BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (1122 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P07648 Exodeoxyribonuclease V gamma chain n=185 Tax=cel... 1251 0.0 UniRef50_C4K849 Exonuclease V, gamma chain with recB and recD: 5... 1093 0.0 UniRef50_A6FE97 Putative exodeoxyribonuclease V n=1 Tax=Moritell... 1082 0.0 UniRef50_D0ICS0 Exodeoxyribonuclease V gamma chain n=1 Tax=Grimo... 1082 0.0 UniRef50_A1SUW0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ps... 1054 0.0 UniRef50_Q2BKD9 Exodeoxyribonuclease V, 125 kDa subunit n=2 Tax=... 1047 0.0 UniRef50_C9PLM5 Exodeoxyribonuclease V gamma chain n=5 Tax=Gamma... 1039 0.0 UniRef50_B6EGE9 Exodeoxyribonuclease V gamma chain n=1 Tax=Aliiv... 1039 0.0 UniRef50_A5GC93 DNA helicase/exodeoxyribonuclease V, gamma subun... 1018 0.0 UniRef50_A4SSU8 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ae... 1011 0.0 UniRef50_C4L7B2 Exodeoxyribonuclease V, gamma subunit n=1 Tax=To... 995 0.0 UniRef50_A1AQY6 DNA helicase/exodeoxyribonuclease V, gamma subun... 974 0.0 UniRef50_Q2LTC9 Exodeoxyribonuclease V gamma chain n=2 Tax=Bacte... 972 0.0 UniRef50_B8CMV5 Exodeoxyribonuclease V, RecC subunit n=1 Tax=She... 967 0.0 UniRef50_A6W0B0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ma... 966 0.0 UniRef50_Q1LST9 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ba... 962 0.0 UniRef50_A3QEU7 Exodeoxyribonuclease V, gamma subunit n=4 Tax=Sh... 961 0.0 UniRef50_Q3IJ13 Exonuclease V, gamma chain with recB and recD: 5... 957 0.0 UniRef50_B8E565 Exodeoxyribonuclease V, gamma subunit n=8 Tax=Sh... 957 0.0 UniRef50_Q080D9 Exodeoxyribonuclease V, gamma subunit n=6 Tax=Sh... 954 0.0 UniRef50_Q3ASJ4 DNA helicase/exodeoxyribonuclease V, gamma subun... 950 0.0 UniRef50_A8ZX08 Exodeoxyribonuclease V, gamma subunit n=1 Tax=De... 949 0.0 UniRef50_Q65UM5 RecC protein n=9 Tax=Gammaproteobacteria RepID=Q... 946 0.0 UniRef50_A1S6U9 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Sh... 944 0.0 UniRef50_Q15V11 DNA helicase/exodeoxyribonuclease V, gamma subun... 941 0.0 UniRef50_Q9CM76 RecC n=1 Tax=Pasteurella multocida RepID=Q9CM76_... 939 0.0 UniRef50_Q3B473 DNA helicase/exodeoxyribonuclease V, gamma subun... 937 0.0 UniRef50_Q12LP5 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ba... 921 0.0 UniRef50_C0N788 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Me... 910 0.0 UniRef50_Q7NQR0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ch... 907 0.0 UniRef50_A4JS85 DNA helicase/exodeoxyribonuclease V, gamma subun... 904 0.0 UniRef50_P44945 Exodeoxyribonuclease V gamma chain n=21 Tax=Haem... 899 0.0 UniRef50_A1TWK1 DNA helicase/exodeoxyribonuclease V, gamma subun... 893 0.0 UniRef50_D2BZV3 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ga... 890 0.0 UniRef50_C1DMH2 Exodeoxyribonuclease V, gamma subunit n=18 Tax=G... 885 0.0 UniRef50_C0QI08 RecC n=1 Tax=Desulfobacterium autotrophicum HRM2... 880 0.0 UniRef50_A3JIN1 Exodeoxyribonuclease V gamma chain n=2 Tax=cellu... 880 0.0 UniRef50_Q7VRF1 Exonuclease V, subunit n=2 Tax=Candidatus Blochm... 873 0.0 UniRef50_Q2SQD5 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ha... 873 0.0 UniRef50_A6VQ90 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ac... 870 0.0 UniRef50_B8FB93 Exodeoxyribonuclease V, gamma subunit n=1 Tax=De... 869 0.0 UniRef50_C5S7Q0 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Al... 865 0.0 UniRef50_B0BTG3 Exodeoxyribonuclease V, gamma subunit n=8 Tax=Pa... 862 0.0 UniRef50_Q0VNI2 Exodeoxyribonuclease V gamma chain n=3 Tax=Gamma... 861 0.0 UniRef50_A4VRQ6 Exodeoxyribonuclease V gamma chain n=1 Tax=Pseud... 860 0.0 UniRef50_Q1N2R1 Exonuclease V gamma subunit n=1 Tax=Bermanella m... 859 0.0 UniRef50_C1D6T7 RecC n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 858 0.0 UniRef50_B9CWC7 Exodeoxyribonuclease V gamma chain n=2 Tax=Actin... 850 0.0 UniRef50_C5JAU6 DNA helicase/exodeoxyribonuclease V, gamma subun... 848 0.0 UniRef50_D0KY94 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ha... 838 0.0 UniRef50_C6MAC3 Exodeoxyribonuclease V, gamma subunit n=3 Tax=Ne... 837 0.0 UniRef50_Q5QUQ7 Exonuclease V gamma subunit n=2 Tax=Idiomarina R... 836 0.0 UniRef50_C7I4N7 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Th... 835 0.0 UniRef50_C7LVF8 Exodeoxyribonuclease V, gamma subunit n=1 Tax=De... 830 0.0 UniRef50_A1KVC5 Exodeoxyribonuclease V n=23 Tax=Neisseria RepID=... 829 0.0 UniRef50_C8R0F3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=De... 820 0.0 UniRef50_Q1QYD4 DNA helicase/exodeoxyribonuclease V, gamma subun... 817 0.0 UniRef50_C5TL47 Exodeoxyribonuclease V, gamma subunit n=3 Tax=Ne... 816 0.0 UniRef50_D0IXL5 Exodeoxyribonuclease V, gamma subunit n=4 Tax=Co... 800 0.0 UniRef50_C4ZM87 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Th... 799 0.0 UniRef50_Q60AZ6 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Me... 793 0.0 UniRef50_B5JRL4 Exodeoxyribonuclease V, gamma subunit n=1 Tax=ga... 791 0.0 UniRef50_Q480N8 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Co... 790 0.0 UniRef50_P57528 Exodeoxyribonuclease V gamma chain n=4 Tax=Buchn... 788 0.0 UniRef50_A1SDB1 DNA helicase/exodeoxyribonuclease V, gamma subun... 779 0.0 UniRef50_C1SHH5 Exodeoxyribonuclease V, gamma subunit n=1 Tax=De... 778 0.0 UniRef50_B1XZ24 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Le... 777 0.0 UniRef50_Q1NSB7 Exodeoxyribonuclease V, RecC subunit n=3 Tax=Pro... 768 0.0 UniRef50_C3X2X1 Exodeoxyribonuclease V n=2 Tax=Oxalobacter formi... 767 0.0 UniRef50_A4B914 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Re... 763 0.0 UniRef50_A1KCB8 DNA helicase, ATP-dependent dsDNA/ssDNA exonucle... 759 0.0 UniRef50_B4RTM0 Exodeoxyribonuclease V, gamma subunit n=3 Tax=Al... 755 0.0 UniRef50_D2PR48 Exodeoxyribonuclease V, gamma subunit n=12 Tax=A... 751 0.0 UniRef50_Q6ANK2 Related to exodeoxyribonuclease V, gamma chain n... 745 0.0 UniRef50_B0TXZ0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Fr... 741 0.0 UniRef50_C8XGX0 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Na... 738 0.0 UniRef50_C4GHY2 Putative uncharacterized protein n=1 Tax=Kingell... 736 0.0 UniRef50_C0ZQ87 Exodeoxyribonuclease V gamma chain n=6 Tax=Coryn... 736 0.0 UniRef50_B5JHV1 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ve... 732 0.0 UniRef50_D1N1Q2 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Vi... 732 0.0 UniRef50_A6DNF3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Le... 731 0.0 UniRef50_Q14GK3 Exodeoxyribonuclease V gamma chain n=16 Tax=Fran... 727 0.0 UniRef50_A1V2S0 Exodeoxyribonuclease V, gamma subunit n=90 Tax=c... 721 0.0 UniRef50_B5EPU5 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ac... 719 0.0 UniRef50_C1ACJ2 Exodeoxyribonuclease V gamma subunit n=1 Tax=Gem... 718 0.0 UniRef50_P96921 Exodeoxyribonuclease V gamma chain n=23 Tax=Myco... 710 0.0 UniRef50_Q8D2T9 RecC protein n=1 Tax=Wigglesworthia glossinidia ... 709 0.0 UniRef50_C7PDT3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ch... 706 0.0 UniRef50_Q89AB4 Exodeoxyribonuclease V gamma chain n=1 Tax=Buchn... 703 0.0 UniRef50_UPI0001C32181 exodeoxyribonuclease V, gamma subunit n=1... 702 0.0 UniRef50_UPI0000E0F593 exodeoxyribonuclease V, gamma subunit n=1... 692 0.0 UniRef50_A9BB00 Possible exodeoxyribonuclease V subunit C 125 kD... 684 0.0 UniRef50_D2U882 Probable exodeoxyribonuclease v, gamma chain pro... 684 0.0 UniRef50_Q3BM39 Exodeoxyribonuclease V, gamma chain n=19 Tax=Xan... 680 0.0 UniRef50_Q7VBK2 Exonuclease V gamma subunit n=1 Tax=Prochlorococ... 672 0.0 UniRef50_C6NU56 Exodeoxyribonuclease V gamma chain n=1 Tax=Acidi... 672 0.0 UniRef50_D0L8X4 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Go... 671 0.0 UniRef50_A2C3H2 Possible exodeoxyribonuclease V subunit C 125 kD... 657 0.0 UniRef50_A2C8A0 Possible exodeoxyribonuclease V gamma chain n=4 ... 649 0.0 UniRef50_C6HV34 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Le... 649 0.0 UniRef50_A6W6P1 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ki... 641 0.0 UniRef50_A5GLW8 Exodeoxyribonuclease V gamma chain n=4 Tax=Synec... 635 e-180 UniRef50_Q3AJ30 Exodeoxyribonuclease V, gamma subunit n=5 Tax=Sy... 619 e-175 UniRef50_Q05XZ7 Possible exodeoxyribonuclease V gamma chain n=1 ... 615 e-174 UniRef50_A3ETY6 Putative exodeoxyribonuclease V, gamma subunit n... 609 e-172 UniRef50_B2I2P5 Exonuclease V gamma subunit n=14 Tax=Acinetobact... 604 e-171 UniRef50_Q6FF17 Exonuclease V, gamma chain n=3 Tax=Acinetobacter... 594 e-168 UniRef50_D0SSR5 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ac... 586 e-165 UniRef50_A5GU99 Exodeoxyribonuclease V gamma chain n=1 Tax=Synec... 571 e-161 UniRef50_D1R7X4 Putative uncharacterized protein n=1 Tax=Parachl... 549 e-154 UniRef50_Q6MFB7 Putative exodeoxyribonuclease V gamma chain n=1 ... 516 e-144 UniRef50_A2BX92 Possible exodeoxyribonuclease V subunit C 125 kD... 502 e-140 UniRef50_A5EWC3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Di... 487 e-135 UniRef50_D0LXX8 Exodeoxyribonuclease V n=1 Tax=Haliangium ochrac... 439 e-121 UniRef50_Q4FSM9 Possible exoribodeoxynuclease V, gamma subunit n... 429 e-118 UniRef50_C9RQA7 Exodeoxyribonuclease V RecC subunit n=1 Tax=Fibr... 418 e-115 UniRef50_C8NCI0 Exoribodeoxynuclease V, gamma subunit n=1 Tax=Ca... 412 e-113 UniRef50_Q057F6 Exodeoxyribonuclease V, g chain n=1 Tax=Buchnera... 374 e-101 UniRef50_A7BX05 Exodeoxyribonuclease V gamma chain n=1 Tax=Beggi... 369 e-100 UniRef50_Q04UR0 Exodeoxyribonuclease V, gamma subunit n=4 Tax=Le... 356 4e-96 UniRef50_Q6A851 Exodeoxyribonuclease V gamma chain n=3 Tax=Propi... 340 2e-91 UniRef50_C0GDI4 ATP-dependent nuclease subunit B n=1 Tax=Dethiob... 333 2e-89 UniRef50_Q9K2F1 Exodeoxyribonuclease V, gamma subunit, putative ... 316 2e-84 UniRef50_B1I494 ATP-dependent helicase/deoxyribonuclease subunit... 313 2e-83 UniRef50_A4J4E2 ATP-dependent helicase/deoxyribonuclease subunit... 311 9e-83 UniRef50_Q3KL55 Exodeoxyribonuclease V gamma chain n=11 Tax=Chla... 310 2e-82 UniRef50_B7JDU3 ATP-dependent helicase/deoxyribonuclease subunit... 309 4e-82 UniRef50_Q18AP0 ATP-dependent helicase/deoxyribonuclease subunit... 308 1e-81 UniRef50_A6LPC3 ATP-dependent helicase/deoxyribonuclease subunit... 306 2e-81 UniRef50_C6CTT5 ATP-dependent nuclease subunit B n=1 Tax=Paeniba... 306 3e-81 UniRef50_Q8ERW6 ATP-dependent helicase/deoxyribonuclease subunit... 305 7e-81 UniRef50_B9E0C6 ATP-dependent helicase/deoxyribonuclease subunit... 305 9e-81 UniRef50_Q0SWW7 ATP-dependent helicase/deoxyribonuclease subunit... 300 2e-79 UniRef50_B0SIS7 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Le... 298 7e-79 UniRef50_A1HTK8 UvrD-like DNA helicase, C terminal n=1 Tax=Therm... 294 1e-77 UniRef50_B2A611 ATP-dependent helicase/deoxyribonuclease subunit... 293 4e-77 UniRef50_B0KDB8 ATP-dependent helicase/deoxyribonuclease subunit... 291 1e-76 UniRef50_Q24WW7 ATP-dependent helicase/deoxyribonuclease subunit... 291 1e-76 UniRef50_UPI0001850BBB ATP-dependent nuclease, subunit B n=1 Tax... 291 1e-76 UniRef50_B8DF43 ATP-dependent helicase/deoxyribonuclease subunit... 290 2e-76 UniRef50_A7GAI7 ATP-dependent helicase/deoxyribonuclease subunit... 288 7e-76 UniRef50_A0AL19 ATP-dependent helicase/deoxyribonuclease subunit... 286 4e-75 UniRef50_A4IKW6 ATP-dependent helicase/deoxyribonuclease subunit... 285 6e-75 UniRef50_Q2RL78 ATP-dependent helicase/deoxyribonuclease subunit... 285 7e-75 UniRef50_B0TDI1 ATP-dependent helicase/deoxyribonuclease subunit... 284 1e-74 UniRef50_A8VW70 Beta-lactamase n=1 Tax=Bacillus selenitireducens... 284 2e-74 UniRef50_A5ZW43 Putative uncharacterized protein n=1 Tax=Ruminoc... 283 4e-74 UniRef50_C0FS44 Putative uncharacterized protein n=2 Tax=Rosebur... 282 5e-74 UniRef50_UPI0001692BDC ATP-dependent nuclease, subunit B n=1 Tax... 281 8e-74 UniRef50_Q67MD4 ATP-dependent helicase/deoxyribonuclease subunit... 281 1e-73 UniRef50_C0Z546 ATP-dependent nuclease subunit B n=1 Tax=Breviba... 279 4e-73 UniRef50_C0EV12 Putative uncharacterized protein n=1 Tax=Eubacte... 279 5e-73 UniRef50_B8I2Y3 ATP-dependent helicase/deoxyribonuclease subunit... 279 5e-73 UniRef50_B6FV68 Putative uncharacterized protein n=1 Tax=Clostri... 278 9e-73 UniRef50_C5RQN7 ATP-dependent nuclease subunit B n=1 Tax=Clostri... 277 1e-72 UniRef50_A6TVN9 ATP-dependent helicase/deoxyribonuclease subunit... 277 2e-72 UniRef50_D2LU04 ATP-dependent nuclease subunit B n=1 Tax=Bacillu... 275 1e-71 UniRef50_UPI00017899D8 ATP-dependent nuclease subunit B n=1 Tax=... 273 2e-71 UniRef50_A8FBR0 ATP-dependent helicase/deoxyribonuclease subunit... 273 4e-71 UniRef50_D1BPP0 ATP-dependent nuclease subunit B-like protein n=... 272 7e-71 UniRef50_B6G1B7 Putative uncharacterized protein n=1 Tax=Clostri... 270 2e-70 UniRef50_C6JEU6 Putative uncharacterized protein n=1 Tax=Ruminoc... 268 1e-69 UniRef50_C1RHS2 Exonuclease V gamma subunit n=1 Tax=Cellulomonas... 264 1e-68 UniRef50_C9KJP7 ATP-dependent nuclease subunit B n=1 Tax=Mitsuok... 263 3e-68 UniRef50_C6IZE2 ATP-dependent nuclease subunit B n=1 Tax=Paeniba... 261 1e-67 UniRef50_B1HN89 ATP-dependent helicase/deoxyribonuclease subunit... 260 2e-67 UniRef50_C7GAA1 ATP-dependent nuclease n=1 Tax=Roseburia intesti... 259 5e-67 UniRef50_B7AS97 Putative uncharacterized protein n=1 Tax=Bactero... 256 3e-66 UniRef50_UPI00016C0037 ATP-dependent nuclease subunit B n=1 Tax=... 256 5e-66 UniRef50_C9LTM7 ATP-dependent nuclease subunit B n=1 Tax=Selenom... 255 6e-66 UniRef50_C6LH76 ATP-dependent nuclease subunit B n=1 Tax=Bryante... 255 8e-66 UniRef50_B0NWV1 Putative uncharacterized protein n=2 Tax=Clostri... 254 1e-65 UniRef50_C4G1J6 Putative uncharacterized protein n=1 Tax=Abiotro... 254 2e-65 UniRef50_C0CPC7 Putative uncharacterized protein n=1 Tax=Blautia... 253 2e-65 UniRef50_B0NKJ8 Putative uncharacterized protein n=8 Tax=Clostri... 251 1e-64 UniRef50_Q03D70 ATP-dependent helicase/deoxyribonuclease subunit... 251 1e-64 UniRef50_UPI00019738F1 ATP-dependent nuclease subunit B n=2 Tax=... 251 2e-64 UniRef50_C4Z990 AddB n=1 Tax=Eubacterium rectale ATCC 33656 RepI... 251 2e-64 UniRef50_B9XFA2 ATP-dependentnuclease subunitB n=1 Tax=bacterium... 250 2e-64 UniRef50_A9KTE7 ATP-dependent helicase/deoxyribonuclease subunit... 250 3e-64 UniRef50_B0PD61 Putative uncharacterized protein n=1 Tax=Anaerot... 248 7e-64 UniRef50_Q0AXV2 DNA helicase/exodeoxyribonuclease V, subunit B n... 248 8e-64 UniRef50_Q03NA6 ATP-dependent helicase/deoxyribonuclease subunit... 244 1e-62 UniRef50_A8SJB4 Putative uncharacterized protein n=1 Tax=Parvimo... 244 1e-62 UniRef50_C9LAG6 ATP-dependent nuclease subunit B n=1 Tax=Blautia... 244 1e-62 UniRef50_C4V2E4 ATP-dependent deoxyribonuclease subunit B n=2 Ta... 243 3e-62 UniRef50_B1YKM7 ATP-dependent helicase/deoxyribonuclease subunit... 243 3e-62 UniRef50_C8PVF1 Putative exoribodeoxynuclease V, gamma subunit n... 241 2e-61 UniRef50_A5ZAT7 Putative uncharacterized protein n=1 Tax=Eubacte... 239 7e-61 UniRef50_C0WLM6 ATP-dependent deoxyribonuclease, subunit B n=3 T... 237 2e-60 UniRef50_Q4L4Y2 ATP-dependent helicase/deoxyribonuclease subunit... 234 1e-59 UniRef50_C4FTG6 Putative uncharacterized protein n=1 Tax=Catonel... 233 3e-59 UniRef50_Q836J9 ATP-dependent helicase/deoxyribonuclease subunit... 233 4e-59 UniRef50_A7VXI0 Putative uncharacterized protein n=1 Tax=Clostri... 232 8e-59 UniRef50_C9LQY6 Putative ATP-dependent nuclease subunit B n=1 Ta... 228 8e-58 UniRef50_B7J2J0 Exodeoxyribonuclease V, gamma chain n=26 Tax=Bor... 228 1e-57 UniRef50_C0CXR8 Putative uncharacterized protein n=2 Tax=Clostri... 228 1e-57 UniRef50_A8STZ1 Putative uncharacterized protein n=1 Tax=Coproco... 226 3e-57 UniRef50_B1C9D7 Putative uncharacterized protein n=1 Tax=Anaerof... 226 4e-57 UniRef50_UPI0001C37CA1 ATP-dependent nuclease subunit B n=1 Tax=... 226 5e-57 UniRef50_A8U8N1 Exonuclease RexB n=1 Tax=Carnobacterium sp. AT7 ... 225 7e-57 UniRef50_A6NVW2 Putative uncharacterized protein n=1 Tax=Bactero... 225 8e-57 UniRef50_D0BK92 Exonuclease RexB n=1 Tax=Granulicatella elegans ... 225 9e-57 UniRef50_Q038V6 ATP-dependent helicase/deoxyribonuclease subunit... 225 9e-57 UniRef50_C4Z483 Putative uncharacterized protein n=1 Tax=Eubacte... 223 4e-56 UniRef50_UPI0001699EF8 Exodeoxyribonuclease V, RecC subunit n=1 ... 223 4e-56 UniRef50_C8NER5 Exonuclease RexB n=1 Tax=Granulicatella adiacens... 219 5e-55 UniRef50_A8RRN9 Putative uncharacterized protein n=1 Tax=Clostri... 218 8e-55 UniRef50_UPI0001BC38B0 ATP-dependent nuclease subunit B n=1 Tax=... 217 1e-54 UniRef50_C9A8J1 Exonuclease RexB n=4 Tax=Enterococcus RepID=C9A8... 214 1e-53 UniRef50_C2EDG9 ATP-dependent deoxyribonuclease, subunit B n=1 T... 214 2e-53 UniRef50_A7VJ44 Putative uncharacterized protein n=1 Tax=Clostri... 213 4e-53 UniRef50_Q1Q1J4 Putative uncharacterized protein n=1 Tax=Candida... 210 2e-52 UniRef50_C4G8W0 Putative uncharacterized protein n=1 Tax=Shuttle... 210 2e-52 UniRef50_C5RAZ7 ATP-dependent deoxyribonuclease, subunit B n=1 T... 208 8e-52 UniRef50_Q04GY8 ATP-dependent helicase/deoxyribonuclease subunit... 207 2e-51 UniRef50_Q38X70 ATP-dependent helicase/deoxyribonuclease subunit... 207 2e-51 UniRef50_C0EHH2 Putative uncharacterized protein n=1 Tax=Clostri... 206 3e-51 UniRef50_B1MZM3 ATP-dependent helicase/deoxyribonuclease subunit... 204 1e-50 UniRef50_B5E4P4 ATP-dependent helicase/deoxyribonuclease subunit... 204 2e-50 UniRef50_A8YVK1 ATP-dependent helicase/deoxyribonuclease subunit... 200 3e-49 UniRef50_Q1WRR9 ATP-dependent helicase/deoxyribonuclease subunit... 199 4e-49 UniRef50_Q9RNX7 RecC1001 (Fragment) n=71 Tax=Bacteria RepID=Q9RN... 197 2e-48 UniRef50_C8PAK3 ATP-dependent exonuclease subunit B n=1 Tax=Lact... 197 2e-48 UniRef50_Q3AA34 ATP-dependent helicase/deoxyribonuclease subunit... 196 4e-48 UniRef50_B2GEY3 ATP-dependent helicase/deoxyribonuclease subunit... 191 2e-46 UniRef50_B9EAN7 ATP-dependent nuclease subunit B n=1 Tax=Macroco... 190 3e-46 UniRef50_Q88U40 ATP-dependent helicase/deoxyribonuclease subunit... 187 1e-45 UniRef50_B2KE91 ATP-dependent nuclease subunit B-like protein n=... 186 6e-45 UniRef50_C7XXL1 ATP-dependent nuclease subunit B n=1 Tax=Lactoba... 185 9e-45 UniRef50_C2BHK2 Putative uncharacterized protein n=1 Tax=Anaeroc... 184 1e-44 UniRef50_Q5M2T6 ATP-dependent helicase/deoxyribonuclease subunit... 182 7e-44 UniRef50_D1PLS4 Putative ATP-dependent nuclease subunit B n=1 Ta... 181 1e-43 UniRef50_A5VHK1 ATP-dependent helicase/deoxyribonuclease subunit... 174 2e-41 UniRef50_A6CDV2 ATP-dependent deoxyribonuclease subunit B n=1 Ta... 174 2e-41 UniRef50_A4W0M6 ATP-dependent helicase/deoxyribonuclease subunit... 171 1e-40 UniRef50_C7RGF8 ATP-dependent nuclease subunit B-like protein n=... 169 7e-40 UniRef50_A2RH76 ATP-dependent helicase/deoxyribonuclease subunit... 167 2e-39 UniRef50_C8SXN2 Exodeoxyribonuclease subunit V gamma (Fragment) ... 164 2e-38 UniRef50_Q1GAB0 ATP-dependent helicase/deoxyribonuclease subunit... 163 4e-38 UniRef50_A3CVM8 ATP-dependent nuclease subunit B-like protein n=... 162 6e-38 UniRef50_B7GQ32 ATP-dependent nuclease subunit B-like protein n=... 160 2e-37 UniRef50_C2KVH9 ATP-dependent deoxyribonuclease subunit B n=1 Ta... 158 1e-36 UniRef50_C5C3C7 ATP-dependent nuclease subunit B-like protein n=... 154 3e-35 UniRef50_B6WA23 Putative uncharacterized protein n=1 Tax=Anaeroc... 153 4e-35 UniRef50_Q02D21 ATP-dependent nuclease subunit B-like protein n=... 150 2e-34 UniRef50_C0WBY1 Predicted protein n=1 Tax=Acidaminococcus sp. D2... 150 3e-34 UniRef50_C5CHH9 ATP-dependent nuclease subunit B-like protein n=... 150 4e-34 UniRef50_D1CD72 UvrD/REP helicase n=1 Tax=Thermobaculum terrenum... 144 3e-32 UniRef50_Q2FUG2 ATP-dependent nuclease subunit B-like n=1 Tax=Me... 143 3e-32 UniRef50_B0MQS6 Putative uncharacterized protein n=1 Tax=Eubacte... 142 8e-32 UniRef50_A9BDV1 UvrD/REP helicase n=44 Tax=Cyanobacteria RepID=A... 140 2e-31 UniRef50_A8LAX0 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria... 140 4e-31 UniRef50_C7QGW9 ATP-dependent DNA helicase PcrA n=8 Tax=Bacteria... 139 5e-31 UniRef50_D2PY24 ATP-dependent nuclease subunit B-like protein n=... 137 3e-30 UniRef50_C6A858 Superfamily I DNA and RNA helicase n=18 Tax=Bifi... 137 3e-30 UniRef50_Q027B8 ATP-dependent nuclease subunit B-like protein n=... 137 4e-30 UniRef50_Q2J6E3 UvrD/REP helicase n=4 Tax=Actinomycetales RepID=... 136 4e-30 UniRef50_D2RKU2 ATP-dependent nuclease subunit B-like protein n=... 136 4e-30 UniRef50_D0JAI1 ATP-dependent DNA helicase n=2 Tax=Blattabacteri... 136 4e-30 UniRef50_UPI00016C0C66 ATP-dependent DNA helicase PcrA n=1 Tax=E... 136 4e-30 UniRef50_C7HSP4 Putative uncharacterized protein n=1 Tax=Anaeroc... 136 5e-30 UniRef50_UPI0001AF5A75 exodeoxyribonuclease V, gamma subunit n=1... 136 5e-30 UniRef50_A5GQG6 UvrD/REP helicase n=18 Tax=Cyanobacteria RepID=A... 136 6e-30 UniRef50_Q11Q08 DNA-dependent ATPase I and helicase II n=1 Tax=C... 135 6e-30 UniRef50_B2RKD8 ATP-dependent DNA helicase n=5 Tax=Bacteroidetes... 135 1e-29 UniRef50_Q3DPK7 Exonuclease RexB (Fragment) n=3 Tax=Streptococcu... 134 2e-29 UniRef50_A4XBE9 ATP-dependent DNA helicase PcrA n=18 Tax=Actinom... 134 2e-29 UniRef50_C0QS88 Putative uncharacterized protein n=1 Tax=Perseph... 134 3e-29 UniRef50_Q6MI36 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio ... 133 4e-29 UniRef50_UPI0001C314BA ATP-dependent nuclease subunit B-like pro... 133 4e-29 UniRef50_B8GFE8 UvrD/REP helicase n=1 Tax=Methanosphaerula palus... 133 4e-29 UniRef50_C7H111 ATP-dependent DNA helicase PcrA n=1 Tax=Eubacter... 133 4e-29 UniRef50_A8SUE8 Putative uncharacterized protein n=4 Tax=Clostri... 133 5e-29 UniRef50_Q8EUN0 ATP-dependent DNA helicase n=1 Tax=Mycoplasma pe... 133 5e-29 UniRef50_A2PDE9 Putative uncharacterized protein (Fragment) n=1 ... 133 5e-29 UniRef50_A1AUN0 ATP-dependent DNA helicase PcrA n=10 Tax=Desulfu... 132 6e-29 UniRef50_A8SI09 Putative uncharacterized protein n=2 Tax=Faecali... 132 7e-29 UniRef50_D2R9Y0 Putative ATP-dependent DNA helicase PcrA n=1 Tax... 132 8e-29 UniRef50_C8WQE2 ATP-dependent nuclease subunit B-like protein n=... 132 9e-29 UniRef50_C5NYN7 ATP-dependent helicase PcrA n=1 Tax=Gemella haem... 132 1e-28 UniRef50_B3E665 UvrD/REP helicase n=1 Tax=Geobacter lovleyi SZ R... 131 2e-28 UniRef50_C4Z8S4 ATP-dependent DNA helicase PcrA n=17 Tax=Firmicu... 130 2e-28 UniRef50_A4XKK0 ATP-dependent DNA helicase PcrA n=2 Tax=Clostrid... 130 4e-28 UniRef50_B0RA37 Nuclease subunit B homolog n=1 Tax=Halobacterium... 130 4e-28 UniRef50_Q8CRT9 ATP-dependent DNA helicase pcrA n=245 Tax=cellul... 129 7e-28 UniRef50_Q6GFF2 ATP-dependent DNA helicase pcrA n=81 Tax=cellula... 129 8e-28 UniRef50_Q04T79 ATP-dependent DNA helicase n=6 Tax=Leptospira Re... 128 1e-27 UniRef50_C1A8M7 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas ... 128 1e-27 UniRef50_Q0AZZ6 ATP-dependent DNA helicase PcrA n=1 Tax=Syntroph... 128 1e-27 UniRef50_C5QUC7 Possible ATP-dependent DNA helicase PcrA (Fragme... 127 2e-27 UniRef50_A9ETX5 ATP-depentend DNA helicase n=1 Tax=Sorangium cel... 127 3e-27 UniRef50_B0TWY9 DNA helicase II n=19 Tax=Francisella RepID=B0TWY... 127 3e-27 UniRef50_D1C5W7 ATP-dependent nuclease subunit B-like protein n=... 126 5e-27 UniRef50_A9F541 ATP-dependent DNA helicase n=1 Tax=Sorangium cel... 126 5e-27 UniRef50_Q21PD1 ATP-dependent DNA helicase Rep n=15 Tax=Gammapro... 126 5e-27 UniRef50_B2GM51 ATP-dependent DNA helicase UvrD1 n=10 Tax=Actino... 126 6e-27 UniRef50_A5TXQ2 Superfamily I ATP-dependent helicase n=15 Tax=Fu... 125 8e-27 UniRef50_C5NXT8 Putative uncharacterized protein n=1 Tax=Gemella... 125 9e-27 UniRef50_P57654 ATP-dependent DNA helicase rep n=4 Tax=Buchnera ... 125 1e-26 UniRef50_Q4JGZ3 ATP-dependent deoxyribonuclease chain-like prote... 124 2e-26 UniRef50_C4G2S8 Putative uncharacterized protein n=1 Tax=Abiotro... 124 2e-26 UniRef50_B0VGK7 Superfamily I DNA and RNA helicases n=1 Tax=Cand... 124 3e-26 UniRef50_B8I5U1 ATP-dependent DNA helicase PcrA n=14 Tax=Firmicu... 123 4e-26 UniRef50_Q2RGX9 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 122 6e-26 UniRef50_D0LJZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum D... 122 7e-26 UniRef50_D1BXF2 ATP-dependent DNA helicase PcrA n=5 Tax=Actinomy... 122 7e-26 UniRef50_Q9CD72 ATP-dependent DNA helicase pcrA n=26 Tax=Actinom... 122 8e-26 UniRef50_A8MLJ7 ATP-dependent DNA helicase PcrA n=3 Tax=Firmicut... 122 8e-26 UniRef50_C1ZCN1 ATP-dependent nuclease, subunit B n=1 Tax=Planct... 122 9e-26 UniRef50_C5VHV2 ATP-dependent DNA helicase PcrA n=20 Tax=Bactero... 122 1e-25 UniRef50_Q83GZ5 ATP-dependent DNA helicase n=2 Tax=Tropheryma wh... 122 1e-25 UniRef50_C6P8R0 ATP-dependent nuclease subunit B-like protein n=... 121 1e-25 UniRef50_A9BJS5 Putative uncharacterized protein n=1 Tax=Petroto... 121 1e-25 UniRef50_B8FP41 ATP-dependent DNA helicase PcrA n=10 Tax=Firmicu... 121 2e-25 UniRef50_B5YF03 ATP-dependent DNA helicase PcrA n=2 Tax=Dictyogl... 121 2e-25 UniRef50_C0WAB3 ATP-dependent DNA helicase pcrA n=1 Tax=Acidamin... 121 2e-25 UniRef50_C1A3F5 ATP-dependent DNA helicase UvrD1 n=31 Tax=Bacter... 121 2e-25 UniRef50_C5BBB0 ATP-dependent DNA helicase Rep, putative n=2 Tax... 120 2e-25 UniRef50_C0R0K3 ATP-dependent DNA helicase n=2 Tax=Brachyspira R... 120 2e-25 UniRef50_A9NHW3 DNA helicase II n=1 Tax=Acholeplasma laidlawii P... 120 3e-25 UniRef50_Q0TN58 ATP-dependent DNA helicase PcrA n=12 Tax=Clostri... 120 3e-25 UniRef50_C3QGR5 ATP-dependent DNA helicase n=23 Tax=Bacteroidale... 120 3e-25 UniRef50_A7VTM6 Putative uncharacterized protein n=1 Tax=Clostri... 120 3e-25 UniRef50_B2KB12 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum... 120 4e-25 UniRef50_D1A297 ATP-dependent DNA helicase PcrA n=3 Tax=Actinomy... 120 4e-25 UniRef50_D1PL59 ATP-dependent DNA helicase n=4 Tax=Ruminococcace... 118 1e-24 UniRef50_A1TNG2 ATP-dependent DNA helicase UvrD n=11 Tax=cellula... 118 1e-24 UniRef50_C8WV10 UvrD/REP helicase n=2 Tax=Alicyclobacillus acido... 118 1e-24 UniRef50_Q018Z5 ATP-dependent DNA helicase (ISS) n=1 Tax=Ostreoc... 118 1e-24 UniRef50_C0VSX9 ATP-dependent DNA helicase n=2 Tax=Corynebacteri... 118 1e-24 UniRef50_C9XK50 ATP-dependent DNA helicase n=5 Tax=Clostridium R... 118 2e-24 UniRef50_B7C8B0 Putative uncharacterized protein n=1 Tax=Eubacte... 118 2e-24 UniRef50_C2CV85 Possible ATP-dependent DNA helicase n=2 Tax=Bifi... 117 2e-24 UniRef50_C1XMD9 ATP-dependent DNA helicase, Rep family n=1 Tax=M... 117 2e-24 UniRef50_B4CU41 UvrD/REP helicase n=1 Tax=Chthoniobacter flavus ... 117 2e-24 UniRef50_D1NAY9 UvrD/REP helicase n=1 Tax=Victivallis vadensis A... 117 2e-24 UniRef50_Q0AHY9 ATP-dependent DNA helicase UvrD n=16 Tax=Betapro... 117 2e-24 UniRef50_C5C915 ATP-dependent DNA helicase PcrA n=7 Tax=Actinomy... 117 3e-24 UniRef50_C3XD55 ATP-dependent DNA helicase n=1 Tax=Helicobacter ... 117 3e-24 UniRef50_C4V2E0 ATP-dependent DNA helicase n=1 Tax=Selenomonas f... 117 3e-24 UniRef50_B1I553 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria... 117 3e-24 UniRef50_B2S250 Rep helicase, single-stranded DNA-dependent ATPa... 117 3e-24 UniRef50_C1ZKV9 DNA/RNA helicase, superfamily I n=1 Tax=Planctom... 117 4e-24 UniRef50_B4VQT2 UvrD/REP helicase subfamily n=6 Tax=Bacteria Rep... 117 4e-24 UniRef50_D2NR24 Superfamily I DNA and RNA helicase n=17 Tax=Bact... 116 6e-24 UniRef50_C8W206 ATP-dependent DNA helicase PcrA n=2 Tax=Clostrid... 115 8e-24 UniRef50_A4RXK7 Predicted protein (Fragment) n=1 Tax=Ostreococcu... 115 9e-24 UniRef50_D0BN23 ATP-dependent DNA helicase PcrA n=5 Tax=Firmicut... 115 9e-24 UniRef50_Q2S550 ATP-dependent DNA helicase pcrA n=2 Tax=Rhodothe... 115 1e-23 UniRef50_A7KV33 PcrA helicase n=1 Tax=Bacillus phage 0305phi8-36... 115 1e-23 UniRef50_B2V7G3 UvrD/REP helicase n=5 Tax=Aquificales RepID=B2V7... 115 1e-23 UniRef50_A9M0G6 ATP-dependent DNA helicase n=38 Tax=Betaproteoba... 115 1e-23 UniRef50_Q5NVY5 ATP-dependent DNA helicase n=2 Tax=Archaea RepID... 114 2e-23 UniRef50_Q67KI7 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 114 2e-23 UniRef50_Q6MAS4 Probable ATP-dependent DNA helicase, mutU n=1 Ta... 114 2e-23 UniRef50_A5GA79 UvrD/REP helicase n=10 Tax=Desulfuromonadales Re... 114 2e-23 UniRef50_B9KXW3 ATP-dependent DNA helicase pcrA n=2 Tax=Thermomi... 114 2e-23 UniRef50_Q256I8 DNA/RNA helicase n=17 Tax=Chlamydiales RepID=Q25... 114 2e-23 UniRef50_P45612 Probable DNA helicase II homolog n=4 Tax=Mollicu... 114 2e-23 UniRef50_C6NVE2 ATP-dependent DNA helicase Rep n=1 Tax=Acidithio... 113 3e-23 UniRef50_A5CU47 ATP-dependent DNA helicase n=4 Tax=Actinobacteri... 113 3e-23 UniRef50_A9GM05 Putative uncharacterized protein n=1 Tax=Sorangi... 113 4e-23 UniRef50_A4IYZ2 ATP-dependent DNA helicase/UvrD/REP helicase n=2... 113 4e-23 UniRef50_D0LIZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum D... 113 4e-23 UniRef50_A0RUT2 Superfamily I helicase n=1 Tax=Cenarchaeum symbi... 113 4e-23 UniRef50_B1C8W2 Putative uncharacterized protein n=1 Tax=Anaerof... 113 4e-23 UniRef50_D2PLA7 UvrD/REP helicase n=1 Tax=Kribbella flavida DSM ... 113 4e-23 UniRef50_Q1PY53 Strongly similar to ATP-dependent DNA helicase n... 113 5e-23 UniRef50_C7N6W8 DNA/RNA helicase, superfamily I n=1 Tax=Slackia ... 113 5e-23 UniRef50_D2RIV6 ATP-dependent DNA helicase PcrA n=6 Tax=Veillone... 113 5e-23 UniRef50_UPI000051001F putative ATP-dependent DNA helicase II n=... 112 6e-23 UniRef50_A9WKU6 DNA helicase II n=2 Tax=Bacteria RepID=A9WKU6_RENSM 112 6e-23 UniRef50_B1GYW6 ATP-dependent UvrD family DNA helicase PcrA n=1 ... 112 7e-23 UniRef50_A5UVF1 ATP-dependent DNA helicase, Rep family n=6 Tax=C... 112 1e-22 UniRef50_C1ZAM6 DNA/RNA helicase, superfamily I n=1 Tax=Planctom... 112 1e-22 UniRef50_B2UQR8 UvrD/REP helicase n=2 Tax=Verrucomicrobiaceae Re... 112 1e-22 UniRef50_A7NGD4 UvrD/REP helicase n=11 Tax=Chloroflexi RepID=A7N... 112 1e-22 UniRef50_B8FBU8 UvrD/REP helicase n=2 Tax=Bacteria RepID=B8FBU8_... 111 1e-22 UniRef50_D1VUE5 ATP-dependent DNA helicase PcrA n=1 Tax=Peptonip... 111 2e-22 UniRef50_P03018 DNA helicase II n=409 Tax=cellular organisms Rep... 110 2e-22 UniRef50_P44804 ATP-dependent DNA helicase rep n=275 Tax=Proteob... 110 2e-22 UniRef50_B9KCT9 ATP-dependent DNA helicase n=1 Tax=Campylobacter... 110 3e-22 UniRef50_C8WTI7 ATP-dependent DNA helicase PcrA n=2 Tax=Alicyclo... 110 3e-22 UniRef50_C7HU69 ATP-dependent DNA helicase PcrA n=2 Tax=Anaeroco... 110 4e-22 UniRef50_C7RHP9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7R... 109 7e-22 UniRef50_A0Q2Q4 ATP-dependent DNA helicase PcrA, putative n=23 T... 109 7e-22 UniRef50_A0M3U3 PcrA-like UvrD/Rep family ATP-dependent DNA heli... 109 7e-22 UniRef50_C6HUX3 Putative ATP-dependent DNA helicase, UvrD/REP fa... 109 8e-22 UniRef50_A9KP66 UvrD/REP helicase n=12 Tax=Bacteria RepID=A9KP66... 108 9e-22 UniRef50_A1BEA2 ATP-dependent DNA helicase PcrA n=2 Tax=Chlorobi... 108 1e-21 UniRef50_Q31JE9 ATP-dependent DNA helicase UvrD n=3 Tax=Gammapro... 108 1e-21 UniRef50_UPI0000E87DAA UvrD/REP helicase n=1 Tax=Methylophilales... 108 1e-21 UniRef50_A6GB18 ATP-dependent DNA helicase PcrA n=1 Tax=Plesiocy... 108 1e-21 UniRef50_Q6MND7 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio ... 108 1e-21 UniRef50_D1YBS2 UvrD/REP helicase n=2 Tax=Propionibacterium acne... 108 1e-21 UniRef50_Q6XYV7 ATP-dependent DNA helicase n=2 Tax=Spiroplasma R... 108 2e-21 UniRef50_C7RA34 Putative uncharacterized protein n=1 Tax=Kangiel... 108 2e-21 UniRef50_A5FDD0 ATP-dependent DNA helicase, Rep family n=2 Tax=F... 108 2e-21 UniRef50_Q98PM4 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma p... 108 2e-21 UniRef50_A8TD22 UvrD/REP helicase n=2 Tax=cellular organisms Rep... 107 2e-21 UniRef50_Q68WT1 DNA helicase II n=17 Tax=Rickettsieae RepID=UVRD... 107 2e-21 UniRef50_B0KVA6 Putative UvrD/REP helicase n=1 Tax=uncultured ca... 107 2e-21 UniRef50_C7NAU4 UvrD/REP helicase n=5 Tax=Fusobacteriaceae RepID... 107 3e-21 UniRef50_A8SMG4 Putative uncharacterized protein n=1 Tax=Parvimo... 107 3e-21 UniRef50_B3EU74 UvrD/REP helicase n=4 Tax=Bacteroidetes RepID=B3... 107 3e-21 UniRef50_Q89A21 ATP-dependent DNA helicase rep n=2 Tax=Buchnera ... 107 4e-21 UniRef50_Q1DAU6 ATP-dependent DNA helicase, UvrD/REP family n=6 ... 106 4e-21 UniRef50_C9M511 ATP-dependent DNA helicase PcrA n=2 Tax=Synergis... 106 4e-21 UniRef50_Q1J014 UvrD/REP helicase n=4 Tax=Deinococci RepID=Q1J01... 106 4e-21 UniRef50_A6DKH4 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa ... 106 5e-21 UniRef50_B0P0N3 Putative uncharacterized protein n=2 Tax=Bacteri... 106 5e-21 UniRef50_B1XW04 UvrD/REP helicase n=41 Tax=Bacteria RepID=B1XW04... 106 5e-21 UniRef50_C1TPS7 DNA/RNA helicase, superfamily I n=1 Tax=Dethiosu... 106 5e-21 UniRef50_D1B9M8 UvrD/REP helicase n=1 Tax=Thermanaerovibrio acid... 106 6e-21 UniRef50_Q3F0Y3 ATP-dependent DNA helicase pcrA n=2 Tax=Bacillus... 106 6e-21 UniRef50_A6VEA1 ATP-dependent DNA helicase Rep n=102 Tax=Proteob... 106 7e-21 UniRef50_C7M3I8 UvrD/REP helicase n=3 Tax=Bacteroidetes RepID=C7... 105 7e-21 UniRef50_B7AA42 UvrD/REP helicase n=1 Tax=Thermus aquaticus Y51M... 105 7e-21 UniRef50_Q600N7 ATP-dependent DNA helicase n=6 Tax=Mycoplasma Re... 105 9e-21 UniRef50_C0QD81 PcrA2 n=2 Tax=Bacteria RepID=C0QD81_DESAH 105 1e-20 UniRef50_A6GG96 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica ... 105 1e-20 UniRef50_B0MU18 Putative uncharacterized protein n=2 Tax=Bactero... 105 1e-20 UniRef50_D1R4U3 Putative uncharacterized protein n=1 Tax=Parachl... 105 1e-20 UniRef50_C8V6U5 DNA helicase and DNA-dependent ATPase (Eurofung)... 105 1e-20 UniRef50_C8WP33 UvrD/REP helicase n=3 Tax=Coriobacteriaceae RepI... 105 1e-20 UniRef50_UPI0001BC375D ATP-dependent DNA helicase n=1 Tax=Butyri... 104 2e-20 UniRef50_D2R6Z4 UvrD/REP helicase n=4 Tax=Planctomycetaceae RepI... 104 2e-20 UniRef50_C6NTI8 ATP-dependent DNA helicase UvrD/PcrA n=2 Tax=Gam... 104 2e-20 UniRef50_C7PL50 UvrD/REP helicase n=1 Tax=Chitinophaga pinensis ... 103 3e-20 UniRef50_C3JBX6 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 103 3e-20 UniRef50_UPI00016B20E8 ATP-dependent DNA helicase PcrA n=1 Tax=c... 103 3e-20 UniRef50_Q3A0S9 ATP-dependent DNA helicase PcrA n=1 Tax=Pelobact... 103 3e-20 UniRef50_Q72IS0 DNA helicase uvrD n=3 Tax=Thermus thermophilus R... 103 3e-20 UniRef50_A1AVZ1 UvrD/REP helicase n=3 Tax=Gammaproteobacteria Re... 103 3e-20 UniRef50_B2A5W4 UvrD/REP helicase n=1 Tax=Natranaerobius thermop... 103 4e-20 UniRef50_B3QYS3 UvrD/REP helicase n=9 Tax=Chlorobiaceae RepID=B3... 103 4e-20 UniRef50_C0R2D4 ATP-dependent DNA helicase n=4 Tax=Brachyspira R... 103 5e-20 UniRef50_C1YL28 DNA/RNA helicase, superfamily I n=2 Tax=Nocardio... 103 6e-20 UniRef50_C9LD15 ATP-dependent DNA helicase PcrA n=1 Tax=Prevotel... 103 6e-20 UniRef50_A6CC22 ATP-dependent DNA helicase n=1 Tax=Planctomyces ... 102 7e-20 UniRef50_B6QHN1 ATP-depentend DNA helicase, putative n=1 Tax=Pen... 102 8e-20 UniRef50_Q7UIR9 ATP-dependent DNA helicase n=2 Tax=Planctomyceta... 102 9e-20 UniRef50_A2QP78 Contig An07c0280, complete genome n=8 Tax=Tricho... 102 1e-19 UniRef50_Q0F272 ATP-dependent DNA helicase Rep n=1 Tax=Mariprofu... 101 2e-19 UniRef50_A7AXS4 Putative uncharacterized protein n=1 Tax=Ruminoc... 101 2e-19 UniRef50_C6D4S8 ATP-dependent DNA helicase PcrA n=46 Tax=Firmicu... 101 2e-19 UniRef50_A1WZS5 ATP-dependent DNA helicase UvrD n=3 Tax=Gammapro... 101 2e-19 UniRef50_D1KF50 SRS2 n=6 Tax=rosids RepID=D1KF50_ARATH 101 2e-19 UniRef50_C4R3W4 DNA helicase and DNA-dependent ATPase n=1 Tax=Pi... 101 2e-19 UniRef50_Q2STJ5 ATP-dependent DNA helicase Rep n=90 Tax=Bacteria... 100 2e-19 UniRef50_C1XZD7 DNA/RNA helicase, superfamily I n=1 Tax=Meiother... 100 2e-19 UniRef50_Q1DC55 ATP-dependent DNA helicase PcrA n=2 Tax=Cystobac... 100 2e-19 UniRef50_A6UNC7 UvrD/REP helicase n=1 Tax=Methanococcus vannieli... 100 3e-19 UniRef50_Q5PB91 DNA helicase II n=20 Tax=Rickettsiales RepID=Q5P... 100 3e-19 UniRef50_Q11GU4 ATP-dependent DNA helicase, Rep family n=53 Tax=... 100 3e-19 UniRef50_C9LR66 ATP-dependent DNA helicase PcrA n=1 Tax=Dialiste... 100 3e-19 UniRef50_D1ACX8 UvrD/REP helicase n=2 Tax=Streptosporangineae Re... 100 4e-19 UniRef50_B4U5U9 UvrD/REP helicase n=1 Tax=Hydrogenobaculum sp. Y... 100 4e-19 UniRef50_B0MNA1 Putative uncharacterized protein n=3 Tax=Clostri... 100 4e-19 UniRef50_B2S4R5 DNA helicase II n=3 Tax=Treponema RepID=B2S4R5_T... 100 4e-19 UniRef50_B3PJ81 Putative uncharacterized protein n=1 Tax=Cellvib... 100 4e-19 UniRef50_Q1CRC0 DNA helicase II n=13 Tax=Helicobacter RepID=Q1CR... 100 4e-19 UniRef50_C2KR35 ATP-dependent DNA helicase n=3 Tax=Mobiluncus Re... 100 4e-19 UniRef50_B2A859 ATP-dependent nuclease subunit B-like protein n=... 100 5e-19 UniRef50_B0RZ36 ATP-dependent DNA helicase n=21 Tax=Bacteria Rep... 100 5e-19 UniRef50_C3RQ43 ATP-dependent DNA helicase n=4 Tax=Bacteria RepI... 100 6e-19 UniRef50_UPI0001C314BB UvrD/REP helicase n=1 Tax=Conexibacter wo... 100 6e-19 UniRef50_B1XR07 Putative uncharacterized protein n=1 Tax=Synecho... 99 7e-19 UniRef50_C0QC97 PcrA1 n=1 Tax=Desulfobacterium autotrophicum HRM... 99 7e-19 UniRef50_B1VFC4 Putative ATP-dependent DNA helicase II n=1 Tax=C... 99 1e-18 UniRef50_C2L0R7 ATP-dependent DNA helicase PcrA n=1 Tax=Oribacte... 99 1e-18 UniRef50_C6P8R1 UvrD/REP helicase n=1 Tax=Thermoanaerobacterium ... 98 2e-18 UniRef50_C3LBP3 ATP-dependent DNA helicase, UvrD/REP family n=82... 98 2e-18 UniRef50_Q28NL8 ATP-dependent DNA helicase, Rep family n=11 Tax=... 98 2e-18 UniRef50_B9X9R1 UvrD/REP helicase n=1 Tax=bacterium Ellin514 Rep... 98 2e-18 UniRef50_A2F783 UvrD/REP helicase family protein n=1 Tax=Trichom... 98 2e-18 UniRef50_C8XDJ8 ATP-dependent DNA helicase PcrA n=2 Tax=Actinomy... 98 2e-18 UniRef50_A6TQ92 UvrD/REP helicase n=2 Tax=Alkaliphilus RepID=A6T... 98 2e-18 UniRef50_A8RAD6 Putative uncharacterized protein n=1 Tax=Eubacte... 98 2e-18 UniRef50_B2UPY5 UvrD/REP helicase n=2 Tax=Verrucomicrobia RepID=... 97 2e-18 UniRef50_B2A098 UvrD/REP helicase n=3 Tax=Verrucomicrobia RepID=... 97 3e-18 UniRef50_C5VUD6 UvrD/REP helicase n=1 Tax=Clostridium phage D-18... 97 3e-18 UniRef50_C4Y181 Putative uncharacterized protein n=1 Tax=Clavisp... 97 3e-18 UniRef50_D0L0Z4 UvrD/REP helicase n=1 Tax=Halothiobacillus neapo... 97 3e-18 UniRef50_B5YHS6 ATP-dependent DNA helicase PcrA n=1 Tax=Thermode... 97 4e-18 UniRef50_Q6MFN4 Related to ATP-dependent DNA helicase n=7 Tax=So... 97 4e-18 UniRef50_C8WBZ1 UvrD/REP helicase n=7 Tax=Alphaproteobacteria Re... 97 5e-18 UniRef50_B4UKQ6 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID... 97 5e-18 UniRef50_A0LDC5 ATP-dependent DNA helicase, Rep family n=1 Tax=M... 97 5e-18 UniRef50_C0A4D3 ATP-dependent DNA helicase n=1 Tax=Opitutaceae b... 97 5e-18 UniRef50_Q0SMP9 Rep helicase, single-stranded DNA-dependent ATPa... 97 5e-18 UniRef50_C4XGR7 ATP-dependent DNA helicase n=4 Tax=Desulfovibrio... 96 6e-18 UniRef50_Q1IVP8 ATP-dependent DNA helicase, Rep family n=2 Tax=B... 96 7e-18 UniRef50_Q2S4M5 Probable ATP-dependent DNA helicase n=1 Tax=Sali... 96 7e-18 UniRef50_C6CW81 UvrD/REP helicase n=2 Tax=Bacillales RepID=C6CW8... 96 8e-18 UniRef50_Q8D2T2 UvrD protein n=1 Tax=Wigglesworthia glossinidia ... 96 8e-18 UniRef50_Q1D938 Putative uncharacterized protein n=2 Tax=Cystoba... 96 9e-18 UniRef50_A8R903 Putative uncharacterized protein n=2 Tax=Erysipe... 96 9e-18 UniRef50_D2PLA6 UvrD/REP helicase n=2 Tax=Nocardioidaceae RepID=... 96 1e-17 UniRef50_A5HZM6 ATP-dependent DNA helicase n=4 Tax=Clostridiales... 96 1e-17 UniRef50_Q6ZHK2 Os07g0492100 protein n=4 Tax=Poaceae RepID=Q6ZHK... 95 1e-17 UniRef50_Q67LG5 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 95 2e-17 UniRef50_C0GCZ6 ATP-dependent nuclease subunit B-like protein n=... 95 2e-17 UniRef50_Q82SW8 Putative uncharacterized protein n=1 Tax=Nitroso... 95 2e-17 UniRef50_A5I1P6 ATP-dependent DNA helicase n=14 Tax=Clostridium ... 94 2e-17 UniRef50_B5VVV9 ATP-dependent nuclease subunit B-like protein n=... 94 2e-17 UniRef50_B1AJE0 ATP-dependent DNA helicase PcrA n=15 Tax=Ureapla... 94 3e-17 UniRef50_Q9S3U7 Rep helicase n=2 Tax=Gammaproteobacteria RepID=Q... 94 3e-17 UniRef50_C7MBM9 DNA/RNA helicase, superfamily I n=2 Tax=Actinomy... 94 3e-17 UniRef50_C7MAK0 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 94 4e-17 UniRef50_C7QE44 UvrD/REP helicase n=1 Tax=Catenulispora acidiphi... 94 4e-17 UniRef50_A0LFK0 ATP-dependent DNA helicase, Rep family n=1 Tax=S... 94 5e-17 UniRef50_Q4A5L9 Atp-dependent helicase n=2 Tax=Mycoplasma synovi... 93 5e-17 UniRef50_B7IGH4 Putative uncharacterized protein n=1 Tax=Thermos... 93 6e-17 UniRef50_Q4FPM1 DNA helicase II n=5 Tax=Bacteria RepID=Q4FPM1_PELUB 93 6e-17 UniRef50_Q7NB99 UvrD n=1 Tax=Mycoplasma gallisepticum RepID=Q7NB... 93 7e-17 UniRef50_C1E652 ATP-dependent DNA helicase n=2 Tax=Micromonas Re... 92 8e-17 UniRef50_B6V2U6 Gp34.33 n=3 Tax=Bacillus phage SPO1 RepID=B6V2U6... 92 8e-17 UniRef50_A2ST32 ATP-dependent nuclease subunit B-like protein n=... 92 1e-16 UniRef50_B5K795 UvrD/REP helicase n=5 Tax=Rhodobacterales RepID=... 92 1e-16 UniRef50_UPI0001C37867 ATP-dependent DNA helicase PcrA n=1 Tax=R... 92 1e-16 UniRef50_UPI0001699040 hypothetical protein Epers_04977 n=1 Tax=... 92 1e-16 UniRef50_D1YBS1 UvrD/REP helicase n=3 Tax=Propionibacterium acne... 92 1e-16 UniRef50_Q6AFN3 ATP-dependent DNA helicase n=4 Tax=Actinobacteri... 92 2e-16 UniRef50_UPI0001C3187F UvrD/REP helicase n=1 Tax=Conexibacter wo... 92 2e-16 UniRef50_B2GL30 UvrD/Rep helicase family protein n=1 Tax=Kocuria... 92 2e-16 UniRef50_B9NIQ2 Predicted protein n=1 Tax=Populus trichocarpa Re... 92 2e-16 UniRef50_O66983 ATP-dependent DNA helicase REP n=3 Tax=Aquificac... 92 2e-16 UniRef50_B2WB64 ATP-dependent DNA helicase pcrA n=2 Tax=Pleospor... 91 2e-16 UniRef50_A6WGC7 ATP-dependent nuclease subunit B-like n=1 Tax=Ki... 91 2e-16 UniRef50_Q331U3 Putative ATP-dependent DNA helicase n=1 Tax=Clos... 91 2e-16 UniRef50_A5EW07 DNA helicase UvrD n=2 Tax=Dichelobacter nodosus ... 91 2e-16 UniRef50_A8STY9 Putative uncharacterized protein n=1 Tax=Coproco... 91 2e-16 UniRef50_Q2IGD2 Putative uncharacterized protein n=3 Tax=Anaerom... 91 2e-16 UniRef50_UPI0001C31915 UvrD/REP helicase n=1 Tax=Conexibacter wo... 91 3e-16 UniRef50_B2A3D2 UvrD/REP helicase n=1 Tax=Natranaerobius thermop... 91 3e-16 UniRef50_A5EWK9 DNA helicase II n=1 Tax=Dichelobacter nodosus VC... 91 3e-16 UniRef50_B4S6V4 UvrD/REP helicase n=2 Tax=Bacteroidetes/Chlorobi... 90 3e-16 UniRef50_Q2GE51 Helicase, UvrD/Rep family n=2 Tax=Neorickettsia ... 90 3e-16 UniRef50_C2ME74 ATP-dependent DNA helicase PcrA n=1 Tax=Porphyro... 90 4e-16 UniRef50_B3QYG2 UvrD/REP helicase n=1 Tax=Chloroherpeton thalass... 90 4e-16 UniRef50_Q2SPC8 Superfamily I DNA and RNA helicase n=4 Tax=Gamma... 90 4e-16 UniRef50_D2R5I6 UvrD/REP helicase n=1 Tax=Pirellula staleyi DSM ... 90 4e-16 UniRef50_C9RKG0 UvrD/REP helicase n=1 Tax=Fibrobacter succinogen... 90 4e-16 UniRef50_B0RZV9 ATP-dependent DNA helicase n=2 Tax=Finegoldia ma... 90 5e-16 UniRef50_C5TB61 UvrD/REP helicase n=3 Tax=cellular organisms Rep... 90 5e-16 UniRef50_A3YTS6 ATP-depentend DNA helicase n=1 Tax=Synechococcus... 90 5e-16 UniRef50_Q123W9 UvrD/REP helicase n=16 Tax=cellular organisms Re... 90 6e-16 UniRef50_C1V6P7 ATP-dependent exonuclease V beta subunit, helica... 90 6e-16 UniRef50_Q6BW47 DEHA2B14410p n=3 Tax=Saccharomycetaceae RepID=Q6... 90 6e-16 UniRef50_B6BHP5 Putative uncharacterized protein n=1 Tax=Campylo... 90 6e-16 UniRef50_A7IDD4 UvrD/REP helicase n=3 Tax=Proteobacteria RepID=A... 89 7e-16 UniRef50_B6IP09 UvrD n=8 Tax=cellular organisms RepID=B6IP09_RHOCS 89 8e-16 UniRef50_C6V4L3 DNA helicase II, UvrD/Rep family, N-terminal n=4... 89 9e-16 UniRef50_C1F7R1 ATP-dependent DNA helicase, UvrD/REP family n=1 ... 89 9e-16 UniRef50_Q2S1K7 Putative uncharacterized protein n=1 Tax=Salinib... 89 1e-15 UniRef50_A4REL5 Putative uncharacterized protein n=1 Tax=Magnapo... 89 1e-15 UniRef50_A6NZ65 Putative uncharacterized protein n=1 Tax=Bactero... 89 1e-15 UniRef50_A1SGT7 UvrD/REP helicase n=1 Tax=Nocardioides sp. JS614... 89 1e-15 UniRef50_Q8L1N1 DNA helicase (Fragment) n=1 Tax=Buchnera aphidic... 89 1e-15 UniRef50_C9RM93 UvrD/REP helicase n=1 Tax=Fibrobacter succinogen... 88 2e-15 UniRef50_Q2SKI4 UvrD/REP helicase family protein n=1 Tax=Hahella... 88 2e-15 UniRef50_UPI000050F875 UvrD/REP helicase n=1 Tax=Brevibacterium ... 88 2e-15 UniRef50_Q2RLV0 UvrD/REP helicase n=2 Tax=cellular organisms Rep... 88 2e-15 UniRef50_A8HYL6 DNA helicase II n=8 Tax=Rhizobiales RepID=A8HYL6... 88 2e-15 UniRef50_C5MA33 Predicted protein n=3 Tax=Candida RepID=C5MA33_C... 88 2e-15 UniRef50_UPI000169433B UvrD/REP helicase n=1 Tax=Paenibacillus l... 88 2e-15 UniRef50_A6BB03 ATP-dependent DNA helicase rep (Fragment) n=3 Ta... 88 2e-15 UniRef50_Q9K8M6 ATP-dependent nuclease subunit A n=1 Tax=Bacillu... 88 2e-15 UniRef50_C4Z7Y1 DNA helicase II / ATP-dependent DNA helicase Pcr... 87 3e-15 UniRef50_D2MLK1 DNA helicase, UvrD/REP type n=1 Tax=Candidatus P... 87 3e-15 UniRef50_C0ERA8 Putative uncharacterized protein n=1 Tax=Neisser... 87 3e-15 UniRef50_A9WPI8 ATP-dependent DNA helicase n=1 Tax=Renibacterium... 87 3e-15 UniRef50_B9XNK2 UvrD/REP helicase n=2 Tax=Verrucomicrobiales Rep... 87 3e-15 UniRef50_C1SJ11 DNA/RNA helicase, superfamily I n=1 Tax=Denitrov... 87 3e-15 UniRef50_A6GVZ8 Putative uncharacterized protein n=3 Tax=Flavoba... 87 3e-15 UniRef50_UPI0001788A90 UvrD/REP helicase n=1 Tax=Geobacillus sp.... 87 4e-15 UniRef50_A7VJ43 Putative uncharacterized protein n=1 Tax=Clostri... 87 4e-15 UniRef50_A6LK37 Putative uncharacterized protein n=1 Tax=Thermos... 87 4e-15 UniRef50_C0FWK5 Putative uncharacterized protein n=1 Tax=Rosebur... 87 4e-15 UniRef50_D0RN21 ATP-dependent DNA helicase PcrA n=1 Tax=alpha pr... 87 4e-15 UniRef50_C2M7M3 Putative uncharacterized protein n=1 Tax=Capnocy... 87 5e-15 UniRef50_A9KRX8 UvrD/REP helicase n=10 Tax=Bacteria RepID=A9KRX8... 87 5e-15 UniRef50_D1JDB4 Putative ATP-dependent DNA helicase n=1 Tax=uncu... 87 5e-15 UniRef50_C0R270 ATP-dependent nuclease subunit B n=3 Tax=Brachys... 87 5e-15 UniRef50_D1X726 UvrD/REP helicase n=22 Tax=Streptomyces RepID=D1... 86 6e-15 UniRef50_A7HBX8 UvrD/REP helicase n=7 Tax=Cystobacterineae RepID... 86 6e-15 UniRef50_C8P127 ATP-dependent DNA helicase PcrA n=1 Tax=Erysipel... 86 6e-15 UniRef50_B3DUG1 ATP-dependent DNA helicase UvrD/PcrA n=1 Tax=Met... 86 7e-15 UniRef50_A9H0P3 UvrD/REP helicase n=3 Tax=Alphaproteobacteria Re... 86 7e-15 UniRef50_Q2RL77 ATP-dependent helicase/nuclease subunit A n=2 Ta... 86 7e-15 UniRef50_C7M335 UvrD/REP helicase n=1 Tax=Acidimicrobium ferroox... 86 7e-15 UniRef50_Q6C4F2 YALI0E27269p n=1 Tax=Yarrowia lipolytica RepID=Q... 86 7e-15 UniRef50_Q30SL2 UvrD/REP helicase n=12 Tax=Epsilonproteobacteria... 86 9e-15 UniRef50_D2MPE9 Putative ATP-dependent helicase PcrA n=1 Tax=Bul... 86 9e-15 UniRef50_Q3A3V5 DNA helicase/exodeoxyribonuclease V, subunit B n... 85 1e-14 UniRef50_A0QK57 Superfamily protein I DNA and RNA helicases n=3 ... 85 1e-14 UniRef50_Q30TG3 UvrD/REP helicase n=8 Tax=Epsilonproteobacteria ... 85 1e-14 UniRef50_D1ACM7 UvrD/REP helicase n=1 Tax=Thermomonospora curvat... 85 1e-14 UniRef50_C8WI10 UvrD/REP helicase n=3 Tax=Bacteria RepID=C8WI10_... 85 1e-14 UniRef50_B2IQB2 DNA-dependent ATPase I and helicase II n=4 Tax=B... 85 1e-14 UniRef50_B0NBE0 Putative uncharacterized protein n=9 Tax=Clostri... 85 1e-14 UniRef50_A3EU22 Putative ATP-dependent DNA helicase, UvrD/REP fa... 85 1e-14 UniRef50_O31626 Putative ATP-dependent DNA helicase yjcD n=3 Tax... 85 1e-14 UniRef50_C1D2V9 Putative ATP-dependent nuclease, subunit B (AddB... 85 1e-14 UniRef50_Q98PF5 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma p... 85 1e-14 UniRef50_UPI000023F08A hypothetical protein FG08405.1 n=1 Tax=Gi... 84 2e-14 UniRef50_A8ZYJ7 UvrD/REP helicase n=1 Tax=Desulfococcus oleovora... 84 2e-14 UniRef50_A8ZXL9 UvrD/REP helicase n=1 Tax=Desulfococcus oleovora... 84 3e-14 UniRef50_B3E1Z6 UvrD/REP helicase n=3 Tax=Geobacter RepID=B3E1Z6... 84 3e-14 UniRef50_D1U819 UvrD/REP helicase n=1 Tax=Desulfovibrio aespoeen... 84 3e-14 UniRef50_C0ECE2 Putative uncharacterized protein n=1 Tax=Clostri... 84 3e-14 UniRef50_UPI00016C5306 ATP-dependent DNA helicase n=2 Tax=Gemmat... 84 3e-14 UniRef50_B9ZQQ0 UvrD/REP helicase n=1 Tax=Thioalkalivibrio sp. K... 84 3e-14 UniRef50_UPI0001C42BC3 ATP-dependent DNA helicase n=1 Tax=Bacill... 84 3e-14 UniRef50_C7MP63 DNA/RNA helicase, superfamily I n=6 Tax=Coriobac... 84 3e-14 UniRef50_B3QF13 UvrD/REP helicase n=9 Tax=Rhizobiales RepID=B3QF... 84 3e-14 UniRef50_C0W6Z4 Possible UvrD/REP helicase n=1 Tax=Actinomyces u... 84 4e-14 UniRef50_C1F3E1 Putative uncharacterized protein n=1 Tax=Acidoba... 84 4e-14 UniRef50_Q6FLH1 Strain CBS138 chromosome L complete sequence n=1... 84 4e-14 UniRef50_C7QE35 UvrD/REP helicase n=7 Tax=Actinomycetales RepID=... 84 4e-14 UniRef50_D0LEA2 UvrD/REP helicase n=3 Tax=Corynebacterineae RepI... 84 4e-14 UniRef50_A7NRM2 UvrD/REP helicase n=2 Tax=Roseiflexus RepID=A7NR... 84 5e-14 UniRef50_A7Z3H2 YjcD n=3 Tax=Bacillus RepID=A7Z3H2_BACA2 84 5e-14 UniRef50_B3PNG5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma ar... 83 6e-14 UniRef50_A7HKZ3 UvrD/REP helicase n=4 Tax=Thermotogaceae RepID=A... 83 6e-14 UniRef50_A6BJS6 Putative uncharacterized protein n=1 Tax=Dorea l... 83 6e-14 UniRef50_C8WGH2 ATP-dependent nuclease subunit B-like protein n=... 83 6e-14 UniRef50_A7HKE8 Putative uncharacterized protein n=1 Tax=Fervido... 83 6e-14 UniRef50_A1VZC5 ATP-dependent DNA helicase, putative n=30 Tax=Ep... 83 6e-14 UniRef50_UPI0001AF17D7 superfamily I DNA/RNA helicase n=1 Tax=St... 83 6e-14 UniRef50_Q3JCF0 DNA helicase/exodeoxyribonuclease V, subunit B n... 83 7e-14 UniRef50_C5DG97 KLTH0D03498p n=1 Tax=Lachancea thermotolerans CB... 83 7e-14 UniRef50_Q0EW02 DNA helicase II n=1 Tax=Mariprofundus ferrooxyda... 83 7e-14 UniRef50_B6K032 ATP-dependent DNA helicase srs2 n=1 Tax=Schizosa... 83 8e-14 UniRef50_C5E0S5 ZYRO0G15224p n=1 Tax=Zygosaccharomyces rouxii Re... 83 8e-14 UniRef50_UPI000050F878 superfamily I DNA/RNA helicase n=1 Tax=Br... 83 8e-14 UniRef50_C6LEN7 ATP-dependent helicase PcrA n=2 Tax=Clostridiale... 83 8e-14 UniRef50_A6VFA5 UvrD/REP helicase n=2 Tax=Methanococcus maripalu... 82 9e-14 UniRef50_B5CL82 Putative uncharacterized protein n=3 Tax=Clostri... 82 9e-14 UniRef50_UPI000196B4E1 hypothetical protein CATMIT_00993 n=1 Tax... 82 9e-14 UniRef50_C8XJ56 UvrD/REP helicase n=1 Tax=Nakamurella multiparti... 82 1e-13 UniRef50_A5DZQ5 Putative uncharacterized protein n=1 Tax=Loddero... 82 1e-13 UniRef50_A7HA18 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID... 82 1e-13 UniRef50_C1ZK16 ATP-dependent exonuclease V beta subunit, helica... 82 1e-13 UniRef50_B2A7J4 DNA polymerase III, epsilon subunit n=1 Tax=Natr... 82 1e-13 UniRef50_B8GJD7 UvrD/REP helicase n=1 Tax=Methanosphaerula palus... 82 1e-13 UniRef50_A4XDF1 UvrD/REP helicase n=6 Tax=Actinomycetales RepID=... 82 1e-13 UniRef50_Q10213 ATP-dependent DNA helicase srs2 n=1 Tax=Schizosa... 82 1e-13 UniRef50_C6P6S9 Putative uncharacterized protein n=1 Tax=Siderox... 82 1e-13 UniRef50_A5HYY0 ATP-dependent helicase/nuclease subunit A n=11 T... 82 1e-13 UniRef50_B7GLR0 Putative uncharacterized protein n=1 Tax=Anoxyba... 82 1e-13 UniRef50_Q029V8 ATP-dependent DNA helicase, Rep family n=1 Tax=C... 82 2e-13 UniRef50_B5GJP0 ATP-dependent DNA helicase n=20 Tax=Streptomyces... 82 2e-13 UniRef50_A0PR94 ATP-dependent DNA helicase n=12 Tax=Mycobacteriu... 82 2e-13 UniRef50_D0MDM9 UvrD/REP helicase n=1 Tax=Rhodothermus marinus D... 82 2e-13 UniRef50_UPI0001C41A07 ATP-dependent DNA helicase UvrD/REP famil... 82 2e-13 UniRef50_B1VAQ4 ATP-dependent DNA helicase n=1 Tax=Candidatus Ph... 82 2e-13 UniRef50_Q9K917 ATP-dependent DNA helicase n=1 Tax=Bacillus halo... 81 2e-13 UniRef50_B1VFC7 Putative ATP-dependent DNA helicase II n=2 Tax=C... 81 2e-13 UniRef50_P12954 ATP-dependent DNA helicase SRS2 n=7 Tax=Saccharo... 81 2e-13 UniRef50_Q2S575 ATP-dependent DNA helicase n=2 Tax=Rhodothermace... 81 2e-13 UniRef50_C5V6X1 DNA helicase/exodeoxyribonuclease V, subunit B n... 81 2e-13 UniRef50_D1YX62 Putative ATP-dependent DNA helicase n=1 Tax=Meth... 81 3e-13 UniRef50_C8PEY8 Putative uncharacterized protein n=1 Tax=Campylo... 81 3e-13 UniRef50_A7VD84 Putative uncharacterized protein n=2 Tax=Clostri... 81 3e-13 UniRef50_C0QTS0 Putative UvrD/REP helicase n=1 Tax=Persephonella... 81 3e-13 UniRef50_Q189U3 Putative ATP-dependent DNA helicase n=8 Tax=Clos... 80 3e-13 UniRef50_C6LFT8 ATP-dependent DNA helicase PcrA n=3 Tax=Clostrid... 80 4e-13 UniRef50_Q6KHF3 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mo... 80 4e-13 UniRef50_A8NTH7 Putative uncharacterized protein n=1 Tax=Coprino... 80 4e-13 UniRef50_B9WE90 ATP-dependent DNA helicase, putative n=1 Tax=Can... 80 4e-13 UniRef50_B7GPZ7 UvrD/REP helicase n=4 Tax=Bifidobacterium longum... 80 4e-13 UniRef50_D1XU37 UvrD/REP helicase n=3 Tax=Actinomycetales RepID=... 80 4e-13 UniRef50_D1J8P0 ATP-dependent helicase n=1 Tax=Mycoplasma homini... 80 5e-13 UniRef50_C0W0T5 ATP-dependent DNA helicase (UvrD/REP) n=1 Tax=Ac... 80 5e-13 UniRef50_UPI0001C352F6 UvrD/REP helicase n=1 Tax=Clostridium hat... 80 5e-13 UniRef50_Q72AD4 Putative uncharacterized protein n=3 Tax=Desulfo... 80 5e-13 UniRef50_B0SSS8 ATP-dependent DNA helicase PcrA n=6 Tax=Leptospi... 80 5e-13 UniRef50_B2UU61 Rep helicase, single-stranded DNA-dependent ATPa... 80 5e-13 UniRef50_B8FXD7 ATP-dependent helicase/nuclease subunit A n=2 Ta... 80 5e-13 UniRef50_Q18AN9 ATP-dependent helicase/nuclease subunit A n=7 Ta... 80 6e-13 UniRef50_C8WEW4 UvrD/REP helicase n=3 Tax=Zymomonas mobilis RepI... 80 6e-13 UniRef50_A0JYL5 UvrD/REP helicase n=4 Tax=Actinomycetales RepID=... 80 6e-13 UniRef50_B3DQ57 Superfamily I DNA and RNA helicase n=3 Tax=Bifid... 80 7e-13 UniRef50_A4F8N5 Probable ATP-dependent DNA helicase n=1 Tax=Sacc... 80 7e-13 UniRef50_C6W379 UvrD/REP helicase n=1 Tax=Dyadobacter fermentans... 79 7e-13 UniRef50_A8Q3F1 Putative uncharacterized protein n=1 Tax=Malasse... 79 7e-13 UniRef50_Q5HY14 DNA helicase II UvrD n=2 Tax=Gluconobacter oxyda... 79 7e-13 UniRef50_A3DH19 ATP-dependent helicase/nuclease subunit A n=7 Ta... 79 8e-13 UniRef50_A5DGH7 Putative uncharacterized protein n=2 Tax=Pichia ... 79 8e-13 UniRef50_C5CB78 DNA/RNA helicase, superfamily I n=1 Tax=Micrococ... 79 8e-13 UniRef50_D2VUP5 Predicted protein n=1 Tax=Naegleria gruberi RepI... 79 9e-13 UniRef50_Q1MQG7 Uncharacterized conserved protein n=1 Tax=Lawson... 79 1e-12 UniRef50_Q6AJ72 Probable ATP-dependent DNA helicase, UvrD/REP fa... 79 1e-12 UniRef50_B6WV09 Putative uncharacterized protein n=1 Tax=Desulfo... 79 1e-12 UniRef50_C6WMF4 UvrD/REP helicase n=3 Tax=Actinomycetales RepID=... 79 1e-12 UniRef50_C8Q3Z5 UvrD/REP helicase n=2 Tax=Proteobacteria RepID=C... 79 1e-12 UniRef50_A0LVT8 UvrD/REP helicase n=1 Tax=Acidothermus celluloly... 79 1e-12 UniRef50_B0MQS7 Putative uncharacterized protein n=1 Tax=Eubacte... 79 1e-12 UniRef50_A3DE23 UvrD/REP helicase n=3 Tax=Clostridium thermocell... 79 1e-12 UniRef50_D2RA55 UvrD/REP helicase n=1 Tax=Gardnerella vaginalis ... 79 1e-12 UniRef50_Q97JY0 ATP-dependent DNA helicase, uvrD-like n=1 Tax=Cl... 79 1e-12 UniRef50_C5EJB8 Putative uncharacterized protein n=1 Tax=Clostri... 79 1e-12 UniRef50_B2A610 ATP-dependent helicase/nuclease subunit A n=1 Ta... 79 1e-12 UniRef50_B9CK49 Putative uncharacterized protein n=1 Tax=Atopobi... 79 2e-12 UniRef50_Q896L9 DNA helicase II n=2 Tax=cellular organisms RepID... 79 2e-12 UniRef50_D2LQX0 LexA repressor n=1 Tax=Bacillus cellulosilyticus... 78 2e-12 UniRef50_C8WYD2 UvrD/REP helicase n=2 Tax=Alicyclobacillus acido... 78 2e-12 UniRef50_A1W088 ATP-dependent DNA helicase, UvrD/REP family n=30... 78 2e-12 UniRef50_C8S459 UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 Re... 78 2e-12 UniRef50_A3TGM1 Putative DNA helicase n=1 Tax=Janibacter sp. HTC... 78 2e-12 UniRef50_D2MMT0 Putative uncharacterized protein n=1 Tax=Bulleid... 78 2e-12 UniRef50_C4Z484 DNA helicase II / ATP-dependent DNA helicase Pcr... 78 2e-12 UniRef50_B9R0C3 Putative uncharacterized protein n=1 Tax=Labrenz... 78 2e-12 UniRef50_C3JKU1 UvrD/REP helicase domain protein n=6 Tax=Coryneb... 78 2e-12 UniRef50_C2HH84 ATP-dependent exonuclease n=2 Tax=Finegoldia mag... 78 2e-12 UniRef50_C7MBM6 DNA/RNA helicase, superfamily I n=1 Tax=Brachyba... 78 2e-12 UniRef50_A2F0U7 UvrD/REP helicase family protein n=1 Tax=Trichom... 78 2e-12 UniRef50_C1XIE9 DNA/RNA helicase, superfamily I n=1 Tax=Meiother... 78 2e-12 UniRef50_D1BPK1 UvrD/REP helicase n=3 Tax=Veillonella RepID=D1BP... 78 2e-12 UniRef50_C6A914 DNA helicase II n=11 Tax=Bifidobacterium RepID=C... 78 2e-12 UniRef50_UPI0001B56A46 ATP-dependent DNA helicase n=1 Tax=Strept... 78 3e-12 UniRef50_B8J1U7 UvrD/REP helicase n=1 Tax=Desulfovibrio desulfur... 78 3e-12 UniRef50_C5CYJ2 Exonuclease-like protein n=2 Tax=Comamonadaceae ... 77 3e-12 UniRef50_B2ULJ6 ATP-dependent nuclease subunit B-like protein n=... 77 3e-12 UniRef50_A3IS96 Helicase/exonuclease n=1 Tax=Cyanothece sp. CCY0... 77 3e-12 UniRef50_Q3SMQ4 Putative uncharacterized protein n=1 Tax=Thiobac... 77 3e-12 UniRef50_C2BJG0 Helicase n=5 Tax=Corynebacterium RepID=C2BJG0_9CORY 77 3e-12 UniRef50_A0LFH7 ATP-dependent nuclease subunit B-like n=1 Tax=Sy... 77 3e-12 UniRef50_UPI0001AEED98 ATP-dependent DNA helicase n=3 Tax=Strept... 77 3e-12 UniRef50_C1RP66 DNA/RNA helicase, superfamily I n=1 Tax=Cellulom... 77 4e-12 UniRef50_A3CVL1 UvrD/REP helicase n=4 Tax=Methanomicrobia RepID=... 77 4e-12 UniRef50_B5IF83 UvrD/REP helicase domain protein n=1 Tax=Aciduli... 77 4e-12 UniRef50_B8DM59 UvrD/REP helicase n=5 Tax=Bacteria RepID=B8DM59_... 77 4e-12 UniRef50_B9MLH8 LexA repressor n=1 Tax=Anaerocellum thermophilum... 77 4e-12 UniRef50_O26572 DNA helicase II n=1 Tax=Methanothermobacter ther... 77 4e-12 UniRef50_B9AD93 Putative uncharacterized protein n=2 Tax=Methano... 77 5e-12 UniRef50_A5IY88 ATP dependent helicase n=2 Tax=Mycoplasma RepID=... 77 5e-12 UniRef50_P75437 Probable DNA helicase II homolog n=3 Tax=Mycopla... 77 6e-12 UniRef50_B0DAK6 Predicted protein n=1 Tax=Laccaria bicolor S238N... 76 6e-12 UniRef50_Q311L2 Putative uncharacterized protein n=1 Tax=Desulfo... 76 6e-12 UniRef50_C4G8V9 Putative uncharacterized protein n=1 Tax=Shuttle... 76 6e-12 UniRef50_A2RH77 ATP-dependent helicase/nuclease subunit A n=4 Ta... 76 6e-12 UniRef50_Q6CK19 KLLA0F14256p n=1 Tax=Kluyveromyces lactis RepID=... 76 6e-12 UniRef50_A6SVL7 Uncharacterized conserved protein n=2 Tax=Oxalob... 76 6e-12 UniRef50_C7NJY7 DNA/RNA helicase, superfamily I n=1 Tax=Kytococc... 76 6e-12 UniRef50_B8DWI6 UvrD/REP helicase n=4 Tax=Bifidobacterium animal... 76 7e-12 UniRef50_A5N879 ATP-dependent DNA helicase n=2 Tax=Clostridium k... 76 7e-12 UniRef50_C8PTM7 ATP-dependent DNA helicase PcrA n=1 Tax=Treponem... 76 7e-12 UniRef50_D2SFF1 UvrD/REP helicase n=1 Tax=Geodermatophilus obscu... 76 7e-12 UniRef50_D1B4A6 Putative uncharacterized protein n=1 Tax=Sulfuro... 76 7e-12 UniRef50_Q2NK11 UvrD helicase n=2 Tax=Candidatus Phytoplasma ast... 76 7e-12 UniRef50_C6XGC2 DNA helicase II n=1 Tax=Candidatus Liberibacter ... 76 8e-12 UniRef50_B0RE31 Putative DNA helicase n=2 Tax=Clavibacter michig... 76 8e-12 UniRef50_C4Z0W6 Putative uncharacterized protein n=1 Tax=Eubacte... 76 8e-12 UniRef50_C7NJY3 DNA/RNA helicase, superfamily I n=1 Tax=Kytococc... 76 8e-12 UniRef50_A9BHB1 UvrD/REP helicase n=8 Tax=Thermotogaceae RepID=A... 76 8e-12 UniRef50_C6HZQ0 UvrD/REP helicase n=3 Tax=Leptospirillum RepID=C... 76 8e-12 UniRef50_Q88U41 ATP-dependent helicase/nuclease subunit A n=3 Ta... 76 8e-12 UniRef50_C2CUY3 UvrD/REP helicase n=1 Tax=Gardnerella vaginalis ... 76 8e-12 UniRef50_UPI0001C4301E hypothetical protein BpOF4_02565 n=1 Tax=... 76 8e-12 UniRef50_D1BAW5 DNA/RNA helicase, superfamily I n=1 Tax=Sanguiba... 76 9e-12 UniRef50_O26611 DNA helicase II n=1 Tax=Methanothermobacter ther... 76 9e-12 UniRef50_Q31P33 Putative uncharacterized protein n=2 Tax=Synecho... 76 9e-12 UniRef50_B5Y6N2 ATP-dependent DNA helicase PcrA n=1 Tax=Coprothe... 76 1e-11 UniRef50_A7VW13 Putative uncharacterized protein n=4 Tax=Clostri... 76 1e-11 UniRef50_D1ACL7 UvrD/REP helicase n=6 Tax=Actinomycetales RepID=... 75 1e-11 UniRef50_A1U7Y3 UvrD/REP helicase n=2 Tax=Marinobacter RepID=A1U... 75 1e-11 UniRef50_C4LK54 Putative ATP-dependent DNA helicase II n=1 Tax=C... 75 1e-11 UniRef50_D0WRX3 ATP-dependent DNA helicase II n=1 Tax=Actinomyce... 75 1e-11 UniRef50_Q04T32 ATP-dependent DNA helicase n=4 Tax=Leptospira Re... 75 1e-11 UniRef50_C6C0S1 UvrD/REP helicase n=3 Tax=Desulfovibrionales Rep... 75 1e-11 UniRef50_UPI000185BEF4 helicase, uvrd/rep family n=1 Tax=Coryneb... 75 1e-11 UniRef50_D0LHE6 UvrD/REP helicase n=1 Tax=Haliangium ochraceum D... 75 1e-11 UniRef50_C0VQH4 Helicase n=2 Tax=Corynebacterium glucuronolyticu... 75 1e-11 UniRef50_C7M0Y4 UvrD/REP helicase n=1 Tax=Acidimicrobium ferroox... 75 1e-11 UniRef50_C7GAA3 ATP-dependent nuclease subunit A n=2 Tax=Rosebur... 75 1e-11 UniRef50_A0AL18 ATP-dependent helicase/nuclease subunit A n=3 Ta... 75 1e-11 UniRef50_A7ZRD5 Helicase, UvrD family n=1 Tax=Escherichia coli E... 75 1e-11 UniRef50_A6W771 UvrD/REP helicase n=1 Tax=Kineococcus radiotoler... 75 1e-11 UniRef50_Q67RU7 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 75 1e-11 UniRef50_C0BLR1 Putative uncharacterized protein n=1 Tax=Flavoba... 75 2e-11 UniRef50_A4ALD4 ATP-dependent DNA helicase n=1 Tax=marine actino... 75 2e-11 UniRef50_Q1IKH8 DNA helicase/exodeoxyribonuclease V, subunit B n... 75 2e-11 UniRef50_B8DL19 Putative uncharacterized protein n=1 Tax=Desulfo... 75 2e-11 UniRef50_C4GBK5 Putative uncharacterized protein n=1 Tax=Shuttle... 75 2e-11 UniRef50_C8RQU9 ATP-dependent DNA helicase II n=2 Tax=Corynebact... 75 2e-11 UniRef50_Q5WF16 UvrD/REP family ATP-dependent DNA helicase n=1 T... 75 2e-11 UniRef50_B0S8V9 ATP-dependent DNA helicase n=2 Tax=Leptospira bi... 75 2e-11 UniRef50_A5WC18 UvrD/REP helicase n=2 Tax=Psychrobacter RepID=A5... 75 2e-11 UniRef50_D2EH37 Recombination helicase AddA n=1 Tax=Pediococcus ... 75 2e-11 UniRef50_C4DDU0 DNA/RNA helicase, superfamily I n=1 Tax=Stackebr... 75 2e-11 UniRef50_Q1LLG5 DNA helicase/exodeoxyribonuclease V, subunit B n... 75 2e-11 UniRef50_C7HA04 ATP-dependent exoDNAse beta subunit n=1 Tax=Faec... 75 2e-11 UniRef50_Q0G5V0 Helicase, UvrD/Rep family protein n=2 Tax=Aurant... 75 2e-11 UniRef50_C5RQN8 Recombination helicase AddA n=1 Tax=Clostridium ... 75 2e-11 UniRef50_A8RMK4 Putative uncharacterized protein n=1 Tax=Clostri... 75 2e-11 UniRef50_C4DDU1 DNA/RNA helicase, superfamily I n=1 Tax=Stackebr... 74 2e-11 UniRef50_C2FTD7 Putative uncharacterized protein n=2 Tax=Sphingo... 74 2e-11 UniRef50_A6RX56 Putative uncharacterized protein n=2 Tax=Sclerot... 74 3e-11 UniRef50_Q8RCZ0 ATP-dependent helicase/nuclease subunit A n=3 Ta... 74 3e-11 UniRef50_C6XX64 ATP-dependent nuclease subunit B n=2 Tax=Pedobac... 74 3e-11 UniRef50_C9KN36 Helicase, UvrD/REP/exonuclease family protein n=... 74 3e-11 UniRef50_C0Z545 ATP-dependent nuclease subunit A n=1 Tax=Breviba... 74 3e-11 UniRef50_A3DBW8 UvrD/REP helicase n=2 Tax=Clostridium thermocell... 74 3e-11 UniRef50_P64321 Probable DNA helicase II homolog n=61 Tax=Actino... 74 4e-11 UniRef50_C0GSZ1 Putative uncharacterized protein n=1 Tax=Desulfo... 74 4e-11 UniRef50_Q1JCJ8 ATP-dependent helicase/nuclease subunit A n=14 T... 74 4e-11 UniRef50_A1SGT8 UvrD/REP helicase n=1 Tax=Nocardioides sp. JS614... 74 4e-11 UniRef50_C0GR52 UvrD/REP helicase n=1 Tax=Desulfonatronospira th... 74 4e-11 UniRef50_A4W0M7 ATP-dependent helicase/nuclease subunit A n=61 T... 74 5e-11 UniRef50_A8L2J8 UvrD/REP helicase n=2 Tax=Actinomycetales RepID=... 74 5e-11 UniRef50_Q1QX44 UvrD/REP helicase n=1 Tax=Chromohalobacter salex... 74 5e-11 UniRef50_Q12BA3 RecB family exonuclease-like n=4 Tax=Comamonadac... 74 5e-11 UniRef50_D2SFF2 UvrD/REP helicase n=1 Tax=Geodermatophilus obscu... 74 5e-11 UniRef50_D1YBS7 HRDC domain protein n=3 Tax=Propionibacterium ac... 74 5e-11 UniRef50_C7GZ83 Putative ATP-dependent exoDNAse beta subunit n=1... 73 5e-11 UniRef50_C8X5I7 UvrD/REP helicase n=1 Tax=Desulfohalobium retbae... 73 5e-11 UniRef50_C6WM78 UvrD/REP helicase n=4 Tax=Actinomycetales RepID=... 73 5e-11 UniRef50_Q2J6E2 UvrD/REP helicase n=1 Tax=Frankia sp. CcI3 RepID... 73 5e-11 UniRef50_D1U5K5 UvrD/REP helicase n=1 Tax=Desulfovibrio aespoeen... 73 5e-11 UniRef50_UPI0001BCEB30 UvrD/REP helicase n=1 Tax=Campylobacter f... 73 6e-11 UniRef50_C4XND8 UvrD/REP helicase family protein n=1 Tax=Desulfo... 73 6e-11 UniRef50_B8DQ46 UvrD/REP helicase n=13 Tax=Desulfovibrionales Re... 73 6e-11 UniRef50_B2A7U7 LexA repressor n=1 Tax=Natranaerobius thermophil... 73 7e-11 UniRef50_C5VEC6 ATP-dependent DNA helicase n=2 Tax=Corynebacteri... 73 7e-11 UniRef50_A6LY54 UvrD/REP helicase n=1 Tax=Clostridium beijerinck... 73 7e-11 UniRef50_A6LT39 UvrD/REP helicase n=18 Tax=Clostridium RepID=A6L... 73 7e-11 UniRef50_A4WWS4 RecB family exonuclease-like protein n=41 Tax=Pr... 73 7e-11 UniRef50_C8P261 Putative uncharacterized protein n=1 Tax=Erysipe... 73 7e-11 UniRef50_A7B8W1 Putative uncharacterized protein n=1 Tax=Actinom... 73 8e-11 UniRef50_B2GEY4 ATP-dependent helicase/nuclease subunit A n=3 Ta... 73 8e-11 UniRef50_Q30VK4 ATP-dependent DNA helicase, UvrD/REP family n=1 ... 73 8e-11 UniRef50_C2HA17 UvrD Rep family helicase n=12 Tax=Enterococcus f... 73 8e-11 UniRef50_UPI0001C41A7D ATP-dependent DNA helicase UvrD/REP famil... 73 8e-11 UniRef50_C6MIZ6 TonB box domain protein n=1 Tax=Nitrosomonas sp.... 73 8e-11 UniRef50_Q0SVV0 Helicase/exonuclease n=12 Tax=Clostridium RepID=... 72 9e-11 UniRef50_A8L2I8 UvrD/REP helicase n=6 Tax=Actinomycetales RepID=... 72 1e-10 UniRef50_B6G1B8 Putative uncharacterized protein n=1 Tax=Clostri... 72 1e-10 UniRef50_B0TDI0 ATP-dependent helicase/nuclease subunit A n=1 Ta... 72 1e-10 UniRef50_Q2SYL0 Superfamily I DNA and RNA helicases n=2 Tax=Burk... 72 1e-10 UniRef50_Q1W555 UvrD/REP family helicase n=1 Tax=Pseudomonas aer... 72 1e-10 UniRef50_D2QY09 UvrD/REP helicase n=1 Tax=Pirellula staleyi DSM ... 72 1e-10 UniRef50_A6DAL9 Putative uncharacterized protein n=1 Tax=Caminib... 72 1e-10 UniRef50_Q65LJ9 ATP-dependent helicase/nuclease subunit A n=3 Ta... 72 1e-10 UniRef50_Q28JY0 Putative uncharacterized protein n=1 Tax=Jannasc... 72 1e-10 UniRef50_C6PW58 ATP-dependent nuclease subunit B-like protein n=... 72 1e-10 UniRef50_Q897M0 ATP-dependent nuclease subunit A n=1 Tax=Clostri... 72 1e-10 UniRef50_C5BPK5 Putative uncharacterized protein n=1 Tax=Teredin... 72 1e-10 UniRef50_B8I7B7 UvrD/REP helicase n=2 Tax=Clostridium RepID=B8I7... 72 1e-10 UniRef50_C0B669 Putative uncharacterized protein n=1 Tax=Coproco... 72 1e-10 UniRef50_Q2J6F0 UvrD/REP helicase n=37 Tax=root RepID=Q2J6F0_FRASC 72 1e-10 UniRef50_B5CQ86 Putative uncharacterized protein n=1 Tax=Ruminoc... 72 2e-10 UniRef50_C7R1R1 UvrD/REP helicase n=2 Tax=Micrococcineae RepID=C... 72 2e-10 UniRef50_Q1YTF1 Putative uncharacterized protein n=1 Tax=gamma p... 72 2e-10 UniRef50_C4G2E3 Putative uncharacterized protein n=1 Tax=Abiotro... 72 2e-10 UniRef50_B7GQ33 UvrD/REP helicase n=2 Tax=Bifidobacterium longum... 72 2e-10 UniRef50_Q04GY7 ATP-dependent helicase/nuclease subunit A n=1 Ta... 71 2e-10 UniRef50_Q2LTE2 UvrD/rep helicase n=1 Tax=Syntrophus aciditrophi... 71 2e-10 UniRef50_B5YI00 ATP-dependent DNA helicase PcrA n=1 Tax=Thermode... 71 2e-10 UniRef50_A7BEI5 Putative uncharacterized protein n=1 Tax=Actinom... 71 2e-10 UniRef50_C7XXL2 Recombination helicase AddA n=1 Tax=Lactobacillu... 71 2e-10 UniRef50_D2R2V0 ATP-dependent nuclease subunit B-like protein n=... 71 2e-10 UniRef50_D2L2C1 UvrD/REP helicase n=1 Tax=Desulfovibrio sp. FW10... 71 2e-10 UniRef50_A6GBC2 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica ... 71 2e-10 UniRef50_C4Z991 DNA helicase II n=1 Tax=Eubacterium rectale ATCC... 71 2e-10 UniRef50_A8ZTY6 UvrD/REP helicase n=1 Tax=Desulfococcus oleovora... 71 2e-10 UniRef50_Q6KHF5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mo... 71 2e-10 UniRef50_C5VEC7 Helicase, uvrd/rep family n=2 Tax=Corynebacteriu... 71 2e-10 UniRef50_Q2YB42 DNA helicase/exodeoxyribonuclease V, subunit B n... 71 2e-10 UniRef50_C1PCZ8 UvrD/REP helicase n=1 Tax=Bacillus coagulans 36D... 71 3e-10 UniRef50_A4IKW7 ATP-dependent helicase/nuclease subunit A n=94 T... 71 3e-10 UniRef50_Q7US05 Putative uncharacterized protein n=1 Tax=Rhodopi... 71 3e-10 UniRef50_B7GM51 ATP-dependent helicase/nuclease subunit A n=1 Ta... 71 3e-10 UniRef50_A9KTE6 ATP-dependent helicase/nuclease subunit A n=1 Ta... 71 3e-10 UniRef50_UPI0001C4301D ATP-dependent nuclease subunit A n=1 Tax=... 71 3e-10 UniRef50_Q2NB36 Helicase n=4 Tax=Sphingomonadales RepID=Q2NB36_E... 71 3e-10 UniRef50_D2B0K9 Superfamily I DNA and RNA helicase-like protein ... 71 3e-10 UniRef50_D2RKU1 Exodeoxyribonuclease V n=1 Tax=Acidaminococcus f... 71 3e-10 UniRef50_C4ZAR0 ATP-dependent DNA helicase n=4 Tax=Clostridiales... 71 3e-10 UniRef50_C2BJF9 Superfamily I DNA and RNA helicase n=4 Tax=Coryn... 71 3e-10 UniRef50_C7R1Q8 UvrD/REP helicase n=1 Tax=Jonesia denitrificans ... 71 3e-10 UniRef50_B0RA36 Putative helicase n=1 Tax=Halobacterium salinaru... 70 3e-10 UniRef50_A6Q6N6 Putative uncharacterized protein n=1 Tax=Sulfuro... 70 3e-10 UniRef50_B0PH90 Putative uncharacterized protein n=1 Tax=Anaerot... 70 3e-10 UniRef50_Q5YR01 Putative helicase n=4 Tax=Corynebacterineae RepI... 70 3e-10 UniRef50_UPI0000F51769 UvrD/REP helicase n=1 Tax=Ferroplasma aci... 70 4e-10 UniRef50_D0YTA7 Putative UvrD/REP helicase family protein n=2 Ta... 70 4e-10 UniRef50_A6W770 UvrD/REP helicase n=1 Tax=Kineococcus radiotoler... 70 4e-10 UniRef50_Q2J6J7 UvrD/REP helicase n=2 Tax=Bacteria RepID=Q2J6J7_... 70 4e-10 UniRef50_B9CZT8 Putative uncharacterized protein n=2 Tax=Campylo... 70 4e-10 UniRef50_C6Q0I3 UvrD/REP helicase n=1 Tax=Clostridium carboxidiv... 70 4e-10 UniRef50_Q5CVQ2 UvrD like super family I helicase involved in nu... 70 4e-10 UniRef50_A1W8E2 RecB family exonuclease-like protein n=4 Tax=Com... 70 4e-10 UniRef50_A5D1P3 ATP-dependent helicase/nuclease subunit A n=2 Ta... 70 4e-10 UniRef50_C0CXS0 Putative uncharacterized protein (Fragment) n=1 ... 70 5e-10 UniRef50_D1V906 UvrD/REP helicase n=1 Tax=Frankia sp. EuI1c RepI... 70 5e-10 UniRef50_B8HW82 UvrD/REP helicase n=1 Tax=Cyanothece sp. PCC 742... 70 5e-10 UniRef50_C1A6C2 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas ... 70 5e-10 UniRef50_A1VQ25 UvrD/REP helicase n=1 Tax=Polaromonas naphthalen... 70 5e-10 UniRef50_D1VUK5 UvrD/REP helicase n=1 Tax=Peptoniphilus lacrimal... 70 6e-10 UniRef50_B5GJN9 ATP-dependent DNA helicase n=2 Tax=Streptomyces ... 70 6e-10 UniRef50_C7MVN2 DNA/RNA helicase, superfamily I n=5 Tax=Actinomy... 70 6e-10 UniRef50_B5YD55 ATP-dependent DNA helicase n=2 Tax=Dictyoglomus ... 70 6e-10 UniRef50_B0MXL7 Putative uncharacterized protein n=1 Tax=Alistip... 70 6e-10 UniRef50_Q897P0 DNA helicase II n=1 Tax=Clostridium tetani RepID... 70 6e-10 UniRef50_C8PM70 ATP-dependent DNA helicase, UvrD/Rep family n=1 ... 70 6e-10 UniRef50_C6P6T0 UvrD/REP helicase n=1 Tax=Sideroxydans lithotrop... 70 6e-10 UniRef50_Q027B7 DNA helicase/exodeoxyribonuclease V, subunit A n... 70 6e-10 UniRef50_C0GDI3 Recombination helicase AddA n=1 Tax=Dethiobacter... 70 6e-10 UniRef50_C6J3M4 UvrD/REP helicase n=2 Tax=Paenibacillus sp. oral... 70 6e-10 UniRef50_C5B538 Putative DNA helicase II n=1 Tax=Methylobacteriu... 70 6e-10 UniRef50_UPI0001850E5A UvrD/REP helicase n=1 Tax=Bacillus coahui... 70 7e-10 UniRef50_Q71X99 ATP-dependent helicase/nuclease subunit A n=17 T... 70 7e-10 UniRef50_D2BGG8 UvrD/REP helicase n=2 Tax=Bacteria RepID=D2BGG8_... 69 8e-10 UniRef50_B3R0N7 ATP-dependent DNA helicase n=1 Tax=Candidatus Ph... 69 8e-10 UniRef50_A3QCD6 UvrD/REP helicase n=7 Tax=Gammaproteobacteria Re... 69 9e-10 UniRef50_C7MLK5 Putative uncharacterized protein n=1 Tax=Cryptob... 69 9e-10 UniRef50_C0FS43 Putative uncharacterized protein n=1 Tax=Rosebur... 69 9e-10 UniRef50_D2QPX2 Putative uncharacterized protein n=1 Tax=Spiroso... 69 1e-09 UniRef50_C4LER9 UvrD/REP helicase n=1 Tax=Tolumonas auensis DSM ... 69 1e-09 UniRef50_C8NWA9 ATP-dependent DNA helicase n=1 Tax=Corynebacteri... 69 1e-09 UniRef50_B9KFA4 Putative uncharacterized protein n=1 Tax=Campylo... 69 1e-09 UniRef50_UPI0001B43F60 UvrD/REP helicase n=1 Tax=Listeria monocy... 69 1e-09 UniRef50_Q043G6 ATP-dependent helicase/nuclease subunit A n=25 T... 69 1e-09 UniRef50_C2UN36 ATP-dependent DNA helicase, UvrD/REP n=3 Tax=Bac... 69 1e-09 UniRef50_Q13F63 Putative uncharacterized protein n=2 Tax=Bradyrh... 69 1e-09 UniRef50_B4WUE6 UvrD/REP helicase domain protein n=1 Tax=Synecho... 69 1e-09 UniRef50_B7RVB6 Putative uncharacterized protein n=1 Tax=marine ... 69 1e-09 UniRef50_D1AA51 UvrD/REP helicase n=5 Tax=Actinomycetales RepID=... 69 1e-09 UniRef50_B8IZF9 UvrD/REP helicase n=1 Tax=Desulfovibrio desulfur... 69 1e-09 UniRef50_B2IL96 UvrD/REP helicase n=1 Tax=Beijerinckia indica su... 69 1e-09 UniRef50_A8SI11 Putative uncharacterized protein n=1 Tax=Faecali... 69 1e-09 UniRef50_Q1NRJ1 UvrD/REP helicase n=3 Tax=Deltaproteobacteria Re... 69 1e-09 UniRef50_C5DEJ8 KLTH0C09856p n=1 Tax=Lachancea thermotolerans CB... 69 1e-09 UniRef50_C6CTT6 Recombination helicase AddA n=2 Tax=Firmicutes R... 69 1e-09 UniRef50_A9VDB1 Predicted protein n=1 Tax=Monosiga brevicollis R... 69 1e-09 UniRef50_Q1GX41 UvrD/REP helicase n=1 Tax=Sphingopyxis alaskensi... 69 1e-09 UniRef50_Q1Q4K9 Similar to ATP-dependent DNA helicase subunit Ad... 68 2e-09 UniRef50_A1VVB9 UvrD/REP helicase n=1 Tax=Polaromonas naphthalen... 68 2e-09 UniRef50_B5RSV7 DEHA2A13530p n=2 Tax=Debaryomyces hansenii RepID... 68 2e-09 UniRef50_A3GIE1 ATP-dependent DNA helicase HMI1, mitochondrial n... 68 2e-09 UniRef50_C6IZE1 Recombination helicase AddA n=1 Tax=Paenibacillu... 68 2e-09 UniRef50_Q21J65 DNA helicase/exodeoxyribonuclease V, subunit B n... 68 2e-09 UniRef50_B3WEJ1 ATP-dependent helicase/nuclease subunit A n=8 Ta... 68 2e-09 UniRef50_C0CWX3 Putative uncharacterized protein n=3 Tax=Clostri... 68 2e-09 UniRef50_Q7MSD4 Putative uncharacterized protein n=1 Tax=Wolinel... 68 2e-09 UniRef50_A4CIG7 Putative uncharacterized protein n=1 Tax=Robigin... 68 2e-09 UniRef50_A9WPI7 ATP-dependent DNA helicase n=1 Tax=Renibacterium... 68 2e-09 UniRef50_C6BZD0 Putative uncharacterized protein n=1 Tax=Desulfo... 68 2e-09 UniRef50_Q2W7F4 Superfamily I DNA and RNA helicase n=2 Tax=Magne... 68 2e-09 UniRef50_B0S125 DNA helicase II n=2 Tax=Finegoldia magna RepID=B... 68 2e-09 UniRef50_A8PMU2 Putative uncharacterized protein n=1 Tax=Rickett... 68 2e-09 UniRef50_Q0TV46 ATP-dependent helicase/nuclease subunit A n=12 T... 68 2e-09 UniRef50_D1V977 UvrD/REP helicase n=1 Tax=Frankia sp. EuI1c RepI... 68 2e-09 UniRef50_C2KQX4 Possible UvrD/REP helicase n=3 Tax=Mobiluncus Re... 68 2e-09 UniRef50_C0W129 DNA helicase n=1 Tax=Actinomyces coleocanis DSM ... 68 2e-09 UniRef50_C6WJG5 UvrD/REP helicase n=1 Tax=Actinosynnema mirum DS... 68 2e-09 UniRef50_B3L6C4 Helicase, belonging to UvrD family, putative n=1... 68 3e-09 UniRef50_Q5E4C9 DNA helicase IV n=3 Tax=Aliivibrio RepID=Q5E4C9_... 68 3e-09 UniRef50_B2KE90 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum... 67 3e-09 UniRef50_A0M6R8 Putative uncharacterized protein n=3 Tax=Flavoba... 67 3e-09 UniRef50_D0WNM4 Helicase, UvrD/Rep family n=1 Tax=Actinomyces sp... 67 3e-09 UniRef50_UPI0001850EC4 UvrD/REP helicase n=1 Tax=Bacillus coahui... 67 3e-09 UniRef50_A4IZ03 UvrD/REP helicase n=16 Tax=Francisella RepID=A4I... 67 3e-09 UniRef50_A6WGC8 UvrD/REP helicase n=1 Tax=Kineococcus radiotoler... 67 3e-09 UniRef50_Q0BZ49 UvrD/REP helicase domain protein n=2 Tax=Rhodoba... 67 3e-09 UniRef50_C6PW57 UvrD/REP helicase n=1 Tax=Clostridium carboxidiv... 67 3e-09 UniRef50_C6B123 Double-strand break repair protein AddB n=19 Tax... 67 3e-09 UniRef50_Q31P32 Putative uncharacterized protein n=2 Tax=Synecho... 67 4e-09 UniRef50_C7RGF9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7R... 67 4e-09 UniRef50_A6P133 Putative uncharacterized protein n=1 Tax=Bactero... 67 4e-09 UniRef50_C6JEU5 Putative uncharacterized protein n=1 Tax=Ruminoc... 67 4e-09 UniRef50_A6L5X5 Putative uncharacterized protein n=19 Tax=Bacter... 67 4e-09 UniRef50_Q1Q555 Similar to DNA helicase n=1 Tax=Candidatus Kuene... 67 4e-09 UniRef50_B8IZF8 Putative uncharacterized protein n=1 Tax=Desulfo... 67 5e-09 UniRef50_D0LEA1 UvrD/REP helicase n=1 Tax=Gordonia bronchialis D... 67 5e-09 UniRef50_B8HWJ9 UvrD/REP helicase n=1 Tax=Cyanothece sp. PCC 742... 67 5e-09 UniRef50_A5GF30 UvrD/REP helicase n=1 Tax=Geobacter uraniireduce... 67 5e-09 UniRef50_A6BJ96 Putative uncharacterized protein n=5 Tax=Clostri... 67 5e-09 UniRef50_A2TR02 Putative uncharacterized protein n=1 Tax=Dokdoni... 67 5e-09 UniRef50_Q2IKV6 ATP-dependent nuclease subunit B-like n=3 Tax=An... 67 5e-09 UniRef50_C7MBM5 DNA/RNA helicase, superfamily I n=1 Tax=Brachyba... 67 5e-09 UniRef50_Q12XW1 DNA helicase, ATP dependent n=1 Tax=Methanococco... 67 5e-09 UniRef50_B3ERL2 Putative uncharacterized protein n=1 Tax=Candida... 67 5e-09 UniRef50_A5FWN2 UvrD/REP helicase n=1 Tax=Acidiphilium cryptum J... 67 5e-09 UniRef50_C6W0I6 Putative uncharacterized protein n=1 Tax=Dyadoba... 67 5e-09 UniRef50_Q24FH4 UvrD/REP helicase family protein n=1 Tax=Tetrahy... 67 5e-09 UniRef50_C7M8K3 Putative uncharacterized protein n=2 Tax=Capnocy... 67 6e-09 UniRef50_B5EW84 ATP-dependent DNA helicase Rep n=1 Tax=Vibrio fi... 67 6e-09 UniRef50_B1GZD6 Putative uncharacterized protein n=1 Tax=uncultu... 67 6e-09 UniRef50_Q04AN7 ATP-dependent helicase/nuclease subunit A n=3 Ta... 67 6e-09 UniRef50_C2YFF5 ATP-dependent DNA helicase rep n=2 Tax=Bacillus ... 67 6e-09 UniRef50_C1RM19 DNA/RNA helicase, superfamily I n=1 Tax=Cellulom... 67 6e-09 UniRef50_Q1WRS0 ATP-dependent helicase/nuclease subunit A n=3 Ta... 67 6e-09 UniRef50_B5RLS9 DNA helicase n=24 Tax=Borrelia RepID=B5RLS9_BORDL 66 8e-09 UniRef50_Q23JB9 UvrD/REP helicase family protein n=2 Tax=Tetrahy... 66 8e-09 UniRef50_A3VPE1 Putative uncharacterized protein n=1 Tax=Parvula... 66 8e-09 >UniRef50_P07648 Exodeoxyribonuclease V gamma chain n=185 Tax=cellular organisms RepID=EX5C_ECOLI Length = 1122 Score = 1251 bits (3236), Expect = 0.0, Method: Composition-based stats. Identities = 1122/1122 (100%), Positives = 1122/1122 (100%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI Sbjct: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD Sbjct: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG Sbjct: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF Sbjct: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL Sbjct: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR Sbjct: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP Sbjct: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA Sbjct: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA Sbjct: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL Sbjct: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN Sbjct: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL Sbjct: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL Sbjct: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF Sbjct: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR 900 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR Sbjct: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR 900 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ 960 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ Sbjct: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ 960 Query: 961 PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL 1020 PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL Sbjct: 961 PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL 1020 Query: 1021 SQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMM 1080 SQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMM Sbjct: 1021 SQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMM 1080 Query: 1081 VRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS 1122 VRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS Sbjct: 1081 VRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS 1122 >UniRef50_C4K849 Exonuclease V, gamma chain with recB and recD: 5' and 3' nuclease, ATPase, recombinase, helicase n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K849_HAMD5 Length = 1123 Score = 1093 bits (2827), Expect = 0.0, Method: Composition-based stats. Identities = 613/1130 (54%), Positives = 795/1130 (70%), Gaps = 29/1130 (2%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M YHSN+LD+L+ L ++E+E L +PF+ E+ILVQS GMAQWLQ+ L+Q GI+ANI Sbjct: 1 MFITYHSNQLDLLKTLTSTLIEKEPLKNPFQKEIILVQSPGMAQWLQIQLAQSLGISANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FPLPA+FIWDMF +VL IPKES FNK +M+WKLM LLP LL+ F ++HYL DD D Sbjct: 61 QFPLPATFIWDMFTKVLKNIPKESPFNKDAMTWKLMCLLPDLLQNPIFASIKHYLQDDED 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 K+K+ QL+ + ADLFDQYLVYR +WL WE G + L + Q WQA LW +L+ Y+ QL Sbjct: 121 KQKIHQLAIRIADLFDQYLVYRSEWLDGWENGKKFDDLNKNQDWQAALWVSLIRYSRQLE 180 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 QP WHRA LYQRFI+ L LP RVFI GIS LPP+YL+ L+AL +H++IH +F Sbjct: 181 QPEWHRARLYQRFIQALNKNDVDSDLLPKRVFIFGISTLPPIYLKGLEALSRHMDIHFMF 240 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NPCRY+WGDI++ LAKL + + E + NPLL Sbjct: 241 NNPCRYFWGDIQNYDILAKLNIKNTSSDLRNIEE-------------------EQINPLL 281 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 ASWG+LGRD++YLLS +E QE+ AFVD+ PDNLLH +Q D+LE +N+A + E S Sbjct: 282 ASWGRLGRDHLYLLSQIEGLQEIHAFVDIEPDNLLHALQHDMLEFKNQATRHFS-ESNSH 340 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + KR LD D SI H CHS QREVE+L D+LL + EDP LTPRD+IVMVADID+Y+P Sbjct: 341 HNKKRLLDINDRSIGVHSCHSQQREVEILQDQLLNLFSEDPALTPRDVIVMVADIDNYAP 400 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +IQAVF +A +RYLP+AISDR+ Q HPVL+ FI LL LP SRF SE VL LL++ L+ Sbjct: 401 YIQAVFSNASLERYLPFAISDRKMTQVHPVLQTFIKLLDLPQSRFSSEQVLGLLEISALS 460 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 +F+I E+ L LR+WV SGIRWG+D++NV++L LP TGQHTW+FGL RM LGYAM+S Sbjct: 461 QKFEIQEKELSLLREWVEGSGIRWGLDNENVQDLSLPITGQHTWQFGLKRMFLGYAMDSQ 520 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 G+W+ VLPYDES+GL AEL+G LA LLM L+IWR+ L R L EWLP+CRD+ AFF Sbjct: 521 AGDWEGVLPYDESTGLAAELIGKLARLLMMLSIWRKKLKTSRLLSEWLPLCRDLFYAFFE 580 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 +AETE+ LI+QQWQ II GL AQY + VP+SL+R +L R + +RISQRFLAGP+N Sbjct: 581 SNAETESIFILIDQQWQNIIQYGLSAQYANTVPVSLIRHDLVTRFENQRISQRFLAGPIN 640 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 CTLMPMRSIPFKVVCLLGMN+G+YPR L PLGFDLM++K ++GDRSRRDDDRYLFLEAL Sbjct: 641 FCTLMPMRSIPFKVVCLLGMNEGIYPRILPPLGFDLMAKKRQKGDRSRRDDDRYLFLEAL 700 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 +SAQQ LYISYIGRSIQDNS+R+PSVLV EL++YIG S+ LPGDE N DES ARV HL Sbjct: 701 LSAQQYLYISYIGRSIQDNSQRYPSVLVSELLEYIGNSYVLPGDENRNSDESMARVIQHL 760 Query: 781 TCLHTRMPFDPQNYQPG-ERQSYAREWLPAA----SQAGKAHSEFVQPLPFTLPETVPLE 835 HTRMPF +N+ G E+QSYA EWL AA + + +F++PL + L+ Sbjct: 761 LFCHTRMPFSAKNFIKGTEQQSYAIEWLEAAKKHTQEQKQPQDDFIKPLVSEPFSEITLD 820 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE 895 L F+ HP++AFFQ+RL V FR E E+ + EPFIL L+RYQ N +LLNAL+EQ + + Sbjct: 821 ELINFYRHPIKAFFQLRLGVQFRVEQKELSNEEPFILAPLARYQFNTELLNALIEQKNVD 880 Query: 896 RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ--SMEIDLACNGVQIT 953 +L+ R +A+G LP+G FGEI+W+ Q EM +A ++ + +E++ ++ Sbjct: 881 QLYARMQASGRLPFGHFGEIYWQQQKNEMGLIAKKIQTETGHTEFCRLEVNTTLGERTLS 940 Query: 954 GWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAA 1013 GW+ Q DGL+RWRPS L++ G+ LW+EHL YC SGG GESR++ +K+ WRF L+ Sbjct: 941 GWIAHAQTDGLIRWRPSTLTIVDGLLLWIEHLAYCLSGGKGESRIYGKKESVWRFSALSQ 1000 Query: 1014 EQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQ 1073 +A +LS IEGY++GM PLL+L SG AWL CYD +N +L D+ T KA+ L Sbjct: 1001 SEAEQHLSLFIEGYQKGMIQPLLLLNHSGWAWLTKCYDLKNRHILWDEKTQAKAKDHLLT 1060 Query: 1074 AYEGNMMV--RGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 ++GN RGEGDD + QRL+R + ++ I+++++ +LLP+ N Sbjct: 1061 VFQGNPKTGVRGEGDDPYIQRLFRSINDTHVDRILQEAKNYLLPIAHHNI 1110 >UniRef50_A6FE97 Putative exodeoxyribonuclease V n=1 Tax=Moritella sp. PE36 RepID=A6FE97_9GAMM Length = 1130 Score = 1082 bits (2797), Expect = 0.0, Method: Composition-based stats. Identities = 496/1138 (43%), Positives = 681/1138 (59%), Gaps = 28/1138 (2%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +YHSN+LD+L+ LM + ++ L DPF E +LVQS GMAQW++M L++ GI+ANI Sbjct: 1 MFNLYHSNQLDILKELMAHFIAKDPLADPFVEEQVLVQSPGMAQWVKMELAKSMGISANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FPLPASFIW MF +VLP+IP +SAFNK++MSWKLM +LP+LL +F L+HYL DD D Sbjct: 61 TFPLPASFIWKMFQKVLPDIPDKSAFNKEAMSWKLMLILPELLVLAEFESLKHYLADDQD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 +LFQL K +D FDQYLVYRP+W+A WE G + + WQ LW+ LV T LG Sbjct: 121 DYRLFQLCQKISDTFDQYLVYRPEWIAGWEGGDNM--HADTHPWQPLLWRELVAKTEVLG 178 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 Q +HRANLY +FI L S+T LP R+F+ G+SALPP YL ALQAL H EIH + Sbjct: 179 QSHYHRANLYDQFIARLNSSTFDAKLLPDRIFVFGVSALPPRYLDALQALAMHTEIHFML 238 Query: 241 TNPCRYYWGDIKDPAYLAKLLT--RQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 +NPCR YWGD+ DP +L K T + + D + LF+ D VGNP Sbjct: 239 SNPCRLYWGDLIDPKWLLKQRTMVNHHNVTLGMSDKVSANDEQTVRALFDEDDAFKVGNP 298 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 LLAS GKLGRD + LL+ QELD FV+ T D LL +IQ DIL+L +R++A N+ + Sbjct: 299 LLASMGKLGRDNLALLTGFG-CQELDVFVEPTDDGLLASIQRDILDLADRSMAEFNVSQQ 357 Query: 359 ----SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 S K P++P DSS+ H CHSP RE+EVLH+ LL M E+P L PRD+++M+ D Sbjct: 358 DTNTRDSRYKLPINPADSSLELHSCHSPMREIEVLHNNLLTMFSENPDLNPRDVVIMMPD 417 Query: 415 IDSYSPFIQAVFGSAP--ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 ++ YSP+IQAVFG+ +RY+P++ISD A+ +P+L +F+ LL+LP SR ++L+ Sbjct: 418 VNGYSPYIQAVFGAMDRYDERYIPFSISDSGAQYDNPILLSFLQLLTLPLSRCNVSELLS 477 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 LL+VP + ARF IT + LRQW++ESGIRWG+D+D+ +LP Q+TW FGL RML Sbjct: 478 LLEVPAVLARFAITPDEFNRLRQWIDESGIRWGLDEDDATRFDLPGMKQNTWLFGLHRML 537 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 LGYA +Q +LPY E G+ AEL+G LA + L L + + +W+ + Sbjct: 538 LGYAYGG-DDIYQGILPYQEVQGIEAELLGKLAHFIEALLDSLTSLQDPKSIADWIKLGN 596 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 +++ F+ D + E ++ +I + + + A Y + +LR L L Q SQ Sbjct: 597 TLIDNFYKIDVDDEQSIKMIRDAFSHLDEQLKSASYDKHITPLVLRHYLNNALSQVGASQ 656 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 +FLAG VN CTLMPMRSIPFKV+CLLGMNDGVYPR + P+GFDLM+ K+GDRSRRDDD Sbjct: 657 KFLAGQVNFCTLMPMRSIPFKVICLLGMNDGVYPRSIPPMGFDLMANDLKQGDRSRRDDD 716 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 RYLFLEALISAQ KLYISYIG SI+D SER PSVL+ EL+ Y QS + GDE L+ DES Sbjct: 717 RYLFLEALISAQSKLYISYIGSSIRDKSERLPSVLITELLQYCQQSFCITGDEGLSPDES 776 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP--- 829 A++ HL H PFD + + P S+A+EWLPA + + +PLP + Sbjct: 777 AAQLLTHLIQHHALQPFDARYFNPQAPTSFAKEWLPALAPVVELRQFLTEPLPALISNDD 836 Query: 830 -ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 + V L L RF+ HP + FF RL+V F ++ D EPF ++ L +Y + QLL Sbjct: 837 MQEVELAELLRFYRHPTKYFFNRRLKVYFNQASLDVLDDEPFDVDNLEKYHLKAQLLETE 896 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG-QSMEIDLAC 947 + D + R A+G LP G FG+I + + + QLA ++ +E+D+ Sbjct: 897 LMGGDISLVTERLVASGSLPLGRFGKISLDKEVSTVSQLAQVLMPLLTNSNDDIEVDIPL 956 Query: 948 NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFL----RKD 1003 ++ GWL + GL+R +PS + +Q+WLEHL +C S N + + K Sbjct: 957 VSGRLFGWLKHIYNGGLVRHKPSGFNGKDYLQVWLEHLCFCISIKNPAATTLVHLTAGKP 1016 Query: 1004 GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDST 1063 R + +A L QL E Y +G PL + P++G W KT Sbjct: 1017 VVQRLRVIDQSRARELLFQLFEVYNDGCCQPLALFPKTGWGWAKTKCT-------TAALD 1069 Query: 1064 LQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 K R + + +EG GE D + QR + +L E + + S+ L P+F + + Sbjct: 1070 DYKLRAEAVLNFEGGYNRMGENADDYLQRSFPRLNDEVYKLMSASSESVLFPIFEYLE 1127 >UniRef50_D0ICS0 Exodeoxyribonuclease V gamma chain n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0ICS0_VIBHO Length = 1131 Score = 1082 bits (2797), Expect = 0.0, Method: Composition-based stats. Identities = 517/1134 (45%), Positives = 710/1134 (62%), Gaps = 25/1134 (2%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M VYHSN+LD+L++L+ I++ + LD+PF+ E+ILVQS GMAQWL++ ++++ GIAAN+ Sbjct: 1 MFTVYHSNQLDLLKSLLVAIIQSKPLDNPFQKELILVQSPGMAQWLKLEMAKEQGIAANV 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +FPLPA+FIW MF ++L ++P+ S FNK++M+WKLMT+LP+ L+ DF LR YL D D Sbjct: 61 EFPLPATFIWQMFTQILDDVPQRSFFNKEAMTWKLMTVLPEKLDEPDFDELRRYLDGDDD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 ++KL+QL+ K AD++DQYLVYRP+W+ WE V+ L E + WQA LW+AL +YT QLG Sbjct: 121 QQKLYQLAGKIADIYDQYLVYRPEWIKAWENEQPVDELAEEKRWQAVLWQALYDYTLQLG 180 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLP--SRVFICGISALPPVYLQALQALGKHIEIHL 238 Q +HRANLY+ FI+ L S P GL RVF+ GISALPP YL AL+ALG+HI++H Sbjct: 181 QSPFHRANLYEEFIDVLSSHKEKPEGLQGIDRVFVFGISALPPRYLDALKALGEHIDVHY 240 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 +FTNPCRYYWGDI+D YLAK R ++ A L D +VGN Sbjct: 241 MFTNPCRYYWGDIRDKRYLAKRAA--SMAPRISRASDTEEPAQFALPLMGEDDTAEVGNS 298 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 LLAS GKLGRD + L+S+L+ + FV+V D+LLH+IQ+DIL+L NI+E Sbjct: 299 LLASMGKLGRDNLLLISELQCHEVDQGFVEVPRDSLLHHIQADILDLVEP----ENIQET 354 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 S++K P+ D S+ VCHSP REVEVLHDRLL MLE DPTL+PRDIIVMVADI++Y Sbjct: 355 LTSESKLPVSADDRSLMVEVCHSPMREVEVLHDRLLDMLESDPTLSPRDIIVMVADINAY 414 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 SP IQAVFG+AP +R++P++ISDR A Q P+L F+ LLSLPDSR + ++L +L++P Sbjct: 415 SPAIQAVFGNAPGERFIPFSISDRTADQESPILTTFLRLLSLPDSRCSAAELLEILELPA 474 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 + +F ++ WV E+GIRWG+DD+ LP Q+TW FGL RMLLGYAM Sbjct: 475 VMRKFGFDNRQFEKVKLWVEEAGIRWGLDDNTASHFSLPHQHQNTWLFGLNRMLLGYAMP 534 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 S+ G + VL YDE GL AEL G L + + + L + E W+ + + Sbjct: 535 SSAGLYNDVLAYDEVQGLEAELAGKLGAFFRVMTATQTALLDTKNGEGWIQTLTSLFDDM 594 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 F D + E A LI Q + + A + + L ++RD L ++L ER+SQRFLAG Sbjct: 595 FALDTDEELAGQLIRTQLDNWLTQLDDAGFTQTLALPIVRDYLKEKLGGERVSQRFLAGQ 654 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 VN CTLMPMRSIPF+VVCLLGMNDG YPR +AP+GFDLM+ + + GDRSRRDDDRYLFLE Sbjct: 655 VNFCTLMPMRSIPFQVVCLLGMNDGDYPRTIAPVGFDLMAGRTRAGDRSRRDDDRYLFLE 714 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 AL SAQQ+LYISY+GRS+QDNSE+ PSVLV EL+DY Q + L GD++L ES R+ Sbjct: 715 ALQSAQQRLYISYVGRSVQDNSEKVPSVLVTELLDYCRQGYCLAGDQSLPEHESGQRLLG 774 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF-----VQPLPFTLPETVP 833 L + +PF Q + R SYA EWLPAA G A + F + P P + Sbjct: 775 TLVHHNPLVPFSKQAFSQNRR-SYAAEWLPAARGEGHAAAPFLDGRALNPAPDLDIGVIE 833 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD 893 L LQRFW PV+ FF RL+V F + + + + EPF L+ L RYQ+ LL+ ++ + D Sbjct: 834 LAELQRFWRLPVQYFFNRRLKVFFESPEGAMEEAEPFALDNLRRYQLRDALLSHVMAKGD 893 Query: 894 ----AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ-PGQSMEIDLAC- 947 + F++ +A+G LP FGE+ E++ + R+ Q++EI+L Sbjct: 894 SEASLDAFFKQQKASGALPLSHFGELALESEQAGILAQYQRLKPMIADKRQALEINLTLV 953 Query: 948 ---NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDG 1004 V++ GWL + G + +R + + W++HL CA+G ++ F+ D Sbjct: 954 TSRGTVKLQGWLDERYRAGRILYRSGKVRAQDRLSAWIDHLCQCAAGEALDT-CFIGVDE 1012 Query: 1005 EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTL 1064 + + ++AE A+ L +E Y G APL LP + A L C D +DD T+ Sbjct: 1013 DVVWSAVSAESAITALVDYVEYYLAGTEAPLAFLPNTAMAGLSACIDKD-GHWSEDDVTM 1071 Query: 1065 QKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 KAR+K A+EG MV GEG++ + R+W Q ++ + E + LLP Sbjct: 1072 DKARSKMRAAFEGGYMVSGEGENTYIARVWPQADDALLDTVFELGKAVLLPALD 1125 >UniRef50_A1SUW0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Psychromonas RepID=A1SUW0_PSYIN Length = 1149 Score = 1054 bits (2725), Expect = 0.0, Method: Composition-based stats. Identities = 465/1148 (40%), Positives = 664/1148 (57%), Gaps = 43/1148 (3%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M RVYHSN+L +L+ L+ +++ +L DPF E ILVQS GMAQWLQ+ ++Q GI+ANI Sbjct: 1 MFRVYHSNQLALLKDLLVALMQGAKLTDPFASETILVQSPGMAQWLQLEIAQSTGISANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DFPLPASFIW F VL ++P +S FNK SM+W++M LLP LE DF+ L HYL DD Sbjct: 61 DFPLPASFIWQQFKHVLKDVPDKSPFNKMSMTWQIMRLLPDCLEDPDFSALLHYLEDDLY 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETG-------------HLVEGLGEAQAWQAP 167 RK FQLS K AD+FDQYLVYRP+W+A WE + E Q WQA Sbjct: 121 LRKRFQLSQKIADIFDQYLVYRPEWIAAWENASEQEISQWHAENTESIPAWLEDQRWQAK 180 Query: 168 LWKAL---VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYL 224 LWK L + + + +HRA LY+ F++TL + T LP R+F+ GISALP YL Sbjct: 181 LWKKLTLTIAESFKAQGKAYHRAGLYKDFLDTLATKKT-LEHLPKRIFVFGISALPESYL 239 Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDREL-------PLF 277 QAL L +H ++H L TNPCRYYW DI DP LAK + R+ Sbjct: 240 QALLGLAEHCDVHFLLTNPCRYYWADIVDPKLLAKRFAQSRQKLTVSGGEIKNLPDSSWQ 299 Query: 278 RDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHN 337 +D+ + ++D + +VGNPLLAS GK+GRD+++ L LE QE+DAFVD+T D+LLH+ Sbjct: 300 KDASHLQWSQSNDPDNEVGNPLLASMGKMGRDFLFQLYSLEQ-QEVDAFVDITRDSLLHH 358 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 IQ+D+L+L++ + + L P +S+T H+CHS REVE+LHD LLAM Sbjct: 359 IQADVLDLQDSSQ-----ALSKDPSARISLAPEGNSLTLHLCHSVMREVEILHDNLLAMF 413 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 D LTP+DIIVMV DID Y+P++QAVF S +RY+P++ISD A+Q +P+L +F+ L Sbjct: 414 AADNNLTPKDIIVMVPDIDQYAPYVQAVFASVEQNRYIPFSISDVSAQQENPILISFLQL 473 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L+L +R+ ED+LALL+VP + RF++ ++ L++W+NESGIRWG+D+ + + +LP Sbjct: 474 LNLNQTRYTREDILALLEVPAILQRFNLNQDEFVLLQKWINESGIRWGLDEKSAAQWDLP 533 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 Q++W FG+ RMLLGYA+ ++ + YDE GL +L+G + L + G Sbjct: 534 RLSQNSWLFGIRRMLLGYAISD--TLFEGISAYDEIQGLQGDLLGRFIDFIDALIKLQEG 591 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 L Q +W +L F+ D + ++LI + ++ A + + L +L Sbjct: 592 LKQSYNANQWQAFVYQLLEDFYQEDDDNTMVLSLIRNEMDNLLDHTGQADFTQPISLFVL 651 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 + L Q L + SQRFLAG VN CTLMPMRSIPFKVVCLLGMNDG YPR + P+GFDLM Sbjct: 652 IEHLEQHLSDQGNSQRFLAGQVNFCTLMPMRSIPFKVVCLLGMNDGQYPRNIVPMGFDLM 711 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 + KRGDRSRR++DRYLFLEAL+SAQ+K YISYIGR I DNSE+ PSVLV EL++Y Q Sbjct: 712 AGHRKRGDRSRREEDRYLFLEALLSAQEKFYISYIGRDINDNSEKMPSVLVSELLNYCQQ 771 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA---ASQAG 814 S L ++ +E +KA ++ + F + YQ + +Y W A A AG Sbjct: 772 SFVLKDNQQDQNRVAEKALKAFISFHYPMQSFSERYYQGDVK-TYNPNWWAALKDAKNAG 830 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 + + + L +L E VPLE L++F HP + FF RL V F +D + + EPF Sbjct: 831 EKSHKRLLTLDQSLTE-VPLEQLKQFLKHPCKVFFNQRLDVYFELDDDQQENDEPFSFNH 889 Query: 875 LSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC 934 L +Y + + +E + LF RAAG LP+G F + + + M+ LAD + Sbjct: 890 LQQYVLKHEQFEYALEGKSLDNLFIEKRAAGKLPFGEFAALIFTKDLEPMENLADLTTSY 949 Query: 935 -RQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN 993 +++ ID+ ++ G L GL+R + + + LWLEHL YC + G Sbjct: 950 FIGEIETINIDIQFAEKRLFGELNDHCEKGLVRVKTGNIKGKDILTLWLEHLCYCIASGQ 1009 Query: 994 GESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQ 1053 + L + + F L A+ A + +S+L+ Y G+ PL +S AW + + + Sbjct: 1010 NLNSTLLGQKEGFYFKELPADYAYNRISELLALYEAGLQQPLPFFIQSAFAWCEQVHKLE 1069 Query: 1054 NDAMLDDD---STLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQ 1110 + + DD +T+ +A+ + N EG D + R + L +A + Sbjct: 1070 PNCFVFDDLEFATIAEAQQVASLCF-SNDRGFSEGQDPYINRCYENLED-HWDAFQPLAL 1127 Query: 1111 RFLLPLFR 1118 + +P+ Sbjct: 1128 KIFMPILS 1135 >UniRef50_Q2BKD9 Exodeoxyribonuclease V, 125 kDa subunit n=2 Tax=Neptuniibacter caesariensis RepID=Q2BKD9_9GAMM Length = 1092 Score = 1047 bits (2708), Expect = 0.0, Method: Composition-based stats. Identities = 473/1121 (42%), Positives = 662/1121 (59%), Gaps = 40/1121 (3%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +VYHSN L VL+ L+ ++ R+ + DPF E ILVQS GMAQWL++ L+ K GIAA+I Sbjct: 1 MFQVYHSNSLLVLKDLLTELIRRDPISDPFVAEQILVQSPGMAQWLKLELADKSGIAASI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DFPLPASF+W F VLP++P+ SA+NK++MSWKLM +LP +L++ F+ L+ YL DD D Sbjct: 61 DFPLPASFLWKHFSEVLPDVPERSAYNKEAMSWKLMAVLPAMLKQPVFSALQQYLADDDD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + +L+QL +K AD++DQYLVYRPDW+ WE G + WQ LW+ L YT L Sbjct: 121 RFRLYQLCNKIADIYDQYLVYRPDWIEDWEQGGDIAA--ARHPWQPVLWRELKSYTEDLQ 178 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 Q WHRAN++ F++ L++ + LP R+F+ GISALP Y+ ALQALGK I++HL+ Sbjct: 179 QSHWHRANMFSAFVDGLKNPSAA-EKLPRRLFVFGISALPQNYVHALQALGKRIDVHLMV 237 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NPCRYYWGDI D + +A+L R + GNPLL Sbjct: 238 MNPCRYYWGDILDQSQIARLNRRWFSKP------------------DLDFSDYAEGNPLL 279 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 AS GKLGRDY+Y L D + E+DA+ D +LL IQ DIL+LEN E+ Sbjct: 280 ASMGKLGRDYLYQLQD-NALDEIDAYADPERGSLLSAIQQDILDLENPTRL---PEQIDN 335 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 S K LD D SI H CHS RE+EVLHD+LL M E++P L PRD+IVM+ D+ +Y+P Sbjct: 336 SHGKHRLDREDRSIELHSCHSALREIEVLHDQLLDMFEKNPLLKPRDVIVMMPDVAAYAP 395 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +I+AVF +APA+RY+PY+ISDR RQ +P+L +F +L L SRF DVL LL+VP + Sbjct: 396 YIEAVFANAPAERYIPYSISDRSNRQENPLLLSFEKILKLNSSRFTVSDVLELLEVPAVM 455 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 R + E+ + LR WV++ IRWG+D + ELP Q++WRFG+ RML+GYA+ Sbjct: 456 RRVGLDEKSFQKLRFWVDQVNIRWGMDSEQRSIWELPLFEQNSWRFGIKRMLVGYALGEG 515 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 WQ V PY E GL +EL+G LA + L+ R Q+ W+ V +L +F Sbjct: 516 SEYWQGVAPYTEIEGLESELLGKLAGFIDLLDETRLHFTQDHEFSTWIEVINQILENYFT 575 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 D + E ++ I + Q + + A Y A+ S++ L ++Q+R SQRF+ G VN Sbjct: 576 ADEQDEISLNTIRKTLQGLQEQLKDANYSQALSPSVIAHYLIDGINQQRSSQRFMVGSVN 635 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 CTLMPMRSIPF VVCLLGMNDG YPR + P+GFDLM+ P+RGDRSRRDDDRYLF+EAL Sbjct: 636 FCTLMPMRSIPFSVVCLLGMNDGTYPRSIPPVGFDLMTDYPRRGDRSRRDDDRYLFMEAL 695 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 +SAQ+KLYISYIGRSI+DN+E+ PSVLV EL+DY Q + L GDE L+C S +++AH+ Sbjct: 696 LSAQEKLYISYIGRSIRDNNEKIPSVLVSELLDYAEQGYVLEGDEELSCSNSGEKLRAHI 755 Query: 781 TCLHTRMPFDPQNY-QPGERQSYAREWLPAASQAGKAHSEFVQP-LPFTLPETVPLETLQ 838 H + F P+ + G+ S+A EWLPAA +A F+ L + L+ L Sbjct: 756 KTQHPLVAFSPEYFKSAGDYFSFASEWLPAAQAESRAAEVFLTEDLTSEALPELELKQLI 815 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF 898 F P R+FF RL+V F + E D EPF L+ LS Y + Q+ L + ++ D ERL Sbjct: 816 SFLRDPCRSFFNNRLKVYFGNSEIEAQDEEPFSLDNLSSYLLKQRYLQSALQDRDLERLD 875 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP-GQSMEIDLACNGVQITGWLP 957 + A G LP GE+ + +LA+++ + Q +EI+L+ V++ GWL Sbjct: 876 KAILAEGRLPLARAGELNLNKLRHDSLELAEKLKPLSEGTPQRIEINLSIGEVKLQGWLD 935 Query: 958 QVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQAL 1017 PD LLR+RP+ ++ + W+EHL CAS + ++ G+ + + AE+A Sbjct: 936 SCYPDHLLRYRPAQVNARDRLSTWVEHLALCASNQACRNTVYRGLSGKVFYKAVPAEKAT 995 Query: 1018 HYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEG 1077 L+ LI Y++G +AP S + + K + + G Sbjct: 996 ELLADLIRFYQQGQTAPQAFDAGSAHKYFEQ-----------QAKDPDKVMSALENQFYG 1044 Query: 1078 NMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 + G D+ + +R + P + + ++R PL Sbjct: 1045 SAYSNGLQDNPYLRRAFSDFEPF-VTQFIPLAERIYEPLLS 1084 >UniRef50_C9PLM5 Exodeoxyribonuclease V gamma chain n=5 Tax=Gammaproteobacteria RepID=C9PLM5_VIBFU Length = 1173 Score = 1039 bits (2687), Expect = 0.0, Method: Composition-based stats. Identities = 519/1171 (44%), Positives = 717/1171 (61%), Gaps = 61/1171 (5%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M VYH+N++D L+ L+ +++ + L +PFE E ILVQS GM+QWL+M L+Q+ G+AAN+ Sbjct: 1 MFTVYHANKVDTLKILLVHLIKNDPLANPFEKEQILVQSPGMSQWLKMALAQELGVAANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DFPLPA+FIW+MF +VLP +PK SAFNK++M+WKLM LLP L+++ F LR YL DD+D Sbjct: 61 DFPLPATFIWEMFTQVLPNVPKRSAFNKEAMTWKLMELLPSQLDQDVFAPLRRYLQDDTD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + KL+QL+ K AD+FD YLVYRPDW+A WE G V + WQ LWKAL +YT G Sbjct: 121 QSKLYQLAEKIADIFDGYLVYRPDWIAHWEAGESVAEIDGEHPWQPVLWKALYDYTLAQG 180 Query: 181 QPRWHRANLYQRFIETLESAT-----TCPPGLPSRVFICGISALPPVYLQALQALGKHIE 235 Q +HRANLYQ FI+ L LP R+FI GIS+LPP Y+ AL+ALG+HI+ Sbjct: 181 QSHYHRANLYQSFIDALAHIDLTHDEALRAALPKRLFIFGISSLPPRYMDALKALGEHID 240 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRH-----------SFEDRELPLFRDSENAG 284 +HL+FTNPC++YWGDI+D YLA++ +++R+ + E+ + + Sbjct: 241 VHLMFTNPCQHYWGDIRDRKYLARVESQRRKQLVLHPNAETHTFTVEGEVSPLKGELDDY 300 Query: 285 QLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE 344 Q VGN LLAS GKLGRD +YLL+ + ++E + F+DV D+LLH +Q+DIL Sbjct: 301 AGDELHTAQAVGNSLLASMGKLGRDNLYLLAQSD-NEEHELFIDVPRDSLLHQLQADILH 359 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 LE + S +K L D S+T H CHSP REVEVLHD LLAM + DP L Sbjct: 360 LEE----HQDDTLLDSSAHKPALPHGDRSLTLHACHSPMREVEVLHDELLAMFDRDPELK 415 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 PRDIIVMVADI++YSP+IQAVFG+AP +R++PY+ISDR A Q P+L AF+ L++LP SR Sbjct: 416 PRDIIVMVADINAYSPYIQAVFGNAPGERFIPYSISDRTADQESPILNAFMQLVALPQSR 475 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 ++ ++L LL+ P + ARF + ++WV ESGIRWG++D +E ELP T Q+TW Sbjct: 476 CLASELLELLETPAMMARFALDASEFDTAKRWVEESGIRWGLNDATAQEFELPQTHQNTW 535 Query: 525 RFGLTRMLLGYAMESAQGEWQ----SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 +FG+ RMLLGYAM S+ G ++ ++ PY+E G+ AEL G LA + ++ +R+ LAQ Sbjct: 536 QFGIARMLLGYAMPSSVGLFEAGGHAMAPYNEVQGMSAELAGKLAHFIDTISDYRQRLAQ 595 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 +P+E W + +L+ F D + E A+ I A+ + A Y DA+ +++ Sbjct: 596 TQPIEAWRELLSSLLDDCFSVDLDGEMALKSIRDTLAALKEQLADAGYADAISPAIMGQY 655 Query: 641 LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 L +L R+SQRFLAG VN CTLMPMRSIPF VVCLLGMNDGVYPR + P GFDLM+ + Sbjct: 656 LHDKLSGTRVSQRFLAGQVNFCTLMPMRSIPFNVVCLLGMNDGVYPRSMPPEGFDLMNGR 715 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 + GDRSRRDDDRYLFLEA++SAQ LYISY+GRSIQDN+ER PSVLV EL++Y Q++ Sbjct: 716 TRPGDRSRRDDDRYLFLEAMLSAQHTLYISYVGRSIQDNTERVPSVLVTELLEYCQQNYC 775 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF 820 L GDEAL DES AR+ L H +PF PQ + SYA+EWLPAA + G A F Sbjct: 776 LAGDEALPSDESGARLIEQLQFTHAMVPFSPQAFLTDV-GSYAKEWLPAALRQGTASGTF 834 Query: 821 VQP-----LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 + L P + L LQRFW PV+ FF RL+V F + D EPF L GL Sbjct: 835 HRALDDYLLDAIYPLELDLVELQRFWRLPVQYFFNRRLKVVFEPPLPVMEDDEPFALGGL 894 Query: 876 SRYQINQQLLNALVEQDDAE-------RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLA 928 + YQ+ LL+ L+ A+ + ++ RA G LP GAFGE+ +ET + ++L Sbjct: 895 ASYQLRDALLDGLLNAPSAQARDEVLAQFNKQQRAQGKLPVGAFGELEFETNRVQAEELV 954 Query: 929 DRVI-ACRQPGQSMEIDLACN------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW 981 ++V C+ P ++++L V ++GWL + GL+R+R + + W Sbjct: 955 EKVQFLCQAPLDDLDVNLTLTALGQSRPVHLSGWLTRRYQSGLVRYRSGAIRSEDMLAAW 1014 Query: 982 LEHLVYCASGGNGESRLFL--RKDGEWR--FPPLAAE------QALHYLSQLIEGYREGM 1031 ++HL ASG N + + RKDG PPL A AL L++L Y +GM Sbjct: 1015 IDHLAAAASGANLITHVIGYDRKDGVVHQVLPPLNANASESAALALAQLNELARLYYQGM 1074 Query: 1032 SAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQ 1091 +APL P++ A ++ + + +K+ K + + M GEG++ + Sbjct: 1075 TAPLAYFPKTALASVEAGF-----SRGQWVDDEEKSLKKMAETFNDGFMTSGEGNNHYIA 1129 Query: 1092 RLWRQLTPETMEAIVEQSQRFL-LPLFRFNQ 1121 RLW Q T E + + L P + Sbjct: 1130 RLWPQWTDELAHQVRVLASLVLQAPRLQLRD 1160 >UniRef50_B6EGE9 Exodeoxyribonuclease V gamma chain n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EGE9_ALISL Length = 1127 Score = 1039 bits (2687), Expect = 0.0, Method: Composition-based stats. Identities = 484/1138 (42%), Positives = 688/1138 (60%), Gaps = 32/1138 (2%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M VYHSN+LDVL++L+ ++ LD+PFE E ILVQS GM+QWL++ L+++ GIAAN+ Sbjct: 1 MFTVYHSNQLDVLKSLVVELIRLNPLDNPFEQEQILVQSPGMSQWLKIELAKELGIAANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FPLPA+FIWD+F +VL ++PK SAFNK++M+WK++TLLP+LL++++F L+ YL +D Sbjct: 61 TFPLPATFIWDLFTQVLDDVPKRSAFNKEAMTWKIVTLLPELLKQDEFAPLQRYLENDDK 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + K +QL++K AD+FDQYLV+RP+W+ +WE G V L WQ LW+AL + T LG Sbjct: 121 QLKCYQLAAKIADIFDQYLVFRPEWIQKWEAGEEVIELEGEHPWQPILWQALYDQTLALG 180 Query: 181 QPRWHRANLYQRFIETLES---ATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIH 237 +HRAN+++ FIETLE+ T P G+P R+F+ GI++LPP YL AL ALG+HI++H Sbjct: 181 HSPYHRANMFEHFIETLENYLQTGTLPKGMPKRLFVVGITSLPPRYLDALAALGQHIDVH 240 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 L+FTNPC++YWGD++D YLAKL + R +L + ++ N Sbjct: 241 LMFTNPCQHYWGDLRDNKYLAKLDRQNRIAKRLSSDLSTLENDDSDLFTN------KSEN 294 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 LLASWGKLGRD LL DLE + E FV ++LLH+IQSDIL LE R+ V Sbjct: 295 SLLASWGKLGRDNFQLLLDLEPN-EYKIFVPTGREDLLHSIQSDILNLEERSRDDV---- 349 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 S++K+P+ P D SI H CHSP REVEVLHD+LL M DP L PRDIIVMVADI+ Sbjct: 350 LDNSEHKQPISPDDRSILLHSCHSPMREVEVLHDQLLDMFANDPELKPRDIIVMVADINV 409 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 YS IQAVFG+A DRY+P+AISD+ A Q +PVL AF++L++LP++R ++L+LL+VP Sbjct: 410 YSAAIQAVFGNAAFDRYIPFAISDQSAEQENPVLLAFMNLMALPENRCGLSELLSLLEVP 469 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + +RF E +++W E+GIRWG+D+ +LP Q++W FG+ RMLLGYAM Sbjct: 470 AVMSRFKFNAEQFEIVKRWAEETGIRWGLDNSTSAHFDLPEHNQNSWLFGIQRMLLGYAM 529 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 E G ++ + Y++ G+ AE+ G+LA + QL ++ L Q + + W + +++ Sbjct: 530 EQDAGLFEGMASYEQVQGMNAEIAGNLAHFIDQLLTYQITLGQAQKINAWRTIINQLMDD 589 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 F L + E E + I Q Q + A + + ++ + L L + SQRFLAG Sbjct: 590 FLLVELEGELVVKSIRDQLQKLEENLEDAGFDAPISAPIINNYLKNNLSGGKASQRFLAG 649 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 VN CTLMPMRSIPF V+CLLGM DG YPR + GFDLM ++ K GDRSRRDDDRYLFL Sbjct: 650 KVNFCTLMPMRSIPFDVICLLGMTDGSYPRTMPVEGFDLMQKRMKPGDRSRRDDDRYLFL 709 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 EAL SA + Y+SYIGRSI+DN+E+ PSVLV EL++Y QS+ L GD LN +ES + Sbjct: 710 EALQSANKAFYLSYIGRSIRDNTEKAPSVLVSELLEYCQQSYCLDGDSELNPEESAKHLV 769 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE--TVPLE 835 LT H +P+ Q++ G+ SYA EWLP A G+A EF PE + L Sbjct: 770 KKLTIEHPLVPYSQQSF-VGDNTSYASEWLPTAKLEGQAAPEFQTEPLVFAPESKELELT 828 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE 895 LQRFW PV FF L+V F T +S + D EPF ++G + Y + +LL L+ DD Sbjct: 829 ELQRFWRLPVAYFFNRGLKVFFETVESRVEDDEPFSIDGRTGYGMKSELLEELLAYDDPN 888 Query: 896 -------RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG-----QSMEI 943 +++ +A G LP G+FGEI + + +++L D + + Sbjct: 889 QVFQLSREFYQQQKAQGKLPIGSFGEIAADKEVNTVKELVDHIQPLTTSPLEDQEVRLRF 948 Query: 944 DLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKD 1003 +++ GWL Q +G+LR+R + + + W++HL CA + LF D Sbjct: 949 TFPHGEMELQGWLKQRYKEGMLRYRGGKIRSHEVLATWIDHLCLCAMKQQQFTHLF-GTD 1007 Query: 1004 GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDST 1063 + F P+ E+A +L ++ Y G APL LP++ A L+ D + DDD T Sbjct: 1008 AIYHFEPIETEKAYQHLEVILSLYISGNCAPLPYLPKAALAGLEAHIDKK-GVWNDDDET 1066 Query: 1064 LQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 +KA K Y G GE + + R+W + E + I + ++ L ++ Sbjct: 1067 HEKALKKMADEYSGTRYA-GENSNDYVMRMWPEWNDELGQTIFDNAKNVLHDALLHSE 1123 >UniRef50_A5GC93 DNA helicase/exodeoxyribonuclease V, gamma subunit n=7 Tax=Geobacter RepID=A5GC93_GEOUR Length = 1091 Score = 1018 bits (2632), Expect = 0.0, Method: Composition-based stats. Identities = 388/1134 (34%), Positives = 592/1134 (52%), Gaps = 75/1134 (6%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L++Y SNR++ L + +VE+ L PF PE I+VQS GM +WL M L+++FG+ AN + Sbjct: 3 LKIYTSNRMETLVDQLAGVVEK-PLPSPFTPETIVVQSKGMQRWLAMELARRFGVWANGE 61 Query: 62 FPLPASFIWDMFVRVLPEI---PKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 FP P + + +F V+P++ P+ S+F+ ++W+LM LLP L F L YL DD Sbjct: 62 FPFPNAVVETLFRAVIPDLAETPQVSSFHPDVLTWRLMELLPSCLGGPGFEPLAGYLADD 121 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQ 178 D K QL+ K AD FDQY +YRP+ L WE G WQ LW+ LV Sbjct: 122 GDGLKRLQLAEKIADTFDQYTIYRPELLLSWEEGAEG-------GWQGLLWRELVRNATD 174 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 HRA L F + T LP R+ + GI LPP +++ L + + EI+L Sbjct: 175 -----RHRAALLAEFRRRINRPDTAAAELPRRISLIGIPTLPPFHMEVLSGIARQTEINL 229 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 NPCR YWG I LA+L R G + GNP Sbjct: 230 FLLNPCREYWGKIVSERELARLERR-------------------GLDEDPLHGYFETGNP 270 Query: 299 LLASWGKLGRDYIY-LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 LLAS G++GRD+ L+ D ++ D F ++ LLH IQ++IL+L +R AG Sbjct: 271 LLASMGRIGRDFFDSLIGDCGDAEFSDTFTEIRGSGLLHAIQANILDLRDRGAAG----- 325 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 ++ ++ D ++ H CHS RE+EVL+D++L++ + DPTL+PRDI+VM DI++ Sbjct: 326 -----DREVIEATDDTLRIHSCHSAMREIEVLYDQILSLFDNDPTLSPRDILVMTPDIEA 380 Query: 418 YSPFIQAVFGSAPA-DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y+P+I AVFG+ ++ +PY+I+DR R+ E +++L L SRF +VL +L+ Sbjct: 381 YAPYISAVFGTPEQPEQRIPYSIADRSLRREGETAEVLLAILQLCGSRFAITEVLDILEA 440 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 + RF +T++ L + QW+ + IRWGID +PA +++W+ GL R++LGYA Sbjct: 441 APVCRRFGLTDKDLETVHQWLTATNIRWGIDAMERTGHGVPAFSENSWQAGLDRLILGYA 500 Query: 537 MESAQGEWQS-VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 M + +LPYD G A L+G L + LA+ R +EEW V R +L Sbjct: 501 MAGEDRHFFGEILPYDHLEGSDALLLGRFLEFCETLFSRVQALARPRQIEEWTAVLRSLL 560 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 F D + E + + + + + A +G V + ++R L ++L E+ FL Sbjct: 561 GTFIKADGDDERDVATLLKVIERLDECRAHANFGGDVGIEIVRAWLGEKLGSEQRGFGFL 620 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 G V C ++PMRSIPF+V+ LLGMNDGV+PR+ P GFDL++ P+RGDRS+RD+DRYL Sbjct: 621 TGGVTFCAMLPMRSIPFRVIALLGMNDGVFPRRNRPHGFDLIAASPRRGDRSQRDEDRYL 680 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 FLEAL+SA+++ ISY+G+SI+DNSE PSVLV EL+DYI + G+EA Sbjct: 681 FLEALLSARERFSISYVGQSIKDNSELPPSVLVSELLDYIAKGFTRAGEEADET-----A 735 Query: 776 VKAHLTCLHTRMPFDPQNYQP--GERQSYAREW----LPAASQAGKAHSEFVQPLPFTLP 829 ++ H PF ++P G SY+RE L A + + +PLP Sbjct: 736 AVRGISVRHPLQPFSRDYFRPNDGRLFSYSRENLHGVLAAIAPPAVPATFLSRPLPPAEE 795 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV 889 V L L F+A+P + F + RL + D ++EPF L+ L +Y + Q+++ AL+ Sbjct: 796 TLVTLYDLAEFFANPCKHFLRRRLGIYLEQRDESFAESEPFSLDHLGKYMLGQEIVAALL 855 Query: 890 EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR--QPGQSMEIDLAC 947 + + R+ G+LP G G I ++T A++V A P +EIDL Sbjct: 856 AGESLDNHRAVARSRGELPPGECGTITYDTLASAASDFAEQVAAATVGAPLPPLEIDLEF 915 Query: 948 NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASG--GNGESRLFLRKDGE 1005 ++ G + ++ P+GL+ +R + L +++W+EH+ ++ G + L D Sbjct: 916 KESRLVGRIERIWPEGLVHYRYAKLKAKDRLRIWIEHICLTSAAPTGYPRTASLLASDVT 975 Query: 1006 WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQ 1065 P++ +L L QL+ YR GMSAPL P+S + + D + A Sbjct: 976 VAIAPVS--DSLALLEQLLTIYRRGMSAPLPFFPKSALEYARKANDPKKAA--------- 1024 Query: 1066 KARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRF 1119 KA + + G+ GE +D +YQR + P + S+ PL Sbjct: 1025 KALGDARKKWHGSEDYPGEKEDPYYQRCFGNEEP-LDGEFMALSRMVYDPLLAH 1077 >UniRef50_A4SSU8 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Aeromonas RepID=A4SSU8_AERS4 Length = 1134 Score = 1011 bits (2613), Expect = 0.0, Method: Composition-based stats. Identities = 486/1164 (41%), Positives = 666/1164 (57%), Gaps = 82/1164 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +YHSN+LD+L+ L+ + + L PFE E +LVQS GMAQWL++ L++ FGIAANI Sbjct: 1 MFTLYHSNQLDLLKELLVNHIRQAPLAHPFEQEQVLVQSPGMAQWLKLELAKAFGIAANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYL----- 115 +FPLPASFIW+MF RVL ++P++S +NK +MSW+LMT+LP LL+R F L YL Sbjct: 61 EFPLPASFIWEMFTRVLADVPRQSPYNKGAMSWQLMTILPALLDRPAFAPLAAYLGGGDE 120 Query: 116 ---TDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEA-------QAWQ 165 D ++ +L+QL K ADLFDQYLVYRPDW+A+WE G + G Q WQ Sbjct: 121 QDPAGDPEQVRLWQLCQKVADLFDQYLVYRPDWIARWEEGEGLVGTESQDLAGVSGQDWQ 180 Query: 166 APLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQ 225 LW+ LV T L +HRANLY+ FI L+ P LP RVF+ GISALPP Y++ Sbjct: 181 PELWRELVARTLALSPSGYHRANLYEEFIHELQRTRDLPGKLPQRVFVFGISALPPRYVE 240 Query: 226 ALQALGKH--IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 AL ALG +E+HL TNPCRYYWGD+ D LA+L + + Sbjct: 241 ALLALGSRPEVEVHLFVTNPCRYYWGDLLDRKTLARLENKLK------------------ 282 Query: 284 GQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDN------LLHN 337 + D Q NPLLAS GKLGRDY++ L +LE SQ ++AFVD+ + LL Sbjct: 283 -PGTDLDTLQGPANPLLASMGKLGRDYLHQLMELEVSQ-IEAFVDIDEVDASGNVRLLRA 340 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 IQ D+LEL +R + S +K P+DP D S+ H CH P RE+EVLHDRLLA+ Sbjct: 341 IQKDVLELGSRGEGQFD---LDSSYHKSPIDPADGSLQIHACHGPMRELEVLHDRLLALF 397 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 E DP+LTP+D++VM+ D++SY P+IQAVFG+ +P+A+SDR A Q P+L++F++L Sbjct: 398 ERDPSLTPKDVVVMMPDVNSYGPYIQAVFGA---RGQIPFAVSDRAASQESPLLQSFLAL 454 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L LP +R + ++LA+L+VP + RF++ ++ LR WV E+GIRWG+DD ELP Sbjct: 455 LHLPSARLGAGELLAILEVPAVLRRFELDDDEFNQLRVWVQETGIRWGLDDAYPERFELP 514 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGE----------------WQSVLPYDESSGLIAELV 561 ++W FGL RMLLG+AM + S+LPY E G + Sbjct: 515 RMSGNSWLFGLRRMLLGFAMGDGEPVAGMSFCADHGAGQQGAVASILPYAEIEGQQGLAL 574 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 G LA + L + L +E+ L EW D+L+ F+L D E E + LI Q Sbjct: 575 GKLAWFVDSLAEFLPRLQREQSLPEWSACLLDLLDRFYLADEEEERLLQLIRSQLADWQT 634 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 + A++ + LL+D L + L + R SQRFLAG VN CTLMPMRSIPFK VCLLGMN Sbjct: 635 QLGEARFDQPITADLLQDYLGKVLGESRSSQRFLAGQVNFCTLMPMRSIPFKQVCLLGMN 694 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 DGVYPR LAP+GFDLM+ +RGDRSRRDDDRYLFLEAL+SAQQ LYISY G S QDNS+ Sbjct: 695 DGVYPRTLAPMGFDLMAVASRRGDRSRRDDDRYLFLEALLSAQQGLYISYQGFSAQDNSD 754 Query: 742 RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG---E 798 + PSVL+ ELIDY+ Q L GDE L+ + S R+ HL H P+ + P Sbjct: 755 KVPSVLLAELIDYVRQGFVLAGDERLDDEASGERLLKHLVVEHPLTPYSRSYFYPEAESR 814 Query: 799 RQSYAREWLPAASQAGKAHSEFVQPLPFTL----PETVPLETLQRFWAHPVRAFFQMRLQ 854 +YA +WLPA + A + LP + + L L RF+ P + F RL+ Sbjct: 815 LFTYAADWLPALNPVRGAANFQSGELPLPPEWGREQGLELAELLRFYRQPAKYFLNRRLK 874 Query: 855 VNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE 914 V F ++ I D+EPF L+GL YQ+ LL++ + + D+ R + G LP G FG Sbjct: 875 VWFELNEANIEDSEPFELDGLQHYQLKALLLDSHLAEGDSAVRRERLQLTGLLPQGWFGS 934 Query: 915 IFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSV 974 + + EM +LA+R+ Q++EID++ Q+ GW+ Q LL +P + Sbjct: 935 LLLDDLDAEMGKLAERLRPWVSEKQAVEIDISLAQGQLQGWIDT-QKGRLLVVKPGSFNG 993 Query: 975 AQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAP 1034 + W++HL S G++ LF K R P L+A++A L+ L+ + +GM P Sbjct: 994 KDLLLGWIQHLCLSLSCAPGDTLLFDAK-QSLRLPKLSADEARPKLAALVALWAQGMKRP 1052 Query: 1035 LLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLW 1094 L P + WLK + A L + G MV GEG D++ R + Sbjct: 1053 LPFFPNTAWDWLKAMEKEPDKP--------DAADKAALTRFNGGWMVTGEGQDVYVARCF 1104 Query: 1095 RQLTPETMEAIVEQSQRFLLPLFR 1118 +L + + ++ L PL + Sbjct: 1105 PELDEAVLSQLQALAREHLPPLLK 1128 >UniRef50_C4L7B2 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L7B2_TOLAT Length = 1130 Score = 995 bits (2572), Expect = 0.0, Method: Composition-based stats. Identities = 469/1144 (40%), Positives = 655/1144 (57%), Gaps = 41/1144 (3%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M RVYHSN+LDVL++L+ +++ L E ILVQS GMAQWL+ L+Q G+AANI Sbjct: 1 MFRVYHSNQLDVLKSLLAHLIQLSPLQPALAAETILVQSPGMAQWLKQALAQDLGVAANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FPLP+SFIW MF +VLPE+P+E+ + K +M W+LM LLPQ ++ F L YL +D D Sbjct: 61 TFPLPSSFIWQMFHQVLPEVPQENPYTKPAMLWRLMQLLPQCMDDVLFAPLAGYLAEDHD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 R+ +QL + ADLFDQYLVYRPDW+ WE+G E Q WQ LW+ LV + Sbjct: 121 GRRCYQLCQRIADLFDQYLVYRPDWIVDWESGG--AQGAETQLWQPVLWRKLVA-LTEQQ 177 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 HR NL+ FI TL++ LP R+F+ GIS+LPP YL+AL ALG+H E+HLL Sbjct: 178 ASHLHRVNLFSSFINTLKAGK-PKAVLPQRLFVFGISSLPPHYLEALMALGEHCEVHLLL 236 Query: 241 TNPCRYYWGDIKDPAYLAKLLTR----QRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 TNPCRYYWGD+++ + + + QRR ++ E E Q SD + G Sbjct: 237 TNPCRYYWGDLQEENQINQRVLNKLLAQRREQWQQAEQHKPLLPETDWQQLFSDEGEQQG 296 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 NPLL S GK GRDY+ LL+++ ++ E+DAF ++ D+ L + ++ Sbjct: 297 NPLLVSLGKQGRDYLSLLAEISAA-EIDAFAEINGDS----------LLHLLQQDLLELQ 345 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + +R KRP+ D S+ H CHSP REVEVLHD+LL DPTLTP++++VMVADI+ Sbjct: 346 DGTRLRPKRPISASDRSLVLHGCHSPLREVEVLHDQLLQRFAADPTLTPKEVVVMVADIN 405 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y P++QAVFG+A +RY+P++ISDR A Q +P+L++F++LLSLPD R + ++L LL V Sbjct: 406 RYGPYVQAVFGNATGERYIPFSISDRSATQENPLLQSFLTLLSLPDQRCTATELLELLAV 465 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P L RF + E L LR+W ESG+RWG++ + ELP +HTW FGL RMLLG+A Sbjct: 466 PALLKRFGLAEADLTTLRRWAMESGVRWGLESGDGERFELPPRERHTWSFGLERMLLGFA 525 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 + + V PY G A +G LA + Q+ R L RP+ EW + +L Sbjct: 526 SGNE-TLFADVAPYTAIEGQNAVKLGQLARFIAQVMALRDELETARPITEWQNLVDRLLL 584 Query: 597 AFFLP----DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 F+LP + + AA+ LI Q+ QY + +PL++ D L L+ R Q Sbjct: 585 DFYLPQEQLEEDDAAALNLIRSTLQSWQQRLSQMQYQEPLPLTVFHDHLQSELNAVRGGQ 644 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 +FLAG VN CTLMPMR+IPF++VCLLGMNDG+YPR + PLGFDLM+ +P++GDRSRR+DD Sbjct: 645 QFLAGRVNFCTLMPMRAIPFRLVCLLGMNDGLYPRSMPPLGFDLMADQPRKGDRSRREDD 704 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 RYLFLEAL++AQQ+LYISY+ S DN + PSVLV EL++Y ++ LP DE E Sbjct: 705 RYLFLEALLAAQQQLYISYVAHSAIDNRDLMPSVLVTELVEYCQRAFLLPEDEEKAETEQ 764 Query: 773 EARVKAHLTCLHTRMPFDPQNYQP------GERQSYAREWLPAASQAGKA---HSEFVQP 823 E + HL H +P+D + + P + SYA EWLPA + G+A + P Sbjct: 765 ETALHQHLLTGHPLVPYDRRYFSPTVPPATADLFSYAAEWLPALTPTGQAGFFDARLSLP 824 Query: 824 LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 + L RF+ +PV FF+ RL+V F ++ + +TEPF L+ L +YQ+ ++ Sbjct: 825 EELQGKPEIELADWLRFFRNPVAGFFRRRLRVQFVEREAALEETEPFWLDKLQQYQLRER 884 Query: 884 LLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC-RQPGQSME 942 LL D R A G LP G FG + + + + LA + Q Sbjct: 885 LLRYQRLDVDQAVWQARLLAEGMLPDGEFGRLALQADAKNLAPLAAALQTWPLATAQRET 944 Query: 943 IDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRK 1002 L G Q+ G + +V L+R R S L + + +WLEHL A+G + L Sbjct: 945 FHLDFAGWQLLGSVGEVYAGQLVRHRVSKLKASWLVAIWLEHLALSAAGKLTQPTRLLAL 1004 Query: 1003 D----GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAML 1058 D GEW L+A+ A L + + EGM PL + + WL+ L Sbjct: 1005 DNGKLGEWLLAVLSADAAREQLLLWWQAFTEGMQRPLCLPVNTAWQWLEKATT--ESGCL 1062 Query: 1059 DDDSTLQKARTKFLQAYEGNM-MVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLF 1117 DD+ +AR + Y G+ V GEG D + R + +L+ E E I E + + LLPL Sbjct: 1063 GDDAQQLQAREAAQKTYTGDGTFVSGEGQDTYLARCFPELSSEYWEEIEEWAVQLLLPLR 1122 Query: 1118 RFNQ 1121 + Q Sbjct: 1123 QHLQ 1126 >UniRef50_A1AQY6 DNA helicase/exodeoxyribonuclease V, gamma subunit n=2 Tax=Desulfuromonadales RepID=A1AQY6_PELPD Length = 1061 Score = 974 bits (2517), Expect = 0.0, Method: Composition-based stats. Identities = 367/1121 (32%), Positives = 544/1121 (48%), Gaps = 93/1121 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L + SNR++ L + +++ L PF PE+++VQS GM +WL M L++ FG+ AN Sbjct: 3 LTICTSNRMENLVEALCDVLKT-PLSSPFTPEILVVQSKGMQRWLAMKLAETFGVWANCT 61 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 +P P +W++F++ PE+P S F+ + M+W++M LLP L R++FT L HYL D D Sbjct: 62 YPFPNKVVWELFMKAFPELPDTSRFSPEVMTWRIMGLLPAFLGRQEFTPLNHYLDGDGDG 121 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 K FQL+ K AD FDQY ++RP+ L WE G + WQ LW+ L Sbjct: 122 LKKFQLAGKIADTFDQYTLFRPNMLLDWEGGKGGD-------WQELLWRELA-----TAD 169 Query: 182 PRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 HR + Q FI+ L LP R+ + GIS LP +L + KH + L Sbjct: 170 NGQHRGRIKQDFIKLLAQGHAEKESLPERIMVFGISYLPSYHLDIFTEIAKHTTVSLFLL 229 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA 301 +PCR YWGDI +++ +R + GNPLLA Sbjct: 230 SPCRQYWGDIVSAKQMSRRPPEER-------------------------AYLEEGNPLLA 264 Query: 302 SWGKLGRDYIYLLSDLES--SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 S GKL RD+ ++ + S + ++D ++D LL IQSDIL L Sbjct: 265 SLGKLARDFSNMVVEAGSIATDDVDLYLDPGEGLLLEAIQSDILNLR----------GTE 314 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 D+KR + P D S+ H CHSP RE+EVLHD LL +LE++ LTPRDIIVM DI++YS Sbjct: 315 GGDSKRRISPQDRSVQIHACHSPMREIEVLHDNLLFLLEQEKGLTPRDIIVMTPDIETYS 374 Query: 420 PFIQAVFGSAPAD-RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 P+I VFG + +P++I+DR + + + LL LP SR V +L Sbjct: 375 PYISMVFGGCQDPLKKIPFSIADRTLAKEGQIASVILKLLELPGSRLSVTRVFDILQSAP 434 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 ++ RFD+ + L +R W+ ++ IRWG D+ + L LP +++WR GL R++LGYAM Sbjct: 435 VSRRFDLDIQELETVRSWIEDTRIRWGADESHRSSLGLPHYRENSWRAGLDRLMLGYAMP 494 Query: 539 SA-QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + +LPYDE G + +G LA + ++ R LA +R L EW ML+ Sbjct: 495 EEGDFLFHGILPYDEMEGDATQALGKLAEFVARIERLARDLAAKRTLTEWRDAITTMLSD 554 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 F D + + I Q++ G A + + V L ++R LA RL +E FL G Sbjct: 555 FAAADDDLAHELASINGVVQSLEDLGAKAGFSETVDLVVIRSWLASRLGEEEKGLGFLTG 614 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V C ++PMRSIPF+VVCL+GMND +PRQ P GFDL+++ P+ GDRS RD+DRYLFL Sbjct: 615 GVTFCAMLPMRSIPFRVVCLIGMNDAAFPRQSRPPGFDLIARNPQPGDRSLRDEDRYLFL 674 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 E L+SA+ Y+SY+G+S++DNS PSVLV E +D IG E ++ Sbjct: 675 ECLLSARTHFYLSYVGQSVKDNSAIPPSVLVSEFLDAIGAGFT----------SGEMTLE 724 Query: 778 AHLTCLHTRMPFDPQNYQP-GERQSYARE----WLPAASQAGKAHSEFVQPLPFTLPE-- 830 L H F + SY+ E L A ++G+ PL E Sbjct: 725 QRLVTSHRLQAFSRSYFDATSGLFSYSAENCAALLDATQRSGEPALFITHPLKAAPEEMR 784 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE 890 V L L RF+A+P + + RL++ + + D EPF +EGL Y INQ+LL ++ Sbjct: 785 EVTLAQLVRFYANPAKYLLENRLKIRLEEVSTPLDDREPFAVEGLEAYGINQELLEKRLQ 844 Query: 891 QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME---IDLAC 947 L+ R G LP GE + E+ L ++ +E Sbjct: 845 GGSVHGLYATTRCRGILPPAQHGETVFADALAEVDNLVKKIGERTGGQPRLEAFFFHETI 904 Query: 948 NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASG--GNGESRLFLRKDGE 1005 +++G L + + + +R + L ++ W+EHL+ A G L + KDG Sbjct: 905 GDFKLSGSLDGIWKERKISYRCAKLKAKDEIRGWIEHLLLNAFAPEGYPRESLVIMKDGS 964 Query: 1006 WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQ 1065 F P+ E L L++ Y +G+ PL P S + + Sbjct: 965 TGFGPV--EHPTEQLGALLDCYWQGLHLPLRFFPASSLEFASSG---------------- 1006 Query: 1066 KARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIV 1106 + +E M GE D ++ + Q + Sbjct: 1007 -LLKNARKKWESGYMHTGEEADPHFRLCFEQDADPLNKEFE 1046 >UniRef50_Q2LTC9 Exodeoxyribonuclease V gamma chain n=2 Tax=Bacteria RepID=Q2LTC9_SYNAS Length = 1113 Score = 972 bits (2514), Expect = 0.0, Method: Composition-based stats. Identities = 381/1143 (33%), Positives = 571/1143 (49%), Gaps = 71/1143 (6%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L + SNR++VL + ++ L P PE+I+VQS GM +W+ M L+ GI AN+ Sbjct: 4 LNIIASNRMEVLAEKLADVLAG-PLSSPLTPEIIVVQSRGMERWVSMQLAAFHGICANVR 62 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 FP P I D+F VLP E FN + +W++M+LL R F L YL DDS Sbjct: 63 FPFPRRMIQDIFHAVLPGWEAEQDFNPELAAWRIMSLLTVASSRPGFEPLAAYLHDDSQG 122 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 K FQLS + A LFDQYL++RP+ + WE G+ +WQA LW+ VE Sbjct: 123 LKRFQLSRQIARLFDQYLIFRPEMILNWEKRISD---GDEYSWQADLWRLFVEEGK---- 175 Query: 182 PRWHRANLYQRFIE-TLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 H A L + + LP R+ I GIS LPP YL A+ +E++ Sbjct: 176 -IVHPAVLRLSLQDVMIRRGNQLSACLPERISIFGISYLPPFYLDIFLAVSSFMEVNFFL 234 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NP R +W DI+ +++ + + +L S+ + GN LL Sbjct: 235 LNPSREFWFDIRSSREISREVKLVKGS---------VEKGMENEELSRSELYLEEGNSLL 285 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 AS G LGR++ L + +E + +V+ +LLH IQSDIL L Sbjct: 286 ASLGTLGREFWSFLGECSGREE-EYYVEPGETSLLHAIQSDILNLREGGGEA-------D 337 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 +D + + + S+ H CHSP REVEVLHD LL +LE DP+L P DI+VM +I++Y+P Sbjct: 338 ADGREVMFSEERSLQIHACHSPMREVEVLHDSLLDLLEADPSLQPHDIVVMTPEIETYAP 397 Query: 421 FIQAVFGSAPAD-------RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 FI AVF + D +PY I DR PVL + +L LP RF + +VL+L Sbjct: 398 FITAVFETVDEDAPGLVDQPKIPYHIVDRATISGRPVLGGLLKILDLPLGRFAAGEVLSL 457 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 L+V + RF +TE + + +WV +SGIRWGID+ + LP ++W++GL RMLL Sbjct: 458 LEVAAIRNRFGLTEADIDQVSRWVADSGIRWGIDERSRLREGLPEIATNSWQWGLKRMLL 517 Query: 534 GYAMESAQ-GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 GYA+ + + ++P + + G A L+G LA +L + L+Q+R L +W + Sbjct: 518 GYALPARNNELFSGIMPCETAEGSEARLLGILAEFTERLFLTAESLSQDRTLSDWGSLLD 577 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 D+ + FFL D ++E + + Q + + + + L+++R L R Sbjct: 578 DISDRFFLGDEDSEPDIRNLRQLASDLKNLQEKTGFPEKISLAIVRSFLQDRFQATGADG 637 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 FL+ V C+L+PMRSIPF+V+CL+GMN+G YPR+ FDLM++ P+RGDRSRR+DD Sbjct: 638 GFLSRGVTFCSLLPMRSIPFRVICLMGMNNGDYPRRPQTPSFDLMARHPRRGDRSRRNDD 697 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 RYLFLEAL+SA+ LYISY+G+S++DNS PSV+V EL+DY+ + L Sbjct: 698 RYLFLEALLSARDTLYISYVGQSMEDNSRIPPSVVVSELLDYVRRGFVLKDCN------- 750 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPG--ERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE 830 + L H F P + SY+ E AA+ K S + +P E Sbjct: 751 ---IDELLITYHPLQAFSPVCFTEESCRLFSYSEENRKAANTLLKRSS--LTSIPGAEAE 805 Query: 831 TV----------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQI 880 + + L F+ HP R F Q RL V D + + E F +EGL RY I Sbjct: 806 RLPEDPAMATQATIRDLIAFFRHPARFFLQRRLAVFLGEADIVLEENEHFDVEGLDRYGI 865 Query: 881 NQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI--ACRQPG 938 Q L+ +E E ++ A G LP+GA G+ ++ +++ + Sbjct: 866 EQLLMEKEIETGHMEEVYPVLAAQGLLPHGAVGQSRFDALKRDICHFVRSYKHILHSENI 925 Query: 939 QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN---GE 995 +IDL G +++G L + GLL +R + L ++LW+ HL+ A+ G Sbjct: 926 PPRDIDLEVAGFRLSGRLEGLGSRGLLHYRYATLKGKDHLKLWIMHLLLHATDGPDGGDR 985 Query: 996 SRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQND 1055 L L K+G WR+ + ++A +L +LI YREG+ PL PE+ A+ Sbjct: 986 ESLLLGKNGLWRYSAI--DEARCHLEKLISLYREGLCRPLHFFPETSWAYAVKILRNGEL 1043 Query: 1056 AMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLP 1115 + ++S +A+EG+ RGEG D + + + +P+ + E S P Sbjct: 1044 SEEAEESA----WDAARKAWEGDDFQRGEGVDHYNRLCFGDFSPQDV-EFQELSLNVYRP 1098 Query: 1116 LFR 1118 L Sbjct: 1099 LLE 1101 >UniRef50_B8CMV5 Exodeoxyribonuclease V, RecC subunit n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CMV5_SHEPW Length = 1224 Score = 967 bits (2500), Expect = 0.0, Method: Composition-based stats. Identities = 397/1222 (32%), Positives = 625/1222 (51%), Gaps = 131/1222 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEP-EMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML + SN+++ L ++ + P E ILVQS GM+ WL++ ++++ IAA Sbjct: 1 MLYLVQSNQMEALSQILATELTTPLPGAPLLLPEHILVQSPGMSTWLRLEIARQNNIAAA 60 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD- 118 ++FPLP+SFIW + +L ++PKE+AF K +++WKLM LLP L++++DF L +YL + Sbjct: 61 LEFPLPSSFIWQLCHTLLEDVPKENAFTKAAITWKLMELLPSLIDQDDFAPLANYLNNGN 120 Query: 119 --------------------------SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETG 152 KL+QL + AD+FDQYLVYRPDW+A WE Sbjct: 121 QGHGENDLQSQYLEIDTSETISASHPQSPLKLYQLCGQIADIFDQYLVYRPDWIAAWEAN 180 Query: 153 HLV-----EGLGEAQAWQAPLWKALVE-YTHQLGQPRWHRANLYQRFIETLESATTCPPG 206 + L AQAWQ LW+AL++ + L + ++HRANL+Q + L+ T Sbjct: 181 EPTLPPKGDKLAPAQAWQPILWRALIQFNANTLHKSQYHRANLHQALFDKLDDPNTSMTS 240 Query: 207 LPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRR 266 LP R+F+ GIS++ P L L L K I++ +L +PC++YWGDI DP A++ + Sbjct: 241 LPRRLFVFGISSMAPQTLDVLHHLAKRIDVIMLSLSPCQHYWGDIVDPRLRARMALQYAN 300 Query: 267 HSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE---L 323 + E + + +VGNPLLA+ GK+GR+ + L+ +L L Sbjct: 301 KQKLEVE---------------WEDKLEVGNPLLANNGKMGRELLDLMLELPEEHTAFNL 345 Query: 324 DAFVDVTPDNLLHNIQSDILELENRAV-AGVNIEEFSRSDNKRPLDPLDSSITFHVCHSP 382 D + D D +LH +Q DIL+L R G + + D +R L D SIT CHSP Sbjct: 346 DCYQDPGIDCMLHGVQHDILQLSTRGQCLGPDASLYLTVDGRRMLQQDDHSITIRSCHSP 405 Query: 383 QREVEVLHDRLLAMLEE-----DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 REVE LHD LL ML + L P+DI++M+ D+ +Y+P+I AVF + Y+PY Sbjct: 406 LREVETLHDHLLEMLSKQTDSKGQPLAPKDIVIMMPDVAAYAPYIDAVFSAKQGSHYIPY 465 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 AI+DR A Q P++ +F+ LL++ SRF D++ +L+VP + RF++ ++ L L++W+ Sbjct: 466 AIADRGAVQESPLIASFLHLLNINQSRFGLTDIIGILEVPSVLRRFELDDDSLTILKRWL 525 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 ++G+RWG D + E +LPA Q+ W G+ R++LGY+ +Q L + G Sbjct: 526 EQAGVRWGRDGASRAEHQLPAFEQNAWALGIKRLILGYSFADNSPLYQQTLAVNGIEGQT 585 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 A+ +G L + L+ LAQ L E + +L AF+ D + + + I Sbjct: 586 AQALGKLLDFIEALDDVHAALAQNCSLTERIEQLEQLLAAFYSVDDDEQVQLQEIRDAIV 645 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 + E + + +P+ +L++ RL + R+ QR+LAG +N CTLMPMRSIPFK+VCL Sbjct: 646 TLAEELTESGHTTPLPIEVLQNWFNSRLSESRVGQRYLAGSINFCTLMPMRSIPFKIVCL 705 Query: 678 LGMNDGVYPRQLAPLGFDLMSQ-KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 LGMNDGVYPR P+GFDL++Q P++GDRSRR DDRYLFLEA++SA+Q+LYISYIG S Sbjct: 706 LGMNDGVYPRVQHPVGFDLVAQMDPRKGDRSRRLDDRYLFLEAILSARQQLYISYIGNSE 765 Query: 737 QDNSERFPSVLVQELIDYIGQSH---------------YLPGDEALNCDESEARVKAHLT 781 +D+SER PS+LV EL++Y ++ Y + A+ D+ E + L Sbjct: 766 RDDSERIPSMLVSELVEYCQLAYLPAKLALESKASADNYSKQEAAVFVDKIEQAISTQLI 825 Query: 782 CLHTRMPFDPQNYQPGE-------RQSYAREWLPAASQ------AGKAHSEFVQPLPFTL 828 C PFD + Y +QSY+ +W P A A K+ + F+ L Sbjct: 826 CKQPLQPFDERLYHSAHISDSFPLQQSYSAQWCPVAVSQTTTDIADKSSNRFINLDTCLL 885 Query: 829 P---------ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 E + L L RF+ +P + +F L+V+ + EPF L L RYQ Sbjct: 886 NTAQSDSEEVEEIELSALIRFFRNPAQYYFNRTLKVDLSINVRADDNDEPFSLNALERYQ 945 Query: 880 INQQLLNALVEQD---DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ 936 + L+ +E L R +A G++P F ++ ++ L R + + Sbjct: 946 LQSILIEHAIENQTESPDGELLERLKAQGNIPLKPFDDLLLSQYLHDITPLIGRSLYLKG 1005 Query: 937 P-GQSMEIDLAC-----------NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 QS+EI + +++ G + + GL+ +RP + ++++L H Sbjct: 1006 ESSQSIEIAIDIALVDGSKPVTDQSIKLVGRIDDLSAKGLVNYRPGTANGRDLIRVYLRH 1065 Query: 985 LVYCASGGNGESRL-------FLRKDGEWR-FPPLAAEQALHYLSQLIEGYREGMSAPLL 1036 L CA G+ + +L G + F P+ A QA LS + +++G PL+ Sbjct: 1066 LCLCAMQGSTDITRLNQPINSYLLDIGHFHVFAPITAAQAKSQLSLWLTLFKQGQVQPLM 1125 Query: 1037 VLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ 1096 +P + A+++ + + + + GEG + +QRL+R Sbjct: 1126 FMPRTALAYVEA------------EGDHTQKLREAQPKWLDEQSQLGEGMEPHFQRLYRF 1173 Query: 1097 LTPETMEAIVEQSQRFLLPLFR 1118 + + + +Q L PL Sbjct: 1174 PEDFSEQHFGDTAQTLLSPLIS 1195 >UniRef50_A6W0B0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Marinomonas RepID=A6W0B0_MARMS Length = 1131 Score = 966 bits (2497), Expect = 0.0, Method: Composition-based stats. Identities = 433/1155 (37%), Positives = 639/1155 (55%), Gaps = 61/1155 (5%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M ++Y SNRL+ L L+ I+ ++PF+ E ILVQ+ GMAQWL+M L++ IAA + Sbjct: 1 MFQLYTSNRLEDLAVLLAKILAVSPPENPFDDEFILVQNPGMAQWLKMFLAESHSIAAGL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FPLP++F+W F + L +IP +S FNK + W+LM LL L +F L YL +D Sbjct: 61 VFPLPSTFVWQTFAQSLDDIPAQSEFNKPFLVWRLMRLLDSRLGDPEFQALSWYLEEDDT 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEG----LGEAQAWQAPLWKALVEYT 176 + + FQL S AD++DQYLVYRPDW+ WE G + + E Q WQA LW+ LV Sbjct: 121 QIRRFQLCSSIADIYDQYLVYRPDWIKSWEGGEAQDPKLTAIFEQQPWQAILWRDLVADV 180 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL--GKHI 234 Q G +HR NL + + +S+ P G+P R+FI G+S+LPP L++L+ L I Sbjct: 181 SQRGTSLYHRGNLIEALHDKTQSSA-RPVGVPERIFIFGVSSLPPNTLESLRVLAASGWI 239 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 ++HL NPCR+YWGD+ D YL + + RQ ++D Sbjct: 240 DVHLFLQNPCRFYWGDVVDKHYLGREIKRQ-----------------TLKPGLSTDTLHL 282 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPD---NLLHNIQSDILELENRAVA 351 NPLLASWG+LGRDYI L ++ + EL F D + LL IQ D+L LEN Sbjct: 283 DANPLLASWGRLGRDYIAQLQEMADN-ELVVFEDYRTEQSTGLLQWIQQDVLTLENHGSQ 341 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + + + P+ D SI H+CHSP REVEVLHD+LL M E DP+LTP+DIIVM Sbjct: 342 QERDAKIRDASYRHPIAADDQSIRVHLCHSPLREVEVLHDQLLQMFESDPSLTPKDIIVM 401 Query: 412 VADIDSYSPFIQAVF----GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 + D+++YSPF++AVF GSA +++P+A+ D+ +P+++A++ LL L +SRF Sbjct: 402 LPDVNTYSPFVKAVFGSVKGSAQGRKHIPFALIDQSGGMENPIVDAYLYLLGLGESRFTL 461 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 +++++L+VP + ARF++T + L +RQW E GIRWG+D ++ +LP HTW G Sbjct: 462 SELISVLEVPAVLARFELTADELERIRQWSTEVGIRWGLDGKTAQQHDLPMQESHTWLNG 521 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 + RMLLGYAM W+ L Y + GL A + G LA L+ +N + L + +EW Sbjct: 522 VRRMLLGYAMG-HDHIWEGTLSYGDVEGLEASVAGKLAEFLVAINDAQAKLMESLAPKEW 580 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 + + FFL D + L+ +Q A+ + A + + +LR L+ L + Sbjct: 581 ISTLYYLAERFFLVDEDDA-FPALLSKQLDALTLQWQQAHFDAPLDQQVLRQLLSPLLQE 639 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + QRFLAG VN CTLMPMRS+PFKV+C+LG+N+G YPR +AP+GFDLM + + GDRS Sbjct: 640 SQGGQRFLAGRVNFCTLMPMRSVPFKVICVLGLNEGDYPRSVAPMGFDLMVGQYRSGDRS 699 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 RR+DD+YLFLEAL+SA+ YISY+GRSIQDNSE+ PS+LV EL++YIGQS GD+AL Sbjct: 700 RREDDKYLFLEALMSARDCFYISYVGRSIQDNSEKNPSILVSELLEYIGQSCVFEGDQAL 759 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGE-------------RQSYAREWLPAASQAG 814 D+++ + L H PF+ Y + SY +WLPA Sbjct: 760 TPDDAQKALLEKLILEHPLQPFNAAYYFQPQGSSHESTDQFDKRLYSYDEQWLPALLSVP 819 Query: 815 --KAHSEFVQPLPFTLPE-TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI 871 + F P + L+ L RF HP R F Q RL+ ++ E + EPF Sbjct: 820 VDEEAQAFSPLEGLEQPRIDLALDELSRFIGHPTRYFTQRRLKAYLSLQEEEEKEDEPFA 879 Query: 872 LEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV 931 L+GL+ YQ+ + LL A+++ D ++ R G LPYGA G + + + +QL + Sbjct: 880 LDGLAGYQLREGLLQAMLKG-DEDQFVERLSLMGALPYGALGRLSLQQSRGQCRQLLSVL 938 Query: 932 IAC-RQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCAS 990 + + +E++LA + + WL L +R LS Q MQ+W+EHL CA Sbjct: 939 QGYALEECEPIEVNLAMGSIVLQAWLDLPTATTRLSYRIGDLSAHQKMQMWIEHLALCAQ 998 Query: 991 GGNGESRLF-LRKDGEW---RFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWL 1046 G E L L K G+ F + A YL+ ++ ++G+ P+ + +S AW Sbjct: 999 GTPKEHHLINLTKTGKLLQHSFIIIPPNDAQDYLNTMLALLQQGLCQPIALPAKSADAWC 1058 Query: 1047 KTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIV 1106 K+ ++ + D D ++A + + R E DD ++QR + L + + V Sbjct: 1059 KSYCSSKT--LEDADIAWEQALKLYQD--NSSAFTRSEVDDAYWQRYFPDLNRQKAQ-FV 1113 Query: 1107 EQSQRFLLPLFRFNQ 1121 ++ LP+ R + Sbjct: 1114 SLCEQIWLPMHRHLE 1128 >UniRef50_Q1LST9 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Baumannia cicadellinicola str. Hc (Homalodisca coagulata) RepID=Q1LST9_BAUCH Length = 1098 Score = 962 bits (2487), Expect = 0.0, Method: Composition-based stats. Identities = 495/1132 (43%), Positives = 706/1132 (62%), Gaps = 51/1132 (4%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +Y SN+LDV+ +++ ++ +L + +PE+ILVQ+ + QWLQ+ L+ GIAANI Sbjct: 1 MFTIYQSNKLDVITSILISLISERKLRETLQPEIILVQNHNITQWLQVELAMSLGIAANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 F P FI+ + +LPE+ E F++ +SWK+ +LP ++ + +L+R YL +D D Sbjct: 61 RFSTPTIFIYKLLSSILPEMNLEMFFSRSLISWKIRLILPHFYDQPNCSLIRQYLHNDVD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 KRK F LS K ADLF QY +YRPDWL W+ G V LG Q WQA LW+AL+E Sbjct: 121 KRKQFHLSEKIADLFYQYFLYRPDWLEIWQQGKRVASLGPDQNWQALLWRALIEENMLS- 179 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 NLYQ FI+ ++ T P GLP R+FI +S+LPP+YLQ LQAL HI+IH + Sbjct: 180 ------TNLYQLFIQAMKHMTVRPSGLPDRIFIYAVSSLPPIYLQVLQALSNHIDIHFML 233 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NP R R + S+ + + ++ + NPLL Sbjct: 234 VNPYR---------------FNRINKQSYTQQPIYSTNTNQKSI------------NPLL 266 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 WGK G+D I LLS+L++ Q++DAFV+ L +S + L+ + + Sbjct: 267 EYWGKQGKDTISLLSELKNIQKIDAFVE------LSQEKSLLSLLQLDILEDNIVCHLHN 320 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + KR L D S++ +VCHSPQRE+EVLHD +LAM+ ++ +L P +IIVMV DI+ Y P Sbjct: 321 AKVKRLLQHNDHSLSINVCHSPQREIEVLHDAILAMIAQEQSLLPCEIIVMVTDINLYIP 380 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 I+AVFG+A DRYLP+ I DR + ++PVL F+ LL LP SR E+VL+LLD VLA Sbjct: 381 AIKAVFGNATTDRYLPFTIYDRTVKHTNPVLSVFLRLLKLPFSRLTIEEVLSLLDTSVLA 440 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 F I++ L LR+W+ ESGIRWG+DDD R+L LP T QHTW FGL RMLLGYA++S+ Sbjct: 441 KHFSISQIDLTILRKWIVESGIRWGLDDDTQRDLMLPTTSQHTWEFGLNRMLLGYAIDSS 500 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 G WQ +LPYDESSG AEL+G+LA L+M+L WR+ L + R L EWL DM+ FF+ Sbjct: 501 NGIWQGILPYDESSGKRAELIGNLAELIMRLRRWRKNLKKPRKLTEWLHCASDMIKDFFV 560 Query: 601 --PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 + E E A+ +I QWQ I+ G+ A Y V ++ L DEL RL Q+ ++Q F++ Sbjct: 561 TNVNKEVETALVIILDQWQQILQCGIKANYDQPVSIARLYDELNMRLQQKHLNQSFISSN 620 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 + CT+MP SIPFKV+CLLGMNDG+YP + PL FDLM Q+P+RGD +R D+DRY+FLE Sbjct: 621 IIFCTIMPTSSIPFKVICLLGMNDGIYPHSILPLNFDLMKQQPRRGDYNRYDEDRYIFLE 680 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 L+SAQQKLYIS+IG IQDN+ R PS+L+ EL +YI Q+ YL GDE L+ ++ Sbjct: 681 LLLSAQQKLYISFIGYFIQDNTLRSPSILISELTNYITQNFYLSGDEQLDEHTCNLHIRK 740 Query: 779 HLTCLHTRMPFDPQNYQPGERQ-SYAREWLPAA----SQAGKAHSEFVQPLPFTLPET-- 831 HL H+RMPF P+N+ PG S+A+EWL AA + F+ T + Sbjct: 741 HLWQWHSRMPFAPENFIPGSINQSFAKEWLLAAKASFRSNNTQNRFFMNKSLATKKQENM 800 Query: 832 VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ 891 + L L++F+ HPVR +FQ RL + E +I + EPFI++G+S Y+I +++LNAL+E Sbjct: 801 LLLANLKKFYQHPVRTWFQQRLDLWLYNEPQDISENEPFIVKGISHYKIKEKILNALIEG 860 Query: 892 DDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC-RQPGQSMEIDLACNGV 950 + + ++++ RAAG L YGAFG+++W QC +M L D++ + +I L + Sbjct: 861 KNLDVIYQQVRAAGLLAYGAFGKLYWTKQCSKMIYLVDQIRTYILPEQHTEKIQLNIDNT 920 Query: 951 QITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPP 1010 + GWL ++Q +GL+RW P LS+ G+QLW+EHL YCA GGNG+SR+F + +W FP Sbjct: 921 VLIGWLSKIQCNGLVRWYPHNLSMKHGLQLWIEHLAYCAIGGNGQSRMF-GTNSQWCFPV 979 Query: 1011 LAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTK 1070 L++++A YL LI+GY +GMS PLL+L SGGAWL C++ + + + + AR Sbjct: 980 LSSDEAKKYLLTLIKGYWQGMSEPLLLLNRSGGAWLTHCFNKKTRMINWEKDCQRTARNY 1039 Query: 1071 FLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS 1122 ++A+EGN + GE D++ Q+L QL + AI++ + + LP +FN S Sbjct: 1040 MIKAWEGNHLFPGESSDLYLQKLILQLNENYIIAIIKAVECYFLPPLKFNIS 1091 >UniRef50_A3QEU7 Exodeoxyribonuclease V, gamma subunit n=4 Tax=Shewanella RepID=A3QEU7_SHELP Length = 1192 Score = 961 bits (2484), Expect = 0.0, Method: Composition-based stats. Identities = 398/1202 (33%), Positives = 608/1202 (50%), Gaps = 111/1202 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERE-RLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML + SNR++ L L+ ++ P E ILVQS GM+ WL++ ++++ +AA Sbjct: 1 MLYLVQSNRMEALAELLANELQTPLPGQSPLSNEQILVQSPGMSTWLRLAIAKQNQVAAA 60 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD- 118 ++FPLP+SFIW + ++LP++PKE+AF K +M+WKLM LLP LL +E F L +YL DD Sbjct: 61 LEFPLPSSFIWQLCHQLLPDVPKENAFTKPAMTWKLMELLPGLLSQEVFAPLANYLKDDA 120 Query: 119 -------SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL-----VEGLGEAQAWQA 166 KLFQL S+ AD+FDQYLVYRPDW+ WE G L Q WQ+ Sbjct: 121 ILTDSAAPHSLKLFQLCSQIADIFDQYLVYRPDWILAWEQGEDRLPPKERPLDANQQWQS 180 Query: 167 PLWKALVEYTHQ-LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQ 225 LW+ L+ Y H L Q R+HRANL+Q + L LP R+F+ GIS++ P L+ Sbjct: 181 LLWRELIHYNHHTLNQSRYHRANLHQALFDALSDPLCDLSKLPPRLFVFGISSMAPQTLE 240 Query: 226 ALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQ 285 L L K I++ +L +PC++YWGDI DP A++ + + Sbjct: 241 VLYFLAKRIDVVMLNLSPCQHYWGDIVDPKLRARMALQY---------------GDKQQL 285 Query: 286 LFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE---LDAFVDVTPDNLLHNIQSDI 342 + + + +VGNPLLA+ GK+GR+ + L+ +L + + + D ++LLH +Q DI Sbjct: 286 AIDWESKLEVGNPLLANNGKMGRELLDLILELPENDTNFNFECYQDPGSNSLLHGVQQDI 345 Query: 343 LELENRAV-AGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 LEL R G + E + + +R L D S+T CHSP RE+E LHD LL L + Sbjct: 346 LELCTRGETLGPDAELYLTTKGRRVLKIDDDSLTLRSCHSPLRELETLHDHLLEQLSQSD 405 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 L P+DI+VM+ D+ +Y+P+I AVF S D ++PYAI+DR A Q P++ +F+ LL L Sbjct: 406 GLAPKDIVVMMPDVAAYAPYIDAVFASKRGDHFIPYAIADRGAAQESPLINSFLHLLGLN 465 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 SRF D+L +L+VP + RFD+ ++ L +R+W+ ++G+RWG D + + +LPA Sbjct: 466 KSRFALTDILGILEVPAVMRRFDLDDDDLLLIRRWLEQAGVRWGRDQHSRQAQQLPAFEH 525 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 ++W FG+ R++LGY+ + L G A+ +G L + + ++ + L + Sbjct: 526 NSWAFGIKRLILGYSFSDEAPIYHDSLALPGVEGQSAQALGKLLNFIEAIDEFNLALGEH 585 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 PL + + ++ F+ E + + Q + E QY + L ++++ Sbjct: 586 CPLSVRITQLQTLVETFYDCVDEELSQKQELLQAITRLSEELTATQYQSELELEVMQNWF 645 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK- 700 + L + R+ QR+LAG VN CTLMPMRSIPF +VCLLGMNDGVYPR P+GFDL++Q+ Sbjct: 646 TRHLTESRVGQRYLAGSVNFCTLMPMRSIPFMLVCLLGMNDGVYPRVQHPVGFDLVAQEG 705 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG---- 756 P++GDRSRR DDRYLFLEAL+SA+++LYISYIG S +DNSER PS+LV ELI+Y Sbjct: 706 PRKGDRSRRLDDRYLFLEALLSAREQLYISYIGHSERDNSERIPSMLVSELIEYCQLCYL 765 Query: 757 --------QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE---------- 798 + + + E + L PFD + Y E Sbjct: 766 PENCAHLLKGSNADDTSTADIAKIELAILDQLIITMPLQPFDERLYLADESEGAECEGAK 825 Query: 799 ------RQSYAREWLPAASQAGKAHSEFVQPLPFTLP-----------------ETVPLE 835 RQSY+ +W P A + Q E + L Sbjct: 826 SEPRRLRQSYSEQWCPRALTEQDKQHDGEQGAKPASAGHFIEAPLSLVADEDKGEPLELS 885 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV---EQD 892 L RF+ +P + FF L+++ + EPF L LSRYQ+ L+ V ++ Sbjct: 886 ALIRFYRNPAQYFFNRTLKLDLNLSIQADENDEPFALNPLSRYQLQSTLIEDAVKSGDER 945 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP-GQSMEIDL---ACN 948 + L R R +G LP F ++ + +++ L R + + + +IDL Sbjct: 946 PSSELLERLRLSGQLPLAPFDDLLLKQYQHDIRALVGRTLYLQGESSHTQDIDLLLSDSA 1005 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCAS-----------GGNGESR 997 + G + V GL+ +RP + ++++L HL AS + Sbjct: 1006 ATALVGRIDGVSAKGLVNYRPGTANARDLIRVYLRHLCLNASVSDNSDVERHEATPWQRH 1065 Query: 998 LFLRKDGEWR-FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDA 1056 +L G + F P+ EQAL+ LS E Y +G S PL +P + A+++ Sbjct: 1066 SYLLDIGHFHAFAPITPEQALNQLSLWAEHYHQGQSQPLPFMPRTAFAYVEA-------- 1117 Query: 1057 MLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPL 1116 + + + GEG + YQRL+ + + L P+ Sbjct: 1118 ----EGEHIEKLIAAQPQWLDEQSNLGEGQEAHYQRLFTFPDDFSEAGFGTIASTLLSPM 1173 Query: 1117 FR 1118 Sbjct: 1174 LS 1175 >UniRef50_Q3IJ13 Exonuclease V, gamma chain with recB and recD: 5' and 3' nuclease, ATPase, recombinase, helicase n=3 Tax=Alteromonadales RepID=Q3IJ13_PSEHT Length = 1099 Score = 957 bits (2474), Expect = 0.0, Method: Composition-based stats. Identities = 391/1134 (34%), Positives = 605/1134 (53%), Gaps = 55/1134 (4%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML + SNR++ L+A +++ L PF+ E++LVQS GM+QWL++ LS+ G+AA + Sbjct: 1 MLNIIQSNRMEALQAQFHQLLKTNPLASPFDKEVVLVQSPGMSQWLKIGLSENLGVAAQV 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DFPLP+SFIW ++ ++LP +PKESAFNK +++WKL +LP ++ + L+ YL D D Sbjct: 61 DFPLPSSFIWQLYQQLLPNVPKESAFNKPNLAWKLFAILPSCIDEPLYLPLKTYLEGDID 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETG--HLVEGLGEAQAWQAPLWKALVEYTHQ 178 +K F L K AD++DQYL+YRP W+A W++G L + WQ LW+ +V+ + + Sbjct: 121 GQKTFALCEKIADVYDQYLMYRPHWIATWDSGIDELDDVDVTIAPWQPDLWRRIVQLSLE 180 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 LGQ ++HRAN+ + + LE+ LP R+ + GISA+ L+ AL + E+ L Sbjct: 181 LGQSQFHRANMQGQLLAALETMDNSL--LPQRISLFGISAIASSQLEVFTALSEKTEVFL 238 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 F NP +YWGDI D AK+ + + +++ Q + +GNP Sbjct: 239 FFFNPSEHYWGDIIDEKTAAKISAKYAKMP--------LVEAQQKKQTNPDEEYYFIGNP 290 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV-AGVNIEE 357 LL+SWGKLGRDY L L+ ++ +D F+DV D LL IQS+I +L + N E Sbjct: 291 LLSSWGKLGRDYFEQLVQLD-ARWIDGFIDVFDDTLLGQIQSEIYQLAFKGESLTDNKEW 349 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 F + K P+ D+SIT CH+P REVE LHD LL + ++P LTP+DIIVM+ D+ + Sbjct: 350 FINDEGKLPISATDTSITLSDCHTPLREVERLHDYLLNLFNQNPALTPKDIIVMMPDVGT 409 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 YSP+I+AVFG A R++PYA++D Q +PVL +F SL +LP SRF D+L LL V Sbjct: 410 YSPYIEAVFGGAQGSRFIPYALADLAIEQENPVLSSFASLANLPFSRFGVSDILDLLQVT 469 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 +A +F + ++ W+ G++WGI+ D+ +LPA +TW+ GL R+LLG AM Sbjct: 470 QIAEKFGLEAHEYEQIQYWLERVGVKWGINADHKSSFDLPAIDLNTWQHGLNRLLLGIAM 529 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 Q + + DE G+ + + L + L ++ L + L V ++L+A Sbjct: 530 RDEQCPFNGIYSADEVEGMALDTLNKLVHFIDVLQSFKEQLTPDDTLTNKAHVLSELLSA 589 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 + +++ + +++ + + Y AV ++ + Q + ++ + QRFL G Sbjct: 590 IYESESDDSWDLLVLQNVLEELQKHHNNGDYSKAVSQRIVSYLIKQGIQEKGVGQRFLVG 649 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS-QKPKRGDRSRRDDDRYLF 716 VN CTLMPMR++PFKVVC+LG+ND YPR + P+GFDL+ K ++GDRSR+ DDRYLF Sbjct: 650 QVNFCTLMPMRAVPFKVVCMLGLNDADYPRNVQPIGFDLVPYSKKQKGDRSRKLDDRYLF 709 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 LEAL+SA+ LY+SYIGRS DN R PS LV EL++YIG+S L D+SE + Sbjct: 710 LEALLSARDNLYMSYIGRSCFDNQPRMPSTLVSELLEYIGRSFAL-------SDDSEKTL 762 Query: 777 KAHLTCLHTRMPFDPQNYQPGER-------QSYAREWLPAASQAGKAHSEFVQPLPFTLP 829 L PF+ Y E+ SY WLP+ + V L T P Sbjct: 763 PECLISQQHLQPFNSHYYLANEQANTVLSNHSYNPIWLPS----ESITPQVVSALNATPP 818 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV 889 E + L+ R + +F+Q L + + + D EPF L+ L RY ++L A + Sbjct: 819 EQLELDVFIRSVCNAQESFYQQSLGLRLPQFNEVVKDEEPFSLDALRRYFYLDEILEANI 878 Query: 890 EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC--RQPGQSMEIDLAC 947 + + G+LP G + +E+ + LA +V +E+ L Sbjct: 879 NELPLST--EQILQRGELPQANVGSLIFESMQHRVDALAGQVKEQIKGGKSDPIEVALEL 936 Query: 948 NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWR 1007 +I GWL + + +R + + ++ ++ HLV + E+ L L D + Sbjct: 937 ENTKIEGWLNHIYLQKQVFYRSASIKAKDLIKGFIYHLVAQSMEQQVET-LILGLDKQVT 995 Query: 1008 FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKA 1067 F P++ A L E Y+ + P+ P SG ++K+ D + KA Sbjct: 996 FAPISKTDADALLVDWFELYKALRNEPVAFFPVSGYEYVKSGGD------------IAKA 1043 Query: 1068 RTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 +KF Y G RGEG++ + + + L + ++ S + L PLF + Sbjct: 1044 MSKFSPQYIG----RGEGENPYIRLTVQSLND-CQDEFIQWSDKLLAPLFAHAK 1092 >UniRef50_B8E565 Exodeoxyribonuclease V, gamma subunit n=8 Tax=Shewanella RepID=B8E565_SHEB2 Length = 1274 Score = 957 bits (2473), Expect = 0.0, Method: Composition-based stats. Identities = 407/1254 (32%), Positives = 633/1254 (50%), Gaps = 165/1254 (13%) Query: 1 MLRVYHSNRLDVL-EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML++ SN+++VL L ++ + E ILVQS GM+ WL++ ++++ GIAA Sbjct: 1 MLKLIQSNQMEVLCAHLAAYLTQPLAFARLLSNEHILVQSPGMSTWLRLEIAKQNGIAAA 60 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD- 118 ++FPLP+SF W + +LP++PK++AF K +M+WKLM LLP++L+ + F LRHYL + Sbjct: 61 LEFPLPSSFTWQLCHDLLPDVPKDNAFTKAAMTWKLMQLLPRMLQDDAFGPLRHYLGNTL 120 Query: 119 ---------------------SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGH---- 153 +D KL+QL + AD+FDQYLVYRPDW+ WE Sbjct: 121 DNRSTTNSADTSEHLNTSDMTADDIKLYQLCGRIADIFDQYLVYRPDWILAWEQNEHPES 180 Query: 154 LVEGLGEAQAWQAPLWKALVEYTH-QLGQPRWHRANLYQRFIETLESATTCPPGLPSRVF 212 L + L E Q WQ LW+AL+ + +L Q +HRANL+ I L + T LP R+F Sbjct: 181 LTKPLNEDQRWQPILWRALIAFNRDELNQSHYHRANLHSDLIAALNNPDTSLAQLPQRLF 240 Query: 213 ICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDR 272 + GIS++ P L+ L L I++ +L +PC++YWGDI DP A++ + Sbjct: 241 VFGISSMAPQTLEVLYHLAGRIDVIVLGLSPCQHYWGDIVDPRNRARMAVQYAGKRQLAE 300 Query: 273 ELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ---ELDAFVDV 329 + + +VGNPLLA+ GK+GR+ + +L +L + D + + Sbjct: 301 ---------------LWEDKLEVGNPLLANNGKMGRELLDMLLELPAEHCDFGDDVYCEP 345 Query: 330 TPD--------NLLHNIQSDILELENR-AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCH 380 D ++LH +Q DILE++ V G + E + +N+R L D SI CH Sbjct: 346 CDDPNDPHSHASMLHGVQYDILEMQTLDRVLGPDAELYQNVENRRLLKRDDQSIRVKSCH 405 Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 SP REVE LHD LL +L LTP+DI+VM+ D+ +Y+P+I AVF + Y+PYAI+ Sbjct: 406 SPLREVETLHDHLLELLSNHADLTPKDIVVMMPDVAAYAPYIDAVFSAKQGLHYIPYAIA 465 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 DR A Q P++ +F++LL + SRF D+L++L+VP + RF + ++ L+ +R+W++E+ Sbjct: 466 DRGAAQESPLINSFLNLLGINQSRFGLTDILSILEVPAILRRFQLDDDELQLIRRWLDEA 525 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 G+RWG D+ + + +PA Q++W FG+ R++LGYA+ +Q L G A+ Sbjct: 526 GVRWGRDEQSRLKQGVPAFEQNSWAFGIKRLILGYALSDDAPLYQDHLIVTGIEGQSAQA 585 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 +G L + + L+ + LA + L ++L+AF+ D + + I A+ Sbjct: 586 LGKLLNFIEVLDETAQILALPQVGALRLAELTELLDAFYDTDEDEREQLQEIRDAIAALE 645 Query: 621 AEGLGAQ-------------------------YGDAVPLSLLRDELAQRLDQERISQRFL 655 E L A G ++ + +L+ QRL + R+ QR+L Sbjct: 646 QELLSAGKPLDTSPLAFSLDISPLAPLAQQSISGLSLSIEVLQQWFNQRLTESRVGQRYL 705 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP-KRGDRSRRDDDRY 714 AG VN CTLMPMRSIPFKVVCLLGMNDGVYPR P+GFDLM+ ++GDRSRR DDRY Sbjct: 706 AGSVNFCTLMPMRSIPFKVVCLLGMNDGVYPRVQHPVGFDLMAHFGARKGDRSRRLDDRY 765 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL--------PGDEA 766 LFLEAL+SA+++LYISYIGRS +DNSER S+LV ELI+Y + Sbjct: 766 LFLEALLSAREQLYISYIGRSERDNSERIASMLVSELIEYCQLCYLPETLLAQSQKASSP 825 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPGER----------------------QSYAR 804 ++ +++E + + PFDP+ YQ + QSY++ Sbjct: 826 IDPEDAEKALYNAIVSHQPLQPFDPKLYQAAVKSDDENSSNIDGSSISQHKSGIGQSYSQ 885 Query: 805 EWLPAASQAGKAH--------------SEFVQPLPFTLPET-----------VPLETLQR 839 +W P + A H ++ +P T + V + L R Sbjct: 886 QWCPPNADAAGTHAGRFIGAQTRIMLEADEQDSMPDTEAQPASVREQQQSKQVDVSALIR 945 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE---R 896 F+ +P + FF L+V+ + EPF L L RY + QLL+ + Q E Sbjct: 946 FFRNPAQYFFNRTLKVDLSLNIQADDNDEPFSLNALERYMLQAQLLDDAIGQGLTEPDIE 1005 Query: 897 LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC--------- 947 L +R +A+G LP F ++ +++ L R + + S D+ Sbjct: 1006 LIKRLKASGSLPMQPFDDLLLRQYQHDIKPLIGRTLFLKGEQTSSHADIKLVFDLPITAG 1065 Query: 948 --NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGE 1005 V + G + + P GL+ +RP ++L+L HL A G S L G Sbjct: 1066 KSQQVLLQGRIDDISPKGLVNYRPGSAHGRDVLRLYLRHLCLMAMGHTHASYLL--DMGH 1123 Query: 1006 WR-FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTL 1064 + P+ AE+A L+ L+ + +G PL +P + A++ + D L Sbjct: 1124 FHAIAPITAERAHALLADLLVLFYQGQQYPLCFMPRTSLAYV--------SCEGEHDERL 1175 Query: 1065 QKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 Q+A ++L GEG++ YQRL+ + ++ ++R P+ Sbjct: 1176 QQALPEWLDE----QSQLGEGNEPHYQRLFSFPRDFSEDSFGALAERIYRPMVS 1225 >UniRef50_Q080D9 Exodeoxyribonuclease V, gamma subunit n=6 Tax=Shewanella RepID=Q080D9_SHEFN Length = 1270 Score = 954 bits (2467), Expect = 0.0, Method: Composition-based stats. Identities = 395/1262 (31%), Positives = 620/1262 (49%), Gaps = 171/1262 (13%) Query: 1 MLRVYHSNRLDVLEALMEFIVE-RERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML + SN+++VL + ++ R E +LVQS GM+ WL++ +++ GIAA Sbjct: 1 MLTLIQSNQMEVLSEQLAKLLAIRLDNVSLLASEHVLVQSPGMSTWLRLEIAKHNGIAAA 60 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 + FPLP+SF W + +LP++PK++AF K +M+WKLM LLP LL+ DF+ L+ YL+ Sbjct: 61 LSFPLPSSFTWQLCHDLLPDVPKDNAFTKAAMTWKLMDLLPSLLDNPDFSPLKQYLSPQV 120 Query: 120 DK---------------------------------------------RKLFQLSSKAADL 134 D KLFQL + AD+ Sbjct: 121 DTTTDIAATDILDTDVDANTNTDIETETNIHTANSHAISQLNQSHDAIKLFQLCGRIADI 180 Query: 135 FDQYLVYRPDWLAQWETGHLVE------GLGEAQAWQAPLWKALVEYT-HQLGQPRWHRA 187 FDQYLVYRP+W+ WE + L E Q WQ LW+ L++Y H L +HRA Sbjct: 181 FDQYLVYRPEWILAWEQNQPLSSIDNRLALDENQQWQPILWRTLIDYNQHHLHASHYHRA 240 Query: 188 NLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYY 247 NL+ I TL + T LP+R+++ GIS++PP L L L I++ +L +PC++Y Sbjct: 241 NLHADLIATLANPDTDLSMLPARLYVFGISSMPPQTLDVLYHLASRIDLIMLSLSPCQHY 300 Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG 307 WGDI +P A++ + D+ + + + +VGNP+LA+ G++G Sbjct: 301 WGDIIEPKTRARMALQYANKKQLDQ---------------DWEDKLEVGNPILANNGQMG 345 Query: 308 RDYIYLLSDLESSQEL---DAFVDVTPDNLLHNIQSDILELENR-AVAGVNIEEFSRSDN 363 R+ + LL L D +V+ P+NLLH +Q DIL++E G N + Sbjct: 346 RELLDLLLSLPPEHTDFGYDCYVEPEPNNLLHGVQYDILQMETLGQPLGPNSSVYQDIHA 405 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 +R L P D SIT CHS REVE LHD LL +L + L+P+DI++M+ D+ +Y+P+I Sbjct: 406 RRTLLPSDDSITLRSCHSALREVETLHDHLLELLSNNSDLSPKDIVIMMPDVAAYAPYID 465 Query: 424 AVFGSAP-----------ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 AVFG+A D Y+PYAI+DR A Q P++ +F+SLL++ SRF D++ Sbjct: 466 AVFGTANSQYFADKNPQKGDYYIPYAIADRGAAQESPLINSFLSLLNINQSRFGLTDIIG 525 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 +L+VP + RF + ++ L +R+W++++ +RWG + +L + Q++W FG+ R++ Sbjct: 526 ILEVPAILRRFQLDDDELSLIRRWLDDANVRWGRSEQTRSQLGVQPFTQNSWAFGIKRLI 585 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 LGYA ++ L G ++ +G L + L ++ + A + E L + Sbjct: 586 LGYAFNDDADIYRETLMVQGIEGQSSQALGKLLNFLETIDTYFNLFANDYSTAERLEQLQ 645 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 +L + + + I + E A + V + +L+ QRL + R+ Q Sbjct: 646 QLLADCYDTTDDEREQIQAIRDALVTLDTELESAGHQGQVDIEVLKQWFNQRLTESRVGQ 705 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ-KPKRGDRSRRDD 711 R+LAG VN CTLMPMRSIPFKVVCLLGMNDGVYPR P+GFDLM+ PK+GDRSRR D Sbjct: 706 RYLAGSVNFCTLMPMRSIPFKVVCLLGMNDGVYPRVQHPVGFDLMAHFGPKKGDRSRRLD 765 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD------- 764 DRYLFLEAL+SA+++LYISYIG S +DN+ER S+LV EL++Y S+ Sbjct: 766 DRYLFLEALLSAREQLYISYIGHSERDNAERIASMLVSELVEYCQLSYLPQSLQQQLEQQ 825 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER---------QSYAREWLPA-ASQAG 814 +N D+++ V A L PFD + ++ S+ +W P A+ Sbjct: 826 AEINLDDADKAVLAQLIQAQPLQPFDAKLFRETPLSAHSVNKLQHSFNAQWCPPPANATI 885 Query: 815 KAHSEFVQPLPFTLPE------------------TVPLETLQRFWAHPVRAFFQMRLQVN 856 H F Q LP + + + L L RF+ +P + FF L+V+ Sbjct: 886 NNHIFFEQALPLSAEQADEVFAHTHINSEGIKVVELELSALIRFYRNPAQFFFNRSLKVD 945 Query: 857 FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE---QDDAERLFRRFRAAGDLPYGAFG 913 + + EPF L L RY + ++L+ +E L + + +G+LP F Sbjct: 946 LSLDIQADDNDEPFSLNALERYLLQSRMLDNAIEHQLDSPDFELLSKLKTSGELPMAPFD 1005 Query: 914 EIFWETQCQEMQQLADRVIACR--QPGQSMEIDLACN----------------------- 948 ++ +++ L +RV + Q ++ +DL + Sbjct: 1006 DLLINQYLRDISPLINRVQFLQDQQAMHTLNVDLNFDLPMQDFPAYALSVQGLPEQADTT 1065 Query: 949 -----GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL----- 998 V + G + + P GL+ +RP ++++L HL A + S + Sbjct: 1066 HSSIVRVNLVGRIDDILPKGLVNYRPGTAHGRDFIRVYLRHLCINAMANSSTSGMGKNQF 1125 Query: 999 -FLRKDGEWR-FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDA 1056 +L G + F P+ AEQA L + I G+ +G + PL +P++ A+++T Sbjct: 1126 SYLLDIGHFHAFAPITAEQAQAQLMRFISGFIQGQTQPLCFMPKTAFAYVET-------- 1177 Query: 1057 MLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPL 1116 D ++ K Q ++ GEG D QRL+ + + L P+ Sbjct: 1178 ----DGDHEEKLLKAQQKWDDGQNQFGEGHDPHNQRLFHFPEDFSEARFGALAIHLLQPM 1233 Query: 1117 FR 1118 Sbjct: 1234 LS 1235 >UniRef50_Q3ASJ4 DNA helicase/exodeoxyribonuclease V, gamma subunit n=8 Tax=Chlorobiaceae RepID=Q3ASJ4_CHLCH Length = 1127 Score = 950 bits (2456), Expect = 0.0, Method: Composition-based stats. Identities = 388/1141 (34%), Positives = 582/1141 (51%), Gaps = 82/1141 (7%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L +Y SNR+++L + +V + L FE E+I+VQS GM +WL M L+ +FG+ AN Sbjct: 33 LHLYTSNRMEMLVDSLAEVVRQ-PLASVFEHEVIVVQSRGMQRWLSMELAGRFGVWANGR 91 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 +P P + + ++F ++LP + + AF K+ MSW++M LLP LLE +F LR Y DDSD Sbjct: 92 YPFPNAMVQELFKQLLPSVAQSDAFKKEVMSWRVMRLLPHLLEMAEFLPLRRYAADDSDG 151 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 KLFQLS K AD FDQY ++RPD LA WE +AWQ LW+ALVE Sbjct: 152 LKLFQLSEKIADTFDQYTLFRPDMLALWE--AGGGVAEGGEAWQPLLWRALVEGAG---- 205 Query: 182 PRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 HR L + L +++ LP R+ + GIS LP +L+ A+ + E+HL Sbjct: 206 --LHRGQLRELLFRQLSRSSSKISELPERITLFGISYLPQFHLELFAAVARLTEVHLFLL 263 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA 301 +P + YWGDI +A+L + GNPLLA Sbjct: 264 SPTQEYWGDIVSRKAMARLS-------------------------EAEQALRSEGNPLLA 298 Query: 302 SWGKLGRDYIYLLSDLESS--QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 S G++GRD+ ++ ++ + + D D+LLH +Q DIL L+ Sbjct: 299 SLGRIGRDFSEMVLEMSDEALDSQEFYDDPPEDSLLHALQWDILHLQGAGEMD------- 351 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 + R L P D S+ H CH+P REVEVL+D +L +LE P ++ RDIIVM DI+SYS Sbjct: 352 --ETPRLLQPHDRSVQIHACHTPLREVEVLYDAILGLLEAHPHISLRDIIVMTPDIESYS 409 Query: 420 PFIQAVFGSAPADRY-------LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 P+I VFG+A LP++I+DRR + A + LL+L SR + + Sbjct: 410 PYIATVFGTAREAGKEGKGVVALPFSIADRRMMHEGEIASALLKLLALHGSRLTASMLFD 469 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 L P ++ F E LR +R W+ SGIRWG+D+++ RE LPA H+WR GL R+L Sbjct: 470 FLASPPVSRAFGFDAEALRLIRGWIEGSGIRWGMDEEDRRERNLPAYRDHSWRAGLERLL 529 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 LGYAM + +Q VLPY + +G AE++G A + L + R LE W Sbjct: 530 LGYAMPEEEQLFQGVLPYGDIAGSAAEMLGRFAEAVEALERFVSSSEPSRTLEAWRQQYA 589 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 L FF PD ++E + + + G+ A + + + + L RL+++ Sbjct: 590 MWLTTFFAPDEDSEREFATLATLGEELAEYGINAGFEENISPLVFFTWLRSRLEEQEQGL 649 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 F+ G + C ++PMRSIPF+VV L+GMNDG +PRQ FDL++++P++GDRS R++D Sbjct: 650 GFMTGGITFCAMLPMRSIPFRVVMLIGMNDGAFPRQSRAPSFDLITRQPQKGDRSLRNED 709 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 RYLFLE+++SA++ LYISY+G+SI+DNSE PSVLV EL+D + ++ LP + + Sbjct: 710 RYLFLESILSARELLYISYVGQSIRDNSEIPPSVLVSELLDAVRRAFVLPNESS------ 763 Query: 773 EARVKAHLTCLHTRMPFDPQNY-QPGERQSYAREWLPA-------ASQAGKAHSEFVQPL 824 ++ HL H PF + + SY+ E A S L Sbjct: 764 ---IEQHLVVRHRLQPFHHDYFSEHSPLASYSSENYYALIASEQSLQAVPPIRSFISTAL 820 Query: 825 PFTLPE--TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 E TV LE L F+ +P F + RL + + D+EPF +E L RY++ Q Sbjct: 821 SEPTAEWRTVQLEQLLHFYDNPSAFFLEQRLGIKPEGLLLPLQDSEPFAVESLERYRLQQ 880 Query: 883 QLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP---GQ 939 +LL A + AE L F++ G LP GE+ + T QE+ A + Sbjct: 881 ELLEAQLRGQPAEALLPLFKSRGMLPPAQHGELLFATVMQEVDDFAATLRQHLAGEVALA 940 Query: 940 SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASG--GNGESR 997 +E+D+ +I G L + + +LR+RP+ + V + W+EHL+ CA G + Sbjct: 941 PLEVDIEVGEFRIVGRLDGIWANAMLRYRPARMKVRDRFRWWIEHLLLCALQPTGYPLTT 1000 Query: 998 LFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAM 1057 L DGEW +PP+ + +L+ L++ Y +G+ PL P S A++ DA + Sbjct: 1001 HMLMSDGEWSYPPI--DNPHQHLTTLLQRYWQGLCEPLPFFPRSAYAFVLKGMDA--NHH 1056 Query: 1058 LDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLF 1117 LD + A ++ N +GEG D QR + + +E + P+ Sbjct: 1057 LDVGKGIDAAYREWRDDTFTN--RKGEGSDSAIQRCFGAAANPFSDTFIELALELFTPMM 1114 Query: 1118 R 1118 Sbjct: 1115 E 1115 >UniRef50_A8ZX08 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZX08_DESOH Length = 1085 Score = 949 bits (2452), Expect = 0.0, Method: Composition-based stats. Identities = 358/1131 (31%), Positives = 545/1131 (48%), Gaps = 73/1131 (6%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 + + SNR+++L + LD+PF E I+VQS GM +WL M +++ GI A+ Sbjct: 1 MYFFTSNRMEMLSRAFCEALTAYPLDNPFARETIVVQSMGMKRWLSMEMARHTGICAHNR 60 Query: 62 FPLPASFIWDMFVRVLPEIPKESA-FNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 F P +F+ M + S ++M+W + +L + + L+ YL D D Sbjct: 61 FLFPNAFLNQMLQTAFADAVPVSPDVGVEAMTWAVFPVLADVFAHPALSPLQAYLQ-DGD 119 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 K +QL+++ AD FDQYLV+RPD L QWE G L + WQA LW+ L+ Sbjct: 120 VIKRYQLAARIADTFDQYLVFRPDMLLQWEAGAL--PADPHEKWQAHLWRLLISQGW--- 174 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 RA +++F+ +S LPSRV + GIS LP ++Q AL +E+ Sbjct: 175 --AEQRAERWKQFLSLAQSGALAGSTLPSRVSVFGISTLPRFHVQVFAALSAFLEVRFFV 232 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NPCR+YWGDI E +A + + + GN LL Sbjct: 233 LNPCRHYWGDILS-----------------TYEKKQVETGADARDIPEAARHLETGNSLL 275 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 AS G + RD+ ++ D QE F +L +Q+DIL+L++ A Sbjct: 276 ASMGMVARDFFAMVED-HPHQETSLFAPAGETTMLACLQNDILDLKDAADQ--------- 325 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + +D D+S+ VCHSP REVE LHD LLAM E D L+P D++VM +++ Y+P Sbjct: 326 --ERVRVDGNDASMQISVCHSPMREVEALHDNLLAMFEADAGLSPEDVLVMAPNMEVYAP 383 Query: 421 FIQAVF--GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 +++AVF G+ + +PY ++DRR++ PV+ F+ L+ L +SRF VL +L+ Sbjct: 384 YVEAVFDAGADDGGQRVPYTVTDRRSKSGSPVVRTFLGLMDLWESRFGISAVLEILESAF 443 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM- 537 + RFDI E + QW+ ++G+RWG+D + +LP ++TW+ G+ ++LG AM Sbjct: 444 VRERFDIGEAEFFRISQWLVDAGVRWGLDGAFKTDRDLPEFSENTWKQGIDSLVLGCAMA 503 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + + +LPYD G + + + L + R W + ++ + Sbjct: 504 GKGEILFDGLLPYDHMEGSDVDSLEKFLAFWHVLLRFYRQCGGAHAPGRWRQILTALVES 563 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 F D EA + +I A+ A + V L ++R+ L +R + + F++G Sbjct: 564 MFAADPAVEADLQVITDALNALGESAAHAGFDGPVDLPVIREFLNRRFEGQAYGAPFISG 623 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V C+++PMRSIPF V+CLLGMN YPRQ GFD++ + P+ GDRS+R+DDRYLFL Sbjct: 624 GVTFCSMLPMRSIPFAVICLLGMNVDDYPRQTFSPGFDMIRKHPRPGDRSKRNDDRYLFL 683 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 E L+SA+++LYISY+G ++DNS+R PSVLV EL DY+ + V Sbjct: 684 ETLLSARRRLYISYVGHDMRDNSDRPPSVLVGELCDYLRERFDAG---------PLTDVV 734 Query: 778 AHLTCLHTRMPFDPQNYQPG--ERQSYAREWLPAASQAGKAHSEFVQPLPFTL------- 828 +T H PF P + R SYA ++L AA Q L + Sbjct: 735 EKITTHHRLQPFHPDYFSSDTQARFSYAADYLAAARQLAGGRPGRPAALEPAVPVPDNAD 794 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 P+T+ +E L RF+AHP R F RL + D + EPF + GL RY + ++L+ L Sbjct: 795 PQTIEVEDLCRFFAHPARYFLTQRLGLRVAETDRIPEEAEPFEVAGLERYDMARRLVERL 854 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD--RVIACRQPGQSMEIDLA 946 + +D A L RA+G LP+G G+ +E R + EI L Sbjct: 855 LAEDPAAPLENALRASGILPHGEPGKRLFERLKTGAAGFVAGVRAVTANGGLDRREIRLD 914 Query: 947 CNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEW 1006 NG + G L + R+R + + W+ HL + G S F +DG W Sbjct: 915 INGTTLCGTLDGIGEQEWFRFRYATARPGDFITNWIAHLAWSVDQGRAGSGRFAARDGWW 974 Query: 1007 RFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQK 1066 F P+ + L L+ LIE YR+G PL P S + +T N +M Sbjct: 975 AFDPV--DNGLSILAALIEIYRQGRLRPLHFFPRSAFVYAETLQKKGNASM--------- 1023 Query: 1067 ARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLF 1117 A + LQA+ GN V GE +D +Y + + S + PL Sbjct: 1024 ALDRALQAWRGNERVAGEKEDPFYALWFAG-DDPLDDEFETLSTAVVTPLL 1073 >UniRef50_Q65UM5 RecC protein n=9 Tax=Gammaproteobacteria RepID=Q65UM5_MANSM Length = 1167 Score = 946 bits (2444), Expect = 0.0, Method: Composition-based stats. Identities = 433/1173 (36%), Positives = 651/1173 (55%), Gaps = 92/1173 (7%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 VYHSNRLDV + ++ +++ DDPF+ E+ILVQS GMAQWLQ+ +++K GIAAN+ Sbjct: 22 FTVYHSNRLDVQKDILIELMQLLPPDDPFQTEIILVQSPGMAQWLQLKIAEKKGIAANLK 81 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD--S 119 FP+PASFIW ++ VL ++ +++ FNK +M+W+LM L+PQ L F L +YL + S Sbjct: 82 FPMPASFIWQQYINVLEDVSQQTQFNKDAMTWRLMQLIPQFLSEPCFQALENYLKNSPYS 141 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL------------------VEGLGEA 161 +++KL+QL+ K ADLFDQYLVYRP+W+ WE + + Sbjct: 142 EQQKLYQLARKVADLFDQYLVYRPNWIHAWENNQPESIEQAIGTYQKDDNPELITQIKRD 201 Query: 162 QAWQAPLWKALVEYT-HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 WQ LW+AL++ G HRANL+Q FI+ L SA P LP R+FI GISALP Sbjct: 202 IKWQGILWRALIDEVQRGAGYKVRHRANLHQAFIDKLRSAK--PENLPQRIFIFGISALP 259 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 YL+ +A+ ++ +IHL F NP R YWGDI D +L KL TRQR +E+ L + Sbjct: 260 QSYLETFEAMSRYCDIHLFFNNPSREYWGDIVDDRFLQKLQTRQRFDHYENNHTALLSSA 319 Query: 281 ------ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL-----ESSQELDAFVDV 329 + + + + VGNPLLA WGKLGRD+ YLL+DL E ++E+ AFVD+ Sbjct: 320 TLTNMQQENYEFSPDNEKLLVGNPLLAGWGKLGRDFFYLLTDLMTRAEEHNREIIAFVDL 379 Query: 330 TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVL 389 LL +Q IL+L AV +N + D+S+T H CHS REVEVL Sbjct: 380 DDKTLLSQVQGHILDLIPMAVKKLNKPQ------------EDNSLTIHACHSVMREVEVL 427 Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP-----------ADRYLPYA 438 HD LL++ E D LTP+DI+VMVADID Y+P+IQAVFG RY+P++ Sbjct: 428 HDYLLSLFELDKNLTPKDIVVMVADIDKYAPYIQAVFGQYQKDLQTNQFYQADKRYIPFS 487 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 ISD + +S ++ +F+ LL+L +S+F +E+VLA LD+P + RF I E L +R+WV Sbjct: 488 ISDNKLTESDVLIASFLMLLNLKESQFSAEEVLAYLDIPAIRMRFQIELEDLETIREWVK 547 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 SGIR+G++ L+ + W+ GL RMLLGYAM + G WQ L +D+S GL Sbjct: 548 NSGIRFGLEKRTDNSLK----NYNAWQSGLERMLLGYAMRAENGIWQDSLGFDDSHGLQG 603 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 +L G LA+ + +L W++ L EEW ++++ FFL + ++ A+ +++ Q Sbjct: 604 KLAGLLAAFIERLYQWQQFLRNPHSYEEWGQALLELVDHFFLENEQSLEAILYLKEIIQQ 663 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + + + + + ++ + +A++L+ + S +FL G V+ CTL+PMR+IPFK VCLL Sbjct: 664 LHEQLDEVNFTSKLEIDVIAEVMAEQLNDKNTSLKFLVGKVSFCTLLPMRAIPFKAVCLL 723 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 GMNDG YPRQ P FDLM ++GDR RRDDDRYLFLEAL++A+ Y+SY+G+SI D Sbjct: 724 GMNDGEYPRQQTPNSFDLMQYHRQKGDRFRRDDDRYLFLEALLAAENYFYVSYVGQSIID 783 Query: 739 NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE 798 N +R PSVLV +L+DY+ ++ N DE +++ L H+ F P N+ Sbjct: 784 NQQREPSVLVSQLLDYLAENLA-------NNDEEIEQIRTSLVQYHSMTIFSPDNFSAMH 836 Query: 799 RQSYAREWLPAASQAGKAHSEFVQPLPFTLPE--TVPLETLQRFWAHPVRAFFQMRLQVN 856 R SYA+EWLP ++ +F Q + + E + + L +F HPV+ FF+ RL V Sbjct: 837 R-SYAKEWLPLVNRNQYPVPDFTQQISGEIDEVREIDILQLVQFVQHPVKFFFEKRLGVY 895 Query: 857 FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 F+ D +IP+TE F L+ L + I +L+ D+ + F R + G LPYG FG+I+ Sbjct: 896 FQQTDEQIPETENFTLDNLDNFLIKDELI--RFADDETDNYFERLKLEGILPYGHFGDIY 953 Query: 917 WETQCQEMQQLADRVIACR---QPGQSMEIDLACNG--VQITGWLPQVQP--DGLLRWRP 969 E +L +++ A Q +EI L V +TG L + ++WR Sbjct: 954 KRRLQNEAAELKNKISAYLSQEPAHQFVEITLDMGEQSVLLTGHLDHLYQPFAQRVKWRV 1013 Query: 970 SLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYRE 1029 + ++ WL +L+ + N L+ K+G F L AL L ++ Y + Sbjct: 1014 GEVKDKHIIENWLYYLLQLCTTDNVNPPLYYGKNGCIGFKTLEKSTALSILKLYVKAYLQ 1073 Query: 1030 GMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIW 1089 G+ +V +LK+C + + A ++ + E +DI+ Sbjct: 1074 GLKQVQIVPTYKIDDYLKSC-------QPETEFDTLSAFNNLRDLFKSSNNYTNEKEDIY 1126 Query: 1090 YQRLWRQLTPETMEA-----IVEQSQRFLLPLF 1117 + R+++Q T + I + ++ + + Sbjct: 1127 WTRVFQQATELNSDKEKLMQIQQTTRDWFGLML 1159 >UniRef50_A1S6U9 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Shewanella amazonensis SB2B RepID=A1S6U9_SHEAM Length = 1163 Score = 944 bits (2440), Expect = 0.0, Method: Composition-based stats. Identities = 409/1152 (35%), Positives = 612/1152 (53%), Gaps = 74/1152 (6%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M + SN ++ L + + + + E ILVQS GMA WL++ ++ GIAA + Sbjct: 1 MFTLVQSNHMERLAKRLADELNQAS-GNVLATEQILVQSPGMATWLRLEIAAHNGIAAAL 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FPLP++FIW + +LP +PKE+AF K +M+WKLM LLP+L+E+ F LR YL+ DS Sbjct: 60 SFPLPSNFIWSLCYALLPGVPKENAFTKDAMTWKLMALLPRLIEKPHFEPLRDYLSSDS- 118 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV-----------EGLGEAQAWQAPLW 169 KLFQL+S+ AD+FDQYLVYRPDW+ WE G L + WQ LW Sbjct: 119 PLKLFQLASRVADIFDQYLVYRPDWIVTWELGENDLSPTGSPLTQGAALPDNCLWQPLLW 178 Query: 170 KALVEYTH-QLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQ 228 +ALV+Y +LGQ WHRANL+Q + L + T LP R+F+ GIS+LPP L+ L Sbjct: 179 RALVQYNRDELGQSHWHRANLHQALVAALSNPNTDISALPRRLFVFGISSLPPQTLEVLY 238 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 ALG I + +L +PCR YWGDI D AKL + + H + Sbjct: 239 ALGSRIPVTMLSLSPCRQYWGDIVDSKLRAKLALKYKAHKMLPE---------------H 283 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ---ELDAFVDVTPDNLLHNIQSDILEL 345 + +VGNPLLA+ GK+GR+ + L+ L + + +LL +Q+DIL++ Sbjct: 284 WEETLEVGNPLLAANGKMGRELLDLVLSLPPEHFTLDDSGYETNDDSHLLGRLQNDILDM 343 Query: 346 ENR-AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT-L 403 E A ++ + ++ K LD D+S+ CHSP REVE LHD LL +L + L Sbjct: 344 EVAGAPLCADLARYQSNEGKFLLDEQDNSLVLRSCHSPLREVETLHDHLLGLLSDRQGRL 403 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 + ++I+VM+ D+ +Y+PFI AVF S + Y+PYAI+DR A + P++ F++LL + S Sbjct: 404 SAKNIVVMLPDVAAYAPFIDAVFASRRGEHYIPYAIADRGAVEESPLIHGFLTLLDINHS 463 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 RF ++L LL++P + A+F + EE L L W++E+G+RWG D + +L LPA +H+ Sbjct: 464 RFGLSEILGLLEIPAVMAKFKLDEEELSRLGNWLSEAGVRWGRDAQSREKLGLPAFDKHS 523 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 W FG+ R+LLG+++ + LP+ G A+ VG L + L+ + A Sbjct: 524 WAFGIRRLLLGFSLGDEGDFYHGTLPFAGVEGQQAQCVGKLLDFIEHLDEFAARFAAADS 583 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW----QAIIAEGLGAQYGDAVPLSLLRD 639 L + + F P E + + LI + +A+ + + L ++ Sbjct: 584 LTLKFAELSRLTDTLFAPLPEYQEELNLIRETLCDTQKALQSSASSESSLSDISLEVICQ 643 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 L +L R+ QRFLAG VN CTLMPMRSIPFKVVCLLGMN+G+YPR P+GFDLM++ Sbjct: 644 TLGSKLTDARVGQRFLAGSVNFCTLMPMRSIPFKVVCLLGMNEGIYPRVQHPVGFDLMAK 703 Query: 700 KP-KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 P +RGDRSRR DDRYLFLEAL+SA+++LYIS+IGRS +D+SER PS+LV EL+D Sbjct: 704 TPARRGDRSRRLDDRYLFLEALLSAREQLYISFIGRSERDDSERLPSMLVSELLDCCE-- 761 Query: 759 HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY--QPGERQSYAREWLPAASQAGKA 816 L+ S+ ++ L PFD + Y S+A +W P ++ K Sbjct: 762 --------LSAYVSQGKLVNRLVKQQPLQPFDHRLYLTNQDITASFAAQWCPQETRPPKP 813 Query: 817 HSE-FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 + + + + + L +L RF+ P R F Q RL+++ + D+EPF ++ L Sbjct: 814 FIDAVLDEVDEDEHKVLELASLIRFYRDPARFFCQRRLRLDLSHRLDALDDSEPFDVDAL 873 Query: 876 SRYQINQQLLNALVEQDDA------ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 RYQ+ ++LNA +E D+ + L R AG LP F ++ + + +++ + D Sbjct: 874 GRYQLQDKMLNAALEADEIRQQLAVDTLCDRLAGAGVLPMAPFDKLLFASYQRDLAPILD 933 Query: 930 RVIACRQPG--QSMEIDLACN-GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV 986 R QS+ I L N G ++ G + +V GLL RP + L+L HL Sbjct: 934 RCRFIMGETEGQSLRISLVLNQGHKLVGTIDKVFAKGLLVARPGTAKAKDVLALYLRHLC 993 Query: 987 YCASGGNGESRLFLRKDGEWR-FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAW 1045 CASG S FL G + F PL + AL L I Y E + P ++P + Sbjct: 994 LCASGYRQSS--FLLDVGNFHAFLPLTPDNALTSLEDFISHYFESVRTPSPLIPALAMTY 1051 Query: 1046 LKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAI 1105 ++ + ++ +L + TK+ + GE + +RL+ A Sbjct: 1052 IEALAEG-----ASEEESLAELSTKW-----DDGNGMGEIAEPHNERLFEFPASFATPAF 1101 Query: 1106 VEQSQRFLLPLF 1117 ++R PL Sbjct: 1102 TVVAERLWKPLL 1113 >UniRef50_Q15V11 DNA helicase/exodeoxyribonuclease V, gamma subunit n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15V11_PSEA6 Length = 1166 Score = 941 bits (2431), Expect = 0.0, Method: Composition-based stats. Identities = 408/1193 (34%), Positives = 599/1193 (50%), Gaps = 108/1193 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIV--ERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAA 58 ML + SN+++ L A + + + LDD F P+++LVQS GMAQWL++ ++Q GI+A Sbjct: 1 MLHLVQSNKMESLAAYLIGWLGESKSSLDDIFSPDVVLVQSPGMAQWLKIEIAQALGISA 60 Query: 59 NIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 NIDFPLP+S+IW ++ + ++P++SAF K +M+WKLM++LP++ +R +F + YL DD Sbjct: 61 NIDFPLPSSYIWQLYKGHVNDLPEQSAFTKDNMTWKLMSILPEMSDRTEFASIAQYL-DD 119 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL--VEGLGEAQAWQAPLWKALVEYT 176 KL+QL K AD++DQYLVYRP+W+ WE G + AQ WQ LW+ALVEY Sbjct: 120 QQPLKLYQLCQKIADIYDQYLVYRPEWILAWEQGENNVADTDVSAQPWQPILWRALVEYA 179 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 +L + +HRANL+ R + LE + L +F+ G+SA+P L+ AL K ++ Sbjct: 180 KELDESPYHRANLHTRLMAELEDTKSSKDELKP-LFVFGLSAMPVQQLEIFSALAKSRDV 238 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 + + NP +YWGDI D + + + L + L D VG Sbjct: 239 IIFWFNPSAHYWGDIVDNKQVLQAKLQ---------SLLAQASEDAQSGLSGMDDYLLVG 289 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 NPLLASWGK GRDY ++ LE DAF++ P++LL ++Q ++L L +R Sbjct: 290 NPLLASWGKQGRDYQDMILGLEVELH-DAFIEQEPESLLEHMQHEVLALTHRGAIEPLPA 348 Query: 357 E----FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 + K PL D ++ H CHS RE+EVLHD+LL + + P L P D+IVM+ Sbjct: 349 QELLTNGEEYPKIPLAEDDMTLQVHACHSAVRELEVLHDQLLHLFADHPELHPGDVIVMM 408 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 D+ SY+P I VFG ++PYAISDR A+Q P+L +FI L+SL SR DVLA Sbjct: 409 PDVASYAPIIDGVFGGTDKALHIPYAISDRNAQQESPLLNSFIQLMSLHQSRIGLSDVLA 468 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 L +VP + +FDIT E L W+ ++G+RWG D + LP Q+TW FGL R+L Sbjct: 469 LCEVPAVQRKFDITPEEFDLLSVWLADAGVRWGWDGQDKTRWALPNEPQNTWLFGLQRLL 528 Query: 533 LGYAMESA---QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 GYAM + + PY+ G +G +L L + Sbjct: 529 AGYAMGGESMFDDAHEPIAPYEHIEGQHVVALGKFYLFSRELGNALAFCQSAASLHAKIK 588 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 ++ +LPD + + + + Q + + Q+ + + EL Q L + Sbjct: 589 GALSLIEQLYLPDDDDQTYVLQLRQSLEQMT--VHEHQFSGEIVHDVFLAELEQSLSSKG 646 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS-QKPKRGDRSR 708 + QRFLAG VN CTLMPMRS+PFKVVCLLG+NDG YPRQ+ P+GFDLM K +RGDRSR Sbjct: 647 VGQRFLAGYVNFCTLMPMRSVPFKVVCLLGLNDGDYPRQVVPVGFDLMRIGKGRRGDRSR 706 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 R DDRYLFLEA++SA+++LY+S+ G S +DNS R PS+L+ EL++Y Q+ L GDE+L Sbjct: 707 RLDDRYLFLEAILSARKRLYLSFQGFSAKDNSPRSPSILLSELLEYTQQTFCLAGDESLE 766 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQ-----------PGERQSYAREWLPAASQA---- 813 + H+ H PF+P + P S+ WL A Q Sbjct: 767 TKTCADNLAKHIYHEHALQPFNPVYFATKRDAHEEEPLPSAMASFQTPWLALAQQLTDGS 826 Query: 814 --GKAHSEFVQPLPFTLPE-----TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 +F F+LPE V L+ L F+++P +AFF R Q D Sbjct: 827 VHSDKEVDFCPAPLFSLPELAQVTEVELDELLIFFSNPAKAFFSQRWQTRLTRVYDVQSD 886 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 EPF L+ LSRY +N++ + + R RA G LP G +I + ++ + Sbjct: 887 DEPFELDALSRYVLNERFVTTQQQ-----DWTTRLRAEGKLPTGNIADISLQPIRKQSRA 941 Query: 927 LADRVIACRQ------PGQSMEIDLAC-------------------------------NG 949 L D ++A P E++ Sbjct: 942 LIDALVALIGGPLDEVPPTRAEVNFELSYLLDISPVPASELNANTNSSTQNSVSATSTQR 1001 Query: 950 VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGES----RLFLRKDGE 1005 +QITGW+ + L+ WRP + +QLWL L CA+G + + + Sbjct: 1002 IQITGWVDNLYGGNLVLWRPGKVKGNNVLQLWLTWLALCANGSVAKHQRAYYIGVEDKEP 1061 Query: 1006 WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQ 1065 + + ++A L+ I +R G L P++ WL +A Sbjct: 1062 FSIGAVDKDEAKTQLAIFIRYWRLGQLQVLHFYPKTAYEWLSVGDEA------------- 1108 Query: 1066 KARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 KA K A+ G+ +GEG++ +R+ L + A E S PLF Sbjct: 1109 KALMKAKNAFYGSYFAKGEGEEPHIRRVCPDLN-QHFCAFSEVSHALFDPLFD 1160 >UniRef50_Q9CM76 RecC n=1 Tax=Pasteurella multocida RepID=Q9CM76_PASMU Length = 1124 Score = 939 bits (2426), Expect = 0.0, Method: Composition-based stats. Identities = 436/1163 (37%), Positives = 646/1163 (55%), Gaps = 88/1163 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +Y+SN LDV + ++ +++ LDDPF+ ++ILVQS GMAQWLQ ++++ GI++NI Sbjct: 1 MFTIYYSNDLDVQKNILLTLMQDT-LDDPFQSDVILVQSPGMAQWLQWKIAEQQGISSNI 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD-- 118 FP+PASFIW +V LP ++S FNK SM+W+LM L+P+ LE+ +F LRHYL+ Sbjct: 60 KFPMPASFIWQQYVDNLPNTEEQSQFNKASMTWRLMRLIPEHLEQVEFQSLRHYLSSSHQ 119 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA--------------- 163 ++++KL+QL+ + ADLFDQYLVYRP+W+A WE G + + + Sbjct: 120 TEQQKLYQLAYQIADLFDQYLVYRPEWIACWERGDEATMMAQLERKLKDTRLPIGNAFSQ 179 Query: 164 ---WQAPLWKALVEYT--HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA 218 WQA LW+ALV HRA L +F++ L++ P LP R+FI GISA Sbjct: 180 DVKWQAILWRALVADILAESGQTVPLHRAYLQTQFLQFLQTQ--HPVNLPPRLFIFGISA 237 Query: 219 LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFR 278 LP YL+ A+ ++ E+HL FTN CR YWGD+ DP ++ +L QR +P+F Sbjct: 238 LPKGYLEIFYAMSQYCEVHLFFTNGCREYWGDLIDPRFMQRLSQMQRTGYHTALPIPVFH 297 Query: 279 DSENAGQLFNSDGEQD-VGNPLLASWGKLGRDYIYLLSDLES---SQELDAFVDVTPDNL 334 ++NA + D E G+PLL+SWGKLGRD++YLL++LE + +DA+ ++T +L Sbjct: 298 HTDNARFESSYDHEHLFEGHPLLSSWGKLGRDFLYLLTELEQLEGVRSIDAYTELTSQHL 357 Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 L +Q+ IL LE + L D S+TFH CHSP REVEVLHD LL Sbjct: 358 LSQVQARILHLEGKQGLN--------------LAENDRSLTFHSCHSPMREVEVLHDYLL 403 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA--DRYLPYAISDRRARQSHPVLE 452 + ++D TLTP+DI+VMVADID Y+P+IQAVFG R +P++ISD R ++ ++ Sbjct: 404 HLFQQDSTLTPKDIVVMVADIDKYTPYIQAVFGQYNQVAQRQIPFSISDNRLSENDVLIA 463 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 +FI LL+L +S+F +ED+LALLD+P + RF I L +R WV +GIR+G++ + Sbjct: 464 SFIHLLALKESQFSAEDILALLDIPAIRNRFQIELMELEQIRHWVAHAGIRFGVEKEQ-- 521 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 ++W+ GL RMLLGYAM G WQ L +D GL +L G LA + +L+ Sbjct: 522 --GKQEKNTNSWQAGLERMLLGYAMREENGIWQGNLGFDPCYGLQGQLAGRLAEFIARLS 579 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 W + L +P+E+W +L FF D + I++ ++ + + + Sbjct: 580 AWYQFLQTPQPIEKWQQHLLTLLTDFFAEDETNITTLRYIQETIVQMVTDIQQTHFDQPL 639 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 ++ D L+ L+ + S +FLAG VN CTL+PMRSIPFKVVCLLGMN+G YPRQ P Sbjct: 640 SSEVVSDVLSALLEDDPNSMKFLAGKVNFCTLLPMRSIPFKVVCLLGMNEGDYPRQQTPN 699 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 FDLM ++ DR RRDDD YLFLEAL+SAQ+ Y+S++GRSI DN + PSVLV +LI Sbjct: 700 SFDLMQYDRRKADRFRRDDDCYLFLEALLSAQEAFYVSFVGRSIVDNQSKPPSVLVSQLI 759 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 DY+ + A L H F P N++ GE S+A +WLP A+ Sbjct: 760 DYLVDKLSSAETQDWQ---------ARLIEQHPMTAFSPDNFR-GENGSFANQWLPLANI 809 Query: 813 AGKAHSEFVQPLPFT---LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 + ++FVQP+ T + L L F HPV FF+ L V+F ++ I D+E Sbjct: 810 QKQERADFVQPIAQTVLAEDREIVLADLIAFIQHPVAFFFKRHLGVSFAKQEERIEDSEN 869 Query: 870 FILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 F L+GL RYQIN+QLL +++ + + + + G LP G F +IF Q +++ L Sbjct: 870 FTLDGLMRYQINEQLL--YCDEEKSAEVLAQLKVKGMLPRGEFAQIFALQQQEDIAALKT 927 Query: 930 RVI-ACRQPGQSMEIDLAC----NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 V +Q +E+DL +++ G L Q+ + WR + ++ W+ + Sbjct: 928 TVADYLKQEAHVVEVDLTIPSGYGDIRLIGLLDQLYAQRRVMWRVGQIQEKHLIENWVYY 987 Query: 985 LVYCASGGNGESRLFLRKDGEWRFPPLAAEQ-------ALHYLSQLIEGYREGMSAPLLV 1037 L+ CA E ++ K+G+ F L A + AL L +E Y +G +V Sbjct: 988 LIQCAMLAQHEPPIYYGKNGQATFQALCASESLSVKEIALAQLQIYVESYLQGYQQMQMV 1047 Query: 1038 LPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ- 1096 ++ +L+ + + RT EG+ G DI++QR+ Q Sbjct: 1048 PMKNIQRYLEAY-------GHTETPDFEMIRTLLHHLAEGDYASDG---DIYWQRVLAQQ 1097 Query: 1097 -LTPETMEAIVEQSQRFLLPLFR 1118 L E + AI E++ + +F Sbjct: 1098 VLDEERLNAIGERTTSWFKLMFE 1120 >UniRef50_Q3B473 DNA helicase/exodeoxyribonuclease V, gamma subunit n=1 Tax=Chlorobium luteolum DSM 273 RepID=Q3B473_PELLD Length = 1075 Score = 937 bits (2423), Expect = 0.0, Method: Composition-based stats. Identities = 373/1139 (32%), Positives = 574/1139 (50%), Gaps = 86/1139 (7%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 ++ SNR +VL A + PF E+++VQS GM +WL M L+++ G+ A Sbjct: 3 FNIHTSNRTEVLAADLASYFAASPPASPFSREVVVVQSRGMQRWLSMELARRLGVWAGAR 62 Query: 62 FPLPASFIWDMFVRVLPEIPKESA-FNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +P P + + ++F V P E+ ++ + +W +M LLP +L E F +L YL+ S Sbjct: 63 YPFPNAVVSELFRHVFPSKEDEAGRYDPECTTWSIMRLLPSMLRDEPFAILSRYLSGSSA 122 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 +L+QL++K AD FDQY ++RP+ LA WE G G WQ+ LW+ L Sbjct: 123 PLRLYQLATKIADSFDQYTLFRPEMLALWEAGE---GTAGPDGWQSILWRRLNAELGG-- 177 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 HR L + F + T P R+ + GIS LP +L L A+ +H E++L Sbjct: 178 ---RHRGILKEAFC---RNGTLPDAVFPRRIALFGISYLPQFHLDILSAIARHREVNLFV 231 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 +P YWGDI L+ + +R GNPLL Sbjct: 232 LSPTEEYWGDIVSRRTLSGMTHAER-------------------------ELHAEGNPLL 266 Query: 301 ASWGKLGRDYIYLLSDL--ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 AS G++GRD+ ++ ++ E ++ ++ ++D D LLH IQSDIL L Sbjct: 267 ASLGRIGRDFSDMVLEIPDEQNRTVERYIDPRRDTLLHAIQSDILTLSGTGEG------- 319 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 + D S+ H CHSPQREVEVLHDR+L MLE P L PRDI+VM DI++Y Sbjct: 320 ----ERPVCSATDRSVQVHACHSPQREVEVLHDRMLDMLESIPGLAPRDIVVMAPDIETY 375 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 SPFI AVFGSA A+ +P++++DRR V A + LL L SR + ++ LL P Sbjct: 376 SPFITAVFGSA-AEGRIPFSVADRRLMNEGEVSSAVLRLLELHRSRASAPELFDLLSSPP 434 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 +A RF + L+ +R W+ ++ IRWGID++ +LPA Q+TWR G+ R+LLGYAM+ Sbjct: 435 VARRFGLDVSALQSIRGWIVDTRIRWGIDEEERSMNQLPAFRQNTWRAGIDRLLLGYAMD 494 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 S + + +LP++ G AE +G A + ++ +R GL++ R LEEW ML F Sbjct: 495 SRESCCEGILPFEGVDGGAAETIGLFADFIDAVDRFRHGLSKTRTLEEWRVFFISMLEHF 554 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 L + ++ ++ + + + Y D VP ++ L RL Q+ F+ G Sbjct: 555 MLTEEDSTREFLAVQDLMERMGEISRLSAYHDEVPPEVVIAWLQGRLQQKEQGLGFMTGG 614 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 V C+++PMRS+PF+VV +LGM+DG +PRQ P GFDL+S+ PKR DRS R +DRYLFLE Sbjct: 615 VTFCSMLPMRSVPFRVVVMLGMDDGAFPRQQHPPGFDLISRHPKRADRSVRAEDRYLFLE 674 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 ++SA+ LYIS++GRS +D+S PSVLV EL D I + LP R + Sbjct: 675 TILSARDVLYISFVGRSRKDSSPIPPSVLVSELFDAIDRGFLLPE---------GVRAEE 725 Query: 779 HLTCLHTRMPFDPQNYQPGE-RQSYAREWLPAASQAGKAHSEF-----VQPLPFTLPETV 832 L H PF P + G SY+ E ++ A E P P + V Sbjct: 726 MLLFSHPLQPFSPACFSAGGPLFSYSEENFLPHAEHSGAGPEPLFMDSPLPEPGEPLQRV 785 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD 892 L L F+ +P F + RL + + + + EPF L+GL Y+I +L A++ + Sbjct: 786 ELMDLIGFYDNPSAFFLRYRLGLQPAGQVLPLDEREPFGLDGLDAYRIRAELAEAMLLEG 845 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL---ADRVIACRQPGQSMEIDLACNG 949 D R+ RFRA G LP G+ +++ ++ + R+ P +++ +L Sbjct: 846 DIGRVQDRFRAEGVLPPALSGDRLYQSLLEDAARFVRSVQRLAPISLPLPALDFELPLGP 905 Query: 950 VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNG--ESRLFLRKDGEWR 1007 + ++G L ++ G L RP+ + + M+ W+ HLV C+ G L + +G +R Sbjct: 906 MILSGRLEGLRSSGQLFARPASMKARERMRSWIFHLVLCSLRPEGVDPETLLIMNNGAYR 965 Query: 1008 FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKA 1067 E L +L+E YR G PL PE+ +W + D L+ A Sbjct: 966 LR--QPEAPGLLLQELLERYRSGQRMPLAYFPETSFSWEGKLEKGEGD-------ALKAA 1016 Query: 1068 RTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEA----IVEQSQRFLLPLFRFNQS 1122 R + + G RGEGDD ++R + + ++ A E + + P+ + +++ Sbjct: 1017 RGAWRTSGFGG--ARGEGDDPAFRRCFGEAGFDSEAAGPLYFRELAAALVRPVLQHSEA 1073 >UniRef50_Q12LP5 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Bacteria RepID=Q12LP5_SHEDO Length = 1375 Score = 921 bits (2380), Expect = 0.0, Method: Composition-based stats. Identities = 404/1324 (30%), Positives = 614/1324 (46%), Gaps = 234/1324 (17%) Query: 1 MLRVYHSNRLDVLEALMEFIVERE-RLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML + SN+++VL + ++ + E +LVQS GM+ WL++ +++ GIAA Sbjct: 1 MLTLIQSNQMEVLSEQLAKLLATPLDETNLLASEHVLVQSPGMSTWLRLEVARHNGIAAA 60 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD- 118 ++FPLP+SFIW + +LP++PK++AF K +M+WKLM LLP+LL+ DF L +YLT + Sbjct: 61 LEFPLPSSFIWQLCHTLLPDVPKDNAFTKPAMTWKLMDLLPRLLDDADFAPLANYLTTEL 120 Query: 119 -------------------------------------SDKRKLFQLSSKAADLFDQYLVY 141 D K +QL S+ AD+FDQYLVY Sbjct: 121 ATELAPELAPELATEIKPDQAAAAPDSRSQAIVLSAAQDAIKRYQLCSRIADIFDQYLVY 180 Query: 142 RPDWLAQWETGHLVE------GLGEAQAWQAPLWKALVEYTH-QLGQPRWHRANLYQRFI 194 RP+W+ WE + L ++Q WQ LW+AL++Y +LG +HRANL++ + Sbjct: 181 RPEWILAWEQNKPLTSLDNKLKLDDSQLWQPKLWRALIDYNRDELGASPYHRANLHESLL 240 Query: 195 ETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDP 254 E L + LP R+F+ GIS++PP L+ L L I + +L +PC +YWGDI DP Sbjct: 241 EALADEQSSVANLPQRLFVFGISSMPPQTLEILHQLAGRIPVVMLALSPCEHYWGDIIDP 300 Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLL 314 A++ + ++ + + +VGNPLLA+ GKLGR+ + L+ Sbjct: 301 KTRARMALQY---------------ADKKQLAQDWESSLEVGNPLLANNGKLGRELLDLM 345 Query: 315 SDLESSQEL---DAFVDV-------------------TPDNLLHNIQSDILELENRAV-A 351 L S D +V LLH +Q DIL++E V Sbjct: 346 LALPSEHTDFGYDCYVKPWDINLHSDDENDAVPVNTPQNAKLLHGVQYDILQMETLGVSL 405 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 G + ++ N+R L P D SIT CHSP REVE LH+ LLAML P L P+DI+VM Sbjct: 406 GPDAALYNNIPNRRLLQPDDDSITIRTCHSPLREVETLHNHLLAMLSRCPQLHPKDIVVM 465 Query: 412 VADIDSYSPFIQAVFGSAPADR------------YLPYAISDRRARQSHPVLEAFISLLS 459 + D+ +Y+P+I AVFG+A A+ Y+PYAI+DR A P++ +F+SLL+ Sbjct: 466 MPDVAAYAPYIDAVFGTANAEASGIDGARQQGNSYIPYAIADRGAAAESPLINSFLSLLN 525 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + SRF +++ +L+VP + RF ++ + L +R W++E+ +RWG D+ + L LPA Sbjct: 526 INQSRFALTEIMGILEVPAILRRFKLSGDELSQIRLWLDEANVRWGRDEHSRAALNLPAF 585 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 Q++W FG+ R++LGYA +Q L G A+ +G L + L L+ +R A Sbjct: 586 EQNSWAFGIRRLILGYAFHDGAPLYQDTLLVPGLEGQSAQALGKLMNFLETLDDYRALFA 645 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 L + +L F D + + I + + E GA + + + +L+ Sbjct: 646 APCTTSSRLFELQTLLQDIFEADDDEREEIQAINEAIAKLSEELNGAGHQGMLDIEVLKI 705 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 QRL + R+ QR+LAG VN CTLMPMRSIPF +VCLLGMNDG YPR P+GFDLM+ Sbjct: 706 WFNQRLSESRVGQRYLAGSVNFCTLMPMRSIPFNMVCLLGMNDGDYPRVQHPVGFDLMAH 765 Query: 700 KP-KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 K+GDRSRR DDRYLFLEAL+SA+++LYISYIG+S +DNSER PS+LV ELI+Y Sbjct: 766 FGAKKGDRSRRADDRYLFLEALLSAREQLYISYIGQSERDNSERIPSMLVSELIEYCQLC 825 Query: 759 HYLPGDEALNCDESEA-----------RVKAHLTCLHTRMPFDPQNYQPGE------RQS 801 + P + E + A L PFDP+ ++ + +QS Sbjct: 826 YLTPEMKEQLSKLDEEQILALSKPCDDALLARLIQAQPLQPFDPKLFRDNQALGIALQQS 885 Query: 802 YAREWLPAASQAGKAHSEFV-----------------------------QPLPFTL---- 828 Y +W P ++ A K + Q LP ++ Sbjct: 886 YHSQWCPPSTPANKTTTAPASAAASGSASAETSVNTWVMNSSGRFLGPNQSLPQSILADS 945 Query: 829 ------------------PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 + L L RF+ +P + FF L+V+ + + EPF Sbjct: 946 LWPQWHSDLEERAVFAATDAELELSALLRFFRNPSQFFFNRSLKVDLSLDIQADDNDEPF 1005 Query: 871 ILEGLSRYQINQQLLNALV----------------EQDDAERLFRRFRAAGDLPYGAFGE 914 L L RY + +LL+ ++ ++ L + +AAG LP F E Sbjct: 1006 SLNALERYLLQAKLLDKILAPDLDTSDLDNNGDDRKKTPEASLTQALKAAGSLPMAPFDE 1065 Query: 915 IFWETQCQEMQQLADRVIACRQP-GQSMEIDLACN------------------------- 948 + ++M L RV R + ++L Sbjct: 1066 LLLSQYQRDMAPLIGRVQFMRGEQCEPRSLNLELEFSFSPGQILANSLELSEISLEPALI 1125 Query: 949 --------------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNG 994 + + G + + P GL+ +RP ++++L HL ASG Sbjct: 1126 NSPELAHNAAQAPLKLTLLGRIDDILPKGLINYRPGAAHGRDLVRVYLRHLCLNASGQQQ 1185 Query: 995 ESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQN 1054 S L F P+ A L I Y +G + PL +P + A+++ Sbjct: 1186 TSYLLDM-AQFHSFAPITPAHATAQLKAFILAYIQGQTRPLCFMPRTAFAYVEA------ 1238 Query: 1055 DAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLL 1114 + Q+ + + GEG + RL+R T + L Sbjct: 1239 ------PGSHQEKLIAAQKLWRDEQNQLGEGFEPHNHRLFRFPDDFTESGFGAIATTLLS 1292 Query: 1115 PLFR 1118 P+ Sbjct: 1293 PMLS 1296 >UniRef50_C0N788 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N788_9GAMM Length = 1069 Score = 910 bits (2353), Expect = 0.0, Method: Composition-based stats. Identities = 374/1138 (32%), Positives = 584/1138 (51%), Gaps = 90/1138 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML++ +SN L A + + E L P +PE I+VQS +++WL + L++ IAAN+ Sbjct: 1 MLKIVYSNDTGQLAAWLADHLLSEPLP-PLQPETIIVQSNELSRWLSLRLAKTHQIAANL 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +FP P+++IW +F ++ P++P +S + K+ M+W+L LLPQ + F + YL D D Sbjct: 60 EFPFPSAYIWQLFRQLWPDVPLQSPYAKEPMAWRLFELLPQAASLDGFEAVAAYLGGDDD 119 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 K ++L+ K AD FDQYL+YRPDW+ QWE G +WQ LW+ L Sbjct: 120 DLKRYELAEKIADTFDQYLMYRPDWVQQWEQGQAT-------SWQGKLWQMLTAD----D 168 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 HRA L Q+ + L + PPGLP+R+ I GISALPPVYL+ + L ++++I L + Sbjct: 169 PQPMHRARLLQQLHDLLSHSDVVPPGLPNRISIFGISALPPVYLEIVNLLARYVDITLYY 228 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 +P +YWGDI DP + L ++ E + G+PLL Sbjct: 229 LSPSEHYWGDIIDPKKQQRQQL----------------------LLDFNEDEIEPGHPLL 266 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 AS GK G+ + L + + FV+ + +L ++ DI E+ Sbjct: 267 ASLGKQGQAFFRQLQE-TQHLDDSCFVEPVGETMLSQLKRDIFEM--------------A 311 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 +D D+SI+ VCHSP RE+E+LHD+LLAM E++PTLTP DI+VM DID Y+P Sbjct: 312 TDQPSVAVKDDTSISIQVCHSPMREMEILHDQLLAMFEQNPTLTPTDIVVMTPDIDVYAP 371 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +I+AVF +A R++P++I+D +Q ++ F S L LP SRF E +LA+L+ P + Sbjct: 372 WIEAVFATADKSRFIPFSIADSSGQQESLLITTFYSFLQLPQSRFDVESILAMLECPAVQ 431 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 RF + + L ++R+W ++ RWG+D ++ L+LP T +TWR GL R+LLGYAM Sbjct: 432 RRFGLDDAALNWIREWCQQTRTRWGLDANDKAALDLPDTESNTWRAGLDRLLLGYAMPLN 491 Query: 541 QG-----EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 + + L D SG A +V L + L+ WR+ LA++ + +W L Sbjct: 492 EPDQPWRLFDGQLAMDGISGERAHIVAALCDFIDALDAWRQRLARQNTIADWQKQLNQCL 551 Query: 596 NAFF----LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 +AFF L + + E +T I Q + + + A + + L+ L L + Sbjct: 552 DAFFNTEGLEETQFETEITAIRTQLERLSSGAKQADFEQTIGADLILSWLQSHLQPVDNA 611 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 RFL + C ++PMRSIPF VVCL+GMND V+PR+ + FDL++ + GDRSRRDD Sbjct: 612 HRFLGHGITFCGMVPMRSIPFDVVCLVGMNDEVFPRRQPSVSFDLLAHDHREGDRSRRDD 671 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 DRYLFLEAL+SAQQ Y+SY+G S+ DNSE PSVLV +L D + + E Sbjct: 672 DRYLFLEALLSAQQTFYMSYVGASVVDNSEIPPSVLVSDLQDLLAERFET---------E 722 Query: 772 SEARVKAHLTCLHTRMPFDPQNYQ--PGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP 829 + A + + H F + + + S+ P + + + F PLP Sbjct: 723 TTATILEQIITKHPLQAFSRRYFDGNNDQLFSFNASHCPT-QEMLEQANWFETPLPEADD 781 Query: 830 E--TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNA 887 V + L RF+AHP + + RL + ++ + EPF L+GL +Q+ Q +++ Sbjct: 782 SWRQVTRDQLIRFFAHPTKFILRERLGIRLELDEEALESREPFALDGLESWQLRQWIVDE 841 Query: 888 LVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP--GQSMEIDL 945 + Q E L +A G LP G G+ ++E + Q + +++ ++ IDL Sbjct: 842 SLSQHSDEGLKPVVQATGMLPQGRLGDAWFEKESQTVDDFIEKLRPVLPEQGWITLAIDL 901 Query: 946 ACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGES--RLFLRKD 1003 +G QI G LPQ GLLR+R + + W++HL+ G + + +D Sbjct: 902 NIDGFQINGQLPQFSQQGLLRYRLAKKKGKDLIAAWIDHLILNILKPEGVTLQTHLILQD 961 Query: 1004 GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDST 1063 E+ F P+ L+ L++ Y +G PL ++ A+ T + + Sbjct: 962 AEYVFLPVTGPT--QILANLLKLYWQGCHLPLKFFDQASLAFAATYFGKKP--------- 1010 Query: 1064 LQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 ++ K + + GEGDD +Y+RL+ Q P + E + + PL + Q Sbjct: 1011 -EQKFKKAHDKWSASGDFAGEGDDNYYRRLYSQ--PPLDDEFAELAIQVYEPLQQHLQ 1065 >UniRef50_Q7NQR0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Chromobacterium group RepID=Q7NQR0_CHRVO Length = 1065 Score = 907 bits (2343), Expect = 0.0, Method: Composition-based stats. Identities = 380/1128 (33%), Positives = 570/1128 (50%), Gaps = 80/1128 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +Y SNRL+ L L + + L DPF E ++VQS GM +W+ + +++K GIAANI Sbjct: 1 MLFLYQSNRLEQLGELFCGMTQAMPLADPFAAETVIVQSRGMGRWITLDVARKAGIAANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DF LPA+F W + +V+P++P++SAF + ++W+L+ LLP L F + HYL Sbjct: 61 DFALPAAFAWRLMQKVMPDLPRKSAFVPEVLAWRLLALLPSLSGEP-FGPVLHYLEGG-- 117 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + F+L+ K AD+FDQYLV+RPDW+ WE G L+ GLGE +AWQA LW+ L E Sbjct: 118 EAAAFELAGKIADIFDQYLVFRPDWIRAWEAGELL-GLGEDEAWQASLWRRLAE-----S 171 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 P HR + +F L+ P LP RV + GI++L P+YL ++ L + ++ L Sbjct: 172 DPGRHRVRMLDQFFADLK-----PEHLPPRVTLFGIASLAPMYLALVKRLSQLTDVCLFT 226 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NPC YWGDI D L KL D G+PLL Sbjct: 227 LNPCEAYWGDIVDARRLLKLRQ-------------------------AGDLFATQGHPLL 261 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 +S GK GRD+ L+++ F D LL +Q DIL+L + + Sbjct: 262 SSLGKQGRDFFELIAEDAELDAKPLFAAPKGDGLLARLQRDILQLNDPSQL--------- 312 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 RP DP D+SI H CH P RE+E L DRLLAM DP L+P D+ V+ DI++Y+P Sbjct: 313 ---PRPFDPADASIEVHACHGPMRELEALKDRLLAMFAADPKLSPADVAVLTPDINAYAP 369 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +I AVFG +PY+I+DRR + P+L F ++L L DSRF +++VLAL D P L Sbjct: 370 YIDAVFGRRDDAPNIPYSIADRRVEREQPLLSTFAAVLKLADSRFAADEVLALFDCPALL 429 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME-- 538 ARFD+ + L +++ WV ++GIRWG D + L LPA +TWR+GL R+LLG + Sbjct: 430 ARFDLADADLAFIQDWVRDAGIRWGRDAAHKASLGLPAEAAYTWRWGLDRLLLGTVLPPA 489 Query: 539 ---SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 G + +LPY + G + E + A L+ +Q ++W Sbjct: 490 LAGDDAGLFAGLLPYTAAQGQLGETLARFAGFYDALDALADAWSQPAAPQQWAQRFHQAC 549 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 + FL + + EAA+ L+ + + A +G V L++ RD L ++L +Q FL Sbjct: 550 DRLFLAEGDDEAALELLREALAELAENADLAGFGQPVGLAVARDWLLRKLSSSS-AQGFL 608 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 +G V C ++PMRSIPF+ +CL+GMNDG YPR P+ FDL+++ P+RGDRSRR DDRYL Sbjct: 609 SGGVTFCAMVPMRSIPFQALCLIGMNDGAYPRDERPVSFDLVARNPRRGDRSRRFDDRYL 668 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 FLEA++SA+ +LY+SY+G+S + PS LV EL+D + Sbjct: 669 FLEAILSARGRLYLSYVGQSARSGEPLPPSPLVSELLDTLSAMC-------------GED 715 Query: 776 VKAHLTCLHTRMPFDPQNYQPGE--RQSYAREWLPAASQAGKAHSEFVQPLPFTLPET-V 832 + A LT H PF P+ + G+ S+ + A + + FV PLP T V Sbjct: 716 MAARLTLRHPLQPFSPKAFDGGDARLASFEPAFAAALAAPPAEPAPFVAPLPDEGAATVV 775 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD 892 L RFW +P RA+ RL + P EPF + + + + +QL+ A++ Sbjct: 776 NLHDFIRFWQNPARAWLADRLALRVAYSGDAQPAREPFAMARDASHALRRQLVEAMLHGK 835 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR--QPGQSMEIDLACNGV 950 + + +R AAG LP G G+ + + + + +LA R+ + + L G Sbjct: 836 PPQPVRQRVAAAGLLPCGELGQAWLQEEGRASVRLAGRLPGALRGEALPPQPVHLEIAGF 895 Query: 951 QITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPP 1010 + G L ++P+G L + ++ AQ + LWL HL+ CAS G + D Sbjct: 896 TLVGELYGLRPEGRLDFIVGKMNAAQRVALWLSHLILCASRPAGIAPHSACYDDAGSTLL 955 Query: 1011 LAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTK 1070 A L + +++G + PL + A+ + + D L A K Sbjct: 956 HDEIDAAGLLVPWLARWKQGQAQPLPFFGRTSWAYAEALAKNPD----KPDKALAAAWQK 1011 Query: 1071 FLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 + + V + D+ +R +P + ++ LLPL Sbjct: 1012 WEPNFILGDGVA-QKDEPAIALAFRHQSPLEDPLFAQLAETLLLPLAE 1058 >UniRef50_A4JS85 DNA helicase/exodeoxyribonuclease V, gamma subunit n=11 Tax=Proteobacteria RepID=A4JS85_BURVG Length = 1209 Score = 904 bits (2335), Expect = 0.0, Method: Composition-based stats. Identities = 390/1192 (32%), Positives = 558/1192 (46%), Gaps = 110/1192 (9%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-------- 53 L + H NR + L L+ ++ L P E E ILVQS G+AQWL++ L+ Sbjct: 9 LMLIHGNRSEQLRDLLVEWIKHYPLA-PLESETILVQSNGIAQWLKLALAADRDPATGEG 67 Query: 54 -FGIAANIDFPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQLLEREDFTL 110 GIAA +D LP+ F+W + VL + + S F+K + W+LM +LP L R F Sbjct: 68 GCGIAAALDVSLPSRFVWQAYRAVLGAESVAEVSPFDKSRLVWRLMRMLPALAARPAFEP 127 Query: 111 LRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEAQ 162 LR +++DD D+RK FQL+ + ADLFDQY +YR DWLA+W G V + L + Q Sbjct: 128 LRRFISDDDDRRKRFQLAERLADLFDQYQMYRADWLARWADGDAVVLDARGGEQPLPDEQ 187 Query: 163 AWQAPLWKALVEYTHQLGQPRW-----HRANLYQRFIETLE--SATTCPPGLPSRVFICG 215 WQA LW LV R RA +++ F+ + P G+P R+ I G Sbjct: 188 RWQAALWHELVADVAGSDASREISSRGGRAAVHEAFMRRIAAWDDDRGPVGIPRRIVIFG 247 Query: 216 ISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELP 275 IS+LP L+AL AL + ++ + NPC +YW DI L +++ Sbjct: 248 ISSLPHQLLEALAALARWSQVMMCVANPCAHYWADIVPDRDLLGRRQPRQQRRTGMPAEL 307 Query: 276 LFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESS--------------Q 321 D +PLLASWGK GRD+I LL +++ Q Sbjct: 308 DL------------DTLHLHAHPLLASWGKQGRDFIGLLDAFDNADAREHYGPKFARIGQ 355 Query: 322 ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHS 381 +D F LL +Q DI +L D SI FHV HS Sbjct: 356 RIDLFESRGASTLLQQLQDDIRDLRPLRETQET--------WPDVDPATDGSIRFHVAHS 407 Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP--ADRYLPYAI 439 QREVE+LHD+LLA DP+L P+D++V+V DI++Y+P +QAVFG RY+P+++ Sbjct: 408 AQREVEILHDQLLAAFNADPSLRPQDVVVVVPDIEAYAPHVQAVFGLVDRSDPRYIPFSV 467 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 +DR R++ P++ A LL LP++R D+L LLDVP L RF I E L LR W+ Sbjct: 468 ADREQRKADPLIGALEMLLGLPNARLAVSDLLDLLDVPALRKRFGIDETDLPKLRAWIRG 527 Query: 500 SGIRWGIDDDNVRELELPATGQ----HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + IRWG+ L LP HTW FGL RMLLGYA+ S G W + P+DE G Sbjct: 528 ANIRWGLHAQQRASLGLPLDEHAAAPHTWAFGLRRMLLGYAVGSEAGAWHDIEPFDEVGG 587 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP-DAETEAAMTLIEQ 614 L A L+G L L+ L+ R LA+ +W R++ FF D+E + ++ Sbjct: 588 LDAALLGPLVRLIDALDHAWRSLAEPATAPDWCERLRNLKQTFFSAHDSEDAYTLARLDN 647 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 QA + A+ D +PLS++ D +LD+ +SQRF AG V TLMPMR+IPF+ Sbjct: 648 VLQAWLDACTEARLTDVLPLSVVSDHWLSQLDEGGLSQRFFAGAVTFATLMPMRAIPFRR 707 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 VCLLGMNDG YPR P+ FDLM + GDRSRR+DDRYL LEAL+SA+ L++S++GR Sbjct: 708 VCLLGMNDGDYPRARVPMDFDLMRLHYRPGDRSRREDDRYLLLEALLSARDHLHVSWVGR 767 Query: 735 SIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 SI DN R PSVL+ +L D++ L G D + LT H PF + Sbjct: 768 SITDNGVRPPSVLIGQLRDHLAAGWRLAGASGAGPD----ALVKALTVEHPLQPFSVAYF 823 Query: 795 QPG-----ERQSYAREWLPAASQAGKAHSEFVQPLPFT-LPETVPLETLQRFWAHPVRAF 848 P +YA EW +P + + L L F A PV+ F Sbjct: 824 PPDTNDAAAVFTYAAEWRDEPRACRDPAPPAATHVPAIVRDDPLSLRELAEFLAKPVKTF 883 Query: 849 FQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL---NALVEQDDA-----ERLFRR 900 F RL+V +++ + D EPF L+ L +++ +L+ A + DDA + Sbjct: 884 FSQRLRVALDVDETAVDDEEPFELDSLDAWKLQDELIGVQAAHMHDDDALVAARDARMAA 943 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ-----SMEIDLACNGVQ---- 951 R GD+ G FG++ + M +L E+ G Sbjct: 944 IRRRGDVVPGGFGDLASAALLEPMDELFAAYRKQLARWPVAIDGECEVAFQIAGESRVPG 1003 Query: 952 ITGWLPQVQPDGLLR-----------WRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFL 1000 ++ WL Q + D R + + W+ HL +G + + + + Sbjct: 1004 LSDWLGQWREDSEGRRARLVLETSALVEKGAYRYHKLVGHWVRHLAANLAGRH-VTTVIV 1062 Query: 1001 RKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDD 1060 K G PLA +L+ L++ + GM PL V ES AWL + + Sbjct: 1063 SKKGIVELRPLAGGDTEAHLTALLQVWDAGMREPLPVAVESAFAWLVRRFGKDGNGA-AP 1121 Query: 1061 DSTLQKARTKFLQAYEGNMMVRGEGD-DIWYQRLWRQLTPETME-AIVEQSQ 1110 + T A Y G+ +GE R + + ++ Sbjct: 1122 EDTRAAAEKAARSKYAGDAYNKGEVAKSASLGRAFPDFDALCADGRFEALAE 1173 >UniRef50_P44945 Exodeoxyribonuclease V gamma chain n=21 Tax=Haemophilus influenzae RepID=EX5C_HAEIN Length = 1121 Score = 899 bits (2324), Expect = 0.0, Method: Composition-based stats. Identities = 400/1170 (34%), Positives = 625/1170 (53%), Gaps = 102/1170 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M VY+SN+L+ + ++ + + +DPF+ ++ILVQS MAQWLQ+ L+++ GI+AN+ Sbjct: 1 MFIVYYSNQLEKQKEILSSLFKSLPPEDPFQQDIILVQSPNMAQWLQIELAKETGISANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLT--DD 118 FP+PASFIW ++ + LP E+ F+K SM W+LM L+P LE+E+F+ LR+YL+ Sbjct: 61 KFPMPASFIWQLYAQNLPATALENPFDKDSMMWRLMRLIPIFLEKENFSPLRNYLSSSPH 120 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA--------------- 163 S++ KL+QLSSK ADLFDQYLVYRP+W+ WE G + + Q Sbjct: 121 SEQYKLYQLSSKIADLFDQYLVYRPEWIFAWEKGEDEQITDQIQKQQPNLNATLFAQIQG 180 Query: 164 ---WQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 WQ LW+ALV HRA L+ +F+ L P LPSR+FI GI ALP Sbjct: 181 NTKWQGELWRALVVDVKSDVNEATHRAALHNQFLALLADKK-APKKLPSRIFIFGIPALP 239 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPA-YLAKLLTRQRRHSFEDRELPLFRD 279 YL LQA+ ++IHL F NPC+ YWGDI D + R + + ++ + D Sbjct: 240 TAYLNILQAISSEVDIHLFFNNPCQEYWGDISDLRLDYLRSRQRYQFNKQDENQPLFSED 299 Query: 280 SENAGQLFNSD-----GEQDVGNPLLASWGKLGRDYIYLLSDLESS---QELDAFVDVTP 331 + + D +GNPLLA+WGK+GRD++Y+L E ++A+ ++ Sbjct: 300 QLSQLENAQFDVTYQKENLQLGNPLLAAWGKMGRDFLYILVRDEEHIPTYPVNAYQEIES 359 Query: 332 DNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHD 391 ++LL +QS IL LEN+ + D ++T H CHS REVEVLHD Sbjct: 360 NSLLGQLQSQILHLENK---------------PLNIAKNDRTLTLHSCHSAMREVEVLHD 404 Query: 392 RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD-RYLPYAISDRRARQSHPV 450 LL + +DP+LTP+D++VMVADI+ Y+P+IQAVFG D +P+++SD + +S + Sbjct: 405 YLLDLFNQDPSLTPKDVVVMVADINQYTPYIQAVFGQKNGDVPQIPFSLSDNKLSESDVL 464 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 + ++++LL L +S F +EDVL LLD+P + RF+I+ L +R+WV +SGIR+G+ Sbjct: 465 VSSYLTLLRLKESNFSAEDVLVLLDIPAMRERFNISLADLPLVREWVTDSGIRFGL---- 520 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 + ++W+ GL RM+LGYAM QG WQ L + S GL EL G+L+ Sbjct: 521 --QKNQDGINFNSWQAGLERMILGYAMREEQGIWQDSLGLNSSYGLKGELAGNLSHFFTA 578 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 L+ L Q +E+W + +L+ FF+ + +T + I+++ + + + Sbjct: 579 LSALHETLQQAHSIEKWQEILTALLSDFFVRNEDTSDMIFYIQEKINELAEHLKTLHFNE 638 Query: 631 AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 + ++ D + +L+ S +FLAG VN CTL+PMRS+PFKVVCLLGMND YPR Sbjct: 639 ELQAEVIADVITMQLEDAPNSLKFLAGKVNFCTLLPMRSVPFKVVCLLGMNDADYPRTQT 698 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 P FDLM ++GDR RRDDDRYLFLEAL++A+ YISY+GRSI DN + PSVLV + Sbjct: 699 PNSFDLMQYHYQKGDRVRRDDDRYLFLEALLAARDYCYISYVGRSITDNQPKEPSVLVSQ 758 Query: 751 LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ--SYAREWLP 808 L+DYI Q + H F P N++ E+ S+A +WLP Sbjct: 759 LLDYINQG---------------QKENVLTVIEHPMTAFSPDNFKNNEKFTRSFATKWLP 803 Query: 809 AASQAGKA-HSEFVQPLPFTLP--ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 A + +SEF + L E V L+ L F +PV+ FF+ +L V FR +D I Sbjct: 804 IAQFDASSNNSEFAVTMTENLEKIEEVELDALVSFVENPVKFFFEKQLGVYFRDKDERIA 863 Query: 866 DTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 D+E F L GL Y +N L+ +++ + FR+ G LP FG+++ E + Sbjct: 864 DSENFTLSGLDNYSLNNDLI--YLDEQNFADYFRQAEVKGVLPRAEFGKVYAENIRDNVL 921 Query: 926 QLADRVIACRQPGQS-MEIDLACN------GVQITGWLPQVQPD--GLLRWRPSLLSVAQ 976 + ++ + + ++ +L+ + +++ G++ + D ++ W + Sbjct: 922 EFKKKIADLGEAKHASVDFNLSVDWQNENQKIRLFGYMDALFGDDSQVIHWHFAKYKDRY 981 Query: 977 GMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLL 1036 ++ W+ +L+ C + N + +D PP+ E AL L ++ Y + L Sbjct: 982 CIRPWIYYLIQCVTQENAVPAKLITQDKVLELPPIEREVALAQLQIYVKDYLQSQIEIQL 1041 Query: 1037 VLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ 1096 V T + + + D++S +K + E N G D ++ R+ Q Sbjct: 1042 VP---------TVRNISDFIVSDENSVSEK----LQELTESNGF--GPKADPYWSRVLAQ 1086 Query: 1097 LT----PETMEAIVEQSQRFLLPLFRFNQS 1122 + PE + +++Q++ + LF ++ Sbjct: 1087 TSRFKQPENIAKLLKQTKAWFGLLFAQKKT 1116 >UniRef50_A1TWK1 DNA helicase/exodeoxyribonuclease V, gamma subunit n=2 Tax=Marinobacter RepID=A1TWK1_MARAV Length = 1197 Score = 893 bits (2307), Expect = 0.0, Method: Composition-based stats. Identities = 390/1216 (32%), Positives = 577/1216 (47%), Gaps = 137/1216 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-------- 53 H+N L+ L + +I + + P + E LVQS G+AQWL++ L++K Sbjct: 11 FHAIHANHLEDLRRAVVYICRQNPMP-PLQSETFLVQSNGIAQWLKLALAEKRTEDGVEG 69 Query: 54 -FGIAANIDFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLL-EREDFT 109 GIAA +DF PA FIW + VLP+ +P++S F+K+ + W+L LLP+L+ + E FT Sbjct: 70 GLGIAAGMDFLFPARFIWQAYRAVLPDGEVPEQSPFDKRRLVWRLYRLLPELVGQDEAFT 129 Query: 110 LLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEA 161 L +L + FQL+ K ADLFDQY V+R DWLA WE G V + L Sbjct: 130 PLARFLDGRDTDLRNFQLAEKVADLFDQYQVFRADWLAAWEQGKDVVITARGEEKALDTE 189 Query: 162 QAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCP--PGLPSRVFICGISAL 219 WQ LW+ LVE + R+ ++ RF+ + + LP R+ + G+S+L Sbjct: 190 ACWQPLLWRKLVEDVG--SEAHTSRSQIHTRFMAQGQHISEPANASRLPKRIVVFGVSSL 247 Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 P L+AL L + ++ L NPC++YW DI L K ++ Sbjct: 248 PRQALEALYVLSRFSQVVLCVHNPCQFYWADIISDRELLKAERKRGAAHPV--------- 298 Query: 280 SENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE-----------LDAFVD 328 Q+ + D NPLLA+WGK GRDYI LL + ++ + +D F D Sbjct: 299 ---LSQIDDPDQLHQHANPLLAAWGKQGRDYIRLLDEFDNPDDYRASFQTPGQKIDIFTD 355 Query: 329 V---TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQRE 385 LLH +Q+DI L R + D S+ FH H PQRE Sbjct: 356 HGDVDNPCLLHQLQNDIHNLTPLQEI--------RQQQRTVDLTRDHSVVFHDAHGPQRE 407 Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA--PADRYLPYAISDRR 443 VE+LHD+LLA DPTL PRD+IVMV DI+ Y+P IQAVFG R++P+ ISD+ Sbjct: 408 VEILHDQLLAAFNADPTLRPRDVIVMVPDINVYAPHIQAVFGRYSPGRKRHIPFTISDQG 467 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 R PVL A +L+SLP SRF ++++LL+V + RFDI+E+ + R+WV + IR Sbjct: 468 QRHHEPVLIALETLMSLPRSRFGVSEIISLLEVAGIRDRFDISEDDIPLARRWVEGANIR 527 Query: 504 WGIDDDNVRELELPAT-GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 WG+ + L+LPA ++TW+ GL MLLGY M W V PY E GL A L G Sbjct: 528 WGLHGKHRESLDLPAELERNTWQAGLRAMLLGYGMGD-DQPWGGVEPYGEIGGLQASLAG 586 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF-LPDAETEAAMTLIEQQWQAIIA 621 L + QL + L R EW + ML FF + + + +Q + + Sbjct: 587 RLGEFVHQLEALWQALQATRTPGEWEALFSAMLEQFFHKVEGQDLLLLNRFRRQLEQWLD 646 Query: 622 EGLGAQYGD-AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 + L A +PL++++D L Q LD+ ++QRFLAG VN TLMPMR+IPF+ VCLLGM Sbjct: 647 DALAAGLEQQPLPLNIVKDVLLQGLDEGGLNQRFLAGKVNFATLMPMRAIPFRKVCLLGM 706 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 NDG YPR P+ FDLM+Q + GDRSRR+DDRYLFLEAL+SA+++LYIS++GRSI+D+S Sbjct: 707 NDGDYPRSRPPVDFDLMAQDYRPGDRSRREDDRYLFLEALLSAREQLYISWVGRSIRDDS 766 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY------ 794 ER PSVL+ +L D++ + G + V LT H PF + Sbjct: 767 ERPPSVLISQLQDHLNSLWKVAGQPDGS-------VTKALTTQHPLQPFSRDYFPRTNGV 819 Query: 795 ---------------QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQR 839 Q +Y REW A + S P T E + L L Sbjct: 820 GDGEETQPKPLADVLQARGLFTYEREWRSAHAVDNPEQSREALPY-QTPEEPISLTELAN 878 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER--- 896 F P+ F+Q RLQV F + + D E F L GL R++++ +L++ V + +E Sbjct: 879 FLKKPIDTFYQRRLQVRFEAVEEDDTDNENFDLNGLDRWRLDNELIHEGVVKAASEEELH 938 Query: 897 -----LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ-----SMEIDLA 946 R GDL G + L R + + Sbjct: 939 ERLEATLDRMARRGDLGMGVTEHRLRTELAGRLPDLFQRYRGALAEWPEAVAEPLPFEFR 998 Query: 947 ----CNGVQITGWLPQVQPD------GLLRWRPS---------LLSVAQGMQLWLEHLVY 987 V++ + ++ + L+ + A ++ WL HL Sbjct: 999 YSDSTGAVEVADLIDNLRCNPAGQLCRLVIASSGLLTGSGYSKKVRYANLLRDWLVHLAG 1058 Query: 988 CASGGNGESRLFLRKDG-EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWL 1046 SG E+ + +++G ++RFP +A EQA + ++ + E + L + E+G AW+ Sbjct: 1059 QLSGQPFETVILGKEEGRKFRFPVMAPEQAQKHFEAILGRWMEATTRTLPIHCEAGFAWI 1118 Query: 1047 KTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETME-AI 1105 + Y + ++ D + + +A + D + + Sbjct: 1119 TSFYGGKK-SVGDHERAISEAEQA--------YSTALDRDTGYLLGAFESPEALMASGEF 1169 Query: 1106 VEQSQRFLLPLFRFNQ 1121 + +PL+ Q Sbjct: 1170 EALLHQLYVPLWEAEQ 1185 >UniRef50_D2BZV3 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Gammaproteobacteria RepID=D2BZV3_DICD5 Length = 1169 Score = 890 bits (2300), Expect = 0.0, Method: Composition-based stats. Identities = 410/1180 (34%), Positives = 584/1180 (49%), Gaps = 99/1180 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-----FGI 56 L HSN + L ++ + L E E+ILVQS G+ QWL++ L++ G+ Sbjct: 10 LMAIHSNHPEALRDVLVSWMAAHPLSG-LENELILVQSNGIGQWLKLALARDTHDGGCGV 68 Query: 57 AANIDFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHY 114 AA +D LP+ F W + VL +P+ S F+K + W+L+ LLP LL + +F L + Sbjct: 69 AAALDIQLPSRFFWQAYRAVLGREQVPETSPFDKPLLVWRLLRLLPDLLTQPEFAALARF 128 Query: 115 LTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEAQAWQA 166 L D+D RK +QL+ + ADLFDQY VYR DWLA W G V E L E Q WQ Sbjct: 129 LRQDTDLRKHYQLAERLADLFDQYQVYRADWLADWSEGRDVLTSHRRGVEPLPEEQRWQP 188 Query: 167 PLWKALVEYTHQLGQPRWHRANLYQRFIETLES--ATTCPPGLPSRVFICGISALPPVYL 224 LW+AL+ T + RA L++RF++ ++ + P GLPSRV + GIS+L L Sbjct: 189 LLWRALLADTGE-ALSGTSRAALHRRFLDEVDRRGDSERPAGLPSRVVVFGISSLSQQAL 247 Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG 284 + L A+G+ ++ + NPC +YWG+I L + +++ E+ Sbjct: 248 ELLAAIGRWTQVFMCVHNPCEHYWGNIIADKDLLRAERARQQRKPGMPEVIAL------- 300 Query: 285 QLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE-----------LDAFVDVTPDN 333 + +PLLA+WGK GRDYI LL + + ++ +D F D Sbjct: 301 -----EELHQHAHPLLAAWGKQGRDYIGLLDEYDQREQYESLLQPVISRIDLFNSNGEDC 355 Query: 334 LLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL 393 LLH +Q DI +L A + RS DSS+ FH+ HSPQREVEVLHD+L Sbjct: 356 LLHQLQDDIRDLRPLAES--------RSRWPAIDSDQDSSVRFHLAHSPQREVEVLHDQL 407 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP---ADRYLPYAISDRRARQSHPV 450 LA DPTL P D+IVMV DI+SY+P IQAVFG RY+P++++DR ARQ++ V Sbjct: 408 LAAFAADPTLRPSDVIVMVPDINSYAPHIQAVFGLIDRQKDPRYIPFSVADRGARQNNLV 467 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 L A LL LP SR DVL LLDVP + RF I EE L L++W+ + +RWG+ Sbjct: 468 LAALEKLLHLPQSRVAVSDVLDLLDVPAVRQRFAIEEEQLPLLQRWIRAANVRWGLHARQ 527 Query: 511 VRELELP-ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 + L LP A Q++W FGL RMLLGYA+ + G W+ + P DE GL A L G LA LL Sbjct: 528 RQSLNLPDAPEQNSWFFGLRRMLLGYAVGAG-GAWRDIEPLDEIGGLDAALAGQLAWLLD 586 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA-MTLIEQQWQAIIAEGLGAQY 628 +L+ + L Q +W R +L+ FF D + + +++ Q + Sbjct: 587 RLDYSWQQLCQPATPVQWCERLRVLLSTFFAADDGEDGFMLLQLDEGLQNWLEACESVAL 646 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 +PLS++R+ +Q ++Q F AG V TLMPMR+IPF+ VCLLGMNDG YPR Sbjct: 647 TQELPLSVVREHWLGLFEQTSLTQPFFAGAVTFATLMPMRAIPFRHVCLLGMNDGDYPRN 706 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 PL FDLM Q + GDRSRR+DDRYLFLEAL+SA+++LYIS++GRSI DNSER PSVLV Sbjct: 707 RVPLDFDLMGQDYRPGDRSRREDDRYLFLEALLSARERLYISWVGRSIHDNSERPPSVLV 766 Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE-RQSYAREWL 807 +L D++ + V LT H PF P+ + G SYAREW Sbjct: 767 AQLRDHLSNGWRIVN---------GQDVLPALTVEHRLQPFSPEYFTAGSSLFSYAREWR 817 Query: 808 PAASQAGKAHSEFVQPLPFTLPE-----TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 A S+ L + + L L F PVR+FF++RL V F ED Sbjct: 818 AGLPSYDGASSQTAAASDAVLDDYVQDGVLTLRQLADFVRDPVRSFFRLRLNVWFEQEDP 877 Query: 863 EIPDTEPFILEGLSRYQINQQLLN--------ALVEQDDAERLFRRFRAAGDLPYGAFGE 914 D EPF ++ L +++ +L+ + + +R G+L G F Sbjct: 878 TSQDQEPFAIDALENWRLQHELIQVQKAALQRQIPREQALAEHLQRITRRGELAPGGFAT 937 Query: 915 IFWETQCQEMQQLADRVIACRQPGQSM--EIDLACNGVQITGWLPQVQPD---------- 962 + + + M L R R + + L+ + + WL +++ D Sbjct: 938 VLEQDLAEPMADLFTRYEQERDKWPTPIPDEPLSLPELPLEDWLNELRLDEQGNRCRLVL 997 Query: 963 ---GLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHY 1019 GLL + + + W+ HL GG+ + K+G P L QA Y Sbjct: 998 ESGGLLHPTRRSYRLDKLLPFWVAHLAGH-LGGHALHSTLVSKNGTVHLPALEPAQAAAY 1056 Query: 1020 LSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNM 1079 L++ +REGM PL V ++G WL+ D + AR + + N Sbjct: 1057 WQSLMDAWREGMRCPLPVAVKTGFRWLEV---GGELGQSADGEAGKAARQCYEEHDPANR 1113 Query: 1080 MVRGEGDDIWYQRLWRQLTPETME-AIVEQSQRFLLPLFR 1118 + + R + + Q+ L PL Sbjct: 1114 KYAESASNPYLARAFPTFEHLWADGEFARWVQQLLAPLHH 1153 >UniRef50_C1DMH2 Exodeoxyribonuclease V, gamma subunit n=18 Tax=Gammaproteobacteria RepID=C1DMH2_AZOVD Length = 1168 Score = 885 bits (2286), Expect = 0.0, Method: Composition-based stats. Identities = 431/1179 (36%), Positives = 597/1179 (50%), Gaps = 93/1179 (7%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK--FGIAAN 59 L V H NRL+ L L + R L P E E++LVQS G+ QWL++ L+ + GIAA Sbjct: 11 LMVVHGNRLEALRELAVEWMRRHPLA-PLEDEVVLVQSNGIVQWLKLALAGRDGCGIAAA 69 Query: 60 IDFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD 117 I LPA F+W + VL IP+ES +K ++W+LM LLP LLE E F LR +L D Sbjct: 70 IRVELPARFLWQSYRAVLGSAGIPRESPLDKAPLTWRLMRLLPNLLEGEAFAPLRRFLED 129 Query: 118 DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL--------VEGLGEAQAWQAPLW 169 DSD RK QL+ + ADLFDQY VYR DWLA W GH L EA WQ LW Sbjct: 130 DSDLRKRHQLAERLADLFDQYQVYRADWLADWAEGHDRLRTSRDGARPLDEAARWQPALW 189 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 +AL+ + RA ++ RF+E L PPGLP RV + GIS+LP L+AL A Sbjct: 190 RALLADVGRDTV-ATSRAGVHLRFVERLRGLDAPPPGLPRRVMVFGISSLPAQALEALAA 248 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L + ++ L NPCRY+WGDI L + R++R + ++ Sbjct: 249 LARFSQVLLCVHNPCRYHWGDIVPDQDLLRHQYRRQRRK------------DGMAPGLSA 296 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE-----------LDAFVD---VTPDNLL 335 + +PLLA+WGK GRDYI LL + + +D F + P +LL Sbjct: 297 EDLHQHAHPLLAAWGKQGRDYINLLDRYDDPEHYRERFASLGGRIDLFDEEDGPRPGHLL 356 Query: 336 HNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA 395 +Q DIL L R + D S+ FH+ HS QREVE+LHD+LLA Sbjct: 357 GQLQDDILHLRTLEET--------RKEWPLVDPKADRSLRFHIAHSAQREVEILHDQLLA 408 Query: 396 MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA--PADRYLPYAISDRRARQSHPVLEA 453 DP L PR++IVMV D+++Y+P IQAVFG DRY+P++++D+ R P+ A Sbjct: 409 RFAADPGLRPREVIVMVPDVNAYAPHIQAVFGQYARDDDRYIPFSLADQGQRGCDPLPIA 468 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 LL LP+ R +VL LLDVP L ARF I E L LR+W+ +GIRWG+D + Sbjct: 469 VEQLLKLPEGRLTVSEVLDLLDVPALRARFAIEESDLPTLRRWIEGAGIRWGLDAERRAG 528 Query: 514 LELPA-TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 L LPA Q+TWRFGL RMLLGYA+ S + P+DE GL A L+G L LL L+ Sbjct: 529 LGLPAGLEQNTWRFGLRRMLLGYAVGSGAPC-AGIEPFDEIGGLEAVLIGPLVRLLEALD 587 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT-LIEQQWQAIIAEGLGAQYGDA 631 R LA+ EW + + ML FFL +E + + + + + + G + Sbjct: 588 DLHRRLARPVAPAEWGRILQAMLGDFFLARSERDETLLGQLGEALEEWLELCAGVDLDEP 647 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 +PL ++R+ LD+ R+SQRFLAG VN CTLMPMR+IPF+VVCLLGMNDG YPR P Sbjct: 648 LPLGVVREAWLGLLDRGRLSQRFLAGAVNFCTLMPMRAIPFRVVCLLGMNDGDYPRSQTP 707 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 L FDLM+ + GDRSRR+DDRYL LEAL++A+++LY+S++GRS++DN ER SVLV +L Sbjct: 708 LDFDLMAGDYRPGDRSRREDDRYLLLEALLAAREQLYVSWVGRSVRDNCERPASVLVGQL 767 Query: 752 IDYIGQSHYLPG---DEALNCDESEARVKAHLTCLHTRMPFDPQNYQ-PGERQSYAREWL 807 D++ LP + + + + R+ A LT H PF + ++ SYAREW Sbjct: 768 RDHLASGWRLPEEYHEASDSEADKAKRLLAALTTEHPLQPFSRRYFEGDDALFSYAREWA 827 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 + A + P PF + LETLQ F PV+ FF RL+V+ D Sbjct: 828 ALHRRDAPAGAARALP-PFEPDGALALETLQNFLRDPVKHFFTQRLKVHLDESMQAQLDE 886 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAE---------RLFRRFRAAGDLPYGAFGEIFWE 918 EPF L+GL +Q+ Q LL+A + + R + +G LP FGE E Sbjct: 887 EPFGLDGLQLHQLRQSLLDAASLALEDDPARVEAALEAAALRLQRSGRLPLAGFGERLRE 946 Query: 919 TQCQEMQQLADRVIAC-----RQPGQSMEIDLACNGVQITGWLPQVQPD---GLLRWRPS 970 + + + R + + + GV++ GWL ++ + L R Sbjct: 947 QLLKPLPEQMRRYQSLCSLWSTRLESPKPLWFEHEGVELAGWLGGLRENAGGALARIELQ 1006 Query: 971 LLSVAQGMQLWLEHLVYC--------ASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQ 1022 + +G W H + A+ G + L + +D F P+ +A L Sbjct: 1007 PGELKRGKDDWKWHRLLRPWVAHVAAAACGAPLTSLLVGQDASLEFAPIEQARAQAILRL 1066 Query: 1023 LIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVR 1082 +E +R G+ APL V + AWL ++ + D A +AYEG Sbjct: 1067 WLEAWRAGLEAPLPVALNTAIAWL--------NSGEEGDEEGGTAEKAAREAYEGGYNRS 1118 Query: 1083 GEGD-DIWYQRLWRQLTPETMEA-IVEQSQRFLLPLFRF 1119 GE R + + E S+ L Sbjct: 1119 GELAGSASLARQYPTFDDLIADRDFYEWSRDLYQSLLDH 1157 >UniRef50_C0QI08 RecC n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QI08_DESAH Length = 1206 Score = 880 bits (2274), Expect = 0.0, Method: Composition-based stats. Identities = 379/1222 (31%), Positives = 574/1222 (46%), Gaps = 142/1222 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK--FGIAAN 59 L + H+N L+ L + V L E E +VQS GMAQWL++ ++ GI+A Sbjct: 16 LSIIHANHLEDLRDVAVHWVRTHPL-GVLETEQFIVQSKGMAQWLKLAVAADDGCGISAG 74 Query: 60 IDFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD 117 I+ LP +++W + +L IP +S ++++ + W+ ++LP LL + F+ L +L + Sbjct: 75 IETQLPGTWVWTAYRAILGNDTIPTDSPYDRERLVWRFFSILPTLLTDDIFSPLNRFLEN 134 Query: 118 DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEAQAWQAPLW 169 D+D+R+ +QL+ + ADLFDQY VYR DWL QW + AWQA LW Sbjct: 135 DTDQRRQYQLACRLADLFDQYQVYRADWLKQWAGEKDQLLTGGGQWVDIPPQHAWQAELW 194 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 + L R++L+Q F++ P LP RV + GIS+LP L+ L A Sbjct: 195 RRLRARV-PASLRNIGRSDLHQAFLQKASDTRVRPEILPPRVIVFGISSLPKQVLETLYA 253 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 + ++ L NPCR++W DI + L ++ + D Sbjct: 254 VSHLCQVLLFVNNPCRHFWADIIEDRELLRIDHARHSGKATMPTPLDPVDV--------- 304 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ-------ELDAFVD----VTPDNLLHNI 338 NPLLA+WGK GRDYI L+ ++ + E+D F D T LLH I Sbjct: 305 ---YRHANPLLAAWGKQGRDYIGLVYGYDTPETYRKNFAEIDLFRDVIAQDTRGTLLHEI 361 Query: 339 QSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 Q IL+LE A ++++RP+ D +ITF V HS QREVE+L D+LL E Sbjct: 362 QQAILDLEPSAP---------DNESRRPIARGDRTITFQVAHSRQREVEILQDQLLHSFE 412 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGS--APADRYLPYAISDRRARQSHPVLEAFIS 456 L PRD++VM DI+ Y+P I+AVFG+ R++P+ I+D ++S P+++A Sbjct: 413 TLDNLLPRDVVVMTPDIEGYAPHIEAVFGNLSLDDPRFIPFTIADHPGKKSVPLVKALER 472 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 LL LPD R + D++ LL+VP RF E L L QW+ +GI WG++ L Sbjct: 473 LLHLPDLRMAARDLMDLLEVPAFQRRFGFKETDLPRLFQWIKGAGISWGLNKSQRASFGL 532 Query: 517 PAT-GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 P Q TW FGL RMLLGYA+ + + W ++ PYDE GL A LVG +A ++ +L Sbjct: 533 PPDLDQTTWAFGLNRMLLGYAVGNNKA-WHNIEPYDEIGGLEAHLVGLVAGVVERLEALW 591 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEA-AMTLIEQQWQAIIAEGLGAQYGDAVPL 634 L E W + R + FF P +E + ++Q + A + L Sbjct: 592 TTLQSSACPERWCLILRTLARDFFEPVDASERLVLNRMDQVLDDWLNACTQADLDQELTL 651 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 ++RD +++ + +SQ+FLAG VN TLMPMR+IPFKVVCLLGMNDG +PR PL F Sbjct: 652 CVVRDYFLEKMAVQGVSQKFLAGMVNFGTLMPMRAIPFKVVCLLGMNDGAFPRSHPPLDF 711 Query: 695 DLMSQ--KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 DLM++ + GDRS R+DDRYLFLEAL+SA++ Y+S++GR ++DN ER PSVLV +L Sbjct: 712 DLMAEPGMYRPGDRSTREDDRYLFLEALLSARETFYLSHVGRDVRDNGERTPSVLVGQLR 771 Query: 753 DYIGQSHYLPG----------------------DEALNCDESEARVKAHLTCLHTRMPFD 790 DYI L E+ + + + HLT +H PF Sbjct: 772 DYIDAGWTLEPGCAEPERPESECSEPERLGSECPESGQPNYEGSGLLDHLTTIHPLQPFG 831 Query: 791 PQNYQPGE--RQSYAREWLP-AASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRA 847 + E +YA+EW + + EF++ P + + L L F +PV+ Sbjct: 832 RAYFSSPEAPLFTYAQEWRNCLGRREDQPREEFLETPPCV--DALTLSPLIGFMKNPVKF 889 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF--------- 898 F+ L + F E D EPF L+ L+ + + LL+A + + L+ Sbjct: 890 FYNHCLSIRFDDISLENLDHEPFALDLLAPFNLGATLLSAGLAAGVSPELYPGRGGPCVV 949 Query: 899 --------RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ----SMEIDLA 946 R G+LP FG + + + + R + + MEI L Sbjct: 950 EAAVVEAADRLTRTGELPMAGFGTLAAKNLTAPVIAMLTRYGSLAERWPRACDPMEIALV 1009 Query: 947 CN-----GVQITGWLP--------------------QVQPDGLLRWRPSLLSVAQGMQLW 981 +++ WL Q P +L LL + + LW Sbjct: 1010 IEQDGWPEIRLDDWLDNMITTDFDDPGAILPQFARQQFYPRNILDKGGKLLLLYPLVPLW 1069 Query: 982 LEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPES 1041 + H+ CA G + + D F PL A L ++ +R+G++ PL V ++ Sbjct: 1070 ISHVAGCAMGI-DLTSHLIAPDAVAAFHPLDKAAAFSVLMDILTVFRQGLARPLPVTAKT 1128 Query: 1042 GGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGN-MMVRGE-GDDIWYQRLWRQLTP 1099 G A++ Q+A+ + Y G+ RGE G D + QR + Sbjct: 1129 GVAYVAALMAKDE----------QRAKNDAARVYAGDGFNARGELGYDPYLQRTFPDFDA 1178 Query: 1100 ET---MEAIVEQSQRFLLPLFR 1118 + + LP+ + Sbjct: 1179 LWQARDNFFKDLAATLYLPMVQ 1200 >UniRef50_A3JIN1 Exodeoxyribonuclease V gamma chain n=2 Tax=cellular organisms RepID=A3JIN1_9ALTE Length = 1224 Score = 880 bits (2273), Expect = 0.0, Method: Composition-based stats. Identities = 387/1230 (31%), Positives = 568/1230 (46%), Gaps = 144/1230 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-------- 53 H+N L+ L + FI ++ L P + E LVQS G+AQWL++ L++K Sbjct: 19 FHAIHANHLEDLRRAVVFICQQNPLP-PLQSETFLVQSNGIAQWLKLALAEKRSENGSEG 77 Query: 54 -FGIAANIDFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQL-LEREDFT 109 GIAA +DF PA FIW + VLP+ +P++S F+K+ + W+L LLP+L L E F Sbjct: 78 GLGIAAGMDFLFPARFIWQAYRAVLPDGDVPEQSPFDKRRLVWRLYRLLPELVLTDEAFN 137 Query: 110 LLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEA 161 L +L + FQL+ K ADLFDQY V+R DWLA WE G V + + + Sbjct: 138 PLARFLDGSDTDLRAFQLAEKVADLFDQYQVFRADWLAAWEQGRDVVISTRNGEKPIEQD 197 Query: 162 QAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTC--PPGLPSRVFICGISAL 219 WQ LW+ LVE T + R+ ++ RF++ + P LP R+ + G+S+L Sbjct: 198 TRWQPMLWRKLVEDTG--AEAHTSRSQIHTRFMKQGQQVAAPSHPSRLPKRIVVFGVSSL 255 Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 P L+AL L + ++ L NP ++YW DI L K ++ Sbjct: 256 PRQALEALYVLSRFSQVVLCVHNPSQFYWADIVSDRELLKAERKRGASH----------- 304 Query: 280 SENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE-----------LDAFVD 328 Q+ ++D NPLLA+WGK GRDYI LL + ++ E +D F + Sbjct: 305 -PTLSQIDDADQLHQHANPLLAAWGKQGRDYIRLLDEFDNPDEYRNSFQTPDQKIDIFSE 363 Query: 329 V---TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRP------------------- 366 LLH +Q+DI L + S Sbjct: 364 HGAGQTTCLLHQLQNDIYNLTPLQEIRDEQRKLDLSQGHPLTAEGSLSAEGSLSAEGSLP 423 Query: 367 ---------LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 D S+ FH HSPQREVE+LHD+LLA D TL PRDI+VMV DI+ Sbjct: 424 AEGSLSSEGFPKADGSVAFHNAHSPQREVEILHDQLLAAFNADDTLRPRDIMVMVPDINV 483 Query: 418 YSPFIQAVFGSA--PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 Y+P IQAVFG R++P+ ISD+ R PVL A +L+SLP RF ++++LL+ Sbjct: 484 YAPHIQAVFGRYTAGRKRHIPFTISDQGQRNHEPVLIALETLMSLPRHRFGVSEIISLLE 543 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT-GQHTWRFGLTRMLLG 534 VP + RF+I EE + R+WV + IRWG+ + LELPA ++TW+ GL MLLG Sbjct: 544 VPGIRDRFEIAEEEIPLARRWVEGANIRWGLHGAHRESLELPADLDRNTWQSGLRSMLLG 603 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 Y M W V PY E GL A L G L + +L + L R +EW + M Sbjct: 604 YGMGD-DEPWAGVQPYGEIGGLQASLAGRLGDFVYRLEKVWQDLQASRTPQEWEALFAAM 662 Query: 595 LNAFF-LPDAETEAAMTLIEQQWQAIIAEGLGAQYG-DAVPLSLLRDELAQRLDQERISQ 652 L FF + + +Q + + + L A +PL++++D L LD+ ++Q Sbjct: 663 LEQFFHKVEGHDLLLLNRFRRQLEQWLDDTLAAGLEHQLLPLNIVKDVLLDGLDEGGLNQ 722 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 RFLAG VN TLMPMR+IPF+ VCLLGMNDG YPR P+ FDLM+Q + GDRSRR+DD Sbjct: 723 RFLAGKVNFATLMPMRAIPFRTVCLLGMNDGDYPRSRPPVDFDLMAQDYRPGDRSRREDD 782 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 RYLFLEA++SA+++LYIS++GRSI+D+S R PSVLV +L D++ LPG + Sbjct: 783 RYLFLEAMLSAREQLYISWVGRSIRDDSPRPPSVLVGQLQDHLNGLWQLPGQPDV----- 837 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGE----RQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 V LT H PF + +Y EW A Sbjct: 838 --AVTDALTTCHPLQPFSRDYFPQSRHARSLFTYEHEWRRAHGTVSTDAQHKALAY-QQP 894 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 E V L L F P+ F+Q RLQV F + + DTE F L GL R++++ +L+ Sbjct: 895 EEPVTLNDLSGFLKKPIDTFYQRRLQVRFEDVEDDDTDTENFDLNGLDRWRLDTELIEQG 954 Query: 889 VEQDDAER--------LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ- 939 + + +E GDL G + L +R + Sbjct: 955 LLKASSEEDLEHRLETTLDCMARRGDLGMGTTEHRLRNELSGRLPNLFERYQSALAEWPE 1014 Query: 940 ----SMEIDLACNGVQ-------ITGWLPQVQPDGLLRWRPS------------LLSVAQ 976 + + + L + + R + + A Sbjct: 1015 EVGEPLAFEYRLANSTGSVEVLDLIDHLRRNHEGNICRLVIAGSSLLTGSGNTKKIRYAN 1074 Query: 977 GMQLWLEHLVYCASGGNGESRLFLRKDGE-WRFPPLAAEQALHYLSQLIEGYREGMSAPL 1035 M+ W+ HL + E+ + +++ RF PLA E A +L ++ + + + L Sbjct: 1075 LMRDWVIHLAGQIAAQPFETLILGKEEKRNVRFAPLAKETASKHLDAILARWMDANTRAL 1134 Query: 1036 LVLPESGGAWLKTCYDAQNDAMLDDDS--TLQKARTKFLQAYEGNMMVRGEGDDIWYQRL 1093 V E+G AW+ + Y ++ + + ++A T L E D + + Sbjct: 1135 PVHCEAGFAWIYSFYQSKKFLGEHEHAISDAEQAYTLAL-----------ERDTGYLRGA 1183 Query: 1094 WRQLTPETME-AIVEQSQRFLLPLFRFNQS 1122 + + +PL+ Q+ Sbjct: 1184 FESAELLLESGEFEALLHQLYVPLWEAEQN 1213 >UniRef50_Q7VRF1 Exonuclease V, subunit n=2 Tax=Candidatus Blochmannia RepID=Q7VRF1_BLOFL Length = 1139 Score = 873 bits (2255), Expect = 0.0, Method: Composition-based stats. Identities = 386/1151 (33%), Positives = 631/1151 (54%), Gaps = 43/1151 (3%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M VYHSN LD+ L+ ++ ++L +P +PE+IL++ M+QW+++ L+ FGI+ANI Sbjct: 1 MFMVYHSNCLDLFMRLVINVMSNQKLSNPMKPEIILIEHKIMSQWIEIELTNYFGISANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 F SFI + + +L + S F+K M WK M +LP+L + +++ YL D + Sbjct: 61 IFMTIQSFIRKISIELLSDGIFISNFSKNFMYWKFMEILPKLYSSQKCAVIQKYLCFDVN 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLG-EAQAWQAPLWKALVEYTHQL 179 ++KL QLS + LF +YL+YRPDWL W++ +++ L E Q WQ+ +W+ + +T Sbjct: 121 QKKLGQLSEQLVSLFLEYLIYRPDWLDMWKSNKIIDNLNIEHQLWQSEVWRMFLTHT--- 177 Query: 180 GQPRWHRANLYQRFIETLESA--TTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIH 237 Q + + N R I L++ LP R+FI G++A+ P+Y + L+ L HI+I+ Sbjct: 178 -QLQLYEFNSENRCIFLLQNNYQQIDWTKLPDRIFIYGVTAIAPIYWKILKLLSDHIDIY 236 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLL-TRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 L NPC YW + + K + + HS+E R+ + + N L ++ Sbjct: 237 LWVINPCEKYWNNTDYMDDINKHVYHQSNNHSWEVRKKYYYNNRCNKSILKSN------- 289 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQ-ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 LL SWG++G ++LLS LE E+ +FV +++LH +Q++IL+ + + V Sbjct: 290 YSLLNSWGEVGFHTLHLLSQLERPLFEIQSFVFPKTNSMLHILQNEILQFKQYSSNEVQK 349 Query: 356 EEFSRSDN----KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 E + K L D SIT H CHS RE+EVLHD LL M D L P ++IVM Sbjct: 350 ESSIFKKSANMQKNILKSTDQSITIHECHSLYREIEVLHDNLLRMFSNDSALLPGEVIVM 409 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 +I+ Y+ I+++F + +R LP++I SD HP++ +++L++P SRF E++ Sbjct: 410 APNINCYTESIKSIFNNMF-NRQLPFSILSDHSDYIHHPIISTILNILAIPTSRFTVEEI 468 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 +LL +P +A++F I +E ++ LR W+ ESG+RWG+D D LP T +TW FG R Sbjct: 469 FSLLSIPSIASKFSIDDEAMKLLRLWIVESGVRWGLDQDTQENFNLPVTEWNTWYFGFKR 528 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 MLLGYA+++ G W+++ PY+ S +V L L L WR L L++W+ Sbjct: 529 MLLGYAIKNQNGSWKNIFPYNYISEEYVHVVSGLGEFLEILKKWRNRLNGAYTLQKWMLY 588 Query: 591 CRDMLNAFFL---PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 R+M+N FF + E A+ L++ W I+ G+ Y + V +++LRD+L +L Sbjct: 589 FREMINDFFDFSKLNVEENQALFLLKNCWTNILESGIQLGYINTVTINILRDKLLIQLMN 648 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 ++ + +FL +N C + PM I K++C++G++D +PR F+L+S++ + GD + Sbjct: 649 QKKNYQFLPNAINFCNITPMCFISCKILCIIGIHDNEFPRDRFSYDFNLISKRFRIGDNN 708 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGR-SIQDNSERFPSVLVQELIDYIGQSHYLPGDEA 766 D Y FL A + ++KLY+S+I + + + S+ + ELI+YI Q YL GD+ Sbjct: 709 ICGQDYYAFLLACLLPKEKLYLSFINKLAFCYGNSISSSIFIDELIEYIAQRFYLIGDQN 768 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPG-ERQSYAREWLPAASQA-------GKAHS 818 L+ + R++ +L ++ MPF N+ ++QS+A EWL AA Sbjct: 769 LDIISNIKRIRKYLLYKYSCMPFSCSNFIAYSKKQSFANEWLAAAYADKNITVFTQSQQQ 828 Query: 819 EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRT-EDSEIPDTEPFILEGLSR 877 LP + T+ L L F+ HPVR +FQ RL+V F + + E F + L R Sbjct: 829 FLTTSLPHIIVSTILLRDLYDFYRHPVRMWFQKRLKVYFYQCTHDILLNDETFFVSNLRR 888 Query: 878 YQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP 937 +Q+N +L++ + + + L+R F +G LPYG+FG+++W QC++M +LA ++ Sbjct: 889 FQLNVKLIDYFIHNKNIDTLYREFYDSGMLPYGSFGQLYWIEQCEKMYKLASKIKRYYSS 948 Query: 938 GQ-SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGES 996 ++ I +++ G L VQ +GL+RW+P+ LS+ +WLEHL+YC SGGNGES Sbjct: 949 KIFTLNITFKIETIKLIGELHSVQENGLIRWKPAYLSMRDCFLVWLEHLIYCFSGGNGES 1008 Query: 997 RLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDA 1056 LF D W FP + QA L LI GY G++ PLL+L +SGGAW+ +D N Sbjct: 1009 WLF-GTDSTWHFPNFSKIQAQELLFFLISGYCLGINVPLLLLYKSGGAWINYVFDWNNRV 1067 Query: 1057 MLDDDSTLQKARTKFLQAYEGN-----MMVRGEGDDIWYQRLWR-QLTPETMEAIVEQSQ 1110 + D +KA + + ++G+ E D + ++L L E + I + S+ Sbjct: 1068 ICSDPDIHKKACQRLIYTWQGSSDDTQFSYLRESQDPYLRKLIPLYLNEEDIRIITDVSK 1127 Query: 1111 RFLLPLFRFNQ 1121 +LL L R+ Sbjct: 1128 DYLLDLMRYRI 1138 >UniRef50_Q2SQD5 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQD5_HAHCH Length = 1073 Score = 873 bits (2255), Expect = 0.0, Method: Composition-based stats. Identities = 351/1140 (30%), Positives = 566/1140 (49%), Gaps = 87/1140 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML++Y+SNR + + +P + ++++VQS GM++WL L++ G+AAN+ Sbjct: 1 MLKIYYSNRQEQ-LLALLADALARPKANPLQSDILIVQSQGMSRWLSQQLAEINGVAANL 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLT---- 116 +F LPA IW + ++P+ F+K ++W+LM L P L + +F L YL Sbjct: 60 EFQLPAQLIWRLARLCRDDLPELHPFDKSILTWRLMQLAPGLPDSGEFDALHRYLHTGPD 119 Query: 117 -DDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEY 175 D + +QLS + AD+FD YL+YRPDWL++WE G E AWQ LW+ L Sbjct: 120 RKSPDLLRNYQLSQRIADVFDHYLMYRPDWLSEWEQGLPTEAGASEHAWQIELWRGLTHD 179 Query: 176 THQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIE 235 + HRA + Q L LP R+F+ G+ + P YL LQ +HIE Sbjct: 180 SDAP-----HRARVLQELAAQL---PQHVDKLPPRLFVFGVPYMAPAYLDVLQNAARHIE 231 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 +H+ NP +YWGDI ++++ TR G D Sbjct: 232 VHMYQWNPTEHYWGDIASRKDISRIRTR---------------------DGAEVSGLYDE 270 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV-TPDNLLHNIQSDILELENRAVAGVN 354 G+ LLASWGK RDY+ +L D+ + E D +V P LL +Q+D+ L Sbjct: 271 GHRLLASWGKPLRDYLDVLQDVSVT-EADCYVPPAPPQTLLQRLQADVFNLRQ------- 322 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 + D S+ H+CHS REVE L+D+L+ +L+ D +L+PRDI+VM D Sbjct: 323 -------EPWPESPADDRSLQVHLCHSALREVEALYDQLMDLLQTDHSLSPRDIVVMTPD 375 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 I+ Y+P ++AVFG+ R +P++++D ++++ + L L RF + +VL LL Sbjct: 376 IEQYAPLVEAVFGAQQGARRIPWSLADLSRYSDFNLVQSVLQLFDLLPGRFTASEVLGLL 435 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 ++P + RF + EE L LRQW++E+ IRWG+D ++ + + Q +W+ G+ R+LLG Sbjct: 436 EIPAVGRRFGLDEELLSRLRQWLHEASIRWGLDAESQQAYGVDCADQFSWKAGIKRLLLG 495 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 +A+ A +Q V PY G A+ +G L+ L+ L WR +++ + ++W + Sbjct: 496 FALPDAMQMYQDVAPYPHIQGGDADSLGALSQLIDTLARWRAQISRGQTPQQWADLLHSW 555 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 +N F PD + E A+ + + Q + E A + +PL++++ +L +RLD Q F Sbjct: 556 MNDLFDPDRDEEQALQVAREAVQEWLQETQTAGFDQPLPLAVVKQDLRRRLDSPLRRQSF 615 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 L G V C ++PMRSIPF+VV +LG+N +PR GFDL+++ P++GDR+RR++DR+ Sbjct: 616 LTGAVTFCAMVPMRSIPFRVVAVLGLNHDQFPRHQTQPGFDLIAEYPRKGDRARREEDRF 675 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 LFLEAL++A+ Y+SY+GRSI+DNSE PSV++ EL+D I ++ Sbjct: 676 LFLEALLAARDVFYLSYVGRSIRDNSECAPSVILSELLDTIQ-------------EQGGE 722 Query: 775 RVKAHLTCLHTRMPFDPQNYQP-GERQSYAREWLPAA---SQAGKAHSEFVQPLPFTLPE 830 + H PF P + G SY EWLPA + + + LP E Sbjct: 723 AAIRRILREHPLQPFSPHYFTADGGHFSYQSEWLPALHGRHSKQEYQAFCPESLPPRERE 782 Query: 831 ------TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL 884 V L++L+RF +P R F Q RL + D EPF L GL +Q+ + Sbjct: 783 PFSTDHPVELDSLRRFLRNPTRYFVQQRLNI-LLDASDLAQDREPFDLAGLHGFQVKELW 841 Query: 885 LNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEID 944 L L+ E A G LP GA G I + Q+++ L ++ +EI Sbjct: 842 LQELMNAATDEEAESYLEAKGLLPGGAVGAISRKQTRQQLEALREQARELYGK-DRIEIT 900 Query: 945 LACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYC--ASGGNGESRLFLRK 1002 +G+ + G + + P GLL + S ++ + LWLEHL C + + + Sbjct: 901 PEKSGLPLRGAVAGIGPRGLLHLTTAGCSASRMLLLWLEHLALCGVTADALARPSFLVCR 960 Query: 1003 DGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDS 1062 G + P+A QA L++L++ + + P+ P++ +++T + ++ + Sbjct: 961 QGVGHYRPVAQNQARQLLAELMDLLTQSENEPVRFFPKTSLKYVETKNNPRSRSEPI--- 1017 Query: 1063 TLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS 1122 L + GN GE D + +WR E V ++ P ++ Sbjct: 1018 ------NAALNCWLGNEWQPGELADAHHFLVWRFEAETLNERFVALAESIWEPALEHWEA 1071 >UniRef50_A6VQ90 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VQ90_ACTSZ Length = 1113 Score = 870 bits (2249), Expect = 0.0, Method: Composition-based stats. Identities = 415/1161 (35%), Positives = 609/1161 (52%), Gaps = 101/1161 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 +YHSN LDV ++ ++++ R DPF+ E ILVQS GMAQWLQ+ +++ GIAAN+ Sbjct: 5 FFIYHSNDLDVQAGILISLLQQ-RSTDPFQSETILVQSPGMAQWLQLKIAEADGIAANLR 63 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS-- 119 FP+PASFIW + LP++ ++S F K++M+W LM LL L L Y D + Sbjct: 64 FPMPASFIWQQYADNLPDVSEQSPFGKEAMTWHLMALLAILP----LPRLNEYWRDHALG 119 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL-----------------VEGLGEAQ 162 ++ K +QL+ + ADLFDQYLVYRPDW+ WE G + + + Sbjct: 120 NQEKRYQLARQIADLFDQYLVYRPDWIDAWEKGDDRYIENQLRYALADNPVLLAQIKQDI 179 Query: 163 AWQAPLWKALVEYT--HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 WQ LW+ LV H P HR NL+ ++ TL + P LP R+F+ GISALP Sbjct: 180 RWQGQLWRELVAAVCRHTKDSPARHRVNLHLTYLNTLATG--RPKNLPPRIFVFGISALP 237 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 YL+ LQA+ +H ++HL F NP ++YWGD+ DP ++ +L + R DRE ++ Sbjct: 238 KAYLETLQAISRHSQVHLFFNNPSKHYWGDLADPRFIRELSLKTYREHGSDREANWLSET 297 Query: 281 ENAG------QLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL 334 E + D +G+PLLA+WGKLGRD+ YLLSDL +++E A+ + +L Sbjct: 298 EKVRLKNGEFERSADDELLQIGHPLLATWGKLGRDFFYLLSDL-NAREFTAYTPLEGADL 356 Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 L +++ IL L D S+ H CHSP REVEVLHD LL Sbjct: 357 LTQVKNRILNLVP------------DKQQPLQPPKADRSVVLHACHSPMREVEVLHDYLL 404 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA------------PADRYLPYAISDR 442 + D TLTP+DI+VMVADID Y+P+IQAVFG P +RY+P++ISD Sbjct: 405 RQFQADETLTPKDIVVMVADIDRYTPYIQAVFGQYQRYTEDRIGKKRPDERYIPFSISDG 464 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + ++ +L ++SLL L +S+F +E+VLA LDVP + +F+I L +R WV I Sbjct: 465 KLSENDVLLATYLSLLDLKNSQFSAEEVLAFLDVPAIREKFEIALSDLPQIRHWVARVEI 524 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 R+G+D + + + W+ GL R+LLGYAM +QG WQ L +D+S GL ++VG Sbjct: 525 RFGLD----KNCDSAVKNYNAWQAGLERLLLGYAMRESQGIWQDSLGFDDSDGLKGQVVG 580 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 +LA+ L +L W L Q +E+W +L FF+ D +T I +++ Sbjct: 581 NLAAFLDRLAQWHTFLQQSHSIEKWQQNLTALLTDFFVADEQTVDIQQYIRDAVRSVTEL 640 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + + + ++ + + ++L+ S +FL G V+ CTL+PMRSIPF+VVCLLGMN+ Sbjct: 641 LRSMDFQEDISAEVMAEVMTEKLNDNPNSLKFLVGKVSFCTLLPMRSIPFRVVCLLGMNE 700 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 YPR+ P FDLM ++GDRSRRDDDRYLFLEAL++AQ++LYISY+GRSI DN R Sbjct: 701 NDYPRRRTPNSFDLMRYHRRKGDRSRRDDDRYLFLEALLAAQEQLYISYVGRSITDNQPR 760 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 PSV+V +L DYI + +H F PQN+ +R ++ Sbjct: 761 QPSVVVSQLQDYINDNLA-------------DNALRLTEKVHPMTIFSPQNFYGNDR-TF 806 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 A+EWLP++ ++ + L+ L +F HPV+ FF+ +L V F+ +D Sbjct: 807 AKEWLPSSPAMPSGENKQAVLPLTEKLTRIELDQLVKFVRHPVKYFFENQLGVYFQNDDD 866 Query: 863 EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQ 922 IPDTE F L+GL Y+I L ++ R F R G LP G FG+++ Sbjct: 867 LIPDTENFTLDGLDLYRIKDDFLTY--SDEELCRYFERLSVKGILPRGNFGKVYEAKVRS 924 Query: 923 EMQQLADRVI-ACRQPGQSMEIDLACNGVQITGWLPQVQPD----GLLRWRPSLLSVAQG 977 EM+ ++V Q Q+ I+L +GV+ITG L + D + WR LS G Sbjct: 925 EMETFREKVRDYLLQTPQTQAIELDIDGVKITGNLTALYGDSPDKRRIAWRVGNLSDGFG 984 Query: 978 MQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLV 1037 ++ W+ HL CA+G S L + +D +AAE+A L + Y M+ + Sbjct: 985 LENWVYHLAKCATGE-VTSSLMITRDKSVTLAAIAAERATAQLGVYVRAYLCAMNRIQCI 1043 Query: 1038 LPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQL 1097 A LK + + R A RG D +++RL L Sbjct: 1044 PTMKITALLKCR-------------SADELRRLLDNAARPTDYNRG---DPYWRRLLLNL 1087 Query: 1098 TPETMEAIVEQSQRFLLPLFR 1118 + ++ + L Sbjct: 1088 DDGELTDVLPTLTDWFAMLVD 1108 >UniRef50_B8FB93 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FB93_DESAA Length = 1085 Score = 869 bits (2246), Expect = 0.0, Method: Composition-based stats. Identities = 331/1131 (29%), Positives = 544/1131 (48%), Gaps = 81/1131 (7%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 LRVY SN L L + ++ ++ L P E E++L Q+ M +WL + L++ G AN+ Sbjct: 15 LRVYSSNSLQTLARQLADLLVKDPLP-PLEQEIVLTQNPVMGRWLYLELAKINGACANLR 73 Query: 62 FPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 LP +++ ++F V+P E ++S F+ +M+W++M L + +E FT ++ YL DD Sbjct: 74 VTLPNAYMHELFASVIPPMENEEQSPFSPWAMTWRIMDALARFMEEPPFTEIQRYLQDDP 133 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 D RK F LS + A +FD Y+++RP+ + W+ G WQA LW+ + + Sbjct: 134 DGRKQFGLSRRIAGVFDGYMLFRPEMILNWDHGKGG-------HWQAILWREISQ----- 181 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 G HR L F + L S + P LP R+ + G+ +PP +L +G+ + ++L Sbjct: 182 GFNDRHRPGLRTDFFKALRSGKSRPGVLPKRISLFGVWGMPPFHLDVFSGVGRMLPVYLF 241 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 NPC+ YW + ++ TR + + + GN L Sbjct: 242 HVNPCKEYWAHAFSDKQITRITTR-------------------SPFTRPEELYLEKGNAL 282 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 LAS G +GRD++ L++ L+ + + LL IQ +ILE + E+ Sbjct: 283 LASLGGVGRDFLGLVAGLD-CHPQELYESPDRTALLGMIQGEILEFKE--------EDGR 333 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 ++ K P D S+ H CHSP RE+EVL+D +L L+EDP L P+DI+VM D+D ++ Sbjct: 334 KTQEKARPLPGDRSLAIHNCHSPMREMEVLYDHILKFLDEDPDLDPQDIMVMAPDMDKFA 393 Query: 420 PFIQAVFGSA-PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 P+++AVF S P LPY I+ + R P + AF+ + L SRF + VL L +P Sbjct: 394 PYVEAVFASPGPGGIRLPYCIAHKEVRTVSPSVNAFLEIFDLCQSRFEAAAVLDLAGLPA 453 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 +A +F +E+ L L +W+ ++ +RWG + D+ + L LPATG +TW GL R++LGYAM Sbjct: 454 VAEKFGFSEQDLETLARWIAQTRVRWGANADSRKALGLPATGDNTWESGLDRLMLGYAMA 513 Query: 539 S-AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + +Q++ P+ + + A L+G A L R L + ++EW+ + ++ Sbjct: 514 GLDEEFFQNISPFGDLAMEDAPLLGRFAEFTEALFQLSRKLEKSHEIQEWVKILEGVVQE 573 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 F PDAE + + YG V ++++ +A L+Q S L Sbjct: 574 FLSPDAEDLHLLQI---ALSKTAKAQSEQGYGREVAAAVVKAAVAGLLEQSSPSGSILRR 630 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 VN C++ IP KV+CL+GM+DG +PRQ +GFD M++ P+RGDRS R DDR+ FL Sbjct: 631 GVNFCSIAQGAGIPAKVICLVGMDDGAFPRQDGGMGFDYMARSPRRGDRSPRGDDRFSFL 690 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 +A+I+AQ +L+IS+ G+ IQDN+ PS LV ELIDY+ L Sbjct: 691 QAIINAQSRLHISFTGQGIQDNAALCPSPLVSELIDYVEAGFDLSDSGP----------- 739 Query: 778 AHLTCLHTRMPFDPQNYQP--GERQSYAREWLPAA----SQAGKAHSEFVQPL--PFTLP 829 L +H PF P + S++R++ AA ++ F QPL P Sbjct: 740 --LVVVHKLQPFSPDYFSGQCPGLFSFSRQYSQAADILQRGEKQSRQFFSQPLEEPEAQD 797 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV 889 +++ LE L F+ P ++ + R+ V + E F L GL R+ + +++ V Sbjct: 798 KSISLEALCAFFRMPPKSILRDRVGVFLDAYTEAMDSAEAFSLGGLERHVLAGKMVEKRV 857 Query: 890 EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG-QSMEIDLACN 948 + + L+ +A G+LP+G G + ++ A + A Q ++ D+ Sbjct: 858 QGRSSLDLYALAKAQGELPHGNVGAFAFNQLENQISPFARKAEAMLSEANQRLDADVMAG 917 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGE-SRLFLRKDGEWR 1007 +I G L + P GL+ +R + + W+ HL CA E LF D + Sbjct: 918 EWKIHGRLSPLGPWGLILYRTASAKAYDRLNAWIRHLFLCAVRPGFENKSLFAGTDAVYY 977 Query: 1008 FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKA 1067 + + A+ L+ L E Y +GM P PE+ A+ ++ + + +A Sbjct: 978 YDNVKQNAAVTRLAALAEVYDKGMEFPAPFFPETSFAYAQSMFKTDDVG---------QA 1028 Query: 1068 RTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 + + RGE D + + L P + + P+ Sbjct: 1029 MKAARNKWGPDFYGRGEALDSYAALCFEGLDP-LSREFRDLAVEVYAPMLE 1078 >UniRef50_C5S7Q0 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7Q0_CHRVI Length = 1200 Score = 865 bits (2236), Expect = 0.0, Method: Composition-based stats. Identities = 392/1217 (32%), Positives = 568/1217 (46%), Gaps = 140/1217 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-------- 53 + NRL+ L L+ + R L P E E ILVQS G+AQWL++ L+ Sbjct: 16 FMLIQGNRLEELRGLLVAWMHRHPLA-PLENETILVQSNGIAQWLKLALAATPTSDDRDA 74 Query: 54 ----FGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLER---- 105 GIAA +D LPA FIW ++ VL ++P+ S F+K ++W+L LL +L Sbjct: 75 ITGGQGIAAALDVMLPARFIWRVYRAVLGDLPETSPFDKAPLTWRLYRLLERLTGVAPLQ 134 Query: 106 ------EDFTLLRHYLTDDSDK---RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVE 156 + LR +L D + R+ +QL+ + ADLFDQY VYR DWL W G V Sbjct: 135 SSDTRFDALDPLRGFLAVDGQEAAPRRRYQLAERLADLFDQYQVYRADWLEAWSQGRDVL 194 Query: 157 GLGEAQA--------WQAPLWKALVEYTH------QLGQPRWHRANLYQRFIETLESATT 202 + WQ LW+AL RA +++ F+E + Sbjct: 195 IRPNGERRSIPVGQDWQPVLWRALQADVDAEHGPDDPPLRHASRAEVHRVFLERTRAGQD 254 Query: 203 CPP---------GLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKD 253 P LP RV + G+S+LP L+AL+A+ ++ L NPCR+YWGDI + Sbjct: 255 ADPTRIAALRSVELPRRVIVFGLSSLPRQMLEALEAIAPVCQVMLFVLNPCRHYWGDIIE 314 Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 L + R++ + + + G+PLLA+WGK GRDYI L Sbjct: 315 GRDLFRHPYRRQT-------------ARKVPENLDESRLHLNGHPLLAAWGKQGRDYIRL 361 Query: 314 LSDLESSQE--------------LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 L + + + +D F +LLH +Q DILEL Sbjct: 362 LDEQDERRRYEAYFQGLTARDQGIDLFASPGTGSLLHQLQDDILELRPLHERQDQRTVID 421 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE----DPTLTPRDIIVMVADI 415 D S+ F V HSPQRE+E+LHDRLL E D L PR+++VMV DI Sbjct: 422 --------PEHDRSLEFIVAHSPQREIEILHDRLLDAFERSARTDRPLQPREVLVMVPDI 473 Query: 416 DSYSPFIQAVFGSAP--ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 ++P IQAVFG R +P+ I+D+ R +P++ LL+LP +RF ++L L Sbjct: 474 AVHAPHIQAVFGRFDPDDRRAIPFQITDQGQRHRNPLVIGLEHLLNLPRARFAVSELLDL 533 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA-TGQHTWRFGLTRML 532 LD+P L RF + E L LR W+ + +RWG+D L LP Q+TWRFGL R+L Sbjct: 534 LDIPALRTRFSLDEPDLPRLRLWIAGANVRWGLDAAQRASLGLPEGLEQNTWRFGLRRLL 593 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 LG+A A G W+ + P+DE GL A L+G LA LL +L + + L + R W + Sbjct: 594 LGFASGDA-GPWRDIEPHDEVGGLEAALLGPLAQLLERLEAYWQCLTEPRTPAGWSALIS 652 Query: 593 DMLNAFFLPDAETEA-AMTLIEQQWQAIIAEGLGAQ-YGDAVPLSLLRDELAQRLDQERI 650 +L+ FF+ +E++ + I + A A+ + + + L ++RD L RLD+ + Sbjct: 653 ALLDDFFMETSESDGVTLARILLELDAWEADCVQGGLGAEPIALEIVRDSLLARLDRPSL 712 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 +QRFL G VN TLMPMR+IPF+ + LLGMNDG YPR+ P FDLM+ + GDRSRR+ Sbjct: 713 TQRFLGGAVNFATLMPMRAIPFRQIWLLGMNDGDYPRRRVPADFDLMAGDYRPGDRSRRE 772 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 DDRYLFLEAL+SA++KL I ++GR I+DNSER PSVLV +L D++ P Sbjct: 773 DDRYLFLEALLSAREKLVIGWVGRGIRDNSERPPSVLVGQLRDHLAAGWRRPDG------ 826 Query: 771 ESEARVKAHLTCLHTRMPFDPQNYQPGE---RQSYAREWLPAASQAGKAHSEFVQPLPFT 827 AR+ A LT +H PF ++PG +YAREW AG + P+ Sbjct: 827 -DGARLLAALTSVHPLQPFGRGYFEPGRAKTLFTYAREWRAVHDGAGTTEVSAERLAPWL 885 Query: 828 LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNA 887 V L+ LQ F P+ A F RL++ E PD E F L+GL +QI +L++ Sbjct: 886 PETPVDLDQLQGFLRDPIMALFDQRLRIKAPGEVVAPPDVETFALDGLGDWQIKDELISR 945 Query: 888 LVE--------QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ 939 E + + RF+A G LP G+ GE T + L A Sbjct: 946 TFEPGLDRPALEQRLQAGIARFQAQGRLPDGSLGERLGRTVIAYLPVLHAAWDAALSEWP 1005 Query: 940 S---------MEIDLACNGVQITGWLPQVQP-----DGLLRWRPSLLSVAQG-----MQL 980 +E+++ + + L ++ ++ L ++ Sbjct: 1006 RRLDRPIPVMVEVNVPAGRLVLEDVLSDLREGDDGRGQIILQTSGLTKDKHYQWRNTLRA 1065 Query: 981 WLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPE 1040 W+ HL G +RL G+ R P+ ++A L L+ + EGM PL V Sbjct: 1066 WVRHLAAQLDGEPVTTRLL-TPSGDARLEPVPVDEARERLEALLVVWWEGMQRPLPVALN 1124 Query: 1041 SGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPE 1100 +G AWL D KA LQA++ + + + R + Sbjct: 1125 AGMAWLDK--DGPETLEDGTAPEELKAWNAALQAFDLDHTY-----NAYVGRCYDSFEAL 1177 Query: 1101 TME-AIVEQSQRFLLPL 1116 + R L Sbjct: 1178 WSGVEFARWAHRLYGGL 1194 >UniRef50_B0BTG3 Exodeoxyribonuclease V, gamma subunit n=8 Tax=Pasteurellaceae RepID=B0BTG3_ACTPJ Length = 1114 Score = 862 bits (2226), Expect = 0.0, Method: Composition-based stats. Identities = 382/1156 (33%), Positives = 598/1156 (51%), Gaps = 92/1156 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M V+ S +L L AL+ + + + +PFEPE +LVQS GMAQWLQM ++ + G+AA+ Sbjct: 1 MFTVFFSQKLSSLAALLIRLQQNDPNPNPFEPETVLVQSVGMAQWLQMQIADQTGVAAHY 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FP P SF+W + + PE+PKE+ F ++S++W+LM L+P+ LE+ +F L YL D+ Sbjct: 61 QFPFPTSFLWQQYRVLFPELPKENIFERESVTWRLMRLIPKYLEKAEFESLNLYLNKDAR 120 Query: 121 K--RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGE-----------------A 161 + KL+QL+ K ADLFDQYLVYRP WL WE+ + L E Sbjct: 121 QYPLKLYQLAGKIADLFDQYLVYRPHWLVHWESNRIEAVLNEILAAIAFREKNERDILAN 180 Query: 162 QAWQAPLWKALVEYTHQLGQPR----WHRANLYQRFIETLESATT-CPPGLPSRVFICGI 216 WQ+ LW AL+E HRA L Q++ E L++ T LP R+F+ GI Sbjct: 181 LRWQSMLWNALIEDIKADSDEEVFMTSHRAYLQQQYFEKLDNLTESEKSKLPKRIFVFGI 240 Query: 217 SALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL 276 S+LP L L+ L +H E++L F +P + YW + + L KL +++ Sbjct: 241 SSLPATQLAVLKKLSEHCEVYLFFLDPSQEYWAESVEDKTLEKLALKRQLSQQ------- 293 Query: 277 FRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 + GN LLA WGK GR+++ L + E ++ F + D+ L Sbjct: 294 ----------DLDALLAEQGNQLLAMWGKQGREFLVQLVEQEPDNTIEVFDEYEGDSNLI 343 Query: 337 NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 +++ IL ++ + L D SI H CHS REVEVLH++LL M Sbjct: 344 KLKNAILN--------------FNNEQRFGLAEQDRSIQIHACHSVMREVEVLHNQLLQM 389 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP--ADRYLPYAISDRRARQSHPVLEAF 454 E +PTL P+DIIVM ADID Y+P+I AVF RY+P+ +SD++ P++ +F Sbjct: 390 FERNPTLAPKDIIVMSADIDKYAPYINAVFARYEKGDKRYIPFTLSDQKVTAVDPIIASF 449 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 + LL+L +S F +E +L LLDV L RF++ E+ L+ LR WVN+ GIR+G+ Sbjct: 450 LMLLNLKESDFSAESLLDLLDVKALRERFNLQEQDLQTLRHWVNQVGIRFGLHIQQ---- 505 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 + W GLTR+LLG ++++ G WQ + ++ES GL A LVG LA + L W Sbjct: 506 -DDWQNHNAWENGLTRLLLGTSLKAESGIWQDSIAFNESYGLSATLVGFLAKFIENLTAW 564 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 + Q+ LEEW + ++ F+ E+ A+ L+ + + + A++ +++ + Sbjct: 565 YEFIQQDHTLEEWKARIQKLIGEFYQESNESLDALLLLNSTLEEVANKAEQAEFSESIGI 624 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 ++R L +L+Q++ S +FLAG VN CTL+PMR+IPFKVVCLLGMN+ +PRQ + F Sbjct: 625 EIIRLLLEDKLNQQQSSLQFLAGKVNFCTLLPMRAIPFKVVCLLGMNEADFPRQHSVNSF 684 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 DLM PKRGDR+RRDDDRYLFLEAL+SAQ+ Y+SYIG+S DN +R PSVLV +L+DY Sbjct: 685 DLMQYAPKRGDRARRDDDRYLFLEALLSAQEIFYLSYIGQSTTDNKQRLPSVLVSQLLDY 744 Query: 755 IGQSHYLPGDEALNCDESEARVK--AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 + + + +S + + F P+N+ P + SY +EWL Q Sbjct: 745 LAEHLTEQARLQASEKDSFSEALFWQKMVVQQPLTVFSPKNFTP-QYGSYDKEWL--LEQ 801 Query: 813 AGKAHSEFVQP---LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 + ++F+ L +P + LE L F ++P++ FF +L V FR ++ I ++E Sbjct: 802 QHEPLADFLNKSFDLKAEIPTEINLEDLIAFVSNPIKYFFNHQLGVYFRNDEESIAESEK 861 Query: 870 FILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 F L L YQ+ QL+ +E + E F++ + G+LP F ++ + + +L + Sbjct: 862 FSLSDLDDYQLRDQLVT--LEPAEREAFFKQEQLKGNLPIANFAKVSLQDLDDSINELRE 919 Query: 930 RVIACRQPGQSMEIDLACN----GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL 985 ++ +EI+ +++ G + D ++ W+ S L ++LW+ +L Sbjct: 920 LILPYLGESDILEIERLFEVEQLKIRLFGNIRNKFADEIVFWKVSSLKDKDYIRLWIYYL 979 Query: 986 VYCASGGNGESRLFLRKDGE---WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESG 1042 + A G N E R + +RF ++AEQA L I Y L Sbjct: 980 LIQAQGLNLELTAIARSKEKAEIFRFNQVSAEQAFSQLQTYISAYVTSFRQ----LTWGI 1035 Query: 1043 GAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETM 1102 L ++ +D + Q+ + Y + + QR+ +Q + Sbjct: 1036 WTDLDNYFEKLSDKQNVAEYCQQQLSALMDKQYF---------EKSYLQRVLQQSSQLDY 1086 Query: 1103 EAIVEQSQRFLLPLFR 1118 I + + + + Sbjct: 1087 AQIHTVTLEWFELMQQ 1102 >UniRef50_Q0VNI2 Exodeoxyribonuclease V gamma chain n=3 Tax=Gammaproteobacteria RepID=Q0VNI2_ALCBS Length = 1138 Score = 861 bits (2225), Expect = 0.0, Method: Composition-based stats. Identities = 406/1183 (34%), Positives = 564/1183 (47%), Gaps = 120/1183 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L V H NRL+ L L+ ++RE L P E E LVQS GMAQWL++ L+ GI+A Sbjct: 5 LMVLHGNRLETLTELVADWLQREPLS-PLETETFLVQSNGMAQWLKLQLADALGISAGFQ 63 Query: 62 FPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 F +PA F+W + VL E +P+ S F+K + W+L LLP LL E F LRH+L DD Sbjct: 64 FQMPARFLWGAYRTVLGEDQVPRTSPFDKSRLLWRLYRLLPTLLNSEHFGPLRHFLADDV 123 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL----------VEGLGEAQAWQAPLW 169 D RK QL+ + ADLFD Y +YR DWL WE G+ + +Q WQA LW Sbjct: 124 DGRKRHQLAERLADLFDAYQMYRADWLDDWENGNDRLRKTQDRDTFDDFPASQLWQAHLW 183 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETL---ESATTCPPGLPSRVFICGISALPPVYLQA 226 +AL+ Q R+ +++ F+ L + T PP LP R+ I GISALP L+A Sbjct: 184 RALLADMDDSKQG-LSRSAIHRDFMAALTQQQEQGTPPPRLPRRLIIFGISALPQQALEA 242 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 L AL +H +I +L NPC++YW DI + L + R+ Sbjct: 243 LAALSQHCQILMLVQNPCQHYWADIVEDKQLLRRQLDNRKRHLTALPENRV--------- 293 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE 346 NPLLA+WGK GRD+I LL D + PD+ Q+ I E Sbjct: 294 ----------NPLLAAWGKQGRDFIGLLYDHD-----------DPDSYRSAFQNQIDLFE 332 Query: 347 NRAVA--------GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 NR + E N+R +DSS+ F + HS QREVE+L D LL Sbjct: 333 NREPHTLLQQLQQDILDLEPLPEPNRRLPLEMDSSLQFRIGHSAQREVEILQDELLDRFS 392 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSA--PADRYLPYAISDRRARQSHPVLEAFIS 456 DPTL PRD+IVMV DI++Y+P I AVFG RYLPY +SDR A + P+ +A S Sbjct: 393 NDPTLQPRDVIVMVPDIEAYAPHIDAVFGRLERDDPRYLPYTLSDRSAGAASPLAQAVES 452 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 LL LP RF + D+L LLDVP + RF I E L L +W++++ IRWG++ + L++ Sbjct: 453 LLHLPQWRFTATDILDLLDVPAVRERFGIDEGDLPQLARWIDQARIRWGLNSPQRKTLDV 512 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 P Q++W FGL RML GY + W + P DE +GL AEL G L+ LL L + Sbjct: 513 PGFEQNSWAFGLKRMLAGYLLGDGPA-WMGIEPLDEVAGLGAELAGRLSRLLDTLEQHWQ 571 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL-IEQQWQAIIAEGLGAQYGDAVPLS 635 + +W +L+ F P E + + + +A A + +PL+ Sbjct: 572 QSRTDASARQWQQRFTQLLDDLFAPVDEADQTLDAGLRDALNDWLAACAEADFDSLLPLT 631 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 + R L L+ E +SQRF+AG +NICTLMPMR+IPF+ VCLLGM DG YPRQ P+ FD Sbjct: 632 VARRPLLDALNAESMSQRFMAGRINICTLMPMRAIPFRHVCLLGMKDGDYPRQQQPMDFD 691 Query: 696 LMSQ--KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 LM Q + GDRSRRDDDRYLFLEAL+SA+ LYIS+ GR+++DNSER PSVLV +L D Sbjct: 692 LMRQWGNYRPGDRSRRDDDRYLFLEALLSARDSLYISWTGRNVRDNSERPPSVLVAQLRD 751 Query: 754 YIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY------------QPGERQS 801 +I Q + E ++ LT H PF + + + Sbjct: 752 HINQRWHTDQGEPVD----------ALTVSHPLQPFSARYFYSANDASAANNADAHILHT 801 Query: 802 YAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 YA EW + P E + L RF PV FF+ RL+ + + Sbjct: 802 YANEWRALHEEQTHRVDNDQPLPPLENNEPISCAALGRFLKQPVAHFFEQRLKARLKQQR 861 Query: 862 SEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER------LFRRFRAAGDLPYGAFGEI 915 + D+EPF +GL R+Q+ QLLN + R +GDLP F E Sbjct: 862 QVLDDSEPFSFDGLQRFQLQDQLLNEALRAGPEHANDAMRVAMDRLAGSGDLPLAPFDEG 921 Query: 916 FWETQCQEMQQLADRVIACRQPGQSM----EIDLACNGVQITGWLPQVQPD----GLLRW 967 ++ + Q + ++ EI L +QI WL ++ L Sbjct: 922 NRDSLLLPLAQPLEHYFTLLADSGTLQPQQEIRLTAGPLQIEDWLTDLRGSSANAQRLVL 981 Query: 968 RPSLLSVA--QGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIE 1025 L + + W HL CA+G + +DG + P + A L QL Sbjct: 982 HTGKLKERFDKLTRDWTLHLAACAAG-LPLTTHIQGQDGRFSLPHIHRSDAQQCLDQLGY 1040 Query: 1026 GYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEG 1085 +++ + PL V + AWLK + + +E M GE Sbjct: 1041 AWQKALCEPLPVACATAFAWLK-------------GEEKDNGENEARKVFESGFMHTGEQ 1087 Query: 1086 D-DIWYQRLWRQLTPET------MEAIVEQSQRFLLPLFRFNQ 1121 + + R W A +++ PL++ Q Sbjct: 1088 EKEPAIARAWADFDTLLAASHGDANAFEYWTEQLYAPLYQHAQ 1130 >UniRef50_A4VRQ6 Exodeoxyribonuclease V gamma chain n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VRQ6_PSEU5 Length = 1092 Score = 860 bits (2223), Expect = 0.0, Method: Composition-based stats. Identities = 382/1141 (33%), Positives = 565/1141 (49%), Gaps = 84/1141 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +YH+ L+ L + + + L DPF P ++V S GM +WL + L+++ GIA + Sbjct: 1 MLSLYHAPDLETLGE-LATTLLAQPLADPFAPARVVVPSQGMGRWLTLELARRQGIAMQL 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 + LPA+F+WD+ VL +P++SAF+ +++W+L L + E L YL D D Sbjct: 60 ELQLPAAFVWDLSRTVLGSLPEQSAFSPTTLTWRLYGWLCEPANLELAPRLAQYL-DGGD 118 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 +R+ L++K AD+FDQYL+YR DWLA WE G ++ LG +AWQA LW+ L + H Sbjct: 119 ERRRLSLAAKIADVFDQYLLYRDDWLAAWERGETLD-LGPDEAWQALLWRELTKDGHP-- 175 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 HRA L ++ L P LP R+ + GIS+LPP +L+ L L +HI++ + Sbjct: 176 ----HRARLLGDLLQRLYR-DEPLPDLPERLLVFGISSLPPHHLRVLDGLARHIDVVVCA 230 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NP R WG+I+D LA+ + D DVG+PLL Sbjct: 231 LNPSREAWGEIRDIRELARQ-----------------------PESGVDDWYLDVGHPLL 267 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAF------VDVTPDNLLHNIQSDILELENRAVAGVN 354 AS GK GRD+ L L +S+ F D+ D+LLH +Q+DIL L R Sbjct: 268 ASLGKQGRDFFDSLFSLTASEGSQEFGLYSEDEDLHDDSLLHALQNDILRLRTRLP---- 323 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 D + L D S+ H+ HSP REVE+LHD+LLA DP LTP ++V+ D Sbjct: 324 -------DERISLAENDRSLEVHIAHSPLREVEILHDQLLARFAADPALTPDQVVVLTPD 376 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 I+ Y+PFI+AVF +PY+++DR R P++EAF+ LL L SRF +E++LA L Sbjct: 377 IERYAPFIEAVFAPREGSPRIPYSLADRSLRAEVPLIEAFLELLLLAQSRFAAEEILAWL 436 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + P +A R I E L LR W+ E+G+RWG D + L LPA TWR GL R+LLG Sbjct: 437 EQPAIARRAGIESEDLPLLRDWLREAGVRWGRDGEQRARLGLPAEPAFTWRQGLDRLLLG 496 Query: 535 YAME-----SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 +A P D G +L+G L + +L LA+ RPL EW Sbjct: 497 FAAPPQLAGDRAPLLGEHWPLDALEGARGQLLGRLVGFVERLGSLADQLARPRPLAEWAD 556 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 + +++ F + E + L+ Q A+ + A + L L+ +L+ L Q Sbjct: 557 DLQVLIDTLFD-EREAGETLLLLSQACAALRDQAQAADLTRPIELELVHQQLSAALQQGG 615 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 + FL G V CT++PMRS+PF+VVCLLG++DG +PR+ P GFDL+ + P+RGDR+RR Sbjct: 616 GASGFLTGAVTFCTMVPMRSLPFRVVCLLGLDDGAFPRRTPPSGFDLIGRHPRRGDRARR 675 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 DDRYL LE L+SA+Q LY+SY+GR +DN+ PSVL+ E+++ + + L Sbjct: 676 LDDRYLLLETLLSARQALYLSYVGRDPRDNAVLPPSVLLSEVLEAVDMTAVLA------- 728 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP 829 + V + H PF P+N+ Y+ W AA + + QP L Sbjct: 729 -DGARPVSQKILIAHPLQPFSPRNFGEAPCAGYSLPWFRAAQRLAEPPQAQAQPFASLLA 787 Query: 830 ET------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 E + L + + HP R + RL + + + EPF LE + + + Sbjct: 788 EPDEAWLTIEPSQLLQCFRHPARFLLEQRLGLRLADDQESLASDEPFDLEMPAWNGLRRL 847 Query: 884 LLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP--GQSM 941 L A+ ++ E R AAG LP G G+ W ++ A R+ R + + Sbjct: 848 SLQAMEQRWSDEEERRMACAAGWLPTGELGQALWGKLRGPVRAFAPRLFELRPDAVPEPL 907 Query: 942 EIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV--YCASGGNGESRLF 999 +D+ GV++ GWL V P GL W+ L WL HL+ CA+ G L Sbjct: 908 PVDINLAGVRVHGWLDGVTPGGLFGWKLGRLGEWDLPPFWLRHLLLNLCATPGIERHSLM 967 Query: 1000 LRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLD 1059 L G+W+ PLA A L + YR + PL +LP S A+ + + Sbjct: 968 LSPAGDWQLGPLA--NAAELLEPWLVAYRSAIREPLPLLPRSSQAFARGYRKPSRGS--- 1022 Query: 1060 DDSTLQKARTKFLQAYEGNMMVR--GEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLF 1117 L AR + +A+ G E +D W +R P E +++ + P Sbjct: 1023 --EPLDCARKRAREAWFGAEFSPIAAEAEDPWNALAFRDSDP-LDERFETLAEQLIGPAL 1079 Query: 1118 R 1118 Sbjct: 1080 D 1080 >UniRef50_Q1N2R1 Exonuclease V gamma subunit n=1 Tax=Bermanella marisrubri RepID=Q1N2R1_9GAMM Length = 1101 Score = 859 bits (2219), Expect = 0.0, Method: Composition-based stats. Identities = 355/1153 (30%), Positives = 550/1153 (47%), Gaps = 101/1153 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML VY SNR++ L + +V + P +P+ I+V++ G+A WL+M L+Q GIAANI Sbjct: 1 MLNVYQSNRMEGLLGQLIKLVLQSD-SSPLQPKTIVVENPGLAHWLKMQLAQTLGIAANI 59 Query: 61 DFPLPASFIWDMFVRVLPEIPK----ESAFNKQSMSWKLMTLLPQ--LLEREDFTLLRHY 114 FP+P+ F W + ++ + + ES FNK ++W + +L + +L+R F LL Y Sbjct: 60 QFPMPSRFFWQLQRDLVSDSQEAWQTESIFNKDPLTWFVFDVLSESQILQRPGFELLADY 119 Query: 115 LTDDSDK-RKLFQLSSKAADLFDQYLVYRPDWLAQWETG--HLVEGLGEAQAWQAPLWKA 171 + D D+ +L+QLS++ AD++DQYLVYRPDW+ WE + E WQA LW+ Sbjct: 120 VKDSDDESLRLYQLSTRIADIYDQYLVYRPDWIKSWEQQTFAIDGQPLEEARWQAELWQI 179 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 L + G P HRA+L + F+ L++A + LP V G S LP +++L L Sbjct: 180 LRQEAISRGFPLHHRASLTEDFLHLLQTAESIES-LPKDVIFFGFSTLPKNQIESLALLS 238 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 H ++HLL NP + YWGDI D A+L R + D Sbjct: 239 SHCDVHLLTPNPSQTYWGDILDERLQARLRLRGKSVPMAD-------------------- 278 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 GN LLAS G++G++Y LL DL+ +E D FVD +LL IQ+ IL L+ + Sbjct: 279 ---SGNALLASLGRMGQEYQRLLLDLDVYEEHDLFVDADDQSLLGRIQNQILHLQQSSSQ 335 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 ++P D SI CHS REVEVLHD L L + + P+DI+VM Sbjct: 336 ------------PEHIEPNDDSIKIVGCHSAMREVEVLHDH-LLDLLQQSDVDPQDIVVM 382 Query: 412 VADIDSYSPFIQAVF-----GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 + D+ Y+P+I AVF +PY+ISDR ++ HP++ FI LL++P SR Sbjct: 383 IPDVARYAPYIDAVFQGGVDNRQGDRVRIPYSISDRPIQEEHPLINGFIQLLNMPKSRMS 442 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 +V+ALL++P + +FD+ E+ L ++QW+ + IRWG D+ + + LP Q+TW Sbjct: 443 YSEVIALLEIPAVYRKFDLDEKQLHQVKQWLELAAIRWGYDETHRSKQGLPKWQQNTWLH 502 Query: 527 GLTRMLLGYAMESA----QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 G R+L+GYA + P + GL A +G + + + +L + Sbjct: 503 GFQRLLMGYAFSERLAPNDELPFDISPVENVEGLEAASLGPVMNFVNELYEFVLATENLH 562 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 EW +D L FF E + + I Q + + + +P S++ + Sbjct: 563 SCTEWRYFLQDSLQRFFDVTTEEQPVLEQIHQVLENWLQTSQYVNFSHDIPFSVVYQGVQ 622 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 Q L + SQ F+ G VN CTL+PMRSIPFK V +LG+ND YPR + DLM + Sbjct: 623 QGLQKNNGSQHFMIGRVNFCTLLPMRSIPFKYVAVLGLNDQEYPRTVPGNSLDLMRFNRR 682 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 GDR+RRD+DRYLFLEA++SA+Q L++SY + N+ PSV++ E +DY+ + + Sbjct: 683 VGDRNRRDEDRYLFLEAILSARQGLWLSYRSLDQKQNTPMTPSVVLAEFMDYLDINFF-- 740 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG-ERQSYAREWLPA------------ 809 E+ L H F+ Q + G + SY W + Sbjct: 741 --------SGESAASQILFTQHPLQAFNRQYFIAGSKLHSYQTNWFKSIYQLQSDANQTF 792 Query: 810 ASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 + GK+ + V L TL RF+ P RAF +L + F D EP Sbjct: 793 QEEKGKSSVPVLSQPNGINMLEVGLSTLVRFFQLPARAFLNQQLNIQFHNLADMHEDEEP 852 Query: 870 FILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 F L GL RY +L ++ + R LP+G GE W+ Q ++ + Sbjct: 853 FELSGLDRYAAKDYILQQTIQGRSIDPR----RLQPWLPFGKIGERHWQRTRQSVEDVLA 908 Query: 930 RVIACRQPGQ--SMEIDLACN-----GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWL 982 + + +EI+LAC + GW+ +V L+ + + ++L + Sbjct: 909 EATSMGLENKEGPLEINLACEYQNGQNTSLVGWINEVYQGRLVLLKVAKFQAKHLIELLI 968 Query: 983 EHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESG 1042 E A G S + +D P++A +A YL++L+ Y + PL +PE+ Sbjct: 969 ESAALNAQG-YNYSGCLVTQDIRINVKPMSASEAKSYLNKLLSYYFSHQNQPLNFMPETA 1027 Query: 1043 GAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETM 1102 A + D QKA +F++ + + E D Y R + ++ Sbjct: 1028 WALY--------NPTTKQDLRSQKALQRFVEVNDYSYYDP-ERLDPHYHRCFGNVS-ILP 1077 Query: 1103 EAIVEQSQRFLLP 1115 E ++E + P Sbjct: 1078 EQLIEVAHDLFEP 1090 >UniRef50_C1D6T7 RecC n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6T7_LARHH Length = 1159 Score = 858 bits (2216), Expect = 0.0, Method: Composition-based stats. Identities = 398/1194 (33%), Positives = 547/1194 (45%), Gaps = 129/1194 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-FGIAANI 60 + H+NR ++L ++ + R+ L P + E+ LVQS GMAQWL+ L++ GIAA + Sbjct: 7 FTILHANRAEMLRDVILAWLARDPLSSPLDDEVFLVQSQGMAQWLKHALAESPAGIAAAL 66 Query: 61 DFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 DF LP F+W + VL E +P +S F+K +SW+L LP L F L ++ D Sbjct: 67 DFQLPQGFLWRCYRAVLGEDSVPAQSPFDKAPLSWRLYRELPAWLHEPVFAPLARFVEAD 126 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV-------EGLGEAQAWQAPLWKA 171 +D R+L+QL+ + ADL+DQY YR DWL WE GH L E + WQA LW+ Sbjct: 127 ADPRRLYQLAHQLADLYDQYQSYRADWLTGWENGHDDITRHGRPAPLPEGERWQAELWRR 186 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 L HRA ++QRF+ L T P LP RV + G+SALP L+AL A+ Sbjct: 187 LAGQL--ASARHTHRAAVHQRFVAALREGTPPPGSLPERVVVFGLSALPQQTLEALDAIS 244 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 +H + + NPCRYYWGDI + + QR L + Sbjct: 245 RHSHVLMAVNNPCRYYWGDIVEGREWLRRQAEQRHRRRSGMPAAL-----------DDST 293 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQ--------ELDAFVDVTPDN---LLHNIQS 340 +PLLASWG+ GRD+I LL+D + Q ++D F + P LL +Q Sbjct: 294 LHLHAHPLLASWGRQGRDFIALLADYDRWQSAAATHAQDIDLFDEAVPAGTLPLLQQVQQ 353 Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 +LELE L D SI FHV HSP REVE+LHD+LLAM ++ Sbjct: 354 AVLELEPL------------PAEPHRLPLPDHSIAFHVAHSPLREVEILHDQLLAMFDDP 401 Query: 401 P-TLTPRDIIVMVADIDSYSPFIQAVFGSAPADR--YLPYAISDRRARQSHPVLEAFISL 457 L PRD++VMV DI SY+PFI+AVFG P D ++P+A+SD+ A + P+L A L Sbjct: 402 ELALKPRDVMVMVPDISSYAPFIRAVFGKLPPDHPRFIPFALSDQSAVSTEPLLRALQQL 461 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L LP R +VL LLDV + RF + E L L +W+ SGIRWG+ EL +P Sbjct: 462 LDLPALRLTVSEVLELLDVAAMRRRFRLRETDLPLLTRWIEGSGIRWGLSAAQRAELGMP 521 Query: 518 AT-GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 Q++W FGL RMLLGYA + WQ + PYDE G+ A L G LA LL L WR+ Sbjct: 522 DDFDQNSWHFGLDRMLLGYACGAGAS-WQGMAPYDEVGGMDAALAGQLADLLSTLAHWRQ 580 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLP-DAETEAAMTLIEQQWQAIIAEGLGAQY-GDAVPL 634 L + W + A D I +A G +PL Sbjct: 581 CLQEPATPAGWQARIAALAEACLDIKDEHDLLLYAGIADTLDNWVATLDGNGLADTRLPL 640 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 ++RD L +L +S RFL G VN TLMPMR+IPFKV+CLLG+NDG YPR F Sbjct: 641 EVVRDVLLGQLADTSVSMRFLGGAVNFGTLMPMRAIPFKVICLLGLNDGDYPRSQNRADF 700 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 DLM+Q + GDRSRRDDDRYL LEAL+SA+++ Y+S++G+S +DN R PSVLV++L DY Sbjct: 701 DLMAQDYRPGDRSRRDDDRYLLLEALLSARRRFYLSWVGKSPRDNRPRPPSVLVEQLRDY 760 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ----------PGERQSYAR 804 + L + + + A LT H PF P+ + +Y Sbjct: 761 LAAGWQ---AAPLGTEPATTGLLAALTTEHPLQPFSPRYFSRAPDARPQPDQPPLFTYDS 817 Query: 805 EWLPAASQAGKAHSEFVQPLPFTL--PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 +W TL RF P F RL+V F D Sbjct: 818 DWRAIHDATDPPAEPAAALPLPLPDWDGRTDAVTLARFLRQPAATFLHGRLKVRFGELDE 877 Query: 863 EIPDTEPFILEGLSRYQINQQLLNA------LVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 D EPF L+ L+ +Q+ +LL A + R G LP+GA G Sbjct: 878 LAED-EPFALDPLATHQLKSRLLEAVRDVPEAETGRHWQAAATRLTEEGGLPFGAAGAQL 936 Query: 917 WETQCQEMQQLADRVI-----------------ACRQPGQSMEIDLACNGVQI------- 952 + + L Q+ + C+G+Q Sbjct: 937 LQACHAPVMALRQNWHRLDDLTDLPPLTLPPLLLPLAGDQTATLLAHCDGLQAVAADSPP 996 Query: 953 -------TGWLPQVQPDGL-LRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDG 1004 TG L G RW P + + W HL A+G L + + Sbjct: 997 LRRRVMRTGRLADSAGRGADTRWIP---RLHTLVGFWPAHLALQAAG-LAIPTLIVGETV 1052 Query: 1005 EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTL 1064 + PL A++A H L L +R+ PL + ++ G WL+ Sbjct: 1053 TLQLAPLPADEARHCLQVLAGYWRQAHGEPLPLPCKTAGVWLQ----------------- 1095 Query: 1065 QKARTKFLQAYEGNMMVRGEGDD-IWYQRLWRQLTPETMEAIVEQSQRFLLPLF 1117 Q+ + QAYEG GE + RL+ + + + PL Sbjct: 1096 QQDASAARQAYEGGYHSTGERAESPALARLFPAFEDLDLARLDALATDLYAPLL 1149 >UniRef50_B9CWC7 Exodeoxyribonuclease V gamma chain n=2 Tax=Actinobacillus minor RepID=B9CWC7_9PAST Length = 1085 Score = 850 bits (2197), Expect = 0.0, Method: Composition-based stats. Identities = 379/1149 (32%), Positives = 580/1149 (50%), Gaps = 102/1149 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M VY+SN+L L ++ + +DPF+PE ILVQS GMAQWLQM +++ G+A N Sbjct: 1 MFTVYYSNQLTALAEMLIHHQKVNPNEDPFQPETILVQSVGMAQWLQMQIAESMGVAGNY 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +FP P SF+W + + P +PKE+ F + M+W+LM ++P +LER +F LR YLT D + Sbjct: 61 EFPFPTSFLWQQYRLLFPHLPKENIFERGVMAWRLMRIIPAVLERPEFQGLRAYLTHDKE 120 Query: 121 K--RKLFQLSSKAADLFDQYLVYRPDWLAQWETGH----------------LVEGLGEAQ 162 + KL+QL++K ADLFDQYLVYRP WL WE G L G+ E Sbjct: 121 QDSLKLYQLATKIADLFDQYLVYRPHWLVHWENGQWQEVVREIQIQPFSTNLQTGIQENV 180 Query: 163 AWQAPLWKALVEYTHQLGQPRW----HRANLYQRFIETLESATTCP-PGLPSRVFICGIS 217 WQ+ LW L+E T + HRA L Q+F E LE T LP R+F+ GIS Sbjct: 181 HWQSLLWNLLIEDTRKDYDELLFTTSHRAYLQQKFFEKLEDLTEEEYKKLPKRIFVFGIS 240 Query: 218 ALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLF 277 +LP L L ++ ++HL F NP + YWGD + A L K+ +Q+ E ++L Sbjct: 241 SLPTTQFATLLKLSEYCDVHLFFLNPSQMYWGDSIENAALEKMALKQQLSETEIQQL--- 297 Query: 278 RDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHN 337 GN LL+ WGK GRD+ L++ + ++ F + ++ L Sbjct: 298 --------------LAQQGNQLLSMWGKQGRDFFDQLAEYS-PEPIELFFENDQESNLSR 342 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 ++ IL +N + + D+SI H CHS REVEVL ++LL + Sbjct: 343 LKQAILNNDNPSYLEL---------------ENDNSIQIHNCHSAMREVEVLQNQLLRLF 387 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD--RYLPYAISDRRARQSHPVLEAFI 455 E++P L+P+DIIVM ADI+ Y+P+I AVF + RY+P+ ISD++ Q PV+ +F+ Sbjct: 388 EQNPHLSPKDIIVMAADIEQYAPYINAVFSRYGREDNRYIPFTISDQKISQVDPVISSFL 447 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 +L L DS F +E +L LL+V + +F E L LR W+ ESGIR + + + Sbjct: 448 VMLKLRDSTFSAEALLDLLEVEAIGQQFGFNREDLTCLRHWIKESGIRSTLTIEQENGWQ 507 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 ++W GL R+LLG ++ G WQ+ + ++ES GL AE VG LA + +L W Sbjct: 508 ----NYNSWENGLDRLLLGSCLKEENGIWQNTIAFNESYGLSAERVGKLAEFIEKLTAWS 563 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 + P+ W D++ A + + + A+ LI+Q+ +A+ A L A++ + V Sbjct: 564 VLSLESHPISTWKQALEDLVKAVYQENDASNDALFLIQQELEALEALVLQAKFDEPVAFE 623 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 ++ L RL+ + F+ G VN CTL+PMR+IPFKVVCLLGMN+ +PRQ FD Sbjct: 624 VIERALQDRLNSQSHVMHFMTGKVNFCTLLPMRAIPFKVVCLLGMNEADFPRQPVINSFD 683 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 LM P++GDR+RR+DDRYLFLEAL+SA++ YISY+G+S+ + ER PSVLV + +DY+ Sbjct: 684 LMQYHPRKGDRARREDDRYLFLEALLSAEEVFYISYVGKSLVKDEEREPSVLVSQFVDYL 743 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 + + L ++ H F +N++ G SY +EWL A QA + Sbjct: 744 AKYYSLSLEQ-----------------EHPMNAFSERNFKSG-YVSYHKEWLEFAQQAVE 785 Query: 816 AHSEFVQPLPF--TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE 873 +H F + LP LP+ + L+ L F P + FF L + FR ED EI DTE F L Sbjct: 786 SHDFFAKSLPENSELPKEIELDELIAFIQSPTKQFFTRNLGIYFREEDDEIEDTEHFSLS 845 Query: 874 GLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL-ADRVI 932 L YQ+ QLL E F + G++P FG++ +Q + + Sbjct: 846 KLDEYQLTAQLLTTSSEMTSP--FFEKETLKGNIPVLNFGKLTQTELTNRIQDMRVELAE 903 Query: 933 ACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGG 992 + + L C V++ G LP + ++ WR L ++LW+ L+ Sbjct: 904 YLKGESDILPFSLQCTQVELVGNLPNLFGQEIVLWRVGKLRDKDTIKLWIYFLILTLLEK 963 Query: 993 NGESRLF-LRKDG--EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTC 1049 +++ L D + F + QA L I+ + + +S T Sbjct: 964 PFALKMYTLEGDKLTCFTFNTIEVSQAKEILEIYIKAFLK---------NKSNLTIAVTQ 1014 Query: 1050 YDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQS 1109 + ++ + + EG + + +R+ Q + +AI + + Sbjct: 1015 DLENYFKKMPQENIAEYCYQSLSKLSEGLN-----DEASYLKRILTQSSLIDYQAIHQNT 1069 Query: 1110 QRFLLPLFR 1118 + + Sbjct: 1070 LDWFALMQE 1078 >UniRef50_C5JAU6 DNA helicase/exodeoxyribonuclease V, gamma subunit n=1 Tax=uncultured bacterium RepID=C5JAU6_9BACT Length = 1183 Score = 848 bits (2190), Expect = 0.0, Method: Composition-based stats. Identities = 399/1196 (33%), Positives = 560/1196 (46%), Gaps = 127/1196 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG------ 55 L + H NR+++L + RE P E E+ILVQS GMAQWL++ L++ G Sbjct: 10 LTLIHGNRIELLRDDLVDRFRREPSA-PLESEIILVQSNGMAQWLKLGLAETGGRGGGGG 68 Query: 56 ----IAANIDFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFT 109 IAA ++ LPA F+W ++ VL E +P+E+ F+K + W+LM LLP + E F Sbjct: 69 SGLGIAAALELLLPARFLWRIYRSVLGEAAVPEETPFDKTRLVWRLMRLLPGIAAEERFA 128 Query: 110 LLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEA 161 LRH+L D+D+RK +QLS + ADLFDQY VYR DWLA W G + + E Sbjct: 129 PLRHFLRQDADQRKCYQLSVRLADLFDQYQVYRADWLACWAKGEDLLIDARGRRSAIPEE 188 Query: 162 QAWQAPLWKALVEYTHQLGQPRW----HRANLYQRFIETLESATTCPPGLPSRVFICGIS 217 Q WQA LW+ L+ + G RA ++ F+ + P GLP RV + GIS Sbjct: 189 QRWQAALWRLLIADVARTGAGVDAVSGGRAEVHAAFLRRARTEDLLPAGLPRRVTLFGIS 248 Query: 218 ALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLF 277 ALP L+ L AL + ++ + NPC++YW D+ L + QR Sbjct: 249 ALPYQSLEVLMALSRWTQVLMYVHNPCQHYWADVIAGRELFRARRGQR------------ 296 Query: 278 RDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV-------- 329 + + PLLA+WG GRD+I LL D L A + Sbjct: 297 GGAHGVAEPVPEALLHLHAQPLLAAWGMQGRDFIGLLEDAVGEGALWAEGEPLAFDVERE 356 Query: 330 --------TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHS 381 LL +Q DILEL R+ D S+ FHV H Sbjct: 357 ACFVARGGAAGTLLQQLQEDILELRPLDET--------RALWPPVDAQQDRSLCFHVAHG 408 Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG--SAPADRYLPYAI 439 QREVE+LHD+LL L DP+L+PRDI+VMV DID+Y+ IQAVFG A R++P+ + Sbjct: 409 AQREVEILHDQLLDALNADPSLSPRDILVMVPDIDAYAAHIQAVFGLHGANDPRFIPFVV 468 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 +R R++ +L LL L +R + D+L L++P L RF I E L LR+W+ + Sbjct: 469 VNRTRRKADLLLMTLERLLGLARARVTANDLLDWLELPALRRRFGIAEADLPLLRRWIRD 528 Query: 500 SGIRWGIDDDN-VRELELPATG------QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 SGIRWG+D + L +P +HTWRFGL RMLLGYA+ W + P+DE Sbjct: 529 SGIRWGLDASHCGAVLGVPGGEIDGTRTRHTWRFGLERMLLGYAVGDRGAPWCGIAPFDE 588 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 EL+G LA L+ + R + + W R +L FF P+ E A TL+ Sbjct: 589 IGLGDGELLGRLADLVAAVEATWRQMKSAATVAAWCGRLRGVLARFFAPEEEDADAYTLL 648 Query: 613 E--QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 A A AQ D +P++++ + L++ +SQ F AG V TLMPMR+I Sbjct: 649 RLDAHLDAWEALCAEAQLVDPLPVTVVGEYWLSCLEEGGLSQGFFAGAVTFATLMPMRAI 708 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 PF+ VCLLG+NDG +PR + FDLM + + GDRSRR+DDRYLFLEAL+SA+++L + Sbjct: 709 PFRQVCLLGLNDGAFPRPGNRIDFDLMGGRYRPGDRSRREDDRYLFLEALLSARERLALF 768 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 ++GR I DN+ PSVLV +L D++ L G S + A LT H PF Sbjct: 769 WVGRGIHDNAVAPPSVLVGQLRDHLAAGWRLAGGADPAGG-SGQALVAALTVEHPLQPFS 827 Query: 791 PQNY-----QPGERQSYAREWLPAASQ---AGKAHSEFVQPLPFTLPETVPLETLQRFWA 842 + +YA EW PA A P T E + L L R + Sbjct: 828 RDYFCRGAETDARLFTYAHEWRPAREAGAPAALPVGSVPLLPPVTREEPLRLVELARLFK 887 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFR 902 PVR FFQ RL V F E + D EPF L+ L +Q LL A E D +R R R Sbjct: 888 DPVRGFFQQRLGVRFEREALFLDDHEPFDLDALEHWQSIDALL-ACREPDALDRGLERLR 946 Query: 903 AAGDLPYGAFGEIFWETQCQEM-------QQLADRVIACRQPGQSMEIDLACNG--VQIT 953 +G LP G GE E + + Q L R ++ +G V + Sbjct: 947 LSGVLPAGGQGEHLAEALRETLTRLNGQEQALLARWSGEEIGERTFRFARQIDGRSVAVV 1006 Query: 954 GWLPQVQPDGLLRWR----------PSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKD 1003 L V+ + R ++ ++ W+EHL + G G + + L +D Sbjct: 1007 DSLRGVRRGNGVLGRIVRTASRVLNAGVIRPEVLIEAWVEHLAWQMRLGAGIT-VVLGRD 1065 Query: 1004 GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDST 1063 G PL+ + A L L+ + +GM PL LP G A Sbjct: 1066 GGIELAPLSRQAAGMALEALLAAWWQGMRHPLAFLPGVGWAGFDGV-------------- 1111 Query: 1064 LQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETME-AIVEQSQRFLLPLFR 1118 +KA F + + +R++ T + + S+ L PL Sbjct: 1112 -EKAEKAFERI---------RVHHPYVRRVFVDFTAFAASGELEQWSEALLRPLRE 1157 >UniRef50_D0KY94 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KY94_HALNC Length = 1183 Score = 838 bits (2166), Expect = 0.0, Method: Composition-based stats. Identities = 368/1212 (30%), Positives = 559/1212 (46%), Gaps = 147/1212 (12%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-------F 54 + NRL++L+ ++ ++R L P E E LVQS GMAQWL++ L++ Sbjct: 15 FLLIQGNRLELLQQVLIDWLKRHPLA-PLENETFLVQSNGMAQWLRLGLARPRSAQDGGL 73 Query: 55 GIAANIDFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLR 112 GIA I+ LPA W + VL +P E+ +K + W+LM LLP L+ F LR Sbjct: 74 GIATGIEMILPARLQWQCYRAVLGTDFVPAEAPLDKDKLVWRLMRLLPNLIHTPSFLPLR 133 Query: 113 HYLTDD--SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV-----EGLGEAQAWQ 165 HY+ D D R+L+QL+ + AD FDQY VYR DWL W+ GH L + Q WQ Sbjct: 134 HYIVTDQRPDDRRLYQLALRVADQFDQYQVYRADWLRHWQEGHDDLPAHETRLPDEQRWQ 193 Query: 166 APLWKALVEYTHQLGQPRWH------RANLYQRFIETLESATTCPPGLPSRVFICGISAL 219 PLW+AL+ + R RA+L+ F + P GLP R+ + G+S++ Sbjct: 194 PPLWRALLADIRERQDDRDGIEFAAGRADLHTAFRKAASEQKARPEGLPRRIVVFGLSSI 253 Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 P L L + ++ + F NPC YYWGDI D L + RR Sbjct: 254 APQVLDVLAVASRWSQVIVCFLNPCEYYWGDIIDGHQLFAQRYQGRRPYKSAPNETA--- 310 Query: 280 SENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDA-----------FVD 328 +PLLA+WG+ GRD + LL E + +L A VD Sbjct: 311 ---------------HAHPLLAAWGRQGRDLMRLLDQFEENAQLAANPLTLTPFESTVVD 355 Query: 329 VTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEV 388 +LL IQ DIL+L R+ N+R D S+ FH+ HSP REVE+ Sbjct: 356 SAKSSLLTLIQDDILKLRTPDEL--------RALNRRLEPDQDHSLHFHIAHSPLREVEI 407 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA--PADRYLPYAISDRRARQ 446 LHD+LLA E D +L P DIIVMV D+ Y+P I A+FG +++P++ISD+ A Sbjct: 408 LHDQLLAAFEADTSLKPTDIIVMVPDMSLYAPAISAIFGRFGRDDPQHIPFSISDQAASG 467 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 ++ A +L+LP SR + ++L LL P+L ARF I+E L L W++ +GIRWG+ Sbjct: 468 QVALINALEQILNLPTSRLLRSELLDLLGSPLLLARFGISETDLTTLHDWIDSAGIRWGL 527 Query: 507 DDDNVRELELP-ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 + + +P Q+TW FGL R+LLGY W + P+ G+ AELVG LA Sbjct: 528 NAQHREAFGVPPGMEQNTWAFGLNRLLLGYLSGDENAIWDEIEPHPVMDGISAELVGKLA 587 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA-----------AMTLIEQ 614 L+ QL+ + + L+++ EW+ R ++ FF + + Sbjct: 588 QLVQQLDKYTQRLSEKCTPTEWVARLRRLMTDFFSLSDTQNHLDSPEIQIEMDTLARLHN 647 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 + + +A+ A + + + + +R RL+ R+ QRF+ G VN TLMPMR+IP++ Sbjct: 648 ELERWLADCSVAGFENEIDIETVRHAWLNRLEPHRLHQRFIVGGVNFATLMPMRAIPYRH 707 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 + LLGM+D YPR+ P FDLM+ + + GDR+RR+DDRYLFLEAL++A+++L IS++GR Sbjct: 708 IYLLGMDDANYPRRQTPNDFDLMNGRYRPGDRARREDDRYLFLEALLAARERLSISWVGR 767 Query: 735 SIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 +I +N R SVLV +L DY+ Q +P + + + T H PF + + Sbjct: 768 NINNNKIRPASVLVSQLRDYLDQFWAVPEPHSCSEIQ---------TTEHPLHPFSRRYF 818 Query: 795 QPG--ERQSYAREWLPAASQAGKAHSEFVQPLPFTLP-ETVPLETLQRFWAHPVRAFFQM 851 + ++A +W LP LP E + L TL F P Sbjct: 819 SADNTDLFTFANDWRAVHDSTQGTSK---TELPIWLPKEPLTLNTLSDFLRTPAHTLLTK 875 Query: 852 RLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL-------------- 897 R V R +E+ D EPF L+GL R+Q+ +++ + + Q + Sbjct: 876 RFGVYLRPTATELEDHEPFELDGLQRWQLKKEINDRVRHQLAIQAHATSQMTTPTIEHIS 935 Query: 898 ------FRRFRAAGDLPYGAFGEIFWE-----TQCQEMQQLADRVIACRQPGQSMEIDLA 946 + + R G LP + + E Q Q +L R + I + Sbjct: 936 ALISTQYGQARLGGRLPIVSPAFEYSELLPLIDQWQRWLELNLRFHQTAAKSPVLSIR-S 994 Query: 947 CNGVQITGWLPQVQPDGL---------------LRWRPSLLSVAQGMQLWLEHLVYCASG 991 G+ + +P V R + + + W HL+ + Sbjct: 995 DRGIMLEASVPDVYSTESSIPNDTLARLIFIEGKLHRGQDIEWHKCVAQWPAHLLAQLTH 1054 Query: 992 GNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYD 1051 G+ E+ L + G F P+ E A +L L++ + + + AP + ++ L Sbjct: 1055 GSVETYLI-GETGTLCFTPIEKEMAKQHLLTLLDAWFDAVQAPYPLACKTAFCLLAQEMT 1113 Query: 1052 AQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDD-IWYQRLWRQLT------PETMEA 1104 +N A K + +EGNM V GE + RLW + + Sbjct: 1114 PENT---------DSALKKARECFEGNMKVPGEVTNSPALARLWPDFSTLINGQSFAKKQ 1164 Query: 1105 IVEQSQRFLLPL 1116 E SQ P+ Sbjct: 1165 FTELSQIIYAPI 1176 >UniRef50_C6MAC3 Exodeoxyribonuclease V, gamma subunit n=3 Tax=Neisseriaceae RepID=C6MAC3_NEISI Length = 1068 Score = 837 bits (2162), Expect = 0.0, Method: Composition-based stats. Identities = 338/1135 (29%), Positives = 528/1135 (46%), Gaps = 94/1135 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +Y SNRL+ L AL I L+ E I+VQS GM ++L + L+++ G+AAN+ Sbjct: 1 MFYLYQSNRLESLAALFAGIQRVRPLESALAAEQIVVQSQGMRRYLSVYLARELGVAANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLP--QLLEREDFTLLRHYLTD- 117 F LPA W + +++P+IP S F+ + M W+L+ L + +F +R L Sbjct: 61 QFSLPAGLTWQLMQKLIPDIPALSPFSPEVMRWRLLDLFRSERFQTTSEFENVRSILQSY 120 Query: 118 -DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYT 176 S + +QL+ + AD+FDQYLVYRP W+ W+ G L+ GLGE + WQA LW+ Y Sbjct: 121 LGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQEGKLL-GLGEDEVWQAQLWR----YL 175 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 Q HR L+++ + +L+ LP R F+ GIS + P+YLQ LQ + +H ++ Sbjct: 176 DDGNQSAPHRVALWEKLLSSLDK-----AHLPERFFVFGISTMAPMYLQLLQKISEHCDV 230 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 + NP YWG++ + A L K + G Sbjct: 231 FVFALNPSGQYWGNVIEAAQLLK--------------------------GGDEADLSQTG 264 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 +PLLAS GK GRD+ L+++ +E F +V+ D LLH +Q+DI L + Sbjct: 265 HPLLASLGKQGRDFFDFLTEIG-LEEQPVFEEVSDDTLLHCLQNDIQNLRMPSEHS---- 319 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 R D SI HSP RE+++L D+LL +L E P P DI V+ +I+ Sbjct: 320 --------RADLLGDGSIRIVSAHSPLRELQILKDKLLRILHEHPDWQPHDIAVLTPNIE 371 Query: 417 SYSPFIQAVFGSA-PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 YSPFI+AVFG A + LPY++SD + + +L A L L +SRF + VL LL+ Sbjct: 372 PYSPFIEAVFGQAQGGAQALPYSVSDVKLSRRQSLLYALEQTLDLLESRFEVDKVLPLLE 431 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 ++ RF +T + L L V E + WG+D A TW+ L R++LG+ Sbjct: 432 SGLVLRRFGLTADDLPLLHDTVAELNVHWGLDGTMRGA----ADNLFTWQQALERIVLGW 487 Query: 536 AMESA-QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 + WQ+V + ++ G A+ + L+ + EEW CRD+ Sbjct: 488 MLPDDGSPLWQNVSAWHGDVN-RLDVFGRFAAFIRTLSRLAAEWRKPASAEEWTERCRDL 546 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 + + FLPDA+ + A+ EQ E A + +P + + + L F Sbjct: 547 VQSLFLPDADDQYALQQFEQALAKWQEETALAGFSGTLPQHTVIRHIRRFL-GSESQAGF 605 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 L G + C+++PMRS+PFKV+CLLG+NDG +PR FDL+++ P++GDR+RRDDDRY Sbjct: 606 LRGGITFCSMVPMRSLPFKVICLLGLNDGDFPRNTKAAVFDLIAKHPQKGDRARRDDDRY 665 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 LFLEA+ISA+ LY+SY+GRSI+++ E PS LV ELID I Sbjct: 666 LFLEAIISARDILYLSYVGRSIRNDDELAPSALVSELIDTIAA----------MTGRRSK 715 Query: 775 RVKAHLTCLHTRMPFDPQNYQP----GERQSYAREWLPAA-SQAGKAHSEFVQPLPFTLP 829 + H H PF + + + S +++ A +A F + L P Sbjct: 716 GLAEHWVEQHPLQPFSHRYFIADNISDDLFSTRQDYAEALNRPREQARPFFSEALEENTP 775 Query: 830 -ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 TV + RFW +PV+A+ Q L D EPF + + I L+A Sbjct: 776 VPTVWQDDFIRFWKNPVKAWLQQTLGWREPYRDEAWESAEPFEPQRADK--IAAAYLDAR 833 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN 948 D + R A LP G G++ W+ Q + D + ++ + Sbjct: 834 RHNQDFQETAVRLDAESLLPAGELGKL-WQQNFQAAAKRIDGALLQSPKLPPFAYEVPFD 892 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGG---NGESRLFLRKDGE 1005 G + G L + G + + + Q + L LEHL++CA G ++ + Sbjct: 893 GQTLQGSLGNLYQCGQVFYLDRKPNAPQRIALLLEHLIFCAVGSSETETRQTHIVQPEET 952 Query: 1006 WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQ 1065 +P + + QA L + + + G + PL ++ A + Q + + Sbjct: 953 TLYPEIPSSQAQEMLQKWLAFFNLGQTRPLPFFAKTSLAAAEAYGKKQ---------SWE 1003 Query: 1066 KARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEA--IVEQSQRFLLPLFR 1118 K ++Y GN + +G+ D ++ E +E + L+PL Sbjct: 1004 DTLNKARESYHGNKVSKGQKDYTEVALVFGNEDTEPVEGALFQRLVEELLIPLLD 1058 >UniRef50_Q5QUQ7 Exonuclease V gamma subunit n=2 Tax=Idiomarina RepID=Q5QUQ7_IDILO Length = 1155 Score = 836 bits (2159), Expect = 0.0, Method: Composition-based stats. Identities = 376/1127 (33%), Positives = 552/1127 (48%), Gaps = 96/1127 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 V H +RL+ L + + L P E E +LVQS G+AQWL++ L+Q GIAA ID Sbjct: 8 FIVAHGHRLEDLTDVAVTFTQNYPLA-PLEQETVLVQSNGIAQWLKINLAQASGIAAMID 66 Query: 62 FPLPASFIWDMFVRVLPE-IPKESAFNKQSMSWKLMTLLPQLLER-EDFTLLRHYLTDDS 119 LPA F W + VL + IPK S F+K ++W+LM LLP+L+E F L+HY +DDS Sbjct: 67 VTLPARFQWKAYRAVLGDDIPKTSPFDKDRLTWRLMRLLPELIEHNPHFAPLKHYTSDDS 126 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL----VEGLGEAQAWQAPLWKALVEY 175 D RKL+QLS + ADLFDQY VYR DWL W G + + + Q WQ LW+A+ Sbjct: 127 DGRKLYQLSGRLADLFDQYAVYRADWLDNWVRGQDMLEQEQPVEDEQLWQPELWRAVSND 186 Query: 176 THQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIE 235 +RA L+QRFI+T ++ T P GLP RV + GIS+LP LQ L A+ + + Sbjct: 187 IGIDDY-WNNRAELHQRFIDTAQALTERPAGLPPRVVVFGISSLPQQMLQVLDAIKGYTQ 245 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 I L NP +Y+W DI D + + ELP N D + Sbjct: 246 ILLCVHNPSQYHWADIVDGKEALRQAVKASSRLKHKPELPDD---------PNDDELHQL 296 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQE---------LDAFVDVTPDNLLHNIQSDILELE 346 +PLLASWGK GRDYI LL + + L+ F D+LL +Q DIL L Sbjct: 297 AHPLLASWGKQGRDYIRLLDLYDETLAKQEAFNTIKLELFEPHNTDHLLAQLQDDILNLR 356 Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 + D S+ FHVCHSPQRE+EVLHD+LL +DP L PR Sbjct: 357 PVQETREL---------WPTPNTADKSLQFHVCHSPQRELEVLHDQLLDAFAKDPELKPR 407 Query: 407 DIIVMVADIDSYSPFIQAVFGSAP------ADRYLPYAISDRRARQSHPVLEAFISLLSL 460 D++VM+ D+++Y+P+I AVFG R +PY I+D+ R P++ A LL + Sbjct: 408 DVMVMLPDVNTYAPYIDAVFGRYHNRFGERDPRAIPYTIADQGERHQRPLMIALELLLQV 467 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA-T 519 RF D+ LL VP + RFD++++ L L++WV E+G RWG++ + + +PA Sbjct: 468 DQLRFTQTDLFNLLSVPAVQQRFDMSDDDLPQLKRWVKEAGARWGLNAEQRAQFYMPAAE 527 Query: 520 GQHTWRFGLTRMLLGYAMES-------AQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 ++W FGL RM+ GYAM W +V PY E +GL A LVG LA ++ L Sbjct: 528 ETNSWWFGLKRMIAGYAMGDLADVNLENDSPWANVEPYTEVAGLSAALVGCLADVVRTLE 587 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL-IEQQWQAIIAEGLGAQYGDA 631 W + E L EW+ +L FF + +++ + + + + + A Sbjct: 588 QWWQRAQGEHSLPEWVTQGEWLLEQFFEAEEDSDRLLLAKLSDELYQLRDICVEADNESQ 647 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 + L + +D +R+DQ+ ++QRFLAG VN TLMPMR+IPFK VC+LGMN+ YPR Sbjct: 648 LRLPIFKDAWLERVDQQNLNQRFLAGAVNFATLMPMRAIPFKYVCVLGMNESDYPRSTPR 707 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 + FDLM+ + + GDRSRRDDDRYLFLEA++SA+ Y+S++G S +DNSER PSVLV +L Sbjct: 708 VDFDLMTDRYRPGDRSRRDDDRYLFLEAMLSARDCFYLSWVGYSAKDNSERTPSVLVAQL 767 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY--QPGERQSYAREWLPA 809 D++ Q + LT +H PF+P + + + +YA EW A Sbjct: 768 RDHLQQGWEVD--------------INSLTVVHKLQPFNPYYFNQEDSDYFTYASEWAQA 813 Query: 810 ASQ--AGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 A + + L T+ + ++RF P R +F RL F ++ D+ Sbjct: 814 HQGAVASTSRTASETAADDELERTLSINDIKRFIEEPARLYFNWRLDTYFSRNSEDLDDS 873 Query: 868 EPFILEGLSRYQINQQLLN----ALVEQDDAER----LFRRFRAAGDLPYGAFGE----I 915 E F+++ L + + +L++ AL+ E R + G L GA E Sbjct: 874 EAFVMDNLQSWSLTTRLVDAGKKALLNGAGIEASLLKELNRIKREGALGIGAIAEQNGLQ 933 Query: 916 FWETQCQEMQQLADRVIACRQPGQ-SMEIDLACNGVQITGWLPQVQPDG-----LLRWRP 969 E + ++ + + + +G+ I + + + + Sbjct: 934 LLEQSQEILETYQQSIAGYSGVNEFPETVFFEHSGLTIDDTVTGLHSNENGERLWVVTSA 993 Query: 970 SLLSVAQGM----QLWLEHLVY-----CASGGNGESRLFLRKDGE-WRFPPLAAEQALHY 1019 S ++ G W Y + L + K G + P+ AE A+ Sbjct: 994 SNIAAKNGKGINSGGWKHASAYYLGLLLLNLQKPTRLLIVSKGGCQLQVAPVPAELAVQQ 1053 Query: 1020 LSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQK 1066 L Q++E P + + G WL D L ++ QK Sbjct: 1054 LEQILELVALSAQQPQPMHLDVGMTWLSAMDKNSQDEALAHEAARQK 1100 >UniRef50_C7I4N7 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Thiomonas intermedia K12 RepID=C7I4N7_THIIN Length = 1173 Score = 835 bits (2156), Expect = 0.0, Method: Composition-based stats. Identities = 380/1203 (31%), Positives = 554/1203 (46%), Gaps = 142/1203 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L + NRL++L + + ++ L P E E+ILVQS G A+WL+M L+ + GI A Sbjct: 9 LFILQGNRLELLRDALLEWLAQQPLA-PLEEEVILVQSNGAAEWLKMALAAQGGICAATR 67 Query: 62 FPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQ------------------ 101 LP F+W + +VL P +S +K ++W+LM LL Sbjct: 68 VELPGRFLWRTYRQVLGRAATPSQSPLDKPLLTWRLMRLLGAPGAELHPARPPWESRKLG 127 Query: 102 ---------LLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETG 152 L+ + L YL D + QL+ + ADL+DQY +YR DWL W G Sbjct: 128 AAQRFLEGGTLDADVCAPLLQYLQGQ-DLLRRLQLAQRLADLYDQYQIYRDDWLDAWAQG 186 Query: 153 HLV--------EGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTC- 203 V L E Q WQA LW+ ++ + + + RA + + ++ L +A Sbjct: 187 RDVLIDALGRATPLPEDQRWQAWLWRRVLAELSE-AERQSTRAQVQRAMLQALNTADIAA 245 Query: 204 ---PPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKL 260 P LP RV + G S LP V L AL AL +++++ + NPCRY+W DI + L + Sbjct: 246 DPTRPALPRRVVLFGASHLPTVVLDALVALSRYVQVLIALPNPCRYHWADIIEGRELLRA 305 Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESS 320 +R D + +PLLA+WG+ GRD++ L + Sbjct: 306 APARRPLRAGDLAQVSL------------EVMHAHAHPLLAAWGRQGRDFMRQLDAFDER 353 Query: 321 Q---------ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 D F D D LL +Q+ I +L + + D Sbjct: 354 ANAADRPGLPRHDLFDDAPGDTLLEQMQAAIRDLLPLPEHS-----------RTLISAAD 402 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPT---LTPRDIIVMVADIDSYSPFIQAVFGS 428 S+ FH+ HS QREVE+LHD+LL +L + L PRDI+VM DI ++P I+AVFG Sbjct: 403 RSVVFHIGHSAQREVEILHDQLLHLLAQPSGGRPLRPRDIVVMTPDIAPFAPAIRAVFGQ 462 Query: 429 AP--ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 P +R++P+ I+D AR + P+L A LL LP R ++ D+ ALLDVP +A RF + Sbjct: 463 YPPGDERFIPFDIADLSARATEPLLLALDWLLRLPQERILASDISALLDVPAIARRFGLR 522 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPAT-GQHTWRFGLTRMLLGYAMESAQGEWQ 545 E L QW+ +G+RWG+D D+ L L A Q++WRFGL RMLLGYA G ++ Sbjct: 523 PEDRPRLTQWIVGAGVRWGLDVDHRAHLGLGACGEQNSWRFGLRRMLLGYAGAGEDG-FE 581 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 +++P+DE GL A LVG LA LL L W R Q +W RD+L+A LP Sbjct: 582 NIVPFDEIGGLDAALVGPLADLLDVLQAWWRTALQNATPGQWAQYARDLLDAISLPQDLR 641 Query: 606 EAA-MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 E ++ + AQ+ +AVPL +LR+ LD+ RFLAG V CTL Sbjct: 642 ERETRARLDDALSTWLDHCAAAQFDEAVPLQVLRESWLSGLDEAAGGGRFLAGGVTFCTL 701 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ--KPKRGDRSRRDDDRYLFLEALIS 722 MP+R+IPF+VVCLLGMN+G YPR+ FDL+ Q + + GDR+RR+DDRYL LEAL+S Sbjct: 702 MPLRAIPFEVVCLLGMNEGDYPRRSPHSDFDLLHQPGQYRPGDRARREDDRYLMLEALLS 761 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 A++ LY+S+ GRS +DN+E+ PSVLV +L DY+ G + A T Sbjct: 762 ARRMLYVSWAGRSPRDNTEQPPSVLVAQLRDYLAAGWQGEGQ---------GDLLAQRTT 812 Query: 783 LHTRMPFDPQNYQPG-ERQSYAREWLPAASQAGK-AHSEFVQPLPFT-LPETVPLETLQR 839 +H PF + ++ +YAREW A + P+PF L E + L+ L R Sbjct: 813 VHPLQPFSRRYFEGDAALFTYAREWRQAHGGVAENGTGNGNGPMPFEPLTEPLSLQQLAR 872 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE------QDD 893 F +PV+AFF+ RL V F E D E F L+GL R+ + L++ + Sbjct: 873 FLKNPVKAFFRTRLDVVF-DELQTQDDDEVFALDGLDRHSLLSHLIDDPQAAVYEGIEAA 931 Query: 894 AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ-------------PGQS 940 R R+ + +G LP A G + QE L Q Q Sbjct: 932 VARRVRQLQGSGALPMRALGSRVAQGLEQEALPLLRSWSELAQAYPQAVDKRALIVEHQD 991 Query: 941 MEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVA--QGMQLWLEHLVYCASGGNGESRL 998 + +D +G++ G P R + + W+ + A G+ L Sbjct: 992 LRLDDWLDGLRTGGQSPIWMQLNASRLSDGKAQARAEKLIDAWVRQMAASA-CGHAVQGL 1050 Query: 999 FLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAML 1058 + D P L +A +L L+ ++EGM PL + A LK Sbjct: 1051 LIGADARVDLPSLPPAEARDHLHTLLAAWQEGMRRPLPFTARTALAELKNRKG------- 1103 Query: 1059 DDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETME-AIVEQSQRFLLPLF 1117 + YEG GE ++ R + + + PL Sbjct: 1104 -------------QEVYEGGYCTSGEVEEPCLARTFPDFASLSADGRFETYLAELFRPLA 1150 Query: 1118 RFN 1120 + Sbjct: 1151 DWA 1153 >UniRef50_C7LVF8 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVF8_DESBD Length = 1064 Score = 830 bits (2143), Expect = 0.0, Method: Composition-based stats. Identities = 345/1133 (30%), Positives = 540/1133 (47%), Gaps = 93/1133 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 ++ SNRL+ L L+ +++ DP EPE ILVQS GM +W+ M L+++ G+ AN Sbjct: 4 FLLHASNRLENLAELLAEVLKT--PLDPMEPETILVQSGGMQRWVSMQLARRHGVCANTR 61 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 FP P F + + + ++P+E +++ M W++ LL LL+ +F L Y+ +DS+ Sbjct: 62 FPFPVGFAYALCRELRADLPREYPLSQERMLWRITHLLRGLLDEPEFAPLARYVQEDSE- 120 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL-----VEGLGEAQAWQAPLWKALVEYT 176 + QL+ + A FDQYL++RP+W A+WE + G ++AWQA LW+ L+ Sbjct: 121 LRSVQLAERIAYHFDQYLIFRPEWAARWENHEPSGNFLLPGHVASEAWQARLWRELIRDM 180 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 HRA L +R I +LE T+ P LPSRV + GI LPPVYL L+AL +H ++ Sbjct: 181 GG-----EHRAALLRRAIASLEKGTSLP-DLPSRVCVFGIPTLPPVYLDLLKALSRHSQV 234 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 H+ +PC+ YWGD+ + S E E + Sbjct: 235 HVFLLSPCQKYWGDLLTHRERRRAYRAGEHASPERPEDAMP------------------- 275 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 LA G +G++++ LL + + + E + + D +L +Q+D+L+L+ R Sbjct: 276 ---LAGLGAVGKEFLELLMERD-ALETGLYEEPVGDTMLGQLQADLLDLDVREEKTDF-- 329 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 D+SI H CHSP RE+E+L D +L +L +D +L+P+DI+VM DI+ Sbjct: 330 -------------SDTSIQVHCCHSPLREMEILKDLILDLLAKDTSLSPQDILVMNPDIE 376 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y+P IQAVFG+A D +P++ISDR+ ++ + F+ LL RF + V ALL+ Sbjct: 377 RYAPVIQAVFGTAGED-GIPFSISDRKPTKAAETIRLFLELLEFGQHRFEASRVCALLEA 435 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + R + + + +WV SG+RWG+D D R+ L GQ+TW GL+R+ LGY Sbjct: 436 PPVRQRLGLDASDTQRVLEWVRASGVRWGLDLDFRRKAGLGDFGQNTWESGLSRLYLGY- 494 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 M A + P EL+G + + + +L L R +W +L+ Sbjct: 495 MTGAADPLGGIAPLALRGSAEQELLGRVTAWIDELATLWSRLRDTRTPADWQDCLLWILD 554 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 AFF D + I + + + + L L+R RLD+ FLA Sbjct: 555 AFFPQDPAQAEHLLAIRKAVTDLTRDMGDFEADARTMLYLIRK----RLDESGGESGFLA 610 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 + C L PMRSIPF+V+CL G+ +PRQ PLGFDLM+ +P+ GDRS R+DDRYLF Sbjct: 611 SGLTFCGLKPMRSIPFRVICLTGLTSTAFPRQDIPLGFDLMAARPRPGDRSHREDDRYLF 670 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 LE++ISA+ L ++Y G S DN E PSVLV EL+D++ + + G Sbjct: 671 LESIISARDNLILTYPGLSQSDNLEAPPSVLVSELLDFLDRGCTVDG----------LTP 720 Query: 777 KAHLTCLHTRMPFDPQNYQPGER-QSYAREWLPAASQAGKAHS--------EFVQPLPFT 827 + H F P + G SY+ + AA H ++ Sbjct: 721 SEAIVFKHKLQAFHPDYFSAGSPIFSYSAQNRDAAQALFAEHQSRQFFPEASTLEGAHAE 780 Query: 828 LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI-LEGLSRYQINQQLLN 886 + +E L RF HP R + L+++ + + D EP GL Y Q LL Sbjct: 781 QEIEIDIEELTRFLTHPCRHLLRA-LRIDPTGGEDDFLDEEPLATPTGLEAYGPLQDLLR 839 Query: 887 ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEID-- 944 +++ A L A LP G G C +++ LAD+ A + + +D Sbjct: 840 TALDE-PAANLEGLLLAWQLLPPGQAGTDASRKLCSQIRALADQARAVIGDEKPLRLDLK 898 Query: 945 LACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDG 1004 L + +TG + + D + RP+ + ++LW+ HL A+G +S D Sbjct: 899 LPLGRITLTGRID-LHGDRFVTCRPAKTKSSDMLRLWVRHLAASATGHAVQSMHIGTDD- 956 Query: 1005 EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTL 1064 FP A A + L L+ Y GM AP+ + P + A+ + + + + Sbjct: 957 --CFPAPEAPNARNLLEGLLRLYTRGMRAPIHLFPRTSLAFAEARFTGRKPKERPE---- 1010 Query: 1065 QKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLF 1117 A + ++ +EG MV E DD L+R P E + ++ P+ Sbjct: 1011 --ALMQAMRQWEGGYMVSPERDDPHLAFLFRDTEP-DWERFADVAEEIYGPIL 1060 >UniRef50_A1KVC5 Exodeoxyribonuclease V n=23 Tax=Neisseria RepID=A1KVC5_NEIMF Length = 1069 Score = 829 bits (2141), Expect = 0.0, Method: Composition-based stats. Identities = 337/1129 (29%), Positives = 524/1129 (46%), Gaps = 93/1129 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +Y SNRL+ L AL I + + L +PE I+VQS GM ++L L++ G+AAN+ Sbjct: 1 MFYLYQSNRLETLAALFARIQKVKPLKSALQPEQIIVQSQGMRRYLNTCLARDLGVAANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLER--EDFTLLRHYLTD- 117 F LPA W + +++P IP+ S F + M W+L+ L R +F +R+ L D Sbjct: 61 SFSLPAGLTWKLMKKLIPGIPELSPFAPEVMRWRLLDLFRSEAFRNTAEFEDVRNVLQDY 120 Query: 118 -DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYT 176 S + +QL+ + AD+FDQYLVYRP W+ W+ G + GLG+ + WQ+ LW+ Y Sbjct: 121 LGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRRL-GLGDDEIWQSKLWR----YL 175 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 Q HR L+++ + L+ LP R F+ GIS + P+YLQ L L +H ++ Sbjct: 176 DDGRQSAPHRVALWEKLLAALDKDK-----LPERYFVFGISTMAPMYLQLLHKLSEHCDV 230 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 + NP YWG++ + A + K G Sbjct: 231 FVFALNPSGMYWGNVIEAAQILK--------------------------GGGDPDLTQAG 264 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 +PLLAS GK GRD+ L+++E E F + D LLH +Q+DI L+ + + Sbjct: 265 HPLLASLGKQGRDFFDFLNEMEIEGETPVFEEGGRDTLLHALQTDIQNLKMPSENVGS-- 322 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 ++ D SI HSP RE+++L D+LL +L E P P DI V+ I+ Sbjct: 323 ----------VNTGDGSIRIVSAHSPLRELQILKDKLLKILHEHPDWQPHDIAVLTPHIE 372 Query: 417 SYSPFIQAVFGSA-PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 SY+PFI+AVFG A P + LPY++SD + + P+ A L L +SRF + VL LL+ Sbjct: 373 SYTPFIEAVFGQAQPGAQALPYSVSDVKISRRQPLFHALSCLFDLLESRFEVDKVLVLLE 432 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 + RF +TE+ L L V + + WG+D + TW+ + RM+LG+ Sbjct: 433 TAPVLRRFGLTEDDLPLLHDMVADLNVHWGLDGEMRG----GTDQLFTWKQAVERMILGW 488 Query: 536 AMESA-QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 + WQ V + A L G A+LL L+ R Q + EW+ CRD+ Sbjct: 489 MLPEGGNPMWQDVSAWYADVNQTA-LFGRFAALLETLSDIVRIWRQPATIGEWVARCRDL 547 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 L F +A+ + ++ +E +W AE AQ+ +P + + + LD E F Sbjct: 548 LETLFQAEADDQKSVQNLENEWVKWQAETELAQFSGQLPQQTVIRHIRRFLDSESE-AGF 606 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 L G + C+++PMRS+PFKV+CLLG+NDG +PR FDL+++ P +GDR+RRDDDRY Sbjct: 607 LRGGITFCSMVPMRSLPFKVICLLGLNDGDFPRNTKAAVFDLIAKHPAKGDRARRDDDRY 666 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 LFLEALISA++ LY+SYIGR I+ + E PS L+ ELID + + + Sbjct: 667 LFLEALISAREILYLSYIGRDIRKDEELAPSSLLGELIDTVAAMAGIGSRQ--------- 717 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGERQS----YAREWLPAASQAGK-AHSEFVQPLPFTLP 829 + + H F + +Q G R ++ A Q + F QP+ P Sbjct: 718 -LAQNWIEQHPLQAFSRRYFQEGGRSDGIFGTRTDYATALGQTPEPPQPFFDQPVENAEP 776 Query: 830 -ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 + + RFW +PV+ + Q +L + EPF QI + + A Sbjct: 777 VAEIGQDEFIRFWRNPVKVWLQQQLAWSEPHIGEAWEPAEPFE--PQHADQIAETYIEAR 834 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN 948 E D + R A LP G G W+ Q + D + + + + Sbjct: 835 REGRDFAQTAARIGAESLLPSGELG-RLWQQNFQTAAKQIDTAVLNSPKLPPLSYAIPSD 893 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCA---SGGNGESRLFLRKDGE 1005 G + G L + G + + + Q + LEHL++CA S ++ Sbjct: 894 GQILKGSLGNLYRCGQVFYAYGKPNAPQRIAFLLEHLIFCAVMPSEAETRQTFIVQSGET 953 Query: 1006 WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQ 1065 +A ++AL LS+ + + G + PL ++ A + Q+ + Sbjct: 954 EILAEIAQDRALQLLSEWMAFFNIGQNRPLPFFAKTSLAAAEAFAQKQD---------WE 1004 Query: 1066 KARTKFLQAYEGNMMVRGEGDDIWYQRLWRQL--TPETMEAIVEQSQRF 1112 A K AY GN + +G+ D ++ P ++ Sbjct: 1005 AALKKAQTAYYGNKVSKGQKDYTEVALVFGNASQNPLEQPLFENLARLL 1053 >UniRef50_C8R0F3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0F3_9DELT Length = 1205 Score = 820 bits (2118), Expect = 0.0, Method: Composition-based stats. Identities = 387/1197 (32%), Positives = 569/1197 (47%), Gaps = 104/1197 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L +Y SNRL+ L + ++ + P E ++VQS GMA WL +L+Q+FGI A+ D Sbjct: 25 LILYRSNRLEALLDCLAASLQDDPPP-PLSSECVVVQSRGMATWLGQSLAQRFGIWAHPD 83 Query: 62 FPLPASFIWDMFVRVLPEIPKESA-FNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FP P FI + E + F+++ ++ ++ LLPQLL R +F LR YL +D Sbjct: 84 FPHPRRFIERLLRAAAGEEAATATSFSRELLTLAILELLPQLLSRPEFAPLRRYLEG-AD 142 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 K QL+ + A +FDQYLVYRP+ + WE + WQA LW+ L + Sbjct: 143 DWKSLQLAERIAYVFDQYLVYRPEMVLAWEDRQAEP--EDDDRWQALLWRQLAQRFGS-- 198 Query: 181 QPRWHRANLYQRFIETLESATTC-PPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 A L+ + L+ P LP+RVF+ GI+ LPPVYL L K + HLL Sbjct: 199 -----PARLFHQAKGRLQQGDLAQPELLPARVFLFGITTLPPVYLDLLNEAAKLLPCHLL 253 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 P R YWGDI P +LL R P +++ D G+PL Sbjct: 254 LFAPARDYWGDILSPKAANRLLLRHH---------PPAANADEQHGRDFEHLHLDTGHPL 304 Query: 300 LASWGKLGRDYIYLLSDLES---SQELDAFVDVT-----PDNLLHNIQSDILELENRAVA 351 LASWG++GR++ +++ + D FV+ ++L +Q DILEL+ A A Sbjct: 305 LASWGEVGREFQHIMEERAEYLQPAHGDCFVNPATVEVAGASILARLQRDILELQEPAPA 364 Query: 352 GVNIEEF----SRSDNKRPLDP-----LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 + +N+ P D SI H CHSP REVEVL D+LLAML+ Sbjct: 365 AADQRNSAGDSPNPNNRLPEQAAGAVDHDHSIVIHACHSPLREVEVLQDQLLAMLDV-EG 423 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSA-PADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 PRDI+VMV DI++Y+P I+AVF RY+P+ ++DRR + P+L+A ++LL L Sbjct: 424 YRPRDIVVMVPDIETYAPLIEAVFRRPTGDRRYIPFRLADRRVSREAPLLDALLNLLDLA 483 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 R VL L + F + L+ L QW+ + +RWGID+++ R + P Q Sbjct: 484 RGRLPLSQVLDFLAREPVRQGFGLDGRQLQRLEQWLEQLRVRWGIDEEHRRRHDQPPDRQ 543 Query: 522 HTWRFGLTRMLLGYAMESAQ-GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 +TWRFGL R++LGYA+ +LP+D+ G A+L G L L + + Sbjct: 544 NTWRFGLDRLILGYALPGEDRYLVAGILPFDDIEGQDAQLAGVLLQFSQALFSLVDEVRE 603 Query: 581 ERPLEEWLPVCRDMLNAFFLPDA----ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 + + W+ + R + AFF P+ + + A++ E A + L+ Sbjct: 604 AKTMARWVELVRRAMAAFFAPEERAAAGEQWQRQSLRDALVALLQESERAGLERPLELAA 663 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 L RLD+ ++ FL G + CT++PMR+IPF VVCLLGMNDG +PRQ P GFDL Sbjct: 664 FLRLLRARLDEAGMAAGFLEGGLTFCTMLPMRTIPFPVVCLLGMNDGDFPRQDNPAGFDL 723 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 ++ P+ GDRSRR DDRYLFLE+L+SA+++LYISY+GRSI+DN+E PS LV EL+D + Sbjct: 724 LAAAPRPGDRSRRRDDRYLFLESLLSARRRLYISYVGRSIKDNTELPPSPLVDELLDCLE 783 Query: 757 QSHYLPGDEALNCDESEAR---------VKAHLTCLHTRMPFDPQNYQPGE--RQSYARE 805 + + + + + +A H PF P+ +QP + +YA E Sbjct: 784 RMPEAVAESTADSEGTGEEERLADRRRRTRARFVVNHPLQPFSPRYFQPDQPLLFTYAAE 843 Query: 806 WLPAAS-------QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFR 858 + P S Q G P L L RF+ +P R + + L ++ Sbjct: 844 YAPVPSTRPVGTGQGGPDSPRPKAAATAPAPGAPTLAELHRFFRNPSRWYAEHHLGLSLP 903 Query: 859 TEDSEIPDTEPFILEGLSRYQINQQLLN------ALVEQDDAERLFRRFR----AAGDLP 908 + PD EP LE L Y++N+QLL A V + + RR R A G+LP Sbjct: 904 PGEEARPDREPVFLERLDAYRLNRQLLQDPASVLAAVNAGEDDEAGRRLRHLLAARGELP 963 Query: 909 YGAFGEIFWETQCQEMQQLAD--RVIACRQPGQSMEIDLACNG-VQITGWLPQVQPDGLL 965 ++ +A +P ++ +DL + + G L GLL Sbjct: 964 LAGAAAPALAEAMAAVEPVAAFLATNPAGRPLPNLPLDLELGQHLYLRGELRDRAELGLL 1023 Query: 966 RWRPSLLSVAQGMQLWLEHLVYCASGGNGESR---LFLRKDGEWR-------FPPLAAEQ 1015 RWRP + WL+HL CA + L R G+ F +A EQ Sbjct: 1024 RWRPGRSKPVFLLLAWLDHLALCARAPADQDHQCLLVARGKGQDEGQADIRIFRAVAQEQ 1083 Query: 1016 ALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAY 1075 A L+QL++ +R G APL P AW Y A+ D ++AR LQAY Sbjct: 1084 AQSLLAQLLDLWRRGQEAPLPFFPACSHAWSDKIYQAKE---SDPAKLCRQARQAALQAY 1140 Query: 1076 EGNMMVRGEGDDIWYQRLWRQLTP--------------ETMEAIVEQSQRFLLPLFR 1118 G G+G D + ++++ P E ++ LP+ R Sbjct: 1141 HGGDFHPGDGADPYVGLIFQEADPAGEWSEDDSSGPGGSDWEEFTAVAETVYLPMLR 1197 >UniRef50_Q1QYD4 DNA helicase/exodeoxyribonuclease V, gamma subunit n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYD4_CHRSD Length = 1210 Score = 817 bits (2111), Expect = 0.0, Method: Composition-based stats. Identities = 391/1208 (32%), Positives = 562/1208 (46%), Gaps = 100/1208 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M V H+N L+ L L ++ R R P PE LVQS GMAQWL++TL++ GIAA++ Sbjct: 1 MFSVIHANHLEDLGTLALDVIRRHR-QPPLVPETFLVQSNGMAQWLRLTLAEADGIAASV 59 Query: 61 DFPLPASFIWDMFVRVLPE-IPKESAFNKQSMSWKLMTLLPQLLERED-------FTLLR 112 DFPLP+SF+W + VL + IP++S F+K ++W+LM LL + L+ E + LR Sbjct: 60 DFPLPSSFVWRAYRAVLGDDIPEQSPFDKTPLAWRLMALLERCLDPETSPDDPTCYAPLR 119 Query: 113 HYLTDDSDK-------------RKLFQLSSKAADLFDQYLVYRPDWLAQWETGH-LVEGL 158 YL ++ + R+ + L+ + ADLFDQYL+YRP+W+ WE G L Sbjct: 120 DYLQGEALEASPLPGAAEEARERRRWHLAVRLADLFDQYLIYRPEWIEAWERGEHAPADL 179 Query: 159 GEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA 218 + Q WQ LW+AL+E HRA L++RF++ P +P RVF+ GISA Sbjct: 180 PDDQRWQPALWRALIEDA-PAAAREHHRARLHRRFLDAARGLRKRPRDVPPRVFVFGISA 238 Query: 219 LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFR 278 LP L+AL AL +++ L+ NPCR+YWGDI K R S RE Sbjct: 239 LPAQTLEALHALSGVVDVFLMIANPCRHYWGDIVSDRDAIKRAGRL--SSQARREQEARH 296 Query: 279 DSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ----ELDAFVDVTPDNL 334 + + NPLLA WG GRD+I L + ES + E D F D+ P+ Sbjct: 297 PEAPWLAELDEEALHLHANPLLAGWGTQGRDFIVGLYEFESDRGFDLETDVFRDMAPE-- 354 Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 + ++ E R R + D S++ HSP REVE+LHDRLL Sbjct: 355 -QSPTLLQQLQQDVLELVHPGERARREGGPRRIAEDDESLSLVSAHSPLREVEILHDRLL 413 Query: 395 AMLEE----DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA--DRYLPYAISDRRARQSH 448 A E L PRDIIVMV DID Y+P I+AVFG P R++P+ I+D+ A ++H Sbjct: 414 AAFERAEAAGQPLRPRDIIVMVPDIDRYAPCIEAVFGQLPPSHPRHIPFTIADQVASEAH 473 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 P++ + LL LP+ R +VL L+VP F I E L LRQW+ SG+RWG+ Sbjct: 474 PLMALALLLLELPERRLTVSEVLDALEVPAFRTAFAIDEAELERLRQWLAGSGVRWGLSA 533 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQ-----------------GEWQSVLPYD 551 ++ L PA G+++WRFGL+RMLLGYA+ G++Q ++PY Sbjct: 534 EHRDSLGFPALGENSWRFGLSRMLLGYAVGEPSAGGARDDSEDSLGHAPSGDFQGIVPYA 593 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA-MT 610 E GL A+L G +A+LL L L + WL + + A P E M Sbjct: 594 EVGGLEADLAGRVATLLSTLEQQCAALGERLTPMAWLGRLQALFAACLQPGTADEHDVMA 653 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 ++ + A + + V L ++RD L LD+ ++QRFLAG VN TLMPMR+I Sbjct: 654 RLDAALARWAQQCRHADFEEPVGLGVVRDALRAELDEGGLAQRFLAGKVNFATLMPMRAI 713 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 PF+ V LLGMNDG YPR P FDLM+ +P+ GDRSRRDDDRYL LEA++SA+ KL +S Sbjct: 714 PFREVYLLGMNDGDYPRVRQPQDFDLMATRPRPGDRSRRDDDRYLMLEAMLSARAKLTLS 773 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 ++G ++DN+ R PSVL+ EL+D + Q +P D A + D AR+ L H PF Sbjct: 774 WVGHDVRDNTPRPPSVLIGELLDTLEQGWDVPEDGAGSRD---ARLARRLIETHPLQPFS 830 Query: 791 PQNYQ-PGERQSYAREWLPAASQAGKAHSEFVQPLPFT-------LPETVPLETLQRFWA 842 + ++ R +Y W + + P E + L LQR Sbjct: 831 RRYFERDDPRFTYEASWEALYATPEDTAAATADGAPSPDASMASLPDEPLSLGDLQRVLR 890 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFR 902 P + RL V++ D EPF L+GL + + ++LL+ + R R Sbjct: 891 RPWTVYL-GRLGVHYVDPHVPDEDNEPFALDGLEDHGLKRELLDGARGGVALASVAERLR 949 Query: 903 AAGDLPYGAFGEIFWETQCQEMQQLADRVI----ACRQPGQSM-EIDLACNGVQITGWLP 957 AG LP FGE E + + + + AC + + + + L Sbjct: 950 LAGRLPTAGFGEALIEPRLARLSRQVESWRRDVAACTAASPFLARFQGGASALTLEARLD 1009 Query: 958 QVQ--------PDGLLRWRPSLL---------------SVAQGMQLWLEHLVYCASGGNG 994 V P L+ P V + +L L+ A+ Sbjct: 1010 DVFAAPEDGAAPWCLMTLEPGHYGHLKVEGTGPHRHVGKVHRLYGGYLRWLLANATLEAP 1069 Query: 995 ESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQN 1054 S + +D P +AA A L+ ++ + P + E K Sbjct: 1070 CSWTAVFEDRCLSLPGMAAATARQQLATWLDAWARAYRMPWPAIGEVAQEIWKRVPRETC 1129 Query: 1055 DAMLDDDSTLQKARTKFLQAYEGNMMVRG---EGDDIWYQRLWRQLTPETMEAIVEQSQR 1111 +A+ + R + YE + D +LW V S Sbjct: 1130 EALQAGEPLESGLREALIARYETDAYAGPAALRARDGALGQLWPDFAAFEAAGGVAASLT 1189 Query: 1112 FLLPLFRF 1119 PL Sbjct: 1190 LYAPLLDM 1197 >UniRef50_C5TL47 Exodeoxyribonuclease V, gamma subunit n=3 Tax=Neisseria RepID=C5TL47_NEIFL Length = 1099 Score = 816 bits (2108), Expect = 0.0, Method: Composition-based stats. Identities = 315/1137 (27%), Positives = 517/1137 (45%), Gaps = 99/1137 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M ++ S+RL+ L + I + LD E ++VQS GM ++L + +++ G+AAN+ Sbjct: 1 MFYLFQSDRLESLAEMCARIHQASPLDSVLAQEEVVVQSQGMRRYLNVFFARELGVAANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLER--EDFTLLR----HY 114 F LPA W + +++P++P S F+ + M W+L+ L + + ++ +R Y Sbjct: 61 KFSLPAGLAWQLMRKLVPDVPPLSPFSPEVMRWRLLDLFRSEMFQTAPEYENVRLKLESY 120 Query: 115 LTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 L + +QL+ + AD+FDQYLVYRPDW+ W+ G L+ GLG+ + WQA LW+ Sbjct: 121 LYSSASAD--YQLAGQMADIFDQYLVYRPDWIDAWQAGKLL-GLGDDEDWQARLWR---- 173 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 Y Q HR L+++ + L+ LP R+F+ GIS + P+YLQ L + KH Sbjct: 174 YLDDGSQSALHRVALWEKLLAQLDK-----SVLPQRLFVFGISTMAPMYLQLLHQISKHC 228 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 ++ + NP YWG++ D A + K + Sbjct: 229 DVFVFALNPSSQYWGEVIDEAQILKR--------------------------GDEADLSQ 262 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 G+PLLAS GK GRD+ LS++E+ Q++ + + D LLH +Q DI L + Sbjct: 263 AGHPLLASLGKQGRDFFDFLSEVETEQDIQVYEEGKDDTLLHCLQKDIQNLIMPSERLYQ 322 Query: 355 IEEFSRSDNKRPLDP----------------LDSSITFHVCHSPQREVEVLHDRLLAMLE 398 EE + + D S+ HSP RE+++L + L +L+ Sbjct: 323 QEEGEAGGQQALVQVHDADGNPVCVEPDKLLNDGSVKIVAAHSPLRELQILKEELSLVLQ 382 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP-ADRYLPYAISDRRARQSHPVLEAFISL 457 +P P DI V+ +I+ YSPFI+AVFG A + LPY+ISD + + P+L A Sbjct: 383 NNPDWQPHDIAVLTPNIEPYSPFIEAVFGQAHAGSQALPYSISDVKLSRRQPLLYALAQT 442 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L L +SRF + VL LL+ ++ RF ++EE + L + V + WG+D Sbjct: 443 LDLLESRFEVDKVLPLLESRLVLQRFGLSEEDVPLLHETVAGLNVHWGLDQTMRD----G 498 Query: 518 ATGQHTWRFGLTRMLLGYAMESA-QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 TW+ + R+ LG+ + G W+ V + + ++ A + L Sbjct: 499 KDNLFTWQQAVERLALGWMLPEGGNGMWRGVSAWYSNVN-QLDVFSGFAEFIRTLADMAA 557 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 +E W+ CRD+L F PD + + A EQ E A++ +P Sbjct: 558 QWQAPANVEIWVQRCRDLLEKLFAPDTDDQYAKQQFEQSLAKWQEEAQLAEFDGLLPCKT 617 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + + + LD E FL+G + C+++PMRS+PFK+VCLLG+NDG +PR FDL Sbjct: 618 VIRHIRRFLDSES-QAGFLSGGITFCSMVPMRSLPFKMVCLLGLNDGDFPRNTKAAVFDL 676 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 +++ PK+GDR+RRDDDRYLFLEALISA++ LY+SYIGR I++++E PS L+ EL+D I Sbjct: 677 IAKHPKKGDRARRDDDRYLFLEALISAREMLYLSYIGRDIRNDAEFAPSSLISELLDTIA 736 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE----RQSYAREWLPAA-S 811 +S + H F + +Q S +++ A Sbjct: 737 A----------MTGKSGRELSEKWVKHHPLQAFSRRYFQKDALSDGLFSTRQDYADALNQ 786 Query: 812 QAGKAHSEFVQPLPFTLP-ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 +A F++ L P +T+ L FW +PV+ + + L + D EPF Sbjct: 787 PPAEAQPFFLEALSQEEPGKTIHQGELVSFWRNPVKVWLKKNLSWDQPYLDGAWESAEPF 846 Query: 871 ILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR 930 +I L+A + +D E R A +P G G W+ Q Q + D Sbjct: 847 E--PQHEGRIADAYLDARRKGEDFEDTAIRLNAESLMPVGELG-GLWQKQYQISAKNVDT 903 Query: 931 VIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCAS 990 + S + + + + G + + G + + + + LEHL++CA Sbjct: 904 ELIRSNKRPSEPYEESFGDLVLQGTIGNLYECGRIVFLNQKDNAPNRIARLLEHLIFCAV 963 Query: 991 GG---NGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLK 1047 + + + E A L + + +R G + PL ++ A + Sbjct: 964 APKSVANRQTHIVSLGQTETYAAIGQEAARELLKEWLVYFRIGQNTPLPFFAKTSLAAAE 1023 Query: 1048 TCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEA 1104 A K + + GN M +G+ + + ++ L ++ Sbjct: 1024 EYNKK---------EDWDAALRKAHEVFNGNKMSKGQKEYTEVKLVFGHLEESPLDE 1071 >UniRef50_D0IXL5 Exodeoxyribonuclease V, gamma subunit n=4 Tax=Comamonadaceae RepID=D0IXL5_COMTE Length = 1195 Score = 800 bits (2066), Expect = 0.0, Method: Composition-based stats. Identities = 350/1194 (29%), Positives = 536/1194 (44%), Gaps = 120/1194 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L H N+ + L + + L EPE++LVQS GMA+W +M ++++ G+ A Sbjct: 20 LIAIHGNQTEALADTVLAWLAAHPLQA-LEPEIVLVQSNGMAEWFKMRMAEQQGVCAAAQ 78 Query: 62 FPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 LPA F+W + ++L E+P+ES +K M W+LM LLPQ L F + ++L Sbjct: 79 VELPARFVWRSYRQILGRHEVPRESPLDKTPMIWRLMRLLPQCLGEPAFAPIANFLRPG- 137 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEAQAWQAPLWKA 171 + ++L QL+ K ADLFDQY +YR DWLA WE G V + E Q WQ LW+ Sbjct: 138 EPQRLLQLAEKLADLFDQYQIYRADWLAAWEKGEDVLRTAGRPDAPVPEGQLWQPQLWRK 197 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 ++ + + R L R ++ L+S L RV + G+S +P +Q L + Sbjct: 198 VLAELDEQ-ERAATRPALLARILDALQSGQPPVTPLARRVVVFGMSQMPLSLMQFLSGIA 256 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 +H ++ + NPCR++W D D L + R+ Sbjct: 257 QHSQVLIAVPNPCRFHWADAIDGRELLRQQRRRHADKGG-----------KDLAQIPLAA 305 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQEL---------DAFVDVT-----PDNLLHN 337 +PLLA+WG+ RDY+ L +++ ++ D + + LL Sbjct: 306 MHAHAHPLLAAWGRQSRDYVRQLDAFDTTGDIAVQWGWPRVDVYDEADASELIDAPLLVQ 365 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 +Q I +L + + D SI FH H RE+EVLHD+LL L Sbjct: 366 VQQRIRDLVPMSEH-----------PAVEIAAADQSIVFHKAHGLVRELEVLHDQLLQWL 414 Query: 398 EEDPT-----LTPRDIIVMVADIDSYSPFIQAVFGSAP--ADRYLPYAISDRRARQSHPV 450 E L PR+++VM+ I+ +P I+AVFG R++P+ I+D AR S P+ Sbjct: 415 AEPAAAGRAVLAPREVVVMLPSIEEAAPAIRAVFGQYGRHDARHIPFDIADVGARASSPL 474 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 + A LL LP R ++ LLDVP +AAR + + L L W+ +GIRWG++ Sbjct: 475 VTALQWLLKLPQQRCRLSELCDLLDVPAVAARVGLAADDLPQLTHWMAGAGIRWGLNHAQ 534 Query: 511 VRELELPAT-GQHTWRFGLTRMLLGYAME-------SAQGEWQSVLPYDESSGLIAELVG 562 +L L A ++ FGL RMLLGYA + + PYDE GL AEL G Sbjct: 535 RAQLGLAACGDPNSAWFGLRRMLLGYASGPALEAAFDEAQVFAGMEPYDEVGGLTAELAG 594 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM-TLIEQQWQAIIA 621 LASLL ++ W + A E W R +++ FF+ + + A+ ++ A Sbjct: 595 SLASLLGRMLQWWQTAATAAAPEVWAQRFRSLMDDFFVAQGDEDQALCAALDTALVGWQA 654 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 A + +PL + ++ Q L + ++QRF AG V CTLMPMR+IPF+VVCLLGMN Sbjct: 655 ACEQAGFEALIPLEVAQEAWLQALSEPALNQRFRAGGVTFCTLMPMRAIPFEVVCLLGMN 714 Query: 682 DGVYPRQLAPLGFDLMSQ--KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 DG YPR+ + FDLM+ + + GDR+RRDDDR L L+AL+SA+ KLYIS+ GR ++DN Sbjct: 715 DGDYPRRATRVDFDLMALPGQQRPGDRARRDDDRQLMLDALLSARSKLYISWAGRHVRDN 774 Query: 740 SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY-QPGE 798 SE+ PSVLV +L DY+ Q L+ E + A T H PF + Q Sbjct: 775 SEQPPSVLVSQLRDYLRQGWQGEDSAGLSASERGELLLAQRTRQHPLQPFSRSYFEQASG 834 Query: 799 RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFR 858 ++AREW A + V + L L F HP R+F + RLQV F Sbjct: 835 LSTFAREWYGAHEERAAQVLPVVAAFEPDPEVPLTLARLTEFLRHPARSFLRNRLQVRFE 894 Query: 859 TEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF----------RRFRAAGDLP 908 ++ + D E F ++GL+ Y + QQL + Q + + AG LP Sbjct: 895 QDEELLEDDELFSVDGLTAYGLIQQLQQGVRTQLAHDAELDVGLQVQRQVQCLGRAGVLP 954 Query: 909 YGAFGEIFWETQCQEMQQL----ADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPD-- 962 G E + ++ + L V + W+ +Q Sbjct: 955 LAGLGRREAEVLQAQATPSLLAWQQQMRLWPHAAPRERLLLHSGAVTLDDWMDGLQEREE 1014 Query: 963 ----------------GLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEW 1006 L + L + + +++ L ++G + + +D Sbjct: 1015 PSSDAGHSRCWFALEPRTLLNKKGELQAHKLLPIYVRSLALSSTGSDTLMGVI-ARDTLV 1073 Query: 1007 RFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQK 1066 PL E A L L++ + G + PL + ++ A + Sbjct: 1074 WVQPLEPEAATQRLQALMQLWLTGQNEPLPLPLKAAIA------------------AGRD 1115 Query: 1067 ARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETME-AIVEQSQRFLLPLFRF 1119 QAYEG M+ GE +D + R + T + +++ PL + Sbjct: 1116 ELNAAAQAYEGGYMLGGECEDPSWARCYPDWEALTADLRFHVLAKQVYGPLHDW 1169 >UniRef50_C4ZM87 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Thauera sp. MZ1T RepID=C4ZM87_THASP Length = 1218 Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats. Identities = 363/1243 (29%), Positives = 541/1243 (43%), Gaps = 181/1243 (14%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 H NR++ L + + + L P E E+ILVQS GMA+W++M ++++ G+ A Sbjct: 18 FIALHGNRIETLLDTVAGWLAQHPLA-PLESEVILVQSNGMAEWVKMAIARRAGVCAAAA 76 Query: 62 FPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 LPA F W + +VL +P S +K +++W+LM LLP++L F + YL D+ Sbjct: 77 VQLPARFQWQTYRQVLGRAQVPARSPLDKTALAWRLMRLLPEVLAEPGFAPVAGYLADN- 135 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL------------------------V 155 D + FQL+ + ADL+DQY V+RPDWL W G Sbjct: 136 DPGRRFQLALRIADLYDQYQVHRPDWLDAWGEGREALPDAGRGETPLTGRGETPLAGRGE 195 Query: 156 EGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLP-----SR 210 L E Q WQA LW+ +V+ Q R L+ R + L++ P R Sbjct: 196 TPLPEDQRWQARLWQRVVDEL-DPQQRALTRPQLHDRVLAALDAIAEDAALHPAAALPRR 254 Query: 211 VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFE 270 V + G++ +P LQ L AL +H ++ L NPCR++W DI D ++ R++ Sbjct: 255 VVLFGMTHVPLPTLQLLAALSRHAQVLLAIPNPCRFHWADILDGREWLRIARRRQPLRDG 314 Query: 271 DRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE-------- 322 Q D +PLLA+WG+ RD++ L + +++ Sbjct: 315 RE-----------LQDVGLDAMHLHAHPLLAAWGRQARDFVRQLDAFDDAEQTRARFPLA 363 Query: 323 -LDAFVDV------TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSIT 375 +D F D LL +Q I +L A P+ D SI Sbjct: 364 RIDLFDDDQDTHDVAQPTLLVQVQRHIRDLTPLAEHPH-----------PPVPAEDRSIV 412 Query: 376 FHVCHSPQREVEVLHDRLLAMLEE---DPTLTPRDIIVMVADIDSYSPFIQAVFGSAP-- 430 FH+ HSP RE+E+LHD+LLA+L D L PRDI+VMV ID ++P I+AVFG Sbjct: 413 FHLAHSPVRELEILHDQLLALLARPPGDKPLRPRDIVVMVPSIDDFAPAIRAVFGQYGRH 472 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 R++P+ I+D AR S P++ A LL + R D+ ALLDVP +AARF + EEGL Sbjct: 473 DPRHIPFDIADLSARASSPLMGAVEWLLRIRHDRCRLSDLGALLDVPAIAARFGLAEEGL 532 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPAT-GQHTWRFGLTRMLLGYAME----SAQGEWQ 545 L W+ +GIRWG+D + L L A Q++ FGL RML+GYA + + Sbjct: 533 PRLTGWMRGAGIRWGLDARHRAGLGLQACGEQNSALFGLRRMLMGYAAGRSEVTTDAPFA 592 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF-LPDAE 604 + PYDE GL AEL G LA L+ +L W+ + W R +L D Sbjct: 593 GIEPYDEVGGLDAELAGALAHLVERLIRWQADSRRPATPAAWTQRLRALLADLVRAVDDT 652 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 + ++ + + A + +PL++ + L+ + +RF AG V CTL Sbjct: 653 DRQTLAALDDALERWLEACDEAAFEAELPLAVAAEAWLAALESPALDKRFRAGGVTFCTL 712 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ--KPKRGDRSRRDDDRYLFLEALIS 722 MPMR+IPF+VVCLLGMNDG YPR+ FDLM+ + + GDR+RRDDDR L LEAL+S Sbjct: 713 MPMRAIPFEVVCLLGMNDGDYPRRSPRSDFDLMALPGQQRPGDRARRDDDRQLMLEALLS 772 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 A++ LY+S+ GR+++DNS + PSVLV +L DY+ V A T Sbjct: 773 ARRVLYLSWCGRNVRDNSVQPPSVLVAQLRDYLAAGW-------------SPAVVAERTV 819 Query: 783 LHTRMPFDPQNYQPGE-RQSYAREWLPAA---------------------------SQAG 814 H PF + ++PG +YAREW A G Sbjct: 820 EHPLQPFSRRYFEPGTPLLTYAREWRAAHVEAAAQDDAVPSHDGQANREATGRATRPTRG 879 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 +A S + P + + L F +PV+ FF+ RL V + D +PD E F +G Sbjct: 880 EAASPPLPPFVPDPAVPLTIAALAAFLRNPVKVFFRERLGVVYEDVDEALPDDEAFGFDG 939 Query: 875 LSRYQINQQ---------------LLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET 919 L + + ++ L+A + E R AG LP G G Sbjct: 940 LEEHGLVEELAAAVLADLALLPPPELHAFALEAAVEAQLGRIERAGRLPIGGLGLRARAA 999 Query: 920 QCQEMQQLADRVIACRQPGQS-------------------MEIDLACNGVQITGWLPQVQ 960 + + L R ++ + + + WL Sbjct: 1000 LGEAVLPLLRAWRLVRASHPLDAERGNLRFAHAGALMEDWLDHRVRADEHALPSWLAHDP 1059 Query: 961 PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL 1020 L L + + W+ L+ A+ L + +D P A L Sbjct: 1060 GRLLEDADKGTLRPWRLLLPWVRSLLAAAADS-PSGGLLVGRDATVHIVPTDPAVARALL 1118 Query: 1021 SQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMM 1080 ++LIE + G+ PL V + A + K +AYEG+ Sbjct: 1119 ARLIEAWIAGLGEPLPVAARTALALV--------------------GEGKPAEAYEGSEH 1158 Query: 1081 VRGEGDDIWYQRLWRQLTPETME-AIVEQSQRFLLPLFRFNQS 1122 RGE ++ R + + ++ PL + S Sbjct: 1159 RRGEVEEASLARCYPDYAALIEDGRFEHLARALYGPLLEWMDS 1201 >UniRef50_Q60AZ6 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Methylococcus capsulatus RepID=Q60AZ6_METCA Length = 1138 Score = 793 bits (2048), Expect = 0.0, Method: Composition-based stats. Identities = 321/1191 (26%), Positives = 515/1191 (43%), Gaps = 133/1191 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L ++ SNR ++L + + + DPF E ++V S + + L++ + +FG+ AN++ Sbjct: 5 LNIFFSNRFEILTQRLFDDLAQGP-ADPFVAEQVIVPSLAVRRRLELDHADRFGVCANVE 63 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 F A ++W +V+ E+ S F +++W++ +L + L+ YL +D Sbjct: 64 FSYLAHWLWVQIGQVI-EVGASSPFAPATLTWRVFRMLGEEALVSAHPRLKSYLA-RADG 121 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGE----AQAWQAPLWKALVEYTH 177 F L+ + A L +QYL YRPDWLA W G GL E +AWQA W+ LV+ Sbjct: 122 AMRFDLAQRVAHLLEQYLTYRPDWLAAWLEGRPASGLPEASREDEAWQAAFWRTLVDELE 181 Query: 178 QLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIH 237 R H + + R +E + T GLP+R + + +PP+YL L L + E+H Sbjct: 182 V---RREHPSAAFFRAVEAMGPEATRRAGLPARAHLFCLPTIPPLYLDILGKLARWTELH 238 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 L NPCR YW DI DP L L R ++ GN Sbjct: 239 LYVLNPCREYWFDIVDPRRLNYLEVR------------------------GDALYRETGN 274 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELD--AFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 LLA+WG+ + +I LL D +D F +LL +Q IL+L + Sbjct: 275 RLLANWGQQTQAHIDLLFDKAEGAVIDDAQFEPPARISLLAAVQEAILDLRDPEPGCCAS 334 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 D SI HVCHS RE+EVLHD+LLA+L DI+V++ + Sbjct: 335 V------------AGDRSIEVHVCHSLVRELEVLHDQLLALLARPDAPKVSDILVVMPRL 382 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 + +P I AVFG+APA R +PYAI+ R ++P A ++LL L SR + V L Sbjct: 383 EEAAPLIDAVFGTAPAARRIPYAITGLRRTVANPAAAALLTLLGLFASRCKASAVYEFLQ 442 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 P++ ARF + + L + W +GIRWG++ + + + LP +H++ GL R+ LGY Sbjct: 443 RPLVHARFGLGLDDLECIHDWFQAAGIRWGLNGAHRKAVGLPEVERHSFCDGLDRLFLGY 502 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 A+ ++ LP G A +G A + L W R + + W ++ Sbjct: 503 ALGDVPVQFDGRLPAGSPEGSEALALGGFAHFVDLLTHWHRVWSTPATAQTWGERLNAVV 562 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 AF + ET + + + A+ A + ++R L LD Sbjct: 563 GAFLMETPETVPDLQEVREAIAALSRHWGEAAVTGTIEPEVVRVALESLLDD-PARGGTP 621 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 +G + + +RS+P++VVC++G+NDG +P P FDL++Q P+RGDR RR D+R L Sbjct: 622 SGRLTFTAMASLRSLPYRVVCVIGLNDGEFPHPDRPAEFDLIAQAPRRGDRQRRYDERNL 681 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 FL+ L++A+++LY+SY GRS++DN+ PS + + ES Sbjct: 682 FLDLLLAARERLYLSYTGRSVRDNAPLPPST-------LLSELLDYLLPLVAAAGESPEE 734 Query: 776 VKAHLTCLHTRMPFDPQNYQP-----GERQSYAREWLPAASQAGKA-------------- 816 + L H F P + S+ E+ A A Sbjct: 735 ARRRLVVEHPLQAFSPVYFDAAVAKDPRLVSFNSEYCEALRAARSPRPSGEGVRACESHS 794 Query: 817 ------------------------------------HSEFVQPLPFTLPE--TVPLETLQ 838 F P+ PE L+ L+ Sbjct: 795 QEPEECSAILAERERADHGPAGPIAGEEQNDPDFEHAPFFPAPMAAPEPEWREPNLDVLK 854 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF 898 RF+ +P R + RL + ++E+ D EPF+ +R ++ ++LL ++ E + Sbjct: 855 RFFRNPCRYLLEQRLGLTLAEGEAELADDEPFLPAYFARGEVAERLLPLMLSAATEEAVE 914 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ------SMEIDLACNGVQI 952 RA + P G GE+ + + +++ A+R+ Q + + + Sbjct: 915 VVARAGIEFPQGQLGELLLKGELTRIREYAERIAGQTQEEPLQPLPGRLAFQIEGETWTL 974 Query: 953 TGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASG--GNGESRLFLRKDGEWRFPP 1010 +G L QV GL+RWR + WL+HL A G + ++ +DGE+R P Sbjct: 975 SGALGQVWRRGLVRWRYDDTRPVDYLSGWLDHLFLNALAVRGVEPTTTWISRDGEYRLRP 1034 Query: 1011 LAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTK 1070 +AA A L +L+ YREG+ PL P S A Q A + Sbjct: 1035 VAA--AQERLRELVALYREGLRLPLHFFPRSAWACALGLKQG----------GSQAAERQ 1082 Query: 1071 FLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 + +EG+ RGE +D+ Y++ R A + PL + Sbjct: 1083 ARKRWEGSGDRRGESEDLAYRQALRGQADPLDGAFFRTVRTVFGPLLDHLE 1133 >UniRef50_B5JRL4 Exodeoxyribonuclease V, gamma subunit n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JRL4_9GAMM Length = 1150 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 379/1187 (31%), Positives = 567/1187 (47%), Gaps = 135/1187 (11%) Query: 13 LEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-----FGIAANIDFPLPAS 67 + L L P E+ LVQS GMAQWL++ ++ GI A F +P+ Sbjct: 1 MLKLAINWQAEHPLP-PLAEEVFLVQSNGMAQWLKLNIAADREDGGLGIQAGQRFEMPSR 59 Query: 68 FIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK---R 122 F+W + VL +P S ++K ++ W+LM LLP+L+E + F +LRHYLT D + R Sbjct: 60 FLWSAYRAVLGNDKVPTASPYDKATLQWRLMRLLPELVEDDAFRVLRHYLTSDDETVATR 119 Query: 123 KLFQLSSKAADLFDQYLVYRPDWLAQWET---------GHLVEGLGEAQAWQAPLWKALV 173 K +QLS + AD FDQY VYR DWL W G L WQA LW+ L+ Sbjct: 120 KRYQLSQQLADTFDQYQVYRADWLEDWAQQRDRLSRFGGQQARALPAEDHWQAQLWRRLI 179 Query: 174 EYTHQLGQPR---WHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL 230 + P R +++RFI+ L S LP R+ + G+S+LP L+AL A+ Sbjct: 180 DDIETDSTPSHSVLSRGQIHRRFIDALHSGRDYSAYLPPRITVFGLSSLPYQTLEALAAM 239 Query: 231 GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 G H ++ L+ NPC++YWGDI+ + A + + Sbjct: 240 GLHTQVMLMVHNPCQHYWGDIR-----------------------QHAPTRQAVKDAVAA 276 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQE-------LDAF---VDVTPDNLLHNIQS 340 + PLLA+WG+ GRDY+ LL++ + ++ +D F D LL Q Sbjct: 277 EHSESEQPLLATWGQQGRDYLQLLAEFDQPEDYQQHFEKIDVFNSPADNASPTLLQQWQH 336 Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 I +L++ + + S D S+ FH CHS QREVEVLHD+LL E + Sbjct: 337 SIYDLQSLPEEKNILSKDSL--------EGDRSLRFHSCHSAQREVEVLHDQLLDAFERN 388 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSA-------PADRYLPYAISDRRARQSHPVLEA 453 P L P+D+IVMV DI Y+P I+AVFG RYLPY ISD + ++P + A Sbjct: 389 PALRPQDVIVMVPDIQRYAPHIEAVFGLYKPRTGQERDPRYLPYTISDSSLKSANPTVNA 448 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 LL RF D+L LL+ P L RF + L+QW+ ++G+RWG++ + + Sbjct: 449 IEQLLHSDQLRFSLSDILGLLESPALQRRFGLENSDPSLLKQWLEQAGVRWGLNREQRAQ 508 Query: 514 LELPATG--------QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 +LP+ +TW FGL R+LLGY+ E+ W + P S AE +G L Sbjct: 509 HDLPSESSEPSEALSANTWAFGLNRLLLGYSSEAR---WNGIEPSAPFSNSDAEAIGALW 565 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVC-RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 L+ L+ + + L + +W + +L F D + + + Sbjct: 566 RLINTLDGFSQSLQHAKTPSQWSQFIGQTLLEFFDSDDDSDAPLFDALNHALEQWLDACQ 625 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 A + DA+PLS++R+EL LD ++QRFLAG +N +LMPMR++PFK+VCLLG+NDG Sbjct: 626 RADFNDAIPLSMVREELLPALDDSGLNQRFLAGCINFASLMPMRAVPFKMVCLLGLNDGD 685 Query: 685 YPRQLAPLGFDLMSQKP--KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 YPRQ FDLM ++ + GDRSRRDDDRYLFLEA +SA++ LY+S++GRSI+DNS R Sbjct: 686 YPRQQPRQDFDLMRRREHYRPGDRSRRDDDRYLFLEAALSAREALYLSWVGRSIRDNSVR 745 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN---YQPGER 799 S+L+ +L D I L ++ + +LT H P+ Q + Sbjct: 746 AQSILLAQLRDDIAARFQLDN-------DAHPTLLEYLTLEHPLQANSPRYLDTLQSAQY 798 Query: 800 QSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRT 859 +YAREW + + + ++ + +T+ L L+ P F + RL++ F Sbjct: 799 FTYAREWFDEPRSSDRNTT--LKAIDSNEAQTLSLSDLRLLLRQPCDVFLRQRLKIAFDD 856 Query: 860 EDSEIPDTEPFILEGLSRYQINQQLLNALVE-------QDDAERLFRRFRAAGDLPYGAF 912 D + D EPF L+GL RYQ+ Q LL + +R R+ ++G LP G F Sbjct: 857 GDDSVLDHEPFSLDGLDRYQLGQSLLEDGAQDLSPSGLNAALDRAKARWLSSGQLPPGEF 916 Query: 913 GEIFWETQCQEMQ----QLADRVIACRQPGQSMEIDLACN-GVQITGWLPQVQPDG---- 963 G E + ++ + ++ A QP I LA G + W ++ Sbjct: 917 GLTLIEQRLDDVADTLSRYREQSQALIQPLPPQAIVLADELGWTLEDWTRELASTASGTP 976 Query: 964 ---LLRWRPSL------LSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAE 1014 + P L + + WL HL + G L L ++G R P+ AE Sbjct: 977 HYYQINLTPGTLRSGRQLKYHRLLNDWLNHLAASSLG-YSLHTLILCEEGGVRISPMPAE 1035 Query: 1015 QALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQA 1074 QA HYL QLI YR ++ PL + E+G A+ T A+ + ++AR++ A Sbjct: 1036 QAAHYLKQLISAYRNALAQPLPIQLEAGCAYAHTLATAKANHE-------EQARSEAQNA 1088 Query: 1075 YEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 YE + + ++ LW E + + PL Q Sbjct: 1089 YESRLSASQQRCYASFEVLW-----EHSGEFLRWMETLYQPLVEHTQ 1130 >UniRef50_Q480N8 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Colwellia psychrerythraea 34H RepID=Q480N8_COLP3 Length = 1198 Score = 790 bits (2041), Expect = 0.0, Method: Composition-based stats. Identities = 330/1201 (27%), Positives = 559/1201 (46%), Gaps = 150/1201 (12%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M+ +Y +N+++ L L+ I + L F E+I+VQ+ GM WL + ++Q+ GI+ N+ Sbjct: 1 MIHLYPANKMENLLLLLNKISQLSPL-GVFNQEVIVVQNAGMQHWLNLAIAQERGISMNM 59 Query: 61 DFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLL--PQLLEREDFTLLRHYLT 116 + LPA F+W + + + +P++S ++++ + W++ LL ++E +DF+ HY Sbjct: 60 RYALPAQFLWKLIRSLASDEKVPEQSPYSREVLCWRIHALLALDSVVEDDDFSQATHYWR 119 Query: 117 DDSD---------------KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGH-LVEGLGE 160 ++ + K +QL+++ ADL++QYL++RP WL W+ G+ ++GL + Sbjct: 120 GENTTDEEDNNTVNDSKHAQLKRYQLATQLADLYEQYLIFRPQWLDNWQQGNFELDGLEK 179 Query: 161 ----AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGI 216 WQ LW+ L+ H + + + +P R+ G+ Sbjct: 180 ISASEHKWQGKLWRLLIAQLPYNPVELMH---------DAIANIQDKKELIPPRISFFGL 230 Query: 217 SALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL 276 + + P++L + AL +H+E+H NPC YWGD+ Y L++ Sbjct: 231 NTMAPMWLNFINALSEHVEVHFFHLNPCFSYWGDVVTEKYALNKLSQW------------ 278 Query: 277 FRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTP----- 331 + D VGNPLLA+ G+ GR++I +L D + +++ F Sbjct: 279 ----SDGVLPEELDVHSYVGNPLLANLGQQGREFISMLQDYSTI-DVELFEQAKSAQAIS 333 Query: 332 -----DNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREV 386 ++LH +Q+DILEL + + D SI CHS REV Sbjct: 334 NNNDVTSVLHQLQNDILELSDARSPDDEAITPKAVQH-------DDSIVITSCHSALREV 386 Query: 387 EVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS-----APADRYLPYAISD 441 + LHD LL +D +LTP+DI+VM I+ Y+P++ AVF A LP +I+D Sbjct: 387 QALHDYLLHQFNQDKSLTPKDILVMCPQIEQYAPYVNAVFTRGWQDIAGEVPPLPCSIAD 446 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 R A+ S P++ AF LL+LPDSRF +L+ L +P +A F I E L + W+ ++ Sbjct: 447 RSAKDSDPLVAAFTELLTLPDSRFGVSQLLSFLRLPAMANNFSINGEDLAKISAWLEQAT 506 Query: 502 IRWGIDDDNVREL-ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 + WG+D + + L A TW+ GL+R+L G+A ++ +Q L G + L Sbjct: 507 VHWGLDLTHKQSLLGQQANASFTWQQGLSRLLRGFAYADSEQIYQQQLLLSNVEGSDSIL 566 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF----LPDAETEAAMTLIEQQW 616 +G L + QL+ + L + R +W + L+ F + E ++ +IEQ Sbjct: 567 LGQLMLFIEQLHYFSENLQRSRTAIQWQTFLLEQLSHLFSRVDADNVSNENSLMVIEQAI 626 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 ++ A + D + L ++ D L+Q Q S++F+ G V C+++PMRSIPFKV+ Sbjct: 627 AGLVEHCHHAHFEDDISLLIVVDYLSQHFSQGDASKQFMVGQVTFCSMLPMRSIPFKVIA 686 Query: 677 LLGMNDGVYPRQLAPLGFDLMS-QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 +LG+NDG +PRQ LGFDLMS K K GDRSRR DDRYLFLEA+IS++ LY+SY GR+ Sbjct: 687 VLGLNDGEFPRQRQALGFDLMSLSKAKLGDRSRRGDDRYLFLEAIISSRNSLYLSYQGRN 746 Query: 736 IQDNSERFPSVLVQELIDYIGQSHYLPGDEA-----LNCDESEARVKAHLTCLHTRMPFD 790 I++N+E+ PS++V+EL++Y+ Q + E N D++ A F Sbjct: 747 IKNNNEKQPSLVVKELMEYLAQGYGWQFSEEQLTSDNNNDDTNAESNQSGIYQLAMQAFS 806 Query: 791 PQNYQPGERQSYAREWLPAASQA--------GKAHSEFVQPLPFTLPETVPLE----TLQ 838 P NY+ G S+ WL + G+ + ++ L T +TV + L Sbjct: 807 PNNYR-GTWPSFDANWLALGQSSNSDNDESMGEGSTLAIESLAVTPEQTVEVSLSCQQLI 865 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ------- 891 RF+ HP + F Q +L + F D + D EPF + L Y + Q LL+A + Sbjct: 866 RFYQHPAKMFAQQQLNLYFENHDVLLEDVEPFSVNHLQSYLLRQDLLSAALTGTIESPSN 925 Query: 892 -DDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSM---EIDLAC 947 D +E++ R +G P ++ ++QQ ++ + + + L Sbjct: 926 KDGSEQVITRAHLSGKFPDLPTTTNLFKDYQLDVQQFSEEISKVNCENPELIDCNLVLDI 985 Query: 948 NGVQITGWLPQ-----------VQPDGLLRWRPSLLSVAQGMQLWLEHL---VYCASGGN 993 +G ++ G Q V+ + L+ +R S ++ + L V+ Sbjct: 986 DGTEVDGPSAQKIRVSLNTKLAVKNNLLVHYRSSSAKAKDKFVMYFQQLVVQVWQDQAIA 1045 Query: 994 GESRL-----------------FLRKDGEWR-FPPLAAEQALHYLSQLIEGYREGMSAPL 1035 E+ + F K + F A L L++ + +G L Sbjct: 1046 NETNITDDNQRLQQVTETIGLYFNTKAQKVEQFNVANIADAKSKLINLVKMFFKGQQQVL 1105 Query: 1036 LVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR 1095 L+ G + + +++ +F + G+M RG DD + W Sbjct: 1106 LL----NGELADQVFTKKRGQLVEMTQA------RFEGLWIGDMSTRGLSDDDYLSYFWP 1155 Query: 1096 Q 1096 + Sbjct: 1156 E 1156 >UniRef50_P57528 Exodeoxyribonuclease V gamma chain n=4 Tax=Buchnera aphidicola RepID=EX5C_BUCAI Length = 1070 Score = 788 bits (2034), Expect = 0.0, Method: Composition-based stats. Identities = 307/1118 (27%), Positives = 571/1118 (51%), Gaps = 51/1118 (4%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +Y SN L+ L I+E + + FE E+ + + + Q+L + +++K GI+AN Sbjct: 1 MFTIYKSNSLNTLLLKAYHIIEEKPFSNIFEKEIFIYDNKVLFQYLNIFIAEKKGISANF 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 F P FIW +F +L + ++ F + W+++ +L E+ + D Sbjct: 61 KFYHPNDFIWKLFKIILSKKELKNIFTHSMIIWEIIKILDNKKFFENCS-------KKKD 113 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 K F+ S A +F +Y++YRP+W+ QWE + + + WQ LW ++ T ++ Sbjct: 114 MIKKFKFSFLMASIFKKYILYRPEWINQWEIEKNISIFDKNEQWQIKLWMEIIHNTKKIN 173 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 Q H ANL+ + ++ LP R FI ++ P Y++ Q + + +I+ L+ Sbjct: 174 QSSDHFANLFYNIQKIIKEKKIKKKYLPKRFFIISSFSMNPSYIKIFQNISIYTDIYFLY 233 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 P + + +D ++ E L + L+ Sbjct: 234 ITP-----------------FKKNIFNFIQDNKIFTDIKIEKKNILND---------SLI 267 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 WG+ Y + + + ++ ++ F +LL I+++ + Sbjct: 268 TLWGQYEEIYYFYILKSKKNKVINCFKKNKNKSLLSQIKNNFFN------------DSEF 315 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + KR L+ D SI+ ++C + + E+EVL+++LL L E+ ++ P DI+V +D+Y Sbjct: 316 TRKKRFLEISDHSISINICFNKKNEIEVLYEKLLIFLNENSSIKPGDIVVTSFSLDTYIS 375 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 I +F S + +P+ I+ + ++ + +L +F +L+L +SRF +E++L LLDVP +A Sbjct: 376 SINLIFQSIDNKKTIPFFIAKKSSKTTEIMLWSFKKILNLSNSRFENEEILELLDVPEIA 435 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 +F+ +EE ++ L W+ E+ IRWGI++ + L P Q+TW +G+ ++LL YAM Sbjct: 436 EKFNFSEEEIKILYHWIEETNIRWGINEKHKNYLLFPKNKQNTWFYGIEKLLLSYAMNDT 495 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + W VL +G +EL+G L S + L W++ L++ + L W + D+++ FF Sbjct: 496 EKIWNGVLSCSFINGSRSELIGKLISFIKILEKWQKKLSKLQYLTYWRSLYSDLVSDFFQ 555 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 + + E ++ +I+++W II + L + Y + +++L+ + + FL G VN Sbjct: 556 NNTKIEKSIQIIQKKWIEIIDDSLSSNYLKKISINILKKIFFYKYYD-NNHEIFLPGVVN 614 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 C + IPFKV+C++G + P+ F+L+ + P GD + YLF+++L Sbjct: 615 FCYPDSVCYIPFKVICMIGTDHTSIPKTNYLDNFNLLKKYPLIGDINLYQKYSYLFVQSL 674 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 A++ YISYIG S++D S+ PS+LV +L++YI + GD+ L+ E+ ++ +L Sbjct: 675 SCAEKYFYISYIGYSVKDESKVHPSILVDQLLNYITLNFCFIGDQNLSYKENSKKITKYL 734 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 H + F Y+ +S+ ++ + + + + L + L+ L F Sbjct: 735 CKKHKKQFF----YETKNIESFIQDDIKNDFKHTEKNISHKNLLKKNTDNEINLKDLINF 790 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR 900 W HP+R F+ L++ R + +I TE F++ L+ ++I +LL+ ++ + +L++ Sbjct: 791 WKHPIRYFYNSHLKIKIRQKKQKINTTETFLVNPLNSFKIKNKLLDYIIHNKNITKLYQH 850 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ 960 + +G LPY FGEIFW +EM+ +A++V+ R + +I+L QI G L ++Q Sbjct: 851 YLLSGKLPYHFFGEIFWIKNIKEMKLIANKVMQYRIEKEEKKINLNIEKYQIYGVLSEIQ 910 Query: 961 PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL 1020 GLLRW+ S + + + LWLEHL+Y GG G+S++ K W F L + +A YL Sbjct: 911 STGLLRWKTSSIRYSDRIALWLEHLIYSILGGCGKSKIIGYKSQIWSFSSLNSHRAHSYL 970 Query: 1021 SQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMM 1080 + I+GY +GM PL L +SG +WL YD +N+ + +D T KA K L ++G+ Sbjct: 971 LEYIKGYIKGMKEPL-FLTKSGASWLDQVYDERNNCIKNDYYTKIKAYKKLLYTWKGDNY 1029 Query: 1081 VRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 GE +D + ++ + ++ I E ++++L+P+ + Sbjct: 1030 TEGEQEDYYLKKTITISNKKNIKKICESAEKWLIPILK 1067 >UniRef50_A1SDB1 DNA helicase/exodeoxyribonuclease V, gamma subunit n=2 Tax=Actinomycetales RepID=A1SDB1_NOCSJ Length = 1113 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 303/1164 (26%), Positives = 503/1164 (43%), Gaps = 110/1164 (9%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG------ 55 L+++ ++R DVL + ++ L DPF E+++V + G+ +WL LS + G Sbjct: 3 LQIHRASRTDVLADALGDLLRT-PLADPFAEEVVVVPAKGVERWLTQRLSHRLGAGPRGD 61 Query: 56 --IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRH 113 + A + F P S + + R ++ ++ + + W L+ + + L +F L Sbjct: 62 DGVCAGVRFLNPRSLVSLLLGR-----ERDDPWDPERLVWPLLATIDESLGEREFATLGR 116 Query: 114 YLTDDSDKR-------KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVE-----GLGEA 161 +L D + + ++ + A LF Y + RP + W G E GL Sbjct: 117 HLGHGVDGADGELRRNRRYSVALRLAHLFASYALQRPSLVTAWREGRDGEHGGEQGLPPD 176 Query: 162 QAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPP 221 AWQ LW+ L+ H + L++ P LP R+ + G + +P Sbjct: 177 LAWQPELWRRLIAQVDAPPPDVRH-----AQTCAALQAGGDGLP-LPDRLSLFGHTRIPV 230 Query: 222 VYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSE 281 + L+ALG+H ++HL P W D+ D Sbjct: 231 TEVALLKALGEHRDVHLFLPQPSPVLWDDLAD-----------------------LGGPG 267 Query: 282 NAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV-----TPDNLLH 336 D + VG+PLLAS G+ R+ LL + S + P LL Sbjct: 268 GVVPRAADDSVERVGHPLLASLGRDARELRRLLDGVSSEEVRPPAGTPTGSTTDPVTLLG 327 Query: 337 NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 +Q D+ + + R LDP D S+ H CH P R+V+VL + L+ + Sbjct: 328 WLQHDLRANHAPS---------YDERSTRELDPDDHSLQVHACHGPARQVDVLREVLVGL 378 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD----RYLPYAISDRRARQSHPVLE 452 LE+DPTL PRD++VM DI++Y+P I A FG A D L ++DR ++P+L Sbjct: 379 LEDDPTLEPRDVLVMCPDIETYAPLISAGFGLATTDGHPAHRLRVKLADRALTSTNPLLA 438 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 LL L R + DVL L + RF T++ L + +WV +G+RWG+D+++ Sbjct: 439 VAGDLLDLAGGRVTASDVLDLAGTDPVRRRFGFTDDELDRVSRWVARAGVRWGLDEESRA 498 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV-LPYDESSGLIAELVGHLASLLMQL 571 + +TWR GL R+LLG AM LP D+ + +L G LA L+ ++ Sbjct: 499 AFRMERFPHNTWRTGLDRILLGVAMSGDDHHHLGRGLPLDDVASSEIDLAGRLAELVARV 558 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 + LA R + +W RD + + A+ + E++ A + G Sbjct: 559 DRTLTVLAGARTVADWATGLRDGVRSLVDVAADDAWQVPQFERELGR--AAASSHEGGLE 616 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 + L+ +R L RL F G + + T++PMRS+P +VVCL+G++DGV+PR A Sbjct: 617 LRLADVRAMLESRLAGRPTRANFRTGSLTVATMVPMRSVPHRVVCLVGLDDGVFPRAGAV 676 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 G D++ + P G+R R +DR L L+A+++A + L I+Y G Q + P+V + E+ Sbjct: 677 DGDDVLGRHPLTGERDVRSEDRQLLLDAVLAATEHLVITYSGADEQSGASLPPAVPLGEI 736 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 +D + + A V+ + H P+D +N+ S+ L A Sbjct: 737 LDAADR-------------TTNAPVRDRVLTRHPLQPYDARNFTRERPFSFDTAALAGAR 783 Query: 812 QAGKAHSEFVQPLPFT---------LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 A E L V L+ L+ F HPVRAF + RL V E Sbjct: 784 SARGVRREPPPLLDGPLPPRLALDGRAADVSLQDLRDFLGHPVRAFLRGRLDVATPFEPD 843 Query: 863 EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQ 922 ++ D P L+ L ++QI +LL L+ D + + AG LP G + + Sbjct: 844 DLADAIPVSLDSLEKWQIGDRLLRQLLAGQDPVAVLTAEQLAGTLPPRGLGTLALHEVAE 903 Query: 923 EMQQLADRVIACR-QPGQSMEIDLAC-NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL 980 E Q+L R R +S+++D+ +G ++TG +P V ++ S L+ Q + Sbjct: 904 ECQRLWSRTADLRDGERRSVDVDVDLRDGRRLTGTVPGVYGSRVVSLGYSRLNARQRLHA 963 Query: 981 WLEHLVYCASGG-NGESRLFLRKDGEWRFPPLAAE---QALHYLSQLIEGYREGMSAPLL 1036 W++ L A+ + + KD L +A+ +L L++ G+ APL Sbjct: 964 WVDLLALSATYPDQHWTAHAVGKDRAGPKRALCGPLDHRAVGWLRDLVDLRDRGLCAPLP 1023 Query: 1037 VLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ 1096 V ++G AW + M D ++ AR ++ + GE D ++QR++ Sbjct: 1024 VPVKTGAAWADAHAR---ELMGQDHPPVEAARREWETDPHNQFGITGEDADPYHQRVYGP 1080 Query: 1097 LTP---ETMEAIVEQSQRFLLPLF 1117 P + E + PL Sbjct: 1081 AAPVEALLDAGLGEHAWAIWEPLL 1104 >UniRef50_C1SHH5 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHH5_9BACT Length = 1038 Score = 778 bits (2010), Expect = 0.0, Method: Composition-based stats. Identities = 265/1125 (23%), Positives = 481/1125 (42%), Gaps = 102/1125 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML++Y NRL+ L M+ + P I +Q+ GM +W+ + L++ GI+AN+ Sbjct: 1 MLKIYTGNRLERLLEKMDMNICSAG-SGPLTKVPICIQTPGMQRWIGIKLAELTGISANL 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAF-NKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 DF P + + + E ++ + K + WK+ + L L + + +R+YL D Sbjct: 60 DFIFPGALMKRLAGVGAGE---KAPWPEKNELVWKVYSKLNSLPSEQFYEHIRNYLEGDI 116 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEA-QAWQAPLWKALVEYTHQ 178 + + ++L+ + AD+FDQY VYRP + W + E WQ L++++ Sbjct: 117 NGIRAYRLAGRIADVFDQYQVYRPQMVLDWLSVKPKNPPVEDNDIWQMELFRSIF----- 171 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 + ++ +FI+ P L + + I GIS LP +++ L+A ++ +I+ Sbjct: 172 -PHGSGCKTTIFDKFIKNCTKGANNCPALKTPIHIFGISVLPAFFIEMLKAASQYTDIYF 230 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 +P R YWGD K +L ++ + + + Sbjct: 231 YLLSPTRQYWGDSKTIREKRRLEKITQKS--------------------AEELYIEEKHE 270 Query: 299 LLASWGKLGRDYIY-LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 LL + G +GRD+ L +S + + D+ +++L +Q++IL+LE Sbjct: 271 LLDNLGVIGRDFFDYLFGSDDSFLTEEEYFDIAKNSVLQTVQAEILDLEYGNEK------ 324 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 D+SI + CH+P RE+E L+D+LL + D TL P DI+VM DI+ Sbjct: 325 ----------PSHDNSIIINNCHNPLREMETLYDQLLELFNNDQTLRPSDILVMTTDIEK 374 Query: 418 YSPFIQAVFGS-APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y+P+I+AVF + +PY+I+D +Q++ F+ LLS F DV+ +L Sbjct: 375 YAPYIKAVFDNPYSERERIPYSIADVSEKQTNRPAGIFLELLSTLRGDFSLADVMRILSY 434 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 ++A +F I L L + +G W +++R+ L TW L R+ LG A Sbjct: 435 DLIADKFSIKRSDLSTLSTMLQNAGAMWSYGREHLRKEGLTIDDTFTWERALRRVALGLA 494 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 S+ + ++ +G L + + + E+ + EW + + + + Sbjct: 495 EGSSGSIYSE-AAVKNVPFSLSVQIGGLMRFADLSSKYAEQMDSEKTIPEWCALMQALAD 553 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 + + + + + I E + +AVP + + + L + L + R ++ F++ Sbjct: 554 DYIKETFDNADDILHLSKCIADINTEAENGDFTEAVPAAPVLERLTESLSETRGAKGFIS 613 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 G V C ++PMRSIPF+V+C+ G+++ +PRQ L FDLM++ PK GDR+ RD DRYLF Sbjct: 614 GRVTFCAMLPMRSIPFRVICVAGLDENTFPRQKVSLEFDLMAKSPKPGDRNNRDSDRYLF 673 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 LE LISAQ L +SY G+S +DN+E PS L+ EL ++ + Sbjct: 674 LETLISAQDTLILSYTGQSERDNAELLPSTLITELNTHLKGRFGIED------------- 720 Query: 777 KAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ---AGKAHSEFVQPLPFTLPETVP 833 +T F + + +Y+ + + H P+ +P+ V Sbjct: 721 ---ITLKQKLHSFSRDYFSNEKLFTYSSDKYNTSRAFSSEKTGHRFSTLPIEVQMPDEVS 777 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD 893 L + F+ P F + L++ + D +P+ E + L +Y+I L +E D Sbjct: 778 LADFENFFISPPDYFLRKVLEIRPKLRDESLPENEIMCPDPLLQYKIIDNALRERLEGKD 837 Query: 894 AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP-GQSMEIDLACNGVQI 952 + LP G + +L V + +ID A +G+ I Sbjct: 838 PDNALEYLYKTAQLPPENLGRLSITETLNTSMELNRTVTETLGGTPEEQKIDSAIDGLHI 897 Query: 953 TGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLA 1012 +G + V + + +P+ + ++ W+ HL+ C + PP Sbjct: 898 SGTIFGVSGNRYVYAKPASIKPKDIIRGWIRHLLLC--QKASITTTLCGGGNTVEIPPAD 955 Query: 1013 AEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFL 1072 + +L+ L+E ++EG +PL G L + +S Sbjct: 956 S----GHLNNLVEIFKEGHKSPLRFHITDGIRELNDRVLKSSFLEDSHNSVAS------- 1004 Query: 1073 QAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLF 1117 D ++ + T +A +++ + PL Sbjct: 1005 --------------DYAFRICFGADTTLDRDA----AEKIINPLL 1031 >UniRef50_B1XZ24 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XZ24_LEPCP Length = 1294 Score = 777 bits (2007), Expect = 0.0, Method: Composition-based stats. Identities = 369/1277 (28%), Positives = 540/1277 (42%), Gaps = 185/1277 (14%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L + H NRL++L + + L P E E++LVQS G+A+WL+M+L+Q+ G+ A Sbjct: 13 LLILHGNRLELLLETVLQWLAAHPLA-PLEEEVLLVQSNGIAEWLKMSLAQRVGVCAATR 71 Query: 62 FPLPASFIWDMFVRVLPEI--PKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD-- 117 LPA F+W + +L P S +K ++W+LM +LP L R F L +L Sbjct: 72 VELPARFLWRCYRAMLGRAGAPARSPLDKGPLAWRLMRVLPALAGRPGFEPLAQFLAGPG 131 Query: 118 ------DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV----------EGLGEA 161 D + QL+ + ADL+DQY VYR DWL W G V L Sbjct: 132 GPTPDAAPDLPRRLQLAQRLADLYDQYQVYRADWLIDWAAGRAVLTNPCTGAAPVALDAE 191 Query: 162 QAWQAPLWKALVEYTHQLGQPRW---------------HRANLYQRFIETLESATTCPPG 206 Q WQA LW+AL+ + R ++ RF+ L Sbjct: 192 QRWQALLWQALIRDLGTTDADQPADAPAESAALAVLAGTRPAVHARFVAALAQDEAPQRP 251 Query: 207 LPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRR 266 LP RV + G S LP L+AL AL H ++ L NPCR++W D+ D L + R++ Sbjct: 252 LPRRVVLFGHSHLPAQTLEALAALAGHTQVILAVPNPCRFHWADMIDGRELLRSAHRRQP 311 Query: 267 HSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ----- 321 + +PLLA+WG+ GRD++ LL E Sbjct: 312 LRNGRD-----------LGALDIADAHAEAHPLLAAWGRQGRDFLRLLDAFEEQLGGAEA 360 Query: 322 --------ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS 373 +D F D D LL +Q+ I + A + R D S Sbjct: 361 GALRGELPRVDLFDDEPGDTLLAQVQARIRDAVPLAEHAALNGPPLDAAAARQRAATDRS 420 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPT-LTPRDIIVMVADIDSYSPFIQAVFGSAP-- 430 I FH+CHS REVEVLHD+LLA L L PRDI+VMV D++ Y+P ++AVFG P Sbjct: 421 IEFHLCHSAMREVEVLHDQLLARLAAAKGSLAPRDIVVMVPDVEVYAPLVRAVFGQYPAS 480 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 R++PY I+D R R HP+L A LL + + R + ++ L+DV LA RF + + L Sbjct: 481 DARHIPYDIADLRPRGHHPLLLALEWLLRITEQRCTASELRELIDVAALANRFGLEGDDL 540 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPAT-GQHTWRFGLTRMLLGYAMESAQ-----GEW 544 L +W++ +G+RWG+D ++ L+L A +TW FGL RMLLGYA+ W Sbjct: 541 PTLGRWLDGAGVRWGLDAEHRASLDLAACGEANTWAFGLRRMLLGYAVGDDPAATPGEPW 600 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 + PY E GL A + G LA L+ L W R +W R +L AFF P E Sbjct: 601 HGIAPYAEVGGLEASIAGALAELVEALQRWWREARTAATPADWDARARALLAAFFRPATE 660 Query: 605 TEA-AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 E + + A Y +AVPL++LR+ +D+ + RFLAG V CT Sbjct: 661 DERLLLAALHDALAQWREACDEAGYAEAVPLAVLREAWLGTVDEPGLRSRFLAGGVTFCT 720 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ--KPKRGDRSRRDDDRYLFLEALI 721 LMPMR+IPF+ VCLLGMN+G YPR+ FDL++ + + GDR+RRDDDR L LEAL+ Sbjct: 721 LMPMRAIPFQGVCLLGMNEGDYPRRGVRSDFDLLAAPGQRRPGDRARRDDDRMLMLEALL 780 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 SA+ +L++S+IGRS++DN+ + PSVLV +L DY+ P + L+ Sbjct: 781 SARAQLHVSWIGRSVRDNTAQPPSVLVAQLRDYLAAGWGRP-------------LVDALS 827 Query: 782 CLHTRMPFDPQNYQPGERQ---------------------------SYAREWLPAASQAG 814 H PF + ++ Q +YAREW A ++ Sbjct: 828 VEHPLQPFSRRYFEQTVEQGEPVDGPADETGDETGNDTAALRRGLLTYAREWRAAHARED 887 Query: 815 -----------KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE 863 +P P P + L L RF +PV RL V D Sbjct: 888 AAAAASDPLTAAPTPIDRRPAPADQP-PLKLAMLTRFLRNPVADHLNERLGVRLALADEA 946 Query: 864 IPDTEPFILEGLSRYQINQQLLN-----------------------ALVEQDDAERLFRR 900 + D EP L L + ++L+ A Q + Sbjct: 947 LADDEPLGLHALDESILLRRLVEQGDVQTAQLPASAPAADPESDADAARLQRALQDGSLS 1006 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVI------ACRQPGQSMEIDLAC---NGVQ 951 + G LP GE + + ++ + + R Q + + L +Q Sbjct: 1007 LQRQGILPLAGLGERWQQAFVRQSLPMLAQWRIWQEAAPERAAPQPLNLALPLADGGALQ 1066 Query: 952 ITGWLPQVQ---PDGLLRW--------------------RPSLLSVAQGMQLWLEHLVYC 988 I WL +Q G L W + + + + WL ++ Sbjct: 1067 IDDWLDGLQIEATTGALLWLDLQASRLCAKPGKKDQGKGKAGPVRPDKLYRAWLV-MLAA 1125 Query: 989 ASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKT 1048 + G + + +D P AE A L+ L + APL + P S A L Sbjct: 1126 GAAGIALTGRIVGRDVTLELSPPPAEVARAALADLTGAWWASWRAPLAIAPRSALAALAE 1185 Query: 1049 CYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVR---GEGDDIWYQRLWRQLTPE--TME 1103 + A + Y+G R E D+ R++ + Sbjct: 1186 APVLADADPSGPRPWPLDAWIAAERTYDGGTFTRRVPPESDEPSLARVFADWEALGARAD 1245 Query: 1104 AIVEQSQRFLLPLFRFN 1120 ++R PL + Sbjct: 1246 EFQHWAERLYRPLRAWA 1262 >UniRef50_Q1NSB7 Exodeoxyribonuclease V, RecC subunit n=3 Tax=Proteobacteria RepID=Q1NSB7_9DELT Length = 1155 Score = 768 bits (1982), Expect = 0.0, Method: Composition-based stats. Identities = 347/1183 (29%), Positives = 539/1183 (45%), Gaps = 104/1183 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVE-----------RERLDDPFEPEMILVQSTGMAQWLQMTL 50 L +Y SNR++ L A +E + P E I+VQS GMA WL+ L Sbjct: 6 LLLYRSNRIEELLACLEAELAVASSAGSSAGSSAGSSAPLTAECIVVQSQGMAVWLEQRL 65 Query: 51 SQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTL 110 +++FGI AN DFP P F + VL +++S + L+ LLP+L +R +F Sbjct: 66 AERFGIWANPDFPHPRRFHQRLLQAVLGRQAVADFSHRESFTLALLALLPKLPQRPEFAP 125 Query: 111 LRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQ----AWQA 166 L YL D +D K QL+ K A LFDQY VYRP+ + WE G G A+ WQ Sbjct: 126 LARYL-DGADDWKCLQLAEKIAYLFDQYAVYRPEMVLAWERGEEQAGTAGAELADNRWQP 184 Query: 167 PLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQA 226 LW+ L P L + F + P LP R F+ I+ LPP+YL Sbjct: 185 LLWRRLSRQLGSPVAP------LTEAFASLRQGRLAAPELLPPRAFLFAITTLPPLYLNL 238 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 L + I IHLL +P R YW DI PA L ++ R + + P Sbjct: 239 LDQAARIIPIHLLLFSPAREYWADIFTPAALREMELRHSDAALLEEGEPAALHLSG---- 294 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSD---LESSQELDAFVDVTPD-NLLHNIQSDI 342 G+PLLAS G + R++ +L + + + + + F + + LL +Q DI Sbjct: 295 ---------GHPLLASLGTVAREFQDILEEQSDYQPATDGERFPENQENPGLLARLQQDI 345 Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 +L+ A + D S+ H+CHSP REVEVL D+ L L + Sbjct: 346 AQLKEPAAGEGEESQP---------PTADDSLAIHICHSPLREVEVLQDQ-LLQLLDGEE 395 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRY-LPYAISDRRARQSHPVLEAFISLLSLP 461 +P DI+VMV DI++Y+P I+AVF P DR +PY I+DRR + +L+ + + Sbjct: 396 FSPHDIVVMVPDIETYAPLIEAVFNRPPGDRRRIPYRIADRRLSREGELLDTLLRFFEVA 455 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 R VL LL + + L+ + QW+ +S + WG+D+++ + PA Sbjct: 456 RGRLEVSAVLDLLAAEPVRRGLGLDGGQLQRIEQWLRQSRVCWGMDEEHRQHHGQPAQRL 515 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 +TWRFGL R+LLGYAM +A + +LP+ + G + G L +L + + Sbjct: 516 NTWRFGLDRLLLGYAMPAASDVFADILPHADIEGQESVTAGILLRFCEELFALVKLVQTP 575 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + + +W + + +L + DA ++ + +++E A + L L Sbjct: 576 QTIADWATISQRVLISLGGDDAASDWQELCLRDTLAQLLSEADQAALTRPLELPAFLRLL 635 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 RLD ++ FL G + C ++P+R+IPF VVCLLG+N+ +PRQ FDL++ P Sbjct: 636 RGRLDGAGGTRGFLDGGLTFCNMLPLRTIPFPVVCLLGLNNDDFPRQEPAADFDLLAAAP 695 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 + GDR RR DDR++FLE+L++A+++LYISY+GRS++DN PSVLV EL+ + Sbjct: 696 RPGDRCRRRDDRFMFLESLLAARRRLYISYVGRSLRDNRSLPPSVLVDELLTCLAAMS-- 753 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ--PGERQSYAREWLPAASQAGKAHSE 819 P N + RV A T H PF P+ +Q G SYARE+LP + A + Sbjct: 754 PKAAGANDEAHRQRVAARFTVEHPLQPFSPRYFQNTAGPLFSYAREYLPPPASPDAAPAT 813 Query: 820 FVQPLPFTLPE-----------------TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 P + L L F+ HP + + RL + + Sbjct: 814 VSGPRAQLPAAADHDSVPPAAWMSTTSTAISLADLHDFFRHPAGWYGRRRLGLLPPQQQP 873 Query: 863 EIPDTEPFILEGLSRYQINQQ--------LLNALVEQDDAERLFRRFRAAGDLPYGAFGE 914 D +P L+ L RY+I + L + + + L+++ RA G+LP G + Sbjct: 874 AGVDRQPLELDNLDRYRIGSRLLQQPALLLPDGAAGEPPWQALYQQLRAGGELPPGRAAQ 933 Query: 915 IFWETQCQEMQQLADRVI--ACRQPGQSMEIDLAC-NGVQITGWLPQVQPDGLLRWRPSL 971 ++Q LA + + + +DLA + ++++G L Q LLRW PS Sbjct: 934 PALRELVADLQPLATFLAGNPGGKTLPPLVLDLALADNLRLSGELSQRATAALLRWSPSR 993 Query: 972 LSVAQGMQLWLEHLVYCASGGNGE--SRLFLRKDGE-----WRFPPLAAEQALHYLSQLI 1024 S + WL+HL CA + + + +D + F PL++E A L++L+ Sbjct: 994 ASAKLWLAGWLDHLALCAQAPEDQDWQTIMVGRDQQNGADIRIFRPLSSELARELLTKLL 1053 Query: 1025 EGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRG- 1083 + G PL P S ++ AQ ++ K QA+ G+ RG Sbjct: 1054 ALFVAGQQGPLPFFPRSAYEFVAKTMTAQEESQEA------KGWQAARQAFYGDGYQRGA 1107 Query: 1084 --EGDDIWYQRLW------RQLTPETMEAIVEQSQRFLLPLFR 1118 E D + + L+ E ++ PL + Sbjct: 1108 PPESADFYVETLFFGPSGRSPAATELPPGFAATARLVYEPLLQ 1150 >UniRef50_C3X2X1 Exodeoxyribonuclease V n=2 Tax=Oxalobacter formigenes RepID=C3X2X1_OXAFO Length = 1129 Score = 767 bits (1981), Expect = 0.0, Method: Composition-based stats. Identities = 310/1179 (26%), Positives = 514/1179 (43%), Gaps = 127/1179 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML + SNR DVL + + F E ++V S + + L + ++ G+ A + Sbjct: 12 MLNLNLSNRFDVLLQTFCENLAKRP-ATVFTAEQVIVPSAAIKRKLMLAIADTAGVCAGV 70 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +F A ++W + + E+P+ S F+ +SW+++ LL + + + YL+ D Sbjct: 71 EFSFLAQWLWRQIGKFV-EVPETSPFSSSVLSWRILRLLEEPGFAAPYPRIAGYLS-RCD 128 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGL----------GEAQAWQAPLWK 170 + F L+ + A LF+QY++ RP+WLA W G VE + GE QAWQA LW+ Sbjct: 129 EIMRFDLACRIASLFEQYVLSRPEWLAAWSKGETVEIVRKGHPKQAVAGEDQAWQAALWR 188 Query: 171 ALVEYTHQLGQPRWHRANLYQRFIETLESATTC-PPGLPSRVFICGISALPPVYLQALQA 229 + E T L + +RF++ LE+ LP RV + ++ P ++ L Sbjct: 189 KIAEETGTLEEEPA------ERFLKMLETGGEEMAARLPERVHLFLEPSVAPYHVGILNR 242 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 LG+ ++I L NPCR YW +I D LA L RQ+ Sbjct: 243 LGRWMDIELYVVNPCREYWFEIVDSRRLAWLSKRQK------------------------ 278 Query: 290 DGEQDVGNPLLASWGKLGRDYIY-LLSDLES-SQELDAFVD----VTPDNLLHNIQSDIL 343 D + GN LLASWGK R + LL+ LE +E D F+ P+ LL +Q IL Sbjct: 279 DLYHETGNRLLASWGKESRASLESLLARLEPVGRENDGFISCAERARPETLLSRLQDAIL 338 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 +L ++ D S+ H+ HS RE+E+LHD+LL Sbjct: 339 DLTELEAGSLSHLG------------RDGSLEIHLAHSRTREIEILHDQLLRRFASGDPP 386 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 P DI+V+ D+D +P I+AVF + +PY I+ R+ + +PV A + LL+L S Sbjct: 387 GPGDILVVSPDLDEIAPMIEAVFSHNRSAPQIPYVITGRKDSRINPVSRALLDLLALASS 446 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 RF + V+ +L +P + A F L +R W+ ++GI W ID + RE LP H+ Sbjct: 447 RFTAAGVIDVLMLPEIGATFGFGG-DLDKIRGWLGDAGICWAIDGAHKREFGLPEEDGHS 505 Query: 524 WRFGLTRMLLGYAMESAQG-EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 + GL R+ L YA+ + + LP ++G A +G L + + +R L+ + Sbjct: 506 FHDGLHRLFLAYALPDGRRVPFADRLPAGHAAGTQAAGLGQLWRFVEAVRQLKRDLSHPK 565 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 W +L+AF ET A + + + A + R L Sbjct: 566 TAAGWWQTWHGILDAFVTVTPETLEADREVRMRIAGLRDAMTQAGEAFETGFIIARHALE 625 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 + L+ AG V + +R++PF V ++G++DGVYP ++ FDL+ P+ Sbjct: 626 RALEGAGQGSVP-AGVVTFAPMDSLRNLPFGHVYVIGLDDGVYPAEVRQQEFDLIRLAPR 684 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 +GD + D+ +FL+ ++SA + LY+S GR+I+DNS + PS+L+ EL++ + + Sbjct: 685 KGDCLPHETDKNVFLDLVLSAGKSLYLSCTGRNIRDNSPKPPSILIAELLEVLEPALAEK 744 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ---PGERQSYAREWLPAAS-------- 811 D E+ + L H PF P + S+ + A + Sbjct: 745 TD-----GEARLAAREKLLVEHPLQPFSPDYFNGRADERMVSFRSDLCDALNLKKEKINI 799 Query: 812 ---------------------QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQ 850 AG P V L+ L RF+ HP R + Sbjct: 800 KEELEYDTSEDGLDNDIGDELAAGTPFFRAPLAFPDASWRDVLLDDLIRFFCHPNRYLMR 859 Query: 851 MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYG 910 RL ++F ++ E+ EPF ++ +R ++ +LL ++ E + R A + P G Sbjct: 860 SRLGLDFPRKEKELASDEPFTVDRTARRRLADRLLPLYLDGMAPEDIARSAAAGNEFPAG 919 Query: 911 AFGEIFWETQCQEMQQLADRVIACRQP------GQSMEIDLACNGVQITGWLPQVQPDGL 964 A G +++ E+ A + A + +++E DL +++G L V+ GL Sbjct: 920 AMGAQQRQSELMELSAFAQALSADLKTGFVAPVSRTLEFDLGGEIWRLSGSLSDVRKTGL 979 Query: 965 LRWRPSLLSVAQGMQLWLEHLVY--CASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQ 1022 +R+R + + W+EHL CA G S ++ +DG+ P +A L Sbjct: 980 IRYRYDEGAPRDYLAAWIEHLFLNACAPEGVALSSVWHFRDGKTVLEP--YGRARAVLRD 1037 Query: 1023 LIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVR 1082 L++ YR G++ PL P S ++++ A KA + A + R Sbjct: 1038 LMDIYRTGLNRPLHFFPRSAWEFVQSGGHA------------GKANGIWRPA---DGSRR 1082 Query: 1083 GEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 GE D + R + + R PL + Sbjct: 1083 GESADAFNWLAMRGVREPLDADFAALANRVFGPLLAHMK 1121 >UniRef50_A4B914 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Reinekea blandensis MED297 RepID=A4B914_9GAMM Length = 1080 Score = 763 bits (1970), Expect = 0.0, Method: Composition-based stats. Identities = 325/1124 (28%), Positives = 526/1124 (46%), Gaps = 97/1124 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK--FGIAA 58 ML Y SNRL+ L +++ ++ +P + +LVQ GM WL M L+++ + Sbjct: 1 MLYTYPSNRLENLVLVLDTLMNNIG-SEPLTADAVLVQHPGMQHWLSMELAKQSSNQLCM 59 Query: 59 NIDFPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQ--LLEREDFTLLRHY 114 NI +PLP + WD+ +L +P+ S + ++ ++W+L LL Q + Y Sbjct: 60 NITYPLPVRYFWDLIRLILGPDRVPERSVYTREILAWRLYHLLQQDAITANPLMLEPNRY 119 Query: 115 LTDDS---DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKA 171 + + FQL+ + ADL++QYL+YRPDW+ W+ A+ WQA LWKA Sbjct: 120 WQEQPAYLQDSRRFQLAEQLADLYEQYLMYRPDWIEHWQE-------SPAEHWQALLWKA 172 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 LV+ H L + L LPS F+ GI++L P++L L L Sbjct: 173 LVDE------DPQHPLALMREASRRLSHPAQP---LPSHFFVFGINSLAPIWLDFLSHLA 223 Query: 232 KHIE--IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 + + IH+L+ NP +W D + K + R + + ++A + Sbjct: 224 RSTDTDIHILYLNPSAEHW----DQLHTEKQALKTRLRQQQSAQQRASWIDDDALFTDEA 279 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA 349 D NPLL S G+ G+ ++ LSD ++ + AF + L +Q D+L L + Sbjct: 280 D------NPLLTSLGQQGQVFVRQLSD-KADYDAQAFSAPEAETQLQTLQRDLLTLHDAR 332 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 ++ D ++ HS REV+ LHD LL DPTLTP+D++ Sbjct: 333 SQPHTLDH-------------DGTLMISSAHSAFREVQGLHDWLLHRFNADPTLTPKDVL 379 Query: 410 VMVADIDSYSPFIQAVFGSAPAD-----RYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 VM +++ Y+PF+QAVF + A+ LP +I+DR + + P + AF+ LLSLPD+R Sbjct: 380 VMCPNVEDYAPFVQAVFSRSFAELSEAVPPLPCSIADRNLKDADPTVAAFLELLSLPDTR 439 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA-TGQHT 523 F +++ L +P +A +F+++ + L+ + +W+ + I WG+D + + T T Sbjct: 440 FEVSRLISWLRIPAIADKFNLSADDLQRITRWLERANIHWGLDGQHKAQWTGQECTDHFT 499 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 W+ GL R+LLG+A L + G A ++G L S++ QL R L + R Sbjct: 500 WKQGLDRLLLGFAYGDHDAFVHDELLLHDVEGADALILGRLTSIIEQLQNIRSDLTRART 559 Query: 584 LEEWLPVCRDMLN-AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA-VPLSLLRDEL 641 W D L A + E + I + A +PLS++R L Sbjct: 560 PSAWQSYLIDQLQIAMLSTQSAYERSNQSILKAINDFTEFANKANLEQTDLPLSVVRYVL 619 Query: 642 AQRLDQ-ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 E+ +F+ G + +C+++PMRSIPF+VV +LG+NDG +PR PLGFDLM+Q+ Sbjct: 620 ENAFASPEQTGSQFMTGQITVCSMVPMRSIPFRVVAILGLNDGDFPRNRPPLGFDLMAQQ 679 Query: 701 -PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 P+ GDRSRR DDRYLFLEAL+SA+ LY+SY G I+ N R PS++++EL Y+ + + Sbjct: 680 PPRLGDRSRRGDDRYLFLEALLSARDHLYLSYQGFDIRKNEARPPSLVLEELFSYLERGY 739 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 +A PF P+NYQ GE S+ +W+ + Sbjct: 740 GFE--------------RARHIRQLPLQPFSPKNYQ-GEYPSFNDQWIHLQRPEPEQELL 784 Query: 820 FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE-IPDTEPFILEGLSRY 878 + P P + +F++HP RAF + RL + +E + D+EPF L L RY Sbjct: 785 NLLPATDLSPSE-SIHDWVKFFSHPARAFCEQRLGLYLNNTTTENLEDSEPFTLNHLDRY 843 Query: 879 QINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG 938 Q+ + ++AL+ Q+ + L ++ +AA P ET Q+ D V A Sbjct: 844 QLQTETVSALLNQESPDVLIQQAKAASAFPLSDLALTTAETWQQQAASFTDLVRAEGADR 903 Query: 939 -QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESR 997 + + L ++G LP + LL WR + +QLWL HL+ + Sbjct: 904 IEYRPVTLQTADWSLSGVLPIIDNQQLLSWRLANAKGRDILQLWLMHLLANSQKPTHSRG 963 Query: 998 LFLRKDGEWR-FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDA 1056 L+ +D + F E A L+ L +++G+ P ++ + WL + Sbjct: 964 LYRGRDEKVEQFDLAPIEDATSLLNDLYRQWQQGLQEPSVLHSD----WLPLYLSDPTN- 1018 Query: 1057 MLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPE 1100 KF Q ++ N RG D + ++Q+ Sbjct: 1019 -----------EKKFWQIWDDNFNHRGLRYDPYIDFCFQQMPDP 1051 >UniRef50_A1KCB8 DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease n=3 Tax=Betaproteobacteria RepID=A1KCB8_AZOSB Length = 1139 Score = 759 bits (1960), Expect = 0.0, Method: Composition-based stats. Identities = 333/1186 (28%), Positives = 520/1186 (43%), Gaps = 129/1186 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M + SNR + L+A++ + ER PF ++V S+ + + +++ +++ G+ AN+ Sbjct: 1 MFSIVFSNRYECLQAMLLERLAAERP-GPFGKRHVVVPSSALRRDVELAVAEHEGVCANV 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDF----TLLRHYLT 116 +F A ++W V+ E+P S F ++W++ LL D+ L HYL Sbjct: 60 EFSYLAQWLWTQIGHVV-EVPARSPFAPALLAWRVHALLDPAAPAGDWVAAHPRLAHYLA 118 Query: 117 DDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGH------LVEGLGEAQAWQAPLWK 170 +D R F+L+ + A +FD YL YR WL W G E +AWQA LW+ Sbjct: 119 G-ADARMRFELAERIARVFDHYLTYRAHWLESWARGERARLGEATEAERADEAWQAALWR 177 Query: 171 ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL 230 + + L + H A L+ R + ++ GLP V + G+ ALPP+YL L+ L Sbjct: 178 HIRD---GLALRQEHPAALFLRRVAGMDERALAAAGLPQTVHVFGLPALPPLYLAILREL 234 Query: 231 GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 + +++ L NPCR +W +I DP L+ L RQ +D Sbjct: 235 ARVVDVRLYALNPCREFWFEIVDPRRLSWLAARQ------------------------AD 270 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLE-SSQELDAFVDVTPDNLLHNIQSDILELENRA 349 + GN LLA+WG+ + +I LL + E E F +LL + + IL++E Sbjct: 271 MFHETGNRLLAAWGQQTQAHIGLLFEGEREVVEEALFEPHPGRHLLARLHNAILDMEELE 330 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE----EDPTLTP 405 V + D SI HVCHS RE+EVLHDRLL +++ L P Sbjct: 331 PGSVALA------------ANDRSIELHVCHSRTRELEVLHDRLLDLMKAAAKRGEPLRP 378 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 +I+V+ D+D+ +P I+AVFG+APA R +P+ I+ Q +PV A LL+L R Sbjct: 379 DEIVVLTPDLDATAPLIEAVFGTAPAARRIPWRITGLGGTQENPVAAALDRLLALVAGRL 438 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE---LPATGQH 522 + V LL PV+AARF + E L + W+ +GIRWG+D ++ + A G H Sbjct: 439 PASAVFDLLQQPVVAARFGLGEGDLETIHDWMRAAGIRWGLDAEHAAAAGGVPVQACGGH 498 Query: 523 TWRFGLTRMLLGYAMESAQG--EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 T GL R+ LG+A A + + + G A +G L + L R L + Sbjct: 499 TLDAGLDRLFLGWAAGDAATAAPFAGFIGAGAAEGNAALALGRLWRYVDTLRGLRADLQR 558 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA----VPLSL 636 + W L + E A+ + + A+ A D +PL++ Sbjct: 559 PQQAAGWRRALDSALTRLVGDEPEWAEALREVREAIVALTQAMAAAATDDGDAPAIPLAV 618 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + L +LD G V L +R +P++VVC++G++ G++P P FDL Sbjct: 619 VHPALIAQLDD-PARGGVPGGTVTFSALSSLRGLPYRVVCVVGLDQGLFPGSDRPAEFDL 677 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 M+ +P+RGDR RR DDR LFL+ L+SA++ L++S++GRS++D S PSVLV EL D + Sbjct: 678 MAARPERGDRQRRHDDRNLFLDVLLSAREVLHLSHVGRSVRDGSALPPSVLVDELFDVLA 737 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP-----GERQSYAREWL---- 807 + + + A + LT H F + + P SY E+ Sbjct: 738 AACAADPGKP----DDLAAARRRLTVEHPLQAFSAEYFLPQGERDPRLVSYHEEYAAALA 793 Query: 808 ----------------------PAASQAGKAHSEFVQPLPFTLPE--TVPLETLQRFWAH 843 + G F PLP PE V L L RF+ + Sbjct: 794 ARLGAPLRDADDDALVALAEEGDEVAVDGARVPFFDAPLPPPGPEWREVGLPQLIRFFRN 853 Query: 844 PVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ--DDAERLFRRF 901 P R + RL + ++E+ D EP + + L R + ++LL AL+ D E L Sbjct: 854 PSRYLLRDRLGLALPEGEAELEDVEPMVPDFLGRQALAERLLPALLGATVPDEEALLALA 913 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG------QSMEIDLACNGVQITGW 955 RA G+ P GA GE + ++ A V A ++ DL + Sbjct: 914 RAGGEYPAGALGEGALRRELAQLTVFAAGVRAELPARPLPPHVPTLAFDLDGEPWTLGAA 973 Query: 956 LPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGES--RLFLRKDGEWRFPPLAA 1013 ++P GLLR R + WL HLV CA+ + L +DG RF + Sbjct: 974 FGDLRPQGLLRQRYDDCRPVDYLAAWLAHLVLCAAPAPDVACETTLLARDGRCRFVAVPP 1033 Query: 1014 EQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQ 1073 A L+ + YR G+ PL P++ A+ + ++ KA ++ Sbjct: 1034 ATAHALLADCLRLYRAGLLRPLHFFPKAAWAYA------------VNGESMGKAYARWQG 1081 Query: 1074 AYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRF 1119 GN E D Y+ R + + + R L PL Sbjct: 1082 ---GNRPAFAESADPAYRLALRGVADPLADDFAALASRVLGPLLDH 1124 >UniRef50_B4RTM0 Exodeoxyribonuclease V, gamma subunit n=3 Tax=Alteromonas macleodii RepID=B4RTM0_ALTMD Length = 1206 Score = 755 bits (1950), Expect = 0.0, Method: Composition-based stats. Identities = 304/1120 (27%), Positives = 504/1120 (45%), Gaps = 143/1120 (12%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +Y SN+L+ L L+ ++ ++ L D F PE ILV+S GM W+ M ++ K G+A NI Sbjct: 1 MLALYPSNKLEHLSFLLTTLLRQQPL-DVFTPETILVESPGMQHWVSMQMANKQGVAMNI 59 Query: 61 DFPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQ--LLEREDFTLLRHYLT 116 DFPLP F+W+ VL ++PK+S + ++ ++W++ +L L++ + F + Y Sbjct: 60 DFPLPVRFMWNTARTVLGADKVPKQSPYRREVLTWRIDNVLQDNALMDSDAFEQVNKYWQ 119 Query: 117 ----DDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKAL 172 + + QL++ AD+++QYL+YRPDWL +WE + + WQ+ +W+ L Sbjct: 120 SAGSEQEQGLQRLQLATALADVYEQYLLYRPDWLFKWENNER-AVFDDMEVWQSEIWRIL 178 Query: 173 VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGK 232 + H A L+Q +E LE+ P LP RV + I+ + P + AL + Sbjct: 179 AKDQ------PLHPARLHQMMLEALEAGNV-PAHLPKRVIVFAINTMAPQLIAFFDALAQ 231 Query: 233 HIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE 292 HI+IH+ NP YWG+ K + AKLL + + E Sbjct: 232 HIDIHIFHLNPSVNYWGEAKSSSEQAKLLRLEGLKKWM---------------------E 270 Query: 293 QDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDN---------------LLHN 337 +D NPLL + GK GR+ LL++L++ E+ AF ++ LL Sbjct: 271 EDQSNPLLGNLGKQGRELFNLLTELDTF-EISAFDSPDFESAGEGEDEHGQCHSRGLLDY 329 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 I +DIL+ + + D S+T HS REV+VLHD LL L Sbjct: 330 IHNDILQAAHPQPLIHQSKN------------KDDSVTVMCTHSALREVQVLHDHLLHWL 377 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGS-------APADRYLPYAISDRRARQSHPV 450 +D T TP DI+VM I++Y+PF+ AVF A LP I+DR + P+ Sbjct: 378 SQDKTRTPSDILVMCPAIENYAPFVDAVFHRVGTKSLGATGQVRLPCTIADRSPMDAEPL 437 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 + AF++LL LPDSRF D+L L + + RF ++++ + + W+ ++ I WG++ + Sbjct: 438 IAAFMALLQLPDSRFGVSDILDYLQLDSVQKRFSVSQDDIEQMVVWLKQAHIHWGLNSAH 497 Query: 511 VR--ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 + ++W +G+ R+L+G ++ VL + G A +G L ++ Sbjct: 498 KTAVSEGVNLDDTYSWWWGIRRLLMGMLAPDSEMIVSDVLTIPDVEGQSALTLGKLIEVV 557 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 L + + L Q R E+W + +A F+P + + + LI + + A A Y Sbjct: 558 ALLGEFAQELTQPRTPEQWSKALIALRDACFMPTKDQQQSWDLIAKVAADLAARCEEANY 617 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + L +RD L R F+ G V +C+++PMRSIPFK VC+LG+ND +PR+ Sbjct: 618 EHELTLRQVRDLLLNRFSSPDAGNHFMTGQVTVCSMLPMRSIPFKKVCILGLNDSEFPRK 677 Query: 689 LAPLGFDLMSQKPKR-GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 +PLG DLM+ +R GDRSRR +DRYLFLEA+IS ++ LY+SY G + +NSER PS++ Sbjct: 678 SSPLGLDLMASDGRRVGDRSRRLEDRYLFLEAIISTRESLYLSYQGNDVTNNSERQPSLV 737 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 + E +D + ++ L PF + G SY WL Sbjct: 738 LAEFMDMLENNYALS--------------LEKYAVHAPLHPFSEPVF-AGALPSYETGWL 782 Query: 808 PAA-----------------------SQAGKAHSEFVQPLPFTLPETVPLE--TLQRFWA 842 A + A ++ Q + + L + R + Sbjct: 783 RLADALQHNKFGANAADTNENADVVDTSLDTATADISQSPRALATQALRLSNMQIARAFK 842 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD--------- 893 P+ F RL VN + + ++EPF L RYQ+ + ++ + Sbjct: 843 DPLEHFSIQRLGVNLSQSFTLLENSEPFETNALLRYQVLDAIFSSPERNNSSELDASELT 902 Query: 894 -AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQI 952 +E++ GD+P E + L+ + P + G I Sbjct: 903 YSEQVITFASLRGDIPNNPVAMDEVEMWKEGALALSQAM----GPHDAEPKKAQFQGKYI 958 Query: 953 TGWLPQVQP-DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKD-------- 1003 T ++ D L+ + + + ++ L++ +S + + Sbjct: 959 TFTTSALEGSDALVELCAGKVDAHRALGFFISQLIFSSSDETTSYTHYPLEIYACSWEKG 1018 Query: 1004 ----GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLP 1039 + +F + E A+ L + + Y +AP V Sbjct: 1019 ETILKKQKFAAVERETAVQLLLFIEQLYMAIYTAPTPVHL 1058 >UniRef50_D2PR48 Exodeoxyribonuclease V, gamma subunit n=12 Tax=Actinomycetales RepID=D2PR48_9ACTO Length = 1102 Score = 751 bits (1939), Expect = 0.0, Method: Composition-based stats. Identities = 300/1180 (25%), Positives = 492/1180 (41%), Gaps = 143/1180 (12%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG------ 55 L ++ + R DVL + ++ L DPF E+++V + G+ +WL L+ + G Sbjct: 3 LYLHRAERTDVLADGLGELLAT-PLADPFAEELVVVPAKGIERWLSQRLAHRLGAAEGSG 61 Query: 56 --IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRH 113 + A + F P S + VL + ++ + +M+W L+ +L + L+ + Sbjct: 62 DGVCAGVRFTSPRS----LVSAVLG-LDQDDPWAADAMAWPLLAVLDESLDDAWCEPVAR 116 Query: 114 YLTDDSDKR-------KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEG----LGEAQ 162 +L + + ++++ A LF Y V RP L W G +G + + Sbjct: 117 HLGQFDSGAEAELRRGRRYAVAARLARLFAAYAVQRPALLVDWGDGRDTDGRGVTIDDDL 176 Query: 163 AWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPV 222 AWQ LW+ LV+ P H + + Q + LP+R+ + G + LP Sbjct: 177 AWQPELWRRLVDRIDAPPPPARHLSTVAQL------RDRSESLDLPARLSLFGHTRLPLT 230 Query: 223 YLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSEN 282 ++ L AL +H ++HL +P W + Sbjct: 231 EVELLSALAEHRDVHLWLPHPSGELWDRL---------------------------TGRT 263 Query: 283 AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDI 342 AG Q +PLLA+ G+ R+ L+ + + + ++LL +Q+D+ Sbjct: 264 AGDRAADTSHQMAEHPLLATLGRDSRELQLALAAV-PAVDRHLPSPAARESLLGWLQNDL 322 Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 + A R D S+ H CH R+V+VL D LL ML+ DPT Sbjct: 323 RGNKVSAEG-------------RRPAAEDRSVQVHACHGTARQVDVLRDVLLGMLQADPT 369 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRY------LPYAISDRRARQSHPVLEAFIS 456 L PRDI+VM DI++Y+P I A FG DRY L ++DR Q++P+L Sbjct: 370 LEPRDILVMCPDIETYAPLISARFGLGDLDRYGHPAHRLRVQLADRSLTQTNPLLGVASQ 429 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 LL L SR + VL L + + RF T++ L + WV E+G+RW D + L Sbjct: 430 LLDLAGSRATASQVLDLAETEPVRRRFRFTDDDLDTVTAWVREAGVRWAFDRGDRDRFGL 489 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSV-LPYDESSGLIAELVGHLASLLMQLNIWR 575 Q+TWRFGL R+L G M + W LP D+ EL G A + +L Sbjct: 490 ADYPQNTWRFGLDRVLAGVTMSADAHAWIGTTLPLDDVGSTRIELAGRFAEYVDRLRAAT 549 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 L +PL WL RD + A+ + + +++ + A + L Sbjct: 550 DRLDGTQPLATWLDALRDGIERLTRVGADDGWQVGQVHREFAEVAAGAGELAVT-PLRLP 608 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 +R L+ L F +G + +CT++PMRS+P +VVCLLG++DGV+PR G D Sbjct: 609 DVRSLLSAHLAGRPTRANFRSGSLTVCTMVPMRSVPHRVVCLLGLDDGVFPRFGLADGDD 668 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 ++++ P G+R R +DR L L+A+++A + L I+Y G + R P+V + EL+D + Sbjct: 669 VLARCPVTGERDVRSEDRQLMLDAILAATESLVITYTGANEYSGQPRPPAVPLGELLDAL 728 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER-----QSYAREWLPAA 810 + +E+ V+ + H PFD +N + G ++ L AA Sbjct: 729 DR-------------TTESPVRETVVVNHPLQPFDRKNLEAGRLGTPGPFTFDPAALVAA 775 Query: 811 SQAGKAHS----EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 G + +PL E V L L F+ PV+ FF+ L V E + D Sbjct: 776 RVGGGSRPPRPAFLAEPLTLPGGEDVALADLLAFFRDPVKGFFRA-LDVTLPWEVDGVSD 834 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 P ++ L ++ + ++L ++ + G LP G G + Sbjct: 835 AMPVEIDNLEKWSVGDRMLRDMLAGIHPDAALNAEWRRGTLPPGRLGWRTATDLRDIARG 894 Query: 927 LADRVIACRQPGQS---MEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLE 983 LA RQ G + +++DL G ++TG +P V L+ S L Q + W++ Sbjct: 895 LAVAAYPHRQGGATAYDVDVDL-GGGRRLTGTVPGVHGYRLVSVSYSRLDAKQLLTSWIQ 953 Query: 984 HLVYCASGG-NGESRLFLRKDGEWR------FPPLAAEQALHYLSQLIEGYREGMSAPLL 1036 L A+ + + L + + R F P+ A QA L+ LI Y G PL Sbjct: 954 LLALSANDEDHNWTALAIGRPRSGRTPASRLFGPVGA-QARTLLADLISVYDGGRREPLP 1012 Query: 1037 VLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ 1096 + ++ AW + DD + A ++ A GE D + R+W Sbjct: 1013 LPLKTSFAWCQARRT--------DDEPMIAAGRRWRPA-----NYDGENADPAHVRVWGP 1059 Query: 1097 LTPETM---------------EAIVEQSQRFLLPLFRFNQ 1121 P + + + R P+ RF Q Sbjct: 1060 NAPLKVLLEPTRPGEQWPGEPTRLGAYAARVWEPMLRFEQ 1099 >UniRef50_Q6ANK2 Related to exodeoxyribonuclease V, gamma chain n=1 Tax=Desulfotalea psychrophila RepID=Q6ANK2_DESPS Length = 1056 Score = 745 bits (1923), Expect = 0.0, Method: Composition-based stats. Identities = 306/1134 (26%), Positives = 497/1134 (43%), Gaps = 93/1134 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML ++ SN + L ++ I++RE + F E+ L+QS G+ + + L+ +F N Sbjct: 1 MLHLHISNHTEKLLEILAAIIKREGRANLFAREIFLIQSPGVERTVCQYLADEFKSWCNF 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DF LPA + + + ++ + F Q+ W+L LL + + + + L+ Y++ + Sbjct: 61 DFLLPAGLLRKIASSLYVDL-ETDLFASQTTVWRLEALLRDI-DEDIYLPLKKYVSGEVA 118 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + K +QL+ + A LFDQY + RP LA+W G V + + WQ LW+ LVE Sbjct: 119 ELKRYQLAGQIAQLFDQYQLMRPSMLARWRLGQRVTE-EDCEIWQMHLWQRLVEEF---- 173 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 H+ + + IETLE C LP R+F+ G+ + P++L+ LQAL E+HL Sbjct: 174 PAARHQGEILENIIETLEK-EECQRRLPRRIFVFGLHTMAPLFLKFLQALSSRTEVHLFL 232 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 +PCR YWG++ DR L L ++ L + + + LL Sbjct: 233 LSPCREYWGEV---------------GRGGDRLLSLEGIRDSGVDLSSYEE--EEPQQLL 275 Query: 301 ASWGKLGRDYIYLLSDLES-SQELDAFVDVT---PDNLLHNIQSDILELENRAVAGVNIE 356 AS G+ GRD+ +L S + + + P +LLH +Q DILE AV Sbjct: 276 ASLGRQGRDFQQMLVASAGYSIDSALYQGLGAGSPPSLLHVLQGDILERGRLAVT----- 330 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 D S+ CHSP RE+ VL D +L +L +D +L RDI+VM DI Sbjct: 331 -----------AARDDSLRIVSCHSPLRELAVLKDHILDLLYKDASLQLRDIVVMAPDIQ 379 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y+P I A+F + Y+I+DR Q + V+ F+ L+L RF +VL LL Sbjct: 380 EYAPLIPALFAD------IQYSIADRATGQRNTVMAVFLDYLNLFSGRFGWSEVLDLLRS 433 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 + ++F + E L++WV ESGIRWG+ + +EL LP +TW GL R+LLG+A Sbjct: 434 EHIYSQFSLGEGDFDLLQKWVTESGIRWGLSAEQRQELGLPPLELNTWLAGLQRLLLGFA 493 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 M A + VL Y + G A+ +G L L L + R L EW + + Sbjct: 494 MS-ADTMVEGVLAYSDIEGNSAQALGGLCEFLQVLQGGQELYTTPRLLHEWAELLQGDAE 552 Query: 597 AFFLPDAETE-AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 F + + + I Y + ++ L Q Q S FL Sbjct: 553 RLFGGEENSAHQELQQILAGLGRGREYQGVLLYSQPIAFQVVMAWLQQASAQVGSSAGFL 612 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 G + C+++PMRSIPF+V+CLLG+N+G +P+Q FDL++ KP+ GDRS R DDRY Sbjct: 613 RGQLTFCSMLPMRSIPFRVICLLGLNEGKFPKQDKQATFDLLASKPELGDRSPRIDDRYQ 672 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 FLEALIS + LY+SY+GRSI++N E PS + + + A Sbjct: 673 FLEALISVRDSLYLSYVGRSIKNNGEIPPS--------------VVLCELLDLLECKFAI 718 Query: 776 VKAHLTCLHTRMPFDPQNYQP-GERQSYAREWLPAASQAGKAHSEFVQPL----PFTLPE 830 + PF + ++ + SY L A + +P E Sbjct: 719 KPEDIVVEQPLHPFSSKYFEGRADLFSYNENCLTLAQKIYGGGGGEERPWWSGNLGRPQE 778 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE 890 + L + F+ +P R F L++ DTE F GL RY + Q L+ L+ Sbjct: 779 NIYLADMVSFYKNPQRWFVSRSLEIRLGASSDLPDDTETFSASGLDRYLLEQGLVEDLLA 838 Query: 891 QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG--QSMEIDLACN 948 + ++ G P G G + ++ E+ + + + Q++ ID Sbjct: 839 GREVADIYHGLAIEGRWPQGTPGSLLFKKLLTELDEFTNSIRQIDPGPIIQTLPIDQRIG 898 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRF 1008 ++ G + ++ +G+ R + ++ WL HLV + + L + KDG +F Sbjct: 899 PYRLLGKVA-LRQNGIFLHRYANRKGKDLLEAWLYHLVAGRERPDIITWL-VCKDGVLKF 956 Query: 1009 PPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKAR 1068 +E+ L +E + G++ E+ A+ C + Sbjct: 957 SEQPSEE---MLLLYLEHFAFGVNTLSSFQVEAAYAYSLHCQKKSKKTPM---------- 1003 Query: 1069 TKFLQAYEGNMMVRGEGDDIWYQRLW-RQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 + +G++ G + + +LP++ + Sbjct: 1004 QVAEETLKGSVTK---GYEPELALAISGGVEEFLAGEFERYCIELMLPIWEYAD 1054 >UniRef50_B0TXZ0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Francisella philomiragia RepID=B0TXZ0_FRAP2 Length = 1100 Score = 741 bits (1912), Expect = 0.0, Method: Composition-based stats. Identities = 282/1160 (24%), Positives = 514/1160 (44%), Gaps = 102/1160 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L Y SN+L+ L ++ +++ E+ D F P ++V S GM WL M L+Q IA N+ Sbjct: 3 LYTYPSNKLEYLVQVLSKLLDVEKK-DFFTPTQLIVGSRGMQHWLSMQLAQYRNIAMNLK 61 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 + + +I D+ + + + A+ K ++W++ L + L+ Y + Sbjct: 62 YDMINGYILDICYELTAKQEYKKAYTKDILAWRIFRSLDSINN----PKLQEYYHNS--D 115 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEG--LGEAQAWQAPLWKALVEYTHQL 179 K +QLS K A +F Y++YR +WL +WE G + + WQ LW+ALV+ Sbjct: 116 LKKYQLSVKIAQVFTMYIMYRAEWLQKWEQGEYINPAKPENDEDWQMQLWQALVKEVQDT 175 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 + ++ L +P ++I G++ + P L + L K+I++++L Sbjct: 176 PYK------VQAEALQKLNQQNLEKLNIPKDIYIFGVNTISPKNLSFVFELAKYIDVNIL 229 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 + NPC YW D+ A L + PL Sbjct: 230 YINPCSEYWYDLHKSKISAWLDSNDYELQ-----------------------------PL 260 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 LA+ G+ G+++ L + + QEL+ F ++L +D N+ Sbjct: 261 LANLGQQGKEFFNQLLENQEKQELEVFEKFDKNSLDFEKLAD----NNQTQLVSLQRNLL 316 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 D + D SI+ + CHSP REV++LHD+LL M++ DP++ PRDI+VM +I+ YS Sbjct: 317 ELDCQNHAKQKDLSISINSCHSPLREVQILHDKLLDMIKADPSIKPRDILVMCPNIEDYS 376 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 P+I +VF D+ LP +I+DR S P+ +FI LL LP+S F +L L VP + Sbjct: 377 PYIDSVFSRFSTDKKLPCSIADRTLLDSEPLAASFIELLQLPESNFEVNKILDYLSVPAI 436 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 +F IT+E L +R W+ ES I + +W +GL R++ G++ Sbjct: 437 QQKFKITDEQLETIRYWLKESCIHHSNNG-----------QTFSWSWGLKRLMFGFSYSD 485 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASL--LMQL------------------------NI 573 + LP ++ + G + L QL Sbjct: 486 SNHIVDLKLPRQSATATPSYQRGISINYQELDQLMTIPVIEGSEIAELGGLYELLELLEK 545 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 + + L + R LE W +M + F + + I+ + + + Sbjct: 546 YSQELLKPRSLEAWQDYLLEMFDDVFNVTNDEQYIAKKIKDIIVKTVTTAKDVLLTEEID 605 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L +R L +L + I+ FL G V C++ PMR++PF+V+ +LG+N+G +PRQ + + Sbjct: 606 LYTIRYCLISQLSEPIINNHFLNGKVTFCSMTPMRNVPFRVIAMLGLNNGKFPRQESAIS 665 Query: 694 FDLMSQKPK-RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 FDLM++ + +GDR++RDDDRYLFLE + SA+ LY+SYIGRS++ N E+ PS++++ELI Sbjct: 666 FDLMARLGRVKGDRTKRDDDRYLFLETITSARDYLYLSYIGRSVKTNVEQQPSLILKELI 725 Query: 753 DYIGQSHY-LPGDEALNCDESEARVKAHL---TCLHTRMPFDPQNYQPGERQSYAREWLP 808 Y+ +++ D + ++ + ++ + PF + Y E +SY WL Sbjct: 726 SYLQKNYSWHTLDNVIKDNKLPKSERKNIISDIKEYPLHPFSSKCY-ADEYRSYDEAWLK 784 Query: 809 AASQAGKAHSE-FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 K + + LP+++ + L + + P++A+ L++ + E+ D+ Sbjct: 785 LLQSEPKVFYDSKLLSNSVNLPKSLSISKLVKIFEDPIKAYTNYGLELYLEDDFEELEDS 844 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 EPF + L +++ Q LLN L D E + + +G LP E + + +Q+L Sbjct: 845 EPFDINSLDKHKFKQDLLNTLENNKDKELTIKTAKLSGKLPESVLTENEINKEVESIQKL 904 Query: 928 ADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVY 987 D+ + ++ ++ + + +L + S + +L+L L+ Sbjct: 905 LDKANLANYESKYFHQEILGYELEANCHIKD---NQVLLYTSSTFGIKHRFELYLTALLV 961 Query: 988 CASGGNGESRLFLRKDG------EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPES 1041 S S ++ D F ++ A L + + + +S P LV + Sbjct: 962 ALSEQQDISATYVYFDKDKNQADTNTFA-ISHLGAKQLLEKYLSNAEKIVSKPSLVHLDL 1020 Query: 1042 GGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPET 1101 A ++ + Q + T ++ + + + + ++ Y +L+ P+ Sbjct: 1021 AKAIMEYVKENQKKDASLVEKTTKQKQQAWENVIKSSETNYKALENNSYFKLFYSEHPKI 1080 Query: 1102 MEAIVEQSQRFLLPLFRFNQ 1121 + +Q + + N+ Sbjct: 1081 EDFEGQQIYQDFFEVINENK 1100 >UniRef50_C8XGX0 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XGX0_NAKMY Length = 1141 Score = 738 bits (1906), Expect = 0.0, Method: Composition-based stats. Identities = 289/1198 (24%), Positives = 468/1198 (39%), Gaps = 141/1198 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG------ 55 L V+ + R D A + E DPF +++ V + G+ +WL L+ + G Sbjct: 3 LHVHRAQRADA-LAAALGDLLAEPPADPFGVDVVAVPTRGVERWLTQRLAHRLGTRDGRS 61 Query: 56 --IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRH 113 I A + FP P + + + L + + + W L+ + + LL Sbjct: 62 DGICAAVRFPSPTTLVDE-----LAGDRADDPWTPDAAVWPLLAAIEASVHEPWCALLAE 116 Query: 114 YLTDDSDKR-------KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGE----AQ 162 +L D + + ++ + A LFD Y +RP+ +A W G +G GE Sbjct: 117 HLGYRGDDAQAEHRRGRRYAVARRIAGLFDGYAEHRPEMVAAWSQGGDDDGWGEPVPADL 176 Query: 163 AWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPV 222 +WQ LW+ L + P A + R LP RV + G +ALP Sbjct: 177 SWQPRLWRRLRDRI-DAPDPVATFAQVAARLAA-----DPGAVDLPERVSLFGATALPHR 230 Query: 223 YLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSEN 282 + L AL H ++HL +P W + + R+R Sbjct: 231 QVLLLSALAHHRDVHLWLPHPSPVLWDRVGELRPPVPGRIRRRDDPTAGAAT-------- 282 Query: 283 AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDI 342 +PLLAS G+ R+ +L+ ++ D P LL +Q D+ Sbjct: 283 --------------HPLLASMGRDVRELRTVLAGR-IDRDTWHRADDPPATLLGRLQRDL 327 Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 + + K +D D S+ H H P R+V+VL D ++ +L +DPT Sbjct: 328 SDNRRPGPGMAD---------KPVVDATDDSVRVHAAHGPGRQVDVLRDVVIGLLADDPT 378 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPA------DRYLPYAISDRRARQSHPVLEAFIS 456 L P DI++M DI++++P +Q FG A + L ++DR RQ++P+L Sbjct: 379 LHPADILIMCPDIEAFAPLLQGAFGLADSVPDGHPAHQLQVRLADRALRQTNPLLATLDR 438 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 LL L SR + DVL + RF ++ L L WV +G RWG+D ++ R L Sbjct: 439 LLDLAGSRVTASDVLDFAAFAPVRHRFGFDDDELSTLADWVAAAGARWGLDAEHRRRYGL 498 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQG-EWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 GQ+TWR L R+LLG M G ++ LP DE +L G LA L+ +L Sbjct: 499 AEYGQNTWRAALDRILLGVCMSDEPGNRLETALPLDEIGSADVDLAGRLAELIDRLATVV 558 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD-AVPL 634 L+ ++ W + + A + + A+ A + L Sbjct: 559 DTLSSRHSVQRWCAELLAGVQSLTSVPARAAWQVAEFRAEVAAVQRHAAAAGSTGLELGL 618 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 + +R LA L F G + +CT+MPMRS+P +V+CLLG++DGV+PR G Sbjct: 619 ADVRALLAGALAGRPTRANFRTGTLTVCTMMPMRSVPHRVICLLGLDDGVFPRGAREDGD 678 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 DL+ ++P G+R R DR L L+A+++A +KL I+Y G + ++R P+V V EL+D Sbjct: 679 DLLIREPACGERDLRSQDRQLMLDAIVAATEKLVITYSGADERTGAQRPPAVPVGELLDA 738 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER-----QSYAREWLPA 809 + + + V+ + H PFD + G ++ L Sbjct: 739 LDDT---------ATTATGGAVRDLVLVRHPLQPFDARTLTAGALGRVGPFTFDPVALGG 789 Query: 810 ASQAGKAHS------EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE 863 A P P P V L + HP + F + RL V E + Sbjct: 790 ARALAGPRRPAGRLVPAPLPAPDRPPADVELAEVIEVLTHPAKGFLRRRLDVAVPFEQDD 849 Query: 864 IPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQE 923 PD P L+ L + + ++L + + + G LP A G E ++ Sbjct: 850 PPDDLPVDLDALQEWGVGDRILRDRLAGVPEQECRQAEWRRGVLPPAALGGRALERVLRD 909 Query: 924 MQQLADRVIACR-QPGQSMEIDLAC-NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW 981 ++ L DR R P ++E+ + +G ++ G + V GL+ S L+ +Q W Sbjct: 910 VRPLVDRTATLRAAPRHTVEVSVPLPDGRRLRGTVGGVHGIGLVTVSYSKLAPRARLQSW 969 Query: 982 LEHLVYCASGG------NGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPL 1035 L L AS R + L E+A L L+ Y EG+ APL Sbjct: 970 LAFLALTASDPALAWTAAAVGRAERGRPQCATLAALPGERARELLIDLVGLYEEGLRAPL 1029 Query: 1036 LVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR 1095 + ++G + KA+ + + G GE D R+W Sbjct: 1030 PLPLKTGEKYADARRRG---------MDHDKAQDQAAATWTGGKY-PGERQDAANMRVWG 1079 Query: 1096 QLTPETM--------------------------------EAIVEQSQRFLLPLFRFNQ 1121 + P ++ + R PL + + Sbjct: 1080 RDAPFSVLTGSGTDPDTGIDTGTDPGIDADTGTDRGTATGRFALLAGRLWRPLQQHEE 1137 >UniRef50_C4GHY2 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GHY2_9NEIS Length = 1184 Score = 736 bits (1901), Expect = 0.0, Method: Composition-based stats. Identities = 320/1233 (25%), Positives = 529/1233 (42%), Gaps = 172/1233 (13%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +Y SNRL+ + ++ I + L++PF E I++QS GM +++ L+++ GIAAN+ Sbjct: 1 MLHLYQSNRLEDIAQMLARIQQVAPLENPFAAEEIVIQSQGMRRYISQYLARETGIAANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLL--PQLLEREDFTLLRHYLTD- 117 F LPA W + +P+IP S F+ + M W+L+ L + + DF R L Sbjct: 61 RFSLPAGLAWRLMREAMPDIPALSPFSSEVMRWRLLALFQSDEFAQSPDFAAARQALAPY 120 Query: 118 -DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGL-----GEAQAWQAPLWKA 171 + +QL+ + AD+FDQYLVYRPDW+ W G LV L + Q WQA LW+ Sbjct: 121 LHNGDYAAYQLAGQLADVFDQYLVYRPDWIETWAAGKLVPELAHSRSADTQIWQAQLWQH 180 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 L Q HR L++ +++L P LP R F+ GI+ L P+YLQ L L Sbjct: 181 L----DDGKQGAPHRVQLWRTLMQSLARPN---PRLPQRYFVFGIATLAPMYLQLLAQLA 233 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 +H ++H+ NP + YWG+I +PA + + Sbjct: 234 QHSQVHIFALNPSQAYWGNIIEPAQILNQ--------------------------TQTAD 267 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFV-DVTPDNLLHNIQSDILELENRAV 350 G+PLLAS GK GRD+ L+++E+ +LD++ + +LLH+IQ I Sbjct: 268 LSYQGHPLLASLGKQGRDFFNELAEVEAQLDLDSYTSEPQSPSLLHSIQYHIQSQTLPET 327 Query: 351 AGVNIEEFSRSDN------------------KRPLDPLDSSITFHVCH------------ 380 A N + D + L P S+ + Sbjct: 328 AHANGWLAAHQDYVHSQPRFQAAQQQLNQQYQTALAPYQGSLKTNAVSFGEAKTPNTPNT 387 Query: 381 ---------------SPQREVEVLHDRLLAM----------------------------- 396 + R++++ H + LA+ Sbjct: 388 NETPDLFSGCLTPEQNAIRQIQLTHQQNLALAQLNADPSIQIHSAHSPLRELQILKDQLL 447 Query: 397 --LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 L + P P DI ++ I+ Y+P+I+A+FG + LPY++SD + P+L+A Sbjct: 448 VLLAQHPDWQPHDIAILTPHIEPYTPYIEAIFGK-HSPYPLPYSLSDTQIAHRQPLLDAL 506 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 L+L DSRF ++ ++ALLD ++ A +T + L + + + IRWG D + Sbjct: 507 AQTLALMDSRFEADKLIALLDNELILATHRLTRDDLPLIHDTIAQLNIRWGSDAAQRSQH 566 Query: 515 ELPATGQHTWRFGLTRMLLGYAMES--AQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 Q+TW+ GL R++LG+ + A W ++ P+ + A + A+L+ L Sbjct: 567 SSQPNAQYTWQQGLERLVLGFMLPENPANPLWHNIAPHSSNPSHQA-PLSRFAALVATLI 625 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLP-DAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 + + +W +++N P + A +E E A Y Sbjct: 626 RHQNQWQTPATVPQWNERIHNLMNDLITPQSDDDHQAHQQLEAALAQWQNEAQTAHYTQT 685 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 + ++ L Q L + FL G + IC+++PMRS+PFKV+CLLG+NDG YPR Sbjct: 686 INQTIAIQHLNQYLASQN-DAGFLRGGITICSMVPMRSLPFKVLCLLGLNDGDYPRNTKA 744 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 +DL++Q P++GDR+RRDDDRYLFLEA++SA++ LY+SYIG+ I+ + ER PS L+ EL Sbjct: 745 APYDLIAQHPQKGDRARRDDDRYLFLEAILSAREVLYLSYIGKDIRTDEERAPSTLIGEL 804 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY--------QPGERQSYA 803 ID I +P ++ + H H PF P+ Y + S Sbjct: 805 IDTIAALTQIPANQ----------LNQHWITQHPLQPFSPKYYTGSLKNHSSAAKLISTR 854 Query: 804 REWLPAASQAGKAHSEFVQ---PLPFTLPE-TVPLETLQRFWAHPVRAFFQMRLQVNFRT 859 +++ A + + F+Q P T + +P T ++W +P R + + L Sbjct: 855 QDYAQALNTPQPPAAPFLQNYTPAHETQEQPEIPQATFLQYWRNPNRQWLKHTLGWQAPH 914 Query: 860 EDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET 919 + P +EPF ++ Q++ A D L A LP G F + + Sbjct: 915 TQAAHPSSEPFTIDNPR--QLDTAYTQARQHNQDFAELATTLTAQSQLPTGEFNTLIAQE 972 Query: 920 QCQEMQQL-ADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRW---------RP 969 Q L ++ + + R P Q+ + L + L G + + Sbjct: 973 QAIAAAGLNSELIQSPRHPDQTGSLKLPTG--TLNYTLSHNHQHGQILYAHQFLPNHNTQ 1030 Query: 970 SLLSVAQGMQLWLEHLVYCASGGN--GESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGY 1027 + L + ++L L HL+Y A+ + +L PP+A E A L+Q + Y Sbjct: 1031 ATLQASDSIELLLRHLIYSAAAPQPTPQPTHYLSLHQSITLPPIAQETAQATLAQWLAAY 1090 Query: 1028 REGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDD 1087 ++G P+ P A + Y + KA+ Y + D Sbjct: 1091 QQGQQHPIPFFPRVTLAVARAYYTGKT-------PDWDKAQKAAHAVYHKGYTGFAQADY 1143 Query: 1088 IWYQRLWRQLTPETME--AIVEQSQRFLLPLFR 1118 + ++ + + ++ PL Sbjct: 1144 PETKLIYGRDDDTPINSPTFRHLTENLFAPLAD 1176 >UniRef50_C0ZQ87 Exodeoxyribonuclease V gamma chain n=6 Tax=Corynebacterineae RepID=C0ZQ87_RHOE4 Length = 1093 Score = 736 bits (1900), Expect = 0.0, Method: Composition-based stats. Identities = 276/1167 (23%), Positives = 465/1167 (39%), Gaps = 120/1167 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG----- 55 ML++Y + R D L + + ++ L DPF E + V + G+ +WL LS + G Sbjct: 1 MLKLYRAERSDTLVSALATLLRT-PLSDPFARETVAVPAKGVERWLNQRLSSQLGTSGPS 59 Query: 56 ----IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLL 111 I+ANI FP PA + + V + ++ + W ++ ++ + L +L Sbjct: 60 AVDGISANIAFPSPARLVAESVAAVSGITADDDPWSPTRLVWTVLDVIDESLGEPWCGVL 119 Query: 112 RHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEG----LGEAQAWQAP 167 +L + + F ++ +LF Y RP L W G L +G L E WQA Sbjct: 120 AKHLEGHREG-RRFASATHVTELFRSYAAQRPQMLIDWAAGRLTDGHGLALSEDFEWQAR 178 Query: 168 LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQAL 227 LW + + G A + L LP R+ + G + LP L Sbjct: 179 LWCIVADKIDVPG-----PAERLGQVSRALVE-DPALVDLPERLSVFGPTRLPVDQRMIL 232 Query: 228 QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF 287 AL + ++H+ +P W +++ R SE+ + Sbjct: 233 SALSANRDVHIWLPHPSPALW-----TKMSSRIPPR----------------SESTIRRS 271 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN 347 NPLL+S + R+ L + + P +LL +++D++ Sbjct: 272 EDGSALISANPLLSSLARDVRELQISLGA-AEFESVHLPEPAGPKSLLATVKADVIADRA 330 Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 +VA D ++ H CH P R+VEVL + LL + E+DPTL PRD Sbjct: 331 PSVAAEP----------------DGTVQVHACHGPARQVEVLRECLLRLFEDDPTLQPRD 374 Query: 408 IIVMVADIDSYSPFIQAVFGSA---PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 ++VM D+++Y+P ++A FG L ++DR RQ++PVL SLL L D R Sbjct: 375 VLVMCPDVETYAPLVRAAFGQGVHGHPGHLLRVRLADRGLRQTNPVLAVLGSLLELADGR 434 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + +VL L + RF E+ L LR+W E+G RWGI L A Q+T+ Sbjct: 435 ATASEVLDLAAADPVRTRFSWGEDELERLREWTTEAGARWGIGSRQRATFGLDAFPQNTF 494 Query: 525 RFGLTRMLLGYAMESAQGEWQSV-LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + R+LLG + + ++ W + LP D+ G +L G A + +L + R LA Sbjct: 495 NTAMDRILLGVSADESENAWLDLALPLDDVDGTDIDLTGRFAEFVDRLAVSLRDLAGPHS 554 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 EWL V L+ ++ A + + L+ +R L++ Sbjct: 555 PAEWLRVLMRALDLLTDTAPADSWQSAGAHRELVA----AVEFGGETMLRLADVRAMLSR 610 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 L F G + +CT++PMRS+P +VV L+G++D V+PR G D++S+ P Sbjct: 611 SLAGRPTRANFRTGELTVCTMVPMRSVPHRVVVLIGLDDEVFPRTGGVDGDDILSRHPVV 670 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 G+R R +DR L L+A++SA + L + Y G R P++ + L+D + + Sbjct: 671 GERDLRSEDRQLLLDAVMSAGEHLILLYTGADPVTGVVRPPAIPLSGLLDVLSATV---- 726 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 + H FD +N+ P + S+ L A A E Sbjct: 727 ---------GPEAINGVLTRHPLQSFDNRNFSPDQPFSFDTAALAGARAAAGTPIELPTV 777 Query: 824 LPFTL----PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 L L P+ V L L F HP R F + RL V D +I D+ L+ LS + Sbjct: 778 LSAELLEVHPKEVNLADLVNFLVHPARGFLRQRLGVRVPELDDDIADSLATELDPLSTWA 837 Query: 880 INQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP-G 938 + ++L + + + G LP G + QLA + + Sbjct: 838 LGDRMLLSRLAGRSSADFRAAEWRRGTLPPYNLGASVLGNVEWVVDQLAGLALPHLEGDS 897 Query: 939 QSMEIDLAC-NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESR 997 +++++D+ +G ++TG + V + ++R S L+ M W+ L A G G Sbjct: 898 EAVDVDIDLGDGHRLTGTVTGVHGNSVVRASYSSLAPKHRMTAWINLLALKAHGRPGALD 957 Query: 998 LFLRKDGEWRFPPL-----AAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDA 1052 G + A A L QL++ G+ PL + + + + + Sbjct: 958 AVSIGRGRGKIAAARSVLDAPGNAAEILQQLVDLRERGLQRPLPMWAATSAEYARRRFGG 1017 Query: 1053 QNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ--------LTPETMEA 1104 ++ A + G GE D ++ + P + + Sbjct: 1018 ---------ESVDDATNGADTQWTGQY---GEMIDPSNAYVFGEARTLAELAADPPSDDE 1065 Query: 1105 ---------IVEQSQRFLLPLFRFNQS 1122 ++R PL ++ Sbjct: 1066 FVWAEEPTRFGVLARRLWDPLLTNERA 1092 >UniRef50_B5JHV1 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHV1_9BACT Length = 1133 Score = 732 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 263/1129 (23%), Positives = 463/1129 (41%), Gaps = 63/1129 (5%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L ++ SNR++ L A + I + L P E ++ + G+A+WLQ +++ G++ D Sbjct: 35 LYLHTSNRVENLAARLVEICQAVPLSRPLSQETVMTLNPGIARWLQFEIAKATGVSFGWD 94 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 FPLP + P F + WKL+ +L L ++ F +R Y ++ Sbjct: 95 FPLPGKLFARVLRGFEPGFDTNGVFPEDLARWKLVEILSTLEDQPRFAQVRAYCQT-AEG 153 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 +++ L+D+YLVYRPD + QWE WQA +W+ LV + + Sbjct: 154 SHRLAFANRLTRLYDEYLVYRPDIVTQWEDDPGSSNFD----WQAEIWRRLVRLVYPKNR 209 Query: 182 PRWHRANLYQRFIE-TLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 H A ++Q + P P R+ + G+S+L P+YL L L ++ +H+ Sbjct: 210 KPRHIARVWQDLSRGQILELGLQPQAWPERLLVFGVSSLAPLYLDLLDQLARYRPVHIFL 269 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 P YW D+K + K+ + + D + GN LL Sbjct: 270 LQPSDMYWADLKTTKQIQKIAMKAAGETGNR-------------ITSPEDWLYETGNALL 316 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL-LHNIQSDILELENRAVAGVNIEEFS 359 S GK + ++ LL D Q+ AF ++ L +QSD+ +E+R + Sbjct: 317 PSLGKQSQMFLDLLIDKNPQQDDTAFEPPFDESSQLACLQSDLFTIEDRDL--------- 367 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 + D ++ H C +REVE + D ++ L+E+P L +I+VM DI +Y Sbjct: 368 -AKGGDAFSAYDGTLQVHSCSGRRREVETVWDLIVRRLDENPELKASEILVMAPDIQAYR 426 Query: 420 PFIQAVFGSAPADR-YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 I+AVF S +P++++D A V ++L R S +VL LL+ P+ Sbjct: 427 SHIEAVFRSKRGTHLEIPFSVADNSAGNRPGVFSGIFAILQSASGRASSAEVLELLECPL 486 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 L + +++ L + W+ E GI WG D D+ + E AT ++TW +R+ G A Sbjct: 487 LREVYSFSDQDLERIEFWIRELGITWGWDSDHRDQRESFATDRNTWSELRSRLSAGIAFS 546 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 S + L Y E G ++E G L L L R Q L W ML Sbjct: 547 SEVETPKGFLAYSEIEGELSETAGRLLECLDLLGSLRHNFRQTHSLAVWQDRLLAMLATL 606 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 + + + S L+++L+ +L+G Sbjct: 607 KSQRDDWQRDYVQASDMIHETLPALDDVFATG----SEAYRALSEKLESSASGGGYLSGG 662 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 V C+L PMR+IP VC++GMN +PR+ L FDLM+++ + GDR+ RD+DR FLE Sbjct: 663 VTFCSLKPMRAIPADTVCIMGMNRLDFPRRSNRLSFDLMAKESRIGDRNTRDEDRQFFLE 722 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 L+S + +I+Y G S ++ PS +++EL+ Y+ + L + Sbjct: 723 TLLSVRSHFFITYQGTSSNSDTVNEPSAVLEELLSYLETAMPLEDFK------------- 769 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE-------T 831 + R FDP +Q +Y + ++ + + + L + Sbjct: 770 RILTQQKRQSFDPVYFQNDRNGTYDPDRAALRNRFNGLQTSEAKAVSTELEQTQGEEISE 829 Query: 832 VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ 891 + L+ L RF++ P +AF +V +E+ + +++ + GL R+QI + + Sbjct: 830 IELDALIRFFSDPAKAFASNVSKVKLVSEEDALEESDALLSGGLDRFQIRNEFAERIARG 889 Query: 892 DDAERL-FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGV 950 + E L + LP G + ++ + QLA+ + + +DL G+ Sbjct: 890 EPLEELSIKALSQRKLLPAGLLETPTFASEYERAAQLAESIGNVETSTHYVSVDL--EGI 947 Query: 951 QITG-WLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN--GESRLFLRKDGEWR 1007 + G +++ + L + + W+ HL + + GE+ LF + Sbjct: 948 TLLGESTTRLEDGRQVLIHAGELKPKRVVDAWIRHLFAASLDPHFSGETYLFSLHEKGSP 1007 Query: 1008 FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYD-AQNDAMLDDDSTLQK 1066 E L+ L + + G +PL P + + L++ Sbjct: 1008 IRLGQVENPRKLLADLAQAFASGQRSPLPFFPVLSYNAFRAWNSCSSESEDERIGEALER 1067 Query: 1067 ARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLP 1115 AR + + R + + + EA V+ + F P Sbjct: 1068 ARKDLRASQVDSDYPRSYTWSAYDRICFGDQFEP-DEAFVKLAVAFWSP 1115 >UniRef50_D1N1Q2 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N1Q2_9BACT Length = 1095 Score = 732 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 325/1160 (28%), Positives = 511/1160 (44%), Gaps = 121/1160 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 +Y SN+L+ L A+ ++ DPF PE ++VQ+ GMA WL+ +++ I AN D Sbjct: 3 FNLYSSNKLEDLAAIFRRMIFDRPGPDPFVPETVVVQTQGMATWLEQEMARDGSIMANFD 62 Query: 62 FPLPASFIWDMFVRVLPEIPKESA------FNKQSMSWKLMTLLPQLLEREDFTLLRHYL 115 P SFI ++LP E+ F+ + +W++ LL + R + L YL Sbjct: 63 MPFLQSFILKTMRQLLPREELEAFNRECRIFSPEVAAWRIFRLLGESAGR--WPELDRYL 120 Query: 116 TDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEY 175 T RK QL+ + ADLFDQY VYR D L W G WQ L++ + + Sbjct: 121 TGSEPVRKRRQLAGRIADLFDQYQVYRGDLLEAWRRGEE----PGRYVWQQQLYREIAKG 176 Query: 176 THQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIE 235 +++F E + +P R+ + G+ +PP+YL L+ L E Sbjct: 177 FTGPY-------GWFRKFFERVPERDLW-SRVPVRISVFGVGTMPPLYLNFLRHLSAITE 228 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 ++L + NPCR +W D + + +L A + DV Sbjct: 229 VNLFYLNPCREFW-DTYEKRFRDRL----------------------ADKNSGVFENTDV 265 Query: 296 GNPLLASWGKLGRDYIYL---LSDLESSQELDAFVDVTPD----------NLLHNIQSDI 342 NPLL S G GR + L +L + + F P+ +L IQ DI Sbjct: 266 ENPLLTSLGAQGRSFFAQTLELPELARVRSAELFRSFVPEKSESLAYPGATMLQTIQEDI 325 Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 L + R G ++E ++ D SI H CH+ +RE+EVL D L+ + +E Sbjct: 326 LRMRRRGPDGDDVEVGR---TRKIDYRRDRSIRVHSCHTIRRELEVLKDELIRLFDESNG 382 Query: 403 -LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 + PRD+IVM DI++Y P+I+AVF + Y ISDR RQ + E F+ LL Sbjct: 383 AVQPRDVIVMAPDINAYEPYIRAVFNDETFEGR--YGISDRSLRQESLIAETFLQLLRQA 440 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 RF + ++L+LLD P L +F I + + LR+ V +S IRWG D R G+ Sbjct: 441 SGRFEASEILSLLDTPALRQKFRIADAEMETLRELVGQSAIRWGYDAAARRRFCDFEFGE 500 Query: 522 HTWRFGLTRMLLGYAM--ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 +WR G R+LLG+AM Q LP + G AEL+G S + L Sbjct: 501 FSWRCGFDRLLLGFAMTAPEDQLVNGEYLPCGNAEGSDAELLGRFVSFVSSLAELGERTG 560 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 E W + + ++ FF PD E+ +T + A A + +PL + D Sbjct: 561 NAHSAEAWAQLFHNAVDTFFRPDKESLPEITALRGTIDAFAAAARDGNCDEPLPLEAVTD 620 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 +L+ + + FL G + C+++P+RSIP + V LLG+N+G +PR+ LGF++MS Sbjct: 621 QLSDSFSLVQNNMPFLRGGITFCSMVPLRSIPMQAVALLGLNEGEFPRRDIRLGFNIMSD 680 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 + + GDRSR+ +DRYLFLEAL++A++ L + Y G ER P+V + +LID + S Sbjct: 681 R-RLGDRSRQMEDRYLFLEALLAARRTLMLFYHGSDPLTLEERPPAVPLADLIDVLKASF 739 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP---GERQSYAREWLPAASQAGKA 816 + H+ F+ + + P E + Y+ E+ AA Sbjct: 740 -----------------RDFEVIRHSLQSFNFRYFDPANGAELRCYSPEYFRAARSLHGY 782 Query: 817 HSEFVQPL--------PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTE 868 + +P P LP + L L+R + + F + R+ ++FRT+ D E Sbjct: 783 LAGGAEPESRLPFTLRPEPLPPVLELAELERAFLNHPEYFLRNRVGLSFRTDRCTPEDKE 842 Query: 869 PFILEGLSRYQINQQLLNALV---EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 PF L+GL YQ+ +LL+ + E E +R A G LP G+ G +ET +++ Sbjct: 843 PFTLDGLGSYQVRDRLLDWRLSSDEGPSGELAYRLMLAGGQLPLGSAGRNEFETARRQVA 902 Query: 926 QLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDG--LLRWRPSLLSVA---QGMQL 980 L A + + NG+ +TG + + PDG L S S + Sbjct: 903 ALTPEQYALLTERHAEPFAVETNGITVTGSM-FLSPDGTTQLFVHGSGSSPKHLLRLRLR 961 Query: 981 WLEHLVYCASGGNGESRLFLRKD--GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVL 1038 L V A S F KD P + A L +L+E +R+G+S PL + Sbjct: 962 HLLLTVRNAGNIPARSLGFFIKDSVEVVELPEFEPDVAEAELGRLLELFRDGLSRPLPLA 1021 Query: 1039 PESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLT 1098 A+ + A+++ + R L ++ + + R +R Sbjct: 1022 -----AYFSSACSAKDEP--------EAKRRAALAKFDPGPFDFPLDNLEGFHRCFR-PE 1067 Query: 1099 PETMEAIVEQ---SQRFLLP 1115 EA +E + P Sbjct: 1068 DFNDEAFLELVFRCADLIYP 1087 >UniRef50_A6DNF3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DNF3_9BACT Length = 1099 Score = 731 bits (1887), Expect = 0.0, Method: Composition-based stats. Identities = 300/1150 (26%), Positives = 541/1150 (47%), Gaps = 114/1150 (9%) Query: 2 LRVYHSNRLDVLEALMEFIVERER------LDDPFEPEMILVQSTGMAQWLQMTLSQKFG 55 +R+ SN+L+VL + + ++ E+ L P +++++QS GMA+W+ M ++ G Sbjct: 1 MRISASNQLEVLVSQLADSLQNEKCRPEELLGRP--NDLVIIQSRGMAKWIDMQIADHNG 58 Query: 56 IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYL 115 IA I++P +FI + V+ PKE ++++S++W++ LLP++ FT++ Y+ Sbjct: 59 IATRIEYPFIRTFISSILVKC-SYSPKEDIWDRESLAWRIFKLLPEI--ESKFTIIHDYV 115 Query: 116 TDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGE-------AQAWQAPL 168 +++ + FQL+ + A L D+Y+VYR DWL W G + +AWQ L Sbjct: 116 K--TNQLRRFQLAEQLASLIDEYMVYRHDWLQSWIQGKAFTQFNQGLEKELKHEAWQIAL 173 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQ 228 W+ L E Q A L + + LP R+ I GI+ +PPV++ + Sbjct: 174 WQKLCESAQNSFQ-----AALQNFLLA--DDIQPEVLELPPRIAIFGITNMPPVFVNFFE 226 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 L + ++ L NPC+ YWGDI+ + A Q + R R EN Sbjct: 227 KLSQLTQVTLYHFNPCQEYWGDIRMERFSA--FPLQGKDDLGLRGPIFSRTFENEIPDLP 284 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR 348 + +G LGRD++ LL + S L+ + LLH IQ+ ILE++ Sbjct: 285 HSLLKSLG--------LLGRDFLNLLIENTSFDTLEHYAPSESSQLLHRIQNGILEMQED 336 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 + D S+ CHSP+RE+E LHD L+ L ++P L P+DI Sbjct: 337 FEDDLV---------------TDDSVKISSCHSPRRELEALHDYLVGSLADNPDLRPQDI 381 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 IVM +I Y+P I+ +F + P + L ++I+D+ R P++ +++ + L SR S Sbjct: 382 IVMAPNIHDYAPHIRNIFSN-PDNMPLDFSITDQELRGR-PLVNSYLKIFELAKSRLSSN 439 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 D+L + + P +R+ + + + +R W+ ++ IRWG D + ELP Q++W+FG Sbjct: 440 DLLEIFENPDFLSRYKLKVDDVHTIRDWIEQARIRWGKDAQQRADWELPEFEQNSWKFGF 499 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL-AQERPLEEW 587 R+L GYA + + S+L G ++G + + QL + +E+ L+ W Sbjct: 500 DRLLAGYAFDD-PELYDSILSCPI--GGDGAILGKIKTAADQLFSIYEIITQEEKSLQNW 556 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 +L + F +A+ + +I Q Q + Q + + + L L++ Sbjct: 557 CEYFSFVLKSNFEENADNQNEYNIILTQLQKMSERADLLQMNEVIAAEIAIKSLNSALEE 616 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + S F++ + C+L+PMRSIP KV+C+LG+N+G PR GFDLM++ ++GDR+ Sbjct: 617 QSSSHGFISRGITFCSLLPMRSIPVKVICMLGLNEGQLPRTNHRSGFDLMNKNWRQGDRT 676 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 DDRYLFLE+L+SA++KLY+SY+G+S +DN E PSV++ E ++YI + Sbjct: 677 MSLDDRYLFLESLVSAREKLYLSYVGQSERDNEEIPPSVILAEFMEYIKKI--------- 727 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPG--ERQSYAREWLPAASQAGKAHSEFVQ--- 822 H F+P+ +Q + S ++ AA K+ + Sbjct: 728 --------APDFQITQHALNAFNPRYFQDEDNDLASLSQLHFRAAQSLLKSREPEREVPA 779 Query: 823 ---PLPFTLPETV---------PLETLQRFWAHPVRAFFQMRLQVNF-RTEDSEIPDTEP 869 LPE + LE L +F+A+ + F + +L + + + SE+P+TE Sbjct: 780 LFCEQELDLPEEIKSQDGFIDLDLEDLAKFFANSAKTFLRCQLGTSLWKDQVSELPETEA 839 Query: 870 FI-LEGLSRYQINQQLLNALVEQD---DAERLFRRFR----AAGDLPYGAFGEIFWETQC 921 F + L +++I L+ AL+ +D D E + + A G LPYG G +E Sbjct: 840 FAQVNALEQFKIKSTLIEALIHKDPDLDEESFKIQMQELVLADGSLPYGLKGIECFEQIY 899 Query: 922 QEMQQLADRVIACRQPGQSMEIDLAC-----NGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 + +++A++++ + + +++ +++ L + LL + P Sbjct: 900 GDSEKVAEQILLHKGEHKEEQLNFTLTFELSEKIRLNCSLSGIYQQNLLTYHPGKDKFKH 959 Query: 977 GMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLL 1036 ++ +++L AS + ++ +D ++ + + A L Q++E Y G+ PL Sbjct: 960 LIKHCIKYLAL-ASVEPRKKLHYINQDKAYQIHEI--KDARQSLEQILELYLSGLKKPLA 1016 Query: 1037 VLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ 1096 LP + + + + + + A K+ AY+ + D +Q + + Sbjct: 1017 FLPNCFQKYYEQRKLKKP---KEHEVAMGLAEQKW--AYDSYNNAFADSVDNSFQVCFGK 1071 Query: 1097 LTPETMEAIV 1106 P + Sbjct: 1072 DFPYEDALLC 1081 >UniRef50_Q14GK3 Exodeoxyribonuclease V gamma chain n=16 Tax=Francisella RepID=Q14GK3_FRAT1 Length = 1079 Score = 727 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 281/1148 (24%), Positives = 513/1148 (44%), Gaps = 124/1148 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L Y SN+L+ L ++ +++ E+ D F P ++V S GM WL M L++ IA N+ Sbjct: 3 LYTYPSNKLEYLVQVLSKLLDVEKK-DLFTPTQLIVGSRGMQHWLNMQLAEYRNIAMNLK 61 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLERE--------------- 106 + + +I D+ + + + A+ K ++W++ LL + + Sbjct: 62 YDMINGYILDICYELTAKQEYKKAYTKDILAWRVFRLLSSQNQEKNTHSHAGGNLIADGL 121 Query: 107 ---------------DFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWET 151 + L+ Y D K +QLS K A+ F +Y+ YR +WL +WE Sbjct: 122 SSKDTSLCGYDNRDGWSSKLKEYYQDS--DLKKYQLSVKIAETFSKYISYRSEWLQKWEK 179 Query: 152 GHLVEG--LGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPS 209 + L + WQ +W+ LV+ + + ++ L+ + S Sbjct: 180 DEYINPSKLENDEDWQMLIWQNLVKDIAETPYK------VQLEALQKLDKQNLEKLNISS 233 Query: 210 RVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSF 269 ++I G++ + P L+ + L K+I +H+L+ NPC YW D+ A L Sbjct: 234 DIYIFGVNTISPKNLKFIFELAKYINVHILYINPCSEYWYDLHKSKISAWL--------- 284 Query: 270 EDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV 329 D + PLLA+ G+ G+++ L + E QEL+ F Sbjct: 285 --------------------DSDDYEIQPLLANLGQQGKEFFNQLLENEQQQELEVFEKF 324 Query: 330 TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVL 389 ++L +D N+ D + D SI+ + CHSP REV++L Sbjct: 325 DKESLAFEKLAD----NNQTQLVSLQRNLLELDCQNHTKQKDLSISINSCHSPLREVQIL 380 Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 HD+LL M++ DP + PRDI+VM +I+ YSP+I +VF P D+ LP +I+DR S P Sbjct: 381 HDKLLDMIKADPNIKPRDILVMCPNIEDYSPYIDSVFSRYPTDKKLPCSIADRTLLDSEP 440 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 + +FI LL LP+S F +L L VP + +F IT+E L +R W+ ES I + Sbjct: 441 LAASFIELLQLPESNFEVNKILDYLAVPAIQQKFKITDEQLEAIRYWLKESCIHHSNN-- 498 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL-PYDESSGLIAELVGHLASLL 568 +W +GL R++LG++ + L G +G L LL Sbjct: 499 ---------DQTFSWSWGLRRLMLGFSYSDSNYIIDDKLMTVPVIEGSEIAELGGLYELL 549 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 L + + L + R L W +M + F + + I+ + Sbjct: 550 ELLERYSQNLLKPRSLANWQVYLLEMFDDVFDVTNDEQYIAKKIKDIIAKTVTTAKNILL 609 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + L +R L +L + I+ FL G V C++ PMRS+PF+V+ +LG+N+G +PRQ Sbjct: 610 DQEIDLYTIRYCLISQLSEPIINNHFLNGKVTFCSMTPMRSVPFRVIAMLGLNNGKFPRQ 669 Query: 689 LAPLGFDLMSQKPK-RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 + + FDL+++ + +GDR++RDDDRYLFLEA++SA+ LYISYIGRS++ N E+ PS++ Sbjct: 670 ESAISFDLIARLGRKKGDRTKRDDDRYLFLEAILSARDYLYISYIGRSVKTNVEQQPSLI 729 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 ++EL Y+ ++ ++ + F + Y +S+ + WL Sbjct: 730 LKELTSYLNLNYDWGKED---------------IKEYPLHAFSSKCYS-DSYRSFDKAWL 773 Query: 808 PAASQAGKAHSE-FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 + + LP+ + + L + + P++A+ L++ + E+ D Sbjct: 774 KLLQSEPRGFYDSASLSNCANLPKNLSISKLVKVFDDPIKAYANYALELYLEDDFEELED 833 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 +EPF + L ++++ Q LL ++ D + + + +G LP +I + + + +Q+ Sbjct: 834 SEPFDINSLDKHKLKQALLKTFEDEKDKDLTIKTAKLSGKLPESVLTDIEIKEEVENIQK 893 Query: 927 LADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV 986 L D++ + ++ ++ ++ + ++ PS L++ + +L+L L+ Sbjct: 894 LLDKMSLASYESKYFHQEILGYELEANCYIK---NNQIMLSTPSSLNIGKKFELYLIALL 950 Query: 987 YCASGGNGESRLFLRKDG----EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESG 1042 S S ++ + E+R + A L I + + P L + Sbjct: 951 VAYSEQRDISAVYYGIEKNQVEEFRVENIEYTTAKGILEHYINQAEQIVVKPQL----AH 1006 Query: 1043 GAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRL---WRQLTP 1099 + + D++N+ D Q+A K +++ + N D+ +++ + + Sbjct: 1007 LSLAEAICDSKNNT----DKKKQQAWQKVIKSSQHNFKTL--EDNSYFKLFYNKFPTVDD 1060 Query: 1100 ETMEAIVE 1107 E I + Sbjct: 1061 FEGEKIYK 1068 >UniRef50_A1V2S0 Exodeoxyribonuclease V, gamma subunit n=90 Tax=cellular organisms RepID=A1V2S0_BURMS Length = 1354 Score = 721 bits (1862), Expect = 0.0, Method: Composition-based stats. Identities = 315/1176 (26%), Positives = 502/1176 (42%), Gaps = 124/1176 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIV-ERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML +++SNR + L + + P+ + ++V S + + L++ L+++ G+ AN Sbjct: 241 MLHLFYSNRHETLADALLDDLAFASDGAGPWAAQQVIVPSAALRRRLELDLAKRHGVCAN 300 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLERED-FTLLRHYLTDD 118 + F A ++W VL +P S F + W+ LL + Sbjct: 301 VRFSYLAQWLWAQIGEVL-TVPAHSPFAPDRLVWRCYRLLSDHGAAPWRASPRLAAYLAA 359 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLG-----------EAQAWQAP 167 +D +L+ + A +FD YL YRP+WLAQW+ G + L + +AWQA Sbjct: 360 ADAPMRHELAHRIATVFDHYLTYRPEWLAQWQDGESIFALEGAPRHGGEAARDDEAWQAA 419 Query: 168 LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQAL 227 LW+AL+ G P HR R + + P V + + +PP+++ L Sbjct: 420 LWRALLAELSDSGMPPAHRFLREARAFD-PDVIARARAKWPDAVSVFALPTMPPLHIALL 478 Query: 228 QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF 287 + L + I++ + NPCR +W DI A L R Sbjct: 479 RELSRWIDVRIYALNPCREFWFDIVTAARAESLDAADRL--------------------- 517 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDLES---SQELDAFVDVTPDNLLHNIQSDILE 344 Q+VG+PLLA WG+ + +++L +L + + + D L +Q+ IL+ Sbjct: 518 ---DYQEVGHPLLAEWGRQTQAQLHMLHELTESAAASDASRYADNPAPTWLARVQNAILD 574 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 L+ A G P + + HVCHS R++EVLHDRLLA + DP+L Sbjct: 575 LQPEAALGE--------------PPAERGVEVHVCHSLARQLEVLHDRLLAWFDADPSLA 620 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAP--ADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 P D++V + D+ + P I AVFG+ +PY I+ Q++PV + L+LP+ Sbjct: 621 PSDVLVAMPDLATAGPLIDAVFGTPAGADAARIPYRITGLPPSQANPVARVLLDWLALPE 680 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI--DDDNVRELELPATG 520 + +++ L +AAR+ I L ++ W+ SG R G+ D +PA Sbjct: 681 RDVGAPELVEWLRADAVAARYGIDATALETVQAWLAASGARRGLAPDAAEPPNPAVPAP- 739 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 +HT+ LTR+ LGYAM + LP + G AEL+G LA L+ + R +A+ Sbjct: 740 RHTFADALTRLFLGYAMPDGAAPVSTWLPIAGAEGGEAELLGRLARFTDDLDGFARRIAR 799 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 + + W V D L FF A++ + A++A G A+P +++R Sbjct: 800 DLTPQGWGDVFADALARFFDSGPAFADALSGVRDALDAMLAAMAEGAAGAALPAAVVRAG 859 Query: 641 LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 LA LD G V +L +R +P+++VCL+GM+DGV P FDLM+ Sbjct: 860 LAAALDD-PARGGVPWGGVTFSSLTSLRGLPYRIVCLIGMDDGVLPSLARADEFDLMAVF 918 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 K GDR RRDD+R LFL+ L++A+++L I+Y GRSI+DN+ P+ LV EL+D++ + Sbjct: 919 AKLGDRQRRDDERNLFLDLLLAARERLLIAYTGRSIRDNAPLPPAALVDELLDHLAAASA 978 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP-GERQSYAREWLPAAS-----QAG 814 P ++ + H PF + + P G +Y A Sbjct: 979 GPDAPP----DAVDAARRAFVIEHPLQPFSAEYFAPGGALFTYDASRATLARLLAEGARA 1034 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 +A F PLP + V +RFW HP R+ + RL + +E+ DTEPF L+ Sbjct: 1035 QARPFFAAPLPAEPEQPVAFADFERFWRHPARSLLRARLGIVLLDAQAELVDTEPFELDY 1094 Query: 875 LSRYQINQQLLNALVEQDDAERLFRRFR---AAGDLPYGAFGEIFWETQCQEMQQLADRV 931 + +++L L+E DA R A+ ++P GA G + + + QLA V Sbjct: 1095 AGSDALAERVLPLLIETADAAAFEHALRVADASPEVPGGATGAVRRDHALDALAQLAGNV 1154 Query: 932 IACRQ-PGQSMEIDLAC--------------------------NGVQITGWLPQVQPDGL 964 + +++ G L ++ G Sbjct: 1155 RRALADGATRVPFAFDVAPAWSAASDARWFGEHDAALAAAATREPLRLHGALARLTAAGQ 1214 Query: 965 LRWRPSLLSVAQGMQLWLEHLVYCASG-GNGESRLFLRKDGEWRFPPLAAEQALHYLSQL 1023 + +R + + WL HLVYCA G L+ + F P+AA L L+ L Sbjct: 1215 VIYRYARPGARDYLAAWLAHLVYCAIDPGGPRRTLWFGSGDTFEFAPVAA--PLEQLAPL 1272 Query: 1024 IEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRG 1083 +R G PL P S A + + KA ++ N V G Sbjct: 1273 AALFRAGRRMPLAFFPRSAWALVS--------------ESESKAAGVWI-----NDRVAG 1313 Query: 1084 EGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRF 1119 E DD WR P E + PL Sbjct: 1314 EADDASLALAWRGANPSLDEPFGALAHLVFDPLVEH 1349 >UniRef50_B5EPU5 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EPU5_ACIF5 Length = 1130 Score = 719 bits (1857), Expect = 0.0, Method: Composition-based stats. Identities = 343/1178 (29%), Positives = 525/1178 (44%), Gaps = 121/1178 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 V H +RL+ L + + L P E E+ LVQS G+A+WLQ TL+ GI A + Sbjct: 10 FIVLHGDRLEWLSDAVLEWLRAHPL-RPLEEEIFLVQSNGIAEWLQWTLAAHEGICAAVR 68 Query: 62 FPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYL---- 115 LP F+W+ + RVL + S +K ++W+LM LLP+LL DF LRH++ Sbjct: 69 VALPGRFLWESYARVLGTGIVSARSPLDKAPLTWRLMRLLPELLAHADFAPLRHFIGQSQ 128 Query: 116 TDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEAQAWQAP 167 D + +Q++++ ADLFDQY VYR DWLA W T + L Q WQ Sbjct: 129 RPDGALERRWQMAAQIADLFDQYQVYRGDWLADWTTDQSLLRRGDGERVTLPADQRWQPR 188 Query: 168 LWKALVEYTHQLGQPRWH-RANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQA 226 LW+AL + H G + RA ++++F+ L + LP RV I G + LP L A Sbjct: 189 LWQALRQDLHSRGLDQAPGRAQVHEQFLAALNAGRPPVTPLPRRVVIFGAATLPEQSLTA 248 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 L ALG+ +++ L NPCRY+W DI R + + Sbjct: 249 LAALGRQMQVILAVPNPCRYHWADIVSG-----------RELLRRERRRQPPRNGHDLSA 297 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ---------ELDAFVDVTPDNLLHN 337 ++ GNPLLA+WG+ GRD++ LL + + +D F + D LL Sbjct: 298 TATEDLHQFGNPLLAAWGRQGRDFLDLLDQFDETAALQRQMDIPRIDLFSEDQGDTLLRQ 357 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 +Q I +LE R + LD D S+ FH+ HS REV++LHD+LL Sbjct: 358 LQVQIRDLE-----------GIRPETCTALDDNDHSVVFHIAHSALREVQILHDQLLDRF 406 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD--RYLPYAISDRRARQSHPVLEAFI 455 L PRD+IVMV +I ++P I+A F + RY+PY I D +AR P+L A Sbjct: 407 ATGK-LQPRDVIVMVPEIGGFAPLIRATFDQYDREDRRYIPYHIVDLQARDEQPLLLALD 465 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 LL LP+ R ++ LL+ P L RF + E L ++ W+ +G RWG+ ++ L Sbjct: 466 WLLRLPEQRCRQSEIRDLLNCPALRRRFGLELEDLPIVQHWLAGAGWRWGLSAEHRAALG 525 Query: 516 LPAT-GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 +P Q++ F L R+ LGYA + + Y E GL A L+G L LL +L W Sbjct: 526 MPHCGSQNSGDFALQRLCLGYASGD-DSHFSGIEAYGEVGGLDAALLGPLGQLLEKLAHW 584 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM-TLIEQQWQAIIAEGLGAQYGDAVP 633 + L + E W R++L FF + + A+ +E+ + + A + +A+P Sbjct: 585 QHVLGESLVPEHWGEAARNLLTDFFSASDDDDEALLQNLEEALRQWQTDCAAADFNEALP 644 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L++ R + LD + + FL G V CTL+PMR++P+ +VCLLGMN+G YPR+ Sbjct: 645 LAVFRGAWLEMLDAPDLGRSFLGGGVTFCTLLPMRAVPYPLVCLLGMNEGDYPRRSPRPD 704 Query: 694 FDLMSQKP--KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 FDLM+ + GDRSRRDDDRYL LEAL++A+++LY+S+ GR ++N ER PS+LV +L Sbjct: 705 FDLMALPGMARPGDRSRRDDDRYLMLEALLAARRELYVSWAGRDQRNNHERAPSLLVAQL 764 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ-PGERQSYAREWLPAA 810 + I T H PF P +++AREW P+ Sbjct: 765 REAIRDGW--------------PPALEKRTFEHPLQPFSPDYLAGKPGLRTWAREWYPSP 810 Query: 811 SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 A + P P + + L F+ P RAF++ RL+ +F ED D EPF Sbjct: 811 HSAPE---NAALPDPAEITPR-SIRELLEFFRLPARAFYRQRLRTDFNEEDPAEEDDEPF 866 Query: 871 ILEGLSRYQINQQLLNALVEQDD--AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLA 928 L+ L Y + + LL A + R R +G P ++ + Sbjct: 867 TLDSLETYHLLEDLLRAAEKNGPDRIAERVRAQRRSGRYPLAGMASRTATALLDDVTPVL 926 Query: 929 DRVI----ACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ----- 979 Q + A + + WLP + + L ++ + Sbjct: 927 TVWREIGTEWTAAPQRRVVHRARGRILLEDWLPALYQNNAGDLAFVQLRASRLLNKDSKK 986 Query: 980 -------LWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMS 1032 + + G + + +D R P + L L++ ++EG+ Sbjct: 987 PEGDKLAALWLQQLLANAVGLRCGGIVVGRDVLVRAAPPPPGA-IAALDDLLDLWQEGLC 1045 Query: 1033 APLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGE-GDDIWYQ 1091 PL V ++ L+ A Y+GN + GE D+ Sbjct: 1046 EPLPVTLKTALVSLQGKNPA--------------------PIYDGNDRLPGEARKDLSLF 1085 Query: 1092 RLWRQLTPETMEA-------IVEQSQRFLLPLFRFNQS 1122 R + + E + P + ++ Sbjct: 1086 RDYPDFATLSSARTGPQRRGFAEYAAALYRPFAGWLET 1123 >UniRef50_C1ACJ2 Exodeoxyribonuclease V gamma subunit n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ACJ2_GEMAT Length = 1101 Score = 718 bits (1853), Expect = 0.0, Method: Composition-based stats. Identities = 307/1159 (26%), Positives = 502/1159 (43%), Gaps = 125/1159 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L+V + L A ++ + L PF+ ++++VQS GM +W++ L+++ G AA++ Sbjct: 6 LQVVTGDSPHALLAELDRTLTTWPLS-PFDDDIVVVQSLGMERWVRQQLARRRGCAASLQ 64 Query: 62 FPLPASFIWDMFVRVLP--------EIPKES-AFNKQSMSWKLMTLL--PQLLEREDFTL 110 P PA+F + + + P F +++++W+L LL +L + Sbjct: 65 LPFPAAFCRKLAESLAGIGGPGNETDAPTLDKRFEEEALTWRLFALLSDEDMLADAVYAP 124 Query: 111 LRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGH--------LVEGLGEAQ 162 LR +L +D K + L+ + + FD+Y +YRPD L WE G Sbjct: 125 LRAFLEQ-ADPAKRYGLARRVSARFDEYRLYRPDMLLAWEAGGHASVEGPFDTAAENPHA 183 Query: 163 AWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPV 222 AWQ LW+ +++ G+ H A + IE LE A P GLP R+ + GIS LPP+ Sbjct: 184 AWQCALWQQVLQ-----GERPMHFARWFLHTIERLEQAAIRPVGLPDRLSVFGISTLPPL 238 Query: 223 YLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSEN 282 +++ L+A+ + + P Sbjct: 239 FVRLLKAVSRFAAVRFFVLVP--------------------------------------- 259 Query: 283 AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDA-FVDVTPDNLLHNIQSD 341 + NPL A +G ++ + LL E D++LH++Q Sbjct: 260 ----ADPQLVGRSPNPLTAQFGHASQELLTLLGANEPGGSRHVQAAMPAEDSVLHHLQRA 315 Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 + + + P D S++ H+CHSP RE+EVL D+LL +P Sbjct: 316 LR-------------GSELTPTACLVSPTDRSVSVHICHSPLREMEVLRDQLLDAFAVNP 362 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSA--PADRYLPYAISDRRARQSHPVLEAFISLLS 459 L P D++VMV D++ Y+P + VFG A + +P+ ++DR + L+A LL Sbjct: 363 ALRPHDVLVMVPDVELYAPLAEVVFGGAMSESRPRIPFRVADRALARESAPLQALELLLQ 422 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV-RELELPA 518 L SR DVL LL VP + R +T + L WV ++GIRWG D D+ +P+ Sbjct: 423 LVSSRLGVSDVLHLLSVPSVRRRVGVTPAQVEQLTGWVQQAGIRWGWDADDRVSRFGVPS 482 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 +++WR GL R++ GYAM + +P AEL+G + L L Sbjct: 483 FVENSWRLGLDRLMAGYAMGPVDVLVEGHVPVAGDLVGDAELLGVFVRWVDDLERHLMRL 542 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAA-MTLIEQQWQAIIA----------EGLGAQ 627 + RPL W V ++ +P+ E A M I + QA+ Sbjct: 543 REARPLSTWSTVLAEVFAWAVVPEGSAEQATMAQIAEAMQALREPSGAPRQRRLREAHDV 602 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 V ++RD + LD + + FL G + IC + PMR+IP +V+ +LG++D YPR Sbjct: 603 EDPEVAFEVVRDWILAALDSDDHATGFLTGGLTICAMKPMRAIPHRVIAMLGLDDRSYPR 662 Query: 688 QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 + FDL+ + GDR R DDR L L+ L+ A+ +L++SY+GRS +N+E PS++ Sbjct: 663 RERRPAFDLIGSARRVGDRDPRTDDRQLVLDTLLCAEDRLHLSYVGRSETNNAEIAPSIV 722 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQS--YARE 805 V EL+ Y+ + + L H PF + P + ++ + Sbjct: 723 VAELLQYLQRMVHTVDKAPHPL----------LRVEHRLQPFSTAYFVPTATDTALFSFD 772 Query: 806 WLPAASQAGKAHSEFVQPL------PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRT 859 + AAS P P + L+ L W++P + + L ++ R Sbjct: 773 DVLAASVRDVTERRKAPPFVARAVTPLHTEGVIALDDLMLAWSNPSQLHAERTLHLSLRD 832 Query: 860 EDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET 919 + D EP +++ L R ++ Q+LLN ++ R A+G+LP G G + + Sbjct: 833 HRDALDDVEPTVVDALLRTRLQQRLLNEVLHGAGERGATARLSASGELPPGPLGAAWQQR 892 Query: 920 QCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ 979 Q++ L RV R + + +DL +G Q+ G L + R R + L ++ Sbjct: 893 LAQQVDPLLQRVGQPRF-LEPLTVDLRGHGWQLVGRLDYQHAEEQWRVRAATLKPRDVVR 951 Query: 980 LWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLP 1039 W+ HL A G G +R+ D E RF P A+ L L++GY+ ++ P+ Sbjct: 952 GWIAHLARQAMGVGGTTRVM-ALDQELRFAP--QADAMVLLEALVQGYQRMLAEPMPYFL 1008 Query: 1040 ESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTP 1099 + A+ K A L+ AR KF G G+ DD + LWR+ P Sbjct: 1009 AAAVAYRKAIATAS-SGRGAAKPPLEAARAKFAP---GGDYGEGDLDDPYVALLWRERDP 1064 Query: 1100 E--TMEAIVEQSQRFLLPL 1116 +A V F PL Sbjct: 1065 FAHHADAFVALVDAFWEPL 1083 >UniRef50_P96921 Exodeoxyribonuclease V gamma chain n=23 Tax=Mycobacterium RepID=EX5C_MYCTU Length = 1097 Score = 710 bits (1832), Expect = 0.0, Method: Composition-based stats. Identities = 292/1178 (24%), Positives = 485/1178 (41%), Gaps = 141/1178 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLS--------QK 53 L ++ + R D+ A + + DPF E++LV + G+ +WL LS + Sbjct: 3 LHLHRAERTDL-LADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGRA 61 Query: 54 FGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRH 113 G+ A I F P S I ++ + + ++ ++++W L+ ++ L+ L Sbjct: 62 DGVCAGIAFRNPQSLIAEITGTL-----DDDPWSPEALAWPLLAVIDASLDEPWCRTLAS 116 Query: 114 YLTDDSD--------KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQ 165 +L + + + + ++ + A LF Y RP LA W G + L AWQ Sbjct: 117 HLGHFATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDG-DLGELPGDLAWQ 175 Query: 166 APLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQ 225 PLW+ALV H + I L P LP+R+ + G + L +Q Sbjct: 176 PPLWRALVTTVGADPPHVRH-----DKTIARLRDG---PADLPARLSLFGHTRLACTDVQ 227 Query: 226 ALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQ 285 L AL H ++HL +P W R L F+ ++ Sbjct: 228 LLDALAVHHDLHLWLPHPSDELW-----------------------RALAGFQGADGLLP 264 Query: 286 LFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVT--PDNLLHNIQSDIL 343 + +PLL + G+ R+ L +++ D F+ T PD LL +Q+DI Sbjct: 265 RRQDTSRRAAQHPLLETLGRDVRELQRAL---PAARATDEFLGATTKPDTLLGWLQADIA 321 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 R R L D S+ H CH P R+++VL + LL +LE+DPTL Sbjct: 322 GNAPR-------------PAGRSLSDADRSVQVHACHGPARQIDVLREVLLGLLEDDPTL 368 Query: 404 TPRDIIVMVADIDSYSPFIQAVFG------SAPADRYLPYAISDRRARQSHPVLEAFISL 457 PRDI+VM DID+Y+P I A FG L ++DR Q++P+L L Sbjct: 369 QPRDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNPLLSVAAEL 428 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L++ ++R + +L L + A+F ++ L + WV ES IRWG D + R L Sbjct: 429 LTIAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPTHRRRYGLD 488 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSV-LPYDESSGLIAELVGHLASLLMQLNIWRR 576 +TWRFGL R+L G AM W LP D+ EL G LA + +L+ Sbjct: 489 TVVHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFVERLHHVVG 548 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 GL+ RPL WL ++ + + A +++++ ++A + + L Sbjct: 549 GLSGARPLVAWLDALATGIDLLTACNDGWQRA--QVQREFADVLARAGS-RAAPLLRLPD 605 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 +R L +L F G + +CT++PMRS+P +VVCL+G++DGV+PR P G D+ Sbjct: 606 VRALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHPDGDDV 665 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 ++++P G+R R +DR L L+A+ +A Q L I+Y G + R P+V + EL+D + Sbjct: 666 LAREPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAELLDALD 725 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER-----QSYAREWLPAAS 811 Q + A V+ + H PFD +N PG ++ L AA Sbjct: 726 Q-------------TTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQ 772 Query: 812 QAGK----AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 A + LP V L L F+ PV+ FF+ L + + D+ Sbjct: 773 AAAGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRA-LDYTLPWDVDTVEDS 831 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 P ++ L+ + + +++L ++ + G LP G G + + L Sbjct: 832 IPVQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDL 891 Query: 928 ADRVIACRQPG---QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 A +A R +++DL +G +++G + V + S L+ + W+ Sbjct: 892 AAAALAHRDGHGQAHDVDVDL-GDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGL 950 Query: 985 LVYCASGGNGE-SRLFLRKDGEWRFPP----LAAEQALHYLSQLIEGYREGMSAPLLVLP 1039 + A E S L + + + + L +L+ Y G PL + Sbjct: 951 VTLAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPL 1010 Query: 1040 ESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTP 1099 ++ AW + D Q+ + ++ N G+ D + R W P Sbjct: 1011 KTSCAWAQARRDGQDPYPP------------ARECWQTNRFRPGDDDAPAHVRAWGPRAP 1058 Query: 1100 E---------------TMEAIVEQSQRFLLPLFRFNQS 1122 + + R LPL S Sbjct: 1059 FEVLLGKPRAGEEVAGEETRLGALAARLWLPLLAAEGS 1096 >UniRef50_Q8D2T9 RecC protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D2T9_WIGBR Length = 1083 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 282/1125 (25%), Positives = 570/1125 (50%), Gaps = 49/1125 (4%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M+ +Y SN++D+++ ++ I++ +++P + E+I+ S+ +++WL++ ++ I AN+ Sbjct: 1 MIYIYQSNQIDLIQKILSKILKNFPINNPMKKEIIITSSSNISEWLKLNITLNINILANV 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +F SFIW + + +P ++ + +SW + Q++ + + + + + + Sbjct: 61 EFISLNSFIWKLVILTTKNVPFDNFAFRLMLSW----YIAQIIPKINKNIKIKNVYKNLN 116 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + ++F LS K ++L+++YL+++PDW+ + L ++Q +Q +W LV+ + Sbjct: 117 QFQIFYLSYKLSELYNKYLIFKPDWIDLLNFKKKSKKLEDSQYFQLIIWNLLVKKIKK-- 174 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 + + +++Y+ I+ +E + + R+FI GI +P +YL+ L+ L K I+IHL Sbjct: 175 EKDFCISSIYESCIQKIEKSNLIFEDIADRIFIFGIYYIPEIYLKILKTLSKKIDIHLFC 234 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NPC YW DI + Y++ L+ EN + + + + LL Sbjct: 235 INPCCLYWFDIDNRFYISNLI-------------------ENKIKNKKNFFRKKIKISLL 275 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 + WG LG Y+ LL++L + E F DNLLH IQ+DIL + + Sbjct: 276 SFWGCLGAKYLKLLNNLNENIENKIFYKPKKDNLLHTIQNDILYNKYYNIIISKKFNKFE 335 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 N R L+ D+SIT H C + E+ L++ ++ + +++ + +DI+VM ++I+ YS Sbjct: 336 KKNLRVLNSKDNSITIHTCKNKYEEINSLYNFIVKITKDNKKICFKDILVMASNIEDYSS 395 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +I ++F + + + Y ISD + + ++ A ++L LP +F E + LL+ ++ Sbjct: 396 YINSIFNN--INYKINYFISDIKIYERFNIISAIFNILKLPKFKFSIEQIFYLLEFSSIS 453 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 +F + E+ ++ L+ V G++WGI + ++ +++W + + + Y Sbjct: 454 NKFKMKEDEIKMLKYLVINLGVQWGISNKRFKKCNANFEEKYSWNNIIKKTVSEYYTRIN 513 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + + ++ + L + + +LN W L+Q L EW V + ++ FF Sbjct: 514 NKVYFKYIYSNDLDEKKINSLIKLENFISKLNYWYDYLSQPHLLYEWNDVIKKIIKNFFD 573 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 PD + + L+++ W II +G+ +Y + + L + L +R +E ++ ++ Sbjct: 574 PDKKENYVLDLLKKNWNDIIFQGINTKYKKTIYIETLENILYKRFKKENFFKKNKFNSIH 633 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 C L + IP K++CLLG+NDG YPRQ FD + + K D++ R +D Y FL L Sbjct: 634 FCNLKLSKIIPSKIICLLGINDGTYPRQDINYNFDSIYKNLKNDDKNIRQEDLYSFLIIL 693 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 +S+++ LYIS+I I + ++ S+++ ELI+YI S Y+ ++ N E+ +K L Sbjct: 694 LSSKEHLYISFIKNYINEERSKYISIIINELIEYISVSFYIKNCKSYNFLENINNIKKIL 753 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 + F ++ + + + +++ F + + + F Sbjct: 754 FKKYNNFYF----FRKEKIEIFNKKYFLNNININSDKKIFSK---------ISINEFFLF 800 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR 900 +++P++ + + +L++NF ++ D E + + Y+IN L L++ L ++ Sbjct: 801 YSNPIKFWCKKKLKINFS-KEHLYKDNEFILKNKFNSYRINIILFEYLIKNK---YLNKK 856 Query: 901 FRAAGDLPY---GAFGEIFWETQCQEMQQLADRVIA-CRQPGQSMEIDLACNGVQITGWL 956 + Y G F EI E + ++ +L + + ++ ++ + I GWL Sbjct: 857 DLLKNTIKYFFDGVFEEIIIEKKYYQIIKLINNINKHLLMKKETKKVFFKLDRTIIFGWL 916 Query: 957 PQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQA 1016 P +Q GLLRW P LS+ G W+EHL+YC GG G+S +FL + W F + ++A Sbjct: 917 PNLQNSGLLRWNPKNLSLQDGFLFWIEHLIYCIIGGKGDS-IFLGIESYWHFKNINYKKA 975 Query: 1017 LHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYE 1076 H+ +L+ GY G+ P+ +L +SGGAW+ ++ + + ++ D+ T + AR+K + A++ Sbjct: 976 KHFFKKLLVGYELGIENPIFLLNKSGGAWINHSFNKEKNKLILDEKTKKNARSKLISAWQ 1035 Query: 1077 GNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 GN + G+ D + ++ LT + I+ +S+++ + +FN+ Sbjct: 1036 GNKFINGDSQDFYISKVIPFLTENNINKIINESKKYFIFPLKFNK 1080 >UniRef50_C7PDT3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PDT3_CHIPD Length = 1063 Score = 706 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 294/1138 (25%), Positives = 489/1138 (42%), Gaps = 105/1138 (9%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L + SN L+ L + ++ FE +I+ Q+ GM WL++ L++ GIAAN Sbjct: 3 LYLRVSNSLENLSMGLAQTLKAS-NSQVFEQHLIVTQTEGMNNWLKLQLAEYLGIAANCR 61 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLT--DDS 119 F P I ++ L + + ++++W L LL + + RE + + Y + Sbjct: 62 FLKPNDLIHQIY--FLMDGQYSEMLSGRNLTWLLYKLLGEDIFRETYPAVATYYHTTEPD 119 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 K L+ + ADLFDQY +YRP+ + +W E WQ LW E Sbjct: 120 SDLKRMALAERTADLFDQYQIYRPEMINEW--NAPPEDPFAKIDWQQYLW---TEAKKVS 174 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSR---VFICGISALPPVYLQALQALGKHIEI 236 G + + Q ++ L++ L R V + G+S + ++Q L L I+I Sbjct: 175 GHALPDKTIIGQHILDMLKNPDHQET-LAHRMNTVHLFGLSIITAYHVQILHELSSFIDI 233 Query: 237 HLLFTNPCRY-YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 + NP YW D K A+ + R D Sbjct: 234 YFHIINPSPELYWFDDKSEKQQARWRLKGRPIHESDTA---------------------- 271 Query: 296 GNPLLASWGKLGRDYIYLLSDLE---SSQELDAFVDVTPDNLLHNIQSDILELENRAVAG 352 GNPLL WG++ +D L + ++ E + V+ PD LL+ +Q DI N Sbjct: 272 GNPLLMGWGRVVQDTFGLFFKYDAFINAYESEGLVEPQPDTLLNKVQHDIFLNAN----- 326 Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED-PTLTPRDIIVM 411 + P D D SIT + C++ REVEVL++ L+ ++++ TL+PRDI+VM Sbjct: 327 ------EQRHPIFPEDVEDGSITINNCYTVAREVEVLYNYLVHLVDKKRETLSPRDIVVM 380 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 V DID Y+P+I+A+F +AP Y I+D S + A ++L L + F +E+VL Sbjct: 381 VRDIDVYAPYIKAIFNNAPYKFR--YTIADESYADSDNLFNALHAILRLNEDNFKAEEVL 438 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 LLD + RF I + +R V+E+ IR+GI E L +W++G+ R+ Sbjct: 439 QLLDSSYVRKRFGINN--VPLIRHVVDEANIRFGIHGAKEDETYL-----VSWKYGIKRI 491 Query: 532 LLGYAMESAQGE---WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 + G M Q + P D G + V L +ER + W+ Sbjct: 492 MYGICMSGDQEYGKGEEGFFPLDILEGSDSLEVIRFCHFAEVLISAIEDRKKERSISGWV 551 Query: 589 PVCRDMLNAF-FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 +L+ + P+ E + + QQ L D V + Q L Sbjct: 552 EYIEGILHNMVYEPEEEIDEDYNTLMQQLSDY--NLLNEYMSDTVAFDVFSHSFLQTLTG 609 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + F+ G + C+L+PMRSIPF+VV +LG++ +PR+ P+GF+LM + +RGDR+ Sbjct: 610 TTRTGLFVNGGITFCSLIPMRSIPFRVVAMLGLDYDKFPRREQPIGFNLMEKNKQRGDRN 669 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 +D+D++LFLE ++SA+Q LYISY+G+S +DNS PS LV EL+DYI Sbjct: 670 VKDNDKHLFLETVLSARQYLYISYVGQSAKDNSRMPPSALVDELLDYIESGC-------- 721 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT 827 E V+ L F + Q ER Y+ + + + + + Sbjct: 722 ---EDAEGVRNRLVTRQPLQGFSRKYGQGDER-LYS---YLNTAVPERIITRADKAMEQP 774 Query: 828 LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNA 887 E + L+ L RF+ +P +A++ L + + E + +TE F L+ L ++ + +LL Sbjct: 775 SIEEIDLDELVRFFKNPFKAYYNKVLGIYYNDEQVLLNETEIFHLDSLQKWSLKNELLQ- 833 Query: 888 LVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC--RQPGQSMEIDL 945 ++ + + R G LP + + E+Q + ++ AC QS++++L Sbjct: 834 -MDTNAIANMKIRLVKTGRLPLKNMAYVALQQIEAEVQPVREKFRACINGAEEQSVQVNL 892 Query: 946 ACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGE 1005 G + G + V L++ S M+ ++ +L A+G Sbjct: 893 DIEGTLLKGTINGVFDGKLVQVSWSKREDKYLMEAYIRYLAGRAAGVLDGMCFISGASKR 952 Query: 1006 --WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDST 1063 + PLA ++AL L+ L++ +REG P+ D D S Sbjct: 953 EAFEAIPLAQQEALRRLTALVKIFREGFEKITPFYPD--------FDIKPADVAGLDFSK 1004 Query: 1064 LQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ---LTPETMEAIVEQSQRFLLPLFR 1118 K K L +G+ + D + R + ++ L+PL Sbjct: 1005 FSKKVDKALD--KGDDITI----DPYISREYENGFFKDETMLDTYKVICSHLLVPLAE 1056 >UniRef50_Q89AB4 Exodeoxyribonuclease V gamma chain n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=EX5C_BUCBP Length = 1111 Score = 703 bits (1814), Expect = 0.0, Method: Composition-based stats. Identities = 270/1123 (24%), Positives = 538/1123 (47%), Gaps = 25/1123 (2%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +Y S + ++ ++ E L +P E+ +V + QW+++ +++K+ + NI Sbjct: 1 MFTLYKSLKFNLFVKSAFKVILNEPLLNPLTKEIFIVNNKETEQWIKIFIAKKYKVCTNI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 F FI ++ + P++ +S F+K S+ WK++ + P + LL ++ ++ Sbjct: 61 KFFKLKHFILNILKQNTPKLYSKSEFSKYSIMWKIINI-PDIQH-----LLTKIVSKNNT 114 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 LF+++S ++LF YL YRPD++ +WE + Q WQ +W +++YT Sbjct: 115 YSTLFKIASSISNLFQLYLKYRPDYIKKWEQKSNIPKTRLKQKWQQIIWMRIIKYTKDAN 174 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 +P H +NL I+ ++ LP R+FI I+ + P Y L+++ K+ +H + Sbjct: 175 KPILHFSNLLYDSIKKMQRNNFINTKLPVRIFIFNITPITPQYAIFLKSISKYCSVHFFY 234 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 + D + + ++ + +L S+N +++ Sbjct: 235 ATAS---YND--KQMFSTSFIKFKQTQEISNNQLLSLLHSKNKNIIYHEIENFQKNTKFQ 289 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 + W + + L L + ++ + ++LL +Q+ IL L + + + Sbjct: 290 SYWITYEYEQM-LFLSLIKDKTINLNFKIKQNSLLQYLQNKILNLH-----SIQKKNNEQ 343 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 +NK + D S++ H CH+ RE+EVLH+ LL +L ++ + +D++V+ ++D+Y P Sbjct: 344 ENNKILILKTDKSLSIHSCHTLIREIEVLHNNLLNILNDNNDILFQDVLVISKNLDTYIP 403 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +I +F SA + ++P++I+ + ++ + + L+ LP+ + LL++P L Sbjct: 404 YINQIFNSASSKNFIPFSINYK-NIKNIEFYKTILELIDLPNIELNINKITNLLNIPTLL 462 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 + I E+ + L Q +N++ I+W D+ + L W GL R+ LG + + Sbjct: 463 KKVQINEQEIPILLQIINQTEIQWENDNILSNDW-LSNDITKCWEHGLQRIFLGQIINNI 521 Query: 541 Q-GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 W++++PY+E S L + L SL+ LN W++ L++ + L W + +LN FF Sbjct: 522 DYKFWENIVPYNEFSTLYYNIFNKLISLISLLNKWKKILSKPKFLSHWDITFKKLLNDFF 581 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 + + LI ++W II G+ +Y + ++LL++EL + S +G + Sbjct: 582 TDHEQKQPEAKLIIKKWTEIIHSGMQEKYTKKISITLLKNELCNSVSYISQSNYLFSGKI 641 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG-FDLMSQKPKRGDRSRRDDDRYLFLE 718 C + +IPFK++ L+G+ND + ++L+ P+ D + + L L+ Sbjct: 642 TFCNNFTLTNIPFKIIYLIGLNDNISSNTHESFDIYNLLKLHPRAYDPCDEINHKNLLLK 701 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 L+SA++ YIS+ S + + ++I YI Q Y+ N +++ +K+ Sbjct: 702 TLLSAKKFFYISHQIVSNNYKKLNNIPIAIDKIIKYITQYFYIKNKNKDNFNDNLKDIKS 761 Query: 779 HLTCLHTRMPFDPQNY-QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETL 837 H+ +T + +N+ + ++ A+ +H EF++ LP +T+ TL Sbjct: 762 HIYHNYTFYAHEKRNFLEKLNYPNFNTTIWKMATLINNSHKEFIKKLPSIKNQTINYNTL 821 Query: 838 QRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL 897 FW +P++ FF +RL + T ++ + L +Y++N+ LL + + + +L Sbjct: 822 ILFWKNPIQTFFHVRLNIQLNTTKNKHMHQNKHFINKLDQYKMNKTLLKFFLYKQNTNQL 881 Query: 898 FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC-NGVQITGWL 956 F+ ++ G +P G I WE + + L D+++ ++ + + + N + G L Sbjct: 882 FQYYKNIGIIPNNNIGNIIWEYTKKLITPLYDQIMKIKKILNNSKFCINVKNKCMLHGQL 941 Query: 957 PQV-QPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQ 1015 + GLLRW+ + LS + WLEHL+YC+ S L F L + Sbjct: 942 KNINSSGGLLRWKATKLSFQDIISCWLEHLLYCSLYKKHNSILIGTNHQIITFYKLENKT 1001 Query: 1016 ALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAY 1075 A +YL + I GY +GM P+ +L +SG W+ YD +N+ + + A FL + Sbjct: 1002 AKYYLKKYISGYFDGMEQPI-LLTKSGINWINAIYDKKNNKFYTNTNKNLNAYKIFLNTW 1060 Query: 1076 EGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 GN + GE DD + Q++ LT + ++ I + ++++L P+ + Sbjct: 1061 NGNNWITGEKDDPYIQKMIVYLTKKNIQKIYKTTKKWLTPILK 1103 >UniRef50_UPI0001C32181 exodeoxyribonuclease V, gamma subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32181 Length = 1143 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 311/1204 (25%), Positives = 482/1204 (40%), Gaps = 148/1204 (12%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG----- 55 ML V+H++ D L A + ++ RL DPF E++ V + G+ +WL LS + G Sbjct: 1 MLHVHHADGADRLVAALAEVL-TVRLADPFAAEVVAVPTRGVERWLAQRLSGRLGTSPGA 59 Query: 56 ---IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLR 112 I AN+ FP P + + + + W L+ L+ + L Sbjct: 60 GDGICANVAFPTPRRVVEEAIAAASGLDAATDPWRPERALWPLLELVDAASDEAWLGRLT 119 Query: 113 HYLTDDS-DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEG----LGEAQAWQAP 167 +L + D+ + A LF +Y ++RP L W G +G L WQA Sbjct: 120 AHLDRAAGDRSRRLSAVRHVATLFARYALHRPAMLRAWAAGSDEDGAGGALDAEHRWQAE 179 Query: 168 LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQAL 227 LW+ L E G A L L LP R+ + G+++LP LQ L Sbjct: 180 LWRRLRERVGVPG-----PAELLDLGRARLVE-DPGLSDLPERISLFGLTSLPARDLQLL 233 Query: 228 QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF 287 +AL + ++HL P W I D A +LTR + S Sbjct: 234 RALAERRDVHLFLLMPSPAAWRGIADAAGRGPILTRGQALSAA----------------- 276 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDL--ESSQELDAFVDVTPDNLLHNIQSDILEL 345 +PLLASWG+ GR+ LL L E+ PD LL +Q+DI Sbjct: 277 ------LPAHPLLASWGRDGRELQLLLEPLPTEAVHADAIGAGDEPDTLLARVQADIRAD 330 Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 R D L D+S+ HVCH R+VEVL D +L L +DP+L P Sbjct: 331 RTP-----------REDEPVQLGDGDASVQVHVCHGRARQVEVLRDAILHALADDPSLEP 379 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRY-----------------LPYAISDRRARQSH 448 RD+IVM DI++++P ++A FG+ AD L ++DR RQ++ Sbjct: 380 RDVIVMCPDIETFAPLVEATFGAGEADVGEALADDAVDLSGAHPAELRVRLADRSLRQTN 439 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 PVL LL L +R + ++L L+D + RF + E+ L + WV SGIRWG+D Sbjct: 440 PVLGVVTKLLELATARVTASELLDLVDREPVRRRFRLEEDELARVEDWVAASGIRWGLDA 499 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQG-EWQSVLPYDESSGLIAELVGHLASL 567 + L Q TW GL R+L G AM G VLP D+ +L G A L Sbjct: 500 AHRAPFRLQHVPQGTWAAGLDRLLTGVAMAERPGHTLAGVLPLDDVDSSAIDLAGRFAEL 559 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 L +L LA +P+ W + + ++Q ++ E Sbjct: 560 LDRLAAALDELAAPKPISAWATAIAEAADTMTATTPRDAWQRAELQQLLADVVEEATNDG 619 Query: 628 YGDAVPLSL--LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 AV L + + L RL F G + +CTL PMRS+P +V+CLLG++D V+ Sbjct: 620 VASAVSLDVADVAALLGGRLAGRPTRTNFRTGHLTVCTLQPMRSVPHRVICLLGLDDDVF 679 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 PR+ G D++ +P GDR R +DR + L+AL++A +L ++Y GRS + N+ER P+ Sbjct: 680 PRRSPRDGDDVLLDEPWIGDRDGRSEDRQILLDALMAAGDRLIVTYSGRSERTNAERAPA 739 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER-----Q 800 V + EL+D I ++ C R + + H PFD N+ P Sbjct: 740 VPIGELLDVIDRT---------ACAADGGRARDAVLVRHPLQPFDAANFAPSTLVPQRAW 790 Query: 801 SYAREWLPAASQAGKAH----SEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN 856 S+ L A G +PL + + L+ L F HPVRAF + RL V Sbjct: 791 SFDGVTLEGARALGGERGSRPPFLPRPLQPQDADVIELDQLLAFVGHPVRAFLRQRLGVG 850 Query: 857 FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 E D+ P L+ L+R+ + +LL A D RA G +P GA G+ Sbjct: 851 VDVGAGERSDSLPIELDPLARWGLGARLLAARRAGVDVGVAVADERARGSVPPGALGDQV 910 Query: 917 WETQCQEMQQLADRVIA---CRQPGQSMEIDLAC-NGVQITGWLPQVQPDGLLRWRPSLL 972 E++ + P +++++ +A +G + G + V L S + Sbjct: 911 LRGVVAEVEAILGAAAETVGAGGPLRTLDVRIALEDGRTLAGTIGGVGQYVLPVVTYSRV 970 Query: 973 SVAQGMQLWLEHLVYCASGGN---------------GESRLFLRKDGEWRFPPLAAEQAL 1017 + M+ W+ L A+ + R P + +A Sbjct: 971 DPRRRMESWVRLLALTAAFPERSLVATTVGRARRDVDRATTIARIAQPGGEPDVRRTRAH 1030 Query: 1018 HYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEG 1077 L+++++ Y GM PL + ++ + A + A+E Sbjct: 1031 AELARIVDLYDRGMREPLPLFRQTS---------------AAYAAGGATAVARAHTAWET 1075 Query: 1078 NMMVRGEGDDIWYQRLWRQLTPE--------------------TMEAIVEQSQRFLLPLF 1117 + E D +Q ++ P ++R L Sbjct: 1076 DFQPLREDLDPEHQLVFGGTLPFERLLAEAPRDDEQGEDWDMSEPSRFGRYARRLWSGLL 1135 Query: 1118 RFNQ 1121 + Sbjct: 1136 AHEE 1139 >UniRef50_UPI0000E0F593 exodeoxyribonuclease V, gamma subunit n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0F593 Length = 1147 Score = 692 bits (1785), Expect = 0.0, Method: Composition-based stats. Identities = 286/1183 (24%), Positives = 502/1183 (42%), Gaps = 119/1183 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVE---RERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIA 57 M V SN+ ++L ++ ++ ++ + FEP I+V+S GM +L M +++K G++ Sbjct: 1 MFHVVPSNKQEILTQVLISFIQDDYQQGIRGVFEPTTIVVESQGMQHYLNMEIAKKTGLS 60 Query: 58 ANIDFPLPASFIWDMFVRVLPE-IPKESAFNKQSMSWKLMTLL--PQLLEREDFTLLRHY 114 NIDFPL + I+ + +L + +P++S F ++ + W + T+L P + Y Sbjct: 61 MNIDFPLVSREIYSICRSILGDKVPQDSPFKREYLVWNIFTILQDPGFISDPRAAYANAY 120 Query: 115 LTDDSDKR-KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALV 173 + + + F+L+ + AD+++QYL+YR DWL WE G+L + WQ +W+ LV Sbjct: 121 WQEQPEPLLQCFRLAKQLADVYEQYLIYREDWLTAWEQGNLKGLNDTLEPWQQLIWEQLV 180 Query: 174 EYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKH 233 H A L I L + LP + I ++ L P ++ A+ ++ Sbjct: 181 A------IHPDHPAALRAAAISQLAT---HQAKLPKSITIFAVNTLSPTQIEFFSAVAQY 231 Query: 234 IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ 293 I+++L F NPC YWGD+ L + E + + + Sbjct: 232 IDVYLFFLNPCSQYWGDVVSDKVLLR---------------------ERLSKGIDELKAE 270 Query: 294 DVGNPLLASWGKLGRDYIYLLSDLESSQELD--AFVDVTPD---NLLHNIQSDILELENR 348 D+ +P+LA+ G+ GR L D+ D F+ T D +LL +Q+DI Sbjct: 271 DISHPILANLGQQGRGLFNQLQDINYPDMTDSQLFIAPTADDAPSLLKQVQADI------ 324 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 + + +D+SI H S REV+ LHD LL +L DP L P DI Sbjct: 325 -------ASAHVTPVTLHPEDIDASIQIHSGFSAIREVQTLHDELLRILTADPDLQPHDI 377 Query: 409 IVMVADIDSYSPFIQAVF-----GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 +VM ++ Y+PF+ ++F + L +I+DR S P + F+ +LSLPDS Sbjct: 378 LVMCPSVEEYAPFVNSIFRPSYKPAQTDSPQLVCSIADRAPLNSEPTVMMFLDMLSLPDS 437 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA--TGQ 521 RF ++ L +P + ++TE+ L W++ S I+WG++ + T Sbjct: 438 RFSVTKIIDYLRIPSVQKNLNLTEDELTLCINWLSMSQIKWGLNQAHKASWLDNEAVTEH 497 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 +TW +GL+R+ LG Q D GL + ++G L L+ +L+ +R L + Sbjct: 498 YTWEWGLSRLALGCLHSEMQEHHDEFAYVDAVEGLNSRILGKLLVLVNRLSTFRAQLNGD 557 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + ++EW + ++M + F + A +IEQ + A Y + L+L+R+ L Sbjct: 558 KSIQEWERLLQEMSQSLFGETSTQLRAQQMIEQTISQFSKQVQTAGYESPIGLALVRESL 617 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 + + +FL G V +++PMRS+PFK++C+LG+NDG +PR P DL++Q Sbjct: 618 SDKFSTPDALNQFLTGQVTFSSMVPMRSVPFKMICILGLNDGAFPRIALPNSIDLIAQSE 677 Query: 702 K-RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 K RGDRSRR++DRYLFLEALISA+ LY+SY G+S +DN PS+++QEL+ Y+ Q Sbjct: 678 KQRGDRSRRNEDRYLFLEALISARDYLYLSYQGQSAKDNQTIEPSLVIQELLHYLDQKFI 737 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP-----GERQSYAREWLPAASQAGK 815 L + +E + + PF P + ++ S+ + WL A Sbjct: 738 LADPQ----NEKPEKFSERIVRRAPLQPFSPTLFASNEHDFEQKGSFDQGWLALAKSGVL 793 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 +P + + + + +P++ + V + + D EPF L+GL Sbjct: 794 PAKTSTITVPDDI--YLDHNDMTALFINPLKLHVNKQYDVVLDEYINVMDDVEPFSLDGL 851 Query: 876 SRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR 935 S+ ++ Q LN D + P G++ + L D + Sbjct: 852 SKDKLLVQALNTASATIDYDNANDM-GLDFVKPLVNTGDVSQWMLKSQQMSLYDGLHRTI 910 Query: 936 QP-----------------GQSMEIDLAC-------NGVQITGWLPQVQPDGLLRWRPSL 971 Q + +L +V L Sbjct: 911 AESLAQQPVTTARHNQVVKWQFEHFQFHVNALFAIDDEYHSHTFLHKVMTKSRLF----E 966 Query: 972 LSVAQGMQLWLEHLVYCASGGNGESRL------------FLRKDGEWRFP--PLAAEQAL 1017 L ++ M L+ + + +G L + P + EQA Sbjct: 967 LKLSLLMTHCLKLMCFGTTGDTSIRYLNSRERTTAGQKSVCLEVNTLHIPYDFMTPEQAD 1026 Query: 1018 HYLSQLIEGYREGMSAP--LLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAY 1075 L Y + + P + + ++ YD + ++ + + Sbjct: 1027 IVLKLFSAQYIQALREPHFIHLDVYQNLESIRRQYDKDVVSNFKQIPHIEYLLDDYGEQR 1086 Query: 1076 EGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 E + + + L+ A+ + + P+ + Sbjct: 1087 EDKFSSYAWNVNTYCKWLFPHGFSHQDIALTNIDEWYFHPIIQ 1129 >UniRef50_A9BB00 Possible exodeoxyribonuclease V subunit C 125 kD polypeptide n=1 Tax=Prochlorococcus marinus str. MIT 9211 RepID=A9BB00_PROM4 Length = 1105 Score = 684 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 233/1166 (19%), Positives = 446/1166 (38%), Gaps = 115/1166 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +Y SNR + L ++ + E I+V + +WL +++ GI+A + Sbjct: 1 MLTIYRSNRAEWLANVLAEQLRANPP-GLSENVEIVVNTWPTGRWLGEEIAKINGISALV 59 Query: 61 DFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 FP PA+ + + + L I + + + W ++ LP+LL++E+ +L+ +L D Sbjct: 60 RFPFPAAQLKTLVRKFLGIEVINDDDPWEANQLIWPILNSLPELLQKEEAGVLQKWLERD 119 Query: 119 SDK-----RKLFQLSSKAADLFDQYLVYRPDWLAQW-----ETGHLVEGLGEAQAWQAPL 168 + R +QL+ A FD+Y++YRPD ++ W E +L L + WQ L Sbjct: 120 LSQSGKLSRDEWQLAKTIAYTFDEYIMYRPDVISDWWGTENEINNLKSKLPKYIQWQPIL 179 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQ 228 L + Q + L+ LPS + I GI++L PV L+ +Q Sbjct: 180 INLLKQRITQ-----EPFGLQVRNVASKLKKGIAPKQNLPSDLRIFGINSLAPVQLELIQ 234 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 AL +E+ + PC+ W K + ++ N Sbjct: 235 ALSCIMEVKVFLLTPCKDLWSRCKTKRE----------------------EYGEGWKVAN 272 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLS-----DLESSQELDAFVDVTPDNLLHNIQSDIL 343 L A+ G++G ++ LL L E D F L + +L Sbjct: 273 DKLWLLNKQRLEATLGRMGSEFEQLLEGSGEYQLGEWDEKDLFAMPATIALNKQRKPTLL 332 Query: 344 E-LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 E ++ R V IE RS DSSI+F C P+R+++++ D++L L + Sbjct: 333 EQIQQRLVTNECIEPLQRSL-------DDSSISFTECPGPKRQIQIVRDQILQQLALNKN 385 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRY-LPYAISDRRARQSHPVLEAFISLLSLP 461 L P+DI++M ++ ++ I ++F A LP+ I+DR + + I L+ + Sbjct: 386 LEPKDILIMTPQVEKFAHLIPSIFNDVSATGVTLPWKITDRSQYDQPGLTQCIILLMEIA 445 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 +R + ++ LL PV+ + + + + + + E+G RWGI+ Sbjct: 446 CTRLTASNLDQLLTNPVIKDLYKLDDSEIDKITNCLQETGFRWGINSLER-----DGEET 500 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQS-VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 HT + L R L+G + + G + P+ + G+ + +L ++ +GL Q Sbjct: 501 HTLNWCLERWLVGMVIPTIPGLVLGGIAPFSK--GISISELSKWWEILSKICNMLQGLRQ 558 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 +W V + + + D + + I + + + ++ + Sbjct: 559 SHSCMKWGLVLKGLCDDLCNNDRKWSWERQRFLRAIDDWIRAADC--FKKEIKIEVVAEI 616 Query: 641 LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 + + +E G + I L PMR+IP K++ L+G+++ ++PR+ GF L+ K Sbjct: 617 VKDLIAKEAGRFGHRTGRITISALEPMRAIPHKMIVLMGLDETIFPRKQQRPGFSLLDHK 676 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 GD D DRY+ LEALIS ++ L I++ GR + PS VQ+ +Y+ Sbjct: 677 HFLGDPRINDKDRYVLLEALISTRETLLITWDGRDEKTGDSLEPSSPVQQFFEYLQHELG 736 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF 820 L S + + P +R R+W+ A + Sbjct: 737 EKSSMGLLKKPSPNPLNKNNFLSCNNQP----PISCDKRDLETRQWMNAKQGSRGLTLAL 792 Query: 821 VQPLPFTLPETVPLET---LQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR 877 + L+ + A P + + ++ R + I D + + L + Sbjct: 793 PLNWNLSKNAVNSSSDNELLKSWLATPQLKWLEQ-FHLHPREWNKPIEDLDSLSIPELIK 851 Query: 878 YQI------------NQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 ++I N Q+++ + + ++ ++ G P + + E + Sbjct: 852 FKILKQEFTELITSSNNQIISPEINERESPNWQDKYLGQGVFPPKSAATLESEILGRRWT 911 Query: 926 QLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL 985 L + + + ++ G + + + + L + WL HL Sbjct: 912 SLIKSLSKLGEVKRDSLMEDNETGEIL------IANNCTVLVEIGRLKAKTILNTWLTHL 965 Query: 986 VYCASGGNGESRLFLRK----------DGEWRFPPLAAEQALHYLSQLIEGYREGMSAPL 1035 A + + + + + + + P+++ +A L +L + G+ Sbjct: 966 KLSAYHKSTKKTVVIARSDSNTKIDSYEVMLSWHPMSSIKAESILDELKQQAHNGLKQCW 1025 Query: 1036 LVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR 1095 V PESG K Y ND F +A+ G+ GE + Q + Sbjct: 1026 PVPPESGWKLAKARYKKSNDCNEI-----------FRRAWIGDFNKEGERNKPEMQLCFG 1074 Query: 1096 QLTPETM----EAIVEQSQRFLLPLF 1117 + E + + PL Sbjct: 1075 YKAAPEIFLENELFDQCLELLYKPLI 1100 >UniRef50_D2U882 Probable exodeoxyribonuclease v, gamma chain protein n=1 Tax=Xanthomonas albilineans RepID=D2U882_XANAL Length = 1187 Score = 684 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 320/1171 (27%), Positives = 499/1171 (42%), Gaps = 124/1171 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPF-EPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 R+Y SN LD L AL+ + R + P PE++L+ M +WLQ TL+ G+AAN+ Sbjct: 60 FRLYPSNALDTLAALLAEELRRPLPEQPLLAPEVVLIPQVAMRRWLQSTLAATHGVAANL 119 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLP-QLLEREDFTLLRHYLTDDS 119 F P F+ R L + + S+ W+L L L L YL DD Sbjct: 120 QFLTPGEFVAHALERNLG--AADDDLDMTSLHWRLYAALRSDLGADPTLAPLAAYLADD- 176 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 D K + L+ + ++F++Y +R DWL +WE G + + QA LW+ + Sbjct: 177 DPLKPWTLAGELGNVFEKYQAWRRDWLLRWEAGADPDDV------QARLWRRIA------ 224 Query: 180 GQPRWHRANLYQRFIETLESAT-TCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 R +RA +++ P GLP R+F + + P L+ L + +H Sbjct: 225 -SGRAYRARRIGHYLDRYARPDGPLPQGLPPRLFAFAVLNISPDVLRVLATQARVGTLHF 283 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 P + YWGD++ + AG + EQ NP Sbjct: 284 YLPTPTQGYWGDLQTLWQRRR-----------------------AGTAVDLFAEQIQENP 320 Query: 299 LLASWGKLGRDYIYLLSDLESSQ---ELDAFVDVTP------------DNLLHNIQSDIL 343 LL +WG GRD++ L+ D E E+ + D D+LL +QSD+ Sbjct: 321 LLQAWGAAGRDFMALIGDYEVVHPLAEIAVYADPLESGQRPLADGGLGDSLLRRMQSDLF 380 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE---D 400 + +D D S+ H CH+ RE++VLHD+L A+L++ D Sbjct: 381 QRRAPRSPAAL----------PTVDKHDPSLQVHACHTRLRELQVLHDQLRALLDDPRLD 430 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 P L PR+I V+ +ID Y P++ AVFGS D LPYA++D S P+ E F++LL L Sbjct: 431 PPLQPREIAVLSPNIDPYVPYLDAVFGSHGNDDALPYALADASPLASEPLAEVFLALLGL 490 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 P +RF ++L L+ +A + GL LR W++ +G RWG+D + R+ + PA Sbjct: 491 PIARFGLHEILDLIASAPIAEAAGLDTAGLDRLRGWLHAAGARWGLDAAHRRQHQAPADD 550 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 +TWRF L R+LLG+A + V P+ + G + L LL L+ + LA+ Sbjct: 551 AYTWRFALDRLLLGHASGAEDDI-DGVAPWPQLEGSALAALDTLLRLLRVLDRHQAALAE 609 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAE---TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 P +W +L+A + A+ + + A+Y AVP ++ Sbjct: 610 PMPPAQWRECLLALLDALLPQTPSAPRAQRALERLRTLIDQFARDAARAEYTAAVPAEVV 669 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD-- 695 R L + L G ++ ++PMR +PF+ +CLLGMNDG +PR+ G + Sbjct: 670 RAHFTAVLGESDTRAPLLTGGISFGRMVPMRLLPFRAICLLGMNDGDFPRRDPAAGLNRL 729 Query: 696 ---LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 L + + + GDRS R+DDR+LFL+ SAQ Y+SY+G +D S R PS LV EL+ Sbjct: 730 TAELGTARRRHGDRSTREDDRFLFLQLFASAQDVFYLSYLGADARDGSVREPSPLVGELL 789 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP-------FDPQNYQPGERQSYARE 805 Q H P L H P R SY R+ Sbjct: 790 ACAAQYHAEPAAATT------------LVVRHPLQPFAAAAFGAIGAEAADPRRFSYRRQ 837 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPE--------TVPLETLQRFWAHPVRAFFQMRLQVNF 857 W PA +P TLP ++ ++ L+RF P F + RL + Sbjct: 838 WRPAVDSLIGQRQPLPPWIPETLPAMADDALPTSLSIDELRRFLLDPAEQFLRQRLGLRL 897 Query: 858 RTEDSEIPDTEPFI--LEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEI 915 D EP + GL +Y + QQ+ AL+ + + + L+ R RA LP G G Sbjct: 898 PDPAQADSDLEPLVAPTRGLDKYGLQQQVFEALLRE-ETDGLYERLRARALLPSGPLGRH 956 Query: 916 FWETQCQEMQQLAD---RVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLL 972 + ++++ AD + + + +G ++ G L G+ R + L Sbjct: 957 QLDQHLRQLRPYADAFGHWCGATPAPPAARLHVHIDGTELHGRLSDWYAAGVGRVKIGAL 1016 Query: 973 SVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAE-----QALHYLSQLIEGY 1027 S ++ LE L+ A+G F + PL E QA L+ L+ Y Sbjct: 1017 SGRSAIRHGLEWLLLRAAGEGAPFVRFFEHEDGLGPHPLDPERLSSTQAQQALTDLLRLY 1076 Query: 1028 REGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDD 1087 R+G PL +P S A+ + D + + + +A + +A + + G D Sbjct: 1077 RQGQQTPLAFVPYSSWAYYQAARGGDLDKAIKNAAAQWQAGFSWREADRPQLRLVCRGRD 1136 Query: 1088 IWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 + P+ A SQ L R Sbjct: 1137 PF-------ADPQRFAAFASTSQHIFGLLER 1160 >UniRef50_Q3BM39 Exodeoxyribonuclease V, gamma chain n=19 Tax=Xanthomonadaceae RepID=Q3BM39_XANC5 Length = 1184 Score = 680 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 327/1172 (27%), Positives = 513/1172 (43%), Gaps = 125/1172 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPF-EPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 R+Y SN LD L AL+ + R P +PE++L+ M +WLQ TL+ + G+AAN+ Sbjct: 56 FRLYPSNALDTLAALLAQELRRPMPGQPLLQPEVVLIPQVAMRRWLQSTLAAEHGVAANL 115 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLP-QLLEREDFTLLRHYLTDDS 119 +F P F+ R L + + + W+L L L L YL+ D Sbjct: 116 EFLTPGEFVARALERNLG--AADDDLDMATTQWRLYAALQSDLGSDAALAPLAGYLS-DG 172 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 D K + L+ + A +F++Y +R DWL +WE G + QA LW+++ Sbjct: 173 DALKPWALAGELASVFEKYQAWRRDWLLRWEAGADPDDP------QARLWRSIA------ 220 Query: 180 GQPRWHRANLYQRFIETLESAT-TCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 R +RA ++++ A P GLP RVF I + P L+ L + +H Sbjct: 221 -TGRQYRARRIGQYLDRHARADGPLPQGLPPRVFAFAILNISPDVLRVLATQARVGTLHF 279 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 P + YWGD++ + + EQ NP Sbjct: 280 YLPTPTQGYWGDLQTLWQRRREDGAVQL-----------------------FAEQVQENP 316 Query: 299 LLASWGKLGRDYIYLLSDLESSQ---ELDAFVDVTP------------DNLLHNIQSDIL 343 LL +WG GRD++ L+ D E E+ A+ D D+LL +QSD+ Sbjct: 317 LLQAWGAAGRDFMALVGDYEVVHPLAEIAAYADPLESGRRTLADGGLGDSLLRRMQSDLF 376 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE---D 400 A V ++ D S+ H CH+ RE++VLHD+L A+L++ D Sbjct: 377 HRRAPAAEAVLPA----------VNLHDPSLQVHACHTRLRELQVLHDQLRALLDDARFD 426 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 P L PR+I V+ +ID Y P++ AVFGS D LPYA++D S + E F++LL L Sbjct: 427 PPLQPREIAVLSPNIDPYVPYLDAVFGSHGNDDALPYALADASPLASESLAEVFLTLLGL 486 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 P +RF ++L LL +A + E GL LR W++ +G RWG+D + R+ + P Sbjct: 487 PIARFGLHEILDLLASAPIAEAAGLDEAGLERLRSWLHAAGARWGLDAAHRRQHQAPGDD 546 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 +TWRF L R+LLG+A A + V P+ + G + L LL L + LA+ Sbjct: 547 AYTWRFALDRLLLGHA-SGADEDIDGVAPWPQLEGSALAALDTLLRLLRVLERHQAALAE 605 Query: 581 ERPLEEWLPVCRDMLNAFF---LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 EW +L A + A+ + + + A+Y VP ++ Sbjct: 606 AMTPVEWRERLLGLLEALIPTMPTAPRAQRALDRLRALIVQFARDAMRAEYAGKVPAEVV 665 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD-- 695 R A L + L G ++ ++PMR +PF+V+CLLGMNDG +PR+ G + Sbjct: 666 RAHFAAVLGESDTRAPLLTGGISFGRMVPMRLLPFRVICLLGMNDGDFPRRDPAAGLNRL 725 Query: 696 ---LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 L +++ + GDRS R+DDR+LFL+ SAQ Y+SY+G +D S R PSVLV EL+ Sbjct: 726 TAELGTERRRHGDRSTREDDRFLFLQLFASAQDVFYLSYLGADARDGSVREPSVLVSELL 785 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF----------DPQNYQPGERQSY 802 Q H + + L H PF + R SY Sbjct: 786 ASAAQYH------------AASNALDTLVVRHPLQPFAAAAFGALGDESDAGADPRRFSY 833 Query: 803 AREWLPAAS----QAGKAHSEFVQPLPFT---LPETVPLETLQRFWAHPVRAFFQMRLQV 855 R+W PA Q LP LP ++ ++ L+R P F + RL + Sbjct: 834 RRQWRPAVDSLVGQRQPLAPWVAGALPAEGIALPASMSIDALRRLLTDPAGQFLRHRLGM 893 Query: 856 NFRTEDSEIPDTEPFI--LEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFG 913 E D EP + GL +Y + QQ+ +A + D E L+ R RA LP G G Sbjct: 894 RLPDPAGEDADLEPLLAPTRGLDQYGLQQQIFDAALAG-DTEHLYARLRARALLPSGPLG 952 Query: 914 EIFWETQCQEMQQLADRVIACRQ--PGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSL 971 + + +++ AD R P QS + + + +++ G +P G+ R + Sbjct: 953 RRQLDERVAQLRPYADAFRQWRGESPAQSRRLQVQIDEIELHGRVPGWYASGVGRVQVGA 1012 Query: 972 LSVAQGMQLWLEHLVYCASGGN-GESRLFLRKDGEWRFP----PLAAEQALHYLSQLIEG 1026 LS ++ LE L+ A+G + R F DG P PL+ QA L++L++ Sbjct: 1013 LSGRSAIRHGLEWLLLRAAGEHAPYVRFFEHDDGLGPHPIDAQPLSQTQARTALAELLQL 1072 Query: 1027 YREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGD 1086 YR+G+ PL P S + + D + + + ++ + +++ + + G Sbjct: 1073 YRQGLQMPLAFAPYSSWKYHQAARGGDLDKAIKEAAGQWQSGFGWSESHSPELRLVTRGR 1132 Query: 1087 DIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 D + + S R L + Sbjct: 1133 DPF-------ADAQRFAEFAATSHRVYALLEQ 1157 >UniRef50_Q7VBK2 Exonuclease V gamma subunit n=1 Tax=Prochlorococcus marinus RepID=Q7VBK2_PROMA Length = 1103 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 237/1164 (20%), Positives = 449/1164 (38%), Gaps = 114/1164 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML VY SNR + L ++ + + PF+ I+V + ++WL ++ GI+A I Sbjct: 1 MLTVYRSNRAEWLAEVLAAQLRLNKPK-PFQSVEIMVNTWPTSRWLSEQIATFNGISALI 59 Query: 61 DFPLPASFIWDMFVRVLP-EIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 +FP P S + L E+ + +N ++W+++ +LP+LL+ E+ L ++ S Sbjct: 60 EFPFPNSHLRKFVQLFLGLEVTSKDPWNTNQLTWEIIDVLPKLLKEEESKHLHEWIQKGS 119 Query: 120 D-----KRKLFQLSSKAADLFDQYLVYRPDWLAQW-----ETGHLVEGLGEAQAWQAPLW 169 + ++++ L+ A+ ++Y++YRPD +AQW + + L WQ L Sbjct: 120 NNNKELDKRIWTLAKSIANTINEYILYRPDVIAQWWNLDSKPTKSLRDLPPHIKWQPLLL 179 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 + L + L+ LP + I G+S+L P+ ++ +QA Sbjct: 180 RLLKTKIKS-----EPICLQINEVVTRLKRKEHSSKELPRDLLIFGVSSLAPIQIELIQA 234 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L + + + P + W K Sbjct: 235 LSSVVNVQIFLLTPGQDLWKRCKSRRE-----------------------ELGNDWKVPM 271 Query: 290 DGEQDVGNPLL-ASWGKLGRDYIYLLS-----DLESSQELDAFVDVTPDNLLHNIQSDIL 343 DG + P + AS G++G ++ LL L QE D F ++ + L Sbjct: 272 DGMWMLKTPRIEASLGRMGSEFQQLLEGSGEYQLGEWQEKDLFSMPVKIATYNSKEPTFL 331 Query: 344 E-LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 E L+ V + R D+S+ F +R+V+++ D+++ L D T Sbjct: 332 EQLQESLVVNKASIQLHRKHK-------DNSLIFLESPGQRRQVQLIRDQIIQWLATDDT 384 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPA-DRYLPYAISDRRARQSHPVLEAFISLLSLP 461 L PRDII+M + +P I +VF A + LP+ I+DR + +++ + + + Sbjct: 385 LQPRDIIIMTPQVKRLAPLISSVFNDISATNVNLPWKITDRSQIEKPGLIQFILEFIDIA 444 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 SR + ++ LL P L +F + ++ + + + E+G RWGID+ + Sbjct: 445 SSRLTALNLDRLLTNPALQNQFKLDQDEVDRITYCLYETGFRWGIDEKDRN-----GNST 499 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 H+ + L R LLG + + + + S+ + E + +LL L + L Sbjct: 500 HSLEWCLERWLLGIVLPNEPNFVEGDIAPFSSTFTVNE-ITKWWNLLSLLCKHLKALRNS 558 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 R +W+ + ++ ++ L + + + ++++ L Sbjct: 559 RKSNQWVFQLKSIVTDLLENESNRTWEGELFNITIENWSQDSNDCILN--IQPLVIKEIL 616 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 + E +G + I L PMR+IP +V+ L+G+++ V+PR F+L+ QK Sbjct: 617 TELFSLENGRFGHRSGKITISALEPMRAIPHRVIVLMGLDELVFPRSEERPSFNLLEQKR 676 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 GD + D DRY+ LEA++S +Q L I++ R + + + + IDY+ Sbjct: 677 LLGDPNNCDKDRYVLLEAIMSCRQHLLITWNSRDEKTGEKLEAPAPINQCIDYLKNELSE 736 Query: 762 PGDEALNCDESEARV-KAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH--S 818 L + + + P R AR +L ++ + Sbjct: 737 SDQLGLVQSPPPNPLSNENFIATEYQQPISC-----DRRNLEARIFLDNFTKPKQTALGI 791 Query: 819 EFVQPLPFTLPETVPLETLQR-FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR 877 F + + E++ + + + P + + LQ+ R + I + F L L R Sbjct: 792 PFRWEINYKFKESILTNDIVKSWLRAPQITWLE-HLQLRSREKKISIETIDTFNLNELQR 850 Query: 878 YQINQQLL--NALVEQDD--------AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 YQ+ + L +E D+ A+ ++ R G LP + E+ E + L Sbjct: 851 YQLLNEELFTQNNLESDNNVLPILLGADDWQKKLRGQGILPPKSAAELECEILEARIASL 910 Query: 928 ADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVY 987 + + + E +L N IT + Q + +L L A M WL+HL Sbjct: 911 SSLIRDLG---ELEEKNLQINNENITYLIIQ---EDILVVEIGKLKSATIMSAWLQHLQV 964 Query: 988 CASGGNGESRLFLRKDGE----------WRFPPLAAEQALHYLSQLIEGYREGMSAPLLV 1037 C L + + F P+ + A+ L + +G++ V Sbjct: 965 CLYDDKPRKTLIISRSTTKSSQHQYKLSAEFTPILKKDAMEMLQTIYMLVEQGLTECWPV 1024 Query: 1038 LPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR-- 1095 P+SG K Y + ++ F + ++G+ GE + + Sbjct: 1025 PPQSGWELFKARYMKKTNSN-----------NYFKKKWKGSFNQHGENHNSEMILCFGYD 1073 Query: 1096 -QLTPETMEAIVEQSQR-FLLPLF 1117 I E P+ Sbjct: 1074 CDAELFLGNKIFENCLNILYQPIL 1097 >UniRef50_C6NU56 Exodeoxyribonuclease V gamma chain n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NU56_9GAMM Length = 1146 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 325/1163 (27%), Positives = 489/1163 (42%), Gaps = 108/1163 (9%) Query: 4 VYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFP 63 V H +RL+ L + + L P + LVQS + +WLQ L++ GI A I Sbjct: 11 VLHGDRLEDLLTAIRQWLGANPLP-PLVEDTFLVQSNAVGEWLQWQLAEGDGICAGIRVS 69 Query: 64 LPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQLLER--EDFTLLRHYLT--D 117 LPA F+W+ + RVL +P ++ ++K ++ W+L+ LLP+L L YL D Sbjct: 70 LPARFLWESYRRVLGPRGVPDDTVWSKAALRWRLLRLLPRLAHEADPGGVPLLRYLATTD 129 Query: 118 DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGH--------LVEGLGEAQAWQAPLW 169 S + ++L+ ADL DQY VYR DWL W G ++ L + Q WQA LW Sbjct: 130 SSALERRWRLAGLLADLLDQYQVYRADWLKDWAAGRWTLRDGRGVLRDLPQDQRWQAQLW 189 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 L + G R +++ F++ L A LP R+ G +LP L+AL A Sbjct: 190 HWLCREVTEGGSHFAGRGEIHEAFLQRLREAAPGSLDLPPRLIFFGAVSLPAQSLEALAA 249 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 LG+H+++ + NP Y+W D+ + Sbjct: 250 LGRHLQVLMAIPNPSAYHWSDV---------------------AGADEDLRRQRRRRVLG 288 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE---------LDAFVDVTPDNLLHNIQS 340 E G LLA+WG+ GRD++ LL + S E +D F + T LL +Q+ Sbjct: 289 TSEAGFGPRLLAAWGRQGRDFMRLLDRFDESVEMGPLWGLQRVDFFTEDTGTTLLRQLQT 348 Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 I +L + G R L D S+ H + P RE++VL D LL L Sbjct: 349 RIRDLVDSREPG------------RTLAENDDSLVLHSSYGPLRELQVLQDELLLRLGRG 396 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAP--ADRYLPYAISDRRARQSHPVLEAFISLL 458 L PRDI+VMV DI SY+P +QAVFG RY+P+ I D ++ ++ A + LL Sbjct: 397 RGLRPRDIVVMVPDIASYAPLVQAVFGVYGKNDPRYIPFHIVDLTPQERSNLIRALVWLL 456 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 LP R ++ LLD L RF + E L + W+ + G RWG+ + +L A Sbjct: 457 GLPQGRVTQSEIRDLLDCSALQRRFGLAPEDLPQIHAWLEQGGWRWGLSAAHRADLGFAA 516 Query: 519 TGQHT-WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 G T F L +LLGY + + + E L A L+G L L +L WR+ Sbjct: 517 CGAPTSGAFALQSLLLGY-TNGSDSHFDGIEACAEVGSLDAALLGKLWVLWERLESWRQR 575 Query: 578 LAQERPLEEWLPVCRDMLNAFF-LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 L + E W+ R +L FF D A+ +E + + + A + +PL + Sbjct: 576 LKEATTPEHWVERARQLLADFFVASDTADREALEQLESALEDWLLQTEKAAWDGPLPLEI 635 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 R+ L+ FL G V CTLMPMRSIPF++VCLLGMND YPR FDL Sbjct: 636 FREAWLDGLESAGDGA-FLGGGVTFCTLMPMRSIPFRMVCLLGMNDEDYPRPDPRRDFDL 694 Query: 697 MS--QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 M+ + GDRSRR+DDRYL LEAL+SA+ LY+S+ GR ++ R PS L+ +L Sbjct: 695 MTLPDMARPGDRSRREDDRYLMLEALLSARDGLYLSWTGRDPRNQENRAPSALILQLQRE 754 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG 814 I L PF P+ +P +S+AREW P ++ Sbjct: 755 IVGIW-------------GEDALRTRLHLDPLQPFSPRYLEPDGPESFAREWFPVSTVED 801 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 ++ + P + L L+ + + +F+ +RL V D D E F L+G Sbjct: 802 RSVAVLSPPAARL---ELALLDLKGALSDALASFYALRLGVESPWRDRMAADDEAFRLDG 858 Query: 875 LSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI-- 932 L ++QI QQL + G LP A G + + M+ L Sbjct: 859 LGQWQILQQLWERAASPAELREGLAAEARRGHLPLAAAGILQQQRLLTLMESLLGSWQAV 918 Query: 933 --ACRQPGQSMEIDLACNGVQITGWLP------------QVQPDGLLRWRPSLLSVAQGM 978 A + +E + +G ++ LP ++ W + + Sbjct: 919 AEALGPEHEVLEDEFLGDGFRLQARLPKDRSWNANPLGIHLRRHTSKLWHGGKARADRLL 978 Query: 979 QLWLEHLVYCASGGNGES-RLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLV 1037 WLE V G LFL +DG P A L++L+ E + P + Sbjct: 979 LWWLELTVLQTKRREGAVLGLFLGQDGWLCAPA--PVAADESLAELLAWLGEALREPHPL 1036 Query: 1038 LPESGGAWLKTCYDAQNDAMLDDDSTLQK-ARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ 1096 + A L + A + + + + WR Sbjct: 1037 SLDWALALLADADRGDGAGSRRHILGDGRGAAGAWRENWLLQRHFP----NPEAVLEWRS 1092 Query: 1097 LTPETMEAIVEQSQRFLLPLFRF 1119 + ++ ++R P R+ Sbjct: 1093 SAGLSA---LDLARRIYEPYRRW 1112 >UniRef50_D0L8X4 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L8X4_GORB4 Length = 1151 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 276/1197 (23%), Positives = 455/1197 (38%), Gaps = 131/1197 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLS--------Q 52 ML ++ + R D A + LDDP PE++ V + G+ +WLQ L+ + Sbjct: 1 MLHLHRAERTDT-LADALADLLATPLDDPMSPEIVAVPAAGVERWLQQHLATRIGCGTTR 59 Query: 53 KFGIAANIDFPLPASFIWDMFVRVLPEIP----------------KESAFNKQSMSWKLM 96 GIAANI+F PA+ + +L E + + + W ++ Sbjct: 60 SDGIAANIEFLSPAALADAVTAALLTEAAGTDTANAGHEHSAGGGADDPWRPSVLVWSVL 119 Query: 97 TLLPQLLEREDFTLLRHYLTDDSDKR----KLFQLSSKAADLFDQYLVYRPDWLAQWETG 152 +L ++ + ++ ++ + + F + ADLF++Y RP LA W G Sbjct: 120 RVLDDRIDDPELAMIARHVGGGDETSPRIGRRFATARHLADLFERYGRARPTMLAAWAQG 179 Query: 153 HLVEG----LGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLP 208 +G +G +WQ W+AL + H A L A LP Sbjct: 180 RDEDGAGGHIGADLSWQPGFWRALRAEVGRP-----HPAEALGDLCARLR-ANPAVTDLP 233 Query: 209 SRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHS 268 R+ + G + + + L AL +H ++H+ +P W I Sbjct: 234 ERLSVFGPTRVTEEFRALLVALARHRDVHVFLPHPSPVLWEAISSSTVAGDRPEETHSPR 293 Query: 269 FEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVD 328 DR LP + +PLLAS RD L L+ ++D + Sbjct: 294 RADRRLPA------------------IAHPLLASL---SRDVQELELRLQPHADVDVHHE 332 Query: 329 VTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEV 388 ++L + G D ++ P DSS+ H CH P+R+VEV Sbjct: 333 ----SVLG---------HRPTLLGALHAGLCADDLRQQAVPADSSVEIHACHGPERQVEV 379 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR---YLPYAISDRRAR 445 L DRLL + +DPTL PRD+++M D+++++P I+ FG A L ++DR R Sbjct: 380 LRDRLLHLFADDPTLQPRDVLIMCPDVETFAPLIRGAFGQAGLAHPAFALRVRLADRGVR 439 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 Q +P+L+ +++ L R + +V LL + + RFD+T++ L +R W+ S +RWG Sbjct: 440 QVNPILDVVGAVVELAAGRVSAGEVADLLGLEPVRTRFDLTDDDLDRVRDWLAGSNVRWG 499 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV-LPYDESSGLIAELVGHL 564 I L GQ T+ GL R+LLG E GEW LP +L G Sbjct: 500 IGLGQRARFGLDGFGQGTFEAGLDRILLGVVAEEQDGEWLGTALPLAGVESTEIDLAGRF 559 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 A L +L+ L + P + W +++A + + E Sbjct: 560 AEFLARLSTTLEALTETGPRDRWRDALTGVVDALTATSPGDDWQRAQAIRLITDAFGESG 619 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 A+ + L+ +RD +A L F G + +CT++PMRS+P +V+ LLG++ V Sbjct: 620 PAE-PTVLRLADVRDLMAALLAGRPTRSNFRTGELTVCTMVPMRSVPHRVIVLLGIDGEV 678 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 +PR G DL+ P G+R+ RD+DR FL+A+ +A + L + Y G P Sbjct: 679 FPRVQRIDGDDLLGVDPLVGERNPRDEDRQCFLDAICAATETLLVFYSGADPVSGRRIPP 738 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG------E 798 +V+V EL D + A D HT FD +N+ G Sbjct: 739 AVVVSELADTLRTLIDPARSPAAAVDP---------VRHHTLHGFDQRNFLDGGVAGVAG 789 Query: 799 RQSYAREWLPAASQAGKAHSEFVQPLPFTLP--------ETVPLETLQRFWAHPVRAFFQ 850 S+ E L A + V ++P + L+ L F P+ + + Sbjct: 790 PFSHDAELLDGARAMRTPATTAVPMAARSVPVDDDPDEAGDIDLDLLIEFHTDPIAGYLR 849 Query: 851 MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYG 910 RL +S D L+ L + I ++ L ++ E G LP Sbjct: 850 QRLGARIPRAESAHDDQLDVDLDPLESWGIGERFLKRMLGGASIEECQAAELRRGTLPPF 909 Query: 911 AFGEIFWETQCQEMQQLADRVIACRQPGQS-MEIDLAC-NGVQITGWLPQVQPDGLLRWR 968 AFG + Q L V R + +++D+ +G ++ G +P V + Sbjct: 910 AFGTRTLASISTVAQNLYRNVAVLRDGSPAMLDVDVTLPDGRRLYGTVPNVFGQRFVTAT 969 Query: 969 PSLLSVAQGMQLWLE--HLVYCASGGNGESRLFLRKDGEWRFPPLA---------AEQAL 1017 S L Q + W+ + A GN + R A + A Sbjct: 970 YSRLKAKQQLTEWIRIVAVAAAADQGNPVAGRVDSGVVVGRAARGAGAARVTFGRPDDAA 1029 Query: 1018 HYLSQLIEGYREGMSAPLLVL----------------PESGGAWLKTCYDAQNDAMLDDD 1061 L LI G+ PL + P+ G + + + A L Sbjct: 1030 RILHDLIRIRDAGLEQPLPLPAEAAAAFAQHDAGGRRPDWGLVNARRSFSGKFGAHLQPH 1089 Query: 1062 STLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 L + +++ R +D + P ++ PL + Sbjct: 1090 VRLVFGGDALAEVTFEDILARKAVEDNVLAGIMAPADP-DDPLFCALARAIWSPLLQ 1145 >UniRef50_A2C3H2 Possible exodeoxyribonuclease V subunit C 125 kD polypeptide n=2 Tax=Prochlorococcus marinus RepID=A2C3H2_PROM1 Length = 1097 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 227/1162 (19%), Positives = 444/1162 (38%), Gaps = 112/1162 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +Y SN+ + L ++ + + E I+V + ++WL LS I A + Sbjct: 1 MLTIYRSNKAEWLAEILGQELRLNPPE-ITEEVNIIVSTWPSSRWLSEKLSIINNINALV 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKE-SAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 +P P +++ + R++ P E + K + W ++ LLP+L++ E+ ++R +L Sbjct: 60 KYPFPGTYLKRLVKRIIGIDPDEKDPWEKNQLVWNILELLPELMKEEEAQVIRSWLEISD 119 Query: 120 DK-----RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 K L+ L++ A+ FD Y++YRP+ + QW + + E + LW+ ++ Sbjct: 120 KKDTQINLNLWDLANNIAETFDDYILYRPEIIKQWLSKKTKKRSREISVNKNILWQEILF 179 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 + ++ I+ L+ P +++ G+S+L P+ + +QA K I Sbjct: 180 NLLYKKINKDPFCIQVEKAIKRLKKDDISKLDYPKNLYVYGLSSLAPLQIDLIQAFSKVI 239 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 I + +PC W + + D + Sbjct: 240 NIKIYIISPCNDLWQRCEARRLQFRNT-----------------------WNTPPDRQWL 276 Query: 295 VGNPLL-ASWGKLGRDYIYLLS-----DLESSQELDAFVDVTPDNLLHNIQSDILELENR 348 + +P L A G++G +Y LL L E D F +L +I ++ N Sbjct: 277 IESPRLEAFLGRMGAEYQQLLEGSGEYQLGDRNEEDIF------SLTADIATNKGNKPNL 330 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 ++S+N + D S+ F R+VEV+ D +L + ++ + PRDI Sbjct: 331 LEQLQQELLSTKSENILTKEKSDKSLLFLKSPGKYRQVEVIRDYILQLFSDNREIQPRDI 390 Query: 409 IVMVADIDSYSPFIQAVFGSAPAD-RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 ++M +DSY+P I +VF + + LP+ I+D+ ++ ++L + SR + Sbjct: 391 LIMTPQVDSYAPIITSVFNNIDKNTTQLPWVITDKSQEDKVGLIHFVLNLFEISVSRLTA 450 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 LL P L + +I+ + + + + + +G WG+D H+ + Sbjct: 451 SIFENLLINPALRTQQNISIDEVSDIIKNLQSAGFTWGLDSSERY-----GEETHSLCWC 505 Query: 528 LTRMLLGYAMESAQ-GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 L R LLG + + PY E+ AE + +L +L + + +R +E Sbjct: 506 LERFLLGLVLPDNPINGISHISPYSENISS-AEFIKAW-GILSKLCNYIDVIRSKRSCKE 563 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 W+ + ++ F E + + + +++D + + L Sbjct: 564 WIKLITSLVKDLFGDGGEWAWEEQQLLTVVNNWG--LITDNCELEIDCLVVKDIITKALS 621 Query: 647 QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR 706 G + I L PMR+IP K++ ++G+ +PR F+L+ +K + GD Sbjct: 622 STNGKFGHRTGKITISALEPMRAIPHKIIIIMGLESRTFPRIENRRSFNLLERKRELGDP 681 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA 766 ++ D DRY LEALIS +Q L +S+ + + + P +Q+ ++Y+ + Sbjct: 682 NQYDKDRYSLLEALISTRQNLLVSWNSKDEKTGEDLEPPSPIQQWLNYLKIKLGDNTFKD 741 Query: 767 LNCDESEARVKA-HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 + + + + + AREWL A LP Sbjct: 742 ILIEPPANPLDHFNFIKTENSQIMSC-----DRKNLEAREWLEKAI----PTKNISLALP 792 Query: 826 FTLPETVPLETLQR--------FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR 877 + + + L+ + +P + + ++ R + I D + L L R Sbjct: 793 LKR-KEINVSELKSYSFEKTKEWLLNPQITWLKEH-EIQSREFVNLIEDNDFLELSELER 850 Query: 878 YQINQQ------LLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV 931 Y++ + LLN ++D+ + G P G I + + L + Sbjct: 851 YKLLKHRLQSSDLLNINHTKNDSNYWEENYSGKGVFPPKGSGLIEKDLLQERWNNLISAI 910 Query: 932 IACRQ-PGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCAS 990 A + +S+E+ G L++ L M WL HL A+ Sbjct: 911 YATGKITKRSIEMQELEGEFYFGG-------KNLIQIEVGSLKYKTLMNGWLNHLYLSAN 963 Query: 991 GGNGESRLFLRKDGEWR----------FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPE 1040 L + K ++R P+ ++A L QL G + + PE Sbjct: 964 SSFNYKTLIISKKTDYRKKIQFEVSKEILPINTKEAKKNLRQLHRLATAGRNNCWPIPPE 1023 Query: 1041 SGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ---- 1096 SG + D + F + +EG++ +GE + + + + + Sbjct: 1024 SGLDYALATKDNNKNEQ-----------DLFQKKWEGDLYRQGERETLAMELCFGKKCKA 1072 Query: 1097 LTPETMEAIVEQSQRFLLPLFR 1118 T E+ + P+ + Sbjct: 1073 STFLDFESFNDVLMTLYEPILK 1094 >UniRef50_A2C8A0 Possible exodeoxyribonuclease V gamma chain n=4 Tax=Cyanobacteria RepID=A2C8A0_PROM3 Length = 1103 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 250/1168 (21%), Positives = 436/1168 (37%), Gaps = 119/1168 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +Y SNR + L ++ + F+ ++V + ++WL L+ GI+A + Sbjct: 1 MLTIYRSNRAEWLARVLAEQLRLAPP-GLFDSVDVVVNTWPTSRWLGEQLASVNGISALV 59 Query: 61 DFPLPASFIWDMFVRVLP-EIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 FP P S + + +L + E + + W L+ LLPQLLE E+ LR ++ Sbjct: 60 RFPFPGSRLRQLVRMILGIDSDAEDPWRASRLVWPLLDLLPQLLETEEAAPLREWVNRQP 119 Query: 120 DK-----RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL-----VEGLGEAQAWQAPLW 169 + R +QL+ AD FD Y +YRP + QW G + + WQ Sbjct: 120 SRPGHLNRVQWQLARSIADAFDDYALYRPKLIHQWLEGSDRLLNSSQEMPLTLRWQPL-- 177 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 + R + L + LPS++ + G+S+L PV ++ +QA Sbjct: 178 ---LLRLLAERLNVEPFGIQVHRAVSKLRNGDHPAMALPSQLRLFGLSSLAPVQVELIQA 234 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L +++ + PC W + + Sbjct: 235 LSGLVDVQMFLLTPCPDLWQRCRSRRETL-----------------------GNEWTEPA 271 Query: 290 DGEQDVGNPLL-ASWGKLGRDYIYLLS-----DLESSQELDAFVDVTPDNLLHNIQSDIL 343 DG + P L A G++G ++ LL L QE D F Sbjct: 272 DGFWLLEAPRLEAILGRMGAEFQQLLEGGGESQLGQWQEGDLFAAPATMACESG------ 325 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 + DSS+ F C R+V+++ D++L DP+L Sbjct: 326 QEPTLLEQLQQQLVSPDDHQPLRRRQEDSSLQFLACPGQWRQVQLVRDQILQWFAADPSL 385 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADR-YLPYAISDRRARQSHPVLEAFISLLSLPD 462 PRD++VM ++ ++P + +VF A A LP+ ++DR + S + + + LL + Sbjct: 386 EPRDVLVMTPQVNRFAPLLASVFNDAAATGVELPWRLTDRSQQDSPGLTQGMLQLLQIAG 445 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 R + + LL P + + +++ L + + +G RWG+D + H Sbjct: 446 ERLTATALEGLLANPAIQQQQGFSQDDASSLSRCLQRTGFRWGLDAEER-----GGDETH 500 Query: 523 TWRFGLTRMLLGYAMESAQGE-WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 + + L R LLG + S G P+ E GL + LL Q + + + Sbjct: 501 SLIWCLDRWLLGLVLPSTPGLAPGGAAPFAE--GLEPAQLAKWWQLLAQFSRQLKEFRRA 558 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 R W+ + + + F + + +GA + +++ D L Sbjct: 559 RTCGAWVELLQGFVEELFGDGGSWAWERQCLLIALEDWRQ--IGADCTLLLEAAVVADVL 616 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 + L + G + + L PMR+IP +V+ L+G++ V+PR GF L+ Q+ Sbjct: 617 NEALSADSGRFGHRTGALTVSALEPMRAIPHRVIVLMGLDADVFPRHRERAGFHLLEQQR 676 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 + GD D DRY+ LEAL+S +Q L I++ R R + VQ+ + + Sbjct: 677 QLGDPRSSDQDRYVLLEALMSTRQHLLITWNSRDEHTGECRPAASPVQQWLGRLQHELSD 736 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMP---FDPQNYQPGERQSYAREWLPAASQAGKAHS 818 + L + + ++ P D ++++ AR WL Sbjct: 737 ETFQGLCREPAANPLERSNFLSQGSQPPPSCDRRHFE-------ARRWLDKTLAPPPLAL 789 Query: 819 EFV---QPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 + + E L R+ P + + QV R + D E L+ Sbjct: 790 ALPLHWSSVSLEASAVISSELLLRWLIAPQLIWLEQ-FQVTPREWFDPVEDLEALDLDEW 848 Query: 876 SRYQINQQLL-----------NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEM 924 R+ + +Q L NAL++ +A R+ G LP GA + E Q Sbjct: 849 HRHGLLKQRLSELLGHLPTDENALLQGSEAGDWKHRYAGQGTLPPGAAATLECERLEQRW 908 Query: 925 QQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 Q L +++ P + ++LA Q+ D ++ +P L M+ WL H Sbjct: 909 QHLQATLLSM-GPCSTRRLELADGSRQML-----WAGDTVVVVQPGQLKSRGVMEGWLSH 962 Query: 985 LVYCASGGNGESRLFLRKDG----------EWRFPPLAAEQALHYLSQLIEGYREGMSAP 1034 L CA+ + + + + G R+ PL AEQA L L +G+S Sbjct: 963 LQVCANHTLTSATVVVARCGPAAKKDQFEIALRWQPLPAEQAREQLIALQALACQGLSQC 1022 Query: 1035 LLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLW 1094 V P SG A+ ++ + F Q++ G V+GE + Q + Sbjct: 1023 WPVPPMSGWAYANA-----------NNKLAGRGEEAFRQSWSGGFNVQGERERAEMQLCF 1071 Query: 1095 R----QLTPETMEAIVEQSQRFLLPLFR 1118 + + PL Sbjct: 1072 GLNCEASELLNSAGFEQANTSLYGPLVE 1099 >UniRef50_C6HV34 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HV34_9BACT Length = 1124 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 308/1181 (26%), Positives = 510/1181 (43%), Gaps = 129/1181 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVE---RERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAA 58 +R++ S+R+++L + E DP P ++ Q+ +WL L+++ GI+A Sbjct: 3 IRLFESHRMEILAEAFVATLASAAEEGDLDPLRPRTVIPQNPVTGRWLSFYLARRTGISA 62 Query: 59 NIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 ++D PL +I F R+ F+++++ +++ LLP LL F+ + H+ D+ Sbjct: 63 SLDLPLAGRYIRGFFDRLHGPASGTLHFDRETLLLRILALLPDLLPLPAFSPVAHFAGDE 122 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETG--HLVEGLGEAQAWQAPLWKALVEYT 176 + +L+ L++ ADL+D+ ++YRP+ L WE G + + W A LW+ L Sbjct: 123 PESLRLYDLAALLADLYDRSMIYRPELLLAWEEGLGGRDDDPVGPEGWPAVLWRLL---- 178 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKH--I 234 HRA + RF+ P LP + + G++ + P+ L+ + LG+ Sbjct: 179 -SGPDRPLHRARMMVRFLSG--EDPVPPEILPPALTLFGLTGMAPLDLRFFRTLGERHGC 235 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 + L F NP R YWGD+ +R+R + E + LFR Sbjct: 236 AVDLFFLNPSREYWGDVV--------RSRRREETPESLQPYLFR---------------- 271 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 G PLL+SWG R L+++ + F P LL IQ DIL L +R + Sbjct: 272 -GTPLLSSWGGEFRTVHESLAEIPEAHR--LFFGTEPGGLLGQIQEDILTLFDRGEEVRS 328 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 ++ + D S+ RE+E+L DRLL + DPTLTP D++V+ D Sbjct: 329 GR-----IERKEIPRADRSVEIVSATGRVREIEMLRDRLLELFAGDPTLTPEDVVVLAPD 383 Query: 415 IDSYSPFIQAVFG---------------------SAPADRYLPYAISDRRARQSHPVLEA 453 I Y+ +++VF S D +P+ ISDRR + P +A Sbjct: 384 ILPYAGIVRSVFSPGISPSGGRAGTNGGEGSAGSSEDGDPRIPFVISDRRETDASPAFQA 443 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 + LLSLP R ++ LL VP +A RFD+ + + +R+ + E G RWG D ++ E Sbjct: 444 LLLLLSLPGERVTVSHLVTLLAVPSIARRFDLGGQKIDRIREILAEGGFRWGRDIEDRSE 503 Query: 514 LELPATGQHTWRFGLTRMLLGYAM-ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 + P+ H++ +GL R+LLGYA E V P + E+ G L+ L L+ Sbjct: 504 V-APSVDTHSFFWGLDRLLLGYACGPEEAPEGLPVPPVAVTEDPGGEIAGALSRFLWTLD 562 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 L P EW + +L FF P AE + + ++ I A + + Sbjct: 563 RHLERLKDPHPAREWPGLLATILEIFFDP-AEGDPVLEILFALPGEIREGFSRASFDGEI 621 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 + +A+ + RFL G V+ ++P+RS+PF+VVCLLG+NDG +PR P Sbjct: 622 SSRWMGRHIARMAESREGRDRFLTGGVSFGRMVPLRSLPFRVVCLLGLNDGEFPRVHHPP 681 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 FD ++ +P+ GDRSRR+DDR LFLEAL+SA+Q L++SY+GR +D S + PSVL++E Sbjct: 682 SFDWLAARPRPGDRSRREDDRTLFLEALLSARQVLWLSYLGRESRDGSPKEPSVLLREFE 741 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY---QPGERQSYAREWLPA 809 D + + G ++ + P P +Y S++R W Sbjct: 742 DVVAEGFTGEG---------GEEIQKQILLEAPVDPLSPSHYGDSPDPRLHSFSRSWREV 792 Query: 810 ASQAGKA--------HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 + + + P+P + L+ L+ F ++P R F RL + R + Sbjct: 793 LDASRNDGWKAPVFWDRDLLLPMPEPGAAGILLDDLRFFHSNPARFFLLRRLGFSSRARE 852 Query: 862 SEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC 921 ++PD EPF L L +++ D +R +P+ G + Sbjct: 853 IDLPDDEPFSLS-----------LREILKGLD-----QRSFEVDGIPWPPLGPLQLSEGI 896 Query: 922 QEMQQLADRV----IACRQPGQSMEIDLACNGVQITGWLPQV---QPDGLLRWR---PSL 971 + R+ +++EI L GV++ G L + G +R P Sbjct: 897 RHKGDHVGRIGRLLGLLSGEPEAVEISLELLGVRLVGRLSGILTKTEGGRVRVVDLWPGK 956 Query: 972 LSVAQGMQLWLEHLVYCASGGNGESRLFLR----KDGEWRFPPLAAEQALHYLSQLIEGY 1027 + + + +LEHLV C L + F P A L +E + Sbjct: 957 IYPSHQVTAYLEHLVACRGIPGYVGTLLCGVVPHNPEAFLFWPSPP--AEGGLESFVEAF 1014 Query: 1028 REGMSAPLLVLPESGGAWLKTCYDA--QNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEG 1085 + PL PE A+++ + ++++ ++A + A G Sbjct: 1015 QVAGERPLPFDPEISLAYIRKIRSKAAREVQEGEEETVGRQAAMRAWDAPAPPDRDEGLR 1074 Query: 1086 DDIWY-----QRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 D +RL+ + R L PLFR Q Sbjct: 1075 DPRSLPTFWSRRLFAGRPLPLEPDFPSWAHRLLDPLFREQQ 1115 >UniRef50_A6W6P1 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W6P1_KINRD Length = 1158 Score = 641 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 271/1214 (22%), Positives = 462/1214 (38%), Gaps = 161/1214 (13%) Query: 1 MLRVYHSNRLDVLEALMEFIVER-ERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG---- 55 ML V+ S + L + ++ DPF P+++ V + G +W+ LS G Sbjct: 1 MLHVHRSESANTLVTALAGLLRDPAPGADPFAPDVLAVGARGTERWIAQRLSHHLGAGDP 60 Query: 56 --------IAANIDFPLPASFIWDMFVRVLPEI-----PKESAFNKQSMSWKLMTLLPQL 102 I A +D PA + + L + S++W ++ +L ++ Sbjct: 61 AAGGGDDGICARVDTSSPAHLLDGVLAAALERTRPGTGDAVERWAPSSLTWDVLEVLDEI 120 Query: 103 LE---------REDFTLLRHYLTDDSDKRKLFQLSSKAA-------------DLFDQYLV 140 R +F LLRH+L LF +Y Sbjct: 121 APADGGPAPDGRPEFALLRHHLRHHPGDDGPGGPGGPGTPPVRRTAAAARVAGLFARYGA 180 Query: 141 YRPDWLAQWETGHLVEG---LGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETL 197 RP LA W G L WQ +++A+ E A L L Sbjct: 181 ARPQLLADWAAGRDDAPGAPLPADLRWQPEVFRAVRERVGLPA-----PAELLDDACAAL 235 Query: 198 ESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYL 257 + L R+ + ++ L L+ L AL +H E+HLL +P W Sbjct: 236 RT-DPALSDLGPRLAVFLVTRLATSRLRVLSALAEHREVHLLLQHPSPALW--------- 285 Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYI-YLLSD 316 ++ + +PLL S + R+ L Sbjct: 286 --------------DATAAALRTDPGPRRAAWAAHAPGRHPLLRSMARDVRELQVRLAHA 331 Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITF 376 ++ LL +Q+ + ++ DP D S+ Sbjct: 332 APGHTDVHHPAPEPAPTLLGTLQAALA---------------RDAEPAPGPDPGDRSVQV 376 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG-SAPADRYL 435 H CH R+VEVL + +L +L+ DPTL PRD++V D+++++P + A F + L Sbjct: 377 HACHGRARQVEVLREVVLGLLDADPTLQPRDVLVACPDVETFAPLVSAAFATDSHPGGGL 436 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 ++DR A +++P+L + LL L SR + +VL L + RFD+ +E L LR+ Sbjct: 437 RVQVADRSALRTNPLLGLAVRLLGLAQSRAGATEVLDLAAAAPVRRRFDLDDEDLEQLRE 496 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES-----------AQGEW 544 W +G+ WG+ + +L + Q TWR GL R+L+G A+ G Sbjct: 497 WTVAAGVHWGLSARHRGAWQLGSLDQGTWRAGLDRLLVGVAVGGAVEDDLVGRTGEDGLL 556 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 +V+P + +L G A LL +L+ L + W D + E Sbjct: 557 GAVVPLADVESSRIDLAGRFAELLDRLDAAVTRLQGRHGVAAWCDTLLDAVLDLADTAPE 616 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 + + ++ + + A V L+ + +++R F G + +CT Sbjct: 617 DAWQVAQLRRELGVVAHDAARA-GTARVGLTDVAATISERFAAHPQRANFRTGALTVCTP 675 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 P+R++P +VVCLLGM+DG +PR P D++++ P GDR R +DR + L+ + SA+ Sbjct: 676 APVRAVPHRVVCLLGMDDGAFPRAGGPDADDVLARDPHVGDRDPRGEDRQVLLDLVRSAR 735 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 L ++Y GR ++ + P+V V E++D + +H V+A + H Sbjct: 736 DALVVTYSGRDVRTGAVLPPAVPVGEVLDALEAAH--------------PGVRARIEVHH 781 Query: 785 TRMPFDPQNYQPGER-----QSYAREWLPAASQAGKAHSEF----VQPLPFTLPETVPLE 835 P D +N+ PG S+ A + + LP + L+ Sbjct: 782 PLQPTDRRNFTPGALGTDGPFSHDGTAFSGADAGHREPAPVPPFLPAALPPAPAADLDLD 841 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE 895 TL +F HP R F + RL V T + E D P L+ L ++ + + L A + A Sbjct: 842 TLVQFLQHPARGFLRQRLDVASATREEEPDDALPVQLDALQKWAVGDRALAARLRGVAAP 901 Query: 896 RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA-CRQPGQSMEIDLACN-----G 949 + R A G LP G G + +A P +S++++L + Sbjct: 902 EVVRLEGARGGLPPGPLGVAVLREVGPVVDAIAGVAAEFDTAPPRSVDVELDLDVPGVGQ 961 Query: 950 VQITGWLPQVQPDG---------LLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFL 1000 +++TG + V+P + S + Q ++ W+E L A+ E R L Sbjct: 962 LRLTGNVRGVRPVRGGGRATGEVAVTTVYSRIKGKQTLRAWVELLALSAAHPGTEFRTVL 1021 Query: 1001 ------RKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQN 1054 G P+ ++ A L L+E G+ PL + ++ AW + + + Sbjct: 1022 VGRGDRGSTGLLTLGPVRSDAARDLLVDLLELRAVGLRFPLPLPVDTAAAWAQEAWRGR- 1080 Query: 1055 DAMLDDDSTLQKARTKFLQAY--------EGNMMVRGEGDDIWYQRLWRQLT---PETME 1103 D+ L+ AR + + E N+ V G + + W T P Sbjct: 1081 ----APDACLRAARRAWTSDFSFDKEDRQEENVTVWGAERPVEHLVRWEPPTTLPPGVPT 1136 Query: 1104 AIVEQSQRFLLPLF 1117 +R PL Sbjct: 1137 TFEGLVRRVWEPLL 1150 >UniRef50_A5GLW8 Exodeoxyribonuclease V gamma chain n=4 Tax=Synechococcus RepID=A5GLW8_SYNPW Length = 1105 Score = 635 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 260/1172 (22%), Positives = 443/1172 (37%), Gaps = 119/1172 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 MLR+Y SNR ++L L+ + PFE ++V + ++WL L+ GI+A + Sbjct: 1 MLRIYRSNRAELLAQLLAQELNLNPP-GPFEQVEVVVNTWPTSRWLGERLASFNGISALV 59 Query: 61 DFPLPASFIWDMFVRVL-PEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD-- 117 FP P S + + VL E P E + + + W ++ +LPQL++ E+ LR + + Sbjct: 60 RFPFPGSRLRQLAQAVLSKEPPLEDPWRAERLVWTVIAVLPQLMQCEEAKPLRQWWNNQR 119 Query: 118 ---DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 D+ R+ + L+ + AD D Y +YRP LA W G + L WQ L +AL E Sbjct: 120 TTSDALTREQWLLARQLADAVDDYALYRPQDLAGWLAGDDGDHLPAVLRWQPLLVRALAE 179 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 P Q+ ++ L S LP R+ + G+S L PV + LQAL + Sbjct: 180 RL-----PCEPFGLQVQQAVDQLRSGQAPATPLPKRLRLFGLSNLAPVQIDLLQALAAVM 234 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 ++ L PC W + DG Sbjct: 235 QVELYLLTPCPDLWERSAQRRRRL-----------------------GENWTASPDGTWL 271 Query: 295 VGNPLL-ASWGKLGRDYIYLLSD-----LESSQELDAFVDVTPDNLLHNIQSDILELENR 348 + P L A G++G ++ LL L S+ + D F D Q +LE R Sbjct: 272 IEAPKLEAILGRMGGEFQLLLEGSGDCLLSSTDQADLFADPVAMAASEGRQGSLLEQLQR 331 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 +A + D S+ F C P REV+++ D++L + +D TL PRDI Sbjct: 332 QLASSEHFPLQHT-------SADRSLLFMGCAGPWREVQLVRDQILHWMADDSTLQPRDI 384 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRY-LPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 +VM D++ Y+P + +V A LP+ ++DR + S + +AF++LL L R + Sbjct: 385 LVMTPDVERYAPLLASVLSDQDATGVDLPWRLTDRSQQNSPGLQQAFMTLLQLSAERLTA 444 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 + AL+ P + + + + SG RWG+D + H+ R+ Sbjct: 445 TGLEALMSNPAFLDLQGLEAQEAMDITAALQRSGFRWGLDREERH-----GDDTHSLRWC 499 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 L R L+G + G + L + + LL Q+ W L Q W Sbjct: 500 LDRWLIGLILPDEPGLALGSCA-PAVADLSLQQLERWWPLLDQIAQWIAQLRQSGSCTVW 558 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 + R +L+ F + + I+Q + + + + + +++ L + L Sbjct: 559 VERLRRLLSDLFGDGGAWDWELQAIQQGLETWLIQAGHCELN--LETTVVIAVLEEALSA 616 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + +G + + L PMR+IP +V+ L+G++ +PR GF L+ ++ + GD S Sbjct: 617 DSGRFGHRSGAMTVSALEPMRAIPHRVIVLMGLDAASFPRTRERPGFHLLERQRRLGDPS 676 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 D DRY+ LEAL+S++Q L IS+ R + P VQ+ ++ + Q + Sbjct: 677 STDQDRYVLLEALLSSRQHLLISWSSRDERRGDALPPCPPVQQWLNLLRQELSEEAMAQV 736 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP-- 825 + + A R AR+ L H+ LP Sbjct: 737 LIEPPANPLDAANFIPAKTHALSC-----DRRLLQARQCLDDPQGRAPGHAPLGLALPIH 791 Query: 826 -----------FTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 T + +E L+R+ P RA+ + R + + D P L Sbjct: 792 WPPEAPPPPAHATTLNSDQVEQLERWLQAPQRAWLRER-GIEAGEWCDAVEDRAPLALPE 850 Query: 875 LSRYQINQQLLNALVEQDDAE-----------RLFRRFRAAGDLPYGAFGEIFWETQCQE 923 + + + L +++ R + G LP GA G + Q Sbjct: 851 RTLRALITERLRDELDRLKTHPEARWDVTRSGEWIRWSQGRGLLPPGAGGALDDIRLEQR 910 Query: 924 MQQLADRVIACRQPGQSMEID-LACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWL 982 + L + + Q + LA + + G + S L ++ WL Sbjct: 911 WKNLQTTLFSLGSLQQPPRWERLATPPLPMAGETA-------VLISASKLQARSVLEGWL 963 Query: 983 EHLVYCASGGNGESRLFLRKDGE---------WRFPPLAAEQALHYLSQLIEGYREGMSA 1033 +HL+ +G + + R + R+ P+ ++QA LS L EG Sbjct: 964 KHLLNQRAGRAAPTVVICRGESSSKAETFSIAMRWLPMESQQADGLLSDLFALAEEGRRI 1023 Query: 1034 PLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRL 1093 + PESG A ++ A F + G + E + Q Sbjct: 1024 CWPIPPESGLARAVALAKGRDV-----------ADRAFSACWHGGIKRWAERERSDLQAC 1072 Query: 1094 WRQLTP----ETMEAIVEQSQRFLLPLFRFNQ 1121 + + PL + Sbjct: 1073 FGNGCDAERLLSSPGFDSAFDSLYAPLLEARR 1104 >UniRef50_Q3AJ30 Exodeoxyribonuclease V, gamma subunit n=5 Tax=Synechococcus RepID=Q3AJ30_SYNSC Length = 1081 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 270/1164 (23%), Positives = 438/1164 (37%), Gaps = 134/1164 (11%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML VY SNR + L L+ + ++ P E ++V + ++WL L+ GI++ + Sbjct: 1 MLTVYRSNRAEFLARLLSRQLIEQQP-GPLETVEVMVNTWPTSRWLGEQLATANGISSLV 59 Query: 61 DFPLPASFIWDMFVRVLPEIP-KESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD-- 117 FP P S + + +VL ++ + + W ++ LLP+LLE+ LR +L Sbjct: 60 RFPFPGSRLRQLVRQVLHLPAQEDDPWRAGQLVWAVLELLPELLEQPVAQPLRVWLAQRE 119 Query: 118 ---DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 R +QL+ AD D Y +YRPD L QW+ + WQ LW+ L + Sbjct: 120 GTASGLTRDRWQLARSIADAMDDYALYRPDQLEQWKQPRPDDD------WQPVLWRLLAQ 173 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 PR + +E L P LP R+ + GISAL PV + +QAL + Sbjct: 174 RL-----PRAPFGLQVREAVECLRRGDVDPALLPERLRLFGISALAPVQVDLIQALSGLL 228 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 + + PC W L DG Sbjct: 229 AVEIYLLTPCPDLWQRCGSRRASL-----------------------GDEWLIPPDGGWL 265 Query: 295 VGNPLL-ASWGKLGRDYIYLLS-----DLESSQELDAFVDVTPDNLLHNIQSDILELENR 348 P L A G++G ++ LL L +E D F ++Q E Sbjct: 266 AEAPRLEAVLGRMGAEFQQLLEGSGEAQLGERREGDLFA--------GSLQIAAAEERQP 317 Query: 349 AVAGVNIEEFSRSDNKRPLD--PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 + ++ +++ L+ D S+ F P REV+++ DR+L L DP L PR Sbjct: 318 TLLDQLQQQLVDAESIAELNRSSDDQSLLFQAAPGPWREVQLVRDRILQWLAADPDLEPR 377 Query: 407 DIIVMVADIDSYSPFIQAVFGS-APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 D++VM I+ Y+P + +VF A LP+ ++DR + S + A +LL L +R Sbjct: 378 DVLVMTPQIERYAPLLSSVFNDTAAFGVDLPWRLTDRSQQSSPGLSMAMFTLLELAATRL 437 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 + + LL P L + +T E + Q + SG RWG+D H+ R Sbjct: 438 TATGLERLLANPALQGQQGLTPEEAVLITQTLQRSGFRWGLDARER-----GGDEVHSLR 492 Query: 526 FGLTRMLLGYAMESAQGE-WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 + L R LLG + G P+ + L + + +LL ++ L + RP Sbjct: 493 WCLDRWLLGLVLPVEPGLAPAGAAPFQQ--ELDPDRLVRWWTLLDRVARMLDRLREPRPC 550 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 W+ + + +L F + + ++ + L + Sbjct: 551 HGWVELLQSLLQELFAEGGAWTDEAQSWAAALEEWRLRAHDCPLD--LDAAVALEVLQEA 608 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 L + +G + I L PMR+IP KVV L+G++ +PR GF L+ Q+ + G Sbjct: 609 LSVDSGRFGHRSGALTISALEPMRAIPHKVVILMGLDSADFPRPSRRPGFHLLEQQRRLG 668 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 D D DRY+ LEAL+SA++ L IS+ GR + + P+ V++ + + + G Sbjct: 669 DPRSSDQDRYVLLEALMSARRHLLISWCGRLERTGEPQPPAAPVEQWLSVLQEQLQRAG- 727 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP- 823 L P +N++P S R L A A + P Sbjct: 728 ----------ASTEGLLVTPAANPLSRENFRPEAPLSCDRRQLEARRCLDAAPASVPNPQ 777 Query: 824 ----LPFTLPE--------------TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 PE + E L + P +A+ Q R + + Sbjct: 778 GLAWASLWQPEINDDEAEGRDGDDLALDPEALLAWLQQPQKAWLQAR-GLRPGEGIEAVE 836 Query: 866 DTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 D E LEGL RY + L A G LP GA + E Q Q Sbjct: 837 DLEALELEGLQRYLLLNHELEEQFILGSAPDWTASLAGQGVLPAGAGAALEQEELQQRWQ 896 Query: 926 QLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL 985 L ++ + + + + LA + + D + +P +L+ A M+ WL+HL Sbjct: 897 ALQRQLASLGPCRREVPV-LAGLPMPLLY-----AGDTQVVVQPGMLTAAAVMRGWLQHL 950 Query: 986 VYCASGGNG--------ESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLV 1037 + CA G S + R+ L +A L QL R+G+ V Sbjct: 951 LLCAEGSAPAAGSAVVARSTRVAGAEVHVRWSVLPTVEAEDQLQQLARLARQGLERCWPV 1010 Query: 1038 LPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ- 1096 P+SG + + D F + ++ EG Q + Sbjct: 1011 PPKSGWQMVAKERRKPGEGQQD-----------FRKTWQD------EGATPLMQLCFGSD 1053 Query: 1097 -LTPETMEA--IVEQSQRFLLPLF 1117 + M+ + Q PL Sbjct: 1054 VAAEQLMDQAGFQQACQLLYGPLM 1077 >UniRef50_Q05XZ7 Possible exodeoxyribonuclease V gamma chain n=1 Tax=Synechococcus sp. RS9916 RepID=Q05XZ7_9SYNE Length = 1078 Score = 615 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 256/1151 (22%), Positives = 430/1151 (37%), Gaps = 107/1151 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWL--QMTLSQKFGIAA 58 ML +Y SNR +VL ++ + E ++V + ++WL Q+ L+ GI A Sbjct: 1 MLTLYRSNRSEVLADVLAANLSLHPP-GVLEEAQVVVNTWPTSRWLGEQLALANPSGITA 59 Query: 59 NIDFPLPASFIWDMFVRVLPEIPKE---SAFNKQSMSWKLMTLLPQLLEREDFTLLRHYL 115 N+ FP P S + +L + + Q++ W L+ LLP+LL+ L+H+L Sbjct: 60 NLRFPFPTSLLRHTVDGLLEQQSSGGGADPWRAQNLVWPLLELLPELLDHPASAPLQHWL 119 Query: 116 TDDSD------KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLW 169 L+QL+ AD D Y +YRP L W G + G + Sbjct: 120 NTRKSAALEVLDPPLWQLARAIADAIDDYSLYRPAMLEAWLKGQATDARGTPLSPTMLW- 178 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 + + ++ I L+ + + G+S+L PV ++ LQA Sbjct: 179 QQQLMQQLHSRLGCLPFGMRARQLIRRLQEGWRPERPPQPPLRLFGLSSLAPVQVELLQA 238 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L I L PC W QR+ S E + + Sbjct: 239 LSCLRSIELYLLTPCPELW---------------QRQSSIESQAPLDEEWLLTVPSVE-- 281 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLS-----DLESSQELDAFVDVTPDNLLHNIQSDILE 344 A +G+LG ++ LL L S + LD F + +LE Sbjct: 282 -----------ARFGRLGAEFQQLLEGSGETQLGSWRALDPFFFPATTASSQGKEPTLLE 330 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 + + P D S+ FH C R+++VL D++L +L D +L Sbjct: 331 QLQEHLVHGTPTDLL------PRTEDDQSLQFHACPGRLRQLQVLRDQILQLLANDDSLE 384 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADR-YLPYAISDRRARQSHPVLEAFISLLSLPDS 463 PRDI+VM +++++P + AVFG A LP+ ++DR + + + + LL+L Sbjct: 385 PRDILVMTPQVEAFAPLVSAVFGDNDATGVRLPWRLTDRSQQSEAGISQGVLQLLALGGE 444 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 R + + +L L + + + Q + ++G RWG+D + H+ Sbjct: 445 RLTASALETVLANAPLLRAHQLEPDEAEDITQSLQQAGFRWGLDSRDR-----GGDPTHS 499 Query: 524 WRFGLTRMLLGYAMESAQGE-WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 + + R++LG G ++ P L + G LL QL + L+ R Sbjct: 500 LAWAIDRLVLGVVYPETPGLALENTAPMALPGSLEQQ--GRWLGLLRQLQRSLQWLSHSR 557 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 ++ W+ R L A F + + I + + ++ + LA Sbjct: 558 SVQAWVEGLRPQLMALFADGGDWAWELQTIHSVLTDWGEVAGNSSLE--LSAPVVGEVLA 615 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 +RL + +G + I L PMR+IP KV+ L+G++ G +PRQ GF LM Q+ Sbjct: 616 ERLSEGSGRFGHRSGALTISALEPMRAIPHKVLVLMGLDAGAFPRQRQRPGFHLMEQQRL 675 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 GD S D DRY+ LEAL+SA+Q L +S+ R + S V++ ID + Q Sbjct: 676 LGDPSSGDQDRYVLLEALLSARQHLLVSWSCRDERTGEPLEASTPVRQWIDLLPQVPVRE 735 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF-- 820 + +A +R R+ L A + G A F Sbjct: 736 HAANALERSNFLPSEAWPPA------------SCDQRLLQVRQHLDAGTIGGTAGLAFSI 783 Query: 821 -VQPLPFTLPETVPL-ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRY 878 P + + L + P + + + L + R ++ + D E L+ R Sbjct: 784 TPHKSPDGPALPLSAWDDLISWVTAPQKQWLEQ-LGLRPREHENAVLDLEDLSLDERQRS 842 Query: 879 QINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG 938 + +Q L E++ R G LP + G + Q L+ + + + Sbjct: 843 ALLRQELGRDQEENAEPDWLALDRGRGQLPPHSAGALEAHQLEQRWTSLSTCLSSLGEER 902 Query: 939 QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL 998 + ++ Q L D L+ + Q QLWLE L+ A+G S + Sbjct: 903 RD---AVSMGPWQAELSLRD---DQLVLVHTARPRSPQRQQLWLELLLATAAGSKLRSAV 956 Query: 999 FLRKDGEW-----RFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQ 1053 + +DG R P +Q L Q + + PE+G A+ Sbjct: 957 LVGRDGHRFRVLERISPPTRDQCTALLDQHQAWREQYQQRCWPLPPETGWAFA------- 1009 Query: 1054 NDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR---QLTPETMEAIVEQSQ 1110 K +K A+EGN ++ GE D Q + L + + Sbjct: 1010 ------VGEAKGKGWSKARDAWEGNAVLAGERLDAVQQLCFGSDLPLGDLLTDDAQALAL 1063 Query: 1111 RFLLPLFRFNQ 1121 PL Q Sbjct: 1064 TLHGPLLERRQ 1074 >UniRef50_A3ETY6 Putative exodeoxyribonuclease V, gamma subunit n=2 Tax=Leptospirillum sp. Group II RepID=A3ETY6_9BACT Length = 1095 Score = 609 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 254/1177 (21%), Positives = 450/1177 (38%), Gaps = 152/1177 (12%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML ++ SNR++ L + ++ + P+ P IL Q+ + +WL L+ G+A NI Sbjct: 1 MLVLHVSNRMERLTDQLFSVIRDDPPP-PWSPVTILPQNPTIGRWLTYRLADVQGVAMNI 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 PLP ++I D + F + ++ +L+ +LP L + F+ RHYL + Sbjct: 60 ATPLPGAWIRDFLETGFGRSGQVVHFERNALFLRLLRILPALRDDPVFSEFRHYLGEGDP 119 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 R+L LS + ++LFD+ ++YRP+WL WE E +W A LW+ + H Sbjct: 120 SRRLVSLSDELSELFDRAMLYRPEWLTSWED------FPEDLSWPAVLWRNVAGKDH--- 170 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGK--HIEIHL 238 H A L F + LP R+F+ G+S + P L +G+ ++H Sbjct: 171 --PAHFARLLHEFHSLPVLDSLWQEALPDRLFLFGLSGIAPATLDIFFRIGRETSCQVHF 228 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 F NP YW D+ + + D G+P Sbjct: 229 FFLNPTDRYWADMVSLRSWEHMEEELKP-------------------------YFDPGHP 263 Query: 299 LLASWGKLGRDYIYLLSDLESSQE-----LDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 LLA G+ RD L + ++ + F + L +Q + ++ A Sbjct: 264 LLAFLGRTARDLHKKLEEGIRPEDPVADIRECFEEPEGTTTLSRLQRSLFRMDAAAEFLE 323 Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA 413 + P D S+ S REVE L D LL P L D++++ Sbjct: 324 RL-------------PDDGSLRIVSSPSVVREVETLRDFLLDRFLAQPDLRLEDVVILAP 370 Query: 414 DIDSYSPFIQAVFGSAP-----ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 + + Y+ I+AVF + + L +SDR ++ + + + LL LP Sbjct: 371 ETELYAGTIRAVFEATGESGRAGEPVLSVTVSDRPPFEA-ALADVLVGLLRLPVFPLTLS 429 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 V LL + RF + + L + + +G RWG+D + HT + + Sbjct: 430 FVQRLLSFQTVLDRFSLDRKMASELLEALARAGFRWGVDKQDRTR---DEPEDHTLDWAV 486 Query: 529 TRMLLGYAME-SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 +R+L GY QG V P+ E G L LL WR L+ L W Sbjct: 487 SRILEGYCTGIEEQGLVFPVSPFVLPDDPQGEKAGILFRLLDLFRSWRDRLSGRHALSAW 546 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 +L+ FF+ D + + + + Q + + + + + ++ + L++R+ + Sbjct: 547 AESVSALLSDFFVLDPDRDRDLFALGQSLRELCRDIHDV---EDMDCMMVTEMLSRRIFR 603 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 RF +G + ++P+RSIPF++VCLLGM + +PR FD + + P+ DRS Sbjct: 604 TTWRDRFFSGGITFGRMVPLRSIPFRIVCLLGMGESAFPRNDVAQSFDFLRESPRPLDRS 663 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 R+DD +LFLE L+SA+ L+ISY+G D + PS V++L++ + + Sbjct: 664 VREDDLHLFLEILLSARSSLWISYVGGEGGDGTTGLPSPPVRQLLETLREPFPPEKKG-- 721 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNY--QPGERQSYAREW----LPAASQAGKAHSEFV 821 L PFDP + + G S++ +++ + S FV Sbjct: 722 ----------QGLFREVPSDPFDPSCFSREAGSWGSFSSSRAGIVRSRSTRTDSSPSFFV 771 Query: 822 QP-----LPFTLPE-----TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI 871 LP + + L LQ F+ +P + L + E + D EPF+ Sbjct: 772 PKKGRLVLPKGPEDRGSGRRISLSRLQSFYRNPPFYQAKNVLNLAVAGERPLLLDEEPFL 831 Query: 872 LEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV 931 L+ + P+ G + E Q ++ ++ +R+ Sbjct: 832 LDP-----------------------SQEMADPAQNPWPPVGPLQREQQTRKRRERRERL 868 Query: 932 IACRQPGQ-----SMEIDLACNGVQITGWLPQVQPDGLLRWR--PSLLSVAQGMQLWLEH 984 + + Q + L G + G L + GL+ P L ++++L H Sbjct: 869 LGGFEGLQEDHTETRRFSLGIGGSLLFGTLSLYRETGLIVQDPFPWALRPPDLLRVFLAH 928 Query: 985 LVYCASGGNGESRLFLRKDGEWR---------FPPLAAEQALHYLSQLIEGYREGMSAPL 1035 L + + L ++ E+A L + YR + Sbjct: 929 LAGSLAFSFYRGTVLLNLAKDFPRTDSTDRPVLWSSEPEEATRLLRPYLVLYRRFRTRTF 988 Query: 1036 LVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQ------------AYEGNMMVRG 1083 +P A+ Q D + A+T + Q +++ Sbjct: 989 PFVPAVSLAYALE-QRNQRGRGPDPRKAIAAAQTAWRQLDPWRTDHGQKNSWKSPFRKDP 1047 Query: 1084 EGDDIWYQRLWRQLTPETMEA--IVEQSQRFLLPLFR 1118 + +Y L+ + ++ +Q+ P+ Sbjct: 1048 RRREGFYPHLFFDPEGDWIKDPFFGLLAQKLWNPILD 1084 >UniRef50_B2I2P5 Exonuclease V gamma subunit n=14 Tax=Acinetobacter RepID=B2I2P5_ACIBC Length = 1211 Score = 604 bits (1557), Expect = e-171, Method: Composition-based stats. Identities = 252/1133 (22%), Positives = 459/1133 (40%), Gaps = 127/1133 (11%) Query: 2 LRVYHSNRLDVLEA--LMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 + V S R+DVL L + + +V S + QWL L+++ G++AN Sbjct: 3 IHVIQSQRIDVLLQGVLASTSQPSTHPLQVLKAQHFIVPSPAIEQWLIQKLAEQQGMSAN 62 Query: 60 IDFPLPAS-FIWDMFVRVL---PEIPKESAFNKQSMSWKLMTLLPQLLE---------RE 106 F F W + +VL E +++ + W++ L + ++ Sbjct: 63 YQFHQRVRGFQWYAYQQVLTAHKEQVRKANIPRLIFKWRVHQALQEFIQPDVMSIDSSHP 122 Query: 107 DFTLLRHYLTDDSD------------KRKLFQLSSKAADLFDQYLVYRPD---------- 144 ++++ + D +D ++ L+ ++ + ADLF Y+VYR Sbjct: 123 LHSIVQR-IYDSADRLEQGIEKQLKKQKMLYWVAEQVADLFSNYMVYRGQCQRGCENMCT 181 Query: 145 ----WLAQWETGHLVE------------------GLGEAQAWQAPLWKALVEYTHQLGQP 182 WLA W G ++ E + WQ LW+ ++ H+ Sbjct: 182 CPNNWLAAWGQGRSLDIEKYIAHKDKEVSAFTLQQTQELERWQRWLWQ---QHFHEDFMQ 238 Query: 183 RWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTN 242 L+ + +E E LP ++ I + LPP LQ L+ LG++I++ +L N Sbjct: 239 MQQIDELFWQELEHPERQKKALSRLPQQIVIFTLLDLPPSQLQFLRRLGQYIDVLILHYN 298 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLF---RDSENAGQLFNSDGEQDVGNPL 299 P + YW D DP + + + D N L + ++ +PL Sbjct: 299 PSQEYWADSVDPLWKQRYDLGVKERFIAKNPQATDAEIADFFNKFTLNFNAEARESRHPL 358 Query: 300 LASWGKLGRDYIYLLSDLESSQE---LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 L GK RD+ LLS+L + +E +DAFVD P++LL +QSDIL L + Sbjct: 359 LTRLGKQARDHFSLLSNLSTGEEGKWVDAFVDDFPESLLGKVQSDILHLVEPQAKQYELA 418 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE--DPTLTPRDIIVMVAD 414 P D SI HVCHS R++EVL ++L+ L + + P DI+V+V + Sbjct: 419 ------------PNDDSIQIHVCHSTLRQLEVLKEQLIGWLAKPHEQPRRPNDILVLVPN 466 Query: 415 IDSYSPFIQAVFGSAPADR--YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 + P I++VF + ++ +LP I+ + + A I + L RF ++ Sbjct: 467 LAEVEPLIRSVFPATATEQGVHLPVKIAGIASLDALNAWRAVIGRIHLMQGRFSFDEFAD 526 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG--QHTWRFGLTR 530 L + R+ + + + + ++G + G+D ++++ +++++F L R Sbjct: 527 WLGLHATQQRYALEYAQVERILNLLADAGFKRGLDAEHLKRSLCDGDDDYRYSFKFALER 586 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL-----AQERPLE 585 + LG A+ + VL Y + EL+G L + LN R L + +E Sbjct: 587 LALGIAIPEHAT-FNQVLSYAKVQPGDFELIGTLIQIYQDLNERRDWLIMHEQKKSHTVE 645 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD-------AVPLSLLR 638 WL + F I ++ + ++ + +PL + Sbjct: 646 YWLQTLSQDIIEFEQAGVTALKTAREIVKKQERMLTLASYYAETETGTLRKITLPLPYIL 705 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM- 697 DE+ + L+ + +Q G + + +R +P++++ +L ++ G +P + + FDLM Sbjct: 706 DEIQRTLENQT-AQAEPTGQITFAQIGQIRPLPYRLIVMLNLDAGQFPNRDTHVPFDLMD 764 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 + + + GDRSR +DD+ FL+AL+ AQ+ L++ Y G + D R PS ++QE +++ Sbjct: 765 ALRQQLGDRSRLEDDQGAFLDALLLAQENLWLFYNGFDVNDGEVRDPSSILQEFREHLAL 824 Query: 758 SHYLPGDEALNCDESEARV---KAHLTCLHTRMPFDPQNYQPGERQ-SYAREWLPAASQA 813 + + L LH PFDP+ + R Y W A Q Sbjct: 825 IVKPEPNAPDREVIEGIEIPTQLKQLYHLHYLQPFDPKGFMAENRYIRYQDHWFNVAMQI 884 Query: 814 GKAHSEFVQ----PLPFTLPETVPLE--TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 +A P +P+ + L+ + P R + + L V S + Sbjct: 885 QQASGVLKPWANISYPLEIPDMLVLDSHQWIQDVTFPARLYLK-TLGVENLGNVSVLDQN 943 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 EP +L+GL RY I L +Q E L + LP G W+ E + L Sbjct: 944 EPLLLDGLGRYTIRH-FLQQNEQQAQPEVLLDQ------LPVGKVQYSAWQQGIFEQECL 996 Query: 928 ADRVIACRQP--GQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL 985 +R+ + + + + +P+ + + S + ++WLE+L Sbjct: 997 LERLHHYAPAVTQTTQRVWRIAKQLHMNITVPKSETQDWVSMEASSARAKRRAKVWLEYL 1056 Query: 986 VYCA-----SGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSA 1033 ++ A S G R+ + D +++EQA YL + +R Sbjct: 1057 LWLAYLNEGSAGTERRRIVVFSDQTVICKGISSEQARQYLQPWFKIWRYAQQQ 1109 >UniRef50_Q6FF17 Exonuclease V, gamma chain n=3 Tax=Acinetobacter RepID=Q6FF17_ACIAD Length = 1221 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 263/1241 (21%), Positives = 496/1241 (39%), Gaps = 149/1241 (12%) Query: 2 LRVYHSNRLDVLEALMEFIVER--ERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 + V S R+DVL + V + + D + +V S + QWL LS+ GI AN Sbjct: 3 IHVIQSQRIDVLLQGVWQSVHQPTRQPFDVLATQHFIVPSPAVEQWLTEKLSELQGITAN 62 Query: 60 IDFPL-PASFIWDMFVRVLPEIPKE---SAFNKQSMSWKLMTLLPQLL---------ERE 106 F F W + +VL E + + + + W++ L + + Sbjct: 63 YLFHQRIRGFQWYAYQQVLSEHKDDVRKANIPRLILKWRVYQALYDFIQPDQILITQDHP 122 Query: 107 DFTLLRHYLTDDSD------------KRKLFQLSSKAADLFDQYLVYRPD---------- 144 ++++ + D +D ++ L+ ++ + + LF Y++YR Sbjct: 123 AYSIIAR-IYDSADRLENGFEKQLKKQKMLYWVAEQVSQLFSNYMIYRGHCQKNCAGNCG 181 Query: 145 ----WLAQWETGHLVE------------------GLGEAQAWQAPLWKALVEYTHQLGQP 182 WL+ W ++ E +AWQ LW Y HQ Sbjct: 182 CASNWLSAWGENRELDIEQLIVQGNKEISAFQLQQAQELEAWQRWLWHR---YFHQDFLD 238 Query: 183 RWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTN 242 + +L+ + +E ++ LP ++ + + LPP LQ L+ LG+++++ +L N Sbjct: 239 IQNIDDLFWQVLEQPQTRDIALKRLPKQIVMFTLLDLPPSQLQFLRRLGQYLDVLILHYN 298 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQ---LFNSDGEQDVGNPL 299 P + YW D DP + + R ++ E D + L + ++ +PL Sbjct: 299 PSQEYWADSVDPLWKQRYDVRVKQRFIEKNPAATDVDIAQFFEQFTLHFNAEARESRHPL 358 Query: 300 LASWGKLGRDYIYLLSDLESSQE---LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 L GK RD+ LL++L + +E +DAFVD PD LL +QSDIL L Sbjct: 359 LTRLGKQARDHFSLLANLSTGEEGRWVDAFVDDFPDTLLGQVQSDILNLAEPQA------ 412 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT---LTPRDIIVMVA 413 + L+P D SI FHVCHS R++EVL D+L+ L ++ P DI+V+V Sbjct: 413 ------GRYTLEPSDESIRFHVCHSSLRQLEVLRDQLIHWLSQNDDASVRRPNDILVVVP 466 Query: 414 DIDSYSPFIQAVFGSAPAD--RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 +I P I++VF + P+D +LP IS A + ++L R +D Sbjct: 467 NIKEIEPLIRSVFPATPSDDGVFLPIKISGVVQLDVMNAWRAVLGRMTLLQGRLSYDDFA 526 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL--PATGQHTWRFGLT 529 L +P +D+ + ++ + + +G + G D ++++ +++++F L Sbjct: 527 DWLSLPATQVCYDLEDSQIKRMLALLAGAGFKRGFDIHHLQQSLSAEDHDDRYSFKFALD 586 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL-----AQERPL 584 R+ LG A+ +Q VL Y + EL+G L + ++ R + + + Sbjct: 587 RLALGIAIP-EHTLFQGVLSYSGVTPDDFELIGKLIQIYQDIDARRNWVLAHEQGTQHSV 645 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII-------AEGLGAQYGDAVPLSLL 637 E+WL + + F I ++ + ++ + A+PL + Sbjct: 646 EDWLKILMQDVIEFEQAGVVALKTAREIIKKQERMVTLASFYADKDAHTLRQIALPLPYI 705 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 DE+ + L+ + +Q G + + +R +P+++V +L ++ G +P + + + FDLM Sbjct: 706 LDEIQRTLEHQS-AQAEPTGQITFSQIGQIRPLPYRLVVMLNLDTGRFPNRDSHIPFDLM 764 Query: 698 -SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 + + + GDRSR +DD+ FL+A++ AQQ L++ Y G + D R PS ++QE D++ Sbjct: 765 DALRQQLGDRSRLEDDQGAFLDAVLLAQQALWLFYNGFDLNDGEVREPSSILQEFRDHLA 824 Query: 757 QSHYLPGDEALNCDESEARVKAH--------------LTCLHTRMPFDPQNYQPGERQ-S 801 A + D + L C+H PFDP + Sbjct: 825 LIVAPAEQIAKHEDSNLTIQMQQQQFKLLDIPNQLWPLYCVHPLQPFDPLGFGNLPVAKR 884 Query: 802 YAREWLPAASQAGKAHSEFVQPL------PFTLPETVPLETLQRFWAHPVRAFFQMRLQV 855 Y +W A +A + + P + + P R + + L V Sbjct: 885 YQDQWYQVAQSIQEASAILQPWVNMVYTQPQQELRVLDSQQWMADVTFPARLYLKN-LGV 943 Query: 856 NFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEI 915 + + EP L+GL RY I L + + L + LP G Sbjct: 944 ENLAMTTLLDQNEPLFLDGLGRYAIRN-FLQKQEQTTTPDTLLDQ------LPVGKIKHS 996 Query: 916 FWETQCQEMQQLADRVIACRQPG--QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLS 973 W+ E ++L +R+ + + + + +P+ + S Sbjct: 997 AWQQSLAEQERLLERLHHYTTQPTATTHHVWRVSKTLHLNIIMPEHDVQDWVSLEASSAR 1056 Query: 974 VAQGMQLWLEHLVYCAS-----GGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYR 1028 + ++WLE+L++ + G R+ + D +++ QA YL+Q ++ ++ Sbjct: 1057 AKRIAKVWLEYLLWLSYLNEGDAGQRRRRIVVFSDQTVICEGVSSIQARDYLTQWLKMWQ 1116 Query: 1029 EGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMV----RGE 1084 + P+++ L+ D ++K L+ ++ + Sbjct: 1117 VASTQPVVLPAALILQPLEKAKQYHWVQQSDQFQLVEKDLLNILKEWQDPKAYMQIDTSQ 1176 Query: 1085 GDDIWYQRLW------RQLTPETMEAIVEQSQRFLLPLFRF 1119 + Y W + T +A+ S P+F++ Sbjct: 1177 LESSQYHLDWSFILQQQDATALLKDALQRYSYDLYAPIFQY 1217 >UniRef50_D0SSR5 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SSR5_ACILW Length = 1234 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 282/1259 (22%), Positives = 492/1259 (39%), Gaps = 169/1259 (13%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFE---PEMILVQSTGMAQWLQMTLSQKFGIAA 58 + V S R+DVL M IV + +PFE +V S + WL +++K GI+A Sbjct: 3 IHVIQSQRIDVLLDSMLRIVNQT-ARNPFEVLQTRHFIVPSPAVETWLTQKIAEKKGISA 61 Query: 59 NIDFPL-PASFIWDMFVRVLP-----EIPKESAFNKQSMSWKLMTLLPQLL--------- 103 N F +F W + VL E +E+ + + W++ L + + Sbjct: 62 NTQFHHRIRAFQWTSYQWVLNAPKEVEQVREANIPRIIIKWRVFQALRKCILPEQIPLDV 121 Query: 104 EREDFTLLRHYLTDDSD------------KRKLFQLSSKAADLFDQYLVYR--------- 142 + +++++ + D +D + L+ ++ + + LF Y+ YR Sbjct: 122 DHPLYSIVKR-IYDSADRLEQGTEKQLKKQSMLYWVAEQVSRLFSHYMDYRGYCARNCPP 180 Query: 143 ------PDWLAQWETGHLVE------------------------GLGEAQAWQAPLWKAL 172 +WL W ++ E +AWQ LW+ + Sbjct: 181 NNCSCPSNWLEAWGQDIALDIEQMIYSPKDENGHEMQVADFVKIQARELEAWQRWLWQHV 240 Query: 173 VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGK 232 + LY +E E+ LP+++ + + LPP L L+ L + Sbjct: 241 FQD---DYAKILEIERLYWDRLENAETRAQALKRLPAQIVVFSLLELPPSQLDFLRRLSQ 297 Query: 233 HIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG-------Q 285 +I+I++ NP + YW D DP + A+ ++ + E R +A Q Sbjct: 298 YIDIYIFHFNPSQEYWADSVDPDWKARFDLQREERFIQRFEKTRQRKPNDAEIKDFRIKQ 357 Query: 286 LFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE---LDAFVDVTPDNLLHNIQSDI 342 L + +++ +PLL +GK RD+ LLS L S +E D FVD D LL IQSDI Sbjct: 358 LNFNAEDRESRHPLLTRFGKQARDHFSLLSKLSSGEEGLWADVFVDEYQDRLLAKIQSDI 417 Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP- 401 L L ++ L P D S+ HVCHS R++EVL ++L+ L + Sbjct: 418 LYL------------LEPEQHQYALSPDDDSVQIHVCHSSLRQLEVLKEQLIHWLAQGNE 465 Query: 402 --TLTPRDIIVMVADIDSYSPFIQAVFGSAPADR------------YLPYAISDRRARQS 447 P DI+V+ + P I++VF P +R YLP I+ Sbjct: 466 EAPRQPSDILVLTPSLKELEPAIRSVFAPPPRERETGSKRLQKDNLYLPIQIAGVSRLDV 525 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID 507 A + + RF ED L + R+ + + + Q + ++G + G+D Sbjct: 526 SNAWRAVLGRIQWVRRRFSIEDFADWLSLNATQQRYGLDYSQVERMLQLLTDAGFKRGLD 585 Query: 508 DDNVRELELPATG--QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 ++++ + +++F L R+ LG A+ +Q L Y + L+ L Sbjct: 586 QQHLQQSLSAGDEDYRFSFKFALDRLALGLAIP-EHTLFQDTLSYAKVLTSDFPLISTLI 644 Query: 566 SLLMQLNIWRRGL-----AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 + L R L Q P++ WL R LN F E+ + I + ++ Sbjct: 645 RIYQDLVERRDWLTLHETGQRTPVKTWLEYLRADLNEFRDAGVESLKTVAEIIDKQMRML 704 Query: 621 AEGLGAQYGDA----------VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 D +PL + +E+ L+ ++ Q G + + +R + Sbjct: 705 TLADYHDQDDPHASQELVALSLPLPYVLEEIQNTLE-MQLDQAEPTGQITFSQIGQIRPL 763 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLM-SQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 P+K+V +L ++ G +P + + FDLM S KP+ GDRSR DD++ FL+AL+ AQ+ L++ Sbjct: 764 PYKLVVMLNLDSGKFPSRNQQVPFDLMRSLKPQLGDRSRLDDEQGAFLDALLLAQENLWL 823 Query: 730 SYIGRSIQDNSERFPSVLVQELIDYIG---QSHYLPGDEALNCDESEARVKAH---LTCL 783 Y G ++D R PS +QEL+ +I QS + D V H L + Sbjct: 824 FYNGFDLEDGEARDPSTALQELVQHIALICQSEQPDAEIDPMVDIHGLSVAQHIRQLYHV 883 Query: 784 HTRMPFDPQNYQPGERQSYAREWLPAAS----QAGKAHSEFVQPLPFTLPETVPL---ET 836 H PFDP + + Y +W A GK S P + + + + Sbjct: 884 HPLQPFDPAGFADMQTPRYQDQWFAVAEYIRSAEGKRSSWINAHYPALEQKEIRVLKGDE 943 Query: 837 LQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER 896 R P R F + V+ EP +L L +YQ+ LL E + Sbjct: 944 WIRDMIFPARLFLKSV-GVSTIRYADLPSSREPLLLNKLEQYQVRDFLLQQEQEIEPNLM 1002 Query: 897 LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLA--CNGVQITG 954 L R LP G + W QE Q L +R++ + + + I Sbjct: 1003 LDR-------LPVGKTQQATWLGSQQEQQLLQERLLQLGKELTPVTQQSWQFSPELIIHI 1055 Query: 955 WLPQVQPDG-LLRWRPSLLSVAQGMQLWLEHLVYCA-----SGGNGESRLFLRKDGEWRF 1008 +PQV L + S S + Q+WLE+L++ A + R+ + + +F Sbjct: 1056 NVPQVPNSSYWLSMQSSSASEKRRAQIWLEYLLWLAYLNDDARSPELERIVIFSNKTLKF 1115 Query: 1009 PPLAAEQALHYLSQLIEGYREGMSAPLLVLP----ESGGAWLKTCYDAQNDAMLDDDSTL 1064 L++ +A YL ++ + G PL++ + W + + + + L Sbjct: 1116 SGLSSSKAHEYLQLWLKAWEIGQQQPLVLPAELLMKKEWQWAENEHGK---MTIVEMPEL 1172 Query: 1065 QKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETM--EAIVEQSQRFLLPLFRFNQ 1121 KA ++ + +Q + + P+ + + P+ + + Sbjct: 1173 LKAWNNSYESAKPLASDESSLLHQDWQFILQDQDPDLALQNCCHDFAHGLYAPIHQHLE 1231 >UniRef50_A5GU99 Exodeoxyribonuclease V gamma chain n=1 Tax=Synechococcus sp. RCC307 RepID=A5GU99_SYNR3 Length = 1071 Score = 571 bits (1472), Expect = e-161, Method: Composition-based stats. Identities = 262/1158 (22%), Positives = 446/1158 (38%), Gaps = 140/1158 (12%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 MLR+ SN ++ L + ++R + +P P+ +L+ + M++WL + LS++ GI A I Sbjct: 1 MLRLISSNSIEDLATALASELDRHKPANPLTPQRVLISTNAMSRWLALALSERIGICAGI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPK--ESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 +F + + + + +P ++ + W+L L+P L + E + L+ Sbjct: 61 EFDFAGRHLRQLILELDGRLPAGHRDPWDPSQLRWQLAQLIPALPQTELWEPLQQLWHQG 120 Query: 119 SDKR------KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVE----GLGEAQAWQAPL 168 ++ + QL + +D DQY +YRP + +W G V+ L Q WQ L Sbjct: 121 PQQQDNGLDTQRLQLILQLSDTLDQYGLYRPQMVRRWLNGESVDGSHAPLAAHQQWQPAL 180 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQAL- 227 + L + G P H A +E + L + G+S+LPP + L Sbjct: 181 LRELAQRLEPSGIP--HPAERLLHALEQSRQRSDPHEPL----HVFGLSSLPPALWKLLA 234 Query: 228 -QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 +A + + L +P WG LP E Sbjct: 235 QRASSRDSPVLLYQLSPSLDPWG-----------------------SLPPSHHEEGDALD 271 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLS-------DLESSQELDAFVDVTPDNLLHNIQ 339 G+PLLAS G+ RD+ + L + Q+ A + LL ++ Sbjct: 272 RLERRLLHQGHPLLASLGRTQRDFHWQLELIAADLQEQFERQQRPAPLCPEEAGLLQQLK 331 Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 +D+L R IE L ++ CH +R+VE H+ LL ++ Sbjct: 332 ADLLVGRPRGEGLPGIEP------PLKLQRNQLNLEVLACHGDRRQVEAAHEALLRLMAG 385 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAP---ADRYLPYAISDRRARQSHPVLEAFIS 456 DP++ PR I+VM D+ ++P + AVF R+LP ++DR RQ +P ++ Sbjct: 386 DPSIEPRHILVMTPDVARFTPLVLAVFERPGRSSDPRHLPVRVTDRTLRQRNPRVDLVFR 445 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 LL+L SR +DVL +L +P LA ++ R+ ++++GI WG D D+ + Sbjct: 446 LLALASSRLSRDDVLDVLLLPELAEHLELGGLTQPQWRELLDQAGICWGRDGDHRQSWGY 505 Query: 517 PATGQHTWRFGLTRMLLGYAMES-------AQGEWQSVLPYDESSGLIAELVGHLASLLM 569 PA +WR+GL R+LLG + A GEW + ++S +++ L Sbjct: 506 PAGDAFSWRWGLDRLLLGLELSDGFPEQEAASGEWGGLAACNQSLATANDVL-ALHDACS 564 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 +L + L+ P E W + D E + + + G Sbjct: 565 RLFEQLQALSGPLPAERWNEQIGSAIQQLSGGDDEG-WQAPEVYELLTPLRD---PEASG 620 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 A+ + + L + Q++ ++G V++ L PMRSIP +VV LLGM++ PR+ Sbjct: 621 LALDRAAVVRLLEEAEAQQQGRYGHVSGAVSLSALEPMRSIPHRVVVLLGMDEQRLPRRD 680 Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 G+DLM Q+P RGDR RR +DR + LEAL + +Y + ER P+ + Sbjct: 681 QRPGYDLMLQRPWRGDRDRRQEDRAILLEALQACSDHWIATYNAIDPRSGEERNPAAPLS 740 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 +L+ + +S+ E + + + Sbjct: 741 DLLRCLERSYRTEAGEPITTWVLQQQPPLPPLT--------------------------- 773 Query: 810 ASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 A + A Q P E LE LQ++ P RA Q ++ E D E Sbjct: 774 AREVVGAPWPMDQRWPVDECEPASLEELQQWLRDPARALLQAH-GIHPHRRGDESSDPEE 832 Query: 870 FILEGLSRYQINQQLLNALVEQDDAERLFRR---FRAAGDLPYGAFGEIFWETQCQEMQQ 926 +GL R+ + Q+LLN E+ +A + ++ G LP G + + Q Sbjct: 833 SAPDGLQRWTLGQRLLNLGSERLEANQWPQQRDALARRGHLPPGPAAIVSSDQPWQRCHA 892 Query: 927 LADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV 986 L + L + ++ S + + WLEHL Sbjct: 893 LLAK----------------------QAELQDADGEAVVLMSNSRFKPKRLLDGWLEHL- 929 Query: 987 YCASGGNGESRLFLR--------KDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVL 1038 A+ + L L + W P + A+QA ++ + E + P+ + Sbjct: 930 -WANAERPQQTLLLGPMEQKGEERAAVWTLPAVEAQQAKAWIDDWQQWREEALQRPIAWI 988 Query: 1039 PESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLT 1098 PE L D + + + + G+ Sbjct: 989 PELNWQLLSQQQDGSLPGLSAQQLKELNPPGRNDYEWPSAWLQLLGGEAPSIASWLEHPE 1048 Query: 1099 PETMEAIVEQSQRFLLPL 1116 E + S R+LLPL Sbjct: 1049 AE------QLSLRWLLPL 1060 >UniRef50_D1R7X4 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7X4_9CHLA Length = 1144 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 257/1212 (21%), Positives = 464/1212 (38%), Gaps = 182/1212 (15%) Query: 3 RVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDF 62 V+ SN++++L ++ + PF +I+V S M W+ ++++ GIA + Sbjct: 8 HVFFSNQVELLIHPLKQQLL---GAHPFCRRLIIVPSPAMKSWVMFKMAEESGIAMGFET 64 Query: 63 PLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLERED---------FTLLRH 113 I ++ + P + + ++ L + Q+L R + + L Sbjct: 65 IYLDQGIQRLYQLIEPNQTLANHPSSFELTLALEVEVRQILMRCESLSSEEHELWKPLFG 124 Query: 114 YLTDDSD--------KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQ 165 YL +++L L K A LF +Y + + L W +WQ Sbjct: 125 YLRFSPSIKTLSLKGEKRLISLVEKLAGLFLEYGIAGGEALEAWRQ-------APPSSWQ 177 Query: 166 APLWKALVE----YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPP 221 LWK + E Y ++ ++ ++ I+ L+ V + +S LP Sbjct: 178 VYLWKKIFERGNAYNWTYPYHYLNQISIPEKRIDQLQ------------VHLFAMSYLPA 225 Query: 222 VYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSE 281 +Y LQ + + I + +PC +W D ++ ++ + + Sbjct: 226 LYHNFLQKIAQAISVSFYLLSPCEAFWSDACSDKESKRMQRYWKKQDAPEAQQVAL---- 281 Query: 282 NAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLE-----------SSQELDAFVD-V 329 + NPLLA++G+LGR+ + D + + + + + Sbjct: 282 --------EELLRDKNPLLANFGRLGREMAVAVEDSNVRTSACYTLPARALDFPCYEESI 333 Query: 330 TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD--PLDSSITFHVCHSPQREVE 387 T D LLH+ SD L ++ F D+ PLD DS+I H S REV+ Sbjct: 334 TSDILLHS--SDRPYLTLLQAVQTDMVLFRNPDHTPPLDLSENDSTIQIHATPSLLREVQ 391 Query: 388 VLHDRLLAMLEEDP---TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 +LHD L+ ++ P L+P + +VM DI Y+PFI+ VF + + L Y + D Sbjct: 392 ILHDNLIRLIHNAPKENPLSPNEWVVMAPDIRIYAPFIKMVFSNPNSP--LDYKMMDAEL 449 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 + + +++F+ LL L SR+ + +L L D ++ + E + +R W+ E+GIRW Sbjct: 450 PEQNLYIQSFLHLLKLSSSRWDTVSLLTLFDYLPFRNKWGLHFEDIDQIRTWIKETGIRW 509 Query: 505 GIDDDNVR---------ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 G+D + + + TW G +L G +E Sbjct: 510 GMDIAHRQMILKQDHCAHTLVDENPAGTWEHGFQMLLKGLILEENDTILS-------VDI 562 Query: 556 LIAELVGHLASLLMQLNIWRRGLA--QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 + L+G ++ L+ L ER ++EW + + N + LP+ + +E Sbjct: 563 TQSTLLGKWIYIVRSLHQDLIPLNDGSERTIQEWGTYLQHLSNFYLLPELSEHQEL--LE 620 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPF 672 G ++ L +E +S R + V C+++PMR+IP Sbjct: 621 HLLHPFF---KGFLPQHTFSFKTIQPILLSLFKKEDVSYRETSLRAVKFCSMLPMRAIPA 677 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR-GDRSRRDDDRYLFLEALISAQQKLYISY 731 K + LLG+ +G +PR L L++ P+ S+ D DRYLFLE L SA++ L +SY Sbjct: 678 KGIALLGLEEGAFPRFLPESSLHLLAFHPQADYSPSQIDFDRYLFLETLTSAREYLLLSY 737 Query: 732 IGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 S E+ PS+LVQEL+ Y+ +S+ L H ++P Sbjct: 738 QAFS-STGKEQPPSLLVQELMSYLDKSYRLGDTCP----------SKRCFFKHPFHGYNP 786 Query: 792 QNYQPGERQSYAREWLPAASQAGKAHS-----------EFVQPLPFTLPETVPLETLQRF 840 Q + S+++E +A + K PL + + L Sbjct: 787 QYFDNSSLNSFSQENYRSALASLKTEKTSKHCFIPKFLSLRTPLCLEEEHILEIRQLIAL 846 Query: 841 WAHPVRAFFQMRLQVNFR-TEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFR 899 +P +F RL + E +IPD + F L LS+ + ++ L + + L Sbjct: 847 ARNPFEHYFNKRLGIYLEKEESRKIPDDDLFSLTSLSKASLKKEAL-----KHPLDALLT 901 Query: 900 RFRAAGDLPYGAFGEIFWETQCQEMQQ----LAD---------------------RVIAC 934 + G LP+G F + + +E++Q L + ++ Sbjct: 902 QNEIKGRLPFGYFKALSLDQLKKEIEQNKSLLLNCGIALDQIFQIELTDAVSEPTQIHPA 961 Query: 935 RQPGQSMEIDLACNG-VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN 993 +E+ + ++I G LP+V P GLL + + ++ W +L+ Sbjct: 962 CWLLPPLELTYQVDKRIKIVGILPEVTPQGLLAFI--RDEKKEVIKAWPAYLILNCLANV 1019 Query: 994 GE----SRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTC 1049 L K G + P +Q L ++ Y + +LPE W+ Sbjct: 1020 YPDMFGKHLIFAKSGSIKAPFF--DQPFTLLEHFLDYYFICQTHVSPLLPE----WIPDM 1073 Query: 1050 YDAQNDAMLDDDSTLQKARTKFLQAYEG--NMMVRGEGDDIWYQRLWRQLTPETMEAIVE 1107 + L +QK+ T Y N M RG+ D + + E Sbjct: 1074 IENPKSCQL----KIQKSLTGHFSLYNDYVNWMTRGDVDLDYVSLV---------SEWQE 1120 Query: 1108 QSQRFLLPLFRF 1119 + + P++ Sbjct: 1121 LATAYFSPIYTH 1132 >UniRef50_Q6MFB7 Putative exodeoxyribonuclease V gamma chain n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MFB7_PARUW Length = 1195 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 261/1161 (22%), Positives = 453/1161 (39%), Gaps = 171/1161 (14%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK--FGIAAN 59 L V+ SN+L +L ++ + + PF+ +++V M WL + ++Q GIAA Sbjct: 38 LEVFFSNQLSILYEQLKNNLFGFK-QTPFKKRLVIVYGPAMQTWLTLKMAQDPDLGIAAG 96 Query: 60 IDFPLPASFIWDMFVRV-LPEIPKESAFN-KQSMSWKLMTLLPQLL-----EREDFTLLR 112 I+F + L S ++ +L+T+L E++D+ L Sbjct: 97 IEFLYLNQAFETLIHYFQLKNEKIPSILELSLAIEKELLTVLQDYHRLSDEEQQDWLTLI 156 Query: 113 HYLTDDSDK------------RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGE 160 +YL +S + ++L LS A +F +Y Y +++WE E Sbjct: 157 YYLKLNSKQVGENLKLTRKMEKRLTGLSYHLAKIFQEYGKYAYSLVSKWEK-------SE 209 Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 + WQ+ LWK+L G W +A F +TL+ C V IS + Sbjct: 210 HRGWQSRLWKSLF--GGNQGWTYWTKA-----FQKTLKFFPECE------VHFFSISFIS 256 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 Q L L I+ +PC +W DI+ L T ++ Sbjct: 257 KAEFQFLSKLANVAPIYYYLLSPCAVFWSDIRSDNETRYLQTYWQQKL-----------G 305 Query: 281 ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE------------------ 322 A Q+ + NPLLA++GKLGR+ Y + + +++ Sbjct: 306 SKASQVLQLEELLRDRNPLLANFGKLGREMAYQIEESQATTHAGYILPSHVSELNDEIFF 365 Query: 323 -LDAFVD--VTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVC 379 D F+ + P LLH IQ+DIL + N + D SI H+ Sbjct: 366 QEDLFLKESLQPLTLLHAIQADILMMRNP-----------EGKPPFNFERKDDSIQLHIA 414 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 S +RE+++L+ LL + E+D TL P DIIVM I Y P+IQ+VFG + L + I Sbjct: 415 PSIRREIQILYHNLLKLFEKDSTLQPNDIIVMAPQISDYVPYIQSVFG--LEESQLDFQI 472 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 D + +++ F L+ L +SR+ ++L L + +T+ +++W+ + Sbjct: 473 LDLGMQAQSEIVQGFFQLIRLSESRWEVSELLQLFGHRLFQRCHQLTQSDYYLIQEWIQQ 532 Query: 500 SGIRWGIDDDNVRELE---------LPATGQHTWRF--GLTRMLLGYAMESAQGEWQSVL 548 +GIRWG D + EL + ++ TW F + L ++SA + Sbjct: 533 AGIRWGEDWLHRNELLQRHHCEKEMVDSSSVGTWNFGLTRLLLGLTTVVKSADSHSFDSI 592 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGL--AQERPLEEWLPVCRDMLNAFFLPDAETE 606 P + AEL+ LL L L + +EEW +L+ +F + E Sbjct: 593 PCEGIDFSQAELMERWIRLLHSLRDDLSPLHDRSQMCMEEWSCYLSCLLDTYFKCEFEDS 652 Query: 607 AAMTLIEQQWQA--IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-AGPVNICT 663 ++ E+ ++ + ++ L L Q I+ R + C+ Sbjct: 653 QSIADYEELKSQFKLLGDSAKTFKETKFSFQTIKFHLNNLLQQRGITYRESHLQTIRFCS 712 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR-GDRSRRDDDRYLFLEALIS 722 +MP+RSIP KV+ +LGM +G +PR +LM + + + D DRYLFLEAL S Sbjct: 713 MMPLRSIPAKVIAVLGMQEGAFPRAGYHTSLNLMVGQDNLDYNPNSTDYDRYLFLEALQS 772 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 +SY G + QD+ PS++++E Y+ + + + + + Sbjct: 773 VTDVFIVSYQGYTYQDSKVLQPSLIIEEFFTYLDKYYLIQNKK----------ISEQCVS 822 Query: 783 LHTRMPFDPQNYQPGE-RQSYAREWLPAASQAGKAHSEFVQ-----------PLPFTLPE 830 H FD ++P +Y++ A Q + H L LP Sbjct: 823 KHPFDAFDVSYFKPNSILNNYSQFDYRIAEQYYQTHKTPSHRLLKQFILSNYSLEDILPS 882 Query: 831 T--VPLETLQRFWAHPVRAFFQMRLQVNFR-TEDSEIPDTEPFILEGLSRYQINQQLLNA 887 + L+TL PV+ + L + ED I + E L L++YQ+ Q L Sbjct: 883 HTVIDLKTLNTLVRSPVKFYLNRGLDIYLEGYEDRIIKNQEELGLSALNKYQLKQFAL-- 940 Query: 888 LVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG--------- 938 ++ E++ + G LP G F + + E+ ++ R+ Sbjct: 941 ---KEPFEKVMQIADKEGKLPLGMFKTVATKRFKDEIDEVHQRLYKHGINPSELFQIEFC 997 Query: 939 ----------------QSMEIDLACN-GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW 981 +++++ + + I G LP V GL+ + + W Sbjct: 998 TSCSEPCQIQKDQWLLPALQLNYSDQYQISIIGKLPFVSKKGLVVLSQGSG-FSDAWKAW 1056 Query: 982 LEHLVYCASG----GNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLV 1037 + L++ + E L L K E + + ++ YL LI Y M + Sbjct: 1057 PQFLLFNYATTFNIEAIERNLILSKSSEVK--KAFFKDSIPYLKHLINYYALSMRNFSPL 1114 Query: 1038 LPESGGAWLKTCYDAQNDAML 1058 P+ W+ + + A+ Sbjct: 1115 FPD----WIPSLIEGDEQAIQ 1131 >UniRef50_A2BX92 Possible exodeoxyribonuclease V subunit C 125 kD polypeptide n=7 Tax=Prochlorococcus marinus RepID=A2BX92_PROM5 Length = 1060 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 176/1152 (15%), Positives = 409/1152 (35%), Gaps = 131/1152 (11%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPE--MILVQSTGMAQWLQMTLSQKFGIAA 58 ML +Y+SN+++V+ L+ + P E I V + + +WL ++ I+A Sbjct: 1 MLNIYNSNKIEVISQLLAKELIISP---PLITEKLDIAVPNYFLGKWLWNEITVSNQISA 57 Query: 59 NIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 + +++ + + PEI +N +S+ W ++ +L ++ +R+++ Sbjct: 58 LYELKTISNYTETLLTNLFPEI-DMGVWNFESIKWGIIDSFEELDSYKESLPIRNWINKF 116 Query: 119 SDKRKL-----FQLSSKAADLFDQYLVYRPDWLAQW-----ETGHLVEGLGEAQAWQAPL 168 + +K+ + L+ K A+ F YL++RP+ ++ W + +L L + WQ L Sbjct: 117 LNNKKIIDGDIYNLTKKIANNFIDYLIFRPEMISNWHKYDLNSQNLFNNLNSNEYWQPIL 176 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQ 228 +K L Q P I+ ++ +P ++I + L +++ Sbjct: 177 FKLL-----QKKMPEKPSCLYMIEVIKNIKKLQNYKNKIPKCIYIISDNNLSRLHVDFYS 231 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 L + +++L + W I F EN L N Sbjct: 232 KLAEFTKVNLYLLSVGDNLWNRINS-----------------IEGEVDFGGIENKLYLNN 274 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDA-----FVDVTPDNLLHNIQSDIL 343 + E +GK G +Y L+ + + ++++ ++D T ++ I Sbjct: 275 ASIEGI--------FGKFGANYQKLIEETSNIEDINLNTKSIYIDPTINSSRKKDVPLIN 326 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 +++ R ++ D SI F + ++E + ++++ +LE + Sbjct: 327 QIQKR--------LIDNKKYDFIINERDDSIIFRGHFNQLSQLEFVRNKIIEILETCEEI 378 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPAD-RYLPYAISDRRARQSHPVLEAFISLLSLPD 462 DI ++ PF++ +F + + + LPY + S + +++ L Sbjct: 379 KYSDIAIVSPQTGLIKPFLKYIFNNELINGQKLPYFFIEGDYEDSSNIYNFLLNITQLAG 438 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + E + L F+ + + +N+ G WG+D + ++ Sbjct: 439 EKITLEKIEYFLSQDFTQNIFNFDMKEKEEIILLLNQVGFHWGLDSNERL-----GEEKN 493 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 + + + R++LG + + L + + + +L++L + L Sbjct: 494 SLEWCINRIILGLIYDKEFNFINNNLKSFSPKNISLD-LNKWVKILIKLKEYINLLRGSF 552 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 W+ + +LN + + I ++ + + Q + L++ R+ L Sbjct: 553 SYSVWVKKIKYILND---VNDFHQNFYLEICDLYRVMNNYSISYQSDQIIVLNVFREILI 609 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 ++ + + + + +R IP + L+ MN+ YPR +++++K Sbjct: 610 SCINNSKYKNESYINKILVSDIEKIRLIPRNTIFLINMNNVYYPRLTIKENINILNKKYS 669 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 GD S D ++Y FLE LIS +++L +S++ +DN + S ++ELI+Y + Sbjct: 670 LGDPSVFDREKYFFLELLISCRKQLIVSWVNND-KDNKKLDISYPIKELINYFESFLTIK 728 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQ 822 +++ +D Q + E ++ + + + Sbjct: 729 QRKSIIKYFD----------------YDKQQFSKTEENTFTSHYTLIDKIDWEEKKFDCK 772 Query: 823 PLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 L L ++ P + ++ + PD E + Q+ Sbjct: 773 NFK--------LSELIYWFKTPQLYWLNKN-NISPKGIFIHHPDDEYVT--NFQKSQLVN 821 Query: 883 QLLNAL-------VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR 935 L+ + +++ + +F G + A + + + + + Sbjct: 822 NLIQKIEIDNHNCIDELKNLNIREQFIENGII---APKKSIFSKEKEIKDLVLSLATNLS 878 Query: 936 QPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGE 995 Q + N ++ ++ L+ S L++ + + W++ L + Sbjct: 879 QNNNIDRTYIKSNSNKLEYFIAGEVVIELIH---SKLTLKRLSEAWIKLLFISSLDKKIA 935 Query: 996 SRLFLRKDGEWR----FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYD 1051 + + A L + I ++ L + PES +++ Sbjct: 936 KTKVIFRKENLYKSEILQSPDPYYARKILEEYINIFKNFSEKCLPLPPESTYKYVEAKMQ 995 Query: 1052 AQNDAMLDDDSTLQKARTKFLQAYEGNM-MVRGEGDDIWYQRLWRQLTPETM----EAIV 1106 ++N+ F + GN +GE D+ Q + + Sbjct: 996 SKNEK------------KAFSDRWIGNKSFTKGERDNTEIQLCFGNKKEPNFFFENDKFD 1043 Query: 1107 EQSQRFLLPLFR 1118 + S R PLF Sbjct: 1044 DLSLRLYAPLFE 1055 >UniRef50_A5EWC3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EWC3_DICNV Length = 1090 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 254/1180 (21%), Positives = 445/1180 (37%), Gaps = 160/1180 (13%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M R+ + L L + DD F I+V S +A +L+ +++K GI+ Sbjct: 1 MFRITQATDLAHLMPDFLTALHDYP-DDIFAETEIVVPSMAIADYLEHHIAEKMGISCRH 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLP----QLLEREDF--TLLRHY 114 + W + R+ ++ + ++ W+L + L ++L ED L HY Sbjct: 60 RYRFWGEMEWTIIERLSNRSAAQTPLSTTAIHWQLFSWLYAHRAEILADEDHVLAPLLHY 119 Query: 115 L------TDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL------VEGLGEAQ 162 L D+ +L+Q S + A LF YL RPDWL W+ + L E Sbjct: 120 LLAPSSARDEQTLPRLWQFSGEQAQLFTHYLKMRPDWLLTWQQKPDCHLEDIIATLPEMP 179 Query: 163 AW-----------QAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRV 211 W Q LW+ L HR ++F L P LP+R+ Sbjct: 180 TWLRQHYDGVFTVQKYLWQQLFAE------AMEHRQQRIEQFYHRLSVDDALPA-LPARL 232 Query: 212 FICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFED 271 F+ +L L LQA G+ E+HL Y+ DI D + Sbjct: 233 FVFHPFSLTDHMLHWLQAFGQRCEVHLWLALVSNGYFPDIVDERWRQ------------- 279 Query: 272 RELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSD---LESSQELDAF-V 327 N+D G+ L++ +GK RD L LE Q + Sbjct: 280 -------------SHTNADEHFRSGHVLVSRFGKQQRDIFRLCQSHNLLEEIQHITPHSA 326 Query: 328 DVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVE 387 D +LL +Q+D+ L++++ S PL P D SI H CH R++E Sbjct: 327 DTAQQSLLQRLQADMRALDDQS-----------SLTAAPLVPNDDSIRIHGCHGLLRQLE 375 Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP--ADRYLPYAISDRRAR 445 +L + L+ L D T DI++++ +++S I+ VF ++ LP ++ Sbjct: 376 LLREELVRWLNADETRQLSDILIVLPELESVQDVIRTVFPASGDYDGAVLPARLTGIIDS 435 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 + + +A + L + F L + + + I ++ ++ + +G G Sbjct: 436 SAQRLWQAISGIYVLATTPFNRHTFLQWVLQEEVCTAYGIADKAMQRTCDQLIAAGFYRG 495 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 + ++ + + T + L R+L G AM A ++++P A + LA Sbjct: 496 FEQQDLETV-ADGDARFTLSYALERLLSGLAMPQADIWLENIVPEHNIRNDDAAALAVLA 554 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA---- 621 + Q++ R + WL R L F +T AA LI Q + Sbjct: 555 QIHQQISTIRVQQKNHTTAQFWLDELRQRLEHDFSAF-QTTAAWQLIAQTLTELTEKLQA 613 Query: 622 --EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 + A +PL + + + ++L +++ +G + I + MR++P++++ +G Sbjct: 614 HHQLTAAAADLYLPLPFILNYIGEQLSTRQVASEP-SGVITIGRIGAMRALPYRLIAFVG 672 Query: 680 MNDGVYPRQLAPLGFDLMS-QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 + +P ++A +L++ P+ GD R D+ FL AL SA + Y D Sbjct: 673 ADQEQFPHRIAEQRHNLLTIDAPRLGDYHREHDELGSFLHALSSAGSHFWCFYTAVDPND 732 Query: 739 NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE 798 + ER P+ VQEL+DY+ Q+ H H PF + Y+ Sbjct: 733 HEERLPAAPVQELLDYLAQNGV--------------DQYLHYHLRHQPNPFHREPYRTAP 778 Query: 799 RQSYAREWLPAASQAGKAHSEFVQPLPFTL-------PETVPLETLQRFWAHPVRAFFQM 851 A W ++ + + LP + +T+ L + R P R F + Sbjct: 779 ----APLWQKVQHHLQQSAPDVLPFLPESETFTVNQAEKTMLLSQIARDLLKPARTFLRA 834 Query: 852 RLQVNFRTEDSEIPDTEPFIL----EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDL 907 +++ D EP + +GL R+QI Q LLN F+ L Sbjct: 835 H-KIDCSVTDVATDILEPLVFDAQSDGLKRWQIYQALLNDSPH----------FQYLPFL 883 Query: 908 PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL---ACNGVQITGWLPQVQPDGL 964 P GA G + Q Q ++ ++ C ++ + L + + QI+ LP V+ + Sbjct: 884 PAGAAGHHYHLLQNQRIEAQRAQLFECTGERENTPLQLKTVSFSNGQISADLPAVEVNKW 943 Query: 965 LRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDG---EWRFPPLAAEQALHYLS 1021 + SV WL +L++C G GE L + +RF PL E A L Sbjct: 944 VSLSARRYSVRSIFSEWLHYLLWCVQTGGGERWLSFAEKEMSVVYRFLPLECETAERELK 1003 Query: 1022 QLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMV 1081 + + + + L + E + +KA ++L + Sbjct: 1004 NWLAIWSR-LDSILGMPLEIAWEIAVAQKEKNP----------EKAVEQWLNKEIYDD-- 1050 Query: 1082 RGEGDDIWYQRLWRQLTPETMEAIVEQSQRF--LLPLFRF 1119 + ++Q L R + +R+ PLF F Sbjct: 1051 ----EKEYWQLLLRGQNSTEL-----LLKRWHEYQPLFAF 1081 >UniRef50_D0LXX8 Exodeoxyribonuclease V n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LXX8_HALO1 Length = 1274 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 234/1106 (21%), Positives = 399/1106 (36%), Gaps = 133/1106 (12%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDD----PFEPEMILVQSTGMAQWLQMTLSQKFGI 56 MLR+ +SN + L + + ER P I+V + + ++++ ++ + G+ Sbjct: 1 MLRLTYSNHFEELCRALCQELAAERRRRRQLLP-ATAHIVVPNHHITAYVKLAVANQLGV 59 Query: 57 AANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQ--LLEREDFTLLRHY 114 AAN+DF +SFI + V E + + L+++L LL ++ + Y Sbjct: 60 AANLDFRFISSFIAEC---VPDERRDLRVLDTPHLHALLLSVLADEALLAEDELAPVAAY 116 Query: 115 L-----TDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGL--GEAQAWQAP 167 L D+ + FQL+ + A LF Y + R D L W G + + WQ Sbjct: 117 LGAAGGEQDAVDLRRFQLAQQLATLFSDYRLSRGDLLRAWREGPALGDTRSAATEIWQRR 176 Query: 168 LWKALVEYTHQLGQPRWHRANLYQ-RFIETLESATTCPPGLPSRVFICGISALPPVYLQA 226 LW A+ + L ++ E + +P V + G S LP + + Sbjct: 177 LWLAIFDAERGLLARIREETGVHWVHGPELFDEYLIKDLAVPRSVHLIGFSYLPWAHHKV 236 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 L+ L + I +H+ NPC +W D++ + +L RQ + D F D ++ Sbjct: 237 LERLSRFISVHVYAFNPCMEFWEDLRAG-WETRLAGRQLKSRKGDAVQLSFEDLDD---- 291 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV----------------- 329 P L WG+ GR+ + +L + FVD Sbjct: 292 ----------TPALRLWGRPGRENVRILDEQTQCDFDARFVDPAAPEAEDAAAADAADAA 341 Query: 330 ------------------------TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKR 365 P +LL +Q DIL AG + + Sbjct: 342 SSAESQAAAPDLFAGLGLGAAAAEPPVSLLAALQRDILFRHPARRAG--------APDAP 393 Query: 366 PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA--DIDSYSPFIQ 423 L D S+ C S QRE+E++ + + +++ DP L DI ++V D + Y + Sbjct: 394 ALVAGDRSVQILGCPSIQRELEIIGNEIWSLMARDPGLRFNDIALLVGRADQELYQAHVP 453 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 VF +PY +D ++EA LL LP RF ++L LL P + AR+ Sbjct: 454 GVFAEL---HGIPYHFADAAVTGESRMVEALGLLLDLPFGRFTRPELLRLLTHPAVLARY 510 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 + W GI G D + + W+ G+ R+ LG M + Sbjct: 511 P--DVDPDDWVHWSERLGIVHGADTRDHAATYI-ERDLFNWQQGIRRLALGAFMAGERSG 567 Query: 544 WQSVLPYDES----SGLIAELVGHLASLL----MQLNIWRRGLAQERPLEEWLPVCRDML 595 D S L A+L+ A + R E+PL W M+ Sbjct: 568 ELRPFAMDGSAYLPEELPADLLPSAARFALVARSLIADARYCQQAEKPLARWRIFFDLMV 627 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI-SQRF 654 +++ P + + + +AI G V + + L RL + R Sbjct: 628 DSYLAPQNDEDE--RNLAACREAIATLAGSDIDGRPVRYRIACELLRARLGKLRGERGEL 685 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 LA V + L+PMR IP++VV L G+ +G +P DL + K +RGD S R+ DRY Sbjct: 686 LAHGVTVAPLLPMRPIPYRVVFLAGLGEGHFPASERESPLDLRAAKRRRGDVSPRERDRY 745 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 LFLE L+SA+++LY+SY+ R + PS +V EL D++ +S Y E + Sbjct: 746 LFLETLLSARERLYLSYVSRDERTGETLQPSPVVLEL-DHLVRSGYTGEGEGTS------ 798 Query: 775 RVKAHLTCLHTRMPFDPQNYQ---PGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET 831 + H +DP+ + +S R A + A + Sbjct: 799 -----IAIDHPLRRYDPRYFPALFATIGKSDDRSKSAAPAPTPAATATISDADADAAAGY 853 Query: 832 VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF--ILEGLSRYQINQQLLNALV 889 + + R + L+ R +P L G + ++L + Sbjct: 854 LSVAPAAR--RQAHVLALRRHLEHTLREHGHGMPSVGELRHALSGPRHAALRERLGWTAL 911 Query: 890 EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG 949 E A A+ G+ + ++ R + + + L Sbjct: 912 EAATAPPPRVELAASPTNENREPGDGAADEVVPISLRMLRRFLETPLQAWAAAV-LRLRE 970 Query: 950 VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWR-- 1007 ++ + Q P + ++ EHL A S + + Sbjct: 971 SELDDPVAQADESFSTPVAPMVGLLSDVFG---EHLSAGAPSLEALSERYAERAQYLELT 1027 Query: 1008 -------FPPLAAEQALHYLSQLIEG 1026 F + +E+ L L + Sbjct: 1028 GRSPTGVFSDIDSERHLAILQRWQAH 1053 Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 74/248 (29%), Gaps = 55/248 (22%) Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILE-----GLSRYQINQQL 884 + L L+RF P++A+ L++ D + E F GL + L Sbjct: 944 PISLRMLRRFLETPLQAWAAAVLRLRESELDDPVAQADESFSTPVAPMVGLLSDVFGEHL 1003 Query: 885 ------LNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG 938 L AL E+ + G P G F +I E +Q+ + Sbjct: 1004 SAGAPSLEALSER--YAERAQYLELTGRSPTGVFSDIDSERHLAILQRWQAHIETLAPGP 1061 Query: 939 QSMEIDLACNG-------------------------------VQITGWLPQVQPD----G 963 + L+ V++ G V D Sbjct: 1062 REPASVLSFGRAPETRDAGLLLPPLALPISLPDGEGGQRVVRVELVGSTSPVFADPALGA 1121 Query: 964 LLRWRPSLLSVAQGMQLWLEHLVYCASG--GNGESRLFLRKDGE----WRFPPLAAEQAL 1017 ++ ++ +L+H V A+ L + G+ + P +A A Sbjct: 1122 VVTSYTDKERPRDRIRGFLDHAVAIAAECEDAAARTLSVVTSGKHCGRYALAPWSAVDAR 1181 Query: 1018 HYLSQLIE 1025 YLS+L+ Sbjct: 1182 AYLSELVR 1189 >UniRef50_Q4FSM9 Possible exoribodeoxynuclease V, gamma subunit n=3 Tax=Psychrobacter RepID=Q4FSM9_PSYA2 Length = 1512 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 196/989 (19%), Positives = 349/989 (35%), Gaps = 222/989 (22%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M + S+R + L + + + + FEP +++V S + WL T++ + GI+ + Sbjct: 1 MFTIIQSHRTENLVDQLL-VQYQSKNQPVFEPFIVIVPSMVLGDWLDKTIASRAGISTLV 59 Query: 61 DFPLPASFIWDMFVRVLPE----------------IPKESAFNKQSMSWKLMTLL---PQ 101 + W + VL +P+ + + M W+L L Sbjct: 60 RTKFWGQYQWTLMQDVLTRHNAYLLEIDPEAAILNVPEVAVLSPTVMQWRLFGYLTYYQA 119 Query: 102 LLEREDFTLLRHYLT-------------DDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQ 148 L+ +++ + L +++QL+S A +F++YL +R DWLA Sbjct: 120 LIVKDETHPVNPLLASLIDEPKEGGEQDKAQQDARIWQLASDLARVFNRYLTHREDWLAL 179 Query: 149 WETGHLV----------------------------EGLGEAQAWQAPLWKALVEYTHQLG 180 W + E E + Q LW L HQ Sbjct: 180 WSHNKPLNVDELIADKDALSLRFDKYARGTPDWLVEHYVELEVAQRFLWSHLFADVHQ-- 237 Query: 181 QPRWHRANLYQRFIETLESATT-CPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 HR + F L+ LP + I I LP L LQ L ++++I LL Sbjct: 238 ----HRVTIENTFWSALKDNKANERAQLPKILRIFTIQQLPQTELDFLQRLSQYMDITLL 293 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 NP + +W DI D ++L + +D G+ L Sbjct: 294 HYNPSKLFWADIVDKSWLQRQQIINPES----------------------VFLRDYGHSL 331 Query: 300 LASWGKLGRDYIYLLSDLESSQELD-----------------------AFVDVTPD---- 332 L+ GK RD +L++L +++ +F D D Sbjct: 332 LSRLGKQSRDTFAMLANLSGNEQYQDELVEWQDNFENSDDGLNDDFGFSFDDSAYDVDDA 391 Query: 333 ----------NLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP------------- 369 +LL +Q+D+L L+ ++ V S++ +K+ Sbjct: 392 NNSQITQNSPSLLRRLQNDVLMLDEQSTQQVTAATVSQAVSKQIEPSFDKEKPEMAWYED 451 Query: 370 ------------------LDSSITFHVCHSPQREVEVLHDRLLAMLEE-----DPTLTPR 406 D+S++ H CHS QR++EVL + L E + Sbjct: 452 EALENKRFERERFWVSSWQDNSLSIHSCHSLQRQLEVLRIMIGRWLNEPIKPGEKKRHIS 511 Query: 407 DIIVMVADIDSYSPFIQAVF--GSAPADRYLPYAISDRRARQSHPVLEAFIS---LLSLP 461 DI+V++ D++ + I ++F G LP ++ + EA I LL Sbjct: 512 DIVVLLPDVERHHALISSIFVSGKGQDGLTLPAKVTGVVDADIRQLWEAIIGFYKLLGSH 571 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL--PAT 519 +RF + +VL L +P L F +T E + + E+G G D+ ++++ Sbjct: 572 SARFEAPEVLDWLMLPPLFESFGLTHEQMSRGCDLLVEAGFIRGFDELHLKQTLDSNDFD 631 Query: 520 GQHTWRFGLTRMLLGYAMESAQ----------------GEWQSVLPYDESSGLIAELVGH 563 + ++ L R+ LG M A + LP + S A +V Sbjct: 632 YRFSFAQALDRLTLGLVMPEASLSDCLYPLAQDDWPSTTLPEMSLPLPQVSLNDAMIVEA 691 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI---- 619 L + L R Q+ E+WL + + D + M I Sbjct: 692 LCRIYAGLVARRDDHRQKMKAEDWLDQIETEVIHRYFGDVDQTRTMRAIYNAMNGFKSSL 751 Query: 620 ------------------IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 + + L + LS + D + L+ +++S G + Sbjct: 752 RANRHYKQYSSADSANKEVEQKLAGVEQLPLKLSFMLDSIESELESQQVSAEP-TGVITF 810 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM-SQKPKRGDRSRRDDDRYLFLEAL 720 +R++PF++V +L MN +P + +DLM + +RGDR DDD FL+AL Sbjct: 811 GRFGALRNVPFELVVMLNMNLSEFPGRERDNRYDLMKATNARRGDRVSEDDDNGAFLDAL 870 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY------------LPGDEALN 768 + A+ ++ Y G+S+ D E P+ + EL+ ++ + Sbjct: 871 LCARSACWMFYNGQSLTDTHEHLPANPISELLQFLQGEIQWQVNSLETLPKNIDPTTESL 930 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPG 797 +K L H +PF ++ Sbjct: 931 KRYLPKLIKQWLVTEHPALPFHESLFETE 959 Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 23/184 (12%) Query: 957 PQVQPDGLLRWRPSLLSVAQGMQLWLEHLVY---------CASGGNGESRLFLRKDGE-- 1005 + P L P+ S ++ WL HL + A+ +G S K Sbjct: 1321 AEQSPKQWLNILPNSASPRHLLKFWLSHLYWQVARRTTAEQAASNDGVSIWRFNKPSSQI 1380 Query: 1006 --------WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAM 1057 ++ P+ E A+ L + + P+ +LPE ++L C A+ Sbjct: 1381 KKYEKVTAFKLSPIVYEDAVVELIKWAVFAKLSGQVPITLLPEYALSYLDKCLQAEESGD 1440 Query: 1058 LDDDSTLQKA--RTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPE--TMEAIVEQSQRFL 1113 ++A +Y + + +Q + R A+ +Q Sbjct: 1441 EIGSYWPKRADFSDWLRPSYYSDTIYDTCSQHAIWQYVLRDQDAFKALSAALSTLAQPLY 1500 Query: 1114 LPLF 1117 P+F Sbjct: 1501 EPMF 1504 Score = 42.7 bits (99), Expect = 0.087, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 HP +AF + + +V+ + I EP L+ L+ YQI + L+N L Sbjct: 1122 VRHPAKAFLRTQ-KVHVVQGEEAIAHQEPLFLDSLTTYQIKEHLINEL 1168 >UniRef50_C9RQA7 Exodeoxyribonuclease V RecC subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQA7_FIBSS Length = 1256 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 208/1134 (18%), Positives = 377/1134 (33%), Gaps = 182/1134 (16%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML + + L+ L M V +PFE ++ + QW ++ QK Sbjct: 14 MLYLKFALNLENLADKMIDAVSDA-WTNPFEAPAVIFPDPKLEQWFRLKWVQKKK----- 67 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMT--LLPQLLEREDFTL-------- 110 F M R L EI +KQ + +++ +L L++ D Sbjct: 68 ---SLIGFKSMMIDRFLMEILIGDDTHKQKLHAEMLRNVILAHLVKETDGVPNYMRMDDE 124 Query: 111 LRHYLTDDS--DKRKLFQLSSKAADLFDQYLVYRPD-------------WLAQWETGHLV 155 ++ YL D D+ LF +SK A LF +Y RP L +W+ HL Sbjct: 125 VKRYLVIDRTLDETHLFDFASKMASLFLEYETSRPKDFIRRADGSSAPGILEKWKQDHLD 184 Query: 156 E-------GLGEAQAWQAPLWKALV-----------------------EYTHQLGQPRWH 185 + + + +AWQ L+ A+ E T L P + Sbjct: 185 DFFGIANHDIAKREAWQRELYSAIFHEHQGKPSLLTEVFENEAKRKGIERTEYLTIPYLY 244 Query: 186 RANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCR 245 +A + T + L FI G+ + Y LQ + +++ NPC Sbjct: 245 KACQDDKGNVTFHTEHIGNTPL----FIFGLGGMGQFYRVILQKYAETHDVYAYIQNPCM 300 Query: 246 YYWGDIKDPAYLAKLLTRQRRHS----------FEDRELPLFRDSENAGQLFNSD----- 290 +W D + R + +D + D NAG+ + D Sbjct: 301 EFWEDTSTVHDQNANIHRNWKSRDGQWKDNGTSLDDVREKMSVDYSNAGESTDVDDISEY 360 Query: 291 --GEQDVGNPLLASWGKLGRDYIYLLSD--------LESSQELD--AFVDVTPDNLLHNI 338 E + N LL +WG+ GRD I L S +E D D+ D LLH + Sbjct: 361 SNEEAEAENTLLCNWGRSGRDNIKLWCQAVNYDFDFSMSGREDDNRTAQDLPQDTLLHKV 420 Query: 339 QSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 Q I N + D S+ + RE+E LH + +++ Sbjct: 421 QYAIANRINTLP----------NFTASDCKARDFSLDITAAPTKIREIEALHTNISKLMQ 470 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR------------YLPYAISD--RRA 444 DI+V+ +D Y I+ +F P + ++P+AI D R+ Sbjct: 471 --KGARVNDILVVSPALDDYRTAIKTIFDQTPEKKKYAGENEKEGFLHIPFAIVDSPARS 528 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 + VL+ ++L LL PV+ IT+E + W+ + I Sbjct: 529 SLTENVLDNLFTILE--QGTITRPTFFELLRNPVVQLTRHITDEDVSNWESWIEATNIYR 586 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS-VLPYDESSGLIAELVGH 563 D + +E W G+ R+LL ++ LPY + + + Sbjct: 587 --DREQKKE---------DWMSGVRRLLLAKMTKNPVEFSDGEFLPYADMATSDNSSLCK 635 Query: 564 LASLLMQLNIWRRGLAQERPLE-------------EWLPVCRDMLNAFFLPDAETEAAM- 609 + L W ++ ++ + + L+ PD + Sbjct: 636 FVECIESLKKWMEFAGCKQNVKHEIVCENRIENLDKLCDFINEWLSMASSPDGFASERII 695 Query: 610 -TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS-QRFLAGPVNICTLMPM 667 + Q + + + ++ +++ L S + +P Sbjct: 696 VNDVTQSIEGLRNQMDA--GLQSISWKVVKQTLLNAAQSSAYSCGSLFVNGITFMNFIPN 753 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLM-SQKPKRGDRSRRDDDRYLFLEALISAQQK 726 R IP K + +G + +P DL S +P GD S RY FL L+S + Sbjct: 754 RIIPVKHLFFIGGDSMNFPGAKQQNTLDLRKSCRPWPGDDSPIAKRRYAFLCQLMSTSES 813 Query: 727 LYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 +ISY+ + I+ ++E +P+ +V ++ ++ + D + + L Sbjct: 814 FHISYVNQDIRKDAELYPTSVVNDIRKFLVNAVNSKTDVSNEKVSQSDAWPENKISLDET 873 Query: 787 MPFDPQNYQPGERQSYA-----REWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFW 841 F+ Q R A ++ A+ A + LP+ V + L F Sbjct: 874 RSFEDLFTQKSLRNKRAFLNMMQDGYAHANPETDAIESASNNITAKLPDRVSIYMLSSFL 933 Query: 842 AHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD--DAERLFR 899 P + L + +ED E EP L+ L + + + L A + + E+ + Sbjct: 934 KDPFQFRISQML-ADSDSEDPEKEMFEPVQLDALKKSTLLKMTLAAELSNKSDELEKFKK 992 Query: 900 RFRAAGDLPYGAFGEIFWETQCQEM--------QQLADRVIA---CRQPGQSMEIDL-AC 947 + G P G FG+ + + L ++ + + ++ + Sbjct: 993 ESKLKGGTPDGIFGDKLSSEIEENKKIIMDNMGEALVKKIKESWCYQAKIEDIQFERSDS 1052 Query: 948 NGVQITGWLPQVQPDGL--------LRWRPSLLSVAQGMQLWLEHLVYCASGGN 993 ++G L L + ++ + ++ L A N Sbjct: 1053 EKWTLSGSLDWSDSSDLGKITEMISITSSNKKPTIDNFLTPYIRALAVIAQRSN 1106 >UniRef50_C8NCI0 Exoribodeoxynuclease V, gamma subunit n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCI0_9GAMM Length = 1251 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 189/884 (21%), Positives = 335/884 (37%), Gaps = 89/884 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M R+ S L A + DP ++V + + L TL+ + GIAA I Sbjct: 1 MYRLIESTDYPALLARYLQDYDHYSRADPLGDTPLIVPTLPVGNILIQTLASQRGIAAGI 60 Query: 61 DFPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQL-------LEREDFTLL 111 L ++ W + R+ ++ ++ W+L + L Q LL Sbjct: 61 TLRLWHNYEWMLVERITGKSRSSSQAPLGNTAIRWELFSYLYQHGNTILADPGHPQHALL 120 Query: 112 RHYLTDDSDK------RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL--VEGLGEAQA 163 R L D+DK R+L+ S + A+L+ YL RP+WL+ W+ ++ L + + Sbjct: 121 RG-LYPDTDKITHDHTRRLWVYSGQLANLYSTYLNQRPEWLSAWQNADPPPLDALLKNDS 179 Query: 164 WQ------APLWKALVEYTHQLGQPRW-----HRANLYQRFIETLESATTCPPGLPSRVF 212 Q A ++AL + +L R+ R + F +TL++ + LP + Sbjct: 180 LQQLPPQIADHYRALYQQQSRLWHDRFAAIHAERERRRETFWQTLKTRESARRLLPPYIP 239 Query: 213 ICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDR 272 + + L ++ LG + ++ Y DI D +L +L R Sbjct: 240 VFAPTHLHAAEHDFMRRLGNYTDLTHYHLAASDGYIDDIVDSRWLRELKARAAGKPSG-- 297 Query: 273 ELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPD 332 ++ G+ LL+ +GK RD LL + L A P Sbjct: 298 ------------------EHREHGHELLSRYGKQQRDLSRLLHADSDPEPLPA-TPAPPH 338 Query: 333 NLLHNIQSDILELENRAVAGVNIE-----------------EFSRSDNKRPLDPLDSSIT 375 NLL +Q++I EL+ VA E + N P D S+ Sbjct: 339 NLLTALQAEIRELKEDHVAACLAATTLPPSLQSGGRTGRGCENRAATNPDHQTPQDHSLR 398 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF---GSAPAD 432 H CHS QR+ E L ++A L DP+ DI + + D + ++A F G + Sbjct: 399 IHGCHSLQRQCETLRSDIVAWLNADPSRRLSDIYIHLPDPAAAQTTLRATFPPGGDYDGN 458 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 R LP + + + + +L + RF + VL L I E ++ Sbjct: 459 R-LPARLIGVTENPAENLWRSLAGRYTLINGRFDAPTVLDWLHNEDTCHSLGINSEHMQR 517 Query: 493 LRQWVNESGIRWGIDDDNVRE--LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 + + +G R G D +++ ++T+ + L R++ G A ++ +P Sbjct: 518 ITAALVAAGYRRGYDGAHLQPTLHTEDHDHRYTYTYALNRLIAGVLTPDAD-HYREAVPQ 576 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 + + LA+L ++ R A+ P + WL R L+ + A A Sbjct: 577 HGLTLADLPALEALATLAENMHTLRALQAENTPAQNWLQHLRATLHDAYTH-AHNSPAWQ 635 Query: 611 LIEQQWQAIIAEGLGAQYGDA------VPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 ++Q + + Q +PL + + + +L ++ S +G + I +L Sbjct: 636 TLDQALDDLQNQLAAHQALAPQNEQHYLPLEFILENIENQLADQQNSSEP-SGVITIGSL 694 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS-QKPKRGDRSRRDDDRYLFLEALISA 723 +R++P K+ L + YP + ++L+ KP+ GD +R +D L+ + A Sbjct: 695 KNLRNLPGKLHIFLNADHDRYPARQNDERYNLIHLDKPRPGDNNREHEDLGALLDLINRA 754 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE--ALNCDESEARVKAHLT 781 L++ Y S DN + P+ VQEL+ Y+ H A ++ + H Sbjct: 755 GDALWLYYN--SHHDNEPQPPASPVQELLQYLDDQHERASQHLRASGRLDAGQTLPRHYH 812 Query: 782 CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 H PF P R + E + Q + P P Sbjct: 813 TEHPADPFQPD--AHETRPAPLWENIRTTLQQNTPTATETSPPP 854 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 68/347 (19%), Positives = 103/347 (29%), Gaps = 28/347 (8%) Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 D + + + + + T T P + G R WL + Sbjct: 884 DALASAAGEGWGGGSDRKTTATVASSTNTSPETLANMPPSTREGGARP---HAWLSNSQP 940 Query: 813 AGKAH-------SEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 A + PE + L + R P A+ + + + Sbjct: 941 APQKTFLPLHIPPALAADAAPQNPENLTLAQIVRDLQKPASAYARAH-HIANTAAQTPPE 999 Query: 866 DTEPFILEGLSRYQINQQLLNALVEQD-DAERLFRRFRAAGDLPYGAFGEIFWET----Q 920 EP L GL +Q +Q ++ AL + D R A P G G+I E Sbjct: 1000 SREPLALYGLDNWQADQHIIAALEQNHPDPATHIARLPA---YPGGISGQIQLEQRLATY 1056 Query: 921 CQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL 980 Q L DR P + +T LP P R S + Sbjct: 1057 RARQQTLLDRADLATWPTLREQTLNLGEHSSLTALLPAHSPT-WPRLSASRAKPKHHARY 1115 Query: 981 WLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPE 1040 WLEHL + A+G +G + + D R PL A A L Q + L E Sbjct: 1116 WLEHLAWNATGAHGTTLIHYADDTLLRLAPLPAADAQRQLHQWLAVREHLQKNLWLAPLE 1175 Query: 1041 SGGAWLKTCYDAQN--------DAMLDDDSTLQKARTKFLQAYEGNM 1079 +L+T + + DDS + + GN Sbjct: 1176 LMQPYLETFTTDKAADKQAALVRDWIHDDSHKNDDGDLWRHLWRGNE 1222 >UniRef50_Q057F6 Exodeoxyribonuclease V, g chain n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q057F6_BUCCC Length = 1042 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 147/785 (18%), Positives = 355/785 (45%), Gaps = 35/785 (4%) Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 L +++DIL ++ + ++K+ ++ D+SI+ + C S EV+++++ + Sbjct: 282 LSYLKNDIL-----------KKKIYKINSKKKININDNSISINQCKSYIHEVQIVNNYIH 330 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 LE + + DI++ ++ID Y P+IQ +F ++ L + + + +L Sbjct: 331 KTLETNKKIKLDDILITASNIDIYIPYIQKIFN-FSQNKNLLIKKTGKEEEKKKEILLTI 389 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 LL++ ++ F +L+LL++ +L +F I ++ L + ++ I +G + + +E Sbjct: 390 KDLLNIKNNYFKPFWILSLLNIKILRKKFSIKNRDIKTLGKLISHLNIAFGFNKKHYKEF 449 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 +P ++W + + R+ G+ + + ++ Y+ S+ L+G+ + + QLN Sbjct: 450 SIPDLKTYSWEYAIKRITSGFIFNNKNTIYNNIYTYNISNDKKNILLGNFINFIKQLNKL 509 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 R+ + +++ +E+W+ + ++ FF + + + L++ W+ I G+ + + + Sbjct: 510 RKKIYKKKKIEKWINIISIIIKNFFYIEKKDKKFFFLLKNIWKKNIFYGIKINFLKKISI 569 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 +E + +FL+G + + L + IPFKV+C+LG Sbjct: 570 EFFINEFFKNHSLLYKKNQFLSGNIKLINLNKINLIPFKVICILGCTQEKISLFNNQDIL 629 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 +L+ +K K + +FL+ + ++ L++SYI + N +PS + ++I Y Sbjct: 630 NLIEKKNKNNEN--------IFLKTIFLTKKYLFLSYIKNNYIQNK-YYPSKFILDIIFY 680 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG 814 I + Y + + + + + + +++ + + Sbjct: 681 IKNNFYYFKKKEKKKIQKKNFLNKIYKKNKNNIINS--LFSKEKKKIIKTKKNQKKYKKI 738 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIPDTEPFILE 873 + + + FW +P+ FF+ L+VN + + + E F ++ Sbjct: 739 NITIQKKIKIKKLIN----------FWKNPIEYFFKNTLKVNIKNYEENMFIEDEYFSIK 788 Query: 874 GLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA 933 L++Y+IN +L ++ + + F+ LP +I W + +++ L++++ Sbjct: 789 PLNKYKINSLILKNMLLNKKTDYHIKEFQLKNKLPQEKIAKILWYEKIKKINILSNQIKK 848 Query: 934 CRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN 993 R+ +++ I ++G + +V L++W + + + W++H++YCA Sbjct: 849 IRKFPKNIHIYYKFKKYYLSGKIKEVNKLNLIQWNVNKIKFKDIITTWIQHIIYCAFEKP 908 Query: 994 GESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQ 1053 +S L + + F + + A YL + I+G+ +G P+ ++ SG WL T + + Sbjct: 909 KKSILLSTNNKKIEFLSIKKKIAKKYLKKYIQGFIDGHKKPI-LILNSGIHWLHTIFLKK 967 Query: 1054 NDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFL 1113 + + + L A+ FL+ + G+ GE +I+ +++ L ++ I + ++ Sbjct: 968 ENVLKINKYNLNLAKKNFLKIWNGSNFFLGEKKNIFIKKIIPILNKNLIKKICNSCKYWI 1027 Query: 1114 LPLFR 1118 LP+F+ Sbjct: 1028 LPIFK 1032 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 81/179 (45%), Gaps = 9/179 (5%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML++Y SN+++ L + + ++ E+ L+++ + +WL++ ++ K I NI Sbjct: 1 MLKIYQSNKINFLLKKICKKIYIKKKKKILINEIFLIENKYVQKWLELYIANKKKINFNI 60 Query: 61 DFPLPASFI-WDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 F L F+ + + K F K+ + W ++ ++ + + L+ Y Sbjct: 61 KFILLFRFLNNFFKKNNIKKNKKLIIFEKKYLQWIIILIIYNTYD---CSFLKKY----G 113 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQW-ETGHLVEGLGEAQAWQAPLWKALVEYTH 177 + K F+ S A++F QY+ ++P + +W + + WQ LW +++ Sbjct: 114 IQYKNFEFCSHIANIFIQYIYFQPHLIYEWENNKKSKKKEKKTYQWQKKLWNLIIKKIK 172 >UniRef50_A7BX05 Exodeoxyribonuclease V gamma chain n=1 Tax=Beggiatoa sp. PS RepID=A7BX05_9GAMM Length = 458 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 144/475 (30%), Positives = 241/475 (50%), Gaps = 38/475 (8%) Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISA 723 + PMRSIPFKV+CLLGMND YPR LGFDL+++ PK GDRSRR +DRYLFLE+L+SA Sbjct: 1 MRPMRSIPFKVLCLLGMNDQTYPRPSKSLGFDLITKHPKPGDRSRRQNDRYLFLESLLSA 60 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 + YISY+G SI DN+ PSVLV EL+DYIG++ P + ++ Sbjct: 61 RDYFYISYVGHSIHDNTVMPPSVLVSELLDYIGKAFISP----------HQNLLDNIIIH 110 Query: 784 HTRMPFDPQNYQPGE--RQSYAREWLPA----ASQAGKAHSEFVQPLPFTLPE----TVP 833 H F P+ + + S++ E+ A ++ A + LP PE T+ Sbjct: 111 HPLQAFSPRYFNETDKHLFSFSDEYCHASSVLLNERQLAKDFIAESLPPPQPEANWKTLD 170 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD 893 + RF+ +P RL + ++E + ++EPF + GL RY++NQ L+ +E D Sbjct: 171 INRFARFFKNPSEFLLTERLGIKLQSETHLLGESEPFEVRGLERYKLNQTLVEKSLEGVD 230 Query: 894 AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR---QPGQSMEIDLACNGV 950 + +A+G LP+G G+ + ++Q +RV + +++ ++L + + Sbjct: 231 LHEYHKIAKASGQLPHGGIGDYAYSKLVGQIQPFVERVQQATTRQKKRETVLVNLTIDDM 290 Query: 951 QITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN--GESRLFLRKDGEWRF 1008 +ITG+L ++ D L+ +R + L +QLW+ HLV + L + ++G W F Sbjct: 291 RITGYLGRLWHDNLVHYRCAKLKATDFIQLWIHHLVLNSLPEQKLPRHSLLIGEEGSWEF 350 Query: 1009 PPLAAEQALHYLSQLIEG-YREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKA 1067 P+ +++ L L++ Y +G+ PL P+S A+++ + T ++A Sbjct: 351 KPVN--ESIVILETLLKAYYWQGLMQPLSFFPQSSLAFVEQLTTGK---------TEEEA 399 Query: 1068 RTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETME-AIVEQSQRFLLPLFRFNQ 1121 ++ + GN GE D+ +YQ + + T +++F P+ Q Sbjct: 400 FSRAQNTWRGNDFANGEFDNDYYQLCFGKETSPLDNGEFKILAKQFFEPMLAHLQ 454 >UniRef50_Q04UR0 Exodeoxyribonuclease V, gamma subunit n=4 Tax=Leptospira RepID=Q04UR0_LEPBJ Length = 1131 Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 195/1212 (16%), Positives = 418/1212 (34%), Gaps = 184/1212 (15%) Query: 5 YHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPL 64 S L+ + + + ER + P +I+V ST M WL + LS+ G++AN+ F Sbjct: 6 ITSLSLEDMAVELSRNILEERKNSPLHSPVIVVPSTNMKLWLNLNLSRFSGLSANLRFLY 65 Query: 65 PASFIWDMF--VRVLPEIPKESAF-NKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 + + F L P + AF ++++ K++T L + + ++ LR +L + Sbjct: 66 LEKALEEYFHLRANLDYDPFQRAFPSREATQRKILTFLIENVNSKETIFLRSFLE---NI 122 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVE------------GLGEAQAWQAPLW 169 + F LS+K L+ Y + R W+ W ++ E +Q L+ Sbjct: 123 TRAFSLSAKLTSLYKDYELNRSSWIQSWAKEKGIDIPMISRRPSPFPQEDEYYRFQKVLY 182 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 + + + + L Q F++ ++ T P + + +S L YL L++ Sbjct: 183 QKVFLNSKEPNT-------LVQFFLKEIQKDKTHSPRNFPSLHLFCLSNLADTYLGILES 235 Query: 230 LGK--HIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF 287 L + + I+L + Y + + + Q + +P Sbjct: 236 LSQKDKLPIYLYQFH--TGYVSNANNSLGPERWSDSQTHIALRTASVPGIIFKNLESVHT 293 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN 347 + N L G L DL + + +P + + +DIL N Sbjct: 294 YPKKLATLRNIL------KGNQNCDNLQDLSQDASVRFWNAPSPYREMESAANDILYRIN 347 Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHD-RLLAMLEEDPTLTPR 406 + ++ + R P VE + D +L + D Sbjct: 348 QDHRLTYLDFAILVTDMRVYRPA---------------VEWVFDGGILLQTKADAD---- 388 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR-F 465 P + +PY+++D +A ++ + + + Sbjct: 389 -----------------------PIRKKIPYSLTDIKANEASLLYRGLMDFWEICSGNSI 425 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 +L L P+L + E L L + ++ SG+++ ++ Sbjct: 426 DKRSLLKFLRNPLLHSNIRSNSESLSILEKLIDTSGVQYEESGREKDSFQI--------S 477 Query: 526 FGLTRMLLGYAMESAQGEWQ-SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 GL R+ L + + + P S + L+ + +++ ++ + + Sbjct: 478 NGLKRIRLSSILSQETAWTKYKIAPIFLESDEHSFLLTNFWETVLKAKNDILSFSEGKTI 537 Query: 585 ---EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 ++L R L F + E L + ++++ + +SLL+ Sbjct: 538 RWTPDYLKTVRASLEELFEFPGKYEQEGKLFQNWSESLLEWEGIRLHNKEEGISLLKFVT 597 Query: 642 AQRLDQERISQR-FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 Q DQ + +L G V I L PMR +PFK + +LG+ +G +P +L Sbjct: 598 EQTFDQIPYRKGAYLTGGVTISLLQPMRPLPFKHIYILGLGEGKFPGSNDRSQLNLRKDF 657 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 + D S R+ L E + SA++ L +SY+G+++Q++ P + E+++ + Sbjct: 658 REEWDISHREIQESLLWETIHSAKESLTLSYVGKNLQEDKTFEPCSHLFEIMESLQIKKA 717 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF 820 + + HT + Q + R W+ F Sbjct: 718 VELPLHSYS----------IKYKHT----SEELKQGLVSYDFGRVWVNGNRNDYTILDRF 763 Query: 821 VQPLPFTLPET------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 P + + ++ L +F + P+ + + +L + E+S + E F L+ Sbjct: 764 QNPKELAKTSSTPLSSGIDVKELSQFLSDPLDTYLKRKLGMYLEEEESSDYEKEIFDLDA 823 Query: 875 LSRYQINQQ--------LLNALVEQDDAERLFR-------RFRAAGDLPYGAFGEIFWET 919 ++ I ++ L++ D E++ + R++ P FG+I Sbjct: 824 IAETSILRKVHALMVPDLVSKESWSWDREKILQVLSPILEMERSSAKFPRSVFGKIQETD 883 Query: 920 QCQEMQQLADRVIACRQ------------------------PGQSMEIDLACNGVQITG- 954 + + ++ + + +++ L I G Sbjct: 884 LVRYLVTTSENLFEWKPIFQGGTYYPYLSLGDTGLSDSICKKMPELKVPLESGRFSIKGE 943 Query: 955 WLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL-VYCASGGNGESRLFLRKD----GEWRFP 1009 W ++ DG L W S + + +L + + + + + F Sbjct: 944 WEHVIEKDGNLYWLFSKSLEEKPSEDYLGYKDYWRTMSFPFLTGVAFASSNENFKVYSFK 1003 Query: 1010 PLAAEQAL------------------HYLSQLIEGYREGMSAPLLVLPESGGA--WLKTC 1049 P +E++ YL++++ Y + + P+ P +LK Sbjct: 1004 PRPSEESKKKNTLTLEYRIGSPSIGIEYLAKILMEYLK--TEPV-FFPRKAFLNYYLKNI 1060 Query: 1050 YDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQS 1109 + LDD + A +FL+ E N + G +L+ + +++ ++ + Sbjct: 1061 QGDSKNKTLDDVFDDESAWIRFLKE-ELNEVKSGLS---SLVKLYPKTPNLILQSRIQWA 1116 Query: 1110 QRFLLPLFRFNQ 1121 + F P + + Sbjct: 1117 KNFYKPFLDWRK 1128 >UniRef50_Q6A851 Exodeoxyribonuclease V gamma chain n=3 Tax=Propionibacterium acnes RepID=Q6A851_PROAC Length = 1049 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 135/734 (18%), Positives = 249/734 (33%), Gaps = 61/734 (8%) Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPA 431 ++ H CH R+ EV+ D + A L + PTL PRDI+V+ + + A Sbjct: 289 TVEIHQCHGVDRQAEVVRDVVCAALADYPTLEPRDIVVICCGRQDTAHLLSAGTLADIDH 348 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 + + + +PV EA ++L L SR +D+L+L +P + RF +++ Sbjct: 349 PAHQLRFTTPPQREHVNPVTEAVTTILGLASSRATGQDLLSLCAMPAVQTRFGFSDDDQE 408 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS-VLPY 550 + + V+++ IRWG+D + L Q TW G+ RM+L AM S + V P Sbjct: 409 AIERLVSQADIRWGVDPAARDKAGLGRIKQSTWLAGIERMILAIAMSSTPPTYLGTVTPI 468 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 + LVG LA + ++ P+ W +++ A+ + Sbjct: 469 TDVGSTTIPLVGKLAEFVSRMRKAFLDTETPAPIATWKRRVSQIVDNLAAAPADAPRSAL 528 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 A++ G + D L R + G + +C + + Sbjct: 529 QTL----ALLTGLEGVAEDREFDRQEIIDLLNWLSGIHRGRHSWFDGSIQVCRPGELTPV 584 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 +VV ++ + A L L + ++R+D L+ +SA+ L + Sbjct: 585 DHEVVIVVDPDQE---AVHADLLQGLRDENLDPAAKARQD-----LLDVALSARTLLVVV 636 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 RS N P + L + P H PF Sbjct: 637 RQARSPVSNLTVLPGPFTRTLSQALKAQSATPR-----------------CVKHGLQPFS 679 Query: 791 PQNYQPGERQSYAREWLPAASQAG-------KAHSEFVQPLPFTLPETVPLETLQRFWAH 843 + +++ AA+ AG + H + P+ + L L +H Sbjct: 680 ADEFSHHSDTAWSGFDNTAAAAAGCHPGSQPRPHRVVLPPVAKLPESRMSLIDLTLALSH 739 Query: 844 PVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRA 903 P R + R +++P P L +Y I ++L L + R Sbjct: 740 PARTLLRARAGAPANERSTDLPVDLPLAPSSLDKYWIRSRILADLEHGFLLDDAINAERL 799 Query: 904 AGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG--QSMEIDLACNG------------ 949 G P G G+ ++ Q+ R R Q +EID + Sbjct: 800 RGSTPPGHLGQHIVTKLAEDAMQICQRANRLRGDQDEQFIEIDFDLDEGNSPPLLWPDEL 859 Query: 950 -------VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYC-ASGGNGESRLFLR 1001 V + G + V+ ++ S + + LW++ L A+ G + + Sbjct: 860 IVDPMHPVHLHGRV-GVRNHQIVHAVASRANARPLLDLWVDLLAVTVATDEPGWFGVLVP 918 Query: 1002 KDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDD 1061 R A + A L+ L + + + A ++ A ND Sbjct: 919 NGDVLRMASPAPDHARDILAGLARVAWWSNQQLIPLPVKLAHALVELSPMAHNDYRTGAS 978 Query: 1062 STLQKARTKFLQAY 1075 + + ++ + Sbjct: 979 ALQVQWSREWDPNW 992 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 87/235 (37%), Gaps = 28/235 (11%) Query: 23 RERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPK 82 E DPF +++ ++ L +L+++ GIAA ID P + +L + Sbjct: 23 SEPTTDPFVRPILVAPGNAQSRSLLQSLARRHGIAAGIDTTTPLGLRERLEEDLLGVKRE 82 Query: 83 ESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK---RKLFQLSSKAADLFDQYL 139 + S++ ++ ++ F ++ +L + R + + +AAD Sbjct: 83 NDPWQPGSLALRICRVIEN--NSPGFEVVSAHLEASRRQGVPRATWTTARQAADAIC--A 138 Query: 140 VYR--PDWLAQWETGHLV-----------EGLGEAQAWQAPLWKALVEYTHQLGQPRWHR 186 + R D L W G + L A+AW APLW+ L+ + P Sbjct: 139 LARDSHDVLNAWADGATPTTHQGDTDLAGDPLDPARAWWAPLWRTLLAEPCHVPDP---- 194 Query: 187 ANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 + +Q ++ + + + P + + + +AL ++ ++ Sbjct: 195 VSRHQLLVDAILTQSRSEPP----IVWFSSTTTAQHDVSLAEALSASHDVTIVHL 245 >UniRef50_C0GDI4 ATP-dependent nuclease subunit B n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDI4_9FIRM Length = 1147 Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats. Identities = 177/1089 (16%), Positives = 317/1089 (29%), Gaps = 195/1089 (17%) Query: 14 EALMEFIVERERLDDPFEPEMI-LVQSTGMAQWLQMTLSQKFGIAANIDFP----LPASF 68 + +P P +I LV Q ++ L+Q G F Sbjct: 15 TQRCLQSIAHYSKTEPMGPPIIFLVPEQATFQ-MERELAQMCG---GGTFRAQVLSFRRL 70 Query: 69 IWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF--Q 126 + + P S +Q +L +LL+ L + + ++ F Q Sbjct: 71 AYHLLQSKGGLPPVMSELGRQM-------VLRRLLQESQAEL---TIFGRAAQQPRFCEQ 120 Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHR 186 L+ + +L + YLV P+ L + GEA L + + R Sbjct: 121 LAVQIREL-NNYLVS-PEML---KNQAASPETGEALR------SKLSDLSTVFAAYRTFT 169 Query: 187 ANLYQRFIETLE--SATTCPPGLPS--RVFICGISALPPVYLQALQAL---GKHIEIHLL 239 A + +TL +A LP+ RV++ G + P Q L AL +H+E+ L Sbjct: 170 AGSFMDPEDTLAILAAAVEEGALPAGTRVWVDGFAGFTPQEFQVLSALFSTAEHVEVALC 229 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 DP ++ E ++ +P Sbjct: 230 L------------DPRHIPAQPQ-----------------------------EDELFHPT 248 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 L + L L + A L Q+ E V Sbjct: 249 L--------ETYLQLRRLVGEAGVPAL--PPEQLPLDEKQTRFAHSEALQVLEAGFGRLP 298 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 R + I + EVE + +L ++ + RDI +++ D Y Sbjct: 299 VESYPREAEE----IRLVTAAGTRAEVEAVACDILHLV-REKGWRFRDIGMILRDFSRYH 353 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + A+F + +P+ + +RR+ HP++E S L + F E VL LL +L Sbjct: 354 DLVAAIF----QEYQIPFFVDERRSATHHPLVEFLRSALDAAQANFALEPVLQLLKTDLL 409 Query: 480 AARFDITEEGLRYLRQWVNESGI---RW--GIDDDNVRELELPATGQHTWRFGLTRMLLG 534 I+ E L + GI RW G L L + L Sbjct: 410 P----ISRETADKLENYARAHGIRGSRWLDGKPWSFRLRLSLDESRDTATETDAH---LE 462 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 E + P++ G A A + E L+ W Sbjct: 463 EINEGKTVFGRIFTPFNRQVGGSARPA---ADFCRAIWALLESTDAELQLQNWSEE---- 515 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 + T A + ++ + + + L L L+ + Sbjct: 516 -----DANPATAAQHRQVWSGVVELLEQIVSTLGERQISLQEFSQILQAGLEALTLGLVP 570 Query: 655 LA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG--------- 704 V + ++ R + +LG+++G +P +L G L++ + + Sbjct: 571 AGLDQVIVGSVERSRQPRLRAAYVLGLSEGDFPARLKEEG--LLADEEREALQENGVDLA 628 Query: 705 --DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 R + ++YL AL + + L++S + + PS L L + + Sbjct: 629 VTKRQKLFHEQYLSYIALTRSSEYLWVSCPLADE-EGKAKRPSALFNRLRETFPYNDVHF 687 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK------- 815 + E + + G + A + Sbjct: 688 FGNTPDSKEDLHALAGAEKSAAALLLQAGGVAAGGAMSDFWAAAYNEALSIPQVYNRMRM 747 Query: 816 -----AHSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDS- 862 + PLP + + L++F P F + L++ R E Sbjct: 748 LWPSLTERNHIAPLPAETVLEILGTELKSSVSRLEQFARCPFAHFARYVLRLQERHEFRV 807 Query: 863 EIPDTEPFIL------------EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYG 910 E P+ F EGL Q+ + A + E L R + L Sbjct: 808 EAPEMGNFFHHALRLFAESLQAEGLDWAQLETEEAQARMNSI-VEELIPRLQGEILLSSA 866 Query: 911 ---AFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG---VQITGWLPQVQPDGL 964 E ET Q + L + + ++E+ Q+ Q++ G Sbjct: 867 RMRYLAERLKETLAQAVAALTEHARRSQFKTVAVEMSFGSGKTPAWQLRCGQTQLKLYGQ 926 Query: 965 L-RWRPSLLSVAQGMQLWLEHL-------------VYCASGGNGESRLFLRKDGEWRFPP 1010 + R + WL + V+ + L + K+ F Sbjct: 927 IDRIDLAEAEGK----AWLRVIDYKSTPIELKLSDVWHGLSLQLLAYLAVVKENARAFSA 982 Query: 1011 LAAEQALHY 1019 L AE A Sbjct: 983 LPAESAGAL 991 >UniRef50_Q9K2F1 Exodeoxyribonuclease V, gamma subunit, putative n=7 Tax=Chlamydophila RepID=Q9K2F1_CHLPN Length = 1024 Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats. Identities = 174/1130 (15%), Positives = 361/1130 (31%), Gaps = 210/1130 (18%) Query: 6 HSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLP 65 SN L A + + PF ILV + W++ L D Sbjct: 11 FSNSPRHLLAQLAEDITSTH-QKPFTKRWILVANATTGHWIKNQLVHVLS-----DHIFM 64 Query: 66 ASFIWDMFVRVLPEIPKESAFN----KQSMSWKLM--TLLPQLLEREDFTLLRHYLTDDS 119 S I+ ++ + S + ++ L+ +L ++ + F R +L+ + Sbjct: 65 GSTIFTASDSIVKHLFLGSGCSQPNIPDYLTLPLLINNILEEISKASKFENGREFLSPPT 124 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 ++ + K A F Q+ + A +Q L++ L Sbjct: 125 -----YETTKKLAAAFKQFHTF------------SQRPTKNASHYQ-ELFQIL------- 159 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 H ++ + F L + T + I G + LP + L + ++ Sbjct: 160 ---ESHFSSYEEMFTTILNNRTQEEDC---SLHIFGYAHLPKHLAEFFINLSTYFPVYFY 213 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 +PCR Y+GD+ + + ++ A L Sbjct: 214 CFSPCREYFGDLLSDRAIDFFWNQLPDSPIKNAWEHYVLSDRQA---------------L 258 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 LA+ + D E + + F+ D+ L IQ+ IL+L+ + + + Sbjct: 259 LANLAHKSQSSQNFFLDREIDYQ-EMFLPSKHDSSLGVIQNSILDLKPTSPQDFSQTK-- 315 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 +I + + REV+ + ++ +L ++P +I ++ + I+SY Sbjct: 316 ------------QTICIYRALNIPREVQEVFCKVTELLHR--GVSPEEIFILSSHIESYK 361 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + A+F ++P +D ++ + + L S+ ++ +L LL P L Sbjct: 362 VHLNAIFN-----PHVPIYFTDEVDPRAEDLRNKILLLSSILQTQGDLHYILQLLTHPQL 416 Query: 480 AARFDITEEGLRYLRQWVNESGIRWG-IDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 I + + YL + ++ WG I + G M+ Sbjct: 417 QQ--PIDQNKVPYLIKKLSS---EWGKISSKDRAS--------------------GQQMK 451 Query: 539 SAQGEWQSVLPYDESSG--LIAELVGHLASLLMQLNIWRRGL--AQERPLEEWLPVCRDM 594 + P+ + G E+ L+ + + + E+ Sbjct: 452 ALGDLILEEYPFHQEGGRVSQVEVWETTVPLIYFIQERINLYLSSSQHSYEDLFQNVFSC 511 Query: 595 LNAFFLPDAETEAAMTLIEQ-QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 L F+ E + +T + + + L L + S Sbjct: 512 LEKIFVLSPEETSFITTLRNSLFPTFATSSCSLLFFTDFCLDFLLHF-------HKPSPL 564 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ---KPKRGDRSRRD 710 + I +L + IP V +LG N + + FDL+++ + S D Sbjct: 565 YDKPGPYIGSLSSLSLIPKGYVFILGAN-----KTTSSDIFDLLNRTTTHEELAFSSTED 619 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 ++ + FL+ L+S + +L+ISYI + Q N PS + + + + Sbjct: 620 EENFHFLQILVSTKHELHISYISSAAQFN---LPSPFLNHIKETLDLP------------ 664 Query: 771 ESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL------ 824 P+ ++ ++E+ + + A + + L Sbjct: 665 ----------VETLPTQPYLSAFFKNKACLHTSQEYNYSLAHAFYSKKALLPSLFIPTVK 714 Query: 825 PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL 884 LP+ + L + + P+ F + + + + F +++QI Sbjct: 715 QVNLPQHLSLNEIIKGIFSPLDLFLKTNYNLRISYPEHLKKQQKLF----PTKHQIEDFW 770 Query: 885 LNALVEQD---------DAERLFRRFRAAGDL--------PYGAFGEIFWETQCQEMQQL 927 V+++ AE LF +R L P + + + + E + Sbjct: 771 NECFVDKEHDLIPSISPHAEELFTYYREKTILLRNGLDKDPKHSPYTVTFSSSIFEERPY 830 Query: 928 ADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPS----------------- 970 + + + + N VQI G + V +GL Sbjct: 831 HESYLF-----PPLSLSFQGNPVQIHGTIHGVCNEGLYLCSIDPGDSLKKTTRTLGSLPE 885 Query: 971 -LLSVAQGMQLWLEHLVYC-ASGGNGESRLF---LRKDGEWRFPPLAAEQALHYLSQLIE 1025 Q ++ ++ V + + +S L E PP + YL +++E Sbjct: 886 TSSEQKQLLERYVALAVLQMSQHLSSDSALIKLTSFNXKENHHPPFS--DPEXYLRKVLE 943 Query: 1026 GYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAY 1075 Y S P+ +L S W KT D + + ++A+ L + Sbjct: 944 VYHLMSSQPIPLL--SPLCW-KTLDDEEKFHQAVLSAISEEAKNPSLPIF 990 >UniRef50_B1I494 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Peptococcaceae RepID=ADDB_DESAP Length = 1165 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 136/954 (14%), Positives = 258/954 (27%), Gaps = 189/954 (19%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID--FPLPASFIWD 71 + + + P + LV Q + L+ G++ W Sbjct: 19 LEEIRKELRQAPDGPPL---VFLVPEQATFQT-EYALALTPGLSGMFRAQVLSFRRLAWR 74 Query: 72 MFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL------- 124 +F V P + + +L L ++ +L Sbjct: 75 VFSEVGGAAR------------------PHVGDVGKRMMLARILARRRNELRLFGRAAGQ 116 Query: 125 FQLSSKAADLFDQ---YLVYRPDWLAQWETGHLVEGLGEAQAWQAPL--WKALVEYT-HQ 178 + S A + + YLV P+ L Q ++ G E + QA L + L + Sbjct: 117 YGFSGTLAGVLSELKTYLVT-PEALEQ--AVRMLPGTAETDSLQAKLEDLRLLYTDFERE 173 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL---GKHIE 235 L + L + T V++ G + P L+AL + Sbjct: 174 LAGKYIDPDDYLTLLAARLGESPTLRAA---EVWVDGFAGFTPQEYAVLEALLKAAARVN 230 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 + L DP + + + + R +N +L Sbjct: 231 VALCL------------DPRSGRREDLELFQVTRDTRARLAELARKNGVELERPVELAGP 278 Query: 296 -----GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV 350 NP LA L R++ + F + Sbjct: 279 PARFRANPALA---HLEREFFR--------RPTKKFAGPPEN------------------ 309 Query: 351 AGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV 410 + S + EVE +L L + RD+ + Sbjct: 310 -----------------------LRLVAAASRRAEVEGAAREILR-LSRERGWRWRDVSL 345 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 +V ++ Y + VF +P I +R + HP++E S L + + V Sbjct: 346 VVRNLADYHELVATVFADYG----IPCFIDRKRPVRHHPLVELIRSALETVTENWTYDPV 401 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 L ++ + L +V GI+ + P + L R Sbjct: 402 FRYLKTDLVPVSRG----DVDLLENYVLAHGIK-------GAKWADPEDWHYRRSDALNR 450 Query: 531 MLLG------------YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + Y E + + + G + L L L Sbjct: 451 PVPNGTGAPAPSDRDRYLREKVNRIRRRAARHLLDFQRRVQAAGTVRELTAALYDLLSDL 510 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 +EEW A E + ++ + + +A+ Sbjct: 511 DVPGRIEEWSR------EAETEGRLEAAREHRQLWDGVVELLDQVVETLGDEALTPEEYG 564 Query: 639 DELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 L +D +++ A V + +L R+ + +LG+++GV P + G L Sbjct: 565 RILDSGMDGLQLALIPPALDQVLVGSLERSRNPDIRAAFVLGVSEGVLPGRHGGTG--LF 622 Query: 698 SQKPK-----------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 + + + R + +++YL AL A L++SY + PS Sbjct: 623 TDREREVLLAAGLEVAPDTRRKVYEEQYLVYIALTRAGHYLWVSYPLADE-EGGALAPSS 681 Query: 747 LVQELIDYIGQSHYLPGDEALN-------------CDESEARVKAHLTCLHTRMPFDPQN 793 ++ L + + + L + + DP Sbjct: 682 VIPRLRELFPGLREETLALEPEGTAPGADLPYVTAPGRTLGFLVTRLRDWKSGVTVDPVW 741 Query: 794 YQPGERQSYAREW-------LPAASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHP 844 + + W L + + P + + L+ F P Sbjct: 742 WSVFNWFAAHAGWRERCAPVLAGLFYENREPRLDPELTPELYGSRLVVSVSRLEEFRGCP 801 Query: 845 VRAFFQMRLQVNFRTEDS-EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL 897 F + L++ R PD F L + +L A +E D E Sbjct: 802 FAHFARYALRLKERDVCRLAAPDIGLFFHAALKTF--EDRLREAGMEWDALESA 853 >UniRef50_A4J4E2 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Desulfotomaculum reducens MI-1 RepID=ADDB_DESRM Length = 1155 Score = 311 bits (797), Expect = 9e-83, Method: Composition-based stats. Identities = 125/675 (18%), Positives = 216/675 (32%), Gaps = 90/675 (13%) Query: 318 ESSQELDAFVDV--TPDNLLHNIQSDILELEN----------RAVAGVNIEEFSRSDNKR 365 E EL+ F T LL + + LE R I + + Sbjct: 241 EPCDELEFFYPTVETYHTLLDMAGALRISLEPPIICGKETPVRFQKDSAIAHLEKYYFRH 300 Query: 366 PLDPLD--SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 PL D ++ C + + EVE ++ + + L+ RDI+V++ D+ +YS I Sbjct: 301 PLQASDAAQGVSLVACANRRAEVEAAAREIIRLC-REEELSWRDIVVVLRDLTNYSDLIN 359 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 +F D +P I ++R HP++E S L + + + V L ++ + Sbjct: 360 TIFN----DHGIPVFIDEKRNVLHHPLVELIRSALEVITQHWAYDPVFRYLKTDLIPVQ- 414 Query: 484 DITEEGLRYLRQWVNESGI---RW--GIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 + + L +V GI RW D R+ L L Sbjct: 415 ---RDDVDRLENYVLAHGIRGNRWNDNRDWTYRRQYTLGEDCDIDDNEAEQLAQLNVVRY 471 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 +A + G++ + L L+ +E W A Sbjct: 472 AAIEHINNF-------SKKVANCGNVRQITTALFELLESLSVAERMEAWAK------EAE 518 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-G 657 I ++ E + A + L L L+ ++ Sbjct: 519 VAGRLIEAKEHAQIWDNVILLLDEIVEAMGEQELNLEEYLQVLEAGLESLKLGLIPPGLD 578 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK-----------RGDR 706 V + TL R+ K +LG++DGV P + G L S + G R Sbjct: 579 QVVVGTLERSRNPNVKAALVLGISDGVLPARPVEEG--LFSDYEREALREIGLNLAPGAR 636 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG--QSHYLPGD 764 + D++YL AL A +L++SY + PS ++Q + + + Q LP + Sbjct: 637 RKLFDEQYLIYTALTRASSRLWLSYPQADD-EGKALMPSPVIQRVKELLPLIQEEILPVE 695 Query: 765 EA---------LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ--A 813 N S + + A L DP ++ + + A Sbjct: 696 PPCLGGDLAFIANPSRSLSYLAAMLRETVAGRLVDPVWQDVYSWFVQQPQYQESCRRVLA 755 Query: 814 GKAHSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 G H LP ++ + + L+RF P F L++ R++ Sbjct: 756 GLYHVNQETSLPPSMGRRLYGSRLRASVSRLERFTTCPFSHFLSHGLKLKERSQ------ 809 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 F L Q L AER+ G L G I E + Q Sbjct: 810 ---FKLAAPDLGQFFHAALKLF-----AERIKALSLDWGQLSRGQIITITGEIVEELAPQ 861 Query: 927 LADRVIACRQPGQSM 941 L + ++ + + Sbjct: 862 LQNEILLSTARHRYL 876 >UniRef50_Q3KL55 Exodeoxyribonuclease V gamma chain n=11 Tax=Chlamydia RepID=Q3KL55_CHLTA Length = 1006 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 171/1094 (15%), Positives = 319/1094 (29%), Gaps = 195/1094 (17%) Query: 6 HSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTL--SQKFGIAANID-F 62 SN +VL A + + P ILV S+ WL+ L + I F Sbjct: 11 FSNYPEVLLAKLAQDLFSI-NQTPMTKRWILVPSSDTDHWLRRELVKASSNHIFMGTHIF 69 Query: 63 PLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKR 122 +F+ +F + S + ++ + LL + + +L S Sbjct: 70 ASFDAFVKYLFTGT--RLVDLSTPDHITLPLTIYNLLKESSFNSSSEVSYSHLQKLSSIF 127 Query: 123 KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQP 182 K F F Q +K L P Sbjct: 128 KKF-------YTFSQ-----------------EPSTNNPY------YKNLFAQLKDSYTP 157 Query: 183 RWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTN 242 S P P + I G LP ALGK+ +H + Sbjct: 158 LETI----------FSSILDHPLEYPCSLHIFGYPQLPQHVASFFVALGKYFPVHFYCFS 207 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS 302 P Y+GD+ +A L R E E + D LLA+ Sbjct: 208 PSAAYFGDLLSDKAMAALSPRIPEPQQETWEKYVLTDRLA----------------LLAN 251 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 + D E + F + LH ++ L+ Sbjct: 252 LAHKSQSLQNFFLDCSVPYE-ELFQPYEKLSSLHIVKDSFFHLQP--------------I 296 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 +++ +I S REV L + +L + ++I ++ +++ Y + Sbjct: 297 DQKLFSNSPQTIFVRQAPSASREVHQLFSLVSQLLHS--GVPAQEIFILSSNLSKYETLL 354 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 + +F + +LP ++ Q+ + + +++ S+ D+L +L P L + Sbjct: 355 RGIF-----EPHLPLYLTKTEKTQTRTLKNKLLLVVTFLFSKGSLNDLLRILSHPDLLS- 408 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 + + +L + ++ + + P T + R+L Y G Sbjct: 409 -PLETTKMGFLTHKLTHY-------WKSLSQKDSPLTQL------IHRILDEYPFIDDTG 454 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL--AQERPLEEWLPVCRDMLNAFFL 600 AE + LL L ++++ EE + L F Sbjct: 455 SVN-----------EAETWEVVVPLLHTLQQVTASYIESKDKTYEEHSRLIFSTLENIFF 503 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PV 659 E A + + + Q + L++ + L + Sbjct: 504 LSTEEHALLVSLSKTLQPFVRSSC--------SLTIFIEFCLDFLSHIPGHSQLYNQPGP 555 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD---RSRRDDDRYLF 716 I +L + IP +LG N + + L+ + D S D+D F Sbjct: 556 FIGSLNSLSLIPKGYTFILGANK----KDHSLDTSFLIDPSLIQEDFLFSSTEDEDNLHF 611 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG-QSHYLPGDEALNCDESEAR 775 L+ ++S + +L+ISY+ S PS ++ L+D + Q +L G + S Sbjct: 612 LQTIVSTKHQLHISYLSSSKN---PALPSSALKHLLDAVPIQEEHLSGKLYAKKNFSSEP 668 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLE 835 + + P KA S F TLP + L+ Sbjct: 669 LHQSYQVYYRMAQVSP--------------------LQNKAPSLFKSDTTKTLPSHLSLQ 708 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN--------- 886 L + + P+ F + +F + +E LL+ Sbjct: 709 HLIKAFKDPLNFFLSTQHGFSF-HPKALFSKSEKVFPSPHDAKAFWNHLLSSKTPLPTTN 767 Query: 887 ------ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQS 940 + D + + +R P + + Q D + Q Sbjct: 768 YLSAFTESLYTDVQDSVSKRLETLQKDPATTPFSVVFSDQL-----FHDPLHPNDQQVSP 822 Query: 941 MEIDLACNGVQITGWLPQVQPDG--LLRWRPSLL---------------SVAQGMQLWLE 983 + + L + + G + V G L P + ++ +L Sbjct: 823 LLLSLPLKNIHLQGTIHGVCSKGVYLFSMHPGEAFKKTQKTHGFPKDAFELESYLESYLS 882 Query: 984 HLVYCASGGNGESRLFLR---KDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPE 1040 + AS + LR D E PP ++ + YL + I Y + + + Sbjct: 883 LALLQASHLLPKEATILRVTPHDIEPILPPFSSPE--SYLIRAIHLYELLQNQAIPLPSA 940 Query: 1041 SGGAWLKTCYDAQN 1054 ++K A Sbjct: 941 QAWEYIKKTDSASQ 954 >UniRef50_B7JDU3 ATP-dependent helicase/deoxyribonuclease subunit B n=77 Tax=Bacillus RepID=ADDB_BACC0 Length = 1171 Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 126/952 (13%), Positives = 286/952 (30%), Gaps = 172/952 (18%) Query: 60 IDFPLPASFIWDMFVRVLPEIPKES-----AFNKQSMSWKLMTLLP-----QLLEREDFT 109 I + +P + ++ F+ ++WK++ + + E Sbjct: 35 ILYLVPEQMTFQTQQALIGSEDVRGSIRAQVFSFSRLAWKVLQEVGGASRLHIDEAGVHM 94 Query: 110 LLRHYLTDDSDKRKLFQLSSK-----------AADLFDQYLVYRPDWLAQWETGHLVEGL 158 LLR + D +FQ +++ A+ F +Y V + W+ Sbjct: 95 LLRKIVESRKDGLSVFQKAAEQNGFFEHLGSMIAE-FKRYNVTPSNVYEMWQQLDAHSSS 153 Query: 159 GEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA 218 E Q L + + QL + RA L +++++ + LP ++ G Sbjct: 154 AE----QKLLANKVYD--LQLLYDDFERA-LIGKYLDSEDYLQLLVEKLPQSEYVKG--- 203 Query: 219 LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFR 278 VY+ + +L ++ R Sbjct: 204 -AEVYIDGFHSFS-------------------------PQELEIVRQLMICGARVTITLT 237 Query: 279 DSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNI 338 E ++ + L + + ++++ I Sbjct: 238 IDEKTLAQPVNELDLFYETTL----------TYEKIKQVAREEKIE-------------I 274 Query: 339 QSDILELENRAVAGVNIEEFSRSDNKRPLDP--LDSSITFHVCHSPQREVEVLHDRLLAM 396 + I +E + RP + ++S+T H + + EVE + + + Sbjct: 275 EKTIPLMEQPRFHSPALAHLEMHYEARPNEKFHGEASVTIHTAANLRAEVEGVAREIRRL 334 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + E RDI V++ + +SY ++ +F +P+ I ++R HP++E S Sbjct: 335 VAE-ENYRYRDIAVLLRNGESYYDVMRTLFTDY----NIPHFIDEKRPMSHHPLVECIRS 389 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAA---RFDITEEGLRYLRQWVNESGI---RWGIDDDN 510 L + + + V + +L R + E + + G+ RW +D Sbjct: 390 ALEIISGNWRYDAVFRCVKTELLYPLDVRKETMREEMDEFENYCLAYGVQGKRWTSEDPW 449 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL-------IAELVGH 563 + + G +S + + + + + G Sbjct: 450 MYRRYRSLDDTN-----------GMITDSEREMEEKINRLRDVVRTPVIRMQKRLKRAGT 498 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 + + + ++ L + LE + + F D E + ++ +++ Sbjct: 499 VMQMCEAVYLFLEELDVPKKLEALRIRAEESGDFLFATDHE------QVWEEVMSLLDTF 552 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMND 682 + + + LS+ D ++ L+ + + + V I + R K ++G+N+ Sbjct: 553 VEMLGEEKMSLSMFTDVMSTGLEALQFANIPPSLDQVLIANIDRSRLSNVKATFVIGVNE 612 Query: 683 GVYPRQLAPLGFDLMSQKPK-----------RGDRSRRDDDRYLFLEALISAQQKLYISY 731 GV P G ++S + + R +++++ + + A +KLYIS Sbjct: 613 GVIPAAPMDEG--MLSDEERDVLSAAGIELAPTTRQTLLEEQFVMYQMVTRATEKLYISC 670 Query: 732 IGRSIQDNSERFPSVLVQELIDYIG---QSHYLPGDEALNCDESEARVKAHLTCL----H 784 + S ++++ + L+ E + V L Sbjct: 671 PLADE-EGKTLLASSFIKKIKRMFPDVIDTFITNDVNDLSRSEQISYVATPEVTLSYVMQ 729 Query: 785 TRMPFDPQNYQPGERQSYA--REWLPAASQAGKAHSEFVQPLPFTLPETV---------- 832 + ++ + ++ + K+ + + Sbjct: 730 QLQTWKRYGFEGNLDFWWDVYNFYVTSDEWKQKSSRVLSSLFYRNRAQKLSTAVSRDLYG 789 Query: 833 -----PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNA 887 + ++ F F Q L + R F L+ ++ L Sbjct: 790 DKIKGSVSRMELFNRCAYAHFAQHGLSLRERD---------IFKLDAPDIGELFHAALKR 840 Query: 888 LVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ 939 + A+RL R R DL E +E+ L R I Sbjct: 841 I-----ADRLLRENRTWADLSIKEC-EHLSAVVIEEIAPLLQRQILLSSNRH 886 >UniRef50_Q18AP0 ATP-dependent helicase/deoxyribonuclease subunit B n=9 Tax=Clostridium RepID=ADDB_CLOD6 Length = 1155 Score = 308 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 98/693 (14%), Positives = 224/693 (32%), Gaps = 112/693 (16%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDS---SITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 R ++ R N P + +I ++ EVE + ++ ++ D + Sbjct: 281 RFEKVKELQHLERFYNAYPYKIYSNPTENIKIKEFNNLYSEVEEIAREIVHLV-RDKNVR 339 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 RDI + D++ Y + ++F +P I +R +S+P++ IS L + + R Sbjct: 340 YRDITIATRDLNRYDFLVHSIFNEY----NIPNFIDKKREAKSNPIVILIISALEMKNRR 395 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + E + L ++ I + + L +V +GI+ G + + W Sbjct: 396 YGYETMFRYLKSGLI----GIDNDDINLLENYVLANGIK-GKKWFDEK-----------W 439 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV----------GHLASLLMQLNIW 574 + +T+ L G ++ E + +E + E + + + + + Sbjct: 440 DYRITQSLSGQ---ESEFELELKEKINEIKNRVLEPIVILQEKLRGKNRVKEICRYIYEF 496 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 + +E + +D + + + + I+ + + + + L Sbjct: 497 LLDINMPETIESLIVNFKD------KGELDVANQYSQVWDIVVDILDQMVELMGDEIISL 550 Query: 635 SLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 + D+ + + V + ++ M++ K + L+G DGV+P G Sbjct: 551 EKFIKLITLGFDEYELGLVPPSIDQVLVSSVDRMKNPDTKYLYLVGTTDGVFPLITKDSG 610 Query: 694 FDLMSQKPKRGD---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 + + G+ ++R ++++L +AL S + L I+Y S + P Sbjct: 611 ILSDNDRESLGNKGIEVDIDSKTRSFEEQFLVYKALTSTSKNLTITYP-ISDHEGKTLRP 669 Query: 745 SVLVQELIDYIG---QSHYLPGDEALNCDESEARVKAHLTCLHTR----MPFDPQNYQPG 797 S+++ L YL + + ++ + +D Y Sbjct: 670 SIIISRLKKIFPNIENKSYLVEENKNTDKDILKKITVKSPTFNELINVIKNYDSDGYNTE 729 Query: 798 ERQSYA---REWLPAASQAGKAHSEFVQPLPFT---------------LPETVPLETLQR 839 E S + + ++ L +T ++ + L++ Sbjct: 730 EINSIWLDIYRYYLKDEIYSSITKKVIKGLSYTNQVHKIEEKKIRSLYKSNSLSISRLEK 789 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSE-IPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF 898 + P F Q L+ R E S PD FI L R+ ++LL + D + + Sbjct: 790 YAECPFAYFIQYGLKAKKRKEYSFTPPDLGTFIHNILDRFS--KELLQDNLTWRDIDEKY 847 Query: 899 RRFRAAG-------DLP---------YGAFGEIFWETQCQEMQQLADRVIACRQPGQSME 942 + +P Y + ++ ++ E Sbjct: 848 IELKIGIIVDEIILKIPGYILNSSERYKYLAYRLKNMLTTAITIISQQIKQGSFEPIDYE 907 Query: 943 IDL--------------ACNGVQITGWLPQVQP 961 + V + G + +V Sbjct: 908 VKFGDNGKYPPIKMVLENGQEVSLIGQIDRVDE 940 >UniRef50_A6LPC3 ATP-dependent helicase/deoxyribonuclease subunit B n=7 Tax=Clostridium RepID=ADDB_CLOB8 Length = 1159 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 91/576 (15%), Positives = 194/576 (33%), Gaps = 63/576 (10%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 + I + +IE++ S D SIT + + E+E + + +++ E Sbjct: 276 NAIPYRFKGNLELDHIEKYFFSYPFNEYDKNPESITLYKASNIYDEIERVSKSITSLVRE 335 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 + RDI V+ +ID Y I +F +PY + + S+P++ S Sbjct: 336 N-GYRYRDISVVCRNIDDYEKIISVIFKDY----NIPYFLDKKIQLLSNPLIVLISSAFE 390 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + + E V L + I + L ++ E G++ G + + Sbjct: 391 ILLKNWSYESVFKYLKSGLT----GIDNSYIDRLENFILEYGVK-GYKWTSKEIVNEKWF 445 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 + ++L+ ME + + +++ +G + + + + + Sbjct: 446 RGNG-ELTDDKVLIAEIMEEIRYPLMTF--HNKVNGKH-----KVKDICSAIYEFLVDVK 497 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 + EW+ ++ + + +E II + + + + S Sbjct: 498 VFDRINEWIKNFEEL------GLEDKVKEYSQVESIVIDIIDQAVDVIGEERLEYSEFFR 551 Query: 640 ELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 L+ E I +A VNI + ++ KV+ ++G+NDGV P G Sbjct: 552 ILSSGFANEEIGIIPVALDQVNIGDIARIKGRDVKVLYIVGINDGVLPASKKEEGLLSDR 611 Query: 699 QKPKRGD---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 + G+ R++ +++YL AL + + L +SY + PS+++ Sbjct: 612 DRTTLGEVGINLSSTTRNKVFEEQYLLYMALTISSEYLMLSYPMADF-EGKSLRPSIVIS 670 Query: 750 ELIDYIGQSHYLPGDEALNCDES-EARVKAHLTCLHTRMP-----FDPQNYQPGERQSYA 803 + L E+ ++ A + + + FD + +P + Y Sbjct: 671 RIKKIFPNLIEESAIYDLKILENKFGKIIAPIPTFNELIISMRKDFDKEYIEPYWSEVY- 729 Query: 804 REWLPAASQAGKAHSEFVQPLPFT-------------------LPETVPLETLQRFWAHP 844 EW + + L ++ + L+++ P Sbjct: 730 -EWFKNNDEFRDKVKNIFKGLSYSNIGDKVSKNKLRKLYQNDLEKLVFSVSKLEKYAECP 788 Query: 845 VRAFFQMRLQVNFRTEDSE-IPDTEPFILEGLSRYQ 879 F Q L+ R PD F+ E L + Sbjct: 789 FSYFVQYGLKAKNRKVYEFTPPDLGSFVHEMLDSFT 824 >UniRef50_C6CTT5 ATP-dependent nuclease subunit B n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTT5_PAESJ Length = 1175 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 94/632 (14%), Positives = 198/632 (31%), Gaps = 82/632 (12%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 ++ H + + EVE ++ + L RD+ VMV + Y+ +IQ +F Sbjct: 319 LSLHASANRRAEVEAAARDMVRR-AREEGLRWRDMAVMVRNAAEYTDYIQTIFDDYE--- 374 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD-ITEEGLRY 492 +PY + + HP++E S L + E V + +L ++ E Sbjct: 375 -IPYFLDQKNNTVHHPLVEFIRSALETVLHGWHYEAVFRCIKTELLFPIDGSMSRELFDR 433 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L +V +G+ G + + + ++E + Sbjct: 434 LENYVLAAGVD-GWKWLDRSRW---------------KPFMQQSLEDEPDTVSEPSAKAK 477 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD---------- 602 +++ L + + L + +++ +L+ D Sbjct: 478 REFQAIMAARE--AIVPPLRRFEQSLKKASNVKDMCEALYKLLDHADAADRLERWSREDS 535 Query: 603 ----AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-G 657 + + + ++ + + + +P L + L+ +++ A Sbjct: 536 ASGRTQRARSHRQLWDGVMQLLDQLVEMVGDEDMPPELFAGMVETGLENLKLAAVPPALD 595 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK---------RGDRSR 708 I ++ RS K+ +LG NDGV P ++ G ++ + G R R Sbjct: 596 QALIGSMDRTRSGDVKICYVLGANDGVMPMRIQEDGVLTEQERERLAEEGLVMAPGVRRR 655 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 D+R+L AL +A Q L+IS+ + PS +++++ Sbjct: 656 LLDERFLIYNALTTASQHLWISWAQADE-EGKTLLPSEVIRQVRQLFPGIPVYQKAGEPT 714 Query: 769 CDESEARVKAHLTCLHTRMPF--------------DPQNYQPGERQSYAREWLPAASQAG 814 ++++ + + P + + EW Sbjct: 715 PGMETGDQRSYIEHPQRTLAYLITELRAWRQGSEIAPFWWDVYNWFAIRPEWQDKLQLMN 774 Query: 815 KAHSEFVQP--LPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDS-EI 864 + S Q L T E + + ++RF + P + F L++ R E Sbjct: 775 ASLSFSNQETVLTTTTAEQLYGTKLKASVSRMERFVSCPFQHFAIHGLRLRERQMYRLEA 834 Query: 865 PDTEPFILEGL--------SRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 PD L R+ + + L R ++ L G F I Sbjct: 835 PDVGQLFHAALSRLAGGVGQRWGSMPEAQIREAAAKAVDELAPRLQSQILLSSGRFQYIA 894 Query: 917 WETQCQEMQQLADRVIACRQPGQSMEIDLACN 948 + + Q A + + Q + L + Sbjct: 895 R-KLKEIVAQAAVILSEHSRRAQFQPVGLEVD 925 >UniRef50_Q8ERW6 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Oceanobacillus iheyensis RepID=ADDB_OCEIH Length = 1166 Score = 305 bits (781), Expect = 7e-81, Method: Composition-based stats. Identities = 116/628 (18%), Positives = 221/628 (35%), Gaps = 77/628 (12%) Query: 318 ESSQELDAFVDVTPD-NLLHNIQSD---------ILE-LENRAVAGVNIEEFSRSDNKRP 366 E + ELD F + ++L + + IL+ LE + + RP Sbjct: 245 EDASELDLFYQPSQTYHVLKQLAWEAGVPVEDPIILDTLEGNFQNRPYFAHMEKYFDSRP 304 Query: 367 LDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 + I P+ EVE + ++L ++ D RDI +++ + Y I+ Sbjct: 305 APAYEGEVPIEIFEAVHPRAEVEGIAQQVLELI-RDNRYRYRDIALLIRQPEVYHDLIET 363 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA---A 481 +F LP I ++R HP++E S+L + + ++ + +L ++ Sbjct: 364 IFNDYE----LPVFIDEKRPMLHHPLIELIRSILEVVQGNWRNDAIFRVLKTGLIPSADD 419 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 F +T + + L +V E GIR G++ W++ R A + Sbjct: 420 EFPLTMDSIDQLENYVIEFGIR----------SRHQWIGENKWKYQRFRGFDSSAQTDRE 469 Query: 542 GEWQSVL--PYDESSGLIAELVGHLASL--LMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 E Q + D+ IA + L + + L I +E + + L V R + Sbjct: 470 RELQESMNRYRDQVISAIATVDEQLRAATTVKDLCIAMYQWLEELKIPDQLEVTRKYYDD 529 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA- 656 LP+ E + + E + + + LS+ + L ++ + S + Sbjct: 530 QGLPEKGREQE--QVWDAVIQLFDEMVEIAGEEKMDLSVFQVALDAGIETLQFSHVPPSM 587 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF-------DLMSQKPKRGDRSRR 709 + + T+ R + LLG+N+G++P + G L K D S R Sbjct: 588 DHIIVGTIDRSRMSNIRCAFLLGVNEGIWPMKPTSDGMIDEAERLLLEQNGLKLADTSER 647 Query: 710 D--DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG--QSHYLPGDE 765 DD + A A+ +L ISY S ++ + PS L+ + + ++H L D Sbjct: 648 QLLDDWFYMYLAFTVAKDRLKISY-LLSDEEGKAKMPSQLIHRVEELFPATKNHILLQDP 706 Query: 766 ALNCDE---------SEARVKAHLTCLHTRMPFDPQNYQPGERQSYA-------REWLPA 809 + S + + A L P DP ++ + L Sbjct: 707 EDESNTRRFVSTELKSRSALTAQLAKFKKGYPIDPIWWEVYQWYVEHHPQGGTTHRVLQG 766 Query: 810 ASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 K S + P+ + + L+ ++ + F + L + R Sbjct: 767 LHYENKPESLQKDTVEQLYPKRIQASVSRLETYYRCSYQHFAKYSLNLEERRTYK----- 821 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAE 895 L+ Q+ + L + E AE Sbjct: 822 ----LDAPDIGQLFHEALKKITEWIHAE 845 >UniRef50_B9E0C6 ATP-dependent helicase/deoxyribonuclease subunit B n=3 Tax=Clostridium RepID=ADDB_CLOK1 Length = 1150 Score = 305 bits (780), Expect = 9e-81, Method: Composition-based stats. Identities = 98/644 (15%), Positives = 204/644 (31%), Gaps = 90/644 (13%) Query: 311 IYLLSDLESSQELDAFVDV---TPDNLLHNIQSDILELEN---------RAVAGVNIEEF 358 + L + + +D F+ + + L +++I+ + R ++ Sbjct: 230 MDALGEYSERESIDLFLPIKITERNILQIAEKNNIIYQKPVNLRCSPCYRFKNSTALQHL 289 Query: 359 SRSDNKRPLDPLDSS---ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 S P + S I + E++ + ++ D L +D+ V+ D+ Sbjct: 290 QHSLFSYPYKNYEKSTEDINIFKALNKYTEIDYIARDIVKAC-RDKNLRFKDMAVVTGDL 348 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 D Y I+AVF +PY I +R + ++ IS + + + E V L Sbjct: 349 DEYENLIKAVFNQYD----IPYFIDKKREIIHNQIVILIISAVEILAKNWSYESVFRYLK 404 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 +L D+ + + L +V +GIR W F + G Sbjct: 405 TGLL----DLEFDDIDILENYVLANGIR-----------GRQWLDTKPWSFKIN---YGN 446 Query: 536 AMESAQGEWQSVL-PYDESSGLIAELVGHL----------ASLLMQLNIWRRGLAQERPL 584 E E Q L + + E + L + +L + L + Sbjct: 447 FKEDDSEEEQEYLNKINCIRDKVREPILKLSNDIKGKKKGRHICEELYNFLCELKIPEKV 506 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 EE + R+ + + I ++ + + + + + + L Sbjct: 507 EELIIEFRN------TDRLDKANEYSQIWDIVVDVLDQIVDVLGEQSFGMEIFNEALEIG 560 Query: 645 LDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK- 702 Q I A V + + ++S + + G+NDG++P ++P G + + Sbjct: 561 FSQYEIGVIPPALDQVLVSNITRIKSYNISALYIAGVNDGIFPVTISPEGIFTDQDRDEL 620 Query: 703 --------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 RSR ++++L L + L ++Y S ++ + PSV++ + Sbjct: 621 KQNGLEIAPNTRSRAFEEQFLIYATLTIVDKYLTLTYS-MSDEEGKAKRPSVVISMIKKI 679 Query: 755 IGQSHYLPG-DEALNCDESEARVKAHLTCLHTRMPFDPQNYQP----GERQSYAREWLPA 809 + +A + V + + + +N W Sbjct: 680 FPKLQEKSNLLDASGYEGGIEAVNSPKVTFNMLISNIRRNLGHRENINSLWIDVYRWYRE 739 Query: 810 ASQAGKAHSEFVQPLPFTLPETV----------------PLETLQRFWAHPVRAFFQMRL 853 K + + + + L++F P F Q L Sbjct: 740 HEIWNKRLDTVLGAFYYNNEIKISDLVKIRRLYGKHLNMSVSRLEKFAQCPFGYFVQYGL 799 Query: 854 QVNFRTEDSEI-PDTEPFILEGLSRYQINQQLLNALVEQDDAER 896 +V R S PD F+ L R+ I L + ++ + Sbjct: 800 KVKDRKMYSLSAPDLGSFMHGILERFSIG--LKQKSLTWENVDE 841 >UniRef50_Q0SWW7 ATP-dependent helicase/deoxyribonuclease subunit B n=9 Tax=Clostridium perfringens RepID=ADDB_CLOPS Length = 1158 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 87/578 (15%), Positives = 200/578 (34%), Gaps = 61/578 (10%) Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 DI +IE + + ++S+ + ++ E+E + +L ++ + Sbjct: 273 DIPYRFKENKELAHIERQLYAYPFKQYRGENNSLRLYRANNNYDEIEFVAKDILRLV-RE 331 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 +DI V+ ++D+Y I A+F +PY I + S+P++ S + + Sbjct: 332 KQYRFKDISVICREVDNYEKVISAIFAEYE----IPYYIDKKIDIASNPLIVFINSAVDI 387 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGL-RYLRQWVNESGI---RWGIDDDNVRELEL 516 + E + L ++ I L L +V GI +W + N L Sbjct: 388 ISKNWTYESMFKYLKTGLIKEFRGIEGAELIDELENYVLAYGIKGKKWMEEWVNYSSSIL 447 Query: 517 PATG-QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 + L R+ ++++ + + L + L + Sbjct: 448 KEEEISEENKQRLERL---------NDIRETIVTPLDEFNKECKGKKTLKEFAIILYEFL 498 Query: 576 R-GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 L +++++ ++ N + + + + ++ + + + + L Sbjct: 499 DSKLNIMDTIDKYVEYFKE--NDMAI----EAKEYSEVRDIFIDVLEQAVDVLGNEVMDL 552 Query: 635 SLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L L Q + +A VNI + ++S K + ++G+NDGV P G Sbjct: 553 DEFMKVLNIGLSQYEMGLIPVALDQVNIGDITRIKSRGTKALYIIGVNDGVLPSASKEEG 612 Query: 694 FDLMSQKPKRGD---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 + + + R++ ++++L A A++ L ++Y + + P Sbjct: 613 ILSDNDREILLEKGISLASDTRTKIFEEQFLVYTAFTIAEEYLVVTYPLADF-EGKSQRP 671 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP---GERQS 801 S++V L + + + ++ ++ A + L+ M +NY + Sbjct: 672 SIIVHRLKKILP-NVKEESEGFKLVNDKYDKISAKIPTLNELMIAIRKNYDGAEIDDYWK 730 Query: 802 YAREWLPAASQAGKAHSEFVQPLPFTLPE-------------------TVPLETLQRFWA 842 Y +W + + + L +T E ++ + L+R+ Sbjct: 731 YVYDWYLREPKWKERIEYVRKGLEYTNLENNISKEKAKKLYEDNKNKISLSVSRLERYAQ 790 Query: 843 HPVRAFFQMRLQVNFRTEDSEI-PDTEPFILEGLSRYQ 879 P + Q L+ R PD F+ E L + Sbjct: 791 CPFAYYIQYGLKAKDRKIYEFTAPDLGSFMHEILDEFT 828 >UniRef50_B0SIS7 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SIS7_LEPBA Length = 1099 Score = 298 bits (764), Expect = 7e-79, Method: Composition-based stats. Identities = 157/989 (15%), Positives = 326/989 (32%), Gaps = 160/989 (16%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF--GIAAN 59 + + L + + + +++E++++P +++V +T + WL++ + + ++ N Sbjct: 3 IHYFAGLHLHEITSELTKQIKKEQIENPLRMPLVVVPNTNLIPWLKLNIPKYNDSQLSIN 62 Query: 60 IDFPLPASFIWDMFVRVLPEI---PKESAFNKQSMSWKLMTLLPQLLER--EDFTLLRHY 114 I+F I M L ++ S L + ++ ++ Y Sbjct: 63 IEFTFLEKAILKMIFTSLQIPAWAESVEFYDYNSFKKDCFRYLYENQTSLFQNHPEIKTY 122 Query: 115 LTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQW---ETGHLVEGLGEAQAWQAPLWKA 171 + S+ KL+ LS F Y + R +W+ QW E ++ L W Sbjct: 123 I---SELPKLYYLSDLLTKYFKDYELNRSEWIHQWLGNEKSNIPNQLTSDPYWD------ 173 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 +E LG + NLY L + +S L Y+ L+ + Sbjct: 174 -LEKEIYLGTNDGGKKNLYYYL------NKGKDLSLQGNLHFFCLSNLSGTYINFLKTVS 226 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 K NP + + + +N + N Sbjct: 227 K---------NP-------------------NANLNIYIYQFHNGKVIGQNPEKTKNYLS 258 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 + LA +++ L E+S +L ++S +LE + + Sbjct: 259 KFAKPQSYLA------KEFSNLTKQKETS-------KYASGGMLAKLKSILLEEQVKEEN 305 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT-LTPRDIIV 410 + D ++ S RE+E + +L + L+ D + Sbjct: 306 YL----------------NDQTVRVWNAPSEYREMESIAHDILHKISTSKGNLSLLDFAI 349 Query: 411 MVADIDSYSPFIQAVF----------GSAPADRYLPYAISDRRARQSHPVLEAFISLLS- 459 +V + + Y I+ VF P + L Y++SD A+++ + + F L Sbjct: 350 LVPNTNDYKAAIEWVFHGGIYTTQRIDETPTLQRLNYSLSDLVAKETSLLYKVFEILFQS 409 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITE-EGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + R ++++ LL P++ + I + + Q ++ G + + Sbjct: 410 FLNKRIQKDELIHLLQNPLITGKNKIDSIDQTHSVIQLLDSLGSLYDENK---------E 460 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQ--SVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 +T FG+ R +L M W V+ + + + + L + Sbjct: 461 ENPYTISFGVKRAVLS-VMSDEATTWSHMGVITDPLAKEDSVLYLNLIWEEIKSLQSFFE 519 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 + P+ E + N F ETE + +W IA+ ++ Sbjct: 520 SEFLQLPINERFKAFQTKWNQFLKFSEETENE-RIYLTEWLGNIAKWCDTEWNHVTDFLQ 578 Query: 637 LRDELAQRL--DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 + + + +L + I L PMR IPF + ++G+ +G +P F Sbjct: 579 FLQLQTEEIFSNIPTQKGNYLTEGITISLLQPMRPIPFSHIYIVGLGEGKFPGSKDVSRF 638 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 +L K D +R + L E ++SA+ + SY+G++ ++ E P + E++ Sbjct: 639 NLRKNDSKPWDLNRIEIQESLLWETILSAEDSITFSYVGKNTLEDKEFEPCSSLFEVMHS 698 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA-----REWLPA 809 +G P+ SY +++ Sbjct: 699 LGIERATEI---------------------PLTPYSRFY-DREILHSYDYSRNLKQYRSL 736 Query: 810 ASQAGKAHSEFVQPLPFTLPE-----TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 + K ++ LP E + + ++ + +P+ + + L F ++ E Sbjct: 737 NTDLPKPDFTSLEDLPLPHSEWKFKKQISIASIASAFKNPILPYIKENLG--FMEDEEET 794 Query: 865 PDTEPFILEGLSRYQINQQLLNALVEQDDAE---------------RLFRRFRAAGDLPY 909 EPF L + + L E E + PY Sbjct: 795 SLEEPFYFNALETFLFKSKFLPLFTESLAKEETWPWDKDTIKQKINEFSAIAENKAEFPY 854 Query: 910 GAFGEIFWETQCQEMQQLADRVIACRQPG 938 GAF + ET +E+ ++A+ + Sbjct: 855 GAFHLVTTETLLEELTEIAEVYKTLKGEL 883 >UniRef50_A1HTK8 UvrD-like DNA helicase, C terminal n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTK8_9FIRM Length = 1160 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 173/1023 (16%), Positives = 305/1023 (29%), Gaps = 196/1023 (19%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMF 73 + + + P +++V Q + L+ G++ + + + Sbjct: 19 LDAIRERLRQAPDGPPL---LLIVPEQATFQ-AERELAATPGLSGFVRAHVMG--FRRLA 72 Query: 74 VRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQ------- 126 RVL E +A P L + +LR LT+ D+ KL Sbjct: 73 YRVLAETGGGAA--------------PHLTDLGKRLVLRRLLTERRDELKLLGQAAAQRT 118 Query: 127 LSSKAADL---FDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPR 183 + A L F Y + PD +A L A L+KA ++ Sbjct: 119 FADTLASLIWEFKTYGIA-PDKVAAASERLGATPLAAKLHDLALLYKAFEDFLQGRYTDP 177 Query: 184 WHRANLYQRFIETLESATTCPPGLPS--RVFICGISALPPVYLQALQAL---GKHIEIHL 238 L +A L V++ G P L+AL K + + L Sbjct: 178 ED--------CLRLLAAKIPAATLTRGAEVWVDGFEWFTPQEYGVLEALLSAAKDVTVTL 229 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 P D A L R + R Sbjct: 230 CLDEP------DAPHHADETALFHRSWKTRQSLRARA----------------------- 260 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 A G R+ + Q+ IL R Sbjct: 261 --ARLGVSCRE--------------------EVLTAVRRFQAPILAYVER---------- 288 Query: 359 SRSDNKRPLDPLD-SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 +D + P D +T + + EVE + ++ + D RD+ V++ D+D Sbjct: 289 YANDARPPAWRGDKQGLTIAEAANRRTEVEGIARDMIRLC-RDEGYRWRDMAVLLRDMDG 347 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 Y ++ V +P+ +R HP+ E S L + R+ E V L Sbjct: 348 YIDLVETVLADYD----IPFFSDRQRPAVHHPLAELIRSALEVVTERWAYEPVFRCLKTD 403 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + F ++ + + L +V E GIR T W F + R+ L Sbjct: 404 L----FPLSRDEIDLLENYVLEFGIR-----------GSRWTKDEPWTF-VRRLSLD--- 444 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASL-------------LMQLNIWRRGLAQERPL 584 E A+ + + D + + L L L L Sbjct: 445 EDAEPDERQQAYLDRINAIRCRAAKPLIRFEQALTQAETVREMTAALYGLLADLDVPATL 504 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 E+W D E E I ++ + + + L+ + + Sbjct: 505 EKWAAAAST------ARDPEQEREHRQIWHSIVDLLDQIVDTCGEQPMSLTDYAAVVNEG 558 Query: 645 LDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK- 702 L+ + V + L R + KVV L G+NDGV P + G L+S + + Sbjct: 559 LEGLTFNIIPPGLDHVTVTPLTRAR-LAAKVVYLPGVNDGVLPERGREEG--LLSDRERA 615 Query: 703 -------RGDRSRRDD---DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 +R D ++++ AL A +L++S+ + PS++++ L Sbjct: 616 ELASLGLELGPTREADVFAEQFVVYTALTRASDRLWVSFPLADA-EGKALAPSLIIRRLK 674 Query: 753 DY--IGQSHYLPGDEALNCDE--------SEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 + I LP + ++ S A + A L P Sbjct: 675 ELSGIEALKPLPVEPPPGAEDEYIVHPRRSLAALAAGLRPALAGQPVGTLWRDLYNWAVA 734 Query: 803 AREWLPAASQ--AGKAHSEFVQPLPFTLPETV---------PLETLQRFWAHPVRAFFQM 851 + + AG H Q LP L + + + + F A P + F + Sbjct: 735 RPDLAADLRRAVAGLFHRNQEQALPPELAQRLYRRQGKLRGSVTRFEGFQACPFQHFARY 794 Query: 852 RLQVNFRTEDSEI-PDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYG 910 L + R PD F L ++ + +E++ RR++ GD+ Sbjct: 795 GLALKERAVAQLKAPDFGQFFHAALRQFGLR-------IEKELTADNQRRWQRWGDVQDE 847 Query: 911 AFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPS 970 G + + +L + ++ Q I V+ D R++P Sbjct: 848 EIGPLCEAIVQELAPKLQNEILLSSA--QYRSITRRLQRTLQRTVTRLVRLDRRSRFKPV 905 Query: 971 LLS 973 L Sbjct: 906 ALE 908 >UniRef50_B2A611 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=ADDB_NATTJ Length = 1186 Score = 293 bits (749), Expect = 4e-77, Method: Composition-based stats. Identities = 164/1074 (15%), Positives = 320/1074 (29%), Gaps = 202/1074 (18%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPA 66 S + + + ++ DP + LV Q ++ + ++ I+ Sbjct: 12 SGKTSYIIDSITEQLKAAPDGDPI---IFLVPEQATFQ-MEQAILRRSDIS-GFSRLHIL 66 Query: 67 SFIWDMFVRVLPEI-----PKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 SF + +VL E S K+ + ++ L ++D +L Sbjct: 67 SFQ-RLSQKVLEEQGGIAKADLSDTGKEMIIKNIL-----LQRKDDLEILEKVAVKSG-- 118 Query: 122 RKLFQLSSKAADLFDQYLVYR--PDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 S K + L + +Y P+ L Q + L + + + + Sbjct: 119 -----FSEKLSRLISEARMYEITPEMLEQISQELDLIHLKQKL-------QEISQVFTDY 166 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRV--------FICGISALPPVYLQALQALG 231 H+ +Q + L A G + + +I G S P L+ L+ L Sbjct: 167 ETFLQHQGYHHQE--DRLSKAGQKMEG--NNISFLAGSTCYIDGFSGFTPQELKLLEGLL 222 Query: 232 KHI-EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 I L T P + G I D +L + +E ++ ++ Sbjct: 223 TKCSNIELALTLP-PQFTGKIDDELHLFHPTLKTYNQVWELAVNNDIEIKKSKHFPNENE 281 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV 350 + + L R Sbjct: 282 EHR-------------------------------------SASSL-----------PRFK 293 Query: 351 AGVNIEEFSRSDNKRPLDPLDSS---ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 + + K ++P DS ++ + + E++ + + +L D + +D Sbjct: 294 DNPALAHLEKEWGKNKINPYDSEPTGLSIVEGTNLRNEIDKIAREI-KLLVRDHGMRYKD 352 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 I V+V +++SY P I+AVF +P+ + + HP++E S + S + Sbjct: 353 IAVIVRELESYEPVIKAVFNDY----KIPHFLDRKEPVHHHPLVEFLRSSVETVISNWDY 408 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT-------- 519 E + +L +L I+ E + + +V GI G D + A Sbjct: 409 EPLFRMLKTGLLP----ISSEEIFQVENYVLAHGIS-GKDWKKQGKWNFIANFDLERENI 463 Query: 520 -----------GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL--AS 566 ++ + G R L +G +S + AE L Sbjct: 464 APSNRNKQYLSEINSIK-GKVRDTLLEFDSKLRGINKSESLSAQFKNQEAEEDNLLSVRE 522 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 + L L E LEEW L A D + ++ + + Sbjct: 523 ISTYLWELIEQLQIEYQLEEWS------LEAEERKDFVEMQLHNQLWDTVIDLLDQMVTF 576 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 V LS + L ++ V + T R KV+ + G++DG+Y Sbjct: 577 LGEQKVTLSEYLQIIESGLANIKLGLLPATLDQVLVGTADRSRYHEIKVLFMAGVSDGLY 636 Query: 686 PRQ-------LAPLGFDLMSQKPK--RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 P + L + + ++YL L QKLY+SY Sbjct: 637 PAKIDDDGIIDDRERITLRQHDVEFAPTTEQKLYQEQYLIYNVLTQPSQKLYLSYPAAD- 695 Query: 737 QDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE------------ARVKAHLTCLH 784 + PS ++ ++ + + ++ DE +K H Sbjct: 696 SEGRTMSPSTIISDIQEMFPELFQEYQNDGPENDEDFRQYIIDGKKAVSNLIKLINKVGH 755 Query: 785 T------RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV--PLET 836 + Y+ + A + + P + + Sbjct: 756 PEKLAEDKQQLLAYLINEHPDLFYSTPEIKALDYKKSLSPLTQEVIDKLYPNKIATSVSG 815 Query: 837 LQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT-------------EPFILEGLSRYQINQQ 883 L+ F P R F + L++ R P + + L+ +++ + Sbjct: 816 LESFCQCPFRHFAEQNLRLKEREYFRLEPASLGLFYHAGLKLFWDKLQENNLTWHKLKTE 875 Query: 884 LLNALVEQDDAERLFRRFRAAGDLP---YGAFGEIFWETQCQEMQQL------------- 927 ALV + E L R + L Y F + E + ++ L Sbjct: 876 EREALVSEI-VEVLSERLKNRILLASERYKYFKKKLHELLSRAVEVLSWYSDDKGFYPVG 934 Query: 928 ADRVIACRQPGQSMEIDLAC---NGVQITGWLPQVQ---PDGLLRWRPSLLSVA 975 ++ +P ++E++L VQ+ G + ++ DG L R Sbjct: 935 SEIGFGKDEPLSTLELELPSFPNKKVQLKGRIDRIDTGKKDGDLYLRVIDYKGK 988 >UniRef50_B0KDB8 ATP-dependent helicase/deoxyribonuclease subunit B n=10 Tax=Thermoanaerobacteraceae RepID=ADDB_THEP3 Length = 1149 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 83/571 (14%), Positives = 188/571 (32%), Gaps = 72/571 (12%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 + +E+ S + +I+ + EVE ++ ++ D L Sbjct: 279 EKNEEMAFLEKHLFSYPYKIYSKDTKNISLFKAVNVYSEVEETAREIIRLV-RDENLRYS 337 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 DI+V D+ Y I+ +F +P+ I + +++P++ SL + + Sbjct: 338 DIVVTARDLKRYHKLIKTIFSHYG----IPHFIDLKLDIKNNPIIVYITSLFEIYLKNWS 393 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 E V L ++ +E + +L +V +GI+ G + + +++R Sbjct: 394 YESVFRHLKTGFT----NLNKEDISFLENYVLANGIKGGKWKEEWK---------YSFRN 440 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA----------SLLMQLNIWRR 576 L ++ Q E +++ + I+E + L + Sbjct: 441 RLDKLF------DDQDEKEALEKVNTIKNGISEPLNKFYKDFSNANTVREACEILYNFLV 494 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 + +E + ++ + E + I ++ + + + + + L Sbjct: 495 ERDIPQRIENLIREFKE------NKEFEIANQYSQIWDIVVDVLDQMVEVMGEEKINIDL 548 Query: 637 LRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 L + +I A V + ++ M+S K + ++G NDG++P G Sbjct: 549 FSKILDIGFEAYQIGSIPPALDEVLVTSVDRMKSHNAKALFVIGANDGIFPASSFEEGIL 608 Query: 696 ------LMSQKPKRGDRS---RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 +++ DR + ++++L AL S + L ISY + PS+ Sbjct: 609 TDEDRQILTSYEVELDRDTKAKVFEEQFLVYTALTSTSKFLRISYPIAD-HEGRSLRPSI 667 Query: 747 LVQELIDYIGQSHYLPGDEALNCDE-----------SEARVKAHLTCLHTRMPFDPQNYQ 795 ++ Q ++ DE + + + + Sbjct: 668 IISRFKRIFPQITQFSNVIEMDTDEENLHRVSSPDPTFNEMIKSFKEWDIKDKINSLWLD 727 Query: 796 PGERQSYAREW-------LPAASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVR 846 S W L + + + + + + + L+++ A P Sbjct: 728 VYNWYSNKEVWRKRIEKVLEGFNYSNQVRVIPSAKIKRLYKDEINFSVSRLEKYAACPFA 787 Query: 847 AFFQMRLQVNFRTEDS-EIPDTEPFILEGLS 876 F Q L+ R S + PD F+ L+ Sbjct: 788 YFVQYGLKAKERKIYSFDPPDLGIFMHNVLN 818 >UniRef50_Q24WW7 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Desulfitobacterium hafniense RepID=ADDB_DESHY Length = 1220 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 114/681 (16%), Positives = 211/681 (30%), Gaps = 91/681 (13%) Query: 350 VAGVNIEEFSRSDNKRPLDPLDSS-------ITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 ++E F + + D S I + + EVE + L L + Sbjct: 283 AGLKHLERFYNAYPTQTFPGGDDSTAPDPLGIALFPAANKRAEVEGVARE-LRRLAREEG 341 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 T RD V+ D+ Y I+ VF + +PY + +R HP+LE +S + Sbjct: 342 RTWRDCSVVTRDLPGYQGIIEQVFNA----HEIPYFLDHKRPVIHHPLLELLLSAIETVQ 397 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + E + L F +++ + L + GI N P Sbjct: 398 KDWAYEPLFRCLKTDF----FPCSKDRIDRLENYCLAYGIHGSAWKGNRSWSYYPDPNHK 453 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 GL + Q++ P+ E+ G +A + + L Sbjct: 454 EETAGLNE-TRQIIYDLFSPFDQAIRPHPEAGGPSV----TVAQITEAIYELLIRLKVPE 508 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 L+EW D I ++ E + + + LS L Sbjct: 509 HLQEWAEAAHS------RGDLAEAQLQNQIWDAVIQVLDELVAGLGEEVMDLSDFAMILT 562 Query: 643 QRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG-FDLMSQK 700 L+ ++ V + +L R+ V+ LLG NDG+ P + + G FD + + Sbjct: 563 SGLENLQLGLIPPGYDQVLVGSLDRSRNPETAVLFLLGANDGILPGKPSDEGVFDELERL 622 Query: 701 PK--------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 + + +++Y AL A+++LYISY + S ++ L Sbjct: 623 RLESKGIMLAPKGKVQVYEEQYFIYTALTRAREQLYISYPLTDE-EGRGLTVSPVIHRLK 681 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE----WLP 808 ++ L+ DE E H L Q + G S + W Sbjct: 682 MIFPGL----PEKYLSLDEEEPGALPHPYALLPAYALHLQKLRQGSSLSPLWQAIRLWFL 737 Query: 809 AASQAGKAHSEFVQPL-----PFTLPETV-----------PLETLQRFWAHPVRAFFQMR 852 + + A + L LP+ + + L+ F P F Q Sbjct: 738 SQTAAFPQVQLLEKGLRDQNEEGKLPQPLARQLYGKRLVTSVSRLELFARCPFAHFAQYG 797 Query: 853 LQVNFRTEDSE-IPDTEPFILEGLSRYQI-----------NQQLLNALVEQDDAERLFRR 900 L++ R+ PD F L Y I + + + + AE + + Sbjct: 798 LKLKERSNYRLSPPDMGQFFHAVLHDYAIALRERGLDWGELSKEQSWQLVNETAEPIALQ 857 Query: 901 FRAAGDLPYG---AFGEIFWETQCQEMQQLADRVIAC-------------RQPGQSMEID 944 + L T ++ L + ++ +E+ Sbjct: 858 LQNKILLSNARYRYLTHKLKRTVHHAVRVLGEHARQGVFLPMELEVKFGPQEALPPLEVP 917 Query: 945 LACNG-VQITGWLPQVQPDGL 964 L+ + + G + ++ L Sbjct: 918 LSGGNSLLLRGQIDRIDGAVL 938 >UniRef50_UPI0001850BBB ATP-dependent nuclease, subunit B n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850BBB Length = 1158 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 97/708 (13%), Positives = 201/708 (28%), Gaps = 107/708 (15%) Query: 336 HNIQSD--ILELENRAVAGVNIEEFSRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHD 391 IQ D I+ I R RP P + S +T +P+ E+E + Sbjct: 260 SQIQQDPMIVLDTQARFKSQTIAHLERHWETRPSVPSNESSYVTIVEAANPRAEIEGIAR 319 Query: 392 RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVL 451 + L + RDI + + + Y I+ +F +P+ + +R +HP++ Sbjct: 320 EI-RRLAREEGYRYRDIALFLRNSADYGDIIETIFYDYD----IPFFMDQKRTMLNHPLI 374 Query: 452 EAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT------EEGLRYLRQWVNESGIRWG 505 E S L S + E V + +L F + E + L +V GI+ Sbjct: 375 ELVRSTLETIHSHWRYEAVFRAVKTDLL---FPLDQSPKKLREKMDRLENYVLAYGIK-- 429 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS----------G 555 T + WR+ R L E + +E G Sbjct: 430 ---------GSSWTNKDRWRYRRFRGLELTDSPQTDEEREKEHEINELRLFISAPILRLG 480 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 + + + L + L + LE + D D Sbjct: 481 RRMKRGNTVRDYCISLYQFLEELDIPQKLERFAQSAND------RGDVIAAREHDQAWNA 534 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKV 674 ++ + + + + D L ++ + S + V + L R + Sbjct: 535 VVDLLDQYVEILGDSKISVKRFSDILDAGIETMKFSLVPPSNDQVIVADLELSRLANIRA 594 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS---------RRDDDRYLFLEALISAQQ 725 ++G+NDGV P + G + +R + +D+ ++ +A + + Sbjct: 595 GFVIGVNDGVLPSKFQDEGILSAEDRTSFANRGVQLAPTSTVKLEDEEFVAYKAFTTPSE 654 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN-------------CDES 772 +LYISY + + S ++ + + + + + S Sbjct: 655 RLYISYALAND-EGKALMSSPYIKRINELLPNIRTQLVVQEPSELHVKFQKSYASHPTVS 713 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH--SEFVQPLPFTLPE 830 + V L P + + + + + + L + Sbjct: 714 ISYVTTQLQLGLRGYQVAPVWWDVYNYYMKSSHYQEKVHRILTSLFYQNRTKKLSEETSK 773 Query: 831 TV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIPDTEPFILEGLSR----- 877 + + ++ F + P F L++ R E PD L Sbjct: 774 ELYGESILGSVSRMELFNSCPFSHFASHGLKLREREMYRLEAPDIGELFHGALKWISDMM 833 Query: 878 ------YQINQQLLNALVEQDDAERLFRRFRAAGDLP---YGAFGEIFWETQCQEMQQLA 928 ++ + + Q E L R + L + + L+ Sbjct: 834 NDQNRSWKDLNKADCRKLAQHAVEVLAPRLQKQILLSSNRHHYIKRKLELILERASLVLS 893 Query: 929 DRV-------------IACRQPGQSMEIDLACN-GVQITGWLPQVQPD 962 ++ L +++ G + +V Sbjct: 894 EQAKVSGFTPVGLELGFGPNGELPPFAFTLKNGIKMELQGRIDRVDKG 941 >UniRef50_B8DF43 ATP-dependent helicase/deoxyribonuclease subunit B n=16 Tax=Listeria monocytogenes RepID=ADDB_LISMH Length = 1157 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 84/701 (11%), Positives = 200/701 (28%), Gaps = 100/701 (14%) Query: 337 NIQSDILELENRAVAGVNIEEFSRSDNKRPL---DPLDSSITFHVCHSPQREVEVLHDRL 393 ++ + LEN+ ++ + + ++ H ++ + E+E + + Sbjct: 263 QVEENKFFLENKRAKTESLAFLANTWGHNKFMSFKNEPQNLKIHQANNRRAEIEGIAREI 322 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 ++ RDI ++ ++ Y + V + +P I +RA HP +E Sbjct: 323 RQLVLN--GYRYRDIAILTRNLGDYDVLCETVMEAY----NIPTFIDKKRAMAKHPFIEF 376 Query: 454 FISLLSLPDSRFVSEDVLALLDVPV---LAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 S L + E + + + + + L +V E+GI+ + Sbjct: 377 IRSSLDAILFNWKYEPIFQAVKTEFFFDITEKSSLNRRKADILENYVLENGIQNKWKWE- 435 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL------ 564 + W + R L + E +E LI + L Sbjct: 436 ---------KEGDWVYRKIRGLSTNVLPQTDEEIHMQSIINEMRSLIVNPLATLELNLRK 486 Query: 565 ----ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 + L + + LE W + E A++ Sbjct: 487 AKTGMEFALALYHYLEQVNAVERLESWRQRAEE------QGYLELAREHEQAWSSISALL 540 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLG 679 E + + + L + + LD S + V + + + + KV+ +G Sbjct: 541 DEFVEVLGEETLDLDSFTEIIGTGLDALEFSLLPPSLDQVVLSDMENAKLLDMKVIFAIG 600 Query: 680 MNDGVYPRQLAPLGFDLMSQK---------PKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 MNDGV P + G + K ++ ++ L + + KL++S Sbjct: 601 MNDGVMPLRQKDKGIFSDQDRDALRAEDSKLKPSAKNNIGEEDLLAYKIISLPSDKLFLS 660 Query: 731 YIGRSIQDNSERFPSVLVQELID---------YIGQSHYLPGDEALNCDESEAR----VK 777 Y + S ++++ Y+ L E + S+ + Sbjct: 661 YPAADE-EGKVLSESNYLRKIKGQFNELNESVYLTDPSLLSDAEQSSYIRSKQATLGLLT 719 Query: 778 AHLTCLHTRMPFDP-------QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE 830 + L ++ + A++ L + K E Sbjct: 720 SQLQMYKRGYTLSSVWWDAYNSYFENEKESIMAKQVLSSLYYENKTKPLQETTAKNLFGE 779 Query: 831 TV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT--EPFI-----------LEGL 875 T+ + +++F++ + + Q L++ R E F L Sbjct: 780 TIHASVSRMEKFFSCEFQHYAQYGLKLEERGHFQLQAVDMGEIFHGAMEWISAELKRNNL 839 Query: 876 SRYQINQQLLNAL--VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV-- 931 + ++ + + + + + L ++ Sbjct: 840 DWGNLTEEECKQMAKLAMTFLAPKIQHEILLSSKRMEYIQYKLLQIITRATTVLNEQAKS 899 Query: 932 -----------IACRQPGQSMEIDLACN-GVQITGWLPQVQ 960 + ++I L + + + G + ++ Sbjct: 900 SAFRPVGLEVDFGLKGDIPPLKIPLQSDSELLLQGRIDRID 940 >UniRef50_A7GAI7 ATP-dependent helicase/deoxyribonuclease subunit B n=15 Tax=Clostridium RepID=ADDB_CLOBL Length = 1150 Score = 288 bits (738), Expect = 7e-76, Method: Composition-based stats. Identities = 98/690 (14%), Positives = 218/690 (31%), Gaps = 83/690 (12%) Query: 321 QELDAFVDV--TPDNLLHNIQ-SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS---- 373 D F + T + LL I+ ++I + A+ F S + L+ S Sbjct: 240 DTTDVFSPIKNTENKLLQIIEDNNIKLDKPIALKCDPCARFKNSAELQHLEKNMFSFPYK 299 Query: 374 --------ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV 425 I + E+E ++ + D +DI V+ D++ Y I +V Sbjct: 300 EYKNETKDICMLKTLNQFTEIENTAKDIIKLCI-DKGCRFKDIAVITGDLEGYENIISSV 358 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 F +P+ I +R ++P++ +S L + + E V L +L DI Sbjct: 359 FLQY----NIPFFIDKKREINNNPIIVLILSALEVLSKNWTYESVFRYLKTGLL----DI 410 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 E + L +V +GI+ G N + E + + + LL + + Sbjct: 411 NNEEMDILENYVLANGIK-GYQWTNDKPWEHKSFSNYELEDQALKELLAKINDIRYKAME 469 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF-FLPDAE 604 ++ +++ + L + + ++ +M+ F + E Sbjct: 470 PIVTLNKNFKS----IDKAKEFCEVLYEFLCNINLPDKIQ-------NMIEDFKVEGEIE 518 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICT 663 + I ++ + + + + L L + I V + + Sbjct: 519 KASEYNQIWNIVMEVLDQIVEVIGEEKISLKEFFKILQTGFSEYEIGLIPPTLDQVMVGS 578 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD---------RSRRDDDRY 714 + +RS + ++G+NDG++P L G + GD +S ++++ Sbjct: 579 ITRLRSHNINTLYIVGVNDGIFPSPLKEEGILSDDDREFLGDKGLEIAKDTKSIAFEEQF 638 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP-------GDEAL 767 L L + + L +SY + PS+++ + +E L Sbjct: 639 LVYSTLTTPSKYLRLSYPIADG-EGKTLRPSIIISRIKKIFANICEENDIVKLNGEEEEL 697 Query: 768 NCDESEARVKAHLTCLHTRM----PFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 S +L + D + W+ ++ K Q Sbjct: 698 KNISSAKPTFNYLISNLRKDVEGVKIDNIWGDTYKWYLENEFWIEKLNRLIKGFDYTNQS 757 Query: 824 ---------LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI-PDTEPFILE 873 + P + + +++F P F Q L+ R + PD F+ Sbjct: 758 KYIETKKIRNLYGKPLKISVSRVEKFSQCPFAYFVQYGLKAKDRKIFNLSYPDLGIFMHS 817 Query: 874 GLSRYQ-------INQQLLNALVEQDDAERLFRRFRAAGDL-------PYGAFGEIFWET 919 L ++ + ++ +++ ++L L Y + + Sbjct: 818 ILEKFSHELEKKGLEWDTMDLNWAEEEIDKLINEELDNKSLDILNSSKRYEYVTKSVKKI 877 Query: 920 QCQEMQQLADRVIACRQPGQSMEIDLACNG 949 + + + + + E+ +G Sbjct: 878 LKRSIWLIGEHIKRGNFKPSYYELSFDIDG 907 >UniRef50_A0AL19 ATP-dependent helicase/deoxyribonuclease subunit B n=20 Tax=Listeria RepID=ADDB_LISW6 Length = 1157 Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats. Identities = 87/704 (12%), Positives = 208/704 (29%), Gaps = 100/704 (14%) Query: 338 IQSDILELENRAVAGVNIEEFSR---SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 ++SD L LEN+ ++ + ++ + + H ++ + E+E + + Sbjct: 264 VESDKLFLENKRAKSDSLAFLADVWGNNKFVTFEEKPQDLAIHQANNRRAEIEGIAREIR 323 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 + +D+ ++ +I Y + V S +P I +RA HP +E Sbjct: 324 QL--TLKGYRYQDMAILTRNISDYDVLCETVMESFD----IPIFIDKKRAMAKHPFIEFI 377 Query: 455 ISLLSLPDSRFVSEDVLALLDVPV---LAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 S + + E + + ++ I L +V E+GI+ + Sbjct: 378 RSSIDAILFNWKYEPIFQAVKTEFFFDVSENTSIMRRKADILENYVLENGIQNKWKWE-- 435 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL------- 564 + W + R L + E ++ +E LI E + L Sbjct: 436 --------KEGDWIYRKIRGLSTNLLPQTDEELETQAIINEMRNLIVEPLSILENNLAKA 487 Query: 565 ---ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 M L + + LE W + E ++ Sbjct: 488 RTGTEFAMALYHFLEQVKAVEHLESWRQTAEE------NGYLELAREHEQAWSSVSELLD 541 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGM 680 E + +++ ++ + +A LD S + + + + + + KV+ +GM Sbjct: 542 EFVEVLGEESLDINSFAEIVATGLDALEFSLLPPSLDQIVLSDMENAKLLDMKVIFAIGM 601 Query: 681 NDGVYPRQLAPLGFDLMSQK---------PKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 NDG+ P + G + K ++ ++ L + + KL++SY Sbjct: 602 NDGIMPLRQKDKGILSDQDRDSLRAENSNLKPSAKNNIGEEDLLAYKIISLPSDKLFLSY 661 Query: 732 IGRSIQDNSERFPSVLVQELID---------YIGQSHYLPGDEALNCDESEAR----VKA 778 + S ++++ Y+ L +E + S+ + + Sbjct: 662 PAADE-EGKVLSESNYLRKIKGQFKKLNEEVYLTDPSLLSDEEQSSYIRSKQATLGLLTS 720 Query: 779 HLTCLHTRMPFD-------PQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET 831 L P ++ + A++ L + K + E Sbjct: 721 QLQMYKRGYPLSNVWWDAYNGYFEDTKESKVAKQVLSSLYYENKTKALHETTAKNLFGEN 780 Query: 832 V--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT--EPFI-----------LEGLS 876 + + +++F++ + F Q L++ R E F Sbjct: 781 IHASVSRMEKFFSCEFQHFAQYGLKLEERAHFKLQAVDMGEIFHGAMEWISAELKRNNQD 840 Query: 877 RYQINQQLLNAL--VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC 934 + ++ + + + + + L ++ + Sbjct: 841 WGNLTEEECRQMAKLAMTFLAPKIQHEILLSSKRMEYIQYKLLQIITRATTVLNEQAKSS 900 Query: 935 RQPGQSMEIDLACNG--------------VQITGWLPQVQPDGL 964 +E+D G + + G + ++ Sbjct: 901 AFRPIGLEVDFGLKGDIPSLKIPLKSESELLLQGRIDRIDVAEQ 944 >UniRef50_A4IKW6 ATP-dependent helicase/deoxyribonuclease subunit B n=10 Tax=Bacillaceae RepID=ADDB_GEOTN Length = 1167 Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats. Identities = 97/637 (15%), Positives = 200/637 (31%), Gaps = 72/637 (11%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLD---SSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 NR + ++RPL P + +I + + + E+E + ++ ++ D Sbjct: 283 NRRHQDKALAHLEEQFHRRPLLPYEAETDAICLYEAANRRAEIEAVAREIIRLV-RDEGA 341 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 RDI +++ ++Y ++ VF +PY + ++ HP++E + L + Sbjct: 342 RYRDIALIIRQTEAYRDLVKTVFFDFD----IPYFMDEKEPMHYHPLIELVRAALETVVT 397 Query: 464 RFVSEDVLALLDVPVLAARFD---ITEEGLRYLRQWVNESGI---RWGIDDDNVRELELP 517 R+ E V + +L + E L +V G+ +W D+ Sbjct: 398 RWRYEAVFRAVKTDLLFPVDGDLAMWREAADKLENYVLAHGVKGEKWTSDERWTYRRYQA 457 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS-LLMQLNIWRR 576 G + + R E EW+ L L L ++ Sbjct: 458 LDGLNVPQTDEER-----QFEDKLNEWREALAAPLRRLERRLRRAADGRGLCTALYLFLE 512 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 L + LE+ ++ + + + +PL+ Sbjct: 513 ELQIPKKLEQMSAQAEA------DGRLVEARQHEQAWNAVVDLLDQYVEMLGAEPLPLAE 566 Query: 637 LRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 + LD+ + A V + L R I K ++G+NDGV P ++ G Sbjct: 567 FAKIIEAGLDRLEFALVPPAIDQVIVAQLDRSRLIDVKYAFIIGVNDGVIPAKVKDEGLV 626 Query: 696 LMSQKPK---------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 ++ + G R + D + AL ++LY++Y + PS Sbjct: 627 AEVEREQLRELGVALAPGGREQLFYDPFFVYLALACPSRRLYVTYPLADG-EGKALMPSP 685 Query: 747 LVQELIDYIGQ---------SHYLPGDEALN----CDESEARVKAHLTCLHTRMPFDPQN 793 L+++L+ + P ++ ++ + + L DP Sbjct: 686 LIKQLVQLFPRVSVHLCGNDPFDAPEEKPETFVTVPRATQTYLISQLRAWKRNYGIDPLW 745 Query: 794 YQPGERQSYAREWLPAASQAGKAHSEFVQP-LPFTLPETV-------PLETLQRFWAHPV 845 + EW QA Q L + + +++F P Sbjct: 746 WDVYNVLISHPEWRARVEQAVSGLFYTNQAVLKREWSRRLYGKKIQASVSRMEQFQKCPY 805 Query: 846 RAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAG 905 F L++ R F LE Q+ + + A+R+ + Sbjct: 806 AHFASHGLRLKERNV---------FRLEAPDVGQLFHAAIKQI-----ADRVREQHLDWK 851 Query: 906 DLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME 942 L + E + + +V++ + M+ Sbjct: 852 QLSRSECERLSAEAVERIAPLIQQQVLSSSNRYEYMK 888 >UniRef50_Q2RL78 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=ADDB_MOOTA Length = 1151 Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 157/965 (16%), Positives = 273/965 (28%), Gaps = 183/965 (18%) Query: 77 LPEIPKESAFNKQSMSWKLMTLL-----PQLLEREDFTLLRHYLTDDSDKRKLF------ 125 +P + + + + W++ P L E LR ++ D LF Sbjct: 57 VPGFSRVQVLSFRRLGWRVFQEAGGAARPHLGEMGKAMALRAVVSAHRDDLGLFAPLAGS 116 Query: 126 -----QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 QL+ A+L Y V D ++E E Q L + L + Sbjct: 117 PGFIEQLAHTIAEL-KLYRVTPADL------DRILERYRETGREQTILARKLRDLALVYR 169 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPS-------RVFICGISALPPVY---LQALQAL 230 + + A Y + L T LP RV++ G + P LQAL A+ Sbjct: 170 ELETYLAGRYLDPDDYL---TLLAGRLPEAAFIRGARVWVDGFNGFTPQEEAVLQALMAV 226 Query: 231 GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 + + + L DP + L R A + D Sbjct: 227 AEQVTVTLCL------------DPTLRHRRLGETELFHPTGETYHRLRQLALAAGVRVED 274 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV 350 G P R Sbjct: 275 DVCLAGTP------------------------------------------------PRFR 286 Query: 351 AGVNIEEFSRSDNKRPLDPLDS---SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 + + PL P I + + EVE +L L + L+ R Sbjct: 287 EAPALAHLEAHFGRWPLRPFRGDAAGIRLVAAANRRVEVEAAAREILR-LAREENLSWRQ 345 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 + V+V D++ Y I F D +P I RR HP++E + L + Sbjct: 346 MAVLVRDLEPYHDLIVNTF----RDFNIPLFIDRRRPVGHHPLVELVRAALEAVLEDWAY 401 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 + V L ++ + E + L +V GIR W++G Sbjct: 402 DPVFRYLKSDLVP----VPREEIDLLENYVLAHGIR-----------GRRWRDSRPWQYG 446 Query: 528 LTRMLL-----GYAMESAQGEWQSVLPYDESSGLIAELVGHL--ASLLMQLNIWRRGLAQ 580 +R L G A + A L + L + L Sbjct: 447 NSRDLETPSPPGSAAGETINAIRERASCHLRRFDGALRGRQLTGREITAALFDLLQELGV 506 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 L W D + I + ++ E + A ++ L Sbjct: 507 PERLAAWSRQAAA------AGDLDAAQEHEQIWEGLMDLLEELVLALGDTSLELEEYAAI 560 Query: 641 LAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 L L+ ++ A V TL R + +LG+ +GV P +L S Sbjct: 561 LDTGLESLKLRLIPPALDQVVAGTLDRSRQPELQAAFVLGVGEGVLPARLPEDA--TFSD 618 Query: 700 KPKRGDRS-----------RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 + + R+ R + +L AL +++ L++SY + PS LV Sbjct: 619 REREELRAAGLELAPTGTLRLFHEEFLAYLALTRSRRYLWLSYPLADA-EGKALSPSPLV 677 Query: 749 QELIDYIGQSHYLPGDEALN-----------CDESEARVKAHLTCLHTRMPFDPQNYQPG 797 + L + L ++ + L P + Y+ Sbjct: 678 RRLRQLLPGLREETAGTELPGGDDDLVYLTTPRQAAGHLARLLGRGRPLPPLWQEVYRWL 737 Query: 798 ERQSYAREWLPAASQAGKAHSEFVQPLP-----FTLPETVPLETLQRFWAHPVRAFFQMR 852 + + ++ L G + + P + + L+ F P R F Sbjct: 738 HQDARGQKMLGLLEGGGYRNQVDPLEPELARGLYPRPLRLSISQLETFAGCPFRYFLSYG 797 Query: 853 LQVNFRTEDSEIPD-------------TEPFILEGLSRYQINQQLLNALVEQ--DDAERL 897 L + R P E GL +++ A++ Q D Sbjct: 798 LGLQERRLYQVDPAGMGQFYHAALKLFVEELGRRGLDWGRLSDNEAAAIISQVVDSLAPA 857 Query: 898 FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLP 957 + + YG + +T + M+ L + R + + ++ + G LP Sbjct: 858 LQHEILSSSARYGYLRKKLEQTLQRVMEVLNEHAR--RGEFRPLAVETSFGC---RGKLP 912 Query: 958 QVQPD 962 +Q D Sbjct: 913 PLQLD 917 >UniRef50_B0TDI1 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=ADDB_HELMI Length = 1224 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 152/1067 (14%), Positives = 287/1067 (26%), Gaps = 249/1067 (23%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMF 73 + ++ P + LV Q + L+ G Sbjct: 19 LDEIAQELKGSPQGPPL---LFLVPEQATFQT-ERALATMPG------------------ 56 Query: 74 VRVLPEIPKESAFNKQSMSWKLMTLLPQ-----LLEREDFTLLRHYLTDDSDKRKLF--- 125 L + F+ + ++++++ + + + +LR+ L D+ +LF Sbjct: 57 ---LGGTIRAQVFSFRRLAYRVLQEVGGSARIPIGDLGKRMILRNLLEKHKDELRLFHRS 113 Query: 126 ----QLSSKAADLFDQYLVY----------RPDWLAQWETGHLVEGLGEAQAWQAPLWKA 171 + A + +Y + + + + G L + L + A L+ A Sbjct: 114 AGQPGFADALAGALSELKLYNIDATSLDRCQTEVIERQGAGLLADKLHDL----ALLYGA 169 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSR-VFICGISALPPVYLQALQAL 230 L + ++ L L V++ G + P L L AL Sbjct: 170 LKTFLEGKYTDP-------DDYLHLLAQRIPGSVMLRDAEVWVDGFAGFTPQELSVLAAL 222 Query: 231 GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 + CR +E D Sbjct: 223 ----------MSACR------------------------RVNVALCLDPTELDEPCDLDD 248 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQ----ELDAFVDVTPDNLLHNIQSDILELE 346 R+ L L + E + P Q Sbjct: 249 PFFRT------------RETQAKLLQLAFDRGIVIEKALHLVPAPGQSAPRFQH------ 290 Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 ++E F P S+ + + EVE ++ + D R Sbjct: 291 ---PELQHLESFYFRRPAPPWLGGTQSLFVCAAANRRSEVEGAAREIIRLC-RDQGYRWR 346 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 D+ V++ D++SY I++VF +P I +R HP++E S L + Sbjct: 347 DVAVLLRDLESYYDSIESVFSDFG----IPLFIDSKRPAPHHPLVELIRSALEAVLRDWA 402 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 E V L ++ ++ L +V GIR G + Sbjct: 403 YEPVFRYLKTDLVP----LSRGETDRLENYVLAHGIR-GRRWRDREPWLF---------- 447 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL-------------VGHLASLLMQLNI 573 R+ LG S + Q + E +G + + L Sbjct: 448 -RRRLTLGEDALSEFSD-QELAELAEINGARDRARAALASFHKAVVGAKAVRPITAALYQ 505 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 L + W+ A E A + + + + + + Sbjct: 506 LLVDLKAPEQISCWIA------EAEAAGRIEEAHAHRQVWAAVIDLFDQIVESLGETPLD 559 Query: 634 LSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L+ + LD ++S V + +L R + +LG+++GV P + Sbjct: 560 LATYAVVMEAGLDSLKLSLIPPELDQVFVGSLDRSRCPGIRAAFVLGVSEGVLPARPKDD 619 Query: 693 GFDLMSQKPK----------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 G ++ + G R R D+ Y AL A ++ Y+SY + + Sbjct: 620 GIFDDKERERIYALTGLELAPGSRRRLFDEEYHIYVALTRASERCYLSYPLADA-EGRAQ 678 Query: 743 FPSVLVQELIDYIGQ----------------------------------SHYLPGDEALN 768 PS ++ + + Q Sbjct: 679 LPSSVIARVRELFPQVTERTWLLEPGSLPTGAGLSGSAFAGAATAETAAMAQTALAARTT 738 Query: 769 CDESEARVKAHLTCLHTRMP-FDPQNYQPGERQSYARE-----------WLPAASQAGKA 816 + + + V+ L + P P R++ AR WL + Sbjct: 739 KEAAMSAVERELAEEYIVHPARSLSYLIPSLREALARRPVPLVWWAVYSWLAERPAWREL 798 Query: 817 ---------HSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTE 860 H Q LP + + + ++RF A P F L++ R Sbjct: 799 LARVLSGLWHKNREQDLPKPVSRRLFGDPLRASVSRIERFLACPFSHFISHGLRLKERRI 858 Query: 861 DS-EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET 919 PD F L Q ++L ++ G LP + E Sbjct: 859 FRLAAPDLGEFFHAALK--QFGERLRRDRLD-------------WGALPREELFRLTGEV 903 Query: 920 QCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLR 966 QL + ++ + + L + L + G R Sbjct: 904 VSDLAPQLQNEILLSTARHRYLTGRLQQTLSRAVIVLGEHARRGQFR 950 >UniRef50_A8VW70 Beta-lactamase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VW70_9BACI Length = 1157 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 85/606 (14%), Positives = 185/606 (30%), Gaps = 67/606 (11%) Query: 318 ESSQELDAFVD---------VTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 E D F + + ++L ++ + E + N+RP D Sbjct: 239 EELDPFDLFFETANTAQRTLIAANHLQIGLKPAVHFEERTRFQKKGLRHLEAMSNQRPAD 298 Query: 369 PLDS--SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 P D + + + E+ + + ++ +D V+ + D Y I+ +F Sbjct: 299 PSDDHSGVNIVAAVNKRAEIRFIAREIRRLV-RQENYRYKDFAVLSRNPDDYRDLIEHIF 357 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA-RFDI 485 + +P + +R+ HP++E SLL + + +DV+ L + + Sbjct: 358 E----EEQIPVFVDAKRSAIHHPLIEFVRSLLDIVSKNWRYDDVIRCLKTELTFPIDQSV 413 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 T E L G+ G + + + G + + + Sbjct: 414 TREHLDTFENITLALGLN-GYQWYDYEQWNKRLQFYRAAKEGEEDHTITLMHDLHKIMVD 472 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 ++ + + + S++ L L+ L + A + Sbjct: 473 PLIQFHDKITSQ----NTVNSIIEALFNLLVALSVPEKLASFRD------QALDKGRLQE 522 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTL 664 I ++ +I + A D + + L L+ S A V ++ Sbjct: 523 ARDHDQIWKELISIFDQASEACGQDKMNPITFNNMLDTGLESISYSIIPPALDQVVAASM 582 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK-----------RGDRSRRDDDR 713 R L+G NDGV P F MS + + + +++ Sbjct: 583 ATSRLSDISCTFLIGANDGVIPMPAEESAF--MSDRERVTLLESGHELAPAAERQLLNEQ 640 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL------ 767 YL +A S + +L ISY S + + PS+++ + + E+ Sbjct: 641 YLVYQAQTSPKDRLIISY-LLSDDEGKAKQPSIILNHVKEMFPALKTEIAVESPADLDIS 699 Query: 768 --------NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 + + +++ + L P + R + P + + Sbjct: 700 DEDDYFISSPEGTQSFLTERLQRWKRGYPLPDIWWSVYNWYMSERTYAPTVRTSLTSLFY 759 Query: 820 FVQPLPFTLPE---------TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI-PDTEP 869 P + T + L+++++ + F L++ R PD Sbjct: 760 DNNPGSLSKTAARGLYGQKMTASVSRLEQYYSCAFKQFANYGLRLREREYFRLDAPDIGI 819 Query: 870 FILEGL 875 + L Sbjct: 820 LFHDAL 825 >UniRef50_A5ZW43 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZW43_9FIRM Length = 1109 Score = 283 bits (723), Expect = 4e-74, Method: Composition-based stats. Identities = 99/667 (14%), Positives = 208/667 (31%), Gaps = 73/667 (10%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 +A A +E+ ++ + + +P+RE+E R+ ++ + Sbjct: 280 KAPALNFLEQNLFRYHRGAYNEEQKEVQIFQAGNPEREMEETARRISRLV-REHGYRYGQ 338 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 I V+ +++ Y + VF +A +P+ + ++ + +P +E + L + F Sbjct: 339 IAVITGNLEEYGSIARHVFDAAE----IPFFVDEKHSVLMNPFVEYLRAALEMTVQGFSY 394 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 E V L D++ + L +V GIR + TW Sbjct: 395 ESVFRYLRCG----MSDLSRREVDILENYVIALGIRGFRKWNE------------TWV-- 436 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 R+ G + + E +AE + + + + +R ++E Sbjct: 437 --RIYRGMDPAVIMDLNEIREHFTEEVRELAEGFSGKKKTVGEYSRYLYDFIVKRQIQEK 494 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 L V L+ D E I ++ + + + V R L + Q Sbjct: 495 LKV--QELHFKQQGDRAREKEYAQIYGIIMDLLDKMVSILGEEVVSPEEFRQLLETGMTQ 552 Query: 648 ERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK------ 700 +++ V I + R + + +G+N+G P+ G + Sbjct: 553 AKVALIPPGIDQVLIGDMERTRLKDIRALFFVGVNEGCIPKNTESGGILTEMDRDFLGNQ 612 Query: 701 ---PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 G + + R+ L + L +SY RS P+ L++ + + Sbjct: 613 GIELAPGPKELMNMQRFYLYLNLTKPSESLCLSYS-RSNGKGEAVGPAFLIRTIQTLFPE 671 Query: 758 SHYLPGDEALN-------CDESEARVKAHLTCLHTR---MPFDPQNYQPGERQSYA--RE 805 H ++ + S + +LT R F Y + Sbjct: 672 IHIERAEKPEKELDLLETPNTSVGYLLENLTDEEKRKENQLFAELYSWYLNSPDYCTMTK 731 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPETVPLE---TLQRFWAHPVRAFFQMRLQVNFRTEDS 862 L A+ K + + + L + L+RF A F + L++ R E Sbjct: 732 KLTEAAFLRKPVDQISKSVAKALYGEISPNGATRLERFSACAFAHFLKYGLELTERAEYE 791 Query: 863 E---------IPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRA-------AGD 906 E F +E L + Q+N + L+ A+ + A Sbjct: 792 FRAMDMGNIIHQALEEFAVE-LRQKQLNWRELSDEERDTIADNCLDKIAADYGNTILQSS 850 Query: 907 LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLR 966 E + + L +++ R + E+ + + L +Q + + Sbjct: 851 ARNYYMIERTRRILRRTVWALQEQLKNGRFEPEGFEVAIGGGRI---DRLDVMQEEDRVY 907 Query: 967 WRPSLLS 973 + Sbjct: 908 VKIIDYK 914 >UniRef50_C0FS44 Putative uncharacterized protein n=2 Tax=Roseburia RepID=C0FS44_9FIRM Length = 1143 Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats. Identities = 92/671 (13%), Positives = 194/671 (28%), Gaps = 88/671 (13%) Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 A + +E+ + + +P+ E+ + + + +DI Sbjct: 285 APSLYFMEQNLFRPYYHKWRQKEDELRIVSLKNPREELHFVAREITK-FVREKQYCYKDI 343 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V+ D+ Y ++ +F + +PY + R HP +E ++L + + F E Sbjct: 344 AVVTGDVSLYDNYVDEIFAAYD----IPYFLDQTRTILFHPFIEFIRAVLEVVELDFSYE 399 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 V L + DITE+ + L +V GIR + T + Sbjct: 400 SVFRFLRCGLT----DITEQQIDLLENYVLAKGIRGRKKWEKQWTFVFDDTEKEN----- 450 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 L E + + P E+ + L L E+ L++ Sbjct: 451 ----LTEMNEVREKIYGFFAPLSEAFTQG----KTVRDETTVLYELIEKLEIEQKLKQ-- 500 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 L + I + + + + + +P+ D L + Sbjct: 501 ----KELEFERQGNQVKAKEYAQIYKIVMDLFDKVVDFLGDEVLPVKEYADILDAGFEAA 556 Query: 649 RISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK----- 702 R+ V I + R K++ +G+NDGV P+ G ++ K Sbjct: 557 RVGVIPPGNDKVTIGDIERTRLNHIKILFFIGVNDGVVPKAGNAGGIISQFEREKMVACH 616 Query: 703 ----RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 G R + R+ + LY+++ + D S V L+ + Sbjct: 617 LELAPGAREKVFIQRFYLYLNVTKPSDFLYVTFSKVNA-DGKALRRSYFVGTLLKMFPEK 675 Query: 759 HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ-----------NYQPGERQSYAREWL 807 +E + D + L D + EW Sbjct: 676 TVEEIEETTSADCIMTPKSSMAFFLEGLQDDDRASDFSQVEKRKLWNALSKFYLTDSEWK 735 Query: 808 PAASQAGKAHSEF--VQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFR 858 P + K E +P+ + + + + L+RF A + L++ R Sbjct: 736 PETEKLLKTAYEVHSDEPISHAVTQALYGTVLENSVTRLERFAACAYAHYLNYGLRLKER 795 Query: 859 TEDS-EIPDTEPFILEGLSRYQ------------INQQLLNALVEQDDAERLF--RRFRA 903 D + L + I + + +E+ + + + A Sbjct: 796 QLLEFASVDMGNIYHDALEHFSRRVEKSEYTWFNIPEDVQETFIEESMNDAIAGCKNAGA 855 Query: 904 AGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNG 949 ++ +T + + L ++ + E+ Sbjct: 856 FENVRNRYLTGRMRQTIKRTVWALTTQIQKGKFVPSDFEVSFSRADKLDAIRFQLSDEEK 915 Query: 950 VQITGWLPQVQ 960 + + G + +V Sbjct: 916 MNLLGRIDRVD 926 >UniRef50_UPI0001692BDC ATP-dependent nuclease, subunit B n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692BDC Length = 1200 Score = 281 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 105/712 (14%), Positives = 215/712 (30%), Gaps = 129/712 (18%) Query: 318 ESSQELDAFVDVTPD-NLLHNI--QSDI-----LELEN----RAVAGVNIEEFSRSDNKR 365 E ELD F + L + Q++I + L+ R + + +KR Sbjct: 243 ERPDELDLFYPTGKTMSSLQELLDQANIGPAELIHLQPKKAPRYEHTTMLAYLEQHYDKR 302 Query: 366 P---------LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + +S + + + EVE +L ++ + RD+ V+V +++ Sbjct: 303 IGIGVCTYSSDEDKESPLQIRAAVNRRAEVEGTAREILHLV-REQGARWRDVAVLVRNME 361 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y I F +P+ +R+ HP+ E S L + + E V + Sbjct: 362 EYRELIATTFSDYG----IPHFFDQKRSVFHHPLSEYLRSALEVISRNWRYEAVFRCVKT 417 Query: 477 P-----------------VLAARFDITEEG--LRYLRQWVNESGIRWGIDDDNVRELELP 517 +L R I E+ L L + GI+ G D + + Sbjct: 418 DFLLPWPLPVEPDSEGEKLLKEREAIREQRRLLDRLENYALAFGIQ-GRDWTETKPWDK- 475 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS-LLMQLNIWRR 576 L ++E E + E + + + L ++ Sbjct: 476 --------------LFKVSLEDEDSEV-----VKQRESRELEQLNRTRNQIAEPLLALQK 516 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPD--------------AETEAAMTLIEQQWQAIIAE 622 +A+ + +++ +L +P+ E + ++ + Sbjct: 517 RMARAKTVKQRCEALYRLLLDTHVPERLESWSMNCVLEGKPEKAREHAQLWDSVIQMLDQ 576 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMN 681 + + + L L + L+ ++ + V + ++ RS K +LG+N Sbjct: 577 MVEMMGEEVLSLDLFAKLVDTGLESIQMGLVPPSLDQVLVGSMDRTRSTRIKYAVVLGVN 636 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGD---------RSRRDDDRYLFLEALISAQQKLYISYI 732 +GV P + G ++ D R + D++++ AL +KL +SY Sbjct: 637 EGVIPAAVPEDGVLTEPERELLLDSGVPMADGGRRKLLDEQFIIYSALSVPSEKLILSYA 696 Query: 733 GRSIQDNSERFPSVLVQELIDYIGQ----------SHYLPGDEALNCDESEARVKAHLTC 782 + PS LV++L + + E L RV ++L Sbjct: 697 LADE-EGKSLLPSELVKQLRNLFPDVKEELVLTEPGVLMDSAEHLPFLAHPERVLSYLAV 755 Query: 783 LH----TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP---------LPFTLP 829 ++ + EW S + + L + Sbjct: 756 QLKQWMRGTAIASIWWEVYNWFARQPEWRRRLSVMDDSLLFTNKEQKLPESTSRLLYGQK 815 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV 889 + ++R+ A P F L++ R LE Q+ L+ Sbjct: 816 LRASVSRMERYAACPFSHFASYGLRLQERKIYR---------LEAPDIGQLFHAALSQFA 866 Query: 890 EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSM 941 Q E++ L G Q +L ++ + + Sbjct: 867 NQLRTEQV-----EWAGLTPEECGRRSSLVMDQLAPRLQGEILLSSKRYHYI 913 >UniRef50_Q67MD4 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Symbiobacterium thermophilum RepID=ADDB_SYMTH Length = 1165 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 155/997 (15%), Positives = 287/997 (28%), Gaps = 176/997 (17%) Query: 77 LPEIPKESAFNKQSMSWKLMT-----LLPQLLEREDFTLLRHYLTDDSDKRKLF-QLS-- 128 L I + + Q ++W++ LP L + +LR L D +LF Q++ Sbjct: 55 LKGIIRAQVLSFQRLAWRVSLKAGGLALPPLSDLGKQMVLRALLEKKRDDLRLFHQVADK 114 Query: 129 ----SKAADLFDQYLVYR--PDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQP 182 + A + YR P+ L + + EGLGE + A L L +L Sbjct: 115 PGFIERVAGSIRELRSYRQGPESLRRQLSQLEAEGLGET-SLGAKL-HDLALVMDELRSY 172 Query: 183 RWHRANLYQRFIETLESATTCPPGL-PSRVFICGISALPPVYLQALQALGKH-IEIHL-L 239 R ++ L + L + V++ G + P L L A+ + ++H+ L Sbjct: 173 IEGRFTDPDEYLTVLAARLEESRLLEGAEVWVDGFNGFTPQELAVLGAVMRSARQVHISL 232 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 P + Y + D+ +P+ Sbjct: 233 CIPPGQLY-------------------------------------KAGGHHSPSDLFHPV 255 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR-----AVAGVN 354 L+ L L + E VD L L A + Sbjct: 256 LS--------TYDQLMQLAA--ESGVAVDPP------------LYLNEPLRFRGAPELAH 293 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 +E + + I + + EV +L ++ + L R+I V+ D Sbjct: 294 VERYLFRQSAPAWPGAPERIALVEAQNRREEVAAAAREILRLV-REEGLRFREIAVVARD 352 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 ++ Y +F + +P I RR HP++E + L + + V L Sbjct: 353 LEGYGDLAATLFA----EHGIPAFIDRRRTVAHHPLVELLRAALEVVVQDWAYGPVFRYL 408 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG------L 528 + ++ + L +V E GIR G + ++T Sbjct: 409 KTDLT----GVSRAEIDLLENYVIEHGIR-GRAWQQQEPWQY--LRRYTLEEDAVPAGPA 461 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 + LL + +L + + + L L R LE W Sbjct: 462 QQALLDEIHRIRRRATAPLLAFQRRLQRRGRPGPTVREITTYLFQLLDDLKVARQLEAWK 521 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 A D ET + + + + + + + L+ LD Sbjct: 522 A------EAEQRGDLETAREHEQVWTRVLELFDQIVEGLGDQVLSPKVYLQVLSAGLDGL 575 Query: 649 RISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK----- 702 ++ V + T+ R + +LG + +P Q A ++ + Sbjct: 576 KLGLIPPGLDQVIVGTVERSRHAGVRATLILGATEKDFPPQPAEDAIFTDRERERLKQSG 635 Query: 703 ----RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 R +++L AL L+ISY PS +V + + Sbjct: 636 LDVGPTSLERLFQEQFLTYVALTRGSDFLWISYPLADE-SGRAAAPSPVVGRMRRLFPEL 694 Query: 759 ------------------------HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 AL S V+ H L+ + DP + Sbjct: 695 KPRPAAPPAPDAEAAVAQVATPRQLAAAVARALRRARSGYAVEPHWLDLYQCIVLDPDLH 754 Query: 795 QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQ 854 + G A + + G + L + + L+ F + P R F L+ Sbjct: 755 REGAAVLAAVGYEEWLRRRGTPVGRELARLLYGDRLVTSVSRLEAFLSCPFRHFAGYALR 814 Query: 855 VNFRTEDSEIP--------DTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRF--RAA 904 + R E + + L R + L + + R R Sbjct: 815 LQGRAEFTVSAPEFGLFYHAALSLFVRELERDGLAWDTLTPDEAWRRMDSIIDRLAPRLQ 874 Query: 905 GDLPYGAFGEIFW-----ETQCQEMQQLADRVI--------------ACRQPGQSMEIDL 945 ++ + + T + L++ V+ +E+DL Sbjct: 875 SEILLSSPQHRYLLRVIRRTLQSSLDYLSEHVLHGEFRPVAVEVPFGEEMDGLPPVEVDL 934 Query: 946 ACNG-VQITGWLPQVQ----PDGLLRWRPSLLSVAQG 977 G V + G + +V DG R + Sbjct: 935 PGGGRVLLRGRIDRVDALEGRDGRWYVRVIDYKSGRR 971 >UniRef50_C0Z546 ATP-dependent nuclease subunit B n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z546_BREBN Length = 1165 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 109/667 (16%), Positives = 212/667 (31%), Gaps = 91/667 (13%) Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL-LSDLE 318 R + + + + + S E + +P L R Y L L E Sbjct: 208 QELRLIEQLMQHAKQVTIALTLDPNERDASVDELGLFHPTL-------RTYQALTLMARE 260 Query: 319 SSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD-SSITFH 377 S V + LL Q + + V F D P P +T Sbjct: 261 SG------VSIAKPLLLTEAQR---FKSSPWLRQVEQVYFQWGDPPIPDQPGRADEVTML 311 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 + + EVE + +LL L + +D+ +++ +I +Y+ I AVF + +P+ Sbjct: 312 SAVNRRAEVEAVALKLLT-LSREEGYRWKDMAILLREIGTYADEISAVF----TEYGIPH 366 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE-----GLRY 492 + +R+ HP++E S L + +R+ + V L +L DIT+E + Sbjct: 367 FLDQKRSVMHHPLVELVRSALEVIVTRWRYDAVFRCLKTDLLL--LDITDEHTARKEIDR 424 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L +V G+ +G + + YA L E Sbjct: 425 LENYVLAHGV-FGYQWAEESPWHFRGQAGAEEDAQIDELRRKYAAP---------LLSFE 474 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 A + + + + L L LE W + D + + Sbjct: 475 KEMKQATGLN-VQEMTLALYNLLIALDVPNKLEHWQRKAEN------DGDLDAAQVHGQV 527 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIP 671 ++ + + +++ L+ L L+ + A V I + R Sbjct: 528 WTGLIELMDQVVEVMGDESMNLATFARVLDSGLETIELGLVPPALDQVLIGAMERSRQPD 587 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG---------DRSRRDDDRYLFLEALIS 722 K + LLG+N+G+ P + G +++ + + + + YL +A+ Sbjct: 588 VKALFLLGVNEGIIPLRPKEEGILDEAERERLAEMGMSLAPSAKQKLMAEPYLLYQAMTR 647 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 ++L +S + PS + + + + + + + + Sbjct: 648 PSERLILSCALADE-EGKALLPSSVFTRIREVLPDIPH----QVFYNEPTGQYETDAFLL 702 Query: 783 LHTRMPFD------PQNYQPGERQSYARE---WLPAASQAGKAHSEFVQPLPF-TLPETV 832 H R F + GE + E W AS K + L + P+ + Sbjct: 703 GHPRRVFRHLLTLLRSMKKTGELPDFWWEVYDWYIRASPDVKREQWLLSGLRYFNRPQEL 762 Query: 833 ---------------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR 877 + L+RF + P F L++ RT E F + L Sbjct: 763 DLETSTTLYGKQLKMSVSRLERFQSCPFSHFSSHGLRLAERTMYKL----ERFDVGELFH 818 Query: 878 YQINQQL 884 + + + Sbjct: 819 ASLKRAV 825 >UniRef50_C0EV12 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EV12_9FIRM Length = 1134 Score = 279 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 156/965 (16%), Positives = 298/965 (30%), Gaps = 185/965 (19%) Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTL------------LR 112 P F +M +++ + P+ FN +S L ++ + + LR Sbjct: 39 PEQFSLEMQRKMVKKHPRHGFFNIDVLS--FHRLAYRIFDECGYQPGEILEDLGVSMMLR 96 Query: 113 HYLTDDSDKRKLFQLSSKAADLFDQ----------YLVYRPDWLAQWET-GHLVEGLGEA 161 L++ + F+ S K A D+ Y V WE + E LGE Sbjct: 97 KILSEGENNFLYFKKSMKKAGFIDELKSMLMEFIGYGV-------TWEQVEEVSEKLGEN 149 Query: 162 QAWQAPLWKALVEYTHQLGQPRWH-------RANLYQRFIETLESATTCPPGLPSRVFIC 214 KAL +LG+ H R + ++ ++ P L + VF Sbjct: 150 --------KALSNKCKELGRIYEHFDKAIEGRFMVTEQILDVAREFAKEAPMLTNAVFYF 201 Query: 215 -GISALPPVYLQALQAL---GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFE 270 G + PV L L+ L I + + Sbjct: 202 DGFAGFTPVQLAFLKELLKVAGQINVTI-------------------------------- 229 Query: 271 DRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVT 330 +P F + + G+ LL +L E+ QE++ V + Sbjct: 230 --TIPEFVPGQRGMPEDLFTSSKKTGDALL------------MLCQ-ENMQEVEEVVKLD 274 Query: 331 PDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLH 390 + + A N+ + SR + ++ I VCH+P E + + Sbjct: 275 TP-----VSPRFINNPELAFLEKNLFQNSRKIYSKKIER----IHMTVCHNPDGEADYVM 325 Query: 391 DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 ++ L RD V+ D+ Y+ + F A +P ++ H Sbjct: 326 HKI-EQLVRQKGYRYRDFAVLSGDVADYA----SAFKRKAAILNIPVFEDTKKKVSYHSG 380 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 +EA SL L + E V L ++ +E YL +V +G+R G Sbjct: 381 VEAVRSLFHLAQMEYSYESVFRYLKSG----MSNLIDEDADYLENYVLYAGVR-GYSMWK 435 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 L +LL + SV+ + + + + L +++ Sbjct: 436 KPFYRRLKNKDEAAIKAL--LLLQEKFMEETENFCSVM--RDKEASVRDKIEVLYHTMVK 491 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 L+ + Q + EE + A + +++ + + + Sbjct: 492 LSFEEKLKNQAQKAEENSDFVK-------------AAEYRQLYDLLLSLMDKIVMIFGEE 538 Query: 631 AVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 + + L + + LD + L V + L R KV+ + GMNDG P + Sbjct: 539 KMAVKELAEIVDAGLDALGLGVVPLTMDQVVLGDLKRTRLHEVKVLFITGMNDGKIPPNI 598 Query: 690 APLGFDLMSQKPKRGDRS-----------RRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 G L+S + K ++ + +D + A +LY SY D Sbjct: 599 EDRG--LLSDEEKEVLKNCGISLSQSLLEQSMEDEFYMYMAFAKPTDELYFSYSVTD-SD 655 Query: 739 NSERFPSVL---VQELIDYIGQSHYLPGDE--ALNCDESEARVKAHL---------TCLH 784 S PS+L + +L + + Y + N ++S + + Sbjct: 656 GSALRPSLLQKNISQLFPKLKRKQYPEEERRYYFNLEDSREFLIESFLQAKTEPEKVRKN 715 Query: 785 TRMPFDPQNY---QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFW 841 + + G ++ + SE + + + + L+RF Sbjct: 716 RAFVMLAKYWLEQSEGRKELEKYGHWIENAYQEPELSEELLEQLYGKELSGSVTRLERFA 775 Query: 842 AHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILEGLSRYQ----------------INQQL 884 A P + F L++ R E P D + L + + +Q Sbjct: 776 ACPYQYFCIYGLELREREEYKIRPIDLGNLFHKALECFSRKVKESEYSWKNIPDEVQEQY 835 Query: 885 LNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEID 944 ++ + E L F+++ Y + + +Q L + + E+ Sbjct: 836 ISEALHTAMDENLSDVFQSSSRNQYKI--KTVERIMKRTIQVLRVHLKNSQFEPDRFELS 893 Query: 945 LACNG 949 N Sbjct: 894 FGKNK 898 >UniRef50_B8I2Y3 ATP-dependent helicase/deoxyribonuclease subunit B n=5 Tax=Clostridium RepID=ADDB_CLOCE Length = 1149 Score = 279 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 84/690 (12%), Positives = 187/690 (27%), Gaps = 94/690 (13%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 ++ ++ + + P I + E+E ++ Sbjct: 276 PNLPRFKDSRELQSLETNYCSYSYRAYQLPTQD-IELFESVNIYTEIEECARDIIKQC-R 333 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 D + +DI V ++ Y I +F +P I + +HP++ +S+L Sbjct: 334 DNGMQFKDITVATRNLTGYENLIGVIFEQY----NIPCFIDSKTEITNHPLVRMVLSMLE 389 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + + E V L + I + L +V GIR G + Sbjct: 390 IFTENWSYESVFRYLKSGLT----GIDNTKIDILENYVLACGIR-GSRWTQEADWNTSIE 444 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 + + ++ + E+ L + R Sbjct: 445 FR----------------PDDGQKPENDEMLLNINKTRNEIREPLIRFRNRTKGRRTAGD 488 Query: 580 QERPLEEWL------PVCRDMLNAFFLPDAET-EAAMTLIEQQWQAIIAEGLGAQYGDAV 632 + E+L R+ + F + + + + + Sbjct: 489 FCAGIYEYLVEIGVEQRIRNYIEKFTQSGQLRLAGEYQQVWNILMDVFDQAVEVMADETF 548 Query: 633 PLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 L + L + +IS + V + ++ +RS K + +LG NDGV+P Sbjct: 549 GLEKFANVFKIGLAEYKISSIPASLDQVLVGSIEHIRSHEIKALYILGTNDGVFPSAGMS 608 Query: 692 LGFDLMSQKPKRGDR---------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 G + + R +R D++YL L + + L +S+ + Sbjct: 609 EGVLSDADREVLDKRGIELASDTKTRAFDEQYLIYRTLTTPKNYLRLSWPIAD-HEGRTM 667 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA-----------HLTCLHTRMPFDP 791 PS ++ + + + D+ + A L + + Sbjct: 668 RPSTIISRMRKIFPKVTEKSNIVKPSADKQHIDLIASPIPAFNQLVCALRQKNEGIEQGE 727 Query: 792 QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP---------FTLPETVPLETLQRFWA 842 + S EW A P + + L+++ + Sbjct: 728 IWREIFAWFSGQDEWKQKCDAMINALKYRNIAAPVDKSKIRELYGKSPYFTVSRLEKYTS 787 Query: 843 HPVRAFFQMRLQVNFRTEDSE-IPDTEPFILEGLSR-----------YQINQQLLNALVE 890 P + Q L R PD F+ + R ++ + + Sbjct: 788 CPFAFYVQYGLGARERKIYRMSPPDVGTFMHAVIERFSKMVDENNYSWREFDRQWCSEQV 847 Query: 891 QDDAERLFRRFRAA---GDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG--------- 938 + L + G + A + + + + + Sbjct: 848 SKIVDELLDSMKNTILGGSKRFKALAVRLKRVVTRAVWLITEHIRRSSFEPVGYEVDFGD 907 Query: 939 ----QSMEIDLACNG-VQITGWLPQVQPDG 963 M I+L +++ G + ++ Sbjct: 908 GGAYPPMVIELDSGEKIRLVGRIDRIDALR 937 >UniRef50_B6FV68 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FV68_9CLOT Length = 1134 Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats. Identities = 80/567 (14%), Positives = 177/567 (31%), Gaps = 64/567 (11%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 I R ++ D I + +P+ EV+ ++ L Sbjct: 279 IYRFRENTALAFLEAHLFRYSKEQYEKEQDC-IQVYCAKNPKEEVDFAAQKI-RNLARTR 336 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 R+I ++ +D+++Y I+ +FG +P + +R+ + +E SLL++ Sbjct: 337 GYRYREIAIIASDLNTYGNQIEKIFGEY----QIPIFMDHKRSILLNSFVEYVRSLLAMV 392 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN----VRELELP 517 + F E V L + ++E + + +V GIR G R + Sbjct: 393 EQNFSYESVFRYLRTGLT----GFSDEEIDIVENYVIALGIR-GYKKWQEKWIRRARGME 447 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 T R L + ++ + ++ + ++ + L + Sbjct: 448 ETELERINDIKERFL---------------IQVEDVTMVLTKRNKTVSEVTKALYDFLVK 492 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 ++ ++E+ + + E + + + + + + + L Sbjct: 493 EELQKKVKEYEIRFGN------DGELALEKEYGQVYRIVIELFDKFVELLGEEQIALKEY 546 Query: 638 RDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + L L++ ++ + V + R K V LLG ND P + G Sbjct: 547 CELLDAGLEEAKVGVIPPSLDQVVAGDIERTRIKDIKAVFLLGANDMYIPGKENAGGILS 606 Query: 697 MSQKPK---------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 + G + + ++ + ++LY++Y S D P+ L Sbjct: 607 EHDRELFQKGGVVLAPGAKEKAFIQKFYLYLLMTKPSEQLYVTYSKVSA-DGKTLRPAYL 665 Query: 748 VQELIDY-----IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 +Q+L I + P + L A + L H + + Sbjct: 666 IQDLRRMYKKMEIQDADCQPDKKELTPKSGFAYLIEKLQKKH--EGLGTEWQELYTWYRQ 723 Query: 803 AREWLPAASQAGKA--HSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRL 853 +W Q +A + + L + + + L++F A F L Sbjct: 724 NPKWRKKIEQIVEACFYEKPKDGLTTRTAQRLYGTILENSVTRLEKFSACAYAHFLSYGL 783 Query: 854 QVNFRTEDSEIP-DTEPFILEGLSRYQ 879 + R E + D + + Sbjct: 784 NLREREEYTFQAIDLGNIFHSAIEHFA 810 >UniRef50_C5RQN7 ATP-dependent nuclease subunit B n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQN7_CLOCL Length = 1151 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 71/539 (13%), Positives = 171/539 (31%), Gaps = 55/539 (10%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I ++ + E+E + +L + D RDI V+ ++DSY I+A+F Sbjct: 313 INININVNSFNEIEEVAKGILEAV-RDRDFRYRDIAVVTRNLDSYDEMIKAIFNEY---- 367 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY I ++ +S+ ++ S L + + E V L + ++ E + L Sbjct: 368 NIPYFIDKKKEIESNKLIVFLKSALEIISKNWSEEAVFKYLKSDLT----SLSREQVDLL 423 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + +GIR G + + + +L E +L + Sbjct: 424 ENYALANGIR-GKRKWTKETWDYDFPKELSGGKEKE-EILEEINELKAQVVNPLLKLYDI 481 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 S A + + + + + + +E W+ R + I Sbjct: 482 SISKA----KVKEISKIIFQFLQQVGAFEKIENWIQGFRTEGKQLL------ANEYSQIW 531 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPF 672 + + + L L+ ++ ++ V + ++ ++ Sbjct: 532 NLIIETLDMLVEVLGDAEMSLEEYEKILSIGFEENKMGLIPATIDQVLVGSVERSKTNGV 591 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR---------GDRSRRDDDRYLFLEALISA 723 K++ ++G+NDGV+PR ++ G + R+ ++++L E +A Sbjct: 592 KILYIIGVNDGVFPRSVSDEGILNDEDRTVLMENGITLASTTRAAAFEEQFLVYETFTAA 651 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG-------DEALNCDESEARV 776 ++ ISY + PS+LV L + + ++ + ++ Sbjct: 652 SDEIIISYPIADF-EGKALRPSILVSRLKNIFKKITIKSDILDVVSMEKVTLPMPTFNQM 710 Query: 777 KAHLTCLHTRMPFDPQNYQPGERQSYAREW-------LPAASQAGKAHSEFVQPLPFTLP 829 + + + + E+ + + + + + + Sbjct: 711 ISAIRAKMEGAEISEYWSEVYKWYHDQEEYKLLKDRIMRGFYYSNQGVIKNKEKIKKLYG 770 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 E + + + P F L+ R + L L + ++ Sbjct: 771 EDYSVSRFETYVNCPFSYFVNYGLKAKERKLYN---------LTTLDKGTFLHNVIENF 820 >UniRef50_A6TVN9 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Alkaliphilus RepID=ADDB_ALKMQ Length = 1149 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 91/588 (15%), Positives = 195/588 (33%), Gaps = 55/588 (9%) Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSI---TFHVCHSPQREVEVLHDRLLAML 397 DI E I R N P I + E+E + +++ ++ Sbjct: 270 DI-EERKVLPKEKEIAHIEREFNTYPYKQYADEIANLEIFAGSNLYSEMENVAAQIIHLV 328 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 + DI ++ +D YS ++ VF ++PY I ++R+ ++P++E +S Sbjct: 329 -RNRGYRWNDIALVSGGLDQYSMILKRVFEEY----HIPYFIDEKRSIMNNPMIELILSS 383 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW-GIDDDNVRELEL 516 + + + EDV + L D+T++ + L +V + GIR + + E Sbjct: 384 IEILSRGYQYEDVFSFLKTGF----SDLTKDEVEQLENYVLQYGIRGKAYSEPFTKGFEK 439 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 Q G ++ + + + + P+ + + + L + + Sbjct: 440 KQIQQKDKEEGEKQIDEEKKEKYNELRMRFIAPFAKFE-KRIYRKKKIGEITKALFEFMK 498 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 L E L +W+ R+ +F E T I + I + ++ L Sbjct: 499 ELNIEDKLNQWIEELRE--EKYF----EYVNENTQIWNKIMEIFDQLTEILADESATLKE 552 Query: 637 LRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 L ++ V + ++ +S K + ++G+NDGV P G Sbjct: 553 YGRILEAGFLACKVGVIPSTIDQVLVGSIERSKSHDIKALFVVGVNDGVLPFGQEDGGIL 612 Query: 696 LMSQKPKRGDR---------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 L ++ + S +++++ A + L++SY Q+ S+ Sbjct: 613 LDHERESLVKKGISIGTTLESSLLEEQFMIYSAFSKPTEYLWVSYALAD-QEGKAMRQSI 671 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ----------NYQP 796 L+ + + D + D + ++ Q + Sbjct: 672 LIDRFKKLFK-NLRIKSDVVNDVDRQLHLITTPISTFKYMTENIRQNVDDKAMADMWWDV 730 Query: 797 GERQSYAREW--LPAASQAGKAHSEFVQPLPFTLPETV-------PLETLQRFWAHPVRA 847 + S W G H + + +++ + L+RF P Sbjct: 731 YDWYSKEPTWEDRRKLMVKGLFHQNQITYIGENKAKSLYDNPIKSSVSRLERFANCPFSH 790 Query: 848 FFQMRLQVNFRTEDSEI-PDTEPFILEGLSRYQINQQLLNALVEQDDA 894 F L+ R E PD + + Q ++++N ++ D Sbjct: 791 FVTYGLRPKERKEYQLSNPDIGRLFHDSME--QFTKEMVNEEIQWKDL 836 >UniRef50_D2LU04 ATP-dependent nuclease subunit B n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LU04_BACS4 Length = 1171 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 106/738 (14%), Positives = 227/738 (30%), Gaps = 128/738 (17%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSD------------ILE--LENRAVAGVNIEEFSRSDN 363 E ELD F + IQ+ IL+ L ++ A ++E+ Sbjct: 246 EVLNELDLFFETAK--SYQTIQNVCREHNLEVNRPFILQMSLRFKSKAIAHLEKNYEIRP 303 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 + D I + EVE + +L ++ D + ++I++++ +I Y+ +Q Sbjct: 304 SPVYETNDG-IRVISAVHRRSEVEGIAREILHLV-RDKSYRFQEIVLILRNITDYTDLLQ 361 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 VF +P + +R+ +HPV+E S L + + E V L +L F Sbjct: 362 TVFEDYG----IPLFMDQKRSMLNHPVIEFIRSSLEVIYGNWRYEAVFRCLKTDML---F 414 Query: 484 DIT------EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + E + L +V GI+ + + W + Sbjct: 415 PLESHVSEMRERVDQLENYVLSYGIK-----------GVRWYDKKPWSYRR-------VK 456 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML-- 595 SA GE + DE I +L L L ++ + + + E L Sbjct: 457 TSADGERKRTTAEDEFEQEINQLRN---ELTKPLIWLQKQMKASKTVTEKCETIYHYLVM 513 Query: 596 ------------NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 ++ + + + ++ + + + V L + + Sbjct: 514 CQIPEKIERMRNDSVASEELQRAKEHDQVWSAIVELLDQMVEMAGDEDVSSELYKKMIDT 573 Query: 644 RLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF------DL 696 ++ + + A V + + R + +LG+NDG+ P + D Sbjct: 574 GVESMKFAIIPPAIDQVIVADMEHSRLSNIRCAFILGVNDGIIPAKPDEGSIVTEEERDT 633 Query: 697 MSQKPKRGDRS---RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 ++Q S + ++ +L A +A + LY +Y + PS++++ + D Sbjct: 634 LAQAGINLAPSSTRQLLNETFLMYLAQSTASELLYFTYPLADE-EGKSLQPSIVLKRIKD 692 Query: 754 YIGQS-----HYLPGDEALN--------CDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 + + P D D++ + + L + Sbjct: 693 FFPSLEEELWFHEPTDMTDEEQFFFINGSDKTLSYLTFVLQSWKKGYSIPSFWWDVYNWY 752 Query: 801 SYAREWLPAASQAGKAH--SEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQM 851 W Q + Q L + + + ++++ + F Sbjct: 753 VANENWNFKVKQVLHSLFYKNKAQQLSKHTSKELYGDHLVTSVSRMEQYQSCAFAQFANY 812 Query: 852 RLQVNFRTEDS-EIPDTEPFILEGL------------SRYQINQQLLNALVEQDDAERL- 897 L++ R E PD L Q++++ + L ++ E Sbjct: 813 GLRLKERETYKLEAPDVGTLFHAALKEMADYLRRNGKDFSQLSKEECSTLAKKIVEELAP 872 Query: 898 -FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR-------------VIACRQPGQSMEI 943 +R Y + E + LA++ Q ++ Sbjct: 873 KIQREILLSSNKYHYIKQKLEEVVARASHVLAEQSRSSGFSPIGLEVAFGENQDLPPLQF 932 Query: 944 DLACNGV-QITGWLPQVQ 960 L ++ G + +V Sbjct: 933 QLQNGTTMELVGRIDRVD 950 >UniRef50_UPI00017899D8 ATP-dependent nuclease subunit B n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017899D8 Length = 1176 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 145/1008 (14%), Positives = 296/1008 (29%), Gaps = 163/1008 (16%) Query: 13 LEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGI--AANIDFPLPASFIW 70 + M +E DP +++V G + + L GI + Sbjct: 18 IRQEMIERLEHNPKGDPM---ILIVPEQG-SYEAEHALVNAGGIRGMMRAQVLSFRRLAY 73 Query: 71 DMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSK 130 + + A +++ L +L + E L + K Sbjct: 74 RVMQETGG--AAKVAISEEGKRMLLYKILRRRKEE---------LHMFGASGEQHGFVGK 122 Query: 131 AADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLY 190 ++L+ + Y + + + L + L + + Y Sbjct: 123 LSELYTEMKRY---CIDASCVEEQLGQMVSGSGNSPMLRRKLEDIVTVFRDFEVEISRFY 179 Query: 191 ---QRFIETLESATTCPPGLPS-RVFICGISALPPVYLQALQAL---GKHIEIHLLFTNP 243 + + +L T + ++I G P + LQ + K + I L P Sbjct: 180 MDEEDTLASLAEGVTESEYIKRADIWIDGFHGFTPQEYRVLQEIIVHAKRVTIALTLDKP 239 Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASW 303 R E + + + + + +L Sbjct: 240 ------------------YRNGTVPHELDLFHPTAVTYIKLKGIIDEIGLEAEHRIL--- 278 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 L F + +L +++ + + R + + S N Sbjct: 279 ---------------HPDVLPRFQESP---MLAHLERG-YDRKKRWAEPDEGPDTASSPN 319 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 + + H + E+E +L L ++ R++ V V ++ Y + Sbjct: 320 R-----GRKGLLLHAASHRRAEIEGALREMLR-LAQEEGARYREMAVFVRNMGDYEHLMG 373 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 +F + +PY + +R+ HP++E S L + R+ EDV + +L Sbjct: 374 PLF----REYGVPYFLDQKRSELHHPLVEFIRSALDVIGRRWRYEDVFRCVKTDLLLPLD 429 Query: 484 D-ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 +T E + L V SGI+ D +P ++E + Sbjct: 430 GSLTREDMDRLENHVLASGIQGTRWTDGRPWKGVP----------------SLSLEEGES 473 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 E ++ + E + + L+ + + + + + +L +P+ Sbjct: 474 EIRN-----QDGMAAIEYARKV--ITEPLHAFEKRMKKAASATDQSTAVYRLLEECAVPE 526 Query: 603 --------------AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 E + ++ + + + + L L L + Sbjct: 527 KLELLSRAALDAGRPEEAREHRQVWGAVLGLLDQIVEMMGAEKLSTELFTGVLGTGLTEM 586 Query: 649 RISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR- 706 +++ + V I ++ R+ K LLG+NDGV P Q G ++ DR Sbjct: 587 KMALVPPSLDQVLIGSMDRTRTGGVKYAFLLGINDGVLPAQFQDDGILTEPERVHLEDRG 646 Query: 707 --------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL------- 751 R D+R+L AL SA ++L++SY + PS +V+ L Sbjct: 647 LELAPSISRRLLDERFLIYNALTSASKQLWVSYPAADD-EGKPLLPSEVVRHLKLMFQLE 705 Query: 752 ------IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 + GQS A+ D++ A + L + + Sbjct: 706 EEPLFPRPHAGQSALEQEGYAVRPDKTLAYLAGRLRDWRNGEEIPDLWWHVYNWYAEQPG 765 Query: 806 WLPAASQAGKAHSEFVQPLPFTLP---------ETVPLETLQRFWAHPVRAFFQMRLQVN 856 P + + S + P L + ++RF A P F L++ Sbjct: 766 LRPRLTTMLSSLSYRNEARPLKLETSRQLYGTKLRTSVSRMERFVACPFSHFASHGLKLR 825 Query: 857 FRTEDSEI-PDTEPFILEGLS----RYQINQQLLNAL-------VEQDDAERLFRRFRAA 904 R PD LS ++Q + L + +RL + Sbjct: 826 ERQLYRLQAPDIGQLFHAALSSMAVKFQSQHRSWGDLTAEECLREAEATVDRLAPMLQGE 885 Query: 905 GDLPYGAFGEIFWE---TQCQEMQQLADRVIACRQPGQSMEIDLACNG 949 L +G I + + L ++ + +E+D Sbjct: 886 ILLSSKRYGYISRKLKNIVGRASVILGEQARRGKFEPIGLELDFGPGK 933 >UniRef50_A8FBR0 ATP-dependent helicase/deoxyribonuclease subunit B n=5 Tax=Bacillus RepID=ADDB_BACP2 Length = 1169 Score = 273 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 111/699 (15%), Positives = 218/699 (31%), Gaps = 94/699 (13%) Query: 336 HNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS---ITFHVCHSPQREVEVLHDR 392 +I I E +R + ++ +RP+ P + +T S + E+E + Sbjct: 271 ADISETIFERNHRHLYTPDLAYLEHQYEQRPVQPYQENTPHLTVSKSASKRAEIEGVARD 330 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 +L ++ + L RDI V+ +D Y ++ VF +P+ I + Q HP++E Sbjct: 331 ILDLV-REKGLRLRDISVVARHVDDYKDTLKEVFRDYD----IPFFIDGNESMQYHPLIE 385 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARF---DITEEGLRYLRQWVNESGI---RW-- 504 S L + + E V + L + E L + G+ RW Sbjct: 386 LIRSSLDVIKGNWRYEAVFRCVKTEFLFPLEITKNKAREQADQLENYCIAYGVKGERWTN 445 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 G R L + T + + M + EW + Y L + Sbjct: 446 GSRFHYRRFQSLDEDFRQT-----DQEIEMEQMLNDVKEWITPPLYQLQKRLKNAQ--KV 498 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 ++ + ++ + LE + L A + ++ E + Sbjct: 499 RDMVEAVYVFLEEIQVPDKLE------KARLEAEEAGRLAEAMQHGQVWDAVIQLMDEFV 552 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDG 683 + + L + + L + + + V I ++ R K + ++G+NDG Sbjct: 553 DMLGDEELSFPLFQQMIDTGLASLKFALIPPSLDQVFIGSMDLSRMYQVKCMFIIGVNDG 612 Query: 684 VYPRQLAPLGFDLMSQKPKR---------GDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V P + + + + R D+++L +AL S LY+SY Sbjct: 613 VIPARPSDESVLSEDDREWLKRAGAELAETGKERLLDEQFLIYQALSSPSHHLYLSYAAS 672 Query: 735 SIQDNSERFPSVLV---QELIDYIGQSHYLPGDEALNCDESEARVKA----------HLT 781 + PS L+ QEL+ Q+ Y+ E L DE V L Sbjct: 673 DA-EGRSLLPSPLIKYCQELMPNHQQALYVLDPELLEDDEQLKFVANEHVSLSYTISQLQ 731 Query: 782 CLHTRMPFDPQNYQPGERQSYAR-EWLPAASQAGKAHSEFVQPLPFTLPETV-------P 833 + P + + + + + +PL + + + Sbjct: 732 QWLNQYPISGVWWSVYNYLMTSPNRDVSKNIMSSLFFTNRAKPLKPNVTKELYGDHIQGS 791 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRT-EDSEIPDTEPFILEGLSRYQINQQLLNALVEQD 892 + +++F A F L++ R E PD L I+ L+ + Sbjct: 792 VSRMEKFNACAFSHFASHGLKLKDRQFYKLEAPDIGQLFHSALKH--ISDTLVEQKKDWK 849 Query: 893 DA-------------ERLFRRFRAAGDLP---YGAFGEIFWETQCQEMQQLADRV----- 931 + E+L R + L + E + + L++ Sbjct: 850 NLTKEDCVTYSRHAIEQLAPRLQKEILLSSNRHAYIKEKLQKILIRVSSILSEHAKVSGF 909 Query: 932 --------IACRQPGQSMEIDLACNGV-QITGWLPQVQP 961 + P L ++ G + +V Sbjct: 910 SPVGLELGFGGQGPLPPFTFQLKNGCTMELVGRIDRVDK 948 >UniRef50_D1BPP0 ATP-dependent nuclease subunit B-like protein n=3 Tax=Veillonella RepID=D1BPP0_VEIPT Length = 1185 Score = 272 bits (695), Expect = 7e-71, Method: Composition-based stats. Identities = 115/695 (16%), Positives = 230/695 (33%), Gaps = 101/695 (14%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 R V E + + + D +I ++ +RE + + +LA +E RD Sbjct: 276 RGPQIVRELESNYFISPSKKNSTDETIPLIRGYNREREADAVARGILAYVESSEEARYRD 335 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 + +M+ + ++Y ++ VF +P+ I +R ++HP+ E +L + + Sbjct: 336 VCIMLRESETYGDTLEKVFTRYG----IPHFIDRQRPMKNHPLGELLTALFDIVRHNYSR 391 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI---RWGIDDDNVRELELPATGQHTW 524 + + LL ++ +T E + L +V E GI +W + + + Sbjct: 392 DSMFLLLKTDLMP----LTREAVDELENYVLEFGIDHYKWERESWPYLRGFYEGQDEESH 447 Query: 525 RFGLTRMLLGYA---MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 R + A + W Y + G G QL L Sbjct: 448 LDAPRRARVNKARQTIMDVLSPWFDFAAYSD--GHTGAEWGA------QLYGLLETLQVP 499 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 L EW+ +A + D E++A+ + + I E + + L + L Sbjct: 500 ERLYEWVK------DAETVGDQESKASHEQMYNAVLSFIDEISMVMKDEILTLDEMMLLL 553 Query: 642 AQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 + L S + V I T+ S + V ++G+N GV+P+ + G L+ K Sbjct: 554 EEGLSDVNYSMIPPSLDHVVITTIERGYSQWWPKVFVMGLNQGVFPQSMGDEG--LIKDK 611 Query: 701 PK-----------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 + G + ++ +L A+ A L +SY G S +D + PS++V+ Sbjct: 612 ERQELANAGITLAEGALPKAFNENFLLYLAMTRASDSLTLSYAG-SGEDGTGLEPSLVVK 670 Query: 750 EL--IDYIGQSHYLPGDEALNCDESEARVKAH---LTCLHTRMPFDPQNYQPGERQSYAR 804 L + Y+ Q+ +P A + + L F P Y Sbjct: 671 RLESLGYVDQTVEIPLSIAPDTEADYVWRPLQSLSLLSERWGALFSGYEVNPLWWGLYN- 729 Query: 805 EWLPAASQAGKAHSEFVQPLPFTLPETV------------------PLETLQRFWAHPVR 846 W + +E + + V + L+R+ P + Sbjct: 730 -WARESETYRSRLAEVSRGIRDNNDVPVITQDLVNGLFLSKGYMSGSVTRLERYQQCPFK 788 Query: 847 AFFQMRLQVNFRTEDSE-IPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFR----RF 901 + Q L++ R S P+ F+ L R + LL + D + + R Sbjct: 789 FYAQYGLKLEPRPVRSFGAPEIGTFLHANLER--LGNYLLENNKQWRDLDEEEQANLCRT 846 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQ-------------------------LADRVIACRQ 936 A L GE + + ++Q ++ + Sbjct: 847 VADEILQENQLGEETSDAYQKAIEQRVQRTLHVTVDRLVEWSKRSDFDTKYLEQDFGRQG 906 Query: 937 PGQSMEIDLACNG-VQITGWLPQVQPDGLLRWRPS 970 + + L + +++ G + ++ Sbjct: 907 GWDPIRVPLGEDRYLRLIGQIDRIDEYTRGGQTYG 941 >UniRef50_B6G1B7 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1B7_9CLOT Length = 1158 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 92/644 (14%), Positives = 212/644 (32%), Gaps = 65/644 (10%) Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 ++E + S I + EVE + + + D +DI Sbjct: 287 NEELQHLERYYNSYPYSIYQKKTEKIRIREYSNLYNEVEEVAKEIANDII-DGRYRYKDI 345 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 + +IDSY ++++F +P+ I+ + +++P++ IS+L + R+ E Sbjct: 346 TIAARNIDSYESLVKSIFSEY----KIPFYINKKSEAKNNPIITMIISVLEMKKRRYGYE 401 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 + L +L D TE+ + L +V +GI ++V E LP + Sbjct: 402 TMFRYLKSGLL----DFTEDEISLLENYVIANGISGNKWFEDVWEYRLPNSFYEYEESEE 457 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 + + +DE L ++ + + L + + +E + Sbjct: 458 ELETKKRINDIKNRVIAPIKRFDE--KLSSKNRKTVEDICRYLYEFLEDINIFEKIENTI 515 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 + R+ E+ A + + ++ + + + + L + LD+ Sbjct: 516 DILRE------KGMLESAARYSQVWNTVSDLLDQLVEIMGDEKISLERFIRIVNIALDEY 569 Query: 649 RISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD-- 705 + + V + + M + K + L+G DGV+P G S + K D Sbjct: 570 ELKTIPPSIDQVTVTEVDRMNNPNTKHLYLIGTVDGVFPMPSKENGLLSDSDRGKLSDMN 629 Query: 706 -------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG-Q 757 R R ++++L +A+ + KL +SY + + S+++ + Sbjct: 630 VELDKDSRKRVFEEQFLVYKAITATSDKLTVSYPIAD-SEGKTQRASIIISRIKKLFKYV 688 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTR-------------MPFDPQNYQPGERQSYAR 804 E + +E V + + +T E Sbjct: 689 DIKSYFLEGVYEEEDLKEVNSKIPTFNTMVDKIKEAADKDFENGISDIWKDTYEYYLNDD 748 Query: 805 EWLPAASQAGKAHSEFVQPLPFTLP--------ETVPLETLQRFWAHPVRAFFQMRLQVN 856 + + + Q +T+ + L+++ + P F + ++ Sbjct: 749 RYNDITKRIVEGIDFTNQFEYVDEDKIKELYNSKTISVSRLEKYASCPFAYFIEYGMKAK 808 Query: 857 FRTEDSEI-PDTEPFIL------------EGLSRYQINQQLLNALVEQDDAERLFRR--F 901 R E PD F+ +G++ ++++ + + V + E + + F Sbjct: 809 DRKEYLFTAPDVGSFVHKVIENYSKTMHKDGITWHEVDDKYIELRVSEMVDELIAKIPGF 868 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL 945 Y ++ +AD++ R E++ Sbjct: 869 ILESSPKYKYLAHRLKVLITVSIKIIADQIKQGRFEPDDYEVEF 912 >UniRef50_C6JEU6 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEU6_9FIRM Length = 1124 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 142/1032 (13%), Positives = 274/1032 (26%), Gaps = 193/1032 (18%) Query: 35 ILVQSTGMAQWLQMTLSQKF---GIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSM 91 I+V Q Q TL + GI NID + +F + K +SM Sbjct: 36 IIVPEQFTMQT-QKTLVEMHPGKGIL-NIDILSFERLAYRVFEETGGDNRKVLEDTGKSM 93 Query: 92 SWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWET 151 +L +++++ L YL +K F QY + Sbjct: 94 ------VLQKMVQQHRKEL--AYLGSQMNKPGYLDEVKSLVSEFMQYDI----------R 135 Query: 152 GHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLY----QRFIETLESATTCPPGL 207 + + E Q L L + L Q + + ++ L L Sbjct: 136 EENLAEMKEKAQNQPLLEMKL-KDVGILYQSFREFLKGHYMTGEEVMDVLLKQLPFSEKL 194 Query: 208 PSRVFIC-GISALPPVYLQALQAL---GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTR 263 F+ G + P+ + L+ L I + + Sbjct: 195 KGAEFLFDGFTGFTPIQVNVLRELLVIADRISVTV------------------------- 229 Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQEL 323 + + G P + + + I L+ L E Sbjct: 230 ---------------------TMDEREDAFSPGKPYQLFF--MSKQMIRALAGLTRDLED 266 Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQ 383 ++ + QS + NI + + I SP Sbjct: 267 PVYLKPSG-------QSRFAQAPALQFLEKNIFRYRKGVYA----EEQQEIKIFTAPSPL 315 Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 E+ R+ ++ +I V+ +++ Y+ VF A +PY I ++ Sbjct: 316 EEMREAARRMSELVRTC-GYRYGEIAVITGNLEEYARLAAQVFEEAD----IPYFIDEKH 370 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 + +P +E + + + F E V L ++T E L +V GIR Sbjct: 371 SVMMNPFVEYLRAAMEMAVQGFPYESVFRYLRCG----MSEVTREQADKLENYVLALGIR 426 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG- 562 G W R+ G E Q + + E +A+ G Sbjct: 427 ----------------GYKKWSEKWVRVYRGMGAEKIQELNEIREIFAEEVRELAQGFGS 470 Query: 563 ---HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 + L + + W + R D E I + Sbjct: 471 GKKTVEEYCRILYEFIQKSDV------WQKLKRQERKFKESGDKAMEKEYNQIYGIVMDL 524 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLL 678 + + + + V R L L Q +++ + V + + R K + + Sbjct: 525 LDKMVEILGEETVNRQEFRQLLESGLSQAKVALIPPSIDQVMVGDMERSRLKEIKALFFV 584 Query: 679 GMNDGVYPRQLAPLGFDLMSQK---------PKRGDRSRRDDDRYLFLEALISAQQKLYI 729 G+N+G P+ G + G + + R+ + +KL + Sbjct: 585 GVNEGNIPKSTQTGGILSELDRDFFQEQGVELAPGPKELMNMQRFYLYLNMTKPGEKLIL 644 Query: 730 SYIGRSIQDNSERFPSVLVQELID-YIG----------------QSHYLPGDEALNCDES 772 SY + + P+ L+ + Y+ ++ P + D Sbjct: 645 SYSDTNAK-GEGISPAYLIGSICSLYLKLEIEGGAGVRPHKNSINNYCYPENPEAGIDLF 703 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV 832 ++ H Q + W + + VQ PE + Sbjct: 704 LEKLVQETEKEH--EDIREQADETDAMFGELYSWYLRNPEYRSRVQKLVQSAFAGKPEDI 761 Query: 833 ----------------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILEGL 875 L+RF A F Q +++ R E P D + E L Sbjct: 762 ISQSVAKALYGEVSPYSATRLERFAACAFAHFLQYGMKLTERVEYEFKPMDMGNVMHEAL 821 Query: 876 SRYQ-------INQQLLNALVEQDDAERLFRRFRA-------AGDLPYGAFGEIFWETQC 921 + + L + A+R A E Sbjct: 822 ESFAEEVRKRGMKWTELTEQERNEIADRCLDNIVADYGNTVLKSSARNEYMIERTRRILR 881 Query: 922 QEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGM--Q 979 + + L ++ + E+ + + ++ + + Sbjct: 882 RTVWALQKQLEQGEFQPEGFEVTFGGGRI---DRVDIMEDQNKVYVKVIDYKTGNTSFDL 938 Query: 980 LWLEH-LVYCAS 990 ++L H L Sbjct: 939 VYLYHGLQLQLM 950 >UniRef50_C1RHS2 Exonuclease V gamma subunit n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RHS2_9CELL Length = 543 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 124/549 (22%), Positives = 204/549 (37%), Gaps = 43/549 (7%) Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 L A+ A + + A A + L + L RL F G Sbjct: 1 MLLTAADPTDAWQEVGARAVLADARASAAGADVPLRLPDVVALLEPRLGGRPTRAGFRTG 60 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 + +C+L PMR++P +VVCLLG++DG +PR AP G D++++ P G+R RR +DR LFL Sbjct: 61 ALTVCSLEPMRAVPHRVVCLLGLDDGAFPRAGAPDGDDVLARDPLVGERDRRAEDRQLFL 120 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 +A+ +A L + + G + + R P+V V EL+D + ++ + Sbjct: 121 DAVTAAGDHLVVVHSGADERTGAPRPPAVPVGELLDAVDEAVAFAD---------GRTSR 171 Query: 778 AHLTCLHTRMPFDPQNYQPGER-----QSYAREWLPAASQAGKAHS----EFVQPLPFTL 828 L H D +N+ PG S+ AA+ A PLP Sbjct: 172 GALVVHHPLQTVDERNFAPGALGRPGPFSFDVVDRDAATVARGPRHPRPPLLTAPLPPLD 231 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 V L+ L HPVRAF + RL V E ++ D P L L + +LL A+ Sbjct: 232 DPVVDLDDLVAALEHPVRAFVRRRLGVLVPGEVDDLDDRLPLTLAPLDGWAAGDRLLAAV 291 Query: 889 VEQDDAERLFRRFRAAGDLPYGAF-GEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC 947 ++ D R R G +P G G + + P ++++ + Sbjct: 292 LDGVDLTRAAAAERRRGRVPPGNLGGAALADVATRVAAVAEAAAPVLGAPATTVDVTVPL 351 Query: 948 -NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESR---LFLRKD 1003 +TG +P V D L+R + L ++ W+ L A R R Sbjct: 352 PGDRTLTGTVPGVHGDVLVRAVYARLGAKHRLRAWVRLLALAADPDGPPVRGAATVGRGP 411 Query: 1004 GEWR------FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAM 1057 G P + A L++L+ + APL + + G + + + A Sbjct: 412 GTRPTAATSWLTPPEPDDARRLLAELVTVRDRALCAPLPLPVAAAGTYAHRRHGNDDPAG 471 Query: 1058 LDDDSTLQKARTKFLQAYEGNMMVRGEGD---------DIWYQRLWRQLTPETMEAIVEQ 1108 D Q R ++ E +++ G+G + W Sbjct: 472 ALAD-AEQALRDRYEHTDEYHVLAWGDGFTLAAVAGEPTPADRAAWPDEPTLL----GAL 526 Query: 1109 SQRFLLPLF 1117 ++ L Sbjct: 527 ARTVWDALL 535 >UniRef50_C9KJP7 ATP-dependent nuclease subunit B n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJP7_9FIRM Length = 1210 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 105/695 (15%), Positives = 208/695 (29%), Gaps = 105/695 (15%) Query: 320 SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVC 379 ++E A+ P +LL Q +++ +E R + + Sbjct: 276 AREELAYRGPMPIHLLAE-QHRFA---PQSILHGMEQELFRYGGS--AQSEEQGVQLVEA 329 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 + + EVE +L ++ D R+I ++V D ++Y ++ VF +P+ Sbjct: 330 ANRRLEVESAAADILRLV-RDEGWHYREIGLLVRDGEAYGDLVRLVFEDYG----IPFFE 384 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 +R HP+ E S + + + E V L E + L +V E Sbjct: 385 DAKRPSIHHPLAELMRSAIEVVARDWRYETVFRCLRTGFFPPV----REDIDRLENYVLE 440 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP-YDESSGLIA 558 GIR + + Q W + Y+++ + + L Sbjct: 441 FGIR------GRKRWQ----QQEPWDWHRR-----YSLDDGEQVDEDTASTLALIDSLRR 485 Query: 559 ELVGHLASLLM-------------QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 + V L++L L + L L+EW V Sbjct: 486 QSVEALSALEDALRAADDVRGYTLALYDFLVQLEVPARLQEWAEVAER------EGRLAD 539 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTL 664 A + A+ + + + + LS L+ LD +IS V + + Sbjct: 540 AAEHRQLWDDSMALFDQLVEVSGTEKMTLSDYEAVLSDGLDALQISLIPPGLDYVTLASF 599 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP-------------------KRGD 705 + + +LG + PR++ G + + RG Sbjct: 600 DQNSLDNMRGLYILGADAATMPRRVREQGIFSDADRLHIAETLAAFQKEGEEEHTISRGG 659 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE 765 + +++L A+ L+ISY + + PS LV+++ + ++ +L Sbjct: 660 HEKSFGEKFLLYRGFTEARDYLWISYALADA-EGNGLQPSPLVKKMRELFPKAAFLSIPL 718 Query: 766 ALNCDESEARVKAHLTCLHTR----------MPFDPQNYQPGERQSYAREWLPAAS--QA 813 + + + A L P +EW A Sbjct: 719 ETVRRDDDLLLAAPRPALSGLANALRGEREHQAMQPCWRDVYNWAMGQKEWQRPLQLALA 778 Query: 814 GKAHSEFVQPLPFTLPETV---------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 G +P L E + + ++F P F L++ R E Sbjct: 779 GLFARSGAGRIPKELAEQIFAKGTVLRGSVTQFEKFRQCPFAHFAAYGLKLQERREYQFR 838 Query: 865 PDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEM 924 QLL+A++++ + D+P + E Sbjct: 839 SMD-------------LGQLLHAVLKEYGSIVKRDYANRWQDVPEEKRAALCEELVNTLA 885 Query: 925 QQLADRVIACRQPGQSMEIDLACNGVQITGWLPQV 959 +L ++ R + ++ + Q G L Sbjct: 886 PRLQSEILLSRDNYRHLKKRIEKTAEQAVGHLSAW 920 >UniRef50_C6IZE2 ATP-dependent nuclease subunit B n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZE2_9BACL Length = 1180 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 106/695 (15%), Positives = 215/695 (30%), Gaps = 93/695 (13%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 E E + E S P L+ +++ H S + EVE ++ L Sbjct: 285 PRFRESETLSYLESAYERRSPWPKSEPPQDLEQALSLHRAASRRAEVEGAAREMVR-LAR 343 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 + + RD+ ++V ++ Y + + +PY + + + HP++E + L Sbjct: 344 EEGVRWRDMALLVRNLGDYEELLAPTMEAYG----IPYFLDQKASMLYHPMIEFIRAALD 399 Query: 460 LPDSRFVSEDVLALLDVPVLAARFD-ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + + EDV + L +T E + L + SGI+ D P+ Sbjct: 400 VVLGFWRYEDVFRCVKSEFLLPLDGSLTREHMDVLENYALASGIQGYRWFDGRPWKSAPS 459 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 L + +++ A + G L++ ++ + Sbjct: 460 -------------LSLEQEDQTAASVKAMEQLQLLERCRAAVAGPLSAFEKEIRKAKNAA 506 Query: 579 AQERPLEEWLPVCR-----DMLNAFFLPDAE--TEAAMTLIEQQWQAIIAEGLGAQYGDA 631 + L D+L + + + + ++ + + + Sbjct: 507 DMCAAVFHLLERVEAAQRLDVLAHRMVREGKPRQAMEHRQLWSAVLDVLDQIVEMMGDEP 566 Query: 632 VPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 + L L L L + ++S + V I + RS K + LLG+N+G+ P L Sbjct: 567 LELELFAGVLETGLKELKVSLVPPSLDQVLIGSTERTRSGQVKHLFLLGINEGIMPANLQ 626 Query: 691 PLGFDLMSQKPK---------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 G ++ + G + D+R+L EAL A + L++SY + Sbjct: 627 EEGVLSEQERERLAELGLELAPGLARKLLDERFLIYEALSGASRSLWLSYPAADG-EGGA 685 Query: 742 RFPSVLVQELIDYIGQSHYLP------------------GDEALNCDESEARVKAHLTCL 783 PS +++ + P + + + L Sbjct: 686 LLPSEVIRHVKRIFPGLTERPLLLTPGPASRSADPMASQLEFVSRPGPALNALIGQLRLW 745 Query: 784 HTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH--SEFVQPLPFTLPETV-------PL 834 P ++ E EW A++ + V+ L + + Sbjct: 746 KAGESISPLWWRVLEWYKTRPEWESKAARLLTSLDYRNRVRGLTPATSRRLYGKRLRTSV 805 Query: 835 ETLQRFWAHPVRAFFQMRLQVNFRTEDSEI-PDTEPFILEGLSRYQINQQLLNALVEQDD 893 +++F A P F L++ R PD LS+ I + N Sbjct: 806 SRMEQFSACPFAHFASHGLKLKERQLYRLQAPDIGQLFHAALSQMAITFKAQNRSWGSLT 865 Query: 894 AERLFRRF-RAAGDLPYGAFGEIFWETQC-----QEMQQLADRVIACRQ----------- 936 E + A +L GEI ++ ++++ + R Sbjct: 866 PEEAIQAANSAVDELAPKLQGEILLSSKRYGYISRKLKAIVGRASLILGEQARRGSFEPV 925 Query: 937 ----------PGQSMEIDLACNGV-QITGWLPQVQ 960 P + +L V +I G + +V Sbjct: 926 GQELDFGPGRPLPPLTFELPNGCVMEIVGRIDRVD 960 >UniRef50_B1HN89 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Bacillaceae RepID=ADDB_LYSSC Length = 1169 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 94/656 (14%), Positives = 197/656 (30%), Gaps = 96/656 (14%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 + + E + ++ + + + EV + + L + Sbjct: 275 FYYTQRFQSEDLQHVEANFANMVPHTKKTSGDVMVFEASNRRAEVHAIAREITK-LTREY 333 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 +DI+++ + Y P I ++F +P + ++ HP++E S L + Sbjct: 334 GYRYQDIVLLYRQAELYDPLITSIFQQYE----IPIFTNTKKTMLHHPLIELSRSALEIM 389 Query: 462 DSRFVSEDVLALLDVPV---LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 S + E V + + L A I E L + GI Sbjct: 390 TSNWKYEPVFRSVKTDLFFPLQAELTIWRERADRLENYCLAQGI-----------YGERW 438 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + W + R L E+ S + DE + AE+ + L + L Sbjct: 439 FEEPRWFYKKYRGL----------EFHSRVQTDEERAMQAEIEAIRDEIRQPLKSLQDKL 488 Query: 579 AQERPLEEWLPVCRDMLN--------------AFFLPDAETEAAMTLIEQQWQAIIAEGL 624 + ++ +++ DA + +W ++ + + Sbjct: 489 SIASTGKDIATALFELVESLQVYEKLQAMKDRELERGDALAASEHEQAWNEWINVLDQFV 548 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDG 683 + + L + D S+ V + T+ R KV +LGMNDG Sbjct: 549 YMFGEQEMSVEEAAKILDEGFDTLEFSRIPPTLDEVMVATVDLARLSNIKVAFVLGMNDG 608 Query: 684 VYPRQLAPLGFDLMSQKPK---------RGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 VYP ++ G +++ +R + +LF A + KLY++Y Sbjct: 609 VYPTRMEYEGLLSDTEREWFSQIGYELAPTSSNRLLQENFLFYRAASTPSNKLYLTYPTA 668 Query: 735 SIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH---LTCLHTRMPFDP 791 + S+ +++ I + L G +A + H R Sbjct: 669 DE-EGKALLSSLYIKKFIGNDKIAGLLSGVQAERVVMDPIELLDESALPYLRHPRTALAH 727 Query: 792 ---QNYQPGERQSYAREWLPAASQAGK---------------AHSEFVQPLPFTLPETV- 832 Q Q + A EWL + H +PL + + + Sbjct: 728 LMVQLRQAEHSRELAPEWLALQKFYQQDPYWALIFDRVHYPITHKNEAEPLETYITQELY 787 Query: 833 ------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN 886 + +++++ P F L++ R E E F + L + Sbjct: 788 GQKLTSSVSRIEKYFRCPFSHFTTYGLRLEERAEYRL----ETFAMGDLFHEALK----- 838 Query: 887 ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME 942 E R + L ++ + Q + + +++ + ++ Sbjct: 839 -----WITEETHRLQLSWIRLTKQQIKQLARQAVEQIVPVFSHQILLSSARYRYIQ 889 >UniRef50_C7GAA1 ATP-dependent nuclease n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GAA1_9FIRM Length = 857 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 83/592 (14%), Positives = 170/592 (28%), Gaps = 77/592 (13%) Query: 339 QSDILELENRAVAGVNIEEFSRSDNKRPLDPLD-SSITFHVCHSPQREVEVLHDRLLAML 397 Q + N+ + I +P+ E++ ++ L Sbjct: 279 QRRYANAADLYFMEQNLFRPGAGSYRYKAPEQSMQHIRITSLKNPREELKFAAREIVR-L 337 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 + RDI V+ D+ Y ++ +F ++PY I + HP +E ++ Sbjct: 338 TRENGYRYRDIAVVTGDVQQYGNYVPEIFEQY----HIPYFIDQTKNILFHPFIECIRAI 393 Query: 458 LSLPDSRFVSEDVLALLDVPVLAA---------------------------RFDITEEGL 490 L + + F E V L + + +TE+ + Sbjct: 394 LEMIEYDFSYESVFRFLRCGLASRVVTEAKNSDKEPDPAATEDLTQQPETGSHGLTEQEI 453 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 L +V GIR G + + G L + + +++ P Sbjct: 454 DRLENYVLARGIR-GASRWSRPWTFVMPDGTLEDMARLNEI--------REAVYENFKPL 504 Query: 551 DES-SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 E+ G + L R L E+ L+E + Sbjct: 505 LEAFRGKDNTVSTQTYE----LYSLIRRLDMEQLLKERGNFFEA------HGNQARAKEY 554 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMR 668 I + ++ + + + + D L + ++ V + + R Sbjct: 555 DQIYKIVMDLLDKVTSLLGDETMTIREYSDILDAGFEAAKVGIIPPGNDTVTVGDIERTR 614 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK---------RGDRSRRDDDRYLFLEA 719 K++ +G+NDGV P+ G ++ K G R + ++ Sbjct: 615 LNHVKILFFVGVNDGVVPKAGNQGGIISQFEREKMAEYHLELAPGAREKVFIQKFYLYLN 674 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 + ++LY+++ + D S L+ L+ Q E + + A Sbjct: 675 MTKPSERLYVTFCRVN-SDGKALRRSYLIGTLLKLFPQLAVEEPSEEETLEGALTAESAL 733 Query: 780 LTCLHTR----------MPFDPQNYQPGERQSYAREWLPAASQAGK--AHSEFVQPLPFT 827 + + + AA A K A S+ V + Sbjct: 734 PFLMEGLTKPVEDEEAWTALLAWYLSDEGEREKVMQLFDAAFGAHKDDAISKAVTKALYG 793 Query: 828 LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIPDTEPFILEGLSRY 878 + L++F A + L++ R D + L R+ Sbjct: 794 NTLENSVTRLEQFAACAFAHYLSYGLRLKERELQQFASVDMGNIYHDVLERF 845 >UniRef50_B7AS97 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AS97_9BACE Length = 1091 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 88/576 (15%), Positives = 178/576 (30%), Gaps = 69/576 (11%) Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 S + ++ I L + ++ P L + +RA +E+ Sbjct: 245 SLFAMSKETISSLLRIADESHVEV----APYTLCEHT-----YRFDRAPELAFLEQNMFR 295 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 N R +I + +P+ E++ + +L L + + RDI V+ ADI++Y Sbjct: 296 YNGRVYRDEPENIEIYCGITPKEELQFIAAEILR-LTREQGIRYRDIAVVSADIETYGML 354 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 +F +P + +R ++P++E S +++ +S + E + L + A Sbjct: 355 AANIFEQND----IPAFVDYKRNIMNNPMIEFMRSGIAVIESGYSYESMFRFLRSGITA- 409 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 IT L + GIR + ++ + + L E Sbjct: 410 ---ITPNETDLLENYCLALGIR------GRKRWYSQW-DRNYIKKNREKADLTQLNELRY 459 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 + + P D + + + LL L + E + E Sbjct: 460 RTVKILEPLDRAYTAASGTTVSVGELLEALYEFVAASDIEHKMNELADRLE------LNE 513 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVN 660 + + I + ++ E + + L L++ ++ V Sbjct: 514 ENALASQYRQIYPKVMSLFDEIYSLLGEEKIKRKEFARLLDSGLEEIKVGLIPPTADCVL 573 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP---------KRGDRSRRDD 711 I + R KV+ G+NDG+ P++ G + R + Sbjct: 574 IGDMQRTRLDNIKVLFFAGVNDGIVPKKSENKGILSELDRYILENASVTLSPDARKKAFI 633 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 +R+ L KLY++Y R I D ER PS V+ + + D+ N Sbjct: 634 ERFYLYMNLTKPSWKLYLTYAARGI-DARERRPSYFVRTMYKLYPKLSMRTCDDMNND-- 690 Query: 772 SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET 831 T D + + + + A Sbjct: 691 ----------MWLTIPKADKEWNIKDSQINLVQAAADALYGTDVRE-------------- 726 Query: 832 VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 + L++F + F + L ++ R + Sbjct: 727 -SVTRLEQFASCEFAHFLRYGLGLDERDVYTISASD 761 >UniRef50_UPI00016C0037 ATP-dependent nuclease subunit B n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0037 Length = 1100 Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 97/672 (14%), Positives = 209/672 (31%), Gaps = 86/672 (12%) Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 N+ I + + + +++ C + + E+E++ + D T Sbjct: 255 FANKTADIQFIADNYFATHSIKQPRDSANVRLFACRNFESEIELVAQNITR-FVRDDTYR 313 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 +I ++ +++ Y + V G +PY + + + Q++P + ++LL + Sbjct: 314 YNEIAIITGNLNLYRSHLTTVLGQYD----IPYFLDETKTIQANPAVNFILNLLEVITQH 369 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + +L+ L +L D +E + YL ++ E GI + E E +T + Sbjct: 370 WNLTAILSFLKSGILT---DFADEDIDYLENYLYEHGINYKNKWLEXWEEETDSTLINDL 426 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 R + ++LG Q ++ + ++ ++L L + + + Sbjct: 427 RTRVASIILG--------IEQKIIAHKHRGKILT------SNLCRILYDFLVEINFANTI 472 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 W + + I Q I+ + V ++ + L Sbjct: 473 -RWESKSESEIEHTLSKNFNLALEYKHIYQTILDILDRLVDILGNQYVNIATFKSILTTC 531 Query: 645 LDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF--------D 695 E++ + + + R K+V L+G+N+GV+P + Sbjct: 532 FKHEKVGTIPATQDQILVGEIPRTRLPKQKIVFLIGLNEGVFPANPINDSLFSDMDLTAN 591 Query: 696 LMSQKPKRGDR---SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 L + P + S LI + L+ SY PS++ L Sbjct: 592 LFNANPNLYELFIYSNLYGSELEIYSTLIKPSRYLFASYSMGDD-SGKITRPSIIFTRLK 650 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS- 811 Y P A + K + L + + + YA W Sbjct: 651 RMFT--MYAPSTTATTFADQIYTSKQAIIALGRAIKQNAGIATLDDSYKYALMWYMQHQP 708 Query: 812 --------------QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNF 857 Q K ++ + L ++ + + +++F P F + L + Sbjct: 709 DAIVQTVNGLFFTNQQDKLQTDIAKKL-YSNNQVTTVSRIEKFRRCPCAYFIEYGLLASE 767 Query: 858 RTEDSE-IPDTEPFILEGLSRYQINQQLLNAL------VEQDDAERLFRRFRAAGDLPYG 910 R PD L Y +LL A + D ++L + L Sbjct: 768 RKLFKFRTPDIGTIFHSVLEIYP---KLLQAAGSTWTTITPDAQQQLVATAVSESMLQNN 824 Query: 911 AFG----------EIFWETQCQEMQQLADR------------VIACRQPGQSMEIDLACN 948 + + + +A + ++EIDL Sbjct: 825 KLKIKNGHTKYLTKRIETMSNRAITAMASQLKCGKFVPAEYEYKFNDAALPAIEIDLGET 884 Query: 949 GVQITGWLPQVQ 960 +++TG + +V Sbjct: 885 TLRLTGTIDRVD 896 >UniRef50_C9LTM7 ATP-dependent nuclease subunit B n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LTM7_9FIRM Length = 1151 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 107/759 (14%), Positives = 207/759 (27%), Gaps = 110/759 (14%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRD 309 + Y K+ R L S + NP R Sbjct: 169 LIYSRYREKMAGRYNDTGDMLDALAEKIPSSRLLEGAEVWVDGFSFFNP-------QERK 221 Query: 310 YIYLLSDLESSQELDAFVDVT------PDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 + L + + D T + L Q+ L+ R + I RS Sbjct: 222 ILAALFQKAKNVHITLTFDPTDEAAMQREGSLFYRQAQTLQQLRRLAQEMQIPVRVRSLE 281 Query: 364 KRPLDPLDS--------------------SITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 +R D+ + + + E+E ++ + + L Sbjct: 282 ERRRFQSDALAAIERTAFSFPLVPQAGAAGVALVEAATRRLEMEAAAADIVRLC-REKGL 340 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 RDI ++ D +Y + D +PY ++R HP+ E S + Sbjct: 341 RWRDIAILTRDEAAYGDML----ALTLEDCGIPYFRDNKREGVHHPLAELVRSAFEVLRG 396 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR---WGI--DDDNVRELELPA 518 + + + L F T + L +V E GIR W + D R L Sbjct: 397 -WRYDAMFRALKTGF----FKKTRGQIDLLENYVLEFGIRGSSWTMEEDWHWHRRRSLDE 451 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + + R+ ++V + + + L L Sbjct: 452 EEEGATQKEAERLC------QINSCRRAVAEPLQEFAAQVKAASTVRGYAEALYRLLLAL 505 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 + LE W I +++ + + + + Sbjct: 506 DVPQTLERWADEAEK------AGRLAESREHRQIWDDVISLLEQMAETSGDETIKVREFE 559 Query: 639 DELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 D L LD +IS V + + + +LG N+GV PR+ G Sbjct: 560 DVLGDGLDALQISLIPPGLDYVTVADFDQNSVENARAIYILGANEGVMPRRSQEKGLLSD 619 Query: 698 SQKPKR---------GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 + + G ++R+L + A+ L++SY + P+ L+ Sbjct: 620 ADRLHLKEAGLELPQGSVEGSFNERFLLYKGFTEARDYLWVSYALAD-TEGKALLPASLL 678 Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP 808 ++ + A + +T + G + + Sbjct: 679 GQIRTVLPAVSLQTVPLEGAERRLFAGGRQAVTA---LAAALRSYREKGTLDPFWCDVYN 735 Query: 809 AASQAGK------------AHSEFVQPLPFTLPETV---------PLETLQRFWAHPVRA 847 A K + LP L + + + F A P + Sbjct: 736 WALGERKMSIVLQKVLQGIFSHAAAELLPKELAAALYTKNRRLRGSVTRFESFRACPFQH 795 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDL 907 F + L + R L + L E+ + RR+R G+ Sbjct: 796 FARYGLHLAERPAH---------GFRTLDLGVLLHAALREFGERLKKDG--RRWRDVGE- 843 Query: 908 PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLA 946 GEI E +L + ++ + +++ + + Sbjct: 844 --EECGEILHEILGLLAPRLQNEILLSSKQYENLLVRIE 880 >UniRef50_C6LH76 ATP-dependent nuclease subunit B n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LH76_9FIRM Length = 1162 Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 114/698 (16%), Positives = 207/698 (29%), Gaps = 115/698 (16%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDS-SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 R+ EE +RS P +I+ H +P +E + A+L + + Sbjct: 312 RSANPHTAEETARSGEAEPECASSGCAISLHTAANPVQEAHFAARTIRALLRQ--GYRYQ 369 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 DI V+V D+ SYS +I VFG + Y + R S+P++E ++L + F Sbjct: 370 DIAVIVGDLPSYSSYIPQVFGEY----KIAYFMDSTRTVFSNPLVEFLRAVLDMIQQDFT 425 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 V L + I + L L +V +G+R G WR Sbjct: 426 CASVFRYLRTGLCR----IDAQKLDMLENYVLAAGVR-GFSR---------------WRE 465 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE----R 582 TR ++ L + ++ L L+ + R ++ Sbjct: 466 PFTR----------AVDFLDEEQLALCEELRSLIMEPLLPLVSCMRQARTTAREKTEGLH 515 Query: 583 PL---EEWLPVCRDMLNAF-FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 L DM F AE E I I + +A+ L Sbjct: 516 TLLCHYNIQQQLADMEKQFRADGQAELEKEFAGIYAMVIGIFDKLAELLREEALTLQEYT 575 Query: 639 DELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 + L ++ R+ + V + L R KV+ LG+NDG P A G L+ Sbjct: 576 ELLEAGFEEARVRLIPPSADRVQVGDLERSRLTDIKVLIFLGLNDGWVPATGA--GGGLL 633 Query: 698 SQKPK-----------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 S + R R+ L +++LY+S D S PS Sbjct: 634 SDMERETLMESRVELAPTTRQNSYIQRFYLYLNLTKPRERLYLSCSKA-TADGSLLRPSY 692 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF-DPQNYQPGERQSYARE 805 +++ + D + + L L F + QP Sbjct: 693 VMRTIGRLFPGLSVHDEDVCESFSSRVETPQNALAYL--LEGFWSIRERQPSGEWLELYN 750 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPET----------------VPLETLQRFWAHPVRAFF 849 W K V+ T E+ + L++F + F Sbjct: 751 WYRRKEDTKKQVQRLVEAAFLTFDESGIGRKAARELYGEVLVNSVSRLEKFASCAFAHFL 810 Query: 850 QMRLQVNFRTEDSEIP-DTEPFILEGLSRYQ----------------INQQLLNALVEQD 892 Q L++ R E P D + Y + + + V + Sbjct: 811 QYGLRLQEREEYVFRPVDMGRVFHSAIELYSRKVEESGYDWFRIPEEVRDRFIEEAVNEV 870 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR-------------QPGQ 939 A + + G + + L ++ + + + Sbjct: 871 SAAYGQQILHDSARN-EAMIG-RMKRIMRRTVWALHRQIQSGHFYPANFEVSFSQAEELE 928 Query: 940 SMEIDL-ACNGVQITGWLPQVQ---PDGLLRWRPSLLS 973 ++ I L +++ G + ++ + + + Sbjct: 929 AVNIALSPEEKMRLQGRIDRIDVCEKEEQVYVKVIDYK 966 >UniRef50_B0NWV1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NWV1_9CLOT Length = 1126 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 77/550 (14%), Positives = 175/550 (31%), Gaps = 61/550 (11%) Query: 347 NRAVAGVNIEEFSRSDNKRPLD---PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 + ++ + P + I +P++E + + + + Sbjct: 282 PDERDSKELRHLEQNIERYPYEIYKDEPEDIKIRCFMNPRQESRTVANEI-ERFVREEGY 340 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 +DI+V+ AD+DSY ++ F D ++PY + R ++P +E +S+L + Sbjct: 341 RYKDIVVLTADLDSYQNELEKSF----DDLHIPYFVDVNRKLLNNPCIETLLSVLKMIQK 396 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 F + V L + T E +L +V GIR + +L + Sbjct: 397 DFSYDMVFRYLKSGF----SNFTMEEADFLENYVLACGIRGFARWNRPFASKLFSDEDVG 452 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 L + + + + L+ L + L E Sbjct: 453 RAEALR--------------IRFIEEVGTLKTGLKRRGSTVKRKLIYLYEFLETLDVEGK 498 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 + + + D A + +Q ++ + + + L Sbjct: 499 MVKKQEMFEA------SGDLIAAATYAKVYEQVIDLLEQMAEILGEEKLSYDDFLSVLES 552 Query: 644 RLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 L++ +I + V I + R+ K++ LG+N+GV P G +++ + Sbjct: 553 GLEEMQIGVIPPSLDQVMIGDMKRTRTEEVKILFFLGINEGVIPAA--NGGGGVVNDHQR 610 Query: 703 -----------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 G + +++ + +LY+SY N+ R PS ++ + Sbjct: 611 EVLETYGINLAPGIKQSAYMEQFYLYLTVSKPTDRLYLSYRMMDAAGNNNR-PSYFIERI 669 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ------------NYQPGER 799 + +E + ++ + M FD + Y + Sbjct: 670 QRIFPKLKVTMQEEEVQTGYTKEEALDQMILCLQEMEFDERDDDPEKMKWMQTLYHALKE 729 Query: 800 QSYAREWLPAASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQVNF 857 +++ A +A + + +T+ + +++F F Q L++ Sbjct: 730 LEPVGDYVDARFYTNQALPLSKELIHDLYGDTISGSVTRMEKFAGCAFSHFMQYGLRLRK 789 Query: 858 RTEDSEIPDT 867 R +P Sbjct: 790 RLVHEILPTD 799 >UniRef50_C4G1J6 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G1J6_ABIDE Length = 1133 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 126/903 (13%), Positives = 268/903 (29%), Gaps = 143/903 (15%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQ--MTLSQKFGIAANIDFPLPASFIWD 71 L + +E +P + ++V Q + + LS+ I NID + Sbjct: 15 SELCFNKIVKEAEKNPDKNYFVIVPEQFTLQTQKDLVRLSRAKAI-MNIDVLSFMRLAYR 73 Query: 72 MFVRV-LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSK 130 +F + + E K + KL+ L + L + + ++ K LS Sbjct: 74 VFEELNIKERLILEDTGKNMVIRKLLGGLKEELCFYKNAVGK---QGFTEDLKSL-LSE- 128 Query: 131 AADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLY 190 F QY + PD L + + L A +++A Y + Sbjct: 129 ----FMQYGIT-PDNLTKIKEKTSSPVLAAKLQDAALVYRAFNNYKKEKYISA------- 176 Query: 191 QRFIETLESATTCPPGLPSRVFIC-GISALPPVYLQALQALGKHIEIHLLFTNPCRYYWG 249 ++ +E L + + L + V G + PV L+ + L E L Sbjct: 177 EQILEVLANEISRSKLLENSVICFDGYTGFTPVQLKVIDLLLVKAEHLLFTLTVSE---- 232 Query: 250 DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD 309 D + + + L +D Sbjct: 233 ---------------------------------KDYYSEEDEKFRLFH--------LSKD 251 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 I ++ L + ++ VT + + R + P+ Sbjct: 252 TINKINKLAGERGVEVARPVTAE---------------FCGKVKALSLLERQIFRYPVKK 296 Query: 370 LD--SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 D +S+ +VC +P+ EVE L +L+++ D L RDI V++ D++ Y + Sbjct: 297 TDSENSVRINVCKNPREEVERLIPDILSLV-RDEGLRYRDIAVVLGDMEEYGEMVV---- 351 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + + +P + ++ +P +E + L + + F + V+ L ++ Sbjct: 352 DTLSSKGVPCFLDSKKTIADNPFVEYIKASLLVVEENFSYDAVMRYLRSGF----ANVDV 407 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + ++ GI+ G ++ A+ + + GL Sbjct: 408 YEVDIFENYILRRGIK-GFRRYQTSFIKDEASEEESISEGLR-----------VTLVDEF 455 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 P + + L + E L + + Sbjct: 456 KPLYDILKSKKSKAE---DFVKALYEFVSASGSEERLMKLSADFEE------KGKMIAAR 506 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMP 666 + ++ + + + + R L + + + I + Sbjct: 507 EYAGCYRIVMSVFEKMYELLGDEKLSIEEFRSILESGFSEGKAGFIPPGLDQIVIGDVER 566 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG---------DRSRRDDDRYLFL 717 R KV+ LG N+G P+ + G ++K K + R +++ Sbjct: 567 TRLKDIKVLFCLGFNEGKVPKSVGARGIITDTEKEKLAGMNVELAPTAKERAFREQFYIY 626 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN-----CDES 772 ++LY+SY ++ + PS ++ L Q E ++ + Sbjct: 627 MLFSKPTERLYVSYSSSNM-EGKPIKPSSVINRLRAVFKQEIVSEPTEEVSLINEIRKDG 685 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ-AGKAHSEFVQP-LPFTLPE 830 + N Y + KAH ++ + L Sbjct: 686 GMELILSAIKKRDLKDSTVINLIKYYNCHYDDRYNKIIEGTVSKAHGNSLEKYIATELYG 745 Query: 831 TV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 + + L+ F + F + L++ R E F L+ + I ++L Sbjct: 746 ELKGSVTRLELFSSCAYAHFIKHGLRLKERKE---------FELKPMDIGNILHEILERF 796 Query: 889 VEQ 891 ++ Sbjct: 797 AKK 799 >UniRef50_C0CPC7 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CPC7_9FIRM Length = 1111 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 88/664 (13%), Positives = 187/664 (28%), Gaps = 69/664 (10%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 + +E+ ++ + ++ +P +EV+ +L ++ + + Sbjct: 282 KNPELNFLEQHLFRYHRVVYEREPQALALTRWENPLQEVKGTAAEILRLV-REKGYRYGE 340 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 I V+ D+ SY + + VF A +PY I ++ + +P +E + + + RF Sbjct: 341 IAVITGDLPSYGTYARQVFSQA----QIPYFIDEKHSILMNPFVEFLRAAVEMIVDRFSY 396 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 E L ++ E + L +V GIR P + Sbjct: 397 ESCFRYLRCG----MSSLSLEEIDELDNYVTALGIRGYSKWKETWVRLYPGLDEERILE- 451 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 L R + ++ Q + + E L + + ++ ++E Sbjct: 452 LNRYREQF-LKEISWLVQG---FRGGVKTVRERSCALYQFISD-----NEMQEKLKIQE- 501 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 L D E I ++ + + + V + L L + Sbjct: 502 -------LEFAGRKDKAMEKEYAQIYGIVMRLLDKMVEILGDEKVSAREYQQLLEAGLTE 554 Query: 648 ERISQRFL-AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP----- 701 +++ + V + + R KV+ LG+N+G P+ + G + Sbjct: 555 AKVALIPPSSDQVLVGDMERTRLKEIKVLFFLGVNEGNIPKDSSRGGLLTQMDREFFQEE 614 Query: 702 ----KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 R R+ L Q LY+SY + + + LV + Sbjct: 615 KIELAPDARELLGQSRFYLYLNLTKPQDFLYLSYSQANAK-GEGLSAAYLVGTIQKLFPA 673 Query: 758 SHYLPGDEAL-----NCDESEARVKAHLTCLHTRMPFDP-----QNYQPGERQSYAREWL 807 G + S L + YQ E L Sbjct: 674 LRLRCGQGSSLEGLQRPSGSLDYFLEGLQEYEYGQETKVWRELYRWYQKDESYRPQVNRL 733 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPL---ETLQRFWAHPVRAFFQMRLQVNFRTEDS-- 862 A + + + L V L+++ A F + LQV R + Sbjct: 734 VEAFFSENPQDRISKAVAKALYGEVSPYGATRLEQYAACAFAHFLRYGLQVTERVQYEFS 793 Query: 863 -------EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFG-- 913 E F + + +L E+ +E L G+ + Sbjct: 794 GMDLGNVMHKALEIFARKVRDQRLSWGELSREDRERLVSESLQEVTEDYGNTILHSCARN 853 Query: 914 ----EIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRP 969 + L +++ + E+ + + + + + + Sbjct: 854 EYLIRRTQRVLNRTAWALQEQLRRGDFQPEGFEVAFEGGRI---DRVDICEDENKVYVKV 910 Query: 970 SLLS 973 Sbjct: 911 MDYK 914 >UniRef50_B0NKJ8 Putative uncharacterized protein n=8 Tax=Clostridiales RepID=B0NKJ8_EUBSP Length = 1141 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 88/664 (13%), Positives = 185/664 (27%), Gaps = 83/664 (12%) Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 +E + + SI HV +P+ E + + A++ R+I V+V++ Sbjct: 291 LERNLFRYHGKGFGKEPESIGIHVTRNPKEEAMAVAGAIRALV-RKEGYRYREIGVIVSN 349 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 +D Y ++ F +P + +R+ + +E SLL + + F E V L Sbjct: 350 MDVYGDDLEQAFAMYE----IPAFMDHKRSILLNSFVEYIRSLLDMAEQNFTYESVFRFL 405 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGI----RWGIDDDNVRELELPATGQHTWRFGLTR 530 + + + L +V GI RW + R + R Sbjct: 406 RTNL----AGFNFDEVDRLENYVIGLGIKGYKRW-QEKWVRRLKGMEEEELEALNHC--R 458 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 ++L V D ++ + + + M L + + L Sbjct: 459 IIL-------------VEKVDGLLYVLKQRSKTVRDITMALYEFMVREDLQVKLAALEER 505 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 + + + + + + + V L+ L L++ R+ Sbjct: 506 FQA------EGKLALAKEYAQVYRIVIELFDKFVELLGDEKVSLNEYCKLLDAGLEEARV 559 Query: 651 SQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK------- 702 + V + R K + +G ND P L G + K Sbjct: 560 GVIPPSVDQVVAGDVQRTRLKDIKALFFVGANDTYLPGSLLRTGLLSERDREKFARERLS 619 Query: 703 --RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 G + + ++ L ++L I Y S D PS L+QEL Sbjct: 620 LSPGGKEQAYIQKFYLYMNLTKPSEQLNIYYSKVSA-DGKSIRPSYLIQELRRLFP---L 675 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPF-------DPQNYQPGERQSYAREWLPAASQA 813 L + + + + + F D + + +W Sbjct: 676 LSVQDEEGRALALREITEKMGIGYLIRGFQGNGEGMDAAWKELYTWYKKSPKWQSKVESL 735 Query: 814 GKAH--SEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 KA + L + + + + ++RF F L + R E Sbjct: 736 IKAGYYRRPMDGLTEAVAKRLYGEEFEDSITRMERFQTCAFAHFLTYGLNLQERQEYDFQ 795 Query: 865 P-DTEPFILEGLSRYQ------------INQQLLNALVEQDDAERLFRR--FRAAGDLPY 909 D L R+ + ++ + +++ E + Sbjct: 796 AVDMGNVCHNALERFSRKVEKEGCGWVGLKEEKRASFIDESVEEAITDYGNSVLYSSARN 855 Query: 910 GAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRP 969 + + L ++ A + E A + + + + + Sbjct: 856 EYMIVRMKRMLERTVWALTKQLSAGDFQPSAYEFRFANGKI---DRIDTCEDGDKVYVKV 912 Query: 970 SLLS 973 Sbjct: 913 LDYK 916 >UniRef50_Q03D70 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Pediococcus RepID=ADDB_PEDPA Length = 1192 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 97/713 (13%), Positives = 209/713 (29%), Gaps = 115/713 (16%) Query: 335 LHNIQ--SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR 392 LH ++ SD+L+LE + + +T +S EVE + Sbjct: 284 LHRVRVNSDLLKLEKYWIESSEGQVGGSKQENNAC------VTIFQANSRYAEVEHVATL 337 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 + + +DP+L D V+ + YS I+ +F LP + A + HP+LE Sbjct: 338 IRQKMAKDPSLKFSDFSVLTRHLSDYSTIIKPIFDQME----LPIFYDLQIAMKDHPLLE 393 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL------RQWVNESGIRWGI 506 +L + F EDV+ LL +L + G+ + +V + GI +G Sbjct: 394 LINALFDIRAHHFRYEDVMRLLKTGLLFPETEDDPHGMDFFKSVHITENYVLKQGI-YGD 452 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 ++ + ++ + + + + + + + Sbjct: 453 RWLQKKDWKYSRFND---------------IDEEKQTDEEIEINQRINTVKNYVAETVVP 497 Query: 567 LLMQLNIWRRGLAQERPLEEWL------PVCRDMLNAFFLPDA-ETEAAMTLIEQQWQAI 619 QL+ G+ + L ++L + + A + + + Sbjct: 498 FFNQLSTATTGVEAAKALYDFLIKNGIDQCLLAWRDQWIEEGRLAKAAEPEQTWETFIQM 557 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLL 678 + E + L + SQ + + ++ + K+V ++ Sbjct: 558 LDEFVDILGDQPFDPDNFMGLLNAGFEGATYSQIPSTLDQILVSESGMVQMVDRKIVFII 617 Query: 679 GMNDGVYPRQLAPLGFDL------------MSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 G D V P Q+ F Q + + + + YL + + Sbjct: 618 GATDRVMPEQIQDNDFLNQDGKNQIDPFLDDDQFLRISNDRQMRQEPYLNYLTFMIGSDE 677 Query: 727 LYISYIGRSIQDNSERFPSVLVQELIDYI----GQSHYLPGDEALNCDESEARV---KAH 779 L SY +S D E S V+ + + P E + D + Sbjct: 678 LIFSYP-KSGNDGVELKISPYVERIGKHFGIIAQSLPSRPTTEPVRLDPPFIELFIGSNR 736 Query: 780 LTCLHTRMP----------FDPQN------YQPGERQSYAREWLPAASQAGKAHSEFVQP 823 T H DP+ + S + L + + Sbjct: 737 STLSHLIQYARAMHEAKSEADPRWNLIYTILRQSTLGSLTDQLLSSLEYKNIPEKLKPEI 796 Query: 824 LPFTLPETV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT-------------- 867 + +T+ + L+ F+ + F + L++ R P Sbjct: 797 VEGLYGDTIYASVSKLEEFYRNEYSYFLKYGLKLQERETSDLSPADTGQYFHAAMDKLIK 856 Query: 868 ----EPFILEGLSRYQINQ---QLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQ 920 E +++ QI Q +L+ + + ++ +R + Sbjct: 857 MITTENLNFNEVNQEQIEQIAKRLVQQMEQDQQFDQFNGTYRMG----------FLRKQL 906 Query: 921 CQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLS 973 + +Q + + + + I Q+ G + L ++ Sbjct: 907 DRTVQAMVEAIFKQLARTRMRPI----ASEQLFGQIGSQSGLPALNFKVGEGK 955 >UniRef50_UPI00019738F1 ATP-dependent nuclease subunit B n=2 Tax=Clostridium RepID=UPI00019738F1 Length = 1184 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 132/983 (13%), Positives = 276/983 (28%), Gaps = 168/983 (17%) Query: 65 PASFIWDMFVRVLPEIPKE-----SAFNKQSMSWKLMTLL----PQLLER-EDFTLLRHY 114 P F ++ P + + +++++ L P +L+ +LR Sbjct: 39 PEQFTMQTQKDIVAMHPCHGVRNIDIVSFERLAYRIFEELAVETPAVLDDMGKSMVLRKV 98 Query: 115 LTDDSDKRKLF-----------QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA 163 + +LF +L S ++ F QY + + L + G L + + Sbjct: 99 AAGRKKELRLFGSHLDKSGFIGELKSMMSEFF-QYGIT-GEALKEMAEGTQSAMLRQKLS 156 Query: 164 WQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVF-ICGISALPPV 222 + L++ EYT R + ++ L + V + G + PV Sbjct: 157 DMSELYEGFREYTKD-------RFIAKEEILDILCRVIPRSELIKDSVVTLDGYTGFTPV 209 Query: 223 YLQALQALGKHI-EIHLLF-TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 + L+ L + ++ + NP R + Sbjct: 210 QYRLLELLLTYCRQVTVTITMNP----------------EENPYREKPIQHLFHLSSHTV 253 Query: 281 ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS 340 L S G + LL + F + L I+ Sbjct: 254 CRLTDLAASSGAGRTEDILL-------------------KGDCPRFRESPE---LSKIER 291 Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLD-----PLDSS-ITFHVCHSPQREVEVLHDRLL 394 ++ R +E + ++ P S + H +P RE++ + ++ Sbjct: 292 ELFRYGRRGEQKEGKQEEGKRKEEKQNQTGCGAPHRKSGLILHQAENPIREIQFVCAQI- 350 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 L + RDI V+ + YS + F + +P + ++ +P++E Sbjct: 351 ERLVKKEGYRYRDIAVVTGALSDYSGELTRQF----QENKIPCFLDSKKNILGNPMVELL 406 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 + + F E V L + E L L +V GIR ++ E Sbjct: 407 RASMETLTEDFSYESVFRYLKTGMAVE----DVEKLSRLENYVKALGIRGYKRWNSRWER 462 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 + L E + P E + + + L + Sbjct: 463 VYRDGEL---------LNLDELNEFREQIVAPFRPLREVFSDRSSS---VREMTAALVHF 510 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 + E L EW +M +AE E + I + + V Sbjct: 511 LEEIHAEEKLGEWEKRFSEM------GEAELEKEYSQIYGLVMELFDRVAALLGDEVVSR 564 Query: 635 SLLRDELAQRLDQERISQRF-LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L ++ ++ + V L R K + +G+NDG+ P + G Sbjct: 565 REYAQILDAGFEEIKVGLIPAVVDRVVAGDLTRTRLSHIKALFFVGVNDGIVPSAVRRGG 624 Query: 694 FD------LMSQKPKRGDRSRRDD---DRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 L+ +K + R++ +R + L++++ S P Sbjct: 625 ILTEAERRLLKEKGVELAPTAREEGFLERLYLYLVMTKPSDTLFLTWSQTSAA-GKGLRP 683 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD---PQNYQPGERQS 801 S L+ ++ + DE S + L P+ + R Sbjct: 684 SSLIGQVKSLFPELTETRSDEFEEAAWSLPAGRRALIGGLRERSASSSQPKFLELYRRFY 743 Query: 802 YAREWLPAASQAGKAH--SEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMR 852 + + +A S + + T + + ++R+ A F Sbjct: 744 TDSGYREMTRRLVEASFCSYEDRGIGRTAAGRLYSPILRGSVTRMERYAACAYAHFLNFG 803 Query: 853 LQVNFRTEDSEIPDT---------EPFI------------LEGLSRYQINQQLLNALVEQ 891 L++ R E + F L R ++ + ++A+ + Sbjct: 804 LELRERREYELAAADIGNMFHSSIDLFFKTMKEEGRSFRTLSPEDRKELVGRCVSAVTAE 863 Query: 892 DDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL------ 945 + R G + + L +++ E+ Sbjct: 864 YGNTVVSASSRNE------YLGRRVERITDRTVWALTEQLKKGDFEPAGFELTFTPADNL 917 Query: 946 --------ACNGVQITGWLPQVQ 960 V + G + ++ Sbjct: 918 KAMKIPVSRTEAVHLQGRIDRMD 940 >UniRef50_C4Z990 AddB n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z990_EUBR3 Length = 1156 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 89/656 (13%), Positives = 187/656 (28%), Gaps = 80/656 (12%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRP---LDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 IL+ R + + ++ I P++E+ + R+ ++ Sbjct: 273 ILDKNYRLAENEELSFMEQQLFRKRRSSFKKAPKHIHIDCLRDPKQELTKIARRINELV- 331 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 + L RDI ++ D++ Y+ +++ +F +PY I + HP +E S+ Sbjct: 332 RNENLRYRDIAIVTGDVNIYAGYVREIFDKY----NIPYFIDATQEILFHPFIEFIRSIP 387 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + F ++ V L +++ + L +V G+R G + + + LP Sbjct: 388 DIAAQNFSADAVFRFLRCGFT----ELSASEIDVLENYVLACGVR-GKSAWDKKWVRLPK 442 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 G LL + E + V + ++ + L Sbjct: 443 HK-----AGYDIELLNQSREYIMELLKPVYQVFSDKKS------TVKDYVLAIYKLIVLL 491 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 L + D D I + + + + + + Sbjct: 492 DIPDKLAKKEQALLD------AGDQTASKEYGQIYKIVMQLFEKYVAVLGDECMDAEEFT 545 Query: 639 DELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 L LD ++ V I + R KV+ G+NDG+ P+ G Sbjct: 546 QILDAGLDAADVAVIPPGYDTVTIGDIERTRLTNIKVMFFAGVNDGIVPKAAGRGGIISQ 605 Query: 698 SQKP---------KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 ++ G R + R+ + ++LYISY + PS L+ Sbjct: 606 YEREALKELDIELAPGAREQAFIQRFYLYLNMTKPSRELYISYTRLD-SEKKAAQPSYLI 664 Query: 749 QELIDYIGQSHYLPGD--EALNCDESEARVKAHLTCLH----------TRMPFDPQNYQP 796 L + + E L S +L M +D Sbjct: 665 GILKGMFPELVVTETEDVEQLLDISSRQSALDYLLSNEVDDRWCEIAAAVMFYDASVSDA 724 Query: 797 GERQSYAREWLPAASQAGKA-----HSEFVQPLPFTLPETV-------PLETLQRFWAHP 844 G+ + + + P+ + ++ + ++F Sbjct: 725 GDGNEVDDKAFTQKNSVERLINARFEHYSKDPISRNVARSIYGRHMEGSITRFEQFARCA 784 Query: 845 VRAFFQMRLQVNFRTEDSEIP-DTEPFILEGLSRY--QINQQLLN---------ALVEQD 892 F L++ R E D E L RY +++++ + + + Sbjct: 785 YAHFLNYGLRLTEREESGFTSLDMGNIYHEALERYSKKLDRESTDWFSVTDAKRDELAME 844 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWET---QCQEMQQLADRVIACRQPGQSMEIDL 945 + + G Q + L ++ + E Sbjct: 845 AINEVIDEYAGFGIFDTAESQHSISHMKAVFKQTVWALTTQIRRGSFVPERFEFSF 900 >UniRef50_B9XFA2 ATP-dependentnuclease subunitB n=1 Tax=bacterium Ellin514 RepID=B9XFA2_9BACT Length = 1129 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 163/1044 (15%), Positives = 299/1044 (28%), Gaps = 154/1044 (14%) Query: 65 PASFIWDMFVRVLPEIP-----KESAFNKQSMSWKLMTLL----PQLLERED-FTLLRHY 114 P + + ++L + + + +++ + L PQ+L+ E +LR Sbjct: 40 PKQTTYQLERQLLAYPSVAGYTRLQILSFERLAFFVFNSLQKPPPQMLDEEGRLMVLRSL 99 Query: 115 LTDDSDKRKLFQLSSKAADLFDQYL--VYR--------PDWLAQW-ETGHLVEGLGEAQA 163 L D+ KLF+ S++ A F Q+L V R P+ L + E H VEGL Sbjct: 100 LARKRDELKLFRASARLAG-FAQHLSRVLRELQHHQLTPESLHELAEQVHAVEGLSYKLH 158 Query: 164 WQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVY 223 L L +Y L + F + P +++ G + L P Sbjct: 159 ---DLGTMLRDYLDWLQAHHLQDGDNLLTFATEVLREPHAPLNFGE-MWVDGFTDLSPQE 214 Query: 224 LQALQALGKHIE---IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 L L + H+ + D ++ L DR F Sbjct: 215 LDLLAQIIPHVPQATLTFCL---------DQVPTERISWLSNWSVPRRTYDRCQKRFAGL 265 Query: 281 ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS 340 N LLA + R L++ Sbjct: 266 PNVELSKE----------LLAR--HMNRS--RFLNNSP---------------------- 289 Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 L + + F + L S+ C +P+ E + +L + Sbjct: 290 ----LHHLEQHWAEPKPFVDAATAARPYSLRESLRVITCTNPEAEATLAAREVLRFVRSG 345 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 R++ ++V +D+Y + F +PY + R A HP+ E + L Sbjct: 346 G--RFREVTILVRKLDNYHEALANTFKRYD----IPYFLDRREAVSHHPLAELTRNALRT 399 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 + +D A L ++ A + + L G W L Sbjct: 400 VAFSWSRDDWFAALKTGLVPA----EDTEIDRLENEALARG--WKGSTWQHPILIHDNPE 453 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 W L R ++ ++++ L L + + L Sbjct: 454 LTEWAENLRRKIV--------PPFKNLAVNMGQQSNRPSG----RHLAAALRDFWQSLKV 501 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 + L+EW ++ P + +Q A + A + +PL Sbjct: 502 DETLQEWSDAEIAGSDSQLAP-----PIHLTVWEQMNAWLENVELAFPTETLPLREWLPI 556 Query: 641 LAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 L L + A V I + R+ ++ +LGMN+GV+P + Sbjct: 557 LEAGLANLNVGVIPPALDQVLIGAIDRSRNPDIRLALVLGMNEGVFPAPPEQSVLLTDAD 616 Query: 700 KPKR---------GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 + + R + +RY A A+Q++ ++ PS + + Sbjct: 617 REELKKKDVELGASTRQQIGHERYYGYVACTRARQRVVLTSAIFDAA-GKPLNPSPFLSQ 675 Query: 751 LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 L ++L+ +S + L P + G L A Sbjct: 676 LKQLFPSLETETFPKSLDWRKS-EHANELIVPLLRNQVQSPISKVQGVSALNKFPALAAL 734 Query: 811 SQAGK--AHSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTED 861 + K + + + L L E + + +++F A P + F L+ R + Sbjct: 735 RERLKHFSTTPTEESLSPELAERLYGPALRTSVSRMEQFAACPFKFFVHSGLRAEERKK- 793 Query: 862 SEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC 921 F L+ + ++L + EQ E R + I Sbjct: 794 --------FELDIRDQGNFQHEVLASFHEQLKTEN-KRWRDISPQEARERIKSIALTMMV 844 Query: 922 QEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLS---VAQGM 978 L R + + L + GW+ Q + P + Sbjct: 845 SYRDGLLQVSEETRFTARVLTESLQDFVETLVGWMGQQYA-----FDPKAVELPFGEDLF 899 Query: 979 QLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVL 1038 W L G L + +E A L +++ Y+ +L Sbjct: 900 PAWELEL------GKDHKLLLHGRIDRIDICR-ESEDAEEALCVVVD-YKSSQKQLDPLL 951 Query: 1039 PESGGAWLKTCYDAQNDAMLDDDS 1062 E G Y D Sbjct: 952 MEHGLQLQLAAYLNVLRHWPDPRP 975 >UniRef50_A9KTE7 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Clostridium phytofermentans ISDg RepID=ADDB_CLOPH Length = 1147 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 100/676 (14%), Positives = 192/676 (28%), Gaps = 72/676 (10%) Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 N + R K + D I+ P E + +L + Sbjct: 282 YRFHNSMALSALEKNIFRYPYKSFTEEQDD-ISITAAKDPMAEARHAVIEITRLL-REEE 339 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 +DI ++ ++ Y ++ +P + ++ ++PV+E S L + Sbjct: 340 YRYKDIAIVSGAMEVYGDIVK----RELELAGIPCFVDHKKNILTNPVVEFLRSALDVVT 395 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 F E + L + D T + + +V GIR E E + Sbjct: 396 HNFDYEAIFRFLKCGLT----DFTMDEIDLFENYVIAFGIR----GKYRYEHEWERKYKT 447 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 + L ++ Y + + P E + + + L E Sbjct: 448 NYEVDLEKI--NYV---RECILKEFTPLYE---TLTSKKSSVRECVNALYNLLCTYHIEE 499 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 + ++ + D I + I + D +PL RD L Sbjct: 500 KIHIFVEKFKAQGE---KEDKLRAKEYEQIYRMVLEIFDRMVELLGEDVLPLKEFRDILD 556 Query: 643 QRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD------ 695 + ++ + + + + R K + LG+NDG+ P+ G Sbjct: 557 TGFREAKVGLIPPSIDQILVGDIERTRLKDIKALFFLGVNDGIVPKANPGGGILSDAERQ 616 Query: 696 LMSQKPKRGDRSRRD----DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 L + ++R + YL+L L Q KLY+ Y + S L+ ++ Sbjct: 617 LFADHEIELSPTKRQTAYLTEFYLYLN-LTKPQNKLYLYYSKLDV-SGKSIRASYLLGKI 674 Query: 752 IDYIGQSHYLP------GDEALNCDESEARVKAHLTCLHTRMP-FDPQNYQPGERQSYAR 804 + DE L D+ + + + L P + Y Sbjct: 675 SKIFPKLKIYDADRKSREDELLGTDQGLSYLISVLRDYEGEQPKLWREVYHLYVSGQIKG 734 Query: 805 EWLPAASQAGKAHSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNF 857 G + + Q L + + + ++++ A F Q L + Sbjct: 735 RISLDKVLQGVFYQNYEQGLTKEVARKLYGETLLGSVTRMEKYAACAFAHFLQYGLSLEE 794 Query: 858 RTEDS-EIPDTEPFILEGLSRYQ-------INQQLLNALVEQDDAERLFRRF-------R 902 R E +PD E L R+ I+ L V ER R Sbjct: 795 RQEYKISMPDIGSLFHEALERFSKALKELDISWHELPEDVRISLGERCVREAVENFGNGI 854 Query: 903 AAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG--VQITGWLPQVQ 960 + + L ++ S E + + + G + +V Sbjct: 855 LESSKRSAYLATRVERILQRTTKTLTHQLQQGVFEPGSYEQYFSHADRYLNLRGRIDRVD 914 Query: 961 ---PDGLLRWRPSLLS 973 DG L + Sbjct: 915 LYEQDGKLYVKVIDYK 930 >UniRef50_B0PD61 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PD61_9FIRM Length = 1106 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 105/628 (16%), Positives = 191/628 (30%), Gaps = 67/628 (10%) Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 I + + P D + C E+E + + A++ + RDI ++ Sbjct: 279 IAQAYPQETPAPYDGAPDGVQIAACEDVYDEIEYIAGEICALV-REKGYRYRDIALIGRA 337 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 ++ Y ++ VF +PY R Q HP++ L RF SE VLAL Sbjct: 338 LEPYLVPLETVFARYD----IPYFADRRVDIQVHPLVNGIFCALDAVRGRFDSEAVLALA 393 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 I L + WG+ + + Sbjct: 394 KT----CISGIDAVEAGLLENYC----FTWGVSGTVWAAPFVNHPDG-----------ME 434 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 A Q + A L+G L L L G R + +L Sbjct: 435 GAFSDEQ-----RERLSRINAARAALIGPLERLADSLRG-CDGRGFARAIYSYLEQVDAA 488 Query: 595 --LNAFFLPDAETEAAM-----TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 L + E +A + ++ GA G ++PL+ L D L + Sbjct: 489 CRLRDYAEGMEEGDARRFLDLSAQVWDAVIGLLDVFGGALAGISLPLARLTDLLRLGVST 548 Query: 648 ERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR--- 703 I V T +R + V ++G+N+GV+P +P G +++ + Sbjct: 549 VDIGSLPQTIDQVIAGTADRIRPNAPRAVFVIGLNEGVFPLWSSPSGIFSAAERERLRTQ 608 Query: 704 -GDRSRRDD-----DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI-- 755 D R + +RY AL A + L+++Y R + R S V E+ + Sbjct: 609 GVDLLRTPEQTALFERYYVYFALTQASEALWLTYPLRDAA-GAARTASSAVDEVRALVGA 667 Query: 756 --GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQA 813 S A + + H + + A +A Sbjct: 668 PARGSAGGALARAAGERSAFDAMMRHWRDDTPETAVLRSYFTEQDPARIRTLEALGAPRA 727 Query: 814 GKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP----DTEP 869 F + + ++ P F ++ L++ R P Sbjct: 728 FSLEGRGAARALFGTRMRISPSRAELYYECPFSYFCRVGLRLRPRRRAEFNPIESGSLIH 787 Query: 870 FILEGLSRY-------QINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQ 922 +LE + + Q+N +LL + + L R ++P A + + Sbjct: 788 LVLEKIVKKYGGRGLAQLNGELLRSEITAIIDADLKARIANYDEMP--ARFKYLFRRLVG 845 Query: 923 EMQQLADRVIACRQPG--QSMEIDLACN 948 +Q+L +R+ + +L Sbjct: 846 TIQRLIERLALEFGQSAFEPAAFELPIG 873 >UniRef50_Q0AXV2 DNA helicase/exodeoxyribonuclease V, subunit B n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXV2_SYNWW Length = 1124 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 103/693 (14%), Positives = 202/693 (29%), Gaps = 110/693 (15%) Query: 337 NIQSDILELENR------AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLH 390 +Q +I++++ R + ++E + + +I + EVE L Sbjct: 261 ALQEEIIQVDPRPAEMLKSPEINHLEAELFAYPGKTFAKKPQNIELFAASNIYSEVEALA 320 Query: 391 DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 L + + +D+ V+ D+D Y I+ F D +P + +R SHP+ Sbjct: 321 AEFLLLARQ--GYRWKDMAVVCHDLDRYGSLIRRTF----RDYGIPCFMDRKRDIMSHPI 374 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI---RWGID 507 +E ++ L + + EDV L D+T + + L + E GI +W D Sbjct: 375 IELILAALEILSRGYRYEDVFTYLKTGF----SDLTVDEVEILENYALEYGIKGNKWKED 430 Query: 508 DDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567 L Q R+L +E + + + Sbjct: 431 FSYGDAESLIELNQ-------KRLLFTKPLEDLGVMLKGN--------------NTIREM 469 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 L + LE+W E + + + I+ + + Sbjct: 470 AQALFAFLERENIYSKLEKWTNDL------LARGFLEEASESSQLWNAMIEILKQMVEIM 523 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 V L + L I V + + +S K + ++G+NDG+ P Sbjct: 524 GEQKVNLKEFKRILEAGFLSLEIKIIPTTVDQVLLGDIQRSKSHDIKCLYVIGVNDGILP 583 Query: 687 RQLAPLGFDLMSQKPKRGDRSR---------RDDDRYLFLEALISAQQKLYISYIGRSIQ 737 G ++K ++ +++R+L AL +++Y SY Sbjct: 584 SLGREEGILSETEKEALQEKGLDLGYEREMIWEEERFLIYSALAKPAERIYFSYALADE- 642 Query: 738 DNSERFPSVLVQELIDY-----IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ 792 + PS+L+ +L + + L + HL D + Sbjct: 643 EGRALRPSLLIDQLRMIFPSLSLKTNLLEDRQWQLQMVATPESSFKHLVEKLRL-GLDGK 701 Query: 793 NYQPGERQSYAREWLPAASQAGKAHSEFVQPL-PFTLPETV---------------PLET 836 + Y W + +Q L PE + + Sbjct: 702 ELEDFWWDVY--RWYFEQESWQCSRKLLLQGLFHQNQPEPIEPQVSRRLFGTPLRSSVSR 759 Query: 837 LQRFWAHPVRAFFQMRLQVNFRTEDSE-IPDTEPFILEGLSRYQINQQLLNALVEQDDAE 895 L++F + P F + LQ R PD + L + + N E Sbjct: 760 LEQFVSCPFAHFVRYGLQPQERKNYELNSPDLGLLFHDSLLHFSHKLRENNRQWLDLSKE 819 Query: 896 RLFRRFR----------AAGDLPYGAFGEIFWETQ----CQEMQQLADRVIACRQPG--- 938 + G + + + L + + Sbjct: 820 ECYAIIDTVVDEIVPSFGRGIFNSHPRYQYLLNRLKRISRRAVWILTEHIQQGDFKPWDY 879 Query: 939 ----------QSMEIDLA-CNGVQITGWLPQVQ 960 ++EIDL + + G + +V Sbjct: 880 EVAFGRGGMLPAVEIDLENGEKLILEGRIDRVD 912 >UniRef50_Q03NA6 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Lactobacillus brevis ATCC 367 RepID=ADDB_LACBA Length = 1201 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 101/739 (13%), Positives = 205/739 (27%), Gaps = 109/739 (14%) Query: 306 LGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKR 365 L + + + +D + +D+ L+ A + + K Sbjct: 257 QSAKLYQQLYMVAQANRVPVLIDQQAKT--ARVSADLQALDTYWQASQTLSPQPSAVEKP 314 Query: 366 PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV 425 I + EV + ++ ++ RD +V+ +D+Y I + Sbjct: 315 TH------IQIVQAANRYVEVSRVATQIRQLVATG-NYRYRDFLVLTRHLDAYQTVIDPI 367 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 F + +PY HP +E +L + + DV +L +L R Sbjct: 368 F----QAQAVPYFDDADIRMADHPFVELLNALFDVQRRNYRYADVFRVLKSELLLPRDAD 423 Query: 486 TE--------EGLRYLRQWVNESGIR----------WGIDDDNVRELELPATGQHTWRFG 527 E + L +V ++G+ W + V + + T Sbjct: 424 GELMAVPAYRQALALTENFVLKNGLEGQHWWTQDKDWVYNRFAVGDGGVQTTRDDQISAQ 483 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 + R+ + + + + L + L W Sbjct: 484 INRI-----RRFVKQTLPPFFARLKVAATYTDAAAVLYQFVA-------NAGVSERLMTW 531 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 A D + I+ E L + L Sbjct: 532 RD------QAIAAGDLTKAGQPEQTWAAFCDILDEFHTILGDLPTVLPDFQALLQAGFAG 585 Query: 648 ERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR 706 + SQ V I +++ K+ ++G P P L++ ++ Sbjct: 586 AKFSQIPSTLDQVVISESGIVQANNRKITFIMGATADTMPDNQIPT--TLLADNDRQDLS 643 Query: 707 SRRDD-----------------DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 +R + YL A +S ++L SY S S S V Sbjct: 644 ARLQQVDDGTYLRDDAATQLAGEPYLNYLAFMSGSERLIFSYPAMSDDARSGLQLSPYVA 703 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARV--KAHLTCLHTRMPFDPQNYQP---GERQSYAR 804 + DY G S + + DE+ T H + Y Sbjct: 704 RIKDYFGLSIDIAAANPVAEDEAILPFVGTRRTTLRHLVQASHDSQLREVPLSRSWLYVL 763 Query: 805 EWLPAASQAGKAHSEFVQPL-----PFTLPETV-----------PLETLQRFWAHPVRAF 848 L G+ ++ + L P L + + L+ ++A+P F Sbjct: 764 NLLRTDPTYGELTTKLLGSLSYRNVPTQLTPDIVTQLYGTKINTSISKLEEYYANPYAYF 823 Query: 849 FQMRLQVNFRTEDSEIPDT--EPF--ILEGLSR----YQINQQLLNALVEQDDAERLFRR 900 + L + R + P + E F L+GL + ++N L+ ++ + + + Sbjct: 824 LKYGLNLQERDVFALSPASTGEFFHATLDGLMKLVNDQKLNLAALDDQQLREMTDEVMAK 883 Query: 901 FRAAGDLP----------YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGV 950 + P G + +T Q + L ++ + + E+ Sbjct: 884 LLDTTENPQFAILESSHRMGYIRQQLMKTMRQMAKTLQEQSKRTKLRPKRTEVQFGLGDE 943 Query: 951 Q-ITGWLPQVQPDGLLRWR 968 + + V + R Sbjct: 944 RGLAALSFDVGKRRQVTVR 962 >UniRef50_A8SJB4 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SJB4_9FIRM Length = 1152 Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 99/674 (14%), Positives = 235/674 (34%), Gaps = 92/674 (13%) Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 + +E+ S + + +I + EV + + + +++ DI Sbjct: 281 SEDLSFLEKNIGSFSPKVYFKDSENIRILKFKNIYDEVSFIAEEISKLVKI-KGYRYNDI 339 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 + + +D YS I+ VF + Y + ++ + +P++ +S+L + D + + Sbjct: 340 TLCMRSLDEYSYIIERVFDDY----NIDYFLDEKISIMENPIIILILSILDMKDKNYSYD 395 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGI---RWGIDDDNVRELELPATGQHTWR 525 V L + +++E + L +V +GI RW D+ +W Sbjct: 396 SVFRYLKSGLT----GVSDEDIFLLENYVIANGIKGNRW-FDE--------------SWN 436 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL------ASLLMQLNIWRRGLA 579 + + + + ++ +E ++ + +L + + + + Sbjct: 437 KSI------VHSVEEESDDEKLVKINEIKNIVISPIKNLHEKLKGRNTVKDICKYLYEFT 490 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 E L + + ++N + + + + A++ E + + + S + Sbjct: 491 LEIGLFDRINNL--VMNFQNEGNLYKAKEYSQVWGSFTAVLDEMVEFMGEEKIAYSKFIN 548 Query: 640 ELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 + L+ + + V I T+ M+ K+ +LG+NDG +P+ + DL+S Sbjct: 549 LIKTELENIELGIVPPSKDEVFITTVDRMKKPSTKIAFVLGVNDGNFPKNIVDN--DLIS 606 Query: 699 QKPKRGDRS-----------RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 + K ++ + D+++L + A++KLYI++ S + S Sbjct: 607 ENEKESLKTMGFNFSNNNLLKTTDEQFLSYKTFSIAKEKLYITFP-ISDLEGKSLLVSRF 665 Query: 748 VQEL-----------IDYIGQSHYLPGDEALNCDESEARVKAHL--TCLHTRMPFDPQNY 794 V+++ IDY+ + E + + + +++ + D N+ Sbjct: 666 VKKIKFIFENLEVESIDYLKDFSIMDIFETFSKERLYQILVSNIEALNSNKLSENDKFNF 725 Query: 795 Q-------PGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE-TVPLETLQRFWAHPVR 846 + + Y E L K F V + L+ F P Sbjct: 726 REIIDFLIEDKDYKYKIEILKDKLNYKKETENIKDYTSFLYESGNVSISKLENFMRCPFS 785 Query: 847 AFFQMRLQVNFRTEDSEIPDT------EPFI--LEGLSRYQINQQLLNALVEQDDAERLF 898 F L+ R P + F +G+ I+ +++ Q + E+L Sbjct: 786 YFINYGLRAKEREVYDFSPADYGTYCHKIFDDFFKGIFENNIDWNIIDREFIQREVEKLT 845 Query: 899 RRFRAAGDL-----P-YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQ- 951 ++ + P Y F I + + ++ +A++V E + ++ Sbjct: 846 KKMAEKSNFILESSPKYKYFSTITQKNIVESIEIMAEQVRRGNFVPTGFETEFGDESIKP 905 Query: 952 ITGWLPQVQPDGLL 965 IT L + L+ Sbjct: 906 ITYTLKNGKEIKLV 919 >UniRef50_C9LAG6 ATP-dependent nuclease subunit B n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LAG6_RUMHA Length = 1144 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 82/689 (11%), Positives = 190/689 (27%), Gaps = 103/689 (14%) Query: 336 HNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA 395 Q + A N+ + R + ++ + +P E+E+ + Sbjct: 278 GEYQGRFKDNPPMAFLEKNVFRYRRKKYPK----QQDAVQIYEAQNPASEMEMTAGEIRR 333 Query: 396 MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 ++ RD V+ D+ Y+P A A +P I ++ + +P +E Sbjct: 334 LVRT-KGYRYRDFAVITGDMQVYAPAAA----RAFARYEIPCFIDEKHSVFLNPFVEYLR 388 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 + + + F E + +L + DI+ E L +V GIR G Sbjct: 389 AAVDMIVENFSYESIFRMLRCGL----NDISTEEADRLENYVIAMGIR-GFSR------- 436 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL---- 571 W+ R G ++ + + A LV ++ Sbjct: 437 --------WQQEWVRSYRG----------ENPEECVQIDKIRASLVEKWEPFYKKMKTPD 478 Query: 572 ---NIWRRGLAQERPLEEWLPVCRDMLNAF-FLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 + L Q + ++ F + + I + ++ + + Sbjct: 479 ASVRTYTEALYQYITANKIQEKLKEFTRNFEAEGNLSLVKEYSQIYEIVMNLLDKLVEIL 538 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 V + ++ L L + ++ V + + R K+V +G+N+G P Sbjct: 539 GDKKVRIREFKEILEAGLSEAKVGIIPPTSDQVLVGDMERTRLKDIKIVFFVGVNEGKIP 598 Query: 687 RQLAPLGF--DLMSQKPK-----------RGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 ++ DL ++ K + ++ L ++ Sbjct: 599 KEQQAGKLLSDLNREELKGSLKERGLSLAPTAKENLYTQKFYLYLNLTKPSER-IYLSYS 657 Query: 734 RSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 R PS LV ++ + ES+ L+ + Sbjct: 658 RLSSSGEAMSPSFLVAQIQKLFPDAVREWDVPL--FAESKYGALDRLSEEMRKQDRTSPV 715 Query: 794 YQPG-ERQSYAREWLPAASQAGKAHS--EFVQPLPFTLPETV-------PLETLQRFWAH 843 ++ + +E+ ++ A + + + E + L++F Sbjct: 716 FEELMSWFTSQKEYGELVNRLIDAAYYVNPQESISKGVAEALYGTELSNSASRLEQFAKC 775 Query: 844 PVRAFFQMRLQVNFRTEDS-EIPDTEPFILEGLSRYQ------------INQQLLNALVE 890 F L + R + D + L + + + + L E Sbjct: 776 ACSHFLSYGLMLRERVRYEFSMADMGTLLHNSLDLFARKVREQGKSWVDLEDEERDTLAE 835 Query: 891 QDDAERLFR--RFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA-------------CR 935 E + + + + L ++ + Sbjct: 836 DCVTEVVEKSGETILLSSARNAYTINRVKRMVKRSVWALQKQLKQGEFYPALTEWAFGEK 895 Query: 936 QPGQSMEIDLACN-GVQITGWLPQVQPDG 963 S+ DL + + G + ++ Sbjct: 896 DNIDSLNFDLESGQKLHLKGRIDRIDVCQ 924 >UniRef50_C4V2E4 ATP-dependent deoxyribonuclease subunit B n=2 Tax=Selenomonas RepID=C4V2E4_9FIRM Length = 1198 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 129/830 (15%), Positives = 223/830 (26%), Gaps = 151/830 (18%) Query: 171 ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGL-PSRVFICGISALPPVYLQALQA 229 L +L R + +E L + P L + +++ G P L +A Sbjct: 163 ELATIMDELAARMEGRLTDHTDRMERLAAQLIDAPFLRGAELWVDGFDFFNPQELAVFRA 222 Query: 230 LGKHIE-IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 L + ++ +H+ T +D EN Sbjct: 223 LFRVVDTVHVSLT------------------------MDGRDDGTHVFTNLPENIYDTGL 258 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR 348 + L + ++ + S E+ + Sbjct: 259 FARSYQTMHLL-----------QQIFTEEQPSAEIGIRLMPVQ--------------HRA 293 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 G+ + E + D SI +P+ EVE +L L D R+I Sbjct: 294 RTEGLRLLEAQLFGHGHITPAKDDSIRIVEAANPRLEVETAAADILR-LARDNGYRYREI 352 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V+V D+D Y + F D +P+ + +R HP+ E ++ + + E Sbjct: 353 AVLVRDVDLYGDLLSLAFA----DCGIPFYLDVKRPSAHHPLAELLRAVAQMTWRGWAYE 408 Query: 469 DVLALLDVPVLAARFDITEEG-----------LRYLRQWVNESGIRWGIDDDNVRELELP 517 V L +E + L + GIR E Sbjct: 409 TVFRALRTGFFPLLGTEEDEDAPPLCADWQEAVDRLENYCLAYGIR----------SESQ 458 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP-YDESSGLIAELVGHLASLLMQ------ 570 T W F R+ + E D IAE + L L + Sbjct: 459 WTATEPWDFVQRRVTEHELHLDEEEERLREEQWLDHLRRRIAEPLSLLTGHLRRHESTAR 518 Query: 571 -----LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 L + L + L W AA I A+ + + Sbjct: 519 VRTKALYDFLDELCVPQTLRLWSETADR------EGRLADAAAHRQIWSSCMALFDQLVE 572 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGV 684 + D + + L+ LD I+ V + + + V ++G N G+ Sbjct: 573 VRGDDPLSSRDYEELLSDGLDAMSIALIPPGLDHVTVASFDQNSIAGARAVFVIGANAGI 632 Query: 685 YPRQLAPLGFDLMSQKPKRGDR-----------------SRRDDDRYLFLEALISAQQKL 727 PR G ++ G+ + +RY A+ L Sbjct: 633 MPRAGTTSGVFSDTELLFIGESLQTAGADSGHTVFGGRTQQSFLERYQLYRGFTEARDYL 692 Query: 728 YISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD--------ESEARVKAH 779 ++SY S+ D S PS L+ L +P A D + + + A Sbjct: 693 WVSYALSSV-DGSTLAPSPLIARLRRISSSFFSIPLALAGRDDPLLLSAPYPAFSHLTAA 751 Query: 780 LTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV------- 832 L R P + H F+ P ++P V Sbjct: 752 LREKKERGEMPAMWGDVYNWMLQDAVMQPLLRRM--LHGLFLPPREVSIPAPVAARLFTR 809 Query: 833 ------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN 886 L+ F P R F L++ R + + +L Sbjct: 810 DRRLSGSTTRLETFRQCPFRHFAMYGLRLQQRDRYEFQSN---------DFGTLLHGILR 860 Query: 887 ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ 936 E + A + P E E + + Q+ V+ R Sbjct: 861 GYGEWVRSAYGNDWCAALAEAP-----EKIEELLQELIPQVHSTVLMSRA 905 >UniRef50_B1YKM7 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Exiguobacterium RepID=ADDB_EXIS2 Length = 1143 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 111/726 (15%), Positives = 222/726 (30%), Gaps = 97/726 (13%) Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 +G R Y+ L+ ++ Q DI + + ++ Sbjct: 239 FGVSQRCYMQLIEQMKERQIAH---------------EDIYYGQTVKFQSTGLRMLEQAL 283 Query: 363 NKRPLDPLDSSIT---FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 P D +T + Q E E + + ++ +DI +V ++ Y+ Sbjct: 284 LSPGYPPTDEEVTGVTVSAAVNRQVETEAAVRKAIQLV-RHDGYRFKDIAFLVRHLEPYA 342 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 ++ F +PY + R + HP++E ++L + + + E V LL ++ Sbjct: 343 DHLERAFQLYD----IPYFLDQRESMVHHPIVELVHAVLEIVMTGYREESVFRLLKTELI 398 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + L L +V E GI+ G +L+ + + E Sbjct: 399 PLPAEDPRLALDRLETFVLERGIK-GSMWKKPWQLKRRLADEISLTDAEL-QEELELNEW 456 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 Q +++ P ++ + ++ L + L W A Sbjct: 457 RQFLVEAIEPLEK----RFKASKTMSEYTRALYRFLEEHHMTDRLTVWKQ------QALE 506 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GP 658 + + + + + + A + L + L+ R S + Sbjct: 507 VNELSQAREHDQVYEAVLLLFEQLEAAAPEATLTTELFVQMVETGLESLRFSLVPPSLDQ 566 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYP------RQLAPLGFDLMSQKPKR---GDRSRR 709 V + R KVV LLG NDG+ P + L+ D + + Sbjct: 567 VIATDYVRGRLQQVKVVFLLGANDGLIPLVEDQSKLLSEGDHDFLHDQGIPVGKASLDVF 626 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID----------YIGQSH 759 DD+ Y + + + + L+ISY D P+ +V+++ Y ++ Sbjct: 627 DDELYYLYQGVTAPSESLHISYALVDE-DGKALQPASIVKQIKHQLLQDRPVKTYFAEAG 685 Query: 760 YLPGDEALNCDESEARVKAH----LTCLHTRMPFDPQNYQPGERQSYA--REWLPAASQA 813 D+ L S R A L L R P P + R A Sbjct: 686 DHAPDDQLQFVTSPERAAAAAAIELRRLQRRYPIQPSWFDVYNRLLENGRGRERMALFSN 745 Query: 814 GKAHSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIP 865 + +PLP L + + + + A + F + L++ R E P Sbjct: 746 ALFYQNQAEPLPEDLARNLYGDTIKASVSRFETYNACSYKHFARYGLRLKERKLYKFEAP 805 Query: 866 DTEPFILEGLSRYQIN-------QQLLNA----LVEQDDAERLFRRFRAAGDLPYGAFGE 914 D L+ +N + L+ + ++ E++ + A + FG Sbjct: 806 DIGNLFHGALNDLSMNIKASGKRWRELDDQSCSNLAKEAVEKVTPEIQNAILMSSNRFGY 865 Query: 915 I---FWETQCQEMQQLADRVIACRQPG------------QSMEIDLACN-GVQITGWLPQ 958 I + Q + L + + L ++ TG + + Sbjct: 866 IKKKLTDVVEQTAKMLVKQAERSEFEPDLFEISFGNAMFPPLRFTLPDGTEIEFTGRIDR 925 Query: 959 VQPDGL 964 V + Sbjct: 926 VDQATI 931 >UniRef50_C8PVF1 Putative exoribodeoxynuclease V, gamma subunit n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PVF1_9GAMM Length = 1524 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 133/686 (19%), Positives = 257/686 (37%), Gaps = 85/686 (12%) Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE----------- 398 + + ++ + RP PLD+SI HVCHS R++EVL ++ L Sbjct: 496 LKQESNKQLENVEKWRP-KPLDTSIAIHVCHSMVRQLEVLRSMIIGWLNYSDMQATPAQI 554 Query: 399 -EDP--TLTPRDIIVMVADIDSYSPFIQAVFGSA--PADRYLPYAISDRRARQSHPVLEA 453 DP DI+V++ DI+++ I+A F LP ++ A+ + + +A Sbjct: 555 PTDPWDRRALSDILVLLPDIETHQNIIEATFPKHVGGDGYQLPAKVTGVVAKDINLLWQA 614 Query: 454 FIS---LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 LL+ +RF +V L + L F + E + + ++G G D+ + Sbjct: 615 ITGYYTLLNRAGARFQRSEVFDWLMLAPLYESFGLNLEQMTRACDLLTQAGFIRGFDELH 674 Query: 511 VRELELPATG--QHTWRFGLTRMLLGYAMESAQ-----------GEWQSVLPYDESSGLI 557 +++ A ++T+ + L R++ G M A G + +P + Sbjct: 675 LQQTLSAADDDYRYTFAYALERLVAGVMMPKATVVSFGEYTNSFGVVEKFVPLTNLTMAD 734 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA------AMTL 611 A++V L + L+ R + L +WL ++ F +T A A Sbjct: 735 ADIVAVLCDIYETLDDNRHLGNDVKTLPDWLTQIEKLIQQKFSLFNQTNAWRAIFAAQND 794 Query: 612 IEQQWQAIIAEGLGAQ-------------------YGDAVPLSLLRDELAQRLDQERISQ 652 +++ +A + + L+ + + +AQ + +++S Sbjct: 795 LKENIEANSKYLATVKIKTAKNPNPATEPVQQIDTENLPLKLTFVLENIAQSIINQQVSA 854 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM-SQKPKRGDRSRRDD 711 +G + + +RS+P+K+V +L +N +P+Q ++LM + P RGDR R DD Sbjct: 855 EP-SGVITFARIGSVRSLPYKLVVMLNLNLSEFPKQEQQNRYNLMQAGLPIRGDRFREDD 913 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP--------- 762 D FL+AL+ A+Q +I Y G+S D E P+ VQEL+D++ Sbjct: 914 DLGAFLDALLCAKQACWIFYNGKSTTDTHEHLPASPVQELLDFLQNRMASDDVIIDPNND 973 Query: 763 ---------GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQA 813 E VKA+L H +PFD ++ + + + Sbjct: 974 QNSLSNNSQNPPNPQSTNFEQWVKAYLVTHHAALPFDKSYFELPQTEHKDKGIQSPEQIN 1033 Query: 814 GKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE 873 S +Q +L + + L P + + + + + S P + + + Sbjct: 1034 DDRVSADLQQTTASLNQQIKLSK--TALYPPAKIWHNLYTALQDKEATSTQPIVQVWDTK 1091 Query: 874 GLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA 933 L+ + Q L + + + + G + + +A + Sbjct: 1092 QLTEWLSQWQQLKQRLSDMPEQSQQHYVNLSKIV--GNLADPAKAFVKAQNIAIAAQGDN 1149 Query: 934 CRQPGQSMEIDLACNGVQ---ITGWL 956 + D + + GWL Sbjct: 1150 DSGGNDRNDNDNEFESLTLDALDGWL 1175 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 92/457 (20%), Positives = 164/457 (35%), Gaps = 128/457 (28%) Query: 1 MLRVYHSNRLDVLEALMEFIVERER-LDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML + SN++D L + + FEP ++V S M +WL+ ++ K GI+ Sbjct: 1 MLTIIQSNKVDKLFDHLLNAYKNPSYQGSIFEPFQVIVPSKVMGEWLKKQVADKAGISTL 60 Query: 60 IDFPLPASFIWDMFVRVLP------------EIPKESAFNKQSMSWKLMTLL-------- 99 + + + RVL ++P+ + +K M W++ L Sbjct: 61 VTTEFWGRYFLGLMQRVLRTYARISEDDDILDVPEVAMLSKNVMQWQIFGYLTQYRQAIV 120 Query: 100 --------------------------------PQLLEREDFTLLRHYLTDD--------- 118 P +++ + + L++D Sbjct: 121 EQPQHPLYPFLSPLVEDKEADSPNTTGFAPDTPAIVDSLSWANNQSLLSNDVISQSADLQ 180 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL------------------------ 154 + ++++QL+S A++ ++Y+ YRP WL+ W Sbjct: 181 TQDQRIWQLASDMANMLNRYMTYRPQWLSNWGQDKPVAVSDMIAKKDALHNRLNGRDASN 240 Query: 155 --------VEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESAT----- 201 VE + +A Q LW+ L + R L+ +F + L + Sbjct: 241 AIDTPDWLVEHYEQLEAAQRFLWRQLFDD------DYRFREQLHNQFWQALNHSDTRIRN 294 Query: 202 TCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLL 261 LP VF+ + LPP L LQ LG ++ +L NP +W DI D +L ++ Sbjct: 295 ISRSKLPKHVFLFTLQQLPPTELLDLQRLGVLTDVTILHFNPSEQFWADIVDKNWLMQMQ 354 Query: 262 TRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ 321 E+ ++ +D G+ LL+ +GK R+ +L+ L ++ Sbjct: 355 M------------------EDDASKHDAWYLKDYGHTLLSRFGKQSREVFAMLASLSGNE 396 Query: 322 ELDA-----FVDVTPDNLLHNIQSDILELENRAVAGV 353 F + P+ LL IQ DIL LE A Sbjct: 397 YEHVLWQDDFDNTPPNTLLEFIQHDILMLEEVATTAK 433 Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 53/168 (31%), Gaps = 17/168 (10%) Query: 964 LLRWRPSLLSVAQGMQLWLEHLVYC---------ASGGNGESRLFLRKDGEWRFPPLAAE 1014 L + P+ +Q WL HL + A +G S P + E Sbjct: 1356 WLNYLPTSGKEKYLLQFWLHHLCWQVLRRTTAQQAQLNDGFSLWQFSNKKTVYLPAIPCE 1415 Query: 1015 QALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQA 1074 QA YL ++ Y+ S ++ P A+ + Q ++ + +L+ Sbjct: 1416 QACGYLQDIVMVYQLIDSVVTILPP----AFCLSFLQKQ---QKQPEAPASQHLGDWLKD 1468 Query: 1075 YEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRF-LLPLFRFNQ 1121 N + + D +Q L P + + P+ + Sbjct: 1469 SNFNFVDVNQFDYPIWQHLIGDYKPSVVIGFAQTLGALIYEPMLSMVK 1516 >UniRef50_A5ZAT7 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZAT7_9FIRM Length = 1144 Score = 239 bits (609), Expect = 7e-61, Method: Composition-based stats. Identities = 104/810 (12%), Positives = 243/810 (30%), Gaps = 128/810 (15%) Query: 212 FICGISALPPVYLQALQALGKHIE-IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFE 270 +I G + P+ Q L+ L KH + + T P + Sbjct: 200 YIDGFTGFTPIQYQVLELLIKHCAGVKIAITLPEDEF----------------------- 236 Query: 271 DRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVT 330 + N+ + ++ N L +D ++ L D+ + + + Sbjct: 237 ------QSLRNAYSKGNNAISKYELFN--------LSKDTLWKLKDIINRNNI----EQQ 278 Query: 331 PDNLLHNIQS--DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEV 388 ++ Q+ I + + N+ + S + + H +P+ E Sbjct: 279 ETVIVGEGQAPYRIRDNKELTFLEKNLFRNNSSKYRENCKA----LEVHSMSNPREEAAY 334 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 + R+ ++ D DI V+ D+D Y +I+ F +P I + S+ Sbjct: 335 VAGRISELIV-DKGYRYNDIAVITGDMDGYYRYIEEEFSKN----NIPAFIDHKHNIASN 389 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 P ++ + + + + F E V L+ + L I E + + +V +SG R G Sbjct: 390 PFVDGIKAAIEIVEKDFSYETVFHLIRLGFLP----IDREAVDIMENYVLQSG-RRGFKS 444 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 W G E Q+ E + E + + + Sbjct: 445 YGRL-----------WEKAYK----GMTAEELDMVNQAREKLVEIIRPLREELKKKKATV 489 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 + Q ++ + R + + + ++ + Sbjct: 490 REYTKAVYQFVQANNMQRQIDDYR--IEFQNQGEISRAKEYEQVYVTIITLLDRIVELMG 547 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIP-FKVVCLLGMNDGVYP 686 + + + + L + ++ V + + R +++ +G+NDG+ P Sbjct: 548 DEVLTIKEYKQILQAGFESVKVGIIPPGLDTVMVGDIERTRLKDTKRIIFFMGVNDGIIP 607 Query: 687 RQLAPLGFDLMSQKP---------KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ 737 + G + + ++ +K+ I++ +S Sbjct: 608 KAGQAGGIITDTDREFLEKNNYILAPTATDNVFKQKFYLYTIFAKPTEKMCITFS-KSGS 666 Query: 738 DNSERFPSVLVQELIDYIGQSHYLPGDEA---LNCDESEARVKAHL---TCLHTRMPFDP 791 D + R S ++ L++ + DE+ LN + ++ +L +++ Sbjct: 667 DGATRRKSYIISTLMNLFENLKIIDEDESEITLNQVTTRSKALDYLSQNIYEYSKEGDSG 726 Query: 792 QNYQPGERQSYAREWLPA-ASQAGKAHSEFVQPLPFTL--------PETVPLETLQRFWA 842 + +E+ A P+ E + + L+RF A Sbjct: 727 IFKELMATVMKNKEYSKVINLMFDGAFYSAKNPILDENVARQLYGNKENIGITRLERFAA 786 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL------------LNA--- 887 F L++ R + F + L I + L+ Sbjct: 787 CAYSQFLNNGLKLGERKKFELAA----FDIGNLYHSAIKEFFDTINTNNIKWADLDDKKS 842 Query: 888 -LVEQDDAERLFRRFR--AAGDLPYGAF-GEIFWETQCQEMQQLADRVIACRQPGQSMEI 943 + D E++ ++ A D+ AF + +T + + L + + + E+ Sbjct: 843 ENIINDSIEKVMEQYENDALNDIARSAFIKKQVKDTSTETVNALVKHIRSGNFLPREYEL 902 Query: 944 DLACNGVQITGWLPQVQPDGLLRWRPSLLS 973 +A V + + + + Sbjct: 903 RIAHGRV---DRVDTFEDGNNIYVKVIDYK 929 >UniRef50_C0WLM6 ATP-dependent deoxyribonuclease, subunit B n=3 Tax=Lactobacillus RepID=C0WLM6_LACBU Length = 1181 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 87/609 (14%), Positives = 180/609 (29%), Gaps = 79/609 (12%) Query: 337 NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 I +D+L+LE + + + SI + + E++ + R+ M Sbjct: 283 RISADLLKLEKFWIQSSGLGAIDDNPITVS-----KSIQVYQADNQYSELDQMATRIRQM 337 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + D +++ +DSY + +F + +PY +++ HP++E + Sbjct: 338 VSTGK-YRYSDFLILTRHLDSYETILDPIF----TMQQIPYFRDIQKSMVDHPLVELLEA 392 Query: 457 LLSLPD----SRFVSEDVLALLDVPVLAAR------FDITE--EGLRYLRQWVNESGI-- 502 L + D + +DV+ L ++ + I + + + V ++G Sbjct: 393 LFDMYDPDRPRNYRYDDVMRFLKSELVLPQATDGTAMKIDDYRQAVSLTENLVLKNGFEG 452 Query: 503 -RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 +W DDD R+ + + ++ LP + A+ Sbjct: 453 KKWTQDDDWQYVWVADDDDGTVLTEKDKRIT--QQINVIRHLIKNALPNFYNRFYKAKTN 510 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 A + L + L++W D D + + + + +++ Sbjct: 511 ADAAGI---LYRFLVENGVVNRLQDWRNAAVD------RQDINRSDEIEQVWRTFCSLLD 561 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGM 680 E + + + SQ V I ++ KV ++G Sbjct: 562 ENVRILGDKPFVAQDFWALIYAGFEGATYSQIPSTLDQVQISESGMVQMNNRKVTMMIGS 621 Query: 681 NDGVYPRQLAPLGF----------DLMSQKPKRGDRSRRD--DDRYLFLEALISAQQKLY 728 ND P ++ D +S D + + YL A S +L Sbjct: 622 NDETMPERIVNKSLFGDDDVLQIQDNLSDSQYLNDPADEQMAAEPYLNYLAFTSPSSRLI 681 Query: 729 ISYIGRSIQDNSERFPSVLVQELIDYIG-QSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 SY + D S S V + + + + T H Sbjct: 682 FSYTNH-VNDESGINLSPYVSRIAAHFNLKVVNYAAVPDNQRAVNVYIGSKRATLHHLIQ 740 Query: 788 PFDPQNYQPGERQSYAREWLPAASQAGKAHS------------EFVQPLPFTLPE----- 830 G+ Q A PL + E Sbjct: 741 VIQDTYKNKGQLNDTWAFIFNQLKQDPDAAPLTNQLLGSIDYKNVPVPLSREIAEKLYGS 800 Query: 831 --TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 + + L+ F+ +P F + L++ R E F L S Q + L+ + Sbjct: 801 ALNISISQLESFYENPYEYFLKYGLRLQER---------EQFELSPASTGQFFHEALDRI 851 Query: 889 VEQDDAERL 897 + +++ Sbjct: 852 ISMVHEQKI 860 >UniRef50_Q4L4Y2 ATP-dependent helicase/deoxyribonuclease subunit B n=65 Tax=Staphylococcus RepID=ADDB_STAHJ Length = 1162 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 86/618 (13%), Positives = 200/618 (32%), Gaps = 77/618 (12%) Query: 313 LLSDLESSQELDAFVDVTP---------DNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 LL+ + F + +L +Q + + R ++ + + + Sbjct: 229 LLTTDGNEDPFSLFRKPSEVLTHLKEIAKDLNIELQQQFFKQQYR-FNNKDLIQLEQQFD 287 Query: 364 KRPLDP--LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 ++P D SI S + EV + +++ D +DI ++ D ++Y+ Sbjct: 288 ALQINPIAYDGSINILESSSIREEVNEVARQIIKD-TRDKQYRYQDIAILYRD-EAYAYL 345 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 +V +P+ I +R+ HP++E SLL + + + ++ L+ +L Sbjct: 346 FDSVLPQYD----IPFNIDTKRSMTHHPIMEMVRSLLEVIQTNWNISPMMRLIKTNILTN 401 Query: 482 RFDITEEGLRYLRQWVNESGI---RWGIDDD--NVRELELPATGQHTWRFGLTRMLLGYA 536 F + + L +V E G+ RW +D+ ++ +H R Sbjct: 402 HFKDSAYLIDLLENFVVERGVYGKRW-LDEKLFSIDNFTKMGRKEHKLTTE-EREDFEQV 459 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 + +L ++++ + G + + + + L Sbjct: 460 VHLKNDIIDKILTFEKAMNEAENVRGFATAFYETMEAF----DLPKYLMTHRDQLD---- 511 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 E + I I+ + + + + L + L+Q Sbjct: 512 --VDGRHEEAEEIDQIWNGLIQILDDLVTVFDNEEMTLKRFLEVFDIGLEQLEFVMIPQT 569 Query: 657 -GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD----- 710 V+I T+ + K + ++GMNDG P+ ++ L++ + K+ + Sbjct: 570 LDQVSIGTMDLAKVDNKKHIYMVGMNDGAMPQPVSSSS--LITDEEKKVFEQQAQVELSP 627 Query: 711 -------DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG-----QS 758 D+ ++ A+ +++ SY Q ++ S + ++ Sbjct: 628 TSDILQMDEAFVCYIAMTRGSEQVTFSYSLMGAQ-GEDKEKSPFIDQIQGLFNGLEVMNI 686 Query: 759 HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR------------EW 806 HY + L+ E + K + + + + E+ Sbjct: 687 HYQHNAQPLSLMEHPHQTK--VVLFESLKAWLEAEMVADVWVDAYQVMRDNDKLNNGLEY 744 Query: 807 LPAASQAGKAHSEFVQPLPFTL---PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE 863 L A + +PL +L + + + P + + L++N RT+ Sbjct: 745 LLTALTYDNETVKLDEPLAASLYGSTINASVSRFEGYNDCPFKHYANHGLRLNERTKYKL 804 Query: 864 IPDTEPFILEGLSRYQIN 881 E F L + + Sbjct: 805 ----ENFDLGNIFHTALK 818 >UniRef50_C4FTG6 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FTG6_9FIRM Length = 1178 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 152/1040 (14%), Positives = 294/1040 (28%), Gaps = 189/1040 (18%) Query: 12 VLEALMEFIVERERLDDPFEPEMILVQST---GMAQWLQMTLSQKFGI--AANIDFP--L 64 VL + I +E F LV M +L + K+G AA +D Sbjct: 16 VLLDHLLDIQAKEPEAQFF----YLVPEHLKFDMESYLLAAVQDKYGSNEAALVDIQVVS 71 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 W + L E S+ + + + LL + ++ L + K Sbjct: 72 FKRLAWFLMPNSLAEEKPISSIGQIML---IKRLLARYQDQ---------LQVFRGQVKH 119 Query: 125 FQLSSKAADLFDQ-YLVY-RPDWLAQW--ETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + K A LFD+ YL +P+ L+Q + L E A L++ ++ Sbjct: 120 QGFAEKLAQLFDELYLGQIQPENLSQVPDLNQQEAKRLAEL----ALLYQGFIQEIEGQV 175 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 +H +++ P P+ + + LQ L L + Sbjct: 176 LGHYHDLQRLDSYLKA------HPLNRPTYLVVDHHYFFNGQQLQLLTTLIQQ------- 222 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 C+ W S+ A + D +V Sbjct: 223 ---CQAVW--------------------------ITLPLSQQAARSKAYDPLIEVA---- 249 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 R + L S L D T + + Q++IL L + + Sbjct: 250 -------RHTYGQMQLLAQSLHLPVAEDWTINQVQEGYQANILTLAQAFENHLRLAPQEL 302 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 S + + Q EV +++ ++ + RDI+V+ D+D Y P Sbjct: 303 SQPLNQVKTH----VIWEHDAIQTEVRHTSNKIHQLVSQ-EGYRYRDILVLTRDMDRYRP 357 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV-- 478 + A+F +PY HP++ S L L R+ D+ +L + Sbjct: 358 LVTALFEQND----IPYFYDHAVIMGQHPLVLWLESGLKLYRYRYQLADIFGILKSGLWL 413 Query: 479 ---LAARFDITEEG-----------LRYLRQWVNESG----------IRWGIDDDNVREL 514 L A + + L V +G W D + + Sbjct: 414 PADLRAAMAENPQDGPVLEEEFKAQVDLLENVVLANGYVGYRFAQLSFEWRFDQADRPYV 473 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 +G L + + +Q + SG A L W Sbjct: 474 NAAGQVTGQ-TYGQVVQALRESFLADFAPYQDLAQLTSFSGQKAAEW---------LYQW 523 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 + + L + D + Q A + E + Sbjct: 524 LEEVGVKDRLIARRDQAIE------KGDLALSRQYEQVWQTLTASLDEFYQLYGEAELTF 577 Query: 635 SLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 S ++ L L++ A V + ++ + +KV +LG ++ P+ Sbjct: 578 SEFQELLLTGLNEATFHIIPPALDQVMVTSMESPQVQAYKVCFVLGADELTLPKHHQEDS 637 Query: 694 FDLMSQKPKRGD--------RSRRDDDRYLFL----EALISAQQKLYISYIGRSIQDNSE 741 ++ + G+ R + L L + L+SA +LY+SY+ Q + Sbjct: 638 LLSVANRQSLGESLLPYQQLRQSSQHNYSLELLMTQQVLLSASDRLYLSYVAMKGQQTVK 697 Query: 742 RFPSVLVQELIDYIG---QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE 798 S +Q+L +++ S + + + + Q + Sbjct: 698 L--SPYLQQLAKQFHLPIKTYTHTLIHQNQVKLSRLEFGRYPVQMSSLLQLVHHYSQQKD 755 Query: 799 RQSYAREWLPAASQAGKAHSEFVQP-------LPFTLPETV-----------PLETLQRF 840 R S A + H+ + LP L + L+++ Sbjct: 756 RPSAAFLDFLTLMASQNPHTWVLLAQLFQFNQLPQNLTPETALALFGQKMTASVSKLEQY 815 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPD-TEPFILEGLSRYQINQQLLNALVEQ-DDAERLF 898 + P F L++ R + + + L ++ Q+ + L Sbjct: 816 YQDPYSHFLLYGLKIRPRQQLELNAAGAGDYYHDFLDKFTQAQEARPDFETNFASIQTLM 875 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEID-------------- 944 + Q ++Q + +A Q + Sbjct: 876 AEDLRFNIFGTNPRMHLIKRKLDQHLRQFLNVSLAQSQALTVQPVATELVFGSKQEAGLI 935 Query: 945 --LACNGVQITGWLPQVQPD 962 L + + G + ++ D Sbjct: 936 LPLDKGSLTLRGKIDRIDAD 955 >UniRef50_Q836J9 ATP-dependent helicase/deoxyribonuclease subunit B n=37 Tax=Enterococcus RepID=ADDB_ENTFA Length = 1196 Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats. Identities = 89/626 (14%), Positives = 197/626 (31%), Gaps = 85/626 (13%) Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 + L L +++ D + ++L + N + G+N ++ PL Sbjct: 262 TYHQLYQLARQKQIPILSDYVE-------KKEVL-ITNPDLQGLNDYWIQSQEHLPPLST 313 Query: 370 LD---SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 D + + + E+ + + ++ E ++I V+ D+D Y ++ +F Sbjct: 314 ADWRGDGLFLWRAENVKEELTHVATEIRRLVVE-EGYRYKEIQVLTRDLDCYENLLEPIF 372 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 + +P + A HP++E SL ++ + DVL L + + Sbjct: 373 A----EHEIPVYVDRDMAMDRHPLVEWIESLFAIHSYNYRYRDVLRFLRTELFMPMNQLA 428 Query: 487 EEGLRYLRQWVNESG-IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 L W+N+ R +D + + W + Y E+ + + Sbjct: 429 TSE-ESLTDWLNQRNAWRRKVDITE-NVVLAYGYEGYYWSQEKDWEFIRYDFEAEEQ--E 484 Query: 546 SVLPYDESSGLIAELVGHL--------------ASLLMQLNIWRRGLAQERPLEEWLPVC 591 V +E S I + + L + L+ W Sbjct: 485 DVATMEEESNAIRQSLQRLLPSYFQAMISAKTGLEAATVFYHFLLQSGVATQLKMWR--- 541 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 L A ET +++ E + + + ++ L+ S Sbjct: 542 ---LQAIEAGQLETARNHEQTWDALMSLLDEYVTVYGESSFDFTTFQEIFVSGLEGLHYS 598 Query: 652 QRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR---- 706 + A V + + R KV +GM + ++P+++ ++ D Sbjct: 599 KVPTAIDQVQVRAMDLTRPGAAKVTFAIGMTEEIFPQKIENKTLLSDEERQTINDTLTEN 658 Query: 707 --------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 + + Y+ SA+++LY++Y E PS + + + Sbjct: 659 QYLRGTTGRKIAQEPYVAYLVFSSARERLYLTYPSVKDTA-QEVKPSPYFKNIQKDLNLP 717 Query: 759 HYLPGDEALNCDESEARV----------------KAHLTCLHTRMPFDPQNYQPGERQSY 802 + + + DE+ + + +PF + E+ Sbjct: 718 VFEKNETTIFDDETTSLAHISTYRTLIGELTRLKRQRKETQEGLLPF----WLNMEKALM 773 Query: 803 AREWLPAASQAGKA--HSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRL 853 + P A Q ++ H + + L E + + ++ F+ + F + L Sbjct: 774 NQSIAPLAKQVFESLTHQNIPEKIDEVLAEPLYGKDIYTSVSRMESFYRCQYQYFSRYGL 833 Query: 854 QVNFRTEDSEIP-DTEPFILEGLSRY 878 ++ R P T F E L ++ Sbjct: 834 RLKERDVFGLSPAATGEFFHEALDQF 859 >UniRef50_A7VXI0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXI0_9CLOT Length = 1125 Score = 232 bits (591), Expect = 8e-59, Method: Composition-based stats. Identities = 100/695 (14%), Positives = 203/695 (29%), Gaps = 104/695 (14%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 + +E+ + + I + E + + R+ L ++ Sbjct: 273 RFQNEELKLLEQVIYRQERLESGEVPGHIVLYNASDIYEEADFVARRI-QKLVQEEGYRY 331 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 R+I V+ + +SY + V +A +PY + + P++ +S L S + Sbjct: 332 REITVIARETESY----RGVLDAALESYGIPYFMDQPEPLEEKPLMTLVLSALECVQSGY 387 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVN---ESGIRWGIDDDNVRELELPATGQH 522 S+++ LL + ++ E + L + SG RW P + Sbjct: 388 RSDELFRLLKTGLT----ELQTEEIAALENYALLWNLSGRRWLEPFTMHPRGFSPEMTEE 443 Query: 523 TWR--FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 + GL R+ + P + + G + + L Sbjct: 444 DQKKLEGLNRLRETV-----------MEPLAQFEESLRSGTGK--GIAYGVYQLLERLNA 490 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 + + +M + + I+ + + + Sbjct: 491 AQNIRRMADELENM------GEWNLAQEQIRLWDMLMEILDQMALVLKEQHLSPRRWSEL 544 Query: 641 LAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 + E I+ V++ R + V L+G +G +PR G ++ Sbjct: 545 FQLVVQSEEIAFIPQGVDEVSVGGADRSRPAAPRAVFLIGAEEGEFPRTPVSAGVFSDAE 604 Query: 700 KPK-------RGDRSRRD--DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 + D + ++RYL A +S ++L++SY S R PS LV+E Sbjct: 605 RRLMISMGLPLYDSLEKLAVEERYLAYMAAVSPSERLFVSY-ASSDLSGGARSPSSLVRE 663 Query: 751 LIDYIGQSHYLP-GDEALNCDESEARVKAHLTCLHTRMPFDP-----QNYQPGERQSYAR 804 + + EA + L R P + + + G Y Sbjct: 664 VRKIFPECPVADRSQEAFSDLLWSPEPAFELAASLWREPSEREETLKRYF--GGLPEYQD 721 Query: 805 EWLPAASQAGKAHSEFVQPLPFTL----PETVPLETLQRFWAHPVRAFFQMRLQVNFRTE 860 A + F P V +++++ + F + L R Sbjct: 722 RLEAVGRAASEEPIAFQNPENAQKLFGSNLRVSASQIEKYYLCRFQYFCRYGLGAKERK- 780 Query: 861 DSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQ 920 P + + L + LL ++ E L + + Sbjct: 781 --------PAVFDALEYGSVMHYLLENMLRAFSGETLASMKK---------------QEL 817 Query: 921 CQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL 980 E+++L D + + GW + R+R L +A Q+ Sbjct: 818 LAEIRRLLDSYV----------------ETNLGGW-----EEKSPRFRYLLARLADTAQM 856 Query: 981 WLEHL---VYCASGGNGESRLFLRKDGEWRFPPLA 1012 L HL + + + L + K E L Sbjct: 857 LLSHLGKELAQSDFVPADFELSIGKGKELEPLVLE 891 >UniRef50_C9LQY6 Putative ATP-dependent nuclease subunit B n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQY6_9FIRM Length = 1028 Score = 228 bits (582), Expect = 8e-58, Method: Composition-based stats. Identities = 106/691 (15%), Positives = 211/691 (30%), Gaps = 105/691 (15%) Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 L A K + I E + + R+L+++ D L Sbjct: 166 LRCLAADYFQNVPSPCPLPKETSPVPEKGIHIVSAPDSHAEADFISRRILSLV-RDKNLR 224 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP--- 461 RDI+V++ D+Y+ ++ F +P +++ +HP++ LL Sbjct: 225 WRDILVLLRSADTYTDPLERSFSRYG----IPVFTDEKQPMNNHPLVMLLDGLLHFIKAE 280 Query: 462 ----DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 + F E + +L + + + L +V + IR+ Sbjct: 281 SRGKNRGFTREHIFRILKTEIFP---SFPTDMIDKLENYVLKYHIRFS------------ 325 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS-LLMQLNIWRR 576 TW+ +A + Q P + +L LN + Sbjct: 326 -----TWQKP-------WAFRDYRSIDQEPAPLSDKEITKQNTANTWREKVLSLLNPFLA 373 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAA-----------MTLIEQQWQAIIAEGLG 625 G + E+ L +P+ + + ++ +++ E + Sbjct: 374 GWKEALSAEDKCAFLYRWLTEQQIPETLSVWDELEFEKTKKRPHLQVWKKVLSLLDEIVH 433 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGV 684 D +P L L L S V + ++ + KVV + G +G Sbjct: 434 VTGKDILPEEELCGILTDGLSALTFSMIPPTLDHVTVTSMDRGYAAEAKVVFIPGALEGS 493 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRR----------DDDRYLFLEALISAQQKLYISYIGR 734 +P+++ GF ++K +R ++++ AL A LY+SY Sbjct: 494 FPKKIDDSGFFTETEKQVLLKSARINLGNNLMELVQEEQFYTYLALTRASDALYLSYPAA 553 Query: 735 SIQDNSERFPSVLVQELID---YIGQSHYLPGDEALNCDESEARVKAHLT----CLHTRM 787 + S PS L++ L Y LP + A L+ L Sbjct: 554 AADG-SAAEPSFLLERLKALGYYTENMEILPPSPYHDDPSFFANPNQALSLLPEILRNGR 612 Query: 788 PFDPQNYQPGERQSYAREW--LPAASQAGKAHSEFVQPLPFTLPETV---------PLET 836 P N+ + + E+ L + AG + LP L + + Sbjct: 613 PSPTGNWAALKDWAEGNEYRELMESKLAGLRYQNTAARLPKMLARKLFMKGGRFYGSVTK 672 Query: 837 LQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT-------------EPFILEGLSRYQINQQ 883 LQ + + P + F + + + R E + Q + Sbjct: 673 LQNYRSCPYQYFLRYGIGIEERNTGEADYLDYGNYLHAGIHQFGEILKSQNRQWRQATDE 732 Query: 884 LLNALVEQDDAERLFRRFRA---AGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQS 940 + + +D E++ R +A + D + +T + +Q+ Sbjct: 733 EIEK-ISEDITEKITPRIKADALSSDQSAKYTRRVLDQTFRRALQRFRQWSRQSGFDTLD 791 Query: 941 MEIDL-------ACNGVQITGWLPQVQPDGL 964 ME + + +TG + +V DG Sbjct: 792 MEKEFYLRISASPTDSFTLTGKIDRVDTDGR 822 >UniRef50_B7J2J0 Exodeoxyribonuclease V, gamma chain n=26 Tax=Borrelia RepID=B7J2J0_BORBZ Length = 1079 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 87/604 (14%), Positives = 205/604 (33%), Gaps = 71/604 (11%) Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV--ADIDSYSPF 421 K P+ LD S + +REVE+L ++++ ++++ L DI + + Y P+ Sbjct: 282 KTPISTLDDSFKIIEAKNQKREVEILTNQIVHSMQKN-NLKLSDIAITCLQEKFNEYLPY 340 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS------RFVSEDVLALLD 475 I+ + + + A L+ L S F ++V LL Sbjct: 341 IEECLNKYEIEYSVLCY----NNLSRGESIIALKRLMDLFVSKNGTISNFSRKEVFDLLS 396 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 + +F+I+ L YL ++ + I +G + + L ++W G R L+ Sbjct: 397 NNKVMKKFNISTSELNYLIEFSDTMNISFGANKTHKENLNYDQNFLNSWEDGFNRFLMSE 456 Query: 536 AMESA-QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 + + E Q + I +L+ + SL +N ++ + + EW + Sbjct: 457 IFDEKYEEETQKESTRFQDQESIMKLITIVKSLYEDINYFKN---KAYKVYEWAEIIEIF 513 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAI------IAEGLGAQYGDA-----VPLSLLRDELAQ 643 + + + + ++ + ++ + + L Y + L + L + Sbjct: 514 IQKYIDLE-DFNTTDEYLQNKIKSFKNFPKDLNDNLYKNYLKEINEIKIEFYLFKIMLEE 572 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 L++E+ + + I + + K + LG + ++ +L+++ + Sbjct: 573 SLEKEKYGVMYKKNGILIANYKEIEYLQKKEIHFLGF--QKFNSKINYDNMNLLNEYYEH 630 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 + ++ + + +K Y+ + E S + +++++I + Sbjct: 631 --ENTEKEEITALFNLIFATSEKFYLYCSFQDNLS-PEINTSKTINKILEHIQKYE---- 683 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ---SYAREWLPAAS--QAGKAHS 818 K H DP ++ + +Y E A Q K Sbjct: 684 -------------KNFQIEKHPNENHDPVYFKDAKENYLINYDPEAYNIAKILQNSKPIG 730 Query: 819 EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQV-----NFRTEDSEIPDTEPFILE 873 + P + L L+ ++P + F++ L V E E + + F + Sbjct: 731 FKQNKIKLESPIKLNLYELKNALSNPYKHFYEKTLNVKIQDIRLENEIKEKQEEQIFSVI 790 Query: 874 GLSRYQINQ-QLLNALVEQDDAE---------RLFRRFRAAGDLPYGAFGEIFWETQCQE 923 + I LL+ + + R G +P+ + ++ Sbjct: 791 EIIYRLIKNSTLLHEYIMGKKDDARKAIEIIKNHIRYEIQQGSIPFNIDQKTTVNEILKK 850 Query: 924 MQQL 927 + +L Sbjct: 851 INKL 854 Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 85/198 (42%), Gaps = 18/198 (9%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEM-ILVQSTGMAQWLQMTLSQKFGIAANI 60 + +Y +N+++ + ++ + + D+ F+ E I+V++ + + ++ T+++ GI+ N+ Sbjct: 1 MYIYKTNKVNKIYNKIKELTQ---KDNIFKKETLIIVKNDLLREEIKKTIAKLNGISYNL 57 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMT---LLPQLLEREDFTLLRHYLTD 117 + A+ ++ + + + S+ L T +L +L+ E Y+ D Sbjct: 58 NIKKNAA--KSIYEISFKNPNIKKYIEENTFSFYLETEKFILYNILKTEKL----KYIKD 111 Query: 118 DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV---EGLGEAQAWQAPLWKALVE 174 + + +SK DLF Y + WE + E L + Q L+K L E Sbjct: 112 FKSTKNRYFFASKIIDLFHHYYSKFSKLIETWEDNGFLFQEENLKPYENMQKELFKKLFE 171 Query: 175 YTHQLGQPRWHRANLYQR 192 Q H+ + ++ Sbjct: 172 --KQKNILNLHKKIIQEK 187 >UniRef50_C0CXR8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0CXR8_9CLOT Length = 1216 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 104/728 (14%), Positives = 215/728 (29%), Gaps = 120/728 (16%) Query: 342 ILELENRA-----VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 IL+ A +E+ N R + +P+ EV + R+ Sbjct: 280 ILDRRPAWRFAQSPALDFLEQNLYRYNGRAWKGEQDQVKLFCGQTPEEEVRYVKSRI-ES 338 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 L + L RD+ V D+ +Y I F A +P+ + D+++ +P++E + Sbjct: 339 LVREQGLRYRDMAVATGDLAAYGREITRQFDQAG----IPFFMDDKKSILENPMVELIRA 394 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG---IDDDNVRE 513 +L F E+V L ++ R + T + + + W N +G G ID + + Sbjct: 395 VLEAVR-DFSYENVFRYLKTGLVYDRAEGTADEAQPV--WENAAGADSGGEAIDWEEASD 451 Query: 514 LELPATGQHTWRFGLTR------------MLLGYAMESAQGEWQS-----VLPYDESSGL 556 EL G R L Y W+ + + L Sbjct: 452 GELADVLLGETGGGADRRYSREEAAVMTDRLENYVRALGINGWKRWDSQWEAQFKGAENL 511 Query: 557 IAELVGHLAS-LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF----------------- 598 + + +L L R ++++ + R+ L + Sbjct: 512 NLQELNAFRQWILAPLRPLREAMSKDATVASVTQALRNYLESMELREKLEEYQAYFAARG 571 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-G 657 D + + + + G + L + ++ Sbjct: 572 LRGDENLAREYGQVYDRVEELFERLTGLLGDEKAERKSYAQILDAGFGEIQVGVIPATID 631 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD------ 711 V + + R +V+ +G+NDGV P++ G L+ + + ++ R + Sbjct: 632 QVMVGDITRTRLDGVQVLFFVGVNDGVVPQRK--NGGSLLGDRDREFFKAHRLELAPTAR 689 Query: 712 -----DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD-- 764 ++ L ++L I+Y GRS D PSVL+ E+ G Sbjct: 690 EDGCMQKFYLYLMLSKPSRRLVITYAGRSA-DGKSLRPSVLLGEVYKLFPGLTAEDGSTV 748 Query: 765 --EALNCDESEARVKAHLTCLHTRMPFDP-----QNYQPGERQSYAREWLPAASQAGKAH 817 + + + L D ++ Q + W + Sbjct: 749 KWPVQTPRDGKETLIQGLKTYRDLKEPDAADGALEDSQWERKFLELYRWFFGQEDYREEV 808 Query: 818 SEFVQPLPFTLPET----------------VPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 VQ ++ E + L+++ + F + L++ R E Sbjct: 809 KLLVQAAFYSYEERGIGRAAARALYGKILQGSVTRLEQYASCAYAHFLRYGLELMERREY 868 Query: 862 SEIP-DTEPFILEGLSR-YQINQQ-------LLNALVEQDDAERLFRRFRAAGDL----- 907 D + + R +Q+ + L + E + + G+ Sbjct: 869 ELEAVDMGNLFHQSIDRCFQVMKAQGRDWRNLTEEGRQGLVKESVSQVVADYGNTIMMST 928 Query: 908 -PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQI 952 Y + + LA++V E+ +Q+ Sbjct: 929 ARYAYLAGRVERMTDRTIWALAEQVKRGDFEPAGFEVSFSAVDNLKAMRIALSPDEELQL 988 Query: 953 TGWLPQVQ 960 G + ++ Sbjct: 989 RGRIDRMD 996 >UniRef50_A8STZ1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8STZ1_9FIRM Length = 1258 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 109/847 (12%), Positives = 233/847 (27%), Gaps = 132/847 (15%) Query: 53 KFGIAANIDFPLPASFIWDMFVRV-LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLL 111 + G + NID + +F + + F K + +++ + ++D + Sbjct: 65 RHG-SMNIDAIGLNRLAYRVFDELSINPGQVLEDFGKSMLVKRIL-----MENQDDLLMY 118 Query: 112 RHYLT--DDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLW 169 +Y+ D+ K S ++LF QY V R + E + Sbjct: 119 GNYMDKMGFVDEMK-----SMMSELF-QYAVDREEIDMAMEQMDSESST----------Y 162 Query: 170 KALVEYTHQLGQPRWHRAN----LYQRFIETLESATTCPPGLPSRVFIC-GISALPPVYL 224 + L + + H AN + ++ + L + + G + PV + Sbjct: 163 RKLHDIRLIYEKFEEHNANDQYIVAEQLSQLLAANVEKSQFISKSHMYFDGFTGFTPVQM 222 Query: 225 QALQAL-GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 + + L + F DI Sbjct: 223 KLVTQLMSHAASVTFAF---------DIDPDRIGLAKPKEYE------------------ 255 Query: 284 GQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL 343 +L ++ I + + +D DN++ Q +I Sbjct: 256 -------------------LFRLTKETIAAICKAAADVHVDIL-----DNVVMCGQGEIP 291 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 E + ++ SI + E + ++ ++ + Sbjct: 292 YRFRDDPCLAAFERNIFRYPHQKINGAADSIKLVRTDRARDEALYVASQIRKLV-REKGY 350 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 +DI V+ D+ + + + A + +P I + A + P + + L++ Sbjct: 351 RYKDIAVVAGDLHDVAGYYR----QAMDEYRIPVFIDENTALRGDPCSDTVRAFLAVMSD 406 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 F V LL + + + + + + +R G + + Sbjct: 407 NFSFNSVFRLLKSGMTEVAY----MDVERMENYALKRNLR-GYKSWLKEITDKNNSDYAQ 461 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + R ++ E ++ P + + + +L + L Sbjct: 462 EMDSIRRQIVSIFGEDCIDVYKPSSPNSKD---------TVTNYTKELYNFLDELHVCEK 512 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 LEE + F + A I + A+ + + + + + L Sbjct: 513 LEERRKRLYE--EKLF----DEGDAYGQIFDKIVALFDKVVTILGDEKMTVKEYAGVLEA 566 Query: 644 RLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP- 701 + I V + + R K + G+N+G+ P+ + Sbjct: 567 GISDMEIGIVPPTIDRVVVGDMTRSRLNHVKALFFTGVNEGIIPKPAKKGKILSNGDRQN 626 Query: 702 --------KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 D++ +++ +L LYI + N PS LV + + Sbjct: 627 LEKCGVTLAPSDKTNAYIEQFYIYTSLTKPSDNLYIVFRKMGEDMN-AVGPSYLVDRIRN 685 Query: 754 YIGQSHYLPGDEALNCDESEARVKAHLTCLH-------TRMPFDPQNYQPGERQSYAREW 806 D E+ +L + T Q G YA W Sbjct: 686 IFPDIEIEDYDLDSQIPETVNGALRYLVSRYDEVGSDGTLQAVKRLIEQQGGNTEYAT-W 744 Query: 807 LPAASQ------AGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTE 860 L A K S L + T + L+++ + F Q L + R Sbjct: 745 LGAMQSGYDYVNETKTLSPETVRLLYGTELTESVSKLEKYAECQFKYFLQYGLGLMDRET 804 Query: 861 DSEIPDT 867 Sbjct: 805 YQLNAAN 811 >UniRef50_B1C9D7 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9D7_9FIRM Length = 1111 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 86/598 (14%), Positives = 196/598 (32%), Gaps = 103/598 (17%) Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 D +Y L L + + + ++ ++ + DI L + S + + D Sbjct: 247 DTLYKLKKLAENNDEEVVTEIDKED---EKEKDIKFL----------ADNIFSYDTKTFD 293 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 ++I + EVE+ +L ++ ++ +DI V+ +D D+Y I F Sbjct: 294 DEINNIEIFKASTIYEEVEMTALNILKLI-KEENADFKDIQVLPSDYDTYKEIISETF-- 350 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + + + + + +L + +L++ + F + D+++ L + D+++ Sbjct: 351 --KKHNISFFLDNTTSIMDTNILRGILKILNIVEGNFKTHDIISFLKTGLT----DLSKT 404 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + + E GI+ + W R + E+ Sbjct: 405 DIETFENYALEFGIKGTM-----------------WTADFKR-------NNPDNEYD--- 437 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF---------- 598 +A L L++ L R L + ++E + D L F Sbjct: 438 --------LAYLNEKKDELMLPLITLRNDLKDKTSVKEITNIFYDFLEEFGLYEKIITLV 489 Query: 599 ----FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 + D E I + + + + LS L + +I Sbjct: 490 NKFKYKEDFENANKYAQIHNSIITALEQIYDFLGNEELSLSEYTKVLESGFNALKIGIIP 549 Query: 655 LA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK----------PKR 703 VNI +L RS K + +LG+NDGV P + G +++ + Sbjct: 550 STIDSVNIASLSRSRSSEIKYLFILGVNDGVLPSNFSNSGGIFSNKEKLKAINEGINLRT 609 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 ++ + D++RY ++ ++K+++SY + E PS ++ ++ D + + Sbjct: 610 TEQYKIDEERYFLTSVILKTEKKIFLSYPIT-GSNGDELLPSSIIFKIQDTMPKLKVKTL 668 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFV-- 821 D+ N +++ + + + + + + + K Sbjct: 669 DKN-NFEDNLSLISNYEATFKYLLNNKLHKNSSYKVNTLWDTLYDLYKEDDKGKYLIDIM 727 Query: 822 -QPLPFTLPETV----------------PLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 L F + + L+ + P F L+ R ++ Sbjct: 728 NSALSFNNKAVIKNKKLIDEIYKGEIVTSISRLETYAKCPFSYFVSYALKPKERKKNE 785 >UniRef50_UPI0001C37CA1 ATP-dependent nuclease subunit B n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37CA1 Length = 1112 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 104/697 (14%), Positives = 214/697 (30%), Gaps = 115/697 (16%) Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 I DI L + P +I EVE + + ++ Sbjct: 271 ISPDIAYL--------SSHVLRNKKYSPEEAPKPDNIKIFEARDMYSEVEYVSASIKRLI 322 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 L R+I V+ DI +Y+ I+A F +PY +S + V+ F SL Sbjct: 323 HSRKDLRYRNIAVISNDITAYAGIIKAAFKRYD----IPYFLSVEKPVTHTAVMVYFTSL 378 Query: 458 LSLPDSR-FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 + L SR F SE + +L + D++ + L + +W +D + Sbjct: 379 IDLLCSRKFRSELIFRMLKSGLT----DVSLTDISALENYC----YKWTVDSE------- 423 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 W+S + + E + + + R+ Sbjct: 424 --------------------------IWESEFTAPDDALDSLEAIRKTV--IEPVFALRK 455 Query: 577 GLAQERPLEEWLPVCRD-------------MLNAFFLPDAE-TEAAMTLIEQQWQAIIAE 622 L+++ ++ + + M++ D A + + I+ Sbjct: 456 KLSKKCTAKKICTLIYEHLVSGGIEKNVGRMMSGLINSDRAYEAAEIKRLWGCLIDILDS 515 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMN 681 + + S + + + S V + R K V ++G N Sbjct: 516 ICETLDENEMSFSEAAKLMKSMIGRINYSVPPQTLDAVMTASARTARLNAPKAVFIMGAN 575 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRR---------DDDRYLFLEALISAQQKLYISYI 732 DG +P Q+ G + K ++ +R + +++ + +KL+ISY Sbjct: 576 DGDFPNQVTVHGLFSEPDRQKLAEKDLLVSTPLADLIAAERLVVYKSVSAPSEKLFISYP 635 Query: 733 GRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ 792 S ++P+ ++ +I G ++ + A + H H + Sbjct: 636 L-SDLSGQTKYPAQIIDSIIKMFGTDRIRLTEDDIPVHYYAATL--HSAFYHYMQNRESN 692 Query: 793 NYQPGE-------RQSYAREW-----LPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 R Y R Q SE ++ L P + L+ + Sbjct: 693 TPSAAAVEQLLMSRPDYKRRLIYVLSRSGHEQEYLIESEIMENLKSFSPLRLSSTGLEEY 752 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIP------DTEPFILEGLSRYQINQQLLNALVEQDDA 894 + F L ++ R + E F GL + Q+ ++ E Sbjct: 753 DLCHFKFFCDKCLGLHPREKIELDARIAGELTHECFF--GLLSSRSKQEFISMSYEDMRE 810 Query: 895 ERLFRRFRAAGDLPYGAFGE-----IFWETQCQEMQQL----ADRVIACRQPGQSMEIDL 945 E + + G FG+ + + + ++ ++A E+DL Sbjct: 811 EIGRKAEEYRNNKLAGDFGKDAKFGLIFSKLTDRLSEVFIHTQQSLMASDFVPHKFELDL 870 Query: 946 -ACNGVQI-TGWLPQVQPDGLL-RWRPSLLSVAQGMQ 979 + V + G Q+ G++ R ++ ++ Sbjct: 871 RESHSVVLPFGNGKQLSFGGIVDRADICKINGRDYVR 907 >UniRef50_A8U8N1 Exonuclease RexB n=1 Tax=Carnobacterium sp. AT7 RepID=A8U8N1_9LACT Length = 1206 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 75/574 (13%), Positives = 167/574 (29%), Gaps = 71/574 (12%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I + Q E+ + + ++ +DI+V+ ++D Y I+ +F Sbjct: 326 IEVWAAENKQAEITHVAKEIRKLVATGH-YRYKDILVLTRNMDDYLAIIEPLF----TSH 380 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF----DITEEG 489 + I HP++E +L+S+ + DV+ LL ++ F +++E Sbjct: 381 AIELFIDSAELMNQHPLIEVIDALVSIYKRNWRYADVMRLLRTELVIPAFEEQESLSKER 440 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + + Q V + D L + W Y E A+ + + Sbjct: 441 AQRVSQQVERAQKYREKVDITENVLLAYGYEGYHWTKTEPWHYTRYFYEDAEFQSDNDQR 500 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA------ 603 ++++ I V L L + + L + + ++ + + D Sbjct: 501 IEQTANSIKTAVSGL------LVPFFKRLEKAKTSKDAAKELYLFMETVGVNDQIGFWRD 554 Query: 604 --------ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 E Q + ++ E + + L L D S Sbjct: 555 QAIEDNNLEEARKHEQTWQTFLQLLDEYVEVLGDEPFDLDSFHAILMTGFDNATYSMVPP 614 Query: 656 A-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK------------PK 702 + V + R K+ +LG+ D P + + K Sbjct: 615 SIDQVTFSGIEGTRIGTAKLTFMLGVTDAHLPAKTENKSILTEEDRDFFSYFLDETQYLK 674 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 + + ++ +A + + +KL SY N + S V + Sbjct: 675 PTVEAVMASEPFIAYQAFLDSSEKLIFSYPTSDETKNGPKL-SPYVDRIAKAFQLPIQAK 733 Query: 763 GDEALNCDESEARV------KAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 + + ++ T M + Q G+ ++ + + + Sbjct: 734 LMDITSLEDPTGNELLDFVGTKKTTISQLLMVLRKEQDQKGQLNAFWQNLYMFFKRDKQV 793 Query: 817 HSEFVQPL-------------------PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNF 857 +F L + + + L+ F+A F L++ Sbjct: 794 ARDFNHLLVSLVKKNVPMPLRNTIATDLYGKDLYLSVSRLEAFYADHYGHFLTYGLKLKE 853 Query: 858 RTEDSEIPD-TEPFILEGLSRYQINQQLLNALVE 890 R P T F + L + + ++ + Sbjct: 854 RDVFELSPAGTGEFFHDALDH--LFKTIIQKNLS 885 >UniRef50_A6NVW2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVW2_9BACE Length = 1118 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 99/777 (12%), Positives = 213/777 (27%), Gaps = 117/777 (15%) Query: 307 GRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRP 366 R L L + A ++ + E + P Sbjct: 241 ARHTARSLLRLARENGVPARTEIQEN----------RAKEGPEELAFLEAHLFDAPE-TP 289 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 + I+ SP EVE +L ++ ++ RDI V ++ Y I+ +F Sbjct: 290 WAEKPAHISLFKAGSPYAEVEYTAGEILRLV-QEEGYRFRDIAVTARSMEGYGELIETIF 348 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 +P ++ P+L S L+ + +D+ L + ++ Sbjct: 349 ARYG----VPVFLAKMSDILQKPILALITSALAAVAGDYQYDDLFRYLKTGLT----GVS 400 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 EE L + + +R G + + GY + + Sbjct: 401 EEDRDLLENYALKWDLR-GSRWTQKGDWTMHPK--------------GYGLPVRPEDEAL 445 Query: 547 VLPYDESSGLIAELVGHLAS--------LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 + + + + L L + + LEE ++ Sbjct: 446 LARLNAVRRQVIAPLEELRKNPDHTGLGHTKALYAFLERIGLPERLEERTAALQE----- 500 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-G 657 + + + + + + + L Q + ++ Sbjct: 501 -RGEPALAQEYSQLWDILCNALEQCAQIVGDTPMEADEFARLFSLVLSQYDVGAIPVSLD 559 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF------DLMSQKPKRGDRSRRDD 711 V + + K V LLG +DG P+ G L++ + + Sbjct: 560 RVTAGEMPRLAHKHCKAVFLLGADDGAIPQAAPSPGLLNDDDRSLLASYGLELAPTLTEK 619 Query: 712 ---DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 + + E A ++L +S+ E+ P+ L+ L + E Sbjct: 620 LNRELTIVYETCALAGERLSVSWAAM-GSGGEEQRPAFLIPRLRGLFPALRPVTEAELEG 678 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 L+ + + + + E+ P + +A L Sbjct: 679 AF--------RLSAPRPALELAGRYPEAAQALRAMPEYAPLVERMEQAAGLTRGKLSRAA 730 Query: 829 PETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI-PDTEPFILEGLSR--- 877 + + + ++ + F Q L+ R + P+ F+ L Sbjct: 731 VDALYGSRVPMSASRMDKYKSCHFSYFMQYGLKAEPRKKAGFQAPEYGTFVHYVLEHVFQ 790 Query: 878 --------YQINQQLLNALVEQDDAERLFRRF-RAAGDLP-YGAFGEIFWETQCQEMQQL 927 ++ L+AL ++ + A + P + + + ++ + Sbjct: 791 SEEWRDENGGVDGDKLDALTDEIVERYIKEELGGLAEETPRFRYLFQRLLKPVRAVVRNV 850 Query: 928 ADRVIACRQPGQSME-----------IDLACNGVQIT-----GWLPQVQPDGLLRWRPSL 971 A+ + A + E ++L +GV I+ + DG L R Sbjct: 851 AEELSASDFKPIAFELGFGSGKDLPPVELEVDGVTISISGFVDRVDGWVKDGRLNLRVVD 910 Query: 972 LSVA----QGMQLW----LEHLVYCASGGNGESRLFLRKD----GEWRFPPLAAEQA 1016 +W L+ L+Y + LF + G P A A Sbjct: 911 YKTGRKSFDLTDVWNGMGLQMLLYLFTLQKEGRDLFGGHEIDPAGVLYLPARDAVIA 967 >UniRef50_D0BK92 Exonuclease RexB n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BK92_9LACT Length = 1189 Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats. Identities = 92/654 (14%), Positives = 205/654 (31%), Gaps = 92/654 (14%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREV-EVLHDRLLAMLE 398 D LELE + E S + R ++ + + ++E+ E L + L Sbjct: 288 PDFLELEQYWLETSGGLETSSNRTSRKIED----LQWTTYEDERQEIQETLAT--IKTLV 341 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 + +DI ++ +++ +Q + + +PY + + HP+++ ++ Sbjct: 342 DSGKYRYQDIQILSRNLEEQQTLLQPLLETY----QIPYFMDLSDTMEHHPLIQVLDAIF 397 Query: 459 SLPDSRFVSEDVLALLDV-----PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN--- 510 ++ + +++ LL P+ A + + LR + R +D+ Sbjct: 398 AIQKHFWRYHNIMNLLRSEYCFWPLNRANLENKHDEEVTLRDALIHY--RQKLDETETII 455 Query: 511 --VRELELPATGQHTWRFGLTRM----------LLGYAMESAQGEWQSVLPYDESSGLIA 558 + TW + + + L+ + AQ + ++ E Sbjct: 456 LAQGYEGKDWISRKTWNYQVENIDEDSLSSREVLVHQQLTQAQELREQIVSLLEPFYKKL 515 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 + V + L + W ++ D +T + ++ Sbjct: 516 DKVETTKEAITLLYQLLEKIGVTEAFLYWRNHAANI------GDIQTARRQDQVWNEFLK 569 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCL 677 ++ E + + + + L + + + + +R P KV Sbjct: 570 LLEEYVYIFGDEPFDWEIFQLLLHTGFEHTHYNMAPSTLDQLTCTGIDSVRYSPKKVTFA 629 Query: 678 LGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR--------------YLFLEALISA 723 +G++ GV PR G LM+ + + S+ D R +LF + L SA Sbjct: 630 IGLSQGVLPRMEEESG--LMTDEEREYLLSKLDSGRFLHPTTIQKQSVEPFLFYKVLTSA 687 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 +KLY+S ++ S V+ +++ + + E V H Sbjct: 688 TEKLYLSMHHTD--KGAKLKSSSFVERILNQYEITTQDGNQKQQERFEQGEFVTIHELFT 745 Query: 784 HTRMPFDPQNYQPGERQSYAREWLPAASQAGKA-------------HSEFVQPLPFTLPE 830 + E LP + K H + LP L Sbjct: 746 TLLQKLRQYKFSKEEDIPSIWIALPHLLRQDKDFQQEYHTLVDSVFHLNIAKQLPKELAA 805 Query: 831 T-------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD------TEPFI--LEGL 875 + ++ F+ P F Q L V R E E F + + Sbjct: 806 ELYGNHLYLSTSQVETFYKDPFSHFLQYGLNVRERREFELTAAGSGEYFHETFDQFIRKV 865 Query: 876 SRYQINQQLLNALVEQDDAERLF------RRFRAAGDLPYGAFGEIFWETQCQE 923 +++ + ++A + + +F RF+ P + ++ + ++ Sbjct: 866 HELKLDIRAIDAATTEKVLKEIFDSMNDDARFQILNATPRMNWTKVLLQDTIRQ 919 >UniRef50_Q038V6 ATP-dependent helicase/deoxyribonuclease subunit B n=8 Tax=Lactobacillus RepID=ADDB_LACC3 Length = 1179 Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats. Identities = 107/729 (14%), Positives = 208/729 (28%), Gaps = 98/729 (13%) Query: 307 GRDYIYLLSD---LESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 GR Y L ++ LD F P + + L + N++ + + Sbjct: 256 GRLYHRLYQKAKTMKVPIRLDRFAKPRP------LSEGMKHLADWWQTSTNLQPQAPAQT 309 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 + + V P E+ + ++ + + RD +++ +D Y+ I Sbjct: 310 -----AQNKEVELAVATDPYHELRTVARQIYQAVRQ--GARYRDFLILARRLDPYAAVIP 362 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA-AR 482 A+F + +P R + HP++ SL ++ D + +DV+ LL +L Sbjct: 363 AIFE----EFNIPQFTDLERPMKDHPLVVLIESLFAIQDHDYQYQDVMRLLHTELLLPEN 418 Query: 483 FDIT--EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 DI + L + +GI + L A Sbjct: 419 MDIAAFRDALDTTDNHLVRTGITGKKRWTQTDPWRYFQRNPNADDSQLD--------PEA 470 Query: 541 QGEWQSVLPYDESSGLIAELVGHL------ASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 Q + + +L+ L W + L W Sbjct: 471 DKTAQINAIKTLVADTVPQLLRQWQTAKTGREAAASLYQWLQTTGVIDQLNVWRQTANA- 529 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 D A + ++ + R+ LA +Q Sbjct: 530 -----DGDLSRSQANEQAWDTFTQLLNDYATILGEADFNRDQFRELLAAGFASATYTQIP 584 Query: 655 LA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 V I +R K V ++G + P G +++ + ++ ++ DDR Sbjct: 585 STLDSVVISETGLVRLAKAKHVYVIGATNTAMPDVPNDSG--VLNSEERQLLAAQLPDDR 642 Query: 714 YL--------------FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 +L ++A +KL +SY ++ Q+NSE S ++L + + Sbjct: 643 FLPEQGPTTTLGDPFINYLGFMAASEKLTLSYPMQNTQENSENQASPYFRQLAQALQLTP 702 Query: 760 YLPGDEALNCDESE----------ARVKAHLTCLHTRMPFDPQN---YQPGERQSYAR-- 804 L V+A H ++P ++ + A Sbjct: 703 ATWAPAGLGTSLKAVLGSQRAMLSDFVRAAGEAQHQKLPLSRSWQGVLASLKQTTLAPLA 762 Query: 805 EWLPAASQAGKAHSEFVQPLPFTL---PETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 + L + L L V + L+ ++ + F + L + R E Sbjct: 763 QKLAGSLTYQNDPGRLDPTLAVQLYGRDMNVSVSRLETYYRNQFEYFLKYGLLLQPRPEF 822 Query: 862 SEIP-DTEPFILEGLSRY--QINQ--QLLNALVEQDDAERLFRRFRAAGDLP-------- 908 P DT L +Y Q+ Q L + D A + A P Sbjct: 823 ELSPADTGSLFHAVLDQYLTQLRDAGQTLADVTAADVAAAVPPLVAAITKRPGYEILGST 882 Query: 909 --YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLR 966 Q + + + R + M +L + G + Sbjct: 883 HRMAYLTSRLSRLLIQVLTNMRQQ--QRRTGFRPMRTELQFGRI---GDTRGLPGLSWPL 937 Query: 967 WRPSLLSVA 975 ++V Sbjct: 938 PHGGRVNVR 946 >UniRef50_C4Z483 Putative uncharacterized protein n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z483_EUBE2 Length = 1109 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 71/531 (13%), Positives = 166/531 (31%), Gaps = 70/531 (13%) Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 +N + R+++ R D+ I + + E+ ++ + Sbjct: 296 FKNSEELDFLEQNLFRNNSGRFNQKTDN-IVIYEGAVAKEELTFAAGEIIRLTRLC-GYR 353 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 +I ++ AD+D Y + +PY + +R +P + A L + ++ Sbjct: 354 YNEIAIVTADMDGYGKLAANILKQND----IPYFLDYKRHVTDNPFIAAINGALGIIENN 409 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + + +L L + E + L + GIR + T +T Sbjct: 410 YSYDSILGFLRTG----MSGMEREDIDLLDNYCVAVGIRGRGKWHEPWIRKFRGTVNNTD 465 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 L + + + VL +A++V L L++ Sbjct: 466 LEKLNSLR--TMITDMLDPLEEVL--KSKESNVADMVKALYEFLVR-------------- 507 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 E+ + ++ + D + ++ ++ + + V + LA Sbjct: 508 EDMEQKVSVLNDSEYTGD-----EYVQLYKKVIEVLDKMYALLGSEKVGIKEFNKILASG 562 Query: 645 LDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 + +I V I + R KV+ +G+NDG P++ S + Sbjct: 563 FQEIKIGLIPQTNDCVVIGDIERTRLDNIKVMFFVGINDGNVPKKADSRSVLSESDREYL 622 Query: 704 GD---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 D R + R+ + + +KLY+SY ++ + + PS +++ + Sbjct: 623 EDKGIVMSASVREKAFTQRFYLYLIMTKSAEKLYMSYAVKN-SEGAALMPSYIIRSMRKM 681 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG 814 L + + +P ++ E + E + + G Sbjct: 682 FSHCLKLSYKDTAQQNSYVT------------IPQAANSFDNTEIAANVDEDIIDSLTGG 729 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 + + + + F P+R + + + + R E + P Sbjct: 730 RLVG--------------SVTSFENFAECPLRYYLRYGVDLKEREEFTFSP 766 >UniRef50_UPI0001699EF8 Exodeoxyribonuclease V, RecC subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699EF8 Length = 196 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 83/203 (40%), Positives = 120/203 (59%), Gaps = 7/203 (3%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M+ YHSNR++ L + + L P E I+VQ+ GMA+WL L+ + G+AAN+ Sbjct: 1 MILSYHSNRMERLLDHLLEQL-STPLGSPLGRETIVVQNPGMARWLSQQLALRSGVAANL 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +FPLPASF W+++ L E+P ES F+++S+ W +M LLP LLE+ F L+ YL DS Sbjct: 60 EFPLPASFTWNIYQAWLGEMPAESGFDRESLHWCIMGLLPGLLEQPAFAALQRYLEGDSG 119 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + + +QLS + ADLFDQYLVYRP + WE + G + + W+A LW+A+V T Sbjct: 120 ELRRYQLSGRIADLFDQYLVYRPQMVLAWENSAIETGT-QDEPWKAALWRAIVAQTQ--- 175 Query: 181 QPRWHRANLYQRFIETLESATTC 203 HRA L+ RF + Sbjct: 176 --AEHRAALFDRFQRMVARGDAP 196 >UniRef50_C8NER5 Exonuclease RexB n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NER5_9LACT Length = 1190 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 96/664 (14%), Positives = 213/664 (32%), Gaps = 97/664 (14%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 ITF + E + ++ M++ + +DI ++ +++ F++++ Sbjct: 323 ITFTKYTDEREEYQETFAQIKRMVQTG-NVRYKDIQILGRNLEENHLFLESLLKQYA--- 378 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT---EEGL 490 +P I + + HP+++ +L ++ + D+++LL + D ++ L Sbjct: 379 -IPGFIDLSDSMEHHPIIQVLDALFAIWQYDWRYADIMSLLRSEYVLWHKDDETSLKDQL 437 Query: 491 RYLRQWVNES----------GIRWGIDD-DNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + RQ ++E+ G +W + E + + TR+LL Sbjct: 438 QAFRQQLDETETVILANGYEGYQWTNGKPWSYVEDSIDEDSKVEQTDKNTRVLL-----K 492 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 A+ + + E + L L ++ W V + Sbjct: 493 AEQLRNELTSILLPAFKKIEQSTTTKEAVSVLYQLLLTLGVDQSFIYWRDVAAE------ 546 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GP 658 D ET + ++ ++ E + + L +Q + Sbjct: 547 EGDVETARRQEQVWTEFIRLLDEYIYIFGEKSFDWETFMMLLHTGFEQTHYNLAPSTLDE 606 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL--- 715 + I + +R P K+ +G++ GV PR + G L++ + + D R+L Sbjct: 607 LTITGMDSVRYTPKKITFAVGLSQGVMPRNIDETG--LLTDDERELFSNHLDSGRFLAPT 664 Query: 716 -----------FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 F + L+SA + LY+S +D E+ S +Q L+ + Sbjct: 665 TGQLQSVEPFVFYQLLMSATEHLYLSCAIS--KDGKEQLVSNFIQRLLKHYELEEIDGSF 722 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHS------ 818 N E V + + ++ E + + +P + S Sbjct: 723 NRQNRLEQGDFVVPYELFTTLLLKMRENKFKEKEEIDFLWKLIPHLLKVDATFSANYHAL 782 Query: 819 -------EFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 LP +L + + ++ ++ P F Q L++ R E Sbjct: 783 LASVFRLNVASKLPLSLAQELYGNQLNLSTSQIETYYKDPFSHFLQYGLRLKERQEFELS 842 Query: 865 PD------TEPFI--LEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLP-------Y 909 P E F ++ L+ I+ + L + + +F R + Sbjct: 843 PANTGEYFHEFFDQFIKELNARGISLRDLTLEQKLAIEKDIFNRMKDNPKFAILASSRRL 902 Query: 910 GAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG-------------VQITGWL 956 + +T Q L + +A E+ +G + + G + Sbjct: 903 NFVQGLLHQTLMQTTNALQKQALALETKPWMTEVVFGTSGNYPIHIPIGHNQSIHLRGKI 962 Query: 957 PQVQ 960 ++ Sbjct: 963 DRID 966 >UniRef50_A8RRN9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RRN9_9CLOT Length = 1196 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 138/1047 (13%), Positives = 287/1047 (27%), Gaps = 199/1047 (19%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQ--MTLSQKFGIAANIDFPLPASFIWD 71 ++ V +E ++ P + +++V Q + + L + GI NID + Sbjct: 25 TRMLYDRVIKESMEHPEQKYLVVVPEQFTMQTQKEIIRLHPRHGI-MNIDILSFKRLAYR 83 Query: 72 MFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKA 131 +F + IP +SM + + L +R +L +L + QL S+ Sbjct: 84 VFEDLGVRIPVVLDDMGKSMVLRKVAGL----KRGKLSLYSGHLEQTGF---IGQLKSQI 136 Query: 132 ADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQ 191 ++L+ QY + PD L L + ++ EY + Sbjct: 137 SELY-QYGIT-PDMLRDVRGEADSPLLAQKLEDLEVIYSGFREYIESHYITA-------E 187 Query: 192 RFIETLESATTCPPGLPSRVFI-CGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGD 250 ++ L L + + G + PV + + L + Sbjct: 188 EILDILCRELPKWEPLKDSIILLDGYTGFTPVQYRL---------VELFLMHAREVVCTV 238 Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 D A + + + R AS K Sbjct: 239 TIDSRENAYKESSIQHLFYMSRHTVCRV----------------------ASMAKQ---- 272 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 + +++ + + +E+ + R + Sbjct: 273 ----HGIPKKEDIICSRRPA-------------WRYDESPELDFLEQNLYRYSGRTWEGK 315 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 + I + +P E + R+ M+ ++ + RD V+ D+ SY + F A Sbjct: 316 EERIQVYKGRNPAGEAAYVCSRIEQMI-KEEGMRYRDAAVITGDLPSYGRELAHQFDEAG 374 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE-- 488 +PY + D+++ +P++E + L + F E L ++ + TEE Sbjct: 375 ----IPYFLDDKKSILENPMVELIRAALEMVK-DFSYESAFRYLKTGLVYDKAGSTEERA 429 Query: 489 ------------------------------GLRYLRQWVNESGIR-WGIDDDNVRELELP 517 L +V GIR W D Sbjct: 430 AADTAADTSGDAGEADAGSGFNGSREHAEQMTDRLENYVRALGIRGWKRWDSCWERQYRG 489 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 + RM + + P E+ + AS+ L + Sbjct: 490 GEKLNLKELNQYRMW----------ILEPLRPLREAFKAEGATI---ASVTAALRQFLEH 536 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 + LEE+ L D + + + G + + Sbjct: 537 MELREKLEEYRDFF---LERKEPGDENLAREYGQVYDRVLELFERLEGLLGAEKADMKNY 593 Query: 638 RDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 L + ++ V + + R KV+ +G+N+G P++ G L Sbjct: 594 IQILDAGFQEIQVGVIPATVDQVMVGDITRSRLEAVKVLFFVGVNEGTVPQRK--NGGSL 651 Query: 697 MSQKPKRGDRSRRDD-----------DRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 +S + + R + ++ + ++L ++Y G + D + PS Sbjct: 652 LSDRDRAALRKMDIELAPTVKEDGCIQKFYLYLMMSKPSRQLVLTYAGLTP-DGKSQRPS 710 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT-----------------RMP 788 L+ E+ L + + L Sbjct: 711 NLMGEVGKLFPGMKTLDEHSVEWPVRTGRDARELLIQGLRGMQEQGEDDREREDAAFMQL 770 Query: 789 FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVR 846 F R R+ + AA + + + + L++F + Sbjct: 771 FQHFYTSQEHRDK-VRQLVDAAFYSYEERGIGRAAARALYGRELQGSVTRLEQFASCAYA 829 Query: 847 AFFQMRLQVNFRTEDSEIPDTEPFILEGL-------------SRYQINQQLLNALVEQDD 893 F + L++ R E E + L R Q ++L + Sbjct: 830 HFLRYGLELMERQEYEL----EAVDMGNLFHQSIDRCFASMKDRGQDWRELTEEGRKSLV 885 Query: 894 AERLFRRFRAAGDL------PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL-- 945 E + + G+ + + LA++V E+ Sbjct: 886 KECVTQVTEEYGNTIMSSSARNAYLAGRVERITDRTIWALAEQVKKGDFEPVGFEVSFSA 945 Query: 946 ------------ACNGVQITGWLPQVQ 960 +Q+ G + ++ Sbjct: 946 IDNLKAMRIGLSEDEELQLRGRIDRMD 972 >UniRef50_UPI0001BC38B0 ATP-dependent nuclease subunit B n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC38B0 Length = 1097 Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 119/968 (12%), Positives = 278/968 (28%), Gaps = 159/968 (16%) Query: 57 AANID----FPLPASFIWDMFVRVLPEIPKESAFNKQSMSW-----KLMTLLP-----QL 102 AN D F +P RV+ P FN +++ ++ L + Sbjct: 27 CANPDKKYVFIVPEQSSLQAQKRVVRMHPSHGVFNIDVLTFGRLCYRVFEELQIELKETI 86 Query: 103 LEREDFTLLRHYLTDDSDKRKLFQLSSK----------AADLFDQYLVYRPDWLAQWETG 152 + ++R L + ++ + + ++L QY + PD L + Sbjct: 87 DDTGKNLIVRKILNNIKSDFRIIKAGRRQGFVSEMKSMISEL-KQYGIT-PDMLKEIAVS 144 Query: 153 HLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVF 212 + L + + ++ Y + L RFI+ L Sbjct: 145 AGSDRLRDKLEDISLIYSEFENYIRDRFVTVEDKPELLYRFIDN-------SDLLKGSTV 197 Query: 213 IC-GISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFED 271 + G + PV + ++ + + + Sbjct: 198 VFDGFTGFTPVQYRLIEKIA--------------------------------LQAENIIV 225 Query: 272 RELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTP 331 N D + +D I L + + + Sbjct: 226 TVTISSPAINNINTDMGMDELFY-----------MSKDTIRKLGVIADNVRIPF------ 268 Query: 332 DNLLHNIQSDILELENRAVAGVN-IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLH 390 L+ I+SD + R +N +EE N I + + E++ Sbjct: 269 --LMQRIESDHSKYRFRNSPALNFLEENIFRYNGSTFGGSTEDIHISEHLNGKEEIQYAA 326 Query: 391 DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 +L + DI V++ D D+++ +F + +P+ + ++R+ +P+ Sbjct: 327 AAILKEVRTH-GYRFNDIGVILGDKDNFANETARIF----KESGIPFFMDNKRSLIGNPM 381 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 +E +++L RF E V +L + + + ++ GI G D Sbjct: 382 VEYIRGIIALIKERFSYEAVFRVLKNGLC----GFERDKVNIFEDYILAFGIN-GFD--- 433 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 R E + GL ++ E ++ V + + Sbjct: 434 -RYCEKFVRAYKSKEMGLD--VINEVREDFCCLISEFYSDMTKGTKASDYVNAVYDFME- 489 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 + L E + + D D + ++ + Sbjct: 490 ----------KENLYEEMKMLAD-----NTEDEDKAEEFRKSYGHVVTLLERIYDMLGDE 534 Query: 631 AVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 + + + + ++ ++ + V + L R KV+ +LG N+G+ P+ Sbjct: 535 PMTVKEFAEIMDAGFEEIKVGIIPPSNDCVMVGDLERSRIDNIKVLFVLGANEGIIPKTG 594 Query: 690 APLGFDLMSQKPKRGD---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 G ++ D + + + + LY+SY GR D Sbjct: 595 DNHGILSEDERMTLSDMQIVLSPTPKEKVFMQNFYLYLNFTRPENTLYLSY-GRYNDDGK 653 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDE-------SEARVKAHLTCLHTRMPFDPQN 793 E PS ++ + D Y P + S+ Sbjct: 654 EIRPSRVIGIISDMYDIKPYHPDITDFLTNRQNSFHLVSDYAKIKDYDADKNLAAVISYF 713 Query: 794 YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQM 851 + ++ + + ++ + + + E + + ++ + F Sbjct: 714 VNDDVYGNIIKKIIDSFNENVMSDNLTKEAAKMLYSENLTASVSRIETYAGCAFSHFLTY 773 Query: 852 RLQVNFRTE---------DSEIPDTE----PFILEGLSRYQINQQ----LLNALVEQDDA 894 L + R E D E + GL+ ++ + +N ++ A Sbjct: 774 GLGIGERQEHKITNIDIGDIFHKTLEYMGCTLMENGLNFGSLSDEERKDFVNVAFDKITA 833 Query: 895 ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL--ACNGVQI 952 + + F+ + + + + + +++ A + E + NG+ + Sbjct: 834 DYKYSFFKESAAN--EFLKMRLSDIVNRTVWAMGEQINAGSFIPAAFEHNFIRNINGMTV 891 Query: 953 TGWLPQVQ 960 G + ++ Sbjct: 892 NGKIDRID 899 >UniRef50_C9A8J1 Exonuclease RexB n=4 Tax=Enterococcus RepID=C9A8J1_ENTCA Length = 1205 Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 95/620 (15%), Positives = 194/620 (31%), Gaps = 66/620 (10%) Query: 307 GRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKR 365 GR Y L+S ++ ++D + ++ + N + Sbjct: 273 GRTYYQLIS-FARENQVPIYLDQKLSVNQEVDKEAKGSMQQAYNEIETFWRQTQSQVNYQ 331 Query: 366 PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE---EDPTLTPRDIIVMVADIDSYSPFI 422 + + +P+ E+ + + M+ P L R+I +++A+ + Y +I Sbjct: 332 QQSSVKDFLAVWKVGNPEEEIRQIAASIRGMMSDKKRYPALRYREIQLLIAEPEIYHQYI 391 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 +F + +P+ I + + HP++E + + F D+L LL + Sbjct: 392 PKIF----TEFEIPFYIDEEQMMAQHPLVEFLNAFFACQSYGFRLNDILRLLRTELYLPA 447 Query: 483 FDITEEG-----------LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +E + + G + EL Q Sbjct: 448 AYRSEADWLVGRDQFRKLVDITENKALAHDFQ-GASWTRNEDWELIEYLQSEEEQTDKVD 506 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 L Y + + Q V D L A + L + E L W Sbjct: 507 LTAYTNQLRRAFKQDVA--DTLDWLTAARTNR--DAVELLYRFLLNAGVEEQLRHWRD-- 560 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 A + Q ++ E ++ +L D L L+ Sbjct: 561 ----QAIQQGKLDQARNHEQAWQALMDLLDEYAAIYGEESFDFALFEDVLLTGLENVTFG 616 Query: 652 QRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 + A VNI L R K+ G+N+ PR++ L++ + ++ + Sbjct: 617 KIPTAIDQVNINRLDLARPKQAKITFAPGLNETALPRKIENK--TLLTNEERQHFNQLFN 674 Query: 711 DDRYL--------------FLEALISAQQKLYISY-IGRSIQDNSERFPS--VLVQELID 753 ++YL F L+SA + L +SY + Q N + P +V+ L Sbjct: 675 GEKYLRDTVVEGSVKEPFAFYSVLLSATEHLSLSYAVNFDTQQNIKMSPYLDRVVKRLDV 734 Query: 754 YIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD-----PQNYQPGERQSYAREWLP 808 + + L R + ++ P+ ++ ++ EW Sbjct: 735 PLQERGILTLVSDPRNYVGSYRGLIYQINNLSQQAQKNKENLPRVWEQLKQALLRSEWTD 794 Query: 809 AASQAGKAHSEFVQPLPFTLPETV---------PLETLQRFWAHPVRAFFQMRLQVNFRT 859 A+Q ++ + P+P + + + ++ F+ + F L++ R Sbjct: 795 LAAQVFESQTHQNIPIPLSQAQAAALYGPSIYSSISQMETFYQCEYKYFVSYGLRLKERE 854 Query: 860 EDSEIPD-TEPFILEGLSRY 878 P T F + L R+ Sbjct: 855 VYGLNPAMTGEFFHDALDRF 874 >UniRef50_C2EDG9 ATP-dependent deoxyribonuclease, subunit B n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2EDG9_9LACO Length = 1170 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 74/602 (12%), Positives = 181/602 (30%), Gaps = 64/602 (10%) Query: 337 NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 + D+ LE+ + V + S+ + + E+ ++ M Sbjct: 289 RVSQDLCNLEDYWINSVAGFSAKEKATF-----ENDSVKIYGAKTRTEEIRFAAAKIRQM 343 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + +D +++ +D Y ++ +F A +P + ++ HP++E + Sbjct: 344 VAV-EGYRYKDFLILTRHLDLYKNVLEPIFAKA----KVPIFVDLQKKVSDHPLVELLNA 398 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEG----LRYLRQWVNESGIR---WGIDDD 509 L ++ + D++ LL +L + D+ E L + + G W + + Sbjct: 399 LFAVKRRHYRYNDMMRLLKTELLIPK-DLKVETYRRMLDQTENLILKFGYEGSAW-LKEK 456 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP--YDESSGLIAELVGHLASL 567 + + T R+ + + + +LP + + + Sbjct: 457 DWIYYRFGESDFGTRTDAEDRITKE--VNVIRRYVKEILPPFFKQIDEAENGRKAAVC-- 512 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 L + ++ LE+W + + + + ++ E + Sbjct: 513 ---LVNFLVDNGVKKRLEDWRQNLME------QGLLQESERPEQVWNLFCQMMDEFVENL 563 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 + L D + + V+I ++ KVV ++G D V P Sbjct: 564 GDLPFEEEDFLNLLQTGFDAGEYRRVPASLDEVSISETGMVQPTDRKVVFMIGSTDLVMP 623 Query: 687 RQLAPLGF------DLMSQKPKRGDRSRRDD--------DRYLFLEALISAQQKLYISYI 732 ++ LM + + D+ + +L A +S +KL +Y Sbjct: 624 DRIQNKSLLSDGDRSLMLENALLSENQVLDETSEKSMLSEPFLNYLAFLSPTEKLIFTYP 683 Query: 733 GRSIQDNSERFPSVLVQELIDYIG------QSHYLPGDEALNCDESEARVKAHLTCLHTR 786 + D + S V+ + + ++ ++ H ++ Sbjct: 684 HGNDADGGIKM-SPYVERIKQHFLLEELEISEFDKLSTPKGTIEDLICEIRRHADEKNSV 742 Query: 787 MPFDPQNYQPGERQSYA--REWLPAASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWA 842 F Q Y + + + + Q + + + L+ F+ Sbjct: 743 PAFWKQVYAKMKTVDAEMTEKVMSSLRYRNIPEQLTAQNARKLYGKELNTSISKLETFYK 802 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDT--EPF--ILEGLSRYQINQQLLNALVEQDDAERLF 898 +P F + L + R + F +L+ R L + + +F Sbjct: 803 NPYEYFLRYGLGLMERDVFEMSAASTGSYFHAVLDAFFRLLFKNNLTLKNLSSEQFNEIF 862 Query: 899 RR 900 Sbjct: 863 EE 864 >UniRef50_A7VJ44 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VJ44_9CLOT Length = 1128 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 73/549 (13%), Positives = 160/549 (29%), Gaps = 55/549 (10%) Query: 334 LLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL 393 L I + E N+ K+PL+ I Q E+ + + Sbjct: 274 LPGTINYRLGENRELFFLERNLFRSPYQKWKQPLER----IHLTATGDAQDEIVFVASTI 329 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 ++ + +DI ++ D++ ++ + +P I +++P E Sbjct: 330 RRLV-REKGYRYKDIAIVAGDLEQ----ASHIYERVMDEYEIPVFIDANACLKANPCAET 384 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 S+L++ F + V L + D++ E + L + + G+R G N Sbjct: 385 IRSVLAVLADDFSYDSVFRFLKAGMT----DLSFEDIELLENYALKRGVR-GYSRWNRA- 438 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 + + T + + + + + + A+ + L Sbjct: 439 --VSENYEKTSPVNIEEIRQAFMK-----------MFGDIRKVFADKKAVTKDYVEALYD 485 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 + + LE + A I ++ + + + Sbjct: 486 FLLQIHMYEKLEARKNELYE------ENRINEGDAYGQIFEKTVRLFDKIAELLGDTKMS 539 Query: 634 LSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 + + + L + V I + R KV+ +NDG+ P+ Sbjct: 540 VKEFYEIVDTGLSDIEVGVVPPTVDRVLIGDITRSRLNHIKVLFFTSVNDGIVPKAPKKG 599 Query: 693 GF------DLMSQ---KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF 743 D++S + D+ +++ L LYISY S Sbjct: 600 RILSDRDRDILSDCGLELAPSDKQNSYIEQFYIYTILTKPSDYLYISYHKLSASL-ESMR 658 Query: 744 PSVLVQELIDYIGQSHYLPGDEALNCDESEAR-VKAHLTCLHTRMPFDPQNYQPGERQSY 802 PS L+ + D A ++ R ++ L + + + + Sbjct: 659 PSYLLGRISSIFPSLQAEEYDAASCMPDTVNRSLRRILRAEDSEDAESRILTRILTEKGF 718 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQV 855 A E A G+ + + LP + + L+ + F + L++ Sbjct: 719 AGEL--TAIYKGRTYRNVAEQLPPETIALLYGRYLHASVSKLELYARCGFAYFLKYGLRL 776 Query: 856 NFRTEDSEI 864 R Sbjct: 777 KEREMYQVD 785 >UniRef50_Q1Q1J4 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1J4_9BACT Length = 1099 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 110/711 (15%), Positives = 225/711 (31%), Gaps = 108/711 (15%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS----WG 304 DI+ + +++L T + +A + +LA Sbjct: 151 ADIQKLSDISRLFTLFQNTLNASGISHDSNLYRSAAKHAADSEYLRKFKYILAYGFYDLT 210 Query: 305 KLGRDYIY---------LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 + +D+ L + + + +V ++ L I DI +L + G + Sbjct: 211 GVEQDFFSEIFRYYPTILFLPYKKNHAVFTYVKHFYESFLLGIARDIEDLPPDDLQGFSY 270 Query: 356 EEFSRSDNKR-------PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 + S+ K P P +++ E+ V+ +L ++ + DI Sbjct: 271 LMDADSETKTSLHGESMPDAPSLDNLSIINVSGKHDEIWVIAKEILKLI--NKGYVFGDI 328 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 ++ ++ Y IQ VF + +P+ D+ + +P+ LL L F Sbjct: 329 GIVARELGQYLNIIQEVF----QENAIPFTTLDKEPIEKYPLFTMIKQLLLLDRENFYRP 384 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 V+ +L+ P F+I L+ D + + L + + G+ Sbjct: 385 MVIDILESPY----FNIPVPELK---------------DVLSRQNLWDIISRTNGIHSGI 425 Query: 529 TRML-----LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 L L AM + +LP++ + + + L +++ L+ L ++ Sbjct: 426 RCWLSKLEQLKNAMAEPAE--EDILPHNI--NISCDQIESLKNIVQLLSNDLLSLQEKAT 481 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA------IIAEGLGAQYGDAVPLSLL 637 + + L+ + +E + + + + + Sbjct: 482 WSQMCQKTKLFLDKYIHIPSEDIDQEIIKRDIFIKERIFCLFDTLSILDRIDKEITYDQF 541 Query: 638 RDELAQRLDQERISQRFLAG-PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 D QE I V + M R IPF+++ L+G+N+ +PR + F Sbjct: 542 ADTFINACKQEGIQAGTANNKGVRVMNAMSARGIPFRILFLVGLNEKEFPRAIFEEPF-- 599 Query: 697 MSQKPK-----------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 + + +++R LF L +AQ+++Y+ Y RS + + PS Sbjct: 600 LPDHTRRILSEALGNHIPEKLRGFEEERLLFYFLLNAAQERIYLLY-ERSDEAGKPKTPS 658 Query: 746 VLVQELIDYIGQSHYLPGDEALNC----------------DESEARVKAHLTCLHTRMPF 789 + +++ I H D+ ++ Sbjct: 659 HYIMDILQNIKGIHTRNEDKENKSPVKMNVPRSIKNKLCKEDISLLTPNEAVIRMVLEHI 718 Query: 790 DPQ---NYQPGERQSYAREWLPA---------ASQAGKAHSEFVQPLPFTLPETVPLETL 837 DP N G +Y R S S+ + + L Sbjct: 719 DPSCCINAIGGNLAAYTRSKSALQAIECFSPYLSAYDGIVSDGEHWYKNRVQKGFNPTML 778 Query: 838 QRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 + F A P + F + LQ+ E E L L I ++L+ L Sbjct: 779 ETFGACPFQFFMREILQL---EPLEEPEKGETISLPKL--GTIYHEILDTL 824 >UniRef50_C4G8W0 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G8W0_9FIRM Length = 1199 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 136/1019 (13%), Positives = 291/1019 (28%), Gaps = 144/1019 (14%) Query: 17 MEFIVERERLDDPFEPEMILVQ---STGMAQWLQMTLSQK-FGIAANIDFPLPASFIWDM 72 + + R ++P +++V + + L +++ I N+D + + Sbjct: 14 LFDQILRRAKEEPKRHFIVIVPEQFTMSTQREL---VARSSQKIIMNVDVLSFNRLAYRV 70 Query: 73 FVRV---LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSS 129 F L ++ +++ K + ++ ++ T+LR + ++ L + Sbjct: 71 FEETGTKLDDVLEDT--GKNLLLRRVAQE-----HEKELTVLRGNVRRPGYIDEIKSLLT 123 Query: 130 KAADLFDQYLV---YRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHR 186 + A QY + D + G E + +++A E Sbjct: 124 EMA----QYGIGPKEFADLAELTDMGSSFRRKAEDLS---VIYRAFREAIEGRYITAE-- 174 Query: 187 ANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQ---ALGKHIEIHLLFTNP 243 + +R + ++ + + + I G + P+ Q L L I + L Sbjct: 175 -EVLERLAQLMDQSALIKDAV---IAIDGFTGFTPIQKQVLAQMMRLASSIYVTLTM--- 227 Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASW 303 D + + L + E E + EN + GNP AS Sbjct: 228 ------DPGERITGSHLDYELFAMTKEMGEGLVRLAGENRCPIEEPVCL--TGNPRFASA 279 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 L L + + Q+D + A + + + S Sbjct: 280 PMLAYLEANLFRPKSRPYGKEL-SGLDGKETAGCSQADT---KETASCAQSDAKENASRA 335 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 + DP I S + E+ + + + D RD ++ A++ Y+ + Sbjct: 336 QGESDPKMRQIRLGRAASFRDELAFAGEEIRKKI-RDQGGRYRDFAIVCANLSDYADYAG 394 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 +F LPY + + HP++E +S LSL F E ++ L + Sbjct: 395 QIFDKMD----LPYYLDQEQDILFHPLVEFILSSLSLFTEDFSEESLMQQLRSGL----A 446 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 I L ++++ IR G + ++ G Sbjct: 447 GIDPSDADLLERYIHARRIR-GFARYRRPFSGRVRNFSQEQMLRVEQLRKGIVA-DISDF 504 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 QS+ + + A + + + E LE CR D Sbjct: 505 RQSMCEENAVTRDRAL----------AIYAYLQAHEVEEKLEARANACRA------EGDE 548 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNIC 662 + + + + + + + LS L L + + V I Sbjct: 549 IAASIHSRVFGLVMETLEKMSDLLGEEKMSLSDFAQLLEAGLRAISVGTVPPSFDSVVIG 608 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK---------RGDRSRRDDDR 713 L R K + +LG +D PR G +++ K GDR R R Sbjct: 609 DLERTRLEHIKTLYVLGASDAAIPRSAESSGLFSQAEREKLREKQIDLAPGDRERAFMQR 668 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 + AL ++L +SY S D S S L+ + + + Sbjct: 669 FYLYLALTKPSEQLVVSYARLS-SDGSALRESYLIGLICRLFPGLGVENLEGRADLQRLV 727 Query: 774 ARVKAHLTCLHTRMPFDPQN---------------YQPGERQSYAREWLPAASQAGKAHS 818 A + + + + E L + + + Sbjct: 728 TAPAALDYLPDALRSLSEKEPSREEGQLACAIYEVLKEDKNFTDRAEELFKTAFSEQGQD 787 Query: 819 EFVQPLPFTLPETV---PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 + L + + + L++F + + ++ E P+ + + L Sbjct: 788 RLSERLIKRVSGDLIQGSVSRLEQFCRCAYAYYLRYG----LLLQEEEEPEIDFLDMGNL 843 Query: 876 SRYQI-------NQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQE----- 923 + ++ L+ D + E+ + + Sbjct: 844 HHQTLEFFSKRMKERKLSWKEISDSDAEALLEEAFRNAVGQMERAELLENRRQAQVIRRM 903 Query: 924 -------MQQLADRVIACRQPGQSMEIDL--------------ACNGVQITGWLPQVQP 961 + L ++V + E+ +Q++G + +V Sbjct: 904 KSVLRCSIWALREQVTRGDFVPEEFEMSFGPRDQLSSMRFQLGEREKLQLSGKIDRVDC 962 >UniRef50_C5RAZ7 ATP-dependent deoxyribonuclease, subunit B n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAZ7_WEIPA Length = 1188 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 87/572 (15%), Positives = 171/572 (29%), Gaps = 89/572 (15%) Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 D +I H+ +EVE + + + RD ++M D+ Y + AVF Sbjct: 317 ADDAIEIWQTHTRYQEVEQMARLIRQEVAAGKH-RYRDYLLMTRDLGQYENIMPAVFARY 375 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI---T 486 +P + R +HP++ LL L + + DV+ LL +L + Sbjct: 376 E----IPIFMDLDRPMSAHPLVAFLDKLLHLAPA-YTMTDVMGLLKTELLIPDGVLLADY 430 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF-GLTRML-----LGYAMESA 540 E L +V I G + + + R+ L + Sbjct: 431 REALAETENYVLAKNIA-GWQWTDKTPWQYDRQALTSDDEVTRERVASKDAQLAMIHDQI 489 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLL------MQLNIWRR------GLAQERPLEEWL 588 L + + + E+ L + + +L WR L + E+ Sbjct: 490 SQTVAPFLHHLQQAPTAREMARELYNFITQIGIQKRLINWRDNAIEQGDLWSAQQPEQVW 549 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 V +L+ F + +++ + A A + + + + Sbjct: 550 RVFISILDDFVQVFDSEVMTLEVLQDVFTAAFDSAKYAGIPATMDQVHISESGIVQRTGY 609 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 F A N+ + +++I ++DG L ++ ++ + Sbjct: 610 ETVIVFGATNHNLPAVTRIKAI---------LHDGDRAILQPALPDNVFLKETSE---QQ 657 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 + L A++ A Q+L +Y S D S + PS V + L Sbjct: 658 MAQESLLMYRAMMVADQRLIWTY-ATSDGDGS-QQPSTYVTRIQKQFQL--------PLV 707 Query: 769 CDESEARVKAHLTCLHTRMPFDP------QNYQPGERQSYARE----WLPAASQAGKAHS 818 ++ +H + P N Q +R + + W Q K Sbjct: 708 QFDALPDPMSHHVDDYVGTPTSTIAQIIIANRQAKQRGTVDGQLSAAWRNLIQQVQKIAP 767 Query: 819 EFVQPL-----PFTLPETV---------------PLETLQRFWAHPVRAFFQMRLQVNFR 858 +Q L PE + + L+ + +P F Q L++ R Sbjct: 768 YQLQHLLGSLHYQNEPEKLQPVLVNTLFGHDLKASISRLESYSRNPYEFFLQYGLRLQER 827 Query: 859 TEDSEIPDTEPFILEGLSRYQINQQLLNALVE 890 L + + +L L + Sbjct: 828 QV---------LQLTPAEKGTLMHAMLEQLFQ 850 >UniRef50_Q04GY8 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Oenococcus oeni RepID=ADDB_OENOB Length = 1161 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 85/604 (14%), Positives = 187/604 (30%), Gaps = 80/604 (13%) Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSI---TFHVCHSPQREVEVLHDRLLAMLEED 400 + + + +N E+ R + S V + E++ + + L ++ Sbjct: 276 NIRPLSESQLNFEQSWRELETQGFTSQKRSFPQTKIVVSSDQEHEIDFVARSIRQRLVDN 335 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 P L +DI+V+ +D Y I +F LPY + HP+ +LL Sbjct: 336 PKLRAKDILVLAQRLDGYKNIIPKIFDRYD----LPYFLDKDTRMSDHPLASLAENLLG- 390 Query: 461 PDSRFVSEDVLALLDVPVLAARFDIT-EEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + F E ++ + +L+ + + + L YL ++ + Sbjct: 391 SSNEFAYERIMKIFRTGLLSWQLEDNFQTALDYLENYLLANN-----------------P 433 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE----LVGHLASLLMQLNIWR 575 + WR +++ + Q + + LI ++ L + Sbjct: 434 KEKNWRQEEFQLI---QISDEQDLNDDHKIDRQINALINRMRLFIIKILDDFQEKFAKVE 490 Query: 576 RGLAQERPLEEWL---PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 + L WL V + +LN D + L+ E Sbjct: 491 NYHQAVKTLYNWLTDQQVDQVLLNQANDGDDRGQQTWKLLLSTL----DEVDQLIGDKKY 546 Query: 633 PLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 L S + + + ++ FK + + +D P Q Sbjct: 547 SQKDFLQILKDGFAAASFSGIPASLDQITVSESGIVQRNDFKALYFIDASDASLPAQTNS 606 Query: 692 LGFDLMSQKPKRGD---------------RSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 + + D R + + F +++SA + SY + Sbjct: 607 SSLIDDFDRLQLIDDFSKAQKPYYLQDTSRQEMTAENFRFYSSVLSATDSVTFSYSKLRL 666 Query: 737 QDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL--------TCLHTRMP 788 D + S ++ L + L ++ + +S+A + +L T Sbjct: 667 -DGKQNELSPYLRRL--SLKNVSDLKIEKIPDLPQSQADLVDYLGTANSSAAILSQTAQN 723 Query: 789 FDPQNYQPG-----ERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE--TVPLETLQRFW 841 F +R Y + L A + + + + E + + +++++ Sbjct: 724 FGEDFIDGLTDLLIKRNPYFQRILQALHYNNQPVTLRPELIKKLFGEDLRLSISQIEKYY 783 Query: 842 AHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD-DAERLFRR 900 ++P F Q L++ R + + L G + I +Q++N L+ + D L + Sbjct: 784 SNPYEYFLQYGLRLKKRNQFTVDA-----ALSGTYYHSIFEQVINRLIGKRTDFHDLSDQ 838 Query: 901 FRAA 904 Sbjct: 839 ELKK 842 >UniRef50_Q38X70 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=ADDB_LACSS Length = 1186 Score = 207 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 93/704 (13%), Positives = 214/704 (30%), Gaps = 74/704 (10%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 L + + GR Y L + +D D+ + + L+ V+ + Sbjct: 247 LNFFFQAGRTYYN-LYQQARLNHVPVMMDQMADS--QRLTPALAALDQFWVSSESPGNRK 303 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 S P+ D + + E+ + + +++ RD +++ + Y Sbjct: 304 LS----PVPVADH-LHVVAAENRYAELRYVAREIRRLVQTGH-YRYRDFLILTRHLAPYQ 357 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 I + +PY + +HP++ LL + + EDV+ALL +L Sbjct: 358 TMIAPILTEYE----IPYFCDLPQTMAAHPLVSLLEKLLDVNLHFYRYEDVMALLKTELL 413 Query: 480 AAR-FDITE--EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 + I E L + ++G G D + + + +++ G Sbjct: 414 IPKGMSIAEFRADLDLCENLILKNGYE-GKDW--LNDFDWQFYRFGSYQEGTRTTQDEAL 470 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 E G + V + ++ L + +R L W + + Sbjct: 471 TERINGIRRYVQATLPPFYRALKAAKTGRQVVQVLYQFLIDHGVDRQLLHWRD--QALAA 528 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD--AVPLSLLRDELAQRLDQERISQRF 654 + E + Q + + + L+ + L+ + +Q Sbjct: 529 NQVAQAGQPEQTWSTFMQMLDEYVTLLGDVSFEEDNTEQLNEFKQLLSAGFAAAQYAQIP 588 Query: 655 LA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS------ 707 V + +++ ++ ++G D V P Q+ + + D Sbjct: 589 STLDQVVLSESGMVQTKKRQITFMIGSTDQVMPDQIENTALLTDQDRQRLLDNEGQVTPL 648 Query: 708 -------RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 + + + YL A +S+Q +Y +Y + + + S V+ + ++ + Sbjct: 649 LNESSVGKMNAEPYLNYLAFLSSQTTVYFTYPLGNG-EGTAFKISPYVERIRNHFDLTIQ 707 Query: 761 -LPGDEALNCDESEARVKAHLTCLH---TRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 + +++L E+ L +R + Q P + + R A Sbjct: 708 KIAAEQSLQSTETPQGSWRSLLSDLIQVSRQAQENQTLIPEQWLTTYRLLQQAPQSQFLT 767 Query: 817 HSEFVQPLPFTLPETV---------------PLETLQRFWAHPVRAFFQMRLQVNFRTED 861 F PE + + L+ F+ + F + L++ R Sbjct: 768 TQLFQSLNYRNEPERLTPEIVTGLYGNEIHTSISKLEEFYQNQYAYFLKYGLKLQERPVF 827 Query: 862 SEIP-DTEPFILEGLSRY-------QINQQLLNALVEQDDAERLFRRFRAAGDL------ 907 P +T F E + R+ QI L+ + + + Sbjct: 828 ELTPANTGNFYHEVMDRFIKLIQGQQIALPELDDQQIDKLVSEVLAKTYEQPEFKILNKT 887 Query: 908 -PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGV 950 G + +T + L ++ + + + ++ V Sbjct: 888 ARMGYIRQQLMQTVKRVSLALRNQ--SLSTNLRPLATEVLFGQV 929 >UniRef50_C0EHH2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHH2_9CLOT Length = 1119 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 95/705 (13%), Positives = 207/705 (29%), Gaps = 111/705 (15%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSS---ITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 ENR + R+ + ++P + + + + EV+ + + +++ Sbjct: 263 ENRLFVHPELAHLERNILRNRIEPYQGTCEHVKVLLAPNEYGEVDAVLSEVWELVQRH-G 321 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 R+I ++ D++SY Q V SA +PY + + + + P++ SLL+ D Sbjct: 322 YRFREIALITRDLESY----QGVLESALRKYGIPYFMDETVSVEHDPLIRFASSLLAAAD 377 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 VLALL + RF +T + Y ++ I +L P T Sbjct: 378 GGKDISPVLALLKCGLT--RFGLT--QISYFENYLYTWNI-------TKDQLNQPFTHNP 426 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM-------QLNIWR 575 G+ + + Q DE +AE++ L L Sbjct: 427 ----------RGFVDRETEQDGQVTALADEVRAAVAEVISLLRGAEQTARGYGSALFEAL 476 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 L L + + F E + I+ + + L Sbjct: 477 HRLGVADVLNQRVERLNG--EEKFPEAEEQAR----LWDVLIDILEVLAHSTGEVRLTLR 530 Query: 636 LLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 R+ + + V I + + V + G +G++P G Sbjct: 531 RYRELFDLSAKGYDLGSIPQSLDAVMIGSAERTIIGNSRAVFVFGAGEGIFPLSPQFDGV 590 Query: 695 DLMSQKPKRGDR---------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 S + + R ++R+ ++L S ++ L +S I S +PS Sbjct: 591 FTDSDREELKKLGVELSKPIGDRILEERFSAYKSLSSPREHLVVSARLADIA-GSPLYPS 649 Query: 746 VLVQELIDYIGQSHYL------PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER 799 ++ ++ G D + + ++ H + + + E Sbjct: 650 EVITQITKMFGSGVVTYTADLGLADFCRTKESAFLQLAFHYRSRDGQAEALRRYFAQDEE 709 Query: 800 QSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLE--TLQRFWAHPVRAFFQMRLQVNF 857 L AA+Q G + + + ++ ++ F ++ Sbjct: 710 YGDRLRRLDAAAQTGGFRLYDRKNAERLFGRQLAVSPTQVENYYKCGFLFFCANGMKAYP 769 Query: 858 RTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDA--ERLFRRFRAAGDLPYGAFGE- 914 R + + L LS ++ +L L+ +A L G + Sbjct: 770 RGKAN---------LNPLSLGKVTHHVLEQLLSTPSFYQMEYEEIAQAVEQLLDGYIDQF 820 Query: 915 ---------IFWETQCQEMQQLADRVIACRQP-----GQSMEIDLACN------------ 948 F + + L + ++ Q +L Sbjct: 821 MGGKQDKTARFLQLYRNTARSLVELARNIQKEFAHCRFQPAAFELEIGDKGAVQPITLPL 880 Query: 949 ----GVQITGWLPQVQPD--------GLLRWRPSLLSVAQGMQLW 981 V++ G + +V ++ ++ +++ Sbjct: 881 SDGCSVKLIGEIDRVDSYQKDGKTYIRVVDYKSGAGRTFDLSEIY 925 >UniRef50_B1MZM3 ATP-dependent helicase/deoxyribonuclease subunit B n=3 Tax=Leuconostoc RepID=ADDB_LEUCK Length = 1171 Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 82/671 (12%), Positives = 197/671 (29%), Gaps = 113/671 (16%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 V + E++ + R+ +L P L RDI+++ D+ Y+ I V LP Sbjct: 322 FVAENTMVEIQEVARRIRQLLVAQPDLRLRDILILARDLTPYTGHIPEVMQQFD----LP 377 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD---ITEEGLRYL 493 Y + + +HP++E ++LL RF + V+A+L +L D + E + Sbjct: 378 YFLDTDQKMTNHPLVELLLNLLRPAKERFQYQQVMAILKTGLLRPYTDGSLVPEGDFFDI 437 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 +++ L + TWR L E E V+ D++ Sbjct: 438 VSYLD-------------NYLYANQPFERTWRDLDHPFTLFTVSEDEDDEDARVVLDDKT 484 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA---------- 603 E + + + ++ L Q + + + + L + + +A Sbjct: 485 VNRRIETLRRFV--IDAFDSLQQQLNQAQTMRQAATLIILWLEKYHVTEAILSQRDTLLA 542 Query: 604 ----ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GP 658 + + + + + + L + L + S Sbjct: 543 AGELSRSREGEEVWEMMTQTLDDIVAIDGDERFELEKFKAILVAGFEGATFSGIPNNLDQ 602 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQ---------------LAPLGFDLMSQKPKR 703 + I ++S ++ + +G P Q L + + + Sbjct: 603 LTISEAGIVQSNDYQYLFFIGGTRNNLPAQLKSRALINDAERLIVQPALQENSTPKYLQN 662 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 + + ++ LF AL +A + + +SY S + L+D + + Sbjct: 663 TAQQQMAEENLLFYGALTAATKNIVLSYPALDAG-GQISDMSPFFKRLVD----AFNITV 717 Query: 764 DEALNCDESEARVKAHLT--CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFV 821 ++ + + + T + +Y + + Sbjct: 718 NKVTATPATSQALLKYYVGSVRSTLGELVKIAASQQQTSAYQALRNTINQSEPERLERVL 777 Query: 822 QPLPFT----------------LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 + + + L+ ++ +P+ F Q L + R + Sbjct: 778 SAPNYKNQTETLKPELVQALFGETLNMSISQLESYYNNPLAYFLQYGLALKERLTNRLNV 837 Query: 866 DT------------------EPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDL 907 + L +S+ + QQL+ + + A+ ++ + G + Sbjct: 838 AQTGTLYHAVFEGVVQQLIIQQLSLRDISQKAL-QQLVADNMAEITAQPAYQMLQETGKM 896 Query: 908 PYGAFGEIFWETQCQEMQQLADRV----------------IACRQPGQSMEIDLACNGVQ 951 + + + + R RQ ++ + V Sbjct: 897 ---RATQHYLAKVSEILAVNMQRAARVNHAQPKAVERLFGFPNRQSLPALVVSTPQATVH 953 Query: 952 ITGWLPQVQPD 962 + G + ++ Sbjct: 954 LRGKIDRLDSQ 964 >UniRef50_B5E4P4 ATP-dependent helicase/deoxyribonuclease subunit B n=32 Tax=Streptococcus RepID=ADDB_STRP4 Length = 1091 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 86/610 (14%), Positives = 200/610 (32%), Gaps = 84/610 (13%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS-ITFHVCHSPQR 384 + D + + D + +R + + S+ +D D + C + + Sbjct: 251 YQTPAQDCSQTHEKMDSFDKASRLLESS----YDFSELALDVDEKDRENLQIWSCLTQKE 306 Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E+E++ + L E+ L+ + +++ D+ SY ++ +F +P+ + A Sbjct: 307 ELELVARSIRQKLHENSDLSYKHFRILLGDVASYQLSLKTIFDQY----QIPFYLGRSEA 362 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 HP+ + S+L+L RF ED++ LL + D+++ + Q++ GI Sbjct: 363 MAHHPLTQFVESILALKRYRFRQEDLINLLRTDLYT---DLSQSDIDAFEQYIRYLGI-- 417 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 + + + T H +F L R+ +VL + L Sbjct: 418 ----NGLPAFQQIFTKSHHGKFNLERL--------------NVLRLRILAPLETLFASRK 459 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 L W L + +D+ + E +A + + + ++ + Sbjct: 460 QKAENLLQKWSVFLKEGAV----TKQLQDLTTTLEAVEQERQAE---VWKAFCHVLEQFA 512 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDG 683 G V L L + + V + + + + V +G+ Sbjct: 513 TVFAGSQVSLEDFLALLHSGMSLSQYRTIPATVDTVLVQSYDLIAPLTADFVYAIGLTQD 572 Query: 684 VYPRQLAPLGFDLMSQKPKRGDRSRRDD--------------DRYLFLEALISAQQKLYI 729 P+ L++ + ++ ++ +RY L + SA+++L++ Sbjct: 573 NLPKISQNTS--LLTDEERQNLNQATEEGVQLLIASSENLKKNRYTMLSLVNSARKQLFL 630 Query: 730 SYIGRSIQDNSERFPSVLVQELIDY-IGQSHYLPGDEALNCDE--SEARVKAHLTCLHT- 785 S S+ + SE S +QELI + + + L+ ++ S + + L H Sbjct: 631 S--APSLFNESESKESAYLQELIHFGFRRREKRMNHKGLSKEDMGSYHSLLSSLVAYHQQ 688 Query: 786 ------------RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL-PFTLPETV 832 + + Q +P + + + +Q L P + Sbjct: 689 GEMSDTEQDLTFVKVLSRVIGKKLDLQGLENPAIPTSPSSKTLAKDTLQALYPAKQEFYL 748 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD 892 L F+ + F + L + + S ++ ++ Sbjct: 749 STSGLTEFYRNEYSYFLRYVLGLQEELR---------LRPDARSHGNFLHRIFERALQLP 799 Query: 893 DAERLFRRFR 902 + + +R Sbjct: 800 NEDSFDQRLE 809 >UniRef50_A8YVK1 ATP-dependent helicase/deoxyribonuclease subunit B n=27 Tax=Lactobacillus RepID=ADDB_LACH4 Length = 1160 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 80/572 (13%), Positives = 168/572 (29%), Gaps = 68/572 (11%) Query: 333 NLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS--SITFHVCHSPQREVEVLH 390 + L D + E + E S + +D + S E + Sbjct: 257 SFLQERDMDYVASEFPIPSEPTPREILNSLWTETVSKVDELKQVQLVKADSRYAEAYFVA 316 Query: 391 DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 + + + RD +++ D+ Y ++ + +P+ ++ + HP+ Sbjct: 317 RTIYQQVALN-NYRYRDFLILAPDLKEYETYLTPILRQN----NIPFFNDLQQEMKYHPL 371 Query: 451 LEAFISLL---SLPDSRFVSEDVLALLDVPVLAARFDITEE----GLRYLRQWVNESGIR 503 + +L L ++ F ++ +LA+L +L + E + L +V GI Sbjct: 372 VVLIENLFNLRDLKENPFQTQSMLAILKTHLLIPSWYKEEAEYIHDVDELENFVLAHGIN 431 Query: 504 WGIDDDNVRELELPA----TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 + + + + R L GY ++ + + E + Sbjct: 432 HNLWKKHFADFVSAEVIRLDKIDEEVAKIDR-LRGYLVDKVTNLFTKL----EQEKDSQK 486 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 + L LE+W + D + + + Sbjct: 487 ALTIFFDFL-------TKNGIAERLEQWRDAANN------AGDLQQAQQPEQLWDLLIQL 533 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLL 678 + + L + L + L + SQ VN+ + +++ +K V ++ Sbjct: 534 LKDYLAIN-PEKFDLDEFFNMLISAFKEATFSQIPSTLDAVNLSEMGMVQTSGYKQVFII 592 Query: 679 GMNDGVYPRQLAPLGF----------DLMSQKPKRGDRSRR--DDDRYLFLEALISAQQK 726 G G P GF D R D Y F +L AQ + Sbjct: 593 GATSGNLPSIEKKPGFLTTENLNQLQSSFESDAYLEDNQRLNNLDQNYQFGLSLALAQDR 652 Query: 727 LYISYIGRSIQDNSERFPSVLVQELIDYIGQSH-----YLPGDEALNCDESEARVKAHLT 781 +YISY + N + PS+ Q L DY E L+ + +L Sbjct: 653 VYISYPVLNA-SNEKLDPSIYYQRLQDYGAPEFSQHDLPEKMQELLSFITNPDASLGYLA 711 Query: 782 CLHT---------RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV 832 +++ + + + + E + + Sbjct: 712 YINSNTSDEAIDELLKITQKYLPQKVKAVLDASDFD---NQPEDIGEDLAAELYGKNLYS 768 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 + L+ F+ + F L++ R E+ Sbjct: 769 SVSQLETFYENSYEYFLTYGLKLRRRLENEFD 800 >UniRef50_Q1WRR9 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Lactobacillus salivarius RepID=ADDB_LACS1 Length = 1193 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 88/682 (12%), Positives = 196/682 (28%), Gaps = 86/682 (12%) Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 YLL ++ DV P Q +E +E + Sbjct: 265 TYYLLYQQARKAQVKILNDVYP-------QELRVETPELQSLAKYWKESTDLKPINVEKI 317 Query: 370 LD-SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 D ++ + E++ + R+ M+ D +++ D++ Y I+ +F Sbjct: 318 GDNHNLQVIKADTRMTEIKEIATRIKQMVAL-KDYRYADFLLLTPDLNKYRNIIEPIFND 376 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR-----F 483 +P + + HP++E +L ++ + D++ LL +L + Sbjct: 377 Y----KVPIFVDLAKKMIDHPLVELLTALFNVKARHYRYVDMMRLLKTELLIPKTEYGYL 432 Query: 484 DIT--EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 I + L + + G G + G + FG + + Sbjct: 433 GIKQFRQDLDLTENLILKFGFE-GSQWLRKDDWVYYRFG--SSDFGTQTDVQEKITKQVN 489 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 + + + + L + L W + + Sbjct: 490 VIRRYIKEILPPFFKQLDEAENGKEAAQILMNFLIINGVPEQLINWRNKALEQGDMVMAD 549 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVN 660 E + + A++ E + + + L + Q V Sbjct: 550 RPE------QVWNLFCALMDEYVDTLGDLSFKEEDFLNLLQTGFEGATYRQVPSTLDQVI 603 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL----- 715 I + KV + G D V P ++ L++ + + DD++YL Sbjct: 604 ISETTATQMNDRKVTFIFGATDLVMPNRIQNTM--LLTDMDRELVQGTLDDEKYLSDTAE 661 Query: 716 ---------FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY------ 760 A ++ +++LY SY + ++ R S V ++ Y Sbjct: 662 GRMAAEPFMNYLAFMTPKERLYFSYPVAGVNEDGLRM-SPYVNRIMKQFDLPLYEANGEP 720 Query: 761 -LPGDEALNCDESEARVKAHLT--------CLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 L + L ++ ++L YQ + + R Sbjct: 721 TLEDKKVLKFVATKRTALSNLIGVARQAKGQKQPLPVMWRYIYQKLQEDATYRRLTRKLM 780 Query: 812 QAGKAHSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 AG +S + L E + + + F+ + F + L++ R Sbjct: 781 -AGIEYSNIPERLKTEYAEKLYGKTLNTSVSKFEEFFKNHYAFFLKYGLKLKERDV---- 835 Query: 865 PDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEM 924 F L + + L+ L++ +++ + + + M Sbjct: 836 -----FELSPANTGEFYHMALDKLLKTLKQDKVSITDINKSQF------DAYLQQVLGGM 884 Query: 925 QQLAD-RVIACRQPGQSMEIDL 945 +QL +++ Q + L Sbjct: 885 EQLPQFQILQSSNRMQFILKQL 906 >UniRef50_Q9RNX7 RecC1001 (Fragment) n=71 Tax=Bacteria RepID=Q9RNX7_ECOLX Length = 200 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 196/201 (97%), Positives = 198/201 (98%), Gaps = 1/201 (0%) Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ Sbjct: 1 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 60 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD+ +S RFLAGPVNICTLMPMRSIPFKV Sbjct: 61 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDK-NVSARFLAGPVNICTLMPMRSIPFKV 119 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR Sbjct: 120 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 179 Query: 735 SIQDNSERFPSVLVQELIDYI 755 SIQDNSERFPSVLVQELIDYI Sbjct: 180 SIQDNSERFPSVLVQELIDYI 200 >UniRef50_C8PAK3 ATP-dependent exonuclease subunit B n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PAK3_9LACO Length = 1157 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 71/576 (12%), Positives = 180/576 (31%), Gaps = 69/576 (11%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + S E+ + + + + +D +V+ ++ Y ++ +F Sbjct: 302 VHLIKADSRYAEINFVAQTIYQQVVFNH-YRYKDFLVLAPNLSEYETYLTPIFSQN---- 356 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE----EG 489 + ++ + HP++ ++ + D F ++D++ +L +L + + Sbjct: 357 NISMFNDLQKQMKFHPLVVMIENIADINDMGFKTQDIITILKTRLLIPEWYTDDIKFIAD 416 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + L +V I + + + L E + + Sbjct: 417 VDLLENFVLAHNINHQLWKKSFYDFVDNNISH-----------LDQINEKVEKLDKLRQF 465 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQER---PLEEWLPVCRDMLNAFFLPDAETE 606 E+ + + L ++ + ++ L + + LE+W + D + Sbjct: 466 IIENIDNLITQLHKLTNVQEAVTLFWNFLLKNKINKKLEKWRNTAIN------NGDLQLA 519 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLM 665 I ++ + + + D L + SQ V + + Sbjct: 520 QQPEQIWALLNKLLKDYVLIA--EEFNTENFFDILISGFSEANFSQIPSVLDAVTVSEIG 577 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFD----------LMSQKPKRGDRSRR---DDD 712 +++ FK V ++G + P+ GF ++ + + + ++ D Sbjct: 578 MVQNNSFKQVFIIGAVNNSLPKIQNKPGFLNIENINELNNSIADEQQYIENNQEVNNLDQ 637 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI------DYIGQSHYLPGDEA 766 Y F + L A +YISY ++ N + S+ Q++ +Y+ + Sbjct: 638 TYQFGDVLSLASDGVYISYPIINV-SNEKMEASIFYQDIKNTLNLTEYVQHDLPENQQQL 696 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 L+ + ++ L + D N S QA ++ V P Sbjct: 697 LSFITTPQASLGYIVYLKNKTNDDISNLLALT-PSNQALLFDNVIQASSFKNKPVNLTPA 755 Query: 827 TLPE------TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE---------IPDTEPFI 871 E + + L+ F+A+ F L ++ R E+ + Sbjct: 756 LAQELYGNNINISISQLETFYANSYEYFLTYGLHLHKRFENELTNIQSGNYYHETMDRL- 814 Query: 872 LEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDL 907 ++ L +++++ L + + G Sbjct: 815 VKYLKQHKLDFAELTKEKISVILANIQDELKTKGSY 850 >UniRef50_Q3AA34 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Carboxydothermus hydrogenoformans RepID=ADDB_CARHZ Length = 1090 Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats. Identities = 84/619 (13%), Positives = 179/619 (28%), Gaps = 111/619 (17%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 RA +++ + P +++ +P E+E ++ L + Sbjct: 259 RYRASELLHLAQNYYPLLPDPYSGSLENLSLIAAANPLEEMEKAAR-IIRYLAKFKGYKL 317 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 DI+V++ + Y I+ VF LP + A H + +L F Sbjct: 318 SDILVLIPEDGYYISNIKTVFNEYG----LPVYVDKGLAFDHHGLYFLLKGVL----GEF 369 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG-QHTW 524 E + L +L ++T + + L ++ G+ G E P + +W Sbjct: 370 NREAAINCLKSGLL----NLTADEVFALENYLLSRGLD-GEKLVLKEAWEDPNSSYWESW 424 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 G ++ + +LP L+ L + R + Sbjct: 425 EKGFGEII----------SFSQILP----------LINTYREFSQSLKQLLLKIGVPRRI 464 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 + Q + ++ E + + + +EL Sbjct: 465 SD--------------------ENGERFWQAFTNLLTEIEEVFGAERLNPTTFAEELLAY 504 Query: 645 LDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK- 702 L + + V + + V +LG +G +P P + +++ + Sbjct: 505 LAKLSLKTIPKGLDQVRAGGSKRYWTGEARAVIILGAVEGKFPS--PPAAGLIFTEEERA 562 Query: 703 ----------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 R R +D + AL A++++Y+SY S+ P++LV L Sbjct: 563 KLKKVGLELSPLIRQRLKEDNFHVFLALTRARERVYVSYPRVSL-TGESFTPALLVDWLK 621 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM-------------PFDPQNYQPGER 799 L +E +E+ + L F+ E Sbjct: 622 KAFPN---LKSEEGSYGNETTPQALTRLLSREMVKVKKNGELPFIAQGAFNALLLSKPEL 678 Query: 800 QSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRT 859 + K ++ F + LP +T+ + L+ +++ P++ F + ++ R Sbjct: 679 ITKIARAFATNPGKIKLNAGFKEFLP---SKTLSVSRLETYYSCPLKYFLKYLIKAEER- 734 Query: 860 EDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET 919 E F E + + + R G + E Sbjct: 735 --------EIFTPEATEIGALLH---------GAVAEIIKTVREKGQ----KLSTLLAED 773 Query: 920 QCQEMQQLADRVIACRQPG 938 + Q + Sbjct: 774 LKTLVYQAFTKAQQEYGEK 792 >UniRef50_B2GEY3 ATP-dependent helicase/deoxyribonuclease subunit B n=4 Tax=Bacteria RepID=ADDB_LACF3 Length = 1245 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 103/727 (14%), Positives = 210/727 (28%), Gaps = 118/727 (16%) Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK 364 + + Y LL+ +D + + SD L V + + Sbjct: 275 RSAKQYQDLLNLATQQVGVDVLDPIVLNQPNQRRVSDAL----VGVEEWMEADARFALPD 330 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 R P D + F + E+ + ++ ++ RD +V+ +D Y ++ Sbjct: 331 RLPAPTDQ-VGFFTAPTRVAELNRVATKIRQLVATGQ-YRYRDFLVVTRHLDGYQTMLEP 388 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 +F +P ++R + P+ +L + + DV+ LL +L Sbjct: 389 IFSR----HQIPVFNDNQRPMATSPLATFTAALFKVLKDYYQEADVMELLKTGLLVPE-- 442 Query: 485 ITEEGLR-----------------YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 T E L+ + + G + G + R L + Sbjct: 443 -TPEELQQEGRAKRNPNTFMTAVYRTENYCLKFG-KGGRSWFDERPWRLEGEQPESDALK 500 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 + + + E L +++ EL L L W Sbjct: 501 RQNAQINWVKNYIKDELAPALADLQTATTGRELATKFYQFL-------LDQGVRHQLYSW 553 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP-------LSLLRDE 640 ++ + I Q + ++ E + P ++ D Sbjct: 554 AHQAQE------SGQLTQLRDVQQIWQTFGTLLDEYVTILGDQVAPTEQPGQLVAEFADL 607 Query: 641 LAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 + + R +Q V + ++ KV+ ++G D V P A G L+S Sbjct: 608 MNAGFNAGRYAQIPSTLDQVLVSESGMIQDNQRKVLFIMGATDDVMPEVKASEG--LLSD 665 Query: 700 KPKRGDRSRRDDDR--------------YLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 + + +DD+ +L +++S ++LY+S S D+SE S Sbjct: 666 PDRELLKRGLNDDQFLPISGTDQINNEPFLNYLSMLSVTERLYMSAPLMS-SDDSELTLS 724 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEAR----------VKAHLTCLHTRMPFDPQNYQ 795 ++ L + Q + + V A + + + + Sbjct: 725 PYLKGLARHFNQWDDQNNAPTTDLPDRPNPRASEDDVWSFVAAPAVTMGNLIEVERLSKD 784 Query: 796 PGERQSYAREWLPAAS--------------QAGKAHSEFVQPLPFTLPETV--------- 832 G + + A + A + G+ PL L + Sbjct: 785 TGRKLTSAWRDVARALTRYDEGLTGRLNDIRDGQYAKNEAVPLQPELAARLYTTNRQGQV 844 Query: 833 ------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN 886 + L++F+ +P F + L + R E D +N L Sbjct: 845 TNQLTASISQLEKFYQNPYDYFLRYGLHLKKRDELEVSSDK---------SGTLNHDALA 895 Query: 887 ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLA 946 V+ E + + G E+ + Q M Q + + + + L Sbjct: 896 FFVQSVIDEPDLQLADLVKEEHQGRQAELIDQAFEQAMNQ-QEELRELAANNSRVNLQLQ 954 Query: 947 CNGVQIT 953 IT Sbjct: 955 VAKQLIT 961 >UniRef50_B9EAN7 ATP-dependent nuclease subunit B n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EAN7_MACCJ Length = 1118 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 79/568 (13%), Positives = 165/568 (29%), Gaps = 71/568 (12%) Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 + + S ++ I S E + +++ ++ + Sbjct: 264 NMHVSYRFNDELNMLENSFSREVSISHTEHIHLSQHASVPAEAAHIAHKIMDLVRKGE-- 321 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 +DI+V+ D I +PY + H +E SLL + Sbjct: 322 RFKDIVVLYRDESYVKQLIDVC-----RKHQIPYHTDYKELMIHHKAIELIRSLLDAFKT 376 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGL--RYLRQWVNESGIRWGIDDDNVRELELPA--- 518 E + L ++A F E+ L L + E G+ + D + R+L Sbjct: 377 NMRMEHLFRALKTGLIAHEFKREEDLLLIDMLENVMIERGMYYD-DLIHKRKLFYDEKDV 435 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 Q W LL Y + P+ E ++ G + + + + Sbjct: 436 YEQDQWDA-----LLQYI----DYLLSVIEPFKER--IVNAQSGR--AFASAIYSFMLSI 482 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 + L + + +D + I ++ + + + ++ Sbjct: 483 SLPEYLMQHKDMAKDNGEQYIAL------TFDQILTGLNQVLDDFVLIMDEVTLDYKVMC 536 Query: 639 DELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 D + + + I L + K V + G+ND + PR + L+ Sbjct: 537 DIIDVGFLALEYNAPPQGLDQIQILNLDLAKVENKKYVFVCGVNDDILPRPMKEDA--LI 594 Query: 698 SQKPKR-----GDRS-------RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 + + KR GD D+ ++F A+ AQ +YISY ++ PS Sbjct: 595 TDQEKRMMQEIGDIQLAPTTDVLIQDEWFVFYNAVTHAQHSVYISYSLMNMNQ-EAMRPS 653 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 + L Q H D L+ + + +T H + + + Sbjct: 654 RYLARLER---QLHLEVQDMTLDMNP-----EDCITTYHAGIKHAVSHIEDDTWSDVVAV 705 Query: 806 W---------LPAASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQ 854 + ++ + +T+ + + F + F L+ Sbjct: 706 YETDPQFEHVFKLRHYRNQSEMLAEHEVSRLYGDTIKASVSRFETFNQCAFKHFANHGLR 765 Query: 855 VNFRTEDSEIPDTEPFILEGLSRYQINQ 882 + R F L + + Sbjct: 766 LKERLPYQFQS----FQLGNIFHDALRH 789 >UniRef50_Q88U40 ATP-dependent helicase/deoxyribonuclease subunit B n=3 Tax=Lactobacillus plantarum RepID=ADDB_LACPL Length = 1201 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 92/661 (13%), Positives = 193/661 (29%), Gaps = 112/661 (16%) Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK 364 + GR Y L +++ D+ + + ++ L++ N Sbjct: 256 QSGRLYYR-LYQYARIRQIPVSQDIYAET--PRVAPGLVALDDFWRGQPQAATGYEEPNT 312 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED-----PTLTPRDIIVMVADIDSYS 419 + S Q E+ + + AM+ + RD ++M +D+Y Sbjct: 313 N--------VHLFRTDSRQTELAQVGRMIRAMVAKKHADPADDYHYRDFLIMTRHLDAYQ 364 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + F +PY + +R+ HP++E +L + ++ DV+ +L +L Sbjct: 365 TMLAPTFHELE----IPYFVDLQRSMADHPLVELINALFDIDAQQYQYRDVMRVLKTELL 420 Query: 480 AARFDITEEG-------LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 + + ++ +SG G + + + Sbjct: 421 MPNINGQPMDRQAYRQAVDLTENFILKSGYH-GQRWVQREDWQYFQ------------LT 467 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHL----------ASLLMQLNIWRRGLAQER 582 G A + + +AE + + + L + Sbjct: 468 EGDAGVETDQNAEISRQINLIHHFVAETLPPFFKKMRQAPDGKAAVTLLVNFLTSQGVTD 527 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 L W A D A Q + ++ E + + ++ L Sbjct: 528 QLLAWRD------QALDRQDVRAAAEPEQTWQTFCGMLDEYVTILGAEPFEITDFLALLQ 581 Query: 643 QRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 + SQ V I ++S KVV ++G D V P ++ K Sbjct: 582 AGFEGASYSQIPSTLDQVLISESGMVQSQDHKVVFMVGATDLVMPDRIMTNNLLSDVDKE 641 Query: 702 KR--------GDRSRRD-------DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 GD D D+ L A +SA++ L+ S + Q+ ++ S Sbjct: 642 NLQLTLSSLDGDHYLNDSAVVQLGDESCLNYLAFLSARRHLFFSAPLKDDQE-TDLNWSN 700 Query: 747 LVQELID--YIGQSHYLPGDEALNCDESEARVKAHLTCLH-------------------- 784 V+ + + + YL + N D T H Sbjct: 701 YVRRIQRQFNLREHTYLGTPDPTNADARPFVGTKRRTISHVIQVYRDVLTTNTDRNRVGA 760 Query: 785 TRMP------FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV--PLET 836 P Q + + AR+ + S + + + + Sbjct: 761 PLQPAPVWVWLRQQLTRDPQFGELARQLMAGLSYRNQPVKLTPASVEALYGHQIYTSISK 820 Query: 837 LQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER 896 L+ F+ + F + L++ R F L S + +L+ L++ +++ Sbjct: 821 LEEFYRNQYAYFLKYGLKLRERDV---------FELSAASTGEFFHAVLDGLIKALRSDQ 871 Query: 897 L 897 + Sbjct: 872 I 872 >UniRef50_B2KE91 ATP-dependent nuclease subunit B-like protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KE91_ELUMP Length = 994 Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats. Identities = 106/687 (15%), Positives = 222/687 (32%), Gaps = 113/687 (16%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 A + E + ++ + + +I E+ +L L E+ Sbjct: 250 EPAPGVLGAAEDALFNHLISGEAENKNIRIISASGVNGELFAAAKTILE-LTENNGYKFS 308 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 +I + ++ Y + +F +P S SHP+ +LL+L + F Sbjct: 309 EIALCARVLEPYKNNLINIFEQN----KIPLNTSLEFGLLSHPLGIFCFNLLNLAHNGFY 364 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 EDVL+++ A + + R S + G++ Sbjct: 365 REDVLSVIKSQYFAVKNN--------WRALAQNSLVERGLEQWE---------------- 400 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 + + S L L + P + Sbjct: 401 ------------------------NLINKKDPAYDSSFLSFLTNLGTQLGFFNKPYPWDV 436 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 +L F + TE T+ II + ++ +EL + L Sbjct: 437 LSKHAVKILEDFVDANILTEGEKTVFNTIVDTIIQINQFSLVRESAKEKEFLEELNEALK 496 Query: 647 QERISQRFLAG-PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 ++ + + + V +M +R FKVV LLG+N+ V+P+ + L+ K +R Sbjct: 497 EQSVGKVQNSELGVTAGDVMGLRGQHFKVVILLGVNEKVFPQIVREDP--LLRDKFRRTL 554 Query: 706 R-----------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ----- 749 R R ++++ + L SA++KL++S+ RS ++ PS+ + Sbjct: 555 RDVQGFWIGQKLDRFEEEKLFYYFTLSSAREKLFLSFQ-RSDEEGKAVVPSLYLTEVCRA 613 Query: 750 ---ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR----MPFDPQNYQPGERQSY 802 EL I ++ + K LT + + + SY Sbjct: 614 AGIELEKNITNISRRELEKYFQTPQEFLNSKEMLTKIFSFPSVEENIKAAGFDWDALASY 673 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETV-----PLETLQRFWAHPVRAFFQMRLQVNF 857 ++++ + + + ++ LQ P+R FF L ++ Sbjct: 674 YNAAKAMSARSSLGAYDGIVNYGDEIFSSLSKKGFSASALQNLAECPMRFFFIKALGLDE 733 Query: 858 RTEDSEIPDTEPFILEGLSRYQINQQL-------------LNALVEQDDAERLFRRFRAA 904 D D ++G ++I Q++ L AL + E F R++ Sbjct: 734 -EADILKRDAIASNIKGTIYHKILQRVYTEIDREISMDSALAALEKIMALEMSFERYKEF 792 Query: 905 GDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEI--------DLACNGVQITGWL 956 G P ++ E +Q+ + + + + D A +++ G++ Sbjct: 793 GLYPV--VWQVITEKMAAALQEFVKKDVESMEGFAPVMFEAAAAAKHDFAGEEIKLHGYI 850 Query: 957 PQVQPDG----LLRWRPSLLSVAQGMQ 979 ++ G ++ ++ S SV + Sbjct: 851 DRIDRRGKEYRIIDYKTSQRSVKDLKK 877 >UniRef50_C7XXL1 ATP-dependent nuclease subunit B n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XXL1_9LACO Length = 1253 Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats. Identities = 87/650 (13%), Positives = 193/650 (29%), Gaps = 110/650 (16%) Query: 319 SSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL----DSSI 374 L F + PD +L + Q ++ + + V +EE+ ++ + + D + Sbjct: 271 QYHRLAEFAEQQPDVMLVDDQ--VVTVNRVSDGLVEVEEWMKAQAQFTIPEQQPRTDQGV 328 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 F + E++ + ++ ++ RD +++ +D Y+ ++ VF + Sbjct: 329 HFFTAPTRVAELQRVAAKIRQLVASGQ-YRYRDFLILTRHLDGYTTMLKPVFDANE---- 383 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE------- 487 +P + R+ +HP++ ++ + D F DVL LL ++ + + Sbjct: 384 VPIFNDNDRSMANHPLVTLLEAIFKIADHYFQLPDVLQLLKTGLVVPQERDEKGRSYYSS 443 Query: 488 ----EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 + W + G + Q W F + + Q + Sbjct: 444 QRFMSAVYTTENWCLKYG-----------KTGHAWLEQAEWEFTPH-VDPQILANNEQLK 491 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLP 601 + + + + + + LA + QL G + L + L R+ L + Sbjct: 492 KREQQQTSQINWVKSVVRNQLAPFIKQLQGASDGQTAAQILYQGLINLGVREQLEQWAKA 551 Query: 602 DA-----ETEAAMTLIEQQWQAIIAEGLGAQYGD-AVPLSLLRDELAQRLDQERISQRFL 655 + + ++ E + + L+ + + SQ Sbjct: 552 ATKRGQMDLAQQPQQVWNTMVNLLDEYVTVLGNEGTFYLTAFAEVIQVGFQTATYSQIPS 611 Query: 656 A-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR-------- 706 V + +++ KVV ++G D V P G K Sbjct: 612 TMDQVLVSETGIVQTNQRKVVFMIGATDDVMPEIKISEGLLSDPDKQLLSQGLTDGQFLP 671 Query: 707 ----SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ----S 758 R D++ L +++A+++LY+S + S + L Y GQ + Sbjct: 672 VSGMQRIDNEAMLNYLGMLNAREQLYLSAPVMGSNEERVTM-SPYLVGLATYFGQWDADN 730 Query: 759 HYLPGDEALNCDESEARVKAHLTCLHT-----------------RMPFDPQNYQPGERQS 801 + L D + K + Sbjct: 731 NQLRNDLPFAPEPRADFAKLEPFVSAPAATLTNYVQVERQAKNAGQTVSAGWRNISREMN 790 Query: 802 YARE-WLPAASQAGKAHSEFVQPLPFTLPETV---------------------------- 832 + R WL ++ ++ + L + Sbjct: 791 HERLGWLKSSLNYQNQTTKLSPEMAAQLYGHLDPDVLKQATAAGDNFDWTTVSDDQRHNT 850 Query: 833 ---PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI-PDTEPFILEGLSRY 878 + LQ F+ +P F + L + R E ++ F + L + Sbjct: 851 LATSISQLQTFYRNPYEYFLKFGLDLQKREELEITNANSGTFYHDSLEAF 900 >UniRef50_C2BHK2 Putative uncharacterized protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BHK2_9FIRM Length = 1115 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 87/591 (14%), Positives = 209/591 (35%), Gaps = 70/591 (11%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 + V ++ + P + +I + S + EV + + +++ +P + + Sbjct: 267 PKTVDLDHLRINFETYRPAPFEKNPENIKIYESISTKSEVTNMALLINKIIKTNPDIRYK 326 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 D+ V + D D Y + F +P + RR + +++ F++LL L + F Sbjct: 327 DMAVYLTDPDQYENELIKTFSRYE----IPIFLDKRRKMADNHIIKTFLALLRLKVNNFR 382 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 ED+ +L+ ++ I+++ L ++ I+ + +++ + Sbjct: 383 QEDLFYILNSKLI----GISDKDANALINFLTYRKIKGSMFENDKYFAMDEDFYEKNLVN 438 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 + + + YD + + A+++ HL L + N+ + LA + Sbjct: 439 DPKK---------DEKIAKKREEYDHVNLVRAKIL-HLTKGLDKKNMTVKDLATKIFKMI 488 Query: 587 WLPVCRDMLNAFFL-----PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + +NAF D + I ++ AI+ + + ++PLS + + Sbjct: 489 ADSDIKKSINAFQAKLLENADLDDYKENEQIWDEFVAILDQLVLLMGDRSLPLSRVVTIV 548 Query: 642 AQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL------APLGF 694 +I + + + R K+ LLGM+D +P Q +P Sbjct: 549 EAVTRDIQIGLIPPSKDHLIVTDFARDRVSNKKINILLGMDDAYFPSQKAKDYLISPDEM 608 Query: 695 DLMSQ---KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 + + + K + R + + + KL SY S ++ + S++++++ Sbjct: 609 EELEKAKIDLKLYAKDRDRAELLSLYKIISR-SDKLIFSY-ALSDKEGKDLNESLVIRDI 666 Query: 752 IDYIGQSH--YLPGDEALNCDESEARVKAH-LTCLHTRMPFDPQNYQPGERQSYAREWLP 808 + L A + + +K + L L+ + + + + E+L Sbjct: 667 RKIFPKLKKNILLDPRAEDAIFARESLKKYTLAVLNKLANKEKITDKDKQIATAFMEYLR 726 Query: 809 AASQAGKAH------------SEFVQPLPFTLPETV------PLETLQRFWAHPVRAFFQ 850 + + + L L + + + ++ + A P + F Sbjct: 727 ENQEKDENKLTYDKVKKGLFYTNDKLALADELRKVLYKKHAYSVSEIETYSACPYKHFIA 786 Query: 851 MRLQVNFRTEDSEIPDTEP-FILEGLSRYQINQ---QLLNALVEQDDAERL 897 L+ PD E F ++ L I + L+ L++ D + + Sbjct: 787 YGLR----------PDVEKEFDVDALDIGNIVHKSFEDLSRLIKDMDLDEV 827 >UniRef50_Q5M2T6 ATP-dependent helicase/deoxyribonuclease subunit B n=33 Tax=Streptococcus RepID=ADDB_STRT2 Length = 1106 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 87/681 (12%), Positives = 202/681 (29%), Gaps = 110/681 (16%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 R + + ++ + ++ + + EV + + +L + +D Sbjct: 270 RISRLLESRHDFSTVDETVTEQDKHALKVWEVVNQKEEVAQVAKSIRQLLADGK--RYKD 327 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 I+V++ D +SY + +F +PY + SHP++E SL + + + Sbjct: 328 ILVLLGDEESYKLHVGQIFRKFD----IPYYFGKEESMSSHPLVEFVDSLERIKRYNYRA 383 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 ED+L L+ + +E L +VN + I+ G Sbjct: 384 EDLLNLVKSGLYG---GFAQEDLDLFEYYVNFADIK-----------------------G 417 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE-E 586 + L + S D+ + L ++L+ L L L ++ + E Sbjct: 418 RHKFLSDFTANSRDKYN-----LDQINALRSQLIEPLDKFLNSRKQKGSSLLKKLVVFLE 472 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 + + M + + + + I+ + +++ + L + Sbjct: 473 AVQLPSQMFELSTKASEAEKEQNEQVWKAFTHILEQVETIFGDESLSVDDFLSILRSGML 532 Query: 647 QERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 VN+ ++ V LGM +P+ L+S + + Sbjct: 533 ACDYRTVPATVDVVNVKKYDLIQPHSAPYVFALGMTQSHFPKVGQNKS--LLSDEERSRI 590 Query: 706 RSRRDDDRYL--------------FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 D+ R L + +A ++L +S + + SV ++EL Sbjct: 591 NEATDEHRRLDIVTQINSKRGHFVAMSLFNAASEQLVLSQPQIINESQDDM--SVYLKEL 648 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 +D L + ++ + L T + + + + W A Sbjct: 649 LDL---GIPLVEKGRNRFEAKGDQIGNYRDLLSTVIALNSSHLDLDLDKETQTFWSVAVR 705 Query: 812 QAGKAHSEFVQPLPF---------------------TLPETVPLETLQRFWAHPVRAFFQ 850 K + +P P + L F+ + F + Sbjct: 706 YLRKRLDKDQVLIPKVIDDVTTTKVDDQVMQLVFPEEEPLKLSATALTTFYNNQYLYFLR 765 Query: 851 MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAA------ 904 L++ + E + ++ ++ +E + A Sbjct: 766 YVLEL---------EELESIHPDARHHGTYLHRVFERVMGDSSSESFDDKLEKAIAQTNQ 816 Query: 905 --------GDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC-NGVQITGW 955 + F E + + A + + ++ DL N ++ITG Sbjct: 817 DQPFEILYTEDQESRFSRQILEDIARSTASVLRDNAAVKVECEEVKFDLLLANSIKITGI 876 Query: 956 LPQVQP-----DGLLRWRPSL 971 + +V G++ ++ Sbjct: 877 IDRVDRLTDGALGVVDYKTGK 897 >UniRef50_D1PLS4 Putative ATP-dependent nuclease subunit B n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLS4_9FIRM Length = 1094 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 74/591 (12%), Positives = 167/591 (28%), Gaps = 87/591 (14%) Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 + + V+ D Y ++ F + +P + ++ A ++L L Sbjct: 309 GMPYHRMAVICRDAAQYLGPLRYEF----RLQNIPLFCDEATTPENTAPARAVHAVLDLA 364 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 S S VL LL ++ ++ E L + W + + Sbjct: 365 RSGVSSRTVLRLLKTGLV----NLPERQQTALENYA----YTWSLKAAD----------- 405 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL---------ASLLMQLN 572 WR TR GYA + ++ + + + E + A+L Q+ Sbjct: 406 --WRAPFTRSAAGYADVERAEDVRTREEAEAARVFLMERIQKFLPRVKNAGAAALTKQVY 463 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 ++ + L E L R + ++ + + + Sbjct: 464 LFLQSLGAEDTLNALAETLRG------QGRMPEADEVLREWNVVMGLLNQLAQLLGEEEL 517 Query: 633 PLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 P + + L + + V + T MR V ++G+ +G +P+ Sbjct: 518 PPADYAELFTLLLRTTDMGHIPQSLDSVILTTAGRMRLPETDAVFVVGLLEGEFPKTPGD 577 Query: 692 LGFDLMSQKP---KRGD------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 G + + ++G ++ + F +A+ +A+ L++S+ G + ++ Sbjct: 578 QGLLTHADRDAMIRQGAELPDCFENKVLREGVCFYKAMTAARSFLWLSWPGAAHAEDDT- 636 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM---------PFDPQN 793 S + + + P L + A + + Sbjct: 637 PASSALAPVRRLLQVPFAGPSTAELGASPAAALDILGVISQQPGREGEGEALRAALEDAE 696 Query: 794 YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRL 853 P Y V +++ P F Q L Sbjct: 697 GTPQSAPGYEAVRRAREKAEPAVRDTGALEKLLGPGLRVSPTRFEKYQTCPFGYFMQFVL 756 Query: 854 QVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFG 913 + R + P+ + +L + + AF Sbjct: 757 RAAPRQKAELAPNI---------SGTLTHWVLENALRRQG----------------AAFK 791 Query: 914 EIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQ--ITGWLPQVQPD 962 ++ E +++L PG ++ + ++ + G L +Q D Sbjct: 792 DLTAEELQALVEELVAEYTQANLPGITVRMQYLIERIRRNLVGLLGFIQRD 842 >UniRef50_A5VHK1 ATP-dependent helicase/deoxyribonuclease subunit B n=10 Tax=Lactobacillus RepID=ADDB_LACRD Length = 1260 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 95/691 (13%), Positives = 196/691 (28%), Gaps = 127/691 (18%) Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 EL+ +R +I F + E+ + ++ ++ Sbjct: 308 ELQQVDSYFKRYASEPIGPGEREELLDPQNIQFMTTTNRMTELNNVATQIRQLVASGK-Y 366 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 RD +++ +D Y I+ VF + +P R +HP++ +LL LP Sbjct: 367 RYRDFLILSRHLDGYQTMIEPVFAA----HNIPVFNDHERLMDNHPLVTLLTTLLELPQR 422 Query: 464 RFVSEDVLALLDVPVLAARFDITE--------EGLRYLRQWVNESGIR----WGID--DD 509 + + D++ LL +L R + + W + I W + + Sbjct: 423 GYRTADIIQLLKTWLLVPRTGTGDLMGLSDFQAAVFTTENWCLKQAIEGKNAWTTNDPEK 482 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS-GLIAELVGHLASLL 568 + + P T ++ +R+ + + + + L Sbjct: 483 IKQLWQAPGTNLTDPKYEQSRL---EKLNDQLALVKDFVANHLLPVFDQFKQAQTGQELA 539 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 L + + L W D + + + I+ E + Sbjct: 540 TALYQFLAAMGVTDRLYAWQQYQST-------RDLDLARQPQQVWTTFCQILQEYVEILG 592 Query: 629 GDAVP------LSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMN 681 + L+ + L + SQ V + ++S KVV ++G Sbjct: 593 QQELRDGTNEVLADFSELLQAGFAAAQYSQIPATLDQVVVSETGIVQSENRKVVFMIGST 652 Query: 682 DGVYPRQLAPLGF------DLMSQKPKRG-------DRSRRDDDRYLFLEALISAQQKLY 728 D V P D++S + D+ ++ ++A+++L Sbjct: 653 DDVMPEMQESDSLLTDQDKDILSAYLDEDFQYLPGTAIDQLIDEPFVHYTGFMNAKEQLI 712 Query: 729 ISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL--------PGDEALNCDESEARVKAHL 780 S +S D+ E S + ++ Y GQ D A++ + L Sbjct: 713 FS-APQSDSDDKELSISPYMHDMARYFGQPVREYPLATSKAGQDNAIDFVSAPLATINRL 771 Query: 781 TCLHT-----------RMPFDPQNYQ--PGERQSYAREWLPAASQAGKAH---------- 817 + R P P +Q A++W +A +A Sbjct: 772 VEVSRQIRDEQGVGIDRQPVMPVGWQTVAESLVKLAKQWQQSADAKVQAEGISLGQRLSL 831 Query: 818 -------SEFVQPLPFTLPETV----------------PLETLQRFWAHPVRAFFQMRLQ 854 + L L + + + LQ F+ + F + L+ Sbjct: 832 VAAGFHYQNKIDSLGNKLAQALYLRAAPDDERGRVLYASISQLQDFYINQYEYFLKYGLR 891 Query: 855 VNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE 914 + R E + D + + V L +F + Sbjct: 892 LQKRDELTLSNDRI---------GTFFHKAMETFVTTIRENNL-------------SFAD 929 Query: 915 IFWETQCQEMQQLADRVIACRQPGQSMEIDL 945 + + + QL D + Q Q + L Sbjct: 930 LAHKDNQMQRDQLIDHALVTAQENQPTLLRL 960 >UniRef50_A6CDV2 ATP-dependent deoxyribonuclease subunit B n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CDV2_9PLAN Length = 1125 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 85/615 (13%), Positives = 191/615 (31%), Gaps = 85/615 (13%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 + E + P I + E+EVL + +L + + P Sbjct: 278 PASSRSQICEALFDNPRGIKPSPSAEQIKVLAVAGQRNELEVLAVEIKQLLLQ--GVPPE 335 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 +I ++ Y I +A +PY + + PV+ A + L + + Sbjct: 336 EISLVFRSTLEYGDLIHETLSAAG----IPYFLGQEQEFSRFPVIRAIFTFLQIELDNWS 391 Query: 467 SEDVLALLDVPVLAARFD--ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + ++++LD + + + +R L + + E I G Sbjct: 392 FDSLMSILDSNYFSPDWPEYKSGTAVRCLSRILRELKIDSGK------------------ 433 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 L + Y + P ++ L E L +L+ + L + Sbjct: 434 TDILNALEKEYRKANELCTRYPDQPKRQAILLEMESA---YHLAKRLSSETQKLRGKELF 490 Query: 585 EEWLPVCRDMLNAFFLP---------DAETEAAMTLIEQQWQAIIAEGLGA--------- 626 W+ + + N F LP + L+ +++Q ++ + Sbjct: 491 VTWIEILISLANEFGLPKAWSSEEPGTEALDQRDQLVWERFQKLLFHAVAEVDQIEQFHQ 550 Query: 627 QYGDAVPLSLLRDELAQRLDQERIS-QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 + + L R L L+Q+ ++ Q G V + +R++ + + G+++ + Sbjct: 551 REAAPLDLLTFRSLLLDLLEQQTLALQTEETGRVQVLDASQLRNLSVPYLLVGGLSEASF 610 Query: 686 PRQLAPLGFDLMSQKPKRGD--------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQ 737 PR + + + +++ ++ LF E + ++L +SY S Sbjct: 611 PRSHREDCLYSEKDRGELNEYGLSLKRHANQQQEEMLLFYEVMTRFSKRLILSYPAIS-S 669 Query: 738 DNSERFPSVLVQELIDYIGQ-----------SHYLPGDEALNCDESEARVKAHLTCLHT- 785 F S + L+D + ++A++ + L Sbjct: 670 TGQPLFASPYLTALMDLFEPGALSVRQVGELNPLPRREQAMSARDLRILAIDELKRDQPG 729 Query: 786 --RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE---------FVQPLPFTLPE--TV 832 + +Q R + + A + +E Q + P+ Sbjct: 730 LFLQILEEPGFQATARNILSAVEMAVARFEQEGFTEYEGIMVSAATRQAIHERFPQDYEF 789 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD 892 L+ + A P + F Q L + + F+ G+ + I +L L + Sbjct: 790 STTQLELYLACPFQFFVQNVLGIEVPEPPELRTN---FLQRGIHVHSILTRLYEQLGSEG 846 Query: 893 DAERLFRRFRAAGDL 907 D +L+ + Sbjct: 847 DNTQLYEADQVEPLF 861 >UniRef50_A4W0M6 ATP-dependent helicase/deoxyribonuclease subunit B n=6 Tax=Streptococcus suis RepID=ADDB_STRS2 Length = 1088 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 74/576 (12%), Positives = 166/576 (28%), Gaps = 90/576 (15%) Query: 367 LDPLDSS-ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV 425 L P D I + + EVE + + + + +DI++++ D+DSY I + Sbjct: 287 LTPADQEKIQLWEVVNQKEEVEQVATAIRQHVHQ--GARYKDILLLLGDVDSYKLQIGKI 344 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 F +PY HP++ SL L RF +ED+L LL + A I Sbjct: 345 FDKYD----IPYYFGKAEEMSHHPLVHFVESLERLRRYRFRAEDLLNLLKSGLYA---SI 397 Query: 486 TEEGLRYLRQWVN------ESGIRWGIDDDNVRELELPATGQHTWRFGLTRM--LLGYAM 537 +++ L ++ ++ + + + + + LT + L M Sbjct: 398 SQKELDLFESYILFADMKGQAAFSRAFSVNGRADYDAEVIKEKRLVYDLTVLEPLRAKIM 457 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 E +++ L+ + L ++ + +E+ ++ Sbjct: 458 EPLNQLFKAGPQ------SGTALLEKFMAFLEAID-------LPKNMEKMSRNLSEV--- 501 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA- 656 + + + + ++ + + + L + Sbjct: 502 -------EQEKEEQVWKSFTHLLENFHQIFGKEKLKMDDFLAILQAGMQASHYRTVPATV 554 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF---------DLMSQKPKRGDRS 707 VN+ + + K V +GM +P+ +L+S R D Sbjct: 555 DVVNVKSYDLIEPHTAKYVYAIGMGQSNFPKVAKNTSLLTEEEMEKVNLVSASSSRFDLV 614 Query: 708 RRD---DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 R+ + + L SA ++L IS + P I + + + Sbjct: 615 SRENIKKNHAAMMSLLNSATEQLVISTPQIYNEGEDSLSP------YIKILQKMGLKSEE 668 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK--------- 815 S + + + L + + + + E + W K Sbjct: 669 RGRIKTLSPQDIGHYKSLLSRLIESERPSLETEEWEGQRAFWTVLVRHLKKKLESQSIEI 728 Query: 816 ------------AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE 863 + P P + +L F+ + F + L++ Sbjct: 729 PTITGDIASKQLSDETLAALYPEDKPLNLSASSLTNFYNNQYLYFVRNVLRLR------- 781 Query: 864 IPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFR 899 + E ++ +V + Sbjct: 782 --EQESIHPTAFQHGLFLHRIFERVVMDQSELDFDQ 815 >UniRef50_C7RGF8 ATP-dependent nuclease subunit B-like protein n=2 Tax=Anaerococcus RepID=C7RGF8_ANAPD Length = 1121 Score = 169 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 67/582 (11%), Positives = 176/582 (30%), Gaps = 61/582 (10%) Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA 413 ++ N ++I F S + EVE ++ L ++ +D+ + ++ Sbjct: 275 HLARNFERFNPLKFGGSPNNIRFLENPSTKTEVENTAR-IINYLVKEKGYRYKDLAIYIS 333 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 D Y I VF LP + R + +++ F+++L L F S+D+ Sbjct: 334 SEDEYKNEIIKVFNRYD----LPIFMDSDRKLIDNHIVKTFLAILRLVIYNFNSQDLSYF 389 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR--- 530 L + + + E+ + L ++ I+ + ++ + ++ R Sbjct: 390 LRSGLFSFSVNFEEKTI-ILENYIKNRKIKGKMFLEDKYFVYDEDFYKNLCENDPKREEK 448 Query: 531 -MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 Y + +L + E L + + R + + Sbjct: 449 LGAKTYEYQVINELRDRILDLLNPLLELKE--EKTRDLCIGIFNIIDDKDIRRGIASFQK 506 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 + ++ + + ++ I+ E + + L + + Sbjct: 507 ILKE------SGRLDEYKENDQVWDKFVEILEEIVDLMGERSSSLRKVYSLIEATCKDIN 560 Query: 650 ISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP---------LGFDLMSQ 699 + + + I + R V +LG+ND +P + Sbjct: 561 VGIIPPSKDHIEITSFARARIADRGVNFILGLNDVFFPSTNREDLIVGKGEKDKLRALDL 620 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 K D + ++ +F + + KL++SY + + + S+++ +++ Sbjct: 621 DLKVFDEDFEEREKLVFYKLITI-SDKLFLSYSLAN-RKSEAINKSIILNSIMNIFSDRE 678 Query: 760 YLP-----------GDEALNCDESEARVKAHLTCLHTRMPFDP------QNYQPGERQSY 802 E + E R + + D + + +++ Sbjct: 679 GKTYGMVYGNDLGLSIEKFSYKTMEVRALRSIRQMMRNENVDENDREIARAFIKYLKEND 738 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTL--PETVPLETLQRFWAHPVRAFFQMRLQVNFRTE 860 + E + + L +L + ++ + P + F L+ Sbjct: 739 SYELIEKGLNFTNDKKNLREDLAGSLYKKNHFNVSEIESYSRCPYKYFVNYGLR------ 792 Query: 861 DSEIPDTEPFILEGLSRYQINQQLLNAL---VEQDDAERLFR 899 E + ++ + I +L + + + + E L Sbjct: 793 ---PNIDESYEVDHMEVGNIVHKLFEDISRNLSEKNIEELKA 831 >UniRef50_A2RH76 ATP-dependent helicase/deoxyribonuclease subunit B n=5 Tax=Lactococcus lactis RepID=ADDB_LACLM Length = 1099 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 89/684 (13%), Positives = 210/684 (30%), Gaps = 116/684 (16%) Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 IL+L++R V E D K + + E+E + + + + Sbjct: 270 RILDLDSRFVITDEKIELKAEDEKY--------FRIWEAENQKVEIERVAKEIRQKIIQ- 320 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 +D V+V D +Y ++ VF +P+ + + HP++ F SL ++ Sbjct: 321 -GAFFKDFTVLVGDPAAYEITLKEVFDLYE----IPFFYAQEESMSQHPLVIFFESLFAI 375 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 + + ++DV+ LL + ++ EE + Y +V + I Sbjct: 376 KKNNYRTDDVVNLLKSK-VYTDANLDEEVIDYFEYYVQKYKIS--------------GRK 420 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 + T F + E+ + L+ E+ L L ++ + Sbjct: 421 KFTEEF-------------IESEFSQIE-------LVNEMREKLLGSESPLQVFLGN-NR 459 Query: 581 ERPLEEWLPVCRDMLNA----------FFLPDAETEAA----MTLIEQQWQAIIAEGLGA 626 ++ ++W+ + +L F + + E + Q + + E L Sbjct: 460 KKTGKKWVSDLQGLLENGNVMTNMNAYFSAAELQNEHQMADKHEQVWQMLISTLNEFLAV 519 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 + + D L L + Q VN+ + K + +G++ + Sbjct: 520 FSDEKLKSVEFLDILLAGLKNAKYRQIPANVDVVNVKDYELVEPKTNKYIYAIGLSQTNF 579 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYL--------------FLEALISAQQKLYISY 731 PR L+S + + D+++++ L + SA++ L +S Sbjct: 580 PRIKKNS--TLLSDEERLEINQTTDENQFIEQLNVANYQKNQFTVLSLINSAKESLVLSM 637 Query: 732 IGRSIQDNSERFP--SVLVQE----LIDYIGQSHYLPGDEALNCDES--------EARVK 777 + E P + +++ ++ I + E + S E + Sbjct: 638 PQIMANEQGEFSPVFQLFLKDADEKILQKIQGVNLFESLEHIGNSRSVIAMIGQIERELV 697 Query: 778 AHLTCLHTRMPFDPQNYQ--PGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV--P 833 + F ++ + + L A + L + + Sbjct: 698 ESEETSEDKRVFWSSIFRILVKSNADFQKILLDLAKDID-TVNLAPDTLEQIYGDKIYAS 756 Query: 834 LETLQRFWAHPVRAFFQMRLQVN-FRTEDSEIPDTEPFILEGLSR----YQINQQLLNAL 888 + + +RF+ + F + L + F D F E + ++ + + Sbjct: 757 VSSFERFYNCEYQYFLENTLSLETFENIDINSKIVGNFFHEVFEKVMKETDLSAENFDEK 816 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQE----------MQQLADRVIACRQPG 938 + E R F E ++ +L + Sbjct: 817 LTLVLQEVDKNYSRYFTQDATARFTWSNLEEIVRQTATVLKATVSTDELKTLLTESSFGL 876 Query: 939 QSMEI-DLACNGVQITGWLPQVQP 961 E+ + + + + + G + ++ Sbjct: 877 PKSELGNFSVDDIYLRGRIDRLDQ 900 >UniRef50_C8SXN2 Exodeoxyribonuclease subunit V gamma (Fragment) n=4 Tax=Enterobacteriaceae RepID=C8SXN2_KLEPR Length = 170 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 120/167 (71%), Positives = 141/167 (84%) Query: 956 LPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQ 1015 L QVQPDGLLRWRPSLLSV+QGMQLWLEHLVYCASGG GESRLF+RK+GEWRFP LA + Sbjct: 1 LQQVQPDGLLRWRPSLLSVSQGMQLWLEHLVYCASGGTGESRLFVRKEGEWRFPALAPAE 60 Query: 1016 ALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAY 1075 A YL++L++GY GMS PLL+LPESGGAWLK CYDA+ D +L D+ T QKAR+KFLQ Y Sbjct: 61 AQAYLNELVDGYLLGMSQPLLLLPESGGAWLKACYDAEKDVILMDEETQQKARSKFLQTY 120 Query: 1076 EGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS 1122 EGNM+V GEG DIWYQRLWR L P E I+ Q+QR+LLPL+R+++S Sbjct: 121 EGNMVVSGEGADIWYQRLWRSLEPAHYEEIIAQTQRYLLPLYRYHRS 167 >UniRef50_Q1GAB0 ATP-dependent helicase/deoxyribonuclease subunit B n=3 Tax=Lactobacillus delbrueckii RepID=ADDB_LACDA Length = 1179 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 73/603 (12%), Positives = 167/603 (27%), Gaps = 84/603 (13%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 D + + + + P +++ S E + + + Sbjct: 273 HDFAWEREKIASPASPARDLNQAWQGQGQPDLNNLQLVKADSRYAEAYFVARTIYDEVAL 332 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 RD +V+ ++ Y ++ + +P+ ++ + HP++ +L Sbjct: 333 -KGCQYRDFLVLAPNLQEYETYLAPILRQN----QIPFFDDLQQQMKYHPLVLLLENLGK 387 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEE----------GLRYLRQWVNESGIRWGIDDD 509 L + +L+++ +L + + + + L + GI++ + Sbjct: 388 LLQQAGDTPALLSIMKTRLLIPDWYLEGDAEAGEAAYLRDIDQLENFALAHGIKYSLWQK 447 Query: 510 NVREL------ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 +++ L W L ++ + + + Sbjct: 448 PLKDFTKAQVIALDQEQYQKWLDRLDKL--------RDFFVSKISRLARQLKSEKDSMTA 499 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 + + LE W L A D + +++ + Sbjct: 500 VKLFFD----FLVKNGVSARLEAWR------LKASESGDLQQAQQPEQCWNLLLSLLKDY 549 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMND 682 L + + L Q + + V + +++ +K V ++G + Sbjct: 550 LLVN-PENFAWADFFKMLTAAFSQANFATIPASLDAVTLSEYGMVQTSGYKQVFIIGAAN 608 Query: 683 GVYPRQLAPLGF----------DLMSQKPKRGDRS--RRDDDRYLFLEALISAQQKLYIS 730 G P+ F D Q D R D Y F AL A ++YIS Sbjct: 609 GSLPQINDQPNFLTTENLASLADFFDQDAYLEDSQQLRNLDQEYQFGNALALASDRVYIS 668 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 Y + +N PS+ + L+ + Y D ++ L T Sbjct: 669 YPVIN-SNNDLLDPSIYYKRLLKLVNGREYRQRDLPDIAEKDRTEFARQLLLFLTSPRAS 727 Query: 791 PQNYQPGERQSYAREWLPAA--------------SQAGKAHSEFVQPLPFTLPETV---- 832 E S + G A+ Q + L E + Sbjct: 728 LGYLAYAEENSAQSPLVAKLVELSRQYEEEKAEEIAEGMAYDNNPQDISEDLAERLYGKD 787 Query: 833 ---PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV 889 + L+ ++ + F L++ R E+ L + + L+ Sbjct: 788 LLSSVSQLESYYQNSFEYFLNYGLRLRPRAENE---------LNAIQSGNYFHRTFELLL 838 Query: 890 EQD 892 ++ Sbjct: 839 KEM 841 >UniRef50_A3CVM8 ATP-dependent nuclease subunit B-like protein n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CVM8_METMJ Length = 1049 Score = 162 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 88/533 (16%), Positives = 168/533 (31%), Gaps = 63/533 (11%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 EV + + ++ + P +I V D S P+++ VF +PYA SD RA Sbjct: 295 EVRAIAQEIRDLVAA--GVRPDEIAVAFPDFASALPYVEEVFPDFG----VPYAASDGRA 348 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 + P++ A + + +P + EDV+AL P L + E+ I Sbjct: 349 LSASPLVRALLDVAMVPARGYRREDVVALATSPYLPFTGGCELDIFSR------EARITA 402 Query: 505 G-IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 G D+ + + E I Sbjct: 403 GNWDERLAALARAAGEER----------------GRPDTPESAKSRLAEKVAAIESARKT 446 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI---- 619 + L L+ L + L + R +L + P + L+E + + + Sbjct: 447 VRELFADLSA----LEATKTLAGHIAAYRSVLERWQAPAMPEDGDPDLLEDEARNLGGFS 502 Query: 620 -----IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 + + + L+ LAQ R +R G V + + + + Sbjct: 503 GILAALERLARLLPDEKMSLAEFSSLLAQVAAGTRTGRRRSNGGVRVVGVREVAHLAVPY 562 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD---DDRYLFLEALISAQQKLYISY 731 + + G+ +G PR L F ++ + G RSR D ++RY F AL+SA+ ++Y+SY Sbjct: 563 LFVGGLVEGTMPRLTTRLPFTTDAETRRLGTRSREDILREERYYFTAALLSARTRVYLSY 622 Query: 732 IGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 S V + + + D + + R A L + Sbjct: 623 PAAEGAT--PLVHSGFVDAVREAFSPETWGSNDFPDSGLAAARRAGALLARGEFPVGMPC 680 Query: 792 QNYQPGERQSYAREWLPAASQAGKAHS---EFVQPLPFTLPET------VPLETLQRFWA 842 + E + + + + L E L+ + Sbjct: 681 PIPVREAVRRLNIENYHRKAGYDSPYDGMLDDDPAILAALAERFGEGAVFSPTALETYAD 740 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE 895 P R + + L + +P+ +P L R + ++ + Sbjct: 741 CPFRFYLERVLGLAP------LPEADP-DLTAQERGSLVHRIAYRFYSGWTCD 786 >UniRef50_B7GQ32 ATP-dependent nuclease subunit B-like protein n=2 Tax=Bifidobacterium longum subsp. infantis RepID=B7GQ32_BIFLI Length = 1101 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 83/617 (13%), Positives = 173/617 (28%), Gaps = 124/617 (20%) Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 + +S + EV + + ++P ++ D++V D+ SY I + F Sbjct: 261 IFASSASTSVCAMPDTTAEVRYAAASIKKFIADNPEISYGDVLVTSRDLGSYQAQIASEF 320 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 + +P I+ HP +A + LL + +L +L + + ++T Sbjct: 321 ----TYQGIPINIAASSTMLDHPFADAILGLLDSATYELQPQSILRILRSGIFSRYLNLT 376 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + + +N + W Sbjct: 377 PTAIDDIENQLNS--------------------------------------NNPATVWID 398 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM---LNAFFLPDA 603 HL + L + + RP M L + Sbjct: 399 ---------TDIPFAAHLQK-IRSLIQQAADVFRPRPSATVREALGGMVGFLTEYAQTIE 448 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 + T+I + ++ + + + V + LA L + I R ++ Sbjct: 449 GSAPVWTVIMNAFDDMVQQLGNDYFAEYVGI--FARNLASTLAAQSIDSRPVSASAVDVL 506 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS---------------- 707 M P++ V +LG ++ P G L+ + Sbjct: 507 PMSSPLHPYRYVIVLGCSESQLPAIPHETG--LLDDGERLDLSQFLTSQGKTLEAWNVLS 564 Query: 708 -----RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 R + F + SA Q+L ++Y N+ + S + + Sbjct: 565 GTVERRSGQEPLWFNGVVASATQQLSMTYPKS--LRNAAQACSPYISQW----------- 611 Query: 763 GDEALNCDESEARVKAHLTCLHTRM-PFDPQN-YQPGERQSYAREWLPAASQAGKAHSEF 820 + E K + + T P D + Y+ R Y + Sbjct: 612 ETGTSDTSEIIGASKRAVPTVETEYRPLDRELAYRLFTRPDYVHRVYRTHGADPSISTRV 671 Query: 821 VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQI 880 + ++ ++ +P F + L+VN + LEG + + Sbjct: 672 FNA---------SVSAIETYYRNPYEYFLKYGLKVNVANAFAFDA-----ALEGTFYHAV 717 Query: 881 NQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ---- 936 + +NA +E+ E R LP + + + C Q Sbjct: 718 LEHAVNAWIERHKNE------RDLNGLPPQPTAP----DMQELIADYSRLDRGCNQWTVL 767 Query: 937 -PGQSMEIDLACNGVQI 952 ME+ + N +++ Sbjct: 768 NEDPRMEVLRSSNRMRM 784 >UniRef50_C2KVH9 ATP-dependent deoxyribonuclease subunit B n=1 Tax=Oribacterium sinus F0268 RepID=C2KVH9_9FIRM Length = 1162 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 93/654 (14%), Positives = 191/654 (29%), Gaps = 113/654 (17%) Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 L I+ + REVE + L E+ ++I V++ D++ Y F Sbjct: 344 YPSLPHGISVIEAANISREVEEACSHI-RYLVEERGYRYQEIGVVLPDVELYRDA----F 398 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 +P + + P + S L + + + + L R Sbjct: 399 FQQGRKFAIPLFLEEDIKLFDSPFSKVLRSALEVMEKGLLYDSFFRYLR--AFPYRGMEE 456 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 E+ + L G++ + + ++ A+ + Sbjct: 457 EDRIDALENEARAKGLKG--------------------KSAFRSLFQEESLLEAEALFS- 495 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 +E+ G + L + L + L LEE ++ Sbjct: 496 --LLEENEGSHS-----LKERIESLESFTEKLMALFQLEEEAIFLKN------EGMDSLS 542 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLM 665 ++ Q Q ++++ V L E++ Q V + L Sbjct: 543 QSLERSVSQIQLLLSKMKEGLGEIPVNKKEFSAFFDMALSLEKLRQIPATNDQVLVGDLT 602 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR------------RDDDR 713 R K LG N G+ P L +++ K R + Sbjct: 603 RSRFHNPKAFLFLGFNAGLIPLPPKKKS--LFTEEEKSFLRQEHCTLSPLAWEESYIQEF 660 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 YL A +S +++LY+SY R + S ++QE + + + + +S Sbjct: 661 YL-YHAFLSPKEELYLSYPLRIPKGRGGI--SPILQEALRLFPKLKIRKLEREIQEMQSF 717 Query: 774 ARVKAHLTCLHT---------------RMPFDPQNYQPGERQSYAREWLPAASQAGKAHS 818 ++ K L+ F +++Q E+ + +A Sbjct: 718 SQAKDSLSKELPKLCKKEVLFRSEEEVLPYFHLESFQLLHSLWQKEEYKKDLEKLLEAIF 777 Query: 819 EFVQPLPFTLP-------ETV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 + LP + E + + L+ F + L + R E + + Sbjct: 778 WENRHLPLSKELSKGLYGEKIRGSVSRLEGLNRCAFFHFLRYGLHLQERKE----AEIQA 833 Query: 870 FILEGLSRYQI---------------------NQQLLNALVEQDDAERLFRRFRAAGDLP 908 F L L +++ Q+ LN + + + + F F G Sbjct: 834 FDLGNL-YHKLVESFFKKLKEEKLKGEVLSEHFQEYLNFAIAESEQDPEFAPFLEGGRNQ 892 Query: 909 YGAFGEIFWETQCQEMQQLADRVIACRQPGQSME--IDLACNGVQITGWLPQVQ 960 Y F F E + L ++ +++E + + G + +V Sbjct: 893 Y--FLHKFKENAKTILWVLERQLSGGDFQVEALERDFHYESDTLSFRGRVDRVD 944 >UniRef50_C5C3C7 ATP-dependent nuclease subunit B-like protein n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C3C7_BEUC1 Length = 1043 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 100/718 (13%), Positives = 201/718 (27%), Gaps = 86/718 (11%) Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 R+ + L+D + L ++D + A AGV + + Sbjct: 200 RLAHAERELLAALADARPLHAV--------VALTGVRRADEEVVRGLAEAGVEVPQERAD 251 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 D R + EV ++ L+A LE P V+ A Y+ Sbjct: 252 DGARLGPAPPVATYVRHASDADDEVRLVARELVATLETVPAHRA---AVLYAGASPYARL 308 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 + + P R + +F++LL LP +RF DV L + Sbjct: 309 LHERLETVGIRVNGP----GVRGVAERAITRSFLALLRLPQARFARADVFRALADAPVRT 364 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 + + Q + + G D D W R+ Sbjct: 365 SDG-SPVPVARWEQVSRLAAVVEGTDWDARLR---------DWAARQHRVAETERAADDP 414 Query: 542 GEWQSVLPYDESSGLIA--ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 + A +G L + + + R + L + Sbjct: 415 RPAVLEAADRDVETAEAMRREIGALIADVTRGTELRTWRELAAWALDLLAARYGESDDLR 474 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 E + A + + + + LS + + L++ V Sbjct: 475 RLPPEEQYAAAALTSALRGLE---VLDDVDPVADLSTAVEAIELELERAVPRVGRFGEGV 531 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL---GFDLMSQKPKRGDRSRRDDDRYLF 716 + L + + VV ++G+ + YP +L G D + + DDR+ Sbjct: 532 YVGPLGEVAGLDADVVFVVGLAEDAYPGRLRADALLGADARAATDRLAPARTWIDDRHRA 591 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG-------------QSHYLPG 763 L +A ++ ++ ++ ++ER P+ + + + +S +L G Sbjct: 592 LLGAFAAAPRVVATFPRGDLRRSTERLPTRWLLPTLRALASDRDLAVTDWDTIRSPHLTG 651 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 + + + + A P AR+ L G + + Sbjct: 652 SPSFATELTTTPLPADEQEW-RVRAASAGALVPDAVVDAARDLLAGRRGPGLSRYDGDLS 710 Query: 824 LPFTLPET------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR 877 LP+ V +L+ F P F Q L+V E P + L Sbjct: 711 ASAGLPDHATGTPVVSPTSLESFAECPHAWFVQRLLRVQPLELPEETVTISPLEIGTLV- 769 Query: 878 YQINQQLL----------------NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC 921 + +L+ + + + R G + E+ E Sbjct: 770 HACLDRLVRTSEALPANGAPWSAADRARLAEIFDTKAREAARRGATGHARLWEVEREALL 829 Query: 922 QEMQQ----------------LADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDG 963 +++ + LA + + + + + V + G +V G Sbjct: 830 RDLGRMLDDDDAWRASRGATVLASELTFGTDGAEPVRVAVPGGAVALRGSADKVDRAG 887 >UniRef50_B6WA23 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6WA23_9FIRM Length = 910 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 87/606 (14%), Positives = 188/606 (31%), Gaps = 93/606 (15%) Query: 339 QSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 +SDIL++ + + E N S+I S E+E + + ++ Sbjct: 268 KSDILDINH-------LYENFEKYNPEKFWDKTSNIKIVESISSTNEIENMALMIEKLIR 320 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 + DI +++A+ D Y I+ +F +P I + + V++ ++SL+ Sbjct: 321 --KGYSYSDISLVMANEDEYENLIRRIFSRM----NIPIFIDKSQKMSDNHVVKTWLSLI 374 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY---LRQWVNESGIRWGIDDDNVRELE 515 L F D+ A + ++ D E L + ++N I+ + Sbjct: 375 RLVVFNFRKTDLEAFIRSDLI----DFGENSLERVLVFQNYMNTRKIKGSM--------- 421 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 + T Y E + + + + + +I +L L + + Sbjct: 422 IFDDKYFTLDENF------YKGEIKEEKKEELAKVNSIRKIILDLTNDLYEISNKNISAS 475 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETE----AAMTLIEQQWQAIIAEGLGAQYGDA 631 + + L + + N + + + I ++ I+ + + Sbjct: 476 DIVKKIFNLID-NERIKSGFNHYQEYIKDNKIEIYEENKQIWDKFITILEQIVSIMKDGK 534 Query: 632 VPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 L + + + + I A V I R K+ +GM D +P Sbjct: 535 ANLRKIYKLIQKACEATTIGLIPPAIDQVLIGDFSRDRINDRKIKIFVGMTDIYFPENNN 594 Query: 691 PL--------------GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 GFDL K K+ D+ + L S QK+ SY + Sbjct: 595 SDMLISENEKTSLEKEGFDLKIYKAKKNDKILLN-----ILRMFTS-SQKIIFSYSLIN- 647 Query: 737 QDNSERFPSVLVQELIDYIGQSHYLPGDEA-------------LNCDESEARVKAHLTCL 783 ++N S + ++I+ Y + + +K Sbjct: 648 KNNDPMNKSTSISDIINIFPNISYQKISTGKFDLVKYSKDLLDMKAYQILWDIKEKEKVS 707 Query: 784 HTRMPFDPQNYQPGERQSYAREWLPAASQAGK------AHSEFVQPLPFTLPETV----- 832 F Q + S E+ + + + +S PL + + + Sbjct: 708 EIEKEFVKAYLQFKKDFSKNYEFNISKNSSYDLFIKGFTYSNQKNPLDKEISKKLYNKNR 767 Query: 833 -PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ 891 + ++ + P + F L+ S+ D + + + Y + ++ + Sbjct: 768 FSVSEIESYARCPYKYFINYGLRAK----KSKNLDVDMMEIGNIVHYNMEN--ISKDLRG 821 Query: 892 DDAERL 897 D E L Sbjct: 822 IDIENL 827 >UniRef50_Q02D21 ATP-dependent nuclease subunit B-like protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02D21_SOLUE Length = 987 Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 88/640 (13%), Positives = 180/640 (28%), Gaps = 86/640 (13%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 A + +++ + S + P+ D ++ E + R+ A + Sbjct: 215 EPATSLESLQRYLFSTDAVPVRDEDGTVEIFSTSGEALECVEIARRIGAR-----GIGFD 269 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 + +++ + Y P + A +P + R +R+ +F++LL + R Sbjct: 270 ECAILLRSPERYQPLVV----EALRRAGIPAHCT-RGSRRPDAAGRSFLALLHCAEERLS 324 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 + L + + + + ++ + G R L + Sbjct: 325 ASRFAEYLSLGQMPESE--EPRTPAAWERLLVDAAVIGGAARWETRLRGLREDFE----- 377 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 + + + L + M + L + E Sbjct: 378 -------------RRYAAAEEEEERARWRQRIDRLEALRAFAMPVIERLAALPERANWGE 424 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 W+ L F L D + + + I V L + L R Sbjct: 425 WIETLTA-LAEFTLNDPTRVLELLEELEPMREI----------GPVGLGEVLLVLGPRFQ 473 Query: 647 Q-ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 Q + G V + + R + F+ V + G+N+G++PR A L Q+ G Sbjct: 474 QLSSAPEGARYGKVWVGGIEEARGMAFRAVYVPGVNEGLFPRPPAEDPLLLERQREALG- 532 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL--------------VQEL 751 + R +D L A A + +SY + R PS V E Sbjct: 533 IALRAEDTELLGIAAACATEHFALSYSRLDLLTGRVRVPSFYAFAAHRAAGGSEIDVHEF 592 Query: 752 IDYI--GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG---ERQSYAREW 806 + N ++ + L L Q + +S W Sbjct: 593 EKRARSATGTRIGWPAPENAADAIDDAEFDLATLAPLTKGSGQYLKSLPGRAVESLRARW 652 Query: 807 LPAASQAGKAHSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRT 859 + + A V + + TLQ++ P R + L + Sbjct: 653 MRWHAPWKAADGLVVDEIGDDALKRYRLGARAWSPSTLQQYARCPYRFALRGILGLRAVE 712 Query: 860 EDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFG-EIFWE 918 + I ++ R ++ ++ L R + LP + Sbjct: 713 NPTGIQ-----RMDPAQRGELFHRV---------QFELLRDLASRELLPVSPATLAGALD 758 Query: 919 TQCQEMQQLADRVIACRQPGQSMEIDLACNGVQ--ITGWL 956 ++ +A + A P ++ + GWL Sbjct: 759 RLDAVLEDVAAKAEAELAPAIPQIWRGEVQAIRADLRGWL 798 >UniRef50_C0WBY1 Predicted protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WBY1_9FIRM Length = 1037 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 84/732 (11%), Positives = 203/732 (27%), Gaps = 144/732 (19%) Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 L+ + GK L D +A + D LL + I+ + + Sbjct: 236 LVKALGKRVSISFGLFYDESRPDLSEATRKLEED-LLGDGYEKIIAPKKVSRPEDLAYFA 294 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 I S E++++ + L+ + P +I+++V +++ Y Sbjct: 295 ETFPKATGDAVAAQHIYLGEASSVDSEIKMVLTDVKKKLKS--GVAPHEILLLVRNLNDY 352 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 G + L ++D P+ L ++ + +LAL+ + Sbjct: 353 QGL-----GRYMEEYGLLSTLADVTDLAGQPLPLFLTKLWEAALTKDDTMPLLALMKTTL 407 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 + F + R+ +G+ +E Sbjct: 408 MQELFHVD-------------------------------------------RIAVGHLVE 424 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 Y E+ G + E + HL+ + L L + +W + L + Sbjct: 425 E---------SYIETPGFLLERISHLSG-VSDLKPLFEALQTPKTCTQWRDYLDERLTEW 474 Query: 599 FLPD-------------------AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 L A++E + + +A+ V L + Sbjct: 475 DLVRTFGRLHQEGKVTLSEVKIMAQSEDFVRAFFDRLEALFEAVGSKDLS--VGLGDIFS 532 Query: 640 ELAQRLDQERISQRFL-AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 + L I+ + + ++ +P+ V +LG+ DG++P Sbjct: 533 YWKEALIGTTITLTPSHEEGIRVMEASDIQGVPYPYVYILGVRDGLFPAISRESWLYSDE 592 Query: 699 QKPKRGDRS--------RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 ++ + R DR+ F A+ A++++++S+ S ++ Sbjct: 593 ERTELAALDIPLGTSARRLARDRFFFASAVSLAEKEVHLSWFADDEGG-----ASYYIER 647 Query: 751 LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA- 809 L + AL + V + + +Y + + A Sbjct: 648 LRHFFT-------PHALPFVTYHSDVHDCYSEPQMVRYLMEAENLGEKEATYLADHVDAK 700 Query: 810 --ASQAGKAHSEFVQPL------PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 + + + L P + L F P F +++ + Sbjct: 701 ILLRAQDEKNRFAPKSLYNGYLGPQEETLHLSASQLDGFLTCPFMYLFTHVWKLDVKEAK 760 Query: 862 SEIPDTE------PFILEGLSRYQINQQLLNALVE------QDDAERLFRRFRAAGDLPY 909 + P + L + + L +E + + + GD+P Sbjct: 761 TAFPTPDVVGNLIHLTLSRFMGRHLGEALFTKELEMLWQELSEAYQAAYTEMERNGDIPR 820 Query: 910 GAFGEIFWETQCQ--------------------EMQQLADRVIACRQPGQSMEIDLACNG 949 + + ++ + + + ++ + Sbjct: 821 SRYSDHIRKSYEEWLKRWLRMEVDYEEKSPTGVTVCAVEKAFGRKGAAWPPYDLTVDGKK 880 Query: 950 VQITGWLPQVQP 961 V ++G + ++ Sbjct: 881 VYLSGQIDRIDR 892 >UniRef50_C5CHH9 ATP-dependent nuclease subunit B-like protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CHH9_KOSOT Length = 1030 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 79/657 (12%), Positives = 188/657 (28%), Gaps = 72/657 (10%) Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 I S+ L + + +++ + ++ V EVE + + + Sbjct: 247 ITSEKRFLSEQHLPKNLEPFLKTFFSEQKITQSCENVEVIVASDIFNEVEYISREIKRTI 306 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 + P DI ++ +D Y F + +P+ ++ + Sbjct: 307 KS--GYEPGDIAIVASDFSRYEKL----FSERLDEYGIPFRSEGDEPLLESRAVKMLLLP 360 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 + F E ++A+ D + ++ ++ ++ + + +++ Sbjct: 361 FETAVNGFKPEKIVAMGDFG-----YGGSKLDTKFFESIAIQARLIYDYPTLTLQK---- 411 Query: 518 ATGQHTWRFGLTR--------MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS-LL 568 +W L R + + + Q + Y E + E + + Sbjct: 412 --RVESWEERLERYKELVQRKIRAVEEISDEEFIEQEISGYREVILRVDEEIEPAIERIF 469 Query: 569 MQLNIWRRGLAQERPLE-----EWLPVCR--DMLNAFFLPDAET-------EAAMTLIEQ 614 L +R ++ + EW + R + E E + +++ Sbjct: 470 QVLAPFRSLSRRDCRIYREYFYEWSELIRIEERYRKLVEESEEEPFRKLEGERELLALKR 529 Query: 615 QWQAII---AEGLGAQYGDAVPLSLLRDELAQRLDQERI-SQRFLAGPVNICTLMPMRSI 670 + ++ E L + + + L L S R + V I +L+ R Sbjct: 530 FFNDVLPALEELLLFLGKERISPADYHRYLMLILRNTSFKSSRAIENRVEIQSLLNARFS 589 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDL---MSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 K+ +G NDG YP + + PK + + A+ +L Sbjct: 590 RKKIKFFVGFNDGYYPMIRMNPLYSFTQYDEKAPKDLLLVKEKQQKLNLYLAVTRTSDRL 649 Query: 728 YISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 Y SY S D PS +Q++I G + G + + + + Sbjct: 650 YFSYP-ESTIDGEPLLPSAYLQDVIKSAGVTPERVGQKEGRKVDIIPEL-ETVMSEKELK 707 Query: 788 PFDPQNYQPGERQSYAR-----EWLPAASQAGKAHSEFV---QPLPFTLPETVPLETLQR 839 + G +S + + + + + + + + LQ Sbjct: 708 IAVANYFNTGHWKSLKDRFGMGDLEKVLQGFNREFTWIISNRKKIEDHIGKVFSFSRLQS 767 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE---R 896 + P + L++ P+ F L L + +L + + Sbjct: 768 YHKCPFSFYLAYILKIQ-------TPEEGLFELTPLEEGNVYHNVLKDYFSKSALDWEKS 820 Query: 897 LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD-----RVIACRQPGQSMEIDLACN 948 L R + +E + + + ++ + +L Sbjct: 821 LEENMRKYIRHDSELVFKFEYERLRRVIAEYIQIKESKKLPKVEGEFEPTYFELGFG 877 >UniRef50_D1CD72 UvrD/REP helicase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD72_THET1 Length = 779 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 65/462 (14%), Positives = 134/462 (29%), Gaps = 50/462 (10%) Query: 327 VDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREV 386 LL E+ + A ++ R + + + Q E Sbjct: 282 YPEAKVILLEQNYRSYQEILDVASHIISSNRLRRPKKLWTNKSGGALVRVREAYDEQDEA 341 Query: 387 EVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 + + + T D VM P ++ F +PY I Sbjct: 342 SYIAREISRLTSLGE-YTYSDFAVMYRTNSQSRP-VEEAFSRY----RIPYQIIGGTRFY 395 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 ++ ++ L L + + + +++ + I + ++ L + + I Sbjct: 396 ERREVKDVLAYLRLIHNPHDAASLRRIIEN--TPSGRGIGKGTMKTLEDLASRAHI---- 449 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 + + + LG G + L + E + L Sbjct: 450 ----------------SLWDAIE-IALGIKSLEEVGAFLPNLEIPKLQSKAKESLKQLVG 492 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 L+ +L R L ++ L + +F AE + +E I A Sbjct: 493 LIYELREQRDILTLPHLIDTLL--IKSGYASFLSSGAEE--DLERLENARDLISIAQDYA 548 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 + L E+ L + + + V + TL + + +KVV ++G +G+ P Sbjct: 549 AIDTSEALVEFLQEV--ALQSDVDTMQNNGNQVTLITLHAAKGLEYKVVFIIGFEEGLLP 606 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--P 744 + S +++ L + A +KLYISY + + P Sbjct: 607 HARSMDR------------ESDIEEECRLAYVGVTRAMEKLYISYAFHRNVFGATQTNVP 654 Query: 745 SVLVQEL-IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 S + + D + S G S + + Sbjct: 655 SRFLANIPPDLLDGSLPSLGRRGPGRLTSTTSPRTPSGSTYP 696 >UniRef50_Q2FUG2 ATP-dependent nuclease subunit B-like n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FUG2_METHJ Length = 1140 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 88/549 (16%), Positives = 173/549 (31%), Gaps = 97/549 (17%) Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD 441 P E+ + ++ + + ++ DI + D S + A D +P S Sbjct: 286 PATEMREVIREIVRL--HEIGVSYEDIAIATPDFRSTRVYA----LEACTDSGIPVRPSQ 339 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 QS P++ ++S+ L + ++++ ++ P R++ EE +SG Sbjct: 340 GSLLQSSPLIAYYLSIFDLIEKGMRYDELVRVIQSPYCRFRWE-PEEDADQKSGDQKKSG 398 Query: 502 IR------------------WGIDDDNVR-ELELPATGQHTWRFGLTRMLLGYAMESAQG 542 R +G+D ++ E LP + G + QG Sbjct: 399 KRDSRYKYLSYKNFDLLCRTYGLDGGHIDWEKRLPDVLLFSDDEGDE-----QPLPDGQG 453 Query: 543 EWQSVLP----YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 QS P Y L + + +++L + L +R + E + + +L Sbjct: 454 FVQSKKPVSRTYHPRRPLEKQEIADTIEGIIRLVGIIKRLRDKRTIREHIWHFKTILKEI 513 Query: 599 FLPDAETEAAMTL-----------------IEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 P A +L + + Q + G+ + AVP++ + Sbjct: 514 GSPVPGLAHANSLNAWLTDEEYLDLSSFHTLLSELQDLSGTGVISYLNPAVPVTFIDFIG 573 Query: 642 AQR--LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 A R L ++ + A V + + + + V L+ +N+G PR L F S+ Sbjct: 574 AVRHVLQEKSGNVSPDASGVILTGIREIAHQHYPYVFLVSLNEGHIPRLTTRLPFTNSSE 633 Query: 700 KPKRGDRSRRD---DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 + R+ D ++Y F+ AL + LY+S+ +D SV + DY+ Sbjct: 634 NSRMDTRTLSDILRQEKYQFITALAAGTTHLYLSW--YEHKDERTVLSSVFI----DYLK 687 Query: 757 QSHYLPG--------------------------DEALNCDESEARVKAHLTCLHTRMPFD 790 S LP + S + + + Sbjct: 688 SSTLLPEWGRGSDEGGYSGFPGDMEASYSAGVCIHNSEWERSRSYIPEDVLLSSLVQRIS 747 Query: 791 --PQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAF 848 R Y H +F + L+ + P R + Sbjct: 748 IERTYRFRLNRSEYDGIIGDDQIIRSALHFQFSPAYSW------SASMLETYAKCPFRFY 801 Query: 849 FQMRLQVNF 857 + L + Sbjct: 802 LERVLHIRP 810 >UniRef50_B0MQS6 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQS6_9FIRM Length = 1132 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 86/669 (12%), Positives = 177/669 (26%), Gaps = 80/669 (11%) Query: 231 GKHIEIHLLFTNPCRYYWGDIK------DPAYLAKLLTRQRRHSFEDRELP--LFRDSEN 282 + + +HL GDI D K RQ + + + D Sbjct: 143 AERLPVHL------AEKMGDIAAVYSVYDKKLTEKYADRQDNLTLAAQVIRNGDSFDENT 196 Query: 283 AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDI 342 + D L + G +++ L E+ E+ A D T + DI Sbjct: 197 TIYIDGFDSFSGAQQNFLRALADKGVNFVVALCTDENKAEVFATCDRTERLFERGNREDI 256 Query: 343 LELE-----NRAVAGVNIEEFSRSDNKRPLDPLD-SSITFHVCHSPQREVEVLHDRLLAM 396 R G D IT S E + + + + Sbjct: 257 KYTRLCGKAPRYKNGNLKALRDFLQTGVKDSKADSDGITMAYSSSVSGEADFVCANIRKL 316 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + DI V+ A Y + SA A +P P+L F + Sbjct: 317 V-RSEGYRYSDIAVICASPAKYKDAV----NSAAARYDVPVFADLPVPISEKPMLRFFEA 371 Query: 457 LLSLPDSRFVSEDVLALLDVPVLA--------ARFDITEEGLRYLRQ-WVNESGIRWGID 507 LL D+ ++L + + +T + + Q + E W + Sbjct: 372 LLKAADNP-TGTNILRYIRSGFVRLPSEKNNGKTVPMTLKERHLVEQHLMEEYAECWDLK 430 Query: 508 DDNVRELELPATG-QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 ++ + P + + + + + G ELV + Sbjct: 431 ---RKKWDKPMPHITNASEQRVEEIRIATVTP----LVEFAKSVRGIGG--RELVKKFTA 481 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 L + ++ D E + + ++ Sbjct: 482 FL------FDKVDISAAIQGKCQ---DNSTRQLRYVKELTEEYNQLWRTVSEMLTSLYET 532 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 + L+ + + IS+ V RS K V ++G DG + Sbjct: 533 LDDTPLTLAEFSALIHSCASRISISRTPNVLDSVLFGDPARTRSREVKAVFVMGAADGAF 592 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDD----RYL-----FLEALISAQQKLYISYIGRSI 736 P S +R + + + RY +A+ A +KL+I++ Sbjct: 593 PDIYPEGNSVFTSDDVQRLAENDIELENDEARYSSAVLDAYKAMTLAGEKLFITFT---- 648 Query: 737 QDNSERFPSVLVQELIDYI-------GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 + S + ++ L E++ E + + + + Sbjct: 649 --GEKENASEYIADIAKRFGAELINVDNLDALYMTESVKSAEKQYVINSAQLTDGQKKAV 706 Query: 790 DPQNYQPGERQSYAREWLP--AASQAGKAHSEFVQPLPFTLPET-VPLETLQRFWAHPVR 846 + + + S + + P P+T + +++ Sbjct: 707 EAVLSENEKEPSSIDRIKAVMSNNSGNSDIHRISDIAPIVFPQTALSPTAIEKLNGCKFA 766 Query: 847 AFFQMRLQV 855 F + + + Sbjct: 767 YFLRYGMNL 775 >UniRef50_A9BDV1 UvrD/REP helicase n=44 Tax=Cyanobacteria RepID=A9BDV1_PROM4 Length = 809 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 58/413 (14%), Positives = 122/413 (29%), Gaps = 74/413 (17%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 I C E E + RL + + L DI ++ Y Q+ V + Sbjct: 375 IKLTRCDDEISEAEAVVHRLRLLEAHNKDLKWGDIAIL------YRTNAQSRVIEESLVR 428 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY + ++ ++ L L + S +L +L+VP + I + ++ Sbjct: 429 WNIPYIVVGGLRFYDRREVKDILAYLRLLINPSDSVSLLRILNVP----KRGIGKTTVQR 484 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 ++ GI Sbjct: 485 FSDASSQLGI------------------------------------PLWEVVSDPEAIRS 508 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLE---EWLPVCRDMLNAFFLPDAETEAAM 609 G A+ + L+ L + + ++ E +++ E + Sbjct: 509 LGGRSAKGLLKFKELIDDLRLSLNNTEPSQLIQLVMEKSGYISELIATATDEAEERRRNL 568 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + + +A L L + + + + TL + Sbjct: 569 QELVNA------SLQYQEENEAADLEGFLA--TAALASDADKKDTAHDRITLMTLHSSKG 620 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F +VCL+G+ G++P D + +++R L L A+++L++ Sbjct: 621 LEFPIVCLVGLEQGLFPS------------YRSLDDPASLEEERRLCYVGLTRAKERLFL 668 Query: 730 SYIGRSIQDNSERFP---SVLVQELI-DYIGQSHYLPGDEALNCDESEARVKA 778 + R P S+ + E+ + I L G AL + R+ Sbjct: 669 FHATERRIWGGMREPAVSSIFLSEIPSELIEGDIQLAGGAALRRERRMDRLTR 721 >UniRef50_A8LAX0 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria RepID=A8LAX0_FRASN Length = 851 Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats. Identities = 69/426 (16%), Positives = 126/426 (29%), Gaps = 74/426 (17%) Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSS-ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 A V R + D D I V + E + + + L ++ P D Sbjct: 395 AANAVIARNAQRKPKRLWSDAGDGERIVGFVADNEHDEAAFVAEEI-DRLGDENLARPAD 453 Query: 408 IIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 + V Y Q+ VF LPY + + ++ L + + Sbjct: 454 VAV------FYRTNAQSRVFEEIFIRVGLPYRVVGGVRFYERREIRDLLAYLRVLVNPTD 507 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI-DDDNVRELELPATGQHTWR 525 + ++ +L+VP R GI D + + Sbjct: 508 TVNLRRILNVP-------------------------RRGIGDRAEAMVSAFAERERIAFS 542 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 L+R DE G+ + + L R L PL Sbjct: 543 EALSR-------------------VDEVPGVATRSARSIRDFVALLEGLREQL-PAGPLA 582 Query: 586 EWLPVCRD--MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 L+ D ++ ++ E + L+ +++A Sbjct: 583 VIEATLERTGYLSELVAEDTIEAQGRVENLRELVGVVQEFTERRPDGT--LAEFLEQVAL 640 Query: 644 RLDQERISQRFLAGPV-NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 D ++I + V + TL + + F VV L G+ DGV+P Sbjct: 641 VADADQIPDDDGSDGVVTLMTLHSAKGLEFPVVFLTGLEDGVFPHMRT------------ 688 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHY 760 GD + +++R L + A+ +LY++ PS + E+ D + + Sbjct: 689 LGDPTGLEEERRLAYVGVTRARARLYLTRSQVRSAWGQPAYNPPSRFLGEVPDSLVEWRR 748 Query: 761 LPGDEA 766 LP Sbjct: 749 LPEPAP 754 >UniRef50_C7QGW9 ATP-dependent DNA helicase PcrA n=8 Tax=Bacteria RepID=C7QGW9_CATAD Length = 806 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 69/406 (16%), Positives = 124/406 (30%), Gaps = 72/406 (17%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYL 435 +V E + + + + L + T + V Y Q+ VF L Sbjct: 397 YVADDEHSEAQFVAEEI-DRLSDAKETTYGGVAV------FYRTNAQSRVFEEVFVRVGL 449 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY + + ++ L + V +L+ P + I E+ L + Sbjct: 450 PYRVVGGVRFYERKEVRDALAYLRALANEDDIVSVRRVLNTP----KRGIGEKAEESLER 505 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 I +G L R DE+ G Sbjct: 506 LSARERITFG--------------------DALRR-------------------ADEAPG 526 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQ---ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 L A V + ++ R A+ LE L +L D++ T I Sbjct: 527 LAARSVKAVQGFTQMMDELREMAAEYGPAHVLEAILER-TGLLQELQ--DSDDPQDETRI 583 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF-LAGPVNICTLMPMRSIP 671 E + + Q L + +A D ++I G V + TL + + Sbjct: 584 ENLRELLAVALEFEQGQPEGRLPEFLERVALVADSDQIPDGEDHEGMVTLMTLHSAKGLE 643 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F VV L GM DGV+P + GD+ +++R L + A+++LY+S Sbjct: 644 FPVVFLTGMEDGVFPHMRS------------MGDKKEMEEERRLAYVGITRAREQLYVSR 691 Query: 732 IGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 + + PS + E+ + + + + Sbjct: 692 SVYRSAWGAPQYNPPSKFLGEIPEPLVEWERTAPEPKTGERSPFGD 737 >UniRef50_D2PY24 ATP-dependent nuclease subunit B-like protein n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PY24_9ACTO Length = 1050 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 142/1044 (13%), Positives = 274/1044 (26%), Gaps = 191/1044 (18%) Query: 94 KLMTLLPQLLEREDFTLLRHYLTDDSDK--RKLFQLSSKAADLFDQYLVYRPDWLAQWET 151 +L ++ +L + + L D+ + ++ A L YL P Q Sbjct: 37 RLHHVVTRLKAGDPMKPVTLLLPDNLTGVVARRHLAATGVAAL---YLATLPRLAEQLAA 93 Query: 152 GHLVEGLGEAQAWQAPLWK-ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSR 210 G L + A W+ AL + + H + + E PGL Sbjct: 94 GLLAPRRPATRPIVAATWRTALSKAPGVFDEVAEHPSTIQALAAAHRELRDLSDPGLEK- 152 Query: 211 VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFE 270 + S L P +Q + C D D L + T + Sbjct: 153 --VAAASGLGPSLIQL-------------HRHVCDQLQTDWYDETDLLRAATERAT---- 193 Query: 271 DRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVT 330 P + L+ +AS G D Sbjct: 194 --ADPAAVAELGSLVLYLPQELTQAEASFVASLGIAAADV------------------TV 233 Query: 331 PDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLH 390 L ++D + G+++ + EV + Sbjct: 234 IVGLTDVKRADRAVRRSLERIGIDLPPSISKNYPVAT-------EVLNASDADDEVRCVV 286 Query: 391 DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 +LA LE+ P + V+ A Y+ + +A P R + Sbjct: 287 RDVLATLEKTPAHR---VAVLYAAATPYARLLHEHLAAAKVTVNGP----GTRPVHERAL 339 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 + +L+L D D+ L F + + +G+ G D D Sbjct: 340 ARTLLEVLALVDHDLPRADLFRALANAPTRD-FTGERIPVPQWERLSRAAGVVRGDDWDV 398 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 + + +G + A L + ++ Sbjct: 399 RLARYADTERRTA--------------DQERGAEDPRPAVARRAEHNASHALRLHAFAVE 444 Query: 571 LNIWRRGLAQERPLEEWLPV-------CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 L RR L +E W + D+L + E + A +E + + Sbjct: 445 L---RRRLNAAALMESWSELSHVVLRLFHDLLGDYASLPVEEQYAAVAVEGTLRGLST-- 499 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 + G L++LRD L L Q V + L + VV ++G+ + Sbjct: 500 -LDELGTPASLTVLRDVLDLELQQSLPRVGTFGTGVLVAPLSASIGLSVDVVFVVGLAED 558 Query: 684 VYPRQLAPLGFDLMSQKPKRG-------DRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 +YP +L L+ + + R R D + L A + ++ S+ + Sbjct: 559 LYPGRLHEDA--LLPHRVREAAAPELASARDRLDRKQRHLLAAFSAGASRVVASFPRGDL 616 Query: 737 QDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP 796 + +S R P+ + + + H L + + + Sbjct: 617 RRSSRRLPTRWLLGTLRELSGDHALAATVWDQASYDGHLLTSASYS---------GSLTT 667 Query: 797 GERQSYAREWLPAASQAGKAHSEFV----------------------------QPLPFTL 828 + + ++W A+ AG ++ V P T Sbjct: 668 AKLPATEQDWQVRAAAAGLTLTDAVVDRARLLLRARAADEFTRFDGNLSGVDGLPDYATE 727 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL--- 885 +L+ + A P F + LQV ++ P + L ++ + Sbjct: 728 DRIASPTSLEAYAACPHAYFVERLLQVQPLEAPEDLLVISPVQVGNLIHNSLDAFVTRLA 787 Query: 886 -------------NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQ------------ 920 + L +RF A G + + Sbjct: 788 GSLPGYGEPWSPEQRSLLLTIGADLAQRFEAEGLTGHPRLWQRERLRILGDLMVLLDDDD 847 Query: 921 ----CQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ--PDGLLRWRPSLLSV 974 +A + +EI + V + G +V DG + Sbjct: 848 RWRAEHNASVVASELRFGLDGEPPVEIPIPSGRVLLRGSADKVDLGKDGTIYVTDVKTGG 907 Query: 975 AQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL--------SQLIEG 1026 + A + + + + P+ A A L + Sbjct: 908 FSRYE---------AIENDP-----VAAGTKLQL-PVYAYAARARLGDESTPVEAAYWFV 952 Query: 1027 YREGMSAPLLVLPESGGAWLKTCY 1050 + G P+ + PE ++ Sbjct: 953 RKGGRRIPVPLTPEVAERYVHALD 976 >UniRef50_C6A858 Superfamily I DNA and RNA helicase n=18 Tax=Bifidobacterium RepID=C6A858_BIFLB Length = 939 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 126/387 (32%), Gaps = 72/387 (18%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPADRYL 435 + + Q E + ++L L E+ L D+ +M Y Q+ ++ Sbjct: 395 YAADTAQLEAHWIAQQILH-LHEEKGLPYSDMAIM------YRANAQSRSLEEGLIQAHI 447 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY + ++ I+ L + ++ +L+VP Sbjct: 448 PYQLIGGTKFYERREVKDAIAYLQAIVNPADDINMRRILNVP------------------ 489 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + G+ +L L A + Q W ++ ++ G Sbjct: 490 -------KRGLGTRAESQLTLFANEHN------------------QTFWWAIEQLEDIEG 524 Query: 556 LIAELVGHLASLLMQLNIWRRGL----AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + A + + + R ++ + + ML + + + Sbjct: 525 MSARTANAVRAFRELMTSLRTFAGEHDSKPSEIVAQVLEQSHMLELLRKSEDPQDESRVE 584 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI-SQRFLAGPVNICTLMPMRSI 670 Q Q++ AE L+ + A D +++ + +G V + TL + + Sbjct: 585 NLSQLQSVAAEFEQNTPDTT--LAGFLETTALVADSDQLPGEGHDSGKVTLMTLHTAKGL 642 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 + +V L GM G +P A D +S ++R L + A+++LY++ Sbjct: 643 EYPIVFLTGMEQGTFPHSRAMENMDELS------------EERRLAYVGITRAKRRLYLT 690 Query: 731 YIGRSIQDN--SERFPSVLVQELIDYI 755 Q SE PS + E+ D + Sbjct: 691 RAAVRAQWGRQSEMMPSQFLDEIPDSL 717 >UniRef50_Q027B8 ATP-dependent nuclease subunit B-like protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027B8_SOLUE Length = 897 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 103/710 (14%), Positives = 202/710 (28%), Gaps = 137/710 (19%) Query: 343 LELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 L L+ + + S+ + +++ +REVE + R+L + Sbjct: 209 LTLDEAELGEATLARLGALDFSEEQVRGTRTRNALALIKAPGIEREVEEIARRILRQV-- 266 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 R+I V+V + Y+P ++A + ++ + HPV+ + Sbjct: 267 -EGRPFREIGVIVRAPEIYAPILRATLDRFGIPAR--FYFDEK--LERHPVIRFLAGAMD 321 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + LA+L + A F + + R+ D Sbjct: 322 AMLGGWEHGATLAVLRLAPRFADFGVMD---------------RFDFDVRER-------- 358 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 + R LG E PY E L + L A Sbjct: 359 --------IPRSGLGELRSLLIDEDGQPRPYAE----------RLLHKIDSLAALEEWRA 400 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETE---------AAMTLIEQQWQAIIAEGLGAQYG- 629 E +W + F E + + + + E A +G Sbjct: 401 LELAPRDWAARFATLREIFKPARPADEITHELALQYRSQAAVLDLFDEALDEAAQALHGI 460 Query: 630 DAVPLSLLRDELAQRLDQERISQRF-LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 +PL + L + + V++ + R VV + GM + +P+ Sbjct: 461 RHLPLEDYWRAVKSILRLKPLRLEDGRRNVVHVMSAHEARQWVLPVVFVCGMVEKQFPKF 520 Query: 689 LAPLGFDLMSQKPKRGDRSRR--------DDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 F + + + R ++R LF A+ A +SY + Sbjct: 521 HQQDPFFGDAARCRLNGSGIRVRTAAEFEREERMLFDAAITRATMLATLSYPEFDGR-GE 579 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 PS+ +++L LP ++A+ Sbjct: 580 RNLPSIYLEDL--------DLPAEDAVAVRP----------------------------- 602 Query: 801 SYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTE 860 A S + + + + L+ F P + F Q L++ Sbjct: 603 --APRARTGDSAPVEIRNAQLLEYMRHRTAQLSPTALETFLQCPFQYFTQRFLRLK---- 656 Query: 861 DSEIPDTEPFILEGLSRYQINQQLL-NALVEQDDAERLFRRFRAAGD----LPYGAFGEI 915 PD L+ L++ + +L +E D LF R AA +P G E Sbjct: 657 --TAPDRPEQRLDFLTQGNVVHAVLAEWWLEPQDLAALFERVFAAQLKEKCIPPGYHTER 714 Query: 916 FWETQCQEMQQLA--DRVIACRQPGQSM-EIDLACNG-VQITGWLPQVQPDG-----LLR 966 ++++ D Q + + V+I G + ++ ++ Sbjct: 715 LRNAMLDDLRRFTSEDPWPKIAFRSQIETKFCFPLDDTVEINGRIDRLDTAPDGRTFVID 774 Query: 967 WRPS-------LLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFP 1009 ++ S L A +Q L L + ++ G + Sbjct: 775 YKYSAAQRVKDKLKDASLLQAPLYMLAAQHLNLDAAGMYYVGVKGGIEYA 824 >UniRef50_Q2J6E3 UvrD/REP helicase n=4 Tax=Actinomycetales RepID=Q2J6E3_FRASC Length = 1130 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 122/750 (16%), Positives = 208/750 (27%), Gaps = 102/750 (13%) Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 +L L N A + RP + S EV + +L ++ D Sbjct: 392 RLLRLANTVAAQLRARHRVVELRPRPDVADQGEAVVALHVSWADEVAWIAGQLRRVV--D 449 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 P DI V+V I A+F +A LP + P + +++L + Sbjct: 450 AGTAPGDIAVLVRA----RGDIPALF-TAMQAAGLPVEVVGLTGLLIVPEVAEIVAMLEV 504 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 DS + ++ LL P + + L L + E+ + P Sbjct: 505 LDSPTANAALVRLLTGPRVR----LGPRDLAALGRHAREA-------ARVPDPVGDPDLP 553 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL-IAELVGHLASLLMQLNIWRRGLA 579 + + A D+ A + L ++ R Sbjct: 554 GRS-----DPLAEAVADVDPADVVALSDVLDDPGPQMSAPGRARVRRLAAEIAALR---- 604 Query: 580 QERPLEEWLPVCRDMLNAF---FLPDAETEAAMTLIEQQWQAIIA-EGLGAQYGDAVPLS 635 E L + ++ A A ++ A + L Sbjct: 605 -GHVGEGLLDLLHRVVATIGLDVELTATEVAVRARRQENVAAFLDVAAGFTDPDGTNSLP 663 Query: 636 LLRDELAQRLDQER---ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L + ER ++ A + + T+ + + ++VV + + V+P Sbjct: 664 AFLGFLRAAREHERGLDVAGPSGADAIALMTMHRSKGLEWEVVAVPNLTSKVFPDLTVRD 723 Query: 693 ----------------GFDLMS----------QKPKRGDRSRRD-DDRYLFLEALISAQQ 725 DL + + R + ++R L A+ A+ Sbjct: 724 QWTTSPGVLPIPLRGDADDLPAFTVCAEKAALDAFRADARQYAEREERRLAYVAVTRAKS 783 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 L+ S + R SV + EL ++ L A E A Sbjct: 784 LLFASGHWWGPTQKTPRGASVFLDELAEHARTGGGLVDVWAPEPAERTNPALATPERFAW 843 Query: 786 RMPFDPQNY------QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQR 839 +P++P+ Y G A +P AS P T E V L L R Sbjct: 844 PIPYEPEPYARRLAAAEGVMARLAALSVPGASAEPAGEPFVDGPAGMTAAERVLLAELDR 903 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIP-------------DTEPFI---LEGLSRYQINQQ 883 R D +P D E F + L R + Sbjct: 904 ----EARLLLAEERAARLARTDVALPASLTASQIVRLRADPEAFARELVRPLPRRPVAAA 959 Query: 884 LLNALVEQDDAERL-FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP-GQSM 941 E +R DLP A E+ + Q R+P Sbjct: 960 RRGTRFHAWVEEIFDYRALIDTEDLPGAADAELTDDDLRSLQQAFLRTAYGARRPFAIEA 1019 Query: 942 EIDLACNGVQITGWLPQVQPDG-----LLRWRPSLLSVAQGMQLWLEHLVYCASGGNGES 996 +L G + G + V G ++ W+ QL + L + G S Sbjct: 1020 PFELRLAGRIVRGRIDAVYDLGGGRWEVVDWKTGRSDADDL-QLGIYRLAWARLRGVDPS 1078 Query: 997 R-----LFLRKDGEWRFPPLAAEQALHYLS 1021 L++R R P L+ E+ L+ Sbjct: 1079 AVDAAFLYVRTGAVVRPPTLSEEELADLLA 1108 >UniRef50_D2RKU2 ATP-dependent nuclease subunit B-like protein n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKU2_ACIFE Length = 1003 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 95/676 (14%), Positives = 185/676 (27%), Gaps = 131/676 (19%) Query: 311 IYLLSDLES--SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 + LL L E+ F D L + +L V E Sbjct: 201 LRLLKALGRCCPVEMGLFYDPKRPELSQVTEKIYGDLLGDGFQPVPEEPVKDKPEDLAAL 260 Query: 369 PLD-----------SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + I S ++E+ + + L++ + P +I+V+V + Sbjct: 261 AREWKPGAKCGLAADHIHLGEGASQEQEIRLALTSIKERLQD--GVQPEEILVLVRKLQD 318 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 Y +++ F LP L Sbjct: 319 YQGLVRS-FAQYGIPCRLPLPAD---------------------------------LKSQ 344 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR---MLLG 534 L +L + + +G +W + + L R M L Sbjct: 345 PLP----------DFLTKLLAAAGEKWDL----------------SLWQALFRCPLMELL 378 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 + + ++ Y S+G V + L Q+ E W + Sbjct: 379 FQTDRENLDFLYTQAYFSSAGAFLAHVRRKELVSAGFWDLVDFLQQDHTPEAWRDGLTEW 438 Query: 595 LNAFFLPDAE----------------TEAAMTLIEQQWQAIIAEGLGAQYGD-AVPLSLL 637 L+ + L + + +++ A+ L + Sbjct: 439 LDRWQLARTWGQLHKEGKVDLDQVKLLAGTEDFVRKTLDSLVKTWEQCGEEKSALGLDKI 498 Query: 638 RDELAQRLDQERISQRF-LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL---- 692 R L Q + + + ++ F V +LG+ +G++P Sbjct: 499 RTFWKDSLAQASLPLTPGEPRGIPVREAGEIQGAAFPYVYILGVREGMFPAVKRESWLYS 558 Query: 693 -----GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 + + + R+ D DRY F A A ++L++S+ S ++ S Sbjct: 559 DQERAELNALGLELSLTARA-LDTDRYFFGSAAALASRELHLSW--YSDEEGGA---SPY 612 Query: 748 VQELIDYIGQSHYLPGDEALNCDE--SEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 + L + + D S A + L P + + ++ Sbjct: 613 ITGLDHFYAPDSLPVTVYEADPDRCASPALLTNCLAEQEWLGPREKETLLAAVGTDFSDR 672 Query: 806 WLPAASQAGKAHSEFVQPLP--FTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE 863 A + + S + +P P + +L F P A ++ E Sbjct: 673 TQSARRRWEEPDSPWNGTVPGVVKKPLHLSASSLDAFLQCPFAALVSRVWKLVPWEEQEP 732 Query: 864 IPDTEPFILEGLSRYQINQQL---LNALVEQDDAERL-----------FRRFRAAGDLPY 909 P P ++ L + L L +E D E L F RF G +P Sbjct: 733 WPA--PDVVGNLLHQTLAAFLGNHLQTGLEAKDREILEQELEQVYQGIFDRFHQEGKIPD 790 Query: 910 GAFGEIFWETQCQEMQ 925 + E +E++ Sbjct: 791 SPLLDHIRERYGKELR 806 >UniRef50_D0JAI1 ATP-dependent DNA helicase n=2 Tax=Blattabacterium RepID=D0JAI1_BLASB Length = 709 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 44/409 (10%), Positives = 128/409 (31%), Gaps = 70/409 (17%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + + S + E + + +++++ +D ++ + + A ++ Sbjct: 307 VKIYSASSEKEEALYVASSIFSIIKKTK-YHYKDFAILYR-----ANMQSNIIEYALKEK 360 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY I + + + ++ L + + E +L +L ++ ++ + Sbjct: 361 NIPYKIYGSISFEKRKEIRDLLAYLRIIVNSNDEESLLRILKKG--------NKKTIKSI 412 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + I +++ Y Sbjct: 413 LDLSKKIRIT------------------------------------VYEIIKNIENYQHL 436 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET--EAAMTL 611 L + L +L+ + +R+ ++ + ++++N D + Sbjct: 437 LILNQKTKNKLKNLISTIEKFRKNTEKKDAFA----IAKEIVNFLLKEDPKNYKNENFQY 492 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 I ++E + + LS +D++ V++ T+ + + Sbjct: 493 ILNNIFCYVSEQKKLKDNGEISLSGFLQYFYLEIDEDMNHDENEENKVSLMTVHLSKGLE 552 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F +V ++G+ + ++P + + + +++R LF AL AQ+K ++Y Sbjct: 553 FSIVFIIGLEENLFPSKSSLDNQ------------FKIEEERRLFYVALTRAQKKAVLTY 600 Query: 732 IGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 + PS + EL +L+ + + Sbjct: 601 ARSRFLWGERKMTLPSRFINELNKNFIDRENQNSISSLSEKKEINSLVN 649 >UniRef50_UPI00016C0C66 ATP-dependent DNA helicase PcrA n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0C66 Length = 731 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 67/434 (15%), Positives = 148/434 (34%), Gaps = 70/434 (16%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS---ITFHVCHSP 382 F + + ++ + +N A + + + + + L + + I +V + Sbjct: 263 FEKDFENTTIIKLEQNYRSTKNILEAANAVVKNNENRKPKVLFTDNETGEQIELYVVKNE 322 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISD 441 RE +V+ ++ L E +D ++ Y Q+ V +PY + Sbjct: 323 YREADVIAAQISKDLSEYR-RDYKDFAIL------YRTNAQSRVLEEKMIQSSIPYRMLG 375 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 ++ +S L + + ++++P + I + ++Q N+ Sbjct: 376 GVRFYERKEIKDLVSYLKIIVNVQDDVAARRIINIP----KRGIGAASIDKIQQAANDY- 430 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 ++ ++ +FG+ E V Sbjct: 431 -----------QVNFYEVAKNIRQFGI------------------------LGKTATEKV 455 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN-AFFLPDAETEAAMTLIEQQWQAII 620 A+L+ +L + LAQE + L + FL + E E A I + + Sbjct: 456 SVFANLIEEL----KELAQEENILALLQAIIVKTDYNNFLKETEPEDAADRILNVREFVS 511 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 Q + L+ +E+ D + Q + V + TL + + F VV + G+ Sbjct: 512 KAAAYVQSNEEANLNNFLEEITLVADVDNYDQN--SNAVVLMTLHSSKGLEFPVVFMPGL 569 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN- 739 +G++P ++ D+++ +++R L + A++KLYI + Sbjct: 570 EEGLFPSHMSASDE----------DKTKLEEERRLCYVGITRAREKLYILQAEERMTYGQ 619 Query: 740 -SERFPSVLVQELI 752 PS + EL Sbjct: 620 IKAVEPSRFIAELP 633 >UniRef50_C7HSP4 Putative uncharacterized protein n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HSP4_9FIRM Length = 1119 Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats. Identities = 72/590 (12%), Positives = 189/590 (32%), Gaps = 57/590 (9%) Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 LE EN + ++ E N + +I S E+E + ++ E Sbjct: 265 LEKENELLDIKHLYENFEKYNPQIYQEKTENINLVESISSTNEIENSSLIIEKLIREGH- 323 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 +I +++A+ D Y ++ +F + +P + + + +L+ ++S++ L Sbjct: 324 -RYSEISLVLANSDEYENLVKRIFARSE----IPIFVDKTKKLSDNHILKTWLSMIRLVV 378 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 F D+ A + V+ + E L + ++ I+ + D+ + ++ Sbjct: 379 FNFRKTDLEAFIRSNVIDFGENAYERILD-FQNYIENRKIKGAMIFDDKYFVLDEKFYEN 437 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 + + + S + +L + + E + L+ ++ + Sbjct: 438 DEKLKKEKEDELKNVNSIRKILFDLLY--DLYKIRNEKIKA-NDLVKEIYKSFDKKIIKS 494 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 + R+ F + + ++ + + L + + Sbjct: 495 GFNHYQENIRENRLEIFEENK-------QVWDKFLTNLEQIATILSDSPTKLKKIYKLIE 547 Query: 643 QRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 I A V + R K+ +GM D +P ++K Sbjct: 548 NSCKATSIGIIPPAIDQVLVGDFSRDRINDRKIKIFVGMTDIYFPGNNNSEMLISENEKT 607 Query: 702 KRGD--------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 + + ++DD L L + ++ QK+ SY + ++N + + ++I+ Sbjct: 608 ALENEGIDLKIYKEKKDDKIILNLLRMFTSSQKIIFSYSLIN-KENDPMNRATSISDIIN 666 Query: 754 YIGQSHYLPGDEA-------------LNCDESEARVKAHLTCLHTRMPFDPQN--YQPGE 798 Y ++ L + +K + F ++ Sbjct: 667 IFPNISYKKIAQSKFDFIKYSTDLLDLKAFQILWNIKNKEDTKKSEKEFVKSYLKFKKDN 726 Query: 799 RQSYAREWLPAASQAGKAHS--EFVQPLPFTLPETV------PLETLQRFWAHPVRAFFQ 850 ++Y + K + L + + + + ++ + P + F Sbjct: 727 IENYNYSKNSSYDLFLKGFTYSNDKNLLTPEISKKLYDKNKFSVSEIETYAKCPYKYFIN 786 Query: 851 MRLQVNFRTEDSEIPDTEPFILEGLSRY---QINQQLLNALVEQDDAERL 897 L+ D + + + Y I+++L++ +++ D E+L Sbjct: 787 YGLRAKENKN----LDVDNLEIGNIVHYNMENISKKLIDMDLKEVDDEKL 832 >UniRef50_UPI0001AF5A75 exodeoxyribonuclease V, gamma subunit n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF5A75 Length = 249 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 34/237 (14%) Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ-----SMEIDLACNGVQITGW 955 +A+G LP FG + + + + R ++ I + +GV I GW Sbjct: 15 LQASGLLPLAGFGTSMQDELIEPLPDVLKRYHDLLTLWPETLSSALPISFSHSGVSIDGW 74 Query: 956 LPQVQPDG-----LLRWRPSLL------SVAQGMQLWLEHLVYCASGGNGESRLFLRKDG 1004 L + +G L+ P+ + + ++ W+ HLV CA S + D Sbjct: 75 LGGLHRNGSGELLLVTAIPNSIGSKKTRKWHRLIRPWVNHLVACA-CELPLSTALVASDE 133 Query: 1005 EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTL 1064 P+ A+ L+ L+ + GM PL V ++ AWL Sbjct: 134 TLMLEPMERTAAVSTLNHLLMAWLHGMQRPLPVAVKTAFAWL--------------GQPA 179 Query: 1065 QKARTKFLQAYEGN-MMVRGEGDDI-WYQRLWRQLTPETM-EAIVEQSQRFLLPLFR 1118 KA +AYEG+ GE + R + E + P++ Sbjct: 180 DKAEAAARKAYEGDGQTTDGERRESTALARQFPDFDALMESEEFAGWCETLYKPIYD 236 >UniRef50_A5GQG6 UvrD/REP helicase n=18 Tax=Cyanobacteria RepID=A5GQG6_SYNR3 Length = 784 Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats. Identities = 71/443 (16%), Positives = 127/443 (28%), Gaps = 88/443 (19%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 I+ C E E + R+ + P L+ + V+ Y Q+ + Sbjct: 370 ISLTRCDDEIAEAEAVVHRMRMLDAAHPELSWGSMAVL------YRTNAQSRAIEESLVR 423 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY + ++ ++ L L + S +L +++VP R I + ++ Sbjct: 424 WRIPYVVVGGLRFYDRREIKDVLAYLRLLINPADSVSLLRVINVP----RRGIGKTTIQR 479 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L N+ I W V + Sbjct: 480 LNDAANQLAI---------------------------------------PLWDVVSDGEA 500 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLE------EWLPVCRDMLNAFFLPDAETE 606 L L +N R P E E R+++ E Sbjct: 501 VRSLGGRSAKGLLQFCELINGLREQAQVAPPSELIQQVLEKSGYLRELITEATDEAEERR 560 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + + E + L A D + A V + TL Sbjct: 561 RNLQELVNAALQYQEE------NEEGDLEGFLASAALASDADSKDTA--ADRVTLMTLHS 612 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F VVCL+G+ G++P D + +++R L + A+++ Sbjct: 613 SKGLEFPVVCLVGLEQGLFPS------------YRSLDDPASLEEERRLCYVGITRAKER 660 Query: 727 LYISYIGRSIQDN---SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 L++S+ PS+ + EL + + Q + S L Sbjct: 661 LFLSHASERRLWGGMREPAVPSIFLAELPEALVQG---------DIPRSGGAALRREQRL 711 Query: 784 HTRMPFDPQNYQPGERQSYAREW 806 D QP R S AR W Sbjct: 712 ERLTRVDRAEAQPKARVSAARSW 734 >UniRef50_Q11Q08 DNA-dependent ATPase I and helicase II n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11Q08_CYTH3 Length = 1041 Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 70/494 (14%), Positives = 143/494 (28%), Gaps = 106/494 (21%) Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 H S ++E LH + + ++ V+ + I+ R Sbjct: 392 ELHEEASVVEQLEKLHHEGVDL---------SEVAVIYRKHSKVADIIK-----VLEKRK 437 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVS-----EDVLALLDVPVLAARFDITEEG 489 +P I P ++ I +L+ E + L+ F+I Sbjct: 438 IPLNIKQSINVLHLPFVQNLIDILAYIQKENEYPDSGEEQLFRLMHFEY----FNIDPTD 493 Query: 490 LRYL----RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 + + R+ S IRW + ++ EL H+ L ++E+ WQ Sbjct: 494 IANISRKTRRTSESSAIRW--RELMSKKEELAKLNLHSLPSIL-------SLEANLTYWQ 544 Query: 546 SV---LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 + I G L+ ++ + W F + Sbjct: 545 KEFHNITLQVLFEKITTRGGILSWIMNS------------SEKTWYMQVLTTFFDFLKEE 592 Query: 603 AETEA--AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 ++ Q ++ + + VN Sbjct: 593 TARNPLLSLKEFLSTIQKMLDNDVRLNLQKIIHAEK---------------------GVN 631 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL-GFDLMSQKPKRGDRSRRDDDRYLFLEA 719 T + + ++ V L+G N + Q GF + S + + + +D+R LF A Sbjct: 632 FVTAHSSKGLEYRYVFLIGCNSRQWEGQAERSFGFKIPSTITENVEHDKEEDERRLFYVA 691 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 L A++ LYISY + + + E S + EL E + + Sbjct: 692 LTRAKEYLYISYPAKDVNE-KELVCSRFLVEL------------TEQETTKTTFVSLSDD 738 Query: 780 LTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQR 839 + Q +P +L ++ + + + L + Sbjct: 739 AIVQYKLDIL--QFTEPPVIPLIDAVYLTELLESYQ----------------LSVTHLNK 780 Query: 840 FWAHPVRAFFQMRL 853 + + P+ +F+ L Sbjct: 781 YLSCPIAFYFENML 794 >UniRef50_B2RKD8 ATP-dependent DNA helicase n=5 Tax=Bacteroidetes RepID=B2RKD8_PORG3 Length = 765 Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats. Identities = 54/395 (13%), Positives = 121/395 (30%), Gaps = 67/395 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 I C S E + D ++ D ++ Y Q+ VF A Sbjct: 323 IRLTGCLSGYLEAYTVADSIVER-RMQEYCPYSDFAIL------YRTNAQSRVFEEALRK 375 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +P+ I + S ++ ++ L + E + +++ P + I + L Sbjct: 376 HNIPFRIYGGLSFYSRKEIKDVLAYFRLIVNPNDDEALRRVINYP----KRGIGDTTLSR 431 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L + + R D + + P + Sbjct: 432 L-NEIATASSRSLWDVLSESQKGFP----------------------------------D 456 Query: 553 SSGLIAELVGHLASLLMQLN--IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 S +G SL+ +L + Q + + + ++ + + + + Sbjct: 457 LSATARRRLGEFVSLIRELQESEYESLYEQAADVVKRSGISAEIFSDKSIEGISRQENLK 516 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 + + + L +E+ DQ+ V + T+ + + Sbjct: 517 ELLNGIEEYGTSYAEERGEKP-SLGTFLNEVVLLTDQDTEGVV--GDYVTLMTVHAAKGL 573 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 FK + ++GM + ++P + L +++R LF A+ A++ +IS Sbjct: 574 EFKHIFIVGMEENLFPSMMNATEQGL-------------EEERRLFYVAITRAKESCHIS 620 Query: 731 YIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPG 763 + ++ PS +QEL D + Sbjct: 621 FAAERSRNGRTERSRPSRFLQELDDAYVERRVPQE 655 >UniRef50_Q3DPK7 Exonuclease RexB (Fragment) n=3 Tax=Streptococcus RepID=Q3DPK7_STRAG Length = 319 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 114/356 (32%), Gaps = 52/356 (14%) Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 + + L + +DI+V++ D+DSY + +F +PY +H Sbjct: 1 MARAIRQKLYQ--GYRYKDILVLLGDVDSYKLQLSKIFEQYD----IPYYFGKAETMAAH 54 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 P++ SL + RF +EDVL L + I+++ L Y +++ + I+ Sbjct: 55 PLVHFMDSLSRIKRYRFRAEDVLNLFKTGIYGE---ISQDDLDYFEAYISYADIK----- 106 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 P + G + LG Q + + ++ + Sbjct: 107 -------GPKKFFTDFVVGAKKFDLGRLNTIRQSLLTPLESFVKTKKQDG---------I 150 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA-MTLIEQQWQAIIAEGLGAQ 627 LN + L Q D L+ +E E + + + I+ + Sbjct: 151 KTLNQFMFFLTQVG--------LSDNLSRLVGQMSENEQEKHQEVWKTFTDILEQFQTIF 202 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 + + L L + Q V + + + + V LGM +P Sbjct: 203 GQEKLNLDEFLSLLNSGMMQAEYRMVPATVDVVTVKSYDLVEPHSNQFVYALGMTQSHFP 262 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRD------------DDRYLFLEALISAQQKLYIS 730 + ++ D + D + + L +A+Q+L ++ Sbjct: 263 KIAQNKSLISDIERQLINDANDTDGHFDIMTQENLKKNHFAALSLFNAAKQELVLT 318 >UniRef50_A4XBE9 ATP-dependent DNA helicase PcrA n=18 Tax=Actinomycetales RepID=A4XBE9_SALTO Length = 795 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 64/400 (16%), Positives = 118/400 (29%), Gaps = 74/400 (18%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYL 435 +V + E + + + L +D P D+ V Y Q+ VF L Sbjct: 353 YVADTEHTEADWVAREI-DRLVDDGDTRPGDVAV------FYRTNAQSRVFEEVFIRVGL 405 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY + + ++ L + + + +L+ P R I + + Sbjct: 406 PYKVVGGVRFYERKEVRDALAYLRALVNEDDTVSLRRVLNTP----RRGIGDRAEACVEA 461 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + I +G L R ++ G Sbjct: 462 LASRDRISFG--------------------AALRR-------------------ARDAPG 482 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEE---------WLPVCRDMLNAFFLPDAETE 606 + +A + L+ R P E +L + L+ + Sbjct: 483 ISTRAANGIAEFVALLDGVREVAETSAPEEVLEALLNRSGYLTELEESLDPQDAGRVDNL 542 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + + +++ + V L + L DQ G V + TL Sbjct: 543 QELVSVAREYTERVEGLGEEGERATVAGFLEQVALVADADQLPADDPEHQGVVTLMTLHT 602 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F VV L GM DGV+P GD +++R L + A+Q+ Sbjct: 603 AKGLEFPVVFLTGMEDGVFPHART------------FGDNHELEEERRLAYVGITRARQR 650 Query: 727 LYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGD 764 LY+S + PS ++EL + + G Sbjct: 651 LYLSRAVTRSAWGQPAYNAPSRFLEELPAELVRWERTEGS 690 >UniRef50_C0QS88 Putative uncharacterized protein n=1 Tax=Persephonella marina EX-H1 RepID=C0QS88_PERMH Length = 921 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 88/633 (13%), Positives = 199/633 (31%), Gaps = 91/633 (14%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I F V + E+ + +L + I V++ D+ SY I++VF Sbjct: 249 IKFIVSKGKRDEIVKIAKSILKI---KENTRWYKIGVVINDLGSYLKDIKSVFQEY---- 301 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY +S+ + L SL ++ F D+L + +L +I + + Sbjct: 302 NIPYYLSEENRFIDQLPFKKMFLLFSLKENNFSKIDLLNSISKEIL----NIDDIDISSF 357 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + + E +++ G ++ + + G Sbjct: 358 EKDLIE----------------------NSYEEGYESIIKLLSDKGYNGIID-------- 387 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 L + + + L + + D++ FF + TE + ++E Sbjct: 388 -----------------LLRSIKKIPERGSLNDLIQNYTDIIERFFKKNEHTEKFLNILE 430 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 I + + + S L L++E I +R V I T I F Sbjct: 431 N----IQLNHVLKKLYPEITYSEFNSILLHYLEEEDIDRRLKGDIVQIRTPNISEGIIFD 486 Query: 674 VVCLLGMNDGVYPRQLAPLGF---DLMSQKPKRGDRSRRDDDRYLFLE--ALISAQQKLY 728 + + MN+G YP + L + ++G + ++ ++ + +Y Sbjct: 487 YLFFVDMNEGKYPSIIKDDPVINNTLRVKLEEKGLPKLNASYWQQIITFISIFNSSKNIY 546 Query: 729 ISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP 788 ISY R + ++ PSVLV+EL+ Y + L ++ E L Sbjct: 547 ISYKNRDDK-GNDLSPSVLVEELLRLNYGRSYFENGDTLKLEDPEEITTLKEFRLKN--A 603 Query: 789 FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAF 848 N ++ + + + + LQ F P R F Sbjct: 604 AHLINTDNLLKKVVEAHIKRESEYITEYEGYVNVNPKYIK---LTPSKLQTFSDCPYRFF 660 Query: 849 FQMRL-----------QVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL 897 + ++ E + I + F+ + + +++ + ++ L Sbjct: 661 LSSVINPDTFEIVDTERIPPDKEGTAIHEILEFVYRKRIKDKSRLRMIIPALVKEKFRPL 720 Query: 898 FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA-CRQPGQSMEIDLACNGVQITGWL 956 + + + + + + + + +R+ M+ + G + TG + Sbjct: 721 LEELKPSARIFEEKRVLLLSDILTEFVIKDLERIRNIYIPEVIEMKRSVNIYGFKFTGKI 780 Query: 957 PQVQPDG------LLRWRPSLLSVAQGMQLWLE 983 + D + ++ + + L+ Sbjct: 781 DRADRDLKNGKYIIYDYKTGKKRIDDLRKALLK 813 >UniRef50_Q6MI36 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MI36_BDEBA Length = 762 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 55/408 (13%), Positives = 127/408 (31%), Gaps = 70/408 (17%) Query: 355 IEEFSRSDNKRPLDPLD--SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 I+ S+ +K D I + E + + +M+ E + D + Sbjct: 303 IKNNSQRKDKTLFTSNDPGDLIHVREEKNEYEEGRFVAKTIQSMMNEGEG-SYNDYAI-- 359 Query: 413 ADIDSYSPFIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 Y Q+ V +PY + ++ IS L L + + Sbjct: 360 ----FYRTNAQSRVLEEQLRTMGIPYRLVGGVRFYERMEIKDMISYLKLSINPADDIALK 415 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +++VP I + + + + Sbjct: 416 RIINVPA----RGIGKTTIEKIEE------------------------------------ 435 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 YA +++ E A G + + + ++ + LE + V Sbjct: 436 ---YAAHKNLSMFEAAEKACEERLFNAGTTGKIRRFIDLMKDLQQNAQHLKLLEFFAVVL 492 Query: 592 --RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 + L A ++ A ++ IA+ + + ++ +S L + L + Sbjct: 493 DRTEYLAALKKDESPESQARIENLEELDNAIAQFVQERGEESTLISFLEEM---ALVNDV 549 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 S V + TL + + + V ++G+ + ++P + + Sbjct: 550 DSLDQEQNSVTMMTLHISKGLEYPYVFVVGLEENLFPSARSAESDN----------EQDV 599 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYI 755 +++R L + A+QKL+++Y E+ PS ++E+ + Sbjct: 600 EEERRLAYVGMTRARQKLWLTYAKMRRVWGQEQFNPPSRFIKEIPQNL 647 >UniRef50_UPI0001C314BA ATP-dependent nuclease subunit B-like protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314BA Length = 986 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 89/604 (14%), Positives = 169/604 (27%), Gaps = 117/604 (19%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 D + RA R + D ++ V + E+E++ +L +L Sbjct: 253 DDWYDEAGRAPLHALERGLFEPAAARDAEAGD-AVRLLVAGGERAEIELVAATVLELL-- 309 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE--AFISL 457 + +I V++ + ++ VFG+ +P+ + R + ++ Sbjct: 310 GDGVPGEEIAVVLRTPARSASLVEQVFGAYA----IPHTLDWRVPLAHTALGRGLLALAR 365 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 +L + D+LA L P R ++ L V R L Sbjct: 366 CALLPADARPADLLAYLRTPGRLQRLEL----ADRLELTVR------------RRALLSM 409 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 + W G+ + + A L+G LA L + Sbjct: 410 EEARRAWEEAR----GGWPLRELDRLRGAAA------DGPAALLGALAREARTLFV---- 455 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 + + + A++ + + + + A L Sbjct: 456 --APHRGQARV---------LDAAEEADARALSALLRALEELGELAAAEPRRAAELLE-- 502 Query: 638 RDELAQRLDQERISQRFLA--GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 + L L + +S A G V + + +R+ F V + G+ +G +PR P F Sbjct: 503 PEALLAALGELEVSLGATAREGAVLVADPLAIRARRFDTVIVCGLQEGEFPRPAHPEPFL 562 Query: 696 LMSQKPKRGD---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 + + D+RYLF +++L +S D + PS Sbjct: 563 SDDVRRELNAVAGLRLPLREDALADERYLFYATASRPRRRLILSCRDADE-DGNPALPSF 621 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW 806 V ++ + + L H P + + A Sbjct: 622 FVDDVRALLRE----------------------LPERHR--PLSAVTWPLDAAPTDAERE 657 Query: 807 LPAASQAGKAHSEFVQPLPFTLP------ETVPLETLQRFWAHPVRAFFQMRLQVNFRTE 860 A A + + L E + L+R+ PVR F + LQ Sbjct: 658 RAEALAAPRELPHPIGSLSEAATALLRQREVLSAGALERYARCPVRWFVESELQ------ 711 Query: 861 DSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQ 920 E F + A+ + R A P E Sbjct: 712 ------PERFEPDP-----------EAMARGSCIHSVLERTLARVSWPIAVAELPAIEQV 754 Query: 921 CQEM 924 +E+ Sbjct: 755 VREV 758 >UniRef50_B8GFE8 UvrD/REP helicase n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GFE8_METPE Length = 1019 Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats. Identities = 90/659 (13%), Positives = 187/659 (28%), Gaps = 119/659 (18%) Query: 360 RSDNKRPLDPLDSS-ITFHVCHSPQREVEVLHDRLLAMLEE---------DPTLTPRDII 409 R + + D +T C + E E + + ++ D L RD Sbjct: 311 RREKALFTEKGDGEPVTVAACGNDAGEAEYVAAEIEKLVGTPYHSRQDGGDRPLEYRDFT 370 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 V+ F +A +P PV+ ++ L + D+ Sbjct: 371 VLCRTKAD-----GKKFQAALQRHAIPCEYQANVDFMQLPVVRDMVAYLRIIDN-----P 420 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 ++A + + + I E ++ + N + I+ G D Sbjct: 421 LMAAVPLNRVMKICSIPETVVQKI----NAAAIKRGDD---------------------- 454 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 G ++++ AE VG + +L + + + Sbjct: 455 ---------DDDGVYETMQDAASIVPDHAEPVGEVVRMLAPFIEQKERYTLPELVHAVMM 505 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP-LSLLRDELAQRLDQE 648 + + +T + L + I+ E +P L + L + Sbjct: 506 QASGL---YRSALTDTADMVRLYLATFHEIVLEFDRTTPEATIPGLLQYLELLGAFPVEV 562 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL---MSQKPKRGD 705 Q+ V I T + F VV + + +P + +P F + +++ + GD Sbjct: 563 VREQKEAGDAVQILTAHKSKGKEFPVVFVADLAREKFPLRYSPKRFRVPGDLARGLRTGD 622 Query: 706 RSR---RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL---IDYIGQSH 759 + ++R L A+ A+++LY++Y + ER PS ++EL + + Sbjct: 623 DEKALFVQEERRLLYVAMTRAEERLYLTYAKWYGDNKRERKPSPFLEELNFRENPLITVV 682 Query: 760 YLPGDEALNCDESEARVKAHLTCLHT--RMPFDP----------------QNYQPGERQS 801 P + V+ T L + Y Sbjct: 683 EPPACAPALPVTAGDPVEDLRTSLQEEVVRAVSEMRISTAIQTLVTLEGVREYAEQGTDD 742 Query: 802 YAREWLPAASQAGKAHSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQ 854 + R+ A + + + L +++ L + P++ F + Sbjct: 743 FDRDAFLAKAGSRVGADTRITTLLDPPHQSLIPPNYRFSASALSTYQDCPLQFKFANLYR 802 Query: 855 VNFRTEDS------EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLP 908 V + E + Q L L E E P Sbjct: 803 VPLPRQPQLVFGSTLHSVIEHLTRNPDPSQSLRDQGLALLEEYWSPE------------P 850 Query: 909 YGAFGEIFWETQCQEMQQLADRVIACRQPGQ------SMEIDLACNGVQITGWLPQVQP 961 Y + + L D +A + E + G I G++ +++ Sbjct: 851 YES--KTQESEAHDSASALLDTYLAWQAGNPNTVIGVEKEFTFSFAGHSIHGFIDRLEQ 907 >UniRef50_C7H111 ATP-dependent DNA helicase PcrA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H111_9FIRM Length = 753 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 61/449 (13%), Positives = 144/449 (32%), Gaps = 91/449 (20%) Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 SI + + E E + D++ + E T +DI ++ + +F A Sbjct: 331 SIEVYE--NAHAEAEFIVDKIRQAVAE-EGKTYKDIAILYRNNSQ-----SRLFEEALKR 382 Query: 433 RYLPYAI-SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +PY I S R + +++ + L + ++ F L ++ P + ++ L Sbjct: 383 WDVPYRILSGIRFYERSEIVDML-AYLRVTENPFDDIAFLRCINEPA----RGLGKKALE 437 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 + + E GI + +L + Sbjct: 438 KVASFARERGI---------------------------------------SLFAGLLMDE 458 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA-------FFLPDAE 604 + L A + + + L E V + ++ E Sbjct: 459 CLAELSAAARRGAEEFIKMIKHAQDMLLDENT--RISNVLKYIIETSGYERKLKLADTLE 516 Query: 605 TEAAMTLIEQQWQAIIA-EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 ++A + I + ++ EG A + + LS +E+ L + + A V + T Sbjct: 517 SDAKLENIYELVASVADREGSSAGDDEKLTLSAFLEEI--ALISDVDNHDETADAVVLMT 574 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISA 723 L + + F VV + GM +G++P + +++R L A Sbjct: 575 LHSSKGLEFNVVFIPGMEEGIFPSGQGDDN------------PGKIEEERRLCYVGFTRA 622 Query: 724 QQKLYISYIGRSIQ--DNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE--SEARVKAH 779 +++L++S ++ PS + E+ + + +++ + + + + + Sbjct: 623 KEELFLSAAKWRRHYYEDMYMQPSRFLDEVPEELVKTNVVEASSRDRYTDGYAGDPIASP 682 Query: 780 LTCLHTR----------MPFDPQNYQPGE 798 + P + + G+ Sbjct: 683 FKKIKPVNTVKEKMLTAKPVSEKEFSDGD 711 >UniRef50_A8SUE8 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A8SUE8_9FIRM Length = 789 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 71/481 (14%), Positives = 143/481 (29%), Gaps = 93/481 (19%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 A A I+ +K D+ I+F C + E +++ R+ ++ + Sbjct: 302 LAAANAVIQHNEGRKDKALWTDQDAGEKISFDQCDTEYAEGDLVASRIKTLVRQGVG--Y 359 Query: 406 RDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 RDI ++ Y Q+ V G +PY + + ++ ++ L + ++ Sbjct: 360 RDIAIL------YRTNAQSRVLGEKMVYANIPYRVYGGTNFYARKEIKDVLAYLKVINNT 413 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + +++VP + I E L + + + G+ +D Sbjct: 414 TDNLYFRRVVNVP----KRGIGEASLSKVESFADAYGLS-MMDAAARA------------ 456 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 DE G+ + G + + +R L L Sbjct: 457 --------------------------DEIPGMAVKTSGKIKQFATLIQSFRDMLQDGESL 490 Query: 585 EEWLPVC-------RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 + +++ + + + + E A LS Sbjct: 491 DAVYDRILEDTGYESELIAEHTEESMTRLENIDELRNKVVEFVDENEEAG------LSEF 544 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 +E+ L + S V + TL + + F V + GM D V+P +A Sbjct: 545 LEEI--ALVSDLDSMSEDDNQVKLMTLHSAKGLEFPYVFICGMEDRVFPSGMALNSD--- 599 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP--SVLVQELIDYI 755 D +++R L + A +KLY+S + + S ++E+ + Sbjct: 600 -------DPDALEEERRLCYVGITRAMKKLYLSAARERMMHGNRISSDVSRFIREIPPLL 652 Query: 756 -----------GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 + D D R P + Q SYAR Sbjct: 653 FEHEADMRNMAKRRETESVDRYNRGDLYSDSSYGSSYNYKPRTP-GKEYGQKNPYSSYAR 711 Query: 805 E 805 + Sbjct: 712 Q 712 >UniRef50_Q8EUN0 ATP-dependent DNA helicase n=1 Tax=Mycoplasma penetrans RepID=Q8EUN0_MYCPE Length = 738 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 65/551 (11%), Positives = 159/551 (28%), Gaps = 111/551 (20%) Query: 324 DAFVDVTPDNLLHNIQSD------ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFH 377 + F D+L ++ + IL + N + + N +S I + Sbjct: 276 EVFKKDFSDSLTIVLEKNYRSTKNILNIANSLIQKN---KNRIKKNLYTDSSTESEIIYF 332 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 E + + R+ ++ + +DI ++ + ++ ++ +PY Sbjct: 333 EADDQNLESKFVCTRIKDLV-DSKKYNYKDIAILYR-----ANYLSRNIEEFLSNYRIPY 386 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 I ++ I+ + L + + + + P R I+E ++ + Sbjct: 387 RIFGGFKFYQRKEVKDIIAYMKLIVNSDEVS-LTRIYNTP----RRQISEATYFKIKNYA 441 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 + I + + DE G+ Sbjct: 442 VLNNI---------------------------------------STFAAFKFVDEIEGIQ 462 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN-----AFFLPDAETEAAMTLI 612 + + + R + D++ D E +I Sbjct: 463 TRTKNAVKAFYDSMIEIREKKYGSIS-----EMIDDIVEKTKYYEMLKEDGEEHRTENII 517 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 E + G + L++ + E +Q+ V++ T+ + + F Sbjct: 518 E--LKNASKNFEQNNPGSNINF-YLQELALLTSNDEEENQKNKQDSVSLMTVHASKGLEF 574 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 K+V ++ N+ ++P + +L D++R + A+ A++ LYIS Sbjct: 575 KIVFIIQFNENIFPSIRSLEEGNL-------------DEERRIAYVAITRAKENLYISCC 621 Query: 733 GRSIQDNS---ERFPSVLVQELID-YIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP 788 + + ER PS + E+ D I + H++ Sbjct: 622 NGTSFFGNREMEREPSRFISEIGDALIEKRLITKNQTKFKASTQFNNSNNGSKVDHSK-- 679 Query: 789 FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPV--- 845 + E+ Y E + + + + + +P Sbjct: 680 -----FHESEKTYYVGELIIHDKFGEGIVLNVSGNI-------IDVS-----FKNPQYGK 722 Query: 846 RAFFQMRLQVN 856 ++F + + + Sbjct: 723 KSFLKQHVSIR 733 >UniRef50_A2PDE9 Putative uncharacterized protein (Fragment) n=1 Tax=Vibrio cholerae 1587 RepID=A2PDE9_VIBCH Length = 247 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 17/210 (8%) Query: 916 FWETQCQEMQQLADRV-IACRQPGQSMEIDLACN------GVQITGWLPQVQPDGLLRWR 968 Q+ LA+++ C QP EIDL V + GWL + GL+R R Sbjct: 30 ELAQSAQQALALAEKIGFLCHQPLDDEEIDLRLQPFDDGREVLLRGWLVKRYQSGLVRAR 89 Query: 969 PSLLSVAQGMQLWLEHLVYCASGGNGESRLFL--RKDGEWR--FPPL-AAEQALHYLSQL 1023 + + W++HL ASG + L RK+G PPL A+QA LS+L Sbjct: 90 SGAIRSEDLLAAWIDHLCLAASGKAVTTHLIGYERKEGVQHQMLPPLNDAQQAKALLSEL 149 Query: 1024 IEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRG 1083 + + +GM+ PL P++ A ++ + + +K+ K + + + ++G Sbjct: 150 VALFCQGMNQPLAYFPKTALACVEAGF-----SRGKWQEDEEKSYKKMVDTFNDSFYIKG 204 Query: 1084 EGDDIWYQRLWRQLTPETMEAIVEQSQRFL 1113 EG + + R+W Q + E + + + + + L Sbjct: 205 EGGNRYIARIWPQWSDELAKTLRQLAIKVL 234 >UniRef50_A1AUN0 ATP-dependent DNA helicase PcrA n=10 Tax=Desulfuromonadales RepID=A1AUN0_PELPD Length = 762 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 60/427 (14%), Positives = 135/427 (31%), Gaps = 80/427 (18%) Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 R +P I +H S + E ++ ++++ + ++ V Y Sbjct: 301 RRGKTLWTENPEGEKIRYHRVESDREEARLVAREIVSL--RSRGIPLEEMAV------FY 352 Query: 419 SPFIQAVF-GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 Q+ A LPY I + ++ ++ L + D+ + +++VP Sbjct: 353 RTNAQSRLVEEALVSEALPYHIVGGVRFYARMEVKDILAYLRILDNPADEISLKRIINVP 412 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 I + + Q V SG Sbjct: 413 ----SRGIGGATIDRISQRVASSG------------------------------------ 432 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE------RPLEEWLPVC 591 + ++ S L + +AS + + +R +A + + E Sbjct: 433 ---ASFYAAMAECAGSGLLGSGPRARVASFVDMMERFREMVALRGLPELCQTVMEESGYL 489 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 + + D+E + + + + A LS ++++ D E+ Sbjct: 490 ARLRESRDQEDSERLENLEQLLAAMEEFCEKEPQAG------LSAFLEQVSLVSDLEQGG 543 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 Q + V + TL + + F+ V ++GM + ++P A D M ++ Sbjct: 544 QGKPS--VTLMTLHAAKGLEFRAVFMIGMEERLFPHVRALDDLDGM------------EE 589 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNC 769 +R L + A+++LY+ R E+ PS ++++ + P L Sbjct: 590 ERRLCYVGMTRARERLYLLNTRRRYLFGQEQCNPPSRFLKDIPAGLLDDGGEPSQPGLGF 649 Query: 770 DESEARV 776 + + Sbjct: 650 RSAAEQA 656 >UniRef50_A8SI09 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SI09_9FIRM Length = 1160 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 66/527 (12%), Positives = 140/527 (26%), Gaps = 80/527 (15%) Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 + I V+ DI Y ++ F A +P + + A +LL+L Sbjct: 370 QGVRCGKIAVVCRDISLYRAAVRYEFRMAE----IPLYCDEPTTPEFSAPATAVRALLAL 425 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 ++E + L + D+TE + L + W + Sbjct: 426 LRGADMTEQLTVLAKTGLC----DLTEPEVCALENYA----YTWSPNAA----------- 466 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 WR T+ G+ A+ + + L + + L R Sbjct: 467 --AWRAEFTKSPRGF--GDAELTEEDTQNLTRAENAR----KKLVTAVDTLRGKVR---- 514 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAET--------------EAAMTLIEQQWQAIIAEGLGA 626 E+ L + ++ E Sbjct: 515 SANAEQISRALYFCLKELGAEGQQAVQVEDIRTARGIPAAEEAAREWNVVMQLLDEMARL 574 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 + + D + L + V + + MR V +LG+ +G + Sbjct: 575 LGSQGITVPEYEDLFSLLLRSSDLGHIPQTLDAVVLASAGKMRLDAPDYVFVLGLAEGEF 634 Query: 686 PRQLAPLGFD-------LMSQKPKRGD--RSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 P A G LM+++ D +R ++ F +AL + + L++S+ Sbjct: 635 PCTPAESGLLTHADRDLLMAKQIDLPDCFENRVVREQVCFYKALTAPAKGLWMSWPK--- 691 Query: 737 QDNSERFPSVLVQELIDYIGQSHYLPG--DEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 + ++ +++ + + D A + + + Sbjct: 692 --GQGQTLCAALEPIVEALQPAAPQLELIDLAATPADGLDVLGGGWPLTELERASLTEAL 749 Query: 795 QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE-----TVPLETLQRFWAHPVRAFF 849 + A L + + VQ LP + L++++ F Sbjct: 750 RAPGEGVQAPRGLALLQRMEQDPPRQVQDLPTLETLLGRRLHISPSQLEKYYTCRYGYFL 809 Query: 850 QMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER 896 Q L + R D + +L ++ Sbjct: 810 QYVLGLKPRRRAELSAD---------QSGTLMHWVLQMALDPHPGAD 847 >UniRef50_D2R9Y0 Putative ATP-dependent DNA helicase PcrA n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2R9Y0_GARVA Length = 1023 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 58/387 (14%), Positives = 117/387 (30%), Gaps = 72/387 (18%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPADRYL 435 + S Q+E + + A L + + D+ +M Y Q+ A L Sbjct: 486 YAADSAQQEAAWVAQEI-ARLAGEEGVAYSDMAIM------YRANAQSRSLEDALVKAGL 538 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY + ++ ++ L + ++ +L+VP Sbjct: 539 PYQLVGGTKFYERREVKDALAYLQSMANPDDDVNMRRILNVP------------------ 580 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + G+ +L YA WQ++ + G Sbjct: 581 -------KRGLGARAEA------------------LLTLYAQTQGVSFWQALEHLESIEG 615 Query: 556 LIAELVGHLASLLMQLNIWRRGLA----QERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + L ++ + + + + + +L + +AA Sbjct: 616 MPTRTATKLKEFRELMHNLITCMQNDDSKPSKVIDSILNDSGLLEDLQRSEDPQDAARVD 675 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ-RFLAGPVNICTLMPMRSI 670 Q Q++ AE ++ + A D +++ G V + TL + + Sbjct: 676 NLSQLQSVAAEYEQNTPDA--SVAGFLETTALVADSDQLPDENEDTGKVTLMTLHTAKGL 733 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 + VV L GM G +P A D ++R L + A+Q+LY++ Sbjct: 734 EYPVVFLTGMEQGTFPHSRA------------LEDDGELCEERRLAYVGITRAKQRLYVT 781 Query: 731 YIGRSIQDNSE--RFPSVLVQELIDYI 755 Q PS + E+ D + Sbjct: 782 RAAVRAQWGQAQDMLPSQFLDEIPDNL 808 >UniRef50_C8WQE2 ATP-dependent nuclease subunit B-like protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQE2_ALIAD Length = 1169 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 109/809 (13%), Positives = 222/809 (27%), Gaps = 115/809 (14%) Query: 211 VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFE 270 +++ G A P Q + AL + + ++ W D + S Sbjct: 212 LYLDGFHAFSPAERQFISALARRAKRLVIT-------WED--TGLEGERWEALLEEASSP 262 Query: 271 DRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY-IYLLSDLESSQELDAFVDV 329 L + + F+S+ + LL + RD+ L + A Sbjct: 263 AAWPHLSVWVDAHEEHFSSESQAVAAYHLL----ECARDFAQVSLDQAFCRMPIGATEGR 318 Query: 330 TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVL 389 + L ++ + + E+ + Sbjct: 319 FGASPLVYLERALAGHAPEQPI--------------------RGVRVSAFGDRAEELCAV 358 Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 D + ++ + + PRDI V V +D I R +P +I HP Sbjct: 359 ADEIAHLV-QHERVRPRDIAVCVPTVDG----IGRDLADELEVRGVPVSIDSFATLADHP 413 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 V + + + F + + ALL P++ + E ++ E G+ Sbjct: 414 VGQLLRGAIGAVRTGFDLDTIAALLRCPLVPVKR---REAFDL---YLREHGV------S 461 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 P W F + + + D +I LL Sbjct: 462 GFAAWLAPEP----WAFAARAPRSASGLRDEEADEIRRQLGDALRPVIQAFAQPTLRLLE 517 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 L R + + + A++ + + Sbjct: 518 AARALWELLQAFRVKDALAQSVVQVGDDPMAGV-----IHEQAWSGVTALLDDLATLEPE 572 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 A+P + D + + + R+++ V +C + V ++ +D P + Sbjct: 573 IALPAYEVADLVLESMASLRLTRIPSDVDAVFVCDFARADNWSRPRVFVVAADDASLPPR 632 Query: 689 LAPLGFDLMSQKP-------KRGDRSRRDDDRYLF---LEALISAQQKLYISYIGRSIQD 738 + P G ++ + R+ D+ R L + A + L ++Y Sbjct: 633 VEPSGILRDDERLAFAEVFLRPLGRTSEDERRALECMPYRVMTRASEALVVTYAASEGGI 692 Query: 739 NSERFPS--VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP 796 P+ LV+ + G ++ ++ + L+ +HT PF+ P Sbjct: 693 ERHLAPALASLVER-GHLSIDAARGEGAVPVHPVQAMRLLADALSRVHTGAPFERVTQDP 751 Query: 797 GERQSYAREWLPAASQA-------GKAHSEFVQPLPFT-------LPETVPLETLQRFWA 842 + W A A G H LP P V + L+ + Sbjct: 752 VVQDVLTYMWTGAGDVARFQRVLAGLCHRPRPWRLPAEWIRDLYGDPIRVSVSRLETYAK 811 Query: 843 HPVRAFFQMRLQVNFRTEDSEIP------------------DTEPFILEGLSRYQINQQL 884 R F Q L++ E + L L ++ L Sbjct: 812 CSYRHFAQYALRLEPLALQPEAERNAGTWIHAAVQLATQRLADDHRRLSELGHEELETAL 871 Query: 885 LNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET-----QCQEMQQLAD-RVIACRQPG 938 L + + + ++ + P A QLA ++ Sbjct: 872 LEIAHQALEQAAQDTKLQSTLERPDVAVYVEERRRHFEFVVRAIWMQLARGQMRPLWLEK 931 Query: 939 QSMEIDL---ACNGVQITGWLPQVQPDGL 964 + ++D+ V + G + +V Sbjct: 932 EFRDVDMGAWNGVRVVLDGRIDRVDRLEQ 960 >UniRef50_C5NYN7 ATP-dependent helicase PcrA n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYN7_9BACL Length = 727 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 50/423 (11%), Positives = 147/423 (34%), Gaps = 71/423 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I+ + + + E + + ++L + + + +DI ++ + ++ ++ Sbjct: 316 ISVYAASNDKDETDDIAKKILEL--KKEGIDYKDIAILYR-----ANYLSRQMENSCLSF 368 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY + + ++ L++ +R + +++VP + + + + Sbjct: 369 GIPYKLIGSLKFLQRQEVRDLLAYLNVIVNRADEFSLRRIINVP----KRGVGASSMDKI 424 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 ++ + GI L A+++ + Sbjct: 425 DKYAEQYGIS-----------------------------LFEALKNIEAI--------GV 447 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 S I + L +L+ + + R + + E+ E Sbjct: 448 SKKIVTNIKLLTNLIEKYSEVER--------YAIDELIIGIYKDSGYETMLKESNDPYAE 499 Query: 614 QQWQAIIAEGLGAQYGDAV--PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + + I A+ ++ L E++ D + +Q V + T+ + + Sbjct: 500 SRIENISELVSSAKQFSSMNDSLIDFISEMSLTSDSDDENQE---DAVVLSTVHASKGLE 556 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 +KVV ++G+ + ++P ++++ +++R L A+ A+++L++SY Sbjct: 557 YKVVFIMGLEENLFPSIRDAES--------SADEKNKMEEERRLAYVAITRAKERLFMSY 608 Query: 732 IGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 R +Q S + S + E+ + + G + D + + ++ L ++ Sbjct: 609 ANRRMQFGSIKMNKRSRFLDEVPNKLMHFESSFGGSFESTDSNIEQANKFISKLSPKIKI 668 Query: 790 DPQ 792 + Sbjct: 669 SEK 671 >UniRef50_B3E665 UvrD/REP helicase n=1 Tax=Geobacter lovleyi SZ RepID=B3E665_GEOLS Length = 1048 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 76/460 (16%), Positives = 138/460 (30%), Gaps = 60/460 (13%) Query: 413 ADIDSYSPF------IQAVFGSAPADRYLPYAIS--DRRARQSHPVLEAFISLLSLPDSR 464 ++ Y+ I G+ LP I+ R QS ++ + +R Sbjct: 382 PQLEGYATLAHETVAIANRIGALLDAGVLPEQIAVIYRNHSQSEEIIRYLTARGVAVQTR 441 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + +L P++ ++ L + SG R + + +P Sbjct: 442 RRA----DILQEPLILKLMNVLRYLATELER--PHSGERLLFEILHEPWFGVPPL----- 490 Query: 525 RFGLTRMLLGYA---MESAQGEWQSVLPYDESSGLIAELVGHLASL-LMQLNIWRRGLAQ 580 L R+ + A E W+ LP L L L Q L + Sbjct: 491 --ALARLSVEIARQRTEKRPSYWREQLPLRGMDKGQQALFPASDDLHLRQAGETIEELLR 548 Query: 581 ERPLEEWLPVCRDMLNAF-----FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 + + ++ L E + L+ + + E L+ Sbjct: 549 DAATMTLQELLHHVITRLGILAQALSAHERVWHLELLNTLFDFVREETAKQPLSLPELLA 608 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 +L D Q + + VN T + + F V +LG GV+ + Sbjct: 609 MLADMQRQGISLAVEKLSYTGAGVNFLTAHGSKGLQFDHVFMLGCTRGVWDSASRNRTYS 668 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 + S ++ R LF A+ A+++L IS+ R ++ E S V EL Sbjct: 669 MPPTIWSGPAGSEEEESRRLFYVAMTRARKQLVISWPERDNKE-KELEKSRFVAEL---- 723 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 + ++ H+ + F Q LPA A Sbjct: 724 -------------AESGGGSIRQHVLSDDELLAFGNAVLQA----------LPARLPAEL 760 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQV 855 FV L ++ + L + P+ +F L+V Sbjct: 761 IDDAFVDSLLQKY--SLSVTHLNSYLRCPLSFYFNTLLRV 798 >UniRef50_C4Z8S4 ATP-dependent DNA helicase PcrA n=17 Tax=Firmicutes RepID=C4Z8S4_EUBR3 Length = 763 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 64/416 (15%), Positives = 134/416 (32%), Gaps = 74/416 (17%) Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFG 427 D ITF S E + + + ++ + +D V+ Y Q+ +F Sbjct: 312 AGDR-ITFEQLESGFEEADYVARSIARLVRKGEA-RYKDCAVL------YRTNAQSRLFE 363 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 +PY I + ++ ++ L D+ V +++VP + I Sbjct: 364 EKFIAANIPYKIVGGVNFYARKEIKDILAYLKTIDNGHDDLAVKRIINVP----KRGIGA 419 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + + + E GI + ++ Sbjct: 420 TSINKVTDYAIEKGI---------------------------------------DFYTAL 440 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD----A 603 DE G+ A G + +M + + L ++ + + +++ D Sbjct: 441 RYVDEVPGM-ARSAGKIKPFVM----FIQSLRARAEMDSVSQLIQAIIDETGYVDELKAE 495 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 T+ A IE + I Q + LS +E+A D + + + + V + T Sbjct: 496 GTDEAEQRIENIDELINKAVDYEQGEENPTLSGFLEEVALVADIDGLDEN--SDYVVLMT 553 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISA 723 L + + F V L GM DG++P ++ D S +++R L + A Sbjct: 554 LHSAKGLEFPNVYLAGMEDGLFPSYMSITSDD---------ATSEIEEERRLAYVGITRA 604 Query: 724 QQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 ++ L I+ + + S V+E+ + + E ++ Sbjct: 605 KEHLTITSARMRMVRGETQFNKVSRFVKEIPRELMSGEVYEPKRRDDDIERNSQST 660 >UniRef50_A4XKK0 ATP-dependent DNA helicase PcrA n=2 Tax=Clostridia RepID=A4XKK0_CALS8 Length = 714 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 57/411 (13%), Positives = 138/411 (33%), Gaps = 68/411 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPAD 432 I + E + + +++ + P +I ++ Y Q++ F +A + Sbjct: 315 IYLYPAFDEVDEANFVSMSIKNLIQ--GGIKPSEIGIL------YRTNAQSLNFENALSS 366 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY + ++ I+ L L + + + +++VP + I + Sbjct: 367 HSIPYKVVGSLRFYERKEIKDIIAYLRLITNPDDNLSLFRVINVP----KRGIGPSTVEK 422 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 ++ +E GI Y + +G+++ Sbjct: 423 IKVLSDEYGIS------------------------------AYRLLKERGDFE------- 445 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 L ++ L R + +E V L ++ E Sbjct: 446 ---FDRRTYAKLYDFILLLESMRTEAESKSVVEVIELVLDKTKYMESLLSSKNEEDFQRA 502 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 + Q I A + + + L + + +++ + V + T+ + + F Sbjct: 503 KNIEQLISAAAMFEEENEDKSLQNFLNSITLSFEEDDGQKE---DKVMLMTVHAAKGLEF 559 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 +VV L G+ +G++P L+ + + ++ +++R L A+ A++ L ++Y Sbjct: 560 EVVFLTGLEEGLFP---------LLRSEGEIELQNELEEERRLCYVAITRAKRFLVLTYA 610 Query: 733 GRSIQDN--SERFPSVLVQEL-IDYIGQSHYLPGDEALNCDESEARVKAHL 780 S R S + E+ I YI Q + + +S + + + Sbjct: 611 NNRRVFGRFSSRQKSSFIDEIPIKYIQQIYTPLSITKSSGAQSISNTEDGI 661 >UniRef50_B0RA37 Nuclease subunit B homolog n=1 Tax=Halobacterium salinarum R1 RepID=B0RA37_HALS3 Length = 1018 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 91/576 (15%), Positives = 172/576 (29%), Gaps = 92/576 (15%) Query: 344 ELENRAVAGVNIEEFSRSDNKRPLD--PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 ELE +G + S + D P+ + + +P+RE+ + L L Sbjct: 215 ELEPANESGRAFGTITESLYRPDPDTAPVPDGLRWRELPTPEREIRFVARELRTELANGR 274 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 P D+ V+ ++YS +++ F + +P+ + LL+L Sbjct: 275 D--PDDLAVVAPGTEAYSGYVEDTFDTFD----IPHVTTAASQLNQTFAGSVVHDLLNLA 328 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 + +ED+ +LL P++ + + Sbjct: 329 EPDPRAEDLTSLLANPLV---------DI-------------------------VDTDQA 354 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 + R + D+ +A LV L + L L Sbjct: 355 NAVTAAARR----------RDTVSVSPLLDDVDDEVASLVEELLATLEPLRT-------- 396 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL---- 637 +E+ R +++ F +A TE + EQ + + + L+ + Sbjct: 397 DDIEDATETLRRLMDDRFDLEAATEDYASGAEQAVEQRAYDLVDEVLSSFESLAAVNSDL 456 Query: 638 --RDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 + D R+ QR G V + L+ R F+ V L+G+ +P Sbjct: 457 SPLALFTRAFDGVAIRVPQRAAGGHVEVMGLLDARMRSFEKVFLVGLTSEHFPVTPERPA 516 Query: 694 F--DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 F ++ P+ R RYLF L++ +L I+ D S S ++ EL Sbjct: 517 FFEEMTDADPRFDTGDERLRGRYLF-ATLLANVDELTITTPETGD-DESAVVRSPVLDEL 574 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR--MPFDPQNYQPGERQSYAREW--- 806 G D+ + E R A D + P + + R Sbjct: 575 QRVTGIEPEDGVDDRVGSREDLQRRVAATADRRAAVSHAGDRGDLSPEQTKRTDRGLHCA 634 Query: 807 -------LPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRT 859 L + + + P + E ++R+ + + L + Sbjct: 635 DNRGTAGLSEHDGVLEPET-VDEVYPPSEREPYSASRIERYVECGFKFYADEVLGI---- 689 Query: 860 EDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE 895 E PD + L +L E Sbjct: 690 ---EDPDDIEVVPTPLETGSYVHDVLERFFADLQDE 722 >UniRef50_Q8CRT9 ATP-dependent DNA helicase pcrA n=245 Tax=cellular organisms RepID=PCRA_STAES Length = 729 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 64/494 (12%), Positives = 158/494 (31%), Gaps = 75/494 (15%) Query: 304 GKLGRDYIYLLS-DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 G G D +LS + + + F++ + +IL N + + + Sbjct: 254 GWRGADIQNILSFEEDYPEAKTIFLEQNYRST-----KNILNAANEVIKHNSE---RKPK 305 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 + I ++ + + E E + ++ + ++ ++ Y Sbjct: 306 GLWTANSGGDKIQYYEAMTERDEAEYVVKEIMK--HQRSGKKYSEMAIL------YRTNA 357 Query: 423 QA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 Q+ V +PY + + ++ +S L + + + +++VP Sbjct: 358 QSRVLEETFMKSNIPYTMVGGQKFYDRKEIKDLLSYLRVIANSNDDISLQRIINVP---- 413 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 + I + ++ + ++ I D + E++ + + ++ Y M Sbjct: 414 KRGIGPSSVEKIQTYALQNNIS-MFDA--LAEVDFIGLSKKVTQECIS----FYEMIQNL 466 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 + Q L E + + G +R L +E+ +E + + L+ F Sbjct: 467 IKEQEFLEISEIVDEVLQKSG-----------YRDMLDREQSIESRSRL--ENLDEFMSV 513 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 + E L EQ + + D V + Sbjct: 514 PKDYEENTPLEEQSLINFLTDLSLVADIDEADTQ---------------------NGVTL 552 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 T+ + + F +V ++GM + ++P A D +++R + A+ Sbjct: 553 MTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSE----------DDHEMEEERRICYVAIT 602 Query: 722 SAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 A++ LYI+ + + PS ++E+ + + SH + ++ R + Sbjct: 603 RAEELLYITNATTRMLFGRSQSNMPSRFLKEIPEDLLDSHTGQKRQTISPKSQPKRGFSK 662 Query: 780 LTCLHTRMPFDPQN 793 T + Sbjct: 663 RTTSTKKQVSSSDW 676 >UniRef50_Q6GFF2 ATP-dependent DNA helicase pcrA n=81 Tax=cellular organisms RepID=PCRA_STAAR Length = 730 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 70/542 (12%), Positives = 165/542 (30%), Gaps = 98/542 (18%) Query: 304 GKLGRDYIYLLS-DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 G G D +LS + + + F++ + IL A I+ S Sbjct: 254 GWRGADIQNILSFEKDYPEANTIFLEQNYRST-----KTILN-----AANEVIKNNSERK 303 Query: 363 NKRPLDPLDSSITFH--VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 K + H + + E E + ++ + +D+ ++ Y Sbjct: 304 PKGLWTANTNGEKIHYYEAMTERDEAEFVIREIMK--HQRNGKKYQDMAIL------YRT 355 Query: 421 FIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 Q+ V +PY + + ++ +S L + + + +++VP Sbjct: 356 NAQSRVLEETFMKSNMPYTMVGGQKFYDRKEIKDLLSYLRIIANSNDDISLQRIINVP-- 413 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + + + ++ + ++ I D + + + L L ++ Sbjct: 414 --KRGVGPSSVEKVQNYALQNNIS-MFDALGEADFI--GLSKKVTQECLNFYELIQSLIK 468 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 Q + DE +R L +E LE + + ++ F Sbjct: 469 EQEFLEIHEIVDEVLQKSG---------------YREMLERENTLESRSRL--ENIDEFM 511 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 + E L EQ + + D V Sbjct: 512 SVPKDYEENTPLEEQSLINFLTDLSLVADIDEADTE---------------------NGV 550 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 + T+ + + F +V ++GM + ++P + GD ++R + A Sbjct: 551 TLMTMHSAKGLEFPIVFIMGMEESLFPH---------IRAIKSEGDHE-MQEERRICYVA 600 Query: 720 LISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 + A++ LYI++ + + PS ++E+ + + ++H + + Sbjct: 601 ITRAEEVLYITHATSRMLFGRPQSNMPSRFLKEIPESLLENHSSGKRQTIQPKAK----- 655 Query: 778 AHLTCLHTRMPFDPQNYQP----GERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP 833 PF + + ++Q + +W KA E + ++ Sbjct: 656 ----------PFAKRGFSQRTTSTKKQVSSSDWNVGDKVMHKAWGEGMVSNVNEKNGSIE 705 Query: 834 LE 835 L+ Sbjct: 706 LD 707 >UniRef50_Q04T79 ATP-dependent DNA helicase n=6 Tax=Leptospira RepID=Q04T79_LEPBJ Length = 730 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 71/411 (17%), Positives = 127/411 (30%), Gaps = 69/411 (16%) Query: 385 EVEVLHDRLLAMLEEDP-TLTPRDIIVMVADIDSYSPFIQAV-FGSAPADRYLPYAISDR 442 E E H + + ++I + Y Q+ F A + +PY I Sbjct: 325 ESEEAHGVITRIRSAYSYGTEYKNIAI------FYRTNSQSRYFEEALRNLGIPYKIFGG 378 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 ++ FI+ LS+ + S +L +++ P I + G+ +R++ E GI Sbjct: 379 FRFFDRAEIKDFIAYLSVVSNPLDSVSLLRIVNYPP----RGIGDSGIGKIREFSLEKGI 434 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 L A+ + Sbjct: 435 S-----------------------------LLEALGQEDIPLKKAAKSKGKE-------- 457 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L SL L + + L +++ E A Q+ I E Sbjct: 458 -LYSLFSDLIEKVEKSSSPSEIALELLNRSGLVSHLRDEGTEESIARLENLQELVNSIEE 516 Query: 623 GLGAQYGDAVPLSLLRDELAQ-RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 Y L + L Q L + L VN+ T+ + + FK+V L G+ Sbjct: 517 -----YEKNSDSPSLEEYLNQISLITSEEESKELTDYVNLMTVHNAKGLEFKIVFLSGLE 571 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 +G +P ++ GD +++R LF AL A+++L++SY S + Sbjct: 572 EGTFPHSMSLEDSHF-------GD----EEERRLFYVALTRAREQLFLSYCRTSRKFGKV 620 Query: 742 --RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 R PS + E+ + A + + K F Sbjct: 621 EDRIPSRFLSEIPEECFVERVSREHTARSPQGAPLASKTRRIEEKFNSGFS 671 >UniRef50_C1A8M7 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8M7_GEMAT Length = 820 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 52/404 (12%), Positives = 116/404 (28%), Gaps = 66/404 (16%) Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 R R P ++T + E + + + +L + RD ++ Y Sbjct: 323 RRGKTLRATRPAGEAVTLIEALDERDEADFIAETILTRMSRSDLAR-RDCAIL------Y 375 Query: 419 SPFIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 Q+ A R +PY + + ++ L L + E ++VP Sbjct: 376 RTNAQSRAIEDAFRRRNIPYRLIGAVRFYDRREIRDLMAYLKLVANPADDEAFRRAVNVP 435 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + + + + L + G M Sbjct: 436 ----KRGLGDATIALL---------------------------------AEQAIAEGKPM 458 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + + +L+ +L A + L E + V + + Sbjct: 459 LEMATRFDV---LSGMRPAARAALEDFGNLVQRLRTMAVDAAVDELLRELVQVIK-YADH 514 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV-PLSLLRDELAQRLDQERISQRFLA 656 E + + + + PL + L A Sbjct: 515 LRAEGPEGLERIENVREMIAGAAEVVADEGGEVGLTPLDHFLQ--SSTLVAGVDKLDPNA 572 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 V T+ + + F +V + G+ DG++P A D ++ +++R LF Sbjct: 573 DAVTCMTMHNAKGLEFPLVFVCGLEDGLFPLARAAE------------DPAQLEEERRLF 620 Query: 717 LEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQS 758 + A++KLY++ + ++ PS ++ + + + Sbjct: 621 YVGITRAEEKLYLTCAEQRRRNGELMYSMPSRFLEVIKPSLAER 664 >UniRef50_Q0AZZ6 ATP-dependent DNA helicase PcrA n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZZ6_SYNWW Length = 696 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 68/447 (15%), Positives = 136/447 (30%), Gaps = 78/447 (17%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELEN--RAVAGVNIEEFSRSDNKRPLDPLDSSIT 375 + F+ PD+ L ++ + N A V R + + Sbjct: 256 AEPYNIKRFLGDYPDSRLIKLEMNYRSSGNILSAANAVICNNEEREEKQLYTQKGQGEKL 315 Query: 376 FHVCHS-PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADR 433 H C +E + D + +L +D V Y Q+ A R Sbjct: 316 VHFCAGDSFQEARFIADEINQLL-RSENRHFQDFAV------FYRTHAQSRALEEALLYR 368 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY I R ++ ++ L L + +++VP R I E+ L + Sbjct: 369 NIPYHIVGARKFYERKEIKDILAYLRLVSNNNDLLSFERVINVP----RRGIGEKTLGRI 424 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + + E GI + + Sbjct: 425 KAYSEERGI---------------------------------------SLLDVLAEAESI 445 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD---MLNAFFLPDAETEAAMT 610 G+ +++ + L + L E L + + A A Sbjct: 446 PGIGRKMLTAMEDFYGMLKYLTDLVTSGASLMELLEQVIEVTGYIEELKKSKATDAEARI 505 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 Q+ ++++ E L + L+Q + + + V + TL + + Sbjct: 506 ENLQELRSLVVEFEREGGQG------LEEFLSQTALVQESDELDNSDHVLLMTLHGAKGL 559 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 F VV + G+ +GV+P + +++R L + AQ++LY+S Sbjct: 560 EFPVVFITGLEEGVFPS-------------YRSQTAEEMEEERRLCYVGITRAQERLYLS 606 Query: 731 YIGRSIQDNSER--FPSVLVQELIDYI 755 + + ER PS + E+ + + Sbjct: 607 HALSRLLYGYERSNPPSRFLYEIPEEL 633 >UniRef50_C5QUC7 Possible ATP-dependent DNA helicase PcrA (Fragment) n=1 Tax=Staphylococcus epidermidis W23144 RepID=C5QUC7_STAEP Length = 433 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 54/425 (12%), Positives = 137/425 (32%), Gaps = 66/425 (15%) Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAP 430 I ++ + + E E + ++ + ++ ++ Y Q+ V Sbjct: 19 DKIQYYEAMTERDEAEYVVKEIMK--HQRGGKKYSEMAIL------YRTNAQSRVLEETF 70 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 +PY + + ++ +S L + + + +++VP + I + Sbjct: 71 MKSNIPYTMVGGQKFYDRKEIKDLLSYLRVIANSNDDISLQRIINVP----KRGIGPSSV 126 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 ++ + ++ I D + E++ + + ++ Y M + Q L Sbjct: 127 EKIQTYALQNNIS-MFDA--LAEVDFIGLSKKVTQECIS----FYEMIQNLIKEQEFLEI 179 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 E + + G ++ L +E+ +E + + L+ F + E Sbjct: 180 SEIVDEVLQKSG-----------YKDMLDREQSIESRSRL--ENLDEFMSVPKDYEENTP 226 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 L EQ + + D V + T+ + + Sbjct: 227 LEEQSLINFLTDLSLVADIDEADTQ---------------------NGVTLMTMHSAKGL 265 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 F +V ++GM + ++P A D +++R + A+ A++ LYI+ Sbjct: 266 EFPIVFIMGMEESLFPHIRAIKSE----------DDHEMEEERRICYVAITRAEELLYIT 315 Query: 731 YIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP 788 + + PS ++E+ + + SH + ++ R + T + Sbjct: 316 NATTRMLFGRSQSNMPSRFLKEIPEDLLDSHTGQKRQTISPKSQPKRGFSKRTTSTKKQV 375 Query: 789 FDPQN 793 Sbjct: 376 SSSDW 380 >UniRef50_A9ETX5 ATP-depentend DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9ETX5_SORC5 Length = 820 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 69/387 (17%), Positives = 132/387 (34%), Gaps = 62/387 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 I S E + + + ++ ++P +I V Y Q+ V + Sbjct: 333 IDVVAADSEHDEAAWVVECVRELIA--EGVSPNEIAV------FYRIHAQSRVLEEVLRE 384 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY I ++ +S L + + D+ +++VP I + + Sbjct: 385 ARIPYQIIGGTRFFERAEVKNLLSYLRVIANPKSDVDLNRIINVPA----RKIGQSTVDK 440 Query: 493 LRQWVNESGIRWG-----IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L Q + G+ + + V +P R LLG+ + + Sbjct: 441 LIQAADLLGVSLFEAIDPLLEGRVPPSAMPGGQLPPLASAAKRSLLGF-----RDLIHGL 495 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + +S+ A LA + + + L QE +E A E Sbjct: 496 MTEAKSASPSALAEEVLAR-----SGYAKALEQEDSVES---------EARLQNLRELVQ 541 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 ++ EQ+ A E A Y + V L D LA V + T+ Sbjct: 542 SLVDYEQEATAAGDEATLAGYLERVSLVSDVDALADV------------PKVAMMTIHAA 589 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F V L GM + ++P + ++GD +++R L A+ A+++L Sbjct: 590 KGLEFHAVFLTGMEEDLFPFRSQDPN--------RKGD---IEEERRLAYVAITRARERL 638 Query: 728 YISYIGRSIQDNSER--FPSVLVQELI 752 +I++ R R PS + +L Sbjct: 639 WITHAARRAIFGQTRYGLPSRFLADLP 665 >UniRef50_B0TWY9 DNA helicase II n=19 Tax=Francisella RepID=B0TWY9_FRAP2 Length = 742 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 48/381 (12%), Positives = 128/381 (33%), Gaps = 51/381 (13%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + + + + E + + D++ + D + DI ++ S ++ V + Sbjct: 315 VEVYCAVNERDEAKYIIDKIRQL--HDGGVDYSDIAILYR-----SNYLSRVLEESCIYT 367 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY I ++ ++ L L + + +++ P I + L + Sbjct: 368 SIPYRIYGGFRFFDRAEVKDALAYLRLAVTSNDNLAFERIINTP----TRGIGNKTLDTI 423 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R + + + + W+ + ++ + Sbjct: 424 RNFSQINNVSY-------------------WQATID-----------------IIQKEIV 447 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 + A L+ ++ ++ + L+ ++ LE + +L ++ D E + Sbjct: 448 TKRTASLLLKFIEIINAISSQIKDLSLDKLLETVINE-SGLLASYQEKDTEKDRQKIDNL 506 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELA-QRLDQERISQRFLAGPVNICTLMPMRSIPF 672 ++ + + +L+D L+ L+ + V + T+ + + F Sbjct: 507 KELISAAKDFEPQIELLDDNTDILQDFLSFAVLEAGEMQADENTDSVQLMTIHASKGLEF 566 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 + V L+ +GV+P + + + + + ++R LF A+ A + L ISY Sbjct: 567 RYVFLVAAEEGVFPPSSIINAEEAYTSSESKKIQEKLAEERRLFYVAVTRAMKALTISYA 626 Query: 733 GRSIQDNSE--RFPSVLVQEL 751 + S + E+ Sbjct: 627 QVRNIFGRSSFQVKSRFLMEI 647 >UniRef50_D1C5W7 ATP-dependent nuclease subunit B-like protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5W7_SPHTD Length = 1066 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 92/598 (15%), Positives = 168/598 (28%), Gaps = 74/598 (12%) Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 D ++ P REV + + ++ V+ + Y + VF Sbjct: 273 DGTVRLVSAPDPAREVREAARA--CLAWAAEGIPFHEMAVVFRRDEPYRALVDEVF---- 326 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV----PVLAARFDIT 486 + +P + R HP ++LL+L S V+ + A R+ Sbjct: 327 RETGIPVYLYGGRPLAEHPQGRRLLALLALAGSPLRRAAVMEFITETHLPDATAERYG-- 384 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 E+GI G D R L R +LG E + Sbjct: 385 PVEPALWDALSREAGIVEGRDQWISRLSLL--------HQAKRRAVLGEEQEDPERI--- 433 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 DE E + L+ + + + L RD+ + AE Sbjct: 434 ----DERLRTELEAIERLSQFIKDFADQLEARPEHASWQAHLDYLRDLAVTYVDR-AEPL 488 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL--DQERISQRFLAGPVNICTL 664 + + A++ + ++ V L R + L D+ + F V + + Sbjct: 489 LDLLAPLARLDALVPQVSFVRFQRTVRRVLERADAGTVLGPDEVPPNGHFGRDGVAVLDV 548 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD---------DRYL 715 +R + + V +LG+ + +P L ++ + R + + L Sbjct: 549 FSLRFLRLRAVAVLGLAERSFPAPPRQDALLLDRERVRLSAAGRWEIPLRAAGADPEPLL 608 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ-------------ELIDYIGQSHYLP 762 F A+ +A ++L +SY RS D PS + E ID + + + Sbjct: 609 FALAVAAAGERLLLSYP-RSGGDGRTILPSHFFRAAAEALTGRRVGVEDIDSLSRELFTR 667 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP--------------GERQSYAREWLP 808 + T + PQ + L Sbjct: 668 VPTNRFGAATPEEALTAGEYDRTLLALLPQEGAECLARLHPPFARARAAWEARWRGRELT 727 Query: 809 AASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTE 868 + L + L+ + P R F L++ E + E Sbjct: 728 TYDGVLGEAAAAAVARRAGLRRAISPSRLETYATCPFRFFLSYLLRLEPVEEPDLLERIE 787 Query: 869 PFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 L R + +L + + A R R L I E Q+ Sbjct: 788 -----SLERGALVHDVLQRFLTECGANDPPSRVRREAHL--ARLRAIAEEECADREQR 838 >UniRef50_A9F541 ATP-dependent DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F541_SORC5 Length = 685 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 59/419 (14%), Positives = 123/419 (29%), Gaps = 59/419 (14%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 IL++ N +A +S ++ + +C P E + +LE + Sbjct: 271 ILDVANAVLAKSGARRHKKSLIATRVEG--DKVRSIICVDPDVEASFVATEAQRLLEREA 328 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 P+DI V+ S A SA +R +P + + ++ I+ L + Sbjct: 329 A-RPKDIAVLYR-----SNLQAAAIESALKERQIPIRMIGGQQFFERKEVKDLIAYLRVA 382 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 + + +L+ P I + + L + Sbjct: 383 LNPGDEMCLRRILNYPA----RGIGDAAVAKLGAYATAH--------------------- 417 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 W +V L + + LL + R + Sbjct: 418 ------------------DASLWTAVSRPHAVHELTSAAIEGCRQLLRIIEATRARFERG 459 Query: 582 RPLEEWLPVC--RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 P E + + T A + ++ + + Sbjct: 460 EPSAEVARALLADAGFKEDIMAGSSTANAAARRWGNIEGLLNVFARRDEKGKGDRASFAE 519 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG--FDLM 697 L ++ + V + T+ + + F V ++G+ +G+ P Q + D Sbjct: 520 FLRLLALRQDSEEEEATDRVTLTTMHGAKGLEFPYVFVIGLEEGLMPHQRSLDERATDAA 579 Query: 698 SQKPKRGDR--SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELI 752 + GD +++R LF A+ A+ +LY++ R PS + E+ Sbjct: 580 PSGAEGGDTGGHSIEEERRLFYVAVTRARDRLYLTRAKHRGSRGKMVPRTPSRFMLEIP 638 >UniRef50_Q21PD1 ATP-dependent DNA helicase Rep n=15 Tax=Gammaproteobacteria RepID=Q21PD1_SACD2 Length = 672 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 60/414 (14%), Positives = 132/414 (31%), Gaps = 62/414 (14%) Query: 372 SSITFHVCHSPQREVEVLHDRLL-AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF-GSA 429 +I C + E E + +L L +D V+ Y QA Sbjct: 311 ETIRVIKCPTEDAEAERVATEILTQRLRRQ--CKFKDFAVL------YRGNHQARLMELK 362 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY IS + + ++ + L L + L +++ P R I Sbjct: 363 LQHHQIPYNISGGTSFFARAEIKDIMGYLRLIANPADDNAFLRVVNTP----RRQIGTGT 418 Query: 490 LRYLRQWVNESGIR-WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L L ++ E I W D+ + +P + GL R+ W + + Sbjct: 419 LEALGRYSTERDISLWAACDEMGLQALIP-------KQGLERIRKF-------SGWLNSV 464 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + +G + + + + + + + E+ ++ + Sbjct: 465 RSNCHNGDPVQAIREMIDDIDYEGWLHQNASSPKVAEKRFENVNILVES----------- 513 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 I+ + E A + + ++ + L L+++ V + TL + Sbjct: 514 ---IKNSLER--DENEDADGEERINTAISKLLLQDMLERQEEEDE--TDRVQLMTLHASK 566 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F V LLG+ + + P + + ++ +++R L + AQ+ L Sbjct: 567 GLEFPHVFLLGLEEEILPHRNSIEEDNI-------------EEERRLAYVGITRAQRTLT 613 Query: 729 ISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 ++ G Q ++ PS + EL + ++ + L Sbjct: 614 MTLAGTRKQFGEKQTTTPSRFLDELPPEDVEREGFSEATPEQIEKKGKETLSSL 667 >UniRef50_B2GM51 ATP-dependent DNA helicase UvrD1 n=10 Tax=Actinomycetales RepID=B2GM51_KOCRD Length = 818 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 65/425 (15%), Positives = 127/425 (29%), Gaps = 87/425 (20%) Query: 356 EEFSRSDNKRPLDPLDSS-ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 + R D K D + I + + E + + + L+++ + P D+ V Sbjct: 344 QNADRRDKKLWTAEGDGAPIVGYAAENEHEEARFIAEEI-DRLQDEHGIRPGDVAV---- 398 Query: 415 IDSYSPFIQAV-FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 Y Q+ LPY + ++ +S L + V + Sbjct: 399 --FYRTNAQSRSLEEILMRVGLPYKVVGGTRFYERKEIKDAMSYLRAIANPADDITVRRI 456 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 ++ P + I + + + GI ++ + R+ Sbjct: 457 VNEP----KRGIGDRAQGSIAALADREGI--------------------SFSEAMHRL-- 490 Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD 593 P + A + A L+ L +G + LE L Sbjct: 491 ------------DEAP--GLATRSANAIRTFAQLMDDLGELAQGASVTAVLEAVLEQ-SG 535 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 L A + + + A++ E + L + +A D ++I R Sbjct: 536 YLEALRTSTDPQDESRVENLAELVAVVREFEKDRPEA--GLGEFLEHVALVADADQIPSR 593 Query: 654 FLA---------------------GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 G V + TL + + F VV L GM G++P Q + Sbjct: 594 PDTAAEGTASAQQIAQEVEEARDQGVVTLMTLHTAKGLEFPVVFLTGMEHGIFPHQRS-- 651 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQE 750 D S +++R L + A+Q+LYI+ + S + E Sbjct: 652 ----------FADPSSMEEERRLAYVGITRARQRLYITRAESRSLWGQSQFNPASPFLDE 701 Query: 751 LIDYI 755 + ++ Sbjct: 702 IPAHL 706 >UniRef50_A5TXQ2 Superfamily I ATP-dependent helicase n=15 Tax=Fusobacterium RepID=A5TXQ2_FUSNP Length = 737 Score = 125 bits (315), Expect = 8e-27, Method: Composition-based stats. Identities = 61/408 (14%), Positives = 135/408 (33%), Gaps = 77/408 (18%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDP--TLTPRDIIVMVADIDSYSPFIQA-VFGSAP 430 I C + + EV R++ + E+ + RD+ ++ Y Q+ +F Sbjct: 314 IKVLACDNGRDEV----SRIIEFIRENHQNGVPYRDMTIL------YRTNAQSRIFEEGL 363 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 +P+ + + S ++ I+ LS+ + ++ +++VP Sbjct: 364 LRYNIPHKVFGGISFYSRAEIKDIIAYLSIIVNPQDELNLQRIINVP------------- 410 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 + G+ +++ YA E+ +++ Sbjct: 411 -----------------------------KRKVGEKGIEKII-AYARENDLNLLEALSHI 440 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN--AFFLPDAETEAA 608 E SGL A L + + + LA + D ++ + + + A Sbjct: 441 KEISGLTAVGKEKLLEMYDIIKE-LKDLAYTETASYIVQTLIDKIHYIDYINENYDDAEA 499 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 +++ I E + L+ + L + V + T+ + Sbjct: 500 RIENIDEFKNSILELENVVGE--LRLNEYLE--NVSLISATDDLEEKSDYVKLMTIHNSK 555 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F +V L+G + ++P A D +++R L AL A++KLY Sbjct: 556 GLEFPIVFLVGFENEIFPGTRA------------MLDEKEMEEERRLCYVALTRAEKKLY 603 Query: 729 ISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 +S+ +R PSV ++E+ + + D S+ Sbjct: 604 LSHATIRFVYGQDRLSTPSVFLKEIPEKLLDIEVKKERLYFADDYSDE 651 >UniRef50_C5NXT8 Putative uncharacterized protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXT8_9BACL Length = 1281 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 79/617 (12%), Positives = 181/617 (29%), Gaps = 100/617 (16%) Query: 339 QSDILELENRAVAGVNIEEFSRSDNKRPLDPL--DSSITFHVCHSPQREVEVLHDRLLAM 396 + ++LE GV+ + + K D SI + + EV+ + ++ + Sbjct: 318 EYEVLETHRGRFNGVSNDILADKYYKNFTAQYEIDDSIEIMCAKNKELEVKQVAREIVKL 377 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + + +I ++ D +Y ++ +F L + +H +++ Sbjct: 378 --KHNNINQNEIAILYRD-STYENYLN-IFKDY----NLDVHLDKNIETSNHRLVKFIQE 429 Query: 457 LLSLPDSRFVSEDVLALLDVPV---------------LAARFDITEEGLRYLRQWVNESG 501 L + RF +L LL + L +I E+ L ++E+ Sbjct: 430 TLYFDEDRFK-TRLLNLLKTRLTNFENIYRQKAISHVLLGDLNIDEKQLEKDIAELDENM 488 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 I+ D L G++ + L ++ + +++ + L S L + Sbjct: 489 IK---DKFLASNLVNNIGGKYKYSDLLEKVRV-VSIDDLENILNEKLVNMHSDILKDYFI 544 Query: 562 GH---------------LASLLMQLNI--WRRGLAQERPLEEWLPVCRD----MLNAFFL 600 L L+ +++ + L +R +++ + V M Sbjct: 545 EKTTKYTTEQLEICRQVLLELIDKVSDVSAKNNLQAKRYIKKLVDVFNHCKIKMYLDKED 604 Query: 601 PDAETEAAM------TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 + + + + ++ I + + L + Sbjct: 605 GEYDNIEELKIDSIDRQVYKKILEYINDINENFGSEKFEYKKFVTLFNTGLTSIKYRSIP 664 Query: 655 L-AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR------- 706 + + T+ + KVV +LG N V P + D ++ D Sbjct: 665 EINNSIIMSTMDLAKVENKKVVFVLGFNKDVLPVSKSSGLIDDKDKERLISDNIFLSPTK 724 Query: 707 -SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE 765 + D+ ++ A+ AQ+K YISY E F S + + + + Sbjct: 725 EAALIDEEFVAYIAMTRAQEKTYISYSLLDKSF-KENFASPYLNTVRSLFPELEEKQTSK 783 Query: 766 ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 L ++ + +A+ + E Sbjct: 784 ILEFSIAD--------YNYYLENISEIVSTKEFNYLFAKIYRRFMEVKDSKTKEV----- 830 Query: 826 FTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS--------- 876 V +E + +F H + E + + F S Sbjct: 831 -----EVLVELMIKFLEH---YQLTSVHESYENYEVLDELNDRVFFTNDTSIKNYLSKII 882 Query: 877 ---RYQINQQLLNALVE 890 R+Q++ + + +E Sbjct: 883 RDYRFQLSSEYIEEFLE 899 >UniRef50_P57654 ATP-dependent DNA helicase rep n=4 Tax=Buchnera aphidicola RepID=REP_BUCAI Length = 645 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 49/386 (12%), Positives = 131/386 (33%), Gaps = 68/386 (17%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I + + + E + + ++++ + + RD ++ + + A Sbjct: 312 IKVLIGKNEENEAQKIVKKIISQYAK-KKIKYRDFAILYR-----GNYQSRILEKALIKE 365 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY IS++ + S P ++ +S L + +R + + ++++P I + L+ L Sbjct: 366 NIPYNISEKSSFFSRPEIKDLLSYLRVVINRDDNHAFMRIVNIP----SRQIGKTTLKKL 421 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 +W A + +Q+ + Sbjct: 422 EEW---------------------------------------ANKKHVSLFQASNNIEIK 442 Query: 554 SGLIAELVGHLASLLMQLNIW--RRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAM 609 L + + + + ++ + L +++ + L+ F + + ++ Sbjct: 443 KFLNENTIKKIKNFISKIEKFTAWSCLKPSNIIDDIVDDLEYEKWLSKFLKDPNKIKNSI 502 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + Q G + + L + + R + + V + TL + Sbjct: 503 NNVHTLSQWFKNMIKGDDFEKPMTLFQIVTRMTIRDILDDNIIKEQQDRVQLMTLHASKG 562 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V ++GM +G+ P Q + ++ +++R L + A+++L+ Sbjct: 563 LEFPAVFIIGMCEGILPNQKSIDNDNI-------------EEERRLTYVGITRAKKQLFF 609 Query: 730 SYIGRSIQDNS--ERFPSVLVQELID 753 +Y + Q + PS + EL Sbjct: 610 TYCYKRTQYGQILDMLPSRFLFELPQ 635 >UniRef50_Q4JGZ3 ATP-dependent deoxyribonuclease chain-like protein (Fragment) n=4 Tax=Listeria RepID=Q4JGZ3_LISWE Length = 430 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 73/204 (35%), Gaps = 15/204 (7%) Query: 309 DYIYLLSDLESS-QELDAFVDVTPDNLLHNI--QSDILELENRAVAGVNIEEFSR---SD 362 + L + Q +A+ + L+ I + D L LEN+ ++ + ++ Sbjct: 232 EIQKGLEEYSMFKQSTEAYFALLEMAKLNKISVEPDKLFLENKRAKSDSLAFLADVWGNN 291 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 + + H ++ + E+E + + + RD+ ++ +I Y Sbjct: 292 KFVTFEEKPQDLAIHQANNRRAEIEGIAREIRQLTLN--GYRYRDMAILTRNISDYDVLC 349 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV---L 479 + V S +P I +RA HP +E S + + E + + + Sbjct: 350 ETVMESFD----IPIFIDKKRAMAKHPFIEFIRSSIDAILFNWKYEPIFQAVKTEFFFNV 405 Query: 480 AARFDITEEGLRYLRQWVNESGIR 503 + I L +V E+GI+ Sbjct: 406 SENTSIMRRKADILENYVLENGIQ 429 >UniRef50_C4G2S8 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2S8_ABIDE Length = 768 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 55/379 (14%), Positives = 122/379 (32%), Gaps = 67/379 (17%) Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 RE + + +L + E DI V+ ++ S I+ F +PY + Sbjct: 334 REANGVANTVLRTVNEGKA-KYSDIAVLYR-TNAQSRAIEEKF----IYSNIPYKLYGGT 387 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 S ++ ++ L ++ V +L+VP + I + Sbjct: 388 NFYSRKEIKDILAYLKTINNPKDDTQVRRILNVP----KRGIGSATEDKIAD-------- 435 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV-- 561 YA+E +++ + GL + Sbjct: 436 -------------------------------YALEKEISFFEACMRVQSIPGLSRAVAKV 464 Query: 562 GHLASLL-MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ--A 618 + + ++ ++ + + +E + + E + + IE+ A Sbjct: 465 EKFVAFIGAKIREFKDTVCMKAEVEALIEEIGYIEELKLEGTDEAQGRIENIEELINKVA 524 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 I G + + L D + S+ A V + TL + + FK+V ++ Sbjct: 525 IFELGNQDAGDIKLG-NFLADVSLATDADNKDSENKDADKVTLMTLHSAKGLEFKIVFIV 583 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 GM +G++P ++ D + +R + A +KLY+S + Sbjct: 584 GMEEGLFPSRMCLFAMDESELEEERRL----------CYVGITRAMEKLYLSNAASRMLR 633 Query: 739 NSER--FPSVLVQELIDYI 755 + PS + E+ +++ Sbjct: 634 GDVQWNAPSRFIGEIPEHL 652 >UniRef50_B0VGK7 Superfamily I DNA and RNA helicases n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VGK7_9BACT Length = 732 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 54/426 (12%), Positives = 136/426 (31%), Gaps = 79/426 (18%) Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAI 439 + E + D +L + + + R+I V+ Y Q+ VF SA +PY+I Sbjct: 335 NEIEEANRITDAILKL--QRKGIPLREIAVL------YRTNAQSRVFESALIQAEIPYSI 386 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 ++ ++ L + + +E +L +++ P I + + L Sbjct: 387 VGGVQFYQRKEIKDLLAYLYVLSNLNDNESLLRIINEPA----RGIGQTSINRLI----- 437 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 G+A ++ + ++ + L Sbjct: 438 ----------------------------------GFANKTRISLFSAIQNVEAIEELGNP 463 Query: 560 LVGHLASLLMQLNIWRRGLAQE------RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 ++ + L W++ ++++ + + E L + N+ D + Sbjct: 464 AKKRISEFCLMLERWQQSVSRKPALEMVKTIVEELELISHYQNSNDPQDIARAENLVEFV 523 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + + ++ +A + D +R+ + + + TL + + F+ Sbjct: 524 TSVSEFSEHFYQENEREPL-IADYLPYVALQTDLDRVKENM--DSIRLMTLHNAKGLEFE 580 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 V + G+ D + P ++ D + +++R LF + A+ L++SY Sbjct: 581 AVFIAGLEDELLPHRMCMNNQDSI------------EEERRLFYVGITRAKNYLHLSYTK 628 Query: 734 RSIQDNSER--FPSVLVQEL---IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP 788 ++ PS + E+ + Y + ++ + Sbjct: 629 SRRLYDTFYFPVPSQFLTEVDSRLFYHSDGDFGIAQPPKRIKKTNKVITESQKYYKIGQK 688 Query: 789 -FDPQN 793 F P+ Sbjct: 689 VFHPEY 694 >UniRef50_B8I5U1 ATP-dependent DNA helicase PcrA n=14 Tax=Firmicutes RepID=B8I5U1_CLOCE Length = 785 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 54/413 (13%), Positives = 130/413 (31%), Gaps = 75/413 (18%) Query: 375 TFHVCHS--PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPA 431 +C + E + L D +D V+ Y Q+ V Sbjct: 316 KIVICENDNEHEEALYAAREI-QRLIFDEDRKYKDFAVL------YRINAQSRVLEEMFM 368 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +PY I + ++ I+ + L + + + +++VP + I + + Sbjct: 369 REGIPYKIVGGQKFYDRKEIKDIIAYMRLVQNPGDNVSLKRVINVP----KRGIGDTTVE 424 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 +L Y +V+ Sbjct: 425 NAE-------------------------------------ILAY---QGDVSLFTVISNA 444 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC---RDMLNAFFLPDAETEAA 608 E + L + + +N +R + + + + L + +L + L + + Sbjct: 445 EEFPSLKRAAQKLGNFSLMINKFRT-MKEHMTISQMLDMVVEDSGILREYELENTVEAQS 503 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 ++ +++ E + L + L + S + V + T+ + Sbjct: 504 RIENIKELKSVAIEFEKQSEDN--SLEEFLAHI--SLVSDIDSLQEDQDYVVLMTMHSAK 559 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F VV + GM +GV+P G+ +++ P+ + +++R L + A++KLY Sbjct: 560 GLEFPVVFIPGMEEGVFP------GYRAITEGPE-----QLEEERRLCYVGITRAREKLY 608 Query: 729 ISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 +S + PS + E+ + + + + N ++ Sbjct: 609 LSNARFRTLFGNSSYNRPSRFLAEIPEELVEYPFKSTSHTRNTSQNSGSAFKQ 661 >UniRef50_Q2RGX9 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=Q2RGX9_MOOTA Length = 729 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 67/455 (14%), Positives = 129/455 (28%), Gaps = 72/455 (15%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 IL+ N + R +R L + + + E + + + Sbjct: 290 ILQAANAVIQHNEGRREKRLWTRRREGEL---LHLYRATDERDEGRFIAGEVYRR-HQQE 345 Query: 402 TLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 D V+ Y Q+ A +PY I ++ ++ L + Sbjct: 346 GRPFSDFAVL------YRTHAQSRALEEAFIQAGVPYEIVGGLKFYQRKEIKDILAYLRV 399 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 + S +L +++VP R I E L L Sbjct: 400 IANPDDSLSLLRIINVP----RRGIGEATLARLEAA------------------------ 431 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 A + ++ + D G+ A L L+ L+ R+ + Sbjct: 432 ---------------ATSEGESLYRVLERVDTIPGIPARGRQALRELVEMLDNLRQQ-QE 475 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 + + + + +AE + + + + Y P S L D Sbjct: 476 KITVTDLVATILQETGYQAELEAERTPEAQARLENLKEF--QTVTRSYDQGAPESSLGDF 533 Query: 641 LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 L Q V + T+ + + F VV L G+ +GV+P Sbjct: 534 LTQVALVAESDTYSGNAAVALMTMHTAKGLEFPVVFLAGLEEGVFPH------------F 581 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELI-DYIGQ 757 D + +++R L + A++ LY+++ S PS + E+ D I Sbjct: 582 RSLDDPAEMEEERRLCYVGMTRAREVLYLTHAWTRNLYGSTMSNPPSRFLDEIPADLIQG 641 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ 792 L+ E + T + Sbjct: 642 EGTGLRSGVLSRTSEERDDRGRSTRRQPAPARSTR 676 >UniRef50_D0LJZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJZ3_HALO1 Length = 787 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 59/455 (12%), Positives = 124/455 (27%), Gaps = 65/455 (14%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDS--SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 A I + K D SI + C S + E + + ++ Sbjct: 282 LDAANAVIAKNRNRHEKALWTASDGGESILWEPCPSDREEATFIARAIRGLVSA-ENRDF 340 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 D+ ++ + S ++ + I D Q V + L L Sbjct: 341 SDMAILYR-TRAQSRQLEEQLRRFDIHYEI---IGDVSFFQRREVKDIISYLRLLVQPNA 396 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 +++VP I + + +R + + Sbjct: 397 DL-AFERIVNVPA----RGIGKTTVERVRDYARRA------------------------- 426 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSG--LIAELVGHLASLLMQLNIWRRGLAQERP 583 +++ + SG L A L + L ++ R +A Sbjct: 427 --------------ELPLFEAARACADGSGGSLAARARNKLRAFLDIVDGLRDVMAAGAS 472 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 + E + + E + +++ G + SL+ Sbjct: 473 VAEIVIQTVERSGYSAALTKEGTLEAEERLKNLSELVSWGSSFDEEEGEDASLVEFLANV 532 Query: 644 RLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 L G V + T+ + + F VV L G+ +G++P + Sbjct: 533 ALQSSGDKAESGDRGKVKMMTIHAAKGLEFPVVFLCGLEEGLFPSLRERDDQN------- 585 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHY 760 D +++ L A+ A+++L ++Y + + R PS + + D Sbjct: 586 --DGDTLEEEYRLAYVAITRARERLVLTYAMQRMIWGETRSQRPSRFLDSIPDDCLAVRA 643 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ 795 P A + +D + Y Sbjct: 644 EPPPPATTTHYDDYGSTLRRRRRPAADEYDQRVYS 678 >UniRef50_D1BXF2 ATP-dependent DNA helicase PcrA n=5 Tax=Actinomycetales RepID=D1BXF2_XYLCX Length = 896 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 60/384 (15%), Positives = 119/384 (30%), Gaps = 56/384 (14%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPADRYL 435 +V +E + + + L + + P D+ + Y Q+ L Sbjct: 427 YVADDEHQEARFVAEEI-DRLGDSDGVRPGDVAI------FYRTNAQSRSLEEVLVRVGL 479 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY + ++ I+ L + ++ +L+VP + + E + Sbjct: 480 PYKVVGGTRFYERREIKDAIAYLRALANPDDDVNLRRVLNVP----KRGLGERAEALVAG 535 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWR--FGLTRMLLGYAMESAQGEWQSVLPYDES 553 I +G R ++P T G ++ G + ++ P Sbjct: 536 LAERERISFG--AALDRAEDVPGMSTRTLNPLRGFRDLMRGL-----RALVEAGEPPAAI 588 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 G + + G+LA L +E + F D E Sbjct: 589 LGAVLDRTGYLAEL-----RASDDPQDASRVENLAE-LHAVATEFSQTDPEGS------- 635 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + D +P + D + + G V + TL + + F Sbjct: 636 --LVDFLERVSLVADSDQIPDEDVAD------GEAEQEPKVDQGVVTLMTLHTAKGLEFP 687 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 VV L GM DG +P + D + ++R L + A+++LY+S G Sbjct: 688 VVFLTGMEDGTFPHMRS------------LHDDAELAEERRLAYVGITRARERLYLSRAG 735 Query: 734 RSIQDN--SERFPSVLVQELIDYI 755 +E PS + ++ + + Sbjct: 736 MRSAWGMSNEMPPSRFLTDVPEDL 759 >UniRef50_Q9CD72 ATP-dependent DNA helicase pcrA n=26 Tax=Actinomycetales RepID=PCRA_MYCLE Length = 778 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 68/435 (15%), Positives = 143/435 (32%), Gaps = 47/435 (10%) Query: 323 LDAFVDVTPDNLLHNIQSDILELEN--RAVAGVNIEEFSRSDNKRPLDPLDSSITF-HVC 379 ++ F PD ++ + +N A V F R D + D + +V Sbjct: 291 IEDFERDYPDTTTILLEQNYRSTQNILSAANSVIARNFGRRDKRLWTDAGKGELIVGYVS 350 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 + E + + D + L +T D+ V+ + + +PY + Sbjct: 351 DNEHDEAKFIADEI-DALVGGGEITYDDVAVLYR-----ANNLSRSLEEVFIPTGIPYKV 404 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 + I+ L + D+ + + +L+ P R I + + + Sbjct: 405 VGGFCFYESKEIRDLIAYLRVLDNPGDAVSMRRILNTP----RRGIGDRAEACVSVYAEN 460 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 +G + V E ++P + + + G+ V D+ + + Sbjct: 461 TGTSFADALQAVAEGKVPMLNTRSVKA-----IAGF-----------VALLDDLRCRVDD 504 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 +G L +++ + + R L +E + D LN E Sbjct: 505 DLGELVESVLERSGYLRELESSTDPQELARL--DNLNELVSFAHEFSTE-QANAAALAKS 561 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 + D L+ ++++ D ++I + +G V + TL + + F VV + G Sbjct: 562 LHTPEDEDVPDTGALAAFLEKVSLMSDTDQIPEN-NSGVVTLMTLHAAKGLEFPVVFVTG 620 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 DG+ P GD + ++R L + A+Q+LY+S Sbjct: 621 WEDGMLPHMRT------------LGDPTELSEERRLAYVGITRARQRLYLSRAITRSSWG 668 Query: 740 SER--FPSVLVQELI 752 S ++E+ Sbjct: 669 QPILNPESRFLREIP 683 >UniRef50_A8MLJ7 ATP-dependent DNA helicase PcrA n=3 Tax=Firmicutes RepID=A8MLJ7_ALKOO Length = 739 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 50/409 (12%), Positives = 123/409 (30%), Gaps = 75/409 (18%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 I ++ ++ E + + L E+ + ++ Y Q+ Sbjct: 332 IQYYRANNEYDEASFISGTI-EKLNEEENRPYSEFAIL------YRTNAQSRALEEMLMK 384 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 R +PY I ++ ++ L ++ V +++VP + I + + Sbjct: 385 RAIPYKIYSGTRFYDRKEIKDILAYLRTIENPVDDVSVKRIINVP----KRGIGIKSIDR 440 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 + YA + + ++L D+ Sbjct: 441 FDE---------------------------------------YAEGKNESFFGALLHVDQ 461 Query: 553 SSGLIAEL---VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + L+ L + ++ ++E ++A D + Sbjct: 462 MPDQSTRVKVQTNKFTELIQSLRDRQDEMSVTDIVKEIYEK-TGYIDALMAEDKIEAESR 520 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 Q++ ++ + + L R L LD+ V + TL + Sbjct: 521 IENLQEFLSVTKDFDENSEVKTLEEFLARTSLETTLDEND-----EENTVTLMTLHSAKG 575 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F VV + GM + ++P ++ +L +++R L + A++KLY+ Sbjct: 576 LEFPVVFIPGMEESIFPSAMSLQENNL-------------EEERRLCYVGITRAREKLYM 622 Query: 730 SYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 S+ S + E+ + + Q + + + + Sbjct: 623 SHAMTRTLYGRTNANPISRFLGEIPEELIQIDRPYNRKRDLKEMQTSPL 671 >UniRef50_C1ZCN1 ATP-dependent nuclease, subunit B n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCN1_PLALI Length = 1113 Score = 122 bits (306), Expect = 9e-26, Method: Composition-based stats. Identities = 81/602 (13%), Positives = 175/602 (29%), Gaps = 96/602 (15%) Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 P RE+E + ++ +I+V+V + S + + + +P Sbjct: 317 AAGGPHRELEAVSHQIKKW--RSSGFLAEEIVVVVRGLASEA----SRWLDHFELAGIPA 370 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 + +S PV+ L+ L + + S D L L+ + R L W+ Sbjct: 371 YAPQASSLESCPVVRWMAQLVKLELNDWTSHD-LRLVVSSTFFRPAQFPSKAKRALLAWL 429 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 +S +R +L + ++ E + + Sbjct: 430 AKSP-------------------------ASSRKILSLKARERAADPSALTTEKEINHTL 464 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF--FLPDAETEAAMTLIEQQ 615 ++ L L L+ E W+ + +++ + FLPD+ + A + Sbjct: 465 ------VSQGLETLLRVTEKLSTSHSFEGWIDLWAAIISQWTPFLPDSSNDRADRADWEL 518 Query: 616 WQAIIAEGLGAQY-----GDAVPLSLLRDELAQRLD-QERISQRFLAGPVNICTLMPMRS 669 Q I+ + + + L E+ L + + G +++ R Sbjct: 519 LQRILRRVSRCRGTWQEPSERLSLQAWWSEVEACLSVERSLPPAPSPGMISLIDPAQARF 578 Query: 670 IP-FKVVCLLGMNDGVYPRQ-------LAPLGFDLMSQKPKRG-DRSRRDDDRYLFLEAL 720 + + V ++G + YP L++ + + ++ LF + + Sbjct: 579 LDSARCVVIVGATEQAYPAADHTNCLYSHAERQSLIAAGLRLVREEDHSSEETLLFWQLV 638 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP---GDEALNCDESEARVK 777 A + L I+Y + + E FPS V D + LP G + + E + Sbjct: 639 SMATENLLITYPAINAK-GQELFPSPFVLAACDLFTKDVQLPRHVGSIHVMPEREEIHTR 697 Query: 778 AHLTCLHTRMPF--DPQNYQPGERQSYAREWLPAASQ-----AGKAHSEFVQPLPFTLPE 830 L + ++ G + + ++ + +E L E Sbjct: 698 RDLRIVAFEQAMTGHAGWWKTGLLDTTEGQAYRNMARGLPMLQARYRTEGFTEYEGMLNE 757 Query: 831 TV---------------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 + L+ + P R + + L + R L Sbjct: 758 PALREEFARQYGPEHQFSVTRLELYANCPFRFWIEEVLGLAPRETKQ-------LSTNYL 810 Query: 876 SRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ--QLADRVIA 933 R L +L+ + F E + + LA+ + Sbjct: 811 MRGTALHSALASLLGSGRLALADEAELSR------IFAEHVAVEMQRRAKGSPLAEAMAR 864 Query: 934 CR 935 Sbjct: 865 LD 866 >UniRef50_C5VHV2 ATP-dependent DNA helicase PcrA n=20 Tax=Bacteroidales RepID=C5VHV2_9BACT Length = 851 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 55/463 (11%), Positives = 136/463 (29%), Gaps = 71/463 (15%) Query: 379 CHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPADRYLPY 437 C+S + E V+ + L ++ + + ++ Y Q+ F + +PY Sbjct: 334 CYSDREEAMVVANE-LKRIKRNDDCDYGNFAIL------YRTNAQSRSFEDEFRKQGIPY 386 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 I + ++ I+ L + E +++ P I ++ + Sbjct: 387 KIIGGLSFYQRKEIKDIIAYFRLVSNPNDEEAFRRIINYP----TRGIGNTTIQKI---- 438 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLT----RMLLGYAMESAQGEWQSVLPYDES 553 ID + L T + ++GL M +A + + + ++ Sbjct: 439 --------IDCAQRNSVSLWETILNPIQYGLDVNKGTMTKLFAFRTLISGFIKNVALKDA 490 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 L E++ L+ R ++ D + Sbjct: 491 YELGKEIIEE-----SGLSADIRSGSEP-------------------EDLARRENLEEFM 526 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 Q + G + V L+ E+A D ++ V + T+ + + F Sbjct: 527 SAMQGFVDSGREEGREENVYLTDYLQEVALYTDADKEDDDTP--KVTLMTIHAAKGLEFP 584 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 V ++G+ + ++P ++ + +++R L A+ A++ ++ Sbjct: 585 TVFVVGLEENIFPSPMSASS------------KREIEEERRLLYVAITRAERHCILTNAK 632 Query: 734 RSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 + S + PS + + + + + + Sbjct: 633 NRFRYGSMQVDNPSRFLNDFDPALIHVEDEANSAFGGERRKMPWDEDNSSRNAWGRNRSE 692 Query: 792 QNY---QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET 831 N+ +P + + +R W Q G + Sbjct: 693 DNFREYEPNKAYTGSRPWGQEYRQMGSRWQNSNPVASQFRADP 735 >UniRef50_Q83GZ5 ATP-dependent DNA helicase n=2 Tax=Tropheryma whipplei RepID=Q83GZ5_TROWT Length = 743 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 61/419 (14%), Positives = 135/419 (32%), Gaps = 70/419 (16%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYL 435 + S + E + DR+ ++++ +L DI V Y Q+ V + + + Sbjct: 337 YCASSAEEEGRFVADRVRHLVDQGESL--SDIAV------FYRSNTQSRVIEESLIRQSI 388 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY + ++ ++ L++ + + + +L+VP + + L + Sbjct: 389 PYRVVGGTKFYERAEIKDILAYLTVIVNPDDTLALRRILNVP----KRGVGTVSENRLVE 444 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + + GI T L+R+ SA+ + + Sbjct: 445 FASARGI--------------------TLMQALSRIDEINIQPSAKSALRDLFY------ 478 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 L+ A M N L + D+L+ F D A + Sbjct: 479 ----LLNRFAGSSMPANELLDDLLKA----------TDLLSRFNNTDDPQNEARKINIGD 524 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 + + + G + +A ++ G + + TL + + F V Sbjct: 525 FVDSVEDFAKENPGGTLS--DFMTNIALMTSYDQSDDAP--GQITLMTLHMAKGLEFDFV 580 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 L G+ +G+ P + MS K K G +++R L + A++ L++S+ Sbjct: 581 FLTGLEEGILPHE--------MSLKEKNG----IEEERRLAYVGMTRAKKVLHLSFSSYR 628 Query: 736 IQ-DNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 + + R PS E+ ++ + H + + + + Sbjct: 629 KRYTDGVRLPSRFWDEIPQHLLRWHSRFTHKRFTGPLYGFTARPAGESRQSVHVLKNRY 687 >UniRef50_C6P8R0 ATP-dependent nuclease subunit B-like protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P8R0_CLOTS Length = 1053 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 90/716 (12%), Positives = 201/716 (28%), Gaps = 131/716 (18%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 +DI E+ + + S L+ D SI S + EV + + Sbjct: 254 NDIYEMIEVNHDVKKVATYIYSGE-TVLNGEDLSIKIMNSPSIEHEVRETARLIKRKIVF 312 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 D + P I V + +ID Y I +F + +P I+ + P+ +L+S Sbjct: 313 DK-INPDRIAVFIKNIDDYRTQIIDIF----DEMNIPVKINRGIKLSTMPITNDIYNLIS 367 Query: 460 LPDSRFVSEDVLALLDVPVL--AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 + E + ++ L + E + L SGI D+ E Sbjct: 368 YKLNH-DYESFVNIMTSKFLVPYEISKRSREIIDLL------SGIDRDKDNFE-DEFVTA 419 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 + + + + + E + + + Sbjct: 420 MKDDKSLNATFEFL---------KRYVDVFINFREVPYKDTK------EFVESVLKVIDL 464 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 L + ++ + + F A+ I+Q + + Sbjct: 465 LEIDFNIKALFDMGIIRSSDFIS----NVKALETIKQILNKELEIKKQYGEPSIDDIENF 520 Query: 638 RDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 ++++ L +S R L V I + R + VV +LG+N+GV P + Sbjct: 521 QNDILDMLSNFDVSIRNLDFEGVRIISPDLARGQMYDVVFILGVNEGVLPSTKSINPIFD 580 Query: 697 MSQKPKRGDRS--------RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 +S + + ++ F + SA +++Y+SY D S + Sbjct: 581 LSDEEYLEKHGIYMLSRKWEFEREKVRFNACIASALKEVYVSYRTTDE-DGCNMIKSPFI 639 Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE--RQSYAREW 806 +L + ++S+ R+ A + + R F+ E +W Sbjct: 640 DDLQNLFD-------------EKSKERLIAPIVYMKDRFAFECDAASKDEALLFMIDSKW 686 Query: 807 LPAASQAGKAHSEFVQ---------------------------------------PLPFT 827 A +S ++ L Sbjct: 687 NKRQGDANTIYSNILENDLYLTKSYSYINFSASIEKKRRANCEVDNHMGIISKDANLKEL 746 Query: 828 LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE---------IPDTEPFILEGLSRY 878 + +L + P + F + L ++ E E + + L Y Sbjct: 747 SDIHLSASSLNSYVVCPFKFFIETLLNLHVSDEFIESKKSIGSLYHEVLMKYYKDNLDLY 806 Query: 879 QINQQLLNALVE-------QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV 931 +N+ L +++ + + +F + + F + ++ ++ Sbjct: 807 DVNEDRLGEIIDESFEKITGIENDIIFDKIKQE-------FYNVVFQLVKDDISNRLYYY 859 Query: 932 IACRQPGQS------MEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW 981 E+ G G + ++ + + + + + Sbjct: 860 NKTGAELIPSIFEKKFEMKDHYGGNIFHGKIDRIDLERNID---GKFTGKYVIYDY 912 >UniRef50_A9BJS5 Putative uncharacterized protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BJS5_PETMO Length = 1081 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 70/565 (12%), Positives = 163/565 (28%), Gaps = 53/565 (9%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 I + N + R KR + +I ++ E+E L + L Sbjct: 264 ITNIHNFLKNEGFEFQSKRKGLKRIFENT--NIEIFPMNNDVSEIETLTKEIKRRLIS-E 320 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 L+P D+ V+V + + + D +PY + ++ + + Sbjct: 321 NLSPDDLGVVVPNNST-----AKLLADYLEDAKVPYRFKNDVPLNESQIVLILLQPIKTL 375 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 ED+LA+++ +TE + + ++ + D Sbjct: 376 VRGCEVEDILAMIESGY----GGVTELTMEQIENYLKHLNL--FYDIQKSSLKNRKEKWM 429 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 +T + + S + + E + EL L ++ L ++ ++ Sbjct: 430 NTVEKEIDK------RSSQLKGTEEIERISEELKDLRELKKCLGNIFSLLEDIQKSKDRK 483 Query: 582 R--PLEEWLPVCRDMLNAFFL------------PDAETEAAMTLIEQQWQAIIAEGLGAQ 627 R + ++ + ++ +N + P A+ E + Sbjct: 484 RYFSVSDYRELVKEWINTYLSHFNILKTYEDVLPVESQLNALKAFETLVFNVEENLEKIL 543 Query: 628 -YGDAVPLSLLRDELAQRLDQERISQRFLAGP-VNICTLMPMRSIPFKVVCLLGMNDGVY 685 + + L+ + E + V I +L R + K +G + Y Sbjct: 544 KSDKNLGIEKFYKILSSLIQIETYRESERYDNTVEIMSLEDSRFVKKKYKYFVGFTEENY 603 Query: 686 PRQLAPLGFDLMSQKPKRGDR-SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 P MS + R S + R LF+ + + + +Y P Sbjct: 604 PSIKVNPFITSMSNEGTSIARHSEKISRRNLFISMIFA--DNIIFTYPNA-KLSGEPILP 660 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 S +E + Y + + T G+++ Sbjct: 661 SPYEKEFRNNFKNVKYSSEFLSKKEILPKDPENIFSESEATIY-----YILNGKKEYLQS 715 Query: 805 EWLPAASQAGKAHSEFVQPLPFTLP-ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE 863 + + K + L + + + P + + L + R Sbjct: 716 KHCTDIERLKKEITNPSWQLYKNTDLGRLSHTKITTYVDCPFKYY----LGIEGRLNGD- 770 Query: 864 IPDTEPFILEGLSRYQINQQLLNAL 888 D F +GL ++++ +++ + Sbjct: 771 -KDFGKFF-DGLIKHRVMKEIFSKY 793 >UniRef50_B8FP41 ATP-dependent DNA helicase PcrA n=10 Tax=Firmicutes RepID=B8FP41_DESHD Length = 755 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 68/467 (14%), Positives = 141/467 (30%), Gaps = 88/467 (18%) Query: 307 GRDYIYLLS-DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKR 365 G D +L + + + ++ + +Q+ ++N D + Sbjct: 256 GADVQNILDFERDYPEAKTLKLEQNYRSTKSILQAANSVVQNNTERKEKSLWTENEDGQP 315 Query: 366 PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA- 424 I ++V + E + +R+ +L + V+ Y Q+ Sbjct: 316 --------IVYYVADNEHDEARYMGERIQRLLNV-EGRKFNEFAVL------YRTNAQSR 360 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 V +PY I ++ ++ L + + +L+VP + Sbjct: 361 VIEERFMKEGIPYRIFSGLKFYERMEIKDILAYLRILHNPADQVSFSRVLNVP----KRG 416 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 + E L + L YA E Sbjct: 417 LGESTLEKI---------------------------------------LDYANEQEMPVL 437 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC---RDMLNAFFLP 601 +++ D L + L + + R A E + + + + Sbjct: 438 DAIMEADYIPELQSRAKKPLLAFAHLMQELRALAAAESSVTKLVEEVLKRTGYWDNLVSD 497 Query: 602 -DAETEAAMTLIEQQWQAIIAEGLGAQ-YGDAVPLSLLRDELAQRLDQERISQRFLA--- 656 E EA + + + A Y AV + D L L +A Sbjct: 498 KSPEAEARLENLREFLSVTAEYDEKADNYETAVVQEGIEDALVPGLTGFLEQVSLVAQID 557 Query: 657 ------GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 V + T+ + + F VV L GM +G++P + L L++ Sbjct: 558 SLDQADDAVVMMTIHSAKGLEFPVVFLGGMEEGIFPSSRSMLDPVLLA------------ 605 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYI 755 ++R L A+ A+++LY++Y + + + PS QE+ ++ Sbjct: 606 EERRLCYVAITRARERLYLAYAQQRMLYGRTQYNRPSEFFQEIPTHV 652 >UniRef50_B5YF03 ATP-dependent DNA helicase PcrA n=2 Tax=Dictyoglomus RepID=B5YF03_DICT6 Length = 625 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 54/382 (14%), Positives = 122/382 (31%), Gaps = 78/382 (20%) Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPADRY 434 + + E + ++ LE +I V+ Y Q+ F A Sbjct: 318 LFRALNEEDEANFVARQI--KLEVAKGRRWSEIAVL------YRTNRQSRSFEEALIRNN 369 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +PY + + ++ ++ L++ + + +++VP R I + +R Sbjct: 370 IPYKVIGGMSFFDRKEVKDIVAYLNVIYNPNDIVSMKRIINVP----RRGIGDATFNMIR 425 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 ++ N+ GY++ A E + Sbjct: 426 EYYNK----------------------------------GYSLLEAVKEVSKIK------ 445 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 + S L + L L + + + N + + + + + Sbjct: 446 -------KEVKSFYE-LWTYLLVLKDSLTLRDLISTIINKTNYLSEFENQEKKELENRME 497 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 ++ L L L ++ G V++ TL ++ + F+V Sbjct: 498 NLMELMDFADNFSGKAQDTLGEFLTHL--SLTNSKLESTLEEGKVSLITLHSVKGLEFEV 555 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V L+GM +G+ P A + ++R L + A++KLY+SY + Sbjct: 556 VFLVGMEEGILPHYNATT-------------KEEIQEERRLCYVGITRAKEKLYLSYAAK 602 Query: 735 SIQDNSERFPSVLVQELIDYIG 756 + + + PS ++E+ + Sbjct: 603 --RYSRYQEPSRFLEEIYHLLT 622 >UniRef50_C0WAB3 ATP-dependent DNA helicase pcrA n=1 Tax=Acidaminococcus sp. D21 RepID=C0WAB3_9FIRM Length = 750 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 59/386 (15%), Positives = 127/386 (32%), Gaps = 68/386 (17%) Query: 374 ITFHVCHSPQREVEV-LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPA 431 IT+ + + E E +H+ L ++ D+ V+ Y Q+ F Sbjct: 319 ITYFQAFNDRNEAEFTVHNM--RRLRDEAHFHLGDMAVL------YRTNAQSRMFEETLI 370 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 LPY + ++ ++ L L + + + +++ P + I + Sbjct: 371 KNGLPYIMVGSLKFYDRKEVKDLLAYLRLLVNGRDEQALERVINEP----KRGIGSATVE 426 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 L+ +NE+G+ + L G Sbjct: 427 KLKMLLNETGL--------------------SLHEALKAPSAG----------------- 449 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 E G V ++LL L + E+ + + L +A L +E Sbjct: 450 ELLGRSLLKVTAFSTLLESLRKETDTVPVEQLMTDILEK-TGYWDALLLEGSEQARGRMD 508 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + + I E + + L + + L + + V + TL + + Sbjct: 509 NLDELKRIAMEFQEDENEEEKTLEDFLNHV--ALVSDIDDAKLSRDAVTLMTLHSAKGLE 566 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F VV + GM +G++P Q + D + +++R L + A++KL+++ Sbjct: 567 FPVVFMAGMEEGLFPSQRS------------LDDTDKLEEERRLCYVGITRAKKKLFLTS 614 Query: 732 IGRSIQDNSE--RFPSVLVQELIDYI 755 + PS ++E+ ++ Sbjct: 615 CRSRMMYGRTVMFPPSRFLEEIPRHL 640 >UniRef50_C1A3F5 ATP-dependent DNA helicase UvrD1 n=31 Tax=Bacteria RepID=C1A3F5_RHOE4 Length = 830 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 56/383 (14%), Positives = 124/383 (32%), Gaps = 33/383 (8%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 +V + E + + ++++ T DI V ++ S ++ +F +P Sbjct: 360 YVADNEHDEASFVASEIDRLVDQGET-KFADIAVFYR-TNNSSRALEEIF----IRLGVP 413 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 Y + + ++ L + + + + +L+ P R I + + Sbjct: 414 YKVVGGVRFYERKEVRDIVAYLRVLANEDDTVSLRRILNTP----RRGIGDRAEACVAVH 469 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 I + + E ++ + + + M DE Sbjct: 470 SEHRNISFAAALRDGAEGKVALLNTRSQKA----IASFLEMMDGLRALLPTPAADEDEPF 525 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 +G +A +++ +R LA ++ + D LN E + Sbjct: 526 ELGDIGEVAEAVLERTGYRAELAASSDPQDGARL--DNLNELVSVAREFSSDARNAAGLI 583 Query: 617 QAIIAE--GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 E + D L+ + ++ D +++ G V + TL + + F V Sbjct: 584 DPDDEETAAMREGEPDPGSLAAFLERVSLVADADQLPDS-DDGVVTMMTLHTAKGLEFPV 642 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V + G DG +P A GD + ++R L + A+Q+LY++ Sbjct: 643 VFVTGWEDGQFPHMRA------------LGDPAELSEERRLAYVGITRARQRLYLTRAIM 690 Query: 735 SIQDNSER--FPSVLVQELIDYI 755 S +QE+ + + Sbjct: 691 RSAWGQPIQNPASRFIQEIPEDL 713 >UniRef50_C5BBB0 ATP-dependent DNA helicase Rep, putative n=2 Tax=Edwardsiella RepID=C5BBB0_EDWI9 Length = 726 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 63/386 (16%), Positives = 118/386 (30%), Gaps = 68/386 (17%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + ++ E E + L+A T D ++ VF Sbjct: 363 LKVITANNEDHEAERVVGELIAHHFIHKTA-YSDYAILYR-----GNHQSRVFEKMLMQN 416 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY IS + S ++ +S L + + L +++ P R +I L+ L Sbjct: 417 RIPYKISGGTSFFSRAEIKDLLSYLRVLTNPDDDSAFLRIVNTP----RREIGPSTLQKL 472 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 W N+ GI + + ++ GL + L G Sbjct: 473 GAWANQRGI---------------SLFRASFDVGLEQTLSG------------------- 498 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV----CRDMLNAFFLPDAETEAAM 609 + L ++ R ++ + L E M Sbjct: 499 -----RGLASLQHFTRWMDELSRLCERDATAAVRDLIHGIDYESWLCETSASPRAAEMRM 553 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + Q + + G+ + + L+ + + R ER A V + TL + Sbjct: 554 KNVNQLFGWMTDMLQGSDLDEPMTLTQVVNRFTLRDMMERGESEEEADQVQLMTLHASKG 613 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V L+GM +G+ P Q + ++ D++R L + AQ+ L Sbjct: 614 LEFPYVYLVGMEEGLLPHQSSIDEDNV-------------DEERRLAYVGITRAQKALVF 660 Query: 730 SYIGRSIQDNSERF--PSVLVQELID 753 + Q PS + EL Sbjct: 661 TLCRERRQYGELMRPEPSRFLLELPQ 686 >UniRef50_C0R0K3 ATP-dependent DNA helicase n=2 Tax=Brachyspira RepID=C0R0K3_BRAHW Length = 665 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 59/436 (13%), Positives = 146/436 (33%), Gaps = 57/436 (13%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSI--TFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 A I ++ +K+ + + I T C + E + + D ++ L Sbjct: 283 LEAAHSVISNNTQRKDKKVVAEGEEGIPPTIMPCEDEREEAQFVADSIINY-SISKRLNY 341 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 D V+ +++ S F A R LPY + ++ ++ L+L + Sbjct: 342 EDFAVLFR-MNAQSRL----FEEAFRLRGLPYTVVGAFQFYERKEIKDILAYLNLFVNPE 396 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 +L ++++P + I + L + ++G+ + + + + + Sbjct: 397 DEVSLLRVINIP----KRGIGAVAINNLNEASIKNGV--SLYETLLNYESMDDISPKA-K 449 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 G+ L + ++ D+++ +L ++ L + L E Sbjct: 450 AGIKDFL------EVIDHYHNLFTVDKNALERPKLYENINKFLDVIAYHNEILNSSDTKE 503 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 + M +E I+ + L D + Sbjct: 504 Q------------------GAKKMENVESLMNGILE---YEKSNKNATLKNYLDRILLMS 542 Query: 646 DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 +E+ + + ++ + + F V + GM DG+ P Q + D Sbjct: 543 IEEQNDDEDKKKGIMLMSIHAAKGLEFPYVYICGMEDGIMPHQKS-------------LD 589 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPG 763 + +++R L A+ A++ L ++Y + + PSV ++E+ + + + Sbjct: 590 ENGLEEERRLCYVAMTRAKKHLTLTYCRSRTKMGKKVECTPSVFLEEMSANLPEEMAMNE 649 Query: 764 DEALNCDESEARVKAH 779 +E + ++ R + Sbjct: 650 EEFFSNLKASLRPENK 665 >UniRef50_A9NHW3 DNA helicase II n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NHW3_ACHLI Length = 703 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 47/412 (11%), Positives = 128/412 (31%), Gaps = 67/412 (16%) Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 S E +++ + + L +D DI ++ + + F + Sbjct: 319 IWSAQSDLNEAQMIANEI-ETLIKDGGYKYSDIAILYRN-----NALSRSFEDVFMKYNI 372 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY + + ++ ++ + L + ++ +++ P R I L L+ Sbjct: 373 PYVLYGGISFYQRKEIKDILAYIRLVVDPNLDFYLMRIINTP----RRAIGPTTLNKLQS 428 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + E + ++ +D S Sbjct: 429 YAKEHN---------------------------------------MSMFDAIDSFDISGK 449 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 L+ +L++++ + + + +++ E ++ Sbjct: 450 TKQSLLE-FKTLILEMKFDFQNFTELGKVVDYVAYKTGYNQMLETDKDEYSEERIEYIKE 508 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 + + A Y L L L Q + + ++ V + T ++ + FKVV Sbjct: 509 LKNPFVQA-EAYYEGTF-LEKLMQLLDQIALYSDLDRNKVSDAVVLSTFHQVKGLEFKVV 566 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 + M + ++P + D + +++R + + A+++LY++ + Sbjct: 567 FMTVMEEQIFPSSQS------------FMDLNELEEERRIAYVGVTRAKERLYLTRSEKR 614 Query: 736 IQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 + + PS ++E++ + G+ S +K + H Sbjct: 615 LLYGALIYPRPSRFLKEMMPE-QEVFTKKGNYTPQQSTSSNYLKPGDSVTHQ 665 >UniRef50_Q0TN58 ATP-dependent DNA helicase PcrA n=12 Tax=Clostridium RepID=Q0TN58_CLOP1 Length = 751 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 56/396 (14%), Positives = 124/396 (31%), Gaps = 72/396 (18%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPAD 432 I+ H +S + E + + L+ D +D V+ Y Q+ F A Sbjct: 316 ISIHRAYSDKMEAAFVVSEI-EKLKNDNGYKYKDFAVL------YRTNAQSRNFEEALRR 368 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY I ++ ++ L + + S + +++VP + I + + Sbjct: 369 AGIPYRIFGGLKFYDRKEIKDILAYLKIIVNPKDSISLRRIINVP----KRSIGDTTVEK 424 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L+ +A E + +L D Sbjct: 425 LQN---------------------------------------HATEIDDTLYNVLLDVDY 445 Query: 553 SSGLIAELVGHLASLLMQLNI---WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 GL A + + + L+ + +E L + + E ++ + Sbjct: 446 VPGLTARSINPIKKFTDMMEEIMVMSEQLSVSQLIEYVLEKTGYLKSLKDSKLIEDQSRI 505 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 +E+ + + ++ L + L Q +D + V + T+ + Sbjct: 506 ENLEELVSDAVEFEKSNEEDKSLSAYLEKVALVQDMDDLEAEDNY----VMLMTVHSSKG 561 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V L+GM +G++P + + ++ R L + A++KLY+ Sbjct: 562 LEFPTVFLVGMENGIFPNAACFEHDN------------QMEEARRLCYVGITRAEEKLYM 609 Query: 730 SYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPG 763 + + S + E+ I + G Sbjct: 610 TSAETRMIFGKTVAYGQSDFISEIPANIKDYVNING 645 >UniRef50_C3QGR5 ATP-dependent DNA helicase n=23 Tax=Bacteroidales RepID=C3QGR5_9BACE Length = 792 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 57/391 (14%), Positives = 128/391 (32%), Gaps = 63/391 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 I +S E +++ +++ A L + + ++ Y Q+ +F A Sbjct: 326 IGVFQAYSDVEEGDIVANKI-AELRREYHYGYAEFAIL------YRTNAQSRIFEEALRK 378 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 R +PY I + ++ I+ L + E +++ P I + + Sbjct: 379 RSMPYKIYGGLSFYQRKEIKDVIAYFRLVVNPNDEEAFKRIINYPA----RGIGDTTVGK 434 Query: 493 LRQWVNESGIR-WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 + G+ W + + G H G ++ G+ + A Sbjct: 435 IISAATNHGVSLWAAVCEPLSYGLDINKGTHAKLQGFRELIEGFIADQADK------NAY 488 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 E I G + + + L+++ +EE + +N F E Sbjct: 489 EIGTDIIRQSGIINDVCQDTSP--ENLSRKENIEE----LVNGMNDFCALRQEE------ 536 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 V L+ E+ L + + V + T+ + + Sbjct: 537 ----------------GNPNVSLTDFLSEI-ALLTDQDSDKADDGEKVTLMTVHSAKGLE 579 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 FK V ++G+ + ++P + +++R LF A+ A++ Y+S+ Sbjct: 580 FKNVFVVGLEENLFPSGMVGDS------------PRALEEERRLFYVAITRAEEHCYLSF 627 Query: 732 IGRSIQDNSER--FPSVLVQEL-IDYIGQSH 759 + PS ++++ +DY+ H Sbjct: 628 AKTRFRYGKMEFGSPSRFLRDIDVDYLRLPH 658 >UniRef50_A7VTM6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTM6_9CLOT Length = 740 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 58/402 (14%), Positives = 117/402 (29%), Gaps = 73/402 (18%) Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 E + +P I H + Q E + +L + D V+ ++ Sbjct: 304 EERKGKTLWTENPEGDKIQIHTSSNEQDEAGFVATTILEQVA--KGRKYSDFAVLYR-MN 360 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 S S ++ VF +PY I + I+ LS+ ++ + +++ Sbjct: 361 SQSNILEKVF----VKSGIPYRIIGGHRFYERREIRDMIAYLSVINNPSDEIRLRRIVNQ 416 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + I ++ + + G Sbjct: 417 P----KRSIGDKTIATASEIAGALG----------------------------------- 437 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE----RPLEEWLPVCR 592 + + + DE L V L + + E L E + Sbjct: 438 ----ESLLEVLGRADEFDSLRRASV-KLKAFYDMMQELIDANDDESVSLHELYELILEKT 492 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 + A E E + I + ++ + +E++ D + + Sbjct: 493 GYIEALRGEKEEAETRIENINELASNLLKFQEENGEEATLSA--FLEEVSLMTDIDNYDE 550 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 A V + T+ + + F VV L G +G++P A D + ++ Sbjct: 551 --TADTVVMMTMHSAKGLEFPVVFLPGFEEGIFPGLQA------------IYDPNEIQEE 596 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELI 752 R L A+ A++ LY+ + S PS E+ Sbjct: 597 RRLCYVAITRAKESLYLLNADSRMLFGSTSRNRPSRFSLEIP 638 >UniRef50_B2KB12 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KB12_ELUMP Length = 786 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 54/386 (13%), Positives = 109/386 (28%), Gaps = 75/386 (19%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPAD 432 I + E + ++E+ +L DI V Y Q+ F Sbjct: 321 IEVRELLTEGEEARWTAQNIANLIEDGASL--NDIAV------FYRTNAQSRNFEDNFRK 372 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 LPY + ++ + + + + +L +L+ P + I + Sbjct: 373 YQLPYRLIGAVRFYDRREIKDILGYARVLVNPLDTVSLLRILNTP----KRGIGKTAEEK 428 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 ++ N I + L R Sbjct: 429 FLEYANLHNI--------------------SLYQALQRSAF------------------- 449 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR-----DMLNAFFLPDAETEA 607 GL + ++ R L P + + + D E A Sbjct: 450 VEGLTPTARRAAQEFINLMDTLRLELKVTSPTDIVNKILTLSGYWKAVEDEVEKDLEAGA 509 Query: 608 AMTLIEQQWQAIIAEGLG-AQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + +++ A+ A+ LS E+ + Q AG V + T+ Sbjct: 510 RLDNLQELVNAVKEYEERMARTEREASLSDFVQEI-SLITGADEKQDSSAGAVTLMTVHL 568 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F VV + G+ +G++P +++R L A+ A+ + Sbjct: 569 AKGLEFPVVFVSGLEEGLFPLSSKDDDD--------------LEEERRLCYVAMTRAKDR 614 Query: 727 LYISYIGRSIQDNS--ERFPSVLVQE 750 L+++Y PS + E Sbjct: 615 LFMTYTSTRRIFGKMYTNLPSRFLFE 640 >UniRef50_D1A297 ATP-dependent DNA helicase PcrA n=3 Tax=Actinomycetales RepID=D1A297_THECD Length = 768 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 64/404 (15%), Positives = 124/404 (30%), Gaps = 55/404 (13%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYL 435 +V + E + + L + P D+ V Y Q+ VF L Sbjct: 332 YVADNEHDEAAFVAAE-VDRLTDAGLARPGDVAV------FYRTNAQSRVFEEVFIRVGL 384 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY + + ++ L + + + + +L+VP R I + + Sbjct: 385 PYKVVGGVRFYERKEVRDLLAYLRVLANPADTVSLRRILNVP----RRGIGDRAEACVE- 439 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + + R + ++P G A SA+ + V D+ Sbjct: 440 -AHAARERITFWEALRTPEQVP----------------GMAPRSAKAVREFVALMDDLRE 482 Query: 556 LIA-ELVGHLASLLMQLNIWRRGLAQERPLEE--WLPVCRDM--LNAFFLPDAETEAAMT 610 A L ++ + L R ++ + R++ + F Sbjct: 483 RAATATPAELIEAVLTETGYLAELQNSRDPQDETRIENLRELEAVAREFEDRLAERVPAA 542 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-----GPVNICTLM 665 E++ A G + + + L D + I A G V + TL Sbjct: 543 EEEEEEAPSGAAGRLVDFLEQISLVADADAI-PGTKGAPIPPGERAPEDEQGVVTLMTLH 601 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + F VV L GM DGV+P A +++R L + A+Q Sbjct: 602 TAKGLEFPVVFLTGMEDGVFPHLRAMSN------------PQELEEERRLAYVGITRARQ 649 Query: 726 KLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEAL 767 +LY++ + + S + E+ + + A Sbjct: 650 RLYLTRAVMRSAWGAPQVNPASRFLSEVPSSLVKWEREAAMPAP 693 >UniRef50_D1PL59 ATP-dependent DNA helicase n=4 Tax=Ruminococcaceae RepID=D1PL59_9FIRM Length = 871 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 59/390 (15%), Positives = 117/390 (30%), Gaps = 69/390 (17%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 + S Q E + D + L E L D V+ +++ S I+ F A +P Sbjct: 377 YTAASEQDEASHIADVIGEHLREGAHLR--DHAVLYR-MNAQSNPIETYFARAG----IP 429 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 Y I + ++ S L++ + + +++ P I + + + Sbjct: 430 YRIVGGQRFFDRKEVKDINSYLAVIVNPRDDVRLRRIINEPA----RKIGASTVDKVGEL 485 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 G+ V Y E Sbjct: 486 AARQGV------------------------------------PMLQIIADVRQYPEL-TR 508 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET-EAAMTLIEQQ 615 A + + +L + + E + + A E E + + Q Sbjct: 509 AAASLEKFYEMYRELCDLSVTIPLDEFAGEVIK--KTGYEAMLKAQKEEGETRLENLGQL 566 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 ++ + L L LD A V + T+ + + F V Sbjct: 567 VSSVKTYADQNGEDATLSGFLEEVALISDLDSYDQD----ADSVTMMTIHSAKGLEFPYV 622 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 ++GM DG++P +A + M +++R L A+ A+++LY+S Sbjct: 623 FVVGMEDGIFPGDMARYNEEDM------------EEERRLCYVAITRAKKELYLSTSRSR 670 Query: 736 IQDNSERF--PSVLVQELIDYIGQSHYLPG 763 + R PS + E+ + + P Sbjct: 671 LIFGQTRRNLPSCFLSEIDPGLMEETQSPE 700 >UniRef50_A1TNG2 ATP-dependent DNA helicase UvrD n=11 Tax=cellular organisms RepID=A1TNG2_ACIAC Length = 818 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 56/400 (14%), Positives = 133/400 (33%), Gaps = 59/400 (14%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 + + + E + + D + L + R+I V+ Y Q+ V SA + Sbjct: 350 VRVYEAPTDLAEAQWMVDEIRQ-LARNDGFERREIAVL------YRSNAQSRVIESALFN 402 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY + ++ ++ L L ++ + +++ P I + Sbjct: 403 AAVPYRVYGGLRFFERAEIKHALAYLRLLENPHDDTSFMRVVNFPP----RGIGARTVEV 458 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT-----------RMLLGYAMESAQ 541 L+ ++G + D + + R ++G +ES+ Sbjct: 459 LQDAARQAGC--SLHDAVSAVPGKAGANLGAFVAMVDVMREQTQGQTLRGIIGQMLESS- 515 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL-----AQERPLEEWLPVCRDMLN 596 ++ + + A+ + +L L+ + A P++E R Sbjct: 516 ----GLVEHYRAEKEGADRLENLDELINAAESFVTQEGFGRDAVALPVDEHGASLRQS-- 569 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 + ++ ++++ + G PL+ L+ + Sbjct: 570 ---PASQGIDPSLPVVDEPLPGGVDADTGETLS---PLAAFLTH--AALEAGDNQAQAGQ 621 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 V + T+ + + F V + GM +G++P + DR +++R L Sbjct: 622 DAVQLMTVHASKGLEFDAVFIGGMEEGLFPH------------ENSMSDRDGLEEERRLM 669 Query: 717 LEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDY 754 A+ A+++LY+S+ + R+ S EL + Sbjct: 670 YVAITRARKRLYLSHSQTRLLHGQTRYNIKSRFFDELPEA 709 >UniRef50_C8WV10 UvrD/REP helicase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WV10_ALIAD Length = 705 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 50/396 (12%), Positives = 110/396 (27%), Gaps = 69/396 (17%) Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISDR 442 E + + + + D V+ Y Q+ +R +PY + Sbjct: 327 AEAHYVAEAIEEHVRNGG--RYEDCAVL------YRANAQSRAIEEKLLERAIPYTVVGG 378 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 ++ ++ L + + +L +++ P + + + + L Sbjct: 379 MTFYDRREVKDVLAYLRVLVNPQDEISLLRIINRP----KRGLGDTAVDRL--------- 425 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 L +A +++ L + E +GL Sbjct: 426 ------------------------------LEFAHAEGMSLYEA-LAHGEEAGLSERTAE 454 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L + E V ++ + + +E + + Sbjct: 455 AARQFHASLQELALWMEGMAVSEFLAEVLHATRYREMYLESGKKEDLARVEN-IDELFSV 513 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 ++ E+ L + G V + TL + + F VV L+GM + Sbjct: 514 TRSFDERRGGTVAEFLAEV-SLLSDIDKERDRGKGSVRLMTLHASKGLEFPVVFLVGMEE 572 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS-- 740 G++P + D R +++R L L A +L +++ Sbjct: 573 GLFPHARSMD------------DPLRIEEERNLCYVGLTRAMDRLVLTHAAWRTLYGQTV 620 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 R PS + E+ + + L RV Sbjct: 621 AREPSRFLAEIREDLVVRVDLAEALEPEVLRPGDRV 656 >UniRef50_Q018Z5 ATP-dependent DNA helicase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q018Z5_OSTTA Length = 859 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 61/430 (14%), Positives = 125/430 (29%), Gaps = 50/430 (11%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 A A + F + P + + + E E + ++ +D L Sbjct: 373 EAAQAVIKESSFPSPLDLVAHTPGGRDVAIVEANDDREEAEFIALEARKLV-QDSDLRYS 431 Query: 407 DIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 D+ V+ Y QA V A +P+ + + S ++ I+ L + + Sbjct: 432 DVAVL------YRTNSQARVLEEAFIRAGVPHTVVGDTSFYSRKEIKDMIAYLRIVSNSS 485 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 + + +++ P I + L W+ + G+ L A + Sbjct: 486 DTVSLNRIINTP----TRGIGNSTIEKLNAWLKTLPKKDGLSPSIGDALLRGAWKTNPGE 541 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 +LP + GL A + + + + ++ P E Sbjct: 542 Q------------------SELLPSADEMGLTARARTAVLNFVELMRACQQTAMNATPGE 583 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE---GLGAQYGDAVPLSLLRDELA 642 V + + DA+ Q+ + E + D V L L L Sbjct: 584 LLEDVIKRTGYETMVLDADDGVDRWAFVQELINLAKEPPRDVDETIQDRVGLEALGAFLE 643 Query: 643 --QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 L + T+ + + F V + G+ DG+ P D Sbjct: 644 GVSLLTSAETDDVTGGDKAKLMTMHASKGLEFDTVFIAGVEDGLIPFIRNGDSDD----- 698 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN---SERFPSVLVQELIDYIGQ 757 +D++ LF + A++KL + + + S L+ + + Sbjct: 699 -------DQDEEVRLFYVGITRAKRKLMLCHARERRRFGQSPQAARRSFLLDSISATLTG 751 Query: 758 SHYLPGDEAL 767 + L Sbjct: 752 TKKPERPVTL 761 >UniRef50_C0VSX9 ATP-dependent DNA helicase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VSX9_9CORY Length = 735 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 55/402 (13%), Positives = 118/402 (29%), Gaps = 72/402 (17%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E + + +D L ++ VM ++ S I+ VF +PY + Sbjct: 327 EARFIASTI-----DDRNLPYNEVAVMYR-TNAASRVIEDVF----IRTGIPYRVVGGTR 376 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 + I+ L + D+ + +++ P R I ++ L ++ Sbjct: 377 FYERKEVRDIIAYLRVVDNPDDEVSLRRIVNTP----RRGIGDKALAFVT---------- 422 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 +A ++++ DE L A + Sbjct: 423 -----------------------------AFASRENISLYEAMRHVDEVDYLGARGRNAI 453 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP-DAETEAAMTLIEQQWQAIIAEG 623 A + + R G + L + + D EA + + + Sbjct: 454 AKFVAMMEELRAGTQEVGDLINLITDVSGYRDELEKSKDPRDEARLDNLNELVAYARDFA 513 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP--VNICTLMPMRSIPFKVVCLLGMN 681 A+ D ++ L + Q AG V + TL + + F V L G Sbjct: 514 QQARANDEDD--SVQAFLERVSLVADADQIPDAGQGVVTLMTLHTAKGLEFPYVFLPGWE 571 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 +G +P + G+ +++R L + A+++L+IS I + Sbjct: 572 EGQFPHMRS------------LGNTEEIEEERRLAYVGITRARKQLFISRALLRIAWGNP 619 Query: 742 R--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 + S + ++ + + + S Sbjct: 620 QTNPESRFLGDIPSSLIEWEREEPAYGVGGGYSSYGGNDGWI 661 >UniRef50_C9XK50 ATP-dependent DNA helicase n=5 Tax=Clostridium RepID=C9XK50_CLODC Length = 762 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 52/410 (12%), Positives = 126/410 (30%), Gaps = 54/410 (13%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I + S E + + D + A + +D V+ P A Sbjct: 324 IKIQLTGSEIEEADFIADSI-AQIARKENRPYKDFAVLYRANAQARPV-----EDALNRS 377 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY I ++ ++ L + + + +++VP R I + + Sbjct: 378 QIPYNIYGGTKFYERKEIKDLLAYLRVIQNPQDDISIKRIINVP----RRGIGLRTIEKI 433 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA-MESAQGEWQSVLPYDE 552 R + +++ + + + G+ + + V P + Sbjct: 434 ED-------RANLKQESIYSVLIDIETNSDISTKARASISGFVDIIGTLRTIKEVYPVSK 486 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQE-RPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + + G++ L+ N + L + ++ + R+ ++ ++ + Sbjct: 487 LIEKVLDTTGYMDELVEIRNKNEKDLTGKGEEAQDRIDNLREFISIALEFESSNDDTYEN 546 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 L +A + + V++ T+ + + Sbjct: 547 K--------------------DLETFLTSIALTSES---NDEEDNDRVSLMTIHTSKGLE 583 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F VV L GM +G++P A S+ +++R L + A+++LY+S Sbjct: 584 FPVVFLTGMEEGLFPISRAIKSMS----------DSQIEEERRLCYVGITRAKEELYMSL 633 Query: 732 IGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 + S ++EL + + Y E S + + Sbjct: 634 TEKRTLYGKTNVAIASRFMEELPEECIERLYKVKKELSYSKASYNMLDKY 683 >UniRef50_B7C8B0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8B0_9FIRM Length = 725 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 65/412 (15%), Positives = 125/412 (30%), Gaps = 69/412 (16%) Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 P D IT E + ++ + L +D+ ++ S + F Sbjct: 313 PGDEKITMFEGKEDSEEPIFVARQINE--KHKKGLEYKDMAILYR-----SNYSSRAFER 365 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 +PY I ++ + L L +R EE Sbjct: 366 IFKSVGIPYVIYGGIRFYERQEIKDALCYLRLCTNR---------------------NEE 404 Query: 489 GLRYLRQWVNESGI----RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 + + + R GI + L+ A +H M L M+ Sbjct: 405 DPDQMALDLAVLRVINVPRRGIGARTIENLQKQAAERH--------MNLYDVMKDP---- 452 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 GL + + + R + LE++L D + E Sbjct: 453 ---------IGLSTAVTKKCEMFVDLIEDLREN-REHYALEDFLDYVLDT-TGYISMLKE 501 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 + + + + + D L L +Q V++ T+ Sbjct: 502 DRESGQDRIDNLKELKEDIAQSMIEDPEM--TLESYLQDIALFTDKTQETSENTVSLMTV 559 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + + F V L+ NDGV+P A + + +++R L A+ A+ Sbjct: 560 HAAKGLEFDTVFLVNFNDGVFPSSRACDEGGMKA----------LEEERRLLYVAMTRAK 609 Query: 725 QKLYISY-IGRSIQDNSERFPSVLVQEL-IDYIGQSHYLPGDEALNCDESEA 774 + LYI++ G S ++ + PS E+ ++YI Q + S++ Sbjct: 610 KTLYITWNTGFSYMQDAFKTPSRFRAEIPMEYIVQEEKEEAPKQPKAVVSQS 661 >UniRef50_C2CV85 Possible ATP-dependent DNA helicase n=2 Tax=Bifidobacteriaceae RepID=C2CV85_GARVA Length = 964 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 53/386 (13%), Positives = 112/386 (29%), Gaps = 67/386 (17%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 +V + Q E + + A L + + DI +M A LP Sbjct: 459 YVADNAQGEASWVAQEI-ARLAGEDGVNYSDIAIMYRANSQSRSL-----EDALIKSGLP 512 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 Y + ++ ++ L + ++ +L+VP + + + + Sbjct: 513 YQLVGGTKFYERREVKDALAYLQSIANPDDDVNMRRILNVP----KRGLGARAESQITSY 568 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 E+ I ++ L + E G+ Sbjct: 569 AKENSI--------------------SFWSAL----------------SQIDKIAEQIGI 592 Query: 557 IAELVGHLASLLMQLNIWRRGL----AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 + L S + + ++ + E + +L + Sbjct: 593 SSRTFNALKSFRDLMTSLIDFMKANDSKPSKVVENVLNESGLLQDLRESKDPQDEFRVDN 652 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS-QRFLAGPVNICTLMPMRSIP 671 Q Q++ AE V + + A D +++ Q G V + TL + + Sbjct: 653 LSQLQSVAAEYEQNTPDANV--AGFLETTALVADSDQLPDQGEDTGKVTLMTLHTAKGLE 710 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 + VV L GM G +P + ++R L + A++ LY+++ Sbjct: 711 YPVVFLTGMEQGTFPHSRCVDNQKELC------------EERRLAYVGITRAKKILYVTW 758 Query: 732 IGRSIQDNS--ERFPSVLVQELIDYI 755 Q E S + E+ + Sbjct: 759 AAERSQWGKSAEMIQSQFLDEIPADL 784 >UniRef50_C1XMD9 ATP-dependent DNA helicase, Rep family n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XMD9_MEIRU Length = 706 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 48/423 (11%), Positives = 116/423 (27%), Gaps = 79/423 (18%) Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 RP P + + + + E + ++ + + I V+ Y Q+ Sbjct: 309 RPTRPGGEPVRLYRAPNAREEAAFVAREIVKLGN------FQQIAVL------YRTNAQS 356 Query: 425 -VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 + +P + ++ ++ + + S ++ +++ P Sbjct: 357 RLLEEHLRRANVPVRLVGAVGFFERREIKDLLAYGRVAVNPADSINLRRIVNTPP----R 412 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 I + L ++ ++ Sbjct: 413 GIGATTVSRL--------------VEHAQKTGTTVFEAF--------------------- 437 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM-LNAFFLPD 602 + + + + + L+ + P + V + Sbjct: 438 --------RVAEQVISRPQQVQAFVRLLDELIEAAFESGPTAFFQRVLEQTGFREALKQE 489 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNIC 662 + E + +E+ +A LS D +A E A V + Sbjct: 490 PDGEDRLQNVEELLRAAQDWEEEEGG----SLSDFLDSVALTAKAEEPQGDAPAEAVTLM 545 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 TL + + F V L+G+ + + P + + +++R LF + Sbjct: 546 TLHNAKGLEFPTVFLVGLEENLLPHRNSLHRL------------EDLEEERRLFYVGITR 593 Query: 723 AQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 AQ++LY+SY PS ++++ + + GD + Sbjct: 594 AQERLYLSYAEERETYGKREYTRPSRFLEDIPQDLLKEVGAFGDSEVRVLPQARPEPKPR 653 Query: 781 TCL 783 T L Sbjct: 654 TQL 656 >UniRef50_B4CU41 UvrD/REP helicase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU41_9BACT Length = 678 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 48/388 (12%), Positives = 117/388 (30%), Gaps = 71/388 (18%) Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 + ++E E + + + + + ++ +++ S ++ Sbjct: 317 DKVRIVGMSDDRQEAEFIANEIAQRSVTESAPH-EEFAILFR-MNAQSRLLET----NLR 370 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +PY I ++ ++ ++ + + +L +++ P I+ + Sbjct: 371 QLNIPYRIIGGKSFFDRREVKDLLAYANCLVNTDDDVSLLRIINTPA----RGISSNTVE 426 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 ++ + + + Sbjct: 427 KATD---------------------------------------FSAKQKCSVFDVLTNEA 447 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA-----ETE 606 L V L + L+ + L L + V R+M+ D +T Sbjct: 448 FRGTLTKRTVESLDRFVEMLDRFETKLNTP--LSDHAAVLREMMKETGYLDELKRTCKTP 505 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 E ++ Q + L DE++ R ++E V + TL Sbjct: 506 QEALSRETNLMDLLKSFEDYQGRSSEGLRGFLDEMSLRQEREEDDDDARGTGVTLITLHA 565 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + + V L+G+ +G+ P + L + D++R L + A++ Sbjct: 566 AKGLEYPHVYLIGLEEGLLPHDRSKLEGTV-------------DEERRLLYVGITRARRT 612 Query: 727 LYISYIGRSIQDNSERF--PSVLVQELI 752 L +S+ I+ S PS ++EL Sbjct: 613 LALSWCRHRIRYGSPMPCTPSSFIKELP 640 >UniRef50_D1NAY9 UvrD/REP helicase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAY9_9BACT Length = 679 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 53/412 (12%), Positives = 128/412 (31%), Gaps = 60/412 (14%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + + + E E + + M + P L +D ++ S + + Sbjct: 319 VKIVTTENGESEAEFIGSMITQMKNDKPELRYQDFAILYR-----SNHLSRQLEQTLRRQ 373 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY + + ++ ++ L L + + +L +L P + ++ + L Sbjct: 374 QIPYRLVGGQEFFKRREIKDAVAYLKLLVNPCDDQSLLRILGTPP----RGLAQKAVDSL 429 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + G + EL A + + L A +A+ + Y E Sbjct: 430 ---------KTGRRAKHKPMFELLAEEEF------QKELTPKAAAAAREFAEVYAKYKER 474 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 L + L ++ D L + + ++ Sbjct: 475 FAEPGALAWKITEFLKEIGYL------------------DGLQRIYKDLKDAMKRRENVD 516 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPF 672 + AI + + L + LA + +++ + V + T+ + + F Sbjct: 517 EFITAITQY--EERQAEPPTLEAYLENLALLEESDKVEEETGTVDAVTLMTVHASKGLEF 574 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 VV ++ M ++P + + +++ LF A+ A++ LY+ Sbjct: 575 PVVFVVAMERNIFPH-------------ERALEEGSVEEELRLFYVAITRARKYLYLLRA 621 Query: 733 GRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 +Q R PS + L D + + ++ + A++ Sbjct: 622 KERMQRGITRATLPSPFLHLLTDEVAERTTPEELLRPASEDEVRQAFANIFK 673 >UniRef50_Q0AHY9 ATP-dependent DNA helicase UvrD n=16 Tax=Betaproteobacteria RepID=Q0AHY9_NITEC Length = 748 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 49/395 (12%), Positives = 117/395 (29%), Gaps = 65/395 (16%) Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAP 430 S+ + + E + D + A+ L+ +I ++ Y Q+ V Sbjct: 317 ESVRIYYAATDVDETSFIVDEIKALHA--EGLSLSEIALL------YRSNAQSRVLEHGL 368 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 + + Y + ++ ++ L L S +L +++ P I L Sbjct: 369 FNASISYRVYGGMRFFDRQEVKHALAYLRLVASPDDDNALLRVINFPP----RGIGARTL 424 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 L+ G W+ L + Sbjct: 425 EQLQDQAEILG-------------------TSLWQAALK-------------VCEGRKAV 452 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 + +L++ + G + + ++ + + Sbjct: 453 TTRGDQPGRGIAGFVNLVLSMQQACEGQPLPEIIRRVVDQ-SGLVAHYQAEREGNNERLE 511 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 +++ A + A+ L+ L+ V + T+ + + Sbjct: 512 NLKELVNAATSFVHEAEDD---SLTAFLAH--ASLEGGEHQAEGYQDAVQLMTVHAAKGL 566 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 F V + G+ +G++P + + + + +++R L A+ A+Q+LY+S Sbjct: 567 EFHSVFISGLEEGLFPHENSRN------------EPNGLEEERRLMYVAMTRARQRLYLS 614 Query: 731 YIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPG 763 Y + R PS V E+ + + + G Sbjct: 615 YAESRMLHGQVRVNVPSRFVDEIPEELLKRLRSSG 649 >UniRef50_C5C915 ATP-dependent DNA helicase PcrA n=7 Tax=Actinomycetales RepID=C5C915_MICLC Length = 858 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 54/365 (14%), Positives = 116/365 (31%), Gaps = 55/365 (15%) Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISDRRARQSHPVLE 452 + L+++ + P D+ V Y Q+ R +PY + ++ Sbjct: 410 IDRLQDEDGIRPSDVAV------FYRTNAQSRALEERLVTRGIPYRVIGGTRFYDRKEIK 463 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 ++ L + + +V +L+ P + I + + W + R Sbjct: 464 DALAYLRVIVNPDDDVNVRRILNEP----KRGIGDRAEGAVAAWAQRN--RSTFSAALRD 517 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 P + + A+ + E++G L L + Sbjct: 518 AEHAPGLAARSLK----------AVNGFVQMMDDLAQVAETAGPATVLEAVLEQ-----S 562 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 L + L++ A+ + + + ++ +G + + + V Sbjct: 563 GMLAALRESEDLQD-------------ESRADNLGELVAVVRSFEKTTPDGTLSDFLEQV 609 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L D+L D E + G V + TL + + F VV L GM GV+P + Sbjct: 610 ALVADADQLPTAPDVEGEALAEAQGQVTLMTLHTAKGLEFPVVFLTGMEHGVFPHARS-- 667 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQE 750 D ++R L L A+++L+++ + PS + E Sbjct: 668 ----------MTDEKELAEERRLAYVGLTRARRRLFLTRAEARSLWGQHQFNPPSQFLGE 717 Query: 751 LIDYI 755 + + + Sbjct: 718 IPEAL 722 >UniRef50_C3XD55 ATP-dependent DNA helicase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XD55_9HELI Length = 711 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 52/428 (12%), Positives = 127/428 (29%), Gaps = 72/428 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + + H + E++ + + + ++ + + DI ++ +++++ ++ F Sbjct: 318 VQYIKSHDDKAEMKQIIESIQTLIAQGE--SYNDIAILFR-LNTFARHVEECFNRT---- 370 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLP---DSRFVSEDVLALLDVPVLAARFDITEEGL 490 + + + ++ ++ L L D F E ++ + I E+ Sbjct: 371 KISFKMVGVIRFYDRQEIKDVLAYLRLALNLDDNFSLERIIN-------QPKRSIGEKTF 423 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 + + + + ++ L + H Sbjct: 424 GDI----VAASMHYTSIYAAWKQGGLSSLKCH---------------------------- 451 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLA-QERPLEEWLPVCRDMLNAFF--LPDAETEA 607 L+ + R L + + + E Sbjct: 452 -----------AKLSEFFTLIESLRECLQLNPSEIPHFFKTKIKLYADDIPTKDSESNED 500 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 +++ + ++ + GD + + S + V ++ Sbjct: 501 RRKNMDELFATLLDFIECERGGDYASNEEIIQAFLNDIALSSSSDIEDSNHVLCMSVHNS 560 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + FK V ++GM G++P + F MS + D++R L A A+ L Sbjct: 561 KGLEFKHVFVIGMEQGLFPL----MNFYEMSIDSVDKNTQNLDEERRLAYVAFTRAKDTL 616 Query: 728 YISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 +SY + + E PS + E Q+ L +E+ C A +K H Sbjct: 617 TLSYAKKRMHHGRYREFEPSQFLVESGVVSKQNARLRDEESDKC---VAGLKRGDCVQHK 673 Query: 786 RMPFDPQN 793 F Sbjct: 674 IFGFGRIE 681 >UniRef50_C4V2E0 ATP-dependent DNA helicase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2E0_9FIRM Length = 746 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 60/436 (13%), Positives = 130/436 (29%), Gaps = 62/436 (14%) Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 + +P IT + + + E + + L + DI V+ ++ Sbjct: 301 RKKKELWTDNPTGDRITIYEGATEKNEASYIVRE-VERLHTMFHVKYGDIAVLYR-TNAQ 358 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 S I+ F +PYA+ ++ I+ L + + + +L +++VP Sbjct: 359 SRNIEEAF----YATGVPYAMVGSVRFYDRREIKDIIAYLRVIYNPRDTLSLLRIINVP- 413 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 R + + + + E R+ L + Sbjct: 414 ---RRGLGPTSIARMMETAEEY-----------------------------RISLFEVIT 441 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 AQ L A++ L + + L RP+ E + + Sbjct: 442 DAQ-------LLSMIPKLSAKVKVALEEFAAMVFTFMGQLGT-RPIHEIVEDVIETSGYA 493 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 + E + + + I+ G + L D LAQ + Q + Sbjct: 494 AALEEEKKEDNRDRLENLREFISVAKNFDDGAEEGENGLADFLAQIALISDVDQTEQSDG 553 Query: 659 -VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V + T + + F V + GM +G++P D + +++R Sbjct: 554 TVTLMTFHAAKGLEFPAVFMAGMEEGLFPHSRT------------LLDDTEIEEERRTCY 601 Query: 718 EALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 + A+++LY++Y + PS + E+ + + + + Sbjct: 602 VGITRAERRLYLTYARQRTIYGRTEMSRPSRFLAEIPEELVEHKEADFFGGADLRAPSNI 661 Query: 776 VKAHLTCLHTRMPFDP 791 T + P Sbjct: 662 WSERSTRTQRKRYIAP 677 >UniRef50_B1I553 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria RepID=B1I553_DESAP Length = 718 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 60/380 (15%), Positives = 118/380 (31%), Gaps = 71/380 (18%) Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRY 434 H + E + + + + RD V Y Q+ V Sbjct: 324 LHQARDERAEARFVAREIRRL--RAQGRSYRDFAV------FYRTHAQSRVLEDELLRHG 375 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +PY I ++ ++ L L + + +++VP Sbjct: 376 VPYTIIGGVKFYDRKEIKDLLAYLKLIVNPDDDVALTRIINVP----------------- 418 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 R G+ ++ + Y ES+ ++ D Sbjct: 419 --------RRGVGKASLVKFFA------------------YVRESSVACADALREADRIR 452 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 GL A + + +L QL WR L E + L A +AE + Sbjct: 453 GLSAGVREAMGALGEQLARWREREGGVTGLTEQVLEESGYLTAL---EAERTVEARTRME 509 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 ++ L+ ++LA D +R + V + TL + + F V Sbjct: 510 NLSEFLSVTREFDLQRGGTLAEFLNDLALYTDLDRFDGE--SSQVTLMTLHSAKGLEFPV 567 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V L GM +GV+P A + +++R L + A+++L+++ Sbjct: 568 VFLTGMEEGVFPHTRA------------FSEPVEMEEERRLCYVGITRARERLFLTLAES 615 Query: 735 SIQDNSERF--PSVLVQELI 752 + + + PS ++E+ Sbjct: 616 RLLYGNVYYGVPSRFLREIP 635 >UniRef50_B2S250 Rep helicase, single-stranded DNA-dependent ATPase n=4 Tax=Treponema RepID=B2S250_TREPS Length = 657 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 65/440 (14%), Positives = 142/440 (32%), Gaps = 76/440 (17%) Query: 355 IEEFSRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 I ++ K DS I + + E + + +LA + + V++ Sbjct: 282 IAHNTQRKEKALWSGNDSGKPIEIFNPETERDEAIFIANTILAEQIR-ASYSFSSFGVLL 340 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 +S+ I+ VF +PY +S + ++ +S L + + ++L Sbjct: 341 R-TNSFMRIIEDVFLQ----ENIPYRVSGGMSFFQRKEIKDVLSYLRVISNPDDDVNLLR 395 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 +++ P R I ++ L + + T Q + L +++ Sbjct: 396 IINTP----RRGIGKKTLHLVSD--------------------IANTQQCSVFNALNQII 431 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW----- 587 D + + L + R L + L Sbjct: 432 ------------NKTHAVDLKESHRT----AVENFLQLITQARTHLLSGKNLAYKVRKFV 475 Query: 588 --LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ-R 644 + ++ F + IE ++I +++G L D L + Sbjct: 476 EDIQYFNYLIQEFQKNEHAARFKFLQIEHLVESIEHWEQSSEHGS------LYDYLNRVT 529 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 L Q+ G V++ T+ + + F VV + G+ G P + + + Sbjct: 530 LLARDNVQKETEGAVSLMTIHASKGLEFPVVFIAGVEAGTIPHERSIEEVHSI------- 582 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLP 762 +++R LF A+ A++KLY+++ + ER S + E+ ++ ++H Sbjct: 583 -----EEERRLFYVAITRAKEKLYLTHCRTRKRGGKREERTASPFLDEIPKHLVRAHAPE 637 Query: 763 GDEALNCDESEARVKAHLTC 782 G + L Sbjct: 638 GKISEEEVTRAFTRIKKLFT 657 >UniRef50_C1ZKV9 DNA/RNA helicase, superfamily I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZKV9_PLALI Length = 680 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 54/423 (12%), Positives = 132/423 (31%), Gaps = 71/423 (16%) Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 R + + +S+ F Q E E + + ++ + + P +I ++ + Sbjct: 301 RHEKRLIAHRGGTSVVFREYPDEQAEAEGVVRDIAYLIHQL-NVRPCEIAILFRTNEQ-- 357 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 +F + + Y I ++ ++ + L + + +L +++VP Sbjct: 358 ---PRIFEHELRRKQIHYRIVGGQSFFDRKEIKDLQAYLKVLVNPRDDLSLLRIINVPP- 413 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 I + L L A++ Sbjct: 414 ---RGIGDATCERL---------------------------------------LARAVKE 431 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN--- 596 + W + + + ++ + +L Q++ R Q + M+ Sbjct: 432 KRRFWDVIPDAAAAGEITSKALNNLRQFEKQMSGLREAFKQPGV--KLSETFLRMVETTG 489 Query: 597 -----AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 AE + LI ++ +++ L DE++ Sbjct: 490 YAREIERTYKSAEQQEMRNLILGEFANAVSQYEAQSRSP--SLEGYLDEISLGGSDFAAP 547 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 +R + + TL + + F+ V L+G+ +G+ P + + + + S ++ Sbjct: 548 ERPDENAITLMTLHSAKGLEFERVYLVGLEEGILPHKRSVD--------EEFENPSSVEE 599 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNC 769 +R L + A+ L I+ ++ +R PS ++E+ I + G Sbjct: 600 ERRLCYVGITRAKDFLTITRSQSRVKWGKKRETKPSRFLKEMRTAIETTAAPEGAGIDTA 659 Query: 770 DES 772 S Sbjct: 660 ARS 662 >UniRef50_B4VQT2 UvrD/REP helicase subfamily n=6 Tax=Bacteria RepID=B4VQT2_9CYAN Length = 1139 Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 119/400 (29%), Gaps = 68/400 (17%) Query: 375 TFHVCHSPQREVEVLH---DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 CH E+E H ++L + +++P L ++ Y Q+ Sbjct: 733 EVIYCHHADDELEEAHFVVQQILKLNQQNPELGWGSFAIL------YRTNAQSRPLEDAL 786 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +PY I ++ ++ L + + +L +++ P Sbjct: 787 RGRVPYVIIGGLKFYDRKEVKDALAYLRTIANPSDTVSLLRIINTP-------------- 832 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 R GI + L L A T + + R + Sbjct: 833 -----------RRGIGKATIDNLVLAAQELGTPLWEIIR---------------DETSVN 866 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 +G A+ V A L+ Q L ++ + + + Sbjct: 867 TIAGRSAKAVNRFAQLIKQCQENTENLKAVEIIKFIMEE-SGYTDDLKNQGTDEAENRLA 925 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + I + ++ L LA LD Q+ V++ TL + + Sbjct: 926 NIHELYNAIVQFQEENEDTSLEGFLANASLASDLDNLEDGQQ----AVSLMTLHSAKGLE 981 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F VV L+G+ G++P D +++R L + AQ++L++++ Sbjct: 982 FPVVFLVGLEQGLFPHNRTID------------DPVALEEERRLCYVGITRAQEQLFLAH 1029 Query: 732 IGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNC 769 S + EL + + S + + Sbjct: 1030 ARERRLYGYREPAVRSQFLDELPEDLISSTLVKVKQQTPP 1069 >UniRef50_D2NR24 Superfamily I DNA and RNA helicase n=17 Tax=Bacteria RepID=D2NR24_9MICC Length = 985 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 56/379 (14%), Positives = 115/379 (30%), Gaps = 54/379 (14%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYL 435 +V S E + + L ++ + P D+ + Y Q+ L Sbjct: 473 YVAESEHAEARFITREI-DRLADEHGVQPGDVAI------FYRTNAQSRTLEDMLMRAGL 525 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY + ++ ++ L + +V +L+ P + I + + Sbjct: 526 PYRVVGGTRFYERKEIKDALAYLRALSNPDDDVNVRRILNEP----KRGIGAKSESVVAD 581 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + I + ++P LG A E+ L D + Sbjct: 582 YATAHRI--SFFAAARQAADVPG--------------LGAAAVKKYAEF-VRLMDDLAQI 624 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEE--WLPVCRDMLNAFFLPDAETEAAMTLIE 613 E +++ + L + +++ + ++L+A + E A Sbjct: 625 ARTEPAATCLEAVLEQTGYLAALRASKDIQDESRVENLSELLDAMVEFETENPGAD---- 680 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDEL---AQRLDQERISQRFLAGPVNICTLMPMRSI 670 + + D++P E + ++ G V + TL + + Sbjct: 681 --LEQFLEHVALVADADSIPNRPASAEGESASAAQIAAEAAEAKAQGMVTLMTLHTAKGL 738 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 F VV L GM G++P Q A D ++R L L A ++LY++ Sbjct: 739 EFPVVFLTGMEHGLFPHQRA------------LTDEKEMSEERRLAYVGLTRAMERLYLT 786 Query: 731 YIGRSIQDNSER--FPSVL 747 + PS Sbjct: 787 RSETRTMWGKSQFNPPSPF 805 >UniRef50_C8W206 ATP-dependent DNA helicase PcrA n=2 Tax=Clostridiales RepID=C8W206_DESAS Length = 737 Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 71/430 (16%), Positives = 144/430 (33%), Gaps = 70/430 (16%) Query: 376 FHVCHSPQR--EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 VC S E + +++ L ++ + V+ Y Q+ V Sbjct: 326 IIVCKSRDEFAEARHVVEQIKH-LHLVEGVSYSECAVL------YRTHAQSRVLEEIMLR 378 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 LPY I ++ I+ L + + + +++VP R I + L Sbjct: 379 YGLPYNIIGGLRFYERKEIKDVIAYLRVIVNPADEVSLSRIINVP----RRGIGDVSLTK 434 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 + + E+GI G+ + + +P + LLG + W+ + Sbjct: 435 IFAFAAEAGIPAGLAMEMAEQ--IPGLNGKARKQAA---LLGSLL----QVWRRQQEFLP 485 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 + L +++ +R+ L E +E + + L F + + Sbjct: 486 VTDLTVDILER--------TGYRQELEYEGTVEARTRL--ENLEEFLSVT--RLYDLETV 533 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 E ++E L + A VN+ TL + + F Sbjct: 534 EGTLGEFLSEL--------------------SLVTDADRDNGEAERVNMMTLHTAKGLEF 573 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 V L+ M +G++P A D +++R L + A+QKLY+SY Sbjct: 574 PFVFLVAMEEGIFPHNRA------------LSDAGELEEERRLAYVGMTRARQKLYLSYS 621 Query: 733 GRSIQDNSER--FPSVLVQELI-DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 + + PS ++E+ D + +H + +N + + + + P Sbjct: 622 FQRTIYGNTNYCRPSRFLEEIPVDLVSGAHPYEERQKINTQVKKQQETSKRNQTTVKKPA 681 Query: 790 DPQNYQPGER 799 QN+ G++ Sbjct: 682 AGQNFVLGDK 691 >UniRef50_A4RXK7 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RXK7_OSTLU Length = 657 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 62/458 (13%), Positives = 126/458 (27%), Gaps = 70/458 (15%) Query: 327 VDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREV 386 ++L + A A + F + P + + + E Sbjct: 260 FKDVQTHMLTTNYRSTATIVEAAQAVIKESAFPSPLDLVANTPGGRDVAIVEANDDREEA 319 Query: 387 EVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISDRRAR 445 E + ++EDP L +I V+ Y QA V A +P+ + + Sbjct: 320 EFIALEARKSVKEDPDLRYSEIAVL------YRTNSQARVLEEAFIRAGVPHKVIGDTSF 373 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 ++ I+ L + + + + +++ P I + L W++ Sbjct: 374 YGRKEIKDMIAYLRVVSNSADTVSLNRIINTP----TRGIGNSTIEKLSAWIDT------ 423 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 + G +LP E GL + Sbjct: 424 -------------------------------LPKTDGT--ELLPSAEEMGLTTRARSAVL 450 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE--- 622 + R P E + + + DA+ Q+ + E Sbjct: 451 KFSQLMAETREKAKSSTPGELLEAIIKCTGYDTLVQDADDGNERWAFVQELINLAKEPPQ 510 Query: 623 GLGAQYGDAVPLSLLRDELA--QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 + D V L L L L + V + T+ + + F V + G+ Sbjct: 511 DIDETIQDRVGLEALGSFLEGISLLTSAESKEEEGGDTVKLMTMHASKGLEFNSVFISGV 570 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 +G+ P D +D++ LF + A++KL + + + Sbjct: 571 EEGLIPFVRNGDSED------------DQDEEVRLFYVGITRAKRKLMLCHARERRRFGQ 618 Query: 741 ERFP---SVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 P S L+ + + S ++ Sbjct: 619 SAQPARRSFLLDSISAMLTGSKKPERSVSIPSTSRGKA 656 >UniRef50_D0BN23 ATP-dependent DNA helicase PcrA n=5 Tax=Firmicutes RepID=D0BN23_9LACT Length = 755 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 56/388 (14%), Positives = 126/388 (32%), Gaps = 69/388 (17%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 IT++ S Q E + ++ ++L + D ++ Y Q+ V Sbjct: 310 ITYYRAQSEQDEGRYVLSQIQSLLRD--GYHYDDFAIL------YRTNAQSRVMEENLLK 361 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +P+ + + ++ ++ L L + +++ P + I L Sbjct: 362 SNIPFRLVGGQRFFERLEIKDLLAYLRLIVNPQDDLSFRRIVNSP----KRGIGATSLDK 417 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L + + Q + S + Sbjct: 418 L--------------------NDFASMHQFSLLEA-----------------SSQIAISP 440 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 SG A+ + A ++ L + L+ +E+ + L A A Sbjct: 441 LSGKAAKALEKFAEMIEDLRKMQEFLSISEFVEQVIEK-TGYLAALEQQHTMEADARIEN 499 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ-RLDQERISQRFLAGPVNICTLMPMRSIP 671 Q++ ++ + + + S L L L + S V + TL + + Sbjct: 500 IQEFISVAKQFEQDRLEEESEDSPLLQFLTDLSLVSDADSDDGDGRMVTLMTLHAAKGLE 559 Query: 672 FKVVCLLGMNDGVYP--RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 F VV ++G+ +G++P R + G D+ +++R L + A+QKL++ Sbjct: 560 FPVVFIIGLEEGIFPSLRSIMENGDDV-------------EEERRLAYVGITRAEQKLFL 606 Query: 730 SYIGRSIQDNSER--FPSVLVQELIDYI 755 + + + PS + E+ + + Sbjct: 607 TNAYSRLLYGRTQTNRPSRFLLEIGEDL 634 >UniRef50_Q2S550 ATP-dependent DNA helicase pcrA n=2 Tax=Rhodothermaceae RepID=Q2S550_SALRD Length = 786 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 56/432 (12%), Positives = 134/432 (31%), Gaps = 80/432 (18%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 + S + E + + R+ + D + D V+ Y Q+ A Sbjct: 338 VALMEALSEKDEAQKIERRVRDLHLRD-GMEYGDFAVL------YRTNAQSRAIEEALRK 390 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY + + ++ ++ L L + + + +++ P I ++ Sbjct: 391 ENVPYRVIGGTSFYERKEIKDVLAYLKLLVNPNDTASLQRVINYP----TRGIGDKTQAR 446 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L+++ + + WQ+V +E Sbjct: 447 LQRYAQQH---------------------------------------SLSLWQAVERVEE 467 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 L + + + + + RD++ L + Sbjct: 468 IETLGTRAERAVGKFRRLIARYASKAGTGSVPAD--ELARDLIQDAGLLSELRKEHTREN 525 Query: 613 EQQWQAIIAE----GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 Q+W+ + + + +S E+A DQ+ + V + TL + Sbjct: 526 LQRWENVQELISALAEYVESTEDATISTFLQEVALMTDQDEAEEG--DDKVTLMTLHAAK 583 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 F VV + G+ +G++P + A +++ +++R LF + A+++LY Sbjct: 584 GTEFPVVFVAGLEEGLFPLEQATQ------------EKAELEEERRLFYVGVTRAEERLY 631 Query: 729 ISYIGRSIQDNS--ERFPSVLVQEL-IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 +S+ + S ++E+ D + ++ + +E A Sbjct: 632 LSWARSRYRYGEQTSNTRSRFLEEVDSDVVRTEAGGELEQQTDRFSAEEGPSADYDE--- 688 Query: 786 RMPFDPQNYQPG 797 DP Y+ Sbjct: 689 ---MDPHYYRQD 697 >UniRef50_A7KV33 PcrA helicase n=1 Tax=Bacillus phage 0305phi8-36 RepID=A7KV33_9CAUD Length = 657 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 51/394 (12%), Positives = 122/394 (30%), Gaps = 77/394 (19%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 I + ++E + + + D DI ++ Y +Q+ + Sbjct: 331 IRKYEAPDDEQEARFIAQEIQNLCTFD-GYKYEDIALL------YRTNVQSRLLEDQFIR 383 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY + + ++ +S + L + +L++ + + ++ Sbjct: 384 HNIPYNMVSGFSFYERKEIKDIMSWMQLAVNPDNDIACDRILNMQA-----GVGKTTIKQ 438 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 ++ A E + ++ V ++ Sbjct: 439 IKD---------------------------------------KANEKNKSIYEVVEYFNP 459 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQ--ERPLEEWLPVC---RDMLNAFFLPDAETEA 607 + L + +LN ++P+ + L + + E + Sbjct: 460 KTAKAKAAFVGLTDTVARLNALYEAGKSVSDQPITDMLELIFKYTQYIEKLQETGKEEDF 519 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 ++ I L+D L Q Q + + V + TL Sbjct: 520 RRIDNIKELTKIAKGYEQENKD-----PHLQDFLDQIALQSQQDKVVNQDKVQLMTLHTS 574 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + + VV ++GM +G++P + D + +++R L + AQ+ L Sbjct: 575 KGLEYPVVFMIGMEEGLFPHSRS------------LSDTVQLEEERRLAYVGITRAQEIL 622 Query: 728 YISYIGRSIQDNSE---RFPSVLVQELIDYIGQS 758 Y ++ R + N + PS ++EL D + Q Sbjct: 623 YFTHAERRMDYNRTYNWQTPSRFMEELPDELIQE 656 >UniRef50_B2V7G3 UvrD/REP helicase n=5 Tax=Aquificales RepID=B2V7G3_SULSY Length = 706 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 54/432 (12%), Positives = 126/432 (29%), Gaps = 81/432 (18%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 IL+ N ++ + + I + + E + +++ + ++ Sbjct: 286 ILDCANAVISKSKGKWKGKVLTLWTDKEEGEDIFLVPLENEKEEARFIANKIKQLAQDG- 344 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 + D V+V + + I+ F +PY + ++ ++ L L Sbjct: 345 --SYGDFAVLVR-MTFLTRNIEEAF----ISNGIPYQVIGGLKFFERAEVKDILAYLKLA 397 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 + L VP + ++GL Y++ + + Sbjct: 398 VNPKDYASFERSLTVPP----RGVGDKGLEYIK-----------------------SNFK 430 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR--GLA 579 W L D + L L + + Sbjct: 431 TDWIQALK---------------------DSYERFNKSVKIKLQEYLELMEYVLENAKFS 469 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 + +E + + E E + +I A+ + Sbjct: 470 PSKTAKEIVERI--GYQEYLQ--KEYEKDWEDRVENINELIIALEEAEKEGKTLDQFFEE 525 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 + +Q I T+ + + F V + G+ +G++P A FD Sbjct: 526 SALMQAQDTIDNQ----NKAKIMTVHGAKGLEFDTVFVAGLEEGIFPSGRA---FD---- 574 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP---SVLVQELIDYIG 756 D ++ +++R LF A+ A+ KLY++Y ++ P S + ++ ++I Sbjct: 575 -----DPTQLEEERRLFYVAITRAKNKLYLTYAKERKSYGNKSVPTKRSQFIDDIKEHIK 629 Query: 757 QSHYLPGDEALN 768 ++ Sbjct: 630 LPVKQKTQPNVS 641 >UniRef50_A9M0G6 ATP-dependent DNA helicase n=38 Tax=Betaproteobacteria RepID=A9M0G6_NEIM0 Length = 690 Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 56/412 (13%), Positives = 126/412 (30%), Gaps = 67/412 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAM-LEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPA 431 + C + Q E + + +++ L D V+ Y QA +F A Sbjct: 329 VKVVACQNEQHEADWVVSQIVKQKLIGGDKTQYADFAVL------YRGKHQARIFEEALR 382 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +PY +S ++ ++ +S + L + L + P + I + L Sbjct: 383 GARIPYRLSGGQSFFDKAEIKDVLSYVRLLANPNDDPAFLRAVTTP----KRGIGDVTLG 438 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 L +T YA E +++ + Sbjct: 439 KL----------------------------NT-----------YAHEHECSLYEAAQNEE 459 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + L HL + + +R E + ++ L E A + Sbjct: 460 ALATLNNTNRQHLQAFMDMFGSYRAKAETGEAGEFINSLLEEIDYENHLMQNEEGKAGEI 519 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + +++ D + L + + V++ TL + + Sbjct: 520 KWRNVSDLVSWFARKGGEDGKNIIELAQTV-ALMTLLEGKDEEETDAVSLSTLHAAKGLE 578 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 + V L+G +GV P + ++ +++R L + A+++L +++ Sbjct: 579 YPYVFLVGCEEGVLPHNDSIEEGNV-------------EEERRLMYVGITRAKRQLTLTH 625 Query: 732 IGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 + + + + PS + E+ + G E + E R A + Sbjct: 626 CVKRKKQGTWQFPEPSRFIDEMPQEDLKILGRKGGEPIVSKEEGRRNLADII 677 >UniRef50_Q5NVY5 ATP-dependent DNA helicase n=2 Tax=Archaea RepID=Q5NVY5_9ARCH Length = 1075 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 100/656 (15%), Positives = 186/656 (28%), Gaps = 110/656 (16%) Query: 357 EFSRSDNKRPLDPLDSS----ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 + ++D+ R L D + + + + + + +L + P +I V+ Sbjct: 349 NYQKADDARLLQAFDHREGTRVMLLKTLNQNEQARRIVEEIDRLLA--EGVAPEEIAVLF 406 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 S P +A R +PY +S P + ++ L Sbjct: 407 RSYSSLRPI-----EAALKQRAIPYQVSTTTGFLKRPEIRTALAYL-------------- 447 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 + A ++ G L W R+G+ H R Sbjct: 448 -----YVLASLEMPRHGADQL--WYKLLQYRYGVSIR----------DVHLLSAAAKR-- 488 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP--LEEWLPV 590 Q VL GL E + L+ ++ R +E P L + Sbjct: 489 ---------DSIQGVLTGSLPRGLSEEGRVKIRHLVDRIMELRASTNKELPDLLLDIYE- 538 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 + F ++ L + I+ D + L + D + Sbjct: 539 LSGLSREFTHDNSSESKTSLLNLKALHDIVTGFQDLYGTDLQGFIEYVELLDEIGDDGEL 598 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA--------------PLGFDL 696 ++ AG V + T + + + V ++ + +P F L Sbjct: 599 PRQEKAGGVVLKTCHGAKGLEYSHVFVVDLAKDKFPLSRGGREPLVPDQLNDRYADVFSL 658 Query: 697 MSQKPKRGDRSRRD-----DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV--- 748 + + + R+ ++R L A A+ +LY+ Y SER PS+ + Sbjct: 659 PEAEIEEALKKRKQDFKLKEERRLAYVAFTRAKDRLYLCYPAS--YGESERPPSMFIAEA 716 Query: 749 ----QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN-YQPGERQSYA 803 EL + A+ +S+ K + D + Y Sbjct: 717 CYNSGELHPDMELVEDAEEKAAVATRDSDLDRKKNEIKRQILSTIDSEPDLALYNLLLYQ 776 Query: 804 RE-------WLPAASQAGKAHSEFVQPLPFTLPE---------TVPLETLQRFWAHPVRA 847 P A+ AG+ + L +P + L+ + P + Sbjct: 777 HLCGRPIAINCPQAAMAGEEAAVIRAELDAGIPRGMQFDPKEVRLSYSGLKTYEECPKKY 836 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDL 907 Q L + RT+DSE F Y L + E L L Sbjct: 837 ELQYLLNIPSRTKDSEGESPLSF-----GNYIHKTLELAVKQQISTREELDAIAEKTSLL 891 Query: 908 PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME--IDLACNGVQITGWLPQVQP 961 P F + + + R + +E + +G Q TG + +V Sbjct: 892 PD--FAGVDKDKAKRIFDVFWARNKDTIRRSVGVEQFFNFTMDGFQFTGKIDRVDQ 945 >UniRef50_Q67KI7 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67KI7_SYMTH Length = 825 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 62/438 (14%), Positives = 127/438 (28%), Gaps = 70/438 (15%) Query: 377 HVCHSPQREVEVLHDRLLAMLE----EDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPA 431 + E + + ++ + L +D V+ Y Q+ A Sbjct: 363 FTAADERDEAAFVAREVERLVAEGLPDGTRLDYQDFAVL------YRTHAQSRALEEAMV 416 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 R +PY I ++ ++ L + + + VP + I + Sbjct: 417 RRSIPYGIYGGLRFFERKEIKDVLAYLRIIANPADIVSFRRAVGVP----KRGIGPATVD 472 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 L + + W+ + L +M Sbjct: 473 KLVDYAEQ------------------------WQVPVALAALDCSM------------VP 496 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 SG + + +L+ +L + ++ L +L + AA Sbjct: 497 GLSGTYQKRMEEFGALIEELTNLSAHCTVGQLIDAVLER-TGILEELRADTSLEAAARLE 555 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ-RLDQERISQRFLAGPVNICTLMPMRSI 670 Q+ +++ AE + L L LA L + V + TL + + Sbjct: 556 NVQELRSMAAEFEPPAGEELDGLRDLDSFLATVALLTDADQVGEGQNKVTLMTLHSAKGL 615 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 F VV L+G+ +GV+P A D + +++R L + A+ +LY++ Sbjct: 616 EFPVVFLVGLEEGVFPHNRA------------LTDEVQMEEERRLCYVGMTRARLRLYLT 663 Query: 731 YIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP 788 + PS + E+ + + + + A Sbjct: 664 NAVSRNLWGQSNYNAPSRFLLEIPAELVEEVTPAAGASGPRRSAWDDGAAW---EDAGAA 720 Query: 789 FDPQNYQPGERQSYAREW 806 + G R + REW Sbjct: 721 VRRPAWDGGARAARRREW 738 >UniRef50_Q6MAS4 Probable ATP-dependent DNA helicase, mutU n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MAS4_PARUW Length = 668 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 60/394 (15%), Positives = 127/394 (32%), Gaps = 60/394 (15%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I + E +V+ R++ M +E L +D ++ S + F +A + Sbjct: 315 IEVFHTPNELEEAQVVVKRIVKM-KESLNLQWKDFAILYR-----SNALSRQFETALMRQ 368 Query: 434 ----------YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 +PY I ++ + L L + E +L +++ P R Sbjct: 369 VWKFQNRWIQGIPYEIFGGTEFYERKEVKDLCAYLRLIINPADQEALLRIVNQP----RR 424 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 I E+ L L + ++ + G + G A + E Sbjct: 425 GIGEDSLDLLTTHNRQF---------QRPLWDVLKEVANQKGEGAKLIYHGKAFKGI-CE 474 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 + ++ + L +L L+ Q+N +++ + +E ++ + + F A Sbjct: 475 FTHLISEAKKRFQEGNLAENLKWLIEQIN-YQKAIKEEVKSQQMRDFKWENIQEFVSSLA 533 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 E E L ++ + + V++ T Sbjct: 534 EFEQQAQLNPDLESSLENFLGNMYVDNKF--------------NQSTKNNRHEDRVSLLT 579 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISA 723 + + F V L+GM D + P + + + +++R L A+ A Sbjct: 580 FHSAKGLEFPVCFLVGMEDHIIPHEKSMKE-------------TGIEEERRLMYVAITRA 626 Query: 724 QQKLYISYIGRSIQDNSER--FPSVLVQELIDYI 755 QQ L IS + + + PS + E+ + Sbjct: 627 QQHLTISMAQQRKRMGKDMASRPSRFLFEIPKEL 660 >UniRef50_A5GA79 UvrD/REP helicase n=10 Tax=Desulfuromonadales RepID=A5GA79_GEOUR Length = 678 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 56/397 (14%), Positives = 118/397 (29%), Gaps = 74/397 (18%) Query: 401 PTLTPRDIIVMVADIDSYSPFIQAV-FGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 L D ++ Y Q+ F +PY + ++ IS L Sbjct: 343 HNLAYSDFAIL------YRTNAQSRPFEEQLRFEDIPYVLIGGMQFYERKEVKDAISYLK 396 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + + +L +++ P R I + + + QW Sbjct: 397 VIGNSNDEIALLRIVNFP----RRGIGDSTVVKINQW----------------------- 429 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 +ME ++ +E G++ + L + Sbjct: 430 ----------------SMEQGCPLLEAFGRVNEIEGIVEATRNRVQDFYRLLQGAVEEFS 473 Query: 580 QERPLEEWLPVCRDML--NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 E L E L + A + + II A Y + +P L Sbjct: 474 GEGDLAEKGRRLFKQLGLEDELYRTIDDPALARRKVENVEQIINSM--AAYEERIPKPTL 531 Query: 638 RDELA--QRLDQERIS----QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 L +D++R S + V + +L + + F V L+GM + + P + + Sbjct: 532 SGFLEKVSLMDEDRFSGKDKKEHGRDAVTLMSLHSSKGLEFPYVFLVGMEEEILPHKRS- 590 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQ 749 + D++R L + A++ L ++ + + ER PS ++ Sbjct: 591 -----------IYEDFTVDEERRLCYVGITRARKHLIMTRCLQRKKYGKLQERVPSRFLE 639 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 E+ ++ + L +E++ + Sbjct: 640 EIPGHLLNEQKGAAAKVLTEEEADKMAHDSFARIKAM 676 >UniRef50_B9KXW3 ATP-dependent DNA helicase pcrA n=2 Tax=Thermomicrobia (class) RepID=B9KXW3_THERP Length = 771 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 85/566 (15%), Positives = 164/566 (28%), Gaps = 103/566 (18%) Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWG 304 + YW D + +R D + L R E + + L Sbjct: 204 QSYW-DEVAARVYERYAQYLQRAQAVDFDDLLLRTVELFTEYPDVLAHYQDRWRYL---- 258 Query: 305 KLGRDYI-------YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 +Y L+ L S V ++ Q+DI + + Sbjct: 259 -QVDEYQDTNRLQYQLVRQLASGHRNLCVVGDPDQSIYSWRQADIRNILEFQRDFPDATV 317 Query: 358 FSRSDN----KRPLDPLDSSITFH---------------------VCHSPQREVEVLHDR 392 N + + D+ I + C Q+E E++ Sbjct: 318 IRLGRNYRSTPQIVAAADAVIRVNRQRIERPLWTENPPGPPIRLLACWDEQQEAEMVVSE 377 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 + L RDI V+ I++ S ++ A R +PY + ++ Sbjct: 378 I-DRLVRTGNARYRDIAVLYR-INAQSRSVE----EALVRRQIPYQVIGGVRFYERKEIK 431 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 ++LL + + + +L I E+ L L QW + Sbjct: 432 DALALLRVLVNPRDWLSLRRVLSETAFGR--GIGEKTLLQLEQW------------GQRQ 477 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 + A V +E+ L A V L L +L Sbjct: 478 QC-----------------------SPADVLLLLVEEREEAPALAAATVRRLRELGGELV 514 Query: 573 IWRRGLAQERPLEEWLPVC---RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 R + E P + + + + TE Q ++++ Sbjct: 515 RLRAAM-VEHPASQLFDLALERSGLAARYRDASDPTERERWENLVQLRSVLERYDTVPAA 573 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 + +PL L L +D+ +S V + TL + + F VV L+G+ +G+ P Sbjct: 574 EGLPLFLEEAALVAAIDEAEMS----GDQVTLLTLHAAKGLEFPVVFLIGVEEGLLPHAR 629 Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVL 747 A + ++ + F + A+++LY+SY + PS Sbjct: 630 ALESEAELEEERRL------------FYVGITRAKERLYLSYCSSRNRFGLRERCLPSHF 677 Query: 748 VQELIDYIGQSHYLPGDEALNCDESE 773 + +L + ++ + Sbjct: 678 LDDLPPDVVEAGSRASERVPRVAPPA 703 >UniRef50_Q256I8 DNA/RNA helicase n=17 Tax=Chlamydiales RepID=Q256I8_CHLFF Length = 636 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 58/436 (13%), Positives = 139/436 (31%), Gaps = 80/436 (18%) Query: 339 QSDILELENRAVAGVNIEEFSRS---DNKRPLDPLDSS-------ITFHVCHSPQREVEV 388 Q+ +L LE + NI + + +N L S I + + + E E Sbjct: 266 QARVLRLEENYRSYGNILNAANALIQNNASRLKKNLRSVKGPGEKIRVFLGKTDKDEAEF 325 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISDRRARQS 447 + + L + + RD + Y Q+ F A R +PY I + Sbjct: 326 VASEIYR-LHKRSNIPLRDFCI------FYRTNFQSRTFEDALLRRRIPYEILGGLSFYK 378 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID 507 ++ ++ L + ++ +++P + + + L + + Sbjct: 379 RKEIQDILAFLRMFTAKCDVVAFDRTVNLP----KRGLGPSAISSLIDYALTNN------ 428 Query: 508 DDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567 R L + + + +G W + + + + Sbjct: 429 ----------LPILEACRNALETHSVKLSKKQQEGLWSYLSIFQQLERAYTLPLNEFVIA 478 Query: 568 LMQLNIWRRGLAQ-ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 +++ + + L + E+ ++ + F E E ++ + + Sbjct: 479 TIRITGYLQVLKEDPDTFEDRKSNLDELASKTF------EWEQQNTEGTLESFLDDL--- 529 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 L +A VN+ T+ + + F++ ++G+ + ++P Sbjct: 530 -----------------ALKSSTDETELIADRVNLMTIHNGKGLEFRIAFVVGLEENLFP 572 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FP 744 + +G+ +++R L + AQ LY++ + R P Sbjct: 573 HANS------------KGNYENLEEERRLCYVGITRAQDLLYLTAAQTRFLWGTVRVMKP 620 Query: 745 SVLVQEL-IDYIGQSH 759 S ++E+ DY+ Q H Sbjct: 621 SRFLKEIPRDYLIQVH 636 >UniRef50_P45612 Probable DNA helicase II homolog n=4 Tax=Mollicutes RepID=UVRD_MYCCT Length = 722 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 51/390 (13%), Positives = 131/390 (33%), Gaps = 79/390 (20%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + C+S E + ++ ++++ +DI ++ ++++S F A++ Sbjct: 323 VVLKECNSKTSEASYVSSKIKELVKQ--GYHYKDIFILYR-MNAWS----QEFEKELANK 375 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPD--SRFVSEDVLALLDVPVLAARFDITEEGLR 491 +P+ + + V++ ++ L + S+ VL ++ +IT Sbjct: 376 KIPFQLIGGIKFRERKVIKDAMAFLKMISIKDNLSSQRVL-----GLIPKIGNIT----- 425 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 + + +N + + +++ +L T +T Sbjct: 426 -IEKIINTANL------NHLNIFDLITNEDKTLLHSIT---------------------- 456 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLP--DAETEA 607 +L L+ + +EE L + + + Sbjct: 457 ----------KNLDELIEVFKTAHQLYLDNTNIEEILKYLLIQSGYENKLKIRKEQDDLE 506 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + + Q + + Y + + L L + I + V++ T+ Sbjct: 507 NINALYDQLKRFDEDFDPKYYSEE---NKLIAFLQEEALTSDIDEAEQIDKVSLLTVHAA 563 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + KVV + G+N G++P +++ + +++R AL A+ +L Sbjct: 564 KGLENKVVFITGLNQGIFPSRISETSIN------------ELEEERRALYVALTRAKDEL 611 Query: 728 YISYIGRSIQD--NSERFPSVLVQELIDYI 755 +++Y+ SE PS + EL + Sbjct: 612 FLTYVKGDYSHIMQSELKPSKFIHELDKDL 641 >UniRef50_C6NVE2 ATP-dependent DNA helicase Rep n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVE2_9GAMM Length = 663 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 70/442 (15%), Positives = 134/442 (30%), Gaps = 72/442 (16%) Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA-MLEEDPTL 403 L+ + L D I V E E + + +L + Sbjct: 286 LQAANHLIAHNPHLFEKKLWSSLGEGDR-IQVIVARDETDEAEQVVNAILRDRFQRQGE- 343 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 RD ++ P F +A + +PY +S + + F++ L + Sbjct: 344 -YRDYAILYRSNHQSRP-----FETALRNARIPYQLSGGISFFERSEIRDFLAYCRLLAN 397 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 L ++ P R I L L G + A Sbjct: 398 PDDDAAFLRAVNTP----RRGIGSATLETL-----------GEHAKARQMSLFAAL---- 438 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 W L L + L S LN A+ Sbjct: 439 WEEDLD--------------------------LAERPLLALRSFGDWLNRTAEACARSEL 472 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG--AQYGDAVPLSLLRDEL 641 + + ++ +L + E + + ++A Q L+ L + L Sbjct: 473 MPTLRDLLEEIGYRRYLENEGDEREARRKWENLEELLAWMARLLEQEDGPKNLAELLNRL 532 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 + ER + + TL + + F V L+G+ + + P + + Sbjct: 533 SVIHILERDEDDEERDVLRLSTLHGAKGLEFSRVFLVGVEEELLPHRNSET--------- 583 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQEL-IDYIGQS 758 ++ +++R LF + A+ KL +SY R + + PS +QEL + + + Sbjct: 584 ----PAQIEEERRLFYVGVTRARHKLSLSYCRRRKRYGEAQAPEPSRFLQELPRELLDWA 639 Query: 759 HYLPGDEALNCDESEARVKAHL 780 EAL+ + +R++A L Sbjct: 640 SGAEEQEALSATAACSRLRALL 661 >UniRef50_A5CU47 ATP-dependent DNA helicase n=4 Tax=Actinobacteria (class) RepID=A5CU47_CLAM3 Length = 816 Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 60/397 (15%), Positives = 117/397 (29%), Gaps = 63/397 (15%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISDRR 443 E + + D + + + +I V Y Q +PY I Sbjct: 381 EAQFVADEIQKL--HEEGTAYSEIAV------FYRTNAQTRALEEILIRSAVPYRIMGGT 432 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 ++ ++ L + + +L+ P + I L + G+ Sbjct: 433 KFYERAEIKDAMAYLVAVANPADVLALRRILNTP----KRGIGPATETALANFAESHGVT 488 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 + EL L L+RML A+ + + + E G Sbjct: 489 FREAMRRASELGLGPKVTQAIL-ALSRMLDEVALLLDPDRPEGRTSVGDLVTTLLEKSG- 546 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 + R +A AE + + +++ EG Sbjct: 547 -----------------------LVQALRASKDAQDEARAENVEELVAVTKEFSRNNPEG 583 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 + V L DEL +G V++ TL + + + V L G+ + Sbjct: 584 QLVDFLTEVSLVAAADELDDS-----------SGTVSLMTLHTAKGLEYDSVFLTGVEED 632 Query: 684 VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER- 742 + P +++ + G + ++R LF + A+++L+IS Q Sbjct: 633 LLPHRMSAN---------EPGGPA---EERRLFYVGITRARRRLFISLAMTRAQFGEVNV 680 Query: 743 -FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 PS +QE+ + PG + A Sbjct: 681 AMPSRYLQEIPAELIDWKQSPGMATSRGGTQPRALNA 717 >UniRef50_A9GM05 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GM05_SORC5 Length = 1171 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 74/433 (17%), Positives = 132/433 (30%), Gaps = 75/433 (17%) Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 + EW + A+ E+ A++AE + V L +R Sbjct: 579 GERATFGEWQRRLSAL----------ATRALRRPERVL-AVLAELAPMAHVGPVDLGEIR 627 Query: 639 DELAQRLDQERISQRFLAGP-VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF--D 695 L++RL + + + + R F VV + G+ + ++P+++ D Sbjct: 628 LCLSRRLTDLVLPPAARRDGRLFVSPIEGARGRSFDVVFVPGLAERIFPQKVTEDPILRD 687 Query: 696 LMSQKPKRGDR------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 + + GD R +R A+ +A+Q+L +SY + + R PS Sbjct: 688 ALRRTIAGGDSGLDTSDDRVARERLALRLAVGAARQRLVVSYPRVDMDQSRPRVPSFYGL 747 Query: 750 ELIDYIGQSHYLPGD----------------EALNCDESEARVKAHLTCLHTRMPFDPQN 793 EL+ G+ +++ + L L T F Sbjct: 748 ELLRAAEGRLPGFGELERRAEQGGAARIGWPAPARPEDAIDAAEHDLALLETL--FSLPE 805 Query: 794 YQPGERQSY---------------AREWLPAASQAGKAHSEFVQPLPFTLP-----ETVP 833 Q Y AR W+P + A + + Sbjct: 806 AQTVGTARYLLNANPHLARALRFRARRWIPGWTSADGLFKPIAEAREALAKHAFGRRSFS 865 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD 893 LQ F A P R F ++ R I + L+ L R ++ +L Sbjct: 866 PTALQHFAACPYRFFLYAVHKLAPRPAPEAIEE-----LDPLQRGRLVHDVLY------- 913 Query: 894 AERLFRRFRAAGDLPYGAFG-EIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQ- 951 + R AG LP G + + + ++A R P D V+ Sbjct: 914 --EVLVALRDAGKLPLGLPALDEARAELDRALDRVAARYADELAPAIRRVWDDGIASVRA 971 Query: 952 -ITGWLPQVQPDG 963 + WL + D Sbjct: 972 DLREWLRRAAEDR 984 >UniRef50_A4IYZ2 ATP-dependent DNA helicase/UvrD/REP helicase n=21 Tax=Francisella RepID=A4IYZ2_FRATW Length = 671 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 68/439 (15%), Positives = 145/439 (33%), Gaps = 77/439 (17%) Query: 335 LHNIQSDILELEN-------------RAVAGVNIEEFSRSDNKRPLDPLD--SSITFHVC 379 L ++Q D +L+ VA IE S +K+ D I Sbjct: 258 LRHLQEDFADLKVIKLEQNYRSTGRILNVANKLIENNSHIFDKKLWSNKDYGEQIKVISL 317 Query: 380 HSPQREVEVLHDRLL-AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 + + E + + + ++ D V++ +Y ++ +PY Sbjct: 318 INDEDEAQFIASDIFFDRVKTKS--KNSDYAVLIR--SNYQAYL---LERYMQMHKIPYT 370 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 IS + S ++ IS L L + L +++ P + ++ + L ++ + Sbjct: 371 ISGGSSFFSKAEIKDIISYLRLIVNPDDDRAFLRVINTP----KREVGSATVHKLGEYAS 426 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 + + L + R R L+ + + + +S + Sbjct: 427 QHHCSF--------FHTLYSLENFELRDFTKRNLISF-----KDLILNTQQQINTSISVQ 473 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 EL + S + ++ R L + + E I + + Sbjct: 474 ELKNIINSFIDNIS------------------YRQWLIDSSSSEKQAEFRYANIIEVTKW 515 Query: 619 IIAEGLGAQYGDAVPLSLLRD--ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 I+ + Y L+ + + L LD++ + V I T+ + + FK V Sbjct: 516 IVNQLEDESYNGLESLATVLNKMLLIDILDRDNEDKN--DNQVQIITMHASKGLEFKKVY 573 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 ++GM +G+ P Q + +D+R L A+ A++ L I+ Sbjct: 574 IMGMEEGILPHQQSIED-------------DSIEDERRLAYVAITRARENLTITMTKHRK 620 Query: 737 QDNSER--FPSVLVQELID 753 + ++ PS + EL + Sbjct: 621 KFGEKQVSVPSRFIDELPE 639 >UniRef50_D0LIZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIZ3_HALO1 Length = 688 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 64/420 (15%), Positives = 130/420 (30%), Gaps = 63/420 (15%) Query: 368 DPLDSSITFHVCHS-PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 D D + H + + E + + ++ D L RD+ V+ Y IQ+ Sbjct: 311 DIADGAKIVHASATDTESEARFVAREIGDIVGTD-NLRYRDVAVL------YRSNIQSRL 363 Query: 427 -GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 + +PY + + ++ I+ L L ++ + +++ P I Sbjct: 364 IEESLRSASIPYVMYGGQQFYERKEVKDLIAYLRLALNQRDEIALRRVINYPA----RGI 419 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 L+ + S WR + Sbjct: 420 GATTLKRVEDHARAS-------------------RTSMWR-----------------ILE 443 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD---MLNAFFLPD 602 ES + V + + + + R L + + D + + Sbjct: 444 GASQMAESDKMRPSTVQAIENFVAIIERTRASLDGGARIIDVTRRLIDEIQLYDDLRNAS 503 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ-RLDQERISQRFLAGPVNI 661 AA I ++++ Q L L + L + L E + V + Sbjct: 504 PSAAAAQRRI-DNVESLLRSLERHQEKRP-GLGALAEYLRRLSLAVESEAGEDPGNKVVL 561 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQL--APLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 TL + + F +V ++G+ + + P P D+M + ++R L Sbjct: 562 TTLHGAKGLEFPIVFMIGLEEEILPHARTLKPQATDVMDLDHV----TDVSEERRLAYVG 617 Query: 720 LISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 + AQ+KLY++ + R PS +QE+ + + + +E EAR Sbjct: 618 ITRAQRKLYLTRTQVRVSRGKNLPRTPSRFLQEIPAELLEERDIQAEERAPVSMGEARSL 677 >UniRef50_A0RUT2 Superfamily I helicase n=1 Tax=Cenarchaeum symbiosum RepID=A0RUT2_CENSY Length = 977 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 91/710 (12%), Positives = 193/710 (27%), Gaps = 110/710 (15%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLE---EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 + C E + DR++ + E + I V+ I F Sbjct: 313 VEIVECADEDSEAACIADRIVQIRSPGGESAGYS---IAVLTRKIAD-----GKKFSDEL 364 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 R +P S S ++ L + + + + LL + I E + Sbjct: 365 ELRGVPARYSGGDGIFSAGPARELLTYLEIARAPASAGGEINLL-----MKKHGIPEGDI 419 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 + + + + A G + Sbjct: 420 AVI-------------NTEAKKA----------------------AYNDIHGNDHVLEVI 444 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF--LPDAETEAA 608 LA L+ +L+ LA L F L D Sbjct: 445 RRGGNSGVRKKAELAGLVRRLDKVIT-LAGSYSPGTLAYHIAVPLAGLFRNLEDGAGAEH 503 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP-VNICTLMPM 667 + + L L L + + AG V + T+ Sbjct: 504 LREACRLATE------YDLLDPRGGLDGLVGYLWAANSDKNLRSDADAGGAVEVTTIHKS 557 Query: 668 RSIPFKVVCLLGMNDGVYP-----RQLAPLGFDLMSQKPKRGDRSR-RDDDRYLFLEALI 721 + F V + + P R+ L ++P+ ++ R ++R L A+ Sbjct: 558 KGREFDAVFIADAVEDRLPLKYKGRKYQVPTTLLHGRRPQGKEKDRHMQEERRLLYVAMT 617 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELI---DYIGQSHYLPGDEALNCDESEARVKA 778 A++ L I+Y +E PS ++E+ + + ++ G A + Sbjct: 618 RAKKNLCITYSKEYASKKTESKPSRFLEEMQFRSNPLVRTFVFAGGPAQGAGTASTVSGL 677 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP----------FTL 828 + D A E++ + Sbjct: 678 QEEAMRAVSVGDHGTAVQKVTDLAALEYMKEHGGLDGFVPPAARSPSPGLGAGAGPAKPA 737 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 P + + + P+ +F + + P P ++ G+ +++ +++ +A Sbjct: 738 PLRLSSTKIGTYKKCPLMYWFAHVMTI-------PSPPGIPMVMGGVI-HKVLEKITDAQ 789 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIF-WETQCQEMQQLADRVIACRQPGQSMEI---- 943 + + G L Y + +E +E + + + + I Sbjct: 790 MNGQTPDEAGALAMLEGQLKYAVYDSRTSFEQSKEEAESMISWFVKWSAGSPNKPIAVEK 849 Query: 944 --DLACNGVQITGWLPQV------------QPDGLLRWRPSLLSVAQGMQLWLEH---LV 986 +L G + G + +V G + P ++ + L+ E L Sbjct: 850 KFELEIAGAEFRGSIDRVERTPDGGLVLIDYKTGRTKVSPGKIAEDVQLNLYAEAAKKLY 909 Query: 987 YCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLL 1036 L + E+R + + A+ + + ++G REG P Sbjct: 910 KELPEKAVLLYLESGETVEYRLDEASVKSAIGRIEEYVDGIREGRFDPTP 959 >UniRef50_B1C8W2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8W2_9FIRM Length = 741 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 60/452 (13%), Positives = 130/452 (28%), Gaps = 69/452 (15%) Query: 355 IEEFSRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 IE R K D I + +S E ++ + L E + DI ++ Sbjct: 299 IEHNQRRMGKTLFTDNDEGEKIKYLNANSDLEESSLISREIF-CLNEYHGIPYSDIAIL- 356 Query: 413 ADIDSYSPFIQAV-FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 Y Q+ R +PY I ++ ++ L L + ++ Sbjct: 357 -----YRTNAQSRMLEEGLMRRNIPYQIVAGTKFYDRMEIKDILAYLKLIVNPQDDLALI 411 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +++ P + I + ++ Sbjct: 412 RVINTP----KRGIGPASVEKIKD------------------------------------ 431 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 YA ++ + D S + L + + RR ++ + Sbjct: 432 ---YAFMKGTSMYEVIKHIDSSPLFKGAIKEKLMNFRDTIEEIRRLPENNGLMDIVINTI 488 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 L + + E A +E + + A G + L + L S Sbjct: 489 HLSGYEEMLKEGKVENASNRLENLDELVNAAGDFESNEEENTLEAFLE--NAALVAGVDS 546 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 + V + TL + + F +V + GM + ++P + S ++ Sbjct: 547 YDEDSSKVLLMTLHNAKGLEFNIVFMPGMEENLFP------------TYRAVNEDSEMEE 594 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNC 769 +R L + A+++LY+S R PS + E+ D + + + + Sbjct: 595 ERRLCYVGITRARKQLYMSSAESRRVYGRNEYRNPSRFLLEVPDELIEGTNVIKESNKEK 654 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQPGERQS 801 + ++ +K ++ S Sbjct: 655 ELLKSSIKRIYDPYKQSPKKTENLFKQNNSFS 686 >UniRef50_D2PLA7 UvrD/REP helicase n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PLA7_9ACTO Length = 1076 Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 78/556 (14%), Positives = 150/556 (26%), Gaps = 73/556 (13%) Query: 331 PDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLH 390 LL ++ + L E R+ + + ++ + E+E + Sbjct: 326 GTTLLRVSRNVVNRLGVPGTLDRETFERFRNPDASGCVFGPGKVEANLYSTSGAELEHIA 385 Query: 391 DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS-DRRARQSHP 449 D LL + D+ V+V P ++ A A +P ++ D P Sbjct: 386 D-LLRRAHVQDGVAWHDMAVLVRSGSRSIPPLR----RALAAAGIPVDVAGDELPLSREP 440 Query: 450 VLEAFISLLSLPDSRFVSE-DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 + + L DV+ L + L A LR+ + + D Sbjct: 441 AVRPMLLALRAVADPATLTVDVVRALALSPLGAM------DAGQLRRL---ARVLRKRDR 491 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 + LP + R L LL + +L Sbjct: 492 EAAGGQRLPRSSDELLREALMEPLL-------------------LDEQASPAEARFVALG 532 Query: 569 MQLNIWRRGLAQERPLEE----------WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 +L R L +E WL R N+ + + + A Sbjct: 533 ERLLKARNILTAGAAPDEVMWSLWSESPWLRRLRGQANSGGEVARAANRDLDSLCALFDA 592 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + + L D R + V + T + + +++V + Sbjct: 593 AGRAEEQVGFKGVSAFLSELESLEIAADN-RYDATYRENGVQLMTAHRSKGLQWRLVVVA 651 Query: 679 GMNDGVYPRQLAPLGFDLMSQK------PKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 + +G +P + + ++R LF A+ A+++L ++ + Sbjct: 652 SVQEGQWPDLRRRGSLLEPDRLGPDGLVEPLSAGALLAEERRLFYVAITRARERLIVTAV 711 Query: 733 GRSIQDNSERFPSVLVQEL-----------IDYIGQSHYLPGDEALNCDESEARVKAHLT 781 D PS L+ EL + + + D + + + Sbjct: 712 QAPEADGD--QPSRLLAELDIPVKLVAGRPRRPLSLPGLVADLRCVLADPASSAALKRVA 769 Query: 782 CLHTRM---PFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQ 838 D + Y R W + K+ P P + L Sbjct: 770 ADKLAQLAEATDERGYPLVPTADPDRWW--GVRERTKSERPIAVP---DQPVPLTGSALT 824 Query: 839 RFWAHPVRAFFQMRLQ 854 P+R F Q R Sbjct: 825 TIVDCPLRWFLQRRAG 840 >UniRef50_Q1PY53 Strongly similar to ATP-dependent DNA helicase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY53_9BACT Length = 729 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 56/432 (12%), Positives = 132/432 (30%), Gaps = 72/432 (16%) Query: 326 FVDVTPDN---LLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSP 382 F PD LL + A + + ++ + + I C + Sbjct: 262 FEKDYPDARVVLLEQNYRSTKNILLAASSVIQKNKYRKQKEIWTENEHGEKIKTIHCENE 321 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISD 441 E E + + A+ + +I + Y Q+ A + +PY I Sbjct: 322 HSEAEEIAKTIRAL--RGNGIKYTEIAL------FYRTNAQSRTLEIALRNAGIPYVIVG 373 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 ++ ++ + L + + ++ P I ++ +++W Sbjct: 374 GVEFYRRKEIKDILAYIRLCVNPCDDSALERAINTPA----RGIGTTTVKKIKEW----- 424 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 + + T + G ++ E +G A + Sbjct: 425 ---------------AESRESTLFNAI-------------GIVDAI---HEVTGKSAAAI 453 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 L+M L + E+ L+ + ++ + + ++ Sbjct: 454 KRFYELIMVLRHMPET-SVEKTLKSIIDK-TGYIHFLRKSEEKESEDRIANVEELVNAAH 511 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 E L +E+A D + + LA V + TL + + F VV + GM Sbjct: 512 EYDANHTDG--SLQGFLEEVALISDLDTVED--LAEAVTLMTLHTAKGLEFPVVFISGME 567 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 +G+ P + + + + ++ + L + A ++L+++Y R ++ Sbjct: 568 EGLLPHSESRISEEEIEEERR------------LCYVGITRAMKRLFLTYTKRRMRYGQL 615 Query: 742 RF--PSVLVQEL 751 S + E+ Sbjct: 616 IPCVASRFLDEI 627 >UniRef50_C7N6W8 DNA/RNA helicase, superfamily I n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6W8_SLAHD Length = 772 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 53/410 (12%), Positives = 124/410 (30%), Gaps = 52/410 (12%) Query: 357 EFSRSDNKRPLDPLDSS-ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 R + + D I ++ + E + + + + ++ ++ V Sbjct: 298 NTKRKQKRLFTESGDGEKILVYMASDERDEGRWIAGEIDKL--HNEGVSYEEMAV----- 350 Query: 416 DSYSPFIQAV-FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 Y Q+ +PY I + I+ L+L + ++ Sbjct: 351 -FYRTNAQSRSLEDMLLRAGVPYRIVGGTKFFDRAEIRDVIAYLTLCINPADDMAAKRVI 409 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + P R I + + ++ S + + + L L Sbjct: 410 NQP----RRGIGKTTIEHIENVARNSNLTFMQAA----------------EWCLADETLQ 449 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 +A G + ++ +S G + + ++ + + L QER + + Sbjct: 450 MRTRNAIGGFVGLINDAQSYGGE---LRKVIEAVIDRSQLIQALEQERT--DEAESRIEN 504 Query: 595 LNAFFLPDAETEAAMTLIEQQWQ-AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 + F E + + E I + L + + RL + + Sbjct: 505 IKEFLSVVDEYVESHEIDESALPPEGINLLADTRQLSPDSLEDFLEWV--RLRTDLDAAT 562 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 V + T+ + + F V + GM + ++P + D +++R Sbjct: 563 DDDQFVTLMTVHSSKGLEFDCVFVAGMEETLFPHSNSSR------------DPQGLEEER 610 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYL 761 L A+ A+++LY++ S V E+ + +S L Sbjct: 611 RLAYVAITRARKRLYLTCAYARQIFGETHANPVSRFVGEIPSELRKSAGL 660 >UniRef50_D2RIV6 ATP-dependent DNA helicase PcrA n=6 Tax=Veillonellaceae RepID=D2RIV6_ACIFE Length = 750 Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats. Identities = 65/431 (15%), Positives = 139/431 (32%), Gaps = 78/431 (18%) Query: 339 QSDILELE----------NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEV 388 Q+ I +LE + A + R N + I ++ + E E Sbjct: 272 QARIFKLEQNYRSTQVILDAANEVIKHNAARRPKNLWTENGNGQPIAYYQARDDREEAEF 331 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPADRYLPYAISDRRARQS 447 + ++ + + D+ ++ Y Q+ F + +PY + Sbjct: 332 VVGQIRKL--QREGTKLGDMAIL------YRTNAQSRMFEENLINNGVPYVMVGSLKFYD 383 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID 507 ++ +S L + + + +++ P + I + +R + +SG+ Sbjct: 384 RKEVKDTLSYLRFLSNERDIQGLERIINEP----KRGIGAATVAKVRTLLEDSGMT---- 435 Query: 508 DDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567 LP Q R LLG A Q + + Sbjct: 436 --------LPEVLQTVQA----RELLGRAFPKIQ---------------------AFSDM 462 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 + +L + L + +E+ L L A L ++ + ++ I E Sbjct: 463 IQELARVKDTLPVKDLMEQVLEK-SGYLEALRLEGSDQSKSRLDNLNEFLRIADEFAKDP 521 Query: 628 YGDA-VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 + L + +A D + + V + TL + + F VV + GM DG++P Sbjct: 522 GEENNKTLEDFLNHVALVADIDD--AKLTQDSVTLMTLHSAKGLEFPVVFIGGMEDGLFP 579 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FP 744 Q + D + ++ R L + A+++LY++ + P Sbjct: 580 SQRSLEDEDKLEEE------------RRLCYVGITRAKKRLYLTNCRSRMVYGHVVMYPP 627 Query: 745 SVLVQELIDYI 755 S ++E+ + Sbjct: 628 SRFLEEIPRNL 638 >UniRef50_UPI000051001F putative ATP-dependent DNA helicase II n=1 Tax=Brevibacterium linens BL2 RepID=UPI000051001F Length = 850 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 67/474 (14%), Positives = 143/474 (30%), Gaps = 81/474 (17%) Query: 322 ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHS 381 E + LL + + A A ++ + + + +I V + Sbjct: 289 EFEKDFPNAETILLEQNYRSTQNILDAANAVISNNQDRKDKKLWTSEGTGETIVGWVAEN 348 Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAIS 440 Q E + DR + L ++ T D V Y Q+ A +PY + Sbjct: 349 EQAEARFIVDR-VDELIDNEKYTYGDFAV------FYRTNAQSRAIEDALVRSGIPYKVV 401 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 ++ ++ L + + ++ +L+VP + I + + + + Sbjct: 402 GGTRFYERKEIKDALAYLRVVANPDDDVNLRRILNVP----KRSIGDRTEGIVADFADRE 457 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 GI + +T L ++ A L D ++ A Sbjct: 458 GISF-----------------YTALGRLDEIVHLSARAKTSVAKFYDLMRDLAATAEAAP 500 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEE--WLPVCRDML---NAFFLP-------------- 601 + + +++ + + L + ++ + +++ F Sbjct: 501 LSRVIEAILEQSGYLESLQKSTDPQDESRVDNLAELVAVAEDFVATRALADATDDEDADD 560 Query: 602 ------------------DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 AE A + EG A + +++A Sbjct: 561 ADAEAAETGSSTAVDEGSSAEDGDAGDSTDDAGADAADEGRDAPSAGGSSIEAFLEQVAL 620 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 D ++I L G V + TL + + F VV L G+ DG +P + Sbjct: 621 ASDTDQIPDAEL-GQVTLMTLHTAKGLEFPVVFLTGLEDGGFPHARSFEN---------- 669 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYI 755 S ++R L L A+Q+L ++ + PS + E+ + + Sbjct: 670 --PSELSEERRLAYVGLTRARQRLIVTRAETRSMWGQPQYNPPSRFLSEIPESL 721 >UniRef50_A9WKU6 DNA helicase II n=2 Tax=Bacteria RepID=A9WKU6_RENSM Length = 797 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 52/424 (12%), Positives = 114/424 (26%), Gaps = 77/424 (18%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPADRYL 435 +V + E + + + L+++ P D+ + Y Q+ L Sbjct: 353 YVAENEHEEARFIAEEI-DRLQDEADFRPGDVAI------FYRTNAQSRSIEEILMRVGL 405 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY + ++ ++ L + + ++ +L+ P + I Sbjct: 406 PYRVVGGTRFYERKEIKDALAYLRVLVNPEDDVNLRRILNEP----KRGIG--------- 452 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 D L + ++ L + Sbjct: 453 -----------DRAEGAVAALAERERSSFMAALR----------------HAEDAPAIAT 485 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 V L+ L LE L L + + + Sbjct: 486 RSLNAVNGFVKLIDDLTEVASTSGAATALEAVLEQ-TGYLETLRASSDPQDESRVENLAE 544 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP------------VNICT 663 A++ E + L+ + +A D ++I + V + T Sbjct: 545 LVAVVREYERDKPEG--SLTDFLEGVALVADADQIPDAPGSDTEAAVAEARRLGVVTLMT 602 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISA 723 L + + F V L GM G++P+ + D ++R L L A Sbjct: 603 LHTAKGLEFPAVFLTGMEHGIFPQARSAT------------DAKELAEERRLAYVGLTRA 650 Query: 724 QQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 +++LY++ + S + E+ + + A+ S + + Sbjct: 651 RKRLYLTRAEVRSLWGQSQYNPASPFIDEVPANLIEWKREGMSRAIPSIGSSGFGRDRYS 710 Query: 782 CLHT 785 H Sbjct: 711 GSHW 714 >UniRef50_B1GYW6 ATP-dependent UvrD family DNA helicase PcrA n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYW6_UNCTG Length = 772 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 71/488 (14%), Positives = 147/488 (30%), Gaps = 79/488 (16%) Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VF 426 +P + S+T + E + L+ D D V Y Q+ F Sbjct: 314 NPDNGSVTVLKAVNENDEAVKIA-ELIYSNAYDNKCKFSDYAV------FYRTNAQSRTF 366 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 +PYAI ++ I+ L L + + ++++P R I Sbjct: 367 EDTFRLSRIPYAIVGTLRFYDRAEIKDVIAYLKLIYNPNDNVSFKRVINIP----RRGIG 422 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + + L +A WQS Sbjct: 423 KTSIETLEN---------------------------------------FAQLKNMSIWQS 443 Query: 547 VLPYDESSGLI---AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 V P+ + +GL AE + A + + + + + + E + + L +A Sbjct: 444 V-PFAQEAGLTKGPAEALNSFAQFIKDFSTLKNSGSV-KLIVEKVITDSEYLKEL---EA 498 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 E + + Q +I+ + ++ SL L + S G V + T Sbjct: 499 ENTPESKIKIENIQELISAVDDFEKNRSLDKSLAGYLTQIALMNDADSPDESKGKVTLMT 558 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISA 723 L + + F V + G+ +G++P + +++R L + A Sbjct: 559 LHLAKGLEFDNVFICGLEEGLFPMGESAFND------------KELEEERRLMYVGMTRA 606 Query: 724 QQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 ++ LY+ + PS + E ++ + T Sbjct: 607 RKCLYLCWSTERKVYGKIIWNMPSRFIAE--AGFKDESAEMEQNRKQNFQNRLSQGFNRT 664 Query: 782 CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT----LPETVPLETL 837 +H+ QN++ ++S+ E + + + S + E + + Sbjct: 665 IIHSDSFGREQNFRSFNKKSFKAEIVYTNAGSYGYMSSGGEITKAERFDNPAEDLSPYKI 724 Query: 838 QRFWAHPV 845 +HPV Sbjct: 725 GTAVSHPV 732 >UniRef50_A5UVF1 ATP-dependent DNA helicase, Rep family n=6 Tax=Chloroflexi (class) RepID=A5UVF1_ROSS1 Length = 659 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 56/383 (14%), Positives = 120/383 (31%), Gaps = 73/383 (19%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + + E E + + +L + P++I V+ S + F SA Sbjct: 337 LQIVDAKDARDEAERVARSIADLLRQ--GRRPQEIAVLYR-----SRHMSRAFESALRHA 389 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PYA+ V+ ++ L + ++ + + + +VP + L L Sbjct: 390 RIPYALRGATGFFDRAVVRDALAYLRVINNPADTLSLNRIANVPP----RGLGANSLVTL 445 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + + G + L A+ + E Sbjct: 446 SAFAGQRG-----------------------------LTLADALIHPEALALLPSKAAEG 476 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV--CRDMLNAFFLPDAETEAAMTL 611 + +A L+ L L+ + L + L + L P+ A Sbjct: 477 ARQLAALLTRWRRLAES------ALSPDHLLADVLERTGYQAWLEQRLEPEN-VPDARAH 529 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 +++ A + V L L D + V + T+ + + Sbjct: 530 LQELANAAADHTALNAFLQEVAL------LTSADDNDEER-----DRVQLSTIHAAKGLE 578 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 + +V ++G+ +GV P + + D++R L AL A ++LY+S+ Sbjct: 579 WPIVFVVGLEEGVLPHEHS------------LVTPEGVDEERRLCYVALTRAGEQLYLSW 626 Query: 732 IGRSIQDNSERFPSVLVQELIDY 754 ++ PS + ++ Y Sbjct: 627 AASRVR-GKLAKPSRFLNDIEAY 648 >UniRef50_C1ZAM6 DNA/RNA helicase, superfamily I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZAM6_PLALI Length = 845 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 68/488 (13%), Positives = 145/488 (29%), Gaps = 75/488 (15%) Query: 337 NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS---ITFHVCHSPQREVEVLHDRL 393 ++ + A ++ + + L + S + +E + L + Sbjct: 278 RLEDNFRSTPEILAAADDLIRHNTQRKAKSLRTSNPSGLPVEIRQYADGFQEADSLAAEI 337 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 + D + ++S S I+ G A +P+AI+ A ++ Sbjct: 338 RERVASGE-RQYSDFAIFYR-VNSLSRSIETALGRA----RVPFAITGGVAFYERTEVKD 391 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 I+ L + ++ +++ PV I + L +W + + Sbjct: 392 LIAYLRVIENPDDRPAFRRIVNTPV----RGIGKNSQEKLDRWASARNL----------- 436 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 W +V D S GL + L L+ Sbjct: 437 ----------------------------NLWDAVHQIDASIGLPKKAEYSLKLFANLLDE 468 Query: 574 WRRGLAQERPLEEWLPVC---RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 R + E L V L + E A ++ A + Sbjct: 469 LARRSHGP--IAELLEVIVERTGYLQNLSGLEPEEYANRKANVEELVASARQFDQDHVEG 526 Query: 631 AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 LS + L Q+ + AG V + TL + + F V L+G+ G+ P Sbjct: 527 G-SLSEFLETC--SLVQDADTIDESAGQVQLMTLHSAKGLEFPCVYLVGVEHGLLPH--- 580 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLV 748 + + GD + +++R L + A+++LY+++ S + Sbjct: 581 -------ERSLREGDPLQIEEERRLLFVGMTRAREELYLTWTRLRSTHGRLLSTIASQFL 633 Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP 808 EL H D+ + + + T + + + ++S Sbjct: 634 TELN---VARHDYSTDDDTSFGDWSPQEMRRGTSGDSILAQMADWGEQARKESSNPSDKA 690 Query: 809 AASQAGKA 816 +++ +A Sbjct: 691 TSTEDDQA 698 >UniRef50_B2UQR8 UvrD/REP helicase n=2 Tax=Verrucomicrobiaceae RepID=B2UQR8_AKKM8 Length = 668 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 59/471 (12%), Positives = 136/471 (28%), Gaps = 81/471 (17%) Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSI 374 + + + E + F L + + A A + R R ++ Sbjct: 253 AQISNILEFERFFPNPSVIKLEENYRCTAPILDTANALIRHNLGRRDKTLRAHKGGGEAV 312 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 E E + + + D ++ + + + Sbjct: 313 RLISMPGDAEEAEFIITDI-ENVRRQEGRPWEDFAILFR-----ANTQSRIIEQTLREHK 366 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +PY + ++ ++ IS L+ ++ E +L +L+ P I+E + Sbjct: 367 IPYRMVGAQSFFDRKEVKDLISYLATIENPQADEYLLRILNTPP----RGISELTSHLVI 422 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 W E G W ++ + + Sbjct: 423 DWSREHG---------------------------------------NSVWAALQDEEFLA 443 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERP-----LEEWLPV--CRDMLNAFFLPDAETEA 607 L + + + + + LE+ + + + +AE + Sbjct: 444 ALSTRARNSVQAFNELIAKYIDLFQDKETDFGDILEQLIEETGFSEYVTRLCKTEAEIQK 503 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL--DQERISQRFLAGPVNICTLM 665 + I ++ P LRD LAQ ++ V + T+ Sbjct: 504 RLVSIGDVKASLRNFWQ--------PGKTLRDYLAQVTLDKEDNDDDVENKPGVCLITMH 555 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + F VV L+G+ +G+ P + + + D++R L + AQ+ Sbjct: 556 AAKGLEFPVVYLVGLEEGILPHKRSLEDGN-------------CDEERRLLYVGITRAQE 602 Query: 726 KLYISYIGRSIQDNSERFP--SVLVQELIDYIGQSHYLPGDEALNCDESEA 774 KL ++Y ++ S + E+ ++ + + E E+ Sbjct: 603 KLMLTYCATRLRYGDRMPCQRSSFLSEIPPHLMEYYKWEDLMNAEATEEES 653 >UniRef50_A7NGD4 UvrD/REP helicase n=11 Tax=Chloroflexi RepID=A7NGD4_ROSCS Length = 759 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 62/426 (14%), Positives = 117/426 (27%), Gaps = 58/426 (13%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 + + E +++ + ++ P DI +M Y Q+ A Sbjct: 322 VQVIEGYDQDEEAQLVAGEIARLIA-GGAYQPGDIAIM------YRTNAQSRAIEEALIA 374 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 R PY I ++ ++ L L + F + +L+ P I + Sbjct: 375 RQAPYIIVGGTRFYERKEIKDALAYLRLALNPFDDISLSRVLNWPA----RGIGQRTQED 430 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L + + + L ML A + Q+ P Sbjct: 431 LERRAGAAAV------------------------PLYVMLHTLAANAEAAADQTTSPAPA 466 Query: 553 SSG-LIAELVGHLASLLMQLNIWRRGLAQER--PLEEWLPVCRDMLNAFFLPDAETEAAM 609 +G + + L L ++ L +WL A + E Sbjct: 467 RTGEMPSRARNALLGFLTLIDESLDRRQTLSLGALMDWLFERVGFREALRREYGDEEGDD 526 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + + L L + + + V TL + Sbjct: 527 R--WNNVMELRN-VAEQYADLPLASQLSTFLEEVALVSDIDTLQEERNAVTCITLHQAKG 583 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F VV L+G+ +G+ P + DR D++R LF A+++LY+ Sbjct: 584 LEFPVVFLVGLEEGLLPHARSAD------------DRDALDEERRLFYVGATRAKERLYL 631 Query: 730 SYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH--T 785 + R PS + ++ + Q G A A + Sbjct: 632 LHAFRRATYGRTEIATPSRFLHDIPPDLLQRAPKRGYAAAQMVTGRAAALRNPRRNQAAP 691 Query: 786 RMPFDP 791 P Sbjct: 692 VSPHSA 697 >UniRef50_B8FBU8 UvrD/REP helicase n=2 Tax=Bacteria RepID=B8FBU8_DESAA Length = 1156 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 106/355 (29%), Gaps = 73/355 (20%) Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 + D V+ P +A +PY + D++ HP +E +S + L Sbjct: 848 EDWSFGDFAVLFRTRIQLPPLTEA-----LDRSGIPYQVVDKKRLVDHPGVEELLSYIRL 902 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 + D+L +++ P + I ++ + LR W + Sbjct: 903 INQTGTDLDLLRIMNFP----KRGIGDKTIETLRTW--------------------GESQ 938 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 + L LP S + + + + L Sbjct: 939 GKSLIEALE--------------VARRLPLPGLSNSQQIKLHSVWKTITEARKKILDLPL 984 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 LE + L + A I Q L D Sbjct: 985 PEALEHLMYTIP--LEPLYTRSGNGRTASACILDMAQDFDG-----------DLGRFCDM 1031 Query: 641 LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 + L + + A V++ T+ + + F+ V + G DG+ P Sbjct: 1032 VN--LASDADTLEPEADRVSLMTMHAAKGLEFRGVFVTGCEDGLIP-------------Y 1076 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELID 753 + G S +++ LF AL AQ++L+++Y R + PS + + + Sbjct: 1077 FREGKESDPEEELRLFYVALTRAQRRLWLTYAKRRRMFGKVISQQPSPFLTRIKE 1131 >UniRef50_D1VUE5 ATP-dependent DNA helicase PcrA n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUE5_9FIRM Length = 720 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 52/404 (12%), Positives = 132/404 (32%), Gaps = 76/404 (18%) Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPADRYLPYAISDRRARQ 446 + +++L + + D+ ++ Y Q+ F + + + Y I Sbjct: 329 AVTNKILGL--NYKGYSFEDMAIL------YRTNAQSRGFEESLSREGINYKIVGGLRFY 380 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 ++ ++ L + ++ +L +++ P + I + + +R + + + Sbjct: 381 DRAEVKDIMAYLKVINNPLDEIALLRIINKP----KRGIGDSSVEKIRDYAINNNL---- 432 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 S +++ Y++ + + + A+ Sbjct: 433 --------------------------------SMFEVIKNIENYEDLNVRAKKNIKSFAN 460 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA-MTLIEQQWQAIIAEGLG 625 L+ L R+ L L E + + + ++ I++ I Sbjct: 461 LINLLIE-RKDLLNVGELAELVVDESQYVEDLKNQNTLEARTKISNIDELISNI------ 513 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 Y LS ++ D ++ S A VN+ T+ + + FK+V L+GM +G++ Sbjct: 514 MSYDKETSLSDYLSNMSLLTDIDKTSD---AKGVNLMTVHAAKGLEFKIVFLVGMEEGLF 570 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERF 743 P ++ + +++R L A+ A+ L+IS + Sbjct: 571 PII-------------RQDEDEDIEEERRLCYVAITRAEDLLFISSSKTRYLYGKMTPKI 617 Query: 744 PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 S + E+ D I ++ + ++ +T Sbjct: 618 KSRFINEMQDTIE-IVEEKNQRLIDVIDYSGKIDERITTYKKVQ 660 >UniRef50_P03018 DNA helicase II n=409 Tax=cellular organisms RepID=UVRD_ECOLI Length = 720 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 66/467 (14%), Positives = 141/467 (30%), Gaps = 83/467 (17%) Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 G + L+D ++ + + + + + + ++E N + + + + Sbjct: 258 GAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEP 317 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 I+ + + E + +R+ +D + ++ Y Q Sbjct: 318 ----------ISLYCAFNELDEARFVVNRIKTW--QDNGGALAECAIL------YRSNAQ 359 Query: 424 A-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 + V A +PY I ++ +S L L +R +++ P Sbjct: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP----T 415 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 I + L +RQ Q T +L A+ Sbjct: 416 RGIGDRTLDVVRQ--------------------TSRDRQLTLWQACRELLQEKAL----- 450 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL----AQERPLEEWLPVCRDMLNAF 598 +G A + L+ L + +R +++ R M Sbjct: 451 -----------AGRAASALQRFMELIDALAQETADMPLHVQTDRVIKD--SGLRTMYEQ- 496 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 + + + +E+ A + D +PL L+ Sbjct: 497 -EKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH--AALEAGEGQADTWQDA 553 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 V + TL + + F V ++GM +G++P Q++ + R +++R L Sbjct: 554 VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMS------------LDEGGRLEEERRLAYV 601 Query: 719 ALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPG 763 + A QKL ++Y E PS + EL + + L Sbjct: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRA 648 >UniRef50_P44804 ATP-dependent DNA helicase rep n=275 Tax=Proteobacteria RepID=REP_HAEIN Length = 670 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 49/388 (12%), Positives = 115/388 (29%), Gaps = 71/388 (18%) Query: 374 ITFHVCHSPQREVE-VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 + + + E E ++ + + +D ++ + Sbjct: 312 LLVIEAKNEEHEAERIVAELIAHRFSRKT--KYKDYAILYR-----GNHQSRLLEKVLMQ 364 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY IS + S ++ ++ L L ++ L +++ P + +I L+ Sbjct: 365 NRIPYKISGGTSFFSRAEIKDMMAYLRLVVNQDDDAAFLRIVNTP----KREIGTATLQK 420 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L + E I ++++ ++ Sbjct: 421 LGELAQEKHI---------------------------------------SLFEAIFEFEL 441 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM-----LNAFFLPDAETEA 607 + + L + + + P + + L + E Sbjct: 442 IQRITPKAYDSLQKFGRWIVELNDEIQRSEPERAVRSMLSAIHYEEYLYEYATSPKAAEM 501 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + + + G + + + L+ + L R ER + V + TL Sbjct: 502 QSKNVATLFDWVADMLKGDETNEPMNLNQVVTRLTLRDMLERGEDDDDSDQVQLMTLHAS 561 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F V L+GM +G+ P Q + ++ +++R L + AQ++L Sbjct: 562 KGLEFPYVYLIGMEEGILPHQTSIDEDNV-------------EEERRLAYVGITRAQKEL 608 Query: 728 YISYIGRSIQDNSERF--PSVLVQELID 753 S Q PS + EL + Sbjct: 609 TFSLCRERRQYGELVRPEPSRFLAELPN 636 >UniRef50_B9KCT9 ATP-dependent DNA helicase n=1 Tax=Campylobacter lari RM2100 RepID=B9KCT9_CAMLR Length = 687 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 49/410 (11%), Positives = 121/410 (29%), Gaps = 84/410 (20%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVE--VLHDRLLAMLEEDPTLTP 405 A IE + K + D + + ++E + + +L + + P Sbjct: 290 LQAANELIEHNRKRLGKTLICTKDEGEEITILQNDDEKIESFKVAREVSKLL--NSGINP 347 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS-- 463 +I ++ +++ S ++ F +P+ + ++ IS L L + Sbjct: 348 SEIAILYR-VNALSRALEEAFS----KEKIPFKLLSGIRFYERAEIKDIISYLRLLSNLN 402 Query: 464 -RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + + ++ + + L L Sbjct: 403 DDYSFKRIIN-------RPKRNFGNASLEKLEN--------------------------- 428 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 YA E+ ++S+ S + L ++ ++ + Sbjct: 429 ------------YAKENHLSLFESLCALQGSGFFSKKTDKELEKFILSMHKIKEKDDLLA 476 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 + + + F+ + E E + I++ + + + Y D++ Sbjct: 477 MILALEEEFK--IKEFYKDNPEGEDKLLNIDELYANLKDKISHGNYNG-------LDDIL 527 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 + + I ++ + + F V ++G+ +G +P Sbjct: 528 NEISLLNEQDGLDKESICIMSIHASKGLEFDYVFIIGLEEGFFPLTSES----------- 576 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQE 750 S +++R L A+ A++KLY+SY S S E Sbjct: 577 ----SNIEEERRLAYVAITRAKKKLYLSYANSRFYKGSRTRLEKSRFFGE 622 >UniRef50_C8WTI7 ATP-dependent DNA helicase PcrA n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTI7_ALIAD Length = 756 Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 66/386 (17%), Positives = 123/386 (31%), Gaps = 69/386 (17%) Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADR 433 V + E + + D + M+ RD+ ++ Y Q+ V A R Sbjct: 324 KLFVAPDERVEADWVADEIARMVAN--GREYRDVAIL------YRTNAQSRVLEEAFLQR 375 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY I ++ I+ L L + L +++VP + I + L L Sbjct: 376 GIPYRIYGGLRFYERREVKDVIAYLRLIANPNDDVSFLRVVNVP----KRGIGDTTLEKL 431 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 ++ G L H G Sbjct: 432 AEYARHRG------------TSLFEAALHALEAG-------------------------I 454 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV--CRDMLNAFFLPDAETE-AAMT 610 S A + L+ L + R L +E L R+ L A +AE + Sbjct: 455 SKKAASALQSFVELIQTLQLQRAFLPLTDLTDELLDRSGYREALRAERSLEAENRLENLD 514 Query: 611 LIEQQWQAIIAEGLGAQYGDAVP--LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + +G+ A+ L+ + L R +R V++ TL + Sbjct: 515 EFLSLTREFDEDGVPDGEMGALEQFLTHVALVSDADLPGGRPGRREDLDEVSMMTLHAAK 574 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F VV L+G+ +GV+P + A G + + ++ + + A ++LY Sbjct: 575 GLEFPVVFLVGLEEGVFPHRRALDGGEELEEERRL------------CYVGITRAMERLY 622 Query: 729 ISYIGRSIQDNSERF--PSVLVQELI 752 ++ + R PS + E+ Sbjct: 623 LTTCRSRMLFGERRSFTPSRFLSEMP 648 >UniRef50_C7HU69 ATP-dependent DNA helicase PcrA n=2 Tax=Anaerococcus RepID=C7HU69_9FIRM Length = 729 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 61/416 (14%), Positives = 136/416 (32%), Gaps = 70/416 (16%) Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQ-REVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 R + D S + S + E + + D + ++L + +D+ ++ Sbjct: 297 NSERKEKNLWTSKNDGSEVLYKKSSVESEEGKFVIDEINSLL--NDGYRLKDMAIL---- 350 Query: 416 DSYSPFIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 Y Q+ +F L Y + ++ IS L + + + ++ Sbjct: 351 --YRMNAQSRIFEEYLMKNLLDYKVVGGLKFYDRKEIKDLISYLKILVNPKDDISLKRII 408 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + P + I ++ + L + N+ G ++ EL + L Sbjct: 409 NEP----KKGIGDKTVEKLEKEANKLGF-------SLTELVCDPSLFSNLPSKLKSSCEK 457 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 + A+ + + YD L ++ + + R L + +E + D Sbjct: 458 FYNPLAE-IFDNYKDYDIVE---------LIEEILDKSGYIRALEESYSVENRSRI--DN 505 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 LN F AE ++ E + L LD+ Sbjct: 506 LNEFISSAAEYQS--NNPEDNIHDYLENLS----------------LLSDLDKTEDK--- 544 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 +++ T+ + + FKV ++GM++G++P + + ++ +++R Sbjct: 545 -DDSISLMTIHSAKGLEFKVCFVVGMDEGLFPSKRSIDEGNI-------------EEERR 590 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALN 768 + A+ A +KLY+S Q + PS + E+ I + Sbjct: 591 ICYVAITRAMEKLYLSSAEIRRQFGQPVYYKPSRFLNEVESSIKKIDQDKTPAYSP 646 >UniRef50_C7RHP9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7RHP9_ANAPD Length = 731 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 64/448 (14%), Positives = 146/448 (32%), Gaps = 75/448 (16%) Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQ-REVEVLHDRLLAMLEEDPTL 403 LE + N E + D + +S + E + + D + ++++ Sbjct: 287 LETANLLIENNSERKDKELWTENKGGDR--VIYKANSVESEEAKFVLDNIKSLMQ--EGY 342 Query: 404 TPRDIIVMVADIDSYSPFIQAV-FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 +D ++ Y Q+ F L Y + ++ +S L + Sbjct: 343 DAKDFAIL------YRTNAQSRPFEEILMKNLLDYKVVGGLKFYDRKEIKDLVSYLKILV 396 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + + +++ P + I + + L++ N I L+L Sbjct: 397 NPKDDLSLKRIINEP----KRGIGNKSIEELQRVANLHNI---------AILDLITDDSF 443 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDES-SGLIAELVGHLASLLMQLNIWRRGLAQE 581 ++ +S + + LP E + + L ++ + + + L Sbjct: 444 ------NTLISDRIKKSTEKFY---LPLREIFDNVDNYKIVDLIEDVLDKSGYMKSLESS 494 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 +E+ + D +N F +E + E + L Sbjct: 495 YSVEDRARI--DNINEFISSASEYQE--NNPEDNIYDYLENLS----------------L 534 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 LD+ + +++ T+ + + F VV ++G+++G++P + + ++ Sbjct: 535 LSDLDKTESTD----NSISLMTMHAAKGLEFPVVFVVGLDEGLFPGKRSIDEGNI----- 585 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSH 759 +++R LF A+ AQ+KL++S PS + E+ID I Sbjct: 586 --------EEERRLFYVAITRAQEKLFLSSAEARRNYGKPVFYKPSRFIDEIIDNIKVEE 637 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRM 787 + + E E + TR Sbjct: 638 KI-SSYGYSSREYEKTMAEDYMREKTRQ 664 >UniRef50_A0Q2Q4 ATP-dependent DNA helicase PcrA, putative n=23 Tax=Clostridium RepID=A0Q2Q4_CLONN Length = 760 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 54/431 (12%), Positives = 133/431 (30%), Gaps = 70/431 (16%) Query: 339 QSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 +++IL N + + ++ R + I + +S E + + + +++ Sbjct: 285 KANILNAANTVIKHNSQ---RKNKVLRTQNENGEKIKIYRAYSDMDEGLFISNEIKRLIK 341 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 + + +D ++ Y Q+ VF R +PY I ++ + Sbjct: 342 K-ENRSYKDFAIL------YRTNAQSRVFEDVFMKRDIPYRIIGGLKFYDRKEIKDITAY 394 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L ++ + +++VP + I + ++ + N Sbjct: 395 LKFINNLQDDISLKRIINVP----KRAIGAATVSKIQDFAN------------------- 431 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 Y E V S + SL+ + Sbjct: 432 -----------------YMDECMYSVLLDVENIPGLSKRSISSINKFTSLINGFTRTKDK 474 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 ++ ++E L M + E + + I++ A + + LS Sbjct: 475 VSVSNLIQEILESTGYMKELKDSNEIEDISRIENIKELVSAAVE---FENTSEDKSLSAF 531 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 +++ D + + + TL + + F VV ++GM +G++P + F Sbjct: 532 LEKITLVSDVDNYDE--DTDTTVMMTLHSAKGLEFPVVFMVGMENGIFPGAQSLENF--- 586 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYI 755 + ++ R L + A+++LY++ S + E+ + Sbjct: 587 ---------AEMEESRRLCYVGITRAKEQLYMTSASTRKVFGRSVAYSESDFINEISPNL 637 Query: 756 GQSHYLPGDEA 766 + E+ Sbjct: 638 KEMVREGRTES 648 >UniRef50_A0M3U3 PcrA-like UvrD/Rep family ATP-dependent DNA helicase n=28 Tax=Bacteroidetes RepID=A0M3U3_GRAFK Length = 787 Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats. Identities = 51/427 (11%), Positives = 124/427 (29%), Gaps = 75/427 (17%) Query: 407 DIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 D ++ Y Q+ A + +PY I + ++ ++ L L + Sbjct: 369 DFAIL------YRTNAQSRAMEDALRKKDIPYRIYGGLSFYQRKEIKDVLAYLRLILNPK 422 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 E + +++ P I + + L N+ I Sbjct: 423 DEEALKRVINYP----SRGIGQTTMDRLAIAANQHKI----------------------- 455 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE-LVGHLASLLMQLNIWR------RGL 578 ++ + D+ I L + + + + Sbjct: 456 ----------------SMFEVIKNIDKLELKINRGTQTKLVNFVNMIRSFAIMNETSDAF 499 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 + + + +++ + + + + EG LS Sbjct: 500 QIAETVTKKTGLVQELKKDGTPEGIARIENIEELLNGMRDFV-EGQKELADATGSLSEFL 558 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 + L + + V + T+ + + F V ++GM + ++P ++ Sbjct: 559 E--DVALATDLDNDTGDDDRVALMTIHLAKGLEFPYVYIVGMEEDLFPSGMS-------- 608 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIG 756 RS +++R LF A+ A+++ Y++Y + + PS ++E+ D Sbjct: 609 ----MNTRSELEEERRLFYVAITRAEKQAYLTYTLSRYRWGKLVDAEPSRFIEEIDDQYL 664 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 P D+ + + P++ P + E L + A Sbjct: 665 DLMV-PQDDYKYKPLIDTDIFGDAVDKSKLRQTKPKSGTPPPAHKPSEEQLRKLRKLKPA 723 Query: 817 HSEFVQP 823 +E + Sbjct: 724 ATEPSKA 730 >UniRef50_C6HUX3 Putative ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUX3_9BACT Length = 796 Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats. Identities = 64/464 (13%), Positives = 124/464 (26%), Gaps = 67/464 (14%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + + E + L + P V+ P A A Sbjct: 329 VLLMEFPDEEAEARGVAGILREWIA--GGGRPSRAAVLFRTNAQSLPL-----EKAMAAA 381 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P+ ++ L L + F + + +VP +E + L Sbjct: 382 GVPFFRPGGGGLLESREARDLVAYLRLLVNPFDRLSLARIFNVPP----RGQGDEAVEEL 437 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 ELP L R+ Sbjct: 438 SALSEAH-------------PELPVAEL------LERLAE-------------------- 458 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 G E +G L++LL + + L + + V + + + E +E Sbjct: 459 RGGRREPLGKLSALLREGSEAASRGDVPLSLLDRV-VAATGYREWLTREKDEETRRRRLE 517 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + G + D L L V + T+ + + F Sbjct: 518 TLEEFRGLAGDFVREEDREASGPLAAFLEDLTLSREGPDAEGRERVGLMTIHQSKGLEFD 577 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 V + G+ D + P + G + +++R LF A+ A+++L++++ Sbjct: 578 CVVVAGLEDQLLPFRSFAGGRS----------STDIEEERRLFYVAMTRARERLHLTWAR 627 Query: 734 RSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 + PS ++++ + A + S R+ F P Sbjct: 628 TRRIYGKTQSFGPSPFLRDIPGELSAGDRPVFVRAPSAPSSSGRLPGQ--SRDGGSGFSP 685 Query: 792 QNYQPGERQSYARE--WLPAASQAGKAHSEFVQPLPFTLPETVP 833 P R A P A K +P P P ++ Sbjct: 686 SFGHPSRRDRLASPSVGRPVFRGASKVERRQGEPSPAEGPASIS 729 >UniRef50_A9KP66 UvrD/REP helicase n=12 Tax=Bacteria RepID=A9KP66_CLOPH Length = 807 Score = 108 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 85/640 (13%), Positives = 182/640 (28%), Gaps = 113/640 (17%) Query: 209 SRVFICGISA-----LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTR 263 RVF+ IS+ + P + L ALG + ++ + +N + Y +K L Sbjct: 136 ERVFLSAISSAKDEGISPEEFE-LSALGDYNKMKI--SNVYKEYQRRLKTNNALDFDDLI 192 Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN------PLLASWGKLGRDYIYLLSDL 317 + N + D QD LLA + L++ Sbjct: 193 MKTVELFQSNTEALNYYRNRFRYIMVDEYQDTNTIQFKLIRLLA----------HSLNEY 242 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILE---------------LENRAVAGVNIEEFSRSD 362 + V ++ ++I LE + NI + Sbjct: 243 NEVEHNLCVVGDDDQSIYKFRGANIRNILDFEKEFPDAVVIKLEQNYRSTKNILNAANEV 302 Query: 363 NKRPLDPLDSSI--------TFHVCH--SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 L D S+ C + E + D + L + ++ + ++ Sbjct: 303 IHNNLGRKDKSLWTDNEDGEQVSFCQYDTDFAEATQVVDSI-KTLNDQDGISFNNFAIL- 360 Query: 413 ADIDSYSPFIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 Y Q+ VF R +PY I ++ ++ L D+ V Sbjct: 361 -----YRTNAQSRVFEEKMIQRSVPYKIIGSINFYQRKEIKDLLAYLKTIDNGLDGIAVK 415 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +++VP + I L + ++ ++ + D +P Sbjct: 416 RIINVP----KRGIGLTTLDRVEEFSVKNNM--SFYDALRHAENIPG------------- 456 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 LG + + + L +++ + + L + Sbjct: 457 -LGRSTSKITSFVSFIETIKSKLSSDTFTLKDLMEEILEGTGYLKELEEA---------- 505 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 D E + I + I+ + + LS +E+A D + S Sbjct: 506 ---------DDESAEDRIGNINELINKIVTY--EVEATEPPTLSGFLEEVALVADID--S 552 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 + V + TL + + F V L GM DG++P ++ + + + Sbjct: 553 LEEDSNHVVLMTLHSAKGLEFPYVYLCGMEDGIFPSYMSINAENPELEIEEERRL----- 607 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNC 769 + A +++++S + + + PS + E+ Y+ L Sbjct: 608 ----CYVGITRAMKQIHLSAARQRMMRGETQFNRPSRFINEIPRYLLTIQSAQNKGYLAK 663 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 D + + + + + + Sbjct: 664 DSYGESPIRNASPNFSTQ--SRGMFDSDNPFDKSSSYNDT 701 >UniRef50_A1BEA2 ATP-dependent DNA helicase PcrA n=2 Tax=Chlorobium RepID=A1BEA2_CHLPD Length = 734 Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 57/382 (14%), Positives = 119/382 (31%), Gaps = 71/382 (18%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 +T + + E E + + + + + R V Y Q+ V Sbjct: 318 LTLIEARNERHEAEKIGEYI-HSIRIEKGYEFRSFAV------FYRTNAQSRVLEDLMRQ 370 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY I + ++ ++ L + SE +L +++ P I E + Sbjct: 371 NRIPYKIFGSVSFYKRKEIKDAVAYLRFLLNDRDSESLLRIINFPP----RKIGETSIGK 426 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 LR++ GI T +TR + Sbjct: 427 LREFAEAEGI--------------------TLYEAITR--------------------AD 446 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 + LV L L R LA+ + L + + L E A Sbjct: 447 EGQFQSRLVNSLKGF-SSLIEALRLLAETGTVYAVLTELFSLTSIPLLLKEENTAESLAR 505 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP-VNICTLMPMRSIP 671 + Q ++ + L D L + + V++ T+ + + Sbjct: 506 HENLQELL-SMARDFSDNNPDQGSLGDFLETISLASNYDESQDSDNYVSLMTVHASKGLE 564 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F VV + G+ + ++P + + +++R LF A+ AQ+K+++S+ Sbjct: 565 FPVVFITGLEERLFPLN--------------CYEPEQLEEERRLFYVAMTRAQEKIFLSW 610 Query: 732 IGRSIQDNSERFP--SVLVQEL 751 ++ S+ + E+ Sbjct: 611 AQTRYLYGQPQYCLKSMFISEI 632 >UniRef50_Q31JE9 ATP-dependent DNA helicase UvrD n=3 Tax=Gammaproteobacteria RepID=Q31JE9_THICR Length = 741 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 58/410 (14%), Positives = 130/410 (31%), Gaps = 56/410 (13%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 I + + E + +++ + E+ + ++ V+ Y Q+ V A Sbjct: 318 IRIYEAFNELDEARYVCNQVESWCEQGGSR--SEVAVL------YRSNAQSRVMEQALLQ 369 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY + ++ ++ L L + + + P I + Sbjct: 370 AQIPYRVYGGLRFYDRAEIKDVLAYLRLLVNTEDDAAFERVYNHPP----RGIGNKTADQ 425 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 +R E+ + + T+M A+ L E Sbjct: 426 IR--------------------EVARMQEISLWQAATQMAQDGLTARAKTAVNGFLSLIE 465 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE----WLPVCRDMLNAFFLPDA-ETEA 607 S + ++ ++ L E+ E L +++NA + + Sbjct: 466 SLKDSTAELTLQDQVIQVISRSGLQLHFEKDTSEQGQSRLENLDELINAVSVFKPVQDND 525 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + + + A+ + + L+ L+ V + TL Sbjct: 526 TVEGVVPEEAAMTEAFDQPNFENP--LAEFLA--QAALEAGEQQADQWESSVQLMTLHAA 581 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F +V ++G+ +G++P Q + D R +++R L + A+++L Sbjct: 582 KGLEFPLVFMIGLEEGLFPSQQSQE------------DPYRLEEERRLAYVGITRAEKQL 629 Query: 728 YISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 IS+ R SE PS ++E+ D Q L G + + Sbjct: 630 MISFANRRRMHGSEFYPLPSRFIKEIPDDCVQMVRLSGSVKHYGETASHA 679 >UniRef50_UPI0000E87DAA UvrD/REP helicase n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87DAA Length = 725 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 54/450 (12%), Positives = 128/450 (28%), Gaps = 80/450 (17%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 + I+E + E D R + LD E++ LH Sbjct: 299 NAIIENNADRLGKNLWSEAGDGDLIRQYNALDDR---FETSYILDEIKGLHR-------- 347 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 I ++ Y Q+ V A +PY + +++ ++ L Sbjct: 348 -SGSRYDQIAIL------YRNNAQSRVIEMAMVSNNIPYRVYGGLRFFERAEIKSSLAYL 400 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 L ++ L +++ P I + L ++ N Sbjct: 401 RLITNKKDDTAFLRIINFPP----RGIGAKALELIQDVANA------------------- 437 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY-DESSGLIAELVGHLASLLMQLNIWRRG 577 + + R+ + D+ G + + + + Sbjct: 438 -EKISLWQSAERIESENKNTKISFFVHLIRHIEDQIEGNNIDES---IDFINSYSTLKDH 493 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP-LSL 636 +++ + ++++ A +++ LS Sbjct: 494 YGKDKDGSSRIENLDELVS-----------AAKAYINEFRE--ENTENESGDSKASILSD 540 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 D L+ + + + T+ + + F V + G+ +G+ P Sbjct: 541 FLDF--TSLESGELQASAGDDALQLMTIHSSKGLEFDTVFITGLEEGLCPH--------- 589 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDY 754 + + + +++R L A+ A+QKLY++ + PS + E+ + Sbjct: 590 ---ERSLSENNGLEEERRLMYVAVTRARQKLYLTLAQSRLTYGQTMYNLPSRFLDEIPNE 646 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLH 784 + + P + S A++ H H Sbjct: 647 LVKRINAPKK---SFAISTAKIATHSETKH 673 >UniRef50_A6GB18 ATP-dependent DNA helicase PcrA n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB18_9DELT Length = 845 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 58/381 (15%), Positives = 116/381 (30%), Gaps = 61/381 (16%) Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 H + E + + R+ + D +P +I V P A Sbjct: 368 ELHGFADERDEAQYVARRVRRAI--DEGESPGEIAVFYRTHAQSRPL-----EEAMRLAG 420 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 + Y + ++ I+ L L + D L +++VP I + L Sbjct: 421 VRYRMLGGIRFFDRREIKDLIAYLRLLTNPGSDLDCLRVINVPARR----IGARTIERLS 476 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 W I ++ +H GL R Sbjct: 477 A--------WAISKESSLYDACGPASKHGEEAGLGR------------------------ 504 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 + V L+ L L+ L + L +F L E Sbjct: 505 -AAVKAVKGFWELVEGLRDDSEELSHHETASLVLGR-TNYLESFAAEQDAETRTENLYE- 561 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 ++ + E Q V L+ ++++ + + + + + T+ + + F Sbjct: 562 -FRGALEEFGEEQPD--VSLAEYLEQISLAAGGDEAT---VDAAITLMTIHSAKGLEFDR 615 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V L GM + V+P + + R +++R L A+ A++ L +S++ R Sbjct: 616 VMLTGMEERVFPHVRSLDPEN-------PKGREALEEERRLAYVAISRARRWLSLSFVER 668 Query: 735 SIQDNSER--FPSVLVQELID 753 S + PS ++ L + Sbjct: 669 RFLWGSTQLNEPSRFLRALPE 689 >UniRef50_Q6MND7 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MND7_BDEBA Length = 672 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 49/381 (12%), Positives = 118/381 (30%), Gaps = 68/381 (17%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E E + +L + + +D+ V+ ++ I++ + +PY IS + Sbjct: 326 ECEFVVTEILNFQRQ--GYSYKDMAVLYRS-NTQGGLIES----SLRRANVPYHISGGTS 378 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 ++ ++ L + + +++VP I + + L ++ + I + Sbjct: 379 IFDRREIKDLMAYLKQALAPNEVS-LRRIINVP----SRGIGDTSIEKLSEFALKKRINF 433 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 A WQ + L Sbjct: 434 ---------------------------------VDACRFWQE----AGVQDKAGAAIDDL 456 Query: 565 ASLLMQL-NIWRRGLAQERPLEEWLPVCRDM-LNAFFLPDAETEAAMTLIEQQWQAIIAE 622 + L P + + + +D+ + A + + + Sbjct: 457 MMFIENLPKNILDFQVGSSPGAKMVQIFQDIGYREYVYGTAADPTSAEKKWMVVEILGRI 516 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + + ++ + L ++ +S+ L V + TL + + F VV L G+ + Sbjct: 517 LDSFLGRRSYDVENIKSFVDCMLLRDDLSEEELENKVQLMTLHASKGLEFPVVILAGLEE 576 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 + P + D ++R LF + A+++L +S + ++ + R Sbjct: 577 DLLPHKNLGSDID---------------EERRLFYVGVTRAKKRLVMSRCQQRKKNGAVR 621 Query: 743 F--PSVLVQELIDYIGQSHYL 761 PS + EL + L Sbjct: 622 PVAPSRFLLELPKELYTEFPL 642 >UniRef50_D1YBS2 UvrD/REP helicase n=2 Tax=Propionibacterium acnes RepID=D1YBS2_PROAC Length = 1071 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 96/685 (14%), Positives = 175/685 (25%), Gaps = 94/685 (13%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E + D L+ E D ++V + + R +P ++ Sbjct: 416 ECQACADILVEAKERGTIARWSDAAILVRRNSDVADLYDS-----LTARDVPVRFANLSG 470 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 P + ++ L L R + LL P R ++ + L Sbjct: 471 LLRLPDIAMVVAHLRLLVDRQDDAAMATLLAAP----RLGLSTDDL-------------- 512 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 V GL S + G L + Sbjct: 513 ----AMVYRRARALAKARAKDDGLD--------PDDVEIHLSDAVMEGRPGGHERLQCAV 560 Query: 565 ASLLMQLNIW-RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 + ++ L + +++ D AA I E Sbjct: 561 KRVCAEIVEVDAHQGDSPDDLVLRIEAITGLIDDIAADDPHRSAARRDHLDALWNAIREV 620 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLA---GPVNICTLMPMRSIPFKVVCLLGM 680 + + ++ + LA D R V + T+ + + + +V + M Sbjct: 621 RRS--DPTMTITGIVTWLAAEEDVGDGLPRAATDDRDAVTVSTVHGAKGLEWPLVIIPDM 678 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD--------------------------DRY 714 GV+P P F + R D + Sbjct: 679 AQGVFPSTSTPDNFASEAAVLPSFARGDASDISHPLSGSVVDTKAYVAALKEDSQWAEAR 738 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 L AL A+++L +S+ + P L D +G G+ N ++ Sbjct: 739 LAYVALTRAKERLVVSWHQWRPRRKGSLGPGRYADLLADMLGTVWPDFGERPDNVIQAGT 798 Query: 775 RVKAHLTCLHTRM-PFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP 833 H + PG+ W A + A LP + Sbjct: 799 PWPVFADVGHGLIDNASRSVDDPGQADRVRAWWTDADALLKDARRHIDLQDEVALPPRLT 858 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNA----LV 889 + R A+P + + R D I + ++Q+L A L Sbjct: 859 TSQIVRLHANPQAF------RDDLRRPMPRPADRGAGIGTAFHEW-VSQRLAPAEPIPLF 911 Query: 890 EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD-RVIACRQPGQSMEIDLACN 948 + ++ L + G Q + R + Sbjct: 912 DAEEVAELDEENTTQEAVAAEPSGA-ESRALRSLCQAFEESRWAGATVLAVEKSFVMTIG 970 Query: 949 GVQITGWLPQVQPDG-------LLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESR---- 997 + G L V D ++ W+ S A +QL + L + + G SR Sbjct: 971 QTVVRGRLDAVVADPDHPGDELVIDWKTSPPRSADPLQLSIYRLAWAQARGIDPSRVRAV 1030 Query: 998 -LFLRKDGEWRFPP-LAAEQALHYL 1020 + + P L A+Q L Sbjct: 1031 FHHVGANETISAEPLLDADQVAAIL 1055 >UniRef50_Q6XYV7 ATP-dependent DNA helicase n=2 Tax=Spiroplasma RepID=Q6XYV7_SPIKU Length = 729 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 67/439 (15%), Positives = 149/439 (33%), Gaps = 80/439 (18%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAG-VNIEEFSRSDNKRPLDPLDSSIT-------FH 377 F P Q+ +L R+ +++ NK ++ +I + Sbjct: 266 FDKYFPHT-----QTIVLNENYRSTQSILSLANNLIIHNKNRIEKNLFTIKASGQLPILY 320 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 + E + + ++ L ++ DI+++ + ++ +A AD + Y Sbjct: 321 HGANSSDESDFVARKI-KTLIKEENYDYNDILILYR-----ANYLSRDLETALADYGISY 374 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 I ++ ++ L + + D LA+ + +L + I + + Q + Sbjct: 375 RIFGAFKFYERKEIKDALAFLKIIMNN----DFLAIERILLLIPK--IGPKTFEQIMQIL 428 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 + I + + +L LP QH+ ++L A Sbjct: 429 KDQQIMFTTLLEQHFDL-LPLNLQHSLNKVREAIVLALA-----------------QLPT 470 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 + + L LL+ + + L E + Sbjct: 471 VKSIESLLVLLLDKTGYLQRLR-------------------------DNYEEEREENILE 505 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 I + G Q + + L E Q + + S +++ T+ + + KVV + Sbjct: 506 LIASIGKFDQQNKELAGTELLSEYLQLISLQTDSDNLTDNTISLMTIHNAKGLEKKVVFI 565 Query: 678 LGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI-GRSI 736 +G+N+G++P A + + +++R A+ +++ L+ISY G S Sbjct: 566 VGLNEGIFPTTQA-----------IKMGTEQLEEERRALYVAITRSEELLFISYADGYSY 614 Query: 737 QDNSERFPSVLVQELIDYI 755 +ERF S ++EL + Sbjct: 615 ITGNERFESRFIKELDNDF 633 >UniRef50_C7RA34 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RA34_KANKD Length = 913 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 99/692 (14%), Positives = 204/692 (29%), Gaps = 115/692 (16%) Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSE----------NAGQL 286 HLL ++ W DI + + L S + + + Sbjct: 77 HLLSDQQSQFIWQDIIERSDWNDFLLNINATSSKAWQAWQQYQQWQLDITQSLTWDKDTQ 136 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE 346 D + L S I LL +L S +L + I +L Sbjct: 137 AFKDWASEFVQRLEESHWIDSASSINLLLELMSQHQLPVADTIFTAGF-EQITPQQQKLF 195 Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQRE----VEVLHDRLLAMLEEDPT 402 +R +EE + S+ +S + E + D ++ L+++P Sbjct: 196 DRLRQTSKLEELASSNTTVTP-------QVLSFNSMREEFKTAIHQARDSVIKALKDNPD 248 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP--------YAISDRRARQSHPVLEAF 454 R ++V +++ + I+ + P Y IS + P++ Sbjct: 249 QPFR-CAIVVPELEKHKALIERLLWQELTPSLEPEQQPVVGIYDISLGESLNRQPLVVTA 307 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 ++LL + ++ + LL P + Sbjct: 308 LNLLKFLNGSIEAQVLQQLLLSPYFGKP-----------------------------KAS 338 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 + R L + L + + ++ + + A L+ L+ Sbjct: 339 GTGHDQLLSDRARLEKFL-----RKSHKQRFAISELSDLAQQAKITSSSFADLIESLSSA 393 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT-LIEQQWQAIIAEGL--GAQYGDA 631 ++ + + L +W+ +L+A P T + ++Q + Y + Sbjct: 394 QQLVKTKLTLADWVKRLTSILDAAEWPGMRTLQSREYQVQQTLYDCFNQLRQFQVFYPEV 453 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 + S L + L+Q + +++ Q P+ + L+ + F + L G V P Q P Sbjct: 454 ISFSSLLELLSQLIAEKQFHQELPKAPIQVMGLLETLGLEFDQLWLTGATYQVLPAQPNP 513 Query: 692 LGF---DLMSQKPKRGDRSRRDDDR-YLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 F + Q G ++R+ + +L+++ + +SY SE PS Sbjct: 514 NPFIDKQTLKQHQMPGSSAQREYEYAQQLFNSLLASGDDVTVSYPRFDGS--SELLPSPF 571 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 + E E A L + + Sbjct: 572 IAE------------------FPEQTIAANARLAPDFINQIVESSRREDSVESYQDTHGQ 613 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 P A+ K + F + P +A+ RL+V E + Sbjct: 614 PLATGVVKGGTGF----------------FRDQINCPFKAYMSYRLKVKEFEEVEQ---- 653 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAERLFR 899 L + R + +L A ++ D+ + Sbjct: 654 ---GLNAMERGSLVHTVLEAFWKEHDSNEILT 682 >UniRef50_A5FDD0 ATP-dependent DNA helicase, Rep family n=2 Tax=Flavobacteriaceae RepID=A5FDD0_FLAJ1 Length = 787 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 59/387 (15%), Positives = 125/387 (32%), Gaps = 77/387 (19%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + FH + E + + + +L+ + DI ++ S + A Sbjct: 322 VHFHG-KNDFEESQWIASEIKEILQAEQAA-YSDITILYR-----SNHLSRNIEQALIKD 374 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY+I ++ +SLL L L + + P Sbjct: 375 NIPYSIFGGIRFFERKEIKDVLSLLRLIVQGDNFS-FLRMHNHPA--------------- 418 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQH-TWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 G+ + L L A Q+ + L R + Sbjct: 419 ----------RGLGKKFLERLSLLAGEQNLSLLQALERNI-------------------- 448 Query: 553 SSGLIAELVGH-LASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETEAAM 609 EL L + R A+ + + + + + D L+ + D + + + Sbjct: 449 ---TDKELAKKGAVEFLELIAELRET-AKTKSISDLVKIILDKSGLSELYRKDGDEDR-L 503 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 I++ +++ L + V + E+ L + + V + T+ + Sbjct: 504 ENIKELVNSML--LLEKENNAPVDIIEYLQEI--SLYTDLNTDTENQDKVKLMTIHISKG 559 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V L G +GV P +S K +R +++R L A+ A+++ Y+ Sbjct: 560 LEFPYVFLCGFTEGVLPSA--------LSVKERRA--RAIEEERRLMYVAVTRAEKRFYM 609 Query: 730 SYI-GRSIQDNSERFPSVLVQELIDYI 755 + G + ++PS + E+ D Sbjct: 610 TDSEGFNFTTGLNKYPSRFLFEIKDEF 636 >UniRef50_Q98PM4 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma pulmonis RepID=Q98PM4_MYCPU Length = 734 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 48/402 (11%), Positives = 119/402 (29%), Gaps = 66/402 (16%) Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 I + + +F ++ +PY I +++ ++ L L + Sbjct: 342 KYSQIAIFTRTAKYSRDLEEELFQNS-----IPYVIYGGTRFFEREIVKDLLAYLRLI-N 395 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 + +++ P R I + L + +E G + + Sbjct: 396 NSSEVSFIRVINTP----RRSIGPKTLEKIITLASEKGY------------------EKS 433 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + F + Y ++ Q + + L + + R L ++ Sbjct: 434 FEF----LENLYINKNLQSFFS---------------LKDLEKFIQAILEARESLKNDQK 474 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 + L + ++ + ++ + + + L L D L + Sbjct: 475 IAYVLEKLVEKIDYKSFCIFDRNKRKDQVDFDIDQLYESIAFWEEENPELL--LDDYLNE 532 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR--QLAPLGFDLMSQKP 701 Q + V+I T + + F V + G+ + +P L +D Sbjct: 533 ISLLTSGDQNENSDQVSIMTAHSAKGLEFDYVFITGLAEKHFPHFLSLKSNDYD------ 586 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIG----RSIQDNSERFPSVLVQELIDYIGQ 757 +++R L A+ A+++L+++ ++ E S ++E+ Q Sbjct: 587 -----DEIEEERRLCYVAVTRAKKQLFLTAPLTLYWARDREKEELEISRFIEEMGLASSQ 641 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER 799 ++ D + + F QNY + Sbjct: 642 NYEKRFSHKSLNDTDSYYQNSDYVSFDWKEKFVEQNYAKDNQ 683 >UniRef50_A8TD22 UvrD/REP helicase n=2 Tax=cellular organisms RepID=A8TD22_METVO Length = 1085 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 65/476 (13%), Positives = 154/476 (32%), Gaps = 36/476 (7%) Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNK--RPLDPLDSS---ITFHVCHSPQREVEVL 389 L I D+ + ++ E + N+ + D + I E E + Sbjct: 295 LEKITLDVNYRSTDEIVELSKELIQNNPNRENKESKAHDGNGEKIKILKTPDDYSEAEWV 354 Query: 390 HDRLLAMLE----EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 + + ++ +D T P+DI ++ I + A +R +P Sbjct: 355 AEEIEKLISTKNDDDLTYEPKDIFILTRTIKDGKKY-----SEALKNRMIPSEYIGNHNL 409 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR-- 503 Q P+++ ++ +++ + F S +D + R + E ++ + Q E + Sbjct: 410 QEQPIIKDVLAYINVVSNPFESG-----VDFKRIFTREGVDEHDIQKINQKAKELSYKNA 464 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD---ESSGLIAEL 560 G ++ + E S + + + ++ Sbjct: 465 EGDGIYYTLQMLYTNEYNEYNEYNKDNKDNKDNNEELDTLTNSNVDLNLNLDLEDKNKDI 524 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 + + + +L +++ L L D+ D + + ++ Sbjct: 525 LLKIFENIKELICYKKNHKPSDTLIYLLNKKTDIYKIEAYNDTKLSRKNIHLLNSLVNVV 584 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 + + +S + L+ L+ ++ ++ + V I T+ + KVV + + Sbjct: 585 EDFEETSNLEFENISEYLNILSN-LEIQQENEFDNSNTVKIMTIHQSKGKEAKVVFIGDL 643 Query: 681 NDGVYPRQLAPLGF----DLMSQKPK---RGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 D P + F +LM + K ++++ L A+ A +KLY+ Y Sbjct: 644 ADRHLPLRYNSKEFTVPVELMKSRIKNNVPEKELHKEEELRLLYVAMTRAMKKLYLVYPK 703 Query: 734 RSIQDNSERFPSVLVQELIDYI---GQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 R + + PS + E I++I + SE + + Sbjct: 704 RYTGNKRDVKPSEFL-EYINHIYNEKVEFIESKPFENHNVYSETLLSKKINEYEKL 758 >UniRef50_Q68WT1 DNA helicase II n=17 Tax=Rickettsieae RepID=UVRD_RICTY Length = 658 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 65/436 (14%), Positives = 143/436 (32%), Gaps = 71/436 (16%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS---ITFHVCHSP 382 F + ++ + A N+ +++ + + L +S I C S Sbjct: 274 FEKDFAGATIIKLEQNYRSTLPILAAASNVINNNKNRHSKTLWTDSASGEKIKIISCLSD 333 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + E + + L + +I ++V + F F A + +PY I Sbjct: 334 KEEARYIACEI-DKLVREERYHAGNIAILVR-----AGFQTRSFEEAFINSAMPYKIIGG 387 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + ++ + + ++ + + +++VP + I L +R + E I Sbjct: 388 LRFYERMEIRDVLAYIRISLNQNDNLALERIINVP----KRAIGAASLNKIRSYALERNI 443 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 + ++ E+ A+ Sbjct: 444 ---------------------------------------SNFVAIKEILETGIFKAKSYE 464 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L LL +++ W + P+ + D L + +TE A IE ++ Sbjct: 465 SLKDLLTKIDNWYEKFITDTPINVVKTILDDSGYLSMLQEEKTEEAFGRIEN-INEMLRA 523 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + + + ++ E + + G V I TL + + F VV L G + Sbjct: 524 IAEFN-----DIHDFIEHSSLVMENEVLETNY-GGSVTIMTLHAAKGLEFDVVFLPGWEE 577 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 GV+P Q + + + ++G +++R + + A++ LYI++ Sbjct: 578 GVFPSQRS------LDEDGEKG----LEEERRIAYVGITRAKKDLYITHAESRKIFYEIV 627 Query: 743 F--PSVLVQELIDYIG 756 PS + E+ D I Sbjct: 628 HSCPSRFINEIPDEIT 643 >UniRef50_B0KVA6 Putative UvrD/REP helicase n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVA6_9BACT Length = 710 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 55/387 (14%), Positives = 129/387 (33%), Gaps = 69/387 (17%) Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + + EVE++ ++L +L ++P T +D ++ + P F A Sbjct: 348 KILQTETLEDEVELVISKILEILAKEPQYTYKDFAILARANNHLDP-----FVMALRKYG 402 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 LPY + R + ++ L + + ++ +L++ L +I + + L Sbjct: 403 LPYQLVGNRGLYDRDEVRDILAFLRVIINTQDGINLYRVLNIESL----EIPYKEISEL- 457 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 L + W+ V + Sbjct: 458 --------------------------------------LSKSRYEKTDLWEQVKKSKD-- 477 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETEA----A 608 +A L+ + +++ + + P E V LN F + Sbjct: 478 -------EKVAFLVKTIEGFQKNITKNTPTEMVFEVVNSTNYLNQFLEEETIENELCIKN 530 Query: 609 MTLIEQQWQAIIAEGLGAQYGDA--VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + L Q+ Q + V L D + + + ++ +N+ T+ Sbjct: 531 LNLFLQRVQKFEVDYHNETGEMPTVVNLVDYLDMIIEAGENPAQAEIEDIDTINLMTVHS 590 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDL---MSQKPKRGDRSRRDDDRYLFLEALISA 723 + + F VV ++ + G +P + ++ + ++ ++R LF + A Sbjct: 591 SKGLEFPVVFMVNLVSGRFPTRNQGDTIEVPEELIKETLPTGNEHIQEERRLFYVGMTRA 650 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQE 750 Q+ L+++ +G++ + PS +QE Sbjct: 651 QKYLFMT-LGKNYGGKRDTIPSGYLQE 676 >UniRef50_C7NAU4 UvrD/REP helicase n=5 Tax=Fusobacteriaceae RepID=C7NAU4_LEPBD Length = 735 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 60/433 (13%), Positives = 132/433 (30%), Gaps = 85/433 (19%) Query: 370 LDSS----ITFHVCHSPQREVEVLHDRLLAMLEEDP--TLTPRDIIVMVADIDSYSPFIQ 423 D S I + + E D ++ +++ +D+ ++ Y Q Sbjct: 311 TDGSDGEKIKIYNAMTVYDE----ADFIVTEMKKKKRDGADYKDMTIL------YRTNAQ 360 Query: 424 A-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 + V +PY I ++ ++ LSL +++ + + +++VP + Sbjct: 361 SRVLEEKLLSANIPYKIYGGMQFFQRKEIKDILAYLSLLNNKNDNHNFYRIINVP----K 416 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 + E+ L +++ NE I +M A Sbjct: 417 RSVGEKTLEKIQEVANEKNI---------------------------------SMLEALH 443 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 + + A L + L +E ++E + Sbjct: 444 YIDEI-------PVRAATKLALKEFYNLMQGIYSSL-EEMSIKEIFDEILIRTRYIDSIE 495 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNIC 662 E + IE+ +II + + L+ D + L V + Sbjct: 496 DNKEDRVKNIEELLNSIIE---LEKQNPNMSLNEYLDMI--SLSSSTDEMEDDENYVKLM 550 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 T+ + + F V L GM DG++P + + ++ + A+ Sbjct: 551 TIHSSKGLEFDYVFLAGMEDGLFPSISFDSPEEELEEERRL------------CYVAITR 598 Query: 723 AQQKLYISYIGRSIQDNSE---RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 A+++L+ISY + R PS + E+ + G + + + ++ Sbjct: 599 AKKELFISYSSSRKIWGKDDNLRRPSRFIYEMK---QDNLEYVGGKYASLKGQSSAPRSF 655 Query: 780 LTCLHTRMPFDPQ 792 + PF Sbjct: 656 TPKIENFNPFSKD 668 >UniRef50_A8SMG4 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMG4_9FIRM Length = 750 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 47/390 (12%), Positives = 116/390 (29%), Gaps = 68/390 (17%) Query: 401 PTLTPRDIIVMVA-DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 DI V+ + S++ +A + Y + ++ ++ L Sbjct: 344 EGYNLSDIAVLYRANFQSFA------IENALRKNSIAYRMVGGLKFYDRKEIKDILAYLK 397 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 L + +++ P + I L+ L ++ I Sbjct: 398 LIANPKDDNAFRRIINYP----KRSIGNVSLQKLEEYCYSENI----------------- 436 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 + + + + +L + + + + Sbjct: 437 ----------------------SLFDGLFRNEFLDSVSKKLRTEFENFRDMIFGFITCVE 474 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 +E + D + + + + E + G + L + Sbjct: 475 DTE-VEILIKELLDSIKFVDYLRENEKKEFEKKAENINLFLEEISNSYKGIKLLEYLETN 533 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 L +D+ S V + T+ + + +KVV ++GM++G++P + + D Sbjct: 534 SLLSDIDKTEDSD----DTVTLTTIHSAKGLEYKVVFIIGMDEGIFPSERSIKERD---- 585 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQ 757 +++R LF A+ A++KL+IS S V E+I+Y+ Sbjct: 586 -------DGLEEERRLFYVAITRAKEKLFISSTKSMTMYGKLNLYRVSSFVDEIINYVDD 638 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRM 787 + ++++ ++R Sbjct: 639 KSINLEFNFDEERVTTSKIRNDAYTDYSRT 668 >UniRef50_B3EU74 UvrD/REP helicase n=4 Tax=Bacteroidetes RepID=B3EU74_AMOA5 Length = 757 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 51/434 (11%), Positives = 132/434 (30%), Gaps = 73/434 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I + E ++ + + ++ L D ++ +S S I+ A Sbjct: 323 IGLIRATTDAEEGRLVAASIFEIKMQNQ-LRNEDFAILYR-TNSQSRAIE----EALRKI 376 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 LPY + + ++ ++ L + E + +++ P + I + + Sbjct: 377 NLPYRMLGGTSFYQRKEVKDLLAYLRFIVNHNDEEALKRIINEP----KRGIGPSNIEKM 432 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL-PYDE 552 ++ GI W+ + + Sbjct: 433 VVAASDHGI---------------------------------------PLWEVMCNAKNF 453 Query: 553 SSGLIAELVGHLASLLMQLNIWR---RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 SG +AE V A ++ + + + + + + + + + Sbjct: 454 LSGRVAEAVEEFAHMIQAMALDLTKKDAYEIASEIAKRSGLLKSLYEDKTVEGLARYENV 513 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + +A A L+ ++A + E +++ T+ + Sbjct: 514 QELLSGIKAFTANPEQVD----TSLATFLQDVALATNNENEEDGE--DKISLMTIHAAKG 567 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + FK V ++G+ + ++P + G R +++R LF AL AQ+K+++ Sbjct: 568 LEFKYVYIVGIEEDLFPSSM------------MLGSREDLEEERRLFYVALTRAQKKVFL 615 Query: 730 SYIGRSIQDNSERFP--SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 SY + + S + E+ ++ + + + + + Sbjct: 616 SYTISRYRFGKLKQCEVSRFIGEIDPVYLHMAHVTNSYTEKSNTNYTKQFISSMRITPQQ 675 Query: 788 PFDPQNYQPGERQS 801 +Q + S Sbjct: 676 KSVKVKFQAYAQSS 689 >UniRef50_Q89A21 ATP-dependent DNA helicase rep n=2 Tax=Buchnera aphidicola RepID=REP_BUCBP Length = 670 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 61/390 (15%), Positives = 123/390 (31%), Gaps = 72/390 (18%) Query: 374 ITFHVCHSPQREVEVLHDRLLAML---EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 + + + E +L L + + +D ++ +Y +F Sbjct: 309 VEIISAKNEEDE----ARVILQTLMLHKSNYNAQYKDYAILYR--SNYQV---KIFEKFL 359 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 +PY I + S P ++ I+ L L + + L +++ P+ I L Sbjct: 360 IKFKIPYKILANISFFSRPEIKDLIAYLRLIINPDDNAAFLRVVNRPL----RGIGAVTL 415 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 + L++W + + M S +S+LP Sbjct: 416 QKLKEWSKKRN-------------------------------QSFFMASLDIGLESILPV 444 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAA 608 L L+ ++ ++ L LE+ + L A+ Sbjct: 445 HNLKSLQE-----FVYLIQTIS-YQIQLNPIEVLEKLVATIKYEKWLMRSLKFSKLYVAS 498 Query: 609 MTLIEQQWQAIIAEGLG-AQYGDAVPLSLLRDELAQRL--DQERISQRFLAGPVNICTLM 665 + I II E + L D +++ + + V + TL Sbjct: 499 IKNISIVLNWIINELKYKIMNSKKFVMKYLIDIISEFILQNSLNEDIVINNDYVQLMTLH 558 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + F V ++G+ +GV P + + D++R L + AQ+ Sbjct: 559 ASKGLEFLYVFIVGVEEGVLPYYRNTTMENNI------------DEERRLAYVGITRAQK 606 Query: 726 KLYISYIGRSIQDNSERF--PSVLVQELID 753 KL++SY + Q PS ++EL Sbjct: 607 KLFLSYAIQRCQYGVVINTKPSRFLRELPQ 636 >UniRef50_Q1DAU6 ATP-dependent DNA helicase, UvrD/REP family n=6 Tax=Cystobacterineae RepID=Q1DAU6_MYXXD Length = 691 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 45/415 (10%), Positives = 116/415 (27%), Gaps = 67/415 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + C + + E + + + ++ DI V+ P ++ Sbjct: 317 VKVVTCPNDEEEARFVAHEIQKHMAL--GISADDIAVLYRTNGQSRPI-----EETLREK 369 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 + Y + ++ I+ + ++ +L +++VP I + + L Sbjct: 370 NIGYEVVGGSEFFDRREVKDVIAYFKVIVNKLDEISLLRIVNVP----SRGIGDVTMERL 425 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + A W + + Sbjct: 426 -------NVH--------------------------------ARGEGVTLWTVMKKATDY 446 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM-LNAFFLPDAETEAAMTLI 612 L + + + +R + + ++ A + A Sbjct: 447 EDLPPGAGARVMDFVDLVERYRAAYEHGQLANVTRKLLEEIGFREATRAHATSATAADKK 506 Query: 613 EQQWQAIIAEGL--GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 + ++ + G L + L+ QE V + T+ + + Sbjct: 507 LKGVDGVLNSLENFEKREGPKASLPTYLNRLSLDTRQEEEEVPGANRRVTLMTVHASKGL 566 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 +++V +GM + + P +G+ +++R L + A++ LY++ Sbjct: 567 EYRLVFFIGMEEDLMPH------------GGMQGEAQNLEEERRLCYVGITRAKEVLYLT 614 Query: 731 YIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 ++ E R PS +++L + + L E A+L Sbjct: 615 RAATRVKRGKEVPRTPSRFLEDLPPEVIEVVELDAPRQGPPTTEEKNFFANLKER 669 >UniRef50_C9M511 ATP-dependent DNA helicase PcrA n=2 Tax=Synergistaceae RepID=C9M511_9BACT Length = 673 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 52/394 (13%), Positives = 117/394 (29%), Gaps = 73/394 (18%) Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 C + E E++ + L D+ ++ + + Sbjct: 338 QVWNCPTSDDEAELITTEIERFLSS--GYRASDVAILYR-----MNALSRRIEESLLSHN 390 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 LPY + + + +S L L + + + + ++P + L L Sbjct: 391 LPYQVVRGQGFFDRREVRDVLSYLRLALNPYDRASLDRVGNLP----TRGLGPRSLDKLD 446 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 ++ A W A A+ Q + + Sbjct: 447 AYLLSHR---------------TADPADVWAA--------VAQTGAELSGQGAAGARQLA 483 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 G + E++G L L++ + +L E Sbjct: 484 GAMGEILGCGGDLKRALDVILMRIG-----------YETVLQKIDPAGWEDRY------- 525 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 ++ A GD++P L + L D++ Q +N+ TL + + F + Sbjct: 526 --DNVMEILSLAGDGDSLPELLAQAALYTDADRDSGGQ-----GINLSTLHGAKGLEFPL 578 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V ++G+ +G++P + D + +++R L + AQ++L ++ + Sbjct: 579 VFMIGLEEGIFPHSRSSD------------DPAEIEEERRLCYVGMTRAQERLILTRVRE 626 Query: 735 SIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEA 766 S + PS + E+ + Sbjct: 627 RRLFGSTTTQRPSRFLAEIAPDLRDEFDFGEVRP 660 >UniRef50_Q1J014 UvrD/REP helicase n=4 Tax=Deinococci RepID=Q1J014_DEIGD Length = 741 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 54/396 (13%), Positives = 125/396 (31%), Gaps = 66/396 (16%) Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 RP+ + FH + E + + + L + + D+ V+ Y Sbjct: 312 EKTLRPVKEDGHPVLFHRATDQRAEGDFVAEWLTRLHA--EGMRFSDMAVL------YRT 363 Query: 421 FIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 Q+ V + +P I ++ ++ L + + ++ P Sbjct: 364 NAQSRVIEESLRRVQIPAKIVGGVGFYDRREIKDVLAYARLAINPDDDVALRRIIGRP-- 421 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + I + L L +W +G + +EL + L R Sbjct: 422 --KRGIGDTALERLMEWARVNGTSILTACAHAQELNI-----------LERGA------Q 462 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE-RPLEEWLPVCRDMLNAF 598 E+ L + S + G +++ + + L QE + + L ++++A Sbjct: 463 KAVEFAG-LMHAMSEAADNDEPGPFLRYVIETSGYLDLLRQEGQEGQVRLENLEELVSAA 521 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 E E + + D + ++ ++ Sbjct: 522 EEWSRENE-------GTIGDFLDDAALLSSVDDMR-------------TKQENKDVPEDA 561 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 V + TL + + F VV ++G +G+ P + A + +++R LF Sbjct: 562 VTLMTLHNAKGLEFPVVFIVGTEEGLLPSKNA------------LLEPGGIEEERRLFYV 609 Query: 719 ALISAQQKLYISYIGRSIQDNSERFP--SVLVQELI 752 + A ++L+++ +Q S ++E+ Sbjct: 610 GITRAMERLFLTAAQNRMQYGKTLATEDSRFLEEIK 645 >UniRef50_A6DKH4 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DKH4_9BACT Length = 674 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 58/392 (14%), Positives = 118/392 (30%), Gaps = 76/392 (19%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + C S +RE + + D +L + T D ++ S A Sbjct: 320 LKVVACGSEEREAKAIADTILNKVNGRQN-TYGDCAILYR-----SNHQSRALEDAMRRG 373 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY I + + ++ L + + L +LDVP I ++ L Sbjct: 374 RIPYKIIGDTSFYERKEVRDALAFLKIIHNPRDDFSFLRVLDVPP----RGIGPRTIKTL 429 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R+ E + +L + Sbjct: 430 REKAVE----------------------------------------NKTSVYDLLRNPQF 449 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV------CRDMLNAFFLPDAETEA 607 L ++ +R+ ++ PL + + L + P + E Sbjct: 450 MENFGRSSDALMKFNNRVEEFRQKFQEKVPLAGLVEQYFEGVGYIEGLGRMYKPREDAEK 509 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG--PVNICTLM 665 + + I EG + +PL + + +++ R Q V + T+ Sbjct: 510 RYQNVLEIIHTI--EGREKEDKRCIPLQEYLESV-SLMEEYRRRQEKDEDPNAVMLLTVH 566 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + F V + GM ++P + + ++R LF AL A+ Sbjct: 567 ASKGLEFPSVFVTGMEKNLFPHEKSAG-------------LKALAEERRLFYVALTRAKS 613 Query: 726 KLYISYIGRS--IQDNSERFPSVLVQELIDYI 755 L +++ + S+R PS + EL + Sbjct: 614 DLILTWSKMRKAGRRMSQRMPSQFLGELPKDL 645 >UniRef50_B0P0N3 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0P0N3_9CLOT Length = 745 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 68/510 (13%), Positives = 159/510 (31%), Gaps = 108/510 (21%) Query: 311 IYLLSDLESSQELDAFVDVTPD-NLLHNIQSDI---LELENRAVAGVNIEEFSRSDNKRP 366 Y L + + F+ PD + +DI L + I + Sbjct: 264 QYQLMKVLCGYHKNLFIVGDPDQTIYSWRGADINYLLNFDKAFPDVKTIMMNENYRSTPQ 323 Query: 367 LDPLDSSIT-----------FHVCHSP-----------QREVEVLHDRLLAMLEEDPTLT 404 + + +S+ +CHS + E + + D+++ + ++D ++ Sbjct: 324 ILSVCNSLIDKNKNRMKKDLLPMCHSKNSVLYYHGDTSEEESDWIADQIIKLHKKD--IS 381 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 +DI ++ + ++ + +PY+I ++ +S L + + Sbjct: 382 YKDITILYR-----AHYVTRTLEETLLKKKIPYSIYSGIQFFERMEVKDALSYLRMITYK 436 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 L +++VP + +I ++ + +L+ +VN ++ Sbjct: 437 DDLS-FLRIVNVP----KRNIGKKRMEFLQAYVNAH--------------------HCSF 471 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 L + ++ D + ++ + + Sbjct: 472 YEALKECV-------EDPIFKGTDAKD---------------FISLIDAF--------SV 501 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL---SLLRDEL 641 ++L+ E T Q+ +AE A Y + +LL D L Sbjct: 502 TYEQRTISEVLSDILDRSGYEEMLRTTGNQERLDNLAELKQAVYDYEISCGEEALLPDYL 561 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 + V + T+ + + F V L +N+G++P + + Sbjct: 562 DHIALFTNSDVTDDSDKVKLMTVHAAKGLEFPHVFLCALNEGIFPSKKTSTIEGM----- 616 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL----IDYIGQ 757 +++R L A+ A + L++S D S R+PS + ++ ++Y+ + Sbjct: 617 --------EEERRLAFVAMSRAMKSLFLSESHGKNFDGSTRYPSRFILDIDQKFLEYVKK 668 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRM 787 E N R T Sbjct: 669 PEDTLIAETKNYIHYSNRYLDGYVAEQTFQ 698 >UniRef50_B1XW04 UvrD/REP helicase n=41 Tax=Bacteria RepID=B1XW04_POLNS Length = 788 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 55/450 (12%), Positives = 129/450 (28%), Gaps = 92/450 (20%) Query: 325 AFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS--ITFHVCHSP 382 + ++ Q+ A I S K D + + S Sbjct: 282 LYEKQYHPLMVKLEQNYRSHGHILDTANHLIANNSERLGKNLRTDADHGEPVRIYEAPSD 341 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISD 441 E L D + A++ + + ++ ++ Y Q+ + A +PY + Sbjct: 342 HAEAAWLVDEIKALV--NSGIKRTEVALL------YRSNAQSRIIEHALFSAGIPYRVYG 393 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 ++ ++ L ++ +++ P I + L+ Sbjct: 394 GLRFFERAEIKHALAYSRLLENPNDDTSFSRVVNFP----TRGIGARSIEVLQ------- 442 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 D ++ L L G + Sbjct: 443 -----DAARAQQCSLY------------------------------LAASTLEGKAGAAL 467 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 G L+ + R +E + ++ + + E + + +++ A A Sbjct: 468 GGFVRLVDHMREATRHNTLPETVEFVIQH-SGLIQHYLS-EREGQDRVENLQELINAATA 525 Query: 622 EGLGAQYGDAV-----------------PLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 YG PL+ L+ + V + T+ Sbjct: 526 FIAEEGYGQDAAAAMLSGENAPGVAEVSPLAAFLSH--ASLEAGDNQAQAGQDAVQLMTV 583 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + + F V + G+ +G++P + + + + +++R L A+ A+ Sbjct: 584 HSAKGLEFTSVFITGLEEGLFPHENSVNEQNGL------------EEERRLMYVAITRAK 631 Query: 725 QKLYISYIGRSIQDNSER--FPSVLVQELI 752 ++LY+S+ + R PS ++EL Sbjct: 632 ERLYLSHTQSRMLHGQVRYNMPSRFLEELP 661 >UniRef50_C1TPS7 DNA/RNA helicase, superfamily I n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TPS7_9BACT Length = 656 Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats. Identities = 60/386 (15%), Positives = 120/386 (31%), Gaps = 73/386 (18%) Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + E + D + +L D+ V+ + F R LPY + Sbjct: 328 RAEARYVSDVVEELLSL--GYRYTDMAVLYR-----MNALSRNFEQEFVKRGLPYRVVKG 380 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 A ++ IS L L + + + + +VP + +GL + +++ Sbjct: 381 TAFYDRKEIKDAISYLRLAVNPRDASALARVANVPP----RGLGAKGLESVESYLSTH-- 434 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 + + TW R+ G +G I +L Sbjct: 435 --------------ASEARTTWC----RIADGGCGLRGKG-----------DKGIRDLAR 465 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 H+ SL+ + R + + + F E +T I Sbjct: 466 HMISLIDIGSDLNRAVEYIMDVIGYGSYLEKGYPDQFEERRENVMELTSI---------- 515 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + L + E+A DQE +++ +L + + F VV ++GM D Sbjct: 516 -----SPGSESLEDVLAEIALYTDQEVDDIP---DGISLSSLHAAKGLEFPVVFIVGMED 567 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 G++P + G R +++R L + A+++LY++ S Sbjct: 568 GIFPHGRSLD-----------GGRDELEEERRLCYVGMTRAEERLYLTSSRFRRLFGSVM 616 Query: 743 F--PSVLVQELIDYIGQSHYLPGDEA 766 S + E+ + G+ Sbjct: 617 NNDVSRFIWEIPENYRVVESRAGEGP 642 >UniRef50_D1B9M8 UvrD/REP helicase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9M8_THEAS Length = 653 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 55/381 (14%), Positives = 125/381 (32%), Gaps = 74/381 (19%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I + + + L D +L + + +D+ ++ + ++ + Sbjct: 317 IRILKARNDEEDSRCLVDWILEL--QGEGYALKDMAILYR-----VNALSRLYEQRLIEA 369 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY + ++ ++L+ L +++VP + I + L Sbjct: 370 GIPYRVIRGLGFYDRKEIKDVLALMRLAIQPRDLVSFERMVNVP----QRGIGAKSTEAL 425 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 W+ + ++ + E WR L + P Sbjct: 426 WAWMGQ------LEAQDPGEF---------WRSVL----------------EGDAPL--- 451 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 G E + LA ++ + R + R +L + + + E Sbjct: 452 KGRAREGIRALARGMLGILSLRGNIRLA---------VRYILEEYGYGEHLEREDQSTFE 502 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 ++ Q + + +P + D L++ V++ TL + + F Sbjct: 503 ERLQNV------EELMSVLPEGSIDDVLSEVALFSDADVASGDDRVSLLTLHAAKGLEFP 556 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 VV ++G+ +G++P DRS +++R LF + AQ++L++S Sbjct: 557 VVFMVGLEEGIFPNAKCRE------------DRSLLEEERRLFYVGMTRAQERLFLSGAA 604 Query: 734 RSIQDNS-ERFP-SVLVQELI 752 R + S P S + E+ Sbjct: 605 RRVLFGSFMMNPFSRFLSEIP 625 >UniRef50_Q3F0Y3 ATP-dependent DNA helicase pcrA n=2 Tax=Bacillus thuringiensis RepID=Q3F0Y3_BACTI Length = 653 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 58/440 (13%), Positives = 146/440 (33%), Gaps = 71/440 (16%) Query: 326 FVDVTPDNLLHNIQSDIL---ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSP 382 + + P+ L +Q + + N + + V + + + I + Sbjct: 269 YQKIHPETQLILLQENYRSTQNIVNASNSLVGNNKMRLEREAFSVSGVGDDIHVFRFNDA 328 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 RE + + ++ M ++ +D V+ ++ S ++ A D +PY I Sbjct: 329 SREADFVARMIVNM-KKATQCDWKDFAVLYR-MNFQSKHLE----LALRDENIPYKIVGT 382 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + + +++ L V + A ++T++ + E Sbjct: 383 TSF-------------------YDRKEIKDL--VSYIRASHNLTDD-------YALE--- 411 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 I+ + + + + + R+ A+++ V + + + Sbjct: 412 -RVINVPSRKIGKTTIEKIYAFAHE-RRIPFFVALQNID----EVAALSKINKSTVAKIK 465 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 A+L+ +L+ L E +++ + D E E T IE + Sbjct: 466 EFATLMQELSQL--ALVGEFSATKFMQTLIKKTDFMGQFDKEKEEDETRIEN-VTHLRDY 522 Query: 623 GLGAQYGDAV--PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 + L+ E+ D + + F V + ++ + + + ++G+ Sbjct: 523 ARHWDAQEKEINSLAQFVSEITLDGDSDEDEEDF----VTLTSVHSAKGLEWPETFVIGL 578 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 D V+P + S +++R L A+ A ++LY+++ + S Sbjct: 579 EDDVFPH------------YRSKQKLSDLEEERRLMYVAMTRAGKRLYLTHSAFKYEYGS 626 Query: 741 ERF----PSVLVQELIDYIG 756 ++ PS + E+ D Sbjct: 627 QKPIRQKPSPFLGEIPDNYK 646 >UniRef50_A6VEA1 ATP-dependent DNA helicase Rep n=102 Tax=Proteobacteria RepID=A6VEA1_PSEA7 Length = 706 Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats. Identities = 62/412 (15%), Positives = 134/412 (32%), Gaps = 68/412 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 I C + E E + +L + + ++ Y QA + Sbjct: 349 IRVIRCRNEDAEAERIAMEILTLHLRTE-RPYSEFAIL------YRGNHQAKLMELKLQH 401 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY +S + ++ +S L + L +++VP R +I L Sbjct: 402 HQIPYRLSGGTSFFGRQEVKDLMSYFRLLVNPDDDNAFLRVINVP----RREIGSATLEK 457 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L + + I D + E + H R + G + A+ Sbjct: 458 LGNYATQRNISMYAACDEMGLAEHLDSRFHERLQRFKRWMDGIRRQCAE----------- 506 Query: 553 SSGLIAELVGHLASLLMQLNI---WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 E + L S++M ++ R+ + ++ E + ++ A E Sbjct: 507 -----NEPIAVLRSMVMDIDYENWLRQNASSDKVAEFRMSNVWFLIEALKNTLERDEEGD 561 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 IEQ + +LRD L ++ ++E ++ V + TL + Sbjct: 562 MTIEQAIAKL----------------VLRDMLERQQEEEEGAEG-----VQMMTLHASKG 600 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V ++GM + + P + + + +++R L + A+Q L + Sbjct: 601 LEFPYVFIMGMEEEILPHRSSIEADTV-------------EEERRLAYVGITRARQNLAM 647 Query: 730 SYIGRSIQDNSER--FPSVLVQEL-IDYIGQSHYLPGDEALNCDESEARVKA 778 ++ + Q PS + EL + + + + + A + Sbjct: 648 TFAAKRKQYGEIIDCSPSRFLDELPPEDLEWEGLEDAPQEVKAAKGNAALAD 699 >UniRef50_C7M3I8 UvrD/REP helicase n=3 Tax=Bacteroidetes RepID=C7M3I8_CAPOD Length = 789 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 126/400 (31%), Gaps = 70/400 (17%) Query: 374 ITFHVCHSPQREVEVLHDRLL--AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 I H + E + + M + P + V+ +S S I+ A Sbjct: 326 IKVHRSPTDADEGRFVASSIFENKMQHQLPN---GNFAVLYR-TNSQSRAIE----DALR 377 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 R +PY I + ++ ++ L L + E ++ +++ P I E + Sbjct: 378 KRDIPYRIYGGLSFYQRKEIKDMLAYLRLIINPNDEEALVRIINFPA----RGIGETTME 433 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 L + + + I + +LP +T ++ M Sbjct: 434 KLT--LAANHYKKSIFEIMYNINKLPELHINTTTK--QKLTDFVVMILNFQALNQKANAF 489 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 E + +A+ G L E A M Sbjct: 490 EVAEQVAKKTGLLQEFKK------------------------------DGTPEGIAKMEN 519 Query: 612 IEQQWQAIIA--EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 IE+ + EG LS + L + + V + T+ + Sbjct: 520 IEEMLNGMKDFVEGQEDVADSRASLSEYLE--DVALATDMDKEIGDDDRVALMTIHLAKG 577 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V ++GM + ++P ++ R+ +++R LF AL A+++ Y+ Sbjct: 578 LEFPYVYVVGMEEDLFPSAMSIQS------------RNDLEEERRLFYVALTRAEKQAYL 625 Query: 730 SYIGRSIQDNS--ERFPSVLVQEL----IDYIGQSHYLPG 763 +Y + + PS ++E+ + Y+ S P Sbjct: 626 TYAENRYRWGKLSDAEPSRFIEEIDERYLQYLTPSISNPN 665 >UniRef50_B7AA42 UvrD/REP helicase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AA42_THEAQ Length = 701 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 59/426 (13%), Positives = 120/426 (28%), Gaps = 88/426 (20%) Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 RP+ + S + E + + + + + V+ Sbjct: 308 LRLEKTLRPVKKGGEPVRLFRAESARDEARFVAEEIARL-----GPPFDRVAVL------ 356 Query: 418 YSPFIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y Q+ + A A R +P + ++ ++ L + + + +L+ Sbjct: 357 YRTNAQSRLLEQALASRGIPARVVGGVGFFERAEVKDLLAYARLSLNPLDAVSLKRVLNT 416 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P I + ++ E G Sbjct: 417 PP----RGIGPATVEKVQAIARERG----------------------------------- 437 Query: 537 MESAQGEWQSVLPYDESSGLIAELV---GHLASLLMQLNIWRRGLAQERPLEEWLPVCRD 593 LP E+ + A + L + L + R Sbjct: 438 -----------LPLFEALKVAALTLPRPEPLRAFLALMEELMDLAFGPA-----EAFFRH 481 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 +L A P EA E + + + A+ +A L D L Sbjct: 482 LLLATDYPAYLKEAYPEDAEDRLENVEELLRAAK--EAESLMDFLD--KVALTARAEEPA 537 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 G V + TL + + F VV L+G+ +G+ P + + + +++R Sbjct: 538 EAEGRVALMTLHNAKGLEFPVVFLVGVEEGLLPHRSS------------LSTQEGLEEER 585 Query: 714 YLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 LF + AQ++LY+SY PS ++E+ + + + + + Sbjct: 586 RLFYVGVTRAQERLYLSYAQEREIYGRLEPVRPSRFLEEVDEGLYEVYDPYRQSSRKPTP 645 Query: 772 SEARVK 777 R Sbjct: 646 PPHRAL 651 >UniRef50_Q600N7 ATP-dependent DNA helicase n=6 Tax=Mycoplasma RepID=Q600N7_MYCH2 Length = 769 Score = 105 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 74/468 (15%), Positives = 160/468 (34%), Gaps = 80/468 (17%) Query: 338 IQSDILELENRAVAGVN------IEEFSRSDNKRPLDPLDSSITFH---VCHSPQREVEV 388 +Q+ IL+ R+ + IE K+ + I H + + EVE Sbjct: 303 LQTVILDKNYRSTQNILDAANNLIENNQNRIKKKLVASSKEKIEIHFEDLANERGAEVEW 362 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 ++ ++ ++ ++ +T RDI ++ + Y I+ F +PY + Sbjct: 363 IYRKIQELITKNK-VTYRDIAILARS-NFYFKQIETKF----DGHNIPYFRHGASPLVTK 416 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 + + L + D+ +++VP + I +NE ++G++ Sbjct: 417 KEIREALYFLKVIDNSDPY-AFEQIINVPP--KKIGIAT------INKLNELAAQFGLNL 467 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 + + Y+ + Q +P + L + L + Sbjct: 468 HDF-------------------LFKYYSGKINFKGKQGKIPLGHDNQLK---IKVLLERI 505 Query: 569 MQLNIWRRGLAQERPL--EEWLPVCRDMLN--AFFLP--DAETEAAMTLIEQQWQAIIAE 622 ++ + +++P + + V L +F DA+ + + +++ I+ Sbjct: 506 SAAKRFKSQIEEKKPCIFQFYSQVLDSFLKKIDYFDAIKDAKQASDTRNLLEKYYKIMDN 565 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 A + D L Q +N+ T+ + + F+ V L+GMN Sbjct: 566 WQKANPEKKLS-----DYL-DYAAISHFEQTESQNKINLLTVHSSKGLEFEYVFLVGMNQ 619 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS--YIGRSIQDNS 740 GV+P Q + S +++R L A+ A++ LYI+ Y S Sbjct: 620 GVFPAQKVLD----------QNSTSEYEEERRLAFVAVTRAKRVLYITNGYRAPSFARGL 669 Query: 741 ERF-------PSVLVQELI---DYIGQSHYLPGDEALNCDESEARVKA 778 + S V+E+ + Q L LN + ++ + Sbjct: 670 PQKFKTNQNIVSAFVKEMKIKAERFAQFRKLDETGKLNYTKDKSEIVE 717 >UniRef50_C0QD81 PcrA2 n=2 Tax=Bacteria RepID=C0QD81_DESAH Length = 1157 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 61/401 (15%), Positives = 117/401 (29%), Gaps = 87/401 (21%) Query: 374 ITFHVCHSPQREVEVLHDRL------LAMLEEDPT---------LTPRDIIVMVADIDSY 418 + S + E V+ R+ L+M D + D+ V+ Sbjct: 805 LVIIEATSDRAEAVVVGKRIETLVGGLSMFSMDAGKVGSTQENEFSFADVAVLYRTRRQ- 863 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 +F +P+ ++D+ + +HP + +SLL L +D+ + Sbjct: 864 ----GKIFADVFQQAGIPFQMADKESLLNHPGIGELVSLLRLLKGGATFQDLF------L 913 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 + F G R + PA Sbjct: 914 VFNHFKAG-----------AGKGTRQKLGQWFRESELSPA-------------------- 942 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 E P+ IAE + +A +M L +GL L+ Sbjct: 943 -GAVELLGAAPFVHVRKDIAETLLGVARKIMALGQTVQGLGACDCLD-----LLASKADL 996 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 + E + + LG +S + L L+ + S A Sbjct: 997 YPLIKSDETS--------CRVFDRLLGDARNRDDDISCFLESL--SLENDSESLWPSAEK 1046 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 V + T+ + + + VV + G G+ P + D++R LF Sbjct: 1047 VTLMTMHGAKGLEYPVVFVTGCEPGLIPFAFPGR------------EPEDIDEERRLFYV 1094 Query: 719 ALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQ 757 A+ A+ L ++Y + R PS + ++ + + Sbjct: 1095 AMTRARDILCLTYSTKRRIYGITRQTGPSTFLLDIEAALKE 1135 >UniRef50_A6GG96 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GG96_9DELT Length = 693 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 46/374 (12%), Positives = 107/374 (28%), Gaps = 60/374 (16%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E + + D++ ++ E P+ V+ +AV + LP+ + + Sbjct: 331 EAKWVADKIYQLIHE-RGARPKHCAVLYRSSRQ----ARAV-EQNLQEHGLPFRMLGGQP 384 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 ++ + L L V LD P I + + + W R Sbjct: 385 FYDKKTVKDATAYLKLLVMPSDDIAVRRALDTPA----KGIGRKTVERMSHWAEVHQKR- 439 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 ++ E G+ + L Sbjct: 440 --------------------------------------LVDAIYHAKEIEGITGRPLESL 461 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDM-LNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 QL + ++ + ++ L L + + A + Q ++ Sbjct: 462 ERFHNQLRHAQIAASRGSVKDALRGFLDNVRLRDSVLKETGSGEATKVRWDSVQFLLDSV 521 Query: 624 LGAQYGD--AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 + D L +++ + + + T + + + V ++G+ Sbjct: 522 GRFEERAWNQKGKPRWSDYLGNLDLKKKDEDEAVPDAITLSTFHSSKGLEWSQVFIIGVE 581 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 +G P + GD +++R LF + A+ +L+++ + E Sbjct: 582 EGTLPHKRTDAP---RLSDAIAGD---LEEERRLFYVGITRARDRLWMTRAATRVDRGRE 635 Query: 742 RF--PSVLVQELID 753 PS + EL + Sbjct: 636 LEIKPSRFLDELPE 649 >UniRef50_B0MU18 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B0MU18_9BACT Length = 813 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 63/491 (12%), Positives = 146/491 (29%), Gaps = 79/491 (16%) Query: 326 FVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLD--SSITFHVCHSP 382 F P+ ++ ++ + A IE S+ K+ D I ++ Sbjct: 273 FKKDFPNAMIFKLEQNYRSTRTIVEAANSVIERNSKRMEKKCFSEGDMGEKIRVLRAYTD 332 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + E E++ L + + ++ + A + +PY I Sbjct: 333 REEAEMVVSDLRDKVRAAGD-EWAEAAILYRTNNQSQAL-----EDALRRKGIPYRIYKG 386 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + H ++ ++ + L + E +++ P I + + + Sbjct: 387 NSFYDHKEIKDLLAYIRLVINPRDDEAFKRIVNYPA----RGIGDTTVERI--------- 433 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 L A W ++ + + +V Sbjct: 434 ----------ALLAKARNLSMWEA-----------------VDALTAEPVTDPVQKTIVR 466 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVC---RDMLNAFFLPD-AETEAAMTLIEQQWQA 618 +A + L E+ L + ++ A+ + E +A+ IE+ + Sbjct: 467 KVAEFV-ALVRGLSLARAEKGLYDLGLEIATRSGIIGAYRAENTPEATSALDNIEELLNS 525 Query: 619 II------AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG--PVNICTLMPMRSI 670 + + A + + + L + + + V + T+ + + Sbjct: 526 MQLFNEQREAEIRAGERQQEERATIEEWLQGVMLMTDMDKDDPQDRNKVTLMTVHSAKGL 585 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 +K V ++G+ + ++P Q A +++R LF AL A++ +S Sbjct: 586 EYKFVYIVGLEENLFPSQRAVES------------PDGFEEERRLFYVALTRAKELATLS 633 Query: 731 YIGRSIQDN--SERFPSVLVQEL-IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 Y + PS ++E+ Y+ E + + L L R Sbjct: 634 YAEMRFKWGNMEFSRPSCFLREIDSRYLETDAMQEEREPVRRSAGRGEGSSALDELRRR- 692 Query: 788 PFDPQNYQPGE 798 FD + Q Sbjct: 693 -FDYRYQQKPA 702 >UniRef50_D1R4U3 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4U3_9CHLA Length = 677 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 60/395 (15%), Positives = 116/395 (29%), Gaps = 61/395 (15%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I S + E E + R+ M E L RDI ++ S + +F A + Sbjct: 319 IEVFHAPSDKEEAEAVVYRIAHM-REKYQLKWRDIAILYR-----SNALSRLFELALMNY 372 Query: 434 ----------YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 +PY I + + L + + E +L +++ P R Sbjct: 373 AWKDGDQWIKGIPYEIFGGTEFYERREVRDLFAYLRVIANPLDQEALLRIINQP----RR 428 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 I E L + + + L + + R A++ Sbjct: 429 GIGEASLDAATAY----------NRSHQLPL------WNVLKSLANR---EPAVQEVSSH 469 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 W D G I L + L + + D + + + D Sbjct: 470 WSQKA-LDSLQGFIGILENSKQRFEQDFSYALTELIEA---VNYKKAINDEVKSAQMRDF 525 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD-QERISQRFLAGPVNIC 662 + E + + E ++ L + D + VN+ Sbjct: 526 KWENVQEFVSSLVE--FNESFLKEFNKTPTLHDFITSTPLQQDWNQSQKNTQQKDQVNLM 583 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 T + + FK L+G+ D + P + + + +++R L + Sbjct: 584 TFHSSKGLEFKACFLVGIEDHIIPHEKSLKEVGV-------------EEERRLMYVGITR 630 Query: 723 AQQKLYISYIGRSIQDNSER--FPSVLVQELIDYI 755 A+Q L IS + + E PS + E+ + Sbjct: 631 ARQFLTISMARKRKRMGKEYASKPSRFLHEIPKEL 665 >UniRef50_C8V6U5 DNA helicase and DNA-dependent ATPase (Eurofung) n=3 Tax=Trichocomaceae RepID=C8V6U5_EMENI Length = 997 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 61/383 (15%), Positives = 127/383 (33%), Gaps = 53/383 (13%) Query: 380 HSPQREVEVLHDRLLA-MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 S + E + L + ++ L D +++ + + + SA +PY Sbjct: 324 PSAEDEAQWLVLEIKRCIVLTGKLLKYSDFAILLRS----ASLSRQI-ESAMGKHGVPYR 378 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 + + ++ + L + SE +L +++VP I EE ++ L Sbjct: 379 MVGGQRFFDRVEVKLLLDYLRVISHPENSEALLRIINVP----SRKIGEETVKMLLNGAE 434 Query: 499 ESG---IRWGIDDDNVRELELPATGQHTWRFGLTRM--LLGYAMESAQGEWQSVLPYDES 553 ++G + D R A + T GL+ + L+ Y+ E + P Sbjct: 435 KAGKPLWDYIKDVAQGRRSTEKAMSKPT-NQGLSSLVGLIEYSREKLRQCVDRSAP---- 489 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPL--EEWLPVCRDMLNAFFLPDAETEAAMTL 611 L ++M+ +R + E ++++ A E+ Sbjct: 490 --------RRLLEIVMKRLSFREFITATYGSNDENRWANVEELMSQADDATAADESEQD- 540 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP----VNICTLMPM 667 + I + LS +A + + + V I T+ Sbjct: 541 --ENLPEIAGLTQQESHPGEEALSRFLANVALSTEVQPKEETEGEDQAQEKVTISTIHAA 598 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + + VV + +G+ P A D++R L A+ AQ L Sbjct: 599 KGLEWPVVFIPAAYEGIIPHSRAEDS----------------DEERRLLYVAMTRAQALL 642 Query: 728 YISYIGRSIQDNSERFPSVLVQE 750 Y+SY R ++N+E + + + Sbjct: 643 YLSYPLRQARENAETNVTSFLPQ 665 >UniRef50_C8WP33 UvrD/REP helicase n=3 Tax=Coriobacteriaceae RepID=C8WP33_EGGLE Length = 813 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 58/425 (13%), Positives = 131/425 (30%), Gaps = 52/425 (12%) Query: 359 SRSDNKRPLDPLD-SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 R K D I ++ + E + + + L+ + V Sbjct: 301 HRKAKKLFTSAEDGDKIQVYMAADERDEGRWIAGEIEK--QRAAGLSYNQVAV------F 352 Query: 418 YSPFIQAV-FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y Q+ +PY I + ++ L+L + +++V Sbjct: 353 YRTNAQSRMLEDMLLRAGVPYRIVGGTRFFDRAEIRDVMAYLTLVVNPADDIAAKRVINV 412 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM--LLG 534 P R I + + + Q+ E G+ + + + + + R + L+ Sbjct: 413 P----RRGIGKTTIERIEQFAREMGMTF---MEGAELAIVDPELRASARQAIGEFVGLVN 465 Query: 535 YAMESAQGEWQSVLPYDESSGLIAEL-VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD 593 A + + + SGLI L + ++ + L E D Sbjct: 466 EARTYGGDLRKVIETIIDKSGLIGALQAENTDEARGRIENIQEFLGVVDEFTETHED-ED 524 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV---------------PLSLLR 638 L + A+ + A+ + + L+ Sbjct: 525 ALYEAPTAEPADAPALAPVPSSADALAGSFYAFAGANELAAPAEESPVRVLRGDSLADFI 584 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 + + R D + +++ V + T+ + + F V + GM + ++P + Sbjct: 585 EWVRLRTDLDTVAE--DGHAVTMMTVHSSKGLEFDCVFVAGMEETLFPHMNS-------- 634 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIG 756 GD + +++R L A+ A++KL+++ S +QE+ + Sbjct: 635 ----VGDAAGIEEERRLAYVAITRARKKLFLTCAYARQIFGQTSSNPISRFIQEIPSELR 690 Query: 757 QSHYL 761 Q+ L Sbjct: 691 QTTGL 695 >UniRef50_UPI0001BC375D ATP-dependent DNA helicase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC375D Length = 648 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 61/476 (12%), Positives = 158/476 (33%), Gaps = 112/476 (23%) Query: 305 KLGRDYIYLLSDLESS--------QELDAFVDVTPDNLLH------NIQSDILELENRAV 350 K+ D I +L++ E + Q + F P+ +L+ + IL++ R+ Sbjct: 252 KVQYDVIRMLAEPERNIFIVGDDDQSIYGFRGSRPEIMLNFEKDYPEAEKIILDINYRST 311 Query: 351 AGVNIE--------EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE--D 400 + + + N + + ++ E +DR++ ++ D Sbjct: 312 SNIVDASGYVIRNNKVRFDKNIHTDNEKGDKVDIIETNNINEE----YDRIVKIIRSFVD 367 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI-SDRRARQSHPVLEAFISLLS 459 D V+ + +P ++ + +P+ + H + + ++ ++ Sbjct: 368 AGKQYADFAVLFRTNVTAAPLVRK-----FMENNIPFVLRDGIPNIFEHWIAKDILTYMT 422 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 L + D + +++ P+ R +V +S + D+ E P Sbjct: 423 LAEGGRKRADFIRIMNKPLRYIG-----------RDYVTDSEV--SFDELEKYYEEKP-- 467 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 + + R + ++ ++ Sbjct: 468 ------WMINR-------------------------------------IRKMERELNAMS 484 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 + + R + + E ++ Q+ I+ E + + + R+ Sbjct: 485 -DMTCYAMINYLRKGV-GYDDYVKEYAKNHSIEPQELSDILDEIMESSKD-FIKFDDWRE 541 Query: 640 ELAQRLDQERISQ--RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 + + ++ + + R L V + T+ + + + V ++ N+G+ P + A L D+ Sbjct: 542 YIEKYTEELKENHTKRDLKDYVTMTTMHSSKGLEYDTVFIIDANEGITPHKKAVLDADI- 600 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 +++R +F A+ A++KLYI + N S V E+++ Sbjct: 601 ------------EEERRMFYVAMTRAKKKLYIFCPK--ERYNKSLETSRFVNEIMN 642 >UniRef50_D2R6Z4 UvrD/REP helicase n=4 Tax=Planctomycetaceae RepID=D2R6Z4_9PLAN Length = 669 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 66/400 (16%), Positives = 127/400 (31%), Gaps = 48/400 (12%) Query: 375 TFHVCHSPQREV-EVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 S E +V+ D + +D T PRD ++ + + Sbjct: 315 RIEQYPSEVEEARQVVADIAFRL--KDGTRDPRDFAILFRTNEQ-----PRAIETELRKA 367 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 LPY + ++ + ++ L +S +L +++ P I E + Sbjct: 368 KLPYVMLGSQSFFDRKEVRDLLAYLRAIESPRDEVSMLRIINTPP----RGIGERSVET- 422 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 V +R G +V L G A ++ ++V Sbjct: 423 ---VLSEAVRSGKTVWDVVSNLSEGPT-----------LFGDAEKTTTLSDKNVAAIRSF 468 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 S LI A L R L E E+ + PD E + Sbjct: 469 SNLIQRYSEATARG-DSLAELTRKLISETGYEQEVRRIY--------PDPEEQQMRLAAV 519 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 ++ +A + ++ L + L QR + ++ + + TL + + F Sbjct: 520 EEVVNSVAAYEAEEEKPSISGYLDQVTLGQREMGDDKEKQLARNAIALMTLHASKGLEFP 579 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 V ++G+ DG+ P + K + + D++R L + AQ++L +S Sbjct: 580 HVYMIGLEDGILPHSRSV----------KADSQDQIDEERRLCYVGITRAQERLTLSLAL 629 Query: 734 RSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDE 771 ++ R PS + E+I H G + Sbjct: 630 TRMKWGKPRDTTPSRFLFEIIGQADNPHSRGGTRPRSSSR 669 >UniRef50_C6NTI8 ATP-dependent DNA helicase UvrD/PcrA n=2 Tax=Gammaproteobacteria RepID=C6NTI8_9GAMM Length = 729 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 68/445 (15%), Positives = 137/445 (30%), Gaps = 72/445 (16%) Query: 326 FVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLDSS--ITFHVCHSP 382 F + P L ++ + A A I + K D + + ++ Sbjct: 275 FAEDFPGAALVRLEQNYRSSAPILAAANAVIAHNAERLGKTLWTAQDGGEPLELYAAYNE 334 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISD 441 + E + ++ + + D ++ Y Q+ VF +PY + Sbjct: 335 EDEARFVVAQIQQWVAQGG--RREDCAIL------YRSNAQSRVFEEILVREGVPYRVYG 386 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 ++ ++ L L +R ++++P I L LR Sbjct: 387 GLRFFERAEIKDVLAYLRLCRNRHDDASFERVVNLP----TRGIGNVTLERLR------- 435 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 L+ G W+ G A + GL AE+ Sbjct: 436 ------------LQAREQGLSLWQAA------GQAASPKLNAF-----LTLVDGLAAEIA 472 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 G +L+ + + + L +W D E A A + Sbjct: 473 G------DELDAAVQRVIEVTGLRDWYARDGDRNEGRLENLDELINAARAY-----AFVE 521 Query: 622 EGLGAQYGDAVPLSLLRDELA-QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 E + + P + L + L L+ + V + +L + + F VV L+G+ Sbjct: 522 EREALRELNPDPGNRLSEFLTHAALEAGEGASDAWEDAVQLMSLHSAKGLEFPVVFLVGL 581 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 +G++P Q + D ++ ++R L + A ++L + Y S Sbjct: 582 EEGLFPHQRSLEDADGLA------------EERRLCYVGMTRAMRRLVLCYAESRRLHGS 629 Query: 741 ER--FPSVLVQELIDYIGQSHYLPG 763 ER PS +++L + + Sbjct: 630 ERASLPSRFLRDLPSDLVRELRPRA 654 >UniRef50_C7PL50 UvrD/REP helicase n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PL50_CHIPD Length = 1066 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 87/660 (13%), Positives = 193/660 (29%), Gaps = 114/660 (17%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 I N + E + P + ++ + E+ + ++ +L + Sbjct: 352 IANNGNSRLVNQLPELDKQLIAAIPAAQSPVPV-IRRYNTSRDEMTDITQQIARLL--EK 408 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL- 460 + P I V+ + + Y + + LP+ P +S+L Sbjct: 409 GIAPGRIAVIYRE-NKYGEEL----ARYCRQQQLPFYSKRSINLFEVPFARKVLSILRYL 463 Query: 461 ---PDSRFVSEDV-LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 D+ + +D+ ++L ++I + + E G R E Sbjct: 464 ACEVDTPYSGDDLLFSILHYDF----YNIPAIEVAKISIRAAEKGYR-----------EK 508 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 + Q+ + TR L + Q ++++ +L Sbjct: 509 SSIRQYLQEWAHTRNLTLFTAAPEQALVD------------------FSAMMEKLIRDAH 550 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY-GDAVPLS 635 L ++ + C + A P+ + + QA+ + + ++ Sbjct: 551 NLTLQQLFAAVINECGVLSYAMQSPEKPW------LMKVLQALFDFVKEETHRNPDLTIA 604 Query: 636 LLRDELAQ-RLDQERISQRFLAG---PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 D + R + I ++G +N+ T + + F+ V + G N ++ ++ Sbjct: 605 PFMDMVDLMRHNGITIPLVQVSGNETGINLLTAHGAKGLEFEYVFIAGANAYLWEEKVKN 664 Query: 692 LGFDLMSQKPKRGDRSRRDDD--RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 + D+ R LF A+ A++ LYISY D PS+ V Sbjct: 665 GSGFSFPDTLFTTTLTSTDEQELRRLFYVAITRAEKHLYISYPEYR-TDGKPLEPSLFVT 723 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 E++D H P + + +A Sbjct: 724 EILD-----------------------------QHQL-PVEKVIIPEEVQFRFAALDYTP 753 Query: 810 ASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 A ++ + + L + P+ +++ ++V +E Sbjct: 754 ELAPEIAKTDQPLIDNLLANFVMNVTALNNYLDCPLGFYYKNLVRVPSGR-------SEN 806 Query: 870 FILEGLSRYQINQQLLNALVEQD----DAERLFR-----RFRAAGDLPYGAFGEIFWETQ 920 Y + + L E R R +F E E Sbjct: 807 TEFGSAVHYALEKLFLKMQESGRYEFPSKEEFIRDFTWSMLRNRESFTRESF-ERRLEYG 865 Query: 921 CQEMQQLADRVIACRQPGQSMEIDLAC---NGVQITGWLPQVQPDG----LLRWRPSLLS 973 + D + S+E ++ NGV + G + +++ DG ++ ++ Sbjct: 866 RDILDHYYDTWLPHWNKVVSVERNIRSVVVNGVPLKGKIDKLEFDGNLVNVVDYKTGDYE 925 >UniRef50_C3JBX6 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=C3JBX6_9PORP Length = 809 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 71/452 (15%), Positives = 146/452 (32%), Gaps = 79/452 (17%) Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 L + SSQ + A + ++ +H I+ D+ + Sbjct: 281 LFKLEENYRSSQRIVALANSLIEHNVHRIKKDVFSNRAKGEK------------------ 322 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGS 428 I + S RE + + + + + + ++ Y Q+ +F Sbjct: 323 ----IDLYEMESGYREAQHVVESIYKRYCKHSETSYGSFAIL------YRTNAQSRLFED 372 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 +PY I A S ++ ++ L L + +E P R I ++ Sbjct: 373 QLRQAGIPYRIYGGIAFYSRAEIKNVLAYLQLIANPHNNEAFERAAKYP----RKGIGDK 428 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L +R + + + + P T T R LT L L Sbjct: 429 TLSLIR--TEAADNKTSLFAAAESLIARPDTLSSTARTKLTAYL--------------EL 472 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 D + A+ + ++ + L + +E + + +N F E E Sbjct: 473 IRDITYNPEAKTLVEWVQSILLRSQILDTLRADTSIEGHTQL--ENVNEFVSGVQEFE-- 528 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR--LDQERISQRFLAGPVNICTLMP 666 A+GL + G+ L L Q L + + A V++ T+ Sbjct: 529 --------DETSADGLFFERGETTSLHDLLVLFLQGVTLITDNLETGENADAVHLMTIHA 580 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F V ++G+ +G++P L+ +++R L A+ A++ Sbjct: 581 AKGLEFDHVYIVGLEEGLFPSMLSAE-------------EENIEEERRLLYVAITRAKEY 627 Query: 727 LYISYIGRSIQDN--SERFPSVLVQEL-IDYI 755 IS+ + PS +++L + Y+ Sbjct: 628 CSISFARYRAINGMTEYMIPSRFLRDLDMRYL 659 >UniRef50_UPI00016B20E8 ATP-dependent DNA helicase PcrA n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20E8 Length = 702 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 49/380 (12%), Positives = 106/380 (27%), Gaps = 77/380 (20%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA-DIDSYSPFIQAVFGSAPAD 432 + + + E + + + +E D ++ + SY A Sbjct: 318 VEVYSALDDKSEAAWIANVISNKVESGE-YNFDDFAILYRTNSQSY------TIEQALNQ 370 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 R +P I V++ ++ + L + + +VP + L Sbjct: 371 RSIPLNIVGGTRFFDRAVIKDIMAYVRLCYQPNDMSSFMRIANVP----SRGVGPTSLAK 426 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 W ++ ++ E Sbjct: 427 FISWQGQT---------------------------------------EMDIISALKQSGE 447 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETEAAMT 610 ++ + A L L +L I R + + L D + L + Sbjct: 448 ATTITARARNALQELGCKLQIIRSEILNNTAPSDILEKVIDKTGYRDYILDGSPQAEDNN 507 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 ++ P + + L + + G V + TL + + Sbjct: 508 EYLNTLI-----------DESRPYADIETYLEEVSLMSSSDLQSEKGYVTLMTLHAAKGL 556 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 F VV + GM +G+ P G+ +++R L + A+++LY+S Sbjct: 557 EFPVVFMSGMEEGILPHSRTLD-----------GNPDDLEEERRLCYVGMTRARERLYLS 605 Query: 731 YIGRSIQDNSERF--PSVLV 748 + Q N ++ PS + Sbjct: 606 HSASRYQFNQRKYNDPSRFL 625 >UniRef50_Q3A0S9 ATP-dependent DNA helicase PcrA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0S9_PELCD Length = 737 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 58/390 (14%), Positives = 113/390 (28%), Gaps = 63/390 (16%) Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISD 441 E + + + D RD+ V Y Q+ V LPY + Sbjct: 323 LEEARFVAAEIARL--RDAGRHLRDVAV------FYRTNAQSRVLEETLVREGLPYVMVG 374 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 + ++ ++ L + S +++VP I + + E+G Sbjct: 375 GVKFYARMEIKDVLAYLRALANPADSLSARRIVNVP----SRGIGAVTTGRIAEHEEEAG 430 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 G L R +L A + + + Sbjct: 431 ---GFLAACRL--------------CLERGVLKGAAAKKVAAFSAFMERFAQRMTEV--- 470 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 L L L + + + E + + +EQ + Sbjct: 471 -PFPQLTADL------LEESGYAPNLREEAQSAMTE--GERKEAKGRLENLEQLLAGMEE 521 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 L +++A D + R V + TL + + F VV + GM Sbjct: 522 HQATES-----SLQEYLEQVALVTDLDSYDTRL--DRVTLMTLHAAKGLEFPVVFMTGME 574 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 +G++P A G+R +++R L + A QKLY+++ R Sbjct: 575 EGIFPHGRAA------------GERDDVEEERRLCYVGMTRAMQKLYLTHARRRRIYGDY 622 Query: 742 RF--PSVLVQELIDYIGQSHYLPGDEALNC 769 ++ PS + E+ ++ P + Sbjct: 623 QYNAPSRFLAEIPPHLMGDKPAPALQKPAT 652 >UniRef50_Q72IS0 DNA helicase uvrD n=3 Tax=Thermus thermophilus RepID=Q72IS0_THET2 Length = 692 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 57/401 (14%), Positives = 118/401 (29%), Gaps = 82/401 (20%) Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 RP+ + + + E + + + + V+ Sbjct: 302 LRLEKALRPVKRGGEPVRLYRAEDAREEARFVAEEIARL-----GPPWDRYAVL------ 350 Query: 418 YSPFIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y Q+ + A A R +P + ++ ++ L + + + +L+ Sbjct: 351 YRTNAQSRLLEQALAGRGIPARVVGGVGFFERAEVKDLLAYARLALNPLDAVSLKRVLNT 410 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P GI G +L G W A Sbjct: 411 PP---------------------RGI--GPATWARVQLLAQEKGLPPWE----------A 437 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 ++ A + P L + + + + R +L Sbjct: 438 LKEAARTFPRPEP--------------LRHFVALVEELQDLVFGPA-----EAFFRHLLE 478 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 A P EA E + + + A+ +A L D L + Sbjct: 479 ATDYPAYLREAYPEDAEDRLENVEELLRAAK--EAEDLQDFLD--RVALTAKAEEPAEAE 534 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 G V + TL + + F VV L+G+ +G+ P + + + + +++R LF Sbjct: 535 GRVALMTLHNAKGLEFPVVFLVGVEEGLLPHRNSVSTLEGL------------EEERRLF 582 Query: 717 LEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYI 755 + AQ++LY+S+ PS ++E+ + + Sbjct: 583 YVGITRAQERLYLSHAEEREVYGRREPARPSRFLEEVEEGL 623 >UniRef50_A1AVZ1 UvrD/REP helicase n=3 Tax=Gammaproteobacteria RepID=A1AVZ1_RUTMC Length = 718 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 50/412 (12%), Positives = 122/412 (29%), Gaps = 77/412 (18%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 I + + E + + ++ +P D ++ Y Q+ +F A Sbjct: 319 IDVYEARTETDEANYVISNIQKLITN--GASPSDCSIL------YRFNAQSRIFEEALIK 370 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY I + ++ +S L L ++ + +++ P I ++ Sbjct: 371 YNIPYIIYGGLKFFEYTEIKDALSYLRLIENSADNVAFERVVNFP----TRGIGNVTVKK 426 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 +R +A ++ +Q+ + Sbjct: 427 IR---------------------------------------TFAQDNHTSLFQAAIQISS 447 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 A L+S + + ++LN L + + Sbjct: 448 ILPTRA--ANALSSFINLIKQITDDTKHL----NLSEKVTNLLNTSGLIMHYSNDKIGSK 501 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDEL-AQRLDQERISQRFLAGPVNICTLMPMRSIP 671 ++ + +I + +S + + LD + + V + T+ + + Sbjct: 502 KENLKKLITITKQYNHEQDNKMSEVMGFISLTSLDSSGNTNASINQNVQLMTIHSAKGLE 561 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F V L+GM + ++P + + L D++R L + A +KL +SY Sbjct: 562 FPCVFLVGMEEDLFPSRQSKNEPHL------------TDEERRLCYVGMTRAMKKLSLSY 609 Query: 732 IGRSIQDNSER--FPSVLVQEL----IDYIGQSHYLPGDEALNCDESEARVK 777 + +PS + E+ ++ I + + + Sbjct: 610 AIKRFLYGQSLYAYPSRFLNEIPSKYLNKIKAKFGATIQNYNDDNTFNKNIT 661 >UniRef50_B2A5W4 UvrD/REP helicase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A5W4_NATTJ Length = 726 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 51/415 (12%), Positives = 111/415 (26%), Gaps = 74/415 (17%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 A + +K D + ++ + E + + + A Sbjct: 282 LEAANQVVTNNPSRKSKELWTDNDEGYPLQYYEADDERDEAYFIAEEIRA-----NRYQL 336 Query: 406 RDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 I V+ Y Q+ V + Y + ++ ++ L + Sbjct: 337 PLIAVL------YRTNAQSRVLEDIFRKMGISYEVVGGTGFYDRKEVKDIMAYLMVVQCP 390 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + +++ P + I + + L+ + N + I T Sbjct: 391 QSDSQLERIINEP----KRGIGKTSVDKLKDYANRNNI--------------------TL 426 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 L + Y + S V ++ R L + Sbjct: 427 FDAL-----------------LEVDYTDISKRGKNSVKKFTDMIGNFRKMREYLTVRELI 469 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 EE L A + + ++ ++ E L + Sbjct: 470 EEVAEK-SGYLEALRSQNTKEAETRMENVREIYSMAKEFEAEGGE---TLQEFLTH-STL 524 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 + + V + TL + + F V L G+ +GV+P M Sbjct: 525 MGDIDTWEDEEQAQVVMMTLHSAKGLEFPGVFLTGLEEGVFPHIRTYDSEASM------- 577 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQ 757 +++R L + A+Q LY+++ + PS V E+ + + Sbjct: 578 -----EEERRLCYVGITRAEQVLYLTWARERTLNGMTRMLQPSRFVSEIGEDLKD 627 >UniRef50_B3QYS3 UvrD/REP helicase n=9 Tax=Chlorobiaceae RepID=B3QYS3_CHLT3 Length = 765 Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats. Identities = 47/381 (12%), Positives = 106/381 (27%), Gaps = 69/381 (18%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 +T +RE E + + + D + Y Q+ A Sbjct: 332 VTLFEATDERREAEKVAMAIRER-KLSSGNQNSDFAI------FYRTNAQSRALEDALRF 384 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 + Y + + ++ ++ L + E +L +++ P + E L+ Sbjct: 385 NGIAYRVFGGVSFYKRKEIKDIVAYLRFILNSRDEESLLRIINFPA----RGVGETSLKR 440 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L+ E G + + R + + Sbjct: 441 LKDIAIEEGF--------------------SLYEAICR-----------------ATHYD 463 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 + + L+ L + + E L +L + A Sbjct: 464 LQNRLISALNDFRMLIEDLREIAQQHTAYEVVAELLRK-TRLLEILKNENTAEANARYDN 522 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 Q++ + D L+ + L ++ + V + T+ + + F Sbjct: 523 LQEFLNFARQFCDKSAEDP-SLNAFLQ--SASLATDQDNADANGNQVTLMTIHAAKGLEF 579 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 VV + G+ + ++P ++ F AL A++KLY+S+ Sbjct: 580 PVVFVTGLEERLFPLNPDEPRELEEERRL--------------FYVALTRAEKKLYVSFA 625 Query: 733 GRSIQDNSERFP--SVLVQEL 751 + S ++EL Sbjct: 626 KSRYKFGQSFPAKRSRFIEEL 646 >UniRef50_C0R2D4 ATP-dependent DNA helicase n=4 Tax=Brachyspira RepID=C0R2D4_BRAHW Length = 659 Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats. Identities = 68/437 (15%), Positives = 139/437 (31%), Gaps = 67/437 (15%) Query: 326 FVDVTPDNLLHNIQSDIL---ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSP 382 F P+ + ++ + ++ A++ + N P + I +C+S Sbjct: 259 FEKDYPNTKIVRLEENYRCPKDIVEAALSVIKNNSNRHEKNVFSNKPNEFKIENWICYSD 318 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 E + + + ++ D RDI+V+ + + Y I Sbjct: 319 LEEARSVVNEIESLF--DNGFEARDIVVLFRTNSQSRAY-----EKELRLHSINYKIVGG 371 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 ++ IS L L + V ++VP I E+ + Sbjct: 372 VGFFERIEIKDSISFLRLMTGFGDNFSVRRTINVPP----RGIGEKSFNNFETF------ 421 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTR--MLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 N R+L L + GL++ +L A ++ E+ + D + + Sbjct: 422 ------ANSRKLTLYNAIDYIDESGLSKKAILNIKAYKNIIEEYAVKIKEDIINEDGIHI 475 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 L ++ + + F D E +T E + Sbjct: 476 ELLFFEFLKDIDYF----------------------SIFKGDG-NERVITAEENIKELFR 512 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 L + L ++ + V + T+ + + F VV + GM Sbjct: 513 GFYDYKSMEANATLITFLE--ENTLYRDLNTNDEKEDYVTLMTIHNAKGLEFDVVFMTGM 570 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI-GRSIQDN 739 GV+P S + ++G D++R L + A++KLY++Y R + Sbjct: 571 EQGVFPHY--------FSLEEEKG----IDEERRLCYVGITRARRKLYLTYSKKRRVSTG 618 Query: 740 -SERFPSVLVQELIDYI 755 E+ PS + E+ + Sbjct: 619 IMEQIPSSFLLEIPKKL 635 >UniRef50_C1YL28 DNA/RNA helicase, superfamily I n=2 Tax=Nocardiopsaceae RepID=C1YL28_NOCDA Length = 714 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 84/657 (12%), Positives = 186/657 (28%), Gaps = 89/657 (13%) Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 D + + S +E V+ D L D + D+ V+V P V A Sbjct: 3 DGEVRVLLADSAAQEAAVIADTLRRAHLVD-GVPWSDMAVLVRSSTRQLP----VLRRAL 57 Query: 431 ADRYLPYAI-SDRRARQSHPVLEAFISLLS--LPDSRFVSEDVLALLDVPV----LAARF 483 +P A+ +D + P++ ++L+ L + + LL P Sbjct: 58 TAASVPVAVGADDLPVAAEPIVRPMLALIRYGLAPAELDEDAARELLTSPFGEADTVRLR 117 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 + R ++ G G + + +R ++ Sbjct: 118 RLVRALRRLDLDRAHDGGAHGGAPEGDASREGAREERSGAYRPSAQLLV---------DA 168 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL--EEWLP--VCRDMLNAFF 599 + IA +A L + A + E W + +L A Sbjct: 169 LRDPAELTLVDPEIAAPATRVAQALRTVRDLNARGADAEQVLWELWRDSGLADRLLRASL 228 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERISQRFLAG- 657 AA ++ + + ++LA + + + +++R G Sbjct: 229 AGGRRGAAADRDLDAVVALFESAARYCDRLPPGSPAGFLEDLAAQEIPGDSLAERAPEGE 288 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF----DLMSQKPKRGDRS------ 707 V I T + + + +V + G +G +P +L+ D S Sbjct: 289 AVRILTAHRSKGLEWGLVVVAGAQEGDWPDLRLRGSLLGVEELVDTDVHSADSSGAALAS 348 Query: 708 -RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL-----------IDYI 755 D++R LF AL A++ L ++ +G D PS + E+ + ++ Sbjct: 349 KLLDEERRLFYVALTRARRTLVVTAVGGEDTDER---PSRFLNEMGVGEPEPVSTGLRWL 405 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 + ++ D H + + G R + EW Sbjct: 406 SLPSLVADLRSVVTDPGAPEPLREAAATHL-----ARLAEEGVRGADPAEWYAL-----T 455 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 ++ V ++ F +R + + S + Sbjct: 456 PFTDDRPLAEEEDTIRVSPSQVESFTNCQLRWLLERAAGASSGDSASAL----------- 504 Query: 876 SRYQINQQLLNALVEQDDAERLFRRF-RAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC 934 + + + + + + R DL +G + Q + +++ Sbjct: 505 --GTVVHAVAVLVAQGSTPDEISGRMDEIWADLDFGGPWQ--ARAQRDRADTMVRKLVDW 560 Query: 935 RQPGQSMEI------DLACNGVQITGWLPQVQPDGL-----LRWRPSLLSVAQGMQL 980 + + G++ITG + +++ D + + + Sbjct: 561 EAANDRELVVTEEGFRVDVGGIEITGRVDRLERDDQGRAVVVDIKTGKNKADDLARH 617 >UniRef50_C9LD15 ATP-dependent DNA helicase PcrA n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LD15_9BACT Length = 794 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 51/388 (13%), Positives = 117/388 (30%), Gaps = 74/388 (19%) Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAP 430 + ++ + E + + L ++ + ++ Y Q+ F A Sbjct: 319 DKVCIISAYTDKDESAKVVKEIFK-LRRQHHISLDQVAIL------YRTNAQSRAFEDAL 371 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 + LPY + + ++ I+ + + E +L +++ P I + + Sbjct: 372 RNAALPYRVYGGLSFYQRKEIKDIIAYCRVVCNPQDEEALLRIVNYP----TRGIGQTTM 427 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 L A + + W +L Sbjct: 428 SKLIAA---------------------------------------ARGNGEPLWSVLLAP 448 Query: 551 DESS-GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA---FFLPDAETE 606 D+ L + L + + ++ + + ++L A + Sbjct: 449 DKFGVALNRRTLEKLYAFAELIRSFQARAD----VMGVYDLVSELLEASGITQELQGDRT 504 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL-AQRLDQERISQRFLAGPVNICTLM 665 + Q ++ G + + LL D L L ++ Q V + T+ Sbjct: 505 PEGLSKWENIQELLNSIKGFESEQETGVVLLADYLPQVVLLTDQDQQDDDEPKVTLMTVH 564 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + F+ V + G+ DG++P A +++R LF A+ A+ Sbjct: 565 AAKGLEFEAVFVTGLEDGLFPGTAAKYSA------------RELEEERRLFYVAVTRAKA 612 Query: 726 KLYISYIGRSIQDNSER--FPSVLVQEL 751 +I+Y PS+ +QE+ Sbjct: 613 HCFITYAKTRYIYGRLEFCEPSLFLQEI 640 >UniRef50_A6CC22 ATP-dependent DNA helicase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CC22_9PLAN Length = 755 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 67/473 (14%), Positives = 143/473 (30%), Gaps = 67/473 (14%) Query: 326 FVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLDSS--ITFHVCHSP 382 F PD ++ + + VA I R K + + Sbjct: 266 FERDFPDCKTIRLEQNFRSTKEILRVADDLISHNQRRKVKSLFTENEEGSPVELLCFQDE 325 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + E + + R+ +++ D + + A A +PY ++ Sbjct: 326 RHEADDIARRIRNAVDQGKQ-EYTDYAIFYR-----VNSLSRELELALARHKIPYQLAGS 379 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 A ++ +S L L ++ +++ P+ I + L +W +E GI Sbjct: 380 VAFYERTEVKDLLSYLKLVNNPDDRVAFSRIVNKPL----RGIGKTTQNKLIRWADERGI 435 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 + + T +M+ G++M + G Sbjct: 436 SLLEAAHQAADCPKLSKRAATMVARFAKMINGFSMADS---------------------G 474 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 +A L+ + + R ++ W PD + + + + Sbjct: 475 SVAHLMENI------IDSTRMVDSWKE----------SPDEADQQRIANVNELLSTAKKY 518 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 YG+ L + L AG V + TL + + + VV ++G+ Sbjct: 519 --DDIYGEETTLEGFLEV--STLASATDQLDTDAGRVTLMTLHAAKGLEYPVVFIVGVEQ 574 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 + P + + R +++R LF + A+Q LY++ Sbjct: 575 NLIPHERV----------LREEFRDGLEEERRLFFVGITRAEQNLYLTQTRERSMRGRPW 624 Query: 743 F--PSVLVQEL-IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ 792 S ++E+ +++ QS + + DE VK +P+ Sbjct: 625 RTITSDFLKEIDVEFNDQSTDELFESRSHFDEFVESVKRGEIDTAALKAANPE 677 >UniRef50_B6QHN1 ATP-depentend DNA helicase, putative n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QHN1_PENMQ Length = 1006 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 60/425 (14%), Positives = 122/425 (28%), Gaps = 47/425 (11%) Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 L D +++ + + + S + +PY + + + L + Sbjct: 346 LKSSDFAILLRS----AALSRQI-ESELGKQGIPYRMVGGSRFFDRVEIRLLLDYLRVIS 400 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR-WGIDDDNVRELELPATGQ 521 ++ + +++VP I +E L+ L + + W D + G Sbjct: 401 HPENNDALARIINVP----TRKIGDETLKSLTAGAESANLPLWTFIKDVAQGRRSCQKGL 456 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 +L+G S Q + L ++ +R L Sbjct: 457 SKAANIGLSVLVGLIEASRQKLHDCI---------DESSPRVLLEFVISKLGFREYLTAT 507 Query: 582 RPLEE---WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 PL+E W + ++ + + + I + LS Sbjct: 508 YPLDEENRWAN-----VEELLAQAGDSSTSYSQQDDILPEIEGLEQHQGHIGEEALSRFL 562 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 +A + V I T+ + + + VV + + +G+ P A Sbjct: 563 ANVALSTEVTTEEGDQPQEKVTISTIHAAKGLEWPVVFVAAVYEGIIPHSRAEDS----- 617 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 D++R L A+ AQ LY+S R ++ E S L I ++ Sbjct: 618 -----------DEERRLLYVAMTRAQALLYLSLPRRDSKNGEETRTSSF---LPPSIVEA 663 Query: 759 HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHS 818 + L D++ + L H + Q W P G + Sbjct: 664 KFRAIGPKL-VDKTIFAIADILGREHPSQEAIVKGLQARLPSLNDDLWTPDGDYTGDTAT 722 Query: 819 EFVQP 823 + Sbjct: 723 RWDGS 727 >UniRef50_Q7UIR9 ATP-dependent DNA helicase n=2 Tax=Planctomycetaceae RepID=Q7UIR9_RHOBA Length = 787 Score = 102 bits (254), Expect = 9e-20, Method: Composition-based stats. Identities = 56/400 (14%), Positives = 122/400 (30%), Gaps = 66/400 (16%) Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + N +P ++T +E + + D + + PRD +M ++ Sbjct: 297 RRRKQKNLFTDNPTGEAVTLRQYEDGYKEADGIADEIANQMIAG-NAEPRDFAIMCR-MN 354 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + + I+ A +R +PY I + ++ ++ L L ++ +++ Sbjct: 355 ALTRSIE----HALRNRGIPYQIVNGLEFYQRKEIKDLLAYLHLINNPRHDVAFQRVINT 410 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P I + L ++++ ++ I Sbjct: 411 P----TRGIGAKTLERIQRFADDHRI---------------------------------P 433 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 M A + + + LV L +L + LE+ L + + Sbjct: 434 MLEAARRVDEIDTLSKRAKT---LVTSFIRLYDRLC-----IKATATLEDLLRFLIEEIK 485 Query: 597 AFFLPDAET-EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 + T E I+ + SL L + + Sbjct: 486 FVAYLERTTPEQQDNNPIANVDEFISAAVEFDQMHPEDGSLEAFLEQVALVSDTDAFEDS 545 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 V + TL + + F V ++ + D + P + + D ++ +++R L Sbjct: 546 NNRVTLMTLHAAKGLEFPRVFIIAVEDNLLPHRRSKE------------DETQLEEERRL 593 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELID 753 + A+Q L ISY + PS+ + EL Sbjct: 594 LFVGVTRAEQWLQISYAKLRSFRGENQPAIPSMFLGELPR 633 >UniRef50_A2QP78 Contig An07c0280, complete genome n=8 Tax=Trichocomaceae RepID=A2QP78_ASPNC Length = 1003 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 62/438 (14%), Positives = 120/438 (27%), Gaps = 48/438 (10%) Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 D +++ + + + + +PY + ++ + L + Sbjct: 347 YSDFAILLRS----AALSRQI-EAQMGKHGIPYRMVGGLRFFDRVEIKLLLDYLRVISQP 401 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 ++ +L +++VP + +E + L + G + + Sbjct: 402 GNTDALLRIINVP----SRKLGDESVNLLTK---------GAEKAKKPLWDFIKDVA-QG 447 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDES--SGLIAELVGHLASLL---MQLNIWRRGLA 579 R + L A + + L L + + + L Sbjct: 448 RSSTEKSLSKPADNGLCTLVGLIESARQKLCECTDGSSPRKLLDFLIKKLSFREYLKALH 507 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 W V + A P E EA + Q + + Sbjct: 508 GSNEENRWANVEELLTQADDTPGPENEAENDENLPEIQGLEQQQAHPGEEALSRFLANVA 567 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 + L QE V I T+ + + + VV + + +G+ P A Sbjct: 568 LSTEVLPQEGEEGEQSDEKVTISTIHAAKGLEWPVVFVPAVLNGIIPHSRAEDS------ 621 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE-----RFPSVLVQELIDY 754 D++R L A+ AQ LY+SY R +D E PS LV+E + Sbjct: 622 ----------DEERRLLYVAMTRAQALLYLSYPLRQSRDGEEATLSSFLPSKLVEERFRF 671 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRM---PFDPQNYQPGERQSYAREWLPAAS 811 +G + + + P+D Q + G A Sbjct: 672 LGPKINDKIIQEIADILRRPMPGSAAISEGRSTCDIPYDDQWTEDGFEAPDAIIRWDGTR 731 Query: 812 QAGKAHSEFVQPLPFTLP 829 G + Q L Sbjct: 732 AMGGEPNPKRQRLNQEQS 749 >UniRef50_Q0F272 ATP-dependent DNA helicase Rep n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F272_9PROT Length = 652 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 58/413 (14%), Positives = 123/413 (29%), Gaps = 83/413 (20%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS----- 428 I +P+ E L + + D+Y +A F S Sbjct: 307 IRVWGSPNPEEEARRLAGDIKSHHARSGG-----------QWDAYCVLYRASFQSRSIEL 355 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A + +PY +S + ++ ++ L L F + Sbjct: 356 ALREAGIPYHVSGGMSFFDRAEIQDILAYLRLIA-NFS---------------------D 393 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L ++R + R GI + +L +AM ++ L Sbjct: 394 DLAFMRAI---ARPRRGIGSKALGDLGF------------------FAMAEDCSLLEACL 432 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR-DMLNAFFLPDAETEA 607 L + L + P + + V L A +A+ + Sbjct: 433 K----EELDHKRAEALREFGDMIVGLEHQFRHGEPDDAFDAVLDLTRLEAAIRAEADDQE 488 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + + L+ + +++ +G V + T+ Sbjct: 489 VAERRMSNVLELRRWWV-IHTERGGDLTEFLQHIFLLAEKQDDD---PSGQVRLMTVHAA 544 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F V ++GM +G++P + A D +R +++R L A+ A+ L Sbjct: 545 KGLEFDQVYVIGMEEGIFPHRNA-------------LDENRMEEERRLMYVAMTRARFLL 591 Query: 728 YISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 +SY + + PS ++E + + D +E++ + A Sbjct: 592 TLSYSLTRRRFGTIEKCAPSPFLKEPDQSVLRWVDKDADSEEAHEEAQDHMAA 644 >UniRef50_A7AXS4 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXS4_RUMGN Length = 625 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 54/377 (14%), Positives = 118/377 (31%), Gaps = 84/377 (22%) Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 E + ++ + + DI ++ S D + + I D Sbjct: 320 YEECLWVASKIGEL--KFKGYDYNDIAILARTNAQLQKL-----ESTLHDEDIAFEIVDG 372 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + P ++ IS L L+ E YL N Sbjct: 373 KTFTELPEIKLIISYFKLA------------LNTN--------DNESFSYLYNKPN---- 408 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 RW +D ++E+ + ++ + Y+ + Sbjct: 409 RW-LDKKFLKEVTDNSFKRN------------------------ISLYNSMFTIDRRNW- 442 Query: 563 HLASLLMQLNIWRRGLA--QERPLEEWLPVCRDMLN-AFFLPDAETEAAMTLIEQQWQAI 619 + ++ L Q + + + R+ L+ F+ + + IEQ Sbjct: 443 RFKKGIDEIIEVINYLQNNQNSNISDLVRFLRNRLDIDKFVTKGKQSDDGSYIEQIDNLN 502 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 E + ++Y DEL ++ + V + T+ + + + VV ++G Sbjct: 503 SFENICSKYSSIKEFVSYIDELNTEMENKD------NDKVKLLTIHKSKGMEYPVVFIIG 556 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 N+ + P DD+R LF A+ A+++LY+SY+ + + Sbjct: 557 CNEEILPHYKNEN----------------VDDERRLFYVAITRAEKELYLSYV--DLYNG 598 Query: 740 SERFPSVLVQELIDYIG 756 + S ++++ + I Sbjct: 599 QTKLISSFIKDVENTIK 615 >UniRef50_C6D4S8 ATP-dependent DNA helicase PcrA n=46 Tax=Firmicutes RepID=C6D4S8_PAESJ Length = 785 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 58/386 (15%), Positives = 122/386 (31%), Gaps = 62/386 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 IT + S E + + ++ D ++ Y Q+ V Sbjct: 323 ITLYQADSEHDEGYFVTGTISKNVKS--GRRYDDHAIL------YRTNAQSRVIEEILIK 374 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY I ++ ++ L L + + +++VP + I + + Sbjct: 375 SDIPYQIVGGIKFYDRKEIKDLLAYLRLISNPDDDISLQRIINVP----KRGIGDTTVAK 430 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L E +R G +V L + GL E D Sbjct: 431 L----AEEAVRQGTSIFSVLG-NLQGIDLNARAQGL-------LHEFRDMIDNLTQMVDY 478 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 + EL + ++ +R L +E+ LE + + ++ F + E Sbjct: 479 L--SVTELTEKVLE----MSQYRIELQREKTLESTARL--ENIDEFLSVTMDFEKRNED- 529 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 + A + + +D++ + V + T+ + + F Sbjct: 530 -KTLVAFLTDLALIAD-------------IDSMDKDDDGKPADNNSVVLMTMHSAKGLEF 575 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 VV ++GM + ++P A D +++R L + A+++LY++ Sbjct: 576 PVVFIIGMEESIFPHSRA------------LNDNEELEEERRLAYVGITRAEKQLYLTCA 623 Query: 733 GRSIQDN--SERFPSVLVQELIDYIG 756 S PS +QE+ D + Sbjct: 624 RSRTLFGRISANLPSRFLQEVPDNVK 649 >UniRef50_A1WZS5 ATP-dependent DNA helicase UvrD n=3 Tax=Gammaproteobacteria RepID=A1WZS5_HALHL Length = 725 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 58/389 (14%), Positives = 126/389 (32%), Gaps = 71/389 (18%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 IT + + E + DR+ L E+ D ++ Y Q+ Sbjct: 318 ITLYAAFNEVDEARWVVDRIRQ-LSEEGGYGHADFAIL------YRSNAQSRALEHELHA 370 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 LP+ + ++ ++ L L +R +++ P I + + Sbjct: 371 ARLPFRVYGGLRFFERAEVKDALAYLRLVANRHDDASFERVVNTPP----RGIGAKTVDA 426 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 +R E+ + W++ Sbjct: 427 VRYAAREADV---------------------------------------SMWRAARELTG 447 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 S L A LAS L +++ L +RPL + + EA + + Sbjct: 448 SRALAARARNALASFLERIDALDSEL-TDRPLHDQVEQVIAR-TDLRRHHERDEARLENL 505 Query: 613 EQQWQAIIAEGLGAQYGDAV-PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 ++ A + D + PL+ L+ V + TL + + Sbjct: 506 DELVTAARTFAQRDEPEDDLDPLAAFLTH--AALEAGEGQADDWEHSVQLMTLHSAKGLE 563 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F VV L+GM +G++P +++ + R +++R L + A+Q+L +++ Sbjct: 564 FPVVFLVGMEEGLFPHRMSVE------------EPGRLEEERRLCYVGMTRARQRLILTH 611 Query: 732 IGRSIQDNSER--FPSVLVQELI-DYIGQ 757 + ++ PS + E+ +++ + Sbjct: 612 AEKRRLHGMDQLARPSRFLTEIPGEHLEE 640 >UniRef50_D1KF50 SRS2 n=6 Tax=rosids RepID=D1KF50_ARATH Length = 1147 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 56/400 (14%), Positives = 136/400 (34%), Gaps = 54/400 (13%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPT--LTPRDIIVMVADIDSYSPFIQ-AVFGSAP 430 IT CH+ + + + D+++ + + T + DI ++ Y + VF +A Sbjct: 581 ITVKECHNEEAQCAYVIDKIIEITNDGSTPCCSHGDIAIL------YRRQVSGKVFQNAF 634 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDS---RFVSEDVLALLDVPVLAARFDITE 487 R +P+ + A V++ +++L S V L + Sbjct: 635 RQRKIPFNV-HGVAFYRKKVVQVILAMLKTTFSECDDASYRRVFKAL--------LPFEK 685 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 E + + + + + I + + + F +++ G V Sbjct: 686 EEKKRIIEHIEK--ISTSRKCSFISAASDIFNAKISGTFKRSQLTQG---RKVLQTLDMV 740 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + ++ +V +A+++ ++ L E V + D + + Sbjct: 741 AKLVDREQSLSAVVTCVANMI-----------PQKYLLEQRAVVDNDGGKLLNEDNDLRS 789 Query: 608 AMTLIEQQWQAII-AEGLGAQYGDAVP-------LSLLRDELAQR-LDQERISQRFLAGP 658 + + I + DA+ L + +++R + R +R Sbjct: 790 VLQYLMDDVAEFISTHCTTTEEEDAIKEKKGCNQLHSFINYISERETENFRSRRRDNENS 849 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 V + T+ + + + +V ++ N+ P G S + +++R L Sbjct: 850 VTLTTIHQSKGLEWDIVFIVKANENEIPLLHESNGNASESG-------TSLEEERRLLYV 902 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 A+ A++KL+ Y+ PS ++E+ ++ Q Sbjct: 903 AMTRARKKLFFLYVTVDSNW-QVLQPSRFLKEIPGHLLQG 941 >UniRef50_C4R3W4 DNA helicase and DNA-dependent ATPase n=1 Tax=Pichia pastoris GS115 RepID=C4R3W4_PICPG Length = 802 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 64/484 (13%), Positives = 135/484 (27%), Gaps = 84/484 (17%) Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 + ++ ++ QE+ + + + N I+ + + S + Sbjct: 297 FENMIIHYQNCQEITLKENYRSTSNILNFSEQIMTQQKDRKQKSLRSQISHLNIPIVYVR 356 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAM-LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 ++ E + + + + L + DI +++ S F V Sbjct: 357 TQNTFK---------EADHIASEVAKLGLMSGLLTSYNDIAILLR-----SSFQSRVIEQ 402 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + +PY + RA + + L + + +L L+ P + + Sbjct: 403 SLVTNRIPYEVVHGRAFWELKEIRVAMDYLRAIVNNSDNLAILRTLNFPP----RGVGNK 458 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L+ L + +++S + P L A+ + + +V Sbjct: 459 TLQRLEELIDKS--------------DCPVIET-----------LEMAIHDKKNGFLNVK 493 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN--------AFFL 600 +++ LL L E LE + N Sbjct: 494 SESGVR-QYIDILKECGRLLDS-----TSLDCEASLEACFDQIVQLANLKEIKKTPETSK 547 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLG-----------AQYGDAVPLSLLRDELAQRLDQER 649 ++E A+ +E+ + + + + +D Sbjct: 548 GTHDSENALKAVEENLNEFKRQLIEYKPIIDQIITAEAGDTPLTTRDVLSSFLDSIDLYE 607 Query: 650 ISQRF-----LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 S G V I T+ + + + VV + G DGV P + Sbjct: 608 TSNNENKKDSKKGRVTISTIHGAKGLEWPVVFIPGCTDGVIPSKWTLEDDG-------PD 660 Query: 705 DRSRRDDDRYLFLEALISAQQKLYI-SYIGRSIQD--NSERFPSVLVQELIDYIGQSHYL 761 + D+DR F AL A+ LY+ SY RS S ++ + Sbjct: 661 SSTNLDEDRRCFYVALTRAKSMLYLSSYKERSTPWSGEESNEVSCFLKPTLKMFQNQLVT 720 Query: 762 PGDE 765 Sbjct: 721 SISN 724 >UniRef50_Q2STJ5 ATP-dependent DNA helicase Rep n=90 Tax=Bacteria RepID=Q2STJ5_BURTA Length = 848 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 50/397 (12%), Positives = 112/397 (28%), Gaps = 69/397 (17%) Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDP---TLTPRDIIVMVADIDSYSPFIQA-VFG 427 SIT C+ + E E + + L RD ++ Y QA +F Sbjct: 474 DSITVTPCNDEEHEAESV----VFRLSAHKFERRTQFRDYAIL------YRGNFQARIFE 523 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 +PY +S ++ ++ + L L + + + P R I Sbjct: 524 QVLRRERIPYVLSGGQSFFDKAEIKDLCAYLRLIANADDDPAFIRAVTTP----RRGIGN 579 Query: 488 EGLRYLRQWVNES-----------GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 L L + ++ GI + + L + + Sbjct: 580 TTLEALGAFAGQAKVSLFEAVYMGGIEARLSARQIEPLRIFCDFIQRLTDRADKEPATVV 639 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 ++ Y + + ++L L +R + P + Sbjct: 640 LDDMMEAIH-YEAYLYDAYDERQAQTKWQNVLEFLEWLKRKGTKPEP------------D 686 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 +AE + + ++ + + Sbjct: 687 EAVDGEAEGFHNADGLADTGKNLLGLIQTVALMSMLE-----------------GKEEDP 729 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 V + T+ + + + V L+G+ +G+ P D R +++R L Sbjct: 730 DAVRLSTVHASKGLEYPHVFLVGVEEGIMPHSGGSDDG--------PIDDERIEEERRLM 781 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFP--SVLVQEL 751 A+ AQ+ L++++ + + S + E+ Sbjct: 782 YVAITRAQRSLHLNWCKKRKRARETIVCEQSRFIAEM 818 >UniRef50_C1XZD7 DNA/RNA helicase, superfamily I n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XZD7_9DEIN Length = 646 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 57/417 (13%), Positives = 133/417 (31%), Gaps = 76/417 (18%) Query: 337 NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 + + I+ + +S+ V + E + + Sbjct: 280 EVANRIIAQNATRKPEMQEAHLPQSEEPF----------LLVAKNRWEEAHFVAQAV--E 327 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + ++ V++ + F+ A R +PY + R+ ++ ++ Sbjct: 328 FYRGQGIALEEMAVLMR-----ANFLSRDLEQALRLRGIPYQFTGGRSFFERREIQLGMA 382 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES---GIRWGIDDDNVRE 513 +L + + S V AL + + V + GI+ ++ Sbjct: 383 VLKVLANPKDSLAVAAL-------------------VEEMVEGAGPLGIQKVLEAAKAAN 423 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 L ++ + + L G +++ VL +A L L Sbjct: 424 LSPLEAFRNP---AMVKGLRGKEVQAEAMRLAEVL-----QDQVARLAAEAPEYHALLKE 475 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 L E WL + ++E + + + E G + Sbjct: 476 TLDRLG----FEAWLDRLGE--------ESEQVYSRKANLDRLLQGMQEWQEVNPGAPL- 522 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 +D + L + + V++ T+ + + F+VV ++G+N+G++P A Sbjct: 523 ----QDLVGTLLLEAGDTPAEEGQGVHLMTVHASKGMEFRVVFVIGLNEGLFPLSKASSS 578 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 F+ + +++R L A+ A++ L++SY + + V V+E Sbjct: 579 FEGL------------EEERRLMYVAVTRAKEVLHLSYAADGVVSRFAQEARVPVEE 623 >UniRef50_Q1DC55 ATP-dependent DNA helicase PcrA n=2 Tax=Cystobacterineae RepID=Q1DC55_MYXXD Length = 783 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 65/410 (15%), Positives = 130/410 (31%), Gaps = 41/410 (10%) Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISD 441 + E + + ++LA L+ + + + V Y Q+ V A +PY + Sbjct: 332 RAEGQEVARQILA-LQREGFIKLSSMAV------FYRANAQSRVLEEALRLARVPYTLVS 384 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 R+ + + L L + D+L ++++P I + + + + N G Sbjct: 385 GRSFYDRAEVRDASAYLRLMVNPRSDADLLRIINIPA----RGIGDTTVERVTDFANARG 440 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 + + + + ++PA L G A++ +G + + E Sbjct: 441 V--SLYEVLSQPEQIPA-------------LNGAAVKRLKGFRNLLESLTAFAQTNEEAA 485 Query: 562 GHLASLLMQ--LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE-QQWQA 618 G + +L + L + + + R+ L A D AA Sbjct: 486 GAVDQMLRETKLVETLQAEGSDES-QTRAENLREFLGAAQEFDLNRAAAAVAAAANPPSD 544 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + E A VP L+ L Q G V + TL + + F V L Sbjct: 545 VPPEVDAAPLTADVPA--LQAFLEQISLVGEADAEVGDGRVALMTLHAAKGLEFDAVFLT 602 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD---DDRYLFLEALISAQQKLYISYIGRS 735 GM + V+P A + D + ++R L A+++L++S Sbjct: 603 GMEENVFPHSRAVKSESTFLNEVASADGEPSEEMAEERRLCYVGFTRARKRLFVSLAQCR 662 Query: 736 IQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 R+ PS ++++ + E Sbjct: 663 SLFGELRYNAPSRFLRDVP---PALFGISEQEVPEAPRPMVPSTQRRRTW 709 >UniRef50_A6UNC7 UvrD/REP helicase n=1 Tax=Methanococcus vannielii SB RepID=A6UNC7_METVS Length = 1016 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 75/658 (11%), Positives = 189/658 (28%), Gaps = 95/658 (14%) Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 + N + + E + + + E E + + + +++ L Sbjct: 300 NIVNLSQELIKNNEKREKKTVKSNKSSEEKVNVVSMPDDYSEAEWVSNEVQNLIK--KGL 357 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 TP+DI ++ F + +R +P Q PV++ +S +S Sbjct: 358 TPKDIFILTRKTAD-----GKKFSDSLKNRLIPSEYIGNYRLQDFPVIKDTLSYISAISD 412 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 F S +D + R + E ++ + P Sbjct: 413 PFNSG-----IDFKKIFTREGLFEHDIQKI------------NKKAKELTYSNPEISGDG 455 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + L + L +E+ E+ + + +L I+++ Sbjct: 456 IFYVLEKNLSELNLEN------------------LEIAKSIFENINELLIYKKNHLPSDT 497 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 L+ L D+ + + +++ E + + +S + L+ Sbjct: 498 LKHLLIEKTDIYKLEIHQNTLNSRKNIELLNSLISLVEEFESVRKTEFEEISEYLNILSD 557 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 + V I T+ + K V + +++ P Q F + K Sbjct: 558 F--EVEPEDFLENDTVKIMTIHQSKGKEAKAVFVCDVSERHLPLQYRKKEFTVPLDLQKG 615 Query: 704 GDRSRRDDDR-------YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 + D+ + L A+ A+ KLY++Y + E PS+ + + Y+ Sbjct: 616 IKKDNFDEKKLYLEEELRLLYVAMTRAKDKLYLTYPKIFSGNKKESKPSLFLDGI-SYLQ 674 Query: 757 QS---------HYLPGDEALNCDESEARVKAHLTCLHTRMPF------------------ 789 P + + L ++ Sbjct: 675 NDKVNFFETEKFEKPVMSVESPINKKISEYERLVIKYSVQKQYKKAIESIITLVKINELE 734 Query: 790 DPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 N + + + +P S+ + + + PL ++++ P+ + Sbjct: 735 KSGNLSNFDLNDFLKIDIPDISELSELLTVKLPPL-VDKSMKFSASKIKQYIGCPLNFKY 793 Query: 850 QMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPY 909 L + + G ++I + L + + + + + +L Sbjct: 794 NYVLNIPTPKKAHLTV--------GTDVHKIFEDLGILKNKGEAIDLELAKSMLSENLKE 845 Query: 910 GAF-GEIFWETQCQEMQQLADRVIACRQPGQ------SMEIDLACNGVQITGWLPQVQ 960 +F + +E + + ++ + + + +L G TG + ++ Sbjct: 846 FSFNSKTEFEEEYSKSLKMIEYWFDFESKNKNKILATEEKFNLDLGGFTFTGIIDRID 903 >UniRef50_Q5PB91 DNA helicase II n=20 Tax=Rickettsiales RepID=Q5PB91_ANAMM Length = 671 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 50/367 (13%), Positives = 111/367 (30%), Gaps = 73/367 (19%) Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 + ++ + ++V + F VF +PY I Sbjct: 356 AQFISEYIKGSSEYRFDETAILVR-----AGFQTRVFEEYLVRCGIPYKIIGSTKFYDRQ 410 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 ++ ++ L + + +++ P + + + +R + + Sbjct: 411 EIKDLVAYLRVVTNPKNDIAFERIVNKP----KRQLGASTVAKMRAYARD---------- 456 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 L L +G+ RFGL L L +LL Sbjct: 457 --NRLSLLESGESMIRFGL---------------------------LPERTSNTLQNLLD 487 Query: 570 QLNIWRRGLAQER--PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 + WR L + + + +N + + I + + A+ + Sbjct: 488 KFKCWRETLDTTSLTTVMQAIAEGSGYMNMLKDEGDAGASKIENIRELFAAVGNFENATK 547 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 + + + L E S V + TL + + F +V L G +GV+P Sbjct: 548 FLEHISLVT-----------EVDSPEQANNHVYLMTLHAAKGLEFPLVFLPGWEEGVFPH 596 Query: 688 QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPS 745 + + + +++R L + A+++L+IS + +N S Sbjct: 597 EKSIHD----------STGNALEEERRLAYVGMTRAREQLFISCVAVREVNNWRQPMKIS 646 Query: 746 VLVQELI 752 ++EL Sbjct: 647 RFIKELP 653 >UniRef50_Q11GU4 ATP-dependent DNA helicase, Rep family n=53 Tax=Alphaproteobacteria RepID=Q11GU4_MESSB Length = 876 Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats. Identities = 61/466 (13%), Positives = 131/466 (28%), Gaps = 77/466 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + H + E L + + A+ + L D+ ++V + F F Sbjct: 404 VKVHAAWDSEEEARALGEEIEALQAKGHAL--NDMAILVR-----ASFQMREFEDRFVTL 456 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 L Y + + ++ + +++VP + + E +R + Sbjct: 457 GLSYRVIGGPRFYERQEIRDALAYFRVVAQGADDLAFERIVNVP----KRGLGESAVRQI 512 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 G+ Q+ + Sbjct: 513 HDVARMRGV---------------------------------------PLLQAARDLVGT 533 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 L + L +L+ W+ L + R + + +L D Sbjct: 534 EELKPKPRASLRNLVESFERWQGLLDRTR----HIELAETILEESGYTDMWKNDRSAEAP 589 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + + + + L + +A +D ER + V++ TL + + F Sbjct: 590 GRLENLKELIRSM--EEYESLRAFLEHVALVMDAERDEEL---DAVSLMTLHSAKGLEFD 644 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 V L G +G++P Q + G RS +++R L + A++ L+I + Sbjct: 645 TVFLPGWEEGLFPHQRSLD----------EGGRSGLEEERRLAYVGVTRAKKNLHIWFTS 694 Query: 734 RSIQDN--SERFPSVLVQELIDYIGQ------SHYLPGDEALNCDESEARVKAHLTCLHT 785 PS + EL + + S G + + Sbjct: 695 NRRIHGLWQSTIPSRFLDELPEKHVEVTDDGGSFGGYGRPIADRQPGRPNPYGSSRFDNM 754 Query: 786 RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET 831 F PG +++ A G V+ + + P++ Sbjct: 755 GEVFSNSYATPGWQRAQKNRTEATARNWGSRSGHQVERIGYGEPDS 800 >UniRef50_C9LR66 ATP-dependent DNA helicase PcrA n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR66_9FIRM Length = 746 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 41/371 (11%), Positives = 112/371 (30%), Gaps = 74/371 (19%) Query: 390 HDRLLAMLEEDPT---LTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISDRRAR 445 D ++ + ++ + + V+ Y Q+ V + R + Y + Sbjct: 338 ADFIVESMMKEHGENHVPYGKMAVL------YRMNAQSRVIEESMVKRGIAYTMVGGTRF 391 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 + ++ L L + ++ +++VP R I + ++ L ++ + Sbjct: 392 YDRAEIRDMLAYLKLVANFRDDISLMRIINVP----RRGIGQTTMQKLSEFSKQ------ 441 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 ++ ++ +ES + L Sbjct: 442 ---------------------------------GNMSMFEGIMSLEESD-IPVPARTKLQ 467 Query: 566 SLLMQLNIWRRGLAQER--PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 + + + L + + + L+ + + + + Sbjct: 468 KFSALIFSFLNASTEGDVFTLIQKIMTDTEYLSVLQQSSDPQAQSREENLGELLNVAKDF 527 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 Q +P + L + S V + T+ + + F +V + GM++G Sbjct: 528 TQEQPEGGLP--EFLE--KVALVNDVDSFEEQDDKVTLMTIHSAKGLEFPIVYMAGMDEG 583 Query: 684 VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF 743 ++P + D + +++R L A+ A++KLY++ + Sbjct: 584 IFPGVRS------------LMDETALEEERRLCYVAITRAKEKLYLTTSAVRTMYGQVKP 631 Query: 744 --PSVLVQELI 752 S ++E+ Sbjct: 632 YVESRFLKEIP 642 >UniRef50_D1ACX8 UvrD/REP helicase n=2 Tax=Streptosporangineae RepID=D1ACX8_THECD Length = 1059 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 90/675 (13%), Positives = 187/675 (27%), Gaps = 86/675 (12%) Query: 337 NIQSDILELENR--AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 + ILE R + D + + SP +E ++ D L Sbjct: 318 RMSPAILEASRRIARRLPAGPSAAEHRALRPRQGAEDGEVHVVIADSPGQEAALVADELR 377 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS-DRRARQSHPVLEA 453 + + V+V P ++ A A +P ++ D P + Sbjct: 378 RA-HLLEGVPWSRMAVLVRSAVRQVPPLR----RALAQAGVPVVVAGDELPLMGEPAVRP 432 Query: 454 FISLLSLP-DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 F+ LL + +++ +V L + LR+ + + Sbjct: 433 FLMLLRAALEKGYLTGEVAEELLTGP------LGGADALTLRRLKRALREVETLSGGDRP 486 Query: 513 ELELPATGQHTWRFGLT--RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 EL L R LL + + V + + L ++ Sbjct: 487 VGEL-------LVAALEDPRELL-LVHPKVRAPAERVAHLLQVARQGGTAEEVLWNVWQA 538 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 + L Q L+A + + + + + Sbjct: 539 SGLADAWLEQSAKGGARGAAADRDLDAVVVLFERAAR--------FTDRMPQAGPELFVA 590 Query: 631 AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP---- 686 + + Q V I T + + ++VV + G+ +GV+P Sbjct: 591 EISGEEIA-------GDTIADQAPEGEAVRILTAHRAKGLEWEVVIVAGVQEGVWPDLRL 643 Query: 687 ------------RQLAPLGFDLMSQKPKRGDR------SRRDDDRYLFLEALISAQQKLY 728 DL+++ + D++R LF A+ A+++L Sbjct: 644 RGSLLGVEELIEHHAGSDLADLLAEGGRGTAAGASMAAKLLDEERRLFYVAVTRARRRLV 703 Query: 729 ISYIGRSIQDNSERFPSVLVQEL-IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 ++ +G + PS + EL + +S L+ A ++A +T Sbjct: 704 VTAVGGDDTEER---PSRFLNELAPGALERSELDEKTRWLSLPALVADLRAVVTDPSRPQ 760 Query: 788 PFDPQNYQPGERQSYA--REWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPV 845 P R + A R P + A A S+ T+ ++ F + Sbjct: 761 PLRRAAAAHLARLARAGVRGAHPDSWYAITALSDPRPAFTADEQITISPSQVETFTTCGL 820 Query: 846 RAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAG 905 R + D + ++ + D R Sbjct: 821 RWLLASAVGARDGGPDELA-----------TMGKVVHAVAELAGSHGDLAEEDVAQRLDE 869 Query: 906 DLPYGAFGEIFWE-TQCQEMQQLADRVIACRQPGQ------SMEIDLACNGVQITGWLPQ 958 FG ++ Q ++ ++ D+ +A + + + V I G + + Sbjct: 870 IWKELNFGSSWYSGKQREQAAKMVDKFLAWHRANPNELVALEEDFQVELGRVVIRGRIDR 929 Query: 959 VQPDGLLRWRPSLLS 973 + D R + Sbjct: 930 AERDEHGRAVVVDIK 944 >UniRef50_B4U5U9 UvrD/REP helicase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5U9_HYDS0 Length = 715 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 56/427 (13%), Positives = 151/427 (35%), Gaps = 71/427 (16%) Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL-ENRAVAGVNIEEFSRSDNKRPL 367 D I + + + + ++ + + ++ +D+L+ + + V I + + +N+ Sbjct: 263 DNIISFIEDYNPEIIKLNINYRSSSEILSLANDVLKNSKAKWKELVPILKSHKKENQTYP 322 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 P+ ITFH + ++E E + ++ + ++ +I ++V +I Sbjct: 323 KPV---ITFH--PNEEKEAEWIAKKIEEL---SKSVPLEEIAILVR-----VNYITNFLE 369 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A +P+ I ++ ++ L L + S + P + I E Sbjct: 370 QALVKAKIPHKIIGALRFFQRKEIKDILAYLHLAINPKDSISFQRAITNP----KRGIGE 425 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + + + + I + L ++ + + R++ Y +E Q + +++ Sbjct: 426 KTVEKIINLSKQKSI--DLIQATKYVLGNKLFEENDFIKAMERLV--YNLEKGQAKDRNI 481 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 Y V L + + + ++ +E + +++L FF +A+ Sbjct: 482 SFY----------VEKLINDIRYFEYLEQEYKEDY--QERIDNVKELL-RFFEIEAQKHQ 528 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 +++ + ++ E + + + V I T+ Sbjct: 529 ENQ--KERLKELLQEISLMEEDEKDN----------------------SKAVKIMTVHKA 564 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F+ V + + +G+ P A D +++R L + A++ L Sbjct: 565 KGLEFEAVFMPRLENGILPHSSA------------FSDVLDMEEERRLLYVGITRAKKYL 612 Query: 728 YISYIGR 734 ++SY Sbjct: 613 FLSYTAA 619 >UniRef50_B0MNA1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MNA1_9FIRM Length = 792 Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats. Identities = 52/424 (12%), Positives = 118/424 (27%), Gaps = 71/424 (16%) Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 I + Q E + +R+L +++ D +++ + + A Sbjct: 372 DKIRMDRFSTEQEEAMFITERILDGVKQGK--KYADHVILYRNNAQSRTV-----ETTLA 424 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +PY I ++ I+ L + ++ + +++ PV I L Sbjct: 425 KSGIPYKIIGGVRFYERKEIKDIIAYLCVLNNNYDEVRFGRIVNEPV----RGIGAATLD 480 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 L + V+ GI + AM + Sbjct: 481 ELNRVVSGMGISYV-----------------------------QAMCESDSLPS------ 505 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 A+++ L +L+ ++ +++ L A E E + Sbjct: 506 --LSRKAKVLVPLGETFSELSQHTDDISDGSLIDDILDRF-GYREAMQRQGLEGEVRLEN 562 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 I + +I + LS + L + S + T+ + + Sbjct: 563 INELKSNMITFAKENEGAG---LSEFLE--QVALVSDMDSFEADDDKAVLMTMHSAKGLE 617 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F V ++G + ++P + D +++R L A+ A++ LY + Sbjct: 618 FDTVFVVGAEENIFPG------------YRSQFDPMEIEEERRLAYVAITRAKRHLYFTC 665 Query: 732 IGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 + + S V E+ Q A+ + + Sbjct: 666 AKQRMLYGQTMRNKVSRFVVEIP---SQYMAYDDHTAVTASAAARSAEQMKPRTSYLQQQ 722 Query: 790 DPQN 793 Sbjct: 723 QRSY 726 >UniRef50_B2S4R5 DNA helicase II n=3 Tax=Treponema RepID=B2S4R5_TREPS Length = 670 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 112/365 (30%), Gaps = 56/365 (15%) Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + D ++ Y Q++ F +PY I S ++ ++ Sbjct: 345 ARARGIPYADWAIL------YRVNAQSLSFEQCFLRNRIPYRIVGTLKFYSRAEVKDVLA 398 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR--WGIDDDNVREL 514 L L + + +L+ P I E+ L ++ I + ++ L Sbjct: 399 FLQLIVNGSDELALRRVLNKPP----RGIGEKTQDALFVCAQQAAITDFTTLQSTHLTAL 454 Query: 515 ELPATGQHTWRFGLTRMLLGYA--MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 A + + L R L +A E ++ P +E LA + + Sbjct: 455 GTRARQKVSSFLSLLRALRARMPQAPAAGEEARTSAPPEEPVEERTHDAEGLARFVSVVM 514 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 LEEW + E +++ A + Sbjct: 515 EHT-------GLEEWYRQ---------KDEEEGTQCAVNVQELMNAASLYACSHEG---- 554 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L + + +LDQ + A V++ T+ + + F+ V L G+ +GV+PR Sbjct: 555 -LVSFLEHI--QLDQNMADEGGAADAVHLITIHNTKGLEFRRVILTGLENGVFPR----- 606 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQE 750 D + ++R L A A LY++ PS + E Sbjct: 607 -----------DDEADIQEERRLMYVACTRAMDSLYLTACAYRRMWGRHTAMKPSRFLTE 655 Query: 751 LIDYI 755 L + Sbjct: 656 LDSAL 660 >UniRef50_B3PJ81 Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJ81_CELJU Length = 972 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 81/598 (13%), Positives = 165/598 (27%), Gaps = 118/598 (19%) Query: 408 IIVMVADIDSYSPFIQAVFGSAPAD---------RYLPYAISDRRARQSHPVLEAFISLL 458 I ++V ++ ++ F S LP+ S S P++ A + LL Sbjct: 313 IGIIVPNLGQCRAQLERAFTSVFEPLSVLPEHMRFTLPFNFSAGIPLGSTPLVAASLELL 372 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 L + + ED+ LL P + + L Q VN+ Sbjct: 373 GLYQNHWPMEDICQLLLSPF----WGHADAELVLRSQLVNQ------------------- 409 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS-----LLMQLNI 573 L + + S W L ++ G AE LA L+ L Sbjct: 410 ---------LRELGRFHISGSDLRYWAQKLATPKAGGNTAETANRLAEETFLNYLLHLEA 460 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAE--TEAAMTLIEQQWQAIIAEGLGAQYGDA 631 RR + P W + +L P + Q Q + G Sbjct: 461 QRRDSFGKHPASYWSELFNRLLQHLDWPGERRLDSQEHQQLAQWNQLLEDFAQLDACGLQ 520 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 + L Q + + P+ I + + F ++G++ +P +P Sbjct: 521 LSYGEALQHLRQIAAKTPFQAQTPLSPIQILGALEGSGLVFSHCWVMGLHHRQWPAAASP 580 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALI-----SAQQKLYISYIGRSIQDNSERFPSV 746 ++ + ++ + +F +L A Q + + S D+ E PS Sbjct: 581 NPLLPINLQRQQQMPHASAERELVFARSLTQHYRQCAGQ---VVFSCASSLDDQELSPSA 637 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW 806 L++++ P + P A W Sbjct: 638 LIRDI---------------------------------PLTPLEQ--LVPDANSLLADYW 662 Query: 807 LPAASQAGKAHSEFVQPLPFTLPETVP--LETLQRFWAHPVRAFFQMRLQVNFRTEDS-- 862 E E + + A P AF ++RL Sbjct: 663 QQLLQSRQLEAIEDNTGPAVGKDENIRGGASIFKEQAACPFNAFARLRLGARIPEAPVTG 722 Query: 863 -EIPDTEPFILEGLS---RY--------QINQQLLNALVEQDDAERLFRRFRAAGDLPYG 910 + + L+ R+ ++++ L + + R G Sbjct: 723 FSAIERGNMLHNALADLWRWLRDQASLLALDEESLQKQLHTFVNTAVMDTARLRGS---- 778 Query: 911 AFGEIFWETQCQEMQQLADRVIACRQPGQSM-------EIDLACNGVQITGWLPQVQP 961 + + + + + +Q L + + + I++ G+ + + ++ Sbjct: 779 SVSAFYTQLEQERLQALLREWLQRERERPAFTVVAIEHPIEVTYAGIPLRLRIDRIDQ 836 >UniRef50_Q1CRC0 DNA helicase II n=13 Tax=Helicobacter RepID=Q1CRC0_HELPH Length = 682 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 49/395 (12%), Positives = 122/395 (30%), Gaps = 78/395 (19%) Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 + ++ A+L++ L +I ++ ++ S I+ + +PY + + Sbjct: 318 VAYQIKALLKKGENL--ENIAILYR-LNGLSRSIEESLNAL----NIPYRLIGAVSFYER 370 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 ++ ++ + + + + +L+ P IT+E + L G++ Sbjct: 371 AEVKDALAFMHVVAKKDDRFFIKRVLNKPP-RGLGKITQEWIFSLLD-------DEGLNL 422 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 + +L + + +++ Sbjct: 423 EEALKLGAFKDKLN--------------------------------PKNEYALKKFMAMI 450 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL--IEQQWQAIIAEGLGA 626 +L +EE+ + N + E +++ + Sbjct: 451 GRLREAFEI-----SVEEFCARFLEETNLLKSYEKEDNYEEREGFVKELLTLLKEHF--- 502 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 P L D L + + A V+ ++ + + FK V ++G+ +G +P Sbjct: 503 ---KTNPTHSLLDFLNE--SVLDVHNAENAQKVSCMSVHMSKGLEFKHVFVIGLEEGFFP 557 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FP 744 + DL +++R L A+ A++ L +SY+ + P Sbjct: 558 HRGFNQESDL-------------EEERRLAYVAITRAKEGLQLSYVKERSYFGRKISCSP 604 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 SV ++E + Q D + + H Sbjct: 605 SVFLEE-AQLLQQDKPPKQDHKKDTPIKVGDLIKH 638 >UniRef50_C2KR35 ATP-dependent DNA helicase n=3 Tax=Mobiluncus RepID=C2KR35_9ACTO Length = 900 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 51/385 (13%), Positives = 115/385 (29%), Gaps = 42/385 (10%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYL 435 + + E + + + V Y Q+ + Sbjct: 386 FAADTERDEAAFIIREIRD--AHTAGTPWDEFAV------FYRTNSQSRALEEMLTRENV 437 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY + ++ I+ L+ + ++L +L+ P + + + +R+ Sbjct: 438 PYRVVGGTKFYDRKEIKDAIAYLTAAANPADDGNLLRILNEP----KRGLGDVAQTKIRE 493 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA--MESAQGEWQSVLPYDES 553 SG +G +R + T L +++ +G ++ P DE Sbjct: 494 AARLSGTSFG---QAMRGFITGGVHEGQLSAKATTALASLVNLLDNLRGLDEAGAPLDEI 550 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 G E G+L L + +E L + F L + ++ A L Sbjct: 551 LGTALEDSGYLPKL-----RASNNPQDDARIENLLE-LHAVAEEFSLSEPDSRLADFLER 604 Query: 614 QQW----QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + +G + +++ V + T+ + Sbjct: 605 ISLVADTDQLPDQGSKEVAAKEMAPREPETNVSEASGDHPNPAPETKPEVTLMTVHTAKG 664 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V + GM DG++P + D +++R L A+ A+++LY+ Sbjct: 665 LEFNTVFVTGMEDGLFPHSRS------------LDDPEAIEEERRLAYVAVTRARRQLYL 712 Query: 730 SYIGRSIQDNSE--RFPSVLVQELI 752 + S + ++ Sbjct: 713 TRAAARTVFGDTMNMPASRFLNDIP 737 >UniRef50_B2A859 ATP-dependent nuclease subunit B-like protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A859_NATTJ Length = 1048 Score = 100 bits (248), Expect = 5e-19, Method: Composition-based stats. Identities = 90/694 (12%), Positives = 192/694 (27%), Gaps = 124/694 (17%) Query: 327 VDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREV 386 VD PD+ LH I EL + ++ + ++ I EV Sbjct: 201 VDSLPDDSLHI----IDELTDALNDAHEGDDQIDTWKRKITFNTKEQIDLFSASGESVEV 256 Query: 387 EVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 + + + D L I++ + YS I +P + Q Sbjct: 257 KQVFSWI-----RDGCLPFDRTIILYSSSSPYSELI----YKLSEKYQIPVTFGEGIMIQ 307 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR--YLRQWVNESGIRW 504 + + LL +S + D+ +LD +L I E L +R+ + E+ I W Sbjct: 308 NTKPGKLLFLLLEWINSGYRVTDLNKILDENLLY----IGEGTLSGYKIRKLLREASIGW 363 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG-- 562 + R+ + E D L+G Sbjct: 364 SRNRY------------------FHRLEKVISELENLEELDDNAIDDNDHSRHQRLLGEY 405 Query: 563 -HLASLLMQLNIWRRGLAQER-----PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 L ++ + E+ L ++ F ++ + + Sbjct: 406 RALYRIINDIFTCLDYQTDEQDPEIISLASLSGCIARFIDEFGQVTSQFDKEAQQRIRDE 465 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-AGPVNICTLMPMRSIPFKVV 675 +I++ + + + + L + ++ R+ Q AG +++ + V Sbjct: 466 LELISQISKSY----LEIDQAIERLKESIENIRVGQELPQAGHIHVDHYQNGWWMLRDNV 521 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR-----YLFLEAL---------- 720 L+G + +P L ++ + D DR L L+ L Sbjct: 522 YLIGFDADRFPGNRQEDPILLDEERKQISDWLPLGQDRPKENYQLVLDMLKGIADMTGHM 581 Query: 721 ------ISAQQ---------------KLYISYIGRSIQDNSERFPSVLVQE--------- 750 ++ ++ ISY ++ E+FPS L+ + Sbjct: 582 ENGHTENRHRENGHRENVHNVHKEKGQMVISYSSFDTTEHKEKFPSSLLLQVYRQISGDS 641 Query: 751 ------LIDYIGQSHYLPGDEALNCDESEARVKAHLTCL----HTRMPFDPQNYQPGER- 799 L +Y+ + + A+ P + Sbjct: 642 DADYTTLQNYLMPPEGMIPKRQSEVMDEIDWWLANYVEYVENGQHLQLNHIVYCYPDLQK 701 Query: 800 --QSYAREWLPAASQAGKAHSEFVQPL-PFTLPETVPLETLQRFWAHPVRAFFQMRLQVN 856 +++ P + S + P + + L+ P F L + Sbjct: 702 GVEAFQNRLSPEFTVYDGNVSADRTAIDPRERAKPISPTRLELLGRCPYGYFLNQVLGIE 761 Query: 857 FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 + P L+ L+R + + E+ +R + P Sbjct: 762 PPEDIEFDPGK---WLDSLTRGSLLHTIF---------EQFYRELTLNQEKPQ---EHKH 806 Query: 917 WETQCQEMQQLADRVIACRQPGQSMEIDLACNGV 950 E + ++L D+ + P + + + Sbjct: 807 SEYLTEMAEELIDQQLEELPPPSDLVYQYEKDDL 840 >UniRef50_B0RZ36 ATP-dependent DNA helicase n=21 Tax=Bacteria RepID=B0RZ36_XANCB Length = 658 Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 53/413 (12%), Positives = 111/413 (26%), Gaps = 73/413 (17%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I C + E E + + + L + D ++ P A Sbjct: 310 IRVWECRDSEHEAEKVAAEI-SFLGTAKQVPWSDFCILFRGNFQSRPL-----EKALQLL 363 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY ++ A ++ +S L L + L + P + ++ L L Sbjct: 364 RVPYHLTGGTAFLERQEVKDVLSWLRLIVNPEDDAAFLRAVQSP----KREVGATSLARL 419 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + + + +S+ Sbjct: 420 AELASAKSV------------------------------------PMSRAAESMGALQHL 443 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE--AAMTL 611 A + +L + L + +LN + Sbjct: 444 PPRAANGLSAFTDILRDMREHSATLPAGELVRTLADK-SGLLNDLRNQSKDEAGFQRRKR 502 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + G + L L R D++ V + T+ + + Sbjct: 503 NLDELAEWFEGGPRGASASDLAAQL---ALLSRNDKDDGG-----NQVRMMTMHASKGLE 554 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F+ V ++G DGV P +++ +L ++R L + A+Q+L++SY Sbjct: 555 FRYVFIVGCEDGVLPHEVSLEEGNL-------------QEERRLLYVGITRAKQQLWMSY 601 Query: 732 IGRSIQDNS--ERFPSVLVQELIDY-IGQSHYLPGDEALNCDESEARVKAHLT 781 + + PS E+ + + P +A E A + Sbjct: 602 SKLTRKFGEHVRLKPSRFFDEIPAAELQRDGADPVADAERKKERANAGLAAIQ 654 >UniRef50_C3RQ43 ATP-dependent DNA helicase n=4 Tax=Bacteria RepID=C3RQ43_9MOLU Length = 714 Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 56/451 (12%), Positives = 147/451 (32%), Gaps = 86/451 (19%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLD-------SSITFH-VCHSPQREVEVLHDRL 393 IL+ R+ + S R D S H + S Q E + + ++ Sbjct: 276 ILDQNYRSTGNILNISNSLIRKNRNRLEKDLYTEATGGSEVIHYMGKSEQEEADYICSQI 335 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 ++ E + RD ++ + ++ + + Y I S ++ Sbjct: 336 EKIISEVDGVNYRDFAILYR-----ANYLSRTIEQSMISHGIDYRIFGGLKFFSRKEVKD 390 Query: 454 FISLLSLPDSRFVSEDV--LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 +S L L + ED+ +++VP I ++ L ++ Sbjct: 391 ALSYLQLVCND---EDLAFERIINVPA----RGIGKKTLENIQ----------------- 426 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 A+ + ++++ + + L ++ + +L+ + Sbjct: 427 ----------------------LVALNNQVSLYEALTLFSDQIKLSSKAKKEIITLVKAV 464 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 ++ + +++N D + + Q + Sbjct: 465 ETAKQSSLPLH------EMFENLMNDVGYIDMLKKDLEDNRIDNIHELQRSIYEFQNQNP 518 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGP-VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 ++ + + L + + + G V++ ++ + + F V +LG+++G++P A Sbjct: 519 -DIATIENYLQE-ISLYTDNDNLDDGQYVSLMSIHMAKGLEFDYVFVLGLSEGIFPSFRA 576 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI-GRSIQDNSERFPSVLVQ 749 D +++R L A A+++L+++ G S +S + S + Sbjct: 577 LSESD-----------EGLEEERRLAYVAFTRARKQLFLTDSEGFSFVTDSPKISSRFID 625 Query: 750 EL----IDYIGQSHYLPGDEALNCDESEARV 776 E+ I ++G +N ++ + Sbjct: 626 EIGSEGIKHVGTKPRFKTANFINTAPTKEEL 656 >UniRef50_UPI0001C314BB UvrD/REP helicase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314BB Length = 1184 Score = 99.7 bits (247), Expect = 6e-19, Method: Composition-based stats. Identities = 94/640 (14%), Positives = 185/640 (28%), Gaps = 86/640 (13%) Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD 441 E L R+ +L D D+++++ AV+ A D +P + Sbjct: 479 RVAEARALAARVRELL--DGGRRAGDVVLLLRATGDL-----AVYERALTDLAVPTYVIG 531 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 R + + ++ L + + + +LL P++ ++ +GL + Sbjct: 532 GRGYWAQQQVRDLVAYLGVLANPRDGVALQSLLASPLV----GLSSDGLVQVV------- 580 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV---LPYDESSGLIA 558 W R LL + + LP + ++ Sbjct: 581 ------AAARASRREGEPPDPWWVLTEGRELLARLAPDDAERVEELRAWLPAERATAPRH 634 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 L L +L Q L L R ++ +AE + Sbjct: 635 SLESLLDRVLDQTGYDVELLRLP-SGARRLANVRKLMRLAREFEAEEGRDLRGFVDMVME 693 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + ++ D + E + V + T+ + + F VVC+ Sbjct: 694 LGGGLESSREQDR--------------ESEAPVEGEALDAVRLMTIHRAKGLEFPVVCVA 739 Query: 679 GMNDGVYPR---------QLAPLGFDLMSQK---PKRG----------DRSRRDDDRYLF 716 + G P + +G L + P+ R+ D++ L+ Sbjct: 740 DLGRGS-PAAGSDVVRVGRDGRVGIKLKTLDGSAPRPALAYRPIGEARARAESDEEARLY 798 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG---QSHYLPGDEALNCDESE 773 A+ A+++L +S + + + + + P E +E Sbjct: 799 YVAMTRAREQLILSGAVPTEPWPEPKLGAPAITWIGPAFVPEIARLAAPDGEPSGVVSNE 858 Query: 774 ARVKAHLTCLHTRMPFDP----QNYQPGERQSYAREWLPAAS----QAGKAHSEFVQPLP 825 + A+ P G S+ARE PA +A Sbjct: 859 GQAVAYSVVRPGAAALAPSLAGSEGDRGRVLSHARERTPAGRRAHVRARATRPIGDGGGT 918 Query: 826 FTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL 885 T+ +L R + + L++ +D+ L +R I LL Sbjct: 919 APPVATLSYTSLADHARCGYRFYLERVLRL-PPVDDAPRGRGGRHGLAASTRGVIAHALL 977 Query: 886 NA----LVEQDDAERLFRRFRAAGDLPYG-AFGEIFWETQCQEMQQLADRVIACRQPGQS 940 + DAE + R AG P EI L +R+ + R + Sbjct: 978 EQVDFVRAQPPDAELVRRAAVRAGADPTAEELDEIRGLVVRFLASPLRERLASARDLRRE 1037 Query: 941 MEIDLACNGVQITGWLPQVQPDG----LLRWRPSLLSVAQ 976 A + + + G + +G ++ W+ L A Sbjct: 1038 QAFSFALDELPLVGVFDAIAREGNRTLIVDWKSDRLEGAD 1077 >UniRef50_B1XR07 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XR07_SYNP2 Length = 889 Score = 99.4 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 80/673 (11%), Positives = 186/673 (27%), Gaps = 105/673 (15%) Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD--NKRPLDPLD 371 L L + F L+ +Q +L++ + + + + ++ Sbjct: 178 LLYLPQVDDQPLFSPQAE--LIKRLQGKGWQLDDSQPETLTLGDRLSQKFFGQNSVNFEP 235 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 ++ HV + + E ++ +L++ + R I ++ + + + P + V Sbjct: 236 KTVQAHVYPNWEAEARGTLGQIKQLLQQ--GVAARKIAIVTNEDNHWGPLLLHVAQEYDV 293 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 LP IS ++ R + LL++ ++ + E L P+ Sbjct: 294 PLSLPNPISLQKTR----LGAWLEQLLTVIETNYSFEVTAQWLSHPLTHPLGR------- 342 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 W + ++ + + W L QG + Sbjct: 343 --EFWQAA----RTLKPNHFEAWQALTQEHYQWD-------LAVLQPPQQGSFL------ 383 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 W +++LN + Sbjct: 384 ----------------------------------VWREYLKEILNVLKVRRRALPWVTET 409 Query: 612 I-EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 + ++ + G + + + + E+ L + G V + + Sbjct: 410 VAYKKLIDGLDSL-GTSLTETMTWEMFQAEIRTSLQLLTTPAYPMRGGVGVHNPQNLIGA 468 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFD-------LMSQKPKRGDRSRRDDDRYLFLEALISA 723 + + + +GV PR L L + P G ++ +++ F L Sbjct: 469 QYDYIFCIDGAEGVMPRPLRDEPVLDFYTRKQLSDKLPIEGAIAKARREQFQFYSLLQVP 528 Query: 724 QQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA-HL 780 Q++ SY + + S+ Y + P ++ S A + +L Sbjct: 529 QKQFTFSYSTLGQGEGRYRSQVASI-------YFKKLGLQPKKTSIAIAASVAEARQFYL 581 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 T + + S + P P+ T L + Sbjct: 582 TQSQIPTELQSETLDQAIAAHQIEQRRLQKSALDEYQGLIGVPFPW-REHTFSASQLLQL 640 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL-FR 899 P + F L++ E EP G+ +++ + LNA E D + F Sbjct: 641 GQCPFKWFAGKVLKLAALDEPET--TLEP-SQRGILYHKVLELALNAYRENPDLDLTDFE 697 Query: 900 RFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME-----------IDLACN 948 + +A ++ + + + + I Sbjct: 698 QLKAWFIEAEDVLKLPELSAWERQCTEHIQTLQRAIAAPEFLPEGRHVFRLEDKIQFTWQ 757 Query: 949 GVQITGWLPQVQP 961 +ITG++ ++ Sbjct: 758 DFRITGYIDRIDQ 770 >UniRef50_C0QC97 PcrA1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC97_DESAH Length = 619 Score = 99.4 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 69/519 (13%), Positives = 150/519 (28%), Gaps = 96/519 (18%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 + + + ++ + L + ++ L + +G D+ Sbjct: 184 LLKTRDILRDFPEIQQRYKQQFTHILVDEYQDTNNLQDELTRLLLG------------DH 231 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLH----NIQSDILELENRAVAGVNIEEFSRSDNKRP 366 L + Q + F ++ L + I LE + I + + Sbjct: 232 GNLFCVGDDWQAVYGFRGSNVNHFLQFSNRYDNARIFRLEENYRSADEIVQAANGLIDFN 291 Query: 367 LDPLD---------SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 D +D + H S E E + RL A+ + + I V+ Sbjct: 292 ADKMDKKCFSQKKGGVVEIHEFFSEGEEAEWVAKRLKALNCKGEGIDFDKIAVVYR---- 347 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 + F F +PY + F ++L + + Sbjct: 348 -TKFCSLAFEKIFRMFKIPYRLMG-------------------AQGFFERMEILDI-NSY 386 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + AA+F + + + GI V+++ + +M Sbjct: 387 LSAAQFPNDDVSFERIIN-----TPKRGIGPAMVKKIGTMKEEGMSLSGAARKM------ 435 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 Q + + G + L LL L A ER L+ D L Sbjct: 436 ------VQERVLTPKIHGE----LSKLLELLDSLWDLPPNQAMERVLDG--TAYFDYLKK 483 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 +AE + IEQ + +Y + L + ++ + Sbjct: 484 KVKTEAEFISKKENIEQLVYTAREKSTILEYLEEAAL----------IREDTKDEDDDGE 533 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V + T+ + + F V ++G + ++P + ++R L Sbjct: 534 GVALLTIHSAKGLEFDTVFVVGCEEKLFPHWRSID-----------AGEQAIQEERRLMY 582 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 A+ A++ LY+S+ + + S + ++ + + Sbjct: 583 VAMTRAERFLYLSHA--NYRKGQFAMRSRFIDQIEECMA 619 >UniRef50_B1VFC4 Putative ATP-dependent DNA helicase II n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VFC4_CORU7 Length = 1188 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 77/536 (14%), Positives = 164/536 (30%), Gaps = 55/536 (10%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I +S E + D L D + +D+ V+V + +P A Sbjct: 412 IRVLRANSGTAERLHITDALRRAHVRD-GVAWQDMAVIVRSVGEIAPI-----RRALLTH 465 Query: 434 YLPYAISDRRAR-QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +P + P++ ++ L + +V L++ +R Sbjct: 466 GVPVRVDQTSIILAEQPLIRLLLTALEATYRPLENSEVRVLMES----MVGGADPIMVRR 521 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L + + ++ R + V E Q + L+ +L G A EW Sbjct: 522 LERVLAQALARQRLQGKPVPENTAGLPFQSS--DALSTLLNGTASAEDAAEW-------- 571 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC-------RDMLNAFFLPDAET 605 ++G + L + L R + +E L + Sbjct: 572 TAGFNNRELQILQDMSDVLTAGREAQRAGQSVEMVLWEIWKATGLDTRLQERALRGGTFG 631 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERISQRFLAGPVNICTL 664 A ++ G + + +E+ + L + + V I Sbjct: 632 SQADQDLDSVMMLFDMAGDFVERHPNASIRTFCEEVRAQELPTGGRERGVASNAVEILPA 691 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGF-------DLMSQKPKRGDRSRR-----DDD 712 + V + + +G +P G DL+ + + G R R ++ Sbjct: 692 HAAVGRQWHTVVVTRVQEGSWPAGPTVGGLFGQLELVDLLDRGIEPGTRVSRVASAVHEE 751 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY------IGQSHYLPGDEA 766 R LFL A+ A + ++ I + +N PS V+E+ D +G + ++ Sbjct: 752 RRLFLVAISRATRSTLVTCIDNASVENGV--PSRFVEEITDAPGAAVPLGTVDQIEQEDP 809 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 + + + L + Q P + S A + +S + +E + LP Sbjct: 810 VGQEATPGEPVQGELGLGLELGDSAQQGGPAVQASPAEQ---LSSSDQLSPAEQLSALPR 866 Query: 827 TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 L + L+ P + + +V + + + F + + + + Sbjct: 867 VLALEPLIAELRDVVTDPTQ---RHHRRVAAARNLAAMAEAGIFGSHPVDWWGMAE 919 >UniRef50_C2L0R7 ATP-dependent DNA helicase PcrA n=1 Tax=Oribacterium sinus F0268 RepID=C2L0R7_9FIRM Length = 793 Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 60/433 (13%), Positives = 140/433 (32%), Gaps = 78/433 (18%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 IL+L N +A + + ++F S + E + + D Sbjct: 288 ILDLANVVIAENQHRKQKKLWTAEKEGLK---VSFQEYESAKEEAAAVIRGI-----RDA 339 Query: 402 TLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 + +D V+ Y Q+ + +PY I ++ +S + + Sbjct: 340 GWSYKDQAVL------YRTNAQSRLLEEQCIHWNIPYQIVGGVNFYQRKEIKDILSYMKI 393 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 ++ + +++VP + I E L L+Q+ G Sbjct: 394 LVNKKDDVALRRIINVP----KRGIGEASLLKLQQYGESLG------------------- 430 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 G+++ + LP+ +++GL + + + S L W+ Sbjct: 431 -------------GFSLVES-------LPFAKAAGLSGKALSMVGSFQEMLESWKDVELS 470 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 L + + + A + Q+ Q + + + LS +E Sbjct: 471 A--LIDRILQDTEYEKDLQAEGAIEAESRMENIQELQGKLQSYIEENGDEG-SLSAFLEE 527 Query: 641 LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 + L + + + TL + + F VV L+G+N+G++P + Sbjct: 528 V--SLLSDLDRSDLTEDKITLMTLHGAKGLEFPVVYLVGLNEGLFPSAQS---------- 575 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELI-DYIGQ 757 R+++R LF + A+++LY++ + S V ++ +++ + Sbjct: 576 --MFTPEEREEERRLFYVGITRAEKELYLTAGRDRVVHGQYQSMLVSSFVDDVPEEHLEK 633 Query: 758 SHYLPGDEALNCD 770 + + Sbjct: 634 KYLYRKKPSEEDI 646 >UniRef50_C6P8R1 UvrD/REP helicase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P8R1_CLOTS Length = 1088 Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 77/615 (12%), Positives = 170/615 (27%), Gaps = 115/615 (18%) Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 + LL E + L+ + L+ + +I + N + S ++ + Sbjct: 361 FKNLLEPYEELKYLNDTEEGPKVELITYNKQNIADPRNERFQSIKKLLKDDSKSEELHES 420 Query: 370 LDSSITFHVCHSPQR-EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 L I S + + ++ R+L +L D DI +++ +++V + Sbjct: 421 LMKDIK--KSESKRDFQGSIIASRILKLL--DEGYKYEDIAILLRS----RTGLESV-EN 471 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A +PY + + ISL L F D +ALL V + + F +++ Sbjct: 472 ALLKYGIPYCVIGGIGFWDKSEIIDIISLYKLV---FDMSDKIALLVV-LRSPIFGFSDD 527 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + L N+ G+ ++ + W ++ Y + + Sbjct: 528 DVYNLMSIYNDEGLSNILEALEKLTC---INRSNEWI-----IVRAYNILKEISNLNGIY 579 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 E I + L L G + R +E+ ++ F D Sbjct: 580 GAYEIFEKILD----LVDYKKLLISLPNGYQKYRNIEK----LEKIIKDFTDKDIFNARD 631 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + ++ LD E + V I T+ + Sbjct: 632 LVEYLSSFKEF-----------------------SGLDSEAFLDTEESDAVKILTIHASK 668 Query: 669 SIPFKVVCLLGMN------------------DGVYPRQLAPLGFDLMSQKPKRGDRS--- 707 + F+ V + M+ DG +L + R + Sbjct: 669 GLEFEAVIIPDMDKATDGVSIRHNHLFMLSEDGYMYGIGVNEEGELDKEANSRYKSAYDE 728 Query: 708 ----RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 + R LF A A++ L + + Sbjct: 729 YLERENQESRRLFYVASTRAKRFL------------------AFIGQ---------EKNK 761 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW-----LPAASQAGKAHS 818 L + + L D + Y R + + Sbjct: 762 TSELQNETALNSFMKQLFYAMDIDDIDIAVLNGNDLLMYDRNIKICKSYDKSEIGKLKND 821 Query: 819 EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT-----EPFILE 873 + +P + + + + P +++ +N + ++ + + ++ Sbjct: 822 NLIAEIPLKPQGNISITAYIDYLSCPKLYYYKYIAALNDEYIEEQLKNDDFYEYDALDID 881 Query: 874 GLSRYQINQQLLNAL 888 L R I ++L + Sbjct: 882 ALERGTIVHRILENI 896 >UniRef50_C3LBP3 ATP-dependent DNA helicase, UvrD/REP family n=82 Tax=Bacillus RepID=C3LBP3_BACAC Length = 688 Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 44/377 (11%), Positives = 110/377 (29%), Gaps = 59/377 (15%) Query: 390 HDRLLAMLEE--DPTLT-PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA-R 445 +++L +++E D +D ++ + +P+ Sbjct: 367 ANQILQLIQEKVDSGERNYKDFCLLYRTHSVSRSLLDQ-----LTIHKIPFIKHGASQSF 421 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 H +++ + L L F E + +L + I+ Sbjct: 422 YEHSLIKPVLDHLRLVIEPFRLESLSNILPTMYIGRDDCIS------------------- 462 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 + W++G R +L + V Sbjct: 463 ------------FIEREQWKYGEGRF---------PSLLHFLLLNPSLKPFQVKKVNERI 501 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 + + + L ++ L+E + L D + I+++ + E Sbjct: 502 DFIK----FIKELEPKKALKEIIHGKGKYLEYLQSNDRSSFTMHKDIQEEMLEELMESAN 557 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 L + + + + + E + V++ ++ + + F V LLG +DG+ Sbjct: 558 RFTDIPAYLQFIDEAIQGQKEMEALKTMPQKDAVSLMSIHNAKGLEFPCVFLLGASDGIL 617 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 P + + + +++R L A+ A+++LYIS + S Sbjct: 618 PHTSSLKDANDRVTETSEA----LEEERRLLYVAITRAKEELYISSPQ--FFRGKKLDIS 671 Query: 746 VLVQELIDYIGQSHYLP 762 + + + + Sbjct: 672 RFLYTVRKDLPEKTSTK 688 >UniRef50_Q28NL8 ATP-dependent DNA helicase, Rep family n=11 Tax=Rhodobacteraceae RepID=Q28NL8_JANSC Length = 817 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 53/441 (12%), Positives = 120/441 (27%), Gaps = 60/441 (13%) Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 + P I ++V + F LPY + + ++ + Sbjct: 374 EPIGPNSIAILVR-----ASHQMRAFEDRFLTIGLPYRVIGGPRFYERMEIRDAMAYFRV 428 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD----DNVRELEL 516 S +++ P + + ++ + +++ +G+ + Sbjct: 429 VVSPDDDLAFERIVNTP----KRGLGDKAQQTIQRMARSNGVSLLEGARLCVETQAIGGK 484 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH--LASLLMQLNIW 574 T GL R + L +++ + H LA +++ + + Sbjct: 485 GGRELRTLVDGLARWRIQLTGALRAAGPSDDLIEEDADPSEVPKISHIELAEIILDESGY 544 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 ++ E + + + + L Sbjct: 545 TSHWQNDKTPE----------------GPGRLENLKELVKALENF------------ENL 576 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 + ++ +D E+ Q V + TL + + F V L G DG++P Q + Sbjct: 577 QGFLEHVSLIMDNEQDDQEP---KVTLMTLHAAKGLEFPAVFLPGWEDGLFPSQRS---- 629 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELI 752 M + + G +++R L + A++ IS+ G + PS + EL Sbjct: 630 --MDESGQAG----LEEERRLAYVGITRAEEVCTISFAGNRRVYGQWQSQMPSRFIDELP 683 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 + + PG S + + + S L A Sbjct: 684 EDHVEVLTPPGLYGHQGSVSATA--SPVEREMAGSNLHEKAASADVYNSPGWRRLQARQG 741 Query: 813 AGKAHSEFVQPLPFTLPETVP 833 E + Sbjct: 742 QYGTRQPSEAKAMTIDAEAIS 762 >UniRef50_B9X9R1 UvrD/REP helicase n=1 Tax=bacterium Ellin514 RepID=B9X9R1_9BACT Length = 689 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 74/239 (30%), Gaps = 36/239 (15%) Query: 558 AELVGHLASLLMQLNIWRRGLA--QERPLEEWLPVC---RDMLNAFFLPDAETEAAMTLI 612 + + + R L+ Q L+ W L + EAA + Sbjct: 455 TRTRESIEEFVKFVEETRAPLSSGQSMSLKVWAEKFLTETGYLEELRRSEKTAEAADNRV 514 Query: 613 EQQ--WQAIIAEGLG------------AQYGDAVP-LSLLRDELAQRLDQERISQRFLAG 657 I+ E D L +EL + + + Sbjct: 515 RNLKDLTGILDEDNHTIVAGPDGTHQPVLTNDPADRLQTFLEELTLD-SERKEEKEAQGE 573 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V + T+ + + F V ++G+ DG+ P + + L D++R LF Sbjct: 574 AVTLITMHSCKGLEFPHVYIVGLEDGLLPHSRSKVEGTL-------------DEERRLFY 620 Query: 718 EALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 A+ A Q L ISY + PS ++EL + + + + + + + Sbjct: 621 VAITRAMQTLTISYCTGRKKYGQVMPCHPSGFLKELPEELVELGDEKAKQPVTVNTGKN 679 >UniRef50_A2F783 UvrD/REP helicase family protein n=1 Tax=Trichomonas vaginalis RepID=A2F783_TRIVA Length = 727 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 61/411 (14%), Positives = 126/411 (30%), Gaps = 55/411 (13%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I F E + + + M+ ++ RDI +M + + ++ R Sbjct: 329 IKFISASDAYAEADSICTEIERMVYPGSSIQYRDICIMFR-MKKVASELEM----ELFRR 383 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY S++R S F+ +V ++ L F E Sbjct: 384 NIPY--SNKRGL-----------------SFFMRSEVREIVSYARLLLNFGSEEND---- 420 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + S ++ + + A + +L Y + +S P Sbjct: 421 TNQLLSSSFEMVLNVPDRQLRACIAPQVTSEASKNKVNVLKYLELLINSKIKSDFPKATI 480 Query: 554 SGLIA--ELVGHLAS-------------LLMQLNIWRRGLAQERPLEEW-LPVCRDMLNA 597 L +++G L +L + + + EE + A Sbjct: 481 KKLAEFYQIIGKLNRQICQINTSLSTDTVLETIIEITKLCNLDENSEEKNSEDLDEFSEA 540 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 + L+ ++ + L A G + + + E S + Sbjct: 541 VQDMINDRNETFQLLLEESKRFHIRLLAANEGTPLSSQKCLQKFIDSITLETTSSN-MKN 599 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS-RRDDDRYLF 716 V + T+ M+ + V ++ N + P S GD+S +++R + Sbjct: 600 AVTLSTIHQMKGLESPVCFIMRFNQSILPMADKD------SDDSGLGDQSVSLNEERRIL 653 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL-IDYIGQSHYLPGDEA 766 A+ A+QKL+++ S + E+ +YI + L DE Sbjct: 654 YVAMTRARQKLFLTCALS--VRGKVMEISQFLPEIDQNYITRDIILTDDEK 702 >UniRef50_C8XDJ8 ATP-dependent DNA helicase PcrA n=2 Tax=Actinomycetales RepID=C8XDJ8_NAKMY Length = 864 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 61/400 (15%), Positives = 119/400 (29%), Gaps = 49/400 (12%) Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 + E + + + A+++ + D+ V +S S ++ VF +PY I Sbjct: 378 NEHDEAQFVGKEIDALVDAGEAV-FGDVAVFYR-TNSASRSLEDVF----IRNGMPYRIV 431 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 ++ ++ L + ++ +L+ P R I + + + Sbjct: 432 GGVRFYERKEVKDALAYLRAVANPDDEINLRRILNTP----RRGIGDRAEACVSVFAERE 487 Query: 501 GIRWGIDDDNVRE-LELPATGQHTWRFGLT-----RMLLGYAMESAQGEWQSVLP----- 549 I +G E L A ++ R +G+ ME A + Sbjct: 488 RIGFGEALQRTGEIPGLAARSANSLSSFAELLAGLRSEVGFGMEPADLLTAVLERTGYRA 547 Query: 550 --YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + + +L L+ L L L DA E Sbjct: 548 ELENSEDPQDGSRLENLDQLVSVLRETTETLLAGGGLAALGLAADAGPEPGDGADAPAEP 607 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + E L + + L D + + G V + TL Sbjct: 608 GPSADEDVPPDAGDLLLAVL--EQLSLVADADSVPDSAE----------GMVTLMTLHTA 655 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F VV + G DG++P Q A GD S ++R L + A ++L Sbjct: 656 KGLEFPVVFVTGWEDGIFPHQRA------------LGDDSELAEERRLAYVGITRAMKRL 703 Query: 728 YISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDE 765 Y++ S + ++ + + D Sbjct: 704 YVTRAMMRSAWGQPAANPASRFLDDIPAELIEWRRTDADA 743 >UniRef50_A6TQ92 UvrD/REP helicase n=2 Tax=Alkaliphilus RepID=A6TQ92_ALKMQ Length = 678 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 52/421 (12%), Positives = 130/421 (30%), Gaps = 81/421 (19%) Query: 366 PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV 425 P +S I + + + E + + ++ + +DI ++ + + Sbjct: 309 PTVKANSEIQYSEPKNREEENRTICQFIELLMS--EGYSYKDIAIIYR-----TNLLAGS 361 Query: 426 FGSAPADRYLPY-AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 + DR +P+ + H + + I+ L + + + ++ +++ P + Sbjct: 362 LVDSLLDRNIPFVSRDHIYNVFEHWIAKDIIAYLKGAFNYYDYDSLMRIINRPTRYITKN 421 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH--TWRFGLTRMLLGYAMESAQG 542 + Y + ++ ++ + +P ++ + L + E+ + Sbjct: 422 AMRKAQTYHKDFITALKVKGEL---------MPYQNKNIADLSYHLNNIKYLTTKEAIKY 472 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 + + AE L+ LN ++ ++ +L +DM Sbjct: 473 IRKDIGYDRHIENYCAEKRIRCEGLIETLNELEEASSRHEKIDGFLTHIKDM-------- 524 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNIC 662 L Q+ R V + Sbjct: 525 ---------------------------------------KSSLSQKSFH-RTEEEQVELL 544 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 T+ + + +KVV +LG +GV P D + +++R LF A+ Sbjct: 545 TMHSAKGLEYKVVIILGAIEGVIPHHK---SMDTLED---------IEEERRLFYVAMTR 592 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 A+++LYIS I+ PS + E+ + + + + ++ Sbjct: 593 AKERLYISSSL--IRYEKPTEPSRFINEIRQNDNKKGSFVIGQEVEHKTFGKGLIEQISE 650 Query: 783 L 783 Sbjct: 651 K 651 >UniRef50_A8RAD6 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAD6_9FIRM Length = 889 Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 82/585 (14%), Positives = 166/585 (28%), Gaps = 121/585 (20%) Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 + I F+ + ++E+E +L + +L +DI + + D SY I+ +F Sbjct: 178 FPKEEQEIAFYHAVNKRQEIEACAQHIL-----NHSLDAQDIHITLCD-ASYPKLIEQIF 231 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 ++PY + + P + F++LL+ E +LA LD + T Sbjct: 232 QRY----HIPYTLFQQETSSQLP--KQFLALLNYVFDPCK-EQLLACLDSEL------FT 278 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + LR+++ L L M G + Sbjct: 279 GGNIHALREYMQ-----------------LFEVDLFDNFHHLETM-------EDSGNLMN 314 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 + + L + A LL + L Q + + + + LN D + Sbjct: 315 IYTLKQLQELENKAAEAQAELL----PFFTQLNQNMQITNKVELIVNELNKHIHTDEDRS 370 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 I ++ I+ E V LA + + S++ + + Sbjct: 371 -----IYRKITTILYEIGDV-----VQTKNDLHFLASFFENIQGSKKQPSYQGVLIHNHK 420 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLG-FDLMSQKPKRGDRSRRDDDRYLFL----EALI 721 +P K +LG YP G FD +G S ++RY ++ Sbjct: 421 QEVLPRKYHYVLGATQTNYPAFQTKKGIFDEAYYALIKGYPSM--EERYAHYMEQMNQIL 478 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 + + L +SY S + ++ E+ Y Sbjct: 479 THSKYLILSYPVGSY-EGKSMEAAL---EIEQYAQTPSQP-------------------- 514 Query: 782 CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL-PFTLPETVPLETLQRF 840 + E ++ + L + + +R+ Sbjct: 515 --YPLH-----------------ENYAELRLQDTLSADMAKQLFLKNGCLHGSISSFERY 555 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ--INQQLLNALVEQDDAERLF 898 P F + L + EPF Y + +L +L E Sbjct: 556 VKCPFSYFLRYGLSLK-----------EPFQPGFPDAYAGTLFHYILESLTNAYGKEYSE 604 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEI 943 + + + + E+ + + Q++E+ Sbjct: 605 QSSKQLRKIVDKELAHLTQIFPSMELALMNVKERLLISMTQTLEV 649 >UniRef50_B2UPY5 UvrD/REP helicase n=2 Tax=Verrucomicrobia RepID=B2UPY5_AKKM8 Length = 669 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 58/380 (15%), Positives = 124/380 (32%), Gaps = 70/380 (18%) Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 V+ + D + + P +I V+ + F +P+ I+ Sbjct: 357 VQRIRDLI------EEGTDPSEIAVLYR-----AHFHSMELQMELTRGEIPFRITSGIRF 405 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 ++ ++ + + + + I + L W IRW Sbjct: 406 FEQAHIKDVVAFMRFVVNPRDELSFRRM-----VMLLPGIGPGMAQKL--W-----IRWT 453 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 P + Q T + ++L + + A+ Sbjct: 454 ---------ACPESRQETPPESFSALMLDFPVP-------------------AKSRTAWT 485 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 L L+ LA L + + A + D +AA +Q+ Q ++ Sbjct: 486 QLCYTLDE----LAPAGKLAGPASMLLSINEAVY--DEYMQAAFENYDQRRQDLLHLAGF 539 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 ++ ++ L + L D E + F G V + T+ + + + VV L+G+ DG++ Sbjct: 540 SERFESTEDFLSQLSLLGNTDDESAAADFSGGSVTLSTIHQAKGLEWSVVFLIGLCDGMF 599 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ-DNSE--R 742 P Q GD + +++R LF + A+ +LY++Y + + + Sbjct: 600 PHQRVIDD----------GDLAGLEEERRLFYVGITRAKDQLYLTYPRWNCRAQGGTFMQ 649 Query: 743 FPSVLVQELIDYIGQSHYLP 762 PS + E + + + Sbjct: 650 MPSRFLDEFPAGLVEEWEVE 669 >UniRef50_B2A098 UvrD/REP helicase n=3 Tax=Verrucomicrobia RepID=B2A098_OPITP Length = 668 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 62/447 (13%), Positives = 133/447 (29%), Gaps = 78/447 (17%) Query: 326 FVDVTPDNLLHNIQ------SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVC 379 F D P +H I+ +IL N + + + Sbjct: 285 FPDRHPGTAIHRIETNYRSTPEILNFANGVLLAQPKGRHFDKELRAARGHAQKPF-VVQA 343 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 + + E + R+ A++ ED ++ ++ ++ S F+ A + +PY I Sbjct: 344 MDDREQAEFILKRIRALV-EDEGVSLNEVAILYR-----SHFLALEVQLALSRAGVPYQI 397 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 + + ++LL RFV + + + + + Sbjct: 398 TSGVKFFERQHIRDLVALL-----RFVYN---------------GADTQAWQRIAVLLPK 437 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA- 558 G + G ++ Q VL D+ +A Sbjct: 438 IGEK-GAQKIYAAAVDHARLTQKNL--------------------LDVLNTDDVRSKVAK 476 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 + AS L+ + RP + + + Sbjct: 477 DARDDWASFCASLSEVAEKMQHARPADAVATAIEGWYGDYLKG------QYADYLDRLDE 530 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + A AQ + L + + A V + T+ + + + VV ++ Sbjct: 531 LKALVGFAQRFEE-TQDFLAQIVLLNSETSDRHVDPEAEAVRLTTVHQAKGLEYDVVFVI 589 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 G+ DG +P + + D+ +++R LF A+ A+ +LY+SY + + Sbjct: 590 GLADGQFPGRRSIESGDV-------------EEERRLFYVAVTRARNELYLSYPKVATRG 636 Query: 739 NSE---RFPSVLVQELIDYIGQSHYLP 762 PS + E+ + + + Sbjct: 637 GPGGMLLTPSRFLLEVPTDLYEPLRIK 663 >UniRef50_C5VUD6 UvrD/REP helicase n=1 Tax=Clostridium phage D-1873 RepID=C5VUD6_9VIRU Length = 597 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 47/363 (12%), Positives = 117/363 (32%), Gaps = 80/363 (22%) Query: 372 SSITFHVCHSPQREVEVLH--DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 +I + + ++E E + + + ++E L DI ++ ++SYS I+ + Sbjct: 297 GNIQIYN--NEKQEDEAVKIVNEIEKKIKEGENL--EDIAILYR-LNSYSIHIE----NE 347 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 R +PY I + + +E +S L L ++ V LL + I Sbjct: 348 LKRRDIPYYIDNNGSFFKRKEIECILSCLRLVENPHDDGAVDMLLRYRPYPFTY-IRNST 406 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 +R+ +G+ + + + ++ +W+ Sbjct: 407 KENIRKLSAMNGLS---------------------------LFQSFTLVNSSKKWE---- 435 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML--NAFFLPDAETEA 607 + +L +N +E+ L+ + +L + + + Sbjct: 436 -----------LNNLKEFENIINRLNLQYKKEQNLKMLVDNIIKLLKLEDYIKNNYTNQE 484 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + + + G LS + + + V + ++ Sbjct: 485 EIIDRLNSLNSFKSFIKGDN------LSNFITYIYSD-EDNNKKAKQKEDKVQMMSIHKS 537 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + FK V ++G+ DG +P + ++ ++ LF + ++ L Sbjct: 538 KGLEFKNVFIVGIEDGKFPNK-----------------KTNLIEEARLFYVGVTRPKENL 580 Query: 728 YIS 730 Y+S Sbjct: 581 YLS 583 >UniRef50_C4Y181 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y181_CLAL4 Length = 924 Score = 97.4 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 74/447 (16%), Positives = 136/447 (30%), Gaps = 63/447 (14%) Query: 340 SDILELENR--AVAGVNIEEFSRSDNKRPLDPLDSSITFHVC-HSPQREVEVLHDRLLAM 396 + IL L R E+ R+ + + P + C S +E + + Sbjct: 372 AAILALSERVMRQQMGREEKTLRAQHTASILPG------YACLDSAAQEARWIAHHISH- 424 Query: 397 LEEDPTLTPRDIIVMVADIDSYSP-FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 L + D V+V +Y I+ F A +PY I RA + A + Sbjct: 425 LGQYEIFDRADFAVLVR--TAYQTRAIETEFARA----KIPYTIVKGRAFWERRDVVAVV 478 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 L S + + L+VP R + + L Q + + Sbjct: 479 DYLRAVASDYDRLALFRALNVP----RRGFGPKSVAELVQL-------------HEKHKC 521 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW- 574 G + LG ++ + + + S L + + Sbjct: 522 SAFETLKQVASGAIQSSLGQKAQAQLTGFVNFVEKARSCLSECYEANDLGRFFNYVYVQS 581 Query: 575 -RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI------------IA 621 + R L F D E M IE + + + I+ Sbjct: 582 GLEKELEPDSEGNISE-VRSQLAQFVSEDEEVSGQMGEIETEKEELRIRVDTGDKNISIS 640 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 + A+ V LR L + S + + V+I T+ + + + VV + G++ Sbjct: 641 KIKKAESNLDVGREHLRQFLESLSLFDTDSSQESSQKVSISTIHGAKGLEWPVVFVPGLS 700 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS-YIG-RSIQDN 739 +G+ P A +++R F A A+ L++S Y Q Sbjct: 701 EGLLPASFAVDD----------SKPETINEERRCFYVAASRAKVLLFLSAYTEDSDGQWG 750 Query: 740 SE--RFPSVLVQELIDYIGQSHYLPGD 764 + PS +++L I P + Sbjct: 751 RKPIEKPSRFLKDLEGLICSKLSWPQE 777 >UniRef50_D0L0Z4 UvrD/REP helicase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0Z4_HALNC Length = 688 Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 121/403 (30%), Gaps = 51/403 (12%) Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 V + + E E + +L T RD V+ + A Sbjct: 323 RVIVAATAEDEAERIATEILHRHFRAQT-EYRDFAVLFR-----GNHQARLIEQALRKLN 376 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +PY+++ ++ ++ +S L L + L +++ P R +I + L Sbjct: 377 IPYSLTGGQSFFERAEIKDAMSYLKLLVNPDDDAAFLRVVNTP----RREIGPTTIEKLG 432 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + E R R + + + + L R + + Sbjct: 433 GFARE---RRSSLFAAARSIGIQSVFDNRAADRLNRFC---------DWLDGI--RAQPD 478 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 +++ + + R + + + + L+ Sbjct: 479 RDAIDVIQQVFDAIDYPAYLREQESTPKAADRRWQNVEEWLDWLAKISD----------- 527 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 + AE G + + L L + ++ ++ + V + TL + + F Sbjct: 528 --TQVEAESEGGESATKMDLPALAQRMTLLGILDQQTREKDSNAVALLTLHAAKGLEFGH 585 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V + GM + + P + D +R ++R L + A+ L + R Sbjct: 586 VFMAGMEEDILPHRDCIE------------DEARLAEERRLCFVGITRARLSLTFTLTKR 633 Query: 735 SIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 + + PS + ++ + Q ++ +++ R Sbjct: 634 RRRYGEWKDTEPSRFLDDIPADLLQWQGEGIEQPKEVSQAQGR 676 >UniRef50_B5YHS6 ATP-dependent DNA helicase PcrA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHS6_THEYD Length = 699 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 53/472 (11%), Positives = 139/472 (29%), Gaps = 91/472 (19%) Query: 326 FVDVTPDNLLHNI-QSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVC--HSP 382 F PD + + Q+ + I + K D C ++ Sbjct: 266 FEKDFPDTKIVKLEQNYRSTKHIILASSAMISRNTMRKPKILWTERDWGEKIFYCQLNNE 325 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISD 441 + E + + + + + +D ++ Y +QA A +PY + Sbjct: 326 EEEAKYIAKNIKELYLKG-DYEYKDFAIL------YRLVLQARALEEALRMEGIPYQVIS 378 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 + ++ ++ + ++ + ++ +++ P I + + + Sbjct: 379 GVSFYHRKEIKDVLAYMRFILNKEDNVSLMRIINTPP----RGIGASAISKIESEAKKYM 434 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 I + + R++ + + A L Sbjct: 435 I--------------------STFEAIKRII-------------------KEDTVSATLK 455 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 L S + ++ ++ + +D+LN + E + + + + Sbjct: 456 EKLVSFVTLIDELSEKDYKDA-----ASMIKDILNFTGYLEEIEEDRIQNVLEFLSSA-- 508 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 + +P+ D L + V++ TL + + F VV + G Sbjct: 509 --------EKMPVREFLD--KVALFSNVDTWENKKNYVSLLTLHAAKGLEFPVVFIAGCE 558 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS- 740 +G+ P A D ++R LF + A+ L+I+ + + + Sbjct: 559 EGILPYFKA------------LEDPFELQEERRLFYVGMTRAKNLLFITSVKQRKLYSKV 606 Query: 741 -ERFPSVLVQEL-IDYI-----GQSHYLPGDEALNCDESEARVKAHLTCLHT 785 ++ S ++++ +Y S + P + + + H Sbjct: 607 QKQETSSFIKDIPPEYCICIRKDYSTFAPNKKEPETSKIKPPFVIGCKVKHP 658 >UniRef50_Q6MFN4 Related to ATP-dependent DNA helicase n=7 Tax=Sordariomycetes RepID=Q6MFN4_NEUCR Length = 1105 Score = 97.0 bits (240), Expect = 4e-18, Method: Composition-based stats. Identities = 70/517 (13%), Positives = 152/517 (29%), Gaps = 97/517 (18%) Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 LL D + E+ + + IL+L + + I++ + K Sbjct: 270 LWRLLRDYPKTDEISL-EENYRSS------QAILDL-----SLLVIQQDKKRYQKVLKPV 317 Query: 370 LDSSIT--FHVCHSPQREVEVLHDRLLA-MLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 D + E E + + +L LT D+ V++ + + V Sbjct: 318 HDRGSRPVLRKLKNASTEAEWIVAEIRRALLMSGSMLTHNDVAVLLRS----ASLSRHV- 372 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 SA +PY + ++ + L + ++ +++VP + I Sbjct: 373 ESALGKAGIPYRMVGGFKFYERSEIKTILDYLRVIHQPDNNDAFGRIMNVP----KRGIG 428 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + ++ + E+ + L R + A+ + Sbjct: 429 DG---TIKNLIEEA-----------EKSSLSLYSLLVKHCRGDRTAKTKITKHAEQKISG 474 Query: 547 VL--PYDESSGLIAELVG----HLASLLMQLN---IWRRGLAQERP---------LEEWL 588 L + + E L L+ L ++ L P ++E++ Sbjct: 475 ELIRMLNGIRKKMEEAAESNPFGLVDLIEHLLTALNFQNYLQVTYPDDHEQRWANVQEFI 534 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 + D + + + + +EQ E + Q+ V L+ + + + + Sbjct: 535 SLANDFVRDLHVSGEDALPEIEGLEQS----KEEEVLPQFLANVSLASDAQKGEEGQENK 590 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 + V I T+ + + + +V + + +G P + G Sbjct: 591 PL--------VTISTIHAAKGLEWPIVFIPAVYNGSIPHMRSEDG--------------- 627 Query: 709 RDDDRYLFLEALISAQQKLYISYIGR-SIQDNSERFPSVLVQELIDYIGQSHYLPG---- 763 D++R L A+ AQ LY+SY S + S V + + + Sbjct: 628 -DEERRLLYVAMTRAQSLLYLSYPVYHSPGSSERTEMSSFVSPVANSFAKKGPTFERPLM 686 Query: 764 --------DEALNCDESEARVKAHLTCLHTRMPFDPQ 792 E + E + P DP Sbjct: 687 THIAKVLQRELPSEKEIFKGIPNMSHTEDNMYPIDPD 723 >UniRef50_C8WBZ1 UvrD/REP helicase n=7 Tax=Alphaproteobacteria RepID=C8WBZ1_ZYMMN Length = 768 Score = 96.7 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 63/446 (14%), Positives = 123/446 (27%), Gaps = 78/446 (17%) Query: 390 HDRLLAMLEEDPTLT-----PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 + ++ + L + +++ + F F + LPY I Sbjct: 343 AEEARQLVADVQNLRRANIPLNKMAILIR-----AQFQSREFEDIFIAKNLPYRIIGGFR 397 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 + ++ L + +++VP + Sbjct: 398 FYERAEIRDALAYLRVIAQPTDDLAFERIVNVP-------------------------KR 432 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 GI + +L A L R+ L A E E L +++ L Sbjct: 433 GIGKKAMEKLYQAAF--------LDRIPLAEAAEKLVSE----------KTLGSKITQSL 474 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 L+ + WR+ L + V R ML+ + + + Sbjct: 475 GQLMNDFSEWRKSL----SVVSHADVTRKMLDESGYKAMLRAVNDVQSAGRLENLTELAR 530 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 + D L + ++ +D E + + + T+ + + F V L G +GV Sbjct: 531 AMEEYD--DLGSFLEHVSLVMDHEND---PIDDKITLMTMHAAKGLEFDHVFLPGWEEGV 585 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ER 742 +P Q + G + +++R L + A++ I + Sbjct: 586 FPSQRSLD----------EGGLNSLEEERRLAYVGITRAKKCCTIFHAANRRVYGQWIAS 635 Query: 743 FPSVLVQELI-DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQS 801 PS + EL D+I + L + D + + P R Sbjct: 636 TPSRFISELPDDHIEEKSLLRKKAPIWRDIWAEDRSKNPAYNSAKEAITPPWQLASRRG- 694 Query: 802 YAREWLPAASQAGKAHSEFVQPLPFT 827 W A A PL Sbjct: 695 --AGWQRAQKAAASPSPAVSHPLKKK 718 >UniRef50_B4UKQ6 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID=B4UKQ6_ANASK Length = 797 Score = 96.7 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 61/427 (14%), Positives = 109/427 (25%), Gaps = 71/427 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + V E E + + A E + +I V+ P +A Sbjct: 326 LALLVGEDEHAEAERIARAVAA--ERGRGTSGDEIAVLYRTNAQSRPL-----EAAMRAA 378 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY I + + + L L S D+ +++ P I + + L Sbjct: 379 RIPYVIVRGTSFYERAEVRDAAAYLRLALSPASDLDLERVVNRPP----RGIGGKTVERL 434 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R + LP ++V D Sbjct: 435 R--------------AHAAARGLP-------------------------LVEAVAERDAV 455 Query: 554 SGLIAELVGHLASLLMQLNIWRRG---LAQERPLEEWLPV---CRDMLNAFFLPDAETEA 607 + L LA + L ++E L + E Sbjct: 456 AELKPAARRALAEFHALVTGLAADVPALDAGVAVQEVLKRSGMLSRLEEEHTDEAVERAE 515 Query: 608 AMTLIEQQWQAIIAEGLGA---QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 + + + G + V L L Q G V + TL Sbjct: 516 NLAELVAAAREFDESIAGEPPPGDPEEVRPPPLARFLEQIALLGEADAATPEGRVALMTL 575 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + + F+ V L GM DG P + + D++R L + A+ Sbjct: 576 HAAKGLEFEAVFLAGMEDGTLPYERPWADQTSSERDESL------DEERRLCYVGMTRAK 629 Query: 725 QKLYISYIGRSIQDNS------ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 ++L IS R I PS +++L + A ++ + Sbjct: 630 RRLTISLARRRIGYGENGPSYRNMEPSRFLRDLPPELFGDAVAREVRAREAAQAAPVARP 689 Query: 779 HLTCLHT 785 Sbjct: 690 PTIRRLP 696 >UniRef50_A0LDC5 ATP-dependent DNA helicase, Rep family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDC5_MAGSM Length = 673 Score = 96.7 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 67/435 (15%), Positives = 139/435 (31%), Gaps = 75/435 (17%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD---SSITFHVCHSP 382 F + P + ++ + N A + ++ ++ L D +I F+ + Sbjct: 273 FEEDFPQTKIIRLEQNYRSSGNILKAASGLINHNKGRMEKQLWTEDAQGDAIHFYQAEND 332 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + E + +L + + ++V +PY + Sbjct: 333 EDEARFVASEILTLCPAGD---YQQAAILVRTARQTRSL-----EEGLMRAGIPYQVVGG 384 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + ++ L + S ++++P + I L+ LR+ ++ Sbjct: 385 LRFLDRAEVRDALAYLRVVASNRDDVAFERVINLP----KRGIGPGALQSLREIASQ--- 437 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 R L +A A ES+ + Sbjct: 438 --------------------------ERCSLLHAARFAV----------ESNTMKGAAAK 461 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 LA+ + + R LA + E L + + + + + Sbjct: 462 GLAAFIQLIEHARSMLADDITPAEMLTKLLAL-----SGYRDYVRDLEKGNDRIDNLDE- 515 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 L L L +E+A D + +A V I TL + + F V L+G+ + Sbjct: 516 -LRNALARTESLQLFLEEVALATDLQDGG--PVANRVVISTLHAAKGLEFPWVFLVGVEE 572 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 V P +LA ++++P+ G +++R L + A+Q+LY++ R N Sbjct: 573 DVMPHKLA------LTEQPEIG----LEEERRLAYVGMTRAKQRLYLTMARRRWLFNKPV 622 Query: 743 FP--SVLVQELIDYI 755 P S ++EL I Sbjct: 623 MPIKSRFLKELPQEI 637 >UniRef50_C0A4D3 ATP-dependent DNA helicase n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A4D3_9BACT Length = 1069 Score = 96.7 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 78/206 (37%), Gaps = 15/206 (7%) Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 + L + L PL E L +L PDA+ + I + + + Sbjct: 873 VQALVTQIKTLPPSPPLAERLSQAAAILARADQPDAD----LRPITDALRPLAEKHGA-- 926 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 L + ELA +D + R A V++ TL + + F+VV L+G DG+ P Sbjct: 927 -----DLDAFQSELALGVDVDLHDAR--AERVSLLTLHAAKGLEFRVVFLVGCEDGLLPH 979 Query: 688 QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPS 745 + D + ++R LF + A+++L++++ R ER+PS Sbjct: 980 RFNFATADASDADTVAKTEADIAEERRLFFVGITRAKERLFLTHARRRHWQGELRERYPS 1039 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDE 771 ++++ D + + Sbjct: 1040 PFLRDIRDTLLDRQREDPPATPRARQ 1065 >UniRef50_Q0SMP9 Rep helicase, single-stranded DNA-dependent ATPase n=19 Tax=Borrelia burgdorferi group RepID=Q0SMP9_BORAP Length = 659 Score = 96.7 bits (239), Expect = 5e-18, Method: Composition-based stats. Identities = 53/391 (13%), Positives = 135/391 (34%), Gaps = 63/391 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I F + +E E + +++ L + + I V++ + ++ +F + Sbjct: 308 IDFFIFEDEIQESEFVASQIIE-LSKLEGFQSKKIGVLMRTNALFKN-VEMIFKR----Q 361 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 + Y +S + ++ IS L++ + D+L ++++P R I +E L+ + Sbjct: 362 GIKYKVSGGTSFFQRKEIKDIISYLNVIINPKSDYDLLRIINIP----RRGIGKEYLKKI 417 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R ++ G + A+ + S+ YD+ Sbjct: 418 RDMADKKG-----------------------------CCIYDALCDIAFSFASISSYDKV 448 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA------FFLPDAETEA 607 L +++ + + + ++ + ++ + + ++M+ + + + Sbjct: 449 --LNKQVIESIEDFVSFIEEYQYKFSIKK--NTYSNIIKEMIESIEYWGFLVSENPNSIK 504 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA-QRLDQERISQRFLAGPVNICTLMP 666 Q + ++ + L L L L +S+ +N+ T+ Sbjct: 505 VAEYKYQNIEGFLSIIKNWESKQLGELRDLSSFLNYIVLQSNEVSEESENININLMTVHS 564 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F V + + D + P +L ++ R +F AL A+ Sbjct: 565 AKGLEFDYVFFIAVEDNIIPHHRIIEDSELDLEEE-----------RRVFYVALTRAKDS 613 Query: 727 LYISYIGRSIQDNS--ERFPSVLVQELIDYI 755 L I+ + +D E+ PS + E+ Sbjct: 614 LVITMANKRKKDRQIFEQLPSRFISEIPKEF 644 >UniRef50_C4XGR7 ATP-dependent DNA helicase n=4 Tax=Desulfovibrio magneticus RS-1 RepID=C4XGR7_DESMR Length = 646 Score = 96.3 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 44/378 (11%), Positives = 112/378 (29%), Gaps = 76/378 (20%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + + + E ++ + + + D D+ V+ + S +Q VF A Sbjct: 334 LFVIDTFNEEEEACLVANEIKHLSVSD-GTAYSDMAVLYR-ANFQSEILQNVFVRAD--- 388 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P+ I + + + + L + +E L+ + Sbjct: 389 -IPFYIDNGMSFYERREVRILLDYLRFIEDPDSVA-----------------GDEALQRI 430 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + R+ + + + L M + Sbjct: 431 IN----APNRYLGKKFMEQVAGVANESACSLYQALRTM-------DFDSPY--------- 470 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 + ++ + + + + + P E + + + F+ D + + Sbjct: 471 ------IRRNVHEFVRLMESFIQNEGEMGPAEVLAKLRQRLDYDRFVTDKDIPSPDNQAV 524 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 ++ + + + L E + V + T+ + + F Sbjct: 525 LNLNQLLQSAAR--------YASISEFLTYVATVEDETCSRDPSGVKLMTIHKAKGLEFP 576 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 VV ++G+ +G+ P KRGD +++R + AL A +LY++Y Sbjct: 577 VVFVVGLVEGIMP--------------TKRGD---LEEERRICFVALSRAMDRLYVTYSH 619 Query: 734 RSIQDNSERFPSVLVQEL 751 + S+ + E+ Sbjct: 620 NYL--GQPAKRSIFIDEM 635 >UniRef50_Q1IVP8 ATP-dependent DNA helicase, Rep family n=2 Tax=Bacteria RepID=Q1IVP8_ACIBL Length = 849 Score = 96.3 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 63/468 (13%), Positives = 136/468 (29%), Gaps = 74/468 (15%) Query: 377 HVCHSPQREVEVLHDRLLA--MLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADR 433 + + E + D + M+ D P+ V+ Y Q+ +F A Sbjct: 325 YEAPDGENESLFVADYINKYLMIAHDEDDEPKRAAVL------YRTNSQSRLFEEAMRRY 378 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 + Y + + ++ IS L L + S +L ++ P I + + + Sbjct: 379 GIKYNVVGGFSFYERAEIKDMISYLKLIQNPSDSVALLRTINTP----TRGIGKTTVEQI 434 Query: 494 RQWVNES--------------------------GIRWGIDDDNVRELELPATGQHTWRFG 527 + E+ G R + D L + Sbjct: 435 ERIALETNLPLWDALGHIVEQRLMQPRACAALKGFR-ELIQDARAMLYGKFEERLVETAQ 493 Query: 528 LTRMLLGYAMESA--QGEWQSVLPYD------ESSGLIAELVGHLASLL-MQLNIWRRGL 578 +++ A E + Q + +D ++ E +G ++ +R Sbjct: 494 VSKPEESDAAEPEIADEDLQDNMAFDFGELEPDAEEFSPEALGTAEEAAPEKVEGFRSPG 553 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 E + L +T ++ IE + E + A + Sbjct: 554 ENANVSEVLKFLIDRTGYIKQLEAEDTPESLARIEN-----LRELVNAAMDSRDRGETIA 608 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 D L V + T+ + + F +V ++GM +G++P LM+ Sbjct: 609 DFLDHAALVADTDDIEAGAQVTLMTMHAAKGLEFPLVFIVGMEEGLFPSSRT-----LMN 663 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF----PSVLVQELIDY 754 +++R L + A + L +S + ++ S + E+ Sbjct: 664 -------PDEVEEERRLCYVGMTRAMRILVLSRARYRRRYGTDMPDASTASRFLSEVPPQ 716 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 + + P + + R PQ + ++ SY Sbjct: 717 LFEDIGSPQKKTPVFGDDSYSTHYDYENEDQR----PQYGRTKQKTSY 760 >UniRef50_Q2S4M5 Probable ATP-dependent DNA helicase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S4M5_SALRD Length = 855 Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 69/452 (15%), Positives = 133/452 (29%), Gaps = 79/452 (17%) Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSI 374 + + D F P +L N + I ++R +N+ S Sbjct: 285 YEADEYLIRDTFRSQAPHTVLAN--AVIAHNDHRREKHLNLTRGFG-----------GST 331 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 H E + + + L+ TL +++V+V +P ++ VF DR Sbjct: 332 QVHAADGADAEATHVAGAIESQLDTGRTLP--EMVVLVRQYAQ-TPSLEQVF----IDRD 384 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 LPY I ++ + F T E Sbjct: 385 LPYRIVGNVPFYRRRPVQVLL------------------------RHLFWGTLEATVRTA 420 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 W + R + + + ++ +TR+ A+ L Sbjct: 421 GWFDHR--RNAQRYVDRFQKLMREPNRYVSTDLITRLCRE-AVGDETSITD--LLAASMG 475 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQE-RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 + + L + L + +WL D + + E Sbjct: 476 AMHDRTAERVERFLDTADQLVDRLDEPAHRTVDWLIKALD-YEDYLRRYSAFEELADRRI 534 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + +++I A L +++ +R + A + I ++ + + Sbjct: 535 RTARSLID-FARGHPDVASVLRRIKEI-----SVDRPDRGAQADVLEIRSIHRAKGREWP 588 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR---------------SRRDDDRYLFLE 718 VV + G NDG P + G +RR+++R LF Sbjct: 589 VVFVPGCNDGTIPTSRDDSTMPPPDEDDSAGASDDSGSEDSDTDDAPAARREEERRLFYV 648 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 AL AQ++L++SY + PS + E Sbjct: 649 ALTRAQEQLHLSY-------DRTEPPSPFLAE 673 >UniRef50_C6CW81 UvrD/REP helicase n=2 Tax=Bacillales RepID=C6CW81_PAESJ Length = 692 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 55/378 (14%), Positives = 118/378 (31%), Gaps = 70/378 (18%) Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 + E +++ + LL +E + RD ++ + +A+F R +P I Sbjct: 370 NSDDEADLIVNTLLQQ-KEKKGRSFRDFAILFRT----ASSSRAIFDQLVI-RQVP-FID 422 Query: 441 DRR--ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 + V++ I+ L L R + + A+L + Sbjct: 423 YGSGESLYEQWVIKPVIAHLRLSIDRRNFDAMEAMLATMYVRPD---------------Q 467 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 W D ++ L + + E Sbjct: 468 AMAFIWNEDKKQAKKWPLIHLTR----------------------------FPEIKSFHQ 499 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 + + L+ L E + R F+ ++ A+T + + Sbjct: 500 DKIKERIKLIRSLEKL--------KPEAAIRRLRIEFYDQFIEANKSGPALTEHKDSLKE 551 Query: 619 IIAEGLGAQ--YGDAVPLSLLRDELAQRLDQER--ISQRFLAGPVNICTLMPMRSIPFKV 674 ++ E + + DE+A + ++ + A VN T+ + + F V Sbjct: 552 MLDELEASAKRFDGITAFLAFIDEIAAKHEEMKRMKLDSSNADAVNFMTIHKSKGLEFPV 611 Query: 675 VCLLGMNDGVYPRQLAPLGF-DLMSQKPKRGDR---SRRDDDRYLFLEALISAQQKLYIS 730 V + G+++G+ P A + + GD + +++R L A+ A+++LYIS Sbjct: 612 VFVCGVSEGILPHSSAITAEKNSDRSAIQAGDNVGEAAMEEERRLAYVAVTRAEEELYIS 671 Query: 731 YIGRSIQDNSERFPSVLV 748 S + Sbjct: 672 SPAY--YRGKPAAVSSFI 687 >UniRef50_Q8D2T2 UvrD protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D2T2_WIGBR Length = 719 Score = 95.9 bits (237), Expect = 8e-18, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 71/213 (33%), Gaps = 18/213 (8%) Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 + + L+ L + L+ + +LN + + Q+ Sbjct: 458 LKNFFYLIDYLKENIKNLSLHEKFNFVIKK-SGLLNFYEKEKKNINNSRIDNWQELVNSA 516 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PVNICTLMPMRSIPFKVVCLLG 679 + + L L+ ER + + + TL + + F +V ++G Sbjct: 517 KQFFIENNKEKNILEKFLAF--STLESERYTSYDDENYKIKLMTLHSSKGLEFPIVFIIG 574 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 M +G++P + + + +++R L + A +KL I+Y+ Sbjct: 575 MEEGLFPNIIYSNN------------KEKLEEERRLAYVGMTRAMKKLVITYVKYRNIYG 622 Query: 740 S--ERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 +R PS ++E+ + + Y + Sbjct: 623 KIIKREPSRFIEEIPSHYKKIIYENKTNTSKNE 655 >UniRef50_Q1D938 Putative uncharacterized protein n=2 Tax=Cystobacterineae RepID=Q1D938_MYXXD Length = 1079 Score = 95.9 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 93/655 (14%), Positives = 178/655 (27%), Gaps = 108/655 (16%) Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 E R + FS + L S+ + + E +L + +L + Sbjct: 244 FEGRPFIDLGRHLFSPRAPRDVLKDAVPSLRVWNAATARDEARLLARDVRRLLA--EGVA 301 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 P DI V ++ + ++ G LP+ + + L L + Sbjct: 302 PGDIAVAYRELGPEAGWLAESLGELGVPVRLPW----GEPLGLAGPVRLALDLPLLVEDG 357 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 F E + L+ + L ++ +R Sbjct: 358 FPVERMAELMGSRYAPKLSRGGPDAPATL---FAQAAVRDDRLGAVRGRGAYDVR----- 409 Query: 525 RFGLTRMLL---GYAMESAQGEWQSVLPYDES-------------SGLIAELVGHLASLL 568 GL R LL G +V E G AEL+ ++ Sbjct: 410 LDGLARRLLALNGTRKAQDSTRVDAVKLLRERCLLLVEACRRIPEEGTAAELLAAWWQVV 469 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 +L P EE + A +AA + + Q + Sbjct: 470 ERL-GLVDSEGALAPREE-----GGLGARAADARARDDAAREALRLRVQGLTRMMKAVGG 523 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGP-VNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 G + L + + R G V + + + F+ + L G+ +G +P Sbjct: 524 GPKMRRRTFGRWLRDAMADAHLPPRGPRGAAVEVLDVAELPGRSFQDLFLAGLTEGRFPG 583 Query: 688 QLAPLGFDLMSQKPKRGDRS--------------------RRDDDRYLFLEALISAQQKL 727 + AP L++ + R +DR LF AL +A+ + Sbjct: 584 RDAPSP--LLADAERAALNKHLGRDVFRLTGGEFDERAAWRLTEDRLLFASALAAAEANV 641 Query: 728 YISYIGRSIQDNSERFPSVLVQELIDYIGQSH---YLPGDEALNCDESEARVKAHLTCLH 784 +S+ S E+ PS ++E+ L L+ +E+ ++ + Sbjct: 642 SLSFAVESAG-GQEQVPSAFLEEVRRLTALKWEPRSLSPIPPLDEVLTESELRRCVALEA 700 Query: 785 TRMP----FDPQNYQPGERQSYARE-WLPAASQAGK------------------------ 815 P +P R+ +A E W A + + Sbjct: 701 LSQPKLRVTEPDAAAAVLRRRFAPEAWYAGARELSEVEMERLFFFGDPKVQPGPYSGSVD 760 Query: 816 ---AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL 872 + F + + L RF + F L+V E Sbjct: 761 LDTQRESLRETFRFDITRPLSASALARFGNCGFQGFLSYGLKVAEPDVPGE-------EF 813 Query: 873 EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 + R +++ + ++L G P E+ ++ Sbjct: 814 DARGRGTFWHKVVEEVFAALKEKQLL------GKAPEEVPDEVLDAALKAAIKDF 862 >UniRef50_A8R903 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=A8R903_9FIRM Length = 729 Score = 95.9 bits (237), Expect = 9e-18, Method: Composition-based stats. Identities = 63/443 (14%), Positives = 135/443 (30%), Gaps = 80/443 (18%) Query: 342 ILELENRAVAGVNIEEFSRSDNKR--------PLDPLDSSITFHVCHSPQREVEVLHDRL 393 IL R+ + N R + D I E + ++ Sbjct: 276 ILNENYRSTQPILQASNELIKNNRNRIEKELFTRNESDERIVHFTAMDDYNEPIWVAGKI 335 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 L++ + RDI V+ S ++ A D+++PY I ++ Sbjct: 336 LSL--HHNGVKYRDIAVLYR-----SNYLSRGLEKALLDQHIPYRIYGGVRFYDRAEIKD 388 Query: 454 FISLLSLPDSRFVSED--VLALLDVPVL--AARFDITEEGLRYLRQWVNESGIRWGIDDD 509 +S L L + +D + L V + + I + L L Q Sbjct: 389 ALSYLRLLAPKVEGDDKELFKNLAVKRIINLPKRGIGAKTLETLEQ-------------- 434 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 A ++ + G E + ++ Sbjct: 435 -------------------------EAAAKDTNMYEILKQGGFGKGKAKESIAKFVEVIE 469 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 ++ ++ L + L ++ ++ +A + +E + I + Sbjct: 470 ACRSCVDTISIDQLLSKVLE------DSGYMEMLRNDAEIERLENLKELISDIANYVENN 523 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 L E++ D+E + V + T+ + + F V + + DG++P + Sbjct: 524 PDGSLLDYLQEISLYSDKEDLDNGEF---VQLMTIHAAKGLEFDRVFVYSLCDGIFPNER 580 Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI--SYIGRSIQDNSERFPSVL 747 + G + +++R L A A+++L++ SY G S + + S Sbjct: 581 SIN----------EGGQQALEEERRLAYVAFTRAKKQLFLSDSY-GYSYVLDKLKTTSRF 629 Query: 748 VQELIDYIGQSHYLPGDEALNCD 770 V+E+ Q + D Sbjct: 630 VKEIPQDCLQEVGAKPRNSFASD 652 >UniRef50_D2PLA6 UvrD/REP helicase n=2 Tax=Nocardioidaceae RepID=D2PLA6_9ACTO Length = 1079 Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 102/716 (14%), Positives = 206/716 (28%), Gaps = 94/716 (13%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 S IL N + + + P + +IT + + +E+E + D ++A + Sbjct: 367 SRILAAANEHATELYEQHPGVIPLEAPDGAPEGAITVGLFETRSQEIEWIADSIVAA-HK 425 Query: 400 DPTLTPRDIIVMVA-DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 P +DI +++ ++D + AV A R +P + + P + ++ L Sbjct: 426 TPNRRWKDIGILMRTNVD-----LSAV-HEALIARKVPVEVVGLGGLLALPEVVDVVATL 479 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + + +L +L P R+ I L L D + + Sbjct: 480 QAVNDLTANAAMLRILTGP----RYRIGHRDLALLANRSRALA-----DGGDRPAADDLV 530 Query: 519 TGQHTWRFGLTR---MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 G+ + L A++ P G E + L +L R Sbjct: 531 AALDAAVAGMDSTEVISLAEAVDD---------PGPAGWGYSPEALERFQELSTELRELR 581 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE---GLGAQYGDAV 632 + L + + + A + + A + + + ++ Sbjct: 582 AHAGEP--LLDLVRRVISTIGLDVELTATPDHVDSGRRDHLAAFLDAVGNFVSTESDGSL 639 Query: 633 P-LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 L + ++ A V + T + + + VV + + + V+P Sbjct: 640 DGLLAYLAAEEEYAAGLDLAVPSEADSVKLLTTHRSKGLEWPVVFVPTLVNKVFPSDRGR 699 Query: 692 LGFDLMSQK---PKRGDRSRR-----------------------DDDRYLFLEALISAQQ 725 + ++ P RGD ++R L A A++ Sbjct: 700 DKWTTNAKVLPWPLRGDADTLPDFHDLSNAGLKAFSDECKQVNSLEERRLGYVAFTRAKE 759 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 L + R PS ++ L + G + +E+ + T Sbjct: 760 VLIATGHWWGPTQKRPRGPSAYLEMLKKHAGDRVIAWAPQPELSEENPELAEQ--TQAAW 817 Query: 786 RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPL--ETLQRFWAH 843 P+D + Y R+ L ++A +E + L TV L+R + Sbjct: 818 PAPYDAEAY----RRRLEGAALVQQARAEGPSAEAEESLLLDEQATVARWDSELERLLSE 873 Query: 844 PVRAFFQMRLQVNFRTEDSE--------IPDTEPFIL-EGLSRYQINQQLLNALVEQDDA 894 + + V S PD L + R Sbjct: 874 ARESRSRKAYDVELPRTLSATQVMRLAKDPDGLATELARPMPRKPNRAARFGTRFHAWVE 933 Query: 895 ERLFRRFRAAGDLPYGAF--GEIFWETQCQEMQQLADRVIACRQPGQSM---EIDLACNG 949 ++F D GA G + + M RV + L+ G Sbjct: 934 SYFGQQFLLDPDDLPGAADEGIVDDTDLTELMDAF--RVGPYGEKAPYEIEAPFALSIGG 991 Query: 950 VQITGWLPQVQP---------DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGES 996 + G + V ++ W+ S A +QL + + + G + Sbjct: 992 RVVRGRIDAVYQVVRPDGSRGYDVVDWKTSRSETADPLQLAIYRVAWAELLGIPLT 1047 >UniRef50_A5HZM6 ATP-dependent DNA helicase n=4 Tax=Clostridiales RepID=A5HZM6_CLOBH Length = 884 Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 72/580 (12%), Positives = 174/580 (30%), Gaps = 99/580 (17%) Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 + +E + +++ +++ + ++I ++ + ++ A +PY + Sbjct: 332 NIYKEANWIINQIEQIIK--GGNSYKNIAILYR-----AHYVSRSIEEALLKNKIPYTLY 384 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 ++ +S L + V E+ L ++R Sbjct: 385 SGVEFYQRKEIKDILSYLRMV--------VF---------------EDDLSFIR------ 415 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRM--LLGYAMESAQGEWQSVLPYDESSGLIA 558 + ++ FG RM + YA ++ + S+ E + Sbjct: 416 --------------IINEPKRN---FGKKRMEIIRKYAEDNNCSLYSSLKINLEDKLIAK 458 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 L+ + + + L E L A E E + + + + Sbjct: 459 SKADKFVDLIERYKKIYKEMRITDLLMELLNN--SGYEAMLRESGEDER-LENLAELKNS 515 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 I A + D L + + +N+ TL + + F V + Sbjct: 516 ISDYENSAGEDTTLE-----DYLQEISLFTNSDLKENKDTINMMTLHTAKGLEFPYVFIC 570 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 N+G++P + + + +++R L A+ L++S D Sbjct: 571 EFNEGIFPSA-------------RTNTKEKMEEERRLAYVGYTRAKNALFLSDAEGVNYD 617 Query: 739 NSERFPSVLV----QELIDYIGQSHYLPGDEALNCDESEARVKAH---------LTCLHT 785 S RFPS + + ++Y+ + D+A +H Sbjct: 618 GSYRFPSRFIFNTGKTYLNYLVELKESLIDDANEFISDSENSMNKSNNIKFKIGERIIHK 677 Query: 786 RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPV 845 + + SY + +T L+ ++ + Sbjct: 678 LLGLGVIIGIDNDNSSY-----MIKFDNAETFRNISFSTQLDKADTNNLDIIKSNERKAI 732 Query: 846 RAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAG 905 RL+ + ++ + E E + ++ + L A ++ + R Sbjct: 733 DHLEAERLEAERKEQERL--EAERLEAERKEQERLEAERLEAERKEQERLEAERLEAERK 790 Query: 906 DLPYGAFGEIFWETQCQEMQQL-ADRVIACRQPGQSMEID 944 + E + +E ++L A+R+ A R+ + +E + Sbjct: 791 E--QERLEAERLEAERKEQERLEAERLEAERKEQERLEAE 828 >UniRef50_Q6ZHK2 Os07g0492100 protein n=4 Tax=Poaceae RepID=Q6ZHK2_ORYSJ Length = 1165 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 64/506 (12%), Positives = 148/506 (29%), Gaps = 91/506 (17%) Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS----SITFHVC 379 D+F P++ + + A + + L D+ I C Sbjct: 557 DSFRRDFPNHKEVRLSKNYRSTRAIVEAATALIHNNTKRQSHKLAETDNPSGNKIIVKEC 616 Query: 380 HSPQREVEVLHDRLLAMLEED-PTLTPRDIIVMVADIDSYSPFIQ-AVFGSAPADRYLPY 437 HS + + D+++ I V+ Y I F ++ +R +P+ Sbjct: 617 HSEDSQCAFVIDKIIETTSSSVEGCHFGKIAVL------YRRQITGKAFQASFRNRKIPF 670 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 I A V++A +++L ++ Sbjct: 671 NI-HGVAFYRKKVIKAIMAILKTTLPGC---------------------DDDAP------ 702 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 L + + ++ L + S Sbjct: 703 --------WHQAFKAILPGDKEEKKKIIHHIEKISLARKCSFISAAT-DIFSAKVSGTFK 753 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA------------ET 605 + +L L+ + + +E+ + + DML +L + Sbjct: 754 RAQITQGRKVLSALDSLSKLVEREQSVSVVISSAGDMLPQKYLLEKRAIVDADGGKLLNE 813 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVP------------LSLLRDEL-AQRLDQERISQ 652 + + + Q +++ L + +V L D + + + R + Sbjct: 814 DNDIRSVLQFLMDDVSDFLSTHFSSSVDTSKTEEKGCASTLKAFIDYISLRETENFRSRK 873 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 + + T+ + + + VV ++ ND P G + S +++ Sbjct: 874 EENKNSITLTTIHQSKGLEWDVVFIVQANDSEIPLLHEYNG-------TVKEAGSTLEEE 926 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI---------GQSHYLPG 763 R LF A+ A++KLYI ++ PS ++E+ ++ ++ P Sbjct: 927 RRLFYVAMTRARKKLYILHVTVDSNR-QLLQPSRFLREIPAHLLEVQGEGTVRRTPEQPV 985 Query: 764 DEALNCDESEARVKAHLTCLHTRMPF 789 + + E + V+ + + PF Sbjct: 986 NIPFDQPEGDTSVERPMVVRNETSPF 1011 >UniRef50_Q67LG5 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67LG5_SYMTH Length = 671 Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 65/435 (14%), Positives = 123/435 (28%), Gaps = 74/435 (17%) Query: 322 ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHS 381 E + LL + A + R P + H + Sbjct: 288 EFERHFPGARTILLEQNYRSTGAIIRAANRLIAHNAGQRPKRLFTAAPEGRPVVAHEAET 347 Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD 441 E + + R+ A + D ++ P F + +PY + Sbjct: 348 EVDEAKWVVQRIRA--GAEAGRRWGDFAILYRTTAQGRP-----FEEELREASIPYQVVG 400 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 ++ ++ L L + S + +L+ P R I E GL+ L + G Sbjct: 401 GPRFYDRREVQDSLAYLRLVHNPRDSVSLERVLNAP----RRGIGERGLQRLLALAAQRG 456 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 + ++ + + +G Q E Sbjct: 457 VD---------------------------LIAALRVAADEGVLQD------------EAA 477 Query: 562 GHLASLLMQLNIWRRGLAQE----RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 L L R L ++ E L L D E + + + Sbjct: 478 AGARQLHDHLRRAREALERQPGRFAAAMERLLRESGYLAYLQEEDRRKEERRSEVVESLI 537 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 A + E + L L + + E V + T+ + + + VV + Sbjct: 538 AAMHEFERRSPDGGLGAYLDHLALLEGQEDESGG-----DVVKLQTIHSAKGLEYPVVFV 592 Query: 678 LGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ 737 +GM G+ P Q A +L +++R L A+ A+++LY++ Q Sbjct: 593 VGMEQGLLPYQRALEEGNL-------------EEERRLCYVAITRAREELYLTGARVRWQ 639 Query: 738 DNSERF--PSVLVQE 750 PS + E Sbjct: 640 RGEMVLTTPSQFLSE 654 >UniRef50_C0GCZ6 ATP-dependent nuclease subunit B-like protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GCZ6_9FIRM Length = 1004 Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 73/619 (11%), Positives = 162/619 (26%), Gaps = 85/619 (13%) Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 P +T + E+ + L + +E+ L D V+ Y P I Sbjct: 236 PQNSPQPPELTILRAYGQTNEIRQV---LRHLQQENIPL---DNAVVCHTSTKYIPLILT 289 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 + A + +P ++ + L+ + R+ S + L+ + Sbjct: 290 I----TASQNIPVTFAEGIPLGFTRPGRFTLQLIRWIEERYTSLILHQLMTSGDMRLTSA 345 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 T+ + + ++ I W + + + ++ Sbjct: 346 TTQA------RLLRQANIGW---------------ERSRYIPCTESLHQSILQKATAATN 384 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWR-RGLAQERPLEEWLPVCRDMLNAFFL-PD 602 + PY + AE V L L Q+ + + + Sbjct: 385 EGNDPYAQYLHQQAEHVSTLKQTLTQIFSRIPDATDGNVSFPKLCRGISQTTSTYARISS 444 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-AGPVNI 661 A+ I+ + +PL L Q LD + G ++I Sbjct: 445 PTDGLALAAIQDTLTEAAHA-----FSGTLPLREALRRLHQVLDTLHTAASPPKPGHLHI 499 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR-----DDDRYLF 716 L V ++G+ D +P L ++ + +Y Sbjct: 500 TGLNQAAFTHRPVTFMVGL-DANFPGSGLQDPVLLDQEREQIHPELSLLTHEPAKRQYRL 558 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY-----------IGQSHYLPGDE 765 L S + ++ +SY + P+ ++ + + +S P Sbjct: 559 ARYLSSRRGQIILSYPSYDTVEGRHTSPAAILLQAHRLQTNNPTADYSALQESLTTPAGF 618 Query: 766 ALNCDESEARVKAHLTCLHTRMPFDPQN-------YQPGERQSYAREWLPAA---SQAGK 815 + ++ T N Y A + G+ Sbjct: 619 LAPSPDQFTTLEEWWLTT-TLKNLSAHNINTVTACYPHIASGLEAHQHRAGTDFTPYDGR 677 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 + + + T+ + P F + L++ + P T L+ L Sbjct: 678 VDPDLDRDPRISQTLTLSATQFENLANCPFGYFLRYVLRIQPPEDAEYDPGT---WLDPL 734 Query: 876 SRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR 935 +R + + + Q + P +T + L ++ Sbjct: 735 TRGSLLHDIYCTYLRQTHNPDNPQ--------PPNK------QTLLSIAEDLINQTKQTL 780 Query: 936 QPGQSMEIDLACNGVQITG 954 P M + + + G Sbjct: 781 PPPSDMVFEHEKEEL-LRG 798 >UniRef50_Q82SW8 Putative uncharacterized protein n=1 Tax=Nitrosomonas europaea RepID=Q82SW8_NITEU Length = 909 Score = 94.7 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 97/644 (15%), Positives = 180/644 (27%), Gaps = 138/644 (21%) Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP- 436 C + E+ + LEE+P I ++V ++ + I + L Sbjct: 234 ACADGRDEIRQAARWIRQRLEENPAAR---IALVVPELAAQREMICQTLDEVLIPQALQP 290 Query: 437 --------YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 Y +S + +P + + +L L ++ V +L +A Sbjct: 291 EHHDRVRSYNLSLGKPLDRYPPVSLALDVLGLSETVIELPHVSRVLRSSFIAGGD----- 345 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 E R +D E W L ++L A Sbjct: 346 ---------REMNARALLDARLRESGE--------WNLTLQKLLTNAARSGQPY----SC 384 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP-DAETEA 607 P LA L L + EW L A P + + Sbjct: 385 PL-------------LAECLSNLMKQVKVSLAPTSPGEWAQRFGQWLKAIGWPGERGLSS 431 Query: 608 AMTLIEQQWQAIIAEGLGAQYG-DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + Q WQ ++ E + +V L+ +L + PV + L Sbjct: 432 EEYQVIQAWQGVLREFSTLDWVIRSVSLTEALQQLRHMVAGTIFQPESAEAPVQVLGLFE 491 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR--SRRDDDR--YLFLEALIS 722 + F + ++G++DGV+P P F ++ + + S R + R L+ + + Sbjct: 492 TSGLQFDYLWIMGLHDGVFPASSRPNPFLPLTLQREVDAPHSSARRELRVAAALLQRITT 551 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 ++ ISY R + + S L+ + + A Sbjct: 552 NATEVVISYPQR--KGDEILDSSPLIDAFPALSEEMLAMGTQSAWRDS-----------V 598 Query: 783 LHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWA 842 H+R + ++ +P S+ K + A Sbjct: 599 YHSRQ---QEVLSEDVAPTFVGTGIPGGSKLFKLQA-----------------------A 632 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL------------------ 884 P RAF ++RL L L R + ++ Sbjct: 633 CPFRAFAELRLVARPLGRIQI-------GLNALVRGTLLHRVMEMVWAELDSLAALANLS 685 Query: 885 ---LNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSM 941 LNALV E ++ FGE + + + L + + Sbjct: 686 PGELNALVAGKVNEAIYEIAPRY----PHTFGERLQALESKRLHALVLAWLEMEKQRPPF 741 Query: 942 EI-------DLACNGVQIT---GWLPQVQPDGLLRWRPSLLSVA 975 + +L NG++I + ++ G L V Sbjct: 742 RVSGREMETELELNGLRINLRIDRIDTLEEGGELLIDYKTGEVK 785 >UniRef50_A5I1P6 ATP-dependent DNA helicase n=14 Tax=Clostridium RepID=A5I1P6_CLOBH Length = 670 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 42/396 (10%), Positives = 135/396 (34%), Gaps = 81/396 (20%) Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + + + D +I + + + E + + +++ +D+ ++ Sbjct: 288 KLRNNKRIEAYNDYDKNIVLKSFLNEREQAEEISKIINDIIK--KGYGYKDVAIL----- 340 Query: 417 SYSPFIQAV-FGSAPADRYLPYAISDRR-ARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 Y +++ + +P+ + D+ +H V ++ + + + + L ++ Sbjct: 341 -YRTNMESRSLTDLFFKKRIPFRLLDKGYNFFNHFVCRDILAYMQVCIDSYDKKSFLKII 399 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + P I++ + +R++ D ++ P Sbjct: 400 NKPF----RYISKLNVERVRRYKYAKN---SFDILKEQKDIQP----------------- 435 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 + +++ + + + ++ S A + L E ++E+ + Sbjct: 436 FQIKNLENLEKDINKMNKMSAQDA------------IGHIIHNLGYEEYIKEYSERIKI- 482 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 + + I + + E Y + + +E+ + ++++ I++ Sbjct: 483 ----------DKEELLQIVDELKEAAEE-----YTSILSFLVHVEEVEKEINKKEINE-- 525 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 V + T+ ++ + FK V ++ N+G P A ++ +++R Sbjct: 526 --DSVILSTIHGVKGMEFKNVVIVNCNEGNIPYSKADEEVNI-------------EEERR 570 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 LF + A++ LY++ + + S ++E Sbjct: 571 LFYVGITRAKENLYLTVPK--VIRGKNKENSNFIKE 604 >UniRef50_B5VVV9 ATP-dependent nuclease subunit B-like protein n=3 Tax=Arthrospira RepID=B5VVV9_SPIMA Length = 883 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 59/588 (10%), Positives = 156/588 (26%), Gaps = 98/588 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + H+ + + E+ + ++ ++ + ++ I+++ D +Y+P + + + Sbjct: 233 VQCHIYPNLEAEIRGVLSQVKQLIID--GVSASKIVLVTQDEKTYAPLLLDI----AWEY 286 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 LP + + ++ + L+ + ++ F E LL P+ Sbjct: 287 QLPLRLFYKIPLRNIRLGYWIALLIEVIENNFPFESTAKLLHHPLARYL---------TY 337 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 +QW+ R L GL LL + W Sbjct: 338 KQWLEA---------RQKRPNNLAEWE----ELGLNLSLLKFPQSDTLPNW--------- 375 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 + ++ + + +W A +E Sbjct: 376 --------------VDRIKQVLKFFDIRKNSSQWSREIV---------------AFNQLE 406 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 W + GD + ++ + + + ++ + G + + T + ++ + Sbjct: 407 TAWLEL-----SKLDGDRLNRQEFFQDILEIITKLKVPMQPGKGGIEVHTPLSLQGASYP 461 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG--------DRSRRDDDRYLFLEALISAQQ 725 V L+G +G+ P + + + + F E L + Sbjct: 462 HVFLIGFQEGILPAAIENDPVLDFYESRRLSQFNITLETAIDIAQRNELCFYELLRIPTK 521 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 L S + + PS L + + + Sbjct: 522 SLTFSCAEQHHK--KPLLPSPYSTRL--------GIETTPPPLLNLASIEEARRYYLQQP 571 Query: 786 RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPV 845 +++ E + ++ + + L P Sbjct: 572 YQ-LSNDVIVNDIIKNWQVEQRRESGESPDEYDGVIGIGVDYQNRIFSASQLTALGQCPF 630 Query: 846 RAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAG 905 + F L + +E + G R ++ + L L++ + RR Sbjct: 631 KWFATYLLCLKEPSEAEA-------EITGSLRGRLYHRCLEILLKDIKTQTDLRRLDIQD 683 Query: 906 DLPYGAFGEIFWETQCQE-MQQLADRVIACRQPGQSMEIDLACNGVQI 952 + E + + + + +E++L + Sbjct: 684 INQALSQAEAALQAEENVNFDKFIGWEARRLEGLNMLELNLQAEDFLL 731 >UniRef50_B1AJE0 ATP-dependent DNA helicase PcrA n=15 Tax=Ureaplasma RepID=B1AJE0_UREP2 Length = 743 Score = 94.3 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 62/414 (14%), Positives = 143/414 (34%), Gaps = 75/414 (18%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFH-VCHSPQREVEVLHDRLLAMLEED 400 IL NR + N + N + D+++ + +P E + ++ +LEE Sbjct: 296 ILNTANRLIDANN---NNYKKNLTAFNTNDNNLPIYLRGQNPIDEANWIARKIRELLEEG 352 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 I V+ + YS I+ + +PY I + ++ I+ L + Sbjct: 353 TPA--NQIAVLFRS-NHYSRTIE----QSMMRESIPYTILGSKKFYERAEIKDMIAYLKV 405 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 + L +++ P R I +++ Sbjct: 406 VN-DLDELSFLRIINTP----RRAIGPTTFEHVKH------------------------- 435 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 YA+ + ++++ +++ + ++ + + + R + + Sbjct: 436 --------------YAINNNLFLFEALAEVEKNHLINNTQKKNILNFVNLIKEIRDEM-E 480 Query: 581 ERPLEEWLPVCRDML--NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 + + E L + + A+ L + + E + + + +A+ Y D P + Sbjct: 481 DLKIHEILELIYKKVNYEAYLLENEKAEDKIDNVYELKRAM------KMYVDRHPDDTIN 534 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 D L + V + T+ + + ++ V + GMN+G+ P A ++ Sbjct: 535 DYLNSIALYLNKDGKDSKENVLLMTVHNSKGLEYENVFVAGMNEGLLPSDRA------IN 588 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI-GRSIQDNSERFPSVLVQEL 751 P +G +++R + AL A++ LYIS + F S + E+ Sbjct: 589 DDPIKG----VEEERRIAYVALTRAKKNLYISSACCYDPLARRQVFESRFINEI 638 >UniRef50_Q9S3U7 Rep helicase n=2 Tax=Gammaproteobacteria RepID=Q9S3U7_LEGPN Length = 467 Score = 94.0 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 68/515 (13%), Positives = 142/515 (27%), Gaps = 87/515 (16%) Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE-QDVGNPLLAS 302 C YW + + + ++L R + P + Sbjct: 2 CMEYWQNKIRHLLVDEYQDSNSSQYLLVKKLAGVRAHFTVVGDDDQSIYAWRGAKP--EN 59 Query: 303 WGKLGRDYIYL-LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 +L +D+ L + LE + + +LH I ++ + + Sbjct: 60 LAQLQKDFPRLKIIKLEQNYR-------STSRILHAANHLIAHNQHLFEKKLWSDLGHGE 112 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 + C Q E E + + D ++ Y Sbjct: 113 L-----------LRVVSCKDEQDEAEHVIAGFGRAINYVIGQKYSDYTIL------YRGN 155 Query: 422 IQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 QA +F +PY IS ++ + + + L L + L + P Sbjct: 156 HQARIFEKVLRHHGIPYHISGGQSWFAKLEVRDIFAYLKLLCNEADDAAFLRAITTP--- 212 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 + I E L L ++ GI D++ E A Q + + Sbjct: 213 -KRGIGESSLEALGRYAQSRGISLYHGSDHLALSEFVADKQRMIFHDFKLWMEDIKKRIS 271 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 L +D + +L + R ++W+ N + Sbjct: 272 SDSVLEHLRHDVDG-------------IDKLIFMNNVILPPRHKKKWIMY-GSFWNGLIV 317 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 L + W I + + + L ++ +L Sbjct: 318 C-----WIRNLNNRSWMLWIDWYWSIYWNNPMNLQVMWSQL------------------- 353 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 TL + + F + L+GM + + P +++ + +++R L + Sbjct: 354 -MTLHASKGLEFPFIYLVGMEEELLPHRVSIDD-------------DQIEEERRLAYVGI 399 Query: 721 ISAQQKLYISYIGRSIQDNSER--FPSVLVQELID 753 AQ+ L + + + + PS + EL Sbjct: 400 TRAQKGLCFTLAKQRRRAGELQDCVPSRFLDELPQ 434 >UniRef50_C7MBM9 DNA/RNA helicase, superfamily I n=2 Tax=Actinomycetales RepID=C7MBM9_BRAFD Length = 710 Score = 94.0 bits (232), Expect = 3e-17, Method: Composition-based stats. Identities = 62/413 (15%), Positives = 128/413 (30%), Gaps = 47/413 (11%) Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV-----PVLAARFDITEEGLRYLRQ 495 +R R + ++ ++L R E L L+ P L F + Sbjct: 302 ERNYRSTPEIVRMANTVLDGAQGR-TRETRLTLVSQREGGPPPLVESFPDDPAEADGIAD 360 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + + + G + L + + LT +GY + ++ Sbjct: 361 RIADL-VSQGRPASEIAILFRTNSQSEAFEQALTFRGIGYLVRGGDRFFERQEVRRAMVS 419 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 L A + QL+ R RD+L+ E + + Sbjct: 420 LRAATR------VEQLDPAR--------------AVRDILSQQGWSPTAPETTGA-VRDR 458 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 W ++ A P + + D + + ++ + V + ++ + + + VV Sbjct: 459 WDSLNALVGLTDTVTTRPGTTMVDVVRELEERAEAQAAPVVDGVTLASVHAAKGLEWPVV 518 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 ++G +DG+ P +A + +++R LF AL A+ L +S+ Sbjct: 519 FVVGASDGLLPISMAKT-------------PAEVEEERRLFYVALTRARDLLTVSWAAAR 565 Query: 736 IQDNS-ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM--PFDPQ 792 R PS + ++D+ PG A V A + P + + Sbjct: 566 TPGARGSRKPSRFLDGVLDHPDAPRPSPGAGPRRTGRRSATVYAECRVCGQGLVSPREQR 625 Query: 793 NYQPGERQSYA-REWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHP 844 + S A + L A + + P+ + L+ + P Sbjct: 626 LGRHEGCPSAAGPDLLAALRTWRREQARQQGTAPYAILTDAALDAVAE--RCP 676 >UniRef50_C7MAK0 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=C7MAK0_BRAFD Length = 932 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 70/449 (15%), Positives = 127/449 (28%), Gaps = 43/449 (9%) Query: 322 ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHS 381 E + +L + A + + E R N IT +V Sbjct: 384 EFEQDFPSARTIVLEQNYRSTQNILAAANSVIEENEGRRKKNLWTDQGEGEQITLYVADD 443 Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAIS 440 Q E + ++ A++ D DI + Y Q+ LPY + Sbjct: 444 EQAEARYIGRQIDALV--DDGRRAGDIAI------FYRANAQSRALEDQLIRIGLPYRVV 495 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 ++ I+ L + + ++ +L+VP + I + + Sbjct: 496 GGTRFYERREIKDAIAYLQVLANPADEINLRRILNVP----KRGIGDRAEAAVAMLAERE 551 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRML----LGYAMESAQGEWQSVLPYDESSGL 556 I G + R E P + T + L G + + + SG Sbjct: 552 RI--GFGEALRRAEEAPGIATRSLNAVRTFVAMLEDLQQMAADGDGPAELLEAILQRSGY 609 Query: 557 IAELVG--------HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA-FFLPDAETEA 607 AEL G L +L +++ AQ + D +A Sbjct: 610 YAELQGSDDPQDESRLENLAELVSVAAEFEAQAEEEDALASEYEDEADAPATDTPGTEAP 669 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP-VNICTLMP 666 I + D + R L + V + TL Sbjct: 670 ETEAPGAPGADIAPDAALTAPDDPEASLVDRFLEKVSLVADADQIPGEEDQFVTLMTLHT 729 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F VV L GM DG +P D +++R L + A++K Sbjct: 730 AKGLEFPVVFLTGMEDGTFPHNRT------------LSDPEELEEERRLAYVGITRAREK 777 Query: 727 LYISYIGRSIQDNSE--RFPSVLVQELID 753 L+++ S + E+ + Sbjct: 778 LFLTRAQMRALWGQTQFMPASRFLDEVPE 806 >UniRef50_C7QE44 UvrD/REP helicase n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QE44_CATAD Length = 1134 Score = 93.6 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 80/515 (15%), Positives = 156/515 (30%), Gaps = 53/515 (10%) Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEE---DPTLTPRDIIVMVADIDSYSPFIQA 424 +P++ S+ +P E+ D ++ M+ + + +I V+V P ++ Sbjct: 376 EPIEGSVQVFTFPTPNTEL----DNIVDMVRRAHLEDGVPWDEIAVLVRSATRSIPALR- 430 Query: 425 VFGSAPADRYLPYAIS-DRRARQSHPVLEAFISLLSLPDSRFVSE-DVLALLDVPVLAAR 482 A +P S D + P + + L + D+ DV L L Sbjct: 431 ---RALIAAGVPVDTSGDELPLAAEPAVAVLLQALRVADNEAALTPDVARALLSGPLGGM 487 Query: 483 FDITEEGLRYL----RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT--RMLLGYA 536 L + N++G+R G+ ++ + A G+ +LL A Sbjct: 488 DAFELRKLARALRAEERAANQNGVR-GVPAEHSAVVPELARITEPSVNGVRPSEVLLREA 546 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLM-------QLNIWRRGLAQER---PLEE 586 + E + + L+ +L L G ER Sbjct: 547 LAEPARLVAMDEDVAEPARRLGMLLLRTRQILRGGGSVERALWELWSGGGDERDRNRAHR 606 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 W + + + + A + + D AQ L Sbjct: 607 WPERLERTAQRGGNTGRAADRDLDAVCVLFDYAARAEDRATGRGV--RNFIADLEAQELA 664 Query: 647 QERIS-QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF---------DL 696 + ++ Q G V + + + + ++ V + G+ DG++P L Sbjct: 665 GDSMAAQSSRGGAVRLMSAHKSKGLQWRFVIVAGVQDGLWPDLRLRGSLLQADLIGRNGL 724 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI--GRSIQDNSERFPSVLVQELIDY 754 S + + ++R LF A A+++L ++ + D + PS V EL Sbjct: 725 RSMEEIPTASTLLAEERRLFYVAATRARERLVVTAVDSALIGDDAAAEAPSRFVYEL--- 781 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG 814 + L A L R+ DP++ + + R A +QAG Sbjct: 782 ------GVEVQPLPGLRKRALAIPALVADLRRVLTDPKSSDQLRQAAAERLARLADAQAG 835 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 P V ++ P + Sbjct: 836 DGRPLVPSAHPDKWWGLVEETASEQPVRDPAKPLL 870 >UniRef50_A0LFK0 ATP-dependent DNA helicase, Rep family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFK0_SYNFM Length = 620 Score = 93.6 bits (231), Expect = 5e-17, Method: Composition-based stats. Identities = 53/402 (13%), Positives = 119/402 (29%), Gaps = 69/402 (17%) Query: 350 VAGVNIEEFSRSDNKRPLDPLDSS-ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 + I + K+ D +T ++ Q E E + DR +L D + R+I Sbjct: 284 ASDRLIAHNLQRIEKQCFSRRDGQPVTVETFYNEQMEAEWVADRCRELLN-DENIPYREI 342 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 ++ + P F A +PY + + ++ + L + Sbjct: 343 AILYRTKFTSLP-----FERALRSAGVPYTMVGAQGFFQRREVQDINAYLICAVNPSDDI 397 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 +++VP R GI ++++ + R Sbjct: 398 SFERIVNVP-------------------------RRGIGPGALKKIFGCKERNMSLRDAA 432 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 + + G + A + L SLL + + + Sbjct: 433 RKAIDGRLIPK----------------KAAAELDKLLSLLESIAE-----EKPDAAMHRV 471 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 D + + T +E I A + + L ++ Sbjct: 472 MKETDYFAHLSTLSDDGDDLETRLENIKSMIYDAAGKASIPEYLE--------DAALIRD 523 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 + V + T+ + + FK V ++ + +G+ P + + + + + Sbjct: 524 DQDETDNGNGVRLSTIHAAKGLEFKAVFVVAVEEGILPHRKS------IETESEIELERG 577 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 +++R L A+ A + L +S + + PS + E Sbjct: 578 MEEERRLMYVAMTRASELLSLS--AAATRRGELARPSPFLAE 617 >UniRef50_Q4A5L9 Atp-dependent helicase n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A5L9_MYCS5 Length = 734 Score = 93.2 bits (230), Expect = 5e-17, Method: Composition-based stats. Identities = 52/413 (12%), Positives = 130/413 (31%), Gaps = 66/413 (15%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 A A I+ +K + D I F+ + + E + + ++ +L++ Sbjct: 301 LASANKLIKNNKNRFSKDLITNNDEGNDIEFYHAFNTEAEAQWVISKI-KLLKKQKH-QI 358 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 ++I+++ S + F A + Y I + ++ ++ L ++ Sbjct: 359 KNIVILYR-----SNYYSRAFEDALLGEGINYKIFNGYKFYQRTEIKDVLAFLKTILNKD 413 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 + +++VPV I + + + + ++ I + Sbjct: 414 SI-ALKRIINVPV----RGIGPKTVEKIEAFAEKNKI--------------------SLY 448 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 L + E ++ + + L + + ++++ PL Sbjct: 449 DAL------------------FTHFKELPLGKEIILKKIYPFIKILRKY-QLISEKYPLP 489 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 + LN IE + +I+ + + + + L Sbjct: 490 VITQKLLEELNYLEQIKGNQNENQNAIEN-VKELISVSMKNYFETNKEATAIDYLNQVSL 548 Query: 646 DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 V++ T+ + + F V ++G+ +GV+P K K Sbjct: 549 LSTTGEDVEGDDFVSLMTIHASKGLEFDNVFIVGLTEGVFPNYKHLEDAKENKHKTKTEL 608 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP-------SVLVQEL 751 +++R L A+ A++ L++S S P S ++E+ Sbjct: 609 NKGIEEERRLAYVAITRARKNLFVS-----DSRGSVYAPIIHEKQTSRFIREM 656 >UniRef50_B7IGH4 Putative uncharacterized protein n=1 Tax=Thermosipho africanus TCF52B RepID=B7IGH4_THEAB Length = 1006 Score = 93.2 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 68/612 (11%), Positives = 169/612 (27%), Gaps = 80/612 (13%) Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + E+ + ++ ++ + P DI ++ +I I + Sbjct: 275 EVVGYKNVISEIVNVSGKVKKLILS--GVNPSDIAIVAPNIQ-----IAKQIAEKLDEMK 327 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P+ +S V++ + + E++ A L+ P + +T + + L Sbjct: 328 VPFNLSMNVKLSESKVVKMILQPFKTKYFGYDLENIFATLETPFV-DTLGLTMDEIESL- 385 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + + + + Q V E Sbjct: 386 ---------------FKEFSIEEGDFSKSIIEKINERIKELENVEDEDVMQQVEEKKEEY 430 Query: 555 GLIAELVGHLASLLMQLNI--------WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 ++++ +L L +++ + + +E+ L + V + + E Sbjct: 431 LKFSKVLENLFGLFEEIDKNINGDFLVFLKKFIKEKFL-DKFEVFNN--EEYISIIQEEI 487 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-AGPVNICTLM 665 +A+ + ++ + L ++ E V+I + Sbjct: 488 SALYKFSEVIDNLLQYN-----MGKTSWRNMFKILTSIVNAENYRLSPRKENAVDIVDVQ 542 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 R + + + DGVYP +P + + +R F+ +LI + Sbjct: 543 IARFVEKEYKFFVSAVDGVYPSFNVNPLILQTLSEPNKLKSFNEEVERRNFVLSLIFSSH 602 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 YISY PS+ E + +S Sbjct: 603 N-YISYPKA-TLSGDPVVPSIYAAEFGEIKEES--------------------------- 633 Query: 786 RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE--TVPLETLQRFWAH 843 D + ++ E + + + E + + + + Sbjct: 634 ----DERYILIDPEMIFSEEDKRIYEAYFGENKLILNEKFKSDAEIKRLSHSRISDYVSC 689 Query: 844 PVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRA 903 P+ +F+ + + ++D L Y + N ++ E + Sbjct: 690 PLYYYFKHVAGIRYYSQDKSNLYKGILYHRVLKNYFEKEISFNKEKIKNYVEEAYDEIYK 749 Query: 904 AGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDG 963 Y EI E Q++++ + + + ++I ++ L +V Sbjct: 750 EEFDRYKIPREINIEEFTQKLEEFIEGLFSES----YLKIGRKILEIKAIKSLEEVYKTH 805 Query: 964 LLRWRPSLLSVA 975 L R Sbjct: 806 SLFNRTVEFEAR 817 >UniRef50_Q4FPM1 DNA helicase II n=5 Tax=Bacteria RepID=Q4FPM1_PELUB Length = 678 Score = 93.2 bits (230), Expect = 6e-17, Method: Composition-based stats. Identities = 57/407 (14%), Positives = 136/407 (33%), Gaps = 83/407 (20%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + + + + E + D + L+ + +I ++V I F F Sbjct: 320 VKLNCFKNGKDEAIGVSDEIEKKLK--KKYSFNNIAILVRAI-----FQTREFEERFLKI 372 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 LPY I ++ ++ L L +++ P + I E ++ + Sbjct: 373 GLPYRILGGTKFYERAEIKDCVAYLRLIHQPKDDLAFDRIVNNP----KRAIGESTIKLI 428 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 ++ + + + +++ E + P + Sbjct: 429 HEFSKTNAV--------------------SLEIASKKLI----------EENLIKPKTKI 458 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF-------LPDAETE 606 L+S L ++ WR + ++ + + + +L+ D E E Sbjct: 459 G---------LSSFLFLMDKWRNDINIKK--INHVKLLQLVLDESGYSSMLKNKKDLENE 507 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + I++ A+ + + V L+ + Q + VN+ T+ Sbjct: 508 NRLENIKELLSAMKDFDNLENFLEHVALAT------------SVDQDWDGEKVNMMTMHG 555 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F VV L G +G++P Q + + +K + G +++R L + A++K Sbjct: 556 SKGLEFDVVFLPGWEEGLFPHQKS------IEEKGQNG----LEEERRLAYVGITRAKKK 605 Query: 727 LYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 IS+ + + S ++EL + + + D N ++ Sbjct: 606 ALISFAMNRFYQGNWIDSMASRFIEELPEKFLEKNSFFDDSKDNEED 652 >UniRef50_Q7NB99 UvrD n=1 Tax=Mycoplasma gallisepticum RepID=Q7NB99_MYCGA Length = 753 Score = 92.8 bits (229), Expect = 7e-17, Method: Composition-based stats. Identities = 57/475 (12%), Positives = 134/475 (28%), Gaps = 80/475 (16%) Query: 339 QSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 + IL L N A+ N F + D I + + + + + D++ ++ Sbjct: 303 KQSILNLANDAIKMNNSRYFKSLLSHDLTDLGPKPIWIN-FSNIEYQNRFVMDKIKELVA 361 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 T D ++ Y +V + +PY I ++ I Sbjct: 362 S-KQYTYGDFAIL------YRTNFSSVSLERLIKENRIPYEIFGGYKFFLRKEIKDLIGY 414 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L L D+ +++ P R I + + +++ N+ I Sbjct: 415 LKLVDTNNDI-AFDRIINTP----RRMIGDTSIEIIKELANKKSI--------------- 454 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 + E L + + + ++ L + Sbjct: 455 ----------------------TEYEALDYLDESNIKANVKKSAQNFKKMIEDLRANQGN 492 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 + + + E + +L + ++ E +G + ++ Sbjct: 493 WSVYQTINEIIKRINYY---DYLNEPTKHDSVNEFIDFLNKYEKEY-ENDFGTKLTINDF 548 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 LA D + + + T+ + + FK V ++ MN+ + P + + Sbjct: 549 IQNLALEGDLDNNQPNHNKNALKLMTIHSAKGLEFKNVFVINMNENILPSSRSIAATN-- 606 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYI-SYIGRSIQDNSERFPSVLVQELIDYIG 756 ++++ ++R + A A+ L++ S + PS + EL D + Sbjct: 607 -------NKAKLAEERRIVYVAYTRAKHNLWLCSNQDYDARTKEPYQPSRFLYELSDLV- 658 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 + H + D + + S W Sbjct: 659 --------------LDKQDQAKTYFDKHNFLTDDDGWFNSKKSPSKLDAWNSTNE 699 >UniRef50_C1E652 ATP-dependent DNA helicase n=2 Tax=Micromonas RepID=C1E652_9CHLO Length = 907 Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 54/378 (14%), Positives = 113/378 (29%), Gaps = 63/378 (16%) Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 + +DI V+ P + F A + + D + + L L Sbjct: 414 GVPLKDIAVLYRTHSQSRPL-EEAFIRAGVPHVV---VGDTAFYTRKEIKDLVAYLRVLF 469 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 +SR + +++ P I L L W +G+ W + Q Sbjct: 470 NSRDTVS-LQRIINTPP----RKIGPGTLEKLEAW--AAGLPW-----------VDGMPQ 511 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 L R ++ +LP GL A ++ + + + Sbjct: 512 PLGMALLDR---TWSTPDQD----DLLPPAADMGLAAGAYKAVSGFVSVMRELGEAVEVS 564 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY------------- 628 P V R + ++ D E ++ +I ++ + Sbjct: 565 DPGALTEEVVRRIGFEEYVADMENGDERVGYVKELVSIASDPSAVESLDGVDGGGAAGGG 624 Query: 629 ---------GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 L + ++ + E S+ A V + TL + + F V + G Sbjct: 625 DNGATKRKSTGHAGLGEFLEGISLLMSAETRSEDEGADAVKLMTLHAAKGLEFDTVLITG 684 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 D + P + D + D++ LF L A++KL++ + + Sbjct: 685 CEDELIPFKRGDAS----------SDAAEHDEEVRLFYVGLTRAKRKLFLCRAFKRQRFG 734 Query: 740 SERF--PSVLVQELIDYI 755 + PS ++ + + + Sbjct: 735 RTVYADPSPFLEVIRESL 752 >UniRef50_B6V2U6 Gp34.33 n=3 Tax=Bacillus phage SPO1 RepID=B6V2U6_BPSP1 Length = 978 Score = 92.4 bits (228), Expect = 8e-17, Method: Composition-based stats. Identities = 51/413 (12%), Positives = 117/413 (28%), Gaps = 71/413 (17%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 ILE+ N + + + D S H S E + + + + + E Sbjct: 602 PHILEVANNLIKNNQKRLPKKLVANKQNDETCVSFEVHE--SEIEEAKKVVEEI-KLQVE 658 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 P+DI ++ Y Q+ +PY I + ++ I L Sbjct: 659 QGGKNPKDITIL------YRTNAQSRALEDYLIISGIPYVIHGGTSFYERKEIKDLICYL 712 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 L E +++ P + + + +++ D + + P+ Sbjct: 713 RLVADSNDDEAFKRVINTP----SRYLGKAFMEKVKR----------FDGSHWEAITEPS 758 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + + + L+ +L Sbjct: 759 MSWKNYEQ--------------------------------KGINEFVDLVEELKSVAEHG 786 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 A + V +L+ + E + + + E L + Sbjct: 787 AGDFGEGSPTEVIDYLLDNCYKKHMSNELTSDDFSSRMENV--ETLKFVMEQHDSIESFL 844 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 ++ + Q + V + T+ + + F ++G+++G P A ++ Sbjct: 845 KHISDLMSQAKHDI----DGVQLMTIHKSKGLEFDTAFVIGVSEGCLPHFRAIESYN--- 897 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 G + +++R L A+ A+ +IS + S +EL Sbjct: 898 ----DGRKQAIEEERRLLYVAITRAESVCHISAPKTFL--GKPAPVSRFSKEL 944 >UniRef50_A2ST32 ATP-dependent nuclease subunit B-like protein n=1 Tax=Methanocorpusculum labreanum Z RepID=A2ST32_METLZ Length = 915 Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 84/643 (13%), Positives = 193/643 (30%), Gaps = 88/643 (13%) Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA-----PADRYLPY 437 + E+ + + A++E + P+DI ++ + S P + + R L + Sbjct: 212 RTELRSALESIAALIES--GVPPKDIALLTPSLPSALPLLDELVPDFSVLLEGTRRPLGF 269 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 + ++ P + ++ L+ +D+ +++ P F + ++ L R + Sbjct: 270 FAGEDIPIENLPPVRCALAWLAAFAFDCRIDDLKIIIESPY----FSLKKDWLTAGR--L 323 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 ++GI + G+ WR R+ E Sbjct: 324 EKAGI-----------ITKTEKGRAAWRTVAERLAA--------------ARKKEIGEHD 358 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 A L LL +L+ L L + L+A + + + Sbjct: 359 AAFQASLDRLLDRLD---ENLEHTGTLAGHCRALKADLSALGWTKIQMKPQDEAARHAFL 415 Query: 618 AIIAEGLGAQYGD-AVPLSLLRDELAQRLDQERISQRFLAGPVNI--CTLMPMRSIPFKV 674 ++ + + + + L R ++ + L + Sbjct: 416 RLLDKLALTSLAEVSYTVREFYAML-SRFCEKTTKISYPESKHAFFAGDLRSVAGTKRPY 474 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPK-RGDR--SRRDDDRYLFLEALISAQQKLYISY 731 V + G++ PR A + + + + DR + D RY F A ++A+++L +S Sbjct: 475 VFITGLSADRIPRIEAAIPLLNAQETARIQPDRVQNLLDASRYYFHAAGLAAEKQLILSC 534 Query: 732 IGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 G + PS + L + +S + A F Sbjct: 535 AGHDGE--KSLTPSPYLTRLAEPEPKSPGFLAHSMTANQTRAGELLAAGRENECEGLFGI 592 Query: 792 QNYQPGER----QSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP--LETLQRFWAHPV 845 + + ++ R P A A + E L+R+ P Sbjct: 593 PSLETAAEIIGIETVDRTGTPGIYDAEFAGDGIAEAFAAAYTEKTEFAPTVLERYRECPF 652 Query: 846 RAFFQMRLQVNFRTEDSE---------IPDTEPFI---LEGLSRYQINQQLLNALVEQDD 893 + + L++ + S E F + L+ + +++ Sbjct: 653 KWYLADHLRLENPADFSAERIIVGTVMHKAMERFFREYMSPLTEENESDA--AEFLKKLV 710 Query: 894 AERLFRR---FRAAGDLPYGAFGEIFWETQCQEMQQL--------ADRVIACRQPGQSME 942 E R + + G G E+ C + +L + + + E Sbjct: 711 TEEFKNRHIKTPSWQSMLNGYLGNGGLESSCDLIIRLETGFYAAGFRTLPEWLEQKVTAE 770 Query: 943 IDLACNGVQITGWLPQVQPDGL------LRWRPSLLSVAQGMQ 979 I + +TGW+ +V + + ++ + + ++ Sbjct: 771 IP-GGDPFTVTGWVDRVMFNEQTKEFAVVDYKTGNVKTWKELE 812 >UniRef50_B5K795 UvrD/REP helicase n=5 Tax=Rhodobacterales RepID=B5K795_9RHOB Length = 837 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 50/419 (11%), Positives = 118/419 (28%), Gaps = 68/419 (16%) Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 F LPY + + ++ L S+ +++ P + + Sbjct: 400 FEDRFLTIGLPYRVIGGPRFYERMEIRDAMAYFRLAVSQDDDLAFERIVNTP----KRGL 455 Query: 486 TEEGLRYLR--------QWVNES------GIRWGIDDDNVRELELPATGQHTWRFGLTR- 530 ++ ++ ++ + + G+ G + +REL H G ++ Sbjct: 456 GDKAVQTIQITARTNGVNLIEGARLCVSGGLIKGRGGNALRELVQGLDRWHATLHGQSQS 515 Query: 531 ----MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 + G + + + G LA +++ + E+ E Sbjct: 516 QSNGVTRGDMADDDESVIDDGPTVEVFDGASNVNHVELAEVILDECGYTAHWQNEKTPEA 575 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 + + + + L + ++ +D Sbjct: 576 ----------------PGRLENLKELVKALENFD------------SLQGFLEHISLIMD 607 Query: 647 QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR 706 + + V I TL + + F V L G DG++P Q + L Sbjct: 608 NAKDEE---DDKVTIMTLHGAKGLEFPSVYLPGWEDGLFPSQRSMDESGLKG-------- 656 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGD 764 +++R L + A++ IS+ + + PS + EL + + PG Sbjct: 657 --LEEERRLAYVGITRAEKHCTISFTSSRLVYGQWQSQMPSRFIDELPEENVEVLTPPGL 714 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 + +A+ + + S W S++ + + Sbjct: 715 YGGGFGAAGMSARANPVSEGIASTLHEKMAKADVYNS--PGWRRLQSRSQQRSMSQPKE 771 >UniRef50_UPI0001C37867 ATP-dependent DNA helicase PcrA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37867 Length = 786 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 51/431 (11%), Positives = 122/431 (28%), Gaps = 71/431 (16%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E + + + ++ D V+ +++ S I+ +PY + Sbjct: 382 EANFVAETIKKY-HKETG-RYADNAVLYR-MNAQSNAIE----RMLMKCGIPYRVYGGMR 434 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 ++ S L+ ++ +++ P + I + L + + Sbjct: 435 FFDRKEIKDVTSYLAFINNHNDMLRFKRIINEP----KRGIGDSTLALIEDISRDL---- 486 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 + ++ +T + Y M + LP DE + E G+L Sbjct: 487 ---KLSPFDVLKTCEEYAPLAKKVTSLRNAYEMFEDLTQKSEELPLDEFLDEVMEKTGYL 543 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 + + L E + R + + E + E Sbjct: 544 --------DYLKTLENADTKIENVQELRSSVVQYMNESEEP---------TLGGFLEEVA 586 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 L E V + T+ + + + + ++G++DG+ Sbjct: 587 --------------------LYTEADRDPETDDKVTLMTVHSAKGLEYDNIFVVGLDDGI 626 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF- 743 +P + D M +++R L A+ A++ LY++ + + + Sbjct: 627 FPSSRSFDSEDDM------------EEERRLAYVAITRAKKHLYLTNASQRMLFGQTQRN 674 Query: 744 -PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 S ++E+ + + H E + + T +N Sbjct: 675 VTSRFMREIGSELIEKHDNAAAMRSKLAEEDKSMTE--VHSATLQQQLARNKTKPAAPKE 732 Query: 803 AREWLPAASQA 813 A + A Sbjct: 733 AVTYTAGERVA 743 >UniRef50_UPI0001699040 hypothetical protein Epers_04977 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699040 Length = 154 Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 60/166 (36%), Gaps = 25/166 (15%) Query: 961 PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN----GESRLFLRKDGEWRFPPLAAEQA 1016 P GLL +RP L ++LW+ HL CA L + +D + A Sbjct: 3 PAGLLSYRPGKLKAKDRLRLWVNHLALCALRQQTAAEAPLSLHVAEDQTLILHSVEA--P 60 Query: 1017 LHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYE 1076 L+ L++ + +G APL + ++ ++ LQ+A + + ++ Sbjct: 61 GQLLADLLQAWWQGQCAPLPFFAAASLSFAESG-------------DLQRAIKVWEKDHD 107 Query: 1077 GNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS 1122 +R + P EA + R PL ++S Sbjct: 108 SGAPNW------AVSTAFRGMQPLAEEAFSGLATRLGGPLLAASES 147 >UniRef50_D1YBS1 UvrD/REP helicase n=3 Tax=Propionibacterium acnes RepID=D1YBS1_PROAC Length = 1085 Score = 91.7 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 89/682 (13%), Positives = 183/682 (26%), Gaps = 77/682 (11%) Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD---IDSYSPFIQAVFGS 428 ++ S R V + L D + R + V+ +D + + A Sbjct: 347 GTVAALRAPSITRLVRKIAGTLRHARVAD-GVAWRSMAVVTRHGGELDVIATILAA---- 401 Query: 429 APADRYLPYAISDRRARQSHPV-----LEAFISLLSLP-----DSRFVSEDVLALLDVPV 478 +P R+R H + + ++ L + ++ + DV LL P+ Sbjct: 402 ----EGIPV----LRSRDEHALSDIYAVTHILNALEMAVALASGAQPSARDVATLLSNPL 453 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 I + L W G+D D EL A T R Sbjct: 454 A----GIDRSVIHRLETWCRLV---RGVDVDWALLKELGADPTVTAAGKSERTDDASRSG 506 Query: 539 SAQGEWQSVL-PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC------ 591 A + L LA + ++ L E L Sbjct: 507 DAITAELDTACEVYSVPPSLRALAQPLAVMTQRVQRAADLLRSGATCHEALWALWQGSSW 566 Query: 592 -RDMLNAFFLPDAETEAAMTLIEQQWQ--AIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 + D+ + + + G G + + ++R Q Sbjct: 567 ASSLRRRAVAGDSTANRDLDGLCSLFDMAESAQTMAGIAGGQRL-IEVVRQ--EQIPADR 623 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK------ 702 V++ T ++ F VV + G+ +G +P G + + + Sbjct: 624 ARESDEDRDGVSVVTAHRIKGREFDVVAVCGLEEGNWPA-GNHTGSLVRADRWSPDGLVA 682 Query: 703 -RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 G + L L A A+ +L + S ++ PS LV L +I + Sbjct: 683 APGWSENLRAETRLLLVASSRARHQLLL-CSVDSAEEGK--RPSGLVAGLP-HIEDNADS 738 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFV 821 +L E R + + Q R Sbjct: 739 LSFASLTELVGELRRVIADESESPGVRTEAQALLDDLRNEEHHGRRLVPQADPATWWRQG 798 Query: 822 QPLPFTLPETVPLETLQ--RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL--EGLSR 877 P + + L P R F R + + + + E + + Sbjct: 799 VPRQDDMDGEIELSASHVGELLTCPRRWFMTRRAGASSGSAFRASIGSLVHRICAENMDQ 858 Query: 878 YQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP 937 + + + L L L ++ + +L ++ Q L +R + + Sbjct: 859 WSLPKALAE-LEAAWPEIELSAEWQRSAELADAKAAVQRFDGWLQ----LRNRQLIGTEV 913 Query: 938 GQSMEIDLACNGVQITGWLPQVQPDG-----LLRWRPSL-----LSVAQGMQLWLEHLVY 987 I + ++ G + +++ D ++ + + + +Q+ + V Sbjct: 914 RVDGTITVPSGTARVRGSIDRLERDAEGAYYVVDLKTGTSQSDEIKQSHRLQIGVYQAVV 973 Query: 988 CASGGNGESRLFLRKDGEWRFP 1009 + G + Sbjct: 974 ASGGVEAIGPTSVSGAELVHLR 995 >UniRef50_Q6AFN3 ATP-dependent DNA helicase n=4 Tax=Actinobacteria (class) RepID=Q6AFN3_LEIXX Length = 1125 Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 104/683 (15%), Positives = 201/683 (29%), Gaps = 114/683 (16%) Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 VF +A + +P+ + PV+ +S L + +++ LL AR+ Sbjct: 457 EVFTAALSRHRVPFHVLGLGGLLEQPVIADLVSALRVMHDPTAGSELIRLL----TGARW 512 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 + + + LR+ + W D+ + P R+ A E + Sbjct: 513 RVGPKDIAALRRVAS-----WLAGCDHRFQELEPDVR--------DRLRRSVAGEESASL 559 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE--EWLPVCRDMLNAF-FL 600 ++ E+ +L S + ++ R L Q R + L + + Sbjct: 560 VDALDFVVEAPEGHRQLSAFSGSGVERMRAAGRQLDQLRSRAGLDLLDLVTIVQQELRLD 619 Query: 601 PDAETEAAMTLIEQQWQAIIAE-GLGAQYGDAVPLSLLRDELAQRLDQERISQR---FLA 656 + L + A + D L LA+ ++ ++ R Sbjct: 620 IEVAANETAQLGQASLDAFAEQVASYLASDDRATLGSFLSWLAEAEKRDNLAPRSEDPEP 679 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL-------------------- 696 G V I T+ + + + VV + + +G P L Sbjct: 680 GTVQILTIHGSKGLEWDVVAVPRLVEGELPVPPQSRRGWLAFGQLPNEFRGDSAELPVLP 739 Query: 697 -------------MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF 743 ++ RD+ R L A+ A++ L ++ S Q R Sbjct: 740 WRTVEDQKALDGAIADFEAENLARHRDEQRRLVYVAVTRARESLLLTGSYWSTQS-RPRG 798 Query: 744 PSVLVQELI-------------DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 P ++EL D + P ++ + Sbjct: 799 PGAYLRELQGAGLIAGDAFPPCDDPEDNPLAPASRTVSWPLDPLGARRRSVETAAEAVRS 858 Query: 791 PQNYQPGERQSYARE-WLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 + G+ YAR+ L A +A + + LP +P + + + P Sbjct: 859 ARARGAGDGGVYARDLDLLLAERARRPSESGLVELPARIPA----SRFKDYVSDPA---- 910 Query: 850 QMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPY 909 + R E P + L L + ++ D+ + D P Sbjct: 911 --GVASALRRPMPERPYRQT-RLGTLFHRWVEERYGTVAGRADELDATAHEL----DDPA 963 Query: 910 GAFGEIFWETQCQEMQQLADRVIACRQPGQ-SMEIDLACNGVQITGWLPQVQP------- 961 G + E A A R P + +EI +A G + L V Sbjct: 964 GEI--LEAERLADLQATFAASEWAARAPDEVELEIHIALAGQVVVCKLDAVYRIADGRHD 1021 Query: 962 DGLLRWRPSLL------SVAQGMQLWLEHLVYCASGGNGESRL-----FLRKDGEWRFPP 1010 ++ W+ + +QL L L + G R+ F+ D R Sbjct: 1022 YQIVDWKTGRAPHDVGDLDRKQLQLALYRLAFAQYAGIEPERIDAVFYFVADDAVVRPSR 1081 Query: 1011 LAAEQALHYLSQLIEGYREGMSA 1033 L +E+ +L E ++ ++ Sbjct: 1082 LYSER------ELAERWQAAVAE 1098 >UniRef50_UPI0001C3187F UvrD/REP helicase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3187F Length = 746 Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 62/387 (16%), Positives = 113/387 (29%), Gaps = 74/387 (19%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPAD 432 I E + + ++ D ++ +I V Y Q+ V Sbjct: 326 IKVRELDDEHAEARFVAGEIERIV--DEGVSRNEIAV------FYRTNAQSRVLEDTLVR 377 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 + Y + ++ I+ L++ + + + P R I + L Sbjct: 378 AQIGYQVIGGTKFYERAEIKDAIAYLTMLVNPQDVVSFTRIANSP----RRGIGQTSLSR 433 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 + W N +GI W++ L D Sbjct: 434 VISWANTAGI---------------------------------------TIWEAALEPDS 454 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 GL + + I A P+ E L +A+ Sbjct: 455 VPGLGTAARKSFHRFMGAMRILGERAAANPPVSELLKEVLSESGYLEALEADRTIESQGR 514 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI-----SQRFLAGPVNICTLMPM 667 + + ++ + A+Y +V L LA L Q + +R G V + TL Sbjct: 515 IENLEELVN--VAAEYDGSVDLREEAPSLAGFLQQIALVADADGRRDDEGLVTLMTLHNA 572 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + + +V LLG +GV+P Q A L ++ L A + L Sbjct: 573 KGLEYPIVFLLGCEEGVFPHQRAIEEGGLEEERRL-------------AYVGLTRAMRDL 619 Query: 728 YISYIGRSIQDNSERF--PSVLVQELI 752 Y++Y S + S V E+ Sbjct: 620 YMTYARTRAVFGSRSYGARSRFVDEVP 646 >UniRef50_B2GL30 UvrD/Rep helicase family protein n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GL30_KOCRD Length = 1145 Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 108/786 (13%), Positives = 193/786 (24%), Gaps = 133/786 (16%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQ----REVEVLHDRLLAMLEEDPTL 403 + + PLDP ++ V S E + Sbjct: 378 PLRTAPAWSRSAATVEVPPLDPAPGAVRGRVRVSRYATDTEEARATAQLIHEQRAAHEGQ 437 Query: 404 TPRDI---IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 ++ V+ + P +PY + P + +++L + Sbjct: 438 PLAEMPTMAVLCRRRAQFEPL-----RLELEALDIPYEVVGLGGLLHTPEVSDVVAMLHV 492 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 S+ + LL AR+ + L L W E R Sbjct: 493 LTDPGRSDALARLLA----GARWRLGARDLAALGDWAAEL---------ERRHESAARGE 539 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV-----GHLASLLMQLNIWR 575 Q T ++ S+ E LP D + L +L + R Sbjct: 540 QDTRPD--DVVMADAVDGSSLVEALETLPRDGWVSSRGRSISPEGMRRLRALREDVVALR 597 Query: 576 RGLAQERP--LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV- 632 L E + E V + LP + A + A + + Sbjct: 598 EVLGDELTTVIHEVEAVLGLDIELAALPGEDPATA----RRNLDAFTDQAVQFSATTRTH 653 Query: 633 PLSLLRDELAQRLDQERISQRFLA----GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 ++ L +E A V + T+ + + + V + G+N G +P Sbjct: 654 DVAAFLAWLETASREENGLDLPPAHTRHDAVQLLTVHASKGLEWDHVHVPGLNQGDFPST 713 Query: 689 LAP---------------LGFDLMSQKPKRGDRSRRD----------------DDRYLFL 717 + L P+ D + ++R L Sbjct: 714 NSSAWTGEAAKLPWPLRGDASQLPEWSPRVDDVRELEASFGEFAEDVAEHDLGEERRLAY 773 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 A A+ L +S + S ++E D + Sbjct: 774 VAFTRAKTLLELSGSVYRGTGKKPKEVSPFLREARDMAESATPGFEAGPWADPGELEGNP 833 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFV---------------Q 822 T + P+DP R S + + + AH Sbjct: 834 QLDTRVSALWPYDPLEGPVITRTSRDADGTLSETVLPPAHEGRRARAEAAAQAVRNGGFP 893 Query: 823 PLPFTLPETV---PLETLQRFWAHPVRAFFQMR------------LQVNFRTEDSEIPDT 867 L E + R W H R V+ S D Sbjct: 894 HLADVPDEELAAGEAGARVRRWRHEAELLLARRSDPERPRTVHMPSHVSASALVSMDSDP 953 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDL--PYGAFGEIFWETQCQEMQ 925 E F+ R + ++ +A F L P G + ++ Sbjct: 954 EGFV--STLRRPMPRRPGSAARAGTAFHTWVENFYGDSALLDPDELPGADDHVDEDLDLP 1011 Query: 926 QLADRVIACR-QPGQS----MEIDLACNGVQITGWLPQVQ----PDGLLRWRPSL----- 971 +LA+ A Q + ++ + + G + V L+ W+ Sbjct: 1012 RLAETFRASPWAERQPYAVELPVETPVGSLTVRGRIDAVFRTADGWELVDWKTGRVPHGE 1071 Query: 972 -LSVAQGMQLWLEHLVYCASGGNGESRL-----FLRKDGEWRFPPLAAEQALHYLSQLI- 1024 L G L L + G + ++ D R PL L ++ Sbjct: 1072 DLRRKSGQLA-LYRLAFARLHGIPLESVSAAFYYVASDRVVR--PLDLAD-EQQLEGIVS 1127 Query: 1025 EGYREG 1030 Y G Sbjct: 1128 SLYARG 1133 >UniRef50_B9NIQ2 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NIQ2_POPTR Length = 292 Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 19/127 (14%) Query: 978 MQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLV 1037 M ++L L ASG E R+ + +DG + P+ AL L +L+ + EG + PL + Sbjct: 1 MPVYLRSLALAASGSQAELRV-VARDGLVQVLPMDPSDALARLRELMALWHEGQNGPLPL 59 Query: 1038 LPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQL 1097 SG A + QAYEG +V GEG+D + R + Sbjct: 60 PLRSGLAMAEGFP------------------AAAQQAYEGGHLVGGEGEDPSWARCYPDF 101 Query: 1098 TPETMEA 1104 + + Sbjct: 102 EQLSADG 108 >UniRef50_O66983 ATP-dependent DNA helicase REP n=3 Tax=Aquificaceae RepID=O66983_AQUAE Length = 669 Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 43/373 (11%), Positives = 104/373 (27%), Gaps = 79/373 (21%) Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 +DI V+V +I VF +PY + ++ I+LL L Sbjct: 321 YELKDIAVLVR-----VGYITDVFERTFFKAGIPYKVVGTIKFYERIEIKNLIALLRLIY 375 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + L F + + + Sbjct: 376 NPSDEVAFKRL--TEFFVKGFG-------------------------DKSFEVVKKNFKG 408 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 W L L +A ++ + + L + + +++ + Sbjct: 409 NWFKALKESLKKLPKNAAISAYEFLKAVVPLYKNPEKYHEGLEAFVEKIDYY-------- 460 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 ++L F + E + +++ ++ A + + + Sbjct: 461 ----------ELLKEKFK--KDYEERIENVKEFLSSLKDFYAKAYTLEDLLAEI------ 502 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 + V I T+ + + F VV L + +G+ P + + ++ + Sbjct: 503 ----TLTSEEEEEENAVKILTIHSAKGLEFPVVFLPRLEEGILPHHRSQESERELEEERR 558 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 F A+ A+ L++SY + R PS + ++ ++ Sbjct: 559 L------------FYVAITRAKDLLFMSYTKK-----ENRKPSRFLSDIPKHLLDLSAFK 601 Query: 763 GDEALNCDESEAR 775 + + +E+ Sbjct: 602 KKKKVAYEENLRP 614 >UniRef50_B2WB64 ATP-dependent DNA helicase pcrA n=2 Tax=Pleosporineae RepID=B2WB64_PYRTR Length = 851 Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 61/410 (14%), Positives = 122/410 (29%), Gaps = 59/410 (14%) Query: 390 HDRLLAMLEEDPTL-----TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 ++ + TL + D ++V SP + A +PY + Sbjct: 323 ARWIVEEIHRTKTLTAGLLSFNDYAILVRS----SPLTLQI-ERALGQAGIPYRMVAGTK 377 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV-----LAARFDITEEGLRYLRQWVNE 499 ++ + L + ++ V +++VP + + + E +R + W Sbjct: 378 FFDRAEIKIILDYLRVISQPDHNDAVARVINVPSRKVGDVTVKALLEEAEVRKVTLWKLV 437 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGL--TRMLLGYAMESAQGEWQSVLPYDESSGLI 557 + G + G + + +R L A + GLI Sbjct: 438 LDVAQGRRKPQCKVSAQANIGISQFVNVILTSREKLLPAKSDECDLF----------GLI 487 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 ++ +A ++ L Q E W + + + A+ E+ Sbjct: 488 MHVLNKIA--------FQSYLKQAHK-ENWQDRWAN-VEELINQATQMATAVANGEEISD 537 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQ-RLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 + E G + LL LA L V I T+ + + + VV Sbjct: 538 DALPEVEGLEQRSDTAADLLSKFLANVTLSSAADQDGSELDQVTISTIHAAKGLEWPVVF 597 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI-GRS 735 + + DG P A +D++R L + AQ LY+S +S Sbjct: 598 MPAVYDGSIPHSRAED----------------QDEERRLLYVGMTRAQGLLYLSCPVKQS 641 Query: 736 IQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 Q+ + S + + I + G + + + L Sbjct: 642 GQEQTTL--SRFISD--RKIQKLFNERGPDLAFKRSTIPDLARILRRNCP 687 >UniRef50_A6WGC7 ATP-dependent nuclease subunit B-like n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WGC7_KINRD Length = 1045 Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 86/679 (12%), Positives = 179/679 (26%), Gaps = 100/679 (14%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + V P+ EV + +LA L+E+P P I + ++ + +A Sbjct: 249 VDLVVAPDPEEEVRLAVRSVLAHLQENPA-RPDRIGIAFTSSRPFARLLAEQLSTAGLPH 307 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 ++P +R I LL L + DV A L T Sbjct: 308 HVP----GQRTLAQTVAGRTLIGLLELHRRGYPRADVSAFFASGPLLTADG-TYVPASTW 362 Query: 494 RQWVNESGIRWGID-DDNV-RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 + +G G+ E + ++ ++ + Sbjct: 363 ERVSRTAGATRGLSTWRQRLDRFEQQGPRHTGDEESIRQVAAARSLRLTLDGLAAAAEAA 422 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + A L R L R ++ W L + + A+ Sbjct: 423 LGAPTWAHAAEALR------VALRVCLGDRRSVDGWTLRAEADLQRAVELEQQAHDAVDT 476 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + A G G + +RD + L S L + + + Sbjct: 477 ALGALAQLDATGQGP------DAAAVRDAVTDALGTAAPSATVLGRGILVGPVREFAGAD 530 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR-----SRRDDDRYLFLEALISAQQK 726 ++ +LG+++ P + + + SRR D++ A + + Sbjct: 531 LDLLLVLGLSEDAAPARQREHPVLRDADRELLSPDLATLASRRADEQRA-WRAALRTAPQ 589 Query: 727 LYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH------- 779 + +S + + +F S E + + E + + ++++ Sbjct: 590 IVLSCARANSRTQRRQFASPWFLE-QASLRAGRPVGAGEVDSPGSALPGLRSYDSFVDAL 648 Query: 780 -----LTCLHTRMP--------FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 T +H D Q A + + LP Sbjct: 649 DRGGEFTSVHELDAARTVLAGAVDELAAADPRLQRGLVAARARARGEFGPWTGGTEELPE 708 Query: 827 TLPETV----PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 L E V +L+R+ P R F+ L+V E + R + Sbjct: 709 GLRERVDRGHSATSLERWATCPARHLFRDVLRV-----GRLEEAAEHDSVSPADRGSLLH 763 Query: 883 QLLNALVEQ-------------------------DDAERLFRRFRAAGDLPYGA-FGEIF 916 +L + D + R G L + Sbjct: 764 DVLEEFLRPHLGTPEQPGRSPDAAWTPEEVQAALDLLDTHVARLERRGGLGRHPALWPVQ 823 Query: 917 WETQCQEMQQL--ADRVIACRQPGQSMEIDLACNG-------------VQITGWLPQVQ- 960 +++ L AD + + ++ A ++++G + ++ Sbjct: 824 LRELRRQVADLLAADSARRAAERSWPIAVEAAFGDEDALVLDLPTQGALRLSGRIDRIDA 883 Query: 961 --PDGLLRWRPSLLSVAQG 977 GL+ + Sbjct: 884 TAAGGLVVQDYKSGKSSSY 902 >UniRef50_Q331U3 Putative ATP-dependent DNA helicase n=1 Tax=Clostridium phage c-st RepID=Q331U3_CBCP Length = 592 Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 52/399 (13%), Positives = 128/399 (32%), Gaps = 91/399 (22%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 DI+ N V S++K + + I + Q E + +++ +L+E Sbjct: 263 QDIVNKANNFVRRYYGNYRYYSNSK-AYNNSKAHIDINTYMHQQDESNEVVNKIQKLLQE 321 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 P +I V+ ++S+S ++ R +PY IS+ + +E +S L Sbjct: 322 GE--KPNEIAVLYR-LNSHSHHVE----GELRRRKIPYYISNNSSFFKRKEIEGVMSYLR 374 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 L D+ + + + R + + Sbjct: 375 LIDNPYDNSAFENIFK-----------------FRNYPIQF------------------- 398 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 + L + + +A + +++ + + + + + +L L Sbjct: 399 ----FSNKLLQDIKSFAGRNNLSLYEAFTLFKYKENWQEKNMKIFENNIEKL-----RLQ 449 Query: 580 QERPLE--------EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 +++ ++ + + + + + E + IE Sbjct: 450 KDKNIDICKLIDNVKLAFNIEEYIECKYSNREDQEDRLNSIETL-------------KSF 496 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 V + L+ + + ++ V + T+ + + FK V ++G+ DG +P + Sbjct: 497 VKGNNLQGFINYAYNSSNKKKQDNKDCVKLMTIHSSKGLEFKHVFIIGIEDGKFPHK--- 553 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 +S D+ LF + ++ LY+S Sbjct: 554 --------------KSEIIDEARLFYVGVTRPKENLYLS 578 >UniRef50_A5EW07 DNA helicase UvrD n=2 Tax=Dichelobacter nodosus RepID=A5EW07_DICNV Length = 664 Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 56/413 (13%), Positives = 119/413 (28%), Gaps = 69/413 (16%) Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 L+ + L+ D + + + E E + + Sbjct: 283 LQAANTLIAHNPHLVEKRLWSQLERGDG-VCVFAARNDEAEAERIASAIYQQKLRTQAA- 340 Query: 405 PRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 ++ V+ Y QA A D +PY IS + H + ++ L L ++ Sbjct: 341 WQNFAVL------YRSNFQARAIEQALRDVSIPYQISGGTSFYEHSEIRDLLAYLRLINN 394 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 L + +VP + +I + L L ++ Sbjct: 395 PEDDAAFLRICNVP----KREIGTKTLTVLGEY--------------------------- 423 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + L YA ++ L A + + ++ P Sbjct: 424 --AAKRQCCLFYAATE----------LGLATLLSARAAMSVQQFCQWIEEKQKEAETALP 471 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV-PLSLLRDELA 642 V ++ ++ E A + + +IA + + + L+ L + Sbjct: 472 SALLQTVIDEVAYREYIEANEAPAKAEKRWARVEELIAWLVRLEEEERYQSLAGLMRHVL 531 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 L Q V + TL + + F V + G+ + + P + ++ Sbjct: 532 --LLDILEHQDKQKDGVQLMTLHAAKGLEFPYVYIAGVEEDLLPHHHCGESEEAIA---- 585 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELID 753 ++R L + A+ +L +SY + S +QEL + Sbjct: 586 --------EERRLLYVGMTRAKFQLTLSYAKQRRHGKNWEASTASRFLQELPE 630 >UniRef50_A8STY9 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8STY9_9FIRM Length = 1303 Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 51/388 (13%), Positives = 123/388 (31%), Gaps = 67/388 (17%) Query: 385 EVEVLHDRLLAMLEEDPT------------LTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 E + + +++ +++ D + DI++++ + + VF D Sbjct: 611 EAKYIANKIHEIVDGDDPMYIHDGDGTVRKVEYSDIVILLRSVSGSAT----VFDQVFED 666 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +P I + +S+LS+ D+ +V D+ A+L P++ + EE L Sbjct: 667 EGIPIYIQSESGYFGAVEVSCLVSMLSVIDNSYVDGDLAAVLRSPMV----GMDEEELAR 722 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 + V E R+ ID + + + + Sbjct: 723 I---VGEYRTRYEIDGRDYNVRLYDKLIDYLENHDDE-------GQGECAGLDDMAKSSA 772 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA----FFLPDAETEAA 608 + G +L+G + + + L L + + + R +L+ +F+ Sbjct: 773 AIGDEDKLIGKVRAFVGML----DYLKENKNFMSLSDIIRYVLDQTGFYWFVGARPMGRR 828 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN-ICTLMPM 667 + G + + + LD V + T+ Sbjct: 829 RQANIDMLIKKADDFEKNSKGVFNFIRYVNELKTNSLDFAEADIVSDNDDVVRVMTMHKS 888 Query: 668 RSIPFKVVCLLGM---------------NDGVY--------PRQLAPLGF--DLMSQKPK 702 + + F V+ + G+ + Y ++ F ++M+ + + Sbjct: 889 KGLEFPVLFVAGLGKSFNMKDVQKKVLVHQQYYLTASAIDADARVKRDTFLRNVMASEMR 948 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYIS 730 ++ + AL A++KLY++ Sbjct: 949 V---ENYAEELRVLYVALTRAKEKLYMT 973 >UniRef50_Q2IGD2 Putative uncharacterized protein n=3 Tax=Anaeromyxobacter RepID=Q2IGD2_ANADE Length = 1151 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 147/1012 (14%), Positives = 262/1012 (25%), Gaps = 158/1012 (15%) Query: 10 LDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQ--KFGIAANIDFPLP-A 66 +D L V P +LV S A L+ L++ + A F P Sbjct: 49 IDTLGD-WADAVAALPAPGPLPARTVLVPSERHAHALRRELARTGRDAALAGTRFLGPLT 107 Query: 67 SFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQ 126 + I + +P P E A +L+ L + L L H+ D + + Sbjct: 108 AAIEVLQAAGVPFTPGEGALRPA----RLLALFHEDL------PLEHFDLDLLRTTRGWD 157 Query: 127 --LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRW 184 + DL A + A A LW + + Sbjct: 158 EAFAGAIGDL-----------EAAGLAPRDLPAEPAAARDLARLWSRVEDGAGTSFSS-- 204 Query: 185 HRANLYQRFIETLESATTCPPGLPSRVFICGISALP-------PVYLQALQALGKHIEIH 237 A +++ L P L V + L+A+ + Sbjct: 205 --ARIFREAAALLARDAGAWP--------FHGPTLALASGHADAVEARFLRAIPG---VR 251 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 L D + L R R + L D ++ V Sbjct: 252 LAVQT----------DRPAGERHLERVERLFGAEARSALAARGSTGSPRAEEDRDRAVRT 301 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 P S G A D L + +D L + A Sbjct: 302 PARGSTGSP---------RAGGPGSSPAGRVTERDLLATYLLADAAVLADPARPRSGGP- 351 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEV----LHDRLLAMLEEDPTLTP-RDIIVMV 412 D ++ + E+E + ++L P +I V+V Sbjct: 352 -------------DGTVDLEEHAGVEAELEATALWVARQVL------EARRPLEEIAVLV 392 Query: 413 ADIDSYSPFIQAVFGSAPADRY-LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 D D + + P D LP ++ S ++++ S +E + Sbjct: 393 PDQDPLAGLVADRLARLPFDGGPLPVFVAGGLPAISTAAGARILAVVRALRSHLSAETLA 452 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE--LPATGQHTWRFGLT 529 +L P L + + E GI N L +G+ R G Sbjct: 453 PVL--PALRLEGVVDGDRTHLTHGEAMELAFGLGIVGGNPAHPAGALAWSGRAAARAGEL 510 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 L + + + G + + L L R + + PL Sbjct: 511 EAALAQVHADDDSAERERWRLERTLGSLRAIRPAL----DALVGVARAVVEGAPLAAIGD 566 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 V L L E A + + A LG L ++ D+L L + Sbjct: 567 VLGGFLTRCLLAPGEGAALPARLVEALAPACAGSLGKALSGDDALQVVEDQLL-GLRVAQ 625 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF--DLMSQKPKRGDRS 707 A V + T+ + F V ++G+ +GV P Q + ++ +RG Sbjct: 626 GRFGEPA--VYVGTVAGAAGVSFGAVRIVGLCEGVLPSQPREDPVVPGALREQLERGAPD 683 Query: 708 R---RDDDRYLFLEALIS-----AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 R R +DR + A+ + +S + ++ + Sbjct: 684 RVLRRAEDRVAAQAHALVAAVRGARDAVALSAPRVDLARTEREPGAIFIDAAAALARPHA 743 Query: 760 YLPGDEALNCD------ESEARVKAHLTCLHTRMPFD-PQNYQPGERQSYA--REW---- 806 D ++ + P R + A EW Sbjct: 744 ATGAPAEAVPDGAALRRDAFRPAASAAARFRDAHPISDASWLDRVARTAPALPPEWTGTP 803 Query: 807 ------LPAASQAGKAHSE---------FVQPLPFTLPE-TVPLETLQRFWAHPVRAFFQ 850 L A P+P PE + L + P + Sbjct: 804 VVDLARLAALRAPSGPLGPSDGIFDRGGPFPPVPGIAPERPISASALGQLLQCPRLFLMR 863 Query: 851 MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN--ALVEQDDAERLFRRFRAAGDLP 908 L + + + L+ LS + +++ R R +L Sbjct: 864 RILGWDEPASAPSLRE-----LDPLSFGSLLHRVVELFYREHGAAFSRREGRLARWLELA 918 Query: 909 YGAFGEIFWETQCQEMQ------QLADRVIACRQPGQSMEIDLACNGVQITG 954 G + ++ E +L +R + + D + G Sbjct: 919 RG-VADRAFDGLLSEYPLVGEGVRLKERERLHDALREFLAYDWKGGPRRFVG 969 >UniRef50_UPI0001C31915 UvrD/REP helicase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31915 Length = 1052 Score = 90.9 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 72/478 (15%), Positives = 142/478 (29%), Gaps = 65/478 (13%) Query: 308 RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 RD+ L D Q +F A + KR Sbjct: 282 RDFQAELPDATVVQLEHSFRCPQ---------------RVLDAANAVVAPLEDRIEKRLD 326 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 PL + F + + + + + + ++ + P I V+V I AV Sbjct: 327 GPLGGEVAFWRSANERAQAQSVAADVERLIGR-EGVPPERIAVLVRSIAR-EGQAVAV-- 382 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A +R + + + A + ++ L L + V+ L P + ++ Sbjct: 383 -ALEERAVGHRLIGEAAFFQRAEVRDLLAWLRLLIDPADAPAVVRALARPPI----ELRS 437 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L Q R +D L + RM LG Sbjct: 438 VDLARCTQIAR----RRKLDMVGALGAALESPQIPPEARDRIRMFLGLYRS--------- 484 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + +L + L+ +L + R+ L + E + R + A Sbjct: 485 -AVGAIDTMRPDLF--VHRLIERLGLRRQQLFTAQ--AEVVERLRGL------------A 527 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + + + ++ ++ + L +E V + ++ Sbjct: 528 RFGELATAFTQRQPQATPREFARSIAAAA-----EAGLREEEEPPPATTRGVQVMSMHAA 582 Query: 668 RSIPFKVVCLLGMNDGVYP----RQLAPLGFDLMSQKPKRGDRS-RRDDDRYLFLEALIS 722 + + F V +LG++ P R L P+ LM + D + R L A+ Sbjct: 583 QGLEFDHVFVLGLHAAGLPGAHTRTLEPIAPALMKETLPEDDHEAHVAEMRRLLHVAMTR 642 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 ++Q+L + + S + + + PS +E +G +E ES L Sbjct: 643 SRQRLVLVHPQASDR-GAAQPPSPFAEEARAAVGGVWEERAEELFGPAESLHSTYRIL 699 >UniRef50_B2A3D2 UvrD/REP helicase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A3D2_NATTJ Length = 754 Score = 90.9 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 55/380 (14%), Positives = 121/380 (31%), Gaps = 78/380 (20%) Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 F +S + E E + +LA+ + + +D+ V+ + +IQA R Sbjct: 434 QFIKYYSQEEEAEAIVSEILAL--REQGFSYKDMAVLYR-AGFHGNYIQA----ELLRRK 486 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +PY + ++ +S L L + + L + Sbjct: 487 IPYVVYGGIKFMERKHVKDLVSYLRLTVNPIDAVSWNRFLKMIP---------------- 530 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 G+ R+ +E + L ++ Sbjct: 531 --------------------------------GIGRVRASQIVEEITEQ-DGRLNFNNFK 557 Query: 555 GLIAELVGHLASLLMQLNIW-RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 G L SL L ++G++ + + +L + +E + + ++ Sbjct: 558 GTSYY--KSLLSLQEVLLEAGKKGISPSNSVARIIEYYYPILEKQEVDASERKNDLEVLY 615 Query: 614 QQWQAIIA-EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 Q E A P + + E L++ + I T+ + + + Sbjct: 616 HLSQNYSELEQFLADLSLEPPANKFQQETTPALNEAE-----DDDSLVISTIHSAKGLEW 670 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 V + + DG++P + D +++R LF A+ A++KLY+S Sbjct: 671 NTVFIPHLLDGLFPSSKS------------LRDPFILEEERRLFYVAITRAKEKLYLSMP 718 Query: 733 GRSIQ-DNSERFPSVLVQEL 751 + + + PS +++L Sbjct: 719 HQVVSYNGYFIQPSRFLKDL 738 >UniRef50_A5EWK9 DNA helicase II n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EWK9_DICNV Length = 712 Score = 90.9 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 47/406 (11%), Positives = 113/406 (27%), Gaps = 64/406 (15%) Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 +I + + E L + + A + ++ S + ++ A Sbjct: 316 EAIALYAAVNEYDEARYLVENI-AQFHQHGGA-YDQCAILYR-----SNALSRIYEEALI 368 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 + +PY I ++ ++ L L + +++ P I + + Sbjct: 369 QKNIPYRIYGGLRFFERAEIKDALAYLRLLHYPDDDAALERIINQPP----RGIGAKTME 424 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 +R + L WR LL Sbjct: 425 DVRLL------------AQRVQCSL-------WRVITDDALLE----------------- 448 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 A L + + L + L + D + + Sbjct: 449 --QKCSARAQNALRQFRALIIKMTAFAERSDSLRDILKMVVDESGLYAALTNNNQEETEN 506 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + +IA G + + D LA + + A V + TL + + Sbjct: 507 RRENLHELIAAGDYQSDQNDADHDKIADFLAMA-SLDAGDKETNAHGVQLMTLHSAKGLE 565 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F V ++ + +G++P + + ++ +++R L + A+++L +S+ Sbjct: 566 FNRVYMVALEEGLFPNARS------------LENSAQLEEERRLAYVGITRAREQLTMSF 613 Query: 732 IGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 R + PS + E+ + ++ + Sbjct: 614 AERRRYYGQDNYARPSRFLNEIPPELLNMVRPVLFNRTQPNDIQED 659 >UniRef50_B4S6V4 UvrD/REP helicase n=2 Tax=Bacteroidetes/Chlorobi group RepID=B4S6V4_PROA2 Length = 984 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 52/297 (17%), Positives = 94/297 (31%), Gaps = 39/297 (13%) Query: 564 LASLLMQLNIWRRGLAQERPLEEW----LPVCRDMLNAFFLPDAETEAAMTLIEQQ---- 615 L L L W + + + ++L AF + E + ++ Sbjct: 458 LNKFLEILADWNNQIHRPIGGARRKVYPQLLVHELLEAFRISTTEFQNHEQVMRDLGVFS 517 Query: 616 -----WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 + + Q ++ L+ L + D ++ V I T+ M+ + Sbjct: 518 GIILDVEKVFVSIDTGQRYQSM-LNFLENVAESGYDTTQVELMSRPDAVTISTVHKMKGL 576 Query: 671 PFKVVCLLGMNDGVYPRQLAP----LGFDLMSQKPKRGD-RSRRDDDRYLFLEALISAQQ 725 F VV ++ + +P + + L +L+ RG +S + LF AL A++ Sbjct: 577 EFPVVFIVDVVQQRFPGKRSSYNGWLPLNLIQNPLSRGLYQSNIFGEARLFYTALTRAER 636 Query: 726 KLYISYIGRSIQDN--SERFPSVL---------------VQELIDYIGQSHYLPGDEALN 768 LY++ G SIQ + PS L D I + P + + Sbjct: 637 FLYVT--GSSIQPGLQRPKNPSPFKLIIQGLNDPEVITDTTHLPDNIERIEQRPRIDEES 694 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 S +K +L C F L + +AH F P Sbjct: 695 MPTSFTEIKDYLECPMK-YKFRKIYGYSPAVPELFGYGLTTHTAINRAHQLFANAAP 750 >UniRef50_Q2GE51 Helicase, UvrD/Rep family n=2 Tax=Neorickettsia RepID=Q2GE51_NEOSM Length = 630 Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 115/370 (31%), Gaps = 78/370 (21%) Query: 387 EVLHDRLLAMLEEDPTL-TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 E ++ M++E L D ++V + F F A +PY + Sbjct: 335 EQEARAIIRMIKERKLLCRYSDTAILVR-----AGFQTRAFEEAAIHENVPYRVVGGLKF 389 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 + I+ L L + + +++ P + + + L + + E G Sbjct: 390 YERKEIRDIIAYLRLVVNPNDNLAFERIINTP----KRGLGQASLNKIYNYSLEEGC--- 442 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 +++V +E+ L + L Sbjct: 443 ------------------------------------SMFEAVRKLEENEKLKS---TALL 463 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 + + Q+ W+ + L + L + E + +++ ++ I Sbjct: 464 TFVKQVRKWQEE-SLNHSLHDLLKKITLESGYISALKEQDETRIENVDELFRVIQEFDDA 522 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 + V L E +Q + VN+ TL + + F+ V L G DG + Sbjct: 523 TDFLQHVSLLT-----------ESDAQINNSDAVNMMTLHASKGLEFEQVFLPGWEDGTF 571 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF-- 743 P + + +++R L + A++ L I+ R + NS + Sbjct: 572 PHVRS------------LCSTEQIEEERRLAYVGITRAKRFLTITSAHRRLIRNSWQNTV 619 Query: 744 PSVLVQELID 753 S + EL + Sbjct: 620 KSRFMLELAE 629 >UniRef50_C2ME74 ATP-dependent DNA helicase PcrA n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2ME74_9PORP Length = 778 Score = 90.5 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 65/453 (14%), Positives = 133/453 (29%), Gaps = 80/453 (17%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPAD 432 + + S E L D + ++ + D ++ Y Q+ F Sbjct: 322 LQLYHYTSSDEEATRLIDIITQR-HDEEQIPLSDQTIL------YRTNAQSRKFEEVLLS 374 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY I A + ++ I+ L L + + + P R I ++ + Sbjct: 375 EGIPYVIYGGMAFYARAEIKDAIAYLQLIINPHNELALRRAIAYP----RKGIGDKTIEK 430 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 + + + + +L L L A++SA Sbjct: 431 VALYAQQ----------HSPQLSLYD-------------ALCAAIDSADPV--------- 458 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC---RDMLNAFFLPDAETEAAM 609 GL + +AS + ++ LEEW+ ++ D A Sbjct: 459 --GLSRGVRNKIASFVNLIDSLASAYQHYAKLEEWIAHILRESGIVAELTREDTVESQAK 516 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPL---SLLRDELAQRLDQE-------------RISQR 653 +++ + +E D + L L EL Q+ + S Sbjct: 517 LDNLKEFISSASEFEARYRQDPLNLFAEEPLGTELLSAFAQQIPLLTNQDQDNVEQQSGV 576 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 L + + T+ + + F V + G+ + + P + +++ +++R Sbjct: 577 ALQDRLQLMTIHVAKGLEFPYVYIAGVEENLLPSSRSLDTAEMI------------EEER 624 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 L + AQ+ +SY ++ PS + EL H + Sbjct: 625 RLLYVGITRAQKLCTLSYTSIRTRNGKTELMIPSRFIAELPRAHYTLHEEAAPIGTSV-R 683 Query: 772 SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 S A T P +Q A+ Sbjct: 684 SYANSYQPTTNSQRPTATSPSASSATAQQMLAK 716 >UniRef50_B3QYG2 UvrD/REP helicase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QYG2_CHLT3 Length = 700 Score = 90.5 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 68/452 (15%), Positives = 145/452 (32%), Gaps = 91/452 (20%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 +IL L N + + +++P L + + + + R+L + Sbjct: 316 PEILSLTNFVINRAKEKFTKTLFSRKPEGELPA---IVSAPDERFQTRFIAQRILEL--R 370 Query: 400 DPTLTPRDIIVMVADI-DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 + + R+I V++ + DSY+ ++ R +P+ + ++ F++ L Sbjct: 371 EEGVPLREIAVLMRNGRDSYALELE------LRKRNIPFVKFGGQKVVEAAHIKDFLAYL 424 Query: 459 SLPDSR---FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 L + VL LL+ + + + + +WV +SG Sbjct: 425 KLIYNPRDVISWNRVLQLLE--------GVGPKTAKQVIEWVKDSG-------------- 462 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 + E V + S A + +L LL L+ + Sbjct: 463 ------------------------SPYEIGGV----KMSAKYAASLKNLGDLLGSLSSGK 494 Query: 576 RGLAQERPLEEWLPVCRDML-NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 + L + + ++ ++ + E + P+ Sbjct: 495 KSLGE--TAAAVMNYYLPLMHEKYYEDFPKREKDLENFLNIIANYQNLETLLAELALDPI 552 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 L E + P+ + T+ + + ++ V L+ M DGV P + A Sbjct: 553 EL--------TAIETEPAKPDEQPMTLSTIHSAKGLEWRTVFLINMLDGVLPSKYAVD-- 602 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE---RFPSVLVQEL 751 D + D++ L A+ A+ LY+ Y Q E PS +Q+L Sbjct: 603 ----------DAASLDEELRLLYVAMTRAKSLLYVCYPIVCTQRGFEDYMSNPSRFLQKL 652 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 D + + L ++ + + + K L Sbjct: 653 PDALYERILLVQEKRKSPPQLSGKAKPQLQKK 684 >UniRef50_Q2SPC8 Superfamily I DNA and RNA helicase n=4 Tax=Gammaproteobacteria RepID=Q2SPC8_HAHCH Length = 776 Score = 90.5 bits (223), Expect = 4e-16, Method: Composition-based stats. Identities = 67/433 (15%), Positives = 129/433 (29%), Gaps = 81/433 (18%) Query: 392 RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVL 451 +L +L + P DI ++ P A +PY I + ++ + Sbjct: 365 QLGRLL--NGGGEPEDIAILFRVWSQAVPV-----ELALLAHRIPYRIDGDKGALANREV 417 Query: 452 EAFISLLSLPDSRF-------VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 +L + R +E + LL P + + ++ LR L + + W Sbjct: 418 MHIQYVLEMASGRLGMLEENKRAEVLAGLLRFPHV----GLKDDTLRELAHILAQHDAHW 473 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 G D + E + R L A Q+ + G A++V Sbjct: 474 G---DQLLEWIPD-----SLHALQKRKLKRTA--------QAWSLLPKMKGSAADIV--- 514 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 + + LEE D E + Sbjct: 515 -------RFYIDDTELFKTLEELA----------LTHDTADERI-----NNVLGVEHYLA 552 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 L + +RL + Q G V + T+ + + + VV L+G+N+ Sbjct: 553 TLNLPSLETLQHFDEL--RRLASAQKQQ----GGVTLSTMHRTKGLEWPVVMLIGLNEQY 606 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD--NSER 742 P + + +R L A+ A++ LY+ + + + + Sbjct: 607 LPYSMRGGEDIV----------DHLQAERRLLYVAMTRAKEALYLFTPTLNDKTALSKDD 656 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 PS V+E + + D+ D +++ AH P + Y Sbjct: 657 KPSRFVKEACMDVSMAVGEFLDQRKQTDANDS---AHYESGQRLTPIATRYLDWHNVN-Y 712 Query: 803 AREWLPAASQAGK 815 + AAS+ + Sbjct: 713 EQPAQAAASEPEQ 725 >UniRef50_D2R5I6 UvrD/REP helicase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5I6_9PLAN Length = 800 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 47/398 (11%), Positives = 118/398 (29%), Gaps = 65/398 (16%) Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 + + +P + + + + E E + + + + PRD + Sbjct: 317 RKEKDLFTDNPQGNRVRLATFPTQRDEAETIAEEIAHEVRTGK-RRPRDFAIFYR----- 370 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 + + A ++ +PY I + ++ ++ L L ++ +L +++ P Sbjct: 371 TNALSRQIEHALREQVIPYQIVNGLEFYQRKEIKDVLAYLQLVNNPRSDAALLRIINTP- 429 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 I + + +++ + I +D + + G A + Sbjct: 430 ---TRGIGKSTIAKIQEVARDRAIPL-LDAARMAGT-----------------ISGLAKK 468 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 SA + V D V L ++ +R L Sbjct: 469 SAVAVAKFVAMLDLIGTKATAPVEELVGYVLTETGYREVLENS----------------- 511 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 E + +E+ A L G L + L + + + Sbjct: 512 --EAEEDHERLANLEELLTAASEFDLRNPGGA--GLEQFLE--DSSLVADTDAFESDSDK 565 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 V + TL + + F V ++ +G+ P + + + + ++ + Sbjct: 566 VTMMTLHAAKGLEFPAVYIVACEEGLLPHERSRRDEEKLEEERRLL------------FV 613 Query: 719 ALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDY 754 + A Q L +++ + + S + EL + Sbjct: 614 GITRAMQDLTLTWAQYRMFRGQQAPAVASSFLMELPRH 651 >UniRef50_C9RKG0 UvrD/REP helicase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKG0_FIBSS Length = 803 Score = 90.1 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 63/463 (13%), Positives = 139/463 (30%), Gaps = 83/463 (17%) Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK-----RPLDP 369 +D+ E D F T LL Q++ ++ V + + RP+ Sbjct: 297 ADINRILEFDQFHKGTKTILL---QNN--YRSTPSILKVPDAVIKNNKYRIEKVLRPVRA 351 Query: 370 LDSSITFHVCHSPQRE----VEVLHDRLLAMLEED-PTLTPRDIIVMVADIDSYSPFIQA 424 + F+ + + E VE + + + ++ + +DI V+ Y Q+ Sbjct: 352 GGKTPVFYHAKNTREEAKWIVERIQNAVQNSVKNGAGGVHYKDIAVL------YRMHSQS 405 Query: 425 V-FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 A +PY + ++ I L + D L+ + R Sbjct: 406 RSVEEALMSESIPYKVYSGVGFYQRKEIKDIICYLRMLV----YADDLSFIRTVNTPKR- 460 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 + + L+ + D + A + + G + + Sbjct: 461 QFGPKKMAILQAF-----------ADTRKVGLYEALLEIVYEAGR--------LNDVAPD 501 Query: 544 WQSVLPYDESSGLIAEL---------VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 + ++ ++ + + +R R E + R+ Sbjct: 502 VTTQAELSSVGNDHRKIDFDCKEFLSRSNVVEYVKLIEKYRSRYKDMRVSELLSKMLRET 561 Query: 595 -LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 D + + + + + Q I+ Y + L + + + SQ Sbjct: 562 KYEEMLRLDGDEDR-LDNLAELKQGILEF--ENYYEEDASLDEYLQNIVLFTNADEDSQE 618 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 V + T+ + + F V + G+N+G +P + L +++R Sbjct: 619 --KDRVQLMTIHNAKGLEFPYVFVCGLNEGFFPVKRVQNKMQL-------------EEER 663 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSE-----RFPSVLVQEL 751 L A A+ L +S +D R+PS + E+ Sbjct: 664 RLAYVAFTRAENVLCLS----DAEDGVAGESGSRYPSRFLLEM 702 >UniRef50_B0RZV9 ATP-dependent DNA helicase n=2 Tax=Finegoldia magna RepID=B0RZV9_FINM2 Length = 725 Score = 90.1 bits (222), Expect = 5e-16, Method: Composition-based stats. Identities = 40/380 (10%), Positives = 114/380 (30%), Gaps = 77/380 (20%) Query: 390 HDRLLAMLEEDPTLT---PRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPYAISDRRAR 445 D+++ +E++ ++ ++ Y Q+ +F +P + Sbjct: 329 ADQVVQWIEQER-YRENPYEEMAIL------YRTNAQSRLFEERLNRLGIPNRVVGGLKF 381 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 ++ +S L + ++ + + +++ P + I + + L Q I Sbjct: 382 YDRKEIKDCVSYLRIVENLNDNMALNRIINEP----KRGIGKTTMDKLLQCSQNRSIS-- 435 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 ++ Y +++ ++ + L Sbjct: 436 --------------------------MMQYIIDTDLPDFSN------------ATAKKLQ 457 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 + + + L E++ + ++ + + + + Sbjct: 458 EFYYLIKSFPKDQMNVAELMEYILDKTGYRANLEKSTNRDDKTRLENIDEYVSSLYQFVQ 517 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 + L L LD+ + V++ T+ + + F VV G+ +G Sbjct: 518 DNPDKNLREYLETSSLMTDLDKTDDN----TKGVSMMTIHAAKGLEFDVVFFTGLEEGTI 573 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERF 743 P ++ +++R L A+ A++KLYI+ + + N + Sbjct: 574 PSRVDED----------------VEEERRLCYVAITRARKKLYITSVQSRRRFNEFQTKA 617 Query: 744 PSVLVQELIDYIGQSHYLPG 763 S ++E+ + Sbjct: 618 ESRFIEEMENKYKDESPNKE 637 >UniRef50_C5TB61 UvrD/REP helicase n=3 Tax=cellular organisms RepID=C5TB61_ACIDE Length = 778 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 52/397 (13%), Positives = 104/397 (26%), Gaps = 70/397 (17%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEE-DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 + + + E E R+ ++ +P + ++ + F A Sbjct: 397 VRVVDADTEEHEAERAVARIQSLRAASNPPPDWKSFAILYR-----ANHQAKPFEKALRR 451 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY +S + ++ + L + L + P Sbjct: 452 ANIPYKVSGGTSFFDRAEIKDLCAWFRLWINNDDDPAFLRAIGNP--------------- 496 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 + GI + L AT FG + +LP Sbjct: 497 ----------KRGIGHTTLAALGAFATQHKQSMFG--------------ALFNGMLPAAV 532 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF-----FLPDAETEA 607 + L +N E+ D L ++E Sbjct: 533 PK----RALDGLHEFGRYINDLEHRARHTHGAEDARAFLADWLKEIGYEQHLYDGEDSEK 588 Query: 608 AMTLIEQQWQAIIAEGLGAQYGD--AVPLSLLRDELAQRLDQERISQRFLA--------G 657 G +++ E L+ + Sbjct: 589 VAAARWSNVMEFCDWMAQRAGGQIDDTAGAVVARETKSLLEVSQTIALLSTISEREKEQD 648 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V + TL + + + V L+G+ +G+ P +L QK R ++R L Sbjct: 649 MVTLSTLHASKGLEWPHVVLVGVTEGMLPFKLDDDEG--RQQKVTDDTLQRLQEERRLMY 706 Query: 718 EALISAQQKLYISYIGRSIQDNSER---FPSVLVQEL 751 + AQ+ L +S+ + + E PS + E+ Sbjct: 707 VGITRAQRTLAVSWTKKR-KKGREMVAAQPSRFIAEM 742 >UniRef50_A3YTS6 ATP-depentend DNA helicase n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YTS6_9SYNE Length = 602 Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 69/470 (14%), Positives = 131/470 (27%), Gaps = 98/470 (20%) Query: 311 IYLLSDLESSQELDAFVDVTPDNL-----------LHNIQSD----ILELENRAVAGVNI 355 LL L + + FV D L L +Q+ I++L + Sbjct: 198 FRLLCSLVPEERPNLFVVADDDQLIYQWNGANPKRLQELQNRFSVEIVQLPENYRCPPAV 257 Query: 356 EEFSRSD--------------NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 E + + + D+ + ++EVE + D L + Sbjct: 258 IELANNLIIHNLDRSAGKERLRAHKVSTADTHLRVFYFGDFRQEVEWVVDELKKTPPDSR 317 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 T +V+ + AV + P IS R+++ + + L L Sbjct: 318 NST----VVLGRS----KKLLDAVITECKQQGF-PAYISIRKSQFISAPVTWLHAALRLA 368 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 ++R E + + A F + + + V S + G Sbjct: 369 NARQDREQLRRVCK-----AFFSLEGNNI-RVEDVVATSSFQGG---------------- 406 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 R L A++ + + + E + H + W Sbjct: 407 -----DYLRGWLEAALDQQTVSVATRGFLEHMKNTLLERLNHWL-FIDSAFRWLDA---- 456 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + + + W + E + D V L L Sbjct: 457 -------------IQNQPAATDNAFDEYQVEKDVWFLLQQEVIQQYGKDEVSL----HSL 499 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 Q D V T+ + + FK V LLG+ + P + + Sbjct: 500 LQEFDLRSKEAPPPKDAVRCMTIHSSKGLEFKRVYLLGLVEDQLPSW---------AARK 550 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 K D ++R A+ A+++L +SY + PS + E+ Sbjct: 551 KGDDSFEMSEERRNCFVAITRAEEELILSYS--DRYFGYPKTPSRFLTEM 598 >UniRef50_Q123W9 UvrD/REP helicase n=16 Tax=cellular organisms RepID=Q123W9_POLSJ Length = 716 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 60/409 (14%), Positives = 109/409 (26%), Gaps = 91/409 (22%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLT--------PRDIIVMVADIDSYSPFIQAV 425 + C S + E E + R+ L L +D V+ P Sbjct: 329 VRVVDCDSEEHEAERVVARI-QSLRAGGELQAVGSQYKEWKDFCVLYRANHQAKPL---- 383 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 A +PY +S ++ ++ S + L + + + + P + I Sbjct: 384 -EKAFRKAQIPYKVSGGQSFFDRAEIKDLCSWMVLLVNNDNNPAFMRSVTTP----KRGI 438 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 L L G D + A ++ L Sbjct: 439 GHTTLGTL-----------GTFADQYKLSLFEALFSNSLSSVL----------------- 470 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF-----FL 600 A+ VG L LN + E+ D L Sbjct: 471 -----------PAKAVGSLQEFGRYLNELEYRARRTVGAEDARTFLNDWLKEIDYEKHLY 519 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLG-------------AQYGDAVPLSLLRDE-LAQRLD 646 ++E + L +++ L + Sbjct: 520 DGEDSEKVAAARWSNVMDFCDWMALRCGGQIDDTSGAVVESEKKTMLEVVQTIALLSTIS 579 Query: 647 QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR 706 + Q V + TL + + + V L G N+G+ P F L D Sbjct: 580 EREGDQ----NVVTLSTLHASKGLEWPHVMLAGCNEGLLP-------FKLEEDDGSNTDN 628 Query: 707 --SRRDDDRYLFLEALISAQQKLYISYIGRS--IQDNSERFPSVLVQEL 751 R ++R L + AQ+ L ++++ R +D PS + E+ Sbjct: 629 IALRLQEERRLMYVGITRAQRTLAVNWLRRRKKNRDTIAGIPSRFIAEM 677 >UniRef50_C1V6P7 ATP-dependent exonuclease V beta subunit, helicase and exonuclease domain-containing n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1V6P7_9EURY Length = 1152 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 94/703 (13%), Positives = 184/703 (26%), Gaps = 127/703 (18%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLD-SSITFHVCHSP-----QREVEVLHDRLLA 395 IL+L N A+ ++ E ++ + D +I ++ + LL+ Sbjct: 437 ILDLANEAIQKLDHRERHKTLKRVDEPEYDGDTIATVELSDEDDADGASQLRTVVQNLLS 496 Query: 396 MLEE--DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV--L 451 E D P DI ++V D +P I+ D +PY ++ A +S V + Sbjct: 497 GAAESFDEAYDPGDIALLVRKNDHATPVIEE-----FEDAGIPYQVAGDLATESVGVGTV 551 Query: 452 EAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 A++ L+ P+ VL R+ + + L Sbjct: 552 TAYLKALARPEDEVSWNRVL--------LMRYRLCDTDL--------------------- 582 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 R L ++ L E +AE H+ LL Sbjct: 583 ------------------RKLNAGDDPLVDTLRETPLDEFEEPDRVAEARKHVTELLA-- 622 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 + L D+ N + + + +E + + Sbjct: 623 ------IRDSASLSHLYRELTDVTNIEWYLSEQERRDLAQLEDVIEQYGDSAVQPPLTPE 676 Query: 632 V--PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 L + VN+ T+ + + F VV + + G + Sbjct: 677 FIDSLEHYDSLFDESGSSPTSQPDVADDAVNVMTIHKSKGLDFPVVLIPQVTAGEW--AP 734 Query: 690 APLGFDLMSQKPKRGDRSRRDDD---------RYLFLEALISAQQKLYISYIGRSIQDNS 740 + +D + G + +D R +F + A+ L + Sbjct: 735 SSRTYDALETSLSDGAEAAFAEDFVERDARETRRVFHVGITRAEDVLVLQGGSEDDDATD 794 Query: 741 ERFPSVLVQELI------DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 S V E++ L D L N+ Sbjct: 795 VHPVSESVDEILPSRIPWQPERGQLPLWADVQDCLPREAVDWTDTLATETVGHVGGTVNH 854 Query: 795 QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLET--------------LQRF 840 E A + E + L L + Sbjct: 855 AGEELAVAAARDRVLDLATATLNGELSPRAERETLQVASLTDPSTPSPSLSHSYTSLAAY 914 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR 900 P + + +++ + S ++Q+ + L + + Sbjct: 915 EECPRSHYLDYVVNAFPDYQETTVRSD--------SGGGVSQREIGLLFHDTAEQAAKQG 966 Query: 901 FRAAGDLPYGAFGEIF----WETQCQEMQQLADRVIACRQPG-----QSMEIDLACNGVQ 951 + GD Y + E ++ DR P E +L +G + Sbjct: 967 VKRRGDW-YEICERLASHRRAEDALTAAKECIDRYFELELPNCEIIDAEREFELDIDGHE 1025 Query: 952 ITGWLPQVQP---DGLLRWRPSLLSVAQGMQL---WLEHLVYC 988 + G++ V DGLL + ++ +L+ C Sbjct: 1026 LVGYIDAVYRTPDDGLLVIDYKATERHRDLEDDKQLPIYLLAC 1068 >UniRef50_Q6BW47 DEHA2B14410p n=3 Tax=Saccharomycetaceae RepID=Q6BW47_DEBHA Length = 934 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 73/490 (14%), Positives = 151/490 (30%), Gaps = 69/490 (14%) Query: 340 SDILELENR--AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 SDIL + + + +S P+ S++ SP++E + ++ ++ Sbjct: 330 SDILNFSEKIMRQQDDRLSKTLKSQMVSSFRPVYSNLK-----SPEQEARWISYQIEHLM 384 Query: 398 EEDPTL-TPRDIIVMVADIDSYSP-FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 ++ +DI V+V +Y I+ F + +PY + A + + A + Sbjct: 385 ALPNSIFKYKDISVLVR--SAYQTRTIENEF----VRKRIPYVMVRGTAFWNRKEVVAIL 438 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 L + S D +A L R I E+ L + + I+ I V + Sbjct: 439 DYLRVIASD---NDRIAYLRTVNFPKR-GIGEKTLASISAELEMEAIKPDIYKRQVYSVL 494 Query: 516 LPATGQHTW-------RFGLTRMLLGYA-MESAQGEWQSVLPYDESSG-----LIAELVG 562 + +T + L + L A M + + ++ L+ Sbjct: 495 QDISNVNTSVKLTSKNQSSLKKYLGFIADMRDILEDVNKISYEEQVGSDSTIEKRNTLLS 554 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE--------TEAAMTLIEQ 614 L L+ + ++ + E + + L F D E Sbjct: 555 KLFELVYVKSGLQKEFQNDPNHELNIMEVQTQLCEFTPKDEELPLYLGGSESDITEDKRN 614 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 + I + ++ R R G V + T+ + + + + Sbjct: 615 FLEKFIQSIGLYETDSTNEKEKEKEI------ALRFPGRIDKGKVALSTIHGSKGLEWPI 668 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI-SYIG 733 V + G++DG+ P + A G +++R F A + LY+ SYI Sbjct: 669 VFVPGLSDGILPAKFAMDT----------GGEEAVNEERRCFYVATTRTKLLLYMSSYIE 718 Query: 734 RSIQDNSERFP----SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR--- 786 + R P S + L + + + + K + Sbjct: 719 QGDIGKWGRKPIDSVSRFISNL-----NHTGMMESKQGAFKDWQMLSKLYNIVNKPLPTG 773 Query: 787 MPFDPQNYQP 796 F+ + Sbjct: 774 QEFNLSQFNK 783 >UniRef50_B6BHP5 Putative uncharacterized protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BHP5_9PROT Length = 783 Score = 89.7 bits (221), Expect = 6e-16, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 100/319 (31%), Gaps = 48/319 (15%) Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA--- 618 L S + + LE L + + E + + + Sbjct: 305 EKLNSSCKAIEQLSQE--NSARLERVGDEIYKELYSIYYKKVEEVDIIKYLYSFLEKSEV 362 Query: 619 ------IIAEGLGAQYG-----DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 I E + + + L QRL I G V + ++ Sbjct: 363 TKVEKKIFNEQVYTLKNILLSMKEMSVKSLISLFLQRLASATIDDV-RGGKVTVMGVLET 421 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDL-----MSQKPKRGDRSRRDDDRYLFLEALIS 722 R+I F V ++ NDG PR+ F M+ P DR Y L + S Sbjct: 422 RAIDFDAVVIVDFNDGNVPRRSDKDMFLNTNIREMANLPTMSDRENLQKHYYEML--INS 479 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQEL----------IDYIGQSH-----YLPGDEAL 767 +++ + S ++ + S ++ L +DY G L ++ + Sbjct: 480 SKE------VAISFVESQQSSASRFLKHLGIKAKNEHEELDYAGVLFDKSAPALKEEKKI 533 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE---WLPAASQAGKAHSEFVQPL 824 + S VK T L T + + Y + E +PA + G A E ++ L Sbjct: 534 AMEYSFKDVKLSATKLKTFLTCKRKYYHKYIEHINSHEIPKDMPAEYEVGTAVHEALKEL 593 Query: 825 PFTLPETVPLETLQRFWAH 843 + ++ L+R + Sbjct: 594 YTKRNSYLSVDDLKRDLNN 612 >UniRef50_A7IDD4 UvrD/REP helicase n=3 Tax=Proteobacteria RepID=A7IDD4_XANP2 Length = 1143 Score = 89.3 bits (220), Expect = 7e-16, Method: Composition-based stats. Identities = 90/660 (13%), Positives = 180/660 (27%), Gaps = 142/660 (21%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVA---DIDSYSPFIQAVFGSAPADRYLPYAISD 441 E L + + E + RD V+ ++ + ++A R +P I Sbjct: 544 EAAGLAASIREL--EGAGVRLRDQAVLCRTNGRLNEIAAALEA--------RGIP--ILH 591 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 + + + LLSL F A++ V + R+ ++ + + + + G Sbjct: 592 LGSLFEREEVRDLLCLLSLAVDPFGD----AIVRVGAMP-RYGLSLQDAYCVSRHLRSIG 646 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 + + + GL Sbjct: 647 ---------------------------------------KPALAGLAEASAAPGLSTAGR 667 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 + L L R + L +L D+ D+ T + Q+ + Sbjct: 668 AGVERLAADLAGLRANASAWDFLATYLLDRTDLAKQLSQADSLTAQMRAVAIWQFLNFVR 727 Query: 622 EGLGAQYGDAV--PLSLLRDELAQRLDQERISQRFLA----GPVNICTLMPMRSIPFKVV 675 E + G + L +R + ++ + Q A V + T+ + + F+ V Sbjct: 728 EQVPVGGGLPIQRTLDRVRQLVLLA-EERDLRQVPAAALHLDAVRLMTVHGSKGLEFEAV 786 Query: 676 CLLGMNDGVYPRQ------LAPLGFDLMSQKPKRGDRSRR---DDDRYLFLEALISAQQK 726 + G+ +P P G + D ++R D++ LF AL A+ Sbjct: 787 HIPGLTVASFPSSNRGQRCPPPRGMVEGAGDLSPADEAKRAHDDEEECLFFVALSRARTH 846 Query: 727 LYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 L + Y R ++ S R S + + + P Sbjct: 847 LRL-YHARKQRNGSGRSASPFLGWIPATLLDEISNP------------------------ 881 Query: 787 MPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVR 846 P A + + + +V L + P R Sbjct: 882 ---------------------PTLPLPAGASTSQPIAIAWPADWSVTDSRLGSYEKCPRR 920 Query: 847 AFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD--AERLFRRFRAA 904 F+ L + + + + L Y + + L + + A+ + Sbjct: 921 FFYTHVLGLGGARKPTAFSR----THDCL--YDLLRWLADTRRTAEPTVADAESAFEKIW 974 Query: 905 GDLPYGAFGEIFWETQCQEMQQLADRVIACRQ-----PGQSMEIDLACNGVQITGWLPQV 959 G G F + +L ++ Q + ID V + Sbjct: 975 GT--RGPTDHAFAADYRRLASRLIGALVRSGAGRRFREAQPLAIDFPNGRVVVEPNELAE 1032 Query: 960 QPDGLLRWRP-----SLLSVAQGMQLWLEHLVYCAS-GGNGESRLFLRKDGEWRFPPLAA 1013 PDG + R ++ L HL + GG + D ++A Sbjct: 1033 LPDGTVVIRRVRTGHKRSDEYDRLEYTLYHLAAESQFGGRAVVQALHLTDETAEAVAISA 1092 >UniRef50_B6IP09 UvrD n=8 Tax=cellular organisms RepID=B6IP09_RHOCS Length = 1178 Score = 89.3 bits (220), Expect = 8e-16, Method: Composition-based stats. Identities = 54/372 (14%), Positives = 114/372 (30%), Gaps = 73/372 (19%) Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 E + D + A+ + L+ + V+V + F F LPY + Sbjct: 752 EEARWVGDEIEAL--QRKGLSLGQMAVLVR-----AGFQTREFEERFITLGLPYRVIGGP 804 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 + ++ L + +++VP + I + LR L G+ Sbjct: 805 RFYERQEIRDALAYLRIVAQPDDDLAFERIINVP----KRGIGDATLRQLYVAARTLGV- 859 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 + + TWR E+ L ++ Sbjct: 860 --------------SLAEATWR------------------------LTETDELRGKVRST 881 Query: 564 LASLLMQLNIWRRGL-AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L +L+ + WR + + + +L+ + + + + Sbjct: 882 LRALMEDIARWRGQIDRTPHT-----DLAQAILDESGYTRMWQQDKSPEAPGRLENLKEL 936 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + L+ + +A +D S V++ TL + + F VV L G + Sbjct: 937 INAMGEFE--NLTGFLEHVALVMDNAEASGLE---QVSLMTLHGAKGLEFDVVFLPGWEE 991 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS-- 740 G++P Q + + G +++R L + + ++++S+ S Sbjct: 992 GLFPSQRT------LDENGIAG----LEEERRLAYVGITRGRIRVHVSHAANRRIHGSWA 1041 Query: 741 ERFPSVLVQELI 752 PS V EL Sbjct: 1042 TSLPSRFVDELP 1053 >UniRef50_C6V4L3 DNA helicase II, UvrD/Rep family, N-terminal n=4 Tax=Alphaproteobacteria RepID=C6V4L3_NEORI Length = 481 Score = 89.0 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 50/370 (13%), Positives = 106/370 (28%), Gaps = 78/370 (21%) Query: 387 EVLHDRLLAMLEEDPTL-TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 E ++ M++E + D ++V + F F A +PY + Sbjct: 186 EQEARAIIRMIKERKLVCRYSDTAILVR-----AGFQTRAFEEAAIHENVPYRVVGGLKF 240 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 + I+ L L + + +++ P + + + L + + E G Sbjct: 241 YERKEIRDVIAYLRLVVNPNDNLAFERIINTP----KRGLGQASLNKIYNYSLEEG---- 292 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 + L Sbjct: 293 --------------------------------------CSMFEAARKLEENEKLKSTALL 314 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 + + Q+ W+ + L + L + E + +++ ++ I Sbjct: 315 TFVKQVRKWQEE-SLNHSLHDLLKKITLESGYISALREQDETRIENVDELFRVIQEFDDA 373 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 + V L E +Q VN+ TL + + F+ V L G DG + Sbjct: 374 TDFLQHVSLLT-----------ESDAQINNTDAVNVMTLHASKGLEFEQVFLPGWEDGTF 422 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF-- 743 P + + +++R L + A++ L I+ R + NS + Sbjct: 423 PHARS------------LFSTEQIEEERRLAYVGITRAKRFLTITSAHRRLIRNSWQNTV 470 Query: 744 PSVLVQELID 753 S + EL + Sbjct: 471 KSRFMLELAE 480 >UniRef50_C1F7R1 ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7R1_ACIC5 Length = 943 Score = 89.0 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 61/184 (33%), Gaps = 22/184 (11%) Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 L E + D + E + + + AQ L+ D Sbjct: 615 PATLPELIKFLIDRSGYIRALEEEATPEAFSRIENLKELANAAQDAQERGE-TLNEFLDH 673 Query: 641 LAQRLDQERISQRFLAGP-VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 + +F A V + TL + + F +V L GM +G++P Sbjct: 674 ----AALVSDTDQFDADARVTLMTLHAAKGLEFPMVVLAGMEEGLFPHSRT--------- 720 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF----PSVLVQELIDYI 755 D ++ +++R L L A L ++ + ++ PS ++E+ ++ Sbjct: 721 ---LTDPNQMEEERRLCYVGLTRAMDSLILTRARYRRRYGNDMPEASTPSRFLEEIPAHL 777 Query: 756 GQSH 759 ++ Sbjct: 778 LENL 781 >UniRef50_Q2S1K7 Putative uncharacterized protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S1K7_SALRD Length = 1073 Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 91/609 (14%), Positives = 163/609 (26%), Gaps = 71/609 (11%) Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 + +EV+ L LL D + ++ + VA Y I A Sbjct: 295 QEVHVRRAVGSAKEVDALVRDLL-----DADVPFDEVEIAVAGEQPYVSLI----ADRAA 345 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 LP +I+ + A ++ L F ++ +L L + Sbjct: 346 RVGLPVSIATGVSAGQTRTGTALLAFLEWVTEDFDPAVLIRMLRSGHLR---------ID 396 Query: 492 YLR-QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 +R + NE+G G + + L A R G + LG A+ + + Sbjct: 397 RMRSEMENETGA--GSLEAHEVATLLAARRYEPGRDGYAK-ALGAAIGELEDRIAELEE- 452 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGL-AQERPLEEWLPVCRDMLNAFFLPDA------ 603 + +L L +E ++E + + F D Sbjct: 453 QGLEPERDRERRRALRFVARLVEALLDLVPREASVQEMAARAQRFVERFGPVDPPPEDKP 512 Query: 604 ETEAAMTLI-EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR-FLAGPVNI 661 E + + + + L L + L+ + + G ++ Sbjct: 513 EADRTLDEAGRTVLWQRLDRLVRVPVDYEASGPQLAALLRRWLEGQYVRAEHPRPGTAHV 572 Query: 662 CTLMPMRSIPFKVVCLLGMN---------DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 L + ++GM+ +G R RS D+ Sbjct: 573 VPLESAGYGARSHLYVVGMDSDTLSTAAVEGAMLRDPDRRALSDSMDGELPERRSASDEA 632 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY-IGQSHYLPGDEALNCDE 771 ++ +AL L + + ER+PS L L + +S G Sbjct: 633 QWHHEQALARHTGVLSLYTRIFDLDSGEERYPSPLFLRLAEAPTVESERTEGIVPTGERT 692 Query: 772 SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE- 830 ++A LT R + S WL A +A L E Sbjct: 693 RLNDMEAWLTAFRNRGGEGRGTGTARDALSDCYPWLRRGEDARQARQSDAYTAHDGLLEA 752 Query: 831 ----------------TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 + L+ F P F + L V E + D EP L Sbjct: 753 GTYPELDFLRDRENGGPMSAGRLETFAETPYLYFLKYVLGVEPLDEPAL--DDEP-WLNA 809 Query: 875 LSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC 934 L R I A + R + P + +T + ++V Sbjct: 810 LRRGSILHATFEAFM---------TTLREGDERPAAEHEPLLEDTLQAAFKAETEQVAPP 860 Query: 935 RQPGQSMEI 943 + Sbjct: 861 SDVVEEAAF 869 >UniRef50_A4REL5 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea RepID=A4REL5_MAGGR Length = 819 Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 59/466 (12%), Positives = 131/466 (28%), Gaps = 65/466 (13%) Query: 381 SPQREVEVLHDRLLA-MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 + +E E + L +L + D+ +++ S I++ G A +PY + Sbjct: 310 NSAQEAEWIVAELRRTILLSGDMMNHDDVAILLRSAAL-SRHIESALGKAG----IPYRM 364 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 ++ + L + ++ + +++VP + + ++ L + + Sbjct: 365 VGGFKFYERAEIKLILDYLRVVYQPDNNDALARIINVP----KRGAGDATIKALLEEAEK 420 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 S + + + + T R + + + G + L D + Sbjct: 421 S--QQSLWSLLRKHCTGGKQAKTTLRKQVEQKISGGLIR---------LILDIRKKMDES 469 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ-- 617 + S+L ++ L ++ +D N + + + Sbjct: 470 TAENPYSMLDVISQVLSRL-------DFEQHLKDTYNDEWEGRWANVQEFINLATDFMTG 522 Query: 618 -AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP----VNICTLMPMRSIPF 672 + E P + Q G V + T+ + + + Sbjct: 523 NEVEEELPEIDGLQQTPERDTLARFLANVSLATDVQNNDPGQNRPMVTVSTIHAAKGLEW 582 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 VV + +G P + G D++R L A+ A+ LY+SY Sbjct: 583 PVVFIPAAYNGSIPHIRSEDG----------------DEERRLLYVAMTRAKALLYLSYP 626 Query: 733 GR-SIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT--CLHTRMPF 789 + + S + + + L R KA PF Sbjct: 627 VVGGYGNGEKVTLSSFLSGVEGHFAVQGPTFNSAVLEELARILRRKAPSQKDVFGRLKPF 686 Query: 790 -----------DPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 DP+ S W ++A K + Sbjct: 687 EVSMEDDIFPSDPEQDLGIRVHSVIASWQRLKNRAAKPRHWPEESA 732 >UniRef50_A6NZ65 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZ65_9BACE Length = 830 Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 59/434 (13%), Positives = 135/434 (31%), Gaps = 70/434 (16%) Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 + + + E + + ++L +D V+ +++ S I+ F Sbjct: 388 DKVQCYTAMNEHDEAQYVAAQILGSFSA--GRHWKDHAVLYR-MNAQSNQIEQAFKRNG- 443 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +PY I ++ ++ L + ++ + +++ P I + Sbjct: 444 ---VPYRIIGGIRFFDRAEIKDMLAYLCVINNPGDDLRLQRIINNPP----RGIGATTIE 496 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 A + + W+ ++ Sbjct: 497 R---------------------------------------AQTIAAQEGRSLWE-IISNA 516 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + + LAS + R+ + + + A L T T Sbjct: 517 RVYPELQKAAAKLASFTDMIAELRKLSGEMELPAFYEELVARTGYAVMLEQKNTIEDRTR 576 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 +E + + + + L+ DE+ L + S V + T+ + + Sbjct: 577 LENVQELLTSINGYLENAVEPSLAGFLDEI--ALYTDLDSHDPEEDCVVMMTMHSAKGLE 634 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F VV ++G+ +G++P A G+ +++R L A+ A++KLY++ Sbjct: 635 FPVVFVVGVEEGIFPGIRA------------IGEAEEMEEERRLCYVAMTRAKEKLYMTC 682 Query: 732 IGRSIQDNSE--RFPSVLVQELI-DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP 788 + + PS + E+ +Y+ +S LP E + + K R P Sbjct: 683 ASQRMLFGRTNNNRPSRFLGEIPEEYVEKSGRLPRSERTEEKQDGEQPKKK--APAWRKP 740 Query: 789 FDPQNYQPGERQSY 802 + G +Y Sbjct: 741 AERGYSLGGGYTTY 754 >UniRef50_A1SGT7 UvrD/REP helicase n=1 Tax=Nocardioides sp. JS614 RepID=A1SGT7_NOCSJ Length = 1060 Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 100/686 (14%), Positives = 188/686 (27%), Gaps = 84/686 (12%) Query: 334 LLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL 393 LL Q L + +P D + + + E E L D L Sbjct: 302 LLIASQRVAGRLALPGSIPEEARSAFLAPEAQPNPLGDGRVLVRTFDTERAEAEHLAD-L 360 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 L + + + V+V + P ++ G+A + SD P + Sbjct: 361 LRRAHLEDDVPWDQMAVLVRSGRTSIPPLRRALGAAGVPVEV---ASDEVPLVRDPAVLP 417 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 + L LD + E+G W +D Sbjct: 418 LLDALRAVVD----------LDTRP----------DEGEVEHVAPENG--WSLDPARAEG 455 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE-------------SSGLIAEL 560 L L G E QG+ ++ P GL Sbjct: 456 LLLGPLGGLDAGDLRRLARRLRTREKEQGKAEARTPRTSRDLVRRVVVEPGFLDGLDGPE 515 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVC-------RDMLNAFFLPDAETEAAMTLIE 613 V +L L R L EE L + + L A ++ Sbjct: 516 VVRARALAQLLLDAREALRVGASAEELLWTLWSRTGWPARLRRSVDLGGGAARRAHRDLD 575 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL--DQERISQRFLAGPVNICTLMPMRSIP 671 + D V + L Q+ + V + T + + Sbjct: 576 SVCALFDVAARADEQRDHVGVRAFLATLVQQQIPADTLAERGARGAAVRLLTAHRAKGLE 635 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG------DRSRRDDDRYLFLEALISAQQ 725 +++V + + +P + + G R ++R LF A A+Q Sbjct: 636 WRLVVVAHVQQDGWPDLRRRSTLLQADRIGEHGVVPPVSTRELLMEERRLFYVACTRARQ 695 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 +L ++ + + PS + EL + + P L+ A ++ L T Sbjct: 696 RLVVTAVASPDDEGE--QPSRFLDELGVGVERVVGRP-PRPLSLPGLVAELRRTLADPET 752 Query: 786 RMPFDPQNYQPGERQSYAREWLPAASQAG-KAHSEFVQPL-PFTLPETVPLETLQRFWAH 843 P + R + +S G +A + V+P+ P V L+ Sbjct: 753 SEPLREAAARRLARLAPEVRIADPSSWWGTRAATRSVEPIRDPGQPVPVSASVLEAVAVC 812 Query: 844 PVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE------QDDAERL 897 P + F + + R S L L + + Q++ +E + + + Sbjct: 813 PTQWFLEREAGGSARAHQSA-------NLGELL-HALAQRVAAGELEPAVEVLMEHVDAV 864 Query: 898 FRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD-------RVIACRQPGQSMEIDLACNGV 950 + R + + + +IA P ++ V Sbjct: 865 WDRLDFRTPWSRA----REHDRVRAAIGRFLQWHLANPRELIATEAPFTTVVALEGGEQV 920 Query: 951 QITGWLPQVQPDGLLRWRPSLLSVAQ 976 +I+G+ +V+ D L + Sbjct: 921 KISGYADRVELDADGHVVVVDLKSGR 946 >UniRef50_Q8L1N1 DNA helicase (Fragment) n=1 Tax=Buchnera aphidicola (Pemphigus spyrothecae) RepID=Q8L1N1_BUCPS Length = 190 Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 65/174 (37%), Gaps = 20/174 (11%) Query: 614 QQWQAIIAEGL-GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 I + L G + + LS + + R ++ + +++ TL + + F Sbjct: 25 DTLVKWIKQMLTGNEIEKPLNLSEIVAKFILRDIVDKKEENTHINTIHLMTLHASKGLEF 84 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 V ++GM +G+ P + + D++R L + A+++L++SY Sbjct: 85 PFVFIIGMEEGILPHHSTIIS-------------NNIDEERRLVYVGITRAKKELFLSYC 131 Query: 733 GRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 + Q + PS + EL + L N + ++L +H Sbjct: 132 KKRYQYGTILYPEPSRFLFEL----PKQDILWEKNNRNQNYKNKISNSYLNIIH 181 >UniRef50_C9RM93 UvrD/REP helicase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RM93_FIBSS Length = 843 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 76/226 (33%), Gaps = 18/226 (7%) Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL-AQERPLEEWLPV 590 +L W ++L +G A L + W+ + + E PL Sbjct: 456 VLAKVKAGEGSFWDNLLAEANGTGRGAP---KLKVFTDLVTNWKNMMTSGEYPLPILAEH 512 Query: 591 C--RDMLNAFFLPDAE-TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 F + E T + I E G + + L+D L Sbjct: 513 IINDTGYKDFLRKEDEVTADERIANLDEMINAIREFDEEHPGATLD-AFLQDI--SLLTD 569 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 G V + T+ + + F V L G +D ++P + M++ Sbjct: 570 GDKKVDTSKGLVTLMTIHMAKGLEFNTVHLAGCDDEIFP-LVRGTSMLSMAEI-----NE 623 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQEL 751 + +++R LF A++KLY+ + R + R PS ++EL Sbjct: 624 QMEEERRLFYVGCTRAEKKLYLYHAERRFFQGNIRPFAPSRFLKEL 669 >UniRef50_Q2SKI4 UvrD/REP helicase family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKI4_HAHCH Length = 631 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 62/422 (14%), Positives = 128/422 (30%), Gaps = 105/422 (24%) Query: 332 DNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHD 391 D++ H +Q DI R D + F + E + Sbjct: 314 DSMPHRLQDDIAM--------------------RAHKSGDGVVQFASPLNVMTESNEVAA 353 Query: 392 RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVL 451 + +L D +P +I V+ + +S I+ A R +PY +++ Sbjct: 354 NIQTLL--DAGTSPDEIAVLYRE-NSQRLHIE----QALIARRIPYLVNEGVPLMRRRGP 406 Query: 452 EAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 +SL P S + P+ +YL +N S I I + Sbjct: 407 RMLLSLCLAPSSS----------ESPL----------EEKYLEYILNHSRI--NIQWRHK 444 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 + + + ++ + ++ G + E + + + Sbjct: 445 KSGKY----------------------KDEAIFKYLQFISDADGSLGEKATDIIRDIRLI 482 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 + + W + R F E+ A +I+Q + Q + Sbjct: 483 KKLNHCPPSQVEEQLWEILLRHTY--FSREGMESLPAKVVIQQLLDGLKKGVALEQSAEE 540 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 + S++ + +++ T+ + F V L+ Sbjct: 541 L--------------LAINSEKTESDKIHLMTIHASKGTEFDTVFLINAT---------- 576 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 +S +R D R+++R +F AL A+ +L+IS + + PS + EL Sbjct: 577 -----LSDHKERDDN--REEERRVFYVALTRAKNRLHISCPQYNER-GLPLQPSPYIAEL 628 Query: 752 ID 753 Sbjct: 629 RR 630 >UniRef50_UPI000050F875 UvrD/REP helicase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F875 Length = 1061 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 119/842 (14%), Positives = 242/842 (28%), Gaps = 132/842 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 PA R + ++ + + LF+S VG+P A +G G + Sbjct: 260 PAARRAEQHRWKIVLLDEFQDTSVAQLKLLRDLFHSTAVTAVGDPRQAIYGWRGASADNM 319 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSD--ILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 + F DV L + ++D IL + NR G+ + + D Sbjct: 320 IRFSSD------FHDVESLTLSTSWRNDHRILTVANRTANGLAGSRETPLSARTGAGEGD 373 Query: 372 SSITFHV-CHSPQREVEVLH---DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 +I H P + L L + P + V+ ++P + A Sbjct: 374 VAIDISSGAHDP----DFLTVGLRSLTEWVASLPDGSST--AVLCRKRAHFAP-VAAALE 426 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 +A + + S P + ++L+ + ++ L+ + Sbjct: 427 TAGYAVH----VHGSSGLLSDPFVADLRAVLTAAVDPMAGDSLMRLIS----GRLLGLGA 478 Query: 488 EGLRYLRQWVNE---SGIRWGIDDDNVRELELPAT-GQHTWRFGLTRMLLGYAMESAQGE 543 + L+ + S + + +D +P Q T GL ++ + S + Sbjct: 479 TDIAALQSFTRRQNDSRVTEFLGEDPENSGVVPENIDQATIVEGLDELVDLFEALSGSAK 538 Query: 544 W---QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + ++++ +SGL + L L L R G + + + Sbjct: 539 FPGARAMVSNFRNSGLSELALKRLVRLAQALRHVRSGSGTIASIIRTAMTETGVDTDIWG 598 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP-LSLLRDELAQRLDQERISQRFLAGPV 659 + + ++ A +VP + ++ A + Sbjct: 599 LSDSLRNLHRSAIDSFLSAASQYSAADDQPSVPGFLEWLSLMEEKDALSVAEPNSAAEAI 658 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ----KPKRGDRSR------- 708 +I T+ + + F V + + +P M + P RGDR+ Sbjct: 659 DIMTVHASKGLEFDAVAVPSLVVKDFP-TSPRDPEGWMERTALPYPLRGDRAHLVDYDLR 717 Query: 709 --------------------------RDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 +++R L A A+ L++ + N Sbjct: 718 TADFDTKKALDEWVNEFIKPAIADAHEEEERRLAYVAFTRAKHHLWLGAELMGARAN-PD 776 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDE---------------SEARVKAHLTCLHTRM 787 PS + E I+ + +P + ++ S AR A Sbjct: 777 EPSPFLMEAIEELNLDVDMPEPADESAEDRVETSVWPVPRTALVSTARRAAEWVSRAAPT 836 Query: 788 PFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRA 847 +P YAR+ L +S+ + + +P+ + L + P Sbjct: 837 GLSELAQKPTPVGQYARQALRISSRPEREGT-------GAVPDRLSATALVSWRRDPND- 888 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDL 907 F + L+ F + Q A ++ +D +++ Sbjct: 889 FMKQTLRPVPSPPSRAAEIGTTF------HSWVEQHFGQASIDIEDEQQVR--------- 933 Query: 908 PYGAFGEIFWETQCQEMQQLADRVIACRQPGQ-SMEIDLACNGVQITGWLPQVQPDG--- 963 E Q A R M +L ++ G + V G Sbjct: 934 ---PIDTATIERLQQT---FIGSEFASRHADHIEMSFELVLGRFRVPGKIDAVFITGDHA 987 Query: 964 -LLRWRPSLLSVAQGMQLWLEHLVY---CASGGNGE------SRLFLRKDGEWRFPPLAA 1013 ++ W+ S L + +++ L + E + F+ D RF L Sbjct: 988 EVVDWKTSKLPEEKTLEVMKWQLALYRFAIQRVHPEITEVTGTFYFVGSDDIVRFTHLPE 1047 Query: 1014 EQ 1015 E Sbjct: 1048 ET 1049 >UniRef50_Q2RLV0 UvrD/REP helicase n=2 Tax=cellular organisms RepID=Q2RLV0_MOOTA Length = 1232 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 57/356 (16%), Positives = 99/356 (27%), Gaps = 87/356 (24%) Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR-QSHPVLEAFISLL 458 D DI V+ ++ F LPY I R + + PV EA Sbjct: 931 DGAYGFSDIAVLCR-TGHQLKALEECF----LKEGLPYRIVGRESFLEERPVREAL---- 981 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 L P E+ L+ G V E Sbjct: 982 ----------AFCRCLVNP---------EDDFHLLKYL--------GSGSAGVGEEVAIQ 1014 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + + G+ L+ I EL G L + + L +R L Sbjct: 1015 VRETALKRGVPAWLV-----------------------IRELAGELQNFINSLEAYRAAL 1051 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 ++ P + L D + + + + +++ + A G Sbjct: 1052 DKQSP----AELLARWAGEHGLLDEPSISRLLRVAERFPDLSAFLRGVVLAGEADHE--- 1104 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 + V + TL + + F V + G+ DG+ P + P G L Sbjct: 1105 ---------RPGNNGASPEVVTLMTLHAAKGLEFPAVFIAGVEDGLLPLKEGP-GVTL-- 1152 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELI 752 ++R LF + A++ L + R + PS + E+ Sbjct: 1153 ------SPEEMAEERRLFYVGMTRARELLVLVSSRRRELRGTVVPAEPSPFLGEIP 1202 >UniRef50_A8HYL6 DNA helicase II n=8 Tax=Rhizobiales RepID=A8HYL6_AZOC5 Length = 835 Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 53/427 (12%), Positives = 119/427 (27%), Gaps = 75/427 (17%) Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 E + D + A+ L I ++V + F F L Y + Sbjct: 393 EEARAIGDEIEALQRAGHAL--SQIAILVR-----ASFQMREFEDRFVTLGLNYRVIGGP 445 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 + ++ L S +++VP + + + ++ +R +G+ Sbjct: 446 RFYERAEIRDALAYLRCVISPADDLAFERIVNVP----KRGVGDAAIKQIRDVARAAGV- 500 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 ++ ES L +L Sbjct: 501 --------------------------------------PLMEATRLLTESEELKPKLRST 522 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 L + WR + + +L+ + + + + + Sbjct: 523 LRGFVQSFERWREQAEN----MKHTELAEVVLDESGYTEMWQKDRSAEAAGRLENLKELV 578 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 + + + + ++ +D + + V I TL + + F V L G +G Sbjct: 579 RSMEGFENLSG--FLEHISLVMDVDSGAG---DDAVQIMTLHSAKGLEFDTVFLPGWEEG 633 Query: 684 VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SE 741 ++P Q A + ++ K G +++R L + A+ + + + Sbjct: 634 LFPHQRA------LDEQGKAG----LEEERRLAYVGITRARASARVYFASNRRIHGMWNS 683 Query: 742 RFPSVLVQELIDY---IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE 798 PS + EL D + +S G + PF PG Sbjct: 684 TVPSRFLDELPDTHVDVQESKGGFGWGGTTGGYGGGNSYGASRFDNPA-PFASSYATPGW 742 Query: 799 RQSYARE 805 +++ Sbjct: 743 QRAQNAR 749 >UniRef50_C5MA33 Predicted protein n=3 Tax=Candida RepID=C5MA33_CANTT Length = 935 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 60/395 (15%), Positives = 126/395 (31%), Gaps = 51/395 (12%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E+E +LLA+ + + DI ++ + + R +PY + R+ Sbjct: 374 EIE----QLLAL--PNSPIKFEDIAILFR-----ASSQTKIVEDELRLRKIPYRLIQGRS 422 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 + + + L + D+ ++L AR + E+ + ++ E I+ Sbjct: 423 FWERKEVVSTMDYLKVCG---DENDLFSVLRTINFPAR-SLGEKTAGPIIAFI-EKNIKN 477 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYA-MESAQGEWQSVLPYDESSGLIAELVGH 563 G+ + L +L GY + E ++ L E Sbjct: 478 GLSVHDCLRLVANGKDGSKLSTRTRNILKGYVNIIDTAQERMKIMETCSGESLRHEAARL 537 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF--FLPDAETEAAMT---------LI 612 + + + + EE ++ +F F+P ET Sbjct: 538 FQDIYDGSTLDKEFRKNAKDYEERRMNVEELSKSFIEFVPREETLPPYNGEIDGEFTPDK 597 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 I + + ++ + +Q S +++ T+ + + + Sbjct: 598 RNFIMQYIESIG--LFDSSAVTESGENKGIENEEQGENSVVPEFKGISLSTIHGSKGLEW 655 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR----RDDDRYLFLEALISAQQKLY 728 VV + G++DG+ P + A GD S+ +++R F A A+ LY Sbjct: 656 PVVFVPGLSDGILPARFAVNS---------NGDPSKSAESINEERRCFYVATTRAKTLLY 706 Query: 729 ISYIGRSIQDNSER--------FPSVLVQELIDYI 755 IS + PS + ++ D I Sbjct: 707 ISGYSSDSGYSYGSNYSRTFHCPPSRFITDIGDNI 741 >UniRef50_UPI000169433B UvrD/REP helicase n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169433B Length = 608 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 53/455 (11%), Positives = 132/455 (29%), Gaps = 63/455 (13%) Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY-AISDR 442 E E + + + + + DI ++ SYS +A F + +P+ + Sbjct: 63 HEAEAILEHIKQQVGKGK-RKYGDIAILHR-TASYS---RAFFERLLME-DIPFVQYGNS 116 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 H ++ ++ L L + + +L +A E G Sbjct: 117 DLFYRHWLIRPVLNHLRLALNSRDMKACEGVLLTLYIAK-----------------EKGA 159 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 W + + + + P ++ + +L+ Sbjct: 160 SWIREKEKKKAKKWP-------------LIHLMDHPDLK------------ENQKEKLME 194 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L ++ + E + + D + P+ +T+ +++ + Sbjct: 195 RL-----KMIKSLQAFKPEEAIRQIRIKFYDAFIDAYDPEPDTQYK-ETLKEMLDELETS 248 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + L + + + E + + + + + T+ + + F VV L+G+++ Sbjct: 249 ARRFTGLEEF-LGFVDRITDKYMVMESLKKEDESDALKLMTIHRSKGLEFPVVYLIGVSE 307 Query: 683 GVYPRQLAPLGFDLMSQK--PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 V P + + + G + +++R L A+ A+++LYIS G Sbjct: 308 RVLPHSTSLKKEGCKDNRFEGEHGAAAALEEERRLAYVAVTRAKEELYISSPGY--YRGK 365 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 + S + + + + + D + Q Sbjct: 366 QAHVSRFILQPFESRRSRVSNTAQPVPASAAKKPSAIQDRSMPEMGNASDK---KTVRTQ 422 Query: 801 SYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLE 835 Y + +SQ + L L Sbjct: 423 VYTAGYGTNSSQPERKARHDQPKLVSPAASVTSLS 457 >UniRef50_A6BB03 ATP-dependent DNA helicase rep (Fragment) n=3 Tax=Gammaproteobacteria RepID=A6BB03_VIBPA Length = 362 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 79/260 (30%), Gaps = 23/260 (8%) Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM-----LN 596 +++ L + +L L + +E + RD+ L Sbjct: 1 SLFEASFEMGLEQHLSGRGLENLRRFTQWLVAIADQAERGNTVEAVRSLVRDIHYEDWLY 60 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV-PLSLLRDELAQRLDQERISQRFL 655 E M + + I+A+ G Y L + L R ER + Sbjct: 61 ETSASPKAAEMRMKNVSDLYSWIVADLEGDNYDQEEKTLKEVVQRLTLRDMMERGEEDED 120 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 + V + TL + + F V L+G +G+ P Q + ++ +++R L Sbjct: 121 SDAVQLMTLHASKGLEFPYVYLIGSEEGILPHQTSIDEDNV-------------EEERRL 167 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFP--SVLVQELIDYIGQSHYLPGDEALNCDESE 773 + AQ++L + Q P S + EL + + ++ +E Sbjct: 168 MYVGITRAQRELTFTMCKERRQFGELIKPTQSRFLDELP--FDDVEWEVNKKPVSQEERM 225 Query: 774 ARVKAHLTCLHTRMPFDPQN 793 A+ Sbjct: 226 AKGDTQYEDDTPLATMHLVY 245 >UniRef50_Q9K8M6 ATP-dependent nuclease subunit A n=1 Tax=Bacillus halodurans RepID=Q9K8M6_BACHD Length = 1129 Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 88/743 (11%), Positives = 215/743 (28%), Gaps = 180/743 (24%) Query: 362 DNKRPLDPLDSSITFHVCHSPQRE-------VEVLHDRLLAMLE-------EDPTLT--- 404 + P D ++ H+ + ++E + DRLL M+ + Sbjct: 478 PAREPEKEDDIRVSLHITKTTEKEKDNDQVPYHHIADRLLEMVRTGEPTVWNGESWRSPN 537 Query: 405 PRDIIVMVADIDSYSPFIQA---VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 D+ +++ ++ A +D+ +PY + + F++LL Sbjct: 538 WGDMAILIP--------VRTELLALERALSDKGIPYHVYGGVGFYERQEILDFVTLLRWL 589 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 D F + ALL P F +T + L Sbjct: 590 DRPFEELYLFALLRSP----MFGLTLDDL------------------------------- 614 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 F R S + W ++ E + L AE + + +L W Sbjct: 615 ---MFVKERF-------SDELTWFDIVVDKEMASLFAERPVVTDAFV-RLRTWLDRWVPF 663 Query: 582 RPLEEWLPVCRDMLNA-------FFLPDA-ETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 RP+ + ++ + F + + + + L Sbjct: 664 RPVPSLIDHLYELFDQTGLKMSLFVQENGMQKVRNVEKLIDVMSGWKTNVLEELLQR--- 720 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND----------- 682 L++ E+ + + E ++ V+I T+ + + F +VCL ++ Sbjct: 721 FDLIQAEVEK--EGEAEVEQVAGNVVHIMTVHASKGLEFPIVCLPQLDRVPQRDKGQVRY 778 Query: 683 ----GVYPRQLAPLGFDLMSQKP-------KRGDRSRRDDDRYLFLEALISAQQKLYISY 731 G+ R ++ + ++ D + +++ LF A A+ L+++ Sbjct: 779 DREMGIVLRHEWEEDDGVVKLETPAFALVKEQADLATMAENKRLFYVAATRARDYLWMT- 837 Query: 732 IGRSIQDNSERFP-SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 E+ S + E+ + + + L + D + + P Sbjct: 838 -------GKEQPSTSSWLYEVEEALEEMPELRSHLKIEEDVASHDRWEKDIQTYKVPPIV 890 Query: 791 PQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQ 850 P+ + + + F PV + + Sbjct: 891 PR---------------------------------QPELVPLSVTEMMTFIQDPVAYYER 917 Query: 851 MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYG 910 L + + E ++ + ++ + + AA D Sbjct: 918 YILGIETSVQHEAKTKQEDSNIDPSKVGSLAHKVFELVDQGVTLAGSIEMTLAAHDW--- 974 Query: 911 AFGEIFWETQCQEMQQLADRVIACRQPG--QSM----EIDLACNGVQITGWLPQVQPDG- 963 + + + +Q+L V + + + G +I G + ++ + Sbjct: 975 --TQDERKHYEEHIQRLFRGVNQHSLQWFGEPVANEWAFSFSFEGAEIVGEIDKIVKNEN 1032 Query: 964 ---LLRWRPSLLS--VAQGMQLWLEHLVYCASG-------GNGESRLFLRKDGEWRFPPL 1011 ++ ++ + + A+ ++ + L A + LF+ +D + L Sbjct: 1033 EYHIIDFKTNQIRRSGAELLRFYEPQLALYAEAYEQLCHVPVKSASLFVVRDQQQPLHSL 1092 Query: 1012 A-----AEQALHYLSQLIEGYRE 1029 + ++ QL++ + Sbjct: 1093 TDRSNVIARVRKHVQQLVDLRKR 1115 >UniRef50_C4Z7Y1 DNA helicase II / ATP-dependent DNA helicase PcrA n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z7Y1_EUBE2 Length = 717 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 49/368 (13%), Positives = 113/368 (30%), Gaps = 76/368 (20%) Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 + D +L + ++ + D ++V A R +PY I Sbjct: 353 IADTILDNVAKN--MKYSDHTILVRAASQTRSL-----EEAFIKRKVPYKILSGAKFYES 405 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 + +S + + + D + LL + R ++ + L+ ++ Sbjct: 406 EEIRTVLSYMRMV---YSLTD-MDLLYT-ISRPRRGFGKKSVEKLKNAAAQNN------- 453 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 + L G +E ++V+ Y + + Sbjct: 454 -------------CSLFKAL-----GKQIEDGDITQKNVIEY--------------YNAI 481 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 +L+ + + C DM L + + + + + I L Sbjct: 482 SELH----DTYVTYTCTDIVNKCLDMGYRKALEQDIDQTRLDNVSELIRTIT--ALEEDN 535 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + V L+ L A Q+ + V + T+ + + F V + G+ +G +P Sbjct: 536 QEKVELADLLSHFALFSAQDEDGEY---NVVKVMTIHTAKGLEFDTVFVPGLVEGQFPSS 592 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS-YIGRSIQDNSERFPSVL 747 + + +++R L A+ A+ LY+S Y + + PS Sbjct: 593 -------------RLRNEDEYEEERRLLYVAMTRAKNMLYLSTYRKKDGRF--AARPSAF 637 Query: 748 VQELIDYI 755 + ++ + Sbjct: 638 LSDIDTNL 645 >UniRef50_D2MLK1 DNA helicase, UvrD/REP type n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MLK1_9BACT Length = 1180 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 77/595 (12%), Positives = 172/595 (28%), Gaps = 93/595 (15%) Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 + + DI +++ ++ P I+ A + +PY + + + L+ Sbjct: 554 ERPIQYDDIAILIR-ARTHLPDIE----HALLEAGIPYLTTGGIGFYQRQEIYDIWNYLN 608 Query: 460 LPDSRFVSE-DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 ++ S + A+L P F I++ L + + + +E + Sbjct: 609 FLNNPSDSNISLAAILRSPA----FGISDAELYEIS-----------LQKETKQEKKSFW 653 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 ++ ++ E+ +P + G I G L Sbjct: 654 DKTLDYQGCTEQLRCAIDTLKTHIEFARRMPVNRLVGTIVNETG-----------LIGTL 702 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 + ++ + +L+ D + Q I + Sbjct: 703 RTGKQGKQRWANYQKLLDLARNFDGDENR------QILPDFIDFLDILITEEP------- 749 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL-----GMNDGVYPRQLAPLG 693 + + + +G V I T+ + F VV L G D P A G Sbjct: 750 -------REGQAPIKASSGAVQIMTVHAAKGKQFPVVMLPRLDKKGQTDQE-PFIDAEFG 801 Query: 694 FDLMSQKP----------------KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ 737 P R + + + LF A+ +L +S R Sbjct: 802 IGFSPLHPANDYQKTEPAIVNFMKSRANEKNVAEKKRLFYVGATRAEDRLILSGTLRDNS 861 Query: 738 DNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG 797 + + ++ + L D + ++ + + H +P Sbjct: 862 KPQQML--EWLYTHLEIGEADNLLNLDVKQDVYKNGSTIDQHFRLQ---IPISRTLTDTT 916 Query: 798 ERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNF 857 + + + E +P + P +P + L + P+R + L++ Sbjct: 917 DTDAASDETMPIEFPEDLPSALQ----PTEVPTALSAPELANYARCPLRYQLENVLRI-- 970 Query: 858 RTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRF-RAAGDLPYGAFGEIF 916 + PD++ ++ Y + Q + E D + L R +A + P A E Sbjct: 971 PSIKQAEPDSDENEMKNAILYVLMQ-----IREPSDTQNLDTRIQQAFENFPEIADAETE 1025 Query: 917 WETQCQEM--QQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRP 969 +L + + + I +G + G + ++ D W+ Sbjct: 1026 LRKHINSFLDSELGQTALRASETETNQHIYADVDGHILDGRIDRLFRDETGHWQA 1080 >UniRef50_C0ERA8 Putative uncharacterized protein n=1 Tax=Neisseria flavescens NRL30031/H210 RepID=C0ERA8_NEIFL Length = 342 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 67/199 (33%), Gaps = 23/199 (11%) Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA-- 621 L+ L + + L + + + + + +++ A I Sbjct: 64 FVRLIEALRNQVGQMPLPEIIAGILKD-SGLTEYYQTQKGDNQDRLDNLDELVNAAIEFK 122 Query: 622 ------EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 E L D +L L+ + + T+ + + F V Sbjct: 123 PEDSNFEILSDNISDDPAFPILAFLSNAALESGENQAGAGEKAIQLMTVHAAKGLEFNAV 182 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 L GM +G +P +++ +R +++R L A+ A+++LYI+ + Sbjct: 183 FLTGMEEGRFPSEMS------------LAERGGLEEERRLMYVAITRARKRLYITMAQQR 230 Query: 736 IQDNSERF--PSVLVQELI 752 + +F S V+E+ Sbjct: 231 MLHGQTQFGIVSRFVEEIP 249 >UniRef50_A9WPI8 ATP-dependent DNA helicase n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WPI8_RENSM Length = 1080 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 98/694 (14%), Positives = 194/694 (27%), Gaps = 96/694 (13%) Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 EL RA G S + + + E + + DR+LA ++ Sbjct: 356 ELNRRAEQGHAESSTQLSPLQPRPGAPRGEVELSRFGTENEEAQAVADRILAR----RSV 411 Query: 404 TPRDI--IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 +D+ ++ + +A + + Y I + P + +S L + Sbjct: 412 RSQDVSVAILCRRRTQFQAL-----QTALEAQNIDYEIVGLSGLLATPEVIDVVSTLRVL 466 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 S+ ++ L+ AR+ I + L L W ++ + P Sbjct: 467 VDPTRSDALMRLM----TGARWRIGSKDLMALADWS-----KFLVASAKRARKASPTVID 517 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 +E+ P D + L A + L +L +L RR + + Sbjct: 518 DVAEAA-------SLIEAIDALDADYWP-DSARELSATGLQRLLALRDELRTLRRFVGDD 569 Query: 582 --RPLEEWLPVCRDMLNAFFLPDAETEAA---MTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 + E + P A + + + + + Sbjct: 570 LLSLISEVERTILLDIELAAKPGISYHRARHHLDAFQDAASSFLQSAERVDVLAFLAWLS 629 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP----- 691 D L+ + +G V + T+ + + + V + G+ +P A Sbjct: 630 AADGEEGGLEMLPV--EPKSGAVQLLTVHAAKGLEWDEVYVPGLATKSFPSDRADHWGTG 687 Query: 692 ----------LGFDLMSQKPKRGDRSR----------------RDDDRYLFLEALISAQQ 725 DL K + D+ ++R L A A+ Sbjct: 688 NRALPWPLRGDRADLPEWKLQGEDQRTWIGELAEFTESVKDHALQEERRLAYVAYTRARS 747 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 L +S + + S + EL+D Q +E + Sbjct: 748 FLAVSTSKFAGTSVRAKEISPFLTELVDVAEQESAASYGLGFRHWPAEQHLPEENPEREA 807 Query: 786 RM----PFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFW 841 + PFDP G + + A Q + P + L L W Sbjct: 808 VIRAQWPFDP---LAGPYLKIGEKVVEPLGSRRAALLSAAQRVQAARPSELSLPELSARW 864 Query: 842 AHPVRAFFQMR------LQVNFRTEDSEIPDTE----PFILEGLSRYQINQQLLNALVEQ 891 + + R + V T S E P + R + ++ A + Sbjct: 865 GIEAKRLLEQRTVRKQVIDVELPTHISASTLVELRVNPAAVVAQIRRPVPRKPGLAARKG 924 Query: 892 DDAERLFRRFRAA------GDLPYGAFGEIFWETQCQEMQQLADR--VIACRQPGQSMEI 943 + G+ P A + Q +++++ + A + + I Sbjct: 925 TAFHAWVESYFGRAGQLDLGEFPGAADDFVEDAYQLEQLRENFEASEWAAKQPSEIEVPI 984 Query: 944 DLACNGVQITGWLPQVQPD-----GLLRWRPSLL 972 + GV + G + V D L+ W+ L Sbjct: 985 ETKIAGVVVRGRIDAVFQDADGGWELVDWKTGQL 1018 >UniRef50_B9XNK2 UvrD/REP helicase n=2 Tax=Verrucomicrobiales RepID=B9XNK2_9BACT Length = 692 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 52/420 (12%), Positives = 123/420 (29%), Gaps = 55/420 (13%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 +IL L N A++ + + R C + + + R+L + Sbjct: 307 PEILNLANAAISANVKQFEKQLTPARKSGLKP---VLVPCMTASEQASFVAQRMLEL--R 361 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 + + + V+ Y A+ R +P++I+ ++ + + Sbjct: 362 EEGVNMNQMAVL------YRSHFHALELQLELTRRNIPFSITSGIRFFEQAHIKDVAAYI 415 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 L ++ E + L Q + G + + Sbjct: 416 KLVNNPR--------------------DELAFKRLVQLLPGVGGKGADKLWARFQSAFKV 455 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 ++ +L A + +S + + A + ++ Sbjct: 456 IPENLQADARDTLLPSETSTKADRNPVATALQASASAVPKKTAVAWAQFVATISQLETEP 515 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ-YGDAVPLSLL 637 + + + R ++ A + D + + I L AQ + Sbjct: 516 VRGKT----DKMIRLIVEAGY--DEHLQENYANYRNRLDDIEQLALFAQQFSTTEEFLAQ 569 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 L+ + V + T+ + + F VV ++ + DG++P + Sbjct: 570 LALLSNLEAETDEPANNDNEQVKLSTIHQAKGLEFDVVFIIMLCDGLFPSARS------- 622 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN----SERFPSVLVQELID 753 +++R L A+ A+ +LY+SY + + + PS + EL Sbjct: 623 -----LDTAEGEEEERRLLYVAITRARNELYLSYPLIRMMPGGSGDAMQQPSRFLSELPK 677 >UniRef50_C1SJ11 DNA/RNA helicase, superfamily I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ11_9BACT Length = 703 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 60/470 (12%), Positives = 140/470 (29%), Gaps = 102/470 (21%) Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL-----------------------E 346 +++LL+ L+ + V ++ +DI + + Sbjct: 228 FLHLLAGLDGNL---CVVGDDDQSIYGWRGADIRNILEFDTIFKGTKIIRLLENYRSRPQ 284 Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 A I K + D + E E + D++ L + + Sbjct: 285 ILQAANKLIRNNKLRKGKDLVAARDEGGLVQVLPVSRETDEAEFVIDQVNKYL--EEGVK 342 Query: 405 PRDIIVMVADIDSYSPFIQAV-FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 +I ++ Y Q+ F + + Y + ++ +S L L D+ Sbjct: 343 GSEIAIL------YRTNGQSRNFEVLLNRQGVAYKVIGSVGFYQRREIKDILSYLRLFDN 396 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 + S + P I + + + + + +GI Sbjct: 397 PYDSVSFRRSVKAPP----RGIGDTTINKITDYASGNGI--------------------- 431 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + + YAM + G E + +L + + Sbjct: 432 -----SILEAVYAMND------------QLRGAQKESFRGYLKIFNELAACLKVSEMVKT 474 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 + + + + E E ++ IE+ + A + ++ +++ D LA Sbjct: 475 VMDMTDY--SGYVKRYEDEQEAERRISNIEELYNA------AVSFENSNSDAMITDFLAA 526 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 S V + T+ + + F+ V L G+ +G++P Sbjct: 527 T-AIATSSDEPADSCVQLMTIHSAKGLEFESVFLTGLENGLFP------------LHGSL 573 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQEL 751 + +++R L + A+Q L+++Y + + SV + E+ Sbjct: 574 EEPDELEEERRLCYVGVTRAKQNLHMTYASTRMVYGKYMPQSRSVFLDEM 623 >UniRef50_A6GVZ8 Putative uncharacterized protein n=3 Tax=Flavobacteriales RepID=A6GVZ8_FLAPJ Length = 922 Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 92/715 (12%), Positives = 224/715 (31%), Gaps = 152/715 (21%) Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 D +I + +++ + + ++P + + +++ D + P + ++ S Sbjct: 269 SEDKNIQIIGTAKAIGQAKIVSGIINKQISDNPNASLDKVALVLGDENMLIPMLHSLPAS 328 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR---------FVSEDVLALLDVPVL 479 + I+ + +++P+ L + ++ F +DVL +L P Sbjct: 329 VGS-----LNITMGYSSKNNPIQLLIAKLFKMHNNALNRSESSYVFYYKDVLDVLSNP-- 381 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + +VN S + + I + + +++ R+ Sbjct: 382 ------------IIESYVNASKVIYTIKKN--NYTFITHQKVVSFQENPNRLF------- 420 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 L + + + E++ + +L+ + +++E + + F Sbjct: 421 -------ELLFQKWNQKPIEILELICEILLIIKSNLESISEEDKV----------VKTFL 463 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 I + +I +Y + + + L + L+G + Sbjct: 464 YS----------IYKVINKLITYCSKNEYIENIDTLHTIYKQVIDLAEVSFEGEPLSG-L 512 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD---RYLF 716 I ++ R + F+ V + +N+G +P F K + G + ++ D Y F Sbjct: 513 QIMGVLESRVLDFETVIITSLNEGKFPAGKTVNSFIPYDVKRELGLPTYKEKDAIYTYHF 572 Query: 717 LEALISAQQKLYISY-IGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 L A+ +Y+ Y D E+ S + +L + Sbjct: 573 YHLLQRAK-NIYLLYNTESDGLDGGEK--SRFITQL--------------------EVEK 609 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLE 835 H P P A+ + + Sbjct: 610 QPKHNLTHEIIQPVVPNIASKTIVIPKAKSAMIRLKEIATGKGF-------------SPS 656 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF------ILEGLSRYQINQQL----L 885 L + +P++ +FQ L + E E LE L + IN+ L L Sbjct: 657 ALTTYIRNPIQFYFQRILSIRESEEVEENIALNTLGTIIHQTLEALYKPIINKFLTTDDL 716 Query: 886 NALVEQDDAERLFRR---------FRAAGDLPYGAFGEIFWETQCQEMQQLAD----RVI 932 N ++ + E L + + L + + +E +Q+ + +++ Sbjct: 717 NKMLAVANDEVLKQFKEIYKEGEVKKGKNLLAFEVAKRNVFNFLIEEKKQIENGDVVKIL 776 Query: 933 ACRQPGQSMEIDLACN-GVQITGWLPQVQ----PDGLLRWRPSLLSVAQG-MQLW----- 981 A P + + D + ++I G + +++ ++ ++ + ++ W Sbjct: 777 ALETPLERILEDNSLPFPIKIAGNVDRIEIRNNKIRIIDYKTGKVEKNSVQLKDWNGLTL 836 Query: 982 -------LEHLVY------CASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQL 1023 ++ L Y A+G E+ + K+ + F P +Q L + Sbjct: 837 DIKNDKIIQLLCYAFMYEKQANGLEIEAGIISFKNMKGGFLPFGIKQGKEILINI 891 >UniRef50_UPI0001788A90 UvrD/REP helicase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A90 Length = 822 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 61/427 (14%), Positives = 131/427 (30%), Gaps = 78/427 (18%) Query: 333 NLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR 392 + + + ++I+ + R S L P D P +E E+L Sbjct: 326 SSIVGLGNEIIRVNERRRPKQLRSTRKSSSVPLYLRPGD----------PDQEAELLLTH 375 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 + + + RD ++ + +A+F R +P I Sbjct: 376 ITEQV-REHGKQYRDHAILYRT----ANNSRAIFEQ-LVMREIP-FIHYENG-------- 420 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 L +++ + ++ L R + + ++ I +R Sbjct: 421 ------DLFYEQWIVKPLMDHL-------RLSLDRRNFTAMEGMLHTLYINRDKGMAFIR 467 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 + + P + +L + E + + L+ Sbjct: 468 QQDAPRPKKGPLSH--------------------LLSFPGLKDFQIENIRERSKLI---- 503 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM--TLIEQQWQAIIAEGLGAQYGD 630 +GL PL+ + R + F D E + I++ + E ++GD Sbjct: 504 ---KGLKAMEPLQAVQEMRRQFYDKFLEADERQEITLHKEFIQEGLDEL--EASAKRFGD 558 Query: 631 AVPLSLLRDELAQRLDQ-ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 D L + + + A V + T+ + + F VCL+G ++G+ P Sbjct: 559 IAEFVGFVDRLIIIHKEMAAMKRDEHADAVRLMTIHKSKGLEFPSVCLIGASEGILPHTS 618 Query: 690 -----APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 +S K + +++R L A+ A+ +L IS G + Sbjct: 619 ALDAERRDDQRPLSDKEDK-ALDALEEERRLAYVAITRARDELVISSPG--FYRGRKAEV 675 Query: 745 SVLVQEL 751 S +++ Sbjct: 676 SRFFRDV 682 >UniRef50_A7VJ43 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VJ43_9CLOT Length = 1247 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 56/408 (13%), Positives = 117/408 (28%), Gaps = 84/408 (20%) Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTL-------------TPRDIIVMVADIDSYSPF 421 + E ++ D + +++ D L + RDI V++ + + Sbjct: 539 EIRSLTNVDIEARMIADEIYELVKGDKPLYIPDGDNGETRRVSYRDIAVLMRSVKKNA-- 596 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 F A A+R +P + + + +L++ D+ + A+L P+ Sbjct: 597 --KAFEEAFAERGIPLFVESESGYFDAIEISTLLDMLAVIDNSHQDYALAAVLRSPL--- 651 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 + E+ L + GI D D L R Sbjct: 652 -AGVKEQELAEI------VGI---YDRDFKDH-----------EKNLAR---------TA 681 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA---- 597 +Q V Y E +E L L L+ W ++ + +L Sbjct: 682 SFYQKVCYYAE--KPDSEASEELRQFLRMLDSW----KADKNYMSISELLHSILEQTGYY 735 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERIS-QRFL 655 +F+ ++ + + D L LD S Sbjct: 736 WFVGAMQSGKRRQANIDMLIQKADTYEDSSFRGLFNFLRYMDRLKTNDLDFAEASVLGDD 795 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMN------DGVYPRQLAPLGFDLMSQKPKRG----- 704 V + T+ + + F VV + G+ D + P + + ++ Sbjct: 796 DDSVVMMTMHKSKGLEFPVVFVSGLANRFSNLDALSPVTVNADSYLAGYAIDRKNRAKKK 855 Query: 705 -----------DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 + + ++ + AL A++KLY++ + Sbjct: 856 TFARAAMLSVMNAEKLAEEIRILYVALSRAKEKLYMTAAVKDPGAEKA 903 >UniRef50_A6LK37 Putative uncharacterized protein n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LK37_THEM4 Length = 966 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 66/571 (11%), Positives = 163/571 (28%), Gaps = 102/571 (17%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 +LE+ +K D + + E+ + ++ ++++ Sbjct: 238 RAFYQLEDIYSFLEQENFSFSGKSKGVFHIKDKT-KVFAYKNSIMEIYEVSGKIKELVKD 296 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 +P DI V+V +++ + + +P ++ + ++ + L Sbjct: 297 --GCSPSDIAVIVPNVN-----VAKQISEKLTEMGIPNNVNLQSKLSESKIVRILLQPLK 349 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + ED+LAL++ P + R E + + ++ E Sbjct: 350 TIYFNYEIEDILALIESPYINTR----ELTMDKVEKFFME-------------------- 385 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA-----ELVGHLASLLMQLNIW 574 + ++ E + + +E E + + + L Sbjct: 386 --------FKMIDDEFSKEKINEITEKIKKLEEVEDDDTYQDRMEKIEEYKTFIDILKDV 437 Query: 575 RRGLAQERP------LEEWLPVCRDMLNAF--FLPDAETEAAMTLIEQQWQAIIAEGLGA 626 L + + ++ +L ++ + F FL + ++ ++ L Sbjct: 438 FTLLDKVKEGLSGDFIKWFLEFVKNSIEDFKVFLSNEYEIMEERNALLKFVEVLNNLLSY 497 Query: 627 QYGDAVPLSLLRDELAQRLDQERIS-QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 + + E+ V+I + R + K + D Y Sbjct: 498 DLDIK-SWRTWFKIINSIIGVEKYRFLERKENAVDIFDITQARFVKKKYKFFVSFLDTYY 556 Query: 686 PRQL-APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 P PL +++S K + + R +FL + S YI+Y S P Sbjct: 557 PSFDLNPLILNVLSNPNKLMAFNEEIERRNIFLSLIFS--DTNYITYP-HSTLTGEPLLP 613 Query: 745 SVLVQE--LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 SV E +I+ + + Y+ + ++ + + Sbjct: 614 SVYANEFGIIEKVDSTFYIIPPANKVYSYIDKKLYEA--------------FNDEKSLKL 659 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 W S +H+ ++ P + + +V + Sbjct: 660 NETWQTNFSVKKLSHTLIS-----------------KYVGCPFYFYLSEKGKVK-----N 697 Query: 863 EIPDTEPFILEGLSRYQINQQLLNALVEQDD 893 + E L + + ++L E+ Sbjct: 698 FDENKE-----SLYKGILYHRVLKKYFEEKP 723 >UniRef50_C0FWK5 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FWK5_9FIRM Length = 734 Score = 87.0 bits (214), Expect = 4e-15, Method: Composition-based stats. Identities = 57/418 (13%), Positives = 124/418 (29%), Gaps = 77/418 (18%) Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 I + P +E + L R+ + L R+I + + +F Sbjct: 312 DKIQIRNMYDPFQEADYLAGRIRELHAS--GLPYREIAIFYRLQNQ-----SEIFEHVFE 364 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +P+ +S ++ + PVL+ I +L RF + + Sbjct: 365 KEGIPFEVSLKKTVKDIPVLDWLIKVL-----------------------RFSVNPKD-- 399 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 SGI D G +++ A+ + Sbjct: 400 ------KSSGIAALADKKYGD---------------------GMSVKEAEKTINILSETR 432 Query: 552 --ESSGLIAELVGHLASLLMQLNIWRRGLAQER-PLEEWLPVCRDMLNAFFLPDAETEAA 608 ++ L +E + + ++ + + A ++ L E L + N A Sbjct: 433 KTQTEILKSENAKSGSDICEKMLEFSKVYASKQVALPEDLWSYFSLENHLHPTTASYVED 492 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ-RLDQERISQRFLAGPVNICTLMPM 667 T + + +I Q S + + ++ + V + TL Sbjct: 493 RTYVMDFFTRMITYQKEQQKNVVEGFSEFLNMASLYGMNILKKEIHNENDTVKLMTLHAS 552 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F V + G+N G+ P Q ++++ LF + A++ L Sbjct: 553 KGLEFSHVFITGVNYGLIPLQTKSF--------------EEEEEEQRLFFVGITRAKEHL 598 Query: 728 YISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 +SY Q + PS ++ + + + + + + R H Sbjct: 599 ELSYYTSPGQYRAAPGPSRYLRMIPGNLVEGQEKDRESSATHLQDLKRQILAERGEHR 656 >UniRef50_D0RN21 ATP-dependent DNA helicase PcrA n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN21_9RICK Length = 742 Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 50/403 (12%), Positives = 121/403 (30%), Gaps = 91/403 (22%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E + D + L +I ++V + F F LPY I Sbjct: 329 EATGVSDIIEQNLS--KKFKLNEISILVR-----AAFQTREFEERFIKIGLPYRIIGGLK 381 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 ++ + L L + +++ P + I + ++ + Sbjct: 382 FYERSEIKDALGYLRLINQSSDDISFERIINNP----KRSIGDSSIKKIHD--------- 428 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 +A E + + + + L + + +L Sbjct: 429 ------------------------------FAREKDLSLFDASKEILKENILKPKTIQNL 458 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF-------LPDAETEAAMTLIEQQWQ 617 S L+ + W++ + + + +L+ E +A + +++ Sbjct: 459 KSFLVNMISWKQKCKDI----DHISLLEIVLDESGYSSMLKNERTPEADARLENLKELKS 514 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 ++ ++ + + L DE + +NI T+ + + F V L Sbjct: 515 SMKNYSSLNEFLENISLQTAIDE------------EWDGEKINIMTIHSAKGLEFDAVFL 562 Query: 678 LGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ 737 G +G++P Q + ++G +++R L A+ A+++L+IS+ + Sbjct: 563 PGWEEGLFPHQKSID---------EKGA-DGIEEERRLAYVAITRAKKELFISFANQRKF 612 Query: 738 DNS--------ERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 S + E+ D + E + Sbjct: 613 YGRQNDNYDFYSSLQSRFIDEIDDKYTKISIDDSTEDEFIFDQ 655 >UniRef50_C2M7M3 Putative uncharacterized protein n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M7M3_CAPGI Length = 911 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 124/933 (13%), Positives = 288/933 (30%), Gaps = 192/933 (20%) Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 F P ++ E ++A + + ++ L LL ++ + D Sbjct: 24 FITPHRRSALFLRKIFSEKVHKAAISPEFIT--LDNLLERISG----------IKKMPDL 71 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 + LFQL Y VY+ T V+ + W LWK Q Sbjct: 72 QGLFQL----------YKVYKEH------TESEVDDFEKFVGWGRMLWKD-FSDIDQYLI 114 Query: 182 PRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 + I+ +E + ++ + +L+ + LG + Sbjct: 115 AYKDIFPYME-AIKEVEHWSVGEE----------LTPMQQRHLEFWRTLGTYYN------ 157 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA 301 + K++ +Q++ + + Q VG L+ Sbjct: 158 --------------AIHKVMYQQKQGYQGFIARIAYEQIDAYRQANKEKLHLFVGFNALS 203 Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 + Y+L ++ + D + D+ L + Q + + R Sbjct: 204 V--AQEKIIQYILEEM----QADIYWDIEKHFLNN--QHSAGYFIENYLKRWKYYQRERK 255 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 + I + ++ +L +L+E P ++++D D P Sbjct: 256 PKWITEEKTLPEIKIYGTPKQVNQIHLL----TTLLDEIPEEEWEQTAIVLSDSDMLLPL 311 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL-PDSRFVSEDVLALLDVPVLA 480 +QA+ LP I+ Q PV + + L R+ +++ ALL+ P Sbjct: 312 LQAI-----DTNKLPINITMGYPLQQTPVHDLISAYFKLYISGRWYHKEIKALLEQPF-- 364 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 L ++E N ++ + +H + + ++L Y E Sbjct: 365 ------------LTNLLSE----------NYKKDTITYINEHNFSYVYKKILDLYVKEED 402 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + L+ L + ++ + +E + + + + Sbjct: 403 R------------------------ELINLLFDDEKDISVSKLIENVIKLLFFIKESLEK 438 Query: 601 PDAETEAAMTLIEQQWQAIIA-EGLGAQYGDAVPLSLLRDELAQRLDQERISQR-FLAGP 658 D E + I ++ L +Y + L L ++++S R Sbjct: 439 SDKENVLNLEYIYNFYELFNQIHYLQKKYNYIDSVKSLYYIYNDLLVKQKLSFRGEPLRG 498 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR---YL 715 + I ++ ++I FK V + MN+G++P+ A + G + ++ D Y Sbjct: 499 LQIMGVLEAQNIHFKNVLITSMNEGIFPKGNAVNSLIPFDVRANLGLPTYKESDYMYSYY 558 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 F L + + + SER S V +L+ + E +++ Sbjct: 559 FYRILQHTHRAILLYNTDTDGLRGSER--SRFVLQLLSDYRIRSQVKFPEVKIIKQNQIE 616 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLE 835 ++ + + + + Sbjct: 617 IEKDKNIIEKLVA-------------------------------IATKIDPKHRKGFSPS 645 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL----LNALVEQ 891 +L + +P+ + Q L + E EI + G ++I + L +N+++ + Sbjct: 646 SLTTYVRNPIDFYQQQILDIRDEAEVEEIVEDRSL---GTIIHRILELLYTPYVNSIISK 702 Query: 892 DDAERLFRRFRAAGDLPYGAF-------GEIFW--ETQCQEMQQLA--------DRVIAC 934 + + + ++ R ++ + + G+ + +T + + + + V+ Sbjct: 703 KNIDEIRKKVRETTEIVFKEYQQNDEISGKNIFVQQTIEEYVMKFLAIDEKNVSENVVTL 762 Query: 935 RQPGQSMEIDLACNGVQ----ITGWLPQVQPDG 963 Q ++ID+ + G + +V+ G Sbjct: 763 LSVEQKIQIDIKFDEFPFPICFNGTIDRVERRG 795 >UniRef50_A9KRX8 UvrD/REP helicase n=10 Tax=Bacteria RepID=A9KRX8_CLOPH Length = 666 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 18/144 (12%) Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMR 668 + + E Y DE L ++ + Q V + T + Sbjct: 483 EELYDILSELQEESRE--YKTHEEWLNHIDEYKDGLKEQALKQNQKDVDGVILTTFHASK 540 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F VV L+ N+G+ P + A + D+ +++R +F A+ A+ L+ Sbjct: 541 GLEFDVVILMDANEGITPHKKAVVPEDM-------------EEERRMFYVAMTRAKSFLH 587 Query: 729 ISYIGRSIQDNSERFPSVLVQELI 752 I Y+ + + N E PS V EL+ Sbjct: 588 IFYVKQ--RYNKELSPSRFVGELL 609 >UniRef50_D1JDB4 Putative ATP-dependent DNA helicase n=1 Tax=uncultured archaeon RepID=D1JDB4_9ARCH Length = 615 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 104/306 (33%), Gaps = 49/306 (16%) Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 F + L +++V + +LLD L + +T +++ + D Sbjct: 354 TFEKIAVLARNKYVFNKLESLLDENGLLFYYKMTPGTIQFESDLMK------TFDLALRV 407 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 +L P H R+ + + V+ + G+ +L+ + L + Sbjct: 408 KLN-PQDTLH-----RNRLFKMLNIAPVETTELQVVASKVNEGMERQLLEVVIRLNEDGS 461 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 ++R L + + D E + IE+ + + A+ D Sbjct: 462 NFKREL----------ESFKGDIT--IQDDNERRMVLNDIEELLKHWLN---YAKKTDNK 506 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP--RQLA 690 L R+ +A + + + T+ M+ F +V L+GM+D +P R + Sbjct: 507 SLPQFRNAMALG----QTHPLAQHNGITLSTVHTMKGQEFDIVFLMGMDDETFPDYRAIR 562 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI---QDNSERFPSVL 747 G +L ++ A A++ LYI++ + + D +R S Sbjct: 563 SGGIELT-------------QEKNNLYVAFTRAKRFLYITWPQKRLMPWGDYKDRKISRF 609 Query: 748 VQELID 753 + + Sbjct: 610 IGDFEK 615 >UniRef50_C0R270 ATP-dependent nuclease subunit B n=3 Tax=Brachyspira RepID=C0R270_BRAHW Length = 1038 Score = 86.6 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 71/528 (13%), Positives = 164/528 (31%), Gaps = 62/528 (11%) Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 + ++ I F ++E + + D ++ ++ D + P DI ++ +DI YS + + Sbjct: 235 KDINKYKDKIKFISGFGAKQETDTVIDEIIKLI--DSGVNPYDIGIIFSDIQLYSDIVSS 292 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD---SRFVSEDVLALLDVPVLAA 481 + + + P++ S+ + D + ++ +L + Sbjct: 293 ----RLKECQIKFNERRANFIWRVPIIPVLTSIFLILDKYNGEIDVDALIKILSSSYIKL 348 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 I +R L + + +++ R+ + Sbjct: 349 E-GINPYNIRDLIY-------------SYEDYNSIEIFSKMSFKDFKNRISKKFQNNDGS 394 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 L + + L ++ E+ + N +F Sbjct: 395 KSISDFLDLLNILVSKKSYKEIGLAYINILKFLNIENTEDI---EYTDNIDNNKNEYFYR 451 Query: 602 DAETEAAMTLIEQQWQAII-AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PV 659 D E A+ L I E L + L L + I + + Sbjct: 452 DNE---ALALFINLILEIAYTEKLENIQNQEISHFDFHAALNTILRDKSIGEDNDRDISL 508 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR---------- 709 + L R + K + +LG+N+ R+ P F + ++ + +R + Sbjct: 509 TVSNLYDARGLKLKHIFILGLNNDFINRR--PNAFFISAKLREEINRKNKKIIFNTQSYL 566 Query: 710 -DDDRYLFLEALISAQQ--KLYISYIGRSIQDNSERFPSVLVQEL----------IDYIG 756 D LFL L S + +Y S+ + + N E P ++ L + + Sbjct: 567 SDIHYALFLNILSSCYEDSNIYFSFRFKDEKGNLEI-PFYYIENLYRELYNEDFKFESLE 625 Query: 757 QSHYLPGDEALNCDESEARVKAHL--TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG 814 ++ + E + +++ K +L L+ + + N + Y ++ Sbjct: 626 KNGLIYRKEYIQREDNIHTDKENLMSLFLYNTIAYKIDNAENIIDTVYHKQNKNMHHDFN 685 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 + + L E V + TLQ P + F+ ++ + Sbjct: 686 NNNEDIKNFFLNILKEKVSVTTLQAIMECPAKFFYS---KLYSKESVE 730 >UniRef50_D1X726 UvrD/REP helicase n=22 Tax=Streptomyces RepID=D1X726_9ACTO Length = 1165 Score = 86.3 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 83/664 (12%), Positives = 159/664 (23%), Gaps = 123/664 (18%) Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 L R + R+ + + + E+E + D LL + + Sbjct: 346 LTRRMPLTRLPADMVRAHRDPAAVRDGGRVETYTYPTASTELENIAD-LLRRAHLEDGVP 404 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS-DRRARQSHPVLEAFISLLSLPDS 463 +++ V+V P ++ A +P + D + P + ++ L + Sbjct: 405 WQEMAVLVRAGGRSLPAVR----RALTSAGVPLEVDGDDLPLRHEPAVAPLLTALRTVAT 460 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYL---------------------------RQW 496 + LLD + Sbjct: 461 ----AALRGLLD-GDRDEADGADRDEADGAGRDEAGGADPGETGGAYQGDTAGADPGETA 515 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTW------------------RFGLTRMLLGYAME 538 + G G D +W L R+ E Sbjct: 516 GADPGETGGADPGETGGAGRAGARMSSWLDTETALTLLTSPLGSMDAADLRRLGRALRDE 575 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLA-----------SLLMQLNIWRRGLAQERPLEE- 586 + P DE L L L R L EE Sbjct: 576 ERAAGIRVPAPSDELLARALAEPERLVTHDPAYAHGAQRLGALLRKARELLEGGGTAEEA 635 Query: 587 ---------WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 W + + + ++ A+ Sbjct: 636 LWALWNGTPWPGRLERAALRGGAGGRNADRDLDAVCALFETAARAEERTGGRGALNFLEE 695 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 D D V + T + + +++V L G+ +G++P L+ Sbjct: 696 VDAQDIAADTLSRRTARP-DAVRLMTAHRSKGLEWRLVVLAGVQEGLWPDLRRRGS--LL 752 Query: 698 SQKPKRGDR--------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 GD + ++R LF A A+ +L ++ + D PS + Sbjct: 753 EADRIGGDGLAEPLTPGALLAEERRLFYVAATRARDRLVVTAVKAPADDGD--QPSRFLT 810 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 EL + A L DP + + R A Sbjct: 811 EL---------GVEPRDVTGRPRRPLAVAALVAELRATTVDPAASEALREAAAHRLARLA 861 Query: 810 ASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 A + HP R + L+ R+ +P Sbjct: 862 ALTDDEGQPLVPAA-------------------HPYRWW---GLEEPTRSAVPLRDRDQP 899 Query: 870 FILEGLSRYQINQQ-LLNALV-EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 L G + Q+ L + + A+ + G++ + E+ ++ L Sbjct: 900 VTLSGSALDQLANTCALQWFLGREVKADAPATAAQGFGNVVHVLADEVASSRTPADLDVL 959 Query: 928 ADRV 931 +R+ Sbjct: 960 MERL 963 >UniRef50_A7HBX8 UvrD/REP helicase n=7 Tax=Cystobacterineae RepID=A7HBX8_ANADF Length = 745 Score = 86.3 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 56/379 (14%), Positives = 111/379 (29%), Gaps = 74/379 (19%) Query: 382 PQREVE----VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 P REV+ + R+L + D + +I V+ ++ ++ F A R +P+ Sbjct: 354 PCREVQQQAAFVAQRVLEL--RDEGIPLPEIAVLYR---AHHHAMEIQFE--LARRGIPF 406 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD-VPVLAARFDITEEGLRYLRQW 496 + ++ ++ L + + L P + Sbjct: 407 VVRSGVRFFEAAHVKDVLAHLRFVRNPGDELALKRCLKITPGVGT--------------- 451 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 AT + W L R G G +L D +S + Sbjct: 452 ---------------------ATAEGVWNAFLARRQRG------AGTVDELLAPDVASHV 484 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 + L L R E P E V + + + +Q Sbjct: 485 PPKGRAGYRKLAELLRALSRKPTAELPGEAIEKVIEGGYEDYLRAEFLNADSRVEDLRQL 544 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 Y D L + + + + ++ + + ++ V Sbjct: 545 AEYAR-----GYEDTETFLAEISLLTELTAETVSEGGDPDEKMVLSSVHQAKGLEWRAVF 599 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI---G 733 ++ ++DG +P A DR +++R LF A A+ +LY++Y Sbjct: 600 VVWLSDGRFPSAQA------------LKDRDGEEEERRLFYVACTRAKDELYLTYPILAA 647 Query: 734 RSIQDNSERFPSVLVQELI 752 ++ S V+EL Sbjct: 648 PRDRERVVMKASRFVEELP 666 >UniRef50_C8P127 ATP-dependent DNA helicase PcrA n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P127_ERYRH Length = 715 Score = 86.3 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 49/393 (12%), Positives = 119/393 (30%), Gaps = 78/393 (19%) Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 + +R+L + D + D+ V+ S ++ R +PY I Sbjct: 331 VANRMLEL--HDEGHSYLDMAVLYR-----SNYLSRALEKVLMARRIPYVIYGGLRFYDQ 383 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 ++ +S L + L + R I E+ L + Sbjct: 384 AEIKDMMSYLRMITHGDDLA-----LRRSIAMPRRGIGEKTLDTI--------------- 423 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 R + Y Q P + + + Sbjct: 424 ---------------MLQAREREMTMYESMLYDVHHQQATP-------------KIRNYV 455 Query: 569 MQLNIWRRGLAQE--RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 M + +R + + +++ + F E + +E + I Sbjct: 456 MMIEDFREMAQEASIETIMQYVLKRSGLREHF-----EKIQELERVESLKELIGDALTFQ 510 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 + + L ++ S+ V + T+ + + F+ V ++G+ D ++P Sbjct: 511 ENYENPSLDEYIQMVSL---YGDKSEVVEGEYVRLMTVHAAKGLEFENVFIMGLADNIFP 567 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS-YIGRSIQDNSERFPS 745 + + Q+ G ++R L A+ A+++L++S IG + S Sbjct: 568 NKNSI-------QEGSGG----IQEERRLMYVAITRAKERLFLSNNIGYNFVAGGYARAS 616 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 ++E + ++ + ++ E + + + Sbjct: 617 RFIKE-MHLDEKTSEMEATPTISRSEVQDAISS 648 >UniRef50_B3DUG1 ATP-dependent DNA helicase UvrD/PcrA n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUG1_METI4 Length = 636 Score = 86.3 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 59/421 (14%), Positives = 132/421 (31%), Gaps = 90/421 (21%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSI--TFHVCHSPQREVEVLHDRLLAML 397 +IL L N A+ G +F R I +C+S + +V+ + + Sbjct: 291 PEILALANAAIEGN---QFQFPKELRAARKSLQEIKPQLLLCYSTAVQSQVIAEFIEDF- 346 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 + +++ ++ + F R +P+ I+ ++ + Sbjct: 347 -RKQGIEAKEMAILYR-----AHFHALEMQLELTRRKIPFEITSGIRFFEQAHIKDICAF 400 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL-RQWVNESGIRWGIDDDNVRELEL 516 L + + ++ + I + L L +++ SG ++ +L Sbjct: 401 LRFFINPYDETAFKRIVKM-----FNGIGPKTLSQLWAEYLASSG--------SIEKLRP 447 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 P + +W W + S G + L +L + Sbjct: 448 PKAAEKSWMS-----------------WLDIHKELSSPGYAHQPSKQLERILHGVY---- 486 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 + L + + D E + + +A+ D V Sbjct: 487 --------ADHLKMLYECYQRRL-EDIEELINFASLYNSTEDFLAQISLLTGVDTV---- 533 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + G V + T+ + + +KVV ++ + +G++P Sbjct: 534 ----------------QEQRGGVRLSTIHQAKGLEWKVVFIIMLCEGLFPS--------- 568 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDY 754 + +++R LF A A+ +L++ Y R +N S FPS ++EL + Sbjct: 569 ---NYSLNHPTLLEEERRLFYVAATRAKDRLFLCYPARRSFNNRQSTYFPSRFLEELPKH 625 Query: 755 I 755 + Sbjct: 626 L 626 >UniRef50_A9H0P3 UvrD/REP helicase n=3 Tax=Alphaproteobacteria RepID=A9H0P3_9RHOB Length = 868 Score = 86.3 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 52/400 (13%), Positives = 114/400 (28%), Gaps = 58/400 (14%) Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 +I ++V + F LPY + + ++ + S Sbjct: 447 EEIAILVR-----ASHQMRAFEDRFLTIGLPYRVIGGPRFYERMEIRDAMAYFRVVVSPD 501 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL----PATGQ 521 +++ P + + ++ + ++ +G+ L T Sbjct: 502 NDLAFERIVNTP----KRGLGDKAQQTIQVTARANGVSLFEGARLAVAQGLIKGKGGTEL 557 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 G+ R + + + V+ D G +A LA +++ + + E Sbjct: 558 RKLVEGIDRWIA--MLHQRKHVDGDVVIDDGGEGALAFSHIELAEVILDESGYTTHWQNE 615 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + E + + + + L + + Sbjct: 616 KTPEA----------------PGRLENLKELVKALENF------------ENLQGFLEHV 647 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 + +D E V+I TL + + F +V L G DG++P Q + L Sbjct: 648 SLIMDNESDDGGA---KVSIMTLHAAKGLEFPMVFLPGWEDGLFPSQRSMDESGLKG--- 701 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSH 759 +++R L + A++ IS++ + PS + EL + Sbjct: 702 -------LEEERRLAYVGITRAEEVCTISFVSNRRVFGQWQNAMPSRFIDELPQAHVEVL 754 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER 799 PG + R H + P + R Sbjct: 755 TPPGLYGGGYGAAAPRSTLHDQAAEANVYNSPGWRRLQAR 794 >UniRef50_Q2RL77 ATP-dependent helicase/nuclease subunit A n=2 Tax=Thermoanaerobacteraceae RepID=ADDA_MOOTA Length = 1405 Score = 86.3 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 66/415 (15%), Positives = 128/415 (30%), Gaps = 72/415 (17%) Query: 384 REVEVLHDRLLAMLE------------------EDPTLTPRDIIVMVADIDSYSPFIQAV 425 RE ++ R+ M+ E LT RDI++++ +P V Sbjct: 597 REALLVARRIRRMVRGTPERPGPEFQVWDQEKKEYRDLTYRDIVILLRATRDRAP----V 652 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL------ 479 F A +P + +E +SLL + D+ + A+L P++ Sbjct: 653 FLEALKQYGIPAYADLGSGYFAATEIETILSLLRVIDNPHQDIPLAAVLRSPIVGLSAGD 712 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF-----GLTRMLLG 534 AR + G + V +G + +T + G + + Sbjct: 713 LARIRLAAPGEDFFTAVVKAAGAPL-LPFTARESAAPSSTATGSGGALDNQPGQDPVCIA 771 Query: 535 YAMESAQGEWQSVLPYDE------SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 +E Q W+ P G +L L L +L WR LA+ +PL + + Sbjct: 772 PYIEDTQEPWRDDHPGPGAAAGKAVPGKDRDLASLLREFLARLERWRT-LARRQPLGDVI 830 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 +L + +A++ + L + + E Sbjct: 831 WQLYR--ETGYLEFVGGLPGGAQRQANLRALLDRARQFEGFARHGLFRFLRFIERLQQNE 888 Query: 649 RI-----SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ---- 699 + V + ++ + + F VV + G+ G + + F L + Sbjct: 889 GDLGTARALGENEDVVRVMSIHRAKGLEFPVVIVAGLGKG-FNLRDLSGDFLLHGRLGLV 947 Query: 700 ----------------KPKRGDRSRRD---DDRYLFLEALISAQQKLYISYIGRS 735 G R R + ++ + AL A++KL ++ R Sbjct: 948 PLYLDAAAGIKYPTLPYLATGHRLRLEALSEELRILYVALTRAREKLILAGTVRD 1002 >UniRef50_C7M335 UvrD/REP helicase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M335_ACIFD Length = 715 Score = 86.3 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 60/404 (14%), Positives = 116/404 (28%), Gaps = 71/404 (17%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 + + E + + L+ + P +I V+ P A ++ +P Sbjct: 320 YQATDERDEARWVAATVREFLQRG-GVDPSEIAVIFRTNAQSRPL-----EEAFSEAGIP 373 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 + + + ++ L + + + +L+VP Sbjct: 374 FRVVGGVRFYERREVRDLLAYLRVLANPDDDVALARILNVP------------------- 414 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 R GI L+ A + R +L E GL Sbjct: 415 ------RRGIGRGTEEALQAAAALRG-------RSMLSLLRAEGV----------EVLGL 451 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 + L + + L L + ++ + E +E + Sbjct: 452 TSRQERALRGFVELI----DRLGALASLHRPSELIDAVVAETSYLEHLNEEDPITLEGRL 507 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 + I A D + L + + + A V + T + + F VV Sbjct: 508 ENIAELRASAAEADDLE-----SFLERAALVSAVDEVMGASGVTLLTAHAAKGLEFDVVV 562 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 ++G+ +GV+P A D +++R LF A+ A+ L ++ R Sbjct: 563 VVGLEEGVFPHVRA------------IVDAEAVEEERRLFYVAMTRARTTLVLTSARRRA 610 Query: 737 QDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 PS + EL + + P C ES R A Sbjct: 611 SWGEPLYNPPSRFLDELPADLVATTAAPVAVGTACAESIQRASA 654 >UniRef50_Q6C4F2 YALI0E27269p n=1 Tax=Yarrowia lipolytica RepID=Q6C4F2_YARLI Length = 820 Score = 86.3 bits (212), Expect = 7e-15, Method: Composition-based stats. Identities = 60/422 (14%), Positives = 131/422 (31%), Gaps = 72/422 (17%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSI--TFHVCHSPQREVEVLHDRLLAMLEE 399 IL + ++ +++ + D ++ + +E + + + + + Sbjct: 307 ILAIAEEVISQDASRYGGCGQSRKLVGHSDFAVTPELTKYANKYKEAVGVAETIRDLRKV 366 Query: 400 DPTLTP-RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR---QSHPVLEAFI 455 P I ++ + + ++F A +++ A +SH + + Sbjct: 367 TKNRLPLSSIAILCR-TNRQA----SMFEEALVAGNTACYLAEGGANFWDKSH--IRIVL 419 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 + L S + ++ P R ++ + + Q+++ Sbjct: 420 NYLRCAYSDEDRSAFMEAMNNP----RRRLSGKTAMLISQYLD-------------DNYG 462 Query: 516 LPATGQHTWRFGLTR-MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM----- 569 P + R LL S +G Q + D LI ++ ++ Sbjct: 463 GPNSVYDLLHDAAHRKGLLNITQPSFEGLRQFMDHIDHLRDLINSKEYYMDEVIEYLLDK 522 Query: 570 -QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 L+ + + E L + + F + + + E G Sbjct: 523 VGLDEYITTMGVREKAYERLSEVGQISDRFSVITEAADNNL---------WDNEVSGDIS 573 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 PL + A R D ++ V I T+ + + + VV + + DG P + Sbjct: 574 EQLSPLGQFLNAQALRADNSGNAE----NGVIISTIHRAKGLEWPVVFVPNLLDGDLPMR 629 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 + D ++R LF AL A++ LY+SY E PS + Sbjct: 630 MPDTDID---------------EERRLFFVALTRAKRLLYMSYS-------REGEPSTFI 667 Query: 749 QE 750 E Sbjct: 668 TE 669 >UniRef50_Q30SL2 UvrD/REP helicase n=12 Tax=Epsilonproteobacteria RepID=Q30SL2_SULDN Length = 692 Score = 85.9 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 55/395 (13%), Positives = 129/395 (32%), Gaps = 54/395 (13%) Query: 385 EVEVLHDRLLAMLEEDPTL--TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI--- 439 EV +HD L L DI +++ + I +F + + + + Sbjct: 301 EVTRVHDSHPPRLLAYDELFDQYHDIAFKISNTQTPRDEIAVIFRNNSSADGIEVGLREL 360 Query: 440 ------SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT-EEGLRY 492 + ++A + +L + D++A + + A + L Sbjct: 361 GITCKRKGGTSFFDSREVKAVLDFYTLLINE---SDMMAFIHLFEFARGVGSAVAKELYL 417 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL--TRMLLGYAMESAQGEWQS---- 546 + + + +G+ + + + GL + LG + A+ ++ Sbjct: 418 ALKMLGHGSVFYGLYAPDESISNPFEKRKLNQQLGLFDDFLELGSVGKFAKCGFEDKFMR 477 Query: 547 --VLPYDESSGLIAELVGHLASLLMQLNIWRR---------GLAQERPLEEWLPVCRDML 595 +L + + + A + L L R + + E+L R +L Sbjct: 478 NPILKHPKLTKENATFLHDFYLLYRDLKGVREPRVIVAKIAKSEIYKYIAEYLSNRRALL 537 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 + + + +++ I ++ ++ E + + + Sbjct: 538 KDGTIDEKQKADSLSNIARKMV-LLEELSKPYSEH----ERFLNAMILGSSDLTQGE--- 589 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 VN+ ++ + + +K V ++ + DG +P + LM + D++R L Sbjct: 590 --GVNLLSVHASKGLEYKEVYIVDLMDGRFPNRK------LMQRGGSL------DEERRL 635 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 F A+ A+ LY+SY PS + E Sbjct: 636 FYVAVTRAKDILYLSYAKYDKIKKLNFVPSQFLYE 670 >UniRef50_D2MPE9 Putative ATP-dependent helicase PcrA n=1 Tax=Bulleidia extructa W1219 RepID=D2MPE9_9FIRM Length = 710 Score = 85.9 bits (211), Expect = 9e-15, Method: Composition-based stats. Identities = 50/372 (13%), Positives = 111/372 (29%), Gaps = 75/372 (20%) Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 T ++ V+ + ++ A D +PY I V++ +S L L Sbjct: 345 TYSEMAVLYR-----ANYLSRALEKALMDERIPYIIYGGLRFFERQVVKDALSYLRLIVV 399 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 + +L+ P + + + + + + + Sbjct: 400 GDDLS-LTRVLNRP----KRGLGLKTVEMI---------------AHRAR------ELNC 433 Query: 524 WRFGL---TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 +F L + G ++ + Q V + + L+M + +R L Sbjct: 434 SQFELLQKEELFKGKTQDTIRQFVQRVERWRSLQQKGGLELFDFFELVMDESGYRAFLEA 493 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 E+ D + + + + + A L + Sbjct: 494 EK-------------------DTDNLGHLKSLMEDIRDFSRYHPEA---------TLEEY 525 Query: 641 LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 L + V + T+ + + F V + +N+G++P S++ Sbjct: 526 LQSVALYGDKEELVENDFVQLMTVHASKGLEFDTVFVSDLNEGIFP-----------SER 574 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYI-GRSIQDNSERFPSVLVQELID-YIGQS 758 + +++R L A A++ LY++ G S + PS + E+ D YI Sbjct: 575 SLQEGYHGVEEERRLAYVAFTRARKHLYLTDAGGYSFMLQRVKTPSRFIDEIEDLYIEHR 634 Query: 759 HYLPGDEALNCD 770 + E Sbjct: 635 GVVKSQEKQESS 646 >UniRef50_Q3A3V5 DNA helicase/exodeoxyribonuclease V, subunit B n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A3V5_PELCD Length = 896 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 93/644 (14%), Positives = 186/644 (28%), Gaps = 143/644 (22%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL-P------- 436 EV + +LE I V+V D+ +Y +Q +F + L P Sbjct: 225 EVRCCARWVRHLLEGKAER----IGVVVLDMTAYQSRLQRIFREELSPGALLPGADAEKA 280 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 + +S + ++ LLSL + + + LL P + Sbjct: 281 FNLSLGTPLLNEGMVTTAFELLSLGRT-VSLDSLSYLLRSPFV----------------- 322 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 WG + L ++ + ++ L AM A+ ++ L + Sbjct: 323 -------WGHLSEQHARAVLDRELRN---LRMGQLPLKQAMVHARRGFKKKLGCCDL--- 369 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 + L ++ + AQ R W +L + + Q + Sbjct: 370 -------FSRQLEMIDSLLKD-AQPRLPGAWARHFATLLETCQWS--KDRPFNSREYQVF 419 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA----GPVNICTLMPMRSIPF 672 A G DAV + R E + L + F G V + + + F Sbjct: 420 TAWKELLAGMACLDAVSAPMKRGEALRLLRRLAADAVFQPEGSEGRVQVLGALEAAGMQF 479 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR----GDRSRRDDDRYLFLEALISAQQKLY 728 + +LG ++ V+P P F ++ + + D +R D + + L++A +L Sbjct: 480 DALWVLGAHEDVFPAPARPHPFIPVALQRRLEMPHADAARELDFAHKVAQRLLNAAPQLV 539 Query: 729 ISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP 788 +S+ D ER PS L+ +L + +R P Sbjct: 540 VSWP--EGLDGRERQPSPLIHQLPPIVP------------------------VLAESRQP 573 Query: 789 FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAF 848 A A + + P+ + L+ P RAF Sbjct: 574 --------------AALIQAVAGRLEQIADSSGPPIEAGSRISGGTGILKDQALCPFRAF 619 Query: 849 FQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL-------------------- 888 + RL S +GL R + ++L Sbjct: 620 ARHRLGARALATAS-------LGFDGLDRGSLVHRVLEWFWKDIGNWQSLTALDSAALQQ 672 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEID---- 944 + ++ A +P+ + + + L +A + +D Sbjct: 673 LLVKYIDQALEELEAERRVPFSKSQKHLESS---RLLALLGEWLAIEAKRPTFTVDTLEA 729 Query: 945 ---LACNGVQITGWLPQVQP-----DGLLRWRPSLLSVAQGMQL 980 + + + ++ ++ ++ L SV + Sbjct: 730 WHREKFGPLTLQTRIDRIDRLADGSQVIIDYKTGLASVRDWLGA 773 >UniRef50_A0QK57 Superfamily protein I DNA and RNA helicases n=3 Tax=Mycobacterium avium RepID=A0QK57_MYCA1 Length = 1096 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 109/782 (13%), Positives = 207/782 (26%), Gaps = 142/782 (18%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHV-CHSP---------------QREVEVLH 390 + N R N + S+ H C P E E + Sbjct: 349 ELRTSWRNPPRTLRVANAISAEARRRSVAVHALCPRPDAPPGTVRCALLPDMVAEREWIA 408 Query: 391 DRL--LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 D + ++P V+V +P A R +P + S Sbjct: 409 DHIDAHYRRARADGVSPPTAAVLVRRNADAAPIADA-----LRARGIPVEVVGLAGLLSV 463 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 P + +++L L + +L P R+ + L L Q G Sbjct: 464 PEVAELVAMLRLVADPTAGAAAMRVLTGP----RWRLGARDLAALWQRARALGGAGTAGG 519 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS------VLPYDESSGLIAELVG 562 E A + A + + E S L A L Sbjct: 520 PATAEAIASAADPRNVEADAVCLADAIADPGPAEGYSAAGYARIAALAAELSALRAHLDH 579 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L L+ ++ + R + L+AF A Sbjct: 580 PLGDLVAEVRRVMDLDCEVRAAAAAGWAGTEHLDAFADVVAGYAERAD------TGGTDA 633 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 A + + + + L ++ V + T+ + + +++V + ++ Sbjct: 634 SASASVAGLLAFLDVAESVENGLPAAPLAVA--RDRVQVLTVHSAKGLEWQLVAVAHLSG 691 Query: 683 GVYPRQLAPLGF--------------------------------------DLMSQKPKRG 704 GV+P A + D +S+ ++ Sbjct: 692 GVFPSTTAKTTWLTDAAELPPLLRGDRARPGALGIPVLDTSDVTNRKQLSDKISEHRRQL 751 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY---- 760 ++ R D++R L A+ A+ L +S + R PS + E+ D I S Sbjct: 752 EQRRVDEERRLLYVAVTRAEDTLLVSGHHWAATGIKPRGPSDFLCEIKDVIDASAAAGDP 811 Query: 761 --LPGDEALNCDESEARVKAHLTCLH--TRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 A + E P + + + R+ + A A Sbjct: 812 CGTVEQWAPAPADGERNPLRDNAVEAVWPADPLASRRGEVERGAALVRQAMAAEPGDPGA 871 Query: 817 ---------------HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 + P P LP + + +L P RA RL+ + Sbjct: 872 DVEGWAADVDALLVERARVTGPPPQVLPGQLSVSSLVGLARDPARA--AQRLRHRLPSRP 929 Query: 862 SEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC 921 + + +A V++ GDLP A ++ + Sbjct: 930 EP--------------HALLGNAFHAWVQKFYGAECLFEL---GDLPGAADSDVGDTAEL 972 Query: 922 QEMQQ--LADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPD-----GLLRWRPSLLSV 974 E+Q L A + ++ + G + V + ++ W+ Sbjct: 973 AELQAAFLESPWAARTPVAVEVPFEMPIGDTLVRGRIDAVFAESDGGATVVDWKTGAPPD 1032 Query: 975 AQ------GMQLWLEHLVYCASGGNGESR-----LFLRKDGEWRFPPLAAEQALHYLSQL 1023 + +QL + L + A ES ++R L L+ L Sbjct: 1033 SPEAMRQAAVQLAVYRLAWAALAKVPESSVRTAFHYVRARTTVVPEALPTSD---QLAGL 1089 Query: 1024 IE 1025 + Sbjct: 1090 LA 1091 >UniRef50_Q30TG3 UvrD/REP helicase n=8 Tax=Epsilonproteobacteria RepID=Q30TG3_SULDN Length = 682 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 46/432 (10%), Positives = 121/432 (28%), Gaps = 78/432 (18%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS---ITFHVCHSP 382 F + ++ + E + E +RS + L P IT Sbjct: 259 FDQDFIGTSVFKLEENYRSREPILKVANALIEHNRSRLGKKLIPTRGGGEDITILNSSDE 318 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 E + ++ +L D + DI V+ + + Y + Sbjct: 319 NEEARKIATKVNKLL--DSGVKAEDIAVLYR-----VNVLSRSIEDGLNRAGIAYKLVGG 371 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 ++ IS L + + +++ P + + + + + Sbjct: 372 LRFYDRAEIKDLISYLRVITNFHDDFSFKRIVNKP----KRGMGKASVDKIE-------- 419 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 L A + + + + D + + ++ Sbjct: 420 -----------LAAHANETSIFEY-----------------IEKIAITDLETLVKSKNAK 451 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDM--LNAFFLPDAETEAAMTLIEQQWQAII 620 L + + + ++ + D L + + L ++ + Sbjct: 452 TLKKFVKDIRSVANAAKE--STYNFIDILEDTFHLKDIYKGLPDEV-ERVLNMDEFYGLF 508 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 + + L +EL + +Q+++ + + ++ + + F + ++G+ Sbjct: 509 RDFIKNSPSA--SLDEFLNELTLQSEQDQV----EGDSIYMMSIHASKGLEFDHIFIIGL 562 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN- 739 +G P GD S +++R L + A+ L +S++ Sbjct: 563 EEGFLP---------------LVGDGSDLEEERRLGYVSFTRAKDTLTLSHVDSRFYKGR 607 Query: 740 -SERFPSVLVQE 750 S+ S E Sbjct: 608 RSDLQKSRFFNE 619 >UniRef50_D1ACM7 UvrD/REP helicase n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1ACM7_THECD Length = 1128 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 86/694 (12%), Positives = 162/694 (23%), Gaps = 123/694 (17%) Query: 380 HSPQREVEVLHDRLLAMLEEDP------------TLTPRDIIVMVADIDSYSPFIQAVFG 427 + E E + +R+ + DP L I V+V P Sbjct: 407 PTVTAEAEHIAERIRRLRAADPELAPDGLPWDEGPLKYSHIAVLVRRRSQIPPL-----R 461 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A +R +P + + P ++ ++ L + + LL P R+ I Sbjct: 462 KALEERDIPVEVVGLGGLLTVPEVQDVVATLRVVHDPTAGASLARLLTGP----RWRIGP 517 Query: 488 EGLRYLRQWVNESGIRWGIDDDN--VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 L L + D P + R ++ + Sbjct: 518 RDLVALGRRARRLASENTRDITPPPDASELRPEPAANAEETDPLRQVVIELTQETGSLVD 577 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 ++ + S E + L L +L R + L + + L A + Sbjct: 578 ALDDLGDPSAYSPEGLARLRRLAAELRTLRSQVGLP--LPDLVAEVERTLGLDIEVAARS 635 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVP-LSLLRDELAQRLDQE---RISQRFLAGPVNI 661 A I P L L +E + + V + Sbjct: 636 GLDPAGARADLDAFIETAASFAEESENPTLGAFLAYLKAAESEEFGLPAGRVSESDSVKL 695 Query: 662 CTLMPMRSIPFKVVCLLGM----------------------------------------- 680 T+ + + + VV + G+ Sbjct: 696 LTVHAAKGLEWPVVVVPGLCYLPSGSGRPVKGSIFPSPPQQSTRWTDNPRLLPFELRGDY 755 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 G PR DL K + DR R ++R L A+ A L + Sbjct: 756 EKGNLPRLNGLTKADLDRFKDECADRDLR-EERRLAYVAVTRASHLLIATGHRWGATA-R 813 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC--LHTRMPFDPQNY---- 794 PS ++E+ A +E A P + Sbjct: 814 PLHPSPFLEEIRQACETGAGRVVSWADPPEEGAANPLQAEAEPGRWPATPEGRRYAAIVE 873 Query: 795 -----------------------QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET 831 + R+ A A + L LP Sbjct: 874 GAEMVRDAMVGRIAPWAGDDGLTEADRRRMTAWARDVELLLAERDRGRGGDVLQVELPAK 933 Query: 832 VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ 891 + + TL P ++ + L Q+LL+ Sbjct: 934 LTVSTLVALSRDPQE--VARSIRRPMPRPPAPYARRGTAFHRWLESRWGQQRLLDPDELP 991 Query: 892 DDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQ 951 A+ GA + + ++ + R + + Sbjct: 992 GAADE-------------GAADDSMLTELQRRFEE--SEWASRRPLDIEVTFETVLGDRV 1036 Query: 952 ITGWLPQVQ-----PDGLLRWRPSLLSVAQGMQL 980 + G + V ++ W+ + + Sbjct: 1037 LRGRMDAVFTAPDGGYEVVDWKTGRPPADEDFRH 1070 >UniRef50_C8WI10 UvrD/REP helicase n=3 Tax=Bacteria RepID=C8WI10_EGGLE Length = 753 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 55/403 (13%), Positives = 118/403 (29%), Gaps = 71/403 (17%) Query: 379 CHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 SP E + LA+ + RD+ V+ + + A +P+A Sbjct: 365 AKSPDGEAAWIAQGALAL--HGEGVAYRDMAVLYR-----AHYASRPVEEALLRAEVPHA 417 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 + ++ +S L L +D L V A + ++ + +LR+ + Sbjct: 418 VYSGVPFFGRREIKDALSYLRLVA----YQDDLDFARV-ANAPKRNLGARRMAFLREKAD 472 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 E G + L R + ++ Sbjct: 473 ELG--------------------CSLFEALERFV-------DDDLFKRTKA--------- 496 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 LL ++ +R E V + L ++ + + + Q+ Sbjct: 497 ------RQLLQLVDRFRSSYEGRPVSEVLAAVLSESGYERALRTEGSQERLDNLAELKQS 550 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + + L L D +Q V + T+ + + F V L Sbjct: 551 VYEFETTCGEEVTLEHYLAHTALLTNADAMDDAQ----DKVRLMTVHAAKGLEFAHVFLC 606 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 M +GV P + + +++R L A+ A+ LY++ + Sbjct: 607 SMTEGVLPSRKTDTPQGM-------------EEERRLAFVAMTRARDGLYLTEAEGRGHE 653 Query: 739 NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 + R+PS + ++ + P + L+ + + Sbjct: 654 GAPRYPSRFLLDIDPAALEFSNKPAERELDDARAAYALADRWI 696 >UniRef50_B2IQB2 DNA-dependent ATPase I and helicase II n=4 Tax=Bacilli RepID=B2IQB2_STRPS Length = 1334 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 64/455 (14%), Positives = 153/455 (33%), Gaps = 96/455 (21%) Query: 565 ASLLMQLNIWRRGLAQER----PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 A + +L I R+ + Q P+ V + + ++ ++ + + + + ++ Sbjct: 507 AEIDQKLEIIRKKVNQSSKYLSPMYVLSDVLKSLSIDEYIMKSKEKYHLVSVLNELYKLM 566 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQ------RFLAGPVNICTLMPMRSIPFKV 674 + + + ++L L++ IS + V + T + + F Sbjct: 567 --LMECHIHPKLTVKGFLNQL-SALEEMGISLPIEDISGSPSNCVQLMTAHGSKGLEFDH 623 Query: 675 VCLLGMNDGV-----YPRQLAPLGFDL----MSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 V ++ NDG +P G ++ K + + + +++R LF A+ A++ Sbjct: 624 VFIMKCNDGKKKSEAWPGGENNSGRFSYPPSLNGKDENESQLKEEENRRLFYVAMTRAKK 683 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 L++SY S + L+ E ++I + E + Sbjct: 684 VLHLSYANDSTKT-------HLINEFEEFIDEVDVTESFEDCQSVDKV------------ 724 Query: 786 RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPV 845 K + + + L ++ + TL F P+ Sbjct: 725 --------------------------VMPKFSNNVINEIFDEL--SLSVSTLNSFLKCPL 756 Query: 846 RAFFQMRLQVNFRTED--------SEIPDTEPFILEGLSRYQINQQLLNALVEQDDA--- 894 +F L++ T + E+ + ++G ++ + + +L E Sbjct: 757 SFYFNKGLKLPSETNEAMVFGSIIHEVLEKIYISVDGSQSSELTAKTVLSLEEALKLFET 816 Query: 895 ---ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME--------I 943 E+ ++ A G+ E ++ L D V+A P Q + + Sbjct: 817 VFEEKSYQLTSNKIKKDDYARGKKIIENLYKKSGYLKDGVVAVEVPIQGIRLGDILNTTV 876 Query: 944 DL-ACNGVQITGWLPQVQPDG----LLRWRPSLLS 973 DL + ++I G + +++ DG L+ ++ Sbjct: 877 DLSEVSNIEINGKIDKIECDGNIVCLVDYKTGNFE 911 >UniRef50_B0NBE0 Putative uncharacterized protein n=9 Tax=Clostridiales RepID=B0NBE0_EUBSP Length = 615 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 56/388 (14%), Positives = 120/388 (30%), Gaps = 94/388 (24%) Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAP 430 +I P E + +R+ + + + V+ Y + A Sbjct: 310 ETIHVQEVKDPVEESRYVLERIQEY--QSQGIPYSQMAVL------YRTSLDARMLSETL 361 Query: 431 ADRYLPYAISDR-RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP-VLAARFDITEE 488 + +P+ + +R H + S L + L + + P R ++E Sbjct: 362 MEYQVPFTMKERLNNIYEHFIGTDISSYFHLAKGEQERKYFLQIANRPNRYIGRDSMSES 421 Query: 489 GL--RYLRQ-WVNESGIRWGIDDDNVRELELPATGQHTWRFGLT--RMLLGYAMESAQGE 543 + LR + +++ W + + E ++ T + R +GY Sbjct: 422 KVTYETLRNFYCDKA---WMQNRIDQLEWDMKMICNKTPYAAIQYIRKSMGY-----DEY 473 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 + Y + L+ L ++ + + ++EW Sbjct: 474 LREYAVYRQMQPE---------ELMAVLEEIQQNSKEYQSIDEWFEHVER---------- 514 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 ++ L +Q R S+ V + T Sbjct: 515 ---------------------------------YKEMLT---EQARKSRSQGGEGVALMT 538 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISA 723 + ++ + + V ++ N+G P + A D+ +++R LF A+ A Sbjct: 539 MHGVKGLEYDTVFIIQGNEGSIPYKKAKSPDDI-------------EEERRLFYVAMTRA 585 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQEL 751 ++KL ISY+ ++ PS V EL Sbjct: 586 KRKLIISYVK--EKNGKSLSPSRFVNEL 611 >UniRef50_A3EU22 Putative ATP-dependent DNA helicase, UvrD/REP family n=2 Tax=Leptospirillum sp. Group II RepID=A3EU22_9BACT Length = 746 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 56/419 (13%), Positives = 111/419 (26%), Gaps = 74/419 (17%) Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 S E + + +E RD +V+ PFI+A A+ +P+ Sbjct: 320 SEWAEARFVARTIQEKVER--GAMFRDQVVLFRMNVQAQPFIRA-----FAEAGIPFQTR 372 Query: 441 DRRA-RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 + + ++ L + + F + +L+VP Sbjct: 373 GAVQGFFNRREIRDLLAYLRVSANPFDRISLGRILNVPP--------------------- 411 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 G+ + L+ A E SG E Sbjct: 412 ----RGMGEKARERLDQQAGN-----------------PGLSSWELLERLSLELSGKARE 450 Query: 560 LVGHLASLLMQLNIWRRGLAQERPL-EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ--W 616 A+ L + + R L + WL R + E E Sbjct: 451 SARAFANDLEEASRRVRRGDGPFSLLQFWLS--RTGYEQWVSEGESGEEGPGREENLKEL 508 Query: 617 QAIIAEGLGA--QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 + + D P + +ELA ++ V++ T+ + + F Sbjct: 509 LRMSERFGDGIGELTDRTPTGVFLEELALS-QEDPGEAGESPDRVSLLTIHQAKGLEFPH 567 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V L G + + P + D+ +++R LF A+ A+ L I++ Sbjct: 568 VYLAGAEEDILPMKSR--------------DKVDVEEERRLFYVAMTRARDSLAITWCLT 613 Query: 735 SIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 PS ++++ Q + + + Sbjct: 614 RQLFGRTESPRPSRFLRDIPPEAVQGDRPVFRPETPVSRQTSELPPRKVFPPPSLAPSR 672 >UniRef50_O31626 Putative ATP-dependent DNA helicase yjcD n=3 Tax=Bacillus RepID=YJCD_BACSU Length = 759 Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 19/195 (9%) Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 + ++ + L +P+E + F + +E+ + + A+ Sbjct: 581 IKKIVPFFASLRTMKPVEA--ITFAEGKMGFSEYLKKRGNEGNKLEKGSDDLRDIKVVAK 638 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLAG--PVNICTLMPMRSIPFKVVCLLGMNDGVY 685 +P + +D R +++ V + T+ + + FK V +LG DG Sbjct: 639 KFKTIP------DFLAHVDHMRAAEKNRTDEHGVQLMTIHRSKGLEFKTVYVLGTVDGSI 692 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 P D + ++GD + +++R L A+ A+Q LY+S + S Sbjct: 693 PH-------DFSLETARKGDEAALEEERRLLYVAMTRAKQHLYLSCPAN--RRGKTANRS 743 Query: 746 VLVQELIDYIGQSHY 760 + L+ Q + Sbjct: 744 RFLYPLLQKARQPLH 758 >UniRef50_C1D2V9 Putative ATP-dependent nuclease, subunit B (AddB); putative UvrD-like DNA helicase C-terminal domain protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1D2V9_DEIDV Length = 897 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 102/717 (14%), Positives = 184/717 (25%), Gaps = 142/717 (19%) Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 + EV ++ + L D + + V+V +Y A + +P Sbjct: 256 PDIESEVRSCLRQVRSWL--DDGVRADHLAVIVRHEATYL----AALADVAREYAVPLVS 309 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 + P+ + + + +L P+L ++ + L R + Sbjct: 310 GGQLPLLHTPLGSLLQAWIDAHAREWRYSATRRVLTHPLLR----LSVDALARARAL--Q 363 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 G G+ N L TW GL Sbjct: 364 PGCPSGLGVWNADLDWLDVPEDTTWLEGL------------------------------- 392 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 G L LL+ L + D A++L+ + A Sbjct: 393 --GVLQRLLVDLG----------------------VRDQCQHDPALNVAVSLLGDRLSA- 427 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 A+ DA L + L + G V + + F V +LG Sbjct: 428 -----EARRTDACSREQLLGLVRHVLQTTTMPVLLGRGGVRVANPLAALGRRFDHVWVLG 482 Query: 680 MNDGVYPRQLAPLGFDLMSQKPK--------RGDRSRRDDDRYLFLEALISAQQKLYISY 731 ++D ++P + A + + + + + LFL A+ A +L IS Sbjct: 483 VSDTLFPARSADHPLIDSATRRRWSRSGVHVPDVSALASVEEALFLGAVAGAGHELVISR 542 Query: 732 IGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 R D E PS L + G + ++ LT Sbjct: 543 PRRGP-DGRELRPSPFWSRLGE---------GKAEAAPLALGSEMERLLTLALAGQTL-- 590 Query: 792 QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQM 851 PG Q + + HS + L A R F Q Sbjct: 591 ----PGSIQGKVQVERERDAGHFGPHSGQLDSPIRVEERRWSPSQLHAAGACRYRWFTQK 646 Query: 852 RLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR----------- 900 L+++ + + D + G + + L D E RR Sbjct: 647 LLRLDEPLDPDLVEDR---RVTGTLLHAALEAALQDRAAGDTTEDRVRRAEEALKRKERQ 703 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADR--------VIACRQPGQSMEIDLACNGVQI 952 A+G+L G + E + + V + + + + Sbjct: 704 LWASGELRGGPLWPVDREEIRRTAVRAVRSPAFVPPGWVPVHLEERREFTVRAGDATFAL 763 Query: 953 TGWLPQVQPD----GLLRWRPSLLSVAQGMQLWLEH-----LVYCASGGNGESRLFLRKD 1003 G + ++ + ++ + + L A G G L + Sbjct: 764 VGIVDRLDQTPDGLTVTDYKTGSYVSKVVFEGVMNLEVQLPLYMEALGAAGGRYLSIENA 823 Query: 1004 GEWRFPPLAAEQ--------ALHY------LSQLIEGYREGMSAPLLVLPESGGAWL 1046 A + A H L L +G AP A+ Sbjct: 824 ENLPEAAGPAAESPRKSYRWAQHQAKVSLFLENLATALAQGNVAPSPDHKREACAYC 880 >UniRef50_Q98PF5 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma pulmonis RepID=Q98PF5_MYCPU Length = 741 Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 79/211 (37%), Gaps = 16/211 (7%) Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA--FFLPDAETEAAMTLI 612 GL A+ SLL + +++ L E+ + + L F+ I Sbjct: 467 GLSAKTRKETISLLKTIVKFKKLLKNEKHEANYSWIFDAFLKEVKFYDLINYDRDDENAI 526 Query: 613 EQQWQAIIAEGLGAQYGDAVP-LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + + Q + LS +++ L RI + +++ T+ + + Sbjct: 527 QDNVYEFLTLLQKWQEENPSSELSKFFEDI--ALYSNRIDESAGNNFISLMTIHNAKGLE 584 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F V ++G+N+ + P A L S+ + +++R + AL A+ K++IS Sbjct: 585 FDYVFIIGLNENILPSAKA-----LYSKDGSIN-YDKLEEERRIAYVALTRAKTKVFISD 638 Query: 732 I-GRSIQDNSERFPSVLVQE----LIDYIGQ 757 G + S + E L D++ + Sbjct: 639 ARGIDPYSKEPKKTSRFLTEMGISLEDHVQE 669 >UniRef50_UPI000023F08A hypothetical protein FG08405.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023F08A Length = 1060 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 67/454 (14%), Positives = 142/454 (31%), Gaps = 69/454 (15%) Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE--LENRAVAGVNIEEFSRSDNKRPL 367 LL + ++ E+ + + IL+ L ++ + + Sbjct: 263 LFRLLREYPNTDEISL-EENYRSS------QSILDVSLTVIQQDTKRYKKVLLPVHTKGA 315 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT-LTPRDIIVMVADIDSYSPFIQAVF 426 P+ S+ S E E + + + L D+ +++ S I++ Sbjct: 316 RPVLRSLK-----SSSAEGEWIVSEIKRAVMMFGDMLKFEDVAILLRSAAL-SRHIESAL 369 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 G A Y + ++ I L + ++ + +++VP R I Sbjct: 370 GKAGVA----YRMIGGHKFYERKEIKVLIDYLRVVSQPDNNDALARIINVP----RRGIG 421 Query: 487 EEGLRYLRQWVNESGIR-WGIDDDN-VRELELPATGQHTWRFGLTRMLLGYAME--SAQG 542 E ++ L + +S + W + + + A + L L+ Sbjct: 422 EATVKALIEEAEQSDMSLWTLILKHCRGNRKAKANIRPKMEQKLNTELIRTITSLQKQAS 481 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER--PLEEWLPVCRDMLNAFFL 600 E P LI +L+ HL L ++R ++E++ + D + F Sbjct: 482 EISQSSPVTLV-NLIEQLLTHL-DFKKYLEEEYTEEHEQRWANVQEFVNLVSDFMKDFGA 539 Query: 601 PDAETEAAMTLIEQQ-WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP- 658 PD + + ++Q ++ L L + ++ Sbjct: 540 PDEDALPEIDNLDQVKVDDMLGRFLA----------------NVALASDAQNKGDTTEQK 583 Query: 659 --VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 V I T+ + + + VV + + G P + D++R L Sbjct: 584 SLVTISTIHAAKGLEWPVVFVPSVYTGSIPHSRSED----------------TDEERRLL 627 Query: 717 LEALISAQQKLYISYIGRSIQD-NSERFPSVLVQ 749 A+ A+ LY+S Q +S+ S V Sbjct: 628 YVAMTRAKALLYLSCPLYGSQGLSSKVELSPFVA 661 >UniRef50_A8ZYJ7 UvrD/REP helicase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYJ7_DESOH Length = 621 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 69/440 (15%), Positives = 135/440 (30%), Gaps = 98/440 (22%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIE------EFSRSDNKRPLDPLDSSITFHVC 379 F + PD+ Q IL + R+ + + +K V Sbjct: 257 FKSIFPDS-----QQMILHVNYRSTPQILAACQNLIRHNEKQIHKTLKTDNPDGEEVIVL 311 Query: 380 HSPQREVEV---LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 S E E +H+ + L+E +D+ V+ + S I+ VF +P Sbjct: 312 ESSSEETEAINLVHE--IQTLKESTDYDYQDMAVLYR-CNFQSRIIEEVFSQ----HKIP 364 Query: 437 YAISDRRARQSHPVLEAFISLLSL---PDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 Y I + ++ + L + P++ E + +L+VP I + + L Sbjct: 365 YHIENGLCFYDRREVKILLDYLRVISSPETDEGDEALAGILNVP----NRYIGRKFIGEL 420 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R + E ELP + Sbjct: 421 RSFAAEKQFH-----LYRALKELP------------------------------VTLPYI 445 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN-AFFLPDAETEAAMTLI 612 I L G L L+ + R E + + R L+ ++ + + + + Sbjct: 446 RKNIQALTGFLDPLISEAGHIR--------PAEAISLVRTSLDIDRYVSEEDMPSPDDVK 497 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 Q ++ + D A E +S V++ T+ + + F Sbjct: 498 IQNMDQLLLSAARYD-----DIRAFLDY-AAGFQNESVSDN--REGVSLMTIHKAKGLEF 549 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 VV L+GM +G+ P + +++R + A+ A LY+S+ Sbjct: 550 PVVFLVGMVEGILPTRRNEN----------------IEEERRICFVAISRAMHLLYLSHY 593 Query: 733 GRSIQDNSERFPSVLVQELI 752 + S + E++ Sbjct: 594 MTCL--GQAARTSRFLCEIL 611 >UniRef50_A8ZXL9 UvrD/REP helicase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZXL9_DESOH Length = 1132 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 51/375 (13%), Positives = 100/375 (26%), Gaps = 75/375 (20%) Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI-SDRRARQSHPVLEAFIS 456 E L D V+ VF +P + S +R + V EA S Sbjct: 820 EAPAGLGFADFAVLCRTRRQ-----TEVFADVLESAGIPCHVVSKQRIYAARGVGEAI-S 873 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 LL L + + D+ G+ +G + + Sbjct: 874 LLRLAEGQATFIDLE--------------------------KAGGVLYGATAAKKQAVIS 907 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 + R L E + GL LA + + Sbjct: 908 --------AWAKERNL-------PAAEVLAATERFPVPGLSQAAQRRLAGAARTVAELKA 952 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 P+ L + + ++ + + A + A Sbjct: 953 RTGH-LPVAGRLRFLIENMEPLATLVNGSKKN----REAFDAAVEAARPAGTDATAFFDT 1007 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 L + + V + TL + + F VV + G + + P Sbjct: 1008 ------VALAADADAVMPGVDRVRLMTLHAAKGLEFAVVFVAGCEEDLVPFSGY------ 1055 Query: 697 MSQKPKRGDRSR-RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP--SVLVQELID 753 GDR+ D++R LF A+ A+++L++++ + S V ++ Sbjct: 1056 -------GDRATDIDEERRLFYVAMTRAKERLFLTWAKNRTLYGKRKACTLSRFVADIEG 1108 Query: 754 YIGQSHYLPGDEALN 768 + + + Sbjct: 1109 DLKEQAEVETGRPPK 1123 >UniRef50_B3E1Z6 UvrD/REP helicase n=3 Tax=Geobacter RepID=B3E1Z6_GEOLS Length = 1082 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 81/543 (14%), Positives = 141/543 (25%), Gaps = 119/543 (21%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIY 312 D ++ ++ + ++ + + L +G+P A +G G D Y Sbjct: 635 DESFKQRVQQAVQHLFVDEFQDLNRSQYDLVQLLAEQATVFAIGDPDQAIYGFRGGDLRY 694 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL-- 370 F +V LL + L + AG I Sbjct: 695 FFR----------FAEVPDTVLLPLRTTYRLPRKIVQAAGSLICRNLICSGLPLSAADNC 744 Query: 371 -DSSITFHVCHSPQREVEVLHDRLLAMLE----------------EDPTLTPRDIIVMVA 413 D +I FH SP E E++ R+ ++ L+ D V+ Sbjct: 745 PDGAIEFHRALSPGAEAELIVRRIEELIGGVDSFSRSTGRSGNTPSPDNLSFADFAVLFR 804 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 +A R +PY + L LL S+++ Sbjct: 805 LGRQAEELAEA-----LTRRGIPYQLVGATPFYMESKLRPLYQLLQAASG---SDEIALW 856 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 L + A + L L + G EL A HT G Sbjct: 857 LS--LFGALKGVGTTTLDRLESELPLRG----------DFFELAAEHDHTPATG------ 898 Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD 593 L L L + + R Sbjct: 899 --------------------------------KALKLLATTLDRLQKSAADQGVAAALRI 926 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 L F L + + + + LS L Q Sbjct: 927 SLPVFGLELDDADR------------LLQMAEGFGT---DLSAFSHHLKQYASATVYD-- 969 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 A V + + + + F V+ + G+ +G++P G + +++R Sbjct: 970 PRAEAVALMSCHSSKGLEFPVIFMTGLEEGIFP-------------CTLMGTPNV-EEER 1015 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFP-SVLVQELIDYIGQSHYLPGDEALNCDES 772 LF L A+Q++ ++ G S + EL + ES Sbjct: 1016 RLFYVGLTRAKQRVILTASGYRGWMGQGLRELSRFITELPAELVDKPEAGRQRRRAPVES 1075 Query: 773 EAR 775 EA+ Sbjct: 1076 EAQ 1078 >UniRef50_D1U819 UvrD/REP helicase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U819_9DELT Length = 1042 Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 8/116 (6%) Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK--P 701 L E R A V I +L + + F+ V + +G+ P G DL++ K Sbjct: 910 SLQSELELVRRSAEKVQIMSLHAAKGLEFEAVFMPACEEGILPFA----GMDLLTAKITL 965 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYI 755 G R ++R L + A+Q LY+S R PS ++E+ + + Sbjct: 966 TPGRGQRFPEERRLMYVGMTRAKQSLYLSRAARRQLYGKTLSLPPSRYLREIPEAL 1021 >UniRef50_C0ECE2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECE2_9CLOT Length = 865 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 69/198 (34%), Gaps = 24/198 (12%) Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 G L + RR ++E PL L + + L + E + + Sbjct: 681 GRFDKLSSTIESLRRA-SEELPLSSLLDRIMEAMRMKQLCEGEEKRLRN-----LAELRE 734 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA--GPVNICTLMPMRSIPFKVVCLLG 679 + L + L R LA V I T+ + F V L G Sbjct: 735 IAREMEGLSPGRLDCILAFLETAALSSTNLDRMLALKPRVPILTVHQAKGAEFDTVFLAG 794 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 + D +P A L DL D++R F A+ A+Q+LY+S D Sbjct: 795 LQDDQFPSYFAQLSGDL-------------DEERRTFYVAMTRAKQRLYLSCAL--EVDG 839 Query: 740 SERFPSVLVQELI-DYIG 756 ++ PS ++++ +YI Sbjct: 840 RKKKPSRFLEDIPAEYIQ 857 >UniRef50_UPI00016C5306 ATP-dependent DNA helicase n=2 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5306 Length = 755 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 50/399 (12%), Positives = 117/399 (29%), Gaps = 66/399 (16%) Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + + + +P + + E E + R+ ++ T RD + + I+ Sbjct: 300 KQRKKKDLVTDNPQGEPVNVITFDNGLDEAEGVVVRIKEAVKAG-TFKYRDHAIFMR-IN 357 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + + +++ F +P+ I A ++ L L + L +++ Sbjct: 358 ALTRSLESAF----VKHGVPFQIVKGLAFFERKENRDVLAYLRLLTNPHDGVSFLRVVNA 413 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P I + L L+ +A Sbjct: 414 PA----RGIGKVSLDKLQ---------------------------------------SFA 430 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 G + + + + + L + R + Q P E V Sbjct: 431 ASQEIGLLAAAGQIAKITEIKGKAATGLRDFHRLMTDLRSKMDQP-PHELVRLVLDKSGY 489 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 L D+ E + + + A ++ ++ +++ L + A Sbjct: 490 EAMLRDSTDEEDADRLANVSELVTAAKQFWDEDNSRTITDFLEQI--TLASDTDGWDEQA 547 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 V++ TL + + F V +L + G+ P + + +++R L Sbjct: 548 DHVSVMTLHASKGLEFPAVYILAVEQGLLPH------------ERSLANDEEIEEERRLC 595 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFP--SVLVQELID 753 + A ++LY+ + + S +QEL Sbjct: 596 FVGMTRAMKELYLCHARMREFRGQLNYCIVSQFIQELPR 634 >UniRef50_B9ZQQ0 UvrD/REP helicase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZQQ0_9GAMM Length = 704 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 46/371 (12%), Positives = 113/371 (30%), Gaps = 59/371 (15%) Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 + + + D ++P+ I ++ I V A R +PY I+ Sbjct: 351 AIAQDIREAI--DSGISPKRIAILYR-----VNKIARVLEPALIARGIPYHIAQGIDVFQ 403 Query: 448 HPVLEAFISLLSLPDSR---FVSEDVLALLDVPVLAARFDITEEGLRYLRQW--VNESGI 502 P + + + L + + + L+ + E L + + +++ I Sbjct: 404 TPEAQLLMGAVRLVQNPQDSMAATKLAQLVK--------GLGERSLNDMIGYSVIHDLPI 455 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 ++ +L PA R+ + + L Sbjct: 456 ---LECRQHVKLSKPAF------AAAERL---------SQMIDGLAQWPPLYLAEWALDP 497 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 + L + + + + E +++ IE+ Q Sbjct: 498 EMGGFQDTLKELSKTADKPKTMYER--RLTTIMS---------------IEEAIQGRFGT 540 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + S + + + L + V + T+ ++ + + V + GM+D Sbjct: 541 SDQGKADAEYSRSEQWEIVQE-LALAAPDEEAEQDAVTVATVFRVKGLEYHTVHIAGMSD 599 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ--DNS 740 G+ P + + + + ++ +++R L A A+++L + + R D Sbjct: 600 GLMPMRRSSDKPPMFDEDEDEAAQNV-EEERRLSYVAATRARERLVVHHADRIHWGYDED 658 Query: 741 ERFPSVLVQEL 751 PS E+ Sbjct: 659 FFTPSGFADEM 669 >UniRef50_UPI0001C42BC3 ATP-dependent DNA helicase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42BC3 Length = 785 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 67/200 (33%), Gaps = 17/200 (8%) Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDM-LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 L +L + + ++ P+E + ++M L + + + + Sbjct: 593 LQKLPEQFKQIKKKTPVEAIAFIEQEMGLKDYLKKQGNEGNKLDRGSDDVRDL-----KV 647 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGP--VNICTLMPMRSIPFKVVCLLGMNDGV 684 + + + ++ +++ A V + T+ + + +K V +LG N+G Sbjct: 648 AARQHETIEAFIQHVDHMIAKQEEARKMPAEKTAVQLLTIHRAKGLEYKHVYILGANEGS 707 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 P D + GD +++R L A+ A+ L IS ++ Sbjct: 708 LPH-------DYALDAWREGDDKPLEEERRLMYVAMTRAKNTLAISVPT--MRRGKRAHS 758 Query: 745 SVLVQELIDYIGQSHYLPGD 764 S V+E+ Sbjct: 759 SRFVREVKKMARTQSKHKIP 778 >UniRef50_C7MP63 DNA/RNA helicase, superfamily I n=6 Tax=Coriobacteriaceae RepID=C7MP63_CRYCD Length = 841 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 51/131 (38%), Gaps = 16/131 (12%) Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L+ + +A R D + +S V + T+ + + F V + GM + ++P + Sbjct: 616 SLADFIEWVALRTDLDTMSD--DGTAVTLMTVHAAKGLEFDCVFVAGMEETIFPHMNS-- 671 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQE 750 D + +++R L A+ A+++LYI+ + S + E Sbjct: 672 ----------INDATGVEEERRLAYVAITRARKQLYITCASNRKLFGQTQANPTSRFLAE 721 Query: 751 LIDYIGQSHYL 761 + + + L Sbjct: 722 IPAELRHTSGL 732 >UniRef50_B3QF13 UvrD/REP helicase n=9 Tax=Rhizobiales RepID=B3QF13_RHOPT Length = 848 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 47/381 (12%), Positives = 115/381 (30%), Gaps = 71/381 (18%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 +T + E + + + + + L +I ++V + F F Sbjct: 396 VTVTGAWDSEEEARAIGEEIEQLQRQGHAL--NEIAILVR-----ASFQMREFEDRFVTL 448 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 LPY + + ++ L + +S +++VP + + + ++ L Sbjct: 449 GLPYRVIGGPRFYERAEIRDALAYLRVINSPADDLAFERIVNVP----KRGLGDATVQML 504 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + I +++ ++ Sbjct: 505 HDHARKRRI---------------------------------------PLFEAARMVIDT 525 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 L + L L+ W +R + +L+ + + Sbjct: 526 DELKPKARSSLRGLIENFERW----QVQRDALAHTELAEIVLDESGYTEMWQKDRSADAA 581 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + + + + L + ++ +D+E + V++ TL + + F+ Sbjct: 582 GRLENLKELVRSM--EEFENLQGFLEHISLVMDREGGADE---DAVSVMTLHSAKGLEFE 636 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK--LYISY 731 V L G +G++P Q A R+ +++R L + A+++ LY + Sbjct: 637 TVFLPGWEEGLFPHQRALDEQG----------RAGLEEERRLAHVGITRARKRAKLYFAT 686 Query: 732 IGRSIQDNSERFPSVLVQELI 752 R + PS + EL Sbjct: 687 NRRIHGTWNTTIPSRFLDELP 707 >UniRef50_C0W6Z4 Possible UvrD/REP helicase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W6Z4_9ACTO Length = 1152 Score = 83.6 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 100/781 (12%), Positives = 200/781 (25%), Gaps = 154/781 (19%) Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 P +E EV+ L L V+ DS P +A R LPY I Sbjct: 417 ADPLQEAEVVASFLADRWNPQAQL-----AVLSRTRDSLLPVAEA-----LRARSLPYEI 466 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 + P + +LL++ + + ++ LL I L L + + Sbjct: 467 VGIGGMLTIPEVADVRALLTVAANPERGDWLVRLLTAG------GIGAADLAAL--YAHA 518 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 G + PA + ++ A + +++ S+ + Sbjct: 519 RRQMRGTS-----PFQPPADKSSQGASSVAQIPD--AEPDSPMLAEAIEAVARSADRHPD 571 Query: 560 LVGHLA---------SLLMQLNIWRRGLAQER--PLEEWLPVCRDMLN-----AFFLPDA 603 + + L +L R + + PL + + + L+ A + D Sbjct: 572 GLAGVRVPGLSPAATRLADRLARQLRRVRRAMRLPLADLVTLAEQCLDLDIEVAARVDDR 631 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 + + + + + A + + + L + G V + T Sbjct: 632 IGRRGLDGLREVAEQFTRDLDSASLPSFLEWLDAAEAHERALSAPEVEPEP--GAVQLMT 689 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ------------------------ 699 + + + + V ++GMN+ +P DL + Sbjct: 690 IHASKGLEWDHVAVIGMNEKGFPLYSTQPREDLSVRSKSWMGSADEFPHPLRMDAATLPP 749 Query: 700 ------KPKRGDRSR----------------RDDDRYLFLEALISAQQKLYISYIGRSIQ 737 +P D+ ++R L AL A+ + ++ S Sbjct: 750 FTLGVLEPPEVDKDEVKDLLDQYCLALGRYGVSEERRLAYVALTRARHDVLLTGSHLSKS 809 Query: 738 DNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG 797 + R S + EL Y PG + + V L P + Sbjct: 810 STTPRPMSRFLAELRRRDLVQPYGPGWVDFDPEHGNGLVTRRARVLWPVQPGAADEAEDR 869 Query: 798 ERQSYAREWLPA------------ASQAGKAHSEFVQPLPFT--------------LPET 831 + + AR+ + Q P Sbjct: 870 DGVALARQQAAEEVAQACQDASVRLRHESEHSEGDQQAAPEAEVDGEPSTLVARWCEEAR 929 Query: 832 VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL-EGLSRYQINQQLLNALVE 890 V L ++ + P + L P+ L L L + Sbjct: 930 VLLAEREQEASAPRQLHLPAHLAATQLDALRTDPEELALHLRRPLPSRPSASARLGTVFH 989 Query: 891 QDDAERLFRRFRAAGDLPYGAFGEI------FWETQCQEMQQLADRVIACRQPGQSMEID 944 +RL G + E Q L D + +E + Sbjct: 990 DSVTQRLSPHSALFSLEEAGVPDTVSAQDRQTLERWLATAQDL-DLLQGYLLHDTEVERE 1048 Query: 945 LACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDG 1004 + +GV + + V S WL + K G Sbjct: 1049 MTISGVTLRCRIDAVFRR--------EGSGEDEPAAWL---------------IVDWKTG 1085 Query: 1005 EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTL 1064 P + LS + + + P + A++ ++ + ++ Sbjct: 1086 RHHVP-------VDQLSVYVHVWAASLGIP-AEAVRAAYAYVDYPGGKVDELSGQELLSM 1137 Query: 1065 Q 1065 + Sbjct: 1138 E 1138 >UniRef50_C1F3E1 Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F3E1_ACIC5 Length = 905 Score = 83.6 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 94/593 (15%), Positives = 173/593 (29%), Gaps = 119/593 (20%) Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA--PADRYL--- 435 S + E+E L LE +P + V+ +++ I VF P + + Sbjct: 218 SERAEIEGCAQWLRERLEANPEAR---MAVLCTQVEARRGAIDRVFRQVLKPGSQSILTP 274 Query: 436 -----PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 Y + R PV A + L L P+ A Sbjct: 275 HTEGRVYEFTLGRPLGQQPVARAALLAL-------------RWLRHPLTQADAS------ 315 Query: 491 RYLRQWVNESGIRWGIDDDNV--RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 W+ SG G ++ + + Q + L Q + Sbjct: 316 -----WLLLSGFLCGGAEERMICARADAAMREQESVAPLL----------DLQQVLAPTV 360 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 Y + +L + Q + R W + R L A P E + Sbjct: 361 RYRLPDAVRQQLQAGV-----QFADTHGFARRRRAPGAWSELARLALEAMGWPGGEEADS 415 Query: 609 MT-LIEQQWQAIIAEGLGAQY-GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + +Q+W+ ++ E +A+ L ++ + L PV + M Sbjct: 416 VQYQTQQRWEKVLEEVARLDLHEEAMSYEDFMALLERQSMDTLFAPESLDAPVQVMGPME 475 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR-SRRDDDRYL---FLEALIS 722 F V LG D +P P ++ + G ++RDDD L E ++ Sbjct: 476 AAGQEFDGVWFLGTTDAQWPAAGRPHPLLPLAVQRSAGMPHAQRDDDWQLAQHVTERILK 535 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 + ++ SY + D R S++ + + + + E+ Sbjct: 536 SAGEVICSYARHN-SDGELRLSSLMAGRGQEIVLDTVAISAAESELES------------ 582 Query: 783 LHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWA 842 Y+ S+A P ++ L+ A Sbjct: 583 -----------YEDAGLVSFADGVAPGGAEL-----------------------LKDQAA 608 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFR 902 P RAF RL+ E L+ + R + ++L +++ R+ Sbjct: 609 CPFRAFASRRLRATELRESQW-------GLDAMQRGNLLHEVLRRFWTEEEPRRIDGLEA 661 Query: 903 AAGDLPYGAFGEIFW---ETQCQEMQQLA--DRVIACRQPGQSMEIDLACNGV 950 + G GE+ E ++QLA DR + + + L Sbjct: 662 LRQTMLDGQLGEVLRVHTERVFARLRQLAGEDRWMGAYLDAEEQRLRLRLEEW 714 >UniRef50_Q6FLH1 Strain CBS138 chromosome L complete sequence n=1 Tax=Candida glabrata RepID=Q6FLH1_CANGA Length = 1088 Score = 83.6 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 65/412 (15%), Positives = 129/412 (31%), Gaps = 70/412 (16%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E + +L + + ++V I+ + + + +PY I RA Sbjct: 381 EAPSIAREILYLKSLPNLFSYDSFAILVRK----RRQIRMI-EKSLIEYRIPYQILRGRA 435 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 + A +++ + S E +++ L P + LR+ + Sbjct: 436 FWELKEIMAMLNIFRIMVSENDEEAIISSLSYP----SRGFGDTSAERLREIFAKY---- 487 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 D + L L A G+ + A G + V ++ +G EL L Sbjct: 488 -TDKTKLEILNLIAIGRVYVD------IPKSARGVVSGLCKLVEECNKENGQ--ELSVRL 538 Query: 565 ASLLMQLNI---------WRR-------GLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + + ++ + + LE +L ++F D E Sbjct: 539 VKVFDLIYEKSGLKHEFLFKDGKKKGEIDIDGDPNLENPRHKNIQLLRSYF-VDTEENQD 597 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA---------GPV 659 ++I Q+ A+ + + L+ + L + G V Sbjct: 598 DSMINQENTAL--SSINTTKSHGISLADYILQFLNSLSLFAGEKTVATTDDGNKGTLGTV 655 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR----------- 708 +CT+ + + + VV + G D P + + S + GD Sbjct: 656 TVCTIHGSKGLEWPVVFIPGCEDNNIPAIFSDDKDNT-SDNEEEGDGDNKEELTNKKSQN 714 Query: 709 ------RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV-QELID 753 D++R +F A A+ LY+S + R PS + QEL+ Sbjct: 715 NNVEESIDEERRMFFVAQTRAKYLLYLS-SVTDMDAAVPRVPSRFLTQELLK 765 >UniRef50_C7QE35 UvrD/REP helicase n=7 Tax=Actinomycetales RepID=C7QE35_CATAD Length = 787 Score = 83.6 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 52/157 (33%), Gaps = 18/157 (11%) Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA-VPLSLLRDELAQRLDQERISQRFLA 656 + + + + A+++ L EL +R D + Sbjct: 455 WTPLAPKGAGRLRDRWESLAALVSLAEEYGRTHPDAGLDRFSAELRERADAQH---APTV 511 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 V + T + + + V L+GM +G+ P A + +++R L Sbjct: 512 EGVTLSTFHAAKGLEWDAVFLVGMTEGMMPITYAET-------------PEQVEEERRLL 558 Query: 717 LEALISAQQKLYISYIGRSIQDNSE-RFPSVLVQELI 752 + A+++L++S+ R PS + L Sbjct: 559 YVGVTRARERLFLSWALARSPGGRASRSPSRFLDGLR 595 >UniRef50_D0LEA2 UvrD/REP helicase n=3 Tax=Corynebacterineae RepID=D0LEA2_GORB4 Length = 1129 Score = 83.6 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 99/668 (14%), Positives = 182/668 (27%), Gaps = 98/668 (14%) Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 + V S +E + D LL + + V+V + Sbjct: 377 PHPYPQAPAESPATGAGGVQVRVFGSSAKEATAVAD-LLRRAHLFDGVPWSRMAVIVRSV 435 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR--------FVS 467 P ++ F SA P + + A + +L + +R F Sbjct: 436 SLALPPLRRAFRSAGVPLTTP---ASGLPLHRQRAVVALMLVLRVVAARTTPAQADDFDI 492 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL-ELPATGQHTWRF 526 ED ALL P+ AA +R LR+ V S + G D L L + Sbjct: 493 EDAAALLSGPIGAA----DPGAMRRLRRGVRRSSEKRGDDGAQQDSLTALRSAILDPLLA 548 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 R L A + V+ E + G Sbjct: 549 ARYREDLTDAERAPLDRVLDVVAAAEKVHTAGRGLE---------ETLWAGWQATGLERR 599 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ-RL 645 W + E A ++ A A A + L Q ++ Sbjct: 600 WAA-------SAVRGGPGGEQADRDLDAVMAMFEAAANFADTLPAAGPAGFVHYLGQLQI 652 Query: 646 DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP-------------L 692 ++ + + V + + + VV + G+ DG++P + Sbjct: 653 PRDSRTATAASDSVTVLSAHAAVGREWDVVAVAGVLDGLWPSLRSRGSVLATGQLVDLLD 712 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS-ERFPSVLVQEL 751 G D + + D+R L L A A+++L ++ +++D S E PS + E+ Sbjct: 713 GVDPDAVDKLARPAAAIADERRLLLVACTRARRRLLVT----AVEDGSGEASPSRFIGEI 768 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT---------------RMPFDPQNYQP 796 D + S + +E MP + Sbjct: 769 ADALAGSTQDADADTPAPEELPLDPGVDRVLSLPSLVATLRSVVTAGVGEMPDERTMAAA 828 Query: 797 GERQSYAREWLPAASQAG-----KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQM 851 A +P A S+ P + + +R + Sbjct: 829 RLLARLADADVPGAHPRDWYGLAAPSSDAPLWTPDDGAVVLSPSNVDALTRCSLRWLLER 888 Query: 852 RLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRA---AGDLP 908 R D + L+ A+ + D + RA D Sbjct: 889 NGG---RDGDGTPA----------LTGSLVHTLVQAVAGELDPTEVTEALRAIWDRVDTG 935 Query: 909 YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN----------GVQITGWLPQ 958 G + E + + + R + ++LA + V++ G + + Sbjct: 936 AGWYSARELERAESMLVNFREWLRISRSDLDEVGVELAVDATIPATPDDPAVRLRGRMDR 995 Query: 959 VQPDGLLR 966 ++ DG R Sbjct: 996 LERDGAGR 1003 >UniRef50_A7NRM2 UvrD/REP helicase n=2 Tax=Roseiflexus RepID=A7NRM2_ROSCS Length = 1180 Score = 83.6 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 74/240 (30%), Gaps = 8/240 (3%) Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 E L + R A+ A + Q + E++ + + L Sbjct: 677 PEHRLDPADLNRLVDLARR--SQQALPRAARDPQIIACLSEAAQQTLARIRIIVEALEGE 734 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 + L L R L + + + Q AI + A D Sbjct: 735 GDAWQVLT--AYLFRHSRAMRARLIHAAQGHIRAQRELAALGQLL-AIARNFVRAAAPDE 791 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPV---NICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 S D + + + G V + T+ + + F +V + G+ +G +P + Sbjct: 792 CDASHFIDYIRALRAAGVRPRSSIGGQVDAVRVMTVHAAKGLEFPIVYVPGLQEGRFPVR 851 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 G L + + S ++RYL A+ A+ +L +S S L+ Sbjct: 852 GNQRGIPLPAGLIRGPIESEEQEERYLLYVAMTRARDRLVLSRSLTCGDGAKSAERSSLL 911 >UniRef50_A7Z3H2 YjcD n=3 Tax=Bacillus RepID=A7Z3H2_BACA2 Length = 761 Score = 83.6 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 50/138 (36%), Gaps = 13/138 (9%) Query: 620 IAEGLGAQYGDAVPLSLLRDE--LAQRLDQERISQRFLAG--PVNICTLMPMRSIPFKVV 675 + +G V + +D R ++ V + T+ + + F V Sbjct: 624 LEKGSDDLRDVKVAAKKFKTIPDFLAHVDHMRAAENLKTDENGVELLTIHRSKGLEFNTV 683 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 +LG DG P D + ++GD + +++R L A+ A Q LY+S Sbjct: 684 YILGAADGSIPH-------DFALETARQGDPAPLEEERRLLYVAMTRAMQHLYVSCPAY- 735 Query: 736 IQDNSERFPSVLVQELID 753 + S ++ L+ Sbjct: 736 -RRGKTARSSRFLEPLLR 752 >UniRef50_B3PNG5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PNG5_MYCA5 Length = 726 Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 131/388 (33%), Gaps = 63/388 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I F+ S + E + ++ + + + ++I ++ I SYS I+ + Sbjct: 318 IDFYCGFSEEAEARKIASKISEL--KRKRVQLKNIAILFR-ISSYSRAIEEALINENTIY 374 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 L + Q V +A L + D +L +++ P I + L Sbjct: 375 KL---FGSTKFYQREEVKDALAYLRVIHDG--SEISLLRVINKPARR----IGTSTIDKL 425 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 ++ E+ + L +++ E Q L Sbjct: 426 LKFSKENN-----------------------------LDLFKCLDTKFNEIQKNLHI--- 453 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 E + +LASL+ ++ RR + + + + F + E +E Sbjct: 454 ---QMETLKNLASLINEIRWARRIIQGNQIYLTLKEFMINNIKYFEEYKSSEEEYENRME 510 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 I A + + E+ D++ A V++ T+ + + F Sbjct: 511 NFLNLIEAIHVWETKHPHGTIDEYLQEITLITDRDVEDDA--ASYVSLMTIHNAKGLEFD 568 Query: 674 VVCLLGMNDGVYPRQLA---PLGFDLM--------SQKPKRGDRSRRDDDRYLFLEALIS 722 V ++G+++ ++P + A FD + + + +++R L A+ Sbjct: 569 YVFVVGLSEDIFPLRRAITISPKFDFTYLPFEKEEELQKQPENIEGLEEERRLAYVAMTR 628 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQE 750 A+ KL++SY N PS ++E Sbjct: 629 ARTKLFLSYAVNRRGLNK---PSRFLKE 653 >UniRef50_A7HKZ3 UvrD/REP helicase n=4 Tax=Thermotogaceae RepID=A7HKZ3_FERNB Length = 656 Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 42/351 (11%), Positives = 103/351 (29%), Gaps = 83/351 (23%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPADRYLPYAISDRR 443 E + R+ ++ D DI V+ Y ++ R +P+ + Sbjct: 349 EAYFVAQRINEIV--DEGFDYSDIAVL------YRAHAHSLELQLELTKRNIPFKVLSGL 400 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 ++ ++ L + + + + +L + + + E I Sbjct: 401 RFTETAHVKDVVAFLKILLNPYDVISWMRVLKL-------------VDNVGNVTAEKIIS 447 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 + N + L + L ++S+ E ++ + + + Sbjct: 448 RITSESNEEKSPLD-------------LFLEMKIKSSNVENLKSAIFNSIDKAPSFQIKN 494 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA--AMTLIEQQWQAIIA 621 + + + F + + E M + + Sbjct: 495 FYE------------------QFYQDILEYHYTDFRDREEDIERLIEMASYYDNVEDFLN 536 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 + L ++ + D G V + T+ + + +KVV ++G+N Sbjct: 537 DILISEDVRTNESNDFSD---------------DKGKVTLTTIHQAKGLEWKVVFVIGVN 581 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 G +P F + + D++ LF A+ A+ LYI++ Sbjct: 582 PGDFPH------FLALKD-------NTLDEEERLFYVAITRAKDILYITHS 619 >UniRef50_A6BJS6 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJS6_9FIRM Length = 717 Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 63/483 (13%), Positives = 142/483 (29%), Gaps = 103/483 (21%) Query: 308 RDYIYLLSDLESSQELDAFVDVTPD----NLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 R + L L+ E F P+ + Q+ L+NR A + N Sbjct: 236 RSQLEFLEALKGP-ETKIFAVGDPNQVIYSFRGTTQNMFFLLKNRFQAKELSLPVNYRSN 294 Query: 364 KRPLDPLDS----------------SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 L+ + I + P +E L D++ + +E RD Sbjct: 295 ASILEAANRFLQFGGKIQGSNECGEKIQIRNHYDPFQEAMYLADKIWTLHQEGKE--YRD 352 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 I V + + ++ +F ++ +PY +S +++ + PVL + +L Sbjct: 353 IAVFYR-LQKQAEILEKMFA----EQNIPYEVSVKKSWKDIPVLNWLMYVLRFATHPDDI 407 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 + + +L + R+G + ++ + Sbjct: 408 QAGMQVL---------------MDK----------RFGDKCTKKKAEDIIKNHKTEKSDI 442 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 M+L Y + + +D L L+ ++ Sbjct: 443 YKNMMLFY---TEKEVLSGEDIFDSLG------------LKEALHP---------TSADY 478 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 + +L+ + + + + Q Sbjct: 479 QQDAKQVLDFLNQICTYSREKKLNMSDGIREFLNGMALGTIESPED------------TQ 526 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 E + G V + TL + + F V ++G+N G+ P + + Sbjct: 527 ESAEKEEAGGRVKLMTLHASKGLEFDTVFIIGVNPGLLPIRCSSF--------------D 572 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 + +++R LF + A+ L +SY + S ++ + + + + + DE Sbjct: 573 QEEEERRLFFVGITRARNHLELSYYTNPGEPGVLGSYSNYLKMIPEELLEWKEIRSDEEK 632 Query: 768 NCD 770 + Sbjct: 633 RTN 635 >UniRef50_C8WGH2 ATP-dependent nuclease subunit B-like protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGH2_EGGLE Length = 968 Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 69/461 (14%), Positives = 130/461 (28%), Gaps = 48/461 (10%) Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 A + LA L + + L L A D A Sbjct: 372 RARIAADLARESEAAADALTAL-EAGDADGALAGFEARLRARTDLDPAFRAEQLAAVSCA 430 Query: 617 QAIIAEGLGAQ--YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF-- 672 + A A + A+PL + R A +L +P Sbjct: 431 RRFAAACSRANAVFDGALPLLERMPVSSSARSARDEGARPDA---LFMSLDEAAELPACS 487 Query: 673 -KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR-SRRDDDRYLFLEALISAQQKLYIS 730 + L ++ G YP +L G L+ +K G R F AL SA + + Sbjct: 488 CAALVLCDLDAGSYPVRLVEDGGTLLLEKLGLGRPADALAASRRRFFRALSSACETVVCE 547 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV--KAHLTCLHTRMP 788 + + N +PSV+ +EL+D ++ D A + A LH + Sbjct: 548 RVLNTEDANEA-YPSVMFEELLDCYREADAGEDDRATGLPKPLVAFAMLAGEDALHDNLA 606 Query: 789 FDPQNYQP---GERQSYAREWLPAASQAGKAHSEFVQPLP-------FTLPETVPLETLQ 838 + QP + + E A + + + V P + L+ Sbjct: 607 LVCEGVQPRVGKGGATLSWELSAAGAVSPEQRPRIVLPRSPREGLRGADAALALSPSALE 666 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRY----------QINQQLL--N 886 + P + F RL+++ + F L + +++ L Sbjct: 667 SYLECPYKWFALRRLRLSEPDAGFGPLEMGSFSHNVLRSFYEHFREAGHAKVDSATLPEA 726 Query: 887 ALVEQDDAERLFRRFRA-----AGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSM 941 + + +R R +P AF + + + DR + + Sbjct: 727 RALLGETFDRHLESQRNLKRSVNPLIPRTAFERAETADLRKRLVRFLDREALLLPGFEPV 786 Query: 942 EIDLACN--------GVQITGWLPQVQPDGLLRWRPSLLSV 974 + G + G + ++ +G + Sbjct: 787 RFEFDFGSSEPFPYAGCLLRGSVDRIDVNGAGQAVVIDYKG 827 >UniRef50_A7HKE8 Putative uncharacterized protein n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HKE8_FERNB Length = 1077 Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 61/468 (13%), Positives = 149/468 (31%), Gaps = 47/468 (10%) Query: 312 YLLSDLESSQELDAFVDVTP--DNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 L++L E F D+ I +I + + + ++ Sbjct: 228 QALAELVKKSENTIFFVWQKVNDSAFSQI-DEIYDFLEKNSFEFDDSFCNKKVVNLEELI 286 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + SI + E + ++ +++ + P ++ ++V + + I Sbjct: 287 KNKSIGEVDVENQYNEYHYIVKQVKSLII--EGVNPEEVGIVVPNTN-----IAYRLMDE 339 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + +PY S + +++ + L + + ED+LA+++ P++ R ++T + Sbjct: 340 FDEAGIPYRYSGKNPLTESHIIKILLQPLLTIEEGYRPEDLLAVIESPLVEKR-ELTMDE 398 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + L + IR E+ + + L R + + + + + + Sbjct: 399 IEDLFKEYEYYSIR-----MKPSEMRNKEDRRKNFFEKLERDIAELESKKEEYDIEEDVY 453 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQ---ERPLEEWLPVCR--------DMLNAF 598 L E + ++ +L + + + EW D+L + Sbjct: 454 LSSVERL--EKLKKFKEIMEELFGLLDNIHENWGSKDFFEWYKEFIKSSILKFGDILENY 511 Query: 599 ---------FLPDAETEAAMTLIEQQWQAI---IAEGLGAQYGDAVPLSLLRDELAQRLD 646 + A++ + + + ++ S L L+ Sbjct: 512 EIMSSQKSVIRSVGKEINALSKFINVLNKLEIYVQKLRESKLSKVTSWSKLFKLFVVLLN 571 Query: 647 QERISQRFLAGPVN-ICTLMPMRSIPFKVVCLLGMNDGVYPR--QLAPLGFDLMSQKPKR 703 + F + V I + + + K + D YP ++ PL + +Q+ + Sbjct: 572 SNGYRETFKSANVVDIIDIPTSKFVKKKYKFFVDFIDDYYPSIGKINPLLYRTTNQRSRI 631 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 D + +FL + S L +S PS + EL Sbjct: 632 YDLLEESERSSVFLSIIFSQNSYLIF---PKSTNTGDPLVPSKYLSEL 676 >UniRef50_A1VZC5 ATP-dependent DNA helicase, putative n=30 Tax=Epsilonproteobacteria RepID=A1VZC5_CAMJJ Length = 676 Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 130/361 (36%), Gaps = 40/361 (11%) Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 ++ +I V+ + +S + ++ A ++ + + ++AF S+L+L Sbjct: 333 GVSLEEIAVIFRN-NSSADGVEV----ALREQGIASVRKGSGSFFESLEVKAFSSMLALV 387 Query: 462 DSRFVSEDVLALLDVPVLAARFD--ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + +D++A + + + +E L + + + I+ +D D + + L Sbjct: 388 VNP---KDIMAFIHLVQYTKGVGGVLAKEIFDALLKLGHGNLIKGFLDPD--KNVNLQNH 442 Query: 520 GQHTWRFGLTRMLLGYAME-----SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 + ++ GL L A E ++ + +L + + L A + + L + Sbjct: 443 QKRNYQLGLFADLEELASETRFKFESEFDAHPILKLSKINDLCARNLEKIYLFLKKAMEI 502 Query: 575 RRGLAQERPLEE---WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 + L + E + +C + L + + + + + I + + Sbjct: 503 KHSLTLVNLICENSFYREICEE-LATKRATNKAGQVDLLRKSENLEKIETKFNVLKELAK 561 Query: 632 --VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 + + L + + VN+ ++ + + F +V ++ + G +P Q Sbjct: 562 NYSDIYKYYNFLTLGASEMSSGK-----GVNLLSVHASKGLEFDLVFVIDLAQGRFPNQK 616 Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 G +++R LF A+ A+ LY+SY + PS + Sbjct: 617 ------------LMGMGGSLEEERRLFYVAVTRAKNILYLSYAKYDKNKKTSFAPSRFLI 664 Query: 750 E 750 E Sbjct: 665 E 665 >UniRef50_UPI0001AF17D7 superfamily I DNA/RNA helicase n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=UPI0001AF17D7 Length = 921 Score = 83.2 bits (204), Expect = 6e-14, Method: Composition-based stats. Identities = 78/498 (15%), Positives = 142/498 (28%), Gaps = 99/498 (19%) Query: 398 EEDPTLTPRDIIVMVADI-DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 E L D V+ + P ++ R +PY I P ++A Sbjct: 366 SEPRGLDWSDFAVLFRSVKADAGPLVEE-----LRSRGIPYVIKGLTKLFETPEVQA--- 417 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 ++ RFV+ + +E + WV+ +G+ G+ + +VR Sbjct: 418 --AVTCFRFVA----------------GLADEQ-DVVDAWVD-AGV--GLAEGDVRA--- 452 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 G + +A +W + P+D L G L + Sbjct: 453 -----------------GLPVLTAAMQWDASKPWD-----STTLQGVFLEFLEAVE---- 486 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM-----TLIEQQWQAIIAEGLGAQYGDA 631 L +ER E + L F + E + + Y + Sbjct: 487 -LREERVPNERGELVYYNLGRFSTAIGDFERIHLTSEPQQRFDAFAKWVEHQAPDYYEE- 544 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 + + V I T+ + + + V L + +P Sbjct: 545 ---------------SDGDNGYAQPNAVVIATVHQAKGMQWPAVFLPALRKNTFPASGRG 589 Query: 692 L--GFDLMSQKPKRGD---RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 F ++ ++ G R D+R LF A+ AQ+ L +S+ + +R S Sbjct: 590 GLGVFHVVEEELIPGAARYRGTEADERRLFYVAVTRAQKYLALSFAPSDKRTGKKR--SD 647 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW 806 E H + E + + M F Y S+ Sbjct: 648 FFNE----ATGVHTVLTREVIPSPDDRLTPTPRRGTPEVVMSFSDLKYLFECPYSFKLRL 703 Query: 807 LPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRA--FFQMRLQVNFRTE---D 861 L + F + L + E + ++ A P A L + F + D Sbjct: 704 LYGFDSPLQKELGFGKSLHDVMAE-IHKRAIEGDIATPEEAEDLVDRHLNLPFANKAAAD 762 Query: 862 SEIPDTEPFILEGLSRYQ 879 P E + L R+ Sbjct: 763 QLRPAAETAVRRYLERHG 780 >UniRef50_Q3JCF0 DNA helicase/exodeoxyribonuclease V, subunit B n=2 Tax=Nitrosococcus oceani RepID=Q3JCF0_NITOC Length = 911 Score = 82.8 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 92/664 (13%), Positives = 183/664 (27%), Gaps = 127/664 (19%) Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA-PADRYLP------ 436 E+ V LE P I V+V +++ + +F + LP Sbjct: 234 EEITVAARWARHRLEHSPGEK---IGVIVPELEFLRVQVARIFDDILHPEAVLPGRGRIE 290 Query: 437 --YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 Y +S + +P++ + +L L ++ A L P + E+ Sbjct: 291 RAYNLSLAQPLADNPLVHTALLILELSKGELSMVEMGAFLRSPFV----GAAEQEFS--- 343 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + L+ R L R+ Sbjct: 344 ---------------HRALLDAYLRKTREERVSLERLW--------------KAAITARE 374 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP-----DAETEAAM 609 L L Q + L +P W L P D+E A+ Sbjct: 375 EDANHRCPALGERLQQFKVEVDSLPARQPPSGWAQSFTCWLQLLGWPGERPLDSEEYQAV 434 Query: 610 TLIEQQWQAIIA-EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + + Q+ + + + V + R L + L Q V + ++ Sbjct: 435 SAWHKSIQSFSSLDRVVPSLKKNVAIGKFRHLLVETLFQPENPIVP----VQVMGVLEAA 490 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL-----EALISA 723 F +LG++DG++P P L + + +R L E L+++ Sbjct: 491 GEQFDAAWMLGLHDGIWPTAPRPNPL-LPIELQRHYRLPHASAERELAYTRVVTERLLAS 549 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 + +S+ R + + + PS L+ EL + + L E+ + + L Sbjct: 550 APVVIVSHPRR--EGDRDLRPSPLIAELASVLPERLQLASVESYVNEIQQTGRMETLVDA 607 Query: 784 HTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAH 843 A G Q Sbjct: 608 QG------------------PPLEAGAQVGGGTGLLKAQAA------------------C 631 Query: 844 PVRAFFQMRL---QVNFRTEDSEIPDTEPFILEGL----SRYQINQQLLN---ALVEQDD 893 P RAF + RL + + E D I L + Q LL+ + Sbjct: 632 PFRAFAEYRLGAKGLEEPSVGLESLDQGILIHVALQYLWEKLQNQHTLLSCSAEELHGLI 691 Query: 894 AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEI-------DLA 946 AE + + F E F + + ++QL + + + L Sbjct: 692 AEAAKQAIATQTAVRPRIFTERFTAIEQERLEQLLLEWLERDKQRPPFAVLHQERSQPLN 751 Query: 947 CNGVQIT---GWLPQVQPDG--LLRWRPSLLSVAQGM---QLWLEHLVYCASGGNGESRL 998 G+ + + Q++ ++ ++ + + +YC + + + Sbjct: 752 LGGLSLDTRADRIDQLESGERVIVDYKTGRSNPRHWFGERPEEPQLPLYCIAHEAPLAAV 811 Query: 999 FLRK 1002 + Sbjct: 812 LFAQ 815 >UniRef50_C5DG97 KLTH0D03498p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DG97_LACTC Length = 1090 Score = 82.8 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 60/414 (14%), Positives = 115/414 (27%), Gaps = 63/414 (15%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E L +L + ++V P ++ + +PY I + RA Sbjct: 353 EARALAREILYLRSLPKLWNYNSFALLVRHRRQIRPL-----ETSLIEHRIPYKIVNGRA 407 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP----------VLAARFDITEEGLRYLR 494 + + LL S + +L L P + A F E L+ Sbjct: 408 FWELKEINGLMDLLKCVYSNYEKNAILRALQYPNRGLGPATVRKVEATFADYESPFVALK 467 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 V + L + M + + + + Sbjct: 468 NIVANPN----NGAYASKALNVITEFLSLIESCRELMAEATDLSAMTEIFDKLYEGSGLK 523 Query: 555 GLIAELVGHLASLLMQ-------------LNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 + G + + +NI R+ LA +P EE L + + Sbjct: 524 FEYLHVDGKRKAEVDPNGEPNLLNKRHINVNILRKHLANFKPFEEDLSQRQGPGDDEVDV 583 Query: 602 DAETEAAMTLI--EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 E I + I V S + ++ ++ + +R G V Sbjct: 584 KEEDTDVEGKINAHDILREFINSVNLYSTETEVEESQMSEK-----ERRQKKKREKDGFV 638 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYP----------------------RQLAPLGFDLM 697 I T+ + + + VV + G +GV P G Sbjct: 639 TISTIHGAKGLEWPVVMIPGCVEGVIPCVFGGKDDADDSDSATDGGEEGNNRGNNGTSSP 698 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQ 749 + R + D++R +F A A+ LY++ + ++ PS + Sbjct: 699 KKNRPRRNEGTLDEERRMFFVAQTRAKFLLYLTATNSNDTESRYESSTPSRFLT 752 >UniRef50_Q0EW02 DNA helicase II n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EW02_9PROT Length = 699 Score = 82.8 bits (203), Expect = 7e-14, Method: Composition-based stats. Identities = 51/378 (13%), Positives = 110/378 (29%), Gaps = 69/378 (18%) Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLP 436 VC+ E + +L A D +++ V+ Y Q+ ++ LP Sbjct: 315 VCNDEYDEARQIGTQLQAW--RDAGYAWQEMAVL------YRSNRQSLALEQILREQGLP 366 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 Y I ++ ++ +L + + ++ + + P + I +G L Sbjct: 367 YRIVGGVGFFERLEIKDALAYWALLNGCGDALQLMRICNRP----KRGIGLKGQEQLAAQ 422 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 ++ SG+R EW ++ G+ Sbjct: 423 LSGSGLR-------------------------------------AHEWLDLVAEGGVGGV 445 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 +L LA L+ L L + L++ A+ Sbjct: 446 AGKLA-PLARLIASLRPQAGTLPDRGLMALLQE--SGYLDSLQAMGELEAASR---IDNI 499 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 + + P+ + + +E V + +L + + F V Sbjct: 500 HTLQRYIELTMEQEITPIEFMDRAALLQSGEEAGRDDENEESVTLMSLHRAKGLEFDCVV 559 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 L G+ +G+ P Q A + + ++R L + A++ L ++ Sbjct: 560 LPGVEEGLLPHQRALDDGE-----------AGIAEERRLLYVGITRARRHLKLTTARVRR 608 Query: 737 QDNSER--FPSVLVQELI 752 PS ++ L Sbjct: 609 LFGETHYPLPSRFIKNLP 626 >UniRef50_B6K032 ATP-dependent DNA helicase srs2 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K032_SCHJY Length = 819 Score = 82.8 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 49/382 (12%), Positives = 113/382 (29%), Gaps = 77/382 (20%) Query: 389 LHDRLLAMLEEDPTL-TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 + + M++ P L + DI ++V S +A+ A A++ + Y + Sbjct: 348 VACEIKRMVKSCPGLFSYSDIAILVRS----SSLTRAI-EHALAEQGIAYKMVGVHKFFD 402 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID 507 + ++ + R + ++ +++VP +I + + + + E+ R Sbjct: 403 REEVRDVVAYARVVAFR-DEQALMRIINVP----SRNIGKVKVERI---LQETERRHT-- 452 Query: 508 DDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567 L L G + + + +G + Sbjct: 453 -SMWNTLCLLNNGSFSLSQRVDK-------------------------QFQRELGKFMHV 486 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL--- 624 + + + L + + + + + + +I + Sbjct: 487 INT-TEASCDSSAPFSISSMLEILLRKVKYYEYLKKKHPSTYEEKWENVMELIRQSDVLG 545 Query: 625 --GAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-----PVNICTLMPMRSIPFKVVCL 677 G + D +S R L + L I V I TL + + + VV L Sbjct: 546 EQGVLFDDEDDISENRLALHRFLANAAIVGSTDNNEETRHQVTISTLHAAKGLEWPVVFL 605 Query: 678 LGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS------- 730 + D + P + D++R L + AQ LY+S Sbjct: 606 PCLCDTILPHSRSTD----------------VDEERRLLYVGITRAQAMLYMSSFRGMQS 649 Query: 731 -YIGRSIQDNSERFPSVLVQEL 751 + S + + S + ++ Sbjct: 650 NFFSVSSSETTHMKRSRFLSDI 671 >UniRef50_C5E0S5 ZYRO0G15224p n=1 Tax=Zygosaccharomyces rouxii RepID=C5E0S5_ZYGRO Length = 1161 Score = 82.8 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 64/472 (13%), Positives = 130/472 (27%), Gaps = 96/472 (20%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 I + + + +S F S RE+ L+ P Sbjct: 326 IRQQTEGRTDRLPLRAQYDCIFAPVYLNFPAS--FLEAPSIVREM--------LYLKSLP 375 Query: 402 TL-TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 L + D ++V I+ + +A + +PY I A + I+LL Sbjct: 376 NLFSYDDFAILVRQ----RRQIKKI-ETALIEHRVPYKILKGHAFWELKETTSMINLLKC 430 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 S ++A L P I LR + I D Sbjct: 431 VYSENEKNAMIAALQYPA----RGIGPATAERLRTIIESKDIS-PFDTLKRIREGRIKFD 485 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW------ 574 ++G A S + + ++ L + +L Sbjct: 486 -----------MIGKARSSLIDFVNMIEACKKLREAPIDVA--LKEIFDKLYESSGMKQE 532 Query: 575 -------RRGLAQERPLEEWLPVCRD---MLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 ++ + +L +L +FL ++ + G Sbjct: 533 YCYFDGKKKADRKPDSEPNYLNPRHRNVLVLRDYFLGTNSGNENGGVVTDSVDNTVVSGN 592 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERI---------------SQRFLAGPVNICTLMPMRS 669 + L+ + + I Q++ G V + T+ + Sbjct: 593 NDKSDPMTNLNSVMEHFRNFFVSLTIYSNDTEESEEANAIKKQKYSEGLVTVSTIHGAKG 652 Query: 670 IPFKVVCLLGMNDGVYP---------------------------RQLAPLGFDLMSQKPK 702 + + VV + G +G+ P + P+ + ++K Sbjct: 653 LEWPVVFIPGCEEGIIPSLFGDGRSSNLEGDDDEDSENESDEEQKSEKPVTDNNSTKKKT 712 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS-ERFPSVLV-QELI 752 +++R +F A A+ LY+S + +D PS + +EL+ Sbjct: 713 VVPDDSLNEERRMFFVAQTRAKHLLYLS--SVTDRDGRVPAVPSRFLTKELL 762 >UniRef50_UPI000050F878 superfamily I DNA/RNA helicase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F878 Length = 679 Score = 82.8 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 67/207 (32%), Gaps = 22/207 (10%) Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 +PY G + ++ L R + E V + + Sbjct: 375 IPYVLRGGERYFARKEVKEAILMLKAARATSSGRPLPEVVAEVLISL---GYSTKPPAAG 431 Query: 608 AMTLIEQQWQAIIA--EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLM 665 A + +A++ E L A VPL +L+ R + + V + + Sbjct: 432 ASRQKWESLKALVDLAETLQAGSELPVPLETFLADLSDRAEHQ---FAPDIEGVTLASFH 488 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + + V L+G+++G+ P A ++R LF AL A Sbjct: 489 SAKGLEWDSVHLVGLSEGLLPISYAQT-------------PRAIAEERRLFYVALTRAGT 535 Query: 726 KLYISYIGRSIQDNS-ERFPSVLVQEL 751 L +S+ R PS + EL Sbjct: 536 DLSMSWSLSRHDSKQRPRKPSRFLSEL 562 >UniRef50_C6LEN7 ATP-dependent helicase PcrA n=2 Tax=Clostridiales RepID=C6LEN7_9FIRM Length = 604 Score = 82.8 bits (203), Expect = 8e-14, Method: Composition-based stats. Identities = 46/362 (12%), Positives = 104/362 (28%), Gaps = 87/362 (24%) Query: 393 LLAMLEED--PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA-RQSHP 449 ++ + + D V+ V + +P+ + D H Sbjct: 323 IIQRIRQGLAQGRRYEDFAVLYRSNTD-----AGVLSQKLLEYNVPFKMRDTLPNLFEHW 377 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 + I+ L L + +VL +++ P ++++ S Sbjct: 378 ISRQVIAYLKLAHGDYSCANVLKIINRP----------------KRYIERSC-------- 413 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 T + R+ + Y W + + Sbjct: 414 -----------LDTQQVDFERLRMYY----EDKYW-------------------VIRRID 439 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDML--NAFFLPDAETEAA-MTLIEQQWQAIIAEGLGA 626 +L LA+ +P + R + + AE + + + Sbjct: 440 KLEQDLAALARMQPYAA-VQYIRHGIGYEQYLEEYAEYRKIKAEDLYEVLDRLAQSAK-- 496 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 Y +E ++ L ++ + V + TL + + F V L+ +N+G+ P Sbjct: 497 GYETCEAWFAYMEEYSEMLKEQAKNGAQKQDCVTLTTLHSAKGLEFPFVFLIDVNEGIIP 556 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 + A L D+ +++R +F + A ++L I + PS Sbjct: 557 YKKALLASDV-------------EEERRMFYVGITRASEQLTI--CVLKEKYGKSLKPSP 601 Query: 747 LV 748 + Sbjct: 602 FL 603 >UniRef50_A6VFA5 UvrD/REP helicase n=2 Tax=Methanococcus maripaludis RepID=A6VFA5_METM7 Length = 946 Score = 82.4 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 55/390 (14%), Positives = 117/390 (30%), Gaps = 58/390 (14%) Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 V SP+ E + + + ++ + + DI V+ + +++ + +R + Sbjct: 338 LIVSESPEEESIKIAEWIEKLITKH-NVDYGDIAVLFKSVRNHANELV----DELMERNI 392 Query: 436 PYAISDRRARQSHPVLEAFISLL------SLPDSRFVSEDVLALLDVPVL-AARFDITEE 488 PY + + P + + I + L + + +++LLD +L + ++ E+ Sbjct: 393 PYVVYGDSSLIDQPEIRSVIHAMACINEYELNEKVSRNRKLMSLLDYDILGSDLLNLDEK 452 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + L D + G A + Sbjct: 453 TVEKL-------------DYRGEPHKFCDVYNYEGLKNQ------GIATKDIDTLINIKN 493 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 ++ + L+ RR + + +AE Sbjct: 494 IRNKDVKK--PQLDIFYELMDATGYLRRLFEASK-------------DEADKYNAEKAEL 538 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP--VNICTLMP 666 ++ I+ + + L + D + G V I T+ Sbjct: 539 QLKNLAKFTTILEKFKKNTGSN--SFKSFIYLLTKIPDNKLEDAASPEGQDVVKIMTIHQ 596 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD--RYLFLEALISAQ 724 + + F VV L G+ + Y A + ++ D+ R +F + AQ Sbjct: 597 AKGLEFPVVVLGGVTERRY-GARADDRLVNIPKQFMMNKHDVDFDEEVRRVFYVGMSRAQ 655 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDY 754 + L IS D R S + E+ DY Sbjct: 656 KLLTIS-----AIDGRNRKMSKFIGEIGDY 680 >UniRef50_B5CL82 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B5CL82_9FIRM Length = 758 Score = 82.4 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 98/659 (14%), Positives = 211/659 (32%), Gaps = 135/659 (20%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA---------SW 303 D ++ LL +++ + + Q+ + + L A SW Sbjct: 198 DLLRVSTLLLKEQDAFIPKWIIVDEVQDSDKMQMEFLEALKGRETKLFAVGDPNQVIYSW 257 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 G + +LL ++E V+ + L+ + L+ ++ A E Sbjct: 258 RGTGENMFFLLKHRFEAKEYSLPVNYRSNALILGAANHFLQFGSQIRASREKGEK----- 312 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 I + P +E E L R+ + ++ LT R++ V + + Sbjct: 313 ----------IKIVNYYDPFQEAEELELRIREL--KEQGLTYREMAVFYR-LQRQVDVLA 359 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 VF + +PY +S +++ PVL F+ +L + Sbjct: 360 KVFER----QGIPYEVSVKKSLHDIPVLNWFVRVLRFCVNPLD----------------- 398 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 +SGI D + FG+TR + + Sbjct: 399 --------------EQSGIAAVADKEFG-------------EFGMTRKKA--EKIIKEKK 429 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL---PVCRDMLNAFFL 600 L Y++ +G A ++ + + +E+ + E+ R + ++ Sbjct: 430 LSESLLYEQMTGFQA-------WVVDNFGKFMKEGEKEQKIFEYFHLKEFLRPTVESYTE 482 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 + ++ + + +I G ++ ++ L L+ E ++ ++ V Sbjct: 483 NVKKIKSFLKQLCSYCGSIDFRGHLREFLNSSELYGLKMEAGEKEVGAEMNPEDRKDAVQ 542 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + TL + + F V L+G+N G+ P + +++R LF + Sbjct: 543 LMTLHASKGLEFDTVFLIGVNPGLIPLHSKNY--------------EQEEEERRLFFVGI 588 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLV----QELID----------YIGQSHYLPGDEA 766 A+ +L +S+ + S + QEL++ + Q ++A Sbjct: 589 TRAKNRLELSWYTNPGEPGIAGEESRYLKMIPQELLEGMPDEKERWANLQQLKKEVQEKA 648 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP-LP 825 + +A+ KA + Q ++ +E Q K + Q + Sbjct: 649 QEKVQEKAQEKAQEKVQEKAQEKVQEKAQKEVQEKEQKELRTELRQEVKLEDQQEQADMR 708 Query: 826 FTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL 884 + V + HP + + V R+ED + + E Y + Q L Sbjct: 709 AGIQAVVQV-------RHP-----KYGVGV-LRSEDDLMVEAE------FDGYGVKQFL 748 >UniRef50_UPI000196B4E1 hypothetical protein CATMIT_00993 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4E1 Length = 853 Score = 82.4 bits (202), Expect = 9e-14, Method: Composition-based stats. Identities = 61/386 (15%), Positives = 130/386 (33%), Gaps = 51/386 (13%) Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 L+ + + ++I Q D + D Q + + Sbjct: 301 SRSLSECIGHTFKEIIQFLQKQDISASMIKTLDAYQCDDEISPKEF-DLFLQCI--IPGN 357 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 + V + +L + K + L G+N+ P +++ GF LM + K+ + Sbjct: 358 RVTNKTGVIVTSLEKGLTASPKHIYLTGINETFLPLEISDKGF-LMEEDYKQFNPHPLLL 416 Query: 712 DRYL------FLEALISAQQKLYISYIGRSIQDN---SERFPSVLVQELIDYIGQSHYLP 762 D L ++ L++ Y+SY + N +E PS+L+ L D + P Sbjct: 417 DEQLQAHYKRIIQVLLNP----YLSYTFSYSKKNMAANELIPSILMSRLSDLFELEYINP 472 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNY--QPGERQSYAREWLPAASQAGKAHSEF 820 S +K +L +R+ DP N + S E++ ++ G+ Sbjct: 473 ---------SLNLIKNNLYLNQSRIDEDPINRLIDHYKMTSNQPEFIKDTNKLGRG---- 519 Query: 821 VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQI 880 V + L+ + P + + L++ + ED+ L L Y + Sbjct: 520 -----------VSVSRLETYNKCPFSYYIKYGLKITEKREDTLQSS----ELGSLCHY-L 563 Query: 881 NQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQS 940 ++ L+ D + + + F + ++M+ + Q G Sbjct: 564 MEKCLDDESLVDQEAKHYIEENLKEKYDDHPMNQYFIDNLIKDMKMTIKIIQKQLQLGGY 623 Query: 941 MEIDLACNGVQITGWLPQVQPDGLLR 966 + + +I+G + V G++ Sbjct: 624 VPVS---KEKEISGQIGDVPFSGIID 646 >UniRef50_C8XJ56 UvrD/REP helicase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XJ56_NAKMY Length = 1099 Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 113/676 (16%), Positives = 198/676 (29%), Gaps = 96/676 (14%) Query: 336 HNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA 395 H ++ +L R VA + D +P + + + E L D L Sbjct: 338 HRLRPAVLT-ATRRVAAALPGGWPHRDLTSAGEPRPAEVVVRTFSTAASEAAFLADELRR 396 Query: 396 MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 L + V+V + P ++ A A +P A PV+ + + Sbjct: 397 AHLRG-GLAWSRMAVLVRSPAADLPVVR----RALAVAGVPCATGLVDPGSDDPVVRSIL 451 Query: 456 SLLSLPDS--RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 LL R E + L+ P +G+D D VR Sbjct: 452 RLLDCALEPARLTGERAIDLMTAPG-------------------------FGMDTDAVRR 486 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 L H G T L+ A+ A LP D L A ++ +LL + Sbjct: 487 LRRRLRVAHPANSGPTADLVAAALLGAP------LPEDLPEDLSAPVIAA-RTLLESVRS 539 Query: 574 WRRGLAQERPL-EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG-DA 631 PL W + + A++ A Sbjct: 540 VAEDPDPRVPLWRAWQGLGLADALLAASLRGGRAGFRAD--RSLDAVLGLFDAAGELVAR 597 Query: 632 VPLSLLRDELAQRLD--------QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 +P + +R LA+ D R V + + + + + +VCL G+++G Sbjct: 598 LPYAGVRAFLAEVSDRRIGLDPAGARGPGGPGGHGVALLSAHSAKGLEWDMVCLAGVSEG 657 Query: 684 VYP---RQLAPLGFDLMSQKPK---------RGDRSRRDDDRYLFLEALISAQQKLYISY 731 +P R+ + LG D + G +++R LF A + +L + Sbjct: 658 RWPVLRRRQSLLGLDELLDAEDGVASGNIDGPGGGDALNEERRLFYVAATRTRGRLVATS 717 Query: 732 IGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 + + + PS + EL H P + L R DP Sbjct: 718 VA-----DQDTVPSRFLTELAGPAELPHGWPEQPDGSRRRRLQ--LTDLVADLRRAVTDP 770 Query: 792 QNYQPGERQSYAREWLPAASQAGKAHSEF----------VQPLPFTLPETVPLETLQRFW 841 +P + + AA+ AH P+ P T+ T++ Sbjct: 771 TTPEPTATAAARQLARLAAAGVDGAHPRDWFGLAGLSTSAAPVADGAPVTLSPSTVEALT 830 Query: 842 AHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRF 901 P+RA + R T +I G+ + + L + D + R Sbjct: 831 RCPLRAVLERR-GARSGTSQQQIE--------GIVMHALVDGLARGVPRADLVAEMERFL 881 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQP 961 +LP + ++ + + +A Q++ WLPQ Sbjct: 882 AGRTNLPP-----WLIARTRRALELMLTAAQTWMAELPADRRPVATEA-QLSTWLPQSDE 935 Query: 962 DGLLRWRPSLLSVAQG 977 G R + Sbjct: 936 AGRGRPVKVNGRADRI 951 >UniRef50_A5DZQ5 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DZQ5_LODEL Length = 939 Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 71/519 (13%), Positives = 154/519 (29%), Gaps = 72/519 (13%) Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL--LAMLE 398 DIL+ R + +++ P + +E + ++ L L Sbjct: 340 DILDFSERVMTQQPDRILKNLNSQCPHSFKPVYLNLSSAA---QEASWIAYQIDFLQQLP 396 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 +P + +I ++V +Y +A+ + + +PY + +A + A + L Sbjct: 397 HNP-IKYDEISILVR--AAYQT--RAI-EAELVRKRIPYIMVRGKAFWERKEVTAIMDYL 450 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFD-ITEEGLRY-LRQWVNESGIRWGIDDDNVRELEL 516 + +L L+ P F +T E + + + S + Sbjct: 451 RVCGEPNDRIAILQTLNYP--KRGFGAVTLEAIDRAITTAITSSNATSINTSTTTTTVVD 508 Query: 517 PATGQH---TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG-----LIAELVGHLASLL 568 + T + + +SA+ + +L + G E + ++ Sbjct: 509 DLNNVNNTITVKDANNTFINKRTKKSARDVLRGLLESNNQYGVKLPLKAKESLKGYIKMI 568 Query: 569 MQLNIWRRGLAQERPLE--EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG- 625 Q + L +E ++ + + + L + + + + Sbjct: 569 DQAQVMLDNLEKEEQIDPLKVARLFDQIYTDSGLKKEYESEEKEEVRLNVEEVKTQFCEF 628 Query: 626 ----AQYGDAVPLSLLR---------------DELAQRLDQERISQRFLAG--------- 657 + + V L + D + + S Sbjct: 629 TPQSDLFMEEVTLDEIEESNNGKTDLINSTNDDLGENFIRKFVESVGLYEDDKTGDEKKK 688 Query: 658 ---PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 V I T+ + + + VV + G+++G+ P GF L + D + +++R Sbjct: 689 KKVGVAISTIHGSKGLEWPVVFVPGLSEGLLPA-----GFALTTD-----DPNSLNEERR 738 Query: 715 LFLEALISAQQKLYI-SYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 F A A+ L+I SYI + +S R P V + I + + Sbjct: 739 CFYVASTRAKTLLFISSYIEKEYSGSSWRKPIDTVSRFLKAIDERGSFVKSLQFLAKDGN 798 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGERQS-YAREWLPAAS 811 L L + + S Y WL Sbjct: 799 ---LEALYTLLGKELVIQSQFDKEAMFSAYKLNWLKQHE 834 >UniRef50_A7HA18 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID=A7HA18_ANADF Length = 1196 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 98/690 (14%), Positives = 184/690 (26%), Gaps = 137/690 (19%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTL----------------TPRDIIVMVADIDSYSP 420 + +RE + R+ A++ + D+ ++ + Sbjct: 503 NAAERRRREAGAIARRIRAVVSGAAGVAVRERGEGGAERVRRPRLSDVAILFRRLTQIGE 562 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 + A +PY ++ P + LL+ + A+L P+ Sbjct: 563 Y-----ERALRAAGIPYRLARGGGFYQAPEVRDLGELLATLADPSDAIGWAAVLRSPMC- 616 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM--- 537 +++ L L R G+ R+ A Sbjct: 617 ---GVSDATLFLL--------ARAGLARLARVSP--------------ERLAAEVARALG 651 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ---LNIWRRGLAQERPLEEWLPVCRDM 594 E G + + AE L LL L+ R LA + L + Sbjct: 652 EGGAGALAPEAAERAVASVPAEDWARLTRLLDAWRELHALRDRLAPDALLTRAVERLD-- 709 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 L+A L + E + + +A G+ G A L+ A R +E ++ Sbjct: 710 LDAVLLAGPDGERRAVNVAKAIA--LAARFGSDGGTAAELARHLRAQASRPPREPEAEVE 767 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 V + T+ + + + VV + + G PR A L ++ R DR+ Sbjct: 768 AGDAVALLTVHQAKGLEWPVVFVPDL--GARPRSDARRAL-LDAEGRLCAMRYDPAADRF 824 Query: 715 -----------------------LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 L A+ A+ +L +S Sbjct: 825 EETASVRDARAHERRAAAAESRRLLYVAMTRARDRLVLS--------------------- 863 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 + A + L R+ + P + PA + Sbjct: 864 --------GEASNGAESWRGLVEVAAEARAELVRRIALEEAGSAPACGPPVDGDDAPAPA 915 Query: 812 QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI 871 + + P V + L + P R L + P +P Sbjct: 916 EPPAVAPPRLAGAPRVAAVRVAVTELAEYARCPRRHLLGRVLGLPEPHGARGAPADDP-- 973 Query: 872 LEGLSRYQINQQLL-NALVEQDDAE---RLFRRFRAAGDLPYGA-----FGEIFWETQCQ 922 +R + +L A + E +L G P GE+ + Sbjct: 974 GRATARGTLAHAMLAEADLAAPPLERRAQLAAAAARRGYDPRSPGVRRILGEVARFANAE 1033 Query: 923 EMQQLADRVIACRQPGQ-SMEIDLAC-----NGVQITGWLPQVQPDGLLR--------WR 968 + LA+ R + + L V + G + + D R + Sbjct: 1034 GGRALAEAARDGRLRREVPFLLRLPSRTRGDPSVYLVGAIDALMVDRRARALTVVDYKYA 1093 Query: 969 PSLLSVAQGMQLWLEHLVYCASGGNGESRL 998 A +L L V A + ++R+ Sbjct: 1094 TWRPDAADRYRLQLLAYVLAARRAHPDARV 1123 >UniRef50_C1ZK16 ATP-dependent exonuclease V beta subunit, helicase and exonuclease domain-containing n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZK16_PLALI Length = 1226 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 86/661 (13%), Positives = 186/661 (28%), Gaps = 112/661 (16%) Query: 382 PQREVEVLHDRLLAMLEED-PTLT----------PRDIIVMVA---DIDSYSPFIQAVFG 427 +RE + + R+L +L + P + P DI ++ +++ Y ++A Sbjct: 556 RRREADWIARRILELLADPTPRIREKSGPWRTIVPGDITILFRALTNLEVYEQALEA--- 612 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + Y ++ RA + + L D ++ LL P + Sbjct: 613 -----AGIDYYVAGGRAFFAQQEIYDLAHLCQFLDDPEDGFSLVGLLRSPFFCFSDPL-- 665 Query: 488 EGLRYLRQWVNESG-IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + + + +G I + + L +F LG +E Sbjct: 666 -----IHRLASRAGGITQSLFAEASVVSGLSPEETAQVQFAAQ--TLGSLVEQRDHW--- 715 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 P EL G +++ FL + Sbjct: 716 --PLARIIRRALELTG----------------------------YEAIVSQEFLGSRKLA 745 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ-RLDQERISQRFLAGPVNICTLM 665 IE + + A A ++ LR+ + Q ++ + + V + ++ Sbjct: 746 NVHKAIE-----LARQFDLAGGSRAAFVTQLRESIDQESREELAATHPESSSVVRLMSIH 800 Query: 666 PMRSIPFKVVCLLGMND----GVYPRQLAPLGFDLMSQKPKRGDRSR------------- 708 + + F VV + MN P L P L++ G+R + Sbjct: 801 QSKGLEFPVVFVADMNRPRKTESLPPTLHPQLGALVTPSNPLGERQKHPVGQFIEIMEEA 860 Query: 709 --RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA 766 ++ + L A A+ L +S G D + P +LV + + ++ Sbjct: 861 ASLEEYQRLLYVAATRARDLLILS-AGIKGFDEGKFSPWMLVLKQVFHLETGLLRNDPWF 919 Query: 767 LNCDE---SEARVKAHLTCLHTRMPFDPQNYQPG-ERQSYAREW--LPAASQAGKAHSEF 820 + E + + T D + + G + S+ + W L A Sbjct: 920 ASGHEDVKTPQEIPLIRTHHQPPQFIDHRVQRQGVHKLSFPQVWNELELAESLPWPQLVA 979 Query: 821 VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQI 880 + + L+ F + + + ++ +L + + Sbjct: 980 DVQRGAEGRRRLSVSRLEEFQEQSSSKLKSLVPAGELEAHSASLSRSDAELLGEMIHGVL 1039 Query: 881 NQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQ-----EMQQLADRVIACR 935 + ++ + L R G E Q +L D + Sbjct: 1040 --ERFEPRAAEESEKALLHRLWLWCQRQPAPPGGQILEQAQQWLKTFASTELIDELAMAS 1097 Query: 936 QPGQSMEIDLACN--------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVY 987 + + +E L +I G + + D W ++ + L+ Sbjct: 1098 ELNRELEFSLDWKMTGEEPKRETEIYGLIDVLMKDSQDDWIILDYKTSRLAAGVTDELLL 1157 Query: 988 C 988 Sbjct: 1158 Q 1158 >UniRef50_B2A7J4 DNA polymerase III, epsilon subunit n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A7J4_NATTJ Length = 864 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 80/248 (32%), Gaps = 33/248 (13%) Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGY-----AMESAQGEWQSVLPYDESSGLIAE 559 G D ++ P ++ + + AM+ + ++ + E E Sbjct: 609 GYDTVDISRRYFPRLEKYNLESLCEDLQISSKPTHRAMDDVEATFELLQILLEKIKPGIE 668 Query: 560 LVG--------HLASLLMQLNIWRRGLAQERPLEEWLPVCRDM-LNAFFLPDAETEAAMT 610 A+L + LN WRR RP E V ++ L ++ D + + Sbjct: 669 KRKEYVNSYGDKFANLAIALNSWRRKTLTMRPPELLSHVIQESGLADYWKKDKQRINNL- 727 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 ++ +I + L + + + L + V + T+ + + Sbjct: 728 ---KELVSIFDYFDDETLSPNMSLKNILEYV--SLGSDSDRHVLDQDKVALLTVHQAKGL 782 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 F V + +D +P + D++ LF A+ A+Q L+IS Sbjct: 783 EFDAVFIASADDNNFP-------------YFRNKKLGNIDEEHRLFYVAMTRAKQALFIS 829 Query: 731 YIGRSIQD 738 + + Sbjct: 830 WASKDEHS 837 Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 38/274 (13%), Positives = 94/274 (34%), Gaps = 26/274 (9%) Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 Q+EVE++ D++ ++ + +DI ++ + + + A + Sbjct: 355 IIKGAHRQQEVELIADQIFRLV-REQGFKFQDIALLTR-----TNQVNHLISQELAKNQI 408 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 P+ D ++ ++ L L ++ S + +L P I E+ + L Sbjct: 409 PHFTVDSYKFFRRSEIKDAMAYLRLLFNKHDSNSLRRILQKPA----RGIGEKTIETLLN 464 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 ++ G++ + + +F ++++ + + + E + Sbjct: 465 IPSDVGLKLVDFANTSTLKYRDPFARLVNKFEQNKLVVFDVETTGLDTTKDEII--ELAA 522 Query: 556 LIAELVGHLASLLMQLNIW--------------RRGLAQERPLEEWLPVCRDMLNAFFLP 601 L A G + L + L Q +P E+ L + ++ L Sbjct: 523 LKAGKDGVVDEFHEYLRNSKPVGESFQVHGISDQVLLEQGKPPEKSLASFTNFIDDCDLV 582 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 +T++E Q + ++ + L D V +S Sbjct: 583 GHNVNYDITMVENQCKKLLNQDLELHGYDTVDIS 616 >UniRef50_B8GJD7 UvrD/REP helicase n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GJD7_METPE Length = 921 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 69/225 (30%), Gaps = 26/225 (11%) Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L +++ ++ ++ + L V + TL + + F VV + +N G +P P Sbjct: 520 LEYIQEHAMKQAEEGGAGEELLPDAVTVTTLHKAKGLQFPVVFIPRLNTGEFP-SDRPDR 578 Query: 694 FDLMSQKPKRGDRSR----RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 P DR R +D+R LF + +++ L++S + D PS Sbjct: 579 AVWFVPSP-LFDRDRYTTSLEDERRLFYVGITRSEKYLFLSGHRQRSGDLPPAEPSTFFS 637 Query: 750 EL-IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT-------------------RMPF 789 E D++ P + + T F Sbjct: 638 EYPRDHVVDRFPCPAKGGETSHTATPISDRSPARIETSWSALRYYAHCPFDYKLRHLYGF 697 Query: 790 DPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPL 834 DP + L A + +P + E + L Sbjct: 698 DPMPREELGFGRAVHSVLAAVHTQIVRGTFDPAEIPDLVDEHLLL 742 >UniRef50_A4XDF1 UvrD/REP helicase n=6 Tax=Actinomycetales RepID=A4XDF1_SALTO Length = 1067 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 14/141 (9%) Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L L +LA + + + A V + TL + + F VV L+G DG+ P + Sbjct: 935 DLDLFLSQLATGAEVDALD--PRAQAVTLLTLHAAKGLEFPVVFLVGAEDGLLPLRWP-- 990 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQE 750 D ++R LF + AQ +LY+S+ R + ++E PS + Sbjct: 991 --------GSEPDDDAVAEERRLFFVGVTRAQDRLYLSHAARRFRHSTEYDCRPSPFLST 1042 Query: 751 LIDYIGQSHYLPGDEALNCDE 771 + + + P + Sbjct: 1043 IDPGLFERLGEPEPRRPKDRQ 1063 >UniRef50_Q10213 ATP-dependent DNA helicase srs2 n=1 Tax=Schizosaccharomyces pombe RepID=SRS2_SCHPO Length = 887 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 39/349 (11%), Positives = 103/349 (29%), Gaps = 64/349 (18%) Query: 389 LHDRLLAMLEEDPTLT-PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 + + ++ P L DI ++V S + A ++ +PY + Sbjct: 351 IAREIKRIVGSCPELIFYNDIAILVR-----SSSLTRSLEHALSELGVPYRMVGVNKFFD 405 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID 507 + I+ L + ++ + ++ +++VP +I + + + Sbjct: 406 REEIRDLIAYLRVLANKDSTS-LIRVINVPP----RNIGKTKIDRII------------- 447 Query: 508 DDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567 F R L + + + +++L + + + Sbjct: 448 ------------------FESERRGLTFWQTLNEVKNENILLSQRNDKSFLKSLKSFLCS 489 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA- 626 + +L L + L + + + + + + ++ + Sbjct: 490 ISKLENRYLSNGHSATLSDLLLGILSEIKYYEYLVRKNKETVEEKWENVMELVQQSDNIS 549 Query: 627 ----QYGDAVPLSLLRDELAQRLDQERISQRF-LAGPVNICTLMPMRSIPFKVVCLLGMN 681 + + +L ++ Q+ + V I TL + + + VV L + Sbjct: 550 CIFYELDYKISTIVLLQNFLTQIALVNEEQKEGESQKVTISTLHAAKGLEWPVVFLPCLC 609 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 + + P + D++R L AQ LY+S Sbjct: 610 ENIIPHSRSDD----------------LDEERRLLYVGATRAQALLYLS 642 >UniRef50_C6P6S9 Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6S9_9PROT Length = 825 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 105/744 (14%), Positives = 206/744 (27%), Gaps = 131/744 (17%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR 308 GD A + + R++S E L + +A Q LA + R Sbjct: 78 GDADAFAAAVQQAYQARKNSTLQLEARLVFELWHAMQSGEELDAGRAYQQRLAKLAEQAR 137 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK-RPL 367 +++L + F+D ++ +L ++ S + + + + Sbjct: 138 QPLFVLRTSDWCALEQRFLDEYA----GRAAVEVFDLRKMDAQWGSLLHESSAGLRSQSI 193 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 L + F S ++E ++ L+ RDI ++ D + ++A+ Sbjct: 194 ASLGGKLGFFAATSLEQEARAAAMQVRLWLQAGK----RDIAIVAQD-RVVARRMRALLE 248 Query: 428 SAPADRYLPYAISDRR--ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 A ++D + V L+ S F D+L LL P + A Sbjct: 249 RAEIM------VADETGWTFATLSVSTVLDRWLTALQSDFYHHDLLDLLKSPFIFADMTA 302 Query: 486 TE--EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 +E + L Q + + G+ G+ Sbjct: 303 SERKSAVYQLEQLLRKQGVVAGL------------------------------------- 325 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF-FLPD 602 + E ++ + + L L ++R L EWL R+ L Sbjct: 326 -EKFSALVEHETVLHQPLARLRQAAALLEQH-----KKRTLAEWLAALRESLQVLSIDSG 379 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNIC 662 + A + + E + P R LAQ+LD + + V Sbjct: 380 LLQDDAGMQLLGALETWQQELTADEGRYRFP--EWRRWLAQQLDTQTYRDNSIDSQVRFT 437 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR-----RDDDRYLFL 717 L R F V LLG + P + + + +R R D L L Sbjct: 438 HLAATRWRAFDAVLLLGCDADHLPSVADGGRWFNDAVRSSLNLPTRAINAERQRDDLLSL 497 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 AL + +++ ++ S ++ L D + Sbjct: 498 LALN---DCVLVTWQK--DRNGEAGLLSPYLEILRDLHLLTWGDD--------------- 537 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETL 837 E +Y A + ++ +P V + Sbjct: 538 ----------------LAESELPAYLAAEEARAVELPQSAQPAPVVQKEIIPTGVSISAY 581 Query: 838 QRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE---QDDA 894 A P + + + L++N E E +E + +L E + Sbjct: 582 NSLVACPYQFYARHILRLNELDEVQE-------GIEKRDYGERVHAILQRFHERYPRVSE 634 Query: 895 ERLFRRFRAAGDLPYGAFGEIFWETQCQEM--------------QQLADRVIACRQPGQS 940 A + F ++ + Q+ + R Sbjct: 635 HSRDTMEVALRQISEEVFADLLQQDFEARAWLARWFKALPAYIEWQMVNEAQGWRYVESE 694 Query: 941 MEIDLACNGVQITGWLPQVQPDGL 964 D GV++ G + ++ +G Sbjct: 695 SAFDWELEGVRLRGRIDRLDMNGQ 718 >UniRef50_A5HYY0 ATP-dependent helicase/nuclease subunit A n=11 Tax=Clostridia RepID=ADDA_CLOBH Length = 1279 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 49/363 (13%), Positives = 114/363 (31%), Gaps = 55/363 (15%) Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 L E L RDI++++ +++P +F A +P ++ Sbjct: 602 KKLGEYRNLQYRDIVILMRATSNWAP----IFVEELAKEGIPVFADTNSGYFDTAEIKTM 657 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 ISLL + D+ +L++L P+ T++ L +R ++ Sbjct: 658 ISLLQIIDNPLQDIPLLSVLRSPI----ASFTDDELIDIRMVNKNITFYECMEIIYRLYK 713 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 ++ + +E + + +E +L + S + +L +W Sbjct: 714 NEKLDSYYS-----------FYIEDENKINKIIKDMNE------KLKNKICSFIEKLKLW 756 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 R + ++E++ + + A A + + + L Sbjct: 757 REK-SIHIDIDEFIWFLY--VETGYYGYAGALQAGEQRQANLRILFQRAKQYAKTSYKGL 813 Query: 635 SLLRDELAQ-RLDQERIS----QRFLAGPVNICTLMPMRSIPFKVVCLLG---------M 680 + + + + + V I ++ + + F VV L G + Sbjct: 814 FNFINFINKLKFSSGDMGSAKILGENENVVRIMSIHKSKGLEFPVVILSGTGKNFNMTDL 873 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRS-------------RRDDDRYLFLEALISAQQKL 727 N + + G D + + + S ++ + AL A++KL Sbjct: 874 NKNILFHRDLGYGPDYVDTERRIAYPSLVKNIIKNKIRLETLSEEMRILYVALTRAREKL 933 Query: 728 YIS 730 I+ Sbjct: 934 IIT 936 >UniRef50_B7GLR0 Putative uncharacterized protein n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GLR0_ANOFW Length = 716 Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 52/116 (44%), Gaps = 9/116 (7%) Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 ++ L+ + + + A V + T+ + + F +V ++G DG+ P Sbjct: 600 FKTIQAFLSHVKRVQAYANKTCADGVQLMTIHRSKGLEFPIVYIIGAVDGLLPH------ 653 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 D + + GD + +++R L A+ A+Q+L+IS S++ + S L+ Sbjct: 654 -DYALEAYRNGDVAPLEEERRLLYVAITRAKQRLFISVP--SMRRLKKANASRLLS 706 >UniRef50_Q029V8 ATP-dependent DNA helicase, Rep family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q029V8_SOLUE Length = 788 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 52/416 (12%), Positives = 127/416 (30%), Gaps = 78/416 (18%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 A AG +E K+ DS + + + + E + D L +P Sbjct: 296 LAAAGAVVENNKARKGKKLWTESDSGELLGLYAGYDSENEALFIADTTEKYLASNPG--- 352 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 + ++ +S S I+ Y + + ++ ++ L L S Sbjct: 353 DHVAILYR-TNSQSRQIEEALRRYGRK----YNVVGGFSFYQRAEIKDMVAYLKLASSNV 407 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 S ++ +++ P I + + ++ + G + W Sbjct: 408 DSVSLMRVINTPA----RGIGRTTVEQIERYGRDHG-------------------LNLWE 444 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 + R++ + + + +L+ +L++ + + Sbjct: 445 S-IERIIDDQQLSTRSQ----------------SSLVVFRNLIQELSLVASTSSLPDLIR 487 Query: 586 EWLPV--CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 L R ML E+E + +++ A + L D A Sbjct: 488 HILERTGYRKMLQQ--EKTPESETRLENLDELINAAADA-----HERGETLGDFLDNAAL 540 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 D + ++ V + TL + + F +V L GM G++P + + + ++ + Sbjct: 541 VADVDSYDEQSP---VTLMTLHNAKGLEFPLVFLSGMELGLFPHSRSMNSEEALEEERRL 597 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN----SERFPSVLVQELIDYI 755 + A++KL +++ + S + E+ + + Sbjct: 598 ------------CYVGMTRARKKLVLTWAKMRRRFGGGEQERSTASWFLSEVPENL 641 >UniRef50_B5GJP0 ATP-dependent DNA helicase n=20 Tax=Streptomyces RepID=B5GJP0_9ACTO Length = 1221 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 59/447 (13%), Positives = 116/447 (25%), Gaps = 50/447 (11%) Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 + + D + + + E++ L DR+ + P +I V+ + Sbjct: 459 EALHAPAGKAADGFVRCALLPTHAEEIDWLADRVAHYVRTGTD--PGEIAVLCRTAGDF- 515 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + +A R +P + P + ++ + + ++ LL P Sbjct: 516 ----SRIQAALVAREIPVEVVGLSGLLHLPEIADLRAVCEVLQDPGANASLVRLLTGP-- 569 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 R+ I L L G R + PA G+ + ++ Sbjct: 570 --RWRIGARDLALL-------GRRARFLAGGRTGEDDPARRLAAAVEGIDPAEIVSLADA 620 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 + ++ A L +L RR LA + L+ Sbjct: 621 VDTFVEGGPDAEDGLPFSTGARTRFARLGRELRELRRALADPLMDVLHRVLAATGLDVEL 680 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV-PLSLLRDELAQRLDQERISQRFLAGP 658 AA + + + L L E+ L G Sbjct: 681 SASPNALAARR--RETLGQFLDTAASFAANEPAASLLAFLGYLRTAEQYEKGLDNALPGG 738 Query: 659 ---VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ---KPKRGDRSRR--- 709 V + T + + + +V + G+ +P F + P RGD + Sbjct: 739 ENTVKVLTAHKAKGLEWDIVAVPGLVKAQFPSDRGRERFTARASVLPHPLRGDAATLPEV 798 Query: 710 --------------------DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 ++ L + L S + R PS + Sbjct: 799 PAWTAKGLKAFQDDMREHQSTEELRLGYVTFTRPRSLLLGSGHWWGPEQKRPRGPSAFLT 858 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARV 776 L D+ + H A + Sbjct: 859 ALHDHCARGHGEIEHWAEPPGPEDENP 885 >UniRef50_A0PR94 ATP-dependent DNA helicase n=12 Tax=Mycobacterium RepID=A0PR94_MYCUA Length = 1101 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 119/794 (14%), Positives = 215/794 (27%), Gaps = 159/794 (20%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSP------------QREVEVL 389 +LEL + + + +P S+ H S +V+ Sbjct: 342 VLELRTSWRNPPRALHLANAISA---EPRRRSVAVHALRSRPDAPAGTVRCALLADVQAE 398 Query: 390 HDRLLAML------EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 D + L ++P V+V +P A R +P + Sbjct: 399 RDWIADQLQGHYQRAAADGVSPPTAAVLVRRNADAAPIADA-----LVARGIPVEVVGLA 453 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL-RQWVNESG- 501 S P + +++L L + +L P R+ + + L R+ V G Sbjct: 454 GLLSIPEVADLVAMLRLVGDPTAGAAAMRVLTGP----RWRLGGSDVAALWRRAVALVGG 509 Query: 502 --IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 + + V P T + + +W S Y+ L AE Sbjct: 510 PQVGASVSPGAVAAAAGPDTDTACLADAI--------CDPGPADWYSSAGYERIGALAAE 561 Query: 560 L---VGHLASLLMQL-NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 L GHL L L RR L + + A L A Sbjct: 562 LNALRGHLGHWLPDLVAEVRRVLGLDCDVRAAATASGAWAGAEHLDAFADVVADYAERTA 621 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 A A A + + E+ L +++ V + T+ + + ++VV Sbjct: 622 ISAGSALSTKASVDGLLAYLDVAAEVENGLPPAQLTVA--RDGVQVLTVHAAKGLEWQVV 679 Query: 676 CLLGMNDGVYPRQLAPLGF--------------------------------------DLM 697 + ++ GV+P + + D + Sbjct: 680 AVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASVGALGIPVLDTSAVTNRKQLSDTI 739 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 S ++ D+ R D++R L + A+ + +S R PS + EL D I + Sbjct: 740 SAHREQLDQRRVDEERRLLYVGVTRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIER 799 Query: 758 SHYLPG--------DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE---- 805 S D A E + + + P + E Sbjct: 800 SAAAGDPCGTVDQWDRAPVAGERNPLLDDVVEAVWPTDPLATRRGDVERGARLVAEAISA 859 Query: 806 ------------------WLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRA 847 W + V P LP + + L PV A Sbjct: 860 DAGVEAPAGGAAVADIEGWTADVDALLAERARAVGPPTRALPNQLSVSGLVELARDPVGA 919 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDL 907 + RL T I + + L GDL Sbjct: 920 --RQRLVHRLPTRPDPHA----------QLGNIFHTWVQQFYGAELLFDL-------GDL 960 Query: 908 PYGAFGEIFWETQCQEMQQLADRVIACRQPGQS-----MEIDLACNGVQITGWLPQVQPD 962 P A ++ Q +++ L + ++ + ++ + G + V D Sbjct: 961 PGAADSDV---GQVEDLAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFED 1017 Query: 963 -----GLLRWRPSL-LSVAQGMQ-----LWLEHLVYCASGGNGESR-----LFLRKDGEW 1006 ++ W+ + M+ L + + + A G ES ++R Sbjct: 1018 PDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTV 1077 Query: 1007 RFPPLAAEQALHYL 1020 L AL L Sbjct: 1078 IPDELPDGMALAEL 1091 >UniRef50_D0MDM9 UvrD/REP helicase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDM9_RHOM4 Length = 1032 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 80/240 (33%), Gaps = 19/240 (7%) Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP-LEEWLPVCRDMLN 596 E + V + AEL LA + L E P +E L ++ Sbjct: 807 EERSYTFGDVAVLYRTEAQAAELQEVLAQAGIPYQKRSHRLLAELPEVEALLAYLQENPK 866 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 E AA T + ++ L R+ELA R + + R A Sbjct: 867 GPLAERLERWAATTSEREALLGVLRALAAQCGD---DLEAFRNELALRSEADLWDAR--A 921 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 V++ TL + + F+VV ++G +G+ P R D + ++R L Sbjct: 922 EGVSLLTLHAAKGLEFRVVFIVGCEEGLLPLT-----------YDGRVDPEQEAEERRLL 970 Query: 717 LEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 + AQ++L++++ R R PS + +L + + Sbjct: 971 FVGMTRAQERLFLTHAQRRRWMGRVRTPEPSRFLADLPARFVRRRTHTVRRSPTGGRQLE 1030 >UniRef50_UPI0001C41A07 ATP-dependent DNA helicase UvrD/REP family n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41A07 Length = 1546 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 69/543 (12%), Positives = 169/543 (31%), Gaps = 75/543 (13%) Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLH-DRLLAMLEEDPTLT-PRDIIVMVADIDSYSPF 421 K + S + + +RE+E +++ L+++ + D+ V++ + + S Sbjct: 394 KNLREARKESRNIYYIENEEREMEAASIAKIIKGLKDEEKIKNYNDVAVLLRSVLTSSKD 453 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR-----------FVSEDV 470 I VF D +P+ + + ++ +++ ++LL + ++ + Sbjct: 454 IINVFN----DENIPFQVKGLQDLENKDEIKSILTLLHFIIEDDNPQETPIITFWEADWL 509 Query: 471 -LALLDVPVLAARF-DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 L F ++ E L + E + + N +L + + Sbjct: 510 NLRAFTNADFKQTFIKLSSETEEILIEKQKE----FEENVFNYAKLIYNDITGNRFTKRS 565 Query: 529 TRMLLGYAMESAQGEWQS----------VLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + +L E ++ + Y ++ E L L ++ + Sbjct: 566 YKGVLELEDEVLDAVFKEYPKPVLTNKTLREYGITNEDDLEFFNQLNELKFEIFGDDKDF 625 Query: 579 AQERPL---EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 + + + L+ ++ D + + A+ I + II E + Sbjct: 626 DERPTILNVYYRILEICGFLSEDYIFDPKNKQALDYI-GLFTQIIYEYENIISNR--DIR 682 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 L L + VNI T+ + + F VV L G+ND +PR+ L Sbjct: 683 GLYWFLNSNIKNYSY-DIENENGVNIMTIHKSKGLEFPVVILAGLNDSSFPREYEDLRET 741 Query: 696 ---------------LMSQKPKRGDRSR-RDDDRYLFLEALISAQQKLYIS--------- 730 L + + D + +++ A+ AQ L +S Sbjct: 742 KYKNGSAVFYTPRECLRYKSLDKDDVTLHYEEEERNIYVAMTRAQDLLILSKNFKNPKKT 801 Query: 731 -YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC-----DESEARVKAHLTCLH 784 Y ++ + + D + + L+ ++ ++A L L Sbjct: 802 TYSKTLEKEIKAIELKEKISSIKDELDELMKKEDVNDLSFLLKSLNDELKDIRAELKELK 861 Query: 785 TRMPFDPQ---NYQPGERQSYAREW-LPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 + + + + S +W + K + + + + L+ Sbjct: 862 PLIKDHKKIKVLNKQLKELSIEIKWKIKDLKYEDKIMDDLIDLFNLDEDSGLTRDDLKNM 921 Query: 841 WAH 843 + + Sbjct: 922 FLN 924 >UniRef50_B1VAQ4 ATP-dependent DNA helicase n=1 Tax=Candidatus Phytoplasma australiense RepID=B1VAQ4_PHYAS Length = 713 Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 48/375 (12%), Positives = 122/375 (32%), Gaps = 68/375 (18%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E + + ++ +++ RD ++ ++S F++ +PY + Sbjct: 335 EAQYIVQKIKHLVQIYH-YNYRDFAILYR-VNSLGHFLE----KYLISAGIPYMFLGNLS 388 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 V++ F++ L L + + +++VP + I + + L + V E Sbjct: 389 FYQKKVVKDFLAYLHLAVNPLQDFYLRRVINVP----KRQIGKITITCLEKIVQEK--ER 442 Query: 505 GIDDDNVRELELPATGQHTWR----FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 + ++P + + + + L L + + + ++ Y + Sbjct: 443 SFFEILKDYKDIPVSDKTQKQLYQFYCLIEELNNKIINNEFEKLSDIITYVDQKTQ---- 498 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 ++ L ++ ++ ++ A+ ++ I Sbjct: 499 -----------YSYQISLETQKNPQKANEEQSSLV------------AIEELKSILNQID 535 Query: 621 AEGLGAQYGDAVPLSLLRDE--LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 G+ ++ +E L S V + T+ ++ + FKVV L Sbjct: 536 ESFQGSNLQK---INNFLEEVSLNNETKINNSSGNKANNRVKLATIHKVKGLEFKVVFLA 592 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 G+ + D + R L A+ AQ+KL+++ + + + Sbjct: 593 GLEKEFF------------------DDLDDIQESRRLTYVAVTRAQEKLFLTGVSQRMLF 634 Query: 739 NS--ERFPSVLVQEL 751 PSV +E+ Sbjct: 635 GKNFSHEPSVFFKEM 649 >UniRef50_Q9K917 ATP-dependent DNA helicase n=1 Tax=Bacillus halodurans RepID=Q9K917_BACHD Length = 780 Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 85/229 (37%), Gaps = 18/229 (7%) Query: 535 YAMESAQGEWQSVLPYDESSGLIAEL-VGHLASL----LMQLNIWRRGLAQERPLEEWLP 589 + + E +++ + + S L A L + ++ L +L + + L P + Sbjct: 556 FLKKDTLQELKAITIFHDCSLLDALLHLKNVQPFQQKKLKKLLPYFQKLPHLSPTQAISM 615 Query: 590 VCRDM-LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 + + M L F M + +I L + +A+ + + Sbjct: 616 IEKHMGLTDFIKKRGNEGNVMDRGSDDLKDLIVAANSFATIPTF-LDHVSHMIAKHHELK 674 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 + + A V + T+ + + F+ V LL +G P D + GD Sbjct: 675 KAPAQEEA--VQLMTIHRAKGLEFQHVYLLSAVEGSLPH-------DYALDAWREGDDRP 725 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 +++R L A+ AQ++L+IS S++ S V+E++ Q Sbjct: 726 LEEERRLMYVAMTRAQEQLFISVP--SMRRGKNAQRSRFVREMLRNHRQ 772 >UniRef50_B1VFC7 Putative ATP-dependent DNA helicase II n=2 Tax=Corynebacterineae RepID=B1VFC7_CORU7 Length = 716 Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 63/202 (31%), Gaps = 21/202 (10%) Query: 581 ERPLEEWLPVCRDMLN----AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 EE L + L P E +I E L A + Sbjct: 425 PETREEILNAAKAALAPVGLTAAEPSGAQERQRWQSLNALVELIEEILTA--NPQISYLG 482 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + L +R R V + ++ + + + V L+G+ +G++P A G Sbjct: 483 VIGMLQER---VRSKNPPKVQGVTLVSVHMAKGLEWDAVFLVGLYEGMFPIHHALKG--- 536 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 G +++R L + A++ L++S+ + + S + +D + Sbjct: 537 ------AGAADAIEEERRLLYVGVTRAREHLHLSWALARQEGGKQ---SRVRTRFLDDLV 587 Query: 757 QSHYLPGDEALNCDESEARVKA 778 E + R + Sbjct: 588 PWEDEDDGELAIDLDQARRRRK 609 >UniRef50_P12954 ATP-dependent DNA helicase SRS2 n=7 Tax=Saccharomyces cerevisiae RepID=SRS2_YEAST Length = 1174 Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 64/424 (15%), Positives = 120/424 (28%), Gaps = 81/424 (19%) Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTL-TPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 F S RE L L+ P L T D ++V I+ + SA + Sbjct: 359 FLEAPSLVRE--------LLYLKALPNLFTFNDFAILVRQ----RRQIKRI-ESALIEHR 405 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +PY I + A ++LL L S +LA L P + ++ Sbjct: 406 IPYKIIRGHSFWDSKETRAMLNLLKLIFSPNDKHAILASLLYPA----RGLGPATGEKIK 461 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 ++ +V ++ +++L + + + Sbjct: 462 NALDTL-------ATDVSCFQILKDISS------KKIMLDIPTKGRSVIADFISMIENCQ 508 Query: 555 -GLIAELVGHLASLLMQLNIWR---------------RGLAQERP--LEEWLPVCRDMLN 596 L + L+G L+ L +L L + P L + N Sbjct: 509 LLLQSTLLGGLSDLFDKLYELSGLKYEYLYKDGKKKNDQLEKSEPNLLNARHKNIELLKN 568 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ---- 652 F +++E++ + +A E + + L + Sbjct: 569 YFLALLSKSESSDKEKNEAIKAATDEAEPIE-NKVITPKEYLRNFFNSLSLHSDAAEEEE 627 Query: 653 ----------RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP---------------- 686 R G V I T+ + + + VV + G +G+ P Sbjct: 628 SESNKDAKIKREKNGFVTISTIHGAKGLEWPVVFIPGCEEGIIPCVFNDDKKDESEEDEE 687 Query: 687 -RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 Q + D++R +F A A+ LY+S + R S Sbjct: 688 EDQENSKKDASPKKTRVLSVEDSIDEERRMFFVAQTRAKYLLYLSNTVTVEDVDRPRIAS 747 Query: 746 VLVQ 749 + Sbjct: 748 RFLT 751 >UniRef50_Q2S575 ATP-dependent DNA helicase n=2 Tax=Rhodothermaceae RepID=Q2S575_SALRD Length = 712 Score = 81.3 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 57/478 (11%), Positives = 143/478 (29%), Gaps = 92/478 (19%) Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 G R+ + + ++ + + + ++ + ++E R+ E + + Sbjct: 283 GADFRNIFRFPDEFDDTEVVKLEHNYRSTQPILDLANRVIEQAERSYDKTLFTEKTEGEL 342 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD-IDSYSPFI 422 + D + E + + +L + + + D+ V+ ++Y + Sbjct: 343 PALVPAADGDM----------EARFVAEMVLRL--REDGVPLSDVAVLFRSSHNAYDLEV 390 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 + R +P+ ++ ++ L + ++ + L Sbjct: 391 E------LNQRNIPFVKYGGMKLNEAAHIKDVLAHLKVVENPQDAASWNR-----ALQLI 439 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 I + + L +W E+ Sbjct: 440 HGIGPKTAQSLIEWTTEAA----------------------------------------- 458 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWR-RGLAQERPLEEWLPVCRDMLNAFFLP 601 + L + + L L L R + +E L + + + Sbjct: 459 --EDPLTLGDGAPFSDRYAARLKQLFSTLRHVRSDDTSVTEQVEAILDYYQPLFENKYAD 516 Query: 602 D-AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 D + + + ++ ++ L + LDQE + Sbjct: 517 DHPKRAPDLEHLAGL---AANHESRQRFLSSLTLDPIE---LTALDQETGEDDEPP--LV 568 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + T+ + + F V L+ DG P + A + D++ LF A+ Sbjct: 569 LSTIHSAKGLEFHTVFLIRALDGTIPSRHA------------LREPGGVDEELRLFYVAV 616 Query: 721 ISAQQKLYISYIGRSIQDNSERF---PSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 A++ L+ISY + + PS V++L D + + L ++A++ + +A Sbjct: 617 TRAEEGLFISYPMTQYRRGQGEYMTTPSRFVEDLPDDVLEPVQLVEEDAVDENAPDAP 674 >UniRef50_C5V6X1 DNA helicase/exodeoxyribonuclease V, subunit B n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V6X1_9PROT Length = 902 Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 89/613 (14%), Positives = 158/613 (25%), Gaps = 100/613 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I H ++E + ++ L E T I V+V D + + Sbjct: 230 IGLFGAHGMEQEAQAADVQVRRWLLEGKTA----IAVVVQD-----RMVARRLRALLERA 280 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD-ITEEGLRY 492 + + V + L F +DVL LL P L A + ++ Sbjct: 281 RVMVQDETGWTFATLSVSTVLMRWLEAVQGDFYYQDVLDLLKSPFLFAENQVLRKQAAYQ 340 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 Q V G+ VL +E Sbjct: 341 FEQLVRRHGV--------------------------------------------VLHLNE 356 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQER-PLEEWLPVCRDMLNAFFLPDAETEAAM-T 610 L L++L R L L WL L+ + + A Sbjct: 357 HIAAAEREAPELVPALVRLRQAARLLTARHASLSGWLSALHQSLDLLGVIHGWRQDAAGQ 416 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 + Q E + S R L+Q+LD + PV L R Sbjct: 417 QLMQLLALWQEELQAD--TTSCSFSEWRRWLSQQLDLNTYRDLSVDSPVLFTHLAATRWR 474 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR-----SRRDDDRYLFLEALISAQQ 725 F V LLG + G P + + + + G + D L L A+ Sbjct: 475 CFDAVLLLGCDAGHLPAPVNAGLWFNDAVRTTLGLPLSCVQQDQVRDDLLSLLAMNGT-- 532 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 + ++ + S + + H L L E + Sbjct: 533 -VLATWQAN--CNGEPNLLSPYF----EMLRAMHLLAFGHDLMNVELGGLLPLAQV---R 582 Query: 786 RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPV 845 D + + + + A P +P+ + A P Sbjct: 583 IQDSDRKGLPRTTKVLHTKFLREGCRIQDPAKMPRPVVPPELIPQKISPSGYNSLVACPY 642 Query: 846 RAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL---------VEQDDAER 896 + F + L +N + E L+ ++L ++ +AER Sbjct: 643 QYFARHVLHLNELDDVRED-------LDKRDYGTWVHEVLQRFHAEIPQLGSRDKGEAER 695 Query: 897 LFRRFRAA---GDLPYGAFGEIFWETQCQEMQQL---ADRVIACRQPGQSMEIDLA---C 947 + RR L + + + + + A + E+ Sbjct: 696 VLRRISDEVFANALAHDYLAQAWLLRWQGLIPAYLHWQLEIEADGWRYHAAEVPFEVAVS 755 Query: 948 NGVQITGWLPQVQ 960 + + G L +V Sbjct: 756 GNLLLRGRLDRVD 768 >UniRef50_D1YX62 Putative ATP-dependent DNA helicase n=1 Tax=Methanocella paludicola SANAE RepID=D1YX62_METPS Length = 1087 Score = 80.9 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 77/681 (11%), Positives = 178/681 (26%), Gaps = 122/681 (17%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 + IL +R + + K L + +P+ + + + + ++E+ Sbjct: 344 NAILRTAHRLIVNNYDDPEETKLLKSALGVEGDKVKLIRTSNPKEQARRVIEEIERIVED 403 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL- 458 D + I V+ S + +Q+ F S R +P+ + P + ++ L Sbjct: 404 D--IDFNRIAVLFRSHSS-ANAVQSAFES----RSIPFQLISNNGFLKRPEVRTALAYLY 456 Query: 459 ---SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 +L D R+ ++ + +L ++ +T + L + I+ + L Sbjct: 457 VIANLEDPRYGADQM--WWK--LLHYKYGLTMKDSHILAKAAKRDTIQNVLLGKLPDALS 512 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 + + +L + L L++LL+ + Sbjct: 513 WDGKKK------INSLL------------------AKIEELRKNKNKSLSNLLLDVYEA- 547 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 + T L + ++A D Sbjct: 548 ----------------SGLSRELSHESTRTSRIWMLNLRYLHDLVAGFEDFYGADLAGFI 591 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ------- 688 L + + A V + T + + + V ++ + +P Sbjct: 592 EYMRMLDELGEDLDAPTLKEAQGVVLMTCHGAKGLEYDYVFIVDLAKDKFPITAGGRAPL 651 Query: 689 ---LAPLGFDLMSQKPKRGDRS------------RRDDDRYLFLEALISAQQKLYISYIG 733 F + + D+ R ++R L A A+++LY+ + Sbjct: 652 LPDELNDRFRDIFEAEWESDKELDEALKARKRELRLKEERRLAYVAYTRAKKELYLCHP- 710 Query: 734 RSIQDNSERFPSVLVQE-------LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 +S +N ER PS+ + E + D I + K Sbjct: 711 QSYGEN-ERSPSMFIAESCFEDNSVHDDIELIQDDEVKVGEMAKDGALDKKKDEIKRLVL 769 Query: 787 MPFDPQN-YQPGERQSYAREWLPAASQAGKAHSEFV-------------QPLPFTLPET- 831 D + Y + PL Sbjct: 770 STIDSEPQLALYNLLLYQGLCCHNLPSGIPEAARAREDAALIMKDIGDGTPLGLKFDPEE 829 Query: 832 --VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV 889 + +L+ + P + L++ R +D E + L + L Sbjct: 830 VVLSHSSLKIYRDCPKKFELARLLRMPSRYDDEEEGE------GALGFGTFVHEALELAA 883 Query: 890 EQD-----DAERLFRRFRAAGDLP--YGAFGEIFWETQCQEMQQLADRVIACRQPGQSME 942 + + + + ++ ++T +R Sbjct: 884 KNKVKSRQELDDIAAELLKEPGYKDIDVKRAKVIFDTFWAR-----NRTKLGNVVMTEQA 938 Query: 943 IDLACNGVQITGWLPQVQPDG 963 G + +G + +V Sbjct: 939 FSFELGGFRFSGKIDRVDELN 959 >UniRef50_C8PEY8 Putative uncharacterized protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PEY8_9PROT Length = 970 Score = 80.9 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 52/412 (12%), Positives = 125/412 (30%), Gaps = 58/412 (14%) Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 ++ ++A + ++ +I L + + L L D + + Sbjct: 539 EHFEALITKLACLPKISDALLQEKLKEPLYLIKILLRKFKDENLSLGNLIDLFLLEISRI 598 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 ++ G V + L+ R + F V + ND + P++ + F + + + G S Sbjct: 599 KLDDV-RGGKVTVMGLLESRGLQFDGVIIPDFNDDLVPKRSSGEMFLNSALRARAGLISH 657 Query: 709 RDDD--RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA 766 D + + + + L+ +K I Y + E+ PS + +S + D Sbjct: 658 ADRENLQRFYYDGLLRGAKKSAICY-----LQSVEKLPSRFL--------KSFEVQQDAE 704 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 + ++ F + ++P L H F Sbjct: 705 FSQED-------------YLRLFGREEFKPA---------LCGQEDPVARHDFF------ 736 Query: 827 TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN 886 E + L F + +++ + + E L G + Q+L Sbjct: 737 --AEELSFSRLDTFLECKRKYYYRYVFGLKEGLKFGEDN-----ALLGKILHTSFQRLYE 789 Query: 887 ALVEQDDAERLFR-RFRAAGDLPYGAFG-EIFWETQCQEMQQLADRVIACRQPGQSMEID 944 + E+ + A + F E+ + + + L G + + Sbjct: 790 RAGMKFSMEKFRSIYSQLAREAGIARFDVELELKAVEKLARLLEGHEQIWSFSGSEVSLK 849 Query: 945 LACNGVQITGWLPQVQPDG-----LLRWRPSLLSVAQGMQLWLEHLVYCASG 991 +GV+++G + ++ D ++ ++ + A Sbjct: 850 GELDGVRLSGRIDRIDEDKAGRKFIIDYKRGSAKKHMEKFQLTFYRALLAQE 901 >UniRef50_A7VD84 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7VD84_9CLOT Length = 672 Score = 80.9 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 48/399 (12%), Positives = 113/399 (28%), Gaps = 81/399 (20%) Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA 413 N E + ++ + + ++E + + ++ M + +I V+ Sbjct: 293 NKERYKKAIHSAFEKSQCERVHVIEVDGMRQETDGIVQKIRKM--NQNGIPYSNIAVLYR 350 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRA-RQSHPVLEAFISLLSLPDSRFVSEDVLA 472 + +P+ + D SH V+ + + L Sbjct: 351 TNSE-----PSGLAMKLMQSNIPFRVKDSIPDLMSHFVVVNILDYIKAALGNRERALFLR 405 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 +++ P ++V + LE RM Sbjct: 406 IINRP----------------NRYV------------SRESLETDPVDT-------ERMK 430 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 Y Q+++ + IAEL +N R+ + Sbjct: 431 EFY--RDNNRLVQNMVTLEADLRRIAELKP-----YAAVNYIRKAVG-----------YD 472 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 + L + I ++Q + + + +E +L ++ + Sbjct: 473 EYLKEYASYRGINPQEYMDIADEFQEMARDA-----DSFIEWFNFLNEYRIKLKEQMKTT 527 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 V + T+ + + F V ++ +G+ P + + +L +++ Sbjct: 528 DHTRDAVVLATMHGAKGLEFDQVFIMNAVEGMTPHKKSVADAEL-------------EEE 574 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 R +F A+ A+ LYI + S V E+ Sbjct: 575 RRMFYVAVTRARYGLYIYVPK--VVYGKTARISRFVTEM 611 >UniRef50_C0QTS0 Putative UvrD/REP helicase n=1 Tax=Persephonella marina EX-H1 RepID=C0QTS0_PERMH Length = 1021 Score = 80.9 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 50/426 (11%), Positives = 120/426 (28%), Gaps = 108/426 (25%) Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS------ITFHVCHSPQREVEV 388 L +++D L + + + S + S V Sbjct: 410 LFFVENDFLNRDYSNRKVKELYHLEEKYIPELFYSSEKSLDITDPVEIVKTESDTEPV-A 468 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 L +++ +L + +P DI+V+ +IQ +P+ + Sbjct: 469 LAEKIKQLL--NSGYSPEDILVLFRSRSKTDRYIQE-----LRKSNIPFISFLSSNFYNS 521 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 + +++L L + +L +L PV F +++ + +R + Sbjct: 522 VEVITVLNILKLIQYPYDQLTLLKVLKSPV----FSFSDKEIYQIRNDLY---------- 567 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 + R+ + + L + Sbjct: 568 -------------------IDRI------------------------PQLKEIKRLEEIK 584 Query: 569 MQLN--IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 LN + ++ P+ E F + + + +E+ + I G Sbjct: 585 DSLNISQILDRVYRDLPVLE-----------IFSLYPDGKQKVANLEK-LKFIADRLEGE 632 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGP--VNICTLMPMRSIPFKVVCLLGM---- 680 + L L ++ V + T+ + + KVV + G+ Sbjct: 633 NFQ----LRDFIQFLEDNRYKDEEDALITTDDRFVKVMTMHRSKGLEAKVVIIPGLSERI 688 Query: 681 ----------NDGVYPRQLAPLGFDL---MSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 D + R ++ ++ ++ R +++ L A A+++L Sbjct: 689 NRSTNGFFTVEDEIMVRIRDDYNREVARTLNFDEEKVKRKIYLEEKRLLYVAFTRAKERL 748 Query: 728 YISYIG 733 + Y G Sbjct: 749 ILFYSG 754 >UniRef50_Q189U3 Putative ATP-dependent DNA helicase n=8 Tax=Clostridium RepID=Q189U3_CLOD6 Length = 688 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 62/454 (13%), Positives = 142/454 (31%), Gaps = 94/454 (20%) Query: 318 ESSQELDAFVDVTPDNLLHNIQS---------DILELENRAVAGVNIEEFSRSDNKRP-- 366 + Q + F PD LL Q DI + ++ N+ Sbjct: 251 DEDQSIYGFRGARPDFLLEFEQYFNNTKKIILDINYRSKSEIVHTANRLIDKNKNRYEKI 310 Query: 367 --LDPLDS-SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 D S+T+ H + E + ++ +++D + D V+ Y IQ Sbjct: 311 IKCSQGDGGSVTYISPHDSEEEALYIAREIIDEIQKDY-VEYSDFAVI------YRTNIQ 363 Query: 424 A-----VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 + VF D +P+ + D S++++ D + S+D+LA L + Sbjct: 364 SRALVDVF----MDMRIPFVVKD--------------SVITIYDH-WASQDILAYLRI-- 402 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 GI+ + ++ R + ++ Sbjct: 403 --------------------------GINPKSNKDWLRIINKPF-------RYISKDSIN 429 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 + E + L + V + L + L+ + L + + + Sbjct: 430 MVKDEKDFITALINKCNLHPKQVKTINDLEIDLS-YLNTLNPKNAISYIRTSL-----DY 483 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 + + + I+ E + L + + ++ Sbjct: 484 DRYVLDYCSNRKIKTNGLVEILNELESSATNFNTVTEFLEHIDRVKTELTENNKNKQTEG 543 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 V T+ + + F+ V ++G+N+G P + + ++ + +++R L Sbjct: 544 VIFTTMHSAKGLEFRNVYIIGVNEGTIPHEKSYDICKEEKKE------EQLEEERRLMYV 597 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 A+ A++KL IS + + S+ + ++ Sbjct: 598 AITRAEEKLCISSTLN--KYGKKVDKSLFINDIK 629 >UniRef50_C6LFT8 ATP-dependent DNA helicase PcrA n=3 Tax=Clostridiales RepID=C6LFT8_9FIRM Length = 238 Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 61/193 (31%), Gaps = 22/193 (11%) Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 + LS +E+A D + + + V + TL + + F V L GM +G+ Sbjct: 8 YEESTGEPSLSGFLEEVALVADIDSLDENES--RVVLMTLHSAKGLEFPNVYLTGMEEGL 65 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 +P + GFD D +++R L + A + L ++ + Sbjct: 66 FPSHV---GFD--------EDPDALEEERRLCYVGITRAMKHLTLTCARMRMTRGETHMS 114 Query: 745 --SVLVQELIDYI-------GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ 795 S ++E+ + G + A + + F + + Sbjct: 115 AMSRFLREIPQELLETKKKTAAEETAGGTNGTKSAWKKPEPPADSPYMQAKRAFRSKAFD 174 Query: 796 PGERQSYAREWLP 808 + + L Sbjct: 175 ANAFKVTKADHLD 187 >UniRef50_Q6KHF3 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mobile RepID=Q6KHF3_MYCMO Length = 742 Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 69/458 (15%), Positives = 149/458 (32%), Gaps = 77/458 (16%) Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQRE-----------VE-- 387 I L + +I E + K+ +SSI + + E E Sbjct: 294 QIFHLNKNYRSNKSIIEAVNNLMKKNNTSFESSIKEMEAQNLEEEKIVYQQAFSTDAEAR 353 Query: 388 -VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI-SDRRAR 445 V+H + L+ + + +DI + Y+ F + + I D + Sbjct: 354 WVVHK--INKLKRNK-VQLKDIAIFYRS-SFYT----KSFEDELEKAEINFQILDDNKFY 405 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 + + + L L D S L +L+VP + + + E Sbjct: 406 ERDEIKDCISFLRVLHDG--SSTTFLRILNVP--------NRDVSVTFEKKLLEY----- 450 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 ++ E A L + + E S + ++ L+ L Sbjct: 451 --AESRNENIYDA--------------LINLFKDTKKEVTSKMKLQWNTKNKTILLN-LV 493 Query: 566 SLLMQLNIWRRGLAQE---RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 +L+ +R L + + L +L + + D I + +I Sbjct: 494 NLINSFRKYRNALKKYPIYKSLHGFLEEVKYY--DYLKDDDAGSDKEKNILELLNSIK-- 549 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + L+ +E+ L + V++ + + + FK V ++G+++ Sbjct: 550 -IWENANRNKNLADYLEEI--SLISSKYKSPLSKNSVSLISAIHSKGTQFKNVFIVGLSE 606 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS----YIGRSIQD 738 ++P + + + K G D++R LF AL A ++++S + ++ Sbjct: 607 YIWPNIKS------IEELEKTGSSDLIDNERRLFYIALTRAVDRIFLSDSQGFFNSDLKY 660 Query: 739 NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 ++ PS + E+ + Q + ESE + Sbjct: 661 --KKSPSRFLNEIGIDLQQFTSNLSVDPNVNQESELEI 696 >UniRef50_A8NTH7 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NTH7_COPC7 Length = 511 Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 79/269 (29%), Gaps = 30/269 (11%) Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 L L+ + ++ E +++++ F + E + A + +I E Sbjct: 7 LWKLVELVQYEEHLKKTQQDWETRWENVKELIS--FAKEIEEQMAKDREAARASGVIDEL 64 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 + D PL + + S+ V I T + + + VV + + Sbjct: 65 ---EVEDTTPLRQFLQASMLSSEGDNESEEDANDKVTITTCHSAKGLEWPVVFIPSADSS 121 Query: 684 VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SE 741 YP + D++R L A A+ LY++ + Sbjct: 122 TYPFIRSED----------------EDEERRLLYVACTRAKSMLYLTRTTSRKVAGDVKQ 165 Query: 742 RFPSVLVQELIDYIGQSH-------YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 + S + ++D + +LP E + + + + + + Sbjct: 166 KQLSKFIANILDKNHKDGKRATFIQHLPHFEEEDREIISSVLGRPTPEDNKVQEMLGEFL 225 Query: 795 QPGERQSYAREWLPAASQAGKAHSEFVQP 823 + G Y W PA+ Sbjct: 226 RLGREVPYNIVWRPASQNDPSPQPSVQHS 254 >UniRef50_B9WE90 ATP-dependent DNA helicase, putative n=1 Tax=Candida dubliniensis CD36 RepID=B9WE90_CANDC Length = 859 Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 61/472 (12%), Positives = 144/472 (30%), Gaps = 83/472 (17%) Query: 371 DSSIT-FHVC-HSPQREVEVLHDRLLAMLEE-DPTLTPRDIIVMVADIDSYSPFIQAVFG 427 D SI + C S Q E + + ++ +L + + +DI V+ +Y Sbjct: 351 DFSIKPVYSCLKSAQEEAKWIVYQISHLLSLPNSAVQGKDIAVLYR--AAYQ---SRALE 405 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + LPY + RA + A + L + V+ L+ P + + Sbjct: 406 DELVKKGLPYKMIRGRAFWDRQEVIAIMDYLKVCSDENEQAAVIRTLNYP----KRGLGP 461 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + + L + + + A + L M + + + Sbjct: 462 KTVESLGKIIEK-----------------QANQGKSVHQCLLAMTKKSGEPKIKLTIKQL 504 Query: 548 LPYDESSGLIAELVGHLASLL----MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 +E ++ ++ L + ++ + L + E L F D Sbjct: 505 QSVEEYYSMVTKVKSKLDEMKNCPDEDISNHAKELF--DLIYEKSK-----LKQEFENDE 557 Query: 604 ETEAAMTLIE------------QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 ++ + + E + I + ++V + + + Sbjct: 558 DSSKRLNVEEVGNLLVQFKPKDEILPDYIDGSGDVEEEESVDDRNFLARFIESVGLYETN 617 Query: 652 QRFLAGP---------------VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 +++ T+ + + + VV + G+++G+ P GF + Sbjct: 618 DEVENNKSDSNGNDKAKEEKSCISLSTIHGSKGLEWPVVFVQGLSEGLLPA-----GFSM 672 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP----SVLVQELI 752 + + +++R F A+ + LYIS S R S ++ L Sbjct: 673 RNSFNDNDEN--LNEERRCFYVAVTRTKVLLYISSYTESQSKAFYRQALDQESRFIEPLK 730 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 + S A + +++ + L+ D + ++S+ R Sbjct: 731 KSLAHS-----QLAFSEEKNLRALYELLSKPFPTENLDWTQFYETYKKSFRR 777 >UniRef50_B7GPZ7 UvrD/REP helicase n=4 Tax=Bifidobacterium longum RepID=B7GPZ7_BIFLI Length = 524 Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 15/113 (13%) Query: 638 RDELAQRLDQERISQRFLAG-PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + L + + + V I T+ + + FK V L+G ++G+ P G L Sbjct: 425 KRALLEAMGLDATGLAANDDPGVTISTIHASKGLEFKHVFLIGCSEGLLPYGSPETGDAL 484 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE-RFPSVLV 748 +++R L + A+ L++SY ++ R PS + Sbjct: 485 -------------EEERRLMYVGITRAEDSLHLSYARTKDGYGAQHRRPSRFL 524 >UniRef50_D1XU37 UvrD/REP helicase n=3 Tax=Actinomycetales RepID=D1XU37_9ACTO Length = 1164 Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 76/484 (15%), Positives = 133/484 (27%), Gaps = 51/484 (10%) Query: 341 DILELEN-RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 +L L N A + E + P D ++ + + E++ L D L ++ Sbjct: 358 RLLHLANGLADPLRAMHEGVEALRPAPGAERDGTVRCALLRTHAEEIDWLGDSLAHLVRT 417 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 P +I V+ + P IQA A DR +P + P + +++ Sbjct: 418 --GTPPGEIAVLCRTAGDF-PRIQA----ALVDRDVPVEVVGLSGLLHLPEVADLVAVCE 470 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + + ++ LL P R+ I L L + R + + + P Sbjct: 471 VLQDPGANASLVRLLTGP----RWRIGPRDLALLGR-----RARLLVHHASPDDDTDPDR 521 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 G+ + ++ S D+ AE A L +L RR LA Sbjct: 522 RLAEAVEGVDPAEVISLADALDTFLDSGGHQDDQLPFSAEARIRYARLATELRELRRSLA 581 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA-EGLGAQYGDAVPLSLLR 638 + L AA + + A L Sbjct: 582 DPLMDVLHRVLSTTGLEVELSASPHALAARR--RETLANFLDVAAGFAAVDGEATLLAFL 639 Query: 639 DELAQRLDQERISQRFLAGP---VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL--- 692 L E+ L G V + T + + + VV + G+ G +P + Sbjct: 640 GFLRTAAQYEKGLDNALPGGENTVKVLTAHKSKGLEWDVVAVPGLVTGQFPSTRSREAWT 699 Query: 693 ------GFDLMSQKPKRGDRSRRD-----------------DDRYLFLEALISAQQKLYI 729 L D D ++ L ++ L Sbjct: 700 AQSKVLPHALRGDAATLPDVCSWDAKGLKAFKDEMTAHQHTEELRLGYVTFTRPRRLLLG 759 Query: 730 SYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG--DEALNCDESEARVKAHLTCLHTRM 787 S R PS + L D+ H + DE ++ + Sbjct: 760 SGHWWGPSQKKPRGPSAFLDALYDHCAAGHGEIEVWADEPGPDEENPVLREREAEQAWPL 819 Query: 788 PFDP 791 P D Sbjct: 820 PLDE 823 >UniRef50_D1J8P0 ATP-dependent helicase n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J8P0_MYCHP Length = 745 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 48/408 (11%), Positives = 127/408 (31%), Gaps = 75/408 (18%) Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + + +I F+ + + E + ++ + + + ++I ++ Sbjct: 316 KLRLEKKLFTENEEGENIEFYCGFNDEAEARWIATKISEL--KRNRVQLKNIAILYR--- 370 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + R + + + + + + F S+ + E+V L Sbjct: 371 -----------TNSCSRAI-----EEALIKENTIYKLFGSI-----KFYQREEVKDALAY 409 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 + + LR I+ + + + + L Y Sbjct: 410 LRVIH----DGSEISLLR----------IINKPSRKIGNVTIEKLLSASKKYNLGLFEYL 455 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER---PLEEWLPVCRD 593 + + + SG + + +LA+ + ++ RR + ++E + Sbjct: 456 ----ETHFNQIQKELHISG---DTLKNLANFINEIRWARRAIQTNAIHLTIKELIVNKIK 508 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIA------EGLGAQYGDAVPLSLLRDELAQRLDQ 647 + + E E + +AI +G +Y + L RD Sbjct: 509 YFDEIKNSEEEYENKIDNFNSLIEAIAEWEKKNPQGSIDEYLQEITLITDRDVEDDAASF 568 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP-----RQLAPLGFDLMSQKPK 702 V++ T+ + + F V + + + ++P F ++ K Sbjct: 569 -----------VSLMTVHNSKGLEFDYVFVACLAENIFPLKRAISISPQDDFTFLNSKNF 617 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 + + +++R L A+ A+++L +S+ S+ N S + E Sbjct: 618 KENIEGLEEERRLAYVAMTRAKKRLMLSF---SVGRNGINRKSRFLSE 662 >UniRef50_C0W0T5 ATP-dependent DNA helicase (UvrD/REP) n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W0T5_9ACTO Length = 686 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 43/326 (13%), Positives = 116/326 (35%), Gaps = 35/326 (10%) Query: 477 PVLAAR-FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 P + R F+ E + +V + I G +++ L + L+ + + Y Sbjct: 329 PAVNFRSFETDEAEATEVASYVKQL-ISEGTKPEDIAILFRTNAQSEAFENALSELGISY 387 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 ++ + ++ + +L R + + ++ + +D++ Sbjct: 388 TVKGGERFFERPEIRQAVGT------------IRRLGELSRKVLEPGS-QDLIQTIKDVV 434 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 + E A + ++W+++ A + A + ++ EL +R + + Sbjct: 435 GPLGWAE-EAPKAAGAVRERWESLDALVVLAYAKQHLTIAEFARELDERANAQ---LAPE 490 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 V + +L + + ++ V L G+++G+ P +A + ++++ L Sbjct: 491 LASVTLSSLHAAKGLEWETVILAGISEGLVPISMAET-------------PAEIEEEKRL 537 Query: 716 FLEALISAQQKLYISYIGRSIQDN-SERFPSVLVQE-LIDYIGQSHYLPGDEALNCDESE 773 + A+ +L I+Y +R S + + + GQ N +S+ Sbjct: 538 LYVGVTRARTRLLITYARSRGAGRVQKRRVSRFLSQMWPELPGQQSGTAPGRRTNVAKSK 597 Query: 774 ARVKAHLTCLHTRMPFDP-QNYQPGE 798 A ++ F+ + ++ E Sbjct: 598 KTAAAEELTELEKIIFEALREWRKDE 623 >UniRef50_UPI0001C352F6 UvrD/REP helicase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C352F6 Length = 565 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 57/393 (14%), Positives = 111/393 (28%), Gaps = 84/393 (21%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I ++ +E L DR+ + + + +I + + S S ++ VF Sbjct: 129 IVVKNHYNSFQEACYLADRICEL--QKQGIPFDEIAIFYR-LQSQSKVMEDVFSKNE--- 182 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR--FDITEEGLR 491 +PY ++ + P LE + LL L P A F ++ Sbjct: 183 -IPYEVAVKTGIHEIPALEWLLRLL-------------RFLADPADRAAAVFVLSSRE-- 226 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 G+ GI +L A W G G ++ P Sbjct: 227 --------YGV--GISAKKAEKL---AEESCAWVCGRKE-------AQENGSEKAAAP-- 264 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE-TEAAMT 610 L ++ + R A+ + L+ P+A Sbjct: 265 --------------GLFERMVSFARNGAEIEDTNGFYEYFD--LDCSLKPNASSYGEDKA 308 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP-----VNICTLM 665 + + A + L + + L V + TL Sbjct: 309 NVCHFLDRMFAFMKAKGFSLPEGLREFLN--SAALYGTSRELLPETDGAGENRVKMMTLH 366 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + F V ++G+N G+ P + L D++R LF + A+ Sbjct: 367 ASKGLEFSHVFIIGVNYGLIPLRTKGL--------------DSEDEERRLFFVGITRARN 412 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 L +S+ S ++ + + + Sbjct: 413 YLELSWYTNPDIFGVMAGESRYIRMIPSELVKG 445 >UniRef50_Q72AD4 Putative uncharacterized protein n=3 Tax=Desulfovibrio vulgaris RepID=Q72AD4_DESVH Length = 984 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 73/484 (15%), Positives = 154/484 (31%), Gaps = 55/484 (11%) Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 R+ G + L + + +L L L L+ W R E Sbjct: 407 DRLRGGTRFADLATVMEEALAETDVAPGTQDLCRTLLDLC--LSRWERASTPAALAEAVG 464 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA-VPLSLLRDELAQRLDQ 647 +C +L + + Q +I ++ P +L L + + Sbjct: 465 FLCAVLLERGGDLWERFPIDAECLFRLMQRVIPALRESELAATAFPQDVLFTILRETVRA 524 Query: 648 ERISQRF-LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR 706 ER+ G + + ++ R + F+ V +L D P S +P+ G Sbjct: 525 ERVPFEADPIGGLQVLGMLESRLLTFRRVIVLDATDDRLPGAPPNDPLLPDSLRPQVGLP 584 Query: 707 SRRDDDR---YLFLEALISAQQK--LYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 R +R + F L A++ L+ + + RS + ++ S V+E++ + Sbjct: 585 DARRRERITAHNFHRLLAGAEEVNLLWQAGVERSGLLDDKKARSRFVEEML------WHE 638 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFV 821 E + + ++ R + + A Sbjct: 639 ERAAGRLFRPGEGPLGTVTCTVRP--------FESTPRHILKTDAVRDALARF------- 683 Query: 822 QPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT---EPFILEGLSRY 878 V L + P R + + ++ E E D + E L+R+ Sbjct: 684 ------FERPVSPSRLDAYLTCPFRFYHEHLCRLAPPDEVIEGEDPAAVGTLLHEALNRF 737 Query: 879 QINQQLLNALVEQDDAERLFRRFRAA-------GDLPYGAFGEIFW---ETQCQEMQQLA 928 + + ++ D E L R FR + P A + E + + + Sbjct: 738 YAPWRGIEVTRDRLDPEMLERHFRQSLHESGLADRFPADALAMLETAGPERLRRFLARQP 797 Query: 929 DR-VIACRQPGQSMEIDLACNGVQITGWLPQVQPDG----LLRWRPSLLSVAQGMQLWLE 983 DR V+ + + ++++ ++ G L +V G +L ++ L + +W + Sbjct: 798 DRTVVLHLEEAFTADVEVDGRTRRLGGRLDRVDRRGEGAVVLDYKTGSLRTVR-PDVWED 856 Query: 984 HLVY 987 H ++ Sbjct: 857 HGLW 860 >UniRef50_B0SSS8 ATP-dependent DNA helicase PcrA n=6 Tax=Leptospira RepID=B0SSS8_LEPBP Length = 678 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 45/417 (10%), Positives = 125/417 (29%), Gaps = 65/417 (15%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + ++ + E + R+ +L ++ ++I ++ P F +R Sbjct: 318 VEYYETADEREEAIFVAGRIQTLLIKNE-FKGKEIAILFRTNFQSRP-----FEEELRNR 371 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY + + IS L + +L +++ P + I ++ L Sbjct: 372 SIPYKVVGGYNFFDRKEIRDCISYLRYVANPKDDYSLLRIINYP----KRGIGPGTMQKL 427 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + ++ +L L + + D Sbjct: 428 Q------------EEAFTHKLSLYEIFH-----------------------KMIESPDYL 452 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLE-EWLPVCRDMLNAFFLPDAETEA----- 607 + A++ + + ++ +++ A + L + + + ETE Sbjct: 453 PEVKAKVRQEIYQFVEMVDAFKKKFAMSQKLAPVLREMITQIGFEREISMEETEEKVVKA 512 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + + + + + L L ++ + V + T+ Sbjct: 513 RIYNLSELVNMLSFFEEEEGREGKATIFDFLQRL-VLLMEDEPKEDEEDRRVQLLTMHQS 571 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + + +V L+G+ +G+ P + + + D++R L + ++KL Sbjct: 572 KGLEYDLVFLVGLEEGILP-----------NSRVIEEEGEVVDEERRLLYVGMTRPRRKL 620 Query: 728 YISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 Y++ + + PS + EL + + ++ L Sbjct: 621 YLTSARTRRKFGEQIESAPSRFLNELSQDAVLFFPMETKDRDTETKNFLEELDKLKV 677 >UniRef50_B2UU61 Rep helicase, single-stranded DNA-dependent ATPase n=16 Tax=Helicobacter RepID=B2UU61_HELPS Length = 676 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 72/185 (38%), Gaps = 24/185 (12%) Query: 578 LAQERPLEEWLPVCRDMLNAFF------LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 L + P + + +L + F E +++ + A+ + D Sbjct: 495 LYTKAPTHSPSALIKHILESVFFQTFKTRLLKERSKNKDGSYNEFKKLQAQKRFNEKMDL 554 Query: 632 VP-LSLLRDELAQRLDQERISQRFLA--GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + L+ L + L+ I VN+ ++ + + FK V ++ + +G +P Sbjct: 555 LSSLAKNYQNLGRFLNGTLIGSSEATQGEGVNLLSVHASKGLEFKDVYIIDLMEGRFPNH 614 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN---SERFPS 745 LM+ +++R LF A+ A++ L++SY +++N E PS Sbjct: 615 K------LMNTGG------GIEEERRLFYVAITRAKENLWLSYAKNELRENAKPKEHKPS 662 Query: 746 VLVQE 750 V + E Sbjct: 663 VFLYE 667 >UniRef50_B8FXD7 ATP-dependent helicase/nuclease subunit A n=2 Tax=Desulfitobacterium hafniense RepID=ADDA_DESHD Length = 1392 Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats. Identities = 59/463 (12%), Positives = 132/463 (28%), Gaps = 70/463 (15%) Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS 373 L E E+ F D L Q E V E + R + D Sbjct: 531 LRTAEGPIEVHLFDPKAIDLSLG--QKRGAEDAATEVDSPAKGEGEEFEQNREPESGDDE 588 Query: 374 ITFHVCHSPQREVEVLHDRLLAM------------LEEDPTLTPRDIIVMVADIDSYSPF 421 + + + E ++ R+ M L + + DI++++ + S Sbjct: 589 SSLEEAETARIEARLVAARIQKMVLEREFQIHDKELGDYRPVQYADIVILMRSLAS---- 644 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 + +V+ +P ++ +SLL + D+ + A+L P++ Sbjct: 645 VASVYAEEFQKAGIPVYAETNSGYFGTNEVDTVLSLLKIIDNPRLDIPFAAVLRSPLV-- 702 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 + L LR + + + H + + +L + + Sbjct: 703 --GMNGTELGKLRSLLPQGDFYETLVLTFWAGDAHRQEEGHEFYSEIREIL----GKHWE 756 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 Q + E+ + + +L WR ++ L + L + + +L Sbjct: 757 SLPQLEVKVRHILETSPEIKEKVDAFFPKLQEWRHR-SRRTSLADLLWHLYE--DTGYLA 813 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ-----RFLA 656 T A + + + + + L L + Q + Sbjct: 814 YVGTLPAGAQRQANLRVLYDRACRYEATNYRGLFRFLRFLEKFQSQGKDLGNASIVGEKE 873 Query: 657 GPVNICTLMPMRSIPFKVVCLLGM-----------------------------NDGVYPR 687 V T+ + + F VV + G+ N YP Sbjct: 874 NVVRFITVHSSKGLEFPVVFIAGLGKKFNTRSLSSQLLLHSHLGVGIPLIDIENQVRYPS 933 Query: 688 QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 + + K + + ++ + AL +++L++ Sbjct: 934 VIQY------AVKERLW-QEALAEELRILYVALTRGKERLFLF 969 >UniRef50_Q18AN9 ATP-dependent helicase/nuclease subunit A n=7 Tax=Clostridium difficile RepID=ADDA_CLOD6 Length = 1275 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 68/490 (13%), Positives = 150/490 (30%), Gaps = 78/490 (15%) Query: 381 SPQREVEVLHDRLLAMLEEDP-------------TLTP---RDIIVMVADIDSYSPFIQA 424 + Q E ++ + + +++ + P RDI++++ +++P Sbjct: 569 NIQLEARMVGNIIKDLMKVNEDGKIQKVYDKGIDGYRPVEFRDIVILLRATSAWAP---- 624 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 VF + +P ++ +SLL + D+ ++++L P+ F Sbjct: 625 VFADELMNMDIPTYADVGVGYFDTIEIKTILSLLQIIDNPMQDIPLISVLKSPI----FG 680 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 T E L +R ++ + T + G+ + E Sbjct: 681 FTPEDLIDIR--------------VQSKDKIFYEVLKSTAEYD------GFTDSQNENE- 719 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 +P +E + + L + ++ + + W R A+ Sbjct: 720 SEFIPSEECINKSKDFLIKLKEFKEK----SMYMSTDEFI--WYLYTRTGYYAYVGALPG 773 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS--QRFLAGPVNIC 662 + + + ++L + + A V I Sbjct: 774 GSQRQANL-KVLFERAKQFEETSLKGIFNFVNFIEKLKKSSSDMGSAKTLGENANVVRIM 832 Query: 663 TLMPMRSIPFKVVC--LLG--MNDGVY-------------PRQLAPLGFDLMSQKPKRGD 705 ++ + + F VV +G N + P+ + K Sbjct: 833 SIHKSKGLEFPVVICSAMGKNFNTQDFKKSILYHHNLGYGPQFVDYERRISFPSIAKEAL 892 Query: 706 RSR-----RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 +S+ ++ + A A++KL I+ R+IQD+ +R+ S + E +D I Q Sbjct: 893 KSKINIENLSEEMRVLYVAFTRAKEKLIITGSTRNIQDSIKRW-SNGI-ESLDTISQYEI 950 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF 820 L G L+ L+ L + D + Y + W K E Sbjct: 951 LKGKNFLDWIMPCVLRHRDLSNLLEEVGLDAVFNVEHNSKWYGKLWNKNDILVEKKSDEE 1010 Query: 821 VQPLPFTLPE 830 + + L + Sbjct: 1011 KESIEEILEK 1020 >UniRef50_C8WEW4 UvrD/REP helicase n=3 Tax=Zymomonas mobilis RepID=C8WEW4_ZYMMN Length = 1047 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 23/196 (11%), Positives = 70/196 (35%), Gaps = 24/196 (12%) Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT-LIEQQWQAIIA 621 + + + ++ + + L++ L V +++ + EA ++ +Q + + Sbjct: 853 AVKAFIEKIEQ-----SPQETLQDRLIVLKNIATELAQENQGEEAVLSPADREQAYSWLK 907 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 + +++ L E V++ T+ + + F V + G+ Sbjct: 908 IIAEKSGQQ--SHTFFLEQI--ALANEVDFHDQRGDRVSLMTMHASKGLEFSAVFVTGLE 963 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN-- 739 + + + + + + +++ LF AL A+ L++SY + Sbjct: 964 EENF------------NLHHQLDNPTEIAEEKRLFYVALTRARDYLFLSYAKKRFIYGEY 1011 Query: 740 SERFPSVLVQELIDYI 755 ++ + + L D + Sbjct: 1012 QKQTTAAFLNLLKDML 1027 >UniRef50_A0JYL5 UvrD/REP helicase n=4 Tax=Actinomycetales RepID=A0JYL5_ARTS2 Length = 1183 Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 105/719 (14%), Positives = 193/719 (26%), Gaps = 142/719 (19%) Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 R +PY I P + ++ L + S+ ++ LL AR+ I L Sbjct: 477 RGIPYEIVGLGGLLDTPEIVDLVATLRVLADPGRSDSLMRLLA----GARWRIGPADLMA 532 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 R W + R G + E + P + + +W + Sbjct: 533 FRDWSSFLARRRGNPRTDADEADDPDAAV------IESDITDSPSLVEALDWLPREGWTS 586 Query: 553 SSG--LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA--- 607 + G L + L +L +L R + + + L D E A Sbjct: 587 AHGRTLSPAALDRLHALSAELRQLRGFMGDDLT------TLLGEVERAMLLDIEVAARPG 640 Query: 608 -AMTLIEQQWQAIIAEGLGAQYGD-AVPLSLLRDELAQRLDQERI----SQRFLAGPVNI 661 ++ + A G + V + L +E + V + Sbjct: 641 VSIHQARRNLDAFHDAAAGFLHTSHRVDVLAFLAWLEAAATEEGGLDVAAPEVNHEAVQL 700 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR--GDRSR----------- 708 T+ + + + VV + G+N G +P + P GDR+ Sbjct: 701 LTVHASKGLEWDVVFVPGLNAGAFPSSRDSRWSSGSAALPWPLRGDRADLPQWDTDQPDQ 760 Query: 709 ------------------RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 ++R L A A+ L++S S + E Sbjct: 761 KGWLDAEKNFKADVQAHGEAEERRLAYVAYTRAKFVLWVSSAAWVGSRAGMAEMSPFLSE 820 Query: 751 LIDYI-------------------------GQSHYLPGDEALNCDESEARVKAHLTCLHT 785 L + + +E+ + L H Sbjct: 821 LAPLAGIGAGEAETVAAEGSTRGRTEAAAGTAAVVHAASVEESLVPAESPLTQDLELAHW 880 Query: 786 RMPFDPQNY----QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP-----LET 836 P+DP + G R A A E + P T P Sbjct: 881 --PYDPLEGPADPRTGARLRLVPGRRAAMEAAAGRVREALAAGPDTEPAADSDAGEGPRQ 938 Query: 837 LQRFWAH---PVRAFFQMRLQ------VNFRTEDSEIPDTEPFILEGLSRYQINQQLLNA 887 L+ F A+ + R + V+ S F+ G + +L Sbjct: 939 LRSFAANWAKEADLLLERRHRRATVQDVHLPGHISAS----TFVDLGDDPAAVLARLRRP 994 Query: 888 L-VEQDDAERLFRRFRAAGDLPYGAFGEIFWET-------------QCQEMQQLADRVIA 933 + E + R F A + +G G + + ++ + A Sbjct: 995 VPREPGMSARKGTAFHAWVEEHFGKAGMLELDEAPGSDSHIDEAYGLDSMVETFRNSEWA 1054 Query: 934 CRQPGQ-SMEIDLACNGVQITGWLPQVQPD-----GLLRWRPSL------LSVAQGMQLW 981 R P + ++ V + G + V D L+ W+ L V Sbjct: 1055 HRAPAHVEVPVETRIGEVVVRGRIDAVFRDADGGWDLVDWKTGRRPAAGQLKVKAVQLA- 1113 Query: 982 LEHLVYCASGGNGESRL-----FLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPL 1035 + L + G + ++ ++ R P A L ++ G +A L Sbjct: 1114 VYRLAWARLKGVPLDSVRAAFYYVGENQVVR--PHDLGTA-EQLEDIVTAALGGTTALL 1169 >UniRef50_B3DQ57 Superfamily I DNA and RNA helicase n=3 Tax=Bifidobacterium RepID=B3DQ57_BIFLD Length = 401 Score = 79.7 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 14/92 (15%) Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V I T+ + + FK V L+G ++G+ P G L +++R L Sbjct: 323 GVTISTIHASKGLEFKHVFLIGCSEGLLPYGSPETGDAL-------------EEERRLMY 369 Query: 718 EALISAQQKLYISYIGRSIQDN-SERFPSVLV 748 + A+ L++SY R PS + Sbjct: 370 VGITRAEDSLHLSYARTKDGYGVQRRRPSRFL 401 >UniRef50_A4F8N5 Probable ATP-dependent DNA helicase n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4F8N5_SACEN Length = 1078 Score = 79.7 bits (195), Expect = 7e-13, Method: Composition-based stats. Identities = 100/766 (13%), Positives = 195/766 (25%), Gaps = 128/766 (16%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 ++L + N A + + + I + ++E + + DR+ A Sbjct: 355 PEVLRVANAVSAPLREAGLEVEELRAKDGAEAGDIRVALADDVRQERDWVADRIAAQWHA 414 Query: 400 --DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 D P V+V A +A DR LP + + +S Sbjct: 415 ALDENGRPPTAAVLVR-----RRADMADLAAALRDRGLPVEVVGLGGLLDEAEVRDLVSA 469 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L + + LL +R+ + + L E G R P Sbjct: 470 LRMLVDPLAGTAAMRLL----TGSRWRLGAADIAALWDRARELGER---------AFGAP 516 Query: 518 ATGQHTWRFGLTRMLLGYAME-----SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 + T + L G E A + + Y E +G +L Sbjct: 517 ESEDPT--AAVAAALPGEHAEQAGLVDALDDPGNAERYSEPGYQRIRRLGR------ELA 568 Query: 573 IWRRGLAQERP--LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 RR L Q P + + + + P + A Sbjct: 569 NLRRRLEQPLPELVADVERTLLLDIESLSRPGGAGRIHLDAFADVVTDFATASPSATLPA 628 Query: 631 AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 + + L+ V + T+ + + ++VV L + V+P + Sbjct: 629 LLDYLAAAERAEDGLE--PGEVEVADDRVQVLTVHAAKGLEWEVVALPHLVRDVFPGKRK 686 Query: 691 P---------------------LGFDL--------------MSQKPKRGDRSRRDDDRYL 715 DL + + R ++R L Sbjct: 687 ASSWLRAVTELPARLRGDAQDLPRLDLDRLQGMDRKEIVEALEAHDDEFEDRRLTEERRL 746 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 A+ +++ L +S + + + PS + +L + + ++ +A Sbjct: 747 LYVAVTRSERSLLLSGHWWAEGGDKPKGPSDFLLQLAEVVKSPDVGVVEQWSPQPPEDAP 806 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT-------- 827 P DP + A L A A + + Sbjct: 807 NPLAEAVRSAEWPVDPLGTRRDAVAEGANLVLAALDAVDSAAPDEEDEDGWARDVDVLLA 866 Query: 828 -------------LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 LPE + + L RL+ + + Sbjct: 867 ERAAAARRRDQVRLPEHLSVSQLVELADDADA--LARRLRRPLPYPPNPMTRRGTAFHSW 924 Query: 875 LSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC 934 L + LL+ A+ P+ + + LA Sbjct: 925 LEHRFTSTALLDFDELPGAADE--------SATPHDDLEML-------QQAFLAGSWAER 969 Query: 935 RQPGQSMEIDLACNGVQITGWLPQVQPD-----GLLRWRPSLLSVAQGMQLW-----LEH 984 + + GV + G + V D ++ W+ + ++ Sbjct: 970 TPHRVEVPFETQVEGVVVRGRMDAVFADSDGGWTVVDWKTGAVPAGDQVRALSVQLAAYR 1029 Query: 985 LVYCASGGNGESR-----LFLRKDGEWRFPPLAAEQALHYLSQLIE 1025 L + A G + ++R D R P A L +L+ Sbjct: 1030 LAWSALSGAPLEKVRAAFHYVRHDRTLR--PADLLDAEG-LRELLR 1072 >UniRef50_C6W379 UvrD/REP helicase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W379_DYAFD Length = 932 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 48/323 (14%), Positives = 95/323 (29%), Gaps = 24/323 (7%) Query: 476 VPVLAARFDITEEGLR-YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + LR W +GI ++ ++ + + + Sbjct: 360 TDPNEPERGLDYSDFAILLRTWSKTAGIVNELEKLDIPYITAGVNQLFSVNEVKAAYGIF 419 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 + + + + + + L + + + W + + Sbjct: 420 QYLNKSISAEELLQLWIQIRNSNFASNNLLLGIEYLNSKFPEKQVDRNGKAIWAFSLQQI 479 Query: 595 LNAFFLPDAETEAAMT---------LIEQQWQAIIAEGLGAQYGDAVP-------LSLLR 638 F E A ++ +I + + +VP L +R Sbjct: 480 YWDFLEKSQINEEAFQSQHIAEIVMYNLGKFSQVINDFEEIYFNSSVPSYHLFSFLQFIR 539 Query: 639 DELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 A + ++ F A V I T+ + + F VV + G+N P + + Sbjct: 540 YAAADHYPEGWLNNPFRAPNAVQIMTIHQAKGLEFPVVFIPGLNKNYMPAKKVGGLTEWH 599 Query: 698 SQKPKRGDRSRR-----DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 P +R +D+R LF A+ AQ+ L+IS + R S V EL Sbjct: 600 FLNPALIKNQQRYIGSEEDERRLFYVAITRAQKFLFISR-APDENNQLYRKASQFVSELA 658 Query: 753 DYIGQSHYLPGDEALNCDESEAR 775 + LP E E+ + Sbjct: 659 ESDAIVTNLPPFEKNLKIEASPK 681 >UniRef50_A8Q3F1 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q3F1_MALGO Length = 876 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 67/506 (13%), Positives = 150/506 (29%), Gaps = 82/506 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTL-TPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 + H E + +L ++ L T DI +++ P +A Sbjct: 329 VVLRAFHDADEEARYIALEILRHVQCTGGLLTFADISILLRFNAQSRPL-----EAALQR 383 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY I ++ ++ L + ++ + VL +L+VP + I + + Sbjct: 384 HGIPYRILGGLRFFDRAEIKDLLAYLVVTENPAYTPGVLRILNVP----KRGIGTKSV-- 437 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L Q L R+ A +SV + + Sbjct: 438 ------------------QALLAAAQAEQVPLLTYLERVSPAAAYGMRPAVVKSVSQFVQ 479 Query: 553 SSGLIAELVGH------LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD---- 602 + + + L L+++L + L + + +++++ D Sbjct: 480 TIQELRNAAENGSSVADLLHLVLKLTRYEEHLRPDPDFDSRWENVQELVSFASSIDLPPQ 539 Query: 603 ------AETEAAMTLIEQQ---------WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 E + + I+ + PLS + + Sbjct: 540 SPPSHHGEPVRKRARVSENRPEDANEFSVHNIVDNVHADEEVATTPLSAFLES-SALASD 598 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + + V I T + + + VV L DG+YP + Sbjct: 599 LGVQEGSPPAMVTISTCHAAKGLEWPVVFLPASEDGIYP-------------FYRSTTPE 645 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRS--IQDNSERFPSVLVQELIDYIGQSHYLPGDE 765 R ++R L+ A+ AQ L +S+ R + + S R S + L+ H + Sbjct: 646 ERREERRLYYVAMTRAQTNLILSWSHRRLVMSEWSSRQLSPFLAPLVSKAHGGHVPLDKK 705 Query: 766 ALNCDE----SEARVKAHLTCLHTRMPFDPQNYQPGERQSYA-------REWLPAASQAG 814 ++ + S A L + + P + + A +++ ++Q Sbjct: 706 PMSDESWSHVSPPFTHAWLGVTASILSRSPITLERLNELAEAFATSPTGQQYRRISAQIP 765 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRF 840 P ++ ++++ Sbjct: 766 SGTPSAPWPSTLPRTDSFTNAEVRKW 791 >UniRef50_Q5HY14 DNA helicase II UvrD n=2 Tax=Gluconobacter oxydans RepID=Q5HY14_GLUOX Length = 682 Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 45/385 (11%), Positives = 98/385 (25%), Gaps = 90/385 (23%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + Q E + + + D+ V+ + + + Sbjct: 347 VDILRHTGSQDEASGIAAEIGRR--ALEGVPYEDMAVLYR-----FNHLSRLLEESLLRA 399 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSL---PDSRFVSEDVLALLDVPVLAARFDITEEGL 490 +PY + + A V++ ++ L L P R E +++ P I + + Sbjct: 400 RIPYELVNDTAFWQRGVVKDALAFLRLTCFPYERQSDEAFRRIVNQPA----RGIGAKAM 455 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 Q +E I + R Sbjct: 456 ATFEQVADEEAI--------------------SLYEAAER-------------------- 475 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE-EWLPVCRDMLNA--FFLPDAETEA 607 G + L L + L R E R ++ + Sbjct: 476 -TVQGRTGKAADKLRGFLDVI------LKGARSDEPSLGERLRVLVEESGYLAMHHAAGE 528 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + +++ S + + G V + T+ Sbjct: 529 DGRTALENLHELLSLANE--------FSSVEELFDHAALGSESRDDDSVGRVKLMTIHGS 580 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F V L+G D ++P + ++R L AL +Q++ Sbjct: 581 KGLEFGHVFLIGWEDTLFPSRTNIDP----------------AEERRLAYVALTRGRQRV 624 Query: 728 YISYIGRSIQDNSERFPSVLVQELI 752 +S+ + + PS + E+ Sbjct: 625 SVSWC--EFRRGEQANPSCFIDEIP 647 >UniRef50_A3DH19 ATP-dependent helicase/nuclease subunit A n=7 Tax=Clostridium RepID=ADDA_CLOTH Length = 1251 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 61/445 (13%), Positives = 130/445 (29%), Gaps = 107/445 (24%) Query: 336 HNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA 395 H IQ++ + + EE ++D + + SI C E ++ R+L Sbjct: 534 HLIQTE--DEDKNFTFENEGEEGRQADEGEEDEEMLDSIQ---C-----EARLVGRRILE 583 Query: 396 MLEEDPTLTP----------------RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 +++ D RD+++++ +++ VF + +P Sbjct: 584 LMKPDENGRYFSVFDKAKNEYRRVEYRDVVILLRTTRNWA----EVFVDELSVMGIPVFA 639 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 ++ +SLL + D+ +L++L P++ T + L LR Sbjct: 640 DTGTGFFKTVEVQVMLSLLQIIDNPLQDIPLLSVLRSPIV----GFTTDELAELR----- 690 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 + L ++ + E Sbjct: 691 -----------------LVDKKALLFDALKKL---------------------AESGQGE 712 Query: 560 LVGHLASLLMQLNIWRR---GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 G ++ L L WR ++ +R L W + E + Sbjct: 713 AAGKASAFLENLQKWREMSLYMSTDRLL--WQLYNDTGYYSIVGAMPAGEQRQANLR-IL 769 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL--AGPVNICTLMPMRSIPFKV 674 + Y D+L ++ V I ++ + + F V Sbjct: 770 YERARQFEETSYKGLFNFINFIDKLKSSRGDMGSAKILSENDNVVRIMSIHKSKGLEFPV 829 Query: 675 VCLLG---------MNDGVYPRQLAPLGFDLMSQKPKRGDRS-------------RRDDD 712 V + G MN + G D++ K + S ++ Sbjct: 830 VIVAGCGKKFNLQDMNKSILLHHELGFGPDVVDHKLRLSWPSVAKQAIREKIKAETLSEE 889 Query: 713 RYLFLEALISAQQKLYISYIGRSIQ 737 + AL A++KL I+ ++++ Sbjct: 890 MRILYVALTRAREKLVITGAVKNVR 914 >UniRef50_A5DGH7 Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DGH7_PICGU Length = 830 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 51/361 (14%), Positives = 110/361 (30%), Gaps = 51/361 (14%) Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 L DI ++ +Y +AV R +PY + +A + F+ L Sbjct: 359 GQPLRHEDIAILFR--AAYQT--RAV-EQELTRRGIPYLMLRGKAFWDRKEVVVFMDYLR 413 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + + ++ L+ P + I E+ ++ + + S ++V + + Sbjct: 414 VVSNESDRLALVRTLNYP----KRGIGEKAMKLIENELQNS-------ANSVHQTLVAFC 462 Query: 520 GQHTWRFGLTRML---LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 L LG + + +D+S S L + Sbjct: 463 KSGQLSSKTKEGLSAYLGLIERCREHLDHYEMTHDKSLLERLSSELLRDSGLQT--EFED 520 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP--L 634 + + E D + + E + + Q D Sbjct: 521 DSNKMLNITEVQRQLLDF-------EPQDEQ--------IELFVGGSENDQADDPFNHIQ 565 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 ++ ++ S+ + + T+ + + + V + G+++GV P GF Sbjct: 566 KFVQAIGLYESEESAQSKEKSTSRITLSTIHGSKGLEWHTVFVPGLSEGVLPA-----GF 620 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI-SYIGRSIQDN-SERFP-SVLVQEL 751 + + D ++R F A A+ LYI SYI + S + ++ Sbjct: 621 AIADNSEQSAD-----EERRCFYVATTRAKTLLYISSYIEEEGKWGRKPIEAVSRFLTKI 675 Query: 752 I 752 Sbjct: 676 K 676 >UniRef50_C5CB78 DNA/RNA helicase, superfamily I n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5CB78_MICLC Length = 1176 Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 96/717 (13%), Positives = 185/717 (25%), Gaps = 126/717 (17%) Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V+ + P + A LPY + + P + +++L + S+ Sbjct: 463 AVLCRTRAQFGPVLDA-----LDAAGLPYEVLGLSGLLALPEVAEVLAVLHVLADPTRSD 517 Query: 469 DVLALLDVPVLAARFDITEEGLRYL-RQWVNESGIRWGIDDDNVRELELPATGQHTWRF- 526 ++ LL P R+ I L L + S +R G + A R Sbjct: 518 QLVRLLTGP----RWRIGVADLEVLQERARFVSRLRAGRAAGGREDPAGDAPDVAPVRDV 573 Query: 527 -------GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 + ++ +W G E + L ++ +L Sbjct: 574 SPEEDADAAALLEALDSLPGEGTDWVG----SRGRGFSPEGLARLRAVNAELRRLFTRTG 629 Query: 580 Q--ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 + + E + + P AA + +Q + A L+ Sbjct: 630 EDPADLIAEVIRETGLDVEVALRPGVSAAAARRHL-NAFQDAARDFGA--GTTATDLTAF 686 Query: 638 RDELAQRLDQERI----SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL---- 689 L+ E + G V + T + + + VV + G+ +G +P Sbjct: 687 LAWTESVLEHEDGLGVENAEPTPGLVQVLTAHASKGLEWDVVAVPGLQEGTFPSTRADRW 746 Query: 690 ----------------------------------APLGFDLMSQKPKRGDRSRRD----- 710 G S+ + G+ Sbjct: 747 TSPGAGALPWPLRGDRASLPQWDGSWAQDQRDWVQSAGTKYSSKAAQEGNPDPYAVAVAA 806 Query: 711 ----DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE---LIDYIGQSHYLPG 763 ++R L A A+ L++S + S ++E L + P Sbjct: 807 HAEREERRLAYVAYTRARSALWLSTSLFKGVNKEPLPASAFLEEVAGLAGQVPGVALGPA 866 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFD-PQNYQPGERQSYARE-WLPAASQAGKAHSEFV 821 + E+ L P D P+ + E W P ++ Sbjct: 867 PAEDDLPEANPAAGRTLVARWPFDPLDGPEAFVADPEDPEDEERWQPLPRRSRARREAVE 926 Query: 822 QPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG---LSRY 878 A V R V ++ +P+ L G Sbjct: 927 AAAAAVHAADPAALADDPELARQVDWVLLRRRDVAGTGGETALPEHVSVSLYGELAADPQ 986 Query: 879 QINQQL--------LNALVEQDDAERLF-RRFRAAGDLPY--GAFGEIFWETQCQEMQQL 927 + +QL +A RF A G L W + ++ + Sbjct: 987 AVAEQLRRPLPRPPAHAARRGTAFHAWLEERFGATGMLDIDSAEDAADLWVDEALDLGPM 1046 Query: 928 AD-----RVIACRQPGQSMEIDLACNGVQITGWLPQVQPDG--------------LLRWR 968 + R ++ G+ + G + + G L+ W+ Sbjct: 1047 QEWFRSSRWAERTPAFVEAPVETTVGGITLRGRVDAIYRSGGDPRLPFDPEADWELVDWK 1106 Query: 969 PSLL-SVAQG----MQLWLEHLVYCASGGNGESRL-----FLRKDGEWRFPPLAAEQ 1015 + +QL + L + G R+ ++ E FP L E+ Sbjct: 1107 TGAVPRGRDLELKSLQLAVYRLAWSRLHGIPLERIGASFVYVAHGQERSFPDLPGEE 1163 >UniRef50_D2VUP5 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VUP5_NAEGR Length = 705 Score = 78.9 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 53/397 (13%), Positives = 121/397 (30%), Gaps = 85/397 (21%) Query: 340 SDILELEN-----RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 + IL+L +++ + S +IT + + E + + +++ Sbjct: 367 ATILKLRRNYRSMKSIVLASNRFMKTSTENSIETDSQDAITLNNFSTRDGEFQYIANQI- 425 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 + + ++ DI +++ + S ++ +P + + + Sbjct: 426 -QILNNKGVSYNDIAILMR-----RSTNTSELESILKNKKIPISKNAKDDT------RVM 473 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW-GIDDDNVRE 513 ++L+ L + +I +E +W+ + I + GI + + + Sbjct: 474 LNLMKL------------------ICDGVEIKDEKFTKSMKWIIKHFIYFKGIGEKSFEK 515 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 Q T S + + P + + +N Sbjct: 516 YLQYLKDQET--------------PSTKVPTKGKAP-------KKDKLEKFIRFFTVINE 554 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 GLA L+ + + F LI D + Sbjct: 555 LAAGLANTTFLK-----LAETIQKKF------NWDDPLIIDGL----------GLNDELV 593 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 S L D L + E + ++ICT+ + +K V + + DGV P Sbjct: 594 TSDLIDSLIS-FNDETYNNSSDGKGIHICTVHRAKGREWKHVFVPEVQDGVMPLIKKSDP 652 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 L Q+ ++ +F A+ A++ LY++ Sbjct: 653 IQLKKQQIVH-----EGEEDRIFYVAITRAKEWLYLT 684 >UniRef50_Q1MQG7 Uncharacterized conserved protein n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MQG7_LAWIP Length = 1102 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 6/106 (5%) Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR-RDDDRY 714 + V I TL + + FKV+ L + +G+ P L+ + K + S +++ Sbjct: 984 SEQVQIMTLHASKGLEFKVIFLPALEEGLLPYLGTQR---LLQKAEKEYENSETIAEEKR 1040 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQS 758 L + A+ L++SY + + PS + L D +S Sbjct: 1041 LLYVGMTRAKDALFLSYSEQRTIFGNVLRLAPSRFLVNLPDMFQRS 1086 >UniRef50_Q6AJ72 Probable ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ72_DESPS Length = 733 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 72/246 (29%), Gaps = 31/246 (12%) Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG--HLASLLMQLNIW 574 + L R+ A + + P+ A +A L Sbjct: 420 DNLSWNRVLLQLDRIGPKTAQKITTTIVPTFDPFLSLKNYPASKASVDIIAGLADLFREL 479 Query: 575 RRGLAQERPLEEW-LPVCRDMLNAFFLPD-AETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 R L E L + + D + E + + A Y Sbjct: 480 RVTERTPAALYELVLNYYTPLFERLYSDDYPKREKDLEHFKGVI---------AGYD--- 527 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L D+ + + + T+ + + F V ++G+ +G +P Sbjct: 528 DLQKFIDDTTLDPPAPTADKTPDGKRMVLSTIHSSKGLEFDAVFVMGLAEGRFPHANT-- 585 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP---SVLVQ 749 G + +++R L A A++ LY++Y + + + + S + Sbjct: 586 ----------VGFGPQWEEERRLLYVAATRARKHLYLTYPRQMMTPDRQFKRVGMSPYLV 635 Query: 750 ELIDYI 755 EL D + Sbjct: 636 ELKDML 641 >UniRef50_B6WV09 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WV09_9DELT Length = 1234 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 2/131 (1%) Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 L E R + V I TL + + F+ V L G+ +G+ P + L + Sbjct: 1102 GLQHEAELIRARSEQVQILTLHASKGLEFQAVFLPGLEEGLLPMRRDLLLENPDDDMSPA 1161 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYL 761 +R +++R LF L A + LY+S+ E PS + + D+ QS Sbjct: 1162 AQAARLEEERRLFYVGLTRAARALYVSHSAGRRLFGRELALAPSSFLPLVRDFCRQSTLA 1221 Query: 762 PGDEALNCDES 772 +A+ S Sbjct: 1222 RHTKAVREHLS 1232 >UniRef50_C6WMF4 UvrD/REP helicase n=3 Tax=Actinomycetales RepID=C6WMF4_ACTMD Length = 876 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 49/121 (40%), Gaps = 13/121 (10%) Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIP 671 ++W++++A A+ + LD +Q V + +L + + Sbjct: 625 RERWESLLALVELAEEFASAVPDADLRAFVTELDVRAEAQHPPTVEGVTLASLHAAKGLE 684 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 + V L+G+ DG P Q A GD + +++R L + A++ L++S+ Sbjct: 685 WDAVFLVGLVDGTMPIQHAD------------GDEAAVEEERRLLYVGVTRAREHLWLSW 732 Query: 732 I 732 Sbjct: 733 A 733 >UniRef50_C8Q3Z5 UvrD/REP helicase n=2 Tax=Proteobacteria RepID=C8Q3Z5_9ENTR Length = 1144 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 90/607 (14%), Positives = 178/607 (29%), Gaps = 123/607 (20%) Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 L D + M RD V+ + S G +P + Sbjct: 542 ALADAIQEM--RGAGYPYRDQAVLCTGNEKLSEI-----GQQLERLGIPVLF--LGSVFE 592 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID 507 P ++ ++SLLSL R + ++ + F ++ E + + + E WG Sbjct: 593 RPEIKDWLSLLSLLVDR-RAMGLVRM----ACLPEFTMSLEDVGNILACLREED-DWGDW 646 Query: 508 DDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567 D V + ++ A G+ L R+ + D G LA++ Sbjct: 647 RDKVNQFQISANGRT----ALKRL---------------IKTLDGFKG-DTSPWTVLATV 686 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDM-LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 L+ LA + L F T + I + I Sbjct: 687 LLDRTRIVARLATSSGCSDRSQCIATWQLLNFLRVQPSTGEGLF-ITRTLDRIRRLVRLG 745 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 D L ++ + V + T+ + + F VV + GMN P Sbjct: 746 DDRDLRQLPVVAQSI---------------DAVRLMTIHGSKGLEFPVVHVPGMNADTLP 790 Query: 687 ---RQLAPLGFDLMSQKPKRGDRSR-----RDDDRYLFLEALISAQQKLYISYIGRSIQD 738 ++ A D M K R + + + LF AL A+ +L++ Y Sbjct: 791 GYTQKQACPPPDGMIAGSKANAREQFSLEHKAERECLFYVALSRARDQLFL-YAALRNAA 849 Query: 739 NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE 798 S R S + + + Q + P + ES P ++ Sbjct: 850 GSTRRKSEYLDRIEPNLIQRNIEPHHPVIEPPESL-----------------PIDWVADG 892 Query: 799 RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFR 858 + + + + + P R F+ LQ+ R Sbjct: 893 EF------------------------------KLSGDQVSLYESCPRRFFYTHVLQIGGR 922 Query: 859 TEDSEIPDTEPFILEGLSRYQINQQLLNAL--VEQDDAERLFRRFRAAGDLPYGAFGEIF 916 + PF + ++ + ++ A + + + + + G +G Sbjct: 923 RSPT------PFSKMHDAVRKVFRDMIEAESTIITNIEGSVEQALKVEGLAEHGY--APE 974 Query: 917 WETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 +++ +M + + + P + + + IT VQPD +L + + + Sbjct: 975 FKSLALDMVRYFNSIREGHAPETPSVLTMKFGDIPIT-----VQPDDVLIYSDGRRTFRR 1029 Query: 977 GMQLWLE 983 Sbjct: 1030 VRTGHKR 1036 >UniRef50_A0LVT8 UvrD/REP helicase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LVT8_ACIC1 Length = 1095 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 83/650 (12%), Positives = 159/650 (24%), Gaps = 91/650 (14%) Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 D S+ +P + + L L + V+V P Sbjct: 391 ADGDGSVDVRAFATPGAQAAYIAYHLRHA-HLVEGLGWTAMAVLVRSAAQIPPL-----R 444 Query: 428 SAPADRYLPYAISDRR-ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 A +P + ++ P++ + L + + +L + P AA + Sbjct: 445 RALTAAGVPVRVPEQSSPIVDVPIVRHLLLALRIAAG----QPLLDVERAPTAAA--SLA 498 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR---MLLGYAMESAQGE 543 EE + I G D A + G R ++L + + Sbjct: 499 EE--------LVAGPI--GRADPLQLRRLRIALRRLDRAAGGERSSAVVLAQVLNDPRD- 547 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP-----VCRDMLNAF 598 + A +A + A W + ++ Sbjct: 548 ------LEVIDEQAAAPALRVARAIEAGRRAVTEPAATAETVLWEIWNATGLATELYAQA 601 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR--LDQERISQRFLA 656 A AA ++ A +L D L + ++ Sbjct: 602 LSGGAVGAAADRDLDAVMALFAAASRYVDRLPRAGAALFADYLLGQEIPTDTLAARAPEP 661 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD------ 710 V++ T +S + VV L G+ +GV+P + D D Sbjct: 662 DGVDLLTAHAAKSREWDVVVLAGVQEGVWPDLRRRGSLLGLRDFLDVLDGRIADAADRGP 721 Query: 711 ---------------DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 ++R L A A++KL ++ + PS + ++ Sbjct: 722 GGSIRTLEERSAALAEERRLCYLAASRARRKLIVT-----AVSGDQEIPSRFLDDIDPLD 776 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 L S + + G Sbjct: 777 ADERPLTRPPRGLDLPSLLGDLRRAAETADDAVARRAAGHLAQLAAAGIPGAAPDGWYGL 836 Query: 816 AHSEFVQPL-PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 QPL P V L+ F P+R + R S Sbjct: 837 PAPSTDQPLRRDDEPVPVSPSRLELFTRCPLRWLLESCGG---RGRSSAS---------- 883 Query: 875 LSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFW-ETQCQEMQQLADRVIA 933 Q+ ++ + R R L G ++ Q + +R+ A Sbjct: 884 ----QVVGTAVHRAAATFSVDVAQLRERLDAALADTDLGTGWFAAAQRDRAAAMVERLAA 939 Query: 934 CRQPGQS------MEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQG 977 + + +TG + +++ D R L + Sbjct: 940 WMARNPRRLLAVERDFQVTVGRALLTGRVDRLEQDDDGRLYVVDLKTGRR 989 >UniRef50_B0MQS7 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQS7_9FIRM Length = 1235 Score = 78.9 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 56/423 (13%), Positives = 120/423 (28%), Gaps = 57/423 (13%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR----EVEVLHDRLLAMLEED-- 400 + A G I + + D + + + E + R+ M+ + Sbjct: 480 DYAENGRLICGLEKDSDSPISDEDKTEVCIVSEKDRKNAVVTEAAYIAARIKQMIAQGYK 539 Query: 401 --PTLTP---RDIIVMVADI-DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 P D +++ + + ++ + L + R P + Sbjct: 540 VGSDKRPCTEDDFAIIMRSPKNRIADYV-----NVLTANGLNVTYNQRAVLLDRPEIRLM 594 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 +SLL + + + ++ +L P+ T + + LR +G +G D +R Sbjct: 595 LSLLKVINDPYNDTELAKVLMSPLYC----FTADDMARLR-----TG-TFGFDISKIRAE 644 Query: 515 ELPATGQHTWRF----GLTRM-LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 ++ G+ R L M++ +G S + A + Sbjct: 645 CADELEKYCLGTKEIVGMKRKPLYSCVMQAVRGYDTSEYEKLHELTKDIKPDAKCAVFVN 704 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 L+ +R P E + + L + A + + E + G Sbjct: 705 DLDSFRNAATASSPQELIRNIYDRISADELLSVGDDPATRQANLELLVSYAREYSDYKDG 764 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM----NDGV- 684 + + E L + + V I + + + F VV + ND Sbjct: 765 GTLGDLIFNLENMSSLTAAQTAGGH---GVKIMSTHMSKGLQFPVVFVANCASSFNDDDY 821 Query: 685 ---------YPRQLAPLGFDLMSQKPKRG--------DRSRRDDDRYLFLEALISAQQKL 727 Y + MS+ + ++ L A A+ KL Sbjct: 822 TGDVVISEEYAVASKSVDISTMSKIQSPAYHAAAQEVKKQLESEEMRLLYVAATRAENKL 881 Query: 728 YIS 730 + Sbjct: 882 IFT 884 >UniRef50_A3DE23 UvrD/REP helicase n=3 Tax=Clostridium thermocellum RepID=A3DE23_CLOTH Length = 706 Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 42/298 (14%), Positives = 102/298 (34%), Gaps = 29/298 (9%) Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE---SGIRWGIDDDNVRELEL 516 L + + ++ L+ + F I + L + + WV S IR +D ++ Sbjct: 361 LYRNNISAIPLVDYLEYNNIP--FYIRDTNLHFFKHWVVNDVLSFIRLALDPCDIEAFGQ 418 Query: 517 PATGQHTWRFGLTRMLLGYA---MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 + ++R + Y M +G +++L + V +LA + ++ Sbjct: 419 IYYKIGAF---ISREMFEYVAENMGKGKGVMETLLNFPNLPEDTCNAVKYLAGQIETID- 474 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 + + L +E+ + + ++ I ++I + + + Sbjct: 475 YLKPLKAIEFIEKECEY-EKYIRRASKEMGYSIDSLNYIIDGLKSIASRVDS--FDEFFG 531 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L ++ + V + T+ + + F V ++ + DG +P + Sbjct: 532 R---LSILKSAIENS--GKNRYKNAVVLTTIHSSKGLEFDKVYMIDLVDGQFPSSKSISD 586 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 K G+ + +++ LF + A++ L + I S +N S V Sbjct: 587 C-------KEGNDALMEEEVRLFYVGVTRARKYLEL--ITFSKVNNKPVSVSRFVHRF 635 >UniRef50_D2RA55 UvrD/REP helicase n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RA55_GARVA Length = 515 Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 16/117 (13%) Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L + +Q + S V + T+ ++ + F V ++G ++G+ P Sbjct: 414 LEDAQSYGSQGISDIFASSNIST--VTVSTIHAVKGLEFAHVYVIGCSEGLIP------- 464 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR-SIQDNSERFPSVLVQ 749 D S +++R L A+ A++ L++SY R R PS + Sbjct: 465 ------FGSTTDDSALEEERRLMYVAITRAEKTLHLSYASRKDSGTGMNRVPSRFLA 515 >UniRef50_Q97JY0 ATP-dependent DNA helicase, uvrD-like n=1 Tax=Clostridium acetobutylicum RepID=Q97JY0_CLOAB Length = 609 Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 48/364 (13%), Positives = 112/364 (30%), Gaps = 76/364 (20%) Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 I + + E E + + + + + P +I V+ ++ S +++ V Sbjct: 288 GEIKYFSFVNKLEESEKISNLIKEKITKGED--PNNIAVLYR-LNDDSSYLECV----LR 340 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +PY I + + + + L L + +D +++ L+ Sbjct: 341 RDKIPYYIENDSSFFKRKEIAGIMGYLRLIQN--SKDD-------GAFLDVWNLRNIPLK 391 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 Y+ + S IR +N E+ F + S +S+ Sbjct: 392 YMSGTIL-SDIRKQSVKENKSYFEIFKKMDFNKMFQIR---------SRNDFIKSIEKLK 441 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + + + + +E L +W+ P+ + + Sbjct: 442 HKNKVS-------------IKQLIDDIVKEFNLYQWIKEKY--------PNKDEQEERKG 480 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 ++ I L D + + + V + ++ + + Sbjct: 481 SIDVLKSFIVND---------DLQFFIDFVQTSNMNIKKKDK---DGVKLMSIHRSKGLE 528 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 +K V ++G+ D +P R+ +++ LF A A + LY+S Sbjct: 529 WKSVFVIGIQDTRFPN-----------------ARNGLNEEARLFYVATTRAIENLYLSE 571 Query: 732 IGRS 735 IGR+ Sbjct: 572 IGRN 575 >UniRef50_C5EJB8 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJB8_9FIRM Length = 1121 Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 55/171 (32%), Gaps = 33/171 (19%) Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 + L A F + E L+E W I+ + +S + L Sbjct: 948 YEALKAQFTKRLKREKPWKLLED-WMKILNMTDNRSMDTFLCMSYFHKTMEDMLTTLTFG 1006 Query: 652 QRF----------LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 Q + V + T + + F V L G+ G+ P + +L Sbjct: 1007 QGNDVTRSGQDSCPSSAVTLMTFHASKGLEFPTVFLYGLKQGLMPLKSGSGPVNL----- 1061 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 +++R L A+ A+++L I+ + PS + E+ Sbjct: 1062 --------EEERRLLYVAMTRAKEELIIT---------TSESPSSFLSEIP 1095 >UniRef50_B2A610 ATP-dependent helicase/nuclease subunit A n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=ADDA_NATTJ Length = 1282 Score = 78.6 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 46/392 (11%), Positives = 118/392 (30%), Gaps = 83/392 (21%) Query: 384 REVEVLHDRLLAMLEED--------PTLT---PRDIIVMVADIDSYSPFIQAVFGSAPAD 432 RE +++ + +++EE+ D +++ + + VF + Sbjct: 566 REAQLIATTINSLVEEEYRIYDRDLDDYRKLDYSDFVILSRKTKEQAELVTNVF----QE 621 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +P + ++ +SLL + D+ + +L P++ + L Sbjct: 622 HGVPLYAELDTGYFAAQEVQVMLSLLKIIDNPRQDIPLAGVLRSPLV----GLDSNELVE 677 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 +R+ + + R+L ++ Sbjct: 678 IRR----------------------SNPGTDYYEACKRVLTN--------------SIEQ 701 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN--AFFLPDAETEAAMT 610 + + + + QL WR +++ER L E + + + + Sbjct: 702 QNQCSEKTIQKMQKFFSQLERWR-RISRERSLAELIWDIYQITDYLDYVAGFPGGRERQA 760 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN-ICTLMPMRS 669 + + + + G L+ + + Q D + V + ++ + Sbjct: 761 NLWSFYDRALQFDSFSHSGLVKFLNFIEKLVEQDFDLGKARTVSENENVVRLMSIHKSKG 820 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDL---MSQKPKRGD--------------------R 706 + F VV ++G+ + L + PK D R Sbjct: 821 LEFPVVFVMGLG-NNFNFNDQKGDLLLHKDLGLGPKLVDLTNRIKYPTIAHQAIKGSLGR 879 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 ++ + A+ A++KL++ G+ I+ Sbjct: 880 ETLAEEMRILYVAMTRAEEKLFLVGSGKDIES 911 >UniRef50_B9CK49 Putative uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CK49_9ACTN Length = 1037 Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 54/395 (13%), Positives = 110/395 (27%), Gaps = 22/395 (5%) Query: 550 YDESSGLIAELVGHLASLLM-QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 ++S E + S+L ++ L +E D Sbjct: 421 LRQASATSKECAATVESILNGRIEKALHRLLIA--CDEHREDFDDEAYLLISNSLSAIMT 478 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + + +A ++ + L + S+ ++ V I + MR Sbjct: 479 VAQALHKLEAKADIASEQKFYEVACQKSFSLCLNNGAAETVGSKAPVS--VEILSDKSMR 536 Query: 669 SIP-FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR-SRRDDDRYLFLEALISAQQK 726 F V LGM+ DL+++K + + + R L SA+ Sbjct: 537 EPNTFDAVICLGMDSVNTSLPTKDKASDLLAEKLEGVRPIAPLAEGRRRLYRMLASARTY 596 Query: 727 LYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 + ++ + S N SV+++EL+ + L E L Sbjct: 597 VSLACVAHSEDSNKTF-ASVVLKELLSCYETAEGEFNLPQLTRGEGRLSANLLLGGKTPA 655 Query: 787 MPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVR 846 D +P S + + + + ++ + P + Sbjct: 656 -KVDSLPLRPTGSISETLKPFVILPSYRGVEQPQI--------QELSASQIESYLECPYK 706 Query: 847 AFFQMRLQVNFRTEDSEIPDTEPFILE--GLSRYQINQQLLNALVEQDDAERLFRRFRAA 904 F Q RL+++ + FI L+ Q+ Q+ L D + A Sbjct: 707 WFVQRRLKLDRVDAGFSGLEKGTFIHRVLELTHMQLLQEALGT---SDALSDEYVWQAVA 763 Query: 905 GDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ 939 LP + + D + + Sbjct: 764 TSLPDSRISQDTLAHVRYVLSTQFDALAKEQFVAP 798 >UniRef50_Q896L9 DNA helicase II n=2 Tax=cellular organisms RepID=Q896L9_CLOTE Length = 698 Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 45/424 (10%), Positives = 120/424 (28%), Gaps = 83/424 (19%) Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 + + + I + S + + I + ++E + +L +E+ Sbjct: 305 NIVELSKNLIKINKLRSSKEIFTYNKFEGKINIIYSEDEKEQIENILKEVLYNIEK-KGY 363 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP--YAISDRRARQSHPVLEAFISLLSLP 461 +DI ++ I F + L Y +H + +S + L Sbjct: 364 NFKDIAILYRRNTEALIIIDY-FLRNNVEFNLNQKYF-----NIYNHFICNDILSYIKLS 417 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 +++ P I++ + L+ G R Sbjct: 418 LDNKNRHSFTRIINKPF----RYISKTHIEKLK------GFRR----------------- 450 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 + + + S L + + L + ++ + L + Sbjct: 451 ------------------KDNCFDIMCNLN-ISLLQIKTIKALKRNINKI----KKLDID 487 Query: 582 RPLEEWLPVC--RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 + ++ + + ++++ E + I + + + L Sbjct: 488 KIVDYIMKDIGYEEYIHSYSKKLKIDEEELLYIVYVLKKALEDFT--------SLEDFIR 539 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 + + + + + + ++ + + FK V ++ NDG P + Sbjct: 540 YIE---ESKNKALEKKENAITLSSIHSSKGMEFKSVFIINCNDGNIPHNSNVNDLE---- 592 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 D+ + +++R LF AL + L + S S ++E + S+ Sbjct: 593 -----DKFKLEEERRLFYVALTRSISNLNL--CICSNIRGKYLPYSRFLKECNLNLKDSY 645 Query: 760 YLPG 763 Sbjct: 646 NTDE 649 >UniRef50_D2LQX0 LexA repressor n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQX0_BACS4 Length = 808 Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 70/207 (33%), Gaps = 29/207 (14%) Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI--------SQRFLAG 657 + + + ++ + + L + ++ L+ I F + Sbjct: 354 AMQLDFLISEITTLLNDYRHSDICIVAKEKRLIESVSVGLENAEIFSEILNSTKPDFDSN 413 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD-DDRYLF 716 V + T+ ++ + FKV+ L+ +N+GV P D + D ++R L Sbjct: 414 KVKLVTMHSIKGLEFKVIFLIDLNEGVIPNDSLYD----------LDDEATLDSEERKLL 463 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI-DYIGQSHYLPGDEALNCDESEAR 775 + A LY+S S R PS ++E+ D++ + + + Sbjct: 464 YVGMTRANDLLYMS---------SVRKPSKFIKEITNDHLRVKRDCTLRPFHSIGIQDYQ 514 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSY 802 + L ++ + Q +Y Sbjct: 515 LTNQLVDINAKEEVVRQWLLKELVNTY 541 >UniRef50_C8WYD2 UvrD/REP helicase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WYD2_ALIAD Length = 706 Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 57/443 (12%), Positives = 120/443 (27%), Gaps = 116/443 (26%) Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 L ++ + + +L+ ++ I+ L + + Sbjct: 370 EFLRRFPDAKRVTLETNYRSHDLIVDVGRRIIRLNDGHQLPKRVVAHRSMPEGAIA---- 425 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSAP 430 S E + L L ++ ++ D V+ Y IQ+ +F A Sbjct: 426 ---QIVTVRSDLEEARFVAQE-LQRLRKEHGVSWSDCAVL------YRTNIQSRLFEEAL 475 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 AD +PY + + P ++ L L Sbjct: 476 ADADIPYHVVGDKHFYESPDVKII----------------LDYLRT-------------- 505 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR----MLLGYAMESAQGEWQS 546 + W L R + + E G W++ Sbjct: 506 ------------------------TQDTSDPTVWGHLLNRPKRYIPIDVVHEVQHGGWEA 541 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 V+ + + + ++ RR +EE + +++ P + Sbjct: 542 VVAHP-----------KCRAFVTTIDTLRR-------IEEPSKAIQWLVDN--HPGLVRQ 581 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + ++IA Y D + S+ V + T+ Sbjct: 582 QDEDEPIKWVDSLIASASR--YKTVASFLRFVDWII------EKSKEPKDEAVQLMTIHK 633 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + + V + G+ +G+ P + A G +L ++ L A A+ Sbjct: 634 AKGLEWTTVFVAGLAEGLLPHKKALKGEELR-------------EETRLCYVAATRARDN 680 Query: 727 LYISYIGRSIQDNSERFPSVLVQ 749 LY+ + + ER S V Sbjct: 681 LYL--MAAKWYGDKEREVSRYVN 701 >UniRef50_A1W088 ATP-dependent DNA helicase, UvrD/REP family n=30 Tax=Epsilonproteobacteria RepID=A1W088_CAMJJ Length = 691 Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 47/407 (11%), Positives = 114/407 (28%), Gaps = 77/407 (18%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLD--SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 A I + K + D +I + + E + + +L + + Sbjct: 292 LQAANNLISHNEQRLGKTLICTKDTGENIKILKNENEKDEGLYIAQEVKKLL--NSGVEA 349 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 ++I ++ +++ S I+ F + + Y + ++ IS L L + Sbjct: 350 KEIAILFR-VNALSRAIEEAF----MKKQISYKLLSGMRFYERLEIKDLISYLRLILNPS 404 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 +++ P + I E+ L+ L ++ + A + Sbjct: 405 DDLSFKRIINRP----KRSIGEKALKNLEEY-----------AKKRQISLFDALCESDGG 449 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 G+ + A A Q++ + + + +L + +++ + Sbjct: 450 VGI--LTTKKAQNEANIFIQNIHTL-----KSYDNAKKVFDNIEELFKIKDYFSEQDDGD 502 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 E + + E A +E I + Sbjct: 503 ERIRNLDEFYANLREKLKEDPEA--SLEDLLSEISLLSDQDNLDEE-------------- 546 Query: 646 DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 V + ++ + + F V ++G ++G +P + Sbjct: 547 ------------CVCLMSIHASKGLEFDYVFIIGFDEGFFPLNSEENLEEERRL------ 588 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQE 750 A+ A++ L IS S PS ++E Sbjct: 589 ----------AYVAITRAKKLLTISVANSRFYHGSRANINPSRFLEE 625 >UniRef50_C8S459 UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S459_9RHOB Length = 850 Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 54/412 (13%), Positives = 112/412 (27%), Gaps = 74/412 (17%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E+E L AM + D+ ++V + F LPY + Sbjct: 359 ELEALQRGTRAM----DPHSLDDMAILVR-----ASHQMRAFEDRFLTIGLPYRVIGGPR 409 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI-- 502 + ++ L S +++ P + + + + +++ +G+ Sbjct: 410 FYERLEIRDAMAYFRLAVSPADDLAFERVVNTP----KRGLGDTAQQNIQRRARAAGVSL 465 Query: 503 ---------RWGIDDDNVRELELPATGQHTWRF---------GLTRMLLGYAMESAQGEW 544 + GI +L T W + + R + + Sbjct: 466 LGGARELLAQGGIGGKGANQLRTFVTSCDAWHYFVANRGNELEIKRYADQLFVLREERSR 525 Query: 545 QSVLPYDESSGLIAE------------LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 A +G + L+ LA++ + E Sbjct: 526 LLRELELLDENDEARESVEREIVICGARIGRCERDIAILDGNHVLLAEQ--ILEESGYTA 583 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 + + + + L + ++ ++ E Sbjct: 584 MWQADKTPEAPGRLENLKELVKALEQF------------ENLQGFLEHVSLIMENESEEA 631 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 A V+I TL + + F VV L G DG++P Q + L +++ Sbjct: 632 ---AEKVSIMTLHAAKGLEFPVVFLPGWEDGLFPSQRSMDESGLKG----------VEEE 678 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLP 762 R L + A+ IS+ PS + EL + + P Sbjct: 679 RRLAYVGITRAEALCTISFAANRRVYGQWQSALPSRFIDELPEAHVEVLTPP 730 >UniRef50_A3TGM1 Putative DNA helicase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TGM1_9MICO Length = 1103 Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 88/674 (13%), Positives = 180/674 (26%), Gaps = 137/674 (20%) Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 D + L + V+ ++ +A + +P+ + P Sbjct: 410 ADHIARWLATHRSRGAVSAAVLCRKRAEFATV-----TAALEEHGIPHEVVGLGGLLLTP 464 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN-ESGIRWGIDD 508 +E ++LL + + ++ LL P++ + L L W + +R G Sbjct: 465 EVEDVVALLHVVQDPARGDHLVRLLSGPMMR----LGIADLDALAAWSRVQQRLRGGAVA 520 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 + ++L A + L + + V + + LA+ + Sbjct: 521 RHEKDLAPDAANAPSIIEALDSLPPRGWVGDEGERLSDVA---------RDRLAGLAATV 571 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 ++ L + E + P+ AA + + + A+ + Sbjct: 572 RRMRG-LTFLPLADLVLEAEKALGLDIEVLSRPEYTPAAARAHL-DAFGDVAAQFSQSA- 628 Query: 629 GDAVPLSLLRDELAQRLDQERISQR----FLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 D L D + +D+ER R V + T+ + + + VV + + + Sbjct: 629 -DRATLGGFLDWIKAAIDEERGLDRGYADATPDAVQVMTIHAAKGLEWDVVAVPALVEST 687 Query: 685 YP--------------RQLAPLGFDLMS-------QKPKRGDRSRR-------------- 709 +P R AP ++ RGDR Sbjct: 688 FPAHNLHSPSFKDGQWRISAPKDKGWLAGLQDGGLPYELRGDRDGLPEFGWRSAVGWDEL 747 Query: 710 ----------------DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 ++R L A A+ L ++ S + + R S + E+ + Sbjct: 748 AARLEEFAVSGGEHAVAEERRLAYVAATRARHALLLTASVWS-RPKTPRVTSRFLDEVRE 806 Query: 754 Y---------IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 I + LP + + + + + Sbjct: 807 LASVEGSPVRILEWVDLPVPPEDGSPLVKPGTEDGHEFVWPVDHLGHRRVRADAAARAVT 866 Query: 805 EWLPAASQAGKAHSEFVQPLPF----------------TLPETVPLETLQRFWAHPVRAF 848 E + + L LP + +L F P R Sbjct: 867 EASEGPESTSATVGPWARELDLLLAERARRASRHDDIVELPSHLSTSSLVAFATDPERF- 925 Query: 849 FQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLP 908 R P R + + LF +A + P Sbjct: 926 -----AAELRRPMPSAPAQ------AARRGTAFHAWIEEHYARAAIVDLFDLPGSADEDP 974 Query: 909 YGAFGEIFWETQCQEMQQLADRVIACR-QPGQSMEIDLAC----NGVQITGWLPQVQPD- 962 G E+ + +R + + +EI+ A +GV I G + V D Sbjct: 975 MGD----------AELPAMRERFLESPWAAREPIEIETALETVVDGVAIRGRIDAVFADV 1024 Query: 963 -----GLLRWRPSL 971 ++ W+ Sbjct: 1025 EGSDWVIVDWKTGR 1038 >UniRef50_D2MMT0 Putative uncharacterized protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MMT0_9FIRM Length = 858 Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 72/649 (11%), Positives = 188/649 (28%), Gaps = 140/649 (21%) Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 LE+++ + + ++ +S + + ++E+E++ + Sbjct: 138 LEIQDLVLTNDYYNHLLKDYFHPKIEFQESISDLRMALNIRQEIEIMAQEICTFQGR--- 194 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 + +++++ S P ++ +F +P+ + + + ++ L L Sbjct: 195 -----VNIILSNYSSQFPLLKQLFQRYG----IPFC---AYSSKQNSLVGRIFKDLFLVS 242 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 +E L L++ R + +E L +++++ ++ LP Sbjct: 243 YEQNTEAFLDLIENNAFGDR--LPQETQSVLSKYLSKVEVK---------APLLPLLTME 291 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 T +Q ++ + + L QE Sbjct: 292 TLW------------PKEAELYQQHQ-------------ENIDTFYHTIQESLFLLLQEG 326 Query: 583 PLEEWLPVCRDMLNAF-FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 L E + + + FL D + +E I E + + L Sbjct: 327 SLYEKIQRSYTVFRSLPFLKDPHEQTLAISLESFLNQIGDE---------IDRERIPFFL 377 Query: 642 AQRLDQERISQRFLAGPVNICTL-MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 + I G + + L P+ + V ++G+N YP + G ++ Sbjct: 378 ELVSQFQSIQLPNQIGTIMVTDLRHPV--LQADVSYIVGLNGHTYPNVPSKSGI--FNES 433 Query: 701 PKRGDRSRRDDDRYLFLEALIS----AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 ++RY + +S + ++++ SY + + + S ++ Sbjct: 434 YYAQIPYPSYEERYHTYLSQLSWIFHSGKQIHFSYSQKDY-EGKKLEVSY---DIQKLFS 489 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 Q + +P ++ S+ W Sbjct: 490 QKAQTKKAKE-------------------LLPRKRNRHEDNLSSSFMESWFTQNPILKG- 529 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS 876 + +++ ++ P + F L++ + F L Sbjct: 530 ----------------SVSSIEEWYRCPYQYFLNRLLKLKEQNV---------FEPNSLY 564 Query: 877 RYQINQQLLNALVEQDDAE--RLFRRFRAAGDLPYGAFGEIFWETQCQEM----QQLADR 930 I LL + + L + + PY ++ + + + +LA Sbjct: 565 IGTITHSLLEKALNEKKKLYYELSLQDLQSQLDPYFQLWKVLDPDRLEMISLIKDKLASN 624 Query: 931 VIACRQPGQSMEIDLA---------------CNGVQITGWLPQVQPDGL 964 + C Q + E + +G+++ G + ++ D Sbjct: 625 LYFCLQYLKEYEQNYDFLDPIASEQEFQIGLFDGLELVGKIDRLDQDQR 673 >UniRef50_C4Z484 DNA helicase II / ATP-dependent DNA helicase PcrA n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z484_EUBE2 Length = 1220 Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 66/433 (15%), Positives = 132/433 (30%), Gaps = 93/433 (21%) Query: 384 REVEVLHDRLLAML------------EEDPTLTP---RDIIVMVADIDSYSPFIQAVFGS 428 RE+E DRL ++ ++ P RDI+++ + ++ F Sbjct: 539 RELE--ADRLAKLIEGIVSSGVNVYDADENIYRPAEYRDIVILTRSVTGWAD----TFAD 592 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD-ITE 487 A DR +P S ++ +S+L++ D+ + A + + F T Sbjct: 593 ALMDRGIPAYTDSSTGYFSVREIQVILSMLTIVDNPVQEISLAA-----AMMSYFGGFTA 647 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L G+ + ++ + +H L A+ G+ Q Sbjct: 648 AEL----------GMVRKLGREHADKNTHNNLYEH---------LKAVAVLGGAGKMQ-- 686 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE--WLPVCRDMLNAFFLPDAET 605 + +L G A L +L +R + E L + W + + Sbjct: 687 ------ESDVKQLSGKCALFLAKLTEYRDKSSVE-SLYDLCWEMIYDSGYYDYVGTMPAG 739 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP--VNICT 663 + A + Y + L + + L V I + Sbjct: 740 AQRQANL-NVLLERAAGYGKSSYSGLFNFLRYIERLKKFDEDFAEGAASLDNENLVRIMS 798 Query: 664 LMPMRSIPFKVVCLLGMN------DGVYP----------------RQLAPLGFDLMSQKP 701 + + + F +V L G + D P + + Sbjct: 799 IHKSKGLEFPIVILAGAHKSINFMDATAPVLVDQNLGIAVDYVDLERRTKTPTIIKGAMA 858 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 +R R ++ L A+ A++KL I+ + + + L Y+G++ L Sbjct: 859 RRIVRESIAEEERLLYVAMTRAREKLIITGVVKDAD-----------KTLDKYMGRAEQL 907 Query: 762 PGDEALNCDESEA 774 D L+ +SE Sbjct: 908 AADGMLSFADSEN 920 >UniRef50_B9R0C3 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R0C3_9RHOB Length = 1046 Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 116/746 (15%), Positives = 210/746 (28%), Gaps = 102/746 (13%) Query: 147 AQWETGHLVEGLGEAQAWQAPL-WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPP 205 A W + A+ WQ L + +V+ + + R + Sbjct: 163 ADWSELAGLVPDDHARYWQITLDFLKIVQEAWPAHLAELGKMDPKARRSALIRREAQRIA 222 Query: 206 GLPSR--VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTR 263 P + V + G++ P + L+A+ + G I P L R Sbjct: 223 ATPPKGPVIVAGVTGSVPATAELLKAVAGLEQ-------------GVIVLPGLDLDLDDR 269 Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQEL 323 + S+ S Q LL G D L Sbjct: 270 SWEALGQRFVTGTRHGSDTKTPPPLSSHPQYSLKQLLDRLGVTRADVRAL---------- 319 Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQ 383 P ++L Q + E A + + ++++ + Sbjct: 320 -----DDPGDILSQRQRLVSEALRPADTSDGWTSYLDATPIEVRSAALNNVSLMTARNEA 374 Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 E L L +E T ++ D + V + A + S R Sbjct: 375 DEALSLAIALREAIELGETA-----ALISPD----RMLTRRV-AAELARWNIQADDSAGR 424 Query: 444 ARQSH-PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 P + ++ L + D+LALL P+ AR + + +R + + I Sbjct: 425 PLDQTAPAILTILAA-KLALNGCEPIDLLALLKHPL--ARLGLPIKDIRAAARALERGVI 481 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 R E P T R A + +D + L A L Sbjct: 482 R--------GERPRPGTDGLIMAVEACRAAAENAHTPRWKKVHE-GDWDVIADLAARLQS 532 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 LA L + R + E ++ + V + + A+ A E Sbjct: 533 ALAPL-ENMAGDRDPVPVEHLVQAHVDVMQAISAD-ETGAADELYAAEAGEALAAFWSGL 590 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PVNICTLMPMRSIPFKVVCLLGMN 681 G AVP L+ + + + +R V I M R F V L G+N Sbjct: 591 LEAEASGLAVPPHEWPSVLSALMSGDAVRRRLPRDPRVQILGPMEARLQAFDFVILGGLN 650 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL------FLEALISAQQKLYISYIGRS 735 +G +P++ + +P + D +R L F + + + +++ +S R Sbjct: 651 EGTWPQRTRNDPWL---NRPMKRDMGLEPPERRLGAAAHDFAQGMGA--KRVLLSRAAR- 704 Query: 736 IQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ 795 D + S +Q L G + N A + Sbjct: 705 -ADGAPTVASRWLQRLTTLAGPEIAAGMEARGNRYSQLAALLDR---------------- 747 Query: 796 PGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQV 855 A A +P P+T+ + ++R P F + L++ Sbjct: 748 -------------QAGDVRPADRPAPKPPLGARPKTLSVTEIERLVRDPYAIFARHSLEL 794 Query: 856 NFRTE---DSEIPDTEPFILEGLSRY 878 + D I + L+ + Sbjct: 795 QPVDPIGGEPGAADKGNLIHDALAEF 820 >UniRef50_C3JKU1 UvrD/REP helicase domain protein n=6 Tax=Corynebacterineae RepID=C3JKU1_RHOER Length = 1130 Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 93/634 (14%), Positives = 176/634 (27%), Gaps = 100/634 (15%) Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V++ +P +A + LP + P + I++L + Sbjct: 439 AVLIRRNADAAPLAEA-----LRSKGLPVEVVGLGGLLHTPEVADVIAMLRVVADPLAGS 493 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 + LL AR+ I + L L Q E I G T + Sbjct: 494 AAVRLL----TGARWQIGAKDLAALSQRSRELAISAGYGTAG------AVTDAEALTSAV 543 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP--LEE 586 L G E A G S+ + A + ++ +L R + Q + E Sbjct: 544 QDALPGENAEQA-GLVDSISDPGPAERYSALGYTRINAIAAELASLRERIGQPLTELVAE 602 Query: 587 WLPVCRDMLNA-----FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 V + A + + A + +++ Sbjct: 603 VERVLGIGIEAGARTRVGVVGTAGREHLDAFADVVANYATR-PTANLPGMLAFFAAAEQI 661 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG-------- 693 + L + V I T+ + + ++VV + ++DGV+P A Sbjct: 662 EKGLTPGEVEVAP--DRVQILTVHSAKGLEWEVVAIPHVSDGVFPSSTASGSWLGALAEL 719 Query: 694 --------------------------------FDLMSQKPKRGDRSRRDDDRYLFLEALI 721 + ++ K R D+DR LF AL Sbjct: 720 PPSLRGDRAVDADSADGVPVLDLEELYNRKDLENAITAHKKALSNRRLDEDRRLFYVALT 779 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE------------ALNC 769 ++ L+IS + + + PS + EL + + ++ Sbjct: 780 RTERALFISAHHWAESGSEPKGPSEFLDELHQMVTAENDADEEDSRGAIGVVEEWAPAPE 839 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP 829 ++E + A P DP + G ++ A L A + + E +P Sbjct: 840 PDTENPLAATPRTAQW--PPDPLGARRGAVEAGAASVLSALASLPQDSQEAEEPEDDPEN 897 Query: 830 ETVPLETL--QRFWAH--------PVRAFFQMR--LQVNFRTEDSEIPDTEPFILEGLSR 877 ++ L +R P + L+ + + + P+ L+R Sbjct: 898 WASDVDVLLAEREARANARAEVILPAQLSVTQLVDLKADPDELAARLRRPLPYPPNPLAR 957 Query: 878 YQINQQLLNALVEQDDAERLFRRFRAAGDLPYGA-FGEIFWETQCQEMQQLADRVIACRQ 936 A + R +LP A G + A R Sbjct: 958 RG------TAFHAWIERRFGATRLLDLDELPGAADTGAGPETDLVKLQDAFLRSPWANRS 1011 Query: 937 PGQ-SMEIDLACNGVQITGWLPQVQPDGLLRWRP 969 P + + + + G + G + V D W Sbjct: 1012 PIEVEVPFETSIAGTVLRGRIDAVFADPDGGWTV 1045 >UniRef50_C2HH84 ATP-dependent exonuclease n=2 Tax=Finegoldia magna RepID=C2HH84_PEPMA Length = 892 Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 58/485 (11%), Positives = 147/485 (30%), Gaps = 95/485 (19%) Query: 387 EVL-HDRLLAMLEEDP-TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E+L DRL+ + +D T + +++ S + +F S +P D + Sbjct: 252 EILEKDRLIDEVSKDSYTYDYNKMAILLEKDSS----KREIFNS-LKLHDIPVFGDDYIS 306 Query: 445 RQSHPVLEAFISLLSLPDSRFVSED-VLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 + + F+ +++L D+ + + + LD L + + R ++ Sbjct: 307 YRD---YKFFLDIINLLDNTKTLKQYIFSTLDSCFL----EFDLKDKVTFRNILS----- 354 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 +W L ++ ++ + + Sbjct: 355 --------------DFEFDSWED------LEKILKVNVNYETNLQILKDIKSYYLSFIET 394 Query: 564 LASLLMQLNIWRRGLAQERP-LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 +++L L + + + +L AE I +I Sbjct: 395 DSNVLSNLITLIQKKESDDTGFTLFSEKLLIILEDLDKTYAELVKKSKNINSYLMDLIKN 454 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 +L + I +L +R + V+ ++ MND Sbjct: 455 LKVDSTD------------------------YLVDGIRIYSLTDIRLSNYDVLYMVNMND 490 Query: 683 GVYPRQLAPLGFDLMSQKPKR----------GDRSRRDDDRYLFLEALISAQQKLYISYI 732 V P ++ F+ G+ +R+ DR F++A+ A +K+Y+SY Sbjct: 491 DVIPGKINYDFFNNEENIEFLQKRGVDILSDGENRKRNIDR--FIDAIKRANKKIYLSYN 548 Query: 733 GRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ 792 S + +++ + + + + D + + + + Sbjct: 549 TESSIKSR-----LILDKNVKSNQKIRKINTKNIKKIDTKQLHSVSAYEKYSLKQHLNRI 603 Query: 793 NYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMR 852 + + + E K ++ + + L+ ++ P++ +F+ Sbjct: 604 ENRISSKNIFDFE------VDDKTTQYILK-------KELSSTQLETYFECPMKFYFRYY 650 Query: 853 LQVNF 857 L++ Sbjct: 651 LKLKP 655 >UniRef50_C7MBM6 DNA/RNA helicase, superfamily I n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MBM6_BRAFD Length = 1094 Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 71/591 (12%), Positives = 145/591 (24%), Gaps = 90/591 (15%) Query: 325 AFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN--------KRPLDPLDSSITF 376 AF L + + E A + RS + + + Sbjct: 345 AFAAPEQPVLQRTLSTSWRNDEAVLAAANRLASPLRSAETGVTIPELQPRPGAGEGACEI 404 Query: 377 HVCHSPQREVEVLHDRLL-AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 + E + +L E++ P V+V + L Sbjct: 405 LEAADERAEALAIGRWILERRAEQEEDAPPASAAVLVRARRQIPALV-----DGLERSGL 459 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 A+ P + ++L + ++ LL P R + L L + Sbjct: 460 AVAVVGLGGLLHRPEVADVRAVLECAHDPGRGDALMRLLTGP----RLRLGARDLAVLGR 515 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 W + G R D + + + + +W SG Sbjct: 516 WRDRLGARLRRDGET--PGGQDEAESVSLVDAVDDL--------PPEDWTDPSG-RGLSG 564 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEE--WLPVCRDMLNAFFLPDAETEAAMTLIE 613 E + + +L ++ + L V +L + PD+ A + Sbjct: 565 TGRERLLQVQQILREMRRLLPLPLPDLVTAATRLLDVDLALLES--EPDSRALADLEAFR 622 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS-QRFLAGPVNICTLMPMRSIPF 672 A G + L + ++ L V I T+ + + + Sbjct: 623 DHAAAFDRTARRGGLGAYLDLLEISEDEEAGLAVTAAPEAAHDPAAVTIVTMHSAKGLEW 682 Query: 673 KVVCLLGMNDGVYP---------------------------------------------- 686 +V + G+ +G P Sbjct: 683 DLVAVAGLTEGTVPSYDLRRAKTDEAGRVRVPADGWLGTLANAAVPTALRGDADTLPELA 742 Query: 687 ---RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF 743 L+ + +DR L A+ A+++L ++ +S R Sbjct: 743 WAEADTQVDAESLIQEFRFAQGEESLREDRRLMYVAVTRARRRLLLTSAAWRTGLSSARP 802 Query: 744 PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA 803 S + E+ D + +S + R +A + Sbjct: 803 RSRYLTEVTDLVPESFRTVQEVPETNPLESERPQAQWPPRPGEPEQARARAAALLAEVAG 862 Query: 804 REWLPAASQAGKAHSEFVQPLPFTL-------PETVPLETLQRFWAHPVRA 847 ++ PA + + V L P + + + P A Sbjct: 863 QDDAPADPELAELVRRAVVDLEQQAAPPMVHSPPRLSASQVVQQARSPQAA 913 >UniRef50_A2F0U7 UvrD/REP helicase family protein n=1 Tax=Trichomonas vaginalis RepID=A2F0U7_TRIVA Length = 688 Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 66/183 (36%), Gaps = 27/183 (14%) Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNIC 662 + + L + +I+E + + DEL +Q I Q + V + Sbjct: 417 DDIADKLNLKDNLINDLISESEKPE-NLDLNPGDFADELK--FNQNEI-QENIDNVVQMT 472 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 T+ + + + V ++G+N G +P + +++ R LF A+ Sbjct: 473 TVHQAKGLEWDNVFIIGLNSGNWPSNRSKD----------------KEEKRRLFYVAMSR 516 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 A++ L++S+ S PS + E+ D+ +E ++ VK+ Sbjct: 517 ARKNLFMSFSQSS-------KPSPYLSEISDFYFDIFIEKEEENQMEKSDKSEVKSDKPI 569 Query: 783 LHT 785 Sbjct: 570 ELP 572 >UniRef50_C1XIE9 DNA/RNA helicase, superfamily I n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XIE9_MEIRU Length = 809 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 79/546 (14%), Positives = 159/546 (29%), Gaps = 124/546 (22%) Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQ 383 D F P +L I + R +++ + + L+P H+P Sbjct: 293 DTFRCPAPQVVLAG--RVIAHNQQREPKRLSLTKGFQGRVHLRLEP----------HTP- 339 Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS--PFIQAVFGSAPADRYLPYAISD 441 + + L + +L + P ++ V+V Y+ P+I+ +R +PY + Sbjct: 340 AQAQGLVSDIAGLLAQ--GRKPGEMAVLVR---LYAQTPYIE----QCLIERQIPYRVVG 390 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 P ++ ++ L L + L + + P RYL + + ++ Sbjct: 391 STPFYQRPEIQGLLAYLQLALNP-TKHLWLQVYNTPK------------RYLSRALADAV 437 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 R + L + +A + Sbjct: 438 WRR-------------VERGASLVEALR------------------AELAGAEERVARRL 466 Query: 562 GHLASLLMQLNIWRRGLAQER---PLEEWLPVCRDMLNA--FFLPDAETEAAMTLIEQQW 616 LA L L LE L CR +L + F+ + + Sbjct: 467 RELAELFEWLGGAIAQGPAHAVLVALEARLDYCRHLLRSSGFYEVGVGRAEGVRAFLEYT 526 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 + Q+ + + L DE +++ T+ + + + +V Sbjct: 527 RDKGRVFELLQHLERLAQEHLGDE----------PAPETRERLSLMTIFRAKGLEWPLVF 576 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 + N+G P + +++R LF AL + Q Y+ Y S Sbjct: 577 IPDCNEGTLPYSGSEN----------------LEEERRLFYVALTRSSQHTYL-YALSS- 618 Query: 737 QDNSERFPSVLVQE-----LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 S +QE ++ + + +A ++ A F Sbjct: 619 -----LPLSPFLQEAEYQQVLGAVERVGEALEMKAEELSTAQTLALARGAHELGLERFLH 673 Query: 792 QNYQPGERQSYAR---EWLPAASQAGKAHSEFVQPLPFTLPETVPL----------ETLQ 838 + ++ + Q A A +AG + + P L E + L+ Sbjct: 674 RWWKAEQAQPIAAKVLRLFAHAERAGWLEALGLTPEARGLWEAFDIEPGEGMAGEFADLE 733 Query: 839 RFWAHP 844 RF P Sbjct: 734 RFLLEP 739 >UniRef50_D1BPK1 UvrD/REP helicase n=3 Tax=Veillonella RepID=D1BPK1_VEIPT Length = 862 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 68/193 (35%), Gaps = 24/193 (12%) Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM-LNAFFLPDAETE--AAMTLIEQQWQA 618 ++ Q+ RR E P + + M + ++ E + + + + Sbjct: 676 AAFTNIASQMATLRRKAYTEMPTKLLAYIMNQMGVLEYYKSHGEAAKVEHIRDLYRIMEK 735 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRL--DQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 + A Y L+ L L E Q + I T+ + F V Sbjct: 736 L-----DAAYEGPAGLARLNQILQLAALTAGEPAQQVRNEDRIPIITIHQAKGSEFDYVF 790 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 L G+N+G +P F L R D+++ LF A+ +Q+L I++ +I Sbjct: 791 LAGLNEGTFPS-----PFAL--------AEGRDDEEKRLFYVAITRPKQELTITFEQTNI 837 Query: 737 QDNSERFPSVLVQ 749 + PS L+ Sbjct: 838 R-GRAVQPSSLLN 849 >UniRef50_C6A914 DNA helicase II n=11 Tax=Bifidobacterium RepID=C6A914_BIFLB Length = 529 Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 14/94 (14%) Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 G V I T+ + + +K V ++G+++G+ P + D+ +++R + Sbjct: 449 GRVTISTIHAAKGLEYKHVFVIGLSEGLLPYKPQSDDGDV-------------EEERRVL 495 Query: 717 LEALISAQQKLYISYIGRSIQDNS-ERFPSVLVQ 749 AL A+ L++S+ RS + R S +Q Sbjct: 496 YVALTRAEDTLHLSFAKRSDSQTTYVRRLSRFLQ 529 >UniRef50_UPI0001B56A46 ATP-dependent DNA helicase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B56A46 Length = 1057 Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 91/710 (12%), Positives = 199/710 (28%), Gaps = 115/710 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + + +P E + D+L D + ++ V+V F+ V A Sbjct: 358 VRVRLMPTPAAEASWIADQLRRAHLVD-GVPWSEMAVLVRSPA--RTFL--VLQRALRAA 412 Query: 434 YLPY-AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP----VLAARFDITEE 488 +P + ++ H + +++L + LLDV +L++ + Sbjct: 413 GVPIGSATEELPLAKHSAVRPLLAVLRIAAEP-------ELLDVDIAEMLLSSSLGGADP 465 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE--WQS 546 + G + EL + A +L+G A A + Sbjct: 466 LALRRLRRGLRRLELAGGGQRSSDELLVEALRGGD-------ILVGLADNEALPVRRVGN 518 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 +L + E V + L + +++ A+ + Sbjct: 519 LLSITHQAVSRGEGVEQV------LWELWQA-------SGLQERLLRLVDRGGSLGAQAD 565 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR--LDQERISQRFLAGPVNICTL 664 + + + + G A ++ D L+ + V++ T Sbjct: 566 RDLDAVVALFDS---AGRYADRLPKASVAAFADYLSSQNIAGDTLAPAAIPGEGVSLLTA 622 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGF-------DLMSQKPKRGDRS----RRDDDR 713 + VV + G+ +G +P DL+S + S ++R Sbjct: 623 HASAGREWTVVAVAGVQEGAWPDLRLRGSLLGVERLVDLLSGVDEHDKVSAIAPILAEER 682 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 LF A A++ L ++ + + PS + +L + L Sbjct: 683 RLFYLAASRARRTLLVTAVA-----GEDEQPSRFLDDLEENGADDGMLDSR---MKPPGR 734 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE--- 830 + V A L + D + +++ + AA+ AH + LP E Sbjct: 735 SLVLAELVGELREVVCDDKADPERRKRAAKQLARLAAAGVPGAHPDTWYGLPEASTEDPV 794 Query: 831 -------TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 + T++ P+R + + + G + + Q Sbjct: 795 HGPGDLMRISPSTVEILVKCPLRWLIERHGGSDPAQLA---------AVTGTLVHGLAQA 845 Query: 884 LLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG----- 938 + E+ + D F Q ++ + RQ Sbjct: 846 IAGGSTEEQ-IQAALDEAWVRVDAGAPWFSRRERSRVEQMLRNFVSWLEKSRQELIEAGV 904 Query: 939 -QSMEIDLACN----GVQITGWLPQVQ------------PDGLLRWRPSLLSVAQGMQLW 981 Q +E++L V + G + +V+ G + + + + Sbjct: 905 EQDIEVELPMGDEEVRVLLRGRVDRVEMDKDGRPVIVDIKTGKVPVSGADAEKHPQLAAY 964 Query: 982 LEHLVYCAS------GGNGESRLFLRKDGEWRF----PPLAAEQALHYLS 1021 ++ A GG + + PP+ + +L Sbjct: 965 QLAVLLGAVEGKNTPGGAKLVYVAKGNNKTGATQRDQPPMDEDNGREWLE 1014 >UniRef50_B8J1U7 UvrD/REP helicase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J1U7_DESDA Length = 1174 Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 57/183 (31%), Gaps = 38/183 (20%) Query: 630 DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 + LA + E + + A V I T+ + + F+ V L G+ DG+ P + Sbjct: 984 EQESWQEFLHHLAWLQETEMVRNK--AEHVQIMTMHASKGLEFQAVFLPGLEDGLLPLRR 1041 Query: 690 ---------------------APLGFDLMS-------------QKPKRGDRSRRDDDRYL 715 D ++ + + D++R L Sbjct: 1042 DMLFGPATDTITGAARNTGNSNADTADAIAPTVADTARTDAGPAANEYEAPEQEDEERRL 1101 Query: 716 FLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 AL A + L++S+ R PS ++++ QS P + L S Sbjct: 1102 LYVALTRAARALFVSHSARRTLYGKSLALPPSPFLEQIRHCCRQSVLTPHRQTLVRSLSL 1161 Query: 774 ARV 776 Sbjct: 1162 LPP 1164 >UniRef50_C5CYJ2 Exonuclease-like protein n=2 Tax=Comamonadaceae RepID=C5CYJ2_VARPS Length = 864 Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 60/421 (14%), Positives = 109/421 (25%), Gaps = 72/421 (17%) Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM--TLIEQQWQAII 620 L + R +A+ RPL +WL R++L A + +I W Sbjct: 364 ALLPFTEAVEGRRMAMARSRPLADWLRALRELLEAGEQWEPLAADMAGAKVIGALWLDAD 423 Query: 621 AEGLGAQY-GDAVPLSLLRDELAQRLDQERI--SQRFLAGPVNICTLMPMRSIPFKVVCL 677 A G ++ G L+ + L+ A V + L + F V + Sbjct: 424 AHGDDDEFPGGRHTLAEFTAWVRDVLEDASFVPPAGNEAPQVVVLPLHQLLGRAFGAVVI 483 Query: 678 LGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE----ALISAQQKLYISYIG 733 G +D P P G +Q+ + G +R + + L+ Sbjct: 484 PGCDDRRLPASPEPPGNWSAAQRAELGLPARETLEAAQRSAWAAALCNPCCEVLW----R 539 Query: 734 RSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 +S PS LVQ L H Sbjct: 540 QSDASGEPVRPSPLVQ-----------------------------ALQLDHALQ------ 564 Query: 794 YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRL 853 A + A + + + + P R F +L Sbjct: 565 --------MAADPRTPREVALQPTAYPTPSGELLPLRNISTSVYEDLRRCPYRFFALRQL 616 Query: 854 QVNFRTEDSEIPDTEPF---ILEGLSRYQINQQLLNALVEQDDAERL-FRRFRAAGDLPY 909 + E D F + L + + L D AER+ + A Sbjct: 617 GLRSADELDAEVDKRDFGNWLHAALGHF---HEALKEKPTSDAAERVAYISAAAERATRE 673 Query: 910 GAFGEIFWETQCQEMQQLADRVIACRQPGQSME---------IDLACNGVQITGWLPQVQ 960 + + + D + ++ ++ +Q+ G L ++ Sbjct: 674 FGLSDAEFLPFAAAWPAVRDGYLQWLAGHEASGAVFAESEPWMEQPLGSLQLVGRLDRID 733 Query: 961 P 961 Sbjct: 734 R 734 >UniRef50_B2ULJ6 ATP-dependent nuclease subunit B-like protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2ULJ6_AKKM8 Length = 957 Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 105/702 (14%), Positives = 191/702 (27%), Gaps = 123/702 (17%) Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE-----------F 358 + L + + L +V P L H +Q + EE Sbjct: 181 LLNSLRETGGNIILACTAEVPPP-LRHALQHAERNGVPVQIWIHAPEEEAASFDSWGCPL 239 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED-PTLTPRDII--VMVADI 415 ++RP+ D I +P R L + ++ TP DI V D+ Sbjct: 240 PEEWSRRPIPIRDGQIRI--AANPAR----LAEETCRIIARTAEGGTP-DIALGVCDPDM 292 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 + + A + P + + V++ +L + + + V +L Sbjct: 293 NV---ALDAALRQYGWGLHNP----EGKPFAGSGVMDLLRNLRRALEEKGTARPVYSLAR 345 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 +L A I + G +D + LP T + L+R+ Y Sbjct: 346 SSLLCASLGIKGQQ-----------GCCAALDKIQ--QKFLPETE----EYLLSRLKEAY 388 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 + + WR +A+ L E L L Sbjct: 389 PGAFPS--------------------------IQAILEWRNRMAEPGMLGERLMEWFPAL 422 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 + P+ E + + A L LL L + R Sbjct: 423 ATIYGPETEAMEMFHSCLSGLMRL-QQRSTAFSSPETALLLLMKCLQPLRVRNRRKAHAA 481 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG-DRSRRDDDRY 714 + + P + + L G+N+G P F + G D R R Sbjct: 482 LDSLGWMEVH---FRPERNLILTGLNEGTVPEGGVSDQFMPEELRETLGIDSFNRKKARD 538 Query: 715 LFLE-ALISAQQK---LYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 FL AL+ ++++ L I S + N PS L+ + + + Sbjct: 539 SFLLTALLHSREREGSLTILLSRTSSR-NDPLTPSSLLMRCPE--AELPHRVERLFQEIS 595 Query: 771 ESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE 830 + A + H P E A+ G + P Sbjct: 596 DVPAPLPYQRGNWH-LQP---------------AEGWKTAADIGAMAPGYKNPW-KEKGL 638 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL-------------SR 877 L+RF A P+R + + L + E+ +PD E + L Sbjct: 639 AFSPSVLKRFLACPMRFWMREALHM---NEEEFLPDKEDMAVNELGTMLHDVLECFCREH 695 Query: 878 YQINQQLLNALVEQDDAERLFRRFRAA-GDLPYGAFGEIFWETQCQEMQQLADRVIACRQ 936 + + A + E L + FR G P + + + A ++ Sbjct: 696 AVLKDGMNAASFQNAITEILEQTFRKQYGPSPLMPLLLQKRSMEQRLSVYAVQHLQALQE 755 Query: 937 PGQSMEIDLACNGVQITG-----WLPQVQPDGLLRWRPSLLS 973 + + + G + ++ R Sbjct: 756 GWSCIAFEHQVENWILGGFPMKFRIDRIDRHADGHIRVIDYK 797 >UniRef50_A3IS96 Helicase/exonuclease n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IS96_9CHRO Length = 231 Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 67/191 (35%), Gaps = 20/191 (10%) Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVC-RDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 +L Q+ +W+ + + RP + + L ++ D E Q+ + Sbjct: 54 FEALAQQIEMWKNDIYRLRPADLLGKILVESELYRYYEKDGENRTEN---LQKLVKMFKN 110 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 V L + + L + V + T+ + + F V + G++ Sbjct: 111 KDDKTLNSYVSLRNILEY--TALSKNIDHISKDNNQVLLITIHQSKGLEFDTVFVAGLSQ 168 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 G +P + + ++++ LF A+ A++ LY+S + + + Sbjct: 169 GEFPNYYSIKD-------------GKIEEEKRLFYVAMTRAKKSLYLSSYLKD-KKGYTK 214 Query: 743 FPSVLVQELID 753 S + ++ + Sbjct: 215 EISQFIDDIPE 225 >UniRef50_Q3SMQ4 Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMQ4_THIDA Length = 836 Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 71/536 (13%), Positives = 128/536 (23%), Gaps = 116/536 (21%) Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 L S F ++L LL P + ++ + L + + G Sbjct: 288 AAVVDRWLECVASDFPHVELLDLLKSPFVLDDPAARQDQVLQLELALRRQRVAQG----- 342 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 + + + G L + L Sbjct: 343 ---------------------------------------AADIERVARQEFGALPAWLAS 363 Query: 571 LNIWRRGL-AQERPLEEWLPVCRDMLNAFFLPDA-ETEAAMTLIEQQWQAIIAEGLGAQY 628 L R+ PL WL D L+ E +AA + + A+ + Sbjct: 364 LFDARQRFARTSAPLALWLQRLADSLDQLAARAPLEADAAGARVLETLAALGRDLAQD-- 421 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + + R L L+ + P+ + +L R F + ++G + P Sbjct: 422 SEKYDFNEWRRWLGLALESASFVDAGVDSPIVLTSLPAARGRSFDAIAVIGADARHLPAL 481 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLF--LEALISAQQKLYISYIGRSIQDNSERFPSV 746 P G + + + G R+ DD L AL+ L +S+ + D+ S Sbjct: 482 PTP-GLFSQATRRQLGLRTSADDAADAVTDLIALLGQGPAL-LSWRAWN--DDEPNPASP 537 Query: 747 LVQEL--IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 LV L + S LP + + T +P Sbjct: 538 LVLRLQALHLAAWSSALPEQGIGEPPARASTLPGRCTRPAPVVP---------------- 581 Query: 805 EWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 LP Q P F + L + E + Sbjct: 582 --------------------AARLPRRYSPTAYQTLLDCPYHFFARAVLGIRELDEADD- 620 Query: 865 PDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAF-------GEIFW 917 L+ ++L + D + F + Sbjct: 621 ------ALDKSDYGNALHRILKRFHDGDPPHDPAQALALLDACAEAEFAALPAYTAAAWR 674 Query: 918 ETQCQEMQQLADRVIACRQPGQSMEIDLA----------CNGVQITGWLPQVQPDG 963 D + G + V + G + +V G Sbjct: 675 SKWSAIAPAYVDAWLEWAGEGWRHASSESEFAVAVAVAGLGEVTLHGRVDRVDRRG 730 >UniRef50_C2BJG0 Helicase n=5 Tax=Corynebacterium RepID=C2BJG0_9CORY Length = 1027 Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 96/726 (13%), Positives = 190/726 (26%), Gaps = 143/726 (19%) Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 + + P + I+ R +V+ + + + + RDI Sbjct: 274 RFLRDFPADHDIELTEPHRTPSPACISIVDSDGRLR--DVVANTVRRR-HLEDGVPWRDI 330 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAIS-DRRARQSHPVLEAFISLLSLPDSRFVS 467 V+V + + + +P IS ++ A + L + + Sbjct: 331 AVIVRSTGDIGQMRRTLLAA-----GVPVHISPTDVVLAEQRLVSAVLLALRALEEDLSN 385 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 ++ LL PV G D +R L + G Sbjct: 386 SELEELLTGPV-------------------------GGADPVTLRRLIRGLRRWDSTTRG 420 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ----LNIWRRGLAQERP 583 + + L Y E +L S+L + L+ R LA Sbjct: 421 IDSLRG--------------LLYGELPDFNGQLTEREYSILERVRAVLSAGRDALASGDS 466 Query: 584 LEE-----WLPV-CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG-LGAQYGDAVPLSL 636 +EE W + L A L T + A+ + L Sbjct: 467 VEEVLWAVWSATELDNRLQASALRGGATGSQADRDLDAMMALFDAAGDYVERRPDSSLRA 526 Query: 637 LRDELAQRLDQERISQRFLA--GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL----- 689 + ++ + R A V I T + V + G +G +P Sbjct: 527 FLTHITEQELPTGVRDRRTAIPQAVEILTAHGAVGREWDTVIVAGAQEGSWPSLGETGSI 586 Query: 690 --APLGFDLMSQKPKRGDR-----SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 DL+ SR ++R LF A +Q+L I+ + + ++ Sbjct: 587 FGQEDLIDLLDHDIDPDTPVSHVASRLAEERRLFHVATTRHRQRLLIA-AVENPEGDTVS 645 Query: 743 FPSVLVQE-------------------------LIDYIGQSHYLPGDEALNCDESEARV- 776 PS + E L +G P +L + Sbjct: 646 EPSRFISEFAGRGVDVPGQAARRQAKRALRRTQLPRELGLDVPEPAPVSLRDGLEVDPLD 705 Query: 777 ------------KAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 + + + + A + A + + + Sbjct: 706 VAVLSVPAFVAQLRRVVTNQESGEVERKQAARQLARLAAADIPGAHPEQWWSARSVAAEM 765 Query: 825 PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL 884 P ++ ++ P L+ + E L R + Sbjct: 766 PLHTSGSLSPSRVEALLNCP--------LKAVLGNVAEDPSTEEH-----LLRGTLAHAF 812 Query: 885 LNALVEQDDAE-------RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP 937 A+ DAE F R + F + T ++ R Q Sbjct: 813 FEAIGRGMDAEKAKLLVMEAFERIQDVPQWQL-RFRLDEFSTLLDRARE-WARQSEVNQE 870 Query: 938 GQSMEIDLA---CNGVQITGWLPQVQPDG-----LLRWRPSLLSV-AQGMQLWLEHLVYC 988 +EI + V+I G++ ++ DG ++ + + + ++ + Y Sbjct: 871 LAGVEIPVGVRVSEEVRIGGYMDRLLRDGEGNYLVVDLKTGRSKPAKKEGEDHVQLMTYQ 930 Query: 989 ASGGNG 994 + +G Sbjct: 931 LALAHG 936 >UniRef50_A0LFH7 ATP-dependent nuclease subunit B-like n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFH7_SYNFM Length = 908 Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 64/485 (13%), Positives = 132/485 (27%), Gaps = 79/485 (16%) Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP----FIQAVFGSAPADRYLPYAI 439 RE + + L ++ ++ V++ D +Y+P ++ + G+ Y + Sbjct: 218 RE-QEVFGLLGDLIRGAGEGRLHELAVVLLDRGTYAPILSQHLKDLLGAQLEGENAAYNL 276 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 S + A + L + +LL P F L + E Sbjct: 277 LAGDVLTSQSLWRAALLPLDFCLGGESGTQLFSLLRSPY-YGYFGARGRALAQWDRVWRE 335 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 GI G+ A+ + G + VLP Sbjct: 336 QGIEKGL----------------------------TALLGSLGGREDVLPRRG------- 360 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 A L L + EW R P E + Q+ + Sbjct: 361 -----AELTEGLGALTDRGTRAAS--EWSAGLRSFWKQMEFPVIANERD-RIAWQRLTGL 412 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERI-SQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + ++ + L ++ + F + + + +R + FK + + Sbjct: 413 LDGFDAELGDSSMRAAEFAAWLTAAGEKAPVQPSGFEDAGIQVIGELELRGLAFKRLFVP 472 Query: 679 GMNDGVYPRQLAPLGF-DLMSQKPKRGDRSRRDDDR--YLFLEALISAQQKLYISYIGRS 735 G GV P+ L F + ++ G + + +LF + +A++ +S Sbjct: 473 GFLSGVIPQPARSLPFLSVRERRLVLGGTAESQFEFAAHLFGQVQAAARET-VVSRPLLG 531 Query: 736 IQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ 795 PS + + L + + + Sbjct: 532 EG-GEPCLPSPF---------------WPASEETMAPVIPWRHDLPVMQR-----ARWVR 570 Query: 796 PGERQSYAREWLPA----ASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQM 851 G A G++ + + P V + L+ A R F ++ Sbjct: 571 DGIEGIAAAMERKEPAGKTHAGGESAPDLYRAERLRFPSEVSVSELELLLACAGRFFLRV 630 Query: 852 RLQVN 856 L + Sbjct: 631 ILGLE 635 >UniRef50_UPI0001AEED98 ATP-dependent DNA helicase n=3 Tax=Streptomyces RepID=UPI0001AEED98 Length = 1079 Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 63/471 (13%), Positives = 123/471 (26%), Gaps = 61/471 (12%) Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 E++ + D +L + + ++ V+V P ++ A +P I Sbjct: 353 AELDNIAD-ILRRAHLEEGVPWGEMAVLVRSGGHTIPAVR----RALTSAGVPLDIDGND 407 Query: 444 -ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + P + ++ L + + + + + W+ Sbjct: 408 LPLRHEPAVAPLLTALRAAATAALQDRAEE--EAGPVPEPEP-DAGTQDTAPAWL----- 459 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 D L L A+ R LG A+ + + LP + L L Sbjct: 460 ------DTETALTLLASPLAALDAADQR-RLGRALRDEERAAGNPLPPPSDTLLARALAE 512 Query: 563 HL-----------ASLL-MQLNIWRRGLAQERPLEE----------WLPVCRDMLNAFFL 600 A LL L R LA+ EE W Sbjct: 513 PERLVTHEGYAHGARLLGELLRRARTLLAKGGSAEEALWELWDGTTWPQRLERSARRGGA 572 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 + + + + A+ + D V Sbjct: 573 AGRNADRDLDAVCALFATAARAEERTGGRGALNFLAEIEAQDIAADTLTRRAARP-DAVR 631 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR------RDDDRY 714 + T + + +++V + G+ +GV+P + + G ++R Sbjct: 632 LMTAHRSKGLEWRLVVVAGVQEGVWPDLRRRGSLLEADRIGRDGLAEPLPPGALLAEERR 691 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 LF A A ++L ++ + +D PS + EL + ++ Sbjct: 692 LFYVAATRAAERLVVTAVKAPAEDGD--QPSRFLSEL---------GVEPKDVSSRPRRP 740 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 A L DP+ + R AA P Sbjct: 741 LSVAALVAELRATTVDPRVSATLREAAAHRLAKLAALTDEDGRPLVPTAHP 791 >UniRef50_C1RP66 DNA/RNA helicase, superfamily I n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RP66_9CELL Length = 1162 Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 69/507 (13%), Positives = 127/507 (25%), Gaps = 76/507 (14%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDP----LDSSITFHVCHSPQREVEVLHDRLLA 395 +DI L+ + + L P D + V + + E + + + Sbjct: 368 NDIAILDAANAVAAPLRTGGARVDVPRLAPRPGAGDGLVQALVAQTVEDEADAVAAWVAR 427 Query: 396 MLE-EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 R V+ + P A LP + + P + Sbjct: 428 WWRPAHHPAGARTAAVLCRKRSQFEPL-----RRALRAAGLPVEVVGLGGLLATPEVVDL 482 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 +++L + V+ LL AR + L L +W + G R + Sbjct: 483 VAVLQAAHDPTRGDAVVRLL----TGARTRLGASDLHALGEWARQ-GARPTGRPGGAPGV 537 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 E + + L W+S + E L L L Sbjct: 538 EADVVDERSLVDALD--------APPPPGWRS----PSGRTVTPEGRRRLLDLAAVLRAV 585 Query: 575 R--RGLAQERPL--EEWLPVCRDMLNAFFLPDAETEAA-MTLIEQQWQAIIAEGLGAQYG 629 R +GL+ + E L + A A + + G Sbjct: 586 RAHQGLSLPELVGEAERLFGLDIEVQARADVTPGRARAHLDALADVAAEFARGADRPTLG 645 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ- 688 + D L+ V + T+ + + + V + GM DG P Sbjct: 646 AFLAWLEAADAREDGLELPVT--EPDPDAVQVTTVHAAKGLEWDAVVVAGMVDGGLPATA 703 Query: 689 ---------------------LAPLGFDLMSQKPKRGDRSRRD----------------- 710 D + + G S ++ Sbjct: 704 MLGKDGPKDSAWLTGLGVLPYPLRGDADDLPRLECAGAESPKELAERLERFRLDAGDHEV 763 Query: 711 -DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 ++R L AL A++ L ++ + R S + +L+D +E Sbjct: 764 AEERRLAYVALTRAREALLLTAAYWGDAK-APRQASPFLTDLMDAGLAEVVGRAEEPDPK 822 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQP 796 + PF P Sbjct: 823 ASNPRAALTPTAQW-PADPFARDGAAP 848 >UniRef50_A3CVL1 UvrD/REP helicase n=4 Tax=Methanomicrobia RepID=A3CVL1_METMJ Length = 911 Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 54/391 (13%), Positives = 111/391 (28%), Gaps = 96/391 (24%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 EV+ + D++ L + + DI ++ + + +P F R +P+ + + Sbjct: 337 EVDWIADQI-QALVREEKCSYSDIALLFRSVSTSAPP----FIDEFRRRDIPFVVGGKVG 391 Query: 445 RQSHPVLEAFISLLSLP-------DSRFVSEDVLA---LLDVPVLAARFDITE-----EG 489 P + L + ++ L LL+ V+ I + Sbjct: 392 LFRRPEILGIGQLFAWLWEDGFWQQGKWSRLPALRGEDLLEEAVVNWNQGIPDLALEASD 451 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + LR+W + + FG +LLGY +V+ Sbjct: 452 VLNLRRW--------------KDSVLNSTYDNFSQVFGELLVLLGYHGLDPDDVRHAVIM 497 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + +G +LL + R E L LN + Sbjct: 498 AN---------LGRFNTLLTDYETAIMLGGRRRNWETDLKGLCWYLNTYAS--------- 539 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + +++ V + T+ + Sbjct: 540 ---------------------------------SKYEEQTGDDIGGVDAVQLVTIHQSKG 566 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGF------DLMSQKPKRGDRSRRDDDRYLFLEALISA 723 + + +V + M +P + G +L GD + +R L AL A Sbjct: 567 LEWPLVFVPCMVRQRFPSSMVGKGRTWLISPELFDVAKYEGD---LESERKLMYVALTRA 623 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 + +SY + + + S V ++ D Sbjct: 624 KDVAVVSY--FTSMNGRRKGRSAFVGDIEDL 652 >UniRef50_B5IF83 UvrD/REP helicase domain protein n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IF83_9EURY Length = 927 Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 51/383 (13%), Positives = 107/383 (27%), Gaps = 77/383 (20%) Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS-PFIQAVFGSAPADRYLPYAI 439 +P E + +++ L + L D +++ + + PFI+ VF +PY + Sbjct: 340 TPDDEARWIANQI-QKLVNEKGLKYSDFGILLRSVGTSGDPFIK-VF----KGMGIPYIV 393 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL-----R 494 A L L + L Sbjct: 394 GGTIGLFRREEAMAVGKL-------------FNWLYDGGFFKNYRGKVTEYDELVDSALD 440 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ--SVLPYDE 552 W++ +G+ G D ++++ L W+ + ++ D Sbjct: 441 DWISATGLLEGEDRNDLKAKLL------KWKMDVYSGTYPNFQDAYHALLNILDFKKLDP 494 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 + + A ++ +L L + L W Sbjct: 495 ENKIHAAIMANLGRFSNLLGDYENALRLGGNKLTWNK---------------------SN 533 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 I Y + + +R V I T+ + + + Sbjct: 534 LNGLMWYINLYATTAYEEQLS-EDIRGI----------------DAVQITTIHQAKGLEW 576 Query: 673 KVVCLLGMNDGVYPRQLA-PLGFDLMSQKPKRGDR--SRRDDDRYLFLEALISAQQKLYI 729 VV + + +P L+S++ R + DD+R L A+ A+ L + Sbjct: 577 SVVFIPSLVSRRFPSSHVGEHKEWLISRELFPASRYDLQMDDERRLLYVAVTRAKSTLVL 636 Query: 730 SYIGRSIQDNSERFPSVLVQELI 752 S N + S ++E++ Sbjct: 637 S--AFRRITNKVKI-SPFLEEIL 656 >UniRef50_B8DM59 UvrD/REP helicase n=5 Tax=Bacteria RepID=B8DM59_DESVM Length = 1244 Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 54/140 (38%), Gaps = 5/140 (3%) Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 WQ+ L Y + L + ++ + + E + + + V I +L + + F+ V Sbjct: 1084 WQSSAFRALSRAYDTHGGWAGLMNWISLQSELELVRRG--SEKVQIMSLHAAKGLEFRAV 1141 Query: 676 CLLGMNDGVYPRQLA-PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 L + DG+ P A L R+ D++R L + A + L++S R Sbjct: 1142 FLPALEDGIMPFAGAGTLTGKPQRDGASPDTRTDMDEERRLLYVGMTRASEGLFLSCAAR 1201 Query: 735 SIQDNSERF--PSVLVQELI 752 E PS + ++ Sbjct: 1202 RQLYGRELRLKPSRFLDDVP 1221 >UniRef50_B9MLH8 LexA repressor n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLH8_ANATD Length = 819 Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 52/365 (14%), Positives = 110/365 (30%), Gaps = 58/365 (15%) Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH--PVLEAFISLLS---LPDSRFVS 467 +++ Y + + + +P I+ + +++ + SLL L D + ++ Sbjct: 165 RELEEYQST-DRIGRTVQNQKDIPQKIAKNSETRKAIFELMQLYTSLLKENGLVDFKDMA 223 Query: 468 EDVLALLDVP----------VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 VL L ++ D+T+ L L+ Sbjct: 224 LIVLDYLKANEHKITKYTHIIIDESQDLTKVQLEILKLL---YNSEKSYSSIMFIADTAQ 280 Query: 518 ATGQHTWR-FGLTRMLLGYAMESAQGEWQSVLPYD-ESSGLIAELVGHLASLLMQ---LN 572 + H+W G + +G+ M + + L L+ ++ + Sbjct: 281 SIYTHSWLIRGRSFASIGFDMTGKSYTLSKNYRTTVQIANLAYSLIEKTPEIIEDENFVK 340 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ------QWQAIIAEGLGA 626 P+ L F + E E I Q + I Sbjct: 341 PALIDKQGPLPV----------LKIFQTEEQEAEFVYNEIVNNLAFEFQLKDIAVICKNR 390 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 +Y ++ + L + F + + T+ ++ + FKVV ++G+N + P Sbjct: 391 KYLESFYNYVSSKGLKAIFLNSDSGENFEEEGIRLITMHSIKGLEFKVVFIIGLNSNIIP 450 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 + + D+ LF + A ++LY+ R PS Sbjct: 451 YSSCEDN---------EVAKLQETTDKKLFYVGMTRANERLYLCCS---------RKPSK 492 Query: 747 LVQEL 751 + EL Sbjct: 493 FLSEL 497 >UniRef50_O26572 DNA helicase II n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26572_METTH Length = 916 Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 61/437 (13%), Positives = 117/437 (26%), Gaps = 88/437 (20%) Query: 552 ESSGLIAELVGHLASLLMQLNI-WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 G AE + L + ++ L+ + E R ++ +++ A Sbjct: 467 GVHGEDAEKILGLNRIRHEVGKGSLTVLSTFYSILEVTGYLRRLIED----GSDSSRAKI 522 Query: 611 LIEQQWQAIIAEGLGAQYGDAV-PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + ++I + G + L L L + + A V I T+ + Sbjct: 523 FNLAKLSSLIDRYEAIKPGARIQDLLWYLYLLPTHLHHDEAALEDPA-SVKIMTVHQAKG 581 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDL-MSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F VV + + +G +P + + + + D+DR LF A+ AQ L Sbjct: 582 LEFPVVFICSVINGRFPVKRRKERDTIPIPGELLLSPGEVPDEDRRLFYVAMTRAQDALI 641 Query: 729 ISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP 788 IS R + + S + +L + S +R Sbjct: 642 ISTAPR--INTRKVGVSPFITDLRE--------KCGIYECDCTSVSRCLEREWSEEPL-- 689 Query: 789 FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAF 848 N+ L + P R Sbjct: 690 --RINFSA----------------------------------------LFTYEECPFRYM 707 Query: 849 FQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ-INQQLLNAL-VEQDDAER----LFRRFR 902 + + RY I + L L + ++E L RR Sbjct: 708 LIYHYGFVYPETF-------------MQRYGIILHRCLEELHLAMKNSEEINGALIRRIV 754 Query: 903 AAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME--IDLACNGVQITGWLPQVQ 960 +P G ++ +E+ S+E + + I G + Sbjct: 755 ERCWIPMGRDDKVKKRRLERELLNYYHDTRDHTGEVVSVEEPFSIPDTDIIIEGRTDLI- 813 Query: 961 PDGLLRWRPSLLSVAQG 977 +R R L + Sbjct: 814 ----IRTRDGELELVDF 826 >UniRef50_B9AD93 Putative uncharacterized protein n=2 Tax=Methanobrevibacter smithii RepID=B9AD93_METSM Length = 994 Score = 76.6 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 49/471 (10%), Positives = 133/471 (28%), Gaps = 54/471 (11%) Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 + + D + PQ E + + + + + + Sbjct: 314 IRTSEAFIKPQRKEYSKKYLVGARNEDKASYILESLDPQEEAQKIFNLIKDLKDNGKIRQ 373 Query: 405 PRDIIVMVADI--DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 D+ ++ I + PF+ F + Y IS +++ ++L Sbjct: 374 YSDVAILYRSIVSNKNIPFLIDEFKKND----ISYHISGTEDLIESDEVKSILTLFYYIA 429 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + ++ L+ L R + + R+ E+ R+ ++ E ++ T + Sbjct: 430 RKLDYSYGMSNLEKEWLNLRAFCGIDFIPKFRKLSVETK-RYLMELQENFENDVLKTEKE 488 Query: 523 -----TWRFGLTRMLLGYAMESAQGEWQSVLPYDE--SSGLIAELVGHLASLLMQLNIWR 575 T + G + + ++ + E G +L R Sbjct: 489 VYFELTGKKSRKNKFNGVFTRNEDVLIEIFKRVNKPVVDLDLIEDAGD-REFFTELEKLR 547 Query: 576 RGLAQERP------LEEWLPVCR--DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 + LE + + + + + + E + + + + I Sbjct: 548 ENVFSSDDEDKLTILEVYYELLNLCGYFDDLVINNGDYELELENLSKISRTIFNYESIIS 607 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 D L + + V + T+ + + F V + +++ +P Sbjct: 608 AKDVRGLFFFLTNVIEGYGTSSSDV----DGVQLMTVHKAKGLEFPVTIVSSLSEYNFPL 663 Query: 688 QLAPL--GFDLMSQKPKRGDRSR----------------RDDDRYLFLEALISAQQKLYI 729 D +++ ++ ++ + A+ AQ L + Sbjct: 664 APRDPMREKDNINKDDTFYTPNKFLEYKDCSEADEVNLGLAEENRVIYVAMTRAQDILVL 723 Query: 730 SYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 S +G+ ++ + + +Y ++ L + K +L Sbjct: 724 SVVGKMPEE---------ICRISNYFNKNLDLDNMSISSVGSKPEENKLNL 765 >UniRef50_A5IY88 ATP dependent helicase n=2 Tax=Mycoplasma RepID=A5IY88_MYCAP Length = 734 Score = 76.6 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 58/432 (13%), Positives = 144/432 (33%), Gaps = 73/432 (16%) Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + N + I + SP+ EV + ++ + + + ++I + + Sbjct: 320 RNRFNKNLVTDNSDGDEIEYIHAFSPEAEVRWVVQKINDL--KKQKIQLKNIAIFYRS-N 376 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 SYS F + + Y I + +++ L Sbjct: 377 SYSRN----FEEQLMNEKINYKIFGGEKF-------------------YQRKEIKDALA- 412 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 L +D + L+ + + L +++ +A Sbjct: 413 -FLRVIYDGNDLQLKRIIN----------------------VPPRKIGEASLNKII-SFA 448 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 E +++++ + + + E++ ++ +LL +N ++ L Q + L + Sbjct: 449 NEKNLSLYKTLVNHYKELPVPKEVIINIIALLNCVNKYKAALRQGNKIHVVLKSFLKEI- 507 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA-VPLSLLRDELAQRLDQERISQRFL 655 F E E+ +A++ + + L + + L S Sbjct: 508 GFLKYVNEDVGLKGTGEENIRALLEGIKSWEITNPNKGLKEYFEYI--SLISASDSSNES 565 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 V++ T+ + + F V L+GM + ++P A + M +++R L Sbjct: 566 MSYVSLMTVHAAKGLEFDNVFLVGMCENIFPNYRAYKVAEAM------------EEERRL 613 Query: 716 FLEALISAQQKLYISYIGRSIQDNS-ERFPSVLVQEL-----IDYIGQSHYLPGDEALNC 769 A+ A++KL++S + + E+ PS ++E+ + + + + D L Sbjct: 614 AYVAITRAKEKLFVSDSRGLLLYSQTEKKPSRFLKEMGIDINKHILQKDNSIFVDGELED 673 Query: 770 DESEARVKAHLT 781 +E + + Sbjct: 674 EEQIRKRNKKII 685 >UniRef50_P75437 Probable DNA helicase II homolog n=3 Tax=Mycoplasma RepID=UVRD_MYCPN Length = 715 Score = 76.6 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 29/200 (14%) Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 +++ L G L + + + +L F + Sbjct: 452 LEQAIFLDEHTRGELTEAAKVFTRLIKFVEE--------QQFEALLAFTFEALNTDQFVC 503 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 I + Q + E ++ +EL + D+ + S+ +N+ T+ + Sbjct: 504 NFIFRTLQKLQTE------NKNFTITDFINELRFQQDELKQSK---DNVINLITVHSAKG 554 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F+ V + G+N +P + DL R D+ LF AL A++ L++ Sbjct: 555 LEFEAVFIYGINQDNFPLKSKNQIIDL----------QRELDELRLFYVALTRAKKYLFL 604 Query: 730 SYIGRSIQDNSERFPSVLVQ 749 + +PS ++ Sbjct: 605 --LSVYQMSGEIIYPSKFIR 622 >UniRef50_B0DAK6 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0DAK6_LACBS Length = 1055 Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 53/438 (12%), Positives = 123/438 (28%), Gaps = 64/438 (14%) Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS-IT--FHVCH----------- 380 L ++ D + E + + + D S I H H Sbjct: 305 LSKMRRDFPDTEQVLLEENYRSTAAILKASLAIISQDKSRIQKSLHTSHPNGFTPVLYQV 364 Query: 381 -SPQREVEVLHDRLLAMLEE-DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 + E + + ++ L D ++++ + V +A +P Sbjct: 365 QTEHEEAAFIAIEMKRLVAHMGGALNWGDFVILLR-----FNALSRVIETALQKEGIPSR 419 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 + ++ ++ L + D+ ++VP I E+ + L Sbjct: 420 VLGGHKFFERLEVKDLLAYLQVVDNPNFVPAFKRAVNVP----GRGIGEKTVAELIGRAE 475 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 +S + + + R + + +S+ +S A Sbjct: 476 KSN-----QSPLAIVEAICDNKAPDIKPAVKRKVAPFV-----TAIRSLRAQAHNSSSPA 525 Query: 559 ELVGHLASLLMQLNIWRRGLAQERP-LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 +LV L L+ + L + + E ++++ F + E + Sbjct: 526 DLVRKLVDLIK----YEDHLKKTQSDWESRWENVKELIT--FASEMEAQNQAEEAADAVA 579 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 G + PL + + S+ V I T + + + VV + Sbjct: 580 G----GDNSIEMSTTPLRQFLQASMLSSEGDNQSEEGNKDKVTISTCHSAKGLEWPVVMI 635 Query: 678 LGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ 737 ++ +P + ++R L A AQ LY+S + Sbjct: 636 PSVDQNTFPFYRSED----------------TAEERRLLYVACTRAQSLLYVSRATTRMV 679 Query: 738 DNSERFP--SVLVQELID 753 + S + +++ Sbjct: 680 AGETKSKELSEFISSVLN 697 >UniRef50_Q311L2 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q311L2_DESDG Length = 997 Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 79/565 (13%), Positives = 170/565 (30%), Gaps = 89/565 (15%) Query: 351 AGVNIEEFSRSDNKRPLDPLDS--SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 ++ E ++ +P D +I +H +++ L +L + + Sbjct: 275 EHESLLEQWQAGTVLLEEPEDRHATIEYHEGFDLHSQLDALQKKLTQTDSLEQS------ 328 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLP---YAISDRRARQSHPVLEAFISLLSLPDSR- 464 V++ D P + +LP IS P+ + +++ L + R Sbjct: 329 AVVLPDSGMLMPLL----------HHLPRKDVNISMGYPLGKSPLAQLLDTIMDLQEGRT 378 Query: 465 ---FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 + ++ L+ P L L+ + + + S +R G + R L++ + Sbjct: 379 PSGYPWRRIIDLIRHPYLKMLSLHNARPLQQVFRHMERS-VRQGARHTDPRNLQIEYLAE 437 Query: 522 HTWRFGLTRMLLGYAMES-AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 T + A+ + + L E +L G LA + L Sbjct: 438 ADATGAGTAAVDDEALAALVSRIFDLTLTRWERVSTPQQLAGVLADMCTLL--------- 488 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL-GAQYGDAVPLSLLRD 639 L DM F + E L+ + A+ + A+ + ++LR+ Sbjct: 489 -------LEQGADMWKRF---PVDAECMYRLMHRVIPALRESTVRDAELDSGLLYTILRE 538 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 + ++ L G + + ++ R + F+ V +L + P A + Sbjct: 539 VMNA--ERVPFEAEPLTG-LQVMGMLEARLLRFRRVYVLDATENNLPGVPANDPLLPENL 595 Query: 700 KPKRGDRSRRDDDR---YLFLEALISAQQK--LYISYIGRSIQDNSERFPSVLVQELIDY 754 + G R +R Y F + A++ LY + +S + ++ S ++ELI Sbjct: 596 RGLLGLPDIRHRERVSAYNFFRLIKGAREVTLLYQAGTTQSGLFDEKKQRSRFLEELIWQ 655 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG 814 Q Y+ + Sbjct: 656 DEQRTGRLLQAGTP----------------PLHAVS-----------YSIPAISLHDAVI 688 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 + + L V L + PV F++ ++ + +E D Sbjct: 689 PRSATIDDRIRELLARPVSATMLDSYLRCPVSFFYERLCRIAPAEQVNEGDDH------- 741 Query: 875 LSRYQINQQLLNALVEQDDAERLFR 899 L + +L + + R Sbjct: 742 LGVGDLMHAVLQEFFTPYAGQEITR 766 >UniRef50_C4G8V9 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G8V9_9FIRM Length = 1315 Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 47/367 (12%), Positives = 110/367 (29%), Gaps = 50/367 (13%) Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 L +DI++++ S VF +P I+ + + F++LLSL + Sbjct: 597 LRYQDIVILLRSPGSNG----QVFVDRLTQMGIPAHITSGKGYFDTVEVSRFLALLSLLN 652 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 +R + A++ V F TE+ L ++ S + + Sbjct: 653 NRQDDRSLAAVMLSHVFGEPF--TEDQL-----YLIRSAYPRLTTGQDRGDESRDIQNAC 705 Query: 523 TWR--FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 W + G + Q E L L + +L R + Sbjct: 706 LWESLEAMESYSRGILAGEKEDSDQRPGHLLE---LDTSLPQKVLDFCDRLEAARARI-- 760 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ-WQAIIAEGLGAQYGDAVPLSLLRD 639 L ++L+ + T I + ++ E + + L + Sbjct: 761 PYTPIHRL--IEELLDETAYLNYVTALPGGQIRRANLLKLVDEAIRFEGSSYRGLYRFMN 818 Query: 640 ELAQRLD-----QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 + + V I ++ + + + VV + G+ + + + Sbjct: 819 YIQKLRTYNVDLSAAELIGEEDDAVRITSIHKSKGLQYPVVFVCGLGQ-KFNMRDSSGDM 877 Query: 695 DL-----MSQKPKRGDR------------------SRRDDDRYLFLEALISAQQKLYISY 731 + +S + + + + ++ + AL A++KL +S Sbjct: 878 LIEMDLGISLRTRNAAKRTMSDSLFHRAVSDQRKENSLAEEMRVLYVALTRAKEKLILSG 937 Query: 732 IGRSIQD 738 +++ Sbjct: 938 SLSRLKE 944 >UniRef50_A2RH77 ATP-dependent helicase/nuclease subunit A n=4 Tax=Lactococcus lactis RepID=ADDA_LACLM Length = 1203 Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 67/534 (12%), Positives = 143/534 (26%), Gaps = 117/534 (21%) Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 +Q +I + A E +N + DS + E++ + ++ Sbjct: 503 VQGNISDYPVEAEKDFYPELLLYKENTSEEEIEDSEVKISDG-----EIKGAAQEIKKLI 557 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS-DRRARQSHPVLEAFIS 456 + + P+DI ++V S + I+ + S +P + R + + Sbjct: 558 --EYGVEPKDIAILVRS-KSNNNKIEDILLSYD----IPVVLDEGRVDFLKSMEVLIMLD 610 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 +L D+ ++A+L P+ F E+ L + Sbjct: 611 VLRAIDNPLYDLSLVAMLRSPL----FGFNEDELTRI----------------------- 643 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG-----HLASLLMQL 571 W +L + G EL+ L + + Sbjct: 644 -----------------SVQGSRDLRFWDKILLSLKKEGKNPELINLSLEQKLKAFNQKF 686 Query: 572 NIWRRGLAQERPLEE--WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 WR+ L + P+ W + E + Q + Y Sbjct: 687 TEWRK-LVNKIPIHRLLWKIYTETYYFDYVGALKNGEMRQANL-QALSVRAESYESSGYK 744 Query: 630 DAVPL-SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM----NDGV 684 L+ + Q D ++ + V + T + + F V L+ + ND Sbjct: 745 GLFKFVRLINKFMEQNNDLASVNIKLPQNAVRVMTFHKSKGLEFDYVFLMNLQSRFNDRD 804 Query: 685 Y-----------------------PRQLAPLGFDLMSQKPKRG-------DRSRRDDDRY 714 P + + L+ + R+ ++ Sbjct: 805 LKEDVILSREHGLGMKYIADLKAEPDVITDFPYALVKMETFPYMVNKDLKQRAALSEEMR 864 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 + A A++KLY+ + + EL D + D+ N Sbjct: 865 VLYVAFTRAKKKLYLVGKIKDTDKKAGL-------ELYDAATLEGKILSDKFRNSSRG-- 915 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 H + P + Y ++ L + +F + + + Sbjct: 916 -------FQHWILALQNATKLPMKLNVYTKDELETEKLEFTSQPDFKKLVEESE 962 >UniRef50_Q6CK19 KLLA0F14256p n=1 Tax=Kluyveromyces lactis RepID=Q6CK19_KLULA Length = 966 Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 77/485 (15%), Positives = 149/485 (30%), Gaps = 96/485 (19%) Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 I L+ + S+Q L F + I++ I RA N++ F + Sbjct: 290 ISLIDNYRSAQTLLDFSEKVIG---QQIKNRIKRDPLRAQFNHNVKPFYSYFQRTDTFEN 346 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL-TPRDIIVMVA------DIDSYSPFIQ 423 S L +L L+ P L D+ +++ DI+ Sbjct: 347 SES-------------NSLAHEIL-YLKSLPGLFKFSDVAILLRTRRQVYDIE------- 385 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 A +PY I + + F+ L + S +L L A Sbjct: 386 ----KALIKNRIPYRIVNAKGVWEKKESGIFLDYLRIISQDSCSLAILRCLQF----ASN 437 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 I +R ++ ++ R ++ Q L R + +E + + Sbjct: 438 GIGSTTIRKIKSAFDKDRCRNSLEVLKELCESNDLNNQK-ISAALKRFI--NLVEKLKLK 494 Query: 544 WQSVLPYDESSGLIAEL--VGHLASLLMQLNIWRRGLAQERPLEEWLPV-------CRDM 594 + YD L AE+ +G L S+L ++R L+E+L ++ Sbjct: 495 CEEYDTYDGLKELFAEIYMLGELYSVLKISKETINEQIKDRSLKEFLQTEHQNMFKVYEL 554 Query: 595 LNAF----------FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 + +A + LI++ + + +SL E Sbjct: 555 FTEYELDQNDEHIMIQENAADPNDLALIKENFNSNDLNFFEVITFFTKSISLYSSEEENT 614 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG----------- 693 + L V + T+ + + + VV + +N+G+ P Sbjct: 615 ENSLDKLANHLQERVTVSTIHAAKGLEWPVVFIPSINEGLIPFTEQSARQRLEDLAELRR 674 Query: 694 -----------------FDLMSQKPKRGDRSRRD-------DDRYLFLEALISAQQKLYI 729 FD + ++ + + D ++R +F AL A+ LY+ Sbjct: 675 DGEACNDLNNCSMGSGEFDNIKEELRGKESDLIDDLETTLNEERRIFFVALTRAKDLLYL 734 Query: 730 SYIGR 734 S G+ Sbjct: 735 SSSGK 739 >UniRef50_A6SVL7 Uncharacterized conserved protein n=2 Tax=Oxalobacteraceae RepID=A6SVL7_JANMA Length = 892 Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 74/631 (11%), Positives = 170/631 (26%), Gaps = 127/631 (20%) Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 E ++ + H+ + E + ++ L++ T +I ++ D Sbjct: 255 PEMLDDVVPADLPLATPPGLSLYAAHNLEAEAKAGAQTIMDWLQQGKT----NIAIVAQD 310 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRR--ARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 + I+A+ A ++D + A S L L +R + +L Sbjct: 311 -RVVARRIRALLERAQ------VIVADETGWKLSTTRAAAALASWLELVAARAETIALLD 363 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 L P + A D + + + + + G Sbjct: 364 FLKSPFVFANTDNKADLVMASELALRRANVLGGW-------------------------- 397 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 E G ++ +++ L G ++ + L +W+ + Sbjct: 398 -------------------ELVGDALTVIPAAQNMVKLLAQQATGFSKGKTLCDWITASQ 438 Query: 593 DMLNAFFLPDA-ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 L+A + A + + A + Q Q I + + + R L +L+ Sbjct: 439 QTLDALGMRGALQADGAGAQVLQLLQDIEQDCTAVGH--VFSFAEWRAFLNLQLEATAYV 496 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF--DLMSQKPKRGDRSRR 709 Q V + L R F V L+G + P Q F +++ ++ R R Sbjct: 497 QLNRDRRVVMLPLNGARLRSFDAVLLVGADAEHLPSQPTETLFFANVVRRELGLATRESR 556 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 + + L++A +++ +S+ ++ S ++ L + ++ Sbjct: 557 QRQQLRDVTELLAANEQVLMSWQA--HKNGEPNPVSPWIERLELSLARAGLPKIARHHVG 614 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP 829 LT P Sbjct: 615 IAPRHLTPVPLTMPAP-------------------------------------HAAALRP 637 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV 889 + A P + F L ++ E S++P+ Q+L Sbjct: 638 HKLSASGYNSLVACPYQFFATRMLGLSGLDELSDMPE-------KRDYGDWLHQILAIFH 690 Query: 890 EQDDAERLFRRFRAAGDLPYGAFGEIFWET-----QCQEMQQLADRVIACRQPGQSMEID 944 + L R ++ FG ++ Q+ + ++ Sbjct: 691 TRLHEVTLAGRATLLREISDQVFGLALDKSAAALGYYARWQKAMPAYLEWLAEREAQGWH 750 Query: 945 LAC-------------NGVQITGWLPQVQPD 962 + + G + ++ + Sbjct: 751 FVLGEEKFEKILRWDDGEIILHGRVDRMDEN 781 >UniRef50_C7NJY7 DNA/RNA helicase, superfamily I n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NJY7_KYTSD Length = 1119 Score = 76.2 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 94/646 (14%), Positives = 165/646 (25%), Gaps = 110/646 (17%) Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V+ + V A LPY + P + +LL + D + Sbjct: 406 AVLCRKRSQF-----PVVTEALEAAGLPYEVVGLGGLLLVPEVADVRALLGVVDDPTRGD 460 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 ++ LL P + L L W E RWG+ R + + L Sbjct: 461 HLMRLLTGPAAR----LGAADLVGLHAWRRELERRWGV-----RSPGDEGSAERRDHQQL 511 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 LL + + W S A L ++ L RG+ + + E Sbjct: 512 AVTLLDAVLTPVEAGWTGPQGEAVSDLARARLASLAEAVTQCLGAQHRGVGELALVAEQA 571 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 L + A + + +A A + LS L L+ +Q Sbjct: 572 LGVDVELASRTDVPPWRARAH---LEAFHEHVATFAEAGTREP-SLSALMGWLSAA-EQH 626 Query: 649 RISQRFLA-----GPVNICTLMPMRSIPFKVVCLLGMNDGVYPR---------------- 687 + A V + T+ + + + V + G+ G +P Sbjct: 627 EGALEPGAVEVDPSAVQVLTVHASKGLEWDAVWVPGLVAGTFPSGTGTVRPEGPEWVARP 686 Query: 688 ---------QLAPLGFDLMSQKPK------RGDRSR------------------RDDDRY 714 L F L P D + ++R Sbjct: 687 ATDSAWWAPASGMLPFALRGDAPSLPEWSLPADPDKADFETAMKDFARANGERGLQEERR 746 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFP---SVLVQELIDYIGQSHYLPGDEALNCDE 771 L A+ A++ L++S S + P S + E++D ++ E Sbjct: 747 LAYVAVTRARRLLHLS----SAVWGTSAAPTPTSDFLLEVLDDCAPGTWVEMPPTDPVPE 802 Query: 772 SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET 831 + R P+ A + + Sbjct: 803 NPVTAT-------PRTALWPRPEAEDLEHHAHAAAAAEVGLALETAPGSEPGWTGLAED- 854 Query: 832 VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF------ILEGLSRYQINQQLL 885 E L RF +RL + R PD EP L L+R ++ L Sbjct: 855 -SREHLLRFRQD-------VRLLLAERDAAD-QPDIEPLRHVSTSSLVALARDPGARRFL 905 Query: 886 NALVEQDDAERLFR----RFRAAGDLPYGAFGEI--FWETQCQEMQQLADRVIACRQPGQ 939 V A + ++ + E +R + Sbjct: 906 ARPVPTPPARAARQGTDFHAWVESQWAPARLFDVPDLPQESQGEWDAHEERDAQEERAAP 965 Query: 940 SMEID-LACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 D LA +G ++ P + + W+E Sbjct: 966 GAPQDGLALDGPRLRTRAPGEADLRRFQEHFVASEWSGRTPTWVEL 1011 >UniRef50_B8DWI6 UvrD/REP helicase n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DWI6_BIFA0 Length = 1378 Score = 76.2 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 51/379 (13%), Positives = 113/379 (29%), Gaps = 28/379 (7%) Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 L + + + + A A + R+ + ++ + ++ + +EV+ + + Sbjct: 420 LTKVLRRVEQRPSSANAQEVPVQPLRNVDDGSVEVDEGTLAVLGFQTRGQEVDAVTRFVK 479 Query: 395 AMLEEDPTL-TPRD--IIVMVA---DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 +E+ P D + V+ + Y + V + R L A Sbjct: 480 QSVEQYGDACKPGDSPVAVLFRGKKSMALYEDQLSQV--TLRDGRPLRVRAVGLSAMLDR 537 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR---WG 505 P ++ ++LL + + ++ LL P R+ + L+ L + + Sbjct: 538 PEVQDVLALLKVVGDHTDANALMRLLATP----RYALGALDLKRLARRAADLNTEYRFRT 593 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 + + + P R V E++GL E + Sbjct: 594 LVEAGLAPAGTPKREWGALVRQYARNAPNMVYLIDMLLRDDVEAQLEAAGLSDEGRAGVM 653 Query: 566 SLLMQLNIWRRGLAQE-----RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 + ++ + + Q E L + D++ A L A + A++ Sbjct: 654 QAVRAMHRVQDEMYQPLAQVIHTAVEALNLDVDLMVASSLRTGGAPAPRDAVRAAIDALL 713 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP--------VNICTLMPMRSIPF 672 A LD S A V + T+ + + + Sbjct: 714 ETVNTYTSEIAQQQRPTLRGFLTYLDMANGSDMPEAAADLGDEPADVVLMTVHQSKGLEW 773 Query: 673 KVVCLLGMNDGVYPRQLAP 691 V ++GM G +P Sbjct: 774 DAVAIVGMQQGAFPSNKGD 792 >UniRef50_A5N879 ATP-dependent DNA helicase n=2 Tax=Clostridium kluyveri RepID=A5N879_CLOK5 Length = 670 Score = 76.2 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 56/182 (30%), Gaps = 36/182 (19%) Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 ++ L + L + + ++ + I + + +I Sbjct: 457 ERVKFILDKLEYKDYLHKHCEKLASNMEEYYYVIEQ----FKQICEDFTSIYEFLKHV-- 510 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + L + L +E V + TL ++ + FK V ++ N+G P Sbjct: 511 ------ETAEEFLHKNLQEE--------DAVILSTLHGVKGMEFKNVFIINCNEGSIPHS 556 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 + L + +++R LF + A LY+ S S + Sbjct: 557 NSIL--------------NNLEEERRLFYVGITRAIDNLYL--CSTSTIKGRAVEVSRFI 600 Query: 749 QE 750 +E Sbjct: 601 RE 602 >UniRef50_C8PTM7 ATP-dependent DNA helicase PcrA n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PTM7_9SPIO Length = 809 Score = 76.2 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 48/145 (33%), Gaps = 18/145 (12%) Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L+ + + A V + T+ + + F+ V + G+ +G++PR Sbjct: 627 LTSFLEHIELDRSLAETDAG--ADAVQLITIHNTKGLEFRNVIITGLENGIFPRNDTIGE 684 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQEL 751 +++R L A A+ LY++ PS + E+ Sbjct: 685 D--------------MEEERRLMYVACTRAKDALYMTSCAARRMYGKLSFMEPSRFLAEI 730 Query: 752 IDYIGQSHYLPGDEALNCDESEARV 776 + P ++ + EA + Sbjct: 731 DGDLVDVAGQPVAGFISPADEEAAL 755 >UniRef50_D2SFF1 UvrD/REP helicase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SFF1_9ACTO Length = 1120 Score = 76.2 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 96/670 (14%), Positives = 176/670 (26%), Gaps = 127/670 (18%) Query: 380 HSPQREVEVLHDRLLA-MLEEDPTLTPR-D-----IIVMVADIDSYSPFIQAVFGSAPAD 432 + +E E L DRL A EDP L PR D V+V P I A A Sbjct: 422 PTVAQETEALADRLAACWRGEDPVLPPRADGRPPTTAVLVR-TRKQLPGIAA----ALRA 476 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 R LP + P + ++ L++ + + LL AR+ I L Sbjct: 477 RGLPVTVVGLGGLLEVPEVSDVVATLTVLVDPSAGDAMGRLL----TGARWRIGPRDLAA 532 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L D ++ + + + + L + A A Sbjct: 533 LESRARALVHSRKPDREDDDDTAPRPSERGSIVEALDDLGDPSAFSPAAY---------- 582 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERP-LEEWLPVCRDMLNAFFLPDAETEAAMTL 611 L L +L R L + P + + + + + + Sbjct: 583 ---------RRLRRLAAELAHLRGRLGESLPDMVDDVARVLGLETELASAPGVSPGSARA 633 Query: 612 IEQQWQAIIAEGLGAQYGDAVP--LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 A+ AE ++P L LRD + E + + T + Sbjct: 634 HLDALHAVAAEFTELAELPSLPAFLGYLRDAEERERGLEPGEVAVDPESIQLLTGHSAKG 693 Query: 670 IPFKVVCLLGMNDGVYPRQLA----------PLGFDL----------------------- 696 + + VV + GM +P + + DL Sbjct: 694 LEWDVVAVPGMTADQFPSRTDTSDSWVKDPGAVPVDLRTTDREELPQLRLPVPGSGDQAA 753 Query: 697 ----MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN-SERFPSVLVQEL 751 + + R ++ L A+ A+ L S ++ PSVL+ + Sbjct: 754 VRAALEDYVEEWKRFGEAEEIRLGYVAVTRAKHLLLCSGSWW--REGVKPNGPSVLLDTV 811 Query: 752 IDYIGQSHYLPGDEALNCDE--SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR----- 804 + A +E + ++ + P P + + Sbjct: 812 RRACSAGAGVVVAWAERPEEGATNPALEEWPVGMWPADPLSPPRRRALTAAAELVAGAAP 871 Query: 805 -----------------EWLPAASQAGKAHSEFVQP-LPFTLPETVPLETLQRFWAHPVR 846 W+ A + +P + LP + + L P Sbjct: 872 HPLDAAAVLGTGDPEVERWVRDADLLLRERRRIARPTVEVPLPSHLSVSELVTLRRDPAE 931 Query: 847 AFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGD 906 RL+ + + L +LL+ + Sbjct: 932 --LARRLRRPMPAAPAPLARRGTAFHAWLEERFSVARLLDLDELPGSGDESAA------- 982 Query: 907 LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ-SMEIDLACNGVQITGWLPQVQPDG-- 963 P GA + RQP + + + + + G + V DG Sbjct: 983 -PDGALTALQEAFLASPWAD--------RQPVEVEVPFETPLGPLTLRGRIDAVFDDGGG 1033 Query: 964 ---LLRWRPS 970 ++ W+ Sbjct: 1034 GFEVVDWKTG 1043 >UniRef50_D1B4A6 Putative uncharacterized protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B4A6_SULD5 Length = 780 Score = 76.2 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 64/489 (13%), Positives = 147/489 (30%), Gaps = 80/489 (16%) Query: 568 LMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 + +L I L + + W + ++ +E EA + ++ A Sbjct: 322 VKRLKIDEEKLVTCKTV--WHQKLAPQSAMDFIRSLLSEKEAQKGVFKEALFAFEHFLNH 379 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 A ++ + L RL G + + ++ R + +K V ++ ND Sbjct: 380 A---PSLRFEQVIKLLLNRLSVLSEDDV-RGGKITVMGVLETRGVAYKGVIVVDFNDEFV 435 Query: 686 PRQLAPLGF---DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 P++ + F D+ + R R + RY + + A + + + N Sbjct: 436 PKRSSKDLFLSSDVRAHAGLPTKRDRENLQRYFYHQLFSRATK------VAIAYVKNETA 489 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 PS + E M FD Q + + ++ Sbjct: 490 MPSRFLDE------------------------------------MGFDTQ--RMADEGNF 511 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 A + F+ + L+ + + +F+ + S Sbjct: 512 APLLWKINAPRTLYTQAFIDAPYDLKAAPLSATKLKTLLSCQRQFYFRYIAKFKEAKMPS 571 Query: 863 EIPDTEPFIL---EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET 919 D + + + L + Q LL E L ++ G F +++ E Sbjct: 572 NTIDEQSLGIVLHKVLEEAILTQNLLEEKHLFAKIEELLKKESHNDVW--GYFADVWLEK 629 Query: 920 QC----QEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDG----LLRWRPSL 971 E+++ D + ++ + G + G + ++ ++ ++ Sbjct: 630 LRPFICNEVKRFEDGFLVYKKEFSH---SVLYQGFVLEGQIDRIDRKEDRLYVIDYKSGK 686 Query: 972 L---SVAQG-----MQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQL 1023 + + QL L+ A G + + K+G P E+ L + Sbjct: 687 VPTTTEKNLENTVDFQLLFYSLIAGALGEVHGAYYYDLKEGVLIEEPFLEEK-KVLLEEK 745 Query: 1024 IEGYREGMS 1032 + + + M+ Sbjct: 746 LRLFAKPMN 754 >UniRef50_Q2NK11 UvrD helicase n=2 Tax=Candidatus Phytoplasma asteris RepID=Q2NK11_AYWBP Length = 761 Score = 76.2 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 60/547 (10%), Positives = 150/547 (27%), Gaps = 105/547 (19%) Query: 256 YLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKL----GRDYI 311 K R++++ FE ++ L + D + LL + + + Sbjct: 185 QKEKNYQREKKYEFEMPIKVKYQIFLQNNNLVDFDDLILYTHQLLQENANVRVFYQQKFQ 244 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDIL----------ELENRAVAGVNIEEFSRS 361 YLL ++ Q+ D F LL +I + Sbjct: 245 YLL--VDEFQDTD-FFQYQILTLLAKEHQNIFVVGDPDQNIYSFRGARFENSQLFLNKFK 301 Query: 362 DNKRPLDPLDSS-----------ITFHVCH----------------------SPQREVEV 388 L+ S I ++ H + E Sbjct: 302 PKIAFLEENYRSSKNILDKANLLIKYNKAHLFKKNLKSTKSGGEPVICKFFADYKEETRY 361 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 + + ++ + + +D ++ + + +PY + + Sbjct: 362 IAKTIQNLVLQGV-YSYQDFTILYR-----TNILGRPLEEKFLANNIPYQVFGGASFYQS 415 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 +++ F++ L+ + + +++ P + I L +L + E I Sbjct: 416 KLVKDFLAYLNFIANPSQDFNFKRIINTP----KRGIGTTSLLHLEKLAQEKKI------ 465 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 T L + +A+ + + + L +L+ L Sbjct: 466 --------------TLFDTLKYLDQTPIQPNAKTKLNELKKL--ITNLRQKLINDSFDCL 509 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 + + +E + ++ + G+ + Sbjct: 510 SDIITYIDE-----KIEYCRKNDETCKMQSIKDSDSDLYYIEELKSVFMQAEKNLEGSIF 564 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLA--GPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 L + +Q + + V + T+ ++ + F+VV + D + Sbjct: 565 EKLTQLLDQISLYNETNEQTEQDSKNPSKNDRVKLSTIHKVKGLEFRVVFITAFEDIFFD 624 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FP 744 +S ++ R L A+ A++KL+++ + + P Sbjct: 625 CNQKE--------------KSDLEESRRLAYVAVTRAEEKLFLTGAYQRFSYGKQIDSQP 670 Query: 745 SVLVQEL 751 S +QE+ Sbjct: 671 SRFLQEM 677 >UniRef50_C6XGC2 DNA helicase II n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGC2_LIBAP Length = 685 Score = 76.2 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 48/409 (11%), Positives = 120/409 (29%), Gaps = 78/409 (19%) Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 N + F + + D+ ++ HV S E+ + + ++ ++ +I ++ Sbjct: 322 SHNKQRFDKKLFTQRDCHDDAKVSIHVSQSDNSELSTIIQE--IINIQNTGMSLNNIAIL 379 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 V + + F A ++ +P+ + + +A + L ED Sbjct: 380 VR-----TSWQTRKFEDAFLEQEIPHKVIGGSFYDRQEIRDAL-AYFRLVCQEHRDEDFK 433 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +++ P + I +E L ++ ++ I Sbjct: 434 RIINCP----KRGIGKESLHKIQYHASQHHI----------------------------- 460 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 Q+ +S ++ L + + + W + P + Sbjct: 461 ----------SLLQASEKLIDSGQFRPQIRQSLQNFVKDIRRWNNCSKKMDPAPIANMIL 510 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 + ++ + +++ + + L L + S Sbjct: 511 EQSGYMAMWKNNKSSEKSQERLDNLRELLSIIEKHETLEGF-------VLQAPLRENLGS 563 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 + + I TL + + F V + G G+ P QL+ ++ + Sbjct: 564 FIPDSNCIQIMTLHAAKGLEFDTVFISGWEQGLLPHQLSINEGNV-------------EG 610 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDN-------SERFPSVLVQELID 753 +R L + A++K ++ Y + S + EL D Sbjct: 611 ERRLAYVGITRAKKKCHLFYTINRRTHDFTRVERYQPSQVSQFLLELYD 659 >UniRef50_B0RE31 Putative DNA helicase n=2 Tax=Clavibacter michiganensis RepID=B0RE31_CLAMS Length = 640 Score = 76.2 bits (186), Expect = 8e-12, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 18/156 (11%) Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNIC 662 E + A+ + AI+ G R + L+++ V + Sbjct: 497 PEQQGAVRDRWESLDAIMGLAERMPAGST-----FRAFTDELLERQAGQHEPTVSAVTLA 551 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 TL + + ++ V L+G+++G+ P A D++R L + Sbjct: 552 TLHSAKGLEWEHVYLMGLSEGLVPISYAQT-------------LEAVDEERRLLYVGITR 598 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 A+ L +S+ + +R PS + EL I Sbjct: 599 ARSGLRLSWSRSGPHRSGQREPSRFLAELDTRIAGG 634 >UniRef50_C4Z0W6 Putative uncharacterized protein n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z0W6_EUBE2 Length = 621 Score = 75.9 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 60/409 (14%), Positives = 139/409 (33%), Gaps = 86/409 (21%) Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 L +RAVA N + + + + + S+ + +S E + + ++ D + Sbjct: 284 LASRAVAEENEQRYYK--DITTYNSQGDSVFIYEFNSLNDEKAFVTSEIRRLI--DSGIA 339 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 DI V+ + I ++ S +P D A Q Sbjct: 340 ADDIAVLSR-----TNVIGNMYMSRLESDGIPCC--DYSAVQD-------------VYEH 379 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 ++S+D+L + + + + E + +LR + IR+ + PA Sbjct: 380 WISKDILTYIRIAL------GSRERMDFLR--IINKPIRY----ITRSYITQPAD----- 422 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 L R +E E + +++ ++ + + + Sbjct: 423 INALKR----------------SCERNEQMSEQVEKLASDINMIRNMSPFAAVNYIRKGI 466 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 + R+ + D E + + + LS D + + Sbjct: 467 -GYDEYIRNYIYE-HKADKEE------LYNVLDELAHRA-----SRYMSLSQWLDGITEY 513 Query: 645 LDQ-ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 L Q + + V++ T+ + + +K+V ++ + +G+ P A L Sbjct: 514 LKQCDTQRRNNTVEGVHMLTMHGSKGLEYKIVMVMDVCEGIIPYNKAVLD---------- 563 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 + +++R LF A+ A++KLY+ + ++ R S ++E++ Sbjct: 564 ---EQIEEERRLFYVAMTRAKEKLYLLSPKQRYNKDTTR--SRFLEEIL 607 >UniRef50_C7NJY3 DNA/RNA helicase, superfamily I n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NJY3_KYTSD Length = 704 Score = 75.9 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 20/145 (13%) Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTL 664 + Q ++ + + +L LD+ Q A V + +L Sbjct: 439 QRERWESLQALVSVAEDLAAVNPDARMG------DLVAELDRRSAEQHAPAMDGVTLASL 492 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + + + VV ++G ++G+ P LA ++R L + A+ Sbjct: 493 HAAKGLEWPVVFIVGCSEGLMPISLART-------------PEAVAEERRLAYVGITRAE 539 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQ 749 +L+++ SER PS + Sbjct: 540 DRLFLTRARGRAGARSEREPSRFLA 564 >UniRef50_A9BHB1 UvrD/REP helicase n=8 Tax=Thermotogaceae RepID=A9BHB1_PETMO Length = 706 Score = 75.9 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 105/344 (30%), Gaps = 72/344 (20%) Query: 390 HDRLLAMLEED--PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 D ++ ++E+ L +DI V+ + V + +PY I Sbjct: 389 ADAVVKIIEDKLKEGLDYKDIAVLYRSHS-----LSMVLQQKLDSKGIPYRILSGLRFIE 443 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID 507 ++ ++ L + ++ +L + Sbjct: 444 TAHIKDILAFLKVLNNPLDKISWSRILKL------------------------------- 472 Query: 508 DDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567 P G T + G +G Q + S+ L + + Sbjct: 473 --------FPGIGNKTASKIYEEIETGIGKSPERG--QGEENDNISNILKETEINKFKTP 522 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCR-DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 L L +E +E + D + + + +++ I + Sbjct: 523 LELLTKLFDN--KESSPDELIDTIYKDFYQEYSFLTYADSKSRNMDIERFSEIASRYDSV 580 Query: 627 -QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 + + + LS + D++ + + T+ + + +KVV L+ +N G + Sbjct: 581 SAFIEDLTLSEEIGVIPASRDKDE-------NKLTLTTIHGAKGLEWKVVILISVNPGDF 633 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 P + ++ K + D++ LF A+ A+ +LYI Sbjct: 634 P--------NGLAIKE-----QKLDEEERLFYVAITRAKNELYI 664 >UniRef50_C6HZQ0 UvrD/REP helicase n=3 Tax=Leptospirillum RepID=C6HZQ0_9BACT Length = 647 Score = 75.9 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 49/419 (11%), Positives = 126/419 (30%), Gaps = 84/419 (20%) Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 + + I+E +R + +D+ T +S Q + + R+ L Sbjct: 297 VANRIIEQNSRQIPKTLYSPLPEADHP----------TLVRMYSDQDQARYITTRIRRAL 346 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 + P +I V+ + ++ + + +P+ ++ ++ +S Sbjct: 347 DRGQE--PSEIAVLYR-----AHYVSLSLQLSLSRAGIPFHLTSGLKFFEQAHIKDILSW 399 Query: 458 LSLPDSRFVSEDVLALLD-VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 L L ++ + +L VP + + + ++ + + + L Sbjct: 400 LRLLENDRDAMAWRRILRMVPRVGRK------TAEKIEALLSRA-------EAPRKALGD 446 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 PA + + IA + + L + Sbjct: 447 PAFLK--------------------------AAPASARPGIAGIAERFSQLAER------ 474 Query: 577 GLAQERPLEEWL-PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 R + + + + + + E + + I++ + Sbjct: 475 REKNPRDVMDLVGTILATGYHDYLYETFEDPESRE------EDILSFAAQIPPETDLA-D 527 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 + + E +SQ V + T+ + + + V LL + +GV+P + + Sbjct: 528 FMAELALLEAGGEELSQEEQKNRVVLSTVHQAKGLEWDTVYLLSLAEGVFPSSRSAETDE 587 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ-DNSERFPSVLVQELID 753 + ++ R LF A+ A+ L + + S PS + E+ + Sbjct: 588 EIEEE------------RRLFYVAVTRARHDLVLCVPQVVGRGFGSPAPPSRFLGEIGE 634 >UniRef50_Q88U41 ATP-dependent helicase/nuclease subunit A n=3 Tax=Lactobacillus plantarum RepID=ADDA_LACPL Length = 1249 Score = 75.9 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 62/485 (12%), Positives = 142/485 (29%), Gaps = 89/485 (18%) Query: 386 VEVLHDRLLAMLEEDPTL-----------TPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + ++ ++LA+ +D + D+ ++V + I VF + Sbjct: 560 ITMVAQKILALKAQDKPIYERANGEYRPFRYSDVALLVPTRNHNLTIID-VFKRY----H 614 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P ++D + + ++LLS+ D+ + ++A+L P++ + E L YLR Sbjct: 615 IPVVVNDAQNYFQTTEIRIMMALLSIIDNPYQDIPLVAVLRSPIV----GLDENQLVYLR 670 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 I + + H + G A E + + Sbjct: 671 -----------IQNKTSDYFQAVQDFYHHYP-------TGPATEYGDQVYAKIET----- 707 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEE-WLPVCRDMLNAFFLPDAETEAAMTLIE 613 L QL +R + + + W R + + + Sbjct: 708 ------------FLTQLTEFRDLARRNQIVTLIWQIYERTGFLDYVGGMPAGKQRQANLH 755 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 ++ G+ G + +R + D A VN+ T+ + + + Sbjct: 756 ALYERAYTYEQGSFKGLFQFVRFIRRMQEKDQDLAAAVAETDAEAVNVMTIHGSKGLEYP 815 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKP-----------------------KRGDRSRRD 710 V+ ++ M D + + L + + + R Sbjct: 816 VIFVMDM-DKQFNQTDTRSSALLDREAGIGITYLDPETRVKYPTLPQVVTKQVVSKKMRA 874 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 ++ A+ AQQ+LY+ + I +E+ + +A Sbjct: 875 EEMRKLYVAMTRAQQQLYLVGTIKDIDTATEK--------WRQAFASDGRVLSAQARIAA 926 Query: 771 ESEARVKAHLTCLHT-RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP 829 ++ H + + E + A +E + + T P Sbjct: 927 TNQLDWVGMAVMRHPAMKAYWGDEWPNYELTDDPTKLAVELGDATTVLAEQSEAVTDTQP 986 Query: 830 ETVPL 834 + + L Sbjct: 987 DALEL 991 >UniRef50_C2CUY3 UvrD/REP helicase n=1 Tax=Gardnerella vaginalis ATCC 14019 RepID=C2CUY3_GARVA Length = 1390 Score = 75.9 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 50/396 (12%), Positives = 120/396 (30%), Gaps = 64/396 (16%) Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVL---HDRLLAMLEED 400 + +R + ++ E K D + +I S E++ + +++ E+ Sbjct: 451 QNASRRFSSIDDREVQVETLKPKEDASNGTIAALFMPSQAEEIDAVVRFAKKIVEKYGEN 510 Query: 401 PTLTPRDIIVMVA---DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 P L P+ + ++ ++ Y+ +++ + +I + P ++ +SL Sbjct: 511 P-LEPQ-LAILFRSKANMPKYAEKLES--------AGIRTSIVGYSSLIEKPAVKDVLSL 560 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L + S ++ LL P RF ++ + L L N + + + + L Sbjct: 561 LKVVQDHSDSNSLMRLLATP----RFALSTDDLGALAAIANSANTEYLYNIYSSAGLLEA 616 Query: 518 ATGQHTWRFGLTRM---------------------LLGYAMES----AQGEWQSVLPYDE 552 + W + + L M + Sbjct: 617 DLPKSQWDSAVRNLRNKANSGEISGQVINIYGGVYLADLIMRDFSTKNDQWVNQMQQKLS 676 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 G A V L+ +L + +R + ++ + ++ + + I Sbjct: 677 IGGFDA--VKRLSKILHNVEGIQRN-SLTNVMQAAVQALNVDIDTAVGSALKYKDFSNQI 733 Query: 613 E--------QQWQAIIAEGLGAQYG-DAVPLSLLRDELAQR-------LDQERISQRFLA 656 AI+ + V L L + S + Sbjct: 734 MLDDMRSVLDSLNAIVETYIQEMGEWQDVSLRGLISWIDSAKNLDSQSGSSVSSSSQTEP 793 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 V + T+ + + + V ++G+N+G +P Sbjct: 794 AQVVLMTVHQSKGLQWPAVAVVGLNEGAFPSNQGDS 829 Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 48/132 (36%), Gaps = 5/132 (3%) Query: 711 DDRYLFLEALISAQQKLYIS---YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 D+R+L AL A+ ++ G S Q +R SV + E I+ I + + Sbjct: 958 DERHLMYVALTRAKFAALLTGSATSGDSAQSGRKRSASVFLNESINAIKNLNGAIKVQRC 1017 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT 827 + +E + F + Q +A E+ A Q+ + E P T Sbjct: 1018 DSNEENKTESKESEEYEEQDVF--GFIAGDDAQEFAAEFSKIAPQSDSSSLEPTLKWPCT 1075 Query: 828 LPETVPLETLQR 839 L T+ ++ Sbjct: 1076 LSSTIEKSLIES 1087 >UniRef50_UPI0001C4301E hypothetical protein BpOF4_02565 n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4301E Length = 958 Score = 75.9 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 68/622 (10%), Positives = 179/622 (28%), Gaps = 96/622 (15%) Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 + + + + D + + E+ + + + L Sbjct: 212 QQTQKELTALGFQMHAETDLSAEPAED--VDVIAASTKNEEIRAVLEEI-----RMSPLL 264 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 + ++V D + ++ +P + +++ + LL+ Sbjct: 265 YEETGIIVVDEKDGASLLRY----YAEQYKIPLNVPIKKSLDCSISFQFIHKLLT----- 315 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + RF++ L + Q G++ GID +E L Sbjct: 316 WDYSK----------TNRFEL----LPLIDQIFTLHGLK-GIDYVKAKEAFLATGD---- 356 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 + ++ +Q + ++ L QL+ L + Sbjct: 357 ----------IIHQESRELYQRIKEFNWRKSSS------FYHYLKQLSQAVIQLELDGK- 399 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY----GDAVPLSLLRDE 640 W R + + IE+ + + + + L + D Sbjct: 400 --WRQ--RQGQETRTSELKDIVFELKTIERLTELVSDYAEKLEAKHLTDLHMTLDVFADW 455 Query: 641 LAQRLDQER-ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF----- 694 + + + + R + + T + K + ++GMN+G +P G+ Sbjct: 456 VLELAKRTELFTARGSKRGIQVHTWRDIGLFEGKKMYVIGMNEGAFPAVHQLGGYVHEKD 515 Query: 695 --DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 +L + R + F + L++A+ + +Y + + N PS +++ + Sbjct: 516 LYNLPVEGALPTQEHFRHKQQAYFGQLLLAAK-SIVCTYT-KGLDPNHPHLPSPFIEQWL 573 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 G+ + S+ + + S ++L + Sbjct: 574 QKDGRECTFEARMKHSISFSKEDQIEKTAYHMGLGMKVLEPAAELVQLSQRHQYLSEGEE 633 Query: 813 AGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL 872 + + + TV + L+ + P + + LQV E + Sbjct: 634 KLEEAHQDS-----LMKNTVSITELESYARCPFKHGLERVLQVGEVKSIQE-------RI 681 Query: 873 EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET----QCQEMQQLA 928 + Q+ L+ E +++ G +P+G E ++ ++L Sbjct: 682 SPIDIGQMIHTLI---------ESIYKELDLIG-VPFGECTEEIKNEVPVLLKEKFEELW 731 Query: 929 DRVIACRQPGQSMEIDLACNGV 950 +++ + +++ L Sbjct: 732 EQIESTAFEISRLDLLLEKEKW 753 >UniRef50_D1BAW5 DNA/RNA helicase, superfamily I n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BAW5_SANKS Length = 1111 Score = 75.9 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 67/488 (13%), Positives = 125/488 (25%), Gaps = 82/488 (16%) Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V+ + P I+A A R LP + + P + ++LL + + Sbjct: 419 AVLCRARSQF-PAIEA----ALRKRGLPVEVVGLGGLLTTPEVVDLVALLEVVHDPSRGD 473 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 ++ LL P R ++ L L E G R + + + Sbjct: 474 SLMRLLTGP----RLNLGAADLHALASRSAELGRR---NRADRPVEGDVTDERSIVDALD 526 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL----LMQLNIWRRGLAQERPL 584 G+ + D G + L G L L + L + L Sbjct: 527 DLPAEGWVGPDGRSF------SDAGWGRLRSLAGMLRELRALTYLSLPELVDRAERALGL 580 Query: 585 E-EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 + E V + + ++ + A L L+ Sbjct: 581 DIEMALVAARARDDAPSTRPTADPRGRAHLDAFRDVA--ATFADTSQLATLGAFLAWLST 638 Query: 644 RLDQERISQRFLA----GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG------ 693 +ER R V + T+ + + + VV + G+ DG +P Sbjct: 639 AQQRERGLDRPQGAPDPEAVQLITVHASKGLEWDVVAVPGLVDGAFPSTRTTGDKGPTSS 698 Query: 694 ----------------------------FDLMSQKPKRGDRSRR------DDDRYLFLEA 719 D + D R ++R L A Sbjct: 699 GWLTGLGQLPFPLRGDARDLPELSLAGADDSAELNARLVDFRERCGEHEVAEERRLAYVA 758 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 A+ L ++ PS+ + EL + + + ++ Sbjct: 759 FTRARSDLLLTGAWWRSAT-KPSTPSLFLTELHEAGVLAEFTVAEQPEPG---------- 807 Query: 780 LTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQR 839 + R P+ P + AA A + + + L+ L Sbjct: 808 --TSNPREDLTPEALWPPVDEPADGPEGSAAEAADGSATLREPLELLRRSRDLVLDALVD 865 Query: 840 FWAHPVRA 847 HP Sbjct: 866 VAQHPAST 873 >UniRef50_O26611 DNA helicase II n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26611_METTH Length = 683 Score = 75.9 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 84/252 (33%), Gaps = 15/252 (5%) Query: 485 ITEEGLRYLRQWVNESG-----IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 E + Y+ ++ + I + +++ + T + R+L E Sbjct: 390 FDREEILYIMHLLHHTRNERRKIIRKLKYEHLEGEFMDLTPGS-----VNRILD--MDEE 442 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 + + + + + L +L ++ L + + E +L Sbjct: 443 ELRGLREHREFRGAGFTDPDDIRKLVALNRLIDSDLGVLERYYEILELTEYPHRLLERGD 502 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 E + + L + +R ++ R+ + V Sbjct: 503 DESREKLYNLARFSSLIKDYERISLEPGVEGLM--EFIRMAMSGRIKKYDQILLDNPYSV 560 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD-RSRRDDDRYLFLE 718 NI T+ + + F VV + + +G +PR++ + ++ +R R+ ++R LF Sbjct: 561 NIMTMHRAKGLEFPVVIICSVFNGKFPRKVRERSELELPEELRRSTMRTDEIEERRLFYV 620 Query: 719 ALISAQQKLYIS 730 + AQ L +S Sbjct: 621 GMTRAQDMLIVS 632 >UniRef50_Q31P33 Putative uncharacterized protein n=2 Tax=Synechococcus elongatus RepID=Q31P33_SYNE7 Length = 865 Score = 75.9 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 92/636 (14%), Positives = 194/636 (30%), Gaps = 109/636 (17%) Query: 351 AGVNIEEFSRSDNKRPLDPLDSSITFHVCHS---PQREVEVLHDRLLAMLEEDPTLTPRD 407 E ++ + P I + HS ++EV + + +L+++ + D Sbjct: 193 QIKLEERSPEPWLQQWIAPNPPKIAEPIAHSYRDREQEVRSVLGHVKQLLQQN--VAQSD 250 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 I ++ AD +Y P +Q + + LP + A + LL+ + F Sbjct: 251 IALLAADDRAYGPLVQQI----GWEYGLPTRMLYEIAISETRLGRWLEDLLTAIAADFDY 306 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 + + P A D + W+ Sbjct: 307 PSGIRVF-SPSFCAALP----------------------DGRQRQLRRDRPQNLAAWQTS 343 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 L + + + + EW + QL W + L + L W Sbjct: 344 LATEFSPWPLAATRTEW-----------------------VGQLRQWLQQLGLRQGLRRW 380 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 + A+ ++QQ + + + + E Q + Sbjct: 381 ---------------PQDLVALNRLQQQLKNLAEPA-----SETLTRQQWCQEFEQLIRI 420 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK---PKRG 704 R + G V + + V LG+N+GV+P LA S + + G Sbjct: 421 SRTPVQPGRGGVQLDRPEQIVGAQIGHVFYLGLNEGVWPAPLASSSLIDYSDRRQLQRLG 480 Query: 705 DR----SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 + + ++A Q S++ + DN E+ PS ++++ + Sbjct: 481 LPLPTAASLVQQAKVQWIGALAATQTAQFSWVRQ--HDNREQLPSAYLEQMG--LRSQIT 536 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF 820 D + +E R+ A T + P Q ++ A G+A Sbjct: 537 PAADSPHSPEEYRRRLLAQSTLVDDGDPIAHSAQQRSQQV--------QARLQGEAVWNG 588 Query: 821 VQPLPFTLP-ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD---TEPFILEGLS 876 ++P + + + + P R L + +E S+ PD T + + L Sbjct: 589 QLADSISIPTRPLSVTGIIQLGQCPYRWAASKLLNLQTDSERSDDPDAAMTGTLLHKALE 648 Query: 877 --RYQINQQLLNA-----LVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 Q+ + L + + A L ++ GDL F + +++L Sbjct: 649 LLTPQLKTETLPDREILLAIVETAAAHLAKQRPREGDLRQHPRWTAFQLSYVNLLERLLR 708 Query: 930 RVIACRQPGQSMEIDLACN----GVQITGWLPQVQP 961 + + ++ + G+ + G + ++ Sbjct: 709 SPNFRSPDSEIIAVEQSFEGQWQGLPVRGTIDRIDR 744 >UniRef50_B5Y6N2 ATP-dependent DNA helicase PcrA n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y6N2_COPPD Length = 696 Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 51/378 (13%), Positives = 115/378 (30%), Gaps = 91/378 (24%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 EV+ LH + +I V++ + + A A R + Y I Sbjct: 380 EVQRLHKM---------GIPYEEIAVLMR-----TRALTARVEREFATRNIQYHIIGGVP 425 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 + ++ ++ L L + + +L + L L + E Sbjct: 426 FFARREIKDILAYLRLSRNAMDRVSLKRIL----TMKKRGFGTASLEKLFNFAEE----- 476 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 ++ L AM++A V + + + L Sbjct: 477 ------------------------NKLTLLEAMKAA------VESLLFKKLSMNDYLESL 506 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 +L+ + + +A+ + ++L+ F E + E Sbjct: 507 YTLIQTI----QEIAEPSQAIYLVMEQENLLDHFRSISKSEEEYIERTENV--------- 553 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN---ICTLMPMRSIPFKVVCLLGMN 681 + ++ ++ L + + R G V I T+ ++ + F+ V L + Sbjct: 554 ----KQLISIAEESADMDDFLQRSALGTRENNGGVEGVAISTVHGVKGLEFQAVILYYVT 609 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN-- 739 DG +P L+ + ++++R L A+ A++ L I Y+ Sbjct: 610 DGFFPHSLSVT-------------TAEKEEERRLLYVAMTRAKEHL-IFYVPYKQPWGNG 655 Query: 740 --SERFPSVLVQELIDYI 755 PS ++ + + Sbjct: 656 FEQMARPSPFLRSIPKEL 673 >UniRef50_A7VW13 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VW13_9CLOT Length = 1078 Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 83/585 (14%), Positives = 161/585 (27%), Gaps = 131/585 (22%) Query: 225 QALQALGKH----IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 + LQ + K E L C+ Y + + L +R+ F Sbjct: 588 RLLQEVSKWKNGFSEEALEHPGACQEYCRRLSERKLLDFDDLLLEVLREYERDPDAFPSK 647 Query: 281 ENAGQLFNSDGEQDVGN-PLLASWGKL-GRDYIYLLSDLESSQELDAFVDVTPDNLLHNI 338 L + + + LL W K GR L + Q + F P + Sbjct: 648 PFRQILVDEFQDCNAVQFKLLRYWSKKNGR----LFVIGDPDQSVYGFRGSDPACF-KRL 702 Query: 339 QSDILELE-----------NRAVAGVNIEEFSRSDNKRPLD---PLDSSITFHVCHSPQR 384 Q + EL+ ++ KR L+ P ++ F C + Sbjct: 703 QEEYPELQAVRLKTNYRSSPEILSCALPVISHNPGGKRELEAFRPPQGAVRFLPCENGLS 762 Query: 385 EVEVLHDRLLAML--------------EEDPTLTPRDIIVMVADIDSYSPFIQA-VFGSA 429 + + + AM+ + + + +I ++ Y +A + Sbjct: 763 QGIAIAKEINAMVGGIDMLDAQSCVSSQRETSRDFSEIAIL------YRTHHEAELLEKC 816 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY ++ R H + + L + F E+ Sbjct: 817 LQRESIPYVVAGREDFLRHDKVRGLTCFFQFLSEPDDLTALAVCLKL-----LFSCPEDL 871 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L+++++ GY++ ++ Sbjct: 872 SESLQRFLSSY--------------------------------QGYSLPKKLELLENE-- 897 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 Y L L L + + LE A E E A Sbjct: 898 YRNVGVLTVSL-----PLFRSIYPLLEKKKPAKLLE----------TAALELSLEQEPA- 941 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 Q ++ + L+ + L + RF + V + TL + Sbjct: 942 ------VQKLLNTASFYSKTSELLAQLILGQ-ESDLTRSCKKNRFSS-AVTLTTLHGSKG 993 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F VV L G+N G P +G +++R LF + A+ +L + Sbjct: 994 LEFPVVFLCGVNQGNLP-------------LEAQGRMQSIEEERRLFYVGMTRAKDELIL 1040 Query: 730 SYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 S PS + E+ + + P +A + + + Sbjct: 1041 ---LSSDH------PSPFLGEIPQELLKREARPAGKAPHPAQQLS 1076 >UniRef50_D1ACL7 UvrD/REP helicase n=6 Tax=Actinomycetales RepID=D1ACL7_THECD Length = 702 Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 70/233 (30%), Gaps = 23/233 (9%) Query: 598 FFLPDAETEAAMTLIEQQWQAIIA-EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 F + A + A++ A L EL +R + Sbjct: 431 FTEQPPQGIGAARARWESLSALVRLAEDVAAADPDAALPQFVAELEERAALQH---APTM 487 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 V + +L + + + V L G+ +G P A + +++R L Sbjct: 488 EGVTLASLHAAKGLEWDAVFLAGLTEGTLPIVYAETA-------------EQIEEERRLL 534 Query: 717 LEALISAQQKLYISYIGRSIQDNSE-RFPSVLVQELIDYIGQSHYLPGDEALNC-DESEA 774 + A++ L +S+ + R PS ++ L Q+ P A + Sbjct: 535 YVGITRAREHLTLSWALSRAPGGRKNRSPSRFLEGLR---PQTFGPPAAPASRPRRRAGK 591 Query: 775 RVKAHLTCLHTRM-PFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 C + + + + S E L A + +A Q +P Sbjct: 592 GPLPCRVCGRPLTAALERKLGRCQDCPSAVDEELLEALKRWRAALAEEQGIPP 644 >UniRef50_A1U7Y3 UvrD/REP helicase n=2 Tax=Marinobacter RepID=A1U7Y3_MARAV Length = 715 Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 53/445 (11%), Positives = 130/445 (29%), Gaps = 76/445 (17%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 + I +R + + + + D + S ++ L + Sbjct: 317 NLIKHNRSRLAKKPFSAKDQGTLPEVRVSERDRDM----AQSIVDQISELRAQ------- 365 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 DI ++ + + + A ++PY++ + ++A + + Sbjct: 366 --GAEYNDIAILYR-----TNRMTTILEPALKQAHIPYSVVGGMSFYERQEIQAATACIR 418 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + + +D +AL R L+ +++ G + GI+D L Sbjct: 419 IAN---KWDDWMAL-----------------RSLQPYIDGIGKK-GINDTIKS---LQEY 454 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 ++ LL A+ A ++ L L + + + Sbjct: 455 NEN---------LLTLAIHEAPQQF---------GKAGIRLQAFLVEVFANTHGNADNMT 496 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 Q + +D + + + ++ E A+ + Sbjct: 497 QPELARRLVQWMKDGPMKILDREKDDVVRVKR-SDNLDLLVDEIDRAKPDC------FME 549 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 L + + + V + T+ + + + V + GM+DG+ P A + + Sbjct: 550 YLMEGPISDFVEASDDEDRVTLSTIHRSKGLEWPHVIIAGMSDGLMPLDSAKMNGRPSAT 609 Query: 700 KPKR------GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE---RFPSVLVQE 750 P + D + +++R L A A + L + + E PS + E Sbjct: 610 SPSKDQADPDDDGGKPEEERRLAYVAATRAAETLTMHHADLYHFPGGEPVVVDPSPYIAE 669 Query: 751 LIDYIGQSHYLPGDEALNCDESEAR 775 + + Q+ + Sbjct: 670 MGLQLPQAQLTNREGYQAKKPEFTP 694 >UniRef50_C4LK54 Putative ATP-dependent DNA helicase II n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LK54_CORK4 Length = 1175 Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 74/590 (12%), Positives = 156/590 (26%), Gaps = 104/590 (17%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCH-----SPQREVEVLHDRLLAMLEEDP 401 + ++ ++ D S F SP EV + DR+ Sbjct: 341 DATRHPESLRWAKEIRHQDAERLSDHSAEFGEADVRVLVSPSAEVAAVVDRVRRA-HIVD 399 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ-SHPVLEAFISLLSL 460 + +DI V+V +P +P A P++ A + + Sbjct: 400 NVQWKDIAVIVRSKSQAAPM-----RRGLLAAGVPVADDPTEIVLLEQPMVRAILQAVRC 454 Query: 461 PDS-RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI-----DDDNVREL 514 ++++ L+ P+ + G+R G D+ Sbjct: 455 AVGEDLTNDELERLVLSPIGGG---------DPITFRCILRGLRRGFMKVEFDNPVRAAE 505 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 T +G + + A+++ + D + L A + + + Sbjct: 506 LTAITTTDDEDYGRS---VFRAIDALRFILLGGELIDLTENLTAREKDLIMRVRSVIQAG 562 Query: 575 RRGLAQERPLEEWLPV------CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 + +E L + L L + ++ Sbjct: 563 QEAFYGGESVEAILWAVWDAAGLSEALANQSLRGGAVGSMADQHLDAVMSLFDAAGDYVE 622 Query: 629 GDAVPL--SLLRDELAQRL-DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 S +R + Q L R + + V++ + V + G+ + V+ Sbjct: 623 RHPHSTITSFVRFIVEQELPTGARDRRGPVREAVDVSPAHATVGKEWDTVVVAGLQEDVW 682 Query: 686 PRQLAPLGF-------DLMSQKPKRGDR--------SRRDDDRYLFLEALISAQQKLYIS 730 P D + + + G R ++R LFL A+ A++ L ++ Sbjct: 683 PSLSETGTIFRQEEFVDFLDRGVEPGRPENRRGRYDDRLAEERRLFLVAVTRARRSLLVT 742 Query: 731 YIGRSIQDNSERFP-----SVLVQELI--DYIGQSHYLPGDEALNCDE----------SE 773 +G + D+ S ++EL + SH P E+ + + Sbjct: 743 AVGPHVSDDGTVDSDADIRSRFLEELAGDQALASSHGEPDAESSDSADLRALTSSGGSQT 802 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET-- 831 + L P + R+ E + A L + Sbjct: 803 QSPLSVLPECEFPRVLSPDSLIAELRRVVESEDSSGHERHHAARQLARLALAAGDAPSRE 862 Query: 832 -------------------------------VPLETLQRFWAHPVRAFFQ 850 + ++R+ P+ AF Q Sbjct: 863 SVITAANPDHWWGVQELSTTKSLHDPETAYFISPSQVERYLECPLEAFLQ 912 >UniRef50_D0WRX3 ATP-dependent DNA helicase II n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WRX3_9ACTO Length = 667 Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 53/147 (36%), Gaps = 17/147 (11%) Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNIC 662 E A A++ + ++ EL ++ +I V + Sbjct: 430 PEGAGAARERWSALAALLKMAEEMERARGAGMAEFVAELE---ERAQIQAAPETDSVTLA 486 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 +L + + + V L+GM++G+ P LA D++R L + Sbjct: 487 SLHSAKGLEWHAVFLVGMSEGLMPISLAKGE-------------DAIDEERRLMYVGITR 533 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQ 749 A+Q L ISY + Q S R S +Q Sbjct: 534 AKQCLQISYAKGNGQR-SARKMSRFLQ 559 >UniRef50_Q04T32 ATP-dependent DNA helicase n=4 Tax=Leptospira RepID=Q04T32_LEPBJ Length = 665 Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 54/419 (12%), Positives = 124/419 (29%), Gaps = 97/419 (23%) Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSI-TFHVCHSPQREVEVLHDRLLAMLEE 399 IL L N + + + D D + SI E E + + LL ++ Sbjct: 291 AILNLANAVLQNFS----EKYDKYLFTDNENGSIPNVLQFEDELEEAEGIAEILLQ--KK 344 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 + + + + V+ + + A R +P+ R ++ +S L Sbjct: 345 EDGIPFKKMCVLFR-----AGWNSNQLELVLAKRNIPFVKFGGRKFIETAHIKDLLSFLK 399 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + + S + +L + + + +GI +D Sbjct: 400 VLVNPLDSVSWIRVLKL-------------IPGIGN-SKANGI---LDKIRKSS------ 436 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 G +LLG E+ I + + L L R + Sbjct: 437 -------GSFEVLLG-----------------ENETAIDKYISPLYHLYQ---KHRETYS 469 Query: 580 QERPL-EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 + + + +++ R +L + + + + L Sbjct: 470 EVKKVTSDFIDYYRVLLEKNYDDSKRRSEDL------------DSVLGFSLKYTSLGDFL 517 Query: 639 DELAQRLDQERISQRFLAGP----VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 +L + + +N+ T+ + + F +V +L +GV+P Sbjct: 518 SDLTMDHASLSLDKIKPDDAETDLLNLSTVHSAKGLEFDLVFILNATEGVFPSSKNTD-- 575 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP--SVLVQEL 751 +++R LF A+ A+++LY + + + + S + E+ Sbjct: 576 --------------TEEERRLFYVAITRARKELYFTRPSLAHSRSGPYYTKLSRFLSEI 620 >UniRef50_C6C0S1 UvrD/REP helicase n=3 Tax=Desulfovibrionales RepID=C6C0S1_DESAD Length = 1034 Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 48/111 (43%), Gaps = 9/111 (8%) Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR---SRR 709 R A V I ++ + + F+ V L G++DG+ P G D+++ K Sbjct: 910 RNKAEKVRIMSMHAAKGLEFEAVFLAGLDDGIVPFA----GPDILTGKISGDAPLVQENT 965 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQS 758 +++R L + A++ LY+S+ + S ++ L + + +S Sbjct: 966 EEERRLLYVGMTRAKKNLYMSHAVKRPLYGRTLMLPVSRFLKSLPEAVKRS 1016 >UniRef50_UPI000185BEF4 helicase, uvrd/rep family n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BEF4 Length = 1119 Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 59/421 (14%), Positives = 124/421 (29%), Gaps = 58/421 (13%) Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 S++ + S + + + D L D + +D+ V+V ++ A + Sbjct: 390 SAVKIAIHPSERAQRATVADY-FRRLHIDEGVAWKDMAVIVRSGAG-----ESSLFRALS 443 Query: 432 DRYLPYAISDRRARQSH-PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 +P I SH ++ A + L ++ + L P++ ++ Sbjct: 444 RAGVPVQIDPTDIVLSHQRLVRALMVALRATMNQLDDVEWDEFLSGPLV----NMDPIVK 499 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 L + GIR A Q L+G Q Sbjct: 500 ERLLR-----GIR------KADLFGGAAMTQ----------LIGILKADGLATEQ----L 534 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP-----VCRDMLNAFFLPDAET 605 + L L L L+ R L W + ++ A Sbjct: 535 ELIESLSQRERQALQVPLDLLSAAREALRDGVEATLWAIWQSTGLADHLVAASLRGGTAG 594 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR--LDQERISQRFLAGPVNICT 663 +A ++ G + + + + ++ R V I + Sbjct: 595 ASADRDLDAVMALFDFAGDRVELNPKLTVDGFIASVEEQELPIGARDRSGVERDAVRILS 654 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQ------LAPLGFDLMSQK---PKRGDRSRRD---D 711 +K V ++G+ +G +P + F + P+ S D + Sbjct: 655 AHAALGRQWKAVAVVGVQEGQWPSLGVTGSVMKQNEFIGLVDHGIEPREYINSMADALAE 714 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 +R L A+ A ++ ++ D+ PS + EL++ +G S ++ Sbjct: 715 ERRLLHVAVSRASDRVLLT--AVDSPDDVGV-PSPFIIELVEKLGNSATELAKQSEASSA 771 Query: 772 S 772 + Sbjct: 772 A 772 >UniRef50_D0LHE6 UvrD/REP helicase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LHE6_HALO1 Length = 1161 Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 17/143 (11%) Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L +ELA + + R A V++ TL + + F+VV L+G DGV P + Sbjct: 1029 DLDSFANELALEAEVDLWDAR--ADRVSLLTLHAAKGLEFRVVFLVGCEDGVLPLRWGS- 1085 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQE 750 G ++R LF + A+Q+LY+ + + E S V++ Sbjct: 1086 -----------GRAEDLGEERRLFFVGMTRARQRLYLLHARKRRWRGELCELPVSPFVRD 1134 Query: 751 LID-YIGQSHYLPGDEALNCDES 772 + D + + P + + E Sbjct: 1135 IEDQLLARGSSRPRKKPVVLHEQ 1157 >UniRef50_C0VQH4 Helicase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VQH4_9CORY Length = 1025 Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 98/676 (14%), Positives = 190/676 (28%), Gaps = 101/676 (14%) Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 D++E ++ + F R +KR + + F V REV ++ D Sbjct: 302 DLVEDKSGKTVITLEQSFRRPSDKRIIYTHTAGDNFSVIARELREVHLIRD--------- 352 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 + D++V+ + P +Q +A ++ +D + +++A + + + Sbjct: 353 --IPWEDMVVITRSLSQ-IPALQRALATADVPVHIDS--TDVVLVEQS-IVQAMLQAVDI 406 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 ED++ L + IT LR +++ + E G Sbjct: 407 VMGNGTEEDIIE-LATGPIGGADPIT---LRRIQREIGELG------------------- 443 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 + E + L + L L + R + + Sbjct: 444 ---------------------PVVRGAAGVAEDARLGEQAESVLTHLSAVIQTGREAVER 482 Query: 581 ERPLEEWLPVC-------RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 LE L + A + + G + Sbjct: 483 GDSLELILWSIWEATGLSTSKMYTALRGGPAAAQANRDLNAMMELFDVAGDYVERVKQPS 542 Query: 634 LSLLRDELAQR--LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ--- 688 L + L + R Q V + T + V L G +D +P Sbjct: 543 LEGFIEHLTSQDLPTGVRERQVVAPKAVALLTAHGAIDDEWNTVILAGADDDSWPSLGLT 602 Query: 689 ----LAPLGFDLMSQKPKRGD-----RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 DL+ + R R +++ LF A L I+ I + +D+ Sbjct: 603 GTIFDQEELVDLIDENVDPDAYIDRLRERLHEEQRLFSLVTSRATDTLVITAINPAEEDS 662 Query: 740 SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ--PG 797 PS V++L + S + +S A L T + + Sbjct: 663 PLPQPSRFVRKLEEDETFSVSTVVETDELAVKSSRPFIAELRRALTSADSSDEEKEEAAD 722 Query: 798 ERQSYAREWLPAASQ---AGKAHSEFVQPL-PFTLPETVPLETLQRFWAHPVRAFFQMRL 853 A A G A QPL P T+ ++ P++ Sbjct: 723 LLAMLADAGFSEAEPTNWWGLAGPTDAQPLREPGQPATLSPSQVESGLQCPLKMVLNS-- 780 Query: 854 QVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFG 913 V S + + +L L+ + L +AE+L + Sbjct: 781 -VTPTESSSALREGN--LLHALAEASV--TLQQDEETWKEAEQLVLDAYLSSRTVPPWKE 835 Query: 914 EIFWETQCQEMQQLADRVIACRQPGQSMEIDL--------ACNGVQITGWLPQVQPDGLL 965 + E + M ++ +EI + + ++I G L +V D Sbjct: 836 KADEEEFVEVMNATVSKMTNLAGDLVGVEIPMDVTVGQLDDGSPIRIKGRLDRVHRDSEG 895 Query: 966 RWRPSLLSVAQGMQLW 981 R + L + + Sbjct: 896 RMKVYDLKTGRSAPTY 911 >UniRef50_C7M0Y4 UvrD/REP helicase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0Y4_ACIFD Length = 593 Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 78/246 (31%), Gaps = 38/246 (15%) Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 + V E++ + A ++G ++ L R + + + M + D Sbjct: 329 EPVTAALEAAEIPAVVLGRTRTVSAMLARLRSLRDRRATVGHLIDELSSM----QVDDPS 384 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 + + + + + L+ ++ L QRL + V I T Sbjct: 385 HQHELDQVRDIAIEL------HRVDPLADLATFQEILEQRLAR-------RLDAVTIATF 431 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + + + V +LG+ + P P+ ++R+++R L A+ A Sbjct: 432 HKAKGLEWYHVHVLGVGERALPH-------------PRARTSAQREEERRLLYVAMTRAT 478 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 L +S+ G PS + ++ P A + ++ L Sbjct: 479 DSLSVSWHGGG--------PSPFLAPIVGDRAPLRPTPSAAARGAVARQRALRHALVAQR 530 Query: 785 TRMPFD 790 R+ Sbjct: 531 ARLARS 536 >UniRef50_C7GAA3 ATP-dependent nuclease subunit A n=2 Tax=Roseburia RepID=C7GAA3_9FIRM Length = 1237 Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 56/414 (13%), Positives = 125/414 (30%), Gaps = 83/414 (20%) Query: 385 EVEVLHDRLLAMLEEDP----------TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 E ++ R+ ++ + D+++++ + Y+ F + D Sbjct: 539 EARMIAKRIKELMGTQKVTDKATGELRPVQYSDMVILLRSLSGYAD----RFAAVLNDAG 594 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P S ++ +S+L + D+ + A+L P+ +++E L LR Sbjct: 595 IPAHTVSATGYFSTVEVQTVLSMLRILDNPRQDIPLTAVLRSPIA----GLSDEELAKLR 650 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + + +R+ +E + Q Sbjct: 651 --LKDKNVRF----------------------------YECVLEECERLKQEAEENPGQG 680 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLI 612 +E L + R+ L + P+ E + + + + + Sbjct: 681 RDDSE--EKLYRFYVTYEKLRQ-LVPDTPIHELIELLLKETGYGDYAAAMPAGDRRHANL 737 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ---RLDQERISQRFLAGPVNICTLMPMRS 669 + IA Y DEL + + + V I ++ + Sbjct: 738 LMLVEKAIAY-ENTSYKGLFHFVRYIDELQKYDVDFGEADL-IGENENVVRIMSIHKSKG 795 Query: 670 IPFKVVCLLGMNDGVYPRQLAPL----------GFDLMSQKPK-------------RGDR 706 + F VV GM + RQ G D M K + + D Sbjct: 796 LEFPVVFAAGMG-KNFNRQDTRSRLVLHPELGIGLDYMDGKQRVKSVTIAKRAIAKQIDM 854 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 ++ + AL A++KL ++ + ++ + +EL+ Y+G+ Sbjct: 855 ENLGEELRVLYVALTRAKEKLILTGSLKKAEETLSYIKAFP-EELLSYLGRESA 907 >UniRef50_A0AL18 ATP-dependent helicase/nuclease subunit A n=3 Tax=Listeria RepID=ADDA_LISW6 Length = 1235 Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 49/382 (12%), Positives = 116/382 (30%), Gaps = 89/382 (23%) Query: 385 EVEVLHDRLLAM-----------LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 E + ++ M L+++ ++ RDI+++ + S +P ++ A + Sbjct: 555 EARAIATKIREMIDNKFPIYDKKLQQNRSIQYRDIVILSRAMTS-APDME----EAMKVQ 609 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P+ S+ + I+LL + D+ + + A+L P++ + EE L + Sbjct: 610 DIPFYASNNSGYFETTEVATMIALLKVIDNPYQDIPLAAVLRSPIV----GLNEEELGQI 665 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R + + ++L Y + Sbjct: 666 R-----------------------------------------MAKKKGYFFDALLAYKDI 684 Query: 554 SGLIAELVGHLASLLMQLNIWRR-GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 ++ ++ + QLN WR + + W F + + Sbjct: 685 --TVSAAADRISDFITQLNNWRELSIRENLTALIWQIYQETNFYEFVGGLPGGKQRQANL 742 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS--QRFLAGPVNICTLMPMRSI 670 + + + L R D + V + T+ + + Sbjct: 743 R-ALYDRANQYEKTAFRGLFRFVRFVERLEVRGDDLGTAKTLGEKEDVVRMMTIHASKGL 801 Query: 671 PFKVVCLLGMN-----DGVYPRQLAPLGFDLMSQKP-----------------KRGDRSR 708 F VV + G++ +Y + L + S ++ R Sbjct: 802 EFPVVIISGLSKKFNMRDIYSKTLLDKDYGFASNYRDIEKMIVYPTIMQQAIKQKKSREM 861 Query: 709 RDDDRYLFLEALISAQQKLYIS 730 ++ + AL A++KL ++ Sbjct: 862 IAEEMRVLYVALTRAEEKLILT 883 >UniRef50_A7ZRD5 Helicase, UvrD family n=1 Tax=Escherichia coli E24377A RepID=A7ZRD5_ECO24 Length = 630 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 28/214 (13%), Positives = 72/214 (33%), Gaps = 21/214 (9%) Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + + S + + L + + LN + ++E+ + ++ Sbjct: 434 DVLREMAVQISSSDDDYSIVFEKLLTTIDSLN--IENPKIPKLIKEFNALLTSLVENHNG 491 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 + + L ++ + L L ++++ + + Sbjct: 492 ISDDKIEDVKLSIEELKEFSGMWTRF---KRKGLGDSLVAFRNALALGQLAESSMDEGLT 548 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + T+ M+ + +V L+GM +GV+P + +++R A+ Sbjct: 549 LSTVHTMKGLEKDIVFLIGMCEGVFP-------------DYRARTPKELEEERNNAFVAV 595 Query: 721 ISAQQKLYISYIGRSI---QDNSERFPSVLVQEL 751 A++ LY+SY + + D + S V E+ Sbjct: 596 TRAKRWLYVSYPRQRMMPWGDLRFQQKSRFVSEI 629 >UniRef50_A6W771 UvrD/REP helicase n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W771_KINRD Length = 1128 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 59/399 (14%), Positives = 102/399 (25%), Gaps = 82/399 (20%) Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V+ + V A D LP + + P + ++ L + + Sbjct: 451 AVLCRKRSQF-----TVLQRALRDAGLPVEVVGLGGLLTTPEVADVVATLHVLHDPARGD 505 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 + LL AR+ + L L W R LP L Sbjct: 506 HLARLL----TGARWRLGARDLAALGAWARHL---------QHRRAGLPPDPHEPGEEPL 552 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSG----------LIAELVGHLASLLMQLNIWRRG- 577 + V D+ G L L+ L L R Sbjct: 553 -------VLPDEVEAVSLVEALDDLPGAGWSGPDGRSLSPRAHARLSRLAAVLRRLRNRT 605 Query: 578 -LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 L + E +L+ + A A A A L Sbjct: 606 HLPVPDLVGEVERAL--LLDVEVAARPGSSPASARANLDALADAAASFSAGSQRP-GLGG 662 Query: 637 LRDELAQR----LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L E+ + V + T+ + + + VV + G+ + +P Sbjct: 663 FLAWLDAAEVRERGLEQGASEVSTDAVQLLTVHASKGLEWDVVAVPGLVERTFPASGETD 722 Query: 693 GFDL-------MSQKPKRGDRS------------------------------RRDDDRYL 715 L + P RGDR + ++R L Sbjct: 723 PGWLGGSGALGVLPYPLRGDREGLPRFDVEGAGTQKELDTARQRFLEACGQHQLAEERRL 782 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 A A+++L +S R PS ++E+++ Sbjct: 783 AYVAFTRAKEELLLSGAHWDDAA-KPREPSRFLREVLEA 820 >UniRef50_Q67RU7 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67RU7_SYMTH Length = 672 Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 56/194 (28%), Gaps = 31/194 (15%) Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLIEQQWQA 618 + + L L + + V D L + + + + Q Sbjct: 494 LRPVEELEDHL-RALGRMTAPEAIAYVRSVIGYDDYLQEYAARAGGRPDELLGLLAEVQR 552 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 L Y V + + V + T + + F V + Sbjct: 553 TAPRLLLPAYLGHV----------AAFSAQADRKAPEGQAVTLVTCHRAKGLEFPRVVVA 602 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 G D + P + P +++R L A+ A+++L+IS + Sbjct: 603 GAVDRLLPHRSNPD----------------IEEERRLMYVAVTRAREELWIS--APRSYE 644 Query: 739 NSERFPSVLVQELI 752 E PS V EL+ Sbjct: 645 GRECRPSPFVAELL 658 >UniRef50_C0BLR1 Putative uncharacterized protein n=1 Tax=Flavobacteria bacterium MS024-3C RepID=C0BLR1_9BACT Length = 910 Score = 75.1 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 54/442 (12%), Positives = 128/442 (28%), Gaps = 72/442 (16%) Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE--AAMTLIEQQWQAIIAEGLGAQYGDA 631 ++ +LN F + + + + + + + + A+ + D Sbjct: 416 FKDKANVPATFVSRFQELLRVLNDFSEKNKQPQISSEVNYFSEIFDGLSAQLTTFPFIDN 475 Query: 632 VPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 + L+ + L ++R+S A + + ++ R++ F+ V + +N+G+ P + Sbjct: 476 LSG--LKKIYLETLSKKRLSFSGDALEGLQLMGMLESRNLDFETVIISHVNEGILPGGKS 533 Query: 691 PLGFDLMSQKPKRGDRSRRDDD---RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 + +S K G S ++ D Y F L A+ + + + E PS Sbjct: 534 TNSYIPLSLKKIFGLPSFKEKDAVYAYHFYRLLQRAKNVYLLYNTATDVLEGGE--PSRF 591 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 V +L + A+ ++ + Sbjct: 592 VHQLKTQGIAKVQVNDQLAMPILDAVTPPLIEI--------------------------- 624 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 K + L L + +P+ + + L++ E+ Sbjct: 625 -------KKDQSVIDQLLQKAKSGFSPSALNTYIRNPIDFYKRYVLKLKDPEILEELIAY 677 Query: 868 EPF------ILEGLSRYQINQQLLNALVE--QDDAERLFRRFRAAGDLPYGAFG---EIF 916 F L+ L I Q L + + F P + I Sbjct: 678 NTFGTIVHDSLQALYTPAIGQVLTENHFKEFNQQLPHILTHFFEKHHSPTKSLKGKNLIA 737 Query: 917 WETQCQEMQQLADRVIACRQPGQ------------SMEIDLACNGVQITGWLPQVQPDG- 963 + Q ++ + C + +++I V G L +V Sbjct: 738 FSVLLQYLKDFLEYDQECAKKEPIYIESLEKEYQMTLQIPGVSESVLFIGSLDRVDKRNG 797 Query: 964 ---LLRWRPSLLSVAQG-MQLW 981 ++ ++ + ++ W Sbjct: 798 VTHIIDFKTGAVKPTDLKLKDW 819 >UniRef50_A4ALD4 ATP-dependent DNA helicase n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4ALD4_9ACTN Length = 1033 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 83/665 (12%), Positives = 192/665 (28%), Gaps = 89/665 (13%) Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + SSI +P EV + L ++ + V+V Sbjct: 334 LIEQRKSMSVATEPSSIHSFQLSTPAEEVAFIARHLREK-HVLESVPWSRMAVIVR---- 388 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 +P S R ++ V+ + S S F ++ LL++ Sbjct: 389 -------------TGSLIP---SLARQLRTLEVVTSVSSARSAVRDEFSVNGLIVLLELA 432 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG-YA 536 + T + + + G G D ++R L + L LG Sbjct: 433 LERR----TLDAASAVELLSSSVG---GFDAVSLRRL----------KAALRHEALGAEI 475 Query: 537 MESAQGEWQSVLPY-DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC---R 592 +SA L + + + A++ L+ A +EE L Sbjct: 476 YDSADQLIAQALAAPAGFTSIETRVSRQAAAVAKNLHETAAAGAAGDTIEELLWGAWQRS 535 Query: 593 DMLNAFFLPDAET---EAAMTLIEQQWQAIIAEGLGAQYGDA-VPLSLLR-DELAQRLDQ 647 + + +F + A+ + P ++ + L+ + + Sbjct: 536 GLADRWFTQALGSGVVAEEANRHLDAVVALFSSAKRFVERRPDAPANVFLTEWLSADVAE 595 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK----- 702 + ++ R + V + T + F VV + G+ + V+P P+ Sbjct: 596 DTLAARSIVDSVTVGTPASVIGQEFDVVVVAGVQENVWPNLRVRGSLLGAHDLPRVLAGE 655 Query: 703 ---RGDRSRR--DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI---DY 754 DR R D+ +F +A+ A +++ ++ + + PS + + + Sbjct: 656 KLAVADRRREVLHDELRMFAQAISRATREVLVT-----AVEGDDNMPSPFLTLIPSPDEP 710 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG 814 + L + E A+ + + + PG S W Sbjct: 711 VRARPPLSLRGLVGVLRRELTTSANPGAAASSLARLAREGVPGADPS---SWY-GLRSPS 766 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 P V ++ F + P+ + +L + S + + Sbjct: 767 TTAPLVDLSEPDAK-VRVSPSRMESFESCPL-HWAIDQLGGSTSNTASNLGTLIH-GVAE 823 Query: 875 LSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC 934 + + L A+ ++ +++ + ++ + Q + A Sbjct: 824 TATDFNAEALFKAVEDRWSEMSFEASWQSEAE-------KLRAKKLTQHLATYLRDFTAN 876 Query: 935 RQPGQSME--IDLACNGVQITGWLPQVQPDG-----LLRWRPSLLSVA--QGMQLWLEHL 985 S E L ++G + +V+ G ++ + + + + + Sbjct: 877 GGELISNEMGFTLPLEQALLSGKIDRVEMYGGTTAVIVDLKTGKNEPSTDKAVADHPQLA 936 Query: 986 VYCAS 990 Y + Sbjct: 937 AYQLA 941 >UniRef50_Q1IKH8 DNA helicase/exodeoxyribonuclease V, subunit B n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IKH8_ACIBL Length = 906 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 106/634 (16%), Positives = 187/634 (29%), Gaps = 149/634 (23%) Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS--APADRYL 435 C P E+ LEE+P+ + V+V ++ +F P +R L Sbjct: 221 ACADPSDEIRTSALWARKKLEENPSAR---VGVIVPRLEGLRETFATIFEDVLHPENRLL 277 Query: 436 -------PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + IS R HP++ A + +L L S +E+ ALL +A + Sbjct: 278 TRTATARAFEISLGRPLSEHPMVRAALRILRLATSSLNAEEFSALLRSRYIAGGTN---- 333 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 E+ R +D + R+L T L ++L G A E G + Sbjct: 334 ----------EASARALVDFELRRKLRATVT--------LAQVLSGKAEEKVVGAPKMAK 375 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 A+ G L EW + +L P E E + Sbjct: 376 MLRAFFAKPAKT-GKLTH------------------TEWAAEAQRILRIMGWPGDEGEFS 416 Query: 609 MT----LIEQQWQAIIAEGLGAQYGDAV-PLSLLRDELAQRLDQERISQRFLAGPVNICT 663 + + ++W+ ++ + + S + EL + + + A PV I Sbjct: 417 LNSEEFQVSKKWEELLKDFCALDQALPLKTASEMLRELERAAAEATFAAENEAAPVQIVG 476 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR------RDDDRYLFL 717 + F + G++D +P++ P F + + G + RD +R Sbjct: 477 PLAASGETFDALWFCGLSDETWPQKGHPNPFIPFALQKSAGAPNTSAEWNLRDGERRTA- 535 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 L SA + +S+ R+ D+ E PS L+ D A V+ Sbjct: 536 RLLQSANE-CVLSWPQRN--DDGELRPSPLLA--------------GVPPATDLEIADVR 578 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETL 837 S + L KA + + L + Sbjct: 579 D--------------------WNSLQKGALLERYDDEKAPAIANEELKRRGTTVL---QW 615 Query: 838 QRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL 897 Q P RAF Q RL E P + R I L + E L Sbjct: 616 QS--GCPFRAFAQTRLAAEKLEES-------PLGANAIERGNIVDTALRFV-----WEEL 661 Query: 898 FRRFRAAGDLP--------YGAFGEIFWET---------------QCQEMQQLADRVIAC 934 G +P GA E + + + +L + Sbjct: 662 RESSNLNGGIPTMTLEFVIAGAIERALLEEFPSGEESWLVRHREIERERLSKLVHDWLDV 721 Query: 935 RQPGQSME-------IDLACNGVQITGWLPQVQP 961 + + + +++ G + ++ Sbjct: 722 ERKRHPFHSVRSQVNVTVKLGELELKGRIDRLDQ 755 >UniRef50_B8DL19 Putative uncharacterized protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DL19_DESVM Length = 1100 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 77/517 (14%), Positives = 147/517 (28%), Gaps = 72/517 (13%) Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 IR + E P + R Y A + G A L+ Sbjct: 498 IRHPYLKMLELDGERPLRDLFHLMENVVRGGASYVDPRALAREVAQKAPGGEHGPAAALL 557 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA----FFLPDAETEAAMTLIEQQWQ 617 + L L W + + + D+L A + + + Q+ Sbjct: 558 HRVLELC--LTRW-EAADTPARVADVVGALCDLLLAHGGTLWERFPIDAECLFRLMQRVI 614 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS-QRFLAGPVNICTLMPMRSIPFKVVC 676 + + A P +L L + L +ER+ + + + ++ R + F+ V Sbjct: 615 PALRDCELA--DTPFPREVLHTILRETLREERVPFEATPLAGLQVLGMLETRLLRFRRVI 672 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR---YLFLEALISAQQKL--YISY 731 +L + P S + G R +R + F L A+Q + Y + Sbjct: 673 VLDATEDRLPGAPGHDPLLPDSLRAMAGLPDSRRRERVAAHNFHRLLAGAEQAVLCYQTG 732 Query: 732 IGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 + RS + ++ S V+EL+ + + A + Sbjct: 733 VDRSGLLDEKKIRSRFVEELL------WREERARGGLLSPGQPPLHAAACTVRP------ 780 Query: 792 QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQM 851 +A + + + L L V TL + PVR F + Sbjct: 781 ---------------FRSAPRPIERTTAINDALERLLDAPVSPSTLDAWLTCPVRFFHER 825 Query: 852 RLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL---------FRRFR 902 + E +E D P + L + L + + L +R Sbjct: 826 LAGLAPPDEVNEGDD--PIAVGDLLHKVLLDFHLPHKGREVRRDELSAEHLTRLFLQRLG 883 Query: 903 AAG---DLPYGAFGEIFW---ETQCQEMQQLADRVIACRQPGQSMEIDLACNG------V 950 A+G LP A + E + + + +R + +E + G Sbjct: 884 ASGLSAQLPPDALLMLEVAGPERLGRYLSRQPERFTVLELE-EPVEATIDVPGSAGRRIR 942 Query: 951 QITGWLPQV------QPDGLLRWRPSLLSVAQGMQLW 981 ++ G + +V G + V W Sbjct: 943 RLHGRVDRVDLRDFEDGQGAVILDYKTGKVEWKPSAW 979 >UniRef50_C4GBK5 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GBK5_9FIRM Length = 640 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 61/401 (15%), Positives = 120/401 (29%), Gaps = 71/401 (17%) Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + + + RP I +P+ E E ++ +L + + V+ Sbjct: 301 KMRYAKSIRPDRKEMGRIVVRRLRNPREEAE----QIGGLLRKRRG----ETAVLFRTRA 352 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDR-RARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 + I+ +P+ + + R H + + IS SL ED+L +L+ Sbjct: 353 QSTELIR-----VLRQEGIPFYMRRKERKVAGHWLTQDIISYCSLALGHRRREDLLRILN 407 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG- 534 P EE + G + A + + LLG Sbjct: 408 RPCRQLPRSCIEEETFEWGELGRRLKEHPGQAKQFLELERDMAFLASSSPYAALTYLLGK 467 Query: 535 --YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 Y + +DE L+G L L + + L+ ++ + Sbjct: 468 VGYRAFLEESYRGKRSEWDEIEM----LLGILMGLARGIRG-----RGKEALKSYIKILE 518 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 LP+A + + L Q Sbjct: 519 ---EERLLPEAGGADQYDQRRRGMGE-----------------------NEILAQSNNRA 552 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 V + T + + F V ++ +N+G+ P A R +++ Sbjct: 553 PP----VGLFTFHGSKGLEFDQVHIMDVNEGITPSSRARG-------------REALEEE 595 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 R +F AL A++++Y+ Y N + PS + E+ + Sbjct: 596 RRMFYVALTRAKREVYL-YSCL-EMGNQKLAPSRFLAEIQE 634 >UniRef50_C8RQU9 ATP-dependent DNA helicase II n=2 Tax=Corynebacterium jeikeium RepID=C8RQU9_CORJE Length = 1136 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 85/639 (13%), Positives = 174/639 (27%), Gaps = 88/639 (13%) Query: 372 SSITFHVCHSPQRE----VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 ++ + + E V+V+ + + DI V+V S I V Sbjct: 390 ETVQVTITPTETAERLKIVDVVRRA-----HIEQQVAWDDIAVIVRGTGS----IARV-R 439 Query: 428 SAPADRYLPYAISDRRAR-QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 +P + P+ + ++ ++L+ + Sbjct: 440 RTLMAYGVPVKVDPTSVVLAEQPLARMLLLAAEASYRTLTVAEMHSVLE----GSVGGAD 495 Query: 487 EEGLRYLRQWVNESGIRW----GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 +R + + V IR G L A + Sbjct: 496 PVMVRRVHRAV-ALAIRSAQMAGQVAGQAAGQTLRAHEDGRPFQAADYVTELLNHPGDP- 553 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL--EEWLPVCRDM-LNAFF 599 + E++ ++++L + + + W DM L A Sbjct: 554 --ANQWITSHCGPREKEVIQRVSTVLEAGRQAWKNNQGTEMVLWKIWQATKLDMHLRAQA 611 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLG-AQYGDAVPLSLLRDELAQR--LDQERISQRFLA 656 L A ++ A+ + + L + R + A Sbjct: 612 LKGGSLGAQADADLDAVMSLFDILGDFAERNPHAQMESFVENLRAQKVPTGGRDQRGVRA 671 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF-------DLMSQKPKRGDRSRR 709 G V I +KVV + G+ +G +P G DL+ + R Sbjct: 672 GAVEILPAHAAAGRQWKVVAIAGVQEGEWPTGPTVGGLFGQLELVDLLDRGIDPSVPVAR 731 Query: 710 -----DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL------------- 751 +++R LFL AL A ++++ + S + PS + E+ Sbjct: 732 INDAIEEERRLFLLALSRATDSVHVTCVRNSGDE--ALVPSRFIAEMGVEPTELATADEA 789 Query: 752 ------IDYIGQSHYLPGDEALNCDESEARVKAHL--TCLHTRMPFDPQNYQPGERQSYA 803 +G+ G AL + + A L P + A Sbjct: 790 EGAEEAETSVGRKVSGSGAGALPRVLAIDSLLAELRDAVTDPNRPGHERRAAARNLAKMA 849 Query: 804 REWLPAASQ---AGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTE 860 R + A+ G A + + L+ + +RAF V+ TE Sbjct: 850 RAGVYGAAPEDWWGTAEPSTDARVLAGDKIRLSPSKLESWNTCALRAFLDSNGGVSESTE 909 Query: 861 DSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQ 920 + + +V+ + + + LP+ G + TQ Sbjct: 910 -------------AMRVGIFIHAIAEQIVQGMELDE--AQLAVREILPHVLDGPAWKNTQ 954 Query: 921 -CQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQ 958 + + +++ + E +L + + Q Sbjct: 955 TVERWEGGVNKLHGFIAGYRDKEFELETER-TLRARVGQ 992 >UniRef50_Q5WF16 UvrD/REP family ATP-dependent DNA helicase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WF16_BACSK Length = 763 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 48/369 (13%), Positives = 106/369 (28%), Gaps = 70/369 (18%) Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 + + E ++ + + ++ + P +I V+ S + D LP+++ Sbjct: 461 NEEEEATMIVEEIKRLI--GKGICPSEIAVLYRTSTSVRALV-----DRLVDTTLPFSLE 513 Query: 441 DRRA-RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 A P + +S L + + + V +L A F I +E L L Sbjct: 514 QGFACFYERPFVRRALSFLRIGRNEESP-----YVMVELLKALF-IKQEHLDQL------ 561 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 L +++ E A+ Sbjct: 562 ---------------------------------LHIQKTERCSLLEAIPFLTELPAFQAK 588 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 + L + ++ ++ E + + + E Q Sbjct: 589 KLKTLPADCRRMQKM--NPSEALAFAEARLGLNETIKKQGQEGNKFEKGSDDFNQL---- 642 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 + Q+ + D + + + + Q + + T+ + + F V ++G Sbjct: 643 --KVAATQFETVESFLIHIDHVIAKQQECQTFQTRHPKSIQLLTIHRSKGLEFSHVFIVG 700 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 +G P D + GD ++R L A+ A+++L IS Sbjct: 701 AVEGSLPH-------DYALDAWREGDDGPLQEERRLMYVAMTRAKKELAISAPV--HYRG 751 Query: 740 SERFPSVLV 748 P+ V Sbjct: 752 KRAHPTRFV 760 >UniRef50_B0S8V9 ATP-dependent DNA helicase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S8V9_LEPBA Length = 664 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 53/436 (12%), Positives = 131/436 (30%), Gaps = 82/436 (18%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 IL L N + + + P + + + S + E E +++L + + Sbjct: 290 ILNLANAVLEKSSENYKKNLVSAFPKNSKNPYL--VQLPSLEEEAEWTSNQILELY--EE 345 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 +T ++ V+ +S + V + +PY R ++ I+ L + Sbjct: 346 GITLSEMAVLFR--AGFSSHLLEV---QLNSKKIPYRKYGGRRFFDLAHVKDMIAYLKII 400 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 ++ +D+L+ + +L + L L + + + +W D+ L LP T + Sbjct: 401 ENP---KDILSWNRILLLEDQIGKKYSIL--LFKKLESNQFQWKDDEHFF--LGLPETTK 453 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 ++ L L ++ Sbjct: 454 DSFL-------------------------------------KLMHCLDSVSPVI------ 470 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 ++ L + + + + + L + + Sbjct: 471 HSTQQILERILAYYFPLLESNYDDAEKRKQDLDALVLLSKQ-------EPKLSDYLSNLI 523 Query: 642 AQRLDQERISQRFLAGP--VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 ++ + I + + T+ + + +K V L + +G P +L Sbjct: 524 LNPVEGKEIGTSNEVEDEFLTLSTIHSAKGLEWKYVFTLQVVEGNLPHSRIRTTDEL--- 580 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 +++R LF A+ A++ L+++ + + N S + +L Sbjct: 581 ----------EEERRLFYVAITRAKEALFLTNPAFNDK-NRFTPVSRFLSDLPKENQLLQ 629 Query: 760 YLPGDEALNCDESEAR 775 +L A + E Sbjct: 630 FLDPKNAQSPKEIPKD 645 >UniRef50_A5WC18 UvrD/REP helicase n=2 Tax=Psychrobacter RepID=A5WC18_PSYWF Length = 742 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 56/190 (29%), Gaps = 26/190 (13%) Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 + +L Q+ + + L D + + + + E Sbjct: 546 INELYHVLIKAQQQATVADILQTLIDFYAPILKTLEDNWRERSEDFRVLINLAQEHS--- 602 Query: 628 YGDAVPLSLLRDEL-----AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 L + L + + V I T+ + + + VV + + D Sbjct: 603 -----SLDNFLENLALDPPNDSVAVMTNPEDKQTDAVTISTIHSAKGLEWPVVFVNALVD 657 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR-SIQDNSE 741 G+ P + F+ + +++R LF A A+ LY++ S Sbjct: 658 GLMPHHRSLHEFEAL------------EEERKLFYVACSRAKTHLYLTAPDYFSSFAGYF 705 Query: 742 RFPSVLVQEL 751 S + E+ Sbjct: 706 DKISRFISEV 715 >UniRef50_D2EH37 Recombination helicase AddA n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EH37_PEDAC Length = 1238 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 49/382 (12%), Positives = 116/382 (30%), Gaps = 82/382 (21%) Query: 385 EVEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 +++++ R+ + + L DI ++ + ++ + F Sbjct: 545 QLQMIAQRIKRLFADQTEVFDRDTQEMRPLKYSDIALLHSTGNNNLNIVDT-FKKYG--- 600 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P +S+ + + ++LL + D+ + + A+L P++ Sbjct: 601 -IPIEVSNAQDYFQTTEVSIMMALLKIIDNPYQDIPLAAVLRSPIV-------------- 645 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 G+D++ + L + H + L +Q+ D Sbjct: 646 -----------GLDENELAFLRISKKNGHYFESVL--------------YFQNEFKIDYQ 680 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEE--WLPVCRDMLNAFFLPDAETEAAMTL 611 + A L + L QL +R+ L+Q+ L + W + + Sbjct: 681 NEFQANLKRKIDQFLAQLQHFRK-LSQQCTLVDLLWEIYQETGYLDYVGGMPDGPQRQNN 739 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + + + + G + + + D V + T+ + + Sbjct: 740 LHALYDRAQSYEESSFKGLFQFVRFVEKMREKNKDLAENPVVTDTEAVKLMTIHSSKGLE 799 Query: 672 FKVVCLLGMNDGVYPRQLAPLGF---------------------DLMSQKPKRGDRSR-- 708 F +V L+ + G + + D M + R R Sbjct: 800 FPIVFLIDADHG-FNNSDTKGRYVLDRDAGMGITVKDFVHRLEVDTMQKNWIIDVRQRKM 858 Query: 709 RDDDRYLFLEALISAQQKLYIS 730 ++ + AL AQQKL ++ Sbjct: 859 LAEELRVLYVALTRAQQKLIVT 880 >UniRef50_C4DDU0 DNA/RNA helicase, superfamily I n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDU0_9ACTO Length = 1041 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 83/601 (13%), Positives = 154/601 (25%), Gaps = 111/601 (18%) Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 A + LP + P + S L++ + LL Sbjct: 429 EKALRAKGLPVEVIGLGGLLDAPEVRELHSTLTVLARPTAGPAFMRLL------------ 476 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 +G RW I ++ L A R G G + ++ Sbjct: 477 -------------TGPRWRIGPRDIAALHARARELAPERRGFEPSAEGL---NEASLAEA 520 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 + + +L +L R L Q + ++L Sbjct: 521 LEDLGDLRRYSDAAAERYTALREELGYLRSRLDQPVS-----DLIAEILK--VSGLDIEV 573 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVP-LSLLRDELAQRLDQERI----SQRFLAGPVNI 661 A ++ A I E + ++P L L ++ER G V I Sbjct: 574 AVHRGDSERLDAFIDEAVRYTSTASLPSLDGFLSYLDAAEERERGLELTGTTEHTGAVQI 633 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQ--------------------LAPLGFDLMSQKP 701 T+ + + + V + G+ GV P + A L + + Sbjct: 634 LTVHAAKGLEWDCVAVPGLAKGVLPGKVMGGSWLTDTGKLPYPLRGDAAELPYFRLGGVT 693 Query: 702 KRGDRSRRD-------------DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 K + SR + ++R L AL A+ L+ + S R PS + Sbjct: 694 KAAELSRAEAEFKKDVQFHHEVEERRLAYVALTRARTHLFACGYWWDDGE-SAREPSPYL 752 Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP 808 E + G+ D + A + L Sbjct: 753 DETVAAGGRVDEWIEDPGEENPLLATELSADWPEPEPLGSNQITVAAAAGAVRASDGALD 812 Query: 809 AASQAGK-----------AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNF 857 ++QA + + +P + + L + A Sbjct: 813 DSAQAKRWAEEAELLLAERAESASDGMEVPVPSQLSVSQLVAWHADAQEF------AARL 866 Query: 858 RTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFW 917 R E P R + + DLP A GE Sbjct: 867 RRPVPEPPAP------HTRRGTAFHAWVEKRFDGG-------TLFDMDDLPGAADGEPDT 913 Query: 918 ETQCQEMQQLADRVIACRQPGQSMEIDL--ACNGVQITGWLPQVQ-----PDGLLRWRPS 970 + + +Q+ + + ++E+ GV + G + V ++ W+ Sbjct: 914 DAELAALQEAFNASEWASRTPIAVEVPFVTVLEGVVVRGRMDAVFATDDGGYEIVDWKTG 973 Query: 971 L 971 Sbjct: 974 R 974 >UniRef50_Q1LLG5 DNA helicase/exodeoxyribonuclease V, subunit B n=9 Tax=cellular organisms RepID=Q1LLG5_RALME Length = 976 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 62/540 (11%), Positives = 135/540 (25%), Gaps = 94/540 (17%) Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 A + + S +L LL P F+ + + + + + + G Sbjct: 374 AAALMRWFDVLARDGDSAALLDLLKSPFCLPAFEHRGAAIALMERRIRRAVVTGGW---- 429 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQG---EWQSVLPYDESSGLIAELVGHLASL 567 R+ +A + ++ I L + Sbjct: 430 ------------------ARLAHLFAERERAAGALVDAETMEASDAELQIRAAARTLIAT 471 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAF-FLPDAETEAAMTLIEQQWQAIIAEGLGA 626 L ++PL WL ML+ + A + + Sbjct: 472 LADEAAQWPRGLAQQPLHVWLGRLDAMLDTLDMRVALAADDAGRQLLDALAKLGDLPDDE 531 Query: 627 QYG-DAVPLSLLRDELAQRLDQERISQRFLAGP--VNICTLMPMRSIPFKVVCLLGMNDG 683 + R L+ L+ + + I L R F V ++G +D Sbjct: 532 TGSHATLNQQEFRAMLSALLESVAYKEPSAQSQSRITILPLNGARMRRFDGVVVVGCDDA 591 Query: 684 VYPRQLAPLGF--DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 P A L F + M ++ DR R + L ++ + +++ + Sbjct: 592 QLPSSAAELMFFSNQMRRELGLEDREARFAQQARDLAEVLLNNSDVVLTWQRIGSR-GEP 650 Query: 742 RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQS 801 S ++ L ++ A Sbjct: 651 HHVSGWIERLSACCARAGTPIEASATP--------------------------------- 677 Query: 802 YAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 + P +PE + P + F L ++ D Sbjct: 678 ------ALHDTFAQPAGMPAPVAPERVPERWSAQAYNTLRRCPYQFFASRMLGLS--GLD 729 Query: 862 SEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET-- 919 + D E + L + Q + + RR ++ +FG+ E Sbjct: 730 TLSDDLEKRDIGNLLHRVLLQY--HEEIHASGERDSDRRLARLREISDTSFGKQIAEDGN 787 Query: 920 ---QCQEMQQLADRVIACRQPGQSM-------EIDLACN-------GVQITGWLPQVQPD 962 + ++ +A + + E D + +++ G + ++ Sbjct: 788 AISYYRRWMEVLPSYVAWQAEREEAGWHWRGGEFDAGVDVAMPDGVPLRLAGRIDRLDKG 847 >UniRef50_C7HA04 ATP-dependent exoDNAse beta subunit n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA04_9FIRM Length = 1233 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 58/374 (15%), Positives = 111/374 (29%), Gaps = 73/374 (19%) Query: 389 LHDRLLAMLEEDPTLT---------PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 + R+ +++ + D +++A + +++A R +P Sbjct: 567 IARRIEELVQSGEPVRDGSATRPVQYEDCCILLAARIDFPAYVEA-----LTARGIPVYA 621 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 R P + I+LL + D+ ++D+ L +L F T++ L LR E Sbjct: 622 DARENLLDAPHIRPLIALLKVIDNP--AQDI--YLAAAMLGPLFGFTDDDLVRLRARAEE 677 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 + G + L L +SG Sbjct: 678 IQKQQGENAPQRISLY------------------------------GALLLTVNSGEDTP 707 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 G + + +L R +A+ P E+ L A + + A Sbjct: 708 FTGKVRAFYARLTELR-RMARSVPAEQLLEEIFASTGYLAALGVMENGARRREDARRFAS 766 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 G G+ A+ ++ LA Q+ + G V + T+ + + F VV + Sbjct: 767 FCAGAGSGGISALVRAIDAAALAGSTGQDTVPGGSRPGCVTVMTIHRSKGLQFPVVFVAD 826 Query: 680 MNDGVYPRQLAPLGFDL-------MSQKPKRG----------------DRSRRDDDRYLF 716 + L + +P+ G R + L Sbjct: 827 -TARRFNAADTRQPVLLHRMYGAGLRLRPEEGEGAYKTAAYTALSNVHAAEMRSEQMRLL 885 Query: 717 LEALISAQQKLYIS 730 AL AQ KL ++ Sbjct: 886 YVALTRAQDKLILT 899 >UniRef50_Q0G5V0 Helicase, UvrD/Rep family protein n=2 Tax=Aurantimonadaceae RepID=Q0G5V0_9RHIZ Length = 1211 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 61/384 (15%), Positives = 110/384 (28%), Gaps = 81/384 (21%) Query: 383 QREVEVLHDRLLAMLEED-------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 R + + D++ L + L P D++++V ++ P + A A +R + Sbjct: 567 YRLAQRIADQIAEWLGDPIVEKGRIRPLDPGDVMILVRKRTNFIPAMAA----ALRERGI 622 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 A +DR H ++ I+L + + + ALL P+ F+ T++ L L Sbjct: 623 SVAGADRLTITEHIAVQDLIALGRVAANFEDDLSLAALLKSPL----FEFTDDELMAL-- 676 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 L GL R L G +W Sbjct: 677 -------------------ALSRGPLEHLSAGL-RKLGGEEGPGRVPDWFP------DGE 710 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI--- 612 A L+ + +L+ R P+ M + Sbjct: 711 PAARLLEKAHHAIERLDELRNRTG--------FESVFTFYARILGPEGGRSKLMARLGRD 762 Query: 613 -EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 A + L L +L + + G V I T + + Sbjct: 763 TADVIDAFLDLALSEDTAGVSGLDAFLSDLEAAPPEIKREMEGGRGEVRIMTTHASKGLE 822 Query: 672 FKVVCLLG--------------MNDGVYPR--QLAPLGFDLMSQKP---------KRGDR 706 VV L+ M PR GF + K + ++ Sbjct: 823 APVVFLVDPGSAPFHGSHGSRLMRWEEMPRLLADQAPGFLWRAAKEVENSAIAALREIEK 882 Query: 707 SRRDDD-RYLFLEALISAQQKLYI 729 R +++ R L + A ++L I Sbjct: 883 QRAEEEYRRLLYVGMTRAAERLVI 906 >UniRef50_C5RQN8 Recombination helicase AddA n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQN8_CLOCL Length = 1287 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 41/385 (10%), Positives = 107/385 (27%), Gaps = 88/385 (22%) Query: 385 EVEVLHDRLLAMLEEDPTLT--------------PRDIIVMVADIDSYSPFIQAVFGSAP 430 E +++ + ++ + +DI++++ + + VF Sbjct: 570 EAKIIGAEIKKIMGREAGYRRKKVFDKGSYRDVEYKDIVILLRSTVNRTD----VFLEEL 625 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 + +P + ++ ++LL + D+ +LA+L P+ +++ L Sbjct: 626 KNLEIPVYADSTSGFFDNIEVKTILALLQVIDNPKQDIPLLAVLRSPI----GGFSDDEL 681 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 ++ +M+ + L Sbjct: 682 IDIK----------------------------------------ISMDKEYCYFFDKLSN 701 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 G +L + L +LN +R +E + D F+ Sbjct: 702 YCVVGSDNDLREKTKAFLRRLNDYRSKSLHLSLVELIWFLFTDTGYLAFVGTLPNGMQRQ 761 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS--QRFLAGPVNICTLMPMR 668 + + Y +++ + V I T+ + Sbjct: 762 GNLRILFHRAKQYEATSYRGLFNFINFMEKMKNTSSDLGDAKLLGENDNVVRIMTIHKSK 821 Query: 669 SIPFKVVCL-----------------------LGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 + F VV L +G+ + ++++ L + ++ Sbjct: 822 GLEFPVVFLASTSKRFNNRELNNEFLFHHNFGIGIKYTDFEKRISYSSI-LRNLIQEKMK 880 Query: 706 RSRRDDDRYLFLEALISAQQKLYIS 730 ++ + AL A++KL I+ Sbjct: 881 IENYSEEMRVLYVALTRAKEKLIIT 905 >UniRef50_A8RMK4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RMK4_9CLOT Length = 1094 Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 55/169 (32%), Gaps = 33/169 (19%) Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 L FLP + + L+ W + + G V +S + L Q Sbjct: 925 LAERFLPRLKRDRPWKLLAD-WISCLGLGSDKSMDTFVCMSYFHKTMEDMLSTLAFGQAH 983 Query: 655 ----------LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 + V + TL + + F VV L G+ G+ P + + Sbjct: 984 DLKRSGQDSRPSDAVTLMTLHASKGLEFPVVFLYGLRQGILPLKTGKGAVN--------- 1034 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 +++R L + A+ +L ++ + PS ++EL Sbjct: 1035 ----PEEERRLMYVGMTRARDELILT---------TSEEPSPFLEELPK 1070 >UniRef50_C4DDU1 DNA/RNA helicase, superfamily I n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDU1_9ACTO Length = 1029 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 95/707 (13%), Positives = 194/707 (27%), Gaps = 95/707 (13%) Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLL--HNIQSDILELENRAVAGVNIEEF 358 A++G G D + LL + NL H S +L + + + Sbjct: 270 ATFGFRGAD-VRLLREFGDRFPTADGDPAPEVNLATCHRSASALLNATSLVAKKLRGTDR 328 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 R+ RP + S ++ + + L + + + V+V + Sbjct: 329 FRARAPRPEVGA-GQVEVAALRSAAQQAAYIARQ-LRVAHLREGVAWSQMAVIVKSAAEH 386 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 P ++ A + AI A + P++ ++++ Sbjct: 387 LPVVERALRHAGVPVEI-AAIDQ--ALSARPIVRHLLTIIQC------------------ 425 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR--MLLGYA 536 + + L + G D + R L LL A Sbjct: 426 -----GLNPKSLDEDTAVALLHSVYGGADSLSERRLRQELRRLAHAADVFRSPGELLVEA 480 Query: 537 MESAQGEWQ-SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 + P+ E IA L+ + S + + + L L Sbjct: 481 LRDPAELTALPEEPWAEPPRRIAGLMECVRSATGSVEDVLWAVWERADLSRRLARRAVSR 540 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL-DQERISQRF 654 ++ + AM + GA L Q L R +Q Sbjct: 541 DSRAVAADGDLDAMMTLFDWAADFADRLPGAGAD-----VFAAHVLEQVLPADTRAAQAR 595 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF--------DLMSQKPKRGDR 706 V + T + + + +V + G+ +G +P + S Sbjct: 596 RGETVQLLTAHSAKGLQWDLVVVAGVQEGTWPNLRPRGSIMGSEALVETVTSGTVVDTMT 655 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA 766 D++R LF A A+ +L ++ + D E PS ++EL + + L Sbjct: 656 LLLDEERRLFYVAATRARDRLIVTCVA----DEDENQPSRFIEELGITVERPARLERPMT 711 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPG----ERQSYAREWLPAASQAG-KAHSEFV 821 L L P + + A++ +P A Sbjct: 712 LPS----------LVAELRLAACGPAGRRKDAAIAQLSVLAKQAVPGADPEEWWGLRPIS 761 Query: 822 QPLPFTLPET---VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRY 878 P LP V T++ L+ P P + L Sbjct: 762 DHAPLILPGERVKVSPSTVELVEQC--------GLRWMLERHGGTEPSGLPQEIGNLVHA 813 Query: 879 QINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ-- 936 + Q A+ + + LP+ A + + + ++ + D+ + + Sbjct: 814 AAEAAAVTDDPRQAMADFVAQHLA---KLPFEAPWK--AKQDSERVRSMVDKFASWLESN 868 Query: 937 ------PGQSMEIDLACNG----VQITGWLPQVQPDGLLRWRPSLLS 973 + + L +++G + +++ D R + Sbjct: 869 NRDLVAAEKRFTVKLPDGPPGVTTELSGAVDRLERDLHGRLHVVDIK 915 >UniRef50_C2FTD7 Putative uncharacterized protein n=2 Tax=Sphingobacterium spiritivorum RepID=C2FTD7_9SPHI Length = 979 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 97/295 (32%), Gaps = 51/295 (17%) Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 SL +L LA+ + R + F+ +T + + I + Sbjct: 453 LSLTKELKSLLEYLAKRHLEQ---QNLRQLDAELFV---KTIQELNRMHDTLAQHI-QTS 505 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 G + +L+R L +S L+G + + L+ R++ F V +LG+NDG+ Sbjct: 506 GNNFAPRFAAALIRKALEAI--SVPLSGDPLSG-LQVMGLLETRNLNFDHVVILGLNDGI 562 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDD---RYLFLEALISAQQKLYISYIGRSIQDNS- 740 P+ F S + G + D Y+F + AQ+ +S++ S+ D S Sbjct: 563 IPQNSVGNSFIPDSLRRAYGLPVLENQDAISAYIFYRLVQRAQK---LSFVYNSLTDESN 619 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 PS +++L + + ++ + Sbjct: 620 TGEPSRFLKQL----------EFESNFEFRYQDQHLQIKV-------------------- 649 Query: 801 SYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQV 855 E L + T+ L + A+P+ F++ ++ Sbjct: 650 ----EDQQELVIPKTTVIMDKLGLYLSGNRTLSASALTTYIANPIDFFYKYVAEI 700 >UniRef50_A6RX56 Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A6RX56_BOTFB Length = 999 Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 52/464 (11%), Positives = 128/464 (27%), Gaps = 67/464 (14%) Query: 380 HSPQREVEVLHDRLLAMLE-EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 + Q+E + + + ++ L D +++ S + + S+ + Y Sbjct: 320 ATAQKEADWIIQEIQRIMGMTGDLLDLNDFAILIR-----SSALSRIIESSLGKAGIAYR 374 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV-----LAARFDITEEGLRYL 493 + ++ + L + + ++ + +++ P + + + E L Sbjct: 375 MVGGLRFYDRIEIKTLLDYLRVINLPDHNDALARIINTPSRRIGEVTIKALLEEAEQSKL 434 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 W G + + R L + + + Sbjct: 435 TLWSLILKSVQGRRATKTK-----------LTASVERNLSVFV----DIILTGMKKVADP 479 Query: 554 SGLIAELVGHLASLLM--QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 S +V + ++ W + +W ++++ D + + Sbjct: 480 SNTENSIVKIMEFIIEKTSYETWLEEHRGDITKAQW-DNVKELMTQ--ATDFQELISNGY 536 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 ++ I D++ L LA + +E V I T+ + + Sbjct: 537 EDESLPQI-DGLKQEDASDSLSRFLANVALASEVTKEEDKTN-NTPQVTISTIHAAKGLE 594 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 + +V + G G P A D++R L A+ A+ L +S Sbjct: 595 WPIVFIPGAYQGSIPHSRAED----------------TDEERRLLYVAMTRAKALLNMSC 638 Query: 732 IGRSIQDNSE-----------------RFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 ++ + PS L + + Q P + ES A Sbjct: 639 PLKNSLQELTTTCPFLSARGLRAHLDYKGPS-LRSNTVQCLAQILRRPFPSRESIAESSA 697 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHS 818 ++ + P + + + S + K Sbjct: 698 CLERIEDTYYPLEPENDKEDESKWIVSNGNPNFTMGQRPAKRRR 741 >UniRef50_Q8RCZ0 ATP-dependent helicase/nuclease subunit A n=3 Tax=Thermoanaerobacteraceae RepID=ADDA_THETN Length = 1204 Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 58/460 (12%), Positives = 130/460 (28%), Gaps = 101/460 (21%) Query: 385 EVEVLHDRLLAMLEED--------PTLTP---RDIIVMVADID--SYSPFIQAVFGSAPA 431 E V+ +R+ + E P RDI V++ + +Y+ F Sbjct: 535 EAHVVGERIKGLFREGFKVYDKEIGGYRPVEYRDICVLLRATEKWAYA------FEEEFV 588 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +P ++ +SLL + D+ +LA+L P+ F TEE L Sbjct: 589 KMGIPVFADTNAGYFDTAEIKTMLSLLQVIDNPMQDIPLLAVLRSPI----FSFTEEELV 644 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 +R +E A G Sbjct: 645 DIR------------------------------------------LEDADGTI--YEALK 660 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA--AM 609 ++S EL + + L L W+ + P++E+L + F+ Sbjct: 661 KASLREDELGEKVRNFLDSLKRWQEK-SIYMPVDEFLWYLYEE-TGFYSYVGAMPQGVER 718 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ--RFLAGPVNICTLMPM 667 + E + + L ++ V + ++ Sbjct: 719 QANLRVLFERAKEYEETSFKGLFNFVNFINRLRTTSTDMGSAKTVGENENVVRVMSIHKS 778 Query: 668 RSIPFKVVCLLGM---------NDGVYPRQLAPLGFDLMSQKPKRGDRS----------- 707 + + F +V + G+ N+ + +G + + + + S Sbjct: 779 KGLEFPIVIVAGLGKQFNTKDLNEKILYHHFLGIGPEFVDYRRRLSYPSIVKEAIKYKIK 838 Query: 708 --RRDDDRYLFLEALISAQQKLYISYIGRSIQD-----NSERFPSVLVQELIDYIGQSHY 760 ++ + AL A++KL + + I++ + + E D + Y Sbjct: 839 LESLSEEMRVLYVALTRAKEKLILVASVKDIKERAKKWGKAKLLGKKISEY-DVLKSRSY 897 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 + + + ++ + + D ++ Sbjct: 898 IDWIGSALIRHRDLKLLREFAEISPELEQDSSKWEVKIWN 937 >UniRef50_C6XX64 ATP-dependent nuclease subunit B n=2 Tax=Pedobacter RepID=C6XX64_PEDHD Length = 951 Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 54/377 (14%), Positives = 111/377 (29%), Gaps = 43/377 (11%) Query: 497 VNESGIRWGIDDDNVRELELPATGQHTW---RFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + SG+ ID + +LE+ TG+ ++ LT L G ++L E Sbjct: 361 LAASGVYGLIDLWSGCQLEIQQTGRLSYKNVEAFLTHPLTGLRQAMRDKINTALLAEKEI 420 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 LV + L E + L+ Sbjct: 421 EVPYTRLVNQKGLFEVFFKKLLHAGEVMEQLLEVMNFVLARLSHAGNLKKIDAELFAKAI 480 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 Q+ + + +P ++ + + + L+ R++ F Sbjct: 481 QELNRLYDTFGKHVDHEEIPF-IISLVQKAVMGLAVPLSGDPLKGIQVMGLLETRNLNFD 539 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD---RYLFLEALISAQQKLYIS 730 V +LG N+G+ P+ F S + G + D Y+ + A +S Sbjct: 540 KVVMLGFNEGIVPKSSVGNSFIPDSIRRVYGLPVLENQDAISAYMVYRLIQRASD---VS 596 Query: 731 YIGRSIQDNSER-FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 ++ S+ D++ PS ++++L +S + L+ + +K Sbjct: 597 FVYNSLTDDATSGEPSRILKQL---AYESGFEFNYHTLDLNVRTEPLKEITIKKEGNEAI 653 Query: 790 DPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 Q Y +T+ L ++ +P+ FF Sbjct: 654 ------QQGLQRY-----------------------LNKQKTLSPSALTQYILNPIDFFF 684 Query: 850 QMRLQVNFRTEDSEIPD 866 + E S + + Sbjct: 685 NYIAGIKEPKEISAVVE 701 >UniRef50_C9KN36 Helicase, UvrD/REP/exonuclease family protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN36_9FIRM Length = 874 Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 62/196 (31%), Gaps = 20/196 (10%) Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 A L ++ +R + RP + + D+ + E + + + + Sbjct: 697 FAELADCVSGFRHEAERMRPWQLLAKIVVDISIDAYYRRRGEEQRIENLRD----LFRQA 752 Query: 624 LGAQYGDAVPLSLLRDELA-QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + PL L L L + + I T+ + F V + G+ + Sbjct: 753 RAMDEKEVRPLDALTRFLNYVTLSNTNLDAVTKKQQIPIVTIHQAKGAEFDYVFVAGLQE 812 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 G +P A ++ LF A+ + +L++S+ Q Sbjct: 813 GTFPGPQAEKN-------------ESMAEEARLFYVAITRPKVQLFLSWCQ--TQHGHYT 857 Query: 743 FPSVLVQELIDYIGQS 758 S +++L Q+ Sbjct: 858 HMSRFLRDLPREYVQN 873 >UniRef50_C0Z545 ATP-dependent nuclease subunit A n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z545_BREBN Length = 1275 Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 59/395 (14%), Positives = 117/395 (29%), Gaps = 95/395 (24%) Query: 378 VCHSPQREVEVLHDRLLAMLEEDPT----------------LTPRDIIVMVADIDSYSPF 421 Q E ++ R+ +E L RDI++++ + Sbjct: 571 EASVAQLEARLIASRIRRWMEPGEGEEPLLVFDKKAGGMRPLAYRDIVILLRATSGWGQT 630 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 +Q +A +P + +E +SLL + D+ + A+L P++ Sbjct: 631 MQEELHAAG----IPVYAEQTAGYFAATEVETMLSLLRVIDNPLQDIPLAAVLRSPIV-- 684 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG--QHTWRFGLTRMLLGYAMES 539 + E+ L +R I + + L+ Q +W L + Sbjct: 685 --GLREQQLAQIR-------IHYATGPFHQAVLQYAEERPPQESWEKRLRQFF------G 729 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI---WRRGLAQERPLEEWLPVCRDMLN 596 G W++ G L+ LL L + +A ++ R + + Sbjct: 730 RLGLWRTEA-----------RRGALSELLTMLYRETGYLDYVAALENGQQRQANLRALYD 778 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 +A + + + + G + Sbjct: 779 RARQYEAGSYRGLFRFLRFVDRLQEAGNDMGEARTI--------------------GENE 818 Query: 657 GPVNICTLMPMRSIPFKVVCLLGM----NDGVYPRQ---LAPLGFDLMSQKP-------- 701 V I T+ + + F VV + GM N Q LGF M+ +P Sbjct: 819 DVVRIMTIHKSKGLEFPVVFVAGMGKQFNTMDLKSQFLLHKDLGFGPMAVEPSMQLRYPS 878 Query: 702 -------KRGDRSRRDDDRYLFLEALISAQQKLYI 729 ++ R ++ + AL A++KL + Sbjct: 879 LAALGIRQKLRRDMLAEEMRVLYVALTRAREKLIL 913 >UniRef50_A3DBW8 UvrD/REP helicase n=2 Tax=Clostridium thermocellum RepID=A3DBW8_CLOTH Length = 743 Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 60/450 (13%), Positives = 127/450 (28%), Gaps = 84/450 (18%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDS-SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 R E D+ RP +D I V S + E + + + M++ P + Sbjct: 336 RDSLLPQYIEPVPEDDPRPNPVIDEYGIKAAVFESWEDEARGVVTQTIHMIKNHPD---K 392 Query: 407 DIIVMVA---DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 I ++V + ++A R +P+ + D + + + + L Sbjct: 393 TIAILVPTAWKMSLVVNILEA--------RKVPFELLDNTSGERN---KTLKKLGR---- 437 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 ++ L VP E +NE + D + E T Sbjct: 438 ------IIDFLAVP----------EDGEKFSNMINECILTGDYDGPVFVDSE-DETRTMG 480 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 R L+ + Y +E ++ + + + L+ R+ L Sbjct: 481 QRELLSEFIKKYPVEKILYPVGGIIETSDVPKELLKT-KIWRDFTDSLDTVRQLLEFPNT 539 Query: 584 LEEWLPVCRDMLNAFFLPDAETEA----AMTLIEQQWQAI-IAEGLGAQYGDAVPLSLLR 638 + E L + F + + + Q +++ + Sbjct: 540 VVEKLILFIAEKLRFDREERAIAQKVAGDVRYLMNQNPRWRLSDLAFELLSPKNMFNYFA 599 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP------------ 686 + G V + T + + + +V L G+N+ +P Sbjct: 600 GVVWDL-----KGFEPKPGVVTVATYHKSKGLEWDIVFLTGLNNADFPVLLDDRFMGEFW 654 Query: 687 --RQLAPLGFDLM-------------SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 ++ L+ + L + A++ L++S Sbjct: 655 FLKEQYKNPQALIKSEMAKVFEGKIVKDSVLESKLETISERARLLYVGITRAKEYLFLS- 713 Query: 732 IGRSIQDNSERF---PSVLVQELIDYIGQS 758 S + N + PS EL YI ++ Sbjct: 714 ---SYEQNKGKRVELPSKYFFELRRYIEEA 740 >UniRef50_P64321 Probable DNA helicase II homolog n=61 Tax=Actinomycetales RepID=UVRD_MYCBO Length = 700 Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 15/181 (8%) Query: 574 WRRGLAQERPLEEWLPVCRDMLNAF-FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA- 631 + +++ V R +L + A+ Sbjct: 412 ALQRVSERDTDAALSDVVRAVLAPLGLTAQPPVGTRARERWEALTALAELVDDELAQRPA 471 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 + L L EL +R + + V + +L + + + V L+G+ DG P A Sbjct: 472 LQLPGLLAELRRRAEA---RHPPVVQGVTLASLHAAKGLEWDAVFLVGLADGTLPISHA- 527 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI-GRSIQDNSERFPSVLVQE 750 ++ P + +++R L + A+ L +S+ RS R PS + Sbjct: 528 -----LAHGP---NSEPVEEERRLLYVGITRARVHLALSWALSRSPGGRQSRKPSRFLNG 579 Query: 751 L 751 + Sbjct: 580 I 580 >UniRef50_C0GSZ1 Putative uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GSZ1_9DELT Length = 904 Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats. Identities = 116/781 (14%), Positives = 223/781 (28%), Gaps = 130/781 (16%) Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKL 306 W DI + ++ L + + + N + + W Sbjct: 89 LWEDIIRQSPHSRGLLHLEETARQAARAWTLFEQWNLQDQQDPALWSSPDHRAFLEWSTA 148 Query: 307 GRDYIYLLSDLESSQELDAFVDVTPDNLL----HNIQSDILELENRAVAGVN-IEEFSRS 361 RDY +E ++ + L H + + + L ++ ++ Sbjct: 149 FRDYTQGRGWMEEARHTRHVARMFEKGCLPCPAHLVLAGLENLSPVQEHILDVLDGLGCK 208 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 N D +IT ++E+ + LE D I V+V D+ S Sbjct: 209 INHLEPARNDPAITLMPLADREQEMRTCALWVRTKLESDHEQR---IGVVVPDLYSVRQE 265 Query: 422 IQAVFGSAPAD----RYLP-----YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 I F + LP Y +S R +P++ + + LL L E V A Sbjct: 266 IIHTFDAVLHPDTAFEPLPPEKRAYDLSLGRPLSGYPLIRSALHLLDLRLDPLPLETVSA 325 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 +L+ P L G + L + T ++ Sbjct: 326 VLNSPFLK------------------------GAKSETPARSGLETLLRKTREPQISFSF 361 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 L + W ++ LA L + L +P W Sbjct: 362 LLDKAADSSKSWSCLV---------------LARSLKAFQARIKELPSTQPPSAWAQDLD 406 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL----LRDELAQRLDQE 648 +L P T ++ Q QA A D V S L++ L++ Sbjct: 407 LLLQDLGWPGDITLSSHE--YQTVQAFNACLKRLAGLDRVMPSTGMSQATQTLSRILNET 464 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS-----QKPKR 703 V I ++ S F + ++G+ D +P+ P F +S P+ Sbjct: 465 IFQPEPPEVRVRIMGMLEAESESFDELWIMGLTDQAWPQSPEPSPFLPVSLQKHLDMPRS 524 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 + D R + L + + +SY R +++ E PS L++E+ PG Sbjct: 525 SPQHELDYARRIMHRLLQNTS-RAILSYPCR--EEDLELLPSPLLREISGL---EFNEPG 578 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 + L + +Q + A A+ G Q Sbjct: 579 LLPDPDPWAGLSPGEQL-----------KYFQNEQ----APPLSQASRAPGGTGVLRSQA 623 Query: 824 LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN-----------FRTEDSEIPDTEPFIL 872 L P +AF + R+ E F Sbjct: 624 L------------------CPFQAFARHRMHARSLEEPVVGLGPPERGIIMHAALEYFWQ 665 Query: 873 EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI 932 + + + ++ D + + + R F E + + +Q L + Sbjct: 666 SCRDQAALLNLTGDRRLQMID-QAVDQAIREMHSQRPQTMTSRFQELERERLQDLLQEWL 724 Query: 933 ACRQPGQSMEI-------DLACNGVQIT---GWLPQVQPDGLLRWRPSLLSVAQGMQLWL 982 A + Q ++ +++ NG+++ + +++ L+ M W Sbjct: 725 ALEEQRQPFQVQELEKRSNISINGLELNVVADRMDRLEDGRLVVIDYKS--GRHAMSEWF 782 Query: 983 E 983 + Sbjct: 783 K 783 >UniRef50_Q1JCJ8 ATP-dependent helicase/nuclease subunit A n=14 Tax=Streptococcus RepID=ADDA_STRPB Length = 1222 Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 88/678 (12%), Positives = 183/678 (26%), Gaps = 144/678 (21%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 EV ++ ++ L D + DI ++V+ + I F +P + Sbjct: 566 EVTIVAKEIIK-LHNDKGVPFEDITLLVSSRTR-NDIISHTFNQYG----IPIVTDGGQQ 619 Query: 445 -RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 + + L ++ ++ALL P F E+ L + Sbjct: 620 NYLKSVEVMVMLDTLRTINNPRNDYALVALLRSP----MFAFDEDDLARI---------- 665 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 + + + R ++G + L+G Sbjct: 666 --------ALQKDNELDKDCLYDKIQRAVIG--RGAHPELIHDT------------LLGK 703 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 L L L WR A+ L + + + + F+ ++A + A+ Sbjct: 704 LNIFLKTLKSWR-RYAKLGSLYDLIWKIFN--DRFYFDFVASQAKAEQAQANLYALALRA 760 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQE----RISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 + L + + L+ + + VN+ T+ + + F V +L Sbjct: 761 NQFEKSGYKGLYCFIKMIDKVLETQNDLADVEVAAPKQAVNLMTIHKSKGLQFPYVFILN 820 Query: 680 MNDGVYPRQLAPLGFDLMSQKP----------------------------------KRGD 705 D + F L Q + Sbjct: 821 C-DKRFSMTDIHKSFILNRQHGIGIKYLADIKVLLGETTLNSVKVSMETLPYQLNKQELR 879 Query: 706 RSRRDDDRYLFLEALISAQQKLYI--------SYIGRSIQDNSERFPSVLVQELI----- 752 + + L A+ A++K+Y S + + P L ++L+ Sbjct: 880 LATLSEQMRLLYVAMTRAEKKVYFIGKASKSKSQDITDPKKLGKLLPLALREQLLTFQDW 939 Query: 753 -----DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 D + + L P D ++ + E + A + L Sbjct: 940 LLAIADVFSTEDLYFDVRFIEDSDLTQESVGRLQTPQLLNPDDLKDNRQSETIARALDML 999 Query: 808 PAASQAGK-----------AHSEFVQPLPFTLPETVPLETLQR------FWAHPVRAFFQ 850 A SQ ++ L E + ++ +++ + P F + Sbjct: 1000 EAVSQLNANYEAAIHLPTVRTPSQLKAAYEPLLEPIGVDIIEKSSRSLSDFTLP--HFSK 1057 Query: 851 MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAG----- 905 +V + + LS+ Q LL+AL E D E + Sbjct: 1058 ---KVKVEASHIGSALHQLMQVLPLSKPINQQTLLDALREIDSNEEVKTALDLKKIESFF 1114 Query: 906 -DLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQ--VQPD 962 D G F + + + +E +V Q + G + + D Sbjct: 1115 CDTSLGQFFQTYQKHLYREAPFAILKVDPISQE-----------EYVLRGIIDAYFLFDD 1163 Query: 963 GLLRWRPSLLSVAQGMQL 980 ++ Q ++L Sbjct: 1164 HIVLVDYKTDKYKQPIEL 1181 >UniRef50_A1SGT8 UvrD/REP helicase n=1 Tax=Nocardioides sp. JS614 RepID=A1SGT8_NOCSJ Length = 1073 Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 104/695 (14%), Positives = 193/695 (27%), Gaps = 122/695 (17%) Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 I V+ D + VF A +P I P + ++ L+L Sbjct: 424 WAQIGVLTRDNA----HAEDVF-DALTSAGVPVEIVGLSGLLRLPEVAEIVATLTLLHDV 478 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + +L LL P R+ I LR L + E R G D + Sbjct: 479 TANAALLTLLTGP----RWAIGPRDLRLLGRRALEIAGRHGRGADAA-----------SI 523 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 L + G + L E + L +L + R + + Sbjct: 524 TDQLLEIADG-IDPAELPSLDDALADPGEHAYSPEALERFGLLSAELRMLRTYVGEP--- 579 Query: 585 EEWLPVCRDMLN------AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP-LSLL 637 L + R +++ + AA + +AE +P L Sbjct: 580 --LLDIVRRIIDTSGTDVELGSAVSPAAAARRDNLDLFVKAVAEFQAVDGDVTLPALLAY 637 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP------ 691 + + ++ A V + T+ + + + V L+G+ + +P + Sbjct: 638 LTAEDDQGNGLDVATPTEADSVKLLTVHRAKGLEWDSVFLVGVCETRFPSNRSRTLWTSS 697 Query: 692 ----------LGFDLMS---------QKPKRGDRSR-RDDDRYLFLEALISAQQKLYISY 731 DL + R +++ L A A ++L ++ Sbjct: 698 PAILPAPLRGDAGDLPQLAGHDKAALDAYRAATRDHDAEEELRLGYVAFTRAARRLSVTS 757 Query: 732 IGRSIQDNSERFPSVLVQELIDYI------GQSHYLPGDEALNCDESEARVKAHLTCLHT 785 S + + PS Q + D + P N ++ + Sbjct: 758 YLWSPRA-TPFGPSAYQQVVRDQLHDWAEPPTWLARPEKGDPNPYDAVDPSRPWPATGTG 816 Query: 786 RMPFDPQNYQPGERQSYA---------------REWLPAASQ-AGKAHSEFVQPLPFTLP 829 R R+ A EW + +A + L LP Sbjct: 817 REAALRIEAARRVREVDAAAVDAGLDMIETARVAEWDAELERLLAEARRDRSTDLAVPLP 876 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV 889 ++ L R P F + + R S + + + Sbjct: 877 PSLSATALARLREDP-ETFARELARPMPRPPSSAA--------------RFGTRFHAWVE 921 Query: 890 EQDDAERLFRRFRAAGDLP-YGAFGEIFWETQCQEMQQLADRVIACRQPGQ---SMEIDL 945 + + LF GDLP G + + A R P Q + L Sbjct: 922 ARFGQQDLFDY----GDLPGRADAGIDDDSDLKELIATFEAGPFATRTPHQVEAPFALVL 977 Query: 946 A---CNGVQITGWLPQVQPDG--------LLRWRPSLLSVAQGMQLWLEHLVYCASGGNG 994 G + G + V + ++ W+ + + A +QL L L + Sbjct: 978 RHPGGPGQVVRGRIDAVYAESTPEGDGFLVVDWKTNRAATADPLQLALYRLAWAELHDLP 1037 Query: 995 ESRL----FLRKDGEWRFPPLAAEQALHYLSQLIE 1025 R+ + + GE PP ++A L L++ Sbjct: 1038 LERVRAAFYYVRTGEVVEPPDLPDRAA--LEALLD 1070 >UniRef50_C0GR52 UvrD/REP helicase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR52_9DELT Length = 713 Score = 73.5 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 34/241 (14%), Positives = 79/241 (32%), Gaps = 27/241 (11%) Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 W+ GL +L G ++AQ +Q + + + Q Sbjct: 403 DPPEILAWKRGLG-LLKGVGPKTAQRLYQ--AYCTSLTSGDGSELKKFETKNEQFAGLME 459 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ--WQAIIAEGLGAQYGDAVPL 634 L +++ L + F+ P E + L + + + + +A Sbjct: 460 LLRRQKNLPASPSSFLTEVLDFYRPFLEEKHMEDLPRRLSGLEQLEQITSAYNHLEAFLA 519 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 ++ + + + + + + + T+ + + + V L+ + + +P + A Sbjct: 520 DMVLE------NSDPVGMQAREDALVLSTIHSAKGLEWSAVLLIDLVEERFPSRRAMQ-- 571 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI----GRSIQDNSERFPSVLVQE 750 D D+++ L A A+ L + RS N +PS V+E Sbjct: 572 ----------DPDDMDEEQRLLYVACTRARDYLGLFVPQSIYQRSTGFNQRVWPSPFVRE 621 Query: 751 L 751 + Sbjct: 622 I 622 >UniRef50_A4W0M7 ATP-dependent helicase/nuclease subunit A n=61 Tax=Streptococcus RepID=ADDA_STRS2 Length = 1227 Score = 73.5 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 48/384 (12%), Positives = 105/384 (27%), Gaps = 90/384 (23%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E+EV+ ++ L + +DI ++V +++ I ++F +P A Sbjct: 576 EIEVVAKEIIR-LHNEEGADFKDITLLV-QKRTHNDLIMSIFE----KHGIPIVADGGAA 629 Query: 445 RQSHPV-LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 + + + L + ++ ++ALL P F E+ L + Sbjct: 630 SYLQSLEVMIMLDTLRVINNPLNDYALVALLKSP----MFRFDEDELTRIS--------- 676 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 + G + E + +L Sbjct: 677 ---------------------------LQAGTGFFYQKMEIAQQASGQHPELMSEKLKKK 709 Query: 564 LASLLMQLNIWRRGLAQERPLEE--WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 + L L WR A+ + + W + + A+ Sbjct: 710 ITDFLSILENWRA-YAKLHSIYDMIWKMFNEKFYYDYVGALPNGSKRQANLY----ALGL 764 Query: 622 EGLGAQYGDAVPLSLLRDELAQRL----DQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 + LS + + L D + + V + T+ + + FK V L Sbjct: 765 RANQFEKTGYKGLSRFIAMIDRALANDKDLADVQEFLPQNAVQLMTIHKSKGLEFKYVFL 824 Query: 678 LGMN-----DGVY-------------------------PRQLAPLGFDLM--SQKPKRGD 705 + ++ + Y P + + + + Sbjct: 825 MNIDKRFNLEDHYQSVIISRKNGLGIQYLADMKDKVNSPLPQVRVLMNTLPYQNNLQELK 884 Query: 706 RSRRDDDRYLFLEALISAQQKLYI 729 + + L AL A++KLY+ Sbjct: 885 IANLSEQMRLLYVALTRAEKKLYL 908 >UniRef50_A8L2J8 UvrD/REP helicase n=2 Tax=Actinomycetales RepID=A8L2J8_FRASN Length = 759 Score = 73.5 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 62/185 (33%), Gaps = 16/185 (8%) Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA-EGLGA 626 + L R +RP V D+L+A A ++W+ + A L A Sbjct: 444 VRMLRAALRSAETDRP-GGLADVVADVLSALGWRPGAPPAGPGADRERWENLAALHRLAA 502 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 P + L A ++ V + +L + + + V L+G+ DG P Sbjct: 503 DLEAREPEADLAAFAADLAERAAHQHTPTVQGVTLASLHAAKGLEWDAVFLVGLVDGTLP 562 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI-GRSIQDNSERFPS 745 A + ++R L + A+ L +S+ R+ R PS Sbjct: 563 IVHAQTD-------------EQLAEERRLLYVGVTRARVHLTLSWALARAEGARRSRRPS 609 Query: 746 VLVQE 750 + E Sbjct: 610 RFLDE 614 >UniRef50_Q1QX44 UvrD/REP helicase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QX44_CHRSD Length = 729 Score = 73.5 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 69/196 (35%), Gaps = 29/196 (14%) Query: 560 LVGHLASLLMQ-LNIWRRGLAQERPLEEW--LPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 L+ L L + L + L + L W + ++ A D + A + + Sbjct: 447 LLSALKPLQRRNLKRRWQLLCELPRLGHWPPAKLLEHVVEA-TEADKALKRAASRRAKAE 505 Query: 617 QA--IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 ++ + A + L+Q ++ V + T+ + + + + Sbjct: 506 DDVRLLDVLIEQAGELANDPDAFIELLSQPVEG-------RGDGVLVTTVHGAKGLEWPL 558 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V L G+N+ +P D R +++R L+ A+ A+++L + Sbjct: 559 VALWGVNEEDFPHYTRETPL----------DAERLEEERRLYYVAITRARERLLV----- 603 Query: 735 SIQDNSERFPSVLVQE 750 + D + PS + E Sbjct: 604 -LHDGGDHRPSRFIDE 618 >UniRef50_Q12BA3 RecB family exonuclease-like n=4 Tax=Comamonadaceae RepID=Q12BA3_POLSJ Length = 856 Score = 73.5 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 88/535 (16%), Positives = 153/535 (28%), Gaps = 123/535 (22%) Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 + + LL ++ VL L ++ + + ++G+R Sbjct: 309 AASLMGLLRAMPWDASTDAVLDWLKNAP-----GVSPGEVTAAETELRKAGLR------- 356 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 +LPAT Q + L +Q Sbjct: 357 -AWRDLPATPQPAF-------------------------------------AATQQLALQ 378 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA-ETEAAMTLIEQQWQAIIAEGLGAQYG 629 ++ R+ L + RPL WL R L + DA E + A + + + + EG A++ Sbjct: 379 VDALRKALGRTRPLASWLRDLRAALQSAGQWDALEIDNAGQTVLEVLR--LHEGAEAEFD 436 Query: 630 D--AVPLSLLRDELAQRLDQERISQRFLAG-PVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 + L+ + Q L+ + S G V I L + P + V L G ++ P Sbjct: 437 SAPTMALASFTSWVNQALEGGKFSPEHPQGEQVVILPLAQLLGRPMQAVVLPGCDEIRLP 496 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD-----NSE 741 P G Q+ G SR L + A + + Sbjct: 497 VSPEPAGLWTPGQREVLGLPSRD------MLASANRAAWHYVLQLPHVDLLWRTSEAGEH 550 Query: 742 RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQS 801 PS VQEL+ + Q+ + + Sbjct: 551 LIPSGFVQELL--LAQAGHGDSP---------------------------------ALAT 575 Query: 802 YAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 +R P A Q + LP T + + P R F +L++ E Sbjct: 576 DSRRLRPVAIQPTPRPMPTGEALPVT---RLSASAYEDLRRCPYRFFALRQLRLQESGEL 632 Query: 862 SEIPDTEPFI--LEGLSRYQINQQLLNA----------LVEQDDAERLFRRFRAAGD--L 907 D F L + RY + L A + AER+ + + L Sbjct: 633 DSELDKRDFGNWLHSVLRY--FHEALKAAPTPELSAREAMINLAAERVTQAMALSDSEFL 690 Query: 908 PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPD 962 P+ A E + + E+ +Q+ G L ++ Sbjct: 691 PFAAIWPRVREGYLAWLTDHEAEGARFEEAEAEREM--PLGKLQLIGKLDRIDRQ 743 >UniRef50_D2SFF2 UvrD/REP helicase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SFF2_9ACTO Length = 1062 Score = 73.5 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 97/652 (14%), Positives = 191/652 (29%), Gaps = 65/652 (9%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 R VA + + + HV S E + D L D + Sbjct: 339 RRVAEALPGPWEHRRLAAVEGAEEGAAEVHVFGSASVEAAYVADTLRRAHLVD-GVPWSG 397 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSRFV 466 + V+V + P A +P + +D + P + ++ L R Sbjct: 398 MAVVVRTALAIGPL-----RRALTSAGVPVEVGTDDLPLAAQPAVAPLLAALGALLPRPG 452 Query: 467 SEDVLALLDVP-----VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 +E LD P + +A T LR LR+ V + R G+D D P Sbjct: 453 AEPGTLALDEPGAEALLTSALGGATVLDLRRLRRAVRIAQARRGVDADER---GAPLATA 509 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 T L + A + + VL + + + Sbjct: 510 LTDEGLLEELPDAVARPARR--VADVLAAGRVALARDGSAEDV---------LWAMWQRS 558 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ--WQAIIAEGLGAQYGDAVPLSLLRD 639 W A + D + +A + L + + + + + + L Sbjct: 559 GLAGRWARASAAGGAAGAVADRDLDAVVALFDAAAGFVDRLPSATVGAFVEHLSAQELPG 618 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP---LGFDL 696 + V + T + + + VVC+ G+ +G++P LG ++ Sbjct: 619 VGGAGRESA-------TDAVRLLTAHASKGLEWDVVCVAGVQEGIWPDLRDRGTLLGTEV 671 Query: 697 MSQKPKRGDRSRRD-------DDRYLFLEALISAQQKLYISYI-GRSIQDNSERFPSVLV 748 + ++ D + D ++R LF A A+++L ++ + G ++ S + Sbjct: 672 LVERVAGIDGAVLDRRVQMLAEERRLFYVACTRARRRLVVTAVEGALDGPDAGATASRFL 731 Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP 808 +L+ + + + ++ + A E +P Sbjct: 732 -DLVVPPPDDGRPLTPLPRSLTLPALVAELRRAVSDPQTEPARRSAAAAVLRRLADEGVP 790 Query: 809 AASQAG----KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 AS A S+ +P V ++ F P++ L Sbjct: 791 GASPADWWGLAPLSDDAPLVPDGEAVRVRPSAIETFQRCPLKW----VLGAV---GAEAS 843 Query: 865 PDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEM 924 PD + + + + QQ+ L L DL G + + Sbjct: 844 PDATRTVGSAV--HAVAQQVAEGLPAAGAPAALAEELDQL-DLGPGWADQRQRIAARDML 900 Query: 925 QQLADRVIACRQP---GQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLS 973 + R A + D+ +I G + +++ DG R L Sbjct: 901 DRFL-RWHAANGRELLAAEADFDVTVGRARIRGQVDRLERDGAGRLVVIDLK 951 >UniRef50_D1YBS7 HRDC domain protein n=3 Tax=Propionibacterium acnes RepID=D1YBS7_PROAC Length = 706 Score = 73.5 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 80/279 (28%), Gaps = 41/279 (14%) Query: 477 PVLAARFDITEEGLRYLRQWVN---ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 + + W+ +GI W + L R+ Sbjct: 342 EPIYQALGDDASEASAVAMWIESRHAAGIPW------------------SEIAVLYRI-N 382 Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD 593 A + + +PY G + L L PL + + Sbjct: 383 SQAAQLETALAERSIPYLVKGSERFYDRGEVRRSLDALARLAADEPGADPLRAFDRILAA 442 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 + E E + + QA+ + L L ++R + Sbjct: 443 --QGWSAIAPEGEGDVRQRWESLQALHDLTVSVVDDGTRTLEQLAAVFSRRAATQE---A 497 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 + V + TL + + + VV L G+ND + P +A + +R Sbjct: 498 PVGDGVTLATLHASKGLEWDVVALYGINDTMVPFIMAE-------------APAEVASER 544 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 L + A++ L++SY S + + S ++ L Sbjct: 545 RLLHVGVTRARRDLWVSYS-WSGGNRDRQGISRFLRGLP 582 >UniRef50_C7GZ83 Putative ATP-dependent exoDNAse beta subunit n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ83_9FIRM Length = 1289 Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 50/398 (12%), Positives = 111/398 (27%), Gaps = 53/398 (13%) Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 L DI V+ I I+ A +P + + +L Sbjct: 563 QKKLKFSDIAVLFRSIKGRGKKIK----LALELLGIPTNMQASGDILDFKEVNLLHCILK 618 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 L + + ++ +L PV + T + + +R WG ++ + Sbjct: 619 LTANFYDDLSLVTVLLSPV----YGFTPQDIAEIR--------IWGDENGYKAQPFYACF 666 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 + + A ++ D EL + + +R Sbjct: 667 LAFSKNLCRD--------DDAGENGETNGNGDALKNEDCELFVKARDFVNDILRFR-SYG 717 Query: 580 QERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP--LS 635 L ++ + F ++ IE+ E + + L Sbjct: 718 YALSLHVFIKRVCTETGIYEFAEALKQSRNPCGNIERYI-DFAHEFERERGIATLSDLLL 776 Query: 636 LLRDELAQRLD-QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM-------------- 680 + D L ++ + V+I T+ + + F +V + G Sbjct: 777 YIEDLYKNELAIEQEEREGENTNAVSIMTIHRSKGLEFPMVVVAGCGSNFVKTKSASYIE 836 Query: 681 ---NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR----YLFLEALISAQQKLYISYIG 733 N G++ R + G + + + +D + +F A A+ L S Sbjct: 837 FDKNHGMFMRYMGADGLVGIPHREILHKYAEKDAEYDEAMRIFYVACTRAKDFLVFS-AV 895 Query: 734 RSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 + S S + D + + + ++ +E Sbjct: 896 TDGKKGSIITYSSFYDVINDTLVCNEEINKEKWFEYEE 933 >UniRef50_C8X5I7 UvrD/REP helicase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X5I7_DESRD Length = 1027 Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 55/144 (38%), Gaps = 7/144 (4%) Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 WQ+ + L + D L LA++ + + R V + TL + + F V Sbjct: 871 WQSRAFQQLQQAFADQGDWEALLTWLARQDTLDTVRHR--VEKVRLMTLHASKGLEFTAV 928 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 L + +G+ P G + ++ R +++ LF L A++ LY+S+ Sbjct: 929 FLPALEEGLLPYGAGDFGSN---EENTALTADRLAEEKRLFYVGLTRAKRYLYLSHSQER 985 Query: 736 IQDNSER--FPSVLVQELIDYIGQ 757 PS +Q L + Q Sbjct: 986 RLYGQTLAGRPSRFLQSLPPSLVQ 1009 >UniRef50_C6WM78 UvrD/REP helicase n=4 Tax=Actinomycetales RepID=C6WM78_ACTMD Length = 1349 Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 79/555 (14%), Positives = 149/555 (26%), Gaps = 68/555 (12%) Query: 320 SQELDAFVDVTPDNLLHNIQS--DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFH 377 + + F LL + ++ ++L L N + + + + Sbjct: 345 PRFREDFPPADKYELLTSFRNPPEVLHLANAVSGPLRAAGLDVAPLRHREGVEPGDVRIG 404 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLT--PRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 + + E+E L D + + P V+V P I AV DR L Sbjct: 405 LFPDVRAELEWLADTVAEQWRAHVDTSDEPPTAAVLVRRRSD-MPAIAAV----LRDRGL 459 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 P + P + S L + LL + + Sbjct: 460 PVEVVGLGGLLDEPEVRDLTSALRVLVDPLAGTAATRLL-TGSRWRIAAFDLAAMWQRAR 518 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + + R D+D + L G+H+ + GL A + Y Sbjct: 519 DLAGAPARKSPDEDPLSVLADALPGEHSEQAGL---------ADALDDPGDPSAYSAEGY 569 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERP--LEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 +G +L RR L Q P + + + A P A + Sbjct: 570 RRIRRLGA------ELAALRRRLTQPLPELVADVERTLLLDIEAVARPGGVGRAHLDAFA 623 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 A A + + L + V + T+ + + ++ Sbjct: 624 DVVSDFAAASPAATLPALLDYLRTAEHAEDGL--APGEVEVVDNRVQLVTMHSAKGLEWR 681 Query: 674 VVCLLGMNDGVYPRQLAP----------------LGFDLMSQKPKRGDRSRRDDDRY--- 714 +V + + V+P + DL + G + ++ Sbjct: 682 IVAVPHVVKDVFPGRRKSASWLKSVTELPAALRGDAQDLPELRVPGGANRKEVEEALDRH 741 Query: 715 --------------LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 L AL ++ L +S + + PS + EL + + + + Sbjct: 742 ADEFEERRLVEERRLLYVALTRSEHSLLVSGHWWGETGATPKGPSAFLTELREVVTTAEH 801 Query: 761 LPGD----EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 P D E E + A P DP + + A + A + +A Sbjct: 802 PPADVAHWAPAPGPEDENPLAAKAKTAQW--PADPLGSRRDAVSAGAAMVVAALDRLREA 859 Query: 817 HSEFVQPLPFTLPET 831 P E Sbjct: 860 AEHEPPGEPDEPDEP 874 >UniRef50_Q2J6E2 UvrD/REP helicase n=1 Tax=Frankia sp. CcI3 RepID=Q2J6E2_FRASC Length = 1103 Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 65/384 (16%), Positives = 124/384 (32%), Gaps = 44/384 (11%) Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS-DR 442 E E + D LL + + + V+V + A +P + D Sbjct: 377 AEAESVAD-LLRREHLENGVAWDAMAVLVRTAERIGRL-----RRVLAAAGVPVSADGDD 430 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 P + L + + V + + GLR L + + Sbjct: 431 LPVAQEPAAALLLLALRCAEDPAGALTV-DAARTLLTSPLGGADPAGLRALGRAL----- 484 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 ++ D E P+ L A + W + +P D+ +G + + G Sbjct: 485 -RTLERDAGSEHPAPSAE------------LLRAAVAEPDHWLATIP-DDLAGPVRRVGG 530 Query: 563 HLASLLMQLNIW----RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 L + L + L EW R A + + + + A Sbjct: 531 LLRTAGQALRDSSGAPQDALWALWSASEWPARLRHASAAGGAAGRAADRDLDAVVALFDA 590 Query: 619 IIAEGLGAQYGDAVP--LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 + G G V ++ L + + + V + T + + ++VV Sbjct: 591 VTRLGQRRGPGGGVASLVAELTRQQIAGDVLKPAGESVRRRGVRLLTAHRAKGLEWEVVV 650 Query: 677 LLGMNDGVYP---RQLAPLGFDLMSQKPKRGDR------SRRDDDRYLFLEALISAQQKL 727 + G+ DG +P + + LG + + + G R D+R LF AL A+++L Sbjct: 651 VCGVQDGTWPDLRERHSLLGAEQLDAPSRGGLRPPLTRQDLLADERRLFYVALTRARRRL 710 Query: 728 YISYIGRSIQDNSERFPSVLVQEL 751 ++ + D S PS ++EL Sbjct: 711 VVTAVNSPEDDGS--LPSRFLEEL 732 >UniRef50_D1U5K5 UvrD/REP helicase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5K5_9DELT Length = 715 Score = 73.2 bits (178), Expect = 5e-11, Method: Composition-based stats. Identities = 32/242 (13%), Positives = 74/242 (30%), Gaps = 40/242 (16%) Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETEAAMTLIEQQWQAIIA 621 L LL +L+ R + + E + +++ + + +A + + Q Sbjct: 449 LRELLNELDGLRAMAGRPSAILERILAFYQPILIDKYPDDYPKRQAGLEQLGQIAHNYTD 508 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 LD + ++ V + T+ + + + V ++ + Sbjct: 509 -MDQLLGD-------------LSLDGDPDDEKRKENAVVLSTIHSAKGLEWSAVIIIDLV 554 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS-----YIGRSI 736 + +P + A + D +++R L A A++ L + Y +S Sbjct: 555 EERFPSRKAM---------QRPED---LEEERRLMYVACTRAKECLTLFVPSSVYNRQSG 602 Query: 737 QDNSERFPSVLVQELIDY----IGQSH--YLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 + PS V EL + +S+ L ++ S P Sbjct: 603 ISD-PTLPSPFVLELPSTVFTPLKESYGGSLEKRWPVDSRPSFGTAAKSAVREQDAQPVQ 661 Query: 791 PQ 792 + Sbjct: 662 AR 663 >UniRef50_UPI0001BCEB30 UvrD/REP helicase n=1 Tax=Campylobacter fetus subsp. venerealis str. Azul-94 RepID=UPI0001BCEB30 Length = 283 Score = 73.2 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 45/116 (38%), Gaps = 17/116 (14%) Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 + + L + + V++ T+ + + F +V ++ + +P Sbjct: 176 DVFYNFLTLGRTEMSEGE-----GVSLLTVHASKGLEFSLVFVVDLAQNRFP------NL 224 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 LM G +++R LF A+ A+ +LY+SY + PS ++E Sbjct: 225 KLM------GMGGSLEEERRLFYVAVTRAKDELYLSYAKYDKIRKIDYKPSCFLEE 274 >UniRef50_C4XND8 UvrD/REP helicase family protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XND8_DESMR Length = 1055 Score = 73.2 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 5/100 (5%) Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 A V I ++ + + F V L + DG+ P + L + R D++R Sbjct: 934 RAEKVRIMSIHAAKGLEFGAVFLPALEDGLLPFAGSDF---LSGKPGHPAGRMDEDEERR 990 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELI 752 LF L A+ +LY+S+ R + S + L Sbjct: 991 LFYVGLTRAKSRLYLSHALRRELYGRKLRLKRSRFLDALP 1030 >UniRef50_B8DQ46 UvrD/REP helicase n=13 Tax=Desulfovibrionales RepID=B8DQ46_DESVM Length = 789 Score = 73.2 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 66/216 (30%), Gaps = 31/216 (14%) Query: 564 LASLLMQLNIWRRGLAQERPL-EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L + L L+ R+ L EE + + + A F + +EQ Q + Sbjct: 461 LRADLDLLDGLRKRPHTPTSLLEEVMEHYKPRMEAAFP--DDWPRRQQGLEQLLQIAASY 518 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + + L + V + T+ + + + V L+ + + Sbjct: 519 RDLDLFISDLSLED------------PGEEEENRDSVVLSTIHSAKGLEWGAVLLIDLVE 566 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG----RSIQD 738 +P + A + +++R L A A+ L + R Sbjct: 567 ERFPSRHAIARAEDF------------EEERRLMYVACTRARDHLCLFVPASLYSRGDGG 614 Query: 739 NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 N PS V+EL ++ + L ++ Sbjct: 615 NQPAVPSPFVRELPAHLFDEMHESYSGGLMRRDAPN 650 >UniRef50_B2A7U7 LexA repressor n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A7U7_NATTJ Length = 815 Score = 72.8 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 21/106 (19%) Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 F V + T+ ++ + +KVV ++G+N+ V P DL + +R Sbjct: 413 FSDDKVKLLTMHSIKGLEYKVVFIIGINENVIP-YSPDGNIDL----------EQESMER 461 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL-IDYIGQS 758 L + A+ KL+++ G PS + ++ Y+ + Sbjct: 462 RLLYVGMTRAKDKLFLTSSG---------NPSKFINDINPKYLKLN 498 >UniRef50_C5VEC6 ATP-dependent DNA helicase n=2 Tax=Corynebacterium matruchotii RepID=C5VEC6_9CORY Length = 1095 Score = 72.8 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 103/730 (14%), Positives = 194/730 (26%), Gaps = 124/730 (16%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS----ITFHVCHSPQREVEVLHDRLLA 395 ++L L N V + +PL S+ I + E E + D L Sbjct: 354 PEVLHLANAVATTVLGAPSDPNRPVQPLSSPPSAVAGDIQLGYFPTIADEREFVADTLAE 413 Query: 396 MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 + T P V+V ++++ I F R +PY I P + + Sbjct: 414 LYNNRDTAKPFTAAVLVRQ-NAHTGPIAKEFQR----RGIPYEIVGINGLLDVPEVADMV 468 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 ++ ++ S L +L P + + ++ L R + Sbjct: 469 AVATMLIRPTDSAAALRILGGPAV----GLGVRDIQAL--------ARRAGELSGRATSG 516 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQ--GEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 + A ++ G ++ E E L L QL Sbjct: 517 KATDSVDPAVKLGEEIAEVLAADAENIVGLTDAIADLGEPEKYSEEGYRRLGRLSSQLRR 576 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ--WQAIIAEGLGAQYGDA 631 R+ +A L + ++ + + + E Sbjct: 577 LRQTVAAGSSLPDLFAEIERVMGIRTEVLSRENPRLDGAVGTIHLDKLHQEVANFATIPN 636 Query: 632 VPLSLLRDEL------AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 LS L D L+ + R V I T+ + + + VC+L N+ Y Sbjct: 637 TTLSQLLDYFTEARCQESGLELGEVQVR--NDRVQILTVHKAKGLEWNTVCVLHANNRDY 694 Query: 686 PRQLAPL--------GFDLMSQKPKRGDR------------------------------S 707 + A L + GD S Sbjct: 695 DKTRASTWLTNPAMVPSTLRGDAAESGDTVGSPVLDTSWLENRAQLEAECAAHIEEFRQS 754 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV----QELIDYIGQSHYLPG 763 ++ LF A+ A Q+L ++ + S + D I H Sbjct: 755 LSEESTRLFYVAVTRAAQRLIVTASALDDNERDTEPCSNFLLIKRNASTDSIVAWHDPAE 814 Query: 764 DEALNCDESEARVKAHLTCLHTR---------------------MPFDPQNYQPGERQSY 802 A + + + V+ T + + DP + Sbjct: 815 AAATDTSDEPSEVQQSPTGMFPKPTKTVDLLTGADLVRKAIAQQSVGDPIAFNQDN--DL 872 Query: 803 AREWLPAASQAGKAHSEFVQPL-PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 + W + + + + L + + +P F + + R Sbjct: 873 FQLWEKDVTALIEEYQRLQSDIVEVELSPELTATDIVALKQNP-EQFARRQ-----RRPV 926 Query: 862 SEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC 921 PF RY ++ +EQ +LP G EI Sbjct: 927 -------PFKPN---RYAKRGTEFHSWLEQRFGA---PTLLDESELP-GMDEEITPGQLQ 972 Query: 922 QEMQQLADRVIACRQPG-QSMEIDLACNGVQITGWLPQVQPDG----LLRWRPSLLSVAQ 976 + + A R P +++ +G+ I G + V D ++ W+ L Sbjct: 973 ELKDKFVAGQFADRTPMFVEQPFEVSIDGIVIRGRMDAVFRDESGWHIVDWKTGQLPSRA 1032 Query: 977 GMQLWLEHLV 986 M+ + L Sbjct: 1033 DMRYLMMQLA 1042 >UniRef50_A6LY54 UvrD/REP helicase n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LY54_CLOB8 Length = 691 Score = 72.8 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 26/206 (12%), Positives = 65/206 (31%), Gaps = 25/206 (12%) Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 + LL +++ + + + EE F T A ++ A++ + Sbjct: 422 SELLEKMHEFLNKCSDIKMAEEIYNYF-----EFDKYIKPTSATYIDDKEAIYALLDIII 476 Query: 625 GAQYGDAVPL-----SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 +P + ++ + V + TL + + F V + G Sbjct: 477 EYVKEKQMPFLDGLREFINSSALYGVNILKKDINSDIDSVKLMTLHASKGLEFSYVFITG 536 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 +N G+ P + ++++ LF + A+ L +SY Sbjct: 537 VNYGLIPLHTRDM---------------EEEEEQRLFFVGITRAKDYLELSYYTNPDYQK 581 Query: 740 SERFPSVLVQELIDYIGQSHYLPGDE 765 + S + + + + Q+ + + Sbjct: 582 AAPGESRYIHMIPEKLIQNDKVKSNN 607 >UniRef50_A6LT39 UvrD/REP helicase n=18 Tax=Clostridium RepID=A6LT39_CLOB8 Length = 671 Score = 72.8 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 33/299 (11%), Positives = 91/299 (30%), Gaps = 41/299 (13%) Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 L + S V+ +L + F + + + ++ D + L + Sbjct: 340 LYRTNIESMSVIDVLTKRKIP--FTLLDREYNFFEHFICR-------DLISYLRLSVDEF 390 Query: 520 GQHTWRFGLTRMLL------GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 ++++ + R + +++ E L L +N Sbjct: 391 DRNSFLQIINRPFRYISKGNLFYIKNYDREESPFTIIISKEDTPPFQKKKLDELRKDIN- 449 Query: 574 WRRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 + ++ + + RD L + + + +E + + Y Sbjct: 450 YLNKISLSSAIAYIVMDLGYRDYLQKY---ANKFNQSFEDLEDIIEEF--KLSAEGYKTI 504 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 +E+ Q +++ + ++ V + T+ ++ + FK V ++ + P + Sbjct: 505 FEFLEHIEEVKQSIEESK--RKTKREGVILSTIHGVKGMEFKNVYVINCVEETIPHASSI 562 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 + +++R LF + A LY+ + + S + E Sbjct: 563 --------------KENIEEERRLFYVGITRAIDNLYLFSP--RSRKGQFKDVSRFIIE 605 >UniRef50_A4WWS4 RecB family exonuclease-like protein n=41 Tax=Proteobacteria RepID=A4WWS4_RHOS5 Length = 1000 Score = 72.8 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 87/640 (13%), Positives = 173/640 (27%), Gaps = 104/640 (16%) Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 P+ E L ++ + ++ +D + V + + Sbjct: 322 LIEAAGPRAE--ALAVAIILRKAAEDGRRA---ALITSD----RGLTRQVAAALDRWGIV 372 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 P + R S P + L R E +L LL P+ A D Sbjct: 373 PDDSAGRPLALSAP-GRFLRHVARLFGQRLTGEALLTLLKHPLTATGSD----------- 420 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + +RW D L R + W P D Sbjct: 421 --RGNHLRWTRD----------------LELHLRRKGPPFPTGGDLDLWAGARPDDGV-- 460 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET--EAAMTLIE 613 A+ L L+ L+ + E + A Sbjct: 461 --ADWARWLGGLIEGLDAVGNRPLSDHVAAHLALAEALAAGPAGTGTGELWLKEAGEAAR 518 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + + E + L D + R + Q + I + R Sbjct: 519 AAVEELRREAPHGGELTTADYTDLFDAILARGEVREAVQAHP--GLMIWGTLEARVQGAD 576 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA----LISAQQKLYI 729 +V L G+NDG +P+ P + + + G +R + L A A ++ + Sbjct: 577 LVILGGLNDGTWPQLPPPDPWLNRQMRLRAG---LLLPERRIGLSAHDYSQAVAAPEVVL 633 Query: 730 SYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 + R+ + +E PS + L++ + G EAL + Sbjct: 634 TRATRNAE--AETVPSRWLNRLMNLMSGLKAQGGPEALEAMRARG--------------- 676 Query: 790 DPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 + + E + A QP P+ + + ++ P + Sbjct: 677 --RGWLALASALEQPE-----APVPLAARPAPQPPVSARPDRLAVTGIRTLIRDPYAIYA 729 Query: 850 QMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAA----- 904 + L++ PD R I ++L V+ RA Sbjct: 730 RHILRLYPLDPLHRAPD-------ARLRGSILHRILEEFVKDRAPGTDRAAERARLMRIA 782 Query: 905 -----GDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG----QSMEIDLACNGVQIT-- 953 ++P+ A ++ + + A + +DLA +T Sbjct: 783 ETVLTDEVPWPAARALWLARLDRAADFFLETEAAHGGTPVVLEEEGRVDLAPLRFTLTAK 842 Query: 954 -GWLPQVQPDGL--LRWRPSLLSVAQGMQLWLEHLVYCAS 990 + ++ L L ++ + + + + L+ A+ Sbjct: 843 PDRIDRLPDGRLHILDYKTGTPPTRKQQEQFDKQLLLEAA 882 >UniRef50_C8P261 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P261_ERYRH Length = 1040 Score = 72.8 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 49/399 (12%), Positives = 121/399 (30%), Gaps = 97/399 (24%) Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 E + ++ D+ F R + + ++ + +D++++V Sbjct: 490 PAQSEDTHPVEIHIIEKHDN--RFKKTSDQLR-AQHIAQEIINYHSQ--GYRFKDMVILV 544 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 S +++ F +P+ I D+ ++ + ++LL+ + F ++ Sbjct: 545 RSHAS-KGYLKEAFEEY----NIPHYIDDQSGFYKSEIIASVVALLNYATT-FHDFYLVP 598 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 +L P ++ +++ + L + ++ S IR ++ +N + +WR Sbjct: 599 VLTSPF----YNYSDDQIAAL-KLMDASSIRKALEIENPELYQSLDDMVLSWRS------ 647 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 L S++ ++ L++ Sbjct: 648 -----------------------------KDLISIIQEIIQLNDVYNNTLSLQDKTN--- 675 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 L+ + +A Q + +AE +A PL+ Sbjct: 676 --LDFLLEKAIQYQAVSVPTLQGFVRFVAEFKDDTSSEASPLNK---------------- 717 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCL----------------------LGMNDGVYPRQLA 690 A V T+ + + F +V L +G+N P + Sbjct: 718 --DADIVTAMTIHQSKGLQFPIVFLWGMGRHAVRDHSDILLNDDTFGIGLNHVELPMRFV 775 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + + + D +++ L AL Q+ L + Sbjct: 776 SRNL-IRTVMEIKQDNEEIEENLRLLYVALTRPQKHLIL 813 >UniRef50_A7B8W1 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7B8W1_9ACTO Length = 674 Score = 72.8 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 69/219 (31%), Gaps = 21/219 (9%) Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 ++W + A A A L+ EL +R+ V + T+ + + + Sbjct: 441 ERWSNMNAIVGWADDSKAETLAAFVAELDERVA---YQVEPDKAGVELATIHAAKGLEWD 497 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 V L+G+ +G+ P A + R+++R L A+ A+ L +S+ Sbjct: 498 AVFLVGVAEGLLPISYAKTA-------------AAREEERRLLYVAVTRARDLLTLSWAR 544 Query: 734 RSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 D + L+D I G S + + + Sbjct: 545 SRGTDGRGKRKR---SRLLDGIWPEDARVGAPKKKARASTRALNQAFEEEASPQAIELFG 601 Query: 794 YQPGERQSYAREW--LPAASQAGKAHSEFVQPLPFTLPE 830 R +R+ P A + + Q +P + Sbjct: 602 RLKAWRLEVSRQAGVPPFAVFTDQTLRDITQAMPKNTTQ 640 >UniRef50_B2GEY4 ATP-dependent helicase/nuclease subunit A n=3 Tax=Lactobacillus fermentum RepID=ADDA_LACF3 Length = 1337 Score = 72.8 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 54/395 (13%), Positives = 120/395 (30%), Gaps = 57/395 (14%) Query: 385 EVEVLHDRLLAMLEED----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 EV ++ R+ +L ++ +TP DI ++ + I +V A Sbjct: 566 EVWLIGQRIRELLAKETILDPETKRVRPITPGDIAILSR-----AKRIHSVIAEQFAKLN 620 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA------ARFDITEE 488 LP + + +SLL + D+ + + A+L P++ A+F +++ Sbjct: 621 LPVMVHGVENYFKATEIRVVMSLLKVIDNPYQDVPLAAVLRSPLIQVAPEVAAKFGLSQG 680 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL-------TRMLLGYAMESAQ 541 + ++ + + + WR + E Sbjct: 681 E--NRIGFTEPELAYLKVNSTSKDFFGVVQQNYYAWRDQEVEAVENHDALTEEELAERVA 738 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE--WLPVCRDMLNAFF 599 G+ + +E + LA L R +AQ RPL + W + Sbjct: 739 GDPAGLATKEELGVNCGLIYLKLARFFE-LRDHLRRVAQRRPLVDLIWTIYQATGYLDYV 797 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 + + ++ G + + + D + + Sbjct: 798 GGMSGGPQRQANLHALYERASGYEESGFKGLYQFIHFIEQMQKKNDDLGEATTALAGDAI 857 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGV----------------YPRQLAPLGFDLMSQKP-- 701 N+ T+ + + F +V L+ + + + + P Sbjct: 858 NVMTIHKSKGLQFPIVFLVETTHQFQADRDPVTIEPQAGLGFTYVDSTANETMRVKHPLV 917 Query: 702 ------KRGDRSRRDDDRYLFLEALISAQQKLYIS 730 ++ R R ++ L AL A+Q+L+I+ Sbjct: 918 QQAALKEKKKRQDRAEEMRLLYVALTRAEQRLFIT 952 >UniRef50_Q30VK4 ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30VK4_DESDG Length = 1089 Score = 72.8 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 7/127 (5%) Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 Y + + L + + + + E + R + V I +L + + FK V L + DG+ P Sbjct: 945 YDEYGGWAGLLNWVHLQTELELVRSR--SEKVQIMSLHAAKGLEFKAVFLPALEDGILPF 1002 Query: 688 QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPS 745 A + + + R D +++R L + A+Q L++S R + E S Sbjct: 1003 ASAGVLTGSVDKARMRTDT---EEERRLLYVGMTRAEQALFLSRAARRMLYGKELRLRES 1059 Query: 746 VLVQELI 752 +Q L Sbjct: 1060 RFLQGLP 1066 >UniRef50_C2HA17 UvrD Rep family helicase n=12 Tax=Enterococcus faecium RepID=C2HA17_ENTFC Length = 744 Score = 72.8 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 90/250 (36%), Gaps = 23/250 (9%) Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQ------GEWQSVLPYDESSGLIAELVGH 563 + + + P T++ L ++++ ++ ++ ++Q+ D + L Sbjct: 500 HWQTAQNPQKKNQTYQQLLRQLMVDCYLKKSECDQYFSPKYQNTAITDYILSVRPNLKSK 559 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLP---VCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 A + Q R Q + + + + D E +++I Sbjct: 560 SAE-IRQFEEALRKTDQHQEVYSLVQSYLHLPRIAKEIDQSDQEWIREEVKQHATFRSIQ 618 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 A Q EL RL R + + I ++ + + ++ V L+G Sbjct: 619 ALSQETQATAK--------ELKTRLIAYRQGKL---DALCIQSIHKSKGLSYRNVFLIGC 667 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 N+G P A + S + K + +++R LF A+ A+ +LY+ +++ Sbjct: 668 NEGSLPYNGATEKKVIDSNEIKAEPVTTIEEERRLFYVAMTRARNRLYL--CVPQMKNTR 725 Query: 741 ERFPSVLVQE 750 + S V+E Sbjct: 726 KLKVSRFVKE 735 >UniRef50_UPI0001C41A7D ATP-dependent DNA helicase UvrD/REP family n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41A7D Length = 1565 Score = 72.8 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 74/604 (12%), Positives = 177/604 (29%), Gaps = 107/604 (17%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 + I+++ + E ++ D LD + F V + + E + + + + + + Sbjct: 322 NQIIDISEDFIKSQR-AEGAKQDKALGARDLDRNTYFLVNENSESEAKAIFEMIRYLHDS 380 Query: 400 DPTLTPRDIIVMVADI---DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 +I ++ I ++ IQ D +PY + P + + I+ Sbjct: 381 GKIENYNEIAILSRSIRFSNTAQDLIQ-----LFIDNNIPYHVRGVPDLFDRPEIRSVIT 435 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES--GIRWGIDDDNVREL 514 L+ +FD+ E L+ + ES + + + D+ L Sbjct: 436 LIHHLIED-----------TNPHNHKFDLWELEWLNLKAYTGESFNQVLFNLSDETKNIL 484 Query: 515 EL--PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 ++ + L +S + ++ V DE L+ ++ + Sbjct: 485 NSIQEEFEENVLKEEKRAYLKVTGKKSHKYVFKRVFERDEKV-----LIELFKNIERPIL 539 Query: 573 IWRRGLAQERPLEEWLPVCRDM--LNAFFLPDA---ETEAAMTLIEQQWQAIIAEGLGAQ 627 + ++ L R + L A+F + + + + + + Sbjct: 540 SNENLIRYGVKNKQDLEFFRRLNDLKAYFNSEEYMDSEDTILDIYMKLLTDVCNYLTEDF 599 Query: 628 YGDAVPLSLLRD--ELAQRLDQERI----------------------SQRFLAGPVNICT 663 D + L++ L+ + + + V + T Sbjct: 600 INDPINRDELKNLAILSNTFHNYELIVDNKNLKGAYYFLRYNIAGYSTDNDESEGVQLMT 659 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAP--LGFDLMSQ--KPKRGDRSRRDDDRYL---- 715 + + + F VV LL +N +P Q F + + K D + YL Sbjct: 660 VHKSKGLEFPVVILLSLNHKKFPSQYKDEYDRFYTPNSCLEYKNYDSKEEEIQDYLEEED 719 Query: 716 --FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY--IGQSHYLPGDEALNCDE 771 A+ AQ L + S L++E + + + + Sbjct: 720 RIVYVAMTRAQDILVL---------------SNLIKETPELEGLKAELNDNLSQIEKIEI 764 Query: 772 SEARVKAHL-TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE 830 + K H+ + +++ + +F+ Sbjct: 765 IKDIPKGHIKIHDLINRNLSSCKFLED---DFSQLPKTVCEKPQVKKEDFLN-------- 813 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI-LEGLSRYQINQQLLNALV 889 + +L+ + A P + + + T F L GL + + + + N + Sbjct: 814 -LSFYSLENYVACPFKY--------KLMHDINFSESTMEFNKLRGLFVHNLLETINNRIR 864 Query: 890 EQDD 893 + Sbjct: 865 SNGN 868 >UniRef50_C6MIZ6 TonB box domain protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIZ6_9PROT Length = 923 Score = 72.8 bits (177), Expect = 8e-11, Method: Composition-based stats. Identities = 94/688 (13%), Positives = 200/688 (29%), Gaps = 135/688 (19%) Query: 408 IIVMVADIDSYSPFIQAVFGS----------APADRYL-PYAISDRRARQSHPVLEAFIS 456 + ++V + Y + +F A + + P+ +S A ++P+++ Sbjct: 262 VGIVVPALMKYRNTLIRIFKEVMHPDIRLALPGAKQNIAPFNVSLGLALTNYPLIDIAFV 321 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 L+L D + + L P LA +E + + + ++ IR Sbjct: 322 GLALLDQKVEFNRISYWLRSPFLAG----SENEMSQ--RVLLDAQIR---------RFSE 366 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 P L R+ +L S G ++ H S+L R Sbjct: 367 PEIS-------LERLF--------------ILVSRASGGKECPILLHCLSVLRIFRQTRL 405 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 + + + + F + +++ + Q Sbjct: 406 PQSDSHTVFARIIAEVLQILGFPGERGLDSSEFQTLKKWQMLVANFAALDQVNAKTSYPE 465 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 L Q PV I + + F + ++G++D +P + P F Sbjct: 466 AVSRLRQMAANTLFQPETPNVPVQIIDVFEATGMEFDHLWVMGLSDEQWPLRSHPNPFLP 525 Query: 697 MSQKPKRGDR--SRRDDDRY---LFLEALISAQQKLYISYIGRS-IQDNSERFPSVLVQE 750 + + K S + Y L L SA+ + +SY S +D E S L++ Sbjct: 526 LELQRKAKLPWGSTLESSAYCQRLTRNWLSSAKD-VILSYPRYSNDRDGHELKSSPLIRS 584 Query: 751 LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 + L L+ ++ R+ S E++ Sbjct: 585 IP--------LREAVILDMEQHHERIIQ----------------------SCEMEYIVDC 614 Query: 811 SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRL---QVNFRTEDSEIPDT 867 + Q + ++ + A P RA+ + RL ++ + Sbjct: 615 ESSPLGKEMAKQGIKGGT------SVIKDYAACPFRAWAKHRLSITGLDAPHTGLNAAER 668 Query: 868 EPFILEGLSR-YQ----------INQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 + + L++ +Q I+ L ++E + + + G F +I Sbjct: 669 GLLVHQVLAQLWQQLKTKEALDDISDHNLERMLEGITNSVILQMEQYRPIALSGRFAQIE 728 Query: 917 WETQCQEMQQ-LADRVIACRQPGQSMEID--LACNGVQITGWLPQVQPDGLLRWRPSLLS 973 + + + L + + E + + + L ++ +W Sbjct: 729 QRRLFRLVLEWLVEEKKRSSFRMIAAEEKCLIQIGDLILNARLDRIDELEDGQWIVIDYK 788 Query: 974 VAQGM-----------QLWLEHLVYCASGGNGESRLF-LRKDGEWRFPPLAAE------- 1014 ++ +LV F + K GE F +A E Sbjct: 789 TSRKSIQSMIGERPDEPQLPLYLVMAGMKQQAAGAAFAVIKRGEMGFMAVAREADLLPGI 848 Query: 1015 QALHYL---------SQLIEGYREGMSA 1033 +A L LIE +R+ ++ Sbjct: 849 KAFSQLEKCTRFNTWEDLIEAWRQSLTN 876 >UniRef50_Q0SVV0 Helicase/exonuclease n=12 Tax=Clostridium RepID=Q0SVV0_CLOPS Length = 870 Score = 72.4 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 67/196 (34%), Gaps = 15/196 (7%) Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 + ++ +LN + ++RP E V E + + + + Sbjct: 685 LKAFTAISKKLNELFQIAERKRPYELVACVINGFNIKSMYAGDENKEKLNRLRDLYALFR 744 Query: 621 AEGLGAQYGDAVPLSLLR-DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 ++ L ++R L+ + I R + I T+ + + F V L G Sbjct: 745 DLDDKSKGNRDALLDIIRITGLSNGELESLIINRTKKPRIPIITVHQAKGLEFDTVFLAG 804 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 + + +P +A +L +++ +F A+ A+++L I+Y + + Sbjct: 805 IQNNTFPSYMAIKEGNL-------------AEEKRVFYVAITRAKKRLVITYNSQ-GKYG 850 Query: 740 SERFPSVLVQELIDYI 755 S + + Sbjct: 851 HRNEISQFINYIPKEF 866 >UniRef50_A8L2I8 UvrD/REP helicase n=6 Tax=Actinomycetales RepID=A8L2I8_FRASN Length = 1135 Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 75/216 (34%), Gaps = 20/216 (9%) Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQER-------PLEEWLPVCRDMLNAFFLPDAET 605 +A V L LL + R A EW P Sbjct: 532 VPDELAAPVRRLGRLLRTVRAELRRGAAPEDALWTLWTASEWGPRLERASAVGGPAGRSA 591 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF-LAGPVNICTL 664 + + + + A+ G G V S++ + Q++ E R V + T Sbjct: 592 DRDLDAVVALFDAVGRLGERRGPGFGVS-SVVEELTRQQIAPETAQARAGRPATVRLLTA 650 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAP------LGFDLMSQKPKRGDRSRRD---DDRYL 715 + + ++VV + G+ DGV+P D R R+R + D+R L Sbjct: 651 HRSKGLEWEVVVVCGVQDGVWPDLRQRHTLLGAEQLDSPRNGGVRPPRTREELLADERRL 710 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 F AL A+++L ++ + + D PS + EL Sbjct: 711 FYVALTRARRRLVVTAVDGADDDGE--QPSRFLAEL 744 >UniRef50_B6G1B8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1B8_9CLOT Length = 1256 Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 44/378 (11%), Positives = 111/378 (29%), Gaps = 85/378 (22%) Query: 398 EEDPTLT---PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 +E+ +DI++++ +++ + F + +P ++ Sbjct: 595 KEEKRYRQAKYKDIVILLRATSNWASVLTEEFTNMD----IPVYADTGTGYFDTIEIKTI 650 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 +SLL + D+ +LA+L P+ ++ T E L +R Sbjct: 651 VSLLKVIDNPMQDIPLLAVLKSPI----YNFTPEELIDIR-------------------- 686 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 + ++++ Y + L +L+ + Sbjct: 687 ---------------------IVNRNVSFYEAMKIYASFDDCDN---KKVRDFLERLDDY 722 Query: 575 RRG---LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 + L+ + L W A+ + + + + Sbjct: 723 QERSSYLSTDELL--WYLYNETGYYAYAAILPAGKQRQANLR-ILFERAKQFEDTSFKGI 779 Query: 632 VPLSLLRDELAQRLD--QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM--------- 680 ++L + E + A V I ++ + + F +V GM Sbjct: 780 FNFINFVEKLKKSDSDMGEAKTLSENADVVRIMSIHKSKGLEFPIVICGGMGKRFNKMDM 839 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSR-------------RDDDRYLFLEALISAQQKL 727 N G+ G +++ + + S ++ + A A++KL Sbjct: 840 NRGILYHHELGYGPQVVNLETRLSYPSMMKEAMKKQMVVEMLSEEMRVLYVAFTRAKEKL 899 Query: 728 YISYIGRSIQDNSERFPS 745 I+ ++ N +++ S Sbjct: 900 IITGAVNDVEKNLQKWAS 917 >UniRef50_B0TDI0 ATP-dependent helicase/nuclease subunit A n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=ADDA_HELMI Length = 1396 Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 57/384 (14%), Positives = 107/384 (27%), Gaps = 84/384 (21%) Query: 385 EVEVLHDRLLAML--------EEDPTLTP---RDIIVMVADIDSYSPFIQAVFGSAPADR 433 E + R+ ++ E P RDI++++ + +F Sbjct: 664 EARLAARRIEELMKSAMPVYDREQGGYRPVCYRDIVILMRSTKGRAD----IFLEEFRAA 719 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P + +SLL + D+ + A+L P+ F T E L + Sbjct: 720 AIPAYADTGAGYFEATEVSILLSLLRVIDNPCQDIPLAAVLRSPI----FRFTGEDLARI 775 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R A + T+ + + G A +A+ + + P Sbjct: 776 R----------------------LAEPRKTFFDAIEAFI-GQAEAAARDTFTPIDPVAI- 811 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM--LNAFFLPDAETEAAMTL 611 L L Q++ WR LA+ L + + + Sbjct: 812 ---------RLREFLRQIDAWRT-LARRDSLAKLIATIYRETGFYDYAGAMPGGGQRQAN 861 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS-QRFLAGPVNICTLMPMRSI 670 + + G L + Q D V I ++ + + Sbjct: 862 LRALYDRARQYEATTLRGLFRFLRFIERLQDQGGDLGTARTLGEKEDVVRIMSIHKSKGL 921 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQK-------------------------PKRGD 705 F VV + G+ L L DL+ K +R Sbjct: 922 EFPVVFVAGLGSQF---NLQDLRRDLLIHKNLGLGPVVVDTQLRYRYPTVAKLAIQRRLH 978 Query: 706 RSRRDDDRYLFLEALISAQQKLYI 729 R ++ + AL A++KL + Sbjct: 979 RETLAEEMRILYVALTRAKEKLIL 1002 >UniRef50_Q2SYL0 Superfamily I DNA and RNA helicases n=2 Tax=Burkholderia thailandensis E264 RepID=Q2SYL0_BURTA Length = 920 Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 87/661 (13%), Positives = 173/661 (26%), Gaps = 156/661 (23%) Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVE-------VLHDRLLAML 397 L ++ +N D I SP+ E E L ++ Sbjct: 301 LAREFISHLNHRLPKEMKATHAQSYEDGDIVALGFDSPEEEAEYIAKTCMALRGVVVHES 360 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 + ++ D+ V++ + +P + A A +PY V+ +L Sbjct: 361 SSERGISWSDMAVLLRSVRRDAPAVTA----ALDAVRVPY------------VITGMDNL 404 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 F E+V F Sbjct: 405 -------FQKEEV------EAARQLF-----------------------------YFLAG 422 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG-HLASLLMQLNIWRR 576 + R R LG + A + AE+ + +L Q + Sbjct: 423 EIEMNELRAAWQRADLG-ITKHALEGAIAAAAEARVDMQDAEIGQFKVYNLQRQFIAFME 481 Query: 577 G--LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 L +ER + L F ++ E+ Sbjct: 482 KSELREERVPGGRGEIVFYNLGKFSQAISDFESIH-------------FHSDPVEKYKSF 528 Query: 635 SLLRDELAQRL--DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 + A+ + + + V I T+ + + + VV + + +P + Sbjct: 529 AGFLRFHAENAYPEGWQDNGFVSPDAVRIMTVHQAKGLQWPVVFIPQLVKNRFPAKGGGG 588 Query: 693 G---FDLMSQKPKRGDRSR--RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 L S+ R R DD+R LF A+ AQ+ L++++ + + + S Sbjct: 589 RNAWHLLPSEAFSNAARYRGGADDERRLFYVAVTRAQKYLHMTWAPH-EGNRTAQVASDF 647 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 E++ + VK + TR P Sbjct: 648 YNEVL-------------------ASKYVKRRVQNYATRQQLTP---------------- 672 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 P T+ ++ F+ P + ++ + D Sbjct: 673 --------------APKASVANVTLSFSDVKYFFECPYQF------KLRILYGFNAPLD- 711 Query: 868 EPF--------ILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET 919 E L + + + +++ ++ ER R A DL + Sbjct: 712 EALGYGKSLHDALAEVHARALRGETIDSREAEELIERHLRAPYAYPDLKDK-LKSAAVKV 770 Query: 920 QCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ 979 +++ A +++EI L +GV + G + V+ L Q Sbjct: 771 VAAYIRKNAAEFNNLEFSEKAIEIAL-GDGVSVAGRIDLVRRMDTDEVTIVDLKSNDRAQ 829 Query: 980 L 980 Sbjct: 830 A 830 >UniRef50_Q1W555 UvrD/REP family helicase n=1 Tax=Pseudomonas aeruginosa RepID=Q1W555_PSEAE Length = 760 Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 54/422 (12%), Positives = 116/422 (27%), Gaps = 83/422 (19%) Query: 387 EVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 E + +RL L +DI V+V D + R +PY + R Sbjct: 335 EHVAERLT------SGLKLQDIAVLVRTYD-----LSVTLELDLHQRGIPYHVYGRPPLM 383 Query: 447 SHPVLEAFISLLSLPDSRF---VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 P + A + +L L R+ + + ++ + + + + + + V Sbjct: 384 RIPEISALLGVLQLASGRWKTLDANQLRYVIKSLMYRPTLYLDKAAINRVVELVVR---- 439 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 P R +T Y + + ++ +++ Sbjct: 440 ------------QPECLVEAIRSTITLQTKDYQANQIRDRADLLEILATATDPQDKVLTV 487 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 L L+ + R + ++ P + + AF L + E ++ +I Sbjct: 488 LDRYLLA-TEFERNIEKQSPTADQAAAVMANVQAFRLIASRHEGSIDAFLDSIDPLIDSS 546 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 V I ++ + + V + G+ Sbjct: 547 AME--------------------------PPTTPHVWISSIHRAKGAQWSRVFVPGVVRS 580 Query: 684 VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF 743 +PR DL + + + +R LF A+ A +++I++ S Sbjct: 581 GFPR------DDLSADE--------IEAERRLFYVAITRAVDEVFIAHPNDLEFQRSLER 626 Query: 744 P------------SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 P S + E+ + + +E E PF Sbjct: 627 PDITETHPETSSVSRFLWEMDIALARHAGAAVEEGRFAALGEVDRPEVANTYFATFPFSK 686 Query: 792 QN 793 Sbjct: 687 DW 688 >UniRef50_D2QY09 UvrD/REP helicase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QY09_9PLAN Length = 696 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 78/231 (33%), Gaps = 38/231 (16%) Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLAS-LLMQLNIWRRGLAQERPLEEWLPVCR 592 G++++ + + + E + A LL + A++R + L R Sbjct: 479 GFSLKKLGIDVRGRSHILRINYRTTEQIRRFADGLLATTSNDFDDGAEDRRSQSLLNGPR 538 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL------RDELAQRLD 646 + F + Q + ++ + +++ + L Sbjct: 539 PTIREF----PNEAEQAKFVLDQVRLLLEQ-----GMSPREIAVFARSSSRLQSIRDILT 589 Query: 647 QERISQRFLAG--------PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 ++ L +N+ T+ + + FKVV ++ N GV P F L Sbjct: 590 DAKMEIAPLNDEEDLSEVRGINLGTMHRAKGLEFKVVFVIDCNQGVVPHA-----FTLSK 644 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 + + + + +R L A+ A+ +++++ +G+ PS + Sbjct: 645 MRDQGDYDAAYERERQLLYVAITRARDEVFVTSVGK---------PSEFLT 686 >UniRef50_A6DAL9 Putative uncharacterized protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DAL9_9PROT Length = 734 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 64/481 (13%), Positives = 145/481 (30%), Gaps = 83/481 (17%) Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF--FLPDAETEAAMTLIEQQWQAII 620 ++ ++L + + + +D+ F + E + + + II Sbjct: 293 RKSNFFIKLKALFEYVTTKDKVAY--EKIKDIYEEFEKLNSNKEILEFLKNLLSNKEKII 350 Query: 621 AEGLGAQYGDAVPL-----SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 + + +P L +R G V ++ R + F V Sbjct: 351 VDEEFYKIEKLLPYIQEDKEKFLHFLIERFKNLSFDDV-DGGKVTAMGVLEARGLNFDGV 409 Query: 676 CLLGMNDGVYPRQLAPLGF--DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 ++ N+GV P F + + +K R ++ + + L +K+ I+Y+ Sbjct: 410 IVVDFNEGVVPNISDTDYFLNNSIRKKTSLPTREDKESLQKNYYYNLFLNSKKIKIAYVK 469 Query: 734 RSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 N E PS + EL LN E+ F Sbjct: 470 -----NEENNPSRFLYEL--------------GLNEGEN-----RDFYYSEVLYRFS--- 502 Query: 794 YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRL 853 +P +R SY + + +L R +F+ L Sbjct: 503 -KPKKRFSYDGIEFEV--------------------KNLTPTSLYDLLECKRRYYFKYIL 541 Query: 854 QVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD--DAERLFRRFRAAGDLPYGA 911 Q+ +EI + + F I + ++++ ++ F + L Sbjct: 542 QIK-----NEIEEKDNF-------GTIFHNSIEKVIKEGFNSSDEYFDKL-MREILKEKD 588 Query: 912 FGEI--FWETQCQEMQQLAD----RVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLL 965 EI ++++ + R + + E + ++ + + Sbjct: 589 KKEIFEIRSKWEDKIKKFCEIDFNRARNYKNVEKFAEYGKKLGDFILNARFDRIDEEFVY 648 Query: 966 RWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDG-EWRFPPLAAEQALHYLSQLI 1024 ++ + L+ L Y ++++D E + L+ ++A L +L+ Sbjct: 649 DYKTGS-KENNIDKDTLQRLFYNYIFEKPAIFYYIKEDNIEDKENNLSPQEAKKELEKLL 707 Query: 1025 E 1025 E Sbjct: 708 E 708 >UniRef50_Q65LJ9 ATP-dependent helicase/nuclease subunit A n=3 Tax=Bacillus RepID=ADDA_BACLD Length = 1230 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 46/386 (11%), Positives = 105/386 (27%), Gaps = 85/386 (22%) Query: 385 EVEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 E + ++ ++ E + RDI+V++ + ++P I F + Sbjct: 549 EARAMAGQIRRLITEKFQVYDAKAKASRNIQYRDIVVLLRSM-PWAPQIMDEFKQ----Q 603 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P + + +SLL + D+ + + ++L PV+ + E L + Sbjct: 604 GIPVYANLSTGYFEATEVSVTLSLLKIIDNAYQDIPLASVLRSPVV----GLDENELSLI 659 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R + ++++ Y + Sbjct: 660 R-----------------------------------------IKDKKAPFYEAMKAYLAA 678 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 + L L L WR E + RD ++ Sbjct: 679 ADGDERLSEKLRRFDGLLKKWRAYAKNHSVAELIWEIYRDTKYLDYVGGMPGGKQRQANL 738 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI--SQRFLAGPVNICTLMPMRSIP 671 + + + + +R D + V + T+ + + Sbjct: 739 RALYDRARSYEATSFRGLFRFLRFIERMQERGDDLGTARALSEQEDVVRLMTIHSSKGLE 798 Query: 672 FKVVCLLGMNDG----------------------VYPRQLAPLGFDLMSQKPKRGDRSRR 709 F VV G+ ++P+ + K+ R Sbjct: 799 FPVVFTAGLGRNFNMMDLNKSYLLDKELGFGTKFIHPKWRISYPTLPLIAMKKKLRRELL 858 Query: 710 DDDRYLFLEALISAQQKLYISYIGRS 735 ++ + AL A++KLY+ + Sbjct: 859 SEELRVLYVALTRAKEKLYLVGTAKD 884 >UniRef50_Q28JY0 Putative uncharacterized protein n=1 Tax=Jannaschia sp. CCS1 RepID=Q28JY0_JANSC Length = 986 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 105/711 (14%), Positives = 216/711 (30%), Gaps = 132/711 (18%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 +T SPQ E + R+ + + + ++ D + V R Sbjct: 323 VTLLEAPSPQMEATAIALRMRKGVADGQR-----VALVTPD----RRLARKVTAQLDRWR 373 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV----------LAARF 483 LP + + Q+ P + + +E ++ALL P+ L Sbjct: 374 ILPDDSAGQVLAQTAP-GRFLRQVAEMLCGPVTAEAMVALLKNPLCNSGPDRGNHLRRTV 432 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 D+ L+ LR+ + +D R+ ++ T TW A + Sbjct: 433 DL---ELQLLRKGLTFPTRAALMDWAAARKDDVDTTAWVTW----------LADHLLEPV 479 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 + LP E L LA+ + Q L ++ P E+ + R++ + D Sbjct: 480 ETAALPLAERVALHKSRADALAAGVDQ--TTTHELYKQEPGEKAETLLREL---QAVADT 534 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 + + A+ + + R + R A V I Sbjct: 535 GGAMSARDYADFFTALAHD-----------------------REVRFALRPHAD-VLIWG 570 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA---- 719 R V L G+N+G +P+ + + +P R D R DR + L A Sbjct: 571 TQEARVQGADVTILAGLNEGTWPQAASADPWL---NRPLRADAGLRLPDRVIGLSAHDFQ 627 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 A ++++S R + ++ P+ + L++ +G + + Sbjct: 628 QGIAGGEVWLSRAKRDDETDTV--PARWLNRLVNLLGGASDASSQALTD----------- 674 Query: 780 LTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQR 839 + + S + + + + L + + ++R Sbjct: 675 ------MQARGAEWLTLADTLS-TPDARETPAPRPAPAPQNITRLTA-----LSVTDIER 722 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFR 899 P + L + PD L G ++I +Q + A + Sbjct: 723 LIRDPYAIYAARMLNLRALDPLRASPDA---RLRGTVFHRIMEQFITATPTDLPEDAGQV 779 Query: 900 RFRAAGDL-----PYGAFGEIFWETQCQEMQQLADR---VIACRQPG---QSMEIDLACN 948 AGD+ P+ A ++ + + A +P + + + Sbjct: 780 FMGLAGDILAQDAPWPAARHLWRHRLQTILPWYLAQEASFRALAEPWVLEERKDWHVPGL 839 Query: 949 GVQITGWLPQVQ--PDGLL---RWRPSLLSVAQGMQLWLEHLVYCAS----GGNGESRLF 999 G+ ++G ++ PDG + ++ L + + + L+ A G + L Sbjct: 840 GMTLSGIADRIDSLPDGRVAIYDYKTGNLPTDRMEIAYNKQLLLLALMGRGGAFADRPLD 899 Query: 1000 LRKDGEWRFPPLAAEQALHY-----------LSQLIEGYREGMSAPLLVLP 1039 + + +A + L +LI Y PL+ P Sbjct: 900 VARLAYVGLGTKPEIRAQDFDDGLLDETFKGLRELITHY----RQPLVGFP 946 >UniRef50_C6PW58 ATP-dependent nuclease subunit B-like protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PW58_9CLOT Length = 1001 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 55/420 (13%), Positives = 109/420 (25%), Gaps = 57/420 (13%) Query: 565 ASLLMQLNI-WRRGLAQERPLEEWLPVCRDMLN----------------AFFLPDAETEA 607 + L+ ++ EEW + + D Sbjct: 357 SELIRKMVKGLLEYEKDSCSGEEWFEILCQQMESKKDYMAGLIYKVFNSNIDNDDKFEIM 416 Query: 608 AMTLIEQQWQAIIAEGLGAQ-YGDAVPLSLLRDELAQRLDQERISQRFLAG-PVNICTLM 665 A + + ++ + L+ + + + V I Sbjct: 417 AFEGFKNLIYELKLSFEKSEILNKDILKEDFVQLLSDCIQGITFTVKKGNNEGVRILNTA 476 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLG-FDLMSQKPKRGDRSRRDD-------DRYLFL 717 + + FK V +LG+N+G P+ + G FD + R D ++ F Sbjct: 477 LAKGVYFKHVYILGLNEGELPKCVKNNGLFDSFETSMLCENGIRYKDYLWELNREKIRFN 536 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY--IGQSHYLPGDEALNCDESEAR 775 ++ SA++ L +SY D S + E+ I + + L E Sbjct: 537 LSIASAEETLNLSYRSAGE-DGKFAIASSFIDEIKFMCRIDKINNLTMRNRFEIKYDEVM 595 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE----- 830 L ++ R F + E S+ + + K + + E Sbjct: 596 SSYELQAVYLRSYFQSKYL-NNETDSFKKNLSLMEKEVNKIIDKGLVEYHREKEEAFNEY 654 Query: 831 ----------------TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP--FIL 872 +L + P R + E+ E E F Sbjct: 655 EGILGNDFKDISETLCRFSPSSLNEYLKCPFRYMMNTLFNLGEEEEEEEFSSLEIGSFYH 714 Query: 873 EGLSRYQINQQLLNALVEQDDAERLFRRF--RAAGDLPYGAFGEIFWETQCQEMQQLADR 930 L RY Q E+ + D+P + + + ++ Sbjct: 715 SVLYRYYSKAQQFQCFDEEVFEAVFKKSLGELRKIDIPKEEL-NLIFNYLYRVLKNFITA 773 Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 62/167 (37%), Gaps = 21/167 (12%) Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 D++ +++S E F V D L+++++D EL ++ G ++ Sbjct: 238 DFLE--EEIKSPFEKMGFEIVGEDGELYDVKNDFKELGSKFYCGESLTCNVE-------- 287 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + + E+ + L + P DI + + + + YSP+I +F Sbjct: 288 ----GLNIKAYPCIKTEIRETARDIKEKLMA--KINPEDIAIYINNREDYSPYIIEIF-- 339 Query: 429 APADRYLPYAISDRRARQSHPVLE-AFISLLSLPDSRFVSEDVLALL 474 + +P A++ A S ++ LL E+ +L Sbjct: 340 --DEFNIPVALNYEIALSSSELIRKMVKGLLEYEKDSCSGEEWFEIL 384 >UniRef50_Q897M0 ATP-dependent nuclease subunit A n=1 Tax=Clostridium tetani RepID=Q897M0_CLOTE Length = 1147 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 103/360 (28%), Gaps = 68/360 (18%) Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 +E + RDI++++ + + VF + +P ++ +S+ Sbjct: 485 KEYRKVQYRDIVILMRATSA----MANVFTEELNNVGIPVFADTSSGYFETIEIKTIMSI 540 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L + D+ +L++L P+ F + E + +R Sbjct: 541 LQIVDNPRQDIPMLSVLRCPI----FSFSPEDIIDIR----------------------L 574 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 + L ++ + + DE + EL + S L +LN+WR Sbjct: 575 INRDISIYECLEKI-----KNKEPCLEEEKVYIDEINE---ELKERIISFLEKLNLWRDN 626 Query: 578 LAQERPLEE--WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 + +++ W + + ++ + Y Sbjct: 627 -SIHMSIDQFIWYLYTETGYYGYVGAMPGGVQRQANLRLLFER-AKQYENTSYKGFFNFI 684 Query: 636 LLRDELAQRLDQERISQRFLAGP--VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 ++L ++ V I ++ + + F VV + G G + Q Sbjct: 685 SFINKLRNTSGDMGSAKILGENENVVKIMSIHKSKGLEFPVVIMAGTGRG-FNLQDIRKD 743 Query: 694 F-------------DLMSQKPKRG----------DRSRRDDDRYLFLEALISAQQKLYIS 730 DL + ++ + A A++KL I+ Sbjct: 744 ILFHHQLGFGPEYVDLDKKIKYPTIMKKIIAQKIKLETFSEEMRILYVAFTRAKEKLIIT 803 >UniRef50_C5BPK5 Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BPK5_TERTT Length = 909 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 85/530 (16%), Positives = 148/530 (27%), Gaps = 106/530 (20%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 ++ PQ E+E + + P + I V++ D+ + ++ F Sbjct: 232 VSLCSFSDPQAELESVATWCYQAIAAQP---VQQIGVVIPDLSARRAEVERHFNRVFDPH 288 Query: 434 YL--------P-YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 + P + +S + PV++A + L L +R E ALL P L + + Sbjct: 289 GILPTTPQHAPGFNMSAGQPLAQVPVMQAALQALQLNRARLELETASALLLSPFLGIQSE 348 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 + L +D + G S Q Sbjct: 349 LAARAL---------------LDVRLREQ--------------------GELSPSRQLLR 373 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA-QERPLEEWLPVCRDMLNAFFLPDA 603 S + + GL L H L + + R EWLPV L P Sbjct: 374 TSAAEFCDDEGL--PLCEHWYHALDDFDKLAKQYGPSARLPSEWLPVFMAQLQCLGWPGD 431 Query: 604 ETEAAMTLIE-QQWQAIIAEGLGAQY-GDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 T + + Q WQ + E + S L + L Q + PV I Sbjct: 432 RTLDTLEYQQVQVWQTCLDEFAALDVVTAPMAWSEALSLLRRLLQQRSFQPQTRISPVQI 491 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 + +PF + ++G++D +P +P ++ + + + + L Sbjct: 492 LGSLEAAGLPFDQLWVMGLDDEAWPPAPSPNPLLPLAVQVAHNTPQSSAEREFRYARNLT 551 Query: 722 -----SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 SA Q + SY +D+ + PS LVQ Sbjct: 552 QRWLASASQ-VTFSYAA--TRDDKQLQPSPLVQ-------------------AFAQTREA 589 Query: 777 KAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLET 836 T + + A G A Q Sbjct: 590 VPLFTAWEQLQWQSRE--MESIEDTNAGGVAEVQRIRGGAAILRDQAA------------ 635 Query: 837 LQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN 886 P +AF + RL+ + E L+ R + + Sbjct: 636 ------CPFQAFARHRLRASEVPEVV-------LGLDAAERGNLLHHAME 672 >UniRef50_B8I7B7 UvrD/REP helicase n=2 Tax=Clostridium RepID=B8I7B7_CLOCE Length = 708 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 33/280 (11%), Positives = 93/280 (33%), Gaps = 27/280 (9%) Query: 483 FDITEEGLRYLRQWVNE---SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM-- 537 F I + L + R W+ + + + + +D + + + +++ +L A+ Sbjct: 389 FRIRQNRLFFFRHWLVQEVCAFLMFSLDGYDTESFTKICFRMNRF---ISKTMLECALQG 445 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 E ++ + + L L E++ L + Sbjct: 446 EERDNVIDRIINNHDLKPFQLTAMRDLKGEFASLAK-----KNPWSALEYIKNDFRYLES 500 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 + + + + + I G+ + EL + + + + Sbjct: 501 VKEYSSISGQSFDYFNRLFG--ILHGISVDCPTISAFLVRLQELEKIFEAGGVQNDWEKN 558 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 + + TL + + + V ++ M + P G ++ K +++R LF Sbjct: 559 QITLSTLHSSKGLEYDSVFMIDMINSEIP------GDKVLENSEKI----TLEEERRLFY 608 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 + A++ LY+ ++ + PS+ + E++ + + Sbjct: 609 VGMTRAKKDLYLLNPC--TLNDEKFMPSIFINEVVQLLQK 646 >UniRef50_C0B669 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B669_9FIRM Length = 480 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 14/125 (11%) Query: 646 DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 + Q V++ TL + + F V ++GMN G+ P + + Sbjct: 295 AADTERQTEEEDAVHLMTLHASKGLEFDYVFIIGMNQGLIPLRCKSI------------- 341 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE 765 + +++R LF L A++ L +SY + PS ++ L + + PG E Sbjct: 342 -EQEEEERRLFFVGLTRARKNLELSYYTNPTIPGTYETPSNYLRMLPEELLDWEEKPGSE 400 Query: 766 ALNCD 770 + + Sbjct: 401 SRKAN 405 >UniRef50_Q2J6F0 UvrD/REP helicase n=37 Tax=root RepID=Q2J6F0_FRASC Length = 736 Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 16/174 (9%) Query: 566 SLLMQLNIWRRGLAQERP--LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 ++ + + R + E D+L A + +QW+ + A Sbjct: 401 EVVAAMRLLRAAVRSADTDRPEGLTAAVADILAALGWRADQPTVGSGAEREQWENLAALH 460 Query: 624 LGAQYGDAVPLSLLRDELAQRL-DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 A A + L D+ + V + TL + + + V L+G+ + Sbjct: 461 RLAGDLAARSPEADLEAFVAELGDRATHEHQPTVQGVTLSTLHTAKGLEWDAVFLVGLTE 520 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 G P A + ++R L + A++ L +S+ Sbjct: 521 GTLPLVHARTA-------------EQIAEERRLLYVGVTRARRHLVLSWALSRA 561 >UniRef50_B5CQ86 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQ86_9FIRM Length = 1256 Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 49/384 (12%), Positives = 112/384 (29%), Gaps = 57/384 (14%) Query: 384 REVEVLHDRLLAMLEED----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 E ++ R+ M+ + +DI+++ I ++ F + A+ Sbjct: 538 AEARMIARRIREMMGSGYIYDKGSDSFRKIQYKDIVILTRSIQGWA----ESFSAVLAEE 593 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P R + + L + D+ + A+L P + + E L Sbjct: 594 GIPAYSVSREGYFETYEISVLLDYLRILDNARQDLPLTAVLTSPFV----GLDAEEL--- 646 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + IR + E + T G E + + + S Sbjct: 647 ------AQIRLAYPNLPFYESVWLCGEEKTEETGADGSGETGEKEKKEKKKSDAEAENRS 700 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMTL 611 + + LA Q+ +R L+ P+ + L F E + Sbjct: 701 GEISEAVREKLAEFTRQVRYFRSILSYT-PIHDLLAKILEETGYRTFIAAMPGGEQRIAN 759 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPVNICTLMPMRS 669 +E + A G Y ++L + + A V + ++ + Sbjct: 760 VEMLIEKACA-FEGTSYKGLFNFVRYIEQLKKYNVDYGEAGIMDEQADTVRLMSIHKSKG 818 Query: 670 IPFKVVCLLGMNDGVYPRQLAPL----------GFDLMSQKPKRGDR------------- 706 + F +V + GM + Q G D + + + + Sbjct: 819 LEFPIVFVAGMG-KSFNMQDQRGSIVIHPDWGIGIDAVDLEQRTKNPTFLKRMIQEKTKL 877 Query: 707 SRRDDDRYLFLEALISAQQKLYIS 730 ++ + + A++K+ ++ Sbjct: 878 ENLSEELRVLYVGMTRAKEKMILT 901 >UniRef50_C7R1R1 UvrD/REP helicase n=2 Tax=Micrococcineae RepID=C7R1R1_JONDD Length = 690 Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 55/151 (36%), Gaps = 19/151 (12%) Query: 604 ETEAAMTLIEQQWQAI--IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 + + +W+A+ + L+ + E+ +R R V + Sbjct: 447 DPPQTRGAVRDRWEALDALRRLCHELVSQGNDLAQVVAEIQER---ARHHHAPTVDSVTL 503 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 +L + + + +V L GM++G+ P LA + ++R L + Sbjct: 504 ASLHAAKGLEWPIVHLAGMSEGLMPISLAAT-------------PTAIAEERRLLYVGMT 550 Query: 722 SAQQKLYISYI-GRSIQDNSERFPSVLVQEL 751 AQ+ L +SY RS S R S + L Sbjct: 551 RAQELLTLSYSQSRSGTSRSVRQVSRFLAPL 581 >UniRef50_Q1YTF1 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTF1_9GAMM Length = 923 Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 110/791 (13%), Positives = 230/791 (29%), Gaps = 151/791 (19%) Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-----------GE 292 RYYW L + + + + L + + N E Sbjct: 89 SRYYWERAIADDGLEQPVNFVKLAGDTLKALENWNLRADQVPGENPSVEYFKRWSGRFDE 148 Query: 293 QDVGNPLLA---SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA 349 N LL SW +G+ + S L E+ + + L + + + Sbjct: 149 LLRRNKLLTIQRSWQLVGQGFD--CSALNREAEIMVYGFQSTPPLQAAL------IATAS 200 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 +E + S ++ D SPQ E+ + L+ +P I Sbjct: 201 SQVTRLESVNSSTEVVRIEAED---------SPQ-ELRLAASWAAQQLKINPEQR---IG 247 Query: 410 VMVADIDSYSPFIQAVFGSA------------PADRYLPYAISDRRARQSHPVLEAFISL 457 ++V +++S + V A P + IS A + P++ + + + Sbjct: 248 IVVPELNSSLQRVARVVNEALNTVDNNTSLENPDGVKVIANISAGTALRDTPMVHSALLM 307 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 + L + + L LL P A + L + E+ Sbjct: 308 IGLLKDKRPLSEWLHLLYSPYSAF------DQLPL----------------SFRADSEIQ 345 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 ++ + F L++ + A+ L ++ ++ + L + RR Sbjct: 346 LRKRNRFDFSLSQFI--TAVTPKHKSNDDGLDNKDNQLDESDALNPLRHMRD---YERRQ 400 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT-LIEQQWQAIIAEGLGAQ-YGDAVPLS 635 + ++ W L P T ++ Q W ++ + G G V LS Sbjct: 401 INSQQSFAAWGEFFVGYLTDLGWPGKRTANSIEYQQRQHWNRLLEQFTGLDNLGIEVGLS 460 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 L Q + P+ I L+ + F + ++ M+ +P +A Sbjct: 461 TAFKHLQQLAQDSVFHPQTADAPLQILGLLEGSGLRFDQLWIVDMHSQNFPASVAINQL- 519 Query: 696 LMSQKPKRG-----DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 L ++ + R + L++ + +L +S+ I+ + PS L+ + Sbjct: 520 LPAEFQRLHQMPHSLPERELEIANQLLQSYKNNSGRLIVSHPK--IRGEEQLDPSPLISD 577 Query: 751 LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 + +V + P P YQ + Q A + A Sbjct: 578 I------------------PLGSHKVLNSHKLFDSPQPHPPWLYQDYQCQLLADQ----A 615 Query: 811 SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 +++ P AF RL+ E S+ Sbjct: 616 PPYSPRLETIRGGSNLLKNQSI----------CPFNAFVTHRLKAEPLEEPSQ------- 658 Query: 871 ILEGLSRYQINQQLL---------------NALVEQDDAERLFRRFRAAGDLPYGAF--G 913 L L R + ++L + + P G Sbjct: 659 GLSALDRGSLLHEILFRLWGIWKTSATLQALSDQQLQQQLATTIEQTLTEWAPRHPILRG 718 Query: 914 EIFWETQCQEMQQLADRVIACRQPGQSMEI-------DLACNGVQITGWLPQVQPDG--- 963 + F + Q +++L + + + E+ + ++I L +V G Sbjct: 719 DRFRGLEQQRLEKLLTQWLEEEKLRPPFEVVELESKNSVRFGDLEINLRLDRVDQIGDKL 778 Query: 964 -LLRWRPSLLS 973 ++ ++ + Sbjct: 779 LIIDYKSGAVK 789 >UniRef50_C4G2E3 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2E3_ABIDE Length = 618 Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 41/362 (11%), Positives = 102/362 (28%), Gaps = 85/362 (23%) Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPADRYLPYAISDRRA-RQSHPVLEAFISL 457 + + ++ ++ Y I A + +P+ + + +H + + + Sbjct: 332 EAGIPFSEMAIV------YRTNIAARPVVVKLIEYNIPFIMKEMAPSIYNHFIAKNIMDY 385 Query: 458 LSLPDSRFVSEDVL-------ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 L + + L L LA + ++ + Y+ I+W Sbjct: 386 LEIANGDRARSRFLNIMNRPNRYLTRESLADAVVLNKDKVEYVSF------IKWTAAYKG 439 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 + A +T +F L ++ + ++ + G Sbjct: 440 RNWM---AERINTLQFHLAKLA-------ELSPFGAIHYIRKVIGYD------------- 476 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 + A ER ++ E + Sbjct: 477 --KFLTDYADERHIDA----------DELFEILEEIEEAAKPFNTLKEWKESIEDFNKKQ 524 Query: 631 AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 ++ V I T+ + + F+ V + + +G+ P + A Sbjct: 525 KEEFE--------------KNKNTDRDAVVISTMHGCKGLEFEKVYIPEVVEGIIPYKKA 570 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 D+ +++R LF A+ A+++L I+Y ++ S ++E Sbjct: 571 IRQSDI-------------EEERRLFYVAITRAKKELMITYPKN--LYGKDKEVSPFLRE 615 Query: 751 LI 752 + Sbjct: 616 YL 617 >UniRef50_B7GQ33 UvrD/REP helicase n=2 Tax=Bifidobacterium longum subsp. infantis RepID=B7GQ33_BIFLI Length = 1371 Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 55/398 (13%), Positives = 111/398 (27%), Gaps = 92/398 (23%) Query: 385 EVEVLHDRLLAMLEE-----DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 E++V D ++ ++E + DI V+ ++ +P + Sbjct: 613 ELQV--DMIVRRVQELCEGPRAQYSYGDIAVLARGATHFADL-----ADRLYRVGIPVEV 665 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 P ++ + L + +R ++A+L T++ L +R ++ Sbjct: 666 QGVGDLYRQPEIQIALDWLRIIANRHQDVPLVAVLRT------MGFTDDDLARIR--LHN 717 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 G W D A + + +VL D Sbjct: 718 RG--WLFDVMRR-----------------------IAESGGEADESAVLSSDV------- 745 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEE--WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 L+ +++ L ++ A+ L + W L F E E + Sbjct: 746 LLAKISAFL-RIYDAACDYARVHSLSDSLWHLYAVSGLFDFAGNMPEGERRQANLR-LLV 803 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 AQ P + E S V+I T+ + + + VV L Sbjct: 804 EKADAFAVAQERGLQPFLDAVTMWSASGSGEEASTVPTKNAVHIMTIHKSKGLQWPVVIL 863 Query: 678 LGMN------------------------------DGVYPRQLAPLGFDLMSQKPKRGDRS 707 +G + +G + + + D Sbjct: 864 MGASNNLLTGSRTAVVRTIAHQTRNEDGAVAEYGEGALSLVDQRNHVRVDTFQRAVIDSR 923 Query: 708 RRD----DDRYLFLEALISAQQKLYI--SYIGRSIQDN 739 ++ ++ L A+ A++KL I SY D Sbjct: 924 AKELEAAEELRLLYVAMTRAERKLIIAGSYRPGKNDDG 961 >UniRef50_Q04GY7 ATP-dependent helicase/nuclease subunit A n=1 Tax=Oenococcus oeni PSU-1 RepID=ADDA_OENOB Length = 1186 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 52/393 (13%), Positives = 123/393 (31%), Gaps = 89/393 (22%) Query: 381 SPQREVEVLHDRLLAMLEEDP----------TLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 S Q ++E++ ++ A++ + L RDI ++ S+ IQ +F Sbjct: 524 SRQAQIEIIAAKIQALVGQSEIYDRQSGKMRPLVYRDITILERS-HSWENDIQTIFKKY- 581 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 ++P ++ Q + +S L + D+ ++A+L P+ + + E L Sbjct: 582 ---HIPINVAAGNFLQEFE-VSIVLSFLKIIDNPHQDIPLVAVLRSPI----YGLDENQL 633 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 +R + ++ S L Sbjct: 634 AEIR------------------------------------------TADMKHDYFSALQA 651 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN--AFFLPDAETEAA 608 +G +L +A+ L+QL +R +A + + + + + N + Sbjct: 652 YAKTGQDLDLQKKMAAFLVQLENYRE-IAADNQIVDLIWQIYNDTNWPEYVAGMVGGSQR 710 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ-ERISQRFLAGPVNICTLMPM 667 + + + ++L ++ + V++ T+ Sbjct: 711 QANLH-ALYQYAQQLSDNHFVGLFSFIRYVEQLMDSVEDFAQAPVDMGQEAVSVMTIHAA 769 Query: 668 RSIPFKVVCLLGMN----------------------DGVYPRQLAPLGFDLMSQKPKRGD 705 + + F +V LL ++ D V+P + ++ Sbjct: 770 KGLEFPIVFLLNLDKQIDNRDSNGAMVVDFDNGIGIDFVHPTSQVKIPTIQKIAVAEKIK 829 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 ++ L AL A+Q+LY+ + + D Sbjct: 830 EKNWAEEMRLLYVALTRAEQRLYLVGSSKRMSD 862 >UniRef50_Q2LTE2 UvrD/rep helicase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTE2_SYNAS Length = 657 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 58/420 (13%), Positives = 119/420 (28%), Gaps = 81/420 (19%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 +IL L N ++ N E + + + + ++ E + R+L + + Sbjct: 291 PEILHLANLSIE--NNENQFAKSLRAVREAGLRPV-VVPARNALQQAEFVAQRILELHRD 347 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 L ++ ++ + F R +PY I ++ + L Sbjct: 348 GIPL--HEMAILYR-----AHFHAMDVQMELTRRGIPYEIRSGIRFFEQAHIKDVTAYLR 400 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + + + + I ++ L Q+++ESG Sbjct: 401 ILGNPLDELAWKRIFGLCP-----KIGKKTAEKLWQFLSESG------------------ 437 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 L L ++A+ G LA L R Sbjct: 438 --EPLEAALREDFLKVVSKTAR--------------------GGLAFFQEVLIKLREEAV 475 Query: 580 QERPLEEWLPVC-----RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 L + + + R L + A E + + + G + D + Sbjct: 476 HASTLPDLISLIIERGYRKYLRETYTDTASREEDLEQLAE------FSGKFSSLEDFLSE 529 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 L + + V + T+ + + + VV L+G +G+ P + A Sbjct: 530 LSLMTNMDADGRDKAAGDDLQENKVILSTVHQAKGLEWSVVLLVGCAEGMIPLERAVQEA 589 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD--NSE-RFPSVLVQEL 751 ++ + LF A A+ LY+ Y PS ++EL Sbjct: 590 GGEEEERR------------LFYVAATRAKDYLYLCYPQTDYSRWAGFANLSPSRFIREL 637 >UniRef50_B5YI00 ATP-dependent DNA helicase PcrA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YI00_THEYD Length = 554 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 73/236 (30%), Gaps = 49/236 (20%) Query: 550 YDESSGLIAELVGHLASLL------MQLNIWRRGLAQE--------RPLEEWLPVCRDML 595 + E+ G E ++ QL I + LA+ R E W+ L Sbjct: 313 FTETYGNREETQCTFSNFAVLARTNRQLKIIKDFLAKAGIPVKTIRRDTETWIASIVKKL 372 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE--------------- 640 ++ + I + + + + +S+L++ Sbjct: 373 TELISGGYTSKKILKDIR--LSEFLESSGILEGLNDLEVSMLKNISKSYDTGKLLEQIHA 430 Query: 641 LAQRLDQERISQRFLAG--PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 L F V++ T + + F VV + G +G+ P L+ +DL Sbjct: 431 FIDELSGLTSFDLFPENLNAVSLLTFHASKGLEFPVVFITGFEEGLVPYTLSSD-YDL-- 487 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELI 752 +++R LF + A L I + + + S ++E+ Sbjct: 488 -----------EEERRLFYVGMTRAMNDLIIIHAKNRLINGKKLSLPISSFIKEIP 532 >UniRef50_A7BEI5 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BEI5_9ACTO Length = 1078 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 80/616 (12%), Positives = 162/616 (26%), Gaps = 90/616 (14%) Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR-ARQSHPVLE 452 L + D +V+V + A +P A R + P Sbjct: 389 LRSHHLHDGIDFSDQVVIVRSSSMVAET-----SRYLARGGVPVAGGGRAFDFATQPTTR 443 Query: 453 AFISLLSLPDSRF------VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 + L+++P E LL P++ A + + + Sbjct: 444 LLLDLVTMPTGTSDTDVAQRRELAERLLPSPLVRA-------DALAIHRLLRRLNAARAQ 496 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 + P + + Q + +++ G A LA Sbjct: 497 AAEEAGGESAPIP-----------LTAADLVSDPQTWRPFIEQAEQAGGKRARAATMLAR 545 Query: 567 LLMQLNIWRR-GLAQERPLEEWLPVC-------RDMLNAFFLPDAETEAAMTLIEQQWQA 618 L G++ +E L + + D + ++ Sbjct: 546 PLETAARLWELGMSGSVRPQERLWSLWEASGVAGEWRSRAIASDDSSGWYDDQLDAVVAL 605 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERI--SQRFLAGPVNICTLMPMRSIPFKVVC 676 + + Q A EL G V + T ++VV Sbjct: 606 LRVADVWEQRNPAGSAVGFASELLAGSVPIDTISRVGVRPGGVEVLTPAQAMGRHWQVVV 665 Query: 677 LLGMNDGVYPRQLAPLGF---DLMS------------------QKPKRGDRSRRDDDRYL 715 L G+ DG +P DL++ + R+ DD+ L Sbjct: 666 LAGLQDGAWPNLRLRDRILRADLLADVGAGRVAVGEDGREELIDSTRAARRAVLDDEYRL 725 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 F+ A+ ++ I + G +++ PSV +L+ Y+ +H ++ E+ Sbjct: 726 FVAAVTRSRS---IVHAGAVRSEDAA--PSVFF-DLVAYLAGTHRENDIVPVDPVEAPLS 779 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET---- 831 + H+ L R + + + + H T + Sbjct: 780 LSGHIADLRARAANSDEPADAQLAATLLALMAREGIASAQPHRWLGAGGTPTSAQDYRGQ 839 Query: 832 --VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV 889 + +R A P+R F + + + + + + Sbjct: 840 IVLSPSQFERALACPLRWFLT-TIGADAPSNAAASL------------GTLVHAVAEEHP 886 Query: 890 EQDDA---ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ-SMEIDL 945 E L R G G + + + LA V+ + Sbjct: 887 HGTPEELTEALEARIEELGYNLDTWAGRVSDRHAREIVNNLASYVVGVPGEVTVEQTVSS 946 Query: 946 ACNGVQITGWLPQVQP 961 GV I G + +++ Sbjct: 947 EVEGVTIRGRMDRLEQ 962 >UniRef50_C7XXL2 Recombination helicase AddA n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XXL2_9LACO Length = 1281 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 58/395 (14%), Positives = 121/395 (30%), Gaps = 92/395 (23%) Query: 385 EVEVLHDRLLAMLEEDP-----------TLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 EV ++ R+ ML+ + P DI+++ + ++ FG Sbjct: 561 EVWMVAMRIRQMLDNQERIYDPELGHERPIQPADIVILERTKSPNNRIVEQ-FGQL---- 615 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P + D + + ISLL + D+ + ++A+L P++ +TE + YL Sbjct: 616 NIPVVVQDVQNYFKATEVRTMISLLKVIDNPYQDIPLVAVLRSPIV----GLTEPEMAYL 671 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R R+G + V+ Q + + L Sbjct: 672 R-----INHRYGNFYEAVQFFTQQDPEQWSATTDVDLEKLHV------------------ 708 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEE--WLPVCRDMLNAFFLPDAETEAAMTL 611 L+ L +L + + AQ++ L + W + Sbjct: 709 ---------KLSRFLDRLTKF-KVTAQQQSLVDLIWQIYQTTGYLDYVGGIPGGSQRQAN 758 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + ++ + G + + + D VN+ T+ + + Sbjct: 759 LHALYERAHTYEQSSFKGLYQFIHFIERMQKRDEDLGEAPVELATDAVNVMTIHGSKGLQ 818 Query: 672 FKVVCLLGMNDGVYPRQLAPL----------GFDLMSQKPKRGD---------------- 705 F +V ++ MN + + G + P +GD Sbjct: 819 FPIVFVIDMNH-HFNSRDVAGNLVIEPHLGIGIRYLGDAPMKGDDQSLTAENIKVTYDLP 877 Query: 706 ----------RSRRDDDRYLFLEALISAQQKLYIS 730 R+ R ++ L AL A+Q+L ++ Sbjct: 878 QRTVVADAITRANRAEEMRLLYVALTRAEQRLILT 912 >UniRef50_D2R2V0 ATP-dependent nuclease subunit B-like protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R2V0_9PLAN Length = 967 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 88/617 (14%), Positives = 176/617 (28%), Gaps = 80/617 (12%) Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 P + + D L A+ +I + V D ++ ++ + A S Sbjct: 270 GPADQAAAVADWLRAL---GGKYHSDEIAIGVPD-EAIVSQLERELEQSGIKSR---AFS 322 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 Q+ P + + R +++ +L+ P L ++ + Sbjct: 323 GTTVGQTLP--SLLLDAIVAYVLRERYDELASLVRHPDLH----------DWIERKSAAD 370 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 G +D D V L+ ++ R + + +G S + + +A Sbjct: 371 GA---LDVDPVAALDEYYGEHYSARLDEELLAREASTTIPEGLSPSSAAHRRRTRSVARS 427 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL--IEQQWQA 618 V L+ +L R Q L W R +L + + + Sbjct: 428 VKTTVDLVHRLIAPLRTSKQP--LARWGEALRAILLEVYHGRQLDRRIPRDRMLLEATSM 485 Query: 619 IIAEGLG-----AQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + A+ AV LS D L + + I AG + + + + + Sbjct: 486 LAGALDAPAKVPAKLSPAVSLSAAIDLLVSPVLRSNIPPPAEAGAIELLGWLELPLDDAR 545 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG---DRSRRDDDRY-LFLEALISAQQKLYI 729 + N+G P F + G + R D + LF+ A A+ L + Sbjct: 546 AAIITTFNEGYIPAGEGSAMFLSSELRTTLGIQDAKRRVARDAFALFMLAESKAELLLVV 605 Query: 730 SYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 + + PS L+ E L F Sbjct: 606 ---AHRDVEKNPLAPSRLL-------------FATEPLEAARRG------------VQLF 637 Query: 790 DPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 P R + A + +S + P+ + + + A P R + Sbjct: 638 SALPATPTRRIALAPQLTRLSSGFQIPLPDTSLPIEDNF----SVSQFKAYLACPYRFYL 693 Query: 850 QMRLQVNFRTEDSEIPDTEP-----FILEGLSRYQINQQLLNALVEQDDAERLFRRFRAA 904 + L+++ + EP I + L + + ++ ++ D + L + Sbjct: 694 RHVLRLSSMN--DAADELEPRGFGSLIHDVLQSFGRSDEVRDSTHSTDIFDFLAASLQGI 751 Query: 905 GDLPYGAFG-----EIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQV 959 G + E +Q A A G + + Q+TG + Sbjct: 752 VSARLGERACRAAVRVQVEQIRSRLQAFAKWQAARTATGWRIVYTEDLDK-QLTGTMTID 810 Query: 960 QPDGLLRWRPSLLSVAQ 976 +LR R + Sbjct: 811 DKPVILRGRIDRIDRHD 827 >UniRef50_D2L2C1 UvrD/REP helicase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L2C1_9DELT Length = 1080 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 3/100 (3%) Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS-QKPKRGDRSRRDDDR 713 LA V I TL + + F V L + DG+ P A R D++R Sbjct: 950 LAEKVRIMTLHAAKGLEFAAVFLPALEDGILPFAGAAALTGAPGGTAGDPAGRMDEDEER 1009 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQEL 751 LF L A+ +L++S+ R S ++EL Sbjct: 1010 RLFYVGLTRAKTRLFLSHAKRRDLFGKRLALPRSRFLEEL 1049 >UniRef50_A6GBC2 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GBC2_9DELT Length = 683 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 60/204 (29%), Gaps = 26/204 (12%) Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 ++ G + + LA L +L P + + + E A Sbjct: 481 QAKGRAKDALVTLAKLFDRLLEA----GGRNPGRAIEIIVHEHYADYAERSFENADARKE 536 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR-FLAGPVNICTLMPMRSI 670 LS L L + + E + + + T+ + + Sbjct: 537 DLDNLANYAGRWE----DATEFLSEL--ALIEGISAENVVMGDEPDDKLVLSTIHQAKGL 590 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 + VV +L + DG +P A + +++R LF A A+ LY+ Sbjct: 591 EWPVVFVLWLVDGRFPSSQA------------LRANAELEEERRLFYVATTRAEDDLYLL 638 Query: 731 YIGRSIQDNSE---RFPSVLVQEL 751 Y PS + EL Sbjct: 639 YPTIEEGRRGPTTVLRPSRFLTEL 662 >UniRef50_C4Z991 DNA helicase II n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z991_EUBR3 Length = 1220 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 49/389 (12%), Positives = 110/389 (28%), Gaps = 101/389 (25%) Query: 385 EVEVL--HDRLLAMLEED----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 ++E L +R+ +++E + RDI+++ + ++ + AV Sbjct: 539 QIEALLIANRIRSLMENGMVTDKKTGQLRAVQYRDIVILSRSVATWGNTVAAVLKDCD-- 596 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +P + S ++ +S+L + D+ + A+L P++ + +E L Sbjct: 597 --IPAHVESNTGYFSSYEIQVILSMLRILDNPLQDIPMAAVLASPIV----GMDDEELAQ 650 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 +R A ++ Sbjct: 651 IR----------------------SAFKGVSFAQA---------------------ALSA 667 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA-----FFLPDAETEA 607 +G L + + R + + P+ E + ML+ + + Sbjct: 668 MAGEDGYEDEKLKAFALVFERLRGAV-ADTPIHE---LLYMMLDETGFYRYASAMPAGKR 723 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA--QRLDQERISQRFLAGPVNICTLM 665 I + A Y D + E + V I T+ Sbjct: 724 RRQNI-DMLIEMAAAYEKTSYKGLFHFVRYIDIQQKYEIDYGEADTAGENDDVVRIMTIH 782 Query: 666 PMRSIPFKVVCLLGM------------------------NDGVYPRQLAPLGFDLMSQKP 701 + + F VV + G+ PR P + ++ Sbjct: 783 KSKGLEFPVVFVSGLGKSFNTQDTKSDLVIHEKLGLGLVEKTKSPRTKRPS--LIRNEIE 840 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYIS 730 R R ++ + AL A++K+ ++ Sbjct: 841 SRIKRENLGEELRVLYVALTRAKEKIILT 869 >UniRef50_A8ZTY6 UvrD/REP helicase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZTY6_DESOH Length = 616 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 49/452 (10%), Positives = 121/452 (26%), Gaps = 93/452 (20%) Query: 308 RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 R ++ ++ + + + + +DI++ + D Sbjct: 254 RHFLSFEQRYADARVFKLEQNYRSADTIVRVANDIID-----------YNHDKMDKTCFS 302 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD--IDSYSPFIQAV 425 + ++ + E + + + + + + V+ Y Sbjct: 303 EESGGTVEIYEFDDEVEEARWVARKAEEL--NEDGVPYDAMAVLYRTKFTSLY------- 353 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 F A +PY + R + ++V+ + + ++AA F+ Sbjct: 354 FEHAFRRAGIPYHLLGDRGF-------------------YDRKEVMDI-NSYLMAAVFEK 393 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 + + R G+ + + TG + + + Sbjct: 394 DDTAFERIINI-----PRRGVGAKTLASINDMRTGAMSLQAAVH---------------- 432 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM--LNAFFLPDA 603 L E + L L + RP V + LN Sbjct: 433 --LALAERRLSD-----KVYQALSDLMALLDDIRDMRPDAAIREVIERIGYLNYLKQYAD 485 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 T + +I+ + L+ + L +E VN+ T Sbjct: 486 AGSMDFTEKVENIDQLISAAARME-----SLTAYLE--EAALIREDKDDEEGGFGVNLAT 538 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISA 723 + + + F V ++G + + P + D + ++ R L A A Sbjct: 539 IHAAKGLEFHTVFVVGCEENLLPHWKSLEEEDDLQEE------------RRLMYVAATRA 586 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 + L+++ + S + E+ + Sbjct: 587 ARCLFLT--AAGFRKGQFNRRSRFLFEIERSL 616 >UniRef50_Q6KHF5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mobile RepID=Q6KHF5_MYCMO Length = 723 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 51/402 (12%), Positives = 130/402 (32%), Gaps = 69/402 (17%) Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 + FH SP+ E + D++ L +I ++ + YS F A Sbjct: 318 QEVIFHHALSPELEARWVVDKI-KWLISIEKAKLSEISIIYR-ANFYSKN----FEDALL 371 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 + + + ++ +S + L S +L++P Sbjct: 372 RESIHHQVHGGEKFYERSEIKNALSYIKLLVSDSDL-AFQRILNIP-------------- 416 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 Q + +L Y ES +Q++ + Sbjct: 417 -----------------------------QRSIGNIYRNKILDYCDESNLSIFQAINNHL 447 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 E + + + L L+ ++N +++ + + D+ ++ A + Sbjct: 448 EDLPVSSNIREKLFDLIFKINKYQKIINENNVQVSVDEFFADI--KYYDYLANEDTFKNG 505 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + ++ + + + P +D + SQ V++ + + + Sbjct: 506 KVDNVKELL--IIISNWFRNNPKKTFQDYFEEISLVPNASQEDDKNTVSLMNIHNCKGLE 563 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS- 730 F V L+G+++ + P + A D S +++R L A+ A++ L+++ Sbjct: 564 FSYVFLVGLSEEILPSKKALEND---------FDDSNLEEERRLAYVAITRAKKMLFLTD 614 Query: 731 ---YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 Y+ + + + S + E+ + + ++ +N Sbjct: 615 SDGYLFGNFKTQKKT--SRFIGEMGIVLENENQKTMEQYMNS 654 >UniRef50_C5VEC7 Helicase, uvrd/rep family n=2 Tax=Corynebacterium matruchotii RepID=C5VEC7_9CORY Length = 1079 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 84/694 (12%), Positives = 192/694 (27%), Gaps = 88/694 (12%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA-MLEEDPTLT 404 + V+ E + + P + FH S E + DR+ L +D + Sbjct: 319 QFLQHHPVDHELRLHTSYRVQARPGAPGVHFHRADSTGNMFEFVADRIRRARLIDD--VQ 376 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR-QSHPVLEAFISLLSLPDS 463 RDI V+V + +P +A+ + +P I ++ A I + Sbjct: 377 WRDIAVVVRSVGMITPIRRALLAA-----GVPVHIDPTDIVLSQQRIVSALILAVRAVHH 431 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 ++ L + + +T L + V + R + A Q Sbjct: 432 GLTLAELEE-LALGPIGGADAVTLRRLLRGLRQV-----------ELRRTGAVAAAFQTP 479 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI---WRRGLAQ 580 R L +L +E + +++G + ++ L + Sbjct: 480 TRRSLE-VLSELVLEPEPDPGLVAEVEQVLTDREQDILGRIRQVIAAGRQGGSVEEVLWE 538 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 + ++ + + + + A + + + + + Sbjct: 539 IWSATNLDKHLSAVSMRGGAAGSQADRDLDAVMALFDAAGD-WVERRPNSTID-AFITHI 596 Query: 641 LAQRL-DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL-------APL 692 Q L R + + VNI T + V + G+ + +P Sbjct: 597 EEQELPTGVRDRRLVVPDAVNIVTAHATSGQEWHTVIICGVQEDSWPSLSETGTLFGQEE 656 Query: 693 GFDLMSQKPKRGD-----RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 DL+ G + ++R LF A A L I+ + PS Sbjct: 657 LVDLIDDGIAPGTTIARVTEQLREERRLFHMATSRATNTLIIT-AVDDPDAAEPQEPSRF 715 Query: 748 VQELID--------------YIGQSHYLPGDEALNCDESEARVKAHL--TCLHTRMPFDP 791 V++ + Q + S + A L + Sbjct: 716 VRDYMQPDSPEDPWEPQERVVGEQQIDVDNPLTYTRLLSAPAIVAELRRVVTNPDETQRA 775 Query: 792 QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQM 851 +N + A +P A ++ ++ A P+RA Sbjct: 776 RNQAARQLARLAEAGVPGAHPDQWWGIAGPSTTRSLPVSSLSPSRIEAGMACPLRATMSR 835 Query: 852 RLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL-FRRFRAAGDLPYG 910 + F L R ++ A+ D++ + A ++ Sbjct: 836 ----------IFTEEELVF---PLLRGRLLHAFAEAVALNVDSDVARLKIMDAYQEILAA 882 Query: 911 AFGEIFWETQCQEMQQLADRVIACRQPGQS------MEIDLAC---NGVQITGWLPQVQP 961 + + + DR + + +E++ G+++ G + +++ Sbjct: 883 PIW--LRSHRLDTWRTVLDRTKMWIETHRHIFEQVGVEVEAEVTIAEGMKLRGRIDRLEK 940 Query: 962 -----DGLLRWRPSLLSV-AQGMQLWLEHLVYCA 989 ++ ++ + + ++ L Y Sbjct: 941 TMDGDYHIVDFKSGTNHPSEKTIADHIQLLTYQL 974 >UniRef50_Q2YB42 DNA helicase/exodeoxyribonuclease V, subunit B n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YB42_NITMU Length = 930 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 87/663 (13%), Positives = 180/663 (27%), Gaps = 104/663 (15%) Query: 332 DNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD-SSITFHVCHSPQREVEVLH 390 D++ + + +LE + + ++ + ++ C E+ Sbjct: 194 DSVTPQWAALLAKLEEAGCEVDEMTRTDPAAHRFEVPYSPNRTVHRVECDVSNDEIYQAA 253 Query: 391 DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS----------APADRYLPYAIS 440 A +E+D T + ++V + Y + +F S R++P+ IS Sbjct: 254 VWARARIEKDSTAR---VGIVVPPLSEYRSSLVRIFSSVMDPDVRQALPGVPRHMPFNIS 310 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 A S+P++ +L L E LL P LA E L R Sbjct: 311 LGVALSSYPLVHTAFLVLELIQGEIEFERASLLLRSPFLA---GAETEMLPRAR------ 361 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 +D + E T L R+L VL E++ L Sbjct: 362 -----LDAKLRKRAEPVIT--------LERLL--------------VLVKRENNANCPLL 394 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 V L + + L + ++ F A + +++ + Sbjct: 395 VKLLWDCEKFCKKMSTDVQRPSTLARAISDILQLV-GFPGERAPDSSEYQTLKKWQDVLA 453 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 L + L P+ I + + F + ++G+ Sbjct: 454 GLALLDNVTIGMSYRQAISHLRGVAADTLFQPETPDVPIQILGVFEAGGMMFDHLWVMGL 513 Query: 681 NDGVYPRQLAPLGFDLM----SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS- 735 +D +P Q P F + +++ G + + F E ++A +++ +S+ S Sbjct: 514 SDEAWPLQPRPNPFLPIELQRAERLPLGSPAATLELASRFTEGWLAASKEVILSHARHSG 573 Query: 736 IQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ 795 D E PS L+ + + L D H Sbjct: 574 SSDTRELAPSPLIAHIATSDIRLFGLLPD----------------YVKHR---------- 607 Query: 796 PGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRL-- 853 + + V + ++ A P RA RL Sbjct: 608 -----DLIHQGRRLERIKDEPAPGIVSGKGGEGRARGGVAVIKDQAACPFRALALHRLHA 662 Query: 854 -QVNFRTEDSEIPDTEPFILEGLSR-----------YQINQQLLNALVEQDDAERLFRRF 901 + + + + E L++ + + L L+ E + R Sbjct: 663 EGLKTPHPGLDAGERGTLVHEMLAQVWERIKNKSALDALAEDELRTLLTSAAGEVIARMS 722 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ---PGQSMEIDLACNGVQITGWLPQ 958 + + ++ + + G+ + L + Sbjct: 723 ARHSHTLSERLARVEQRRLVRLAREWLEEERKRGDFTVVSTEARKSIEIGGLALDTRLDR 782 Query: 959 VQP 961 V Sbjct: 783 VDE 785 >UniRef50_C1PCZ8 UvrD/REP helicase n=1 Tax=Bacillus coagulans 36D1 RepID=C1PCZ8_BACCO Length = 723 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 54/378 (14%), Positives = 119/378 (31%), Gaps = 82/378 (21%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I F + + + L ++ + E+ +I V+ + S I + Sbjct: 331 IRFVRLPDYKYQAKYLAQNIV--VSEN----FSEIAVLYRNNMSSIALI-----NEFDRE 379 Query: 434 YLPYAISDR-RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +P+ + D SH V++ ++++ L + + D+LA + + IT++ + Sbjct: 380 GIPFYLKDTDNRFFSHWVVQDILNVMRLTFTDKRA-DILAQVHSKL---DGYITKQQMEA 435 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 ++ GIR + Q + +++ Y Sbjct: 436 VK------GIR-----------------------------------NNQSVFDNLVRYAN 454 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 + V + L ++ L + L L + + + Sbjct: 455 LKDYQVQKVRKVKETLREMRGMP-PLDAIHVIRGRLGY-EKALENMCKKFGFRKEYLIGV 512 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 + I + + + LA L + ++ A V + T + + F Sbjct: 513 LNTLEDIADTLVTME-----EFAARLKHLAHILKTAKGNKGRHA--VTLSTFHSSKGLEF 565 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL-YISY 731 + V ++ + DG+ P LM + + LF A+ A++ L +SY Sbjct: 566 EKVYMIDLVDGIIPGDDEKENDLLMEESVR------------LFYVAMTRAKKSLEMVSY 613 Query: 732 IGRSIQDNSERFPSVLVQ 749 R+ S S V Sbjct: 614 EKRN---GSRTMDSPFVA 628 >UniRef50_A4IKW7 ATP-dependent helicase/nuclease subunit A n=94 Tax=Bacteria RepID=ADDA_GEOTN Length = 1242 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 101/351 (28%), Gaps = 75/351 (21%) Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 RDI+V+V + + I+ + +P A + +SLL + D+ Sbjct: 589 YRDIVVLVRSMTNAPQMIEQ-----LQAQGIPAAADLSSGYFQATEISVMLSLLKVIDNP 643 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + + A+L P+ F E L +R + + T+ Sbjct: 644 YQDIPLAAVLRSPL----FRFDENELAMIR----------------------LSDPKGTF 677 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 L Q+ +G S L +L WR +A+ R L Sbjct: 678 FEAL----------------QAFCQKTAETGEEENAKEKAISFLNKLEEWRT-MARRRSL 720 Query: 585 EEWLPVCRDMLNAF-FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 + + + F+ + + + + L + Sbjct: 721 ADLIWQLYRDTQFYDFVGALPGGKQRQANLRALYDRARQYESTSFRGLFRFLRFIERLQE 780 Query: 644 RLDQERISQRFLAGP---VNICTLMPMRSIPFKVVCLLGMNDGVY--------------- 685 R + + R L V + T+ + + F +V L+G+ Y Sbjct: 781 R-GDDLGAARPLGDQEDVVRVMTIHSSKGLEFPIVFLVGLARPFYTRDLHSPYLLDKELG 839 Query: 686 -------PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 PR + + ++ + AL A++KLY+ Sbjct: 840 FAARFVHPRLRISYPTLPLLAIQVKKRLELLAEEMRILYVALTRAKEKLYL 890 >UniRef50_Q7US05 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7US05_RHOBA Length = 968 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 65/463 (14%), Positives = 133/463 (28%), Gaps = 80/463 (17%) Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGL---AQERPLEEWLPVCRDMLNAFF------ 599 DE + + L+ W L + +P+ +W + +L Sbjct: 394 SVDEPLPAEVQQTETADQIRTVLDQWLSPLIKNTEPQPIRQWSETLQAILLELHGEAAQT 453 Query: 600 -----------LPDAETEAAMTLIEQQWQAIIAEGLGAQ-----YGDAVPLSLLRDELAQ 643 + E +A+++ +Q +AI + V S+ + LA Sbjct: 454 LLPVDPDSMDESEETEPDASLSRTQQALRAIFRLLHRFADLNPSLDEPVEGSVAVEMLAS 513 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 R+ + R + + + + + + G+N P + F + Q + Sbjct: 514 RMSEVRWVDDPSPTEIELLGWLDLALDDSPALVVCGLNHPFVPEAQSGDPF--LPQSLRS 571 Query: 704 GDRSRRDDDRYL----FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 +D RY ++ L+++++ + +G D S PS L+ Sbjct: 572 TLHQSANDRRYARDVHAMQQLLTSRETVRF-LVGSHSADGSPTPPSRLLA---------- 620 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 +EA + + P P + +A Sbjct: 621 AATPEEAAKRVCDLLTIPRPKIVIEPVQP--PPAVSVDSQVFFAP--------------- 663 Query: 820 FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF------ILE 873 P P +T+ + + A P R + + L++ + F LE Sbjct: 664 -PPPEPGRTIDTLSVTAFSAYLACPYRFYLRHVLRLRPLDDSPLELAANQFGDLVHGALE 722 Query: 874 GLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA 933 R + +E+ E L R FG+ T +++Q R+ Sbjct: 723 EFGRGDYKNETDPKRIEEALIEELHRYAA-------KHFGDNTSTTVKLQVRQAQRRLKT 775 Query: 934 CRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 + + A G QI V + P + Sbjct: 776 VAL----RQAERAAAGWQIHAVEDAVDEKKI---HPITGKPKK 811 >UniRef50_B7GM51 ATP-dependent helicase/nuclease subunit A n=1 Tax=Anoxybacillus flavithermus WK1 RepID=ADDA_ANOFW Length = 1209 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 54/375 (14%), Positives = 106/375 (28%), Gaps = 81/375 (21%) Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 L+ + L RDI+++ + S S ++ + +P S + Sbjct: 573 RRLKGERRLMYRDIVILCRSMSSASAMLEE-----FRKQNVPVYAELSSGYFSATEVSIM 627 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 +SLL + D+ + + A+L P++ + EE L +R Sbjct: 628 LSLLKVIDNPYQDIPLAAVLRSPIV----GLDEEALARIR-------------------- 663 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 + G + L EL + L L+ W Sbjct: 664 ----------------------LAKKDGAFYEALCAFVQEPHDDELHEKMKRWLASLSEW 701 Query: 575 RRGLAQERPLEEWLPVCRDMLNAF-FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 R Q +PL + + N + ++ + + + Sbjct: 702 RTAARQ-KPLADLIWQLYRETNFYDYVGGMPGGKQRQANLRALYDRAKQYEQTSFRGIFR 760 Query: 634 LSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 + L +R D S V + T+ + + F VV L G + Q Sbjct: 761 FLRFIERLKEREDDFGAARSLTEQEDVVRMMTIHKSKGLEFPVVFLAGA-AKSFNMQDLR 819 Query: 692 LGFDLMSQKPKRGDR------------------------SRRDDDRYLFLEALISAQQKL 727 + L G R ++ + AL A++KL Sbjct: 820 SDYVLDKDFG-LGMRFVHPTWRASYPTVAQLAIKKKMKWQLLAEEMRILYVALTRAKEKL 878 Query: 728 YISYIGRSIQDNSER 742 YI + ++ ++ Sbjct: 879 YIVCTAKDMEAKKKK 893 >UniRef50_A9KTE6 ATP-dependent helicase/nuclease subunit A n=1 Tax=Clostridium phytofermentans ISDg RepID=ADDA_CLOPH Length = 1377 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 53/408 (12%), Positives = 117/408 (28%), Gaps = 69/408 (16%) Query: 383 QREVEV--LHDRLLAMLEEDPTL---------------TPRDIIVMVADIDSYSPFIQAV 425 +RE+E + R+ ++ + RDI++++ + +S Sbjct: 568 KRELEAKAVAMRIKQLVHGERGFSVTKRNGEEQDLKRCQYRDIVILLRTMSGWS----ET 623 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 F +P + ++ ++ L + D+ + A+L P++ + Sbjct: 624 FTEILKQEGIPAYSDTQTGYFQTLEVKTVLNYLRILDNPRQDAPLTAILYSPIV----GL 679 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELP-ATGQHTWRFGLTRMLLGYAMESAQGEW 544 + E L +LR ++ G + + + + Sbjct: 680 SAEQLSFLR-------VKPGKGAEKLSIYDAARECALNYLEIQDEVTQPEETQPVYDSII 732 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPD 602 Q+ L Y++SS + +L+ +R A L E +++ FF Sbjct: 733 QADLMYEKSSAEKTVSMDK--NLIETGEKLKRFFATYDKLREKAIYLPVHEIILEFFKET 790 Query: 603 AETEAAM-----TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD-----QERISQ 652 ++ L + L + + L E Sbjct: 791 GYDLFVYAMPGGEQRRNNLNLLVQHALSFEESSYHGLFQFIRYIERLLKFEIDYGEAGGL 850 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMN--------------DGVYPRQLAPLGFDLMS 698 V I ++ + + F VV L GM Y + + L + Sbjct: 851 SENDNAVRIMSIHKSKGLEFPVVILAGMGKQFNTMDAREKIVLHADYGIGPECIDYQLRT 910 Query: 699 QKPKRGDR--------SRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 + P + ++ + AL A++KL + D Sbjct: 911 KCPTLLKQVIKKNIVLDNLGEELRVLYVALTRAKEKLIMIGSANDAND 958 >UniRef50_UPI0001C4301D ATP-dependent nuclease subunit A n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4301D Length = 1135 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 83/661 (12%), Positives = 187/661 (28%), Gaps = 135/661 (20%) Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 +D+ V++ + + ++ A + + +PY + + F++LL + Sbjct: 532 FKDMAVLIP---ARTDLLK--LERAFSKQNIPYTVYGGIGFYERQEIIDFLTLLRWMNRP 586 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 F VL+LL P++ +T + + + + D +P TG Sbjct: 587 FEDVYVLSLLRSPLI----GLTMNDFVTIAKQKEAT--QSFADYLYQLSESMPQTGLADS 640 Query: 525 RFGLTRMLLGYAMESAQGEWQSV-LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + +L A++ + V S G + + L+ L I GL + + Sbjct: 641 SDLPAQQILDAALKLKEWLLNYVPFSIKGSPGETFDRMIKETGLVHSLLIQSNGLQKVKN 700 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 +E+ + + ++ + +E+ I + Sbjct: 701 VEKLIQMI-------------EQSHLRSLEEIIHFIDERMALNDKEGEAEME-------- 739 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL-------------------LGM---- 680 R VNI T+ + + F +V L LG+ Sbjct: 740 ---------RTEGDAVNIMTIHASKGLEFPIVYLPQLERSVQGDKGSVRFDAKLGIVWSL 790 Query: 681 -----NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 N P++L GF+L+ + ++ + LF A A+ L + Sbjct: 791 EEETDNLEARPKKLVTPGFELVKEAAGL---ESEEESKRLFYVAATRAKDYLVM----IG 843 Query: 736 IQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ 795 D +++ L++E D + + L + Sbjct: 844 NGDGAKKSWLHLIEEARDC---------GPLEDYITVVNEISEQLPHHAENHLYKGTELA 894 Query: 796 PGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQV 855 + Y + + + F P + + L V Sbjct: 895 AKKEVLY----------------------------PLSVSEIMTFIHQPEEYYEKYVLGV 926 Query: 856 NF--RTEDSEIPDTEPF--ILEGLSRYQINQQL--LNALVEQDDAERLFRRFRAAGDLPY 909 N R D E ++ + + L Sbjct: 927 NESRRLRSDADADQETRVQQVDPAVVGTLVHRACELRDYGFGAQEAVTEAMNYVDELNDT 986 Query: 910 GAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL--ACNGVQITGWLPQVQPDG---- 963 + + + + M+ ++ E G ++ G + +V Sbjct: 987 ASVKVSYEQEVSELMETYSEAQQTELGTPVENEWSFATEIAGAEVIGEIDKVVERDGCLH 1046 Query: 964 LLRWRPSLLS-------VAQGMQLWLEHLVYCASGGNGESR--LFLRKDGEWRFPPLAAE 1014 ++ ++ + + +QL+L + Y G+ S L++ +D E + E Sbjct: 1047 IIDFKTNRIKRSGSEWLAVYDVQLYLYKMAYEQETGHTISTMSLYVLRDKEKPLHTIHVE 1106 Query: 1015 Q 1015 + Sbjct: 1107 E 1107 >UniRef50_Q2NB36 Helicase n=4 Tax=Sphingomonadales RepID=Q2NB36_ERYLH Length = 994 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 72/597 (12%), Positives = 149/597 (24%), Gaps = 107/597 (17%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I +P+ E + + + L E R + V+ D + V Sbjct: 354 IRLMELPNPEAEAQAVALAVRQALAEPE----RRVAVITPD----RNLARRV-VHHLRRW 404 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 + S R F+ L + + ++ALL P++ Sbjct: 405 NIEADDSAGRPLAQTTAGRLFLLLAEVMGTNAAPVPLMALLGHPLVRQG--------EER 456 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 RQW+ + L R L G + V + Sbjct: 457 RQWLRDLR-------------------------ALERKLRGSRPAPGLAAIRPVAREAQV 491 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 + L G L + L + A + + Sbjct: 492 ID--------WWEEVEALLGPLAGTDDPLSLADCLDTLAAVGEALCGEALWAQEDGRALS 543 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PVNICTLMPMRSIPF 672 + + + + L +DQ + + V I L+ R Sbjct: 544 ATVEDLRQHARAVG--TQIRRADAHAILTDAMDQVAVRPPYGGHPRVAIYGLLEARMSRA 601 Query: 673 KVVCLLGMNDGVYPRQLAPLGFD---LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 +V G+N+G +P + + ++ G R + AL + + + + Sbjct: 602 DLVICAGLNEGSWPGRPSVDPLLAPPVLRALGVPGADFRIGLSAHDLAGALGAPE--VLL 659 Query: 730 SYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 S R + PS + + +G+ + L P Sbjct: 660 SRSERDAEG--PAIPSRFLLRVKALLGELLERYEERDLPRLAERIDDA----------PL 707 Query: 790 DPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 +P+ +P S E + + L R + P + + Sbjct: 708 EPRYQRPEPMPS-----------------------AEERRERISVTALDRLRSDPYQFYA 744 Query: 850 QMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN-ALVEQDDAERLFRRFRAAGDLP 908 L++ P + Q+ +L + + D Sbjct: 745 SAILRLKELDGLDAEPT-------PAWQGQLAHDILEHWHEHGGSLPDIAKAKLTEMD-- 795 Query: 909 YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEI----DLACNGVQITGWLPQVQP 961 + WE + + + I + ++ GV I G + ++ Sbjct: 796 HHPLTRALWEPRLMKALEWVASEIEGDMDRTPVLWEKWGEIEHRGVTIFGRIDRLDR 852 >UniRef50_D2B0K9 Superfamily I DNA and RNA helicase-like protein n=2 Tax=Actinomycetales RepID=D2B0K9_STRRD Length = 1228 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 63/411 (15%), Positives = 123/411 (29%), Gaps = 71/411 (17%) Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 L P D+ ++ + P ++ A +R +P + + P + ++ L + Sbjct: 427 LQPHDVAILARKRSQF-PALR----RALEERGIPVEVVGLGGLLTVPEVSDIVATLRVLY 481 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + ++ LL P R+ I L+ L + E + + Q Sbjct: 482 DPTAGDALVRLLSGP----RWRIGPADLKELGERARELN----RETREGGSMASDPLDQV 533 Query: 523 TWRFGLTRMLLGYAMES--AQGEWQS-VLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 R L A++ + EWQ P L ++ +L I R Sbjct: 534 VADMAEERGSLIDALDELPDRPEWQDLFSPLARV---------RLLAMAQELRILRAHTG 584 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP-LSLLR 638 Q P + + + R + + T A + P L Sbjct: 585 QPLP-DLIIEIERRLGLDIEVAARGTAIGPFAARADLDAFLDAAARFAGDSEDPTLGAFL 643 Query: 639 DELAQRLDQERI---SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV----------- 684 L ++E + + V + T+ + + + VV + GM+ + Sbjct: 644 AFLKAADEEENGLDAGRVGESNSVKLMTIHASKGLEWPVVVIPGMSQALSKAGTLTVGTM 703 Query: 685 YPRQ----------LAPLGFDLM---SQKPKRGDRSRRD--------------DDRYLFL 717 +P + L + L S P+ G S+ + ++R L Sbjct: 704 FPARPTTSPKWTDNPRKLPYPLRGDASDLPRLGGLSKEELAEFDERCRDRDLLEERRLAY 763 Query: 718 EALISAQQKLYIS-YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 A+ A L S Y S PS + E+ + G+ + Sbjct: 764 VAVTRAHYLLIASGYRWGSAA--KPLEPSDFLVEIRETCGRVSVWAPEAGE 812 >UniRef50_D2RKU1 Exodeoxyribonuclease V n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKU1_ACIFE Length = 1116 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 63/490 (12%), Positives = 133/490 (27%), Gaps = 99/490 (20%) Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD 441 Q E + + L ED L + +++ I + + A + +SD Sbjct: 475 QQAEGRYVAQAIRQ-LREDTGLPYGQMAILLPAI-----HLSRQYEEALTALGIKSQVSD 528 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL-RYLRQWVNES 500 + + +ISLL+ + + L P I++ L L+ W S Sbjct: 529 GKGFYERQEVVDWISLLTFLLNPRKDWALAGFLRSPYA----GISDRQLTDLLKPWPELS 584 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 + + + LE P L R L ++ +Q + + Sbjct: 585 -----LWESLRQSLEEPFVTLSRKLEALHRTALFQSLPELMDAFQEAFAVEPTLLAQRGG 639 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 LA+ R + + D +T + + Sbjct: 640 REKLANF---------------------RKLRALGVKGAMEDGDTARDFLDRLNLMRRLS 678 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 A + +Q V I T+ + + F V L + Sbjct: 679 AR------------------------ESAANQEADPEAVQIMTIHKSKGLEFPAVFLPDL 714 Query: 681 -----NDGV---------YPRQLAPLGFDLMSQK---PKRGDRSRRD--DDRYLFLEALI 721 ND + + ++ +L+ +G+++R + + + A+ Sbjct: 715 SKKNHNDTLGIQFLPGQGFGVRVPDAQGNLLETSVYTRLKGEKARLERAEKQRQLYVAMT 774 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 A++ LY+ I R P ++ + + G D + V L Sbjct: 775 RAEKYLYL--INVDESKEGSRPPDPDKEKWGQSLQRVFAPEGPHGDQMDWEKLDVAEILE 832 Query: 782 CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFW 841 T P + + A + +P+ + L + Sbjct: 833 NQETGQPGAGEAF-----------------VLDPAVYDRGRPVTVPRDLELSASALLEYD 875 Query: 842 AHPVRAFFQM 851 P ++ Sbjct: 876 TCPRSFYYHY 885 >UniRef50_C4ZAR0 ATP-dependent DNA helicase n=4 Tax=Clostridiales RepID=C4ZAR0_EUBR3 Length = 617 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 80/227 (35%), Gaps = 32/227 (14%) Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL---ASLLMQLNIWRRGLAQERPLE 585 R L ++ A + + + IAE + L L+ ++N + + Sbjct: 406 KRYLSRDSLCDATVAFDEWIKLFDEKPWIAERIEKLEYDMKLISRMNPY-------ASIN 458 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG--AQYGDAVPLSLLRDELAQ 643 + F E + ++ I+ E + E + Sbjct: 459 YIRRGI--GYDDFLA---EYAEYRNINKEDLFDILDEIQSGAKGFATYEEWYEHIREYTK 513 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 ++ +S+ V + TL + + F+ V ++ N+G+ P + A L D+ Sbjct: 514 QMKLMALSKESDPNAVTLATLHSSKGLEFENVYIIDANEGIMPYKKAVLEKDI------- 566 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 +++R LF + A+ L + Y +S+ D S + S V+E Sbjct: 567 ------EEERRLFYVGMTRAKTSLSV-YSVKSVNDKSAQ-ASRFVRE 605 >UniRef50_C2BJF9 Superfamily I DNA and RNA helicase n=4 Tax=Corynebacterium RepID=C2BJF9_9CORY Length = 1059 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 81/646 (12%), Positives = 170/646 (26%), Gaps = 84/646 (13%) Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + I S RE E + + L E+ T V+V +P A Sbjct: 388 KGEGEIQLAYFESEVREREFVAEYLKEQWEKREGDTFS-AAVLVRKNRHSAPIAAA---- 442 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 +P I P ++ +++ ++ + LL P+ + Sbjct: 443 -LDKAGVPNEIIGLGGLLWQPEIQDLVAIATMLVRPEDLPAAVRLLAGPIC----GLGIS 497 Query: 489 GLRYL-RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 ++ L + N +G R + E + R L + + G ++ Sbjct: 498 DIQALASRQRNLAGAR-----EERLRWEPGMDPEDYLRAQLEDVTAEEP-DQRVGLADAL 551 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 E + + + + +L R + +PL + + N A A Sbjct: 552 ADLGERDRYTPQGLARMEEVSAKLRHLRT-YSLSKPLVDIFADIEALFNIRTEVLARGSA 610 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 ++ I+A G + L E LD + V I T Sbjct: 611 GGATHLDKFADIVAGFHGDSLYALLDYFALALEKEDGLDLGEVPAA--TDRVQIMTAHKA 668 Query: 668 RSIPFKVVCLLGMNDGVYPRQ------------------------LAPLGFDLMSQKPKR 703 + + ++ VC++ + Y + F ++ K+ Sbjct: 669 KGLEWEHVCVVHADSSSYSAKAETFLSRIDKVPGDDDYIEVPEDAQKRSHFQNACEEFKK 728 Query: 704 GDRSRRDDDR-YLFLEALISAQQKLYISYIGRSIQDNS-ERFPSVLVQELIDYIGQSHYL 761 D + + ++ LF AL + L ++ G + + ++ P ++ L + Q Sbjct: 729 ADSAIKAEESARLFYVALTRTESTLTVTGSGTNNLNGKNKKAPYEYLERLKEQFPQYVVE 788 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDP--------QNYQPGERQSYAREWLPAASQA 813 ++ + + R W A Sbjct: 789 WSVPDEPSEDDFGESAQFPALQASPEAVAGADLVLEAMEELPDLSRGETFELWEQEAGAL 848 Query: 814 GKAHSEFVQP-LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL 872 + + QP + LP + + A P++ + R V PF Sbjct: 849 IEEYKALQQPVVDVELPSELTASDMVALRADPLQFARRQRRPV-------------PFKP 895 Query: 873 EG-LSRYQINQQLLNALVEQDDAERLFRRFRAAGDLP-YGAFGEIFWETQCQEMQQLADR 930 R L +LP + E + L Sbjct: 896 NSYAKRGTAFHAWLEDRFGSPA-------LLGEEELPGIDEPEDFDLEELKE--AFLNSE 946 Query: 931 VIACRQPGQSMEIDLACNGVQITGWLPQVQPDG-----LLRWRPSL 971 + ++ + G + V ++ W+ Sbjct: 947 WAERQPEHVEAPFEITIGESVVRGRMDAVFRLEDGTWMVVDWKTGR 992 >UniRef50_C7R1Q8 UvrD/REP helicase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R1Q8_JONDD Length = 1103 Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 69/488 (14%), Positives = 131/488 (26%), Gaps = 83/488 (17%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 A+ + S+T S Q E + + D T Sbjct: 371 HRIALPLASASALPLPTLSTRPGAGTGSVTVGYYLSAQDEAQGIADFFTRHFVPGMTTA- 429 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 V+ + P ++ + LP + P + +S+L + Sbjct: 430 ---AVLCRARKQF-PLLE----ETLRNAGLPVEVVGLGGLLHTPEIRDLVSMLEVVHDPS 481 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR-WGIDDDNVRELELPATGQHTW 524 + ++ LL P RF + + L W E R G L Sbjct: 482 RGDSLMRLLTGP----RFHLGAHDIHTLGVWARELSSRAHGYSGPPRGALR--------- 528 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW---------- 574 R ++ + WQ + S E + L++L+ L Sbjct: 529 EAADERSIVDALAQLPPRSWQGH-HGETFSEAGYERLTQLSALIDALRQQTYLALPEFVD 587 Query: 575 --RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 R L + + D A + + + + G + Sbjct: 588 ATERALGLDVEVALRAAHRHAETGTTDPSDPWGRAHLDAFRSVVTDFVHQAVHPTLGALL 647 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA-- 690 + + LD+ A +++ T+ + + + +V + ++DGV+P Sbjct: 648 AWLDDARDRERGLDRPTGHLDPHA--IHLITVHAAKGLEWDLVAVPALSDGVFPSTATTT 705 Query: 691 --------------PLGFDLMSQKPKRGDRSRRD------------------------DD 712 L F L P S D ++ Sbjct: 706 PRGPTDSGWTSHLGALPFSLRGDAPDLPHLSLADADHDAEIARRLTEFTAQCGHYQVAEE 765 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY----IGQSHYLPGDEALN 768 R L A A+ L ++ + PS + EL+D I PGD+ + Sbjct: 766 RRLAYVAYTRARTALLVTGAWWRTGKTAT-PPSPFLTELLDIDGVQIADLVTEPGDDNPH 824 Query: 769 CDESEARV 776 + + V Sbjct: 825 PPDGDTAV 832 >UniRef50_B0RA36 Putative helicase n=1 Tax=Halobacterium salinarum R1 RepID=B0RA36_HALS3 Length = 1211 Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 66/474 (13%), Positives = 126/474 (26%), Gaps = 118/474 (24%) Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 + L E L + I ++E + + +D L Sbjct: 501 ELFEYLLQPEGDTHEPYEAPPQE---LTTQRDRIEDIEGLTGSVEYLAVPDDADTAAELF 557 Query: 369 PLDSSITFHVC-HSPQREVEVLHDRLLAMLEEDPTLT-----------PRDIIVMVA--- 413 D + H+ + E + L RL + ++ P + P D +++ Sbjct: 558 GDDHPVAEGALDHTIEAEAQALAARLTHLFDDPPQVQDPDTGVHREATPDDTAILLRRRT 617 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 +D Y A + +PY + P ++A +LL + + + Sbjct: 618 HLDRYQ--------RALEEYDIPYTVVGGVGFYDTPEVQALTNLLRVLGDPEDDVSLYGV 669 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRW-GIDDDNVRELELPATGQHTWRFGLTRML 532 L P+ F + L V E+ W + + + +L TW R L Sbjct: 670 LRSPL----FGFAD---DRLAPAVAEADSVWDALAETDDPQLADAFDLLSTW-----RTL 717 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 G A S VLP W + Sbjct: 718 SGCAAPSEN----GVLP-------------------------------------WNRLLS 736 Query: 593 DMLNA--FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD---- 646 +++ + + E I + + + L + ++ + Sbjct: 737 RVIDDTGYLASVSADERGRQAIAN-VEKFRDQVRTWSENGVHTAAGLLHRIDRQAEIDPR 795 Query: 647 QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN------------------DGV---- 684 + A V I T+ + + F +V + + DG Sbjct: 796 EGEADIPGDAEGVRIMTIHSAKGLEFPIVTVPDLGSDLNFGRSVDDHGYVRLVDGTDDAP 855 Query: 685 -YPRQLAPLGFDLMSQKP----KRGDRSRRDDDR----YLFLEALISAQQKLYI 729 P P D S + + DR R +R L A + L + Sbjct: 856 PVPAVGGPDPGDAFSIEKTAVHEYADRQSRPQERAESKRLLYVACTRTRDHLLL 909 >UniRef50_A6Q6N6 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q6N6_SULNB Length = 776 Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 53/446 (11%), Positives = 119/446 (26%), Gaps = 76/446 (17%) Query: 562 GHLASLLMQLNIWRRGLAQE------------RPLEEWLPVCRDMLNAFFLPDAETEAAM 609 G + L L + + +E ++ + + FF E + Sbjct: 299 GRIYRSLDALYRYWQRHDRESVSLIERYGLLKEKIDSVSKTAQTGVENFFGFLEEIDLLD 358 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 +++ + L + + + L + + G V + ++ R Sbjct: 359 AEKQERVEEKYRHFLTLFRDETLTYKEWLFLWLKTLSKITLDDV-RGGKVTVLGVLETRG 417 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD--RYLFLEALISAQQKL 727 + FK V ++ N+G P + F + + G +R+D + + + L+ + Sbjct: 418 VSFKGVVIVDFNEGTVPASSSKDMFLNSTVRTFAGLPTRQDREALQKQYYNRLLQQAESA 477 Query: 728 YISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 I Y PS + EL +V L H Sbjct: 478 AIIYSSS-----ESNLPSKFLYEL---------------GLGKAERPKVPLSLLYGHPSQ 517 Query: 788 PFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRA 847 KA V +T L+ + + Sbjct: 518 --------------------------LKAEEAPVVEAFDATAQTWSASRLKTWLECKRKY 551 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSR-YQINQQLLNALVEQDDAERLFRRFRAAGD 906 +++ + + ED F+ L + Y+ + L D Sbjct: 552 YYRYIKNIKAKEEDELNE--GAFLHTLLEQLYKEQDSYASEKELTKRLHALMDELLLEED 609 Query: 907 LPYGAFGEIFWETQCQEMQQLADRVI-ACRQPGQSMEIDLACNGVQITGWLPQV------ 959 ++ E +++ D R + +E+ G++ G + ++ Sbjct: 610 AKNRYRKLLWREKLKGFVKKEIDHFKAEWRVVERELEVVGEIGGLKFKGRIDRIDQNATD 669 Query: 960 -----QPDGLLRWRPSLLSVAQGMQL 980 G + P L+ + Sbjct: 670 TLVLDYKSGRVEKEPKKLNPEKISDF 695 >UniRef50_B0PH90 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PH90_9FIRM Length = 167 Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 23/116 (19%) Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 + + V + TL + + F VV L G+N+G+ P D G ++R Sbjct: 68 YHSDAVTLMTLHGSKGLEFPVVFLCGVNEGIIPHTGTRGQSD-------PG------EER 114 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI-DYIGQSHYLPGDEALN 768 LF + AQ++L + G PSV + ++ D + +S E Sbjct: 115 RLFYVGMTRAQEELLLLTSGA---------PSVFLGDIPKDRLERSAVWTRPEEPA 161 >UniRef50_Q5YR01 Putative helicase n=4 Tax=Corynebacterineae RepID=Q5YR01_NOCFA Length = 1255 Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 68/499 (13%), Positives = 139/499 (27%), Gaps = 70/499 (14%) Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERISQRFLAGPVNICTLM 665 A ++ A + + L+Q+ + + V + + Sbjct: 754 QADRDLDAAVGLFDAAAAYVDRLPRAGIEGFVEYLSQQEIPHDTRPLTTPGEEVALLSAH 813 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGF-------DLMSQKPKRGDRSRR-----DDDR 713 + VV + G+ +G++P DL++ G+ R ++R Sbjct: 814 AAAGREWDVVAVAGVQEGIWPNPRPRGTLLHTEDLVDLLAGVGGAGEHVSRSAPILAEER 873 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 L L A A++ L ++ S+ + + PS + EL+ + D Sbjct: 874 RLLLVACSRARRSLLVT-AVESVTGDRDLVPSRFLAELLGHDEDGEPGVLPV---VDPGR 929 Query: 774 ARVKAHLTCLHTRMPFDP---------------QNYQPGERQSYAREWLPAASQAGKAHS 818 A V L DP + G R + EW A + + Sbjct: 930 ALVMHSLVAELRGAVCDPTADPERRRRAAFQLARLADAGVRGTAPEEWYGTAEL---SCA 986 Query: 819 EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRY 878 + + + T+++ P+R + P ++G + Sbjct: 987 DPLWSEEDDAVVALSPSTVEQLRTCPLRWALERHGG---------TDGDNPHAVKGSLVH 1037 Query: 879 QINQQLLNALVEQDDAERLFRRFRAAGDLP-YGAFGEIFWETQCQEMQQLADRVIACRQP 937 + Q L + E L + +RA P G ++ V R Sbjct: 1038 TLVQALAGRVPEAQVRAALDKAWRA--IDPGDGWHSRQERRRTEAMLETFLAWVRNTRGE 1095 Query: 938 GQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESR 997 +++ + V LP D RP + ++ L E Sbjct: 1096 LTQAGVEVPVDCV-----LPARSEDE----RPVRIRGR------IDRL------ERDEFG 1134 Query: 998 LFLRKDGEWRFPPLAAEQA--LHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQND 1055 F+ D + P++ + A L+ G P + ++ + + Sbjct: 1135 RFVIVDVKTGKNPISKQAAADHAQLATYQVAAASGALDPEGEPGGARLVYVAKPHTKEGA 1194 Query: 1056 AMLDDDSTLQKARTKFLQA 1074 D A + Sbjct: 1195 TQRMQDPLDAAALDSWRDT 1213 >UniRef50_UPI0000F51769 UvrD/REP helicase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI0000F51769 Length = 889 Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 42/400 (10%), Positives = 118/400 (29%), Gaps = 80/400 (20%) Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 + RE E + +++ +++D V++ +++ I F + +PY ++ Sbjct: 327 NASREAEGIANKIKCEIKKDK--KYSKFAVLLRSVNTSGDLIIDEF----KKQKIPYLVA 380 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL--RYLRQWVN 498 + A + + ++D + R+ +T+ L + + W Sbjct: 381 GNAGLFKRGEVLALAQIFC-----WFADDGFWYV------GRYKLTDNELLEKAIENWET 429 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 ++++ +L + ++ +G R+L ++ D+ + L Sbjct: 430 TVN---KLNNNIKDDLNHIKSSLNS--YGDYRVLYQDVLK-----RFDYSALDQDNDLDN 479 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 ++ ++ L + + + + + + M + Sbjct: 480 AILANIGRFTKVLGDYEQSVR------------------YGGGNKNIQKEMKDLCWFINT 521 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + + V + T+ + + ++ V L Sbjct: 522 YANHSYQEAKIEDLS---------------------KDNVVTVSTIHQSKGLEWQTVFLP 560 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDR--SRRDDDRYLFLEALISAQQKLYIS----YI 732 + + +P ++ Q R + D + LF A+ A+ +S Y Sbjct: 561 SIINKRFPSLTHFKSNLMIDQSLYEYSRYETSLDSEYRLFYVAVTRAKNYCLMSNFSAYP 620 Query: 733 GRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 SE +ID + + N + + Sbjct: 621 TGRKTSESEFM------RIIDKYEPVEDIEIETEDNFNST 654 >UniRef50_D0YTA7 Putative UvrD/REP helicase family protein n=2 Tax=Mobiluncus mulieris RepID=D0YTA7_9ACTO Length = 1180 Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 95/591 (16%), Positives = 180/591 (30%), Gaps = 103/591 (17%) Query: 218 ALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYL-AKLLTRQRRHSFEDRELPL 276 +L YLQAL+A GKH P D ++ L +++ + + + L Sbjct: 208 SLYEEYLQALEA-GKH------VAQPSLVLLDDWQNANGLMQEIVCQWAATGTQVVAVGL 260 Query: 277 FRDSENAGQLFNSDGEQDVGNPLLASW-GKLGRDYIYLLSDLESSQELDAFVDVTPDNLL 335 S N + Q + L A+ G+ R +L++ + L++F T + Sbjct: 261 ADLSCNEYRGGEPQALQQLAQRLQANLSGRKVR--QKMLTETYVNDRLESFWRDTVNTF- 317 Query: 336 HNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL-- 393 + + + + A K + S + + R+ + L Sbjct: 318 -GVSTTLDLWKPLGEAHPV------PQEKPSAEDGLSGVHLIEAANDARQYRFIGRFLQE 370 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 + + DP++ + V+V Q +P ++S+ + Sbjct: 371 VHLFS-DPSVPYSQMAVLVNSKAVGHSVCQQ-----LKSLGVPASLSEATS--------- 415 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI------- 506 + + RF + +L LL + A +D T+ + ++ WG Sbjct: 416 -----QINEGRFSA-WLLRLLKL-ACAKTWDFTD---FLITDFLQSEFFGWGSARLRQLD 465 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ--------GEWQSVLPYDESSGLIA 558 D +P + + + M + + W+ +L Sbjct: 466 DALKDLAYPMPRQSDFSQAADFESAISAWEMNTNKLGILPWVKEFWEDLLASRPFHNQDL 525 Query: 559 EL------VGHLASLLMQLNIWRRGLAQER---PLEEWL--------PVCRDMLNAFFLP 601 E LA L L + ++ + W+ R+ L Sbjct: 526 ETVFALGDAKRLAELYEVLVKVQDLWQKDSGNVQMMLWVLWDGLGRGEELRE-LTFTSEL 584 Query: 602 DAETEAAMTLIEQQWQAII--AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF-LAGP 658 D+ + L + A+ +Y + + L ++ Sbjct: 585 DSIVRDQLNLELDLVMDLFKAADWYEQRYPGGDAAVFAKKMFDRSLPTVSVAPHHQSTDA 644 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG------FDLMSQKP----------K 702 V I T + S +KVV + G+NDG +P + P FDL K Sbjct: 645 VTITTPIGAASRHWKVVAVAGLNDGAWPSRSWPGDLLGTSMFDLSRDDTGTDCANLEVIK 704 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 G + D FL A+ A + L + + PS LV L D Sbjct: 705 AGFQWSFHADLRRFLAAITRATETLVLGTTTGDFES-----PSPLVLRLAD 750 >UniRef50_A6W770 UvrD/REP helicase n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W770_KINRD Length = 1098 Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 81/515 (15%), Positives = 159/515 (30%), Gaps = 78/515 (15%) Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ-YGDAV 632 W R L + A+ A ++ A G + A Sbjct: 568 LWHLWDASGLAARWQ---RAALAGAVVEGADAGRADRDLDAVLALFEAAGRFEDRFPGAG 624 Query: 633 PLSLLRDELAQR--LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 D+L + AG V + T + +V + G+ +GV+P Sbjct: 625 SARRFLDQLMAAEVPSDTLADRAPDAGAVTLTTPQGAVGREWDLVVVAGVQEGVWPDLRL 684 Query: 691 PLGF-------DLMSQKPKRGDRSRR---DDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 D++ + G +RR +D+ LF A+ A+++L ++ R + Sbjct: 685 RGSVLGAQALVDVLQGRDPDGPGARRAVLEDELRLFHVAVTRAREELVVT-AVRDEDE-- 741 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM-PFDPQNYQPGER 799 PS + + D G +E V R P + +R Sbjct: 742 --RPSAFLDVVADAAGLRTRADEEEEPGLATVPRAVSLPALVARLRQVVCAPDAVETPQR 799 Query: 800 QSYAREWLPAASQAGKAHSEFVQ-----------PLPFTLPE-TVPLETLQRFWAHPVRA 847 ++ A L + AG A ++ + L E V ++ F Sbjct: 800 RAAAAARLAELAAAGVAGADPSEWYGVQELTDDGALRGPGEEVPVSPSRVESFERC---- 855 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGD- 906 L+ + + D+ G + + ++ + E D E R Sbjct: 856 ----GLRWLLESSGARPGDS-----TGQAIGNLVHRIASEAPEADAFELRRRLDLLWPTL 906 Query: 907 -LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQS-----MEIDLACNGVQITGWLPQVQ 960 LP G E + + +LA+ R G++ +++D+ ++ G + +++ Sbjct: 907 GLPDGWVAETARARALRMVDKLAEYHRDARAEGRTLVGVELDVDVQVGRARVRGRVDRLE 966 Query: 961 PDGLLR----------WRPSLLSVAQGMQLWLEHLVYC--------ASGGNGESRLFLRK 1002 D R +PS V + QL + L + ++ Sbjct: 967 RDAEGRAVVVDLKTGKVQPSRAEVERSPQLGVYQLAAQEGAFPAPPTGPTGTGGAVLVQL 1026 Query: 1003 DGEWRFPPLAAEQALH------YLSQLIEGYREGM 1031 G + P+ ++AL + + L+ EGM Sbjct: 1027 GGTQKKAPVQHQRALDEDDDPGWAADLLARAAEGM 1061 >UniRef50_Q2J6J7 UvrD/REP helicase n=2 Tax=Bacteria RepID=Q2J6J7_FRASC Length = 1124 Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 14/147 (9%) Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 L E A +++ TL + + + +V ++G DG+ P + P G P Sbjct: 969 TLAAEVDGLDPRADRISLLTLHASKGLEYGLVIIVGCEDGLLPMRFGPAGEAPGGGIPGG 1028 Query: 704 ------------GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQ 749 G + ++R LF + A+ +L ++ + S PS + Sbjct: 1029 GVNGTADGTADAGTKDAEAEERRLFFVGVTRARHRLVLTSAASRRRAGSVVTTRPSPFLA 1088 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARV 776 ++ + S G A R Sbjct: 1089 DIRPALLSSVPAEGVPAEGGRRRSRRP 1115 >UniRef50_B9CZT8 Putative uncharacterized protein n=2 Tax=Campylobacter RepID=B9CZT8_WOLRE Length = 863 Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 76/524 (14%), Positives = 146/524 (27%), Gaps = 86/524 (16%) Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 ++ G + E+ R ++ +++ AA E+ + Sbjct: 350 ELFAKFKNGFEEPCSFED----FRALMEEILALESDPAAAQKTREELF-----YAQSLAR 400 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + L + + +L + R+ G + + ++ R + F+ V +L ND + P++ Sbjct: 401 YFSFTLRQICEIFLIKLARLRLDHV-GGGKIGVMGVLESRGLKFEGVIVLDFNDDLVPKR 459 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDD--RYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 F + K G D + + + E+LI +K I Y N E+ S Sbjct: 460 SVNEMFLSSRVRQKAGLIGYVDRENLQRFYYESLIGGAKKAAICYAA-----NEEKIASR 514 Query: 747 LVQEL----------IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP 796 + E Y + + DE + + + Q Sbjct: 515 FLGEFNAVEDARFSDESYAALFNGEFDAKTGFADEQKFEAEMNPHLDEKNEAKSGQAKTA 574 Query: 797 GERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE-------------------------- 830 ER + + +F + Sbjct: 575 KERSLFEFDVQGELDSGANLVGKFDENATQNKTPSQNPRALNFIKFTRKTPAKPKIFEQD 634 Query: 831 ----------TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQI 880 + L + P R +++ L V + F L R Sbjct: 635 IIVKHDFFAIPLSFSRLNTYLQCPRRYYYRYILGVKPPVMPQTASAAD-FG-NSLHR--- 689 Query: 881 NQQLLNAL--VEQDDAERLFRRFRAAGDLPYG-AFGEIFWETQCQEMQQLADRVIACRQP 937 L E+ D + R P I E + R Sbjct: 690 --ALFEYYSKFERFDLAKFETVLRELNMPPLEREITMIEMEKFKAVEDARYEA--GWRVH 745 Query: 938 GQSMEIDLACNGVQITGWLPQVQPDG----LLRWRPSLLSVAQGMQLWLEHLVYCASGGN 993 G E+D GV+ITG + ++ G ++ ++ + E LV G Sbjct: 746 GLEKELDSVFAGVRITGKIDRIDGRGGELAVIDYKSGKFDAKSLQLPFYEALV----GRP 801 Query: 994 GESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLV 1037 E + KD +A E + L++ IE + P+ Sbjct: 802 CEGYFYDLKD---NMNLVAGEASTEALAEAIEQLKSINDTPINF 842 >UniRef50_C6Q0I3 UvrD/REP helicase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0I3_9CLOT Length = 736 Score = 70.5 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 47/355 (13%), Positives = 107/355 (30%), Gaps = 78/355 (21%) Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPADRYLPYAISDRRARQSHPVLEAFI 455 L ED + D V+ Y ++ + +P+ I D++ F Sbjct: 391 LCEDNSYNLEDFAVL------YRTNLENRSIVDLMLKKEIPFKILDKQ-------YNFFE 437 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 FV D++A L + + V R+ + ++ +++ Sbjct: 438 --------HFVCRDLIAYLK-------LSLDITDKESFGR-VINKPFRY-VSKVHIEKVK 480 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 + ++ ME + + I +L SL LN Sbjct: 481 KNINKESCFK---------ILMEIEDLPIFQIKNLERLENDILKLNK--MSLRDALNFIT 529 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 + L + E+ + ++ + + + YG +P Sbjct: 530 KDLGYYDYINEYSERLK--------------MESRELKDVIEEF--KASASDYGSIIP-- 571 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 + ++ + + +G V + T+ ++ + FK V ++ N+GV P + Sbjct: 572 -FLAHIEDVEEKLKNKSKEDSG-VILSTIHGVKGMEFKNVFIINCNEGVIPHINSI---- 625 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 +++R LF + A L + ++ S ++E Sbjct: 626 ----------PKNVEEERRLFYVGVTRAIDNLTLY--STNMFKGKSAHMSRFIEE 668 >UniRef50_Q5CVQ2 UvrD like super family I helicase involved in nucleotide excision repair, possible bacterial horizontal transfer n=2 Tax=Cryptosporidium RepID=Q5CVQ2_CRYPV Length = 917 Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 57/162 (35%), Gaps = 13/162 (8%) Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP-LSLLRDELAQRLDQERI 650 ++++ ++E + +I ++ + L L Sbjct: 735 SNLVDNINSNTEDSEKINSRKLSTLSSISTLLKYSEPYTPNDEQPTGYECLLCFLQDASN 794 Query: 651 S--QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 Q +++ T+ + + +KVV + D V+P ++ ++ D Sbjct: 795 GLLQIKKGEKISLSTIHRAKGLEWKVVFIPKFVDKVFPLYRESENLEIKNEF----DEIT 850 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 +++R + A A+++L++S + PS +Q+ Sbjct: 851 IEEERRIVYVAFTRAKERLFVSVPLNVGK------PSPFIQD 886 >UniRef50_A1W8E2 RecB family exonuclease-like protein n=4 Tax=Comamonadaceae RepID=A1W8E2_ACISJ Length = 856 Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 75/530 (14%), Positives = 142/530 (26%), Gaps = 120/530 (22%) Query: 454 FISLLSLPDSRFVSEDVLALLD-VPVLAARFDITEEGLRYLRQWVNESGIR-WGIDDDNV 511 +++L ++ VL L P + LR L W+ +G R W + Sbjct: 304 LMAVLQACAWDATADAVLDWLKQSPAV------DGAALRALEHWLRRAGARHWSGAATQL 357 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 + L AE A+L Q+ Sbjct: 358 QAL-------------------------------------------AERRPAEAALADQV 374 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA-ETEAAMTLIEQQW---QAIIAEGLGAQ 627 WR L RPL +WL R +L L D + + A + + + + + Sbjct: 375 QAWRAQLRAARPLAQWLQSLRVLLQDCGLWDGLQQDEAGARVLAELRLPEGLQDDLQDMD 434 Query: 628 Y-GDAVPLSLLRDELAQRLDQERISQRFLAGP-VNICTLMPMRSIPFKVVCLLGMNDGVY 685 G + L+ + + L+ R ++ V + L + + PF + L G ++ Sbjct: 435 GAGARMALADFTRWVGEVLECARYRPAYVDDAPVVVLPLPQLLARPFAALVLPGCDEKRL 494 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ-QKLYISYIGRSIQDNSERFP 744 P G +Q+ G +R + + +++ + + P Sbjct: 495 QAAPEPPGPWTQAQREGLGLPTRDLLAAAQRAAWRQALRIERVDLLWRVGDEG-GEPLLP 553 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 S LVQ L + + D + A L Sbjct: 554 SPLVQALR--LDGTGTDGADPRVTRSVPVAPTARPL------------------------ 587 Query: 805 EWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 LP + L+ P R F +LQ+ E Sbjct: 588 --------------PVGAQLPVQRLSSSAYSDLRH---CPYRFFALRQLQLQEDDELDAG 630 Query: 865 PDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET----- 919 D F G + + Q + ++ R + A E+ + Sbjct: 631 LDKRDF---GTWLHAVLQH-FHEALQDAPTGDAAARTALMDEAAARATRELGLQEGDFLP 686 Query: 920 QCQEMQQLADRVIACRQPGQS---------MEIDLACNGVQITGWLPQVQ 960 L + ++ + +++ G L +V Sbjct: 687 YASGWPALRAGYLEWLGKHEAAGACFRQAELRARQPLGALELVGTLDRVD 736 >UniRef50_A5D1P3 ATP-dependent helicase/nuclease subunit A n=2 Tax=Peptococcaceae RepID=ADDA_PELTS Length = 1269 Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 55/394 (13%), Positives = 106/394 (26%), Gaps = 96/394 (24%) Query: 385 EVEVLHDRLLAMLEEDPT-----------------LTPRDIIVMVADIDSYSPFIQAVFG 427 E ++ R+ +L P LT RD+ V++ Y+ F Sbjct: 586 EARLVARRIKELLGGSPGGEHALEIYDRELKKYRPLTYRDVAVLLRATAGYANS----FV 641 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 +P +E ISLL + D+ + +L P + + Sbjct: 642 EEFRREGIPAYAELSTGYFESTEVETVISLLKVIDNPRQDIPLAGVLRSPAV----GLKA 697 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L +R + S +G++ Sbjct: 698 GDLARIR------------------------------------------LASPRGDFYDA 715 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE--WLPVCRDMLNAFFLPDAET 605 + +G EL LA L +L WR +A++ L + W F Sbjct: 716 VVAASLAG-QGELSERLADFLKKLEEWRT-IARQGTLADLIWAVYRDTGYYDFTGCLPGG 773 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS--QRFLAGPVNICT 663 + + + + L + + V I + Sbjct: 774 GQRQANLR-ALHDRARQFETTAFRGLFLFLRFIERLREGGRDFGAARLLSEKENVVRIMS 832 Query: 664 LMPMRSIPFKVVCLLG---------MNDGVYPRQLAPLGFDLMSQKPKRGDR-------- 706 + + + F VV + G +N V + LG L+ + + Sbjct: 833 IHKSKGLEFPVVFVAGLGRNFNFRNLNKAVLFHKDLGLGPQLVDAEARVTRPTAAKLALK 892 Query: 707 -----SRRDDDRYLFLEALISAQQKLYISYIGRS 735 ++ + A+ AQ+KL + R+ Sbjct: 893 HRLKMEALAEEMRILYVAMTRAQEKLILVGSARN 926 >UniRef50_C0CXS0 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CXS0_9CLOT Length = 851 Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 59/406 (14%), Positives = 129/406 (31%), Gaps = 77/406 (18%) Query: 385 EVEVLHDRLLAMLEEDPTL-------------TPRDIIVMVADIDSYSPFIQAVFGSAPA 431 E ++ R+ +++ + L D+++++ + +S VF + Sbjct: 167 EARMVAIRIRELMDPENGLMVWDKGAEEYRPVRLGDMVILLRSLSGWS----EVFVNVLM 222 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 + +P + + +E +SLL++ D+ + A++ P++ +T+E + Sbjct: 223 NEGIPAYAQTKTGYFNTVEVETVLSLLAVVDNPMQDIPLAAVMKSPMV----SMTDEEM- 277 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 W+ + R T G R + G M + + V + Sbjct: 278 ---AWMMAAYKR-------------------TPEKGQDRGVYGAFMHWKENGGEGVDAPE 315 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 E+ I E + L +LL L R L + L + E Sbjct: 316 EAVEAIGEKLACLETLLEGLRRDARYLPVHQLLYRAFEA--GGYYDYVSAMPAGETR--- 370 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD-----QERISQRFLAGPVNICTLMP 666 ++ + + + L + + E A V I ++ Sbjct: 371 -RANLDMLVEKAIAYEATSYKGLFHFIRYIEKLKKYDTDFGEANVAGEQADTVRIMSIHK 429 Query: 667 MRSIPFKVVCLLGMN-----DGVYPRQLAPLGFDLMSQKP-----------------KRG 704 + + F VV L GM Y L L + +R Sbjct: 430 SKGLEFPVVFLAGMGKRFNKQDAYGAVLLDADLGLAADYLDLKQRLKMPTLKKQALKRRM 489 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 + ++ + A+ A++KL ++ RS+ E++ V + + Sbjct: 490 ELESMGEELRVLYVAMTRAKEKLIMTATDRSLGSKMEKWAQVPLAD 535 >UniRef50_D1V906 UvrD/REP helicase n=1 Tax=Frankia sp. EuI1c RepID=D1V906_9ACTO Length = 1243 Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 106/683 (15%), Positives = 180/683 (26%), Gaps = 94/683 (13%) Query: 328 DVTPDNLLHNIQS---DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR 384 D + L Q +L L N AG+ ++ S + RP L T H+ Sbjct: 466 DPAQVHQLTVNQRSGGRLLTLANAVAAGLPVDARSVTLRPRPAVALAGE-TIVALHTSWA 524 Query: 385 EVEV--LHDRLLAMLEEDPTLTPRD----IIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 E E L +L A L PR+ V+ + A LP Sbjct: 525 E-EAAWLAGQLAARLRAASPGDPREPGPSCAVLARSWADVPALVDA-----LGAAGLPVE 578 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 + + P + ++L + D + + LL P R + L L Sbjct: 579 VLGLGGLLTKPEIADIRAMLEVLDDPTANPAMTRLLSGP----RLRLGPRDLAAL----- 629 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL-I 557 G + LP + + A E Sbjct: 630 ------GRRAAELARSGLPGRPR-AVTAPADPLAEAVADVDPSDVVSLADALAEPGDEVS 682 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 AE L + +L R L V L+ A + Sbjct: 683 AEATRRLRAFADELAELRGHLGAGLVELVHRVVETTGLDVELELAAPRGGRGRENLAAFL 742 Query: 618 AIIAEGLG--AQYGDAVPLSLLRDELAQRLDQERISQRFLAG------PVNICTLMPMRS 669 + A+ A + DA + L L ER + A V + T+ + Sbjct: 743 RVAADFERSAAGFDDASGRASLTSFLGFLSAGERYERGLDADVPGTGRAVQVLTMHGSKG 802 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ---KPKRGD--------------------- 705 + + VV + ++ +P + + P RGD Sbjct: 803 LEWDVVAVPNISRTAFPDVQPGDRWITTPEILPTPLRGDAAELPVFEVAADRAAFDRFAG 862 Query: 706 ---RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 ++R L A A+ L S R PS + EL ++ Sbjct: 863 ECREQAEQEERRLAYVAFTRARWTLVASGHWWGPTQKMPRGPSPFLLELAEHAAGDGNGR 922 Query: 763 GDE-ALNCDESEARVKAHLTCLHTRMPFDP-QNYQPGERQSYAREWLPAASQAGKAHSEF 820 D A P +P ++ + R L +A A + + Sbjct: 923 VDHWADTPLAKTNPSLETPPVFTWPAPLNPVEHAARRDAADAVRGLLASAPAAARTAAAR 982 Query: 821 VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQI 880 P + + P R + + + E +L L + Sbjct: 983 AAGAPPAGGAGITAGDVDGASEEPSA-----------RDDRAGMTAQERALLAELDQET- 1030 Query: 881 NQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQS 940 + LL+ + RL LP G + LA ++ P Sbjct: 1031 -RLLLDEQLTARAPARLVA-------LPTGLTATQVM-KLRADPDGLARELVR---PMPR 1078 Query: 941 MEIDLACNGVQITGWLPQVQPDG 963 + A G++ W+ +V Sbjct: 1079 RPVPAASRGIRFHAWVEEVFERR 1101 >UniRef50_B8HW82 UvrD/REP helicase n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HW82_CYAP4 Length = 829 Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 78/219 (35%), Gaps = 27/219 (12%) Query: 543 EWQSVLPYDESSGLIAELV-----GHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDML 595 +++LP +S + + L Q WR Q RP V + Sbjct: 615 LLEAILPLLDSGRTARQALVAAYADQFRPLAAQFAQWRDLSHQLRPAALMEKVLWESGLY 674 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE--LAQRLDQERISQR 653 + + + + + Q + Q L + + LA+ LDQ + Sbjct: 675 DDYTREEKGDDRPALVHLYQLVDLFQYKDNLQLHPHTALRPILEFTTLAKSLDQLSREEN 734 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 L + T+ + + F V L G ++G P F + + R ++++ Sbjct: 735 LLP----LMTIHQSKGLEFDTVFLAGCSEGELP------SFFSLKEG-------RLEEEK 777 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 LF AL AQ++L+IS + +++ S V +L Sbjct: 778 RLFYVALTRAQKRLFISGYKTDSR-GAKKTLSRFVYDLP 815 >UniRef50_C1A6C2 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6C2_GEMAT Length = 702 Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 105/342 (30%), Gaps = 42/342 (12%) Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 +++ ++ YS + +F + P+ ++ R + LL L + Sbjct: 323 VLISRSMERYS---KQLFTARTDGER-PWLVTVRDESAQTAFV--VDRLLELHEQGTPLR 376 Query: 469 DVLALLDVPVLAARFDI--TEEGLRYLRQW-----VNESGIRWGIDDDNVRELELPATGQ 521 ++ L L+A +I + + Y +W + + I+ D L + Sbjct: 377 EMAVLFRAGYLSADLEIELSNRRIPY-EKWGGLKFLEAAHIK---DILAFVRLLENPRDE 432 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQ-----SVLPYDESSGLIAELVGHLASLLMQLNI--- 573 +W + L R+L G +A+ + P + + L Sbjct: 433 VSW-YRLLRLLPGVGDATARNAIELLNQHGWAPMAIGAVKAPARAKPGLLAMAALFDGMG 491 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 + E + + R + + + Q Sbjct: 492 RVERADRPHSPSETIRLVRQLYDPLLNATYDDAPPRLADLDQL----EIIAAGYTDRTEF 547 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L+ L E I + + T+ + + V ++ +DGV+P A + Sbjct: 548 LAALALEPPSSTQDLAIGSTDEDDALILSTVHSAKGKEWDAVFVIHASDGVFPMARAAV- 606 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 D ++ +++R L AL A+ LY+ Y S Sbjct: 607 -----------DDAQIEEERRLLYVALTRARNDLYVVYPLHS 637 >UniRef50_A1VQ25 UvrD/REP helicase n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VQ25_POLNA Length = 1141 Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 64/461 (13%), Positives = 127/461 (27%), Gaps = 85/461 (18%) Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA-AM 609 E +G + +A+L ++ L W+ + +L D Sbjct: 660 PELAGTSNATLARVAALFDGMSPTGNPWTI---LSTWVIDRLGLAKVLYLADDAQSRMKG 716 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-----GPVNICTL 664 + Q + GA L +R + L ++R + V + T+ Sbjct: 717 LALWQFLNFCRQQPSGAGAPCTRLLDRIRRLVL--LSEDRGLRHLPGVVDGIDAVRLMTI 774 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAP----LGFDLMS-----QKPKRGDRSRRDDDRYL 715 + + F V + GM PR L+ + +++ L Sbjct: 775 HASKGLEFHTVHIPGMVTSGLPRNNMAPRCVPPDGLIHGSDGITGLEAVKSGHEEEEECL 834 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 F AL A+ +L++ Y D R PS + + + S P ++ R Sbjct: 835 FFVALSRARDRLFL-YASSVQSDGRARNPSKFLTSIRHLLIHSPNPPQ------RSAKLR 887 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLE 835 KA L Q Sbjct: 888 AKACLQV---------AWAQKPVWTD---------------------------------S 905 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE 895 + F P R F+ L++ R ++ + + + ++ E + Sbjct: 906 QVNLFARCPRRFFYTHVLKLGGRRTETAFMKMHNVVGDVFDWLKTTHEM-TVPTEAELGA 964 Query: 896 RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP---GQSMEIDL-ACNGVQ 951 R + ++ G A + E + ++L D +I R + I L G Sbjct: 965 RFDQAWQVKG-----AIDHGYAEDYRRIARRLVDYLIETRSRGVLAPATPISLGWVEGEI 1019 Query: 952 IT--GWLPQVQPDGLLRWRPSLLSVA----QGMQLWLEHLV 986 + + + ++ R ++ L HL Sbjct: 1020 LVRPDSVARGDKGQIVVRRVKTGKPRSNAFDDIEYTLLHLA 1060 >UniRef50_D1VUK5 UvrD/REP helicase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUK5_9FIRM Length = 613 Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 68/226 (30%), Gaps = 27/226 (11%) Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 R + + ++ ++ Y + + LAS L L++ ++ Sbjct: 406 KRHIAYLKNKVTDNIFKELMAYPNLPPYYLKNISKLASDFKILKKM--KLSKALSFIQYE 463 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 L E + + DE RL Sbjct: 464 MGYNKYLE-------ENAKRLGENMNSISEYLFYISLIGENAK-----DIDEFIGRLKHL 511 Query: 649 RISQRFLAGP---VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 + R + + T+ + + F V ++ + DG P + A D Sbjct: 512 QFLLRKPNDSNINLFLSTIHSSKGLEFTNVFMIDLIDGNIPSKSAIDIL--------PDD 563 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 +++R LF A+ ++ L++ Y ++N + S + EL Sbjct: 564 TLGLEEERRLFYVAMTRTKENLFLIYPYY--RNNIKNEMSRFLIEL 607 >UniRef50_B5GJN9 ATP-dependent DNA helicase n=2 Tax=Streptomyces RepID=B5GJN9_9ACTO Length = 1129 Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 65/546 (11%), Positives = 135/546 (24%), Gaps = 86/546 (15%) Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 E L LL P+ + LR L + + ++ +P Sbjct: 519 ETALDLLASPLC----GMDAADLRRLGRALRA--------EERAAGNPVPLPSDVLLARA 566 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 L A ++A + L + G A L G W Sbjct: 567 LAEPERLIAHDAAYAKTARALGLLLARTRALLARGGTAE--EALWELWNGTR-------W 617 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL---SLLRDELAQR 644 + + + + A+ + ++ A Sbjct: 618 PARLERASRRGGAGGRNADRDLDAVCALFATAARAEERTGGRGALNFLAETEAQEIAADT 677 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF--------DL 696 L + V + T + + +++V + G+ +GV+P D Sbjct: 678 LSGRTVRP----DAVRLMTAHRAKGLQWRLVVVAGVQEGVWPDLRQRGSLLEADRIGSDG 733 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 +++ RG ++R LF A A +L ++ + +D PS + EL Sbjct: 734 LAEPLTRGA--LLAEERRLFYVAATRAADRLVVTAVKAPAEDGD--QPSRFLTEL----- 784 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 + L L DP+ + R AA G+ Sbjct: 785 ----GVEPQHLTVRPRRPLAVPALVAELRATTVDPRASPALREAAARRLARLAALTDGEG 840 Query: 817 HSEFVQPLP------------------FTLPETVPLETLQRFWA-HPVRAFFQMRLQVN- 856 P P + L + ++ F ++ Sbjct: 841 RPLVPSAHPGTWWGLADETVNEVPVRDPDQPLALSASALGQLVDVCALQWFLGREVRAEA 900 Query: 857 -------FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPY 909 F + D + ++ L+ + + + ++ + Sbjct: 901 PASTAQGFGNVVHVLADEVATGRSPADLDVLMER-LDTVWDGLAFDAPWKSAQER----- 954 Query: 910 GAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN--GVQITGWLPQVQPDGLLRW 967 + A R + ++ L ++I G + +V D R Sbjct: 955 ENARAALERFLRWHVLDRAGRTPVASE--HPFDVTLPAGEHEIRIRGTMDRVDADAAGRA 1012 Query: 968 RPSLLS 973 Sbjct: 1013 YVVDFK 1018 >UniRef50_C7MVN2 DNA/RNA helicase, superfamily I n=5 Tax=Actinomycetales RepID=C7MVN2_SACVD Length = 1066 Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 92/724 (12%), Positives = 174/724 (24%), Gaps = 112/724 (15%) Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 A + + + +P E + D+L + + Sbjct: 336 ATLPGTSAHRASVPTPTRGREGRGKVRTRLSPTPAAEAAWIADQLRRA-HLLDGVPWSQM 394 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYA-ISDRRARQSHPVLEAFISLLSLPDSR--F 465 V++ + P V A +P A +++ P + +++L Sbjct: 395 AVLMRSVSRSLP----VLQRALTMAGIPVAAVTEELPLARQPAVRPLLTVLWAAADPRVL 450 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 +E LL P+ G D + Sbjct: 451 DAETAEMLLSSPL--------------------------GGADPLALRRLRRGLRRLELV 484 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 G R S + +++ D +GL + + L + R + +E Sbjct: 485 AGGER-------SSDELLVEALRDGDVLAGLADAEAAPVRRVSRLLTVAREAMRSGAGVE 537 Query: 586 EWLPV------CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL-GAQYGDAVPLSLLR 638 + L +D L A A+ + Sbjct: 538 DVLWQVWQASGLQDRLVAQAAKGGTLGMRADRDLDAVVALFDAARRYVDRLPKAGVLGFV 597 Query: 639 DELAQRL--DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP----- 691 + L+ + V++ T + VV +LG+ +G++P Sbjct: 598 EYLSSQHIAGDSLAPVAVRGSGVSLLTAHGAVGREWSVVAILGLQEGMWPDLRLRGSVLG 657 Query: 692 --------LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF 743 G D + ++R LF A A+ L +S + Sbjct: 658 VERLVDLLSGVDDDAVATVSATAPLLAEERRLFYVAASRARHTLLVS-----AVQGEDEQ 712 Query: 744 PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA 803 PS +L+D G G + E + R +P R+ A Sbjct: 713 PSRFFFDLVDA-GVDTERGGGPDVRLVARERGLTLAELVGELRAAVTDTELEPRRRKLAA 771 Query: 804 REWLPAAS---------QAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMR 852 R+ A Q E + + P+R + Sbjct: 772 RQLARLARDGVPGAHPEQWYGLAGNSSDRPLREPDEVIRVSPSVVDTLVKCPLRWLLERH 831 Query: 853 LQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRF---RAAGDLPY 909 + + + L A E D + L++ A D Sbjct: 832 GGTDPAQLSAV-------------TGTLVHALAQAAAEGTDEQTLWKELDEAWAKVDAGA 878 Query: 910 GAFGEIFWETQCQEMQQLADRVIACRQPG------QSMEIDLACNG----VQITGWLPQV 959 F ++ + R Q M + L V +TG + ++ Sbjct: 879 PWFSRKERVRVEGMVRSFLTWLRQSRDELTQHAVEQDMRVSLPEAEGEPSVALTGRVDRL 938 Query: 960 QPDGLLRWRPSLLS------VAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAA 1013 + D R L + VY + G G R + Sbjct: 939 ELDAEGRPVVIDLKTSKSPVAKDAAAEHPQLAVYQLATLLGAFSGHKGHTGGARLLYVGK 998 Query: 1014 EQAL 1017 A Sbjct: 999 PNAK 1002 >UniRef50_B5YD55 ATP-dependent DNA helicase n=2 Tax=Dictyoglomus RepID=B5YD55_DICT6 Length = 656 Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 72/197 (36%), Gaps = 27/197 (13%) Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA-AMTLIEQQWQAII 620 G L L + P++ + + R N ++ E E+ +I Sbjct: 467 GRTLEGLRILKNIWDKIKV-IPVQNFSEILRVFFNEYYKDYLERNYPDFKDREKDVDQLI 525 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRL---DQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 L +Y L EL ++ + V + T+ + + + V + Sbjct: 526 --LLSERYD---DLEKFLSELTLYTYAGEKLLEEEEEEKDFVVLSTIHQAKGLEWHAVFI 580 Query: 678 LGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY-ISYIGRSI 736 L + G +P + +++R LF A+ A+++LY I+Y+ R + Sbjct: 581 LRLVQGDFPSYKSMDNI---------------EEERRLFYVAVTRAKRELYVITYLTRKV 625 Query: 737 QD-NSERFPSVLVQELI 752 +D N PS+ ++EL Sbjct: 626 KDMNVFTKPSIFLEELP 642 >UniRef50_B0MXL7 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXL7_9BACT Length = 948 Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 52/392 (13%), Positives = 115/392 (29%), Gaps = 50/392 (12%) Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA---M 609 + + L R + R ++L + D E + Sbjct: 405 VRNRRITVAAEWLACTPLLATLFRSVEGWRGFSDYLLAVIAQIARMPYEDTEARRRVEFL 464 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS-QRFLAGPVNICTLMPMR 668 +I ++ + + + +S+ L + L RI + + + ++ R Sbjct: 465 NVISEEVIKLRNSLNNCEIE--LSISIYTSLLRRHLQTLRIPYEGEPLEGIQVMGILETR 522 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPL----GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 ++ F+ V LL MND +P + ++L + Y F L A+ Sbjct: 523 NLDFRNVILLSMNDDNFPGSVVTGTSFIPYNLRAAYALPTPEHHEGVYAYYFYRLLQRAE 582 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 + + E+ S + +L +Y L + ++ + L Sbjct: 583 NVRMLYCAHADDKTTGEQ--SRYIYQL-EYETPFEILRREVGIDVNR-----METLPIEV 634 Query: 785 TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHP 844 + G+ + + L P + R+ A P Sbjct: 635 PKQ--------------------------GETAEKLARFLAPDDPVRLSPTAFFRYVACP 668 Query: 845 VRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAA 904 +R +F ++ E SE D F G + Q+L V + R + Sbjct: 669 LRFYFHSVARLEPDDEISEEVDAPMF---GTILHAALQRLYAPFVGKTGYGEALRALTRS 725 Query: 905 GDL---PYGAFGEIFWETQCQEMQQLADRVIA 933 ++ A E + + ++ + ++ Sbjct: 726 SEVEKAVVAAINENYLQDVEATVEDYSGNLLL 757 >UniRef50_Q897P0 DNA helicase II n=1 Tax=Clostridium tetani RepID=Q897P0_CLOTE Length = 720 Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 60/430 (13%), Positives = 141/430 (32%), Gaps = 83/430 (19%) Query: 328 DVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL---DPLDSSITFHVCHSPQR 384 + D L IQ + +N + + ++ + L + + I F Sbjct: 291 EYHKDGKLFFIQQNFRSDKNIVITANEFIKSNKKRYNKELFTENEEGNKIKFINTKDEYD 350 Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPADRYLPYAISDRR 443 ++ + L+ L+E L I+ Y I ++ +P+ I D Sbjct: 351 QI----NFLVKNLKEKSNLRETTIL--------YRNNISSIPIVDRLIQENIPFYIKDSV 398 Query: 444 ARQSHP-VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL-RQWVNESG 501 + V++ +S L F ++ A + + + ++ L L + + ES Sbjct: 399 PSFFNSWVVKDILSFFELA---FDLTNIDAFEKI-YYKMKSYVKKDDLNILYTRKIKESV 454 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 R ++ R+ + + + SG Sbjct: 455 FRTLYNNQGYSSANY-------------RL---------KSFEEKFMKLSSLSG------ 486 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 +N R L E + ++ + +N + I +++ Sbjct: 487 ------YKAINFIRYELNYEDYMMDYCDKFKFNINN-----------VQTILSILAMVLS 529 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 + + L+ L +++ + +F V + T+ + + F V ++ + Sbjct: 530 SCPTL---EDIDGKLI--YLKDEMEKSKYKGKF--NGVILSTMHSCKGLEFDTVYIIDLI 582 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 + + P + K K+ D S +++ L A+ A++ LY+ I ++N + Sbjct: 583 EHIIPSPES-------LDKSKKDDYSDFEEETRLMYVAITRARKNLYL--INTLTRNNKK 633 Query: 742 RFPSVLVQEL 751 PS+ V++L Sbjct: 634 CTPSIFVEKL 643 >UniRef50_C8PM70 ATP-dependent DNA helicase, UvrD/Rep family n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PM70_9SPIO Length = 1167 Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 72/553 (13%), Positives = 147/553 (26%), Gaps = 91/553 (16%) Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 L T D V++ + QAV+ +PY ++ L Sbjct: 551 EALHATRPCTWSDFAVLLR-----ASTHQAVYERFFRAFKIPYISVQQKGLFHDAPLNDI 605 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 +LL L L P + +++ L + E + Sbjct: 606 CALLRLAVYPNDRAVYAQTLRSPFVR----LSDRSFTRLMLYSLEHEGQPFNPAAAEELE 661 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 T R+ GY + + E + L YDE + Sbjct: 662 AEDRQYFLTACALFERI-QGYIKKKSNAELITALWYDE--------------------GY 700 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 R L E +L D L A + E + +++ + I Sbjct: 701 RYILLTEPRYHRYLE-LYDYLFALAVKADEAKQSLSAFIDTLISYIHA------------ 747 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM-NDG--------VY 685 +R++ I V I T+ + + F +VC+ N G V+ Sbjct: 748 -------EERIEDMEIPLEHGGDAVKIMTVHKSKGLEFPIVCIPDCGNAGKSETKEGMVF 800 Query: 686 ------------PRQLAPLGFDLMSQKPKRGDRSR-RDDDRYLFLEALISAQQKLYISYI 732 P ++ ++ ++ ++ + + L A+ A+ +L +S + Sbjct: 801 LHKDLGPVIHLPPETKNDPSANIFFEELRQEANAKHLAETKRLLYVAVTRAKVRLVMSGV 860 Query: 733 GRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 + D + P ++E+ + Q + + V + LH Sbjct: 861 QETGCDAEDLPEFP-RGLEEIRQQLVQPQQEEKNRSF-FQLLLPAVSDDIAGLHFAEVL- 917 Query: 791 PQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQ 850 P + + R+ + P P +P ++ + Sbjct: 918 PLPASTVQHTAEDRQRFNLDETRALYRQAAEKNFPLAEPRVIPATQFEKDTQ-----WL- 971 Query: 851 MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYG 910 RL F + +S +A + + +L Sbjct: 972 -RLSEAPLPSTEHTEKEIAFSADAIS-------ATDAASTAKPVDGNIGAEQGEDELSST 1023 Query: 911 AFGEIFWETQCQE 923 FG + + Sbjct: 1024 EFGTLVHKAMEAR 1036 >UniRef50_C6P6T0 UvrD/REP helicase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6T0_9PROT Length = 1134 Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 67/397 (16%), Positives = 115/397 (28%), Gaps = 85/397 (21%) Query: 381 SPQREVEVLHDRL--------LAMLEEDPTL---------TPRDIIVMVADIDSYSPFIQ 423 +P+ E E ++ L + D ++ T DI+V+V + Sbjct: 536 TPRDEAEEGARQIEAAQFAEMLQTIARDWSVNEGGQERRATYGDIMVLVRS----RTHL- 590 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 V+ A R++P+ S R E +LL + F + +L P+ F Sbjct: 591 TVYEEALRARHIPFISSRRGGLLDTLEAEDVQALLMFLITPFADLALAQVLRTPI----F 646 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 ++ L L Q E G + + +W L + Sbjct: 647 ACSDADLMRLAQNSAEYGATSSEGGAEISAQRSALGTRTSWWQRLQHL------------ 694 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR---DMLNAFFL 600 + L L W LA + P+ + L D+L + Sbjct: 695 --------------GDPSPALRRATGLLQRWLA-LADKLPVHDLLDRIYFEGDVLARYAA 739 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ-----ERISQRFL 655 A + A + L G L EL + D + Sbjct: 740 VLPPEMRA--KVAANLHAFMEIALSVDAGRYPSLPRFLQELRELRDSKDDAPDEGKLGSA 797 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDG-----------VYPRQLAPLG-FDLMSQKPKR 703 V I T+ + + +V LL N +P Q F L + + R Sbjct: 798 GDAVRIYTVHESKGLEAPIVWLLDANAEKRSMAGNDVLLDWPTQEPQPSHFSLYADQASR 857 Query: 704 GDR----------SRRDDDRYLFLEALISAQQKLYIS 730 G + + ++ L A+ AQQ L +S Sbjct: 858 GKKRAHLFEQDAAQQAREEMNLLYVAMTRAQQALIVS 894 >UniRef50_Q027B7 DNA helicase/exodeoxyribonuclease V, subunit A n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027B7_SOLUE Length = 1045 Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 58/396 (14%), Positives = 107/396 (27%), Gaps = 65/396 (16%) Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 L A L +LL + R + + + ++ P + Sbjct: 554 ENLGAALQRSEDALLQRFGARLHEWRGRREYVTFDRLLLEAIDDCGYPASGN-------- 605 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL----AGPVNICTLMPMRS 669 +A+ A + L ELAQ ++ A V I T+ + Sbjct: 606 --VDKFLAQARDAA--SRMSLDEFVMELAQVREENPREPDAPPEDSANAVKIMTVHSAKG 661 Query: 670 IPFKVVCLL----GMNDGV----YPR-----------QLAPLGFDLMSQKPKRGDRSRRD 710 + F VV + G++ GV + R DL +R + R + Sbjct: 662 LEFPVVFVAAIHKGVDTGVPAVAFSRHYGLGARWRNPASGQDKDDLFQHALRREWKQREE 721 Query: 711 DD-RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 ++ LF A+ A+Q+L +S+ R P + +++ + PGD Sbjct: 722 EESNRLFYVAMTRAEQRLILSFTAA------ARKPQNWDKLVMERLRIEPGTPGDAVKIF 775 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP 829 + + + + A E L + + P Sbjct: 776 EAPDGKQWKARILIAQA----------------APELLTRERTPNEEITVQFAVPPVVEE 819 Query: 830 ETVP---LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN 886 + + L F P + + L R +E L+ LL Sbjct: 820 QHDSNATVTALALFAGCPRKYYLNRYLGFEGRAARR----SEGAALDAGEFGTQVHALLA 875 Query: 887 ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQ 922 R P G E + + Sbjct: 876 GTAVASPDPEAVRLAEVFRQSPLGRRAENAVRIERE 911 Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 75/237 (31%), Gaps = 19/237 (8%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 E IE+ + +R D + S+ E + + R++ + P Sbjct: 413 ETLTAGAKGIEDRALVAGRRFDDAPEHSVEVIAAPETAIEAQWVARRIMEL--SGPEPQF 470 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 +D V+V + + + F A +PY ++ R + + LL + Sbjct: 471 KDFAVLVRNTE-----VIPEFTDAFDAAGIPYLVNRGRGFYASREVNDLTHLLRAIANPR 525 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 + +L P++ A + E L L+ G + L+ H WR Sbjct: 526 DEISLAVVLRSPLVNA----SVEALLRLKMNGENLGA--ALQRSEDALLQRFGARLHEWR 579 Query: 526 FG-----LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 R+LL A++ + + A L +M+L R Sbjct: 580 GRREYVTFDRLLLE-AIDDCGYPASGNVDKFLAQARDAASRMSLDEFVMELAQVREE 635 >UniRef50_C0GDI3 Recombination helicase AddA n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDI3_9FIRM Length = 1229 Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 83/658 (12%), Positives = 180/658 (27%), Gaps = 156/658 (23%) Query: 384 REVEVLHDRLLAMLEEDPTLTP--------------RDIIVMVADIDSYSPFIQAVFGSA 429 RE V+ ++L +L RDI++++ + + + + Sbjct: 554 REATVIAGQILVLLNGPDGARYVFDKEEKAYRPVTYRDIVILLRATSNSANRLVEILAR- 612 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +P + +E +SLL + D+ + A+L P++ +T E Sbjct: 613 ---HGIPAYADLSSGYFAATEVETMLSLLQVVDNPRQDIPLAAVLRSPLV----GLTVED 665 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L V ++G R + +VL Sbjct: 666 L----AAVRQAGER------------------------------------NDDFFDAVLA 685 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM--LNAFFLPDAETEA 607 + L L L L WR LA+ L ++ + + + Sbjct: 686 ASQQQFPG--LSEKLTDFLTTLERWRT-LARRETLATFITAVYRESGYSDYVAGLPDGAQ 742 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS-QRFLAGPVNICTLMP 666 + + A+ G LS + D V I ++ Sbjct: 743 RQANLRALFSRARQFDRFARQGLFRFLSFIEQLRRSGEDLGTARALGEKENVVRIMSIHK 802 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFD---------LMSQKPKR-------------- 703 + + F VV L + + Q L+ + K+ Sbjct: 803 SKGLEFPVVILGDLG-KTFNFQDQRSEMLVHRRLGLGPLIVEPEKKLRYPSLPYLALKIM 861 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYI------------SYIGRSIQDNSERFPS------ 745 G+ R ++ + AL A+++L + S+ + S Sbjct: 862 GEAETRAEEMRVLYVALTRAREQLILVGSARGLDKHLESWRQLLAHCGEQLPASELTRAR 921 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 + L + + + G ++ + LT + + GE + R+ Sbjct: 922 TYLDWLGRALIRHGDVEGRTETYTWQAGEESRFRLTVWDRESLSEIAVKREGEEEYTKRD 981 Query: 806 WLPAASQAG---------KAHSEFVQPLPFT---LPETVPLETLQRFWA----------- 842 + + + + + P+ LP + + L+R ++ Sbjct: 982 AILSLRRVKVDTADDLREEIRTRLAYKYPYARLDLPAKLSVSELKRRFSELEEEEGEKKA 1041 Query: 843 -HPVRA----FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL-LNALVEQDDAER 896 P F Q + ++ G+ +Q+ Q L L+ +++ E Sbjct: 1042 FTPTSWSRPAFIQQKAGLSPAER-------------GILYHQVLQHLDLSLSLDERGIEG 1088 Query: 897 LFRRFRAAGDLPYGAFGE----IFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGV 950 + AG L A + E ++ + + + L + Sbjct: 1089 QIHYLQKAGVLAEEATDYLDPGLIAAFFTSEAGRVVQKYRSEVYREWPFTLSLPAAEI 1146 >UniRef50_C6J3M4 UvrD/REP helicase n=2 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3M4_9BACL Length = 732 Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 63/420 (15%), Positives = 124/420 (29%), Gaps = 75/420 (17%) Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA-----DRYLPY-----AISDRRA 444 M E+P P +I +D YS ++ + + + Y +I+ Sbjct: 332 KMFTENPPHKPIEI----RHLDDYSDQVKYLVNEIQQIKNFAEVAILYRNNSSSIALMNE 387 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 + + S +V ED+L + + R DI L + + +G Sbjct: 388 FDRAGIPFYMKDADNRFFSHWVVEDILNFMRMTFTDKRPDI----LEKIH--LKFNGY-- 439 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRM-LLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 I + + L + + L R+ L Y ++ Q ++ L A Sbjct: 440 -ISKEQMAALLKIRNEESVFDNLLNRVPLKDYQVKQLQMCKETFQEMKGMPPLHA----- 493 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 + + R L E+ LE+ + I + I AE Sbjct: 494 -------IRVIRDRLGYEKALEKICE-----------WKGFRMEYLLGILNTLEEIAAEL 535 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 + + L L R + V T+ + + F+ V ++ + +G Sbjct: 536 ATME-----EFAARLKYLESILRTARTKRG--QNAVTFSTMHSSKGLEFERVYMIDLVEG 588 Query: 684 VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL-YISYIGRSIQDNSER 742 + P + D+M + + LF + A++ L ++Y R +E Sbjct: 589 IIPSKADKENTDMMEEATR------------LFYVGMTRAKKHLELLTYKKRD---GAEV 633 Query: 743 FPSVLVQ-----ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG 797 S V +L G+ + L L + + G Sbjct: 634 TESRFVAYVRYIQLPPQAGEPSSATSPSIPVPAQDNPNAIRRLAELREGESIVHRAFGKG 693 >UniRef50_C5B538 Putative DNA helicase II n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B538_METEA Length = 707 Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 57/384 (14%), Positives = 101/384 (26%), Gaps = 70/384 (18%) Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 S E + ++ + P I V+V P+ A Sbjct: 355 QVVAYDSEVAEAHGIAKAAKQLIADGTD--PSKIAVLVRSAWVLKPY-----EEAFLRAK 407 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P+A+ R + ++ L L S + + P + + + + Sbjct: 408 VPFAVVGGRNALDREEAKDVVAFLRLATSPRDDLAFRRIANKPA----RGLGQAVVEAVV 463 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 V+ SG + +V Sbjct: 464 GHVSASGRTF------------------------------------HEACLAVAEAGHLE 487 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 E + LA L L R + L E + + + + Sbjct: 488 PRACEGLEILAEGLRLLYA-RAAGTKPDGLVEIAVTRTGYEEHLDRSEGDRKERRATV-- 544 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 A++ L L + R R V I T+ + + F Sbjct: 545 ---AMLRRSARDAEDLTEFLETLALMSDLEFEGLREGAR-----VKISTIHAAKGLEFDE 596 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR------SRRDDDRYLFLEALISAQQKLY 728 V L GV+P A + + GD D++R L AL A+ ++ Sbjct: 597 VFLPCWESGVFPNPRAVDE----GVRGRPGDPWNGPIGGGVDEERRLAHVALTRARHGVH 652 Query: 729 ISYIGRSIQDNSER--FPSVLVQE 750 +SY I + PS L+ E Sbjct: 653 VSYATARIGFGAFLGAGPSALLAE 676 >UniRef50_UPI0001850E5A UvrD/REP helicase n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850E5A Length = 269 Score = 69.7 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 64/183 (34%), Gaps = 20/183 (10%) Query: 572 NIWRRGLAQERPLEEWLPVCRDML--NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 W+ + E + L + + L + D E LI++ + Sbjct: 97 QAWKVLIEDEENFSKALKILSESLVSAEMYNLDDNVENEQYLIQKDIDMWKEQWKK-YCS 155 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 +V ++ R +G +++ T+ + + ++VV L+G+N+G +P Sbjct: 156 QSVAGQRSLSHFRNQVSLGRTQTHNNSG-ISLLTVHMSKGLEYEVVFLIGLNEGTFP--- 211 Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI---QDNSERFPSV 746 + +++ AL A++ Y+SY + D + PS Sbjct: 212 ----------DYRARSTKEYNEELNNMFVALTRAKRICYLSYPQYKLMPWGDMKYQNPSR 261 Query: 747 LVQ 749 ++ Sbjct: 262 FIK 264 >UniRef50_Q71X99 ATP-dependent helicase/nuclease subunit A n=17 Tax=Listeria RepID=ADDA_LISMF Length = 1235 Score = 69.7 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 45/361 (12%), Positives = 111/361 (30%), Gaps = 78/361 (21%) Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 ++++ + RDI+++ + S +P ++ A + +P+ ++ + Sbjct: 576 KKMKQNRPIQYRDIVILARAMTS-APDME----EAMKVQDIPFYANNNSGYFETTEVATM 630 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 I+L+ + D+ + + A+L P++ + EE L +R Sbjct: 631 IALMKVIDNPYQDIPLAAVLRSPII----GLNEEELGQVR-------------------- 666 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 + + ++L Y + ++E ++ + QLN W Sbjct: 667 ---------------------MAKKNGYFYDALLTYKD--TTVSETADKMSDFIQQLNNW 703 Query: 575 RR-GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 R + + W F + + + + Sbjct: 704 RELSIRENLTSLIWQIYQETNFYEFVGGLPGGKQRQANLR-ALYDRANQYEKTSFRGLFR 762 Query: 634 LSLLRDELAQRLDQERIS--QRFLAGPVNICTLMPMRSIPFKVVCLLGMND-----GVYP 686 + L R D + V + T+ + + F VV + G++ +Y Sbjct: 763 FVRFVERLEVRGDDLGTAKTLGEKEDVVRMMTIHASKGLEFPVVIVSGLSRKFNMRDIYS 822 Query: 687 RQLAPLGFDLMSQKP-----------------KRGDRSRRDDDRYLFLEALISAQQKLYI 729 + L + S ++ R ++ + AL A++KL + Sbjct: 823 KTLLDKDYGFASNYRDIEKMIVYPTIMQQAMKQKKSREMIAEEMRVLYVALTRAEEKLIL 882 Query: 730 S 730 + Sbjct: 883 T 883 >UniRef50_D2BGG8 UvrD/REP helicase n=2 Tax=Bacteria RepID=D2BGG8_DEHSV Length = 972 Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 43/295 (14%), Positives = 90/295 (30%), Gaps = 36/295 (12%) Query: 564 LASLLMQLNIWRRGLAQERPLEEWL----PVCRDMLNAFFLP----DAETEAAMTLIEQQ 615 +L L W R + + + + D+L AF + + + L + Sbjct: 454 FTALARVLTDWSRRIHRPQGSSRIRLRPQQLVYDLLEAFNIAQTNFGDDIMRDIGLFSRM 513 Query: 616 WQAIIAEGLGAQYGDAVP--LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + + L+ L++ D V + T+ M+ + F Sbjct: 514 IMDVETVYMSVDSRQRFSEVLNFLQNAAETGYDVSTDDVLQRPDAVTVSTVHKMKGLEFP 573 Query: 674 VVCLLGMNDGVYPRQLAPLGFDL----MSQKPKRGDRSRR-DDDRYLFLEALISAQQKLY 728 V ++ + +P++ + L M+ RG D++ LF A A++ L+ Sbjct: 574 CVFIVDVEAHRFPKRRSSYSGWLPPGVMTSAINRGAYQSTPDEEIRLFYTAATRAERYLH 633 Query: 729 ISYIGRSIQDNSERFPSVLVQELIDY-------------IGQSHYLPGDEALNCDESEAR 775 +S Q S +L + I Q+ E + S Sbjct: 634 VSGAENLPQARRPARRSPYALQLATHPAVVQNAGGLPPGIVQATPRRRVEDADYPTSFTE 693 Query: 776 VKAHLT--------CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQ 822 +K +L + P P+ + G+ + + L + V+ Sbjct: 694 IKYYLQCPRGYQLRQRYGLNPVIPEMFGYGQTVHTSIQKLHELYPNTPPSQDQVE 748 >UniRef50_B3R0N7 ATP-dependent DNA helicase n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3R0N7_PHYMT Length = 708 Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 29/349 (8%), Positives = 111/349 (31%), Gaps = 62/349 (17%) Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 + +EV+ + +++ +++++ DI ++ ++ F + +PY + Sbjct: 322 NDDQEVDFVAEKIKNLIKKEK-CNYEDIAILYR-----LNGLEKKFEKIFLKKNIPYIVF 375 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 + ++ ++ + + + +++VP I ++ + L E Sbjct: 376 GNINFFNRKEIKDILAYIKILIDPKQDFYLKRIINVP----SRKIGKKTISNLEIISKEK 431 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 I + L + + L + + + Sbjct: 432 NI--------------------SLFETLILLCKEEKKCNKNLLNFKNLILEMIKKINSNS 471 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 L +++ +++ + + + P+ + + ++ + Sbjct: 472 FLKLENIID-------------YIDQKVNYSKSINKKKINPENDNLTYIEDLKSFFTKKK 518 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 + + D L ++ ++ V + T+ ++ + FK+V ++ Sbjct: 519 DQDKKKTVKQEL-----IDIL-DQISLNNEVKKDNKNKVTLSTIHKIKGLEFKIVFVVYF 572 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + + P + + +++R + A+ A+++L++ Sbjct: 573 EENILPLKNNKYN-------------APLEEERRIAYVAITRAKERLFL 608 >UniRef50_A3QCD6 UvrD/REP helicase n=7 Tax=Gammaproteobacteria RepID=A3QCD6_SHELP Length = 678 Score = 69.3 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 49/162 (30%), Gaps = 8/162 (4%) Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 L +L R L L F T + + + Sbjct: 452 LERLASVRNKDDDSVLASNVLQHLS--LAGFIEGVGSDSVRRTASNDRLRG-VDRIEELL 508 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 + + + + + P+ + T+ + + + V L+G+ND +P Sbjct: 509 ISNPIDARTFLNLIL-----HPQDISADSEPITLATIHGSKGLEWDHVILIGLNDCEFPG 563 Query: 688 QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 G L + + + +R LF + A+ +L++ Sbjct: 564 GKPDSGTQLPALTSESISNEELEVERRLFYVGITRAKHQLHL 605 >UniRef50_C7MLK5 Putative uncharacterized protein n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MLK5_CRYCD Length = 990 Score = 69.3 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 65/477 (13%), Positives = 150/477 (31%), Gaps = 55/477 (11%) Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 E L+ +L GH L L + L ++ AE AA+ Sbjct: 387 EQEELLCDLAGHAEEDLQGLIGLIEQDDLPQALSVLESYIVRHFSSQPGYAAEQFAALQY 446 Query: 612 IEQQWQAIIA------EGLGAQYGDAVPLSLLRDE---LAQRLDQE--RISQRFLAGPVN 660 + + +A +A + + +PL+ D + ++D + SQ V Sbjct: 447 VSRVVEAALAIGKSPAQMIRHVETAQIPLAFDTDSGSQINDQIDSQIKDTSQIKGTHRVL 506 Query: 661 ICTLMPMRSIP---FKVVCLLGMNDGVYPRQLAPLGFD-LMSQKPKRGDRSRRDDDRYLF 716 CTL ++ + M YP D L+++ ++ R F Sbjct: 507 FCTLDEAAALEPASAHTIIAADMTAQSYPIVENVDAADTLLAKWGLVTTDNKMAASRQKF 566 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 AL++A+ ++ + + + E+ P+ L +E++D P + + + Sbjct: 567 SAALLAARNRVVMQRTMHNGLADEEQ-PAALFEEVLDCYRGD---PTSRDSDDTTTRVPI 622 Query: 777 KAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL-----PFTLPET 831 + +N ++ + P F+ Sbjct: 623 SLAPFTHLSGEEHLVENTLGHAQRVASETDRPIMGSITPQARSFIVLNRRYHGHTFPGMD 682 Query: 832 VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQIN---------- 881 + ++ + P + F + RL++ E + FI L + + Sbjct: 683 LSASQIESYLECPYQWFAKRRLKLESLDEGFGPAERGTFIHAVLESFYLRFQAEVQPKVT 742 Query: 882 -------QQLLNALVEQDDAERLFRRFRAAGDL-PYGAFGEIFWETQCQEMQQLAD---R 930 ++++ A+ Q + R P A+ E + ++ + R Sbjct: 743 PSTLGQAREVMQAVFSQVAERQFTDRHLVGNRYVPINAWEERQRDKVLDQLLDYLEFECR 802 Query: 931 VIACRQPGQS-----MEIDLACNGVQITGWLPQVQPDG-----LLRWRPSLLSVAQG 977 ++ +P + + + G + G + ++ D ++ ++ SL S + Sbjct: 803 LLPSFEPWKFEWAYGEDTPYSYAGCNLVGRIDRIDRDRAGQVVIIDYKSSLSSAYRL 859 >UniRef50_C0FS43 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FS43_9FIRM Length = 1182 Score = 69.3 bits (168), Expect = 9e-10, Method: Composition-based stats. Identities = 54/392 (13%), Positives = 117/392 (29%), Gaps = 59/392 (15%) Query: 385 EVEVLHDRLLAMLEEDP----------TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 E +++ + + +++ P DI++++ + ++ + V Sbjct: 558 EAKIVAEEIRHLMKTQPVTDKATGELRAARYSDIVILLRSLSGWADSLVEVLNGNG---- 613 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P S ++ +S+L L D+ + A+L P +T+E L LR Sbjct: 614 IPAHTVSSTGYFSTVEVQTVLSMLRLLDNPRQDIPMAAVLRSP----MAGLTDEELAVLR 669 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + + G + LEL G + A A + Q +++ Sbjct: 670 --LED-----GSVPFHEAVLELAEGLYE--EDGQKEISDSEADSEADQK-QGRNADEKTE 719 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLI 612 I + R L + P+ E + + + + Sbjct: 720 NHIEITAHRKLLKFYKKYKQLRQLVPDTPIHELIEIILRETGYGHYVAAMPAGNRRTANL 779 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ---RLDQERISQRFLAGPVNICTLMPMRS 669 + A Y DEL + + + V I ++ + Sbjct: 780 NMLLEK-AAAYEKTSYKGLFHFVRYIDELQKYDVDFGEADM-VGENEDVVRIMSIHKSKG 837 Query: 670 IPFKVVCLLGMNDGVYPRQLAPL----------GFDLMSQKPKRG-------------DR 706 + F +V + GM + +Q G D M K + D Sbjct: 838 LEFPIVIVSGMG-KNFNKQDTRSKMVLHPELGIGLDYMDGKKRIKSPTIAKKAIAKQIDL 896 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 ++ + AL A++KL ++ + + Sbjct: 897 ENLGEELRVLYVALTRAKEKLILTGTLKDAPE 928 >UniRef50_D2QPX2 Putative uncharacterized protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QPX2_9SPHI Length = 1039 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 89/288 (30%), Gaps = 34/288 (11%) Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL---GFDLMSQKPKRGDRSRRDDD-- 712 + I ++ R++ F V +L +N+G+ P+ FD+ + + + + Sbjct: 589 QLQIMGMLETRALDFDRVIILSVNEGILPQSRKLNSLIPFDIAADENIKLPTYSEQEAVM 648 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 Y F L A + + + NS+ PS +++L + + Sbjct: 649 AYHFYRLLQRASEVVLLYTTSTDAYGNSKGEPSRFIRQLEHELVPRSNGLVRISYPTVRF 708 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV 832 + T L K S + + + + Sbjct: 709 GRTSEKKETSLTEL-------------------------SVPKTESVRDGLINLLITKGL 743 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL-LNALVEQ 891 L +F + +R +F + ++ + E F G +++ ++L L ++ Sbjct: 744 YPSYLNQFVSCSMRFYFSRIVNISEEEDIEEKMGAAEF---GSWLHKVMERLDLEYRLKA 800 Query: 892 DDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ 939 + + + G + + LA +++ Q Q Sbjct: 801 LPIDESIIKMLLEEEFASTNKGRVIESGMNLLLYDLAQKLMLDFQRQQ 848 >UniRef50_C4LER9 UvrD/REP helicase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LER9_TOLAT Length = 698 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 12/97 (12%) Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGV--YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 + ++ + V LGMN+G +P K ++R LF Sbjct: 598 IEFMSVHASKGKEADYVIALGMNNGKYGFPSLKETDPILEFLLPEKE--TFSYAEERRLF 655 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 AL A+ ++Y+ Y PS + ELI+ Sbjct: 656 YVALTRARHRVYLVYH--------PAEPSPFISELIN 684 >UniRef50_C8NWA9 ATP-dependent DNA helicase n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NWA9_9CORY Length = 1040 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 83/653 (12%), Positives = 168/653 (25%), Gaps = 126/653 (19%) Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI--SDRRAR 445 + D L + + RD+ V+V + P +P AI +D Sbjct: 323 FVADTLRRA-HLEEGVPWRDMAVVVRSVGMIEPL-----RRTLLQAGVPVAINPTDLVLG 376 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 + V + L + + R+ + G G Sbjct: 377 EQRIVAAMLLGL-------------------------RALNGLDATHWRELLL--GPVGG 409 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 D +R L + A+ ++ ++L E L Sbjct: 410 ADPVTLRRLLRGLRRWRPEVRAEDTLSELLALRGELPDFGAILTQRELD--------ILD 461 Query: 566 SLLMQLNIWRRGLAQERPLEE-----WLPV-CRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 + L R L +EE W + L A L + A+ Sbjct: 462 RIRGVLEAGRTSLDDGGSVEEVLWAVWAQTGLAESLMAIALRGGAAGSQADRDLDAMMAL 521 Query: 620 IAEGLGAQYGDAV-PLSLLRDELAQR--LDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 + + ++ R + + V + T + F V Sbjct: 522 FDAAGDFTERRPTATIEAFIAHIEEQELPTGVRDRRTAVPDAVPLLTAHGVAGREFARVI 581 Query: 677 LLGMNDGVYP-------RQLAPLGFDLMSQKPKRGDR-----SRRDDDRYLFLEALISAQ 724 + + + +P DL+ Q R ++R LF A+ A Sbjct: 582 VSEVQELSWPTLSETGTLMRQEDLIDLVDQGIDPATPVSHTVDRLKEERRLFHVAVTRAT 641 Query: 725 QKLYISYIGRSIQDNSE-RFPSVLVQE--------------------------LIDYIGQ 757 +++ ++ D E PS VQ+ L D + Sbjct: 642 EQVIVT--AVDAPDGDEVIEPSRFVQQFADARGTIPEHVSTGTAASGAAEQQTLFDGVDT 699 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH 817 S + ++ + R D + + + Q+ + A + A Sbjct: 700 STTGREEVHVDVAPVRVLAVEDIVAELRRAITDESSSEDVKLQAARQLARLAEAGVPGAD 759 Query: 818 S-------EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 E P + ++ P+R + D P Sbjct: 760 PGQWWGIREASISEGVEPPGRLSPSRIEGLLECPMRNVLER--------------DVAPA 805 Query: 871 ILEGLSRYQINQQLLNALVEQDDAE----RLFRRFRAAGDLP----YGAFGEIFWETQCQ 922 + ++R + A+ D E +RA +P GE + Sbjct: 806 SSDAMTRGTLAHYFFEAVGNGADVELAQADTLEAYRALFTVPSWKEVSDLGE--FTRLLG 863 Query: 923 EMQQLADRVIACRQPGQS-MEIDLACN-GVQITGWLPQVQPDGLLRWRPSLLS 973 Q + + + + +D+ G++I G + +++ + L Sbjct: 864 RAAQWVEETRGTFELVDTEVPVDVEVAPGLRIGGRIDRLEREESGAVHIVDLK 916 >UniRef50_B9KFA4 Putative uncharacterized protein n=1 Tax=Campylobacter lari RM2100 RepID=B9KFA4_CAMLR Length = 794 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 37/268 (13%), Positives = 93/268 (34%), Gaps = 34/268 (12%) Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 ++ + + ++E + + ++ A I E + A + + + ++D Sbjct: 361 EFFQNFIEELLV---DSEEELVIKIKEELAFIKELVRA---HELSFCQILELFFMQIDGI 414 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF--DLMSQKPKRGDR 706 ++S G V + L+ R + + V ++ ND P++++ F + + +K Sbjct: 415 KLSSV-GGGEVTVMGLLESRGLRYDGVIIVDFNDEFIPKRVSSELFLNNEIRKKAGLITH 473 Query: 707 SRRDD-DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL-------------- 751 ++R++ R+ + + A+ + G S +N E+ S + EL Sbjct: 474 TQRENLQRHYYYTLMAKAK------FAGISYVENEEKIKSRFLDELEFFLVEDKIYSDNA 527 Query: 752 -IDYIGQSHYLPGDEALNCDESEARVKAHLTC---LHTRMPFDPQNYQPGERQSYAREWL 807 I Y ++ + + ++E H + + Y + L Sbjct: 528 YIKYFQENECKFNLDPITHIKAEHDYFKKALTFSRFHILINYGLDYYYKYVLGLKEPKIL 587 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPLE 835 +A + S + L + L Sbjct: 588 DNNLKANELGSFIHKALEEYYNQNKSLN 615 >UniRef50_UPI0001B43F60 UvrD/REP helicase n=1 Tax=Listeria monocytogenes FSL J2-064 RepID=UPI0001B43F60 Length = 319 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 59/153 (38%), Gaps = 17/153 (11%) Query: 602 DAETEAAMTLIEQ--QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 D E + + + + +I + A L++E+A +L + + V Sbjct: 179 DEEKDWLLKEVSNVKTLKELILKYKAA--------RTLKEEMADKLREYDNNNY---NAV 227 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYP--RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 + T+ + + +K V + G+ P R + +L + + ++ R L Sbjct: 228 YLLTIHSSKGLGYKNVFVKGIYKNSLPDYRSVDKESIELQPLIEQASPPTTMEEQRRLMY 287 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 AL A++ LY++Y ++ S ++E Sbjct: 288 VALTRAKENLYVTYP--REINDKPTLVSPFIKE 318 >UniRef50_Q043G6 ATP-dependent helicase/nuclease subunit A n=25 Tax=Lactobacillus RepID=ADDA_LACGA Length = 1204 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 74/548 (13%), Positives = 156/548 (28%), Gaps = 121/548 (22%) Query: 385 EVEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 EV+++ R+ + E+ L DI ++ +Q F A Sbjct: 540 EVQMVIARIKQLKAENFQVWDRRTQLKRPLEYSDIAIITRTRSDNLQVMQE-FAKAD--- 595 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 LP ++D + L ++ L L D+ ++A++ P+ F+ E L + Sbjct: 596 -LPLFVTDAQNYFQTFELIMIMNYLRLIDNPQQDIPLVAVMRSPL----FNFKEPELAQI 650 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R ++ PA +T Sbjct: 651 R-------------------VKTPAGNFYT-------------------------ALTSF 666 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 + + + L L QL R A + E + + L Sbjct: 667 ASVNSSLGKKCKEFLQQLETLR-SFAATHRISELIWSIYE--KTHLLEIVTGLPNGQQRR 723 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-----AGPVNICTLMPMR 668 +++ + L + + ++ + L V + T+ + Sbjct: 724 VNLESLYERATSYESAGFKGLYQFISFIERMRKNQKDLAQPLLSDKADNAVKLMTIHASK 783 Query: 669 SIPFKVVCLLGMND--------GVYPRQLAPLGFDLMSQKPK-------RGDRSRR---- 709 + F +V ++G+ G + LG + + + D +R Sbjct: 784 GLEFPIVFVMGLGHQYQTRDLSGNFTISQNELGLTIKEKNYRIDSLVKSLADVQKRQQML 843 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 +++ + L AQQKL + + +N + V EL + +P + +N Sbjct: 844 EEEARILYVGLTRAQQKLILV-ASVNEIENKRKK---WVSELD---QKKDIIPLVKKINA 896 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQPGERQS---YAREWLPAASQAGKAHSEFVQPLPF 826 + L H E Q Y + L + K +E Q + Sbjct: 897 QSPLDFLGPKLEQKHEFDQTIRDMTSALEEQDKLYYLKFNLDLEPEKIKDQNEDSQEVNS 956 Query: 827 TLPETV--------------------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 + + V + +++ + P+ + ++ + D Sbjct: 957 NVNKVVKELYNFKYPFEDATKTTAYQSVSEIKKAFNDPIDTELENSRLISSSNRYLQPID 1016 Query: 867 TEPFILEG 874 P LEG Sbjct: 1017 ETPTFLEG 1024 >UniRef50_C2UN36 ATP-dependent DNA helicase, UvrD/REP n=3 Tax=Bacillus cereus RepID=C2UN36_BACCE Length = 719 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 48/360 (13%), Positives = 110/360 (30%), Gaps = 64/360 (17%) Query: 401 PTLTPRDIIVMVADIDSYSPFIQA-VFGSAPADRYLPY-AISDRRARQSHPVLEAFISLL 458 T +DI V+ ++ V +PY ++ + + I L Sbjct: 412 ETRQFKDIAVLYRTHAVSRAIVEQLVLND------IPYIQYGNKDTFYENTYVRPIIGFL 465 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDIT----EEGLRYLRQWVNESGIRWGIDDDNVREL 514 L + E + + +V ++ I+ L Y+ V + + Sbjct: 466 RLALNPTDEEAIKEICNVLYISKEKAISHINRASALDYIDGKVKPLLYYLTSIPELKKYQ 525 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 G GL R+ A+E + + Y +++ Sbjct: 526 LQFIIGVIKNLKGLARLNPDLAVEEIRHGYIGYEKYLQNN-------------------- 565 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 + L + +++L+ + D V L Sbjct: 566 -----KRGSLTIHQELVKEVLDELTASSK--------------KFKDIASFLNFIDKVIL 606 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL-- 692 +++++ + Q V + T+ + + F V +G+++GV P + A Sbjct: 607 R------NKQMEELQKQQNP--DAVALHTIHSSKGLEFPTVFFIGVSEGVLPHKSALEVM 658 Query: 693 GFDLMSQKPKRGDRSR-RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 + ++K +++R L + A+ +L+IS + N S ++E+ Sbjct: 659 EDRITNKKEMLMKLQESLEEERRLAYVGITRAESELFISSPK--VVRNQSCEISRFIKEV 716 >UniRef50_Q13F63 Putative uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=Q13F63_RHOPS Length = 886 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 68/385 (17%), Positives = 122/385 (31%), Gaps = 44/385 (11%) Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLM---QLNIW------RRGLAQERPLEE 586 A+ +A G+ + L + GL E V L +LL L L E Sbjct: 269 ALTTADGQAAAALAEVLAKGLSQERVRRLFALLRGSPALERIPREWTRLLPLGAPLTEME 328 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTL-IEQQWQAIIAEGLGAQ--YGDAVPLSLLRDELAQ 643 + A P+ + +A+ L + + +A VPLSL R L + Sbjct: 329 RWERVFARVEASDWPEGQDLSALVLEVLRLLDRGLAAATDVGEALLTGVPLSLWRRSLRE 388 Query: 644 R--------LDQERISQRF-LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 L + R A V C+ + + S P V LLGMN G +PR+++ Sbjct: 389 GPPAALPVTLGRLRTPDALEPAASVIWCSAIDLASSPRPHVWLLGMNAGRWPRRISEDRL 448 Query: 695 --DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 + + + D D+ F L +A + + +S+ R R S L++ Sbjct: 449 IPNHVLPIEELDPLPIADGDKRDFGTILATATE-VAMSHSRRDAG-GRLRGRSPLIKSFA 506 Query: 753 DYIGQSHYLPGDEALNCDE--SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 P A D + A L + + + G Sbjct: 507 VTYLDRGRTPEHAASEADRLLACPAEFAKLPVAVSGIGCWRDWFSGG------------L 554 Query: 811 SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 + + + ++ +L+ P+R ++ + EP Sbjct: 555 TAHDGLVAANHPRITKLFERSLSATSLKLLLRDPIRFVWRYGFRWTAPE-----DADEPL 609 Query: 871 ILEGLSRYQINQQLLNALVEQDDAE 895 L+GL+ + +L V+ Sbjct: 610 TLDGLAFGNLVHAVLQNAVDGLSEA 634 >UniRef50_B4WUE6 UvrD/REP helicase domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WUE6_9SYNE Length = 700 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 59/159 (37%), Gaps = 21/159 (13%) Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV-----PLSLLRDELAQRLDQERI--SQR 653 P + + + + EGL L ++ L + + +I + Sbjct: 542 PAKTQAQQWKYVAGEIKRMKKEGLDLAEMAIFSRTNADLQTIQAALTRNKVKSQIIAREG 601 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 V + TL + + FK V ++ ++D P++ L + ++ + +R Sbjct: 602 ANGDGVRLGTLHRAKGLEFKSVFVVNVSDEQVPQRS-----LLQDVQDQQLRSDLLERER 656 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 L L A+ + ++++G +PS +++++ Sbjct: 657 QLLYVGLTRARDEAILTWVG---------YPSRFLEDIL 686 >UniRef50_B7RVB6 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RVB6_9GAMM Length = 869 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 87/684 (12%), Positives = 181/684 (26%), Gaps = 137/684 (20%) Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 D +L + +N + + + +++I Q+E+ + ++D Sbjct: 168 DFDDLSPLQRSCIN--HLASAVQELASAAGEATIQARSYADRQQELSAIARWAAQEYQDD 225 Query: 401 PTLTPRDIIV--MVADIDSYSPFIQAVFGSAPADRY-LPYAISDRRARQSHPVLEAFISL 457 P + I++ M D ++ F S LP S PV+ + + Sbjct: 226 PDCSLG-ILLADMNGDRAPLEFLMRREFDSLGDKYNSLPVNFSTGITLDRAPVIRDALRI 284 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 LS+ D+L L++ D E + + +++ L Sbjct: 285 LSVCGETLPMTDLLGLVNSRFT----DCNEADSDRVVRLLHQ----------------LF 324 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 G+ G R L + S L + + Sbjct: 325 DDGEEQLNLGRLRFLSRSVKAGGEQGLAMGERLASCSELRLQRL---------------- 368 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAE--TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 + +W+ D+L + P +E ++A+ V Sbjct: 369 ---TQRPSDWVKSICDVLGVWAWPGEGPLDSLEFQQVEAWYKALQEFSGLDSLAGRVNFH 425 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 L + + + + + +PF + G+ +P P F Sbjct: 426 TALGMLKRCCQNRISQPQTADSGIQVLGPLEAAGLPFDSIWFCGLQGNRWPAPSRPNPFI 485 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALI----SAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 M+ + K + + + L +A + SY + D + PS L+ Sbjct: 486 PMALQRKHDMPHSSSEREWNYASTLTDQYRAACDRFIASYSRQ--LDGAPEVPSPLLGAF 543 Query: 752 -IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 ++++ + +P +WL A Sbjct: 544 PLEHMEATVLIPE-----------------------------------------QWLAQA 562 Query: 811 SQAGKAHSEFVQPLPFTLPETVPLET-----LQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 A P + LQ+ P RAF RL + + Sbjct: 563 -SASSLEQNLNAQAPMVSKSEMSHIRGGSGILQQQANCPFRAFASKRLLLEPLGDYRA-- 619 Query: 866 DTEPFILEGLSRYQINQQLL---------NALVEQDDAERLFRR-----FRAAGDLPYGA 911 L R I L +A + E L + A +P Sbjct: 620 -----GLSAADRGSILHDALYVLWGEINDSAALHALGREALDEKIASASAAAINAVPESV 674 Query: 912 ---FGEIFWETQCQEMQQLADRVIACRQPGQS-------MEIDLACNGVQIT---GWLPQ 958 G + + Q +Q+L + + ID + ++ + + Sbjct: 675 RLLVGMHCLDLESQRLQKLMTQWVQLELARNPFKVVAREEPIDFKLGELSLSLRVDRVDE 734 Query: 959 VQPDGLLRWRPSLLSVAQGMQLWL 982 ++ + + + WL Sbjct: 735 LEDGSRIVIDYKSGRSS--LADWL 756 >UniRef50_D1AA51 UvrD/REP helicase n=5 Tax=Actinomycetales RepID=D1AA51_THECD Length = 708 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 73/227 (32%), Gaps = 42/227 (18%) Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 R+ L Y W + + E V L + L +R L RP+ Sbjct: 515 RLRLNYRSTQEILTWA-------AGIMTGERVEALDEGIDTLADYRSRLRGSRPV----- 562 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG-AQYGDAVPLSLLRDELAQRLDQE 648 + + + ++ + + G+ + A A RL Sbjct: 563 ---------LVSAGTQPEELDALVEKVRQWLEAGVEPSDIAVAARFREFGSRAADRLKDA 613 Query: 649 RISQRFLAGP-------VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 I L V I T+ M+ + F+ V ++G+ + P Q A ++ Sbjct: 614 GIPVVLLKDGPDPSAEGVRIATMHAMKGLEFRCVAVIGVTERALPLQAAVTP----AEID 669 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 + +R L A A+++LY+S+ G PS L+ Sbjct: 670 RVQHEIDMLAERSLLFVACTRAREELYVSWHGT---------PSPLL 707 >UniRef50_B8IZF9 UvrD/REP helicase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IZF9_DESDA Length = 1173 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 61/363 (16%), Positives = 110/363 (30%), Gaps = 81/363 (22%) Query: 387 EVLHDRLLAMLEED--PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E + DRL +L +D P D++V+V D A +P + Sbjct: 564 EAVFDRLGRILLDDVAPQRPWSDVLVLVRSNDG-----AARIADHLVRLGIPVITENSLL 618 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 +HP++ ++LL+ DS + +L +L + Sbjct: 619 LSAHPLIVQTVALLAFLDSPDDNIALLTVLTGEIFH------------------------ 654 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA-QGEWQSVL-PYDESSGLIAELVG 562 + EL T H W + L + WQS+L P+ SGL+ Sbjct: 655 ----GHPEAAELAHTDLHGWCARQKKGFLYQSFRQRWPHVWQSLLAPFFSQSGLMTP--- 707 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 + W L E+ E R + + + A Sbjct: 708 -----YDTVLEWYARLQVEQRFPEAATFLRRFMEVLHSAEEKGLAT-------------- 748 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL----L 678 LS + + +E++ V + T+ + + VV + L Sbjct: 749 -----------LSTFLEHWNAKSQEEKVPMPENMNAVRVMTVHKSKGLEAPVVFVPFTAL 797 Query: 679 GMNDGVYPRQLAPLGFDLMSQ------KPKRGDRSRRDDDRY-LFLEALISAQQKLYISY 731 ++ P + G +M + +P D +R+ + L A A+ LYI Sbjct: 798 NISASDKPLRTNRQGLSMMVRNQKALGRPYYEDLARQARESLNLLYVAFTRARDALYIFR 857 Query: 732 IGR 734 Sbjct: 858 TSA 860 >UniRef50_B2IL96 UvrD/REP helicase n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IL96_BEII9 Length = 730 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 46/378 (12%), Positives = 99/378 (26%), Gaps = 94/378 (24%) Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 H E++ H + ++ ++ + F F +PY Sbjct: 409 EAHGIVEEIKKRHAE---------GVDFAEMAILYRN-----NFFSRGFEECLVRAKIPY 454 Query: 438 AISDRRARQSHPVLEAFISLLSL---PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 I ++ ++ L + PD R E + +++ P R ++ + L Sbjct: 455 VIVGDVGFYQRAEIKDTLAFLRIATTPDDRQSDEALRRVINEP----RRGFGKKAMAILE 510 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 E+ R A T + L + + L + Sbjct: 511 ---EEANFRH--------LSLFRAIETATLSSACRKAGLMFVAAIEKVAKDPSLTLADQL 559 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 L+ + G +R L + + Sbjct: 560 SLLLDATG-----------YRAMLQASK-----------------------AEDGKARLE 585 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 ++ + L G + + TL + + F+ Sbjct: 586 NISELLHLAG--------SFHDAHELLDHAALASSRPNENEEGRLKLMTLHKSKGLEFEH 637 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V L G DG++P + D++R L A+ A+++ I+Y Sbjct: 638 VFLPGWEDGIFPAGNSD-----------------LDEERRLAYVAITRAKRRAAITYCEY 680 Query: 735 SIQDNSERFPSVLVQELI 752 + PS + ++ Sbjct: 681 --RRGLA-DPSSFIADIP 695 >UniRef50_A8SI11 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SI11_9FIRM Length = 1228 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 61/382 (15%), Positives = 110/382 (28%), Gaps = 74/382 (19%) Query: 389 LHDRLLAMLEEDPTLT---------PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 + +R+ ++ + D V++A + +++A R +P Sbjct: 567 IAERIAQLVSAGEPVREGSTTRPVRYEDCCVLLAARTEFPAYVEA-----LTARGIPVYA 621 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 R P + I+LL + D S+D+ L +L F TE+ L LR Sbjct: 622 DARENLMLAPHIRPLIALLKVIDDP--SQDI--YLAAAMLGPMFGFTEDDLVRLR----- 672 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 + R L LL + A + Sbjct: 673 ----------ARSRQVQAEPDKKPARISLYGALLLALEDPADDPF--------------- 707 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 + L R+ +A+ P E+ L A + + A Sbjct: 708 -TEKVKDFYAHLTALRQ-MARSAPAEQLLEEIFASTGYLAALGVLENGARRREDARRFAS 765 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 GA A+ ++ A Q+ + G V+I T+ + + F VV + G Sbjct: 766 FCATSGAGGISALVRAIDAAAQAGSTGQDTVPSGVHPGCVSIMTIHRSKGLQFPVVFV-G 824 Query: 680 MNDGVYPRQLAPLGFDL-------MSQKPKRG----------------DRSRRDDDRYLF 716 + + + +P+ G R R + L Sbjct: 825 DTARKFNASDIRQPVLVHRTFGAGLRLRPENGEGAYKTAAYTALANVHARELRSEQMRLL 884 Query: 717 LEALISAQQKLYISYIGRSIQD 738 AL AQ KL ++ S + Sbjct: 885 YVALTRAQDKLILTVPMSSGKS 906 >UniRef50_Q1NRJ1 UvrD/REP helicase n=3 Tax=Deltaproteobacteria RepID=Q1NRJ1_9DELT Length = 775 Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 87/280 (31%), Gaps = 40/280 (14%) Query: 508 DDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE-SSGLIAELVGH-LA 565 + L L G T + R+ L +E G P D + L A G Sbjct: 435 SWHRLLLLLDKIGPKTAARIIDRLPL---LEQVAGPGDGQRPLDGSLAALKAFPAGKAWG 491 Query: 566 SLLMQLNIWRRG-----LAQERPLEEWLPVCRDMLNAFFLPD-AETEAAMTLIEQQWQAI 619 + +L LA LE+ L + +L + D + + + Sbjct: 492 EGMQKLLQLLADINDPGLAPAELLEQVLIYYQPLLRRLYPDDYPRRQRDLEQLRPLLAGY 551 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 + ELA + G + + T+ + + ++ V ++ Sbjct: 552 ------------ESMDDFLAELALDPSSPEVDDD-GGGRLVLSTVHSAKGLEWEAVFVIH 598 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI-QD 738 + +G +P A ++ +++R L A A++ LY+ Y +S D Sbjct: 599 LAEGKFPANQAVGA-------------AQYEEERRLLYVAATRAKRWLYLVYPRQSTGAD 645 Query: 739 NSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 PS + L + + G+ A D A Sbjct: 646 RRPLFCEPSPFLAPLPPELLRGSGSGGEAAGRPDWPSAPP 685 >UniRef50_C5DEJ8 KLTH0C09856p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DEJ8_LACTC Length = 713 Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 65/498 (13%), Positives = 146/498 (29%), Gaps = 96/498 (19%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG--RDYI 311 P+ LL + + ++ + + + G+P + +G LG R I Sbjct: 212 PSMTNGLLHKYKVVIVDEYQDLFPSLGPFLSAISQNKQLFLFGDPHQSIYGFLGDNRSVI 271 Query: 312 YLLSDLESSQELDAF--VDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD--NKRPL 367 L + + L F D +I N V+ + + +K P+ Sbjct: 272 RFLESMRPPENLKVFHLYDNFRST------PEITRWANAVAGDVSRAVTNNNAFFSKEPM 325 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 S + P E+E++ D++ ++ ++ DI V+ ++AV G Sbjct: 326 GIEPSLVDI---ADPLEELEIITDKICQLVSN--SVKLSDIAVLTRTNAQ----LKAV-G 375 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + +P + P S + ++ LL +L Sbjct: 376 DHFSSYGIP-----TEKLTAQPDWI----------SDKNIKFLVDLLKTCML-------- 412 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELEL--PATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 + +++V +G + + + + + L G A ++ W Sbjct: 413 --VSREKRFVEGAG-------QHQSDFSVIVTLSSLKGVSNQSIQTLFGEAQKANISLWN 463 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN-----AFFL 600 + + + S + L L +PL + + ++ F Sbjct: 464 FISQSRQ-WPTGVSNRTRIESFVRHLEPLLEYLESSQPLTA-ISIISRLVTVSHQIGFKP 521 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDA--VPLSL-LRDELAQRLDQ------ERIS 651 + + E + + + ++ V L+ + + S Sbjct: 522 DEIKNENDLEIFREHLIEMLGVLKLCSSTRPQNVSLTEWFLETWMDQHSSFIQHAANERS 581 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 G V I T+ + + F VV L G ++ +P Sbjct: 582 NIHDLGAVKISTIHSSKGLEFPVVFLSGSSNSNFP------------------------I 617 Query: 712 DRYLFLEALISAQQKLYI 729 ++ + A+ LY+ Sbjct: 618 EKNALYVGMTRARNLLYM 635 >UniRef50_C6CTT6 Recombination helicase AddA n=2 Tax=Firmicutes RepID=C6CTT6_PAESJ Length = 1277 Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 49/422 (11%), Positives = 105/422 (24%), Gaps = 93/422 (22%) Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED---- 400 E + P + + Q E ++ ++ ++L+E Sbjct: 544 NEEDGAVSPADSDDESEQGAGPAAESAEELQ-----TAQLEARLIARQIRSLLDEGFRVY 598 Query: 401 -------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 + RDI++++ +++P I +P +E Sbjct: 599 DGKKRESRPMEWRDIVILLRATQAWAPVI----IEELQGAGIPAYAELSSGYFDATEVET 654 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 +SLL + D+ + + L P+ F + E L +R Sbjct: 655 ILSLLRVIDNPYQDIPLAGTLRSPI----FGLNAEELALIR------------------- 691 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 + +VL L EL L+ L +L+ Sbjct: 692 ----------------------IGAMQDTYYDAVLQAAGDLLLPDELRRKLSLFLERLDR 729 Query: 574 WRRGLAQERPLEE--WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 WR Q L + W F + + + Sbjct: 730 WRNDARQ-GSLADLIWSIYRETGYYDFAGGLPGGVQRQANLR-ALHDRARQYEATSFRGL 787 Query: 632 VPLSLLRDELAQRLDQERIS--QRFLAGPVNICTLMPMRSIPFKVVCLLGM----NDGVY 685 + + + V I ++ + + F VV + G+ N Sbjct: 788 FRFLRFVERMRDSGGDLGTARALGEQENVVRIMSIHKSKGLEFPVVFVAGLGKNFNQQDL 847 Query: 686 ------------------PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 P + +R ++ + AL ++K+ Sbjct: 848 RSAFLKHKQLGFGPKYIDPEKRVSYPTLPFLSIRRRMRMEMLAEEMRILYVALTRPKEKM 907 Query: 728 YI 729 ++ Sbjct: 908 FL 909 >UniRef50_A9VDB1 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9VDB1_MONBE Length = 675 Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 54/378 (14%), Positives = 114/378 (30%), Gaps = 67/378 (17%) Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT-----L 403 + + K+ + S Q E+ ++ + + L Sbjct: 161 QQLSSDASQSDSQGTKQATQEQGPDVCLTTYPSLQEELSG----IVQIFSQTANRAKTSL 216 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 D +++ + + +LPY ++ + Sbjct: 217 RYSDFAILLR---TNATLCNV--EQELKIHHLPYRLAGKT-------------------G 252 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 F S++V LL L ++ + + GI + +L+ A Q T Sbjct: 253 PFQSQEVGDLLAYLRLINDRSDDDDAFKRICN-----RPSRGIGVQTLNKLDNLAKEQKT 307 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 F + + P + LIAEL G L + +L+ + + + +E Sbjct: 308 SLF-------------SAAATSQLKPAKSFADLIAELRGRLGNF-KELSEYIQMVIKEIK 353 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP-LSLLRDELA 642 EE + A D E T + + +I Q + D++ Sbjct: 354 FEEHVK---KTCKAAKTDDEHGENDFTRRWKNVELLIDCATSTQQQQCQQHGAKASDDVE 410 Query: 643 QRLDQERISQRFL-AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 + + I+ + + + T+ + + + VV + +ND YP Sbjct: 411 RSIQDLLINFVERYSDGITVSTVHKAKGLEWAVVAVPDVNDHNYPHINTQHD-------- 462 Query: 702 KRGDRSRRDDDRYLFLEA 719 GD + D++R L + Sbjct: 463 --GDDAGVDEERRLLYQT 478 >UniRef50_Q1GX41 UvrD/REP helicase n=1 Tax=Sphingopyxis alaskensis RepID=Q1GX41_SPHAL Length = 1112 Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 62/217 (28%), Gaps = 14/217 (6%) Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 + S E + L + L+ + WL D L + Sbjct: 641 SLLATASTLTGMSPTGGEALEQLGLQMAGLDQFTPAFEVAAS---WLLDRSDYLRDLAVA 697 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD------ELAQRLDQERISQRFL 655 + + + + G + + LA D + Sbjct: 698 PDASGSLSRAALLALLGFLDQ--RELGGQPLTPARALKRMRSTVLLADDRDLRDATLGAD 755 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS-RRDDDRY 714 A V + T+ + + F V ++G++D P L + R +++ Sbjct: 756 ADAVRLMTIHGAKGLEFPAVHVVGLHDQCLPGAFRRDDSPLPPGLVEPETREGHLEEEEC 815 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 LF A+ A+ L + + + R PS + L Sbjct: 816 LFFVAISRAEDHLRLYHSELANVRG--RKPSPFLGRL 850 >UniRef50_Q1Q4K9 Similar to ATP-dependent DNA helicase subunit AddA n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4K9_9BACT Length = 1198 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 47/467 (10%), Positives = 132/467 (28%), Gaps = 100/467 (21%) Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 L +DI +++ P++++ + +P+ + + + F++LL + Sbjct: 589 LKYKDIALLLRSFTQIRPYVES-----FKEHDIPFIAEGEKYFYTTQEVIDFMNLLRTIE 643 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + + + ++ L P +T+ + L Sbjct: 644 NPYDTIALVGTLRSPF----AGLTDNEIYLL----------------------------- 670 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 ++ + A +G S L + N+ R + Sbjct: 671 ----------------KINDLLDYRKTISDNIDIDA-TIGDFYSFLRKYNVRSRIIPVSH 713 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 + E + + F + + + + L + + Sbjct: 714 LISEIIN------DPRFAGITASAWQGEQKLANLKKFYRTACKLEQIQGISLKHFINNMK 767 Query: 643 QRLDQERISQRFLA-----GPVNICTLMPMRSIPFKVVCLLG------------MNDGVY 685 + +D+ R V I T+ + + F VV +LG ++ + Sbjct: 768 KYIDEAREEGESPLSDETLDVVKILTIHKSKGLEFPVV-ILGNLHGEAKKENETLDSVAF 826 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRR-----------DDDRYLFLEALISAQQKLYISYIGR 734 + G L + + + ++++ + A+ A+++L ++ Sbjct: 827 DWNTSTTGIVLGKGEQQLRNLQSIILENKINERTWEEEKRVLYVAMTRAKERLILT---G 883 Query: 735 SIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 +++DN + + ++++ L D S + + + + + Sbjct: 884 ALKDNDKSYIGLIMKSLSDAYDISLNNEPETPSGHVRKIVFGNSEIFLENFNYTGARRFV 943 Query: 795 QPG-------ERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPL 834 + S+ R W + + P L E + Sbjct: 944 SKTAEKTWDIDWNSFVRIWNDRKQSMFAETEKPLFTSPSALSEEISP 990 >UniRef50_A1VVB9 UvrD/REP helicase n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VVB9_POLNA Length = 619 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 60/180 (33%), Gaps = 34/180 (18%) Query: 581 ERPLEEWLPVCRDMLNAFFLPDA---ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 + +W R ++ + ++ I+A L + VPL+ Sbjct: 446 AKSFSDWKAFIRTGGSSMVVDGVVQLLGSYTEDKYSKKMLEIVAGVLTPPINENVPLNKA 505 Query: 638 RDELAQRLDQERISQRFLAGP-------VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 ++ RL+ R + V + T + + F +V ++G + +P + Sbjct: 506 QEHFECRLNTIRAAMERPKTKEDEAGKPVVLMTAHGSKGLEFDMVWIVGAEEDTFPDKA- 564 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 S ++R LF A+ A++ L+IS G+ S V E Sbjct: 565 ----------------SSVQEERRLFYVAMTRARKHLWISASGK-------LDVSRFVFE 601 >UniRef50_B5RSV7 DEHA2A13530p n=2 Tax=Debaryomyces hansenii RepID=B5RSV7_DEBHA Length = 858 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 69/489 (14%), Positives = 150/489 (30%), Gaps = 74/489 (15%) Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDI-------LELENRAVAGVNIEEFSRS 361 D +L + +Q + F+ P+ L+H IQ +I L + I Sbjct: 303 DMKHLTIAGDPNQSIYEFLGSKPE-LIHKIQDEIPGGEVTQLSINESFRITPEILNAVTE 361 Query: 362 DNKRPLDPLD-----SSIT------FHVCH-SPQREVEVLHDRLLAMLEEDPTL-TPRDI 408 +P D SI H S + E + + ++ E L P D Sbjct: 362 ICLKPAGLFDPAQELRSIRGHGHKPIISMHISNKDEYAFIASEVTRLICESGGLLNPSDF 421 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL----PDSR 464 ++ I+ + + A + + +L++ P S Sbjct: 422 AILTRSNKE----IEEISKFLTETYNIKCNRFSSSASWIKSKVHILLDILNVISKGPSSD 477 Query: 465 FVSEDVLALLD-----VPVLAARFDITEEG-----LRYLRQWVNESGIRW--GIDDDNVR 512 F V+++LD ++ F+++ + L + E I +D Sbjct: 478 FGLLCVISILDRKFGSSSRVSKLFNVSNKWKVNGGLETRENALEEYIIHELEFLDIQVEE 537 Query: 513 ELELPATGQHTW----------RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 + + ++ + L M+S + + ++ + S ++ Sbjct: 538 NQVTVKKKKKSLHDITDIYKIPKYNNEILRLKTFMDSIRSVRRDLIQNTQESQNPTNILS 597 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L +L + L + D ++ + + ++ + Q + + Sbjct: 598 SLLRVLSD-SELLEYLNSPELSKSRSTKQPDSID----IEKDYKSLLKTYLQSFNKSLKY 652 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP--VNICTLMPMRSIPFKVVCLLGM 680 Y + L+ + + + VN+ T+ + + F VV + G Sbjct: 653 SYEC-YMEQNSLTKSEKSFVEYFLRSYNDEIPTMDREMVNLSTVHTAKGLEFPVVFIAGA 711 Query: 681 NDGVYPRQLAPLGF--DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 P+ F L+ + + +S+ LF A A+ LYI G + + Sbjct: 712 -----PQNAKSSSFWDSLLLDRLEPHAQSKA----RLFYVACTRARNLLYI---GTNKRF 759 Query: 739 NSERFPSVL 747 + PS Sbjct: 760 D-TLSPSAF 767 >UniRef50_A3GIE1 ATP-dependent DNA helicase HMI1, mitochondrial n=2 Tax=Pichia stipitis RepID=A3GIE1_PICST Length = 864 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 54/371 (14%), Positives = 111/371 (29%), Gaps = 50/371 (13%) Query: 381 SPQREVEVLHDRLLAMLEEDPTL-TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 S E + + + ++ E L P D +++ IQA+ + Sbjct: 416 SASEECDFMVGEITRLIFESGGLLRPSDFLILTRTNKE----IQAIEDQLRDSYGMKSNK 471 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 + A + + + +L++ S+ ALL V + + L L ++ Sbjct: 472 FSQNATWASSKVHVLLDILNVLKKGPGSD--FALLCVLLRLDKRPGGRLRLSKLFNIYDQ 529 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 IR + ++ R L + ++++G QS + G Sbjct: 530 WRIR-------------NSLTSNSNLEDFVRSDLEQSNKTSKGVVQSKIFSIYKLGDNRT 576 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN-------------------AFFL 600 + L++ L + R+ LA + L +++ Sbjct: 577 TLDLLSTFLSSVREMRQNLAVHQTPMAILESLLNIMEKSTLLEYLNSPETSGTGKAQKLS 636 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL--DQERISQRFLAGP 658 + + EA +E + Y V + + + Sbjct: 637 IEEQIEAHRIRLESSLSTFYNSL-RSSYTRYVDTNSFNETFLEFFLKTYNDHVTILNEDM 695 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 +N+ T+ + + F VV + G N + + L + D R LF Sbjct: 696 INLSTIHMAKGLEFPVVFVPG-NSSAF--GTSQNWSSLFTDGIVAQDSKAR-----LFYV 747 Query: 719 ALISAQQKLYI 729 A A+ LYI Sbjct: 748 ACTRAKSLLYI 758 >UniRef50_C6IZE1 Recombination helicase AddA n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZE1_9BACL Length = 1341 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 67/437 (15%), Positives = 128/437 (29%), Gaps = 106/437 (24%) Query: 383 QREVEVLHDRLLAMLEED-PTLT-------------PRDIIVMVADIDSYSP-FIQAVFG 427 + E + R+ ML E L RD+++++ +++P I+ Sbjct: 577 RLEARAIAARIRGMLGEGGEPLRIYDKQLQAMRPVAFRDMVILLRSTLTWAPAMIEE--- 633 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 +P + +E +SLL + D+ + A+L P+ +D +E Sbjct: 634 --LRVEGIPAYGELSQGYFQASEVETMLSLLQVIDNPLQDIPLAAVLRSPL----YDFSE 687 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA---MESAQGEW 544 E L +R L + + L R G A + ++G Sbjct: 688 EELADIR---------------------LASPSGRYYEAVLARAAAGNAESALSDSRGGD 726 Query: 545 QSVLPYDESSGLIAE------LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 E L L + L QL WR + D++ Sbjct: 727 AGEASVYHPETGQIEPSANDALALKLQAFLRQLEAWRS--------MARVGQLGDLIREI 778 Query: 599 FLPDAETEAAM-----TLIEQQWQAIIAEGLGAQYGDAVP-LSLLRDELAQRLDQ----- 647 + E T + QA++ + + P L + + + Sbjct: 779 YRETGYLEWVGGLPGGTQRQSNLQALLDRARQYEVSSSAPGLFRFLRYVTRLRENGGDLG 838 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK------- 700 V I T+ + + F VV + G++ + RQ F LM ++ Sbjct: 839 APGDAGEQGDGVRIMTIHKSKGLEFPVVFVAGLS-KQFNRQDLNAPF-LMHKELGFGPKY 896 Query: 701 -----------------PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS-----IQD 738 +R ++ + AL + KL + ++ Sbjct: 897 VDANTRVSYPTLPNLAIRRRAQMELLAEEMRVLYVALTRPKDKLVLVSSVKNLTKSVEAW 956 Query: 739 NSERFPSVLVQELIDYI 755 S Q+L DY+ Sbjct: 957 GGALEASE--QQLPDYL 971 >UniRef50_Q21J65 DNA helicase/exodeoxyribonuclease V, subunit B n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21J65_SACD2 Length = 935 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 66/615 (10%), Positives = 153/615 (24%), Gaps = 90/615 (14%) Query: 350 VAGVNIEEFSRSDNKRPLDPLDS-SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 + + + + + P++ D S C + E+E + L ++P+ I Sbjct: 191 LQQALVTSATNNVQQLPIEKCDQASAGLIECVDWETEIETIARWAHQTLRQNPSTQ---I 247 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYL----------PYAISDRRARQSHPVLEAFISLL 458 +++ ++ + I+ F + YL PY +S P + + L Sbjct: 248 GIVIPNLQKHRSQIECAFIRQFDNDYLLNPTSSGADKPYELSIGSPLAEEPCIADALLLT 307 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 L + E+ L L+ WG + + Sbjct: 308 QLLHKKLTKEEALDLIRSEF-------------------------WGQNTEARLLALQGL 342 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 R+ + + E + L ++ E + + L + Sbjct: 343 NDWPMTSVDTIRLTELLSKAEKRIETANDLNKEQFKDGFIEATDEMTTSNRILEAIQLYR 402 Query: 579 AQERPL--EEWLPVCRDMLNAFFLPDAE--TEAAMTLIEQ---QWQAIIAEGLGAQYGDA 631 L + W + L P +EQ ++ + + Sbjct: 403 LAAHKLDFQHWNGFLKRFLKTLNWPGNRTLNSREYQAVEQFKLILDELLVDQRCFIGSNL 462 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 V L QRL ++ Q+ P+ I + + F + +P P Sbjct: 463 VTFPAYVAHLRQRLSEKVFQQQTPRKPIQISGTLEAIGLSFDKCWVANTTRSQFPESPQP 522 Query: 692 LGFDLMSQK----PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 F ++ + R + D L ++ SY + ++ + P Sbjct: 523 NAFLPLALQKAFATPRSSPQKELDYAEQLLTIFSECANEVTFSYSKTAEDEHQQVSP--- 579 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 + L+ ++ + + S Sbjct: 580 ----------LLPPMASKKLDEEQLAKNL----------------YFDKYNTAS----AY 609 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 S ++ ++ + L + +P+ A+ RL Sbjct: 610 RNFSVFSDLCGLPLKHSEASIKIRRGVNALSTYAVNPLYAYLVHRLGAKQPNPV------ 663 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 + R I +L E + + + E+ + Sbjct: 664 -YVGISPPQRGNILHNVLETFWEATKNSAALKTKLENQAAFLAELEALISDNVNAELHKH 722 Query: 928 ADRVIACRQPGQSME 942 + + Sbjct: 723 LQYLPPQLLELEKER 737 >UniRef50_B3WEJ1 ATP-dependent helicase/nuclease subunit A n=8 Tax=Lactobacillus RepID=ADDA_LACCB Length = 1234 Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 51/433 (11%), Positives = 121/433 (27%), Gaps = 81/433 (18%) Query: 383 QREVEVLHD----RLLAMLEED-PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 E++ L + +L ++ + RDI ++ + IQ F +A +P Sbjct: 560 LAEIQRLINDPDAQLWDRQAQEYRRIHYRDITLLTRQTSQ-NSLIQTQFAAAG----VPL 614 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 ++D + L ++LL + D++ ++A+L P++ ++ + L +R Sbjct: 615 FVADTKNFFKTTELMVMLALLKVIDNQKQDIPLVAVLRSPIV----GLSADQLALIRLAA 670 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 + A + P + Sbjct: 671 KQ-----------------------------------VPYYDAVTAFLQAEPKTPLAQRT 695 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLE-EWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 ++ L QL+ +R + + W + + Q Sbjct: 696 HDM---LTHFFNQLSHFRDLARENDLVTLLWAIYQDTGFLDYVGGTPGGSQRQANL-QAL 751 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPVNICTLMPMRSIPFKV 674 + + ++ + + V + T+ + + F V Sbjct: 752 IDRARTYEAGGFKGLFAFIHFITLMQKQDQDLAMPAQVDPDNDAVKLMTIHKSKGLEFPV 811 Query: 675 VCLLGMNDGVYPRQLA--------------------PLGFDLMSQKPKRGDR--SRRDDD 712 V L+ N + + + ++L + + R ++ Sbjct: 812 VFLMQAN-KHFNMRDQTGTAILTKQGIGIKWLDPETRVEYELPQYQAAKAARQNQTLAEE 870 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 L AL AQQ+LY+ +G ++ N V++ + + + S Sbjct: 871 MRLLYVALTRAQQRLYV--VGATMSGNQLTSADKTVEKWAAAAEGEARVLAPQVRSGATS 928 Query: 773 EARVKAHLTCLHT 785 H Sbjct: 929 YLDWIGPALIRHP 941 >UniRef50_C0CWX3 Putative uncharacterized protein n=3 Tax=Clostridium RepID=C0CWX3_9CLOT Length = 1126 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 57/175 (32%), Gaps = 34/175 (19%) Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS----------QRFLAGPV 659 + W A + A V S+ +++ L+ + + A V Sbjct: 969 QKLLDSWIADLDLTEDAAVQKLVSTSVFYKNMSEFLENLTFGRESDLKRCGKKSYTADAV 1028 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 + TL + + F VV L G G+ P + D+ +++R LF Sbjct: 1029 TLMTLHGSKGLEFPVVLLYGARKGLIPLENGNGRIDV-------------EEERRLFFVG 1075 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELID--YIGQSHYLPGDEALNCDES 772 + A+++L ++ PS + + ++ Q P + S Sbjct: 1076 MTRAKEELIVTTSP---------EPSPFLDHMPKETFLAQRANPPRETEAARQLS 1121 >UniRef50_Q7MSD4 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MSD4_WOLSU Length = 732 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 78/553 (14%), Positives = 165/553 (29%), Gaps = 92/553 (16%) Query: 450 VLEAFISL--LSLPDSRFVSEDVLALLDVPVL----AARFDITEEGLRYLRQWVNESGIR 503 ++E F+SL + L + ++ L++ R +T+E L ++ E G + Sbjct: 133 LVEGFLSLKEMELLNQVASITPLVVTLEIDGYNLDYYRRLGMTKEELERNYRYEIEWGSQ 192 Query: 504 WGIDDDNVRELE---------------LPATGQHTW-RFGLTRMLLGYAMESAQ-----G 542 + + L L HTW G+ + + + Sbjct: 193 MILSKKALPPLGSVNAYAFGSRLDQVALVLERIHTWVNEGIEPERIAIILPDERFADYLR 252 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF-FLP 601 + ++ + G SL ++ L L E P+ + L AF Sbjct: 253 LFDKERNFNYAMGERFSDSSLFLSLQKEIER-LESLPPPASLLELSPLGLEALRAFTLEL 311 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 +++ E + + Q+ ++A S + L + RI G + + Sbjct: 312 ESQGEIEASRLLQEGITLLAPLERILENRP--PSEILRLLLKEFATRRIDDV-GGGRIRV 368 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD---RYLFLE 718 ++ R + F V ++ N+G+ P+ F S + K +R + + ++ +L Sbjct: 369 MGILETRGLNFDRVVVVDFNEGLIPKPSDKDLFLNSSIRAKCHLPTRLERENLQKHYYLS 428 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 L A++ + + N + PS ++ EL I Sbjct: 429 LLRRAKESV------LAFVSNEQNEPSRMLLELQTPI----------------------- 459 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQ 838 F + Y R A + E + +P+ E LQ Sbjct: 460 ----------FSGKEL-------YERTLFGAPREHKGFVEEIIDSIPWER-ERFSHSRLQ 501 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF 898 F + +++ R + E L + + + + Q F Sbjct: 502 SFLLCKRQYYYRY-----IRGYSQREEENESAWLGKTVHRWLKES-FDPSISQKKRREHF 555 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSM----EIDLACNGVQITG 954 P T + + ++ Q + ++ G+ G Sbjct: 556 LSLLQKERFPSAKLAFEARATAKKMERFFEREKERAKEGAQPLWLEERVEFEVEGIDFVG 615 Query: 955 WLPQVQPDGLLRW 967 ++ +V G W Sbjct: 616 FIDRVDRVGEEYW 628 >UniRef50_A4CIG7 Putative uncharacterized protein n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CIG7_9FLAO Length = 911 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 75/531 (14%), Positives = 157/531 (29%), Gaps = 75/531 (14%) Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 + + I + L + E IR + V +L + H + R L Sbjct: 327 ITMSYPIRHSPMAQLFDLLLEMRIRKTAEGWRVPQLLV--LIAHPYLQSWFRSLDFEPTR 384 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 + L Y +S L A + L+ + LE+ + + Sbjct: 385 GRMYLIRENLYYADSDALEAMGLPVTVRELLLPPPGAPPSDHAKNLEDITRALKPVYQK- 443 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV-PLSLLRDELAQRLDQERISQRFLAG 657 D + Q + +I + + L LL +L ++ + L+G Sbjct: 444 -AGDPLQLEYLFHFNQLFNQLIQLTGAYPFVSDLKSLQLLYRQLLAD-EKVDFEGQPLSG 501 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD---RY 714 + + ++ R++ F V + +N+G+ P + F K + G + ++ D Y Sbjct: 502 -LQVMGMLESRNLDFDTVIITSVNEGILPSGKSNASFIPFDVKREFGMPTYKEKDAVYTY 560 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 F L A++ + + + E PS + +L Sbjct: 561 HFYRLLQRARRVVICYNTEPEVIEGGE--PSRFINQLR---------------------- 596 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPL 834 P + E + L E ++ L Sbjct: 597 -------TDPVLGPQTELAFAVPETGAERPGELRIHKG-----PELLERLQEMASSGFSP 644 Query: 835 ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF---ILEGLS--RYQINQQLLNA-- 887 +L RF A P+ + + L ++ E E F + + L + LN Sbjct: 645 TSLSRFIADPLLFYQRNVLGLDETEELEETVAANTFGTVLHDALEELYRPLEGAFLNRDN 704 Query: 888 -LVEQDDAERLFRRFRAAGDLPYGAFG---EIFWETQCQEMQQLADRVIACRQPGQSMEI 943 ++ ++ R L G I + Q + R + I Sbjct: 705 LAELRNRSDSAIERAFRKNYLRDGKARGKNLIALQVLRQHLDHFLGS-EVTRAEKHRIRI 763 Query: 944 ---------DLACNGVQ----ITGWLPQVQ----PDGLLRWRPSLLSVAQG 977 +LA G+Q + G + +++ ++ ++ ++ A+ Sbjct: 764 LGVEKKFRQELAVPGLQHPVTLKGTVDRIEEVDGQVRIVDYKTGKVTPAEL 814 >UniRef50_A9WPI7 ATP-dependent DNA helicase n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WPI7_RENSM Length = 1073 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 82/594 (13%), Positives = 152/594 (25%), Gaps = 94/594 (15%) Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI-SDRRARQ 446 + +R++ D RD+ V+V A FG +P I + + Sbjct: 381 FVAERIMH-FHVDRERPLRDMAVIVRTGAQV-----AAFGRYLVSHGIPVRISAAETPVR 434 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLAL-LDVPVLAARFD-ITEEGLRYLRQWVNESGIRW 504 P + + + + ++L L V +L +R ++ +R +R+ + I Sbjct: 435 DEPAVRPLLLAYRVAVTP----ELLDAELAVDLLTSRIGGLSSVQIRRVRKLLRAEEI-- 488 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 + EL GL R A+ + + G Sbjct: 489 -ANGGVRGSDEL-------LVEGLQRPAQLAALGVDGRAAARMATVLAAGSQAMTEPG-- 538 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 A+ L EW DA A ++ A Sbjct: 539 ANPQSVLWALWDATGLS---TEWATAA-------LREDANGSRADRDLDAMMALFQAAER 588 Query: 625 GAQYGDAVPLSLLRDELAQR-LDQERISQR-FLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + A + L + L + ++ R V + T + VV + G+ + Sbjct: 589 YVEQSPAASPEAFVEYLLNQELPMDTLAARAESGDAVEVMTPASAAGRQWPVVIVAGLQE 648 Query: 683 GVYPRQLAPLG----------FDLMSQKPKRGD-----RSRRDDDRYLFLEALISAQQKL 727 GV+P +L + +R R R D+ F A+ A ++L Sbjct: 649 GVWPNNRLRGELLGSQYLVEVLELGAASARRLAAVQRMRDIRYDELRSFATAISRASERL 708 Query: 728 YISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 +G S +D PS + D + D + R Sbjct: 709 I--CVGVSSEDEQ---PSGFL----DLVDPWPIEDNDGLRPLTDVRRPKTLRALVAELRQ 759 Query: 788 PFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP------------------LPFTLP 829 + + + AA + V LP Sbjct: 760 ANERGANERDSDDRAEQPAAEAARVLAELARNAVPGADPSSWWGLAPLSSTDPILPVDAV 819 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV 889 V ++ + F Q D S + + L Sbjct: 820 VPVSPSKIEAVHESALSWFLQ-------AAGGEAQLDL------ARSLGTLIHGIAQDLP 866 Query: 890 EQDDAERLFRRFRAAGD--LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSM 941 + E L LP + +++LA + G + Sbjct: 867 AGNAEELLAELANRWPALGLPENWETAAQLRRAERMLRKLAGYLRLISAQGHEL 920 >UniRef50_C6BZD0 Putative uncharacterized protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZD0_DESAD Length = 967 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 82/633 (12%), Positives = 184/633 (29%), Gaps = 101/633 (15%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + F ++ + + L + E V++ D P + ++ Sbjct: 280 LKFFEGFDRHSQLSAMREELCSQKVEG-------CAVVLPDTSLLLPVM-----HHLPEQ 327 Query: 434 YLPYAISD-RRARQSHPVLEAFISLLSLPDSR-FVSEDVLALLDVPVLAARFDITEEGLR 491 + ++ + ++EA + L + R F +D+LAL+ P L ++ LR Sbjct: 328 DINISMGYPLERSALNGLVEAVLKLQENRNGRTFYWKDILALIRHPYLKMLEVNGDQPLR 387 Query: 492 YL-RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 + QW E+ +R G +V + + + G +++ + + Sbjct: 388 TIFHQW--ENALRHGAPYADVTDFVPVYSDDN-----------GNLVDNPETTEELRSEA 434 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 + + + L+ L L L Q R W ++E Sbjct: 435 VQICIDGFKDIETLSELADSLQAMSEMLRQ-RGGTLWNRYLL-----------DSECLFR 482 Query: 611 LIEQQWQAIIAEGLGAQ-YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 L+ + + + + +G ++ S+ R L+ + + + ++ R Sbjct: 483 LMNEVIPELRESSISNEIFGQSLCFSIFRQLLSSQRVSFEPDPIS---GMQVLGMLESRL 539 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR---YLFLEALISAQQK 726 + FK +L D P + R+ + Y F ++ +++ Sbjct: 540 LNFKRTFILDTVDEKLPGTDPYDPLLPDQLRHLLDLPDSRERESVATYNFYRLIMGSEES 599 Query: 727 --LYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 Y S + + D+ S V++L+ I Q Sbjct: 600 CIFYQSGVQPGLLDSKSIR-SRFVEQLLWEIEQQRKEIITPGEEF--------------- 643 Query: 785 TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHP 844 P N+ G + A + + + + + P Sbjct: 644 ---PLKAVNFPVGA--------IVNNPAAIPKEPLQDKLENLLKFKGLSPSAIDCYVGCP 692 Query: 845 VRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL---LNALVEQDDAER----- 896 FF+ V + D F L + L LN + D + Sbjct: 693 KLFFFRYLSNVRESVTVDQDGDRAGF--GDLIHSVLKDFLEPHLNKEICGKDLDAQALQD 750 Query: 897 -LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN------- 948 R P ++ Q + + +P + +E++ Sbjct: 751 LFMLRLERDSLYP--NLAYDIKKSLEQAGKNRLALFLKSLKPTKIVELESDSQAELEMDD 808 Query: 949 -GVQITGWLPQVQPDG----LLRWRPSLLSVAQ 976 V+I G + +V +L ++ L + + Sbjct: 809 FSVRIHGRVDRVDERAGERYVLDYKTGRLHLPR 841 >UniRef50_Q2W7F4 Superfamily I DNA and RNA helicase n=2 Tax=Magnetospirillum RepID=Q2W7F4_MAGSA Length = 649 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 32/253 (12%), Positives = 70/253 (27%), Gaps = 38/253 (15%) Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 W+ G R+ G A L + ++GH + L + + P Sbjct: 402 WQLGPVRLTAGLA----------RLLSNPQDMDARAMLGHGKRVDKLLQQAPEKIDADVP 451 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 +++A P E + + AE + + + Sbjct: 452 WPALCRQVGRLVSATARPPGEEGLQWRDLAFTAADLAAECGTV--------AAFIALMEE 503 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 + R V + T+ + + + V + G + P + +P Sbjct: 504 QRRSLR-RAESGGDAVVLSTIHGAKGLEWSAVVVAGCEADLMPHESSPD----------- 551 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 +++R L A A++ L +S+ PS + E++ + + Sbjct: 552 -----LEEERRLMYVAATRAKRWLVLSFAAERR---KAVAPSPYIAEMLSGLDEDQIRYH 603 Query: 764 DEALNCDESEARV 776 D Sbjct: 604 DPQSRARLHAGPP 616 >UniRef50_B0S125 DNA helicase II n=2 Tax=Finegoldia magna RepID=B0S125_FINM2 Length = 613 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 62/166 (37%), Gaps = 12/166 (7%) Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 ++N ++ + ++ + E + D +E+ L + Sbjct: 453 SKKIDIIMNDIDYKTYIEDSVLLQNQKISLDHLVEIYKYLFKDCECYEDFINEIES-LKK 511 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + +N+ T+ + + F V ++ + DG +P + K+ + Sbjct: 512 IQKESIKHTSNLNLLTVHSAKGLEFDEVFIIDLIDGEFPTNIDSN---------KKNYEN 562 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 +++R +F A+ A+ KL + +++ E S ++++I+ Sbjct: 563 IFEEERRMFYVAMTRAKDKLTLLSPK--TRNSVEVDSSQFLKDIIE 606 >UniRef50_A8PMU2 Putative uncharacterized protein n=1 Tax=Rickettsiella grylli RepID=A8PMU2_9COXI Length = 889 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 87/687 (12%), Positives = 190/687 (27%), Gaps = 142/687 (20%) Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPAD---RYL---PYAISDRRARQSHPVLEAFISLLS 459 ++I ++ + + +F + + P+ I+ +++ + +L Sbjct: 240 KNIGCLIPHLVERRTHLLTIFTDIFTECAPHSIDPPPFNIAAGNPLLEFGLIQTALLILD 299 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 L + +LL P + G + L Sbjct: 300 LKAIN-TFSSLHSLLRSPYIG------------------------GFQREQSPRASLDIF 334 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 R R+ L + ++ + +L + + L L+ + LA Sbjct: 335 ----LRGAENRLSLNQLITISEEQTCFIL---------SRSLKTLLGLIKK--YTCHFLA 379 Query: 580 QERPLEEWLPVCRDMLNAFFLP-DAETEAAMTLIEQQWQAIIAEGLGAQY-GDAVPLSLL 637 + W L+AF P D + W ++ G + + Sbjct: 380 KP---SFWSAYFVKKLHAFSWPGDRPFIREEYQLLDCWSELLTAFAGLDFILGEISHDTA 436 Query: 638 RDELAQRLDQERISQRFLAG--PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 L + + L P+ + L+ + F + ++G +D +P P F Sbjct: 437 LRHLRCHIANTLFQMKTLHDDPPIQVLGLLDAAGMYFDELWVMGFDDKTWPAPAKPNPFI 496 Query: 696 ---LMSQKPKRGDRSRRDDDRYLFL-EALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 L +P S R+ L + L + +KL S + + + PSV +Q L Sbjct: 497 PYALQRGQPIPSSSSEREYYFAAMLTKNLTAHAKKLIFSTAKQHLDE--TLRPSVFIQSL 554 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 + +LP + E++ + + + N+ G + Sbjct: 555 PEIKLNDLHLPPYSTMAKKIMESQEWEYYSDE--CIALTEDNFISGTQL----------- 601 Query: 812 QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN-----FRTEDSEIPD 866 LQ A P +AF + RL+ + + + Sbjct: 602 -------------------------LQSQAACPFQAFARWRLKARTHPFFPQNNGLDARE 636 Query: 867 TEPFILEGLSRY-----------QINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEI 915 L ++ + Q LN + L + + F + Sbjct: 637 RGILFHRVLEQFWNKIKNQETLLSLTQHALNQHIHDAINTCLKIWSKKRPIIFKTYFATL 696 Query: 916 FWETQCQEMQQL--ADRVIACRQPGQSMEID-LACNGVQIT---GWLPQVQPDGLLRW-- 967 + + L ++ Q + L ++ + ++ + + Sbjct: 697 ERQRLSSLLSTLIDLEKQRPHFSETQHEKKQHLKLGPFILSLRIDRIDKLDGNDAMIIDY 756 Query: 968 ---RPSLLSVAQGMQLWLEHLVYCASGGNGES------------RLFLRKDGEWRFPPLA 1012 RP + + + +YC S L + E PL Sbjct: 757 KTSRPQKIDWLDERCDYPQLPLYCLSDPKTVRSFSVWYCHRNRITLKGLSEEETSLKPLT 816 Query: 1013 A------EQALHYLSQLIEGYREGMSA 1033 ALH+ S L++ ++ + Sbjct: 817 PLKKLKTSHALHHWSDLLKHWQLSLEK 843 >UniRef50_Q0TV46 ATP-dependent helicase/nuclease subunit A n=12 Tax=Clostridium RepID=ADDA_CLOP1 Length = 1271 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 45/364 (12%), Positives = 102/364 (28%), Gaps = 72/364 (19%) Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 L + + +DI++++ +++ F +P + ++ Sbjct: 596 LGKYRRIKYKDIVILLRATKNWA----ETFVDELGTYGIPVYADTGTGYFQTIEIRTILA 651 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 LL + D+ +L+ L P+ F T E LR L Sbjct: 652 LLHIIDNPMQDIYILSALRSPI----FSFTSEEFADLR--------------------LL 687 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 Y E + + + EL G L LN WR Sbjct: 688 NKDK--------------YFFEIIKEVVDGIY----DESISKELKGKCKYFLDYLNKWRE 729 Query: 577 GLAQERPLEEWLPVCRDMLNAF-FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 A P++E++ + + ++ + + + Sbjct: 730 K-AAYMPIDEFIWFLYSDTSYYGYVGTMPNGVQRQANLRILFQRAKQYESTSFKGLFNFI 788 Query: 636 LLRDELAQRLDQERISQRFLAGP--VNICTLMPMRSIPFKVVCLLG---------MNDGV 684 ++L + ++ V I ++ + + F VV L G + + + Sbjct: 789 NFINKLKKSSGDMGSAKILGENENVVRIMSIHKSKGLEFPVVILGGTGKQFNKMDLREDI 848 Query: 685 YPRQLAPLGFDLMSQKPKRG-------------DRSRRDDDRYLFLEALISAQQKLYISY 731 + +G + + K + + ++ + A A++KL I+ Sbjct: 849 LLHETLGIGTNCIDVKKRIKYDTLQKHAIKKKCELEVLSEEMRILYVAFTRAKEKLIITG 908 Query: 732 IGRS 735 Sbjct: 909 AVSD 912 >UniRef50_D1V977 UvrD/REP helicase n=1 Tax=Frankia sp. EuI1c RepID=D1V977_9ACTO Length = 1202 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 52/155 (33%), Gaps = 23/155 (14%) Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 L E + A +++ TL + + F +V ++G DG+ P + + + Sbjct: 1048 SLATEADTLDPRADRISLLTLHAAKGLEFGLVLIVGCEDGLLPMTWGRPSR--LGDRAEP 1105 Query: 704 G---------------------DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 G R ++R LF + A+ +L +S++ R Sbjct: 1106 GQAATAGPDTAVDGRAGAATDPARGPLAEERRLFFVGITRARGRLILSHVTVGAGGTVRR 1165 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 PS + +L + + + +++ Sbjct: 1166 APSPFLADLDPRLLDRVTGRPGQLPRQRPAGKQLR 1200 >UniRef50_C2KQX4 Possible UvrD/REP helicase n=3 Tax=Mobiluncus RepID=C2KQX4_9ACTO Length = 569 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 57/388 (14%), Positives = 124/388 (31%), Gaps = 52/388 (13%) Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + +V L + + ++ D Y +A G P I+D Sbjct: 195 RAQVRDLAGEI----------EWAKVSLLAPD--EYVEAARAA-GRMGVANLNPERIADL 241 Query: 443 RARQSHPVLEA----FISLLSLPDSRFV-SEDVLALLDVPVLAARFDITE-EGLRYLRQW 496 A EA F +L + EDVL V F + E + + L+ + Sbjct: 242 AAAYEEVKAEAQALDFEDILLVCAGMLDEREDVLR--AVQARYQYFVVDEYQDVSPLQNY 299 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFG----LTRMLLGYAMESAQGEWQSVLPYDE 552 + +RW ++ + A +++ LT GY + + Sbjct: 300 LL---LRWLGHRRDLAVVGDAAQTIYSFAGATPSFLTDFTRGYPEAKVVELTRDYRSTPQ 356 Query: 553 SSGLIAELVGHLASLL-MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM-- 609 GL +++ L + ++Q + + A+ + Sbjct: 357 VVGLANQVLADAKDAAGRPLGGTVQLVSQREDGPDVQWFIAEDDQTEASTVAKRSWHLMK 416 Query: 610 -----TLIEQQWQAIIAEGLGAQYGDAVPLS-LLRDELAQRLDQERIS-QRFLAGPVNIC 662 I ++ GL + L +++D++ + + S + + Sbjct: 417 QGTNPKDIAILFRTNSQAGLFGTELARMGLPYVVKDQVKSGFEADGASKDSIPREAITLA 476 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 +L + + ++ V L+G ++G+ P L+ ++ +++R L + Sbjct: 477 SLHSAKGLEWEAVFLVGASEGLLPINLSTTD-------------AQIEEERRLTYVGITR 523 Query: 723 AQQKLYISYI-GRSIQDNSERFPSVLVQ 749 A+ L ISY G+ + ER + Sbjct: 524 ARSLLTISYAKGKRPGASGEREACRFLA 551 >UniRef50_C0W129 DNA helicase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W129_9ACTO Length = 1119 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 67/493 (13%), Positives = 144/493 (29%), Gaps = 122/493 (24%) Query: 339 QSDILELENRAVAGVNIEEFSRSD-----NKRPLDPLDSSITFHVCHSPQREVEVLHDRL 393 + +IL+L N A + + + D D I+ + E + +++ Sbjct: 309 KENILDLANLISAPLAQKTYPGVDVIKLVASNSEDADKGKISVFYPATNVEEYRYVAEQV 368 Query: 394 LAMLE---------EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 + D T ++V + P I+A + L A+ Sbjct: 369 KKWKQTYIDPHSGVNDETY-----AILVRSRRHFLPMIEA-----LEAQGLEAAVVGLGG 418 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 + PV+ ++L+ V+ LL D++ ++ L W + Sbjct: 419 LVTQPVIADLRAILAASIDPLDGPAVMRLL------TNLDLSARDIKVLYSWATQL---- 468 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 + +++ G LL + W + D +G A + Sbjct: 469 -------------SKKRNSLEVGRQEFLLDAVDNPPEVGWSA----DGGAGFSARGHQQV 511 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG- 623 L +L R L + + + + + + + + + L A + Sbjct: 512 QLLRDRLAAVRAVLDFD--VSYIVSKAIRVFD--LDVEVDADPYLNLAGTAVDAFLEIAN 567 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP----VNICTLMPMRSIPFKVVCLLG 679 A + L+ D L ++ E+ + A + I T+ + + + V ++G Sbjct: 568 DYASQTEYANLANFLDWLETTVEAEQGLKAPTAQVDSSVIQIMTVHQAKGLEWDRVAVIG 627 Query: 680 MNDGVYPR-------------------------------QLAPLGFDLMSQKPKRGDRSR 708 +N+G +P +A L +L +G+ Sbjct: 628 LNEGGFPSYEGAHFIKYENPATLKSGFSFDARPQSGWLGTIADLPHNLRQDYTFKGEAQI 687 Query: 709 R----DDDRY---------------------------LFLEALISAQQKLYISYIGRSIQ 737 + D+Y L A +++L +S I Sbjct: 688 LPGVPEFDQYEDCDALEAAIEAYRLDLAYYQEREERRLAYVAFTRPKKELVLSGAWYRIG 747 Query: 738 DNSERFPSVLVQE 750 S + PS + E Sbjct: 748 TKSTQLPSRYLTE 760 >UniRef50_C6WJG5 UvrD/REP helicase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WJG5_ACTMD Length = 1001 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 19/137 (13%) Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 ELA ++ + A +++ TL + + F VV ++G Sbjct: 866 ELLKPLAGDCGADFERFHSELALGVEVDTWD--PRADRISLLTLHASKGLEFPVVFVVGC 923 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 DG+ P + ++R L + AQ+ L++S+ + Sbjct: 924 EDGLLPLRWPGADPV----------PDEVAEERRLLFVGMTRAQRHLFLSHSTGRPR--- 970 Query: 741 ERFPSVLVQELIDYIGQ 757 S + +L Q Sbjct: 971 ----SPFLNQLDGVFEQ 983 >UniRef50_B3L6C4 Helicase, belonging to UvrD family, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3L6C4_PLAKH Length = 976 Score = 67.8 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 62/209 (29%), Gaps = 27/209 (12%) Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 + + + ++ L E ++ D+ F L + + Sbjct: 791 NEQVEHQQDEEKDQRRKRSFEEFKDDMDENHPDLVNELKIK------HDLRTHFGLSEED 844 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER--ISQRFLAGPVNIC 662 + E Q + D L L+ + I R L V + Sbjct: 845 LAEEEMQNIFVLLEMTIEYKPNQINEKCS-----DCLICFLNDFKNDIHDRMLVEKVTLT 899 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 T+ + + +KVV ++ +G P + + ++R +F + Sbjct: 900 TIHKSKGLEWKVVFIVNAMEGEIPYAVENSRDII--------------EERKIFYVGITR 945 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQEL 751 A+ LY+ ++ + S V ++ Sbjct: 946 AKFFLYLLCFLQNNHTAEKNTVSRFVSQM 974 >UniRef50_Q5E4C9 DNA helicase IV n=3 Tax=Aliivibrio RepID=Q5E4C9_VIBF1 Length = 687 Score = 67.8 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 11/91 (12%) Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 T + V ++ M DG +P + D + + ++R LF AL Sbjct: 600 TCHASKGTEADYVFIVEMTDGQFPMKERAESLD--TALLPHAESFPYAEERRLFYVALTR 657 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELID 753 A++K++I Y G+ PS VQE++D Sbjct: 658 AKKKVWIVYHGK---------PSPFVQEIVD 679 >UniRef50_B2KE90 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KE90_ELUMP Length = 1074 Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 64/480 (13%), Positives = 139/480 (28%), Gaps = 99/480 (20%) Query: 382 PQREVEVLHDRLLA-----MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 + E + L L +DI V++ +++ +F A + Sbjct: 507 RHNQAEFTAKWIAENAGKLKLSNGSVLQYKDIAVLMRTSNAF-----NIFTEALKRYGVK 561 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 Y + + + + + ++LLSL D+ + + +L P ++ + + Sbjct: 562 YTVEEDKNFYTAQEITDILNLLSLLDNPYDKNALAGVLRSPF----GGFNDDEIYQI--- 614 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 + ++ +LP G R+ Sbjct: 615 -------FKQKFTDISAKKLPK--------GFERL------------------------- 634 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 G L L + ++ +E+ + + F ++ Sbjct: 635 -----GGFYKTLNTLKGFVGRISTGALVEKI------LSSTMFAELSQLAYNGEQTISNL 683 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI-SQRFLAG----PVNICTLMPMRSIP 671 Q A G Q +A L Q R + LA V++ T+ + + Sbjct: 684 QKFAALAAGDQNENANSLGQFLANSKDLARQARGEGESPLADEFLSAVSVMTIHKSKGLE 743 Query: 672 FKVVCLLGM------NDGVYP----------RQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 F VV L M Y R +L + ++ S+ ++ R + Sbjct: 744 FPVVFLADMFRQESVKQNKYSYSWFYDMHGLRAGPYADANLAFLEVQQLWHSKSEEAR-I 802 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 AL A++KL+I +++ P+ L + + E N + Sbjct: 803 LYVALTRAKEKLFI----LGNNTETKKTPAR---HLRNAGLWPELVTVKELPNDKLTHPL 855 Query: 776 VKAHLTCLHTRMPFDPQNYQPGE--RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP 833 + N+ P + A EW ++ + + + + F P ++ Sbjct: 856 QLEYFPYAEPDQFIYKINFTPEDGGVLKNAGEWFNRWAKRSEIYEKIKEEALFISPSSLN 915 >UniRef50_A0M6R8 Putative uncharacterized protein n=3 Tax=Flavobacteriaceae RepID=A0M6R8_GRAFK Length = 927 Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 44/363 (12%), Positives = 104/363 (28%), Gaps = 70/363 (19%) Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF---DLMSQKPKRGDRSR 708 Q + + ++ R++ F+ V + +N+GV P + F DL + R + Sbjct: 500 QGRPFQGLQLMGMLESRALDFETVIITSLNEGVLPAGKSDNSFIPYDLKQEYKLPTYREK 559 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL-IDYIGQSHYLPGDEAL 767 Y F L A+ +Y+ Y + NS S + +L I+ + + Sbjct: 560 DAVYTYHFYRLLQRAK-NVYLLYNTEADGLNSG-EKSRFITQLEIENLKTHTLRKLLISP 617 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT 827 +K + E + L Sbjct: 618 EVPGINKNLKE-----------------------------------VRKTPEIMDKLKSL 642 Query: 828 LPETVPLETLQRFWAHPVRAFFQMRLQVN---FRTEDSEIPDTEPFILEGLSR-YQ---- 879 L + +P+ + Q L V E + + L Y+ Sbjct: 643 ANSGFSPSALTTYIRNPLDFYHQYVLGVRDQEEVEETVAFNTLGTVVHDALENLYKPYEG 702 Query: 880 --INQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF-WETQCQEMQQLAD-RVIACR 935 I ++++ ++ D E + +P + +E + + + + Sbjct: 703 KLITEEIIQGFIKIADREIANEFSKTYSKIPLEKGKNLLIFEVAKRYLHNFLRFELKRLK 762 Query: 936 QPGQ--------SMEIDLACNG----VQITGWLPQVQPD----GLLRWRPSLLSVAQG-M 978 Q + +++ L V + G + + + ++ ++ + + Sbjct: 763 QGEEIQIIQIEKDLKVKLPIEKLPFSVYLRGKVDRFENSKSTPRIIDYKTGKVESRNLNV 822 Query: 979 QLW 981 W Sbjct: 823 TDW 825 >UniRef50_D0WNM4 Helicase, UvrD/Rep family n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WNM4_9ACTO Length = 1079 Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 99/637 (15%), Positives = 180/637 (28%), Gaps = 116/637 (18%) Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY-AISDRRARQSHPVLEAFISLLSL 460 + ++ V+ + P ++A A R +P I R + P ++A +SL+ L Sbjct: 372 GIPYSEMAVVTRSRST-HPGLRA----ALVRRGVPVGQIGTDRPLREEPAVDALLSLVRL 426 Query: 461 PDSR-FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 R F S +++ +L P++ I LR + + + + G L L A Sbjct: 427 ALDRAFGSAELVRVLTGPLV----GIDPLRLRQIGRILRGGELARGGSRSESELLSLAAE 482 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 G +R L G+ E+ AE A + Sbjct: 483 -------GPSR--LSEVAPKGIGDLLRAARMLETVREAAERSNRQAEEV-----LWAAWE 528 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 EEW +AA + ++ Q A VP+ + D Sbjct: 529 SSGKAEEWRKAA-------LRGGTAGDAADSALDSVIQLFRVAQRMADRDVDVPVDAVLD 581 Query: 640 ELA--QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL----- 692 EL + A V + T ++ V + G+ DG++P Sbjct: 582 ELQTHDLPEDSIARAGAAAQTVTLTTPNSSIGRQWEFVVVAGLQDGLWPNMRLRDAYTAT 641 Query: 693 --------------GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 G D ++ + + + DD+ A+ A +L ++ D Sbjct: 642 GRLAQIVTGRDPGAGADGLAGRRQAYE-EILDDELRQLHHAVTRANGELLLTCA-----D 695 Query: 739 NSERFPSVLV-------QELIDYIGQSHYLPGDE-------------------ALNCDES 772 + E PS +EL D GD + Sbjct: 696 SEEARPSRFFELMGFVPEELQDAASAGRQGSGDARQSGGSPDVAGAQSPSAALDSDGVRH 755 Query: 773 EARVKAHLTCLHTRMP--------FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 A L R + G A E L +AG ++ Sbjct: 756 AAAASGRLVLESPRAAEGELDVVGLVADIRRSGAGGREAEEVLARLREAGFRQADRCTWA 815 Query: 825 PFTLPET-----------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE 873 P V ++ P+R F + + D + Sbjct: 816 EALEPTPSRGIEAGGTVVVSPSRVETMLDCPLRGFLSLV-------GAEDSDDRRTADIG 868 Query: 874 GLSRYQINQQLLNALVEQDDAERLFRRFR-AAGDLPYGAFGEIFWET-QCQEMQQLADRV 931 L + I ++ A E+ + + P A E + + + Sbjct: 869 TLV-HAIAERSAGASREEIMGDFEASWAAFDKPEDPVAAQAEYARARILVEGLASYLEDF 927 Query: 932 IACRQPGQ-SMEIDLAC-NGVQITGWLPQVQPDGLLR 966 + I + +GV ++G + +V+ DG R Sbjct: 928 ARGGGSAEVERRISVDMEDGVVLSGKIDRVEHDGAAR 964 >UniRef50_UPI0001850EC4 UvrD/REP helicase n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850EC4 Length = 273 Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 66/159 (41%), Gaps = 11/159 (6%) Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ--YGDAVPLSLLRDELAQRL 645 + R+ + + +A+ T+ ++ + ++AE + +G L D L ++ Sbjct: 113 IKKIREFYDRYL--EADEVKVSTIHQETLKEMLAELESSAKRFGTVAELLSFVDHLIEKH 170 Query: 646 DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA---PLGFDLMSQKPK 702 +Q V + T+ + + FK V L+G ++ + P A DL+ +K K Sbjct: 171 QTLIKNQN--GEGVQLLTIHKSKGLEFKTVFLIGASEKILPHSSALDINNRTDLVIEKKK 228 Query: 703 RGDRSRR--DDDRYLFLEALISAQQKLYISYIGRSIQDN 739 + +++R L A+ A +LYIS +N Sbjct: 229 ELKQQLLAIEEERRLAYVAVTRAIDELYISSPKVYRGEN 267 >UniRef50_A4IZ03 UvrD/REP helicase n=16 Tax=Francisella RepID=A4IZ03_FRATW Length = 688 Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 46/355 (12%), Positives = 98/355 (27%), Gaps = 93/355 (26%) Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 L L ++ + DI ++V +S VF + L Y+I + S + +A Sbjct: 334 LKALIQN-GVDASDIAILVRKYNS-----TTVFELSCLYHDLAYSIVADKNIFSENLFKA 387 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 L L + + Sbjct: 388 IYGYLMLFNKGY------------------------------------------------ 399 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 +HT R+ AM + + + IA + A+ + L Sbjct: 400 ----GFDKHTLEQ---RVEFIKAMLDYPSLYLKKDLKQKLASQIASDISQAANCIAALKE 452 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ---------------- 617 +++ + R++ N + + + A+ I Q Sbjct: 453 TVDKAFKQKNILAISNSWRNIFNNVRI--KKADKAIDFILQSLDLEKQISKVSGETHSSK 510 Query: 618 ---AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 II + G L + L Q + + + I ++ + + + Sbjct: 511 SKLQIIEGMVSFAKGKKNTLIEFIELLYQLYTRSNQQNQSNPNQIQIMSMHRAKGLEWDY 570 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 V + +G + K + D +++R LF A+ ++ L+I Sbjct: 571 VVVHDATEGGF-----------FGDKNTKVDDEIIEEERRLFYVAITRVKKHLFI 614 >UniRef50_A6WGC8 UvrD/REP helicase n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WGC8_KINRD Length = 1123 Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 69/402 (17%), Positives = 105/402 (26%), Gaps = 85/402 (21%) Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 RD+ V++ + ++ A R +PY + R S + A ++LL DS Sbjct: 542 QYRDVTVLLPT----RTPLASI-ERALEGRDIPYRVESRSLVWSTDAVRAVLALLQAVDS 596 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 +LA L P + + L W +G RW I QH Sbjct: 597 PADQVALLAALRQP------GLACSDVD-LVGW-RAAGGRWSIHAAVPE----GIDEQHP 644 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 L + + Q W V E LV AS + WRR Sbjct: 645 VAAALRTLRRWH----EQRWWVPVNQLVEEVVRELRLVELTASQRRPRDHWRRLRFVVDQ 700 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 EW L F + + + Sbjct: 701 AREWCDRGGSGLTGFLSWTVRQQQDSADLVETVV-------------------------- 734 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN-------------DGVYPRQLA 690 V I T+ + + F V + G+N DG P Sbjct: 735 --------PEPDDDAVRILTVHGSKGLEFPVTVVAGLNGSGRDDATVLWAPDG--PLVRF 784 Query: 691 PLGFDLMSQKPKRGDRSRRDDDR---YLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 M + + + ++ L AL AQ L + + + R Sbjct: 785 RADVLEMPGWRQASQDEKAESEQEAIRLLYVALTRAQDHLVVGCYHKPSRTGGSRA---- 840 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 + L D L ESE R + PF Sbjct: 841 --------QKLWELLADSGLARCESEPRAQRAAQGTAPATPF 874 >UniRef50_Q0BZ49 UvrD/REP helicase domain protein n=2 Tax=Rhodobacterales RepID=Q0BZ49_HYPNA Length = 1137 Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 58/425 (13%), Positives = 110/425 (25%), Gaps = 72/425 (16%) Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE-EWLPVCRDMLNAFFLPDAET 605 + S L ++ + + + D+ +A Sbjct: 651 LETASGMSEGGRASAKALVGAFEEIEPTATAWQVFTKIYLDRTRLAADIATQAREGNANP 710 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTL 664 A+ + ++++ E G D + L+ D + V + T+ Sbjct: 711 ALALWQFQNFLRSVLPEKSGYPIRDLLDHIRRLVILSDERDLRDLPATAQTINAVRLMTI 770 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG---------DRSRRDDDRYL 715 + + FK++ L + PR G D ++ R L Sbjct: 771 HGSKGLEFKMLHLPSLTSDSIPRSAKQSRGLHPPDGMIEGPMFRGSDAIDAGHDEEQRCL 830 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 F AL A+ L++ Y + + S V ++ + + + Sbjct: 831 FFVALSRAKDGLFL-YAPNKKSNGHRQSRSSFVDDISGQLADQKPISAVRDV-------- 881 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLE 835 G+A L + Sbjct: 882 -------------------------------------VGEAERF---TLEVDGVARMSPS 901 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE 895 L F P R FF LQV R +S + + Q L A + E Sbjct: 902 QLATFDKCPRRFFFAHVLQVGGRRLESAP-------MRMHNAVQAVIDELTARPDDTPDE 954 Query: 896 RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD-----RVIACRQPGQSMEIDLACNGV 950 + A + +G + Q +L R CR+P Q++ + V Sbjct: 955 TEMQSIIDAAWVAHGPIEHGYASEYRQICDELLKFFILLRQGECRRPPQTLSLRFEDAEV 1014 Query: 951 QITGW 955 +T Sbjct: 1015 VVTAH 1019 >UniRef50_C6PW57 UvrD/REP helicase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PW57_9CLOT Length = 1112 Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 52/493 (10%), Positives = 131/493 (26%), Gaps = 110/493 (22%) Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 D L +DI ++V I + R +PY I ++ ++L Sbjct: 431 RDKNLEFKDICILVRS----RSVIPDI-EEELKRRNVPYCIIGGVGFYQKAEVDEILNLY 485 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + F E T E + Q + S L Sbjct: 486 KVIVRGFSGE----------------FTYEENKNFIQVLRGS---------------LFE 514 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES--SGLIAELVGHLASLLMQLNIWRR 576 T LL +E + +++ + G+ +E + + ++L +L + Sbjct: 515 ISDDT--------LLKMNIEKEESSLENLYEALKVYEDGMHSEKLLNTVTILEKLAGLKE 566 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 L+ + ++ + C ++ D + + ++ E L Sbjct: 567 KLSVVQIIQAIIKEC-NVFEIMLCQDNGLQKFRN-----IEKLLQEAEKFDREQLFTLEQ 620 Query: 637 LRDEL-----AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 + + D E + V I T+ + + FK V + ++ + Sbjct: 621 FVNYINLLDEENGDDSEAALDTEDSEAVKIMTIHQSKGLEFKGVIIPKIHSDLLSMSKKD 680 Query: 692 -----------------LGFDLMSQKPKRGDRSRRDDD----RYLFLEALISAQQKLYIS 730 +L + + + S+ + + L A+ A+ + ++ Sbjct: 681 KPNLVYNKNSIILSKDLENVELTTPEYEEYLNSKLEKEIEETERLLYVAMTRAEDYVILT 740 Query: 731 --------YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 + D + + +++L + + ++ Sbjct: 741 GGDDGKDPTPIKDETD-KIKELNSFLKQLKYSFTVGNADKELIEFINSDDIEDLEVIKRK 799 Query: 783 LHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWA 842 + +E L + + +V ++ Sbjct: 800 ISKVQ--------------IDKEKLQESLNYKGNIKNYA---------SVSATRYMKYLK 836 Query: 843 HPVRAFFQMRLQV 855 P R + + L + Sbjct: 837 CPRRFYLESVLNI 849 >UniRef50_C6B123 Double-strand break repair protein AddB n=19 Tax=Rhizobiaceae RepID=C6B123_RHILS Length = 1064 Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 86/679 (12%), Positives = 175/679 (25%), Gaps = 101/679 (14%) Query: 333 NLLHNIQSDILELENRAVAGVNIEEFSRSDNKRP-------LDPLDSSITFHVCHSPQRE 385 LL ++D+ + E + L S ++ + + E Sbjct: 315 TLLDRPEADLERRAEILSQALAPAEATSDWGAWKTDLPAGALSSSFSDVSLIEAANEREE 374 Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 + L LE + ++ D + V + + S Sbjct: 375 ATAIAIALRLALERPGQDSESRAALITPD----RNLARRVMAE-LSRFGILADDSAGTPL 429 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 + P LL +++LL P+ ARF + L + + +R G Sbjct: 430 SAMPQGTLLQLLLEAALRPGDPVAIISLLKHPL--ARFGLERGALISATEALELLALRGG 487 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 + T L L A++ +W+ L E++ +L + Sbjct: 488 ----------VAEVDISTLEPLLAHQLAEQALDRHAPQWRKALS-PEAADAAYDLARRVT 536 Query: 566 SLLMQLNIWRRGLAQER-------PLEEWLPVCRDMLNAFFLPDAETEAAM--TLIEQQW 616 L E L EW L A + A + Sbjct: 537 QATEPLASALMRERPEDRGRTARFTLSEWAKRTGRSLEAVAVDPHGNLADLWSNEAGDAL 596 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP--VNICTLMPMRSIPFKV 674 A++ E + D +A + R L+ P TL R Sbjct: 597 AALLGEVIDTDGQMEADGPQWIDIMAALAAGHAVKPRALSHPRLFIFGTLE-ARLQSVDT 655 Query: 675 VCLLGMNDGVYPRQLAPLGF--DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 + L G+N+G +P Q A F +M + RR E + ++ Y Sbjct: 656 LILGGLNEGTWPGQTANNPFIPRMMKTEIGLEPPERRIGQLAHDFEMANGTR---HLIYS 712 Query: 733 GRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ 792 Q ++ S +Q L+ F+ + Sbjct: 713 RALRQGSTPTVASRWLQRLLAL------------------------------GGEAFEAE 742 Query: 793 NYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMR 852 G R + A +P P++ + R P + + Sbjct: 743 LKGRGNRFLQWAALIDRGDAQAPAQRPSPKPPLALQPKSYSFSEVGRLRRDPYAIYARRV 802 Query: 853 LQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDA----------ERLFRRFR 902 L+++ + P R + ++++ + + E + Sbjct: 803 LRLDPVEPFNRDP-------GAAERGTLYHKIIDRFIREAHIAGTPDAAAAMEAILSELF 855 Query: 903 AAGDLPYGAFGEIFWETQCQEMQQLAD-----------RVIACRQPGQSMEIDLACNGVQ 951 LP ++ + + + R + I++ GV Sbjct: 856 DMEKLPPH-IDAVWRPRFRAVARAFLEWEAGRRHGILKTLTEVRGGMELEPINIRLTGVA 914 Query: 952 ITGWLPQVQPDGLLRWRPS 970 + ++ ++ Sbjct: 915 DRIDVTGPHSADIIDYKTG 933 >UniRef50_Q31P32 Putative uncharacterized protein n=2 Tax=Synechococcus elongatus RepID=Q31P32_SYNE7 Length = 1061 Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 81/709 (11%), Positives = 177/709 (24%), Gaps = 149/709 (21%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML-------- 397 + S+ + +E + ++ + Sbjct: 444 QPLRSDRQPPHPLPPIQQLVIEPEEKDSLE----QARIQEATAIAQQIQTWIQQPLLVWD 499 Query: 398 ---EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 + + DI ++ ++ V+G +P ++ + PV Sbjct: 500 KPSNQHRPIAYGDIAILCRR----RAPLETVYGEVLNQAGIPVLVNGGGSLLETPVGYDL 555 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 +LL + LL P F +++ L + G W + +E Sbjct: 556 QALLEFLVYPSNDLALATLLRSPA----FGLSDAQLYQR----AQQGKGW---WSHRQER 604 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 PA ++L G ++ + + + ++ L L W Sbjct: 605 PDPAF------AAAIKILEGLLRSRFLESPLRLVQQFDRATGYSAVLASLPQAQRLLADW 658 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 + L FL + + L+ + W+ + +P Sbjct: 659 QALLT-------------------FLREQPQAHDLELLLRYWKQLQQA------EVVLPR 693 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL-- 692 +L V + TL + + + VV + + PR A Sbjct: 694 PVLEA----------------GNAVTLMTLHGSKGLEWPVVIIPDLTAK--PRSQAETVL 735 Query: 693 -----GFDLMSQKPKRGD--------RSRRDDD---RYLFLEALISAQQKLYISYIGRSI 736 G L K R ++ +D R L A+ L ++ S Sbjct: 736 FDTELGVALRQPYVKEQAAAYQFFKYRKQQAEDAETRRLLYVGFTRARDLLLLT----SP 791 Query: 737 QDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP 796 + R P +D + + L+ + Sbjct: 792 KSAEARSP-------LDLLAPGLEQAAIQPLDPNSGTEIAVT------------------ 826 Query: 797 GERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN 856 A + + ++ P F+ Sbjct: 827 -----------ATLPTADAPLFWQSTAAIAPQYSELSVSAFADYFRCPALFHFRYTQG-- 873 Query: 857 FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 + + L + + L + Q +A + + +P + Sbjct: 874 --HPGAIDGEGAGTSDRPLQLGLLVHRALELDLRQPEALKPYCAAEDQDLIPQA----LQ 927 Query: 917 WETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 + + +Q ++ ++L+ G+ + G V D +L ++ + Sbjct: 928 LASCFATEPVYSAVREQAQQREVTLHLELSS-GLVLKGRADLVGADWVLDFKTDQQPQPE 986 Query: 977 GMQLWLEHLVYCASGGNGESRLFLRKDGEW---RFPPLAAEQALHYLSQ 1022 QL L + +W F P AE+A L+Q Sbjct: 987 NYQLQLWAYAAALNRPQAAIAWLRHNQLDWIEIEFIPDQAERAAVQLAQ 1035 >UniRef50_C7RGF9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7RGF9_ANAPD Length = 1121 Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 58/429 (13%), Positives = 122/429 (28%), Gaps = 96/429 (22%) Query: 339 QSDILELEN-----RAVAGVNIEEFSRSDNKRPLDPLDSSI----TFHVCHSPQREVEVL 389 Q D+L+ +N + ++ ++ + + S V S RE + L Sbjct: 449 QKDVLDFDNFIFDRLMTKEESDIDYRDGGHRLNFNKNEQSAYERANIKVIDSKIREEDYL 508 Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 + + RDI +++ V+ A +P+ + Sbjct: 509 AKLIEEI--RAMGYDYRDIAILLRSGGK-----SYVYEEAFKKAEIPFFNDISKVSFRAV 561 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 + FI+LL + +L+LL + FD E+ L +R + D+ Sbjct: 562 EVTFFINLLKYLANPKDDLTLLSLLRSEI----FDFDEDDLVEIRLSSDSYSFTKAFDEY 617 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 + E + F +++L E + + E G Sbjct: 618 DKDEEIVEKINDFKTIFA------------DLTYVKNLLSLYEFANYVFEKTG------- 658 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 + L + + ++ I+ E Sbjct: 659 ----FYEYLLARDRASDRINNVESFID----------------------IMDEYDRTNDN 692 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLA---GPVNICTLMPMRSIPFKVVCL--------- 677 D L+ + R L+ V I T+ + + F VV L Sbjct: 693 GLFGFLEFVDSLSINQSDNIQTTRELSEAEDLVRIMTIHKSKGLEFPVVILADCGKRFNN 752 Query: 678 --------------LGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD--DDRYLFLEALI 721 +G+N Y L F + + ++ + ++ + A+ Sbjct: 753 KHLREPIVFDDDLGIGINLSDY---ENKLRFSSLRKNLINDKITKENKKEEMRILYVAMT 809 Query: 722 SAQQKLYIS 730 A++ L+I+ Sbjct: 810 RAEEMLFIT 818 >UniRef50_A6P133 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P133_9BACE Length = 1053 Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 62/196 (31%), Gaps = 41/196 (20%) Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 A+ + +L+ QL L L +N E M + ++ Sbjct: 876 DADGLSRFRALMEQLAP----LVGRDKPVRLLEAYGRAVNQAGTEPLERLMNMAVFHRRM 931 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 + + + D + Q + AG V + TL + + F VV Sbjct: 932 EDFLLSLTVGREADLL---------------RSAGQGYRAGYVTLTTLHAAKGLEFPVVF 976 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 L G+ G+ P + + D + ++R LF + A ++L + Sbjct: 977 LCGVEKGLLP----------YCSRRRASDPA---EERRLFYVGMTRAMEELILV------ 1017 Query: 737 QDNSERFPSVLVQELI 752 + PS + ++ Sbjct: 1018 ---AGPEPSPFLADIP 1030 >UniRef50_C6JEU5 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEU5_9FIRM Length = 1269 Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 54/401 (13%), Positives = 116/401 (28%), Gaps = 80/401 (19%) Query: 379 CHSPQREVE----------VLHDRLLAMLEED-------PTLT---PRDIIVMVADIDSY 418 +RE+E + R+ ++ ++ DI++++ +Y Sbjct: 545 ASGNRREMENQTGQELEALAIAQRIKEIVGKEQIVDKEKKEYRSVEYGDIVILLR--TAY 602 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 F A + +P + R S + ++ L + D+ ++ +L P+ Sbjct: 603 G--WAETFREVLASQGIPVYCTSRTGYFSATEIVTVLNYLKVCDNPLQDIPLMGVLRSPI 660 Query: 479 LAARFDITEEGLRYLR-QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + T + L LR Q+ + G+ + E E+P Sbjct: 661 V----GCTSQELAELRIQYPD--GLLYESVSAYAGENEIPEKEL---------------- 698 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDML 595 +L + + L L L L R +A P+ E + Sbjct: 699 -DPDKLKSELLNSNLRTDEKNSLNIKLKGFLSLLEKVRN-MATYTPVHELILYVLKETGY 756 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 + E + + + Y ++L Q + L Sbjct: 757 GDYARALPGGEQRFANLTMLVEKAMDY-EKTSYRGLFNFVRYIEQLQA--YQVDYGEVNL 813 Query: 656 AGP----VNICTLMPMRSIPFKVVCLLGMN----------------------DGVYPRQL 689 G V I T+ + + F VV + GM D + P + Sbjct: 814 TGAGNTAVEIMTIHKSKGLEFPVVFVAGMGKQFNFQDMNAGLLLHPELGIGADAIIPEKR 873 Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 ++ + ++ + A+ A++KL ++ Sbjct: 874 VIASSLNKQVIRRQLLKESLGEELRVLYVAMTRAKEKLILT 914 >UniRef50_A6L5X5 Putative uncharacterized protein n=19 Tax=Bacteroides RepID=A6L5X5_BACV8 Length = 959 Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 68/495 (13%), Positives = 133/495 (26%), Gaps = 104/495 (21%) Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 L + + T ++ V++ + +Q V S PA+ I+ P Sbjct: 298 ARYLPQWIRNNLTTPEKETAVVLCN----EALLQPVLHSLPAEVK-HVNITMGFPLSQTP 352 Query: 450 VLEAFISLLSL-------PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 V I+LL L R+ + V+ LL P L + + + Sbjct: 353 VYSFLIALLELHTHGFNFKSGRYTFQSVVTLLKHPYTRQLTG----QAELLEKELTRNNR 408 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 + + + ++ L T T G + L + + + + S + Sbjct: 409 FYPLPGELGKDEFL--TRLFTPLSG--NLNLCIRLSETLQQVAGIYQANTSGTEDTDAFN 464 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L +R L + + R ++ Sbjct: 465 QL---------YRESLFKAYTT---INRFRTLIEE------------------------- 487 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERIS-QRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 V R L + L I A + + ++ R++ F+ + LL +N Sbjct: 488 -----DELTVQSETFRRLLVKVLSATNIPFHGEPAIGMQVMGVLETRNLDFRHLVLLSVN 542 Query: 682 DGVYPRQLAPLGF---DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 +G P+ F +L + Y F L A +++ + Y S Sbjct: 543 EGQLPKSGGDSSFIPYNLRKAFGMTTIEHKIAVYAYYFYRLLQRA-ERITLMYNTSSDGL 601 Query: 739 NS---ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ 795 N RF + E I + G S V+ + Sbjct: 602 NRGEWSRFMLQFLIEWPHPITRQFLEAGQSPQGT--SPITVEKTPDVMRRMQSL------ 653 Query: 796 PGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQV 855 + P A L + P++ +++ + Sbjct: 654 ------FDVRANPKAKF--------------------SPSALNYYLDCPLKFYYRYVAGL 687 Query: 856 NFRTEDSEIPDTEPF 870 + E S D+ F Sbjct: 688 SAPDEVSAEIDSATF 702 >UniRef50_Q1Q555 Similar to DNA helicase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q555_9BACT Length = 641 Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 65/373 (17%), Positives = 109/373 (29%), Gaps = 81/373 (21%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVA-----DIDSYSPFIQAVFGSAPADRYLPYAI 439 E E + + + P L D V+ D+ G +P Sbjct: 340 EAEWIAQDIAK---KTPQLR-TDCAVLARTKKLLDLA----------GRKLEGAGVPVYY 385 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 + R+ L ++L L +S + + L I+ E L Sbjct: 386 AARKDEFKSAPLRMLHAILRLVNSTEDKQSLARL--SKAFYELEGISIELAPVLS----- 438 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 R D ++ L + A E L L+ Sbjct: 439 ---RASADGKDLLRCWLDEVKR----------------RDALEEETLRLLETGIKPLLNS 479 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 L +L W Q +E NAF D E E W+ + Sbjct: 480 LNYR--DFADKLLKWAEACQQTSRPDE---------NAFNEFDEERE--------VWKLL 520 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 +AE G+ V L +L LD + V T+ + + F V L+G Sbjct: 521 LAEITKKFDGEDVSL----HQLLHELDLTSKTLPKPPEAVPCFTIHASKGMEFGQVYLMG 576 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRR-DDDRYLFLEALISAQQKLYISYIGRSIQD 738 + + P A K+GD S ++R A+ AQ+ L +++ + Sbjct: 577 LVEDQLPSWAAV----------KKGDNSLEMQEERRNCFVAITRAQESLTLTFSAQ--VF 624 Query: 739 NSERFPSVLVQEL 751 + PS + E+ Sbjct: 625 GWPKQPSRFLSEM 637 >UniRef50_B8IZF8 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IZF8_DESDA Length = 1000 Score = 67.0 bits (162), Expect = 5e-09, Method: Composition-based stats. Identities = 96/724 (13%), Positives = 186/724 (25%), Gaps = 126/724 (17%) Query: 433 RYLPYAISDRR---ARQSHPVLEAFISLLSLP-----DSRFVSEDVLALLDVPVLAARFD 484 +LP+ + + P+ LL L + R+ +L L P + Sbjct: 347 HHLPHKDVNVSMGYPLERSPLNRLLDGLLRLQATRSDEGRYYWRHLLQCLRHPYVNML-- 404 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 P + R L R++ Sbjct: 405 ------------------------RTRDAYGQPLLLRDALR-PLERII-----REGTRFV 434 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 E G + E + L L R A E+ V + + + Sbjct: 435 DLDEVILECRGQLPEALAQLLE--ETLEALVRAPAGAATTEDMARVLHGLCSFLRCRGDD 492 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYG-----DAVPLSLLRDELAQRLDQERISQRF-LAGP 658 L + ++ + + PL+ L + L QER+ Sbjct: 493 LWRHFPLDAEAMYRLMRQTVPVLRENLLARTPFPLTTLHGMTREVLGQERVPFEADPLTG 552 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR---YL 715 + + ++ R + F V ++ D P A S + G R +R + Sbjct: 553 LQVLGMLETRLLHFGRVFIVDATDDRLPGNPAQDPLLPDSLRQVLGLPDSRRRERAAAHT 612 Query: 716 FLEALISAQQ--KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 AQ+ + I RS + ++ S V++L+ E Sbjct: 613 LYRLCAGAQEVSFFWQEGISRSSLFDGKKSRSRFVEQLL------WQEELARGAVLAPGE 666 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP 833 ++ + + + + + ++ L L E + Sbjct: 667 PPLETAVCEV---------------------RAAASGEKQLERSADMNDALARLLREPLS 705 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI---LEGLSRYQINQQLLNALVE 890 L + P+R +Q + E +E D + L + + LN V Sbjct: 706 ATRLDVYLQCPLRFAWQYLCGLRPPKEINEGDDPAAVGTCIHDTLK--ALYEPYLNKTVR 763 Query: 891 QDDAERLFRRFRAAGDLPYGAFGEIFWET---QCQEMQQLADRVIACRQPGQ----SMEI 943 D R R L ++ +E + QP ++E Sbjct: 764 SGDISAETVRARFYEQLEAHGLRKLLPADSCLMLEEAAPMRLMRFLENQPADVTIMALEK 823 Query: 944 DLACNGVQITGW-LPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRK 1002 +L +++ G V + WR L V ++ L G F + Sbjct: 824 ELKV-PLRLAGRDYAFVGAMDRVDWRDGLFYVLDYKTGGIKKL----DGSLWTDLAFFSR 878 Query: 1003 DGEWRFPPLAAEQA-LHYLSQLIEGYREGMSAPLL---VLPESGGAWLKTCYDAQNDAML 1058 G+ A++A +L QL + + + L + A Sbjct: 879 AGQLCDTLTPAQEAGESHLQQLEALFSQ-LRERLPSLQLPCYLAMA-----------QAS 926 Query: 1059 DDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 A + + + G D+ + + PL Sbjct: 927 GMTPLSDAALVELRDDGREHPLFGGLVDE----------DLDAALGFCRTALAL--PLLH 974 Query: 1119 FNQS 1122 S Sbjct: 975 MEYS 978 >UniRef50_D0LEA1 UvrD/REP helicase n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LEA1_GORB4 Length = 1119 Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 109/746 (14%), Positives = 198/746 (26%), Gaps = 128/746 (17%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL--LAMLEE 399 +L L N A + S + D S + + E E + D + E Sbjct: 360 VLRLANHVSAELRRRGIPVSVLRARPDAPSGSAHIALTETVVDEREWIADAIETRWRAAE 419 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 + P ++V + +P + R +P + P + +S L Sbjct: 420 NDGQAPPTTAILVRRNEDSAPL-----AAELERRGIPAEVVGIGGLLHVPEVTDVVSTLR 474 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 L + LL AR+ + L L W + E A Sbjct: 475 LMADPMAGTAAMRLL----TGARWRLGAADLAAL----------WRRAAELAAEEIAAAG 520 Query: 520 GQHTWRFGLTRML---LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 G T R L L L + G +V+ + S + + + QL RR Sbjct: 521 GAVTSREQLDAALDAVLPTEVVDRAGIADAVVDPGDPSRYSPDGYARIRAFGAQLESLRR 580 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT--------LIEQQWQAIIAEGLGAQY 628 + Q P + D+ N + A + + + Sbjct: 581 RIGQPLP-----ELVADVENTIGVGVEAQIRARRMRGAITGREHLDAFAEYVTRYADRRG 635 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGP-VNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 D L + + +A V I T+ + + + VV + + ++P Sbjct: 636 ADLPGLLAFLETAETIEKGLEPGRIEVAEQRVQILTVHAAKGLEWDVVAIPHLCHNIFPG 695 Query: 688 -----------------------------QLAPLGF---------------DLMSQKPKR 703 P G+ D ++ + Sbjct: 696 GKAETTWLGSARELPGELRGDLAIAAEQGSAHPEGYPVLDLHAVTDRKELEDTIATYKEA 755 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 R ++DR L AL A+ L IS S + R S EL+ I + P Sbjct: 756 IADRRLEEDRRLLYVALTRARHDLLISAHHWSESGDKPRGGSEFFTELLTAISDAVDDPT 815 Query: 764 DEALNCDESEARVKAHLTCLHTRM--------PFDPQNYQPGERQSYAREWLPAASQAGK 815 E+ + + P DP + ++ A L + Sbjct: 816 VESGGLVVDVLAPEPDDGAPNPLAERVLAAPWPADPLAGRRDGVRAAADLVLAEIAARDA 875 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMR----------------------- 852 P + + L W V A R Sbjct: 876 PALFDTDGAPESDGDP-DLSDEIAAWEAEVSALLVEREASNQALVEVELPTHLSVSQLVE 934 Query: 853 LQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAF 912 L + + PF +R +A VE+ R +LP A Sbjct: 935 LDADEAEFARRLRRPTPFRPNPTAR---RGTAFHAWVERWFGA---TRLLDIDELPGAAD 988 Query: 913 GEIFWETQCQEMQQ--LADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPD-----GLL 965 + ++ LA + + G+ + G + V D ++ Sbjct: 989 ATATPDADLDALRDAFLASPWANRSPSEVEVPFETVIAGIVVRGRIDAVFADPDGGWTVI 1048 Query: 966 RWRPSLL-SVAQGMQLWLEHLVYCAS 990 W+ ++ A+ L+++ Y + Sbjct: 1049 DWKTGVVPEPARRESLFIQLAAYRIA 1074 >UniRef50_B8HWJ9 UvrD/REP helicase n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HWJ9_CYAP4 Length = 827 Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 60/469 (12%), Positives = 128/469 (27%), Gaps = 79/469 (16%) Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 H P+ E + +L ++ + +++++V P A + + Sbjct: 337 LHPARHPRELAETVVKEVLQ--SQERGTSLAEMVILVRTYGQTPPL-----EQAFLNAQI 389 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY + P + + L L L + Sbjct: 390 PYRVVGNLPFYRRPEILGLLKYLELAQLEQRR------LSEGLTPVEQG----------- 432 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 +WG + L ++ R + G + +Q + Sbjct: 433 -------QWGACWLQIYNTPL----RYIPRAVAEEIREGAVLAGECLVYQLRKTTADQPE 481 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR--DMLNAFFLPDAETEAAMTLIE 613 + + LA +L + L E L + + ++ + Sbjct: 482 WLQRRLRELAQVLEWVLSQTETTPAASVLAELESRLGYCRYLTSRSQAEETGQSRAENVR 541 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 Q E L + R + + ++ + + ++ Sbjct: 542 AAIQ-WSQGFGSVG------------EFLAHLQKLEQPDRDQPHCLTLMSIHRAKGLEWE 588 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 V L ND V P+ R+ R+++R L AL +++ L++ ++ Sbjct: 589 TVFLPFCNDKVIPQ-----------------ARADREEERRLLYVALTRSRRDLHLLWL- 630 Query: 734 RSIQDNSERFPSVLVQE--LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 + S +QE + Q L + E A L L + P Sbjct: 631 ------KDEPISPFLQESQCQRVLEQCQTLTRIYEHSPREWSAHDLVTLVRLSPWLGL-P 683 Query: 792 QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 + Q W A++ + +Q + V LE L+ + Sbjct: 684 RYLSHYGEQP--PTWTAIAAERLQQVLRIIQTQGWETKLGVDLEQLEAW 730 >UniRef50_A5GF30 UvrD/REP helicase n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GF30_GEOUR Length = 620 Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 26/194 (13%), Positives = 59/194 (30%), Gaps = 28/194 (14%) Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 + + + + L ++ + P+ E + Q Sbjct: 447 RASAIVDAIDAVARQTQRLDLMLGIKSLRAFADSL------PEVERLVIYEDLAVLQQEW 500 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 + + L Q+ V + T+ + + F VV + G Sbjct: 501 DQYLRSDGAARTIAGFMSSKALGAT-------QQASRDGVALLTVHSSKGLEFDVVFIAG 553 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI--- 736 M DGV+P +G + ++ A+ +++ LY+S+ R + Sbjct: 554 MADGVFP------------DYRAQGKKKEMAEEARNAFVAVTRSKRLLYLSFPKRRMMPW 601 Query: 737 QDNSERFPSVLVQE 750 D + PS +++ Sbjct: 602 GDEKRQQPSCYLRQ 615 >UniRef50_A6BJ96 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A6BJ96_9FIRM Length = 1221 Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 52/395 (13%), Positives = 106/395 (26%), Gaps = 94/395 (23%) Query: 384 REVEV--LHDRLLAMLEEDP----------TLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 RE+E + R+ +L + DI+++ I ++ VF Sbjct: 542 RELEARMIAMRIRELLRSQKVTDKETGELRNVRYSDIVILTRSIKGFAD----VFTEVLN 597 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +P + + L + D+R + A+L +++E L Sbjct: 598 REGIPTYAGTSEGYFQTQEIGVLMDYLRVLDNRRQDIPLTAVLSSAF----AGLSQEELA 653 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 +R A ++SV Y Sbjct: 654 EIR----------------------------------------CAYPDTA-FFESVTKYR 672 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE---WLPVCRDMLNAFFLPDAETEAA 608 E G A++ L L Q++ +R+ W + + Sbjct: 673 E-QGENADIQLKLQKCLDQMDDFRKI--VPYTPMHELLWKILETTGYGDYVASMPGGAQR 729 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF--LAGPVNICTLMP 666 + Y ++L + + A V + T+ Sbjct: 730 KANL-DMLIEKARAYESTSYKGLFHFVRYIEQLQKYDVDYGEASIEDEHADTVRVMTIHK 788 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPL----------GFDLMSQKPK-------------R 703 + + F VV + GM + Q A G D ++ + + Sbjct: 789 SKGLEFPVVIVAGMG-KRFNMQDARSAVALHAGMGVGLDAVNLEYRTKIPSIIKKVIQKE 847 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 ++ + AL A++KL I+ + +D Sbjct: 848 EALESLGEELRVLYVALTRAKEKLIITGTLSNPED 882 >UniRef50_A2TR02 Putative uncharacterized protein n=1 Tax=Dokdonia donghaensis MED134 RepID=A2TR02_9FLAO Length = 896 Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 72/500 (14%), Positives = 149/500 (29%), Gaps = 87/500 (17%) Query: 575 RRGLAQERPLE-EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 + L + L EW + ++ ++ + Q G + Sbjct: 401 QEHLNIAKTLFLEWNDNPKLAVSNCLQIISDLRTIYDETQNSLQVEYLYGFYVAFNKLKT 460 Query: 634 LSLLRDELAQR----------LDQERISQRFLAGP-VNICTLMPMRSIPFKVVCLLGMND 682 L +R+ ++ + E I + + I ++ R + + V L +N+ Sbjct: 461 LMEVREHISDISTFILFYRDIISSETIDLKGDPDQGLQIMGVLESRVLDYDHVILTSVNE 520 Query: 683 GVYP---RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ--QKLYISYIGRSIQ 737 G+ P Q + + +DL + Y F L A LY ++ S Sbjct: 521 GILPSGKSQNSYIPYDLKKLYDLPTYSEKDAVYAYHFYHLLHRASTVDLLYTTHS--SGL 578 Query: 738 DNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG 797 +SE+ S ++++ H +T P + Sbjct: 579 GSSEQ--SRFIRQI----------------------EEEGIHNLTKYTVTPASHSTSKKS 614 Query: 798 ERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNF 857 Q E V L L + L + +PV + + L ++ Sbjct: 615 --------------QVIAKTPEVVTKLSQFLKRGISPSALTTYLRNPVLFYERYILGIDS 660 Query: 858 RTEDSEIPDTEPF------ILEGLSRYQIN----QQLLNALVEQDDAERLFRRFRAAG-- 905 E E LE L + I + +L L++ + E + G Sbjct: 661 SDEVEETVAANTMGTIVHNTLEELYKPHIGIILTEDILKNLIKGIEQEVRNQFKSEYGLT 720 Query: 906 DLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSM---EIDLACNGVQITGWLPQVQPD 962 + G +I + C+ + R I+ + G ++ ++ + +T + Sbjct: 721 HIQEGK-NKIIYAVICRYVHNYLKREISLLKKGDTVIIQAVEDDLRDISLTDTITLRGKV 779 Query: 963 GLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQ 1022 L+ R L++ +G ++ L L+ + P E+A L Sbjct: 780 DLVEQRNGHLNIIDYK-----------TGKVTQTDLNLKSYEDLLLPEGKFEKAFQVL-- 826 Query: 1023 LIEGYREGMSAPLLVLPESG 1042 + + PL +G Sbjct: 827 -MYAFMLHKKKPLQFPVNAG 845 >UniRef50_Q2IKV6 ATP-dependent nuclease subunit B-like n=3 Tax=Anaeromyxobacter RepID=Q2IKV6_ANADE Length = 1029 Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 94/648 (14%), Positives = 159/648 (24%), Gaps = 105/648 (16%) Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 L P D+ ++ P + A R +P+A A P++ L+ Sbjct: 296 GLAPEDVALVSPAPRRAGPAL----ARALGARGIPFASGRGPALAEVPLVRWVREALA-A 350 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 LL LAA + ++ +G +D L Sbjct: 351 AGDLGRAAAERLLSSGWLAAPGGGAVGPV------LDRAGA---LDGRGPPAAALRRRLA 401 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 A ++ L + G L++ L + RR Sbjct: 402 ALGGAAGRERAAVARAAGAVEALEAALRPLAAPGTARAHAARLSAFLDASGLRRRAARGP 461 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + A L E + A L + G A+ + + L Sbjct: 462 S----------------AEVARDLAALAGLEEAAEAVVRASALLGEGGAALAPAAFLERL 505 Query: 642 AQRLDQE--RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 L+Q AG V + L + + V + G G AP L+ Sbjct: 506 GLALEQAALPPGPEPAAGAVELSGLDEAPGLSARAVVVTGAGHGA--FPAAPPPEPLLRD 563 Query: 700 KPKRG------------DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ-DNSERFPSV 746 + +RR + Y AL + ++ + I++ D P Sbjct: 564 PERLALNRRLRRAAVAPAGARRAEATYRAFAALAAGREAVAITWAAPGPAGDGGPLAPLA 623 Query: 747 LVQ------ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 EL A V+A + Sbjct: 624 AEALAAAGVELAGPAAAPEPPLARARTVRAALRAAVRAGDAGAAALAGTALGPRAADALR 683 Query: 801 SYARE--------WLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMR 852 A E A AG+ + L LPE L+ + P R F Sbjct: 684 RGAIESARRAAVLARRPAPYAGQVDPPALAALAAALPEEWAPTRLEGYARCPFRGFLAQV 743 Query: 853 LQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD-------------------- 892 L++ R ++ + L V Sbjct: 744 LRLPDRAAAD-------LDIDPRDEGSLLHAALERFVRGRMERHAWPPDGGEADLAEMRA 796 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ-----------LADRVIACR----QP 937 A +F RF G A E + + LA + R P Sbjct: 797 AAAEVFARFEREGRTGDPAAWAARREAVLARLDRVVRAEARDHGGLAPAAVELRFGRGGP 856 Query: 938 GQSMEIDLACNGVQITGWLPQVQ--PDGLLRWRPSLLSVAQGMQLWLE 983 ++E+ V++ G + ++ P LL L+ Sbjct: 857 LPALELAWDGERVRLEGRVDRIDAGPGRLLVVDYKNARSGDAYADGLD 904 >UniRef50_C7MBM5 DNA/RNA helicase, superfamily I n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MBM5_BRAFD Length = 1058 Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 79/641 (12%), Positives = 165/641 (25%), Gaps = 80/641 (12%) Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 ++++RP P ++ P E ++ L + + D+ V+ + + Sbjct: 335 PAESRRPRAPRPGALVTLRAQDPLDEARLIGSALRDLHHR-EGVQYDDMAVVCRSGAAVA 393 Query: 420 PFIQAVFGSAPADRYLPYAISDR-RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 + LP + R + + P + + +L + + + + L + Sbjct: 394 DL-----ADLLSRTGLPVRVPRRPQPLREVPAIADLLRILEIGLAPQDA-PLDPRLATEL 447 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 L F + LR R G + L R L+ + Sbjct: 448 LRGPFG-DADTLRLRRIRRLLLGAHR----------AAEPDSETPSEQLLARALVDEEVP 496 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC------R 592 LP E+ A + + ++ + AQ+ W R Sbjct: 497 G--------LPAPEARDRAAAPIHRVREMIRAVREHPEADAQQVLWHAWNASGLAGGWRR 548 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA--VPLSLLRDE-LAQRLDQER 649 L + D + A L L+ ++ Sbjct: 549 AALGSAGDVDGARSRLAASRLDALLELFAAAERLTDRRPGAGALELVEQIRGQAVVEDTL 608 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP-RQLAPLGFDLMSQKPKRGDR-- 706 G + + T + V L + +G +P +L F + + G R Sbjct: 609 APAAAARGRLAVLTPAQLAGEHRDTVVLARLQEGAWPDLRLRSTLFGAAELQLRAGARRG 668 Query: 707 ----------------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 D+ L + AL A++++ ++ + + PS L + Sbjct: 669 AELPIEPEAVRALQREQVIADELRLAVSALARARRRVLVT-----AVQDEQNEPSALFEA 723 Query: 751 LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA-----RE 805 + + + DPQ + A Sbjct: 724 FEGMAADPWIDLETLRRDPGPAPDARRLVAALRRRLRGEDPQTVRDAALALDALGRAGAP 783 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 + S P + L+R P + Sbjct: 784 GTDPGRWYHQEPSSTAPLHEDDTPIRLSPSALERAVDCPQSWLMERAGGTR--------- 834 Query: 866 DTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYG---AFGEIFWETQCQ 922 P L G + + + Q ++ D E L G G Sbjct: 835 AGGPAQLIGTALHHLAQ--VHPRGPADAEEDLLAELHTLLRAVPGTETWSGRRRVRRAED 892 Query: 923 EMQQLADRVIACRQPGQ-SMEIDLACNGVQITGWLPQVQPD 962 + LA + + +P ++ VQ+ G + +++ D Sbjct: 893 AARLLAAHLRSAGEPLAVEAPFEVELGRVQLRGSIDRIEGD 933 >UniRef50_Q12XW1 DNA helicase, ATP dependent n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12XW1_METBU Length = 587 Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 59/168 (35%), Gaps = 25/168 (14%) Query: 566 SLLMQLNIWRRGLAQERP-LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 L+ L + L + +++ L RD L + E I + Sbjct: 442 ELVQNLILLVTELHDDGSNIKQKLESFRDTLT--VNDENEKNMIFNDITEILNHW---HN 496 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 A+ D L ++ +A + + + T+ M+ F +V ++GM+D Sbjct: 497 YAKKTDNKSLHQFKNAMALG----KTHPLTQHSGITLSTVHTMKGQEFDIVFIIGMDDET 552 Query: 685 YP--RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 +P R + G +L+ ++ A A++ LY++ Sbjct: 553 FPDYRAVRSGGIELI-------------QEKNNLYVAFTRAKRFLYVT 587 >UniRef50_B3ERL2 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ERL2_AMOA5 Length = 969 Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 12/163 (7%) Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQ----YGDAVPLSLLRDELAQRLDQER--ISQR 653 +A+ ++++ L E+ +I + Q V + Q + + ++ Sbjct: 462 QLEAQEDSSLALEEEALGELIKQLSYIQVIITPLYKVSIERFIQLFRQLIRSLQLTFKEK 521 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF---DLMSQKPKRG-DRSRR 709 A + I + ++ FK V ++GMN+G P A F +L D + Sbjct: 522 TSAKGIQILRIWETANLDFKYVFIVGMNEGNLPASTAQGSFIPYNLRKGYGLPTMDIFQA 581 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 D Y F L AQQ +YI+Y S N + S + +L+ Sbjct: 582 TLDAYYFYRLLQRAQQ-VYITYNTPSSATN-PKEVSRYLWQLL 622 >UniRef50_A5FWN2 UvrD/REP helicase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FWN2_ACICJ Length = 639 Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 72/222 (32%), Gaps = 26/222 (11%) Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE-EWLP 589 +L A S + ++G ++ LA ++L R + WLP Sbjct: 434 ILAAEARSSDASLLEYWALAANNAG--NDIASSLAEFALRLVQSRSTWRKVVSEAIAWLP 491 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 D N E A Q + + +G + L Q + Sbjct: 492 QTADSSNGIISDAEEDRTAWETAAQAIR--VEKGSQPDLDE----------LLQGIALRP 539 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 V + T+ + + F+ V + G+ + + P + + Sbjct: 540 KEPPLDPSAVRLLTIHAAKGLEFEYVWVTGVAEQILPSWQSLKAG---------ASPAEL 590 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 +++R F A+ Q++L +++ + +R PS + E+ Sbjct: 591 EEERRNFFVAVTRTQKQLVLTHAAQ--YRGWQRQPSRFLAEM 630 >UniRef50_C6W0I6 Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W0I6_DYAFD Length = 968 Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 55/409 (13%), Positives = 124/409 (30%), Gaps = 58/409 (14%) Query: 582 RPLEEWLPVCRDMLNAF-FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 R + + + R++ + + E + +Q++ I E + L L+ Sbjct: 453 RSFYQLIELLREVYKDYKNALETEYLYLFYTLLKQFEQTIEERAEL-----ITLRTLKSF 507 Query: 641 LAQRLDQERIS-QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 + + + Q RI + I ++ R++ F+ + +L +N+GV P+ Sbjct: 508 MFELIRQTRIPFSGEPVSNLQIMGMLETRALDFERIIILSVNEGVIPQAKRQNSLIPFDA 567 Query: 700 KPKRGDRSRRDDD---RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 G + + + Y F L A + + E+ S V+++ + Sbjct: 568 AQAVGLPTHQHQEAVMSYHFYRLLQRASEVHILYTSTNDAPGGGEK--SRFVRQIEYELA 625 Query: 757 QSHYL----------------PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 Q + L +E ++ D++ P + Q Sbjct: 626 QYNPLIRIENKTVVFEAQARQELEEVVHKDDALIAAIRAYLDGKGIYPTHLNEFIRCSMQ 685 Query: 801 SYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTE 860 Y + + + + L ++ L+ F L + E Sbjct: 686 FYLKHIAGVKEKEEVEEELGMDKIGTWLHASLERLDLEFFL-----------LDKDPSEE 734 Query: 861 DSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQ 920 + E F + L + + LN + Q +++ R + Sbjct: 735 EIVQVLREEF--DRLFKGYVTNLGLNRIYYQIGEQQILTFLR-------HHMAQKPRRQI 785 Query: 921 CQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ--PDGLLRW 967 Q L R+ Q V++ G + +++ DG+L Sbjct: 786 LAAEQPLHTRIQLVLQGA--------FTPVRLGGKIDRIELGEDGILYV 826 >UniRef50_Q24FH4 UvrD/REP helicase family protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q24FH4_TETTH Length = 1021 Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 48/139 (34%), Gaps = 30/139 (21%) Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA--------------- 656 + Q + II++ PL + L + ++ + +++ Sbjct: 279 LYNQNEEIISQIKTILCSTNQPLKFFEEALEKHNEKSSLKLNYMSMIGNNSSIYGGKTNQ 338 Query: 657 ------GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 + + T+ + + +KVV +G+ND +P + ++ R + Sbjct: 339 SELLKQDRITLSTIHRAKGLEWKVVFFIGVNDEFFPNNFLRDPSNSLT---------RLE 389 Query: 711 DDRYLFLEALISAQQKLYI 729 + R LF A +LY Sbjct: 390 ECRRLFYVGATRAINELYF 408 >UniRef50_C7M8K3 Putative uncharacterized protein n=2 Tax=Capnocytophaga RepID=C7M8K3_CAPOD Length = 909 Score = 66.6 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 80/533 (15%), Positives = 166/533 (31%), Gaps = 105/533 (19%) Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + + HS +L+ P +++AD + P +QAV + Sbjct: 277 SINQAHSVAE-----------LLKNTPAKALEKTALIIADENLLIPVLQAVQPKTSVN-- 323 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSR-FVSEDVLALLDVPVLAARFDITEEGLRYL 493 I+ Q P+ + F++ L S+ F +D+L LL P L + EE +R++ Sbjct: 324 ----ITMGYPLQQTPLNDLFVAYFRLHLSKSFYHKDILNLLSQPFLHTL--LKEEVVRHI 377 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 Q++ H + + L E+ + P + Sbjct: 378 SQYI----------------------KTHNLTYITRKKLFESVDETEHEMLSLLFPDAKG 415 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 LI L+ + +L+ +L + L + E + Sbjct: 416 KALIITLIDNAITLIYRLKAQIDPESNTHLLTQ-----------------EYAYRFFQLF 458 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 Q + + + + D L + L G + + ++ RS+ F+ Sbjct: 459 NQLKQLQEQYGYIDSVKTL-YHFYLDVLQK--SSLNFRGEPLEG-LQVMGVLESRSLDFE 514 Query: 674 VVCLLGMNDGVYPRQLAPL---GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 V + +N+GV P + +D+ + + R Y F L A+Q +++ Sbjct: 515 RVIITSVNEGVLPLGKSDNSLIPYDVKYELELPTYKERDAVYSYNFYRILQRAKQ-VHLF 573 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 Y + + S + +L+ E + + ++KA P + Sbjct: 574 Y-DTEMNSLKSKEKSRFILQLL-----------AEKIPTHKVVHQIKAPEVYPAVLRPIN 621 Query: 791 PQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQ 850 K + + L + + L + +P+ + Q Sbjct: 622 -----------------------IKKTTSVIDALKALAEKGISPSALTTYIRNPLTFYEQ 658 Query: 851 MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRA 903 LQV E E + F G + I + L + + E ++ + Sbjct: 659 QVLQVYEEKEVEETVEARTF---GNIVHGILEDLYTPFLNEILTEEHIKKMQL 708 >UniRef50_B5EW84 ATP-dependent DNA helicase Rep n=1 Tax=Vibrio fischeri MJ11 RepID=B5EW84_VIBFM Length = 762 Score = 66.6 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 48/392 (12%), Positives = 126/392 (32%), Gaps = 54/392 (13%) Query: 376 FHVCH-SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA------DIDSYSPFIQAVFGS 428 F C+ + +E + +++LA+ + + P++I ++ ++++Y Sbjct: 365 FVTCYENEDQEAHNIVNKILALKAD--GIAPQNIGILYRFNKLGQNMENY---------- 412 Query: 429 APADRYLPYA-ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 R + Y I + + P + + L L + + + + F +T Sbjct: 413 -LISRGVSYRRIGNDKGLYEEPDIRDIVIYLHLIFNPYSIKAIRCFFAS---FIEFGVTT 468 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML---------LGYAME 538 E L + G + + + + + + + L+R+L Sbjct: 469 EALNSAIKSFQGRGDKRINNHQLLSFIVERGICKPSTKEHLSRVLKIIMHCSGLSSRITS 528 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 Y + V L Q R ++E + + Sbjct: 529 FDSYCRSVNEQYTNMPSDHCKAVEK--RLQEQFWGAVRDF-----VKELSTIYVEQYKYM 581 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR--LDQ-ERISQRFL 655 F A+ + + + + A Y + + + L + R LD+ + Sbjct: 582 FYSQADQQKRLKMSRELATKHYHLIFNACYDEELSETNLTQYICTRPLLDKVTKKDDEEN 641 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 + + T+ + + + + ++G ++ + + + + +++ L Sbjct: 642 TTDIELMTIHASKGLEKEAIFIIGCSEESW-----------WKESDIKAGTDKYEEELRL 690 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 F AL A + L+ +Y N+E+ + L Sbjct: 691 FYVALTRAIEHLFFTYSATRSFRNTEQPCNPL 722 >UniRef50_B1GZD6 Putative uncharacterized protein n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZD6_UNCTG Length = 933 Score = 66.6 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 67/468 (14%), Positives = 143/468 (30%), Gaps = 85/468 (18%) Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR---- 464 V+V D S +Q+V Y +S + PV +++ SR Sbjct: 291 AVIVPD----SKMLQSVISEISIVTD-RYNVSAGYPAEKTPVFSLLNAIIEAQLSRKGEY 345 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + S+DV+ +L P++ + E + + E A Q++ Sbjct: 346 YYSKDVMKVLTNPLVKNMEFLGESSISRTAVYKIE-----------------EALNQYSG 388 Query: 525 RFGLTRMLLGY--AMESAQGEWQSVLPYDESSGLIA--ELVGHLASLLMQLNIWRRGLAQ 580 RM + + + Q + L +E A E++ L + + Sbjct: 389 NCLSGRMFVAFKEIIGEKQIIDEISLAVNEVWEYTAPEEIMKMLKEIFDVFFTSWEKIE- 447 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR-- 638 L + ++L + ++ + ++ V + + Sbjct: 448 --TLNNLSYILSELLEKIYSLSVAANYSLNA---EATELLLSLAKELKFGEVSQAKFQNE 502 Query: 639 DELAQRLDQERISQRFLAG----PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 D L + + L G + I L+ R++ F+ V ++GM D P Sbjct: 503 DVLNTFKKLIKNKRIVLPGSPLKGLQILGLLESRNLSFENVFIVGMIDSAIPAVKKEYSL 562 Query: 695 ---DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 D+M + + +Y F + LIS + L + Y DN + S ++ L Sbjct: 563 IPKDIMYALGIEIAKKELEIQQYHF-DRLISGAKNLNLIYP-----DNDKDERSRFIESL 616 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAH-LTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 I + N D + ++ L + P + + + + Y + Sbjct: 617 I---------WNKQFENKDINIVKINKFVLPKFLAKQPAKRKYAKTKKIREYLKNMSYTH 667 Query: 811 SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFR 858 + + + ++ +F L ++ R Sbjct: 668 ------------------------SKIDAYLSCKLKFYFMHVLILDER 691 >UniRef50_Q04AN7 ATP-dependent helicase/nuclease subunit A n=3 Tax=Lactobacillus RepID=ADDA_LACDB Length = 1227 Score = 66.6 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 50/364 (13%), Positives = 102/364 (28%), Gaps = 93/364 (25%) Query: 399 EDPTLTPRDIIVMVA----DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 + ++ DI ++ ++D I+ F +P + D + L Sbjct: 569 QTRPVSYGDIAILTRSKTSNLD-----IKQEFDRYG----VPLFVMDVQNYFQTFELTVI 619 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 +S L + D+ ++A+L P+ F+ + L +R Sbjct: 620 MSYLKIIDNPDQDIPLVAVLRSPI----FNFSSSDLAEIR-------------------- 655 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 ++ L YA + L L QL Sbjct: 656 --LVNKSVSFYAALR----TYAKKDTD------------------LAARCRDFLAQLQDL 691 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 R + + E L + + + A T + A+ + L Sbjct: 692 RD-FSLSHRISELLWTIYERTSFLEIVTAMTNGQQRRL--NLTALYERASAYESSGFKDL 748 Query: 635 SLLRDELAQRLDQERISQRF-----LAGPVNICTLMPMRSIPFKVVCLLGMNDG------ 683 + +A+ ++ + V + T+ + + F VV +LG+ Sbjct: 749 YQFINFIARMRKNQKDLAQPILSENAGNSVKLMTIHASKGLEFPVVFVLGLEHRYNYQQD 808 Query: 684 ----------------VYPRQLAPLGFDLMSQ--KPKRGDRSRRDDDRYLFLEALISAQQ 725 YP A D ++ + +++ L AL A+Q Sbjct: 809 ITGSYVLDASGLGLSFAYPFDEAEYRADTLANAWLKIAKKKKLLEEEARLLYVALTRAKQ 868 Query: 726 KLYI 729 KL + Sbjct: 869 KLIL 872 >UniRef50_C2YFF5 ATP-dependent DNA helicase rep n=2 Tax=Bacillus RepID=C2YFF5_BACCE Length = 608 Score = 66.6 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 69/228 (30%), Gaps = 27/228 (11%) Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 W + + + L + + E L +L Sbjct: 387 LWLRSCALWLVNPTSQSFTEIVNFWIQLLKNETKHFSDEETLM-LQKKLYTILEDSKKYA 445 Query: 603 AETEAAMTLIEQQWQ--AIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERISQ----RFL 655 +T +EQ+ I+ E + + L L++ +SQ Sbjct: 446 ENLNDWLTYLEQELNLAQILNESV-TYLDENKYLETLKNYAQSGSFQGYNLSQFSQIGKP 504 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 V + T + + F+VV +LGM GV+P ++ +++R + Sbjct: 505 KDQVTLSTRHSSKGLEFEVVIMLGMEKGVFPYYKNERN------------SAKLNEERRV 552 Query: 716 FLEALISAQQKLYISYIGRSIQDNS------ERFPSVLVQELIDYIGQ 757 F L A++ Y+ + + + PS+ EL + Sbjct: 553 FFVCLTRAKRICYLLRSKKYTRKTRNGIITFDHKPSMFWNELYEVCEN 600 >UniRef50_C1RM19 DNA/RNA helicase, superfamily I n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RM19_9CELL Length = 631 Score = 66.6 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 55/188 (29%), Gaps = 19/188 (10%) Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF---LPDAETEAAMTLIEQQWQAIIA 621 + + R A P E+ V +L + A +A+ + Sbjct: 392 RREVAHVRALLREHAARTPDEDAADVLGQVLARVGHDPDAPPDGTGAARERWDALEALRS 451 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 + L +L +R ++ G V + T+ + + + V + Sbjct: 452 LVATLPAALTGTVRALSADLDRRAAED--HAPPGRGAVTVSTIHKAKGLEWDAVVVARAT 509 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 +G P A + ++R L A+ A++ L ++ G + Sbjct: 510 EGSLPSVYATTS-------------AETAEERRLAYVAVTRARRHLVATWAGAR-RGGRA 555 Query: 742 RFPSVLVQ 749 S + Sbjct: 556 NTASPYLS 563 >UniRef50_Q1WRS0 ATP-dependent helicase/nuclease subunit A n=3 Tax=Lactobacillus RepID=ADDA_LACS1 Length = 1248 Score = 66.6 bits (161), Expect = 6e-09, Method: Composition-based stats. Identities = 70/595 (11%), Positives = 157/595 (26%), Gaps = 129/595 (21%) Query: 385 EVEVLHDRLLAMLEEDP-----------TLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 ++ + R+ ++E + RDI ++ + + Sbjct: 552 QIVMTAKRIKELVENGEKIYDKKQGTIRPIEYRDIAILAPTRKN-----NLILTEEFKRL 606 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P + D + L+ +S L + D+ + ++A+L P++ + E L YL Sbjct: 607 GVPIFVPDAQNYFQTTELKIMMSFLQIIDNPYQDIPLVAVLRSPIV----GLKENELAYL 662 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R + + + +++ Sbjct: 663 R----------------------INDKTGDYFQAVE-------------SFYDNFEVEKA 687 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEE-WLPVCRDMLNAFFLPDAETEAAMTLI 612 S L +A L QL +R Q W + + Sbjct: 688 SAFAQSLYEKIAIFLKQLTEFRNMAQQNELASLIWKIYEETGFLDYVGGMPGGLQRQANL 747 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERISQRFLAGPVNICTLMPMRSIP 671 AE + +++ + D + + V + T+ + + Sbjct: 748 H-ALYERAAEYEEMSFKGLFQFVRFINKMQTKNKDLSEATTQVSDDAVTVMTIHGSKGLE 806 Query: 672 FKVVCLLGMND----GVY------------------PRQLAPLGFDLMSQKPKRGDRSRR 709 F VV LL G P + K+ + Sbjct: 807 FPVVFLLDATHKFNVGDLNKPYLLNADDGIGISYLDPDTRVKTDTLMKVIAGKQALKKLA 866 Query: 710 DDDRYLFLEALISAQQKLYI--SYI----GRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 + L AL A+Q+L+I SY S + + S+++ I ++ Sbjct: 867 AEQMRLLYVALTRAEQQLFIVGSYKDKNEALSKWKKATQSESLVLNAGIRASVRNFMDWI 926 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 L E V + Y + ++ G+ + Sbjct: 927 GMCLTRSEIFKEVDDTVDAKEP-------EYIGELPVKFEVKFYSNQDLRGENITLDENS 979 Query: 824 LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 ++ + +L+ +I + EP + +Y+I + Sbjct: 980 ----------------------ESWLKQQLK--------KIEEQEPLEIND-KQYRIIDK 1008 Query: 884 LLNALVEQDDAERLFRR-----FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA 933 +L + + + + A D P + ++ Q +R + Sbjct: 1009 ILQSKYPNESLAKTTAYQAVSDLKRAFDDPDNNMMQSLEIDWQDQVPQGINRYVQ 1063 >UniRef50_B5RLS9 DNA helicase n=24 Tax=Borrelia RepID=B5RLS9_BORDL Length = 698 Score = 66.2 bits (160), Expect = 8e-09, Method: Composition-based stats. Identities = 53/451 (11%), Positives = 130/451 (28%), Gaps = 96/451 (21%) Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV-FGSAPADRYLPYAI 439 +P E E + L+ + L + V+ Y Q++ F A + + I Sbjct: 320 NPTEEAEYFANFLI-----ENKL---ETAVL------YRFNHQSLQFEKAFFKNNIAHKI 365 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 ++ ISLL L ++ L +++ P + + + + +N+ Sbjct: 366 LGSIRFYEREEIKDVISLLRLFVNKKDKVSFLRIINKPA----RGLGKTTIDKIIATLND 421 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 + + + + + G + Sbjct: 422 TDVNLDLMLASRKV------------------------------------VKNLKGKARD 445 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 + SL +L + + + + + + Sbjct: 446 SLDIFLSLYDELKENIQK--------GIYVNLSEFIKDVTMGFGIWNYYQKFDKDEKSKN 497 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 I E + + + L L + A V + ++ ++ + F V + G Sbjct: 498 IDELISSGVEYSGSFEGLVIFLENS-SLSPLVHGDFASSVLLSSIHGVKGLEFDRVIISG 556 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 + G+ P ++ L D R +++R LF A+ A+ +L+I+ + Sbjct: 557 LEKGLLPAEIEELTAD------------RLEEERRLFYVAITRAKFELFITINLQRFFRG 604 Query: 740 --SERFPSVLVQEL----------IDYIGQSHYLPGDEALNCDESEARVKAH-----LTC 782 SV QE+ +Y+ + + N + + + + Sbjct: 605 ILKNTAISVFFQEIHKDNYDIVFVPEYLKDNFKFFFTRSDNKNFNIGDYIIYNGENGIIV 664 Query: 783 LHTRM---PFDPQNYQPGERQSYAREWLPAA 810 PF + + G++ + ++ Sbjct: 665 DKWYQDGGPFLKISLKNGKKAILSSSYIKKL 695 >UniRef50_Q23JB9 UvrD/REP helicase family protein n=2 Tax=Tetrahymena thermophila SB210 RepID=Q23JB9_TETTH Length = 829 Score = 65.8 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 59/173 (34%), Gaps = 14/173 (8%) Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 Q + + + + +P + + + A + I T + + +KV Sbjct: 333 QVELFLQKYNYFEPETEIPFWSFI----GKSKEFGYKYEYQADKIMILTGHKSKGLQWKV 388 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V +GM D ++P L + + ++ ++ + LF Q LYISYI Sbjct: 389 VFEVGMEDNLFPLSF------LRKTEHDLDEFNKVEELKRLFYVMSTRTSQFLYISYISH 442 Query: 735 SIQDNSERFPSVLVQEL----IDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 + D + + I+ IGQ+ P + + +L Sbjct: 443 NNNDQLNYQACRFLNAIDKNKINIIGQARIYPDTKDSIYINEQQLQSLYLLFE 495 >UniRef50_A3VPE1 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VPE1_9PROT Length = 1015 Score = 65.8 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 43/357 (12%), Positives = 93/357 (26%), Gaps = 43/357 (12%) Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 L + + + R L G +WQ G LL L+ Sbjct: 456 GLTRSDKERLARRVDRRLRGM----RPRDWQDTQRRLAGEGPSPLE----TELLQDLDAA 507 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT-LIEQQWQAIIAEGLGAQYGDAVP 633 R E L ++ + F + + A ++ + + P Sbjct: 508 LRAFQAATTQHERLRALIEIADRFARSADGDQLLWQDQDGEALAAQLSAMMQTAFLPDCP 567 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 + L I + + L+ R V L G+ +G +P+ Sbjct: 568 PAAFASLFEALLGSAVIRTYGTHPRLTVLGLVEARLQSADRVILAGLTEGTWPKLTTADP 627 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALISA-QQKLYISYIGRSIQDNSERFPSVLVQELI 752 F + + G + + L+ + A +++ + +S + PS + L Sbjct: 628 FLPHNVRLALGLPTHDAEVGRSALDFVDHALGEEVILIRSEKSDRG--PALPSRWLTRLY 685 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 + I + + H + +P Sbjct: 686 NLIEAAKQTEATDITGRLRGWVGALRHPASVDPALP------------------------ 721 Query: 813 AGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTE-DSEIPDTE 868 +P LP + + + + P + + L++ E + E Sbjct: 722 ------PMPRPAAALLPARLSVSDIGQLIRDPYSVYARRLLRLFPLDPLAQEPAERE 772 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P07648 Exodeoxyribonuclease V gamma chain n=185 Tax=cel... 1040 0.0 UniRef50_C4K849 Exonuclease V, gamma chain with recB and recD: 5... 925 0.0 UniRef50_A6FE97 Putative exodeoxyribonuclease V n=1 Tax=Moritell... 920 0.0 UniRef50_D0ICS0 Exodeoxyribonuclease V gamma chain n=1 Tax=Grimo... 916 0.0 UniRef50_B6EGE9 Exodeoxyribonuclease V gamma chain n=1 Tax=Aliiv... 893 0.0 UniRef50_A1SUW0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ps... 891 0.0 UniRef50_Q2BKD9 Exodeoxyribonuclease V, 125 kDa subunit n=2 Tax=... 888 0.0 UniRef50_C9PLM5 Exodeoxyribonuclease V gamma chain n=5 Tax=Gamma... 878 0.0 UniRef50_A4SSU8 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ae... 847 0.0 UniRef50_A5GC93 DNA helicase/exodeoxyribonuclease V, gamma subun... 841 0.0 UniRef50_C4L7B2 Exodeoxyribonuclease V, gamma subunit n=1 Tax=To... 837 0.0 UniRef50_B8CMV5 Exodeoxyribonuclease V, RecC subunit n=1 Tax=She... 830 0.0 UniRef50_A3QEU7 Exodeoxyribonuclease V, gamma subunit n=4 Tax=Sh... 822 0.0 UniRef50_Q080D9 Exodeoxyribonuclease V, gamma subunit n=6 Tax=Sh... 821 0.0 UniRef50_A6W0B0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ma... 818 0.0 UniRef50_B8E565 Exodeoxyribonuclease V, gamma subunit n=8 Tax=Sh... 815 0.0 UniRef50_A1AQY6 DNA helicase/exodeoxyribonuclease V, gamma subun... 812 0.0 UniRef50_Q3IJ13 Exonuclease V, gamma chain with recB and recD: 5... 811 0.0 UniRef50_Q1LST9 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ba... 810 0.0 UniRef50_Q2LTC9 Exodeoxyribonuclease V gamma chain n=2 Tax=Bacte... 807 0.0 UniRef50_Q65UM5 RecC protein n=9 Tax=Gammaproteobacteria RepID=Q... 805 0.0 UniRef50_A1S6U9 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Sh... 799 0.0 UniRef50_Q3ASJ4 DNA helicase/exodeoxyribonuclease V, gamma subun... 795 0.0 UniRef50_Q15V11 DNA helicase/exodeoxyribonuclease V, gamma subun... 794 0.0 UniRef50_Q9CM76 RecC n=1 Tax=Pasteurella multocida RepID=Q9CM76_... 791 0.0 UniRef50_A8ZX08 Exodeoxyribonuclease V, gamma subunit n=1 Tax=De... 787 0.0 UniRef50_C0N788 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Me... 782 0.0 UniRef50_Q12LP5 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ba... 780 0.0 UniRef50_Q3B473 DNA helicase/exodeoxyribonuclease V, gamma subun... 771 0.0 UniRef50_P44945 Exodeoxyribonuclease V gamma chain n=21 Tax=Haem... 767 0.0 UniRef50_Q7NQR0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ch... 754 0.0 UniRef50_Q2SQD5 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ha... 743 0.0 UniRef50_A1TWK1 DNA helicase/exodeoxyribonuclease V, gamma subun... 743 0.0 UniRef50_C0QI08 RecC n=1 Tax=Desulfobacterium autotrophicum HRM2... 739 0.0 UniRef50_D2BZV3 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ga... 738 0.0 UniRef50_A4JS85 DNA helicase/exodeoxyribonuclease V, gamma subun... 736 0.0 UniRef50_A3JIN1 Exodeoxyribonuclease V gamma chain n=2 Tax=cellu... 733 0.0 UniRef50_A6VQ90 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ac... 732 0.0 UniRef50_B9CWC7 Exodeoxyribonuclease V gamma chain n=2 Tax=Actin... 731 0.0 UniRef50_Q1N2R1 Exonuclease V gamma subunit n=1 Tax=Bermanella m... 730 0.0 UniRef50_Q7VRF1 Exonuclease V, subunit n=2 Tax=Candidatus Blochm... 730 0.0 UniRef50_B0BTG3 Exodeoxyribonuclease V, gamma subunit n=8 Tax=Pa... 722 0.0 UniRef50_B8FB93 Exodeoxyribonuclease V, gamma subunit n=1 Tax=De... 720 0.0 UniRef50_C1DMH2 Exodeoxyribonuclease V, gamma subunit n=18 Tax=G... 718 0.0 UniRef50_Q0VNI2 Exodeoxyribonuclease V gamma chain n=3 Tax=Gamma... 714 0.0 UniRef50_C5S7Q0 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Al... 714 0.0 UniRef50_Q5QUQ7 Exonuclease V gamma subunit n=2 Tax=Idiomarina R... 706 0.0 UniRef50_C6MAC3 Exodeoxyribonuclease V, gamma subunit n=3 Tax=Ne... 706 0.0 UniRef50_D0KY94 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ha... 705 0.0 UniRef50_C1D6T7 RecC n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 700 0.0 UniRef50_A4VRQ6 Exodeoxyribonuclease V gamma chain n=1 Tax=Pseud... 700 0.0 UniRef50_A1KVC5 Exodeoxyribonuclease V n=23 Tax=Neisseria RepID=... 699 0.0 UniRef50_C7LVF8 Exodeoxyribonuclease V, gamma subunit n=1 Tax=De... 697 0.0 UniRef50_C5JAU6 DNA helicase/exodeoxyribonuclease V, gamma subun... 690 0.0 UniRef50_C5TL47 Exodeoxyribonuclease V, gamma subunit n=3 Tax=Ne... 684 0.0 UniRef50_C7I4N7 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Th... 676 0.0 UniRef50_C8R0F3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=De... 672 0.0 UniRef50_Q1QYD4 DNA helicase/exodeoxyribonuclease V, gamma subun... 666 0.0 UniRef50_D0IXL5 Exodeoxyribonuclease V, gamma subunit n=4 Tax=Co... 664 0.0 UniRef50_Q480N8 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Co... 662 0.0 UniRef50_C1SHH5 Exodeoxyribonuclease V, gamma subunit n=1 Tax=De... 656 0.0 UniRef50_B5JRL4 Exodeoxyribonuclease V, gamma subunit n=1 Tax=ga... 654 0.0 UniRef50_Q60AZ6 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Me... 654 0.0 UniRef50_C4ZM87 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Th... 653 0.0 UniRef50_C3X2X1 Exodeoxyribonuclease V n=2 Tax=Oxalobacter formi... 641 0.0 UniRef50_P57528 Exodeoxyribonuclease V gamma chain n=4 Tax=Buchn... 634 e-180 UniRef50_Q1NSB7 Exodeoxyribonuclease V, RecC subunit n=3 Tax=Pro... 631 e-179 UniRef50_A4B914 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Re... 629 e-178 UniRef50_B4RTM0 Exodeoxyribonuclease V, gamma subunit n=3 Tax=Al... 627 e-178 UniRef50_A1SDB1 DNA helicase/exodeoxyribonuclease V, gamma subun... 626 e-177 UniRef50_B1XZ24 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Le... 625 e-177 UniRef50_A1KCB8 DNA helicase, ATP-dependent dsDNA/ssDNA exonucle... 622 e-176 UniRef50_B5JHV1 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ve... 618 e-175 UniRef50_Q6ANK2 Related to exodeoxyribonuclease V, gamma chain n... 617 e-175 UniRef50_B0TXZ0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Fr... 616 e-174 UniRef50_B5EPU5 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ac... 609 e-172 UniRef50_Q14GK3 Exodeoxyribonuclease V gamma chain n=16 Tax=Fran... 607 e-172 UniRef50_UPI0000E0F593 exodeoxyribonuclease V, gamma subunit n=1... 603 e-170 UniRef50_D2PR48 Exodeoxyribonuclease V, gamma subunit n=12 Tax=A... 602 e-170 UniRef50_D1N1Q2 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Vi... 599 e-169 UniRef50_C0ZQ87 Exodeoxyribonuclease V gamma chain n=6 Tax=Coryn... 595 e-168 UniRef50_A6DNF3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Le... 592 e-167 UniRef50_C8XGX0 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Na... 589 e-166 UniRef50_A1V2S0 Exodeoxyribonuclease V, gamma subunit n=90 Tax=c... 583 e-164 UniRef50_C7PDT3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ch... 579 e-163 UniRef50_A9BB00 Possible exodeoxyribonuclease V subunit C 125 kD... 578 e-163 UniRef50_C1ACJ2 Exodeoxyribonuclease V gamma subunit n=1 Tax=Gem... 572 e-161 UniRef50_P96921 Exodeoxyribonuclease V gamma chain n=23 Tax=Myco... 571 e-161 UniRef50_C6NU56 Exodeoxyribonuclease V gamma chain n=1 Tax=Acidi... 565 e-159 UniRef50_Q8D2T9 RecC protein n=1 Tax=Wigglesworthia glossinidia ... 565 e-159 UniRef50_D2U882 Probable exodeoxyribonuclease v, gamma chain pro... 563 e-158 UniRef50_Q7VBK2 Exonuclease V gamma subunit n=1 Tax=Prochlorococ... 562 e-158 UniRef50_Q3BM39 Exodeoxyribonuclease V, gamma chain n=19 Tax=Xan... 562 e-158 UniRef50_Q89AB4 Exodeoxyribonuclease V gamma chain n=1 Tax=Buchn... 555 e-156 UniRef50_A2C3H2 Possible exodeoxyribonuclease V subunit C 125 kD... 553 e-155 UniRef50_C4GHY2 Putative uncharacterized protein n=1 Tax=Kingell... 549 e-154 UniRef50_UPI0001C32181 exodeoxyribonuclease V, gamma subunit n=1... 544 e-153 UniRef50_C6HV34 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Le... 542 e-152 UniRef50_D0L8X4 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Go... 532 e-149 UniRef50_A2C8A0 Possible exodeoxyribonuclease V gamma chain n=4 ... 531 e-149 UniRef50_A5GLW8 Exodeoxyribonuclease V gamma chain n=4 Tax=Synec... 517 e-144 UniRef50_A3ETY6 Putative exodeoxyribonuclease V, gamma subunit n... 512 e-143 UniRef50_Q3AJ30 Exodeoxyribonuclease V, gamma subunit n=5 Tax=Sy... 509 e-142 UniRef50_Q05XZ7 Possible exodeoxyribonuclease V gamma chain n=1 ... 507 e-142 UniRef50_A6W6P1 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ki... 503 e-140 UniRef50_Q6FF17 Exonuclease V, gamma chain n=3 Tax=Acinetobacter... 503 e-140 UniRef50_B2I2P5 Exonuclease V gamma subunit n=14 Tax=Acinetobact... 498 e-139 UniRef50_D0SSR5 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ac... 492 e-137 UniRef50_A5GU99 Exodeoxyribonuclease V gamma chain n=1 Tax=Synec... 460 e-127 UniRef50_D1R7X4 Putative uncharacterized protein n=1 Tax=Parachl... 456 e-126 UniRef50_A2BX92 Possible exodeoxyribonuclease V subunit C 125 kD... 426 e-117 UniRef50_Q6MFB7 Putative exodeoxyribonuclease V gamma chain n=1 ... 417 e-114 UniRef50_A5EWC3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Di... 400 e-109 UniRef50_D0LXX8 Exodeoxyribonuclease V n=1 Tax=Haliangium ochrac... 382 e-104 UniRef50_C9RQA7 Exodeoxyribonuclease V RecC subunit n=1 Tax=Fibr... 352 4e-95 UniRef50_Q4FSM9 Possible exoribodeoxynuclease V, gamma subunit n... 345 4e-93 UniRef50_C8NCI0 Exoribodeoxynuclease V, gamma subunit n=1 Tax=Ca... 338 6e-91 UniRef50_B7JDU3 ATP-dependent helicase/deoxyribonuclease subunit... 337 1e-90 UniRef50_Q04UR0 Exodeoxyribonuclease V, gamma subunit n=4 Tax=Le... 334 1e-89 UniRef50_B6FV68 Putative uncharacterized protein n=1 Tax=Clostri... 334 1e-89 UniRef50_UPI00017899D8 ATP-dependent nuclease subunit B n=1 Tax=... 332 4e-89 UniRef50_C4G1J6 Putative uncharacterized protein n=1 Tax=Abiotro... 329 4e-88 UniRef50_C6JEU6 Putative uncharacterized protein n=1 Tax=Ruminoc... 328 6e-88 UniRef50_B1I494 ATP-dependent helicase/deoxyribonuclease subunit... 328 7e-88 UniRef50_C0GDI4 ATP-dependent nuclease subunit B n=1 Tax=Dethiob... 326 3e-87 UniRef50_B2A611 ATP-dependent helicase/deoxyribonuclease subunit... 325 6e-87 UniRef50_C0FS44 Putative uncharacterized protein n=2 Tax=Rosebur... 323 3e-86 UniRef50_A4J4E2 ATP-dependent helicase/deoxyribonuclease subunit... 322 6e-86 UniRef50_A1HTK8 UvrD-like DNA helicase, C terminal n=1 Tax=Therm... 322 7e-86 UniRef50_A5ZW43 Putative uncharacterized protein n=1 Tax=Ruminoc... 320 1e-85 UniRef50_A8RRN9 Putative uncharacterized protein n=1 Tax=Clostri... 320 2e-85 UniRef50_C6CTT5 ATP-dependent nuclease subunit B n=1 Tax=Paeniba... 319 4e-85 UniRef50_Q8ERW6 ATP-dependent helicase/deoxyribonuclease subunit... 318 7e-85 UniRef50_UPI00019738F1 ATP-dependent nuclease subunit B n=2 Tax=... 317 1e-84 UniRef50_B0TDI1 ATP-dependent helicase/deoxyribonuclease subunit... 315 6e-84 UniRef50_A7GAI7 ATP-dependent helicase/deoxyribonuclease subunit... 315 8e-84 UniRef50_B0NKJ8 Putative uncharacterized protein n=8 Tax=Clostri... 315 9e-84 UniRef50_UPI0001850BBB ATP-dependent nuclease, subunit B n=1 Tax... 310 3e-82 UniRef50_B8I2Y3 ATP-dependent helicase/deoxyribonuclease subunit... 309 3e-82 UniRef50_Q67MD4 ATP-dependent helicase/deoxyribonuclease subunit... 308 1e-81 UniRef50_A7BX05 Exodeoxyribonuclease V gamma chain n=1 Tax=Beggi... 306 3e-81 UniRef50_Q0SWW7 ATP-dependent helicase/deoxyribonuclease subunit... 306 4e-81 UniRef50_Q18AP0 ATP-dependent helicase/deoxyribonuclease subunit... 303 3e-80 UniRef50_A9KTE7 ATP-dependent helicase/deoxyribonuclease subunit... 302 7e-80 UniRef50_Q24WW7 ATP-dependent helicase/deoxyribonuclease subunit... 301 1e-79 UniRef50_C4Z990 AddB n=1 Tax=Eubacterium rectale ATCC 33656 RepI... 301 1e-79 UniRef50_B9XFA2 ATP-dependentnuclease subunitB n=1 Tax=bacterium... 300 3e-79 UniRef50_C6IZE2 ATP-dependent nuclease subunit B n=1 Tax=Paeniba... 299 3e-79 UniRef50_A4IKW6 ATP-dependent helicase/deoxyribonuclease subunit... 299 4e-79 UniRef50_B0KDB8 ATP-dependent helicase/deoxyribonuclease subunit... 298 8e-79 UniRef50_C6LH76 ATP-dependent nuclease subunit B n=1 Tax=Bryante... 297 1e-78 UniRef50_Q2RL78 ATP-dependent helicase/deoxyribonuclease subunit... 297 1e-78 UniRef50_A8VW70 Beta-lactamase n=1 Tax=Bacillus selenitireducens... 297 2e-78 UniRef50_C0Z546 ATP-dependent nuclease subunit B n=1 Tax=Breviba... 296 4e-78 UniRef50_C0CXR8 Putative uncharacterized protein n=2 Tax=Clostri... 295 9e-78 UniRef50_A6LPC3 ATP-dependent helicase/deoxyribonuclease subunit... 294 1e-77 UniRef50_C5RQN7 ATP-dependent nuclease subunit B n=1 Tax=Clostri... 294 1e-77 UniRef50_A8FBR0 ATP-dependent helicase/deoxyribonuclease subunit... 293 2e-77 UniRef50_UPI0001692BDC ATP-dependent nuclease, subunit B n=1 Tax... 292 5e-77 UniRef50_B7AS97 Putative uncharacterized protein n=1 Tax=Bactero... 292 5e-77 UniRef50_B0NWV1 Putative uncharacterized protein n=2 Tax=Clostri... 291 1e-76 UniRef50_A8STZ1 Putative uncharacterized protein n=1 Tax=Coproco... 291 1e-76 UniRef50_C0CPC7 Putative uncharacterized protein n=1 Tax=Blautia... 290 3e-76 UniRef50_D2LU04 ATP-dependent nuclease subunit B n=1 Tax=Bacillu... 289 5e-76 UniRef50_UPI0001BC38B0 ATP-dependent nuclease subunit B n=1 Tax=... 288 6e-76 UniRef50_B6G1B7 Putative uncharacterized protein n=1 Tax=Clostri... 288 1e-75 UniRef50_A0AL19 ATP-dependent helicase/deoxyribonuclease subunit... 286 3e-75 UniRef50_C7GAA1 ATP-dependent nuclease n=1 Tax=Roseburia intesti... 285 6e-75 UniRef50_B9E0C6 ATP-dependent helicase/deoxyribonuclease subunit... 285 7e-75 UniRef50_C9LAG6 ATP-dependent nuclease subunit B n=1 Tax=Blautia... 282 4e-74 UniRef50_C4G8W0 Putative uncharacterized protein n=1 Tax=Shuttle... 280 2e-73 UniRef50_B8DF43 ATP-dependent helicase/deoxyribonuclease subunit... 280 2e-73 UniRef50_D1BPP0 ATP-dependent nuclease subunit B-like protein n=... 277 2e-72 UniRef50_Q0AXV2 DNA helicase/exodeoxyribonuclease V, subunit B n... 275 9e-72 UniRef50_A6TVN9 ATP-dependent helicase/deoxyribonuclease subunit... 275 9e-72 UniRef50_C0EV12 Putative uncharacterized protein n=1 Tax=Eubacte... 271 1e-70 UniRef50_B1HN89 ATP-dependent helicase/deoxyribonuclease subunit... 270 3e-70 UniRef50_Q6A851 Exodeoxyribonuclease V gamma chain n=3 Tax=Propi... 269 5e-70 UniRef50_Q4L4Y2 ATP-dependent helicase/deoxyribonuclease subunit... 267 1e-69 UniRef50_Q057F6 Exodeoxyribonuclease V, g chain n=1 Tax=Buchnera... 266 4e-69 UniRef50_A5ZAT7 Putative uncharacterized protein n=1 Tax=Eubacte... 265 7e-69 UniRef50_C4FTG6 Putative uncharacterized protein n=1 Tax=Catonel... 265 8e-69 UniRef50_B1YKM7 ATP-dependent helicase/deoxyribonuclease subunit... 264 2e-68 UniRef50_A7VJ44 Putative uncharacterized protein n=1 Tax=Clostri... 260 2e-67 UniRef50_C9LQY6 Putative ATP-dependent nuclease subunit B n=1 Ta... 259 5e-67 UniRef50_C9KJP7 ATP-dependent nuclease subunit B n=1 Tax=Mitsuok... 258 8e-67 UniRef50_C4Z483 Putative uncharacterized protein n=1 Tax=Eubacte... 257 3e-66 UniRef50_C4V2E4 ATP-dependent deoxyribonuclease subunit B n=2 Ta... 255 1e-65 UniRef50_Q8CRT9 ATP-dependent DNA helicase pcrA n=245 Tax=cellul... 253 4e-65 UniRef50_C9LTM7 ATP-dependent nuclease subunit B n=1 Tax=Selenom... 249 6e-64 UniRef50_A8SJB4 Putative uncharacterized protein n=1 Tax=Parvimo... 249 6e-64 UniRef50_Q9K2F1 Exodeoxyribonuclease V, gamma subunit, putative ... 248 8e-64 UniRef50_A8SUE8 Putative uncharacterized protein n=4 Tax=Clostri... 248 1e-63 UniRef50_Q6GFF2 ATP-dependent DNA helicase pcrA n=81 Tax=cellula... 245 7e-63 UniRef50_Q03NA6 ATP-dependent helicase/deoxyribonuclease subunit... 245 8e-63 UniRef50_UPI00016C0037 ATP-dependent nuclease subunit B n=1 Tax=... 244 1e-62 UniRef50_C7H111 ATP-dependent DNA helicase PcrA n=1 Tax=Eubacter... 244 2e-62 UniRef50_B0PD61 Putative uncharacterized protein n=1 Tax=Anaerot... 243 2e-62 UniRef50_A6NVW2 Putative uncharacterized protein n=1 Tax=Bactero... 243 4e-62 UniRef50_Q3KL55 Exodeoxyribonuclease V gamma chain n=11 Tax=Chla... 243 4e-62 UniRef50_A8MLJ7 ATP-dependent DNA helicase PcrA n=3 Tax=Firmicut... 240 2e-61 UniRef50_A7VXI0 Putative uncharacterized protein n=1 Tax=Clostri... 240 2e-61 UniRef50_B8I5U1 ATP-dependent DNA helicase PcrA n=14 Tax=Firmicu... 240 2e-61 UniRef50_UPI00016C0C66 ATP-dependent DNA helicase PcrA n=1 Tax=E... 240 3e-61 UniRef50_B0SIS7 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Le... 239 5e-61 UniRef50_Q6MI36 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio ... 238 7e-61 UniRef50_C0WLM6 ATP-dependent deoxyribonuclease, subunit B n=3 T... 238 7e-61 UniRef50_C4Z8S4 ATP-dependent DNA helicase PcrA n=17 Tax=Firmicu... 238 9e-61 UniRef50_B0TWY9 DNA helicase II n=19 Tax=Francisella RepID=B0TWY... 237 2e-60 UniRef50_D2R9Y0 Putative ATP-dependent DNA helicase PcrA n=1 Tax... 236 4e-60 UniRef50_C5QUC7 Possible ATP-dependent DNA helicase PcrA (Fragme... 236 4e-60 UniRef50_C9XK50 ATP-dependent DNA helicase n=5 Tax=Clostridium R... 235 6e-60 UniRef50_C2EDG9 ATP-dependent deoxyribonuclease, subunit B n=1 T... 234 1e-59 UniRef50_C6A858 Superfamily I DNA and RNA helicase n=18 Tax=Bifi... 233 4e-59 UniRef50_Q836J9 ATP-dependent helicase/deoxyribonuclease subunit... 230 2e-58 UniRef50_Q04T79 ATP-dependent DNA helicase n=6 Tax=Leptospira Re... 230 2e-58 UniRef50_Q0TN58 ATP-dependent DNA helicase PcrA n=12 Tax=Clostri... 230 3e-58 UniRef50_D1CD72 UvrD/REP helicase n=1 Tax=Thermobaculum terrenum... 230 3e-58 UniRef50_C8W206 ATP-dependent DNA helicase PcrA n=2 Tax=Clostrid... 230 4e-58 UniRef50_Q2RGX9 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 229 4e-58 UniRef50_A8LAX0 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria... 229 4e-58 UniRef50_A9BDV1 UvrD/REP helicase n=44 Tax=Cyanobacteria RepID=A... 229 4e-58 UniRef50_A8U8N1 Exonuclease RexB n=1 Tax=Carnobacterium sp. AT7 ... 229 5e-58 UniRef50_B1C8W2 Putative uncharacterized protein n=1 Tax=Anaerof... 229 5e-58 UniRef50_A1AUN0 ATP-dependent DNA helicase PcrA n=10 Tax=Desulfu... 229 5e-58 UniRef50_C1A8M7 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas ... 229 5e-58 UniRef50_C0WAB3 ATP-dependent DNA helicase pcrA n=1 Tax=Acidamin... 229 7e-58 UniRef50_A4XKK0 ATP-dependent DNA helicase PcrA n=2 Tax=Clostrid... 228 1e-57 UniRef50_Q0AZZ6 ATP-dependent DNA helicase PcrA n=1 Tax=Syntroph... 228 1e-57 UniRef50_A7VTM6 Putative uncharacterized protein n=1 Tax=Clostri... 227 2e-57 UniRef50_C0VSX9 ATP-dependent DNA helicase n=2 Tax=Corynebacteri... 227 2e-57 UniRef50_Q9CD72 ATP-dependent DNA helicase pcrA n=26 Tax=Actinom... 226 3e-57 UniRef50_C8WP33 UvrD/REP helicase n=3 Tax=Coriobacteriaceae RepI... 226 3e-57 UniRef50_Q038V6 ATP-dependent helicase/deoxyribonuclease subunit... 226 4e-57 UniRef50_A5GQG6 UvrD/REP helicase n=18 Tax=Cyanobacteria RepID=A... 226 5e-57 UniRef50_A4XBE9 ATP-dependent DNA helicase PcrA n=18 Tax=Actinom... 225 6e-57 UniRef50_Q83GZ5 ATP-dependent DNA helicase n=2 Tax=Tropheryma wh... 225 1e-56 UniRef50_C4V2E0 ATP-dependent DNA helicase n=1 Tax=Selenomonas f... 225 1e-56 UniRef50_C5NYN7 ATP-dependent helicase PcrA n=1 Tax=Gemella haem... 225 1e-56 UniRef50_C3QGR5 ATP-dependent DNA helicase n=23 Tax=Bacteroidale... 224 2e-56 UniRef50_Q03D70 ATP-dependent helicase/deoxyribonuclease subunit... 224 2e-56 UniRef50_A9KP66 UvrD/REP helicase n=12 Tax=Bacteria RepID=A9KP66... 224 2e-56 UniRef50_C0EHH2 Putative uncharacterized protein n=1 Tax=Clostri... 224 2e-56 UniRef50_D2RIV6 ATP-dependent DNA helicase PcrA n=6 Tax=Veillone... 223 3e-56 UniRef50_B2GM51 ATP-dependent DNA helicase UvrD1 n=10 Tax=Actino... 223 3e-56 UniRef50_D0BN23 ATP-dependent DNA helicase PcrA n=5 Tax=Firmicut... 223 3e-56 UniRef50_A5TXQ2 Superfamily I ATP-dependent helicase n=15 Tax=Fu... 223 4e-56 UniRef50_C7QGW9 ATP-dependent DNA helicase PcrA n=8 Tax=Bacteria... 223 4e-56 UniRef50_D0LJZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum D... 223 5e-56 UniRef50_C7N6W8 DNA/RNA helicase, superfamily I n=1 Tax=Slackia ... 222 5e-56 UniRef50_Q1PY53 Strongly similar to ATP-dependent DNA helicase n... 222 5e-56 UniRef50_C2BHK2 Putative uncharacterized protein n=1 Tax=Anaeroc... 222 6e-56 UniRef50_C2CV85 Possible ATP-dependent DNA helicase n=2 Tax=Bifi... 222 7e-56 UniRef50_B2RKD8 ATP-dependent DNA helicase n=5 Tax=Bacteroidetes... 222 7e-56 UniRef50_C1A3F5 ATP-dependent DNA helicase UvrD1 n=31 Tax=Bacter... 221 8e-56 UniRef50_Q1Q1J4 Putative uncharacterized protein n=1 Tax=Candida... 221 8e-56 UniRef50_Q1WRR9 ATP-dependent helicase/deoxyribonuclease subunit... 221 9e-56 UniRef50_A0Q2Q4 ATP-dependent DNA helicase PcrA, putative n=23 T... 221 1e-55 UniRef50_D1BXF2 ATP-dependent DNA helicase PcrA n=5 Tax=Actinomy... 221 2e-55 UniRef50_D0JAI1 ATP-dependent DNA helicase n=2 Tax=Blattabacteri... 221 2e-55 UniRef50_A1TNG2 ATP-dependent DNA helicase UvrD n=11 Tax=cellula... 221 2e-55 UniRef50_C4G2S8 Putative uncharacterized protein n=1 Tax=Abiotro... 220 2e-55 UniRef50_D0BK92 Exonuclease RexB n=1 Tax=Granulicatella elegans ... 220 2e-55 UniRef50_B8FP41 ATP-dependent DNA helicase PcrA n=10 Tax=Firmicu... 220 2e-55 UniRef50_Q8EUN0 ATP-dependent DNA helicase n=1 Tax=Mycoplasma pe... 220 2e-55 UniRef50_A9F541 ATP-dependent DNA helicase n=1 Tax=Sorangium cel... 220 3e-55 UniRef50_Q38X70 ATP-dependent helicase/deoxyribonuclease subunit... 220 3e-55 UniRef50_Q2S550 ATP-dependent DNA helicase pcrA n=2 Tax=Rhodothe... 220 3e-55 UniRef50_P57654 ATP-dependent DNA helicase rep n=4 Tax=Buchnera ... 220 4e-55 UniRef50_B2KB12 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum... 220 4e-55 UniRef50_A7KV33 PcrA helicase n=1 Tax=Bacillus phage 0305phi8-36... 219 5e-55 UniRef50_Q018Z5 ATP-dependent DNA helicase (ISS) n=1 Tax=Ostreoc... 219 6e-55 UniRef50_B2V7G3 UvrD/REP helicase n=5 Tax=Aquificales RepID=B2V7... 219 7e-55 UniRef50_D1PL59 ATP-dependent DNA helicase n=4 Tax=Ruminococcace... 218 7e-55 UniRef50_A9WKU6 DNA helicase II n=2 Tax=Bacteria RepID=A9WKU6_RENSM 218 7e-55 UniRef50_UPI000051001F putative ATP-dependent DNA helicase II n=... 218 9e-55 UniRef50_C8NER5 Exonuclease RexB n=1 Tax=Granulicatella adiacens... 218 1e-54 UniRef50_C5VHV2 ATP-dependent DNA helicase PcrA n=20 Tax=Bactero... 218 1e-54 UniRef50_Q3AA34 ATP-dependent helicase/deoxyribonuclease subunit... 218 1e-54 UniRef50_B8GFE8 UvrD/REP helicase n=1 Tax=Methanosphaerula palus... 217 2e-54 UniRef50_P03018 DNA helicase II n=409 Tax=cellular organisms Rep... 217 2e-54 UniRef50_D2NR24 Superfamily I DNA and RNA helicase n=17 Tax=Bact... 217 2e-54 UniRef50_B1C9D7 Putative uncharacterized protein n=1 Tax=Anaerof... 217 2e-54 UniRef50_B5YF03 ATP-dependent DNA helicase PcrA n=2 Tax=Dictyogl... 217 2e-54 UniRef50_A9M0G6 ATP-dependent DNA helicase n=38 Tax=Betaproteoba... 217 3e-54 UniRef50_Q0AHY9 ATP-dependent DNA helicase UvrD n=16 Tax=Betapro... 216 4e-54 UniRef50_A5GA79 UvrD/REP helicase n=10 Tax=Desulfuromonadales Re... 216 4e-54 UniRef50_C1XMD9 ATP-dependent DNA helicase, Rep family n=1 Tax=M... 216 5e-54 UniRef50_A0RUT2 Superfamily I helicase n=1 Tax=Cenarchaeum symbi... 215 6e-54 UniRef50_C0R0K3 ATP-dependent DNA helicase n=2 Tax=Brachyspira R... 215 6e-54 UniRef50_A4RXK7 Predicted protein (Fragment) n=1 Tax=Ostreococcu... 215 7e-54 UniRef50_B3EU74 UvrD/REP helicase n=4 Tax=Bacteroidetes RepID=B3... 215 8e-54 UniRef50_C1RHS2 Exonuclease V gamma subunit n=1 Tax=Cellulomonas... 215 8e-54 UniRef50_C7M3I8 UvrD/REP helicase n=3 Tax=Bacteroidetes RepID=C7... 215 1e-53 UniRef50_Q68WT1 DNA helicase II n=17 Tax=Rickettsieae RepID=UVRD... 215 1e-53 UniRef50_B2A5W4 UvrD/REP helicase n=1 Tax=Natranaerobius thermop... 215 1e-53 UniRef50_C7RHP9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7R... 214 2e-53 UniRef50_Q67KI7 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 214 2e-53 UniRef50_B1I553 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria... 214 2e-53 UniRef50_C1ZAM6 DNA/RNA helicase, superfamily I n=1 Tax=Planctom... 213 2e-53 UniRef50_B1GYW6 ATP-dependent UvrD family DNA helicase PcrA n=1 ... 213 3e-53 UniRef50_A0M3U3 PcrA-like UvrD/Rep family ATP-dependent DNA heli... 213 3e-53 UniRef50_Q88U40 ATP-dependent helicase/deoxyribonuclease subunit... 213 4e-53 UniRef50_A9NHW3 DNA helicase II n=1 Tax=Acholeplasma laidlawii P... 212 5e-53 UniRef50_C7HU69 ATP-dependent DNA helicase PcrA n=2 Tax=Anaeroco... 212 6e-53 UniRef50_B5YHS6 ATP-dependent DNA helicase PcrA n=1 Tax=Thermode... 212 6e-53 UniRef50_B9EAN7 ATP-dependent nuclease subunit B n=1 Tax=Macroco... 212 7e-53 UniRef50_B4VQT2 UvrD/REP helicase subfamily n=6 Tax=Bacteria Rep... 211 8e-53 UniRef50_B7C8B0 Putative uncharacterized protein n=1 Tax=Eubacte... 211 9e-53 UniRef50_C5BBB0 ATP-dependent DNA helicase Rep, putative n=2 Tax... 211 1e-52 UniRef50_C1ZKV9 DNA/RNA helicase, superfamily I n=1 Tax=Planctom... 211 1e-52 UniRef50_Q28NL8 ATP-dependent DNA helicase, Rep family n=11 Tax=... 211 1e-52 UniRef50_C8PVF1 Putative exoribodeoxynuclease V, gamma subunit n... 211 1e-52 UniRef50_B2S250 Rep helicase, single-stranded DNA-dependent ATPa... 211 1e-52 UniRef50_C8WV10 UvrD/REP helicase n=2 Tax=Alicyclobacillus acido... 210 2e-52 UniRef50_B0MU18 Putative uncharacterized protein n=2 Tax=Bactero... 210 2e-52 UniRef50_UPI00016B20E8 ATP-dependent DNA helicase PcrA n=1 Tax=c... 210 2e-52 UniRef50_Q1IVP8 ATP-dependent DNA helicase, Rep family n=2 Tax=B... 210 3e-52 UniRef50_C6D4S8 ATP-dependent DNA helicase PcrA n=46 Tax=Firmicu... 210 3e-52 UniRef50_Q1DAU6 ATP-dependent DNA helicase, UvrD/REP family n=6 ... 210 4e-52 UniRef50_Q98PM4 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma p... 209 4e-52 UniRef50_D1A297 ATP-dependent DNA helicase PcrA n=3 Tax=Actinomy... 209 5e-52 UniRef50_C7NAU4 UvrD/REP helicase n=5 Tax=Fusobacteriaceae RepID... 209 5e-52 UniRef50_Q1J014 UvrD/REP helicase n=4 Tax=Deinococci RepID=Q1J01... 209 5e-52 UniRef50_UPI0001699EF8 Exodeoxyribonuclease V, RecC subunit n=1 ... 209 5e-52 UniRef50_C7RGF8 ATP-dependent nuclease subunit B-like protein n=... 209 5e-52 UniRef50_C9LR66 ATP-dependent DNA helicase PcrA n=1 Tax=Dialiste... 209 6e-52 UniRef50_C3RQ43 ATP-dependent DNA helicase n=4 Tax=Bacteria RepI... 208 8e-52 UniRef50_C8WTI7 ATP-dependent DNA helicase PcrA n=2 Tax=Alicyclo... 208 8e-52 UniRef50_A7NGD4 UvrD/REP helicase n=11 Tax=Chloroflexi RepID=A7N... 208 9e-52 UniRef50_A6CC22 ATP-dependent DNA helicase n=1 Tax=Planctomyces ... 208 1e-51 UniRef50_Q11GU4 ATP-dependent DNA helicase, Rep family n=53 Tax=... 208 1e-51 UniRef50_B0MNA1 Putative uncharacterized protein n=3 Tax=Clostri... 207 2e-51 UniRef50_B4CU41 UvrD/REP helicase n=1 Tax=Chthoniobacter flavus ... 207 2e-51 UniRef50_A6DKH4 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa ... 207 2e-51 UniRef50_Q7UIR9 ATP-dependent DNA helicase n=2 Tax=Planctomyceta... 207 2e-51 UniRef50_C5CHH9 ATP-dependent nuclease subunit B-like protein n=... 207 3e-51 UniRef50_A8SMG4 Putative uncharacterized protein n=1 Tax=Parvimo... 206 3e-51 UniRef50_C9RKG0 UvrD/REP helicase n=1 Tax=Fibrobacter succinogen... 206 3e-51 UniRef50_A4IYZ2 ATP-dependent DNA helicase/UvrD/REP helicase n=2... 206 3e-51 UniRef50_Q2J6E3 UvrD/REP helicase n=4 Tax=Actinomycetales RepID=... 206 3e-51 UniRef50_UPI0001C37CA1 ATP-dependent nuclease subunit B n=1 Tax=... 206 3e-51 UniRef50_C1TPS7 DNA/RNA helicase, superfamily I n=1 Tax=Dethiosu... 206 3e-51 UniRef50_B1XW04 UvrD/REP helicase n=41 Tax=Bacteria RepID=B1XW04... 206 3e-51 UniRef50_D1VUE5 ATP-dependent DNA helicase PcrA n=1 Tax=Peptonip... 206 4e-51 UniRef50_A5CU47 ATP-dependent DNA helicase n=4 Tax=Actinobacteri... 206 5e-51 UniRef50_Q5NVY5 ATP-dependent DNA helicase n=2 Tax=Archaea RepID... 205 9e-51 UniRef50_C2KR35 ATP-dependent DNA helicase n=3 Tax=Mobiluncus Re... 205 9e-51 UniRef50_C7MP63 DNA/RNA helicase, superfamily I n=6 Tax=Coriobac... 205 9e-51 UniRef50_UPI0001C37867 ATP-dependent DNA helicase PcrA n=1 Tax=R... 205 1e-50 UniRef50_Q5PB91 DNA helicase II n=20 Tax=Rickettsiales RepID=Q5P... 204 1e-50 UniRef50_C8WQE2 ATP-dependent nuclease subunit B-like protein n=... 204 1e-50 UniRef50_B2GEY3 ATP-dependent helicase/deoxyribonuclease subunit... 204 2e-50 UniRef50_Q31JE9 ATP-dependent DNA helicase UvrD n=3 Tax=Gammapro... 204 2e-50 UniRef50_Q6MAS4 Probable ATP-dependent DNA helicase, mutU n=1 Ta... 203 2e-50 UniRef50_Q21PD1 ATP-dependent DNA helicase Rep n=15 Tax=Gammapro... 203 3e-50 UniRef50_C9A8J1 Exonuclease RexB n=4 Tax=Enterococcus RepID=C9A8... 203 3e-50 UniRef50_A9ETX5 ATP-depentend DNA helicase n=1 Tax=Sorangium cel... 203 3e-50 UniRef50_B0P0N3 Putative uncharacterized protein n=2 Tax=Bacteri... 203 3e-50 UniRef50_UPI0000E87DAA UvrD/REP helicase n=1 Tax=Methylophilales... 203 4e-50 UniRef50_A5EWK9 DNA helicase II n=1 Tax=Dichelobacter nodosus VC... 203 5e-50 UniRef50_C5C915 ATP-dependent DNA helicase PcrA n=7 Tax=Actinomy... 202 5e-50 UniRef50_D2PLA7 UvrD/REP helicase n=1 Tax=Kribbella flavida DSM ... 202 6e-50 UniRef50_C1YL28 DNA/RNA helicase, superfamily I n=2 Tax=Nocardio... 202 6e-50 UniRef50_A8R903 Putative uncharacterized protein n=2 Tax=Erysipe... 202 7e-50 UniRef50_B9KCT9 ATP-dependent DNA helicase n=1 Tax=Campylobacter... 202 8e-50 UniRef50_D0LIZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum D... 202 8e-50 UniRef50_D1NAY9 UvrD/REP helicase n=1 Tax=Victivallis vadensis A... 202 9e-50 UniRef50_B2UQR8 UvrD/REP helicase n=2 Tax=Verrucomicrobiaceae Re... 201 1e-49 UniRef50_B5K795 UvrD/REP helicase n=5 Tax=Rhodobacterales RepID=... 201 1e-49 UniRef50_Q3F0Y3 ATP-dependent DNA helicase pcrA n=2 Tax=Bacillus... 201 1e-49 UniRef50_C6NTI8 ATP-dependent DNA helicase UvrD/PcrA n=2 Tax=Gam... 201 2e-49 UniRef50_Q5M2T6 ATP-dependent helicase/deoxyribonuclease subunit... 200 2e-49 UniRef50_A5FDD0 ATP-dependent DNA helicase, Rep family n=2 Tax=F... 200 2e-49 UniRef50_C0R2D4 ATP-dependent DNA helicase n=4 Tax=Brachyspira R... 200 3e-49 UniRef50_B1MZM3 ATP-dependent helicase/deoxyribonuclease subunit... 200 3e-49 UniRef50_P44804 ATP-dependent DNA helicase rep n=275 Tax=Proteob... 200 3e-49 UniRef50_C5RAZ7 ATP-dependent deoxyribonuclease, subunit B n=1 T... 200 3e-49 UniRef50_D1ACX8 UvrD/REP helicase n=2 Tax=Streptosporangineae Re... 199 4e-49 UniRef50_Q6MND7 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio ... 199 4e-49 UniRef50_Q2GE51 Helicase, UvrD/Rep family n=2 Tax=Neorickettsia ... 199 4e-49 UniRef50_B6QHN1 ATP-depentend DNA helicase, putative n=1 Tax=Pen... 199 4e-49 UniRef50_Q04GY8 ATP-dependent helicase/deoxyribonuclease subunit... 199 5e-49 UniRef50_A6GG96 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica ... 199 5e-49 UniRef50_B9KXW3 ATP-dependent DNA helicase pcrA n=2 Tax=Thermomi... 199 6e-49 UniRef50_B0VGK7 Superfamily I DNA and RNA helicases n=1 Tax=Cand... 199 6e-49 UniRef50_B3QYS3 UvrD/REP helicase n=9 Tax=Chlorobiaceae RepID=B3... 199 7e-49 UniRef50_A1WZS5 ATP-dependent DNA helicase UvrD n=3 Tax=Gammapro... 199 7e-49 UniRef50_C8WBZ1 UvrD/REP helicase n=7 Tax=Alphaproteobacteria Re... 198 8e-49 UniRef50_A1AVZ1 UvrD/REP helicase n=3 Tax=Gammaproteobacteria Re... 198 9e-49 UniRef50_C9LD15 ATP-dependent DNA helicase PcrA n=1 Tax=Prevotel... 198 9e-49 UniRef50_A4F8N5 Probable ATP-dependent DNA helicase n=1 Tax=Sacc... 198 1e-48 UniRef50_D1B9M8 UvrD/REP helicase n=1 Tax=Thermanaerovibrio acid... 198 1e-48 UniRef50_C8XDJ8 ATP-dependent DNA helicase PcrA n=2 Tax=Actinomy... 197 2e-48 UniRef50_C2KVH9 ATP-dependent deoxyribonuclease subunit B n=1 Ta... 197 2e-48 UniRef50_A8YVK1 ATP-dependent helicase/deoxyribonuclease subunit... 197 2e-48 UniRef50_Q256I8 DNA/RNA helicase n=17 Tax=Chlamydiales RepID=Q25... 197 2e-48 UniRef50_A3CVM8 ATP-dependent nuclease subunit B-like protein n=... 197 2e-48 UniRef50_A6GB18 ATP-dependent DNA helicase PcrA n=1 Tax=Plesiocy... 196 3e-48 UniRef50_Q4A5L9 Atp-dependent helicase n=2 Tax=Mycoplasma synovi... 196 3e-48 UniRef50_C0QC97 PcrA1 n=1 Tax=Desulfobacterium autotrophicum HRM... 196 4e-48 UniRef50_C6V4L3 DNA helicase II, UvrD/Rep family, N-terminal n=4... 196 4e-48 UniRef50_B0RZV9 ATP-dependent DNA helicase n=2 Tax=Finegoldia ma... 196 5e-48 UniRef50_C6NVE2 ATP-dependent DNA helicase Rep n=1 Tax=Acidithio... 196 5e-48 UniRef50_C3XD55 ATP-dependent DNA helicase n=1 Tax=Helicobacter ... 196 5e-48 UniRef50_Q89A21 ATP-dependent DNA helicase rep n=2 Tax=Buchnera ... 195 9e-48 UniRef50_A6VEA1 ATP-dependent DNA helicase Rep n=102 Tax=Proteob... 195 1e-47 UniRef50_Q4FPM1 DNA helicase II n=5 Tax=Bacteria RepID=Q4FPM1_PELUB 195 1e-47 UniRef50_D2PY24 ATP-dependent nuclease subunit B-like protein n=... 194 1e-47 UniRef50_Q0SMP9 Rep helicase, single-stranded DNA-dependent ATPa... 194 1e-47 UniRef50_B2KE91 ATP-dependent nuclease subunit B-like protein n=... 194 2e-47 UniRef50_UPI0001C3187F UvrD/REP helicase n=1 Tax=Conexibacter wo... 194 2e-47 UniRef50_C3JBX6 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 194 2e-47 UniRef50_B7AA42 UvrD/REP helicase n=1 Tax=Thermus aquaticus Y51M... 194 2e-47 UniRef50_A6UNC7 UvrD/REP helicase n=1 Tax=Methanococcus vannieli... 193 3e-47 UniRef50_A8HYL6 DNA helicase II n=8 Tax=Rhizobiales RepID=A8HYL6... 193 3e-47 UniRef50_Q30TG3 UvrD/REP helicase n=8 Tax=Epsilonproteobacteria ... 193 4e-47 UniRef50_D2PLA6 UvrD/REP helicase n=2 Tax=Nocardioidaceae RepID=... 193 4e-47 UniRef50_Q6MFN4 Related to ATP-dependent DNA helicase n=7 Tax=So... 193 5e-47 UniRef50_D1R4U3 Putative uncharacterized protein n=1 Tax=Parachl... 193 5e-47 UniRef50_A1BEA2 ATP-dependent DNA helicase PcrA n=2 Tax=Chlorobi... 192 5e-47 UniRef50_B4U5U9 UvrD/REP helicase n=1 Tax=Hydrogenobaculum sp. Y... 192 5e-47 UniRef50_B6IP09 UvrD n=8 Tax=cellular organisms RepID=B6IP09_RHOCS 192 6e-47 UniRef50_Q7NB99 UvrD n=1 Tax=Mycoplasma gallisepticum RepID=Q7NB... 192 6e-47 UniRef50_C9M511 ATP-dependent DNA helicase PcrA n=2 Tax=Synergis... 192 7e-47 UniRef50_Q3A0S9 ATP-dependent DNA helicase PcrA n=1 Tax=Pelobact... 191 9e-47 UniRef50_C8V6U5 DNA helicase and DNA-dependent ATPase (Eurofung)... 191 1e-46 UniRef50_C6HUX3 Putative ATP-dependent DNA helicase, UvrD/REP fa... 191 1e-46 UniRef50_D0RN21 ATP-dependent DNA helicase PcrA n=1 Tax=alpha pr... 191 1e-46 UniRef50_D0L0Z4 UvrD/REP helicase n=1 Tax=Halothiobacillus neapo... 191 1e-46 UniRef50_A0LDC5 ATP-dependent DNA helicase, Rep family n=1 Tax=M... 191 1e-46 UniRef50_A5HZM6 ATP-dependent DNA helicase n=4 Tax=Clostridiales... 191 2e-46 UniRef50_A5VHK1 ATP-dependent helicase/deoxyribonuclease subunit... 191 2e-46 UniRef50_A0LFK0 ATP-dependent DNA helicase, Rep family n=1 Tax=S... 190 2e-46 UniRef50_A2QP78 Contig An07c0280, complete genome n=8 Tax=Tricho... 190 2e-46 UniRef50_B1AJE0 ATP-dependent DNA helicase PcrA n=15 Tax=Ureapla... 190 2e-46 UniRef50_C1SJ11 DNA/RNA helicase, superfamily I n=1 Tax=Denitrov... 190 3e-46 UniRef50_C7XXL1 ATP-dependent nuclease subunit B n=1 Tax=Lactoba... 190 3e-46 UniRef50_D1YBS2 UvrD/REP helicase n=2 Tax=Propionibacterium acne... 189 4e-46 UniRef50_B3QF13 UvrD/REP helicase n=9 Tax=Rhizobiales RepID=B3QF... 189 4e-46 UniRef50_A0PR94 ATP-dependent DNA helicase n=12 Tax=Mycobacteriu... 189 4e-46 UniRef50_B2GL30 UvrD/Rep helicase family protein n=1 Tax=Kocuria... 189 5e-46 UniRef50_A6CDV2 ATP-dependent deoxyribonuclease subunit B n=1 Ta... 189 6e-46 UniRef50_A0QK57 Superfamily protein I DNA and RNA helicases n=3 ... 189 7e-46 UniRef50_Q027B8 ATP-dependent nuclease subunit B-like protein n=... 189 7e-46 UniRef50_D2R6Z4 UvrD/REP helicase n=4 Tax=Planctomycetaceae RepI... 188 8e-46 UniRef50_C2ME74 ATP-dependent DNA helicase PcrA n=1 Tax=Porphyro... 188 9e-46 UniRef50_A6NZ65 Putative uncharacterized protein n=1 Tax=Bactero... 188 1e-45 UniRef50_B6V2U6 Gp34.33 n=3 Tax=Bacillus phage SPO1 RepID=B6V2U6... 188 1e-45 UniRef50_Q2STJ5 ATP-dependent DNA helicase Rep n=90 Tax=Bacteria... 188 2e-45 UniRef50_D1PLS4 Putative ATP-dependent nuclease subunit B n=1 Ta... 187 2e-45 UniRef50_B0MQS6 Putative uncharacterized protein n=1 Tax=Eubacte... 187 2e-45 UniRef50_C7MAK0 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 187 2e-45 UniRef50_B9X9R1 UvrD/REP helicase n=1 Tax=bacterium Ellin514 Rep... 187 2e-45 UniRef50_D1YX62 Putative ATP-dependent DNA helicase n=1 Tax=Meth... 187 2e-45 UniRef50_Q1DC55 ATP-dependent DNA helicase PcrA n=2 Tax=Cystobac... 187 3e-45 UniRef50_Q6XYV7 ATP-dependent DNA helicase n=2 Tax=Spiroplasma R... 187 3e-45 UniRef50_B0RZ36 ATP-dependent DNA helicase n=21 Tax=Bacteria Rep... 187 3e-45 UniRef50_B5E4P4 ATP-dependent helicase/deoxyribonuclease subunit... 187 3e-45 UniRef50_C8PAK3 ATP-dependent exonuclease subunit B n=1 Tax=Lact... 186 4e-45 UniRef50_B0SSS8 ATP-dependent DNA helicase PcrA n=6 Tax=Leptospi... 186 4e-45 UniRef50_D2R5I6 UvrD/REP helicase n=1 Tax=Pirellula staleyi DSM ... 186 5e-45 UniRef50_UPI00016C5306 ATP-dependent DNA helicase n=2 Tax=Gemmat... 186 6e-45 UniRef50_D1J8P0 ATP-dependent helicase n=1 Tax=Mycoplasma homini... 185 9e-45 UniRef50_A5IY88 ATP dependent helicase n=2 Tax=Mycoplasma RepID=... 184 1e-44 UniRef50_D1ACM7 UvrD/REP helicase n=1 Tax=Thermomonospora curvat... 184 1e-44 UniRef50_C9RM93 UvrD/REP helicase n=1 Tax=Fibrobacter succinogen... 184 1e-44 UniRef50_C6P8R1 UvrD/REP helicase n=1 Tax=Thermoanaerobacterium ... 184 1e-44 UniRef50_C2L0R7 ATP-dependent DNA helicase PcrA n=1 Tax=Oribacte... 184 2e-44 UniRef50_Q0F272 ATP-dependent DNA helicase Rep n=1 Tax=Mariprofu... 184 2e-44 UniRef50_UPI000050F875 UvrD/REP helicase n=1 Tax=Brevibacterium ... 184 2e-44 UniRef50_A5EW07 DNA helicase UvrD n=2 Tax=Dichelobacter nodosus ... 184 2e-44 UniRef50_A4REL5 Putative uncharacterized protein n=1 Tax=Magnapo... 183 3e-44 UniRef50_B3PNG5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma ar... 183 3e-44 UniRef50_Q72IS0 DNA helicase uvrD n=3 Tax=Thermus thermophilus R... 183 4e-44 UniRef50_A5UVF1 ATP-dependent DNA helicase, Rep family n=6 Tax=C... 182 7e-44 UniRef50_C7MVN2 DNA/RNA helicase, superfamily I n=5 Tax=Actinomy... 182 7e-44 UniRef50_A1W088 ATP-dependent DNA helicase, UvrD/REP family n=30... 182 8e-44 UniRef50_P45612 Probable DNA helicase II homolog n=4 Tax=Mollicu... 182 8e-44 UniRef50_B0KVA6 Putative UvrD/REP helicase n=1 Tax=uncultured ca... 182 8e-44 UniRef50_Q8D2T2 UvrD protein n=1 Tax=Wigglesworthia glossinidia ... 181 1e-43 UniRef50_B4UKQ6 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID... 181 1e-43 UniRef50_C8S459 UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 Re... 181 1e-43 UniRef50_D0LEA1 UvrD/REP helicase n=1 Tax=Gordonia bronchialis D... 181 1e-43 UniRef50_B0DAK6 Predicted protein n=1 Tax=Laccaria bicolor S238N... 181 1e-43 UniRef50_B2A098 UvrD/REP helicase n=3 Tax=Verrucomicrobia RepID=... 181 1e-43 UniRef50_B2S4R5 DNA helicase II n=3 Tax=Treponema RepID=B2S4R5_T... 181 1e-43 UniRef50_C4R3W4 DNA helicase and DNA-dependent ATPase n=1 Tax=Pi... 181 2e-43 UniRef50_UPI0001B56A46 ATP-dependent DNA helicase n=1 Tax=Strept... 180 2e-43 UniRef50_C8WI10 UvrD/REP helicase n=3 Tax=Bacteria RepID=C8WI10_... 180 3e-43 UniRef50_Q67LG5 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 180 3e-43 UniRef50_UPI000023F08A hypothetical protein FG08405.1 n=1 Tax=Gi... 180 3e-43 UniRef50_B6WA23 Putative uncharacterized protein n=1 Tax=Anaeroc... 180 3e-43 UniRef50_D0LEA2 UvrD/REP helicase n=3 Tax=Corynebacterineae RepI... 179 5e-43 UniRef50_B2UPY5 UvrD/REP helicase n=2 Tax=Verrucomicrobia RepID=... 179 5e-43 UniRef50_A8TD22 UvrD/REP helicase n=2 Tax=cellular organisms Rep... 179 5e-43 UniRef50_Q1CRC0 DNA helicase II n=13 Tax=Helicobacter RepID=Q1CR... 179 6e-43 UniRef50_A1SGT7 UvrD/REP helicase n=1 Tax=Nocardioides sp. JS614... 179 6e-43 UniRef50_D2MPE9 Putative ATP-dependent helicase PcrA n=1 Tax=Bul... 178 9e-43 UniRef50_C4DDU0 DNA/RNA helicase, superfamily I n=1 Tax=Stackebr... 178 1e-42 UniRef50_A9WPI8 ATP-dependent DNA helicase n=1 Tax=Renibacterium... 178 1e-42 UniRef50_C7QE44 UvrD/REP helicase n=1 Tax=Catenulispora acidiphi... 178 1e-42 UniRef50_C4XGR7 ATP-dependent DNA helicase n=4 Tax=Desulfovibrio... 178 1e-42 UniRef50_B7J2J0 Exodeoxyribonuclease V, gamma chain n=26 Tax=Bor... 177 2e-42 UniRef50_Q2NK11 UvrD helicase n=2 Tax=Candidatus Phytoplasma ast... 177 2e-42 UniRef50_C1E652 ATP-dependent DNA helicase n=2 Tax=Micromonas Re... 177 2e-42 UniRef50_UPI0001C314BB UvrD/REP helicase n=1 Tax=Conexibacter wo... 177 2e-42 UniRef50_C5C3C7 ATP-dependent nuclease subunit B-like protein n=... 177 2e-42 UniRef50_B9R0C3 Putative uncharacterized protein n=1 Tax=Labrenz... 177 3e-42 UniRef50_Q9S3U7 Rep helicase n=2 Tax=Gammaproteobacteria RepID=Q... 176 4e-42 UniRef50_C7PL50 UvrD/REP helicase n=1 Tax=Chitinophaga pinensis ... 176 5e-42 UniRef50_C2BJF9 Superfamily I DNA and RNA helicase n=4 Tax=Coryn... 176 6e-42 UniRef50_C5VEC6 ATP-dependent DNA helicase n=2 Tax=Corynebacteri... 176 6e-42 UniRef50_Q98PF5 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma p... 175 8e-42 UniRef50_C8P127 ATP-dependent DNA helicase PcrA n=1 Tax=Erysipel... 175 9e-42 UniRef50_A0JYL5 UvrD/REP helicase n=4 Tax=Actinomycetales RepID=... 174 1e-41 UniRef50_C7M335 UvrD/REP helicase n=1 Tax=Acidimicrobium ferroox... 174 1e-41 UniRef50_B2A3D2 UvrD/REP helicase n=1 Tax=Natranaerobius thermop... 174 1e-41 UniRef50_C3JKU1 UvrD/REP helicase domain protein n=6 Tax=Coryneb... 174 2e-41 UniRef50_B2WB64 ATP-dependent DNA helicase pcrA n=2 Tax=Pleospor... 174 2e-41 UniRef50_A6TQ92 UvrD/REP helicase n=2 Tax=Alkaliphilus RepID=A6T... 174 2e-41 UniRef50_D1X726 UvrD/REP helicase n=22 Tax=Streptomyces RepID=D1... 174 2e-41 UniRef50_Q6BW47 DEHA2B14410p n=3 Tax=Saccharomycetaceae RepID=Q6... 173 3e-41 UniRef50_A4W0M6 ATP-dependent helicase/deoxyribonuclease subunit... 173 3e-41 UniRef50_D1KF50 SRS2 n=6 Tax=rosids RepID=D1KF50_ARATH 173 3e-41 UniRef50_A1SGT8 UvrD/REP helicase n=1 Tax=Nocardioides sp. JS614... 173 4e-41 UniRef50_A8ZTY6 UvrD/REP helicase n=1 Tax=Desulfococcus oleovora... 173 5e-41 UniRef50_Q9K8M6 ATP-dependent nuclease subunit A n=1 Tax=Bacillu... 173 5e-41 UniRef50_A5U7M1 UvrD/Rep family helicase n=13 Tax=Corynebacterin... 173 5e-41 UniRef50_B8FBU8 UvrD/REP helicase n=2 Tax=Bacteria RepID=B8FBU8_... 172 7e-41 UniRef50_Q1GAB0 ATP-dependent helicase/deoxyribonuclease subunit... 172 8e-41 UniRef50_C5CB78 DNA/RNA helicase, superfamily I n=1 Tax=Micrococ... 172 9e-41 UniRef50_UPI0001BC375D ATP-dependent DNA helicase n=1 Tax=Butyri... 171 1e-40 UniRef50_C4Z7Y1 DNA helicase II / ATP-dependent DNA helicase Pcr... 171 1e-40 UniRef50_D2SFF1 UvrD/REP helicase n=1 Tax=Geodermatophilus obscu... 171 1e-40 UniRef50_B3QYG2 UvrD/REP helicase n=1 Tax=Chloroherpeton thalass... 171 1e-40 UniRef50_Q11Q08 DNA-dependent ATPase I and helicase II n=1 Tax=C... 171 2e-40 UniRef50_A3TGM1 Putative DNA helicase n=1 Tax=Janibacter sp. HTC... 171 2e-40 UniRef50_D1V906 UvrD/REP helicase n=1 Tax=Frankia sp. EuI1c RepI... 171 2e-40 UniRef50_Q6ZHK2 Os07g0492100 protein n=4 Tax=Poaceae RepID=Q6ZHK... 171 2e-40 UniRef50_O66983 ATP-dependent DNA helicase REP n=3 Tax=Aquificac... 171 2e-40 UniRef50_C4DDU1 DNA/RNA helicase, superfamily I n=1 Tax=Stackebr... 171 2e-40 UniRef50_B6K032 ATP-dependent DNA helicase srs2 n=1 Tax=Schizosa... 171 2e-40 UniRef50_B9XNK2 UvrD/REP helicase n=2 Tax=Verrucomicrobiales Rep... 170 2e-40 UniRef50_Q029V8 ATP-dependent DNA helicase, Rep family n=1 Tax=C... 170 2e-40 UniRef50_C5TB61 UvrD/REP helicase n=3 Tax=cellular organisms Rep... 170 3e-40 UniRef50_C7R1Q8 UvrD/REP helicase n=1 Tax=Jonesia denitrificans ... 170 4e-40 UniRef50_D2MLK1 DNA helicase, UvrD/REP type n=1 Tax=Candidatus P... 169 4e-40 UniRef50_A4F8N4 Possible ATP-dependent DNA helicase n=2 Tax=Pseu... 169 4e-40 UniRef50_A9H0P3 UvrD/REP helicase n=3 Tax=Alphaproteobacteria Re... 169 5e-40 UniRef50_Q2IGD2 Putative uncharacterized protein n=3 Tax=Anaerom... 169 5e-40 UniRef50_Q123W9 UvrD/REP helicase n=16 Tax=cellular organisms Re... 168 1e-39 UniRef50_A6W771 UvrD/REP helicase n=1 Tax=Kineococcus radiotoler... 168 1e-39 UniRef50_A8ZYJ7 UvrD/REP helicase n=1 Tax=Desulfococcus oleovora... 168 1e-39 UniRef50_C1V6P7 ATP-dependent exonuclease V beta subunit, helica... 167 2e-39 UniRef50_A0LVT8 UvrD/REP helicase n=1 Tax=Acidothermus celluloly... 167 3e-39 UniRef50_C6XGC2 DNA helicase II n=1 Tax=Candidatus Liberibacter ... 167 3e-39 UniRef50_UPI0001AEED98 ATP-dependent DNA helicase n=3 Tax=Strept... 166 3e-39 UniRef50_Q02D21 ATP-dependent nuclease subunit B-like protein n=... 166 3e-39 UniRef50_Q10213 ATP-dependent DNA helicase srs2 n=1 Tax=Schizosa... 166 4e-39 UniRef50_O26572 DNA helicase II n=1 Tax=Methanothermobacter ther... 166 5e-39 UniRef50_C0W6Z4 Possible UvrD/REP helicase n=1 Tax=Actinomyces u... 166 5e-39 UniRef50_A8Q3F1 Putative uncharacterized protein n=1 Tax=Malasse... 165 7e-39 UniRef50_B2A859 ATP-dependent nuclease subunit B-like protein n=... 165 8e-39 UniRef50_B3E665 UvrD/REP helicase n=1 Tax=Geobacter lovleyi SZ R... 165 9e-39 UniRef50_O31626 Putative ATP-dependent DNA helicase yjcD n=3 Tax... 165 1e-38 UniRef50_C5MA33 Predicted protein n=3 Tax=Candida RepID=C5MA33_C... 164 1e-38 UniRef50_A5I1P6 ATP-dependent DNA helicase n=14 Tax=Clostridium ... 163 3e-38 UniRef50_C6P8R0 ATP-dependent nuclease subunit B-like protein n=... 163 3e-38 UniRef50_Q0EW02 DNA helicase II n=1 Tax=Mariprofundus ferrooxyda... 163 3e-38 UniRef50_Q6KHF5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mo... 163 4e-38 UniRef50_A8M3F7 UvrD/REP helicase n=5 Tax=Actinomycetales RepID=... 163 4e-38 UniRef50_A3EU22 Putative ATP-dependent DNA helicase, UvrD/REP fa... 163 5e-38 UniRef50_D2SFF2 UvrD/REP helicase n=1 Tax=Geodermatophilus obscu... 163 5e-38 UniRef50_C4Y181 Putative uncharacterized protein n=1 Tax=Clavisp... 163 5e-38 UniRef50_A2RH76 ATP-dependent helicase/deoxyribonuclease subunit... 163 6e-38 UniRef50_A6RX56 Putative uncharacterized protein n=2 Tax=Sclerot... 162 9e-38 UniRef50_C7MBM6 DNA/RNA helicase, superfamily I n=1 Tax=Brachyba... 162 1e-37 UniRef50_B7GLR0 Putative uncharacterized protein n=1 Tax=Anoxyba... 161 1e-37 UniRef50_Q600N7 ATP-dependent DNA helicase n=6 Tax=Mycoplasma Re... 161 1e-37 UniRef50_A7HBX8 UvrD/REP helicase n=7 Tax=Cystobacterineae RepID... 161 1e-37 UniRef50_Q2FUG2 ATP-dependent nuclease subunit B-like n=1 Tax=Me... 161 1e-37 UniRef50_C5VUD6 UvrD/REP helicase n=1 Tax=Clostridium phage D-18... 161 1e-37 UniRef50_D1YBS1 UvrD/REP helicase n=3 Tax=Propionibacterium acne... 161 1e-37 UniRef50_A2F783 UvrD/REP helicase family protein n=1 Tax=Trichom... 161 1e-37 UniRef50_A7IDD4 UvrD/REP helicase n=3 Tax=Proteobacteria RepID=A... 161 2e-37 UniRef50_B3DUG1 ATP-dependent DNA helicase UvrD/PcrA n=1 Tax=Met... 161 2e-37 UniRef50_C1XZD7 DNA/RNA helicase, superfamily I n=1 Tax=Meiother... 161 2e-37 UniRef50_B9WE90 ATP-dependent DNA helicase, putative n=1 Tax=Can... 161 2e-37 UniRef50_B1VAQ4 ATP-dependent DNA helicase n=1 Tax=Candidatus Ph... 161 2e-37 UniRef50_A9BJS5 Putative uncharacterized protein n=1 Tax=Petroto... 160 2e-37 UniRef50_C0QS88 Putative uncharacterized protein n=1 Tax=Perseph... 160 2e-37 UniRef50_Q6C4F2 YALI0E27269p n=1 Tax=Yarrowia lipolytica RepID=Q... 160 2e-37 UniRef50_Q2RL77 ATP-dependent helicase/nuclease subunit A n=2 Ta... 160 2e-37 UniRef50_C7RA34 Putative uncharacterized protein n=1 Tax=Kangiel... 160 2e-37 UniRef50_A7AXS4 Putative uncharacterized protein n=1 Tax=Ruminoc... 160 3e-37 UniRef50_A5DZQ5 Putative uncharacterized protein n=1 Tax=Loddero... 160 4e-37 UniRef50_B7GQ32 ATP-dependent nuclease subunit B-like protein n=... 159 4e-37 UniRef50_A5WC18 UvrD/REP helicase n=2 Tax=Psychrobacter RepID=A5... 159 4e-37 UniRef50_C0QD81 PcrA2 n=2 Tax=Bacteria RepID=C0QD81_DESAH 159 4e-37 UniRef50_UPI000169433B UvrD/REP helicase n=1 Tax=Paenibacillus l... 159 5e-37 UniRef50_C2BJG0 Helicase n=5 Tax=Corynebacterium RepID=C2BJG0_9CORY 159 6e-37 UniRef50_B3E1Z6 UvrD/REP helicase n=3 Tax=Geobacter RepID=B3E1Z6... 159 7e-37 UniRef50_C1ZK16 ATP-dependent exonuclease V beta subunit, helica... 159 7e-37 UniRef50_A7HA18 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID... 159 8e-37 UniRef50_A3DH19 ATP-dependent helicase/nuclease subunit A n=7 Ta... 159 8e-37 UniRef50_A6W770 UvrD/REP helicase n=1 Tax=Kineococcus radiotoler... 159 8e-37 UniRef50_Q6AFN3 ATP-dependent DNA helicase n=4 Tax=Actinobacteri... 159 8e-37 UniRef50_B3R0N7 ATP-dependent DNA helicase n=1 Tax=Candidatus Ph... 158 9e-37 UniRef50_C5NXT8 Putative uncharacterized protein n=1 Tax=Gemella... 158 2e-36 UniRef50_A7VJ43 Putative uncharacterized protein n=1 Tax=Clostri... 158 2e-36 UniRef50_B0S8V9 ATP-dependent DNA helicase n=2 Tax=Leptospira bi... 158 2e-36 UniRef50_B8FXD7 ATP-dependent helicase/nuclease subunit A n=2 Ta... 158 2e-36 UniRef50_Q5HY14 DNA helicase II UvrD n=2 Tax=Gluconobacter oxyda... 157 2e-36 UniRef50_C3LBP3 ATP-dependent DNA helicase, UvrD/REP family n=82... 157 3e-36 UniRef50_Q6KHF3 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mo... 157 3e-36 UniRef50_UPI000185BEF4 helicase, uvrd/rep family n=1 Tax=Coryneb... 156 3e-36 UniRef50_C7HSP4 Putative uncharacterized protein n=1 Tax=Anaeroc... 156 4e-36 UniRef50_Q9RNX7 RecC1001 (Fragment) n=71 Tax=Bacteria RepID=Q9RN... 156 4e-36 UniRef50_Q2S575 ATP-dependent DNA helicase n=2 Tax=Rhodothermace... 156 5e-36 UniRef50_C6WM78 UvrD/REP helicase n=4 Tax=Actinomycetales RepID=... 156 6e-36 UniRef50_D1XU37 UvrD/REP helicase n=3 Tax=Actinomycetales RepID=... 156 6e-36 UniRef50_C6HZQ0 UvrD/REP helicase n=3 Tax=Leptospirillum RepID=C... 155 7e-36 UniRef50_C0WBY1 Predicted protein n=1 Tax=Acidaminococcus sp. D2... 155 7e-36 UniRef50_A7HKZ3 UvrD/REP helicase n=4 Tax=Thermotogaceae RepID=A... 155 8e-36 UniRef50_A5HYY0 ATP-dependent helicase/nuclease subunit A n=11 T... 155 1e-35 UniRef50_B2IL96 UvrD/REP helicase n=1 Tax=Beijerinckia indica su... 155 1e-35 UniRef50_Q18AN9 ATP-dependent helicase/nuclease subunit A n=7 Ta... 154 1e-35 UniRef50_Q04T32 ATP-dependent DNA helicase n=4 Tax=Leptospira Re... 154 2e-35 UniRef50_C2M7M3 Putative uncharacterized protein n=1 Tax=Capnocy... 154 2e-35 UniRef50_C8RQU9 ATP-dependent DNA helicase II n=2 Tax=Corynebact... 154 2e-35 UniRef50_C1RP66 DNA/RNA helicase, superfamily I n=1 Tax=Cellulom... 154 3e-35 UniRef50_A8SI09 Putative uncharacterized protein n=2 Tax=Faecali... 153 3e-35 UniRef50_Q2LTE2 UvrD/rep helicase n=1 Tax=Syntrophus aciditrophi... 153 3e-35 UniRef50_C8XJ56 UvrD/REP helicase n=1 Tax=Nakamurella multiparti... 153 3e-35 UniRef50_UPI0001C31915 UvrD/REP helicase n=1 Tax=Conexibacter wo... 153 4e-35 UniRef50_C6CW81 UvrD/REP helicase n=2 Tax=Bacillales RepID=C6CW8... 153 4e-35 UniRef50_B5CQ86 Putative uncharacterized protein n=1 Tax=Ruminoc... 153 4e-35 UniRef50_B1VFC4 Putative ATP-dependent DNA helicase II n=1 Tax=C... 153 5e-35 UniRef50_A9BHB1 UvrD/REP helicase n=8 Tax=Thermotogaceae RepID=A... 153 6e-35 UniRef50_Q331U3 Putative ATP-dependent DNA helicase n=1 Tax=Clos... 152 6e-35 UniRef50_C5VEC7 Helicase, uvrd/rep family n=2 Tax=Corynebacteriu... 152 6e-35 UniRef50_UPI0001C314BA ATP-dependent nuclease subunit B-like pro... 152 7e-35 UniRef50_B7GM51 ATP-dependent helicase/nuclease subunit A n=1 Ta... 152 8e-35 UniRef50_C4LK54 Putative ATP-dependent DNA helicase II n=1 Tax=C... 152 8e-35 UniRef50_D2RKU2 ATP-dependent nuclease subunit B-like protein n=... 152 8e-35 UniRef50_C7HSP5 Putative uncharacterized protein n=1 Tax=Anaeroc... 152 1e-34 UniRef50_A0AL18 ATP-dependent helicase/nuclease subunit A n=3 Ta... 151 1e-34 UniRef50_Q2RLV0 UvrD/REP helicase n=2 Tax=cellular organisms Rep... 151 1e-34 UniRef50_A6CDV1 UvrD/REP helicase n=1 Tax=Planctomyces maris DSM... 151 1e-34 UniRef50_A7Z3H2 YjcD n=3 Tax=Bacillus RepID=A7Z3H2_BACA2 151 1e-34 UniRef50_Q189U3 Putative ATP-dependent DNA helicase n=8 Tax=Clos... 151 1e-34 UniRef50_A5DGH7 Putative uncharacterized protein n=2 Tax=Pichia ... 151 1e-34 UniRef50_A8STY9 Putative uncharacterized protein n=1 Tax=Coproco... 151 2e-34 UniRef50_Q8RCZ0 ATP-dependent helicase/nuclease subunit A n=3 Ta... 151 2e-34 UniRef50_C0QTS0 Putative UvrD/REP helicase n=1 Tax=Persephonella... 151 2e-34 UniRef50_C8NWA9 ATP-dependent DNA helicase n=1 Tax=Corynebacteri... 151 2e-34 UniRef50_A7VD84 Putative uncharacterized protein n=2 Tax=Clostri... 150 2e-34 UniRef50_C4Z0W6 Putative uncharacterized protein n=1 Tax=Eubacte... 150 3e-34 UniRef50_B1HN90 ATP-dependent helicase/nuclease subunit A n=2 Ta... 150 3e-34 UniRef50_C0XV87 ATP-dependent DNA helicase n=10 Tax=cellular org... 150 3e-34 UniRef50_A6GBC2 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica ... 150 3e-34 UniRef50_A6VFA5 UvrD/REP helicase n=2 Tax=Methanococcus maripalu... 150 4e-34 UniRef50_C1ZCN1 ATP-dependent nuclease, subunit B n=1 Tax=Planct... 150 4e-34 UniRef50_A9KTE6 ATP-dependent helicase/nuclease subunit A n=1 Ta... 150 4e-34 UniRef50_C6P6S9 Putative uncharacterized protein n=1 Tax=Siderox... 150 4e-34 UniRef50_D1BAW5 DNA/RNA helicase, superfamily I n=1 Tax=Sanguiba... 149 4e-34 UniRef50_A1VZC5 ATP-dependent DNA helicase, putative n=30 Tax=Ep... 149 5e-34 UniRef50_A5N879 ATP-dependent DNA helicase n=2 Tax=Clostridium k... 149 5e-34 UniRef50_UPI0001C42BC3 ATP-dependent DNA helicase n=1 Tax=Bacill... 149 5e-34 UniRef50_C8XJ57 UvrD/REP helicase n=1 Tax=Nakamurella multiparti... 149 7e-34 UniRef50_B0CJK1 Double-strand break repair protein AddB n=44 Tax... 149 8e-34 UniRef50_D1BXK8 UvrD/REP helicase n=1 Tax=Xylanimonas cellulosil... 148 1e-33 UniRef50_B6G1B8 Putative uncharacterized protein n=1 Tax=Clostri... 148 1e-33 UniRef50_C6Q0I3 UvrD/REP helicase n=1 Tax=Clostridium carboxidiv... 148 1e-33 UniRef50_B2A610 ATP-dependent helicase/nuclease subunit A n=1 Ta... 148 1e-33 UniRef50_C6JEU5 Putative uncharacterized protein n=1 Tax=Ruminoc... 148 1e-33 UniRef50_B5GJP0 ATP-dependent DNA helicase n=20 Tax=Streptomyces... 148 1e-33 UniRef50_Q31P32 Putative uncharacterized protein n=2 Tax=Synecho... 147 2e-33 UniRef50_C7GAA3 ATP-dependent nuclease subunit A n=2 Tax=Rosebur... 147 2e-33 UniRef50_Q896L9 DNA helicase II n=2 Tax=cellular organisms RepID... 147 2e-33 UniRef50_P12954 ATP-dependent DNA helicase SRS2 n=7 Tax=Saccharo... 147 2e-33 UniRef50_D2RKU1 Exodeoxyribonuclease V n=1 Tax=Acidaminococcus f... 147 2e-33 UniRef50_B5IF83 UvrD/REP helicase domain protein n=1 Tax=Aciduli... 147 3e-33 UniRef50_A8L2I8 UvrD/REP helicase n=6 Tax=Actinomycetales RepID=... 147 3e-33 UniRef50_C8NLR2 Helicase n=5 Tax=Corynebacterium RepID=C8NLR2_COREF 147 3e-33 UniRef50_D1U5K5 UvrD/REP helicase n=1 Tax=Desulfovibrio aespoeen... 147 3e-33 UniRef50_D1C5W7 ATP-dependent nuclease subunit B-like protein n=... 146 4e-33 UniRef50_C5DG97 KLTH0D03498p n=1 Tax=Lachancea thermotolerans CB... 146 4e-33 UniRef50_B1I493 ATP-dependent helicase/nuclease subunit A n=1 Ta... 146 4e-33 UniRef50_A2ST32 ATP-dependent nuclease subunit B-like protein n=... 146 5e-33 UniRef50_C5RQN8 Recombination helicase AddA n=1 Tax=Clostridium ... 146 5e-33 UniRef50_UPI0001788A90 UvrD/REP helicase n=1 Tax=Geobacillus sp.... 146 6e-33 UniRef50_Q0TV46 ATP-dependent helicase/nuclease subunit A n=12 T... 146 6e-33 UniRef50_A7VW13 Putative uncharacterized protein n=4 Tax=Clostri... 146 7e-33 UniRef50_C6CTT6 Recombination helicase AddA n=2 Tax=Firmicutes R... 146 7e-33 UniRef50_C0GDI3 Recombination helicase AddA n=1 Tax=Dethiobacter... 146 7e-33 UniRef50_UPI0001C4301D ATP-dependent nuclease subunit A n=1 Tax=... 145 8e-33 UniRef50_B5YD55 ATP-dependent DNA helicase n=2 Tax=Dictyoglomus ... 145 8e-33 UniRef50_Q027B7 DNA helicase/exodeoxyribonuclease V, subunit A n... 145 8e-33 UniRef50_A1U7Y3 UvrD/REP helicase n=2 Tax=Marinobacter RepID=A1U... 145 8e-33 UniRef50_Q9K917 ATP-dependent DNA helicase n=1 Tax=Bacillus halo... 145 9e-33 UniRef50_A5KIK3 Putative uncharacterized protein n=2 Tax=Ruminoc... 145 1e-32 UniRef50_B0RA37 Nuclease subunit B homolog n=1 Tax=Halobacterium... 145 1e-32 UniRef50_B5Y6N2 ATP-dependent DNA helicase PcrA n=1 Tax=Coprothe... 145 1e-32 UniRef50_Q67MD5 ATP-dependent helicase/nuclease subunit A n=1 Ta... 144 1e-32 UniRef50_Q897M0 ATP-dependent nuclease subunit A n=1 Tax=Clostri... 144 2e-32 UniRef50_Q6FLH1 Strain CBS138 chromosome L complete sequence n=1... 144 2e-32 UniRef50_A2RH77 ATP-dependent helicase/nuclease subunit A n=4 Ta... 144 2e-32 UniRef50_B6R280 Double-strand break repair protein AddB n=1 Tax=... 144 2e-32 UniRef50_C7NJY7 DNA/RNA helicase, superfamily I n=1 Tax=Kytococc... 144 2e-32 UniRef50_C0Z545 ATP-dependent nuclease subunit A n=1 Tax=Breviba... 144 2e-32 UniRef50_C6B123 Double-strand break repair protein AddB n=19 Tax... 144 2e-32 UniRef50_C4Z484 DNA helicase II / ATP-dependent DNA helicase Pcr... 144 2e-32 UniRef50_Q71X99 ATP-dependent helicase/nuclease subunit A n=17 T... 144 3e-32 UniRef50_B5CL82 Putative uncharacterized protein n=3 Tax=Clostri... 144 3e-32 UniRef50_A5V9S0 Double-strand break repair protein AddB n=2 Tax=... 143 3e-32 UniRef50_C0GSZ1 Putative uncharacterized protein n=1 Tax=Desulfo... 143 3e-32 UniRef50_C0FWK5 Putative uncharacterized protein n=1 Tax=Rosebur... 143 4e-32 UniRef50_UPI0001AF17D7 superfamily I DNA/RNA helicase n=1 Tax=St... 143 4e-32 UniRef50_A8ZXL9 UvrD/REP helicase n=1 Tax=Desulfococcus oleovora... 143 4e-32 UniRef50_Q65LJ9 ATP-dependent helicase/nuclease subunit A n=3 Ta... 142 5e-32 UniRef50_A3CVM7 UvrD/REP helicase n=1 Tax=Methanoculleus marisni... 142 5e-32 UniRef50_Q97JY0 ATP-dependent DNA helicase, uvrD-like n=1 Tax=Cl... 142 6e-32 UniRef50_UPI0001C41A7D ATP-dependent DNA helicase UvrD/REP famil... 142 7e-32 UniRef50_C8SXN2 Exodeoxyribonuclease subunit V gamma (Fragment) ... 142 8e-32 UniRef50_C4Z991 DNA helicase II n=1 Tax=Eubacterium rectale ATCC... 142 8e-32 UniRef50_A5D1P3 ATP-dependent helicase/nuclease subunit A n=2 Ta... 142 9e-32 UniRef50_B0TDI0 ATP-dependent helicase/nuclease subunit A n=1 Ta... 142 9e-32 UniRef50_Q2J6E2 UvrD/REP helicase n=1 Tax=Frankia sp. CcI3 RepID... 142 1e-31 UniRef50_C0W129 DNA helicase n=1 Tax=Actinomyces coleocanis DSM ... 142 1e-31 UniRef50_Q5YR01 Putative helicase n=4 Tax=Corynebacterineae RepI... 141 1e-31 UniRef50_C0XV86 Helicase n=1 Tax=Corynebacterium lipophiloflavum... 141 1e-31 UniRef50_B7IGH4 Putative uncharacterized protein n=1 Tax=Thermos... 141 1e-31 UniRef50_UPI0001789963 recombination helicase AddA n=1 Tax=Geoba... 141 1e-31 UniRef50_Q04GY7 ATP-dependent helicase/nuclease subunit A n=1 Ta... 141 1e-31 UniRef50_C6IZE1 Recombination helicase AddA n=1 Tax=Paenibacillu... 141 2e-31 UniRef50_B0RA36 Putative helicase n=1 Tax=Halobacterium salinaru... 141 2e-31 UniRef50_C5B538 Putative DNA helicase II n=1 Tax=Methylobacteriu... 141 2e-31 UniRef50_C5BZ31 UvrD/REP helicase n=1 Tax=Beutenbergia cavernae ... 141 2e-31 UniRef50_B9AD93 Putative uncharacterized protein n=2 Tax=Methano... 141 2e-31 UniRef50_B2GEY4 ATP-dependent helicase/nuclease subunit A n=3 Ta... 141 2e-31 UniRef50_A4XB81 UvrD/REP helicase n=4 Tax=Micromonosporaceae Rep... 141 2e-31 UniRef50_C0ZGU0 Putative ATP-dependent DNA helicase n=1 Tax=Brev... 140 3e-31 UniRef50_B0NBE0 Putative uncharacterized protein n=9 Tax=Clostri... 140 3e-31 UniRef50_C2UN36 ATP-dependent DNA helicase, UvrD/REP n=3 Tax=Bac... 140 3e-31 UniRef50_A9KRX8 UvrD/REP helicase n=10 Tax=Bacteria RepID=A9KRX8... 140 3e-31 UniRef50_B2IGN3 Double-strand break repair protein AddB n=2 Tax=... 139 4e-31 UniRef50_C7XXL2 Recombination helicase AddA n=1 Tax=Lactobacillu... 139 5e-31 UniRef50_B2KE90 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum... 139 6e-31 UniRef50_B2I385 Superfamily I DNA and RNA helicase n=17 Tax=Acin... 139 6e-31 UniRef50_Q2S4M5 Probable ATP-dependent DNA helicase n=1 Tax=Sali... 139 6e-31 UniRef50_Q0G5V1 Putative uncharacterized protein n=2 Tax=Auranti... 139 6e-31 UniRef50_C0FS43 Putative uncharacterized protein n=1 Tax=Rosebur... 139 7e-31 UniRef50_C0GCZ6 ATP-dependent nuclease subunit B-like protein n=... 139 7e-31 UniRef50_D2EH37 Recombination helicase AddA n=1 Tax=Pediococcus ... 139 8e-31 UniRef50_Q1WRS0 ATP-dependent helicase/nuclease subunit A n=3 Ta... 139 8e-31 UniRef50_A4ALD4 ATP-dependent DNA helicase n=1 Tax=marine actino... 139 9e-31 UniRef50_C0VQH4 Helicase n=2 Tax=Corynebacterium glucuronolyticu... 138 9e-31 UniRef50_A8VW69 Phospholipase D/Transphosphatidylase n=1 Tax=Bac... 138 1e-30 UniRef50_A9EBT7 Superfamily I DNA and RNA helicase n=1 Tax=Kordi... 138 1e-30 UniRef50_Q043G6 ATP-dependent helicase/nuclease subunit A n=25 T... 138 1e-30 UniRef50_C5V6X1 DNA helicase/exodeoxyribonuclease V, subunit B n... 138 1e-30 UniRef50_B5RLS9 DNA helicase n=24 Tax=Borrelia RepID=B5RLS9_BORDL 138 1e-30 UniRef50_C0CXS0 Putative uncharacterized protein (Fragment) n=1 ... 138 1e-30 UniRef50_B8HBQ6 UvrD/REP helicase n=1 Tax=Arthrobacter chlorophe... 138 1e-30 UniRef50_B5EW84 ATP-dependent DNA helicase Rep n=1 Tax=Vibrio fi... 138 1e-30 UniRef50_B0MQS7 Putative uncharacterized protein n=1 Tax=Eubacte... 138 1e-30 UniRef50_A7BEI5 Putative uncharacterized protein n=1 Tax=Actinom... 138 1e-30 UniRef50_Q1D938 Putative uncharacterized protein n=2 Tax=Cystoba... 137 2e-30 UniRef50_Q2NB36 Helicase n=4 Tax=Sphingomonadales RepID=Q2NB36_E... 137 2e-30 UniRef50_B8DQ46 UvrD/REP helicase n=13 Tax=Desulfovibrionales Re... 137 2e-30 UniRef50_Q8ERW5 ATP-dependent helicase/nuclease subunit A n=1 Ta... 137 2e-30 UniRef50_UPI0001C352F6 UvrD/REP helicase n=1 Tax=Clostridium hat... 137 2e-30 UniRef50_C5E0S5 ZYRO0G15224p n=1 Tax=Zygosaccharomyces rouxii Re... 137 2e-30 UniRef50_Q2SYL0 Superfamily I DNA and RNA helicases n=2 Tax=Burk... 137 2e-30 UniRef50_B3PJ81 Putative uncharacterized protein n=1 Tax=Cellvib... 137 2e-30 UniRef50_Q1NRJ1 UvrD/REP helicase n=3 Tax=Deltaproteobacteria Re... 137 3e-30 UniRef50_A5ZAT8 Putative uncharacterized protein n=1 Tax=Eubacte... 137 3e-30 UniRef50_B1YKM8 ATP-dependent helicase/nuclease subunit A n=1 Ta... 137 3e-30 UniRef50_C6MIZ6 TonB box domain protein n=1 Tax=Nitrosomonas sp.... 137 3e-30 UniRef50_A1VQ25 UvrD/REP helicase n=1 Tax=Polaromonas naphthalen... 137 3e-30 UniRef50_Q82SW8 Putative uncharacterized protein n=1 Tax=Nitroso... 136 4e-30 UniRef50_C6LEN7 ATP-dependent helicase PcrA n=2 Tax=Clostridiale... 136 5e-30 UniRef50_C1A6C2 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas ... 136 5e-30 UniRef50_Q6CK19 KLLA0F14256p n=1 Tax=Kluyveromyces lactis RepID=... 136 5e-30 UniRef50_A6BJ96 Putative uncharacterized protein n=5 Tax=Clostri... 136 6e-30 UniRef50_Q88U41 ATP-dependent helicase/nuclease subunit A n=3 Ta... 136 6e-30 UniRef50_C4LK53 Putative ATP-dependent DNA helicase II n=1 Tax=C... 136 8e-30 UniRef50_B1XR07 Putative uncharacterized protein n=1 Tax=Synecho... 135 8e-30 UniRef50_C7RGF9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7R... 135 8e-30 UniRef50_C7GZ83 Putative ATP-dependent exoDNAse beta subunit n=1... 135 8e-30 UniRef50_Q1Q4K9 Similar to ATP-dependent DNA helicase subunit Ad... 135 9e-30 UniRef50_C8Q3Z5 UvrD/REP helicase n=2 Tax=Proteobacteria RepID=C... 135 1e-29 UniRef50_A6LK37 Putative uncharacterized protein n=1 Tax=Thermos... 135 1e-29 UniRef50_A3CVL1 UvrD/REP helicase n=4 Tax=Methanomicrobia RepID=... 135 1e-29 UniRef50_Q5WF16 UvrD/REP family ATP-dependent DNA helicase n=1 T... 135 1e-29 UniRef50_C8WYD2 UvrD/REP helicase n=2 Tax=Alicyclobacillus acido... 134 1e-29 UniRef50_C7NJY8 DNA/RNA helicase, superfamily I n=1 Tax=Kytococc... 134 1e-29 UniRef50_Q6AJ72 Probable ATP-dependent DNA helicase, UvrD/REP fa... 134 2e-29 UniRef50_Q0BZ49 UvrD/REP helicase domain protein n=2 Tax=Rhodoba... 134 2e-29 UniRef50_Q3AA35 ATP-dependent helicase/nuclease subunit A n=1 Ta... 134 2e-29 UniRef50_B0NWV2 Putative uncharacterized protein n=2 Tax=Clostri... 134 2e-29 UniRef50_C6PW57 UvrD/REP helicase n=1 Tax=Clostridium carboxidiv... 134 2e-29 UniRef50_D2B0K9 Superfamily I DNA and RNA helicase-like protein ... 134 2e-29 UniRef50_A6GVZ8 Putative uncharacterized protein n=3 Tax=Flavoba... 134 2e-29 UniRef50_C4G8V9 Putative uncharacterized protein n=1 Tax=Shuttle... 134 3e-29 UniRef50_C8PM70 ATP-dependent DNA helicase, UvrD/Rep family n=1 ... 134 3e-29 UniRef50_D0WNM4 Helicase, UvrD/Rep family n=1 Tax=Actinomyces sp... 133 3e-29 UniRef50_C0ERA8 Putative uncharacterized protein n=1 Tax=Neisser... 133 3e-29 UniRef50_Q03NA7 ATP-dependent helicase/nuclease subunit A n=1 Ta... 133 3e-29 UniRef50_B7GQ33 UvrD/REP helicase n=2 Tax=Bifidobacterium longum... 133 3e-29 UniRef50_A9WPI7 ATP-dependent DNA helicase n=1 Tax=Renibacterium... 133 3e-29 UniRef50_A6CGD0 ATP-dependent DNA helicase n=1 Tax=Planctomyces ... 133 4e-29 UniRef50_C7MBM5 DNA/RNA helicase, superfamily I n=1 Tax=Brachyba... 133 4e-29 UniRef50_UPI00019738F0 recombination helicase AddA n=1 Tax=Clost... 133 4e-29 UniRef50_Q2S1K7 Putative uncharacterized protein n=1 Tax=Salinib... 133 5e-29 UniRef50_A4IKW7 ATP-dependent helicase/nuclease subunit A n=94 T... 133 5e-29 UniRef50_D1BAW6 DNA/RNA helicase, superfamily I n=1 Tax=Sanguiba... 133 5e-29 UniRef50_B6ATC9 Double-strand break repair protein AddB n=1 Tax=... 132 5e-29 UniRef50_A4WWS4 RecB family exonuclease-like protein n=41 Tax=Pr... 132 5e-29 UniRef50_D1BPN9 Recombination helicase AddA n=3 Tax=Veillonella ... 132 5e-29 UniRef50_Q3JCF0 DNA helicase/exodeoxyribonuclease V, subunit B n... 132 6e-29 UniRef50_A5ZW44 Putative uncharacterized protein n=2 Tax=Clostri... 132 6e-29 UniRef50_Q1JCJ8 ATP-dependent helicase/nuclease subunit A n=14 T... 132 6e-29 UniRef50_A3TGM2 Putative ATP-dependent DNA helicase n=1 Tax=Jani... 132 6e-29 UniRef50_B2UU61 Rep helicase, single-stranded DNA-dependent ATPa... 132 6e-29 UniRef50_B5GJN9 ATP-dependent DNA helicase n=2 Tax=Streptomyces ... 132 7e-29 UniRef50_Q30SL2 UvrD/REP helicase n=12 Tax=Epsilonproteobacteria... 132 8e-29 UniRef50_D0BK91 ATP-dependent nuclease subunit A n=2 Tax=Granuli... 132 8e-29 UniRef50_A4W0M7 ATP-dependent helicase/nuclease subunit A n=61 T... 132 1e-28 UniRef50_UPI000196B4E2 hypothetical protein CATMIT_00994 n=1 Tax... 131 1e-28 UniRef50_A5UJ85 DNA helicase II n=1 Tax=Methanobrevibacter smith... 131 1e-28 UniRef50_B7RVB6 Putative uncharacterized protein n=1 Tax=marine ... 131 1e-28 UniRef50_A7BEI4 Putative uncharacterized protein n=1 Tax=Actinom... 131 1e-28 UniRef50_B0PD60 Putative uncharacterized protein n=1 Tax=Anaerot... 131 1e-28 UniRef50_C8X4N8 Putative DNA repair protein n=1 Tax=Desulfohalob... 131 2e-28 UniRef50_B4S6V4 UvrD/REP helicase n=2 Tax=Bacteroidetes/Chlorobi... 131 2e-28 UniRef50_A6WGC7 ATP-dependent nuclease subunit B-like n=1 Tax=Ki... 131 2e-28 UniRef50_O26611 DNA helicase II n=1 Tax=Methanothermobacter ther... 131 2e-28 UniRef50_A7HKE9 UvrD/REP helicase n=1 Tax=Fervidobacterium nodos... 131 2e-28 UniRef50_C4G2E3 Putative uncharacterized protein n=1 Tax=Abiotro... 131 2e-28 UniRef50_A0L697 DNA helicase/exodeoxyribonuclease V, subunit B n... 130 3e-28 UniRef50_A6SVL7 Uncharacterized conserved protein n=2 Tax=Oxalob... 130 3e-28 UniRef50_A3VPE1 Putative uncharacterized protein n=1 Tax=Parvula... 130 3e-28 UniRef50_B8ESP3 Double-strand break repair protein AddB n=1 Tax=... 130 3e-28 UniRef50_C4GBK5 Putative uncharacterized protein n=1 Tax=Shuttle... 129 4e-28 UniRef50_B9ZQQ0 UvrD/REP helicase n=1 Tax=Thioalkalivibrio sp. K... 129 4e-28 UniRef50_C0EV13 Putative uncharacterized protein n=1 Tax=Eubacte... 129 6e-28 UniRef50_A2ST33 UvrD/REP helicase n=1 Tax=Methanocorpusculum lab... 129 6e-28 UniRef50_Q0FE32 Putative uncharacterized protein n=1 Tax=Rhodoba... 129 6e-28 UniRef50_Q28JY0 Putative uncharacterized protein n=1 Tax=Jannasc... 129 7e-28 UniRef50_UPI000050F874 UvrD/REP helicase n=1 Tax=Brevibacterium ... 129 7e-28 UniRef50_Q2YB42 DNA helicase/exodeoxyribonuclease V, subunit B n... 129 8e-28 UniRef50_A6CVP4 UvrD/REP helicase n=1 Tax=Vibrio shilonii AK1 Re... 129 8e-28 UniRef50_UPI0001C36633 recombination helicase AddA n=1 Tax=Clost... 129 8e-28 UniRef50_A7IKI5 Double-strand break repair protein AddB n=2 Tax=... 129 8e-28 UniRef50_A8SJB2 Putative uncharacterized protein n=1 Tax=Parvimo... 129 8e-28 UniRef50_C5CB79 DNA/RNA helicase, superfamily I n=1 Tax=Micrococ... 129 9e-28 UniRef50_A6BJS6 Putative uncharacterized protein n=1 Tax=Dorea l... 129 9e-28 UniRef50_B5VVV9 ATP-dependent nuclease subunit B-like protein n=... 128 9e-28 UniRef50_Q0ATK6 Putative uncharacterized protein n=2 Tax=Hyphomo... 128 1e-27 UniRef50_A6NVW3 Putative uncharacterized protein n=1 Tax=Bactero... 128 1e-27 UniRef50_Q0G5V0 Helicase, UvrD/Rep family protein n=2 Tax=Aurant... 128 1e-27 UniRef50_A3YTS6 ATP-depentend DNA helicase n=1 Tax=Synechococcus... 128 2e-27 UniRef50_C5CHI0 Exodeoxyribonuclease V n=1 Tax=Kosmotoga olearia... 128 2e-27 UniRef50_Q2SPC8 Superfamily I DNA and RNA helicase n=4 Tax=Gamma... 127 2e-27 UniRef50_Q836J8 ATP-dependent helicase/nuclease subunit A n=35 T... 127 2e-27 UniRef50_C9KJP8 ATP-dependent nuclease subunit A n=1 Tax=Mitsuok... 127 2e-27 UniRef50_A9VDB1 Predicted protein n=1 Tax=Monosiga brevicollis R... 127 2e-27 UniRef50_UPI0001C41A07 ATP-dependent DNA helicase UvrD/REP famil... 127 3e-27 UniRef50_Q5CVQ2 UvrD like super family I helicase involved in nu... 127 3e-27 UniRef50_Q3DPK7 Exonuclease RexB (Fragment) n=3 Tax=Streptococcu... 127 3e-27 UniRef50_A3DE23 UvrD/REP helicase n=3 Tax=Clostridium thermocell... 127 3e-27 UniRef50_A1HTK7 UvrD-like DNA helicase, C terminal n=1 Tax=Therm... 127 3e-27 UniRef50_Q67RU7 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 127 3e-27 UniRef50_A3Z091 Putative ATP-dependent DNA helicase (PcrA) n=1 T... 127 3e-27 UniRef50_C1XIE9 DNA/RNA helicase, superfamily I n=1 Tax=Meiother... 127 3e-27 UniRef50_UPI0001AEBA9E UvrD/REP helicase n=1 Tax=Alteromonas mac... 126 4e-27 UniRef50_B8FB90 UvrD/REP helicase n=1 Tax=Desulfatibacillum alke... 126 4e-27 UniRef50_C7HA04 ATP-dependent exoDNAse beta subunit n=1 Tax=Faec... 126 4e-27 UniRef50_B8DM59 UvrD/REP helicase n=5 Tax=Bacteria RepID=B8DM59_... 126 4e-27 UniRef50_B7J885 ATP-dependent DNA helicase, UvrD/REP family n=1 ... 126 5e-27 UniRef50_C0W128 ATP-dependent DNA helicase n=1 Tax=Actinomyces c... 126 5e-27 UniRef50_A8PMU2 Putative uncharacterized protein n=1 Tax=Rickett... 126 6e-27 UniRef50_A7HKE8 Putative uncharacterized protein n=1 Tax=Fervido... 126 7e-27 UniRef50_A7HPC8 Double-strand break repair helicase AddA n=1 Tax... 125 9e-27 UniRef50_B1C9D6 Putative uncharacterized protein n=1 Tax=Anaerof... 125 9e-27 UniRef50_B3WEJ1 ATP-dependent helicase/nuclease subunit A n=8 Ta... 125 1e-26 UniRef50_C0BDK3 Putative uncharacterized protein n=1 Tax=Coproco... 125 1e-26 UniRef50_C1D2V9 Putative ATP-dependent nuclease, subunit B (AddB... 125 1e-26 UniRef50_A0JYL6 UvrD/REP helicase n=3 Tax=cellular organisms Rep... 125 1e-26 UniRef50_C6J3M4 UvrD/REP helicase n=2 Tax=Paenibacillus sp. oral... 125 1e-26 UniRef50_B2IQB2 DNA-dependent ATPase I and helicase II n=4 Tax=B... 125 1e-26 UniRef50_D0YTA7 Putative UvrD/REP helicase family protein n=2 Ta... 125 1e-26 UniRef50_Q3SWM3 DNA helicase/exodeoxyribonuclease V, subunit A n... 124 1e-26 UniRef50_C0GR52 UvrD/REP helicase n=1 Tax=Desulfonatronospira th... 124 1e-26 UniRef50_B8DWI6 UvrD/REP helicase n=4 Tax=Bifidobacterium animal... 124 1e-26 UniRef50_A6P133 Putative uncharacterized protein n=1 Tax=Bactero... 124 2e-26 UniRef50_A7NRM2 UvrD/REP helicase n=2 Tax=Roseiflexus RepID=A7NR... 124 2e-26 UniRef50_Q311L2 Putative uncharacterized protein n=1 Tax=Desulfo... 124 2e-26 UniRef50_A9RPQ2 Predicted protein (Fragment) n=1 Tax=Physcomitre... 124 2e-26 UniRef50_C6P6T0 UvrD/REP helicase n=1 Tax=Sideroxydans lithotrop... 124 2e-26 UniRef50_A9CUX4 Putative uncharacterized protein n=7 Tax=Rhizobi... 124 2e-26 UniRef50_A8RAD6 Putative uncharacterized protein n=1 Tax=Eubacte... 124 2e-26 UniRef50_A5CQ87 Putative ATP-dependant DNA helicase/nuclease n=2... 124 2e-26 UniRef50_A7HPC7 Double-strand break repair protein AddB n=1 Tax=... 124 2e-26 UniRef50_B8DL19 Putative uncharacterized protein n=1 Tax=Desulfo... 124 3e-26 UniRef50_Q2B8I4 ATP-dependent DNA helicase, UvrD/REP family prot... 124 3e-26 UniRef50_Q72AD4 Putative uncharacterized protein n=3 Tax=Desulfo... 124 3e-26 UniRef50_Q2SKI4 UvrD/REP helicase family protein n=1 Tax=Hahella... 123 3e-26 UniRef50_C1ZID4 DNA/RNA helicase, superfamily I n=1 Tax=Planctom... 123 3e-26 UniRef50_Q73RK3 ATP-dependent DNA helicase, UvrD/Rep family n=2 ... 123 3e-26 UniRef50_A6L5X5 Putative uncharacterized protein n=19 Tax=Bacter... 123 4e-26 UniRef50_B6WA25 Putative uncharacterized protein n=1 Tax=Anaeroc... 123 4e-26 UniRef50_B1YKK3 UvrD/REP helicase n=1 Tax=Exiguobacterium sibiri... 123 4e-26 UniRef50_Q897P0 DNA helicase II n=1 Tax=Clostridium tetani RepID... 123 4e-26 UniRef50_B2JFG2 UvrD/REP helicase n=33 Tax=Proteobacteria RepID=... 123 4e-26 UniRef50_UPI0000F51769 UvrD/REP helicase n=1 Tax=Ferroplasma aci... 123 5e-26 UniRef50_C2KVI0 Possible ATP-dependent deoxyribonuclease subunit... 123 5e-26 UniRef50_B8KGL7 Putative uncharacterized protein n=1 Tax=gamma p... 122 5e-26 UniRef50_Q3A3V5 DNA helicase/exodeoxyribonuclease V, subunit B n... 122 6e-26 UniRef50_Q1IKH8 DNA helicase/exodeoxyribonuclease V, subunit B n... 122 6e-26 UniRef50_C1PCZ8 UvrD/REP helicase n=1 Tax=Bacillus coagulans 36D... 122 6e-26 UniRef50_Q04AN7 ATP-dependent helicase/nuclease subunit A n=3 Ta... 122 7e-26 UniRef50_UPI0001AF5A75 exodeoxyribonuclease V, gamma subunit n=1... 122 7e-26 UniRef50_B8HWJ9 UvrD/REP helicase n=1 Tax=Cyanothece sp. PCC 742... 122 7e-26 UniRef50_C6QAP4 Double-strand break repair helicase AddA n=1 Tax... 122 8e-26 UniRef50_Q1YTF1 Putative uncharacterized protein n=1 Tax=gamma p... 122 9e-26 UniRef50_B8IZF8 Putative uncharacterized protein n=1 Tax=Desulfo... 122 1e-25 UniRef50_C8ZW81 UvrD/REP helicase n=4 Tax=Enterococcus RepID=C8Z... 122 1e-25 UniRef50_Q0ATK5 DNA helicase/exodeoxyribonuclease V, subunit A n... 122 1e-25 UniRef50_A0Z419 Putative uncharacterized protein n=1 Tax=marine ... 122 1e-25 UniRef50_A5VHK2 ATP-dependent helicase/nuclease subunit A n=10 T... 121 1e-25 UniRef50_B0CJK2 Double-strand break repair helicase AddA n=35 Ta... 121 1e-25 UniRef50_C8X833 UvrD/REP helicase n=1 Tax=Nakamurella multiparti... 121 2e-25 UniRef50_C9LQY5 ATP-dependent nuclease subunit A n=1 Tax=Dialist... 121 2e-25 UniRef50_B2T5W9 UvrD/REP helicase n=37 Tax=Proteobacteria RepID=... 121 2e-25 UniRef50_A0PZA6 Superfamily I DNA helicase (Rep-like helicase) n... 121 2e-25 UniRef50_B5RSV7 DEHA2A13530p n=2 Tax=Debaryomyces hansenii RepID... 121 2e-25 UniRef50_C1F3E1 Putative uncharacterized protein n=1 Tax=Acidoba... 121 2e-25 UniRef50_Q31P33 Putative uncharacterized protein n=2 Tax=Synecho... 121 2e-25 UniRef50_D1B4A6 Putative uncharacterized protein n=1 Tax=Sulfuro... 120 3e-25 UniRef50_A6WX35 Double-strand break repair helicase AddA n=11 Ta... 120 4e-25 UniRef50_UPI0001BC38AF DNA helicase II / ATP-dependent DNA helic... 120 4e-25 UniRef50_C5BPK5 Putative uncharacterized protein n=1 Tax=Teredin... 119 5e-25 UniRef50_C0W6Z3 Possible UvrD/REP helicase n=1 Tax=Actinomyces u... 119 6e-25 UniRef50_B9CK49 Putative uncharacterized protein n=1 Tax=Atopobi... 119 6e-25 UniRef50_Q21J65 DNA helicase/exodeoxyribonuclease V, subunit B n... 119 6e-25 UniRef50_C6W379 UvrD/REP helicase n=1 Tax=Dyadobacter fermentans... 119 7e-25 UniRef50_A9GM05 Putative uncharacterized protein n=1 Tax=Sorangi... 119 7e-25 UniRef50_Q4JGZ3 ATP-dependent deoxyribonuclease chain-like prote... 119 7e-25 UniRef50_A2TR02 Putative uncharacterized protein n=1 Tax=Dokdoni... 119 9e-25 UniRef50_Q1LLG5 DNA helicase/exodeoxyribonuclease V, subunit B n... 118 1e-24 UniRef50_C0EHH1 Putative uncharacterized protein n=1 Tax=Clostri... 118 1e-24 UniRef50_A6DAL9 Putative uncharacterized protein n=1 Tax=Caminib... 118 1e-24 UniRef50_Q3SMQ4 Putative uncharacterized protein n=1 Tax=Thiobac... 118 1e-24 UniRef50_Q1Q555 Similar to DNA helicase n=1 Tax=Candidatus Kuene... 118 1e-24 UniRef50_C0QYG3 UvrD/REP helicase n=3 Tax=Brachyspira RepID=C0QY... 118 1e-24 UniRef50_Q1K0K3 Putative uncharacterized protein n=1 Tax=Desulfu... 118 1e-24 UniRef50_A6BB03 ATP-dependent DNA helicase rep (Fragment) n=3 Ta... 118 1e-24 UniRef50_C8WQE1 UvrD/REP helicase n=1 Tax=Alicyclobacillus acido... 118 1e-24 UniRef50_C8WGH2 ATP-dependent nuclease subunit B-like protein n=... 118 2e-24 UniRef50_D2VUP5 Predicted protein n=1 Tax=Naegleria gruberi RepI... 118 2e-24 UniRef50_Q1W555 UvrD/REP family helicase n=1 Tax=Pseudomonas aer... 118 2e-24 UniRef50_Q2FNI4 UvrD/REP helicase n=1 Tax=Methanospirillum hunga... 117 2e-24 UniRef50_D1VUK5 UvrD/REP helicase n=1 Tax=Peptoniphilus lacrimal... 117 2e-24 UniRef50_B8I7B7 UvrD/REP helicase n=2 Tax=Clostridium RepID=B8I7... 117 2e-24 UniRef50_A8UFJ2 Putative uncharacterized protein n=1 Tax=Flavoba... 117 2e-24 UniRef50_C1F7R1 ATP-dependent DNA helicase, UvrD/REP family n=1 ... 117 3e-24 Sequences not found previously or not previously below threshold: UniRef50_B9DZK4 ATP-dependent helicase/nuclease subunit A n=13 T... 147 3e-33 UniRef50_Q6CK20 KLLA0F14234p n=1 Tax=Kluyveromyces lactis RepID=... 143 3e-32 UniRef50_A6LPC4 ATP-dependent helicase/nuclease subunit A n=4 Ta... 142 1e-31 UniRef50_C7R1Q7 UvrD/REP helicase n=1 Tax=Jonesia denitrificans ... 136 7e-30 UniRef50_A8RRN8 Putative uncharacterized protein n=4 Tax=Bacteri... 134 1e-29 UniRef50_C4V2E5 ATP-dependent deoxyribonuclease subunit A n=2 Ta... 132 7e-29 UniRef50_C0WLM5 ATP-dependent deoxyribonuclease, subunit A n=3 T... 131 1e-28 UniRef50_B6JCP8 Double-strand break repair protein AddB n=15 Tax... 131 1e-28 UniRef50_Q03D71 ATP-dependent helicase/nuclease subunit A n=1 Ta... 129 5e-28 UniRef50_B1XR08 ATP-dependent nuclease subunit A n=1 Tax=Synecho... 128 9e-28 UniRef50_B8N0A9 ATP-dependent DNA helicase, putative n=1 Tax=Asp... 128 1e-27 UniRef50_Q9SW14 Putative uncharacterized protein AT4g25120 n=2 T... 127 3e-27 UniRef50_Q0AXU8 ATP-dependent helicase/nuclease subunit A n=1 Ta... 126 4e-27 UniRef50_B7AS99 Putative uncharacterized protein n=1 Tax=Bactero... 126 4e-27 UniRef50_A8U8N0 Exonuclease RexA n=3 Tax=Lactobacillales RepID=A... 126 5e-27 UniRef50_C6QAP5 Double-strand break repair protein AddB n=1 Tax=... 126 5e-27 UniRef50_UPI0001C37CA2 recombination helicase AddA n=1 Tax=Rumin... 126 6e-27 UniRef50_Q4L4Y3 ATP-dependent helicase/nuclease subunit A n=65 T... 125 9e-27 UniRef50_A6TVN2 ATP-dependent helicase/nuclease subunit A n=2 Ta... 123 3e-26 UniRef50_C6XFZ3 Double-strand break repair protein AddB n=1 Tax=... 122 1e-25 UniRef50_C8RQU8 ATP-dependent DNA helicase II n=3 Tax=Corynebact... 121 1e-25 UniRef50_B5VVV8 UvrD/REP helicase n=2 Tax=Arthrospira RepID=B5VV... 121 1e-25 UniRef50_C8WFT5 Double-strand break repair protein AddB n=3 Tax=... 121 2e-25 UniRef50_C7JGX3 Nuclease n=8 Tax=Acetobacter pasteurianus RepID=... 121 2e-25 UniRef50_A8U0G7 Inactivated superfamily I helicase n=1 Tax=alpha... 121 2e-25 UniRef50_B1MZM2 ATP-dependent helicase/nuclease subunit A n=3 Ta... 119 7e-25 UniRef50_A0PR95 ATP-dependent DNA helicase n=32 Tax=Mycobacteriu... 119 9e-25 UniRef50_Q6G1D2 Putative uncharacterized protein n=1 Tax=Bartone... 118 1e-24 UniRef50_C6R3Z0 ATP-dependent DNA helicase n=1 Tax=Rothia mucila... 118 1e-24 UniRef50_C4L3Q8 Recombination helicase AddA n=1 Tax=Exiguobacter... 117 2e-24 >UniRef50_P07648 Exodeoxyribonuclease V gamma chain n=185 Tax=cellular organisms RepID=EX5C_ECOLI Length = 1122 Score = 1040 bits (2688), Expect = 0.0, Method: Composition-based stats. Identities = 1122/1122 (100%), Positives = 1122/1122 (100%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI Sbjct: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD Sbjct: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG Sbjct: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF Sbjct: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL Sbjct: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR Sbjct: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP Sbjct: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA Sbjct: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA Sbjct: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL Sbjct: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN Sbjct: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL Sbjct: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL Sbjct: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF Sbjct: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR 900 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR Sbjct: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR 900 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ 960 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ Sbjct: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ 960 Query: 961 PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL 1020 PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL Sbjct: 961 PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL 1020 Query: 1021 SQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMM 1080 SQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMM Sbjct: 1021 SQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMM 1080 Query: 1081 VRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS 1122 VRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS Sbjct: 1081 VRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS 1122 >UniRef50_C4K849 Exonuclease V, gamma chain with recB and recD: 5' and 3' nuclease, ATPase, recombinase, helicase n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K849_HAMD5 Length = 1123 Score = 925 bits (2391), Expect = 0.0, Method: Composition-based stats. Identities = 611/1129 (54%), Positives = 793/1129 (70%), Gaps = 29/1129 (2%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M YHSN+LD+L+ L ++E+E L +PF+ E+ILVQS GMAQWLQ+ L+Q GI+ANI Sbjct: 1 MFITYHSNQLDLLKTLTSTLIEKEPLKNPFQKEIILVQSPGMAQWLQIQLAQSLGISANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FPLPA+FIWDMF +VL IPKES FNK +M+WKLM LLP LL+ F ++HYL DD D Sbjct: 61 QFPLPATFIWDMFTKVLKNIPKESPFNKDAMTWKLMCLLPDLLQNPIFASIKHYLQDDED 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 K+K+ QL+ + ADLFDQYLVYR +WL WE G + L + Q WQA LW +L+ Y+ QL Sbjct: 121 KQKIHQLAIRIADLFDQYLVYRSEWLDGWENGKKFDDLNKNQDWQAALWVSLIRYSRQLE 180 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 QP WHRA LYQRFI+ L LP RVFI GIS LPP+YL+ L+AL +H++IH +F Sbjct: 181 QPEWHRARLYQRFIQALNKNDVDSDLLPKRVFIFGISTLPPIYLKGLEALSRHMDIHFMF 240 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NPCRY+WGDI++ LAKL + + E + NPLL Sbjct: 241 NNPCRYFWGDIQNYDILAKLNIKNTSSDLRNIEE-------------------EQINPLL 281 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 ASWG+LGRD++YLLS +E QE+ AFVD+ PDNLLH +Q D+LE +N+A + Sbjct: 282 ASWGRLGRDHLYLLSQIEGLQEIHAFVDIEPDNLLHALQHDMLEFKNQATRHFSESNSHH 341 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + KR LD D SI H CHS QREVE+L D+LL + EDP LTPRD+IVMVADID+Y+P Sbjct: 342 NK-KRLLDINDRSIGVHSCHSQQREVEILQDQLLNLFSEDPALTPRDVIVMVADIDNYAP 400 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +IQAVF +A +RYLP+AISDR+ Q HPVL+ FI LL LP SRF SE VL LL++ L+ Sbjct: 401 YIQAVFSNASLERYLPFAISDRKMTQVHPVLQTFIKLLDLPQSRFSSEQVLGLLEISALS 460 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 +F+I E+ L LR+WV SGIRWG+D++NV++L LP TGQHTW+FGL RM LGYAM+S Sbjct: 461 QKFEIQEKELSLLREWVEGSGIRWGLDNENVQDLSLPITGQHTWQFGLKRMFLGYAMDSQ 520 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 G+W+ VLPYDES+GL AEL+G LA LLM L+IWR+ L R L EWLP+CRD+ AFF Sbjct: 521 AGDWEGVLPYDESTGLAAELIGKLARLLMMLSIWRKKLKTSRLLSEWLPLCRDLFYAFFE 580 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 +AETE+ LI+QQWQ II GL AQY + VP+SL+R +L R + +RISQRFLAGP+N Sbjct: 581 SNAETESIFILIDQQWQNIIQYGLSAQYANTVPVSLIRHDLVTRFENQRISQRFLAGPIN 640 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 CTLMPMRSIPFKVVCLLGMN+G+YPR L PLGFDLM++K ++GDRSRRDDDRYLFLEAL Sbjct: 641 FCTLMPMRSIPFKVVCLLGMNEGIYPRILPPLGFDLMAKKRQKGDRSRRDDDRYLFLEAL 700 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 +SAQQ LYISYIGRSIQDNS+R+PSVLV EL++YIG S+ LPGDE N DES ARV HL Sbjct: 701 LSAQQYLYISYIGRSIQDNSQRYPSVLVSELLEYIGNSYVLPGDENRNSDESMARVIQHL 760 Query: 781 TCLHTRMPFDPQNYQPG-ERQSYAREWLPAA----SQAGKAHSEFVQPLPFTLPETVPLE 835 HTRMPF +N+ G E+QSYA EWL AA + + +F++PL + L+ Sbjct: 761 LFCHTRMPFSAKNFIKGTEQQSYAIEWLEAAKKHTQEQKQPQDDFIKPLVSEPFSEITLD 820 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE 895 L F+ HP++AFFQ+RL V FR E E+ + EPFIL L+RYQ N +LLNAL+EQ + + Sbjct: 821 ELINFYRHPIKAFFQLRLGVQFRVEQKELSNEEPFILAPLARYQFNTELLNALIEQKNVD 880 Query: 896 RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ--SMEIDLACNGVQIT 953 +L+ R +A+G LP+G FGEI+W+ Q EM +A ++ + +E++ ++ Sbjct: 881 QLYARMQASGRLPFGHFGEIYWQQQKNEMGLIAKKIQTETGHTEFCRLEVNTTLGERTLS 940 Query: 954 GWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAA 1013 GW+ Q DGL+RWRPS L++ G+ LW+EHL YC SGG GESR++ +K+ WRF L+ Sbjct: 941 GWIAHAQTDGLIRWRPSTLTIVDGLLLWIEHLAYCLSGGKGESRIYGKKESVWRFSALSQ 1000 Query: 1014 EQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQ 1073 +A +LS IEGY++GM PLL+L SG AWL CYD +N +L D+ T KA+ L Sbjct: 1001 SEAEQHLSLFIEGYQKGMIQPLLLLNHSGWAWLTKCYDLKNRHILWDEKTQAKAKDHLLT 1060 Query: 1074 AYEGNMMV--RGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFN 1120 ++GN RGEGDD + QRL+R + ++ I+++++ +LLP+ N Sbjct: 1061 VFQGNPKTGVRGEGDDPYIQRLFRSINDTHVDRILQEAKNYLLPIAHHN 1109 >UniRef50_A6FE97 Putative exodeoxyribonuclease V n=1 Tax=Moritella sp. PE36 RepID=A6FE97_9GAMM Length = 1130 Score = 920 bits (2378), Expect = 0.0, Method: Composition-based stats. Identities = 496/1138 (43%), Positives = 679/1138 (59%), Gaps = 28/1138 (2%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +YHSN+LD+L+ LM + ++ L DPF E +LVQS GMAQW++M L++ GI+ANI Sbjct: 1 MFNLYHSNQLDILKELMAHFIAKDPLADPFVEEQVLVQSPGMAQWVKMELAKSMGISANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FPLPASFIW MF +VLP+IP +SAFNK++MSWKLM +LP+LL +F L+HYL DD D Sbjct: 61 TFPLPASFIWKMFQKVLPDIPDKSAFNKEAMSWKLMLILPELLVLAEFESLKHYLADDQD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 +LFQL K +D FDQYLVYRP+W+A WE G + WQ LW+ LV T LG Sbjct: 121 DYRLFQLCQKISDTFDQYLVYRPEWIAGWEGGD--NMHADTHPWQPLLWRELVAKTEVLG 178 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 Q +HRANLY +FI L S+T LP R+F+ G+SALPP YL ALQAL H EIH + Sbjct: 179 QSHYHRANLYDQFIARLNSSTFDAKLLPDRIFVFGVSALPPRYLDALQALAMHTEIHFML 238 Query: 241 TNPCRYYWGDIKDPAYLAKLLT--RQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 +NPCR YWGD+ DP +L K T + + D + LF+ D VGNP Sbjct: 239 SNPCRLYWGDLIDPKWLLKQRTMVNHHNVTLGMSDKVSANDEQTVRALFDEDDAFKVGNP 298 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE-- 356 LLAS GKLGRD + LL+ QELD FV+ T D LL +IQ DIL+L +R++A N+ Sbjct: 299 LLASMGKLGRDNLALLTGF-GCQELDVFVEPTDDGLLASIQRDILDLADRSMAEFNVSQQ 357 Query: 357 --EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 S K P++P DSS+ H CHSP RE+EVLH+ LL M E+P L PRD+++M+ D Sbjct: 358 DTNTRDSRYKLPINPADSSLELHSCHSPMREIEVLHNNLLTMFSENPDLNPRDVVIMMPD 417 Query: 415 IDSYSPFIQAVFGSAPA--DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 ++ YSP+IQAVFG+ +RY+P++ISD A+ +P+L +F+ LL+LP SR ++L+ Sbjct: 418 VNGYSPYIQAVFGAMDRYDERYIPFSISDSGAQYDNPILLSFLQLLTLPLSRCNVSELLS 477 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 LL+VP + ARF IT + LRQW++ESGIRWG+D+D+ +LP Q+TW FGL RML Sbjct: 478 LLEVPAVLARFAITPDEFNRLRQWIDESGIRWGLDEDDATRFDLPGMKQNTWLFGLHRML 537 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 LGYA +Q +LPY E G+ AEL+G LA + L L + + +W+ + Sbjct: 538 LGYAYG-GDDIYQGILPYQEVQGIEAELLGKLAHFIEALLDSLTSLQDPKSIADWIKLGN 596 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 +++ F+ D + E ++ +I + + + A Y + +LR L L Q SQ Sbjct: 597 TLIDNFYKIDVDDEQSIKMIRDAFSHLDEQLKSASYDKHITPLVLRHYLNNALSQVGASQ 656 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 +FLAG VN CTLMPMRSIPFKV+CLLGMNDGVYPR + P+GFDLM+ K+GDRSRRDDD Sbjct: 657 KFLAGQVNFCTLMPMRSIPFKVICLLGMNDGVYPRSIPPMGFDLMANDLKQGDRSRRDDD 716 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 RYLFLEALISAQ KLYISYIG SI+D SER PSVL+ EL+ Y QS + GDE L+ DES Sbjct: 717 RYLFLEALISAQSKLYISYIGSSIRDKSERLPSVLITELLQYCQQSFCITGDEGLSPDES 776 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP--- 829 A++ HL H PFD + + P S+A+EWLPA + + +PLP + Sbjct: 777 AAQLLTHLIQHHALQPFDARYFNPQAPTSFAKEWLPALAPVVELRQFLTEPLPALISNDD 836 Query: 830 -ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 + V L L RF+ HP + FF RL+V F ++ D EPF ++ L +Y + QLL Sbjct: 837 MQEVELAELLRFYRHPTKYFFNRRLKVYFNQASLDVLDDEPFDVDNLEKYHLKAQLLETE 896 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG-QSMEIDLAC 947 + D + R A+G LP G FG+I + + + QLA ++ +E+D+ Sbjct: 897 LMGGDISLVTERLVASGSLPLGRFGKISLDKEVSTVSQLAQVLMPLLTNSNDDIEVDIPL 956 Query: 948 NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFL----RKD 1003 ++ GWL + GL+R +PS + +Q+WLEHL +C S N + + K Sbjct: 957 VSGRLFGWLKHIYNGGLVRHKPSGFNGKDYLQVWLEHLCFCISIKNPAATTLVHLTAGKP 1016 Query: 1004 GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDST 1063 R + +A L QL E Y +G PL + P++G W KT Sbjct: 1017 VVQRLRVIDQSRARELLFQLFEVYNDGCCQPLALFPKTGWGWAKTKCT-------TAALD 1069 Query: 1064 LQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 K R + + +EG GE D + QR + +L E + + S+ L P+F + + Sbjct: 1070 DYKLRAEAVLNFEGGYNRMGENADDYLQRSFPRLNDEVYKLMSASSESVLFPIFEYLE 1127 >UniRef50_D0ICS0 Exodeoxyribonuclease V gamma chain n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0ICS0_VIBHO Length = 1131 Score = 916 bits (2366), Expect = 0.0, Method: Composition-based stats. Identities = 516/1137 (45%), Positives = 709/1137 (62%), Gaps = 25/1137 (2%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M VYHSN+LD+L++L+ I++ + LD+PF+ E+ILVQS GMAQWL++ ++++ GIAAN+ Sbjct: 1 MFTVYHSNQLDLLKSLLVAIIQSKPLDNPFQKELILVQSPGMAQWLKLEMAKEQGIAANV 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +FPLPA+FIW MF ++L ++P+ S FNK++M+WKLMT+LP+ L+ DF LR YL D D Sbjct: 61 EFPLPATFIWQMFTQILDDVPQRSFFNKEAMTWKLMTVLPEKLDEPDFDELRRYLDGDDD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 ++KL+QL+ K AD++DQYLVYRP+W+ WE V+ L E + WQA LW+AL +YT QLG Sbjct: 121 QQKLYQLAGKIADIYDQYLVYRPEWIKAWENEQPVDELAEEKRWQAVLWQALYDYTLQLG 180 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLP--SRVFICGISALPPVYLQALQALGKHIEIHL 238 Q +HRANLY+ FI+ L S P GL RVF+ GISALPP YL AL+ALG+HI++H Sbjct: 181 QSPFHRANLYEEFIDVLSSHKEKPEGLQGIDRVFVFGISALPPRYLDALKALGEHIDVHY 240 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 +FTNPCRYYWGDI+D YLAK R ++ A L D +VGN Sbjct: 241 MFTNPCRYYWGDIRDKRYLAKRAASM--APRISRASDTEEPAQFALPLMGEDDTAEVGNS 298 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 LLAS GKLGRD + L+S+L+ + FV+V D+LLH+IQ+DIL+L NI+E Sbjct: 299 LLASMGKLGRDNLLLISELQCHEVDQGFVEVPRDSLLHHIQADILDLVEP----ENIQET 354 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 S++K P+ D S+ VCHSP REVEVLHDRLL MLE DPTL+PRDIIVMVADI++Y Sbjct: 355 LTSESKLPVSADDRSLMVEVCHSPMREVEVLHDRLLDMLESDPTLSPRDIIVMVADINAY 414 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 SP IQAVFG+AP +R++P++ISDR A Q P+L F+ LLSLPDSR + ++L +L++P Sbjct: 415 SPAIQAVFGNAPGERFIPFSISDRTADQESPILTTFLRLLSLPDSRCSAAELLEILELPA 474 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 + +F ++ WV E+GIRWG+DD+ LP Q+TW FGL RMLLGYAM Sbjct: 475 VMRKFGFDNRQFEKVKLWVEEAGIRWGLDDNTASHFSLPHQHQNTWLFGLNRMLLGYAMP 534 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 S+ G + VL YDE GL AEL G L + + + L + E W+ + + Sbjct: 535 SSAGLYNDVLAYDEVQGLEAELAGKLGAFFRVMTATQTALLDTKNGEGWIQTLTSLFDDM 594 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 F D + E A LI Q + + A + + L ++RD L ++L ER+SQRFLAG Sbjct: 595 FALDTDEELAGQLIRTQLDNWLTQLDDAGFTQTLALPIVRDYLKEKLGGERVSQRFLAGQ 654 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 VN CTLMPMRSIPF+VVCLLGMNDG YPR +AP+GFDLM+ + + GDRSRRDDDRYLFLE Sbjct: 655 VNFCTLMPMRSIPFQVVCLLGMNDGDYPRTIAPVGFDLMAGRTRAGDRSRRDDDRYLFLE 714 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 AL SAQQ+LYISY+GRS+QDNSE+ PSVLV EL+DY Q + L GD++L ES R+ Sbjct: 715 ALQSAQQRLYISYVGRSVQDNSEKVPSVLVTELLDYCRQGYCLAGDQSLPEHESGQRLLG 774 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF-----VQPLPFTLPETVP 833 L + +PF Q + R+SYA EWLPAA G A + F + P P + Sbjct: 775 TLVHHNPLVPFSKQAFSQ-NRRSYAAEWLPAARGEGHAAAPFLDGRALNPAPDLDIGVIE 833 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE--- 890 L LQRFW PV+ FF RL+V F + + + + EPF L+ L RYQ+ LL+ ++ Sbjct: 834 LAELQRFWRLPVQYFFNRRLKVFFESPEGAMEEAEPFALDNLRRYQLRDALLSHVMAKGD 893 Query: 891 -QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ-PGQSMEIDLAC- 947 + + F++ +A+G LP FGE+ E++ + R+ Q++EI+L Sbjct: 894 SEASLDAFFKQQKASGALPLSHFGELALESEQAGILAQYQRLKPMIADKRQALEINLTLV 953 Query: 948 ---NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDG 1004 V++ GWL + G + +R + + W++HL CA+G F+ D Sbjct: 954 TSRGTVKLQGWLDERYRAGRILYRSGKVRAQDRLSAWIDHLCQCAAGE-ALDTCFIGVDE 1012 Query: 1005 EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTL 1064 + + ++AE A+ L +E Y G APL LP + A L C D +DD T+ Sbjct: 1013 DVVWSAVSAESAITALVDYVEYYLAGTEAPLAFLPNTAMAGLSACIDKDG-HWSEDDVTM 1071 Query: 1065 QKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 KAR+K A+EG MV GEG++ + R+W Q ++ + E + LLP + Sbjct: 1072 DKARSKMRAAFEGGYMVSGEGENTYIARVWPQADDALLDTVFELGKAVLLPALDGEK 1128 >UniRef50_B6EGE9 Exodeoxyribonuclease V gamma chain n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EGE9_ALISL Length = 1127 Score = 893 bits (2308), Expect = 0.0, Method: Composition-based stats. Identities = 482/1138 (42%), Positives = 686/1138 (60%), Gaps = 32/1138 (2%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M VYHSN+LDVL++L+ ++ LD+PFE E ILVQS GM+QWL++ L+++ GIAAN+ Sbjct: 1 MFTVYHSNQLDVLKSLVVELIRLNPLDNPFEQEQILVQSPGMSQWLKIELAKELGIAANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FPLPA+FIWD+F +VL ++PK SAFNK++M+WK++TLLP+LL++++F L+ YL +D Sbjct: 61 TFPLPATFIWDLFTQVLDDVPKRSAFNKEAMTWKIVTLLPELLKQDEFAPLQRYLENDDK 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + K +QL++K AD+FDQYLV+RP+W+ +WE G V L WQ LW+AL + T LG Sbjct: 121 QLKCYQLAAKIADIFDQYLVFRPEWIQKWEAGEEVIELEGEHPWQPILWQALYDQTLALG 180 Query: 181 QPRWHRANLYQRFIETLES---ATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIH 237 +HRAN+++ FIETLE+ T P G+P R+F+ GI++LPP YL AL ALG+HI++H Sbjct: 181 HSPYHRANMFEHFIETLENYLQTGTLPKGMPKRLFVVGITSLPPRYLDALAALGQHIDVH 240 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 L+FTNPC++YWGD++D YLAKL + R +L + ++ S+ N Sbjct: 241 LMFTNPCQHYWGDLRDNKYLAKLDRQNRIAKRLSSDLSTLENDDSDLFTNKSE------N 294 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 LLASWGKLGRD LL DLE + E FV ++LLH+IQSDIL LE R+ V Sbjct: 295 SLLASWGKLGRDNFQLLLDLEPN-EYKIFVPTGREDLLHSIQSDILNLEERSRDDV---- 349 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 S++K+P+ P D SI H CHSP REVEVLHD+LL M DP L PRDIIVMVADI+ Sbjct: 350 LDNSEHKQPISPDDRSILLHSCHSPMREVEVLHDQLLDMFANDPELKPRDIIVMVADINV 409 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 YS IQAVFG+A DRY+P+AISD+ A Q +PVL AF++L++LP++R ++L+LL+VP Sbjct: 410 YSAAIQAVFGNAAFDRYIPFAISDQSAEQENPVLLAFMNLMALPENRCGLSELLSLLEVP 469 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + +RF E +++W E+GIRWG+D+ +LP Q++W FG+ RMLLGYAM Sbjct: 470 AVMSRFKFNAEQFEIVKRWAEETGIRWGLDNSTSAHFDLPEHNQNSWLFGIQRMLLGYAM 529 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 E G ++ + Y++ G+ AE+ G+LA + QL ++ L Q + + W + +++ Sbjct: 530 EQDAGLFEGMASYEQVQGMNAEIAGNLAHFIDQLLTYQITLGQAQKINAWRTIINQLMDD 589 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 F L + E E + I Q Q + A + + ++ + L L + SQRFLAG Sbjct: 590 FLLVELEGELVVKSIRDQLQKLEENLEDAGFDAPISAPIINNYLKNNLSGGKASQRFLAG 649 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 VN CTLMPMRSIPF V+CLLGM DG YPR + GFDLM ++ K GDRSRRDDDRYLFL Sbjct: 650 KVNFCTLMPMRSIPFDVICLLGMTDGSYPRTMPVEGFDLMQKRMKPGDRSRRDDDRYLFL 709 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 EAL SA + Y+SYIGRSI+DN+E+ PSVLV EL++Y QS+ L GD LN +ES + Sbjct: 710 EALQSANKAFYLSYIGRSIRDNTEKAPSVLVSELLEYCQQSYCLDGDSELNPEESAKHLV 769 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE--TVPLE 835 LT H +P+ Q++ SYA EWLP A G+A EF PE + L Sbjct: 770 KKLTIEHPLVPYSQQSFVGDN-TSYASEWLPTAKLEGQAAPEFQTEPLVFAPESKELELT 828 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE 895 LQRFW PV FF L+V F T +S + D EPF ++G + Y + +LL L+ DD Sbjct: 829 ELQRFWRLPVAYFFNRGLKVFFETVESRVEDDEPFSIDGRTGYGMKSELLEELLAYDDPN 888 Query: 896 -------RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI-----ACRQPGQSMEI 943 +++ +A G LP G+FGEI + + +++L D + + Sbjct: 889 QVFQLSREFYQQQKAQGKLPIGSFGEIAADKEVNTVKELVDHIQPLTTSPLEDQEVRLRF 948 Query: 944 DLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKD 1003 +++ GWL Q +G+LR+R + + + W++HL CA + D Sbjct: 949 TFPHGEMELQGWLKQRYKEGMLRYRGGKIRSHEVLATWIDHLCLCAMKQQ-QFTHLFGTD 1007 Query: 1004 GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDST 1063 + F P+ E+A +L ++ Y G APL LP++ A L+ D + DDD T Sbjct: 1008 AIYHFEPIETEKAYQHLEVILSLYISGNCAPLPYLPKAALAGLEAHIDKKGV-WNDDDET 1066 Query: 1064 LQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 +KA K Y G GE + + R+W + E + I + ++ L ++ Sbjct: 1067 HEKALKKMADEYSGTRYA-GENSNDYVMRMWPEWNDELGQTIFDNAKNVLHDALLHSE 1123 >UniRef50_A1SUW0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Psychromonas RepID=A1SUW0_PSYIN Length = 1149 Score = 891 bits (2303), Expect = 0.0, Method: Composition-based stats. Identities = 463/1147 (40%), Positives = 661/1147 (57%), Gaps = 41/1147 (3%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M RVYHSN+L +L+ L+ +++ +L DPF E ILVQS GMAQWLQ+ ++Q GI+ANI Sbjct: 1 MFRVYHSNQLALLKDLLVALMQGAKLTDPFASETILVQSPGMAQWLQLEIAQSTGISANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DFPLPASFIW F VL ++P +S FNK SM+W++M LLP LE DF+ L HYL DD Sbjct: 61 DFPLPASFIWQQFKHVLKDVPDKSPFNKMSMTWQIMRLLPDCLEDPDFSALLHYLEDDLY 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETG-------------HLVEGLGEAQAWQAP 167 RK FQLS K AD+FDQYLVYRP+W+A WE + E Q WQA Sbjct: 121 LRKRFQLSQKIADIFDQYLVYRPEWIAAWENASEQEISQWHAENTESIPAWLEDQRWQAK 180 Query: 168 LWKAL---VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYL 224 LWK L + + + +HRA LY+ F++TL + T LP R+F+ GISALP YL Sbjct: 181 LWKKLTLTIAESFKAQGKAYHRAGLYKDFLDTLATKKTL-EHLPKRIFVFGISALPESYL 239 Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFED-------RELPLF 277 QAL L +H ++H L TNPCRYYW DI DP LAK + R+ + Sbjct: 240 QALLGLAEHCDVHFLLTNPCRYYWADIVDPKLLAKRFAQSRQKLTVSGGEIKNLPDSSWQ 299 Query: 278 RDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHN 337 +D+ + ++D + +VGNPLLAS GK+GRD+++ L LE QE+DAFVD+T D+LLH+ Sbjct: 300 KDASHLQWSQSNDPDNEVGNPLLASMGKMGRDFLFQLYSLEQ-QEVDAFVDITRDSLLHH 358 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 IQ+D+L+L++ + A + L P +S+T H+CHS REVE+LHD LLAM Sbjct: 359 IQADVLDLQDSSQALS-----KDPSARISLAPEGNSLTLHLCHSVMREVEILHDNLLAMF 413 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 D LTP+DIIVMV DID Y+P++QAVF S +RY+P++ISD A+Q +P+L +F+ L Sbjct: 414 AADNNLTPKDIIVMVPDIDQYAPYVQAVFASVEQNRYIPFSISDVSAQQENPILISFLQL 473 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L+L +R+ ED+LALL+VP + RF++ ++ L++W+NESGIRWG+D+ + + +LP Sbjct: 474 LNLNQTRYTREDILALLEVPAILQRFNLNQDEFVLLQKWINESGIRWGLDEKSAAQWDLP 533 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 Q++W FG+ RMLLGYA+ ++ + YDE GL +L+G + L + G Sbjct: 534 RLSQNSWLFGIRRMLLGYAISD--TLFEGISAYDEIQGLQGDLLGRFIDFIDALIKLQEG 591 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 L Q +W +L F+ D + ++LI + ++ A + + L +L Sbjct: 592 LKQSYNANQWQAFVYQLLEDFYQEDDDNTMVLSLIRNEMDNLLDHTGQADFTQPISLFVL 651 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 + L Q L + SQRFLAG VN CTLMPMRSIPFKVVCLLGMNDG YPR + P+GFDLM Sbjct: 652 IEHLEQHLSDQGNSQRFLAGQVNFCTLMPMRSIPFKVVCLLGMNDGQYPRNIVPMGFDLM 711 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 + KRGDRSRR++DRYLFLEAL+SAQ+K YISYIGR I DNSE+ PSVLV EL++Y Q Sbjct: 712 AGHRKRGDRSRREEDRYLFLEALLSAQEKFYISYIGRDINDNSEKMPSVLVSELLNYCQQ 771 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH 817 S L ++ +E +KA ++ + F + YQ + +Y W A A A Sbjct: 772 SFVLKDNQQDQNRVAEKALKAFISFHYPMQSFSERYYQGDVK-TYNPNWWAALKDAKNAG 830 Query: 818 SEFVQPLPFTLPE--TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 + + L VPLE L++F HP + FF RL V F +D + + EPF L Sbjct: 831 EKSHKRLLTLDQSLTEVPLEQLKQFLKHPCKVFFNQRLDVYFELDDDQQENDEPFSFNHL 890 Query: 876 SRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC- 934 +Y + + +E + LF RAAG LP+G F + + + M+ LAD + Sbjct: 891 QQYVLKHEQFEYALEGKSLDNLFIEKRAAGKLPFGEFAALIFTKDLEPMENLADLTTSYF 950 Query: 935 RQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNG 994 +++ ID+ ++ G L GL+R + + + LWLEHL YC + G Sbjct: 951 IGEIETINIDIQFAEKRLFGELNDHCEKGLVRVKTGNIKGKDILTLWLEHLCYCIASGQN 1010 Query: 995 ESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQN 1054 + L + + F L A+ A + +S+L+ Y G+ PL +S AW + + + Sbjct: 1011 LNSTLLGQKEGFYFKELPADYAYNRISELLALYEAGLQQPLPFFIQSAFAWCEQVHKLEP 1070 Query: 1055 DAMLDDD---STLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQR 1111 + + DD +T+ +A+ + N EG D + R + L +A + + Sbjct: 1071 NCFVFDDLEFATIAEAQQVASLCF-SNDRGFSEGQDPYINRCYENLED-HWDAFQPLALK 1128 Query: 1112 FLLPLFR 1118 +P+ Sbjct: 1129 IFMPILS 1135 >UniRef50_Q2BKD9 Exodeoxyribonuclease V, 125 kDa subunit n=2 Tax=Neptuniibacter caesariensis RepID=Q2BKD9_9GAMM Length = 1092 Score = 888 bits (2294), Expect = 0.0, Method: Composition-based stats. Identities = 473/1121 (42%), Positives = 662/1121 (59%), Gaps = 40/1121 (3%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +VYHSN L VL+ L+ ++ R+ + DPF E ILVQS GMAQWL++ L+ K GIAA+I Sbjct: 1 MFQVYHSNSLLVLKDLLTELIRRDPISDPFVAEQILVQSPGMAQWLKLELADKSGIAASI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DFPLPASF+W F VLP++P+ SA+NK++MSWKLM +LP +L++ F+ L+ YL DD D Sbjct: 61 DFPLPASFLWKHFSEVLPDVPERSAYNKEAMSWKLMAVLPAMLKQPVFSALQQYLADDDD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + +L+QL +K AD++DQYLVYRPDW+ WE G + WQ LW+ L YT L Sbjct: 121 RFRLYQLCNKIADIYDQYLVYRPDWIEDWEQGGDIA--AARHPWQPVLWRELKSYTEDLQ 178 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 Q WHRAN++ F++ L++ + LP R+F+ GISALP Y+ ALQALGK I++HL+ Sbjct: 179 QSHWHRANMFSAFVDGLKNPS-AAEKLPRRLFVFGISALPQNYVHALQALGKRIDVHLMV 237 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NPCRYYWGDI D + +A+L R + GNPLL Sbjct: 238 MNPCRYYWGDILDQSQIARLNRRWFSKP------------------DLDFSDYAEGNPLL 279 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 AS GKLGRDY+Y L D + E+DA+ D +LL IQ DIL+LEN E+ Sbjct: 280 ASMGKLGRDYLYQLQD-NALDEIDAYADPERGSLLSAIQQDILDLENPTR---LPEQIDN 335 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 S K LD D SI H CHS RE+EVLHD+LL M E++P L PRD+IVM+ D+ +Y+P Sbjct: 336 SHGKHRLDREDRSIELHSCHSALREIEVLHDQLLDMFEKNPLLKPRDVIVMMPDVAAYAP 395 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +I+AVF +APA+RY+PY+ISDR RQ +P+L +F +L L SRF DVL LL+VP + Sbjct: 396 YIEAVFANAPAERYIPYSISDRSNRQENPLLLSFEKILKLNSSRFTVSDVLELLEVPAVM 455 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 R + E+ + LR WV++ IRWG+D + ELP Q++WRFG+ RML+GYA+ Sbjct: 456 RRVGLDEKSFQKLRFWVDQVNIRWGMDSEQRSIWELPLFEQNSWRFGIKRMLVGYALGEG 515 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 WQ V PY E GL +EL+G LA + L+ R Q+ W+ V +L +F Sbjct: 516 SEYWQGVAPYTEIEGLESELLGKLAGFIDLLDETRLHFTQDHEFSTWIEVINQILENYFT 575 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 D + E ++ I + Q + + A Y A+ S++ L ++Q+R SQRF+ G VN Sbjct: 576 ADEQDEISLNTIRKTLQGLQEQLKDANYSQALSPSVIAHYLIDGINQQRSSQRFMVGSVN 635 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 CTLMPMRSIPF VVCLLGMNDG YPR + P+GFDLM+ P+RGDRSRRDDDRYLF+EAL Sbjct: 636 FCTLMPMRSIPFSVVCLLGMNDGTYPRSIPPVGFDLMTDYPRRGDRSRRDDDRYLFMEAL 695 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 +SAQ+KLYISYIGRSI+DN+E+ PSVLV EL+DY Q + L GDE L+C S +++AH+ Sbjct: 696 LSAQEKLYISYIGRSIRDNNEKIPSVLVSELLDYAEQGYVLEGDEELSCSNSGEKLRAHI 755 Query: 781 TCLHTRMPFDPQNY-QPGERQSYAREWLPAASQAGKAHSEFVQP-LPFTLPETVPLETLQ 838 H + F P+ + G+ S+A EWLPAA +A F+ L + L+ L Sbjct: 756 KTQHPLVAFSPEYFKSAGDYFSFASEWLPAAQAESRAAEVFLTEDLTSEALPELELKQLI 815 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF 898 F P R+FF RL+V F + E D EPF L+ LS Y + Q+ L + ++ D ERL Sbjct: 816 SFLRDPCRSFFNNRLKVYFGNSEIEAQDEEPFSLDNLSSYLLKQRYLQSALQDRDLERLD 875 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP-GQSMEIDLACNGVQITGWLP 957 + A G LP GE+ + +LA+++ + Q +EI+L+ V++ GWL Sbjct: 876 KAILAEGRLPLARAGELNLNKLRHDSLELAEKLKPLSEGTPQRIEINLSIGEVKLQGWLD 935 Query: 958 QVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQAL 1017 PD LLR+RP+ ++ + W+EHL CAS + ++ G+ + + AE+A Sbjct: 936 SCYPDHLLRYRPAQVNARDRLSTWVEHLALCASNQACRNTVYRGLSGKVFYKAVPAEKAT 995 Query: 1018 HYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEG 1077 L+ LI Y++G +AP S + + K + + G Sbjct: 996 ELLADLIRFYQQGQTAPQAFDAGSAHKYFEQ-----------QAKDPDKVMSALENQFYG 1044 Query: 1078 NMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 + G D+ + +R + P + + ++R PL Sbjct: 1045 SAYSNGLQDNPYLRRAFSDFEPF-VTQFIPLAERIYEPLLS 1084 >UniRef50_C9PLM5 Exodeoxyribonuclease V gamma chain n=5 Tax=Gammaproteobacteria RepID=C9PLM5_VIBFU Length = 1173 Score = 878 bits (2268), Expect = 0.0, Method: Composition-based stats. Identities = 517/1171 (44%), Positives = 715/1171 (61%), Gaps = 61/1171 (5%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M VYH+N++D L+ L+ +++ + L +PFE E ILVQS GM+QWL+M L+Q+ G+AAN+ Sbjct: 1 MFTVYHANKVDTLKILLVHLIKNDPLANPFEKEQILVQSPGMSQWLKMALAQELGVAANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DFPLPA+FIW+MF +VLP +PK SAFNK++M+WKLM LLP L+++ F LR YL DD+D Sbjct: 61 DFPLPATFIWEMFTQVLPNVPKRSAFNKEAMTWKLMELLPSQLDQDVFAPLRRYLQDDTD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + KL+QL+ K AD+FD YLVYRPDW+A WE G V + WQ LWKAL +YT G Sbjct: 121 QSKLYQLAEKIADIFDGYLVYRPDWIAHWEAGESVAEIDGEHPWQPVLWKALYDYTLAQG 180 Query: 181 QPRWHRANLYQRFIETLESATT-----CPPGLPSRVFICGISALPPVYLQALQALGKHIE 235 Q +HRANLYQ FI+ L LP R+FI GIS+LPP Y+ AL+ALG+HI+ Sbjct: 181 QSHYHRANLYQSFIDALAHIDLTHDEALRAALPKRLFIFGISSLPPRYMDALKALGEHID 240 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRH-----------SFEDRELPLFRDSENAG 284 +HL+FTNPC++YWGDI+D YLA++ +++R+ + E+ + + Sbjct: 241 VHLMFTNPCQHYWGDIRDRKYLARVESQRRKQLVLHPNAETHTFTVEGEVSPLKGELDDY 300 Query: 285 QLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE 344 Q VGN LLAS GKLGRD +YLL+ ++E + F+DV D+LLH +Q+DIL Sbjct: 301 AGDELHTAQAVGNSLLASMGKLGRDNLYLLAQ-SDNEEHELFIDVPRDSLLHQLQADILH 359 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 LE + S +K L D S+T H CHSP REVEVLHD LLAM + DP L Sbjct: 360 LEE----HQDDTLLDSSAHKPALPHGDRSLTLHACHSPMREVEVLHDELLAMFDRDPELK 415 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 PRDIIVMVADI++YSP+IQAVFG+AP +R++PY+ISDR A Q P+L AF+ L++LP SR Sbjct: 416 PRDIIVMVADINAYSPYIQAVFGNAPGERFIPYSISDRTADQESPILNAFMQLVALPQSR 475 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 ++ ++L LL+ P + ARF + ++WV ESGIRWG++D +E ELP T Q+TW Sbjct: 476 CLASELLELLETPAMMARFALDASEFDTAKRWVEESGIRWGLNDATAQEFELPQTHQNTW 535 Query: 525 RFGLTRMLLGYAMESAQGEWQ----SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 +FG+ RMLLGYAM S+ G ++ ++ PY+E G+ AEL G LA + ++ +R+ LAQ Sbjct: 536 QFGIARMLLGYAMPSSVGLFEAGGHAMAPYNEVQGMSAELAGKLAHFIDTISDYRQRLAQ 595 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 +P+E W + +L+ F D + E A+ I A+ + A Y DA+ +++ Sbjct: 596 TQPIEAWRELLSSLLDDCFSVDLDGEMALKSIRDTLAALKEQLADAGYADAISPAIMGQY 655 Query: 641 LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 L +L R+SQRFLAG VN CTLMPMRSIPF VVCLLGMNDGVYPR + P GFDLM+ + Sbjct: 656 LHDKLSGTRVSQRFLAGQVNFCTLMPMRSIPFNVVCLLGMNDGVYPRSMPPEGFDLMNGR 715 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 + GDRSRRDDDRYLFLEA++SAQ LYISY+GRSIQDN+ER PSVLV EL++Y Q++ Sbjct: 716 TRPGDRSRRDDDRYLFLEAMLSAQHTLYISYVGRSIQDNTERVPSVLVTELLEYCQQNYC 775 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF 820 L GDEAL DES AR+ L H +PF PQ + SYA+EWLPAA + G A F Sbjct: 776 LAGDEALPSDESGARLIEQLQFTHAMVPFSPQAFLTDV-GSYAKEWLPAALRQGTASGTF 834 Query: 821 VQP-----LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 + L P + L LQRFW PV+ FF RL+V F + D EPF L GL Sbjct: 835 HRALDDYLLDAIYPLELDLVELQRFWRLPVQYFFNRRLKVVFEPPLPVMEDDEPFALGGL 894 Query: 876 SRYQINQQLLNALV-------EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLA 928 + YQ+ LL+ L+ + + ++ RA G LP GAFGE+ +ET + ++L Sbjct: 895 ASYQLRDALLDGLLNAPSAQARDEVLAQFNKQQRAQGKLPVGAFGELEFETNRVQAEELV 954 Query: 929 DRVIAC-RQPGQSMEIDLACN------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW 981 ++V + P ++++L V ++GWL + GL+R+R + + W Sbjct: 955 EKVQFLCQAPLDDLDVNLTLTALGQSRPVHLSGWLTRRYQSGLVRYRSGAIRSEDMLAAW 1014 Query: 982 LEHLVYCASGGNGESRL--FLRKDGEWR--FPPLAA------EQALHYLSQLIEGYREGM 1031 ++HL ASG N + + + RKDG PPL A AL L++L Y +GM Sbjct: 1015 IDHLAAAASGANLITHVIGYDRKDGVVHQVLPPLNANASESAALALAQLNELARLYYQGM 1074 Query: 1032 SAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQ 1091 +APL P++ A ++ + + +K+ K + + M GEG++ + Sbjct: 1075 TAPLAYFPKTALASVEAGF-----SRGQWVDDEEKSLKKMAETFNDGFMTSGEGNNHYIA 1129 Query: 1092 RLWRQLTPETMEAIVEQSQRFL-LPLFRFNQ 1121 RLW Q T E + + L P + Sbjct: 1130 RLWPQWTDELAHQVRVLASLVLQAPRLQLRD 1160 >UniRef50_A4SSU8 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Aeromonas RepID=A4SSU8_AERS4 Length = 1134 Score = 847 bits (2189), Expect = 0.0, Method: Composition-based stats. Identities = 488/1167 (41%), Positives = 668/1167 (57%), Gaps = 82/1167 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +YHSN+LD+L+ L+ + + L PFE E +LVQS GMAQWL++ L++ FGIAANI Sbjct: 1 MFTLYHSNQLDLLKELLVNHIRQAPLAHPFEQEQVLVQSPGMAQWLKLELAKAFGIAANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYL----- 115 +FPLPASFIW+MF RVL ++P++S +NK +MSW+LMT+LP LL+R F L YL Sbjct: 61 EFPLPASFIWEMFTRVLADVPRQSPYNKGAMSWQLMTILPALLDRPAFAPLAAYLGGGDE 120 Query: 116 ---TDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEA-------QAWQ 165 D ++ +L+QL K ADLFDQYLVYRPDW+A+WE G + G Q WQ Sbjct: 121 QDPAGDPEQVRLWQLCQKVADLFDQYLVYRPDWIARWEEGEGLVGTESQDLAGVSGQDWQ 180 Query: 166 APLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQ 225 LW+ LV T L +HRANLY+ FI L+ P LP RVF+ GISALPP Y++ Sbjct: 181 PELWRELVARTLALSPSGYHRANLYEEFIHELQRTRDLPGKLPQRVFVFGISALPPRYVE 240 Query: 226 ALQALGKH--IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 AL ALG +E+HL TNPCRYYWGD+ D LA+L + + Sbjct: 241 ALLALGSRPEVEVHLFVTNPCRYYWGDLLDRKTLARLENKLK------------------ 282 Query: 284 GQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDN------LLHN 337 + D Q NPLLAS GKLGRDY++ L +LE SQ ++AFVD+ + LL Sbjct: 283 -PGTDLDTLQGPANPLLASMGKLGRDYLHQLMELEVSQ-IEAFVDIDEVDASGNVRLLRA 340 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 IQ D+LEL +R + S +K P+DP D S+ H CH P RE+EVLHDRLLA+ Sbjct: 341 IQKDVLELGSRGEGQ---FDLDSSYHKSPIDPADGSLQIHACHGPMRELEVLHDRLLALF 397 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 E DP+LTP+D++VM+ D++SY P+IQAVFG A +P+A+SDR A Q P+L++F++L Sbjct: 398 ERDPSLTPKDVVVMMPDVNSYGPYIQAVFG---ARGQIPFAVSDRAASQESPLLQSFLAL 454 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L LP +R + ++LA+L+VP + RF++ ++ LR WV E+GIRWG+DD ELP Sbjct: 455 LHLPSARLGAGELLAILEVPAVLRRFELDDDEFNQLRVWVQETGIRWGLDDAYPERFELP 514 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQ----------------GEWQSVLPYDESSGLIAELV 561 ++W FGL RMLLG+AM + G S+LPY E G + Sbjct: 515 RMSGNSWLFGLRRMLLGFAMGDGEPVAGMSFCADHGAGQQGAVASILPYAEIEGQQGLAL 574 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 G LA + L + L +E+ L EW D+L+ F+L D E E + LI Q Sbjct: 575 GKLAWFVDSLAEFLPRLQREQSLPEWSACLLDLLDRFYLADEEEERLLQLIRSQLADWQT 634 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 + A++ + LL+D L + L + R SQRFLAG VN CTLMPMRSIPFK VCLLGMN Sbjct: 635 QLGEARFDQPITADLLQDYLGKVLGESRSSQRFLAGQVNFCTLMPMRSIPFKQVCLLGMN 694 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 DGVYPR LAP+GFDLM+ +RGDRSRRDDDRYLFLEAL+SAQQ LYISY G S QDNS+ Sbjct: 695 DGVYPRTLAPMGFDLMAVASRRGDRSRRDDDRYLFLEALLSAQQGLYISYQGFSAQDNSD 754 Query: 742 RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE--- 798 + PSVL+ ELIDY+ Q L GDE L+ + S R+ HL H P+ + P Sbjct: 755 KVPSVLLAELIDYVRQGFVLAGDERLDDEASGERLLKHLVVEHPLTPYSRSYFYPEAESR 814 Query: 799 RQSYAREWLPAASQAGKAH----SEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQ 854 +YA +WLPA + A E P + + + L L RF+ P + F RL+ Sbjct: 815 LFTYAADWLPALNPVRGAANFQSGELPLPPEWGREQGLELAELLRFYRQPAKYFLNRRLK 874 Query: 855 VNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE 914 V F ++ I D+EPF L+GL YQ+ LL++ + + D+ R + G LP G FG Sbjct: 875 VWFELNEANIEDSEPFELDGLQHYQLKALLLDSHLAEGDSAVRRERLQLTGLLPQGWFGS 934 Query: 915 IFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSV 974 + + EM +LA+R+ Q++EID++ Q+ GW+ Q LL +P + Sbjct: 935 LLLDDLDAEMGKLAERLRPWVSEKQAVEIDISLAQGQLQGWIDT-QKGRLLVVKPGSFNG 993 Query: 975 AQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAP 1034 + W++HL S G++ LF K R P L+A++A L+ L+ + +GM P Sbjct: 994 KDLLLGWIQHLCLSLSCAPGDTLLFDAK-QSLRLPKLSADEARPKLAALVALWAQGMKRP 1052 Query: 1035 LLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLW 1094 L P + WLK + A L + G MV GEG D++ R + Sbjct: 1053 LPFFPNTAWDWLKAMEKEPDKP--------DAADKAALTRFNGGWMVTGEGQDVYVARCF 1104 Query: 1095 RQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 +L + + ++ L PL + + Sbjct: 1105 PELDEAVLSQLQALAREHLPPLLKTLE 1131 >UniRef50_A5GC93 DNA helicase/exodeoxyribonuclease V, gamma subunit n=7 Tax=Geobacter RepID=A5GC93_GEOUR Length = 1091 Score = 841 bits (2172), Expect = 0.0, Method: Composition-based stats. Identities = 388/1134 (34%), Positives = 589/1134 (51%), Gaps = 75/1134 (6%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L++Y SNR++ L + +VE+ L PF PE I+VQS GM +WL M L+++FG+ AN + Sbjct: 3 LKIYTSNRMETLVDQLAGVVEK-PLPSPFTPETIVVQSKGMQRWLAMELARRFGVWANGE 61 Query: 62 FPLPASFIWDMFVRVLPEI---PKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 FP P + + +F V+P++ P+ S+F+ ++W+LM LLP L F L YL DD Sbjct: 62 FPFPNAVVETLFRAVIPDLAETPQVSSFHPDVLTWRLMELLPSCLGGPGFEPLAGYLADD 121 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQ 178 D K QL+ K AD FDQY +YRP+ L WE G WQ LW+ LV Sbjct: 122 GDGLKRLQLAEKIADTFDQYTIYRPELLLSWEEGAEGG-------WQGLLWRELVRNATD 174 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 HRA L F + T LP R+ + GI LPP +++ L + + EI+L Sbjct: 175 -----RHRAALLAEFRRRINRPDTAAAELPRRISLIGIPTLPPFHMEVLSGIARQTEINL 229 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 NPCR YWG I LA+L R G + GNP Sbjct: 230 FLLNPCREYWGKIVSERELARLERR-------------------GLDEDPLHGYFETGNP 270 Query: 299 LLASWGKLGRDYIY-LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 LLAS G++GRD+ L+ D ++ D F ++ LLH IQ++IL+L +R AG Sbjct: 271 LLASMGRIGRDFFDSLIGDCGDAEFSDTFTEIRGSGLLHAIQANILDLRDRGAAGD---- 326 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + ++ D ++ H CHS RE+EVL+D++L++ + DPTL+PRDI+VM DI++ Sbjct: 327 ------REVIEATDDTLRIHSCHSAMREIEVLYDQILSLFDNDPTLSPRDILVMTPDIEA 380 Query: 418 YSPFIQAVFGS-APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y+P+I AVFG+ ++ +PY+I+DR R+ E +++L L SRF +VL +L+ Sbjct: 381 YAPYISAVFGTPEQPEQRIPYSIADRSLRREGETAEVLLAILQLCGSRFAITEVLDILEA 440 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 + RF +T++ L + QW+ + IRWGID +PA +++W+ GL R++LGYA Sbjct: 441 APVCRRFGLTDKDLETVHQWLTATNIRWGIDAMERTGHGVPAFSENSWQAGLDRLILGYA 500 Query: 537 MESAQG-EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 M + +LPYD G A L+G L + LA+ R +EEW V R +L Sbjct: 501 MAGEDRHFFGEILPYDHLEGSDALLLGRFLEFCETLFSRVQALARPRQIEEWTAVLRSLL 560 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 F D + E + + + + + A +G V + ++R L ++L E+ FL Sbjct: 561 GTFIKADGDDERDVATLLKVIERLDECRAHANFGGDVGIEIVRAWLGEKLGSEQRGFGFL 620 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 G V C ++PMRSIPF+V+ LLGMNDGV+PR+ P GFDL++ P+RGDRS+RD+DRYL Sbjct: 621 TGGVTFCAMLPMRSIPFRVIALLGMNDGVFPRRNRPHGFDLIAASPRRGDRSQRDEDRYL 680 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 FLEAL+SA+++ ISY+G+SI+DNSE PSVLV EL+DYI + G+EA Sbjct: 681 FLEALLSARERFSISYVGQSIKDNSELPPSVLVSELLDYIAKGFTRAGEEADET-----A 735 Query: 776 VKAHLTCLHTRMPFDPQNYQP--GERQSYAREW----LPAASQAGKAHSEFVQPLPFTLP 829 ++ H PF ++P G SY+RE L A + + +PLP Sbjct: 736 AVRGISVRHPLQPFSRDYFRPNDGRLFSYSRENLHGVLAAIAPPAVPATFLSRPLPPAEE 795 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV 889 V L L F+A+P + F + RL + D ++EPF L+ L +Y + Q+++ AL+ Sbjct: 796 TLVTLYDLAEFFANPCKHFLRRRLGIYLEQRDESFAESEPFSLDHLGKYMLGQEIVAALL 855 Query: 890 EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR--QPGQSMEIDLAC 947 + + R+ G+LP G G I ++T A++V A P +EIDL Sbjct: 856 AGESLDNHRAVARSRGELPPGECGTITYDTLASAASDFAEQVAAATVGAPLPPLEIDLEF 915 Query: 948 NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVY--CASGGNGESRLFLRKDGE 1005 ++ G + ++ P+GL+ +R + L +++W+EH+ A G + L D Sbjct: 916 KESRLVGRIERIWPEGLVHYRYAKLKAKDRLRIWIEHICLTSAAPTGYPRTASLLASDVT 975 Query: 1006 WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQ 1065 P++ +L L QL+ YR GMSAPL P+S + + D + Sbjct: 976 VAIAPVS--DSLALLEQLLTIYRRGMSAPLPFFPKSALEYARKANDPKK---------AA 1024 Query: 1066 KARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRF 1119 KA + + G+ GE +D +YQR + P + S+ PL Sbjct: 1025 KALGDARKKWHGSEDYPGEKEDPYYQRCFGNEEPL-DGEFMALSRMVYDPLLAH 1077 >UniRef50_C4L7B2 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L7B2_TOLAT Length = 1130 Score = 837 bits (2162), Expect = 0.0, Method: Composition-based stats. Identities = 470/1144 (41%), Positives = 655/1144 (57%), Gaps = 41/1144 (3%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M RVYHSN+LDVL++L+ +++ L E ILVQS GMAQWL+ L+Q G+AANI Sbjct: 1 MFRVYHSNQLDVLKSLLAHLIQLSPLQPALAAETILVQSPGMAQWLKQALAQDLGVAANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FPLP+SFIW MF +VLPE+P+E+ + K +M W+LM LLPQ ++ F L YL +D D Sbjct: 61 TFPLPSSFIWQMFHQVLPEVPQENPYTKPAMLWRLMQLLPQCMDDVLFAPLAGYLAEDHD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 R+ +QL + ADLFDQYLVYRPDW+ WE+G E Q WQ LW+ LV + Sbjct: 121 GRRCYQLCQRIADLFDQYLVYRPDWIVDWESGGAQG--AETQLWQPVLWRKLVA-LTEQQ 177 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 HR NL+ FI TL++ LP R+F+ GIS+LPP YL+AL ALG+H E+HLL Sbjct: 178 ASHLHRVNLFSSFINTLKAGK-PKAVLPQRLFVFGISSLPPHYLEALMALGEHCEVHLLL 236 Query: 241 TNPCRYYWGDIKDPAYLAKLLTR----QRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 TNPCRYYWGD+++ + + + QRR ++ E E Q SD + G Sbjct: 237 TNPCRYYWGDLQEENQINQRVLNKLLAQRREQWQQAEQHKPLLPETDWQQLFSDEGEQQG 296 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 NPLL S GK GRDY+ LL+++ + E+DAF ++ D+L L + ++ Sbjct: 297 NPLLVSLGKQGRDYLSLLAEIS-AAEIDAFAEINGDSL----------LHLLQQDLLELQ 345 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + +R KRP+ D S+ H CHSP REVEVLHD+LL DPTLTP++++VMVADI+ Sbjct: 346 DGTRLRPKRPISASDRSLVLHGCHSPLREVEVLHDQLLQRFAADPTLTPKEVVVMVADIN 405 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y P++QAVFG+A +RY+P++ISDR A Q +P+L++F++LLSLPD R + ++L LL V Sbjct: 406 RYGPYVQAVFGNATGERYIPFSISDRSATQENPLLQSFLTLLSLPDQRCTATELLELLAV 465 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P L RF + E L LR+W ESG+RWG++ + ELP +HTW FGL RMLLG+A Sbjct: 466 PALLKRFGLAEADLTTLRRWAMESGVRWGLESGDGERFELPPRERHTWSFGLERMLLGFA 525 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 + + V PY G A +G LA + Q+ R L RP+ EW + +L Sbjct: 526 -SGNETLFADVAPYTAIEGQNAVKLGQLARFIAQVMALRDELETARPITEWQNLVDRLLL 584 Query: 597 AFFLP----DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 F+LP + + AA+ LI Q+ QY + +PL++ D L L+ R Q Sbjct: 585 DFYLPQEQLEEDDAAALNLIRSTLQSWQQRLSQMQYQEPLPLTVFHDHLQSELNAVRGGQ 644 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 +FLAG VN CTLMPMR+IPF++VCLLGMNDG+YPR + PLGFDLM+ +P++GDRSRR+DD Sbjct: 645 QFLAGRVNFCTLMPMRAIPFRLVCLLGMNDGLYPRSMPPLGFDLMADQPRKGDRSRREDD 704 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 RYLFLEAL++AQQ+LYISY+ S DN + PSVLV EL++Y ++ LP DE E Sbjct: 705 RYLFLEALLAAQQQLYISYVAHSAIDNRDLMPSVLVTELVEYCQRAFLLPEDEEKAETEQ 764 Query: 773 EARVKAHLTCLHTRMPFDPQNYQP------GERQSYAREWLPAASQAGKA---HSEFVQP 823 E + HL H +P+D + + P + SYA EWLPA + G+A + P Sbjct: 765 ETALHQHLLTGHPLVPYDRRYFSPTVPPATADLFSYAAEWLPALTPTGQAGFFDARLSLP 824 Query: 824 LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 + L RF+ +PV FF+ RL+V F ++ + +TEPF L+ L +YQ+ ++ Sbjct: 825 EELQGKPEIELADWLRFFRNPVAGFFRRRLRVQFVEREAALEETEPFWLDKLQQYQLRER 884 Query: 884 LLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC-RQPGQSME 942 LL D R A G LP G FG + + + + LA + Q Sbjct: 885 LLRYQRLDVDQAVWQARLLAEGMLPDGEFGRLALQADAKNLAPLAAALQTWPLATAQRET 944 Query: 943 IDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRK 1002 L G Q+ G + +V L+R R S L + + +WLEHL A+G + L Sbjct: 945 FHLDFAGWQLLGSVGEVYAGQLVRHRVSKLKASWLVAIWLEHLALSAAGKLTQPTRLLAL 1004 Query: 1003 D----GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAML 1058 D GEW L+A+ A L + + EGM PL + + WL+ L Sbjct: 1005 DNGKLGEWLLAVLSADAAREQLLLWWQAFTEGMQRPLCLPVNTAWQWLEKATT--ESGCL 1062 Query: 1059 DDDSTLQKARTKFLQAYEGNM-MVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLF 1117 DD+ +AR + Y G+ V GEG D + R + +L+ E E I E + + LLPL Sbjct: 1063 GDDAQQLQAREAAQKTYTGDGTFVSGEGQDTYLARCFPELSSEYWEEIEEWAVQLLLPLR 1122 Query: 1118 RFNQ 1121 + Q Sbjct: 1123 QHLQ 1126 >UniRef50_B8CMV5 Exodeoxyribonuclease V, RecC subunit n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CMV5_SHEPW Length = 1224 Score = 830 bits (2143), Expect = 0.0, Method: Composition-based stats. Identities = 390/1222 (31%), Positives = 616/1222 (50%), Gaps = 131/1222 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEP-EMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML + SN+++ L ++ + P E ILVQS GM+ WL++ ++++ IAA Sbjct: 1 MLYLVQSNQMEALSQILATELTTPLPGAPLLLPEHILVQSPGMSTWLRLEIARQNNIAAA 60 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 ++FPLP+SFIW + +L ++PKE+AF K +++WKLM LLP L++++DF L +YL + + Sbjct: 61 LEFPLPSSFIWQLCHTLLEDVPKENAFTKAAITWKLMELLPSLIDQDDFAPLANYLNNGN 120 Query: 120 DK---------------------------RKLFQLSSKAADLFDQYLVYRPDWLAQWETG 152 KL+QL + AD+FDQYLVYRPDW+A WE Sbjct: 121 QGHGENDLQSQYLEIDTSETISASHPQSPLKLYQLCGQIADIFDQYLVYRPDWIAAWEAN 180 Query: 153 HLV-----EGLGEAQAWQAPLWKALVE-YTHQLGQPRWHRANLYQRFIETLESATTCPPG 206 + L AQAWQ LW+AL++ + L + ++HRANL+Q + L+ T Sbjct: 181 EPTLPPKGDKLAPAQAWQPILWRALIQFNANTLHKSQYHRANLHQALFDKLDDPNTSMTS 240 Query: 207 LPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRR 266 LP R+F+ GIS++ P L L L K I++ +L +PC++YWGDI DP A++ + Sbjct: 241 LPRRLFVFGISSMAPQTLDVLHHLAKRIDVIMLSLSPCQHYWGDIVDPRLRARMALQYAN 300 Query: 267 HSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE---L 323 + + + +VGNPLLA+ GK+GR+ + L+ +L L Sbjct: 301 KQKLE---------------VEWEDKLEVGNPLLANNGKMGRELLDLMLELPEEHTAFNL 345 Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS-DNKRPLDPLDSSITFHVCHSP 382 D + D D +LH +Q DIL+L R + D +R L D SIT CHSP Sbjct: 346 DCYQDPGIDCMLHGVQHDILQLSTRGQCLGPDASLYLTVDGRRMLQQDDHSITIRSCHSP 405 Query: 383 QREVEVLHDRLLAMLEE-----DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 REVE LHD LL ML + L P+DI++M+ D+ +Y+P+I AVF + Y+PY Sbjct: 406 LREVETLHDHLLEMLSKQTDSKGQPLAPKDIVIMMPDVAAYAPYIDAVFSAKQGSHYIPY 465 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 AI+DR A Q P++ +F+ LL++ SRF D++ +L+VP + RF++ ++ L L++W+ Sbjct: 466 AIADRGAVQESPLIASFLHLLNINQSRFGLTDIIGILEVPSVLRRFELDDDSLTILKRWL 525 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 ++G+RWG D + E +LPA Q+ W G+ R++LGY+ +Q L + G Sbjct: 526 EQAGVRWGRDGASRAEHQLPAFEQNAWALGIKRLILGYSFADNSPLYQQTLAVNGIEGQT 585 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 A+ +G L + L+ LAQ L E + +L AF+ D + + + I Sbjct: 586 AQALGKLLDFIEALDDVHAALAQNCSLTERIEQLEQLLAAFYSVDDDEQVQLQEIRDAIV 645 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 + E + + +P+ +L++ RL + R+ QR+LAG +N CTLMPMRSIPFK+VCL Sbjct: 646 TLAEELTESGHTTPLPIEVLQNWFNSRLSESRVGQRYLAGSINFCTLMPMRSIPFKIVCL 705 Query: 678 LGMNDGVYPRQLAPLGFDLMSQ-KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 LGMNDGVYPR P+GFDL++Q P++GDRSRR DDRYLFLEA++SA+Q+LYISYIG S Sbjct: 706 LGMNDGVYPRVQHPVGFDLVAQMDPRKGDRSRRLDDRYLFLEAILSARQQLYISYIGNSE 765 Query: 737 QDNSERFPSVLVQELIDYIGQSHYL---------------PGDEALNCDESEARVKAHLT 781 +D+SER PS+LV EL++Y ++ + A+ D+ E + L Sbjct: 766 RDDSERIPSMLVSELVEYCQLAYLPAKLALESKASADNYSKQEAAVFVDKIEQAISTQLI 825 Query: 782 CLHTRMPFDPQNYQPGE-------RQSYAREWLPAASQAGKAHSEFVQP----------- 823 C PFD + Y +QSY+ +W P A Sbjct: 826 CKQPLQPFDERLYHSAHISDSFPLQQSYSAQWCPVAVSQTTTDIADKSSNRFINLDTCLL 885 Query: 824 ----LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 E + L L RF+ +P + +F L+V+ + EPF L L RYQ Sbjct: 886 NTAQSDSEEVEEIELSALIRFFRNPAQYYFNRTLKVDLSINVRADDNDEPFSLNALERYQ 945 Query: 880 INQQLLNALVE---QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ 936 + L+ +E + L R +A G++P F ++ ++ L R + + Sbjct: 946 LQSILIEHAIENQTESPDGELLERLKAQGNIPLKPFDDLLLSQYLHDITPLIGRSLYLKG 1005 Query: 937 P-GQSMEIDLACN-----------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 QS+EI + +++ G + + GL+ +RP + ++++L H Sbjct: 1006 ESSQSIEIAIDIALVDGSKPVTDQSIKLVGRIDDLSAKGLVNYRPGTANGRDLIRVYLRH 1065 Query: 985 LVYCASGGNGESRL-------FLRKDGEWR-FPPLAAEQALHYLSQLIEGYREGMSAPLL 1036 L CA G+ + +L G + F P+ A QA LS + +++G PL+ Sbjct: 1066 LCLCAMQGSTDITRLNQPINSYLLDIGHFHVFAPITAAQAKSQLSLWLTLFKQGQVQPLM 1125 Query: 1037 VLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ 1096 +P + A+++ + + + + GEG + +QRL+R Sbjct: 1126 FMPRTALAYVEA------------EGDHTQKLREAQPKWLDEQSQLGEGMEPHFQRLYRF 1173 Query: 1097 LTPETMEAIVEQSQRFLLPLFR 1118 + + + +Q L PL Sbjct: 1174 PEDFSEQHFGDTAQTLLSPLIS 1195 >UniRef50_A3QEU7 Exodeoxyribonuclease V, gamma subunit n=4 Tax=Shewanella RepID=A3QEU7_SHELP Length = 1192 Score = 822 bits (2123), Expect = 0.0, Method: Composition-based stats. Identities = 397/1202 (33%), Positives = 605/1202 (50%), Gaps = 111/1202 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERE-RLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML + SNR++ L L+ ++ P E ILVQS GM+ WL++ ++++ +AA Sbjct: 1 MLYLVQSNRMEALAELLANELQTPLPGQSPLSNEQILVQSPGMSTWLRLAIAKQNQVAAA 60 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD- 118 ++FPLP+SFIW + ++LP++PKE+AF K +M+WKLM LLP LL +E F L +YL DD Sbjct: 61 LEFPLPSSFIWQLCHQLLPDVPKENAFTKPAMTWKLMELLPGLLSQEVFAPLANYLKDDA 120 Query: 119 -------SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL-----VEGLGEAQAWQA 166 KLFQL S+ AD+FDQYLVYRPDW+ WE G L Q WQ+ Sbjct: 121 ILTDSAAPHSLKLFQLCSQIADIFDQYLVYRPDWILAWEQGEDRLPPKERPLDANQQWQS 180 Query: 167 PLWKALVEYTHQ-LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQ 225 LW+ L+ Y H L Q R+HRANL+Q + L LP R+F+ GIS++ P L+ Sbjct: 181 LLWRELIHYNHHTLNQSRYHRANLHQALFDALSDPLCDLSKLPPRLFVFGISSMAPQTLE 240 Query: 226 ALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQ 285 L L K I++ +L +PC++YWGDI DP A++ + + Sbjct: 241 VLYFLAKRIDVVMLNLSPCQHYWGDIVDPKLRARMALQY---------------GDKQQL 285 Query: 286 LFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE---LDAFVDVTPDNLLHNIQSDI 342 + + + +VGNPLLA+ GK+GR+ + L+ +L + + + D ++LLH +Q DI Sbjct: 286 AIDWESKLEVGNPLLANNGKMGRELLDLILELPENDTNFNFECYQDPGSNSLLHGVQQDI 345 Query: 343 LELENRAVAGVNIEEFS-RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 LEL R E + +R L D S+T CHSP RE+E LHD LL L + Sbjct: 346 LELCTRGETLGPDAELYLTTKGRRVLKIDDDSLTLRSCHSPLRELETLHDHLLEQLSQSD 405 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 L P+DI+VM+ D+ +Y+P+I AVF S D ++PYAI+DR A Q P++ +F+ LL L Sbjct: 406 GLAPKDIVVMMPDVAAYAPYIDAVFASKRGDHFIPYAIADRGAAQESPLINSFLHLLGLN 465 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 SRF D+L +L+VP + RFD+ ++ L +R+W+ ++G+RWG D + + +LPA Sbjct: 466 KSRFALTDILGILEVPAVMRRFDLDDDDLLLIRRWLEQAGVRWGRDQHSRQAQQLPAFEH 525 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 ++W FG+ R++LGY+ + L G A+ +G L + + ++ + L + Sbjct: 526 NSWAFGIKRLILGYSFSDEAPIYHDSLALPGVEGQSAQALGKLLNFIEAIDEFNLALGEH 585 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 PL + + ++ F+ E + + Q + E QY + L ++++ Sbjct: 586 CPLSVRITQLQTLVETFYDCVDEELSQKQELLQAITRLSEELTATQYQSELELEVMQNWF 645 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK- 700 + L + R+ QR+LAG VN CTLMPMRSIPF +VCLLGMNDGVYPR P+GFDL++Q+ Sbjct: 646 TRHLTESRVGQRYLAGSVNFCTLMPMRSIPFMLVCLLGMNDGVYPRVQHPVGFDLVAQEG 705 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG---- 756 P++GDRSRR DDRYLFLEAL+SA+++LYISYIG S +DNSER PS+LV ELI+Y Sbjct: 706 PRKGDRSRRLDDRYLFLEALLSAREQLYISYIGHSERDNSERIPSMLVSELIEYCQLCYL 765 Query: 757 --------QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE---------- 798 + + + E + L PFD + Y E Sbjct: 766 PENCAHLLKGSNADDTSTADIAKIELAILDQLIITMPLQPFDERLYLADESEGAECEGAK 825 Query: 799 ------RQSYAREWLPAASQAGKAHSEFVQPLPFTLP-----------------ETVPLE 835 RQSY+ +W P A + Q E + L Sbjct: 826 SEPRRLRQSYSEQWCPRALTEQDKQHDGEQGAKPASAGHFIEAPLSLVADEDKGEPLELS 885 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV---EQD 892 L RF+ +P + FF L+++ + EPF L LSRYQ+ L+ V ++ Sbjct: 886 ALIRFYRNPAQYFFNRTLKLDLNLSIQADENDEPFALNPLSRYQLQSTLIEDAVKSGDER 945 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP-GQSMEIDL---ACN 948 + L R R +G LP F ++ + +++ L R + + + +IDL Sbjct: 946 PSSELLERLRLSGQLPLAPFDDLLLKQYQHDIRALVGRTLYLQGESSHTQDIDLLLSDSA 1005 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCAS-----------GGNGESR 997 + G + V GL+ +RP + ++++L HL AS + Sbjct: 1006 ATALVGRIDGVSAKGLVNYRPGTANARDLIRVYLRHLCLNASVSDNSDVERHEATPWQRH 1065 Query: 998 LFLRKDGEWR-FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDA 1056 +L G + F P+ EQAL+ LS E Y +G S PL +P + A+++ Sbjct: 1066 SYLLDIGHFHAFAPITPEQALNQLSLWAEHYHQGQSQPLPFMPRTAFAYVEA-------- 1117 Query: 1057 MLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPL 1116 + + + GEG + YQRL+ + + L P+ Sbjct: 1118 ----EGEHIEKLIAAQPQWLDEQSNLGEGQEAHYQRLFTFPDDFSEAGFGTIASTLLSPM 1173 Query: 1117 FR 1118 Sbjct: 1174 LS 1175 >UniRef50_Q080D9 Exodeoxyribonuclease V, gamma subunit n=6 Tax=Shewanella RepID=Q080D9_SHEFN Length = 1270 Score = 821 bits (2121), Expect = 0.0, Method: Composition-based stats. Identities = 395/1262 (31%), Positives = 620/1262 (49%), Gaps = 171/1262 (13%) Query: 1 MLRVYHSNRLDVLEALMEFIVE-RERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML + SN+++VL + ++ R E +LVQS GM+ WL++ +++ GIAA Sbjct: 1 MLTLIQSNQMEVLSEQLAKLLAIRLDNVSLLASEHVLVQSPGMSTWLRLEIAKHNGIAAA 60 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 + FPLP+SF W + +LP++PK++AF K +M+WKLM LLP LL+ DF+ L+ YL+ Sbjct: 61 LSFPLPSSFTWQLCHDLLPDVPKDNAFTKAAMTWKLMDLLPSLLDNPDFSPLKQYLSPQV 120 Query: 120 DK---------------------------------------------RKLFQLSSKAADL 134 D KLFQL + AD+ Sbjct: 121 DTTTDIAATDILDTDVDANTNTDIETETNIHTANSHAISQLNQSHDAIKLFQLCGRIADI 180 Query: 135 FDQYLVYRPDWLAQWETGHLVE------GLGEAQAWQAPLWKALVEY-THQLGQPRWHRA 187 FDQYLVYRP+W+ WE + L E Q WQ LW+ L++Y H L +HRA Sbjct: 181 FDQYLVYRPEWILAWEQNQPLSSIDNRLALDENQQWQPILWRTLIDYNQHHLHASHYHRA 240 Query: 188 NLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYY 247 NL+ I TL + T LP+R+++ GIS++PP L L L I++ +L +PC++Y Sbjct: 241 NLHADLIATLANPDTDLSMLPARLYVFGISSMPPQTLDVLYHLASRIDLIMLSLSPCQHY 300 Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG 307 WGDI +P A++ + D+ + + + +VGNP+LA+ G++G Sbjct: 301 WGDIIEPKTRARMALQYANKKQLDQ---------------DWEDKLEVGNPILANNGQMG 345 Query: 308 RDYIYLLSDLESSQEL---DAFVDVTPDNLLHNIQSDILELENR-AVAGVNIEEFSRSDN 363 R+ + LL L D +V+ P+NLLH +Q DIL++E G N + Sbjct: 346 RELLDLLLSLPPEHTDFGYDCYVEPEPNNLLHGVQYDILQMETLGQPLGPNSSVYQDIHA 405 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 +R L P D SIT CHS REVE LHD LL +L + L+P+DI++M+ D+ +Y+P+I Sbjct: 406 RRTLLPSDDSITLRSCHSALREVETLHDHLLELLSNNSDLSPKDIVIMMPDVAAYAPYID 465 Query: 424 AVFGSAPA-----------DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 AVFG+A + D Y+PYAI+DR A Q P++ +F+SLL++ SRF D++ Sbjct: 466 AVFGTANSQYFADKNPQKGDYYIPYAIADRGAAQESPLINSFLSLLNINQSRFGLTDIIG 525 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 +L+VP + RF + ++ L +R+W++++ +RWG + +L + Q++W FG+ R++ Sbjct: 526 ILEVPAILRRFQLDDDELSLIRRWLDDANVRWGRSEQTRSQLGVQPFTQNSWAFGIKRLI 585 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 LGYA ++ L G ++ +G L + L ++ + A + E L + Sbjct: 586 LGYAFNDDADIYRETLMVQGIEGQSSQALGKLLNFLETIDTYFNLFANDYSTAERLEQLQ 645 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 +L + + + I + E A + V + +L+ QRL + R+ Q Sbjct: 646 QLLADCYDTTDDEREQIQAIRDALVTLDTELESAGHQGQVDIEVLKQWFNQRLTESRVGQ 705 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK-PKRGDRSRRDD 711 R+LAG VN CTLMPMRSIPFKVVCLLGMNDGVYPR P+GFDLM+ PK+GDRSRR D Sbjct: 706 RYLAGSVNFCTLMPMRSIPFKVVCLLGMNDGVYPRVQHPVGFDLMAHFGPKKGDRSRRLD 765 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG-------QSHYLPGD 764 DRYLFLEAL+SA+++LYISYIG S +DN+ER S+LV EL++Y L Sbjct: 766 DRYLFLEALLSAREQLYISYIGHSERDNAERIASMLVSELVEYCQLSYLPQSLQQQLEQQ 825 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER---------QSYAREWL-PAASQAG 814 +N D+++ V A L PFD + ++ S+ +W P A+ Sbjct: 826 AEINLDDADKAVLAQLIQAQPLQPFDAKLFRETPLSAHSVNKLQHSFNAQWCPPPANATI 885 Query: 815 KAHSEFVQPLPFTLPE------------------TVPLETLQRFWAHPVRAFFQMRLQVN 856 H F Q LP + + + L L RF+ +P + FF L+V+ Sbjct: 886 NNHIFFEQALPLSAEQADEVFAHTHINSEGIKVVELELSALIRFYRNPAQFFFNRSLKVD 945 Query: 857 FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE---QDDAERLFRRFRAAGDLPYGAFG 913 + + EPF L L RY + ++L+ +E L + + +G+LP F Sbjct: 946 LSLDIQADDNDEPFSLNALERYLLQSRMLDNAIEHQLDSPDFELLSKLKTSGELPMAPFD 1005 Query: 914 EIFWETQCQEMQQLADRVIAC--RQPGQSMEIDLACN----------------------- 948 ++ +++ L +RV +Q ++ +DL + Sbjct: 1006 DLLINQYLRDISPLINRVQFLQDQQAMHTLNVDLNFDLPMQDFPAYALSVQGLPEQADTT 1065 Query: 949 -----GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL----- 998 V + G + + P GL+ +RP ++++L HL A + S + Sbjct: 1066 HSSIVRVNLVGRIDDILPKGLVNYRPGTAHGRDFIRVYLRHLCINAMANSSTSGMGKNQF 1125 Query: 999 -FLRKDGEWR-FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDA 1056 +L G + F P+ AEQA L + I G+ +G + PL +P++ A+++T Sbjct: 1126 SYLLDIGHFHAFAPITAEQAQAQLMRFISGFIQGQTQPLCFMPKTAFAYVET-------- 1177 Query: 1057 MLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPL 1116 D ++ K Q ++ GEG D QRL+ + + L P+ Sbjct: 1178 ----DGDHEEKLLKAQQKWDDGQNQFGEGHDPHNQRLFHFPEDFSEARFGALAIHLLQPM 1233 Query: 1117 FR 1118 Sbjct: 1234 LS 1235 >UniRef50_A6W0B0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Marinomonas RepID=A6W0B0_MARMS Length = 1131 Score = 818 bits (2112), Expect = 0.0, Method: Composition-based stats. Identities = 427/1154 (37%), Positives = 635/1154 (55%), Gaps = 59/1154 (5%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M ++Y SNRL+ L L+ I+ ++PF+ E ILVQ+ GMAQWL+M L++ IAA + Sbjct: 1 MFQLYTSNRLEDLAVLLAKILAVSPPENPFDDEFILVQNPGMAQWLKMFLAESHSIAAGL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FPLP++F+W F + L +IP +S FNK + W+LM LL L +F L YL +D Sbjct: 61 VFPLPSTFVWQTFAQSLDDIPAQSEFNKPFLVWRLMRLLDSRLGDPEFQALSWYLEEDDT 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEG----LGEAQAWQAPLWKALVEYT 176 + + FQL S AD++DQYLVYRPDW+ WE G + + E Q WQA LW+ LV Sbjct: 121 QIRRFQLCSSIADIYDQYLVYRPDWIKSWEGGEAQDPKLTAIFEQQPWQAILWRDLVADV 180 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG--KHI 234 Q G +HR NL + + +S+ P G+P R+FI G+S+LPP L++L+ L I Sbjct: 181 SQRGTSLYHRGNLIEALHDKTQSSA-RPVGVPERIFIFGVSSLPPNTLESLRVLAASGWI 239 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 ++HL NPCR+YWGD+ D YL + + R + ++D Sbjct: 240 DVHLFLQNPCRFYWGDVVDKHYLGREIKR-----------------QTLKPGLSTDTLHL 282 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQEL--DAFVDVTPDNLLHNIQSDILELENRAVAG 352 NPLLASWG+LGRDYI L ++ ++ + + + LL IQ D+L LEN Sbjct: 283 DANPLLASWGRLGRDYIAQLQEMADNELVVFEDYRTEQSTGLLQWIQQDVLTLENHGSQQ 342 Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 + + + P+ D SI H+CHSP REVEVLHD+LL M E DP+LTP+DIIVM+ Sbjct: 343 ERDAKIRDASYRHPIAADDQSIRVHLCHSPLREVEVLHDQLLQMFESDPSLTPKDIIVML 402 Query: 413 ADIDSYSPFIQAVF----GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 D+++YSPF++AVF GSA +++P+A+ D+ +P+++A++ LL L +SRF Sbjct: 403 PDVNTYSPFVKAVFGSVKGSAQGRKHIPFALIDQSGGMENPIVDAYLYLLGLGESRFTLS 462 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 +++++L+VP + ARF++T + L +RQW E GIRWG+D ++ +LP HTW G+ Sbjct: 463 ELISVLEVPAVLARFELTADELERIRQWSTEVGIRWGLDGKTAQQHDLPMQESHTWLNGV 522 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 RMLLGYAM W+ L Y + GL A + G LA L+ +N + L + +EW+ Sbjct: 523 RRMLLGYAM-GHDHIWEGTLSYGDVEGLEASVAGKLAEFLVAINDAQAKLMESLAPKEWI 581 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 + FFL D + L+ +Q A+ + A + + +LR L+ L + Sbjct: 582 STLYYLAERFFLVDEDDA-FPALLSKQLDALTLQWQQAHFDAPLDQQVLRQLLSPLLQES 640 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 + QRFLAG VN CTLMPMRS+PFKV+C+LG+N+G YPR +AP+GFDLM + + GDRSR Sbjct: 641 QGGQRFLAGRVNFCTLMPMRSVPFKVICVLGLNEGDYPRSVAPMGFDLMVGQYRSGDRSR 700 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 R+DD+YLFLEAL+SA+ YISY+GRSIQDNSE+ PS+LV EL++YIGQS GD+AL Sbjct: 701 REDDKYLFLEALMSARDCFYISYVGRSIQDNSEKNPSILVSELLEYIGQSCVFEGDQALT 760 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQP-------------GERQSYAREWLPAASQAGK 815 D+++ + L H PF+ Y SY +WLPA Sbjct: 761 PDDAQKALLEKLILEHPLQPFNAAYYFQPQGSSHESTDQFDKRLYSYDEQWLPALLSVPV 820 Query: 816 AHSEFVQPLPFTLPET---VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL 872 L + + L+ L RF HP R F Q RL+ ++ E + EPF L Sbjct: 821 DEEAQAFSPLEGLEQPRIDLALDELSRFIGHPTRYFTQRRLKAYLSLQEEEEKEDEPFAL 880 Query: 873 EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI 932 +GL+ YQ+ + LL A+++ D ++ R G LPYGA G + + + +QL + Sbjct: 881 DGLAGYQLREGLLQAMLKG-DEDQFVERLSLMGALPYGALGRLSLQQSRGQCRQLLSVLQ 939 Query: 933 AC-RQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASG 991 + + +E++LA + + WL L +R LS Q MQ+W+EHL CA G Sbjct: 940 GYALEECEPIEVNLAMGSIVLQAWLDLPTATTRLSYRIGDLSAHQKMQMWIEHLALCAQG 999 Query: 992 GNGESRLF-LRKDGEW---RFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLK 1047 E L L K G+ F + A YL+ ++ ++G+ P+ + +S AW K Sbjct: 1000 TPKEHHLINLTKTGKLLQHSFIIIPPNDAQDYLNTMLALLQQGLCQPIALPAKSADAWCK 1059 Query: 1048 TCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVE 1107 + ++ + D D ++A + + R E DD ++QR + L + V Sbjct: 1060 SYCSSK--TLEDADIAWEQALKLYQD--NSSAFTRSEVDDAYWQRYFPDLNRQKA-QFVS 1114 Query: 1108 QSQRFLLPLFRFNQ 1121 ++ LP+ R + Sbjct: 1115 LCEQIWLPMHRHLE 1128 >UniRef50_B8E565 Exodeoxyribonuclease V, gamma subunit n=8 Tax=Shewanella RepID=B8E565_SHEB2 Length = 1274 Score = 815 bits (2104), Expect = 0.0, Method: Composition-based stats. Identities = 401/1254 (31%), Positives = 626/1254 (49%), Gaps = 165/1254 (13%) Query: 1 MLRVYHSNRLDVLEALMEFIVERE-RLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML++ SN+++VL A + + + E ILVQS GM+ WL++ ++++ GIAA Sbjct: 1 MLKLIQSNQMEVLCAHLAAYLTQPLAFARLLSNEHILVQSPGMSTWLRLEIAKQNGIAAA 60 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD- 118 ++FPLP+SF W + +LP++PK++AF K +M+WKLM LLP++L+ + F LRHYL + Sbjct: 61 LEFPLPSSFTWQLCHDLLPDVPKDNAFTKAAMTWKLMQLLPRMLQDDAFGPLRHYLGNTL 120 Query: 119 ---------------------SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGH---- 153 +D KL+QL + AD+FDQYLVYRPDW+ WE Sbjct: 121 DNRSTTNSADTSEHLNTSDMTADDIKLYQLCGRIADIFDQYLVYRPDWILAWEQNEHPES 180 Query: 154 LVEGLGEAQAWQAPLWKALVE-YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVF 212 L + L E Q WQ LW+AL+ +L Q +HRANL+ I L + T LP R+F Sbjct: 181 LTKPLNEDQRWQPILWRALIAFNRDELNQSHYHRANLHSDLIAALNNPDTSLAQLPQRLF 240 Query: 213 ICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDR 272 + GIS++ P L+ L L I++ +L +PC++YWGDI DP A++ + Sbjct: 241 VFGISSMAPQTLEVLYHLAGRIDVIVLGLSPCQHYWGDIVDPRNRARMAVQYAGKRQLA- 299 Query: 273 ELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ---ELDAFVDV 329 + + +VGNPLLA+ GK+GR+ + +L +L + D + + Sbjct: 300 --------------ELWEDKLEVGNPLLANNGKMGRELLDMLLELPAEHCDFGDDVYCEP 345 Query: 330 TPD--------NLLHNIQSDILELENRAVAGVNIEEFSRS-DNKRPLDPLDSSITFHVCH 380 D ++LH +Q DILE++ E ++ +N+R L D SI CH Sbjct: 346 CDDPNDPHSHASMLHGVQYDILEMQTLDRVLGPDAELYQNVENRRLLKRDDQSIRVKSCH 405 Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 SP REVE LHD LL +L LTP+DI+VM+ D+ +Y+P+I AVF + Y+PYAI+ Sbjct: 406 SPLREVETLHDHLLELLSNHADLTPKDIVVMMPDVAAYAPYIDAVFSAKQGLHYIPYAIA 465 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 DR A Q P++ +F++LL + SRF D+L++L+VP + RF + ++ L+ +R+W++E+ Sbjct: 466 DRGAAQESPLINSFLNLLGINQSRFGLTDILSILEVPAILRRFQLDDDELQLIRRWLDEA 525 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 G+RWG D+ + + +PA Q++W FG+ R++LGYA+ +Q L G A+ Sbjct: 526 GVRWGRDEQSRLKQGVPAFEQNSWAFGIKRLILGYALSDDAPLYQDHLIVTGIEGQSAQA 585 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 +G L + + L+ + LA + L ++L+AF+ D + + I A+ Sbjct: 586 LGKLLNFIEVLDETAQILALPQVGALRLAELTELLDAFYDTDEDEREQLQEIRDAIAALE 645 Query: 621 AEGLGAQY-------------------------GDAVPLSLLRDELAQRLDQERISQRFL 655 E L A G ++ + +L+ QRL + R+ QR+L Sbjct: 646 QELLSAGKPLDTSPLAFSLDISPLAPLAQQSISGLSLSIEVLQQWFNQRLTESRVGQRYL 705 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP-KRGDRSRRDDDRY 714 AG VN CTLMPMRSIPFKVVCLLGMNDGVYPR P+GFDLM+ ++GDRSRR DDRY Sbjct: 706 AGSVNFCTLMPMRSIPFKVVCLLGMNDGVYPRVQHPVGFDLMAHFGARKGDRSRRLDDRY 765 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP--------GDEA 766 LFLEAL+SA+++LYISYIGRS +DNSER S+LV ELI+Y + Sbjct: 766 LFLEALLSAREQLYISYIGRSERDNSERIASMLVSELIEYCQLCYLPETLLAQSQKASSP 825 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPGER----------------------QSYAR 804 ++ +++E + + PFDP+ YQ + QSY++ Sbjct: 826 IDPEDAEKALYNAIVSHQPLQPFDPKLYQAAVKSDDENSSNIDGSSISQHKSGIGQSYSQ 885 Query: 805 EWLPAASQAGKAH--------------SEFVQPLPFTLPETVP-----------LETLQR 839 +W P + A H ++ +P T + + L R Sbjct: 886 QWCPPNADAAGTHAGRFIGAQTRIMLEADEQDSMPDTEAQPASVREQQQSKQVDVSALIR 945 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE---R 896 F+ +P + FF L+V+ + EPF L L RY + QLL+ + Q E Sbjct: 946 FFRNPAQYFFNRTLKVDLSLNIQADDNDEPFSLNALERYMLQAQLLDDAIGQGLTEPDIE 1005 Query: 897 LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQS------MEIDLAC--- 947 L +R +A+G LP F ++ +++ L R + + S + DL Sbjct: 1006 LIKRLKASGSLPMQPFDDLLLRQYQHDIKPLIGRTLFLKGEQTSSHADIKLVFDLPITAG 1065 Query: 948 --NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGE 1005 V + G + + P GL+ +RP ++L+L HL A G S L G Sbjct: 1066 KSQQVLLQGRIDDISPKGLVNYRPGSAHGRDVLRLYLRHLCLMAMGHTHASYLLDM--GH 1123 Query: 1006 WR-FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTL 1064 + P+ AE+A L+ L+ + +G PL +P + A++ + Sbjct: 1124 FHAIAPITAERAHALLADLLVLFYQGQQYPLCFMPRTSLAYVSC------------EGEH 1171 Query: 1065 QKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 + + L + GEG++ YQRL+ + ++ ++R P+ Sbjct: 1172 DERLQQALPEWLDEQSQLGEGNEPHYQRLFSFPRDFSEDSFGALAERIYRPMVS 1225 >UniRef50_A1AQY6 DNA helicase/exodeoxyribonuclease V, gamma subunit n=2 Tax=Desulfuromonadales RepID=A1AQY6_PELPD Length = 1061 Score = 812 bits (2097), Expect = 0.0, Method: Composition-based stats. Identities = 367/1121 (32%), Positives = 544/1121 (48%), Gaps = 93/1121 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L + SNR++ L + +++ L PF PE+++VQS GM +WL M L++ FG+ AN Sbjct: 3 LTICTSNRMENLVEALCDVLKT-PLSSPFTPEILVVQSKGMQRWLAMKLAETFGVWANCT 61 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 +P P +W++F++ PE+P S F+ + M+W++M LLP L R++FT L HYL D D Sbjct: 62 YPFPNKVVWELFMKAFPELPDTSRFSPEVMTWRIMGLLPAFLGRQEFTPLNHYLDGDGDG 121 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 K FQL+ K AD FDQY ++RP+ L WE G + WQ LW+ L Sbjct: 122 LKKFQLAGKIADTFDQYTLFRPNMLLDWEGGKGGD-------WQELLWRELAT-----AD 169 Query: 182 PRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 HR + Q FI+ L LP R+ + GIS LP +L + KH + L Sbjct: 170 NGQHRGRIKQDFIKLLAQGHAEKESLPERIMVFGISYLPSYHLDIFTEIAKHTTVSLFLL 229 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA 301 +PCR YWGDI +++ +R + GNPLLA Sbjct: 230 SPCRQYWGDIVSAKQMSRRPPEER-------------------------AYLEEGNPLLA 264 Query: 302 SWGKLGRDYIYLLSDLES--SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 S GKL RD+ ++ + S + ++D ++D LL IQSDIL L Sbjct: 265 SLGKLARDFSNMVVEAGSIATDDVDLYLDPGEGLLLEAIQSDILNLR----------GTE 314 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 D+KR + P D S+ H CHSP RE+EVLHD LL +LE++ LTPRDIIVM DI++YS Sbjct: 315 GGDSKRRISPQDRSVQIHACHSPMREIEVLHDNLLFLLEQEKGLTPRDIIVMTPDIETYS 374 Query: 420 PFIQAVFGSAPAD-RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 P+I VFG + +P++I+DR + + + LL LP SR V +L Sbjct: 375 PYISMVFGGCQDPLKKIPFSIADRTLAKEGQIASVILKLLELPGSRLSVTRVFDILQSAP 434 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 ++ RFD+ + L +R W+ ++ IRWG D+ + L LP +++WR GL R++LGYAM Sbjct: 435 VSRRFDLDIQELETVRSWIEDTRIRWGADESHRSSLGLPHYRENSWRAGLDRLMLGYAMP 494 Query: 539 SA-QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + +LPYDE G + +G LA + ++ R LA +R L EW ML+ Sbjct: 495 EEGDFLFHGILPYDEMEGDATQALGKLAEFVARIERLARDLAAKRTLTEWRDAITTMLSD 554 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 F D + + I Q++ G A + + V L ++R LA RL +E FL G Sbjct: 555 FAAADDDLAHELASINGVVQSLEDLGAKAGFSETVDLVVIRSWLASRLGEEEKGLGFLTG 614 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V C ++PMRSIPF+VVCL+GMND +PRQ P GFDL+++ P+ GDRS RD+DRYLFL Sbjct: 615 GVTFCAMLPMRSIPFRVVCLIGMNDAAFPRQSRPPGFDLIARNPQPGDRSLRDEDRYLFL 674 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 E L+SA+ Y+SY+G+S++DNS PSVLV E +D IG E ++ Sbjct: 675 ECLLSARTHFYLSYVGQSVKDNSAIPPSVLVSEFLDAIGAGFT----------SGEMTLE 724 Query: 778 AHLTCLHTRMPFDPQNYQPGE-RQSYARE----WLPAASQAGKAHSEFVQPLPFTLPE-- 830 L H F + SY+ E L A ++G+ PL E Sbjct: 725 QRLVTSHRLQAFSRSYFDATSGLFSYSAENCAALLDATQRSGEPALFITHPLKAAPEEMR 784 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE 890 V L L RF+A+P + + RL++ + + D EPF +EGL Y INQ+LL ++ Sbjct: 785 EVTLAQLVRFYANPAKYLLENRLKIRLEEVSTPLDDREPFAVEGLEAYGINQELLEKRLQ 844 Query: 891 QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME---IDLAC 947 L+ R G LP GE + E+ L ++ +E Sbjct: 845 GGSVHGLYATTRCRGILPPAQHGETVFADALAEVDNLVKKIGERTGGQPRLEAFFFHETI 904 Query: 948 NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYC--ASGGNGESRLFLRKDGE 1005 +++G L + + + +R + L ++ W+EHL+ A G L + KDG Sbjct: 905 GDFKLSGSLDGIWKERKISYRCAKLKAKDEIRGWIEHLLLNAFAPEGYPRESLVIMKDGS 964 Query: 1006 WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQ 1065 F P+ E L L++ Y +G+ PL P S + + Sbjct: 965 TGFGPV--EHPTEQLGALLDCYWQGLHLPLRFFPASSLEFASSG---------------- 1006 Query: 1066 KARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIV 1106 + +E M GE D ++ + Q + Sbjct: 1007 -LLKNARKKWESGYMHTGEEADPHFRLCFEQDADPLNKEFE 1046 >UniRef50_Q3IJ13 Exonuclease V, gamma chain with recB and recD: 5' and 3' nuclease, ATPase, recombinase, helicase n=3 Tax=Alteromonadales RepID=Q3IJ13_PSEHT Length = 1099 Score = 811 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 391/1134 (34%), Positives = 606/1134 (53%), Gaps = 55/1134 (4%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML + SNR++ L+A +++ L PF+ E++LVQS GM+QWL++ LS+ G+AA + Sbjct: 1 MLNIIQSNRMEALQAQFHQLLKTNPLASPFDKEVVLVQSPGMSQWLKIGLSENLGVAAQV 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DFPLP+SFIW ++ ++LP +PKESAFNK +++WKL +LP ++ + L+ YL D D Sbjct: 61 DFPLPSSFIWQLYQQLLPNVPKESAFNKPNLAWKLFAILPSCIDEPLYLPLKTYLEGDID 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETG--HLVEGLGEAQAWQAPLWKALVEYTHQ 178 +K F L K AD++DQYL+YRP W+A W++G L + WQ LW+ +V+ + + Sbjct: 121 GQKTFALCEKIADVYDQYLMYRPHWIATWDSGIDELDDVDVTIAPWQPDLWRRIVQLSLE 180 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 LGQ ++HRAN+ + + LE+ LP R+ + GISA+ L+ AL + E+ L Sbjct: 181 LGQSQFHRANMQGQLLAALETMDN--SLLPQRISLFGISAIASSQLEVFTALSEKTEVFL 238 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 F NP +YWGDI D AK+ + + +++ Q + +GNP Sbjct: 239 FFFNPSEHYWGDIIDEKTAAKISAKYAKMP--------LVEAQQKKQTNPDEEYYFIGNP 290 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA-GVNIEE 357 LL+SWGKLGRDY L L+ ++ +D F+DV D LL IQS+I +L + + N E Sbjct: 291 LLSSWGKLGRDYFEQLVQLD-ARWIDGFIDVFDDTLLGQIQSEIYQLAFKGESLTDNKEW 349 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 F + K P+ D+SIT CH+P REVE LHD LL + ++P LTP+DIIVM+ D+ + Sbjct: 350 FINDEGKLPISATDTSITLSDCHTPLREVERLHDYLLNLFNQNPALTPKDIIVMMPDVGT 409 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 YSP+I+AVFG A R++PYA++D Q +PVL +F SL +LP SRF D+L LL V Sbjct: 410 YSPYIEAVFGGAQGSRFIPYALADLAIEQENPVLSSFASLANLPFSRFGVSDILDLLQVT 469 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 +A +F + ++ W+ G++WGI+ D+ +LPA +TW+ GL R+LLG AM Sbjct: 470 QIAEKFGLEAHEYEQIQYWLERVGVKWGINADHKSSFDLPAIDLNTWQHGLNRLLLGIAM 529 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 Q + + DE G+ + + L + L ++ L + L V ++L+A Sbjct: 530 RDEQCPFNGIYSADEVEGMALDTLNKLVHFIDVLQSFKEQLTPDDTLTNKAHVLSELLSA 589 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 + +++ + +++ + + Y AV ++ + Q + ++ + QRFL G Sbjct: 590 IYESESDDSWDLLVLQNVLEELQKHHNNGDYSKAVSQRIVSYLIKQGIQEKGVGQRFLVG 649 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS-QKPKRGDRSRRDDDRYLF 716 VN CTLMPMR++PFKVVC+LG+ND YPR + P+GFDL+ K ++GDRSR+ DDRYLF Sbjct: 650 QVNFCTLMPMRAVPFKVVCMLGLNDADYPRNVQPIGFDLVPYSKKQKGDRSRKLDDRYLF 709 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 LEAL+SA+ LY+SYIGRS DN R PS LV EL++YIG+S L D+SE + Sbjct: 710 LEALLSARDNLYMSYIGRSCFDNQPRMPSTLVSELLEYIGRSFAL-------SDDSEKTL 762 Query: 777 KAHLTCLHTRMPFDPQNYQPGERQ-------SYAREWLPAASQAGKAHSEFVQPLPFTLP 829 L PF+ Y E+ SY WLP+ + V L T P Sbjct: 763 PECLISQQHLQPFNSHYYLANEQANTVLSNHSYNPIWLPS----ESITPQVVSALNATPP 818 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV 889 E + L+ R + +F+Q L + + + D EPF L+ L RY ++L A + Sbjct: 819 EQLELDVFIRSVCNAQESFYQQSLGLRLPQFNEVVKDEEPFSLDALRRYFYLDEILEANI 878 Query: 890 EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC--RQPGQSMEIDLAC 947 + + G+LP G + +E+ + LA +V +E+ L Sbjct: 879 NELPLS--TEQILQRGELPQANVGSLIFESMQHRVDALAGQVKEQIKGGKSDPIEVALEL 936 Query: 948 NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWR 1007 +I GWL + + +R + + ++ ++ HLV + E+ L L D + Sbjct: 937 ENTKIEGWLNHIYLQKQVFYRSASIKAKDLIKGFIYHLVAQSMEQQVET-LILGLDKQVT 995 Query: 1008 FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKA 1067 F P++ A L E Y+ + P+ P SG ++K+ D + KA Sbjct: 996 FAPISKTDADALLVDWFELYKALRNEPVAFFPVSGYEYVKSGGD------------IAKA 1043 Query: 1068 RTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 +KF Y G RGEG++ + + + L + ++ S + L PLF + Sbjct: 1044 MSKFSPQYIG----RGEGENPYIRLTVQSLND-CQDEFIQWSDKLLAPLFAHAK 1092 >UniRef50_Q1LST9 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Baumannia cicadellinicola str. Hc (Homalodisca coagulata) RepID=Q1LST9_BAUCH Length = 1098 Score = 810 bits (2091), Expect = 0.0, Method: Composition-based stats. Identities = 493/1132 (43%), Positives = 705/1132 (62%), Gaps = 51/1132 (4%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +Y SN+LDV+ +++ ++ +L + +PE+ILVQ+ + QWLQ+ L+ GIAANI Sbjct: 1 MFTIYQSNKLDVITSILISLISERKLRETLQPEIILVQNHNITQWLQVELAMSLGIAANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 F P FI+ + +LPE+ E F++ +SWK+ +LP ++ + +L+R YL +D D Sbjct: 61 RFSTPTIFIYKLLSSILPEMNLEMFFSRSLISWKIRLILPHFYDQPNCSLIRQYLHNDVD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 KRK F LS K ADLF QY +YRPDWL W+ G V LG Q WQA LW+AL+E Sbjct: 121 KRKQFHLSEKIADLFYQYFLYRPDWLEIWQQGKRVASLGPDQNWQALLWRALIEENMLS- 179 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 NLYQ FI+ ++ T P GLP R+FI +S+LPP+YLQ LQAL HI+IH + Sbjct: 180 ------TNLYQLFIQAMKHMTVRPSGLPDRIFIYAVSSLPPIYLQVLQALSNHIDIHFML 233 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NP R R + S+ + + ++ + NPLL Sbjct: 234 VNPYR---------------FNRINKQSYTQQPIYSTNTNQKSI------------NPLL 266 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 WGK G+D I LLS+L++ Q++DAFV+ L +S + L+ + + Sbjct: 267 EYWGKQGKDTISLLSELKNIQKIDAFVE------LSQEKSLLSLLQLDILEDNIVCHLHN 320 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + KR L D S++ +VCHSPQRE+EVLHD +LAM+ ++ +L P +IIVMV DI+ Y P Sbjct: 321 AKVKRLLQHNDHSLSINVCHSPQREIEVLHDAILAMIAQEQSLLPCEIIVMVTDINLYIP 380 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 I+AVFG+A DRYLP+ I DR + ++PVL F+ LL LP SR E+VL+LLD VLA Sbjct: 381 AIKAVFGNATTDRYLPFTIYDRTVKHTNPVLSVFLRLLKLPFSRLTIEEVLSLLDTSVLA 440 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 F I++ L LR+W+ ESGIRWG+DDD R+L LP T QHTW FGL RMLLGYA++S+ Sbjct: 441 KHFSISQIDLTILRKWIVESGIRWGLDDDTQRDLMLPTTSQHTWEFGLNRMLLGYAIDSS 500 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 G WQ +LPYDESSG AEL+G+LA L+M+L WR+ L + R L EWL DM+ FF+ Sbjct: 501 NGIWQGILPYDESSGKRAELIGNLAELIMRLRRWRKNLKKPRKLTEWLHCASDMIKDFFV 560 Query: 601 P--DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 + E E A+ +I QWQ I+ G+ A Y V ++ L DEL RL Q+ ++Q F++ Sbjct: 561 TNVNKEVETALVIILDQWQQILQCGIKANYDQPVSIARLYDELNMRLQQKHLNQSFISSN 620 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 + CT+MP SIPFKV+CLLGMNDG+YP + PL FDLM Q+P+RGD +R D+DRY+FLE Sbjct: 621 IIFCTIMPTSSIPFKVICLLGMNDGIYPHSILPLNFDLMKQQPRRGDYNRYDEDRYIFLE 680 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 L+SAQQKLYIS+IG IQDN+ R PS+L+ EL +YI Q+ YL GDE L+ ++ Sbjct: 681 LLLSAQQKLYISFIGYFIQDNTLRSPSILISELTNYITQNFYLSGDEQLDEHTCNLHIRK 740 Query: 779 HLTCLHTRMPFDPQNYQPGERQ-SYAREWLPAASQAGKAHSEFVQ------PLPFTLPET 831 HL H+RMPF P+N+ PG S+A+EWL AA + ++++ + Sbjct: 741 HLWQWHSRMPFAPENFIPGSINQSFAKEWLLAAKASFRSNNTQNRFFMNKSLATKKQENM 800 Query: 832 VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ 891 + L L++F+ HPVR +FQ RL + E +I + EPFI++G+S Y+I +++LNAL+E Sbjct: 801 LLLANLKKFYQHPVRTWFQQRLDLWLYNEPQDISENEPFIVKGISHYKIKEKILNALIEG 860 Query: 892 DDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC-RQPGQSMEIDLACNGV 950 + + ++++ RAAG L YGAFG+++W QC +M L D++ + +I L + Sbjct: 861 KNLDVIYQQVRAAGLLAYGAFGKLYWTKQCSKMIYLVDQIRTYILPEQHTEKIQLNIDNT 920 Query: 951 QITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPP 1010 + GWL ++Q +GL+RW P LS+ G+QLW+EHL YCA GGNG+SR+F W FP Sbjct: 921 VLIGWLSKIQCNGLVRWYPHNLSMKHGLQLWIEHLAYCAIGGNGQSRMFGTNSQ-WCFPV 979 Query: 1011 LAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTK 1070 L++++A YL LI+GY +GMS PLL+L SGGAWL C++ + + + + AR Sbjct: 980 LSSDEAKKYLLTLIKGYWQGMSEPLLLLNRSGGAWLTHCFNKKTRMINWEKDCQRTARNY 1039 Query: 1071 FLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS 1122 ++A+EGN + GE D++ Q+L QL + AI++ + + LP +FN S Sbjct: 1040 MIKAWEGNHLFPGESSDLYLQKLILQLNENYIIAIIKAVECYFLPPLKFNIS 1091 >UniRef50_Q2LTC9 Exodeoxyribonuclease V gamma chain n=2 Tax=Bacteria RepID=Q2LTC9_SYNAS Length = 1113 Score = 807 bits (2083), Expect = 0.0, Method: Composition-based stats. Identities = 381/1143 (33%), Positives = 571/1143 (49%), Gaps = 71/1143 (6%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L + SNR++VL + ++ L P PE+I+VQS GM +W+ M L+ GI AN+ Sbjct: 4 LNIIASNRMEVLAEKLADVLAG-PLSSPLTPEIIVVQSRGMERWVSMQLAAFHGICANVR 62 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 FP P I D+F VLP E FN + +W++M+LL R F L YL DDS Sbjct: 63 FPFPRRMIQDIFHAVLPGWEAEQDFNPELAAWRIMSLLTVASSRPGFEPLAAYLHDDSQG 122 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 K FQLS + A LFDQYL++RP+ + WE G+ +WQA LW+ VE Sbjct: 123 LKRFQLSRQIARLFDQYLIFRPEMILNWEKRISD---GDEYSWQADLWRLFVEEGK---- 175 Query: 182 PRWHRANLYQRFIE-TLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 H A L + + LP R+ I GIS LPP YL A+ +E++ Sbjct: 176 -IVHPAVLRLSLQDVMIRRGNQLSACLPERISIFGISYLPPFYLDIFLAVSSFMEVNFFL 234 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NP R +W DI+ +++ + + +L S+ + GN LL Sbjct: 235 LNPSREFWFDIRSSREISREVKLVKGS---------VEKGMENEELSRSELYLEEGNSLL 285 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 AS G LGR++ L + +E + +V+ +LLH IQSDIL L Sbjct: 286 ASLGTLGREFWSFLGECSGREE-EYYVEPGETSLLHAIQSDILNLREGGGEA-------D 337 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 +D + + + S+ H CHSP REVEVLHD LL +LE DP+L P DI+VM +I++Y+P Sbjct: 338 ADGREVMFSEERSLQIHACHSPMREVEVLHDSLLDLLEADPSLQPHDIVVMTPEIETYAP 397 Query: 421 FIQAVFGSAPADR-------YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 FI AVF + D +PY I DR PVL + +L LP RF + +VL+L Sbjct: 398 FITAVFETVDEDAPGLVDQPKIPYHIVDRATISGRPVLGGLLKILDLPLGRFAAGEVLSL 457 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 L+V + RF +TE + + +WV +SGIRWGID+ + LP ++W++GL RMLL Sbjct: 458 LEVAAIRNRFGLTEADIDQVSRWVADSGIRWGIDERSRLREGLPEIATNSWQWGLKRMLL 517 Query: 534 GYAMESAQ-GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 GYA+ + + ++P + + G A L+G LA +L + L+Q+R L +W + Sbjct: 518 GYALPARNNELFSGIMPCETAEGSEARLLGILAEFTERLFLTAESLSQDRTLSDWGSLLD 577 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 D+ + FFL D ++E + + Q + + + + L+++R L R Sbjct: 578 DISDRFFLGDEDSEPDIRNLRQLASDLKNLQEKTGFPEKISLAIVRSFLQDRFQATGADG 637 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 FL+ V C+L+PMRSIPF+V+CL+GMN+G YPR+ FDLM++ P+RGDRSRR+DD Sbjct: 638 GFLSRGVTFCSLLPMRSIPFRVICLMGMNNGDYPRRPQTPSFDLMARHPRRGDRSRRNDD 697 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 RYLFLEAL+SA+ LYISY+G+S++DNS PSV+V EL+DY+ + L Sbjct: 698 RYLFLEALLSARDTLYISYVGQSMEDNSRIPPSVVVSELLDYVRRGFVLKDCN------- 750 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPG--ERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE 830 + L H F P + SY+ E AA+ K S + +P E Sbjct: 751 ---IDELLITYHPLQAFSPVCFTEESCRLFSYSEENRKAANTLLKRSS--LTSIPGAEAE 805 Query: 831 TV----------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQI 880 + + L F+ HP R F Q RL V D + + E F +EGL RY I Sbjct: 806 RLPEDPAMATQATIRDLIAFFRHPARFFLQRRLAVFLGEADIVLEENEHFDVEGLDRYGI 865 Query: 881 NQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI--ACRQPG 938 Q L+ +E E ++ A G LP+GA G+ ++ +++ + Sbjct: 866 EQLLMEKEIETGHMEEVYPVLAAQGLLPHGAVGQSRFDALKRDICHFVRSYKHILHSENI 925 Query: 939 QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN---GE 995 +IDL G +++G L + GLL +R + L ++LW+ HL+ A+ G Sbjct: 926 PPRDIDLEVAGFRLSGRLEGLGSRGLLHYRYATLKGKDHLKLWIMHLLLHATDGPDGGDR 985 Query: 996 SRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQND 1055 L L K+G WR+ + ++A +L +LI YREG+ PL PE+ A+ Sbjct: 986 ESLLLGKNGLWRYSAI--DEARCHLEKLISLYREGLCRPLHFFPETSWAYAVKILRNGEL 1043 Query: 1056 AMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLP 1115 + ++S +A+EG+ RGEG D + + + +P+ + E S P Sbjct: 1044 SEEAEESA----WDAARKAWEGDDFQRGEGVDHYNRLCFGDFSPQDV-EFQELSLNVYRP 1098 Query: 1116 LFR 1118 L Sbjct: 1099 LLE 1101 >UniRef50_Q65UM5 RecC protein n=9 Tax=Gammaproteobacteria RepID=Q65UM5_MANSM Length = 1167 Score = 805 bits (2080), Expect = 0.0, Method: Composition-based stats. Identities = 432/1173 (36%), Positives = 649/1173 (55%), Gaps = 92/1173 (7%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 VYHSNRLDV + ++ +++ DDPF+ E+ILVQS GMAQWLQ+ +++K GIAAN+ Sbjct: 22 FTVYHSNRLDVQKDILIELMQLLPPDDPFQTEIILVQSPGMAQWLQLKIAEKKGIAANLK 81 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS-- 119 FP+PASFIW ++ VL ++ +++ FNK +M+W+LM L+PQ L F L +YL + Sbjct: 82 FPMPASFIWQQYINVLEDVSQQTQFNKDAMTWRLMQLIPQFLSEPCFQALENYLKNSPYS 141 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL------------------VEGLGEA 161 +++KL+QL+ K ADLFDQYLVYRP+W+ WE + + Sbjct: 142 EQQKLYQLARKVADLFDQYLVYRPNWIHAWENNQPESIEQAIGTYQKDDNPELITQIKRD 201 Query: 162 QAWQAPLWKALVEYT-HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 WQ LW+AL++ G HRANL+Q FI+ L SA P LP R+FI GISALP Sbjct: 202 IKWQGILWRALIDEVQRGAGYKVRHRANLHQAFIDKLRSAK--PENLPQRIFIFGISALP 259 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD- 279 YL+ +A+ ++ +IHL F NP R YWGDI D +L KL TRQR +E+ L Sbjct: 260 QSYLETFEAMSRYCDIHLFFNNPSREYWGDIVDDRFLQKLQTRQRFDHYENNHTALLSSA 319 Query: 280 -----SENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL-----ESSQELDAFVDV 329 + + + + VGNPLLA WGKLGRD+ YLL+DL E ++E+ AFVD+ Sbjct: 320 TLTNMQQENYEFSPDNEKLLVGNPLLAGWGKLGRDFFYLLTDLMTRAEEHNREIIAFVDL 379 Query: 330 TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVL 389 LL +Q IL+L AV +N + D+S+T H CHS REVEVL Sbjct: 380 DDKTLLSQVQGHILDLIPMAVKKLNKPQ------------EDNSLTIHACHSVMREVEVL 427 Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP-----------ADRYLPYA 438 HD LL++ E D LTP+DI+VMVADID Y+P+IQAVFG RY+P++ Sbjct: 428 HDYLLSLFELDKNLTPKDIVVMVADIDKYAPYIQAVFGQYQKDLQTNQFYQADKRYIPFS 487 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 ISD + +S ++ +F+ LL+L +S+F +E+VLA LD+P + RF I E L +R+WV Sbjct: 488 ISDNKLTESDVLIASFLMLLNLKESQFSAEEVLAYLDIPAIRMRFQIELEDLETIREWVK 547 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 SGIR+G++ L+ + W+ GL RMLLGYAM + G WQ L +D+S GL Sbjct: 548 NSGIRFGLEKRTDNSLK----NYNAWQSGLERMLLGYAMRAENGIWQDSLGFDDSHGLQG 603 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 +L G LA+ + +L W++ L EEW ++++ FFL + ++ A+ +++ Q Sbjct: 604 KLAGLLAAFIERLYQWQQFLRNPHSYEEWGQALLELVDHFFLENEQSLEAILYLKEIIQQ 663 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + + + + + ++ + +A++L+ + S +FL G V+ CTL+PMR+IPFK VCLL Sbjct: 664 LHEQLDEVNFTSKLEIDVIAEVMAEQLNDKNTSLKFLVGKVSFCTLLPMRAIPFKAVCLL 723 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 GMNDG YPRQ P FDLM ++GDR RRDDDRYLFLEAL++A+ Y+SY+G+SI D Sbjct: 724 GMNDGEYPRQQTPNSFDLMQYHRQKGDRFRRDDDRYLFLEALLAAENYFYVSYVGQSIID 783 Query: 739 NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE 798 N +R PSVLV +L+DY+ ++ N DE +++ L H+ F P N+ Sbjct: 784 NQQREPSVLVSQLLDYLAENL-------ANNDEEIEQIRTSLVQYHSMTIFSPDNFSAMH 836 Query: 799 RQSYAREWLPAASQAGKAHSEFVQPLPFTLPE--TVPLETLQRFWAHPVRAFFQMRLQVN 856 R SYA+EWLP ++ +F Q + + E + + L +F HPV+ FF+ RL V Sbjct: 837 R-SYAKEWLPLVNRNQYPVPDFTQQISGEIDEVREIDILQLVQFVQHPVKFFFEKRLGVY 895 Query: 857 FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 F+ D +IP+TE F L+ L + I +L+ D+ + F R + G LPYG FG+I+ Sbjct: 896 FQQTDEQIPETENFTLDNLDNFLIKDELI--RFADDETDNYFERLKLEGILPYGHFGDIY 953 Query: 917 WETQCQEMQQLADRVIACR---QPGQSMEIDLACNG--VQITGWLPQVQPD--GLLRWRP 969 E +L +++ A Q +EI L V +TG L + ++WR Sbjct: 954 KRRLQNEAAELKNKISAYLSQEPAHQFVEITLDMGEQSVLLTGHLDHLYQPFAQRVKWRV 1013 Query: 970 SLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYRE 1029 + ++ WL +L+ + N L+ K+G F L AL L ++ Y + Sbjct: 1014 GEVKDKHIIENWLYYLLQLCTTDNVNPPLYYGKNGCIGFKTLEKSTALSILKLYVKAYLQ 1073 Query: 1030 GMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIW 1089 G+ +V +LK+C + + A ++ + E +DI+ Sbjct: 1074 GLKQVQIVPTYKIDDYLKSC-------QPETEFDTLSAFNNLRDLFKSSNNYTNEKEDIY 1126 Query: 1090 YQRLWRQLTPETMEA-----IVEQSQRFLLPLF 1117 + R+++Q T + I + ++ + + Sbjct: 1127 WTRVFQQATELNSDKEKLMQIQQTTRDWFGLML 1159 >UniRef50_A1S6U9 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Shewanella amazonensis SB2B RepID=A1S6U9_SHEAM Length = 1163 Score = 799 bits (2063), Expect = 0.0, Method: Composition-based stats. Identities = 398/1151 (34%), Positives = 605/1151 (52%), Gaps = 72/1151 (6%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M + SN ++ L + + + + E ILVQS GMA WL++ ++ GIAA + Sbjct: 1 MFTLVQSNHMERLAKRLADELNQAS-GNVLATEQILVQSPGMATWLRLEIAAHNGIAAAL 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FPLP++FIW + +LP +PKE+AF K +M+WKLM LLP+L+E+ F LR YL+ DS Sbjct: 60 SFPLPSNFIWSLCYALLPGVPKENAFTKDAMTWKLMALLPRLIEKPHFEPLRDYLSSDS- 118 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV-----------EGLGEAQAWQAPLW 169 KLFQL+S+ AD+FDQYLVYRPDW+ WE G L + WQ LW Sbjct: 119 PLKLFQLASRVADIFDQYLVYRPDWIVTWELGENDLSPTGSPLTQGAALPDNCLWQPLLW 178 Query: 170 KALVEYT-HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQ 228 +ALV+Y +LGQ WHRANL+Q + L + T LP R+F+ GIS+LPP L+ L Sbjct: 179 RALVQYNRDELGQSHWHRANLHQALVAALSNPNTDISALPRRLFVFGISSLPPQTLEVLY 238 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 ALG I + +L +PCR YWGDI D AKL + + + + Sbjct: 239 ALGSRIPVTMLSLSPCRQYWGDIVDSKLRAKLALKYKA---------------HKMLPEH 283 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ---ELDAFVDVTPDNLLHNIQSDILEL 345 + +VGNPLLA+ GK+GR+ + L+ L + + +LL +Q+DIL++ Sbjct: 284 WEETLEVGNPLLAANGKMGRELLDLVLSLPPEHFTLDDSGYETNDDSHLLGRLQNDILDM 343 Query: 346 ENR-AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT-L 403 E A ++ + ++ K LD D+S+ CHSP REVE LHD LL +L + L Sbjct: 344 EVAGAPLCADLARYQSNEGKFLLDEQDNSLVLRSCHSPLREVETLHDHLLGLLSDRQGRL 403 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 + ++I+VM+ D+ +Y+PFI AVF S + Y+PYAI+DR A + P++ F++LL + S Sbjct: 404 SAKNIVVMLPDVAAYAPFIDAVFASRRGEHYIPYAIADRGAVEESPLIHGFLTLLDINHS 463 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 RF ++L LL++P + A+F + EE L L W++E+G+RWG D + +L LPA +H+ Sbjct: 464 RFGLSEILGLLEIPAVMAKFKLDEEELSRLGNWLSEAGVRWGRDAQSREKLGLPAFDKHS 523 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 W FG+ R+LLG+++ + LP+ G A+ VG L + L+ + A Sbjct: 524 WAFGIRRLLLGFSLGDEGDFYHGTLPFAGVEGQQAQCVGKLLDFIEHLDEFAARFAAADS 583 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW----QAIIAEGLGAQYGDAVPLSLLRD 639 L + + F P E + + LI + +A+ + + L ++ Sbjct: 584 LTLKFAELSRLTDTLFAPLPEYQEELNLIRETLCDTQKALQSSASSESSLSDISLEVICQ 643 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 L +L R+ QRFLAG VN CTLMPMRSIPFKVVCLLGMN+G+YPR P+GFDLM++ Sbjct: 644 TLGSKLTDARVGQRFLAGSVNFCTLMPMRSIPFKVVCLLGMNEGIYPRVQHPVGFDLMAK 703 Query: 700 KP-KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 P +RGDRSRR DDRYLFLEAL+SA+++LYIS+IGRS +D+SER PS+LV EL+D Sbjct: 704 TPARRGDRSRRLDDRYLFLEALLSAREQLYISFIGRSERDDSERLPSMLVSELLDCCE-- 761 Query: 759 HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY--QPGERQSYAREWLPAASQAGKA 816 L+ S+ ++ L PFD + Y S+A +W P ++ K Sbjct: 762 --------LSAYVSQGKLVNRLVKQQPLQPFDHRLYLTNQDITASFAAQWCPQETRPPKP 813 Query: 817 -HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 + + + + L +L RF+ P R F Q RL+++ + D+EPF ++ L Sbjct: 814 FIDAVLDEVDEDEHKVLELASLIRFYRDPARFFCQRRLRLDLSHRLDALDDSEPFDVDAL 873 Query: 876 SRYQINQQLLNALVEQD------DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 RYQ+ ++LNA +E D + L R AG LP F ++ + + +++ + D Sbjct: 874 GRYQLQDKMLNAALEADEIRQQLAVDTLCDRLAGAGVLPMAPFDKLLFASYQRDLAPILD 933 Query: 930 RVIACRQPGQSMEIDLAC---NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV 986 R + + ++ G ++ G + +V GLL RP + L+L HL Sbjct: 934 RCRFIMGETEGQSLRISLVLNQGHKLVGTIDKVFAKGLLVARPGTAKAKDVLALYLRHLC 993 Query: 987 YCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWL 1046 CASG S L + F PL + AL L I Y E + P ++P ++ Sbjct: 994 LCASGYRQSSFLLDVGN-FHAFLPLTPDNALTSLEDFISHYFESVRTPSPLIPALAMTYI 1052 Query: 1047 KTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIV 1106 + + ++ +++ + ++ GE + +RL+ A Sbjct: 1053 EALAEG---------ASEEESLAELSTKWDDG-NGMGEIAEPHNERLFEFPASFATPAFT 1102 Query: 1107 EQSQRFLLPLF 1117 ++R PL Sbjct: 1103 VVAERLWKPLL 1113 >UniRef50_Q3ASJ4 DNA helicase/exodeoxyribonuclease V, gamma subunit n=8 Tax=Chlorobiaceae RepID=Q3ASJ4_CHLCH Length = 1127 Score = 795 bits (2053), Expect = 0.0, Method: Composition-based stats. Identities = 386/1145 (33%), Positives = 585/1145 (51%), Gaps = 82/1145 (7%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L +Y SNR+++L + +V + L FE E+I+VQS GM +WL M L+ +FG+ AN Sbjct: 33 LHLYTSNRMEMLVDSLAEVVRQ-PLASVFEHEVIVVQSRGMQRWLSMELAGRFGVWANGR 91 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 +P P + + ++F ++LP + + AF K+ MSW++M LLP LLE +F LR Y DDSD Sbjct: 92 YPFPNAMVQELFKQLLPSVAQSDAFKKEVMSWRVMRLLPHLLEMAEFLPLRRYAADDSDG 151 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 KLFQLS K AD FDQY ++RPD LA WE +AWQ LW+ALVE Sbjct: 152 LKLFQLSEKIADTFDQYTLFRPDMLALWE--AGGGVAEGGEAWQPLLWRALVEGAG---- 205 Query: 182 PRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 HR L + L +++ LP R+ + GIS LP +L+ A+ + E+HL Sbjct: 206 --LHRGQLRELLFRQLSRSSSKISELPERITLFGISYLPQFHLELFAAVARLTEVHLFLL 263 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA 301 +P + YWGDI +A+L ++ + GNPLLA Sbjct: 264 SPTQEYWGDIVSRKAMARLSEAEQ-------------------------ALRSEGNPLLA 298 Query: 302 SWGKLGRDYIYLLSDLESS--QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 S G++GRD+ ++ ++ + + D D+LLH +Q DIL L+ Sbjct: 299 SLGRIGRDFSEMVLEMSDEALDSQEFYDDPPEDSLLHALQWDILHLQGAGEMD------- 351 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 + R L P D S+ H CH+P REVEVL+D +L +LE P ++ RDIIVM DI+SYS Sbjct: 352 --ETPRLLQPHDRSVQIHACHTPLREVEVLYDAILGLLEAHPHISLRDIIVMTPDIESYS 409 Query: 420 PFIQAVFGSAPADRY-------LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 P+I VFG+A LP++I+DRR + A + LL+L SR + + Sbjct: 410 PYIATVFGTAREAGKEGKGVVALPFSIADRRMMHEGEIASALLKLLALHGSRLTASMLFD 469 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 L P ++ F E LR +R W+ SGIRWG+D+++ RE LPA H+WR GL R+L Sbjct: 470 FLASPPVSRAFGFDAEALRLIRGWIEGSGIRWGMDEEDRRERNLPAYRDHSWRAGLERLL 529 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 LGYAM + +Q VLPY + +G AE++G A + L + R LE W Sbjct: 530 LGYAMPEEEQLFQGVLPYGDIAGSAAEMLGRFAEAVEALERFVSSSEPSRTLEAWRQQYA 589 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 L FF PD ++E + + + G+ A + + + + L RL+++ Sbjct: 590 MWLTTFFAPDEDSEREFATLATLGEELAEYGINAGFEENISPLVFFTWLRSRLEEQEQGL 649 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 F+ G + C ++PMRSIPF+VV L+GMNDG +PRQ FDL++++P++GDRS R++D Sbjct: 650 GFMTGGITFCAMLPMRSIPFRVVMLIGMNDGAFPRQSRAPSFDLITRQPQKGDRSLRNED 709 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 RYLFLE+++SA++ LYISY+G+SI+DNSE PSVLV EL+D + ++ LP + Sbjct: 710 RYLFLESILSARELLYISYVGQSIRDNSEIPPSVLVSELLDAVRRAFVLPNE-------- 761 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGE-RQSYAREWLPAASQAGKAHSEFVQ--------- 822 + ++ HL H PF + SY+ E A + ++ Sbjct: 762 -SSIEQHLVVRHRLQPFHHDYFSEHSPLASYSSENYYALIASEQSLQAVPPIRSFISTAL 820 Query: 823 PLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 P TV LE L F+ +P F + RL + + D+EPF +E L RY++ Q Sbjct: 821 SEPTAEWRTVQLEQLLHFYDNPSAFFLEQRLGIKPEGLLLPLQDSEPFAVESLERYRLQQ 880 Query: 883 QLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ--- 939 +LL A + AE L F++ G LP GE+ + T QE+ A + Sbjct: 881 ELLEAQLRGQPAEALLPLFKSRGMLPPAQHGELLFATVMQEVDDFAATLRQHLAGEVALA 940 Query: 940 SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASG--GNGESR 997 +E+D+ +I G L + + +LR+RP+ + V + W+EHL+ CA G + Sbjct: 941 PLEVDIEVGEFRIVGRLDGIWANAMLRYRPARMKVRDRFRWWIEHLLLCALQPTGYPLTT 1000 Query: 998 LFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAM 1057 L DGEW +PP+ + +L+ L++ Y +G+ PL P S A++ DA + Sbjct: 1001 HMLMSDGEWSYPPI--DNPHQHLTTLLQRYWQGLCEPLPFFPRSAYAFVLKGMDA--NHH 1056 Query: 1058 LDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLF 1117 LD + A ++ N +GEG D QR + + +E + P+ Sbjct: 1057 LDVGKGIDAAYREWRDDTFTN--RKGEGSDSAIQRCFGAAANPFSDTFIELALELFTPMM 1114 Query: 1118 RFNQS 1122 + Sbjct: 1115 EAMGA 1119 >UniRef50_Q15V11 DNA helicase/exodeoxyribonuclease V, gamma subunit n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15V11_PSEA6 Length = 1166 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 406/1195 (33%), Positives = 595/1195 (49%), Gaps = 108/1195 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIV--ERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAA 58 ML + SN+++ L A + + + LDD F P+++LVQS GMAQWL++ ++Q GI+A Sbjct: 1 MLHLVQSNKMESLAAYLIGWLGESKSSLDDIFSPDVVLVQSPGMAQWLKIEIAQALGISA 60 Query: 59 NIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 NIDFPLP+S+IW ++ + ++P++SAF K +M+WKLM++LP++ +R +F + YL DD Sbjct: 61 NIDFPLPSSYIWQLYKGHVNDLPEQSAFTKDNMTWKLMSILPEMSDRTEFASIAQYL-DD 119 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL--VEGLGEAQAWQAPLWKALVEYT 176 KL+QL K AD++DQYLVYRP+W+ WE G + AQ WQ LW+ALVEY Sbjct: 120 QQPLKLYQLCQKIADIYDQYLVYRPEWILAWEQGENNVADTDVSAQPWQPILWRALVEYA 179 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 +L + +HRANL+ R + LE + L +F+ G+SA+P L+ AL K ++ Sbjct: 180 KELDESPYHRANLHTRLMAELEDTKSSKDELKP-LFVFGLSAMPVQQLEIFSALAKSRDV 238 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 + + NP +YWGDI D + + + L + L D VG Sbjct: 239 IIFWFNPSAHYWGDIVDNKQVLQAKLQ---------SLLAQASEDAQSGLSGMDDYLLVG 289 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 NPLLASWGK GRDY ++ LE DAF++ P++LL ++Q ++L L +R Sbjct: 290 NPLLASWGKQGRDYQDMILGLEVELH-DAFIEQEPESLLEHMQHEVLALTHRGAIEPLPA 348 Query: 357 E----FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 + K PL D ++ H CHS RE+EVLHD+LL + + P L P D+IVM+ Sbjct: 349 QELLTNGEEYPKIPLAEDDMTLQVHACHSAVRELEVLHDQLLHLFADHPELHPGDVIVMM 408 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 D+ SY+P I VFG ++PYAISDR A+Q P+L +FI L+SL SR DVLA Sbjct: 409 PDVASYAPIIDGVFGGTDKALHIPYAISDRNAQQESPLLNSFIQLMSLHQSRIGLSDVLA 468 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 L +VP + +FDIT E L W+ ++G+RWG D + LP Q+TW FGL R+L Sbjct: 469 LCEVPAVQRKFDITPEEFDLLSVWLADAGVRWGWDGQDKTRWALPNEPQNTWLFGLQRLL 528 Query: 533 LGYAMESA---QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 GYAM + + PY+ G +G +L L + Sbjct: 529 AGYAMGGESMFDDAHEPIAPYEHIEGQHVVALGKFYLFSRELGNALAFCQSAASLHAKIK 588 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 ++ +LPD + + + + Q + + Q+ + + EL Q L + Sbjct: 589 GALSLIEQLYLPDDDDQTYVLQLRQSLEQMT--VHEHQFSGEIVHDVFLAELEQSLSSKG 646 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS-QKPKRGDRSR 708 + QRFLAG VN CTLMPMRS+PFKVVCLLG+NDG YPRQ+ P+GFDLM K +RGDRSR Sbjct: 647 VGQRFLAGYVNFCTLMPMRSVPFKVVCLLGLNDGDYPRQVVPVGFDLMRIGKGRRGDRSR 706 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 R DDRYLFLEA++SA+++LY+S+ G S +DNS R PS+L+ EL++Y Q+ L GDE+L Sbjct: 707 RLDDRYLFLEAILSARKRLYLSFQGFSAKDNSPRSPSILLSELLEYTQQTFCLAGDESLE 766 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQ-----------PGERQSYAREWLPAASQA---- 813 + H+ H PF+P + P S+ WL A Q Sbjct: 767 TKTCADNLAKHIYHEHALQPFNPVYFATKRDAHEEEPLPSAMASFQTPWLALAQQLTDGS 826 Query: 814 ---GKAHSEFVQPLPFTLPE----TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 K PL V L+ L F+++P +AFF R Q D Sbjct: 827 VHSDKEVDFCPAPLFSLPELAQVTEVELDELLIFFSNPAKAFFSQRWQTRLTRVYDVQSD 886 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 EPF L+ LSRY +N++ + + R RA G LP G +I + ++ + Sbjct: 887 DEPFELDALSRYVLNERFV-----TTQQQDWTTRLRAEGKLPTGNIADISLQPIRKQSRA 941 Query: 927 LADRVIACRQ------PGQSMEIDLAC-------------------------------NG 949 L D ++A P E++ Sbjct: 942 LIDALVALIGGPLDEVPPTRAEVNFELSYLLDISPVPASELNANTNSSTQNSVSATSTQR 1001 Query: 950 VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGES----RLFLRKDGE 1005 +QITGW+ + L+ WRP + +QLWL L CA+G + + + Sbjct: 1002 IQITGWVDNLYGGNLVLWRPGKVKGNNVLQLWLTWLALCANGSVAKHQRAYYIGVEDKEP 1061 Query: 1006 WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQ 1065 + + ++A L+ I +R G L P++ WL +A Sbjct: 1062 FSIGAVDKDEAKTQLAIFIRYWRLGQLQVLHFYPKTAYEWLSVGDEA------------- 1108 Query: 1066 KARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFN 1120 KA K A+ G+ +GEG++ +R+ L + A E S PLF Sbjct: 1109 KALMKAKNAFYGSYFAKGEGEEPHIRRVCPDLN-QHFCAFSEVSHALFDPLFDAL 1162 >UniRef50_Q9CM76 RecC n=1 Tax=Pasteurella multocida RepID=Q9CM76_PASMU Length = 1124 Score = 791 bits (2043), Expect = 0.0, Method: Composition-based stats. Identities = 432/1166 (37%), Positives = 641/1166 (54%), Gaps = 88/1166 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +Y+SN LDV + ++ +++ LDDPF+ ++ILVQS GMAQWLQ ++++ GI++NI Sbjct: 1 MFTIYYSNDLDVQKNILLTLMQDT-LDDPFQSDVILVQSPGMAQWLQWKIAEQQGISSNI 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD-- 118 FP+PASFIW +V LP ++S FNK SM+W+LM L+P+ LE+ +F LRHYL+ Sbjct: 60 KFPMPASFIWQQYVDNLPNTEEQSQFNKASMTWRLMRLIPEHLEQVEFQSLRHYLSSSHQ 119 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA--------------- 163 ++++KL+QL+ + ADLFDQYLVYRP+W+A WE G + + + Sbjct: 120 TEQQKLYQLAYQIADLFDQYLVYRPEWIACWERGDEATMMAQLERKLKDTRLPIGNAFSQ 179 Query: 164 ---WQAPLWKALVEYT--HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA 218 WQA LW+ALV HRA L +F++ L++ P LP R+FI GISA Sbjct: 180 DVKWQAILWRALVADILAESGQTVPLHRAYLQTQFLQFLQTQ--HPVNLPPRLFIFGISA 237 Query: 219 LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFR 278 LP YL+ A+ ++ E+HL FTN CR YWGD+ DP ++ +L QR +P+F Sbjct: 238 LPKGYLEIFYAMSQYCEVHLFFTNGCREYWGDLIDPRFMQRLSQMQRTGYHTALPIPVFH 297 Query: 279 DSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQ---ELDAFVDVTPDNL 334 ++NA + D G+PLL+SWGKLGRD++YLL++LE + +DA+ ++T +L Sbjct: 298 HTDNARFESSYDHEHLFEGHPLLSSWGKLGRDFLYLLTELEQLEGVRSIDAYTELTSQHL 357 Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 L +Q+ IL LE L D S+TFH CHSP REVEVLHD LL Sbjct: 358 LSQVQARILHLE--------------GKQGLNLAENDRSLTFHSCHSPMREVEVLHDYLL 403 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA--DRYLPYAISDRRARQSHPVLE 452 + ++D TLTP+DI+VMVADID Y+P+IQAVFG R +P++ISD R ++ ++ Sbjct: 404 HLFQQDSTLTPKDIVVMVADIDKYTPYIQAVFGQYNQVAQRQIPFSISDNRLSENDVLIA 463 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 +FI LL+L +S+F +ED+LALLD+P + RF I L +R WV +GIR+G++ + Sbjct: 464 SFIHLLALKESQFSAEDILALLDIPAIRNRFQIELMELEQIRHWVAHAGIRFGVEKEQ-- 521 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 ++W+ GL RMLLGYAM G WQ L +D GL +L G LA + +L+ Sbjct: 522 --GKQEKNTNSWQAGLERMLLGYAMREENGIWQGNLGFDPCYGLQGQLAGRLAEFIARLS 579 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 W + L +P+E+W +L FF D + I++ ++ + + + Sbjct: 580 AWYQFLQTPQPIEKWQQHLLTLLTDFFAEDETNITTLRYIQETIVQMVTDIQQTHFDQPL 639 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 ++ D L+ L+ + S +FLAG VN CTL+PMRSIPFKVVCLLGMN+G YPRQ P Sbjct: 640 SSEVVSDVLSALLEDDPNSMKFLAGKVNFCTLLPMRSIPFKVVCLLGMNEGDYPRQQTPN 699 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 FDLM ++ DR RRDDD YLFLEAL+SAQ+ Y+S++GRSI DN + PSVLV +LI Sbjct: 700 SFDLMQYDRRKADRFRRDDDCYLFLEALLSAQEAFYVSFVGRSIVDNQSKPPSVLVSQLI 759 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 DY+ +A L H F P N++ S+A +WLP A+ Sbjct: 760 DYLVDKL---------SSAETQDWQARLIEQHPMTAFSPDNFRGEN-GSFANQWLPLANI 809 Query: 813 AGKAHSEFVQPLPF---TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 + ++FVQP+ + L L F HPV FF+ L V+F ++ I D+E Sbjct: 810 QKQERADFVQPIAQTVLAEDREIVLADLIAFIQHPVAFFFKRHLGVSFAKQEERIEDSEN 869 Query: 870 FILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 F L+GL RYQIN+QLL +++ + + + + G LP G F +IF Q +++ L Sbjct: 870 FTLDGLMRYQINEQLL--YCDEEKSAEVLAQLKVKGMLPRGEFAQIFALQQQEDIAALKT 927 Query: 930 RVIACR-QPGQSMEIDLAC----NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 V Q +E+DL +++ G L Q+ + WR + ++ W+ + Sbjct: 928 TVADYLKQEAHVVEVDLTIPSGYGDIRLIGLLDQLYAQRRVMWRVGQIQEKHLIENWVYY 987 Query: 985 LVYCASGGNGESRLFLRKDGEWRFPPLAAEQ-------ALHYLSQLIEGYREGMSAPLLV 1037 L+ CA E ++ K+G+ F L A + AL L +E Y +G +V Sbjct: 988 LIQCAMLAQHEPPIYYGKNGQATFQALCASESLSVKEIALAQLQIYVESYLQGYQQMQMV 1047 Query: 1038 LPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ- 1096 ++ +L+ + + RT EG+ G DI++QR+ Q Sbjct: 1048 PMKNIQRYLEAY-------GHTETPDFEMIRTLLHHLAEGDYASDG---DIYWQRVLAQQ 1097 Query: 1097 -LTPETMEAIVEQSQRFLLPLFRFNQ 1121 L E + AI E++ + +F + Sbjct: 1098 VLDEERLNAIGERTTSWFKLMFEQLE 1123 >UniRef50_A8ZX08 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZX08_DESOH Length = 1085 Score = 787 bits (2031), Expect = 0.0, Method: Composition-based stats. Identities = 358/1132 (31%), Positives = 544/1132 (48%), Gaps = 73/1132 (6%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 + + SNR+++L + LD+PF E I+VQS GM +WL M +++ GI A+ Sbjct: 1 MYFFTSNRMEMLSRAFCEALTAYPLDNPFARETIVVQSMGMKRWLSMEMARHTGICAHNR 60 Query: 62 FPLPASFIWDMFVRVLPEIPKESA-FNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 F P +F+ M + S ++M+W + +L + + L+ YL D D Sbjct: 61 FLFPNAFLNQMLQTAFADAVPVSPDVGVEAMTWAVFPVLADVFAHPALSPLQAYLQ-DGD 119 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 K +QL+++ AD FDQYLV+RPD L QWE G L + WQA LW+ L+ Sbjct: 120 VIKRYQLAARIADTFDQYLVFRPDMLLQWEAGALPA--DPHEKWQAHLWRLLISQGW--- 174 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 RA +++F+ +S LPSRV + GIS LP ++Q AL +E+ Sbjct: 175 --AEQRAERWKQFLSLAQSGALAGSTLPSRVSVFGISTLPRFHVQVFAALSAFLEVRFFV 232 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NPCR+YWGDI E +A + + + GN LL Sbjct: 233 LNPCRHYWGDILS-----------------TYEKKQVETGADARDIPEAARHLETGNSLL 275 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 AS G + RD+ ++ D QE F +L +Q+DIL+L++ A Sbjct: 276 ASMGMVARDFFAMVEDH-PHQETSLFAPAGETTMLACLQNDILDLKDAADQ--------- 325 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + +D D+S+ VCHSP REVE LHD LLAM E D L+P D++VM +++ Y+P Sbjct: 326 --ERVRVDGNDASMQISVCHSPMREVEALHDNLLAMFEADAGLSPEDVLVMAPNMEVYAP 383 Query: 421 FIQAVFGSAPADRY--LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 +++AVF + D +PY ++DRR++ PV+ F+ L+ L +SRF VL +L+ Sbjct: 384 YVEAVFDAGADDGGQRVPYTVTDRRSKSGSPVVRTFLGLMDLWESRFGISAVLEILESAF 443 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 + RFDI E + QW+ ++G+RWG+D + +LP ++TW+ G+ ++LG AM Sbjct: 444 VRERFDIGEAEFFRISQWLVDAGVRWGLDGAFKTDRDLPEFSENTWKQGIDSLVLGCAMA 503 Query: 539 -SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + + +LPYD G + + + L + R W + ++ + Sbjct: 504 GKGEILFDGLLPYDHMEGSDVDSLEKFLAFWHVLLRFYRQCGGAHAPGRWRQILTALVES 563 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 F D EA + +I A+ A + V L ++R+ L +R + + F++G Sbjct: 564 MFAADPAVEADLQVITDALNALGESAAHAGFDGPVDLPVIREFLNRRFEGQAYGAPFISG 623 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V C+++PMRSIPF V+CLLGMN YPRQ GFD++ + P+ GDRS+R+DDRYLFL Sbjct: 624 GVTFCSMLPMRSIPFAVICLLGMNVDDYPRQTFSPGFDMIRKHPRPGDRSKRNDDRYLFL 683 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 E L+SA+++LYISY+G ++DNS+R PSVLV EL DY+ + V Sbjct: 684 ETLLSARRRLYISYVGHDMRDNSDRPPSVLVGELCDYLRERFDAG---------PLTDVV 734 Query: 778 AHLTCLHTRMPFDPQNYQPG--ERQSYAREWLPAASQAGKAHSEFVQPLPFTL------- 828 +T H PF P + R SYA ++L AA Q L + Sbjct: 735 EKITTHHRLQPFHPDYFSSDTQARFSYAADYLAAARQLAGGRPGRPAALEPAVPVPDNAD 794 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 P+T+ +E L RF+AHP R F RL + D + EPF + GL RY + ++L+ L Sbjct: 795 PQTIEVEDLCRFFAHPARYFLTQRLGLRVAETDRIPEEAEPFEVAGLERYDMARRLVERL 854 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD--RVIACRQPGQSMEIDLA 946 + +D A L RA+G LP+G G+ +E R + EI L Sbjct: 855 LAEDPAAPLENALRASGILPHGEPGKRLFERLKTGAAGFVAGVRAVTANGGLDRREIRLD 914 Query: 947 CNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEW 1006 NG + G L + R+R + + W+ HL + G S F +DG W Sbjct: 915 INGTTLCGTLDGIGEQEWFRFRYATARPGDFITNWIAHLAWSVDQGRAGSGRFAARDGWW 974 Query: 1007 RFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQK 1066 F P+ + L L+ LIE YR+G PL P S + +T N +M Sbjct: 975 AFDPV--DNGLSILAALIEIYRQGRLRPLHFFPRSAFVYAETLQKKGNASM--------- 1023 Query: 1067 ARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 A + LQA+ GN V GE +D +Y + + S + PL Sbjct: 1024 ALDRALQAWRGNERVAGEKEDPFYALWFAG-DDPLDDEFETLSTAVVTPLLA 1074 >UniRef50_C0N788 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N788_9GAMM Length = 1069 Score = 782 bits (2019), Expect = 0.0, Method: Composition-based stats. Identities = 371/1137 (32%), Positives = 580/1137 (51%), Gaps = 88/1137 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML++ +SN L A + + E L P +PE I+VQS +++WL + L++ IAAN+ Sbjct: 1 MLKIVYSNDTGQLAAWLADHLLSEPLP-PLQPETIIVQSNELSRWLSLRLAKTHQIAANL 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +FP P+++IW +F ++ P++P +S + K+ M+W+L LLPQ + F + YL D D Sbjct: 60 EFPFPSAYIWQLFRQLWPDVPLQSPYAKEPMAWRLFELLPQAASLDGFEAVAAYLGGDDD 119 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 K ++L+ K AD FDQYL+YRPDW+ QWE G +WQ LW+ L Sbjct: 120 DLKRYELAEKIADTFDQYLMYRPDWVQQWEQGQAT-------SWQGKLWQMLTAD----D 168 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 HRA L Q+ + L + PPGLP+R+ I GISALPPVYL+ + L ++++I L + Sbjct: 169 PQPMHRARLLQQLHDLLSHSDVVPPGLPNRISIFGISALPPVYLEIVNLLARYVDITLYY 228 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 +P +YWGDI DP + L ++ E + G+PLL Sbjct: 229 LSPSEHYWGDIIDPKKQQRQQL----------------------LLDFNEDEIEPGHPLL 266 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 AS GK G+ + L + + FV+ + +L ++ DI E+ + Sbjct: 267 ASLGKQGQAFFRQLQE-TQHLDDSCFVEPVGETMLSQLKRDIFEMATDQPSVAV------ 319 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 D+SI+ VCHSP RE+E+LHD+LLAM E++PTLTP DI+VM DID Y+P Sbjct: 320 --------KDDTSISIQVCHSPMREMEILHDQLLAMFEQNPTLTPTDIVVMTPDIDVYAP 371 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +I+AVF +A R++P++I+D +Q ++ F S L LP SRF E +LA+L+ P + Sbjct: 372 WIEAVFATADKSRFIPFSIADSSGQQESLLITTFYSFLQLPQSRFDVESILAMLECPAVQ 431 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 RF + + L ++R+W ++ RWG+D ++ L+LP T +TWR GL R+LLGYAM Sbjct: 432 RRFGLDDAALNWIREWCQQTRTRWGLDANDKAALDLPDTESNTWRAGLDRLLLGYAMPLN 491 Query: 541 Q-----GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 + + L D SG A +V L + L+ WR+ LA++ + +W L Sbjct: 492 EPDQPWRLFDGQLAMDGISGERAHIVAALCDFIDALDAWRQRLARQNTIADWQKQLNQCL 551 Query: 596 NAFF----LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 +AFF L + + E +T I Q + + + A + + L+ L L + Sbjct: 552 DAFFNTEGLEETQFETEITAIRTQLERLSSGAKQADFEQTIGADLILSWLQSHLQPVDNA 611 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 RFL + C ++PMRSIPF VVCL+GMND V+PR+ + FDL++ + GDRSRRDD Sbjct: 612 HRFLGHGITFCGMVPMRSIPFDVVCLVGMNDEVFPRRQPSVSFDLLAHDHREGDRSRRDD 671 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 DRYLFLEAL+SAQQ Y+SY+G S+ DNSE PSVLV +L D + + E Sbjct: 672 DRYLFLEALLSAQQTFYMSYVGASVVDNSEIPPSVLVSDLQDLLAERFET---------E 722 Query: 772 SEARVKAHLTCLHTRMPFDPQNYQ--PGERQSYAREWLPAASQAGKAHSEF-VQPLPFTL 828 + A + + H F + + + S+ P +A+ P Sbjct: 723 TTATILEQIITKHPLQAFSRRYFDGNNDQLFSFNASHCPTQEMLEQANWFETPLPEADDS 782 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 V + L RF+AHP + + RL + ++ + EPF L+GL +Q+ Q +++ Sbjct: 783 WRQVTRDQLIRFFAHPTKFILRERLGIRLELDEEALESREPFALDGLESWQLRQWIVDES 842 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP--GQSMEIDLA 946 + Q E L +A G LP G G+ ++E + Q + +++ ++ IDL Sbjct: 843 LSQHSDEGLKPVVQATGMLPQGRLGDAWFEKESQTVDDFIEKLRPVLPEQGWITLAIDLN 902 Query: 947 CNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGES--RLFLRKDG 1004 +G QI G LPQ GLLR+R + + W++HL+ G + + +D Sbjct: 903 IDGFQINGQLPQFSQQGLLRYRLAKKKGKDLIAAWIDHLILNILKPEGVTLQTHLILQDA 962 Query: 1005 EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTL 1064 E+ F P+ L+ L++ Y +G PL ++ A+ T + + Sbjct: 963 EYVFLPVTGPT--QILANLLKLYWQGCHLPLKFFDQASLAFAATYFGKKP---------- 1010 Query: 1065 QKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 ++ K + + GEGDD +Y+RL+ Q P + E + + PL + Q Sbjct: 1011 EQKFKKAHDKWSASGDFAGEGDDNYYRRLYSQ--PPLDDEFAELAIQVYEPLQQHLQ 1065 >UniRef50_Q12LP5 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Bacteria RepID=Q12LP5_SHEDO Length = 1375 Score = 780 bits (2014), Expect = 0.0, Method: Composition-based stats. Identities = 399/1324 (30%), Positives = 608/1324 (45%), Gaps = 234/1324 (17%) Query: 1 MLRVYHSNRLDVLEALMEFIVERE-RLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML + SN+++VL + ++ + E +LVQS GM+ WL++ +++ GIAA Sbjct: 1 MLTLIQSNQMEVLSEQLAKLLATPLDETNLLASEHVLVQSPGMSTWLRLEVARHNGIAAA 60 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYL---- 115 ++FPLP+SFIW + +LP++PK++AF K +M+WKLM LLP+LL+ DF L +YL Sbjct: 61 LEFPLPSSFIWQLCHTLLPDVPKDNAFTKPAMTWKLMDLLPRLLDDADFAPLANYLTTEL 120 Query: 116 ----------------------------------TDDSDKRKLFQLSSKAADLFDQYLVY 141 + D K +QL S+ AD+FDQYLVY Sbjct: 121 ATELAPELAPELATEIKPDQAAAAPDSRSQAIVLSAAQDAIKRYQLCSRIADIFDQYLVY 180 Query: 142 RPDWLAQWETGHLVE------GLGEAQAWQAPLWKALVEYT-HQLGQPRWHRANLYQRFI 194 RP+W+ WE + L ++Q WQ LW+AL++Y +LG +HRANL++ + Sbjct: 181 RPEWILAWEQNKPLTSLDNKLKLDDSQLWQPKLWRALIDYNRDELGASPYHRANLHESLL 240 Query: 195 ETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDP 254 E L + LP R+F+ GIS++PP L+ L L I + +L +PC +YWGDI DP Sbjct: 241 EALADEQSSVANLPQRLFVFGISSMPPQTLEILHQLAGRIPVVMLALSPCEHYWGDIIDP 300 Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLL 314 A++ + ++ + + +VGNPLLA+ GKLGR+ + L+ Sbjct: 301 KTRARMALQY---------------ADKKQLAQDWESSLEVGNPLLANNGKLGRELLDLM 345 Query: 315 SDLESSQ------------ELDAFVDVTPDN----------LLHNIQSDILELENRAVAG 352 L S +++ D D LLH +Q DIL++E V+ Sbjct: 346 LALPSEHTDFGYDCYVKPWDINLHSDDENDAVPVNTPQNAKLLHGVQYDILQMETLGVSL 405 Query: 353 VNIEEFSRS-DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + N+R L P D SIT CHSP REVE LH+ LLAML P L P+DI+VM Sbjct: 406 GPDAALYNNIPNRRLLQPDDDSITIRTCHSPLREVETLHNHLLAMLSRCPQLHPKDIVVM 465 Query: 412 VADIDSYSPFIQAVFGSAPADR------------YLPYAISDRRARQSHPVLEAFISLLS 459 + D+ +Y+P+I AVFG+A A+ Y+PYAI+DR A P++ +F+SLL+ Sbjct: 466 MPDVAAYAPYIDAVFGTANAEASGIDGARQQGNSYIPYAIADRGAAAESPLINSFLSLLN 525 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + SRF +++ +L+VP + RF ++ + L +R W++E+ +RWG D+ + L LPA Sbjct: 526 INQSRFALTEIMGILEVPAILRRFKLSGDELSQIRLWLDEANVRWGRDEHSRAALNLPAF 585 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 Q++W FG+ R++LGYA +Q L G A+ +G L + L L+ +R A Sbjct: 586 EQNSWAFGIRRLILGYAFHDGAPLYQDTLLVPGLEGQSAQALGKLMNFLETLDDYRALFA 645 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 L + +L F D + + I + + E GA + + + +L+ Sbjct: 646 APCTTSSRLFELQTLLQDIFEADDDEREEIQAINEAIAKLSEELNGAGHQGMLDIEVLKI 705 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 QRL + R+ QR+LAG VN CTLMPMRSIPF +VCLLGMNDG YPR P+GFDLM+ Sbjct: 706 WFNQRLSESRVGQRYLAGSVNFCTLMPMRSIPFNMVCLLGMNDGDYPRVQHPVGFDLMAH 765 Query: 700 KP-KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 K+GDRSRR DDRYLFLEAL+SA+++LYISYIG+S +DNSER PS+LV ELI+Y Sbjct: 766 FGAKKGDRSRRADDRYLFLEALLSAREQLYISYIGQSERDNSERIPSMLVSELIEYCQLC 825 Query: 759 HYLPGDEA-----------LNCDESEARVKAHLTCLHTRMPFDPQNYQPGE------RQS 801 + P + + + A L PFDP+ ++ + +QS Sbjct: 826 YLTPEMKEQLSKLDEEQILALSKPCDDALLARLIQAQPLQPFDPKLFRDNQALGIALQQS 885 Query: 802 YAREWLPAASQAGKA--------------------------------------------- 816 Y +W P ++ A K Sbjct: 886 YHSQWCPPSTPANKTTTAPASAAASGSASAETSVNTWVMNSSGRFLGPNQSLPQSILADS 945 Query: 817 ------HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 + + + L L RF+ +P + FF L+V+ + + EPF Sbjct: 946 LWPQWHSDLEERAVFAATDAELELSALLRFFRNPSQFFFNRSLKVDLSLDIQADDNDEPF 1005 Query: 871 ILEGLSRYQINQQLLNALVEQD----------------DAERLFRRFRAAGDLPYGAFGE 914 L L RY + +LL+ ++ D L + +AAG LP F E Sbjct: 1006 SLNALERYLLQAKLLDKILAPDLDTSDLDNNGDDRKKTPEASLTQALKAAGSLPMAPFDE 1065 Query: 915 IFWETQCQEMQQLADRVIACRQPG-QSMEIDLACN------------------------- 948 + ++M L RV R + ++L Sbjct: 1066 LLLSQYQRDMAPLIGRVQFMRGEQCEPRSLNLELEFSFSPGQILANSLELSEISLEPALI 1125 Query: 949 --------------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNG 994 + + G + + P GL+ +RP ++++L HL ASG Sbjct: 1126 NSPELAHNAAQAPLKLTLLGRIDDILPKGLINYRPGAAHGRDLVRVYLRHLCLNASGQQQ 1185 Query: 995 ESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQN 1054 S L F P+ A L I Y +G + PL +P + A+++ Sbjct: 1186 TSYLLDM-AQFHSFAPITPAHATAQLKAFILAYIQGQTRPLCFMPRTAFAYVEAP----- 1239 Query: 1055 DAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLL 1114 + Q+ + + GEG + RL+R T + L Sbjct: 1240 -------GSHQEKLIAAQKLWRDEQNQLGEGFEPHNHRLFRFPDDFTESGFGAIATTLLS 1292 Query: 1115 PLFR 1118 P+ Sbjct: 1293 PMLS 1296 >UniRef50_Q3B473 DNA helicase/exodeoxyribonuclease V, gamma subunit n=1 Tax=Chlorobium luteolum DSM 273 RepID=Q3B473_PELLD Length = 1075 Score = 771 bits (1991), Expect = 0.0, Method: Composition-based stats. Identities = 372/1139 (32%), Positives = 574/1139 (50%), Gaps = 86/1139 (7%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 ++ SNR +VL A + PF E+++VQS GM +WL M L+++ G+ A Sbjct: 3 FNIHTSNRTEVLAADLASYFAASPPASPFSREVVVVQSRGMQRWLSMELARRLGVWAGAR 62 Query: 62 FPLPASFIWDMFVRVLPEIPKES-AFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +P P + + ++F V P E+ ++ + +W +M LLP +L E F +L YL+ S Sbjct: 63 YPFPNAVVSELFRHVFPSKEDEAGRYDPECTTWSIMRLLPSMLRDEPFAILSRYLSGSSA 122 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 +L+QL++K AD FDQY ++RP+ LA WE G G WQ+ LW+ L Sbjct: 123 PLRLYQLATKIADSFDQYTLFRPEMLALWEAGEGTAGPD---GWQSILWRRLNAELGG-- 177 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 HR L + F + T P R+ + GIS LP +L L A+ +H E++L Sbjct: 178 ---RHRGILKEAFC---RNGTLPDAVFPRRIALFGISYLPQFHLDILSAIARHREVNLFV 231 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 +P YWGDI L+ + +R GNPLL Sbjct: 232 LSPTEEYWGDIVSRRTLSGMTHAER-------------------------ELHAEGNPLL 266 Query: 301 ASWGKLGRDYIYLLSDL--ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 AS G++GRD+ ++ ++ E ++ ++ ++D D LLH IQSDIL L Sbjct: 267 ASLGRIGRDFSDMVLEIPDEQNRTVERYIDPRRDTLLHAIQSDILTLSGTGEG------- 319 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 + D S+ H CHSPQREVEVLHDR+L MLE P L PRDI+VM DI++Y Sbjct: 320 ----ERPVCSATDRSVQVHACHSPQREVEVLHDRMLDMLESIPGLAPRDIVVMAPDIETY 375 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 SPFI AVFGSA A+ +P++++DRR V A + LL L SR + ++ LL P Sbjct: 376 SPFITAVFGSA-AEGRIPFSVADRRLMNEGEVSSAVLRLLELHRSRASAPELFDLLSSPP 434 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 +A RF + L+ +R W+ ++ IRWGID++ +LPA Q+TWR G+ R+LLGYAM+ Sbjct: 435 VARRFGLDVSALQSIRGWIVDTRIRWGIDEEERSMNQLPAFRQNTWRAGIDRLLLGYAMD 494 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 S + + +LP++ G AE +G A + ++ +R GL++ R LEEW ML F Sbjct: 495 SRESCCEGILPFEGVDGGAAETIGLFADFIDAVDRFRHGLSKTRTLEEWRVFFISMLEHF 554 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 L + ++ ++ + + + Y D VP ++ L RL Q+ F+ G Sbjct: 555 MLTEEDSTREFLAVQDLMERMGEISRLSAYHDEVPPEVVIAWLQGRLQQKEQGLGFMTGG 614 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 V C+++PMRS+PF+VV +LGM+DG +PRQ P GFDL+S+ PKR DRS R +DRYLFLE Sbjct: 615 VTFCSMLPMRSVPFRVVVMLGMDDGAFPRQQHPPGFDLISRHPKRADRSVRAEDRYLFLE 674 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 ++SA+ LYIS++GRS +D+S PSVLV EL D I + LP R + Sbjct: 675 TILSARDVLYISFVGRSRKDSSPIPPSVLVSELFDAIDRGFLLPE---------GVRAEE 725 Query: 779 HLTCLHTRMPFDPQNYQPGE-RQSYAREWLPAASQAGKAHSEF-----VQPLPFTLPETV 832 L H PF P + G SY+ E ++ A E P P + V Sbjct: 726 MLLFSHPLQPFSPACFSAGGPLFSYSEENFLPHAEHSGAGPEPLFMDSPLPEPGEPLQRV 785 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD 892 L L F+ +P F + RL + + + + EPF L+GL Y+I +L A++ + Sbjct: 786 ELMDLIGFYDNPSAFFLRYRLGLQPAGQVLPLDEREPFGLDGLDAYRIRAELAEAMLLEG 845 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL---ADRVIACRQPGQSMEIDLACNG 949 D R+ RFRA G LP G+ +++ ++ + R+ P +++ +L Sbjct: 846 DIGRVQDRFRAEGVLPPALSGDRLYQSLLEDAARFVRSVQRLAPISLPLPALDFELPLGP 905 Query: 950 VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASG--GNGESRLFLRKDGEWR 1007 + ++G L ++ G L RP+ + + M+ W+ HLV C+ G L + +G +R Sbjct: 906 MILSGRLEGLRSSGQLFARPASMKARERMRSWIFHLVLCSLRPEGVDPETLLIMNNGAYR 965 Query: 1008 FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKA 1067 E L +L+E YR G PL PE+ +W + + L+ A Sbjct: 966 LR--QPEAPGLLLQELLERYRSGQRMPLAYFPETSFSW-------EGKLEKGEGDALKAA 1016 Query: 1068 RTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEA----IVEQSQRFLLPLFRFNQS 1122 R + + G RGEGDD ++R + + ++ A E + + P+ + +++ Sbjct: 1017 RGAWRTSGFGG--ARGEGDDPAFRRCFGEAGFDSEAAGPLYFRELAAALVRPVLQHSEA 1073 >UniRef50_P44945 Exodeoxyribonuclease V gamma chain n=21 Tax=Haemophilus influenzae RepID=EX5C_HAEIN Length = 1121 Score = 767 bits (1979), Expect = 0.0, Method: Composition-based stats. Identities = 395/1170 (33%), Positives = 616/1170 (52%), Gaps = 102/1170 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M VY+SN+L+ + ++ + + +DPF+ ++ILVQS MAQWLQ+ L+++ GI+AN+ Sbjct: 1 MFIVYYSNQLEKQKEILSSLFKSLPPEDPFQQDIILVQSPNMAQWLQIELAKETGISANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLT--DD 118 FP+PASFIW ++ + LP E+ F+K SM W+LM L+P LE+E+F+ LR+YL+ Sbjct: 61 KFPMPASFIWQLYAQNLPATALENPFDKDSMMWRLMRLIPIFLEKENFSPLRNYLSSSPH 120 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA--------------- 163 S++ KL+QLSSK ADLFDQYLVYRP+W+ WE G + + Q Sbjct: 121 SEQYKLYQLSSKIADLFDQYLVYRPEWIFAWEKGEDEQITDQIQKQQPNLNATLFAQIQG 180 Query: 164 ---WQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 WQ LW+ALV HRA L+ +F+ L P LPSR+FI GI ALP Sbjct: 181 NTKWQGELWRALVVDVKSDVNEATHRAALHNQFLALLADKK-APKKLPSRIFIFGIPALP 239 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPA-YLAKLLTRQRRHSFEDRELPLFRD 279 YL LQA+ ++IHL F NPC+ YWGDI D + R + + ++ + D Sbjct: 240 TAYLNILQAISSEVDIHLFFNNPCQEYWGDISDLRLDYLRSRQRYQFNKQDENQPLFSED 299 Query: 280 SENAGQLFNSD-----GEQDVGNPLLASWGKLGRDYIYLLSDLESS---QELDAFVDVTP 331 + + D +GNPLLA+WGK+GRD++Y+L E ++A+ ++ Sbjct: 300 QLSQLENAQFDVTYQKENLQLGNPLLAAWGKMGRDFLYILVRDEEHIPTYPVNAYQEIES 359 Query: 332 DNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHD 391 ++LL +QS IL LEN + D ++T H CHS REVEVLHD Sbjct: 360 NSLLGQLQSQILHLEN---------------KPLNIAKNDRTLTLHSCHSAMREVEVLHD 404 Query: 392 RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS-APADRYLPYAISDRRARQSHPV 450 LL + +DP+LTP+D++VMVADI+ Y+P+IQAVFG +P+++SD + +S + Sbjct: 405 YLLDLFNQDPSLTPKDVVVMVADINQYTPYIQAVFGQKNGDVPQIPFSLSDNKLSESDVL 464 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 + ++++LL L +S F +EDVL LLD+P + RF+I+ L +R+WV +SGIR+G+ + Sbjct: 465 VSSYLTLLRLKESNFSAEDVLVLLDIPAMRERFNISLADLPLVREWVTDSGIRFGLQKNQ 524 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 ++W+ GL RM+LGYAM QG WQ L + S GL EL G+L+ Sbjct: 525 ------DGINFNSWQAGLERMILGYAMREEQGIWQDSLGLNSSYGLKGELAGNLSHFFTA 578 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 L+ L Q +E+W + +L+ FF+ + +T + I+++ + + + Sbjct: 579 LSALHETLQQAHSIEKWQEILTALLSDFFVRNEDTSDMIFYIQEKINELAEHLKTLHFNE 638 Query: 631 AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 + ++ D + +L+ S +FLAG VN CTL+PMRS+PFKVVCLLGMND YPR Sbjct: 639 ELQAEVIADVITMQLEDAPNSLKFLAGKVNFCTLLPMRSVPFKVVCLLGMNDADYPRTQT 698 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 P FDLM ++GDR RRDDDRYLFLEAL++A+ YISY+GRSI DN + PSVLV + Sbjct: 699 PNSFDLMQYHYQKGDRVRRDDDRYLFLEALLAARDYCYISYVGRSITDNQPKEPSVLVSQ 758 Query: 751 LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ--SYAREWLP 808 L+DYI Q H F P N++ E+ S+A +WLP Sbjct: 759 LLDYINQGQKENVLT---------------VIEHPMTAFSPDNFKNNEKFTRSFATKWLP 803 Query: 809 AAS---QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 A + + E V L+ L F +PV+ FF+ +L V FR +D I Sbjct: 804 IAQFDASSNNSEFAVTMTENLEKIEEVELDALVSFVENPVKFFFEKQLGVYFRDKDERIA 863 Query: 866 DTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 D+E F L GL Y +N L+ +++ + FR+ G LP FG+++ E + Sbjct: 864 DSENFTLSGLDNYSLNNDLI--YLDEQNFADYFRQAEVKGVLPRAEFGKVYAENIRDNVL 921 Query: 926 QLADRVIACRQPGQS-MEIDLACN------GVQITGWLPQVQPDGL--LRWRPSLLSVAQ 976 + ++ + + ++ +L+ + +++ G++ + D + W + Sbjct: 922 EFKKKIADLGEAKHASVDFNLSVDWQNENQKIRLFGYMDALFGDDSQVIHWHFAKYKDRY 981 Query: 977 GMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLL 1036 ++ W+ +L+ C + N + +D PP+ E AL L ++ Y + L Sbjct: 982 CIRPWIYYLIQCVTQENAVPAKLITQDKVLELPPIEREVALAQLQIYVKDYLQSQIEIQL 1041 Query: 1037 VLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ 1096 V T + + + D++S +K + E N G D ++ R+ Q Sbjct: 1042 VP---------TVRNISDFIVSDENSVSEK----LQELTESNGF--GPKADPYWSRVLAQ 1086 Query: 1097 LT----PETMEAIVEQSQRFLLPLFRFNQS 1122 + PE + +++Q++ + LF ++ Sbjct: 1087 TSRFKQPENIAKLLKQTKAWFGLLFAQKKT 1116 >UniRef50_Q7NQR0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Chromobacterium group RepID=Q7NQR0_CHRVO Length = 1065 Score = 754 bits (1946), Expect = 0.0, Method: Composition-based stats. Identities = 381/1131 (33%), Positives = 570/1131 (50%), Gaps = 80/1131 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +Y SNRL+ L L + + L DPF E ++VQS GM +W+ + +++K GIAANI Sbjct: 1 MLFLYQSNRLEQLGELFCGMTQAMPLADPFAAETVIVQSRGMGRWITLDVARKAGIAANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DF LPA+F W + +V+P++P++SAF + ++W+L+ LLP L F + HYL Sbjct: 61 DFALPAAFAWRLMQKVMPDLPRKSAFVPEVLAWRLLALLPSLSGEP-FGPVLHYLEGG-- 117 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + F+L+ K AD+FDQYLV+RPDW+ WE G L+ GLGE +AWQA LW+ L E Sbjct: 118 EAAAFELAGKIADIFDQYLVFRPDWIRAWEAGELL-GLGEDEAWQASLWRRLAE-----S 171 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 P HR + +F L+ P LP RV + GI++L P+YL ++ L + ++ L Sbjct: 172 DPGRHRVRMLDQFFADLK-----PEHLPPRVTLFGIASLAPMYLALVKRLSQLTDVCLFT 226 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NPC YWGDI D L KL D G+PLL Sbjct: 227 LNPCEAYWGDIVDARRLLKLRQAG-------------------------DLFATQGHPLL 261 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 +S GK GRD+ L+++ F D LL +Q DIL+L + + Sbjct: 262 SSLGKQGRDFFELIAEDAELDAKPLFAAPKGDGLLARLQRDILQLNDPSQL--------- 312 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 RP DP D+SI H CH P RE+E L DRLLAM DP L+P D+ V+ DI++Y+P Sbjct: 313 ---PRPFDPADASIEVHACHGPMRELEALKDRLLAMFAADPKLSPADVAVLTPDINAYAP 369 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +I AVFG +PY+I+DRR + P+L F ++L L DSRF +++VLAL D P L Sbjct: 370 YIDAVFGRRDDAPNIPYSIADRRVEREQPLLSTFAAVLKLADSRFAADEVLALFDCPALL 429 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME-- 538 ARFD+ + L +++ WV ++GIRWG D + L LPA +TWR+GL R+LLG + Sbjct: 430 ARFDLADADLAFIQDWVRDAGIRWGRDAAHKASLGLPAEAAYTWRWGLDRLLLGTVLPPA 489 Query: 539 ---SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 G + +LPY + G + E + A L+ +Q ++W Sbjct: 490 LAGDDAGLFAGLLPYTAAQGQLGETLARFAGFYDALDALADAWSQPAAPQQWAQRFHQAC 549 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 + FL + + EAA+ L+ + + A +G V L++ RD L ++L +Q FL Sbjct: 550 DRLFLAEGDDEAALELLREALAELAENADLAGFGQPVGLAVARDWLLRKLSSSS-AQGFL 608 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 +G V C ++PMRSIPF+ +CL+GMNDG YPR P+ FDL+++ P+RGDRSRR DDRYL Sbjct: 609 SGGVTFCAMVPMRSIPFQALCLIGMNDGAYPRDERPVSFDLVARNPRRGDRSRRFDDRYL 668 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 FLEA++SA+ +LY+SY+G+S + PS LV EL+D + Sbjct: 669 FLEAILSARGRLYLSYVGQSARSGEPLPPSPLVSELLDTLSAMC-------------GED 715 Query: 776 VKAHLTCLHTRMPFDPQNYQPG--ERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET-V 832 + A LT H PF P+ + G S+ + A + + FV PLP T V Sbjct: 716 MAARLTLRHPLQPFSPKAFDGGDARLASFEPAFAAALAAPPAEPAPFVAPLPDEGAATVV 775 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD 892 L RFW +P RA+ RL + P EPF + + + + +QL+ A++ Sbjct: 776 NLHDFIRFWQNPARAWLADRLALRVAYSGDAQPAREPFAMARDASHALRRQLVEAMLHGK 835 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV--IACRQPGQSMEIDLACNGV 950 + + +R AAG LP G G+ + + + + +LA R+ + + L G Sbjct: 836 PPQPVRQRVAAAGLLPCGELGQAWLQEEGRASVRLAGRLPGALRGEALPPQPVHLEIAGF 895 Query: 951 QITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPP 1010 + G L ++P+G L + ++ AQ + LWL HL+ CAS G + D Sbjct: 896 TLVGELYGLRPEGRLDFIVGKMNAAQRVALWLSHLILCASRPAGIAPHSACYDDAGSTLL 955 Query: 1011 LAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTK 1070 A L + +++G + PL + A+ + + D L A K Sbjct: 956 HDEIDAAGLLVPWLARWKQGQAQPLPFFGRTSWAYAEALAKNPD----KPDKALAAAWQK 1011 Query: 1071 FLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 + + V + D+ +R +P + ++ LLPL Q Sbjct: 1012 WEPNFILGDGVA-QKDEPAIALAFRHQSPLEDPLFAQLAETLLLPLAERLQ 1061 >UniRef50_Q2SQD5 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQD5_HAHCH Length = 1073 Score = 743 bits (1919), Expect = 0.0, Method: Composition-based stats. Identities = 347/1139 (30%), Positives = 562/1139 (49%), Gaps = 85/1139 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML++Y+SNR + + +P + ++++VQS GM++WL L++ G+AAN+ Sbjct: 1 MLKIYYSNRQEQ-LLALLADALARPKANPLQSDILIVQSQGMSRWLSQQLAEINGVAANL 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLT---- 116 +F LPA IW + ++P+ F+K ++W+LM L P L + +F L YL Sbjct: 60 EFQLPAQLIWRLARLCRDDLPELHPFDKSILTWRLMQLAPGLPDSGEFDALHRYLHTGPD 119 Query: 117 -DDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEY 175 D + +QLS + AD+FD YL+YRPDWL++WE G E AWQ LW+ L Sbjct: 120 RKSPDLLRNYQLSQRIADVFDHYLMYRPDWLSEWEQGLPTEAGASEHAWQIELWRGLTHD 179 Query: 176 THQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIE 235 + HRA + Q L LP R+F+ G+ + P YL LQ +HIE Sbjct: 180 SDAP-----HRARVLQELAAQL---PQHVDKLPPRLFVFGVPYMAPAYLDVLQNAARHIE 231 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 +H+ NP +YWGDI ++++ TR G D Sbjct: 232 VHMYQWNPTEHYWGDIASRKDISRIRTR---------------------DGAEVSGLYDE 270 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 G+ LLASWGK RDY+ +L D+ ++ P LL +Q+D+ L Sbjct: 271 GHRLLASWGKPLRDYLDVLQDVSVTEADCYVPPAPPQTLLQRLQADVFNLR--------- 321 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 + D S+ H+CHS REVE L+D+L+ +L+ D +L+PRDI+VM DI Sbjct: 322 -----QEPWPESPADDRSLQVHLCHSALREVEALYDQLMDLLQTDHSLSPRDIVVMTPDI 376 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 + Y+P ++AVFG+ R +P++++D ++++ + L L RF + +VL LL+ Sbjct: 377 EQYAPLVEAVFGAQQGARRIPWSLADLSRYSDFNLVQSVLQLFDLLPGRFTASEVLGLLE 436 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 +P + RF + EE L LRQW++E+ IRWG+D ++ + + Q +W+ G+ R+LLG+ Sbjct: 437 IPAVGRRFGLDEELLSRLRQWLHEASIRWGLDAESQQAYGVDCADQFSWKAGIKRLLLGF 496 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 A+ A +Q V PY G A+ +G L+ L+ L WR +++ + ++W + + Sbjct: 497 ALPDAMQMYQDVAPYPHIQGGDADSLGALSQLIDTLARWRAQISRGQTPQQWADLLHSWM 556 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 N F PD + E A+ + + Q + E A + +PL++++ +L +RLD Q FL Sbjct: 557 NDLFDPDRDEEQALQVAREAVQEWLQETQTAGFDQPLPLAVVKQDLRRRLDSPLRRQSFL 616 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 G V C ++PMRSIPF+VV +LG+N +PR GFDL+++ P++GDR+RR++DR+L Sbjct: 617 TGAVTFCAMVPMRSIPFRVVAVLGLNHDQFPRHQTQPGFDLIAEYPRKGDRARREEDRFL 676 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 FLEAL++A+ Y+SY+GRSI+DNSE PSV++ EL+D I ++ Sbjct: 677 FLEALLAARDVFYLSYVGRSIRDNSECAPSVILSELLDTIQ-------------EQGGEA 723 Query: 776 VKAHLTCLHTRMPFDPQNY-QPGERQSYAREWLPAA---SQAGKAHSEFVQPLPFTLPET 831 + H PF P + G SY EWLPA + + + LP E Sbjct: 724 AIRRILREHPLQPFSPHYFTADGGHFSYQSEWLPALHGRHSKQEYQAFCPESLPPREREP 783 Query: 832 VP------LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL 885 L++L+RF +P R F Q RL + D EPF L GL +Q+ + L Sbjct: 784 FSTDHPVELDSLRRFLRNPTRYFVQQRLNI-LLDASDLAQDREPFDLAGLHGFQVKELWL 842 Query: 886 NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL 945 L+ E A G LP GA G I + Q+++ L ++ +EI Sbjct: 843 QELMNAATDEEAESYLEAKGLLPGGAVGAISRKQTRQQLEALREQARELYGK-DRIEITP 901 Query: 946 ACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYC--ASGGNGESRLFLRKD 1003 +G+ + G + + P GLL + S ++ + LWLEHL C + + + Sbjct: 902 EKSGLPLRGAVAGIGPRGLLHLTTAGCSASRMLLLWLEHLALCGVTADALARPSFLVCRQ 961 Query: 1004 GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDST 1063 G + P+A QA L++L++ + + P+ P++ +++T + ++ + Sbjct: 962 GVGHYRPVAQNQARQLLAELMDLLTQSENEPVRFFPKTSLKYVETKNNPRSRSEPI---- 1017 Query: 1064 LQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS 1122 L + GN GE D + +WR E V ++ P ++ Sbjct: 1018 -----NAALNCWLGNEWQPGELADAHHFLVWRFEAETLNERFVALAESIWEPALEHWEA 1071 >UniRef50_A1TWK1 DNA helicase/exodeoxyribonuclease V, gamma subunit n=2 Tax=Marinobacter RepID=A1TWK1_MARAV Length = 1197 Score = 743 bits (1919), Expect = 0.0, Method: Composition-based stats. Identities = 391/1216 (32%), Positives = 579/1216 (47%), Gaps = 137/1216 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-------- 53 H+N L+ L + +I + + P + E LVQS G+AQWL++ L++K Sbjct: 11 FHAIHANHLEDLRRAVVYICRQNPMP-PLQSETFLVQSNGIAQWLKLALAEKRTEDGVEG 69 Query: 54 -FGIAANIDFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLERED-FT 109 GIAA +DF PA FIW + VLP+ +P++S F+K+ + W+L LLP+L+ +++ FT Sbjct: 70 GLGIAAGMDFLFPARFIWQAYRAVLPDGEVPEQSPFDKRRLVWRLYRLLPELVGQDEAFT 129 Query: 110 LLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEA 161 L +L + FQL+ K ADLFDQY V+R DWLA WE G V + L Sbjct: 130 PLARFLDGRDTDLRNFQLAEKVADLFDQYQVFRADWLAAWEQGKDVVITARGEEKALDTE 189 Query: 162 QAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCP--PGLPSRVFICGISAL 219 WQ LW+ LVE + R+ ++ RF+ + + LP R+ + G+S+L Sbjct: 190 ACWQPLLWRKLVEDVGS--EAHTSRSQIHTRFMAQGQHISEPANASRLPKRIVVFGVSSL 247 Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 P L+AL L + ++ L NPC++YW DI L K ++ Sbjct: 248 PRQALEALYVLSRFSQVVLCVHNPCQFYWADIISDRELLKAERKRGAAHPV--------- 298 Query: 280 SENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE-----------LDAFVD 328 Q+ + D NPLLA+WGK GRDYI LL + ++ + +D F D Sbjct: 299 ---LSQIDDPDQLHQHANPLLAAWGKQGRDYIRLLDEFDNPDDYRASFQTPGQKIDIFTD 355 Query: 329 ---VTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQRE 385 V LLH +Q+DI L R + D S+ FH H PQRE Sbjct: 356 HGDVDNPCLLHQLQNDIHNLTPLQE--------IRQQQRTVDLTRDHSVVFHDAHGPQRE 407 Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA--PADRYLPYAISDRR 443 VE+LHD+LLA DPTL PRD+IVMV DI+ Y+P IQAVFG R++P+ ISD+ Sbjct: 408 VEILHDQLLAAFNADPTLRPRDVIVMVPDINVYAPHIQAVFGRYSPGRKRHIPFTISDQG 467 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 R PVL A +L+SLP SRF ++++LL+V + RFDI+E+ + R+WV + IR Sbjct: 468 QRHHEPVLIALETLMSLPRSRFGVSEIISLLEVAGIRDRFDISEDDIPLARRWVEGANIR 527 Query: 504 WGIDDDNVRELELPAT-GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 WG+ + L+LPA ++TW+ GL MLLGY M W V PY E GL A L G Sbjct: 528 WGLHGKHRESLDLPAELERNTWQAGLRAMLLGYGMGD-DQPWGGVEPYGEIGGLQASLAG 586 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF-LPDAETEAAMTLIEQQWQAIIA 621 L + QL + L R EW + ML FF + + + +Q + + Sbjct: 587 RLGEFVHQLEALWQALQATRTPGEWEALFSAMLEQFFHKVEGQDLLLLNRFRRQLEQWLD 646 Query: 622 EGLGAQYGD-AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 + L A +PL++++D L Q LD+ ++QRFLAG VN TLMPMR+IPF+ VCLLGM Sbjct: 647 DALAAGLEQQPLPLNIVKDVLLQGLDEGGLNQRFLAGKVNFATLMPMRAIPFRKVCLLGM 706 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 NDG YPR P+ FDLM+Q + GDRSRR+DDRYLFLEAL+SA+++LYIS++GRSI+D+S Sbjct: 707 NDGDYPRSRPPVDFDLMAQDYRPGDRSRREDDRYLFLEALLSAREQLYISWVGRSIRDDS 766 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY------ 794 ER PSVL+ +L D++ + G + V LT H PF + Sbjct: 767 ERPPSVLISQLQDHLNSLWKVAGQPDGS-------VTKALTTQHPLQPFSRDYFPRTNGV 819 Query: 795 ---------------QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQR 839 Q +Y REW A + S P T E + L L Sbjct: 820 GDGEETQPKPLADVLQARGLFTYEREWRSAHAVDNPEQSREALPY-QTPEEPISLTELAN 878 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER--- 896 F P+ F+Q RLQV F + + D E F L GL R++++ +L++ V + +E Sbjct: 879 FLKKPIDTFYQRRLQVRFEAVEEDDTDNENFDLNGLDRWRLDNELIHEGVVKAASEEELH 938 Query: 897 -----LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ-----SMEIDL- 945 R GDL G + L R + + Sbjct: 939 ERLEATLDRMARRGDLGMGVTEHRLRTELAGRLPDLFQRYRGALAEWPEAVAEPLPFEFR 998 Query: 946 ---ACNGVQITGWLPQVQPDGLLRWR---------------PSLLSVAQGMQLWLEHLVY 987 + V++ + ++ + + + A ++ WL HL Sbjct: 999 YSDSTGAVEVADLIDNLRCNPAGQLCRLVIASSGLLTGSGYSKKVRYANLLRDWLVHLAG 1058 Query: 988 CASGGNGESRLFLRKDGE-WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWL 1046 SG E+ + +++G +RFP +A EQA + ++ + E + L + E+G AW+ Sbjct: 1059 QLSGQPFETVILGKEEGRKFRFPVMAPEQAQKHFEAILGRWMEATTRTLPIHCEAGFAWI 1118 Query: 1047 KTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETME-AI 1105 + Y + ++A ++ QAY + D + + Sbjct: 1119 TSFYGGKKSVG-----DHERAISEAEQAY----STALDRDTGYLLGAFESPEALMASGEF 1169 Query: 1106 VEQSQRFLLPLFRFNQ 1121 + +PL+ Q Sbjct: 1170 EALLHQLYVPLWEAEQ 1185 >UniRef50_C0QI08 RecC n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QI08_DESAH Length = 1206 Score = 739 bits (1908), Expect = 0.0, Method: Composition-based stats. Identities = 377/1225 (30%), Positives = 574/1225 (46%), Gaps = 142/1225 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK--FGIAAN 59 L + H+N L+ L + V L E E +VQS GMAQWL++ ++ GI+A Sbjct: 16 LSIIHANHLEDLRDVAVHWVRTHPLG-VLETEQFIVQSKGMAQWLKLAVAADDGCGISAG 74 Query: 60 IDFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD 117 I+ LP +++W + +L IP +S ++++ + W+ ++LP LL + F+ L +L + Sbjct: 75 IETQLPGTWVWTAYRAILGNDTIPTDSPYDRERLVWRFFSILPTLLTDDIFSPLNRFLEN 134 Query: 118 DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEAQAWQAPLW 169 D+D+R+ +QL+ + ADLFDQY VYR DWL QW + AWQA LW Sbjct: 135 DTDQRRQYQLACRLADLFDQYQVYRADWLKQWAGEKDQLLTGGGQWVDIPPQHAWQAELW 194 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 + L R++L+Q F++ P LP RV + GIS+LP L+ L A Sbjct: 195 RRLRARV-PASLRNIGRSDLHQAFLQKASDTRVRPEILPPRVIVFGISSLPKQVLETLYA 253 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 + ++ L NPCR++W DI + L ++ + + Sbjct: 254 VSHLCQVLLFVNNPCRHFWADIIEDRELLRIDHARHSGKATMPTPL------------DP 301 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ-------ELDAFVD----VTPDNLLHNI 338 NPLLA+WGK GRDYI L+ ++ + E+D F D T LLH I Sbjct: 302 VDVYRHANPLLAAWGKQGRDYIGLVYGYDTPETYRKNFAEIDLFRDVIAQDTRGTLLHEI 361 Query: 339 QSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 Q IL+LE A ++++RP+ D +ITF V HS QREVE+L D+LL E Sbjct: 362 QQAILDLEPSAP---------DNESRRPIARGDRTITFQVAHSRQREVEILQDQLLHSFE 412 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSA--PADRYLPYAISDRRARQSHPVLEAFIS 456 L PRD++VM DI+ Y+P I+AVFG+ R++P+ I+D ++S P+++A Sbjct: 413 TLDNLLPRDVVVMTPDIEGYAPHIEAVFGNLSLDDPRFIPFTIADHPGKKSVPLVKALER 472 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 LL LPD R + D++ LL+VP RF E L L QW+ +GI WG++ L Sbjct: 473 LLHLPDLRMAARDLMDLLEVPAFQRRFGFKETDLPRLFQWIKGAGISWGLNKSQRASFGL 532 Query: 517 PAT-GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 P Q TW FGL RMLLGYA+ + + W ++ PYDE GL A LVG +A ++ +L Sbjct: 533 PPDLDQTTWAFGLNRMLLGYAVGNNKA-WHNIEPYDEIGGLEAHLVGLVAGVVERLEALW 591 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEA-AMTLIEQQWQAIIAEGLGAQYGDAVPL 634 L E W + R + FF P +E + ++Q + A + L Sbjct: 592 TTLQSSACPERWCLILRTLARDFFEPVDASERLVLNRMDQVLDDWLNACTQADLDQELTL 651 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 ++RD +++ + +SQ+FLAG VN TLMPMR+IPFKVVCLLGMNDG +PR PL F Sbjct: 652 CVVRDYFLEKMAVQGVSQKFLAGMVNFGTLMPMRAIPFKVVCLLGMNDGAFPRSHPPLDF 711 Query: 695 DLMSQ--KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 DLM++ + GDRS R+DDRYLFLEAL+SA++ Y+S++GR ++DN ER PSVLV +L Sbjct: 712 DLMAEPGMYRPGDRSTREDDRYLFLEALLSARETFYLSHVGRDVRDNGERTPSVLVGQLR 771 Query: 753 DYIGQSHYLPG----------------------DEALNCDESEARVKAHLTCLHTRMPFD 790 DYI L E+ + + + HLT +H PF Sbjct: 772 DYIDAGWTLEPGCAEPERPESECSEPERLGSECPESGQPNYEGSGLLDHLTTIHPLQPFG 831 Query: 791 PQNYQPGE--RQSYAREWLP-AASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRA 847 + E +YA+EW + + EF++ P T+ L F +PV+ Sbjct: 832 RAYFSSPEAPLFTYAQEWRNCLGRREDQPREEFLETPPCVDALTLSP--LIGFMKNPVKF 889 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF--------- 898 F+ L + F E D EPF L+ L+ + + LL+A + + L+ Sbjct: 890 FYNHCLSIRFDDISLENLDHEPFALDLLAPFNLGATLLSAGLAAGVSPELYPGRGGPCVV 949 Query: 899 --------RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ----SMEIDLA 946 R G+LP FG + + + + R + + MEI L Sbjct: 950 EAAVVEAADRLTRTGELPMAGFGTLAAKNLTAPVIAMLTRYGSLAERWPRACDPMEIALV 1009 Query: 947 CN-----GVQITGWLPQV--------------------QPDGLLRWRPSLLSVAQGMQLW 981 +++ WL + P +L LL + + LW Sbjct: 1010 IEQDGWPEIRLDDWLDNMITTDFDDPGAILPQFARQQFYPRNILDKGGKLLLLYPLVPLW 1069 Query: 982 LEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPES 1041 + H+ CA G + + D F PL A L ++ +R+G++ PL V ++ Sbjct: 1070 ISHVAGCAMG-IDLTSHLIAPDAVAAFHPLDKAAAFSVLMDILTVFRQGLARPLPVTAKT 1128 Query: 1042 GGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGN-MMVRGE-GDDIWYQRLWRQLTP 1099 G A++ Q+A+ + Y G+ RGE G D + QR + Sbjct: 1129 GVAYVAALMAKDE----------QRAKNDAARVYAGDGFNARGELGYDPYLQRTFPDFDA 1178 Query: 1100 ETMEA---IVEQSQRFLLPLFRFNQ 1121 + + LP+ + + Sbjct: 1179 LWQARDNFFKDLAATLYLPMVQAVE 1203 >UniRef50_D2BZV3 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Gammaproteobacteria RepID=D2BZV3_DICD5 Length = 1169 Score = 738 bits (1904), Expect = 0.0, Method: Composition-based stats. Identities = 407/1184 (34%), Positives = 582/1184 (49%), Gaps = 99/1184 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-----FGI 56 L HSN + L ++ + L E E+ILVQS G+ QWL++ L++ G+ Sbjct: 10 LMAIHSNHPEALRDVLVSWMAAHPLSG-LENELILVQSNGIGQWLKLALARDTHDGGCGV 68 Query: 57 AANIDFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHY 114 AA +D LP+ F W + VL +P+ S F+K + W+L+ LLP LL + +F L + Sbjct: 69 AAALDIQLPSRFFWQAYRAVLGREQVPETSPFDKPLLVWRLLRLLPDLLTQPEFAALARF 128 Query: 115 LTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEAQAWQA 166 L D+D RK +QL+ + ADLFDQY VYR DWLA W G V E L E Q WQ Sbjct: 129 LRQDTDLRKHYQLAERLADLFDQYQVYRADWLADWSEGRDVLTSHRRGVEPLPEEQRWQP 188 Query: 167 PLWKALVEYTHQLGQPRWHRANLYQRFIETLESA--TTCPPGLPSRVFICGISALPPVYL 224 LW+AL+ T + RA L++RF++ ++ + P GLPSRV + GIS+L L Sbjct: 189 LLWRALLADTGE-ALSGTSRAALHRRFLDEVDRRGDSERPAGLPSRVVVFGISSLSQQAL 247 Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG 284 + L A+G+ ++ + NPC +YWG+I L + +++ E+ Sbjct: 248 ELLAAIGRWTQVFMCVHNPCEHYWGNIIADKDLLRAERARQQRKPGMPEVIAL------- 300 Query: 285 QLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ-----------ELDAFVDVTPDN 333 + +PLLA+WGK GRDYI LL + + + +D F D Sbjct: 301 -----EELHQHAHPLLAAWGKQGRDYIGLLDEYDQREQYESLLQPVISRIDLFNSNGEDC 355 Query: 334 LLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL 393 LLH +Q DI +L A + RS DSS+ FH+ HSPQREVEVLHD+L Sbjct: 356 LLHQLQDDIRDLRPLAES--------RSRWPAIDSDQDSSVRFHLAHSPQREVEVLHDQL 407 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA---DRYLPYAISDRRARQSHPV 450 LA DPTL P D+IVMV DI+SY+P IQAVFG RY+P++++DR ARQ++ V Sbjct: 408 LAAFAADPTLRPSDVIVMVPDINSYAPHIQAVFGLIDRQKDPRYIPFSVADRGARQNNLV 467 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 L A LL LP SR DVL LLDVP + RF I EE L L++W+ + +RWG+ Sbjct: 468 LAALEKLLHLPQSRVAVSDVLDLLDVPAVRQRFAIEEEQLPLLQRWIRAANVRWGLHARQ 527 Query: 511 VRELELP-ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 + L LP A Q++W FGL RMLLGYA+ + G W+ + P DE GL A L G LA LL Sbjct: 528 RQSLNLPDAPEQNSWFFGLRRMLLGYAVGAG-GAWRDIEPLDEIGGLDAALAGQLAWLLD 586 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA-AMTLIEQQWQAIIAEGLGAQY 628 +L+ + L Q +W R +L+ FF D + + +++ Q + Sbjct: 587 RLDYSWQQLCQPATPVQWCERLRVLLSTFFAADDGEDGFMLLQLDEGLQNWLEACESVAL 646 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 +PLS++R+ +Q ++Q F AG V TLMPMR+IPF+ VCLLGMNDG YPR Sbjct: 647 TQELPLSVVREHWLGLFEQTSLTQPFFAGAVTFATLMPMRAIPFRHVCLLGMNDGDYPRN 706 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 PL FDLM Q + GDRSRR+DDRYLFLEAL+SA+++LYIS++GRSI DNSER PSVLV Sbjct: 707 RVPLDFDLMGQDYRPGDRSRREDDRYLFLEALLSARERLYISWVGRSIHDNSERPPSVLV 766 Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG-ERQSYAREWL 807 +L D++ + V LT H PF P+ + G SYAREW Sbjct: 767 AQLRDHLSNGWRIVN---------GQDVLPALTVEHRLQPFSPEYFTAGSSLFSYAREWR 817 Query: 808 PAASQAGKAHSEFVQPLPFTLPE-----TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 A S+ L + + L L F PVR+FF++RL V F ED Sbjct: 818 AGLPSYDGASSQTAAASDAVLDDYVQDGVLTLRQLADFVRDPVRSFFRLRLNVWFEQEDP 877 Query: 863 EIPDTEPFILEGLSRYQINQQLLN--------ALVEQDDAERLFRRFRAAGDLPYGAFGE 914 D EPF ++ L +++ +L+ + + +R G+L G F Sbjct: 878 TSQDQEPFAIDALENWRLQHELIQVQKAALQRQIPREQALAEHLQRITRRGELAPGGFAT 937 Query: 915 IFWETQCQEMQQLADRVIACRQPG-----------QSMEIDLACNGVQITGWLPQVQ--- 960 + + + M L R R + ++ N +++ + + Sbjct: 938 VLEQDLAEPMADLFTRYEQERDKWPTPIPDEPLSLPELPLEDWLNELRLDEQGNRCRLVL 997 Query: 961 -PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHY 1019 GLL + + + W+ HL GG+ + K+G P L QA Y Sbjct: 998 ESGGLLHPTRRSYRLDKLLPFWVAHLAGH-LGGHALHSTLVSKNGTVHLPALEPAQAAAY 1056 Query: 1020 LSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNM 1079 L++ +REGM PL V ++G WL+ D + AR + + N Sbjct: 1057 WQSLMDAWREGMRCPLPVAVKTGFRWLE---VGGELGQSADGEAGKAARQCYEEHDPANR 1113 Query: 1080 MVRGEGDDIWYQRLWRQLTPETME-AIVEQSQRFLLPLFRFNQS 1122 + + R + + Q+ L PL ++ Sbjct: 1114 KYAESASNPYLARAFPTFEHLWADGEFARWVQQLLAPLHHTLKA 1157 >UniRef50_A4JS85 DNA helicase/exodeoxyribonuclease V, gamma subunit n=11 Tax=Proteobacteria RepID=A4JS85_BURVG Length = 1209 Score = 736 bits (1901), Expect = 0.0, Method: Composition-based stats. Identities = 385/1192 (32%), Positives = 554/1192 (46%), Gaps = 110/1192 (9%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-------- 53 L + H NR + L L+ ++ L P E E ILVQS G+AQWL++ L+ Sbjct: 9 LMLIHGNRSEQLRDLLVEWIKHYPLA-PLESETILVQSNGIAQWLKLALAADRDPATGEG 67 Query: 54 -FGIAANIDFPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQLLEREDFTL 110 GIAA +D LP+ F+W + VL + + S F+K + W+LM +LP L R F Sbjct: 68 GCGIAAALDVSLPSRFVWQAYRAVLGAESVAEVSPFDKSRLVWRLMRMLPALAARPAFEP 127 Query: 111 LRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEAQ 162 LR +++DD D+RK FQL+ + ADLFDQY +YR DWLA+W G V + L + Q Sbjct: 128 LRRFISDDDDRRKRFQLAERLADLFDQYQMYRADWLARWADGDAVVLDARGGEQPLPDEQ 187 Query: 163 AWQAPLWKALVEYTHQLGQPRW-----HRANLYQRFIETLE--SATTCPPGLPSRVFICG 215 WQA LW LV R RA +++ F+ + P G+P R+ I G Sbjct: 188 RWQAALWHELVADVAGSDASREISSRGGRAAVHEAFMRRIAAWDDDRGPVGIPRRIVIFG 247 Query: 216 ISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELP 275 IS+LP L+AL AL + ++ + NPC +YW DI L +++ Sbjct: 248 ISSLPHQLLEALAALARWSQVMMCVANPCAHYWADIVPDRDLLGRRQPRQQRRTGMPAEL 307 Query: 276 LFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESS--------------Q 321 D +PLLASWGK GRD+I LL +++ Q Sbjct: 308 DL------------DTLHLHAHPLLASWGKQGRDFIGLLDAFDNADAREHYGPKFARIGQ 355 Query: 322 ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHS 381 +D F LL +Q DI +L D SI FHV HS Sbjct: 356 RIDLFESRGASTLLQQLQDDIRDLRPLRETQETW--------PDVDPATDGSIRFHVAHS 407 Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA--DRYLPYAI 439 QREVE+LHD+LLA DP+L P+D++V+V DI++Y+P +QAVFG RY+P+++ Sbjct: 408 AQREVEILHDQLLAAFNADPSLRPQDVVVVVPDIEAYAPHVQAVFGLVDRSDPRYIPFSV 467 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 +DR R++ P++ A LL LP++R D+L LLDVP L RF I E L LR W+ Sbjct: 468 ADREQRKADPLIGALEMLLGLPNARLAVSDLLDLLDVPALRKRFGIDETDLPKLRAWIRG 527 Query: 500 SGIRWGIDDDNVRELELPATGQ----HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + IRWG+ L LP HTW FGL RMLLGYA+ S G W + P+DE G Sbjct: 528 ANIRWGLHAQQRASLGLPLDEHAAAPHTWAFGLRRMLLGYAVGSEAGAWHDIEPFDEVGG 587 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP-DAETEAAMTLIEQ 614 L A L+G L L+ L+ R LA+ +W R++ FF D+E + ++ Sbjct: 588 LDAALLGPLVRLIDALDHAWRSLAEPATAPDWCERLRNLKQTFFSAHDSEDAYTLARLDN 647 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 QA + A+ D +PLS++ D +LD+ +SQRF AG V TLMPMR+IPF+ Sbjct: 648 VLQAWLDACTEARLTDVLPLSVVSDHWLSQLDEGGLSQRFFAGAVTFATLMPMRAIPFRR 707 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 VCLLGMNDG YPR P+ FDLM + GDRSRR+DDRYL LEAL+SA+ L++S++GR Sbjct: 708 VCLLGMNDGDYPRARVPMDFDLMRLHYRPGDRSRREDDRYLLLEALLSARDHLHVSWVGR 767 Query: 735 SIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 SI DN R PSVL+ +L D++ L G D + LT H PF + Sbjct: 768 SITDNGVRPPSVLIGQLRDHLAAGWRLAGASGAGPD----ALVKALTVEHPLQPFSVAYF 823 Query: 795 QPG-----ERQSYAREWLPAASQAGKAHSEFVQPLPFT-LPETVPLETLQRFWAHPVRAF 848 P +YA EW +P + + L L F A PV+ F Sbjct: 824 PPDTNDAAAVFTYAAEWRDEPRACRDPAPPAATHVPAIVRDDPLSLRELAEFLAKPVKTF 883 Query: 849 FQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL--------NALVEQDDAERLFRR 900 F RL+V +++ + D EPF L+ L +++ +L+ + + Sbjct: 884 FSQRLRVALDVDETAVDDEEPFELDSLDAWKLQDELIGVQAAHMHDDDALVAARDARMAA 943 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ-------SMEIDLACNGVQ-- 951 R GD+ G FG++ + M +L + +A Sbjct: 944 IRRRGDVVPGGFGDLASAALLEPMDELFAAYRKQLARWPVAIDGECEVAFQIAGESRVPG 1003 Query: 952 ITGWLPQVQPDGLLR-----------WRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFL 1000 ++ WL Q + D R + + W+ HL +G + + + + Sbjct: 1004 LSDWLGQWREDSEGRRARLVLETSALVEKGAYRYHKLVGHWVRHLAANLAGRH-VTTVIV 1062 Query: 1001 RKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDD 1060 K G PLA +L+ L++ + GM PL V ES AWL + + Sbjct: 1063 SKKGIVELRPLAGGDTEAHLTALLQVWDAGMREPLPVAVESAFAWLVRRFGKDGNGA-AP 1121 Query: 1061 DSTLQKARTKFLQAYEGNMMVRGEGD-DIWYQRLWRQLTPETME-AIVEQSQ 1110 + T A Y G+ +GE R + + ++ Sbjct: 1122 EDTRAAAEKAARSKYAGDAYNKGEVAKSASLGRAFPDFDALCADGRFEALAE 1173 >UniRef50_A3JIN1 Exodeoxyribonuclease V gamma chain n=2 Tax=cellular organisms RepID=A3JIN1_9ALTE Length = 1224 Score = 733 bits (1892), Expect = 0.0, Method: Composition-based stats. Identities = 386/1230 (31%), Positives = 569/1230 (46%), Gaps = 144/1230 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-------- 53 H+N L+ L + FI ++ L P + E LVQS G+AQWL++ L++K Sbjct: 19 FHAIHANHLEDLRRAVVFICQQNPLP-PLQSETFLVQSNGIAQWLKLALAEKRSENGSEG 77 Query: 54 -FGIAANIDFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQL-LEREDFT 109 GIAA +DF PA FIW + VLP+ +P++S F+K+ + W+L LLP+L L E F Sbjct: 78 GLGIAAGMDFLFPARFIWQAYRAVLPDGDVPEQSPFDKRRLVWRLYRLLPELVLTDEAFN 137 Query: 110 LLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEA 161 L +L + FQL+ K ADLFDQY V+R DWLA WE G V + + + Sbjct: 138 PLARFLDGSDTDLRAFQLAEKVADLFDQYQVFRADWLAAWEQGRDVVISTRNGEKPIEQD 197 Query: 162 QAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTC--PPGLPSRVFICGISAL 219 WQ LW+ LVE T + R+ ++ RF++ + P LP R+ + G+S+L Sbjct: 198 TRWQPMLWRKLVEDTG--AEAHTSRSQIHTRFMKQGQQVAAPSHPSRLPKRIVVFGVSSL 255 Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 P L+AL L + ++ L NP ++YW DI L K ++ Sbjct: 256 PRQALEALYVLSRFSQVVLCVHNPSQFYWADIVSDRELLKAERKRGASH----------- 304 Query: 280 SENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE-----------LDAFVD 328 Q+ ++D NPLLA+WGK GRDYI LL + ++ E +D F + Sbjct: 305 -PTLSQIDDADQLHQHANPLLAAWGKQGRDYIRLLDEFDNPDEYRNSFQTPDQKIDIFSE 363 Query: 329 V---TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRP------------------- 366 LLH +Q+DI L + S Sbjct: 364 HGAGQTTCLLHQLQNDIYNLTPLQEIRDEQRKLDLSQGHPLTAEGSLSAEGSLSAEGSLP 423 Query: 367 ---------LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 D S+ FH HSPQREVE+LHD+LLA D TL PRDI+VMV DI+ Sbjct: 424 AEGSLSSEGFPKADGSVAFHNAHSPQREVEILHDQLLAAFNADDTLRPRDIMVMVPDINV 483 Query: 418 YSPFIQAVFGSA--PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 Y+P IQAVFG R++P+ ISD+ R PVL A +L+SLP RF ++++LL+ Sbjct: 484 YAPHIQAVFGRYTAGRKRHIPFTISDQGQRNHEPVLIALETLMSLPRHRFGVSEIISLLE 543 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT-GQHTWRFGLTRMLLG 534 VP + RF+I EE + R+WV + IRWG+ + LELPA ++TW+ GL MLLG Sbjct: 544 VPGIRDRFEIAEEEIPLARRWVEGANIRWGLHGAHRESLELPADLDRNTWQSGLRSMLLG 603 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 Y M W V PY E GL A L G L + +L + L R +EW + M Sbjct: 604 YGMGD-DEPWAGVQPYGEIGGLQASLAGRLGDFVYRLEKVWQDLQASRTPQEWEALFAAM 662 Query: 595 LNAFF-LPDAETEAAMTLIEQQWQAIIAEGLGAQYG-DAVPLSLLRDELAQRLDQERISQ 652 L FF + + +Q + + + L A +PL++++D L LD+ ++Q Sbjct: 663 LEQFFHKVEGHDLLLLNRFRRQLEQWLDDTLAAGLEHQLLPLNIVKDVLLDGLDEGGLNQ 722 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 RFLAG VN TLMPMR+IPF+ VCLLGMNDG YPR P+ FDLM+Q + GDRSRR+DD Sbjct: 723 RFLAGKVNFATLMPMRAIPFRTVCLLGMNDGDYPRSRPPVDFDLMAQDYRPGDRSRREDD 782 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 RYLFLEA++SA+++LYIS++GRSI+D+S R PSVLV +L D++ LPG + Sbjct: 783 RYLFLEAMLSAREQLYISWVGRSIRDDSPRPPSVLVGQLQDHLNGLWQLPGQPDV----- 837 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGE----RQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 V LT H PF + +Y EW A Sbjct: 838 --AVTDALTTCHPLQPFSRDYFPQSRHARSLFTYEHEWRRAHGTVSTDAQHKALAY-QQP 894 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 E V L L F P+ F+Q RLQV F + + DTE F L GL R++++ +L+ Sbjct: 895 EEPVTLNDLSGFLKKPIDTFYQRRLQVRFEDVEDDDTDTENFDLNGLDRWRLDTELIEQG 954 Query: 889 VEQDDAERLFRR--------FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ- 939 + + +E GDL G + L +R + Sbjct: 955 LLKASSEEDLEHRLETTLDCMARRGDLGMGTTEHRLRNELSGRLPNLFERYQSALAEWPE 1014 Query: 940 ----SMEIDLAC----NGVQITGWLPQVQPDGLLRWR---------------PSLLSVAQ 976 + + V++ + ++ + + A Sbjct: 1015 EVGEPLAFEYRLANSTGSVEVLDLIDHLRRNHEGNICRLVIAGSSLLTGSGNTKKIRYAN 1074 Query: 977 GMQLWLEHLVYCASGGNGESRLFLRKDGE-WRFPPLAAEQALHYLSQLIEGYREGMSAPL 1035 M+ W+ HL + E+ + +++ RF PLA E A +L ++ + + + L Sbjct: 1075 LMRDWVIHLAGQIAAQPFETLILGKEEKRNVRFAPLAKETASKHLDAILARWMDANTRAL 1134 Query: 1036 LVLPESGGAWLKTCYDAQNDAMLDDDS--TLQKARTKFLQAYEGNMMVRGEGDDIWYQRL 1093 V E+G AW+ + Y ++ + + ++A T L E D + + Sbjct: 1135 PVHCEAGFAWIYSFYQSKKFLGEHEHAISDAEQAYTLAL-----------ERDTGYLRGA 1183 Query: 1094 WRQLTPETME-AIVEQSQRFLLPLFRFNQS 1122 + + +PL+ Q+ Sbjct: 1184 FESAELLLESGEFEALLHQLYVPLWEAEQN 1213 >UniRef50_A6VQ90 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VQ90_ACTSZ Length = 1113 Score = 732 bits (1890), Expect = 0.0, Method: Composition-based stats. Identities = 413/1164 (35%), Positives = 607/1164 (52%), Gaps = 101/1164 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 +YHSN LDV ++ ++++ DPF+ E ILVQS GMAQWLQ+ +++ GIAAN+ Sbjct: 5 FFIYHSNDLDVQAGILISLLQQRS-TDPFQSETILVQSPGMAQWLQLKIAEADGIAANLR 63 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD--S 119 FP+PASFIW + LP++ ++S F K++M+W LM LL L L Y D Sbjct: 64 FPMPASFIWQQYADNLPDVSEQSPFGKEAMTWHLMALLAILP----LPRLNEYWRDHALG 119 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL-----------------VEGLGEAQ 162 ++ K +QL+ + ADLFDQYLVYRPDW+ WE G + + + Sbjct: 120 NQEKRYQLARQIADLFDQYLVYRPDWIDAWEKGDDRYIENQLRYALADNPVLLAQIKQDI 179 Query: 163 AWQAPLWKALVEYT--HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 WQ LW+ LV H P HR NL+ ++ TL + P LP R+F+ GISALP Sbjct: 180 RWQGQLWRELVAAVCRHTKDSPARHRVNLHLTYLNTLATG--RPKNLPPRIFVFGISALP 237 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 YL+ LQA+ +H ++HL F NP ++YWGD+ DP ++ +L + R DRE ++ Sbjct: 238 KAYLETLQAISRHSQVHLFFNNPSKHYWGDLADPRFIRELSLKTYREHGSDREANWLSET 297 Query: 281 ENAG------QLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL 334 E + D +G+PLLA+WGKLGRD+ YLLSDL +++E A+ + +L Sbjct: 298 EKVRLKNGEFERSADDELLQIGHPLLATWGKLGRDFFYLLSDL-NAREFTAYTPLEGADL 356 Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 L +++ IL L D S+ H CHSP REVEVLHD LL Sbjct: 357 LTQVKNRILNLVP------------DKQQPLQPPKADRSVVLHACHSPMREVEVLHDYLL 404 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA------------DRYLPYAISDR 442 + D TLTP+DI+VMVADID Y+P+IQAVFG +RY+P++ISD Sbjct: 405 RQFQADETLTPKDIVVMVADIDRYTPYIQAVFGQYQRYTEDRIGKKRPDERYIPFSISDG 464 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + ++ +L ++SLL L +S+F +E+VLA LDVP + +F+I L +R WV I Sbjct: 465 KLSENDVLLATYLSLLDLKNSQFSAEEVLAFLDVPAIREKFEIALSDLPQIRHWVARVEI 524 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 R+G+D + + + W+ GL R+LLGYAM +QG WQ L +D+S GL ++VG Sbjct: 525 RFGLDKN----CDSAVKNYNAWQAGLERLLLGYAMRESQGIWQDSLGFDDSDGLKGQVVG 580 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 +LA+ L +L W L Q +E+W +L FF+ D +T I +++ Sbjct: 581 NLAAFLDRLAQWHTFLQQSHSIEKWQQNLTALLTDFFVADEQTVDIQQYIRDAVRSVTEL 640 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + + + ++ + + ++L+ S +FL G V+ CTL+PMRSIPF+VVCLLGMN+ Sbjct: 641 LRSMDFQEDISAEVMAEVMTEKLNDNPNSLKFLVGKVSFCTLLPMRSIPFRVVCLLGMNE 700 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 YPR+ P FDLM ++GDRSRRDDDRYLFLEAL++AQ++LYISY+GRSI DN R Sbjct: 701 NDYPRRRTPNSFDLMRYHRRKGDRSRRDDDRYLFLEALLAAQEQLYISYVGRSITDNQPR 760 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 PSV+V +L DYI + +H F PQN+ +R ++ Sbjct: 761 QPSVVVSQLQDYINDNL-------------ADNALRLTEKVHPMTIFSPQNFYGNDR-TF 806 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 A+EWLP++ ++ + L+ L +F HPV+ FF+ +L V F+ +D Sbjct: 807 AKEWLPSSPAMPSGENKQAVLPLTEKLTRIELDQLVKFVRHPVKYFFENQLGVYFQNDDD 866 Query: 863 EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQ 922 IPDTE F L+GL Y+I L ++ R F R G LP G FG+++ Sbjct: 867 LIPDTENFTLDGLDLYRIKDDFLT--YSDEELCRYFERLSVKGILPRGNFGKVYEAKVRS 924 Query: 923 EMQQLADRVIA-CRQPGQSMEIDLACNGVQITGWLPQVQPD----GLLRWRPSLLSVAQG 977 EM+ ++V Q Q+ I+L +GV+ITG L + D + WR LS G Sbjct: 925 EMETFREKVRDYLLQTPQTQAIELDIDGVKITGNLTALYGDSPDKRRIAWRVGNLSDGFG 984 Query: 978 MQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLV 1037 ++ W+ HL CA+G S L + +D +AAE+A L + Y M+ + Sbjct: 985 LENWVYHLAKCATGEVT-SSLMITRDKSVTLAAIAAERATAQLGVYVRAYLCAMNRIQCI 1043 Query: 1038 LPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQL 1097 A LK + + R A RG D +++RL L Sbjct: 1044 PTMKITALLKCR-------------SADELRRLLDNAARPTDYNRG---DPYWRRLLLNL 1087 Query: 1098 TPETMEAIVEQSQRFLLPLFRFNQ 1121 + ++ + L + Sbjct: 1088 DDGELTDVLPTLTDWFAMLVDAYE 1111 >UniRef50_B9CWC7 Exodeoxyribonuclease V gamma chain n=2 Tax=Actinobacillus minor RepID=B9CWC7_9PAST Length = 1085 Score = 731 bits (1887), Expect = 0.0, Method: Composition-based stats. Identities = 378/1149 (32%), Positives = 577/1149 (50%), Gaps = 102/1149 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M VY+SN+L L ++ + +DPF+PE ILVQS GMAQWLQM +++ G+A N Sbjct: 1 MFTVYYSNQLTALAEMLIHHQKVNPNEDPFQPETILVQSVGMAQWLQMQIAESMGVAGNY 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +FP P SF+W + + P +PKE+ F + M+W+LM ++P +LER +F LR YLT D + Sbjct: 61 EFPFPTSFLWQQYRLLFPHLPKENIFERGVMAWRLMRIIPAVLERPEFQGLRAYLTHDKE 120 Query: 121 K--RKLFQLSSKAADLFDQYLVYRPDWLAQWETGH----------------LVEGLGEAQ 162 + KL+QL++K ADLFDQYLVYRP WL WE G L G+ E Sbjct: 121 QDSLKLYQLATKIADLFDQYLVYRPHWLVHWENGQWQEVVREIQIQPFSTNLQTGIQENV 180 Query: 163 AWQAPLWKALVEYTHQLGQPRW----HRANLYQRFIETLESATTCP-PGLPSRVFICGIS 217 WQ+ LW L+E T + HRA L Q+F E LE T LP R+F+ GIS Sbjct: 181 HWQSLLWNLLIEDTRKDYDELLFTTSHRAYLQQKFFEKLEDLTEEEYKKLPKRIFVFGIS 240 Query: 218 ALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLF 277 +LP L L ++ ++HL F NP + YWGD + A L K+ +Q+ E ++L Sbjct: 241 SLPTTQFATLLKLSEYCDVHLFFLNPSQMYWGDSIENAALEKMALKQQLSETEIQQL--- 297 Query: 278 RDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHN 337 GN LL+ WGK GRD+ L++ + ++ F + ++ L Sbjct: 298 --------------LAQQGNQLLSMWGKQGRDFFDQLAEYS-PEPIELFFENDQESNLSR 342 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 ++ IL +N + + D+SI H CHS REVEVL ++LL + Sbjct: 343 LKQAILNNDNPSYLEL---------------ENDNSIQIHNCHSAMREVEVLQNQLLRLF 387 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD--RYLPYAISDRRARQSHPVLEAFI 455 E++P L+P+DIIVM ADI+ Y+P+I AVF + RY+P+ ISD++ Q PV+ +F+ Sbjct: 388 EQNPHLSPKDIIVMAADIEQYAPYINAVFSRYGREDNRYIPFTISDQKISQVDPVISSFL 447 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 +L L DS F +E +L LL+V + +F E L LR W+ ESGIR + + + Sbjct: 448 VMLKLRDSTFSAEALLDLLEVEAIGQQFGFNREDLTCLRHWIKESGIRSTLTIEQENGWQ 507 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 ++W GL R+LLG ++ G WQ+ + ++ES GL AE VG LA + +L W Sbjct: 508 ----NYNSWENGLDRLLLGSCLKEENGIWQNTIAFNESYGLSAERVGKLAEFIEKLTAWS 563 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 + P+ W D++ A + + + A+ LI+Q+ +A+ A L A++ + V Sbjct: 564 VLSLESHPISTWKQALEDLVKAVYQENDASNDALFLIQQELEALEALVLQAKFDEPVAFE 623 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 ++ L RL+ + F+ G VN CTL+PMR+IPFKVVCLLGMN+ +PRQ FD Sbjct: 624 VIERALQDRLNSQSHVMHFMTGKVNFCTLLPMRAIPFKVVCLLGMNEADFPRQPVINSFD 683 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 LM P++GDR+RR+DDRYLFLEAL+SA++ YISY+G+S+ + ER PSVLV + +DY+ Sbjct: 684 LMQYHPRKGDRARREDDRYLFLEALLSAEEVFYISYVGKSLVKDEEREPSVLVSQFVDYL 743 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 + + L L H F +N++ G SY +EWL A QA + Sbjct: 744 AKYYSLS-----------------LEQEHPMNAFSERNFKSG-YVSYHKEWLEFAQQAVE 785 Query: 816 AHSEFVQPLPF--TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE 873 +H F + LP LP+ + L+ L F P + FF L + FR ED EI DTE F L Sbjct: 786 SHDFFAKSLPENSELPKEIELDELIAFIQSPTKQFFTRNLGIYFREEDDEIEDTEHFSLS 845 Query: 874 GLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA 933 L YQ+ QLL E F + G++P FG++ +Q + + Sbjct: 846 KLDEYQLTAQLLTTSSEMTSP--FFEKETLKGNIPVLNFGKLTQTELTNRIQDMRVELAE 903 Query: 934 CR-QPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGG 992 + L C V++ G LP + ++ WR L ++LW+ L+ Sbjct: 904 YLKGESDILPFSLQCTQVELVGNLPNLFGQEIVLWRVGKLRDKDTIKLWIYFLILTLLEK 963 Query: 993 NGESRLFLRKDG---EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTC 1049 +++ + + F + QA L I+ + + +S T Sbjct: 964 PFALKMYTLEGDKLTCFTFNTIEVSQAKEILEIYIKAF---------LKNKSNLTIAVTQ 1014 Query: 1050 YDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQS 1109 + ++ + + EG + + +R+ Q + +AI + + Sbjct: 1015 DLENYFKKMPQENIAEYCYQSLSKLSEGLN-----DEASYLKRILTQSSLIDYQAIHQNT 1069 Query: 1110 QRFLLPLFR 1118 + + Sbjct: 1070 LDWFALMQE 1078 >UniRef50_Q1N2R1 Exonuclease V gamma subunit n=1 Tax=Bermanella marisrubri RepID=Q1N2R1_9GAMM Length = 1101 Score = 730 bits (1884), Expect = 0.0, Method: Composition-based stats. Identities = 345/1153 (29%), Positives = 541/1153 (46%), Gaps = 101/1153 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML VY SNR++ L + +V + P +P+ I+V++ G+A WL+M L+Q GIAANI Sbjct: 1 MLNVYQSNRMEGLLGQLIKLVLQS-DSSPLQPKTIVVENPGLAHWLKMQLAQTLGIAANI 59 Query: 61 DFPLPASFIWDMFVRVLPEIPK----ESAFNKQSMSWKLMTLLPQ--LLEREDFTLLRHY 114 FP+P+ F W + ++ + + ES FNK ++W + +L + +L+R F LL Y Sbjct: 60 QFPMPSRFFWQLQRDLVSDSQEAWQTESIFNKDPLTWFVFDVLSESQILQRPGFELLADY 119 Query: 115 LTDDSDK-RKLFQLSSKAADLFDQYLVYRPDWLAQWETG--HLVEGLGEAQAWQAPLWKA 171 + D D+ +L+QLS++ AD++DQYLVYRPDW+ WE + E WQA LW+ Sbjct: 120 VKDSDDESLRLYQLSTRIADIYDQYLVYRPDWIKSWEQQTFAIDGQPLEEARWQAELWQI 179 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 L + G P HRA+L + F+ L++ LP V G S LP +++L L Sbjct: 180 LRQEAISRGFPLHHRASLTEDFLHLLQT-AESIESLPKDVIFFGFSTLPKNQIESLALLS 238 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 H ++HLL NP + YWGDI D A+L R + D Sbjct: 239 SHCDVHLLTPNPSQTYWGDILDERLQARLRLRGKSVPMAD-------------------- 278 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 GN LLAS G++G++Y LL DL+ +E D FVD +LL IQ+ IL L+ + Sbjct: 279 ---SGNALLASLGRMGQEYQRLLLDLDVYEEHDLFVDADDQSLLGRIQNQILHLQQSSSQ 335 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 ++P D SI CHS REVE + L L + + P+DI+VM Sbjct: 336 ------------PEHIEPNDDSIKIVGCHSAMREVE-VLHDHLLDLLQQSDVDPQDIVVM 382 Query: 412 VADIDSYSPFIQAVF-----GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 + D+ Y+P+I AVF +PY+ISDR ++ HP++ FI LL++P SR Sbjct: 383 IPDVARYAPYIDAVFQGGVDNRQGDRVRIPYSISDRPIQEEHPLINGFIQLLNMPKSRMS 442 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 +V+ALL++P + +FD+ E+ L ++QW+ + IRWG D+ + + LP Q+TW Sbjct: 443 YSEVIALLEIPAVYRKFDLDEKQLHQVKQWLELAAIRWGYDETHRSKQGLPKWQQNTWLH 502 Query: 527 GLTRMLLGYAMESA----QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 G R+L+GYA + P + GL A +G + + + +L + Sbjct: 503 GFQRLLMGYAFSERLAPNDELPFDISPVENVEGLEAASLGPVMNFVNELYEFVLATENLH 562 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 EW +D L FF E + + I Q + + + +P S++ + Sbjct: 563 SCTEWRYFLQDSLQRFFDVTTEEQPVLEQIHQVLENWLQTSQYVNFSHDIPFSVVYQGVQ 622 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 Q L + SQ F+ G VN CTL+PMRSIPFK V +LG+ND YPR + DLM + Sbjct: 623 QGLQKNNGSQHFMIGRVNFCTLLPMRSIPFKYVAVLGLNDQEYPRTVPGNSLDLMRFNRR 682 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 GDR+RRD+DRYLFLEA++SA+Q L++SY + N+ PSV++ E +DY+ + + Sbjct: 683 VGDRNRRDEDRYLFLEAILSARQGLWLSYRSLDQKQNTPMTPSVVLAEFMDYLDINFF-- 740 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG-ERQSYAREWLPA------------ 809 E+ L H F+ Q + G + SY W + Sbjct: 741 --------SGESAASQILFTQHPLQAFNRQYFIAGSKLHSYQTNWFKSIYQLQSDANQTF 792 Query: 810 ASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 + GK+ + V L TL RF+ P RAF +L + F D EP Sbjct: 793 QEEKGKSSVPVLSQPNGINMLEVGLSTLVRFFQLPARAFLNQQLNIQFHNLADMHEDEEP 852 Query: 870 FILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 F L GL RY +L ++ + R LP+G GE W+ Q ++ + Sbjct: 853 FELSGLDRYAAKDYILQQTIQGRSIDP----RRLQPWLPFGKIGERHWQRTRQSVEDVLA 908 Query: 930 RVIACRQPGQSMEIDLACN-------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWL 982 + + +++ + GW+ +V L+ + + ++L + Sbjct: 909 EATSMGLENKEGPLEINLACEYQNGQNTSLVGWINEVYQGRLVLLKVAKFQAKHLIELLI 968 Query: 983 EHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESG 1042 E A G S + +D P++A +A YL++L+ Y + PL +PE+ Sbjct: 969 ESAALNAQG-YNYSGCLVTQDIRINVKPMSASEAKSYLNKLLSYYFSHQNQPLNFMPETA 1027 Query: 1043 GAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETM 1102 A + D QKA +F++ + + E D Y R + ++ Sbjct: 1028 WALY--------NPTTKQDLRSQKALQRFVEVNDYSYYDP-ERLDPHYHRCFGNVS-ILP 1077 Query: 1103 EAIVEQSQRFLLP 1115 E ++E + P Sbjct: 1078 EQLIEVAHDLFEP 1090 >UniRef50_Q7VRF1 Exonuclease V, subunit n=2 Tax=Candidatus Blochmannia RepID=Q7VRF1_BLOFL Length = 1139 Score = 730 bits (1883), Expect = 0.0, Method: Composition-based stats. Identities = 386/1150 (33%), Positives = 630/1150 (54%), Gaps = 43/1150 (3%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M VYHSN LD+ L+ ++ ++L +P +PE+IL++ M+QW+++ L+ FGI+ANI Sbjct: 1 MFMVYHSNCLDLFMRLVINVMSNQKLSNPMKPEIILIEHKIMSQWIEIELTNYFGISANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 F SFI + + +L + S F+K M WK M +LP+L + +++ YL D + Sbjct: 61 IFMTIQSFIRKISIELLSDGIFISNFSKNFMYWKFMEILPKLYSSQKCAVIQKYLCFDVN 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLG-EAQAWQAPLWKALVEYTHQL 179 ++KL QLS + LF +YL+YRPDWL W++ +++ L E Q WQ+ +W+ + +T Sbjct: 121 QKKLGQLSEQLVSLFLEYLIYRPDWLDMWKSNKIIDNLNIEHQLWQSEVWRMFLTHT--- 177 Query: 180 GQPRWHRANLYQRFIETLES--ATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIH 237 Q + + N R I L++ LP R+FI G++A+ P+Y + L+ L HI+I+ Sbjct: 178 -QLQLYEFNSENRCIFLLQNNYQQIDWTKLPDRIFIYGVTAIAPIYWKILKLLSDHIDIY 236 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLL-TRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 L NPC YW + + K + + HS+E R+ + + N L ++ Sbjct: 237 LWVINPCEKYWNNTDYMDDINKHVYHQSNNHSWEVRKKYYYNNRCNKSILKSN------- 289 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQ-ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 LL SWG++G ++LLS LE E+ +FV +++LH +Q++IL+ + + V Sbjct: 290 YSLLNSWGEVGFHTLHLLSQLERPLFEIQSFVFPKTNSMLHILQNEILQFKQYSSNEVQK 349 Query: 356 EEFSRSDN----KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 E + K L D SIT H CHS RE+EVLHD LL M D L P ++IVM Sbjct: 350 ESSIFKKSANMQKNILKSTDQSITIHECHSLYREIEVLHDNLLRMFSNDSALLPGEVIVM 409 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 +I+ Y+ I+++F + +R LP++I SD HP++ +++L++P SRF E++ Sbjct: 410 APNINCYTESIKSIFNNMF-NRQLPFSILSDHSDYIHHPIISTILNILAIPTSRFTVEEI 468 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 +LL +P +A++F I +E ++ LR W+ ESG+RWG+D D LP T +TW FG R Sbjct: 469 FSLLSIPSIASKFSIDDEAMKLLRLWIVESGVRWGLDQDTQENFNLPVTEWNTWYFGFKR 528 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 MLLGYA+++ G W+++ PY+ S +V L L L WR L L++W+ Sbjct: 529 MLLGYAIKNQNGSWKNIFPYNYISEEYVHVVSGLGEFLEILKKWRNRLNGAYTLQKWMLY 588 Query: 591 CRDMLNAFFL---PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 R+M+N FF + E A+ L++ W I+ G+ Y + V +++LRD+L +L Sbjct: 589 FREMINDFFDFSKLNVEENQALFLLKNCWTNILESGIQLGYINTVTINILRDKLLIQLMN 648 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 ++ + +FL +N C + PM I K++C++G++D +PR F+L+S++ + GD + Sbjct: 649 QKKNYQFLPNAINFCNITPMCFISCKILCIIGIHDNEFPRDRFSYDFNLISKRFRIGDNN 708 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQ-DNSERFPSVLVQELIDYIGQSHYLPGDEA 766 D Y FL A + ++KLY+S+I + + S+ + ELI+YI Q YL GD+ Sbjct: 709 ICGQDYYAFLLACLLPKEKLYLSFINKLAFCYGNSISSSIFIDELIEYIAQRFYLIGDQN 768 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPG-ERQSYAREWLPAASQAGKAH-------S 818 L+ + R++ +L ++ MPF N+ ++QS+A EWL AA Sbjct: 769 LDIISNIKRIRKYLLYKYSCMPFSCSNFIAYSKKQSFANEWLAAAYADKNITVFTQSQQQ 828 Query: 819 EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRT-EDSEIPDTEPFILEGLSR 877 LP + T+ L L F+ HPVR +FQ RL+V F + + E F + L R Sbjct: 829 FLTTSLPHIIVSTILLRDLYDFYRHPVRMWFQKRLKVYFYQCTHDILLNDETFFVSNLRR 888 Query: 878 YQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA-CRQ 936 +Q+N +L++ + + + L+R F +G LPYG+FG+++W QC++M +LA ++ Sbjct: 889 FQLNVKLIDYFIHNKNIDTLYREFYDSGMLPYGSFGQLYWIEQCEKMYKLASKIKRYYSS 948 Query: 937 PGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGES 996 ++ I +++ G L VQ +GL+RW+P+ LS+ +WLEHL+YC SGGNGES Sbjct: 949 KIFTLNITFKIETIKLIGELHSVQENGLIRWKPAYLSMRDCFLVWLEHLIYCFSGGNGES 1008 Query: 997 RLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDA 1056 LF D W FP + QA L LI GY G++ PLL+L +SGGAW+ +D N Sbjct: 1009 WLF-GTDSTWHFPNFSKIQAQELLFFLISGYCLGINVPLLLLYKSGGAWINYVFDWNNRV 1067 Query: 1057 MLDDDSTLQKARTKFLQAYEGN-----MMVRGEGDDIWYQRLWR-QLTPETMEAIVEQSQ 1110 + D +KA + + ++G+ E D + ++L L E + I + S+ Sbjct: 1068 ICSDPDIHKKACQRLIYTWQGSSDDTQFSYLRESQDPYLRKLIPLYLNEEDIRIITDVSK 1127 Query: 1111 RFLLPLFRFN 1120 +LL L R+ Sbjct: 1128 DYLLDLMRYR 1137 >UniRef50_B0BTG3 Exodeoxyribonuclease V, gamma subunit n=8 Tax=Pasteurellaceae RepID=B0BTG3_ACTPJ Length = 1114 Score = 722 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 385/1156 (33%), Positives = 599/1156 (51%), Gaps = 92/1156 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M V+ S +L L AL+ + + + +PFEPE +LVQS GMAQWLQM ++ + G+AA+ Sbjct: 1 MFTVFFSQKLSSLAALLIRLQQNDPNPNPFEPETVLVQSVGMAQWLQMQIADQTGVAAHY 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FP P SF+W + + PE+PKE+ F ++S++W+LM L+P+ LE+ +F L YL D+ Sbjct: 61 QFPFPTSFLWQQYRVLFPELPKENIFERESVTWRLMRLIPKYLEKAEFESLNLYLNKDAR 120 Query: 121 K--RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGE-----------------A 161 + KL+QL+ K ADLFDQYLVYRP WL WE+ + L E Sbjct: 121 QYPLKLYQLAGKIADLFDQYLVYRPHWLVHWESNRIEAVLNEILAAIAFREKNERDILAN 180 Query: 162 QAWQAPLWKALVEYTHQLGQPR----WHRANLYQRFIETLESATT-CPPGLPSRVFICGI 216 WQ+ LW AL+E HRA L Q++ E L++ T LP R+F+ GI Sbjct: 181 LRWQSMLWNALIEDIKADSDEEVFMTSHRAYLQQQYFEKLDNLTESEKSKLPKRIFVFGI 240 Query: 217 SALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL 276 S+LP L L+ L +H E++L F +P + YW + + L KL +++ Sbjct: 241 SSLPATQLAVLKKLSEHCEVYLFFLDPSQEYWAESVEDKTLEKLALKRQ----------- 289 Query: 277 FRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 Q + GN LLA WGK GR+++ L + E ++ F + D+ L Sbjct: 290 ------LSQQDLDALLAEQGNQLLAMWGKQGREFLVQLVEQEPDNTIEVFDEYEGDSNLI 343 Query: 337 NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 +++ IL N + + L D SI H CHS REVEVLH++LL M Sbjct: 344 KLKNAILNFNN--------------EQRFGLAEQDRSIQIHACHSVMREVEVLHNQLLQM 389 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA--PADRYLPYAISDRRARQSHPVLEAF 454 E +PTL P+DIIVM ADID Y+P+I AVF RY+P+ +SD++ P++ +F Sbjct: 390 FERNPTLAPKDIIVMSADIDKYAPYINAVFARYEKGDKRYIPFTLSDQKVTAVDPIIASF 449 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 + LL+L +S F +E +L LLDV L RF++ E+ L+ LR WVN+ GIR+G+ Sbjct: 450 LMLLNLKESDFSAESLLDLLDVKALRERFNLQEQDLQTLRHWVNQVGIRFGLHIQQ---- 505 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 + W GLTR+LLG ++++ G WQ + ++ES GL A LVG LA + L W Sbjct: 506 -DDWQNHNAWENGLTRLLLGTSLKAESGIWQDSIAFNESYGLSATLVGFLAKFIENLTAW 564 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 + Q+ LEEW + ++ F+ E+ A+ L+ + + + A++ +++ + Sbjct: 565 YEFIQQDHTLEEWKARIQKLIGEFYQESNESLDALLLLNSTLEEVANKAEQAEFSESIGI 624 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 ++R L +L+Q++ S +FLAG VN CTL+PMR+IPFKVVCLLGMN+ +PRQ + F Sbjct: 625 EIIRLLLEDKLNQQQSSLQFLAGKVNFCTLLPMRAIPFKVVCLLGMNEADFPRQHSVNSF 684 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 DLM PKRGDR+RRDDDRYLFLEAL+SAQ+ Y+SYIG+S DN +R PSVLV +L+DY Sbjct: 685 DLMQYAPKRGDRARRDDDRYLFLEALLSAQEIFYLSYIGQSTTDNKQRLPSVLVSQLLDY 744 Query: 755 IGQSHYLPGDEALNCDESEARVK--AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 + + + +S + + F P+N+ P + SY +EWL Q Sbjct: 745 LAEHLTEQARLQASEKDSFSEALFWQKMVVQQPLTVFSPKNFTP-QYGSYDKEWL--LEQ 801 Query: 813 AGKAHSEFVQP---LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 + ++F+ L +P + LE L F ++P++ FF +L V FR ++ I ++E Sbjct: 802 QHEPLADFLNKSFDLKAEIPTEINLEDLIAFVSNPIKYFFNHQLGVYFRNDEESIAESEK 861 Query: 870 FILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 F L L YQ+ QL+ +E + E F++ + G+LP F ++ + + +L + Sbjct: 862 FSLSDLDDYQLRDQLVT--LEPAEREAFFKQEQLKGNLPIANFAKVSLQDLDDSINELRE 919 Query: 930 RVIACRQPGQSMEIDLACN----GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL 985 ++ +EI+ +++ G + D ++ W+ S L ++LW+ +L Sbjct: 920 LILPYLGESDILEIERLFEVEQLKIRLFGNIRNKFADEIVFWKVSSLKDKDYIRLWIYYL 979 Query: 986 VYCASGGNGESRLFLR---KDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESG 1042 + A G N E R K +RF ++AEQA L I Y L Sbjct: 980 LIQAQGLNLELTAIARSKEKAEIFRFNQVSAEQAFSQLQTYISAYVTSFRQ----LTWGI 1035 Query: 1043 GAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETM 1102 L ++ +D + Q+ + Y + + QR+ +Q + Sbjct: 1036 WTDLDNYFEKLSDKQNVAEYCQQQLSALMDKQYF---------EKSYLQRVLQQSSQLDY 1086 Query: 1103 EAIVEQSQRFLLPLFR 1118 I + + + + Sbjct: 1087 AQIHTVTLEWFELMQQ 1102 >UniRef50_B8FB93 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FB93_DESAA Length = 1085 Score = 720 bits (1857), Expect = 0.0, Method: Composition-based stats. Identities = 331/1134 (29%), Positives = 545/1134 (48%), Gaps = 81/1134 (7%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 LRVY SN L L + ++ ++ L P E E++L Q+ M +WL + L++ G AN+ Sbjct: 15 LRVYSSNSLQTLARQLADLLVKDPLP-PLEQEIVLTQNPVMGRWLYLELAKINGACANLR 73 Query: 62 FPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 LP +++ ++F V+P E ++S F+ +M+W++M L + +E FT ++ YL DD Sbjct: 74 VTLPNAYMHELFASVIPPMENEEQSPFSPWAMTWRIMDALARFMEEPPFTEIQRYLQDDP 133 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 D RK F LS + A +FD Y+++RP+ + W+ G WQA LW+ + + Sbjct: 134 DGRKQFGLSRRIAGVFDGYMLFRPEMILNWDHGKGG-------HWQAILWREISQ----- 181 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 G HR L F + L S + P LP R+ + G+ +PP +L +G+ + ++L Sbjct: 182 GFNDRHRPGLRTDFFKALRSGKSRPGVLPKRISLFGVWGMPPFHLDVFSGVGRMLPVYLF 241 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 NPC+ YW + ++ TR + + GN L Sbjct: 242 HVNPCKEYWAHAFSDKQITRITTRSPFTR-------------------PEELYLEKGNAL 282 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 LAS G +GRD++ L++ L+ + + LL IQ +ILE + E+ Sbjct: 283 LASLGGVGRDFLGLVAGLD-CHPQELYESPDRTALLGMIQGEILEFKE--------EDGR 333 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 ++ K P D S+ H CHSP RE+EVL+D +L L+EDP L P+DI+VM D+D ++ Sbjct: 334 KTQEKARPLPGDRSLAIHNCHSPMREMEVLYDHILKFLDEDPDLDPQDIMVMAPDMDKFA 393 Query: 420 PFIQAVFGSAPADR-YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 P+++AVF S LPY I+ + R P + AF+ + L SRF + VL L +P Sbjct: 394 PYVEAVFASPGPGGIRLPYCIAHKEVRTVSPSVNAFLEIFDLCQSRFEAAAVLDLAGLPA 453 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 +A +F +E+ L L +W+ ++ +RWG + D+ + L LPATG +TW GL R++LGYAM Sbjct: 454 VAEKFGFSEQDLETLARWIAQTRVRWGANADSRKALGLPATGDNTWESGLDRLMLGYAMA 513 Query: 539 S-AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + +Q++ P+ + + A L+G A L R L + ++EW+ + ++ Sbjct: 514 GLDEEFFQNISPFGDLAMEDAPLLGRFAEFTEALFQLSRKLEKSHEIQEWVKILEGVVQE 573 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 F PDAE + + YG V ++++ +A L+Q S L Sbjct: 574 FLSPDAEDLHLLQI---ALSKTAKAQSEQGYGREVAAAVVKAAVAGLLEQSSPSGSILRR 630 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 VN C++ IP KV+CL+GM+DG +PRQ +GFD M++ P+RGDRS R DDR+ FL Sbjct: 631 GVNFCSIAQGAGIPAKVICLVGMDDGAFPRQDGGMGFDYMARSPRRGDRSPRGDDRFSFL 690 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 +A+I+AQ +L+IS+ G+ IQDN+ PS LV ELIDY+ L Sbjct: 691 QAIINAQSRLHISFTGQGIQDNAALCPSPLVSELIDYVEAGFDLSDSGP----------- 739 Query: 778 AHLTCLHTRMPFDPQNYQP--GERQSYAREWLPAA----SQAGKAHSEFVQPL--PFTLP 829 L +H PF P + S++R++ AA ++ F QPL P Sbjct: 740 --LVVVHKLQPFSPDYFSGQCPGLFSFSRQYSQAADILQRGEKQSRQFFSQPLEEPEAQD 797 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV 889 +++ LE L F+ P ++ + R+ V + E F L GL R+ + +++ V Sbjct: 798 KSISLEALCAFFRMPPKSILRDRVGVFLDAYTEAMDSAEAFSLGGLERHVLAGKMVEKRV 857 Query: 890 EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA-CRQPGQSMEIDLACN 948 + + L+ +A G+LP+G G + ++ A + A + Q ++ D+ Sbjct: 858 QGRSSLDLYALAKAQGELPHGNVGAFAFNQLENQISPFARKAEAMLSEANQRLDADVMAG 917 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGE-SRLFLRKDGEWR 1007 +I G L + P GL+ +R + + W+ HL CA E LF D + Sbjct: 918 EWKIHGRLSPLGPWGLILYRTASAKAYDRLNAWIRHLFLCAVRPGFENKSLFAGTDAVYY 977 Query: 1008 FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKA 1067 + + A+ L+ L E Y +GM P PE+ A+ ++ + + +A Sbjct: 978 YDNVKQNAAVTRLAALAEVYDKGMEFPAPFFPETSFAYAQSMFKTDDVG---------QA 1028 Query: 1068 RTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 + + RGE D + + L P + + + P+ Q Sbjct: 1029 MKAARNKWGPDFYGRGEALDSYAALCFEGLDPLS-REFRDLAVEVYAPMLECEQ 1081 >UniRef50_C1DMH2 Exodeoxyribonuclease V, gamma subunit n=18 Tax=Gammaproteobacteria RepID=C1DMH2_AZOVD Length = 1168 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 430/1179 (36%), Positives = 594/1179 (50%), Gaps = 93/1179 (7%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK--FGIAAN 59 L V H NRL+ L L + R L P E E++LVQS G+ QWL++ L+ + GIAA Sbjct: 11 LMVVHGNRLEALRELAVEWMRRHPLA-PLEDEVVLVQSNGIVQWLKLALAGRDGCGIAAA 69 Query: 60 IDFPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD 117 I LPA F+W + VL IP+ES +K ++W+LM LLP LLE E F LR +L D Sbjct: 70 IRVELPARFLWQSYRAVLGSAGIPRESPLDKAPLTWRLMRLLPNLLEGEAFAPLRRFLED 129 Query: 118 DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL--------VEGLGEAQAWQAPLW 169 DSD RK QL+ + ADLFDQY VYR DWLA W GH L EA WQ LW Sbjct: 130 DSDLRKRHQLAERLADLFDQYQVYRADWLADWAEGHDRLRTSRDGARPLDEAARWQPALW 189 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 +AL+ + RA ++ RF+E L PPGLP RV + GIS+LP L+AL A Sbjct: 190 RALLADVGRD-TVATSRAGVHLRFVERLRGLDAPPPGLPRRVMVFGISSLPAQALEALAA 248 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L + ++ L NPCRY+WGDI L + R++R ++ Sbjct: 249 LARFSQVLLCVHNPCRYHWGDIVPDQDLLRHQYRRQRRKDGMA------------PGLSA 296 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE-----------LDAFVD---VTPDNLL 335 + +PLLA+WGK GRDYI LL + + +D F + P +LL Sbjct: 297 EDLHQHAHPLLAAWGKQGRDYINLLDRYDDPEHYRERFASLGGRIDLFDEEDGPRPGHLL 356 Query: 336 HNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA 395 +Q DIL L R + D S+ FH+ HS QREVE+LHD+LLA Sbjct: 357 GQLQDDILHLRTLEET--------RKEWPLVDPKADRSLRFHIAHSAQREVEILHDQLLA 408 Query: 396 MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA--PADRYLPYAISDRRARQSHPVLEA 453 DP L PR++IVMV D+++Y+P IQAVFG DRY+P++++D+ R P+ A Sbjct: 409 RFAADPGLRPREVIVMVPDVNAYAPHIQAVFGQYARDDDRYIPFSLADQGQRGCDPLPIA 468 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 LL LP+ R +VL LLDVP L ARF I E L LR+W+ +GIRWG+D + Sbjct: 469 VEQLLKLPEGRLTVSEVLDLLDVPALRARFAIEESDLPTLRRWIEGAGIRWGLDAERRAG 528 Query: 514 LELPA-TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 L LPA Q+TWRFGL RMLLGYA+ S + P+DE GL A L+G L LL L+ Sbjct: 529 LGLPAGLEQNTWRFGLRRMLLGYAVGSGAPC-AGIEPFDEIGGLEAVLIGPLVRLLEALD 587 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT-LIEQQWQAIIAEGLGAQYGDA 631 R LA+ EW + + ML FFL +E + + + + + + G + Sbjct: 588 DLHRRLARPVAPAEWGRILQAMLGDFFLARSERDETLLGQLGEALEEWLELCAGVDLDEP 647 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 +PL ++R+ LD+ R+SQRFLAG VN CTLMPMR+IPF+VVCLLGMNDG YPR P Sbjct: 648 LPLGVVREAWLGLLDRGRLSQRFLAGAVNFCTLMPMRAIPFRVVCLLGMNDGDYPRSQTP 707 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 L FDLM+ + GDRSRR+DDRYL LEAL++A+++LY+S++GRS++DN ER SVLV +L Sbjct: 708 LDFDLMAGDYRPGDRSRREDDRYLLLEALLAAREQLYVSWVGRSVRDNCERPASVLVGQL 767 Query: 752 IDYIGQSHYLPG---DEALNCDESEARVKAHLTCLHTRMPFDPQNYQ-PGERQSYAREWL 807 D++ LP + + + + R+ A LT H PF + ++ SYAREW Sbjct: 768 RDHLASGWRLPEEYHEASDSEADKAKRLLAALTTEHPLQPFSRRYFEGDDALFSYAREWA 827 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 + A + P PF + LETLQ F PV+ FF RL+V+ D Sbjct: 828 ALHRRDAPAGAARALP-PFEPDGALALETLQNFLRDPVKHFFTQRLKVHLDESMQAQLDE 886 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAE---------RLFRRFRAAGDLPYGAFGEIFWE 918 EPF L+GL +Q+ Q LL+A + + R + +G LP FGE E Sbjct: 887 EPFGLDGLQLHQLRQSLLDAASLALEDDPARVEAALEAAALRLQRSGRLPLAGFGERLRE 946 Query: 919 TQCQEMQQLADRVIAC-----RQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLS 973 + + + R + + + GV++ GWL ++ + L Sbjct: 947 QLLKPLPEQMRRYQSLCSLWSTRLESPKPLWFEHEGVELAGWLGGLRENAGGALARIELQ 1006 Query: 974 V---AQGMQLWLEHLVYC--------ASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQ 1022 +G W H + A+ G + L + +D F P+ +A L Sbjct: 1007 PGELKRGKDDWKWHRLLRPWVAHVAAAACGAPLTSLLVGQDASLEFAPIEQARAQAILRL 1066 Query: 1023 LIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVR 1082 +E +R G+ APL V + AWL ++ + D A +AYEG Sbjct: 1067 WLEAWRAGLEAPLPVALNTAIAWL--------NSGEEGDEEGGTAEKAAREAYEGGYNRS 1118 Query: 1083 GEGD-DIWYQRLWRQLTPETMEA-IVEQSQRFLLPLFRF 1119 GE R + + E S+ L Sbjct: 1119 GELAGSASLARQYPTFDDLIADRDFYEWSRDLYQSLLDH 1157 >UniRef50_Q0VNI2 Exodeoxyribonuclease V gamma chain n=3 Tax=Gammaproteobacteria RepID=Q0VNI2_ALCBS Length = 1138 Score = 714 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 403/1183 (34%), Positives = 563/1183 (47%), Gaps = 120/1183 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L V H NRL+ L L+ ++RE L P E E LVQS GMAQWL++ L+ GI+A Sbjct: 5 LMVLHGNRLETLTELVADWLQREPLS-PLETETFLVQSNGMAQWLKLQLADALGISAGFQ 63 Query: 62 FPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 F +PA F+W + VL E +P+ S F+K + W+L LLP LL E F LRH+L DD Sbjct: 64 FQMPARFLWGAYRTVLGEDQVPRTSPFDKSRLLWRLYRLLPTLLNSEHFGPLRHFLADDV 123 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL----------VEGLGEAQAWQAPLW 169 D RK QL+ + ADLFD Y +YR DWL WE G+ + +Q WQA LW Sbjct: 124 DGRKRHQLAERLADLFDAYQMYRADWLDDWENGNDRLRKTQDRDTFDDFPASQLWQAHLW 183 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETL---ESATTCPPGLPSRVFICGISALPPVYLQA 226 +AL+ Q R+ +++ F+ L + T PP LP R+ I GISALP L+A Sbjct: 184 RALLADMDDSKQG-LSRSAIHRDFMAALTQQQEQGTPPPRLPRRLIIFGISALPQQALEA 242 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 L AL +H +I +L NPC++YW DI + L + R+ Sbjct: 243 LAALSQHCQILMLVQNPCQHYWADIVEDKQLLRRQLDNRKRHLTALPENRV--------- 293 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ--------ELDAFVDVTPDNLLHNI 338 NPLLA+WGK GRD+I LL D + ++D F + P Sbjct: 294 ----------NPLLAAWGKQGRDFIGLLYDHDDPDSYRSAFQNQIDLFENREPHT----- 338 Query: 339 QSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 L + + E N+R +DSS+ F + HS QREVE+L D LL Sbjct: 339 ------LLQQLQQDILDLEPLPEPNRRLPLEMDSSLQFRIGHSAQREVEILQDELLDRFS 392 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSA--PADRYLPYAISDRRARQSHPVLEAFIS 456 DPTL PRD+IVMV DI++Y+P I AVFG RYLPY +SDR A + P+ +A S Sbjct: 393 NDPTLQPRDVIVMVPDIEAYAPHIDAVFGRLERDDPRYLPYTLSDRSAGAASPLAQAVES 452 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 LL LP RF + D+L LLDVP + RF I E L L +W++++ IRWG++ + L++ Sbjct: 453 LLHLPQWRFTATDILDLLDVPAVRERFGIDEGDLPQLARWIDQARIRWGLNSPQRKTLDV 512 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 P Q++W FGL RML GY + W + P DE +GL AEL G L+ LL L + Sbjct: 513 PGFEQNSWAFGLKRMLAGYLLGDGPA-WMGIEPLDEVAGLGAELAGRLSRLLDTLEQHWQ 571 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL-IEQQWQAIIAEGLGAQYGDAVPLS 635 + +W +L+ F P E + + + +A A + +PL+ Sbjct: 572 QSRTDASARQWQQRFTQLLDDLFAPVDEADQTLDAGLRDALNDWLAACAEADFDSLLPLT 631 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 + R L L+ E +SQRF+AG +NICTLMPMR+IPF+ VCLLGM DG YPRQ P+ FD Sbjct: 632 VARRPLLDALNAESMSQRFMAGRINICTLMPMRAIPFRHVCLLGMKDGDYPRQQQPMDFD 691 Query: 696 LMSQ--KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 LM Q + GDRSRRDDDRYLFLEAL+SA+ LYIS+ GR+++DNSER PSVLV +L D Sbjct: 692 LMRQWGNYRPGDRSRRDDDRYLFLEALLSARDSLYISWTGRNVRDNSERPPSVLVAQLRD 751 Query: 754 YIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE------------RQS 801 +I Q + E ++ LT H PF + + + Sbjct: 752 HINQRWHTDQGEPVD----------ALTVSHPLQPFSARYFYSANDASAANNADAHILHT 801 Query: 802 YAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 YA EW + P E + L RF PV FF+ RL+ + + Sbjct: 802 YANEWRALHEEQTHRVDNDQPLPPLENNEPISCAALGRFLKQPVAHFFEQRLKARLKQQR 861 Query: 862 SEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER------LFRRFRAAGDLPYGAFGEI 915 + D+EPF +GL R+Q+ QLLN + R +GDLP F E Sbjct: 862 QVLDDSEPFSFDGLQRFQLQDQLLNEALRAGPEHANDAMRVAMDRLAGSGDLPLAPFDEG 921 Query: 916 FWETQCQEMQQLADRVIACRQPGQSM----EIDLACNGVQITGWLPQVQ----PDGLLRW 967 ++ + Q + ++ EI L +QI WL ++ L Sbjct: 922 NRDSLLLPLAQPLEHYFTLLADSGTLQPQQEIRLTAGPLQIEDWLTDLRGSSANAQRLVL 981 Query: 968 RPSLLSVA--QGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIE 1025 L + + W HL CA+G + +DG + P + A L QL Sbjct: 982 HTGKLKERFDKLTRDWTLHLAACAAG-LPLTTHIQGQDGRFSLPHIHRSDAQQCLDQLGY 1040 Query: 1026 GYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEG 1085 +++ + PL V + AWLK + + +E M GE Sbjct: 1041 AWQKALCEPLPVACATAFAWLK-------------GEEKDNGENEARKVFESGFMHTGEQ 1087 Query: 1086 D-DIWYQRLWRQLTPET------MEAIVEQSQRFLLPLFRFNQ 1121 + + R W A +++ PL++ Q Sbjct: 1088 EKEPAIARAWADFDTLLAASHGDANAFEYWTEQLYAPLYQHAQ 1130 >UniRef50_C5S7Q0 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7Q0_CHRVI Length = 1200 Score = 714 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 390/1217 (32%), Positives = 566/1217 (46%), Gaps = 140/1217 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-------- 53 + NRL+ L L+ + R L P E E ILVQS G+AQWL++ L+ Sbjct: 16 FMLIQGNRLEELRGLLVAWMHRHPLA-PLENETILVQSNGIAQWLKLALAATPTSDDRDA 74 Query: 54 ----FGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLE----- 104 GIAA +D LPA FIW ++ VL ++P+ S F+K ++W+L LL +L Sbjct: 75 ITGGQGIAAALDVMLPARFIWRVYRAVLGDLPETSPFDKAPLTWRLYRLLERLTGVAPLQ 134 Query: 105 -----REDFTLLRHYLTDDSDK---RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVE 156 + LR +L D + R+ +QL+ + ADLFDQY VYR DWL W G V Sbjct: 135 SSDTRFDALDPLRGFLAVDGQEAAPRRRYQLAERLADLFDQYQVYRADWLEAWSQGRDVL 194 Query: 157 GLGEAQA--------WQAPLWKALVEYTH------QLGQPRWHRANLYQRFIETLESATT 202 + WQ LW+AL RA +++ F+E + Sbjct: 195 IRPNGERRSIPVGQDWQPVLWRALQADVDAEHGPDDPPLRHASRAEVHRVFLERTRAGQD 254 Query: 203 CPP---------GLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKD 253 P LP RV + G+S+LP L+AL+A+ ++ L NPCR+YWGDI + Sbjct: 255 ADPTRIAALRSVELPRRVIVFGLSSLPRQMLEALEAIAPVCQVMLFVLNPCRHYWGDIIE 314 Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 L + R++ + + G+PLLA+WGK GRDYI L Sbjct: 315 GRDLFRHPYRRQTAR-------------KVPENLDESRLHLNGHPLLAAWGKQGRDYIRL 361 Query: 314 LSDLESSQE--------------LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 L + + + +D F +LLH +Q DILEL Sbjct: 362 LDEQDERRRYEAYFQGLTARDQGIDLFASPGTGSLLHQLQDDILELRPL--------HER 413 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE----DPTLTPRDIIVMVADI 415 + D S+ F V HSPQRE+E+LHDRLL E D L PR+++VMV DI Sbjct: 414 QDQRTVIDPEHDRSLEFIVAHSPQREIEILHDRLLDAFERSARTDRPLQPREVLVMVPDI 473 Query: 416 DSYSPFIQAVFGSAP--ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 ++P IQAVFG R +P+ I+D+ R +P++ LL+LP +RF ++L L Sbjct: 474 AVHAPHIQAVFGRFDPDDRRAIPFQITDQGQRHRNPLVIGLEHLLNLPRARFAVSELLDL 533 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA-TGQHTWRFGLTRML 532 LD+P L RF + E L LR W+ + +RWG+D L LP Q+TWRFGL R+L Sbjct: 534 LDIPALRTRFSLDEPDLPRLRLWIAGANVRWGLDAAQRASLGLPEGLEQNTWRFGLRRLL 593 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 LG+A G W+ + P+DE GL A L+G LA LL +L + + L + R W + Sbjct: 594 LGFASGD-AGPWRDIEPHDEVGGLEAALLGPLAQLLERLEAYWQCLTEPRTPAGWSALIS 652 Query: 593 DMLNAFFLPDAETEA-AMTLIEQQWQAIIAEGLGAQ-YGDAVPLSLLRDELAQRLDQERI 650 +L+ FF+ +E++ + I + A A+ + + + L ++RD L RLD+ + Sbjct: 653 ALLDDFFMETSESDGVTLARILLELDAWEADCVQGGLGAEPIALEIVRDSLLARLDRPSL 712 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 +QRFL G VN TLMPMR+IPF+ + LLGMNDG YPR+ P FDLM+ + GDRSRR+ Sbjct: 713 TQRFLGGAVNFATLMPMRAIPFRQIWLLGMNDGDYPRRRVPADFDLMAGDYRPGDRSRRE 772 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 DDRYLFLEAL+SA++KL I ++GR I+DNSER PSVLV +L D++ P + Sbjct: 773 DDRYLFLEALLSAREKLVIGWVGRGIRDNSERPPSVLVGQLRDHLAAGWRRPDGD----- 827 Query: 771 ESEARVKAHLTCLHTRMPFDPQNYQPGE---RQSYAREWLPAASQAGKAHSEFVQPLPFT 827 AR+ A LT +H PF ++PG +YAREW AG + P+ Sbjct: 828 --GARLLAALTSVHPLQPFGRGYFEPGRAKTLFTYAREWRAVHDGAGTTEVSAERLAPWL 885 Query: 828 LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNA 887 V L+ LQ F P+ A F RL++ E PD E F L+GL +QI +L++ Sbjct: 886 PETPVDLDQLQGFLRDPIMALFDQRLRIKAPGEVVAPPDVETFALDGLGDWQIKDELISR 945 Query: 888 LVE--------QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ 939 E + + RF+A G LP G+ GE T + L A Sbjct: 946 TFEPGLDRPALEQRLQAGIARFQAQGRLPDGSLGERLGRTVIAYLPVLHAAWDAALSEWP 1005 Query: 940 S---------MEIDLACNGVQITGWLPQVQPDGLLR----------WRPSLLSVAQGMQL 980 +E+++ + + L ++ R + ++ Sbjct: 1006 RRLDRPIPVMVEVNVPAGRLVLEDVLSDLREGDDGRGQIILQTSGLTKDKHYQWRNTLRA 1065 Query: 981 WLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPE 1040 W+ HL G + L G+ R P+ ++A L L+ + EGM PL V Sbjct: 1066 WVRHLAAQ-LDGEPVTTRLLTPSGDARLEPVPVDEARERLEALLVVWWEGMQRPLPVALN 1124 Query: 1041 SGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPE 1100 +G AWL D KA LQA++ + + + R + Sbjct: 1125 AGMAWLDK--DGPETLEDGTAPEELKAWNAALQAFDLDHTY-----NAYVGRCYDSFEAL 1177 Query: 1101 TME-AIVEQSQRFLLPL 1116 + R L Sbjct: 1178 WSGVEFARWAHRLYGGL 1194 >UniRef50_Q5QUQ7 Exonuclease V gamma subunit n=2 Tax=Idiomarina RepID=Q5QUQ7_IDILO Length = 1155 Score = 706 bits (1823), Expect = 0.0, Method: Composition-based stats. Identities = 379/1180 (32%), Positives = 558/1180 (47%), Gaps = 107/1180 (9%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 V H +RL+ L + + L P E E +LVQS G+AQWL++ L+Q GIAA ID Sbjct: 8 FIVAHGHRLEDLTDVAVTFTQNYPLA-PLEQETVLVQSNGIAQWLKINLAQASGIAAMID 66 Query: 62 FPLPASFIWDMFVRVLPE-IPKESAFNKQSMSWKLMTLLPQLLER-EDFTLLRHYLTDDS 119 LPA F W + VL + IPK S F+K ++W+LM LLP+L+E F L+HY +DDS Sbjct: 67 VTLPARFQWKAYRAVLGDDIPKTSPFDKDRLTWRLMRLLPELIEHNPHFAPLKHYTSDDS 126 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL----VEGLGEAQAWQAPLWKALVEY 175 D RKL+QLS + ADLFDQY VYR DWL W G + + + Q WQ LW+A+ Sbjct: 127 DGRKLYQLSGRLADLFDQYAVYRADWLDNWVRGQDMLEQEQPVEDEQLWQPELWRAVSND 186 Query: 176 THQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIE 235 +RA L+QRFI+T ++ T P GLP RV + GIS+LP LQ L A+ + + Sbjct: 187 IGIDDY-WNNRAELHQRFIDTAQALTERPAGLPPRVVVFGISSLPQQMLQVLDAIKGYTQ 245 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 I L NP +Y+W DI D + + ELP N D + Sbjct: 246 ILLCVHNPSQYHWADIVDGKEALRQAVKASSRLKHKPELPD---------DPNDDELHQL 296 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQE---------LDAFVDVTPDNLLHNIQSDILELE 346 +PLLASWGK GRDYI LL + + L+ F D+LL +Q DIL L Sbjct: 297 AHPLLASWGKQGRDYIRLLDLYDETLAKQEAFNTIKLELFEPHNTDHLLAQLQDDILNLR 356 Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 + D S+ FHVCHSPQRE+EVLHD+LL +DP L PR Sbjct: 357 PVQETRELW---------PTPNTADKSLQFHVCHSPQRELEVLHDQLLDAFAKDPELKPR 407 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRY------LPYAISDRRARQSHPVLEAFISLLSL 460 D++VM+ D+++Y+P+I AVFG +PY I+D+ R P++ A LL + Sbjct: 408 DVMVMLPDVNTYAPYIDAVFGRYHNRFGERDPRAIPYTIADQGERHQRPLMIALELLLQV 467 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA-T 519 RF D+ LL VP + RFD++++ L L++WV E+G RWG++ + + +PA Sbjct: 468 DQLRFTQTDLFNLLSVPAVQQRFDMSDDDLPQLKRWVKEAGARWGLNAEQRAQFYMPAAE 527 Query: 520 GQHTWRFGLTRMLLGYAMES-------AQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 ++W FGL RM+ GYAM W +V PY E +GL A LVG LA ++ L Sbjct: 528 ETNSWWFGLKRMIAGYAMGDLADVNLENDSPWANVEPYTEVAGLSAALVGCLADVVRTLE 587 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL-IEQQWQAIIAEGLGAQYGDA 631 W + E L EW+ +L FF + +++ + + + + + A Sbjct: 588 QWWQRAQGEHSLPEWVTQGEWLLEQFFEAEEDSDRLLLAKLSDELYQLRDICVEADNESQ 647 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 + L + +D +R+DQ+ ++QRFLAG VN TLMPMR+IPFK VC+LGMN+ YPR Sbjct: 648 LRLPIFKDAWLERVDQQNLNQRFLAGAVNFATLMPMRAIPFKYVCVLGMNESDYPRSTPR 707 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 + FDLM+ + + GDRSRRDDDRYLFLEA++SA+ Y+S++G S +DNSER PSVLV +L Sbjct: 708 VDFDLMTDRYRPGDRSRRDDDRYLFLEAMLSARDCFYLSWVGYSAKDNSERTPSVLVAQL 767 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY--QPGERQSYAREWLPA 809 D++ Q + LT +H PF+P + + + +YA EW A Sbjct: 768 RDHLQQGWEVD--------------INSLTVVHKLQPFNPYYFNQEDSDYFTYASEWAQA 813 Query: 810 ASQAGKAHSEFV--QPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 A + S L T+ + ++RF P R +F RL F ++ D+ Sbjct: 814 HQGAVASTSRTASETAADDELERTLSINDIKRFIEEPARLYFNWRLDTYFSRNSEDLDDS 873 Query: 868 EPFILEGLSRYQINQQLLN----ALVEQDDAER----LFRRFRAAGDLPYGAFGE----I 915 E F+++ L + + +L++ AL+ E R + G L GA E Sbjct: 874 EAFVMDNLQSWSLTTRLVDAGKKALLNGAGIEASLLKELNRIKREGALGIGAIAEQNGLQ 933 Query: 916 FWETQCQEMQQLADRVIACRQPGQ-SMEIDLACNGVQITGWLPQVQPDG-----LLRWRP 969 E + ++ + + + +G+ I + + + + Sbjct: 934 LLEQSQEILETYQQSIAGYSGVNEFPETVFFEHSGLTIDDTVTGLHSNENGERLWVVTSA 993 Query: 970 SLLSVAQGM----QLWLEHLVY-----CASGGNGESRLFLRKDGE-WRFPPLAAEQALHY 1019 S ++ G W Y + L + K G + P+ AE A+ Sbjct: 994 SNIAAKNGKGINSGGWKHASAYYLGLLLLNLQKPTRLLIVSKGGCQLQVAPVPAELAVQQ 1053 Query: 1020 LSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNM 1079 L Q++E P + + G WL D L + Q YE + Sbjct: 1054 LEQILELVALSAQQPQPMHLDVGMTWLSAMDKNSQDEALAHE--------AARQKYEEDG 1105 Query: 1080 MVRGEG--DDIWYQRLWRQLTP-ETMEAIVEQSQRFLLPL 1116 + R+ + P+ Sbjct: 1106 FQDPALVTKSDYCGRVAESYEAIQASPHFRRFMDELYDPM 1145 >UniRef50_C6MAC3 Exodeoxyribonuclease V, gamma subunit n=3 Tax=Neisseriaceae RepID=C6MAC3_NEISI Length = 1068 Score = 706 bits (1823), Expect = 0.0, Method: Composition-based stats. Identities = 335/1138 (29%), Positives = 527/1138 (46%), Gaps = 94/1138 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +Y SNRL+ L AL I L+ E I+VQS GM ++L + L+++ G+AAN+ Sbjct: 1 MFYLYQSNRLESLAALFAGIQRVRPLESALAAEQIVVQSQGMRRYLSVYLARELGVAANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLP--QLLEREDFTLLRHYLTD- 117 F LPA W + +++P+IP S F+ + M W+L+ L + +F +R L Sbjct: 61 QFSLPAGLTWQLMQKLIPDIPALSPFSPEVMRWRLLDLFRSERFQTTSEFENVRSILQSY 120 Query: 118 -DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYT 176 S + +QL+ + AD+FDQYLVYRP W+ W+ G L+ GLGE + WQA LW+ Y Sbjct: 121 LGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQEGKLL-GLGEDEVWQAQLWR----YL 175 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 Q HR L+++ + +L+ LP R F+ GIS + P+YLQ LQ + +H ++ Sbjct: 176 DDGNQSAPHRVALWEKLLSSLDK-----AHLPERFFVFGISTMAPMYLQLLQKISEHCDV 230 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 + NP YWG++ + A L K + G Sbjct: 231 FVFALNPSGQYWGNVIEAAQLLK--------------------------GGDEADLSQTG 264 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 +PLLAS GK GRD+ L+++ +E F +V+ D LLH +Q+DI L + Sbjct: 265 HPLLASLGKQGRDFFDFLTEI-GLEEQPVFEEVSDDTLLHCLQNDIQNLRMPSE------ 317 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + R D SI HSP RE+++L D+LL +L E P P DI V+ +I+ Sbjct: 318 ------HSRADLLGDGSIRIVSAHSPLRELQILKDKLLRILHEHPDWQPHDIAVLTPNIE 371 Query: 417 SYSPFIQAVFGSA-PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 YSPFI+AVFG A + LPY++SD + + +L A L L +SRF + VL LL+ Sbjct: 372 PYSPFIEAVFGQAQGGAQALPYSVSDVKLSRRQSLLYALEQTLDLLESRFEVDKVLPLLE 431 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 ++ RF +T + L L V E + WG+D A TW+ L R++LG+ Sbjct: 432 SGLVLRRFGLTADDLPLLHDTVAELNVHWGLDGTMRGA----ADNLFTWQQALERIVLGW 487 Query: 536 AMESA-QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 + WQ+V + ++ G A+ + L+ + EEW CRD+ Sbjct: 488 MLPDDGSPLWQNVSAWHGDVN-RLDVFGRFAAFIRTLSRLAAEWRKPASAEEWTERCRDL 546 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 + + FLPDA+ + A+ EQ E A + +P + + + L E F Sbjct: 547 VQSLFLPDADDQYALQQFEQALAKWQEETALAGFSGTLPQHTVIRHIRRFLGSES-QAGF 605 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 L G + C+++PMRS+PFKV+CLLG+NDG +PR FDL+++ P++GDR+RRDDDRY Sbjct: 606 LRGGITFCSMVPMRSLPFKVICLLGLNDGDFPRNTKAAVFDLIAKHPQKGDRARRDDDRY 665 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 LFLEA+ISA+ LY+SY+GRSI+++ E PS LV ELID I Sbjct: 666 LFLEAIISARDILYLSYVGRSIRNDDELAPSALVSELIDTIAAMTG----------RRSK 715 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGE----RQSYAREWLPAA-SQAGKAHSEFVQPLPFTLP 829 + H H PF + + S +++ A +A F + L P Sbjct: 716 GLAEHWVEQHPLQPFSHRYFIADNISDDLFSTRQDYAEALNRPREQARPFFSEALEENTP 775 Query: 830 ET-VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 V + RFW +PV+A+ Q L D EPF + + I L+A Sbjct: 776 VPTVWQDDFIRFWKNPVKAWLQQTLGWREPYRDEAWESAEPFEPQRADK--IAAAYLDAR 833 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN 948 D + R A LP G G+++ + ++ D + ++ + Sbjct: 834 RHNQDFQETAVRLDAESLLPAGELGKLWQQNFQAAAKR-IDGALLQSPKLPPFAYEVPFD 892 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGG---NGESRLFLRKDGE 1005 G + G L + G + + + Q + L LEHL++CA G ++ + Sbjct: 893 GQTLQGSLGNLYQCGQVFYLDRKPNAPQRIALLLEHLIFCAVGSSETETRQTHIVQPEET 952 Query: 1006 WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQ 1065 +P + + QA L + + + G + PL ++ A + Q + + Sbjct: 953 TLYPEIPSSQAQEMLQKWLAFFNLGQTRPLPFFAKTSLAAAEAYGKKQ---------SWE 1003 Query: 1066 KARTKFLQAYEGNMMVRGEGDDIWYQRLWR--QLTPETMEAIVEQSQRFLLPLFRFNQ 1121 K ++Y GN + +G+ D ++ P + L+PL + Sbjct: 1004 DTLNKARESYHGNKVSKGQKDYTEVALVFGNEDTEPVEGALFQRLVEELLIPLLDAVK 1061 >UniRef50_D0KY94 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KY94_HALNC Length = 1183 Score = 705 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 363/1217 (29%), Positives = 556/1217 (45%), Gaps = 145/1217 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-------F 54 + NRL++L+ ++ ++R L P E E LVQS GMAQWL++ L++ Sbjct: 15 FLLIQGNRLELLQQVLIDWLKRHPLA-PLENETFLVQSNGMAQWLRLGLARPRSAQDGGL 73 Query: 55 GIAANIDFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLR 112 GIA I+ LPA W + VL +P E+ +K + W+LM LLP L+ F LR Sbjct: 74 GIATGIEMILPARLQWQCYRAVLGTDFVPAEAPLDKDKLVWRLMRLLPNLIHTPSFLPLR 133 Query: 113 HYL--TDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL-----VEGLGEAQAWQ 165 HY+ D R+L+QL+ + AD FDQY VYR DWL W+ GH L + Q WQ Sbjct: 134 HYIVTDQRPDDRRLYQLALRVADQFDQYQVYRADWLRHWQEGHDDLPAHETRLPDEQRWQ 193 Query: 166 APLWKALVEYTHQLGQPRWH------RANLYQRFIETLESATTCPPGLPSRVFICGISAL 219 PLW+AL+ + R RA+L+ F + P GLP R+ + G+S++ Sbjct: 194 PPLWRALLADIRERQDDRDGIEFAAGRADLHTAFRKAASEQKARPEGLPRRIVVFGLSSI 253 Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 P L L + ++ + F NPC YYWGDI D L + RR Sbjct: 254 APQVLDVLAVASRWSQVIVCFLNPCEYYWGDIIDGHQLFAQRYQGRRPYKSAPNETA--- 310 Query: 280 SENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDA-----------FVD 328 +PLLA+WG+ GRD + LL E + +L A VD Sbjct: 311 ---------------HAHPLLAAWGRQGRDLMRLLDQFEENAQLAANPLTLTPFESTVVD 355 Query: 329 VTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEV 388 +LL IQ DIL+L R+ N+R D S+ FH+ HSP REVE+ Sbjct: 356 SAKSSLLTLIQDDILKLRTPDEL--------RALNRRLEPDQDHSLHFHIAHSPLREVEI 407 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD--RYLPYAISDRRARQ 446 LHD+LLA E D +L P DIIVMV D+ Y+P I A+FG D +++P++ISD+ A Sbjct: 408 LHDQLLAAFEADTSLKPTDIIVMVPDMSLYAPAISAIFGRFGRDDPQHIPFSISDQAASG 467 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 ++ A +L+LP SR + ++L LL P+L ARF I+E L L W++ +GIRWG+ Sbjct: 468 QVALINALEQILNLPTSRLLRSELLDLLGSPLLLARFGISETDLTTLHDWIDSAGIRWGL 527 Query: 507 DDDNVRELELP-ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 + + +P Q+TW FGL R+LLGY W + P+ G+ AELVG LA Sbjct: 528 NAQHREAFGVPPGMEQNTWAFGLNRLLLGYLSGDENAIWDEIEPHPVMDGISAELVGKLA 587 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE-----------AAMTLIEQ 614 L+ QL+ + + L+++ EW+ R ++ FF + + Sbjct: 588 QLVQQLDKYTQRLSEKCTPTEWVARLRRLMTDFFSLSDTQNHLDSPEIQIEMDTLARLHN 647 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 + + +A+ A + + + + +R RL+ R+ QRF+ G VN TLMPMR+IP++ Sbjct: 648 ELERWLADCSVAGFENEIDIETVRHAWLNRLEPHRLHQRFIVGGVNFATLMPMRAIPYRH 707 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 + LLGM+D YPR+ P FDLM+ + + GDR+RR+DDRYLFLEAL++A+++L IS++GR Sbjct: 708 IYLLGMDDANYPRRQTPNDFDLMNGRYRPGDRARREDDRYLFLEALLAARERLSISWVGR 767 Query: 735 SIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 +I +N R SVLV +L DY+ Q +P + + + T H PF + + Sbjct: 768 NINNNKIRPASVLVSQLRDYLDQFWAVPEPHSCSEIQ---------TTEHPLHPFSRRYF 818 Query: 795 QPGE--RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMR 852 ++A +W + + E + L TL F P R Sbjct: 819 SADNTDLFTFANDWRAVHDSTQGTSKT--ELPIWLPKEPLTLNTLSDFLRTPAHTLLTKR 876 Query: 853 LQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFR------------- 899 V R +E+ D EPF L+GL R+Q+ +++ + + Q + Sbjct: 877 FGVYLRPTATELEDHEPFELDGLQRWQLKKEINDRVRHQLAIQAHATSQMTTPTIEHISA 936 Query: 900 -------RFRAAGDLP-----YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC 947 + R G LP + + Q Q +L R + I + Sbjct: 937 LISTQYGQARLGGRLPIVSPAFEYSELLPLIDQWQRWLELNLRFHQTAAKSPVLSIR-SD 995 Query: 948 NGVQITGWLPQVQPDGL---------------LRWRPSLLSVAQGMQLWLEHLVYCASGG 992 G+ + +P V R + + + W HL+ + G Sbjct: 996 RGIMLEASVPDVYSTESSIPNDTLARLIFIEGKLHRGQDIEWHKCVAQWPAHLLAQLTHG 1055 Query: 993 NGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDA 1052 + E+ L + G F P+ E A +L L++ + + + AP + ++ L Sbjct: 1056 SVETYLI-GETGTLCFTPIEKEMAKQHLLTLLDAWFDAVQAPYPLACKTAFCLLAQEMTP 1114 Query: 1053 QNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDD-IWYQRLWRQLT------PETMEAI 1105 +N A K + +EGNM V GE + RLW + + Sbjct: 1115 EN---------TDSALKKARECFEGNMKVPGEVTNSPALARLWPDFSTLINGQSFAKKQF 1165 Query: 1106 VEQSQRFLLPLFRFNQS 1122 E SQ P+ ++ Sbjct: 1166 TELSQIIYAPIKDAIEA 1182 >UniRef50_C1D6T7 RecC n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6T7_LARHH Length = 1159 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 392/1194 (32%), Positives = 543/1194 (45%), Gaps = 127/1194 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF-GIAANI 60 + H+NR ++L ++ + R+ L P + E+ LVQS GMAQWL+ L++ GIAA + Sbjct: 7 FTILHANRAEMLRDVILAWLARDPLSSPLDDEVFLVQSQGMAQWLKHALAESPAGIAAAL 66 Query: 61 DFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 DF LP F+W + VL E +P +S F+K +SW+L LP L F L ++ D Sbjct: 67 DFQLPQGFLWRCYRAVLGEDSVPAQSPFDKAPLSWRLYRELPAWLHEPVFAPLARFVEAD 126 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL-------VEGLGEAQAWQAPLWKA 171 +D R+L+QL+ + ADL+DQY YR DWL WE GH L E + WQA LW+ Sbjct: 127 ADPRRLYQLAHQLADLYDQYQSYRADWLTGWENGHDDITRHGRPAPLPEGERWQAELWRR 186 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 L HRA ++QRF+ L T P LP RV + G+SALP L+AL A+ Sbjct: 187 LAGQL--ASARHTHRAAVHQRFVAALREGTPPPGSLPERVVVFGLSALPQQTLEALDAIS 244 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 +H + + NPCRYYWGDI + + QR L + Sbjct: 245 RHSHVLMAVNNPCRYYWGDIVEGREWLRRQAEQRHRRRSGMPAAL-----------DDST 293 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQ--------ELDAFVDVTPDN---LLHNIQS 340 +PLLASWG+ GRD+I LL+D + Q ++D F + P LL +Q Sbjct: 294 LHLHAHPLLASWGRQGRDFIALLADYDRWQSAAATHAQDIDLFDEAVPAGTLPLLQQVQQ 353 Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 +LELE L D SI FHV HSP REVE+LHD+LLAM ++ Sbjct: 354 AVLELEPL------------PAEPHRLPLPDHSIAFHVAHSPLREVEILHDQLLAMFDDP 401 Query: 401 P-TLTPRDIIVMVADIDSYSPFIQAVFGSA--PADRYLPYAISDRRARQSHPVLEAFISL 457 L PRD++VMV DI SY+PFI+AVFG R++P+A+SD+ A + P+L A L Sbjct: 402 ELALKPRDVMVMVPDISSYAPFIRAVFGKLPPDHPRFIPFALSDQSAVSTEPLLRALQQL 461 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L LP R +VL LLDV + RF + E L L +W+ SGIRWG+ EL +P Sbjct: 462 LDLPALRLTVSEVLELLDVAAMRRRFRLRETDLPLLTRWIEGSGIRWGLSAAQRAELGMP 521 Query: 518 AT-GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 Q++W FGL RMLLGYA + WQ + PYDE G+ A L G LA LL L WR+ Sbjct: 522 DDFDQNSWHFGLDRMLLGYACGAGAS-WQGMAPYDEVGGMDAALAGQLADLLSTLAHWRQ 580 Query: 577 GLAQERPLEEWLPVCRDMLNAFFL-PDAETEAAMTLIEQQWQAIIAEGLGAQ-YGDAVPL 634 L + W + A D I +A G +PL Sbjct: 581 CLQEPATPAGWQARIAALAEACLDIKDEHDLLLYAGIADTLDNWVATLDGNGLADTRLPL 640 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 ++RD L +L +S RFL G VN TLMPMR+IPFKV+CLLG+NDG YPR F Sbjct: 641 EVVRDVLLGQLADTSVSMRFLGGAVNFGTLMPMRAIPFKVICLLGLNDGDYPRSQNRADF 700 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 DLM+Q + GDRSRRDDDRYL LEAL+SA+++ Y+S++G+S +DN R PSVLV++L DY Sbjct: 701 DLMAQDYRPGDRSRRDDDRYLLLEALLSARRRFYLSWVGKSPRDNRPRPPSVLVEQLRDY 760 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY----------QPGERQSYAR 804 + L + + + A LT H PF P+ + +Y Sbjct: 761 LAAGWQ---AAPLGTEPATTGLLAALTTEHPLQPFSPRYFSRAPDARPQPDQPPLFTYDS 817 Query: 805 EWLPAASQAGKAHSEFVQPLPFTL--PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 +W TL RF P F RL+V F D Sbjct: 818 DWRAIHDATDPPAEPAAALPLPLPDWDGRTDAVTLARFLRQPAATFLHGRLKVRFGELDE 877 Query: 863 EIPDTEPFILEGLSRYQINQQLLNALVE------QDDAERLFRRFRAAGDLPYGAFGEIF 916 D EPF L+ L+ +Q+ +LL A+ + + R G LP+GA G Sbjct: 878 LAED-EPFALDPLATHQLKSRLLEAVRDVPEAETGRHWQAAATRLTEEGGLPFGAAGAQL 936 Query: 917 WETQCQEMQQLADRVIA-----------------CRQPGQSMEIDLACNGVQITGWLPQV 959 + + L Q+ + C+G + Sbjct: 937 LQACHAPVMALRQNWHRLDDLTDLPPLTLPPLLLPLAGDQTATLLAHCDG--LQAVAADS 994 Query: 960 QPDGLLRWRPSLL--------------SVAQGMQLWLEHLVYCASGGNGESRLFLRKDGE 1005 P R L + + W HL A+G L + + Sbjct: 995 PPLRRRVMRTGRLADSAGRGADTRWIPRLHTLVGFWPAHLALQAAG-LAIPTLIVGETVT 1053 Query: 1006 WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQ 1065 + PL A++A H L L +R+ PL + ++ G WL+ Q Sbjct: 1054 LQLAPLPADEARHCLQVLAGYWRQAHGEPLPLPCKTAGVWLQ-----------------Q 1096 Query: 1066 KARTKFLQAYEGNMMVRGEGDD-IWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 + + QAYEG GE + RL+ + + + PL Sbjct: 1097 QDASAARQAYEGGYHSTGERAESPALARLFPAFEDLDLARLDALATDLYAPLLA 1150 >UniRef50_A4VRQ6 Exodeoxyribonuclease V gamma chain n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VRQ6_PSEU5 Length = 1092 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 381/1143 (33%), Positives = 563/1143 (49%), Gaps = 84/1143 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +YH+ L+ L + + + L DPF P ++V S GM +WL + L+++ GIA + Sbjct: 1 MLSLYHAPDLETLGE-LATTLLAQPLADPFAPARVVVPSQGMGRWLTLELARRQGIAMQL 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 + LPA+F+WD+ VL +P++SAF+ +++W+L L + E L YL D D Sbjct: 60 ELQLPAAFVWDLSRTVLGSLPEQSAFSPTTLTWRLYGWLCEPANLELAPRLAQYL-DGGD 118 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 +R+ L++K AD+FDQYL+YR DWLA WE G ++ LG +AWQA LW+ L + Sbjct: 119 ERRRLSLAAKIADVFDQYLLYRDDWLAAWERGETLD-LGPDEAWQALLWRELTKD----- 172 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 HRA L ++ L P LP R+ + GIS+LPP +L+ L L +HI++ + Sbjct: 173 -GHPHRARLLGDLLQRLYR-DEPLPDLPERLLVFGISSLPPHHLRVLDGLARHIDVVVCA 230 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NP R WG+I+D LA+ + D DVG+PLL Sbjct: 231 LNPSREAWGEIRDIRELARQP-----------------------ESGVDDWYLDVGHPLL 267 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAF------VDVTPDNLLHNIQSDILELENRAVAGVN 354 AS GK GRD+ L L +S+ F D+ D+LLH +Q+DIL L R Sbjct: 268 ASLGKQGRDFFDSLFSLTASEGSQEFGLYSEDEDLHDDSLLHALQNDILRLRTRLP---- 323 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 D + L D S+ H+ HSP REVE+LHD+LLA DP LTP ++V+ D Sbjct: 324 -------DERISLAENDRSLEVHIAHSPLREVEILHDQLLARFAADPALTPDQVVVLTPD 376 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 I+ Y+PFI+AVF +PY+++DR R P++EAF+ LL L SRF +E++LA L Sbjct: 377 IERYAPFIEAVFAPREGSPRIPYSLADRSLRAEVPLIEAFLELLLLAQSRFAAEEILAWL 436 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + P +A R I E L LR W+ E+G+RWG D + L LPA TWR GL R+LLG Sbjct: 437 EQPAIARRAGIESEDLPLLRDWLREAGVRWGRDGEQRARLGLPAEPAFTWRQGLDRLLLG 496 Query: 535 YAME-----SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 +A P D G +L+G L + +L LA+ RPL EW Sbjct: 497 FAAPPQLAGDRAPLLGEHWPLDALEGARGQLLGRLVGFVERLGSLADQLARPRPLAEWAD 556 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 + +++ F + E + L+ Q A+ + A + L L+ +L+ L Q Sbjct: 557 DLQVLIDTLFD-EREAGETLLLLSQACAALRDQAQAADLTRPIELELVHQQLSAALQQGG 615 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 + FL G V CT++PMRS+PF+VVCLLG++DG +PR+ P GFDL+ + P+RGDR+RR Sbjct: 616 GASGFLTGAVTFCTMVPMRSLPFRVVCLLGLDDGAFPRRTPPSGFDLIGRHPRRGDRARR 675 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 DDRYL LE L+SA+Q LY+SY+GR +DN+ PSVL+ E+++ + D Sbjct: 676 LDDRYLLLETLLSARQALYLSYVGRDPRDNAVLPPSVLLSEVLEAV--------DMTAVL 727 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP 829 + V + H PF P+N+ Y+ W AA + + QP L Sbjct: 728 ADGARPVSQKILIAHPLQPFSPRNFGEAPCAGYSLPWFRAAQRLAEPPQAQAQPFASLLA 787 Query: 830 ET------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 E + L + + HP R + RL + + + EPF LE + + + Sbjct: 788 EPDEAWLTIEPSQLLQCFRHPARFLLEQRLGLRLADDQESLASDEPFDLEMPAWNGLRRL 847 Query: 884 LLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR--QPGQSM 941 L A+ ++ E R AAG LP G G+ W ++ A R+ R + + Sbjct: 848 SLQAMEQRWSDEEERRMACAAGWLPTGELGQALWGKLRGPVRAFAPRLFELRPDAVPEPL 907 Query: 942 EIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV--YCASGGNGESRLF 999 +D+ GV++ GWL V P GL W+ L WL HL+ CA+ G L Sbjct: 908 PVDINLAGVRVHGWLDGVTPGGLFGWKLGRLGEWDLPPFWLRHLLLNLCATPGIERHSLM 967 Query: 1000 LRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLD 1059 L G+W+ PLA A L + YR + PL +LP S A+ + + Sbjct: 968 LSPAGDWQLGPLA--NAAELLEPWLVAYRSAIREPLPLLPRSSQAFARGYRKPSRGS--- 1022 Query: 1060 DDSTLQKARTKFLQAYEGNMMVR--GEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLF 1117 L AR + +A+ G E +D W +R P E +++ + P Sbjct: 1023 --EPLDCARKRAREAWFGAEFSPIAAEAEDPWNALAFRDSDPL-DERFETLAEQLIGPAL 1079 Query: 1118 RFN 1120 Sbjct: 1080 DAL 1082 >UniRef50_A1KVC5 Exodeoxyribonuclease V n=23 Tax=Neisseria RepID=A1KVC5_NEIMF Length = 1069 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 334/1129 (29%), Positives = 520/1129 (46%), Gaps = 93/1129 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +Y SNRL+ L AL I + + L +PE I+VQS GM ++L L++ G+AAN+ Sbjct: 1 MFYLYQSNRLETLAALFARIQKVKPLKSALQPEQIIVQSQGMRRYLNTCLARDLGVAANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLP--QLLEREDFTLLRHYLTD- 117 F LPA W + +++P IP+ S F + M W+L+ L +F +R+ L D Sbjct: 61 SFSLPAGLTWKLMKKLIPGIPELSPFAPEVMRWRLLDLFRSEAFRNTAEFEDVRNVLQDY 120 Query: 118 -DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYT 176 S + +QL+ + AD+FDQYLVYRP W+ W+ G + GLG+ + WQ+ LW+ Y Sbjct: 121 LGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRRL-GLGDDEIWQSKLWR----YL 175 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 Q HR L+++ + L+ LP R F+ GIS + P+YLQ L L +H ++ Sbjct: 176 DDGRQSAPHRVALWEKLLAALDKDK-----LPERYFVFGISTMAPMYLQLLHKLSEHCDV 230 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 + NP YWG++ + A + K G Sbjct: 231 FVFALNPSGMYWGNVIEAAQILK--------------------------GGGDPDLTQAG 264 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 +PLLAS GK GRD+ L+++E E F + D LLH +Q+DI L+ + + Sbjct: 265 HPLLASLGKQGRDFFDFLNEMEIEGETPVFEEGGRDTLLHALQTDIQNLKMPSENVGS-- 322 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 ++ D SI HSP RE+++L D+LL +L E P P DI V+ I+ Sbjct: 323 ----------VNTGDGSIRIVSAHSPLRELQILKDKLLKILHEHPDWQPHDIAVLTPHIE 372 Query: 417 SYSPFIQAVFGSA-PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 SY+PFI+AVFG A P + LPY++SD + + P+ A L L +SRF + VL LL+ Sbjct: 373 SYTPFIEAVFGQAQPGAQALPYSVSDVKISRRQPLFHALSCLFDLLESRFEVDKVLVLLE 432 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 + RF +TE+ L L V + + WG+D + TW+ + RM+LG+ Sbjct: 433 TAPVLRRFGLTEDDLPLLHDMVADLNVHWGLDGEMRG----GTDQLFTWKQAVERMILGW 488 Query: 536 AMES-AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 + WQ V + A L G A+LL L+ R Q + EW+ CRD+ Sbjct: 489 MLPEGGNPMWQDVSAWYADVNQTA-LFGRFAALLETLSDIVRIWRQPATIGEWVARCRDL 547 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 L F +A+ + ++ +E +W AE AQ+ +P + + + LD E F Sbjct: 548 LETLFQAEADDQKSVQNLENEWVKWQAETELAQFSGQLPQQTVIRHIRRFLDSES-EAGF 606 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 L G + C+++PMRS+PFKV+CLLG+NDG +PR FDL+++ P +GDR+RRDDDRY Sbjct: 607 LRGGITFCSMVPMRSLPFKVICLLGLNDGDFPRNTKAAVFDLIAKHPAKGDRARRDDDRY 666 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 LFLEALISA++ LY+SYIGR I+ + E PS L+ ELID + + + Sbjct: 667 LFLEALISAREILYLSYIGRDIRKDEELAPSSLLGELIDTVAAMAGIGSRQ--------- 717 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGER-----QSYAREWLPAASQAGKAHSEFVQPLPFTLP 829 + + H F + +Q G R + F QP+ P Sbjct: 718 -LAQNWIEQHPLQAFSRRYFQEGGRSDGIFGTRTDYATALGQTPEPPQPFFDQPVENAEP 776 Query: 830 -ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 + + RFW +PV+ + Q +L + EPF + QI + + A Sbjct: 777 VAEIGQDEFIRFWRNPVKVWLQQQLAWSEPHIGEAWEPAEPFEPQHAD--QIAETYIEAR 834 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN 948 E D + R A LP G G W+ Q + D + + + + Sbjct: 835 REGRDFAQTAARIGAESLLPSGELG-RLWQQNFQTAAKQIDTAVLNSPKLPPLSYAIPSD 893 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCA---SGGNGESRLFLRKDGE 1005 G + G L + G + + + Q + LEHL++CA S ++ Sbjct: 894 GQILKGSLGNLYRCGQVFYAYGKPNAPQRIAFLLEHLIFCAVMPSEAETRQTFIVQSGET 953 Query: 1006 WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQ 1065 +A ++AL LS+ + + G + PL ++ A + Q+ + Sbjct: 954 EILAEIAQDRALQLLSEWMAFFNIGQNRPLPFFAKTSLAAAEAFAQKQD---------WE 1004 Query: 1066 KARTKFLQAYEGNMMVRGEGDDIWYQRLWRQL--TPETMEAIVEQSQRF 1112 A K AY GN + +G+ D ++ P ++ Sbjct: 1005 AALKKAQTAYYGNKVSKGQKDYTEVALVFGNASQNPLEQPLFENLARLL 1053 >UniRef50_C7LVF8 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVF8_DESBD Length = 1064 Score = 697 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 342/1133 (30%), Positives = 538/1133 (47%), Gaps = 93/1133 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 ++ SNRL+ L L+ +++ DP EPE ILVQS GM +W+ M L+++ G+ AN Sbjct: 4 FLLHASNRLENLAELLAEVLKT--PLDPMEPETILVQSGGMQRWVSMQLARRHGVCANTR 61 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 FP P F + + + ++P+E +++ M W++ LL LL+ +F L Y+ +DS + Sbjct: 62 FPFPVGFAYALCRELRADLPREYPLSQERMLWRITHLLRGLLDEPEFAPLARYVQEDS-E 120 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL-----VEGLGEAQAWQAPLWKALVEYT 176 + QL+ + A FDQYL++RP+W A+WE + G ++AWQA LW+ L+ Sbjct: 121 LRSVQLAERIAYHFDQYLIFRPEWAARWENHEPSGNFLLPGHVASEAWQARLWRELIRDM 180 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 HRA L +R I +LE T+ P LPSRV + GI LPPVYL L+AL +H ++ Sbjct: 181 GG-----EHRAALLRRAIASLEKGTSLP-DLPSRVCVFGIPTLPPVYLDLLKALSRHSQV 234 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 H+ +PC+ YWGD+ + S E E + Sbjct: 235 HVFLLSPCQKYWGDLLTHRERRRAYRAGEHASPERPEDAMP------------------- 275 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 LA G +G++++ LL + + + E + + D +L +Q+D+L+L+ R Sbjct: 276 ---LAGLGAVGKEFLELLMERD-ALETGLYEEPVGDTMLGQLQADLLDLDVREEKTDF-- 329 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 D+SI H CHSP RE+E+L D +L +L +D +L+P+DI+VM DI+ Sbjct: 330 -------------SDTSIQVHCCHSPLREMEILKDLILDLLAKDTSLSPQDILVMNPDIE 376 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y+P IQAVFG+A D +P++ISDR+ ++ + F+ LL RF + V ALL+ Sbjct: 377 RYAPVIQAVFGTAGED-GIPFSISDRKPTKAAETIRLFLELLEFGQHRFEASRVCALLEA 435 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + R + + + +WV SG+RWG+D D R+ L GQ+TW GL+R+ LGY Sbjct: 436 PPVRQRLGLDASDTQRVLEWVRASGVRWGLDLDFRRKAGLGDFGQNTWESGLSRLYLGY- 494 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 M A + P EL+G + + + +L L R +W +L+ Sbjct: 495 MTGAADPLGGIAPLALRGSAEQELLGRVTAWIDELATLWSRLRDTRTPADWQDCLLWILD 554 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 AFF D + I + + + + + +RLD+ FLA Sbjct: 555 AFFPQDPAQAEHLLAIRKAVTDLTRDM----GDFEADARTMLYLIRKRLDESGGESGFLA 610 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 + C L PMRSIPF+V+CL G+ +PRQ PLGFDLM+ +P+ GDRS R+DDRYLF Sbjct: 611 SGLTFCGLKPMRSIPFRVICLTGLTSTAFPRQDIPLGFDLMAARPRPGDRSHREDDRYLF 670 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 LE++ISA+ L ++Y G S DN E PSVLV EL+D++ + + G Sbjct: 671 LESIISARDNLILTYPGLSQSDNLEAPPSVLVSELLDFLDRGCTVDG----------LTP 720 Query: 777 KAHLTCLHTRMPFDPQNYQPGE-RQSYAREWLPAASQAGKAHSEF--------VQPLPFT 827 + H F P + G SY+ + AA H ++ Sbjct: 721 SEAIVFKHKLQAFHPDYFSAGSPIFSYSAQNRDAAQALFAEHQSRQFFPEASTLEGAHAE 780 Query: 828 LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI-LEGLSRYQINQQLLN 886 + +E L RF HP R + L+++ + + D EP GL Y Q LL Sbjct: 781 QEIEIDIEELTRFLTHPCRHLLR-ALRIDPTGGEDDFLDEEPLATPTGLEAYGPLQDLLR 839 Query: 887 ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEID-- 944 +++ A L A LP G G C +++ LAD+ A + + +D Sbjct: 840 TALDE-PAANLEGLLLAWQLLPPGQAGTDASRKLCSQIRALADQARAVIGDEKPLRLDLK 898 Query: 945 LACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDG 1004 L + +TG + + D + RP+ + ++LW+ HL A+G +S D Sbjct: 899 LPLGRITLTGRID-LHGDRFVTCRPAKTKSSDMLRLWVRHLAASATGHAVQSMHIGTDD- 956 Query: 1005 EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTL 1064 FP A A + L L+ Y GM AP+ + P + A+ + + + + Sbjct: 957 --CFPAPEAPNARNLLEGLLRLYTRGMRAPIHLFPRTSLAFAEARFTGRKPKERPE---- 1010 Query: 1065 QKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLF 1117 A + ++ +EG MV E DD L+R P E + ++ P+ Sbjct: 1011 --ALMQAMRQWEGGYMVSPERDDPHLAFLFRDTEP-DWERFADVAEEIYGPIL 1060 >UniRef50_C5JAU6 DNA helicase/exodeoxyribonuclease V, gamma subunit n=1 Tax=uncultured bacterium RepID=C5JAU6_9BACT Length = 1183 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 396/1199 (33%), Positives = 557/1199 (46%), Gaps = 127/1199 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG------ 55 L + H NR+++L + RE P E E+ILVQS GMAQWL++ L++ G Sbjct: 10 LTLIHGNRIELLRDDLVDRFRREPSA-PLESEIILVQSNGMAQWLKLGLAETGGRGGGGG 68 Query: 56 ----IAANIDFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFT 109 IAA ++ LPA F+W ++ VL E +P+E+ F+K + W+LM LLP + E F Sbjct: 69 SGLGIAAALELLLPARFLWRIYRSVLGEAAVPEETPFDKTRLVWRLMRLLPGIAAEERFA 128 Query: 110 LLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEA 161 LRH+L D+D+RK +QLS + ADLFDQY VYR DWLA W G + + E Sbjct: 129 PLRHFLRQDADQRKCYQLSVRLADLFDQYQVYRADWLACWAKGEDLLIDARGRRSAIPEE 188 Query: 162 QAWQAPLWKALVEYTHQLGQPRW----HRANLYQRFIETLESATTCPPGLPSRVFICGIS 217 Q WQA LW+ L+ + G RA ++ F+ + P GLP RV + GIS Sbjct: 189 QRWQAALWRLLIADVARTGAGVDAVSGGRAEVHAAFLRRARTEDLLPAGLPRRVTLFGIS 248 Query: 218 ALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLF 277 ALP L+ L AL + ++ + NPC++YW D+ L + QR + E Sbjct: 249 ALPYQSLEVLMALSRWTQVLMYVHNPCQHYWADVIAGRELFRARRGQRGGAHGVAEPV-- 306 Query: 278 RDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL---------ESSQELDAFVD 328 PLLA+WG GRD+I LL D D + Sbjct: 307 ----------PEALLHLHAQPLLAAWGMQGRDFIGLLEDAVGEGALWAEGEPLAFDVERE 356 Query: 329 V-------TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHS 381 LL +Q DILEL R+ D S+ FHV H Sbjct: 357 ACFVARGGAAGTLLQQLQEDILELRPLDET--------RALWPPVDAQQDRSLCFHVAHG 408 Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP--ADRYLPYAI 439 QREVE+LHD+LL L DP+L+PRDI+VMV DID+Y+ IQAVFG R++P+ + Sbjct: 409 AQREVEILHDQLLDALNADPSLSPRDILVMVPDIDAYAAHIQAVFGLHGANDPRFIPFVV 468 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 +R R++ +L LL L +R + D+L L++P L RF I E L LR+W+ + Sbjct: 469 VNRTRRKADLLLMTLERLLGLARARVTANDLLDWLELPALRRRFGIAEADLPLLRRWIRD 528 Query: 500 SGIRWGIDDDNVRELE-------LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 SGIRWG+D + + +HTWRFGL RMLLGYA+ W + P+DE Sbjct: 529 SGIRWGLDASHCGAVLGVPGGEIDGTRTRHTWRFGLERMLLGYAVGDRGAPWCGIAPFDE 588 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 EL+G LA L+ + R + + W R +L FF P+ E A TL+ Sbjct: 589 IGLGDGELLGRLADLVAAVEATWRQMKSAATVAAWCGRLRGVLARFFAPEEEDADAYTLL 648 Query: 613 E--QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 A A AQ D +P++++ + L++ +SQ F AG V TLMPMR+I Sbjct: 649 RLDAHLDAWEALCAEAQLVDPLPVTVVGEYWLSCLEEGGLSQGFFAGAVTFATLMPMRAI 708 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 PF+ VCLLG+NDG +PR + FDLM + + GDRSRR+DDRYLFLEAL+SA+++L + Sbjct: 709 PFRQVCLLGLNDGAFPRPGNRIDFDLMGGRYRPGDRSRREDDRYLFLEALLSARERLALF 768 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 ++GR I DN+ PSVLV +L D++ L G S + A LT H PF Sbjct: 769 WVGRGIHDNAVAPPSVLVGQLRDHLAAGWRLAGGADPAGG-SGQALVAALTVEHPLQPFS 827 Query: 791 PQNY-----QPGERQSYAREWLP---AASQAGKAHSEFVQPLPFTLPETVPLETLQRFWA 842 + +YA EW P A + A P T E + L L R + Sbjct: 828 RDYFCRGAETDARLFTYAHEWRPAREAGAPAALPVGSVPLLPPVTREEPLRLVELARLFK 887 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFR 902 PVR FFQ RL V F E + D EPF L+ L +Q LL A E D +R R R Sbjct: 888 DPVRGFFQQRLGVRFEREALFLDDHEPFDLDALEHWQSIDALL-ACREPDALDRGLERLR 946 Query: 903 AAGDLPYGAFGEIFWETQCQEM-------QQLADRVIACRQPGQSMEIDLACNG--VQIT 953 +G LP G GE E + + Q L R ++ +G V + Sbjct: 947 LSGVLPAGGQGEHLAEALRETLTRLNGQEQALLARWSGEEIGERTFRFARQIDGRSVAVV 1006 Query: 954 GWLPQVQPDGLLRWRPSL----------LSVAQGMQLWLEHLVYCASGGNGESRLFLRKD 1003 L V+ + R + ++ W+EHL + G G + + L +D Sbjct: 1007 DSLRGVRRGNGVLGRIVRTASRVLNAGVIRPEVLIEAWVEHLAWQMRLGAGIT-VVLGRD 1065 Query: 1004 GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDST 1063 G PL+ + A L L+ + +GM PL LP G A Sbjct: 1066 GGIELAPLSRQAAGMALEALLAAWWQGMRHPLAFLPGVGWAGFDGV-------------- 1111 Query: 1064 LQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETME-AIVEQSQRFLLPLFRFNQ 1121 +KA F + + +R++ T + + S+ L PL + Sbjct: 1112 -EKAEKAFERI---------RVHHPYVRRVFVDFTAFAASGELEQWSEALLRPLREAAR 1160 >UniRef50_C5TL47 Exodeoxyribonuclease V, gamma subunit n=3 Tax=Neisseria RepID=C5TL47_NEIFL Length = 1099 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 316/1137 (27%), Positives = 521/1137 (45%), Gaps = 99/1137 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M ++ S+RL+ L + I + LD E ++VQS GM ++L + +++ G+AAN+ Sbjct: 1 MFYLFQSDRLESLAEMCARIHQASPLDSVLAQEEVVVQSQGMRRYLNVFFARELGVAANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLER--EDFTLLR----HY 114 F LPA W + +++P++P S F+ + M W+L+ L + + ++ +R Y Sbjct: 61 KFSLPAGLAWQLMRKLVPDVPPLSPFSPEVMRWRLLDLFRSEMFQTAPEYENVRLKLESY 120 Query: 115 LTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 L + +QL+ + AD+FDQYLVYRPDW+ W+ G L+ GLG+ + WQA LW+ Sbjct: 121 LYSSASAD--YQLAGQMADIFDQYLVYRPDWIDAWQAGKLL-GLGDDEDWQARLWR---- 173 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 Y Q HR L+++ + L+ LP R+F+ GIS + P+YLQ L + KH Sbjct: 174 YLDDGSQSALHRVALWEKLLAQLDK-----SVLPQRLFVFGISTMAPMYLQLLHQISKHC 228 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 ++ + NP YWG++ D A + K + Sbjct: 229 DVFVFALNPSSQYWGEVIDEAQILK--------------------------RGDEADLSQ 262 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 G+PLLAS GK GRD+ LS++E+ Q++ + + D LLH +Q DI L + Sbjct: 263 AGHPLLASLGKQGRDFFDFLSEVETEQDIQVYEEGKDDTLLHCLQKDIQNLIMPSERLYQ 322 Query: 355 IEEFSRSDNKRPLDP----------------LDSSITFHVCHSPQREVEVLHDRLLAMLE 398 EE + + D S+ HSP RE+++L + L +L+ Sbjct: 323 QEEGEAGGQQALVQVHDADGNPVCVEPDKLLNDGSVKIVAAHSPLRELQILKEELSLVLQ 382 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA-DRYLPYAISDRRARQSHPVLEAFISL 457 +P P DI V+ +I+ YSPFI+AVFG A A + LPY+ISD + + P+L A Sbjct: 383 NNPDWQPHDIAVLTPNIEPYSPFIEAVFGQAHAGSQALPYSISDVKLSRRQPLLYALAQT 442 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L L +SRF + VL LL+ ++ RF ++EE + L + V + WG+D Sbjct: 443 LDLLESRFEVDKVLPLLESRLVLQRFGLSEEDVPLLHETVAGLNVHWGLDQTMRD----G 498 Query: 518 ATGQHTWRFGLTRMLLGYAMES-AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 TW+ + R+ LG+ + G W+ V + + ++ A + L Sbjct: 499 KDNLFTWQQAVERLALGWMLPEGGNGMWRGVSAWYSNVN-QLDVFSGFAEFIRTLADMAA 557 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 +E W+ CRD+L F PD + + A EQ E A++ +P Sbjct: 558 QWQAPANVEIWVQRCRDLLEKLFAPDTDDQYAKQQFEQSLAKWQEEAQLAEFDGLLPCKT 617 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + + + LD E FL+G + C+++PMRS+PFK+VCLLG+NDG +PR FDL Sbjct: 618 VIRHIRRFLDSES-QAGFLSGGITFCSMVPMRSLPFKMVCLLGLNDGDFPRNTKAAVFDL 676 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 +++ PK+GDR+RRDDDRYLFLEALISA++ LY+SYIGR I++++E PS L+ EL+D I Sbjct: 677 IAKHPKKGDRARRDDDRYLFLEALISAREMLYLSYIGRDIRNDAEFAPSSLISELLDTIA 736 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE----RQSYAREWLPAA-S 811 +S + H F + +Q S +++ A Sbjct: 737 AMTG----------KSGRELSEKWVKHHPLQAFSRRYFQKDALSDGLFSTRQDYADALNQ 786 Query: 812 QAGKAHSEFVQPLPFTLP-ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 +A F++ L P +T+ L FW +PV+ + + L + D EPF Sbjct: 787 PPAEAQPFFLEALSQEEPGKTIHQGELVSFWRNPVKVWLKKNLSWDQPYLDGAWESAEPF 846 Query: 871 ILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR 930 +I L+A + +D E R A +P G G + W+ Q Q + D Sbjct: 847 E--PQHEGRIADAYLDARRKGEDFEDTAIRLNAESLMPVGELGGL-WQKQYQISAKNVDT 903 Query: 931 VIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCAS 990 + S + + + + G + + G + + + + LEHL++CA Sbjct: 904 ELIRSNKRPSEPYEESFGDLVLQGTIGNLYECGRIVFLNQKDNAPNRIARLLEHLIFCAV 963 Query: 991 GG---NGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLK 1047 + + + E A L + + +R G + PL ++ A + Sbjct: 964 APKSVANRQTHIVSLGQTETYAAIGQEAARELLKEWLVYFRIGQNTPLPFFAKTSLAAAE 1023 Query: 1048 TCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEA 1104 ++ A K + + GN M +G+ + + ++ L ++ Sbjct: 1024 EYNKKED---------WDAALRKAHEVFNGNKMSKGQKEYTEVKLVFGHLEESPLDE 1071 >UniRef50_C7I4N7 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Thiomonas intermedia K12 RepID=C7I4N7_THIIN Length = 1173 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 378/1203 (31%), Positives = 553/1203 (45%), Gaps = 142/1203 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L + NRL++L + + ++ L P E E+ILVQS G A+WL+M L+ + GI A Sbjct: 9 LFILQGNRLELLRDALLEWLAQQPLA-PLEEEVILVQSNGAAEWLKMALAAQGGICAATR 67 Query: 62 FPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQ------------------ 101 LP F+W + +VL P +S +K ++W+LM LL Sbjct: 68 VELPGRFLWRTYRQVLGRAATPSQSPLDKPLLTWRLMRLLGAPGAELHPARPPWESRKLG 127 Query: 102 ---------LLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETG 152 L+ + L YL D + QL+ + ADL+DQY +YR DWL W G Sbjct: 128 AAQRFLEGGTLDADVCAPLLQYLQGQ-DLLRRLQLAQRLADLYDQYQIYRDDWLDAWAQG 186 Query: 153 HLV--------EGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTC- 203 V L E Q WQA LW+ ++ + + + RA + + ++ L +A Sbjct: 187 RDVLIDALGRATPLPEDQRWQAWLWRRVLAELSE-AERQSTRAQVQRAMLQALNTADIAA 245 Query: 204 ---PPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKL 260 P LP RV + G S LP V L AL AL +++++ + NPCRY+W DI + L + Sbjct: 246 DPTRPALPRRVVLFGASHLPTVVLDALVALSRYVQVLIALPNPCRYHWADIIEGRELLRA 305 Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESS 320 +R D + +PLLA+WG+ GRD++ L + Sbjct: 306 APARRPLRAGDLAQVSL------------EVMHAHAHPLLAAWGRQGRDFMRQLDAFDER 353 Query: 321 Q---------ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 D F D D LL +Q+ I +L ++ + D Sbjct: 354 ANAADRPGLPRHDLFDDAPGDTLLEQMQAAIRDLLPL-----------PEHSRTLISAAD 402 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEE---DPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 S+ FH+ HS QREVE+LHD+LL +L + L PRDI+VM DI ++P I+AVFG Sbjct: 403 RSVVFHIGHSAQREVEILHDQLLHLLAQPSGGRPLRPRDIVVMTPDIAPFAPAIRAVFGQ 462 Query: 429 A--PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 +R++P+ I+D AR + P+L A LL LP R ++ D+ ALLDVP +A RF + Sbjct: 463 YPPGDERFIPFDIADLSARATEPLLLALDWLLRLPQERILASDISALLDVPAIARRFGLR 522 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPAT-GQHTWRFGLTRMLLGYAMESAQGEWQ 545 E L QW+ +G+RWG+D D+ L L A Q++WRFGL RMLLGYA G ++ Sbjct: 523 PEDRPRLTQWIVGAGVRWGLDVDHRAHLGLGACGEQNSWRFGLRRMLLGYAGAGEDG-FE 581 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 +++P+DE GL A LVG LA LL L W R Q +W RD+L+A LP Sbjct: 582 NIVPFDEIGGLDAALVGPLADLLDVLQAWWRTALQNATPGQWAQYARDLLDAISLPQDLR 641 Query: 606 EAA-MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 E ++ + AQ+ +AVPL +LR+ LD+ RFLAG V CTL Sbjct: 642 ERETRARLDDALSTWLDHCAAAQFDEAVPLQVLRESWLSGLDEAAGGGRFLAGGVTFCTL 701 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ--KPKRGDRSRRDDDRYLFLEALIS 722 MP+R+IPF+VVCLLGMN+G YPR+ FDL+ Q + + GDR+RR+DDRYL LEAL+S Sbjct: 702 MPLRAIPFEVVCLLGMNEGDYPRRSPHSDFDLLHQPGQYRPGDRARREDDRYLMLEALLS 761 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 A++ LY+S+ GRS +DN+E+ PSVLV +L DY+ G + A T Sbjct: 762 ARRMLYVSWAGRSPRDNTEQPPSVLVAQLRDYLAAGWQGEGQ---------GDLLAQRTT 812 Query: 783 LHTRMPFDPQNYQPG-ERQSYAREWLPAASQAGK-AHSEFVQPLP-FTLPETVPLETLQR 839 +H PF + ++ +YAREW A + P+P L E + L+ L R Sbjct: 813 VHPLQPFSRRYFEGDAALFTYAREWRQAHGGVAENGTGNGNGPMPFEPLTEPLSLQQLAR 872 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE------QDD 893 F +PV+AFF+ RL V F E D E F L+GL R+ + L++ + Sbjct: 873 FLKNPVKAFFRTRLDVVF-DELQTQDDDEVFALDGLDRHSLLSHLIDDPQAAVYEGIEAA 931 Query: 894 AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV-------------IACRQPGQS 940 R R+ + +G LP A G + QE L A Q Sbjct: 932 VARRVRQLQGSGALPMRALGSRVAQGLEQEALPLLRSWSELAQAYPQAVDKRALIVEHQD 991 Query: 941 MEIDLACNGVQITGWLPQVQPDGLLRWRPSL--LSVAQGMQLWLEHLVYCASGGNGESRL 998 + +D +G++ G P R + + W+ + A G+ L Sbjct: 992 LRLDDWLDGLRTGGQSPIWMQLNASRLSDGKAQARAEKLIDAWVRQMAASA-CGHAVQGL 1050 Query: 999 FLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAML 1058 + D P L +A +L L+ ++EGM PL + A LK Sbjct: 1051 LIGADARVDLPSLPPAEARDHLHTLLAAWQEGMRRPLPFTARTALAELKNRKG------- 1103 Query: 1059 DDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETME-AIVEQSQRFLLPLF 1117 + YEG GE ++ R + + + PL Sbjct: 1104 -------------QEVYEGGYCTSGEVEEPCLARTFPDFASLSADGRFETYLAELFRPLA 1150 Query: 1118 RFN 1120 + Sbjct: 1151 DWA 1153 >UniRef50_C8R0F3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0F3_9DELT Length = 1205 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 383/1200 (31%), Positives = 567/1200 (47%), Gaps = 104/1200 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L +Y SNRL+ L + ++ + P E ++VQS GMA WL +L+Q+FGI A+ D Sbjct: 25 LILYRSNRLEALLDCLAASLQDDPPP-PLSSECVVVQSRGMATWLGQSLAQRFGIWAHPD 83 Query: 62 FPLPASFIWDMFVRVLPEIPKESA-FNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FP P FI + E + F+++ ++ ++ LLPQLL R +F LR YL +D Sbjct: 84 FPHPRRFIERLLRAAAGEEAATATSFSRELLTLAILELLPQLLSRPEFAPLRRYLEG-AD 142 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 K QL+ + A +FDQYLVYRP+ + WE + WQA LW+ L + Sbjct: 143 DWKSLQLAERIAYVFDQYLVYRPEMVLAWEDRQAEP--EDDDRWQALLWRQLAQRFGS-- 198 Query: 181 QPRWHRANLYQRFIETLESATTC-PPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 A L+ + L+ P LP+RVF+ GI+ LPPVYL L K + HLL Sbjct: 199 -----PARLFHQAKGRLQQGDLAQPELLPARVFLFGITTLPPVYLDLLNEAAKLLPCHLL 253 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 P R YWGDI P +LL R P +++ D G+PL Sbjct: 254 LFAPARDYWGDILSPKAANRLLLRH---------HPPAANADEQHGRDFEHLHLDTGHPL 304 Query: 300 LASWGKLGRDYIYLLSDLES---SQELDAFVDVTPD-----NLLHNIQSDILELENRAVA 351 LASWG++GR++ +++ + D FV+ ++L +Q DILEL+ A A Sbjct: 305 LASWGEVGREFQHIMEERAEYLQPAHGDCFVNPATVEVAGASILARLQRDILELQEPAPA 364 Query: 352 GVNIEE---------FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 + + D SI H CHSP REVEVL D+LLAML + Sbjct: 365 AADQRNSAGDSPNPNNRLPEQAAGAVDHDHSIVIHACHSPLREVEVLQDQLLAML-DVEG 423 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGS-APADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 PRDI+VMV DI++Y+P I+AVF RY+P+ ++DRR + P+L+A ++LL L Sbjct: 424 YRPRDIVVMVPDIETYAPLIEAVFRRPTGDRRYIPFRLADRRVSREAPLLDALLNLLDLA 483 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 R VL L + F + L+ L QW+ + +RWGID+++ R + P Q Sbjct: 484 RGRLPLSQVLDFLAREPVRQGFGLDGRQLQRLEQWLEQLRVRWGIDEEHRRRHDQPPDRQ 543 Query: 522 HTWRFGLTRMLLGYAMESAQG-EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 +TWRFGL R++LGYA+ +LP+D+ G A+L G L L + + Sbjct: 544 NTWRFGLDRLILGYALPGEDRYLVAGILPFDDIEGQDAQLAGVLLQFSQALFSLVDEVRE 603 Query: 581 ERPLEEWLPVCRDMLNAFFLPDA----ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 + + W+ + R + AFF P+ + + A++ E A + L+ Sbjct: 604 AKTMARWVELVRRAMAAFFAPEERAAAGEQWQRQSLRDALVALLQESERAGLERPLELAA 663 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 L RLD+ ++ FL G + CT++PMR+IPF VVCLLGMNDG +PRQ P GFDL Sbjct: 664 FLRLLRARLDEAGMAAGFLEGGLTFCTMLPMRTIPFPVVCLLGMNDGDFPRQDNPAGFDL 723 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 ++ P+ GDRSRR DDRYLFLE+L+SA+++LYISY+GRSI+DN+E PS LV EL+D + Sbjct: 724 LAAAPRPGDRSRRRDDRYLFLESLLSARRRLYISYVGRSIKDNTELPPSPLVDELLDCLE 783 Query: 757 QSHYLPGDEALNCDESEAR---------VKAHLTCLHTRMPFDPQNYQPGE--RQSYARE 805 + + + + + +A H PF P+ +QP + +YA E Sbjct: 784 RMPEAVAESTADSEGTGEEERLADRRRRTRARFVVNHPLQPFSPRYFQPDQPLLFTYAAE 843 Query: 806 WLPAAS-------QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFR 858 + P S Q G P L L RF+ +P R + + L ++ Sbjct: 844 YAPVPSTRPVGTGQGGPDSPRPKAAATAPAPGAPTLAELHRFFRNPSRWYAEHHLGLSLP 903 Query: 859 TEDSEIPDTEPFILEGLSRYQINQQLLN------ALVEQDDAERLFRRFR----AAGDLP 908 + PD EP LE L Y++N+QLL A V + + RR R A G+LP Sbjct: 904 PGEEARPDREPVFLERLDAYRLNRQLLQDPASVLAAVNAGEDDEAGRRLRHLLAARGELP 963 Query: 909 YGAFGEIFWETQCQEMQQLADRVI--ACRQPGQSMEIDLACNG-VQITGWLPQVQPDGLL 965 ++ +A + +P ++ +DL + + G L GLL Sbjct: 964 LAGAAAPALAEAMAAVEPVAAFLATNPAGRPLPNLPLDLELGQHLYLRGELRDRAELGLL 1023 Query: 966 RWRPSLLSVAQGMQLWLEHLVYCASGGNGESR--LFLRKDGEWR--------FPPLAAEQ 1015 RWRP + WL+HL CA + L + + F +A EQ Sbjct: 1024 RWRPGRSKPVFLLLAWLDHLALCARAPADQDHQCLLVARGKGQDEGQADIRIFRAVAQEQ 1083 Query: 1016 ALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAY 1075 A L+QL++ +R G APL P AW Y A+ D ++AR LQAY Sbjct: 1084 AQSLLAQLLDLWRRGQEAPLPFFPACSHAWSDKIYQAKE---SDPAKLCRQARQAALQAY 1140 Query: 1076 EGNMMVRGEGDDIWYQRLWRQLTP--------------ETMEAIVEQSQRFLLPLFRFNQ 1121 G G+G D + ++++ P E ++ LP+ R + Sbjct: 1141 HGGDFHPGDGADPYVGLIFQEADPAGEWSEDDSSGPGGSDWEEFTAVAETVYLPMLRVLE 1200 >UniRef50_Q1QYD4 DNA helicase/exodeoxyribonuclease V, gamma subunit n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYD4_CHRSD Length = 1210 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 391/1209 (32%), Positives = 566/1209 (46%), Gaps = 100/1209 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M V H+N L+ L L ++ R R P PE LVQS GMAQWL++TL++ GIAA++ Sbjct: 1 MFSVIHANHLEDLGTLALDVIRRHR-QPPLVPETFLVQSNGMAQWLRLTLAEADGIAASV 59 Query: 61 DFPLPASFIWDMFVRVLPE-IPKESAFNKQSMSWKLMTLLPQLLERED-------FTLLR 112 DFPLP+SF+W + VL + IP++S F+K ++W+LM LL + L+ E + LR Sbjct: 60 DFPLPSSFVWRAYRAVLGDDIPEQSPFDKTPLAWRLMALLERCLDPETSPDDPTCYAPLR 119 Query: 113 HYLTDDSDK-------------RKLFQLSSKAADLFDQYLVYRPDWLAQWETGH-LVEGL 158 YL ++ + R+ + L+ + ADLFDQYL+YRP+W+ WE G L Sbjct: 120 DYLQGEALEASPLPGAAEEARERRRWHLAVRLADLFDQYLIYRPEWIEAWERGEHAPADL 179 Query: 159 GEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA 218 + Q WQ LW+AL+E HRA L++RF++ P +P RVF+ GISA Sbjct: 180 PDDQRWQPALWRALIEDA-PAAAREHHRARLHRRFLDAARGLRKRPRDVPPRVFVFGISA 238 Query: 219 LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFR 278 LP L+AL AL +++ L+ NPCR+YWGDI K R + ++E Sbjct: 239 LPAQTLEALHALSGVVDVFLMIANPCRHYWGDIVSDRDAIKRAGRLSSQARREQEARHPE 298 Query: 279 DSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ----ELDAFVDVTPDNL 334 A + + NPLLA WG GRD+I L + ES + E D F D+ P+ Sbjct: 299 APWLAE--LDEEALHLHANPLLAGWGTQGRDFIVGLYEFESDRGFDLETDVFRDMAPEQS 356 Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 +Q ++ E R R + D S++ HSP REVE+LHDRLL Sbjct: 357 PTLLQ---QLQQDVLELVHPGERARREGGPRRIAEDDESLSLVSAHSPLREVEILHDRLL 413 Query: 395 AMLEE----DPTLTPRDIIVMVADIDSYSPFIQAVFGSAP--ADRYLPYAISDRRARQSH 448 A E L PRDIIVMV DID Y+P I+AVFG P R++P+ I+D+ A ++H Sbjct: 414 AAFERAEAAGQPLRPRDIIVMVPDIDRYAPCIEAVFGQLPPSHPRHIPFTIADQVASEAH 473 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 P++ + LL LP+ R +VL L+VP F I E L LRQW+ SG+RWG+ Sbjct: 474 PLMALALLLLELPERRLTVSEVLDALEVPAFRTAFAIDEAELERLRQWLAGSGVRWGLSA 533 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQ-----------------GEWQSVLPYD 551 ++ L PA G+++WRFGL+RMLLGYA+ G++Q ++PY Sbjct: 534 EHRDSLGFPALGENSWRFGLSRMLLGYAVGEPSAGGARDDSEDSLGHAPSGDFQGIVPYA 593 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA-MT 610 E GL A+L G +A+LL L L + WL + + A P E M Sbjct: 594 EVGGLEADLAGRVATLLSTLEQQCAALGERLTPMAWLGRLQALFAACLQPGTADEHDVMA 653 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 ++ + A + + V L ++RD L LD+ ++QRFLAG VN TLMPMR+I Sbjct: 654 RLDAALARWAQQCRHADFEEPVGLGVVRDALRAELDEGGLAQRFLAGKVNFATLMPMRAI 713 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 PF+ V LLGMNDG YPR P FDLM+ +P+ GDRSRRDDDRYL LEA++SA+ KL +S Sbjct: 714 PFREVYLLGMNDGDYPRVRQPQDFDLMATRPRPGDRSRRDDDRYLMLEAMLSARAKLTLS 773 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 ++G ++DN+ R PSVL+ EL+D + Q +P D A + D AR+ L H PF Sbjct: 774 WVGHDVRDNTPRPPSVLIGELLDTLEQGWDVPEDGAGSRD---ARLARRLIETHPLQPFS 830 Query: 791 PQNYQPGE-RQSYAREWLP-------AASQAGKAHSEFVQPLPFTLPETVPLETLQRFWA 842 + ++ + R +Y W A+ + E + L LQR Sbjct: 831 RRYFERDDPRFTYEASWEALYATPEDTAAATADGAPSPDASMASLPDEPLSLGDLQRVLR 890 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFR 902 P + RL V++ D EPF L+GL + + ++LL+ + R R Sbjct: 891 RPWTVYLG-RLGVHYVDPHVPDEDNEPFALDGLEDHGLKRELLDGARGGVALASVAERLR 949 Query: 903 AAGDLPYGAFGEIFWETQCQEMQQLADRVI----ACRQPGQSM-EIDLACNGVQITGWLP 957 AG LP FGE E + + + + AC + + + + L Sbjct: 950 LAGRLPTAGFGEALIEPRLARLSRQVESWRRDVAACTAASPFLARFQGGASALTLEARLD 1009 Query: 958 QVQ--------PDGLLRWRPSLL---------------SVAQGMQLWLEHLVYCASGGNG 994 V P L+ P V + +L L+ A+ Sbjct: 1010 DVFAAPEDGAAPWCLMTLEPGHYGHLKVEGTGPHRHVGKVHRLYGGYLRWLLANATLEAP 1069 Query: 995 ESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQN 1054 S + +D P +AA A L+ ++ + P + E K Sbjct: 1070 CSWTAVFEDRCLSLPGMAAATARQQLATWLDAWARAYRMPWPAIGEVAQEIWKRVPRETC 1129 Query: 1055 DAMLDDDSTLQKARTKFLQAYEGNMMVRG---EGDDIWYQRLWRQLTPETMEAIVEQSQR 1111 +A+ + R + YE + D +LW V S Sbjct: 1130 EALQAGEPLESGLREALIARYETDAYAGPAALRARDGALGQLWPDFAAFEAAGGVAASLT 1189 Query: 1112 FLLPLFRFN 1120 PL Sbjct: 1190 LYAPLLDML 1198 >UniRef50_D0IXL5 Exodeoxyribonuclease V, gamma subunit n=4 Tax=Comamonadaceae RepID=D0IXL5_COMTE Length = 1195 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 350/1195 (29%), Positives = 537/1195 (44%), Gaps = 120/1195 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L H N+ + L + + L EPE++LVQS GMA+W +M ++++ G+ A Sbjct: 20 LIAIHGNQTEALADTVLAWLAAHPLQA-LEPEIVLVQSNGMAEWFKMRMAEQQGVCAAAQ 78 Query: 62 FPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 LPA F+W + ++L E+P+ES +K M W+LM LLPQ L F + ++L Sbjct: 79 VELPARFVWRSYRQILGRHEVPRESPLDKTPMIWRLMRLLPQCLGEPAFAPIANFLRP-G 137 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEAQAWQAPLWKA 171 + ++L QL+ K ADLFDQY +YR DWLA WE G V + E Q WQ LW+ Sbjct: 138 EPQRLLQLAEKLADLFDQYQIYRADWLAAWEKGEDVLRTAGRPDAPVPEGQLWQPQLWRK 197 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 ++ + + R L R ++ L+S L RV + G+S +P +Q L + Sbjct: 198 VLAELDE-QERAATRPALLARILDALQSGQPPVTPLARRVVVFGMSQMPLSLMQFLSGIA 256 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 +H ++ + NPCR++W D D L + R+ Sbjct: 257 QHSQVLIAVPNPCRFHWADAIDGRELLRQQRRRHADKGG-----------KDLAQIPLAA 305 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQEL---------DAFVDVTPDNL-----LHN 337 +PLLA+WG+ RDY+ L +++ ++ D + + L L Sbjct: 306 MHAHAHPLLAAWGRQSRDYVRQLDAFDTTGDIAVQWGWPRVDVYDEADASELIDAPLLVQ 365 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 +Q I +L + + D SI FH H RE+EVLHD+LL L Sbjct: 366 VQQRIRDLVPMSEH-----------PAVEIAAADQSIVFHKAHGLVRELEVLHDQLLQWL 414 Query: 398 EEDPT-----LTPRDIIVMVADIDSYSPFIQAVFGSAPA--DRYLPYAISDRRARQSHPV 450 E L PR+++VM+ I+ +P I+AVFG R++P+ I+D AR S P+ Sbjct: 415 AEPAAAGRAVLAPREVVVMLPSIEEAAPAIRAVFGQYGRHDARHIPFDIADVGARASSPL 474 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 + A LL LP R ++ LLDVP +AAR + + L L W+ +GIRWG++ Sbjct: 475 VTALQWLLKLPQQRCRLSELCDLLDVPAVAARVGLAADDLPQLTHWMAGAGIRWGLNHAQ 534 Query: 511 VRELELPAT-GQHTWRFGLTRMLLGYAME-------SAQGEWQSVLPYDESSGLIAELVG 562 +L L A ++ FGL RMLLGYA + + PYDE GL AEL G Sbjct: 535 RAQLGLAACGDPNSAWFGLRRMLLGYASGPALEAAFDEAQVFAGMEPYDEVGGLTAELAG 594 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM-TLIEQQWQAIIA 621 LASLL ++ W + A E W R +++ FF+ + + A+ ++ A Sbjct: 595 SLASLLGRMLQWWQTAATAAAPEVWAQRFRSLMDDFFVAQGDEDQALCAALDTALVGWQA 654 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 A + +PL + ++ Q L + ++QRF AG V CTLMPMR+IPF+VVCLLGMN Sbjct: 655 ACEQAGFEALIPLEVAQEAWLQALSEPALNQRFRAGGVTFCTLMPMRAIPFEVVCLLGMN 714 Query: 682 DGVYPRQLAPLGFDLMSQ--KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 DG YPR+ + FDLM+ + + GDR+RRDDDR L L+AL+SA+ KLYIS+ GR ++DN Sbjct: 715 DGDYPRRATRVDFDLMALPGQQRPGDRARRDDDRQLMLDALLSARSKLYISWAGRHVRDN 774 Query: 740 SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY-QPGE 798 SE+ PSVLV +L DY+ Q L+ E + A T H PF + Q Sbjct: 775 SEQPPSVLVSQLRDYLRQGWQGEDSAGLSASERGELLLAQRTRQHPLQPFSRSYFEQASG 834 Query: 799 RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFR 858 ++AREW A + V + L L F HP R+F + RLQV F Sbjct: 835 LSTFAREWYGAHEERAAQVLPVVAAFEPDPEVPLTLARLTEFLRHPARSFLRNRLQVRFE 894 Query: 859 TEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF----------RRFRAAGDLP 908 ++ + D E F ++GL+ Y + QQL + Q + + AG LP Sbjct: 895 QDEELLEDDELFSVDGLTAYGLIQQLQQGVRTQLAHDAELDVGLQVQRQVQCLGRAGVLP 954 Query: 909 YGAFGEIFWETQCQE----MQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPD-- 962 G E + + ++ + L V + W+ +Q Sbjct: 955 LAGLGRREAEVLQAQATPSLLAWQQQMRLWPHAAPRERLLLHSGAVTLDDWMDGLQEREE 1014 Query: 963 ----------------GLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEW 1006 L + L + + +++ L ++G + + +D Sbjct: 1015 PSSDAGHSRCWFALEPRTLLNKKGELQAHKLLPIYVRSLALSSTGSDTLMGVI-ARDTLV 1073 Query: 1007 RFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQK 1066 PL E A L L++ + G + PL + ++ A + Sbjct: 1074 WVQPLEPEAATQRLQALMQLWLTGQNEPLPLPLKAAIA------------------AGRD 1115 Query: 1067 ARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETME-AIVEQSQRFLLPLFRFN 1120 QAYEG M+ GE +D + R + T + +++ PL + Sbjct: 1116 ELNAAAQAYEGGYMLGGECEDPSWARCYPDWEALTADLRFHVLAKQVYGPLHDWL 1170 >UniRef50_Q480N8 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Colwellia psychrerythraea 34H RepID=Q480N8_COLP3 Length = 1198 Score = 662 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 325/1201 (27%), Positives = 550/1201 (45%), Gaps = 150/1201 (12%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M+ +Y +N+++ L L+ + + F E+I+VQ+ GM WL + ++Q+ GI+ N+ Sbjct: 1 MIHLYPANKMENLL-LLLNKISQLSPLGVFNQEVIVVQNAGMQHWLNLAIAQERGISMNM 59 Query: 61 DFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLL--PQLLEREDFTLLRHYLT 116 + LPA F+W + + + +P++S ++++ + W++ LL ++E +DF+ HY Sbjct: 60 RYALPAQFLWKLIRSLASDEKVPEQSPYSREVLCWRIHALLALDSVVEDDDFSQATHYWR 119 Query: 117 DDSD---------------KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGH-LVEGLGE 160 ++ + K +QL+++ ADL++QYL++RP WL W+ G+ ++GL + Sbjct: 120 GENTTDEEDNNTVNDSKHAQLKRYQLATQLADLYEQYLIFRPQWLDNWQQGNFELDGLEK 179 Query: 161 ----AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGI 216 WQ LW+ L+ H + + + +P R+ G+ Sbjct: 180 ISASEHKWQGKLWRLLIAQLPYNPVELMH---------DAIANIQDKKELIPPRISFFGL 230 Query: 217 SALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL 276 + + P++L + AL +H+E+H NPC YWGD+ Y L++ Sbjct: 231 NTMAPMWLNFINALSEHVEVHFFHLNPCFSYWGDVVTEKYALNKLSQW------------ 278 Query: 277 FRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFV--------- 327 + D VGNPLLA+ G+ GR++I +L D + +++ F Sbjct: 279 ----SDGVLPEELDVHSYVGNPLLANLGQQGREFISMLQDYS-TIDVELFEQAKSAQAIS 333 Query: 328 -DVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREV 386 + ++LH +Q+DILEL + D SI CHS REV Sbjct: 334 NNNDVTSVLHQLQNDILELSDARSPDDEAI-------TPKAVQHDDSIVITSCHSALREV 386 Query: 387 EVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS-----APADRYLPYAISD 441 + LHD LL +D +LTP+DI+VM I+ Y+P++ AVF A LP +I+D Sbjct: 387 QALHDYLLHQFNQDKSLTPKDILVMCPQIEQYAPYVNAVFTRGWQDIAGEVPPLPCSIAD 446 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 R A+ S P++ AF LL+LPDSRF +L+ L +P +A F I E L + W+ ++ Sbjct: 447 RSAKDSDPLVAAFTELLTLPDSRFGVSQLLSFLRLPAMANNFSINGEDLAKISAWLEQAT 506 Query: 502 IRWGIDDDNVREL-ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 + WG+D + + L A TW+ GL+R+L G+A ++ +Q L G + L Sbjct: 507 VHWGLDLTHKQSLLGQQANASFTWQQGLSRLLRGFAYADSEQIYQQQLLLSNVEGSDSIL 566 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET----EAAMTLIEQQW 616 +G L + QL+ + L + R +W + L+ F E ++ +IEQ Sbjct: 567 LGQLMLFIEQLHYFSENLQRSRTAIQWQTFLLEQLSHLFSRVDADNVSNENSLMVIEQAI 626 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 ++ A + D + L ++ D L+Q Q S++F+ G V C+++PMRSIPFKV+ Sbjct: 627 AGLVEHCHHAHFEDDISLLIVVDYLSQHFSQGDASKQFMVGQVTFCSMLPMRSIPFKVIA 686 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQ-KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 +LG+NDG +PRQ LGFDLMS K K GDRSRR DDRYLFLEA+IS++ LY+SY GR+ Sbjct: 687 VLGLNDGEFPRQRQALGFDLMSLSKAKLGDRSRRGDDRYLFLEAIISSRNSLYLSYQGRN 746 Query: 736 IQDNSERFPSVLVQELIDYIGQSHYLPGDEAL-----NCDESEARVKAHLTCLHTRMPFD 790 I++N+E+ PS++V+EL++Y+ Q + E N D++ A F Sbjct: 747 IKNNNEKQPSLVVKELMEYLAQGYGWQFSEEQLTSDNNNDDTNAESNQSGIYQLAMQAFS 806 Query: 791 PQNYQPGERQSYAREWLPA--------ASQAGKAHSEFVQPLPFTLPETVPLE----TLQ 838 P NY+ G S+ WL G+ + ++ L T +TV + L Sbjct: 807 PNNYR-GTWPSFDANWLALGQSSNSDNDESMGEGSTLAIESLAVTPEQTVEVSLSCQQLI 865 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDA---- 894 RF+ HP + F Q +L + F D + D EPF + L Y + Q LL+A + Sbjct: 866 RFYQHPAKMFAQQQLNLYFENHDVLLEDVEPFSVNHLQSYLLRQDLLSAALTGTIESPSN 925 Query: 895 ----ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSM---EIDLAC 947 E++ R +G P ++ ++QQ ++ + + + L Sbjct: 926 KDGSEQVITRAHLSGKFPDLPTTTNLFKDYQLDVQQFSEEISKVNCENPELIDCNLVLDI 985 Query: 948 NGVQITG-----------WLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGES 996 +G ++ G V+ + L+ +R S ++ + LV + Sbjct: 986 DGTEVDGPSAQKIRVSLNTKLAVKNNLLVHYRSSSAKAKDKFVMYFQQLVVQVWQDQAIA 1045 Query: 997 --------------------RLFLRKDGEWR-FPPLAAEQALHYLSQLIEGYREGMSAPL 1035 F K + F A L L++ + +G L Sbjct: 1046 NETNITDDNQRLQQVTETIGLYFNTKAQKVEQFNVANIADAKSKLINLVKMFFKGQQQVL 1105 Query: 1036 LVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR 1095 L+ G + + +++ +F + G+M RG DD + W Sbjct: 1106 LL----NGELADQVFTKKRGQLVEMTQA------RFEGLWIGDMSTRGLSDDDYLSYFWP 1155 Query: 1096 Q 1096 + Sbjct: 1156 E 1156 >UniRef50_C1SHH5 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHH5_9BACT Length = 1038 Score = 656 bits (1692), Expect = 0.0, Method: Composition-based stats. Identities = 267/1125 (23%), Positives = 483/1125 (42%), Gaps = 102/1125 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML++Y NRL+ L M+ + P I +Q+ GM +W+ + L++ GI+AN+ Sbjct: 1 MLKIYTGNRLERLLEKMDMNICSAG-SGPLTKVPICIQTPGMQRWIGIKLAELTGISANL 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAF-NKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 DF P + + + E ++ + K + WK+ + L L + + +R+YL D Sbjct: 60 DFIFPGALMKRLAGVGAGE---KAPWPEKNELVWKVYSKLNSLPSEQFYEHIRNYLEGDI 116 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEA-QAWQAPLWKALVEYTHQ 178 + + ++L+ + AD+FDQY VYRP + W + E WQ L++++ Sbjct: 117 NGIRAYRLAGRIADVFDQYQVYRPQMVLDWLSVKPKNPPVEDNDIWQMELFRSIF----- 171 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 + ++ +FI+ P L + + I GIS LP +++ L+A ++ +I+ Sbjct: 172 -PHGSGCKTTIFDKFIKNCTKGANNCPALKTPIHIFGISVLPAFFIEMLKAASQYTDIYF 230 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 +P R YWGD K +L ++ + + + Sbjct: 231 YLLSPTRQYWGDSKTIREKRRLEKITQKS--------------------AEELYIEEKHE 270 Query: 299 LLASWGKLGRDYI-YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 LL + G +GRD+ YL +S + + D+ +++L +Q++IL+LE Sbjct: 271 LLDNLGVIGRDFFDYLFGSDDSFLTEEEYFDIAKNSVLQTVQAEILDLEYGNEK------ 324 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 D+SI + CH+P RE+E L+D+LL + D TL P DI+VM DI+ Sbjct: 325 ----------PSHDNSIIINNCHNPLREMETLYDQLLELFNNDQTLRPSDILVMTTDIEK 374 Query: 418 YSPFIQAVFGS-APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y+P+I+AVF + +PY+I+D +Q++ F+ LLS F DV+ +L Sbjct: 375 YAPYIKAVFDNPYSERERIPYSIADVSEKQTNRPAGIFLELLSTLRGDFSLADVMRILSY 434 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 ++A +F I L L + +G W +++R+ L TW L R+ LG A Sbjct: 435 DLIADKFSIKRSDLSTLSTMLQNAGAMWSYGREHLRKEGLTIDDTFTWERALRRVALGLA 494 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 S+ + + L + +G L + + + E+ + EW + + + + Sbjct: 495 EGSSGSIYSEAAVKNVPFSLSVQ-IGGLMRFADLSSKYAEQMDSEKTIPEWCALMQALAD 553 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 + + + + + I E + +AVP + + + L + L + R ++ F++ Sbjct: 554 DYIKETFDNADDILHLSKCIADINTEAENGDFTEAVPAAPVLERLTESLSETRGAKGFIS 613 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 G V C ++PMRSIPF+V+C+ G+++ +PRQ L FDLM++ PK GDR+ RD DRYLF Sbjct: 614 GRVTFCAMLPMRSIPFRVICVAGLDENTFPRQKVSLEFDLMAKSPKPGDRNNRDSDRYLF 673 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 LE LISAQ L +SY G+S +DN+E PS L+ EL ++ + Sbjct: 674 LETLISAQDTLILSYTGQSERDNAELLPSTLITELNTHLKGRFGIED------------- 720 Query: 777 KAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ---AGKAHSEFVQPLPFTLPETVP 833 +T F + + +Y+ + + H P+ +P+ V Sbjct: 721 ---ITLKQKLHSFSRDYFSNEKLFTYSSDKYNTSRAFSSEKTGHRFSTLPIEVQMPDEVS 777 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD 893 L + F+ P F + L++ + D +P+ E + L +Y+I L +E D Sbjct: 778 LADFENFFISPPDYFLRKVLEIRPKLRDESLPENEIMCPDPLLQYKIIDNALRERLEGKD 837 Query: 894 AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP-GQSMEIDLACNGVQI 952 + LP G + +L V + +ID A +G+ I Sbjct: 838 PDNALEYLYKTAQLPPENLGRLSITETLNTSMELNRTVTETLGGTPEEQKIDSAIDGLHI 897 Query: 953 TGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLA 1012 +G + V + + +P+ + ++ W+ HL+ C + PP Sbjct: 898 SGTIFGVSGNRYVYAKPASIKPKDIIRGWIRHLLLC--QKASITTTLCGGGNTVEIPPAD 955 Query: 1013 AEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFL 1072 + +L+ L+E ++EG +PL G L + +S Sbjct: 956 S----GHLNNLVEIFKEGHKSPLRFHITDGIRELNDRVLKSSFLEDSHNSVAS------- 1004 Query: 1073 QAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLF 1117 D ++ + T +A +++ + PL Sbjct: 1005 --------------DYAFRICFGADTTLDRDA----AEKIINPLL 1031 >UniRef50_B5JRL4 Exodeoxyribonuclease V, gamma subunit n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JRL4_9GAMM Length = 1150 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 379/1187 (31%), Positives = 565/1187 (47%), Gaps = 135/1187 (11%) Query: 13 LEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-----FGIAANIDFPLPAS 67 + L L P E+ LVQS GMAQWL++ ++ GI A F +P+ Sbjct: 1 MLKLAINWQAEHPLP-PLAEEVFLVQSNGMAQWLKLNIAADREDGGLGIQAGQRFEMPSR 59 Query: 68 FIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK---R 122 F+W + VL +P S ++K ++ W+LM LLP+L+E + F +LRHYLT D + R Sbjct: 60 FLWSAYRAVLGNDKVPTASPYDKATLQWRLMRLLPELVEDDAFRVLRHYLTSDDETVATR 119 Query: 123 KLFQLSSKAADLFDQYLVYRPDWLAQWET---------GHLVEGLGEAQAWQAPLWKALV 173 K +QLS + AD FDQY VYR DWL W G L WQA LW+ L+ Sbjct: 120 KRYQLSQQLADTFDQYQVYRADWLEDWAQQRDRLSRFGGQQARALPAEDHWQAQLWRRLI 179 Query: 174 EYTHQLGQP---RWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL 230 + P R +++RFI+ L S LP R+ + G+S+LP L+AL A+ Sbjct: 180 DDIETDSTPSHSVLSRGQIHRRFIDALHSGRDYSAYLPPRITVFGLSSLPYQTLEALAAM 239 Query: 231 GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 G H ++ L+ NPC++YWGDI+ + A + + Sbjct: 240 GLHTQVMLMVHNPCQHYWGDIR-----------------------QHAPTRQAVKDAVAA 276 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQE-------LDAF---VDVTPDNLLHNIQS 340 + PLLA+WG+ GRDY+ LL++ + ++ +D F D LL Q Sbjct: 277 EHSESEQPLLATWGQQGRDYLQLLAEFDQPEDYQQHFEKIDVFNSPADNASPTLLQQWQH 336 Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 I +L++ + + S D S+ FH CHS QREVEVLHD+LL E + Sbjct: 337 SIYDLQSLPEEKNILSKDSL--------EGDRSLRFHSCHSAQREVEVLHDQLLDAFERN 388 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVF-------GSAPADRYLPYAISDRRARQSHPVLEA 453 P L P+D+IVMV DI Y+P I+AVF G RYLPY ISD + ++P + A Sbjct: 389 PALRPQDVIVMVPDIQRYAPHIEAVFGLYKPRTGQERDPRYLPYTISDSSLKSANPTVNA 448 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 LL RF D+L LL+ P L RF + L+QW+ ++G+RWG++ + + Sbjct: 449 IEQLLHSDQLRFSLSDILGLLESPALQRRFGLENSDPSLLKQWLEQAGVRWGLNREQRAQ 508 Query: 514 LELP--------ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 +LP A +TW FGL R+LLGY+ E+ W + P S AE +G L Sbjct: 509 HDLPSESSEPSEALSANTWAFGLNRLLLGYSSEAR---WNGIEPSAPFSNSDAEAIGALW 565 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVC-RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 L+ L+ + + L + +W + +L F D + + + Sbjct: 566 RLINTLDGFSQSLQHAKTPSQWSQFIGQTLLEFFDSDDDSDAPLFDALNHALEQWLDACQ 625 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 A + DA+PLS++R+EL LD ++QRFLAG +N +LMPMR++PFK+VCLLG+NDG Sbjct: 626 RADFNDAIPLSMVREELLPALDDSGLNQRFLAGCINFASLMPMRAVPFKMVCLLGLNDGD 685 Query: 685 YPRQLAPLGFDLMSQKP--KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 YPRQ FDLM ++ + GDRSRRDDDRYLFLEA +SA++ LY+S++GRSI+DNS R Sbjct: 686 YPRQQPRQDFDLMRRREHYRPGDRSRRDDDRYLFLEAALSAREALYLSWVGRSIRDNSVR 745 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN---YQPGER 799 S+L+ +L D I L +++ + +LT H P+ Q + Sbjct: 746 AQSILLAQLRDDIAARFQLD-------NDAHPTLLEYLTLEHPLQANSPRYLDTLQSAQY 798 Query: 800 QSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRT 859 +YAREW + + + ++ + +T+ L L+ P F + RL++ F Sbjct: 799 FTYAREWFDEPRSSDRNTT--LKAIDSNEAQTLSLSDLRLLLRQPCDVFLRQRLKIAFDD 856 Query: 860 EDSEIPDTEPFILEGLSRYQINQQLLNALVEQ-------DDAERLFRRFRAAGDLPYGAF 912 D + D EPF L+GL RYQ+ Q LL + +R R+ ++G LP G F Sbjct: 857 GDDSVLDHEPFSLDGLDRYQLGQSLLEDGAQDLSPSGLNAALDRAKARWLSSGQLPPGEF 916 Query: 913 G----EIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN-GVQITGWLPQVQPDGLLRW 967 G E + + + ++ A QP I LA G + W ++ Sbjct: 917 GLTLIEQRLDDVADTLSRYREQSQALIQPLPPQAIVLADELGWTLEDWTRELASTASGTP 976 Query: 968 RP-------------SLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAE 1014 L + + WL HL + G L L ++G R P+ AE Sbjct: 977 HYYQINLTPGTLRSGRQLKYHRLLNDWLNHLAASSLG-YSLHTLILCEEGGVRISPMPAE 1035 Query: 1015 QALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQA 1074 QA HYL QLI YR ++ PL + E+G A+ T A+ + ++AR++ A Sbjct: 1036 QAAHYLKQLISAYRNALAQPLPIQLEAGCAYAHTLATAKANHE-------EQARSEAQNA 1088 Query: 1075 YEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 YE + + ++ LW E + + PL Q Sbjct: 1089 YESRLSASQQRCYASFEVLW-----EHSGEFLRWMETLYQPLVEHTQ 1130 >UniRef50_Q60AZ6 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Methylococcus capsulatus RepID=Q60AZ6_METCA Length = 1138 Score = 654 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 318/1191 (26%), Positives = 511/1191 (42%), Gaps = 133/1191 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L ++ SNR ++L + + + DPF E ++V S + + L++ + +FG+ AN++ Sbjct: 5 LNIFFSNRFEILTQRLFDDLAQGP-ADPFVAEQVIVPSLAVRRRLELDHADRFGVCANVE 63 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 F A ++W +V+ E+ S F +++W++ +L + L+ YL +D Sbjct: 64 FSYLAHWLWVQIGQVI-EVGASSPFAPATLTWRVFRMLGEEALVSAHPRLKSYLA-RADG 121 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGE----AQAWQAPLWKALVEYTH 177 F L+ + A L +QYL YRPDWLA W G GL E +AWQA W+ LV+ Sbjct: 122 AMRFDLAQRVAHLLEQYLTYRPDWLAAWLEGRPASGLPEASREDEAWQAAFWRTLVDELE 181 Query: 178 QLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIH 237 R H + + R +E + T GLP+R + + +PP+YL L L + E+H Sbjct: 182 V---RREHPSAAFFRAVEAMGPEATRRAGLPARAHLFCLPTIPPLYLDILGKLARWTELH 238 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 L NPCR YW DI DP L L R ++ GN Sbjct: 239 LYVLNPCREYWFDIVDPRRLNYLEVR------------------------GDALYRETGN 274 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDA--FVDVTPDNLLHNIQSDILELENRAVAGVNI 355 LLA+WG+ + +I LL D +D F +LL +Q IL+L + Sbjct: 275 RLLANWGQQTQAHIDLLFDKAEGAVIDDAQFEPPARISLLAAVQEAILDLRDPEPGCCAS 334 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 D SI HVCHS RE+EVLHD+LLA+L DI+V++ + Sbjct: 335 V------------AGDRSIEVHVCHSLVRELEVLHDQLLALLARPDAPKVSDILVVMPRL 382 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 + +P I AVFG+APA R +PYAI+ R ++P A ++LL L SR + V L Sbjct: 383 EEAAPLIDAVFGTAPAARRIPYAITGLRRTVANPAAAALLTLLGLFASRCKASAVYEFLQ 442 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 P++ ARF + + L + W +GIRWG++ + + + LP +H++ GL R+ LGY Sbjct: 443 RPLVHARFGLGLDDLECIHDWFQAAGIRWGLNGAHRKAVGLPEVERHSFCDGLDRLFLGY 502 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 A+ ++ LP G A +G A + L W R + + W ++ Sbjct: 503 ALGDVPVQFDGRLPAGSPEGSEALALGGFAHFVDLLTHWHRVWSTPATAQTWGERLNAVV 562 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 AF + ET + + + A+ A + ++R L LD Sbjct: 563 GAFLMETPETVPDLQEVREAIAALSRHWGEAAVTGTIEPEVVRVALESLLDD-PARGGTP 621 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 +G + + +RS+P++VVC++G+NDG +P P FDL++Q P+RGDR RR D+R L Sbjct: 622 SGRLTFTAMASLRSLPYRVVCVIGLNDGEFPHPDRPAEFDLIAQAPRRGDRQRRYDERNL 681 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 FL+ L++A+++LY+SY GRS++DN+ PS + + ES Sbjct: 682 FLDLLLAARERLYLSYTGRSVRDNAPLPPS-------TLLSELLDYLLPLVAAAGESPEE 734 Query: 776 VKAHLTCLHTRMPFDPQNYQPG-----ERQSYAREWLPAASQAGKAHS------------ 818 + L H F P + S+ E+ A A Sbjct: 735 ARRRLVVEHPLQAFSPVYFDAAVAKDPRLVSFNSEYCEALRAARSPRPSGEGVRACESHS 794 Query: 819 ----------------------------------------EFVQPLPFTLPETVPLETLQ 838 P L+ L+ Sbjct: 795 QEPEECSAILAERERADHGPAGPIAGEEQNDPDFEHAPFFPAPMAAPEPEWREPNLDVLK 854 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF 898 RF+ +P R + RL + ++E+ D EPF+ +R ++ ++LL ++ E + Sbjct: 855 RFFRNPCRYLLEQRLGLTLAEGEAELADDEPFLPAYFARGEVAERLLPLMLSAATEEAVE 914 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ------SMEIDLACNGVQI 952 RA + P G GE+ + + +++ A+R+ Q + + + Sbjct: 915 VVARAGIEFPQGQLGELLLKGELTRIREYAERIAGQTQEEPLQPLPGRLAFQIEGETWTL 974 Query: 953 TGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCAS--GGNGESRLFLRKDGEWRFPP 1010 +G L QV GL+RWR + WL+HL A G + ++ +DGE+R P Sbjct: 975 SGALGQVWRRGLVRWRYDDTRPVDYLSGWLDHLFLNALAVRGVEPTTTWISRDGEYRLRP 1034 Query: 1011 LAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTK 1070 +AA A L +L+ YREG+ PL P S A Q A + Sbjct: 1035 VAA--AQERLRELVALYREGLRLPLHFFPRSAWACALGLKQG----------GSQAAERQ 1082 Query: 1071 FLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 + +EG+ RGE +D+ Y++ R A + PL + Sbjct: 1083 ARKRWEGSGDRRGESEDLAYRQALRGQADPLDGAFFRTVRTVFGPLLDHLE 1133 >UniRef50_C4ZM87 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Thauera sp. MZ1T RepID=C4ZM87_THASP Length = 1218 Score = 653 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 366/1243 (29%), Positives = 541/1243 (43%), Gaps = 181/1243 (14%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 H NR++ L + + + L P E E+ILVQS GMA+W++M ++++ G+ A Sbjct: 18 FIALHGNRIETLLDTVAGWLAQHPLA-PLESEVILVQSNGMAEWVKMAIARRAGVCAAAA 76 Query: 62 FPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 LPA F W + +VL +P S +K +++W+LM LLP++L F + YL D+ Sbjct: 77 VQLPARFQWQTYRQVLGRAQVPARSPLDKTALAWRLMRLLPEVLAEPGFAPVAGYLADN- 135 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL------------------------V 155 D + FQL+ + ADL+DQY V+RPDWL W G Sbjct: 136 DPGRRFQLALRIADLYDQYQVHRPDWLDAWGEGREALPDAGRGETPLTGRGETPLAGRGE 195 Query: 156 EGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLP-----SR 210 L E Q WQA LW+ +V+ Q R L+ R + L++ P R Sbjct: 196 TPLPEDQRWQARLWQRVVDEL-DPQQRALTRPQLHDRVLAALDAIAEDAALHPAAALPRR 254 Query: 211 VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFE 270 V + G++ +P LQ L AL +H ++ L NPCR++W DI D ++ R++ Sbjct: 255 VVLFGMTHVPLPTLQLLAALSRHAQVLLAIPNPCRFHWADILDGREWLRIARRRQPLRDG 314 Query: 271 DRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ--------- 321 Q D +PLLA+WG+ RD++ L + ++ Sbjct: 315 R-----------ELQDVGLDAMHLHAHPLLAAWGRQARDFVRQLDAFDDAEQTRARFPLA 363 Query: 322 ELDAFVDV------TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSIT 375 +D F D LL +Q I +L A P+ D SI Sbjct: 364 RIDLFDDDQDTHDVAQPTLLVQVQRHIRDLTPLAEH-----------PHPPVPAEDRSIV 412 Query: 376 FHVCHSPQREVEVLHDRLLAMLEE---DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA- 431 FH+ HSP RE+E+LHD+LLA+L D L PRDI+VMV ID ++P I+AVFG Sbjct: 413 FHLAHSPVRELEILHDQLLALLARPPGDKPLRPRDIVVMVPSIDDFAPAIRAVFGQYGRH 472 Query: 432 -DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 R++P+ I+D AR S P++ A LL + R D+ ALLDVP +AARF + EEGL Sbjct: 473 DPRHIPFDIADLSARASSPLMGAVEWLLRIRHDRCRLSDLGALLDVPAIAARFGLAEEGL 532 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPAT-GQHTWRFGLTRMLLGYAMESA----QGEWQ 545 L W+ +GIRWG+D + L L A Q++ FGL RML+GYA + + Sbjct: 533 PRLTGWMRGAGIRWGLDARHRAGLGLQACGEQNSALFGLRRMLMGYAAGRSEVTTDAPFA 592 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP-DAE 604 + PYDE GL AEL G LA L+ +L W+ + W R +L D Sbjct: 593 GIEPYDEVGGLDAELAGALAHLVERLIRWQADSRRPATPAAWTQRLRALLADLVRAVDDT 652 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 + ++ + + A + +PL++ + L+ + +RF AG V CTL Sbjct: 653 DRQTLAALDDALERWLEACDEAAFEAELPLAVAAEAWLAALESPALDKRFRAGGVTFCTL 712 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ--KPKRGDRSRRDDDRYLFLEALIS 722 MPMR+IPF+VVCLLGMNDG YPR+ FDLM+ + + GDR+RRDDDR L LEAL+S Sbjct: 713 MPMRAIPFEVVCLLGMNDGDYPRRSPRSDFDLMALPGQQRPGDRARRDDDRQLMLEALLS 772 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 A++ LY+S+ GR+++DNS + PSVLV +L DY+ V A T Sbjct: 773 ARRVLYLSWCGRNVRDNSVQPPSVLVAQLRDYLAAGW-------------SPAVVAERTV 819 Query: 783 LHTRMPFDPQNYQPGE-RQSYAREWLPAA---------------------------SQAG 814 H PF + ++PG +YAREW A G Sbjct: 820 EHPLQPFSRRYFEPGTPLLTYAREWRAAHVEAAAQDDAVPSHDGQANREATGRATRPTRG 879 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 +A S + P + + L F +PV+ FF+ RL V + D +PD E F +G Sbjct: 880 EAASPPLPPFVPDPAVPLTIAALAAFLRNPVKVFFRERLGVVYEDVDEALPDDEAFGFDG 939 Query: 875 LSRYQINQQ---------------LLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET 919 L + + ++ L+A + E R AG LP G G Sbjct: 940 LEEHGLVEELAAAVLADLALLPPPELHAFALEAAVEAQLGRIERAGRLPIGGLGLRARAA 999 Query: 920 QCQEMQQLADRVIACRQPGQ----SMEIDLACNGVQITGWLPQ-VQPDGLL--------- 965 + + L R + A G + WL V+ D Sbjct: 1000 LGEAVLPLLRAWRLVRASHPLDAERGNLRFAHAGALMEDWLDHRVRADEHALPSWLAHDP 1059 Query: 966 -----RWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL 1020 L + + W+ L+ A+ L + +D P A L Sbjct: 1060 GRLLEDADKGTLRPWRLLLPWVRSLLAAAADS-PSGGLLVGRDATVHIVPTDPAVARALL 1118 Query: 1021 SQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMM 1080 ++LIE + G+ PL V + A + A +AYEG+ Sbjct: 1119 ARLIEAWIAGLGEPLPVAARTALALVGEGKPA--------------------EAYEGSEH 1158 Query: 1081 VRGEGDDIWYQRLWRQLTPETME-AIVEQSQRFLLPLFRFNQS 1122 RGE ++ R + + ++ PL + S Sbjct: 1159 RRGEVEEASLARCYPDYAALIEDGRFEHLARALYGPLLEWMDS 1201 >UniRef50_C3X2X1 Exodeoxyribonuclease V n=2 Tax=Oxalobacter formigenes RepID=C3X2X1_OXAFO Length = 1129 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 309/1179 (26%), Positives = 510/1179 (43%), Gaps = 127/1179 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML + SNR DVL + + F E ++V S + + L + ++ G+ A + Sbjct: 12 MLNLNLSNRFDVLLQTFCENLAKRP-ATVFTAEQVIVPSAAIKRKLMLAIADTAGVCAGV 70 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +F A ++W + + E+P+ S F+ +SW+++ LL + + + YL+ D Sbjct: 71 EFSFLAQWLWRQIGKFV-EVPETSPFSSSVLSWRILRLLEEPGFAAPYPRIAGYLS-RCD 128 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGL----------GEAQAWQAPLWK 170 + F L+ + A LF+QY++ RP+WLA W G VE + GE QAWQA LW+ Sbjct: 129 EIMRFDLACRIASLFEQYVLSRPEWLAAWSKGETVEIVRKGHPKQAVAGEDQAWQAALWR 188 Query: 171 ALVEYTHQLGQPRWHRANLYQRFIETLESATTC-PPGLPSRVFICGISALPPVYLQALQA 229 + E T L + +RF++ LE+ LP RV + ++ P ++ L Sbjct: 189 KIAEETGTLEEEPA------ERFLKMLETGGEEMAARLPERVHLFLEPSVAPYHVGILNR 242 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 LG+ ++I L NPCR YW +I D LA L RQ+ Sbjct: 243 LGRWMDIELYVVNPCREYWFEIVDSRRLAWLSKRQK------------------------ 278 Query: 290 DGEQDVGNPLLASWGKLGR-DYIYLLSDLESS-QELDAF----VDVTPDNLLHNIQSDIL 343 D + GN LLASWGK R LL+ LE +E D F P+ LL +Q IL Sbjct: 279 DLYHETGNRLLASWGKESRASLESLLARLEPVGRENDGFISCAERARPETLLSRLQDAIL 338 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 +L ++ D S+ H+ HS RE+E+LHD+LL Sbjct: 339 DLTELEAGSLSHL------------GRDGSLEIHLAHSRTREIEILHDQLLRRFASGDPP 386 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 P DI+V+ D+D +P I+AVF + +PY I+ R+ + +PV A + LL+L S Sbjct: 387 GPGDILVVSPDLDEIAPMIEAVFSHNRSAPQIPYVITGRKDSRINPVSRALLDLLALASS 446 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 RF + V+ +L +P + A F L +R W+ ++GI W ID + RE LP H+ Sbjct: 447 RFTAAGVIDVLMLPEIGATFGFGG-DLDKIRGWLGDAGICWAIDGAHKREFGLPEEDGHS 505 Query: 524 WRFGLTRMLLGYAMESAQGE-WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 + GL R+ L YA+ + + LP ++G A +G L + + +R L+ + Sbjct: 506 FHDGLHRLFLAYALPDGRRVPFADRLPAGHAAGTQAAGLGQLWRFVEAVRQLKRDLSHPK 565 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 W +L+AF ET A + + + A + R L Sbjct: 566 TAAGWWQTWHGILDAFVTVTPETLEADREVRMRIAGLRDAMTQAGEAFETGFIIARHALE 625 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 + L+ AG V + +R++PF V ++G++DGVYP ++ FDL+ P+ Sbjct: 626 RALEGAGQGSVP-AGVVTFAPMDSLRNLPFGHVYVIGLDDGVYPAEVRQQEFDLIRLAPR 684 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 +GD + D+ +FL+ ++SA + LY+S GR+I+DNS + PS+L+ EL++ + + Sbjct: 685 KGDCLPHETDKNVFLDLVLSAGKSLYLSCTGRNIRDNSPKPPSILIAELLEVLEPALAEK 744 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNY---QPGERQSYAREWLPAAS-------- 811 D E+ + L H PF P + S+ + A + Sbjct: 745 TD-----GEARLAAREKLLVEHPLQPFSPDYFNGRADERMVSFRSDLCDALNLKKEKINI 799 Query: 812 ---------------------QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQ 850 AG P V L+ L RF+ HP R + Sbjct: 800 KEELEYDTSEDGLDNDIGDELAAGTPFFRAPLAFPDASWRDVLLDDLIRFFCHPNRYLMR 859 Query: 851 MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYG 910 RL ++F ++ E+ EPF ++ +R ++ +LL ++ E + R A + P G Sbjct: 860 SRLGLDFPRKEKELASDEPFTVDRTARRRLADRLLPLYLDGMAPEDIARSAAAGNEFPAG 919 Query: 911 AFGEIFWETQCQEMQQLADRVIACR------QPGQSMEIDLACNGVQITGWLPQVQPDGL 964 A G +++ E+ A + A +++E DL +++G L V+ GL Sbjct: 920 AMGAQQRQSELMELSAFAQALSADLKTGFVAPVSRTLEFDLGGEIWRLSGSLSDVRKTGL 979 Query: 965 LRWRPSLLSVAQGMQLWLEHLVY--CASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQ 1022 +R+R + + W+EHL CA G S ++ +DG+ P +A L Sbjct: 980 IRYRYDEGAPRDYLAAWIEHLFLNACAPEGVALSSVWHFRDGKTVLEP--YGRARAVLRD 1037 Query: 1023 LIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVR 1082 L++ YR G++ PL P S ++++ KA + A + R Sbjct: 1038 LMDIYRTGLNRPLHFFPRSAWEFVQSG------------GHAGKANGIWRPA---DGSRR 1082 Query: 1083 GEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 GE D + R + + R PL + Sbjct: 1083 GESADAFNWLAMRGVREPLDADFAALANRVFGPLLAHMK 1121 >UniRef50_P57528 Exodeoxyribonuclease V gamma chain n=4 Tax=Buchnera aphidicola RepID=EX5C_BUCAI Length = 1070 Score = 634 bits (1635), Expect = e-180, Method: Composition-based stats. Identities = 308/1118 (27%), Positives = 572/1118 (51%), Gaps = 51/1118 (4%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +Y SN L+ L I+E + + FE E+ + + + Q+L + +++K GI+AN Sbjct: 1 MFTIYKSNSLNTLLLKAYHIIEEKPFSNIFEKEIFIYDNKVLFQYLNIFIAEKKGISANF 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 F P FIW +F +L + ++ F + W+++ +L E+ + D Sbjct: 61 KFYHPNDFIWKLFKIILSKKELKNIFTHSMIIWEIIKILDNKKFFENCS-------KKKD 113 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 K F+ S A +F +Y++YRP+W+ QWE + + + WQ LW ++ T ++ Sbjct: 114 MIKKFKFSFLMASIFKKYILYRPEWINQWEIEKNISIFDKNEQWQIKLWMEIIHNTKKIN 173 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 Q H ANL+ + ++ LP R FI ++ P Y++ Q + + +I+ L+ Sbjct: 174 QSSDHFANLFYNIQKIIKEKKIKKKYLPKRFFIISSFSMNPSYIKIFQNISIYTDIYFLY 233 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 P + + +D ++ E L +S L+ Sbjct: 234 ITP-----------------FKKNIFNFIQDNKIFTDIKIEKKNILNDS---------LI 267 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 WG+ Y + + + ++ ++ F +LL I+++ + Sbjct: 268 TLWGQYEEIYYFYILKSKKNKVINCFKKNKNKSLLSQIKNNFFN------------DSEF 315 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + KR L+ D SI+ ++C + + E+EVL+++LL L E+ ++ P DI+V +D+Y Sbjct: 316 TRKKRFLEISDHSISINICFNKKNEIEVLYEKLLIFLNENSSIKPGDIVVTSFSLDTYIS 375 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 I +F S + +P+ I+ + ++ + +L +F +L+L +SRF +E++L LLDVP +A Sbjct: 376 SINLIFQSIDNKKTIPFFIAKKSSKTTEIMLWSFKKILNLSNSRFENEEILELLDVPEIA 435 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 +F+ +EE ++ L W+ E+ IRWGI++ + L P Q+TW +G+ ++LL YAM Sbjct: 436 EKFNFSEEEIKILYHWIEETNIRWGINEKHKNYLLFPKNKQNTWFYGIEKLLLSYAMNDT 495 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + W VL +G +EL+G L S + L W++ L++ + L W + D+++ FF Sbjct: 496 EKIWNGVLSCSFINGSRSELIGKLISFIKILEKWQKKLSKLQYLTYWRSLYSDLVSDFFQ 555 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 + + E ++ +I+++W II + L + Y + +++L+ + + FL G VN Sbjct: 556 NNTKIEKSIQIIQKKWIEIIDDSLSSNYLKKISINILKKIFFYKYYD-NNHEIFLPGVVN 614 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 C + IPFKV+C++G + P+ F+L+ + P GD + YLF+++L Sbjct: 615 FCYPDSVCYIPFKVICMIGTDHTSIPKTNYLDNFNLLKKYPLIGDINLYQKYSYLFVQSL 674 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 A++ YISYIG S++D S+ PS+LV +L++YI + GD+ L+ E+ ++ +L Sbjct: 675 SCAEKYFYISYIGYSVKDESKVHPSILVDQLLNYITLNFCFIGDQNLSYKENSKKITKYL 734 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 H + F Y+ +S+ ++ + + + + L + L+ L F Sbjct: 735 CKKHKKQFF----YETKNIESFIQDDIKNDFKHTEKNISHKNLLKKNTDNEINLKDLINF 790 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR 900 W HP+R F+ L++ R + +I TE F++ L+ ++I +LL+ ++ + +L++ Sbjct: 791 WKHPIRYFYNSHLKIKIRQKKQKINTTETFLVNPLNSFKIKNKLLDYIIHNKNITKLYQH 850 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ 960 + +G LPY FGEIFW +EM+ +A++V+ R + +I+L QI G L ++Q Sbjct: 851 YLLSGKLPYHFFGEIFWIKNIKEMKLIANKVMQYRIEKEEKKINLNIEKYQIYGVLSEIQ 910 Query: 961 PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL 1020 GLLRW+ S + + + LWLEHL+Y GG G+S++ K W F L + +A YL Sbjct: 911 STGLLRWKTSSIRYSDRIALWLEHLIYSILGGCGKSKIIGYKSQIWSFSSLNSHRAHSYL 970 Query: 1021 SQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMM 1080 + I+GY +GM PL L +SG +WL YD +N+ + +D T KA K L ++G+ Sbjct: 971 LEYIKGYIKGMKEPL-FLTKSGASWLDQVYDERNNCIKNDYYTKIKAYKKLLYTWKGDNY 1029 Query: 1081 VRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 GE +D + ++ + ++ I E ++++L+P+ + Sbjct: 1030 TEGEQEDYYLKKTITISNKKNIKKICESAEKWLIPILK 1067 >UniRef50_Q1NSB7 Exodeoxyribonuclease V, RecC subunit n=3 Tax=Proteobacteria RepID=Q1NSB7_9DELT Length = 1155 Score = 631 bits (1628), Expect = e-179, Method: Composition-based stats. Identities = 341/1186 (28%), Positives = 532/1186 (44%), Gaps = 104/1186 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVE-----------RERLDDPFEPEMILVQSTGMAQWLQMTL 50 L +Y SNR++ L A +E + P E I+VQS GMA WL+ L Sbjct: 6 LLLYRSNRIEELLACLEAELAVASSAGSSAGSSAGSSAPLTAECIVVQSQGMAVWLEQRL 65 Query: 51 SQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTL 110 +++FGI AN DFP P F + VL +++S + L+ LLP+L +R +F Sbjct: 66 AERFGIWANPDFPHPRRFHQRLLQAVLGRQAVADFSHRESFTLALLALLPKLPQRPEFAP 125 Query: 111 LRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLG----EAQAWQA 166 L YL D +D K QL+ K A LFDQY VYRP+ + WE G G WQ Sbjct: 126 LARYL-DGADDWKCLQLAEKIAYLFDQYAVYRPEMVLAWERGEEQAGTAGAELADNRWQP 184 Query: 167 PLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQA 226 LW+ L P L + F + P LP R F+ I+ LPP+YL Sbjct: 185 LLWRRLSRQLGSPVAP------LTEAFASLRQGRLAAPELLPPRAFLFAITTLPPLYLNL 238 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 L + I IHLL +P R YW DI PA L ++ R + + + Sbjct: 239 LDQAARIIPIHLLLFSPAREYWADIFTPAALREMELRHSDAALLE-------------EG 285 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ---ELDAFVDVTPD-NLLHNIQSDI 342 + G+PLLAS G + R++ +L + Q + + F + + LL +Q DI Sbjct: 286 EPAALHLSGGHPLLASLGTVAREFQDILEEQSDYQPATDGERFPENQENPGLLARLQQDI 345 Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 +L+ A + D S+ H+CHSP REVE + L L + Sbjct: 346 AQLKEPAAGEGEESQ---------PPTADDSLAIHICHSPLREVE-VLQDQLLQLLDGEE 395 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSA-PADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 +P DI+VMV DI++Y+P I+AVF R +PY I+DRR + +L+ + + Sbjct: 396 FSPHDIVVMVPDIETYAPLIEAVFNRPPGDRRRIPYRIADRRLSREGELLDTLLRFFEVA 455 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 R VL LL + + L+ + QW+ +S + WG+D+++ + PA Sbjct: 456 RGRLEVSAVLDLLAAEPVRRGLGLDGGQLQRIEQWLRQSRVCWGMDEEHRQHHGQPAQRL 515 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 +TWRFGL R+LLGYAM +A + +LP+ + G + G L +L + + Sbjct: 516 NTWRFGLDRLLLGYAMPAASDVFADILPHADIEGQESVTAGILLRFCEELFALVKLVQTP 575 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + + +W + + +L + DA ++ + +++E A + L L Sbjct: 576 QTIADWATISQRVLISLGGDDAASDWQELCLRDTLAQLLSEADQAALTRPLELPAFLRLL 635 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 RLD ++ FL G + C ++P+R+IPF VVCLLG+N+ +PRQ FDL++ P Sbjct: 636 RGRLDGAGGTRGFLDGGLTFCNMLPLRTIPFPVVCLLGLNNDDFPRQEPAADFDLLAAAP 695 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 + GDR RR DDR++FLE+L++A+++LYISY+GRS++DN PSVLV EL+ + Sbjct: 696 RPGDRCRRRDDRFMFLESLLAARRRLYISYVGRSLRDNRSLPPSVLVDELLTCLAAMS-- 753 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ--PGERQSYAREWLPAASQAGKAHSE 819 P N + RV A T H PF P+ +Q G SYARE+LP + A + Sbjct: 754 PKAAGANDEAHRQRVAARFTVEHPLQPFSPRYFQNTAGPLFSYAREYLPPPASPDAAPAT 813 Query: 820 FVQPLPFTLPE-----------------TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 P + L L F+ HP + + RL + + Sbjct: 814 VSGPRAQLPAAADHDSVPPAAWMSTTSTAISLADLHDFFRHPAGWYGRRRLGLLPPQQQP 873 Query: 863 EIPDTEPFILEGLSRYQINQQ--------LLNALVEQDDAERLFRRFRAAGDLPYGAFGE 914 D +P L+ L RY+I + L + + + L+++ RA G+LP G + Sbjct: 874 AGVDRQPLELDNLDRYRIGSRLLQQPALLLPDGAAGEPPWQALYQQLRAGGELPPGRAAQ 933 Query: 915 IFWETQCQEMQQLADRVI--ACRQPGQSMEIDLAC-NGVQITGWLPQVQPDGLLRWRPSL 971 ++Q LA + + + +DLA + ++++G L Q LLRW PS Sbjct: 934 PALRELVADLQPLATFLAGNPGGKTLPPLVLDLALADNLRLSGELSQRATAALLRWSPSR 993 Query: 972 LSVAQGMQLWLEHLVYCASGG--NGESRLFLRKDGE-----WRFPPLAAEQALHYLSQLI 1024 S + WL+HL CA + + +D + F PL++E A L++L+ Sbjct: 994 ASAKLWLAGWLDHLALCAQAPEDQDWQTIMVGRDQQNGADIRIFRPLSSELARELLTKLL 1053 Query: 1025 EGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRG- 1083 + G PL P S ++ AQ ++ K QA+ G+ RG Sbjct: 1054 ALFVAGQQGPLPFFPRSAYEFVAKTMTAQEESQEA------KGWQAARQAFYGDGYQRGA 1107 Query: 1084 --EGDDIWYQRLW------RQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 E D + + L+ E ++ PL + + Sbjct: 1108 PPESADFYVETLFFGPSGRSPAATELPPGFAATARLVYEPLLQNLE 1153 >UniRef50_A4B914 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Reinekea blandensis MED297 RepID=A4B914_9GAMM Length = 1080 Score = 629 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 325/1124 (28%), Positives = 521/1124 (46%), Gaps = 97/1124 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK--FGIAA 58 ML Y SNRL+ L ++ + +P + +LVQ GM WL M L+++ + Sbjct: 1 MLYTYPSNRLENLVLVL-DTLMNNIGSEPLTADAVLVQHPGMQHWLSMELAKQSSNQLCM 59 Query: 59 NIDFPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQ--LLEREDFTLLRHY 114 NI +PLP + WD+ +L +P+ S + ++ ++W+L LL Q + Y Sbjct: 60 NITYPLPVRYFWDLIRLILGPDRVPERSVYTREILAWRLYHLLQQDAITANPLMLEPNRY 119 Query: 115 LTDDS---DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKA 171 + + FQL+ + ADL++QYL+YRPDW+ W+ A+ WQA LWKA Sbjct: 120 WQEQPAYLQDSRRFQLAEQLADLYEQYLMYRPDWIEHWQE-------SPAEHWQALLWKA 172 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 LV+ H L + L LPS F+ GI++L P++L L L Sbjct: 173 LVDE------DPQHPLALMREASRRLSHPAQP---LPSHFFVFGINSLAPIWLDFLSHLA 223 Query: 232 KHIE--IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 + + IH+L+ NP +W D + K + R + + ++A + Sbjct: 224 RSTDTDIHILYLNPSAEHW----DQLHTEKQALKTRLRQQQSAQQRASWIDDDALFTDEA 279 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA 349 D NPLL S G+ G+ ++ LSD + AF + L +Q D+L L + Sbjct: 280 D------NPLLTSLGQQGQVFVRQLSDKAD-YDAQAFSAPEAETQLQTLQRDLLTLHDAR 332 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 ++ D ++ HS REV+ LHD LL DPTLTP+D++ Sbjct: 333 SQPHTLDH-------------DGTLMISSAHSAFREVQGLHDWLLHRFNADPTLTPKDVL 379 Query: 410 VMVADIDSYSPFIQAVFGSAPADRY-----LPYAISDRRARQSHPVLEAFISLLSLPDSR 464 VM +++ Y+PF+QAVF + A+ LP +I+DR + + P + AF+ LLSLPD+R Sbjct: 380 VMCPNVEDYAPFVQAVFSRSFAELSEAVPPLPCSIADRNLKDADPTVAAFLELLSLPDTR 439 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL-ELPATGQHT 523 F +++ L +P +A +F+++ + L+ + +W+ + I WG+D + + T T Sbjct: 440 FEVSRLISWLRIPAIADKFNLSADDLQRITRWLERANIHWGLDGQHKAQWTGQECTDHFT 499 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 W+ GL R+LLG+A L + G A ++G L S++ QL R L + R Sbjct: 500 WKQGLDRLLLGFAYGDHDAFVHDELLLHDVEGADALILGRLTSIIEQLQNIRSDLTRART 559 Query: 584 LEEWLPVCRDMLN-AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA-VPLSLLRDEL 641 W D L A + E + I + A +PLS++R L Sbjct: 560 PSAWQSYLIDQLQIAMLSTQSAYERSNQSILKAINDFTEFANKANLEQTDLPLSVVRYVL 619 Query: 642 AQRLDQ-ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 E+ +F+ G + +C+++PMRSIPF+VV +LG+NDG +PR PLGFDLM+Q+ Sbjct: 620 ENAFASPEQTGSQFMTGQITVCSMVPMRSIPFRVVAILGLNDGDFPRNRPPLGFDLMAQQ 679 Query: 701 P-KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 P + GDRSRR DDRYLFLEAL+SA+ LY+SY G I+ N R PS++++EL Y+ + + Sbjct: 680 PPRLGDRSRRGDDRYLFLEALLSARDHLYLSYQGFDIRKNEARPPSLVLEELFSYLERGY 739 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 +A PF P+NYQ GE S+ +W+ + Sbjct: 740 GFE--------------RARHIRQLPLQPFSPKNYQ-GEYPSFNDQWIHLQRPEPEQELL 784 Query: 820 FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE-IPDTEPFILEGLSRY 878 + P P + +F++HP RAF + RL + +E + D+EPF L L RY Sbjct: 785 NLLPATDLSPSE-SIHDWVKFFSHPARAFCEQRLGLYLNNTTTENLEDSEPFTLNHLDRY 843 Query: 879 QINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG 938 Q+ + ++AL+ Q+ + L ++ +AA P ET Q+ D V A Sbjct: 844 QLQTETVSALLNQESPDVLIQQAKAASAFPLSDLALTTAETWQQQAASFTDLVRAEGADR 903 Query: 939 QS-MEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESR 997 + L ++G LP + LL WR + +QLWL HL+ + Sbjct: 904 IEYRPVTLQTADWSLSGVLPIIDNQQLLSWRLANAKGRDILQLWLMHLLANSQKPTHSRG 963 Query: 998 LFLRKDGEWR-FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDA 1056 L+ +D + F E A L+ L +++G+ P ++ + WL + Sbjct: 964 LYRGRDEKVEQFDLAPIEDATSLLNDLYRQWQQGLQEPSVLHSD----WLPLYLSDPTN- 1018 Query: 1057 MLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPE 1100 KF Q ++ N RG D + ++Q+ Sbjct: 1019 -----------EKKFWQIWDDNFNHRGLRYDPYIDFCFQQMPDP 1051 >UniRef50_B4RTM0 Exodeoxyribonuclease V, gamma subunit n=3 Tax=Alteromonas macleodii RepID=B4RTM0_ALTMD Length = 1206 Score = 627 bits (1616), Expect = e-178, Method: Composition-based stats. Identities = 296/1119 (26%), Positives = 495/1119 (44%), Gaps = 141/1119 (12%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +Y SN+L+ L L+ ++ ++ L D F PE ILV+S GM W+ M ++ K G+A NI Sbjct: 1 MLALYPSNKLEHLSFLLTTLLRQQPL-DVFTPETILVESPGMQHWVSMQMANKQGVAMNI 59 Query: 61 DFPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQ--LLEREDFTLLRHYLT 116 DFPLP F+W+ VL ++PK+S + ++ ++W++ +L L++ + F + Y Sbjct: 60 DFPLPVRFMWNTARTVLGADKVPKQSPYRREVLTWRIDNVLQDNALMDSDAFEQVNKYWQ 119 Query: 117 ----DDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKAL 172 + + QL++ AD+++QYL+YRPDWL +WE + + WQ+ +W+ L Sbjct: 120 SAGSEQEQGLQRLQLATALADVYEQYLLYRPDWLFKWENNER-AVFDDMEVWQSEIWRIL 178 Query: 173 VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGK 232 + H A L+Q +E LE+ P LP RV + I+ + P + AL + Sbjct: 179 AKDQ------PLHPARLHQMMLEALEAGNV-PAHLPKRVIVFAINTMAPQLIAFFDALAQ 231 Query: 233 HIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE 292 HI+IH+ NP YWG+ K + AKLL + + + + Sbjct: 232 HIDIHIFHLNPSVNYWGEAKSSSEQAKLLRLEGLKKWMEEDQS----------------- 274 Query: 293 QDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDN---------------LLHN 337 NPLL + GK GR+ LL++L++ E+ AF ++ LL Sbjct: 275 ----NPLLGNLGKQGRELFNLLTELDTF-EISAFDSPDFESAGEGEDEHGQCHSRGLLDY 329 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 I +DIL+ + + D S+T HS REV+VLHD LL L Sbjct: 330 IHNDILQAAHPQPLIHQSKN------------KDDSVTVMCTHSALREVQVLHDHLLHWL 377 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR-------YLPYAISDRRARQSHPV 450 +D T TP DI+VM I++Y+PF+ AVF LP I+DR + P+ Sbjct: 378 SQDKTRTPSDILVMCPAIENYAPFVDAVFHRVGTKSLGATGQVRLPCTIADRSPMDAEPL 437 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 + AF++LL LPDSRF D+L L + + RF ++++ + + W+ ++ I WG++ + Sbjct: 438 IAAFMALLQLPDSRFGVSDILDYLQLDSVQKRFSVSQDDIEQMVVWLKQAHIHWGLNSAH 497 Query: 511 VRE--LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 + ++W +G+ R+L+G ++ VL + G A +G L ++ Sbjct: 498 KTAVSEGVNLDDTYSWWWGIRRLLMGMLAPDSEMIVSDVLTIPDVEGQSALTLGKLIEVV 557 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 L + + L Q R E+W + +A F+P + + + LI + + A A Y Sbjct: 558 ALLGEFAQELTQPRTPEQWSKALIALRDACFMPTKDQQQSWDLIAKVAADLAARCEEANY 617 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + L +RD L R F+ G V +C+++PMRSIPFK VC+LG+ND +PR+ Sbjct: 618 EHELTLRQVRDLLLNRFSSPDAGNHFMTGQVTVCSMLPMRSIPFKKVCILGLNDSEFPRK 677 Query: 689 LAPLGFDLMS-QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 +PLG DLM+ + GDRSRR +DRYLFLEA+IS ++ LY+SY G + +NSER PS++ Sbjct: 678 SSPLGLDLMASDGRRVGDRSRRLEDRYLFLEAIISTRESLYLSYQGNDVTNNSERQPSLV 737 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 + E +D + ++ L PF + G SY WL Sbjct: 738 LAEFMDMLENNYAL--------------SLEKYAVHAPLHPFSEPVF-AGALPSYETGWL 782 Query: 808 PAASQ-----------------------AGKAHSEFVQPLPFTLPETVPLE--TLQRFWA 842 A A ++ Q + + L + R + Sbjct: 783 RLADALQHNKFGANAADTNENADVVDTSLDTATADISQSPRALATQALRLSNMQIARAFK 842 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD--------- 893 P+ F RL VN + + ++EPF L RYQ+ + ++ + Sbjct: 843 DPLEHFSIQRLGVNLSQSFTLLENSEPFETNALLRYQVLDAIFSSPERNNSSELDASELT 902 Query: 894 -AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQI 952 +E++ GD+P E + L+ + + + Sbjct: 903 YSEQVITFASLRGDIPNNPVAMDEVEMWKEGALALSQAMGPHDAEPKKAQFQ---GKYIT 959 Query: 953 TGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKD--------- 1003 D L+ + + + ++ L++ +S + + Sbjct: 960 FTTSALEGSDALVELCAGKVDAHRALGFFISQLIFSSSDETTSYTHYPLEIYACSWEKGE 1019 Query: 1004 ---GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLP 1039 + +F + E A+ L + + Y +AP V Sbjct: 1020 TILKKQKFAAVERETAVQLLLFIEQLYMAIYTAPTPVHL 1058 >UniRef50_A1SDB1 DNA helicase/exodeoxyribonuclease V, gamma subunit n=2 Tax=Actinomycetales RepID=A1SDB1_NOCSJ Length = 1113 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 302/1164 (25%), Positives = 502/1164 (43%), Gaps = 110/1164 (9%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG------ 55 L+++ ++R DVL + ++ L DPF E+++V + G+ +WL LS + G Sbjct: 3 LQIHRASRTDVLADALGDLLRT-PLADPFAEEVVVVPAKGVERWLTQRLSHRLGAGPRGD 61 Query: 56 --IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRH 113 + A + F P S + +L ++ ++ + + W L+ + + L +F L Sbjct: 62 DGVCAGVRFLNPRSLV-----SLLLGRERDDPWDPERLVWPLLATIDESLGEREFATLGR 116 Query: 114 YLTDDSDKR-------KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVE-----GLGEA 161 +L D + + ++ + A LF Y + RP + W G E GL Sbjct: 117 HLGHGVDGADGELRRNRRYSVALRLAHLFASYALQRPSLVTAWREGRDGEHGGEQGLPPD 176 Query: 162 QAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPP 221 AWQ LW+ L+ H + L++ P LP R+ + G + +P Sbjct: 177 LAWQPELWRRLIAQVDAPPPDVRH-----AQTCAALQAGGDGLP-LPDRLSLFGHTRIPV 230 Query: 222 VYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSE 281 + L+ALG+H ++HL P W D+ D Sbjct: 231 TEVALLKALGEHRDVHLFLPQPSPVLWDDLAD-----------------------LGGPG 267 Query: 282 NAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLL-----SDLESSQELDAFVDVTPDNLLH 336 D + VG+PLLAS G+ R+ LL ++ P LL Sbjct: 268 GVVPRAADDSVERVGHPLLASLGRDARELRRLLDGVSSEEVRPPAGTPTGSTTDPVTLLG 327 Query: 337 NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 +Q D+ N + R LDP D S+ H CH P R+V+VL + L+ + Sbjct: 328 WLQHDLR---------ANHAPSYDERSTRELDPDDHSLQVHACHGPARQVDVLREVLVGL 378 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD----RYLPYAISDRRARQSHPVLE 452 LE+DPTL PRD++VM DI++Y+P I A FG A D L ++DR ++P+L Sbjct: 379 LEDDPTLEPRDVLVMCPDIETYAPLISAGFGLATTDGHPAHRLRVKLADRALTSTNPLLA 438 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 LL L R + DVL L + RF T++ L + +WV +G+RWG+D+++ Sbjct: 439 VAGDLLDLAGGRVTASDVLDLAGTDPVRRRFGFTDDELDRVSRWVARAGVRWGLDEESRA 498 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV-LPYDESSGLIAELVGHLASLLMQL 571 + +TWR GL R+LLG AM LP D+ + +L G LA L+ ++ Sbjct: 499 AFRMERFPHNTWRTGLDRILLGVAMSGDDHHHLGRGLPLDDVASSEIDLAGRLAELVARV 558 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 + LA R + +W RD + + A+ + E++ A + G Sbjct: 559 DRTLTVLAGARTVADWATGLRDGVRSLVDVAADDAWQVPQFERELGR--AAASSHEGGLE 616 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 + L+ +R L RL F G + + T++PMRS+P +VVCL+G++DGV+PR A Sbjct: 617 LRLADVRAMLESRLAGRPTRANFRTGSLTVATMVPMRSVPHRVVCLVGLDDGVFPRAGAV 676 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 G D++ + P G+R R +DR L L+A+++A + L I+Y G Q + P+V + E+ Sbjct: 677 DGDDVLGRHPLTGERDVRSEDRQLLLDAVLAATEHLVITYSGADEQSGASLPPAVPLGEI 736 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 +D + + A V+ + H P+D +N+ S+ L A Sbjct: 737 LDAADR-------------TTNAPVRDRVLTRHPLQPYDARNFTRERPFSFDTAALAGAR 783 Query: 812 QAGKAHSE---------FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 A E + V L+ L+ F HPVRAF + RL V E Sbjct: 784 SARGVRREPPPLLDGPLPPRLALDGRAADVSLQDLRDFLGHPVRAFLRGRLDVATPFEPD 843 Query: 863 EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQ 922 ++ D P L+ L ++QI +LL L+ D + + AG LP G + + Sbjct: 844 DLADAIPVSLDSLEKWQIGDRLLRQLLAGQDPVAVLTAEQLAGTLPPRGLGTLALHEVAE 903 Query: 923 EMQQLADRVIACR-QPGQSMEIDLAC-NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL 980 E Q+L R R +S+++D+ +G ++TG +P V ++ S L+ Q + Sbjct: 904 ECQRLWSRTADLRDGERRSVDVDVDLRDGRRLTGTVPGVYGSRVVSLGYSRLNARQRLHA 963 Query: 981 WLEHLVYCASGG-NGESRLFLRKDGEWRFPPLAAE---QALHYLSQLIEGYREGMSAPLL 1036 W++ L A+ + + KD L +A+ +L L++ G+ APL Sbjct: 964 WVDLLALSATYPDQHWTAHAVGKDRAGPKRALCGPLDHRAVGWLRDLVDLRDRGLCAPLP 1023 Query: 1037 VLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ 1096 V ++G AW + M D ++ AR ++ + GE D ++QR++ Sbjct: 1024 VPVKTGAAWADAHAR---ELMGQDHPPVEAARREWETDPHNQFGITGEDADPYHQRVYGP 1080 Query: 1097 LTP---ETMEAIVEQSQRFLLPLF 1117 P + E + PL Sbjct: 1081 AAPVEALLDAGLGEHAWAIWEPLL 1104 >UniRef50_B1XZ24 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XZ24_LEPCP Length = 1294 Score = 625 bits (1611), Expect = e-177, Method: Composition-based stats. Identities = 361/1276 (28%), Positives = 529/1276 (41%), Gaps = 183/1276 (14%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L + H NRL++L + + L P E E++LVQS G+A+WL+M+L+Q+ G+ A Sbjct: 13 LLILHGNRLELLLETVLQWLAAHPLA-PLEEEVLLVQSNGIAEWLKMSLAQRVGVCAATR 71 Query: 62 FPLPASFIWDMFVRVLPEI--PKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD- 118 LPA F+W + +L P S +K ++W+LM +LP L R F L +L Sbjct: 72 VELPARFLWRCYRAMLGRAGAPARSPLDKGPLAWRLMRVLPALAGRPGFEPLAQFLAGPG 131 Query: 119 -------SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV----------EGLGEA 161 D + QL+ + ADL+DQY VYR DWL W G V L Sbjct: 132 GPTPDAAPDLPRRLQLAQRLADLYDQYQVYRADWLIDWAAGRAVLTNPCTGAAPVALDAE 191 Query: 162 QAWQAPLWKALVEYTHQLGQPRW---------------HRANLYQRFIETLESATTCPPG 206 Q WQA LW+AL+ + R ++ RF+ L Sbjct: 192 QRWQALLWQALIRDLGTTDADQPADAPAESAALAVLAGTRPAVHARFVAALAQDEAPQRP 251 Query: 207 LPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRR 266 LP RV + G S LP L+AL AL H ++ L NPCR++W D+ D L + R++ Sbjct: 252 LPRRVVLFGHSHLPAQTLEALAALAGHTQVILAVPNPCRFHWADMIDGRELLRSAHRRQP 311 Query: 267 HSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ----- 321 + +PLLA+WG+ GRD++ LL E Sbjct: 312 LRNGR-----------DLGALDIADAHAEAHPLLAAWGRQGRDFLRLLDAFEEQLGGAEA 360 Query: 322 --------ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS 373 +D F D D LL +Q+ I + A + R D S Sbjct: 361 GALRGELPRVDLFDDEPGDTLLAQVQARIRDAVPLAEHAALNGPPLDAAAARQRAATDRS 420 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPT-LTPRDIIVMVADIDSYSPFIQAVFGSAP-- 430 I FH+CHS REVEVLHD+LLA L L PRDI+VMV D++ Y+P ++AVFG P Sbjct: 421 IEFHLCHSAMREVEVLHDQLLARLAAAKGSLAPRDIVVMVPDVEVYAPLVRAVFGQYPAS 480 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 R++PY I+D R R HP+L A LL + + R + ++ L+DV LA RF + + L Sbjct: 481 DARHIPYDIADLRPRGHHPLLLALEWLLRITEQRCTASELRELIDVAALANRFGLEGDDL 540 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPAT-GQHTWRFGLTRMLLGYAMESAQ-----GEW 544 L +W++ +G+RWG+D ++ L+L A +TW FGL RMLLGYA+ W Sbjct: 541 PTLGRWLDGAGVRWGLDAEHRASLDLAACGEANTWAFGLRRMLLGYAVGDDPAATPGEPW 600 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 + PY E GL A + G LA L+ L W R +W R +L AFF P E Sbjct: 601 HGIAPYAEVGGLEASIAGALAELVEALQRWWREARTAATPADWDARARALLAAFFRPATE 660 Query: 605 TEA-AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 E + + A Y +AVPL++LR+ +D+ + RFLAG V CT Sbjct: 661 DERLLLAALHDALAQWREACDEAGYAEAVPLAVLREAWLGTVDEPGLRSRFLAGGVTFCT 720 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY--LFLEALI 721 LMPMR+IPF+ VCLLGMN+G YPR+ FDL++ +R R D L LEAL+ Sbjct: 721 LMPMRAIPFQGVCLLGMNEGDYPRRGVRSDFDLLAAPGQRRPGDRARRDDDRMLMLEALL 780 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 SA+ +L++S+IGRS++DN+ + PSVLV +L DY+ P + L+ Sbjct: 781 SARAQLHVSWIGRSVRDNTAQPPSVLVAQLRDYLAAGWGRP-------------LVDALS 827 Query: 782 CLHTRMPFDPQNYQPGERQ---------------------------SYAREWLPAA---- 810 H PF + ++ Q +YAREW A Sbjct: 828 VEHPLQPFSRRYFEQTVEQGEPVDGPADETGDETGNDTAALRRGLLTYAREWRAAHARED 887 Query: 811 ------SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 A + + + L L RF +PV RL V D + Sbjct: 888 AAAAASDPLTAAPTPIDRRPAPADQPPLKLAMLTRFLRNPVADHLNERLGVRLALADEAL 947 Query: 865 PDTEPFILEGLSRYQINQQLLN-----------------------ALVEQDDAERLFRRF 901 D EP L L + ++L+ A Q + Sbjct: 948 ADDEPLGLHALDESILLRRLVEQGDVQTAQLPASAPAADPESDADAARLQRALQDGSLSL 1007 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC------RQPGQSMEIDLAC---NGVQI 952 + G LP GE + + ++ + + R Q + + L +QI Sbjct: 1008 QRQGILPLAGLGERWQQAFVRQSLPMLAQWRIWQEAAPERAAPQPLNLALPLADGGALQI 1067 Query: 953 TGWLPQVQ---PDGLLRW--------------------RPSLLSVAQGMQLWLEHLVYCA 989 WL +Q G L W + + + + WL ++ Sbjct: 1068 DDWLDGLQIEATTGALLWLDLQASRLCAKPGKKDQGKGKAGPVRPDKLYRAWLV-MLAAG 1126 Query: 990 SGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTC 1049 + G + + +D P AE A L+ L + APL + P S A L Sbjct: 1127 AAGIALTGRIVGRDVTLELSPPPAEVARAALADLTGAWWASWRAPLAIAPRSALAALAEA 1186 Query: 1050 YDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVR---GEGDDIWYQRLWRQLTPE--TMEA 1104 + A + Y+G R E D+ R++ + Sbjct: 1187 PVLADADPSGPRPWPLDAWIAAERTYDGGTFTRRVPPESDEPSLARVFADWEALGARADE 1246 Query: 1105 IVEQSQRFLLPLFRFN 1120 ++R PL + Sbjct: 1247 FQHWAERLYRPLRAWA 1262 >UniRef50_A1KCB8 DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease n=3 Tax=Betaproteobacteria RepID=A1KCB8_AZOSB Length = 1139 Score = 622 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 329/1188 (27%), Positives = 518/1188 (43%), Gaps = 129/1188 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M + SNR + L+A++ + ER PF ++V S+ + + +++ +++ G+ AN+ Sbjct: 1 MFSIVFSNRYECLQAMLLERLAAERPG-PFGKRHVVVPSSALRRDVELAVAEHEGVCANV 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDF----TLLRHYLT 116 +F A ++W V+ E+P S F ++W++ LL D+ L HYL Sbjct: 60 EFSYLAQWLWTQIGHVV-EVPARSPFAPALLAWRVHALLDPAAPAGDWVAAHPRLAHYLA 118 Query: 117 DDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGH------LVEGLGEAQAWQAPLWK 170 +D R F+L+ + A +FD YL YR WL W G E +AWQA LW+ Sbjct: 119 G-ADARMRFELAERIARVFDHYLTYRAHWLESWARGERARLGEATEAERADEAWQAALWR 177 Query: 171 ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL 230 + + L + H A L+ R + ++ GLP V + G+ ALPP+YL L+ L Sbjct: 178 HIRD---GLALRQEHPAALFLRRVAGMDERALAAAGLPQTVHVFGLPALPPLYLAILREL 234 Query: 231 GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 + +++ L NPCR +W +I DP L+ L RQ +D Sbjct: 235 ARVVDVRLYALNPCREFWFEIVDPRRLSWLAARQ------------------------AD 270 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQ-ELDAFVDVTPDNLLHNIQSDILELENRA 349 + GN LLA+WG+ + +I LL + E E F +LL + + IL++E Sbjct: 271 MFHETGNRLLAAWGQQTQAHIGLLFEGEREVVEEALFEPHPGRHLLARLHNAILDMEELE 330 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE----EDPTLTP 405 V + D SI HVCHS RE+EVLHDRLL +++ L P Sbjct: 331 PGSVALA------------ANDRSIELHVCHSRTRELEVLHDRLLDLMKAAAKRGEPLRP 378 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 +I+V+ D+D+ +P I+AVFG+APA R +P+ I+ Q +PV A LL+L R Sbjct: 379 DEIVVLTPDLDATAPLIEAVFGTAPAARRIPWRITGLGGTQENPVAAALDRLLALVAGRL 438 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE---LPATGQH 522 + V LL PV+AARF + E L + W+ +GIRWG+D ++ + A G H Sbjct: 439 PASAVFDLLQQPVVAARFGLGEGDLETIHDWMRAAGIRWGLDAEHAAAAGGVPVQACGGH 498 Query: 523 TWRFGLTRMLLGY--AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 T GL R+ LG+ + + + + G A +G L + L R L + Sbjct: 499 TLDAGLDRLFLGWAAGDAATAAPFAGFIGAGAAEGNAALALGRLWRYVDTLRGLRADLQR 558 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA----EGLGAQYGDAVPLSL 636 + W L + E A+ + + A+ A+PL++ Sbjct: 559 PQQAAGWRRALDSALTRLVGDEPEWAEALREVREAIVALTQAMAAAATDDGDAPAIPLAV 618 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + L +LD G V L +R +P++VVC++G++ G++P P FDL Sbjct: 619 VHPALIAQLDD-PARGGVPGGTVTFSALSSLRGLPYRVVCVVGLDQGLFPGSDRPAEFDL 677 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 M+ +P+RGDR RR DDR LFL+ L+SA++ L++S++GRS++D S PSVLV EL D + Sbjct: 678 MAARPERGDRQRRHDDRNLFLDVLLSAREVLHLSHVGRSVRDGSALPPSVLVDELFDVLA 737 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY-----QPGERQSYAREWL---- 807 + + + A + LT H F + + + SY E+ Sbjct: 738 AACAADPGKP----DDLAAARRRLTVEHPLQAFSAEYFLPQGERDPRLVSYHEEYAAALA 793 Query: 808 ----------------------PAASQAGKAHSEFVQPLPFTLPE--TVPLETLQRFWAH 843 + G F PLP PE V L L RF+ + Sbjct: 794 ARLGAPLRDADDDALVALAEEGDEVAVDGARVPFFDAPLPPPGPEWREVGLPQLIRFFRN 853 Query: 844 PVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD--DAERLFRRF 901 P R + RL + ++E+ D EP + + L R + ++LL AL+ D E L Sbjct: 854 PSRYLLRDRLGLALPEGEAELEDVEPMVPDFLGRQALAERLLPALLGATVPDEEALLALA 913 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG------QSMEIDLACNGVQITGW 955 RA G+ P GA GE + ++ A V A ++ DL + Sbjct: 914 RAGGEYPAGALGEGALRRELAQLTVFAAGVRAELPARPLPPHVPTLAFDLDGEPWTLGAA 973 Query: 956 LPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGES--RLFLRKDGEWRFPPLAA 1013 ++P GLLR R + WL HLV CA+ + L +DG RF + Sbjct: 974 FGDLRPQGLLRQRYDDCRPVDYLAAWLAHLVLCAAPAPDVACETTLLARDGRCRFVAVPP 1033 Query: 1014 EQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQ 1073 A L+ + YR G+ PL P++ A+ + ++ KA ++ Sbjct: 1034 ATAHALLADCLRLYRAGLLRPLHFFPKAAWAYA------------VNGESMGKAYARWQG 1081 Query: 1074 AYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 GN E D Y+ R + + + R L PL Sbjct: 1082 ---GNRPAFAESADPAYRLALRGVADPLADDFAALASRVLGPLLDHLD 1126 >UniRef50_B5JHV1 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHV1_9BACT Length = 1133 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 262/1129 (23%), Positives = 459/1129 (40%), Gaps = 63/1129 (5%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L ++ SNR++ L A + I + L P E ++ + G+A+WLQ +++ G++ D Sbjct: 35 LYLHTSNRVENLAARLVEICQAVPLSRPLSQETVMTLNPGIARWLQFEIAKATGVSFGWD 94 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 FPLP + P F + WKL+ +L L ++ F +R Y ++ Sbjct: 95 FPLPGKLFARVLRGFEPGFDTNGVFPEDLARWKLVEILSTLEDQPRFAQVRAYCQT-AEG 153 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 +++ L+D+YLVYRPD + QWE WQA +W+ LV + + Sbjct: 154 SHRLAFANRLTRLYDEYLVYRPDIVTQWEDDPGSSNFD----WQAEIWRRLVRLVYPKNR 209 Query: 182 PRWHRANLYQRFIE-TLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 H A ++Q + P P R+ + G+S+L P+YL L L ++ +H+ Sbjct: 210 KPRHIARVWQDLSRGQILELGLQPQAWPERLLVFGVSSLAPLYLDLLDQLARYRPVHIFL 269 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 P YW D+K + K+ + + D + GN LL Sbjct: 270 LQPSDMYWADLKTTKQIQKIAMKAAGET-------------GNRITSPEDWLYETGNALL 316 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL-LHNIQSDILELENRAVAGVNIEEFS 359 S GK + ++ LL D Q+ AF ++ L +QSD+ +E+R +A Sbjct: 317 PSLGKQSQMFLDLLIDKNPQQDDTAFEPPFDESSQLACLQSDLFTIEDRDLA-------- 368 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 D ++ H C +REVE + D ++ L+E+P L +I+VM DI +Y Sbjct: 369 --KGGDAFSAYDGTLQVHSCSGRRREVETVWDLIVRRLDENPELKASEILVMAPDIQAYR 426 Query: 420 PFIQAVFG-SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 I+AVF +P++++D A V ++L R S +VL LL+ P+ Sbjct: 427 SHIEAVFRSKRGTHLEIPFSVADNSAGNRPGVFSGIFAILQSASGRASSAEVLELLECPL 486 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 L + +++ L + W+ E GI WG D D+ + E AT ++TW +R+ G A Sbjct: 487 LREVYSFSDQDLERIEFWIRELGITWGWDSDHRDQRESFATDRNTWSELRSRLSAGIAFS 546 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 S + L Y E G ++E G L L L R Q L W ML Sbjct: 547 SEVETPKGFLAYSEIEGELSETAGRLLECLDLLGSLRHNFRQTHSLAVWQDRLLAMLATL 606 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 + + + + L ++L +L+G Sbjct: 607 KSQRDDWQRDYVQASDMIHETLPALDDVFATGSEAYRALSEKLESSASGG----GYLSGG 662 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 V C+L PMR+IP VC++GMN +PR+ L FDLM+++ + GDR+ RD+DR FLE Sbjct: 663 VTFCSLKPMRAIPADTVCIMGMNRLDFPRRSNRLSFDLMAKESRIGDRNTRDEDRQFFLE 722 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 L+S + +I+Y G S ++ PS +++EL+ Y+ + L Sbjct: 723 TLLSVRSHFFITYQGTSSNSDTVNEPSAVLEELLSYLETAMPLEDF-------------K 769 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE-------T 831 + R FDP +Q +Y + ++ + + + L + Sbjct: 770 RILTQQKRQSFDPVYFQNDRNGTYDPDRAALRNRFNGLQTSEAKAVSTELEQTQGEEISE 829 Query: 832 VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ 891 + L+ L RF++ P +AF +V +E+ + +++ + GL R+QI + + Sbjct: 830 IELDALIRFFSDPAKAFASNVSKVKLVSEEDALEESDALLSGGLDRFQIRNEFAERIARG 889 Query: 892 DDAERL-FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGV 950 + E L + LP G + ++ + QLA+ + + +DL G+ Sbjct: 890 EPLEELSIKALSQRKLLPAGLLETPTFASEYERAAQLAESIGNVETSTHYVSVDLE--GI 947 Query: 951 QITGW-LPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN--GESRLFLRKDGEWR 1007 + G +++ + L + + W+ HL + + GE+ LF + Sbjct: 948 TLLGESTTRLEDGRQVLIHAGELKPKRVVDAWIRHLFAASLDPHFSGETYLFSLHEKGSP 1007 Query: 1008 FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYD-AQNDAMLDDDSTLQK 1066 E L+ L + + G +PL P + + L++ Sbjct: 1008 IRLGQVENPRKLLADLAQAFASGQRSPLPFFPVLSYNAFRAWNSCSSESEDERIGEALER 1067 Query: 1067 ARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLP 1115 AR + + R + + + EA V+ + F P Sbjct: 1068 ARKDLRASQVDSDYPRSYTWSAYDRICFGDQFEP-DEAFVKLAVAFWSP 1115 >UniRef50_Q6ANK2 Related to exodeoxyribonuclease V, gamma chain n=1 Tax=Desulfotalea psychrophila RepID=Q6ANK2_DESPS Length = 1056 Score = 617 bits (1592), Expect = e-175, Method: Composition-based stats. Identities = 303/1134 (26%), Positives = 495/1134 (43%), Gaps = 93/1134 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML ++ SN + L ++ I++RE + F E+ L+QS G+ + + L+ +F N Sbjct: 1 MLHLHISNHTEKLLEILAAIIKREGRANLFAREIFLIQSPGVERTVCQYLADEFKSWCNF 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DF LPA + + + ++ + F Q+ W+L LL + + + + L+ Y++ + Sbjct: 61 DFLLPAGLLRKIASSLYVDL-ETDLFASQTTVWRLEALLRDI-DEDIYLPLKKYVSGEVA 118 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + K +QL+ + A LFDQY + RP LA+W G V + + WQ LW+ LVE Sbjct: 119 ELKRYQLAGQIAQLFDQYQLMRPSMLARWRLGQRVTE-EDCEIWQMHLWQRLVEEF---- 173 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 H+ + + IETLE C LP R+F+ G+ + P++L+ LQAL E+HL Sbjct: 174 PAARHQGEILENIIETLEKE-ECQRRLPRRIFVFGLHTMAPLFLKFLQALSSRTEVHLFL 232 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 +PCR YWG++ + L + + S E++ LL Sbjct: 233 LSPCREYWGEV-----------------GRGGDRLLSLEGIRDSGVDLSSYEEEEPQQLL 275 Query: 301 ASWGKLGRDYIYLLSDLES-SQELDAFVDV---TPDNLLHNIQSDILELENRAVAGVNIE 356 AS G+ GRD+ +L S + + + +P +LLH +Q DILE A Sbjct: 276 ASLGRQGRDFQQMLVASAGYSIDSALYQGLGAGSPPSLLHVLQGDILERGRLA------- 328 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 D S+ CHSP RE+ VL D +L +L +D +L RDI+VM DI Sbjct: 329 ---------VTAARDDSLRIVSCHSPLRELAVLKDHILDLLYKDASLQLRDIVVMAPDIQ 379 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y+P I A+F + Y+I+DR Q + V+ F+ L+L RF +VL LL Sbjct: 380 EYAPLIPALFAD------IQYSIADRATGQRNTVMAVFLDYLNLFSGRFGWSEVLDLLRS 433 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 + ++F + E L++WV ESGIRWG+ + +EL LP +TW GL R+LLG+A Sbjct: 434 EHIYSQFSLGEGDFDLLQKWVTESGIRWGLSAEQRQELGLPPLELNTWLAGLQRLLLGFA 493 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 M A + VL Y + G A+ +G L L L + R L EW + + Sbjct: 494 MS-ADTMVEGVLAYSDIEGNSAQALGGLCEFLQVLQGGQELYTTPRLLHEWAELLQGDAE 552 Query: 597 AFFLPDAETE-AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 F + + + I Y + ++ L Q Q S FL Sbjct: 553 RLFGGEENSAHQELQQILAGLGRGREYQGVLLYSQPIAFQVVMAWLQQASAQVGSSAGFL 612 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 G + C+++PMRSIPF+V+CLLG+N+G +P+Q FDL++ KP+ GDRS R DDRY Sbjct: 613 RGQLTFCSMLPMRSIPFRVICLLGLNEGKFPKQDKQATFDLLASKPELGDRSPRIDDRYQ 672 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 FLEALIS + LY+SY+GRSI++N E PS + + + A Sbjct: 673 FLEALISVRDSLYLSYVGRSIKNNGEIPPS--------------VVLCELLDLLECKFAI 718 Query: 776 VKAHLTCLHTRMPFDPQNYQ-PGERQSYAREWLPAASQA----GKAHSEFVQPLPFTLPE 830 + PF + ++ + SY L A + G + E Sbjct: 719 KPEDIVVEQPLHPFSSKYFEGRADLFSYNENCLTLAQKIYGGGGGEERPWWSGNLGRPQE 778 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE 890 + L + F+ +P R F L++ DTE F GL RY + Q L+ L+ Sbjct: 779 NIYLADMVSFYKNPQRWFVSRSLEIRLGASSDLPDDTETFSASGLDRYLLEQGLVEDLLA 838 Query: 891 QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG--QSMEIDLACN 948 + ++ G P G G + ++ E+ + + + Q++ ID Sbjct: 839 GREVADIYHGLAIEGRWPQGTPGSLLFKKLLTELDEFTNSIRQIDPGPIIQTLPIDQRIG 898 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRF 1008 ++ G + ++ +G+ R + ++ WL HLV + + L + KDG +F Sbjct: 899 PYRLLGKV-ALRQNGIFLHRYANRKGKDLLEAWLYHLVAGRERPDIITWL-VCKDGVLKF 956 Query: 1009 PPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKAR 1068 +E+ L +E + G++ E+ A+ C + Sbjct: 957 SEQPSEE---MLLLYLEHFAFGVNTLSSFQVEAAYAYSLHCQKKSKKTPM---------- 1003 Query: 1069 TKFLQAYEGNMMVRGEGDDIWYQRLW-RQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 + +G++ G + + +LP++ + Sbjct: 1004 QVAEETLKGSVTK---GYEPELALAISGGVEEFLAGEFERYCIELMLPIWEYAD 1054 >UniRef50_B0TXZ0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Francisella philomiragia RepID=B0TXZ0_FRAP2 Length = 1100 Score = 616 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 281/1141 (24%), Positives = 509/1141 (44%), Gaps = 100/1141 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L Y SN+L+ L ++ +++ E+ D F P ++V S GM WL M L+Q IA N+ Sbjct: 3 LYTYPSNKLEYLVQVLSKLLDVEKK-DFFTPTQLIVGSRGMQHWLSMQLAQYRNIAMNLK 61 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 + + +I D+ + + + A+ K ++W++ L + L+ Y + Sbjct: 62 YDMINGYILDICYELTAKQEYKKAYTKDILAWRIFRSLDSINN----PKLQEYYHNS--D 115 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEG--LGEAQAWQAPLWKALVEYTHQL 179 K +QLS K A +F Y++YR +WL +WE G + + WQ LW+ALV+ Sbjct: 116 LKKYQLSVKIAQVFTMYIMYRAEWLQKWEQGEYINPAKPENDEDWQMQLWQALVKEVQDT 175 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 + ++ L +P ++I G++ + P L + L K+I++++L Sbjct: 176 PYK------VQAEALQKLNQQNLEKLNIPKDIYIFGVNTISPKNLSFVFELAKYIDVNIL 229 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 + NPC YW D+ A L + PL Sbjct: 230 YINPCSEYWYDLHKSKISAWLDSNDYEL-----------------------------QPL 260 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 LA+ G+ G+++ L + + QEL+ F ++L +D N+ Sbjct: 261 LANLGQQGKEFFNQLLENQEKQELEVFEKFDKNSLDFEKLAD----NNQTQLVSLQRNLL 316 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 D + D SI+ + CHSP REV++LHD+LL M++ DP++ PRDI+VM +I+ YS Sbjct: 317 ELDCQNHAKQKDLSISINSCHSPLREVQILHDKLLDMIKADPSIKPRDILVMCPNIEDYS 376 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 P+I +VF D+ LP +I+DR S P+ +FI LL LP+S F +L L VP + Sbjct: 377 PYIDSVFSRFSTDKKLPCSIADRTLLDSEPLAASFIELLQLPESNFEVNKILDYLSVPAI 436 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 +F IT+E L +R W+ ES I + +W +GL R++ G++ Sbjct: 437 QQKFKITDEQLETIRYWLKESCIHHSNNG-----------QTFSWSWGLKRLMFGFSYSD 485 Query: 540 AQGEWQSVLP--------------------------YDESSGLIAELVGHLASLLMQLNI 573 + LP G +G L LL L Sbjct: 486 SNHIVDLKLPRQSATATPSYQRGISINYQELDQLMTIPVIEGSEIAELGGLYELLELLEK 545 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 + + L + R LE W +M + F + + I+ + + + Sbjct: 546 YSQELLKPRSLEAWQDYLLEMFDDVFNVTNDEQYIAKKIKDIIVKTVTTAKDVLLTEEID 605 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L +R L +L + I+ FL G V C++ PMR++PF+V+ +LG+N+G +PRQ + + Sbjct: 606 LYTIRYCLISQLSEPIINNHFLNGKVTFCSMTPMRNVPFRVIAMLGLNNGKFPRQESAIS 665 Query: 694 FDLMSQKPK-RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 FDLM++ + +GDR++RDDDRYLFLE + SA+ LY+SYIGRS++ N E+ PS++++ELI Sbjct: 666 FDLMARLGRVKGDRTKRDDDRYLFLETITSARDYLYLSYIGRSVKTNVEQQPSLILKELI 725 Query: 753 DYIGQSH-YLPGDEALNCDESEARVKAHL---TCLHTRMPFDPQNYQPGERQSYAREWLP 808 Y+ +++ + D + ++ + ++ + PF + Y E +SY WL Sbjct: 726 SYLQKNYSWHTLDNVIKDNKLPKSERKNIISDIKEYPLHPFSSKCY-ADEYRSYDEAWLK 784 Query: 809 AASQAGKA-HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 K + + LP+++ + L + + P++A+ L++ + E+ D+ Sbjct: 785 LLQSEPKVFYDSKLLSNSVNLPKSLSISKLVKIFEDPIKAYTNYGLELYLEDDFEELEDS 844 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 EPF + L +++ Q LLN L D E + + +G LP E + + +Q+L Sbjct: 845 EPFDINSLDKHKFKQDLLNTLENNKDKELTIKTAKLSGKLPESVLTENEINKEVESIQKL 904 Query: 928 ADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVY 987 D+ + ++ ++ ++ + +L + S + +L+L L+ Sbjct: 905 LDKANLANYESKYFHQEILGYELEANC---HIKDNQVLLYTSSTFGIKHRFELYLTALLV 961 Query: 988 CASGGNGESRLFLRKDGEWRFP-----PLAAEQALHYLSQLIEGYREGMSAPLLVLPESG 1042 S S ++ D + ++ A L + + + +S P LV + Sbjct: 962 ALSEQQDISATYVYFDKDKNQADTNTFAISHLGAKQLLEKYLSNAEKIVSKPSLVHLDLA 1021 Query: 1043 GAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETM 1102 A ++ + Q + T ++ + + + + ++ Y +L+ P+ Sbjct: 1022 KAIMEYVKENQKKDASLVEKTTKQKQQAWENVIKSSETNYKALENNSYFKLFYSEHPKIE 1081 Query: 1103 E 1103 + Sbjct: 1082 D 1082 >UniRef50_B5EPU5 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EPU5_ACIF5 Length = 1130 Score = 609 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 343/1178 (29%), Positives = 525/1178 (44%), Gaps = 121/1178 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 V H +RL+ L + + L P E E+ LVQS G+A+WLQ TL+ GI A + Sbjct: 10 FIVLHGDRLEWLSDAVLEWLRAHPL-RPLEEEIFLVQSNGIAEWLQWTLAAHEGICAAVR 68 Query: 62 FPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD-- 117 LP F+W+ + RVL + S +K ++W+LM LLP+LL DF LRH++ Sbjct: 69 VALPGRFLWESYARVLGTGIVSARSPLDKAPLTWRLMRLLPELLAHADFAPLRHFIGQSQ 128 Query: 118 --DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEG--------LGEAQAWQAP 167 D + +Q++++ ADLFDQY VYR DWLA W T + L Q WQ Sbjct: 129 RPDGALERRWQMAAQIADLFDQYQVYRGDWLADWTTDQSLLRRGDGERVTLPADQRWQPR 188 Query: 168 LWKALVEYTHQLGQPRWH-RANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQA 226 LW+AL + H G + RA ++++F+ L + LP RV I G + LP L A Sbjct: 189 LWQALRQDLHSRGLDQAPGRAQVHEQFLAALNAGRPPVTPLPRRVVIFGAATLPEQSLTA 248 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 L ALG+ +++ L NPCRY+W DI L + R++ + Sbjct: 249 LAALGRQMQVILAVPNPCRYHWADIVSGRELLRRERRRQPPRNG-----------HDLSA 297 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ---------ELDAFVDVTPDNLLHN 337 ++ GNPLLA+WG+ GRD++ LL + + +D F + D LL Sbjct: 298 TATEDLHQFGNPLLAAWGRQGRDFLDLLDQFDETAALQRQMDIPRIDLFSEDQGDTLLRQ 357 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 +Q I +LE LD D S+ FH+ HS REV++LHD+LL Sbjct: 358 LQVQIRDLEGIRPETC-----------TALDDNDHSVVFHIAHSALREVQILHDQLLDRF 406 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA--DRYLPYAISDRRARQSHPVLEAFI 455 L PRD+IVMV +I ++P I+A F RY+PY I D +AR P+L A Sbjct: 407 ATGK-LQPRDVIVMVPEIGGFAPLIRATFDQYDREDRRYIPYHIVDLQARDEQPLLLALD 465 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 LL LP+ R ++ LL+ P L RF + E L ++ W+ +G RWG+ ++ L Sbjct: 466 WLLRLPEQRCRQSEIRDLLNCPALRRRFGLELEDLPIVQHWLAGAGWRWGLSAEHRAALG 525 Query: 516 LPAT-GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 +P Q++ F L R+ LGYA + + Y E GL A L+G L LL +L W Sbjct: 526 MPHCGSQNSGDFALQRLCLGYASGD-DSHFSGIEAYGEVGGLDAALLGPLGQLLEKLAHW 584 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA-MTLIEQQWQAIIAEGLGAQYGDAVP 633 + L + E W R++L FF + + A + +E+ + + A + +A+P Sbjct: 585 QHVLGESLVPEHWGEAARNLLTDFFSASDDDDEALLQNLEEALRQWQTDCAAADFNEALP 644 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L++ R + LD + + FL G V CTL+PMR++P+ +VCLLGMN+G YPR+ Sbjct: 645 LAVFRGAWLEMLDAPDLGRSFLGGGVTFCTLLPMRAVPYPLVCLLGMNEGDYPRRSPRPD 704 Query: 694 FDLMSQ--KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 FDLM+ + GDRSRRDDDRYL LEAL++A+++LY+S+ GR ++N ER PS+LV +L Sbjct: 705 FDLMALPGMARPGDRSRRDDDRYLMLEALLAARRELYVSWAGRDQRNNHERAPSLLVAQL 764 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ-PGERQSYAREWLPAA 810 + I T H PF P +++AREW P+ Sbjct: 765 REAIRDGW--------------PPALEKRTFEHPLQPFSPDYLAGKPGLRTWAREWYPSP 810 Query: 811 SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 A + P P + + L F+ P RAF++ RL+ +F ED D EPF Sbjct: 811 HSAPE---NAALPDPAEITPR-SIRELLEFFRLPARAFYRQRLRTDFNEEDPAEEDDEPF 866 Query: 871 ILEGLSRYQINQQLLNALVEQDD--AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLA 928 L+ L Y + + LL A + R R +G P ++ + Sbjct: 867 TLDSLETYHLLEDLLRAAEKNGPDRIAERVRAQRRSGRYPLAGMASRTATALLDDVTPVL 926 Query: 929 DRVI----ACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGM------ 978 Q + A + + WLP + + L ++ + Sbjct: 927 TVWREIGTEWTAAPQRRVVHRARGRILLEDWLPALYQNNAGDLAFVQLRASRLLNKDSKK 986 Query: 979 ------QLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMS 1032 + + G + + +D R P + L L++ ++EG+ Sbjct: 987 PEGDKLAALWLQQLLANAVGLRCGGIVVGRDVLVRAAPPPPGA-IAALDDLLDLWQEGLC 1045 Query: 1033 APLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGE-GDDIWYQ 1091 PL V ++ L+ A Y+GN + GE D+ Sbjct: 1046 EPLPVTLKTALVSLQGKNPA--------------------PIYDGNDRLPGEARKDLSLF 1085 Query: 1092 RLWRQLTPETMEA-------IVEQSQRFLLPLFRFNQS 1122 R + + E + P + ++ Sbjct: 1086 RDYPDFATLSSARTGPQRRGFAEYAAALYRPFAGWLET 1123 >UniRef50_Q14GK3 Exodeoxyribonuclease V gamma chain n=16 Tax=Francisella RepID=Q14GK3_FRAT1 Length = 1079 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 280/1148 (24%), Positives = 513/1148 (44%), Gaps = 124/1148 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L Y SN+L+ L ++ +++ E+ D F P ++V S GM WL M L++ IA N+ Sbjct: 3 LYTYPSNKLEYLVQVLSKLLDVEKK-DLFTPTQLIVGSRGMQHWLNMQLAEYRNIAMNLK 61 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLER---------------- 105 + + +I D+ + + + A+ K ++W++ LL + Sbjct: 62 YDMINGYILDICYELTAKQEYKKAYTKDILAWRVFRLLSSQNQEKNTHSHAGGNLIADGL 121 Query: 106 --------------EDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWET 151 + L+ Y D K +QLS K A+ F +Y+ YR +WL +WE Sbjct: 122 SSKDTSLCGYDNRDGWSSKLKEYYQDS--DLKKYQLSVKIAETFSKYISYRSEWLQKWEK 179 Query: 152 GHLVEG--LGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPS 209 + L + WQ +W+ LV+ + + ++ L+ + S Sbjct: 180 DEYINPSKLENDEDWQMLIWQNLVKDIAETPYK------VQLEALQKLDKQNLEKLNISS 233 Query: 210 RVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSF 269 ++I G++ + P L+ + L K+I +H+L+ NPC YW D+ A L Sbjct: 234 DIYIFGVNTISPKNLKFIFELAKYINVHILYINPCSEYWYDLHKSKISAWL--------- 284 Query: 270 EDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV 329 D + PLLA+ G+ G+++ L + E QEL+ F Sbjct: 285 --------------------DSDDYEIQPLLANLGQQGKEFFNQLLENEQQQELEVFEKF 324 Query: 330 TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVL 389 ++L +D N+ D + D SI+ + CHSP REV++L Sbjct: 325 DKESLAFEKLAD----NNQTQLVSLQRNLLELDCQNHTKQKDLSISINSCHSPLREVQIL 380 Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 HD+LL M++ DP + PRDI+VM +I+ YSP+I +VF P D+ LP +I+DR S P Sbjct: 381 HDKLLDMIKADPNIKPRDILVMCPNIEDYSPYIDSVFSRYPTDKKLPCSIADRTLLDSEP 440 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 + +FI LL LP+S F +L L VP + +F IT+E L +R W+ ES I + Sbjct: 441 LAASFIELLQLPESNFEVNKILDYLAVPAIQQKFKITDEQLEAIRYWLKESCIHHSNN-- 498 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS-VLPYDESSGLIAELVGHLASLL 568 +W +GL R++LG++ + ++ G +G L LL Sbjct: 499 ---------DQTFSWSWGLRRLMLGFSYSDSNYIIDDKLMTVPVIEGSEIAELGGLYELL 549 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 L + + L + R L W +M + F + + I+ + Sbjct: 550 ELLERYSQNLLKPRSLANWQVYLLEMFDDVFDVTNDEQYIAKKIKDIIAKTVTTAKNILL 609 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + L +R L +L + I+ FL G V C++ PMRS+PF+V+ +LG+N+G +PRQ Sbjct: 610 DQEIDLYTIRYCLISQLSEPIINNHFLNGKVTFCSMTPMRSVPFRVIAMLGLNNGKFPRQ 669 Query: 689 LAPLGFDLMSQKPK-RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 + + FDL+++ + +GDR++RDDDRYLFLEA++SA+ LYISYIGRS++ N E+ PS++ Sbjct: 670 ESAISFDLIARLGRKKGDRTKRDDDRYLFLEAILSARDYLYISYIGRSVKTNVEQQPSLI 729 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 ++EL Y+ ++ ++ + F + Y +S+ + WL Sbjct: 730 LKELTSYLNLNYDWGKED---------------IKEYPLHAFSSKCYS-DSYRSFDKAWL 773 Query: 808 PAASQAGKA-HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 + + LP+ + + L + + P++A+ L++ + E+ D Sbjct: 774 KLLQSEPRGFYDSASLSNCANLPKNLSISKLVKVFDDPIKAYANYALELYLEDDFEELED 833 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 +EPF + L ++++ Q LL ++ D + + + +G LP +I + + + +Q+ Sbjct: 834 SEPFDINSLDKHKLKQALLKTFEDEKDKDLTIKTAKLSGKLPESVLTDIEIKEEVENIQK 893 Query: 927 LADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV 986 L D++ + ++ ++ ++ + ++ PS L++ + +L+L L+ Sbjct: 894 LLDKMSLASYESKYFHQEILGYELEANCYIKN---NQIMLSTPSSLNIGKKFELYLIALL 950 Query: 987 YCASGGNGESRLFLRKDG----EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESG 1042 S S ++ + E+R + A L I + + P L + Sbjct: 951 VAYSEQRDISAVYYGIEKNQVEEFRVENIEYTTAKGILEHYINQAEQIVVKPQL----AH 1006 Query: 1043 GAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRL---WRQLTP 1099 + + D++N+ D Q+A K +++ + N D+ +++ + + Sbjct: 1007 LSLAEAICDSKNNT----DKKKQQAWQKVIKSSQHNFKTL--EDNSYFKLFYNKFPTVDD 1060 Query: 1100 ETMEAIVE 1107 E I + Sbjct: 1061 FEGEKIYK 1068 >UniRef50_UPI0000E0F593 exodeoxyribonuclease V, gamma subunit n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0F593 Length = 1147 Score = 603 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 285/1181 (24%), Positives = 502/1181 (42%), Gaps = 115/1181 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVE---RERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIA 57 M V SN+ ++L ++ ++ ++ + FEP I+V+S GM +L M +++K G++ Sbjct: 1 MFHVVPSNKQEILTQVLISFIQDDYQQGIRGVFEPTTIVVESQGMQHYLNMEIAKKTGLS 60 Query: 58 ANIDFPLPASFIWDMFVRVLPE-IPKESAFNKQSMSWKLMTLL--PQLLEREDFTLLRHY 114 NIDFPL + I+ + +L + +P++S F ++ + W + T+L P + Y Sbjct: 61 MNIDFPLVSREIYSICRSILGDKVPQDSPFKREYLVWNIFTILQDPGFISDPRAAYANAY 120 Query: 115 LTDDSDKR-KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALV 173 + + + F+L+ + AD+++QYL+YR DWL WE G+L + WQ +W+ LV Sbjct: 121 WQEQPEPLLQCFRLAKQLADVYEQYLIYREDWLTAWEQGNLKGLNDTLEPWQQLIWEQLV 180 Query: 174 EYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKH 233 H A L I L + LP + I ++ L P ++ A+ ++ Sbjct: 181 A------IHPDHPAALRAAAISQLAT---HQAKLPKSITIFAVNTLSPTQIEFFSAVAQY 231 Query: 234 IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ 293 I+++L F NPC YWGD+ L + E + + + Sbjct: 232 IDVYLFFLNPCSQYWGDVVSDKVLLR---------------------ERLSKGIDELKAE 270 Query: 294 DVGNPLLASWGKLGRDYIYLLSDLESSQELD--AFVDVTPD---NLLHNIQSDILELENR 348 D+ +P+LA+ G+ GR L D+ D F+ T D +LL +Q+DI Sbjct: 271 DISHPILANLGQQGRGLFNQLQDINYPDMTDSQLFIAPTADDAPSLLKQVQADI------ 324 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 + + +D+SI H S REV+ LHD LL +L DP L P DI Sbjct: 325 -------ASAHVTPVTLHPEDIDASIQIHSGFSAIREVQTLHDELLRILTADPDLQPHDI 377 Query: 409 IVMVADIDSYSPFIQAVFG-----SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 +VM ++ Y+PF+ ++F + L +I+DR S P + F+ +LSLPDS Sbjct: 378 LVMCPSVEEYAPFVNSIFRPSYKPAQTDSPQLVCSIADRAPLNSEPTVMMFLDMLSLPDS 437 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA--TGQ 521 RF ++ L +P + ++TE+ L W++ S I+WG++ + T Sbjct: 438 RFSVTKIIDYLRIPSVQKNLNLTEDELTLCINWLSMSQIKWGLNQAHKASWLDNEAVTEH 497 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 +TW +GL+R+ LG Q D GL + ++G L L+ +L+ +R L + Sbjct: 498 YTWEWGLSRLALGCLHSEMQEHHDEFAYVDAVEGLNSRILGKLLVLVNRLSTFRAQLNGD 557 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + ++EW + ++M + F + A +IEQ + A Y + L+L+R+ L Sbjct: 558 KSIQEWERLLQEMSQSLFGETSTQLRAQQMIEQTISQFSKQVQTAGYESPIGLALVRESL 617 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ-K 700 + + +FL G V +++PMRS+PFK++C+LG+NDG +PR P DL++Q + Sbjct: 618 SDKFSTPDALNQFLTGQVTFSSMVPMRSVPFKMICILGLNDGAFPRIALPNSIDLIAQSE 677 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 +RGDRSRR++DRYLFLEALISA+ LY+SY G+S +DN PS+++QEL+ Y+ Q Sbjct: 678 KQRGDRSRRNEDRYLFLEALISARDYLYLSYQGQSAKDNQTIEPSLVIQELLHYLDQKFI 737 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP-----GERQSYAREWLPAASQAGK 815 L + +E + + PF P + ++ S+ + WL A Sbjct: 738 LADPQ----NEKPEKFSERIVRRAPLQPFSPTLFASNEHDFEQKGSFDQGWLALAKSGVL 793 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 +P + + + + +P++ + V + + D EPF L+GL Sbjct: 794 PAKTSTITVPDDI--YLDHNDMTALFINPLKLHVNKQYDVVLDEYINVMDDVEPFSLDGL 851 Query: 876 SRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR 935 S+ ++ Q LN D + P G++ + L D + Sbjct: 852 SKDKLLVQALNTASATIDYDNANDMGLDFVK-PLVNTGDVSQWMLKSQQMSLYDGLHRTI 910 Query: 936 QP-----------------GQSMEIDLACNGVQITGWLPQVQPDGLLR-----WRPSLLS 973 Q N + + L R L Sbjct: 911 AESLAQQPVTTARHNQVVKWQFEHFQFHVNA--LFAIDDEYHSHTFLHKVMTKSRLFELK 968 Query: 974 VAQGMQLWLEHLVYCASGGNGESRL------------FLRKDGEWRFP--PLAAEQALHY 1019 ++ M L+ + + +G L + P + EQA Sbjct: 969 LSLLMTHCLKLMCFGTTGDTSIRYLNSRERTTAGQKSVCLEVNTLHIPYDFMTPEQADIV 1028 Query: 1020 LSQLIEGYREGMSAP--LLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEG 1077 L Y + + P + + ++ YD + ++ + + E Sbjct: 1029 LKLFSAQYIQALREPHFIHLDVYQNLESIRRQYDKDVVSNFKQIPHIEYLLDDYGEQRED 1088 Query: 1078 NMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 + + + L+ A+ + + P+ + Sbjct: 1089 KFSSYAWNVNTYCKWLFPHGFSHQDIALTNIDEWYFHPIIQ 1129 >UniRef50_D2PR48 Exodeoxyribonuclease V, gamma subunit n=12 Tax=Actinomycetales RepID=D2PR48_9ACTO Length = 1102 Score = 602 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 297/1179 (25%), Positives = 486/1179 (41%), Gaps = 141/1179 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG------ 55 L ++ + R DVL + ++ L DPF E+++V + G+ +WL L+ + G Sbjct: 3 LYLHRAERTDVLADGLGELLAT-PLADPFAEELVVVPAKGIERWLSQRLAHRLGAAEGSG 61 Query: 56 --IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRH 113 + A + F P S + VL + ++ + +M+W L+ +L + L+ + Sbjct: 62 DGVCAGVRFTSPRS----LVSAVLG-LDQDDPWAADAMAWPLLAVLDESLDDAWCEPVAR 116 Query: 114 YLTDDSDKR-------KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEG----LGEAQ 162 +L + + ++++ A LF Y V RP L W G +G + + Sbjct: 117 HLGQFDSGAEAELRRGRRYAVAARLARLFAAYAVQRPALLVDWGDGRDTDGRGVTIDDDL 176 Query: 163 AWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPV 222 AWQ LW+ LV+ P H + + Q + LP+R+ + G + LP Sbjct: 177 AWQPELWRRLVDRIDAPPPPARHLSTVAQ------LRDRSESLDLPARLSLFGHTRLPLT 230 Query: 223 YLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSEN 282 ++ L AL +H ++HL +P W + Sbjct: 231 EVELLSALAEHRDVHLWLPHPSGELWDRL---------------------------TGRT 263 Query: 283 AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDI 342 AG Q +PLLA+ G+ R+ L+ + + ++LL +Q+D Sbjct: 264 AGDRAADTSHQMAEHPLLATLGRDSRELQLALAAVPAVDR-HLPSPAARESLLGWLQND- 321 Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 + S R D S+ H CH R+V+VL D LL ML+ DPT Sbjct: 322 ------------LRGNKVSAEGRRPAAEDRSVQVHACHGTARQVDVLRDVLLGMLQADPT 369 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADR------YLPYAISDRRARQSHPVLEAFIS 456 L PRDI+VM DI++Y+P I A FG DR L ++DR Q++P+L Sbjct: 370 LEPRDILVMCPDIETYAPLISARFGLGDLDRYGHPAHRLRVQLADRSLTQTNPLLGVASQ 429 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 LL L SR + VL L + + RF T++ L + WV E+G+RW D + L Sbjct: 430 LLDLAGSRATASQVLDLAETEPVRRRFRFTDDDLDTVTAWVREAGVRWAFDRGDRDRFGL 489 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSV-LPYDESSGLIAELVGHLASLLMQLNIWR 575 Q+TWRFGL R+L G M + W LP D+ EL G A + +L Sbjct: 490 ADYPQNTWRFGLDRVLAGVTMSADAHAWIGTTLPLDDVGSTRIELAGRFAEYVDRLRAAT 549 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 L +PL WL RD + A+ + + +++ + A + L Sbjct: 550 DRLDGTQPLATWLDALRDGIERLTRVGADDGWQVGQVHREFAEVAAGAGELAVT-PLRLP 608 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 +R L+ L F +G + +CT++PMRS+P +VVCLLG++DGV+PR G D Sbjct: 609 DVRSLLSAHLAGRPTRANFRSGSLTVCTMVPMRSVPHRVVCLLGLDDGVFPRFGLADGDD 668 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 ++++ P G+R R +DR L L+A+++A + L I+Y G + R P+V + EL+D + Sbjct: 669 VLARCPVTGERDVRSEDRQLMLDAILAATESLVITYTGANEYSGQPRPPAVPLGELLDAL 728 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER-----QSYAREWLPAA 810 + +E+ V+ + H PFD +N + G ++ L AA Sbjct: 729 DR-------------TTESPVRETVVVNHPLQPFDRKNLEAGRLGTPGPFTFDPAALVAA 775 Query: 811 SQAGKAHSEFV----QPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 G + +PL E V L L F+ PV+ FF+ L V E + D Sbjct: 776 RVGGGSRPPRPAFLAEPLTLPGGEDVALADLLAFFRDPVKGFFR-ALDVTLPWEVDGVSD 834 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 P ++ L ++ + ++L ++ + G LP G G + Sbjct: 835 AMPVEIDNLEKWSVGDRMLRDMLAGIHPDAALNAEWRRGTLPPGRLGWRTATDLRDIARG 894 Query: 927 LADRVIACRQ-PGQSMEIDLAC-NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 LA RQ + ++D+ G ++TG +P V L+ S L Q + W++ Sbjct: 895 LAVAAYPHRQGGATAYDVDVDLGGGRRLTGTVPGVHGYRLVSVSYSRLDAKQLLTSWIQL 954 Query: 985 LVYCASGG-NGESRLFLRKDGEWR------FPPLAAEQALHYLSQLIEGYREGMSAPLLV 1037 L A+ + + L + + R F P+ A QA L+ LI Y G PL + Sbjct: 955 LALSANDEDHNWTALAIGRPRSGRTPASRLFGPVGA-QARTLLADLISVYDGGRREPLPL 1013 Query: 1038 LPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQL 1097 ++ AW + DD + A ++ A GE D + R+W Sbjct: 1014 PLKTSFAWCQARRT--------DDEPMIAAGRRWRPA-----NYDGENADPAHVRVWGPN 1060 Query: 1098 TPE---------------TMEAIVEQSQRFLLPLFRFNQ 1121 P + + R P+ RF Q Sbjct: 1061 APLKVLLEPTRPGEQWPGEPTRLGAYAARVWEPMLRFEQ 1099 >UniRef50_D1N1Q2 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N1Q2_9BACT Length = 1095 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 317/1159 (27%), Positives = 503/1159 (43%), Gaps = 119/1159 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 +Y SN+L+ L A+ ++ DPF PE ++VQ+ GMA WL+ +++ I AN D Sbjct: 3 FNLYSSNKLEDLAAIFRRMIFDRPGPDPFVPETVVVQTQGMATWLEQEMARDGSIMANFD 62 Query: 62 FPLPASFIWDMFVRVLPEIPKESA------FNKQSMSWKLMTLLPQLLEREDFTLLRHYL 115 P SFI ++LP E+ F+ + +W++ LL + R + L YL Sbjct: 63 MPFLQSFILKTMRQLLPREELEAFNRECRIFSPEVAAWRIFRLLGESAGR--WPELDRYL 120 Query: 116 TDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEY 175 T RK QL+ + ADLFDQY VYR D L W G WQ L++ + + Sbjct: 121 TGSEPVRKRRQLAGRIADLFDQYQVYRGDLLEAWRRGEE----PGRYVWQQQLYREIAKG 176 Query: 176 THQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIE 235 +++F E + +P R+ + G+ +PP+YL L+ L E Sbjct: 177 FTGPY-------GWFRKFFERVPERDL-WSRVPVRISVFGVGTMPPLYLNFLRHLSAITE 228 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 ++L + NPCR +W D + + +L + DV Sbjct: 229 VNLFYLNPCREFW-DTYEKRFRDRLADKN----------------------SGVFENTDV 265 Query: 296 GNPLLASWGKLGRDYIYL---LSDLESSQELDAFVDVTPD----------NLLHNIQSDI 342 NPLL S G GR + L +L + + F P+ +L IQ DI Sbjct: 266 ENPLLTSLGAQGRSFFAQTLELPELARVRSAELFRSFVPEKSESLAYPGATMLQTIQEDI 325 Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 L + R G ++E ++ D SI H CH+ +RE+EVL D L+ + +E Sbjct: 326 LRMRRRGPDGDDVEVGR---TRKIDYRRDRSIRVHSCHTIRRELEVLKDELIRLFDESNG 382 Query: 403 -LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 + PRD+IVM DI++Y P+I+AVF + Y ISDR RQ + E F+ LL Sbjct: 383 AVQPRDVIVMAPDINAYEPYIRAVFNDETFEGR--YGISDRSLRQESLIAETFLQLLRQA 440 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 RF + ++L+LLD P L +F I + + LR+ V +S IRWG D R G+ Sbjct: 441 SGRFEASEILSLLDTPALRQKFRIADAEMETLRELVGQSAIRWGYDAAARRRFCDFEFGE 500 Query: 522 HTWRFGLTRMLLGYAM--ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 +WR G R+LLG+AM Q LP + G AEL+G S + L Sbjct: 501 FSWRCGFDRLLLGFAMTAPEDQLVNGEYLPCGNAEGSDAELLGRFVSFVSSLAELGERTG 560 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 E W + + ++ FF PD E+ +T + A A + +PL + D Sbjct: 561 NAHSAEAWAQLFHNAVDTFFRPDKESLPEITALRGTIDAFAAAARDGNCDEPLPLEAVTD 620 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 +L+ + + FL G + C+++P+RSIP + V LLG+N+G +PR+ LGF++MS Sbjct: 621 QLSDSFSLVQNNMPFLRGGITFCSMVPLRSIPMQAVALLGLNEGEFPRRDIRLGFNIMSD 680 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 + + GDRSR+ +DRYLFLEAL++A++ L + Y G ER P+V + +LID + S Sbjct: 681 R-RLGDRSRQMEDRYLFLEALLAARRTLMLFYHGSDPLTLEERPPAVPLADLIDVLKASF 739 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE---RQSYAREWLPAASQAGKA 816 H+ F+ + + P + Y+ E+ AA Sbjct: 740 RDFE-----------------VIRHSLQSFNFRYFDPANGAELRCYSPEYFRAARSLHGY 782 Query: 817 HSEFVQPL--------PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTE 868 + +P P LP + L L+R + + F + R+ ++FRT+ D E Sbjct: 783 LAGGAEPESRLPFTLRPEPLPPVLELAELERAFLNHPEYFLRNRVGLSFRTDRCTPEDKE 842 Query: 869 PFILEGLSRYQINQQLLNALV---EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 PF L+GL YQ+ +LL+ + E E +R A G LP G+ G +ET +++ Sbjct: 843 PFTLDGLGSYQVRDRLLDWRLSSDEGPSGELAYRLMLAGGQLPLGSAGRNEFETARRQVA 902 Query: 926 QLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL 985 L A + + NG+ +TG + + S + + Sbjct: 903 ALTPEQYALLTERHAEPFAVETNGITVTGSMFLSPDGTTQLFVHGSGSSPKHLLRLRLRH 962 Query: 986 ----VYCASGGNGESRLFLRKD--GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLP 1039 V A S F KD P + A L +L+E +R+G+S PL + Sbjct: 963 LLLTVRNAGNIPARSLGFFIKDSVEVVELPEFEPDVAEAELGRLLELFRDGLSRPLPLA- 1021 Query: 1040 ESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTP 1099 A+ + A+++ + R L ++ + + R +R Sbjct: 1022 ----AYFSSACSAKDEP--------EAKRRAALAKFDPGPFDFPLDNLEGFHRCFR-PED 1068 Query: 1100 ETMEAIVEQ---SQRFLLP 1115 EA +E + P Sbjct: 1069 FNDEAFLELVFRCADLIYP 1087 >UniRef50_C0ZQ87 Exodeoxyribonuclease V gamma chain n=6 Tax=Corynebacterineae RepID=C0ZQ87_RHOE4 Length = 1093 Score = 595 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 276/1167 (23%), Positives = 465/1167 (39%), Gaps = 120/1167 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG----- 55 ML++Y + R D L + + ++ L DPF E + V + G+ +WL LS + G Sbjct: 1 MLKLYRAERSDTLVSALATLLRT-PLSDPFARETVAVPAKGVERWLNQRLSSQLGTSGPS 59 Query: 56 ----IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLL 111 I+ANI FP PA + + V + ++ + W ++ ++ + L +L Sbjct: 60 AVDGISANIAFPSPARLVAESVAAVSGITADDDPWSPTRLVWTVLDVIDESLGEPWCGVL 119 Query: 112 RHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEG----LGEAQAWQAP 167 +L + + F ++ +LF Y RP L W G L +G L E WQA Sbjct: 120 AKHLEGHREG-RRFASATHVTELFRSYAAQRPQMLIDWAAGRLTDGHGLALSEDFEWQAR 178 Query: 168 LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQAL 227 LW + + G A + L LP R+ + G + LP L Sbjct: 179 LWCIVADKIDVPG-----PAERLGQVSRALVE-DPALVDLPERLSVFGPTRLPVDQRMIL 232 Query: 228 QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF 287 AL + ++H+ +P W +++ R SE+ + Sbjct: 233 SALSANRDVHIWLPHPSPALW-----TKMSSRIPPR----------------SESTIRRS 271 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN 347 NPLL+S + R+ L + + P +LL +++D++ Sbjct: 272 EDGSALISANPLLSSLARDVRELQISLGA-AEFESVHLPEPAGPKSLLATVKADVIADRA 330 Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 +VA D ++ H CH P R+VEVL + LL + E+DPTL PRD Sbjct: 331 PSVA----------------AEPDGTVQVHACHGPARQVEVLRECLLRLFEDDPTLQPRD 374 Query: 408 IIVMVADIDSYSPFIQAVFGSA---PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 ++VM D+++Y+P ++A FG L ++DR RQ++PVL SLL L D R Sbjct: 375 VLVMCPDVETYAPLVRAAFGQGVHGHPGHLLRVRLADRGLRQTNPVLAVLGSLLELADGR 434 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + +VL L + RF E+ L LR+W E+G RWGI L A Q+T+ Sbjct: 435 ATASEVLDLAAADPVRTRFSWGEDELERLREWTTEAGARWGIGSRQRATFGLDAFPQNTF 494 Query: 525 RFGLTRMLLGYAMESAQGEWQSV-LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + R+LLG + + ++ W + LP D+ G +L G A + +L + R LA Sbjct: 495 NTAMDRILLGVSADESENAWLDLALPLDDVDGTDIDLTGRFAEFVDRLAVSLRDLAGPHS 554 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 EWL V L+ ++ A + + L+ +R L++ Sbjct: 555 PAEWLRVLMRALDLLTDTAPADSWQSAGAHRELVA----AVEFGGETMLRLADVRAMLSR 610 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 L F G + +CT++PMRS+P +VV L+G++D V+PR G D++S+ P Sbjct: 611 SLAGRPTRANFRTGELTVCTMVPMRSVPHRVVVLIGLDDEVFPRTGGVDGDDILSRHPVV 670 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 G+R R +DR L L+A++SA + L + Y G R P++ + L+D + + Sbjct: 671 GERDLRSEDRQLLLDAVMSAGEHLILLYTGADPVTGVVRPPAIPLSGLLDVLSATV---- 726 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 + H FD +N+ P + S+ L A A E Sbjct: 727 ---------GPEAINGVLTRHPLQSFDNRNFSPDQPFSFDTAALAGARAAAGTPIELPTV 777 Query: 824 LPFTL----PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 L L P+ V L L F HP R F + RL V D +I D+ L+ LS + Sbjct: 778 LSAELLEVHPKEVNLADLVNFLVHPARGFLRQRLGVRVPELDDDIADSLATELDPLSTWA 837 Query: 880 INQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP-G 938 + ++L + + + G LP G + QLA + + Sbjct: 838 LGDRMLLSRLAGRSSADFRAAEWRRGTLPPYNLGASVLGNVEWVVDQLAGLALPHLEGDS 897 Query: 939 QSMEIDLACN-GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESR 997 +++++D+ G ++TG + V + ++R S L+ M W+ L A G G Sbjct: 898 EAVDVDIDLGDGHRLTGTVTGVHGNSVVRASYSSLAPKHRMTAWINLLALKAHGRPGALD 957 Query: 998 LFLRKDGEWRFPPL-----AAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDA 1052 G + A A L QL++ G+ PL + + + + + Sbjct: 958 AVSIGRGRGKIAAARSVLDAPGNAAEILQQLVDLRERGLQRPLPMWAATSAEYARRRFGG 1017 Query: 1053 QNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ--------LTPETMEA 1104 + ++ A + G GE D ++ + P + + Sbjct: 1018 E---------SVDDATNGADTQWTGQY---GEMIDPSNAYVFGEARTLAELAADPPSDDE 1065 Query: 1105 ---------IVEQSQRFLLPLFRFNQS 1122 ++R PL ++ Sbjct: 1066 FVWAEEPTRFGVLARRLWDPLLTNERA 1092 >UniRef50_A6DNF3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DNF3_9BACT Length = 1099 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 296/1150 (25%), Positives = 535/1150 (46%), Gaps = 114/1150 (9%) Query: 2 LRVYHSNRLDVLEALMEFIVERER------LDDPFEPEMILVQSTGMAQWLQMTLSQKFG 55 +R+ SN+L+VL + + ++ E+ L P +++++QS GMA+W+ M ++ G Sbjct: 1 MRISASNQLEVLVSQLADSLQNEKCRPEELLGRP--NDLVIIQSRGMAKWIDMQIADHNG 58 Query: 56 IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYL 115 IA I++P +FI + V+ PKE ++++S++W++ LLP++ FT++ Y+ Sbjct: 59 IATRIEYPFIRTFISSILVKC-SYSPKEDIWDRESLAWRIFKLLPEI--ESKFTIIHDYV 115 Query: 116 TDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGE-------AQAWQAPL 168 +++ + FQL+ + A L D+Y+VYR DWL W G + +AWQ L Sbjct: 116 K--TNQLRRFQLAEQLASLIDEYMVYRHDWLQSWIQGKAFTQFNQGLEKELKHEAWQIAL 173 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQ 228 W+ L E Q L LP R+ I GI+ +PPV++ + Sbjct: 174 WQKLCESAQNSFQAALQNFLLADDI-------QPEVLELPPRIAIFGITNMPPVFVNFFE 226 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 L + ++ L NPC+ YWGDI+ + A Q + R R EN Sbjct: 227 KLSQLTQVTLYHFNPCQEYWGDIRMERFSA--FPLQGKDDLGLRGPIFSRTFENEIPDLP 284 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR 348 + +G LGRD++ LL + S L+ + LLH IQ+ ILE++ Sbjct: 285 HSLLKSLG--------LLGRDFLNLLIENTSFDTLEHYAPSESSQLLHRIQNGILEMQED 336 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 + D S+ CHSP+RE+E LHD L+ L ++P L P+DI Sbjct: 337 FEDDLV---------------TDDSVKISSCHSPRRELEALHDYLVGSLADNPDLRPQDI 381 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 IVM +I Y+P I+ +F + P + L ++I+D+ + P++ +++ + L SR S Sbjct: 382 IVMAPNIHDYAPHIRNIFSN-PDNMPLDFSITDQE-LRGRPLVNSYLKIFELAKSRLSSN 439 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 D+L + + P +R+ + + + +R W+ ++ IRWG D + ELP Q++W+FG Sbjct: 440 DLLEIFENPDFLSRYKLKVDDVHTIRDWIEQARIRWGKDAQQRADWELPEFEQNSWKFGF 499 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL-AQERPLEEW 587 R+L GYA + + + S+L G ++G + + QL + +E+ L+ W Sbjct: 500 DRLLAGYAFDDPE-LYDSILSCP--IGGDGAILGKIKTAADQLFSIYEIITQEEKSLQNW 556 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 +L + F +A+ + +I Q Q + Q + + + L L++ Sbjct: 557 CEYFSFVLKSNFEENADNQNEYNIILTQLQKMSERADLLQMNEVIAAEIAIKSLNSALEE 616 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + S F++ + C+L+PMRSIP KV+C+LG+N+G PR GFDLM++ ++GDR+ Sbjct: 617 QSSSHGFISRGITFCSLLPMRSIPVKVICMLGLNEGQLPRTNHRSGFDLMNKNWRQGDRT 676 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 DDRYLFLE+L+SA++KLY+SY+G+S +DN E PSV++ E ++YI + Sbjct: 677 MSLDDRYLFLESLVSAREKLYLSYVGQSERDNEEIPPSVILAEFMEYIKKI--------- 727 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPG--ERQSYAREWLPAASQAGKAHSEFVQPL- 824 H F+P+ +Q + S ++ AA K+ + Sbjct: 728 --------APDFQITQHALNAFNPRYFQDEDNDLASLSQLHFRAAQSLLKSREPEREVPA 779 Query: 825 -----PFTLPET---------VPLETLQRFWAHPVRAFFQMRLQVNF-RTEDSEIPDTEP 869 LPE + LE L +F+A+ + F + +L + + + SE+P+TE Sbjct: 780 LFCEQELDLPEEIKSQDGFIDLDLEDLAKFFANSAKTFLRCQLGTSLWKDQVSELPETEA 839 Query: 870 FI-LEGLSRYQINQQLLNALVEQDDAERLF-------RRFRAAGDLPYGAFGEIFWETQC 921 F + L +++I L+ AL+ +D A G LPYG G +E Sbjct: 840 FAQVNALEQFKIKSTLIEALIHKDPDLDEESFKIQMQELVLADGSLPYGLKGIECFEQIY 899 Query: 922 QEMQQLADRVIACRQPGQSMEIDLAC-----NGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 + +++A++++ + + +++ +++ L + LL + P Sbjct: 900 GDSEKVAEQILLHKGEHKEEQLNFTLTFELSEKIRLNCSLSGIYQQNLLTYHPGKDKFKH 959 Query: 977 GMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLL 1036 ++ +++L AS + ++ +D ++ + + A L Q++E Y G+ PL Sbjct: 960 LIKHCIKYLAL-ASVEPRKKLHYINQDKAYQIHEI--KDARQSLEQILELYLSGLKKPLA 1016 Query: 1037 VLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ 1096 LP + + + + + + A K+ AY+ + D +Q + + Sbjct: 1017 FLPNCFQKYYEQRKLKKP---KEHEVAMGLAEQKW--AYDSYNNAFADSVDNSFQVCFGK 1071 Query: 1097 LTPETMEAIV 1106 P + Sbjct: 1072 DFPYEDALLC 1081 >UniRef50_C8XGX0 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XGX0_NAKMY Length = 1141 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 286/1198 (23%), Positives = 466/1198 (38%), Gaps = 141/1198 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG------ 55 L V+ + R D A + E DPF +++ V + G+ +WL L+ + G Sbjct: 3 LHVHRAQRADA-LAAALGDLLAEPPADPFGVDVVAVPTRGVERWLTQRLAHRLGTRDGRS 61 Query: 56 --IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRH 113 I A + FP P + + + L + + + W L+ + + LL Sbjct: 62 DGICAAVRFPSPTTLVDE-----LAGDRADDPWTPDAAVWPLLAAIEASVHEPWCALLAE 116 Query: 114 YLTDDSDKR-------KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVE----GLGEAQ 162 +L D + + ++ + A LFD Y +RP+ +A W G + + Sbjct: 117 HLGYRGDDAQAEHRRGRRYAVARRIAGLFDGYAEHRPEMVAAWSQGGDDDGWGEPVPADL 176 Query: 163 AWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPV 222 +WQ LW+ L + P A + R LP RV + G +ALP Sbjct: 177 SWQPRLWRRLRDRI-DAPDPVATFAQVAARLAA-----DPGAVDLPERVSLFGATALPHR 230 Query: 223 YLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSEN 282 + L AL H ++HL +P W + + R+R Sbjct: 231 QVLLLSALAHHRDVHLWLPHPSPVLWDRVGELRPPVPGRIRRRDDPTAGAAT-------- 282 Query: 283 AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDI 342 +PLLAS G+ R+ +L+ D P LL +Q D+ Sbjct: 283 --------------HPLLASMGRDVRELRTVLAGRIDRDTWHR-ADDPPATLLGRLQRDL 327 Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 + +K +D D S+ H H P R+V+VL D ++ +L +DPT Sbjct: 328 SDNRRPGPGMA---------DKPVVDATDDSVRVHAAHGPGRQVDVLRDVVIGLLADDPT 378 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPA------DRYLPYAISDRRARQSHPVLEAFIS 456 L P DI++M DI++++P +Q FG A + L ++DR RQ++P+L Sbjct: 379 LHPADILIMCPDIEAFAPLLQGAFGLADSVPDGHPAHQLQVRLADRALRQTNPLLATLDR 438 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 LL L SR + DVL + RF ++ L L WV +G RWG+D ++ R L Sbjct: 439 LLDLAGSRVTASDVLDFAAFAPVRHRFGFDDDELSTLADWVAAAGARWGLDAEHRRRYGL 498 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQG-EWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 GQ+TWR L R+LLG M G ++ LP DE +L G LA L+ +L Sbjct: 499 AEYGQNTWRAALDRILLGVCMSDEPGNRLETALPLDEIGSADVDLAGRLAELIDRLATVV 558 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD-AVPL 634 L+ ++ W + + A + + A+ A + L Sbjct: 559 DTLSSRHSVQRWCAELLAGVQSLTSVPARAAWQVAEFRAEVAAVQRHAAAAGSTGLELGL 618 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 + +R LA L F G + +CT+MPMRS+P +V+CLLG++DGV+PR G Sbjct: 619 ADVRALLAGALAGRPTRANFRTGTLTVCTMMPMRSVPHRVICLLGLDDGVFPRGAREDGD 678 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 DL+ ++P G+R R DR L L+A+++A +KL I+Y G + ++R P+V V EL+D Sbjct: 679 DLLIREPACGERDLRSQDRQLMLDAIVAATEKLVITYSGADERTGAQRPPAVPVGELLDA 738 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER-----QSYAREWLPA 809 + + + V+ + H PFD + G ++ L Sbjct: 739 LDDTATT---------ATGGAVRDLVLVRHPLQPFDARTLTAGALGRVGPFTFDPVALGG 789 Query: 810 ASQAGKAHS------EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE 863 A P P P V L + HP + F + RL V E + Sbjct: 790 ARALAGPRRPAGRLVPAPLPAPDRPPADVELAEVIEVLTHPAKGFLRRRLDVAVPFEQDD 849 Query: 864 IPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQE 923 PD P L+ L + + ++L + + + G LP A G E ++ Sbjct: 850 PPDDLPVDLDALQEWGVGDRILRDRLAGVPEQECRQAEWRRGVLPPAALGGRALERVLRD 909 Query: 924 MQQLADRVIACR-QPGQSMEIDLAC-NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW 981 ++ L DR R P ++E+ + +G ++ G + V GL+ S L+ +Q W Sbjct: 910 VRPLVDRTATLRAAPRHTVEVSVPLPDGRRLRGTVGGVHGIGLVTVSYSKLAPRARLQSW 969 Query: 982 LEHLVYCASGGN-GESRLFLRKDGEWR-----FPPLAAEQALHYLSQLIEGYREGMSAPL 1035 L L AS + + + R L E+A L L+ Y EG+ APL Sbjct: 970 LAFLALTASDPALAWTAAAVGRAERGRPQCATLAALPGERARELLIDLVGLYEEGLRAPL 1029 Query: 1036 LVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR 1095 + ++G + KA+ + + G GE D R+W Sbjct: 1030 PLPLKTGEKYADARRRG---------MDHDKAQDQAAATWTGGKY-PGERQDAANMRVWG 1079 Query: 1096 QLTPETM--------------------------------EAIVEQSQRFLLPLFRFNQ 1121 + P ++ + R PL + + Sbjct: 1080 RDAPFSVLTGSGTDPDTGIDTGTDPGIDADTGTDRGTATGRFALLAGRLWRPLQQHEE 1137 >UniRef50_A1V2S0 Exodeoxyribonuclease V, gamma subunit n=90 Tax=cellular organisms RepID=A1V2S0_BURMS Length = 1354 Score = 583 bits (1502), Expect = e-164, Method: Composition-based stats. Identities = 312/1177 (26%), Positives = 500/1177 (42%), Gaps = 122/1177 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVE-RERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML +++SNR + L + + P+ + ++V S + + L++ L+++ G+ AN Sbjct: 241 MLHLFYSNRHETLADALLDDLAFASDGAGPWAAQQVIVPSAALRRRLELDLAKRHGVCAN 300 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLERED-FTLLRHYLTDD 118 + F A ++W VL +P S F + W+ LL + Sbjct: 301 VRFSYLAQWLWAQIGEVL-TVPAHSPFAPDRLVWRCYRLLSDHGAAPWRASPRLAAYLAA 359 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLG-----------EAQAWQAP 167 +D +L+ + A +FD YL YRP+WLAQW+ G + L + +AWQA Sbjct: 360 ADAPMRHELAHRIATVFDHYLTYRPEWLAQWQDGESIFALEGAPRHGGEAARDDEAWQAA 419 Query: 168 LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQAL 227 LW+AL+ G P HR R + + P V + + +PP+++ L Sbjct: 420 LWRALLAELSDSGMPPAHRFLREARAFD-PDVIARARAKWPDAVSVFALPTMPPLHIALL 478 Query: 228 QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF 287 + L + I++ + NPCR +W DI A L Sbjct: 479 RELSRWIDVRIYALNPCREFWFDIVTAARAESLD------------------------AA 514 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDLES---SQELDAFVDVTPDNLLHNIQSDILE 344 + Q+VG+PLLA WG+ + +++L +L + + + D L +Q+ IL+ Sbjct: 515 DRLDYQEVGHPLLAEWGRQTQAQLHMLHELTESAAASDASRYADNPAPTWLARVQNAILD 574 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 L+ A G P + + HVCHS R++EVLHDRLLA + DP+L Sbjct: 575 LQPEAALGE--------------PPAERGVEVHVCHSLARQLEVLHDRLLAWFDADPSLA 620 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAP--ADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 P D++V + D+ + P I AVFG+ +PY I+ Q++PV + L+LP+ Sbjct: 621 PSDVLVAMPDLATAGPLIDAVFGTPAGADAARIPYRITGLPPSQANPVARVLLDWLALPE 680 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT-GQ 521 + +++ L +AAR+ I L ++ W+ SG R G+ D + Sbjct: 681 RDVGAPELVEWLRADAVAARYGIDATALETVQAWLAASGARRGLAPDAAEPPNPAVPAPR 740 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 HT+ LTR+ LGYAM + LP + G AEL+G LA L+ + R +A++ Sbjct: 741 HTFADALTRLFLGYAMPDGAAPVSTWLPIAGAEGGEAELLGRLARFTDDLDGFARRIARD 800 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + W V D L FF A++ + A++A G A+P +++R L Sbjct: 801 LTPQGWGDVFADALARFFDSGPAFADALSGVRDALDAMLAAMAEGAAGAALPAAVVRAGL 860 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 A LD G V +L +R +P+++VCL+GM+DGV P FDLM+ Sbjct: 861 AAALDD-PARGGVPWGGVTFSSLTSLRGLPYRIVCLIGMDDGVLPSLARADEFDLMAVFA 919 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 K GDR RRDD+R LFL+ L++A+++L I+Y GRSI+DN+ P+ LV EL+D++ + Sbjct: 920 KLGDRQRRDDERNLFLDLLLAARERLLIAYTGRSIRDNAPLPPAALVDELLDHLAAASAG 979 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP-GERQSYAREWLPAAS-----QAGK 815 P ++ + H PF + + P G +Y A + Sbjct: 980 PDAPP----DAVDAARRAFVIEHPLQPFSAEYFAPGGALFTYDASRATLARLLAEGARAQ 1035 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 A F PLP + V +RFW HP R+ + RL + +E+ DTEPF L+ Sbjct: 1036 ARPFFAAPLPAEPEQPVAFADFERFWRHPARSLLRARLGIVLLDAQAELVDTEPFELDYA 1095 Query: 876 SRYQINQQLLNALVEQDDAERLFRRFR---AAGDLPYGAFGEIFWETQCQEMQQLADRVI 932 + +++L L+E DA R A+ ++P GA G + + + QLA V Sbjct: 1096 GSDALAERVLPLLIETADAAAFEHALRVADASPEVPGGATGAVRRDHALDALAQLAGNVR 1155 Query: 933 ACRQ-PGQSMEIDLAC--------------------------NGVQITGWLPQVQPDGLL 965 + +++ G L ++ G + Sbjct: 1156 RALADGATRVPFAFDVAPAWSAASDARWFGEHDAALAAAATREPLRLHGALARLTAAGQV 1215 Query: 966 RWRPSLLSVAQGMQLWLEHLVYCASG-GNGESRLFLRKDGEWRFPPLAAEQALHYLSQLI 1024 +R + + WL HLVYCA G L+ + F P+AA L L+ L Sbjct: 1216 IYRYARPGARDYLAAWLAHLVYCAIDPGGPRRTLWFGSGDTFEFAPVAAP--LEQLAPLA 1273 Query: 1025 EGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGE 1084 +R G PL P S A + + KA ++ N V GE Sbjct: 1274 ALFRAGRRMPLAFFPRSAWALVS--------------ESESKAAGVWI-----NDRVAGE 1314 Query: 1085 GDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 DD WR P E + PL + Sbjct: 1315 ADDASLALAWRGANPSLDEPFGALAHLVFDPLVEHLR 1351 >UniRef50_C7PDT3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PDT3_CHIPD Length = 1063 Score = 579 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 294/1139 (25%), Positives = 488/1139 (42%), Gaps = 107/1139 (9%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L + SN L+ L + ++ FE +I+ Q+ GM WL++ L++ GIAAN Sbjct: 3 LYLRVSNSLENLSMGLAQTLKAS-NSQVFEQHLIVTQTEGMNNWLKLQLAEYLGIAANCR 61 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLT--DDS 119 F P I ++ L + + ++++W L LL + + RE + + Y + Sbjct: 62 FLKPNDLIHQIY--FLMDGQYSEMLSGRNLTWLLYKLLGEDIFRETYPAVATYYHTTEPD 119 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 K L+ + ADLFDQY +YRP+ + +W E WQ LW E Sbjct: 120 SDLKRMALAERTADLFDQYQIYRPEMINEW--NAPPEDPFAKIDWQQYLW---TEAKKVS 174 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSR---VFICGISALPPVYLQALQALGKHIEI 236 G + + Q ++ L++ L R V + G+S + ++Q L L I+I Sbjct: 175 GHALPDKTIIGQHILDMLKNPD-HQETLAHRMNTVHLFGLSIITAYHVQILHELSSFIDI 233 Query: 237 HLLFTNPCRY-YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 + NP YW D K A+ + R D Sbjct: 234 YFHIINPSPELYWFDDKSEKQQARWRLKGRPIHESDTA---------------------- 271 Query: 296 GNPLLASWGKLGRDYIYLLSDLE---SSQELDAFVDVTPDNLLHNIQSDILELENRAVAG 352 GNPLL WG++ +D L + ++ E + V+ PD LL+ +Q DI N Sbjct: 272 GNPLLMGWGRVVQDTFGLFFKYDAFINAYESEGLVEPQPDTLLNKVQHDIFLNAN----- 326 Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML-EEDPTLTPRDIIVM 411 + P D D SIT + C++ REVEVL++ L+ ++ ++ TL+PRDI+VM Sbjct: 327 ------EQRHPIFPEDVEDGSITINNCYTVAREVEVLYNYLVHLVDKKRETLSPRDIVVM 380 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 V DID Y+P+I+A+F +AP Y I+D S + A ++L L + F +E+VL Sbjct: 381 VRDIDVYAPYIKAIFNNAPYKFR--YTIADESYADSDNLFNALHAILRLNEDNFKAEEVL 438 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 LLD + RF I + +R V+E+ IR+GI T +W++G+ R+ Sbjct: 439 QLLDSSYVRKRFGINN--VPLIRHVVDEANIRFGIHGAKE-----DETYLVSWKYGIKRI 491 Query: 532 LLGYAMESAQGE---WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 + G M Q + P D G + V L +ER + W+ Sbjct: 492 MYGICMSGDQEYGKGEEGFFPLDILEGSDSLEVIRFCHFAEVLISAIEDRKKERSISGWV 551 Query: 589 PVCRDMLNAF-FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 +L+ + P+ E + + QQ L D V + Q L Sbjct: 552 EYIEGILHNMVYEPEEEIDEDYNTLMQQLSDY--NLLNEYMSDTVAFDVFSHSFLQTLTG 609 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + F+ G + C+L+PMRSIPF+VV +LG++ +PR+ P+GF+LM + +RGDR+ Sbjct: 610 TTRTGLFVNGGITFCSLIPMRSIPFRVVAMLGLDYDKFPRREQPIGFNLMEKNKQRGDRN 669 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 +D+D++LFLE ++SA+Q LYISY+G+S +DNS PS LV EL+DYI Sbjct: 670 VKDNDKHLFLETVLSARQYLYISYVGQSAKDNSRMPPSALVDELLDYIESGC-------- 721 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQ-PGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 E V+ L F + Q SY +P + + + + Sbjct: 722 ---EDAEGVRNRLVTRQPLQGFSRKYGQGDERLYSYLNTAVPE-----RIITRADKAMEQ 773 Query: 827 TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN 886 E + L+ L RF+ +P +A++ L + + E + +TE F L+ L ++ + +LL Sbjct: 774 PSIEEIDLDELVRFFKNPFKAYYNKVLGIYYNDEQVLLNETEIFHLDSLQKWSLKNELLQ 833 Query: 887 ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC--RQPGQSMEID 944 ++ + + R G LP + + E+Q + ++ AC QS++++ Sbjct: 834 --MDTNAIANMKIRLVKTGRLPLKNMAYVALQQIEAEVQPVREKFRACINGAEEQSVQVN 891 Query: 945 LACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLR--K 1002 L G + G + V L++ S M+ ++ +L A+G K Sbjct: 892 LDIEGTLLKGTINGVFDGKLVQVSWSKREDKYLMEAYIRYLAGRAAGVLDGMCFISGASK 951 Query: 1003 DGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDS 1062 + PLA ++AL L+ L++ +REG P+ D D S Sbjct: 952 REAFEAIPLAQQEALRRLTALVKIFREGFEKITPFYPD--------FDIKPADVAGLDFS 1003 Query: 1063 TLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ---LTPETMEAIVEQSQRFLLPLFR 1118 K K L +G+ + D + R + ++ L+PL Sbjct: 1004 KFSKKVDKALD--KGDDITI----DPYISREYENGFFKDETMLDTYKVICSHLLVPLAE 1056 >UniRef50_A9BB00 Possible exodeoxyribonuclease V subunit C 125 kD polypeptide n=1 Tax=Prochlorococcus marinus str. MIT 9211 RepID=A9BB00_PROM4 Length = 1105 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 231/1169 (19%), Positives = 442/1169 (37%), Gaps = 115/1169 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +Y SNR + L ++ + E I+V + +WL +++ GI+A + Sbjct: 1 MLTIYRSNRAEWLANVLAEQLRANPPG-LSENVEIVVNTWPTGRWLGEEIAKINGISALV 59 Query: 61 DFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 FP PA+ + + + L I + + + W ++ LP+LL++E+ +L+ +L D Sbjct: 60 RFPFPAAQLKTLVRKFLGIEVINDDDPWEANQLIWPILNSLPELLQKEEAGVLQKWLERD 119 Query: 119 SDKRKL-----FQLSSKAADLFDQYLVYRPDWLAQW-----ETGHLVEGLGEAQAWQAPL 168 + +QL+ A FD+Y++YRPD ++ W E +L L + WQ L Sbjct: 120 LSQSGKLSRDEWQLAKTIAYTFDEYIMYRPDVISDWWGTENEINNLKSKLPKYIQWQPIL 179 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQ 228 L + Q + L+ LPS + I GI++L PV L+ +Q Sbjct: 180 INLLKQRITQ-----EPFGLQVRNVASKLKKGIAPKQNLPSDLRIFGINSLAPVQLELIQ 234 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 AL +E+ + PC+ W K + ++ N Sbjct: 235 ALSCIMEVKVFLLTPCKDLWSRCKTKRE----------------------EYGEGWKVAN 272 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLS-----DLESSQELDAFVDVTPDNLLHNIQSDIL 343 L A+ G++G ++ LL L E D F L + +L Sbjct: 273 DKLWLLNKQRLEATLGRMGSEFEQLLEGSGEYQLGEWDEKDLFAMPATIALNKQRKPTLL 332 Query: 344 E-LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 E ++ R V IE RS DSSI+F C P+R+++++ D++L L + Sbjct: 333 EQIQQRLVTNECIEPLQRSL-------DDSSISFTECPGPKRQIQIVRDQILQQLALNKN 385 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPAD-RYLPYAISDRRARQSHPVLEAFISLLSLP 461 L P+DI++M ++ ++ I ++F A LP+ I+DR + + I L+ + Sbjct: 386 LEPKDILIMTPQVEKFAHLIPSIFNDVSATGVTLPWKITDRSQYDQPGLTQCIILLMEIA 445 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 +R + ++ LL PV+ + + + + + + E+G RWGI+ Sbjct: 446 CTRLTASNLDQLLTNPVIKDLYKLDDSEIDKITNCLQETGFRWGINSLER-----DGEET 500 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQS-VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 HT + L R L+G + + G + P+ G+ + +L ++ +GL Q Sbjct: 501 HTLNWCLERWLVGMVIPTIPGLVLGGIAPFS--KGISISELSKWWEILSKICNMLQGLRQ 558 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 +W V + + + D + + I + + + ++ + Sbjct: 559 SHSCMKWGLVLKGLCDDLCNNDRKWSWERQRFLRAIDDWIRAAD--CFKKEIKIEVVAEI 616 Query: 641 LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 + + +E G + I L PMR+IP K++ L+G+++ ++PR+ GF L+ K Sbjct: 617 VKDLIAKEAGRFGHRTGRITISALEPMRAIPHKMIVLMGLDETIFPRKQQRPGFSLLDHK 676 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 GD D DRY+ LEALIS ++ L I++ GR + PS VQ+ +Y+ Sbjct: 677 HFLGDPRINDKDRYVLLEALISTRETLLITWDGRDEKTGDSLEPSSPVQQFFEYLQHELG 736 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF 820 L S + + P +R R+W+ A + Sbjct: 737 EKSSMGLLKKPSPNPLNKNNFLSCNNQP----PISCDKRDLETRQWMNAKQGSRGLTLAL 792 Query: 821 VQPLPFTLPETVPLET---LQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR 877 + L+ + A P + + ++ R + I D + + L + Sbjct: 793 PLNWNLSKNAVNSSSDNELLKSWLATPQLKWLEQ-FHLHPREWNKPIEDLDSLSIPELIK 851 Query: 878 YQIN------------QQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 ++I Q+++ + + ++ ++ G P + + E + Sbjct: 852 FKILKQEFTELITSSNNQIISPEINERESPNWQDKYLGQGVFPPKSAATLESEILGRRWT 911 Query: 926 QLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL 985 L + + + ++ G + + + + L + WL HL Sbjct: 912 SLIKSLSKLGEVKRDSLMEDNETGEIL------IANNCTVLVEIGRLKAKTILNTWLTHL 965 Query: 986 VYCASGGNGESRLFLRKDGE----------WRFPPLAAEQALHYLSQLIEGYREGMSAPL 1035 A + + + + + + P+++ +A L +L + G+ Sbjct: 966 KLSAYHKSTKKTVVIARSDSNTKIDSYEVMLSWHPMSSIKAESILDELKQQAHNGLKQCW 1025 Query: 1036 LVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR 1095 V PESG K Y ND F +A+ G+ GE + Q + Sbjct: 1026 PVPPESGWKLAKARYKKSNDCNEI-----------FRRAWIGDFNKEGERNKPEMQLCFG 1074 Query: 1096 QLTPETM----EAIVEQSQRFLLPLFRFN 1120 + E + + PL Sbjct: 1075 YKAAPEIFLENELFDQCLELLYKPLIAQL 1103 >UniRef50_C1ACJ2 Exodeoxyribonuclease V gamma subunit n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ACJ2_GEMAT Length = 1101 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 302/1159 (26%), Positives = 496/1159 (42%), Gaps = 125/1159 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L+V + L A ++ + L PF+ ++++VQS GM +W++ L+++ G AA++ Sbjct: 6 LQVVTGDSPHALLAELDRTLTTWPLS-PFDDDIVVVQSLGMERWVRQQLARRRGCAASLQ 64 Query: 62 FPLPASFIWDMFVRVLPE---------IPKESAFNKQSMSWKLMTLL--PQLLEREDFTL 110 P PA+F + + + F +++++W+L LL +L + Sbjct: 65 LPFPAAFCRKLAESLAGIGGPGNETDAPTLDKRFEEEALTWRLFALLSDEDMLADAVYAP 124 Query: 111 LRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGH--------LVEGLGEAQ 162 LR +L +D K + L+ + + FD+Y +YRPD L WE G Sbjct: 125 LRAFLEQ-ADPAKRYGLARRVSARFDEYRLYRPDMLLAWEAGGHASVEGPFDTAAENPHA 183 Query: 163 AWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPV 222 AWQ LW+ +++ G+ H A + IE LE A P GLP R+ + GIS LPP+ Sbjct: 184 AWQCALWQQVLQ-----GERPMHFARWFLHTIERLEQAAIRPVGLPDRLSVFGISTLPPL 238 Query: 223 YLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSEN 282 +++ L+A+ + + P Sbjct: 239 FVRLLKAVSRFAAVRFFVLVP--------------------------------------- 259 Query: 283 AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDA-FVDVTPDNLLHNIQSD 341 + NPL A +G ++ + LL E D++LH++Q Sbjct: 260 ----ADPQLVGRSPNPLTAQFGHASQELLTLLGANEPGGSRHVQAAMPAEDSVLHHLQRA 315 Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 + + + P D S++ H+CHSP RE+EVL D+LL +P Sbjct: 316 -------------LRGSELTPTACLVSPTDRSVSVHICHSPLREMEVLRDQLLDAFAVNP 362 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY--LPYAISDRRARQSHPVLEAFISLLS 459 L P D++VMV D++ Y+P + VFG A ++ +P+ ++DR + L+A LL Sbjct: 363 ALRPHDVLVMVPDVELYAPLAEVVFGGAMSESRPRIPFRVADRALARESAPLQALELLLQ 422 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV-RELELPA 518 L SR DVL LL VP + R +T + L WV ++GIRWG D D+ +P+ Sbjct: 423 LVSSRLGVSDVLHLLSVPSVRRRVGVTPAQVEQLTGWVQQAGIRWGWDADDRVSRFGVPS 482 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 +++WR GL R++ GYAM + +P AEL+G + L L Sbjct: 483 FVENSWRLGLDRLMAGYAMGPVDVLVEGHVPVAGDLVGDAELLGVFVRWVDDLERHLMRL 542 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAA-MTLIEQQWQAIIA----------EGLGAQ 627 + RPL W V ++ +P+ E A M I + QA+ Sbjct: 543 REARPLSTWSTVLAEVFAWAVVPEGSAEQATMAQIAEAMQALREPSGAPRQRRLREAHDV 602 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 V ++RD + LD + + FL G + IC + PMR+IP +V+ +LG++D YPR Sbjct: 603 EDPEVAFEVVRDWILAALDSDDHATGFLTGGLTICAMKPMRAIPHRVIAMLGLDDRSYPR 662 Query: 688 QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 + FDL+ + GDR R DDR L L+ L+ A+ +L++SY+GRS +N+E PS++ Sbjct: 663 RERRPAFDLIGSARRVGDRDPRTDDRQLVLDTLLCAEDRLHLSYVGRSETNNAEIAPSIV 722 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP----GERQSYA 803 V EL+ Y+ + + L H PF + P S+ Sbjct: 723 VAELLQYLQRMVHTVDKAPHPL----------LRVEHRLQPFSTAYFVPTATDTALFSFD 772 Query: 804 REWLPAASQAGKAHSEFVQPLPFTLPET----VPLETLQRFWAHPVRAFFQMRLQVNFRT 859 + + P + L+ L W++P + + L ++ R Sbjct: 773 DVLAASVRDVTERRKAPPFVARAVTPLHTEGVIALDDLMLAWSNPSQLHAERTLHLSLRD 832 Query: 860 EDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET 919 + D EP +++ L R ++ Q+LLN ++ R A+G+LP G G + + Sbjct: 833 HRDALDDVEPTVVDALLRTRLQQRLLNEVLHGAGERGATARLSASGELPPGPLGAAWQQR 892 Query: 920 QCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ 979 Q++ L RV R + + +DL +G Q+ G L + R R + L ++ Sbjct: 893 LAQQVDPLLQRVGQPRF-LEPLTVDLRGHGWQLVGRLDYQHAEEQWRVRAATLKPRDVVR 951 Query: 980 LWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLP 1039 W+ HL A G G + + D E RF P A+ L L++GY+ ++ P+ Sbjct: 952 GWIAHLARQAMG-VGGTTRVMALDQELRFAP--QADAMVLLEALVQGYQRMLAEPMPYFL 1008 Query: 1040 ESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTP 1099 + A+ K A L+ AR KF G G+ DD + LWR+ P Sbjct: 1009 AAAVAYRKAIATAS-SGRGAAKPPLEAARAKFAP---GGDYGEGDLDDPYVALLWRERDP 1064 Query: 1100 E--TMEAIVEQSQRFLLPL 1116 +A V F PL Sbjct: 1065 FAHHADAFVALVDAFWEPL 1083 >UniRef50_P96921 Exodeoxyribonuclease V gamma chain n=23 Tax=Mycobacterium RepID=EX5C_MYCTU Length = 1097 Score = 571 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 291/1176 (24%), Positives = 482/1176 (40%), Gaps = 137/1176 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLS--------QK 53 L ++ + R D+ A + + DPF E++LV + G+ +WL LS + Sbjct: 3 LHLHRAERTDL-LADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGRA 61 Query: 54 FGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRH 113 G+ A I F P S I ++ + + ++ ++++W L+ ++ L+ L Sbjct: 62 DGVCAGIAFRNPQSLIAEITGTL-----DDDPWSPEALAWPLLAVIDASLDEPWCRTLAS 116 Query: 114 YLTDDSDKR--------KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQ 165 +L + + + ++ + A LF Y RP LA W G + L AWQ Sbjct: 117 HLGHFATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDG-DLGELPGDLAWQ 175 Query: 166 APLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQ 225 PLW+ALV H + I L P LP+R+ + G + L +Q Sbjct: 176 PPLWRALVTTVGADPPHVRH-----DKTIARLRDG---PADLPARLSLFGHTRLACTDVQ 227 Query: 226 ALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQ 285 L AL H ++HL +P W R L F+ ++ Sbjct: 228 LLDALAVHHDLHLWLPHPSDELW-----------------------RALAGFQGADGLLP 264 Query: 286 LFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL 345 + +PLL + G+ R+ L ++ E PD LL +Q+DI Sbjct: 265 RRQDTSRRAAQHPLLETLGRDVRELQRALPAARATDEF-LGATTKPDTLLGWLQADIAGN 323 Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 R R L D S+ H CH P R+++VL + LL +LE+DPTL P Sbjct: 324 APR-------------PAGRSLSDADRSVQVHACHGPARQIDVLREVLLGLLEDDPTLQP 370 Query: 406 RDIIVMVADIDSYSPFIQAVFG------SAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 RDI+VM DID+Y+P I A FG L ++DR Q++P+L LL+ Sbjct: 371 RDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNPLLSVAAELLT 430 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + ++R + +L L + A+F ++ L + WV ES IRWG D + R L Sbjct: 431 IAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPTHRRRYGLDTV 490 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQS-VLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 +TWRFGL R+L G AM W LP D+ EL G LA + +L+ GL Sbjct: 491 VHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFVERLHHVVGGL 550 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 + RPL WL ++ + + A +++++ ++A G++ + L +R Sbjct: 551 SGARPLVAWLDALATGIDLLTACNDGWQRA--QVQREFADVLARA-GSRAAPLLRLPDVR 607 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 L +L F G + +CT++PMRS+P +VVCL+G++DGV+PR P G D+++ Sbjct: 608 ALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHPDGDDVLA 667 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 ++P G+R R +DR L L+A+ +A Q L I+Y G + R P+V + EL+D + Q Sbjct: 668 REPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAELLDALDQ- 726 Query: 759 HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER-----QSYAREWLPAASQA 813 + A V+ + H PFD +N PG ++ L AA A Sbjct: 727 ------------TTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAA 774 Query: 814 GK----AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 + LP V L L F+ PV+ FF+ L + + D+ P Sbjct: 775 AGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFR-ALDYTLPWDVDTVEDSIP 833 Query: 870 FILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 ++ L+ + + +++L ++ + G LP G G + + LA Sbjct: 834 VQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAA 893 Query: 930 RVIACR---QPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV 986 +A R +++DL +G +++G + V + S L+ + W+ + Sbjct: 894 AALAHRDGHGQAHDVDVDL-GDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVT 952 Query: 987 YCASG-GNGESRLFLRKDGEWRFPP----LAAEQALHYLSQLIEGYREGMSAPLLVLPES 1041 A G S L + + + + L +L+ Y G PL + ++ Sbjct: 953 LAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKT 1012 Query: 1042 GGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPE- 1100 AW + D Q+ + ++ N G+ D + R W P Sbjct: 1013 SCAWAQARRDGQDPYPP------------ARECWQTNRFRPGDDDAPAHVRAWGPRAPFE 1060 Query: 1101 --------------TMEAIVEQSQRFLLPLFRFNQS 1122 + + R LPL S Sbjct: 1061 VLLGKPRAGEEVAGEETRLGALAARLWLPLLAAEGS 1096 >UniRef50_C6NU56 Exodeoxyribonuclease V gamma chain n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NU56_9GAMM Length = 1146 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 322/1164 (27%), Positives = 486/1164 (41%), Gaps = 108/1164 (9%) Query: 4 VYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFP 63 V H +RL+ L + + L P + LVQS + +WLQ L++ GI A I Sbjct: 11 VLHGDRLEDLLTAIRQWLGANPLP-PLVEDTFLVQSNAVGEWLQWQLAEGDGICAGIRVS 69 Query: 64 LPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQLLER--EDFTLLRHYLT--D 117 LPA F+W+ + RVL +P ++ ++K ++ W+L+ LLP+L L YL D Sbjct: 70 LPARFLWESYRRVLGPRGVPDDTVWSKAALRWRLLRLLPRLAHEADPGGVPLLRYLATTD 129 Query: 118 DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGH--------LVEGLGEAQAWQAPLW 169 S + ++L+ ADL DQY VYR DWL W G ++ L + Q WQA LW Sbjct: 130 SSALERRWRLAGLLADLLDQYQVYRADWLKDWAAGRWTLRDGRGVLRDLPQDQRWQAQLW 189 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 L + G R +++ F++ L A LP R+ G +LP L+AL A Sbjct: 190 HWLCREVTEGGSHFAGRGEIHEAFLQRLREAAPGSLDLPPRLIFFGAVSLPAQSLEALAA 249 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 LG+H+++ + NP Y+W D+ + Sbjct: 250 LGRHLQVLMAIPNPSAYHWSDV---------------------AGADEDLRRQRRRRVLG 288 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESS---------QELDAFVDVTPDNLLHNIQS 340 E G LLA+WG+ GRD++ LL + S Q +D F + T LL +Q+ Sbjct: 289 TSEAGFGPRLLAAWGRQGRDFMRLLDRFDESVEMGPLWGLQRVDFFTEDTGTTLLRQLQT 348 Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 I +L + R L D S+ H + P RE++VL D LL L Sbjct: 349 RIRDLVDSRE------------PGRTLAENDDSLVLHSSYGPLRELQVLQDELLLRLGRG 396 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAP--ADRYLPYAISDRRARQSHPVLEAFISLL 458 L PRDI+VMV DI SY+P +QAVFG RY+P+ I D ++ ++ A + LL Sbjct: 397 RGLRPRDIVVMVPDIASYAPLVQAVFGVYGKNDPRYIPFHIVDLTPQERSNLIRALVWLL 456 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 LP R ++ LLD L RF + E L + W+ + G RWG+ + +L A Sbjct: 457 GLPQGRVTQSEIRDLLDCSALQRRFGLAPEDLPQIHAWLEQGGWRWGLSAAHRADLGFAA 516 Query: 519 TGQ-HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 G + F L +LLGY + + + E L A L+G L L +L WR+ Sbjct: 517 CGAPTSGAFALQSLLLGY-TNGSDSHFDGIEACAEVGSLDAALLGKLWVLWERLESWRQR 575 Query: 578 LAQERPLEEWLPVCRDMLNAFF-LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 L + E W+ R +L FF D A+ +E + + + A + +PL + Sbjct: 576 LKEATTPEHWVERARQLLADFFVASDTADREALEQLESALEDWLLQTEKAAWDGPLPLEI 635 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 R+ L+ FL G V CTLMPMRSIPF++VCLLGMND YPR FDL Sbjct: 636 FREAWLDGLESAGDGA-FLGGGVTFCTLMPMRSIPFRMVCLLGMNDEDYPRPDPRRDFDL 694 Query: 697 M--SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 M + GDRSRR+DDRYL LEAL+SA+ LY+S+ GR ++ R PS L+ +L Sbjct: 695 MTLPDMARPGDRSRREDDRYLMLEALLSARDGLYLSWTGRDPRNQENRAPSALILQLQRE 754 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG 814 I L PF P+ +P +S+AREW P ++ Sbjct: 755 IVGIW-------------GEDALRTRLHLDPLQPFSPRYLEPDGPESFAREWFPVSTVED 801 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 ++ + P + L L+ + + +F+ +RL V D D E F L+G Sbjct: 802 RSVAVLSPPAARL---ELALLDLKGALSDALASFYALRLGVESPWRDRMAADDEAFRLDG 858 Query: 875 LSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI-- 932 L ++QI QQL + G LP A G + + M+ L Sbjct: 859 LGQWQILQQLWERAASPAELREGLAAEARRGHLPLAAAGILQQQRLLTLMESLLGSWQAV 918 Query: 933 --ACRQPGQSMEIDLACNGVQITGWLP------------QVQPDGLLRWRPSLLSVAQGM 978 A + +E + +G ++ LP ++ W + + Sbjct: 919 AEALGPEHEVLEDEFLGDGFRLQARLPKDRSWNANPLGIHLRRHTSKLWHGGKARADRLL 978 Query: 979 QLWLEHLVYCA-SGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLV 1037 WLE V LFL +DG P A L++L+ E + P + Sbjct: 979 LWWLELTVLQTKRREGAVLGLFLGQDGWLCAPA--PVAADESLAELLAWLGEALREPHPL 1036 Query: 1038 LPESGGAWLKTCYDAQNDAMLDDDSTLQK-ARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ 1096 + A L + A + + + + WR Sbjct: 1037 SLDWALALLADADRGDGAGSRRHILGDGRGAAGAWRENWLLQRHFP----NPEAVLEWRS 1092 Query: 1097 LTPETMEAIVEQSQRFLLPLFRFN 1120 + ++ ++R P R+ Sbjct: 1093 SAGLSA---LDLARRIYEPYRRWL 1113 >UniRef50_Q8D2T9 RecC protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D2T9_WIGBR Length = 1083 Score = 565 bits (1455), Expect = e-159, Method: Composition-based stats. Identities = 281/1122 (25%), Positives = 563/1122 (50%), Gaps = 43/1122 (3%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M+ +Y SN++D+++ ++ I++ +++P + E+I+ S+ +++WL++ ++ I AN+ Sbjct: 1 MIYIYQSNQIDLIQKILSKILKNFPINNPMKKEIIITSSSNISEWLKLNITLNINILANV 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +F SFIW + + +P ++ + +SW + Q++ + + + + + + Sbjct: 61 EFISLNSFIWKLVILTTKNVPFDNFAFRLMLSW----YIAQIIPKINKNIKIKNVYKNLN 116 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + ++F LS K ++L+++YL+++PDW+ + L ++Q +Q +W LV+ Sbjct: 117 QFQIFYLSYKLSELYNKYLIFKPDWIDLLNFKKKSKKLEDSQYFQLIIWNLLVKKIK--K 174 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 + + +++Y+ I+ +E + + R+FI GI +P +YL+ L+ L K I+IHL Sbjct: 175 EKDFCISSIYESCIQKIEKSNLIFEDIADRIFIFGIYYIPEIYLKILKTLSKKIDIHLFC 234 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NPC YW DI + Y++ L EN + + + + LL Sbjct: 235 INPCCLYWFDIDNRFYISNL-------------------IENKIKNKKNFFRKKIKISLL 275 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 + WG LG Y+ LL++L + E F DNLLH IQ+DIL + + Sbjct: 276 SFWGCLGAKYLKLLNNLNENIENKIFYKPKKDNLLHTIQNDILYNKYYNIIISKKFNKFE 335 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 N R L+ D+SIT H C + E+ L++ ++ + +++ + +DI+VM ++I+ YS Sbjct: 336 KKNLRVLNSKDNSITIHTCKNKYEEINSLYNFIVKITKDNKKICFKDILVMASNIEDYSS 395 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +I ++F + + + Y ISD + + ++ A ++L LP +F E + LL+ ++ Sbjct: 396 YINSIFNN--INYKINYFISDIKIYERFNIISAIFNILKLPKFKFSIEQIFYLLEFSSIS 453 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 +F + E+ ++ L+ V G++WGI + ++ +++W + + + Y Sbjct: 454 NKFKMKEDEIKMLKYLVINLGVQWGISNKRFKKCNANFEEKYSWNNIIKKTVSEYYTRIN 513 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + + ++ + L + + +LN W L+Q L EW V + ++ FF Sbjct: 514 NKVYFKYIYSNDLDEKKINSLIKLENFISKLNYWYDYLSQPHLLYEWNDVIKKIIKNFFD 573 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 PD + + L+++ W II +G+ +Y + + L + L +R +E ++ ++ Sbjct: 574 PDKKENYVLDLLKKNWNDIIFQGINTKYKKTIYIETLENILYKRFKKENFFKKNKFNSIH 633 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 C L + IP K++CLLG+NDG YPRQ FD + + K D++ R +D Y FL L Sbjct: 634 FCNLKLSKIIPSKIICLLGINDGTYPRQDINYNFDSIYKNLKNDDKNIRQEDLYSFLIIL 693 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 +S+++ LYIS+I I + ++ S+++ ELI+YI S Y+ ++ N E+ +K L Sbjct: 694 LSSKEHLYISFIKNYINEERSKYISIIINELIEYISVSFYIKNCKSYNFLENINNIKKIL 753 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 + F ++ + + + +++ F + + + F Sbjct: 754 FKKYNNFYF----FRKEKIEIFNKKYFLNNININSDKKIFSK---------ISINEFFLF 800 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR 900 +++P++ + + +L++NF E D E + + Y+IN L L++ + Sbjct: 801 YSNPIKFWCKKKLKINFSKE-HLYKDNEFILKNKFNSYRINIILFEYLIKNKYLNKKDLL 859 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ-PGQSMEIDLACNGVQITGWLPQV 959 G F EI E + ++ +L + + ++ ++ + I GWLP + Sbjct: 860 KNTIKYFFDGVFEEIIIEKKYYQIIKLINNINKHLLMKKETKKVFFKLDRTIIFGWLPNL 919 Query: 960 QPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHY 1019 Q GLLRW P LS+ G W+EHL+YC GG G+S +FL + W F + ++A H+ Sbjct: 920 QNSGLLRWNPKNLSLQDGFLFWIEHLIYCIIGGKGDS-IFLGIESYWHFKNINYKKAKHF 978 Query: 1020 LSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNM 1079 +L+ GY G+ P+ +L +SGGAW+ ++ + + ++ D+ T + AR+K + A++GN Sbjct: 979 FKKLLVGYELGIENPIFLLNKSGGAWINHSFNKEKNKLILDEKTKKNARSKLISAWQGNK 1038 Query: 1080 MVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 + G+ D + ++ LT + I+ +S+++ + +FN+ Sbjct: 1039 FINGDSQDFYISKVIPFLTENNINKIINESKKYFIFPLKFNK 1080 >UniRef50_D2U882 Probable exodeoxyribonuclease v, gamma chain protein n=1 Tax=Xanthomonas albilineans RepID=D2U882_XANAL Length = 1187 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 319/1169 (27%), Positives = 498/1169 (42%), Gaps = 124/1169 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPF-EPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 R+Y SN LD L AL+ + R + P PE++L+ M +WLQ TL+ G+AAN+ Sbjct: 60 FRLYPSNALDTLAALLAEELRRPLPEQPLLAPEVVLIPQVAMRRWLQSTLAATHGVAANL 119 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLP-QLLEREDFTLLRHYLTDDS 119 F P F+ R L + + S+ W+L L L L YL DD Sbjct: 120 QFLTPGEFVAHALERNLG--AADDDLDMTSLHWRLYAALRSDLGADPTLAPLAAYLADD- 176 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 D K + L+ + ++F++Y +R DWL +WE G + + QA LW+ + Sbjct: 177 DPLKPWTLAGELGNVFEKYQAWRRDWLLRWEAGADPDDV------QARLWRRIA------ 224 Query: 180 GQPRWHRANLYQRFIETLESAT-TCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 R +RA +++ P GLP R+F + + P L+ L + +H Sbjct: 225 -SGRAYRARRIGHYLDRYARPDGPLPQGLPPRLFAFAVLNISPDVLRVLATQARVGTLHF 283 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 P + YWGD++ + AG + EQ NP Sbjct: 284 YLPTPTQGYWGDLQTLWQRRR-----------------------AGTAVDLFAEQIQENP 320 Query: 299 LLASWGKLGRDYIYLLSDLESSQ---ELDAFVDVTP------------DNLLHNIQSDIL 343 LL +WG GRD++ L+ D E E+ + D D+LL +QSD+ Sbjct: 321 LLQAWGAAGRDFMALIGDYEVVHPLAEIAVYADPLESGQRPLADGGLGDSLLRRMQSDLF 380 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE---D 400 + +D D S+ H CH+ RE++VLHD+L A+L++ D Sbjct: 381 QRRAPRSPAAL----------PTVDKHDPSLQVHACHTRLRELQVLHDQLRALLDDPRLD 430 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 P L PR+I V+ +ID Y P++ AVFGS D LPYA++D S P+ E F++LL L Sbjct: 431 PPLQPREIAVLSPNIDPYVPYLDAVFGSHGNDDALPYALADASPLASEPLAEVFLALLGL 490 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 P +RF ++L L+ +A + GL LR W++ +G RWG+D + R+ + PA Sbjct: 491 PIARFGLHEILDLIASAPIAEAAGLDTAGLDRLRGWLHAAGARWGLDAAHRRQHQAPADD 550 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 +TWRF L R+LLG+A + V P+ + G + L LL L+ + LA+ Sbjct: 551 AYTWRFALDRLLLGHASGAEDDI-DGVAPWPQLEGSALAALDTLLRLLRVLDRHQAALAE 609 Query: 581 ERPLEEWLPVCRDMLNAFF---LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 P +W +L+A + A+ + + A+Y AVP ++ Sbjct: 610 PMPPAQWRECLLALLDALLPQTPSAPRAQRALERLRTLIDQFARDAARAEYTAAVPAEVV 669 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD-- 695 R L + L G ++ ++PMR +PF+ +CLLGMNDG +PR+ G + Sbjct: 670 RAHFTAVLGESDTRAPLLTGGISFGRMVPMRLLPFRAICLLGMNDGDFPRRDPAAGLNRL 729 Query: 696 ---LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 L + + + GDRS R+DDR+LFL+ SAQ Y+SY+G +D S R PS LV EL+ Sbjct: 730 TAELGTARRRHGDRSTREDDRFLFLQLFASAQDVFYLSYLGADARDGSVREPSPLVGELL 789 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP-------FDPQNYQPGERQSYARE 805 Q H P L H P R SY R+ Sbjct: 790 ACAAQYHAEPAAATT------------LVVRHPLQPFAAAAFGAIGAEAADPRRFSYRRQ 837 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPE--------TVPLETLQRFWAHPVRAFFQMRLQVNF 857 W PA +P TLP ++ ++ L+RF P F + RL + Sbjct: 838 WRPAVDSLIGQRQPLPPWIPETLPAMADDALPTSLSIDELRRFLLDPAEQFLRQRLGLRL 897 Query: 858 RTEDSEIPDTEPFI--LEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEI 915 D EP + GL +Y + QQ+ AL+ ++ + L+ R RA LP G G Sbjct: 898 PDPAQADSDLEPLVAPTRGLDKYGLQQQVFEALLREE-TDGLYERLRARALLPSGPLGRH 956 Query: 916 FWETQCQEMQQLAD---RVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLL 972 + ++++ AD + + + +G ++ G L G+ R + L Sbjct: 957 QLDQHLRQLRPYADAFGHWCGATPAPPAARLHVHIDGTELHGRLSDWYAAGVGRVKIGAL 1016 Query: 973 SVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAE-----QALHYLSQLIEGY 1027 S ++ LE L+ A+G F + PL E QA L+ L+ Y Sbjct: 1017 SGRSAIRHGLEWLLLRAAGEGAPFVRFFEHEDGLGPHPLDPERLSSTQAQQALTDLLRLY 1076 Query: 1028 REGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDD 1087 R+G PL +P S A+ + D + + + +A + +A + + G D Sbjct: 1077 RQGQQTPLAFVPYSSWAYYQAARGGDLDKAIKNAAAQWQAGFSWREADRPQLRLVCRGRD 1136 Query: 1088 IWYQRLWRQLTPETMEAIVEQSQRFLLPL 1116 + P+ A SQ L Sbjct: 1137 PF-------ADPQRFAAFASTSQHIFGLL 1158 >UniRef50_Q7VBK2 Exonuclease V gamma subunit n=1 Tax=Prochlorococcus marinus RepID=Q7VBK2_PROMA Length = 1103 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 228/1163 (19%), Positives = 443/1163 (38%), Gaps = 112/1163 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML VY SNR + L ++ + + PF+ I+V + ++WL ++ GI+A I Sbjct: 1 MLTVYRSNRAEWLAEVLAAQLRLNKPK-PFQSVEIMVNTWPTSRWLSEQIATFNGISALI 59 Query: 61 DFPLPASFIWDMFVRVLP-EIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 +FP P S + L E+ + +N ++W+++ +LP+LL+ E+ L ++ S Sbjct: 60 EFPFPNSHLRKFVQLFLGLEVTSKDPWNTNQLTWEIIDVLPKLLKEEESKHLHEWIQKGS 119 Query: 120 D-----KRKLFQLSSKAADLFDQYLVYRPDWLAQW-----ETGHLVEGLGEAQAWQAPLW 169 + ++++ L+ A+ ++Y++YRPD +AQW + + L WQ L Sbjct: 120 NNNKELDKRIWTLAKSIANTINEYILYRPDVIAQWWNLDSKPTKSLRDLPPHIKWQPLLL 179 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 + L + L+ LP + I G+S+L P+ ++ +QA Sbjct: 180 RLLKTKIKS-----EPICLQINEVVTRLKRKEHSSKELPRDLLIFGVSSLAPIQIELIQA 234 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L + + + P + W K Sbjct: 235 LSSVVNVQIFLLTPGQDLWKRCKSRRE-----------------------ELGNDWKVPM 271 Query: 290 DGEQDVGNPLL-ASWGKLGRDYIYLLS-----DLESSQELDAFVDVTPDNLLHNIQSDIL 343 DG + P + AS G++G ++ LL L QE D F ++ + L Sbjct: 272 DGMWMLKTPRIEASLGRMGSEFQQLLEGSGEYQLGEWQEKDLFSMPVKIATYNSKEPTFL 331 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 E ++ +K D+S+ F +R+V+++ D+++ L D TL Sbjct: 332 EQLQESLVVNKASIQLHRKHK------DNSLIFLESPGQRRQVQLIRDQIIQWLATDDTL 385 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAP-ADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 PRDII+M + +P I +VF + LP+ I+DR + +++ + + + Sbjct: 386 QPRDIIIMTPQVKRLAPLISSVFNDISATNVNLPWKITDRSQIEKPGLIQFILEFIDIAS 445 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 SR + ++ LL P L +F + ++ + + + E+G RWGID+ + H Sbjct: 446 SRLTALNLDRLLTNPALQNQFKLDQDEVDRITYCLYETGFRWGIDEKDRN-----GNSTH 500 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 + + L R LLG + + + + S+ + E + +LL L + L R Sbjct: 501 SLEWCLERWLLGIVLPNEPNFVEGDIAPFSSTFTVNE-ITKWWNLLSLLCKHLKALRNSR 559 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 +W+ + ++ ++ L + + + ++++ L Sbjct: 560 KSNQWVFQLKSIVTDLLENESNRTWEGELFNITIENWSQDSNDCILN--IQPLVIKEILT 617 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 + E +G + I L PMR+IP +V+ L+G+++ V+PR F+L+ QK Sbjct: 618 ELFSLENGRFGHRSGKITISALEPMRAIPHRVIVLMGLDELVFPRSEERPSFNLLEQKRL 677 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 GD + D DRY+ LEA++S +Q L I++ R + + + + IDY+ Sbjct: 678 LGDPNNCDKDRYVLLEAIMSCRQHLLITWNSRDEKTGEKLEAPAPINQCIDYLKNELSES 737 Query: 763 GDEALNCDESEARV-KAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH--SE 819 L + + + P R AR +L ++ + Sbjct: 738 DQLGLVQSPPPNPLSNENFIATEYQQPISC-----DRRNLEARIFLDNFTKPKQTALGIP 792 Query: 820 FVQPLPFTLPETVPLETL-QRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRY 878 F + + E++ + + + P + + LQ+ R + I + F L L RY Sbjct: 793 FRWEINYKFKESILTNDIVKSWLRAPQITWLEH-LQLRSREKKISIETIDTFNLNELQRY 851 Query: 879 QINQQLL--NALVEQDD--------AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLA 928 Q+ + L +E D+ A+ ++ R G LP + E+ E + L+ Sbjct: 852 QLLNEELFTQNNLESDNNVLPILLGADDWQKKLRGQGILPPKSAAELECEILEARIASLS 911 Query: 929 DRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYC 988 + + + + + + + +L L A M WL+HL C Sbjct: 912 SLIRDL-GELEEKNLQINNENIT-----YLIIQEDILVVEIGKLKSATIMSAWLQHLQVC 965 Query: 989 ASGGNGESRLFLRKDGE----------WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVL 1038 L + + F P+ + A+ L + +G++ V Sbjct: 966 LYDDKPRKTLIISRSTTKSSQHQYKLSAEFTPILKKDAMEMLQTIYMLVEQGLTECWPVP 1025 Query: 1039 PESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR--- 1095 P+SG K Y + ++ F + ++G+ GE + + Sbjct: 1026 PQSGWELFKARYMKKTNSN-----------NYFKKKWKGSFNQHGENHNSEMILCFGYDC 1074 Query: 1096 QLTPETMEAIVEQSQR-FLLPLF 1117 I E P+ Sbjct: 1075 DAELFLGNKIFENCLNILYQPIL 1097 >UniRef50_Q3BM39 Exodeoxyribonuclease V, gamma chain n=19 Tax=Xanthomonadaceae RepID=Q3BM39_XANC5 Length = 1184 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 317/1162 (27%), Positives = 507/1162 (43%), Gaps = 105/1162 (9%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPF-EPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 R+Y SN LD L AL+ + R P +PE++L+ M +WLQ TL+ + G+AAN+ Sbjct: 56 FRLYPSNALDTLAALLAQELRRPMPGQPLLQPEVVLIPQVAMRRWLQSTLAAEHGVAANL 115 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLP-QLLEREDFTLLRHYLTDDS 119 +F P F+ R L + + + W+L L L L YL+ D Sbjct: 116 EFLTPGEFVARALERNLG--AADDDLDMATTQWRLYAALQSDLGSDAALAPLAGYLS-DG 172 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 D K + L+ + A +F++Y +R DWL +WE G + QA LW+++ Sbjct: 173 DALKPWALAGELASVFEKYQAWRRDWLLRWEAGADPDDP------QARLWRSIA------ 220 Query: 180 GQPRWHRANLYQRFIETLESAT-TCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 R +RA ++++ A P GLP RVF I + P L+ L + +H Sbjct: 221 -TGRQYRARRIGQYLDRHARADGPLPQGLPPRVFAFAILNISPDVLRVLATQARVGTLHF 279 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 P + YWGD++ + + + + NP Sbjct: 280 YLPTPTQGYWGDLQTLWQRRREDGAVQLFAEQV-----------------------QENP 316 Query: 299 LLASWGKLGRDYIYLLSDLESSQ---ELDAFVDVTP------------DNLLHNIQSDIL 343 LL +WG GRD++ L+ D E E+ A+ D D+LL +QSD+ Sbjct: 317 LLQAWGAAGRDFMALVGDYEVVHPLAEIAAYADPLESGRRTLADGGLGDSLLRRMQSDLF 376 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE---D 400 A V D S+ H CH+ RE++VLHD+L A+L++ D Sbjct: 377 HRRAPAAEAVLPAVNLH----------DPSLQVHACHTRLRELQVLHDQLRALLDDARFD 426 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 P L PR+I V+ +ID Y P++ AVFGS D LPYA++D S + E F++LL L Sbjct: 427 PPLQPREIAVLSPNIDPYVPYLDAVFGSHGNDDALPYALADASPLASESLAEVFLTLLGL 486 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 P +RF ++L LL +A + E GL LR W++ +G RWG+D + R+ + P Sbjct: 487 PIARFGLHEILDLLASAPIAEAAGLDEAGLERLRSWLHAAGARWGLDAAHRRQHQAPGDD 546 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 +TWRF L R+LLG+A A + V P+ + G + L LL L + LA+ Sbjct: 547 AYTWRFALDRLLLGHA-SGADEDIDGVAPWPQLEGSALAALDTLLRLLRVLERHQAALAE 605 Query: 581 ERPLEEWLPVCRDMLNAFFLPD---AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 EW +L A + A+ + + + A+Y VP ++ Sbjct: 606 AMTPVEWRERLLGLLEALIPTMPTAPRAQRALDRLRALIVQFARDAMRAEYAGKVPAEVV 665 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD-- 695 R A L + L G ++ ++PMR +PF+V+CLLGMNDG +PR+ G + Sbjct: 666 RAHFAAVLGESDTRAPLLTGGISFGRMVPMRLLPFRVICLLGMNDGDFPRRDPAAGLNRL 725 Query: 696 ---LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 L +++ + GDRS R+DDR+LFL+ SAQ Y+SY+G +D S R PSVLV EL+ Sbjct: 726 TAELGTERRRHGDRSTREDDRFLFLQLFASAQDVFYLSYLGADARDGSVREPSVLVSELL 785 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS- 811 Q H AL+ ++ + + R SY R+W PA Sbjct: 786 ASAAQYHA--ASNALDTLVVRHPLQPFAAAAFGALGDESDAGADPRRFSYRRQWRPAVDS 843 Query: 812 ---QAGKAHSEFVQPLPFT---LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 Q LP LP ++ ++ L+R P F + RL + E Sbjct: 844 LVGQRQPLAPWVAGALPAEGIALPASMSIDALRRLLTDPAGQFLRHRLGMRLPDPAGEDA 903 Query: 866 DTEPFI--LEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQE 923 D EP + GL +Y + QQ+ +A + D E L+ R RA LP G G + + + Sbjct: 904 DLEPLLAPTRGLDQYGLQQQIFDAALAG-DTEHLYARLRARALLPSGPLGRRQLDERVAQ 962 Query: 924 MQQLADRVIACRQPGQSM--EIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW 981 ++ AD R + + + + +++ G +P G+ R + LS ++ Sbjct: 963 LRPYADAFRQWRGESPAQSRRLQVQIDEIELHGRVPGWYASGVGRVQVGALSGRSAIRHG 1022 Query: 982 LEHLVYCASGGNGESRLFLRKDGEWRFPPLAAE-----QALHYLSQLIEGYREGMSAPLL 1036 LE L+ A+G + F D P+ A+ QA L++L++ YR+G+ PL Sbjct: 1023 LEWLLLRAAGEHAPYVRFFEHDDGLGPHPIDAQPLSQTQARTALAELLQLYRQGLQMPLA 1082 Query: 1037 VLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ 1096 P S + + D + + + ++ + +++ + + G D + Sbjct: 1083 FAPYSSWKYHQAARGGDLDKAIKEAAGQWQSGFGWSESHSPELRLVTRGRDPF------- 1135 Query: 1097 LTPETMEAIVEQSQRFLLPLFR 1118 + S R L + Sbjct: 1136 ADAQRFAEFAATSHRVYALLEQ 1157 >UniRef50_Q89AB4 Exodeoxyribonuclease V gamma chain n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=EX5C_BUCBP Length = 1111 Score = 555 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 271/1125 (24%), Positives = 535/1125 (47%), Gaps = 29/1125 (2%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +Y S + ++ ++ E L +P E+ +V + QW+++ +++K+ + NI Sbjct: 1 MFTLYKSLKFNLFVKSAFKVILNEPLLNPLTKEIFIVNNKETEQWIKIFIAKKYKVCTNI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 F FI ++ + P++ +S F+K S+ WK++ + P + LL ++ ++ Sbjct: 61 KFFKLKHFILNILKQNTPKLYSKSEFSKYSIMWKIINI-PDIQH-----LLTKIVSKNNT 114 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 LF+++S ++LF YL YRPD++ +WE + Q WQ +W +++YT Sbjct: 115 YSTLFKIASSISNLFQLYLKYRPDYIKKWEQKSNIPKTRLKQKWQQIIWMRIIKYTKDAN 174 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 +P H +NL I+ ++ LP R+FI I+ + P Y L+++ K+ +H + Sbjct: 175 KPILHFSNLLYDSIKKMQRNNFINTKLPVRIFIFNITPITPQYAIFLKSISKYCSVHFFY 234 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 + + ++ + +L S+N +++ Sbjct: 235 ATASYN-----DKQMFSTSFIKFKQTQEISNNQLLSLLHSKNKNIIYHEIENFQKNTKFQ 289 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 + W + L L + ++ + ++LL +Q+ IL L + + + Sbjct: 290 SYWITYEYE-QMLFLSLIKDKTINLNFKIKQNSLLQYLQNKILNLH-----SIQKKNNEQ 343 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 +NK + D S++ H CH+ RE+EVLH+ LL +L ++ + +D++V+ ++D+Y P Sbjct: 344 ENNKILILKTDKSLSIHSCHTLIREIEVLHNNLLNILNDNNDILFQDVLVISKNLDTYIP 403 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +I +F SA + ++P++I+ + ++ + + L+ LP+ + LL++P L Sbjct: 404 YINQIFNSASSKNFIPFSINYKN-IKNIEFYKTILELIDLPNIELNINKITNLLNIPTLL 462 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 + I E+ + L Q +N++ I+W D+ + L W GL R+ LG + + Sbjct: 463 KKVQINEQEIPILLQIINQTEIQWENDNILSNDW-LSNDITKCWEHGLQRIFLGQIINNI 521 Query: 541 QG-EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 W++++PY+E S L + L SL+ LN W++ L++ + L W + +LN FF Sbjct: 522 DYKFWENIVPYNEFSTLYYNIFNKLISLISLLNKWKKILSKPKFLSHWDITFKKLLNDFF 581 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 + + LI ++W II G+ +Y + ++LL++EL + S +G + Sbjct: 582 TDHEQKQPEAKLIIKKWTEIIHSGMQEKYTKKISITLLKNELCNSVSYISQSNYLFSGKI 641 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD---LMSQKPKRGDRSRRDDDRYLF 716 C + +IPFK++ L+G+ND + FD L+ P+ D + + L Sbjct: 642 TFCNNFTLTNIPFKIIYLIGLNDNI--SSNTHESFDIYNLLKLHPRAYDPCDEINHKNLL 699 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 L+ L+SA++ YIS+ S + + ++I YI Q Y+ N +++ + Sbjct: 700 LKTLLSAKKFFYISHQIVSNNYKKLNNIPIAIDKIIKYITQYFYIKNKNKDNFNDNLKDI 759 Query: 777 KAHLTCLHTRMPFDPQNY-QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLE 835 K+H+ +T + +N+ + ++ A+ +H EF++ LP +T+ Sbjct: 760 KSHIYHNYTFYAHEKRNFLEKLNYPNFNTTIWKMATLINNSHKEFIKKLPSIKNQTINYN 819 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE 895 TL FW +P++ FF +RL + T ++ + L +Y++N+ LL + + + Sbjct: 820 TLILFWKNPIQTFFHVRLNIQLNTTKNKHMHQNKHFINKLDQYKMNKTLLKFFLYKQNTN 879 Query: 896 RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC-NGVQITG 954 +LF+ ++ G +P G I WE + + L D+++ ++ + + + N + G Sbjct: 880 QLFQYYKNIGIIPNNNIGNIIWEYTKKLITPLYDQIMKIKKILNNSKFCINVKNKCMLHG 939 Query: 955 WLPQV-QPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAA 1013 L + GLLRW+ + LS + WLEHL+YC+ S L F L Sbjct: 940 QLKNINSSGGLLRWKATKLSFQDIISCWLEHLLYCSLYKKHNSILIGTNHQIITFYKLEN 999 Query: 1014 EQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQ 1073 + A +YL + I GY +GM P+ +L +SG W+ YD +N+ + + A FL Sbjct: 1000 KTAKYYLKKYISGYFDGMEQPI-LLTKSGINWINAIYDKKNNKFYTNTNKNLNAYKIFLN 1058 Query: 1074 AYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 + GN + GE DD + Q++ LT + ++ I + ++++L P+ + Sbjct: 1059 TWNGNNWITGEKDDPYIQKMIVYLTKKNIQKIYKTTKKWLTPILK 1103 >UniRef50_A2C3H2 Possible exodeoxyribonuclease V subunit C 125 kD polypeptide n=2 Tax=Prochlorococcus marinus RepID=A2C3H2_PROM1 Length = 1097 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 226/1167 (19%), Positives = 443/1167 (37%), Gaps = 122/1167 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +Y SN+ + L ++ + + E I+V + ++WL LS I A + Sbjct: 1 MLTIYRSNKAEWLAEILGQELRLNPPE-ITEEVNIIVSTWPSSRWLSEKLSIINNINALV 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKE-SAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 +P P +++ + R++ P E + K + W ++ LLP+L++ E+ ++R +L Sbjct: 60 KYPFPGTYLKRLVKRIIGIDPDEKDPWEKNQLVWNILELLPELMKEEEAQVIRSWLEISD 119 Query: 120 DK-----RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 K L+ L++ A+ FD Y++YRP+ + QW + + E + LW+ ++ Sbjct: 120 KKDTQINLNLWDLANNIAETFDDYILYRPEIIKQWLSKKTKKRSREISVNKNILWQEILF 179 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 + ++ I+ L+ P +++ G+S+L P+ + +QA K I Sbjct: 180 NLLYKKINKDPFCIQVEKAIKRLKKDDISKLDYPKNLYVYGLSSLAPLQIDLIQAFSKVI 239 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 I + +PC W + + D + Sbjct: 240 NIKIYIISPCNDLWQRCEARRLQFR-----------------------NTWNTPPDRQWL 276 Query: 295 VGNPLL-ASWGKLGRDYIYLLS-----DLESSQELDAFVDVTPDNLLHNIQSDILELENR 348 + +P L A G++G +Y LL L E D F +L +I ++ N Sbjct: 277 IESPRLEAFLGRMGAEYQQLLEGSGEYQLGDRNEEDIF------SLTADIATNKGNKPNL 330 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 ++S+N + D S+ F R+VEV+ D +L + ++ + PRDI Sbjct: 331 LEQLQQELLSTKSENILTKEKSDKSLLFLKSPGKYRQVEVIRDYILQLFSDNREIQPRDI 390 Query: 409 IVMVADIDSYSPFIQAVFGSAPAD-RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 ++M +DSY+P I +VF + + LP+ I+D+ ++ ++L + SR + Sbjct: 391 LIMTPQVDSYAPIITSVFNNIDKNTTQLPWVITDKSQEDKVGLIHFVLNLFEISVSRLTA 450 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 LL P L + +I+ + + + + + +G WG+D H+ + Sbjct: 451 SIFENLLINPALRTQQNISIDEVSDIIKNLQSAGFTWGLDSSERY-----GEETHSLCWC 505 Query: 528 LTRMLLGYAMESAQ-GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 L R LLG + + PY E+ AE + +L +L + + +R +E Sbjct: 506 LERFLLGLVLPDNPINGISHISPYSENIS-SAEFIKAW-GILSKLCNYIDVIRSKRSCKE 563 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 W+ + ++ F E + + + +++D + + L Sbjct: 564 WIKLITSLVKDLFGDGGEWAWEEQQLLTVVNNWG--LITDNCELEIDCLVVKDIITKALS 621 Query: 647 QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR 706 G + I L PMR+IP K++ ++G+ +PR F+L+ +K + GD Sbjct: 622 STNGKFGHRTGKITISALEPMRAIPHKIIIIMGLESRTFPRIENRRSFNLLERKRELGDP 681 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA 766 ++ D DRY LEALIS +Q L +S+ + + + P +Q+ ++Y+ + Sbjct: 682 NQYDKDRYSLLEALISTRQNLLVSWNSKDEKTGEDLEPPSPIQQWLNYLKIKLGDNTFKD 741 Query: 767 LNCDESEARVKA-HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 + + + + + AREWL A LP Sbjct: 742 ILIEPPANPLDHFNFIKTENSQIMSC-----DRKNLEAREWLEKAI----PTKNISLALP 792 Query: 826 FTLPETVPLETLQRF--------WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR 877 + + + L+ + +P + + ++ R + I D + L L R Sbjct: 793 -LKRKEINVSELKSYSFEKTKEWLLNPQITWLKEH-EIQSREFVNLIEDNDFLELSELER 850 Query: 878 YQINQQ------LLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV 931 Y++ + LLN ++D+ + G P G I + + L + Sbjct: 851 YKLLKHRLQSSDLLNINHTKNDSNYWEENYSGKGVFPPKGSGLIEKDLLQERWNNLISAI 910 Query: 932 IACRQ------PGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL 985 A + Q +E + G + ++ L M WL HL Sbjct: 911 YATGKITKRSIEMQELEGEFYFGGKNL------------IQIEVGSLKYKTLMNGWLNHL 958 Query: 986 VYCASGGNGESRLFLRKDGEWR----------FPPLAAEQALHYLSQLIEGYREGMSAPL 1035 A+ L + K ++R P+ ++A L QL G + Sbjct: 959 YLSANSSFNYKTLIISKKTDYRKKIQFEVSKEILPINTKEAKKNLRQLHRLATAGRNNCW 1018 Query: 1036 LVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR 1095 + PESG + D + F + +EG++ +GE + + + + Sbjct: 1019 PIPPESGLDYALATKDNNKNEQ-----------DLFQKKWEGDLYRQGERETLAMELCFG 1067 Query: 1096 Q----LTPETMEAIVEQSQRFLLPLFR 1118 + T E+ + P+ + Sbjct: 1068 KKCKASTFLDFESFNDVLMTLYEPILK 1094 >UniRef50_C4GHY2 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GHY2_9NEIS Length = 1184 Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 289/1214 (23%), Positives = 486/1214 (40%), Gaps = 134/1214 (11%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +Y SNRL+ + ++ I + L++PF E I++QS GM +++ L+++ GIAAN+ Sbjct: 1 MLHLYQSNRLEDIAQMLARIQQVAPLENPFAAEEIVIQSQGMRRYISQYLARETGIAANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLL--PQLLEREDFTLLRHYLTD- 117 F LPA W + +P+IP S F+ + M W+L+ L + + DF R L Sbjct: 61 RFSLPAGLAWRLMREAMPDIPALSPFSSEVMRWRLLALFQSDEFAQSPDFAAARQALAPY 120 Query: 118 -DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLG-----EAQAWQAPL--- 168 + +QL+ + AD+FDQYLVYRPDW+ W G LV L + Q WQA L Sbjct: 121 LHNGDYAAYQLAGQLADVFDQYLVYRPDWIETWAAGKLVPELAHSRSADTQIWQAQLWQH 180 Query: 169 --------------WKALVEYTHQLGQPRWHR------ANLYQRFIETLESATTCPPGLP 208 W+ L++ + R A L +++ L Sbjct: 181 LDDGKQGAPHRVQLWRTLMQSLARPNPRLPQRYFVFGIATLAPMYLQLLAQLAQHSQ--- 237 Query: 209 SRVFICGIS---------------------------------ALPPVYLQALQALGKH-- 233 V I ++ +L L + Sbjct: 238 --VHIFALNPSQAYWGNIIEPAQILNQTQTADLSYQGHPLLASLGKQGRDFFNELAEVEA 295 Query: 234 -IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE 292 +++ + P ++ L + + S+ Q Sbjct: 296 QLDLDSYTSEPQSPSLLHSIQYHIQSQTLPETAHANGWLAAHQDYVHSQPRFQAAQQQLN 355 Query: 293 QDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAG 352 Q L G L + + + L Q+ I +++ Sbjct: 356 QQYQTALAPYQGSLKTNAVSFGEAKTPNTPNTNETPDLFSGCLTPEQNAIRQIQLTHQQN 415 Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 + + + + D SI H HSP RE+++L D+LL +L + P P DI ++ Sbjct: 416 LALAQLN----------ADPSIQIHSAHSPLRELQILKDQLLVLLAQHPDWQPHDIAILT 465 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 I+ Y+P+I+A+FG + LPY++SD + P+L+A L+L DSRF ++ ++A Sbjct: 466 PHIEPYTPYIEAIFGKH-SPYPLPYSLSDTQIAHRQPLLDALAQTLALMDSRFEADKLIA 524 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 LLD ++ A +T + L + + + IRWG D + Q+TW+ GL R++ Sbjct: 525 LLDNELILATHRLTRDDLPLIHDTIAQLNIRWGSDAAQRSQHSSQPNAQYTWQQGLERLV 584 Query: 533 LGYAMES--AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 LG+ + A W ++ P+ + + A+L+ L + + +W Sbjct: 585 LGFMLPENPANPLWHNIAPHSS-NPSHQAPLSRFAALVATLIRHQNQWQTPATVPQWNER 643 Query: 591 CRDMLNAFFLPDAETE-AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 +++N P ++ + A +E E A Y + ++ L Q L + Sbjct: 644 IHNLMNDLITPQSDDDHQAHQQLEAALAQWQNEAQTAHYTQTINQTIAIQHLNQYLASQN 703 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 FL G + IC+++PMRS+PFKV+CLLG+NDG YPR +DL++Q P++GDR+RR Sbjct: 704 -DAGFLRGGITICSMVPMRSLPFKVLCLLGLNDGDYPRNTKAAPYDLIAQHPQKGDRARR 762 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 DDDRYLFLEA++SA++ LY+SYIG+ I+ + ER PS L+ ELID I +P Sbjct: 763 DDDRYLFLEAILSAREVLYLSYIGKDIRTDEERAPSTLIGELIDTIAALTQIPA------ 816 Query: 770 DESEARVKAHLTCLHTRMPFDPQNY--------QPGERQSYAREWLPAASQAGKAHSEFV 821 ++ H H PF P+ Y + S +++ A + + F+ Sbjct: 817 ----NQLNQHWITQHPLQPFSPKYYTGSLKNHSSAAKLISTRQDYAQALNTPQPPAAPFL 872 Query: 822 QPLPFT----LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR 877 Q +P T ++W +P R + + L + P +EPF ++ Sbjct: 873 QNYTPAHETQEQPEIPQATFLQYWRNPNRQWLKHTLGWQAPHTQAAHPSSEPFTIDNP-- 930 Query: 878 YQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP 937 Q++ A D L A LP G F + + Q L +I Sbjct: 931 RQLDTAYTQARQHNQDFAELATTLTAQSQLPTGEFNTLIAQEQAIAAAGLNSELIQ-SPR 989 Query: 938 GQSMEIDLACNGVQITGWLPQVQPDGLLRW---------RPSLLSVAQGMQLWLEHLVYC 988 L + L G + + + L + ++L L HL+Y Sbjct: 990 HPDQTGSLKLPTGTLNYTLSHNHQHGQILYAHQFLPNHNTQATLQASDSIELLLRHLIYS 1049 Query: 989 ASGGN--GESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWL 1046 A+ + +L PP+A E A L+Q + Y++G P+ P A Sbjct: 1050 AAAPQPTPQPTHYLSLHQSITLPPIAQETAQATLAQWLAAYQQGQQHPIPFFPRVTLAVA 1109 Query: 1047 KTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR--QLTPETMEA 1104 + Y + KA+ Y + D + ++ TP Sbjct: 1110 RAYYTGK-------TPDWDKAQKAAHAVYHKGYTGFAQADYPETKLIYGRDDDTPINSPT 1162 Query: 1105 IVEQSQRFLLPLFR 1118 ++ PL Sbjct: 1163 FRHLTENLFAPLAD 1176 >UniRef50_UPI0001C32181 exodeoxyribonuclease V, gamma subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32181 Length = 1143 Score = 544 bits (1402), Expect = e-153, Method: Composition-based stats. Identities = 307/1204 (25%), Positives = 476/1204 (39%), Gaps = 148/1204 (12%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG----- 55 ML V+H++ D L A + ++ L DPF E++ V + G+ +WL LS + G Sbjct: 1 MLHVHHADGADRLVAALAEVLTVR-LADPFAAEVVAVPTRGVERWLAQRLSGRLGTSPGA 59 Query: 56 ---IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLR 112 I AN+ FP P + + + + W L+ L+ + L Sbjct: 60 GDGICANVAFPTPRRVVEEAIAAASGLDAATDPWRPERALWPLLELVDAASDEAWLGRLT 119 Query: 113 HYLTDD-SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEG----LGEAQAWQAP 167 +L D+ + A LF +Y ++RP L W G +G L WQA Sbjct: 120 AHLDRAAGDRSRRLSAVRHVATLFARYALHRPAMLRAWAAGSDEDGAGGALDAEHRWQAE 179 Query: 168 LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQAL 227 LW+ L E G A L L LP R+ + G+++LP LQ L Sbjct: 180 LWRRLRERVGVPG-----PAELLDLGRARLVE-DPGLSDLPERISLFGLTSLPARDLQLL 233 Query: 228 QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF 287 +AL + ++HL P W I D A +LTR + Sbjct: 234 RALAERRDVHLFLLMPSPAAWRGIADAAGRGPILTRGQAL-------------------- 273 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDL--ESSQELDAFVDVTPDNLLHNIQSDILEL 345 +PLLASWG+ GR+ LL L E+ PD LL +Q+DI Sbjct: 274 ---SAALPAHPLLASWGRDGRELQLLLEPLPTEAVHADAIGAGDEPDTLLARVQADIRAD 330 Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 D L D+S+ HVCH R+VEVL D +L L +DP+L P Sbjct: 331 RTPRE-----------DEPVQLGDGDASVQVHVCHGRARQVEVLRDAILHALADDPSLEP 379 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRY-----------------LPYAISDRRARQSH 448 RD+IVM DI++++P ++A FG+ AD L ++DR RQ++ Sbjct: 380 RDVIVMCPDIETFAPLVEATFGAGEADVGEALADDAVDLSGAHPAELRVRLADRSLRQTN 439 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 PVL LL L +R + ++L L+D + RF + E+ L + WV SGIRWG+D Sbjct: 440 PVLGVVTKLLELATARVTASELLDLVDREPVRRRFRLEEDELARVEDWVAASGIRWGLDA 499 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQG-EWQSVLPYDESSGLIAELVGHLASL 567 + L Q TW GL R+L G AM G VLP D+ +L G A L Sbjct: 500 AHRAPFRLQHVPQGTWAAGLDRLLTGVAMAERPGHTLAGVLPLDDVDSSAIDLAGRFAEL 559 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 L +L LA +P+ W + + ++Q ++ E Sbjct: 560 LDRLAAALDELAAPKPISAWATAIAEAADTMTATTPRDAWQRAELQQLLADVVEEATNDG 619 Query: 628 YGDAVPL--SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 AV L + + L RL F G + +CTL PMRS+P +V+CLLG++D V+ Sbjct: 620 VASAVSLDVADVAALLGGRLAGRPTRTNFRTGHLTVCTLQPMRSVPHRVICLLGLDDDVF 679 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 PR+ G D++ +P GDR R +DR + L+AL++A +L ++Y GRS + N+ER P+ Sbjct: 680 PRRSPRDGDDVLLDEPWIGDRDGRSEDRQILLDALMAAGDRLIVTYSGRSERTNAERAPA 739 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER-----Q 800 V + EL+D I + C R + + H PFD N+ P Sbjct: 740 VPIGELLDVIDR---------TACAADGGRARDAVLVRHPLQPFDAANFAPSTLVPQRAW 790 Query: 801 SYAREWLPAASQAGKAH----SEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN 856 S+ L A G +PL + + L+ L F HPVRAF + RL V Sbjct: 791 SFDGVTLEGARALGGERGSRPPFLPRPLQPQDADVIELDQLLAFVGHPVRAFLRQRLGVG 850 Query: 857 FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 E D+ P L+ L+R+ + +LL A D RA G +P GA G+ Sbjct: 851 VDVGAGERSDSLPIELDPLARWGLGARLLAARRAGVDVGVAVADERARGSVPPGALGDQV 910 Query: 917 WETQCQEMQQLADRVIA---CRQPGQSMEIDLAC-NGVQITGWLPQVQPDGLLRWRPSLL 972 E++ + P +++++ +A +G + G + V L S + Sbjct: 911 LRGVVAEVEAILGAAAETVGAGGPLRTLDVRIALEDGRTLAGTIGGVGQYVLPVVTYSRV 970 Query: 973 SVAQGMQLWLEHLVYCAS---------------GGNGESRLFLRKDGEWRFPPLAAEQAL 1017 + M+ W+ L A+ + R P + +A Sbjct: 971 DPRRRMESWVRLLALTAAFPERSLVATTVGRARRDVDRATTIARIAQPGGEPDVRRTRAH 1030 Query: 1018 HYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEG 1077 L+++++ Y GM PL + ++ + A + A+E Sbjct: 1031 AELARIVDLYDRGMREPLPLFRQTS---------------AAYAAGGATAVARAHTAWET 1075 Query: 1078 NMMVRGEGDDIWYQRLWR--------------------QLTPETMEAIVEQSQRFLLPLF 1117 + E D +Q ++ ++R L Sbjct: 1076 DFQPLREDLDPEHQLVFGGTLPFERLLAEAPRDDEQGEDWDMSEPSRFGRYARRLWSGLL 1135 Query: 1118 RFNQ 1121 + Sbjct: 1136 AHEE 1139 >UniRef50_C6HV34 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HV34_9BACT Length = 1124 Score = 542 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 299/1172 (25%), Positives = 499/1172 (42%), Gaps = 111/1172 (9%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLD---DPFEPEMILVQSTGMAQWLQMTLSQKFGIAA 58 +R++ S+R+++L + + DP P ++ Q+ +WL L+++ GI+A Sbjct: 3 IRLFESHRMEILAEAFVATLASAAEEGDLDPLRPRTVIPQNPVTGRWLSFYLARRTGISA 62 Query: 59 NIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 ++D PL +I F R+ F+++++ +++ LLP LL F+ + H+ D+ Sbjct: 63 SLDLPLAGRYIRGFFDRLHGPASGTLHFDRETLLLRILALLPDLLPLPAFSPVAHFAGDE 122 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL--VEGLGEAQAWQAPLWKALVEYT 176 + +L+ L++ ADL+D+ ++YRP+ L WE G + + W A LW+ L Sbjct: 123 PESLRLYDLAALLADLYDRSMIYRPELLLAWEEGLGGRDDDPVGPEGWPAVLWRLL---- 178 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKH--I 234 HRA + RF+ P LP + + G++ + P+ L+ + LG+ Sbjct: 179 -SGPDRPLHRARMMVRFLS--GEDPVPPEILPPALTLFGLTGMAPLDLRFFRTLGERHGC 235 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 + L F NP R YWGD+ + + Sbjct: 236 AVDLFFLNPSREYWGDVVRSRRREETPESLQP-------------------------YLF 270 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 G PLL+SWG R L+++ + F P LL IQ DIL L +R + Sbjct: 271 RGTPLLSSWGGEFRTVHESLAEIPEAHR--LFFGTEPGGLLGQIQEDILTLFDRGEEVRS 328 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 ++ + D S+ RE+E+L DRLL + DPTLTP D++V+ D Sbjct: 329 G-----RIERKEIPRADRSVEIVSATGRVREIEMLRDRLLELFAGDPTLTPEDVVVLAPD 383 Query: 415 IDSYSPFIQAVFG---------------------SAPADRYLPYAISDRRARQSHPVLEA 453 I Y+ +++VF S D +P+ ISDRR + P +A Sbjct: 384 ILPYAGIVRSVFSPGISPSGGRAGTNGGEGSAGSSEDGDPRIPFVISDRRETDASPAFQA 443 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 + LLSLP R ++ LL VP +A RFD+ + + +R+ + E G RWG D ++ E Sbjct: 444 LLLLLSLPGERVTVSHLVTLLAVPSIARRFDLGGQKIDRIREILAEGGFRWGRDIEDRSE 503 Query: 514 LELPATGQHTWRFGLTRMLLGYAM-ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 + P+ H++ +GL R+LLGYA E V P + E+ G L+ L L+ Sbjct: 504 V-APSVDTHSFFWGLDRLLLGYACGPEEAPEGLPVPPVAVTEDPGGEIAGALSRFLWTLD 562 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 L P EW + +L FF P AE + + ++ I A + + Sbjct: 563 RHLERLKDPHPAREWPGLLATILEIFFDP-AEGDPVLEILFALPGEIREGFSRASFDGEI 621 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 + +A+ + RFL G V+ ++P+RS+PF+VVCLLG+NDG +PR P Sbjct: 622 SSRWMGRHIARMAESREGRDRFLTGGVSFGRMVPLRSLPFRVVCLLGLNDGEFPRVHHPP 681 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 FD ++ +P+ GDRSRR+DDR LFLEAL+SA+Q L++SY+GR +D S + PSVL++E Sbjct: 682 SFDWLAARPRPGDRSRREDDRTLFLEALLSARQVLWLSYLGRESRDGSPKEPSVLLREFE 741 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN--YQPGERQSYAREWLPAA 810 D + + G E + L+ H DP+ + R+ Sbjct: 742 DVVAEGFTGEGGEEIQKQILLEAPVDPLSPSHYGDSPDPRLHSFSRSWREVLDASRNDGW 801 Query: 811 SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 + + P+P + L+ L+ F ++P R F RL + R + ++PD EPF Sbjct: 802 KAPVFWDRDLLLPMPEPGAAGILLDDLRFFHSNPARFFLLRRLGFSSRAREIDLPDDEPF 861 Query: 871 ILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR 930 L L +++ L +R +P+ G + + R Sbjct: 862 SLS-----------LREILKG-----LDQRSFEVDGIPWPPLGPLQLSEGIRHKGDHVGR 905 Query: 931 VIACR----QPGQSMEIDLACNGVQITGWLPQV------QPDGLLRWRPSLLSVAQGMQL 980 + +++EI L GV++ G L + ++ P + + + Sbjct: 906 IGRLLGLLSGEPEAVEISLELLGVRLVGRLSGILTKTEGGRVRVVDLWPGKIYPSHQVTA 965 Query: 981 WLEHLVYCASGGNGESRLFLR----KDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLL 1036 +LEHLV C L + F P A L +E ++ PL Sbjct: 966 YLEHLVACRGIPGYVGTLLCGVVPHNPEAFLFWPSPP--AEGGLESFVEAFQVAGERPLP 1023 Query: 1037 VLPESGGAWLKTCYDA--QNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWY---- 1090 PE A+++ + ++++ ++A + A G D Sbjct: 1024 FDPEISLAYIRKIRSKAAREVQEGEEETVGRQAAMRAWDAPAPPDRDEGLRDPRSLPTFW 1083 Query: 1091 -QRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 +RL+ + R L PLFR Q Sbjct: 1084 SRRLFAGRPLPLEPDFPSWAHRLLDPLFREQQ 1115 >UniRef50_D0L8X4 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L8X4_GORB4 Length = 1151 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 274/1197 (22%), Positives = 454/1197 (37%), Gaps = 131/1197 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLS--------Q 52 ML ++ + R D A + LDDP PE++ V + G+ +WLQ L+ + Sbjct: 1 MLHLHRAERTDT-LADALADLLATPLDDPMSPEIVAVPAAGVERWLQQHLATRIGCGTTR 59 Query: 53 KFGIAANIDFPLPASFIWDMFVRVLPEIP----------------KESAFNKQSMSWKLM 96 GIAANI+F PA+ + +L E + + + W ++ Sbjct: 60 SDGIAANIEFLSPAALADAVTAALLTEAAGTDTANAGHEHSAGGGADDPWRPSVLVWSVL 119 Query: 97 TLLPQLLEREDFTLLRHYLTDDSDKR----KLFQLSSKAADLFDQYLVYRPDWLAQWETG 152 +L ++ + ++ ++ + + F + ADLF++Y RP LA W G Sbjct: 120 RVLDDRIDDPELAMIARHVGGGDETSPRIGRRFATARHLADLFERYGRARPTMLAAWAQG 179 Query: 153 HLVEG----LGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLP 208 +G +G +WQ W+AL + H A L A LP Sbjct: 180 RDEDGAGGHIGADLSWQPGFWRALRAEVGRP-----HPAEALGDLCARL-RANPAVTDLP 233 Query: 209 SRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHS 268 R+ + G + + + L AL +H ++H+ +P W I Sbjct: 234 ERLSVFGPTRVTEEFRALLVALARHRDVHVFLPHPSPVLWEAISSS-------------- 279 Query: 269 FEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVD 328 + R E + +PLLAS RD L L+ ++D + Sbjct: 280 ----TVAGDRPEETHSPRRADRRLPAIAHPLLASL---SRDVQELELRLQPHADVDVHHE 332 Query: 329 VTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEV 388 ++L + G D ++ P DSS+ H CH P+R+VEV Sbjct: 333 ----SVLG---------HRPTLLGALHAGLCADDLRQQAVPADSSVEIHACHGPERQVEV 379 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR---YLPYAISDRRAR 445 L DRLL + +DPTL PRD+++M D+++++P I+ FG A L ++DR R Sbjct: 380 LRDRLLHLFADDPTLQPRDVLIMCPDVETFAPLIRGAFGQAGLAHPAFALRVRLADRGVR 439 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 Q +P+L+ +++ L R + +V LL + + RFD+T++ L +R W+ S +RWG Sbjct: 440 QVNPILDVVGAVVELAAGRVSAGEVADLLGLEPVRTRFDLTDDDLDRVRDWLAGSNVRWG 499 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS-VLPYDESSGLIAELVGHL 564 I L GQ T+ GL R+LLG E GEW LP +L G Sbjct: 500 IGLGQRARFGLDGFGQGTFEAGLDRILLGVVAEEQDGEWLGTALPLAGVESTEIDLAGRF 559 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 A L +L+ L + P + W +++A + + E Sbjct: 560 AEFLARLSTTLEALTETGPRDRWRDALTGVVDALTATSPGDDWQRAQAIRLITDAFGESG 619 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 A+ + L+ +RD +A L F G + +CT++PMRS+P +V+ LLG++ V Sbjct: 620 PAEPT-VLRLADVRDLMAALLAGRPTRSNFRTGELTVCTMVPMRSVPHRVIVLLGIDGEV 678 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 +PR G DL+ P G+R+ RD+DR FL+A+ +A + L + Y G P Sbjct: 679 FPRVQRIDGDDLLGVDPLVGERNPRDEDRQCFLDAICAATETLLVFYSGADPVSGRRIPP 738 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG------E 798 +V+V EL D + A D HT FD +N+ G Sbjct: 739 AVVVSELADTLRTLIDPARSPAAAVDP---------VRHHTLHGFDQRNFLDGGVAGVAG 789 Query: 799 RQSYAREWLPAASQAGKAHSEFVQPLPFTLP--------ETVPLETLQRFWAHPVRAFFQ 850 S+ E L A + V ++P + L+ L F P+ + + Sbjct: 790 PFSHDAELLDGARAMRTPATTAVPMAARSVPVDDDPDEAGDIDLDLLIEFHTDPIAGYLR 849 Query: 851 MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYG 910 RL +S D L+ L + I ++ L ++ E G LP Sbjct: 850 QRLGARIPRAESAHDDQLDVDLDPLESWGIGERFLKRMLGGASIEECQAAELRRGTLPPF 909 Query: 911 AFGEIFWETQCQEMQQLADRVIACRQPGQS-MEIDLAC-NGVQITGWLPQVQPDGLLRWR 968 AFG + Q L V R + +++D+ +G ++ G +P V + Sbjct: 910 AFGTRTLASISTVAQNLYRNVAVLRDGSPAMLDVDVTLPDGRRLYGTVPNVFGQRFVTAT 969 Query: 969 PSLLSVAQGMQLWLE--HLVYCASGGNGESRLFLRKDGEWRFPPLA---------AEQAL 1017 S L Q + W+ + A GN + R A + A Sbjct: 970 YSRLKAKQQLTEWIRIVAVAAAADQGNPVAGRVDSGVVVGRAARGAGAARVTFGRPDDAA 1029 Query: 1018 HYLSQLIEGYREGMSAPLLVL----------------PESGGAWLKTCYDAQNDAMLDDD 1061 L LI G+ PL + P+ G + + + A L Sbjct: 1030 RILHDLIRIRDAGLEQPLPLPAEAAAAFAQHDAGGRRPDWGLVNARRSFSGKFGAHLQPH 1089 Query: 1062 STLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 L + +++ R +D + P ++ PL + Sbjct: 1090 VRLVFGGDALAEVTFEDILARKAVEDNVLAGIMAPADP-DDPLFCALARAIWSPLLQ 1145 >UniRef50_A2C8A0 Possible exodeoxyribonuclease V gamma chain n=4 Tax=Cyanobacteria RepID=A2C8A0_PROM3 Length = 1103 Score = 531 bits (1368), Expect = e-149, Method: Composition-based stats. Identities = 244/1166 (20%), Positives = 429/1166 (36%), Gaps = 111/1166 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +Y SNR + L ++ + F+ ++V + ++WL L+ GI+A + Sbjct: 1 MLTIYRSNRAEWLARVLAEQLRLAPPG-LFDSVDVVVNTWPTSRWLGEQLASVNGISALV 59 Query: 61 DFPLPASFIWDMFVRVLP-EIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 FP P S + + +L + E + + W L+ LLPQLLE E+ LR ++ Sbjct: 60 RFPFPGSRLRQLVRMILGIDSDAEDPWRASRLVWPLLDLLPQLLETEEAAPLREWVNRQP 119 Query: 120 DKRK-----LFQLSSKAADLFDQYLVYRPDWLAQWETGHL-----VEGLGEAQAWQAPLW 169 + +QL+ AD FD Y +YRP + QW G + + WQ Sbjct: 120 SRPGHLNRVQWQLARSIADAFDDYALYRPKLIHQWLEGSDRLLNSSQEMPLTLRWQPL-- 177 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 + R + L + LPS++ + G+S+L PV ++ +QA Sbjct: 178 ---LLRLLAERLNVEPFGIQVHRAVSKLRNGDHPAMALPSQLRLFGLSSLAPVQVELIQA 234 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L +++ + PC W + + Sbjct: 235 LSGLVDVQMFLLTPCPDLWQRCRSRRETL-----------------------GNEWTEPA 271 Query: 290 DGEQDVGNPLL-ASWGKLGRDYIYLLS-----DLESSQELDAFVDVTPDNLLHNIQSDIL 343 DG + P L A G++G ++ LL L QE D F + Sbjct: 272 DGFWLLEAPRLEAILGRMGAEFQQLLEGGGESQLGQWQEGDLFAAPATMACESGQEP--- 328 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 DSS+ F C R+V+++ D++L DP+L Sbjct: 329 ---TLLEQLQQQLVSPDDHQPLRRRQEDSSLQFLACPGQWRQVQLVRDQILQWFAADPSL 385 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPAD-RYLPYAISDRRARQSHPVLEAFISLLSLPD 462 PRD++VM ++ ++P + +VF A A LP+ ++DR + S + + + LL + Sbjct: 386 EPRDVLVMTPQVNRFAPLLASVFNDAAATGVELPWRLTDRSQQDSPGLTQGMLQLLQIAG 445 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 R + + LL P + + +++ L + + +G RWG+D + H Sbjct: 446 ERLTATALEGLLANPAIQQQQGFSQDDASSLSRCLQRTGFRWGLDAEER-----GGDETH 500 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 + + L R LLG + S G + GL + LL Q + + + R Sbjct: 501 SLIWCLDRWLLGLVLPSTPGLAPGGAA-PFAEGLEPAQLAKWWQLLAQFSRQLKEFRRAR 559 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 W+ + + + F + + +GA + +++ D L Sbjct: 560 TCGAWVELLQGFVEELFGDGGSWAWERQCLLIALEDWRQ--IGADCTLLLEAAVVADVLN 617 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 + L + G + + L PMR+IP +V+ L+G++ V+PR GF L+ Q+ + Sbjct: 618 EALSADSGRFGHRTGALTVSALEPMRAIPHRVIVLMGLDADVFPRHRERAGFHLLEQQRQ 677 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 GD D DRY+ LEAL+S +Q L I++ R R + VQ+ + + Sbjct: 678 LGDPRSSDQDRYVLLEALMSTRQHLLITWNSRDEHTGECRPAASPVQQWLGRLQHELSDE 737 Query: 763 GDEALNCDESEARVKAHLTCLHTRMP---FDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 + L + + ++ P D ++++ P A S Sbjct: 738 TFQGLCREPAANPLERSNFLSQGSQPPPSCDRRHFEARRWLDKTLAPPPLALALPLHWSS 797 Query: 820 FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 + + L R+ P + + QV R + D E L+ R+ Sbjct: 798 VSLEASAVISSEL----LLRWLIAPQLIWLEQ-FQVTPREWFDPVEDLEALDLDEWHRHG 852 Query: 880 INQQLL-----------NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLA 928 + +Q L NAL++ +A R+ G LP GA + E Q Q L Sbjct: 853 LLKQRLSELLGHLPTDENALLQGSEAGDWKHRYAGQGTLPPGAAATLECERLEQRWQHLQ 912 Query: 929 DRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYC 988 +++ P + ++LA D ++ +P L M+ WL HL C Sbjct: 913 ATLLSM-GPCSTRRLELADGS-----RQMLWAGDTVVVVQPGQLKSRGVMEGWLSHLQVC 966 Query: 989 ASGGNGESRLFLRKDG----------EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVL 1038 A+ + + + + G R+ PL AEQA L L +G+S V Sbjct: 967 ANHTLTSATVVVARCGPAAKKDQFEIALRWQPLPAEQAREQLIALQALACQGLSQCWPVP 1026 Query: 1039 PESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR--- 1095 P SG A+ ++ + F Q++ G V+GE + Q + Sbjct: 1027 PMSGWAYANA-----------NNKLAGRGEEAFRQSWSGGFNVQGERERAEMQLCFGLNC 1075 Query: 1096 -QLTPETMEAIVEQSQRFLLPLFRFN 1120 + + PL Sbjct: 1076 EASELLNSAGFEQANTSLYGPLVEAL 1101 >UniRef50_A5GLW8 Exodeoxyribonuclease V gamma chain n=4 Tax=Synechococcus RepID=A5GLW8_SYNPW Length = 1105 Score = 517 bits (1330), Expect = e-144, Method: Composition-based stats. Identities = 256/1166 (21%), Positives = 442/1166 (37%), Gaps = 107/1166 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 MLR+Y SNR ++L L+ + PFE ++V + ++WL L+ GI+A + Sbjct: 1 MLRIYRSNRAELLAQLLAQELNLNPPG-PFEQVEVVVNTWPTSRWLGERLASFNGISALV 59 Query: 61 DFPLPASFIWDMFVRVL-PEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD-- 117 FP P S + + VL E P E + + + W ++ +LPQL++ E+ LR + + Sbjct: 60 RFPFPGSRLRQLAQAVLSKEPPLEDPWRAERLVWTVIAVLPQLMQCEEAKPLRQWWNNQR 119 Query: 118 ---DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 D+ R+ + L+ + AD D Y +YRP LA W G + L WQ L +AL E Sbjct: 120 TTSDALTREQWLLARQLADAVDDYALYRPQDLAGWLAGDDGDHLPAVLRWQPLLVRALAE 179 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 P Q+ ++ L S LP R+ + G+S L PV + LQAL + Sbjct: 180 RL-----PCEPFGLQVQQAVDQLRSGQAPATPLPKRLRLFGLSNLAPVQIDLLQALAAVM 234 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 ++ L PC W + DG Sbjct: 235 QVELYLLTPCPDLWERSAQRRRRL-----------------------GENWTASPDGTWL 271 Query: 295 VGNP-LLASWGKLGRDYIYLLSD-----LESSQELDAFVDVTPDNLLHNIQSDILELENR 348 + P L A G++G ++ LL L S+ + D F D Q +LE R Sbjct: 272 IEAPKLEAILGRMGGEFQLLLEGSGDCLLSSTDQADLFADPVAMAASEGRQGSLLEQLQR 331 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 +A + D S+ F C P REV+++ D++L + +D TL PRDI Sbjct: 332 QLASSEHFPLQHT-------SADRSLLFMGCAGPWREVQLVRDQILHWMADDSTLQPRDI 384 Query: 409 IVMVADIDSYSPFIQAVFGSAPAD-RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 +VM D++ Y+P + +V A LP+ ++DR + S + +AF++LL L R + Sbjct: 385 LVMTPDVERYAPLLASVLSDQDATGVDLPWRLTDRSQQNSPGLQQAFMTLLQLSAERLTA 444 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 + AL+ P + + + + SG RWG+D + H+ R+ Sbjct: 445 TGLEALMSNPAFLDLQGLEAQEAMDITAALQRSGFRWGLDREERH-----GDDTHSLRWC 499 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 L R L+G + G + L + + LL Q+ W L Q W Sbjct: 500 LDRWLIGLILPDEPGLALGSCA-PAVADLSLQQLERWWPLLDQIAQWIAQLRQSGSCTVW 558 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 + R +L+ F + + I+Q + + + + + +++ L + L Sbjct: 559 VERLRRLLSDLFGDGGAWDWELQAIQQGLETWLIQAGHCELN--LETTVVIAVLEEALSA 616 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + +G + + L PMR+IP +V+ L+G++ +PR GF L+ ++ + GD S Sbjct: 617 DSGRFGHRSGAMTVSALEPMRAIPHRVIVLMGLDAASFPRTRERPGFHLLERQRRLGDPS 676 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 D DRY+ LEAL+S++Q L IS+ R + P VQ+ ++ + Q + Sbjct: 677 STDQDRYVLLEALLSSRQHLLISWSSRDERRGDALPPCPPVQQWLNLLRQELSEEAMAQV 736 Query: 768 NCDESEARVKAHLTCLHTRMPF--DPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 + + A D + Q + + P + G A P Sbjct: 737 LIEPPANPLDAANFIPAKTHALSCDRRLLQARQCLDDPQGRAPGHAPLGLALPIHWPPEA 796 Query: 826 FTLPETVP------LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 P +E L+R+ P RA+ + R + + D P L + Sbjct: 797 PPPPAHATTLNSDQVEQLERWLQAPQRAWLRER-GIEAGEWCDAVEDRAPLALPERTLRA 855 Query: 880 INQQLLNALVEQDDAE-----------RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLA 928 + + L +++ R + G LP GA G + Q + L Sbjct: 856 LITERLRDELDRLKTHPEARWDVTRSGEWIRWSQGRGLLPPGAGGALDDIRLEQRWKNLQ 915 Query: 929 DRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYC 988 + + Q + ++ + + + S L ++ WL+HL+ Sbjct: 916 TTLFSLGSLQQPPRWE------RLATPPLPMAGETAVLISASKLQARSVLEGWLKHLLNQ 969 Query: 989 ASGGNGESRLFLRKDGE---------WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLP 1039 +G + + R + R+ P+ ++QA LS L EG + P Sbjct: 970 RAGRAAPTVVICRGESSSKAETFSIAMRWLPMESQQADGLLSDLFALAEEGRRICWPIPP 1029 Query: 1040 ESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTP 1099 ESG A ++ A F + G + E + Q + Sbjct: 1030 ESGLARAVALAKGRDV-----------ADRAFSACWHGGIKRWAERERSDLQACFGNGCD 1078 Query: 1100 ----ETMEAIVEQSQRFLLPLFRFNQ 1121 + PL + Sbjct: 1079 AERLLSSPGFDSAFDSLYAPLLEARR 1104 >UniRef50_A3ETY6 Putative exodeoxyribonuclease V, gamma subunit n=2 Tax=Leptospirillum sp. Group II RepID=A3ETY6_9BACT Length = 1095 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 249/1177 (21%), Positives = 436/1177 (37%), Gaps = 152/1177 (12%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML ++ SNR++ L + ++ + P+ P IL Q+ + +WL L+ G+A NI Sbjct: 1 MLVLHVSNRMERLTDQLFSVIRDDPPP-PWSPVTILPQNPTIGRWLTYRLADVQGVAMNI 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 PLP ++I D + F + ++ +L+ +LP L + F+ RHYL + Sbjct: 60 ATPLPGAWIRDFLETGFGRSGQVVHFERNALFLRLLRILPALRDDPVFSEFRHYLGEGDP 119 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 R+L LS + ++LFD+ ++YRP+WL WE E +W A LW+ + Sbjct: 120 SRRLVSLSDELSELFDRAMLYRPEWLTSWE------DFPEDLSWPAVLWRNVAGK----- 168 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGK--HIEIHL 238 H A L F + LP R+F+ G+S + P L +G+ ++H Sbjct: 169 DHPAHFARLLHEFHSLPVLDSLWQEALPDRLFLFGLSGIAPATLDIFFRIGRETSCQVHF 228 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 F NP YW D+ + + D G+P Sbjct: 229 FFLNPTDRYWADMVSLRSWEHMEEELKP-------------------------YFDPGHP 263 Query: 299 LLASWGKLGRDYIYLLSDLESSQE-----LDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 LLA G+ RD L + ++ + F + L +Q + ++ A Sbjct: 264 LLAFLGRTARDLHKKLEEGIRPEDPVADIRECFEEPEGTTTLSRLQRSLFRMDAAAEFLE 323 Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA 413 + P D S+ S REVE L D LL P L D++++ Sbjct: 324 RL-------------PDDGSLRIVSSPSVVREVETLRDFLLDRFLAQPDLRLEDVVILAP 370 Query: 414 DIDSYSPFIQAVFGSAPADRY-----LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 + + Y+ I+AVF + L +SDR + + + LL LP Sbjct: 371 ETELYAGTIRAVFEATGESGRAGEPVLSVTVSDRPPF-EAALADVLVGLLRLPVFPLTLS 429 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 V LL + RF + + L + + +G RWG+D + HT + + Sbjct: 430 FVQRLLSFQTVLDRFSLDRKMASELLEALARAGFRWGVDKQDRTR---DEPEDHTLDWAV 486 Query: 529 TRMLLGYAME-SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 +R+L GY QG V P+ E G L LL WR L+ L W Sbjct: 487 SRILEGYCTGIEEQGLVFPVSPFVLPDDPQGEKAGILFRLLDLFRSWRDRLSGRHALSAW 546 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 +L+ FF+ D + + + + Q + + + + + ++ + L++R+ + Sbjct: 547 AESVSALLSDFFVLDPDRDRDLFALGQSLRELCRDIHDV---EDMDCMMVTEMLSRRIFR 603 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 RF +G + ++P+RSIPF++VCLLGM + +PR FD + + P+ DRS Sbjct: 604 TTWRDRFFSGGITFGRMVPLRSIPFRIVCLLGMGESAFPRNDVAQSFDFLRESPRPLDRS 663 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 R+DD +LFLE L+SA+ L+ISY+G D + PS V++L++ + + Sbjct: 664 VREDDLHLFLEILLSARSSLWISYVGGEGGDGTTGLPSPPVRQLLETLREPFPPEKKG-- 721 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNY--QPGERQSYAREWLPAASQAGKAHSEFVQ--- 822 L PFDP + + G S++ Sbjct: 722 ----------QGLFREVPSDPFDPSCFSREAGSWGSFSSSRAGIVRSRSTRTDSSPSFFV 771 Query: 823 -----------PLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI 871 P + L LQ F+ +P + L + E + D EPF+ Sbjct: 772 PKKGRLVLPKGPEDRGSGRRISLSRLQSFYRNPPFYQAKNVLNLAVAGERPLLLDEEPFL 831 Query: 872 LEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV 931 L+ + P+ G + E Q ++ ++ +R+ Sbjct: 832 LDP-----------------------SQEMADPAQNPWPPVGPLQREQQTRKRRERRERL 868 Query: 932 IACRQPGQS-----MEIDLACNGVQITGWLPQVQPDGLLRWR--PSLLSVAQGMQLWLEH 984 + + Q L G + G L + GL+ P L ++++L H Sbjct: 869 LGGFEGLQEDHTETRRFSLGIGGSLLFGTLSLYRETGLIVQDPFPWALRPPDLLRVFLAH 928 Query: 985 LVYCASGGNGESRLFLRKDGEWR---------FPPLAAEQALHYLSQLIEGYREGMSAPL 1035 L + + L ++ E+A L + YR + Sbjct: 929 LAGSLAFSFYRGTVLLNLAKDFPRTDSTDRPVLWSSEPEEATRLLRPYLVLYRRFRTRTF 988 Query: 1036 LVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQ------------AYEGNMMVRG 1083 +P A+ Q D + A+T + Q +++ Sbjct: 989 PFVPAVSLAYALE-QRNQRGRGPDPRKAIAAAQTAWRQLDPWRTDHGQKNSWKSPFRKDP 1047 Query: 1084 EGDDIWYQRLWRQLTPETMEA--IVEQSQRFLLPLFR 1118 + +Y L+ + ++ +Q+ P+ Sbjct: 1048 RRREGFYPHLFFDPEGDWIKDPFFGLLAQKLWNPILD 1084 >UniRef50_Q3AJ30 Exodeoxyribonuclease V, gamma subunit n=5 Tax=Synechococcus RepID=Q3AJ30_SYNSC Length = 1081 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 260/1154 (22%), Positives = 422/1154 (36%), Gaps = 106/1154 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML VY SNR + L L+ + ++ P E ++V + ++WL L+ GI++ + Sbjct: 1 MLTVYRSNRAEFLARLLSRQLIEQQPG-PLETVEVMVNTWPTSRWLGEQLATANGISSLV 59 Query: 61 DFPLPASFIWDMFVRVLPEIP-KESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 FP P S + + +VL ++ + + W ++ LLP+LLE+ LR +L Sbjct: 60 RFPFPGSRLRQLVRQVLHLPAQEDDPWRAGQLVWAVLELLPELLEQPVAQPLRVWLAQRE 119 Query: 120 DK-----RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 R +QL+ AD D Y +YRPD L QW+ + WQ LW+ L + Sbjct: 120 GTASGLTRDRWQLARSIADAMDDYALYRPDQLEQWKQPRPDDD------WQPVLWRLLAQ 173 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 PR + +E L P LP R+ + GISAL PV + +QAL + Sbjct: 174 RL-----PRAPFGLQVREAVECLRRGDVDPALLPERLRLFGISALAPVQVDLIQALSGLL 228 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 + + PC W L DG Sbjct: 229 AVEIYLLTPCPDLWQRCGSRRASL-----------------------GDEWLIPPDGGWL 265 Query: 295 VGNPLL-ASWGKLGRDYIYLLS-----DLESSQELDAFVDVTPDNLLHNIQSDILELENR 348 P L A G++G ++ LL L +E D F Q Sbjct: 266 AEAPRLEAVLGRMGAEFQQLLEGSGEAQLGERREGDLFAGSLQIAAAEERQP------TL 319 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 + S + D S+ F P REV+++ DR+L L DP L PRD+ Sbjct: 320 LDQLQQQLVDAESIAELNRSSDDQSLLFQAAPGPWREVQLVRDRILQWLAADPDLEPRDV 379 Query: 409 IVMVADIDSYSPFIQAVFGS-APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 +VM I+ Y+P + +VF A LP+ ++DR + S + A +LL L +R + Sbjct: 380 LVMTPQIERYAPLLSSVFNDTAAFGVDLPWRLTDRSQQSSPGLSMAMFTLLELAATRLTA 439 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 + LL P L + +T E + Q + SG RWG+D H+ R+ Sbjct: 440 TGLERLLANPALQGQQGLTPEEAVLITQTLQRSGFRWGLDARER-----GGDEVHSLRWC 494 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 L R LLG + G + + L + + +LL ++ L + RP W Sbjct: 495 LDRWLLGLVLPVEPGLAPAGAAPFQQE-LDPDRLVRWWTLLDRVARMLDRLREPRPCHGW 553 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 + + + +L F + + ++ + L + L Sbjct: 554 VELLQSLLQELFAEGGAWTDEAQSWAAALEEWRLRAHDCPLD--LDAAVALEVLQEALSV 611 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + +G + I L PMR+IP KVV L+G++ +PR GF L+ Q+ + GD Sbjct: 612 DSGRFGHRSGALTISALEPMRAIPHKVVILMGLDSADFPRPSRRPGFHLLEQQRRLGDPR 671 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 D DRY+ LEAL+SA++ L IS+ GR + + P+ V++ + + + G Sbjct: 672 SSDQDRYVLLEALMSARRHLLISWCGRLERTGEPQPPAAPVEQWLSVLQEQLQRAGASTE 731 Query: 768 NCDESEARVKAHLTCLHTRMPFD--------PQNYQPGERQSYAREWLPAASQAGKAHSE 819 + A P + + L AS ++ Sbjct: 732 GLLVTPAANPLSRENFRPEAPLSCDRRQLEARRCLDAAPASVPNPQGLAWASLWQPEIND 791 Query: 820 FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 + E L + P +A+ Q R + + D E LEGL RY Sbjct: 792 DEAEGRDGDDLALDPEALLAWLQQPQKAWLQAR-GLRPGEGIEAVEDLEALELEGLQRYL 850 Query: 880 INQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ 939 + L A G LP GA + E Q Q L ++ + + Sbjct: 851 LLNHELEEQFILGSAPDWTASLAGQGVLPAGAGAALEQEELQQRWQALQRQLASLGPCRR 910 Query: 940 SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNG----- 994 + + LA + + D + +P +L+ A M+ WL+HL+ CA G Sbjct: 911 EVPV-LAGLPMPL-----LYAGDTQVVVQPGMLTAAAVMRGWLQHLLLCAEGSAPAAGSA 964 Query: 995 ---ESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYD 1051 S + R+ L +A L QL R+G+ V P+SG + Sbjct: 965 VVARSTRVAGAEVHVRWSVLPTVEAEDQLQQLARLARQGLERCWPVPPKSGWQMVAKERR 1024 Query: 1052 AQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ---LTPETMEA-IVE 1107 + F + ++ EG Q + +A + Sbjct: 1025 KPGEGQ-----------QDFRKTWQD------EGATPLMQLCFGSDVAAEQLMDQAGFQQ 1067 Query: 1108 QSQRFLLPLFRFNQ 1121 Q PL + Sbjct: 1068 ACQLLYGPLMANLR 1081 >UniRef50_Q05XZ7 Possible exodeoxyribonuclease V gamma chain n=1 Tax=Synechococcus sp. RS9916 RepID=Q05XZ7_9SYNE Length = 1078 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 254/1150 (22%), Positives = 426/1150 (37%), Gaps = 105/1150 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWL--QMTLSQKFGIAA 58 ML +Y SNR +VL ++ + E ++V + ++WL Q+ L+ GI A Sbjct: 1 MLTLYRSNRSEVLADVLAANLSLHPPG-VLEEAQVVVNTWPTSRWLGEQLALANPSGITA 59 Query: 59 NIDFPLPASFIWDMFVRVLPEIPK---ESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYL 115 N+ FP P S + +L + + Q++ W L+ LLP+LL+ L+H+L Sbjct: 60 NLRFPFPTSLLRHTVDGLLEQQSSGGGADPWRAQNLVWPLLELLPELLDHPASAPLQHWL 119 Query: 116 TDDSD------KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLW 169 L+QL+ AD D Y +YRP L W G + G + Sbjct: 120 NTRKSAALEVLDPPLWQLARAIADAIDDYSLYRPAMLEAWLKGQATDARGTPLSPTMLW- 178 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 + + ++ I L+ + + G+S+L PV ++ LQA Sbjct: 179 QQQLMQQLHSRLGCLPFGMRARQLIRRLQEGWRPERPPQPPLRLFGLSSLAPVQVELLQA 238 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L I L PC W S Q Sbjct: 239 LSCLRSIELYLLTPCPELWQR----------------------------QSSIESQAPLD 270 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLS-----DLESSQELDAFVDVTPDNLLHNIQSDILE 344 + + A +G+LG ++ LL L S + LD F + +LE Sbjct: 271 EEWLLTVPSVEARFGRLGAEFQQLLEGSGETQLGSWRALDPFFFPATTASSQGKEPTLLE 330 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 + + P D S+ FH C R+++VL D++L +L D +L Sbjct: 331 QLQEHLVHGTPTDLL------PRTEDDQSLQFHACPGRLRQLQVLRDQILQLLANDDSLE 384 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPAD-RYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 PRDI+VM +++++P + AVFG A LP+ ++DR + + + + LL+L Sbjct: 385 PRDILVMTPQVEAFAPLVSAVFGDNDATGVRLPWRLTDRSQQSEAGISQGVLQLLALGGE 444 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 R + + +L L + + + Q + ++G RWG+D + H+ Sbjct: 445 RLTASALETVLANAPLLRAHQLEPDEAEDITQSLQQAGFRWGLDSRDR-----GGDPTHS 499 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + + R++LG G G E G LL QL + L+ R Sbjct: 500 LAWAIDRLVLGVVYPETPGLALENTAPMALPG-SLEQQGRWLGLLRQLQRSLQWLSHSRS 558 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 ++ W+ R L A F + + I + + ++ + LA+ Sbjct: 559 VQAWVEGLRPQLMALFADGGDWAWELQTIHSVLTDWGE--VAGNSSLELSAPVVGEVLAE 616 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 RL + +G + I L PMR+IP KV+ L+G++ G +PRQ GF LM Q+ Sbjct: 617 RLSEGSGRFGHRSGALTISALEPMRAIPHKVLVLMGLDAGAFPRQRQRPGFHLMEQQRLL 676 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 GD S D DRY+ LEAL+SA+Q L +S+ R + S V++ ID + Q Sbjct: 677 GDPSSGDQDRYVLLEALLSARQHLLVSWSCRDERTGEPLEASTPVRQWIDLLPQVPVREH 736 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS---QAGKAHSEF 820 + +A +R R+ L A + AG A S Sbjct: 737 AANALERSNFLPSEAWPP------------ASCDQRLLQVRQHLDAGTIGGTAGLAFSIT 784 Query: 821 VQPLPFTLPETVPL-ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 P + + L + P + + + L + R ++ + D E L+ R Sbjct: 785 PHKSPDGPALPLSAWDDLISWVTAPQKQWLEQ-LGLRPREHENAVLDLEDLSLDERQRSA 843 Query: 880 INQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ 939 + +Q L E++ R G LP + G + Q L+ + + + + Sbjct: 844 LLRQELGRDQEENAEPDWLALDRGRGQLPPHSAGALEAHQLEQRWTSLSTCLSSLGEERR 903 Query: 940 SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLF 999 ++ Q ++ D L+ + Q QLWLE L+ A+G S + Sbjct: 904 D---AVSMGPWQ---AELSLRDDQLVLVHTARPRSPQRQQLWLELLLATAAGSKLRSAVL 957 Query: 1000 LRKDGEW-----RFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQN 1054 + +DG R P +Q L Q + + PE+G A+ Sbjct: 958 VGRDGHRFRVLERISPPTRDQCTALLDQHQAWREQYQQRCWPLPPETGWAFA-------- 1009 Query: 1055 DAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR---QLTPETMEAIVEQSQR 1111 K +K A+EGN ++ GE D Q + L + + Sbjct: 1010 -----VGEAKGKGWSKARDAWEGNAVLAGERLDAVQQLCFGSDLPLGDLLTDDAQALALT 1064 Query: 1112 FLLPLFRFNQ 1121 PL Q Sbjct: 1065 LHGPLLERRQ 1074 >UniRef50_A6W6P1 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W6P1_KINRD Length = 1158 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 262/1218 (21%), Positives = 450/1218 (36%), Gaps = 169/1218 (13%) Query: 1 MLRVYHSNRLDVLEALMEFIVER-ERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG---- 55 ML V+ S + L + ++ DPF P+++ V + G +W+ LS G Sbjct: 1 MLHVHRSESANTLVTALAGLLRDPAPGADPFAPDVLAVGARGTERWIAQRLSHHLGAGDP 60 Query: 56 --------IAANIDFPLPASFIWDMFVRVLPEIP-----KESAFNKQSMSWKLMTLLPQL 102 I A +D PA + + L + S++W ++ +L ++ Sbjct: 61 AAGGGDDGICARVDTSSPAHLLDGVLAAALERTRPGTGDAVERWAPSSLTWDVLEVLDEI 120 Query: 103 L---------EREDFTLLRHYLTDDSDKRKLFQLSSKAA-------------DLFDQYLV 140 R +F LLRH+L LF +Y Sbjct: 121 APADGGPAPDGRPEFALLRHHLRHHPGDDGPGGPGGPGTPPVRRTAAAARVAGLFARYGA 180 Query: 141 YRPDWLAQWETGHLVEG---LGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETL 197 RP LA W G L WQ +++A+ E A L L Sbjct: 181 ARPQLLADWAAGRDDAPGAPLPADLRWQPEVFRAVRERVGLPA-----PAELLDDACAAL 235 Query: 198 ESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYL 257 + L R+ + ++ L L+ L AL +H E+HLL +P W Sbjct: 236 RT-DPALSDLGPRLAVFLVTRLATSRLRVLSALAEHREVHLLLQHPSPALWD-------- 286 Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL 317 ++ + +PLL S + R+ L+ Sbjct: 287 ---------------ATAAALRTDPGPRRAAWAAHAPGRHPLLRSMARDVRELQVRLAHA 331 Query: 318 ESSQ-ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITF 376 ++ LL +Q+ + A DP D S+ Sbjct: 332 APGHTDVHHPAPEPAPTLLGTLQAALARDAEPA---------------PGPDPGDRSVQV 376 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG-SAPADRYL 435 H CH R+VEVL + +L +L+ DPTL PRD++V D+++++P + A F + L Sbjct: 377 HACHGRARQVEVLREVVLGLLDADPTLQPRDVLVACPDVETFAPLVSAAFATDSHPGGGL 436 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 ++DR A +++P+L + LL L SR + +VL L + RFD+ +E L LR+ Sbjct: 437 RVQVADRSALRTNPLLGLAVRLLGLAQSRAGATEVLDLAAAAPVRRRFDLDDEDLEQLRE 496 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES-----------AQGEW 544 W +G+ WG+ + +L + Q TWR GL R+L+G A+ G Sbjct: 497 WTVAAGVHWGLSARHRGAWQLGSLDQGTWRAGLDRLLVGVAVGGAVEDDLVGRTGEDGLL 556 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 +V+P + +L G A LL +L+ L + W D + E Sbjct: 557 GAVVPLADVESSRIDLAGRFAELLDRLDAAVTRLQGRHGVAAWCDTLLDAVLDLADTAPE 616 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 + + ++ + + A V L+ + +++R F G + +CT Sbjct: 617 DAWQVAQLRRELGVVAHDAARA-GTARVGLTDVAATISERFAAHPQRANFRTGALTVCTP 675 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 P+R++P +VVCLLGM+DG +PR P D++++ P GDR R +DR + L+ + SA+ Sbjct: 676 APVRAVPHRVVCLLGMDDGAFPRAGGPDADDVLARDPHVGDRDPRGEDRQVLLDLVRSAR 735 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 L ++Y GR ++ + P+V V E++D + +H V+A + H Sbjct: 736 DALVVTYSGRDVRTGAVLPPAVPVGEVLDALEAAH--------------PGVRARIEVHH 781 Query: 785 TRMPFDPQNYQPGERQSYAR---------EWLPAASQAGKAHSEFVQPLPFTLPETVPLE 835 P D +N+ PG + + LP + L+ Sbjct: 782 PLQPTDRRNFTPGALGTDGPFSHDGTAFSGADAGHREPAPVPPFLPAALPPAPAADLDLD 841 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE 895 TL +F HP R F + RL V T + E D P L+ L ++ + + L A + A Sbjct: 842 TLVQFLQHPARGFLRQRLDVASATREEEPDDALPVQLDALQKWAVGDRALAARLRGVAAP 901 Query: 896 RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC-RQPGQSMEIDLAC-----NG 949 + R A G LP G G + +A P +S++++L Sbjct: 902 EVVRLEGARGGLPPGPLGVAVLREVGPVVDAIAGVAAEFDTAPPRSVDVELDLDVPGVGQ 961 Query: 950 VQITGWLPQVQPDG---------LLRWRPSLLSVAQGMQLWLEHLVYCASGGNGE-SRLF 999 +++TG + V+P + S + Q ++ W+E L A+ E + Sbjct: 962 LRLTGNVRGVRPVRGGGRATGEVAVTTVYSRIKGKQTLRAWVELLALSAAHPGTEFRTVL 1021 Query: 1000 LRKD-----GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQN 1054 + + G P+ ++ A L L+E G+ PL + ++ AW + + + Sbjct: 1022 VGRGDRGSTGLLTLGPVRSDAARDLLVDLLELRAVGLRFPLPLPVDTAAAWAQEAWRGR- 1080 Query: 1055 DAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR---------------QLTP 1099 +A+ + E +W L P Sbjct: 1081 --------APDACLRAARRAWTSDFSFDKEDRQEENVTVWGAERPVEHLVRWEPPTTLPP 1132 Query: 1100 ETMEAIVEQSQRFLLPLF 1117 +R PL Sbjct: 1133 GVPTTFEGLVRRVWEPLL 1150 >UniRef50_Q6FF17 Exonuclease V, gamma chain n=3 Tax=Acinetobacter RepID=Q6FF17_ACIAD Length = 1221 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 261/1242 (21%), Positives = 493/1242 (39%), Gaps = 147/1242 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVER--ERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 + V S R+DVL + V + + D + +V S + QWL LS+ GI AN Sbjct: 3 IHVIQSQRIDVLLQGVWQSVHQPTRQPFDVLATQHFIVPSPAVEQWLTEKLSELQGITAN 62 Query: 60 IDFPL-PASFIWDMFVRVLPEIPKE---SAFNKQSMSWKLMTLLPQLL---------ERE 106 F F W + +VL E + + + + W++ L + + Sbjct: 63 YLFHQRIRGFQWYAYQQVLSEHKDDVRKANIPRLILKWRVYQALYDFIQPDQILITQDHP 122 Query: 107 DFTLLRHYL-----------TDDSDKRKLFQLSSKAADLFDQYLVYRPD----------- 144 ++++ ++ L+ ++ + + LF Y++YR Sbjct: 123 AYSIIARIYDSADRLENGFEKQLKKQKMLYWVAEQVSQLFSNYMIYRGHCQKNCAGNCGC 182 Query: 145 ---WLAQWETGHLVE------------------GLGEAQAWQAPLWKALVEYTHQLGQPR 183 WL+ W ++ E +AWQ LW Y HQ Sbjct: 183 ASNWLSAWGENRELDIEQLIVQGNKEISAFQLQQAQELEAWQRWLWHR---YFHQDFLDI 239 Query: 184 WHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNP 243 + +L+ + +E ++ LP ++ + + LPP LQ L+ LG+++++ +L NP Sbjct: 240 QNIDDLFWQVLEQPQTRDIALKRLPKQIVMFTLLDLPPSQLQFLRRLGQYLDVLILHYNP 299 Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFE---DRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 + YW D DP + + R ++ E L + ++ +PLL Sbjct: 300 SQEYWADSVDPLWKQRYDVRVKQRFIEKNPAATDVDIAQFFEQFTLHFNAEARESRHPLL 359 Query: 301 ASWGKLGRDYIYLLSDLESSQE---LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 GK RD+ LL++L + +E +DAFVD PD LL +QSDIL L Sbjct: 360 TRLGKQARDHFSLLANLSTGEEGRWVDAFVDDFPDTLLGQVQSDILNLAEPQA------- 412 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT---LTPRDIIVMVAD 414 + L+P D SI FHVCHS R++EVL D+L+ L ++ P DI+V+V + Sbjct: 413 -----GRYTLEPSDESIRFHVCHSSLRQLEVLRDQLIHWLSQNDDASVRRPNDILVVVPN 467 Query: 415 IDSYSPFIQAVFGSAPADRYL--PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 I P I++VF + P+D + P IS A + ++L R +D Sbjct: 468 IKEIEPLIRSVFPATPSDDGVFLPIKISGVVQLDVMNAWRAVLGRMTLLQGRLSYDDFAD 527 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA--TGQHTWRFGLTR 530 L +P +D+ + ++ + + +G + G D ++++ +++++F L R Sbjct: 528 WLSLPATQVCYDLEDSQIKRMLALLAGAGFKRGFDIHHLQQSLSAEDHDDRYSFKFALDR 587 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL-----AQERPLE 585 + LG A+ +Q VL Y + EL+G L + ++ R + + +E Sbjct: 588 LALGIAIPEH-TLFQGVLSYSGVTPDDFELIGKLIQIYQDIDARRNWVLAHEQGTQHSVE 646 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI-------IAEGLGAQYGDAVPLSLLR 638 +WL + + F I ++ + + + A+PL + Sbjct: 647 DWLKILMQDVIEFEQAGVVALKTAREIIKKQERMVTLASFYADKDAHTLRQIALPLPYIL 706 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM- 697 DE+ + L+ + +Q G + + +R +P+++V +L ++ G +P + + + FDLM Sbjct: 707 DEIQRTLEHQS-AQAEPTGQITFSQIGQIRPLPYRLVVMLNLDTGRFPNRDSHIPFDLMD 765 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 + + + GDRSR +DD+ FL+A++ AQQ L++ Y G + D R PS ++QE D++ Sbjct: 766 ALRQQLGDRSRLEDDQGAFLDAVLLAQQALWLFYNGFDLNDGEVREPSSILQEFRDHLAL 825 Query: 758 SHYLPGDEALNCDESEARVKAH--------------LTCLHTRMPFDPQNYQPGERQ-SY 802 A + D + L C+H PFDP + Y Sbjct: 826 IVAPAEQIAKHEDSNLTIQMQQQQFKLLDIPNQLWPLYCVHPLQPFDPLGFGNLPVAKRY 885 Query: 803 AREWLPAASQAGKAH---SEFVQPLPFTLPETVPLETLQRFWAH---PVRAFFQMRLQVN 856 +W A +A +V + + + + Q++ A P R + + L V Sbjct: 886 QDQWYQVAQSIQEASAILQPWVNMVYTQPQQELRVLDSQQWMADVTFPARLYLKN-LGVE 944 Query: 857 FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 + + EP L+GL RY I L + + L LP G Sbjct: 945 NLAMTTLLDQNEPLFLDGLGRYAIRN-FLQKQEQTTTPDTLLD------QLPVGKIKHSA 997 Query: 917 WETQCQEMQQLADRVIACRQPG--QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSV 974 W+ E ++L +R+ + + + + +P+ + S Sbjct: 998 WQQSLAEQERLLERLHHYTTQPTATTHHVWRVSKTLHLNIIMPEHDVQDWVSLEASSARA 1057 Query: 975 AQGMQLWLEHLVYCAS-----GGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYRE 1029 + ++WLE+L++ + G R+ + D +++ QA YL+Q ++ ++ Sbjct: 1058 KRIAKVWLEYLLWLSYLNEGDAGQRRRRIVVFSDQTVICEGVSSIQARDYLTQWLKMWQV 1117 Query: 1030 GMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMV----RGEG 1085 + P+++ L+ D ++K L+ ++ + Sbjct: 1118 ASTQPVVLPAALILQPLEKAKQYHWVQQSDQFQLVEKDLLNILKEWQDPKAYMQIDTSQL 1177 Query: 1086 DDIWYQRLW------RQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 + Y W + T +A+ S P+F++ + Sbjct: 1178 ESSQYHLDWSFILQQQDATALLKDALQRYSYDLYAPIFQYLR 1219 >UniRef50_B2I2P5 Exonuclease V gamma subunit n=14 Tax=Acinetobacter RepID=B2I2P5_ACIBC Length = 1211 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 262/1234 (21%), Positives = 486/1234 (39%), Gaps = 139/1234 (11%) Query: 2 LRVYHSNRLDVLEA--LMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 + V S R+DVL L + + +V S + QWL L+++ G++AN Sbjct: 3 IHVIQSQRIDVLLQGVLASTSQPSTHPLQVLKAQHFIVPSPAIEQWLIQKLAEQQGMSAN 62 Query: 60 IDFPLPAS-FIWDMFVRVL---PEIPKESAFNKQSMSWKLMTLLPQLLE---------RE 106 F F W + +VL E +++ + W++ L + ++ Sbjct: 63 YQFHQRVRGFQWYAYQQVLTAHKEQVRKANIPRLIFKWRVHQALQEFIQPDVMSIDSSHP 122 Query: 107 DFTLLRHYL-----------TDDSDKRKLFQLSSKAADLFDQYLVYRPD----------- 144 ++++ ++ L+ ++ + ADLF Y+VYR Sbjct: 123 LHSIVQRIYDSADRLEQGIEKQLKKQKMLYWVAEQVADLFSNYMVYRGQCQRGCENMCTC 182 Query: 145 ---WLAQWETGHLVE------------------GLGEAQAWQAPLWKALVEYTHQLGQPR 183 WLA W G ++ E + WQ LW+ ++ H+ Sbjct: 183 PNNWLAAWGQGRSLDIEKYIAHKDKEVSAFTLQQTQELERWQRWLWQ---QHFHEDFMQM 239 Query: 184 WHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNP 243 L+ + +E E LP ++ I + LPP LQ L+ LG++I++ +L NP Sbjct: 240 QQIDELFWQELEHPERQKKALSRLPQQIVIFTLLDLPPSQLQFLRRLGQYIDVLILHYNP 299 Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL---FRDSENAGQLFNSDGEQDVGNPLL 300 + YW D DP + + + D N L + ++ +PLL Sbjct: 300 SQEYWADSVDPLWKQRYDLGVKERFIAKNPQATDAEIADFFNKFTLNFNAEARESRHPLL 359 Query: 301 ASWGKLGRDYIYLLSDLESSQE---LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 GK RD+ LLS+L + +E +DAFVD P++LL +QSDIL L + Sbjct: 360 TRLGKQARDHFSLLSNLSTGEEGKWVDAFVDDFPESLLGKVQSDILHLVEPQAKQYELA- 418 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE--DPTLTPRDIIVMVADI 415 P D SI HVCHS R++EVL ++L+ L + + P DI+V+V ++ Sbjct: 419 -----------PNDDSIQIHVCHSTLRQLEVLKEQLIGWLAKPHEQPRRPNDILVLVPNL 467 Query: 416 DSYSPFIQAVFGSAPADRYL--PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 P I++VF + ++ + P I+ + + A I + L RF ++ Sbjct: 468 AEVEPLIRSVFPATATEQGVHLPVKIAGIASLDALNAWRAVIGRIHLMQGRFSFDEFADW 527 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG--QHTWRFGLTRM 531 L + R+ + + + + ++G + G+D ++++ +++++F L R+ Sbjct: 528 LGLHATQQRYALEYAQVERILNLLADAGFKRGLDAEHLKRSLCDGDDDYRYSFKFALERL 587 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL-----AQERPLEE 586 LG A+ + VL Y + EL+G L + LN R L + +E Sbjct: 588 ALGIAIPEHAT-FNQVLSYAKVQPGDFELIGTLIQIYQDLNERRDWLIMHEQKKSHTVEY 646 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD-------AVPLSLLRD 639 WL + F I ++ + ++ + +PL + D Sbjct: 647 WLQTLSQDIIEFEQAGVTALKTAREIVKKQERMLTLASYYAETETGTLRKITLPLPYILD 706 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM-S 698 E+ + L+ + +Q G + + +R +P++++ +L ++ G +P + + FDLM + Sbjct: 707 EIQRTLENQT-AQAEPTGQITFAQIGQIRPLPYRLIVMLNLDAGQFPNRDTHVPFDLMDA 765 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 + + GDRSR +DD+ FL+AL+ AQ+ L++ Y G + D R PS ++QE +++ Sbjct: 766 LRQQLGDRSRLEDDQGAFLDALLLAQENLWLFYNGFDVNDGEVRDPSSILQEFREHLALI 825 Query: 759 HYLPGDEALNCDESEARVK---AHLTCLHTRMPFDPQNYQPGERQ-SYAREWLPAASQAG 814 + + L LH PFDP+ + R Y W A Q Sbjct: 826 VKPEPNAPDREVIEGIEIPTQLKQLYHLHYLQPFDPKGFMAENRYIRYQDHWFNVAMQIQ 885 Query: 815 KAH----SEFVQPLPFTLPETVPLE--TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTE 868 +A P +P+ + L+ + P R + + L V S + E Sbjct: 886 QASGVLKPWANISYPLEIPDMLVLDSHQWIQDVTFPARLYLK-TLGVENLGNVSVLDQNE 944 Query: 869 PFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLA 928 P +L+GL RY I L +Q E L LP G W+ E + L Sbjct: 945 PLLLDGLGRYTIRH-FLQQNEQQAQPEVLLD------QLPVGKVQYSAWQQGIFEQECLL 997 Query: 929 DRVIACRQP--GQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV 986 +R+ + + + + +P+ + + S + ++WLE+L+ Sbjct: 998 ERLHHYAPAVTQTTQRVWRIAKQLHMNITVPKSETQDWVSMEASSARAKRRAKVWLEYLL 1057 Query: 987 YCA-----SGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSA-------P 1034 + A S G R+ + D +++EQA YL + +R Sbjct: 1058 WLAYLNEGSAGTERRRIVVFSDQTVICKGISSEQARQYLQPWFKIWRYAQQQPLVLPAAL 1117 Query: 1035 LLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQ--AYEGNMMVRGEGDDIW--Y 1090 LL E A+ + + + D+ + + + + + M + E + + Sbjct: 1118 LLKPLEKAKAY-QWETTNPTEKIKLDEKSYAELLKYWNETGTFTSIDMTQNEACKLHQDW 1176 Query: 1091 QRLWRQLT--PETMEAIVEQSQRFLLPLFRFNQS 1122 + + ++ A E + P+F+F S Sbjct: 1177 RFILQEQDAQALLQHACDEFAYDLYHPVFQFQHS 1210 >UniRef50_D0SSR5 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SSR5_ACILW Length = 1234 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 271/1257 (21%), Positives = 481/1257 (38%), Gaps = 165/1257 (13%) Query: 2 LRVYHSNRLDVLEALMEFIVERER--LDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 + V S R+DVL M IV + + + +V S + WL +++K GI+AN Sbjct: 3 IHVIQSQRIDVLLDSMLRIVNQTARNPFEVLQTRHFIVPSPAVETWLTQKIAEKKGISAN 62 Query: 60 IDFPL-PASFIWDMFVRVLP-----EIPKESAFNKQSMSWKLMTLLPQLL---------E 104 F +F W + VL E +E+ + + W++ L + + + Sbjct: 63 TQFHHRIRAFQWTSYQWVLNAPKEVEQVREANIPRIIIKWRVFQALRKCILPEQIPLDVD 122 Query: 105 REDFTLLRHYL-----------TDDSDKRKLFQLSSKAADLFDQYLVYR----------- 142 +++++ + L+ ++ + + LF Y+ YR Sbjct: 123 HPLYSIVKRIYDSADRLEQGTEKQLKKQSMLYWVAEQVSRLFSHYMDYRGYCARNCPPNN 182 Query: 143 ----PDWLAQWETGHLVE------------------------GLGEAQAWQAPLWKALVE 174 +WL W ++ E +AWQ LW+ + + Sbjct: 183 CSCPSNWLEAWGQDIALDIEQMIYSPKDENGHEMQVADFVKIQARELEAWQRWLWQHVFQ 242 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 LY +E E+ LP+++ + + LPP L L+ L ++I Sbjct: 243 D---DYAKILEIERLYWDRLENAETRAQALKRLPAQIVVFSLLELPPSQLDFLRRLSQYI 299 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG-------QLF 287 +I++ NP + YW D DP + A+ ++ + E R +A QL Sbjct: 300 DIYIFHFNPSQEYWADSVDPDWKARFDLQREERFIQRFEKTRQRKPNDAEIKDFRIKQLN 359 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE---LDAFVDVTPDNLLHNIQSDILE 344 + +++ +PLL +GK RD+ LLS L S +E D FVD D LL IQSDIL Sbjct: 360 FNAEDRESRHPLLTRFGKQARDHFSLLSKLSSGEEGLWADVFVDEYQDRLLAKIQSDILY 419 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP--- 401 L ++ L P D S+ HVCHS R++EVL ++L+ L + Sbjct: 420 L------------LEPEQHQYALSPDDDSVQIHVCHSSLRQLEVLKEQLIHWLAQGNEEA 467 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADR------------YLPYAISDRRARQSHP 449 P DI+V+ + P I++VF P +R YLP I+ Sbjct: 468 PRQPSDILVLTPSLKELEPAIRSVFAPPPRERETGSKRLQKDNLYLPIQIAGVSRLDVSN 527 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 A + + RF ED L + R+ + + + Q + ++G + G+D Sbjct: 528 AWRAVLGRIQWVRRRFSIEDFADWLSLNATQQRYGLDYSQVERMLQLLTDAGFKRGLDQQ 587 Query: 510 NVRELELPATG--QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567 ++++ + +++F L R+ LG A+ +Q L Y + L+ L + Sbjct: 588 HLQQSLSAGDEDYRFSFKFALDRLALGLAIPEH-TLFQDTLSYAKVLTSDFPLISTLIRI 646 Query: 568 LMQLNIWRRGL-----AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L R L Q P++ WL R LN F E+ + I + ++ Sbjct: 647 YQDLVERRDWLTLHETGQRTPVKTWLEYLRADLNEFRDAGVESLKTVAEIIDKQMRMLTL 706 Query: 623 GLGAQYGDA----------VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 D +PL + +E+ L+ ++ Q G + + +R +P+ Sbjct: 707 ADYHDQDDPHASQELVALSLPLPYVLEEIQNTLE-MQLDQAEPTGQITFSQIGQIRPLPY 765 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLM-SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 K+V +L ++ G +P + + FDLM S KP+ GDRSR DD++ FL+AL+ AQ+ L++ Y Sbjct: 766 KLVVMLNLDSGKFPSRNQQVPFDLMRSLKPQLGDRSRLDDEQGAFLDALLLAQENLWLFY 825 Query: 732 IGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD------ESEARVKAHLTCLHT 785 G ++D R PS +QEL+ +I +A S A+ L +H Sbjct: 826 NGFDLEDGEARDPSTALQELVQHIALICQSEQPDAEIDPMVDIHGLSVAQHIRQLYHVHP 885 Query: 786 RMPFDPQNYQPGERQSYAREWLPAAS----QAGKAHSEFVQPLPFTLPETVPLETLQRFW 841 PFDP + + Y +W A GK S P + + + + Sbjct: 886 LQPFDPAGFADMQTPRYQDQWFAVAEYIRSAEGKRSSWINAHYPALEQKEIRVLKGDEWI 945 Query: 842 AH---PVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF 898 P R F + V+ EP +L L +YQ+ LL E+ Sbjct: 946 RDMIFPARLFLKSV-GVSTIRYADLPSSREPLLLNKLEQYQVRDFLLQQ-------EQEI 997 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLA--CNGVQITGWL 956 LP G + W QE Q L +R++ + + + I + Sbjct: 998 EPNLMLDRLPVGKTQQATWLGSQQEQQLLQERLLQLGKELTPVTQQSWQFSPELIIHINV 1057 Query: 957 PQVQPDGLLR-WRPSLLSVAQGMQLWLEHLVYCA-----SGGNGESRLFLRKDGEWRFPP 1010 PQV + S S + Q+WLE+L++ A + R+ + + +F Sbjct: 1058 PQVPNSSYWLSMQSSSASEKRRAQIWLEYLLWLAYLNDDARSPELERIVIFSNKTLKFSG 1117 Query: 1011 LAAEQALHYLSQLIEGYREGMSAPLLVLP----ESGGAWLKTCYDAQNDAMLDDDSTLQK 1066 L++ +A YL ++ + G PL++ + W + + + + L K Sbjct: 1118 LSSSKAHEYLQLWLKAWEIGQQQPLVLPAELLMKKEWQWAENEHGK---MTIVEMPELLK 1174 Query: 1067 ARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETM--EAIVEQSQRFLLPLFRFNQ 1121 A ++ + +Q + + P+ + + P+ + + Sbjct: 1175 AWNNSYESAKPLASDESSLLHQDWQFILQDQDPDLALQNCCHDFAHGLYAPIHQHLE 1231 >UniRef50_A5GU99 Exodeoxyribonuclease V gamma chain n=1 Tax=Synechococcus sp. RCC307 RepID=A5GU99_SYNR3 Length = 1071 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 259/1158 (22%), Positives = 442/1158 (38%), Gaps = 140/1158 (12%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 MLR+ SN ++ L + ++R + +P P+ +L+ + M++WL + LS++ GI A I Sbjct: 1 MLRLISSNSIEDLATALASELDRHKPANPLTPQRVLISTNAMSRWLALALSERIGICAGI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPK--ESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 +F + + + + +P ++ + W+L L+P L + E + L+ Sbjct: 61 EFDFAGRHLRQLILELDGRLPAGHRDPWDPSQLRWQLAQLIPALPQTELWEPLQQLWHQG 120 Query: 119 SDKR------KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVE----GLGEAQAWQAPL 168 ++ + QL + +D DQY +YRP + +W G V+ L Q WQ L Sbjct: 121 PQQQDNGLDTQRLQLILQLSDTLDQYGLYRPQMVRRWLNGESVDGSHAPLAAHQQWQPAL 180 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQAL- 227 + L + G P H A +E + L + G+S+LPP + L Sbjct: 181 LRELAQRLEPSGIP--HPAERLLHALEQSRQRSDPHEPL----HVFGLSSLPPALWKLLA 234 Query: 228 -QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 +A + + L +P WG LP E Sbjct: 235 QRASSRDSPVLLYQLSPSLDPWG-----------------------SLPPSHHEEGDALD 271 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLS-------DLESSQELDAFVDVTPDNLLHNIQ 339 G+PLLAS G+ RD+ + L + Q+ A + LL ++ Sbjct: 272 RLERRLLHQGHPLLASLGRTQRDFHWQLELIAADLQEQFERQQRPAPLCPEEAGLLQQLK 331 Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 +D+L R IE L ++ CH +R+VE H+ LL ++ Sbjct: 332 ADLLVGRPRGEGLPGIE------PPLKLQRNQLNLEVLACHGDRRQVEAAHEALLRLMAG 385 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA---DRYLPYAISDRRARQSHPVLEAFIS 456 DP++ PR I+VM D+ ++P + AVF R+LP ++DR RQ +P ++ Sbjct: 386 DPSIEPRHILVMTPDVARFTPLVLAVFERPGRSSDPRHLPVRVTDRTLRQRNPRVDLVFR 445 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 LL+L SR +DVL +L +P LA ++ R+ ++++GI WG D D+ + Sbjct: 446 LLALASSRLSRDDVLDVLLLPELAEHLELGGLTQPQWRELLDQAGICWGRDGDHRQSWGY 505 Query: 517 PATGQHTWRFGLTRMLLGYAMES-------AQGEWQSVLPYDESSGLIAELVGHLASLLM 569 PA +WR+GL R+LLG + A GEW + ++S +++ L Sbjct: 506 PAGDAFSWRWGLDRLLLGLELSDGFPEQEAASGEWGGLAACNQSLATANDVL-ALHDACS 564 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 +L + L+ P E W + D E + + + G Sbjct: 565 RLFEQLQALSGPLPAERWNEQIGSAIQQLSGGDDEG-WQAPEVYELLTPLRD---PEASG 620 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 A+ + + L + Q++ ++G V++ L PMRSIP +VV LLGM++ PR+ Sbjct: 621 LALDRAAVVRLLEEAEAQQQGRYGHVSGAVSLSALEPMRSIPHRVVVLLGMDEQRLPRRD 680 Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 G+DLM Q+P RGDR RR +DR + LEAL + +Y + ER P+ + Sbjct: 681 QRPGYDLMLQRPWRGDRDRRQEDRAILLEALQACSDHWIATYNAIDPRSGEERNPAAPLS 740 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 +L+ + +S+ E + + + Sbjct: 741 DLLRCLERSYRTEAGEPITTWVLQQQPPLPPLT--------------------------- 773 Query: 810 ASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 A + A Q P E LE LQ++ P RA Q ++ E D E Sbjct: 774 AREVVGAPWPMDQRWPVDECEPASLEELQQWLRDPARALLQAH-GIHPHRRGDESSDPEE 832 Query: 870 FILEGLSRYQINQQLLN---ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 +GL R+ + Q+LLN +E + + G LP G + + Q Sbjct: 833 SAPDGLQRWTLGQRLLNLGSERLEANQWPQQRDALARRGHLPPGPAAIVSSDQPWQRCHA 892 Query: 927 LADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV 986 L + + + ++ S + + WLEHL Sbjct: 893 LLAKQAELQ----------------------DADGEAVVLMSNSRFKPKRLLDGWLEHL- 929 Query: 987 YCASGGNGESRLFLR--------KDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVL 1038 A+ + L L + W P + A+QA ++ + E + P+ + Sbjct: 930 -WANAERPQQTLLLGPMEQKGEERAAVWTLPAVEAQQAKAWIDDWQQWREEALQRPIAWI 988 Query: 1039 PESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLT 1098 PE L D + + + + G+ Sbjct: 989 PELNWQLLSQQQDGSLPGLSAQQLKELNPPGRNDYEWPSAWLQLLGGEAPSIASWLEHPE 1048 Query: 1099 PETMEAIVEQSQRFLLPL 1116 + S R+LLPL Sbjct: 1049 A------EQLSLRWLLPL 1060 >UniRef50_D1R7X4 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7X4_9CHLA Length = 1144 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 252/1213 (20%), Positives = 460/1213 (37%), Gaps = 178/1213 (14%) Query: 3 RVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDF 62 V+ SN++++L ++ + PF +I+V S M W+ ++++ GIA + Sbjct: 8 HVFFSNQVELLIHPLKQQLLG---AHPFCRRLIIVPSPAMKSWVMFKMAEESGIAMGFET 64 Query: 63 PLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLL---------EREDFTLLRH 113 I ++ + P + + ++ L + Q+L E E + L Sbjct: 65 IYLDQGIQRLYQLIEPNQTLANHPSSFELTLALEVEVRQILMRCESLSSEEHELWKPLFG 124 Query: 114 YLTDDSD--------KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQ 165 YL +++L L K A LF +Y + + L W +WQ Sbjct: 125 YLRFSPSIKTLSLKGEKRLISLVEKLAGLFLEYGIAGGEALEAWRQ-------APPSSWQ 177 Query: 166 APLWKALVE----YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPP 221 LWK + E Y ++ ++ ++ I+ L+ V + +S LP Sbjct: 178 VYLWKKIFERGNAYNWTYPYHYLNQISIPEKRIDQLQ------------VHLFAMSYLPA 225 Query: 222 VYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSE 281 +Y LQ + + I + +PC +W D ++ ++ + + Sbjct: 226 LYHNFLQKIAQAISVSFYLLSPCEAFWSDACSDKESKRMQRYWKKQDAPEAQQVAL---- 281 Query: 282 NAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL-----------ESSQELDAFVD-V 329 + NPLLA++G+LGR+ + D + + + + + Sbjct: 282 --------EELLRDKNPLLANFGRLGREMAVAVEDSNVRTSACYTLPARALDFPCYEESI 333 Query: 330 TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVL 389 T D LLH+ L L + + L DS+I H S REV++L Sbjct: 334 TSDILLHSSDRPYLTLLQAVQTDMVLFRNPDHTPPLDLSENDSTIQIHATPSLLREVQIL 393 Query: 390 HDRLLAMLE---EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 HD L+ ++ ++ L+P + +VM DI Y+PFI+ VF + + L Y + D + Sbjct: 394 HDNLIRLIHNAPKENPLSPNEWVVMAPDIRIYAPFIKMVFSNPNSP--LDYKMMDAELPE 451 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 + +++F+ LL L SR+ + +L L D ++ + E + +R W+ E+GIRWG+ Sbjct: 452 QNLYIQSFLHLLKLSSSRWDTVSLLTLFDYLPFRNKWGLHFEDIDQIRTWIKETGIRWGM 511 Query: 507 DDDNV---------RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 D + + TW G +L G +E Sbjct: 512 DIAHRQMILKQDHCAHTLVDENPAGTWEHGFQMLLKGLILEENDTILS-------VDITQ 564 Query: 558 AELVGHLASLLMQLNIWRRGL--AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 + L+G ++ L+ L ER ++EW + + N + LP+ + +E Sbjct: 565 STLLGKWIYIVRSLHQDLIPLNDGSERTIQEWGTYLQHLSNFYLLPELSEHQEL--LEHL 622 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKV 674 G ++ L +E +S R + V C+++PMR+IP K Sbjct: 623 LHPF---FKGFLPQHTFSFKTIQPILLSLFKKEDVSYRETSLRAVKFCSMLPMRAIPAKG 679 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRG-DRSRRDDDRYLFLEALISAQQKLYISYIG 733 + LLG+ +G +PR L L++ P+ S+ D DRYLFLE L SA++ L +SY Sbjct: 680 IALLGLEEGAFPRFLPESSLHLLAFHPQADYSPSQIDFDRYLFLETLTSAREYLLLSYQA 739 Query: 734 RSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 S E+ PS+LVQEL+ Y+ +S+ L H ++PQ Sbjct: 740 FS-STGKEQPPSLLVQELMSYLDKSYRLGDTCPS----------KRCFFKHPFHGYNPQY 788 Query: 794 YQPGERQSYAREWLPAASQAGKAHS-----------EFVQPLPFTLPETVPLETLQRFWA 842 + S+++E +A + K PL + + L Sbjct: 789 FDNSSLNSFSQENYRSALASLKTEKTSKHCFIPKFLSLRTPLCLEEEHILEIRQLIALAR 848 Query: 843 HPVRAFFQMRLQVN-FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRF 901 +P +F RL + + E +IPD + F L LS+ + ++ L + + L + Sbjct: 849 NPFEHYFNKRLGIYLEKEESRKIPDDDLFSLTSLSKASLKKEAL-----KHPLDALLTQN 903 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQ----LAD---------------------RVIACRQ 936 G LP+G F + + +E++Q L + ++ Sbjct: 904 EIKGRLPFGYFKALSLDQLKKEIEQNKSLLLNCGIALDQIFQIELTDAVSEPTQIHPACW 963 Query: 937 PGQSMEIDLACN-GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGE 995 +E+ + ++I G LP+V P GLL + + ++ W +L+ Sbjct: 964 LLPPLELTYQVDKRIKIVGILPEVTPQGLLAF--IRDEKKEVIKAWPAYLILNCLANVYP 1021 Query: 996 ----SRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYD 1051 L K G + P +Q L ++ Y + +LPE W+ + Sbjct: 1022 DMFGKHLIFAKSGSIKAPFF--DQPFTLLEHFLDYYFICQTHVSPLLPE----WIPDMIE 1075 Query: 1052 AQNDAMLDDDSTLQKARTKFLQAYEG--NMMVRGEGDDIWYQRLWRQLTPETMEAIVEQS 1109 L +QK+ T Y N M RG+ D + + E + Sbjct: 1076 NPKSCQLK----IQKSLTGHFSLYNDYVNWMTRGDVDLDYVSLV---------SEWQELA 1122 Query: 1110 QRFLLPLFRFNQS 1122 + P++ + Sbjct: 1123 TAYFSPIYTHWYA 1135 >UniRef50_A2BX92 Possible exodeoxyribonuclease V subunit C 125 kD polypeptide n=7 Tax=Prochlorococcus marinus RepID=A2BX92_PROM5 Length = 1060 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 176/1156 (15%), Positives = 414/1156 (35%), Gaps = 131/1156 (11%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPE--MILVQSTGMAQWLQMTLSQKFGIAA 58 ML +Y+SN+++V+ L+ + P E I V + + +WL ++ I+A Sbjct: 1 MLNIYNSNKIEVISQLLAKELIISP---PLITEKLDIAVPNYFLGKWLWNEITVSNQISA 57 Query: 59 NIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 + +++ + + PEI +N +S+ W ++ +L ++ +R+++ Sbjct: 58 LYELKTISNYTETLLTNLFPEI-DMGVWNFESIKWGIIDSFEELDSYKESLPIRNWINKF 116 Query: 119 SDKRKL-----FQLSSKAADLFDQYLVYRPDWLAQW-----ETGHLVEGLGEAQAWQAPL 168 + +K+ + L+ K A+ F YL++RP+ ++ W + +L L + WQ L Sbjct: 117 LNNKKIIDGDIYNLTKKIANNFIDYLIFRPEMISNWHKYDLNSQNLFNNLNSNEYWQPIL 176 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQ 228 +K L Q P I+ ++ +P ++I + L +++ Sbjct: 177 FKLL-----QKKMPEKPSCLYMIEVIKNIKKLQNYKNKIPKCIYIISDNNLSRLHVDFYS 231 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 L + +++L + W I F EN L N Sbjct: 232 KLAEFTKVNLYLLSVGDNLWNRINS-----------------IEGEVDFGGIENKLYLNN 274 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDA-----FVDVTPDNLLHNIQSDIL 343 + E +GK G +Y L+ + + ++++ ++D T ++ I Sbjct: 275 ASIEG--------IFGKFGANYQKLIEETSNIEDINLNTKSIYIDPTINSSRKKDVPLIN 326 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 +++ R + ++ D SI F + ++E + ++++ +LE + Sbjct: 327 QIQKRLI--------DNKKYDFIINERDDSIIFRGHFNQLSQLEFVRNKIIEILETCEEI 378 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPAD-RYLPYAISDRRARQSHPVLEAFISLLSLPD 462 DI ++ PF++ +F + + + LPY + S + +++ L Sbjct: 379 KYSDIAIVSPQTGLIKPFLKYIFNNELINGQKLPYFFIEGDYEDSSNIYNFLLNITQLAG 438 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + E + L F+ + + +N+ G WG+D + ++ Sbjct: 439 EKITLEKIEYFLSQDFTQNIFNFDMKEKEEIILLLNQVGFHWGLDSNERL-----GEEKN 493 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 + + + R++LG + + L + + + +L++L + L Sbjct: 494 SLEWCINRIILGLIYDKEFNFINNNLKSFSPKNISLD-LNKWVKILIKLKEYINLLRGSF 552 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 W+ + +LN + + I ++ + + Q + L++ R+ L Sbjct: 553 SYSVWVKKIKYILND---VNDFHQNFYLEICDLYRVMNNYSISYQSDQIIVLNVFREILI 609 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 ++ + + + + +R IP + L+ MN+ YPR +++++K Sbjct: 610 SCINNSKYKNESYINKILVSDIEKIRLIPRNTIFLINMNNVYYPRLTIKENINILNKKYS 669 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 GD S D ++Y FLE LIS +++L +S++ +DN + S ++ELI+Y + Sbjct: 670 LGDPSVFDREKYFFLELLISCRKQLIVSWVNND-KDNKKLDISYPIKELINYFESFLTIK 728 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQ 822 +++ +D Q + E ++ + + + Sbjct: 729 QRKSIIKYFD----------------YDKQQFSKTEENTFTSHYTLIDKIDWEEKKFDCK 772 Query: 823 PLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 L L ++ P + ++ + PD E + + Q+ Sbjct: 773 NFK--------LSELIYWFKTPQLYWLNKN-NISPKGIFIHHPDDE--YVTNFQKSQLVN 821 Query: 883 QLLNAL-------VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR 935 L+ + +++ + +F G + + + LA + Sbjct: 822 NLIQKIEIDNHNCIDELKNLNIREQFIENGIIAPKKSIFSKEKEIKDLVLSLATNLSQNN 881 Query: 936 QPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGE 995 ++ + N ++ ++ L+ S L++ + + W++ L + Sbjct: 882 NIDRTY---IKSNSNKLEYFIAGEVVIELIH---SKLTLKRLSEAWIKLLFISSLDKKIA 935 Query: 996 SRLFLRKDGEWRFPPL----AAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYD 1051 + + + A L + I ++ L + PES +++ Sbjct: 936 KTKVIFRKENLYKSEILQSPDPYYARKILEEYINIFKNFSEKCLPLPPESTYKYVEAKMQ 995 Query: 1052 AQNDAMLDDDSTLQKARTKFLQAYEGNM-MVRGEGDDIWYQRLWRQLTPETM----EAIV 1106 ++N+ F + GN +GE D+ Q + + Sbjct: 996 SKNEK------------KAFSDRWIGNKSFTKGERDNTEIQLCFGNKKEPNFFFENDKFD 1043 Query: 1107 EQSQRFLLPLFRFNQS 1122 + S R PLF ++ Sbjct: 1044 DLSLRLYAPLFEALRN 1059 >UniRef50_Q6MFB7 Putative exodeoxyribonuclease V gamma chain n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MFB7_PARUW Length = 1195 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 260/1158 (22%), Positives = 444/1158 (38%), Gaps = 173/1158 (14%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK--FGIAAN 59 L V+ SN+L +L ++ + + PF+ +++V M WL + ++Q GIAA Sbjct: 38 LEVFFSNQLSILYEQLKNNLFGFK-QTPFKKRLVIVYGPAMQTWLTLKMAQDPDLGIAAG 96 Query: 60 IDFPLPASFIWDMFVRV-LPEIPKESAFN-KQSMSWKLMTLLPQLL-----EREDFTLLR 112 I+F + L S ++ +L+T+L E++D+ L Sbjct: 97 IEFLYLNQAFETLIHYFQLKNEKIPSILELSLAIEKELLTVLQDYHRLSDEEQQDWLTLI 156 Query: 113 HYLTDDSDK------------RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGE 160 +YL +S + ++L LS A +F +Y Y +++WE E Sbjct: 157 YYLKLNSKQVGENLKLTRKMEKRLTGLSYHLAKIFQEYGKYAYSLVSKWEK-------SE 209 Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 + WQ+ LWK+L G W +A F +TL+ C V IS + Sbjct: 210 HRGWQSRLWKSLF--GGNQGWTYWTKA-----FQKTLKFFPECE------VHFFSISFIS 256 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 Q L L I+ +PC +W DI+ L T ++ Sbjct: 257 KAEFQFLSKLANVAPIYYYLLSPCAVFWSDIRSDNETRYLQTYWQQK-----------LG 305 Query: 281 ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE------------------ 322 A Q+ + NPLLA++GKLGR+ Y + + +++ Sbjct: 306 SKASQVLQLEELLRDRNPLLANFGKLGREMAYQIEESQATTHAGYILPSHVSELNDEIFF 365 Query: 323 -LDAFVD--VTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVC 379 D F+ + P LLH IQ+DIL + N + D SI H+ Sbjct: 366 QEDLFLKESLQPLTLLHAIQADILMMRNP-----------EGKPPFNFERKDDSIQLHIA 414 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 S +RE+++L+ LL + E+D TL P DIIVM I Y P+IQ+VFG + L + I Sbjct: 415 PSIRREIQILYHNLLKLFEKDSTLQPNDIIVMAPQISDYVPYIQSVFG--LEESQLDFQI 472 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 D + +++ F L+ L +SR+ ++L L + +T+ +++W+ + Sbjct: 473 LDLGMQAQSEIVQGFFQLIRLSESRWEVSELLQLFGHRLFQRCHQLTQSDYYLIQEWIQQ 532 Query: 500 SGIRWGIDDDNVRELE---------LPATGQHTWRF--GLTRMLLGYAMESAQGEWQSVL 548 +GIRWG D + EL + ++ TW F + L ++SA + Sbjct: 533 AGIRWGEDWLHRNELLQRHHCEKEMVDSSSVGTWNFGLTRLLLGLTTVVKSADSHSFDSI 592 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP--LEEWLPVCRDMLNAFFLPDAETE 606 P + AEL+ LL L L +EEW +L+ +F + E Sbjct: 593 PCEGIDFSQAELMERWIRLLHSLRDDLSPLHDRSQMCMEEWSCYLSCLLDTYFKCEFEDS 652 Query: 607 AAMTLIEQQWQA--IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP-VNICT 663 ++ E+ ++ + ++ L L Q I+ R + C+ Sbjct: 653 QSIADYEELKSQFKLLGDSAKTFKETKFSFQTIKFHLNNLLQQRGITYRESHLQTIRFCS 712 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG-DRSRRDDDRYLFLEALIS 722 +MP+RSIP KV+ +LGM +G +PR +LM + + + D DRYLFLEAL S Sbjct: 713 MMPLRSIPAKVIAVLGMQEGAFPRAGYHTSLNLMVGQDNLDYNPNSTDYDRYLFLEALQS 772 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 +SY G + QD+ PS++++E Y+ + + + + + Sbjct: 773 VTDVFIVSYQGYTYQDSKVLQPSLIIEEFFTYLDKYYLIQNKK----------ISEQCVS 822 Query: 783 LHTRMPFDPQNYQPGE-RQSYAREWLPAASQAGKAHSEFVQ-----------PLPFTLPE 830 H FD ++P +Y++ A Q + H L LP Sbjct: 823 KHPFDAFDVSYFKPNSILNNYSQFDYRIAEQYYQTHKTPSHRLLKQFILSNYSLEDILPS 882 Query: 831 T--VPLETLQRFWAHPVRAFFQMRLQVN-FRTEDSEIPDTEPFILEGLSRYQINQQLLNA 887 + L+TL PV+ + L + ED I + E L L++YQ+ Q L Sbjct: 883 HTVIDLKTLNTLVRSPVKFYLNRGLDIYLEGYEDRIIKNQEELGLSALNKYQLKQFALKE 942 Query: 888 LVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC 947 E++ + G LP G F + + E+ ++ R+ + + Sbjct: 943 -----PFEKVMQIADKEGKLPLGMFKTVATKRFKDEIDEVHQRLYKHGINPSEL-FQIEF 996 Query: 948 N---------------------------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL 980 + I G LP V GL+ + + Sbjct: 997 CTSCSEPCQIQKDQWLLPALQLNYSDQYQISIIGKLPFVSKKGLVVLSQGSG-FSDAWKA 1055 Query: 981 WLEHLVYCASG----GNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLL 1036 W + L++ + E L L K E + + ++ YL LI Y M Sbjct: 1056 WPQFLLFNYATTFNIEAIERNLILSKSSEVKKAFF--KDSIPYLKHLINYYALSMRNFSP 1113 Query: 1037 VLPESGGAWLKTCYDAQN 1054 + P+ W+ + + Sbjct: 1114 LFPD----WIPSLIEGDE 1127 >UniRef50_A5EWC3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EWC3_DICNV Length = 1090 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 249/1182 (21%), Positives = 438/1182 (37%), Gaps = 156/1182 (13%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M R+ + L L + DD F I+V S +A +L+ +++K GI+ Sbjct: 1 MFRITQATDLAHLMPDFLTALHDYP-DDIFAETEIVVPSMAIADYLEHHIAEKMGISCRH 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLP----QLLEREDF--TLLRHY 114 + W + R+ ++ + ++ W+L + L ++L ED L HY Sbjct: 60 RYRFWGEMEWTIIERLSNRSAAQTPLSTTAIHWQLFSWLYAHRAEILADEDHVLAPLLHY 119 Query: 115 L------TDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL------VEGLGEAQ 162 L D+ +L+Q S + A LF YL RPDWL W+ + L E Sbjct: 120 LLAPSSARDEQTLPRLWQFSGEQAQLFTHYLKMRPDWLLTWQQKPDCHLEDIIATLPEMP 179 Query: 163 AW-----------QAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRV 211 W Q LW+ L HR ++F L P LP+R+ Sbjct: 180 TWLRQHYDGVFTVQKYLWQQLFAEA------MEHRQQRIEQFYHRLSVDDALPA-LPARL 232 Query: 212 FICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFED 271 F+ +L L LQA G+ E+HL Y+ DI D + Sbjct: 233 FVFHPFSLTDHMLHWLQAFGQRCEVHLWLALVSNGYFPDIVDERWRQ------------- 279 Query: 272 RELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQEL----DAFV 327 N+D G+ L++ +GK RD L +E+ Sbjct: 280 -------------SHTNADEHFRSGHVLVSRFGKQQRDIFRLCQSHNLLEEIQHITPHSA 326 Query: 328 DVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVE 387 D +LL +Q+D+ L++ S PL P D SI H CH R++E Sbjct: 327 DTAQQSLLQRLQADMRALDD-----------QSSLTAAPLVPNDDSIRIHGCHGLLRQLE 375 Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY--LPYAISDRRAR 445 +L + L+ L D T DI++++ +++S I+ VF ++ LP ++ Sbjct: 376 LLREELVRWLNADETRQLSDILIVLPELESVQDVIRTVFPASGDYDGAVLPARLTGIIDS 435 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 + + +A + L + F L + + + I ++ ++ + +G G Sbjct: 436 SAQRLWQAISGIYVLATTPFNRHTFLQWVLQEEVCTAYGIADKAMQRTCDQLIAAGFYRG 495 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 + ++ + + T + L R+L G AM A ++++P A + LA Sbjct: 496 FEQQDLETV-ADGDARFTLSYALERLLSGLAMPQADIWLENIVPEHNIRNDDAAALAVLA 554 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA---- 621 + Q++ R + WL R L F T A LI Q + Sbjct: 555 QIHQQISTIRVQQKNHTTAQFWLDELRQRLEHDFSAFQTTA-AWQLIAQTLTELTEKLQA 613 Query: 622 --EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 + A +PL + + + ++L +++ +G + I + MR++P++++ +G Sbjct: 614 HHQLTAAAADLYLPLPFILNYIGEQLSTRQVASEP-SGVITIGRIGAMRALPYRLIAFVG 672 Query: 680 MNDGVYPRQLAPLGFDLMS-QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 + +P ++A +L++ P+ GD R D+ FL AL SA + Y D Sbjct: 673 ADQEQFPHRIAEQRHNLLTIDAPRLGDYHREHDELGSFLHALSSAGSHFWCFYTAVDPND 732 Query: 739 NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE 798 + ER P+ VQEL+DY+ Q+ H H PF + Y Sbjct: 733 HEERLPAAPVQELLDYLAQNGV--------------DQYLHYHLRHQPNPFHREPY---- 774 Query: 799 RQSYAREWLPAASQAGKAHSEFVQPLPFTL-------PETVPLETLQRFWAHPVRAFFQM 851 R + A W ++ + + LP + +T+ L + R P R F + Sbjct: 775 RTAPAPLWQKVQHHLQQSAPDVLPFLPESETFTVNQAEKTMLLSQIARDLLKPARTFLRA 834 Query: 852 RLQVNFRTEDSEIPDTEPFILEG----LSRYQINQQLLNALVEQDDAERLFRRFRAAGDL 907 +++ D EP + + L R+QI Q LLN F+ L Sbjct: 835 H-KIDCSVTDVATDILEPLVFDAQSDGLKRWQIYQALLNDSPH----------FQYLPFL 883 Query: 908 PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLA---CNGVQITGWLPQVQPDGL 964 P GA G + Q Q ++ ++ C ++ + L + QI+ LP V+ + Sbjct: 884 PAGAAGHHYHLLQNQRIEAQRAQLFECTGERENTPLQLKTVSFSNGQISADLPAVEVNKW 943 Query: 965 LRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDG---EWRFPPLAAEQALHYLS 1021 + SV WL +L++C G GE L + +RF PL E A L Sbjct: 944 VSLSARRYSVRSIFSEWLHYLLWCVQTGGGERWLSFAEKEMSVVYRFLPLECETAERELK 1003 Query: 1022 QLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMV 1081 + + + + L + E + +KA ++L + Sbjct: 1004 NWLAIWSR-LDSILGMPLEIAWEIAVAQKEKNP----------EKAVEQWLNKEIYDD-- 1050 Query: 1082 RGEGDDIWYQRLWRQLT--PETMEAIVEQSQRFLLPLFRFNQ 1121 + ++Q L R ++ E Q L + + Sbjct: 1051 ----EKEYWQLLLRGQNSTELLLKRWHEY-QPLFAFLVQHIE 1087 >UniRef50_D0LXX8 Exodeoxyribonuclease V n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LXX8_HALO1 Length = 1274 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 232/1106 (20%), Positives = 396/1106 (35%), Gaps = 133/1106 (12%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDD----PFEPEMILVQSTGMAQWLQMTLSQKFGI 56 MLR+ +SN + L + + ER P I+V + + ++++ ++ + G+ Sbjct: 1 MLRLTYSNHFEELCRALCQELAAERRRRRQLLP-ATAHIVVPNHHITAYVKLAVANQLGV 59 Query: 57 AANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQ--LLEREDFTLLRHY 114 AAN+DF +SFI + V E + + L+++L LL ++ + Y Sbjct: 60 AANLDFRFISSFIAEC---VPDERRDLRVLDTPHLHALLLSVLADEALLAEDELAPVAAY 116 Query: 115 L-----TDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGL--GEAQAWQAP 167 L D+ + FQL+ + A LF Y + R D L W G + + WQ Sbjct: 117 LGAAGGEQDAVDLRRFQLAQQLATLFSDYRLSRGDLLRAWREGPALGDTRSAATEIWQRR 176 Query: 168 LWKALVEYTHQLGQPRWHRANLYQ-RFIETLESATTCPPGLPSRVFICGISALPPVYLQA 226 LW A+ + L ++ E + +P V + G S LP + + Sbjct: 177 LWLAIFDAERGLLARIREETGVHWVHGPELFDEYLIKDLAVPRSVHLIGFSYLPWAHHKV 236 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 L+ L + I +H+ NPC +W D++ + +L RQ + D F D ++ Sbjct: 237 LERLSRFISVHVYAFNPCMEFWEDLRAG-WETRLAGRQLKSRKGDAVQLSFEDLDD---- 291 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV----------------- 329 P L WG+ GR+ + +L + FVD Sbjct: 292 ----------TPALRLWGRPGRENVRILDEQTQCDFDARFVDPAAPEAEDAAAADAADAA 341 Query: 330 ------------------------TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKR 365 P +LL +Q DIL AG + + Sbjct: 342 SSAESQAAAPDLFAGLGLGAAAAEPPVSLLAALQRDILFRHPARRAG--------APDAP 393 Query: 366 PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV--ADIDSYSPFIQ 423 L D S+ C S QRE+E++ + + +++ DP L DI ++V AD + Y + Sbjct: 394 ALVAGDRSVQILGCPSIQRELEIIGNEIWSLMARDPGLRFNDIALLVGRADQELYQAHVP 453 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 VF +PY +D ++EA LL LP RF ++L LL P + AR+ Sbjct: 454 GVFAEL---HGIPYHFADAAVTGESRMVEALGLLLDLPFGRFTRPELLRLLTHPAVLARY 510 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 + W GI G D + W+ G+ R+ LG M + Sbjct: 511 P--DVDPDDWVHWSERLGIVHGADTRDHAA-TYIERDLFNWQQGIRRLALGAFMAGERSG 567 Query: 544 WQSVLPYDE----SSGLIAELVGHLASLL----MQLNIWRRGLAQERPLEEWLPVCRDML 595 D L A+L+ A + R E+PL W M+ Sbjct: 568 ELRPFAMDGSAYLPEELPADLLPSAARFALVARSLIADARYCQQAEKPLARWRIFFDLMV 627 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 +++ P + + + +AI G V + + L RL + R + L Sbjct: 628 DSYLAPQNDEDER--NLAACREAIATLAGSDIDGRPVRYRIACELLRARLGKLRGERGEL 685 Query: 656 -AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 A V + L+PMR IP++VV L G+ +G +P DL + K +RGD S R+ DRY Sbjct: 686 LAHGVTVAPLLPMRPIPYRVVFLAGLGEGHFPASERESPLDLRAAKRRRGDVSPRERDRY 745 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 LFLE L+SA+++LY+SY+ R + PS +V EL + + G+ Sbjct: 746 LFLETLLSARERLYLSYVSRDERTGETLQPSPVVLELDHLVRSGYTGEGEGTS------- 798 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGERQ---SYAREWLPAASQAGKAHSEFVQPLPFTLPET 831 + H +DP+ + S R A + A + Sbjct: 799 -----IAIDHPLRRYDPRYFPALFATIGKSDDRSKSAAPAPTPAATATISDADADAAAGY 853 Query: 832 VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL--EGLSRYQINQQLLNALV 889 + + R AH + + L+ R +P G + ++L + Sbjct: 854 LSVAPAARRQAHVLA--LRRHLEHTLREHGHGMPSVGELRHALSGPRHAALRERLGWTAL 911 Query: 890 EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG 949 E A A+ G+ + ++ R + + + L Sbjct: 912 EAATAPPPRVELAASPTNENREPGDGAADEVVPISLRMLRRFLETPLQAWAAAV-LRLRE 970 Query: 950 VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWR-- 1007 ++ + Q P + ++ EHL A S + + Sbjct: 971 SELDDPVAQADESFSTPVAPMVGLLSDVFG---EHLSAGAPSLEALSERYAERAQYLELT 1027 Query: 1008 -------FPPLAAEQALHYLSQLIEG 1026 F + +E+ L L + Sbjct: 1028 GRSPTGVFSDIDSERHLAILQRWQAH 1053 Score = 45.9 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 41/329 (12%), Positives = 83/329 (25%), Gaps = 56/329 (17%) Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 V L ++ + G + E + + + A Sbjct: 866 VLALRRHLEHTLREHGHGMPSVGELRHALSGP-----RHAALRERLGWTALEAATAPPPR 920 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-D 866 + + + + L L+RF P++A+ L++ D + Sbjct: 921 VELAASPTNENREPGDGAADEVVPISLRMLRRFLETPLQAWAAAVLRLRESELDDPVAQA 980 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDA---------ERLFRRFRAAGDLPYGAFGEIFW 917 E F + + + + G P G F +I Sbjct: 981 DESFSTPVAPMVGLLSDVFGEHLSAGAPSLEALSERYAERAQYLELTGRSPTGVFSDIDS 1040 Query: 918 ETQCQEMQQLADRVIACRQPGQSMEIDLACNG---------------------------- 949 E +Q+ + + L+ Sbjct: 1041 ERHLAILQRWQAHIETLAPGPREPASVLSFGRAPETRDAGLLLPPLALPISLPDGEGGQR 1100 Query: 950 ---VQITGWLPQVQPDGLLRWRPSLL----SVAQGMQLWLEHLVYCASG--GNGESRLFL 1000 V++ G V D L + ++ +L+H V A+ L + Sbjct: 1101 VVRVELVGSTSPVFADPALGAVVTSYTDKERPRDRIRGFLDHAVAIAAECEDAAARTLSV 1160 Query: 1001 ----RKDGEWRFPPLAAEQALHYLSQLIE 1025 + G + P +A A YLS+L+ Sbjct: 1161 VTSGKHCGRYALAPWSAVDARAYLSELVR 1189 >UniRef50_C9RQA7 Exodeoxyribonuclease V RecC subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQA7_FIBSS Length = 1256 Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats. Identities = 193/1126 (17%), Positives = 365/1126 (32%), Gaps = 170/1126 (15%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML + + L+ L M V +PFE ++ + QW ++ QK Sbjct: 14 MLYLKFALNLENLADKMIDAVSDA-WTNPFEAPAVIFPDPKLEQWFRLKWVQKKKSLIGF 72 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMT-LLPQLLEREDFTL----LRHYL 115 + F + ++ + + + + + ++ L+ + ++ ++ YL Sbjct: 73 KSMMIDRF---LMEILIGDDTHKQKLHAEMLRNVILAHLVKETDGVPNYMRMDDEVKRYL 129 Query: 116 TDDS--DKRKLFQLSSKAADLFDQYLVYRPD-------------WLAQWETGHLVE---- 156 D D+ LF +SK A LF +Y RP L +W+ HL + Sbjct: 130 VIDRTLDETHLFDFASKMASLFLEYETSRPKDFIRRADGSSAPGILEKWKQDHLDDFFGI 189 Query: 157 ---GLGEAQAWQAPLWKAL-----------------------VEYTHQLGQPRWHRANLY 190 + + +AWQ L+ A+ +E T L P ++A Sbjct: 190 ANHDIAKREAWQRELYSAIFHEHQGKPSLLTEVFENEAKRKGIERTEYLTIPYLYKACQD 249 Query: 191 QRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGD 250 + T + L FI G+ + Y LQ + +++ NPC +W D Sbjct: 250 DKGNVTFHTEHIGNTPL----FIFGLGGMGQFYRVILQKYAETHDVYAYIQNPCMEFWED 305 Query: 251 IKDPAYLAKLLTRQRRHSFEDR----------ELPLFRDSENAGQLFNSD-------GEQ 293 + R + + D NAG+ + D E Sbjct: 306 TSTVHDQNANIHRNWKSRDGQWKDNGTSLDDVREKMSVDYSNAGESTDVDDISEYSNEEA 365 Query: 294 DVGNPLLASWGKLGRDYIYLLSDL----------ESSQELDAFVDVTPDNLLHNIQSDIL 343 + N LL +WG+ GRD I L + D+ D LLH +Q I Sbjct: 366 EAENTLLCNWGRSGRDNIKLWCQAVNYDFDFSMSGREDDNRTAQDLPQDTLLHKVQYAIA 425 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 N + D S+ + RE+E LH + +++ Sbjct: 426 NRINTLP----------NFTASDCKARDFSLDITAAPTKIREIEALHTNISKLMQ--KGA 473 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADR------------YLPYAISDRRARQSHPVL 451 DI+V+ +D Y I+ +F P + ++P+AI D AR S Sbjct: 474 RVNDILVVSPALDDYRTAIKTIFDQTPEKKKYAGENEKEGFLHIPFAIVDSPARSSLTE- 532 Query: 452 EAFISLLSLPDSR-FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 +L ++ + LL PV+ IT+E + W+ + I Sbjct: 533 NVLDNLFTILEQGTITRPTFFELLRNPVVQLTRHITDEDVSNWESWIEATNIYRDR---- 588 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS-VLPYDESSGLIAELVGHLASLLM 569 + W G+ R+LL ++ LPY + + + + Sbjct: 589 -------EQKKEDWMSGVRRLLLAKMTKNPVEFSDGEFLPYADMATSDNSSLCKFVECIE 641 Query: 570 QLNIWRRGLA-------------QERPLEEWLPVCRDMLNAFFLPDAETEAAM--TLIEQ 614 L W + L++ + L+ PD + + Q Sbjct: 642 SLKKWMEFAGCKQNVKHEIVCENRIENLDKLCDFINEWLSMASSPDGFASERIIVNDVTQ 701 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-AGPVNICTLMPMRSIPFK 673 + + + ++ +++ L S L + +P R IP K Sbjct: 702 SIEGLRNQMDA--GLQSISWKVVKQTLLNAAQSSAYSCGSLFVNGITFMNFIPNRIIPVK 759 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQ-KPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 + +G + +P DL +P GD S RY FL L+S + +ISY+ Sbjct: 760 HLFFIGGDSMNFPGAKQQNTLDLRKSCRPWPGDDSPIAKRRYAFLCQLMSTSESFHISYV 819 Query: 733 GRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ 792 + I+ ++E +P+ +V ++ ++ + D + + L F+ Sbjct: 820 NQDIRKDAELYPTSVVNDIRKFLVNAVNSKTDVSNEKVSQSDAWPENKISLDETRSFEDL 879 Query: 793 NYQPGERQSYA-----REWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRA 847 Q R A ++ A+ A + LP+ V + L F P + Sbjct: 880 FTQKSLRNKRAFLNMMQDGYAHANPETDAIESASNNITAKLPDRVSIYMLSSFLKDPFQF 939 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD--DAERLFRRFRAAG 905 L + +ED E EP L+ L + + + L A + + E+ + + G Sbjct: 940 RISQML-ADSDSEDPEKEMFEPVQLDALKKSTLLKMTLAAELSNKSDELEKFKKESKLKG 998 Query: 906 DLPYGAFGEIFWETQCQ--------EMQQLADRVIA---CRQPGQSMEIDL-ACNGVQIT 953 P G FG+ + + L ++ + + ++ + ++ Sbjct: 999 GTPDGIFGDKLSSEIEENKKIIMDNMGEALVKKIKESWCYQAKIEDIQFERSDSEKWTLS 1058 Query: 954 GWLPQVQPDGLLRWR--------PSLLSVAQGMQLWLEHLVYCASG 991 G L L + ++ + ++ L A Sbjct: 1059 GSLDWSDSSDLGKITEMISITSSNKKPTIDNFLTPYIRALAVIAQR 1104 >UniRef50_Q4FSM9 Possible exoribodeoxynuclease V, gamma subunit n=3 Tax=Psychrobacter RepID=Q4FSM9_PSYA2 Length = 1512 Score = 345 bits (886), Expect = 4e-93, Method: Composition-based stats. Identities = 198/993 (19%), Positives = 352/993 (35%), Gaps = 222/993 (22%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M + S+R + L + + + + FEP +++V S + WL T++ + GI+ + Sbjct: 1 MFTIIQSHRTENLVDQLL-VQYQSKNQPVFEPFIVIVPSMVLGDWLDKTIASRAGISTLV 59 Query: 61 DFPLPASFIWDMFVRVLPE----------------IPKESAFNKQSMSWKLMTLL---PQ 101 + W + VL +P+ + + M W+L L Sbjct: 60 RTKFWGQYQWTLMQDVLTRHNAYLLEIDPEAAILNVPEVAVLSPTVMQWRLFGYLTYYQA 119 Query: 102 LLEREDFTLLRHYLTDDSDKR-------------KLFQLSSKAADLFDQYLVYRPDWLAQ 148 L+ +++ + L D+ +++QL+S A +F++YL +R DWLA Sbjct: 120 LIVKDETHPVNPLLASLIDEPKEGGEQDKAQQDARIWQLASDLARVFNRYLTHREDWLAL 179 Query: 149 WETGHLV----------------------------EGLGEAQAWQAPLWKALVEYTHQLG 180 W + E E + Q LW L HQ Sbjct: 180 WSHNKPLNVDELIADKDALSLRFDKYARGTPDWLVEHYVELEVAQRFLWSHLFADVHQ-- 237 Query: 181 QPRWHRANLYQRFIETLESATT-CPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 HR + F L+ LP + I I LP L LQ L ++++I LL Sbjct: 238 ----HRVTIENTFWSALKDNKANERAQLPKILRIFTIQQLPQTELDFLQRLSQYMDITLL 293 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 NP + +W DI D ++L + S +D G+ L Sbjct: 294 HYNPSKLFWADIVDKSWLQRQQ----------------------IINPESVFLRDYGHSL 331 Query: 300 LASWGKLGRDYIYLLSDLESSQELD-----------------------AFVDVTPD---- 332 L+ GK RD +L++L +++ +F D D Sbjct: 332 LSRLGKQSRDTFAMLANLSGNEQYQDELVEWQDNFENSDDGLNDDFGFSFDDSAYDVDDA 391 Query: 333 ----------NLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP------------- 369 +LL +Q+D+L L+ ++ V S++ +K+ Sbjct: 392 NNSQITQNSPSLLRRLQNDVLMLDEQSTQQVTAATVSQAVSKQIEPSFDKEKPEMAWYED 451 Query: 370 ------------------LDSSITFHVCHSPQREVEVLHDRLLAMLEE-----DPTLTPR 406 D+S++ H CHS QR++EVL + L E + Sbjct: 452 EALENKRFERERFWVSSWQDNSLSIHSCHSLQRQLEVLRIMIGRWLNEPIKPGEKKRHIS 511 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRY--LPYAISDRRARQSHPVLEAFISLLSLPDS- 463 DI+V++ D++ + I ++F S LP ++ + EA I L S Sbjct: 512 DIVVLLPDVERHHALISSIFVSGKGQDGLTLPAKVTGVVDADIRQLWEAIIGFYKLLGSH 571 Query: 464 --RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL--PAT 519 RF + +VL L +P L F +T E + + E+G G D+ ++++ Sbjct: 572 SARFEAPEVLDWLMLPPLFESFGLTHEQMSRGCDLLVEAGFIRGFDELHLKQTLDSNDFD 631 Query: 520 GQHTWRFGLTRMLLGYAMESAQ----------------GEWQSVLPYDESSGLIAELVGH 563 + ++ L R+ LG M A + LP + S A +V Sbjct: 632 YRFSFAQALDRLTLGLVMPEASLSDCLYPLAQDDWPSTTLPEMSLPLPQVSLNDAMIVEA 691 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI---- 619 L + L R Q+ E+WL + + D + M I Sbjct: 692 LCRIYAGLVARRDDHRQKMKAEDWLDQIETEVIHRYFGDVDQTRTMRAIYNAMNGFKSSL 751 Query: 620 ------------------IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 + + L + LS + D + L+ +++S G + Sbjct: 752 RANRHYKQYSSADSANKEVEQKLAGVEQLPLKLSFMLDSIESELESQQVSAEP-TGVITF 810 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM-SQKPKRGDRSRRDDDRYLFLEAL 720 +R++PF++V +L MN +P + +DLM + +RGDR DDD FL+AL Sbjct: 811 GRFGALRNVPFELVVMLNMNLSEFPGRERDNRYDLMKATNARRGDRVSEDDDNGAFLDAL 870 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY------------LPGDEALN 768 + A+ ++ Y G+S+ D E P+ + EL+ ++ + Sbjct: 871 LCARSACWMFYNGQSLTDTHEHLPANPISELLQFLQGEIQWQVNSLETLPKNIDPTTESL 930 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQS 801 +K L H +PF ++ + Sbjct: 931 KRYLPKLIKQWLVTEHPALPFHESLFETEIEDA 963 Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 61/209 (29%), Gaps = 25/209 (11%) Query: 938 GQSMEIDLACNGVQITG--WLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGE 995 S+ +D + + + P L P+ S ++ WL HL + + Sbjct: 1300 PISVPVDAHNSRSHLQAGVSYAEQSPKQWLNILPNSASPRHLLKFWLSHLYWQVARRTTA 1359 Query: 996 SRLFLRKDGE-------------------WRFPPLAAEQALHYLSQLIEGYREGMSAPLL 1036 + ++ P+ E A+ L + + P+ Sbjct: 1360 EQAASNDGVSIWRFNKPSSQIKKYEKVTAFKLSPIVYEDAVVELIKWAVFAKLSGQVPIT 1419 Query: 1037 VLPESGGAWLKTCYDAQNDAMLDDDSTLQKA--RTKFLQAYEGNMMVRGEGDDIWYQRLW 1094 +LPE ++L C A+ ++A +Y + + +Q + Sbjct: 1420 LLPEYALSYLDKCLQAEESGDEIGSYWPKRADFSDWLRPSYYSDTIYDTCSQHAIWQYVL 1479 Query: 1095 RQLTPE--TMEAIVEQSQRFLLPLFRFNQ 1121 R A+ +Q P+F Sbjct: 1480 RDQDAFKALSAALSTLAQPLYEPMFAALD 1508 >UniRef50_C8NCI0 Exoribodeoxynuclease V, gamma subunit n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCI0_9GAMM Length = 1251 Score = 338 bits (867), Expect = 6e-91, Method: Composition-based stats. Identities = 186/886 (20%), Positives = 329/886 (37%), Gaps = 87/886 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M R+ S L A + DP ++V + + L TL+ + GIAA I Sbjct: 1 MYRLIESTDYPALLARYLQDYDHYSRADPLGDTPLIVPTLPVGNILIQTLASQRGIAAGI 60 Query: 61 DFPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQLLE-------REDFTLL 111 L ++ W + R+ ++ ++ W+L + L Q LL Sbjct: 61 TLRLWHNYEWMLVERITGKSRSSSQAPLGNTAIRWELFSYLYQHGNTILADPGHPQHALL 120 Query: 112 RHYLTD-----DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL--VEGLGEAQAW 164 R D R+L+ S + A+L+ YL RP+WL+ W+ ++ L + + Sbjct: 121 RGLYPDTDKITHDHTRRLWVYSGQLANLYSTYLNQRPEWLSAWQNADPPPLDALLKNDSL 180 Query: 165 Q------APLWKALVEYTHQLGQP-----RWHRANLYQRFIETLESATTCPPGLPSRVFI 213 Q A ++AL + +L R + F +TL++ + LP + + Sbjct: 181 QQLPPQIADHYRALYQQQSRLWHDRFAAIHAERERRRETFWQTLKTRESARRLLPPYIPV 240 Query: 214 CGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRE 273 + L ++ LG + ++ Y DI D +L +L R Sbjct: 241 FAPTHLHAAEHDFMRRLGNYTDLTHYHLAASDGYIDDIVDSRWLRELKARAAGKPSG--- 297 Query: 274 LPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDN 333 ++ G+ LL+ +GK RD LL + L A P N Sbjct: 298 -----------------EHREHGHELLSRYGKQQRDLSRLLHADSDPEPLPA-TPAPPHN 339 Query: 334 LLHNIQSDILELENRAVAGVNIE-----------------EFSRSDNKRPLDPLDSSITF 376 LL +Q++I EL+ VA E + N P D S+ Sbjct: 340 LLTALQAEIRELKEDHVAACLAATTLPPSLQSGGRTGRGCENRAATNPDHQTPQDHSLRI 399 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF---GSAPADR 433 H CHS QR+ E L ++A L DP+ DI + + D + ++A F G +R Sbjct: 400 HGCHSLQRQCETLRSDIVAWLNADPSRRLSDIYIHLPDPAAAQTTLRATFPPGGDYDGNR 459 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 LP + + + + +L + RF + VL L I E ++ + Sbjct: 460 -LPARLIGVTENPAENLWRSLAGRYTLINGRFDAPTVLDWLHNEDTCHSLGINSEHMQRI 518 Query: 494 RQWVNESGIRWGIDDDNVRELEL--PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 + +G R G D +++ ++T+ + L R++ G A ++V P Sbjct: 519 TAALVAAGYRRGYDGAHLQPTLHTEDHDHRYTYTYALNRLIAGVLTPDADHYREAV-PQH 577 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + + LA+L ++ R A+ P + WL R L+ + A A Sbjct: 578 GLTLADLPALEALATLAENMHTLRALQAENTPAQNWLQHLRATLHDAY-THAHNSPAWQT 636 Query: 612 IEQQWQAIIAEGLGAQYGDA------VPLSLLRDELAQRLDQERISQRFLAGPVNICTLM 665 ++Q + + Q +PL + + + +L ++ S +G + I +L Sbjct: 637 LDQALDDLQNQLAAHQALAPQNEQHYLPLEFILENIENQLADQQNSSEP-SGVITIGSLK 695 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS-QKPKRGDRSRRDDDRYLFLEALISAQ 724 +R++P K+ L + YP + ++L+ KP+ GD +R +D L+ + A Sbjct: 696 NLRNLPGKLHIFLNADHDRYPARQNDERYNLIHLDKPRPGDNNREHEDLGALLDLINRAG 755 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD--EALNCDESEARVKAHLTC 782 L++ Y S DN + P+ VQEL+ Y+ H A ++ + H Sbjct: 756 DALWLYY--NSHHDNEPQPPASPVQELLQYLDDQHERASQHLRASGRLDAGQTLPRHYHT 813 Query: 783 LHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 H PF P R + E + Q + P P Sbjct: 814 EHPADPFQPD--AHETRPAPLWENIRTTLQQNTPTATETSPPPVGE 857 Score = 91.4 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 93/300 (31%), Gaps = 20/300 (6%) Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 PE + L + R P A+ + + + EP L GL +Q +Q ++ AL Sbjct: 964 PENLTLAQIVRDLQKPASAYARAH-HIANTAAQTPPESREPLALYGLDNWQADQHIIAAL 1022 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV--IACRQPGQSM-EIDL 945 + P G G+I E + + + A ++ E L Sbjct: 1023 EQNHP--DPATHIARLPAYPGGISGQIQLEQRLATYRARQQTLLDRADLATWPTLREQTL 1080 Query: 946 ACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGE 1005 L R S + WLEHL + A+G +G + + D Sbjct: 1081 NLGEHSSLTALLPAHSPTWPRLSASRAKPKHHARYWLEHLAWNATGAHGTTLIHYADDTL 1140 Query: 1006 WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQ 1065 R PL A A L Q + L E +L+T + Sbjct: 1141 LRLAPLPAADAQRQLHQWLAVREHLQKNLWLAPLELMQPYLETFTTDK----------AA 1190 Query: 1066 KARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQR---FLLPLFRFNQS 1122 + ++ + + + + D+ ++ LWR I L PL ++ Sbjct: 1191 DKQAALVRDWIHDDSHKNDDGDL-WRHLWRGNENILAANIAAALATHAPLLQPLLEHGET 1249 >UniRef50_B7JDU3 ATP-dependent helicase/deoxyribonuclease subunit B n=77 Tax=Bacillus RepID=ADDB_BACC0 Length = 1171 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 126/974 (12%), Positives = 278/974 (28%), Gaps = 166/974 (17%) Query: 60 IDFPLPASFIWDMFVRVLPEIP-----KESAFNKQSMSWKLMTLLP-----QLLEREDFT 109 I + +P + ++ + F+ ++WK++ + + E Sbjct: 35 ILYLVPEQMTFQTQQALIGSEDVRGSIRAQVFSFSRLAWKVLQEVGGASRLHIDEAGVHM 94 Query: 110 LLRHYLTDDSDKRKLFQ-----------LSSKAADLFDQYLVYRPDWLAQWETGHLVEGL 158 LLR + D +FQ L S A+ F +Y V + W+ Sbjct: 95 LLRKIVESRKDGLSVFQKAAEQNGFFEHLGSMIAE-FKRYNVTPSNVYEMWQQLDAHSSS 153 Query: 159 GEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSR-------V 211 E Q L + + QL + RA L +++++ + LP V Sbjct: 154 AE----QKLLANKVYD--LQLLYDDFERA-LIGKYLDSEDYLQLLVEKLPQSEYVKGAEV 206 Query: 212 FICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFED 271 +I G + P L+ ++ L Sbjct: 207 YIDGFHSFSPQELEIVRQL------------------------------------MICGA 230 Query: 272 RELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTP 331 R E ++ + L + + ++++ Sbjct: 231 RVTITLTIDEKTLAQPVNELDLFYETTL----------TYEKIKQVAREEKIE------- 273 Query: 332 DNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP--LDSSITFHVCHSPQREVEVL 389 I+ I +E + RP + ++S+T H + + EVE + Sbjct: 274 ------IEKTIPLMEQPRFHSPALAHLEMHYEARPNEKFHGEASVTIHTAANLRAEVEGV 327 Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 + ++ + RDI V++ + +SY ++ +F +P+ I ++R HP Sbjct: 328 AREIRRLVA-EENYRYRDIAVLLRNGESYYDVMRTLFTDY----NIPHFIDEKRPMSHHP 382 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAA---RFDITEEGLRYLRQWVNESGIRWGI 506 ++E S L + + + V + +L R + E + + G++ G Sbjct: 383 LVECIRSALEIISGNWRYDAVFRCVKTELLYPLDVRKETMREEMDEFENYCLAYGVQ-GK 441 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 + G+ E V + G + Sbjct: 442 RWTSEDPWMYRRYRSLDDTNGMITDSEREMEEKINRLRDVVRTPVIRMQKRLKRAGTVMQ 501 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 + + ++ L + LE + + F D + ++ +++ + Sbjct: 502 MCEAVYLFLEELDVPKKLEALRIRAEESGDFLFATD------HEQVWEEVMSLLDTFVEM 555 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 + + LS+ D ++ L+ + + + V I + R K ++G+N+GV Sbjct: 556 LGEEKMSLSMFTDVMSTGLEALQFANIPPSLDQVLIANIDRSRLSNVKATFVIGVNEGVI 615 Query: 686 PRQLAPLGFDLMSQK---------PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 P G ++ R +++++ + + A +KLYIS Sbjct: 616 PAAPMDEGMLSDEERDVLSAAGIELAPTTRQTLLEEQFVMYQMVTRATEKLYISCPLADE 675 Query: 737 QDNSERFPSVLVQELIDYIGQSHYLPGDEAL-------------NCDESEARVKAHLTCL 783 + S ++++ + + + + V L Sbjct: 676 -EGKTLLASSFIKKIKRMFPDVIDTFITNDVNDLSRSEQISYVATPEVTLSYVMQQLQTW 734 Query: 784 HT--RMPFDPQNYQPGERQSYAREWLPAASQAGKA--HSEFVQPLPFTLPETV------- 832 + + EW +S+ + + Q L + + Sbjct: 735 KRYGFEGNLDFWWDVYNFYVTSDEWKQKSSRVLSSLFYRNRAQKLSTAVSRDLYGDKIKG 794 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI-PDTEPFILEGLSRYQINQQLLNALVEQ 891 + ++ F F Q L + R PD L R I +LL Sbjct: 795 SVSRMELFNRCAYAHFAQHGLSLRERDIFKLDAPDIGELFHAALKR--IADRLLRENRTW 852 Query: 892 DD----------------AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR 935 D L +R + + + + L + + Sbjct: 853 ADLSIKECEHLSAVVIEEIAPLLQRQILLSSNRHFYLKQKLQQIIFRTSIILREHAKSSG 912 Query: 936 QPGQSMEIDLACNG 949 +E+ G Sbjct: 913 FVPVDLEVPFGMGG 926 >UniRef50_Q04UR0 Exodeoxyribonuclease V, gamma subunit n=4 Tax=Leptospira RepID=Q04UR0_LEPBJ Length = 1131 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 191/1213 (15%), Positives = 415/1213 (34%), Gaps = 186/1213 (15%) Query: 5 YHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPL 64 S L+ + + + ER + P +I+V ST M WL + LS+ G++AN+ F Sbjct: 6 ITSLSLEDMAVELSRNILEERKNSPLHSPVIVVPSTNMKLWLNLNLSRFSGLSANLRFLY 65 Query: 65 PASFIWDMF--VRVLPEIPKESAF-NKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 + + F L P + AF ++++ K++T L + + ++ LR +L + Sbjct: 66 LEKALEEYFHLRANLDYDPFQRAFPSREATQRKILTFLIENVNSKETIFLRSFLE---NI 122 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVE------------GLGEAQAWQAPLW 169 + F LS+K L+ Y + R W+ W ++ E +Q L+ Sbjct: 123 TRAFSLSAKLTSLYKDYELNRSSWIQSWAKEKGIDIPMISRRPSPFPQEDEYYRFQKVLY 182 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 + + + + L Q F++ ++ T P + + +S L YL L++ Sbjct: 183 QKVFLNSKEPNT-------LVQFFLKEIQKDKTHSPRNFPSLHLFCLSNLADTYLGILES 235 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L + ++ + Y + + + Q + +P Sbjct: 236 LSQKDKLPIYLYQFHTGYVSNANNSLGPERWSDSQTHIALRTASVPGIIFKNLESVHTYP 295 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA 349 + N L G L DL + + +P + + +DIL Sbjct: 296 KKLATLRNIL------KGNQNCDNLQDLSQDASVRFWNAPSPYREMESAANDILY----- 344 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 + +D LT D Sbjct: 345 ----------------------------------------------RINQDHRLTYLDFA 358 Query: 410 VMVADIDSYSPFIQAVF---------GSAP-ADRYLPYAISDRRARQSHPVLEAFISLLS 459 ++V D+ Y P ++ VF A + +PY+++D +A ++ + + Sbjct: 359 ILVTDMRVYRPAVEWVFDGGILLQTKADADPIRKKIPYSLTDIKANEASLLYRGLMDFWE 418 Query: 460 LPDSRF-VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + +L L P+L + E L L + ++ SG+++ ++ Sbjct: 419 ICSGNSIDKRSLLKFLRNPLLHSNIRSNSESLSILEKLIDTSGVQYEESGREKDSFQI-- 476 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQ-SVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 GL R+ L + + + P S + L+ + +++ Sbjct: 477 ------SNGLKRIRLSSILSQETAWTKYKIAPIFLESDEHSFLLTNFWETVLKAKNDILS 530 Query: 578 LAQERPLE---EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 ++ + + ++L R L F + E L + ++++ + + Sbjct: 531 FSEGKTIRWTPDYLKTVRASLEELFEFPGKYEQEGKLFQNWSESLLEWEGIRLHNKEEGI 590 Query: 635 SLLRDELAQRLDQERISQR-FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 SLL+ Q DQ + +L G V I L PMR +PFK + +LG+ +G +P Sbjct: 591 SLLKFVTEQTFDQIPYRKGAYLTGGVTISLLQPMRPLPFKHIYILGLGEGKFPGSNDRSQ 650 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 +L + D S R+ L E + SA++ L +SY+G+++Q++ P + E+++ Sbjct: 651 LNLRKDFREEWDISHREIQESLLWETIHSAKESLTLSYVGKNLQEDKTFEPCSHLFEIME 710 Query: 754 YIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQA 813 + +A+ +K T + ++ + R + Sbjct: 711 SLQ------IKKAVELPLHSYSIKYKHTSEELKQGLVSYDF-GRVWVNGNRNDYTILDRF 763 Query: 814 GKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE 873 E + L + ++ L +F + P+ + + +L + E+S + E F L+ Sbjct: 764 QNP-KELAKTSSTPLSSGIDVKELSQFLSDPLDTYLKRKLGMYLEEEESSDYEKEIFDLD 822 Query: 874 GLSRYQINQQL---------------LNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWE 918 ++ I +++ + + R++ P FG+I Sbjct: 823 AIAETSILRKVHALMVPDLVSKESWSWDREKILQVLSPILEMERSSAKFPRSVFGKIQET 882 Query: 919 TQCQEMQQLADRVIACRQ------------------------PGQSMEIDLACNGVQITG 954 + + ++ + + +++ L I G Sbjct: 883 DLVRYLVTTSENLFEWKPIFQGGTYYPYLSLGDTGLSDSICKKMPELKVPLESGRFSIKG 942 Query: 955 -WLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL-VYCASGGNGESRLFLRKD----GEWRF 1008 W ++ DG L W S + + +L + + + + + F Sbjct: 943 EWEHVIEKDGNLYWLFSKSLEEKPSEDYLGYKDYWRTMSFPFLTGVAFASSNENFKVYSF 1002 Query: 1009 PPLAAEQAL------------------HYLSQLIEGYREGMSAPLLVLPESGGA--WLKT 1048 P +E++ YL++++ Y + + P+ P +LK Sbjct: 1003 KPRPSEESKKKNTLTLEYRIGSPSIGIEYLAKILMEYLK--TEPV-FFPRKAFLNYYLKN 1059 Query: 1049 CYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQ 1108 + LDD + A +FL+ E N + G +L+ + +++ ++ Sbjct: 1060 IQGDSKNKTLDDVFDDESAWIRFLKE-ELNEVKSGLS---SLVKLYPKTPNLILQSRIQW 1115 Query: 1109 SQRFLLPLFRFNQ 1121 ++ F P + + Sbjct: 1116 AKNFYKPFLDWRK 1128 >UniRef50_B6FV68 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FV68_9CLOT Length = 1134 Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats. Identities = 120/1021 (11%), Positives = 275/1021 (26%), Gaps = 165/1021 (16%) Query: 17 MEFIVERERLDDPFEPEMILVQSTGMAQWLQ-MTLSQ-KFGIAANIDFPLPASFIWDMFV 74 + V + L+ P ++LV Q + + ++ + GI N+D +F Sbjct: 18 LYEKVTKASLEHPETNYIVLVPEQFTMQTQKDLVMASPRKGI-MNVDVLSFGRLAHRIFE 76 Query: 75 RVLPEIPKE-SAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAAD 133 K K +L ++ + L L + K Sbjct: 77 ETGGNQRKVLDDVGKSF-------VLRKIAGDCEAEL--RVLGSNLKKTGYIGEVKSVIS 127 Query: 134 LFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRF 193 F QY + E L ++ EY + + Sbjct: 128 EFTQYDIQEETLEQMIEEVKDSSNLYYKLQDIKTIYHGFREYLREKYITG-------EEL 180 Query: 194 IETLESATTCPPGLPSRVFI-CGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIK 252 ++ L + L V + G + PV + L+ L + + Sbjct: 181 LDVLCTVVGESKILKDSVVVLDGFTGFTPVQNKLLRELFGVCKRVV-------------- 226 Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIY 312 EN + + ++ S + ++ Sbjct: 227 --------------------ITVTMEQKENPFSYKHPYQLFALSKQMVTSLITIAKET-- 264 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS 372 + + + + I R +K + Sbjct: 265 ---KTDVEEPIYLYDRP------------IYRFRENTALAFLEAHLFR-YSKEQYEKEQD 308 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 I + +P+ EV+ ++ + R+I ++ +D+++Y I+ +FG Sbjct: 309 CIQVYCAKNPKEEVDFAAQKIRNL-ARTRGYRYREIAIIASDLNTYGNQIEKIFGEY--- 364 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +P + +R+ + +E SLL++ + F E V L + ++E + Sbjct: 365 -QIPIFMDHKRSILLNSFVEYVRSLLAMVEQNFSYESVFRYLRTGLT----GFSDEEIDI 419 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 + +V GIR W M + + ++ ++ Sbjct: 420 VENYVIALGIRGYKKWQEK------------WIRRARGMEETELERINDIKERFLIQVED 467 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 + ++ + ++ + L + ++ ++E+ + + E + Sbjct: 468 VTMVLTKRNKTVSEVTKALYDFLVKEELQKKVKEYEIRFGN------DGELALEKEYGQV 521 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIP 671 + + + + + + L + L L++ ++ + V + R Sbjct: 522 YRIVIELFDKFVELLGEEQIALKEYCELLDAGLEEAKVGVIPPSLDQVVAGDIERTRIKD 581 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK---------RGDRSRRDDDRYLFLEALIS 722 K V LLG ND P + G + G + + ++ + Sbjct: 582 IKAVFLLGANDMYIPGKENAGGILSEHDRELFQKGGVVLAPGAKEKAFIQKFYLYLLMTK 641 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDY-----IGQSHYLPGDEALNCDESEARVK 777 ++LY++Y S D P+ L+Q+L I + P + L A + Sbjct: 642 PSEQLYVTYSKVSA-DGKTLRPAYLIQDLRRMYKKMEIQDADCQPDKKELTPKSGFAYLI 700 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA--HSEFVQPLPFTLPETV--- 832 L H + + +W Q +A + + L + + Sbjct: 701 EKLQKKH--EGLGTEWQELYTWYRQNPKWRKKIEQIVEACFYEKPKDGLTTRTAQRLYGT 758 Query: 833 ----PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILEGLSRYQINQQLLNA 887 + L++F A F L + R E + D + + + L A Sbjct: 759 ILENSVTRLEKFSACAYAHFLSYGLNLREREEYTFQAIDLGNIFHSAIEHFA---KKLEA 815 Query: 888 LVEQDDAERLFRRFR-----------------AAGDLPYGAFGEIFWETQCQEMQQLADR 930 RR + + + L + Sbjct: 816 EGYTWTTLPEVRREELIEESVEESIVDYGNTILYSSARNEYIIKRLKRMMRRTVWALTKQ 875 Query: 931 VIACRQPGQSMEIDLAC--------------NGVQITGWLPQVQPDG---LLRWRPSLLS 973 + EI +++ G + +V + + Sbjct: 876 LEKGDFMPGGYEISFGGASGLSTSDIALDGHGRMRLRGKIDRVDICEDEDNVYVKVIDYK 935 Query: 974 V 974 Sbjct: 936 T 936 >UniRef50_UPI00017899D8 ATP-dependent nuclease subunit B n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017899D8 Length = 1176 Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats. Identities = 148/1054 (14%), Positives = 296/1054 (28%), Gaps = 154/1054 (14%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGI--AANIDFPL 64 S + + M +E DP +++V G + + L GI Sbjct: 12 SGKSTSIRQEMIERLEHNPKGDPM---ILIVPEQG-SYEAEHALVNAGGIRGMMRAQVLS 67 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 + + + A +++ L +L + E L + Sbjct: 68 FRRLAYRVMQETGG--AAKVAISEEGKRMLLYKILRRRKEE---------LHMFGASGEQ 116 Query: 125 FQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRW 184 K ++L+ + Y + + + L + L + Sbjct: 117 HGFVGKLSELYTEMKRY---CIDASCVEEQLGQMVSGSGNSPMLRRKLEDIVTVFRDFEV 173 Query: 185 HRANLY---QRFIETLESATTCPPGLPS-RVFICGISALPPVYLQALQAL---GKHIEIH 237 + Y + + +L T + ++I G P + LQ + K + I Sbjct: 174 EISRFYMDEEDTLASLAEGVTESEYIKRADIWIDGFHGFTPQEYRVLQEIIVHAKRVTIA 233 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 L P R E + + + + + Sbjct: 234 LTLDKP------------------YRNGTVPHELDLFHPTAVTYIKLKGIIDEIGLEAEH 275 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 +L L F + +L +++ + + R + Sbjct: 276 RIL------------------HPDVLPRFQESP---MLAHLERGY-DRKKRWAEPDEGPD 313 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + S N+ + H + E+E +L + ++ R++ V V ++ Sbjct: 314 TASSPNR-----GRKGLLLHAASHRRAEIEGALREMLRL-AQEEGARYREMAVFVRNMGD 367 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 Y + +F +PY + +R+ HP++E S L + R+ EDV + Sbjct: 368 YEHLMGPLFREY----GVPYFLDQKRSELHHPLVEFIRSALDVIGRRWRYEDVFRCVKTD 423 Query: 478 VLAARFD-ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 +L +T E + L V SGI+ D +P+ + G + + Sbjct: 424 LLLPLDGSLTREDMDRLENHVLASGIQGTRWTDGRPWKGVPSL---SLEEGESEIRNQDG 480 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 M + + + + + + + A LE Sbjct: 481 MAAIEYARKVITEPLHAFEKRMKKAASATDQSTAVYRLLEECAVPEKLELLSRA------ 534 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 A E + ++ + + + + L L L + +++ + Sbjct: 535 ALDAGRPEEAREHRQVWGAVLGLLDQIVEMMGAEKLSTELFTGVLGTGLTEMKMALVPPS 594 Query: 657 -GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR--------- 706 V I ++ R+ K LLG+NDGV P Q G ++ DR Sbjct: 595 LDQVLIGSMDRTRTGGVKYAFLLGINDGVLPAQFQDDGILTEPERVHLEDRGLELAPSIS 654 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG---------- 756 R D+R+L AL SA ++L++SY + PS +V+ L Sbjct: 655 RRLLDERFLIYNALTSASKQLWVSYPAADD-EGKPLLPSEVVRHLKLMFQLEEEPLFPRP 713 Query: 757 ---QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQA 813 QS A+ D++ A + L + + P + Sbjct: 714 HAGQSALEQEGYAVRPDKTLAYLAGRLRDWRNGEEIPDLWWHVYNWYAEQPGLRPRLTTM 773 Query: 814 --GKAHSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSE- 863 ++ +PL + + ++RF A P F L++ R Sbjct: 774 LSSLSYRNEARPLKLETSRQLYGTKLRTSVSRMERFVACPFSHFASHGLKLRERQLYRLQ 833 Query: 864 IPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRA--------------AGDLPY 909 PD LS + Q + AE R A Y Sbjct: 834 APDIGQLFHAALSSMAVKFQSQHRSWGDLTAEECLREAEATVDRLAPMLQGEILLSSKRY 893 Query: 910 GAFGEIFWETQCQEMQQLADRVIACRQPG-------------QSMEIDLACN-GVQITGW 955 G + L ++ + + +L ++I G Sbjct: 894 GYISRKLKNIVGRASVILGEQARRGKFEPIGLELDFGPGKPLPPLAFELPNGTKMEIVGR 953 Query: 956 LPQVQPDG-----LLRWRPSLLSVAQGMQLWLEH 984 + +V +LR S + + Sbjct: 954 IDRVDMARGEHGIMLRVIDYKSSQKDLRLHEVYY 987 >UniRef50_C4G1J6 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G1J6_ABIDE Length = 1133 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 132/995 (13%), Positives = 285/995 (28%), Gaps = 168/995 (16%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQ--MTLSQKFGIAANIDFPLPASFIWD 71 L + +E +P + ++V Q + + LS+ I NID + Sbjct: 15 SELCFNKIVKEAEKNPDKNYFVIVPEQFTLQTQKDLVRLSRAKAI-MNIDVLSFMRLAYR 73 Query: 72 MFVRV-LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSK 130 +F + + E K + KL+ L + L + + ++ K LS Sbjct: 74 VFEELNIKERLILEDTGKNMVIRKLLGGLKEELCFYKNAVGK---QGFTEDLKSL-LSE- 128 Query: 131 AADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLY 190 F QY + PD L + + L A +++A Y + Sbjct: 129 ----FMQYGIT-PDNLTKIKEKTSSPVLAAKLQDAALVYRAFNNYKKEKYISA------- 176 Query: 191 QRFIETLESATTCPPGLPSRVFIC-GISALPPVYLQALQALGKHIEIHLLFTNPCRYYWG 249 ++ +E L + + L + V G + PV L+ + L E L Sbjct: 177 EQILEVLANEISRSKLLENSVICFDGYTGFTPVQLKVIDLLLVKAEHLLFTLTVSE---- 232 Query: 250 DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD 309 D + + + L +D Sbjct: 233 ---------------------------------KDYYSEEDEKFRLFH--------LSKD 251 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 I ++ L + ++ VT + R + P+ Sbjct: 252 TINKINKLAGERGVEVARPVT---------------AEFCGKVKALSLLERQIFRYPVKK 296 Query: 370 LD--SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 D +S+ +VC +P+ EVE L +L+++ D L RDI V++ D++ Y + Sbjct: 297 TDSENSVRINVCKNPREEVERLIPDILSLV-RDEGLRYRDIAVVLGDMEEYGEMV----V 351 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + + +P + ++ +P +E + L + + F + V+ L ++ Sbjct: 352 DTLSSKGVPCFLDSKKTIADNPFVEYIKASLLVVEENFSYDAVMRYLRSGF----ANVDV 407 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + ++ GI+ Q ++ + Sbjct: 408 YEVDIFENYILRRGIKG------------FRRYQTSFIKDEASEEESISEGLRVTLVDEF 455 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 P + + L + E L + + Sbjct: 456 KPLYDILKSKKSKAE---DFVKALYEFVSASGSEERLMKLSADFEE------KGKMIAAR 506 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMP 666 + ++ + + + + R L + + + I + Sbjct: 507 EYAGCYRIVMSVFEKMYELLGDEKLSIEEFRSILESGFSEGKAGFIPPGLDQIVIGDVER 566 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK---------RGDRSRRDDDRYLFL 717 R KV+ LG N+G P+ + G ++K K + R +++ Sbjct: 567 TRLKDIKVLFCLGFNEGKVPKSVGARGIITDTEKEKLAGMNVELAPTAKERAFREQFYIY 626 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN-----CDES 772 ++LY+SY ++ + PS ++ L Q E ++ + Sbjct: 627 MLFSKPTERLYVSYSSSNM-EGKPIKPSSVINRLRAVFKQEIVSEPTEEVSLINEIRKDG 685 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ-AGKAHSEFVQP-LPFTLPE 830 + N Y + KAH ++ + L Sbjct: 686 GMELILSAIKKRDLKDSTVINLIKYYNCHYDDRYNKIIEGTVSKAHGNSLEKYIATELYG 745 Query: 831 TV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 + + L+ F + F + L++ R E F L+ + I ++L Sbjct: 746 ELKGSVTRLELFSSCAYAHFIKHGLRLKERKE---------FELKPMDIGNILHEILERF 796 Query: 889 ------------------VEQDDAERLFRRFRAAGDLPYGAFG-----EIFWETQCQEMQ 925 E AE + F D+ +F + ++ Sbjct: 797 AKKVVEKGESFNSISEETREAIQAESIAEAFNYGDDIFNASFRNNYRLTRLKRITDRAVR 856 Query: 926 QLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ 960 + ++ + + E + G + G + ++ Sbjct: 857 TVLTQIKSGLFTPVAFEEEFVTKGFK--GRIDRID 889 >UniRef50_C6JEU6 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEU6_9FIRM Length = 1124 Score = 328 bits (841), Expect = 6e-88, Method: Composition-based stats. Identities = 139/1033 (13%), Positives = 276/1033 (26%), Gaps = 178/1033 (17%) Query: 19 FIVERERLDDPFEPEMILVQSTGMAQWLQ--MTLSQKFGIAANIDFPLPASFIWDMFVRV 76 V RE ++ P I+V Q + + + GI NID + +F Sbjct: 20 ERVIRESMEHPERNYYIIVPEQFTMQTQKTLVEMHPGKGIL-NIDILSFERLAYRVFEET 78 Query: 77 LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFD 136 + K +SM +L +++++ L YL +K F Sbjct: 79 GGDNRKVLEDTGKSM------VLQKMVQQHRKEL--AYLGSQMNKPGYLDEVKSLVSEFM 130 Query: 137 QYLVYRPDWLAQWETGHLVEGLGE-AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIE 195 QY + R + LA+ + + L E L+++ E+ + ++ Sbjct: 131 QYDI-REENLAEMKEKAQNQPLLEMKLKDVGILYQSFREFLKGHYMTG-------EEVMD 182 Query: 196 TLESATTCPPGLPSRVFIC-GISALPPVYLQALQAL---GKHIEIHLLFTNPCRYYWGDI 251 L L F+ G + P+ + L+ L I + + Sbjct: 183 VLLKQLPFSEKLKGAEFLFDGFTGFTPIQVNVLRELLVIADRISVTV------------- 229 Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYI 311 + + G P + + I Sbjct: 230 ---------------------------------TMDEREDAFSPGKPYQ--LFFMSKQMI 254 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 L+ L E ++ + + A A +E+ K Sbjct: 255 RALAGLTRDLEDPVYLKPSGQSRFAQ-----------APALQFLEKNIFRYRKGVYAEEQ 303 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 I SP E+ R+ ++ +I V+ +++ Y+ VF A Sbjct: 304 QEIKIFTAPSPLEEMREAARRMSELVRTC-GYRYGEIAVITGNLEEYARLAAQVFEEAD- 361 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +PY I ++ + +P +E + + + F E V L + ++T E Sbjct: 362 ---IPYFIDEKHSVMMNPFVEYLRAAMEMAVQGFPYESVFRYLRCGMS----EVTREQAD 414 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 L +V GIR W R+ G E Q + + Sbjct: 415 KLENYVLALGIRG----------------YKKWSEKWVRVYRGMGAEKIQELNEIREIFA 458 Query: 552 ESSGLIAELVG----HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 E +A+ G + L + + W + R D E Sbjct: 459 EEVRELAQGFGSGKKTVEEYCRILYEFIQKSDV------WQKLKRQERKFKESGDKAMEK 512 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMP 666 I ++ + + + V R L L Q +++ + V + + Sbjct: 513 EYNQIYGIVMDLLDKMVEILGEETVNRQEFRQLLESGLSQAKVALIPPSIDQVMVGDMER 572 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK---------PKRGDRSRRDDDRYLFL 717 R K + +G+N+G P+ G + G + + R+ Sbjct: 573 SRLKEIKALFFVGVNEGNIPKSTQTGGILSELDRDFFQEQGVELAPGPKELMNMQRFYLY 632 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE------------ 765 + +KL +SY + + P+ L+ + + G Sbjct: 633 LNMTKPGEKLILSYSDTNAK-GEGISPAYLIGSICSLYLKLEIEGGAGVRPHKNSINNYC 691 Query: 766 -ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY--AREWLPAASQAGKAHSEFVQ 822 N + L + D + + W + + VQ Sbjct: 692 YPENPEAGIDLFLEKLVQETEKEHEDIREQADETDAMFGELYSWYLRNPEYRSRVQKLVQ 751 Query: 823 PLPFTLPETV----------------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP- 865 PE + L+RF A F Q +++ R E P Sbjct: 752 SAFAGKPEDIISQSVAKALYGEVSPYSATRLERFAACAFAHFLQYGMKLTERVEYEFKPM 811 Query: 866 DTEPFILEGLSRYQ-------INQQLLNALVEQDDAERLFRRFRA-------AGDLPYGA 911 D + E L + + L + A+R A Sbjct: 812 DMGNVMHEALESFAEEVRKRGMKWTELTEQERNEIADRCLDNIVADYGNTVLKSSARNEY 871 Query: 912 FGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSL 971 E + + L ++ + E+ + + ++ + + Sbjct: 872 MIERTRRILRRTVWALQKQLEQGEFQPEGFEVTFGGGRI---DRVDIMEDQNKVYVKVID 928 Query: 972 LSVAQGMQLWLEH 984 + Sbjct: 929 YKTGNTSFDLVYL 941 >UniRef50_B1I494 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Peptococcaceae RepID=ADDB_DESAP Length = 1165 Score = 328 bits (841), Expect = 7e-88, Method: Composition-based stats. Identities = 142/1082 (13%), Positives = 285/1082 (26%), Gaps = 193/1082 (17%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID--FPLPASFIWD 71 + + + P + LV Q + L+ G++ W Sbjct: 19 LEEIRKELRQAPDGPPL---VFLVPEQATFQT-EYALALTPGLSGMFRAQVLSFRRLAWR 74 Query: 72 MFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL------- 124 +F V P + + +L L ++ +L Sbjct: 75 VFSEVGGAAR------------------PHVGDVGKRMMLARILARRRNELRLFGRAAGQ 116 Query: 125 FQLSSKAADLFDQ---YLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 + S A + + YLV P+ L Q ++ G E + QA L + L + Sbjct: 117 YGFSGTLAGVLSELKTYLVT-PEALEQ--AVRMLPGTAETDSLQAKL-EDLRLLYTDFER 172 Query: 182 PRWHRANLYQRFIETLESATTCPPGL-PSRVFICGISALPPVYLQALQAL---GKHIEIH 237 + ++ L + P L + V++ G + P L+AL + + Sbjct: 173 ELAGKYIDPDDYLTLLAARLGESPTLRAAEVWVDGFAGFTPQEYAVLEALLKAAARVNVA 232 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 L DP + Sbjct: 233 LCL------------DPRSGRREDLE---------------------------------- 246 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 ++ RD L++L ++ V +++ A ++E Sbjct: 247 -----LFQVTRDTRARLAELARKNGVELERPVELAGPPARFRAN--------PALAHLER 293 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + ++ S + EVE +L + + RD+ ++V ++ Sbjct: 294 EFFRRPTKKFAGPPENLRLVAAASRRAEVEGAAREILRL-SRERGWRWRDVSLVVRNLAD 352 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 Y + VF +P I +R + HP++E S L + + V L Sbjct: 353 YHELVATVFADY----GIPCFIDRKRPVRHHPLVELIRSALETVTENWTYDPVFRYLKTD 408 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGI-----DDDNVRELELPATGQHTWRFGLTRML 532 ++ + L +V GI+ D R L + Sbjct: 409 LVPVSRG----DVDLLENYVLAHGIKGAKWADPEDWHYRRSDALNRPVPNGTGAPAPSDR 464 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 Y E + + + G + L L L +EEW Sbjct: 465 DRYLREKVNRIRRRAARHLLDFQRRVQAAGTVRELTAALYDLLSDLDVPGRIEEWSR--- 521 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 A E + ++ + + +A+ L +D +++ Sbjct: 522 ---EAETEGRLEAAREHRQLWDGVVELLDQVVETLGDEALTPEEYGRILDSGMDGLQLAL 578 Query: 653 RFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP---------K 702 A V + +L R+ + +LG+++GV P + G ++ Sbjct: 579 IPPALDQVLVGSLERSRNPDIRAAFVLGVSEGVLPGRHGGTGLFTDREREVLLAAGLEVA 638 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 R + +++YL AL A L++SY + PS ++ L + Sbjct: 639 PDTRRKVYEEQYLVYIALTRAGHYLWVSYPLADE-EGGALAPSSVIPRLRELFPGLREET 697 Query: 763 GDEALNCDESEARVK-------------AHLTCLHTRMPFDPQNYQPGERQSYAREW--- 806 A + L + + DP + + W Sbjct: 698 LALEPEGTAPGADLPYVTAPGRTLGFLVTRLRDWKSGVTVDPVWWSVFNWFAAHAGWRER 757 Query: 807 ----LPAASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQVNFRTE 860 L + + P + + L+ F P F + L++ R Sbjct: 758 CAPVLAGLFYENREPRLDPELTPELYGSRLVVSVSRLEEFRGCPFAHFARYALRLKERDV 817 Query: 861 DS-EIPDTEPFILEGLSRY-------QINQQLLN----ALVEQDDAERLFRRFRAAGDLP 908 PD F L + + L + E L + ++ L Sbjct: 818 CRLAAPDIGLFFHAALKTFEDRLREAGMEWDALESADCTRLASAVVEELAPQLQSEVLLS 877 Query: 909 YGAFGEI---FWETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQ 951 + + +A R ++E+ V+ Sbjct: 878 SPRLRFLTGKLERVVERTAGVMAAHARHSRFQPVAVEVAFGPGRDVPGPAYPLPGGGSVE 937 Query: 952 ITGWLPQV---QPDGLLRWRPSLLSV-------AQGMQLWLEHLVYCASGGNGESRLFLR 1001 + G + +V D R L+ G E+ Sbjct: 938 LAGRIDRVDVAHTDNAAYLRVIDYKAGPRSLALDDVYYGLNLQLLVYLEAGLREAAALAG 997 Query: 1002 KD 1003 ++ Sbjct: 998 RE 999 >UniRef50_C0GDI4 ATP-dependent nuclease subunit B n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDI4_9FIRM Length = 1147 Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats. Identities = 161/1076 (14%), Positives = 302/1076 (28%), Gaps = 169/1076 (15%) Query: 14 EALMEFIVERERLDDPFEPEMI-LVQSTGMAQWLQMTLSQKFGI-AANIDFPLPASFIWD 71 + +P P +I LV Q ++ L+Q G + Sbjct: 15 TQRCLQSIAHYSKTEPMGPPIIFLVPEQATFQ-MERELAQMCGGGTFRAQVLSFRRLAYH 73 Query: 72 MFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF--QLSS 129 + P S +Q + +L+ L + + ++ F QL+ Sbjct: 74 LLQSKGGLPPVMSELGRQMVLRRLLQESQAELT----------IFGRAAQQPRFCEQLAV 123 Query: 130 KAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANL 189 + +L + YLV P+ L L L + + R A Sbjct: 124 QIREL-NNYLVS-PEMLKNQAASPETGE---------ALRSKLSDLSTVFAAYRTFTAGS 172 Query: 190 YQRFIETLE--SATTCPPGLPS--RVFICGISALPPVYLQALQAL---GKHIEIHLLFTN 242 + +TL +A LP+ RV++ G + P Q L AL +H+E+ L Sbjct: 173 FMDPEDTLAILAAAVEEGALPAGTRVWVDGFAGFTPQEFQVLSALFSTAEHVEVALCL-- 230 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS 302 DP ++ ++ +P L Sbjct: 231 ----------DPRHIPAQPQED-----------------------------ELFHPTL-- 249 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 + L L + A L Q+ E V Sbjct: 250 ------ETYLQLRRLVGEAGVPAL--PPEQLPLDEKQTRFAHSEALQVLEAGFGRLPVES 301 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 R + I + EVE + +L ++ + RDI +++ D Y + Sbjct: 302 YPREAEE----IRLVTAAGTRAEVEAVACDILHLV-REKGWRFRDIGMILRDFSRYHDLV 356 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 A+F +P+ + +RR+ HP++E S L + F E VL LL +L Sbjct: 357 AAIFQEY----QIPFFVDERRSATHHPLVEFLRSALDAAQANFALEPVLQLLKTDLLP-- 410 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVR-ELELPATGQHTWRFGLTRMLLGYAMESAQ 541 I+ E L + GIR D L + + + + Sbjct: 411 --ISRETADKLENYARAHGIRGSRWLDGKPWSFRLRLSLDESRDTATETDAHLEEINEGK 468 Query: 542 GEWQSVL-PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + + P++ G A A + E L+ W Sbjct: 469 TVFGRIFTPFNRQVGGSARPA---ADFCRAIWALLESTDAELQLQNWSEE---------D 516 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPV 659 + T A + ++ + + + L L L+ + V Sbjct: 517 ANPATAAQHRQVWSGVVELLEQIVSTLGERQISLQEFSQILQAGLEALTLGLVPAGLDQV 576 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR---------GDRSRRD 710 + ++ R + +LG+++G +P +L G ++ R + Sbjct: 577 IVGSVERSRQPRLRAAYVLGLSEGDFPARLKEEGLLADEEREALQENGVDLAVTKRQKLF 636 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 ++YL AL + + L++S + + PS L L + + + Sbjct: 637 HEQYLSYIALTRSSEYLWVSCPLADE-EGKAKRPSALFNRLRETFPYNDVHFFGNTPDSK 695 Query: 771 ESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK------------AHS 818 E + + G + A + Sbjct: 696 EDLHALAGAEKSAAALLLQAGGVAAGGAMSDFWAAAYNEALSIPQVYNRMRMLWPSLTER 755 Query: 819 EFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIPDTEPF 870 + PLP + + L++F P F + L++ R E E P+ F Sbjct: 756 NHIAPLPAETVLEILGTELKSSVSRLEQFARCPFAHFARYVLRLQERHEFRVEAPEMGNF 815 Query: 871 ILEGLSRYQ-------INQQLLNALVEQD----DAERLFRRFRAAGDLPYG---AFGEIF 916 L + ++ L Q E L R + L E Sbjct: 816 FHHALRLFAESLQAEGLDWAQLETEEAQARMNSIVEELIPRLQGEILLSSARMRYLAERL 875 Query: 917 WETQCQEMQQLADRVIACRQPGQSMEIDLACNG---VQITGWLPQVQPDGL---LRWRPS 970 ET Q + L + + ++E+ Q+ Q++ G + + Sbjct: 876 KETLAQAVAALTEHARRSQFKTVAVEMSFGSGKTPAWQLRCGQTQLKLYGQIDRIDLAEA 935 Query: 971 LLSVAQGMQLWLEHL-------VYCASGGNGESRLFLRKDGEWRFPPLAAEQALHY 1019 + + V+ + L + K+ F L AE A Sbjct: 936 EGKAWLRVIDYKSTPIELKLSDVWHGLSLQLLAYLAVVKENARAFSALPAESAGAL 991 >UniRef50_B2A611 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=ADDB_NATTJ Length = 1186 Score = 325 bits (833), Expect = 6e-87, Method: Composition-based stats. Identities = 165/1132 (14%), Positives = 327/1132 (28%), Gaps = 205/1132 (18%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAA--NIDFPL 64 S + + + ++ DP + LV Q ++ + ++ I+ + Sbjct: 12 SGKTSYIIDSITEQLKAAPDGDPI---IFLVPEQATFQ-MEQAILRRSDISGFSRLHILS 67 Query: 65 PASFIWDMFVRVLPEIPKE-SAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRK 123 + + S K+ + ++ L ++D +L Sbjct: 68 FQRLSQKVLEEQGGIAKADLSDTGKEMIIKNIL-----LQRKDDLEILEKVAVKSG---- 118 Query: 124 LFQLSSKAADLFDQYLVYR--PDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 S K + L + +Y P+ L Q + L + + + + Sbjct: 119 ---FSEKLSRLISEARMYEITPEMLEQISQELDLIHLKQKL-------QEISQVFTDYET 168 Query: 182 PRWHRANLYQRFIETLESATTCPPG-----LPSRV-FICGISALPPVYLQALQALGKHIE 235 H+ +Q + L A G L +I G S P L+ L+ L Sbjct: 169 FLQHQGYHHQE--DRLSKAGQKMEGNNISFLAGSTCYIDGFSGFTPQELKLLEGLLTKCS 226 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 L + G I D +L + +E ++ ++ + Sbjct: 227 NIELALTLPPQFTGKIDDELHLFHPTLKTYNQVWELAVNNDIEIKKSKHFPNENEEHR-- 284 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 S+ L F D A ++ Sbjct: 285 -----------------------SASSLPRFKDNP--------------------ALAHL 301 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 E+ + P D + ++ + + E++ + + +L D + +DI V+V ++ Sbjct: 302 EKEWGKNKINPYDSEPTGLSIVEGTNLRNEIDKIAREI-KLLVRDHGMRYKDIAVIVREL 360 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 +SY P I+AVF +P+ + + HP++E S + S + E + +L Sbjct: 361 ESYEPVIKAVFNDY----KIPHFLDRKEPVHHHPLVEFLRSSVETVISNWDYEPLFRMLK 416 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF--------- 526 +L I+ E + + +V GI G D + A Sbjct: 417 TGLLP----ISSEEIFQVENYVLAHGIS-GKDWKKQGKWNFIANFDLERENIAPSNRNKQ 471 Query: 527 ---------GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL--ASLLMQLNIWR 575 G R L +G +S + AE L + L Sbjct: 472 YLSEINSIKGKVRDTLLEFDSKLRGINKSESLSAQFKNQEAEEDNLLSVREISTYLWELI 531 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 L E LEEW L A D + ++ + + V LS Sbjct: 532 EQLQIEYQLEEWS------LEAEERKDFVEMQLHNQLWDTVIDLLDQMVTFLGEQKVTLS 585 Query: 636 LLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 + L ++ V + T R KV+ + G++DG+YP ++ G Sbjct: 586 EYLQIIESGLANIKLGLLPATLDQVLVGTADRSRYHEIKVLFMAGVSDGLYPAKIDDDGI 645 Query: 695 DLMSQKP---------KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 ++ + ++YL L QKLY+SY + PS Sbjct: 646 IDDRERITLRQHDVEFAPTTEQKLYQEQYLIYNVLTQPSQKLYLSYPAAD-SEGRTMSPS 704 Query: 746 VLVQELIDYIGQSHYL-PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 ++ ++ + + D N ++ + + + + P + + Sbjct: 705 TIISDIQEMFPELFQEYQNDGPENDEDFRQYIIDGKKAVSNLIKLINKVGHPEKLAEDKQ 764 Query: 805 EWLP-----------------AASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPV 845 + L A + + P + + L+ F P Sbjct: 765 QLLAYLINEHPDLFYSTPEIKALDYKKSLSPLTQEVIDKLYPNKIATSVSGLESFCQCPF 824 Query: 846 RAFFQMRLQVNFRTEDSEIPDT-EPFIL------------EGLSRYQINQQLLNALVEQD 892 R F + L++ R P + F L+ +++ + ALV + Sbjct: 825 RHFAEQNLRLKEREYFRLEPASLGLFYHAGLKLFWDKLQENNLTWHKLKTEEREALVSEI 884 Query: 893 DAERLFRRFRAAGDL---PYGAFGEIFWETQCQEMQQL-------------ADRVIACRQ 936 E L R + L Y F + E + ++ L ++ + Sbjct: 885 -VEVLSERLKNRILLASERYKYFKKKLHELLSRAVEVLSWYSDDKGFYPVGSEIGFGKDE 943 Query: 937 PGQSMEIDLAC---NGVQITGWLPQVQ---PDGLLRWRPSLLSVA-------QGMQLWLE 983 P ++E++L VQ+ G + ++ DG L R Sbjct: 944 PLSTLELELPSFPNKKVQLKGRIDRIDTGKKDGDLYLRVIDYKGKSKNLELRDLYYGLDL 1003 Query: 984 HLVYCASGG------------NGESRLFLRKDGEWRF--PPLAAEQALHYLS 1021 L + L+ + P++ QA L Sbjct: 1004 QLAAYMTVAMRNSDKLTGDQMFPGGMLYFGVENPVVPTDKPVSPAQARDKLK 1055 >UniRef50_C0FS44 Putative uncharacterized protein n=2 Tax=Roseburia RepID=C0FS44_9FIRM Length = 1143 Score = 323 bits (827), Expect = 3e-86, Method: Composition-based stats. Identities = 128/1035 (12%), Positives = 289/1035 (27%), Gaps = 163/1035 (15%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQM--TLSQKFGIAAN 59 L+ N + + + +E + P + ++LV Q + L + I N Sbjct: 3 LQFIFGNSGSGKSSYLYRNILKEAAEHPEKNYLVLVPEQFTMQTQRELVRLEKSHAI-MN 61 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 +D A + +F + + + +++ + + ++++ ++L L Sbjct: 62 VDVLSFARLAYRVFDELGKQNLRVLEETGKNLVLRKLAG----EQKKNLSVLGGNLNRMG 117 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 ++ L ++L QY V ET + E L + ++ + EY Sbjct: 118 YISEVKSL---ISEL-TQYNVSPEKLDTFLETEDVGETLRLKMQDISVMYHSFSEYLQGQ 173 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFICG-ISALPPVYLQALQALGKHIEIHL 238 + + L A + V + + P+ Q L+ L E + Sbjct: 174 YITS-------EEVLSLLCDAAEDSNIIKDSVIVFDEFTGFTPIQNQLLRKLLVLSERII 226 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 + Sbjct: 227 VSVT-----------------------------------------MDAGEDFYHCRGEQE 245 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVT-PDNLLHNIQSDILELENRAVAGVNIEE 357 L + + + + +L + + V D H ++ A + +E+ Sbjct: 246 LFS----MSKKTVSVLMKMAEELHVTVEEPVVLSDGKNHRYKN--------APSLYFMEQ 293 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + + +P+ E+ + + + + +DI V+ D+ Sbjct: 294 NLFRPYYHKWRQKEDELRIVSLKNPREELHFVAREITKFV-REKQYCYKDIAVVTGDVSL 352 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 Y ++ +F + +PY + R HP +E ++L + + F E V L Sbjct: 353 YDNYVDEIFAAYD----IPYFLDQTRTILFHPFIEFIRAVLEVVELDFSYESVFRFLRCG 408 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + DITE+ + L +V GIR + T + + Sbjct: 409 LT----DITEQQIDLLENYVLAKGIRGRKKWEKQWTFVFDDTEKENLTE------MNEVR 458 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 E G + + + + L L+ +L + L Q+ L Sbjct: 459 EKIYGFFAPLSEAFTQGKTVRDETTVLYELIEKL-EIEQKLKQKE------------LEF 505 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA- 656 + I + + + + + +P+ D L + R+ Sbjct: 506 ERQGNQVKAKEYAQIYKIVMDLFDKVVDFLGDEVLPVKEYADILDAGFEAARVGVIPPGN 565 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK---------RGDRS 707 V I + R K++ +G+NDGV P+ G ++ K G R Sbjct: 566 DKVTIGDIERTRLNHIKILFFIGVNDGVVPKAGNAGGIISQFEREKMVACHLELAPGARE 625 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 + R+ + LY+++ + D S V L+ + +E Sbjct: 626 KVFIQRFYLYLNVTKPSDFLYVTFSKVNA-DGKALRRSYFVGTLLKMFPEKTVEEIEETT 684 Query: 768 NCD------ESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFV 821 + D S A L F + + ++ +L + + Sbjct: 685 SADCIMTPKSSMAFFLEGLQDDDRASDFSQVEKRKL-WNALSKFYLTDSEWKPETEKLLK 743 Query: 822 QPLPFTLPETVP---------------LETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIP 865 E + + L+RF A + L++ R Sbjct: 744 TAYEVHSDEPISHAVTQALYGTVLENSVTRLERFAACAYAHYLNYGLRLKERQLLEFASV 803 Query: 866 DTEPFILEGLSR------------YQINQQLLNALVEQDDAERLF--RRFRAAGDLPYGA 911 D + L + I + + +E+ + + + A ++ Sbjct: 804 DMGNIYHDALEHFSRRVEKSEYTWFNIPEDVQETFIEESMNDAIAGCKNAGAFENVRNRY 863 Query: 912 FGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQITGWLP 957 +T + + L ++ + E+ + + G + Sbjct: 864 LTGRMRQTIKRTVWALTTQIQKGKFVPSDFEVSFSRADKLDAIRFQLSDEEKMNLLGRID 923 Query: 958 QVQPDGLLRWRPSLL 972 +V + Sbjct: 924 RVDTYETSDKVYVKI 938 >UniRef50_A4J4E2 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Desulfotomaculum reducens MI-1 RepID=ADDB_DESRM Length = 1155 Score = 322 bits (824), Expect = 6e-86, Method: Composition-based stats. Identities = 142/1002 (14%), Positives = 287/1002 (28%), Gaps = 167/1002 (16%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLS---QKFG-IAANIDF 62 S + + + + + + ++LV Q+ + L+ + G I A Sbjct: 12 SGKSHSCLEEVRQRLRQNQGES---SIILLVPEQATFQY-EYMLATTPELKGMIWA--QV 65 Query: 63 PLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKR 122 + + + + + +LR L + Sbjct: 66 LSFRRLAFRVLQEMGGAARA------------------HIDDLGKKMVLRRILEQRKSEL 107 Query: 123 KLF-------QLSSKAADLFDQYLVYR--PDWLA---QWETGHLVEGLGEAQAWQAPLWK 170 K+F + A + +YR P L Q + + A + L+ Sbjct: 108 KVFHRAAKQPGFADSLASALSELKLYRIEPQELQKGIQHMQEAPGSAIRDKLADLSLLYN 167 Query: 171 ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL 230 L E+ NL + + + +FI G + P + Sbjct: 168 DLEEFLSGRFTDPDDYLNLLAQRLPGSRTVQGAE------IFIDGFTGFTPQEYGVI--- 218 Query: 231 GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 + + L Sbjct: 219 -----------------------------------EQMLGTADRVHVALCFDPMYLQEPC 243 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV 350 E + P + + + L D+ + + P + E R Sbjct: 244 DELEFFYPTV--------ETYHTLLDMAGALRISL----EPPIICGK------ETPVRFQ 285 Query: 351 AGVNIEEFSRSDNKRPLDPLD--SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 I + + PL D ++ C + + EVE ++ + + L+ RDI Sbjct: 286 KDSAIAHLEKYYFRHPLQASDAAQGVSLVACANRRAEVEAAAREIIRL-CREEELSWRDI 344 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 +V++ D+ +YS I +F +P I ++R HP++E S L + + + Sbjct: 345 VVVLRDLTNYSDLINTIFND----HGIPVFIDEKRNVLHHPLVELIRSALEVITQHWAYD 400 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 V L ++ + + + L +V GIR G ++ R+ + Sbjct: 401 PVFRYLKTDLIPVQR----DDVDRLENYVLAHGIR-GNRWNDNRDWTYRRQYTLGEDCDI 455 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 + + ++ + S +A G++ + L L+ +E W Sbjct: 456 DDNEAEQLAQLNVVRYAAIEHINNFSKKVAN-CGNVRQITTALFELLESLSVAERMEAWA 514 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 A I ++ E + A + L L L+ Sbjct: 515 K------EAEVAGRLIEAKEHAQIWDNVILLLDEIVEAMGEQELNLEEYLQVLEAGLESL 568 Query: 649 RISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP------ 701 ++ V + TL R+ K +LG++DGV P + G ++ Sbjct: 569 KLGLIPPGLDQVVVGTLERSRNPNVKAALVLGISDGVLPARPVEEGLFSDYEREALREIG 628 Query: 702 ---KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 G R + D++YL AL A +L++SY + PS ++Q + + + Sbjct: 629 LNLAPGARRKLFDEQYLIYTALTRASSRLWLSYPQADD-EGKALMPSPVIQRVKELLPLI 687 Query: 759 HYLPGDEALN-----------CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 S + + A L DP ++ Sbjct: 688 QEEILPVEPPCLGGDLAFIANPSRSLSYLAAMLRETVAGRLVDPVWQDVYSWFVQQPQYQ 747 Query: 808 PAASQ--AGKAHSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFR 858 + + AG H LP ++ + + L+RF P F L++ R Sbjct: 748 ESCRRVLAGLYHVNQETSLPPSMGRRLYGSRLRASVSRLERFTTCPFSHFLSHGLKLKER 807 Query: 859 TEDS-EIPDTEPFILEGLSRYQINQQLLNAL-----------VEQDDAERLFRRFRAAGD 906 ++ PD F L + + L+ + + E L + + Sbjct: 808 SQFKLAAPDLGQFFHAALKLFAERIKALSLDWGQLSRGQIITITGEIVEELAPQLQNEIL 867 Query: 907 LPYG---AFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL 945 L + T + + LA+ ++EI Sbjct: 868 LSTARHRYLIKKLRRTLERAVVTLAEHARRGSFRPVAVEIGF 909 >UniRef50_A1HTK8 UvrD-like DNA helicase, C terminal n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTK8_9FIRM Length = 1160 Score = 322 bits (824), Expect = 7e-86, Method: Composition-based stats. Identities = 154/1010 (15%), Positives = 282/1010 (27%), Gaps = 170/1010 (16%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID--FPLPASFIWD 71 + + + P +++V Q + L+ G++ + + Sbjct: 19 LDAIRERLRQAPDGPPL---LLIVPEQATFQ-AERELAATPGLSGFVRAHVMGFRRLAYR 74 Query: 72 MFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQ----- 126 + P L + +LR LT+ D+ KL Sbjct: 75 VLAETGGGAA------------------PHLTDLGKRLVLRRLLTERRDELKLLGQAAAQ 116 Query: 127 --LSSKAADL---FDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 + A L F Y + PD +A L A L+KA ++ Sbjct: 117 RTFADTLASLIWEFKTYGIA-PDKVAAASERLGATPLAAKLHDLALLYKAFEDFLQGRYT 175 Query: 182 PRWHRANLYQRFIETLESATTCPPGLPS--RVFICGISALPPVYLQALQAL---GKHIEI 236 L +A L V++ G P L+AL K + + Sbjct: 176 DPED--------CLRLLAAKIPAATLTRGAEVWVDGFEWFTPQEYGVLEALLSAAKDVTV 227 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 L P D A L R + R Sbjct: 228 TLCLDEP------DAPHHADETALFHRSWKTRQSLRARA--------------------- 260 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 A G R+ + Q+ IL R Sbjct: 261 ----ARLGVSCRE--------------------EVLTAVRRFQAPILAYVERYANDAR-- 294 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 +T + + EVE + ++ + D RD+ V++ D+D Sbjct: 295 -------PPAWRGDKQGLTIAEAANRRTEVEGIARDMIRL-CRDEGYRWRDMAVLLRDMD 346 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y ++ V +P+ +R HP+ E S L + R+ E V L Sbjct: 347 GYIDLVETVLADYD----IPFFSDRQRPAVHHPLAELIRSALEVVTERWAYEPVFRCLKT 402 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 + F ++ + + L +V E GIR + + R A Sbjct: 403 DL----FPLSRDEIDLLENYVLEFGIRGSRWTKDEPWTFVRRLSLDEDAEPDER---QQA 455 Query: 537 MESAQGEWQSVLPYDESSGLIAEL-VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 + A + + L L LE+W Sbjct: 456 YLDRINAIRCRAAKPLIRFEQALTQAETVREMTAALYGLLADLDVPATLEKWAAAAST-- 513 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 D E E I ++ + + + L+ + + L+ + Sbjct: 514 ----ARDPEQEREHRQIWHSIVDLLDQIVDTCGEQPMSLTDYAAVVNEGLEGLTFNIIPP 569 Query: 656 A-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD------RSR 708 V + L R + KVV L G+NDGV P + G ++ + +R Sbjct: 570 GLDHVTVTPLTRAR-LAAKVVYLPGVNDGVLPERGREEGLLSDRERAELASLGLELGPTR 628 Query: 709 RDD---DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY----------I 755 D ++++ AL A +L++S+ + PS++++ L + + Sbjct: 629 EADVFAEQFVVYTALTRASDRLWVSFPLADA-EGKALAPSLIIRRLKELSGIEALKPLPV 687 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ--A 813 + ++ S A + A L P + + A Sbjct: 688 EPPPGAEDEYIVHPRRSLAALAAGLRPALAGQPVGTLWRDLYNWAVARPDLAADLRRAVA 747 Query: 814 GKAHSEFVQPLPFTLPETV---------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSE- 863 G H Q LP L + + + + F A P + F + L + R Sbjct: 748 GLFHRNQEQALPPELAQRLYRRQGKLRGSVTRFEGFQACPFQHFARYGLALKERAVAQLK 807 Query: 864 IPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQE 923 PD F L ++ + +E++ RR++ GD+ G + + Sbjct: 808 APDFGQFFHAALRQFGLR-------IEKELTADNQRRWQRWGDVQDEEIGPLCEAIVQEL 860 Query: 924 MQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLS 973 +L + ++ Q I V+ D R++P L Sbjct: 861 APKLQNEILLSSA--QYRSITRRLQRTLQRTVTRLVRLDRRSRFKPVALE 908 >UniRef50_A5ZW43 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZW43_9FIRM Length = 1109 Score = 320 bits (821), Expect = 1e-85, Method: Composition-based stats. Identities = 140/1008 (13%), Positives = 290/1008 (28%), Gaps = 148/1008 (14%) Query: 19 FIVERERLDDPFEPEMILVQSTGMAQWLQ--MTLSQKFGIAANIDFPLPASFIWDMFVRV 76 V RE P + ++V Q + + + + GI NID + +F V Sbjct: 20 QRVIREAAAHPEKMYYVIVPEQFTMQTQKTLVEMHPQKGIL-NIDVLSFERLAYRIFEEV 78 Query: 77 LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFD 136 + K ++M +L +L++ L+ YL + K F Sbjct: 79 GGDTRKVLEETGKNM------ILQKLVQVSQKKLV--YLKNQMKKPGYLDEVKSLISEFM 130 Query: 137 QYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIET 196 QY V + + + L A L++A EY + +E Sbjct: 131 QYEVRKEELDKMIQDASDKPLLQMKLKDVAVLYEAFREYLSDHFMTA-------EEVLEV 183 Query: 197 LESATTCPPGLPSR-VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPA 255 L L V + G + PV ++ L + E Sbjct: 184 LAKEIPFSEKLKGSTVVLDGYTGFTPVQHTVIRELLQVCEH------------------- 224 Query: 256 YLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLS 315 E + + I LS Sbjct: 225 ---------------VTVTVTMDVREQLLAKGKPHELFYMSHK-----------MIRSLS 258 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSIT 375 + + +V ++ +A A +E+ ++ + + Sbjct: 259 EFTRDMKEPIWVKAGAES-----------RFAKAPALNFLEQNLFRYHRGAYNEEQKEVQ 307 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 +P+RE+E R+ ++ + I V+ +++ Y + VF +A + Sbjct: 308 IFQAGNPEREMEETARRISRLV-REHGYRYGQIAVITGNLEEYGSIARHVFDAA----EI 362 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 P+ + ++ + +P +E + L + F E V L + D++ + L Sbjct: 363 PFFVDEKHSVLMNPFVEYLRAALEMTVQGFSYESVFRYLRCGMS----DLSRREVDILEN 418 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 +V GIR + TW M M+ + E + Sbjct: 419 YVIALGIRGFRKWN------------ETWVRIYRGMDPAVIMDLNEIREHFTEEVRELAE 466 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 + + L + +R ++E L V L+ D E I Sbjct: 467 GFSGKKKTVGEYSRYLYDFI----VKRQIQEKLKV--QELHFKQQGDRAREKEYAQIYGI 520 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKV 674 ++ + + + V R L + Q +++ V I + R + Sbjct: 521 IMDLLDKMVSILGEEVVSPEEFRQLLETGMTQAKVALIPPGIDQVLIGDMERTRLKDIRA 580 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQK---------PKRGDRSRRDDDRYLFLEALISAQQ 725 + +G+N+G P+ G + G + + R+ L + Sbjct: 581 LFFVGVNEGCIPKNTESGGILTEMDRDFLGNQGIELAPGPKELMNMQRFYLYLNLTKPSE 640 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA-------LNCDESEARVKA 778 L +SY RS P+ L++ + + H ++ + S + Sbjct: 641 SLCLSYS-RSNGKGEAVGPAFLIRTIQTLFPEIHIERAEKPEKELDLLETPNTSVGYLLE 699 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREW------LPAASQAGKAHSEFVQPLPFTLPETV 832 +LT R + + + ++ L A+ K + + + L + Sbjct: 700 NLTDEEKRKE-NQLFAELYSWYLNSPDYCTMTKKLTEAAFLRKPVDQISKSVAKALYGEI 758 Query: 833 PL---ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILEGLSRY-------QIN 881 L+RF A F + L++ R E D I + L + Q+N Sbjct: 759 SPNGATRLERFSACAFAHFLKYGLELTERAEYEFRAMDMGNIIHQALEEFAVELRQKQLN 818 Query: 882 QQLLNALVEQDDAERLFRRFRA-------AGDLPYGAFGEIFWETQCQEMQQLADRVIAC 934 + L+ A+ + A E + + L +++ Sbjct: 819 WRELSDEERDTIADNCLDKIAADYGNTILQSSARNYYMIERTRRILRRTVWALQEQLKNG 878 Query: 935 RQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWL 982 R + E+ + + L +Q + + + + Sbjct: 879 RFEPEGFEVAIGGGRI---DRLDVMQEEDRVYVKIIDYKTGNTSFDLV 923 >UniRef50_A8RRN9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RRN9_9CLOT Length = 1196 Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 135/1054 (12%), Positives = 289/1054 (27%), Gaps = 189/1054 (17%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQ--MTLSQKFGIAANIDFPLPASFIWD 71 ++ V +E ++ P + +++V Q + + L + GI NID + Sbjct: 25 TRMLYDRVIKESMEHPEQKYLVVVPEQFTMQTQKEIIRLHPRHGI-MNIDILSFKRLAYR 83 Query: 72 MFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKA 131 +F + IP +SM + + L +R +L +L + QL S+ Sbjct: 84 VFEDLGVRIPVVLDDMGKSMVLRKVAGL----KRGKLSLYSGHLEQTGF---IGQLKSQI 136 Query: 132 ADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQ 191 ++L+ QY + PD L L + ++ EY + Sbjct: 137 SELY-QYGIT-PDMLRDVRGEADSPLLAQKLEDLEVIYSGFREYIESHYITA-------E 187 Query: 192 RFIETLESATTCPPGLPSRVFI-CGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGD 250 ++ L L + + G + PV + + L + Sbjct: 188 EILDILCRELPKWEPLKDSIILLDGYTGFTPVQYRL---------VELFLMHAREVVCTV 238 Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 D A + + + R AS K Sbjct: 239 TIDSRENAYKESSIQHLFYMSRHTVCRV----------------------ASMAKQ---- 272 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 + +++ + + +E+ + R + Sbjct: 273 ----HGIPKKEDIICSRRPA-------------WRYDESPELDFLEQNLYRYSGRTWEGK 315 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 + I + +P E + R+ M+ ++ + RD V+ D+ SY + F A Sbjct: 316 EERIQVYKGRNPAGEAAYVCSRIEQMI-KEEGMRYRDAAVITGDLPSYGRELAHQFDEA- 373 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 +PY + D+++ +P++E + L + F E L ++ + TEE Sbjct: 374 ---GIPYFLDDKKSILENPMVELIRAALEMV-KDFSYESAFRYLKTGLVYDKAGSTEERA 429 Query: 491 --------------------------------RYLRQWVNESGIRWGIDDDNVRELELPA 518 L +V GIR D+ E + Sbjct: 430 AADTAADTSGDAGEADAGSGFNGSREHAEQMTDRLENYVRALGIRGWKRWDSCWERQYR- 488 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 G ++ L + + + P E+ + + L + + Sbjct: 489 --------GGEKLNLKELNQYRMWILEPLRPLREAFKAEGATIASV---TAALRQFLEHM 537 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 LEE+ L D + + + G + + Sbjct: 538 ELREKLEEYRDFF---LERKEPGDENLAREYGQVYDRVLELFERLEGLLGAEKADMKNYI 594 Query: 639 DELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 L + ++ V + + R KV+ +G+N+G P++ G L+ Sbjct: 595 QILDAGFQEIQVGVIPATVDQVMVGDITRSRLEAVKVLFFVGVNEGTVPQRK--NGGSLL 652 Query: 698 SQKPKRGDRSRRDD-----------DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 S + + R + ++ + ++L ++Y G + D + PS Sbjct: 653 SDRDRAALRKMDIELAPTVKEDGCIQKFYLYLMMSKPSRQLVLTYAGLTP-DGKSQRPSN 711 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT-----------------RMPF 789 L+ E+ L + + L F Sbjct: 712 LMGEVGKLFPGMKTLDEHSVEWPVRTGRDARELLIQGLRGMQEQGEDDREREDAAFMQLF 771 Query: 790 DPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVRA 847 R R+ + AA + + + + L++F + Sbjct: 772 QHFYTSQEHRDK-VRQLVDAAFYSYEERGIGRAAARALYGRELQGSVTRLEQFASCAYAH 830 Query: 848 FFQMRLQVNFRTEDSEIP-DTEPFILEGL--------SRYQINQQLLNALVEQDDAERLF 898 F + L++ R E D + + R Q ++L + E + Sbjct: 831 FLRYGLELMERQEYELEAVDMGNLFHQSIDRCFASMKDRGQDWRELTEEGRKSLVKECVT 890 Query: 899 RRFRAAG------DLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL------- 945 + G + + LA++V E+ Sbjct: 891 QVTEEYGNTIMSSSARNAYLAGRVERITDRTIWALAEQVKKGDFEPVGFEVSFSAIDNLK 950 Query: 946 -------ACNGVQITGWLPQVQPDGLLRWRPSLL 972 +Q+ G + ++ + Sbjct: 951 AMRIGLSEDEELQLRGRIDRMDLCRDEDHVYVKI 984 >UniRef50_C6CTT5 ATP-dependent nuclease subunit B n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTT5_PAESJ Length = 1175 Score = 319 bits (817), Expect = 4e-85, Method: Composition-based stats. Identities = 135/998 (13%), Positives = 272/998 (27%), Gaps = 148/998 (14%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDF--PLPASFIWD 71 + ++ E P ++LV Q + L + ++ I + Sbjct: 19 LDAIRAKLQGEPDGAPL---IMLVPEQATFQT-EYALLKDTSLSGTIRAQALSFRRLAFR 74 Query: 72 MFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQ----- 126 + T L + + +L + + +LFQ Sbjct: 75 VMQETGG------------------TALIPISDNGKHMMLFKIIHRLGKQLELFQSGAEQ 116 Query: 127 --LSSKAADLFDQYLVYRPD---WLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 + +L ++ Y D + + L ++ L + L Sbjct: 117 PGFIERLGELLTEWKRYGIDANLLKEKTASVEDSTLLDRKLHDLRLVYDKLEQELLGLYI 176 Query: 182 PRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL-GKHIEIHLLF 240 + + P + ++I G P AL L E+ + Sbjct: 177 DSE------DYLTQLIAGYAYAPAMQGAHLWIDGFHGFTPKEYDALGTLIASSAEVTVAL 230 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 T Y G++ L + + Sbjct: 231 TLDRPYDNGEMPHELELFHPTAETYGKLSALAAQAGVSVYDTVVLGEGAPTRFL------ 284 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 +L +++ G Sbjct: 285 ------------------------------GSTMLAHLEKHY---------GGRTPMLIP 305 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 +D ++ H + + EVE ++ + L RD+ VMV + Y+ Sbjct: 306 DKKMLAVDSPACGLSLHASANRRAEVEAAARDMVRR-AREEGLRWRDMAVMVRNAAEYTD 364 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +IQ +F +PY + + HP++E S L + E V + +L Sbjct: 365 YIQTIFDDY----EIPYFLDQKNNTVHHPLVEFIRSALETVLHGWHYEAVFRCIKTELLF 420 Query: 481 ARFD-ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 ++ E L +V +G+ G + + A Sbjct: 421 PIDGSMSRELFDRLENYVLAAGVD-GWKWLDRSRWKPFMQQSLEDEPDTVSEPSAKAKRE 479 Query: 540 AQGE---WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 Q ++++P + ++ + L LE W Sbjct: 480 FQAIMAAREAIVPPLRRFEQSLKKASNVKDMCEALYKLLDHADAADRLERWSR------E 533 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 + + + ++ + + + +P L + L+ +++ A Sbjct: 534 DSASGRTQRARSHRQLWDGVMQLLDQLVEMVGDEDMPPELFAGMVETGLENLKLAAVPPA 593 Query: 657 -GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD---------R 706 I ++ RS K+ +LG NDGV P ++ G ++ + + R Sbjct: 594 LDQALIGSMDRTRSGDVKICYVLGANDGVMPMRIQEDGVLTEQERERLAEEGLVMAPGVR 653 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA 766 R D+R+L AL +A Q L+IS+ + PS +++++ Sbjct: 654 RRLLDERFLIYNALTTASQHLWISWAQADE-EGKTLLPSEVIRQVRQLFPGIPVYQKAGE 712 Query: 767 LNC--------------DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 + A + L P + + EW Sbjct: 713 PTPGMETGDQRSYIEHPQRTLAYLITELRAWRQGSEIAPFWWDVYNWFAIRPEWQDKLQL 772 Query: 813 AGKAHSEFVQP--LPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDS- 862 + S Q L T E + + ++RF + P + F L++ R Sbjct: 773 MNASLSFSNQETVLTTTTAEQLYGTKLKASVSRMERFVSCPFQHFAIHGLRLRERQMYRL 832 Query: 863 EIPDTEPFILEGLSR--YQINQQLLN------ALVEQDDAERLFRRFRAAGDLPYGAFGE 914 E PD LSR + Q+ + + L R ++ L G F Sbjct: 833 EAPDVGQLFHAALSRLAGGVGQRWGSMPEAQIREAAAKAVDELAPRLQSQILLSSGRFQY 892 Query: 915 IFW---ETQCQEMQQLADRVIACRQPGQSMEIDLACNG 949 I E Q L++ + +E+D +G Sbjct: 893 IARKLKEIVAQAAVILSEHSRRAQFQPVGLEVDFGPDG 930 >UniRef50_Q8ERW6 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Oceanobacillus iheyensis RepID=ADDB_OCEIH Length = 1166 Score = 318 bits (815), Expect = 7e-85, Method: Composition-based stats. Identities = 142/1094 (12%), Positives = 312/1094 (28%), Gaps = 203/1094 (18%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLS-----QKFGIAANIDF 62 N+ +V+ ++ + + +V Q ++ + G + Sbjct: 13 NKSEVILKEIKQKISTNPIGP---SIFYIVPDQMTFQ---QEVALFSDSETNG-SIRAQI 65 Query: 63 PLPASFIWDMFVRVLPEIPK-ESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 + W + + S+ Q M K++ ++ D+ + L Sbjct: 66 VSFSRLAWRVLQETGGGTKQFISSVGIQMMLRKIIEE-----KQGDWNAFQKALKKQGF- 119 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 L QL + +L +Y + D + + HL + + ++ + Q L + L + + Sbjct: 120 --LGQLETMLTEL-KRYEITPDDL--RMQQSHLTDFVHQSPSEQG-LTRKLSDLIYIYET 173 Query: 182 PRW-------HRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL---G 231 + + Q I+ ++ ++ ++I G + P L L Sbjct: 174 FIYALQGTYVDSEDQLQLLIQQIKQSSILNNA---DIYIDGFHSFTPQEQSVLTELMKTS 230 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 I + L +P W + L ++ Sbjct: 231 NSITVALTLDDP----WKEDASELDLFYQPSQ---------------------------- 258 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 ++L L + + D L N Q+ Sbjct: 259 ------------------TYHVLKQLAWEAGVPVEDPIILDTLEGNFQNR---------- 290 Query: 352 GVNIEEFSRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 + + RP + I P+ EVE + ++L ++ ++ RDI Sbjct: 291 -PYFAHMEKYFDSRPAPAYEGEVPIEIFEAVHPRAEVEGIAQQVLELIRDNR-YRYRDIA 348 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 +++ + Y I+ +F LP I ++R HP++E S+L + + ++ Sbjct: 349 LLIRQPEVYHDLIETIFNDY----ELPVFIDEKRPMLHHPLIELIRSILEVVQGNWRNDA 404 Query: 470 VLALLDVPVLA---ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH--TW 524 + +L ++ F +T + + L +V E GIR + + + Sbjct: 405 IFRVLKTGLIPSADDEFPLTMDSIDQLENYVIEFGIRSRHQWIGENKWKYQRFRGFDSSA 464 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 + R L ++ DE + L + + W L L Sbjct: 465 QTDRERELQESMNRYRDQVISAIATVDE----QLRAATTVKDLCIAMYQWLEELKIPDQL 520 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 E D E + + E + + + LS+ + L Sbjct: 521 EVTRKYYDD------QGLPEKGREQEQVWDAVIQLFDEMVEIAGEEKMDLSVFQVALDAG 574 Query: 645 LDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 ++ + S + + + T+ R + LLG+N+G++P + G +++ Sbjct: 575 IETLQFSHVPPSMDHIIVGTIDRSRMSNIRCAFLLGVNEGIWPMKPTSDGMIDEAERLLL 634 Query: 704 ---------GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 + DD + A A+ +L ISY S ++ + PS L+ + + Sbjct: 635 EQNGLKLADTSERQLLDDWFYMYLAFTVAKDRLKISY-LLSDEEGKAKMPSQLIHRVEEL 693 Query: 755 IGQSHYLPGDEALNCDE-----------SEARVKAHLTCLHTRMPFDPQNYQPGERQSYA 803 + + + S + + A L P DP ++ + Sbjct: 694 FPATKNHILLQDPEDESNTRRFVSTELKSRSALTAQLAKFKKGYPIDPIWWEVYQWYVEH 753 Query: 804 -------REWLPAASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQ 854 L K S + P+ + + L+ ++ + F + L Sbjct: 754 HPQGGTTHRVLQGLHYENKPESLQKDTVEQLYPKRIQASVSRLETYYRCSYQHFAKYSLN 813 Query: 855 VNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE------------------- 895 + R L+ Q+ + L + E AE Sbjct: 814 LEERRTYK---------LDAPDIGQLFHEALKKITEWIHAEGNDFSALTKSQSSHYANRA 864 Query: 896 -----RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN-- 948 + + Y + E + L ++ +E+ Sbjct: 865 VTELSPVLQHQILHSSNRYAYIQKKLEEVIARATFVLGEQARLSHFSPVGLELGFGDGNN 924 Query: 949 -------------GVQITGWLPQVQP---DGLLRWRPSLLSVAQGMQLWLEHLVYCASGG 992 + + G + +V + L R + E A Sbjct: 925 QIPSLSMLLENGYELVLRGRIDRVDKAELENNLYLRIIDYKSSSKGLDLTEVYYGIALQM 984 Query: 993 NGESRLFLRKDGEW 1006 + L +W Sbjct: 985 LAYLDVVLTHSEKW 998 >UniRef50_UPI00019738F1 ATP-dependent nuclease subunit B n=2 Tax=Clostridium RepID=UPI00019738F1 Length = 1184 Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats. Identities = 134/1032 (12%), Positives = 280/1032 (27%), Gaps = 167/1032 (16%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK--FGIAANIDFPLPASFIWD 71 ++ + R+ L++P +V Q + ++ G+ NID + Sbjct: 15 THVLYENLIRQSLEEPEGKYFAIVPEQFTMQTQKDIVAMHPCHGVR-NIDIVSFERLAYR 73 Query: 72 MFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQ----- 126 +F + E P L + +LR + +LF Sbjct: 74 IFEELAVETPAV------------------LDDMGKSMVLRKVAAGRKKELRLFGSHLDK 115 Query: 127 ------LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 L S ++ F QY + + L + G L + + + L++ EYT Sbjct: 116 SGFIGELKSMMSEFF-QYGIT-GEALKEMAEGTQSAMLRQKLSDMSELYEGFREYTKD-- 171 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVF-ICGISALPPVYLQALQALGKHI-EIHL 238 R + ++ L + V + G + PV + L+ L + ++ + Sbjct: 172 -----RFIAKEEILDILCRVIPRSELIKDSVVTLDGYTGFTPVQYRLLELLLTYCRQVTV 226 Query: 239 LF-TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 NP R + L S G + Sbjct: 227 TITMNP----------------EENPYREKPIQHLFHLSSHTVCRLTDLAASSGAGRTED 270 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 LL + F + L I+ ++ R +E Sbjct: 271 ILL-------------------KGDCPRFRESPE---LSKIERELFRYGRRGEQKEGKQE 308 Query: 358 FSRSDNKRPLDPLDS------SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + ++ + H +P RE++ + ++ ++++ RDI V+ Sbjct: 309 EGKRKEEKQNQTGCGAPHRKSGLILHQAENPIREIQFVCAQIERLVKK-EGYRYRDIAVV 367 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 + YS + F +P + ++ +P++E + + F E V Sbjct: 368 TGALSDYSGELTRQFQE----NKIPCFLDSKKNILGNPMVELLRASMETLTEDFSYESVF 423 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 L + E L L +V GIR ++ W Sbjct: 424 RYLKTGMAVE----DVEKLSRLENYVKALGIRGYKRWNSR------------WERVYRDG 467 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 L E + Q V P+ + ++ + + L + + E L EW Sbjct: 468 ELLNLDELNEFREQIVAPFRPLREVFSDRSSSVREMTAALVHFLEEIHAEEKLGEWEKRF 527 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 +M +AE E + I + + V L ++ ++ Sbjct: 528 SEM------GEAELEKEYSQIYGLVMELFDRVAALLGDEVVSRREYAQILDAGFEEIKVG 581 Query: 652 QRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD------LMSQKPKRG 704 V L R K + +G+NDG+ P + G L+ +K Sbjct: 582 LIPAVVDRVVAGDLTRTRLSHIKALFFVGVNDGIVPSAVRRGGILTEAERRLLKEKGVEL 641 Query: 705 DRSRRDD---DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 + R++ +R + L++++ S PS L+ ++ + Sbjct: 642 APTAREEGFLERLYLYLVMTKPSDTLFLTWSQTSAA-GKGLRPSSLIGQVKSLFPELTET 700 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFD---PQNYQPGERQSYAREWLPAASQAGKAH- 817 DE S + L P+ + R + + +A Sbjct: 701 RSDEFEEAAWSLPAGRRALIGGLRERSASSSQPKFLELYRRFYTDSGYREMTRRLVEASF 760 Query: 818 -SEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIPDTE 868 S + + T + + ++R+ A F L++ R E D Sbjct: 761 CSYEDRGIGRTAAGRLYSPILRGSVTRMERYAACAYAHFLNFGLELRERREYELAAADIG 820 Query: 869 PFILEGLSRYQINQQLLNALVEQDDAERLFRRFRA--------------AGDLPYGAFGE 914 + + + E + G Sbjct: 821 NMFHSSIDLFFKTMKEEGRSFRTLSPEDRKELVGRCVSAVTAEYGNTVVSASSRNEYLGR 880 Query: 915 IFWETQCQEMQQLADRVIACRQPGQSMEIDLA--------------CNGVQITGWLPQVQ 960 + + L +++ E+ V + G + ++ Sbjct: 881 RVERITDRTVWALTEQLKKGDFEPAGFELTFTPADNLKAMKIPVSRTEAVHLQGRIDRMD 940 Query: 961 PDGLLRWRPSLL 972 + Sbjct: 941 LCEDEDKIYVKI 952 >UniRef50_B0TDI1 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=ADDB_HELMI Length = 1224 Score = 315 bits (807), Expect = 6e-84, Method: Composition-based stats. Identities = 140/1028 (13%), Positives = 266/1028 (25%), Gaps = 221/1028 (21%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMF 73 + ++ P + LV Q + L+ G Sbjct: 19 LDEIAQELKGSPQGPPL---LFLVPEQATFQT-ERALATMPG------------------ 56 Query: 74 VRVLPEIPKESAFNKQSMSWKLMTLLPQ-----LLEREDFTLLRHYLTDDSDKRKLF--- 125 L + F+ + ++++++ + + + +LR+ L D+ +LF Sbjct: 57 ---LGGTIRAQVFSFRRLAYRVLQEVGGSARIPIGDLGKRMILRNLLEKHKDELRLFHRS 113 Query: 126 ----QLSSKAADLFDQYLVY----------RPDWLAQWETGHLVEGLGEAQAWQAPLWKA 171 + A + +Y + + + + G L + A L+ A Sbjct: 114 AGQPGFADALAGALSELKLYNIDATSLDRCQTEVIERQGAGL----LADKLHDLALLYGA 169 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPS-RVFICGISALPPVYLQALQAL 230 L + ++ L L V++ G + P L L AL Sbjct: 170 LKTFLEGKYTDP-------DDYLHLLAQRIPGSVMLRDAEVWVDGFAGFTPQELSVLAAL 222 Query: 231 GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 + CR +E D Sbjct: 223 ----------MSACR------------------------RVNVALCLDPTELDEPCDLDD 248 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQ----ELDAFVDVTPDNLLHNIQSDILELE 346 R+ L L + E + P Q Sbjct: 249 PFFRT------------RETQAKLLQLAFDRGIVIEKALHLVPAPGQSAPRFQH------ 290 Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 ++E F P S+ + + EVE ++ + D R Sbjct: 291 ---PELQHLESFYFRRPAPPWLGGTQSLFVCAAANRRSEVEGAAREIIRL-CRDQGYRWR 346 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 D+ V++ D++SY I++VF +P I +R HP++E S L + Sbjct: 347 DVAVLLRDLESYYDSIESVFSDF----GIPLFIDSKRPAPHHPLVELIRSALEAVLRDWA 402 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 E V L ++ L +V GIR D L Sbjct: 403 YEPVFRYLKTDLVPLSRG----ETDRLENYVLAHGIRGRRWRDREPWLFRRRLTLGEDAL 458 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 + G S + + L L + Sbjct: 459 SEFSDQELAELAEINGARDRARAALASFHKAVVGAKAVRPITAALYQLLVDLKAPEQISC 518 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 W+ A E A + + + + + + L+ + LD Sbjct: 519 WIA------EAEAAGRIEEAHAHRQVWAAVIDLFDQIVESLGETPLDLATYAVVMEAGLD 572 Query: 647 QERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK--- 702 ++S V + +L R + +LG+++GV P + G ++ + Sbjct: 573 SLKLSLIPPELDQVFVGSLDRSRCPGIRAAFVLGVSEGVLPARPKDDGIFDDKERERIYA 632 Query: 703 -------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 G R R D+ Y AL A ++ Y+SY + + PS ++ + + Sbjct: 633 LTGLELAPGSRRRLFDEEYHIYVALTRASERCYLSYPLADA-EGRAQLPSSVIARVRELF 691 Query: 756 GQ-----------------------------------------------------SHYLP 762 Q L Sbjct: 692 PQVTERTWLLEPGSLPTGAGLSGSAFAGAATAETAAMAQTALAARTTKEAAMSAVERELA 751 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA--HSEF 820 + ++ S + + L R P + + W ++ H Sbjct: 752 EEYIVHPARSLSYLIPSLREALARRPVPLVWWAVYSWLAERPAWRELLARVLSGLWHKNR 811 Query: 821 VQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE 873 Q LP + + + ++RF A P F L++ R F L Sbjct: 812 EQDLPKPVSRRLFGDPLRASVSRIERFLACPFSHFISHGLRLKERR---------IFRLA 862 Query: 874 GLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA 933 + L E+ +RL G LP + E QL + ++ Sbjct: 863 APDLGEFFHAALKQFGERLRRDRL-----DWGALPREELFRLTGEVVSDLAPQLQNEILL 917 Query: 934 CRQPGQSM 941 + + Sbjct: 918 STARHRYL 925 >UniRef50_A7GAI7 ATP-dependent helicase/deoxyribonuclease subunit B n=15 Tax=Clostridium RepID=ADDB_CLOBL Length = 1150 Score = 315 bits (806), Expect = 8e-84, Method: Composition-based stats. Identities = 129/1039 (12%), Positives = 294/1039 (28%), Gaps = 182/1039 (17%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQW---LQMTLSQKFGIAANIDFPLPASFIW 70 ++ +D P ++LV Q L L +K G + Sbjct: 15 SQYCLNSIKNRIEEDIDRPLILLVPEQFSFQAEKNLIEVLDEKTG--FKTQVLSFKRMAY 72 Query: 71 DMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSK 130 +F V K + E LL + + D+ + K+F+ ++K Sbjct: 73 RVFNEVGGITAK------------------HMNESGKSMLLYNIIEDNKNNLKVFKKAAK 114 Query: 131 -------AADL---FDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 +D+ F +Y + P+ + + L A ++ H+ Sbjct: 115 RQGFITTISDIITEFKRYNIT-PEIILNNLENIEGDNLKYKMEDLALIFSQFETRLHKNY 173 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL---GKHIEIH 237 + +E L + ++I S+ P L+ L I I Sbjct: 174 IDNEDDLTI---LVEKLNKSKQFDNA---EIWIDEFSSFSPQEYSVLEKLLLKSYRINIT 227 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 L C Y ++ N Sbjct: 228 L-----CTDY-----------------------------LNQGRFVDTTDVFSPIKNTEN 253 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 LL ++ D + ++ D + ++E+ Sbjct: 254 KLL-----------QIIEDNNIKLDKPI-----------ALKCDPCARFKNSAELQHLEK 291 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 S + I + E+E ++ + D +DI V+ D++ Sbjct: 292 NMFSFPYKEYKNETKDICMLKTLNQFTEIENTAKDIIKLCI-DKGCRFKDIAVITGDLEG 350 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 Y I +VF +P+ I +R ++P++ +S L + + E V L Sbjct: 351 YENIISSVFLQY----NIPFFIDKKREINNNPIIVLILSALEVLSKNWTYESVFRYLKTG 406 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 +L DI E + L +V +GI+ G N + E + + + LL Sbjct: 407 LL----DINNEEMDILENYVLANGIK-GYQWTNDKPWEHKSFSNYELEDQALKELLAKIN 461 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + + ++ ++ + + L + + ++ + + Sbjct: 462 DIRYKAMEPIVTLNK----NFKSIDKAKEFCEVLYEFLCNINLPDKIQNMIEDFK----- 512 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA- 656 + E + I ++ + + + + L L + I Sbjct: 513 -VEGEIEKASEYNQIWNIVMEVLDQIVEVIGEEKISLKEFFKILQTGFSEYEIGLIPPTL 571 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR------- 709 V + ++ +RS + ++G+NDG++P L G + GD+ Sbjct: 572 DQVMVGSITRLRSHNINTLYIVGVNDGIFPSPLKEEGILSDDDREFLGDKGLEIAKDTKS 631 Query: 710 --DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG----------- 756 ++++L L + + L +SY + PS+++ + Sbjct: 632 IAFEEQFLVYSTLTTPSKYLRLSYPIADG-EGKTLRPSIIISRIKKIFANICEENDIVKL 690 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 + + + ++L + D + W+ ++ K Sbjct: 691 NGEEEELKNISSAKPTFNYLISNLRKDVEGVKIDNIWGDTYKWYLENEFWIEKLNRLIKG 750 Query: 817 HSEFVQP---------LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI-PD 866 Q + P + + +++F P F Q L+ R + PD Sbjct: 751 FDYTNQSKYIETKKIRNLYGKPLKISVSRVEKFSQCPFAYFVQYGLKAKDRKIFNLSYPD 810 Query: 867 TEPFILEGLSRYQ-------INQQLLNALVEQDDAERLFRRFRAAGDL-------PYGAF 912 F+ L ++ + ++ +++ ++L L Y Sbjct: 811 LGIFMHSILEKFSHELEKKGLEWDTMDLNWAEEEIDKLINEELDNKSLDILNSSKRYEYV 870 Query: 913 GEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG--------------VQITGWLPQ 958 + + + + + + + E+ +G + + G + + Sbjct: 871 TKSVKKILKRSIWLIGEHIKRGNFKPSYYELSFDIDGDYPPIAMELHSGEVINLIGRVDR 930 Query: 959 VQ---PDGLLRWRPSLLSV 974 V DG + Sbjct: 931 VDLLQKDGATYLKIIDYKS 949 >UniRef50_B0NKJ8 Putative uncharacterized protein n=8 Tax=Clostridiales RepID=B0NKJ8_EUBSP Length = 1141 Score = 315 bits (806), Expect = 9e-84, Method: Composition-based stats. Identities = 127/1002 (12%), Positives = 264/1002 (26%), Gaps = 144/1002 (14%) Query: 16 LMEFIVERERLDDPFEPEMILVQSTGMAQWLQ--MTLSQKFGIAANIDFPLPASFIWDMF 73 + + E + ++LV Q + + + GI NID + +F Sbjct: 17 HLYHQIIDESRIHQEQNYIVLVPEQFTMQTQKDLVNMHPCHGI-MNIDVLSFVRLSYRVF 75 Query: 74 VRVLPE-IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAA 132 +P K + K+ D+ L + K Sbjct: 76 EETGGGTLPVLDDEGKNLILRKI---------AGDYEGELKVLGGNMKKLGYVSEVKSVI 126 Query: 133 DLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQR 192 F QY + + ET L L++ +EY + + + Sbjct: 127 SEFAQYDITEEELERVMETAGEESRLYYKLKDIQVLYRGFMEYLEKKYITK-------EE 179 Query: 193 FIETLESATTCPPGLPSR-VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDI 251 ++ L L + V + G + PV + L L H Sbjct: 180 LLDVLSQMVCKSDMLKNSTVVLDGFTGFTPVQNRLLLELMIHC----------------- 222 Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYI 311 + D E+ + +G ++ + +L RD+ Sbjct: 223 -----------------RKVVITVTMDDREDPYVYQHPYQLFGLGKHMVTTLMRLARDHR 265 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 + + + D+L +E + + Sbjct: 266 IAVDEPVCLYGRPPYRFKDHDSL------------------AFLERNLFRYHGKGFGKEP 307 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 SI HV +P+ E + + A++ R+I V+V+++D Y ++ F Sbjct: 308 ESIGIHVTRNPKEEAMAVAGAIRALV-RKEGYRYREIGVIVSNMDVYGDDLEQAFAMY-- 364 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +P + +R+ + +E SLL + + F E V L + F + + Sbjct: 365 --EIPAFMDHKRSILLNSFVEYIRSLLDMAEQNFTYESVFRFLRTNLAGFNF----DEVD 418 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT-RMLLGYAMESAQGEWQSVLPY 550 L +V GI+ L + R++L V Sbjct: 419 RLENYVIGLGIKGYKRWQEKWVRRLKGMEEEELEALNHCRIIL-------------VEKV 465 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 D ++ + + + M L + + L + Sbjct: 466 DGLLYVLKQRSKTVRDITMALYEFMVREDLQVKLAALEERFQA------EGKLALAKEYA 519 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRS 669 + + + + + + V L+ L L++ R+ + V + R Sbjct: 520 QVYRIVIELFDKFVELLGDEKVSLNEYCKLLDAGLEEARVGVIPPSVDQVVAGDVQRTRL 579 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK---------RGDRSRRDDDRYLFLEAL 720 K + +G ND P L G + K G + + ++ L Sbjct: 580 KDIKALFFVGANDTYLPGSLLRTGLLSERDREKFARERLSLSPGGKEQAYIQKFYLYMNL 639 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 ++L I Y S D PS L+QEL + Sbjct: 640 TKPSEQLNIYYSKVSA-DGKSIRPSYLIQELRRLFPLLSVQDEEGRALALREITEKMGIG 698 Query: 781 TCLHTRM----PFDPQNYQPGERQSYAREWLPAASQAGKA--HSEFVQPLPFTLPETV-- 832 + D + + +W KA + + L + + + Sbjct: 699 YLIRGFQGNGEGMDAAWKELYTWYKKSPKWQSKVESLIKAGYYRRPMDGLTEAVAKRLYG 758 Query: 833 -----PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILEGLSRYQ------- 879 + ++RF F L + R E D L R+ Sbjct: 759 EEFEDSITRMERFQTCAFAHFLTYGLNLQERQEYDFQAVDMGNVCHNALERFSRKVEKEG 818 Query: 880 -----INQQLLNALVEQDDAERLFRR--FRAAGDLPYGAFGEIFWETQCQEMQQLADRVI 932 + ++ + +++ E + + + L ++ Sbjct: 819 CGWVGLKEEKRASFIDESVEEAITDYGNSVLYSSARNEYMIVRMKRMLERTVWALTKQLS 878 Query: 933 ACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSV 974 A + E A + + + + + Sbjct: 879 AGDFQPSAYEFRFANGKI---DRIDTCEDGDKVYVKVLDYKT 917 >UniRef50_UPI0001850BBB ATP-dependent nuclease, subunit B n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850BBB Length = 1158 Score = 310 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 126/1054 (11%), Positives = 286/1054 (27%), Gaps = 187/1054 (17%) Query: 14 EALMEFIVERERLDDPFEPEMI-LVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDM 72 A + ++ + ++P +I LV + + + Sbjct: 15 TATIIKEIKEKLKENPMGRPIIYLVPEQMT---------------------FLSEYAL-V 52 Query: 73 FVRVLPEIPKESAFNKQSMSWKLMTLL-----PQLLEREDFTLLRHYLTDDSDKRKLFQL 127 + I + ++ ++W+++ L L+R +TD D+ LF+ Sbjct: 53 QDEEIKGIIRAQVYSFTRLAWRVLQDTGGMNRYHLSSVGLNMLIRKIITDHKDEFTLFKK 112 Query: 128 SS-------KAADL---FDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTH 177 +S + D+ F +YLV P+ + L + +++ T Sbjct: 113 ASDKPGFVKQVEDMLIEFKRYLV-EPETIM---GETESRVLSDKLHDLEIIFREFELATK 168 Query: 178 QLGQPRWHRANLYQRFIETLESATTCPPGLPS-RVFICGISALPPVYLQALQALGKHIEI 236 + + ++ L S+ L ++I G + P +QAL + Sbjct: 169 EKYIDS-------EDYLTLLSSSIERSSYLKDADIYIDGFHSFTPQEYAVIQALMERT-- 219 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 +A + R + + + + Sbjct: 220 ----------------KRVTIAFTIDRSTQLPYGETKQ---------------------- 241 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 ++ + I + + S ++ + D I LE ++ Sbjct: 242 ------LFRMTEESISKIESIAYSSQIQQDPMIVLDTQARFKSQTIAHLERHWETRPSVP 295 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 S +T +P+ E+E + + + + RDI + + + Sbjct: 296 SNESSY-----------VTIVEAANPRAEIEGIAREIRRL-AREEGYRYRDIALFLRNSA 343 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y I+ +F +P+ + +R +HP++E S L S + E V + Sbjct: 344 DYGDIIETIFYDYD----IPFFMDQKRTMLNHPLIELVRSTLETIHSHWRYEAVFRAVKT 399 Query: 477 PVLAARFDIT---EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 +L E + L +V GI+ G N Sbjct: 400 DLLFPLDQSPKKLREKMDRLENYVLAYGIK-GSSWTNKDRWRYRRFRGLELTDSPQTDEE 458 Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD 593 + G + + + L + L + LE + D Sbjct: 459 REKEHEINELRLFISAPILRLGRRMKRGNTVRDYCISLYQFLEELDIPQKLERFAQSAND 518 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 D ++ + + + + D L ++ + S Sbjct: 519 ------RGDVIAAREHDQAWNAVVDLLDQYVEILGDSKISVKRFSDILDAGIETMKFSLV 572 Query: 654 FLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS----- 707 + V + L R + ++G+NDGV P + G + +R Sbjct: 573 PPSNDQVIVADLELSRLANIRAGFVIGVNDGVLPSKFQDEGILSAEDRTSFANRGVQLAP 632 Query: 708 ----RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 + +D+ ++ +A + ++LYISY + + S ++ + + + Sbjct: 633 TSTVKLEDEEFVAYKAFTTPSERLYISYALAND-EGKALMSSPYIKRINELLPNIRTQLV 691 Query: 764 DEALN-------------CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 + + S + V L P + + + Sbjct: 692 VQEPSELHVKFQKSYASHPTVSISYVTTQLQLGLRGYQVAPVWWDVYNYYMKSSHYQEKV 751 Query: 811 SQAGKA--HSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTED 861 + + + + L + + + ++ F + P F L++ R Sbjct: 752 HRILTSLFYQNRTKKLSEETSKELYGESILGSVSRMELFNSCPFSHFASHGLKLREREMY 811 Query: 862 S-EIPDTEPFILEGLSR-----------YQINQQLLNALVEQDDAERLFRRFRAAGDL-- 907 E PD L ++ + + Q E L R + L Sbjct: 812 RLEAPDIGELFHGALKWISDMMNDQNRSWKDLNKADCRKLAQHAVEVLAPRLQKQILLSS 871 Query: 908 -PYGAFGEIFWETQCQEMQQLADRVIACRQ-------------PGQSMEIDLACN-GVQI 952 + + L+++ L +++ Sbjct: 872 NRHHYIKRKLELILERASLVLSEQAKVSGFTPVGLELGFGPNGELPPFAFTLKNGIKMEL 931 Query: 953 TGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLE 983 G + +V D R +Q E Sbjct: 932 QGRIDRVDKGVKDEQTFLRIIDYKSSQKDLDLTE 965 >UniRef50_B8I2Y3 ATP-dependent helicase/deoxyribonuclease subunit B n=5 Tax=Clostridium RepID=ADDB_CLOCE Length = 1149 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 119/1004 (11%), Positives = 269/1004 (26%), Gaps = 181/1004 (18%) Query: 63 PLPASFIWDMFVRVL-----PEIPKESAFNKQSMSWKLMTLL-----PQLLEREDFTLLR 112 +P + ++ I K + + M+++++ + P + ++ Sbjct: 37 IVPEQYTLQAERDLIKVLGTGGILKTEVLSFRRMAYRVLNEVGGITYPHIHPSGKNMIIY 96 Query: 113 HYLTDDSDKRKLFQ-----------LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEA 161 L D+ +F LS+ +L +Y V R + + G + Sbjct: 97 RILERLKDQFTIFHKSANCKGFVNTLSTLITEL-KRYNV-RAESFDEVLQGLADDNY--- 151 Query: 162 QAWQAPLWKALVEYTHQLGQPRWHR-ANLYQRFIETLESATTCPPGL-------PSRVFI 213 L ++ + L R+ +T + T L S ++I Sbjct: 152 ----------LSHKLKEIKLIYSEFDSMLVDRYRDTDDELTLLSSKLEGTEIYAKSEIWI 201 Query: 214 CGISALPPVYLQALQALGKHIE-IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDR 272 G + P ++ + L + E +H+ DI A L + Sbjct: 202 DGFAGFTPQEVEVISKLIQQAENVHITM-------CTDILFDDVQADLTDVFAAVKKSCK 254 Query: 273 ELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPD 332 + +S L + P L + K R+ L Sbjct: 255 KFVSIAESYGVKILPPVC----LNTPNLPRF-KDSRELQSL------------------- 290 Query: 333 NLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR 392 E S + R I + E+E Sbjct: 291 -----------------------ETNYCSYSYRAYQLPTQDIELFESVNIYTEIEECARD 327 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 ++ D + +DI V ++ Y I +F +P I + +HP++ Sbjct: 328 IIKQ-CRDNGMQFKDITVATRNLTGYENLIGVIFEQY----NIPCFIDSKTEITNHPLVR 382 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 +S+L + + E V L + I + L +V GIR Sbjct: 383 MVLSMLEIFTENWSYESVFRYLKSGLT----GIDNTKIDILENYVLACGIRGSRWTQEAD 438 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 + +L ++ + ++ + + + Sbjct: 439 WNTSIEFRPDDGQKPENDEMLLNINKTRNEIREPLIRFRN----RTKGRRTAGDFCAGIY 494 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 + + E+ + ++ + + + + + Sbjct: 495 EYLVEIGVEQRIRNYIEKFTQ------SGQLRLAGEYQQVWNILMDVFDQAVEVMADETF 548 Query: 633 PLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 L + L + +IS + V + ++ +RS K + +LG NDGV+P Sbjct: 549 GLEKFANVFKIGLAEYKISSIPASLDQVLVGSIEHIRSHEIKALYILGTNDGVFPSAGMS 608 Query: 692 LGFDLMSQKPKRGDR---------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 G + + R +R D++YL L + + L +S+ + Sbjct: 609 EGVLSDADREVLDKRGIELASDTKTRAFDEQYLIYRTLTTPKNYLRLSWPIAD-HEGRTM 667 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA-----------HLTCLHTRMPFDP 791 PS ++ + + + D+ + A L + + Sbjct: 668 RPSTIISRMRKIFPKVTEKSNIVKPSADKQHIDLIASPIPAFNQLVCALRQKNEGIEQGE 727 Query: 792 QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE---------TVPLETLQRFWA 842 + S EW A P + + L+++ + Sbjct: 728 IWREIFAWFSGQDEWKQKCDAMINALKYRNIAAPVDKSKIRELYGKSPYFTVSRLEKYTS 787 Query: 843 HPVRAFFQMRLQVNFRTEDSE-IPDTEPFILEGLSRY-------QINQQLLNALVEQDDA 894 P + Q L R PD F+ + R+ + + + + Sbjct: 788 CPFAFYVQYGLGARERKIYRMSPPDVGTFMHAVIERFSKMVDENNYSWREFDRQWCSEQV 847 Query: 895 ERLFRRFRAA-------GDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC 947 ++ + G + A + + + + + E+D Sbjct: 848 SKIVDELLDSMKNTILGGSKRFKALAVRLKRVVTRAVWLITEHIRRSSFEPVGYEVDFGD 907 Query: 948 NG--------------VQITGWLPQ---VQPDGLLRWRPSLLSV 974 G +++ G + + ++ + R Sbjct: 908 GGAYPPMVIELDSGEKIRLVGRIDRIDALRAENGTYLRIVDYKS 951 >UniRef50_Q67MD4 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Symbiobacterium thermophilum RepID=ADDB_SYMTH Length = 1165 Score = 308 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 151/1008 (14%), Positives = 283/1008 (28%), Gaps = 165/1008 (16%) Query: 63 PLPASFIWDMFVRVLP-----EIPKESAFNKQSMSWKLMT-----LLPQLLEREDFTLLR 112 +P + + +L I + + Q ++W++ LP L + +LR Sbjct: 36 LVPEQATFQVEQALLGSGRLKGIIRAQVLSFQRLAWRVSLKAGGLALPPLSDLGKQMVLR 95 Query: 113 HYLTDDSDKRKLF-------QLSSKAADLFDQYLVYR--PDWLAQWETGHLVEGLGEAQA 163 L D +LF + A + YR P+ L + + EGLGE + Sbjct: 96 ALLEKKRDDLRLFHQVADKPGFIERVAGSIRELRSYRQGPESLRRQLSQLEAEGLGET-S 154 Query: 164 WQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGL-PSRVFICGISALPPV 222 A L L +L R ++ L + L + V++ G + P Sbjct: 155 LGAKL-HDLALVMDELRSYIEGRFTDPDEYLTVLAARLEESRLLEGAEVWVDGFNGFTPQ 213 Query: 223 YLQALQALGKH-IEIHL-LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 L L A+ + ++H+ L P + Y Sbjct: 214 ELAVLGAVMRSARQVHISLCIPPGQLY--------------------------------- 240 Query: 281 ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS 340 + D+ +P+L+ L L + + + + L Sbjct: 241 ----KAGGHHSPSDLFHPVLS--------TYDQLMQLAAESGVAVDPPLYLNEPLRF--- 285 Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 A ++E + + I + + EV +L ++ + Sbjct: 286 ------RGAPELAHVERYLFRQSAPAWPGAPERIALVEAQNRREEVAAAAREILRLV-RE 338 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 L R+I V+ D++ Y +F +P I RR HP++E + L + Sbjct: 339 EGLRFREIAVVARDLEGYGDLAATLFAE----HGIPAFIDRRRTVAHHPLVELLRAALEV 394 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR---WGIDDDNVRELELP 517 + V L + ++ + L +V E GIR W + Sbjct: 395 VVQDWAYGPVFRYLKTDLT----GVSRAEIDLLENYVIEHGIRGRAWQQQEPWQYLRRYT 450 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 + LL + +L + + + L Sbjct: 451 LEEDAVPAGPAQQALLDEIHRIRRRATAPLLAFQRRLQRRGRPGPTVREITTYLFQLLDD 510 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 L R LE W A D ET + + + + + + + Sbjct: 511 LKVARQLEAWKA------EAEQRGDLETAREHEQVWTRVLELFDQIVEGLGDQVLSPKVY 564 Query: 638 RDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 L+ LD ++ V + T+ R + +LG + +P Q A Sbjct: 565 LQVLSAGLDGLKLGLIPPGLDQVIVGTVERSRHAGVRATLILGATEKDFPPQPAEDAIFT 624 Query: 697 MSQKPK---------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 ++ + R +++L AL L+ISY PS + Sbjct: 625 DRERERLKQSGLDVGPTSLERLFQEQFLTYVALTRGSDFLWISYPLADE-SGRAAAPSPV 683 Query: 748 VQELIDYIGQ------------------------SHYLPGDEALNCDESEARVKAHLTCL 783 V + + AL S V+ H L Sbjct: 684 VGRMRRLFPELKPRPAAPPAPDAEAAVAQVATPRQLAAAVARALRRARSGYAVEPHWLDL 743 Query: 784 HTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAH 843 + + DP ++ G A + + G + L + + L+ F + Sbjct: 744 YQCIVLDPDLHREGAAVLAAVGYEEWLRRRGTPVGRELARLLYGDRLVTSVSRLEAFLSC 803 Query: 844 PVRAFFQMRLQVNFRTEDS-EIPDTEPFILEG-------LSRYQINQQLLNALVEQDDAE 895 P R F L++ R E + P+ F L R + L + Sbjct: 804 PFRHFAGYALRLQGRAEFTVSAPEFGLFYHAALSLFVRELERDGLAWDTLTPDEAWRRMD 863 Query: 896 RLFRRFRAA-------GDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG---------- 938 + R + + T + L++ V+ Sbjct: 864 SIIDRLAPRLQSEILLSSPQHRYLLRVIRRTLQSSLDYLSEHVLHGEFRPVAVEVPFGEE 923 Query: 939 ----QSMEIDLACNG-VQITGWLPQVQ----PDGLLRWRPSLLSVAQG 977 +E+DL G V + G + +V DG R + Sbjct: 924 MDGLPPVEVDLPGGGRVLLRGRIDRVDALEGRDGRWYVRVIDYKSGRR 971 >UniRef50_A7BX05 Exodeoxyribonuclease V gamma chain n=1 Tax=Beggiatoa sp. PS RepID=A7BX05_9GAMM Length = 458 Score = 306 bits (784), Expect = 3e-81, Method: Composition-based stats. Identities = 144/475 (30%), Positives = 240/475 (50%), Gaps = 38/475 (8%) Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISA 723 + PMRSIPFKV+CLLGMND YPR LGFDL+++ PK GDRSRR +DRYLFLE+L+SA Sbjct: 1 MRPMRSIPFKVLCLLGMNDQTYPRPSKSLGFDLITKHPKPGDRSRRQNDRYLFLESLLSA 60 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 + YISY+G SI DN+ PSVLV EL+DYIG++ P + ++ Sbjct: 61 RDYFYISYVGHSIHDNTVMPPSVLVSELLDYIGKAFISPH----------QNLLDNIIIH 110 Query: 784 HTRMPFDPQNY--QPGERQSYAREWLPA----ASQAGKAHSEFVQPLPFTLPE----TVP 833 H F P+ + S++ E+ A ++ A + LP PE T+ Sbjct: 111 HPLQAFSPRYFNETDKHLFSFSDEYCHASSVLLNERQLAKDFIAESLPPPQPEANWKTLD 170 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD 893 + RF+ +P RL + ++E + ++EPF + GL RY++NQ L+ +E D Sbjct: 171 INRFARFFKNPSEFLLTERLGIKLQSETHLLGESEPFEVRGLERYKLNQTLVEKSLEGVD 230 Query: 894 AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR---QPGQSMEIDLACNGV 950 + +A+G LP+G G+ + ++Q +RV + +++ ++L + + Sbjct: 231 LHEYHKIAKASGQLPHGGIGDYAYSKLVGQIQPFVERVQQATTRQKKRETVLVNLTIDDM 290 Query: 951 QITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN--GESRLFLRKDGEWRF 1008 +ITG+L ++ D L+ +R + L +QLW+ HLV + L + ++G W F Sbjct: 291 RITGYLGRLWHDNLVHYRCAKLKATDFIQLWIHHLVLNSLPEQKLPRHSLLIGEEGSWEF 350 Query: 1009 PPLAAEQALHYLSQLIEG-YREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKA 1067 P+ +++ L L++ Y +G+ PL P+S A+++ + T ++A Sbjct: 351 KPVN--ESIVILETLLKAYYWQGLMQPLSFFPQSSLAFVEQLTTGK---------TEEEA 399 Query: 1068 RTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETME-AIVEQSQRFLLPLFRFNQ 1121 ++ + GN GE D+ +YQ + + T +++F P+ Q Sbjct: 400 FSRAQNTWRGNDFANGEFDNDYYQLCFGKETSPLDNGEFKILAKQFFEPMLAHLQ 454 >UniRef50_Q0SWW7 ATP-dependent helicase/deoxyribonuclease subunit B n=9 Tax=Clostridium perfringens RepID=ADDB_CLOPS Length = 1158 Score = 306 bits (783), Expect = 4e-81, Method: Composition-based stats. Identities = 125/1036 (12%), Positives = 299/1036 (28%), Gaps = 165/1036 (15%) Query: 17 MEFIVERERLDDPFEPEMILVQSTGMAQW---LQMTLSQKFGIAANIDFPLPASFIWDMF 73 ++++ + P ++LV Q + + +++ N + ++F Sbjct: 18 CINQIKKKINNSPTNKLILLVPEQFTFQTENKVLNAIGERY--VLNAEVLSFKRLAHNVF 75 Query: 74 VRVLPEIP-KESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF-QLSSKA 131 K + +K++ L + + ++ ++K F ++SK Sbjct: 76 NECGGATRTIMGDAGKSMLIFKVLEDLGDNMT----------VFKNASRQKGFIDIASKT 125 Query: 132 ADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQ 191 F +Y V + L E L ++ H+ + L Sbjct: 126 ITEFKKYNVNN-EVLDLTINEIEDENLKMKMEELKDVFNEFNSRLHEGYVDEEDQLLLLN 184 Query: 192 RFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDI 251 ++ ++I S+ P L +GK ++ Sbjct: 185 EKLDGCSLYDGAE------IWIDEFSSFTPNQ---LSVIGKLLK---------------- 219 Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYI 311 E SD N + + Sbjct: 220 -----------------KAKSVNITLSIDEVNSPKVESDLFVATKN--------TEKRLM 254 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 L+ + E AF N+ DI +IE + + + Sbjct: 255 NLIQE-----EGIAFNGY------INLNEDIPYRFKENKELAHIERQLYAYPFKQYRGEN 303 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 +S+ + ++ E+E + +L ++ + +DI V+ ++D+Y I A+F Sbjct: 304 NSLRLYRANNNYDEIEFVAKDILRLV-REKQYRFKDISVICREVDNYEKVISAIFAEY-- 360 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI-TEEGL 490 +PY I + S+P++ S + + + E + L ++ I E + Sbjct: 361 --EIPYYIDKKIDIASNPLIVFINSAVDIISKNWTYESMFKYLKTGLIKEFRGIEGAELI 418 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 L +V GI+ + + + L E ++++ Sbjct: 419 DELENYVLAYGIKGKKWMEEWVNYSSSILKEEEISEENKQRL-----ERLNDIRETIVTP 473 Query: 551 DESSGLIAELVGHLASLLMQLNIWRR-GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + + L + L + L +++++ ++ A Sbjct: 474 LDEFNKECKGKKTLKEFAIILYEFLDSKLNIMDTIDKYVEYFKE------NDMAIEAKEY 527 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMR 668 + + + ++ + + + + L L L Q + +A VNI + ++ Sbjct: 528 SEVRDIFIDVLEQAVDVLGNEVMDLDEFMKVLNIGLSQYEMGLIPVALDQVNIGDITRIK 587 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR---------GDRSRRDDDRYLFLEA 719 S K + ++G+NDGV P G + + R++ ++++L A Sbjct: 588 SRGTKALYIIGVNDGVLPSASKEEGILSDNDREILLEKGISLASDTRTKIFEEQFLVYTA 647 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG---------DEALNCD 770 A++ L ++Y + + PS++V L + D+ Sbjct: 648 FTIAEEYLVVTYPLADF-EGKSQRPSIIVHRLKKILPNVKEESEGFKLVNDKYDKISAKI 706 Query: 771 ESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK--AHSEFVQPLPFTL 828 + + + + D + +W K ++ + Sbjct: 707 PTLNELMIAIRKNYDGAEIDDYWKYVYDWYLREPKWKERIEYVRKGLEYTNLENNISKEK 766 Query: 829 PET----------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE-IPDTEPFILEGLSR 877 + + + L+R+ P + Q L+ R PD F+ E L Sbjct: 767 AKKLYEDNKNKISLSVSRLERYAQCPFAYYIQYGLKAKDRKIYEFTAPDLGSFMHEILDE 826 Query: 878 YQINQQLLNALVEQDDAERL----------------FRRFRAAGDLPYGAFGEIFWETQC 921 + ++ ++ D + + Y F + F Sbjct: 827 FT--NEIKEKDLKWSDLSKENCKNIINSLVDNQVKNNKSSILNSSKRYSYFTDRFKRILT 884 Query: 922 QEMQQLADRVIACRQP-------------GQSMEIDLACNG-VQITGWLPQVQP---DGL 964 + + +++++ S+++DL + G + ++ DG Sbjct: 885 KSVMVISEQMKRSDFEIYKNELAFGFSKDVNSIKLDLPSGESFYLNGRIDRIDKLNLDGE 944 Query: 965 LRWRPSLLSVAQGMQL 980 R Sbjct: 945 TYLRIIDYKTGSKKFD 960 >UniRef50_Q18AP0 ATP-dependent helicase/deoxyribonuclease subunit B n=9 Tax=Clostridium RepID=ADDB_CLOD6 Length = 1155 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 94/735 (12%), Positives = 224/735 (30%), Gaps = 94/735 (12%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 + ++E F + + +I ++ EVE + ++ ++ D + R Sbjct: 283 EKVKELQHLERFYNAYPYKIYSNPTENIKIKEFNNLYSEVEEIAREIVHLV-RDKNVRYR 341 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 DI + D++ Y + ++F +P I +R +S+P++ IS L + + R+ Sbjct: 342 DITIATRDLNRYDFLVHSIFNEY----NIPNFIDKKREAKSNPIVILIISALEMKNRRYG 397 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 E + L ++ I + + L +V +GI+ G + + Sbjct: 398 YETMFRYLKSGLI----GIDNDDINLLENYVLANGIK-GKKWFDEKWDYRITQSLSGQES 452 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 L E + ++ E + + + + + +E Sbjct: 453 EFELELKEKINEIKNRVLEPIVILQE----KLRGKNRVKEICRYIYEFLLDINMPETIES 508 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 + +D + + + + I+ + + + + L + D Sbjct: 509 LIVNFKD------KGELDVANQYSQVWDIVVDILDQMVELMGDEIISLEKFIKLITLGFD 562 Query: 647 QERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 + + + V + ++ M++ K + L+G DGV+P G + + G+ Sbjct: 563 EYELGLVPPSIDQVLVSSVDRMKNPDTKYLYLVGTTDGVFPLITKDSGILSDNDRESLGN 622 Query: 706 R---------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 + +R ++++L +AL S + L I+Y S + PS+++ L Sbjct: 623 KGIEVDIDSKTRSFEEQFLVYKALTSTSKNLTITYP-ISDHEGKTLRPSIIISRLKKIFP 681 Query: 757 QSH---YLPGDEALNCDESEARVKAHLTCLHTRMPFD---------------------PQ 792 YL + + ++ + + Sbjct: 682 NIENKSYLVEENKNTDKDILKKITVKSPTFNELINVIKNYDSDGYNTEEINSIWLDIYRY 741 Query: 793 NYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE-TVPLETLQRFWAHPVRAFFQM 851 + S ++ + S + H + + ++ + L+++ P F Q Sbjct: 742 YLKDEIYSSITKKVIKGLSYTNQVHKIEEKKIRSLYKSNSLSISRLEKYAECPFAYFIQY 801 Query: 852 RLQVNFRTEDSE-IPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFR-------- 902 L+ R E S PD FI L R+ ++LL + D + + + Sbjct: 802 GLKAKKRKEYSFTPPDLGTFIHNILDRFS--KELLQDNLTWRDIDEKYIELKIGIIVDEI 859 Query: 903 --------AAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG----- 949 Y + ++ ++ E+ NG Sbjct: 860 ILKIPGYILNSSERYKYLAYRLKNMLTTAITIISQQIKQGSFEPIDYEVKFGDNGKYPPI 919 Query: 950 ---------VQITG---WLPQVQPDGLLRWRPSLLSV--AQGMQLWLEHLVYCASGGNGE 995 V + G + + + R + + + + Sbjct: 920 KMVLENGQEVSLIGQIDRVDEFEEGENKYIRIIDYKSGNKSISLTEIYYGLQLQLLVYLD 979 Query: 996 SRLFLRKDGEWRFPP 1010 + L KD + P Sbjct: 980 AILESAKDEDMNINP 994 >UniRef50_A9KTE7 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Clostridium phytofermentans ISDg RepID=ADDB_CLOPH Length = 1147 Score = 302 bits (772), Expect = 7e-80, Method: Composition-based stats. Identities = 137/1055 (12%), Positives = 282/1055 (26%), Gaps = 155/1055 (14%) Query: 16 LMEFIVERERLDDPFEPEMILVQSTGMAQWLQ--MTLSQKFGIAANIDFPLPASFIWDMF 73 + V L +P +ILV Q + +T+ K GI NID + +F Sbjct: 17 QLYQRVIESSLKEPKGKFLILVPEQFTLQTQKDLVTMHPKKGIH-NIDILSFLRLAFRIF 75 Query: 74 VRVLPEIP-KESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAA 132 K + K+M R+ L K + Sbjct: 76 EETGGNDRLVLEDTGKSMIVKKVM------------MEKRNDLILFGANVKKQGFVEEMK 123 Query: 133 DLFD---QYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANL 189 + QY ++ + E L +++A E+ +L Sbjct: 124 SIISELAQYSIHTDELQKMKEVAKGKPLLNHKLTDIMTIYQAYEEFLQDKYINSEEILDL 183 Query: 190 YQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL---GKHIEIHLLFTNPCRY 246 I+ + + G + P + L L K + + + Sbjct: 184 LCDVIDDSSFVNDSE------ICLDGFTGFTPSQYKLLSHLMKKAKSVTVTITM------ 231 Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKL 306 D + + + + + L GK+ Sbjct: 232 ------DESQINR---------------------------------KQEEHQLFYLSGKM 252 Query: 307 GRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRP 366 L+DL +Q+++ P L+ + + ++A +E+ + Sbjct: 253 A----EKLTDLAITQKIEI----KPPILVASENGGYSYRFHNSMALSALEKNIFRYPYKS 304 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 I+ P E + +L E+ +DI ++ ++ Y ++ Sbjct: 305 FTEEQDDISITAAKDPMAEARHAVIEITRLLREEE-YRYKDIAIVSGAMEVYGDIVKREL 363 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 A +P + ++ ++PV+E S L + F E + L + D T Sbjct: 364 ELA----GIPCFVDHKKNILTNPVVEFLRSALDVVTHNFDYEAIFRFLKCGLT----DFT 415 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + + +V GIR ++ E + + + L + + Sbjct: 416 MDEIDLFENYVIAFGIRGKYRYEHEWERKYKTNYE---------VDLEKINYVRECILKE 466 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 P E + + + L E + ++ + D Sbjct: 467 FTPLYE---TLTSKKSSVRECVNALYNLLCTYHIEEKIHIFVEKFKAQGE---KEDKLRA 520 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLM 665 I + I + D +PL RD L + ++ + + + + Sbjct: 521 KEYEQIYRMVLEIFDRMVELLGEDVLPLKEFRDILDTGFREAKVGLIPPSIDQILVGDIE 580 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR-----------RDDDRY 714 R K + LG+NDG+ P+ G +++ D + + Sbjct: 581 RTRLKDIKALFFLGVNDGIVPKANPGGGILSDAERQLFADHEIELSPTKRQTAYLTE--F 638 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP------GDEALN 768 L Q KLY+ Y S L+ ++ + DE L Sbjct: 639 YLYLNLTKPQNKLYLYYSKLD-VSGKSIRASYLLGKISKIFPKLKIYDADRKSREDELLG 697 Query: 769 CDESEARVKAHLTCLHTRMP-FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT 827 D+ + + + L P + Y G + + Q L Sbjct: 698 TDQGLSYLISVLRDYEGEQPKLWREVYHLYVSGQIKGRISLDKVLQGVFYQNYEQGLTKE 757 Query: 828 LPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIPDTEPFILEGLSRYQ 879 + + + ++++ A F Q L + R E +PD E L R+ Sbjct: 758 VARKLYGETLLGSVTRMEKYAACAFAHFLQYGLSLEERQEYKISMPDIGSLFHEALERFS 817 Query: 880 INQQLLNALVEQDDAE---RLFRRFRA-----------AGDLPYGAFGEIFWETQCQEMQ 925 + L+ + + L R + + Sbjct: 818 KALKELDISWHELPEDVRISLGERCVREAVENFGNGILESSKRSAYLATRVERILQRTTK 877 Query: 926 QLADRVIACRQPGQSMEIDLACNG--VQITGWLPQVQ---PDGLLRWRPSLLSVAQGMQL 980 L ++ S E + + + G + +V DG L + Sbjct: 878 TLTHQLQQGVFEPGSYEQYFSHADRYLNLRGRIDRVDLYEQDGKLYVKVIDYKSGSTSFD 937 Query: 981 WLEHLV-YCASGGNGESRLFLRKDGEWRFPPLAAE 1014 + G S ++ + Sbjct: 938 LMNLYYGLQLQLGVYLSAAMELMKEQYPNHEIHPA 972 >UniRef50_Q24WW7 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Desulfitobacterium hafniense RepID=ADDB_DESHY Length = 1220 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 156/1058 (14%), Positives = 291/1058 (27%), Gaps = 164/1058 (15%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF---GIAANIDFPLPASFIW 70 + + P ++LV Q ++M+L+ GI W Sbjct: 19 RQEIHKESQEHPEGLPL---ILLVPEQATHQ-MEMSLAHDPQSGGIL-RAQVLSFRRLGW 73 Query: 71 DMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSK 130 +F V + + ++L R R L + ++ Sbjct: 74 RVFSEVGGGGKAV-----------IGEVGKRMLLRRLLLNHRSDLRVFARSATRPGMADL 122 Query: 131 AADLFDQYLVYR--PDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRAN 188 A ++ +YR PD L E + L + A L++ L + + N Sbjct: 123 LAQAIAEFKIYRITPDQLRGIEDADEL--LLQKTHELAFLYEELNKSLGTAARDPDDELN 180 Query: 189 LYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA-LGKHIEIHLLFTNPCRYY 247 L + P +++++ G P L +QA LG EI + Sbjct: 181 LVA------GKISQAPFLQGAKIWVDGFKGFTPQELYVIQAMLGTAAEITVSLP------ 228 Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG 307 DP L R + E + + + + L + Sbjct: 229 ----LDPELLKAGTPRFKPGEELFYEPRQTYQGLVDLAR---EAKASISHVFLTETHRFE 281 Query: 308 RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 + + L ++ F Sbjct: 282 KAGLKHLERFYNAYPTQTFPGGDDST---------------------------------- 307 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 P I + + EVE + L + + T RD V+ D+ Y I+ VF Sbjct: 308 APDPLGIALFPAANKRAEVEGVARELRRL-AREEGRTWRDCSVVTRDLPGYQGIIEQVFN 366 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 +PY + +R HP+LE +S + + E + L F ++ Sbjct: 367 ----AHEIPYFLDHKRPVIHHPLLELLLSAIETVQKDWAYEPLFRCLKTDF----FPCSK 418 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + + L + GI N P GL + Q++ Sbjct: 419 DRIDRLENYCLAYGIHGSAWKGNRSWSYYPDPNHKEETAGLNE-TRQIIYDLFSPFDQAI 477 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 P+ E+ G +A + + L L+EW D Sbjct: 478 RPHPEAGGPSV----TVAQITEAIYELLIRLKVPEHLQEWAEAAHS------RGDLAEAQ 527 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMP 666 I ++ E + + + LS L L+ ++ V + +L Sbjct: 528 LQNQIWDAVIQVLDELVAGLGEEVMDLSDFAMILTSGLENLQLGLIPPGYDQVLVGSLDR 587 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS---------RRDDDRYLFL 717 R+ V+ LLG NDG+ P + + G ++ + + + +++Y Sbjct: 588 SRNPETAVLFLLGANDGILPGKPSDEGVFDELERLRLESKGIMLAPKGKVQVYEEQYFIY 647 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ------SHYLPGDEALNCDE 771 AL A+++LYISY + S ++ L S AL Sbjct: 648 TALTRAREQLYISYPLTDE-EGRGLTVSPVIHRLKMIFPGLPEKYLSLDEEEPGALPHPY 706 Query: 772 SEARVKA-HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP--LPFTL 828 + A HL L P P K + + LP L Sbjct: 707 ALLPAYALHLQKLRQGSSLSPLWQAIRLWFLSQTAAFPQVQLLEKGLRDQNEEGKLPQPL 766 Query: 829 PETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSE-IPDTEPFILEGLSRY-- 878 + + L+ F P F Q L++ R+ PD F L Y Sbjct: 767 ARQLYGKRLVTSVSRLELFARCPFAHFAQYGLKLKERSNYRLSPPDMGQFFHAVLHDYAI 826 Query: 879 QINQQLLNA------------LVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 + ++ L+ + + + Y T ++ Sbjct: 827 ALRERGLDWGELSKEQSWQLVNETAEPIALQLQNKILLSNARYRYLTHKLKRTVHHAVRV 886 Query: 927 LADRVIAC-------------RQPGQSMEIDLACNG-VQITGWLPQVQP---DGLLRWRP 969 L + ++ +E+ L+ + + G + ++ + R Sbjct: 887 LGEHARQGVFLPMELEVKFGPQEALPPLEVPLSGGNSLLLRGQIDRIDGAVLGHEIYLRI 946 Query: 970 SLLSVAQGMQLW--------LEHLVYCASGGNGESRLF 999 + L+ L Y + G L Sbjct: 947 FDYKSREAHVSLNQIYHGLDLQLLAYLDAALQGAQILV 984 >UniRef50_C4Z990 AddB n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z990_EUBR3 Length = 1156 Score = 301 bits (770), Expect = 1e-79, Method: Composition-based stats. Identities = 131/1055 (12%), Positives = 286/1055 (27%), Gaps = 176/1055 (16%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQM--TLSQKFGIAAN 59 L+ N + + + +E +P + +++V Q + LS+ I N Sbjct: 3 LQFITGNSGNGKTKYLFNRIVKEAKANPRDNYLVIVPEQFTMQTQRQLVDLSENKAI-MN 61 Query: 60 IDFPLPASFIWDMFVRV-LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 ID + +F + + + K + KL E + ++ L Sbjct: 62 IDVLSFKRLAYRVFDELGITNLTVLEETGKNLVLRKLAA-----QEADKLGVIGRNLNRI 116 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQ 178 ++ L S+ QY + + +G L + L + L++A ++ Sbjct: 117 GYISEVKSLLSELV----QYNISPEELGRYIASGMLSDTLSDKLKDVLVLYEAFEKFMQD 172 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICG-ISALPPVYLQALQAL---GKHI 234 + + L + L + V + P+ Q ++ L K I Sbjct: 173 KYITA-------EEILNVLSNVAEESAILRNSVIAFDEFTGFTPIQNQLIKKLFVISKKI 225 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 + L CR DI + +L +R Sbjct: 226 YVTLTID--CRE---DIFKSRGMQELFDMPKR---------------------------- 252 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 + L+++ + ++ + IL+ R Sbjct: 253 ---------------TVKSLTEMAAFYGIEVEEPI------------ILDKNYRLAENEE 285 Query: 355 I---EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + E+ + I P++E+ + R+ ++ + L RDI ++ Sbjct: 286 LSFMEQQLFRKRRSSFKKAPKHIHIDCLRDPKQELTKIARRINELV-RNENLRYRDIAIV 344 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 D++ Y+ +++ +F +PY I + HP +E S+ + F ++ V Sbjct: 345 TGDVNIYAGYVREIF----DKYNIPYFIDATQEILFHPFIEFIRSIPDIAAQNFSADAVF 400 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 L +++ + L +V G+R G + + + LP G Sbjct: 401 RFLRCGFT----ELSASEIDVLENYVLACGVR-GKSAWDKKWVRLPKHK-----AGYDIE 450 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 LL + E + V + ++ + L L + Sbjct: 451 LLNQSREYIMELLKPVYQVFSDKKS------TVKDYVLAIYKLIVLLDIPDKLAKKEQAL 504 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 D I + + + + + + L LD ++ Sbjct: 505 ------LDAGDQTASKEYGQIYKIVMQLFEKYVAVLGDECMDAEEFTQILDAGLDAADVA 558 Query: 652 QRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK-------- 702 V I + R KV+ G+NDG+ P+ G ++ Sbjct: 559 VIPPGYDTVTIGDIERTRLTNIKVMFFAGVNDGIVPKAAGRGGIISQYEREALKELDIEL 618 Query: 703 -RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 G R + R+ + ++LYISY + PS L+ L + Sbjct: 619 APGAREQAFIQRFYLYLNMTKPSRELYISYTRLD-SEKKAAQPSYLIGILKGMFPELVVT 677 Query: 762 PGDEALNCDE--SEARVKAHLTCLH-----------------------TRMPFDPQNYQP 796 ++ + S +L D + + Sbjct: 678 ETEDVEQLLDISSRQSALDYLLSNEVDDRWCEIAAAVMFYDASVSDAGDGNEVDDKAFTQ 737 Query: 797 GERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN 856 + + + + ++F F L++ Sbjct: 738 KNSVERLINARFEHYSKDPISRNVARSI-YGRHMEGSITRFEQFARCAYAHFLNYGLRLT 796 Query: 857 FRTEDSEIP-DTEPFILEGLSRYQ--INQQLLNAL---------VEQDDAERLFRRFRAA 904 R E D E L RY ++++ + + + + + Sbjct: 797 EREESGFTSLDMGNIYHEALERYSKKLDRESTDWFSVTDAKRDELAMEAINEVIDEYAGF 856 Query: 905 GDLPYGAFGEIFWET---QCQEMQQLADRVIACRQPGQSMEIDL--ACN-----GVQITG 954 G Q + L ++ + E + + V I G Sbjct: 857 GIFDTAESQHSISHMKAVFKQTVWALTTQIRRGSFVPERFEFSFYESLDMANDVTVDIKG 916 Query: 955 WLPQVQPD---GLLRWRPSLLSVAQGMQLWLEHLV 986 + + L + + ++ Sbjct: 917 RVDRTDTYTDEDRLFVKVLDYKSGNTVFDLVKLYY 951 >UniRef50_B9XFA2 ATP-dependentnuclease subunitB n=1 Tax=bacterium Ellin514 RepID=B9XFA2_9BACT Length = 1129 Score = 300 bits (767), Expect = 3e-79, Method: Composition-based stats. Identities = 161/1038 (15%), Positives = 299/1038 (28%), Gaps = 142/1038 (13%) Query: 65 PASFIWDMFVRVLPEIP-----KESAFNKQSMSWKLMTLL----PQLLERED-FTLLRHY 114 P + + ++L + + + +++ + L PQ+L+ E +LR Sbjct: 40 PKQTTYQLERQLLAYPSVAGYTRLQILSFERLAFFVFNSLQKPPPQMLDEEGRLMVLRSL 99 Query: 115 LTDDSDKRKLFQLSSKAADLFDQYL--VYR--------PDWLAQW-ETGHLVEGLGEAQA 163 L D+ KLF+ S++ A F Q+L V R P+ L + E H VEGL Sbjct: 100 LARKRDELKLFRASARLAG-FAQHLSRVLRELQHHQLTPESLHELAEQVHAVEGLSYKLH 158 Query: 164 WQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVY 223 L L +Y L + F + P +++ G + L P Sbjct: 159 D---LGTMLRDYLDWLQAHHLQDGDNLLTFATEVLREPHAPLNFGE-MWVDGFTDLSPQE 214 Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 L L + H + D ++ L DR F N Sbjct: 215 LDLLAQIIPH------VPQATLTFCLDQVPTERISWLSNWSVPRRTYDRCQKRFAGLPNV 268 Query: 284 GQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL 343 LLA R ++ ++ LH+++ Sbjct: 269 ELSKE----------LLARHMNRSR-FLN-------------------NSPLHHLEQHWA 298 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 E + A +S S+ C +P+ E + +L + Sbjct: 299 EPKPFVDAATAARPYSLR----------ESLRVITCTNPEAEATLAAREVLRFVRS--GG 346 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 R++ ++V +D+Y + F +PY + R A HP+ E + L Sbjct: 347 RFREVTILVRKLDNYHEALANTFKRYD----IPYFLDRREAVSHHPLAELTRNALRTVAF 402 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 + +D A L ++ A + + L G W L Sbjct: 403 SWSRDDWFAALKTGLVPA----EDTEIDRLENEALARG--WKGSTWQHPILIHDNPELTE 456 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 W L R ++ ++++ L L + + L + Sbjct: 457 WAENLRRKIV--------PPFKNLAVNMGQQSNRPSG----RHLAAALRDFWQSLKVDET 504 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 L+EW ++ P + +Q A + A + +PL L Sbjct: 505 LQEWSDAEIAGSDSQLAP-----PIHLTVWEQMNAWLENVELAFPTETLPLREWLPILEA 559 Query: 644 RLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 L + A V I + R+ ++ +LGMN+GV+P + + + Sbjct: 560 GLANLNVGVIPPALDQVLIGAIDRSRNPDIRLALVLGMNEGVFPAPPEQSVLLTDADREE 619 Query: 703 R---------GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 R + +RY A A+Q++ ++ PS + +L Sbjct: 620 LKKKDVELGASTRQQIGHERYYGYVACTRARQRVVLTSAIFDAA-GKPLNPSPFLSQLKQ 678 Query: 754 YIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQA 813 ++L+ +S + L P + G L A + Sbjct: 679 LFPSLETETFPKSLDWRKS-EHANELIVPLLRNQVQSPISKVQGVSALNKFPALAALRER 737 Query: 814 GK--AHSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 K + + + L L E + + +++F A P + F L+ R + Sbjct: 738 LKHFSTTPTEESLSPELAERLYGPALRTSVSRMEQFAACPFKFFVHSGLRAEERKK---- 793 Query: 865 PDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEM 924 F L+ + ++L + EQ E R + I Sbjct: 794 -----FELDIRDQGNFQHEVLASFHEQLKTEN-KRWRDISPQEARERIKSIALTMMVSYR 847 Query: 925 QQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 L R + + L + GW+ Q + Sbjct: 848 DGLLQVSEETRFTARVLTESLQDFVETLVGWMGQQYAF--------DPKAVELPFGEDLF 899 Query: 985 LVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGA 1044 + G L + +E A L +++ Y+ +L E G Sbjct: 900 PAWELELGKDHKLLLHGRIDRIDICR-ESEDAEEALCVVVD-YKSSQKQLDPLLMEHGLQ 957 Query: 1045 WLKTCYDAQNDAMLDDDS 1062 Y D Sbjct: 958 LQLAAYLNVLRHWPDPRP 975 >UniRef50_C6IZE2 ATP-dependent nuclease subunit B n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZE2_9BACL Length = 1180 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 141/1053 (13%), Positives = 289/1053 (27%), Gaps = 168/1053 (15%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID--FPL 64 S + ++ + + + + P +IL G Q ++ ++ G+ + Sbjct: 12 SGKTSLILDRVTAKLREQPIGPPL---IILTPEQGTFQ-IEQRIATAPGLRGTVRTQVLG 67 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 + L + + LL + + KL Sbjct: 68 FRRLALRVMQETGG------------------AALVPIDDEGKKMLLYKLMRRRKGELKL 109 Query: 125 FQ-------LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTH 177 F L + A L+ + Y D+ A E L+E L + + + Sbjct: 110 FGHGGDQLGLIDRIAGLYTEMKKYNVDFSALREHYQLLEQTEGES---PLLKDKMHDLSL 166 Query: 178 QLGQPRWHRANLY---QRFIETLESATTCPPGL-PSRVFICGISALPPVYLQALQALGKH 233 + + LY + + L + L + ++I G P A+ AL K Sbjct: 167 LFAEYDEELSRLYIDNEDHVVKLAQGASKSAYLRGAEIWIDGFHTFTPQEYTAILALLK- 225 Query: 234 IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ 293 Sbjct: 226 -----------------------------------TAASVTVSLTLDRVYSNGNLPHELN 250 Query: 294 DVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 P A LS L + + ++ + L E E + Sbjct: 251 LFYTPASA---------FVKLSRLAAEEGIEVL---PAELLEARPFPRFRESETLSYLES 298 Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA 413 E S P L+ +++ H S + EVE ++ + + + RD+ ++V Sbjct: 299 AYERRSPWPKSEPPQDLEQALSLHRAASRRAEVEGAAREMVRL-AREEGVRWRDMALLVR 357 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 ++ Y + + +PY + + + HP++E + L + + EDV Sbjct: 358 NLGDYEELLAPTMEAY----GIPYFLDQKASMLYHPMIEFIRAALDVVLGFWRYEDVFRC 413 Query: 474 LDVPVLAARFD-ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 + L +T E + L + SGI+ D P+ + Sbjct: 414 VKSEFLLPLDGSLTREHMDVLENYALASGIQGYRWFDGRPWKSAPSLSLEQEDQTAASVK 473 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 ++ + +V + + A + + + + L+ Sbjct: 474 AMEQLQLLERCRAAVAGPLSAFEKEIRKAKNAADMCAAVFHLLERVEAAQRLDVLAHRMV 533 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 + ++ + + + + L L L L + ++S Sbjct: 534 R------EGKPRQAMEHRQLWSAVLDVLDQIVEMMGDEPLELELFAGVLETGLKELKVSL 587 Query: 653 RFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK--------- 702 + V I + RS K + LLG+N+G+ P L G ++ + Sbjct: 588 VPPSLDQVLIGSTERTRSGQVKHLFLLGINEGIMPANLQEEGVLSEQERERLAELGLELA 647 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 G + D+R+L EAL A + L++SY + PS +++ + P Sbjct: 648 PGLARKLLDERFLIYEALSGASRSLWLSYPAADG-EGGALLPSEVIRHVKRIFPGLTERP 706 Query: 763 GDEAL------------------NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 + + L P ++ E Sbjct: 707 LLLTPGPASRSADPMASQLEFVSRPGPALNALIGQLRLWKAGESISPLWWRVLEWYKTRP 766 Query: 805 EWLPAASQAGKA--HSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQV 855 EW A++ + + V+ L + + +++F A P F L++ Sbjct: 767 EWESKAARLLTSLDYRNRVRGLTPATSRRLYGKRLRTSVSRMEQFSACPFAHFASHGLKL 826 Query: 856 NFRTEDSE-IPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRF---------RAAG 905 R PD LS+ I + N E + + G Sbjct: 827 KERQLYRLQAPDIGQLFHAALSQMAITFKAQNRSWGSLTPEEAIQAANSAVDELAPKLQG 886 Query: 906 DL-----PYGAFGEIFWETQCQEMQQLADRVIACRQPG-------------QSMEIDLAC 947 ++ YG + L ++ + +L Sbjct: 887 EILLSSKRYGYISRKLKAIVGRASLILGEQARRGSFEPVGQELDFGPGRPLPPLTFELPN 946 Query: 948 NGV-QITGWLPQVQP---DGLLRWRPSLLSVAQ 976 V +I G + +V + L R +Q Sbjct: 947 GCVMEIVGRIDRVDMAEGEQGLLLRVIDYKSSQ 979 >UniRef50_A4IKW6 ATP-dependent helicase/deoxyribonuclease subunit B n=10 Tax=Bacillaceae RepID=ADDB_GEOTN Length = 1167 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 148/1122 (13%), Positives = 304/1122 (27%), Gaps = 203/1122 (18%) Query: 14 EALMEFIVERERLDDPFEPEMI-LVQSTGMAQWLQMTLSQKFGIAANID---FPLPASFI 69 + R+ +DP ++ LV Q + L G I F P Sbjct: 15 TTACLEEIRRQLQEDPKGRTIVYLVPEQMTFQ-CEYALIHTEGTEGMIRAQVFSFP-RLA 72 Query: 70 WDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF---- 125 W + + + ++R + + KLF Sbjct: 73 WRVLQETGGMNR------------------YHVHDVGVQMMIRKIIEQRKQELKLFGRAA 114 Query: 126 -------QLSSKAADLFDQYLVYRPDW------LAQWETGHLVEGLGEAQAWQAPLWKAL 172 QL A+ +Y + + L L + + A +++ L Sbjct: 115 DKSGFVEQLHEMIAEC-KRYCLTPDELRRHAGVLESGSGQPGRRLLADKLSDVALVYEEL 173 Query: 173 VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGL-PSRVFICGISALPPVYLQALQALG 231 + ++ L L + ++I G P ++ L Sbjct: 174 ERSLLGHYLDS-------EDYLRLLVEHIPRSSYLHGADIYIDGFHHFSPQEYMVIEQLL 226 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 + R Y + D L L + Sbjct: 227 HRCRRVTVCLTADRPYDVGMPDELDLFYLPAQ---------------------------- 258 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 L +L + ++ V + ++ A Sbjct: 259 ------------------TYRQLRELALANDIMIESPVVLS----------VNRRHQDKA 290 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 ++EE P + +I + + + E+E + ++ ++ D RDI ++ Sbjct: 291 LAHLEEQFHRRPLLPYEAETDAICLYEAANRRAEIEAVAREIIRLV-RDEGARYRDIALI 349 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 + ++Y ++ VF +PY + ++ HP++E + L +R+ E V Sbjct: 350 IRQTEAYRDLVKTVFFDFD----IPYFMDEKEPMHYHPLIELVRAALETVVTRWRYEAVF 405 Query: 472 ALLDVPVLAARFD---ITEEGLRYLRQWVNESGIR---WGIDDDNVRELELPATGQHTWR 525 + +L + E L +V G++ W D+ G + + Sbjct: 406 RAVKTDLLFPVDGDLAMWREAADKLENYVLAHGVKGEKWTSDERWTYRRYQALDGLNVPQ 465 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 R E + + + A+ G L L ++ L + LE Sbjct: 466 TDEERQFEDKLNEWREALAAPLRRLERRLRRAADGRG----LCTALYLFLEELQIPKKLE 521 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 + ++ + + + +PL+ + L Sbjct: 522 QMSAQAEA------DGRLVEARQHEQAWNAVVDLLDQYVEMLGAEPLPLAEFAKIIEAGL 575 Query: 646 DQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK-- 702 D+ + A V + L R I K ++G+NDGV P ++ G ++ + Sbjct: 576 DRLEFALVPPAIDQVIVAQLDRSRLIDVKYAFIIGVNDGVIPAKVKDEGLVAEVEREQLR 635 Query: 703 -------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 G R + D + AL ++LY++Y + PS L+++L+ Sbjct: 636 ELGVALAPGGREQLFYDPFFVYLALACPSRRLYVTYPLADG-EGKALMPSPLIKQLVQLF 694 Query: 756 GQ---------SHYLPGDEALN----CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 + P ++ ++ + + L DP + Sbjct: 695 PRVSVHLCGNDPFDAPEEKPETFVTVPRATQTYLISQLRAWKRNYGIDPLWWDVYNVLIS 754 Query: 803 AREWLPAASQAGKAHSEFVQP-LPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQ 854 EW QA Q L + + +++F P F L+ Sbjct: 755 HPEWRARVEQAVSGLFYTNQAVLKREWSRRLYGKKIQASVSRMEQFQKCPYAHFASHGLR 814 Query: 855 VNFRTEDS-EIPDTEPFILEG------------LSRYQINQQLLNALVEQ--DDAERLFR 899 + R E PD L Q+++ L + + L + Sbjct: 815 LKERNVFRLEAPDVGQLFHAAIKQIADRVREQHLDWKQLSRSECERLSAEAVERIAPLIQ 874 Query: 900 RFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG---------- 949 + + Y + L++ A E+ G Sbjct: 875 QQVLSSSNRYEYMKRKLKNVVARTTHVLSEHARASGFAPVGFELSFGPGGDLPPLRFQLR 934 Query: 950 ----VQITGWLPQVQP---DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLR- 1001 +++ G + +V + R + E A + L Sbjct: 935 DGTVMELVGRIDRVDKAESSQGVLLRIIDYKSSAKTLDLTEVYYGLALQMFTYLDIVLTY 994 Query: 1002 KDGEWRFPPLAAE-----------QALHYLSQLIEGYREGMS 1032 + P L A QA +L +E R+ + Sbjct: 995 AEQLVGEPALPAGVLYFHIHNPIIQAKQWLDNEMEVARKLLE 1036 >UniRef50_B0KDB8 ATP-dependent helicase/deoxyribonuclease subunit B n=10 Tax=Thermoanaerobacteraceae RepID=ADDB_THEP3 Length = 1149 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 127/1041 (12%), Positives = 287/1041 (27%), Gaps = 178/1041 (17%) Query: 23 RERLDDPFEPEMILVQSTGMAQ---WLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPE 79 + P ++LV + +L T+ + + +F V Sbjct: 27 NDGNSHPL---ILLVPEQFTFEAEKYLLETVEKDRK--MRAQVLSFKTLANRVFTEVGGL 81 Query: 80 IPKE-SAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQY 138 + ++ + + +K+M L + L+ Y + + ++S + F ++ Sbjct: 82 TRQHVNSCGRSMVIYKIMEDLKE--------NLKVYYKASRQQGFIKKISEVITE-FKRF 132 Query: 139 LVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLE 198 V P+ L EGL E + ++ E HQ + + L Sbjct: 133 EVT-PEKLMDTAESIQKEGLREKLRELSLIYGKFDELLHQKYIDE-------EDALTLLA 184 Query: 199 SATTCPPGLP-SRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYL 257 + +I G + P +Y L Sbjct: 185 EKLEYSEQFKGAEFWIDGFTG----------------------FTPKQY--------KVL 214 Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL 317 KLL + R S +N D Y Sbjct: 215 EKLLKKAARVSVTLTMDTSKDSIDNT-------------------------DLFYTTKKT 249 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFH 377 E + + ++ + + + +E+ S + +I+ Sbjct: 250 EDKLLKICYENNISYEKPVDLNEGVPKRFEKNEEMAFLEKHLFSYPYKIYSKDTKNISLF 309 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 + EVE ++ ++ D L DI+V D+ Y I+ +F +P+ Sbjct: 310 KAVNVYSEVEETAREIIRLV-RDENLRYSDIVVTARDLKRYHKLIKTIFSHY----GIPH 364 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 I + +++P++ SL + + E V L ++ +E + +L +V Sbjct: 365 FIDLKLDIKNNPIIVYITSLFEIYLKNWSYESVFRHLKTGFT----NLNKEDISFLENYV 420 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 +GI+ G + + + ++ A+E + Sbjct: 421 LANGIKGGKWKEEWKY-----SFRNRLDKLFDDQDEKEALEKVNTIKNGISEPLNKFYKD 475 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 + L + + +E + ++ + E + I Sbjct: 476 FSNANTVREACEILYNFLVERDIPQRIENLIREFKE------NKEFEIANQYSQIWDIVV 529 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVC 676 ++ + + + + + L L + +I A V + ++ M+S K + Sbjct: 530 DVLDQMVEVMGEEKINIDLFSKILDIGFEAYQIGSIPPALDEVLVTSVDRMKSHNAKALF 589 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKR---------GDRSRRDDDRYLFLEALISAQQKL 727 ++G NDG++P G + +++ ++++L AL S + L Sbjct: 590 VIGANDGIFPASSFEEGILTDEDRQILTSYEVELDRDTKAKVFEEQFLVYTALTSTSKFL 649 Query: 728 YISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG-----------DEALNCDESEARV 776 ISY + PS+++ Q + D + + Sbjct: 650 RISYPIAD-HEGRSLRPSIIISRFKRIFPQITQFSNVIEMDTDEENLHRVSSPDPTFNEM 708 Query: 777 KAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA--HSEFVQPLPFTLPETV-- 832 + + S W + + +S V+ +P + + Sbjct: 709 IKSFKEWDIKDKINSLWLDVYNWYSNKEVWRKRIEKVLEGFNYSNQVRVIPSAKIKRLYK 768 Query: 833 -----PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI-PDTEPFILEGLSRYQINQQLLN 886 + L+++ A P F Q L+ R S PD F+ L+ + L Sbjct: 769 DEINFSVSRLEKYAACPFAYFVQYGLKAKERKIYSFDPPDLGIFMHNVLNE---VSKALE 825 Query: 887 AL---VEQDDAERLFR--------------RFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 E D E Y + + +++ Sbjct: 826 KEDKTWEDLDREYCDEVVNIVVDNMLKGVSEHILKSSPRYEYLSKRLTRVLSNAVWVISE 885 Query: 930 RVIACRQPGQSMEIDL--------------ACNGVQITGWLPQVQ--------PDGLLRW 967 + E+ + + G + +V ++ + Sbjct: 886 HIKRSSFIPSGHEVAFGENQMYPPIKIILSNGEEINLIGRIDRVDVFEKGEESYIRIIDY 945 Query: 968 RPS--LLSVAQGMQLWLEHLV 986 + L + L+ Sbjct: 946 KSGNKELKLEDVFYGLELQLL 966 >UniRef50_C6LH76 ATP-dependent nuclease subunit B n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LH76_9FIRM Length = 1162 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 140/1033 (13%), Positives = 279/1033 (27%), Gaps = 134/1033 (12%) Query: 17 MEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF--GIAANIDFPLPASFIWDMFV 74 + + + P + +++V Q Q L + G NID +F Sbjct: 18 IYSSIIEAAVQSPEKKFLVIVPEQFTMQT-QRELVRLHPDGGLLNIDILSFQRLAHRIFE 76 Query: 75 RVLPEIP-KESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAAD 133 V + K + + +++ +L+ L L Q+ S ++ Sbjct: 77 EVGADKRTVLEELGKTLLLRR-----AASRVQDELKVLKGNLKKMGY---LQQMKSMISE 128 Query: 134 LFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRF 193 L QY + + L L+++ E + Sbjct: 129 L-TQYDIDSEKMERLLQQAEQKPSLFYKLKDIRLLYESFQEELEGKYITA-------EET 180 Query: 194 IETLESATTCPPGLPSRVF-ICGISALPPVYLQALQALGKHI-EIHLLFTNPCRYYWGDI 251 +E L L V I G + PV + L+ L ++++ T + + I Sbjct: 181 LEALCQVARQSAILKGCVVAIDGFTGFTPVQNKLLRELFSLAEQVYVTVTIRAQEEFYRI 240 Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYI 311 + L L + + + + G L Sbjct: 241 RGEHELFYLSKK----TIRSLAHTAQEAGCEILPPVVMEWKTLPRFTKSPELGFLEA--- 293 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 L +Q + + A E + + Sbjct: 294 -YLFGGGKAQWTEPAEEPVR----------------SANPHTAEETARSGEAEPECASSG 336 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 +I+ H +P +E + A+L + +DI V+V D+ SYS +I VFG Sbjct: 337 CAISLHTAANPVQEAHFAARTIRALLRQ--GYRYQDIAVIVGDLPSYSSYIPQVFGEY-- 392 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 + Y + R S+P++E ++L + F V L + I + L Sbjct: 393 --KIAYFMDSTRTVFSNPLVEFLRAVLDMIQQDFTCASVFRYLRTGLCR----IDAQKLD 446 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 L +V +G+R + + L + P Sbjct: 447 MLENYVLAAGVRGFSRWREPFTRAVDFLDEEQLALCEELRSL------------IMEPLL 494 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + + L+ ++ L + R AE E Sbjct: 495 PLVSCMRQARTTAREKTEGLHTLLCHYNIQQQLADMEKQFRA------DGQAELEKEFAG 548 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-AGPVNICTLMPMRSI 670 I I + +A+ L + L ++ R+ A V + L R Sbjct: 549 IYAMVIGIFDKLAELLREEALTLQEYTELLEAGFEEARVRLIPPSADRVQVGDLERSRLT 608 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP---------KRGDRSRRDDDRYLFLEALI 721 KV+ LG+NDG P A G ++ R R+ L Sbjct: 609 DIKVLIFLGLNDGWVPATGAGGGLLSDMERETLMESRVELAPTTRQNSYIQRFYLYLNLT 668 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 +++LY+S D S PS +++ + D + + L Sbjct: 669 KPRERLYLSCSKA-TADGSLLRPSYVMRTIGRLFPGLSVHDEDVCESFSSRVETPQNALA 727 Query: 782 CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET---------- 831 L + + QP W K V+ T E+ Sbjct: 728 YLLEGF-WSIRERQPSGEWLELYNWYRRKEDTKKQVQRLVEAAFLTFDESGIGRKAAREL 786 Query: 832 ------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILEGL--------- 875 + L++F + F Q L++ R E P D + Sbjct: 787 YGEVLVNSVSRLEKFASCAFAHFLQYGLRLQEREEYVFRPVDMGRVFHSAIELYSRKVEE 846 Query: 876 ---SRYQINQQLLNALVEQDDAE--RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR 930 ++I +++ + +E+ E + + A + + L + Sbjct: 847 SGYDWFRIPEEVRDRFIEEAVNEVSAAYGQQILHDSARNEAMIGRMKRIMRRTVWALHRQ 906 Query: 931 VIACRQPGQSMEIDL--------------ACNGVQITGWLPQVQPD---GLLRWRPSLLS 973 + + + E+ +++ G + ++ + + Sbjct: 907 IQSGHFYPANFEVSFSQAEELEAVNIALSPEEKMRLQGRIDRIDVCEKEEQVYVKVIDYK 966 Query: 974 VAQGMQLWLEHLV 986 + Sbjct: 967 SGNTSFDLVALYY 979 >UniRef50_Q2RL78 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=ADDB_MOOTA Length = 1151 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 161/1049 (15%), Positives = 283/1049 (26%), Gaps = 188/1049 (17%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGI--AANIDFPL 64 S + + ++ I+ +IL Q +++ L + G+ + + Sbjct: 12 SGKTRLCLEEIKAILAEGPAGPAL---IILTPEQATLQ-MELDLHRAAGVPGFSRVQVLS 67 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 W +F P L E LR ++ D L Sbjct: 68 FRRLGWRVFQEAGGAAR------------------PHLGEMGKAMALRAVVSAHRDDLGL 109 Query: 125 F-----------QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALV 173 F QL+ A+L Y V D ++E E Q L + L Sbjct: 110 FAPLAGSPGFIEQLAHTIAEL-KLYRVTPADL------DRILERYRETGREQTILARKLR 162 Query: 174 EYTHQLGQPRWHRANLY---QRFIETLESATTCPPGL-PSRVFICGISALPPVY---LQA 226 + + + A Y ++ L + +RV++ G + P LQA Sbjct: 163 DLALVYRELETYLAGRYLDPDDYLTLLAGRLPEAAFIRGARVWVDGFNGFTPQEEAVLQA 222 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 L A+ + + + L DP + L R A + Sbjct: 223 LMAVAEQVTVTLCL------------DPTLRHRRLGETELFHPTGETYHRLRQLALAAGV 270 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE 346 D G P F + Sbjct: 271 RVEDDVCLAGTP-------------------------PRFRE------------------ 287 Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 A A ++E RP + I + + EVE +L + + L+ R Sbjct: 288 --APALAHLEAHFGRWPLRPFRGDAAGIRLVAAANRRVEVEAAAREILRL-AREENLSWR 344 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 + V+V D++ Y I F +P I RR HP++E + L + Sbjct: 345 QMAVLVRDLEPYHDLIVNTFRDF----NIPLFIDRRRPVGHHPLVELVRAALEAVLEDWA 400 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 + V L ++ E + L +V GIR D+ + T Sbjct: 401 YDPVFRYLKSDLVPVPR----EEIDLLENYVLAHGIRGRRWRDSRPWQYGNSRDLETPS- 455 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL--ASLLMQLNIWRRGLAQERPL 584 G A + A L + L + L L Sbjct: 456 -----PPGSAAGETINAIRERASCHLRRFDGALRGRQLTGREITAALFDLLQELGVPERL 510 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 A D + I + ++ E + A ++ L L Sbjct: 511 A------AWSRQAAAAGDLDAAQEHEQIWEGLMDLLEELVLALGDTSLELEEYAAILDTG 564 Query: 645 LDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK- 702 L+ ++ A V TL R + +LG+ +GV P +L ++ + Sbjct: 565 LESLKLRLIPPALDQVVAGTLDRSRQPELQAAFVLGVGEGVLPARLPEDATFSDREREEL 624 Query: 703 --------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 R + +L AL +++ L++SY + PS LV+ L Sbjct: 625 RAAGLELAPTGTLRLFHEEFLAYLALTRSRRYLWLSYPLADA-EGKALSPSPLVRRLRQL 683 Query: 755 IGQSHYLPGDEALNCDE-------SEARVKAHLTCLH-TRMPFDPQNYQPGERQSYAREW 806 + L + + + HL L P P + Sbjct: 684 LPGLREETAGTELPGGDDDLVYLTTPRQAAGHLARLLGRGRPLPPLWQEVYRWLHQDARG 743 Query: 807 LPAA-SQAGKAHSEFVQPLPFTL-------PETVPLETLQRFWAHPVRAFFQMRLQVNFR 858 G + V PL L P + + L+ F P R F L + R Sbjct: 744 QKMLGLLEGGGYRNQVDPLEPELARGLYPRPLRLSISQLETFAGCPFRYFLSYGLGLQER 803 Query: 859 TEDSEIPD-------------TEPFILEGLSRYQINQQLLNALVEQ--DDAERLFRRFRA 903 P E GL +++ A++ Q D + Sbjct: 804 RLYQVDPAGMGQFYHAALKLFVEELGRRGLDWGRLSDNEAAAIISQVVDSLAPALQHEIL 863 Query: 904 AGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNG 949 + YG + +T + M+ L + ++E Sbjct: 864 SSSARYGYLRKKLEQTLQRVMEVLNEHARRGEFRPLAVETSFGCRGKLPPLQLDAGPGRR 923 Query: 950 VQITGWLPQVQ---PDGLLRWRPSLLSVA 975 V + G + ++ G R + Sbjct: 924 VFLEGRVDRIDVARRQGRPYLRVIDYKSS 952 >UniRef50_A8VW70 Beta-lactamase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VW70_9BACI Length = 1157 Score = 297 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 128/1048 (12%), Positives = 281/1048 (26%), Gaps = 180/1048 (17%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPA 66 S + LE + ++ P + LV Q + L + I + Sbjct: 12 SGKSKYLEDVFIDEEMKDPSGPPL---LYLVPDQMTFQAEKRFLKRLGKGTTRIRVTGFS 68 Query: 67 SFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQ 126 + L L + LLR D + ++F+ Sbjct: 69 RLAHMIIQEQGGGA------------------LVHLKQTGVNMLLRKITEDHKSEFRVFE 110 Query: 127 LSSKAADLFD----------QYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYT 176 ++ A D +Y D A E L GL + + + + E T Sbjct: 111 HATGTAGFIDKLESMITECKRYNQSAEDIEAMAEDESLPVGLKDKLYDLSLIMNKISEQT 170 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 + +L IE ++ + + + + G P+ L L + Sbjct: 171 ASVRLASEDDFSL---AIEQVKYSEMLKEAM---IAVDGYHHFSPLEEAFLHELMTSSKQ 224 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 ++ L + +L D + Sbjct: 225 VIMALT---------------------------------LDKLPSADEELDPFDLFFETA 251 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 N + + ++L ++ + E + Sbjct: 252 NTAQRTL-------------------------IAANHLQIGLKPAVHFEERTRFQKKGLR 286 Query: 357 EFSRSDNKRPLDPLDS--SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 N+RP DP D + + + E+ + + ++ + +D V+ + Sbjct: 287 HLEAMSNQRPADPSDDHSGVNIVAAVNKRAEIRFIAREIRRLVRQ-ENYRYKDFAVLSRN 345 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 D Y I+ +F +P + +R+ HP++E SLL + + +DV+ L Sbjct: 346 PDDYRDLIEHIFEEE----QIPVFVDAKRSAIHHPLIEFVRSLLDIVSKNWRYDDVIRCL 401 Query: 475 DVPVLAA-RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 + +T E L G+ G + + + G + Sbjct: 402 KTELTFPIDQSVTREHLDTFENITLALGLN-GYQWYDYEQWNKRLQFYRAAKEGEEDHTI 460 Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD 593 + + ++ + + + S++ L L+ L + Sbjct: 461 TLMHDLHKIMVDPLIQFHDKITSQ----NTVNSIIEALFNLLVALSVPEKLASFRD---- 512 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 A + I ++ +I + A D + + L L+ S Sbjct: 513 --QALDKGRLQEARDHDQIWKELISIFDQASEACGQDKMNPITFNNMLDTGLESISYSII 570 Query: 654 FLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK---------PKR 703 A V ++ R L+G NDGV P F ++ Sbjct: 571 PPALDQVVAASMATSRLSDISCTFLIGANDGVIPMPAEESAFMSDRERVTLLESGHELAP 630 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 + +++YL +A S + +L ISY S + + PS+++ + + Sbjct: 631 AAERQLLNEQYLVYQAQTSPKDRLIISY-LLSDDEGKAKQPSIILNHVKEMFPALKTEIA 689 Query: 764 DEAL--------------NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 E+ + + +++ + L P + R + P Sbjct: 690 VESPADLDISDEDDYFISSPEGTQSFLTERLQRWKRGYPLPDIWWSVYNWYMSERTYAPT 749 Query: 810 ASQAGKAHSEFVQP--LPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTE 860 + + P L T + + L+++++ + F L++ R Sbjct: 750 VRTSLTSLFYDNNPGSLSKTAARGLYGQKMTASVSRLEQYYSCAFKQFANYGLRLREREY 809 Query: 861 DSEI-PDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFR--------------AAG 905 PD + L N + + RR + Sbjct: 810 FRLDAPDIGILFHDALKELTANLKQEGRSFTELSEPEAVRRSKNIVENLAPKINRNILKS 869 Query: 906 DLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG--------------VQ 951 + + L ++ +++E+ V+ Sbjct: 870 SFRLRYILSKLEQVVIRAAMILMEQAKRTGFQPEAVELGFGTGSDLPPLSYTLDDGTTVE 929 Query: 952 ITGWLPQVQ---PDGLLRWRPSLLSVAQ 976 + G + +V R ++ Sbjct: 930 LAGRIDRVDSANTPEGFYIRVIDYKSSK 957 >UniRef50_C0Z546 ATP-dependent nuclease subunit B n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z546_BREBN Length = 1165 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 142/1053 (13%), Positives = 297/1053 (28%), Gaps = 200/1053 (18%) Query: 9 RLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASF 68 + + + M+ + + L P ++LV Q + L+ LP Sbjct: 14 KTESIHRQMQARLREKPLGSPM---ILLVPEQASFQE-EYALA-----------TLPE-- 56 Query: 69 IWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLL-----EREDFTLLRHYLTDDSDKRK 123 L + + ++ +LM L L + +LR L ++ Sbjct: 57 --------LGGVIGTQVLSFGRLAHRLMQELGDLTTVPVDDLGKHMVLRMLLERHKEELN 108 Query: 124 LFQ-------LSSKAADLFDQ---YLVYRPDWLA-QWETGHLVEGLGEAQAWQAPLWKAL 172 +F +++ L + Y V +W L + + A Sbjct: 109 VFGRSATQPGFAAQLGRLISECKSYGVSFTHSENVEW----GGANLNQKIHDLRLIMNAY 164 Query: 173 VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPS-RVFICGISALPPVYLQALQALG 231 Y + + + + + +FI G + L+ ++ L Sbjct: 165 EAYLSEGYCDA-------DDILNRVATMVRDSMYIKQAEIFIDGFTGFTNQELRLIEQLM 217 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 +H + + + + S Sbjct: 218 QH--------------------------------------AKQVTIALTLDPNERDASVD 239 Query: 292 EQDVGNPLLASWGKLGRDYIYL-LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV 350 E + +P L R Y L L ES + LL Q + Sbjct: 240 ELGLFHPTL-------RTYQALTLMARESGVSI------AKPLLLTEAQR--FKSSPWLR 284 Query: 351 AGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV 410 + +T + + EVE + +LL + + +D+ + Sbjct: 285 QVEQVYFQWGDPPIPDQPGRADEVTMLSAVNRRAEVEAVALKLLTL-SREEGYRWKDMAI 343 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 ++ +I +Y+ I AVF +P+ + +R+ HP++E S L + +R+ + V Sbjct: 344 LLREIGTYADEISAVFTEY----GIPHFLDQKRSVMHHPLVELVRSALEVIVTRWRYDAV 399 Query: 471 LALLDVPVLAARFDITEE-----GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 L +L DIT+E + L +V G+ +G Sbjct: 400 FRCLKTDLLL--LDITDEHTARKEIDRLENYVLAHGV-FGYQWAEESPWHFRGQAGAEED 456 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 + + YA L E A + + + + L L LE Sbjct: 457 AQIDELRRKYAAP---------LLSFEKEMKQATGLN-VQEMTLALYNLLIALDVPNKLE 506 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 W + D + + ++ + + +++ L+ L L Sbjct: 507 HWQRKAEN------DGDLDAAQVHGQVWTGLIELMDQVVEVMGDESMNLATFARVLDSGL 560 Query: 646 DQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 + + A V I + R K + LLG+N+G+ P + G +++ + Sbjct: 561 ETIELGLVPPALDQVLIGAMERSRQPDVKALFLLGVNEGIIPLRPKEEGILDEAERERLA 620 Query: 705 D---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 + + + + YL +A+ ++L +S + PS + + + + Sbjct: 621 EMGMSLAPSAKQKLMAEPYLLYQAMTRPSERLILSCALADE-EGKALLPSSVFTRIREVL 679 Query: 756 GQSHYLP--GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE---WLPAA 810 + + + + + + GE + E W A Sbjct: 680 PDIPHQVFYNEPTGQYETDAFLLGHPRRVFRHLLTLLRSMKKTGELPDFWWEVYDWYIRA 739 Query: 811 SQAGKAHSEFVQPLPF-TLPETV---------------PLETLQRFWAHPVRAFFQMRLQ 854 S K + L + P+ + + L+RF + P F L+ Sbjct: 740 SPDVKREQWLLSGLRYFNRPQELDLETSTTLYGKQLKMSVSRLERFQSCPFSHFSSHGLR 799 Query: 855 VNFRTEDSEIP-DTEPFILEGLSRY--QINQQLLNA---------LVEQDDAERLFRRFR 902 + RT D L R ++N+ L + E L R Sbjct: 800 LAERTMYKLERFDVGELFHASLKRAVEKMNEDNLEWSKLTEDNSMQLANVVVEELVPATR 859 Query: 903 AAGDLPYG---AFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN----------- 948 ++ + + L + R +E+ N Sbjct: 860 SSILTRTARYRYLSGKLKRAVGRAIYVLGEHAKRSRFAPVGLEVSFGPNSDLPGLALTLE 919 Query: 949 ---GVQITGWLPQVQP---DGLLRWRPSLLSVA 975 +Q+ G + +V + R + Sbjct: 920 NGVELQLIGRIDRVDQSLDSEVPYLRVIDYKSS 952 >UniRef50_C0CXR8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0CXR8_9CLOT Length = 1216 Score = 295 bits (754), Expect = 9e-78, Method: Composition-based stats. Identities = 141/1080 (13%), Positives = 293/1080 (27%), Gaps = 214/1080 (19%) Query: 17 MEFIVERERLDDPFEPEMILVQSTGMAQWLQ--MTLSQKFGIAANIDFPLPASFIWDMFV 74 + R L+ P +++V Q + + L + GI NID + +F Sbjct: 26 LYEQAIRLSLEQPDRRFLVVVPEQFTMQAQKEIIRLHPRHGI-MNIDVLSFKRLAYRVFD 84 Query: 75 RVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF--------- 125 + ++P L + +LR L+ Sbjct: 85 ELAVKMPVV------------------LDDMGKSMVLRRVSGRKKSGLGLYGSHLGQAGF 126 Query: 126 --QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPR 183 QL S+ ++L QY + P L + L + +++ +Y Sbjct: 127 INQLKSQISEL-CQYGIT-PQDLELLQGETENPLLKQKLGDLGLIFQEFKDYIADHYITA 184 Query: 184 WHRANLYQRFIETLESATTCPPGLPSR-VFICGISALPPVYLQALQALGKHIEIHLLFTN 242 + ++ L L + +F+ G + PV + + L T+ Sbjct: 185 -------EEILDILCRELPRSEMLKNSVIFLDGYTGFTPVQYRI---------VELFITH 228 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS 302 D + + + + LA+ Sbjct: 229 ALDVVCAVTVDYGADPYRESGIQNLFYMSKHTVCR----------------------LAA 266 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA-----VAGVNIEE 357 K G ++ DV IL+ A +E+ Sbjct: 267 MAKAG--------------GVELKEDV------------ILDRRPAWRFAQSPALDFLEQ 300 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 N R + +P+ EV + R+ +++ + L RD+ V D+ + Sbjct: 301 NLYRYNGRAWKGEQDQVKLFCGQTPEEEVRYVKSRIESLV-REQGLRYRDMAVATGDLAA 359 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 Y I F A +P+ + D+++ +P++E ++L F E+V L Sbjct: 360 YGREITRQFDQA----GIPFFMDDKKSILENPMVELIRAVLEAVRD-FSYENVFRYLKTG 414 Query: 478 VLAARFDITEEGLR-YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM----- 531 ++ R + T + + ID + + EL G R Sbjct: 415 LVYDRAEGTADEAQPVWENAAGADSGGEAIDWEEASDGELADVLLGETGGGADRRYSREE 474 Query: 532 -------LLGYAMESAQGEWQSV-----LPYDESSGLIAELVGHLAS-LLMQLNIWRRGL 578 L Y W+ + + L + + +L L R + Sbjct: 475 AAVMTDRLENYVRALGINGWKRWDSQWEAQFKGAENLNLQELNAFRQWILAPLRPLREAM 534 Query: 579 AQERPLEEWLPVCRDMLNAF-----------------FLPDAETEAAMTLIEQQWQAIIA 621 +++ + R+ L + D + + + + Sbjct: 535 SKDATVASVTQALRNYLESMELREKLEEYQAYFAARGLRGDENLAREYGQVYDRVEELFE 594 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGM 680 G + L + ++ V + + R +V+ +G+ Sbjct: 595 RLTGLLGDEKAERKSYAQILDAGFGEIQVGVIPATIDQVMVGDITRTRLDGVQVLFFVGV 654 Query: 681 NDGVYPRQLAPLGFDLMSQKP------KRGDRSRRDD---DRYLFLEALISAQQKLYISY 731 NDGV P++ + + R+D ++ L ++L I+Y Sbjct: 655 NDGVVPQRKNGGSLLGDRDREFFKAHRLELAPTAREDGCMQKFYLYLMLSKPSRRLVITY 714 Query: 732 IGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD----EALNCDESEARVKAHLTCLHTRM 787 GRS D PSVL+ E+ G + + + L Sbjct: 715 AGRSA-DGKSLRPSVLLGEVYKLFPGLTAEDGSTVKWPVQTPRDGKETLIQGLKTYRDLK 773 Query: 788 PFDP-----QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV---------- 832 D ++ Q + W + VQ ++ E Sbjct: 774 EPDAADGALEDSQWERKFLELYRWFFGQEDYREEVKLLVQAAFYSYEERGIGRAAARALY 833 Query: 833 ------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILEGLSR-------- 877 + L+++ + F + L++ R E D + + R Sbjct: 834 GKILQGSVTRLEQYASCAYAHFLRYGLELMERREYELEAVDMGNLFHQSIDRCFQVMKAQ 893 Query: 878 YQINQQLLNALVEQDDAERLFRRFRAAGD------LPYGAFGEIFWETQCQEMQQLADRV 931 + + L + E + + G+ Y + + LA++V Sbjct: 894 GRDWRNLTEEGRQGLVKESVSQVVADYGNTIMMSTARYAYLAGRVERMTDRTIWALAEQV 953 Query: 932 IACRQPGQSMEIDL--------------ACNGVQITGWLPQVQPD---GLLRWRPSLLSV 974 E+ +Q+ G + ++ G L + Sbjct: 954 KRGDFEPAGFEVSFSAVDNLKAMRIALSPDEELQLRGRIDRMDLCEDGGTLYVKIIDYKS 1013 >UniRef50_A6LPC3 ATP-dependent helicase/deoxyribonuclease subunit B n=7 Tax=Clostridium RepID=ADDB_CLOB8 Length = 1159 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 106/749 (14%), Positives = 238/749 (31%), Gaps = 105/749 (14%) Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 + + I + +IE++ S D SIT + + E+E + + +++ Sbjct: 274 LNNAIPYRFKGNLELDHIEKYFFSYPFNEYDKNPESITLYKASNIYDEIERVSKSITSLV 333 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 E+ RDI V+ +ID Y I +F +PY + + S+P++ S Sbjct: 334 REN-GYRYRDISVVCRNIDDYEKIISVIFKDY----NIPYFLDKKIQLLSNPLIVLISSA 388 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 + + E V L + I + L ++ E G++ G + + Sbjct: 389 FEILLKNWSYESVFKYLKSGLT----GIDNSYIDRLENFILEYGVK-GYKWTSKEIVNEK 443 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 + ++L+ ME + + +++ +G + + + + Sbjct: 444 WFRGN-GELTDDKVLIAEIMEEIRYPLMTF--HNKVNGKH-----KVKDICSAIYEFLVD 495 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 + + EW+ ++ + + +E II + + + + S Sbjct: 496 VKVFDRINEWIKNFEEL------GLEDKVKEYSQVESIVIDIIDQAVDVIGEERLEYSEF 549 Query: 638 RDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 L+ E I +A VNI + ++ KV+ ++G+NDGV P G Sbjct: 550 FRILSSGFANEEIGIIPVALDQVNIGDIARIKGRDVKVLYIVGINDGVLPASKKEEGLLS 609 Query: 697 MSQKPKRGD---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 + G+ R++ +++YL AL + + L +SY + PS++ Sbjct: 610 DRDRTTLGEVGINLSSTTRNKVFEEQYLLYMALTISSEYLMLSYPMADF-EGKSLRPSIV 668 Query: 748 VQELIDYIGQSHYLPGDEALNCDESE-ARVKAHLTCLHTRM-----PFDPQNYQPGERQS 801 + + L E++ ++ A + + + FD + +P + Sbjct: 669 ISRIKKIFPNLIEESAIYDLKILENKFGKIIAPIPTFNELIISMRKDFDKEYIEPYWSEV 728 Query: 802 YAREWLPAASQAGKAHSEFVQPLP-------------------FTLPETVPLETLQRFWA 842 Y EW + + L + L+++ Sbjct: 729 Y--EWFKNNDEFRDKVKNIFKGLSYSNIGDKVSKNKLRKLYQNDLEKLVFSVSKLEKYAE 786 Query: 843 HPVRAFFQMRLQVNFRTEDSE-IPDTEPFILEGLSRYQ--------INQQLLNALVEQDD 893 P F Q L+ R PD F+ E L + + L N ++ Sbjct: 787 CPFSYFVQYGLKAKNRKVYEFTPPDLGSFVHEMLDSFTNKVREDGVLWSDLSNEKCKEII 846 Query: 894 AERLFRRFRAAGD------LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL-- 945 + + ++ + + + F + + +A ++ E D Sbjct: 847 SNLIDKKLMDESNSILNSTKKFKYLAQRFKRVISKSVSVIASQIGKGEFEVFKTEFDFGS 906 Query: 946 ------------ACNGVQITGWLPQVQP---DGLLRWRPSLLSVA----QGMQLW----L 982 V + G + ++ DG R +++ + Sbjct: 907 YSSGEAITLDLNDNEKVYLQGRIDRIDKLDLDGETYIRIIDYKTGAKKFDLNEIYYGLQV 966 Query: 983 EHLVYCASGGNGESRLFLRKDGEWRFPPL 1011 + LVY + + D + + + Sbjct: 967 QLLVYLDALIKNSKYIL---DKQVKPGAI 992 >UniRef50_C5RQN7 ATP-dependent nuclease subunit B n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQN7_CLOCL Length = 1151 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 115/1043 (11%), Positives = 301/1043 (28%), Gaps = 154/1043 (14%) Query: 13 LEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG--IAANIDFPLPASFIW 70 + ++ I+ +++ F ++V + L + G + +D + Sbjct: 17 IFEEIKKILIKDKNQKIF----MIVPDQFYF-TAEKNLLEFLGEELCDKVDVLTFKKLGY 71 Query: 71 DMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSK 130 +F +V K +SM LL ++LE L Y + S+++ + Sbjct: 72 RVFDQVGGVSKKHLDDAGRSM------LLYKILEENKKEL--KYFSTISNQKGFVSILGD 123 Query: 131 AADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLY 190 Y + + +GL + + +++ L + ++ Sbjct: 124 IVSELKNYDITTETLKELYSKIEDNKGLKDKLYDISLIYEKLRAAMEEKYLDLEDELSIL 183 Query: 191 QRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGD 250 ++ V+ S+ + ++ + ++ + Y Sbjct: 184 YGKLDEYRDINNA------YVYFDEFSSFTTLQYNIIEKILLKAKVLSISLIHSSQY--- 234 Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 IK + F + + + A ++ + +++ Sbjct: 235 IKSNSDGKIESYSNEGDVFSVTSKTINKLIDIARKINSPLEYKEIE-------------- 280 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 + + + + +L ++++ Sbjct: 281 YKKIKRFNNQELIHLEKIY----MLIHMKN---------------------------TKK 309 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 + I ++ + E+E + +L + D RDI V+ ++DSY I+A+F Sbjct: 310 NEKINININVNSFNEIEEVAKGILEAV-RDRDFRYRDIAVVTRNLDSYDEMIKAIFNEY- 367 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 +PY I ++ +S+ ++ S L + + E V L + ++ E + Sbjct: 368 ---NIPYFIDKKKEIESNKLIVFLKSALEIISKNWSEEAVFKYLKSDLT----SLSREQV 420 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 L + +GIR G + + + +L +L Sbjct: 421 DLLENYALANGIR-GKRKWTKETWDYDFPKELSGGKEKEEILEEINELK-AQVVNPLLKL 478 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 + S A + + + + + + +E W+ R + Sbjct: 479 YDISISKA----KVKEISKIIFQFLQQVGAFEKIENWIQGFRTEGKQLL------ANEYS 528 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRS 669 I + + + L L+ ++ ++ V + ++ ++ Sbjct: 529 QIWNLIIETLDMLVEVLGDAEMSLEEYEKILSIGFEENKMGLIPATIDQVLVGSVERSKT 588 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD---------RSRRDDDRYLFLEAL 720 K++ ++G+NDGV+PR ++ G + + R+ ++++L E Sbjct: 589 NGVKILYIIGVNDGVFPRSVSDEGILNDEDRTVLMENGITLASTTRAAAFEEQFLVYETF 648 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG-------DEALNCDESE 773 +A ++ ISY + PS+LV L + + ++ + Sbjct: 649 TAASDEIIISYPIADF-EGKALRPSILVSRLKNIFKKITIKSDILDVVSMEKVTLPMPTF 707 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW-------LPAASQAGKAHSEFVQPLPF 826 ++ + + + + E+ + + + + + + Sbjct: 708 NQMISAIRAKMEGAEISEYWSEVYKWYHDQEEYKLLKDRIMRGFYYSNQGVIKNKEKIKK 767 Query: 827 TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE-IPDTEPFILEGLS--------R 877 E + + + P F L+ R + D F+ + Sbjct: 768 LYGEDYSVSRFETYVNCPFSYFVNYGLKAKERKLYNLTTLDKGTFLHNVIENFCISVIKE 827 Query: 878 YQINQQLLNALVEQDDAERLFRRFR-----AAGDLPYGAFGEIFWETQCQEMQQLADRVI 932 + + + +Q + L + Y + + + + ++ Sbjct: 828 HASFENIDEDFCQQFSDKVLKETLKIDNSVLNSSNRYQYMANRLKKVLVRTLITITRQIN 887 Query: 933 ACRQPGQSMEIDLACNG--------------VQITGWLPQVQ---PDGLLRWRPSLLSVA 975 S E + N +I G + ++ D L R + Sbjct: 888 NSDFKPISFEAEFDDNREFRPIEISLKDGTKAKIKGKIDRIDILKKDDELYIRIIDYKSS 947 Query: 976 Q--------GMQLWLEHLVYCAS 990 L+ LVY + Sbjct: 948 SKTINLKDVYYGAQLQLLVYLDA 970 >UniRef50_A8FBR0 ATP-dependent helicase/deoxyribonuclease subunit B n=5 Tax=Bacillus RepID=ADDB_BACP2 Length = 1169 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 158/1194 (13%), Positives = 336/1194 (28%), Gaps = 201/1194 (16%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF--GIAANIDFPL 64 S + + ++ + + L P + LV ++ L++ G Sbjct: 12 SGKTTAILEEIKEQLRLDPLGPPI---IFLVPDQMTFL-MEYELAKTSEAGGMIRAKVFS 67 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 W + + N+Q ++ LLR + + DK K+ Sbjct: 68 FTRLAWSILQQTGGA-------NRQFVT-----------STGIQMLLRKVIEEQKDKFKV 109 Query: 125 FQLSS-----------KAADLFDQYLVYRPDWLAQWETGHLVEGL------GEAQAWQAP 167 F+ +S A+ F +Y + P+ + + ++ E Sbjct: 110 FKKASDKPGFVEQIEKTMAE-FKRYCM-LPEEIEKISVESMLSEYTEERRAAEKLHDLHV 167 Query: 168 LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLP-SRVFICGISALPPVYLQA 226 L++ + E+ + ++ L + + ++I G P L Sbjct: 168 LYQQMEEHLQDEYVHS-------EDYLNLLAQQIPSAEEIKGAHIYIDGFYQFTPQQLLV 220 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 ++ L H + Y + L ++ + Sbjct: 221 IEQLLLHAAKVTAAFTVDQSYHDRQPNELDLFRMTGK----------------------- 257 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE 346 + L L D + N H D+ L Sbjct: 258 -----------------------TYFQLYQLAKECGADISETIFERNHRHLYTPDLAYL- 293 Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 E +P +T S + E+E + +L ++ + L R Sbjct: 294 ---------EHQYEQRPVQPYQENTPHLTVSKSASKRAEIEGVARDILDLV-REKGLRLR 343 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 DI V+ +D Y ++ VF +P+ I + Q HP++E S L + + Sbjct: 344 DISVVARHVDDYKDTLKEVFRDYD----IPFFIDGNESMQYHPLIELIRSSLDVIKGNWR 399 Query: 467 SEDVLALLDVPVLAARF---DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 E V + L + E L + G++ + R Sbjct: 400 YEAVFRCVKTEFLFPLEITKNKAREQADQLENYCIAYGVKGERWTNGSRFHYRRFQSLDE 459 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + + M + EW + P + + ++ + ++ + Sbjct: 460 DFRQTDQEIEMEQMLNDVKEW--ITPPLYQLQKRLKNAQKVRDMVEAVYVFLEEIQVPDK 517 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 LE + L A + ++ E + + + L + + Sbjct: 518 LE------KARLEAEEAGRLAEAMQHGQVWDAVIQLMDEFVDMLGDEELSFPLFQQMIDT 571 Query: 644 RLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 L + + + V I ++ R K + ++G+NDGV P + + + Sbjct: 572 GLASLKFALIPPSLDQVFIGSMDLSRMYQVKCMFIIGVNDGVIPARPSDESVLSEDDREW 631 Query: 703 R---------GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV---QE 750 + R D+++L +AL S LY+SY + PS L+ QE Sbjct: 632 LKRAGAELAETGKERLLDEQFLIYQALSSPSHHLYLSYAASDA-EGRSLLPSPLIKYCQE 690 Query: 751 LIDYIGQSHYLPGDEALNCDESEARVKA----------HLTCLHTRMPFDPQNYQPGERQ 800 L+ Q+ Y+ E L DE V L + P + Sbjct: 691 LMPNHQQALYVLDPELLEDDEQLKFVANEHVSLSYTISQLQQWLNQYPISGVWWSVYNYL 750 Query: 801 SYAR-EWLPAASQAGKAHSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMR 852 + + + + +PL + + + + +++F A F Sbjct: 751 MTSPNRDVSKNIMSSLFFTNRAKPLKPNVTKELYGDHIQGSVSRMEKFNACAFSHFASHG 810 Query: 853 LQVNFRTEDS-EIPDTEPFILEGLSRYQINQQLLNALVEQD-------------DAERLF 898 L++ R E PD L I+ L+ + E+L Sbjct: 811 LKLKDRQFYKLEAPDIGQLFHSALKH--ISDTLVEQKKDWKNLTKEDCVTYSRHAIEQLA 868 Query: 899 RRFRAAGDL---PYGAFGEIFWETQCQEMQQLADRV-------------IACRQPGQSME 942 R + L + E + + L++ + P Sbjct: 869 PRLQKEILLSSNRHAYIKEKLQKILIRVSSILSEHAKVSGFSPVGLELGFGGQGPLPPFT 928 Query: 943 IDLACN-GVQITGWLPQVQPDG---LLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL 998 L +++ G + +V L R ++ E VY + L Sbjct: 929 FQLKNGCTMELVGRIDRVDKAEGSKGLFLRIVDYKSSEKGLDLAE--VYYGLALQMLTYL 986 Query: 999 FLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAML 1058 L + + A A + + + + P+ + + + + +L Sbjct: 987 DLTITYSKEWLGIEATPAGILYFHIHDPFIQA---PIPLAEDEIEQ--EIFKKFKMKGLL 1041 Query: 1059 DDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRF 1112 +D K + L++ ++ G D ++ + + +Q Sbjct: 1042 LEDVEAVKLMDQTLESGRSQVIQAGLKKDGSFR---SDSAVLSEDHFHILTQHV 1092 >UniRef50_UPI0001692BDC ATP-dependent nuclease, subunit B n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692BDC Length = 1200 Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats. Identities = 143/1099 (13%), Positives = 290/1099 (26%), Gaps = 183/1099 (16%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID--FPLPASFIWD 71 + ++++ DP + LV Q ++ L ++ I W Sbjct: 19 LDEIRNSLKQKPEGDPL---IYLVPDQATFQ-AELELVSSDNLSGMIRAQVLSFHRLAWR 74 Query: 72 MFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKA 131 + + +LL + L + Sbjct: 75 VMQEEGGIA-----------RLPVDETGKKLLLHKLLHEQEKQLVYFQSTYEQLGFVDHL 123 Query: 132 ADLFDQYLVY--RPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANL 189 LF ++ Y P+ E G + L + + + ++ H L R L Sbjct: 124 NRLFTEWKRYCVTPE-----ELGEYIGRLDG--QNSSLVLQQKLQDLHHLYGAFESR--L 174 Query: 190 YQRFIETLESATTCPPGLPSRVFI-------CGISALPPVYLQALQAL---GKHIEIHLL 239 +++ ++ + +P FI G P L+ ++AL + + + L Sbjct: 175 SGEYLDGEDTLSLLAEQIPQSSFIRSATFWMDGFHGFTPQELRVVEALMKTSRGVTVTLT 234 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 P YY G+ D L + E + +E + Sbjct: 235 LDRP--YYAGERPDELDLFYPTGKTMSSLQELLDQANIGPAELIHLQPKKAPRYEHTT-- 290 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 +L+ LE + + V + Sbjct: 291 -------------MLAYLEQHYDKRIGIGVCTYS-------------------------- 311 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 + +S + + + EVE +L ++ + RD+ V+V +++ Y Sbjct: 312 ------SDEDKESPLQIRAAVNRRAEVEGTAREILHLV-REQGARWRDVAVLVRNMEEYR 364 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 I F +P+ +R+ HP+ E S L + + E V + L Sbjct: 365 ELIATTFSDY----GIPHFFDQKRSVFHHPLSEYLRSALEVISRNWRYEAVFRCVKTDFL 420 Query: 480 AA-----------------RFDITEEG--LRYLRQWVNESGIRWGIDDDNVRELELPATG 520 R I E+ L L + GI+ + +L Sbjct: 421 LPWPLPVEPDSEGEKLLKEREAIREQRRLLDRLENYALAFGIQGRDWTETKPWDKLFKVS 480 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 + + +E + + + L Sbjct: 481 LEDEDSEVVKQRESRELEQLNRTRNQIAEPLLALQKRMARAKTVKQRCEALYRLLLDTHV 540 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 LE W +N E + ++ + + + + L L Sbjct: 541 PERLESWS------MNCVLEGKPEKAREHAQLWDSVIQMLDQMVEMMGEEVLSLDLFAKL 594 Query: 641 LAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 + L+ ++ + V + ++ RS K +LG+N+GV P + G + Sbjct: 595 VDTGLESIQMGLVPPSLDQVLVGSMDRTRSTRIKYAVVLGVNEGVIPAAVPEDGVLTEPE 654 Query: 700 KPKRGD---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 + D R + D++++ AL +KL +SY + PS LV++ Sbjct: 655 RELLLDSGVPMADGGRRKLLDEQFIIYSALSVPSEKLILSYALADE-EGKSLLPSELVKQ 713 Query: 751 LIDYIGQSHYLPGDEAL--------------NCDESEARVKAHLTCLHTRMPFDPQNYQP 796 L + + + + + L ++ Sbjct: 714 LRNLFPDVKEELVLTEPGVLMDSAEHLPFLAHPERVLSYLAVQLKQWMRGTAIASIWWEV 773 Query: 797 GERQSYAREWLPAASQAG---------KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRA 847 + EW S + E L + + ++R+ A P Sbjct: 774 YNWFARQPEWRRRLSVMDDSLLFTNKEQKLPESTSRLLYGQKLRASVSRMERYAACPFSH 833 Query: 848 FFQMRLQVNFRTEDS-EIPDTEPFILEGLSRY--QINQQLLNAL---------VEQDDAE 895 F L++ R E PD LS++ Q+ + + + Sbjct: 834 FASYGLRLQERKIYRLEAPDIGQLFHAALSQFANQLRTEQVEWAGLTPEECGRRSSLVMD 893 Query: 896 RLFRRFRAAGDL---PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG--- 949 +L R + L Y + + L + MEID Sbjct: 894 QLAPRLQGEILLSSKRYHYIASKLKQVVTKAAVVLGEHAKRGEFKPLGMEIDFGPGKDLP 953 Query: 950 -----------VQITGWLPQVQP---DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGE 995 ++I G + +V L R + E + Sbjct: 954 PLVFQLDNGCTMEIIGRIDRVDQAEGSEGLLLRVIDYKSSAASLNLAEVYYGLSLQMLTY 1013 Query: 996 SRLFLRKDGEWRFPPLAAE 1014 + + W P Sbjct: 1014 LDVIITHAKTWLGIPATPA 1032 >UniRef50_B7AS97 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AS97_9BACE Length = 1091 Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 130/1004 (12%), Positives = 285/1004 (28%), Gaps = 164/1004 (16%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAA-NIDFPLP 65 S + ++L + ++ + ++V + + G + D Sbjct: 12 SGKSELLYKSIIKASGEQKDRNFL----VIVPEQYTMATQKKLVQLHPGHSIIRTDILSF 67 Query: 66 ASFIWDMFVRV-LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 +F + L K + K+M LR + + + Sbjct: 68 QRLASRVFAELGLEGQTILDDTGKNLIIRKVM--------ENHRKELRAFAGNLDKTGFV 119 Query: 125 FQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRW 184 ++ S ++L QY + D L + +++A +EYT + Sbjct: 120 SEVKSVISELL-QYAIAPDDMPQIITAVAGNGALADKLTDIEVVYRAFMEYTERDYITS- 177 Query: 185 HRANLYQRFIETLESATTCPPGLPSRVF-ICGISALPPVYLQALQALGKHIEIHLLFTNP 243 + + L + V I G + PV L L Sbjct: 178 ------ESLLSLLAQHVHESELIKGSVIAIDGFTGFTPVQYGLLARLL------------ 219 Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASW 303 + E +E+ + S Sbjct: 220 ----------------------ETAAEVYVTVTIDSNEHINVQDGPE-----------SL 246 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 + ++ I L + ++ P L + +RA +E+ N Sbjct: 247 FAMSKETISSLLRIADESHVEV----APYTLCEHT-----YRFDRAPELAFLEQNMFRYN 297 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 R +I + +P+ E++ + +L + + + RDI V+ ADI++Y Sbjct: 298 GRVYRDEPENIEIYCGITPKEELQFIAAEILRL-TREQGIRYRDIAVVSADIETYGMLAA 356 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 +F +P + +R ++P++E S +++ +S + E + L + A Sbjct: 357 NIFEQND----IPAFVDYKRNIMNNPMIEFMRSGIAVIESGYSYESMFRFLRSGITA--- 409 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 IT L + GIR ++ + + L E Sbjct: 410 -ITPNETDLLENYCLALGIRGRKRW-------YSQWDRNYIKKNREKADLTQLNELRYRT 461 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 + + P D + + + LL L + E + E + Sbjct: 462 VKILEPLDRAYTAASGTTVSVGELLEALYEFVAASDIEHKMNELADRLE------LNEEN 515 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-AGPVNIC 662 + I + ++ E + + L L++ ++ A V I Sbjct: 516 ALASQYRQIYPKVMSLFDEIYSLLGEEKIKRKEFARLLDSGLEEIKVGLIPPTADCVLIG 575 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK---------PKRGDRSRRDDDR 713 + R KV+ G+NDG+ P++ G + R + +R Sbjct: 576 DMQRTRLDNIKVLFFAGVNDGIVPKKSENKGILSELDRYILENASVTLSPDARKKAFIER 635 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 + L KLY++Y D ER PS V+ + + D+ N Sbjct: 636 FYLYMNLTKPSWKLYLTYAA-RGIDARERRPSYFVRTMYKLYPKLSMRTCDDMNND---- 690 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP 833 T D + + + + A Sbjct: 691 --------MWLTIPKADKEWNIKDSQINLVQAAADALYGTDVRE---------------S 727 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILEGLS---------------- 876 + L++F + F + L ++ R + DT + + + Sbjct: 728 VTRLEQFASCEFAHFLRYGLGLDERDVYTISASDTGSILHKSMECISSEVIRSGMSFADM 787 Query: 877 RYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ 936 + + +++ +V+ AE F+ + E E + + + ++ + Sbjct: 788 KDEQRHEIVGRVVDTVAAEYGNAVFKDSSRN--EYMIEKVKELTQRTVWAIGRQLEQEQF 845 Query: 937 PGQSMEIDLACN--------GVQITGWLPQVQPDGLLRWRPSLL 972 +S E+ + V++ G + ++ + Sbjct: 846 VPESFEVRFSLPMNESVSKRKVELVGSIDRIDVCEDGDNIYIKI 889 >UniRef50_B0NWV1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NWV1_9CLOT Length = 1126 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 125/994 (12%), Positives = 280/994 (28%), Gaps = 171/994 (17%) Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQ-----SMSWKLMTLL-----PQLLEREDFTLL 111 F +P + +++ P+ FN +++++ L L + ++ Sbjct: 44 FIVPDQSTLNAQKQLVTRHPRHGTFNIDVVGFFRLTYRVFEELSYIPKDLLEDEGKSMVI 103 Query: 112 RHYLTDDSDKRKLFQLSSKAADLFD----------QYLVYRPDWLAQWETGHLVEGLGEA 161 R + ++ K+F S K D QY V D L + G EGL Sbjct: 104 RKIMEQHKEELKVFASSMKKQGFIDELKSFFAEVYQYDVSMED-LKKITDGMKEEGLRSK 162 Query: 162 QAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVF-ICGISALP 220 + + +Y + + ++ ++ L L + F + G + Sbjct: 163 MEDILLVMENFEDYIKERYL-------ISEQLLDVLAQKVEQSEKLKNATFYLDGFTGFT 215 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 P+ + L+ L K + Y G D Y+ Sbjct: 216 PIQRKVLEKLLKIGK---------NVYVGLTLDGRYVRSQYREYE--------------- 251 Query: 281 ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ--ELDAFVDVTPDNLLHNI 338 L A K + I L D + ++ + D L ++ Sbjct: 252 ------------------LFAMSKKEKYELIKLAQDAGTPVMPDIICWPDERDSKELRHL 293 Query: 339 QSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 + +I I +P++E + + + Sbjct: 294 EQNI-----------------ERYPYEIYKDEPEDIKIRCFMNPRQESRTVANEI-ERFV 335 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 + +DI+V+ AD+DSY ++ F ++PY + R ++P +E +S+L Sbjct: 336 REEGYRYKDIVVLTADLDSYQNELEKSFDDL----HIPYFVDVNRKLLNNPCIETLLSVL 391 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + F + V L + T E +L +V GIR + +L + Sbjct: 392 KMIQKDFSYDMVFRYLKSGFS----NFTMEEADFLENYVLACGIRGFARWNRPFASKLFS 447 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 L + + + + L+ L + L Sbjct: 448 DEDVGRAEALR--------------IRFIEEVGTLKTGLKRRGSTVKRKLIYLYEFLETL 493 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 E + + + D A + +Q ++ + + + Sbjct: 494 DVEGKMVKKQEMFEA------SGDLIAAATYAKVYEQVIDLLEQMAEILGEEKLSYDDFL 547 Query: 639 DELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 L L++ +I + V I + R+ K++ LG+N+GV P G Sbjct: 548 SVLESGLEEMQIGVIPPSLDQVMIGDMKRTRTEEVKILFFLGINEGVIPAANGGGGVVND 607 Query: 698 SQKP---------KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 Q+ G + +++ + +LY+SY N+ PS + Sbjct: 608 HQREVLETYGINLAPGIKQSAYMEQFYLYLTVSKPTDRLYLSYRMMDAAGNN-NRPSYFI 666 Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ------------NYQP 796 + + + +E + ++ + M FD + Y Sbjct: 667 ERIQRIFPKLKVTMQEEEVQTGYTKEEALDQMILCLQEMEFDERDDDPEKMKWMQTLYHA 726 Query: 797 GERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQ 854 + +++ A +A + + +T+ + +++F F Q L+ Sbjct: 727 LKELEPVGDYVDARFYTNQALPLSKELIHDLYGDTISGSVTRMEKFAGCAFSHFMQYGLR 786 Query: 855 VNFRTEDSEIP-DTEPFILEGLSR------YQINQQLLNALVEQDDAERL---FRRFRAA 904 + R +P D + + ++ + E+ ++ Sbjct: 787 LRKRLVHEILPTDMGKVFHKTMELVGKRSDWKFADDASRDEFVELMVEQAVTDIQKELFE 846 Query: 905 GDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQ------------- 951 E + + + + + EI Sbjct: 847 SSHRNEYVLERMKRISKRAVWAMEQHIKRGDFTPEEYEIAFGEENHLDSMTFALEDGEKM 906 Query: 952 ----ITGWLPQVQPDGLLRWRPSLLSVAQGMQLW 981 + + ++ D + + + Sbjct: 907 FFSGVVDRMDSIEDDENKYLKIIDYKSGKQKFDF 940 >UniRef50_A8STZ1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8STZ1_9FIRM Length = 1258 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 118/1068 (11%), Positives = 279/1068 (26%), Gaps = 172/1068 (16%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQ--KFGIAANIDFPL 64 S + + + + + +V + + +++ + G + NID Sbjct: 21 SGKTEYMLKTIIEESMLHDDMS----YLYIVPEQFSMEAQRDIVTRHPRHG-SMNIDAIG 75 Query: 65 PASFIWDMFVRV-LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD--DSDK 121 + +F + + F K + +++ + ++D + +Y+ D+ Sbjct: 76 LNRLAYRVFDELSINPGQVLEDFGKSMLVKRIL-----MENQDDLLMYGNYMDKMGFVDE 130 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 K S ++LF QY V R + E ++ L + + Sbjct: 131 MK-----SMMSELF-QYAVDREEIDMAMEQMDSESST----------YRKLHDIRLIYEK 174 Query: 182 PRWHRAN----LYQRFIETLESATTCPPGLPSRVFIC-GISALPPVYLQALQALGKHIEI 236 H AN + ++ + L + + G + PV ++ + L H Sbjct: 175 FEEHNANDQYIVAEQLSQLLAANVEKSQFISKSHMYFDGFTGFTPVQMKLVTQLMSHA-- 232 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 + DI Sbjct: 233 ------ASVTFAFDIDPDRIGLAKPKEYE------------------------------- 255 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 +L ++ I + + +D DN++ Q +I E Sbjct: 256 ------LFRLTKETIAAICKAAADVHVDIL-----DNVVMCGQGEIPYRFRDDPCLAAFE 304 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + ++ SI + E + ++ ++ + +DI V+ D+ Sbjct: 305 RNIFRYPHQKINGAADSIKLVRTDRARDEALYVASQIRKLV-REKGYRYKDIAVVAGDLH 363 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + + + A + +P I + A + P + + L++ F V LL Sbjct: 364 DVAGY----YRQAMDEYRIPVFIDENTALRGDPCSDTVRAFLAVMSDNFSFNSVFRLLKS 419 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 + + + + + + +R G + + + R ++ Sbjct: 420 GMTEVAY----MDVERMENYALKRNLR-GYKSWLKEITDKNNSDYAQEMDSIRRQIVSIF 474 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 E ++ P + + + +L + L LEE + Sbjct: 475 GEDCIDVYKPSSPNSKD---------TVTNYTKELYNFLDELHVCEKLEERRKRLYE--E 523 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 F + A I + A+ + + + + + L + I Sbjct: 524 KLF----DEGDAYGQIFDKIVALFDKVVTILGDEKMTVKEYAGVLEAGISDMEIGIVPPT 579 Query: 657 -GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP---------KRGDR 706 V + + R K + G+N+G+ P+ + D+ Sbjct: 580 IDRVVVGDMTRSRLNHVKALFFTGVNEGIIPKPAKKGKILSNGDRQNLEKCGVTLAPSDK 639 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA 766 + +++ +L LYI + N PS LV + + D Sbjct: 640 TNAYIEQFYIYTSLTKPSDNLYIVFRKMGEDMN-AVGPSYLVDRIRNIFPDIEIEDYDLD 698 Query: 767 LNCDESEARVKAHLTCLH-------TRMPFDPQNYQPGERQSYAREWLPAAS----QAGK 815 E+ +L + T Q G YA WL A + Sbjct: 699 SQIPETVNGALRYLVSRYDEVGSDGTLQAVKRLIEQQGGNTEYA-TWLGAMQSGYDYVNE 757 Query: 816 AHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT-EPFIL 872 + + + + + L+++ + F Q L + R + Sbjct: 758 TKTLSPETVRLLYGTELTESVSKLEKYAECQFKYFLQYGLGLMDRETYQLNAANVGIILH 817 Query: 873 EGLSR---------YQINQQLLNALVEQDDAE------RLFRRFRAAGDLPYGAFGEIFW 917 + + + + E + Sbjct: 818 SSMQKMFEYIKTKCGNNWADITETELADRAVEFVDASADDEAAEYFEDSSRAAYVKKFLE 877 Query: 918 ETQCQEMQQLA-------------DRVIACRQPGQSME---IDLACN-GVQITGWLPQVQ 960 + + + L +R + G +E L + + G + +V Sbjct: 878 DIAVRTAKTLRTFVLCGDMHPENFERYFDTSKLGDGIENYIFKLPNGMTMSLKGVIDRVD 937 Query: 961 P---DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGE 1005 DG + ++ + L + + Sbjct: 938 EYVSDGDVYFKIIDYKSSDQKIDKDRVLAGLQMQLVTYGAIAYELEKR 985 >UniRef50_C0CPC7 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CPC7_9FIRM Length = 1111 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 136/1038 (13%), Positives = 285/1038 (27%), Gaps = 158/1038 (15%) Query: 17 MEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF---GIAANIDFPLPASFIWDMF 73 + + RE ++ P +ILV Q Q L Q GI NID + +F Sbjct: 18 IYQKIIRESMEHPDRQYVILVPEQFTMQT-QKRLVQMHPGGGIL-NIDVLSFERLAYRVF 75 Query: 74 VRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAAD 133 V + +S+ +L ++++ + L YL K Q Sbjct: 76 EEVGGDDAPLLEETGKSL------VLQKIVQDKKKEL--PYLGVQMKKPGCIQEMKSLVS 127 Query: 134 LFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLY--- 190 QY V + L + QA L L + R + + Sbjct: 128 ELMQYDV----------GEETLGELVKRSEDQALLHCKLQDIHRIYEGFREYLKERFLTG 177 Query: 191 QRFIETLESATTCPPGLPSRVFI-CGISALPPVYLQALQAL---GKHIEIHLLFTNPCRY 246 + + L +F+ G + P+ + ++ L G+ + + + Sbjct: 178 EEVPDVLCRVIEKSKKFQGGIFVLDGYTGFTPIQNKLIRELMLLGEQVYVTVTM------ 231 Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKL 306 D+K K L + GK+ Sbjct: 232 ---DVKAQRLSGKYQ-------------------------------------LFSMSGKM 251 Query: 307 GRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRP 366 + L + + E + +V ++ +E+ ++ Sbjct: 252 RDQLLKLAGEARVAVEKEQWVLPGENSRFGK-----------NPELNFLEQHLFRYHRVV 300 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 + ++ +P +EV+ +L ++ + +I V+ D+ SY + + VF Sbjct: 301 YEREPQALALTRWENPLQEVKGTAAEILRLV-REKGYRYGEIAVITGDLPSYGTYARQVF 359 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 A +PY I ++ + +P +E + + + RF E L + ++ Sbjct: 360 SQA----QIPYFIDEKHSILMNPFVEFLRAAVEMIVDRFSYESCFRYLRCGMS----SLS 411 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 E + L +V GIR P + L R + ++ Q Sbjct: 412 LEEIDELDNYVTALGIRGYSKWKETWVRLYPGLDEERILE-LNRYREQF-LKEISWLVQG 469 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 + + E L + + ++ ++E L D E Sbjct: 470 ---FRGGVKTVRERSCALYQFISD-----NEMQEKLKIQE--------LEFAGRKDKAME 513 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLM 665 I ++ + + + V + L L + +++ + V + + Sbjct: 514 KEYAQIYGIVMRLLDKMVEILGDEKVSAREYQQLLEAGLTEAKVALIPPSSDQVLVGDME 573 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP---------KRGDRSRRDDDRYLF 716 R KV+ LG+N+G P+ + G + R R+ Sbjct: 574 RTRLKEIKVLFFLGVNEGNIPKDSSRGGLLTQMDREFFQEEKIELAPDARELLGQSRFYL 633 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL-----PGDEALNCDE 771 L Q LY+SY + + + LV + + Sbjct: 634 YLNLTKPQDFLYLSYSQANAK-GEGLSAAYLVGTIQKLFPALRLRCGQGSSLEGLQRPSG 692 Query: 772 SEARVKAHLTCLHTRMPFDP-----QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 S L + YQ E L A + + + Sbjct: 693 SLDYFLEGLQEYEYGQETKVWRELYRWYQKDESYRPQVNRLVEAFFSENPQDRISKAVAK 752 Query: 827 TLPETVPL---ETLQRFWAHPVRAFFQMRLQVNFRTEDSEI-PDTEPFILEGLS------ 876 L V L+++ A F + LQV R + D + + L Sbjct: 753 ALYGEVSPYGATRLEQYAACAFAHFLRYGLQVTERVQYEFSGMDLGNVMHKALEIFARKV 812 Query: 877 ------RYQINQQLLNALVEQDDAERLFRR--FRAAGDLPYGAFGEIFWETQCQEMQQLA 928 +++++ LV + E + L Sbjct: 813 RDQRLSWGELSREDRERLVSESLQEVTEDYGNTILHSCARNEYLIRRTQRVLNRTAWALQ 872 Query: 929 DRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW--LEHLV 986 +++ + E+ + + + + + + L H + Sbjct: 873 EQLRRGDFQPEGFEVAFEGGRI---DRVDICEDENKVYVKVMDYKTGNVSFDLVALYHGL 929 Query: 987 YCASGGNGESRLFLRKDG 1004 ++ L + + Sbjct: 930 QLQLMVYLDAALLVEQKK 947 >UniRef50_D2LU04 ATP-dependent nuclease subunit B n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LU04_BACS4 Length = 1171 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 131/1041 (12%), Positives = 288/1041 (27%), Gaps = 172/1041 (16%) Query: 17 MEFIVERERLDDPFEPEMI-LVQSTGMAQWLQMTLSQKFGIAA-NIDFPLPASFIWDMFV 74 M + + + DP +I LV Q +M L Q I + + Sbjct: 18 MLNNMIDDAIKDPQGATIIYLVPDQMTFQS-EMQLVQSKQRGMTRIQVLSFSRLALRVLQ 76 Query: 75 RVLPEIPKE-SAFNKQSMSWKL-------MTLLPQLLEREDFTLLRHYLTDDSDKRKLFQ 126 + + Q + K+ + + + F L + K + Sbjct: 77 ELGGITKQHIQKTGVQMLIRKIVETEKKSFKVFSKASDTNGFI---DQLEQMITELKRYD 133 Query: 127 LSSKAAD-LFDQYLVYRPDWLAQWETGHLVEG-LGEAQAWQAPLWKALVEYTHQLGQPRW 184 +S AD L +QY + L Q E E L E ++ L ++ Sbjct: 134 VS---ADTLTEQY-----EALEQRENKRPSEQILQEKLHDIGIVYNNLGKHFKDEYVGA- 184 Query: 185 HRANLYQRFIETLESATTCPPGLPSR-VFICGISALPPVYLQALQALGKHIEIHLLFTNP 243 + ++ L L +FI G + P L+ L I+ +L Sbjct: 185 ------EDYLHLLSEKVAHSNYLKQSHIFIDGFHSFTP--LEML-----VIQELMLH--- 228 Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASW 303 C + L R + A L D + Sbjct: 229 CTH-----------------------TTFSFTLDRHYDTAEVLNELDLFFETAKSYQTI- 264 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE--LENRAVAGVNIEEFSRS 361 +V ++ L + IL+ L ++ A ++E+ Sbjct: 265 -----------------------QNVCREHNLEVNRPFILQMSLRFKSKAIAHLEKNYEI 301 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 + D I + EVE + +L ++ D + ++I++++ +I Y+ Sbjct: 302 RPSPVYETNDG-IRVISAVHRRSEVEGIAREILHLV-RDKSYRFQEIVLILRNITDYTDL 359 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 +Q VF +P + +R+ +HPV+E S L + + E V L +L Sbjct: 360 LQTVFEDY----GIPLFMDQKRSMLNHPVIEFIRSSLEVIYGNWRYEAVFRCLKTDMLFP 415 Query: 482 RFDI---TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 E + L +V GI+ G+ + + + Sbjct: 416 LESHVSEMRERVDQLENYVLSYGIK-GVRWYDKKPWSYRRVKTSADGERKRTTAEDEFEQ 474 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 + + + + + +E ++ Sbjct: 475 EINQLRNELTKPLIWLQKQMKASKTVTEKCETIYHYLVMCQIPEKIERMRN------DSV 528 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-G 657 + + + ++ + + + V L + + ++ + + A Sbjct: 529 ASEELQRAKEHDQVWSAIVELLDQMVEMAGDEDVSSELYKKMIDTGVESMKFAIIPPAID 588 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK---------PKRGDRSR 708 V + + R + +LG+NDG+ P + ++ + Sbjct: 589 QVIVADMEHSRLSNIRCAFILGVNDGIIPAKPDEGSIVTEEERDTLAQAGINLAPSSTRQ 648 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 ++ +L A +A + LY +Y + PS++++ + D+ Sbjct: 649 LLNETFLMYLAQSTASELLYFTYPLADE-EGKSLQPSIVLKRIKDFFPSLEEELWFHEPT 707 Query: 769 -------------CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW-------LP 808 D++ + + L + W L Sbjct: 708 DMTDEEQFFFINGSDKTLSYLTFVLQSWKKGYSIPSFWWDVYNWYVANENWNFKVKQVLH 767 Query: 809 AASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIP 865 + KA + + + ++++ + F L++ R E P Sbjct: 768 SLFYKNKAQQLSKHTSKELYGDHLVTSVSRMEQYQSCAFAQFANYGLRLKERETYKLEAP 827 Query: 866 DTEPFILEGL------------SRYQINQQLLNALVEQDDAERL--FRRFRAAGDLPYGA 911 D L Q++++ + L ++ E +R Y Sbjct: 828 DVGTLFHAALKEMADYLRRNGKDFSQLSKEECSTLAKKIVEELAPKIQREILLSSNKYHY 887 Query: 912 FGEIFWETQCQEMQQLADR-------------VIACRQPGQSMEIDLACN-GVQITGWLP 957 + E + LA++ Q ++ L +++ G + Sbjct: 888 IKQKLEEVVARASHVLAEQSRSSGFSPIGLEVAFGENQDLPPLQFQLQNGTTMELVGRID 947 Query: 958 QVQP---DGLLRWRPSLLSVA 975 +V L R + Sbjct: 948 RVDMAEGRDGLYLRIIDYKSS 968 >UniRef50_UPI0001BC38B0 ATP-dependent nuclease subunit B n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC38B0 Length = 1097 Score = 288 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 117/1005 (11%), Positives = 278/1005 (27%), Gaps = 147/1005 (14%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQM--TLSQKFGIAANIDFPLPASFIWD 71 + + +E +P + + +V Q + + G+ NID + Sbjct: 15 TEYVYSDIVKEACANPDKKYVFIVPEQSSLQAQKRVVRMHPSHGV-FNIDVLTFGRLCYR 73 Query: 72 MFVRV-LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSK 130 +F + + K + K++ + + ++++ S Sbjct: 74 VFEELQIELKETIDDTGKNLIVRKILNNIKSDFRIIKAGRRQGFVSEMK---------SM 124 Query: 131 AADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLY 190 ++L QY + PD L + + L + + ++ Y + L Sbjct: 125 ISEL-KQYGIT-PDMLKEIAVSAGSDRLRDKLEDISLIYSEFENYIRDRFVTVEDKPELL 182 Query: 191 QRFIETLESATTCPPGLPSRVFIC-GISALPPVYLQALQALGKHIEIHLLFTNPCRYYWG 249 RFI+ L + G + PV + ++ + Sbjct: 183 YRFIDN-------SDLLKGSTVVFDGFTGFTPVQYRLIEKIA------------------ 217 Query: 250 DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD 309 + + N D + +D Sbjct: 218 --------------LQAENIIVTVTISSPAINNINTDMGMDELFY-----------MSKD 252 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR-AVAGVNIEEFSRSDNKRPLD 368 I L + + + L+ I+SD + R + A +EE N Sbjct: 253 TIRKLGVIADNVRIPF--------LMQRIESDHSKYRFRNSPALNFLEENIFRYNGSTFG 304 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 I + + E++ +L + DI V++ D D+++ +F Sbjct: 305 GSTEDIHISEHLNGKEEIQYAAAAILKEV-RTHGYRFNDIGVILGDKDNFANETARIF-- 361 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + +P+ + ++R+ +P++E +++L RF E V +L + + Sbjct: 362 --KESGIPFFMDNKRSLIGNPMVEYIRGIIALIKERFSYEAVFRVLKNGLC----GFERD 415 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + ++ GI G D R E + GL + E Sbjct: 416 KVNIFEDYILAFGIN-GFD----RYCEKFVRAYKSKEMGLDVI--NEVREDFCCLISEFY 468 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 ++ V + + + L E + + D D + Sbjct: 469 SDMTKGTKASDYVNAVYDFME-----------KENLYEEMKMLADNTE-----DEDKAEE 512 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPM 667 ++ + + + + + ++ ++ + V + L Sbjct: 513 FRKSYGHVVTLLERIYDMLGDEPMTVKEFAEIMDAGFEEIKVGIIPPSNDCVMVGDLERS 572 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD---------RSRRDDDRYLFLE 718 R KV+ +LG N+G+ P+ G ++ D + + + Sbjct: 573 RIDNIKVLFVLGANEGIIPKTGDNHGILSEDERMTLSDMQIVLSPTPKEKVFMQNFYLYL 632 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE------- 771 + LY+SY GR D E PS ++ + D Y P + Sbjct: 633 NFTRPENTLYLSY-GRYNDDGKEIRPSRVIGIISDMYDIKPYHPDITDFLTNRQNSFHLV 691 Query: 772 SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET 831 S+ + ++ + + ++ + + + E Sbjct: 692 SDYAKIKDYDADKNLAAVISYFVNDDVYGNIIKKIIDSFNENVMSDNLTKEAAKMLYSEN 751 Query: 832 V--PLETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIPDTEPFIL------------EGLS 876 + + ++ + F L + R E D GL+ Sbjct: 752 LTASVSRIETYAGCAFSHFLTYGLGIGERQEHKITNIDIGDIFHKTLEYMGCTLMENGLN 811 Query: 877 RYQINQQLLNAL--VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC 934 ++ + V D ++ + + + + +++ A Sbjct: 812 FGSLSDEERKDFVNVAFDKITADYKYSFFKESAANEFLKMRLSDIVNRTVWAMGEQINAG 871 Query: 935 RQPGQSMEIDL--ACNGVQITGWLPQVQ---PDGLLRWRPSLLSV 974 + E + NG+ + G + ++ +G + Sbjct: 872 SFIPAAFEHNFIRNINGMTVNGKIDRIDIASENGSNYIKIIDYKS 916 >UniRef50_B6G1B7 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1B7_9CLOT Length = 1158 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 91/693 (13%), Positives = 218/693 (31%), Gaps = 85/693 (12%) Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 ++E + S I + EVE + + + + +DI Sbjct: 288 EELQHLERYYNSYPYSIYQKKTEKIRIREYSNLYNEVEEVAKEIANDIIDGR-YRYKDIT 346 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 + +IDSY ++++F +P+ I+ + +++P++ IS+L + R+ E Sbjct: 347 IAARNIDSYESLVKSIFSEY----KIPFYINKKSEAKNNPIITMIISVLEMKKRRYGYET 402 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 + L +L D TE+ + L +V +GI ++V E LP + Sbjct: 403 MFRYLKSGLL----DFTEDEISLLENYVIANGISGNKWFEDVWEYRLPNSFYEYEESEEE 458 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 + + +DE L ++ + + L + + +E + Sbjct: 459 LETKKRINDIKNRVIAPIKRFDE--KLSSKNRKTVEDICRYLYEFLEDINIFEKIENTID 516 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 + R+ E+ A + + ++ + + + + L + LD+ Sbjct: 517 ILRE------KGMLESAARYSQVWNTVSDLLDQLVEIMGDEKISLERFIRIVNIALDEYE 570 Query: 650 ISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD--- 705 + + V + + M + K + L+G DGV+P G S + K D Sbjct: 571 LKTIPPSIDQVTVTEVDRMNNPNTKHLYLIGTVDGVFPMPSKENGLLSDSDRGKLSDMNV 630 Query: 706 ------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI---- 755 R R ++++L +A+ + KL +SY + + S+++ + Sbjct: 631 ELDKDSRKRVFEEQFLVYKAITATSDKLTVSYPIAD-SEGKTQRASIIISRIKKLFKYVD 689 Query: 756 -----------GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 + + + ++K E Sbjct: 690 IKSYFLEGVYEEEDLKEVNSKIPTFNTMVDKIKEAADKDFEN-GISDIWKDTYEYYLNDD 748 Query: 805 EWLPAASQAGKAHSEFVQPLPFTLPE--------TVPLETLQRFWAHPVRAFFQMRLQVN 856 + + + Q + T+ + L+++ + P F + ++ Sbjct: 749 RYNDITKRIVEGIDFTNQFEYVDEDKIKELYNSKTISVSRLEKYASCPFAYFIEYGMKAK 808 Query: 857 FRTEDSE-IPDTEPFIL------------EGLSRYQINQQLLNALVEQDDAERLFRR--F 901 R E PD F+ +G++ ++++ + + V + E + + F Sbjct: 809 DRKEYLFTAPDVGSFVHKVIENYSKTMHKDGITWHEVDDKYIELRVSEMVDELIAKIPGF 868 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG------------ 949 Y ++ +AD++ R E++ Sbjct: 869 ILESSPKYKYLAHRLKVLITVSIKIIADQIKQGRFEPDDYEVEFGKKRKYPSIQVEYKEN 928 Query: 950 --VQITGWLPQVQPD----GLLRWRPSLLSVAQ 976 V++ G + ++ R + Sbjct: 929 EIVELIGKIDRIDKYINEENKEFVRIVDYKWGK 961 >UniRef50_A0AL19 ATP-dependent helicase/deoxyribonuclease subunit B n=20 Tax=Listeria RepID=ADDB_LISW6 Length = 1157 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 122/1044 (11%), Positives = 286/1044 (27%), Gaps = 190/1044 (18%) Query: 62 FPLPASFIWDMFVRVLPEIPK-----ESAFNKQSMSWKLMTLLPQLL-----EREDFTLL 111 F +P + M L + F+ ++WK++ L + ++ Sbjct: 35 FIVPDQMTFQMETSFLNKESLSGMLGTQIFSFSRLAWKILQETGGLSKTFLSQTGIEMVI 94 Query: 112 RHYLTDDSDKRKLFQLS-------SKAADLFDQYLVYRPDWLAQWETGHL--VEGLGEAQ 162 R D DK K+F + S+ A LF + + +A E + + + Sbjct: 95 RKAALDQKDKLKIFSKATSRKGFYSELAKLFKE-MKQEEVSVADLENSAINMSKSVTNKI 153 Query: 163 AWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGL-PSRVFICGISALPP 221 + +++ E + ++ L L + + I G ++ Sbjct: 154 HDISLIYQKYEELLAGKFLEN-------EDYLRLLADKIIESDYLNQTEIIIDGFTSFSK 206 Query: 222 VYLQALQALGKHIE---IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFR 278 L ++ L + + + L P + K L Sbjct: 207 QELTVIEKLMEKCDKVTVSLTLNVP------------EIQKGLEEYNMFKQSTEAYFALL 254 Query: 279 DSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNI 338 + ++ + + N S D + L+D+ + + F + D +H Sbjct: 255 EMAKLNKISVESDKLFLENKRAKS------DSLAFLADVWGNNKFVTFEEKPQDLAIHQ- 307 Query: 339 QSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 ++ + E+E + + + Sbjct: 308 ----------------------------------------ANNRRAEIEGIAREIRQL-- 325 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 +D+ ++ +I Y + V S +P I +RA HP +E S + Sbjct: 326 TLKGYRYQDMAILTRNISDYDVLCETVMESFD----IPIFIDKKRAMAKHPFIEFIRSSI 381 Query: 459 SLPDSRFVSEDVLALLDVPV---LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 + E + + ++ I L +V E+GI+ + Sbjct: 382 DAILFNWKYEPIFQAVKTEFFFDVSENTSIMRRKADILENYVLENGIQNKWKWE------ 435 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA---------- 565 + W + R L + E ++ +E LI E + L Sbjct: 436 ----KEGDWIYRKIRGLSTNLLPQTDEELETQAIINEMRNLIVEPLSILENNLAKARTGT 491 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 M L + + LE W + E ++ E + Sbjct: 492 EFAMALYHFLEQVKAVEHLESWRQTAEE------NGYLELAREHEQAWSSVSELLDEFVE 545 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGV 684 +++ ++ + +A LD S + + + + + + KV+ +GMNDG+ Sbjct: 546 VLGEESLDINSFAEIVATGLDALEFSLLPPSLDQIVLSDMENAKLLDMKVIFAIGMNDGI 605 Query: 685 YPRQLAPLGFDLMSQK---------PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 P + G + K ++ ++ L + + KL++SY Sbjct: 606 MPLRQKDKGILSDQDRDSLRAENSNLKPSAKNNIGEEDLLAYKIISLPSDKLFLSYPAAD 665 Query: 736 IQDNSERFPSVLVQELID---------YIGQSHYLPGDEALNCDESEAR----VKAHLTC 782 + S ++++ Y+ L +E + S+ + + L Sbjct: 666 E-EGKVLSESNYLRKIKGQFKKLNEEVYLTDPSLLSDEEQSSYIRSKQATLGLLTSQLQM 724 Query: 783 LHTRMPFDPQNYQPG-------ERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV--P 833 P + + A++ L + K + E + Sbjct: 725 YKRGYPLSNVWWDAYNGYFEDTKESKVAKQVLSSLYYENKTKALHETTAKNLFGENIHAS 784 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILEGL------------SRYQI 880 + +++F++ + F Q L++ R D + + Sbjct: 785 VSRMEKFFSCEFQHFAQYGLKLEERAHFKLQAVDMGEIFHGAMEWISAELKRNNQDWGNL 844 Query: 881 NQQLLNAL--VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG 938 ++ + + + + + L ++ + Sbjct: 845 TEEECRQMAKLAMTFLAPKIQHEILLSSKRMEYIQYKLLQIITRATTVLNEQAKSSAFRP 904 Query: 939 QSMEIDLACNG--------------VQITGWLPQVQ---PDGLLRWRPSLLSVAQGMQLW 981 +E+D G + + G + ++ D R + Sbjct: 905 IGLEVDFGLKGDIPSLKIPLKSESELLLQGRIDRIDVAEQDDRTFLRIIDYKSSSHDLAL 964 Query: 982 LEHLVYCASGGNGESRLFLRKDGE 1005 E A + + + Sbjct: 965 TEVYYGLALQMLTYLDIVVTNAQK 988 >UniRef50_C7GAA1 ATP-dependent nuclease n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GAA1_9FIRM Length = 857 Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats. Identities = 125/946 (13%), Positives = 272/946 (28%), Gaps = 150/946 (15%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG--IAAN 59 L+ N + V ++ ++ + +I+V Q Q L ++ N Sbjct: 3 LQFIFGNSGSGKSDFLYDSVLKQAKENKEQQFLIIVPEQFTMQT-QRELVERQKQHAIMN 61 Query: 60 IDFPLPASFIWDMFVRVLP-EIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 +D A + +F + + K +L ++ E++ L L + Sbjct: 62 VDVLSFARLAYRVFDDLGKQNVVVLEETGKNL-------VLRKVAEQKKAEL--KVLGAN 112 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV-EGLGEAQAWQAPLWKALVEYTH 177 +K QY V RPD LA++ + EGL +++ EY Sbjct: 113 MNKMGYVGEVKSLISELMQYNV-RPDALAEFLEKEPLGEGLRLKMKDVLTMYQGFTEYLK 171 Query: 178 QLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFI-CGISALPPVYLQALQAL---GKH 233 + +E L L + V + + P+ + ++ L K Sbjct: 172 GRYITA-------EEVLELLYDVAEESELLRNSVIVLDEFTGFTPIQNRLMEKLLVLAKK 224 Query: 234 IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ 293 + + + D+++ Y + + S + L + Sbjct: 225 VSVSVTM---------DVREDFYQCRGVHELFAMSKKTVASLLKVAELCKVPVEE----- 270 Query: 294 DVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 PL+ GK R + D + Sbjct: 271 ----PLVLPTGKQRR----------YANAADLYFM----------------------EQN 294 Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA 413 + S + + I +P+ E++ ++ + + RDI V+ Sbjct: 295 LFRPGAGSYRYKAPEQSMQHIRITSLKNPREELKFAAREIVRL-TRENGYRYRDIAVVTG 353 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 D+ Y ++ +F ++PY I + HP +E ++L + + F E V Sbjct: 354 DVQQYGNYVPEIFEQY----HIPYFIDQTKNILFHPFIECIRAILEMIEYDFSYESVFRF 409 Query: 474 LDVPVLAA---------------------------RFDITEEGLRYLRQWVNESGIRWGI 506 L + + +TE+ + L +V GIR G Sbjct: 410 LRCGLASRVVTEAKNSDKEPDPAATEDLTQQPETGSHGLTEQEIDRLENYVLARGIR-GA 468 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 + + G L + + +++ P E+ +++ Sbjct: 469 SRWSRPWTFVMPDGTLEDMARLNEI--------REAVYENFKPLLEAFRGKD---NTVST 517 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 +L R L E+ L+E + I + ++ + Sbjct: 518 QTYELYSLIRRLDMEQLLKERGNFFEA------HGNQARAKEYDQIYKIVMDLLDKVTSL 571 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 + + + D L + ++ V + + R K++ +G+NDGV Sbjct: 572 LGDETMTIREYSDILDAGFEAAKVGIIPPGNDTVTVGDIERTRLNHVKILFFVGVNDGVV 631 Query: 686 PRQLAPLGFDLMSQKPK---------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 P+ G ++ K G R + ++ + ++LY+++ + Sbjct: 632 PKAGNQGGIISQFEREKMAEYHLELAPGAREKVFIQKFYLYLNMTKPSERLYVTFCRVN- 690 Query: 737 QDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR----------VKAHLTCLHTR 786 D S L+ L+ Q E + + + + Sbjct: 691 SDGKALRRSYLIGTLLKLFPQLAVEEPSEEETLEGALTAESALPFLMEGLTKPVEDEEAW 750 Query: 787 MPFDPQNYQPGERQSYAREWLPAA--SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHP 844 + + AA + A S+ V + + L++F A Sbjct: 751 TALLAWYLSDEGEREKVMQLFDAAFGAHKDDAISKAVTKALYGNTLENSVTRLEQFAACA 810 Query: 845 VRAFFQMRLQVNFRTEDS-EIPDTEPFILEGLSRYQINQQLLNALV 889 + L++ R D + L R+ + + + Sbjct: 811 FAHYLSYGLRLKERELQQFASVDMGNIYHDVLERFCKGHRAVGLYL 856 >UniRef50_B9E0C6 ATP-dependent helicase/deoxyribonuclease subunit B n=3 Tax=Clostridium RepID=ADDB_CLOK1 Length = 1150 Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 102/745 (13%), Positives = 222/745 (29%), Gaps = 97/745 (13%) Query: 311 IYLLSDLESSQELDAFVDV---TPDNLLHNIQSDILELEN------------RAVAGVNI 355 + L + + +D F+ + + L +++I+ + + A ++ Sbjct: 230 MDALGEYSERESIDLFLPIKITERNILQIAEKNNIIYQKPVNLRCSPCYRFKNSTALQHL 289 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 + S + + I + E++ + ++ D L +D+ V+ D+ Sbjct: 290 QHSLFSYPYKNYEKSTEDINIFKALNKYTEIDYIARDIVKA-CRDKNLRFKDMAVVTGDL 348 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 D Y I+AVF +PY I +R + ++ IS + + + E V L Sbjct: 349 DEYENLIKAVFNQYD----IPYFIDKKREIIHNQIVILIISAVEILAKNWSYESVFRYLK 404 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 +L F + + L +V +GIR G + + + Sbjct: 405 TGLLDLEF----DDIDILENYVLANGIR-GRQWLDTKPWSFKINYGNFKEDDSEE--EQE 457 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 + V + + +L + L +EE + R+ Sbjct: 458 YLNKINCIRDKVREPILKLSNDIKGKKKGRHICEELYNFLCELKIPEKVEELIIEFRNT- 516 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 + + I ++ + + + + + + L Q I Sbjct: 517 -----DRLDKANEYSQIWDIVVDVLDQIVDVLGEQSFGMEIFNEALEIGFSQYEIGVIPP 571 Query: 656 A-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK---------RGD 705 A V + + ++S + + G+NDG++P ++P G + + Sbjct: 572 ALDQVLVSNITRIKSYNISALYIAGVNDGIFPVTISPEGIFTDQDRDELKQNGLEIAPNT 631 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE 765 RSR ++++L L + L ++Y + + PSV++ + + Sbjct: 632 RSRAFEEQFLIYATLTIVDKYLTLTYSMSDE-EGKAKRPSVVISMIKKIFPKLQEKSNLL 690 Query: 766 ALNCDESE-ARVKAHLTCLHTRMPFDPQNY-QPGERQSYA---REWLPAASQAGKAHSEF 820 + E V + + + +N S W K Sbjct: 691 DASGYEGGIEAVNSPKVTFNMLISNIRRNLGHRENINSLWIDVYRWYREHEIWNKRLDTV 750 Query: 821 VQPLPFTLPETVP----------------LETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 + + + + L++F P F Q L+V R S Sbjct: 751 LGAFYYNNEIKISDLVKIRRLYGKHLNMSVSRLEKFAQCPFGYFVQYGLKVKDRKMYSLS 810 Query: 865 -PDTEPFILEGLSRYQIN------------QQLLNALVEQDDAERLFR--RFRAAGDLPY 909 PD F+ L R+ I ++ + L+ Y Sbjct: 811 APDLGSFMHGILERFSIGLKQKSLTWENVDERCCEENINDLVDNVLYDNPNSILNSSKKY 870 Query: 910 GAFGEIFWETQCQEMQQLADRVIACRQPGQSME-------------IDLACNG-VQITGW 955 + +T + + +A + R ++ E I+L V +TG Sbjct: 871 KHVTDKLKKTLTRSVWLIAQHMKKGRFIPRAYELVFGEIGDFPPISIELDSGEKVSLTGK 930 Query: 956 LPQVQ---PDGLLRWRPSLLSVAQG 977 + +V D + R Sbjct: 931 VDRVDTAKEDIITYIRIVDYKSGTR 955 >UniRef50_C9LAG6 ATP-dependent nuclease subunit B n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LAG6_RUMHA Length = 1144 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 110/1049 (10%), Positives = 263/1049 (25%), Gaps = 194/1049 (18%) Query: 17 MEFIVERERLDDPFEPEMILVQSTGMAQWLQM--TLSQKFGIAANIDFPLPASFIWDMFV 74 + + ++ +++P + +ILV Q + T+ + GI NID + + Sbjct: 18 LYNKIIQQSIENPKKQYLILVPEQFTMQTQKELVTMHPRKGIC-NIDVLSFERLAFRVLT 76 Query: 75 RVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF--------- 125 + L E +LR + + K+ Sbjct: 77 EMGESQRTL------------------LEETGKSMVLRRVAQEKKKELKILGAKMDKQGY 118 Query: 126 --QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPR 183 Q+ S ++L QY + D E L L++ +Y Sbjct: 119 VSQMKSMVSEL-RQYEISTEDLEDVLEDLSSSPELYYKLQDIKTLYQGFFDYLEGSFIT- 176 Query: 184 WHRANLYQRFIETLESATTCPPGLPSRV-FICGISALPPVYLQALQALGKHIEIHLLFTN 242 + ++ + L V + G + P Sbjct: 177 ------QEEVLDAMGRVAPQSKKLKDSVLVLDGYTGFTP--------------------- 209 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS 302 +LL E E+ ++ + + +AS Sbjct: 210 -------------IQLQLLETLLEICEEVYVTVTVAAGEDPYKMGSPHELFYLSRQTVAS 256 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 ++ +D + + + D +E+ Sbjct: 257 LLRIAKDKKISWKEYWIPEGRGEYQGRFKD----------------NPPMAFLEKNVFRY 300 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 ++ ++ + +P E+E+ + ++ RD V+ D+ Y Sbjct: 301 RRKKYPKQQDAVQIYEAQNPASEMEMTAGEIRRLV-RTKGYRYRDFAVITGDMQVY---- 355 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 A A +P I ++ + +P +E + + + F E + +L + Sbjct: 356 APAAARAFARYEIPCFIDEKHSVFLNPFVEYLRAAVDMIVENFSYESIFRMLRCGLN--- 412 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 DI+ E L +V GIR Sbjct: 413 -DISTEEADRLENYVIAMGIRGFSRWQQEWVRSYRG------------------------ 447 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQL-------NIWRRGLAQERPLEEWLPVCRDML 595 ++ + + A LV ++ + L Q + ++ Sbjct: 448 --ENPEECVQIDKIRASLVEKWEPFYKKMKTPDASVRTYTEALYQYITANKIQEKLKEFT 505 Query: 596 NAF-FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 F + + I + ++ + + V + ++ L L + ++ Sbjct: 506 RNFEAEGNLSLVKEYSQIYEIVMNLLDKLVEILGDKKVRIREFKEILEAGLSEAKVGIIP 565 Query: 655 L-AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK----------- 702 + V + + R K+V +G+N+G P++ + + Sbjct: 566 PTSDQVLVGDMERTRLKDIKIVFFVGVNEGKIPKEQQAGKLLSDLNREELKGSLKERGLS 625 Query: 703 --RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 + ++ L ++ R PS LV ++ + Sbjct: 626 LAPTAKENLYTQKFYLYLNLTKPSER-IYLSYSRLSSSGEAMSPSFLVAQIQKLFPDAVR 684 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG-ERQSYAREWLPAASQAGKAHS- 818 ES+ L+ + ++ + +E+ ++ A Sbjct: 685 EWDV--PLFAESKYGALDRLSEEMRKQDRTSPVFEELMSWFTSQKEYGELVNRLIDAAYY 742 Query: 819 -EFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI-PDTEP 869 + + + E + L++F F L + R D Sbjct: 743 VNPQESISKGVAEALYGTELSNSASRLEQFAKCACSHFLSYGLMLRERVRYEFSMADMGT 802 Query: 870 FILEGLSRYQ------------INQQLLNALVEQDDAERLFR--RFRAAGDLPYGAFGEI 915 + L + + + + L E E + + Sbjct: 803 LLHNSLDLFARKVREQGKSWVDLEDEERDTLAEDCVTEVVEKSGETILLSSARNAYTINR 862 Query: 916 FWETQCQEMQQLADRVIACRQPG-------------QSMEIDLACN-GVQITGWLPQVQP 961 + + L ++ S+ DL + + G + ++ Sbjct: 863 VKRMVKRSVWALQKQLKQGEFYPALTEWAFGEKDNIDSLNFDLESGQKLHLKGRIDRIDV 922 Query: 962 DG----LLRWRPSLLSVAQGMQLWLEHLV 986 L + ++ Sbjct: 923 CQDKENHLYVKVIDYKSGTTQLDLIKLYY 951 >UniRef50_C4G8W0 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G8W0_9FIRM Length = 1199 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 137/1037 (13%), Positives = 283/1037 (27%), Gaps = 131/1037 (12%) Query: 17 MEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-FGIAANIDFPLPASFIWDMFVR 75 + + R ++P +++V + +++ I N+D + +F Sbjct: 14 LFDQILRRAKEEPKRHFIVIVPEQFTMSTQRELVARSSQKIIMNVDVLSFNRLAYRVFEE 73 Query: 76 VLPEIPKE-SAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADL 134 ++ K + ++ ++ T+LR + ++ L ++ A Sbjct: 74 TGTKLDDVLEDTGKNLLLRRVAQE-----HEKELTVLRGNVRRPGYIDEIKSLLTEMA-- 126 Query: 135 FDQYLV---YRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQ 191 QY + D + G E + +++A E + Sbjct: 127 --QYGIGPKEFADLAELTDMGSSFRRKAEDLS---VIYRAFREAIEGRYITA-------E 174 Query: 192 RFIETLESATTCPPGLPSRVF-ICGISALPPVYLQALQ---ALGKHIEIHLLFTNPCRYY 247 +E L + V I G + P+ Q L L I + L Sbjct: 175 EVLERLAQLMDQSALIKDAVIAIDGFTGFTPIQKQVLAQMMRLASSIYVTLTM------- 227 Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG 307 D + + L + E E + EN + GNP AS L Sbjct: 228 --DPGERITGSHLDYELFAMTKEMGEGLVRLAGENRCPIEEPVCL--TGNPRFASAPMLA 283 Query: 308 RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 L + + Q+D + A + + + S + Sbjct: 284 YLEANLFRPKSRPYGKEL-SGLDGKETAGCSQAD---TKETASCAQSDAKENASRAQGES 339 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 DP I S + E+ + + + D RD ++ A++ Y+ + +F Sbjct: 340 DPKMRQIRLGRAASFRDELAFAGEEIRKKI-RDQGGRYRDFAIVCANLSDYADYAGQIF- 397 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 LPY + + HP++E +S LSL F E ++ L + I Sbjct: 398 ---DKMDLPYYLDQEQDILFHPLVEFILSSLSLFTEDFSEESLMQQLRSGL----AGIDP 450 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L ++++ IR G + ++ G QS+ Sbjct: 451 SDADLLERYIHARRIR-GFARYRRPFSGRVRNFSQEQMLRVEQLRKGIV-ADISDFRQSM 508 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + + A + + + E LE CR D + Sbjct: 509 CEENAVTRDRALA----------IYAYLQAHEVEEKLEARANACRA------EGDEIAAS 552 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMP 666 + + + + + + LS L L + + V I L Sbjct: 553 IHSRVFGLVMETLEKMSDLLGEEKMSLSDFAQLLEAGLRAISVGTVPPSFDSVVIGDLER 612 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK---------RGDRSRRDDDRYLFL 717 R K + +LG +D PR G +++ K GDR R R+ Sbjct: 613 TRLEHIKTLYVLGASDAAIPRSAESSGLFSQAEREKLREKQIDLAPGDRERAFMQRFYLY 672 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 AL ++L +SY S D S S L+ + + + Sbjct: 673 LALTKPSEQLVVSYARLS-SDGSALRESYLIGLICRLFPGLGVENLEGRADLQRLVTAPA 731 Query: 778 AHLTCLHTRMPFDPQN---------------YQPGERQSYAREWLPAASQAGKAHSEFVQ 822 A + + + + E L + + + + Sbjct: 732 ALDYLPDALRSLSEKEPSREEGQLACAIYEVLKEDKNFTDRAEELFKTAFSEQGQDRLSE 791 Query: 823 PLPFTLPETV---PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI-PDTEPFILEGLSRY 878 L + + + L++F + + L + E D + L + Sbjct: 792 RLIKRVSGDLIQGSVSRLEQFCRCAYAYYLRYGLLLQEEEEPEIDFLDMGNLHHQTLEFF 851 Query: 879 Q--INQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQE------------M 924 + ++ L+ D + E+ + + + Sbjct: 852 SKRMKERKLSWKEISDSDAEALLEEAFRNAVGQMERAELLENRRQAQVIRRMKSVLRCSI 911 Query: 925 QQLADRVIACRQPGQSMEIDL--------------ACNGVQITGWLPQVQPDGL---LRW 967 L ++V + E+ +Q++G + +V + Sbjct: 912 WALREQVTRGDFVPEEFEMSFGPRDQLSSMRFQLGEREKLQLSGKIDRVDCMRTPEGIYV 971 Query: 968 RPSLLSVAQGMQLWLEH 984 + Sbjct: 972 KVMDYKSGNQKLDLTRL 988 >UniRef50_B8DF43 ATP-dependent helicase/deoxyribonuclease subunit B n=16 Tax=Listeria monocytogenes RepID=ADDB_LISMH Length = 1157 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 81/740 (10%), Positives = 201/740 (27%), Gaps = 83/740 (11%) Query: 336 HNIQSDILELENRAVAGVNIEEFSRSDNKRPL---DPLDSSITFHVCHSPQREVEVLHDR 392 ++ + LEN+ ++ + + ++ H ++ + E+E + Sbjct: 262 TQVEENKFFLENKRAKTESLAFLANTWGHNKFMSFKNEPQNLKIHQANNRRAEIEGIARE 321 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 + ++ RDI ++ ++ Y + V + +P I +RA HP +E Sbjct: 322 IRQLVLN--GYRYRDIAILTRNLGDYDVLCETVMEAY----NIPTFIDKKRAMAKHPFIE 375 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPV---LAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 S L + E + + + + + L +V E+GI+ + Sbjct: 376 FIRSSLDAILFNWKYEPIFQAVKTEFFFDITEKSSLNRRKADILENYVLENGIQNKWKWE 435 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 + + + ++ + L + Sbjct: 436 KEGDWVYRKIRGLSTNVLPQTDEEIHMQSIINEMRSLIVNPLATLELNLRKAKTGMEFAL 495 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 L + + LE W + E A++ E + Sbjct: 496 ALYHYLEQVNAVERLESWRQRAEE------QGYLELAREHEQAWSSISALLDEFVEVLGE 549 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + + L + + LD S + V + + + + KV+ +GMNDGV P + Sbjct: 550 ETLDLDSFTEIIGTGLDALEFSLLPPSLDQVVLSDMENAKLLDMKVIFAIGMNDGVMPLR 609 Query: 689 LAPLGFDLMSQK---------PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 G + K ++ ++ L + + KL++SY + Sbjct: 610 QKDKGIFSDQDRDALRAEDSKLKPSAKNNIGEEDLLAYKIISLPSDKLFLSYPAADE-EG 668 Query: 740 SERFPSVLVQELID---------YIGQSHYLPGDEALNCDESEAR----VKAHLTCLHTR 786 S ++++ Y+ L E + S+ + + L Sbjct: 669 KVLSESNYLRKIKGQFNELNESVYLTDPSLLSDAEQSSYIRSKQATLGLLTSQLQMYKRG 728 Query: 787 MPFDP-------QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV--PLETL 837 ++ + A++ L + K ET+ + + Sbjct: 729 YTLSSVWWDAYNSYFENEKESIMAKQVLSSLYYENKTKPLQETTAKNLFGETIHASVSRM 788 Query: 838 QRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILEG------------LSRYQINQQL 884 ++F++ + + Q L++ R D L + ++ Sbjct: 789 EKFFSCEFQHYAQYGLKLEERGHFQLQAVDMGEIFHGAMEWISAELKRNNLDWGNLTEEE 848 Query: 885 LNAL--VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME 942 + + + + + L ++ + +E Sbjct: 849 CKQMAKLAMTFLAPKIQHEILLSSKRMEYIQYKLLQIITRATTVLNEQAKSSAFRPVGLE 908 Query: 943 IDLACNG--------------VQITGWLPQVQP---DGLLRWRPSLLSVAQGMQLWLEHL 985 +D G + + G + ++ D R + E Sbjct: 909 VDFGLKGDIPPLKIPLQSDSELLLQGRIDRIDMAEQDDRTFLRIIDYKSSSHDLALTEVY 968 Query: 986 VYCASGGNGESRLFLRKDGE 1005 A + + + Sbjct: 969 YGLALQMLTYLDIVVTNAQK 988 >UniRef50_D1BPP0 ATP-dependent nuclease subunit B-like protein n=3 Tax=Veillonella RepID=D1BPP0_VEIPT Length = 1185 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 114/775 (14%), Positives = 251/775 (32%), Gaps = 118/775 (15%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 R V E + + + D +I ++ +RE + + +LA +E RD Sbjct: 276 RGPQIVRELESNYFISPSKKNSTDETIPLIRGYNREREADAVARGILAYVESSEEARYRD 335 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 + +M+ + ++Y ++ VF +P+ I +R ++HP+ E +L + + Sbjct: 336 VCIMLRESETYGDTLEKVFTRY----GIPHFIDRQRPMKNHPLGELLTALFDIVRHNYSR 391 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI---RWGIDDDNVRELELPATGQHTW 524 + + LL ++ +T E + L +V E GI +W + + + Sbjct: 392 DSMFLLLKTDLMP----LTREAVDELENYVLEFGIDHYKWERESWPYLRGFYEGQDEESH 447 Query: 525 RFGLTRMLLGYAME---SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 R + A + W Y + A QL L Sbjct: 448 LDAPRRARVNKARQTIMDVLSPWFDFAAYSDGHTG--------AEWGAQLYGLLETLQVP 499 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 L EW+ +A + D E++A+ + + I E + + L + L Sbjct: 500 ERLYEWVK------DAETVGDQESKASHEQMYNAVLSFIDEISMVMKDEILTLDEMMLLL 553 Query: 642 AQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 + L S + V I T+ S + V ++G+N GV+P+ + G ++ Sbjct: 554 EEGLSDVNYSMIPPSLDHVVITTIERGYSQWWPKVFVMGLNQGVFPQSMGDEGLIKDKER 613 Query: 701 PKR---------GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 + G + ++ +L A+ A L +SY G S +D + PS++V+ L Sbjct: 614 QELANAGITLAEGALPKAFNENFLLYLAMTRASDSLTLSYAG-SGEDGTGLEPSLVVKRL 672 Query: 752 IDY----------IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQS 801 + + D +S + + L + +P + Sbjct: 673 ESLGYVDQTVEIPLSIAPDTEADYVWRPLQSLSLLSERWGALFSGYEVNPLWWGLYNWAR 732 Query: 802 YAREWLPAASQAGKAHS--EFVQPLPFTLPETV---------PLETLQRFWAHPVRAFFQ 850 + + ++ + V + L + + L+R+ P + + Q Sbjct: 733 ESETYRSRLAEVSRGIRDNNDVPVITQDLVNGLFLSKGYMSGSVTRLERYQQCPFKFYAQ 792 Query: 851 MRLQVNFRTEDSE-IPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFR----RFRAAG 905 L++ R S P+ F+ L R + LL + D + + R A Sbjct: 793 YGLKLEPRPVRSFGAPEIGTFLHANLER--LGNYLLENNKQWRDLDEEEQANLCRTVADE 850 Query: 906 DLPYGAFGEIFWETQCQEMQQ-------------------------LADRVIACRQPGQS 940 L GE + + ++Q ++ + Sbjct: 851 ILQENQLGEETSDAYQKAIEQRVQRTLHVTVDRLVEWSKRSDFDTKYLEQDFGRQGGWDP 910 Query: 941 MEIDLACNG-VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWL---------------EH 984 + + L + +++ G + ++ ++ + + Sbjct: 911 IRVPLGEDRYLRLIGQIDRIDEYTRGGQTYGMVIDYKSGGAHVTAQDVYYGLKLQLMTYL 970 Query: 985 LVYCASGGNGES---------RLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREG 1030 LV ++ G +++ P++ E A+ L+ + ++ Sbjct: 971 LVLESAYGKTHGGSMSPASVVYSYVKNPKIPADAPISYEDAVS-LANESDAWQNS 1024 >UniRef50_Q0AXV2 DNA helicase/exodeoxyribonuclease V, subunit B n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXV2_SYNWW Length = 1124 Score = 275 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 140/1035 (13%), Positives = 286/1035 (27%), Gaps = 194/1035 (18%) Query: 16 LMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLS--QKFGIAANIDFPLPASFIWDMF 73 L+ +E+ D + ++LV Q + +S + GI ++ ++F Sbjct: 17 LVYQEIEKALQSDKKQTLILLVPEQYTLQAERDVISQLRLPGI-MRLEVLSFTRLAQNVF 75 Query: 74 VRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF-------- 125 RV ++ L E+ +LR + + S + L+ Sbjct: 76 SRVGGLT-------------RVF-----LNEQGKNMVLRRIVDECSSELSLYKKAIRQEG 117 Query: 126 ---QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQP 182 Q+S AD F Q + RP+ L + + E + +++ Y Sbjct: 118 FINQISQLMAD-FKQRHI-RPEDLQLDAEEMPDQIIKEKLKDISIIYQHFNRYMEGRYID 175 Query: 183 RWHRANLYQRFIETLESATTCPPGLP-SRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 + +++ L L +RV+I G + P L+ ++ + Sbjct: 176 S-------EDYMDLLIEKLEHYTSLKNARVWIDGFTTFAPQTLKIIEKI----------- 217 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA 301 F + + D Q Sbjct: 218 -------------------------MVMARDTTICFTLDPDTWDIAELDLFQLP------ 246 Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 G+ R ++ +E+ VD P +L ++ ++E + Sbjct: 247 --GRSFRQIRAMVRKNALQEEI-IQVDPRPAEML------------KSPEINHLEAELFA 291 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 + +I + EVE +L +D+ V+ D+D Y Sbjct: 292 YPGKTFAKKPQNIELFAASNIYSEVEA--LAAEFLLLARQGYRWKDMAVVCHDLDRYGSL 349 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 I+ F +P + +R SHP++E ++ L + + EDV L Sbjct: 350 IRRTFRDY----GIPCFMDRKRDIMSHPIIELILAALEILSRGYRYEDVFTYLKTGFS-- 403 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 D+T + + L + E GI+ ++ + R+L +E Sbjct: 404 --DLTVDEVEILENYALEYGIKGNKWKEDFSY----GDAESLIELNQKRLLFTKPLEDLG 457 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 + + + L + LE+W Sbjct: 458 VMLKGN--------------NTIREMAQALFAFLERENIYSKLEKWTNDL------LARG 497 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVN 660 E + + + I+ + + V L + L I V Sbjct: 498 FLEEASESSQLWNAMIEILKQMVEIMGEQKVNLKEFKRILEAGFLSLEIKIIPTTVDQVL 557 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR---------RDD 711 + + +S K + ++G+NDG+ P G ++K ++ ++ Sbjct: 558 LGDIQRSKSHDIKCLYVIGVNDGILPSLGREEGILSETEKEALQEKGLDLGYEREMIWEE 617 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG---------QSHYLP 762 +R+L AL +++Y SY + PS+L+ +L + Sbjct: 618 ERFLIYSALAKPAERIYFSYALADE-EGRALRPSLLIDQLRMIFPSLSLKTNLLEDRQWQ 676 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL--PAASQAGKAHSEF 820 + S + L + + W G H Sbjct: 677 LQMVATPESSFKHLVEKLRLGLDGKELEDFWWDVYRWYFEQESWQCSRKLLLQGLFHQNQ 736 Query: 821 VQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSE-IPDTEPFIL 872 +P+ + + + L++F + P F + LQ R PD Sbjct: 737 PEPIEPQVSRRLFGTPLRSSVSRLEQFVSCPFAHFVRYGLQPQERKNYELNSPDLGLLFH 796 Query: 873 EGLSRYQINQQLLNALVEQDDAERLFR--------------RFRAAGDLPYGAFGEIFWE 918 + L + + N E + R Y Sbjct: 797 DSLLHFSHKLRENNRQWLDLSKEECYAIIDTVVDEIVPSFGRGIFNSHPRYQYLLNRLKR 856 Query: 919 TQCQEMQQLADRVIACRQPG-------------QSMEIDLACNG-VQITGWLPQVQ---P 961 + + L + + ++EIDL + + G + +V Sbjct: 857 ISRRAVWILTEHIQQGDFKPWDYEVAFGRGGMLPAVEIDLENGEKLILEGRIDRVDLLEF 916 Query: 962 DGLLRWRPSLLSVAQ 976 + R Q Sbjct: 917 EESCYVRILDYKSGQ 931 >UniRef50_A6TVN9 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Alkaliphilus RepID=ADDB_ALKMQ Length = 1149 Score = 275 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 94/691 (13%), Positives = 220/691 (31%), Gaps = 81/691 (11%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 + +IE + + +++ + E+E + +++ ++ + Sbjct: 278 PKEKEIAHIEREFNTYPYKQYADEIANLEIFAGSNLYSEMENVAAQIIHLV-RNRGYRWN 336 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 DI ++ +D YS ++ VF ++PY I ++R+ ++P++E +S + + + Sbjct: 337 DIALVSGGLDQYSMILKRVFEEY----HIPYFIDEKRSIMNNPMIELILSSIEILSRGYQ 392 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW-GIDDDNVRELELPATGQHTWR 525 EDV + L D+T++ + L +V + GIR + + E Q Sbjct: 393 YEDVFSFLKTGFS----DLTKDEVEQLENYVLQYGIRGKAYSEPFTKGFEKKQIQQKDKE 448 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 G ++ + + + + P+ + I + + L + + L E L Sbjct: 449 EGEKQIDEEKKEKYNELRMRFIAPFAKFEKRIYR-KKKIGEITKALFEFMKELNIEDKLN 507 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 +W+ R+ +F E T I + I + ++ L L Sbjct: 508 QWIEELRE--EKYF----EYVNENTQIWNKIMEIFDQLTEILADESATLKEYGRILEAGF 561 Query: 646 DQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR- 703 ++ V + ++ +S K + ++G+NDGV P G L ++ Sbjct: 562 LACKVGVIPSTIDQVLVGSIERSKSHDIKALFVVGVNDGVLPFGQEDGGILLDHERESLV 621 Query: 704 --------GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 S +++++ A + L++SY Q+ S+L+ Sbjct: 622 KKGISIGTTLESSLLEEQFMIYSAFSKPTEYLWVSYALAD-QEGKAMRQSILIDRFKKLF 680 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ----------NYQPGERQSYARE 805 ++ + D + D + ++ Q + + S Sbjct: 681 -KNLRIKSDVVNDVDRQLHLITTPISTFKYMTENIRQNVDDKAMADMWWDVYDWYSKEPT 739 Query: 806 W--LPAASQAGKAHSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVN 856 W G H + + +++ + L+RF P F L+ Sbjct: 740 WEDRRKLMVKGLFHQNQITYIGENKAKSLYDNPIKSSVSRLERFANCPFSHFVTYGLRPK 799 Query: 857 FRTEDSEI-PDTEPFILEGLSRYQ---INQQLLNALVEQDDAERLFRRFRAA-------- 904 R E PD + + ++ +N+++ + ++ + L + Sbjct: 800 ERKEYQLSNPDIGRLFHDSMEQFTKEMVNEEIQWKDLTKEKNDELVEKVIDEMVPDFEHG 859 Query: 905 ---GDLPYGAFGEIFWETQCQEMQQLADR-------------VIACRQPGQSMEIDLACN 948 Y + M L D + + I+LA Sbjct: 860 IMLSTHRYQYLVTRLKRISKRAMWTLTDHVKKGEFVPMGHEIIFGLEGDVPPIIIELANG 919 Query: 949 G-VQITGWLPQV----QPDGLLRWRPSLLSV 974 + + G + +V + + Sbjct: 920 EKIYLEGRIDRVDLLNDEEDGNYVKIIDYKS 950 Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/224 (12%), Positives = 65/224 (29%), Gaps = 23/224 (10%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGI--AANIDFPLPASFIWD 71 ++ ++ E + F +LV Q + L +K + + Sbjct: 19 LEEIKQKLQEEEDNKLF----LLVPEQFTLQ-AERDLIRKQELTGMMRAEVLSFTRLAHR 73 Query: 72 MFVRVLPEIPK-ESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSK 130 +F V + K + K+ ++ ++ + D KL +L + Sbjct: 74 VFSEVGGLTRVPINELGKNMILRKIADE-----SLKELSIYQSIAKQDGFITKLNELICE 128 Query: 131 AADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLY 190 Q+ + + + L L++ Y NL Sbjct: 129 M----KQHDITPTELTMELNEIEEETILKRKLEDITLLYQRFNNYLKGQYVDNEDHVNLL 184 Query: 191 QRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 IE +E ++I G + P ++ ++ L + + Sbjct: 185 IENIERVEFLEGAE------IWIDGFQSFTPQIIRVIEKLAQKV 222 >UniRef50_C0EV12 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EV12_9FIRM Length = 1134 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 153/1040 (14%), Positives = 298/1040 (28%), Gaps = 193/1040 (18%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQ---KFGIAANIDFPLPASFIW 70 + V R +++P + ++V + +Q + + + G NID + Sbjct: 15 TEYLVQEVIRLSMENPQQKYYVIVPEQF-SLEMQRKMVKKHPRHG-FFNIDVLSFHRLAY 72 Query: 71 DMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSK 130 +F P E +L L +LR L++ + F+ S K Sbjct: 73 RIFDEC-GYQPGE--------------ILEDL---GVSMMLRKILSEGENNFLYFKKSMK 114 Query: 131 AADLFDQYLVYRPDWL---AQWET-GHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWH- 185 A D+ +++ WE + E LGE KAL +LG+ H Sbjct: 115 KAGFIDELKSMLMEFIGYGVTWEQVEEVSEKLGEN--------KALSNKCKELGRIYEHF 166 Query: 186 ------RANLYQRFIETLESATTCPPGLPSRVFIC-GISALPPVYLQALQAL---GKHIE 235 R + ++ ++ P L + VF G + PV L L+ L I Sbjct: 167 DKAIEGRFMVTEQILDVAREFAKEAPMLTNAVFYFDGFAGFTPVQLAFLKELLKVAGQIN 226 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 + + P F + + Sbjct: 227 VTITI----------------------------------PEFVPGQRGMPEDLFTSSKKT 252 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 G+ LL +L + + TP + + A N+ Sbjct: 253 GDALL------------MLCQENMQEVEEVVKLDTPVS------PRFINNPELAFLEKNL 294 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 + SR + ++ I VCH+P E + + ++ ++ + RD V+ D+ Sbjct: 295 FQNSRKIYSKKIER----IHMTVCHNPDGEADYVMHKIEQLVRQ-KGYRYRDFAVLSGDV 349 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 Y+ + F A +P ++ H +EA SL L + E V L Sbjct: 350 ADYA----SAFKRKAAILNIPVFEDTKKKVSYHSGVEAVRSLFHLAQMEYSYESVFRYLK 405 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 + ++ +E YL +V +G+R L + + L +L Sbjct: 406 SGMS----NLIDEDADYLENYVLYAGVRGYSMWKKPFYRRLKNKDEAAIKALL--LLQEK 459 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 ME + + + + + L L+ E L+ + Sbjct: 460 FMEETENFCSVM----------RDKEASVRDKIEVLYHTMVKLSFEEKLKNQAQKAEEN- 508 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 + F A + +++ + + + + + L + + LD + L Sbjct: 509 SDFVK-----AAEYRQLYDLLLSLMDKIVMIFGEEKMAVKELAEIVDAGLDALGLGVVPL 563 Query: 656 A-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP---------KRGD 705 V + L R KV+ + GMNDG P + G +K + Sbjct: 564 TMDQVVLGDLKRTRLHEVKVLFITGMNDGKIPPNIEDRGLLSDEEKEVLKNCGISLSQSL 623 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE 765 + +D + A +LY SY D S PS+L + + + E Sbjct: 624 LEQSMEDEFYMYMAFAKPTDELYFSYSVTD-SDGSALRPSLLQKNISQLFPKLKRKQYPE 682 Query: 766 ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ--SYAREWLPAASQAGKAHSE---- 819 R A+ WL + + Sbjct: 683 EERRYYFNLEDSREFLIESFLQAKTEPEKVRKNRAFVMLAKYWLEQSEGRKELEKYGHWI 742 Query: 820 -----------FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DT 867 + + + + L+RF A P + F L++ R E P D Sbjct: 743 ENAYQEPELSEELLEQLYGKELSGSVTRLERFAACPYQYFCIYGLELREREEYKIRPIDL 802 Query: 868 EPFILEGLSRYQ----------------INQQLLNALVEQDDAERLFRRFRAAGDLPYGA 911 + L + + +Q ++ + E L F+++ Y Sbjct: 803 GNLFHKALECFSRKVKESEYSWKNIPDEVQEQYISEALHTAMDENLSDVFQSSSRNQYKI 862 Query: 912 FGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQITG--- 954 + + +Q L + + E+ + + G Sbjct: 863 --KTVERIMKRTIQVLRVHLKNSQFEPDRFELSFGKNKKLKEAEVPLEDGRKMFLQGVID 920 Query: 955 WLPQVQPDGLLRWRPSLLSV 974 + + D + + Sbjct: 921 RVDTCEDDDEILMKVIDYKS 940 >UniRef50_B1HN89 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Bacillaceae RepID=ADDB_LYSSC Length = 1169 Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 147/1080 (13%), Positives = 298/1080 (27%), Gaps = 168/1080 (15%) Query: 15 ALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID--FPLPASFIWDM 72 + ++ + L P I+V M+ + L+ + G+ I W + Sbjct: 20 QEIVEQLKSDPLGHPI---FIIVPDQ-MSYSTEYELTNRHGLQGLIRAQVMTFKRLAWLV 75 Query: 73 FVRVLPEIPKE-SAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKA 131 KE + + + + KL+ ++ +F+L R ++ L + Sbjct: 76 LQETGGIARKEVNGYGYRMLIRKLLEE-----QKSEFSLFRQAAGKRGFTEEIETLLKE- 129 Query: 132 ADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQ 191 F +Y V E+ ++ QA L+ L +LG Y Sbjct: 130 ---FSRYSVNSSVLAEVKESLKAIDAPNTLQAKTNDLYVVLQALEERLGTTYVDSEGYYP 186 Query: 192 RFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDI 251 E L+ A T ++I G +A L+ ++ L K + H+ P D Sbjct: 187 ILTEQLKYAETMKQA---TIYIDGFTAFTVRELELVRELLKVTK-HVTVVLP-----FDH 237 Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYI 311 D A+ + + Sbjct: 238 IDEAFDEQ------------------------------------------ALFHEAALTN 255 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 L D+ + + +D + + + E + ++ Sbjct: 256 QRLHDIANEEGIDVEPPLH-----------FYYTQRFQSEDLQHVEANFANMVPHTKKTS 304 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 + + + EV + + + + +DI+++ + Y P I ++F Sbjct: 305 GDVMVFEASNRRAEVHAIAREITKL-TREYGYRYQDIVLLYRQAELYDPLITSIFQQY-- 361 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD---ITEE 488 +P + ++ HP++E S L + S + E V + + I E Sbjct: 362 --EIPIFTNTKKTMLHHPLIELSRSALEIMTSNWKYEPVFRSVKTDLFFPLQAELTIWRE 419 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L + GI +G + + + + Sbjct: 420 RADRLENYCLAQGI-YGERWFEEPRWFYKKYRGLEFHSRVQTDEERAMQAEIEAIRDEIR 478 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 +S + + L L L+ DA + Sbjct: 479 QPLKSLQDKLSIASTGKDIATALFELVESLQVYEKLQAMKDR------ELERGDALAASE 532 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPM 667 +W ++ + + + + L + D S+ V + T+ Sbjct: 533 HEQAWNEWINVLDQFVYMFGEQEMSVEEAAKILDEGFDTLEFSRIPPTLDEVMVATVDLA 592 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK---------RGDRSRRDDDRYLFLE 718 R KV +LGMNDGVYP ++ G +++ +R + +LF Sbjct: 593 RLSNIKVAFVLGMNDGVYPTRMEYEGLLSDTEREWFSQIGYELAPTSSNRLLQENFLFYR 652 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 A + KLY++Y + S+ +++ I + L G +A + Sbjct: 653 AASTPSNKLYLTYPTADE-EGKALLSSLYIKKFIGNDKIAGLLSGVQAERVVMDPIELLD 711 Query: 779 H---LTCLHTRMPFDP---QNYQPGERQSYAREWLPAASQAGK---------------AH 817 H R Q Q + A EWL + H Sbjct: 712 ESALPYLRHPRTALAHLMVQLRQAEHSRELAPEWLALQKFYQQDPYWALIFDRVHYPITH 771 Query: 818 SEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEP 869 +PL + + + + +++++ P F L++ R E Sbjct: 772 KNEAEPLETYITQELYGQKLTSSVSRIEKYFRCPFSHFTTYGLRLEERAEYRLETFAMGD 831 Query: 870 FILEGL-------SRYQINQ-QLLNALVEQDDAERLFR------RFRAAGDLPYGAFGEI 915 E L R Q++ +L ++Q + + + Y Sbjct: 832 LFHEALKWITEETHRLQLSWIRLTKQQIKQLARQAVEQIVPVFSHQILLSSARYRYIQRK 891 Query: 916 FWETQCQEMQQLADRVIACRQPG---------------QSMEIDLACN-GVQITGWLPQV 959 + M L +EIDL + + G + ++ Sbjct: 892 LIRIVERTMMALTQHANVSHFKPIAIEASFGPGQHEQLPPLEIDLTSGKKMFMRGRIDRI 951 Query: 960 QP---DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQA 1016 D R + E VY + L + + + P E A Sbjct: 952 DSATIDDRSYLRIVDYKSSARDLDLNE--VYYGLSLQVLTYLDVAMENSTYWLPGETEPA 1009 >UniRef50_Q6A851 Exodeoxyribonuclease V gamma chain n=3 Tax=Propionibacterium acnes RepID=Q6A851_PROAC Length = 1049 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 142/792 (17%), Positives = 260/792 (32%), Gaps = 69/792 (8%) Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + + ++ H CH R+ EV+ D + A L + PTL PRDI+V+ + Sbjct: 277 AQSAVTHRKELPTVEIHQCHGVDRQAEVVRDVVCAALADYPTLEPRDIVVICCGRQDTAH 336 Query: 421 FIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + A + + + +PV EA ++L L SR +D+L+L +P + Sbjct: 337 LLSAGTLADIDHPAHQLRFTTPPQREHVNPVTEAVTTILGLASSRATGQDLLSLCAMPAV 396 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 RF +++ + + V+++ IRWG+D + L Q TW G+ RM+L AM S Sbjct: 397 QTRFGFSDDDQEAIERLVSQADIRWGVDPAARDKAGLGRIKQSTWLAGIERMILAIAMSS 456 Query: 540 AQGEWQS-VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 + V P + LVG LA + ++ P+ W +++ Sbjct: 457 TPPTYLGTVTPITDVGSTTIPLVGKLAEFVSRMRKAFLDTETPAPIATWKRRVSQIVDNL 516 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 A+ + + G + D L R + G Sbjct: 517 AAAPADAPRSALQTLALLTGL----EGVAEDREFDRQEIIDLLNWLSGIHRGRHSWFDGS 572 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 + +C + + +VV ++ P Q A L + + D + + L Sbjct: 573 IQVCRPGELTPVDHEVVIVVD------PDQEAVHADLLQGLRDENLDPAAKARQD-LLDV 625 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 AL SA+ L + RS N P + L + P Sbjct: 626 AL-SARTLLVVVRQARSPVSNLTVLPGPFTRTLSQALKAQSATPR--------------- 669 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQA-------GKAHSEFVQPLPFTLPET 831 H PF + +++ AA+ A + H + P+ Sbjct: 670 --CVKHGLQPFSADEFSHHSDTAWSGFDNTAAAAAGCHPGSQPRPHRVVLPPVAKLPESR 727 Query: 832 VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ 891 + L L +HP R + R +++P P L +Y I ++L L Sbjct: 728 MSLIDLTLALSHPARTLLRARAGAPANERSTDLPVDLPLAPSSLDKYWIRSRILADLEHG 787 Query: 892 DDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR--QPGQSMEIDLACNG 949 + R G P G G+ ++ Q+ R R Q Q +EID + Sbjct: 788 FLLDDAINAERLRGSTPPGHLGQHIVTKLAEDAMQICQRANRLRGDQDEQFIEIDFDLDE 847 Query: 950 -------------------VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYC-A 989 V + G + V+ ++ S + + LW++ L A Sbjct: 848 GNSPPLLWPDELIVDPMHPVHLHGRV-GVRNHQIVHAVASRANARPLLDLWVDLLAVTVA 906 Query: 990 SGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTC 1049 + G + + R A + A L+ L + + + A ++ Sbjct: 907 TDEPGWFGVLVPNGDVLRMASPAPDHARDILAGLARVAWWSNQQLIPLPVKLAHALVELS 966 Query: 1050 YDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQS 1109 A ND + + + + ++ N D E + E S Sbjct: 967 PMAHNDYRTGASALQVQ----WSREWDPNWAAFLGTDVGELIAC----CHELGTTLTELS 1018 Query: 1110 QRFLLPLFRFNQ 1121 + P+ + + Sbjct: 1019 EWLFDPIKQALR 1030 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 85/233 (36%), Gaps = 24/233 (10%) Query: 23 RERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPK 82 E DPF +++ ++ L +L+++ GIAA ID P + +L + Sbjct: 23 SEPTTDPFVRPILVAPGNAQSRSLLQSLARRHGIAAGIDTTTPLGLRERLEEDLLGVKRE 82 Query: 83 ESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK---RKLFQLSSKAADLFDQYL 139 + S++ ++ ++ F ++ +L + R + + +AAD Sbjct: 83 NDPWQPGSLALRICRVIEN--NSPGFEVVSAHLEASRRQGVPRATWTTARQAADAICALA 140 Query: 140 VYRPDWLAQWETGHLV-----------EGLGEAQAWQAPLWKALVEYTHQLGQPRWHRAN 188 D L W G + L A+AW APLW+ L+ + P + Sbjct: 141 RDSHDVLNAWADGATPTTHQGDTDLAGDPLDPARAWWAPLWRTLLAEPCHVPDP----VS 196 Query: 189 LYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 +Q ++ + + + P + + + +AL ++ ++ Sbjct: 197 RHQLLVDAILTQSRSEPP----IVWFSSTTTAQHDVSLAEALSASHDVTIVHL 245 >UniRef50_Q4L4Y2 ATP-dependent helicase/deoxyribonuclease subunit B n=65 Tax=Staphylococcus RepID=ADDB_STAHJ Length = 1162 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 113/919 (12%), Positives = 257/919 (27%), Gaps = 147/919 (15%) Query: 16 LMEFIVERERLDDPFEPEMILV-QSTGMAQWLQMTLS--QKFGIAANIDFPLPASFIWDM 72 M ++++ +DP ++L+ + Q L+ ++ + + + + Sbjct: 17 HMIDNIKQQMKEDPLGDPIVLIAPTQSTFQ-LEQAFVNDKELNGSLRTEVLHFERLSYRV 75 Query: 73 FVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAA 132 F V + + + + L+ Q L + + S K + Sbjct: 76 FQEVGGLTEER--LTQAATEMMIYDLVQQHKSE---------LKLYQSQVNYYGFSEKLS 124 Query: 133 DL---FDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANL 189 + F +Y V + L + +++ E + + Sbjct: 125 EQIQDFKKYSVTPEHLHTFLQDNDLKTRTRHKLEDISLIYQYFEERINGEFITSE---DS 181 Query: 190 YQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI-EIHLLFTNPCRYYW 248 FI+ L + V+I G + Q ++AL + ++ +L T Sbjct: 182 LNHFIDILSQSEWIKRA---EVYIDGFHNFSTLEYQIIKALVQSAKKVTVLLTTDGNE-- 236 Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR 308 DP L + + H E + + + N + Sbjct: 237 ----DPFSLFRKPSEVLTHLKEIAKDLNIELQQQFFKQQ-----YRFNN----------K 277 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 D I L ++ Q D + + L Sbjct: 278 DLIQLEQQFDALQINPIAYDGSINIL---------------------------------- 303 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 S + EV + +++ D +DI ++ D ++Y+ +V Sbjct: 304 ---------ESSSIREEVNEVARQIIKD-TRDKQYRYQDIAILYRD-EAYAYLFDSVLPQ 352 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 +P+ I +R+ HP++E SLL + + + ++ L+ +L F + Sbjct: 353 YD----IPFNIDTKRSMTHHPIMEMVRSLLEVIQTNWNISPMMRLIKTNILTNHFKDSAY 408 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL---TRMLLGYAMESAQGEWQ 545 + L +V E G+ D T L R + Sbjct: 409 LIDLLENFVVERGVYGKRWLDEKLFSIDNFTKMGRKEHKLTTEEREDFEQVVHLKNDIID 468 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 +L ++++ ++ + L E Sbjct: 469 KILTFEKAMNE----AENVRGFATAFYETMEAFDLPKYLMTHRDQLD------VDGRHEE 518 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTL 664 + I I+ + + + + L + L+Q V+I T+ Sbjct: 519 AEEIDQIWNGLIQILDDLVTVFDNEEMTLKRFLEVFDIGLEQLEFVMIPQTLDQVSIGTM 578 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD----------DDRY 714 + K + ++GMNDG P+ ++ +K +++ + D+ + Sbjct: 579 DLAKVDNKKHIYMVGMNDGAMPQPVSSSSLITDEEKKVFEQQAQVELSPTSDILQMDEAF 638 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI-------------GQSHYL 761 + A+ +++ SY Q ++ S + ++ Q L Sbjct: 639 VCYIAMTRGSEQVTFSYSLMGAQ-GEDKEKSPFIDQIQGLFNGLEVMNIHYQHNAQPLSL 697 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQN---YQPGERQSYAREWLPAASQAGKAHS 818 +KA L + + + L A + + Sbjct: 698 MEHPHQTKVVLFESLKAWLEAEMVADVWVDAYQVMRDNDKLNNGLEYLLTALTYDNETVK 757 Query: 819 EFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS 876 T+ + + + P + + L++N RT+ LE Sbjct: 758 LDEPLAASLYGSTINASVSRFEGYNDCPFKHYANHGLRLNERTKYK---------LENFD 808 Query: 877 RYQINQQLLNALVEQDDAE 895 I L + ++ D + Sbjct: 809 LGNIFHTALKYISDKVDGD 827 >UniRef50_Q057F6 Exodeoxyribonuclease V, g chain n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q057F6_BUCCC Length = 1042 Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 148/785 (18%), Positives = 354/785 (45%), Gaps = 35/785 (4%) Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 L +++DIL ++ + ++K+ ++ D+SI+ + C S EV+++++ + Sbjct: 282 LSYLKNDIL-----------KKKIYKINSKKKININDNSISINQCKSYIHEVQIVNNYIH 330 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 LE + + DI++ ++ID Y P+IQ +F + ++ L + + + +L Sbjct: 331 KTLETNKKIKLDDILITASNIDIYIPYIQKIF-NFSQNKNLLIKKTGKEEEKKKEILLTI 389 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 LL++ ++ F +L+LL++ +L +F I ++ L + ++ I +G + + +E Sbjct: 390 KDLLNIKNNYFKPFWILSLLNIKILRKKFSIKNRDIKTLGKLISHLNIAFGFNKKHYKEF 449 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 +P ++W + + R+ G+ + + ++ Y+ S+ L+G+ + + QLN Sbjct: 450 SIPDLKTYSWEYAIKRITSGFIFNNKNTIYNNIYTYNISNDKKNILLGNFINFIKQLNKL 509 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 R+ + +++ +E+W+ + ++ FF + + + L++ W+ I G+ + + + Sbjct: 510 RKKIYKKKKIEKWINIISIIIKNFFYIEKKDKKFFFLLKNIWKKNIFYGIKINFLKKISI 569 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 +E + +FL+G + + L + IPFKV+C+LG Sbjct: 570 EFFINEFFKNHSLLYKKNQFLSGNIKLINLNKINLIPFKVICILGCTQEKISLFNNQDIL 629 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 +L+ +K K + +FL+ + ++ L++SYI + N +PS + ++I Y Sbjct: 630 NLIEKKNKNNEN--------IFLKTIFLTKKYLFLSYIKNNYIQNK-YYPSKFILDIIFY 680 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG 814 I + Y + + + + + + + + + Sbjct: 681 IKNNFYYFKKKEKKKIQKKNFLNKIYKKNKNNIINSLFSKEKKKIIKTKKNQKKYKKINI 740 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRT-EDSEIPDTEPFILE 873 + FW +P+ FF+ L+VN + E++ + E F ++ Sbjct: 741 TIQKKIKIKKLIN------------FWKNPIEYFFKNTLKVNIKNYEENMFIEDEYFSIK 788 Query: 874 GLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA 933 L++Y+IN +L ++ + + F+ LP +I W + +++ L++++ Sbjct: 789 PLNKYKINSLILKNMLLNKKTDYHIKEFQLKNKLPQEKIAKILWYEKIKKINILSNQIKK 848 Query: 934 CRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN 993 R+ +++ I ++G + +V L++W + + + W++H++YCA Sbjct: 849 IRKFPKNIHIYYKFKKYYLSGKIKEVNKLNLIQWNVNKIKFKDIITTWIQHIIYCAFEKP 908 Query: 994 GESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQ 1053 +S L + + F + + A YL + I+G+ +G P+ ++ SG WL T + + Sbjct: 909 KKSILLSTNNKKIEFLSIKKKIAKKYLKKYIQGFIDGHKKPI-LILNSGIHWLHTIFLKK 967 Query: 1054 NDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFL 1113 + + + L A+ FL+ + G+ GE +I+ +++ L ++ I + ++ Sbjct: 968 ENVLKINKYNLNLAKKNFLKIWNGSNFFLGEKKNIFIKKIIPILNKNLIKKICNSCKYWI 1027 Query: 1114 LPLFR 1118 LP+F+ Sbjct: 1028 LPIFK 1032 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 81/179 (45%), Gaps = 9/179 (5%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML++Y SN+++ L + + ++ E+ L+++ + +WL++ ++ K I NI Sbjct: 1 MLKIYQSNKINFLLKKICKKIYIKKKKKILINEIFLIENKYVQKWLELYIANKKKINFNI 60 Query: 61 DFPLPASFI-WDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 F L F+ + + K F K+ + W ++ ++ + + L+ Y Sbjct: 61 KFILLFRFLNNFFKKNNIKKNKKLIIFEKKYLQWIIILIIYNTYD---CSFLKKY----G 113 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQW-ETGHLVEGLGEAQAWQAPLWKALVEYTH 177 + K F+ S A++F QY+ ++P + +W + + WQ LW +++ Sbjct: 114 IQYKNFEFCSHIANIFIQYIYFQPHLIYEWENNKKSKKKEKKTYQWQKKLWNLIIKKIK 172 >UniRef50_A5ZAT7 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZAT7_9FIRM Length = 1144 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 119/1015 (11%), Positives = 292/1015 (28%), Gaps = 143/1015 (14%) Query: 9 RLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGI-AANIDFPLPAS 67 + L + + R + + +V + + L+ + NI+ Sbjct: 14 KSHYLYEKLIEKSLKYRNKN----FIAIVPEQFSMETQKQILTMHPNRGSFNIEVTSMTR 69 Query: 68 FIWDMFV-RVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQ 126 + +F + E K + K+M Q ++ + + ++K K Sbjct: 70 LAYTVFEEQGFNEYKVMDDLGKTLIMRKVME---QCKDKLTIYKSKTSMPGFAEKMK--- 123 Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGL-GEAQAWQAPLWKALVEYTHQLGQPRWH 185 F QY + D L + + L + A EY + Sbjct: 124 ---TIVSEFKQYGIT-DDVLNNMKAECDSKPLLRHKLNDVEIISDAFNEYIKEKVITTED 179 Query: 186 RANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIE-IHLLFTNPC 244 ++ ++I + + + +I G + P+ Q L+ L KH + + T P Sbjct: 180 VLTIFCKYISSSDFIKN------TYFYIDGFTGFTPIQYQVLELLIKHCAGVKIAITLPE 233 Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWG 304 + + N+ + ++ N Sbjct: 234 DEF-----------------------------QSLRNAYSKGNNAISKYELFN------- 257 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS--DILELENRAVAGVNIEEFSRSD 362 L +D ++ L D+ + + + ++ Q+ I + + N+ + S Sbjct: 258 -LSKDTLWKLKDIINRNNI----EQQETVIVGEGQAPYRIRDNKELTFLEKNLFRNNSSK 312 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 + ++ H +P+ E + R+ ++ D DI V+ D+D Y +I Sbjct: 313 YR----ENCKALEVHSMSNPREEAAYVAGRISELIV-DKGYRYNDIAVITGDMDGYYRYI 367 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 + F +P I + S+P ++ + + + + F E V L+ + L Sbjct: 368 EEEFS----KNNIPAFIDHKHNIASNPFVDGIKAAIEIVEKDFSYETVFHLIRLGFLP-- 421 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 I E + + +V +SG R G W M Q Sbjct: 422 --IDREAVDIMENYVLQSG-RRGFKSYGRL-----------WEKAYKGMTAEELDMVNQA 467 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 + V + + + + + + +R ++++ ++ + Sbjct: 468 REKLVEIIRPLREELKKKKATVREYTKAVYQFVQANNMQRQIDDYRIEFQN------QGE 521 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNI 661 + ++ + + + + + L + ++ V + Sbjct: 522 ISRAKEYEQVYVTIITLLDRIVELMGDEVLTIKEYKQILQAGFESVKVGIIPPGLDTVMV 581 Query: 662 CTLMPMRSIPFK-VVCLLGMNDGVYPRQLAPLGFDLMSQKP---------KRGDRSRRDD 711 + R K ++ +G+NDG+ P+ G + + Sbjct: 582 GDIERTRLKDTKRIIFFMGVNDGIIPKAGQAGGIITDTDREFLEKNNYILAPTATDNVFK 641 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 ++ +K+ I++ +S D + R S ++ L++ + DE+ Sbjct: 642 QKFYLYTIFAKPTEKMCITFS-KSGSDGATRRKSYIISTLMNLFENLKIIDEDESEITLN 700 Query: 772 SEARVKAHL------TCLHTRMPFDPQNYQPGERQSYAREWLPAASQA-GKAHSEFVQPL 824 L +++ + +E+ + A P+ Sbjct: 701 QVTTRSKALDYLSQNIYEYSKEGDSGIFKELMATVMKNKEYSKVINLMFDGAFYSAKNPI 760 Query: 825 PFT--------LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILEGL 875 E + + L+RF A F L++ R + D + Sbjct: 761 LDENVARQLYGNKENIGITRLERFAACAYSQFLNNGLKLGERKKFELAAFDIGNLYHSAI 820 Query: 876 SRY-------QINQQLLN----ALVEQDDAERLFRRFRAAGDLPYGA---FGEIFWETQC 921 + I L+ + D E++ ++ + +T Sbjct: 821 KEFFDTINTNNIKWADLDDKKSENIINDSIEKVMEQYENDALNDIARSAFIKKQVKDTST 880 Query: 922 QEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 + + L + + + E+ +A V + + + + Sbjct: 881 ETVNALVKHIRSGNFLPREYELRIAHGRV---DRVDTFEDGNNIYVKVIDYKSGN 932 >UniRef50_C4FTG6 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FTG6_9FIRM Length = 1178 Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 143/1048 (13%), Positives = 284/1048 (27%), Gaps = 176/1048 (16%) Query: 12 VLEALMEFIVERERLDDPFEPEMILVQST---GMAQWLQMTLSQKFGI--AANIDFP--L 64 VL + I +E F LV M +L + K+G AA +D Sbjct: 16 VLLDHLLDIQAKEPEAQFF----YLVPEHLKFDMESYLLAAVQDKYGSNEAALVDIQVVS 71 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 W + L E S+ + + +L+ + L + K Sbjct: 72 FKRLAWFLMPNSLAEEKPISSIGQIMLIKRLL------------ARYQDQLQVFRGQVKH 119 Query: 125 FQLSSKAADLFDQ-YLVY-RPDWLAQW--ETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + K A LFD+ YL +P+ L+Q + L E A L++ ++ Sbjct: 120 QGFAEKLAQLFDELYLGQIQPENLSQVPDLNQQEAKRLAEL----ALLYQGFIQEIEGQV 175 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 +H +++ P P+ + + LQ L L + Sbjct: 176 LGHYHDLQRLDSYLKA------HPLNRPTYLVVDHHYFFNGQQLQLLTTLIQQ------- 222 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 C+ W S+ A + D +V Sbjct: 223 ---CQAVW--------------------------ITLPLSQQAARSKAYDPLIEVA---- 249 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 R + L S L D T + + Q++IL L + + Sbjct: 250 -------RHTYGQMQLLAQSLHLPVAEDWTINQVQEGYQANILTLAQAFENHLRLAPQEL 302 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 S + + Q EV +++ ++ + RDI+V+ D+D Y P Sbjct: 303 SQPLNQVKTH----VIWEHDAIQTEVRHTSNKIHQLVSQ-EGYRYRDILVLTRDMDRYRP 357 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV-- 478 + A+F +PY HP++ S L L R+ D+ +L + Sbjct: 358 LVTALFEQND----IPYFYDHAVIMGQHPLVLWLESGLKLYRYRYQLADIFGILKSGLWL 413 Query: 479 ---LAARFDITEEG-----------LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 L A + + L V +G E + Sbjct: 414 PADLRAAMAENPQDGPVLEEEFKAQVDLLENVVLANGYVGYRFAQLSFEWRFDQADRPYV 473 Query: 525 RFGLTRMLLGY---AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 Y + PY + + L + A L W + + Sbjct: 474 NAAGQVTGQTYGQVVQALRESFLADFAPYQDLAQLTSFSGQKAAEW---LYQWLEEVGVK 530 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 L + D + Q A + E + S ++ L Sbjct: 531 DRLIARRDQAIE------KGDLALSRQYEQVWQTLTASLDEFYQLYGEAELTFSEFQELL 584 Query: 642 AQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 L++ A V + ++ + +KV +LG ++ P+ ++ + Sbjct: 585 LTGLNEATFHIIPPALDQVMVTSMESPQVQAYKVCFVLGADELTLPKHHQEDSLLSVANR 644 Query: 701 PKRGDRSRRDDDRY----LFLEA--------LISAQQKLYISYIGRSIQDNSERFPSVLV 748 G+ L+SA +LY+SY+ ++ S + Sbjct: 645 QSLGESLLPYQQLRQSSQHNYSLELLMTQQVLLSASDRLYLSYVA--MKGQQTVKLSPYL 702 Query: 749 QELIDYIG---QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 Q+L +++ S + + + + Q +R S A Sbjct: 703 QQLAKQFHLPIKTYTHTLIHQNQVKLSRLEFGRYPVQMSSLLQLVHHYSQQKDRPSAAFL 762 Query: 806 WLPAASQAGKAHSEF-----------VQPLPFTLPETV-------PLETLQRFWAHPVRA 847 + H+ Q L + + L++++ P Sbjct: 763 DFLTLMASQNPHTWVLLAQLFQFNQLPQNLTPETALALFGQKMTASVSKLEQYYQDPYSH 822 Query: 848 FFQMRLQVNFRTEDSEIPD-TEPFILEGLSRYQINQQLLNALVEQ-DDAERLFRRFRAAG 905 F L++ R + + + L ++ Q+ + L Sbjct: 823 FLLYGLKIRPRQQLELNAAGAGDYYHDFLDKFTQAQEARPDFETNFASIQTLMAEDLRFN 882 Query: 906 DLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC----------------NG 949 + Q ++Q + +A Q + Sbjct: 883 IFGTNPRMHLIKRKLDQHLRQFLNVSLAQSQALTVQPVATELVFGSKQEAGLILPLDKGS 942 Query: 950 VQITGWLPQVQPD-GLLRWRPSLLSVAQ 976 + + G + ++ D ++ + Sbjct: 943 LTLRGKIDRIDADPSQNYYQVVDYKSGK 970 >UniRef50_B1YKM7 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Exiguobacterium RepID=ADDB_EXIS2 Length = 1143 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 145/1041 (13%), Positives = 287/1041 (27%), Gaps = 192/1041 (18%) Query: 16 LMEFIVERERLDDPFEPEM-ILVQSTGMAQWLQMTLSQKFGIAANID--FPLPASFIWDM 72 + V + + P P + +V M+ ++ ++ ++ + F + M Sbjct: 16 QLIERVIDQLTEQPLGPSIYFIVPDQ-MSFEMERRIATDPRLSGLVRMEVMSLRRFAFHM 74 Query: 73 FVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF------- 125 ++P L E LLR + + ++ K+F Sbjct: 75 IRDYGN------------------QVIPFLDETGTQLLLRQVVEEAEEELKIFKRTKNMP 116 Query: 126 ----QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 L A F + LV PD L Q A +++ E Sbjct: 117 GFYKGLDELIAS-FKRSLVN-PDMLRQIS--GASPERSPKLNDLALIYERFTERISD--- 169 Query: 182 PRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 H + + IE L A VF+ G Q L Sbjct: 170 KALHADDYFTTLIELLPKADLSDV----SVFVDGFYEFSLQEQQVL-------------- 211 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA 301 +L+ + ++ + Sbjct: 212 ----------------LRLMELTKDMHLSFTLDVEDVYTK------------------QS 237 Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 +G R Y+ L+ ++ Q DI + + ++ Sbjct: 238 EFGVSQRCYMQLIEQMKERQIAH---------------EDIYYGQTVKFQSTGLRMLEQA 282 Query: 362 DNKRPLDPLDS---SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 P D +T + Q E E + + ++ +DI +V ++ Y Sbjct: 283 LLSPGYPPTDEEVTGVTVSAAVNRQVETEAAVRKAIQLV-RHDGYRFKDIAFLVRHLEPY 341 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 + ++ F +PY + R + HP++E ++L + + + E V LL + Sbjct: 342 ADHLERAFQLYD----IPYFLDQRESMVHHPIVELVHAVLEIVMTGYREESVFRLLKTEL 397 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 + + L L +V E GI+ G +L+ + + E Sbjct: 398 IPLPAEDPRLALDRLETFVLERGIK-GSMWKKPWQLKRRLADEISLTDAEL-QEELELNE 455 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 Q +++ P + ++ L + L W A Sbjct: 456 WRQFLVEAIEPL----EKRFKASKTMSEYTRALYRFLEEHHMTDRLTVWKQ------QAL 505 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-G 657 + + + + + + A + L + L+ R S + Sbjct: 506 EVNELSQAREHDQVYEAVLLLFEQLEAAAPEATLTTELFVQMVETGLESLRFSLVPPSLD 565 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR---------SR 708 V + R KVV LLG NDG+ P D+ Sbjct: 566 QVIATDYVRGRLQQVKVVFLLGANDGLIPLVEDQSKLLSEGDHDFLHDQGIPVGKASLDV 625 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID----------YIGQS 758 DD+ Y + + + + L+ISY D P+ +V+++ Y ++ Sbjct: 626 FDDELYYLYQGVTAPSESLHISYALVDE-DGKALQPASIVKQIKHQLLQDRPVKTYFAEA 684 Query: 759 HYLPGDEALNCDESEARVKAH----LTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG 814 D+ L S R A L L R P P + R + Sbjct: 685 GDHAPDDQLQFVTSPERAAAAAAIELRRLQRRYPIQPSWFDVYNRLLENGRGRERMALFS 744 Query: 815 KA--HSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDS-EI 864 A + +PLP L + + + + A + F + L++ R E Sbjct: 745 NALFYQNQAEPLPEDLARNLYGDTIKASVSRFETYNACSYKHFARYGLRLKERKLYKFEA 804 Query: 865 PDTEPFILEGLS-----------RYQINQQLLNALVEQDDAERL---FRRFRAAGDLPYG 910 PD L+ R++ + + ++ E++ + +G Sbjct: 805 PDIGNLFHGALNDLSMNIKASGKRWRELDDQSCSNLAKEAVEKVTPEIQNAILMSSNRFG 864 Query: 911 AFGEIFWETQCQEMQQLADRVIACRQPG------------QSMEIDLACN-GVQITGWLP 957 + + Q + L + + L ++ TG + Sbjct: 865 YIKKKLTDVVEQTAKMLVKQAERSEFEPDLFEISFGNAMFPPLRFTLPDGTEIEFTGRID 924 Query: 958 QVQP---DGLLRWRPSLLSVA 975 +V L R + Sbjct: 925 RVDQATIGDQLYVRIVDYKSS 945 >UniRef50_A7VJ44 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VJ44_9CLOT Length = 1128 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 116/1019 (11%), Positives = 265/1019 (26%), Gaps = 160/1019 (15%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF--GIAANIDFPLPASFIWD 71 + + + + +P ++V + Q L G NID + Sbjct: 15 SRQIYNEIIQASIKEPERNFYLIVPEQYTME-AQRELVTMHPAGGMMNIDAIGMNRLAYR 73 Query: 72 MFVRV-LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD--DSDKRKLFQLS 128 +F + + F K + K++ +++ + Y D+ K Sbjct: 74 VFDELGISTGQVLEDFGKSMLIKKIL-----CEQQDTLQVYGSYYDKLGFVDEMK----- 123 Query: 129 SKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRAN 188 S +++F QY + + E + +++ + + R Sbjct: 124 SMMSEIF-QYNIKQDTIDEIMEQISEDSVVAGKMQDIRHIYEEFEAFAGE-------RYI 175 Query: 189 LYQRFIETL-ESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYY 247 + ++ +E L S ++ G + PV L+ ++ L + Sbjct: 176 VAEQLVELLTRHVGQSKLVCGSSLYFDGFTGFTPVQLELVEKLMTCAD------------ 223 Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG 307 + D +Q + L Sbjct: 224 ---------------------------------DLTFSFTLDDRDQKYEHIKDYELFYLT 250 Query: 308 RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 + I L++ ++ ++ +P L I + E N+ K+PL Sbjct: 251 KTTIKKLTEAAAAAGVEI---ESPVVLPGTINYRLGENRELFFLERNLFRSPYQKWKQPL 307 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + I Q E+ + + ++ + +DI ++ D++ ++ Sbjct: 308 ER----IHLTATGDAQDEIVFVASTIRRLV-REKGYRYKDIAIVAGDLEQ----ASHIYE 358 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + +P I +++P E S+L++ F + V L + F Sbjct: 359 RVMDEYEIPVFIDANACLKANPCAETIRSVLAVLADDFSYDSVFRFLKAGMTDLSF---- 414 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 E + L + + G+R W ++ + + + Q+ Sbjct: 415 EDIELLENYALKRGVRG----------------YSRWNRAVSENYEKTSPVNIEEIRQAF 458 Query: 548 LP-YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 + + + + A+ + L + + LE + Sbjct: 459 MKMFGDIRKVFADKKAVTKDYVEALYDFLLQIHMYEKLEARKNELYE------ENRINEG 512 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLM 665 A I ++ + + + + + + L + V I + Sbjct: 513 DAYGQIFEKTVRLFDKIAELLGDTKMSVKEFYEIVDTGLSDIEVGVVPPTVDRVLIGDIT 572 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK---------PKRGDRSRRDDDRYLF 716 R KV+ +NDG+ P+ + D+ +++ Sbjct: 573 RSRLNHIKVLFFTSVNDGIVPKAPKKGRILSDRDRDILSDCGLELAPSDKQNSYIEQFYI 632 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR- 775 L LYISY S PS L+ + D A ++ R Sbjct: 633 YTILTKPSDYLYISYHKLSASL-ESMRPSYLLGRISSIFPSLQAEEYDAASCMPDTVNRS 691 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSYAREWL-----PAASQAGKAHSEFVQPLPFTLPE 830 ++ L + + + +A E + L + Sbjct: 692 LRRILRAEDSEDAESRILTRILTEKGFAGELTAIYKGRTYRNVAEQLPPETIALLYGRYL 751 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS---------EIPDTEPFILEGLSRYQIN 881 + L+ + F + L++ R E + + Sbjct: 752 HASVSKLELYARCGFAYFLKYGLRLKEREMYQVDVRNVGVILHSVMEGLFKQVRDTRNND 811 Query: 882 QQLLNALVEQDDAERLFRRFRAA--GDLPYGAFGEIFWETQCQEMQQ-----LADRVIAC 934 + L R GD + + M Q L + Sbjct: 812 WENFPEDERMLMVTELVNRAAEESAGDFFEDNARNAYMLQMIERMAQTSAGMLQKHIRLG 871 Query: 935 RQPGQSMEIDLACNG---------------VQITGWLPQVQ---PDGLLRWRPSLLSVA 975 +E + I G + +V DG + + + Sbjct: 872 SMKPGMLEKTFDSAKDEVGSYLFELPNQIQMSINGKIDRVDVEEEDGTVYIKVIDYKSS 930 >UniRef50_C9LQY6 Putative ATP-dependent nuclease subunit B n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQY6_9FIRM Length = 1028 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 123/914 (13%), Positives = 256/914 (28%), Gaps = 150/914 (16%) Query: 127 LSSKAADLFDQYLVY--RPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRW 184 + +LF Q ++ L LG A + L+K +Y H Sbjct: 9 FAENLMNLFHQLDMFCISETALHDASLAEEGTPLGRKLADLSLLYKNYHDYLHT------ 62 Query: 185 HRANLYQRFIETLESATTCPPGLPS-RVFICGISALPPVYLQALQALGKHIEIHLLFTNP 243 R + + L L R++I G + + P ++ + AL E Sbjct: 63 -RFSYEGSLFDLLAGEIPKSEILRRSRIWIDGFNGMTPQKIRIVSALIHTAEEVTFTL-- 119 Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASW 303 +A + +++ N Sbjct: 120 -----------------------------------PLPDAKEGLSNEIFARPAN------ 138 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 LLS+ E + L + L A Sbjct: 139 ------LYALLSEKEPHFD--------SVTLPEMKRFRCPRLRCLAADYFQNVPSPCPLP 184 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 K + I E + + R+L+++ D L RDI+V++ D+Y+ ++ Sbjct: 185 KETSPVPEKGIHIVSAPDSHAEADFISRRILSLV-RDKNLRWRDILVLLRSADTYTDPLE 243 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP-------DSRFVSEDVLALLDV 476 F +P +++ +HP++ LL + F E + +L Sbjct: 244 RSFSRY----GIPVFTDEKQPMNNHPLVMLLDGLLHFIKAESRGKNRGFTREHIFRILKT 299 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 + + + L +V + IR+ + + Q + Sbjct: 300 EIFP---SFPTDMIDKLENYVLKYHIRFSTWQKPWAFRDYRSIDQEPAPLSDKEITKQNT 356 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 + + + S+L + A + L W L W Sbjct: 357 ANTWREKVLSLLNPFLAGWKEALSAEDKCAF---LYRWLTEQQIPETLSVW--------- 404 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 + + + ++ +++ E + D +P L L L S Sbjct: 405 DELEFEKTKKRPHLQVWKKVLSLLDEIVHVTGKDILPEEELCGILTDGLSALTFSMIPPT 464 Query: 657 -GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR------ 709 V + ++ + KVV + G +G +P+++ GF ++K +R Sbjct: 465 LDHVTVTSMDRGYAAEAKVVFIPGALEGSFPKKIDDSGFFTETEKQVLLKSARINLGNNL 524 Query: 710 ----DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL---------IDYIG 756 ++++ AL A LY+SY + S PS L++ L ++ + Sbjct: 525 MELVQEEQFYTYLALTRASDALYLSYPAAAADG-SAAEPSFLLERLKALGYYTENMEILP 583 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 S Y + + P + L + AG Sbjct: 584 PSPYHDDPSFFANPNQALSLLPEILRNGRPSPTGNWAALKDWAEGNEYRELMESKLAGLR 643 Query: 817 HSEFVQPLPFTLPETV---------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI-PD 866 + LP L + + LQ + + P + F + + + R D Sbjct: 644 YQNTAARLPKMLARKLFMKGGRFYGSVTKLQNYRSCPYQYFLRYGIGIEERNTGEADYLD 703 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDAERL--------------FRRFRAAGDLPYGAF 912 ++ G+ ++ + N Q E + + + D Sbjct: 704 YGNYLHAGIHQFGEILKSQNRQWRQATDEEIEKISEDITEKITPRIKADALSSDQSAKYT 763 Query: 913 GEIFWETQCQEMQQLADRVIACRQPGQSMEIDL-------ACNGVQITGWLPQVQPDGL- 964 + +T + +Q+ ME + + +TG + +V DG Sbjct: 764 RRVLDQTFRRALQRFRQWSRQSGFDTLDMEKEFYLRISASPTDSFTLTGKIDRVDTDGRY 823 Query: 965 ---LRWRPSLLSVA 975 ++ ++ Sbjct: 824 AAVCDYKTGSPKLS 837 >UniRef50_C9KJP7 ATP-dependent nuclease subunit B n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJP7_9FIRM Length = 1210 Score = 258 bits (660), Expect = 8e-67, Method: Composition-based stats. Identities = 122/950 (12%), Positives = 261/950 (27%), Gaps = 148/950 (15%) Query: 63 PLPASFIWDMFVRVLPEIPKES------AFNKQSMSWKLMTL-----LPQLLEREDFTLL 111 LP + + + IPK F + + ++ +P++ E LL Sbjct: 40 LLPEHMTFKVERELAASIPKGQGFLRSYVFGFRRFARHVLLETGHMKVPRISEVGRRLLL 99 Query: 112 RHYLTDDSDKR---------KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQ 162 R L ++ + + +D+ ++ YR E + Sbjct: 100 RKILVHHQKEKDLQVFARAVRQRGFTESLSDVIQEFKSYR--LTTDVLREAADELAKGNE 157 Query: 163 AWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLP-SRVFICGISALPP 221 L + + T + +AN + + L A P + + V++ G P Sbjct: 158 RLAGKL-QEMALLTDEFAAEMQGKANDAEDMMNQLAEAIPEAPLIKGAEVWLDGFIFFNP 216 Query: 222 VYLQALQAL-GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 + L+AL ++H+ R Sbjct: 217 QEMAVLRALIMTAAKVHVALP---------------------------MTGLAEGDGRVR 249 Query: 281 ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV---TPDNLLHN 337 + + + L + ++ R+ + + + P ++LH Sbjct: 250 LDLPENLQETALFNRPYRTLQAIRRMAREEL----AYRGPMPIHLLAEQHRFAPQSILHG 305 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 ++ ++ A + + + + EVE +L ++ Sbjct: 306 MEQELFRYGGSAQ------------------SEEQGVQLVEAANRRLEVESAAADILRLV 347 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 D R+I ++V D ++Y ++ VF +P+ +R HP+ E S Sbjct: 348 -RDEGWHYREIGLLVRDGEAYGDLVRLVFEDY----GIPFFEDAKRPSIHHPLAELMRSA 402 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 + + + E V L E + L +V E GIR + Sbjct: 403 IEVVARDWRYETVFRCLRTGFFPPVR----EDIDRLENYVLEFGIRGRKRWQQQEPWDWH 458 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 + QSV + + L + Sbjct: 459 RRYSLDDGEQVDEDTASTLALIDSLRRQSVEALSALED-ALRAADDVRGYTLALYDFLVQ 517 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 L L+EW V A + A+ + + + + LS Sbjct: 518 LEVPARLQEWAEVAER------EGRLADAAEHRQLWDDSMALFDQLVEVSGTEKMTLSDY 571 Query: 638 RDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 L+ LD +IS V + + + + +LG + PR++ G Sbjct: 572 EAVLSDGLDALQISLIPPGLDYVTLASFDQNSLDNMRGLYILGADAATMPRRVREQGIFS 631 Query: 697 MSQKPKRGD------RSRRDD-------------DRYLFLEALISAQQKLYISYIGRSIQ 737 + + + + ++ +++L A+ L+ISY Sbjct: 632 DADRLHIAETLAAFQKEGEEEHTISRGGHEKSFGEKFLLYRGFTEARDYLWISYALADA- 690 Query: 738 DNSERFPSVLVQELIDYIGQSHYLPGDEAL----------NCDESEARVKAHLTCLHTRM 787 + + PS LV+++ + ++ +L + + + L Sbjct: 691 EGNGLQPSPLVKKMRELFPKAAFLSIPLETVRRDDDLLLAAPRPALSGLANALRGEREHQ 750 Query: 788 PFDPQNYQPGERQSYAREWLPAAS--QAGKAHSEFVQPLPFTLPETV---------PLET 836 P +EW AG +P L E + + Sbjct: 751 AMQPCWRDVYNWAMGQKEWQRPLQLALAGLFARSGAGRIPKELAEQIFAKGTVLRGSVTQ 810 Query: 837 LQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER 896 ++F P F L++ R E + Q+ +L + Sbjct: 811 FEKFRQCPFAHFAAYGLKLQERREYQF---------RSMDLGQLLHAVLKEYGSIVKRD- 860 Query: 897 LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLA 946 D+P + E +L ++ R + ++ + Sbjct: 861 ---YANRWQDVPEEKRAALCEELVNTLAPRLQSEILLSRDNYRHLKKRIE 907 >UniRef50_C4Z483 Putative uncharacterized protein n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z483_EUBE2 Length = 1109 Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 120/1015 (11%), Positives = 290/1015 (28%), Gaps = 186/1015 (18%) Query: 17 MEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF---GIAANIDFPLPASFIWDMF 73 + + E + +P +++V +Q L GI NID + +F Sbjct: 18 LYTHIIDESMKNPDRNYIVVVPEQYTMA-IQKRLVSMHPRKGIL-NIDVVSFERLAYKVF 75 Query: 74 VRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQ------- 126 V + L L + +++ L + D+ K F Sbjct: 76 EEVGEDN------------------LEVLDDTGKNLIIKRVLEQNKDRLKYFGSNLSNTG 117 Query: 127 LSSKAADLFDQYLVY--RPDWL-----AQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 S+ + + L Y +PD + A + L ++ A EY + Sbjct: 118 FVSEMKSVISEMLQYDIKPDVMQDAAGAAYSDSEGSAALQYKLDDIVLVYNAFAEYIDKN 177 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFIC-GISALPPVYLQALQALGKHIEIHL 238 + + ++ L S T + + + G + PV + L Sbjct: 178 YITK-------EEILDKLCSKVTESERIKNCEIVFDGFTGFTPVQYNLMTILLSMCP--- 227 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 + Y D + + + Sbjct: 228 ------KIYVSLTIDASERENSVRGREE-------------------------------- 249 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR---AVAGVNI 355 + +D + L + + + V ++ I+ + +R + + Sbjct: 250 ----LFFMSKDCVSKLYKICDEEHVKVLEPVYIAGKAVPGKNVIVNVNSRFKNSEELDFL 305 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 E+ +N + +I + + E+ ++ + +I ++ AD+ Sbjct: 306 EQNLFRNNSGRFNQKTDNIVIYEGAVAKEELTFAAGEIIRLTRLC-GYRYNEIAIVTADM 364 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 D Y + +PY + +R +P + A L + ++ + + +L L Sbjct: 365 DGYGKLAANI----LKQNDIPYFLDYKRHVTDNPFIAAINGALGIIENNYSYDSILGFLR 420 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 + + E + L + GIR + T +T L + Sbjct: 421 TGMS----GMEREDIDLLDNYCVAVGIRGRGKWHEPWIRKFRGTVNNTDLEKLNSLR--T 474 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 + + VL ES+ +A ++ L + E+ + Sbjct: 475 MITDMLDPLEEVLKSKESN---------VADMVKALYEFLVR-------EDMEQKVSVLN 518 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 ++ + D + ++ ++ + + V + LA + +I Sbjct: 519 DSEYTGD-----EYVQLYKKVIEVLDKMYALLGSEKVGIKEFNKILASGFQEIKIGLIPQ 573 Query: 656 A-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD--------- 705 V I + R KV+ +G+NDG P++ S + D Sbjct: 574 TNDCVVIGDIERTRLDNIKVMFFVGINDGNVPKKADSRSVLSESDREYLEDKGIVMSASV 633 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE 765 R + R+ + + +KLY+SY ++ + + PS +++ + L + Sbjct: 634 REKAFTQRFYLYLIMTKSAEKLYMSYAVKN-SEGAALMPSYIIRSMRKMFSHCLKLSYKD 692 Query: 766 ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 + +P ++ E + E + + G+ Sbjct: 693 TAQQNSYVT------------IPQAANSFDNTEIAANVDEDIIDSLTGGRLVG------- 733 Query: 826 FTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR-------- 877 + + + F P+R + + + + R E + P +L + R Sbjct: 734 -------SVTSFENFAECPLRYYLRYGVDLKEREEFTFSPVNFGVVLHAVIREVCDEIKK 786 Query: 878 -----YQINQQLLNALVEQDDAE--RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR 930 Y I+ + +V++ A +++ + + + + + ++ Sbjct: 787 NGESYYLISDEKRREMVKRSVAAITDIYQNSILKDSSRNSFMIKRMEDLADRTVWAMGEQ 846 Query: 931 VIACRQPGQSMEIDL-----ACNGVQI----TGWLPQVQPDGLLRWRPSLLSVAQ 976 + E + Q+ + + + R + Sbjct: 847 LKCGDFVPFVFEHKFNMEVGDGDRKQLMSGTIDRVDICENGTDVYVRIIDYKTGK 901 >UniRef50_C4V2E4 ATP-dependent deoxyribonuclease subunit B n=2 Tax=Selenomonas RepID=C4V2E4_9FIRM Length = 1198 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 145/980 (14%), Positives = 248/980 (25%), Gaps = 151/980 (15%) Query: 99 LPQLLEREDFTLLRHYLTDDSDKRKLFQ-----------LSSKAADLFDQYLVYRPDWLA 147 LP++ + LL+ L S + +FQ L A+L R + Sbjct: 87 LPRISDIGRRILLKDILLQHSRELSVFQRSVHKRGFTEVLGHTIAEL------KRDRLSS 140 Query: 148 QWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGL 207 GE A L L +L R + +E L + P L Sbjct: 141 DHLRQAADVSTGEHARLSAKL-TELATIMDELAARMEGRLTDHTDRMERLAAQLIDAPFL 199 Query: 208 -PSRVFICGISALPPVYLQALQALGKHIE-IHLLFTNPCRYYWGDIKDPAYLAKLLTRQR 265 + +++ G P L +AL + ++ +H+ T Sbjct: 200 RGAELWVDGFDFFNPQELAVFRALFRVVDTVHVSLT------------------------ 235 Query: 266 RHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDA 325 +D EN + L + ++ + S E+ Sbjct: 236 MDGRDDGTHVFTNLPENIYDTGLFARSYQTMHLL-----------QQIFTEEQPSAEIGI 284 Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQRE 385 + G+ + E + D SI +P+ E Sbjct: 285 RLMPVQ--------------HRARTEGLRLLEAQLFGHGHITPAKDDSIRIVEAANPRLE 330 Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 VE +L + D R+I V+V D+D Y + F +P+ + +R Sbjct: 331 VETAAADILRL-ARDNGYRYREIAVLVRDVDLYGDLLSLAFAD----CGIPFYLDVKRPS 385 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG-----------LRYLR 494 HP+ E ++ + + E V L +E + L Sbjct: 386 AHHPLAELLRAVAQMTWRGWAYETVFRALRTGFFPLLGTEEDEDAPPLCADWQEAVDRLE 445 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES-AQGEWQSVLPYDES 553 + GIR + L E + + Sbjct: 446 NYCLAYGIRSESQWTATEPWDFVQRRVTEHELHLDEEEERLREEQWLDHLRRRIAEPLSL 505 Query: 554 SGLIAELVGHLASL-LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 A + L + L + L W AA I Sbjct: 506 LTGHLRRHESTARVRTKALYDFLDELCVPQTLRLWSETADR------EGRLADAAAHRQI 559 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIP 671 A+ + + + D + + L+ LD I+ V + + Sbjct: 560 WSSCMALFDQLVEVRGDDPLSSRDYEELLSDGLDAMSIALIPPGLDHVTVASFDQNSIAG 619 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR-----------------SRRDDDRY 714 + V ++G N G+ PR G ++ G+ + +RY Sbjct: 620 ARAVFVIGANAGIMPRAGTTSGVFSDTELLFIGESLQTAGADSGHTVFGGRTQQSFLERY 679 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD---- 770 A+ L++SY S D S PS L+ L +P A D Sbjct: 680 QLYRGFTEARDYLWVSYALSS-VDGSTLAPSPLIARLRRISSSFFSIPLALAGRDDPLLL 738 Query: 771 ----ESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQA--GKAHSEFVQPL 824 + + + A L R P + G + Sbjct: 739 SAPYPAFSHLTAALREKKERGEMPAMWGDVYNWMLQDAVMQPLLRRMLHGLFLPPREVSI 798 Query: 825 PFTLPETV---------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILEG 874 P + + L+ F P R F L++ R D + Sbjct: 799 PAPVAARLFTRDRRLSGSTTRLETFRQCPFRHFAMYGLRLQQRDRYEFQSNDFGTLLHGI 858 Query: 875 LSRYQIN-------QQLLNALVEQDDAERLFRRFR-------AAGDLPYGAFGEIFWETQ 920 L Y + E L + Y E T Sbjct: 859 LRGYGEWVRSAYGNDWCAALAEAPEKIEELLQELIPQVHSTVLMSRASYRHRIERIRCTA 918 Query: 921 CQEMQQLADRVIACRQPGQSMEIDL--ACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGM 978 Q +Q L A EI +GV++ DG+ + M Sbjct: 919 QQTIQHLTSWAAASSFHPYGFEISFGRRNDGVRL---ADFPLADGMTLSLRGQIDRLDVM 975 Query: 979 QLWLEHLVYCASGGNGESRL 998 +LV G L Sbjct: 976 DHHAYYLVLDYKTGATSLLL 995 >UniRef50_Q8CRT9 ATP-dependent DNA helicase pcrA n=245 Tax=cellular organisms RepID=PCRA_STAES Length = 729 Score = 253 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 78/639 (12%), Positives = 182/639 (28%), Gaps = 115/639 (17%) Query: 195 ETLESATTCPPGLPSRVFICGISAL-----PPVYLQALQALGKHIEIH-LLFTNPCRYYW 248 + L+S R+FI IS L P A + + H + + Y Sbjct: 123 DVLKSENIDSKRFEPRMFIGAISNLKNELKTPE-----DAQKEANDFHSQMVATVYKGYQ 177 Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN------PLLAS 302 + L + +R +N Q + D QD LLA+ Sbjct: 178 RQLSRNEALDFDDLIMTTINLFERVPETLEYYQNKFQYIHVDEYQDTNKAQYTLVKLLAN 237 Query: 303 ---------------WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL---E 344 +G G D +LS F + P+ ++ + Sbjct: 238 KFKNLCVVGDSDQSIYGWRGADIQNILS----------FEEDYPEAKTIFLEQNYRSTKN 287 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 + N A + + + I ++ + + E E + ++ + Sbjct: 288 ILNAANEVIKHNSERKPKGLWTANSGGDKIQYYEAMTERDEAEYVVKEIMK--HQRSGKK 345 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 ++ ++ V +PY + + ++ +S L + + Sbjct: 346 YSEMAILYRTNAQ-----SRVLEETFMKSNIPYTMVGGQKFYDRKEIKDLLSYLRVIANS 400 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + +++VP + I + ++ + ++ I Sbjct: 401 NDDISLQRIINVP----KRGIGPSSVEKIQTYALQNNI---------------------- 434 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 + ++ D L + + + L +E+ Sbjct: 435 -----------------SMFDALAEVDFIG-----LSKKVTQECISFYEMIQNLIKEQEF 472 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG-LGAQYGDAVPLSL--LRDEL 641 E + ++L D + + + + Y + PL L + L Sbjct: 473 LEISEIVDEVLQKSGYRDMLDREQSIESRSRLENLDEFMSVPKDYEENTPLEEQSLINFL 532 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 I + V + T+ + + F +V ++GM + ++P A Sbjct: 533 TDLSLVADIDEADTQNGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKS-------- 584 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSH 759 D +++R + A+ A++ LYI+ + + PS ++E+ + + SH Sbjct: 585 --EDDHEMEEERRICYVAITRAEELLYITNATTRMLFGRSQSNMPSRFLKEIPEDLLDSH 642 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE 798 + ++ R + T + + Sbjct: 643 TGQKRQTISPKSQPKRGFSKRTTSTKKQVSSSDWKVGDK 681 >UniRef50_C9LTM7 ATP-dependent nuclease subunit B n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LTM7_9FIRM Length = 1151 Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 129/970 (13%), Positives = 255/970 (26%), Gaps = 151/970 (15%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMF 73 + M ++ + + ++L+ + + L+ A Sbjct: 25 LSSMAERMKAKPMGSAL---VLLLPEHATYR-AERRLAAMMAGAGEGFVRGLVFGFKRFA 80 Query: 74 VRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAAD 133 VL E +A S+ +L LL ++L E + L + K + Sbjct: 81 RHVLQETGGAAAARITSVGKRL--LLKRILAEEGES-----LQAFARAAKQRGFTQTLER 133 Query: 134 LFDQYLVYR--PDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQ 191 ++ Y D L Q + + L A A ++ + R N Sbjct: 134 AMEEMRSYGIDGDALLQAQPALADDDLCRKLADLALIYSR-------YREKMAGRYNDTG 186 Query: 192 RFIETLESATTCPPGL-PSRVFICGISALPPVYLQALQALGKHI-EIHLLFTNPCRYYWG 249 ++ L L + V++ G S P + L AL + +H+ T Sbjct: 187 DMLDALAEKIPSSRLLEGAEVWVDGFSFFNPQERKILAALFQKAKNVHITLT-------F 239 Query: 250 DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD 309 D D A + + S Sbjct: 240 DPTDEAAMQRE----------------------------------------GSLFYRQAQ 259 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 + L L ++ V + QSD L R Sbjct: 260 TLQQLRRLAQEMQIPVRVRSLEE--RRRFQSDALAAIERTAFSF----------PLVPQA 307 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + + + + E+E ++ + + L RDI ++ D +Y + Sbjct: 308 GAAGVALVEAATRRLEMEAAAADIVRL-CREKGLRWRDIAILTRDEAAYGDMLALTLED- 365 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY ++R HP+ E S + + + + L Sbjct: 366 ---CGIPYFRDNKREGVHHPLAELVRSAFEVLRG-WRYDAMFRALKTGFFKKTRG----Q 417 Query: 490 LRYLRQWVNESGIRWG-----IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 + L +V E GIR D R L + + R+ Sbjct: 418 IDLLENYVLEFGIRGSSWTMEEDWHWHRRRSLDEEEEGATQKEAERLC------QINSCR 471 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 ++V + + + L L + LE W Sbjct: 472 RAVAEPLQEFAAQVKAASTVRGYAEALYRLLLALDVPQTLERWADEAEK------AGRLA 525 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICT 663 I +++ + + + + D L LD +IS V + Sbjct: 526 ESREHRQIWDDVISLLEQMAETSGDETIKVREFEDVLGDGLDALQISLIPPGLDYVTVAD 585 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR---------GDRSRRDDDRY 714 + + +LG N+GV PR+ G + + G ++R+ Sbjct: 586 FDQNSVENARAIYILGANEGVMPRRSQEKGLLSDADRLHLKEAGLELPQGSVEGSFNERF 645 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG-------QSHYLPGDEAL 767 L + A+ L++SY + P+ L+ ++ + Sbjct: 646 LLYKGFTEARDYLWVSYALADT-EGKALLPASLLGQIRTVLPAVSLQTVPLEGAERRLFA 704 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE-----------WLPAASQAGKA 816 ++ + A L + DP R+ A+ Sbjct: 705 GGRQAVTALAAALRSYREKGTLDPFWCDVYNWALGERKMSIVLQKVLQGIFSHAAAELLP 764 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS 876 + + F A P + F + L + R L Sbjct: 765 KELAAALYTKNRRLRGSVTRFESFRACPFQHFARYGLHLAERPAHGF---------RTLD 815 Query: 877 RYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ 936 + L ERL + R D+ GEI E +L + ++ + Sbjct: 816 LGVLLHAALREF-----GERLKKDGRRWRDVGEEECGEILHEILGLLAPRLQNEILLSSK 870 Query: 937 PGQSMEIDLA 946 +++ + + Sbjct: 871 QYENLLVRIE 880 >UniRef50_A8SJB4 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SJB4_9FIRM Length = 1152 Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 94/723 (13%), Positives = 229/723 (31%), Gaps = 85/723 (11%) Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 + +E+ S + + +I + EV + + + +++ DI Sbjct: 281 SEDLSFLEKNIGSFSPKVYFKDSENIRILKFKNIYDEVSFIAEEISKLVKI-KGYRYNDI 339 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 + + +D YS I+ VF + Y + ++ + +P++ +S+L + D + + Sbjct: 340 TLCMRSLDEYSYIIERVFDDY----NIDYFLDEKISIMENPIIILILSILDMKDKNYSYD 395 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 V L + +++E + L +V +GI+ D + H+ Sbjct: 396 SVFRYLKSGLT----GVSDEDIFLLENYVIANGIKGNRWFDESWNKSI----VHSVEEES 447 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 L E + E + + + L + + + + Sbjct: 448 DDEKLVKINEIKNIVISPIKNLHE----KLKGRNTVKDICKYLYEFTLEIGLFDRINNLV 503 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 ++ N + + + + A++ E + + + S + + L+ Sbjct: 504 MNFQNEGNLY------KAKEYSQVWGSFTAVLDEMVEFMGEEKIAYSKFINLIKTELENI 557 Query: 649 RISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR---- 703 + + V I T+ M+ K+ +LG+NDG +P+ + ++K Sbjct: 558 ELGIVPPSKDEVFITTVDRMKKPSTKIAFVLGVNDGNFPKNIVDNDLISENEKESLKTMG 617 Query: 704 -----GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL------- 751 + + D+++L + A++KLYI++ S + S V+++ Sbjct: 618 FNFSNNNLLKTTDEQFLSYKTFSIAKEKLYITFP-ISDLEGKSLLVSRFVKKIKFIFENL 676 Query: 752 ----IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT--RMPFDPQNYQP-------GE 798 IDY+ + E + + + +++ L++ D N++ + Sbjct: 677 EVESIDYLKDFSIMDIFETFSKERLYQILVSNIEALNSNKLSENDKFNFREIIDFLIEDK 736 Query: 799 RQSYAREWLPAASQAGKAHSEFVQPLPFTLPE-TVPLETLQRFWAHPVRAFFQMRLQVNF 857 Y E L K F V + L+ F P F L+ Sbjct: 737 DYKYKIEILKDKLNYKKETENIKDYTSFLYESGNVSISKLENFMRCPFSYFINYGLRAKE 796 Query: 858 RTEDSEIP-DTEPFILEGLSRY-------QINQQLLNALVEQDDAERLFRRFRAAGDL-- 907 R P D + + + I+ +++ Q + E+L ++ + Sbjct: 797 REVYDFSPADYGTYCHKIFDDFFKGIFENNIDWNIIDREFIQREVEKLTKKMAEKSNFIL 856 Query: 908 ----PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN-------------GV 950 Y F I + + ++ +A++V E + + Sbjct: 857 ESSPKYKYFSTITQKNIVESIEIMAEQVRRGNFVPTGFETEFGDESIKPITYTLKNGKEI 916 Query: 951 QITGWLPQVQP---DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWR 1007 ++ G + ++ + R ++ + L + E Sbjct: 917 KLVGKIDRIDVFKGENFDFLRIIDYKSSKRDIDLNQVYAGLQLQLFVYMNAILSSNKERY 976 Query: 1008 FPP 1010 P Sbjct: 977 KPA 979 >UniRef50_Q9K2F1 Exodeoxyribonuclease V, gamma subunit, putative n=7 Tax=Chlamydophila RepID=Q9K2F1_CHLPN Length = 1024 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 171/1131 (15%), Positives = 354/1131 (31%), Gaps = 212/1131 (18%) Query: 6 HSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLP 65 SN L A + + PF ILV + W++ L D Sbjct: 11 FSNSPRHLLAQLAEDITSTH-QKPFTKRWILVANATTGHWIKNQLVHVLS-----DHIFM 64 Query: 66 ASFIWDMFVRVLPEIPKESAFN----KQSMSWKLM--TLLPQLLEREDFTLLRHYLTDDS 119 S I+ ++ + S + ++ L+ +L ++ + F R +L+ + Sbjct: 65 GSTIFTASDSIVKHLFLGSGCSQPNIPDYLTLPLLINNILEEISKASKFENGREFLSPPT 124 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 ++ + K A F Q+ + A +Q L++ L Sbjct: 125 -----YETTKKLAAAFKQFHTF------------SQRPTKNASHYQ-ELFQIL------- 159 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 H ++ + F L + T + I G + LP + L + ++ Sbjct: 160 ---ESHFSSYEEMFTTILNNRTQEEDC---SLHIFGYAHLPKHLAEFFINLSTYFPVYFY 213 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 +PCR Y+GD+ + + ++ A L Sbjct: 214 CFSPCREYFGDLLSDRAIDFFWNQLPDSPIKNAWEHYVLSDRQA---------------L 258 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 LA+ + D E + + F+ D+ L IQ+ IL+L+ + Sbjct: 259 LANLAHKSQSSQNFFLDREIDYQ-EMFLPSKHDSSLGVIQNSILDLKPTSPQD------- 310 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 +I + + REV+ + ++ +L ++P +I ++ + I+SY Sbjct: 311 -------FSQTKQTICIYRALNIPREVQEVFCKVTELLHR--GVSPEEIFILSSHIESYK 361 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + A+F + ++P +D ++ + + L S+ ++ +L LL P L Sbjct: 362 VHLNAIF-----NPHVPIYFTDEVDPRAEDLRNKILLLSSILQTQGDLHYILQLLTHPQL 416 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + + + WG R G M++ Sbjct: 417 QQ-----PIDQNKVPYLIKKLSSEWGKISSKDRA-------------------SGQQMKA 452 Query: 540 AQGEWQSVLPYDESSGL--IAELVGHLASLLMQLNIWRRGL--AQERPLEEWLPVCRDML 595 P+ + G E+ L+ + + + E+ L Sbjct: 453 LGDLILEEYPFHQEGGRVSQVEVWETTVPLIYFIQERINLYLSSSQHSYEDLFQNVFSCL 512 Query: 596 NAFFLPDAETEAAMTLIEQ-QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 F+ E + +T + + + L L + S + Sbjct: 513 EKIFVLSPEETSFITTLRNSLFPTFATSSCSLLFFTDFCLDFLLHF-------HKPSPLY 565 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ---KPKRGDRSRRDD 711 I +L + IP V +LG N + + FDL+++ + S D+ Sbjct: 566 DKPGPYIGSLSSLSLIPKGYVFILGAN-----KTTSSDIFDLLNRTTTHEELAFSSTEDE 620 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 + + FL+ L+S + +L+ISYI + Q N PS + + + + Sbjct: 621 ENFHFLQILVSTKHELHISYISSAAQFN---LPSPFLNHIKETLDLP------------- 664 Query: 772 SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL------P 825 P+ ++ ++E+ + + A + + L Sbjct: 665 ---------VETLPTQPYLSAFFKNKACLHTSQEYNYSLAHAFYSKKALLPSLFIPTVKQ 715 Query: 826 FTLPETVPLETLQRFWAHPVRAFFQ--MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 LP+ + L + + P+ F + L++++ + P +++QI Sbjct: 716 VNLPQHLSLNEIIKGIFSPLDLFLKTNYNLRISYPEHLKKQQKLFP------TKHQIEDF 769 Query: 884 LLNALVEQD---------DAERLFRRFRAAGDL--------PYGAFGEIFWETQCQEMQQ 926 V+++ AE LF +R L P + + + + E + Sbjct: 770 WNECFVDKEHDLIPSISPHAEELFTYYREKTILLRNGLDKDPKHSPYTVTFSSSIFEERP 829 Query: 927 LADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPS---------------- 970 + + + + N VQI G + V +GL Sbjct: 830 YHESYLF-----PPLSLSFQGNPVQIHGTIHGVCNEGLYLCSIDPGDSLKKTTRTLGSLP 884 Query: 971 --LLSVAQGMQLWLEHLVYCASGGNGESRLFL----RKDGEWRFPPLAAEQALHYLSQLI 1024 Q ++ ++ V S + E PP + YL +++ Sbjct: 885 ETSSEQKQLLERYVALAVLQMSQHLSSDSALIKLTSFNXKENHHPPFS--DPEXYLRKVL 942 Query: 1025 EGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAY 1075 E Y S P+ +L S W KT D + + ++A+ L + Sbjct: 943 EVYHLMSSQPIPLL--SPLCW-KTLDDEEKFHQAVLSAISEEAKNPSLPIF 990 >UniRef50_A8SUE8 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A8SUE8_9FIRM Length = 789 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 93/652 (14%), Positives = 185/652 (28%), Gaps = 119/652 (18%) Query: 197 LESATTCPPGLPSRVFICGIS-----ALPPVYLQ----ALQALGKHIEIHLLFTNPCRYY 247 L+ P P ++F+ IS + P A A K E++ Y Sbjct: 137 LKDFQIDPKRYPEKMFMSEISKAKEKYMSPDEFARRNAADYAATKVAEVY-------TEY 189 Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG 307 G +K + + + + +N + D QD + L Sbjct: 190 QGRLKKNNAMDFDDLIYKTVELFEHNPDVLDTYQNRFRYIMVDEYQDTNHIQFLMVKMLA 249 Query: 308 RDYIYLLSDLESSQELDAF-----------VDVTPDNLLHNIQSDILELEN-RAVAGVNI 355 R Y L + Q + F D + ++ + N A A I Sbjct: 250 RKYRNLCVVGDDDQSIYKFRGANITNILNFEKEYEDAKVIKLEQNYRSCGNILAAANAVI 309 Query: 356 EEFSRSDNKRPLDPLD--SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA 413 + +K D I+F C + E +++ R+ ++ + + RDI ++ Sbjct: 310 QHNEGRKDKALWTDQDAGEKISFDQCDTEYAEGDLVASRIKTLVRQ--GVGYRDIAILYR 367 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 V G +PY + + ++ ++ L + ++ + + Sbjct: 368 TNAQ-----SRVLGEKMVYANIPYRVYGGTNFYARKEIKDVLAYLKVINNTTDNLYFRRV 422 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 ++VP + I E L + + + G Sbjct: 423 VNVP----KRGIGEASLSKVESFADAYG-------------------------------- 446 Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC-- 591 + DE G+ + G + + +R L L+ Sbjct: 447 -------LSMMDAAARADEIPGMAVKTSGKIKQFATLIQSFRDMLQDGESLDAVYDRILE 499 Query: 592 -----RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 +++ + + + + E + LS +E+ L Sbjct: 500 DTGYESELIAEHTEESMTRLENIDELRNKVVEFVDE------NEEAGLSEFLEEI--ALV 551 Query: 647 QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR 706 + S V + TL + + F V + GM D V+P +A D Sbjct: 552 SDLDSMSEDDNQVKLMTLHSAKGLEFPYVFICGMEDRVFPSGMALNS----------DDP 601 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYI--------- 755 +++R L + A +KLY+S + + S ++E+ + Sbjct: 602 DALEEERRLCYVGITRAMKKLYLSAARERMMHGNRISSDVSRFIREIPPLLFEHEADMRN 661 Query: 756 --GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 + D D R P + Q SYAR+ Sbjct: 662 MAKRRETESVDRYNRGDLYSDSSYGSSYNYKPRTP-GKEYGQKNPYSSYARQ 712 >UniRef50_Q6GFF2 ATP-dependent DNA helicase pcrA n=81 Tax=cellular organisms RepID=PCRA_STAAR Length = 730 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 96/695 (13%), Positives = 209/695 (30%), Gaps = 123/695 (17%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA----WQAP-LW---------KAL 172 L+ + A L D+ V + LA T + E QA +W + L Sbjct: 37 LTHRIAYLLDEKDVSPYNVLAITFTNKAAREMKERVQKLVGDQAEVIWMSTFHSMCVRIL 96 Query: 173 VEYTHQLGQPR----WHRANLYQRFIETLESATTCPPGLPSRVFICGISAL-----PPVY 223 ++G R + + L++ R+FI IS L P Sbjct: 97 RRDADRIGIERNFTIIDPTDQKSVIKDVLKNENIDSKKFEPRMFIGAISNLKNELKTPA- 155 Query: 224 LQALQALGKHIEIH-LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSEN 282 A + + H + Y + L + +R + +N Sbjct: 156 ----DAQKEATDYHSQMVATVYSGYQRQLSRNEALDFDDLIMTTINLFERVPEVLEYYQN 211 Query: 283 AGQLFNSDGEQDVGN------PLLAS---------------WGKLGRDYIYLLS-DLESS 320 Q + D QD LLAS +G G D +LS + + Sbjct: 212 KFQYIHVDEYQDTNKAQYTLVKLLASKFKNLCVVGDSDQSIYGWRGADIQNILSFEKDYP 271 Query: 321 QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCH 380 + F++ + IL N + + + + I ++ Sbjct: 272 EANTIFLEQNYRST-----KTILNAANEVIKNNSE---RKPKGLWTANTNGEKIHYYEAM 323 Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 + + E E + ++ + +D+ ++ V +PY + Sbjct: 324 TERDEAEFVIREIMK--HQRNGKKYQDMAILYRTNAQ-----SRVLEETFMKSNMPYTMV 376 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 + ++ +S L + + + +++VP + + + ++ + ++ Sbjct: 377 GGQKFYDRKEIKDLLSYLRIIANSNDDISLQRIINVP----KRGVGPSSVEKVQNYALQN 432 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 I D + E + + + L L ++ Q + DE Sbjct: 433 NISM---FDALGEADFIGLSKKVTQECLNFYELIQSLIKEQEFLEIHEIVDEVLQKS--- 486 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 +R L +E LE + + ++ F + E L EQ + Sbjct: 487 ------------GYREMLERENTLESRSRL--ENIDEFMSVPKDYEENTPLEEQSLINFL 532 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 + I + V + T+ + + F +V ++GM Sbjct: 533 TDLSLV---------------------ADIDEADTENGVTLMTMHSAKGLEFPIVFIMGM 571 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 + ++P A GD ++R + A+ A++ LYI++ + Sbjct: 572 EESLFPHIRAIKS---------EGDHE-MQEERRICYVAITRAEEVLYITHATSRMLFGR 621 Query: 741 ER--FPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 + PS ++E+ + + ++H + + Sbjct: 622 PQSNMPSRFLKEIPESLLENHSSGKRQTIQPKAKP 656 >UniRef50_Q03NA6 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Lactobacillus brevis ATCC 367 RepID=ADDB_LACBA Length = 1201 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 125/1008 (12%), Positives = 253/1008 (25%), Gaps = 173/1008 (17%) Query: 82 KESAFNKQSMSWKLMT-----LLPQLLEREDFTLLRHYLTDDSDKRKLF----------- 125 + F+ ++W M LP++ L+ + +D+ +F Sbjct: 69 QVQVFSFTRLAWFFMKNEPIYQLPRISPAGLNMLIYQIIQTHADELTIFRGEVDRPGFVS 128 Query: 126 QLSSKAADLFDQYLVYRPDWLAQWETGHLVE-GLGEAQAWQAPLWKALVEYTHQLGQPRW 184 QL+++ A+ F V D ++ E L +++A Sbjct: 129 QLATQLAE-FKVGQVTAADLMSAIEQLDTTNTDLQAKLHDLMIIYEAFETQMMGKFVENT 187 Query: 185 HRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPC 244 N ++E ++ G S L Q + L + + N Sbjct: 188 DLLNQLATYLEQQVDLQHA------HFYLEGFSQLSAQERQLVAILIQRSASVTVALN-- 239 Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWG 304 D Y KL + + Sbjct: 240 -------LDHGYPQKLPDK-------------------------------------TTLF 255 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK 364 L + + + +D + +D+ L+ A + + K Sbjct: 256 FQSAKLYQQLYMVAQANRVPVLIDQQAKT--ARVSADLQALDTYWQASQTLSPQPSAVEK 313 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 I + EV + ++ ++ RD +V+ +D+Y I Sbjct: 314 PT------HIQIVQAANRYVEVSRVATQIRQLVATG-NYRYRDFLVLTRHLDAYQTVIDP 366 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 +F + +PY HP +E +L + + DV +L +L R Sbjct: 367 IFQ----AQAVPYFDDADIRMADHPFVELLNALFDVQRRNYRYADVFRVLKSELLLPRDA 422 Query: 485 ITE--------EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 E + L +V ++G+ ++ G+ Sbjct: 423 DGELMAVPAYRQALALTENFVLKNGLEGQHWWTQDKDWVYNRFAVGDG--GVQTTRDDQI 480 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 + V ++ L + L W Sbjct: 481 SAQINRIRRFVKQTLPPFFARLKVAATYTDAAAVLYQFVANAGVSERLMTWRD------Q 534 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 A D + I+ E L + L + SQ Sbjct: 535 AIAAGDLTKAGQPEQTWAAFCDILDEFHTILGDLPTVLPDFQALLQAGFAGAKFSQIPST 594 Query: 657 -GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR--------- 706 V I +++ K+ ++G P P + + R Sbjct: 595 LDQVVISESGIVQANNRKITFIMGATADTMPDNQIPTTLLADNDRQDLSARLQQVDDGTY 654 Query: 707 ------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 ++ + YL A +S ++L SY S S S V + DY G S Sbjct: 655 LRDDAATQLAGEPYLNYLAFMSGSERLIFSYPAMSDDARSGLQLSPYVARIKDYFGLSID 714 Query: 761 LPGDEALNCDESEARV--KAHLTCLHTRM----------PFDPQNYQPGERQSYAREW-- 806 + + DE+ T H P + Sbjct: 715 IAAANPVAEDEAILPFVGTRRTTLRHLVQASHDSQLREVPLSRSWLYVLNLLRTDPTYGE 774 Query: 807 -----LPAASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQVNFRT 859 L + S + + + L+ ++A+P F + L + R Sbjct: 775 LTTKLLGSLSYRNVPTQLTPDIVTQLYGTKINTSISKLEEYYANPYAYFLKYGLNLQERD 834 Query: 860 EDSEIPDT-EPFILEGLS-------RYQINQQLLNALVEQDDAERLFRRFRAAGDLP--- 908 + P + F L ++N L+ ++ + + + + P Sbjct: 835 VFALSPASTGEFFHATLDGLMKLVNDQKLNLAALDDQQLREMTDEVMAKLLDTTENPQFA 894 Query: 909 -------YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG------------ 949 G + +T Q + L ++ + + E+ Sbjct: 895 ILESSHRMGYIRQQLMKTMRQMAKTLQEQSKRTKLRPKRTEVQFGLGDERGLAALSFDVG 954 Query: 950 ----VQITGWLPQ---VQPDGLLRWRPSLLSVAQGMQLWLEHLVYCAS 990 V + G + + VQ ++ + E A Sbjct: 955 KRRQVTVRGRIDRLDAVQVKDKTYLGIVDYKSSEHKFSYQEAYYGRAM 1002 >UniRef50_UPI00016C0037 ATP-dependent nuclease subunit B n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0037 Length = 1100 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 97/698 (13%), Positives = 212/698 (30%), Gaps = 88/698 (12%) Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 N+ I + + + +++ C + + E+E++ + + D T Sbjct: 255 FANKTADIQFIADNYFATHSIKQPRDSANVRLFACRNFESEIELVAQNITRFV-RDDTYR 313 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 +I ++ +++ Y + V G +PY + + + Q++P + ++LL + Sbjct: 314 YNEIAIITGNLNLYRSHLTTVLGQYD----IPYFLDETKTIQANPAVNFILNLLEVITQH 369 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + +L+ L +L D +E + YL ++ E GI + E E +T + Sbjct: 370 WNLTAILSFLKSGILT---DFADEDIDYLENYLYEHGINYKNKWLEXWEEETDSTLINDL 426 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 R + ++LG Q ++ + ++ +L L + + + Sbjct: 427 RTRVASIILG--------IEQKIIAHKHRGKILTS------NLCRILYDFLVEINFANTI 472 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 W + + I Q I+ + V ++ + L Sbjct: 473 -RWESKSESEIEHTLSKNFNLALEYKHIYQTILDILDRLVDILGNQYVNIATFKSILTTC 531 Query: 645 LDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 E++ + + + R K+V L+G+N+GV+P Sbjct: 532 FKHEKVGTIPATQDQILVGEIPRTRLPKQKIVFLIGLNEGVFPANPINDSLFSDMDLTAN 591 Query: 704 GDRS--RRDDDRYLF------------LEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 + + LF LI + L+ SY PS++ Sbjct: 592 LFNANPNLYE---LFIYSNLYGSELEIYSTLIKPSRYLFASYSMGDD-SGKITRPSIIFT 647 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 L + Y P A + K + L + + + YA W Sbjct: 648 RLKRMF--TMYAPSTTATTFADQIYTSKQAIIALGRAIKQNAGIATLDDSYKYALMWYMQ 705 Query: 810 ASQA-------GKAHSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQV 855 G + L + + + + +++F P F + L Sbjct: 706 HQPDAIVQTVNGLFFTNQQDKLQTDIAKKLYSNNQVTTVSRIEKFRRCPCAYFIEYGLLA 765 Query: 856 NFRTEDSE-IPDTEPFILEGLSRY-QINQQLLNAL--VEQDDAERLFRRFRAAGDLPY-- 909 + R PD L Y ++ Q + + D ++L + L Sbjct: 766 SERKLFKFRTPDIGTIFHSVLEIYPKLLQAAGSTWTTITPDAQQQLVATAVSESMLQNNK 825 Query: 910 --------GAFGEIFWETQCQEMQQLADRV------------IACRQPGQSMEIDLACNG 949 + + + +A ++ ++EIDL Sbjct: 826 LKIKNGHTKYLTKRIETMSNRAITAMASQLKCGKFVPAEYEYKFNDAALPAIEIDLGETT 885 Query: 950 VQITGWLPQVQ----PDGLLRWRPSLLSVAQGMQLWLE 983 +++TG + +V PDG + + E Sbjct: 886 LRLTGTIDRVDAYLTPDGDTYIKIIDYKSGHTQFDFTE 923 >UniRef50_C7H111 ATP-dependent DNA helicase PcrA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H111_9FIRM Length = 753 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 60/462 (12%), Positives = 145/462 (31%), Gaps = 74/462 (16%) Query: 321 QELDAFVDVTPDNLLHNIQSDIL---ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFH 377 + + +F V + ++ + + + A A ++ + I+ Sbjct: 274 ENILSFEKVYKGTKIIKLERNYRSTKNILDAAHAVISNNSKRKEKKLWTGSVEGEKISIE 333 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 V + E E + D++ + + T +DI ++ + +F A +PY Sbjct: 334 VYENAHAEAEFIVDKIRQAVA-EEGKTYKDIAILYRNNSQ-----SRLFEEALKRWDVPY 387 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 I + ++ L + ++ F L ++ P + ++ L + + Sbjct: 388 RILSGIRFYERSEIVDMLAYLRVTENPFDDIAFLRCINEPA----RGLGKKALEKVASFA 443 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 E GI + +L + + L Sbjct: 444 RERGI---------------------------------------SLFAGLLMDECLAELS 464 Query: 558 AELVGHLASLLMQLNIWRRGLAQERP-LEEWLPVCRDM----LNAFFLPDAETEAAMTLI 612 A + + + L E + L + E++A + I Sbjct: 465 AAARRGAEEFIKMIKHAQDMLLDENTRISNVLKYIIETSGYERKLKLADTLESDAKLENI 524 Query: 613 EQQWQAIIA-EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + ++ EG A + + LS +E+ L + + A V + TL + + Sbjct: 525 YELVASVADREGSSAGDDEKLTLSAFLEEI--ALISDVDNHDETADAVVLMTLHSSKGLE 582 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F VV + GM +G++P + +++R L A+++L++S Sbjct: 583 FNVVFIPGMEEGIFPSGQGDDN------------PGKIEEERRLCYVGFTRAKEELFLSA 630 Query: 732 IGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 + PS + E+ + + +++ + + Sbjct: 631 AKWRRHYYEDMYMQPSRFLDEVPEELVKTNVVEASSRDRYTD 672 >UniRef50_B0PD61 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PD61_9FIRM Length = 1106 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 102/666 (15%), Positives = 196/666 (29%), Gaps = 72/666 (10%) Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 I + + P D + C E+E + + A++ + RDI ++ Sbjct: 279 IAQAYPQETPAPYDGAPDGVQIAACEDVYDEIEYIAGEICALV-REKGYRYRDIALIGRA 337 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 ++ Y ++ VF +PY R Q HP++ L RF SE VLAL Sbjct: 338 LEPYLVPLETVFARYD----IPYFADRRVDIQVHPLVNGIFCALDAVRGRFDSEAVLALA 393 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 I L + G+ + G + + Sbjct: 394 KT----CISGIDAVEAGLLENYCFTWGVSGTVWAAPFVNHPDGMEGAFSDEQRERLSRIN 449 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 A + G + + D G + + + L ++ + Sbjct: 450 AARAALIGPLERLA--DSLRGCDG------RGFARAIYSYLEQVDAACRLRDYAEGMEEG 501 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 FL + + ++ GA G ++PL+ L D L + I Sbjct: 502 DARRFLDLSA------QVWDAVIGLLDVFGGALAGISLPLARLTDLLRLGVSTVDIGSLP 555 Query: 655 LA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR---------G 704 V T +R + V ++G+N+GV+P +P G +++ + Sbjct: 556 QTIDQVIAGTADRIRPNAPRAVFVIGLNEGVFPLWSSPSGIFSAAERERLRTQGVDLLRT 615 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 +RY AL A + L+++Y R + R S V E+ +G Sbjct: 616 PEQTALFERYYVYFALTQASEALWLTYPLRDAA-GAARTASSAVDEVRALVGAPARGSAG 674 Query: 765 EALN----CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF 820 AL + + H + + A +A Sbjct: 675 GALARAAGERSAFDAMMRHWRDDTPETAVLRSYFTEQDPARIRTLEALGAPRAFSLEGRG 734 Query: 821 VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILEGLSR-- 877 F + + ++ P F ++ L++ R P ++ I L + Sbjct: 735 AARALFGTRMRISPSRAELYYECPFSYFCRVGLRLRPRRRAEFNPIESGSLIHLVLEKIV 794 Query: 878 --------YQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 Q+N +LL + + L R ++P A + + +Q+L + Sbjct: 795 KKYGGRGLAQLNGELLRSEITAIIDADLKARIANYDEMP--ARFKYLFRRLVGTIQRLIE 852 Query: 930 RVIACRQPG--QSMEIDLACN--------------GVQ-----ITGWLPQVQPDGLLRWR 968 R+ + +L G + I + ++ DG R Sbjct: 853 RLALEFGQSAFEPAAFELPIGLDAPVQPLDLRAPDGTRVIVEGIVDRVDVLEQDGKKYVR 912 Query: 969 PSLLSV 974 Sbjct: 913 VVDYKS 918 >UniRef50_A6NVW2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVW2_9BACE Length = 1118 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 98/775 (12%), Positives = 209/775 (26%), Gaps = 101/775 (13%) Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 A R L L + A ++ + + +E Sbjct: 235 AGIFAPARHTARSLLRLARENGVPARTEIQEN-----------RAKEGPEELAFLEAHLF 283 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + P + I+ SP EVE +L ++ ++ RDI V ++ Y Sbjct: 284 DAPETPWAEKPAHISLFKAGSPYAEVEYTAGEILRLV-QEEGYRFRDIAVTARSMEGYGE 342 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 I+ +F +P ++ P+L S L+ + +D+ L + Sbjct: 343 LIETIFARY----GVPVFLAKMSDILQKPILALITSALAAVAGDYQYDDLFRYLKTGLT- 397 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 ++EE L + + +R G + + G LL Sbjct: 398 ---GVSEEDRDLLENYALKWDLR-GSRWTQKGDWTMHPKGYGLPVRPEDEALLARLNAVR 453 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + + ++ L + + LEE ++ Sbjct: 454 RQVIAPLEELRKNPDHTGLGHTK------ALYAFLERIGLPERLEERTAALQE------R 501 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPV 659 + + + + + + + L Q + ++ V Sbjct: 502 GEPALAQEYSQLWDILCNALEQCAQIVGDTPMEADEFARLFSLVLSQYDVGAIPVSLDRV 561 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK---------PKRGDRSRRD 710 + + K V LLG +DG P+ G + + + Sbjct: 562 TAGEMPRLAHKHCKAVFLLGADDGAIPQAAPSPGLLNDDDRSLLASYGLELAPTLTEKLN 621 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 + + E A ++L +S+ E+ P+ L+ L + E Sbjct: 622 RELTIVYETCALAGERLSVSWAAM-GSGGEEQRPAFLIPRLRGLFPALRPVTEAELEGAF 680 Query: 771 ESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE 830 L+ + + + + E+ P + +A L + Sbjct: 681 --------RLSAPRPALELAGRYPEAAQALRAMPEYAPLVERMEQAAGLTRGKLSRAAVD 732 Query: 831 TV-------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSE-IPDTEPFILEGLSR----- 877 + + ++ + F Q L+ R + P+ F+ L Sbjct: 733 ALYGSRVPMSASRMDKYKSCHFSYFMQYGLKAEPRKKAGFQAPEYGTFVHYVLEHVFQSE 792 Query: 878 ------YQINQQLLNALVEQDDAERLFRRF--RAAGDLPYGAFGEIFWETQCQEMQQLAD 929 ++ L+AL ++ + A + + + ++ +A+ Sbjct: 793 EWRDENGGVDGDKLDALTDEIVERYIKEELGGLAEETPRFRYLFQRLLKPVRAVVRNVAE 852 Query: 930 RVIACRQPGQSME-----------IDLACNGVQI-----TGWLPQVQPDGLLRWRPSLLS 973 + A + E ++L +GV I + DG L R Sbjct: 853 ELSASDFKPIAFELGFGSGKDLPPVELEVDGVTISISGFVDRVDGWVKDGRLNLRVVDYK 912 Query: 974 VA----QGMQLW----LEHLVYCASGGNGESRLFLRKD----GEWRFPPLAAEQA 1016 +W L+ L+Y + LF + G P A A Sbjct: 913 TGRKSFDLTDVWNGMGLQMLLYLFTLQKEGRDLFGGHEIDPAGVLYLPARDAVIA 967 >UniRef50_Q3KL55 Exodeoxyribonuclease V gamma chain n=11 Tax=Chlamydia RepID=Q3KL55_CHLTA Length = 1006 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 169/1091 (15%), Positives = 314/1091 (28%), Gaps = 189/1091 (17%) Query: 6 HSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTL--SQKFGIAANID-F 62 SN +VL A + + P ILV S+ WL+ L + I F Sbjct: 11 FSNYPEVLLAKLAQDLFSI-NQTPMTKRWILVPSSDTDHWLRRELVKASSNHIFMGTHIF 69 Query: 63 PLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKR 122 +F+ +F + S + ++ + LL + + +L S Sbjct: 70 ASFDAFVKYLFTGT--RLVDLSTPDHITLPLTIYNLLKESSFNSSSEVSYSHLQKLSSIF 127 Query: 123 KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQP 182 K F F Q +K L P Sbjct: 128 KKF-------YTFSQ-----------------EPSTNNPY------YKNLFAQLKDSYTP 157 Query: 183 RWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTN 242 S P P + I G LP ALGK+ +H + Sbjct: 158 LETIF----------SSILDHPLEYPCSLHIFGYPQLPQHVASFFVALGKYFPVHFYCFS 207 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS 302 P Y+GD+ +A L R E E + D LLA+ Sbjct: 208 PSAAYFGDLLSDKAMAALSPRIPEPQQETWEKYVLTDRLA----------------LLAN 251 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 + D E + F + LH ++ L+ Sbjct: 252 LAHKSQSLQNFFLDCSVPYE-ELFQPYEKLSSLHIVKDSFFHLQP--------------I 296 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 +++ +I S REV L + +L + ++I ++ +++ Y + Sbjct: 297 DQKLFSNSPQTIFVRQAPSASREVHQLFSLVSQLLHS--GVPAQEIFILSSNLSKYETLL 354 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 + +F +LP ++ Q+ + + +++ S+ D+L +L P L Sbjct: 355 RGIFE-----PHLPLYLTKTEKTQTRTLKNKLLLVVTFLFSKGSLNDLLRILSHPDL--- 406 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 ++ + ++ W + + + R+L Y G Sbjct: 407 --LSPLETTKMGFLTHKLTHYW----------KSLSQKDSPLTQLIHRILDEYPFIDDTG 454 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL--AQERPLEEWLPVCRDMLNAFFL 600 AE + LL L ++++ EE + L F Sbjct: 455 SVNE-----------AETWEVVVPLLHTLQQVTASYIESKDKTYEEHSRLIFSTLENIFF 503 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI-SQRFLAGPV 659 E A + + + Q + L++ + L SQ + Sbjct: 504 LSTEEHALLVSLSKTLQPFVRSSC--------SLTIFIEFCLDFLSHIPGHSQLYNQPGP 555 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 I +L + IP +LG N + D + S D+D FL+ Sbjct: 556 FIGSLNSLSLIPKGYTFILGANKKDH-SLDTSFLIDPSLIQEDFLFSSTEDEDNLHFLQT 614 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG-QSHYLPGDEALNCDESEARVKA 778 ++S + +L+ISY+ S PS ++ L+D + Q +L G + S + Sbjct: 615 IVSTKHQLHISYLSSSKN---PALPSSALKHLLDAVPIQEEHLSGKLYAKKNFSSEPLHQ 671 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQ 838 + P KA S F TLP + L+ L Sbjct: 672 SYQVYYRMAQVSPL--------------------QNKAPSLFKSDTTKTLPSHLSLQHLI 711 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN------------ 886 + + P+ F + +F + +E LL+ Sbjct: 712 KAFKDPLNFFLSTQHGFSF-HPKALFSKSEKVFPSPHDAKAFWNHLLSSKTPLPTTNYLS 770 Query: 887 ---ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEI 943 + D + + +R P + + Q D + Q + + Sbjct: 771 AFTESLYTDVQDSVSKRLETLQKDPATTPFSVVFSDQL-----FHDPLHPNDQQVSPLLL 825 Query: 944 DLACNGVQITGWLPQVQPDGLLRW--RPSLL---------------SVAQGMQLWLEHLV 986 L + + G + V G+ + P + ++ +L + Sbjct: 826 SLPLKNIHLQGTIHGVCSKGVYLFSMHPGEAFKKTQKTHGFPKDAFELESYLESYLSLAL 885 Query: 987 YCASGGNGESRLFLR---KDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGG 1043 AS + LR D E PP ++ + YL + I Y + + + Sbjct: 886 LQASHLLPKEATILRVTPHDIEPILPPFSSPE--SYLIRAIHLYELLQNQAIPLPSAQAW 943 Query: 1044 AWLKTCYDAQN 1054 ++K A Sbjct: 944 EYIKKTDSASQ 954 >UniRef50_A8MLJ7 ATP-dependent DNA helicase PcrA n=3 Tax=Firmicutes RepID=A8MLJ7_ALKOO Length = 739 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 63/558 (11%), Positives = 156/558 (27%), Gaps = 101/558 (18%) Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG------NP 298 R Y +K L + + R +N + D QD Sbjct: 189 RLYQDRMKSNNALDFDDLIMKTVQLFQTHPTVLRYYQNKFKYILVDEFQDTNMAQYTLIS 248 Query: 299 LLA---------------SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL 343 LLA +G G D +L F P+ + ++ + Sbjct: 249 LLAKSHGNLCVVGDDDQSIYGWRGADIRNIL----------GFEKDFPNTQVVKLEQNYR 298 Query: 344 ELEN-RAVAGVNIEEFSRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEED 400 ++ A + + + +K+ I ++ ++ E + + + E+ Sbjct: 299 STKSILDAANMVVANNTDRKSKKLWTDNQDGEIIQYYRANNEYDEASFISGTIEKL-NEE 357 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 + ++ R +PY I ++ ++ L Sbjct: 358 ENRPYSEFAILYRTNAQ-----SRALEEMLMKRAIPYKIYSGTRFYDRKEIKDILAYLRT 412 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 ++ V +++VP + I + + Sbjct: 413 IENPVDDVSVKRIINVP----KRGIGIKSIDRF--------------------------- 441 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 YA + + ++L D+ + + R Sbjct: 442 ------------DEYAEGKNESFFGALLHVDQMPDQSTRVKVQTNKFTELIQSLRDR-QD 488 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 E + + + + AE + + Q ++ + + + + L + Sbjct: 489 EMSVTDIVKEIYEKTGYIDALMAEDKIEAESRIENLQEFLS--VTKDFDENSEVKTLEEF 546 Query: 641 LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 LA+ + + + V + TL + + F VV + GM + ++P ++ Sbjct: 547 LARTSLETTLDENDEENTVTLMTLHSAKGLEFPVVFIPGMEESIFPSAMSLQ-------- 598 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQS 758 + +++R L + A++KLY+S+ S + E+ + + Q Sbjct: 599 -----ENNLEEERRLCYVGITRAREKLYMSHAMTRTLYGRTNANPISRFLGEIPEELIQI 653 Query: 759 HYLPGDEALNCDESEARV 776 + + + + Sbjct: 654 DRPYNRKRDLKEMQTSPL 671 >UniRef50_A7VXI0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXI0_9CLOT Length = 1125 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 97/689 (14%), Positives = 201/689 (29%), Gaps = 100/689 (14%) Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 +E+ + + I + E + + R+ ++ ++ R+I Sbjct: 277 EELKLLEQVIYRQERLESGEVPGHIVLYNASDIYEEADFVARRIQKLV-QEEGYRYREIT 335 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 V+ + +SY V +A +PY + + P++ +S L S + S++ Sbjct: 336 VIARETESYRG----VLDAALESYGIPYFMDQPEPLEEKPLMTLVLSALECVQSGYRSDE 391 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVN---ESGIRWGIDDDNVRELELPATGQHTWR- 525 + LL + ++ E + L + SG RW P + + Sbjct: 392 LFRLLKTGLT----ELQTEEIAALENYALLWNLSGRRWLEPFTMHPRGFSPEMTEEDQKK 447 Query: 526 -FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 GL R+ + P + + G + + L + + Sbjct: 448 LEGLNRLRETV-----------MEPLAQFEESLRSGTGK--GIAYGVYQLLERLNAAQNI 494 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 +M + + I+ + + + Sbjct: 495 RRMADELENM------GEWNLAQEQIRLWDMLMEILDQMALVLKEQHLSPRRWSELFQLV 548 Query: 645 LDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK--- 700 + E I+ V++ R + V L+G +G +PR G +++ Sbjct: 549 VQSEEIAFIPQGVDEVSVGGADRSRPAAPRAVFLIGAEEGEFPRTPVSAGVFSDAERRLM 608 Query: 701 -----PKRGDRSRRD-DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 P + ++RYL A +S ++L++SY + R PS LV+E+ Sbjct: 609 ISMGLPLYDSLEKLAVEERYLAYMAAVSPSERLFVSYASSDLSGG-ARSPSSLVREVRKI 667 Query: 755 IGQ-SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP---GERQSYAREWLPAA 810 + EA + L R P + + G Y Sbjct: 668 FPECPVADRSQEAFSDLLWSPEPAFELAASLWREPSEREETLKRYFGGLPEYQDRLEAVG 727 Query: 811 SQAGKAHSEFVQPLPFTL----PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 A + F P V +++++ + F + L R Sbjct: 728 RAASEEPIAFQNPENAQKLFGSNLRVSASQIEKYYLCRFQYFCRYGLGAKERK------- 780 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 P + + L + LL ++ E L + + E+++ Sbjct: 781 --PAVFDALEYGSVMHYLLENMLRAFSGETLASMKK---------------QELLAEIRR 823 Query: 927 LADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL- 985 L D ++ G + + R+R L +A Q+ L HL Sbjct: 824 LLDSY-----------VETNLGGWE----------EKSPRFRYLLARLADTAQMLLSHLG 862 Query: 986 --VYCASGGNGESRLFLRKDGEWRFPPLA 1012 + + + L + K E L Sbjct: 863 KELAQSDFVPADFELSIGKGKELEPLVLE 891 >UniRef50_B8I5U1 ATP-dependent DNA helicase PcrA n=14 Tax=Firmicutes RepID=B8I5U1_CLOCE Length = 785 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 62/535 (11%), Positives = 153/535 (28%), Gaps = 85/535 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIY 312 P L R R ++ + +L + VG+ + +G G + Sbjct: 203 PEVLDYYQRRFRYILVDEYQDTNTAQYTLVRKLSEAQENLCVVGDDDQSIYGWRGANIRN 262 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDP 369 +L F ++ + +N A ++ + + + Sbjct: 263 ILD----------FEKDFKKCCTIKLEQNYRSTQNILDAANHVIGNNTGRKCKSLWTDNK 312 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 S I + E + ++ D +D V+ V Sbjct: 313 GGSKIVICENDNEHEEALYAAREIQRLIF-DEDRKYKDFAVLYRINAQ-----SRVLEEM 366 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY I + ++ I+ + L + + + +++VP + I + Sbjct: 367 FMREGIPYKIVGGQKFYDRKEIKDIIAYMRLVQNPGDNVSLKRVINVP----KRGIGDTT 422 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + + + + Sbjct: 423 VENAEILAYQ---------------------------------------GDVSLFTVISN 443 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD---MLNAFFLPDAETE 606 +E L L + + +N +R + + + + L + + +L + L + Sbjct: 444 AEEFPSLK-RAAQKLGNFSLMINKFRT-MKEHMTISQMLDMVVEDSGILREYELENTVEA 501 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + ++ +++ E + L + L + S + V + T+ Sbjct: 502 QSRIENIKELKSVAIEFEKQSEDN--SLEEFLAHI--SLVSDIDSLQEDQDYVVLMTMHS 557 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F VV + GM +GV+P A + +++R L + A++K Sbjct: 558 AKGLEFPVVFIPGMEEGVFPGYRAIT-----------EGPEQLEEERRLCYVGITRAREK 606 Query: 727 LYISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 LY+S + PS + E+ + + + + N ++ Sbjct: 607 LYLSNARFRTLFGNSSYNRPSRFLAEIPEELVEYPFKSTSHTRNTSQNSGSAFKQ 661 >UniRef50_UPI00016C0C66 ATP-dependent DNA helicase PcrA n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0C66 Length = 731 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 65/458 (14%), Positives = 145/458 (31%), Gaps = 76/458 (16%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 + +G G D +L F + + ++ + +N A + + + Sbjct: 247 QSIYGWRGADISNILE----------FEKDFENTTIIKLEQNYRSTKNILEAANAVVKNN 296 Query: 360 RSDNKR---PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + + + I +V + RE +V+ ++ L E +D ++ Sbjct: 297 ENRKPKVLFTDNETGEQIELYVVKNEYREADVIAAQISKDLSEYR-RDYKDFAILYRTNA 355 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 V +PY + ++ +S L + + ++++ Sbjct: 356 Q-----SRVLEEKMIQSSIPYRMLGGVRFYERKEIKDLVSYLKIIVNVQDDVAARRIINI 410 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + I + ++Q N+ + + N+R+ + Sbjct: 411 P----KRGIGAASIDKIQQAANDYQVNFYEVAKNIRQFGI-------------------- 446 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 E V A+L+ +L +E L + Sbjct: 447 ----------------LGKTATEKVSVFANLIEELKEL---AQEENILALLQAIIVKTDY 487 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 FL + E E A I + + Q + L+ +E+ D + Q + Sbjct: 488 NNFLKETEPEDAADRILNVREFVSKAAAYVQSNEEANLNNFLEEITLVADVDNYDQN--S 545 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 V + TL + + F VV + G+ +G++P ++ D+++ +++R L Sbjct: 546 NAVVLMTLHSSKGLEFPVVFMPGLEEGLFPSHMSASD----------EDKTKLEEERRLC 595 Query: 717 LEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELI 752 + A++KLYI + PS + EL Sbjct: 596 YVGITRAREKLYILQAEERMTYGQIKAVEPSRFIAELP 633 >UniRef50_B0SIS7 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SIS7_LEPBA Length = 1099 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 144/949 (15%), Positives = 301/949 (31%), Gaps = 129/949 (13%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF--GIAAN 59 + + L + + + +++E++++P +++V +T + WL++ + + ++ N Sbjct: 3 IHYFAGLHLHEITSELTKQIKKEQIENPLRMPLVVVPNTNLIPWLKLNIPKYNDSQLSIN 62 Query: 60 IDFPLPASFIWDMFVRVLPEIP---KESAFNKQSMSWKLMTLLPQLLER--EDFTLLRHY 114 I+F I M L ++ S L + ++ ++ Y Sbjct: 63 IEFTFLEKAILKMIFTSLQIPAWAESVEFYDYNSFKKDCFRYLYENQTSLFQNHPEIKTY 122 Query: 115 LTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQW---ETGHLVEGLGEAQAWQAPLWKA 171 + S+ KL+ LS F Y + R +W+ QW E ++ L W Sbjct: 123 I---SELPKLYYLSDLLTKYFKDYELNRSEWIHQWLGNEKSNIPNQLTSDPYWD------ 173 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 +E LG + NLY L + +S L Y+ L+ + Sbjct: 174 -LEKEIYLGTNDGGKKNLYYYL------NKGKDLSLQGNLHFFCLSNLSGTYINFLKTVS 226 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 K NP + + + +N + N Sbjct: 227 K---------NP-------------------NANLNIYIYQFHNGKVIGQNPEKTKNYLS 258 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 + LA +++ L E +L ++S +LE + + Sbjct: 259 KFAKPQSYLA------KEFSNLTKQKE-------TSKYASGGMLAKLKSILLEEQVKEEN 305 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT-LTPRDIIV 410 + D ++ S RE+E + +L + L+ D + Sbjct: 306 YL----------------NDQTVRVWNAPSEYREMESIAHDILHKISTSKGNLSLLDFAI 349 Query: 411 MVADIDSYSPFIQAVF----------GSAPADRYLPYAISDRRARQSHPVLEAFISLLS- 459 +V + + Y I+ VF P + L Y++SD A+++ + + F L Sbjct: 350 LVPNTNDYKAAIEWVFHGGIYTTQRIDETPTLQRLNYSLSDLVAKETSLLYKVFEILFQS 409 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + R ++++ LL P++ + I + +D E Sbjct: 410 FLNKRIQKDELIHLLQNPLITGKNKIDSID--------QTHSVIQLLDSLGSLYDENKEE 461 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQ--SVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 +T FG+ R +L M W V+ + + + + L + Sbjct: 462 NPYTISFGVKRAVLS-VMSDEATTWSHMGVITDPLAKEDSVLYLNLIWEEIKSLQSFFES 520 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 + P+ E + N F ETE + + ++ Sbjct: 521 EFLQLPINERFKAFQTKWNQFLKFSEETENERIY----LTEWLGNIAKWCDTEWNHVTDF 576 Query: 638 RDELAQRLDQE-----RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L + ++ +L + I L PMR IPF + ++G+ +G +P Sbjct: 577 LQFLQLQTEEIFSNIPTQKGNYLTEGITISLLQPMRPIPFSHIYIVGLGEGKFPGSKDVS 636 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 F+L K D +R + L E ++SA+ + SY+G++ ++ E P + E++ Sbjct: 637 RFNLRKNDSKPWDLNRIEIQESLLWETILSAEDSITFSYVGKNTLEDKEFEPCSSLFEVM 696 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 +G + + + N + + E LP Sbjct: 697 HSLGIERATEIPLTPYSRFYDREILHSYDYSRNLKQYRSLNTDLPKPDFTSLEDLPLPHS 756 Query: 813 AGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL 872 + + + + ++ + +P+ + + L F ++ E EPF Sbjct: 757 ------------EWKFKKQISIASIASAFKNPILPYIKENLG--FMEDEEETSLEEPFYF 802 Query: 873 EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC 921 L + + L E E + + F I Sbjct: 803 NALETFLFKSKFLPLFTESLAKEETWPWDKDTIKQKINEFSAIAENKAE 851 >UniRef50_Q6MI36 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MI36_BDEBA Length = 762 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 62/483 (12%), Positives = 143/483 (29%), Gaps = 79/483 (16%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV-AGV 353 VG+ + + G D +L F D + ++ + N A Sbjct: 252 VGDEDQSIYSWRGADIKNILD----------FEKDFRDAKVIKLEENYRSSANIVNGATA 301 Query: 354 NIEEFSRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 I+ S+ +K D I + E + + +M+ E + D + Sbjct: 302 VIKNNSQRKDKTLFTSNDPGDLIHVREEKNEYEEGRFVAKTIQSMMNEGEG-SYNDYAIF 360 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 V +PY + ++ IS L L + + Sbjct: 361 YRTNAQ-----SRVLEEQLRTMGIPYRLVGGVRFYERMEIKDMISYLKLSINPADDIALK 415 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +++VP I + + + ++ Sbjct: 416 RIINVPA----RGIGKTTIEKIEEY----------------------------------- 436 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 A +++ E A G + + + ++ + LE + V Sbjct: 437 ----AAHKNLSMFEAAEKACEERLFNAGTTGKIRRFIDLMKDLQQNAQHLKLLEFFAVVL 492 Query: 592 --RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 + L A ++ A ++ IA+ + + ++ L +E+A D + Sbjct: 493 DRTEYLAALKKDESPESQARIENLEELDNAIAQFVQERGEES-TLISFLEEMALVNDVDS 551 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 + Q V + TL + + + V ++G+ + ++P + + Sbjct: 552 LDQE--QNSVTMMTLHISKGLEYPYVFVVGLEENLFPSARSAESDN----------EQDV 599 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEAL 767 +++R L + A+QKL+++Y E+ PS ++E+ + Sbjct: 600 EEERRLAYVGMTRARQKLWLTYAKMRRVWGQEQFNPPSRFIKEIPQNLIDFKTSAEAPRF 659 Query: 768 NCD 770 Sbjct: 660 MAR 662 >UniRef50_C0WLM6 ATP-dependent deoxyribonuclease, subunit B n=3 Tax=Lactobacillus RepID=C0WLM6_LACBU Length = 1181 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 133/1102 (12%), Positives = 284/1102 (25%), Gaps = 187/1102 (16%) Query: 15 ALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMFV 74 M I+++++ P + LV + I F + + Sbjct: 16 EKMIDILKKQKSAHPDDQFFYLVPNH-------------------IKFESEVGILKRLAG 56 Query: 75 RV--LPEIPKESAFNKQSMSWKLMTLL-----PQLLEREDFTLLRHYLTDDSDKRKLFQL 127 + + ++W + ++ LL +T+ D LF Sbjct: 57 ANDDVTAQSSVQVLSFTRLAWYFLRTTSQYQKQRISPAGINMLLYQIMTEHQDDLILFSQ 116 Query: 128 SSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRA 187 + DQ Q L E + + Sbjct: 117 EAGLPGFIDQ-------IAHQISVMQAGNVLPEDL----------------MKMNENQES 153 Query: 188 NLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQ---ALQALGKHIEIHLLFTNPC 244 L + L + R+ Y L L +++ L Sbjct: 154 RLSNDLRDKLHDFSIIYAEYEKRID--------DQYFDNHNVLNLLSDYLQRQDL----- 200 Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWG 304 +Y I D + R + + P + Sbjct: 201 SHYHFYISDFSKFTAQECRLVETLTQGGASMTMSLILDKP--------YRTALPDQPNLF 252 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK 364 + ++ +T D I +D+L+LE + + + Sbjct: 253 YQSAKLFLRFYKFAADNQIPYLPIITADQP--RISADLLKLEKFWIQSSGLGAIDDNPIT 310 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 SI + + E++ + R+ M+ D +++ +DSY + Sbjct: 311 VS-----KSIQVYQADNQYSELDQMATRIRQMVSTGK-YRYSDFLILTRHLDSYETILDP 364 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD----SRFVSEDVLALLDVPVLA 480 +F + +PY +++ HP++E +L + D + +DV+ L ++ Sbjct: 365 IF----TMQQIPYFRDIQKSMVDHPLVELLEALFDMYDPDRPRNYRYDDVMRFLKSELVL 420 Query: 481 AR------FDITE--EGLRYLRQWVNESGI---RWGIDDDNVRELELPATGQHTWRFGLT 529 + I + + + V ++G +W DDD Sbjct: 421 PQATDGTAMKIDDYRQAVSLTENLVLKNGFEGKKWTQDDDWQYVWVADDDDGTVLTEKDK 480 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 R+ + + ++ LP + A+ A L + L++W Sbjct: 481 RIT--QQINVIRHLIKNALPNFYNRFYKAKTN---ADAAGILYRFLVENGVVNRLQDWRN 535 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 D D + + + + +++ E + + + Sbjct: 536 AAVD------RQDINRSDEIEQVWRTFCSLLDENVRILGDKPFVAQDFWALIYAGFEGAT 589 Query: 650 ISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF----------DLMS 698 SQ V I ++ KV ++G ND P ++ D +S Sbjct: 590 YSQIPSTLDQVQISESGMVQMNNRKVTMMIGSNDETMPERIVNKSLFGDDDVLQIQDNLS 649 Query: 699 QKPKRGDR--SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 D + + YL A S +L SY + D S S V + + Sbjct: 650 DSQYLNDPADEQMAAEPYLNYLAFTSPSSRLIFSYTNH-VNDESGINLSPYVSRIAAHFN 708 Query: 757 QSHYLPGDEALNCDESEARV-KAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 N + T H G+ Q Sbjct: 709 LKVVNYAAVPDNQRAVNVYIGSKRATLHHLIQVIQDTYKNKGQLNDTWAFIFNQLKQDPD 768 Query: 816 AHS------------EFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVN 856 A PL + E + + L+ F+ +P F + L++ Sbjct: 769 AAPLTNQLLGSIDYKNVPVPLSREIAEKLYGSALNISISQLESFYENPYEYFLKYGLRLQ 828 Query: 857 FRTEDSEIPDT-EPFILEGLSR-----------------YQINQQLLNALVEQDDAERLF 898 R + P + F E L R ++ + + + F Sbjct: 829 EREQFELSPASTGQFFHEALDRIISMVHEQKIDLAGLSDRDVDDLVAENVEAMVNDPDNF 888 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI---------------ACRQPGQSMEI 943 + T Q ++ + D+ + + + Sbjct: 889 QYIILNSSNRMHYITLQLQATIQQMIRTMRDQQRITPMRPQNTELIFGQPSSKGLKGLSF 948 Query: 944 DLACN-GVQITGWLPQVQPDGLLRWRP---SLLSVAQGMQLWLEHLVYCASGGNGESRLF 999 +L V + G + ++ + R A + + Y + + L Sbjct: 949 ELPNQKKVNVRGRIDRIDSMKVNDKRYFGIVDYKSADKKFDFNQ--AYIGTSMQLLTYLD 1006 Query: 1000 LRKDGEWRFPPLAAEQALHYLS 1021 + + + L + + L+ Sbjct: 1007 VLR---YNLSTLNPDSSDALLA 1025 >UniRef50_C4Z8S4 ATP-dependent DNA helicase PcrA n=17 Tax=Firmicutes RepID=C4Z8S4_EUBR3 Length = 763 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 76/557 (13%), Positives = 160/557 (28%), Gaps = 79/557 (14%) Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN------P 298 + Y +K L + + + + + D QD Sbjct: 173 KEYQNALKQNNALDFDDLLVKTVELFKLDKEVLDYYQERFRYIMVDEYQDTNTVQFELIR 232 Query: 299 LLA----SWGKLGRDYIYLLS-DLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAG 352 LLA + +G D + + + F D + ++ + +N A Sbjct: 233 LLAMKYKNLCVVGDDDQSIYKFRGANIYNILNFEKHFEDAKVIKLEQNYRSTQNILDAAN 292 Query: 353 VNIEEFSRSDNKRPLDPLD--SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV 410 I +KR ITF S E + + + ++ + +D V Sbjct: 293 SVISNNVGRKDKRLWTDNGAGDRITFEQLESGFEEADYVARSIARLVRKGE-ARYKDCAV 351 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 + +F +PY I + ++ ++ L D+ V Sbjct: 352 LYRTNAQ-----SRLFEEKFIAANIPYKIVGGVNFYARKEIKDILAYLKTIDNGHDDLAV 406 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 +++VP + I + + + E GI Sbjct: 407 KRIINVP----KRGIGATSINKVTDYAIEKGI---------------------------- 434 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 + ++ DE G+ A G + +M + R A+ + + + Sbjct: 435 -----------DFYTALRYVDEVPGM-ARSAGKIKPFVMFIQSLRAR-AEMDSVSQLIQA 481 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ-YGDAVPLSLLRDELAQRLDQER 649 D AE + +I + + + + LS +E+ L + Sbjct: 482 IIDETGYVDELKAEGTDEAEQRIENIDELINKAVDYEQGEENPTLSGFLEEV--ALVADI 539 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 + V + TL + + F V L GM DG++P ++ D S Sbjct: 540 DGLDENSDYVVLMTLHSAKGLEFPNVYLAGMEDGLFPSYMSITSDD---------ATSEI 590 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEAL 767 +++R L + A++ L I+ + + S V+E+ + Sbjct: 591 EEERRLAYVGITRAKEHLTITSARMRMVRGETQFNKVSRFVKEIPRELMSGEVYEPKRRD 650 Query: 768 NCDESEARVKAHLTCLH 784 + E ++ Sbjct: 651 DDIERNSQSTYRKAKEA 667 >UniRef50_B0TWY9 DNA helicase II n=19 Tax=Francisella RepID=B0TWY9_FRAP2 Length = 742 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 73/604 (12%), Positives = 181/604 (29%), Gaps = 84/604 (13%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 Q QA L K +++ + + L Q FI + L + I + + Sbjct: 115 DQDEQAQLIKKVIKSLDLDDKKYPPK--LLQNFINKQKDKAVRSNKLTKQYDI-NYTHIY 171 Query: 221 PVYLQ--ALQALGKHIEIHLLFT------NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDR 272 Y + L ++ L R Y+ + + + + Sbjct: 172 TAYEERLLLDNALDFADLLLYLYELFSLNQQLREYYQSLFRYILIDEFQDTNQVQYM--- 228 Query: 273 ELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPD 332 L L N D + G G + + ++DL + + + Sbjct: 229 WLKLLVTDNNYMMAVGDDDQSIYGWR-----GAVVDNIHKYVADLNDVEIIKLEQNYRST 283 Query: 333 NLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR 392 +IL++ N + + S + + + + E + + D+ Sbjct: 284 -------KNILKVANSVIKNND---NRMSKELWSAAEDGEKVEVYCAVNERDEAKYIIDK 333 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 + + D + DI ++ ++ V + +PY I ++ Sbjct: 334 IRQLH--DGGVDYSDIAILYRS-----NYLSRVLEESCIYTSIPYRIYGGFRFFDRAEVK 386 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 ++ L L + + +++ P I + L +R + + + + Sbjct: 387 DALAYLRLAVTSNDNLAFERIINTP----TRGIGNKTLDTIRNFSQINNVSY-------- 434 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 W+ + ++ + + A L+ ++ ++ Sbjct: 435 -----------WQATID-----------------IIQKEIVTKRTASLLLKFIEIINAIS 466 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL---GAQYG 629 + L+ ++ LE + +L ++ D E + ++ + + Sbjct: 467 SQIKDLSLDKLLETVINE-SGLLASYQEKDTEKDRQKIDNLKELISAAKDFEPQIELLDD 525 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 + L L+ + V + T+ + + F+ V L+ +GV+P Sbjct: 526 NTDILQDFLSF--AVLEAGEMQADENTDSVQLMTIHASKGLEFRYVFLVAAEEGVFPPSS 583 Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVL 747 + + + + + ++R LF A+ A + L ISY + S Sbjct: 584 IINAEEAYTSSESKKIQEKLAEERRLFYVAVTRAMKALTISYAQVRNIFGRSSFQVKSRF 643 Query: 748 VQEL 751 + E+ Sbjct: 644 LMEI 647 >UniRef50_D2R9Y0 Putative ATP-dependent DNA helicase PcrA n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2R9Y0_GARVA Length = 1023 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 66/514 (12%), Positives = 139/514 (27%), Gaps = 83/514 (16%) Query: 263 RQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE 322 + + + Q VG+ + + G D Sbjct: 379 QYELIRELAGVDVKQNSANPSQQNNTPASITVVGDSDQSIYAFRGADIRN---------- 428 Query: 323 LDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLDSS--ITFHVC 379 + F P+ ++ + + A I K+ L IT + Sbjct: 429 IQDFEKDFPNATTIMLEQNYRSTQTILDAANAVISHNQGRKPKKLWTALGKGTPITGYAA 488 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 S Q+E + + + + + D+ +M A LPY + Sbjct: 489 DSAQQEAAWVAQEIARL-AGEEGVAYSDMAIMYRANAQSRSL-----EDALVKAGLPYQL 542 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 ++ ++ L + ++ +L+VP + + L + Sbjct: 543 VGGTKFYERREVKDALAYLQSMANPDDDVNMRRILNVP----KRGLGARAEALLTLYAQT 598 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 G+ WQ++ + G+ Sbjct: 599 QGV---------------------------------------SFWQALEHLESIEGMPTR 619 Query: 560 LVGHLASLLMQLNIWRRGLAQERP-LEEWLPVC---RDMLNAFFLPDAETEAAMTLIEQQ 615 L ++ + + + + +L + +AA Q Sbjct: 620 TATKLKEFRELMHNLITCMQNDDSKPSKVIDSILNDSGLLEDLQRSEDPQDAARVDNLSQ 679 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR-FLAGPVNICTLMPMRSIPFKV 674 Q++ AE ++ + A D +++ G V + TL + + + V Sbjct: 680 LQSVAAEYEQNTPDA--SVAGFLETTALVADSDQLPDENEDTGKVTLMTLHTAKGLEYPV 737 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V L GM G +P A D ++R L + A+Q+LY++ Sbjct: 738 VFLTGMEQGTFPHSRA------------LEDDGELCEERRLAYVGITRAKQRLYVTRAAV 785 Query: 735 SIQDNSER--FPSVLVQELIDYIGQSHYLPGDEA 766 Q + PS + E+ D + D Sbjct: 786 RAQWGQAQDMLPSQFLDEIPDNLIDWKRRESDVE 819 >UniRef50_C5QUC7 Possible ATP-dependent DNA helicase PcrA (Fragment) n=1 Tax=Staphylococcus epidermidis W23144 RepID=C5QUC7_STAEP Length = 433 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 47/445 (10%), Positives = 129/445 (28%), Gaps = 70/445 (15%) Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 + + I ++ + + E E + ++ + ++ ++ Sbjct: 6 RKPKGLWTANSGGDKIQYYEAMTERDEAEYVVKEIMK--HQRGGKKYSEMAILYRTNAQ- 62 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 V +PY + + ++ +S L + + + +++VP Sbjct: 63 ----SRVLEETFMKSNIPYTMVGGQKFYDRKEIKDLLSYLRVIANSNDDISLQRIINVP- 117 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 + I + ++ + ++ I Sbjct: 118 ---KRGIGPSSVEKIQTYALQNNI------------------------------------ 138 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 + ++ D L + + + L +E+ E + ++L Sbjct: 139 ---SMFDALAEVDFIG-----LSKKVTQECISFYEMIQNLIKEQEFLEISEIVDEVLQKS 190 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEG-LGAQYGDAVPLSL--LRDELAQRLDQERISQRFL 655 D + + + + Y + PL L + L I + Sbjct: 191 GYKDMLDREQSIESRSRLENLDEFMSVPKDYEENTPLEEQSLINFLTDLSLVADIDEADT 250 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 V + T+ + + F +V ++GM + ++P A D +++R + Sbjct: 251 QNGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKS----------EDDHEMEEERRI 300 Query: 716 FLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 A+ A++ LYI+ + + PS ++E+ + + SH + ++ Sbjct: 301 CYVAITRAEELLYITNATTRMLFGRSQSNMPSRFLKEIPEDLLDSHTGQKRQTISPKSQP 360 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGE 798 R + T + + Sbjct: 361 KRGFSKRTTSTKKQVSSSDWKVGDK 385 >UniRef50_C9XK50 ATP-dependent DNA helicase n=5 Tax=Clostridium RepID=C9XK50_CLODC Length = 762 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 60/496 (12%), Positives = 138/496 (27%), Gaps = 85/496 (17%) Query: 300 LASWGKLGRDYIYLLS---DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 + +G G D +L D ++ + + + IL+ N+ ++ Sbjct: 257 QSIYGWRGADIRNILEFEKDYDNVHVVKLEQNYRSTQV-------ILDAANKVISNNIE- 308 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + I + S E + + D + + +D V+ Sbjct: 309 --RKRKKLWSEKKEGELIKIQLTGSEIEEADFIADSIAQ-IARKENRPYKDFAVLYRANA 365 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 P A +PY I ++ ++ L + + + +++V Sbjct: 366 QARPV-----EDALNRSQIPYNIYGGTKFYERKEIKDLLAYLRVIQNPQDDISIKRIINV 420 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P R I + + N Sbjct: 421 P----RRGIGLRTIEKIEDRAN------------------------------------LK 440 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP---VCRD 593 ES + + S + ++ L + + +E+ L + Sbjct: 441 QESIYSVLIDIETNSDISTKARASISGFVDIIGTLRTIKEVYPVSKLIEKVLDTTGYMDE 500 Query: 594 MLN-------AFFLPDAETEAAMTLIEQQW-QAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 ++ E + + + + A+ E + L +A Sbjct: 501 LVEIRNKNEKDLTGKGEEAQDRIDNLREFISIALEFESSNDDTYENKDLETFLTSIALTS 560 Query: 646 DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 + + V++ T+ + + F VV L GM +G++P A Sbjct: 561 ES---NDEEDNDRVSLMTIHTSKGLEFPVVFLTGMEEGLFPISRAIKSMS---------- 607 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPG 763 S+ +++R L + A+++LY+S + S ++EL + + Y Sbjct: 608 DSQIEEERRLCYVGITRAKEELYMSLTEKRTLYGKTNVAIASRFMEELPEECIERLYKVK 667 Query: 764 DEALNCDESEARVKAH 779 E S + + Sbjct: 668 KELSYSKASYNMLDKY 683 >UniRef50_C2EDG9 ATP-dependent deoxyribonuclease, subunit B n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2EDG9_9LACO Length = 1170 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 108/912 (11%), Positives = 250/912 (27%), Gaps = 128/912 (14%) Query: 18 EFIVERERLDDPFEPEMILVQSTGMAQ-------WLQMTLSQKFGIAAN--IDFPLPASF 68 + + R ++P +V + + +++ SQ I A + Sbjct: 19 FEQLAKWRKENPNRMVYYIVPNHIKFESEVNALKYMRQIFSQDEKIFAAHDLQVFSFTRL 78 Query: 69 IWDMFVRVLPE-IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQL 127 W + IP+ S+ + + +L L + L+ + +S + QL Sbjct: 79 AWYFMKDMPAYQIPRISSAGSNMI---IYRILRDLKDE-----LQVFSGGESQPGFITQL 130 Query: 128 SSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRA 187 + + +L Q P+ + Q E LG A L L + + + Sbjct: 131 AKQMTEL--QNGCIMPEDVMQMAEKLPKESLGSK----ALLRSKLHDLALVYTRFIEMTS 184 Query: 188 NLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYY 247 Y +E L T + + IS + + Sbjct: 185 GRYLANMEILTELTQYLEKIDLQNSCFLISGFNQMTAR---------------------- 222 Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG 307 L+ + ++ + + D GN Sbjct: 223 ---------EMLLVEKLIENAESVVVDLVLNHPYVDEPPKSGDLFYRAGN---------- 263 Query: 308 RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 Y L + +D + D+ LE+ + V Sbjct: 264 --LYYQLYAHAHKSKSPVMLDTYAKK--TRVSQDLCNLEDYWINSVAGFSAKEK-----A 314 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + S+ + + E+ ++ M+ +D +++ +D Y ++ +F Sbjct: 315 TFENDSVKIYGAKTRTEEIRFAAAKIRQMVAV-EGYRYKDFLILTRHLDLYKNVLEPIFA 373 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A +P + ++ HP++E +L ++ + D++ LL +L + D+ Sbjct: 374 KA----KVPIFVDLQKKVSDHPLVELLNALFAVKRRHYRYNDMMRLLKTELLIPK-DLKV 428 Query: 488 EG----LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 E L + + G + FG + Sbjct: 429 ETYRRMLDQTENLILKFGYEGSAWLKEKDWIYYRFGESD---FGTRTDAEDRITKEVNVI 485 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 + V + + + L + ++ LE+W + Sbjct: 486 RRYVKEILPPFFKQIDEAENGRKAAVCLVNFLVDNGVKKRLEDWRQNLME------QGLL 539 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNIC 662 + + + ++ E + + L D + + V+I Sbjct: 540 QESERPEQVWNLFCQMMDEFVENLGDLPFEEEDFLNLLQTGFDAGEYRRVPASLDEVSIS 599 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD----------- 711 ++ KVV ++G D V P ++ + + + + Sbjct: 600 ETGMVQPTDRKVVFMIGSTDLVMPDRIQNKSLLSDGDRSLMLENALLSENQVLDETSEKS 659 Query: 712 ---DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD---- 764 + +L A +S +KL +Y + D S V+ + + + Sbjct: 660 MLSEPFLNYLAFLSPTEKLIFTYPHGNDADGG-IKMSPYVERIKQHFLLEELEISEFDKL 718 Query: 765 --EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA--REWLPAASQAGKAHSEF 820 ++ ++ H ++ F Q Y + + + + Sbjct: 719 STPKGTIEDLICEIRRHADEKNSVPAFWKQVYAKMKTVDAEMTEKVMSSLRYRNIPEQLT 778 Query: 821 VQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRY 878 Q + + + L+ F+ +P F + L + R F + S Sbjct: 779 AQNARKLYGKELNTSISKLETFYKNPYEYFLRYGLGLMERDV---------FEMSAASTG 829 Query: 879 QINQQLLNALVE 890 +L+A Sbjct: 830 SYFHAVLDAFFR 841 >UniRef50_C6A858 Superfamily I DNA and RNA helicase n=18 Tax=Bifidobacterium RepID=C6A858_BIFLB Length = 939 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 63/456 (13%), Positives = 133/456 (29%), Gaps = 73/456 (16%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDP--LDSSI 374 + + F PD ++ + + A I S K+ I Sbjct: 333 ADIRNIQDFEKDFPDARTIMLEQNYRSTQTILDAANAVIAHNSARKPKKLWTALGEGDKI 392 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + + Q E + ++L + E+ L D+ +M + Sbjct: 393 IGYAADTAQLEAHWIAQQILHL-HEEKGLPYSDMAIMYRANAQSRSL-----EEGLIQAH 446 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +PY + ++ I+ L + ++ +L+VP + + L Sbjct: 447 IPYQLIGGTKFYERREVKDAIAYLQAIVNPADDINMRRILNVP----KRGLGTRAESQLT 502 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + NE Q W ++ ++ Sbjct: 503 LFANEHN---------------------------------------QTFWWAIEQLEDIE 523 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERP-LEEWLPVCRD---MLNAFFLPDAETEAAMT 610 G+ A + + + R + E + + ML + + + Sbjct: 524 GMSARTANAVRAFRELMTSLRTFAGEHDSKPSEIVAQVLEQSHMLELLRKSEDPQDESRV 583 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS-QRFLAGPVNICTLMPMRS 669 Q Q++ AE L+ + A D +++ + +G V + TL + Sbjct: 584 ENLSQLQSVAAEFEQNTPDT--TLAGFLETTALVADSDQLPGEGHDSGKVTLMTLHTAKG 641 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + + +V L GM G +P A D ++R L + A+++LY+ Sbjct: 642 LEYPIVFLTGMEQGTFPHSRAMENMD------------ELSEERRLAYVGITRAKRRLYL 689 Query: 730 SYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPG 763 + Q E PS + E+ D + Sbjct: 690 TRAAVRAQWGRQSEMMPSQFLDEIPDSLIDWKRREA 725 >UniRef50_Q836J9 ATP-dependent helicase/deoxyribonuclease subunit B n=37 Tax=Enterococcus RepID=ADDB_ENTFA Length = 1196 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 114/864 (13%), Positives = 246/864 (28%), Gaps = 140/864 (16%) Query: 82 KESAFNKQSMSWKLMTLLP-----QLLEREDFTLLRHYLTDDSDKRKLFQ----LSSKAA 132 + F+ ++W + P L + + R L + ++ ++F+ Sbjct: 69 RLQVFSFYRLAWYYLQHTPFYSADVLSDAGAAMIFRKILVEAEEELQIFRGEINKPGFIQ 128 Query: 133 DLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQ------APLWKALVEYTHQLGQPRWHR 186 LF Y R + E +E E Q L + Q+ Q + Sbjct: 129 QLFQLYQEMREGNIEIAELYPFLEKQTENPKGQDLQLKFQDLTLIFTRFQLQMSQYGYES 188 Query: 187 ANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYL---QALQALGKHIEIHLLFTNP 243 A + Q E L++ + I G L + L A +++ LL Sbjct: 189 AEIIQHLSEYLQTVDLSNV----QFVISGYQQFTARELKLIEVLMAQAGSVKVALLLD-- 242 Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASW 303 + Y D+ DP L + Sbjct: 243 -KQYPHDLPDPRSLFYEAGQ---------------------------------------- 261 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 + L L +++ D + D+ L + + + + Sbjct: 262 ------TYHQLYQLARQKQIPILSDYVEKKEVLITNPDLQGLNDYWIQSQEHLPPLSTAD 315 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 R + + + E+ + + ++ + ++I V+ D+D Y ++ Sbjct: 316 WR-----GDGLFLWRAENVKEELTHVATEIRRLVV-EEGYRYKEIQVLTRDLDCYENLLE 369 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 +F +P + A HP++E SL ++ + DVL L + Sbjct: 370 PIFAE----HEIPVYVDRDMAMDRHPLVEWIESLFAIHSYNYRYRDVLRFLRTELFMPMN 425 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 + L W+N+ D + + W + Y E+ + Sbjct: 426 QLATSE-ESLTDWLNQRNAWRRKVDITENVVLAYGYEGYYWSQEKDWEFIRYDFEAEEQ- 483 Query: 544 WQSVLPYDESSGLIAELVGHLA--------------SLLMQLNIWRRGLAQERPLEEWLP 589 + V +E S I + + L + L+ W Sbjct: 484 -EDVATMEEESNAIRQSLQRLLPSYFQAMISAKTGLEAATVFYHFLLQSGVATQLKMWR- 541 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 L A ET +++ E + + + ++ L+ Sbjct: 542 -----LQAIEAGQLETARNHEQTWDALMSLLDEYVTVYGESSFDFTTFQEIFVSGLEGLH 596 Query: 650 ISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR-- 706 S+ A V + + R KV +GM + ++P+++ ++ D Sbjct: 597 YSKVPTAIDQVQVRAMDLTRPGAAKVTFAIGMTEEIFPQKIENKTLLSDEERQTINDTLT 656 Query: 707 ----------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 + + Y+ SA+++LY++Y E PS + + + Sbjct: 657 ENQYLRGTTGRKIAQEPYVAYLVFSSARERLYLTYPSVKDTA-QEVKPSPYFKNIQKDLN 715 Query: 757 QSHYLPGDEALNCDESEA------------RVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 + + + DE+ + + + E+ + Sbjct: 716 LPVFEKNETTIFDDETTSLAHISTYRTLIGELTRLKRQRKETQEGLLPFWLNMEKALMNQ 775 Query: 805 EWLPAASQAGK--AHSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQV 855 P A Q + H + + L E + + ++ F+ + F + L++ Sbjct: 776 SIAPLAKQVFESLTHQNIPEKIDEVLAEPLYGKDIYTSVSRMESFYRCQYQYFSRYGLRL 835 Query: 856 NFRTEDSEIPDT-EPFILEGLSRY 878 R P F E L ++ Sbjct: 836 KERDVFGLSPAATGEFFHEALDQF 859 >UniRef50_Q04T79 ATP-dependent DNA helicase n=6 Tax=Leptospira RepID=Q04T79_LEPBJ Length = 730 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 77/548 (14%), Positives = 165/548 (30%), Gaps = 86/548 (15%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDY 310 K P +AK + ++ + + L VG+ + + G D Sbjct: 201 KSPDAIAKYRHKWEYVMVDEYQDTNKVQYQLVLLLAGEKRNLCVVGDDDQSIYSWRGADI 260 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN---RAVAGVNIEEFSRSDNKRPL 367 +L+ F P++ + ++ + N A ++ + Sbjct: 261 GNILN----------FEKDFPESTVIKLEENYRSSSNIILAASKVISNNTQRKQKEIFTN 310 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 +P S + + + E + R+ + ++I + F Sbjct: 311 NPKGSPVVLNEFENESEEAHGVITRIRSAYS--YGTEYKNIAIFYRTNSQ-----SRYFE 363 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A + +PY I ++ FI+ LS+ + S +L +++ P I + Sbjct: 364 EALRNLGIPYKIFGGFRFFDRAEIKDFIAYLSVVSNPLDSVSLLRIVNYPP----RGIGD 419 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 G+ +R++ E GI +++ Sbjct: 420 SGIGKIREFSLEKGI---------------------------------------SLLEAL 440 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC---RDMLNAFFLPDAE 604 D A+ G L + + + E +++ E Sbjct: 441 GQEDIPLKKAAKSKGK--ELYSLFSDLIEKVEKSSSPSEIALELLNRSGLVSHLRDEGTE 498 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 A Q+ I E L ++++ +E + L VN+ T+ Sbjct: 499 ESIARLENLQELVNSIEEYEKNSDSP--SLEEYLNQISLITSEEE--SKELTDYVNLMTV 554 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + + FK+V L G+ +G +P ++ +++R LF AL A+ Sbjct: 555 HNAKGLEFKIVFLSGLEEGTFPHSMSLEDSHFGD-----------EEERRLFYVALTRAR 603 Query: 725 QKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 ++L++SY S + +R PS + E+ + A + + K Sbjct: 604 EQLFLSYCRTSRKFGKVEDRIPSRFLSEIPEECFVERVSREHTARSPQGAPLASKTRRIE 663 Query: 783 LHTRMPFD 790 F Sbjct: 664 EKFNSGFS 671 >UniRef50_Q0TN58 ATP-dependent DNA helicase PcrA n=12 Tax=Clostridium RepID=Q0TN58_CLOP1 Length = 751 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 61/469 (13%), Positives = 137/469 (29%), Gaps = 83/469 (17%) Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 + G D +L F P+ + ++ + N A + + + Sbjct: 252 YAWRGADIRNILD----------FEKDYPEAKVVKLEQNYRSKGNILEAANKVIKNNAER 301 Query: 363 N---KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 R I+ H +S + E + + + + D +D V+ Sbjct: 302 KFKILRTEQVEGEKISIHRAYSDKMEAAFVVSEIEKL-KNDNGYKYKDFAVLYRTNAQSR 360 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 F A +PY I ++ ++ L + + S + +++VP Sbjct: 361 N-----FEEALRRAGIPYRIFGGLKFYDRKEIKDILAYLKIIVNPKDSISLRRIINVP-- 413 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + I + + L+ A E Sbjct: 414 --KRSIGDTTVEKLQNH---------------------------------------ATEI 432 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR---RGLAQERPLEEWLPVCRDMLN 596 + +L D GL A + + + L+ + +E L + + Sbjct: 433 DDTLYNVLLDVDYVPGLTARSINPIKKFTDMMEEIMVMSEQLSVSQLIEYVLEKTGYLKS 492 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 E ++ + +E+ + + LS +++ L Q+ Sbjct: 493 LKDSKLIEDQSRIENLEELVSDAVEFEKSNEEDK--SLSAYLEKV--ALVQDMDDLEAED 548 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 V + T+ + + F V L+GM +G++P + + ++ R L Sbjct: 549 NYVMLMTVHSSKGLEFPTVFLVGMENGIFPNAACFEHDN------------QMEEARRLC 596 Query: 717 LEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPG 763 + A++KLY++ + S + E+ I + G Sbjct: 597 YVGITRAEEKLYMTSAETRMIFGKTVAYGQSDFISEIPANIKDYVNING 645 >UniRef50_D1CD72 UvrD/REP helicase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD72_THET1 Length = 779 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 67/528 (12%), Positives = 146/528 (27%), Gaps = 57/528 (10%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE-QDVGNPLLASWGKLGRDYIY 312 P L + R + ++ + L VG+ + D Sbjct: 215 PDILQQYRDRWQYVLVDEYQDTNRAQYMLINLLTQEHRNIFVVGDEDQGIYSWRAADIRN 274 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS 372 +L+ + LL E+ + A ++ R + Sbjct: 275 ILN-------FERDYPEAKVILLEQNYRSYQEILDVASHIISSNRLRRPKKLWTNKSGGA 327 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 + + Q E + + + T D VM P A + Sbjct: 328 LVRVREAYDEQDEASYIAREISRLTSLGE-YTYSDFAVMYRTNSQSRPV-----EEAFSR 381 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY I ++ ++ L L + + + +++ + I + ++ Sbjct: 382 YRIPYQIIGGTRFYERREVKDVLAYLRLIHNPHDAASLRRIIEN--TPSGRGIGKGTMKT 439 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L + + I + + + LG G + L + Sbjct: 440 LEDLASRAHI--------------------SLWDAIE-IALGIKSLEEVGAFLPNLEIPK 478 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 E + L L+ +L R L ++ L + +F AE + Sbjct: 479 LQSKAKESLKQLVGLIYELREQRDILTLPHLIDTLL--IKSGYASFLSSGAEEDLERLEN 536 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 + +I + + L E+ L + + + V + TL + + + Sbjct: 537 ARDLISIAQDYAAI--DTSEALVEFLQEV--ALQSDVDTMQNNGNQVTLITLHAAKGLEY 592 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 KVV ++G +G+ P + S +++ L + A +KLYISY Sbjct: 593 KVVFIIGFEEGLLPHARSMDR------------ESDIEEECRLAYVGVTRAMEKLYISYA 640 Query: 733 GRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 + + PS + + + + Sbjct: 641 FHRNVFGATQTNVPSRFLANIPPDLLDGSLPSLGRRGPGRLTSTTSPR 688 >UniRef50_C8W206 ATP-dependent DNA helicase PcrA n=2 Tax=Clostridiales RepID=C8W206_DESAS Length = 737 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 76/518 (14%), Positives = 149/518 (28%), Gaps = 79/518 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIY 312 P L + + R ++ + + L VG+P +G G D Sbjct: 212 PNVLERYQHKFRYILVDEYQDTNYVQYLLVKMLAQKSRNLCVVGDPDQGIYGWRGADIQN 271 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLD 371 +LS F P+ + ++ + +N A I KR Sbjct: 272 ILS----------FERDYPEACVVTLEQNYRSTQNILDAANHIISYNQGRKEKRLWTDAG 321 Query: 372 SSITFHVCHSPQR--EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 VC S E + +++ + ++ + V+ V Sbjct: 322 KGSPIIVCKSRDEFAEARHVVEQIKHL-HLVEGVSYSECAVLYRTHAQ-----SRVLEEI 375 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 LPY I ++ I+ L + + + +++VP R I + Sbjct: 376 MLRYGLPYNIIGGLRFYERKEIKDVIAYLRVIVNPADEVSLSRIINVP----RRGIGDVS 431 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L + + E+GI G+ + Sbjct: 432 LTKIFAFAAEAGIPAGL------------------------------------AMEMAEQ 455 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 +G + L SLL + L + L Sbjct: 456 IPGLNGKARKQAALLGSLLQVWRRQQEFLPVTDLTVDILER-TGYRQELEYEGTVEARTR 514 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 +++ ++ + EL+ D +R + A VN+ TL + Sbjct: 515 LENLEEFLSVTRLYDLETVEGTLG--EFLSELSLVTDADRDNGE--AERVNMMTLHTAKG 570 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V L+ M +G++P A D +++R L + A+QKLY+ Sbjct: 571 LEFPFVFLVAMEEGIFPHNRA------------LSDAGELEEERRLAYVGMTRARQKLYL 618 Query: 730 SYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDE 765 SY + + PS ++E+ + + + Sbjct: 619 SYSFQRTIYGNTNYCRPSRFLEEIPVDLVSGAHPYEER 656 >UniRef50_Q2RGX9 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=Q2RGX9_MOOTA Length = 729 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 74/544 (13%), Positives = 150/544 (27%), Gaps = 82/544 (15%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDY 310 ++P L R + ++ + L D VG+P +G G D Sbjct: 203 QNPLVLRYYQQRWQHILVDEYQDTNHAQYILVRLLAGKGDNLCVVGDPDQGIYGWRGADI 262 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDP 369 +L AF + P + ++ + A I+ KR Sbjct: 263 GNIL----------AFEEDFPRARVILLEENYRSTRPILQAANAVIQHNEGRREKRLWTR 312 Query: 370 LDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + + + E + + + D V+ Sbjct: 313 RREGELLHLYRATDERDEGRFIAGEVYRR-HQQEGRPFSDFAVLYRTHAQ-----SRALE 366 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A +PY I ++ ++ L + + S +L +++VP R I E Sbjct: 367 EAFIQAGVPYEIVGGLKFYQRKEIKDILAYLRVIANPDDSLSLLRIINVP----RRGIGE 422 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L L A + ++ + Sbjct: 423 ATLARLEAA---------------------------------------ATSEGESLYRVL 443 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 D G+ A L L+ L+ R+ ++ + + + +AE Sbjct: 444 ERVDTIPGIPARGRQALRELVEMLDNLRQQ-QEKITVTDLVATILQETGYQAELEAERTP 502 Query: 608 AMTLIEQQWQAIIAEGLGAQ-YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + + L ++A + + S V + T+ Sbjct: 503 EAQARLENLKEFQTVTRSYDQGAPESSLGDFLTQVALVAESDTYS---GNAAVALMTMHT 559 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F VV L G+ +GV+P + D + +++R L + A++ Sbjct: 560 AKGLEFPVVFLAGLEEGVFPHFRS------------LDDPAEMEEERRLCYVGMTRAREV 607 Query: 727 LYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 LY+++ S PS + E+ + Q + SE R + Sbjct: 608 LYLTHAWTRNLYGSTMSNPPSRFLDEIPADLIQGEGTGLRSGVLSRTSEERDDRGRSTRR 667 Query: 785 TRMP 788 P Sbjct: 668 QPAP 671 >UniRef50_A8LAX0 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria RepID=A8LAX0_FRASN Length = 851 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 65/457 (14%), Positives = 135/457 (29%), Gaps = 72/457 (15%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLDSSITF 376 + + + F P+ + ++ + + + A I ++ KR Sbjct: 362 ANIRNIVEFEQDFPNAAVILLEQNYRSTQTILSAANAVIARNAQRKPKRLWSDAGDGERI 421 Query: 377 --HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 V + E + + + L ++ P D+ V VF Sbjct: 422 VGFVADNEHDEAAFVAEEI-DRLGDENLARPADVAVFYRTNAQ-----SRVFEEIFIRVG 475 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 LPY + + ++ L + + + ++ +L+VP R I + Sbjct: 476 LPYRVVGGVRFYERREIRDLLAYLRVLVNPTDTVNLRRILNVP----RRGIGDRA----- 526 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 M+ +A +++ DE Sbjct: 527 ----------------------------------EAMVSAFAERERIAFSEALSRVDEVP 552 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETEAAMTLI 612 G+ + + L R L PL L+ D Sbjct: 553 GVATRSARSIRDFVALLEGLREQLP-AGPLAVIEATLERTGYLSELVAEDTIEAQGRVEN 611 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV-NICTLMPMRSIP 671 ++ ++ E + L+ +++A D ++I + V + TL + + Sbjct: 612 LRELVGVVQEFTERRPDGT--LAEFLEQVALVADADQIPDDDGSDGVVTLMTLHSAKGLE 669 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F VV L G+ DGV+P GD + +++R L + A+ +LY++ Sbjct: 670 FPVVFLTGLEDGVFPHMRT------------LGDPTGLEEERRLAYVGVTRARARLYLTR 717 Query: 732 IGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEA 766 PS + E+ D + + LP Sbjct: 718 SQVRSAWGQPAYNPPSRFLGEVPDSLVEWRRLPEPAP 754 >UniRef50_A9BDV1 UvrD/REP helicase n=44 Tax=Cyanobacteria RepID=A9BDV1_PROM4 Length = 809 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 67/546 (12%), Positives = 155/546 (28%), Gaps = 66/546 (12%) Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWG 304 R YW + + + + L + + ++ VG+ + + Sbjct: 246 RSYWHNRFKHLLVDEYQDTNWTQYELIKLLVTNGINPSFFSSWSKRSVFVVGDADQSIYS 305 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK 364 D+ L+ E + ++ ++ L + + A + ++ + Sbjct: 306 FRAADFRILMGFQEDFKNKNSLQGLSNVVKLEENYRSTSTILDAANSLISNNKERLDKVL 365 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 + I C E E + RL + + L DI ++ Sbjct: 366 KATRGEGELIKLTRCDDEISEAEAVVHRLRLLEAHNKDLKWGDIAILYRTNAQ-----SR 420 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 V + +PY + ++ ++ L L + S +L +L+VP + Sbjct: 421 VIEESLVRWNIPYIVVGGLRFYDRREVKDILAYLRLLINPSDSVSLLRILNVP----KRG 476 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 I + ++ ++ GI Sbjct: 477 IGKTTVQRFSDASSQLGIP------------------------------------LWEVV 500 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 G A+ + L+ L + + ++ + ++ + Sbjct: 501 SDPEAIRSLGGRSAKGLLKFKELIDDLRLSLNNTEPSQLIQLVMEK-SGYISELIATATD 559 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 Q+ A + +A L L + + + + TL Sbjct: 560 EAEERRRNLQELVN--ASLQYQEENEAADLEGFLA--TAALASDADKKDTAHDRITLMTL 615 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + + F +VCL+G+ G++P D + +++R L L A+ Sbjct: 616 HSSKGLEFPIVCLVGLEQGLFPS------------YRSLDDPASLEEERRLCYVGLTRAK 663 Query: 725 QKLYISYIGRSIQDNSERFP---SVLVQELI-DYIGQSHYLPGDEALNCDESEARVKAHL 780 ++L++ + R P S+ + E+ + I L G AL + R+ Sbjct: 664 ERLFLFHATERRIWGGMREPAVSSIFLSEIPSELIEGDIQLAGGAALRRERRMDRLTRVD 723 Query: 781 TCLHTR 786 Sbjct: 724 RREDQL 729 >UniRef50_A8U8N1 Exonuclease RexB n=1 Tax=Carnobacterium sp. AT7 RepID=A8U8N1_9LACT Length = 1206 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 114/957 (11%), Positives = 251/957 (26%), Gaps = 158/957 (16%) Query: 8 NRLDVLEALMEFIVERERLDDPF--EPEMILVQSTGM-----AQWLQMTLSQKFGIAANI 60 N+ VL + + + F P+ I Q+ +Q+ G ++ Sbjct: 13 NKRSVLLDEIAESLTNHTEESIFYLVPDHIKFQAEMTVLGSLSQYPYFKNKPMMG-MMHL 71 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 W +I ++ +S + LL + E T+ R Sbjct: 72 QVFSFTRLAWYWLKDT--DIYAKTQLTTTGLSMLIRKLL--IEHEEKLTIYRG------- 120 Query: 121 KRKLFQLSSKAADLFDQYLVYR------PDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 + + + DLF + R + + +++A Sbjct: 121 EVRKEGFVQQMTDLFLELRSGRITQIDLDQMILNLGNSPKETDFKLKLQDLSLIYQAFDA 180 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 + I+ + ++I + AL K Sbjct: 181 ALLNKYIESEDIVS---ALIQKVTELDLSETT----IYIESYYQFTAQEQALILALMKAA 233 Query: 235 E-IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ 293 + + + T D Sbjct: 234 KKVTIALTT-----------------------------------------------DKAY 246 Query: 294 DVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 V P + + + Y L L + + D ++ + E N+ Sbjct: 247 AVEKPEMHNLFQTSGTTYYKLYQLARQNNVPVY----KDKVIQEKDASYCEELNQLEDFW 302 Query: 354 NIEEFSRSDNKRPLDPLD---SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV 410 L D + I + Q E+ + + ++ +DI+V Sbjct: 303 VETSQLSPATTVSLASSDVMGNCIEVWAAENKQAEITHVAKEIRKLVATGH-YRYKDILV 361 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 + ++D Y I+ +F + I HP++E +L+S+ + DV Sbjct: 362 LTRNMDDYLAIIEPLF----TSHAIELFIDSAELMNQHPLIEVIDALVSIYKRNWRYADV 417 Query: 471 LALLDVPVLAARF----DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 + LL ++ F +++E + + Q V + D L + W Sbjct: 418 MRLLRTELVIPAFEEQESLSKERAQRVSQQVERAQKYREKVDITENVLLAYGYEGYHWTK 477 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 Y E A+ + + ++++ I V L L + + L + + ++ Sbjct: 478 TEPWHYTRYFYEDAEFQSDNDQRIEQTANSIKTAVSGL------LVPFFKRLEKAKTSKD 531 Query: 587 WLPVCRDMLNAFFLPDA--------------ETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 + + D E Q + ++ E + + Sbjct: 532 AAKELYLFMETVGVNDQIGFWRDQAIEDNNLEEARKHEQTWQTFLQLLDEYVEVLGDEPF 591 Query: 633 PLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 L L D S + V + R K+ +LG+ D P + Sbjct: 592 DLDSFHAILMTGFDNATYSMVPPSIDQVTFSGIEGTRIGTAKLTFMLGVTDAHLPAKTEN 651 Query: 692 LGFDLMSQK------------PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 + K + + ++ +A + + +KL SY N Sbjct: 652 KSILTEEDRDFFSYFLDETQYLKPTVEAVMASEPFIAYQAFLDSSEKLIFSYPTSDETKN 711 Query: 740 SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK------AHLTCLHTRMPFDPQN 793 + S V + + + ++ T M + Sbjct: 712 GPKL-SPYVDRIAKAFQLPIQAKLMDITSLEDPTGNELLDFVGTKKTTISQLLMVLRKEQ 770 Query: 794 YQPGERQSYAREWLPAASQAGKAHSEFVQPL-------------------PFTLPETVPL 834 Q G+ ++ + + + +F L + + + Sbjct: 771 DQKGQLNAFWQNLYMFFKRDKQVARDFNHLLVSLVKKNVPMPLRNTIATDLYGKDLYLSV 830 Query: 835 ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD-TEPFILEGLSRYQINQQLLNALVE 890 L+ F+A F L++ R P T F + L + + ++ + Sbjct: 831 SRLEAFYADHYGHFLTYGLKLKERDVFELSPAGTGEFFHDALDH--LFKTIIQKNLS 885 >UniRef50_B1C8W2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8W2_9FIRM Length = 741 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 60/550 (10%), Positives = 152/550 (27%), Gaps = 81/550 (14%) Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGK 305 Y + + + + + +N + D QD A K Sbjct: 178 EYQKRLLSSNAMDFDDLLLNMNILFAKCPEVLNKYKNRFKYILVDEYQDTNLSQYAIVSK 237 Query: 306 LGRDYIYLLSDLESSQELDA-----------FVDVTPDNLLHNIQSDIL---ELENRAVA 351 L D+ + + Q + F + D + ++ + + N A Sbjct: 238 LAEDHRNICVCGDDDQSIYGWRGASIRNILEFEEDFEDAAVIRLEQNYRCTKNILNAANG 297 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + + + I + +S E ++ + + E + DI ++ Sbjct: 298 VIEHNQRRMGKTLFTDNDEGEKIKYLNANSDLEESSLISREIFCL-NEYHGIPYSDIAIL 356 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 + R +PY I ++ ++ L L + ++ Sbjct: 357 YRTNAQ-----SRMLEEGLMRRNIPYQIVAGTKFYDRMEIKDILAYLKLIVNPQDDLALI 411 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +++ P + I + ++ + Sbjct: 412 RVINTP----KRGIGPASVEKIKDY----------------------------------- 432 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 A ++ + D S + L + + R L + L + + Sbjct: 433 ----AFMKGTSMYEVIKHIDSSPLFKGAIKEKLMNFRDTIEEIR-RLPENNGLMDIVINT 487 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV-PLSLLRDELAQRLDQERI 650 + + + + ++ + + L + L Sbjct: 488 IHLSGYEEMLKEGKVENASNRLENLDELVNAAGDFESNEEENTLEAFLE--NAALVAGVD 545 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 S + V + TL + + F +V + GM + ++P A + S + Sbjct: 546 SYDEDSSKVLLMTLHNAKGLEFNIVFMPGMEENLFPTYRAVN------------EDSEME 593 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALN 768 ++R L + A+++LY+S R PS + E+ D + + + + Sbjct: 594 EERRLCYVGITRARKQLYMSSAESRRVYGRNEYRNPSRFLLEVPDELIEGTNVIKESNKE 653 Query: 769 CDESEARVKA 778 + ++ +K Sbjct: 654 KELLKSSIKR 663 >UniRef50_A1AUN0 ATP-dependent DNA helicase PcrA n=10 Tax=Desulfuromonadales RepID=A1AUN0_PELPD Length = 762 Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 71/539 (13%), Positives = 163/539 (30%), Gaps = 90/539 (16%) Query: 256 YLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL---------LASWGKL 306 L + R+ E + + + ++ + G + + Sbjct: 196 RLLEQFPEVRQRCQERFQWIMVDEYQDTNPVQYRLIRLLAGERRNLCVVGDDDQSIYSWR 255 Query: 307 GRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE---LENRAVAGVNIEEFSRSDN 363 G D +L F PD + ++ + + A A V+ R Sbjct: 256 GADIRNILE----------FEKDFPDVAVVRLEQNYRSTTTILKAAGAVVSRNIGRRGKT 305 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 +P I +H S + E ++ ++++ + ++ V Sbjct: 306 LWTENPEGEKIRYHRVESDREEARLVAREIVSL--RSRGIPLEEMAVFYRTNAQ-----S 358 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 + A LPY I + ++ ++ L + D+ + +++VP Sbjct: 359 RLVEEALVSEALPYHIVGGVRFYARMEVKDILAYLRILDNPADEISLKRIINVP----SR 414 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 I + + Q V SG Sbjct: 415 GIGGATIDRISQRVASSG---------------------------------------ASF 435 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 + ++ S L + +AS + + +R +A R L E + Sbjct: 436 YAAMAECAGSGLLGSGPRARVASFVDMMERFREMVAL-RGLPELCQTVMEESGYLARLRE 494 Query: 604 ETEAAMTLIEQQWQAIIAEGLGA-QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNIC 662 + + + + ++A + LS ++++ D E+ Q + V + Sbjct: 495 SRDQEDSERLENLEQLLAAMEEFCEKEPQAGLSAFLEQVSLVSDLEQGGQGKPS--VTLM 552 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 TL + + F+ V ++GM + ++P A D M +++R L + Sbjct: 553 TLHAAKGLEFRAVFMIGMEERLFPHVRALDDLDGM------------EEERRLCYVGMTR 600 Query: 723 AQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 A+++LY+ R E+ PS ++++ + P L + + + Sbjct: 601 ARERLYLLNTRRRYLFGQEQCNPPSRFLKDIPAGLLDDGGEPSQPGLGFRSAAEQAGRN 659 >UniRef50_C1A8M7 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8M7_GEMAT Length = 820 Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 60/474 (12%), Positives = 133/474 (28%), Gaps = 77/474 (16%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN---RAVAGVNIE 356 + +G G D +L F P + ++ + N A A + Sbjct: 271 QSIYGWRGADIRNILD----------FERDFPGARIVRLEENYRSTPNVLALANAVIAEN 320 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 R R P ++T + E + + + +L + RD ++ Sbjct: 321 TERRGKTLRATRPAGEAVTLIEALDERDEADFIAETILTRMSRSDLAR-RDCAILYRTNA 379 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 A R +PY + + ++ L L + E ++V Sbjct: 380 Q-----SRAIEDAFRRRNIPYRLIGAVRFYDRREIRDLMAYLKLVANPADDEAFRRAVNV 434 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + + + + L + G + +L A Sbjct: 435 P----KRGLGDATIALLAEQAIAEG----------------------------KPMLEMA 462 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 + +L+ +L A + L E + V + + Sbjct: 463 TRFDV--------LSGMRPAARAALEDFGNLVQRLRTMAVDAAVDELLRELVQVIK-YAD 513 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG-DAVPLSLLRDELAQRLDQERISQRFL 655 E + + + PL + L Sbjct: 514 HLRAEGPEGLERIENVREMIAGAAEVVADEGGEVGLTPLDHFLQ--SSTLVAGVDKLDPN 571 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 A V T+ + + F +V + G+ DG++P A D ++ +++R L Sbjct: 572 ADAVTCMTMHNAKGLEFPLVFVCGLEDGLFPLARAAE------------DPAQLEEERRL 619 Query: 716 FLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEAL 767 F + A++KLY++ + ++ PS ++ + + + ++ Sbjct: 620 FYVGITRAEEKLYLTCAEQRRRNGELMYSMPSRFLEVIKPSLAERGKTARAKSE 673 >UniRef50_C0WAB3 ATP-dependent DNA helicase pcrA n=1 Tax=Acidaminococcus sp. D21 RepID=C0WAB3_9FIRM Length = 750 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 75/562 (13%), Positives = 174/562 (30%), Gaps = 78/562 (13%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 D K + + ++ + A + + VG+ + +G G D Sbjct: 204 DRDVREKYQHKFQYVMIDEYQDTNHVQYLLAKLISAPENNLCAVGDIDQSIYGWRGADIS 263 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLD 368 +L F PD ++ ++ + + + A A + R N + Sbjct: 264 NILD----------FEKDYPDAKIYKLEQNYRSTQVILDAANAVIEHNSARRPKNLWTEN 313 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 IT+ + + E E + + ++ D+ V+ +F Sbjct: 314 GNGKPITYFQAFNDRNEAEFTVHNMRRL-RDEAHFHLGDMAVLYRTNAQ-----SRMFEE 367 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 LPY + ++ ++ L L + + + +++ P + I Sbjct: 368 TLIKNGLPYIMVGSLKFYDRKEVKDLLAYLRLLVNGRDEQALERVINEP----KRGIGSA 423 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + L+ +NE+G+ + L G Sbjct: 424 TVEKLKMLLNETGL--------------------SLHEALKAPSAG-------------- 449 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 E G V ++LL L + E+ + + L +A L +E Sbjct: 450 ---ELLGRSLLKVTAFSTLLESLRKETDTVPVEQLMTDILEK-TGYWDALLLEGSEQARG 505 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + + I E + + L + + L + + V + TL + Sbjct: 506 RMDNLDELKRIAMEFQEDENEEEKTLEDFLNHV--ALVSDIDDAKLSRDAVTLMTLHSAK 563 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F VV + GM +G++P Q + D + +++R L + A++KL+ Sbjct: 564 GLEFPVVFMAGMEEGLFPSQRS------------LDDTDKLEEERRLCYVGITRAKKKLF 611 Query: 729 ISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 ++ + PS ++E+ ++ ++ + + + + R Sbjct: 612 LTSCRSRMMYGRTVMFPPSRFLEEIPRHLIETALVGQQDGSGAQRAAWENRPQEEGSGLR 671 Query: 787 MPFDPQNYQPGERQSYAREWLP 808 + +R+ E++P Sbjct: 672 SIARRRGASILDRRDRRSEYVP 693 >UniRef50_A4XKK0 ATP-dependent DNA helicase PcrA n=2 Tax=Clostridia RepID=A4XKK0_CALS8 Length = 714 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 60/469 (12%), Positives = 145/469 (30%), Gaps = 69/469 (14%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPL--DPLDSSI 374 + + F +V PD + ++ + + + A I+ KR + I Sbjct: 256 ADVRNILEFENVFPDAKVIKLEKNYRSTKTILSAANEVIKNNRNRKPKRLWTDNNEGEKI 315 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + E + + +++ + P +I ++ F +A + Sbjct: 316 YLYPAFDEVDEANFVSMSIKNLIQ--GGIKPSEIGILYRTNAQSLN-----FENALSSHS 368 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +PY + ++ I+ L L + + + +++VP + I + ++ Sbjct: 369 IPYKVVGSLRFYERKEIKDIIAYLRLITNPDDNLSLFRVINVP----KRGIGPSTVEKIK 424 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 +E GI + E Sbjct: 425 VLSDEYGISAYRLLKERGDFEFD------------------------------------- 447 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 L ++ L R + +E V L ++ E + Sbjct: 448 ---RRTYAKLYDFILLLESMRTEAESKSVVEVIELVLDKTKYMESLLSSKNEEDFQRAKN 504 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 Q I A + + + L + + +++ + V + T+ + + F+V Sbjct: 505 IEQLISAAAMFEEENEDKSLQNFLNSITLSFEEDDGQKE---DKVMLMTVHAAKGLEFEV 561 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V L G+ +G++P + +L ++ +++R L A+ A++ L ++Y Sbjct: 562 VFLTGLEEGLFPLLRSEGEIEL---------QNELEEERRLCYVAITRAKRFLVLTYANN 612 Query: 735 SIQDNS--ERFPSVLVQELI-DYIGQSHYLPGDEALNCDESEARVKAHL 780 R S + E+ YI Q + + +S + + + Sbjct: 613 RRVFGRFSSRQKSSFIDEIPIKYIQQIYTPLSITKSSGAQSISNTEDGI 661 >UniRef50_Q0AZZ6 ATP-dependent DNA helicase PcrA n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZZ6_SYNWW Length = 696 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 62/467 (13%), Positives = 132/467 (28%), Gaps = 70/467 (14%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLDSSITF 376 + F+ PD+ L ++ + N + A I + K+ Sbjct: 256 AEPYNIKRFLGDYPDSRLIKLEMNYRSSGNILSAANAVICNNEEREEKQLYTQKGQGEKL 315 Query: 377 --HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 +E + D + +L +D V A R Sbjct: 316 VHFCAGDSFQEARFIADEINQLL-RSENRHFQDFAVFYRTHAQ-----SRALEEALLYRN 369 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +PY I R ++ ++ L L + +++VP R I E+ L ++ Sbjct: 370 IPYHIVGARKFYERKEIKDILAYLRLVSNNNDLLSFERVINVP----RRGIGEKTLGRIK 425 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + E GI + + Sbjct: 426 AYSEERGI---------------------------------------SLLDVLAEAESIP 446 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 G+ +++ + L + L E L ++ + Sbjct: 447 GIGRKMLTAMEDFYGMLKYLTDLVTSGASLMELLEQVIEVTGYIEELKKSKATDAEARIE 506 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 Q + + + + L + A + + + + V + TL + + F V Sbjct: 507 NLQELRSLVVEFEREGGQGLEEFLSQTALVQESDELD---NSDHVLLMTLHGAKGLEFPV 563 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V + G+ +GV+P + +++R L + AQ++LY+S+ Sbjct: 564 VFITGLEEGVFPSYRSQT-------------AEEMEEERRLCYVGITRAQERLYLSHALS 610 Query: 735 SIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 + ER PS + E+ + + S + + A Sbjct: 611 RLLYGYERSNPPSRFLYEIPEELLLSPQQKKVAKPVFQAGDRVLHAK 657 >UniRef50_A7VTM6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTM6_9CLOT Length = 740 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 73/572 (12%), Positives = 161/572 (28%), Gaps = 103/572 (18%) Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKL 306 Y +++ + + + +N + D QD + Sbjct: 180 YQKRLREADAMDFDDLLGNTVELFRQCPDVLEYYQNRFRYIMVDEYQDTNQ--------V 231 Query: 307 GRDYIYLLSDLESS-------------------QELDAFVDVTPDNLLHNIQSDIL---E 344 +++ LL++ + + + +F P+ + ++ + Sbjct: 232 QYEFVRLLAEKSKNLCVVGDDDQSIYKFRGATIENIMSFEKSYPNAKVIRLEQNYRSTKN 291 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 + N A A ++ E + +P I H + Q E + +L + Sbjct: 292 ILNAANAVISNNEERKGKTLWTENPEGDKIQIHTSSNEQDEAGFVATTILEQVA--KGRK 349 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 D V+ ++S S ++ VF +PY I + I+ LS+ ++ Sbjct: 350 YSDFAVLYR-MNSQSNILEKVF----VKSGIPYRIIGGHRFYERREIRDMIAYLSVINNP 404 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + +++ P + I ++ + + G Sbjct: 405 SDEIRLRRIVNQP----KRSIGDKTIATASEIAGALG----------------------- 437 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER-P 583 + + + DE L V L + + E Sbjct: 438 ----------------ESLLEVLGRADEFDSLRRASV-KLKAFYDMMQELIDANDDESVS 480 Query: 584 LEEWLPVCRD---MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 L E + + + A E E + I + ++ + LS +E Sbjct: 481 LHELYELILEKTGYIEALRGEKEEAETRIENINELASNLLKFQEENG--EEATLSAFLEE 538 Query: 641 LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 ++ D + A V + T+ + + F VV L G +G++P A Sbjct: 539 VSLMTDIDNYD--ETADTVVMMTMHSAKGLEFPVVFLPGFEEGIFPGLQA---------- 586 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQS 758 D + ++R L A+ A++ LY+ + S PS E+ + Sbjct: 587 --IYDPNEIQEERRLCYVAITRAKESLYLLNADSRMLFGSTSRNRPSRFSLEIPLDLINK 644 Query: 759 HYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 + + L Sbjct: 645 TREQDWRKPDLGTKMPVAETELRRKSATAAMH 676 >UniRef50_C0VSX9 ATP-dependent DNA helicase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VSX9_9CORY Length = 735 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 57/468 (12%), Positives = 133/468 (28%), Gaps = 73/468 (15%) Query: 321 QELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLDSSITF--H 377 + + F P+ ++ + +N + A I K + + Sbjct: 260 RNIREFERDFPNATTILLEQNYRSTQNILSAANAVISHNEHRGKKNLWTDQGAGPKIIGY 319 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 V + E + + +D L ++ VM V +PY Sbjct: 320 VADREEDEARFIASTI-----DDRNLPYNEVAVMYRT-----NAASRVIEDVFIRTGIPY 369 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 + + I+ L + D+ + +++ P R I ++ L ++ + Sbjct: 370 RVVGGTRFYERKEVRDIIAYLRVVDNPDDEVSLRRIVNTP----RRGIGDKALAFVTAFA 425 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 + I ++++ DE L Sbjct: 426 SRENI---------------------------------------SLYEAMRHVDEVDYLG 446 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP-DAETEAAMTLIEQQW 616 A +A + + R G + L + + D EA + + + Sbjct: 447 ARGRNAIAKFVAMMEELRAGTQEVGDLINLITDVSGYRDELEKSKDPRDEARLDNLNELV 506 Query: 617 QAIIAEGLGAQY-GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 A+ + + + ++ D ++I G V + TL + + F V Sbjct: 507 AYARDFAQQARANDEDDSVQAFLERVSLVADADQIPD-AGQGVVTLMTLHTAKGLEFPYV 565 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 L G +G +P + G+ +++R L + A+++L+IS Sbjct: 566 FLPGWEEGQFPHMRS------------LGNTEEIEEERRLAYVGITRARKQLFISRALLR 613 Query: 736 IQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 I + + S + ++ + + + S Sbjct: 614 IAWGNPQTNPESRFLGDIPSSLIEWEREEPAYGVGGGYSSYGGNDGWI 661 >UniRef50_Q9CD72 ATP-dependent DNA helicase pcrA n=26 Tax=Actinomycetales RepID=PCRA_MYCLE Length = 778 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 68/457 (14%), Positives = 147/457 (32%), Gaps = 47/457 (10%) Query: 323 LDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLDSS--ITFHVC 379 ++ F PD ++ + +N + A I +KR I +V Sbjct: 291 IEDFERDYPDTTTILLEQNYRSTQNILSAANSVIARNFGRRDKRLWTDAGKGELIVGYVS 350 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 + E + + D + A++ +T D+ V+ + + +PY + Sbjct: 351 DNEHDEAKFIADEIDALVGGGE-ITYDDVAVLYR-----ANNLSRSLEEVFIPTGIPYKV 404 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 + I+ L + D+ + + +L+ P R I + + + Sbjct: 405 VGGFCFYESKEIRDLIAYLRVLDNPGDAVSMRRILNTP----RRGIGDRAEACVSVYAEN 460 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 +G + V E ++P + + V D+ + + Sbjct: 461 TGTSFADALQAVAEGKVPMLNTRSVKA----------------IAGFVALLDDLRCRVDD 504 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 +G L +++ + + R L +E + D LN E Sbjct: 505 DLGELVESVLERSGYLRELESSTDPQELARL--DNLNELVSFAHEFSTEQANA-AALAKS 561 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 + D L+ ++++ D ++I + +G V + TL + + F VV + G Sbjct: 562 LHTPEDEDVPDTGALAAFLEKVSLMSDTDQIPEN-NSGVVTLMTLHAAKGLEFPVVFVTG 620 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 DG+ P GD + ++R L + A+Q+LY+S Sbjct: 621 WEDGMLPHMRT------------LGDPTELSEERRLAYVGITRARQRLYLSRAITRSSWG 668 Query: 740 SE--RFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 S ++E+ + ++ + S A Sbjct: 669 QPILNPESRFLREIPPELIDWRRSILTDSYSTPASGA 705 >UniRef50_C8WP33 UvrD/REP helicase n=3 Tax=Coriobacteriaceae RepID=C8WP33_EGGLE Length = 813 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 72/588 (12%), Positives = 169/588 (28%), Gaps = 59/588 (10%) Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD---VGNPLLASWGKLGRDYIYLLS 315 + +QR E ++ + ++G ++ VG+ + + G D +L Sbjct: 206 RSAYQQRFRYIMVDEYQDTNHAQYSITGLLAEGHKNIMVVGDDDQSIYSWRGADLRNIL- 264 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSIT 375 E + L + + A A + + ++ I Sbjct: 265 ------EFEQDYPTAHTVKLEQNYRSVGNVLAAANAVIANNQHRKAKKLFTSAEDGDKIQ 318 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 ++ + E + + + L+ + V + + Sbjct: 319 VYMAADERDEGRWIAGEIEK--QRAAGLSYNQVAVFYRTNAQ-----SRMLEDMLLRAGV 371 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY I + ++ L+L + +++VP R I + + + Q Sbjct: 372 PYRIVGGTRFFDRAEIRDVMAYLTLVVNPADDIAAKRVINVP----RRGIGKTTIERIEQ 427 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM--LLGYAMESAQGEWQSVLPYDES 553 + E G+ + + + + + R + L+ A + + + Sbjct: 428 FAREMGMTFMEGAELA---IVDPELRASARQAIGEFVGLVNEARTYGGDLRKVIETIIDK 484 Query: 554 SGLIAEL-VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 SGLI L + ++ + L E D L + A+ + Sbjct: 485 SGLIGALQAENTDEARGRIENIQEFLGVVDEFTETHED-EDALYEAPTAEPADAPALAPV 543 Query: 613 EQQWQAIIAEGLGAQYGDAV---------------PLSLLRDELAQRLDQERISQRFLAG 657 A+ + + L+ + + R D + ++ Sbjct: 544 PSSADALAGSFYAFAGANELAAPAEESPVRVLRGDSLADFIEWVRLRTDLDTVA--EDGH 601 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V + T+ + + F V + GM + ++P + GD + +++R L Sbjct: 602 AVTMMTVHSSKGLEFDCVFVAGMEETLFPHMNS------------VGDAAGIEEERRLAY 649 Query: 718 EALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 A+ A++KL+++ S +QE+ + Q+ L + Sbjct: 650 VAITRARKKLFLTCAYARQIFGQTSSNPISRFIQEIPSELRQTTGLGSAGFSGTGWEKRG 709 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 + + T + S R AA G + Sbjct: 710 SRKGIAGSGTEAGGGRVFGRSSASGSSGRSDERAARVGGSYVRPGAEK 757 >UniRef50_Q038V6 ATP-dependent helicase/deoxyribonuclease subunit B n=8 Tax=Lactobacillus RepID=ADDB_LACC3 Length = 1179 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 102/729 (13%), Positives = 195/729 (26%), Gaps = 98/729 (13%) Query: 307 GRDYIYLLSD---LESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 GR Y L ++ LD F P + + L + N+ Sbjct: 256 GRLYHRLYQKAKTMKVPIRLDRFAKPRP------LSEGMKHLADWWQTSTNL-----QPQ 304 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 + + V P E+ + ++ + + RD +++ +D Y+ I Sbjct: 305 APAQTAQNKEVELAVATDPYHELRTVARQIYQAVRQ--GARYRDFLILARRLDPYAAVIP 362 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA-R 482 A+F +P R + HP++ SL ++ D + +DV+ LL +L Sbjct: 363 AIFEEF----NIPQFTDLERPMKDHPLVVLIESLFAIQDHDYQYQDVMRLLHTELLLPEN 418 Query: 483 FDIT--EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 DI + L + +GI + L A Sbjct: 419 MDIAAFRDALDTTDNHLVRTGITGKKRWTQTDPWRYFQRNPNADDSQLD--------PEA 470 Query: 541 QGEWQSVLPYDESSGLIAELVGHL------ASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 Q + + +L+ L W + L W Sbjct: 471 DKTAQINAIKTLVADTVPQLLRQWQTAKTGREAAASLYQWLQTTGVIDQLNVWRQTANA- 529 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 D A + ++ + R+ LA +Q Sbjct: 530 -----DGDLSRSQANEQAWDTFTQLLNDYATILGEADFNRDQFRELLAAGFASATYTQIP 584 Query: 655 LA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 V I +R K V ++G + P G ++ ++ DDR Sbjct: 585 STLDSVVISETGLVRLAKAKHVYVIGATNTAMPDVPNDSGVLNSEERQLLA--AQLPDDR 642 Query: 714 YL--------------FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 +L ++A +KL +SY ++ Q+NSE S ++L + + Sbjct: 643 FLPEQGPTTTLGDPFINYLGFMAASEKLTLSYPMQNTQENSENQASPYFRQLAQALQLTP 702 Query: 760 YLPGDEALNCDESE----------ARVKAHLTCLHTRMPFDPQN------YQPGERQSYA 803 L V+A H ++P + A Sbjct: 703 ATWAPAGLGTSLKAVLGSQRAMLSDFVRAAGEAQHQKLPLSRSWQGVLASLKQTTLAPLA 762 Query: 804 REWLPAASQAGKAHSEFVQPLPFTLPE--TVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 ++ + + V + L+ ++ + F + L + R E Sbjct: 763 QKLAGSLTYQNDPGRLDPTLAVQLYGRDMNVSVSRLETYYRNQFEYFLKYGLLLQPRPEF 822 Query: 862 SEIP-DTEPFILEGLSRY--QINQQ--LLNALVEQDDAERLFRRFRAAGDLP-------- 908 P DT L +Y Q+ L + D A + A P Sbjct: 823 ELSPADTGSLFHAVLDQYLTQLRDAGQTLADVTAADVAAAVPPLVAAITKRPGYEILGST 882 Query: 909 --YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLR 966 Q + + + + M +L + G + Sbjct: 883 HRMAYLTSRLSRLLIQVLTNMRQQQRRTGF--RPMRTELQFGRI---GDTRGLPGLSWPL 937 Query: 967 WRPSLLSVA 975 ++V Sbjct: 938 PHGGRVNVR 946 >UniRef50_A5GQG6 UvrD/REP helicase n=18 Tax=Cyanobacteria RepID=A5GQG6_SYNR3 Length = 784 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 84/567 (14%), Positives = 151/567 (26%), Gaps = 78/567 (13%) Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWG 304 R YW + + R + L +N VG+ + + Sbjct: 241 RSYWHRRFRHVLVDEYQDTNRTQYDLIKLLVTGGQDPQLYNEWNGRSVFVVGDADQSIYS 300 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK 364 D+ L+ + + A L + A A + Sbjct: 301 FRAADFTILMGFQQDFGDQAADDATRTMVKLEENYRSTATILEAANALIANNSERIDKVL 360 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 RP I+ C E E + R+ + P L+ + V+ Sbjct: 361 RPTRGEGELISLTRCDDEIAEAEAVVHRMRMLDAAHPELSWGSMAVLYRTNAQ-----SR 415 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 + +PY + ++ ++ L L + S +L +++VP R Sbjct: 416 AIEESLVRWRIPYVVVGGLRFYDRREIKDVLAYLRLLINPADSVSLLRVINVP----RRG 471 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 I + ++ L N+ I W Sbjct: 472 IGKTTIQRLNDAANQLAI---------------------------------------PLW 492 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR--DMLNAFFLPD 602 V + L L +N R P E V L Sbjct: 493 DVVSDGEAVRSLGGRSAKGLLQFCELINGLREQAQVAPPSELIQQVLEKSGYLRELITEA 552 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNIC 662 + Q+ + L + L + S+ A V + Sbjct: 553 TDEAEERRRNLQELVNAALQYQEENEEG--DLEGFLA--SAALASDADSKDTAADRVTLM 608 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 TL + + F VVCL+G+ G++P D + +++R L + Sbjct: 609 TLHSSKGLEFPVVCLVGLEQGLFPS------------YRSLDDPASLEEERRLCYVGITR 656 Query: 723 AQQKLYISYIGRSIQDN---SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 A+++L++S+ PS+ + EL + + Q + S Sbjct: 657 AKERLFLSHASERRLWGGMREPAVPSIFLAELPEALVQG---------DIPRSGGAALRR 707 Query: 780 LTCLHTRMPFDPQNYQPGERQSYAREW 806 L D QP R S AR W Sbjct: 708 EQRLERLTRVDRAEAQPKARVSAARSW 734 >UniRef50_A4XBE9 ATP-dependent DNA helicase PcrA n=18 Tax=Actinomycetales RepID=A4XBE9_SALTO Length = 795 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 82/599 (13%), Positives = 165/599 (27%), Gaps = 84/599 (14%) Query: 234 IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ 293 +HLL ++P + + + + L ++ + + Sbjct: 222 TTVHLLQSHP-----HVAETYRRRFRHVLVDEYQDTNHAQYVLIKELVSGTDGLDPAELC 276 Query: 294 DVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 VG+ + + G +L E + LL + N A A + Sbjct: 277 VVGDADQSIYAFRGATIRNIL-------EFERDFTDARTILLEQNYRSTQTILNAANAVI 329 Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA 413 + + I +V + E + + + ++++ T P D+ V Sbjct: 330 DRNTSRKPKRLWSEAGTGDPIVGYVADTEHTEADWVAREIDRLVDDGDT-RPGDVAVFYR 388 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 VF LPY + + ++ L + + + + Sbjct: 389 TNAQ-----SRVFEEVFIRVGLPYKVVGGVRFYERKEVRDALAYLRALVNEDDTVSLRRV 443 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 L+ P R I + + + I +G L R Sbjct: 444 LNTP----RRGIGDRAEACVEALASRDRISFG--------------------AALRR--- 476 Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP---LEEWLPV 590 ++ G+ +A + L+ R P LE L Sbjct: 477 ----------------ARDAPGISTRAANGIAEFVALLDGVREVAETSAPEEVLEALLNR 520 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY----GDAVPLSLLRDELAQRLD 646 + D + + +++ + G+ ++ +++A D Sbjct: 521 SGYLTELEESLDPQDAGRVDNLQELVSVAREYTERVEGLGEEGERATVAGFLEQVALVAD 580 Query: 647 QERISQRFLAGP--VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 +++ V + TL + + F VV L GM DGV+P G Sbjct: 581 ADQLPADDPEHQGVVTLMTLHTAKGLEFPVVFLTGMEDGVFPHART------------FG 628 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLP 762 D +++R L + A+Q+LY+S + PS ++EL + + Sbjct: 629 DNHELEEERRLAYVGITRARQRLYLSRAVTRSAWGQPAYNAPSRFLEELPAELVRWERTE 688 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFV 821 G P+ Q R L AS+ A Sbjct: 689 GSYTSWAGGGGGVGGRADRGQGGFTGGTPKAAQLARRLGVDGSRLATASELPSAPPRVA 747 >UniRef50_Q83GZ5 ATP-dependent DNA helicase n=2 Tax=Tropheryma whipplei RepID=Q83GZ5_TROWT Length = 743 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 67/568 (11%), Positives = 164/568 (28%), Gaps = 88/568 (15%) Query: 234 IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ 293 I + Y + + E + Sbjct: 206 ISETVFLLQKSPE-----ISAMYRNRWKYLLVDEYQDTNHAQYRLILELTKGDKSDMSLT 260 Query: 294 DVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAG 352 VG+ + + G D +++ F + PD ++ + +N A Sbjct: 261 AVGDSDQSIYAFRGADIANIVN----------FENDFPDCHTILLEQNYRSCQNILLAAN 310 Query: 353 VNIEEFSRSDNKRPLDP--LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV 410 I +K + + S + E + DR+ ++++ +L DI V Sbjct: 311 ALISNNQNRKDKNLWSELGAGEKVIAYCASSAEEEGRFVADRVRHLVDQGESL--SDIAV 368 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 V + + +PY + ++ ++ L++ + + + Sbjct: 369 FYRSNTQ-----SRVIEESLIRQSIPYRVVGGTKFYERAEIKDILAYLTVIVNPDDTLAL 423 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 +L+VP + + L ++ + GI T L+R Sbjct: 424 RRILNVP----KRGVGTVSENRLVEFASARGI--------------------TLMQALSR 459 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR-RGLAQERPLEEWLP 589 + + + L L LN + + L++ L Sbjct: 460 I--------------------DEINIQPSAKSALRDLFYLLNRFAGSSMPANELLDDLLK 499 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 D+L+ F D A + + + + G + +A ++ Sbjct: 500 A-TDLLSRFNNTDDPQNEARKINIGDFVDSVEDFAKENPGGTLS--DFMTNIALMTSYDQ 556 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 G + + TL + + F V L G+ +G+ P +++ +++ Sbjct: 557 SDDAP--GQITLMTLHMAKGLEFDFVFLTGLEEGILPHEMS------------LKEKNGI 602 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQD-NSERFPSVLVQELIDYIGQSHYLPGDEALN 768 +++R L + A++ L++S+ + + R PS E+ ++ + H + Sbjct: 603 EEERRLAYVGMTRAKKVLHLSFSSYRKRYTDGVRLPSRFWDEIPQHLLRWHSRFTHKRFT 662 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQP 796 + + + + Sbjct: 663 GPLYGFTARPAGESRQSVHVLKNRYPRE 690 >UniRef50_C4V2E0 ATP-dependent DNA helicase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2E0_9FIRM Length = 746 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 67/551 (12%), Positives = 157/551 (28%), Gaps = 78/551 (14%) Query: 250 DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD---VGNPLLASWGKL 306 ++ ++ +++ E ++ A + ++ VG+ + +G Sbjct: 196 ELLTKNEELRMKYQKKFQYILVDEYQDTNGAQYAITKLLAAEHRNICVVGDADQSIYGWR 255 Query: 307 GRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDN 363 G D +++ F P+ + ++ + +N A + E + Sbjct: 256 GADMRNIMN----------FEQDYPEATVILLEQNYRSTKNILAAANAVIENNLTRKKKE 305 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 +P IT + + + E + + L + DI V+ Sbjct: 306 LWTDNPTGDRITIYEGATEKNEASYIVREV-ERLHTMFHVKYGDIAVLYRTNAQSRNI-- 362 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 A +PYA+ ++ I+ L + + + +L +++VP R Sbjct: 363 ---EEAFYATGVPYAMVGSVRFYDRREIKDIIAYLRVIYNPRDTLSLLRIINVP----RR 415 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 + + + + E I Sbjct: 416 GLGPTSIARMMETAEEYRISLF------------------------------------EV 439 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 L A++ L + + L RP+ E + + + Sbjct: 440 ITDAQLLSMIPKLSAKVKVALEEFAAMVFTFMGQLGT-RPIHEIVEDVIETSGYAAALEE 498 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP-VNIC 662 E + + + I+ G + L D LAQ + Q + V + Sbjct: 499 EKKEDNRDRLENLREFISVAKNFDDGAEEGENGLADFLAQIALISDVDQTEQSDGTVTLM 558 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 T + + F V + GM +G++P D + +++R + Sbjct: 559 TFHAAKGLEFPAVFMAGMEEGLFPHSRT------------LLDDTEIEEERRTCYVGITR 606 Query: 723 AQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 A+++LY++Y + PS + E+ + + + + Sbjct: 607 AERRLYLTYARQRTIYGRTEMSRPSRFLAEIPEELVEHKEADFFGGADLRAPSNIWSERS 666 Query: 781 TCLHTRMPFDP 791 T + P Sbjct: 667 TRTQRKRYIAP 677 >UniRef50_C5NYN7 ATP-dependent helicase PcrA n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYN7_9BACL Length = 727 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 48/472 (10%), Positives = 154/472 (32%), Gaps = 70/472 (14%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSP 382 F D L + + A + + + + I+ + + Sbjct: 265 FEKDFDDVELVFLDQNYRSNSTILDAANAVIKNNTDRKEKELWSENKGGGKISVYAASND 324 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + E + + ++L + + + +DI ++ + ++ ++ +PY + Sbjct: 325 KDETDDIAKKILEL--KKEGIDYKDIAILYR-----ANYLSRQMENSCLSFGIPYKLIGS 377 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + ++ L++ +R + +++VP + + + + ++ + GI Sbjct: 378 LKFLQRQEVRDLLAYLNVIVNRADEFSLRRIINVP----KRGVGASSMDKIDKYAEQYGI 433 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 + L + E+ G+ ++V Sbjct: 434 --------------------SLFEALKNI--------------------EAIGVSKKIVT 453 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 ++ L + + + ++E + + + + +++ Sbjct: 454 NIKLLTNLIEKYSEV--ERYAIDELIIGIYKDSGYETMLKESNDPYAESRIENISELVSS 511 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + L E++ D + +Q V + T+ + + +KVV ++G+ + Sbjct: 512 AKQFSSMND-SLIDFISEMSLTSDSDDENQE---DAVVLSTVHASKGLEYKVVFIMGLEE 567 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--S 740 ++P ++++ +++R L A+ A+++L++SY R +Q Sbjct: 568 NLFPSIRDAES--------SADEKNKMEEERRLAYVAITRAKERLFMSYANRRMQFGSIK 619 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ 792 S + E+ + + G + D + + ++ L ++ + Sbjct: 620 MNKRSRFLDEVPNKLMHFESSFGGSFESTDSNIEQANKFISKLSPKIKISEK 671 >UniRef50_C3QGR5 ATP-dependent DNA helicase n=23 Tax=Bacteroidales RepID=C3QGR5_9BACE Length = 792 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 62/599 (10%), Positives = 167/599 (27%), Gaps = 81/599 (13%) Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKL 306 YW + + + + ++ D QD + +L Sbjct: 185 YWDRCRQAGAMDFDDLLVYTYILFRDFPDVLTRYQDQFHYVLVDEYQDTNYAQHSIILQL 244 Query: 307 GRDYIYLLSDLESSQELDAFV-----------DVTPDNLLHNIQSDILELENRAVAGVNI 355 ++ + + +Q + +F + P+ + ++ + + A ++ Sbjct: 245 TKENQRICVVGDDAQSIYSFRGADIDNILYFTKIYPNTKVFKLEQNYRSTQTIVCAANSL 304 Query: 356 EEFSRSDNKRPL---DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 E + ++ + I +S E +++ +++ + + + ++ Sbjct: 305 IEKNERQIRKAVFSEKEKGEPIGVFQAYSDVEEGDIVANKIAEL-RREYHYGYAEFAILY 363 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 +F A R +PY I + ++ I+ L + E Sbjct: 364 RTNAQ-----SRIFEEALRKRSMPYKIYGGLSFYQRKEIKDVIAYFRLVVNPNDEEAFKR 418 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIR-WGIDDDNVRELELPATGQHTWRFGLTRM 531 +++ P I + + + G+ W + + G H G + Sbjct: 419 IINYPA----RGIGDTTVGKIISAATNHGVSLWAAVCEPLSYGLDINKGTHAKLQGFREL 474 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 + G+ + A E I G + + Sbjct: 475 IEGFIADQAD------KNAYEIGTDIIRQSGIINDVCQ---------------------- 506 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIA--EGLGAQYGDAVPLSLLRDELAQRLDQER 649 E + IE+ + + V L+ E+ L + Sbjct: 507 --------DTSPENLSRKENIEELVNGMNDFCALRQEEGNPNVSLTDFLSEI-ALLTDQD 557 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 + V + T+ + + FK V ++G+ + ++P + Sbjct: 558 SDKADDGEKVTLMTVHSAKGLEFKNVFVVGLEENLFPSGMVGDS------------PRAL 605 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEAL 767 +++R LF A+ A++ Y+S+ + PS ++++ + + G Sbjct: 606 EEERRLFYVAITRAEEHCYLSFAKTRFRYGKMEFGSPSRFLRDIDVDYLRLPHEAGVSRA 665 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 + + + + S + P A + ++ + Sbjct: 666 VDEGAGRFRREIEGGFARSTSPSRAPF---GSNSSEQRERPKAQIIAPSVPRNLKKVSA 721 >UniRef50_Q03D70 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Pediococcus RepID=ADDB_PEDPA Length = 1192 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 93/746 (12%), Positives = 210/746 (28%), Gaps = 125/746 (16%) Query: 337 NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 + SD+L+LE + + +T +S EVE + + Sbjct: 288 RVNSDLLKLEKYWIESSEGQVGGSKQENNAC------VTIFQANSRYAEVEHVATLIRQK 341 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + +DP+L D V+ + YS I+ +F LP + A + HP+LE + Sbjct: 342 MAKDPSLKFSDFSVLTRHLSDYSTIIKPIFDQM----ELPIFYDLQIAMKDHPLLELINA 397 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL------RQWVNESGIRWGIDDDN 510 L + F EDV+ LL +L + G+ + +V + GI +G Sbjct: 398 LFDIRAHHFRYEDVMRLLKTGLLFPETEDDPHGMDFFKSVHITENYVLKQGI-YGDRWLQ 456 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 ++ + ++ + + + + + + + Q Sbjct: 457 KKDWKYSRFND---------------IDEEKQTDEEIEINQRINTVKNYVAETVVPFFNQ 501 Query: 571 LNIWRRGLAQERPLEEWL------PVCRDMLNAFFLPDA-ETEAAMTLIEQQWQAIIAEG 623 L+ G+ + L ++L + + A + + ++ E Sbjct: 502 LSTATTGVEAAKALYDFLIKNGIDQCLLAWRDQWIEEGRLAKAAEPEQTWETFIQMLDEF 561 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMND 682 + L + SQ + + ++ + K+V ++G D Sbjct: 562 VDILGDQPFDPDNFMGLLNAGFEGATYSQIPSTLDQILVSESGMVQMVDRKIVFIIGATD 621 Query: 683 GVYPRQLAP------------LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 V P Q+ F Q + + + + YL + +L S Sbjct: 622 RVMPEQIQDNDFLNQDGKNQIDPFLDDDQFLRISNDRQMRQEPYLNYLTFMIGSDELIFS 681 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL---------- 780 Y +S D E S V+ + + G L Sbjct: 682 YP-KSGNDGVELKISPYVERIGKHFGIIAQSLPSRPTTEPVRLDPPFIELFIGSNRSTLS 740 Query: 781 -------TCLHTRMPFDPQN------YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT 827 + DP+ + S + L + + + Sbjct: 741 HLIQYARAMHEAKSEADPRWNLIYTILRQSTLGSLTDQLLSSLEYKNIPEKLKPEIVEGL 800 Query: 828 LPETV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILEGLSR------- 877 +T+ + L+ F+ + F + L++ R P DT + + + Sbjct: 801 YGDTIYASVSKLEEFYRNEYSYFLKYGLKLQERETSDLSPADTGQYFHAAMDKLIKMITT 860 Query: 878 -------------YQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEM 924 QI ++L+ + + ++ G G + T + Sbjct: 861 ENLNFNEVNQEQIEQIAKRLVQQMEQDQQFDQF------NGTYRMGFLRKQLDRTVQAMV 914 Query: 925 QQLADRVIACRQPGQSME--------------IDLACN---GVQITGWLPQVQPDGLLRW 967 + + ++ R + E ++ + + G + ++ + Sbjct: 915 EAIFKQLARTRMRPIASEQLFGQIGSQSGLPALNFKVGEGKEINVRGKIDRIDKIEIGDK 974 Query: 968 RP---SLLSVAQGMQLWLEHLVYCAS 990 + + + A Sbjct: 975 DYLGIVDYKSSNRKFDFTDAYYGLAM 1000 >UniRef50_A9KP66 UvrD/REP helicase n=12 Tax=Bacteria RepID=A9KP66_CLOPH Length = 807 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 79/672 (11%), Positives = 195/672 (29%), Gaps = 98/672 (14%) Query: 170 KALVEYTHQLGQPRWHRANLYQRFI-ETLESATTCPPGLPSRVFICGISA-----LPPVY 223 + +E + + + I E L+ RVF+ IS+ + P Sbjct: 96 RRFIETLGYDRNFTIYDTDDQKTLIREVLKFLQIDTKQTKERVFLSAISSAKDEGISPEE 155 Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 + L ALG + ++ + +N + Y +K L + N Sbjct: 156 FE-LSALGDYNKMKI--SNVYKEYQRRLKTNNALDFDDLIMKTVELFQSNTEALNYYRNR 212 Query: 284 GQLFNSDGEQDVGN------PLLA-----------SWGKLGRDYIYLLS-DLESSQELDA 325 + D QD LLA + +G D + + + + Sbjct: 213 FRYIMVDEYQDTNTIQFKLIRLLAHSLNEYNEVEHNLCVVGDDDQSIYKFRGANIRNILD 272 Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSP 382 F PD ++ ++ + +N A + + + + ++F + Sbjct: 273 FEKEFPDAVVIKLEQNYRSTKNILNAANEVIHNNLGRKDKSLWTDNEDGEQVSFCQYDTD 332 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 E + D + L + ++ + ++ VF R +PY I Sbjct: 333 FAEATQVVDSI-KTLNDQDGISFNNFAILYRTNAQ-----SRVFEEKMIQRSVPYKIIGS 386 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 ++ ++ L D+ V +++VP + I L + Sbjct: 387 INFYQRKEIKDLLAYLKTIDNGLDGIAVKRIINVP----KRGIGLTTLDRVE-------- 434 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 +++++ + ++ + GL Sbjct: 435 -------------------------------EFSVKNNMSFYDALRHAENIPGLGRST-S 462 Query: 563 HLASLLMQLNIWRRGLAQER-PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 + S + + + L+ + L++ + + + + + +I Sbjct: 463 KITSFVSFIETIKSKLSSDTFTLKDLMEEILEGTGYLKELEEADDESAEDRIGNINELIN 522 Query: 622 EGL--GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 + + + + LS +E+ L + S + V + TL + + F V L G Sbjct: 523 KIVTYEVEATEPPTLSGFLEEV--ALVADIDSLEEDSNHVVLMTLHSAKGLEFPYVYLCG 580 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 M DG++P ++ + + + + A +++++S + + Sbjct: 581 MEDGIFPSYMSINAENPELEIEEERRL---------CYVGITRAMKQIHLSAARQRMMRG 631 Query: 740 SER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG 797 + PS + E+ Y+ L D + + + + Sbjct: 632 ETQFNRPSRFINEIPRYLLTIQSAQNKGYLAKDSYGESPIRNASPNFSTQ--SRGMFDSD 689 Query: 798 ERQSYAREWLPA 809 + + Sbjct: 690 NPFDKSSSYNDT 701 >UniRef50_C0EHH2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHH2_9CLOT Length = 1119 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 103/802 (12%), Positives = 211/802 (26%), Gaps = 122/802 (15%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSS---ITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 ENR + R+ + ++P + + + + EV+ + + +++ Sbjct: 263 ENRLFVHPELAHLERNILRNRIEPYQGTCEHVKVLLAPNEYGEVDAVLSEVWELVQRH-G 321 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 R+I ++ D++SY Q V SA +PY + + + + P++ SLL+ D Sbjct: 322 YRFREIALITRDLESY----QGVLESALRKYGIPYFMDETVSVEHDPLIRFASSLLAAAD 377 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 VLALL + RF +T + Y ++ I +L P T Sbjct: 378 GGKDISPVLALLKCGLT--RFGLT--QISYFENYLYTWNI-------TKDQLNQPFTHNP 426 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 G A +V + L L Sbjct: 427 RGFVDRETEQDGQVTALADEVRAAVAEVISLLRGAEQTA---RGYGSALFEALHRLGVAD 483 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 L + + + I+ + + L R+ Sbjct: 484 VLNQRVERLN------GEEKFPEAEEQARLWDVLIDILEVLAHSTGEVRLTLRRYRELFD 537 Query: 643 QRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 + + V I + + V + G +G++P G S + Sbjct: 538 LSAKGYDLGSIPQSLDAVMIGSAERTIIGNSRAVFVFGAGEGIFPLSPQFDGVFTDSDRE 597 Query: 702 KRGDR---------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 + R ++R+ ++L S ++ L +S I S +PS ++ ++ Sbjct: 598 ELKKLGVELSKPIGDRILEERFSAYKSLSSPREHLVVSARLADIA-GSPLYPSEVITQIT 656 Query: 753 DYIGQSHYLPGDEA------LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW 806 G + + + ++ H + + + E Sbjct: 657 KMFGSGVVTYTADLGLADFCRTKESAFLQLAFHYRSRDGQAEALRRYFAQDEEYGDRLRR 716 Query: 807 LPAASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 L AA+Q G + + ++ ++ F ++ R Sbjct: 717 LDAAAQTGGFRLYDRKNAERLFGRQLAVSPTQVENYYKCGFLFFCANGMKAYPR------ 770 Query: 865 PDTEPFILEGLSRYQINQQLLNALVEQDDA--ERLFRRFRAAGDLPYGAFGE-------- 914 L LS ++ +L L+ +A L G + Sbjct: 771 ---GKANLNPLSLGKVTHHVLEQLLSTPSFYQMEYEEIAQAVEQLLDGYIDQFMGGKQDK 827 Query: 915 --IFWETQCQEMQQLADRVIACRQP-----GQSMEIDLACNG----------------VQ 951 F + + L + ++ Q +L V+ Sbjct: 828 TARFLQLYRNTARSLVELARNIQKEFAHCRFQPAAFELEIGDKGAVQPITLPLSDGCSVK 887 Query: 952 ITG---WLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRF 1008 + G + Q DG R A S ++ + Sbjct: 888 LIGEIDRVDSYQKDGKTYIRVVDYKSG-------------AGRTFDLSEIYYGLN----- 929 Query: 1009 PPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKAR 1068 L L L + +G + E+ A + A Sbjct: 930 --------LQMLLYLFSLWEQGKAK----FGETVPAGVLYLPAGGAFGSFGITKREGDAE 977 Query: 1069 TKFLQAYEGNMMVRGEGDDIWY 1090 + +G M D Sbjct: 978 DAAKEIQKGFRMNGLLLQDEEI 999 >UniRef50_D2RIV6 ATP-dependent DNA helicase PcrA n=6 Tax=Veillonellaceae RepID=D2RIV6_ACIFE Length = 750 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 64/484 (13%), Positives = 149/484 (30%), Gaps = 79/484 (16%) Query: 283 AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDI 342 + VG+ + +G G D +L F P + ++ + Sbjct: 233 KLLSAPENNLCAVGDIDQSIYGWRGADISNILD----------FEKDYPQARIFKLEQNY 282 Query: 343 LELE---NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 + + A + R N + I ++ + E E + ++ + + Sbjct: 283 RSTQVILDAANEVIKHNAARRPKNLWTENGNGQPIAYYQARDDREEAEFVVGQIRKL--Q 340 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 D+ ++ +F + +PY + ++ +S L Sbjct: 341 REGTKLGDMAILYRTNAQ-----SRMFEENLINNGVPYVMVGSLKFYDRKEVKDTLSYLR 395 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + + + +++ P + I + +R + +SG+ T Sbjct: 396 FLSNERDIQGLERIINEP----KRGIGAATVAKVRTLLEDSGM----------------T 435 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 + R LLG A + + ++ +L + L Sbjct: 436 LPEVLQTVQARELLGRAFPK---------------------IQAFSDMIQELARVKDTLP 474 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA-VPLSLLR 638 + +E+ L L A L ++ + ++ I E + L Sbjct: 475 VKDLMEQVLEK-SGYLEALRLEGSDQSKSRLDNLNEFLRIADEFAKDPGEENNKTLEDFL 533 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 + +A D + V + TL + + F VV + GM DG++P Q + D + Sbjct: 534 NHVALVADIDDAKL--TQDSVTLMTLHSAKGLEFPVVFIGGMEDGLFPSQRSLEDEDKLE 591 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIG 756 ++ R L + A+++LY++ + PS ++E+ + Sbjct: 592 EE------------RRLCYVGITRAKKRLYLTNCRSRMVYGHVVMYPPSRFLEEIPRNLI 639 Query: 757 QSHY 760 ++ Sbjct: 640 ENVA 643 >UniRef50_B2GM51 ATP-dependent DNA helicase UvrD1 n=10 Tax=Actinomycetales RepID=B2GM51_KOCRD Length = 818 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 71/556 (12%), Positives = 151/556 (27%), Gaps = 93/556 (16%) Query: 236 IHLL--FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ 293 +H+ F YY + T +++ + Sbjct: 230 VHMFRAFPQVLEYYRRRFRHVLVDEYQDTNHAQYALVRELVGGDSPGHTDESGIPPAELT 289 Query: 294 DVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 VG+ + + G D + + + +L + + A A + Sbjct: 290 VVGDSDQSIYAFRGADIRNI-------TDFERDFPAARTIMLEQNYRSTQNILSAANAVI 342 Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA 413 + R + + I + + E + + + L+++ + P D+ V Sbjct: 343 SQNADRRDKKLWTAEGDGAPIVGYAAENEHEEARFIAEEI-DRLQDEHGIRPGDVAVFYR 401 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 LPY + ++ +S L + V + Sbjct: 402 TNAQSRSL-----EEILMRVGLPYKVVGGTRFYERKEIKDAMSYLRAIANPADDITVRRI 456 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 ++ P + I + + + GI ++ + R+ Sbjct: 457 VNEP----KRGIGDRAQGSIAALADREGI--------------------SFSEAMHRLDE 492 Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD 593 + A + A L+ L +G + LE L Sbjct: 493 A----------------PGLATRSANAIRTFAQLMDDLGELAQGASVTAVLEAVLEQ-SG 535 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 L A + + + A++ E + L + +A D ++I R Sbjct: 536 YLEALRTSTDPQDESRVENLAELVAVVREFEKDR--PEAGLGEFLEHVALVADADQIPSR 593 Query: 654 FLA---------------------GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 G V + TL + + F VV L GM G++P Q + Sbjct: 594 PDTAAEGTASAQQIAQEVEEARDQGVVTLMTLHTAKGLEFPVVFLTGMEHGIFPHQRS-- 651 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQE 750 D S +++R L + A+Q+LYI+ + S + E Sbjct: 652 ----------FADPSSMEEERRLAYVGITRARQRLYITRAESRSLWGQSQFNPASPFLDE 701 Query: 751 LIDYIGQSHYLPGDEA 766 + ++ + Sbjct: 702 IPAHLIDWKREGAAAS 717 >UniRef50_D0BN23 ATP-dependent DNA helicase PcrA n=5 Tax=Firmicutes RepID=D0BN23_9LACT Length = 755 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 61/467 (13%), Positives = 144/467 (30%), Gaps = 76/467 (16%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGV 353 VG+ + +G G D +L F + + ++ + + A Sbjct: 238 VGDADQSIYGWRGADMSNILE----------FEKDYQNAKVVLLEQNYRSTKTILQAANH 287 Query: 354 NIEEFSRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 IE K+ + IT++ S Q E + ++ ++L + D ++ Sbjct: 288 VIENNFNRKVKKLWTENEEGQPITYYRAQSEQDEGRYVLSQIQSLLRD--GYHYDDFAIL 345 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 V +P+ + + ++ ++ L L + Sbjct: 346 YRTNAQ-----SRVMEENLLKSNIPFRLVGGQRFFERLEIKDLLAYLRLIVNPQDDLSFR 400 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +++ P + I L L + + Q + +++ Sbjct: 401 RIVNSP----KRGIGATSLDKLNDFASMH--------------------QFSLLEASSQI 436 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 SG A+ + A ++ L + L+ +E+ + Sbjct: 437 -----------------AISPLSGKAAKALEKFAEMIEDLRKMQEFLSISEFVEQVIEK- 478 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ-RLDQERI 650 L A A Q++ ++ + + + S L L L + Sbjct: 479 TGYLAALEQQHTMEADARIENIQEFISVAKQFEQDRLEEESEDSPLLQFLTDLSLVSDAD 538 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 S V + TL + + F VV ++G+ +G++P + + + Sbjct: 539 SDDGDGRMVTLMTLHAAKGLEFPVVFIIGLEEGIFPSLRSI-----------MENGDDVE 587 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYI 755 ++R L + A+QKL+++ + + PS + E+ + + Sbjct: 588 EERRLAYVGITRAEQKLFLTNAYSRLLYGRTQTNRPSRFLLEIGEDL 634 >UniRef50_A5TXQ2 Superfamily I ATP-dependent helicase n=15 Tax=Fusobacterium RepID=A5TXQ2_FUSNP Length = 737 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 62/482 (12%), Positives = 153/482 (31%), Gaps = 84/482 (17%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE---LENRAVAGVNIE 356 + +G G + + +L+ F + + + ++ + + + A + Sbjct: 247 QSIYGFRGANILNILN----------FENNYNNAKIVKLEENYRSTTTILDAANELIKNN 296 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + S+ + I C + + EV + + + + RD+ ++ Sbjct: 297 KSSKDKKLWTQNGKGDLIKVLACDNGRDEVSRIIEFIRE--NHQNGVPYRDMTILYRTNA 354 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 +F +P+ + + S ++ I+ LS+ + ++ +++V Sbjct: 355 Q-----SRIFEEGLLRYNIPHKVFGGISFYSRAEIKDIIAYLSIIVNPQDELNLQRIINV 409 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + + E+G+ + + E Sbjct: 410 P----KRKVGEKGIEKIIAYARE------------------------------------- 428 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 + +++ E SGL A L + + + LA + D ++ Sbjct: 429 --NDLNLLEALSHIKEISGLTAVGKEKLLEMYDIIKEL-KDLAYTETASYIVQTLIDKIH 485 Query: 597 --AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 + + + A +++ I E + L+ + L Sbjct: 486 YIDYINENYDDAEARIENIDEFKNSILELENVVGE--LRLNEYLE--NVSLISATDDLEE 541 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 + V + T+ + + F +V L+G + ++P A D +++R Sbjct: 542 KSDYVKLMTIHNSKGLEFPIVFLVGFENEIFPGTRA------------MLDEKEMEEERR 589 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDES 772 L AL A++KLY+S+ +R PSV ++E+ + + D S Sbjct: 590 LCYVALTRAEKKLYLSHATIRFVYGQDRLSTPSVFLKEIPEKLLDIEVKKERLYFADDYS 649 Query: 773 EA 774 + Sbjct: 650 DE 651 >UniRef50_C7QGW9 ATP-dependent DNA helicase PcrA n=8 Tax=Bacteria RepID=C7QGW9_CATAD Length = 806 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 75/525 (14%), Positives = 148/525 (28%), Gaps = 77/525 (14%) Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLE 318 +L+ + + VG+ + + G ++ Sbjct: 286 QLVKELVGQHEKRTVDGDLVRPGLNTEDLPPAELCVVGDADQSIYAFRGATIRNIIE--- 342 Query: 319 SSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSIT 375 F PD + ++ + + A + E R+ N IT Sbjct: 343 -------FERDYPDAKVIKLEQNYRSTQTILTAANAVIENNKGRRAKNLWTDSGDGKLIT 395 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 +V E + + + + L + T + V VF L Sbjct: 396 GYVADDEHSEAQFVAEEI-DRLSDAKETTYGGVAVFYRTNAQ-----SRVFEEVFVRVGL 449 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY + + ++ L + V +L+ P + I E+ L + Sbjct: 450 PYRVVGGVRFYERKEVRDALAYLRALANEDDIVSVRRVLNTP----KRGIGEKAEESLER 505 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 I +G ++ DE+ G Sbjct: 506 LSARERITFG---------------------------------------DALRRADEAPG 526 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 L A V + ++ R A+ P + L D++ T IE Sbjct: 527 LAARSVKAVQGFTQMMDELREMAAEYGPAHVLEAILERTGLLQELQDSDDPQDETRIENL 586 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP-VNICTLMPMRSIPFKV 674 + + Q L + +A D ++I V + TL + + F V Sbjct: 587 RELLAVALEFEQGQPEGRLPEFLERVALVADSDQIPDGEDHEGMVTLMTLHSAKGLEFPV 646 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V L GM DGV+P + GD+ +++R L + A+++LY+S Sbjct: 647 VFLTGMEDGVFPHMRS------------MGDKKEMEEERRLAYVGITRAREQLYVSRSVY 694 Query: 735 SIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 + + PS + E+ + + + + + Sbjct: 695 RSAWGAPQYNPPSKFLGEIPEPLVEWERTAPEPKTGERSPFGDRR 739 >UniRef50_D0LJZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJZ3_HALO1 Length = 787 Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 59/487 (12%), Positives = 133/487 (27%), Gaps = 68/487 (13%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILE---LENRAVAGVNIEEFSRSDNKRPLDPLDSSI 374 + L F PD + ++ + + + A A + SI Sbjct: 251 AEPRNLLEFKRDYPDAEVVKLEQNYRSTSVILDAANAVIAKNRNRHEKALWTASDGGESI 310 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + C S + E + + ++ D+ ++ Sbjct: 311 LWEPCPSDREEATFIARAIRGLVSA-ENRDFSDMAILYRTRAQ-----SRQLEEQLRRFD 364 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 + Y I + ++ IS L L +++VP I + + +R Sbjct: 365 IHYEIIGDVSFFQRREVKDIISYLRLLVQPNADLAFERIVNVPA----RGIGKTTVERVR 420 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + + +++ + S Sbjct: 421 DYARRA---------------------------------------ELPLFEAARACADGS 441 Query: 555 G--LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 G L A L + L ++ R +A + E + + E Sbjct: 442 GGSLAARARNKLRAFLDIVDGLRDVMAAGASVAEIVIQTVERSGYSAALTKEGTLEAEER 501 Query: 613 EQQWQAIIAEGLGAQYG--DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 + +++ G + L +A + ++ G V + T+ + + Sbjct: 502 LKNLSELVSWGSSFDEEEGEDASLVEFLANVALQSSGDKAESG-DRGKVKMMTIHAAKGL 560 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 F VV L G+ +G++P + D +++ L A+ A+++L ++ Sbjct: 561 EFPVVFLCGLEEGLFPSLRERDD---------QNDGDTLEEEYRLAYVAITRARERLVLT 611 Query: 731 YIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP 788 Y + + R PS + + D P A + Sbjct: 612 YAMQRMIWGETRSQRPSRFLDSIPDDCLAVRAEPPPPATTTHYDDYGSTLRRRRRPAADE 671 Query: 789 FDPQNYQ 795 +D + Y Sbjct: 672 YDQRVYS 678 >UniRef50_C7N6W8 DNA/RNA helicase, superfamily I n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6W8_SLAHD Length = 772 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 63/551 (11%), Positives = 152/551 (27%), Gaps = 63/551 (11%) Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKL 306 Y +K + + ++ + D QD + A L Sbjct: 175 YQERLKMANAFDFDDLLMYTYLLFKNHPDVLEAYQDRFRYLLVDEYQDTNHAQYAITKLL 234 Query: 307 GRDYIYLLSDLESSQELDA-----------FVDVTPDNLLHNIQSDIL---ELENRAVAG 352 + ++ + Q + + F P ++ + + N A A Sbjct: 235 AAKHQNIMVVGDDDQSIYSWRGADIRNILEFEQDYPQARSIKLEQNYRSSGNILNAANAV 294 Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 V + I ++ + E + + + + ++ ++ V Sbjct: 295 VAHNTKRKQKRLFTESGDGEKILVYMASDERDEGRWIAGEIDKLH--NEGVSYEEMAVFY 352 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 +PY I + I+ L+L + Sbjct: 353 RTNAQSRSL-----EDMLLRAGVPYRIVGGTKFFDRAEIRDVIAYLTLCINPADDMAAKR 407 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 +++ P R I + + ++ S + + + L Sbjct: 408 VINQP----RRGIGKTTIEHIENVARNSNLTFMQAA----------------EWCLADET 447 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 L +A G + ++ +S G + + ++ + + L QER + Sbjct: 448 LQMRTRNAIGGFVGLINDAQSYGGE---LRKVIEAVIDRSQLIQALEQERT--DEAESRI 502 Query: 593 DMLNAFFLPDAETEAAMTLIEQQW-QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 + + F E + + E I + L + + RL + + Sbjct: 503 ENIKEFLSVVDEYVESHEIDESALPPEGINLLADTRQLSPDSLEDFLEWV--RLRTDLDA 560 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 V + T+ + + F V + GM + ++P + D ++ Sbjct: 561 ATDDDQFVTLMTVHSSKGLEFDCVFVAGMEETLFPHSNSSR------------DPQGLEE 608 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNC 769 +R L A+ A+++LY++ S V E+ + +S L Sbjct: 609 ERRLAYVAITRARKRLYLTCAYARQIFGETHANPVSRFVGEIPSELRKSAGLGSSGFAGT 668 Query: 770 DESEARVKAHL 780 + + + Sbjct: 669 GWEKRGSRRGI 679 >UniRef50_Q1PY53 Strongly similar to ATP-dependent DNA helicase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY53_9BACT Length = 729 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 58/474 (12%), Positives = 142/474 (29%), Gaps = 80/474 (16%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN---RAVA 351 G+P + +G G D ++ F PD + ++ + +N A + Sbjct: 241 TGDPDQSIYGWRGADLRNIMD----------FEKDYPDARVVLLEQNYRSTKNILLAASS 290 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + ++ + + I C + E E + + A+ + +I + Sbjct: 291 VIQKNKYRKQKEIWTENEHGEKIKTIHCENEHSEAEEIAKTIRAL--RGNGIKYTEIALF 348 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 A + +PY I ++ ++ + L + + Sbjct: 349 YRTNAQSRTL-----EIALRNAGIPYVIVGGVEFYRRKEIKDILAYIRLCVNPCDDSALE 403 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 ++ P I ++ +++W + + T + Sbjct: 404 RAINTPA----RGIGTTTVKKIKEWA--------------------ESRESTLFNAI--- 436 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 G ++ E +G A + L+M L + E+ L+ + Sbjct: 437 ----------GIVDAI---HEVTGKSAAAIKRFYELIMVLRHMPET-SVEKTLKSIIDK- 481 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 ++ + + ++ E L +E+A D + + Sbjct: 482 TGYIHFLRKSEEKESEDRIANVEELVNAAHEYDANHTDG--SLQGFLEEVALISDLDTVE 539 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 LA V + TL + + F VV + GM +G+ P + + + + ++ + Sbjct: 540 D--LAEAVTLMTLHTAKGLEFPVVFISGMEEGLLPHSESRISEEEIEEERR--------- 588 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPG 763 L + A ++L+++Y R ++ S + E+ Sbjct: 589 ---LCYVGITRAMKRLFLTYTKRRMRYGQLIPCVASRFLDEIHADCMDRLDKTE 639 >UniRef50_C2BHK2 Putative uncharacterized protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BHK2_9FIRM Length = 1115 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 91/761 (11%), Positives = 234/761 (30%), Gaps = 100/761 (13%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFH 377 S++ D F +++ L + V ++ + P + +I + Sbjct: 244 GSARTFDLFRQDFESEVIN------LPSNPKTVDLDHLRINFETYRPAPFEKNPENIKIY 297 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 S + EV + + +++ +P + +D+ V + D D Y + F +P Sbjct: 298 ESISTKSEVTNMALLINKIIKTNPDIRYKDMAVYLTDPDQYENELIKTFSRY----EIPI 353 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 + RR + +++ F++LL L + F ED+ +L+ ++ I+++ L ++ Sbjct: 354 FLDKRRKMADNHIIKTFLALLRLKVNNFRQEDLFYILNSKLI----GISDKDANALINFL 409 Query: 498 NESGIRWGIDDDNVR-ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 I+ + +++ ++ ++ + E + Sbjct: 410 TYRKIKGSMFENDKYFAMDEDFYEKNLVNDPKKDEKIAKKREEYDHVNLVRAKILHLTKG 469 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 + + + L ++ ++ + + + D + I ++ Sbjct: 470 LDKKNMTVKDLATKIFKMIADSDIKKSINAFQAKLLE------NADLDDYKENEQIWDEF 523 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVV 675 AI+ + + ++PLS + + +I + + + R K+ Sbjct: 524 VAILDQLVLLMGDRSLPLSRVVTIVEAVTRDIQIGLIPPSKDHLIVTDFARDRVSNKKIN 583 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRG---------DRSRRDDDRYLFLEALISAQQK 726 LLGM+D +P Q A + + + R + + + K Sbjct: 584 ILLGMDDAYFPSQKAKDYLISPDEMEELEKAKIDLKLYAKDRDRAELLSLYKIISR-SDK 642 Query: 727 LYISYIGRSIQDNSERFPSVLVQELIDYIGQSH--YLPGDEALNCDESEARVKAH-LTCL 783 L SY S ++ + S++++++ + L A + + +K + L L Sbjct: 643 LIFSYAL-SDKEGKDLNESLVIRDIRKIFPKLKKNILLDPRAEDAIFARESLKKYTLAVL 701 Query: 784 HTRMPFDPQNYQPGERQSYAREWLPAASQAGK------------AHSEFVQPLPFTLPET 831 + + + + + E+L + + ++ L L + Sbjct: 702 NKLANKEKITDKDKQIATAFMEYLRENQEKDENKLTYDKVKKGLFYTNDKLALADELRKV 761 Query: 832 V------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTE-PFILEGLSRYQINQQL 884 + + ++ + A P + F L+ PD E F ++ L I + Sbjct: 762 LYKKHAYSVSEIETYSACPYKHFIAYGLR----------PDVEKEFDVDALDIGNIVHKS 811 Query: 885 LN---ALVEQDDAER--------LFRRFRAAGDL-----------PYGAFGEIFWETQCQ 922 L++ D + L G + + + Sbjct: 812 FEDLSRLIKDMDLDEVDFSEIDKLLDEKFNEGIDENLDSTRKDSPKNKYILKNINQAAKR 871 Query: 923 EMQQLADRVIACRQPGQSMEIDLACNGV----------QITGWLPQVQPDGLLRWRPSLL 972 +Q+ D++ + E G + G + ++ G R Sbjct: 872 NTRQIVDQLKRGDFKLEYFEQAFDKGGFFDPVYVDEENYLRGRIDRIDMAGN-LVRVIDY 930 Query: 973 SVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAA 1013 + + + + D + P+ A Sbjct: 931 KTGS--KAFNLAAILNGKDLQLIIYMIAVSDDKKNLEPIGA 969 >UniRef50_C2CV85 Possible ATP-dependent DNA helicase n=2 Tax=Bifidobacteriaceae RepID=C2CV85_GARVA Length = 964 Score = 222 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 65/517 (12%), Positives = 136/517 (26%), Gaps = 77/517 (14%) Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLL 314 LA + D + + D + A G R+ Sbjct: 347 RELAGVDDAGVDDYSTDSTVSSVSPDSTQLPQSSITVVGDSDQSIYAFRGADIRNIQDFE 406 Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSI 374 D S+ + + IL+ N ++ + S I Sbjct: 407 QDFPSATTIMLEQNYRST-------QTILDAANAVISNNA---NRKPKKLWTSLGKGSPI 456 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 +V + Q E + + + + + DI +M A Sbjct: 457 VGYVADNAQGEASWVAQEIARL-AGEDGVNYSDIAIMYRANSQSRSL-----EDALIKSG 510 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 LPY + ++ ++ L + ++ +L+VP + + + Sbjct: 511 LPYQLVGGTKFYERREVKDALAYLQSIANPDDDVNMRRILNVP----KRGLGARAESQIT 566 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + E+ I + + E Sbjct: 567 SYAKENSISF------------------------------------WSALSQIDKIAEQI 590 Query: 555 GLIAELVGHLASLLMQLNIWRRGL----AQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 G+ + L S + + ++ + E + +L + Sbjct: 591 GISSRTFNALKSFRDLMTSLIDFMKANDSKPSKVVENVLNESGLLQDLRESKDPQDEFRV 650 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS-QRFLAGPVNICTLMPMRS 669 Q Q++ AE V + + A D +++ Q G V + TL + Sbjct: 651 DNLSQLQSVAAEYEQNTPDANV--AGFLETTALVADSDQLPDQGEDTGKVTLMTLHTAKG 708 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + + VV L GM G +P + ++R L + A++ LY+ Sbjct: 709 LEYPVVFLTGMEQGTFPHSRCVDN------------QKELCEERRLAYVGITRAKKILYV 756 Query: 730 SYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGD 764 ++ Q E S + E+ + D Sbjct: 757 TWAAERSQWGKSAEMIQSQFLDEIPADLISWKRKEAD 793 >UniRef50_B2RKD8 ATP-dependent DNA helicase n=5 Tax=Bacteroidetes RepID=B2RKD8_PORG3 Length = 765 Score = 222 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 57/453 (12%), Positives = 136/453 (30%), Gaps = 68/453 (15%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLDPLDSSI 374 + + F P + L ++ + + N A + + E + I Sbjct: 264 AKVENILGFSKSFPGSKLFKLEENYRSTQSIVNAANSLIAYNEGRIPKQVFSNKQVGERI 323 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 C S E + D ++ ++ D ++ VF A Sbjct: 324 RLTGCLSGYLEAYTVADSIVERRMQEY-CPYSDFAILYRTNAQ-----SRVFEEALRKHN 377 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P+ I + S ++ ++ L + E + +++ P + I + L L Sbjct: 378 IPFRIYGGLSFYSRKEIKDVLAYFRLIVNPNDDEALRRVINYP----KRGIGDTTLSRLN 433 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + S + L+ G+ + S Sbjct: 434 EIATAS--------------------SRSLWDVLSESQKGF---------------PDLS 458 Query: 555 GLIAELVGHLASLLMQL--NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 +G SL+ +L + + Q + + + ++ + + + + + Sbjct: 459 ATARRRLGEFVSLIRELQESEYESLYEQAADVVKRSGISAEIFSDKSIEGISRQENLKEL 518 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 + + L +E+ DQ+ V + T+ + + F Sbjct: 519 LNGIEEYGTSYAEERGEKP-SLGTFLNEVVLLTDQDTEGVV--GDYVTLMTVHAAKGLEF 575 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 K + ++GM + ++P + +++R LF A+ A++ +IS+ Sbjct: 576 KHIFIVGMEENLFPSMMN-------------ATEQGLEEERRLFYVAITRAKESCHISFA 622 Query: 733 GRSIQDNSE--RFPSVLVQELIDYIGQSHYLPG 763 ++ PS +QEL D + Sbjct: 623 AERSRNGRTERSRPSRFLQELDDAYVERRVPQE 655 >UniRef50_C1A3F5 ATP-dependent DNA helicase UvrD1 n=31 Tax=Bacteria RepID=C1A3F5_RHOE4 Length = 830 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 81/604 (13%), Positives = 171/604 (28%), Gaps = 50/604 (8%) Query: 171 ALVEYTHQLGQPRWHRANLYQRFI---ETLESATTCPPGLPSRVF-ICGISAL---PPVY 223 L H +NL + E + +A P LP + + G Sbjct: 157 ELDTKRFSARLLATHISNLKNELVGPEEAVVAADQDPAELPRLIAKVYGHYQQRLRAANA 216 Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 L +G+ + + F YY ++ + H+ L + + Sbjct: 217 LDFDDLIGETVALLQAFPQIAEYYRRR---FRHVLVDEYQDTNHAQYMLVRELVGGAGES 273 Query: 284 GQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL 343 VG+ + + G I + + E LL Sbjct: 274 DHAVAPAELCVVGDADQSIYAFRGA-TIRNIEEFERDY------PDARTILLEQNYRSTQ 326 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 + + A + ++ R I +V + E + + ++++ T Sbjct: 327 NILSAANSVISKNTGRREKRLWTDSGEGELIVGYVADNEHDEASFVASEIDRLVDQGET- 385 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 DI V +S +PY + + ++ L + + Sbjct: 386 KFADIAVFYRTNNS-----SRALEEIFIRLGVPYKVVGGVRFYERKEVRDIVAYLRVLAN 440 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 + + +L+ P R I + + I + + E ++ + Sbjct: 441 EDDTVSLRRILNTP----RRGIGDRAEACVAVHSEHRNISFAAALRDGAEGKVALLNTRS 496 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + + M DE +G +A +++ +R LA Sbjct: 497 QKA----IASFLEMMDGLRALLPTPAADEDEPFELGDIGEVAEAVLERTGYRAELAASSD 552 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW--QAIIAEGLGAQYGDAVPLSLLRDEL 641 ++ + D LN E + + D L+ + + Sbjct: 553 PQDGARL--DNLNELVSVAREFSSDARNAAGLIDPDDEETAAMREGEPDPGSLAAFLERV 610 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 + D +++ G V + TL + + F VV + G DG +P A Sbjct: 611 SLVADADQLPDS-DDGVVTMMTLHTAKGLEFPVVFVTGWEDGQFPHMRA----------- 658 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQSH 759 GD + ++R L + A+Q+LY++ S +QE+ + + Sbjct: 659 -LGDPAELSEERRLAYVGITRARQRLYLTRAIMRSAWGQPIQNPASRFIQEIPEDLINWR 717 Query: 760 YLPG 763 Sbjct: 718 REDP 721 >UniRef50_Q1Q1J4 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1J4_9BACT Length = 1099 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 141/1003 (14%), Positives = 305/1003 (30%), Gaps = 154/1003 (15%) Query: 167 PLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQA 226 L + + + +Y+R I L +PS I S++ + Sbjct: 68 LLAREICRNSKNDIGHIRQEPFIYERIITKLIEQERH--HIPSLKNIISPSSIARSMFHS 125 Query: 227 LQALGK---HIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 LQ L + + N DI+ + +++L T + +A Sbjct: 126 LQDLTDANVNADDLRAVINEQLTGGADIQKLSDISRLFTLFQNTLNASGISHDSNLYRSA 185 Query: 284 GQLFNSDGEQDVGNPLLAS----WGKLGRDYIY---------LLSDLESSQELDAFVDVT 330 + +LA + +D+ L + + + +V Sbjct: 186 AKHAADSEYLRKFKYILAYGFYDLTGVEQDFFSEIFRYYPTILFLPYKKNHAVFTYVKHF 245 Query: 331 PDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKR-------PLDPLDSSITFHVCHSPQ 383 ++ L I DI +L + G + + S+ K P P +++ Sbjct: 246 YESFLLGIARDIEDLPPDDLQGFSYLMDADSETKTSLHGESMPDAPSLDNLSIINVSGKH 305 Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 E+ V+ +L ++ + DI ++ ++ Y IQ VF +P+ D+ Sbjct: 306 DEIWVIAKEILKLI--NKGYVFGDIGIVARELGQYLNIIQEVFQE----NAIPFTTLDKE 359 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 + +P+ LL L F V+ +L+ P F+I L+ + + Sbjct: 360 PIEKYPLFTMIKQLLLLDRENFYRPMVIDILESPY----FNIPVPELKDV--------LS 407 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 D + +G W L ++ A + + + + + + Sbjct: 408 RQNLWDIISRTNGIHSGIRCWLSKLEQLKNAMAEPAEEDI------LPHNINISCDQIES 461 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET------EAAMTLIEQQWQ 617 L +++ L+ L ++ + + L+ + +E + + + E+ + Sbjct: 462 LKNIVQLLSNDLLSLQEKATWSQMCQKTKLFLDKYIHIPSEDIDQEIIKRDIFIKERIFC 521 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PVNICTLMPMRSIPFKVVC 676 + + + D QE I V + M R IPF+++ Sbjct: 522 LFDTLSILDRIDKEITYDQFADTFINACKQEGIQAGTANNKGVRVMNAMSARGIPFRILF 581 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGD------RSRR---DDDRYLFLEALISAQQKL 727 L+G+N+ +PR + F + + + +++R LF L +AQ+++ Sbjct: 582 LVGLNEKEFPRAIFEEPFLPDHTRRILSEALGNHIPEKLRGFEEERLLFYFLLNAAQERI 641 Query: 728 YISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE---------------- 771 Y+ Y RS + + PS + +++ I H D+ Sbjct: 642 YLLY-ERSDEAGKPKTPSHYIMDILQNIKGIHTRNEDKENKSPVKMNVPRSIKNKLCKED 700 Query: 772 ----SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS---------QAGKAHS 818 + + H P N G +Y R + S Sbjct: 701 ISLLTPNEAVIRMVLEH-IDPSCCINAIGGNLAAYTRSKSALQAIECFSPYLSAYDGIVS 759 Query: 819 EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRY 878 + + + L+ F A P + F + LQ+ E + E L L Sbjct: 760 DGEHWYKNRVQKGFNPTMLETFGACPFQFFMREILQLEPLEEPEK---GETISLPKL--G 814 Query: 879 QINQQLLN----------------------ALVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 I ++L+ + + E + + +PY E+ Sbjct: 815 TIYHEILDTLYCHLKEKGYFDGKAADTNPVEYLHKIANESFVKMGKQIP-IPYPLLWELK 873 Query: 917 WETQCQEMQQLADR-VIACR-------QPGQSMEIDLACNGVQ------ITGWLPQVQPD 962 + + + +++ L + G + ++ Sbjct: 874 KDEIVAALIHFLSWDIKQIEHTGYSPAFLEARLQLALPKGKFEDYPAIFFKGKIDRIDVK 933 Query: 963 GLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQ 1022 + L + + EHL+ A G P A +L Sbjct: 934 KSGQEIYFRLVDYKSGKAGTEHLLKAAVCGQKLQL------------PFYISMAEQFL-- 979 Query: 1023 LIEGYREGMSAPL-LVLPESGGAWLKTCYDAQNDAMLDDDSTL 1064 + YR+ +S P ++ E+ ++ C + +N +T+ Sbjct: 980 -VNTYRKEVSLPSEIIFDEASFVYIARCMNDENGERCLQKNTI 1021 Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 78/244 (31%), Gaps = 16/244 (6%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAA-N 59 ML + + LE + + +DP P ++V + M + LQ L +K ++ N Sbjct: 1 MLSIKFGHYHPSLENSFVETLHTIKSEDPLSPIAVIVPTNYMLERLQERLVKKHDVSFLN 60 Query: 60 IDFPLPASFIWDMFVRVLPEI--PKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD 117 + F ++ +I ++ F + + KL+ ER L++ ++ Sbjct: 61 VFFLNFYLLAREICRNSKNDIGHIRQEPFIYERIITKLIE-----QERHHIPSLKNIISP 115 Query: 118 DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTH 177 S R +F D V D A + + + L+ + Sbjct: 116 SSIARSMFHSLQDLTDA----NVNADDLRAVINEQLTGGADIQKLSDISRLFTLFQNTLN 171 Query: 178 QLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIH 237 G H +NLY+ + + + G L V + ++ Sbjct: 172 ASGIS--HDSNLYRSAAKHAADSEYLRKF--KYILAYGFYDLTGVEQDFFSEIFRYYPTI 227 Query: 238 LLFT 241 L Sbjct: 228 LFLP 231 >UniRef50_Q1WRR9 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Lactobacillus salivarius RepID=ADDB_LACS1 Length = 1193 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 109/926 (11%), Positives = 244/926 (26%), Gaps = 149/926 (16%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTG-------MAQWLQMTLSQKFGIAA--NIDFPL 64 ++ + + +DP +V + + +L+ + A N+ Sbjct: 15 RQVLLEQITNWQAEDPQAKIYYIVPNHNKFSAEVKVLDYLKSQ-QDNQDLFATSNVQTFS 73 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 W + + ++ + L + + L + + + + Sbjct: 74 FTRLAWYFMKDT--ATYQVNRITNAGLNMIVYRSLQEHSDE-----LTIFKGEQTQPGFI 126 Query: 125 FQLSSKAADLFDQYLVYRPDWLAQWETG------HLVEGLGEAQAWQAPLWKALVEYTHQ 178 QL S+ +L + Y D + + + L A +++ ++ T Sbjct: 127 AQLVSQLIELQQSCITY--DDIERMKENLSQQDTADSAELEAKLHDIAIIYRDFMQMTDS 184 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFIC-GISALPPVYLQALQALGKHIEIH 237 ++++ L + FI G S + L Sbjct: 185 KYLKPADILPSLTQYLQN--------EDLSNSYFIIEGFSQFTAQEQAIISVL------- 229 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 L R + + D E+ Sbjct: 230 -----------------------LQRAKEVRIDLILNRGVTDIEDLSDKQ---------- 256 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 S YLL ++ DV P Q +E +E Sbjct: 257 ----SLFYRSERTYYLLYQQARKAQVKILNDVYP-------QELRVETPELQSLAKYWKE 305 Query: 358 FSRSDNKRPLDPLD-SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + D ++ + E++ + R+ M+ D +++ D++ Sbjct: 306 STDLKPINVEKIGDNHNLQVIKADTRMTEIKEIATRIKQMVAL-KDYRYADFLLLTPDLN 364 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y I+ +F +P + + HP++E +L ++ + D++ LL Sbjct: 365 KYRNIIEPIFNDY----KVPIFVDLAKKMIDHPLVELLTALFNVKARHYRYVDMMRLLKT 420 Query: 477 PVLAAR-----FDIT--EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 +L + I + L + + G G + G + FG Sbjct: 421 ELLIPKTEYGYLGIKQFRQDLDLTENLILKFGFE-GSQWLRKDDWVYYRFG--SSDFGTQ 477 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 + + + + + + L + L W Sbjct: 478 TDVQEKITKQVNVIRRYIKEILPPFFKQLDEAENGKEAAQILMNFLIINGVPEQLINWRN 537 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 A D + + A++ E + + + L + Sbjct: 538 ------KALEQGDMVMADRPEQVWNLFCALMDEYVDTLGDLSFKEEDFLNLLQTGFEGAT 591 Query: 650 ISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 Q V I + KV + G D V P ++ L++ + + Sbjct: 592 YRQVPSTLDQVIISETTATQMNDRKVTFIFGATDLVMPNRIQNTM--LLTDMDRELVQGT 649 Query: 709 RDDDRYL--------------FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 DD++YL A ++ +++LY SY + ++ S V ++ Sbjct: 650 LDDEKYLSDTAEGRMAAEPFMNYLAFMTPKERLYFSYPVAGVNEDG-LRMSPYVNRIMKQ 708 Query: 755 IG-------QSHYLPGDEALNCDESEARVKAHLT--------CLHTRMPFDPQNYQPGER 799 L + L ++ ++L YQ + Sbjct: 709 FDLPLYEANGEPTLEDKKVLKFVATKRTALSNLIGVARQAKGQKQPLPVMWRYIYQKLQE 768 Query: 800 QSYAREWLPAASQAGKAHSEFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMR 852 + R + +S + L E + + + F+ + F + Sbjct: 769 DATYRRLTRKLMAGIE-YSNIPERLKTEYAEKLYGKTLNTSVSKFEEFFKNHYAFFLKYG 827 Query: 853 LQVNFRTEDSEIPD-TEPFILEGLSR 877 L++ R P T F L + Sbjct: 828 LKLKERDVFELSPANTGEFYHMALDK 853 >UniRef50_A0Q2Q4 ATP-dependent DNA helicase PcrA, putative n=23 Tax=Clostridium RepID=A0Q2Q4_CLONN Length = 760 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 60/468 (12%), Positives = 138/468 (29%), Gaps = 78/468 (16%) Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDN 363 G D +L F P+ + ++ + N A I+ S+ N Sbjct: 255 WRGADIKNILD----------FEKDYPEAKVVKLEENYRSKANILNAANTVIKHNSQRKN 304 Query: 364 K--RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 K R + I + +S E + + + ++++ + +D ++ Sbjct: 305 KVLRTQNENGEKIKIYRAYSDMDEGLFISNEIKRLIKK-ENRSYKDFAILYRTNAQ---- 359 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 VF R +PY I ++ + L ++ + +++VP Sbjct: 360 -SRVFEDVFMKRDIPYRIIGGLKFYDRKEIKDITAYLKFINNLQDDISLKRIINVP---- 414 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 + I + ++ + N Y E Sbjct: 415 KRAIGAATVSKIQDFAN------------------------------------YMDECMY 438 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 V S + SL+ + ++ ++E L M Sbjct: 439 SVLLDVENIPGLSKRSISSINKFTSLINGFTRTKDKVSVSNLIQEILESTGYMKELKDSN 498 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 + E + + I++ A + + LS +++ D + + Sbjct: 499 EIEDISRIENIKELVSAAVEF---ENTSEDKSLSAFLEKITLVSDVDNYD--EDTDTTVM 553 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 TL + + F VV ++GM +G++P + F + ++ R L + Sbjct: 554 MTLHSAKGLEFPVVFMVGMENGIFPGAQSLENF------------AEMEESRRLCYVGIT 601 Query: 722 SAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEAL 767 A+++LY++ S + E+ + + E+ Sbjct: 602 RAKEQLYMTSASTRKVFGRSVAYSESDFINEISPNLKEMVREGRTESA 649 >UniRef50_D1BXF2 ATP-dependent DNA helicase PcrA n=5 Tax=Actinomycetales RepID=D1BXF2_XYLCX Length = 896 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 62/463 (13%), Positives = 128/463 (27%), Gaps = 83/463 (17%) Query: 321 QELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLDSSITF--H 377 + + F D ++ + + + A I + KR + + Sbjct: 368 RNIQEFEQDYRDATTILLEQNYRSTQTILSAANAVISRNADRKPKRLWTAAGAGARIVGY 427 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 V +E + + + L + + P D+ + LPY Sbjct: 428 VADDEHQEARFVAEEI-DRLGDSDGVRPGDVAIFYRTNAQSRSL-----EEVLVRVGLPY 481 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 + ++ I+ L + ++ +L+VP + + E + Sbjct: 482 KVVGGTRFYERREIKDAIAYLRALANPDDDVNLRRVLNVP----KRGLGERAEALVAGLA 537 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 I +G L R ++ G+ Sbjct: 538 ERERISFG--------------------AALDR-------------------AEDVPGMS 558 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD---MLNAFFLPDAETEAAMTLIEQ 614 + L + R + P L D L D +A+ Sbjct: 559 TRTLNPLRGFRDLMRGLRALVEAGEPPAAILGAVLDRTGYLAELRASDDPQDASRVENLA 618 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP------------VNIC 662 + A+ E L + ++ D ++I +A V + Sbjct: 619 ELHAVATEFSQTDPEG--SLVDFLERVSLVADSDQIPDEDVADGEAEQEPKVDQGVVTLM 676 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 TL + + F VV L GM DG +P + D + ++R L + Sbjct: 677 TLHTAKGLEFPVVFLTGMEDGTFPHMRS------------LHDDAELAEERRLAYVGITR 724 Query: 723 AQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPG 763 A+++LY+S G +E PS + ++ + + Sbjct: 725 ARERLYLSRAGMRSAWGMSNEMPPSRFLTDVPEDLWDWRRKES 767 >UniRef50_D0JAI1 ATP-dependent DNA helicase n=2 Tax=Blattabacterium RepID=D0JAI1_BLASB Length = 709 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 61/562 (10%), Positives = 168/562 (29%), Gaps = 90/562 (16%) Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG-- 296 + Y L + + R +N + D QD Sbjct: 158 CLIKIYKSYIKRCLQAEALDFDDILLHTNHLFSHFPNVLRKYQNKFKYILIDEYQDTNLS 217 Query: 297 -NPLLASWGKLGRDYIYLLSDLESSQELDAFVD-----------VTPDNLLHNIQSDILE 344 N ++ S + L + +Q + AF + + ++ + Sbjct: 218 QNTIIKSLAFQ---HKNLFVVGDDAQSIYAFRGAKISNILNFHIDYKNAKVFRLEQNYRS 274 Query: 345 LENRAVAGVNIEEFSRS---DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 + A NI F+++ + + + S + E + + +++++ Sbjct: 275 THHIVQASNNIISFNKNQILKKIWTNNEKGEKVKIYSASSEKEEALYVASSIFSIIKKTK 334 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 +D ++ + + A ++ +PY I + + + ++ L + Sbjct: 335 -YHYKDFAILYR-----ANMQSNIIEYALKEKNIPYKIYGSISFEKRKEIRDLLAYLRII 388 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 + E +L +L ++ ++ + + I Sbjct: 389 VNSNDEESLLRILKKG--------NKKTIKSILDLSKKIRIT------------------ 422 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 +++ Y L + L +L+ + +R+ ++ Sbjct: 423 ------------------VYEIIKNIENYQHLLILNQKTKNKLKNLISTIEKFRKNTEKK 464 Query: 582 RPLEEWLPVCRDMLNAFFLPDAET--EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 + ++++N D + I ++E + + LS Sbjct: 465 DAFA----IAKEIVNFLLKEDPKNYKNENFQYILNNIFCYVSEQKKLKDNGEISLSGFLQ 520 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 +D++ V++ T+ + + F +V ++G+ + ++P + + Sbjct: 521 YFYLEIDEDMNHDENEENKVSLMTVHLSKGLEFSIVFIIGLEENLFPSKSSLDN------ 574 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQ 757 + + +++R LF AL AQ+K ++Y + PS + EL Sbjct: 575 ------QFKIEEERRLFYVALTRAQKKAVLTYARSRFLWGERKMTLPSRFINELNKNFID 628 Query: 758 SHYLPGDEALNCDESEARVKAH 779 +L+ + + + Sbjct: 629 RENQNSISSLSEKKEINSLVNN 650 >UniRef50_A1TNG2 ATP-dependent DNA helicase UvrD n=11 Tax=cellular organisms RepID=A1TNG2_ACIAC Length = 818 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 57/538 (10%), Positives = 157/538 (29%), Gaps = 47/538 (8%) Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS 302 P R ++ + + + +++ + D + A Sbjct: 229 PIRAHYQRRFQHILVDEFQDTNKLQYAWLKQIAGDVVDGRLVTHGSVLAVGDDDQSIYAF 288 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 G + + + + ++ + + +IL+ N ++ + Sbjct: 289 RGARVGNMQDFVREFDVRHQIKLEQNYRSYS-------NILDSANALISHNS---RRLGK 338 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 N R + + + E + + D + + + R+I V+ Sbjct: 339 NLRTTQGPGEPVRVYEAPTDLAEAQWMVDEIRQL-ARNDGFERREIAVLYRSNAQ----- 392 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 V SA + +PY + ++ ++ L L ++ + +++ P Sbjct: 393 SRVIESALFNAAVPYRVYGGLRFFERAEIKHALAYLRLLENPHDDTSFMRVVNFPP---- 448 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 I + L+ ++G + D + + M ++ +G Sbjct: 449 RGIGARTVEVLQDAARQAGC--SLHDAVSAVPGKAGANLGAFVAMVDVMREQTQGQTLRG 506 Query: 543 EW------QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 ++ + + A+ + +L L+ + R Sbjct: 507 IIGQMLESSGLVEHYRAEKEGADRLENLDELINAAESFVTQEGFGRDAVALPVDEHGASL 566 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 + ++ ++++ + PL+ L+ + Sbjct: 567 RQSPASQGIDPSLPVVDEPLPGGVD---ADTGETLSPLAAFLTH--AALEAGDNQAQAGQ 621 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 V + T+ + + F V + GM +G++P + + DR +++R L Sbjct: 622 DAVQLMTVHASKGLEFDAVFIGGMEEGLFPHENS------------MSDRDGLEEERRLM 669 Query: 717 LEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDES 772 A+ A+++LY+S+ + R+ S EL + + + Sbjct: 670 YVAITRARKRLYLSHSQTRLLHGQTRYNIKSRFFDELPEAALKWITPKQQGFGSFAPQ 727 >UniRef50_C4G2S8 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2S8_ABIDE Length = 768 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 90/715 (12%), Positives = 210/715 (29%), Gaps = 118/715 (16%) Query: 96 MTLLPQLLEREDFTLLRH-----YLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWE 150 M +L L + ++ L + L+ + A L +Y V + LA Sbjct: 1 MNILDNLNPEQKKAVVHENGPLLILAGAGSGKTRV-LTRRIAYLIKEYGVSPWNILALTF 59 Query: 151 TGHLVEGLGEAQAWQAP-----LW------------KALVEYTHQLGQPRWHRANLYQRF 193 T + E +W + ++ + + + Sbjct: 60 TNKAAREMRERVDELIEEGAENIWVSTFHSACVKMLRRFIDKIGYDRSFNIYDTDDTKAV 119 Query: 194 IET-LESATTCPPGLPSRVFICGISA-----LPPVYLQALQALGKHIEIHLLFTNPCRYY 247 ++ L++ P + + IS + G ++ + Y Sbjct: 120 VKQVLKALNIDNKEFPEKTCLNVISNAKNDFIDAEEFAVNSKFGVDNNVYARVYS---EY 176 Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN------PLLA 301 +K+ L + + + + D QD LLA Sbjct: 177 EKRMKNNNALDFDDILVKTVELFQTDKDTLEYYQRRFRYILVDEYQDTNIVQFKLLKLLA 236 Query: 302 SWGKLGRDYIYLLSDLESSQE------------LDAFVDVTPDNLLHNIQSDILELEN-R 348 ++ + L + + + F + P+ L+ ++ + N Sbjct: 237 NYVNEDGEIENNLCVVGDDDQSIYKFRGADIRNILNFEKIYPNALVIKLEENYRSTGNIL 296 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDS--SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 A I +KR + SI++ + +RE + + +L + E Sbjct: 297 EAANGVISNNKERKDKRLWTSKEGGASISYKTYDTGEREANGVANTVLRTVNEGK-AKYS 355 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 DI V+ +PY + S ++ ++ L ++ Sbjct: 356 DIAVLYRTNAQ-----SRAIEEKFIYSNIPYKLYGGTNFYSRKEIKDILAYLKTINNPKD 410 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 V +L+VP + I + + Sbjct: 411 DTQVRRILNVP----KRGIGSATEDKIADY------------------------------ 436 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV--GHLASLL-MQLNIWRRGLAQERP 583 A+E +++ + GL + + + ++ ++ + + Sbjct: 437 ---------ALEKEISFFEACMRVQSIPGLSRAVAKVEKFVAFIGAKIREFKDTVCMKAE 487 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 +E + + E + + IE+ + LG Q + L +++ Sbjct: 488 VEALIEEIGYIEELKLEGTDEAQGRIENIEELINKVAIFELGNQDAGDIKLGNFLADVSL 547 Query: 644 RLDQE-RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 D + + S+ A V + TL + + FK+V ++GM +G++P ++ D + + Sbjct: 548 ATDADNKDSENKDADKVTLMTLHSAKGLEFKIVFIVGMEEGLFPSRMCLFAMDESELEEE 607 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYI 755 R + A +KLY+S + + PS + E+ +++ Sbjct: 608 RRL----------CYVGITRAMEKLYLSNAASRMLRGDVQWNAPSRFIGEIPEHL 652 >UniRef50_D0BK92 Exonuclease RexB n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BK92_9LACT Length = 1189 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 116/925 (12%), Positives = 272/925 (29%), Gaps = 153/925 (16%) Query: 80 IPKESAFNKQSMSWKLMT---LL--PQLLEREDFTLLRHYLTDDSDKRKLF-------QL 127 + K ++ + ++W + L P L + +L+ L++ D+ LF Sbjct: 67 VTKMQVYSFKRLAWYFLRDHAALQRPSLSKVGICMILQKILSEYQDELVLFNKESRHKGF 126 Query: 128 SSKAADLFDQYLVYRPDWLA--QWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWH 185 + + + ++ + + W E + + ++K ++Y Q Sbjct: 127 IERLSAVMQEFRLGGIEIEDFSGWFEQDSYEEIDQRLKEFGIIYKHYLDYLKQDFVQS-- 184 Query: 186 RANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCR 245 + ++ L + + V I L + L+ + AL K +T Sbjct: 185 -----EDLLKILAQEISLKDLSNTYVVIDQSYHLNAMELEVIDALVKSCGGVEFYTTAT- 238 Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGK 305 D P + R L E+ L + E +P Sbjct: 239 ---TDAFKPKEKLESSLFDSNRQLVSRLLNWLMIDESKPVLKELNEENCAYHP------- 288 Query: 306 LGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKR 365 D LELE + E S + R Sbjct: 289 -----------------------------------DFLELEQYWLETSGGLETSSNRTSR 313 Query: 366 PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV 425 ++ + + ++E++ + +++ +DI ++ +++ +Q + Sbjct: 314 KIED----LQWTTYEDERQEIQETLATIKTLVDSGK-YRYQDIQILSRNLEEQQTLLQPL 368 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV-----PVLA 480 + +PY + + HP+++ ++ ++ + +++ LL P+ Sbjct: 369 LETY----QIPYFMDLSDTMEHHPLIQVLDAIFAIQKHFWRYHNIMNLLRSEYCFWPLNR 424 Query: 481 ARFDITEEGLRYLRQWVNESGIRW-------------GIDDDNVRELELPATGQHTWRFG 527 A + + LR + + G D + + Sbjct: 425 ANLENKHDEEVTLRDALIHYRQKLDETETIILAQGYEGKDWISRKTWNYQVENIDEDSLS 484 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 +L+ + AQ + ++ E + V + L + W Sbjct: 485 SREVLVHQQLTQAQELREQIVSLLEPFYKKLDKVETTKEAITLLYQLLEKIGVTEAFLYW 544 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 ++ D +T + ++ ++ E + + + + L + Sbjct: 545 RNHAANI------GDIQTARRQDQVWNEFLKLLEEYVYIFGDEPFDWEIFQLLLHTGFEH 598 Query: 648 ERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR 706 + + + +R P KV +G++ GV PR G LM+ + + Sbjct: 599 THYNMAPSTLDQLTCTGIDSVRYSPKKVTFAIGLSQGVLPRMEEESG--LMTDEEREYLL 656 Query: 707 SRRDD--------------DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 S+ D + +LF + L SA +KLY+S ++ S V+ ++ Sbjct: 657 SKLDSGRFLHPTTIQKQSVEPFLFYKVLTSATEKLYLSMHHTD--KGAKLKSSSFVERIL 714 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 + + + E V H + E LP + Sbjct: 715 NQYEITTQDGNQKQQERFEQGEFVTIHELFTTLLQKLRQYKFSKEEDIPSIWIALPHLLR 774 Query: 813 AGKAHS-------------EFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMR 852 K + LP L + ++ F+ P F Q Sbjct: 775 QDKDFQQEYHTLVDSVFHLNIAKQLPKELAAELYGNHLYLSTSQVETFYKDPFSHFLQYG 834 Query: 853 LQVNFRTEDSEIPD-TEPFILEGLSRY-------QINQQLLNALVEQDDAERLFR----- 899 L V R E + + E ++ +++ + ++A + + +F Sbjct: 835 LNVRERREFELTAAGSGEYFHETFDQFIRKVHELKLDIRAIDAATTEKVLKEIFDSMNDD 894 Query: 900 -RFRAAGDLPYGAFGEIFWETQCQE 923 RF+ P + ++ + ++ Sbjct: 895 ARFQILNATPRMNWTKVLLQDTIRQ 919 >UniRef50_B8FP41 ATP-dependent DNA helicase PcrA n=10 Tax=Firmicutes RepID=B8FP41_DESHD Length = 755 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 69/557 (12%), Positives = 153/557 (27%), Gaps = 99/557 (17%) Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP---LLASW 303 Y + L + ++ + D QD + L+ Sbjct: 175 YLKKLLANNALDFDDIIMLTVRLFRENPEVLSQYQDKFRYILVDEYQDTNHAQYALVNLL 234 Query: 304 GKLGRDY---------IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 K R+ IY+ + LD D L Q+ A Sbjct: 235 AKKYRNLCVVGDDDQSIYMFRGADVQNILDFERDYPEAKTLKLEQNYRSTKSILQAANSV 294 Query: 355 IEEFSRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 ++ + K + I ++V + E + +R+ +L + V+ Sbjct: 295 VQNNTERKEKSLWTENEDGQPIVYYVADNEHDEARYMGERIQRLLNV-EGRKFNEFAVLY 353 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 V +PY I ++ ++ L + + Sbjct: 354 RTNAQ-----SRVIEERFMKEGIPYRIFSGLKFYERMEIKDILAYLRILHNPADQVSFSR 408 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 +L+VP + + E L + Sbjct: 409 VLNVP----KRGLGESTLEKI--------------------------------------- 425 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 L YA E +++ D L + L + + R A E + + + Sbjct: 426 LDYANEQEMPVLDAIMEADYIPELQSRAKKPLLAFAHLMQELRALAAAESSVTKLVEEVL 485 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP------------------L 634 + ++ + + ++ + A+Y + L Sbjct: 486 KRTGYWDNLVSDKSPEAEARLENLREFLS--VTAEYDEKADNYETAVVQEGIEDALVPGL 543 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 + ++++ + + Q V + T+ + + F VV L GM +G++P + Sbjct: 544 TGFLEQVSLVAQIDSLDQ--ADDAVVMMTIHSAKGLEFPVVFLGGMEEGIFPSSRS---- 597 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELI 752 D ++R L A+ A+++LY++Y + + + PS QE+ Sbjct: 598 --------MLDPVLLAEERRLCYVAITRARERLYLAYAQQRMLYGRTQYNRPSEFFQEIP 649 Query: 753 DYIGQSHYLPGDEALNC 769 ++ Sbjct: 650 THVLVDRDPIDPPPTRA 666 >UniRef50_Q8EUN0 ATP-dependent DNA helicase n=1 Tax=Mycoplasma penetrans RepID=Q8EUN0_MYCPE Length = 738 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 74/564 (13%), Positives = 171/564 (30%), Gaps = 80/564 (14%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGK--- 305 G++ D L K R + D + +++ +Q LL+ K Sbjct: 196 GNLLDFDDLIKYARRVLEIEEIRTKWQNRFDYILVDEFQDTNYDQYQIIKLLSKNFKNIF 255 Query: 306 LGRDYIYLLSDLESSQE--LDAFVDVTPDNLLHNIQSDIL---ELENRAVAGVNIEEFSR 360 D ++ +QE + F D+L ++ + + N A + + + Sbjct: 256 AVGDPDQMIYSWRGAQENIFEVFKKDFSDSLTIVLEKNYRSTKNILNIANSLIQKNKNRI 315 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 N +S I + E + + R+ ++ + +DI ++ + Sbjct: 316 KKNLYTDSSTESEIIYFEADDQNLESKFVCTRIKDLV-DSKKYNYKDIAILYR-----AN 369 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 ++ ++ +PY I ++ I+ + L + + + + P Sbjct: 370 YLSRNIEEFLSNYRIPYRIFGGFKFYQRKEVKDIIAYMKLIVN-SDEVSLTRIYNTP--- 425 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 R I+E ++ + + I Sbjct: 426 -RRQISEATYFKIKNYAVLNNI-------------------------------------- 446 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + + DE G+ + + + R + + E + + + + Sbjct: 447 -STFAAFKFVDEIEGIQTRTKNAVKAFYDSMIEIREK--KYGSISEMIDDIVEKTKYYEM 503 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD-QERISQRFLAGPV 659 + E T + + G + ELA E +Q+ V Sbjct: 504 LKEDGEEHRTENIIELKNASKNFEQNNPGSNINF--YLQELALLTSNDEEENQKNKQDSV 561 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 ++ T+ + + FK+V ++ N+ ++P + +L D++R + A Sbjct: 562 SLMTVHASKGLEFKIVFIIQFNENIFPSIRSLEEGNL-------------DEERRIAYVA 608 Query: 720 LISAQQKLYISYIGRSIQDNS---ERFPSVLVQELIDYI-GQSHYLPGDEALNCDESEAR 775 + A++ LYIS + + ER PS + E+ D + + Sbjct: 609 ITRAKENLYISCCNGTSFFGNREMEREPSRFISEIGDALIEKRLITKNQTKFKASTQFNN 668 Query: 776 VKAHLTCLHTRMPFDPQNYQPGER 799 H++ + Y GE Sbjct: 669 SNNGSKVDHSKFHESEKTYYVGEL 692 >UniRef50_A9F541 ATP-dependent DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F541_SORC5 Length = 685 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 70/529 (13%), Positives = 149/529 (28%), Gaps = 76/529 (14%) Query: 257 LAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLS 315 L + R R ++ + E L VG+ + + G D +L Sbjct: 189 LERWRMRYRFVIVDEYQDTNRAQLELLRLLCGEHRNVVVVGDDDQSIYAWRGADVRNILD 248 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSD------ILELENRAVAGVNIEEFSRSDNKRPLDP 369 F + + ++ + IL++ N +A +S ++ Sbjct: 249 ----------FEEHFSGAKVVKLEHNYRSRKPILDVANAVLAKSGARRHKKSLIATRVE- 297 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + +C P E + +LE P+DI V+ A SA Sbjct: 298 -GDKVRSIICVDPDVEASFVATEAQRLLER-EAARPKDIAVLYRS-----NLQAAAIESA 350 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +R +P + + ++ I+ L + + + +L+ P I + Sbjct: 351 LKERQIPIRMIGGQQFFERKEVKDLIAYLRVALNPGDEMCLRRILNYPA----RGIGDAA 406 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + L + W +V Sbjct: 407 VAKLGAYATAH---------------------------------------DASLWTAVSR 427 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEA 607 L + + LL + R + P E + + T Sbjct: 428 PHAVHELTSAAIEGCRQLLRIIEATRARFERGEPSAEVARALLADAGFKEDIMAGSSTAN 487 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 A + ++ + + L ++ + V + T+ Sbjct: 488 AAARRWGNIEGLLNVFARRDEKGKGDRASFAEFLRLLALRQDSEEEEATDRVTLTTMHGA 547 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLG--FDLMSQKPKRGDR--SRRDDDRYLFLEALISA 723 + + F V ++G+ +G+ P Q + D + GD +++R LF A+ A Sbjct: 548 KGLEFPYVFVIGLEEGLMPHQRSLDERATDAAPSGAEGGDTGGHSIEEERRLFYVAVTRA 607 Query: 724 QQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 + +LY++ R PS + E+ + + A + Sbjct: 608 RDRLYLTRAKHRGSRGKMVPRTPSRFMLEIPPELLEEREELAPVAPGME 656 >UniRef50_Q38X70 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=ADDB_LACSS Length = 1186 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 133/1062 (12%), Positives = 291/1062 (27%), Gaps = 157/1062 (14%) Query: 84 SAFNKQSMSWKLMT-----LLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQY 138 F+ ++W M +P++ L+ L + ++ +LF+ + Q Sbjct: 68 QVFSLTRLAWYFMKNTPYYQIPRISTAGLNMLVFRLLQEHQEQLQLFRGEVRHTGFVAQL 127 Query: 139 LVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHR-ANLYQRFIETL 197 + T + + E Q L + H L A + +RFIE Sbjct: 128 TKQLLELKIGCITPADLTAMAENLGDQQV---ELAKKLHDLTIIATAFEAAMQKRFIENT 184 Query: 198 ESATTCPPGLPSR------VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDI 251 L + ++ G + L L + E+ + G I Sbjct: 185 ALIDALTLFLQQQTLTDCHFYVEGFAQFTAQEQALLTTLMQQSEVQI----------GFI 234 Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYI 311 D AY + L + + GR Y Sbjct: 235 LDRAYPNQQPDG------------------------------------LNFFFQAGRTYY 258 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 L + +D D+ + + L+ V+ + S Sbjct: 259 N-LYQQARLNHVPVMMDQMADS--QRLTPALAALDQFWVSSESPGNRKLSPVPVA----- 310 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 + + E+ + + +++ RD +++ + Y I + Sbjct: 311 DHLHVVAAENRYAELRYVAREIRRLVQTGH-YRYRDFLILTRHLAPYQTMIAPI----LT 365 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT----E 487 + +PY + +HP++ LL + + EDV+ALL +L + ++ Sbjct: 366 EYEIPYFCDLPQTMAAHPLVSLLEKLLDVNLHFYRYEDVMALLKTELLIPK-GMSIAEFR 424 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L + ++G D + + + +++ G E G + V Sbjct: 425 ADLDLCENLILKNGYEG---KDWLNDFDWQFYRFGSYQEGTRTTQDEALTERINGIRRYV 481 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + ++ L + +R L W A Sbjct: 482 QATLPPFYRALKAAKTGRQVVQVLYQFLIDHGVDRQLLHWRD------QALAANQVAQAG 535 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVP------LSLLRDELAQRLDQERISQRFLA-GPVN 660 + ++ E + + L+ + L+ + +Q V Sbjct: 536 QPEQTWSTFMQMLDEYVTLLGDVSFEEDNTEQLNEFKQLLSAGFAAAQYAQIPSTLDQVV 595 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS------------- 707 + +++ ++ ++G D V P Q+ + + D Sbjct: 596 LSESGMVQTKKRQITFMIGSTDQVMPDQIENTALLTDQDRQRLLDNEGQVTPLLNESSVG 655 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY-LPGDEA 766 + + + YL A +S+Q +Y +Y + + + S V+ + ++ + + +++ Sbjct: 656 KMNAEPYLNYLAFLSSQTTVYFTYPLGNG-EGTAFKISPYVERIRNHFDLTIQKIAAEQS 714 Query: 767 LNCDESEARVKAHLTCLH---TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 L E+ L +R + Q P + + R A F Sbjct: 715 LQSTETPQGSWRSLLSDLIQVSRQAQENQTLIPEQWLTTYRLLQQAPQSQFLTTQLFQSL 774 Query: 824 LPFTLPETV---------------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD-T 867 PE + + L+ F+ + F + L++ R P T Sbjct: 775 NYRNEPERLTPEIVTGLYGNEIHTSISKLEEFYQNQYAYFLKYGLKLQERPVFELTPANT 834 Query: 868 EPFILEGLSRY-------QINQQLLNALVEQDDAERLFRRFRAAGDL-------PYGAFG 913 F E + R+ QI L+ + + + G Sbjct: 835 GNFYHEVMDRFIKLIQGQQIALPELDDQQIDKLVSEVLAKTYEQPEFKILNKTARMGYIR 894 Query: 914 EIFWETQCQEMQQLADRVI--ACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSL 971 + +T + L ++ + R + + G + ++ R + Sbjct: 895 QQLMQTVKRVSLALRNQSLSTNLRPLATEVLFGQVGAEKGLQGLNFMLDDHREVKVRGKI 954 Query: 972 LSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGM 1031 + Q F +D + AL L +E + Sbjct: 955 DRIDQLTIN--NQPYLGIVDYKSSQHSFNFRDAYYGL-------ALQML-TYLETVLQDQ 1004 Query: 1032 SAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQ 1073 A L S Y + L +K + + Sbjct: 1005 QAILP--ANSAVKPAGAFYLHLKNPTLTLKQLTKKKMGQLQK 1044 >UniRef50_Q2S550 ATP-dependent DNA helicase pcrA n=2 Tax=Rhodothermaceae RepID=Q2S550_SALRD Length = 786 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 72/549 (13%), Positives = 160/549 (29%), Gaps = 86/549 (15%) Query: 257 LAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLS 315 L K TR + ++ + A +L VG+ + + G D +L+ Sbjct: 227 LEKYQTRWQYVHIDEYQDTNQAQYVLARKLSARHKNLCVVGDDAQSIYAFRGADITNILN 286 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR---SDNKRPLDPLDS 372 F + PD ++ + EN +I E + + + Sbjct: 287 ----------FDNDYPDATTIRLERNYRSTENIIRLADSIIEENDDQIEKSLWTDNAEGE 336 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 + S + E + + R+ + D + D V+ A Sbjct: 337 YVALMEALSEKDEAQKIERRVRDLHLRD-GMEYGDFAVLYRTNAQ-----SRAIEEALRK 390 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY + + ++ ++ L L + + + +++ P I ++ Sbjct: 391 ENVPYRVIGGTSFYERKEIKDVLAYLKLLVNPNDTASLQRVINYP----TRGIGDKTQAR 446 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L+++ + + WQ+V +E Sbjct: 447 LQRYAQQH---------------------------------------SLSLWQAVERVEE 467 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQ-ERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 L + + + P +E E Sbjct: 468 IETLGTRAERAVGKFRRLIARYASKAGTGSVPADELARDLIQDAGLLSELRKEHTRENLQ 527 Query: 612 IEQQWQAII-AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 + Q +I A + + +S E+A DQ+ V + TL + Sbjct: 528 RWENVQELISALAEYVESTEDATISTFLQEVALMTDQDE--AEEGDDKVTLMTLHAAKGT 585 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 F VV + G+ +G++P + A +++ +++R LF + A+++LY+S Sbjct: 586 EFPVVFVAGLEEGLFPLEQATQ------------EKAELEEERRLFYVGVTRAEERLYLS 633 Query: 731 YIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP 788 + + S ++E+ + ++ E S + Sbjct: 634 WARSRYRYGEQTSNTRSRFLEEVDSDVVRTEAGGELEQQTDRFSAEEGPSADYDE----- 688 Query: 789 FDPQNYQPG 797 DP Y+ Sbjct: 689 MDPHYYRQD 697 >UniRef50_P57654 ATP-dependent DNA helicase rep n=4 Tax=Buchnera aphidicola RepID=REP_BUCAI Length = 645 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 71/555 (12%), Positives = 173/555 (31%), Gaps = 86/555 (15%) Query: 219 LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFR 278 L P+ +Q L + + F Y + L + Sbjct: 147 LTPLQVQLLAKSSQEKD----FAYVYEQYTNYLYKANILDFDDLICMPTLLLKNNKKIKI 202 Query: 279 DSENAGQLFNSDGEQDVGNP------LLAS----WGKLGRDYIYLLS-DLESSQELDAFV 327 + D QD N +LA+ + +G D + S + Q + Sbjct: 203 RWQKKISYLLVDEYQDTNNSQYELIKMLANKNSDFTLVGDDDQSIYSWRGANPQNIFLLK 262 Query: 328 DVTPDNLLHNIQSDILEL-ENRAVAGVNIEEFSRSDNKRPLD--PLDSSITFHVCHSPQR 384 P+ + ++ + A I K+ + I + + + Sbjct: 263 KDFPNLKIIKMEHNYRSSGRILKAANSLIANNIHYLEKKLFSQLKYGNLIKVLIGKNEEN 322 Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E + + ++++ + + RD ++ + + A +PY IS++ + Sbjct: 323 EAQKIVKKIISQYAK-KKIKYRDFAILYR-----GNYQSRILEKALIKENIPYNISEKSS 376 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 S P ++ +S L + +R + + ++++P I + L+ L +W N+ + Sbjct: 377 FFSRPEIKDLLSYLRVVINRDDNHAFMRIVNIP----SRQIGKTTLKKLEEWANKKHV-- 430 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 +Q+ + L + + Sbjct: 431 -------------------------------------SLFQASNNIEIKKFLNENTIKKI 453 Query: 565 ASLLMQLNIW--RRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLIEQQWQAII 620 + + ++ + L +++ + L+ F + + ++ + Q Sbjct: 454 KNFISKIEKFTAWSCLKPSNIIDDIVDDLEYEKWLSKFLKDPNKIKNSINNVHTLSQWFK 513 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 G + + L + + R + + V + TL + + F V ++GM Sbjct: 514 NMIKGDDFEKPMTLFQIVTRMTIRDILDDNIIKEQQDRVQLMTLHASKGLEFPAVFIIGM 573 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 +G+ P Q + D +++R L + A+++L+ +Y + Q Sbjct: 574 CEGILPNQKSI-------------DNDNIEEERRLTYVGITRAKKQLFFTYCYKRTQYGQ 620 Query: 741 --ERFPSVLVQELID 753 + PS + EL Sbjct: 621 ILDMLPSRFLFELPQ 635 >UniRef50_B2KB12 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KB12_ELUMP Length = 786 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 65/547 (11%), Positives = 146/547 (26%), Gaps = 87/547 (15%) Query: 226 ALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQ 285 A+ AL +I+ + + Y + L + + +N Q Sbjct: 159 AISALASNIDFKIRAAEVYKRYQNKLNAAGALDFGDLLVKTAELLKNNEDVREYYQNIFQ 218 Query: 286 LFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDA-----------FVDVTPDNL 334 D QD + L + L + Q + + F PD Sbjct: 219 HILVDEYQDTNHTQYIITRTLAYKHRNLCVVGDPDQSIYSWRGANIRNILEFEKDFPDAK 278 Query: 335 LHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHD 391 + ++ + + + + + + + + I + E Sbjct: 279 IITLEQNYRSTQIILDSSNKLIKKNKKRKDKSLYSNKTSGEPIEVRELLTEGEEARWTAQ 338 Query: 392 RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVL 451 + ++ + + DI V F LPY + + Sbjct: 339 NIANLI--EDGASLNDIAVFYRTNAQSRN-----FEDNFRKYQLPYRLIGAVRFYDRREI 391 Query: 452 EAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 + + + + + +L +L+ P + I + ++ N I Sbjct: 392 KDILGYARVLVNPLDTVSLLRILNTP----KRGIGKTAEEKFLEYANLHNI--------- 438 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 +Q++ GL + + Sbjct: 439 ------------------------------SLYQALQRSAFVEGLTPTARRAAQEFINLM 468 Query: 572 NIWRRGLAQERPLEEWLPVCR-----DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 + R L P + + + D E A + +++ A+ Sbjct: 469 DTLRLELKVTSPTDIVNKILTLSGYWKAVEDEVEKDLEAGARLDNLQELVNAVKEYEERM 528 Query: 627 QYGD-AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 + LS E+ + Q AG V + T+ + + F VV + G+ +G++ Sbjct: 529 ARTEREASLSDFVQEI-SLITGADEKQDSSAGAVTLMTVHLAKGLEFPVVFVSGLEEGLF 587 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERF 743 P +++R L A+ A+ +L+++Y Sbjct: 588 PLSSKDDDD--------------LEEERRLCYVAMTRAKDRLFMTYTSTRRIFGKMYTNL 633 Query: 744 PSVLVQE 750 PS + E Sbjct: 634 PSRFLFE 640 >UniRef50_A7KV33 PcrA helicase n=1 Tax=Bacillus phage 0305phi8-36 RepID=A7KV33_9CAUD Length = 657 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 58/478 (12%), Positives = 144/478 (30%), Gaps = 88/478 (18%) Query: 293 QDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAG 352 VG+ +G G + +L+ F P + ++ + AG Sbjct: 257 FVVGDDYQGIYGWRGANIEKILN----------FQKDYPGTKVVKLEQNYRSTNTIVTAG 306 Query: 353 VNIEEFSRSDNKRP---LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 I + + + + I + ++E + + + D DI Sbjct: 307 NAIMKHNTKQMNKTCFTDKGMGEKIRKYEAPDDEQEARFIAQEIQNLCTFD-GYKYEDIA 365 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 ++ + +PY + + ++ +S + L + Sbjct: 366 LLYRT-----NVQSRLLEDQFIRHNIPYNMVSGFSFYERKEIKDIMSWMQLAVNPDNDIA 420 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 +L+ + + + ++ ++ Sbjct: 421 CDRILN-----MQAGVGKTTIKQIKD---------------------------------- 441 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA--QERPLEEW 587 A E + ++ V ++ + L + +LN ++P+ + Sbjct: 442 -----KANEKNKSIYEVVEYFNPKTAKAKAAFVGLTDTVARLNALYEAGKSVSDQPITDM 496 Query: 588 LPVC---RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 L + + E + ++ I L D++A + Sbjct: 497 LELIFKYTQYIEKLQETGKEEDFRRIDNIKELTKIAKGYEQENKDPH--LQDFLDQIALQ 554 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 Q+++ + V + TL + + + VV ++GM +G++P + Sbjct: 555 SQQDKVVNQ---DKVQLMTLHTSKGLEYPVVFMIGMEEGLFPHSRS------------LS 599 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE---RFPSVLVQELIDYIGQSH 759 D + +++R L + AQ+ LY ++ R + N + PS ++EL D + Q Sbjct: 600 DTVQLEEERRLAYVGITRAQEILYFTHAERRMDYNRTYNWQTPSRFMEELPDELIQEV 657 >UniRef50_Q018Z5 ATP-dependent DNA helicase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q018Z5_OSTTA Length = 859 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 70/531 (13%), Positives = 149/531 (28%), Gaps = 55/531 (10%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIY 312 P A R + ++ + E +L VG+ A +G G + Sbjct: 285 PDVRAYYERRWSQVLVDEFQDTSTTQYELIRKLSQPQGSVFVVGDADQAIYGWRGAEVAN 344 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS 372 + + + ++L + A A + F + P Sbjct: 345 IRTQFDQD------FKEVQTHMLTTNYRSTSTIVEAAQAVIKESSFPSPLDLVAHTPGGR 398 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 + + + E E + ++ +D L D+ V+ V A Sbjct: 399 DVAIVEANDDREEAEFIALEARKLV-QDSDLRYSDVAVLYRTNSQAR-----VLEEAFIR 452 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +P+ + + S ++ I+ L + + + + +++ P I + Sbjct: 453 AGVPHTVVGDTSFYSRKEIKDMIAYLRIVSNSSDTVSLNRIINTP----TRGIGNSTIEK 508 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L W+ + G+ L A + +LP + Sbjct: 509 LNAWLKTLPKKDGLSPSIGDALLRGAWKTNPGEQ------------------SELLPSAD 550 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 GL A + + + + ++ P E V + + DA+ Sbjct: 551 EMGLTARARTAVLNFVELMRACQQTAMNATPGELLEDVIKRTGYETMVLDADDGVDRWAF 610 Query: 613 EQQWQAIIAE---GLGAQYGDAVPLSLLRDELA--QRLDQERISQRFLAGPVNICTLMPM 667 Q+ + E + D V L L L L + T+ Sbjct: 611 VQELINLAKEPPRDVDETIQDRVGLEALGAFLEGVSLLTSAETDDVTGGDKAKLMTMHAS 670 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F V + G+ DG+ P D +D++ LF + A++KL Sbjct: 671 KGLEFDTVFIAGVEDGLIPFIRNGDSDD------------DQDEEVRLFYVGITRAKRKL 718 Query: 728 YISYIGRSIQDN---SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 + + + S L+ + + + L+ S Sbjct: 719 MLCHARERRRFGQSPQAARRSFLLDSISATLTGTKKPERPVTLHGGVSARA 769 >UniRef50_B2V7G3 UvrD/REP helicase n=5 Tax=Aquificales RepID=B2V7G3_SULSY Length = 706 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 54/464 (11%), Positives = 129/464 (27%), Gaps = 87/464 (18%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSD------ILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 + + F P + ++ + IL+ N ++ + + Sbjct: 256 AHPENILDFEKDFPGTKIVKLERNYRSTKKILDCANAVISKSKGKWKGKVLTLWTDKEEG 315 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 I + + E + +++ + ++ + D V+V F+ A Sbjct: 316 EDIFLVPLENEKEEARFIANKIKQLAQDG---SYGDFAVLVR-----MTFLTRNIEEAFI 367 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +PY + ++ ++ L L + L VP + ++GL Sbjct: 368 SNGIPYQVIGGLKFFERAEVKDILAYLKLAVNPKDYASFERSLTVPP----RGVGDKGLE 423 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 Y++ + + W L D Sbjct: 424 YIK-----------------------SNFKTDWIQALK---------------------D 439 Query: 552 ESSGLIAELVGHLASLLMQLNIWRR--GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + L L + + + +E + + E E Sbjct: 440 SYERFNKSVKIKLQEYLELMEYVLENAKFSPSKTAKEIVERI--GYQEYLQ--KEYEKDW 495 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + +I A+ L + + I T+ + Sbjct: 496 EDRVENINELIIALEEAEKEGK----TLDQFFEESALMQAQDTIDNQNKAKIMTVHGAKG 551 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V + G+ +G++P A D ++ +++R LF A+ A+ KLY+ Sbjct: 552 LEFDTVFVAGLEEGIFPSGRAFD------------DPTQLEEERRLFYVAITRAKNKLYL 599 Query: 730 SYIGRSIQDNSERFP---SVLVQELIDYIGQSHYLPGDEALNCD 770 +Y ++ P S + ++ ++I ++ Sbjct: 600 TYAKERKSYGNKSVPTKRSQFIDDIKEHIKLPVKQKTQPNVSNR 643 >UniRef50_D1PL59 ATP-dependent DNA helicase n=4 Tax=Ruminococcaceae RepID=D1PL59_9FIRM Length = 871 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 59/444 (13%), Positives = 126/444 (28%), Gaps = 72/444 (16%) Query: 326 FVDVTPDNLLHNIQSDIL---ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSP 382 F V ++ + + N A + + + + + S Sbjct: 323 FEQVFTGAKTIRLEQNYRSTSNILNAANSVIKNNTGRKGKTLWTEKGDGDKVHHYTAASE 382 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 Q E + D + L RD V+ +P + A +PY I Sbjct: 383 QDEASHIADVIGEHLR--EGAHLRDHAVLYRMNAQSNPI-----ETYFARAGIPYRIVGG 435 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + ++ S L++ + + +++ P I + + + G+ Sbjct: 436 QRFFDRKEVKDINSYLAVIVNPRDDVRLRRIINEPA----RKIGASTVDKVGELAARQGV 491 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 V Y E A + Sbjct: 492 P------------------------------------MLQIIADVRQYPEL-TRAAASLE 514 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET-EAAMTLIEQQWQAIIA 621 + +L + + E + + A E E + + Q ++ Sbjct: 515 KFYEMYRELCDLSVTIPLDEFAGEVIK--KTGYEAMLKAQKEEGETRLENLGQLVSSVKT 572 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 + +E+A D + Q A V + T+ + + F V ++GM Sbjct: 573 YADQNGEDATLS--GFLEEVALISDLDSYDQ--DADSVTMMTIHSAKGLEFPYVFVVGME 628 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 DG++P +A + +++R L A+ A+++LY+S + Sbjct: 629 DGIFPGDMAR------------YNEEDMEEERRLCYVAITRAKKELYLSTSRSRLIFGQT 676 Query: 742 RF--PSVLVQELIDYIGQSHYLPG 763 R PS + E+ + + P Sbjct: 677 RRNLPSCFLSEIDPGLMEETQSPE 700 >UniRef50_A9WKU6 DNA helicase II n=2 Tax=Bacteria RepID=A9WKU6_RENSM Length = 797 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 65/588 (11%), Positives = 145/588 (24%), Gaps = 88/588 (14%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR 308 D + ++ + + L G VG+ + + G Sbjct: 232 ADYYRRRFRHVMVDEYQDTNHAQYALVKEIVGPAEGSGDEPAELTVVGDSDQSIYAFRGA 291 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPL 367 D ++ F P+ ++ + + + A IE+ KR Sbjct: 292 DIRNIVE----------FEKDYPNARTIKLEQNYRSTQTILSAANAVIEKNPDRPVKRLW 341 Query: 368 DPLDSSITF--HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV 425 +V + E + + + L+++ P D+ + Sbjct: 342 TAEGDGEKIIGYVAENEHEEARFIAEEI-DRLQDEADFRPGDVAIFYRTNAQSRSI---- 396 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 LPY + ++ ++ L + + ++ +L+ P + I Sbjct: 397 -EEILMRVGLPYRVVGGTRFYERKEIKDALAYLRVLVNPEDDVNLRRILNEP----KRGI 451 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 D L + ++ L Sbjct: 452 G--------------------DRAEGAVAALAERERSSFMAALR---------------- 475 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 + V L+ L LE L L Sbjct: 476 HAEDAPAIATRSLNAVNGFVKLIDDLTEVASTSGAATALEAVLEQ-TGYLETLRASSDPQ 534 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-------- 657 + + + A++ E + L+ + +A D ++I + Sbjct: 535 DESRVENLAELVAVVREYERDKPEG--SLTDFLEGVALVADADQIPDAPGSDTEAAVAEA 592 Query: 658 ----PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 V + TL + + F V L GM G++P+ + D ++R Sbjct: 593 RRLGVVTLMTLHTAKGLEFPAVFLTGMEHGIFPQARS------------ATDAKELAEER 640 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDE 771 L L A+++LY++ + S + E+ + + A+ Sbjct: 641 RLAYVGLTRARKRLYLTRAEVRSLWGQSQYNPASPFIDEVPANLIEWKREGMSRAIPSIG 700 Query: 772 SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 S + + H G+ + Sbjct: 701 SSGFGRDRYSGSHWGAGSAVGGRDAGQLPPSLATRSARVQPQKEIPQL 748 >UniRef50_UPI000051001F putative ATP-dependent DNA helicase II n=1 Tax=Brevibacterium linens BL2 RepID=UPI000051001F Length = 850 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 69/547 (12%), Positives = 155/547 (28%), Gaps = 54/547 (9%) Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 +HL P D + L+ + + L + V Sbjct: 214 VHLFGAFPEV---ADFYRRRFRHILVDEYQDTNPAQYALIKALAG-DGAGGATGAELTVV 269 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 G+ + + G ++ E + LL + + A A ++ Sbjct: 270 GDSDQSIYAFRGATVRNIM-------EFEKDFPNAETILLEQNYRSTQNILDAANAVISN 322 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 + + + +I V + Q E + DR+ ++ ++ T D V Sbjct: 323 NQDRKDKKLWTSEGTGETIVGWVAENEQAEARFIVDRVDELI-DNEKYTYGDFAVFYRTN 381 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 A +PY + ++ ++ L + + ++ +L+ Sbjct: 382 AQ-----SRAIEDALVRSGIPYKVVGGTRFYERKEIKDALAYLRVVANPDDDVNLRRILN 436 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 VP + I + + + + GI + + E+ + T ++ Sbjct: 437 VP----KRSIGDRTEGIVADFADREGISFYTALGRLDEIVHLSARAKTSVAKFYDLMRDL 492 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGH------------LASLLMQLNIW-----RRGL 578 A + V+ E + LA L+ + Sbjct: 493 AATAEAAPLSRVIEAILEQSGYLESLQKSTDPQDESRVDNLAELVAVAEDFVATRALADA 552 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 + ++ + ++ + + + + A + + S + Sbjct: 553 TDDEDADDADAEAAETGSSTAVDEGSSAEDGDAGDSTDDAGADAADEGRDAPSAGGSSIE 612 Query: 639 DELAQRLDQERISQRFLA--GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 L Q Q A G V + TL + + F VV L G+ DG +P + Sbjct: 613 AFLEQVALASDTDQIPDAELGQVTLMTLHTAKGLEFPVVFLTGLEDGGFPHARSFEN--- 669 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDY 754 S ++R L L A+Q+L ++ + PS + E+ + Sbjct: 670 ---------PSELSEERRLAYVGLTRARQRLIVTRAETRSMWGQPQYNPPSRFLSEIPES 720 Query: 755 IGQSHYL 761 + + Sbjct: 721 LIEWENT 727 >UniRef50_C8NER5 Exonuclease RexB n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NER5_9LACT Length = 1190 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 99/797 (12%), Positives = 233/797 (29%), Gaps = 120/797 (15%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 L+ W G D ++ E F + + ++++ Sbjct: 266 LSRWINRGDDLARII---EWENTESIFDEEFKEVEQFWLETN--------------GGLP 308 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 + ITF + E + ++ M++ + +DI ++ +++ Sbjct: 309 KVKRTPEQKIPLQKITFTKYTDEREEYQETFAQIKRMVQTG-NVRYKDIQILGRNLEENH 367 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 F++++ +P I + + HP+++ +L ++ + D+++LL + Sbjct: 368 LFLESLLKQY----AIPGFIDLSDSMEHHPIIQVLDALFAIWQYDWRYADIMSLLRSEYV 423 Query: 480 AARFDIT---EEGLRYLRQWVNE------SGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 D ++ L+ RQ ++E + G N + Sbjct: 424 LWHKDDETSLKDQLQAFRQQLDETETVILANGYEGYQWTNGKPWSYVEDSIDEDSKVEQT 483 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 + A+ + + E + L L ++ W V Sbjct: 484 DKNTRVLLKAEQLRNELTSILLPAFKKIEQSTTTKEAVSVLYQLLLTLGVDQSFIYWRDV 543 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 + D ET + ++ ++ E + + L +Q Sbjct: 544 AAE------EGDVETARRQEQVWTEFIRLLDEYIYIFGEKSFDWETFMMLLHTGFEQTHY 597 Query: 651 SQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK------- 702 + + I + +R P K+ +G++ GV PR + G ++ Sbjct: 598 NLAPSTLDELTITGMDSVRYTPKKITFAVGLSQGVMPRNIDETGLLTDDERELFSNHLDS 657 Query: 703 -----RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 + + ++F + L+SA + LY+S +D E+ S +Q L+ + Sbjct: 658 GRFLAPTTGQLQSVEPFVFYQLLMSATEHLYLSCAIS--KDGKEQLVSNFIQRLLKHYEL 715 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH 817 N E V + + ++ E + + +P + Sbjct: 716 EEIDGSFNRQNRLEQGDFVVPYELFTTLLLKMRENKFKEKEEIDFLWKLIPHLLKVDATF 775 Query: 818 S-------------EFVQPLPFTLPETV-------PLETLQRFWAHPVRAFFQMRLQVNF 857 S LP +L + + ++ ++ P F Q L++ Sbjct: 776 SANYHALLASVFRLNVASKLPLSLAQELYGNQLNLSTSQIETYYKDPFSHFLQYGLRLKE 835 Query: 858 RTEDSEIPD-TEPFILEGLSRY---------QINQQLLNALVEQDDAERLFRRFRAAGDL 907 R E P T + E ++ + L + + +F R + Sbjct: 836 RQEFELSPANTGEYFHEFFDQFIKELNARGISLRDLTLEQKLA--IEKDIFNRMKDNPKF 893 Query: 908 -------PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG----------- 949 + +T Q L + +A E+ +G Sbjct: 894 AILASSRRLNFVQGLLHQTLMQTTNALQKQALALETKPWMTEVVFGTSGNYPIHIPIGHN 953 Query: 950 --VQITGWLPQVQ--------PDGLLRWRPSLLS---VAQGMQLWLEHLVYCASGGNGES 996 + + G + ++ +G++ ++ S + ++ L Y Sbjct: 954 QSIHLRGKIDRIDLLQADNGIFNGIIDYKSSEQKFEIAKLIAGVQIQLLTYLKVSEE--- 1010 Query: 997 RLFLRKDGEWRFPPLAA 1013 +R + PL A Sbjct: 1011 --IIRSEKGVIPTPLEA 1025 >UniRef50_C5VHV2 ATP-dependent DNA helicase PcrA n=20 Tax=Bacteroidales RepID=C5VHV2_9BACT Length = 851 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 66/588 (11%), Positives = 159/588 (27%), Gaps = 75/588 (12%) Query: 257 LAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG-NPLLASWGKLGRDYIYLLS 315 L + R + E L + ++ S Q + + G + Sbjct: 210 LFRDNKEIREKYGQQFEYILVDEYQDTNYAQVSIISQLAETHRRICVVGDDYQSIYSF-- 267 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELE-NRAVAGVNIEEFSRSDNKRPL--DPLDS 372 + + F D L ++ + + A ++ R K + Sbjct: 268 RGANIDNILDFKHKFDDAKLFKLERNYRSTQLIVQAANSLMKHNERQIPKDVFSKEAEGD 327 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 I + C+S + E V+ + L ++ + + ++ F Sbjct: 328 KILYKPCYSDREEAMVVANELKR-IKRNDDCDYGNFAILYRTNAQSRS-----FEDEFRK 381 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 + +PY I + ++ I+ L + E +++ P I ++ Sbjct: 382 QGIPYKIIGGLSFYQRKEIKDIIAYFRLVSNPNDEEAFRRIINYP----TRGIGNTTIQK 437 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT----RMLLGYAMESAQGEWQSVL 548 + ID + L T + ++GL M +A + + + Sbjct: 438 I------------IDCAQRNSVSLWETILNPIQYGLDVNKGTMTKLFAFRTLISGFIKNV 485 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 ++ L E++ R D Sbjct: 486 ALKDAYELGKEIIEE---------------------SGLSADIRSGSE---PEDLARREN 521 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + Q + G + V L+ E+A D ++ V + T+ + Sbjct: 522 LEEFMSAMQGFVDSGREEGREENVYLTDYLQEVALYTDADKEDDDTP--KVTLMTIHAAK 579 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F V ++G+ + ++P ++ + +++R L A+ A++ Sbjct: 580 GLEFPTVFVVGLEENIFPSPMSASS------------KREIEEERRLLYVAITRAERHCI 627 Query: 729 ISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 ++ + S + PS + + + + + + Sbjct: 628 LTNAKNRFRYGSMQVDNPSRFLNDFDPALIHVEDEANSAFGGERRKMPWDEDNSSRNAWG 687 Query: 787 MPFDPQNYQPGERQSY---AREWLPAASQAGKAHSEFVQPLPFTLPET 831 N++ E +R W Q G + Sbjct: 688 RNRSEDNFREYEPNKAYTGSRPWGQEYRQMGSRWQNSNPVASQFRADP 735 >UniRef50_Q3AA34 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Carboxydothermus hydrogenoformans RepID=ADDB_CARHZ Length = 1090 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 88/682 (12%), Positives = 199/682 (29%), Gaps = 113/682 (16%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 RA +++ + P +++ +P E+E ++ L + Sbjct: 259 RYRASELLHLAQNYYPLLPDPYSGSLENLSLIAAANPLEEMEKAAR-IIRYLAKFKGYKL 317 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 DI+V++ + Y I+ VF LP + A H + LL F Sbjct: 318 SDILVLIPEDGYYISNIKTVFNEY----GLPVYVDKGLAFDHHGLYF----LLKGVLGEF 369 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 E + L +L ++T + + L ++ G+ + ++ +W Sbjct: 370 NREAAINCLKSGLL----NLTADEVFALENYLLSRGLDGEKLVLKEAWEDPNSSYWESWE 425 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 G ++ + +LP L+ L + R + Sbjct: 426 KGFGEIIS----------FSQILP----------LINTYREFSQSLKQLLLKIGVPRRIS 465 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 + Q + ++ E + + + +EL L Sbjct: 466 D--------------------ENGERFWQAFTNLLTEIEEVFGAERLNPTTFAEELLAYL 505 Query: 646 DQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 + + V + + V +LG +G +P A ++ K Sbjct: 506 AKLSLKTIPKGLDQVRAGGSKRYWTGEARAVIILGAVEGKFPSPPAAGLIFTEEERAKLK 565 Query: 705 D---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 R R +D + AL A++++Y+SY S P++LV L Sbjct: 566 KVGLELSPLIRQRLKEDNFHVFLALTRARERVYVSYPRVS-LTGESFTPALLVDWLKKAF 624 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRM-------------PFDPQNYQPGERQSY 802 L +E +E+ + L F+ E + Sbjct: 625 PN---LKSEEGSYGNETTPQALTRLLSREMVKVKKNGELPFIAQGAFNALLLSKPELITK 681 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 K ++ F + LP +T+ + L+ +++ P++ F + ++ R + Sbjct: 682 IARAFATNPGKIKLNAGFKEFLP---SKTLSVSRLETYYSCPLKYFLKYLIKAEEREIFT 738 Query: 863 -EIPDTEPFILEG--------LSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYG--- 910 E + + + Q LL ++ + + + G+ Sbjct: 739 PEATEIGALLHGAVAEIIKTVREKGQKLSTLLAEDLKTLVYQAFTKAQQEYGEKFLATYR 798 Query: 911 --AFGEIFWETQCQEMQQLA-------------DRVIACRQPGQSMEIDLACNGVQITGW 955 F + + ++ LA + ++ +S ++ + G Sbjct: 799 GRYFLNRLYLMLFKAIEALAYFEGFTKFTPFGEEIAFGEKERLKSPVFEVNGEKYTLAGK 858 Query: 956 LPQVQ---PDGLLRWRPSLLSV 974 + ++ +G R Sbjct: 859 IDRIDVYENNGKTYLRIIDYKT 880 >UniRef50_B8GFE8 UvrD/REP helicase n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GFE8_METPE Length = 1019 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 89/715 (12%), Positives = 193/715 (26%), Gaps = 116/715 (16%) Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITF 376 L + ++ + + LL + + + A+ + R +T Sbjct: 269 LTNIRDFKQWAATHTETLLDQNYRNSGAVLSLALQVMAGAPGRREKALFTEKGDGEPVTV 328 Query: 377 HVCHSPQREVEVLHDRLLAMLEE---------DPTLTPRDIIVMVADIDSYSPFIQAVFG 427 C + E E + + ++ D L RD V+ F Sbjct: 329 AACGNDAGEAEYVAAEIEKLVGTPYHSRQDGGDRPLEYRDFTVLCRTKAD-----GKKFQ 383 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF-VSEDVLALLDVPVLAARFDIT 486 +A +P PV+ ++ L + D+ + + ++ + + Sbjct: 384 AALQRHAIPCEYQANVDFMQLPVVRDMVAYLRIIDNPLMAAVPLNRVMKICSIP------ 437 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + Q +N + I+ G D G +++ Sbjct: 438 ----ETVVQKINAAAIKRGDD-------------------------------DDDGVYET 462 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 + AE VG + +L + + + + + +T Sbjct: 463 MQDAASIVPDHAEPVGEVVRMLAPFIEQKERYTLPELVHAVMMQASGL---YRSALTDTA 519 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVP-LSLLRDELAQRLDQERISQRFLAGPVNICTLM 665 + L + I+ E +P L + L + Q+ V I T Sbjct: 520 DMVRLYLATFHEIVLEFDRTTPEATIPGLLQYLELLGAFPVEVVREQKEAGDAVQILTAH 579 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL---MSQKPKRGDRSR---RDDDRYLFLEA 719 + F VV + + +P + +P F + +++ + GD + ++R L A Sbjct: 580 KSKGKEFPVVFVADLAREKFPLRYSPKRFRVPGDLARGLRTGDDEKALFVQEERRLLYVA 639 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQEL-------------IDYIGQSHYLPGDEA 766 + A+++LY++Y + ER PS ++EL GD Sbjct: 640 MTRAEERLYLTYAKWYGDNKRERKPSPFLEELNFRENPLITVVEPPACAPALPVTAGDPV 699 Query: 767 LNCDESEAR-------------VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQA 813 + S L L + Q +R ++ + Sbjct: 700 EDLRTSLQEEVVRAVSEMRISTAIQTLVTLEGVREYAEQGTDDFDRDAFLAKAGSRVGAD 759 Query: 814 GKAHSEFVQPLPFTLPE--TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI 871 + + P +P L + P++ F +V + Sbjct: 760 TRITTLLDPPHQSLIPPNYRFSASALSTYQDCPLQFKFANLYRVPLPRQPQ--------- 810 Query: 872 LEGLSRYQINQQLLNALVEQDDAERLFR----RFRAAGDLPYGAFGEIFWETQCQEMQQL 927 L ++ L D + R P + L Sbjct: 811 ---LVFGSTLHSVIEHLTRNPDPSQSLRDQGLALLEEYWSPEPYESKTQESEAHDSASAL 867 Query: 928 ADRVIACRQPGQ------SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 D +A + E + G I G++ +++ + + Sbjct: 868 LDTYLAWQAGNPNTVIGVEKEFTFSFAGHSIHGFIDRLEQTPDGNYVVIDFKSGK 922 >UniRef50_P03018 DNA helicase II n=409 Tax=cellular organisms RepID=UVRD_ECOLI Length = 720 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 64/464 (13%), Positives = 128/464 (27%), Gaps = 77/464 (16%) Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 G + L+D ++ + + + +IL N + Sbjct: 258 GAQVENIQRFLNDFPGAETIRLEQNYRSTS-------NILSAANALIENN---NGRLGKK 307 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 I+ + + E + +R+ +D + ++ Sbjct: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTW--QDNGGALAECAILYRSNAQ-----S 360 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 V A +PY I ++ +S L L +R +++ P Sbjct: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP----TR 416 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 I + L +RQ Q T +L A Sbjct: 417 GIGDRTLDVVRQTSR--------------------DRQLTLWQACRELLQEKA------- 449 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV--CRDMLNAFFLP 601 +G A + L+ L + + + R M Sbjct: 450 ---------LAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQ--EK 498 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 + + + +E+ A + D +PL L+ V + Sbjct: 499 GEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH--AALEAGEGQADTWQDAVQL 556 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 TL + + F V ++GM +G++P Q++ + R +++R L + Sbjct: 557 MTLHSAKGLEFPQVFIVGMEEGMFPSQMS------------LDEGGRLEEERRLAYVGVT 604 Query: 722 SAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPG 763 A QKL ++Y E PS + EL + + L Sbjct: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRA 648 >UniRef50_D2NR24 Superfamily I DNA and RNA helicase n=17 Tax=Bacteria RepID=D2NR24_9MICC Length = 985 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 66/524 (12%), Positives = 133/524 (25%), Gaps = 99/524 (18%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 + D Q + D VG+ + + G D Sbjct: 354 LVDEYQDTNHAQYQLVRELVGAHVKAPADRGPYPDAVPPAELTVVGDSDQSIYAFRGADI 413 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDP 369 + F P+ ++ + +N + A IE K+ Sbjct: 414 RN----------ITDFEKDYPNAHTILLEQNYRSTQNILSAANAVIERNPDRRPKKLWTA 463 Query: 370 LDSSITF--HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + +V S E + + L ++ + P D+ + Sbjct: 464 SGAGAKIIGYVAESEHAEARFITREI-DRLADEHGVQPGDVAIFYRTNAQSRTL-----E 517 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 LPY + ++ ++ L + +V +L+ P + I Sbjct: 518 DMLMRAGLPYRVVGGTRFYERKEIKDALAYLRALSNPDDDVNVRRILNEP----KRGIGA 573 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + + + I + + Sbjct: 574 KSESVVADYATAHRI---------------------------------------SFFAAA 594 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + GL A V A + ++ +A+ P L + A + Sbjct: 595 RQAADVPGLGAAAVKKYAEFVRLMDDL-AQIARTEPAATCLEAVLEQTGYLAALRASKDI 653 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDA-VPLSLLRDELAQRLDQERISQRFLA---------- 656 + ++ + + + L + +A D + I R + Sbjct: 654 QDESRVENLSELLDAMVEFETENPGADLEQFLEHVALVADADSIPNRPASAEGESASAAQ 713 Query: 657 -----------GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 G V + TL + + F VV L GM G++P Q A D Sbjct: 714 IAAEAAEAKAQGMVTLMTLHTAKGLEFPVVFLTGMEHGLFPHQRA------------LTD 761 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVL 747 ++R L L A ++LY++ + PS Sbjct: 762 EKEMSEERRLAYVGLTRAMERLYLTRSETRTMWGKSQFNPPSPF 805 >UniRef50_B1C9D7 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9D7_9FIRM Length = 1111 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 76/649 (11%), Positives = 204/649 (31%), Gaps = 89/649 (13%) Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 D +Y L L + + + ++ + + + + + S + + D Sbjct: 247 DTLYKLKKLAENNDEEVVTEIDKE-------------DEKEKDIKFLADNIFSYDTKTFD 293 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 ++I + EVE+ +L ++ ++ +DI V+ +D D+Y I F Sbjct: 294 DEINNIEIFKASTIYEEVEMTALNILKLI-KEENADFKDIQVLPSDYDTYKEIISETF-- 350 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + + + + + +L + +L++ + F + D+++ L + D+++ Sbjct: 351 --KKHNISFFLDNTTSIMDTNILRGILKILNIVEGNFKTHDIISFLKTGLT----DLSKT 404 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + + E GI+ + + + L Y E ++ Sbjct: 405 DIETFENYALEFGIKGTMWTADFKRNNPDNEYD-----------LAYLNEKKDELMLPLI 453 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + + + + + + + D E Sbjct: 454 TLRNDLKDKTS----VKEITNIFYDFLEEFGLYEKIITLVNKFK------YKEDFENANK 503 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPM 667 I + + + + LS L + +I VNI +L Sbjct: 504 YAQIHNSIITALEQIYDFLGNEELSLSEYTKVLESGFNALKIGIIPSTIDSVNIASLSRS 563 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK----------PKRGDRSRRDDDRYLFL 717 RS K + +LG+NDGV P + G +++ + ++ + D++RY Sbjct: 564 RSSEIKYLFILGVNDGVLPSNFSNSGGIFSNKEKLKAINEGINLRTTEQYKIDEERYFLT 623 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 ++ ++K+++SY + E PS ++ ++ D + + D+ N +++ + + Sbjct: 624 SVILKTEKKIFLSYPIT-GSNGDELLPSSIIFKIQDTMPKLKVKTLDKN-NFEDNLSLIS 681 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYAREWLP-----------------AASQAGKAHSEF 820 + + + + A S KA + Sbjct: 682 NYEATFKYLLNNKLHKNSSYKVNTLWDTLYDLYKEDDKGKYLIDIMNSALSFNNKAVIKN 741 Query: 821 VQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRY 878 + + + + L+ + P F L+ R ++ + Sbjct: 742 KKLIDEIYKGEIVTSISRLETYAKCPFSYFVSYALKPKERKKNE---------INKPDIG 792 Query: 879 QINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 I ++++ + + + +I ++ + + + Sbjct: 793 NILHEIISEFSRKIIDKEIKPENIEK-----AEVEKISFDITSEIIDKY 836 >UniRef50_B5YF03 ATP-dependent DNA helicase PcrA n=2 Tax=Dictyoglomus RepID=B5YF03_DICT6 Length = 625 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 61/459 (13%), Positives = 140/459 (30%), Gaps = 89/459 (19%) Query: 300 LASWGKLGRDYIYLLS---DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 + + G DY + D ++ + + + ILE+ N +A + Sbjct: 249 QSIYSFRGADYQNIFRLEKDFKNLRVIFLTKNYRST-------QQILEIANVLIANNDKR 301 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + + + + E + ++ LE +I V+ Sbjct: 302 YPKELWSDKKDGTYP---VLFRALNEEDEANFVARQIK--LEVAKGRRWSEIAVLYRTNR 356 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 F A +PY + + ++ ++ L++ + + +++V Sbjct: 357 QSRS-----FEEALIRNNIPYKVIGGMSFFDRKEVKDIVAYLNVIYNPNDIVSMKRIINV 411 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P R I + +R++ N+ GY+ Sbjct: 412 P----RRGIGDATFNMIREYYNK----------------------------------GYS 433 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 + A E + + S L + L L + + + N Sbjct: 434 LLEAVKEVSKIK-------------KEVKSFYE-LWTYLLVLKDSLTLRDLISTIINKTN 479 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 + + + + + ++ L L L ++ Sbjct: 480 YLSEFENQEKKELENRMENLMELMDFADNFSGKAQDTLGEFLTHL--SLTNSKLESTLEE 537 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 G V++ TL ++ + F+VV L+GM +G+ P A + ++R L Sbjct: 538 GKVSLITLHSVKGLEFEVVFLVGMEEGILPHYNA-------------TTKEEIQEERRLC 584 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 + A++KLY+SY + + + PS ++E+ + Sbjct: 585 YVGITRAKEKLYLSYAAKR--YSRYQEPSRFLEEIYHLL 621 >UniRef50_A9M0G6 ATP-dependent DNA helicase n=38 Tax=Betaproteobacteria RepID=A9M0G6_NEIM0 Length = 690 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 54/445 (12%), Positives = 131/445 (29%), Gaps = 68/445 (15%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL-LAMLE 398 + IL++ N+ + + +K + C + Q E + + ++ L Sbjct: 298 ARILKIANKVIENNPKLFTKKLWSKL---GEGEPVKVVACQNEQHEADWVVSQIVKQKLI 354 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 D V+ +F A +PY +S ++ ++ +S + Sbjct: 355 GGDKTQYADFAVLYR-----GKHQARIFEEALRGARIPYRLSGGQSFFDKAEIKDVLSYV 409 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 L + L + P + I + L L + +E Sbjct: 410 RLLANPNDDPAFLRAVTTP----KRGIGDVTLGKLNTYAHEH------------------ 447 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 +++ + + L HL + + +R Sbjct: 448 ---------------------ECSLYEAAQNEEALATLNNTNRQHLQAFMDMFGSYRAKA 486 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 E + ++ L E A + + +++ D + L Sbjct: 487 ETGEAGEFINSLLEEIDYENHLMQNEEGKAGEIKWRNVSDLVSWFARKGGEDGKNIIELA 546 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 + + V++ TL + + + V L+G +GV P + ++ Sbjct: 547 QTV-ALMTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLVGCEEGVLPHNDSIEEGNV-- 603 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIG 756 +++R L + A+++L +++ + + + + PS + E+ Sbjct: 604 -----------EEERRLMYVGITRAKRQLTLTHCVKRKKQGTWQFPEPSRFIDEMPQEDL 652 Query: 757 QSHYLPGDEALNCDESEARVKAHLT 781 + G E + E R A + Sbjct: 653 KILGRKGGEPIVSKEEGRRNLADII 677 >UniRef50_Q0AHY9 ATP-dependent DNA helicase UvrD n=16 Tax=Betaproteobacteria RepID=Q0AHY9_NITEC Length = 748 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 58/491 (11%), Positives = 139/491 (28%), Gaps = 82/491 (16%) Query: 291 GEQDVGNPLLASWGKL-----GRDYIYLLSDLESSQELDAF-----------VDVTPDNL 334 E N L W KL + + + + + Q + AF Sbjct: 217 DEFQDTNRLQYQWIKLLAGSGSQQHAAIFAVGDDDQSIYAFRGAHVGNMRDLEKDFSVPK 276 Query: 335 LHNIQSDIL---ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHD 391 + ++ + + + A A + + N S+ + + E + D Sbjct: 277 IIRLEQNYRSQGNILDAANALIENNKGRLGKNLWTAAGKGESVRIYYAATDVDETSFIVD 336 Query: 392 RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVL 451 + A+ L+ +I ++ V + + Y + + Sbjct: 337 EIKALHA--EGLSLSEIALLYRSNAQ-----SRVLEHGLFNASISYRVYGGMRFFDRQEV 389 Query: 452 EAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 + ++ L L S +L +++ P I L L+ G Sbjct: 390 KHALAYLRLVASPDDDNALLRVINFPP----RGIGARTLEQLQDQAEILGTSL------- 438 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 W+ L + + +L++ + Sbjct: 439 ------------WQAALK-------------VCEGRKAVTTRGDQPGRGIAGFVNLVLSM 473 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 G + + ++ + + +++ A + A+ Sbjct: 474 QQACEGQPLPEIIRRVVDQ-SGLVAHYQAEREGNNERLENLKELVNAATSFVHEAEDD-- 530 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 L+ L+ V + T+ + + F V + G+ +G++P + + Sbjct: 531 -SLTAFLAH--ASLEGGEHQAEGYQDAVQLMTVHAAKGLEFHSVFISGLEEGLFPHENSR 587 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQ 749 + + +++R L A+ A+Q+LY+SY + R PS V Sbjct: 588 N------------EPNGLEEERRLMYVAMTRARQRLYLSYAESRMLHGQVRVNVPSRFVD 635 Query: 750 ELIDYIGQSHY 760 E+ + + + Sbjct: 636 EIPEELLKRLR 646 >UniRef50_A5GA79 UvrD/REP helicase n=10 Tax=Desulfuromonadales RepID=A5GA79_GEOUR Length = 678 Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 65/498 (13%), Positives = 142/498 (28%), Gaps = 82/498 (16%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEF 358 + +G G D +L F + + ++ + N A I Sbjct: 250 QSIYGWRGADVGNILD----------FEKDFKECRVVKLEQNYRSTGNILEAANHVIGHN 299 Query: 359 SRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 ++ KR S + V + E + +R+ M L D ++ Sbjct: 300 AKRKEKRLWTASGSGRPLDLIVMQDDEEEATTVVERM-QMERFKHNLAYSDFAILYRTNA 358 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 P F +PY + ++ IS L + + +L +++ Sbjct: 359 QSRP-----FEEQLRFEDIPYVLIGGMQFYERKEVKDAISYLKVIGNSNDEIALLRIVNF 413 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P R I + + + QW E G Sbjct: 414 P----RRGIGDSTVVKINQWSMEQGC---------------------------------- 435 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--M 594 ++ +E G++ + L + E L E Sbjct: 436 -----PLLEAFGRVNEIEGIVEATRNRVQDFYRLLQGAVEEFSGEGDLAEKGRRLFKQLG 490 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP-LSLLRDELAQRLDQE---RI 650 L + A + + II + P LS ++++ + + Sbjct: 491 LEDELYRTIDDPALARRKVENVEQIINSMAAYEERIPKPTLSGFLEKVSLMDEDRFSGKD 550 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 + V + +L + + F V L+GM + + P + + + D Sbjct: 551 KKEHGRDAVTLMSLHSSKGLEFPYVFLVGMEEEILPHKRS------------IYEDFTVD 598 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALN 768 ++R L + A++ L ++ + + ER PS ++E+ ++ + L Sbjct: 599 EERRLCYVGITRARKHLIMTRCLQRKKYGKLQERVPSRFLEEIPGHLLNEQKGAAAKVLT 658 Query: 769 CDESEARVKAHLTCLHTR 786 +E++ + Sbjct: 659 EEEADKMAHDSFARIKAM 676 >UniRef50_C1XMD9 ATP-dependent DNA helicase, Rep family n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XMD9_MEIRU Length = 706 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 62/535 (11%), Positives = 148/535 (27%), Gaps = 91/535 (17%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV-GNPLLASWGKLGRDYIY 312 P L K+ R R ++ + + L V G+P + +G D Sbjct: 204 PEVLHKVQQRARFIHVDEYQDTNPVQYKLTRLLAGERPNLMVVGDPDQSIYGFRSADINN 263 Query: 313 LLS---DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 +L D ++ + + + + + + ++E + V RP P Sbjct: 264 ILDFTKDYPGARVIRLEENYRSSSSILRVANAVIEKNALRLEKVL----------RPTRP 313 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + + + + E + ++ + + I V+ + Sbjct: 314 GGEPVRLYRAPNAREEAAFVAREIVKL------GNFQQIAVLYRTNAQ-----SRLLEEH 362 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +P + ++ ++ + + S ++ +++ P I Sbjct: 363 LRRANVPVRLVGAVGFFERREIKDLLAYGRVAVNPADSINLRRIVNTPP----RGIGATT 418 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + L + ++G V Sbjct: 419 VSRLVEHAQKTGTT-------------------------------------------VFE 435 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD-MLNAFFLPDAETEAA 608 + + + + + L+ + P + V + + E Sbjct: 436 AFRVAEQVISRPQQVQAFVRLLDELIEAAFESGPTAFFQRVLEQTGFREALKQEPDGEDR 495 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + +E+ +A LS D +A E A V + TL + Sbjct: 496 LQNVEELLRAAQDWEEEEGG----SLSDFLDSVALTAKAEEPQGDAPAEAVTLMTLHNAK 551 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F V L+G+ + + P + + +++R LF + AQ++LY Sbjct: 552 GLEFPTVFLVGLEENLLPHRNSLHRL------------EDLEEERRLFYVGITRAQERLY 599 Query: 729 ISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 +SY PS ++++ + + GD + T Sbjct: 600 LSYAEERETYGKREYTRPSRFLEDIPQDLLKEVGAFGDSEVRVLPQARPEPKPRT 654 >UniRef50_A0RUT2 Superfamily I helicase n=1 Tax=Cenarchaeum symbiosum RepID=A0RUT2_CENSY Length = 977 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 102/837 (12%), Positives = 223/837 (26%), Gaps = 114/837 (13%) Query: 248 WGDIKDPA-YLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKL 306 + D+ A L + R L + ++A GN + + G Sbjct: 189 FDDMVSEAVRLFRARDDVRSEYGGRYSHILVDELQDANYAQLELVRLIAGN--ITAVGDE 246 Query: 307 GRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA-VAGVNIEEFSRSDNKR 365 + + + F D+T ++ ++ + A +A I Sbjct: 247 NQSIYGF--QGAYTSGFENFDDITGGAETISLNNNYRCTKTIAGLAAQCIANTPSGSQAG 304 Query: 366 PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE-EDPTLTPRDIIVMVADIDSYSPFIQA 424 + P S + C E + DR++ + + I V+ I Sbjct: 305 AVHPEGSPVEIVECADEDSEAACIADRIVQIRSPGGESAGYS-IAVLTRKIAD-----GK 358 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 F R +P S S ++ L + + + + LL + Sbjct: 359 KFSDELELRGVPARYSGGDGIFSAGPARELLTYLEIARAPASAGGEINLL-----MKKHG 413 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 I E + + ++ A G Sbjct: 414 IPEGDIAVINTEAKKA-----------------------------------AYNDIHGND 438 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ--ERPLEEWLPV-CRDMLNAFFLP 601 + LA L+ +L+ L + V + Sbjct: 439 HVLEVIRRGGNSGVRKKAELAGLVRRLDKVITLAGSYSPGTLAYHIAVPLAGLFRNL--E 496 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP-VN 660 D + + L L L + + AG V Sbjct: 497 DGAGAEHLREACRLATE------YDLLDPRGGLDGLVGYLWAANSDKNLRSDADAGGAVE 550 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYP----RQLAPLGFDLMSQKPKRGDR--SRRDDDRY 714 + T+ + F V + + P + + L+ + +G ++R Sbjct: 551 VTTIHKSKGREFDAVFIADAVEDRLPLKYKGRKYQVPTTLLHGRRPQGKEKDRHMQEERR 610 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI---DYIGQSHYLPGDEALNCDE 771 L A+ A++ L I+Y +E PS ++E+ + + ++ G A Sbjct: 611 LLYVAMTRAKKNLCITYSKEYASKKTESKPSRFLEEMQFRSNPLVRTFVFAGGPAQGAGT 670 Query: 772 SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL--- 828 + + D A E++ + L Sbjct: 671 ASTVSGLQEEAMRAVSVGDHGTAVQKVTDLAALEYMKEHGGLDGFVPPAARSPSPGLGAG 730 Query: 829 -------PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQIN 881 P + + + P+ +F + + P P ++ G+ +++ Sbjct: 731 AGPAKPAPLRLSSTKIGTYKKCPLMYWFAHVMTI-------PSPPGIPMVMGGVI-HKVL 782 Query: 882 QQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF-WETQCQEMQQLADRVIACRQPGQ- 939 +++ +A + + G L Y + +E +E + + + Sbjct: 783 EKITDAQMNGQTPDEAGALAMLEGQLKYAVYDSRTSFEQSKEEAESMISWFVKWSAGSPN 842 Query: 940 -----SMEIDLACNGVQITGWLPQV------------QPDGLLRWRPSLLSVAQGMQLWL 982 + +L G + G + +V G + P ++ + L+ Sbjct: 843 KPIAVEKKFELEIAGAEFRGSIDRVERTPDGGLVLIDYKTGRTKVSPGKIAEDVQLNLYA 902 Query: 983 EH---LVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLL 1036 E L L + E+R + + A+ + + ++G REG P Sbjct: 903 EAAKKLYKELPEKAVLLYLESGETVEYRLDEASVKSAIGRIEEYVDGIREGRFDPTP 959 >UniRef50_C0R0K3 ATP-dependent DNA helicase n=2 Tax=Brachyspira RepID=C0R0K3_BRAHW Length = 665 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 61/494 (12%), Positives = 157/494 (31%), Gaps = 86/494 (17%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEF 358 + + G D +LS F + PD + + + + A I Sbjct: 244 QSIYAFRGADVSNILS----------FENEYPDAKIVTLTKNYRSTKAILEAAHSVISNN 293 Query: 359 SRSDNKRPLDPLDSSI--TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 ++ +K+ + + I T C + E + + D ++ L D V+ Sbjct: 294 TQRKDKKVVAEGEEGIPPTIMPCEDEREEAQFVADSIINY-SISKRLNYEDFAVLFRMNA 352 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 +F A R LPY + ++ ++ L+L + +L ++++ Sbjct: 353 Q-----SRLFEEAFRLRGLPYTVVGAFQFYERKEIKDILAYLNLFVNPEDEVSLLRVINI 407 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + I + L + ++G+ Sbjct: 408 P----KRGIGAVAINNLNEASIKNGV---------------------------------- 429 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE---WLPVCRD 593 ++++L Y+ + + + L ++ + ++ E Sbjct: 430 -----SLYETLLNYESMDDISPKAKAGIKDFLEVIDHYHNLFTVDKNALERPKLYENINK 484 Query: 594 MLNAFFLPDA-----ETEAAMTLIEQQWQAIIA-EGLGAQYGDAVPLSLLRDELAQRLDQ 647 L+ + +T+ + ++++ + L D + + Sbjct: 485 FLDVIAYHNEILNSSDTKEQGAKKMENVESLMNGILEYEKSNKNATLKNYLDRILLMSIE 544 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 E+ + + ++ + + F V + GM DG+ P Q + D + Sbjct: 545 EQNDDEDKKKGIMLMSIHAAKGLEFPYVYICGMEDGIMPHQKS-------------LDEN 591 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDE 765 +++R L A+ A++ L ++Y + + PSV ++E+ + + + +E Sbjct: 592 GLEEERRLCYVAMTRAKKHLTLTYCRSRTKMGKKVECTPSVFLEEMSANLPEEMAMNEEE 651 Query: 766 ALNCDESEARVKAH 779 + ++ R + Sbjct: 652 FFSNLKASLRPENK 665 >UniRef50_A4RXK7 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RXK7_OSTLU Length = 657 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 67/531 (12%), Positives = 143/531 (26%), Gaps = 75/531 (14%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIY 312 P + R + ++ + E +L VG+ A +G G + Sbjct: 192 PDVRSYYEHRWSQVLVDEFQDTSTTQYELIRKLSQPQGSVFVVGDADQAIYGWRGAEVAN 251 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS 372 + + + ++L + A A + F + P Sbjct: 252 IRTQFDED------FKDVQTHMLTTNYRSTATIVEAAQAVIKESAFPSPLDLVANTPGGR 305 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 + + + E E + ++EDP L +I V+ V A Sbjct: 306 DVAIVEANDDREEAEFIALEARKSVKEDPDLRYSEIAVLYRTNSQ-----ARVLEEAFIR 360 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +P+ + + ++ I+ L + + + + +++ P I + Sbjct: 361 AGVPHKVIGDTSFYGRKEIKDMIAYLRVVSNSADTVSLNRIINTP----TRGIGNSTIEK 416 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L W++ G +LP E Sbjct: 417 LSAWIDTLPKTDGT---------------------------------------ELLPSAE 437 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 GL + + R P E + + + DA+ Sbjct: 438 EMGLTTRARSAVLKFSQLMAETREKAKSSTPGELLEAIIKCTGYDTLVQDADDGNERWAF 497 Query: 613 EQQWQAIIA---EGLGAQYGDAVPLSLLRDELA--QRLDQERISQRFLAGPVNICTLMPM 667 Q+ + + + D V L L L L + V + T+ Sbjct: 498 VQELINLAKEPPQDIDETIQDRVGLEALGSFLEGISLLTSAESKEEEGGDTVKLMTMHAS 557 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F V + G+ +G+ P D +D++ LF + A++KL Sbjct: 558 KGLEFNSVFISGVEEGLIPFVRNGDSED------------DQDEEVRLFYVGITRAKRKL 605 Query: 728 YISYIGRSIQDNSERFP---SVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 + + + P S L+ + + S ++ Sbjct: 606 MLCHARERRRFGQSAQPARRSFLLDSISAMLTGSKKPERSVSIPSTSRGKA 656 >UniRef50_B3EU74 UvrD/REP helicase n=4 Tax=Bacteroidetes RepID=B3EU74_AMOA5 Length = 757 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 53/485 (10%), Positives = 140/485 (28%), Gaps = 76/485 (15%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR---SDNKRPLDPLDSSITFHVCHSP 382 F P+ + ++ + +N A I ++ N + I + Sbjct: 272 FEKDYPNLTIIKLEQNYRSTQNIVEAANGIIRNNQLQLKKNVWTANEKGEVIGLIRATTD 331 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 E ++ + + ++ L D ++ A LPY + Sbjct: 332 AEEGRLVAASIFEIKMQNQ-LRNEDFAILYRTNSQ-----SRAIEEALRKINLPYRMLGG 385 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + ++ ++ L + E + +++ P + I + + ++ GI Sbjct: 386 TSFYQRKEVKDLLAYLRFIVNHNDEEALKRIINEP----KRGIGPSNIEKMVVAASDHGI 441 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL-PYDESSGLIAELV 561 W+ + + SG +AE V Sbjct: 442 ---------------------------------------PLWEVMCNAKNFLSGRVAEAV 462 Query: 562 GHLASLLMQLNIWR---RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 A ++ + + + + + + + + + + +A Sbjct: 463 EEFAHMIQAMALDLTKKDAYEIASEIAKRSGLLKSLYEDKTVEGLARYENVQELLSGIKA 522 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 A L+ L ++ +++ T+ + + FK V ++ Sbjct: 523 FTANPEQVD----TSLATFLQ--DVALATNNENEEDGEDKISLMTIHAAKGLEFKYVYIV 576 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 G+ + ++P + G R +++R LF AL AQ+K+++SY + Sbjct: 577 GIEEDLFPSSM------------MLGSREDLEEERRLFYVALTRAQKKVFLSYTISRYRF 624 Query: 739 NSERFP--SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP 796 + S + E+ ++ + + + + + +Q Sbjct: 625 GKLKQCEVSRFIGEIDPVYLHMAHVTNSYTEKSNTNYTKQFISSMRITPQQKSVKVKFQA 684 Query: 797 GERQS 801 + S Sbjct: 685 YAQSS 689 >UniRef50_C1RHS2 Exonuclease V gamma subunit n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RHS2_9CELL Length = 543 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 117/518 (22%), Positives = 196/518 (37%), Gaps = 43/518 (8%) Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + L + L RL F G + +C+L PMR++P +VVCLLG++DG +PR Sbjct: 32 DVPLRLPDVVALLEPRLGGRPTRAGFRTGALTVCSLEPMRAVPHRVVCLLGLDDGAFPRA 91 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 AP G D++++ P G+R RR +DR LFL+A+ +A L + + G + + R P+V V Sbjct: 92 GAPDGDDVLARDPLVGERDRRAEDRQLFLDAVTAAGDHLVVVHSGADERTGAPRPPAVPV 151 Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER-----QSYA 803 EL+D + ++ + L H D +N+ PG S+ Sbjct: 152 GELLDAVDEAVAFAD---------GRTSRGALVVHHPLQTVDERNFAPGALGRPGPFSFD 202 Query: 804 REWLPAASQAGKAHS----EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRT 859 AA+ A PLP V L+ L HPVRAF + RL V Sbjct: 203 VVDRDAATVARGPRHPRPPLLTAPLPPLDDPVVDLDDLVAALEHPVRAFVRRRLGVLVPG 262 Query: 860 EDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAF-GEIFWE 918 E ++ D P L L + +LL A+++ D R R G +P G G + Sbjct: 263 EVDDLDDRLPLTLAPLDGWAAGDRLLAAVLDGVDLTRAAAAERRRGRVPPGNLGGAALAD 322 Query: 919 TQCQEMQQLADRVIACRQPGQSMEIDLAC-NGVQITGWLPQVQPDGLLRWRPSLLSVAQG 977 + P ++++ + +TG +P V D L+R + L Sbjct: 323 VATRVAAVAEAAAPVLGAPATTVDVTVPLPGDRTLTGTVPGVHGDVLVRAVYARLGAKHR 382 Query: 978 MQLWLEHLVYCA--SGGNGESRLFLRK-------DGEWRFPPLAAEQALHYLSQLIEGYR 1028 ++ W+ L A G + + P + A L++L+ Sbjct: 383 LRAWVRLLALAADPDGPPVRGAATVGRGPGTRPTAATSWLTPPEPDDARRLLAELVTVRD 442 Query: 1029 EGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGD-- 1086 + APL + + G + + + A D Q R ++ E +++ G+G Sbjct: 443 RALCAPLPLPVAAAGTYAHRRHGNDDPAGALAD-AEQALRDRYEHTDEYHVLAWGDGFTL 501 Query: 1087 -------DIWYQRLWRQLTPETMEAIVEQSQRFLLPLF 1117 + W ++ L Sbjct: 502 AAVAGEPTPADRAAWPDEPTLL----GALARTVWDALL 535 >UniRef50_C7M3I8 UvrD/REP helicase n=3 Tax=Bacteroidetes RepID=C7M3I8_CAPOD Length = 789 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 72/540 (13%), Positives = 156/540 (28%), Gaps = 76/540 (14%) Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWG 304 + Y + + + + + +N + D QD + Sbjct: 183 QEYVDRCFKAGAMDFDDLLLKTNELLNLYPDVLAKYQNRFRYILVDEYQDTNHSQYLIVK 242 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLH-----------NIQSDILELENRAVAGV 353 L + + + +Q + AF +N+L+ ++ + +N A Sbjct: 243 ALADRFHNICVVGDDAQSIYAFRGANINNILNFKNDYPEAKEYKLEQNYRSTKNIVEAAN 302 Query: 354 N-IEEFSRSDNKRPLDPLD--SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV 410 + IE K + I H + E + + + L + V Sbjct: 303 SVIEHNKIRLEKVVFTENELGEPIKVHRSPTDADEGRFVASSIFENKMQHQ-LPNGNFAV 361 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 + A R +PY I + ++ ++ L L + E + Sbjct: 362 LYRTNSQ-----SRAIEDALRKRDIPYRIYGGLSFYQRKEIKDMLAYLRLIINPNDEEAL 416 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 + +++ P I E + L + + + I + +LP +T + Sbjct: 417 VRIINFPA----RGIGETTMEKLT--LAANHYKKSIFEIMYNINKLPELHINTTTK--QK 468 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 + M E + +A+ G L Sbjct: 469 LTDFVVMILNFQALNQKANAFEVAEQVAKKTGLLQEFKK--------------------- 507 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIA--EGLGAQYGDAVPLSLLRDELAQRLDQE 648 E A M IE+ + EG LS + L + Sbjct: 508 ---------DGTPEGIAKMENIEEMLNGMKDFVEGQEDVADSRASLSEYLE--DVALATD 556 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 + V + T+ + + F V ++GM + ++P ++ R+ Sbjct: 557 MDKEIGDDDRVALMTIHLAKGLEFPYVYVVGMEEDLFPSAMSIQS------------RND 604 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEA 766 +++R LF AL A+++ Y++Y + + PS ++E+ + Q Sbjct: 605 LEEERRLFYVALTRAEKQAYLTYAENRYRWGKLSDAEPSRFIEEIDERYLQYLTPSISNP 664 >UniRef50_Q68WT1 DNA helicase II n=17 Tax=Rickettsieae RepID=UVRD_RICTY Length = 658 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 66/461 (14%), Positives = 145/461 (31%), Gaps = 81/461 (17%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---E 356 + +G G + +L F + ++ + A N+ Sbjct: 258 QSIYGWRGAEVGNILR----------FEKDFAGATIIKLEQNYRSTLPILAAASNVINNN 307 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + S I C S + E + + ++ + +I ++V Sbjct: 308 KNRHSKTLWTDSASGEKIKIISCLSDKEEARYIACEIDKLV-REERYHAGNIAILVR--- 363 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + F F A + +PY I + ++ + + ++ + + +++V Sbjct: 364 --AGFQTRSFEEAFINSAMPYKIIGGLRFYERMEIRDVLAYIRISLNQNDNLALERIINV 421 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + I L +R + E I Sbjct: 422 P----KRAIGAASLNKIRSYALERNI---------------------------------- 443 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 + ++ E+ A+ L LL +++ W + P+ + D Sbjct: 444 -----SNFVAIKEILETGIFKAKSYESLKDLLTKIDNWYEKFITDTPINVVKTILDDSGY 498 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 L + +TE A IE ++ + + + ++ E + + Sbjct: 499 LSMLQEEKTEEAFGRIEN-INEMLRAIAEFN-----DIHDFIEHSSLVMENEVLETNY-G 551 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 G V I TL + + F VV L G +GV+P Q + + + ++G +++R + Sbjct: 552 GSVTIMTLHAAKGLEFDVVFLPGWEEGVFPSQRS------LDEDGEKG----LEEERRIA 601 Query: 717 LEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYI 755 + A++ LYI++ PS + E+ D I Sbjct: 602 YVGITRAKKDLYITHAESRKIFYEIVHSCPSRFINEIPDEI 642 >UniRef50_B2A5W4 UvrD/REP helicase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A5W4_NATTJ Length = 726 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 59/528 (11%), Positives = 141/528 (26%), Gaps = 76/528 (14%) Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLDS 372 L + + F P+ ++ ++ + + A + +K D Sbjct: 247 LFRGADVKNILEFEKTYPNAQVYKLEKNYRSSKTILEAANQVVTNNPSRKSKELWTDNDE 306 Query: 373 S--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 + ++ + E + + + A I V+ V Sbjct: 307 GYPLQYYEADDERDEAYFIAEEIRA-----NRYQLPLIAVLYRTNAQ-----SRVLEDIF 356 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 + Y + ++ ++ L + + +++ P + I + + Sbjct: 357 RKMGISYEVVGGTGFYDRKEVKDIMAYLMVVQCPQSDSQLERIINEP----KRGIGKTSV 412 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 L+ + N + I T L + Y Sbjct: 413 DKLKDYANRNNI--------------------TLFDALLEV-----------------DY 435 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 + S V ++ R L +EE L A + + Sbjct: 436 TDISKRGKNSVKKFTDMIGNFRKMREYLTVRELIEEVAEK-SGYLEALRSQNTKEAETRM 494 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 ++ ++ E L + + + V + TL + + Sbjct: 495 ENVREIYSMAKEFEAEGGE---TLQEFLTH-STLMGDIDTWEDEEQAQVVMMTLHSAKGL 550 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 F V L G+ +GV+P + +++R L + A+Q LY++ Sbjct: 551 EFPGVFLTGLEEGVFPHIRTYDS------------EASMEEERRLCYVGITRAEQVLYLT 598 Query: 731 YIGRSIQDN--SERFPSVLVQELIDYIGQSHYLP---GDEALNCDESEARVKAHLTCLHT 785 + + PS V E+ + + + + + + S + ++ Sbjct: 599 WARERTLNGMTRMLQPSRFVSEIGEDLKDTQHQTLSGQGQVTSTQNSHEPPQTQISSFSD 658 Query: 786 RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP 833 + + +SY L + + G+ Q TV Sbjct: 659 KTSPSGKRNVNLAEESYQEGDLISHKKWGEGKVLQAQQAGSDWVLTVS 706 >UniRef50_C7RHP9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7RHP9_ANAPD Length = 731 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 54/460 (11%), Positives = 137/460 (29%), Gaps = 72/460 (15%) Query: 326 FVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHS--P 382 F D ++ + +N A + IE S +K + Sbjct: 264 FEKDFKDAETIKLEQNYRSTKNILETANLLIENNSERKDKELWTENKGGDRVIYKANSVE 323 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 E + + D + ++++ +D ++ P F L Y + Sbjct: 324 SEEAKFVLDNIKSLMQ--EGYDAKDFAILYRTNAQSRP-----FEEILMKNLLDYKVVGG 376 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 ++ +S L + + + +++ P + I + + L++ N I Sbjct: 377 LKFYDRKEIKDLVSYLKILVNPKDDLSLKRIINEP----KRGIGNKSIEELQRVANLHNI 432 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 +L + + + L D + Sbjct: 433 ----------------------------AILDLITDDS----FNTLISDRIKKSTEKFYL 460 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L + ++ + + + + D ++ I+ Sbjct: 461 PLREIFDNVDNY--------KIVDLIEDVLDKSGYMKSLESSYSVEDRARIDNINEFISS 512 Query: 623 GLGAQYGDAVP-LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 Q + + + L+ D ++ +++ T+ + + F VV ++G++ Sbjct: 513 ASEYQENNPEDNIYDYLENLSLLSDLDKT--ESTDNSISLMTMHAAKGLEFPVVFVVGLD 570 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 +G++P + + D +++R LF A+ AQ+KL++S Sbjct: 571 EGLFPGKRSI-------------DEGNIEEERRLFYVAITRAQEKLFLSSAEARRNYGKP 617 Query: 742 R--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 PS + E+ID I + + + + + + Sbjct: 618 VFYKPSRFIDEIIDNIKVEEKISSYGYSSREYEKTMAEDY 657 >UniRef50_Q67KI7 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67KI7_SYMTH Length = 825 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 80/610 (13%), Positives = 165/610 (27%), Gaps = 83/610 (13%) Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP------LL 300 Y ++ L + +R + + + D QD + LL Sbjct: 219 YQEQLRSGNALDFDDLLLKAVELLERFDDVREYYQRKFEYILVDEYQDTNHVQNRWVFLL 278 Query: 301 A----SWGKLGRDYIYLLS-DLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVN 354 A + +G D + S + F P ++ + +N + A Sbjct: 279 AGEKQNLAVVGDDDQGIYSWRGADISNILEFEAQFPGCRTIKLEQNYRSTQNILSAAYAV 338 Query: 355 IEEFSRSDNKRPLDPLD--SSITFHVCHSPQREVEVLHDRLLAMLEED----PTLTPRDI 408 + + KR + + E + + ++ E L +D Sbjct: 339 VRHNTGRKEKRLWTAAGPGDPVYHFTAADERDEAAFVAREVERLVAEGLPDGTRLDYQDF 398 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V+ A R +PY I ++ ++ L + + Sbjct: 399 AVLYRTHAQ-----SRALEEAMVRRSIPYGIYGGLRFFERKEIKDVLAYLRIIANPADIV 453 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 + VP + I + L + + + + + Sbjct: 454 SFRRAVGVP----KRGIGPATVDKLVDYAEQWQVPVALAALDCS---------------- 493 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 SG + + +L+ +L + ++ L Sbjct: 494 --------------------MVPGLSGTYQKRMEEFGALIEELTNLSAHCTVGQLIDAVL 533 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ-RLDQ 647 +L + AA Q+ +++ AE + L L LA L Sbjct: 534 ER-TGILEELRADTSLEAAARLENVQELRSMAAEFEPPAGEELDGLRDLDSFLATVALLT 592 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + V + TL + + F VV L+G+ +GV+P A D Sbjct: 593 DADQVGEGQNKVTLMTLHSAKGLEFPVVFLVGLEEGVFPHNRA------------LTDEV 640 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDE 765 + +++R L + A+ +LY++ + PS + E+ + + Sbjct: 641 QMEEERRLCYVGMTRARLRLYLTNAVSRNLWGQSNYNAPSRFLLEIPAELVEEVTPAAGA 700 Query: 766 ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA-SQAGKAHSEFVQPL 824 + + A + G R + REW S A A Sbjct: 701 SGPRRSAWDDGAAW---EDAGAAVRRPAWDGGARAARRREWEDDDFSPAIGAAGWGRTAQ 757 Query: 825 PFTLPETVPL 834 L + + Sbjct: 758 ARRLQKALEP 767 >UniRef50_B1I553 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria RepID=B1I553_DESAP Length = 718 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 81/621 (13%), Positives = 166/621 (26%), Gaps = 112/621 (18%) Query: 166 APLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA-----LP 220 L + + + + + A+ + L+ P P +F IS + Sbjct: 99 RILRREIEKLGYSKNFVIYDEADQQTVIKDCLKELNLEPRQHPPAMFSAAISWQKNALVG 158 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 P A + + L Y ++ L P+ Sbjct: 159 PAEF----AGAAYDQHQELTARVYAAYQARLERNNALDFDDLLFLAVRLFREFPPVLEQY 214 Query: 281 ENAGQLFNSDGEQDVGN---------------------PLLASWGKLGRDYIYLLSDLES 319 D QD + P +G G D +L+ Sbjct: 215 RRRFLHLLVDEYQDTNHAQYVLVNLLAQTHRNLTVVGDPDQCIYGWRGADLRNILN---- 270 Query: 320 SQELDAFVDVTPDNLLHNIQSDIL---ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITF 376 F PD + ++ + + A + + + Sbjct: 271 ------FERDYPDARVVKLEQNYRSTGRILEAANHVIRFNRHRKEKELWTARGAGEAPVL 324 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 H + E + + + + + RD V V +P Sbjct: 325 HQARDERAEARFVAREIRRLRAQ--GRSYRDFAVFYRTHAQ-----SRVLEDELLRHGVP 377 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 Y I ++ ++ L L + + +++VP R + + L + Sbjct: 378 YTIIGGVKFYDRKEIKDLLAYLKLIVNPDDDVALTRIINVP----RRGVGKASLVKFFAY 433 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 V ES + ++ D GL Sbjct: 434 VRESSV---------------------------------------ACADALREADRIRGL 454 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 A + + +L QL WR E + + +AE + Sbjct: 455 SAGVREAMGALGEQLARWRER---EGGVTGLTEQVLEESGYLTALEAERTVEARTRMENL 511 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 ++ L+ ++LA D +R + V + TL + + F VV Sbjct: 512 SEFLSVTREFDLQRGGTLAEFLNDLALYTDLDRFDGE--SSQVTLMTLHSAKGLEFPVVF 569 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 L GM +GV+P A + +++R L + A+++L+++ + Sbjct: 570 LTGMEEGVFPHTRA------------FSEPVEMEEERRLCYVGITRARERLFLTLAESRL 617 Query: 737 QDNSER--FPSVLVQELIDYI 755 + PS ++E+ + Sbjct: 618 LYGNVYYGVPSRFLREIPPEL 638 >UniRef50_C1ZAM6 DNA/RNA helicase, superfamily I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZAM6_PLALI Length = 845 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 84/664 (12%), Positives = 190/664 (28%), Gaps = 92/664 (13%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 +P L R R ++ + + L ++ G+P + +G G Sbjct: 203 NPNLRQSLDERYRFILVDEYQDTNQAQYQIVSALSQNEPNLCATGDPDQSIYGWRGAQIE 262 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLD 368 +L F P + ++ + A ++ ++ + R + Sbjct: 263 NILR----------FERDFPRVKMVRLEDNFRSTPEILAAADDLIRHNTQRKAKSLRTSN 312 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 P + +E + L + + D + + + Sbjct: 313 PSGLPVEIRQYADGFQEADSLAAEIRERVASGE-RQYSDFAIFYRVNS-----LSRSIET 366 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A +P+AI+ A ++ I+ L + ++ +++ PV I + Sbjct: 367 ALGRARVPFAITGGVAFYERTEVKDLIAYLRVIENPDDRPAFRRIVNTPV----RGIGKN 422 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L +W + W +V Sbjct: 423 SQEKLDRWASARN---------------------------------------LNLWDAVH 443 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 D S GL + L L+ R P+ E L V + Sbjct: 444 QIDASIGLPKKAEYSLKLFANLLDELARR--SHGPIAELLEVIVERTGYLQNLSGLEPEE 501 Query: 609 MTLIEQQWQAIIAEGLGAQYG--DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + + ++A + LS + + D + I AG V + TL Sbjct: 502 YANRKANVEELVASARQFDQDHVEGGSLSEFLETCSLVQDADTID--ESAGQVQLMTLHS 559 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F V L+G+ G+ P + + + GD + +++R L + A+++ Sbjct: 560 AKGLEFPCVYLVGVEHGLLPHERS----------LREGDPLQIEEERRLLFVGMTRAREE 609 Query: 727 LYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 LY+++ S + EL H D+ + + + T Sbjct: 610 LYLTWTRLRSTHGRLLSTIASQFLTELN---VARHDYSTDDDTSFGDWSPQEMRRGTSGD 666 Query: 785 TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHP 844 + + + ++S +++ +A + + + + P Sbjct: 667 SILAQMADWGEQARKESSNPSDKATSTEDDQA-----DLAEPGVDSQLFASSEED--TQP 719 Query: 845 VRAFFQMRLQ-VNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRA 903 F L+ + S T + + +++ + E + ++L R Sbjct: 720 RATFIDRVLESAVTPEDPSGHETTASQPVTSRNSRSFSKKKAPRVPEAERIDQLKSRLMT 779 Query: 904 AGDL 907 DL Sbjct: 780 GADL 783 >UniRef50_B1GYW6 ATP-dependent UvrD family DNA helicase PcrA n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYW6_UNCTG Length = 772 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 69/528 (13%), Positives = 150/528 (28%), Gaps = 74/528 (14%) Query: 326 FVDVTPDNLLHNIQSDILE---LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSP 382 F P+ ++ + + + A V S +P + S+T + Sbjct: 269 FEKDYPNAKSVKLEQNYRSTPKILSTANQVVKYNNARISKRLWTQNPDNGSVTVLKAVNE 328 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 E + + + + ++ D V F +PYAI Sbjct: 329 NDEAVKIAELIYSNAYDNK-CKFSDYAVFYRTNAQSRT-----FEDTFRLSRIPYAIVGT 382 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 ++ I+ L L + + ++++P R I + + L Sbjct: 383 LRFYDRAEIKDVIAYLKLIYNPNDNVSFKRVINIP----RRGIGKTSIETLEN------- 431 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 +A WQSV P+ + +GL Sbjct: 432 --------------------------------FAQLKNMSIWQSV-PFAQEAGLTKGPAE 458 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L S + + L ++ + +AE + + Q +I+ Sbjct: 459 ALNSFAQFIKDF-STLKNSGSVKLIVEKVITDSEYLKELEAENTPESKIKIENIQELISA 517 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + ++ SL L + S G V + TL + + F V + G+ + Sbjct: 518 VDDFEKNRSLDKSLAGYLTQIALMNDADSPDESKGKVTLMTLHLAKGLEFDNVFICGLEE 577 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS-- 740 G++P + +++R L + A++ LY+ + Sbjct: 578 GLFPMGESAFND------------KELEEERRLMYVGMTRARKCLYLCWSTERKVYGKII 625 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 PS + E ++ + T +H+ QN++ ++ Sbjct: 626 WNMPSRFIAE--AGFKDESAEMEQNRKQNFQNRLSQGFNRTIIHSDSFGREQNFRSFNKK 683 Query: 801 SYAREWLPAASQAGKAHSEFVQPLPFTL----PETVPLETLQRFWAHP 844 S+ E + + + S + E + + +HP Sbjct: 684 SFKAEIVYTNAGSYGYMSSGGEITKAERFDNPAEDLSPYKIGTAVSHP 731 >UniRef50_A0M3U3 PcrA-like UvrD/Rep family ATP-dependent DNA helicase n=28 Tax=Bacteroidetes RepID=A0M3U3_GRAFK Length = 787 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 73/647 (11%), Positives = 181/647 (27%), Gaps = 113/647 (17%) Query: 223 YLQALQALGKH----IEIHLLFTNP-----------------CRYYWGDIKDPAYLAKLL 261 Y Q + + I + F NP + Y + Sbjct: 151 YKQVYNRISSYKNSLITVKAYFQNPELQEADAMSKKPRLGEIYKAYVDRCFKAGAMDFDD 210 Query: 262 TRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ 321 + + +R + ++ + D QD + L + + + +Q Sbjct: 211 LLLKTNELLNRFPEVLHKYQSRFKYILVDEYQDTNHSQYLIVRALSDKFQNICVVGDDAQ 270 Query: 322 ELDAFVDVTPDNLLH-----------NIQSDIL---ELENRAVAGVNIEEFSRSDNKRPL 367 + AF +N+L+ ++ + + A + ++ + Sbjct: 271 SIYAFRGANINNILNFQKDYDNVQMYRLEQNYRSSKNIVEAANSIIDKNQTKLDKIVWTA 330 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + I + + E + + ++ + D ++ Sbjct: 331 NEDGPKIIVNRLLTDGEEGRYVASSIFENKMQNQ-MDNGDFAILYRTNAQ-----SRAME 384 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A + +PY I + ++ ++ L L + E + +++ P I + Sbjct: 385 DALRKKDIPYRIYGGLSFYQRKEIKDVLAYLRLILNPKDEEALKRVINYP----SRGIGQ 440 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + L N+ I ++ + Sbjct: 441 TTMDRLAIAANQHKI---------------------------------------SMFEVI 461 Query: 548 LPYDESSGLIAE-LVGHLASLLMQLNIWR------RGLAQERPLEEWLPVCRDMLNAFFL 600 D+ I L + + + + + + + +++ Sbjct: 462 KNIDKLELKINRGTQTKLVNFVNMIRSFAIMNETSDAFQIAETVTKKTGLVQELKKD--- 518 Query: 601 PDAETEAAMTLIEQQWQAIIA--EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 E A + IE+ + EG LS + L + + Sbjct: 519 GTPEGIARIENIEELLNGMRDFVEGQKELADATGSLSEFLE--DVALATDLDNDTGDDDR 576 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 V + T+ + + F V ++GM + ++P ++ RS +++R LF Sbjct: 577 VALMTIHLAKGLEFPYVYIVGMEEDLFPSGMSMN------------TRSELEEERRLFYV 624 Query: 719 ALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 A+ A+++ Y++Y + + PS ++E+ D P D+ + + Sbjct: 625 AITRAEKQAYLTYTLSRYRWGKLVDAEPSRFIEEIDDQYLDLMV-PQDDYKYKPLIDTDI 683 Query: 777 KAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 P++ P + E L + A +E + Sbjct: 684 FGDAVDKSKLRQTKPKSGTPPPAHKPSEEQLRKLRKLKPAATEPSKA 730 >UniRef50_Q88U40 ATP-dependent helicase/deoxyribonuclease subunit B n=3 Tax=Lactobacillus plantarum RepID=ADDB_LACPL Length = 1201 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 120/986 (12%), Positives = 261/986 (26%), Gaps = 182/986 (18%) Query: 12 VLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWD 71 + A + + + D F LV + I + + + Sbjct: 18 TMVAQLVATLMAKPQDQFF----YLVPNH---------------IKFDTEVDVLNRLAQA 58 Query: 72 MFVRVLPEIPKESAFNKQSMSWKLMT-----LLPQLLEREDFTLLRHYLTDDSDKRKLF- 125 L + F+ ++W LM +P+L LL L +D+ +LF Sbjct: 59 FGQPDLYAQTQVQVFSFTRLAWYLMKNEAAYQVPRLSAAGIDMLLYRILQRHADELRLFG 118 Query: 126 ----------QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEY 175 QL+ + +L Q +P+ + Q L A ++K V Sbjct: 119 GEISQTGFVTQLAREINEL--QTANLQPEDVVQLAANAQAGDLQAKLHDLAIVYKDFVAA 176 Query: 176 THQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKH-I 234 T A++ + L + V + G + LP + + + Sbjct: 177 TADKYLKP---ADILVQLNAYLRRQDLHGTHV--YVELAGFAQLPAQEQGIVTTMLEQGA 231 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 ++ + D + + Sbjct: 232 DVTISLM----------LDHKVVDRAPENGTLFY-------------------------- 255 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 + GR Y L +++ D+ + + ++ L++ Sbjct: 256 ----------QSGRLYYR-LYQYARIRQIPVSQDIYAETP--RVAPGLVALDDFWRGQPQ 302 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED-----PTLTPRDII 409 N ++ S Q E+ + + AM+ + RD + Sbjct: 303 AATGYEEPNT--------NVHLFRTDSRQTELAQVGRMIRAMVAKKHADPADDYHYRDFL 354 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 +M +D+Y + F +PY + +R+ HP++E +L + ++ D Sbjct: 355 IMTRHLDAYQTMLAPTFHEL----EIPYFVDLQRSMADHPLVELINALFDIDAQQYQYRD 410 Query: 470 VLALLDVPVLAAR-------FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 V+ +L +L + + ++ +SG G + + + Sbjct: 411 VMRVLKTELLMPNINGQPMDRQAYRQAVDLTENFILKSGYH-GQRWVQREDWQYFQLTEG 469 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 G+ V + + L + Sbjct: 470 D--AGVETDQNAEISRQINLIHHFVAETLPPFFKKMRQAPDGKAAVTLLVNFLTSQGVTD 527 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 L W A D A Q + ++ E + + ++ L Sbjct: 528 QLLAWRD------QALDRQDVRAAAEPEQTWQTFCGMLDEYVTILGAEPFEITDFLALLQ 581 Query: 643 QRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 + SQ V I ++S KVV ++G D V P ++ K Sbjct: 582 AGFEGASYSQIPSTLDQVLISESGMVQSQDHKVVFMVGATDLVMPDRIMTNNLLSDVDKE 641 Query: 702 KRGDRS---------------RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 + D+ L A +SA++ L+ S + Q+ ++ S Sbjct: 642 NLQLTLSSLDGDHYLNDSAVVQLGDESCLNYLAFLSARRHLFFSAPLKDDQE-TDLNWSN 700 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESEARV----------------------KAHLTCLH 784 V+ + + + Sbjct: 701 YVRRIQRQFNLREHTYLGTPDPTNADARPFVGTKRRTISHVIQVYRDVLTTNTDRNRVGA 760 Query: 785 TRMP------FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV--PLET 836 P Q + + AR+ + S + + + + Sbjct: 761 PLQPAPVWVWLRQQLTRDPQFGELARQLMAGLSYRNQPVKLTPASVEALYGHQIYTSISK 820 Query: 837 LQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER 896 L+ F+ + F + L++ R F L S + +L+ L++ +++ Sbjct: 821 LEEFYRNQYAYFLKYGLKLRERDV---------FELSAASTGEFFHAVLDGLIKALRSDQ 871 Query: 897 LFRRFRAAGDLPYGAFGEIFWETQCQ 922 + + L + + Q Sbjct: 872 IPLAQASDQQLGQ-YLETVTRQILDQ 896 >UniRef50_A9NHW3 DNA helicase II n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NHW3_ACHLI Length = 703 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 73/570 (12%), Positives = 181/570 (31%), Gaps = 102/570 (17%) Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN------P 298 Y ++ L + + D + +N D QD + Sbjct: 169 EKYTHELITNNLLDFDDLQILTYKLFDEHQHILEYYQNKFNFILVDEFQDTDHLQYKMMK 228 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDN---LLHNIQSD-------ILELENR 348 LLA GK L + Q + AF DN L++ +++ +L+L R Sbjct: 229 LLA--GKQ----KNLFVVGDPDQSIYAFRGANYDNAKFFLNDFKNEDGSKAEIVLDLNYR 282 Query: 349 AVAGVNIEEFS-------RSDNKRPLDPLDSSIT--FHVCHSPQREVEVLHDRLLAMLEE 399 + + R +K L + + S E +++ + + ++++ Sbjct: 283 STKEILKFANKLITSNKNRPFSKSLETDLGNGLKPFIWSAQSDLNEAQMIANEIETLIKD 342 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 DI ++ + + F +PY + + ++ ++ + Sbjct: 343 G-GYKYSDIAILYRN-----NALSRSFEDVFMKYNIPYVLYGGISFYQRKEIKDILAYIR 396 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 L + ++ +++ P R I L L+ + E + Sbjct: 397 LVVDPNLDFYLMRIINTP----RRAIGPTTLNKLQSYAKEHNM----------------- 435 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 + ++ +D S L+ +L++++ + Sbjct: 436 ----------------------SMFDAIDSFDISGKTKQSLLE-FKTLILEMKFDFQNFT 472 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAET--EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 + + +++ + N D + E + I++ + A Y L L Sbjct: 473 ELGKVVDYVAY-KTGYNQMLETDKDEYSEERIEYIKELKNPFVQ--AEAYYEGTF-LEKL 528 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 L Q + + ++ V + T ++ + FKVV + M + ++P + Sbjct: 529 MQLLDQIALYSDLDRNKVSDAVVLSTFHQVKGLEFKVVFMTVMEEQIFPSSQS------- 581 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYI 755 D + +++R + + A+++LY++ + + + PS ++E++ Sbjct: 582 -----FMDLNELEEERRIAYVGVTRAKERLYLTRSEKRLLYGALIYPRPSRFLKEMMPE- 635 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHT 785 + G+ S +K + H Sbjct: 636 QEVFTKKGNYTPQQSTSSNYLKPGDSVTHQ 665 >UniRef50_C7HU69 ATP-dependent DNA helicase PcrA n=2 Tax=Anaerococcus RepID=C7HU69_9FIRM Length = 729 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 54/449 (12%), Positives = 126/449 (28%), Gaps = 72/449 (16%) Query: 326 FVDVTPDNLLHNIQSDILELEN--RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHS-P 382 F D ++ + N + R + D S + S Sbjct: 264 FEKDFKDAKTIKLEENYRSTSNIINVANKLIKNNSERKEKNLWTSKNDGSEVLYKKSSVE 323 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 E + + D + ++L + +D+ ++ +F L Y + Sbjct: 324 SEEGKFVIDEINSLL--NDGYRLKDMAILYRMNAQ-----SRIFEEYLMKNLLDYKVVGG 376 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 ++ IS L + + + +++ P + I ++ + L + N+ G Sbjct: 377 LKFYDRKEIKDLISYLKILVNPKDDISLKRIINEP----KKGIGDKTVEKLEKEANKLGF 432 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 + V S L ++L Sbjct: 433 ---------------------------------------SLTELVCDPSLFSNLPSKLKS 453 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L ++ + E + D + I+ Sbjct: 454 SCEKFYNPLAEIFDNY-KDYDIVELIEEILDKSGYIRALEESYSVENRSRIDNLNEFISS 512 Query: 623 GLGAQYGDAVP-LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 Q + + + L+ D ++ + +++ T+ + + FKV ++GM+ Sbjct: 513 AAEYQSNNPEDNIHDYLENLSLLSDLDKTEDK--DDSISLMTIHSAKGLEFKVCFVVGMD 570 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 +G++P + + D +++R + A+ A +KLY+S Q Sbjct: 571 EGLFPSKRSI-------------DEGNIEEERRICYVAITRAMEKLYLSSAEIRRQFGQP 617 Query: 742 R--FPSVLVQELIDYIGQSHYLPGDEALN 768 PS + E+ I + Sbjct: 618 VYYKPSRFLNEVESSIKKIDQDKTPAYSP 646 >UniRef50_B5YHS6 ATP-dependent DNA helicase PcrA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHS6_THEYD Length = 699 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 44/432 (10%), Positives = 132/432 (30%), Gaps = 83/432 (19%) Query: 326 FVDVTPDNLLHNIQSDILELENR-AVAGVNIEEFSRSDNKRPLDPLDSSITFHVC--HSP 382 F PD + ++ + ++ + I + K D C ++ Sbjct: 266 FEKDFPDTKIVKLEQNYRSTKHIILASSAMISRNTMRKPKILWTERDWGEKIFYCQLNNE 325 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + E + + + + + +D ++ + A +PY + Sbjct: 326 EEEAKYIAKNIKELYLKGD-YEYKDFAILYRLV-----LQARALEEALRMEGIPYQVISG 379 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + ++ ++ + ++ + ++ +++ P I + + + I Sbjct: 380 VSFYHRKEIKDVLAYMRFILNKEDNVSLMRIINTPP----RGIGASAISKIESEAKKYMI 435 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 ++++ + + A L Sbjct: 436 ---------------------------------------STFEAIKRIIKEDTVSATLKE 456 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L S + ++ + ++ + +D+LN + E + + + + Sbjct: 457 KLVSFVTLIDELSE-----KDYKDAASMIKDILNFTGYLEEIEEDRIQNVLEFLSSA--- 508 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + +P+ D++A + + V++ TL + + F VV + G + Sbjct: 509 -------EKMPVREFLDKVALFSNVDTW--ENKKNYVSLLTLHAAKGLEFPVVFIAGCEE 559 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS-- 740 G+ P A D ++R LF + A+ L+I+ + + + Sbjct: 560 GILPYFKA------------LEDPFELQEERRLFYVGMTRAKNLLFITSVKQRKLYSKVQ 607 Query: 741 ERFPSVLVQELI 752 ++ S ++++ Sbjct: 608 KQETSSFIKDIP 619 >UniRef50_B9EAN7 ATP-dependent nuclease subunit B n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EAN7_MACCJ Length = 1118 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 78/688 (11%), Positives = 169/688 (24%), Gaps = 76/688 (11%) Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 + + S ++ I S E + +++ ++ + Sbjct: 264 NMHVSYRFNDELNMLENSFSREVSISHTEHIHLSQHASVPAEAAHIAHKIMDLVRKGE-- 321 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 +DI+V+ D I +PY + H +E SLL + Sbjct: 322 RFKDIVVLYRDESYVKQLI-----DVCRKHQIPYHTDYKELMIHHKAIELIRSLLDAFKT 376 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGL--RYLRQWVNESGIRWGIDDDNVRELELPAT-- 519 E + L ++A F E+ L L + E G+ + + Sbjct: 377 NMRMEHLFRALKTGLIAHEFKREEDLLLIDMLENVMIERGMYYDDLIHKRKLFYDEKDVY 436 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 Q W L + + P+ E + + + ++ Sbjct: 437 EQDQWDALLQYI---------DYLLSVIEPFKERIVNAQSG----RAFASAIYSFMLSIS 483 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 L + + +D + I ++ + + + ++ D Sbjct: 484 LPEYLMQHKDMAKDNGEQYIALT------FDQILTGLNQVLDDFVLIMDEVTLDYKVMCD 537 Query: 640 ELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 + + + I L + K V + G+ND + PR + Sbjct: 538 IIDVGFLALEYNAPPQGLDQIQILNLDLAKVENKKYVFVCGVNDDILPRPMKEDALITDQ 597 Query: 699 QKPK----------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 +K D+ ++F A+ AQ +YISY ++ PS + Sbjct: 598 EKRMMQEIGDIQLAPTTDVLIQDEWFVFYNAVTHAQHSVYISYSLMNMNQ-EAMRPSRYL 656 Query: 749 QELID--YIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW 806 L ++ +C + H H E Sbjct: 657 ARLERQLHLEVQDMTLDMNPEDCITTYHAGIKH-AVSHIEDDTWSDVVAVYETDPQFEHV 715 Query: 807 LPAASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 ++ + +T+ + + F + F L++ R Sbjct: 716 FKLRHYRNQSEMLAEHEVSRLYGDTIKASVSRFETFNQCAFKHFANHGLRLKERLPYQFQ 775 Query: 865 P-DTEPFILEGLSR--YQINQQLLN--ALVEQDDAERLFRRFRAAGDLP-------YGAF 912 + L + Q+L A V + + + + Y Sbjct: 776 SFQLGNIFHDALRHLSEKFKDQVLQVDAAVIASEIDDYLKASLPSVHYEVLYSKHYYQYI 835 Query: 913 GEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG--------------VQITG---W 955 + + + E G ++ITG Sbjct: 836 VKQIRTILLSTFTAIQRQTKYSNFKMARFETKFGKGGALDTQIYRFGKNKKIEITGQIDR 895 Query: 956 LPQVQPDGLLRWRPSLLSVAQGMQLWLE 983 + + R Q + Sbjct: 896 IDILPSPEKDYVRIIDYKSRQTDLDLKQ 923 Score = 53.2 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 73/242 (30%), Gaps = 47/242 (19%) Query: 9 RLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASF 68 + + ++ ++ + L DP +++ Q ++ LS Sbjct: 14 KTHEIIERIKSQLKGQPLGDPI---IMIAPRQSTFQ-IEQALSH---------------- 53 Query: 69 IWDMFVRVLPEIPKESAFNKQSMSWKLMTL-----LPQLLEREDFTLLRHYLTDDSDKRK 123 ++ + + ++ + W+L + L + L L + D+ K Sbjct: 54 -----DAMIKGSMRTAIYSFDRLFWRLESEEGSTKLQHISNSGVEMLTYQILNEHKDELK 108 Query: 124 LFQ-------LSSKAADLFDQ---YLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALV 173 FQ S K A + + Y V D V + ++ AL Sbjct: 109 RFQSTSAYFGFSQKMAAVISELKKYNVTPSDVYTLLGKEMDV-RTKDKLHDIYEVYTALE 167 Query: 174 EYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKH 233 E + + +E++ T ++I G V +Q+L +H Sbjct: 168 EKMSGQYMQTED---MLVALCKMIETSKTIRNA---DIYIDGFYNFTTVEYMVIQSLAQH 221 Query: 234 IE 235 + Sbjct: 222 AK 223 >UniRef50_B4VQT2 UvrD/REP helicase subfamily n=6 Tax=Bacteria RepID=B4VQT2_9CYAN Length = 1139 Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats. Identities = 63/447 (14%), Positives = 132/447 (29%), Gaps = 68/447 (15%) Query: 328 DVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNK--RPLDPLDSSITFHVCHSPQR 384 + + ++ + EN A IE+ ++ +K RP L I H Sbjct: 686 PDETTHTMVKLEENYRSRENILQAANYLIEQNTQRIDKILRPTRGLGEVIYCHHADDELE 745 Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E + ++L + +++P L ++ P A R +PY I Sbjct: 746 EAHFVVQQILKLNQQNPELGWGSFAILYRTNAQSRPL-----EDALRGR-VPYVIIGGLK 799 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 ++ ++ L + + +L +++ P R I + + L E G Sbjct: 800 FYDRKEVKDALAYLRTIANPSDTVSLLRIINTP----RRGIGKATIDNLVLAAQELGTP- 854 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 + + +G A+ V Sbjct: 855 -----------------------------------LWEIIRDETSVNTIAGRSAKAVNRF 879 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 A L+ Q L ++ + + + + I + Sbjct: 880 AQLIKQCQENTENLKAVEIIKFIMEE-SGYTDDLKNQGTDEAENRLANIHELYNAIVQFQ 938 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 ++ L LA LD Q+ V++ TL + + F VV L+G+ G+ Sbjct: 939 EENEDTSLEGFLANASLASDLDNLEDGQQ----AVSLMTLHSAKGLEFPVVFLVGLEQGL 994 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SER 742 +P D +++R L + AQ++L++++ Sbjct: 995 FPHNRTID------------DPVALEEERRLCYVGITRAQEQLFLAHARERRLYGYREPA 1042 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNC 769 S + EL + + S + + Sbjct: 1043 VRSQFLDELPEDLISSTLVKVKQQTPP 1069 >UniRef50_B7C8B0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8B0_9FIRM Length = 725 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 71/536 (13%), Positives = 151/536 (28%), Gaps = 93/536 (17%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYI 311 + +L + + + VG+P + G Sbjct: 206 VKEKWQNRLDYIHVDEFQDVDPIQYGII---KLLTGKNTHLCVVGDPDQTIYTWRGASVD 262 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS---DNKRPLD 368 +L F + + + A + ++++ + Sbjct: 263 IILK----------FNKDFEPCKTVILNENYRSTQPILDASNAVIKYNKERIDKDLYTKL 312 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 P D IT E + ++ + L +D+ ++ + F Sbjct: 313 PGDEKITMFEGKEDSEEPIFVARQINEKHK--KGLEYKDMAILYRS-----NYSSRAFER 365 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV--------SEDVLALLDVPVLA 480 +PY I ++ + L L +R VL +++VP Sbjct: 366 IFKSVGIPYVIYGGIRFYERQEIKDALCYLRLCTNRNEEDPDQMALDLAVLRVINVP--- 422 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 R I + L++ E + Sbjct: 423 -RRGIGARTIENLQKQAAERHM-------------------------------------- 443 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + + S + + L+ L R A E L+ L ++ Sbjct: 444 -NLYDVMKDPIGLSTAVTKKCEMFVDLIEDLRENREHYALEDFLDYVLDT-TGYISMLKE 501 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 + + +++ + I + + L ++A D+ Q V+ Sbjct: 502 DRESGQDRIDNLKELKEDIAQSMIE---DPEMTLESYLQDIALFTDKT---QETSENTVS 555 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + T+ + + F V L+ NDGV+P A G +++R L A+ Sbjct: 556 LMTVHAAKGLEFDTVFLVNFNDGVFPSSRACD----------EGGMKALEEERRLLYVAM 605 Query: 721 ISAQQKLYISY-IGRSIQDNSERFPSVLVQELI-DYIGQSHYLPGDEALNCDESEA 774 A++ LYI++ G S ++ + PS E+ +YI Q + S++ Sbjct: 606 TRAKKTLYITWNTGFSYMQDAFKTPSRFRAEIPMEYIVQEEKEEAPKQPKAVVSQS 661 >UniRef50_C5BBB0 ATP-dependent DNA helicase Rep, putative n=2 Tax=Edwardsiella RepID=C5BBB0_EDWI9 Length = 726 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 83/539 (15%), Positives = 154/539 (28%), Gaps = 75/539 (13%) Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLS-DL 317 + R + L + ++ + VG+ A + +G D + S Sbjct: 246 RRDPEVRERWQQRIRYLLVDEYQDTNTSQYELVKLLVGSR--ARFTVVGDDDQSIYSWRG 303 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDP--LDSSI 374 Q L + P + ++ + + A + I KR + Sbjct: 304 ARPQNLVLLKEDFPALQVVKLEQNYRSSQRILKAANILIANNPHVFEKRLFSELGYGEPL 363 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 ++ E E + L+A T D ++ VF Sbjct: 364 KVITANNEDHEAERVVGELIAHHFIHKT-AYSDYAILYR-----GNHQSRVFEKMLMQNR 417 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +PY IS + S ++ +S L + + L +++ P R +I L+ L Sbjct: 418 IPYKISGGTSFFSRAEIKDLLSYLRVLTNPDDDSAFLRIVNTP----RREIGPSTLQKLG 473 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 W N+ GI + ++ GL + L G Sbjct: 474 AWANQRGIS---------------LFRASFDVGLEQTLSG-------------------- 498 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEW----LPVCRDMLNAFFLPDAETEAAMT 610 + L ++ R ++ L E M Sbjct: 499 ----RGLASLQHFTRWMDELSRLCERDATAAVRDLIHGIDYESWLCETSASPRAAEMRMK 554 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 + Q + + G+ + + L+ + + R ER A V + TL + + Sbjct: 555 NVNQLFGWMTDMLQGSDLDEPMTLTQVVNRFTLRDMMERGESEEEADQVQLMTLHASKGL 614 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 F V L+GM +G+ P Q + D D++R L + AQ+ L + Sbjct: 615 EFPYVYLVGMEEGLLPHQSSI-------------DEDNVDEERRLAYVGITRAQKALVFT 661 Query: 731 YIGRSIQDNSERF--PSVLVQELI-DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 Q PS + EL D + + A+L R Sbjct: 662 LCRERRQYGELMRPEPSRFLLELPQDDLSWESARKVVSPQERMQRGQSHLANLKAQLAR 720 >UniRef50_C1ZKV9 DNA/RNA helicase, superfamily I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZKV9_PLALI Length = 680 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 57/470 (12%), Positives = 141/470 (30%), Gaps = 73/470 (15%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDIL-ELENRAVAGVNIEEFSRSDNKRPLDPLDS-SIT 375 + + F P + ++ + +A + KR + S+ Sbjct: 257 AEVKHILGFKQSFPAAKVVRLEDNYRCTESIIQLANQLVAHNRGRHEKRLIAHRGGTSVV 316 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 F Q E E + + ++ + + P +I ++ + +F + + Sbjct: 317 FREYPDEQAEAEGVVRDIAYLIHQL-NVRPCEIAILFRTNEQ-----PRIFEHELRRKQI 370 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 Y I ++ ++ + L + + +L +++VP I + L Sbjct: 371 HYRIVGGQSFFDRKEIKDLQAYLKVLVNPRDDLSLLRIINVPP----RGIGDATCERL-- 424 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 L A++ + W + + Sbjct: 425 -------------------------------------LARAVKEKRRFWDVIPDAAAAGE 447 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA--------ETEA 607 + ++ + +L Q++ R Q + M+ E + Sbjct: 448 ITSKALNNLRQFEKQMSGLREAFKQPGV--KLSETFLRMVETTGYAREIERTYKSAEQQE 505 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 LI ++ +++ L DE++ +R + + TL Sbjct: 506 MRNLILGEFANAVSQYEAQSRSP--SLEGYLDEISLGGSDFAAPERPDENAITLMTLHSA 563 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F+ V L+G+ +G+ P + + + + S +++R L + A+ L Sbjct: 564 KGLEFERVYLVGLEEGILPHKRSVD--------EEFENPSSVEEERRLCYVGITRAKDFL 615 Query: 728 YISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 I+ ++ +R PS ++E+ I + G S Sbjct: 616 TITRSQSRVKWGKKRETKPSRFLKEMRTAIETTAAPEGAGIDTAARSRTT 665 >UniRef50_Q28NL8 ATP-dependent DNA helicase, Rep family n=11 Tax=Rhodobacteraceae RepID=Q28NL8_JANSC Length = 817 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 62/549 (11%), Positives = 143/549 (26%), Gaps = 76/549 (13%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL---ELENRAVAGVNIE 356 + +G G + +L F P + ++ + + A + Sbjct: 277 QSIYGWRGAEVGNILR----------FEKDFPGAHVVRLEQNYRSTGHILAAASGVIAGN 326 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP---RDIIVMVA 413 + E + + + AM + + P I ++V Sbjct: 327 TGRLGKTLWTDGEDGEKVRLIGHWDGDEEARWIGEEIEAMGKGTRGMEPIGPNSIAILVR 386 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 + F LPY + + ++ + S + Sbjct: 387 -----ASHQMRAFEDRFLTIGLPYRVIGGPRFYERMEIRDAMAYFRVVVSPDDDLAFERI 441 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD----DNVRELELPATGQHTWRFGLT 529 ++ P + + ++ + +++ +G+ + T GL Sbjct: 442 VNTP----KRGLGDKAQQTIQRMARSNGVSLLEGARLCVETQAIGGKGGRELRTLVDGLA 497 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH--LASLLMQLNIWRRGLAQERPLEEW 587 R + L +++ + H LA +++ + + ++ E Sbjct: 498 RWRIQLTGALRAAGPSDDLIEEDADPSEVPKISHIELAEIILDESGYTSHWQNDKTPE-- 555 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 + + + + L + ++ +D Sbjct: 556 --------------GPGRLENLKELVKALENF------------ENLQGFLEHVSLIMDN 589 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 E+ Q V + TL + + F V L G DG++P Q + M + + G Sbjct: 590 EQDDQEP---KVTLMTLHAAKGLEFPAVFLPGWEDGLFPSQRS------MDESGQAG--- 637 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDE 765 +++R L + A++ IS+ G + PS + EL + + PG Sbjct: 638 -LEEERRLAYVGITRAEEVCTISFAGNRRVYGQWQSQMPSRFIDELPEDHVEVLTPPGLY 696 Query: 766 ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 S + + S L A Sbjct: 697 GHQGSVSATASP--VEREMAGSNLHEKAASADVYNSPGWRRLQARQGQYGTRQPSEAKAM 754 Query: 826 FTLPETVPL 834 E + Sbjct: 755 TIDAEAISA 763 >UniRef50_C8PVF1 Putative exoribodeoxynuclease V, gamma subunit n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PVF1_9GAMM Length = 1524 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 93/457 (20%), Positives = 165/457 (36%), Gaps = 128/457 (28%) Query: 1 MLRVYHSNRLDVLEALMEFIVERER-LDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML + SN++D L + + FEP ++V S M +WL+ ++ K GI+ Sbjct: 1 MLTIIQSNKVDKLFDHLLNAYKNPSYQGSIFEPFQVIVPSKVMGEWLKKQVADKAGISTL 60 Query: 60 IDFPLPASFIWDMFVRVLP------------EIPKESAFNKQSMSWKLMTLL-------- 99 + + + RVL ++P+ + +K M W++ L Sbjct: 61 VTTEFWGRYFLGLMQRVLRTYARISEDDDILDVPEVAMLSKNVMQWQIFGYLTQYRQAIV 120 Query: 100 --------------------------------PQLLEREDFTLLRHYLTDD--------- 118 P +++ + + L++D Sbjct: 121 EQPQHPLYPFLSPLVEDKEADSPNTTGFAPDTPAIVDSLSWANNQSLLSNDVISQSADLQ 180 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV----------------------- 155 + ++++QL+S A++ ++Y+ YRP WL+ W V Sbjct: 181 TQDQRIWQLASDMANMLNRYMTYRPQWLSNWGQDKPVAVSDMIAKKDALHNRLNGRDASN 240 Query: 156 ---------EGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTC--- 203 E + +A Q LW+ L + R L+ +F + L + T Sbjct: 241 AIDTPDWLVEHYEQLEAAQRFLWRQLFDD------DYRFREQLHNQFWQALNHSDTRIRN 294 Query: 204 --PPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLL 261 LP VF+ + LPP L LQ LG ++ +L NP +W DI D +L ++ Sbjct: 295 ISRSKLPKHVFLFTLQQLPPTELLDLQRLGVLTDVTILHFNPSEQFWADIVDKNWLMQMQ 354 Query: 262 TRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ 321 E+ ++ +D G+ LL+ +GK R+ +L+ L ++ Sbjct: 355 M------------------EDDASKHDAWYLKDYGHTLLSRFGKQSREVFAMLASLSGNE 396 Query: 322 ELDA-----FVDVTPDNLLHNIQSDILELENRAVAGV 353 F + P+ LL IQ DIL LE A Sbjct: 397 YEHVLWQDDFDNTPPNTLLEFIQHDILMLEEVATTAK 433 Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 127/686 (18%), Positives = 252/686 (36%), Gaps = 81/686 (11%) Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP- 401 L + + + K PLD+SI HVCHS R++EVL ++ L Sbjct: 488 LYKAIKDKLKQESNKQLENVEKWRPKPLDTSIAIHVCHSMVRQLEVLRSMIIGWLNYSDM 547 Query: 402 -------------TLTPRDIIVMVADIDSYSPFIQAVFGSA--PADRYLPYAISDRRARQ 446 DI+V++ DI+++ I+A F LP ++ A+ Sbjct: 548 QATPAQIPTDPWDRRALSDILVLLPDIETHQNIIEATFPKHVGGDGYQLPAKVTGVVAKD 607 Query: 447 SHPVLEAFISLLSLPDS---RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 + + +A +L + RF +V L + L F + E + + ++G Sbjct: 608 INLLWQAITGYYTLLNRAGARFQRSEVFDWLMLAPLYESFGLNLEQMTRACDLLTQAGFI 667 Query: 504 WGIDDDNVRELELPATG--QHTWRFGLTRMLLGYAMESAQ-----------GEWQSVLPY 550 G D+ ++++ A ++T+ + L R++ G M A G + +P Sbjct: 668 RGFDELHLQQTLSAADDDYRYTFAYALERLVAGVMMPKATVVSFGEYTNSFGVVEKFVPL 727 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA--- 607 + A++V L + L+ R + L +WL ++ F +T A Sbjct: 728 TNLTMADADIVAVLCDIYETLDDNRHLGNDVKTLPDWLTQIEKLIQQKFSLFNQTNAWRA 787 Query: 608 ---AMTLIEQQWQAIIAEGLGAQ-------------------YGDAVPLSLLRDELAQRL 645 A +++ +A + + L+ + + +AQ + Sbjct: 788 IFAAQNDLKENIEANSKYLATVKIKTAKNPNPATEPVQQIDTENLPLKLTFVLENIAQSI 847 Query: 646 DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM-SQKPKRG 704 +++S +G + + +RS+P+K+V +L +N +P+Q ++LM + P RG Sbjct: 848 INQQVSAEP-SGVITFARIGSVRSLPYKLVVMLNLNLSEFPKQEQQNRYNLMQAGLPIRG 906 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 DR R DDD FL+AL+ A+Q +I Y G+S D E P+ VQEL+D++ Sbjct: 907 DRFREDDDLGAFLDALLCAKQACWIFYNGKSTTDTHEHLPASPVQELLDFLQNRMASDDV 966 Query: 765 EALNCDES------------------EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW 806 ++ E VKA+L H +PFD ++ + + + Sbjct: 967 IIDPNNDQNSLSNNSQNPPNPQSTNFEQWVKAYLVTHHAALPFDKSYFELPQTEHKDKGI 1026 Query: 807 LPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 S +Q +L + + L + P + + + + + S P Sbjct: 1027 QSPEQINDDRVSADLQQTTASLNQQIKLSKTALYP--PAKIWHNLYTALQDKEATSTQPI 1084 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 + + + L+ + Q L + + + + G + + Sbjct: 1085 VQVWDTKQLTEWLSQWQQLKQRLSDMPEQSQQHYVNLSKIV--GNLADPAKAFVKAQNIA 1142 Query: 927 LADRVIACRQPGQSMEIDLACNGVQI 952 +A + + D + + Sbjct: 1143 IAAQGDNDSGGNDRNDNDNEFESLTL 1168 Score = 72.5 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 53/168 (31%), Gaps = 17/168 (10%) Query: 964 LLRWRPSLLSVAQGMQLWLEHLVYC---------ASGGNGESRLFLRKDGEWRFPPLAAE 1014 L + P+ +Q WL HL + A +G S P + E Sbjct: 1356 WLNYLPTSGKEKYLLQFWLHHLCWQVLRRTTAQQAQLNDGFSLWQFSNKKTVYLPAIPCE 1415 Query: 1015 QALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQA 1074 QA YL ++ Y+ S ++ P A+ + Q ++ + +L+ Sbjct: 1416 QACGYLQDIVMVYQLIDSVVTILPP----AFCLSFLQKQ---QKQPEAPASQHLGDWLKD 1468 Query: 1075 YEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRF-LLPLFRFNQ 1121 N + + D +Q L P + + P+ + Sbjct: 1469 SNFNFVDVNQFDYPIWQHLIGDYKPSVVIGFAQTLGALIYEPMLSMVK 1516 >UniRef50_B2S250 Rep helicase, single-stranded DNA-dependent ATPase n=4 Tax=Treponema RepID=B2S250_TREPS Length = 657 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 60/462 (12%), Positives = 135/462 (29%), Gaps = 61/462 (13%) Query: 326 FVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLDSS--ITFHVCHSP 382 F P ++ + A A I ++ K DS I + Sbjct: 252 FEKDFPYATEITLEQNYRSTGTILAAANGVIAHNTQRKEKALWSGNDSGKPIEIFNPETE 311 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + E + + +LA + + V++ + +PY +S Sbjct: 312 RDEAIFIANTILAEQIR-ASYSFSSFGVLLRTNSFMR-----IIEDVFLQENIPYRVSGG 365 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + ++ +S L + + ++L +++ P R I ++ L + N Sbjct: 366 MSFFQRKEIKDVLSYLRVISNPDDDVNLLRIINTP----RRGIGKKTLHLVSDIANTQQC 421 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 + + + + R + L Q + L Sbjct: 422 SVFNALNQIINKTHAVDLKESHRTAVENFL------------QLITQARTHLLSGKNLAY 469 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 + + + ++ F + IE ++I Sbjct: 470 KVRKFVEDI-----------------QYFNYLIQEFQKNEHAARFKFLQIEHLVESIEHW 512 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 Q + L + + L Q+ G V++ T+ + + F VV + G+ Sbjct: 513 ---EQSSEHGSLYDYLNRVT--LLARDNVQKETEGAVSLMTIHASKGLEFPVVFIAGVEA 567 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS-- 740 G P + + +++R LF A+ A++KLY+++ + Sbjct: 568 GTIPHERSIEEV------------HSIEEERRLFYVAITRAKEKLYLTHCRTRKRGGKRE 615 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 ER S + E+ ++ ++H G + L Sbjct: 616 ERTASPFLDEIPKHLVRAHAPEGKISEEEVTRAFTRIKKLFT 657 >UniRef50_C8WV10 UvrD/REP helicase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WV10_ALIAD Length = 705 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 60/490 (12%), Positives = 128/490 (26%), Gaps = 80/490 (16%) Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAV 350 VG+ A + G D ++L F PD + + + + Sbjct: 242 LCAVGDADQAIYAWRGADSEHMLR----------FERDFPDAKIVVLTRNYRSTQEILDA 291 Query: 351 AGVNIEEFSRSDNKRPLDPLDSSIT--FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 A I R K E + + + + D Sbjct: 292 ANSVIAHNPRRRPKELRSTRGHGDKPLVVRLPDGAAEAHYVAEAIEEHVRN--GGRYEDC 349 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V+ + +R +PY + ++ ++ L + + Sbjct: 350 AVLYR-----ANAQSRAIEEKLLERAIPYTVVGGMTFYDRREVKDVLAYLRVLVNPQDEI 404 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 +L +++ P + + + + L ++ + G+ Sbjct: 405 SLLRIINRP----KRGLGDTAVDRLLEFAHAEGMS------------------------- 435 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 L + E +GL L + E Sbjct: 436 ---------------LYEALAHGEEAGLSERTAEAARQFHASLQELALWMEGMAVSEFLA 480 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 V ++ + + +E + + ++ E+ L Sbjct: 481 EVLHATRYREMYLESGKKEDLARVEN-IDELFSVTRSFDERRGGTVAEFLAEV-SLLSDI 538 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 + G V + TL + + F VV L+GM +G++P + D R Sbjct: 539 DKERDRGKGSVRLMTLHASKGLEFPVVFLVGMEEGLFPHARSMD------------DPLR 586 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEA 766 +++R L L A +L +++ R PS + E+ + + L Sbjct: 587 IEEERNLCYVGLTRAMDRLVLTHAAWRTLYGQTVAREPSRFLAEIREDLVVRVDLAEALE 646 Query: 767 LNCDESEARV 776 RV Sbjct: 647 PEVLRPGDRV 656 >UniRef50_B0MU18 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B0MU18_9BACT Length = 813 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 65/484 (13%), Positives = 151/484 (31%), Gaps = 55/484 (11%) Query: 321 QELDAFVDVTPDNLLHNIQSDILELENRAVAGVN-IEEFSRSDNKRPLDPLD--SSITFH 377 + + +F P+ ++ ++ + A + IE S+ K+ D I Sbjct: 268 ENILSFKKDFPNAMIFKLEQNYRSTRTIVEAANSVIERNSKRMEKKCFSEGDMGEKIRVL 327 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 ++ + E E++ L + + ++ + A + +PY Sbjct: 328 RAYTDREEAEMVVSDLRDKVRA-AGDEWAEAAILYRTNNQ-----SQALEDALRRKGIPY 381 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 I + H ++ ++ + L + E +++ P I + + + Sbjct: 382 RIYKGNSFYDHKEIKDLLAYIRLVINPRDDEAFKRIVNYPA----RGIGDTTVERIALLA 437 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 + + V L + + ++ A+ ++ + I Sbjct: 438 KARNLSM---WEAVDALTAEPVTDPVQKTIVRKVAEFVALVRGLSLARAEKGLYDLGLEI 494 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 A G + +R E L ++LN+ L + + EA + Sbjct: 495 ATRSG-------IIGAYRAENTPEATSA--LDNIEELLNSMQLFNEQREAEIR------- 538 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 Q + + + D ++ + V + T+ + + +K V + Sbjct: 539 -----AGERQQEERATIEEWLQGVMLMTDMDKDDPQ-DRNKVTLMTVHSAKGLEYKFVYI 592 Query: 678 LGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ 737 +G+ + ++P Q A D +++R LF AL A++ +SY + Sbjct: 593 VGLEENLFPSQRAVESPDGF------------EEERRLFYVALTRAKELATLSYAEMRFK 640 Query: 738 DN--SERFPSVLVQELI-DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 PS ++E+ Y+ E + + L L R FD + Sbjct: 641 WGNMEFSRPSCFLREIDSRYLETDAMQEEREPVRRSAGRGEGSSALDELRRR--FDYRYQ 698 Query: 795 QPGE 798 Q Sbjct: 699 QKPA 702 >UniRef50_UPI00016B20E8 ATP-dependent DNA helicase PcrA n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20E8 Length = 702 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 52/456 (11%), Positives = 119/456 (26%), Gaps = 88/456 (19%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE---LENRAVAGVNIE 356 + + G D+ +L+ F + ++ + + A + Sbjct: 251 QSIYSWRGADFRNILN----------FEKDFSGAQIIKLEQNYRNTGAILEAAQNVIIKN 300 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + + + E + + + +E D ++ Sbjct: 301 NQRTDKKIWTAGNQGDPVEVYSALDDKSEAAWIANVISNKVESGE-YNFDDFAILYRTNS 359 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 A R +P I V++ ++ + L + + +V Sbjct: 360 Q-----SYTIEQALNQRSIPLNIVGGTRFFDRAVIKDIMAYVRLCYQPNDMSSFMRIANV 414 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + L W ++ Sbjct: 415 P----SRGVGPTSLAKFISWQGQT------------------------------------ 434 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--M 594 ++ E++ + A L L +L I R + + L D Sbjct: 435 ---EMDIISALKQSGEATTITARARNALQELGCKLQIIRSEILNNTAPSDILEKVIDKTG 491 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 + L + ++ P + + L + + Sbjct: 492 YRDYILDGSPQAEDNNEYLNTLI-----------DESRPYADIETYLEEVSLMSSSDLQS 540 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 G V + TL + + F VV + GM +G+ P G+ +++R Sbjct: 541 EKGYVTLMTLHAAKGLEFPVVFMSGMEEGILPHSRTLD-----------GNPDDLEEERR 589 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERF--PSVLV 748 L + A+++LY+S+ Q N ++ PS + Sbjct: 590 LCYVGMTRARERLYLSHSASRYQFNQRKYNDPSRFL 625 >UniRef50_Q1IVP8 ATP-dependent DNA helicase, Rep family n=2 Tax=Bacteria RepID=Q1IVP8_ACIBL Length = 849 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 69/590 (11%), Positives = 167/590 (28%), Gaps = 84/590 (14%) Query: 257 LAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLS 315 + R + ++ + E L + VG+ + + G D +L Sbjct: 211 RERYNRRFQYVLIDEYQDTNRPQYEIMRALAGTLHNVCAVGDEDQSIYSWRGADIRNILE 270 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDS 372 F P+ + ++ + +N A + + + N + Sbjct: 271 ----------FEQDFPEAKIVRLEQNYRSTQNILEAASAVVKNNLKRKGKNLWTERMGGA 320 Query: 373 SITFHVCHSPQREVEVLHDRLLA--MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 + ++ + E + D + M+ D P+ V+ +F A Sbjct: 321 KVGYYEAPDGENESLFVADYINKYLMIAHDEDDEPKRAAVLYRTNSQ-----SRLFEEAM 375 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 + Y + + ++ IS L L + S +L ++ P I + + Sbjct: 376 RRYGIKYNVVGGFSFYERAEIKDMISYLKLIQNPSDSVALLRTINTP----TRGIGKTTV 431 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM------------- 537 + + E+ + ++ E L G ++ Sbjct: 432 EQIERIALETNLPLWDALGHIVEQRLMQPRACAALKGFRELIQDARAMLYGKFEERLVET 491 Query: 538 --------------ESAQGEWQSVLPYD------ESSGLIAELVGHLASLL-MQLNIWRR 576 E A + Q + +D ++ E +G ++ +R Sbjct: 492 AQVSKPEESDAAEPEIADEDLQDNMAFDFGELEPDAEEFSPEALGTAEEAAPEKVEGFRS 551 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 + + E L D +AE + + ++ + ++ Sbjct: 552 P-GENANVSEVLKFLIDRTGYIKQLEAEDTPESLARIENLRELVNAAMDSRDRG----ET 606 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + D L V + T+ + + F +V ++GM +G++P Sbjct: 607 IADFLDHAALVADTDDIEAGAQVTLMTMHAAKGLEFPLVFIVGMEEGLFPSSRT------ 660 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF----PSVLVQELI 752 + +++R L + A + L +S + ++ S + E+ Sbjct: 661 ------LMNPDEVEEERRLCYVGMTRAMRILVLSRARYRRRYGTDMPDASTASRFLSEVP 714 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 + + P + + R PQ + ++ SY Sbjct: 715 PQLFEDIGSPQKKTPVFGDDSYSTHYDYENEDQR----PQYGRTKQKTSY 760 >UniRef50_C6D4S8 ATP-dependent DNA helicase PcrA n=46 Tax=Firmicutes RepID=C6D4S8_PAESJ Length = 785 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 57/469 (12%), Positives = 130/469 (27%), Gaps = 77/469 (16%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDN---LLHNIQSDILELENRAVA 351 VG+ + + G D +L+ F D P+ +L + A A Sbjct: 251 VGDSDQSIYRWRGADITNILN----------FEDDYPEARTIMLEQNYRSSANILEAANA 300 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + + + IT + S E + + ++ D ++ Sbjct: 301 VIKLNTGRKPKKLWTDQGEGDMITLYQADSEHDEGYFVTGTISKNVKS--GRRYDDHAIL 358 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 V +PY I ++ ++ L L + + Sbjct: 359 YRTNAQ-----SRVIEEILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLISNPDDDISLQ 413 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +++VP + I + + L + G L + GL Sbjct: 414 RIINVP----KRGIGDTTVAKLAEEAVRQGT-----SIFSVLGNLQGIDLNARAQGL--- 461 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 + ++ L L+ E+ L + Sbjct: 462 -----------------------------LHEFRDMIDNLTQMVDYLSVTELTEKVLEMS 492 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 + + E+ A + I++ + + V +A ++ Sbjct: 493 QYRIELQREKTLESTARLENIDEFLSVTMDFEKRNEDKTLVAFLTDLALIADIDSMDKDD 552 Query: 652 QRFLAG--PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 A V + T+ + + F VV ++GM + ++P A + + ++ + Sbjct: 553 DGKPADNNSVVLMTMHSAKGLEFPVVFIIGMEESIFPHSRALNDNEELEEERRLA----- 607 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIG 756 + A+++LY++ PS +QE+ D + Sbjct: 608 -------YVGITRAEKQLYLTCARSRTLFGRISANLPSRFLQEVPDNVK 649 >UniRef50_Q1DAU6 ATP-dependent DNA helicase, UvrD/REP family n=6 Tax=Cystobacterineae RepID=Q1DAU6_MYXXD Length = 691 Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 48/496 (9%), Positives = 134/496 (27%), Gaps = 67/496 (13%) Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSI 374 +++ + + D + L + + + A A + ++ + + Sbjct: 258 AEVRNILDFDRLFPGGKEVRLEQNYRSVQTVLDAANAVIAKNPERKAKQMWTDRTGGTKV 317 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 C + + E + + + ++ DI V+ P ++ Sbjct: 318 KVVTCPNDEEEARFVAHEIQKHMAL--GISADDIAVLYRTNGQSRPI-----EETLREKN 370 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 + Y + ++ I+ + ++ +L +++VP I + + L Sbjct: 371 IGYEVVGGSEFFDRREVKDVIAYFKVIVNKLDEISLLRIVNVP----SRGIGDVTMERLN 426 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 G+ W + + Sbjct: 427 VHARGEGV---------------------------------------TLWTVMKKATDYE 447 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM-LNAFFLPDAETEAAMTLIE 613 L + + + +R + + ++ A + A Sbjct: 448 DLPPGAGARVMDFVDLVERYRAAYEHGQLANVTRKLLEEIGFREATRAHATSATAADKKL 507 Query: 614 QQWQAIIAEGLGAQYGD--AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + ++ + + L + L+ QE V + T+ + + Sbjct: 508 KGVDGVLNSLENFEKREGPKASLPTYLNRLSLDTRQEEEEVPGANRRVTLMTVHASKGLE 567 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 +++V +GM + + P +G+ +++R L + A++ LY++ Sbjct: 568 YRLVFFIGMEEDLMPHG------------GMQGEAQNLEEERRLCYVGITRAKEVLYLTR 615 Query: 732 IGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 ++ R PS +++L + + L E A+L + Sbjct: 616 AATRVKRGKEVPRTPSRFLEDLPPEVIEVVELDAPRQGPPTTEEKNFFANLKERFKKPAI 675 Query: 790 DPQNYQPGERQSYARE 805 A Sbjct: 676 PGTPPGGTGPSGGAAR 691 >UniRef50_Q98PM4 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma pulmonis RepID=Q98PM4_MYCPU Length = 734 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 63/554 (11%), Positives = 157/554 (28%), Gaps = 78/554 (14%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIY 312 K ++ ++ + F E L ++ VG+P + G D+ Sbjct: 201 SDLTRQKWASKYDYVLVDEFQDTSFIQYEIVKVLASNKNITIVGDPDQNIYSWRGSDFRI 260 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLD 371 +L+ F + N + + N +A I+ K Sbjct: 261 MLN----------FDKDFENTKTINFEQNYRSTPNILEIANKLIKNNKNRMEKNLFSTSA 310 Query: 372 SSIT--FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 F ++ + E + + ++++ + ++ I + Sbjct: 311 RGADPLFLTKYNNKLEAKWIVEKIIELSQQTK---YSQIAIFTRTAKYSRDL-----EEE 362 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY I +++ ++ L L + + +++ P R I + Sbjct: 363 LFQNSIPYVIYGGTRFFEREIVKDLLAYLRLI-NNSSEVSFIRVINTP----RRSIGPKT 417 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L + +E G + Y ++ Q + Sbjct: 418 LEKIITLASEKGY----------------------EKSFEFLENLYINKNLQSFFS---- 451 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + L + + R L ++ + L + ++ + Sbjct: 452 -----------LKDLEKFIQAILEARESLKNDQKIAYVLEKLVEKIDYKSFCIFDRNKRK 500 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 ++ + + + L D L + Q + V+I T + Sbjct: 501 DQVDFDIDQLYESIAFWEEENPELLLD--DYLNEISLLTSGDQNENSDQVSIMTAHSAKG 558 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V + G+ + +P L+ D + +++R L A+ A+++L++ Sbjct: 559 LEFDYVFITGLAEKHFPHFLSLKSNDYDDE---------IEEERRLCYVAVTRAKKQLFL 609 Query: 730 SYI----GRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 + ++ E S ++E+ Q++ D + Sbjct: 610 TAPLTLYWARDREKEELEISRFIEEMGLASSQNYEKRFSHKSLNDTDSYYQNSDYVSFDW 669 Query: 786 RMPFDPQNYQPGER 799 + F QNY + Sbjct: 670 KEKFVEQNYAKDNQ 683 >UniRef50_D1A297 ATP-dependent DNA helicase PcrA n=3 Tax=Actinomycetales RepID=D1A297_THECD Length = 768 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 71/550 (12%), Positives = 148/550 (26%), Gaps = 108/550 (19%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 +L + + + + + +E+ G+ VG+ + + G + Sbjct: 216 RRRFRHILVDEYQDTNHAQYELVRLLTESPGEDVGPAELCVVGDADQSIYAFRGATIRNI 275 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLDS 372 L F PD ++ + + + A IE + KR Sbjct: 276 LE----------FERDFPDATTILLEQNYRSTQTILSAANAVIERNAHRKPKRLWSDQGE 325 Query: 373 SITF--HVCHSPQREVEVLHDRLLAMLEEDPTL-TPRDIIVMVADIDSYSPFIQAVFGSA 429 +V + E + + + D L P D+ V VF Sbjct: 326 GEKIVGYVADNEHDEAAFVAAEVDRL--TDAGLARPGDVAVFYRTNAQ-----SRVFEEV 378 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 LPY + + ++ L + + + + +L+VP R I + Sbjct: 379 FIRVGLPYKVVGGVRFYERKEVRDLLAYLRVLANPADTVSLRRILNVP----RRGIGDRA 434 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + I W+++ Sbjct: 435 EACVEAHAARERI---------------------------------------TFWEALRT 455 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETEA 607 ++ G+ + + ++ R A P E V + L + Sbjct: 456 PEQVPGMAPRSAKAVREFVALMDDLRERAATATPAELIEAVLTETGYLAELQNSRDPQDE 515 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVP---------------LSLLRDELAQRLDQERIS- 651 ++ +A+ E L ++++ D + I Sbjct: 516 TRIENLRELEAVAREFEDRLAERVPAAEEEEEEAPSGAAGRLVDFLEQISLVADADAIPG 575 Query: 652 ----QRFLA--------GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 G V + TL + + F VV L GM DGV+P A Sbjct: 576 TKGAPIPPGERAPEDEQGVVTLMTLHTAKGLEFPVVFLTGMEDGVFPHLRA--------- 626 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQ 757 + +++R L + A+Q+LY++ + + S + E+ + + Sbjct: 627 ---MSNPQELEEERRLAYVGITRARQRLYLTRAVMRSAWGAPQVNPASRFLSEVPSSLVK 683 Query: 758 SHYLPGDEAL 767 A Sbjct: 684 WEREAAMPAP 693 >UniRef50_C7NAU4 UvrD/REP helicase n=5 Tax=Fusobacteriaceae RepID=C7NAU4_LEPBD Length = 735 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 57/473 (12%), Positives = 137/473 (28%), Gaps = 78/473 (16%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS---DNKRPLDPLDSSITFHVCHSP 382 F + ++ + + + + ++S I + + Sbjct: 268 FERDYKEAFTVKLERNYRSTKKILDTANELIKNNKSSKGKTLWTDGSDGEKIKIYNAMTV 327 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 E + + + ++ +D+ ++ V +PY I Sbjct: 328 YDEADFIVTEMKK--KKRDGADYKDMTILYRTNAQ-----SRVLEEKLLSANIPYKIYGG 380 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 ++ ++ LSL +++ + + +++VP + + E+ L +++ NE I Sbjct: 381 MQFFQRKEIKDILAYLSLLNNKNDNHNFYRIINVP----KRSVGEKTLEKIQEVANEKNI 436 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 +++ DE + A Sbjct: 437 ---------------------------------------SMLEALHYIDEI-PVRAATKL 456 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L + L +E ++E + E + IE+ +II Sbjct: 457 ALKEFYNLMQGIYSSL-EEMSIKEIFDEILIRTRYIDSIEDNKEDRVKNIEELLNSIIEL 515 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + L+ D + L V + T+ + + F V L GM D Sbjct: 516 EKQ---NPNMSLNEYLDMI--SLSSSTDEMEDDENYVKLMTIHSSKGLEFDYVFLAGMED 570 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE- 741 G++P + + ++ + A+ A+++L+ISY + Sbjct: 571 GLFPSISFDSPEEELEEERRL------------CYVAITRAKKELFISYSSSRKIWGKDD 618 Query: 742 --RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ 792 R PS + E+ + G + + + ++ + PF Sbjct: 619 NLRRPSRFIYEMK---QDNLEYVGGKYASLKGQSSAPRSFTPKIENFNPFSKD 668 >UniRef50_Q1J014 UvrD/REP helicase n=4 Tax=Deinococci RepID=Q1J014_DEIGD Length = 741 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 64/508 (12%), Positives = 146/508 (28%), Gaps = 74/508 (14%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIY 312 PA L ++ R R ++ + E L + D VG+P + + G D Sbjct: 211 PAVLERVQDRARFIHVDEYQDTNKAQYELTRLLASRDRNLLVVGDPDQSIYRFRGADIQN 270 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS 372 +L + + + +L + A + RP+ Sbjct: 271 ILDFQKDYLDAKVY-------MLEQNYRSSARVLTIANKLIENNAERLEKTLRPVKEDGH 323 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 + FH + E + + + L + + D+ V+ V + Sbjct: 324 PVLFHRATDQRAEGDFVAEWLTRLHA--EGMRFSDMAVLYRTNAQ-----SRVIEESLRR 376 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +P I ++ ++ L + + ++ + I + L Sbjct: 377 VQIPAKIVGGVGFYDRREIKDVLAYARLAINPDDDVALRRII----GRPKRGIGDTALER 432 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L +W +G + +EL Sbjct: 433 LMEWARVNGTSILTACAHAQELN------------------------------------- 455 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 A+ A L+ ++ + P ++ L+ E + + + Sbjct: 456 ILERGAQKAVEFAGLMHAMSEAADN-DEPGPFLRYVIETSGYLDLLRQEGQEGQVRLENL 514 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR--LDQERISQRFLAGPVNICTLMPMRSI 670 E+ A E G L+ + ++ ++ V + TL + + Sbjct: 515 EELVSA-AEEWSRENEGTIGDFLDDAALLSSVDDMRTKQENKDVPEDAVTLMTLHNAKGL 573 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 F VV ++G +G+ P + A + +++R LF + A ++L+++ Sbjct: 574 EFPVVFIVGTEEGLLPSKNA------------LLEPGGIEEERRLFYVGITRAMERLFLT 621 Query: 731 YIGRSIQDNSERFP--SVLVQELIDYIG 756 +Q S ++E+ Sbjct: 622 AAQNRMQYGKTLATEDSRFLEEIKGGFD 649 >UniRef50_UPI0001699EF8 Exodeoxyribonuclease V, RecC subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699EF8 Length = 196 Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 83/203 (40%), Positives = 120/203 (59%), Gaps = 7/203 (3%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M+ YHSNR++ L + + L P E I+VQ+ GMA+WL L+ + G+AAN+ Sbjct: 1 MILSYHSNRMERLLDHLLEQL-STPLGSPLGRETIVVQNPGMARWLSQQLALRSGVAANL 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +FPLPASF W+++ L E+P ES F+++S+ W +M LLP LLE+ F L+ YL DS Sbjct: 60 EFPLPASFTWNIYQAWLGEMPAESGFDRESLHWCIMGLLPGLLEQPAFAALQRYLEGDSG 119 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + + +QLS + ADLFDQYLVYRP + WE + G + + W+A LW+A+V T Sbjct: 120 ELRRYQLSGRIADLFDQYLVYRPQMVLAWENSAIETGT-QDEPWKAALWRAIVAQTQ--- 175 Query: 181 QPRWHRANLYQRFIETLESATTC 203 HRA L+ RF + Sbjct: 176 --AEHRAALFDRFQRMVARGDAP 196 >UniRef50_C7RGF8 ATP-dependent nuclease subunit B-like protein n=2 Tax=Anaerococcus RepID=C7RGF8_ANAPD Length = 1121 Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 84/788 (10%), Positives = 223/788 (28%), Gaps = 104/788 (13%) Query: 267 HSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAF 326 +R ++ D ++ + G + + L+ + F Sbjct: 177 SYIIERLPHCDFLADTVFYFDKFDSLSELKLSFVEGLINRGNEVFFSLNLDTEYINSNIF 236 Query: 327 VDV---TPDNLLHNIQSDILELEN--------RAVAGVNIEEFSRSDNKRPLDPLDSSIT 375 D+ + L+ ++I + ++ N ++I Sbjct: 237 SDLEFFDSTDKLYRKLNEITRTHDTVLDNTSLAKEDIGHLARNFERFNPLKFGGSPNNIR 296 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 F S + EVE ++ L ++ +D+ + ++ D Y I VF L Sbjct: 297 FLENPSTKTEVENTAR-IINYLVKEKGYRYKDLAIYISSEDEYKNEIIKVFNRYD----L 351 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 P + R + +++ F+++L L F S+D+ L + + + E+ + L Sbjct: 352 PIFMDSDRKLIDNHIVKTFLAILRLVIYNFNSQDLSYFLRSGLFSFSVNFEEKTI-ILEN 410 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM----LLGYAMESAQGEWQSVLPYD 551 ++ I+ + ++ + ++ R Y + +L Sbjct: 411 YIKNRKIKGKMFLEDKYFVYDEDFYKNLCENDPKREEKLGAKTYEYQVINELRDRILDLL 470 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + E L + + R + + + ++ + Sbjct: 471 NPLLELKE--EKTRDLCIGIFNIIDDKDIRRGIASFQKILKE------SGRLDEYKENDQ 522 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSI 670 + ++ I+ E + + L + + + + + I + R Sbjct: 523 VWDKFVEILEEIVDLMGERSSSLRKVYSLIEATCKDINVGIIPPSKDHIEITSFARARIA 582 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGF---------DLMSQKPKRGDRSRRDDDRYLFLEALI 721 V +LG+ND +P + K D + ++ +F + + Sbjct: 583 DRGVNFILGLNDVFFPSTNREDLIVGKGEKDKLRALDLDLKVFDEDFEEREKLVFYKLIT 642 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP-----------GDEALNCD 770 KL++SY + + + S+++ +++ E + Sbjct: 643 I-SDKLFLSYSLAN-RKSEAINKSIILNSIMNIFSDREGKTYGMVYGNDLGLSIEKFSYK 700 Query: 771 ESEARVKAHLTCLHTRMPFDP------QNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 E R + + D + + +++ + E + + L Sbjct: 701 TMEVRALRSIRQMMRNENVDENDREIARAFIKYLKENDSYELIEKGLNFTNDKKNLREDL 760 Query: 825 PFTLPE--TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 +L + + ++ + P + F L+ E + ++ + I Sbjct: 761 AGSLYKKNHFNVSEIESYSRCPYKYFVNYGLR---------PNIDESYEVDHMEVGNIVH 811 Query: 883 QLLNALVEQDDAERLFR-RFRAAGDLPYGAFGEIFWETQ--------------------- 920 +L + + + + D+ F E Sbjct: 812 KLFEDISRNLSEKNIEELKASDLEDILIENFKEATLRNLDKTRRENPRNKFILNNVLNSA 871 Query: 921 CQEMQQLADRVIACRQPGQSMEIDLA------------CNGVQITGWLPQVQPDGLLRWR 968 + ++L D+V + ++E D + + G + ++ G R Sbjct: 872 KRNSEKLIDQVKSGDFKIYAVEKDFGYENEDNLPKVYVDDKNYLRGRIDRIDKAGNF-VR 930 Query: 969 PSLLSVAQ 976 Sbjct: 931 IIDYKTGN 938 >UniRef50_C9LR66 ATP-dependent DNA helicase PcrA n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR66_9FIRM Length = 746 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 47/458 (10%), Positives = 132/458 (28%), Gaps = 71/458 (15%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLDSSITF 376 + + F + P + ++ + + A I+ KR + + Sbjct: 267 ADLRNIMDFREDYPSAQIIKLEQNYRSTQTILNAANAVIKNNVERLEKRLWTENNPGVHL 326 Query: 377 --HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + E + + + ++ E+ + + V+ V + R Sbjct: 327 QKYAASDEHNEADFIVESMMKEHGENH-VPYGKMAVLYRMNAQ-----SRVIEESMVKRG 380 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 + Y + + ++ L L + ++ +++VP R I + ++ L Sbjct: 381 IAYTMVGGTRFYDRAEIRDMLAYLKLVANFRDDISLMRIINVP----RRGIGQTTMQKLS 436 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 ++ + + ++ ++ +E S Sbjct: 437 EFSKQGNM---------------------------------------SMFEGIMSLEE-S 456 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 + L + + + E + + + ++ E+ Sbjct: 457 DIPVPARTKLQKFSALIFSFLNA-STEGDVFTLIQKIMTDTEYLSVLQQSSDPQAQSREE 515 Query: 615 QWQAIIAEGLGAQYGDAVP-LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 ++ L +++ L + S V + T+ + + F Sbjct: 516 NLGELLNVAKDFTQEQPEGGLPEFLEKV--ALVNDVDSFEEQDDKVTLMTIHSAKGLEFP 573 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 +V + GM++G++P + D + +++R L A+ A++KLY++ Sbjct: 574 IVYMAGMDEGIFPGVRS------------LMDETALEEERRLCYVAITRAKEKLYLTTSA 621 Query: 734 RSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNC 769 S ++E+ + EA Sbjct: 622 VRTMYGQVKPYVESRFLKEIPVDLLDEIRGNSSEAKRR 659 >UniRef50_C3RQ43 ATP-dependent DNA helicase n=4 Tax=Bacteria RepID=C3RQ43_9MOLU Length = 714 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 58/499 (11%), Positives = 155/499 (31%), Gaps = 75/499 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 P L K + + ++ + + + VG+P + G + Y+ Sbjct: 203 PDVLEKWQHKFQYIHVDEFQDVGNIEYRLVKLMSQDAITCVVGDPDQTIYSFRGANVNYI 262 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS 373 L + D +L + N + + + + S Sbjct: 263 L-------DFDKDFKPCKTVILDQNYRSTGNILNISNSLIRKNRNRLEKDLYTEATGGSE 315 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + ++ S Q E + + ++ ++ E + RD ++ + ++ + Sbjct: 316 VIHYMGKSEQEEADYICSQIEKIISEVDGVNYRDFAILYR-----ANYLSRTIEQSMISH 370 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 + Y I S ++ +S L L + +++VP I ++ L + Sbjct: 371 GIDYRIFGGLKFFSRKEVKDALSYLQLVCND-EDLAFERIINVPA----RGIGKKTLENI 425 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + A+ + ++++ + + Sbjct: 426 Q---------------------------------------LVALNNQVSLYEALTLFSDQ 446 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 L ++ + +L+ + ++ PL E +++N D + Sbjct: 447 IKLSSKAKKEIITLVKAVETAKQS---SLPLHEM---FENLMNDVGYIDMLKKDLEDNRI 500 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + Q ++ + + L + V++ ++ + + F Sbjct: 501 DNIHELQRSIYEFQ-NQNPDIATIENYLQEISLYTDNDNLDDGQYVSLMSIHMAKGLEFD 559 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI- 732 V +LG+++G++P A D +++R L A A+++L+++ Sbjct: 560 YVFVLGLSEGIFPSFRALSESD-----------EGLEEERRLAYVAFTRARKQLFLTDSE 608 Query: 733 GRSIQDNSERFPSVLVQEL 751 G S +S + S + E+ Sbjct: 609 GFSFVTDSPKISSRFIDEI 627 >UniRef50_C8WTI7 ATP-dependent DNA helicase PcrA n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTI7_ALIAD Length = 756 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 67/481 (13%), Positives = 134/481 (27%), Gaps = 82/481 (17%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL---ELENRAVA 351 VG+ + +G G D +L F PD + ++ + + A Sbjct: 251 VGDSDQSIYGWRGADIRNILE----------FQRDYPDARVIRLEQNYRSTGRILRIANQ 300 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + + N V + E + + D + M+ RD+ ++ Sbjct: 301 VIQHNQMRLEKNLWTDRGEGEKAKLFVAPDERVEADWVADEIARMVAN--GREYRDVAIL 358 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 V A R +PY I ++ I+ L L + L Sbjct: 359 YRTNAQ-----SRVLEEAFLQRGIPYRIYGGLRFYERREVKDVIAYLRLIANPNDDVSFL 413 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +++VP + I + L L ++ G + Sbjct: 414 RVVNVP----KRGIGDTTLEKLAEYARHRGTSLFEAALH--------------------- 448 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 S A + L+ L + R L +E L Sbjct: 449 ----------------ALEAGISKKAASALQSFVELIQTLQLQRAFLPLTDLTDELLDR- 491 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ-YGDAVP-LSLLRDELAQRLDQER 649 A + ++ ++ E + L +A D + Sbjct: 492 SGYREALRAERSLEAENRLENLDEFLSLTREFDEDGVPDGEMGALEQFLTHVALVSDADL 551 Query: 650 ISQRFLA----GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 R V++ TL + + F VV L+G+ +GV+P + A G + + ++ + Sbjct: 552 PGGRPGRREDLDEVSMMTLHAAKGLEFPVVFLVGLEEGVFPHRRALDGGEELEEERRL-- 609 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPG 763 + A ++LY++ + R PS + E+ + Sbjct: 610 ----------CYVGITRAMERLYLTTCRSRMLFGERRSFTPSRFLSEMPASDIERAGEED 659 Query: 764 D 764 Sbjct: 660 A 660 >UniRef50_A7NGD4 UvrD/REP helicase n=11 Tax=Chloroflexi RepID=A7NGD4_ROSCS Length = 759 Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats. Identities = 69/547 (12%), Positives = 140/547 (25%), Gaps = 60/547 (10%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 Y + + + A + N D + A G R+ + Sbjct: 211 ERYQERYGFLLADEYQDTNRAQYVLLKQLASRHHNIFVVGDEDQSVYAFRGADIRNILSF 270 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS 373 D +Q + + IL++ + + R + Sbjct: 271 ERDYPEAQVILLEQNYRST-------QAILDVAQAVINRSAQRRRDKRLWTR--NGEGVL 321 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + + E +++ + ++ P DI +M A R Sbjct: 322 VQVIEGYDQDEEAQLVAGEIARLIA-GGAYQPGDIAIMYRTNAQ-----SRAIEEALIAR 375 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 PY I ++ ++ L L + F + +L+ P I + L Sbjct: 376 QAPYIIVGGTRFYERKEIKDALAYLRLALNPFDDISLSRVLNWPA----RGIGQRTQEDL 431 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + + + + + A Q T Sbjct: 432 ERRAGAAAVPLYVMLHTLAANAEAAADQTTSPAPART----------------------- 468 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 + + L L ++ + + L + Sbjct: 469 GEMPSRARNALLGFLTLIDESLDRRQTLSLGALMDWLFERVGFREALRREYGDEEGDDRW 528 Query: 614 QQWQAIIAEGLGAQYGDAVP-LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 + LS +E+A D + + + V TL + + F Sbjct: 529 NNVMELRNVAEQYADLPLASQLSTFLEEVALVSDIDTLQEE--RNAVTCITLHQAKGLEF 586 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 VV L+G+ +G+ P + DR D++R LF A+++LY+ + Sbjct: 587 PVVFLVGLEEGLLPHARSAD------------DRDALDEERRLFYVGATRAKERLYLLHA 634 Query: 733 GRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 R PS + ++ + Q G A A + P Sbjct: 635 FRRATYGRTEIATPSRFLHDIPPDLLQRAPKRGYAAAQMVTGRAAALRNPRRNQAA-PVS 693 Query: 791 PQNYQPG 797 P + P Sbjct: 694 PHSAAPD 700 >UniRef50_A6CC22 ATP-dependent DNA helicase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CC22_9PLAN Length = 755 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 77/547 (14%), Positives = 160/547 (29%), Gaps = 78/547 (14%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 P A L R + ++ + + L + G+P + +G G Sbjct: 202 SPELRATLDERYQYILVDEYQDTNLAQYQIIMGLSLNTRNLCVTGDPDQSIYGWRGAKIE 261 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPL 370 +L F PD ++ + + VA I R K Sbjct: 262 NILQ----------FERDFPDCKTIRLEQNFRSTKEILRVADDLISHNQRRKVKSLFTEN 311 Query: 371 DSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + + + E + + R+ +++ D + + Sbjct: 312 EEGSPVELLCFQDERHEADDIARRIRNAVDQGKQ-EYTDYAIFYRVNS-----LSRELEL 365 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A A +PY ++ A ++ +S L L ++ +++ P+ I + Sbjct: 366 ALARHKIPYQLAGSVAFYERTEVKDLLSYLKLVNNPDDRVAFSRIVNKPL----RGIGKT 421 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L +W +E GI + + T +M+ G++M Sbjct: 422 TQNKLIRWADERGISLLEAAHQAADCPKLSKRAATMVARFAKMINGFSMAD--------- 472 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 SG +A L+ ++ ++ W+ PD + Sbjct: 473 -----SGSVAHLMENIIDSTRMVDSWKE-----------------------SPDEADQQR 504 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + + + YG+ L + L AG V + TL + Sbjct: 505 IANVNELLSTAKKY--DDIYGEETTLEGFLEV--STLASATDQLDTDAGRVTLMTLHAAK 560 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + + VV ++G+ + P + + R +++R LF + A+Q LY Sbjct: 561 GLEYPVVFIVGVEQNLIPHERV----------LREEFRDGLEEERRLFFVGITRAEQNLY 610 Query: 729 ISYIGRSIQDNSE--RFPSVLVQELIDYI-GQSHYLPGDEALNCDESEARVKAHLTCLHT 785 ++ S ++E+ QS + + DE VK Sbjct: 611 LTQTRERSMRGRPWRTITSDFLKEIDVEFNDQSTDELFESRSHFDEFVESVKRGEIDTAA 670 Query: 786 RMPFDPQ 792 +P+ Sbjct: 671 LKAANPE 677 >UniRef50_Q11GU4 ATP-dependent DNA helicase, Rep family n=53 Tax=Alphaproteobacteria RepID=Q11GU4_MESSB Length = 876 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 89/670 (13%), Positives = 182/670 (27%), Gaps = 112/670 (16%) Query: 190 YQRFIETLESATTCPPGL-PSRVFICGISALPPVYLQALQALGKHIEIHLLF-TNPCRYY 247 YQ+ ++TL + L P R+F P L+ A K+I + TN +Y Sbjct: 215 YQQRLKTLNATDFGDLLLHPIRIF-----REHPDVLREYHAKFKYILVDEYQDTNTAQYM 269 Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD------------- 294 W + + +A + Q Sbjct: 270 WLRLLAQRPGSPGTGGLPAEGRARGHALGDVSQAHAAGGPGASPGQRPGGASANKVNICC 329 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGV 353 VG+ + +G G + +L F P + ++ + + A Sbjct: 330 VGDDDQSIYGWRGAEVDNILR----------FEKDFPGATVIRLERNYRSTAHILGAASH 379 Query: 354 NIEEFSRSDNKRPLDPLDSS----ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 I K + H + E L + + A+ + D+ Sbjct: 380 LIAHNEGRLGKTLFTEHSDPDAPRVKVHAAWDSEEEARALGEEIEAL--QAKGHALNDMA 437 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 ++V + F F L Y + + ++ + Sbjct: 438 ILVR-----ASFQMREFEDRFVTLGLSYRVIGGPRFYERQEIRDALAYFRVVAQGADDLA 492 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 +++VP + + E +R + G+ Sbjct: 493 FERIVNVP----KRGLGESAVRQIHDVARMRGV--------------------------- 521 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 Q+ + L + L +L+ W+ L + R + Sbjct: 522 ------------PLLQAARDLVGTEELKPKPRASLRNLVESFERWQGLLDRTR----HIE 565 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 + +L D + + + + L + +A +D ER Sbjct: 566 LAETILEESGYTDMWKNDRSAEAPGRLENLKELIRSM--EEYESLRAFLEHVALVMDAER 623 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 + V++ TL + + F V L G +G++P Q + G RS Sbjct: 624 DEEL---DAVSLMTLHSAKGLEFDTVFLPGWEEGLFPHQRSLD----------EGGRSGL 670 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQ------SHYL 761 +++R L + A++ L+I + PS + EL + + S Sbjct: 671 EEERRLAYVGVTRAKKNLHIWFTSNRRIHGLWQSTIPSRFLDELPEKHVEVTDDGGSFGG 730 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFV 821 G + + F PG +++ A G V Sbjct: 731 YGRPIADRQPGRPNPYGSSRFDNMGEVFSNSYATPGWQRAQKNRTEATARNWGSRSGHQV 790 Query: 822 QPLPFTLPET 831 + + + P++ Sbjct: 791 ERIGYGEPDS 800 >UniRef50_B0MNA1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MNA1_9FIRM Length = 792 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 59/471 (12%), Positives = 138/471 (29%), Gaps = 70/471 (14%) Query: 321 QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP--LDSSITFHV 378 + + +F + ++ Q+ A I ++ +K I Sbjct: 319 ENILSFEEQFGAEVIKLEQNYRSTATILKAANAVIANNTQHKDKNLWSDLGDGDKIRMDR 378 Query: 379 CHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 + Q E + +R+L +++ D +++ + + A +PY Sbjct: 379 FSTEQEEAMFITERILDGVKQGK--KYADHVILYRNNAQSRTV-----ETTLAKSGIPYK 431 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 I ++ I+ L + ++ + +++ PV I L L + V+ Sbjct: 432 IIGGVRFYERKEIKDIIAYLCVLNNNYDEVRFGRIVNEPV----RGIGAATLDELNRVVS 487 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 GI + AM + A Sbjct: 488 GMGISYV-----------------------------QAMCESDSLPS--------LSRKA 510 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 +++ L +L+ ++ +++ L A E E + I + Sbjct: 511 KVLVPLGETFSELSQHTDDISDGSLIDDILDRF-GYREAMQRQGLEGEVRLENINELKSN 569 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 +I + LS +++A D + + T+ + + F V ++ Sbjct: 570 MITFAKENEGAG---LSEFLEQVALVSDMDSF--EADDDKAVLMTMHSAKGLEFDTVFVV 624 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 G + ++P + D +++R L A+ A++ LY + + + Sbjct: 625 GAEENIFPG------------YRSQFDPMEIEEERRLAYVAITRAKRHLYFTCAKQRMLY 672 Query: 739 NSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 S V E+ A S ++K + L + Sbjct: 673 GQTMRNKVSRFVVEIPSQYMAYDDHTAVTASAAARSAEQMKPRTSYLQQQQ 723 >UniRef50_B4CU41 UvrD/REP helicase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU41_9BACT Length = 678 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 56/463 (12%), Positives = 132/463 (28%), Gaps = 84/463 (18%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE-LENRAVAGVNIEEF 358 + +G G + +L F PD ++ ++ + A I+ Sbjct: 252 QSIYGWRGAEVSNILE----------FEAHFPDPVVVKLEQNYRSTNAILNTANFLIKNN 301 Query: 359 SRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 R K+ + ++E E + + + + + ++ Sbjct: 302 PRRRPKKLWSSAGDGDKVRIVGMSDDRQEAEFIANEIAQR-SVTESAPHEEFAILFRMNA 360 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + + +PY I ++ ++ ++ + + +L +++ Sbjct: 361 Q-----SRLLETNLRQLNIPYRIIGGKSFFDRREVKDLLAYANCLVNTDDDVSLLRIINT 415 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P I+ + ++ Sbjct: 416 PA----RGISSNTVEKATD---------------------------------------FS 432 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 + + + L V L + L+ + L L + V R+M+ Sbjct: 433 AKQKCSVFDVLTNEAFRGTLTKRTVESLDRFVEMLDRFETKLNTP--LSDHAAVLREMMK 490 Query: 597 AFFLPDA-----ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 D +T E ++ Q + L DE++ R ++E Sbjct: 491 ETGYLDELKRTCKTPQEALSRETNLMDLLKSFEDYQGRSSEGLRGFLDEMSLRQEREEDD 550 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 V + TL + + + V L+G+ +G+ P + D+ Sbjct: 551 DDARGTGVTLITLHAAKGLEYPHVYLIGLEEGLLPHDRSK-------------LEGTVDE 597 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELI 752 +R L + A++ L +S+ I+ S PS ++EL Sbjct: 598 ERRLLYVGITRARRTLALSWCRHRIRYGSPMPCTPSSFIKELP 640 >UniRef50_A6DKH4 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DKH4_9BACT Length = 674 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 65/453 (14%), Positives = 132/453 (29%), Gaps = 79/453 (17%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLDPLDSSI 374 + AF + P L ++ + N A ++I N + Sbjct: 261 AEVANILAFPQIFPGGKLIKLEQNYRSNNVILNAANKVISINSQRHVKNLWSAQEGGEKL 320 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 C S +RE + + D +L + T D ++ A Sbjct: 321 KVVACGSEEREAKAIADTILNKVNGRQN-TYGDCAILYRS-----NHQSRALEDAMRRGR 374 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +PY I + + ++ L + + L +LDVP I ++ LR Sbjct: 375 IPYKIIGDTSFYERKEVRDALAFLKIIHNPRDDFSFLRVLDVPP----RGIGPRTIKTLR 430 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + E+ +L + Sbjct: 431 EKAVENKTS----------------------------------------VYDLLRNPQFM 450 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV------CRDMLNAFFLPDAETEAA 608 L ++ +R+ ++ PL + + L + P + E Sbjct: 451 ENFGRSSDALMKFNNRVEEFRQKFQEKVPLAGLVEQYFEGVGYIEGLGRMYKPREDAEKR 510 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPVNICTLMP 666 + + I EG + +PL + + +++ R Q V + T+ Sbjct: 511 YQNVLEIIHTI--EGREKEDKRCIPLQEYLESV-SLMEEYRRRQEKDEDPNAVMLLTVHA 567 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F V + GM ++P + + ++R LF AL A+ Sbjct: 568 SKGLEFPSVFVTGMEKNLFPHEKSAG-------------LKALAEERRLFYVALTRAKSD 614 Query: 727 LYISYIGRS--IQDNSERFPSVLVQELIDYIGQ 757 L +++ + S+R PS + EL + Sbjct: 615 LILTWSKMRKAGRRMSQRMPSQFLGELPKDLVD 647 >UniRef50_Q7UIR9 ATP-dependent DNA helicase n=2 Tax=Planctomycetaceae RepID=Q7UIR9_RHOBA Length = 787 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 70/545 (12%), Positives = 154/545 (28%), Gaps = 93/545 (17%) Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 P Q L A + L + + ++ E Sbjct: 171 PVYQQQLLTANAVDFDDLLFHF-------ARLLRENPEVRSNLDEKLKYIMVDEYQDTNL 223 Query: 280 SENAGQLFNSDGE---QDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 ++ A S G+P + +G G D +L F P Sbjct: 224 AQYAIVRALSVDHPNLAVTGDPDQSVYGWRGADLNNILD----------FEKDYPAVKTV 273 Query: 337 NIQSDIL---ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL 393 ++ + E+ A + + N +P ++T +E + + D + Sbjct: 274 RLEQNYRSTPEILRVADQLIRHNRRRKQKNLFTDNPTGEAVTLRQYEDGYKEADGIADEI 333 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 + PRD +M + A +R +PY I + ++ Sbjct: 334 ANQMIAG-NAEPRDFAIMCR-----MNALTRSIEHALRNRGIPYQIVNGLEFYQRKEIKD 387 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 ++ L L ++ +++ P I + L ++++ ++ I Sbjct: 388 LLAYLHLINNPRHDVAFQRVINTP----TRGIGAKTLERIQRFADDHRI----------- 432 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 ++ DE L + S + + Sbjct: 433 ----------------------------PMLEAARRVDEIDTLSKRAKTLVTSFIRLYDR 464 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI-EQQWQAIIAEGLGAQ--YGD 630 + LE+ L + + + T I+ + + + Sbjct: 465 L--CIKATATLEDLLRFLIEEIKFVAYLERTTPEQQDNNPIANVDEFISAAVEFDQMHPE 522 Query: 631 AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 L +++ L + + V + TL + + F V ++ + D + P + + Sbjct: 523 DGSLEAFLEQV--ALVSDTDAFEDSNNRVTLMTLHAAKGLEFPRVFIIAVEDNLLPHRRS 580 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI--QDNSERFPSVLV 748 D ++ +++R L + A+Q L ISY +N PS+ + Sbjct: 581 KE------------DETQLEEERRLLFVGVTRAEQWLQISYAKLRSFRGENQPAIPSMFL 628 Query: 749 QELID 753 EL Sbjct: 629 GELPR 633 >UniRef50_C5CHH9 ATP-dependent nuclease subunit B-like protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CHH9_KOSOT Length = 1030 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 83/702 (11%), Positives = 203/702 (28%), Gaps = 71/702 (10%) Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 L ++ + + + D+ I S+ L + + +++ + Sbjct: 221 ELFAEARTIIDFVEEREGKIDSNGEIITSEKRFLSEQHLPKNLEPFLKTFFSEQKITQSC 280 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 ++ V EVE + + ++ P DI ++ +D Y + +F Sbjct: 281 ENVEVIVASDIFNEVEYISREIKRTIKS--GYEPGDIAIVASDFSRY----EKLFSERLD 334 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 + +P+ ++ + + F E ++A+ D ++ + Sbjct: 335 EYGIPFRSEGDEPLLESRAVKMLLLPFETAVNGFKPEKIVAMGDFGY-----GGSKLDTK 389 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL--TRMLLGYAMESAQGEWQSVLP 549 + ++ + + +++ + L ++ + + Q + Sbjct: 390 FFESIAIQARLIYDYPTLTLQKRVESWEERLERYKELVQRKIRAVEEISDEEFIEQEISG 449 Query: 550 YDESSGLIAELVG-HLASLLMQLNIWRRGLAQERPLE-----EWLPVCR--DMLNAFFLP 601 Y E + E + + + L +R ++ + EW + R + Sbjct: 450 YREVILRVDEEIEPAIERIFQVLAPFRSLSRRDCRIYREYFYEWSELIRIEERYRKLVEE 509 Query: 602 DAET-------EAAMTLIEQQWQAII---AEGLGAQYGDAVPLSLLRDELAQRLDQERI- 650 E E + +++ + ++ E L + + + L L Sbjct: 510 SEEEPFRKLEGERELLALKRFFNDVLPALEELLLFLGKERISPADYHRYLMLILRNTSFK 569 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL--GFDLMSQKPKRGDRSR 708 S R + V I +L+ R K+ +G NDG YP F +K + Sbjct: 570 SSRAIENRVEIQSLLNARFSRKKIKFFVGFNDGYYPMIRMNPLYSFTQYDEKAPKDLLLV 629 Query: 709 RDDDRYL-FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 ++ + L A+ +LY SY S D PS +Q++I G + G + Sbjct: 630 KEKQQKLNLYLAVTRTSDRLYFSYPE-STIDGEPLLPSAYLQDVIKSAGVTPERVGQKEG 688 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE-----WLPAASQAGKAHSEFV- 821 + + + + G +S + + + Sbjct: 689 RKVDIIPEL-ETVMSEKELKIAVANYFNTGHWKSLKDRFGMGDLEKVLQGFNREFTWIIS 747 Query: 822 --QPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 + + + + LQ + P + L++ E F L L Sbjct: 748 NRKKIEDHIGKVFSFSRLQSYHKCPFSFYLAYILKIQTPEE-------GLFELTPLEEGN 800 Query: 880 INQQLLNALVEQDDAE---RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD-----RV 931 + +L + + L R + +E + + + ++ Sbjct: 801 VYHNVLKDYFSKSALDWEKSLEENMRKYIRHDSELVFKFEYERLRRVIAEYIQIKESKKL 860 Query: 932 IACRQPGQSMEIDLACN-----------GVQITGWLPQVQPD 962 + +L I G + ++ D Sbjct: 861 PKVEGEFEPTYFELGFGMGNQKPVKVLEDAYIRGKIDRIDVD 902 >UniRef50_A8SMG4 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMG4_9FIRM Length = 750 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 55/499 (11%), Positives = 144/499 (28%), Gaps = 83/499 (16%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 VG+ + +G G + +L+ F + P++ + ++ + + Sbjct: 247 VGDIDQSIYGWRGANISNILN----------FENDFPNSKIILLEENYRSTQKILDCANE 296 Query: 355 IEEF---SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + + + N I + + E + + ++ DI V+ Sbjct: 297 LIKNNVNRKEKNLWTKKEGGDEIIYKSYQNENYEAIEVAQNVSNLIF--EGYNLSDIAVL 354 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 + F +A + Y + ++ ++ L L + Sbjct: 355 YR-----ANFQSFAIENALRKNSIAYRMVGGLKFYDRKEIKDILAYLKLIANPKDDNAFR 409 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +++ P + I L+ L ++ I Sbjct: 410 RIINYP----KRSIGNVSLQKLEEYCYSENI----------------------------- 436 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 + + + + +L + + + + +E + Sbjct: 437 ----------SLFDGLFRNEFLDSVSKKLRTEFENFRDMIFGFITCVEDTE-VEILIKEL 485 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ-RLDQERI 650 D + + + + E + G + + L L + Sbjct: 486 LDSIKFVDYLRENEKKEFEKKAENINLFLEEISNSYKGIKL-----LEYLETNSLLSDID 540 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 V + T+ + + +KVV ++GM++G++P + + D + Sbjct: 541 KTEDSDDTVTLTTIHSAKGLEYKVVFIIGMDEGIFPSERSIKERD-----------DGLE 589 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALN 768 ++R LF A+ A++KL+IS S V E+I+Y+ Sbjct: 590 EERRLFYVAITRAKEKLFISSTKSMTMYGKLNLYRVSSFVDEIINYVDDKSINLEFNFDE 649 Query: 769 CDESEARVKAHLTCLHTRM 787 + ++++ ++R Sbjct: 650 ERVTTSKIRNDAYTDYSRT 668 >UniRef50_C9RKG0 UvrD/REP helicase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKG0_FIBSS Length = 803 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 64/467 (13%), Positives = 140/467 (29%), Gaps = 52/467 (11%) Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 VG+P +G G D +L E D F T LL N + A Sbjct: 281 LFVVGDPDQTIYGWRGADINRIL-------EFDQFHKGTKTILLQNNYRSTPSILKVPDA 333 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED-----PTLTPR 406 + ++ RP+ + F+ + + E + + +R+ ++ + + Sbjct: 334 VIKNNKYRIEKVLRPVRAGGKTPVFYHAKNTREEAKWIVERIQNAVQNSVKNGAGGVHYK 393 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 DI V+ A +PY + ++ I L + Sbjct: 394 DIAVLYRMHSQSRSV-----EEALMSESIPYKVYSGVGFYQRKEIKDIICYLRMLVY-AD 447 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 + ++ P + + + L+ + + + G+ + + + Sbjct: 448 DLSFIRTVNTP----KRQFGPKKMAILQAFADTRKV--GLYEALLEIVYEAGRLNDVAPD 501 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 T+ L + + S + + + +R R E Sbjct: 502 VTTQAELSSVGNDHRKIDFDCKEFLSRSN--------VVEYVKLIEKYRSRYKDMRVSEL 553 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 + R+ L E + + + Q I+ Y + L + + Sbjct: 554 LSKMLRETKYEEMLRLDGDEDRLDNLAELKQGILEF--ENYYEEDASLDEYLQNIVLFTN 611 Query: 647 QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR 706 + SQ V + T+ + + F V + G+N+G +P + + Sbjct: 612 ADEDSQE--KDRVQLMTIHNAKGLEFPYVFVCGLNEGFFPVKRVQN-------------K 656 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQEL 751 + +++R L A A+ L +S R+PS + E+ Sbjct: 657 MQLEEERRLAYVAFTRAENVLCLSDAE-DGVAGESGSRYPSRFLLEM 702 >UniRef50_A4IYZ2 ATP-dependent DNA helicase/UvrD/REP helicase n=21 Tax=Francisella RepID=A4IYZ2_FRATW Length = 671 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 69/454 (15%), Positives = 147/454 (32%), Gaps = 74/454 (16%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILEL-------------ENRAVAGVNIEEFSRSDNK 364 + Q + A+ P+NL H +Q D +L VA IE S +K Sbjct: 242 DDDQSIYAWRGSRPENLRH-LQEDFADLKVIKLEQNYRSTGRILNVANKLIENNSHIFDK 300 Query: 365 RPLDPLD--SSITFHVCHSPQREVEVLHDRLL-AMLEEDPTLTPRDIIVMVADIDSYSPF 421 + D I + + E + + + ++ D V++ + Sbjct: 301 KLWSNKDYGEQIKVISLINDEDEAQFIASDIFFDRVKTKS--KNSDYAVLIRS-----NY 353 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 + +PY IS + S ++ IS L L + L +++ P Sbjct: 354 QAYLLERYMQMHKIPYTISGGSSFFSKAEIKDIISYLRLIVNPDDDRAFLRVINTP---- 409 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 + ++ + L ++ ++ + ++ EL + +L + Sbjct: 410 KREVGSATVHKLGEYASQHHCSFFHTLYSLENFELRDFTKRNLISFKDLILNTQQQINTS 469 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 Q EL + S + ++ R L Sbjct: 470 ISVQ-------------ELKNIINSFIDNIS------------------YRQWLIDSSSS 498 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 + + E I + + I+ + Y L+ + +++ +R ++ V I Sbjct: 499 EKQAEFRYANIIEVTKWIVNQLEDESYNGLESLATVLNKMLLIDILDRDNEDKNDNQVQI 558 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 T+ + + FK V ++GM +G+ P Q + +D+R L A+ Sbjct: 559 ITMHASKGLEFKKVYIMGMEEGILPHQQSIED-------------DSIEDERRLAYVAIT 605 Query: 722 SAQQKLYISYIGRSIQDNSER--FPSVLVQELID 753 A++ L I+ + ++ PS + EL + Sbjct: 606 RARENLTITMTKHRKKFGEKQVSVPSRFIDELPE 639 >UniRef50_Q2J6E3 UvrD/REP helicase n=4 Tax=Actinomycetales RepID=Q2J6E3_FRASC Length = 1130 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 126/798 (15%), Positives = 219/798 (27%), Gaps = 105/798 (13%) Query: 295 VGNPLLASWGKLGRDYIYL---LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 VG+P A +G G L + + A V ++ +L L N A Sbjct: 345 VGDPCQAIYGWRGASVANLDHFPTHFPGADGTPAAV--YELSVNQRSGGRLLRLANTVAA 402 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + RP + S EV + +L ++ D P DI V+ Sbjct: 403 QLRARHRVVELRPRPDVADQGEAVVALHVSWADEVAWIAGQLRRVV--DAGTAPGDIAVL 460 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 V I A+F +A LP + P + +++L + DS + ++ Sbjct: 461 VRARGD----IPALF-TAMQAAGLPVEVVGLTGLLIVPEVAEIVAMLEVLDSPTANAALV 515 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 LL P + + L L + E+ G + Sbjct: 516 RLLTGPRVR----LGPRDLAALGRHAREA------------ARVPDPVGDPDLPGRSDPL 559 Query: 532 LLGYAMESAQGEWQSVLPYDESSGL-IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 A D+ A + L ++ R + + L + L Sbjct: 560 AEAVADVDPADVVALSDVLDDPGPQMSAPGRARVRRLAAEIAALRGHVGEG--LLDLLHR 617 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIA-EGLGAQYGDAVPLSLLRDELAQRLDQER 649 + A A ++ A + L L + ER Sbjct: 618 VVATIGLDVELTATEVAVRARRQENVAAFLDVAAGFTDPDGTNSLPAFLGFLRAAREHER 677 Query: 650 ---ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL------GFDLMSQK 700 ++ A + + T+ + + ++VV + + V+P G + + Sbjct: 678 GLDVAGPSGADAIALMTMHRSKGLEWEVVAVPNLTSKVFPDLTVRDQWTTSPGVLPIPLR 737 Query: 701 PKRGD---------------------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 D + ++R L A+ A+ L+ S Sbjct: 738 GDADDLPAFTVCAEKAALDAFRADARQYAEREERRLAYVAVTRAKSLLFASGHWWGPTQK 797 Query: 740 SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY----- 794 + R SV + EL ++ L A E A +P++P+ Y Sbjct: 798 TPRGASVFLDELAEHARTGGGLVDVWAPEPAERTNPALATPERFAWPIPYEPEPYARRLA 857 Query: 795 -QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWA----------- 842 G A +P AS P T E V L L R Sbjct: 858 AAEGVMARLAALSVPGASAEPAGEPFVDGPAGMTAAERVLLAELDREARLLLAEERAARL 917 Query: 843 ------HPVRAFFQMRLQVNFRTEDSEIPDTEPF---ILEGLSRYQINQQLLNALVEQDD 893 P +++ E P + R + + + Sbjct: 918 ARTDVALPASLTASQIVRLRADPEAFARELVRPLPRRPVAAARRGTRFHAWVEEIFD--- 974 Query: 894 AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP-GQSMEIDLACNGVQI 952 +R DLP A E+ + Q R+P +L G + Sbjct: 975 ----YRALIDTEDLPGAADAELTDDDLRSLQQAFLRTAYGARRPFAIEAPFELRLAGRIV 1030 Query: 953 TGWLPQVQPDGLLRWRPSLLSVA----QGMQLWLEHLVYCASGGNGESR-----LFLRKD 1003 G + V G RW +QL + L + G S L++R Sbjct: 1031 RGRIDAVYDLGGGRWEVVDWKTGRSDADDLQLGIYRLAWARLRGVDPSAVDAAFLYVRTG 1090 Query: 1004 GEWRFPPLAAEQALHYLS 1021 R P L+ E+ L+ Sbjct: 1091 AVVRPPTLSEEELADLLA 1108 >UniRef50_UPI0001C37CA1 ATP-dependent nuclease subunit B n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37CA1 Length = 1112 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 96/683 (14%), Positives = 206/683 (30%), Gaps = 114/683 (16%) Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 P +I EVE + + ++ L R+I V+ DI + Sbjct: 283 LRNKKYSPEEAPKPDNIKIFEARDMYSEVEYVSASIKRLIHSRKDLRYRNIAVISNDITA 342 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR-FVSEDVLALLDV 476 Y+ I+A F +PY +S + V+ F SL+ L SR F SE + +L Sbjct: 343 YAGIIKAAFKRYD----IPYFLSVEKPVTHTAVMVYFTSLIDLLCSRKFRSELIFRMLKS 398 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 + D++ + L + +W +D + Sbjct: 399 GLT----DVSLTDISALENYC----YKWTVDSE--------------------------- 423 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--- 593 W+S + + E + +++ + R+ L+++ ++ + + Sbjct: 424 ------IWESEFTAPDDALDSLEAIRK--TVIEPVFALRKKLSKKCTAKKICTLIYEHLV 475 Query: 594 ----------MLNAFFLPDAE-TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 M++ D A + + I+ + + S + Sbjct: 476 SGGIEKNVGRMMSGLINSDRAYEAAEIKRLWGCLIDILDSICETLDENEMSFSEAAKLMK 535 Query: 643 QRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 + + S V + R K V ++G NDG +P Q+ G + Sbjct: 536 SMIGRINYSVPPQTLDAVMTASARTARLNAPKAVFIMGANDGDFPNQVTVHGLFSEPDRQ 595 Query: 702 KRGDRSRR---------DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 K ++ +R + +++ + +KL+ISY S ++P+ ++ +I Sbjct: 596 KLAEKDLLVSTPLADLIAAERLVVYKSVSAPSEKLFISYPL-SDLSGQTKYPAQIIDSII 654 Query: 753 DYIGQSHYLPGDEALNCDESEARV-KAHLTCLHTRMPFDPQNYQPGERQSYAREW----- 806 G ++ + A + A + R P + ++ Sbjct: 655 KMFGTDRIRLTEDDIPVHYYAATLHSAFYHYMQNRESNTPSAAAVEQLLMSRPDYKRRLI 714 Query: 807 ----LPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 Q SE ++ L P + L+ + + F L ++ R + Sbjct: 715 YVLSRSGHEQEYLIESEIMENLKSFSPLRLSSTGLEEYDLCHFKFFCDKCLGLHPREKIE 774 Query: 863 EIPD-TEPFILE---GLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE---- 914 E GL + Q+ ++ E E + + G FG+ Sbjct: 775 LDARIAGELTHECFFGLLSSRSKQEFISMSYEDMREEIGRKAEEYRNNKLAGDFGKDAKF 834 Query: 915 -IFWETQCQEMQQL----ADRVIACRQPGQSMEID----------------LACNGVQIT 953 + + + ++ ++A E+D L+ G I Sbjct: 835 GLIFSKLTDRLSEVFIHTQQSLMASDFVPHKFELDLRESHSVVLPFGNGKQLSFGG--IV 892 Query: 954 GWLPQVQPDGLLRWRPSLLSVAQ 976 + +G R ++ Sbjct: 893 DRADICKINGRDYVRIVDYKSSR 915 >UniRef50_C1TPS7 DNA/RNA helicase, superfamily I n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TPS7_9BACT Length = 656 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 60/478 (12%), Positives = 134/478 (28%), Gaps = 80/478 (16%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 VG+P + +G G D +L + + LL + + A + + Sbjct: 247 VGDPDQSIYGWRGADMSVILG-------FERHFPGSKVILLEQNYRSTETILDAANSVIG 299 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 I + E + D + +L D+ V+ Sbjct: 300 NNVNRPEKRLWTARSGGEPINVVTLGDERAEARYVSDVVEELLSL--GYRYTDMAVLYR- 356 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 + F R LPY + A ++ IS L L + + + + Sbjct: 357 ----MNALSRNFEQEFVKRGLPYRVVKGTAFYDRKEIKDAISYLRLAVNPRDASALARVA 412 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 +VP + +GL + +++ Sbjct: 413 NVPP----RGLGAKGLESVESYLSTH---------------------------------- 434 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 A+ W + D GL + + L + + L + D+ Sbjct: 435 --ASEARTTWCRIA--DGGCGLRGKGDKGIRDLARHMISLIDIGSD---LNRAVEYIMDV 487 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 + + + + + + L + E+ + + Sbjct: 488 IGYGSYLEKGYPDQFEERRENVMEL-----TSISPGSESLEDVLAEI-ALYTDQEVDDIP 541 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 +++ +L + + F VV ++GM DG++P + G R +++R Sbjct: 542 --DGISLSSLHAAKGLEFPVVFIVGMEDGIFPHGRSLDGG-----------RDELEEERR 588 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCD 770 L + A+++LY++ S S + E+ + G+ + Sbjct: 589 LCYVGMTRAEERLYLTSSRFRRLFGSVMNNDVSRFIWEIPENYRVVESRAGEGPNHVR 646 >UniRef50_B1XW04 UvrD/REP helicase n=41 Tax=Bacteria RepID=B1XW04_POLNS Length = 788 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 53/456 (11%), Positives = 125/456 (27%), Gaps = 90/456 (19%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS--IT 375 + + + ++ Q+ A I S K D + Sbjct: 275 ADVENMRLYEKQYHPLMVKLEQNYRSHGHILDTANHLIANNSERLGKNLRTDADHGEPVR 334 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 + S E L D + A++ + + ++ ++ + A + Sbjct: 335 IYEAPSDHAEAAWLVDEIKALV--NSGIKRTEVALLYRSNAQ-----SRIIEHALFSAGI 387 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY + ++ ++ L ++ +++ P I + L+ Sbjct: 388 PYRVYGGLRFFERAEIKHALAYSRLLENPNDDTSFSRVVNFP----TRGIGARSIEVLQD 443 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 L G Sbjct: 444 AARAQQCSL------------------------------------------YLAASTLEG 461 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 +G L+ + R +E + L +L + E + + +++ Sbjct: 462 KAGAALGGFVRLVDHMREATRHNTLPETVEFVIQ--HSGLIQHYLSEREGQDRVENLQEL 519 Query: 616 WQAIIAEGLGAQYGDAV-----------------PLSLLRDELAQRLDQERISQRFLAGP 658 A A YG PL+ L+ + Sbjct: 520 INAATAFIAEEGYGQDAAAAMLSGENAPGVAEVSPLAAFLSH--ASLEAGDNQAQAGQDA 577 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 V + T+ + + F V + G+ +G++P + + +++ +++R L Sbjct: 578 VQLMTVHSAKGLEFTSVFITGLEEGLFPHENSVN------------EQNGLEEERRLMYV 625 Query: 719 ALISAQQKLYISYIGRSIQDNSER--FPSVLVQELI 752 A+ A+++LY+S+ + R PS ++EL Sbjct: 626 AITRAKERLYLSHTQSRMLHGQVRYNMPSRFLEELP 661 >UniRef50_D1VUE5 ATP-dependent DNA helicase PcrA n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUE5_9FIRM Length = 720 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 63/499 (12%), Positives = 153/499 (30%), Gaps = 87/499 (17%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGV 353 VG+ + + G D +L+ F P + ++ + +N VA Sbjct: 243 VGDNDQSIYKWRGADISNILN----------FQKDFPGAKIIKLEQNYRSTQNILDVANS 292 Query: 354 NIEEFSRSDNKRPLDPLDSSITFH--VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 I+ + +K + E + +++L + + D+ ++ Sbjct: 293 VIKNNPQELSKSLWTKRQGGEKVYYKEFSVSNEEEFAVTNKILGL--NYKGYSFEDMAIL 350 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 F + + + Y I ++ ++ L + ++ +L Sbjct: 351 YRTNAQSRG-----FEESLSREGINYKIVGGLRFYDRAEVKDIMAYLKVINNPLDEIALL 405 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +++ P + I + + +R + + + Sbjct: 406 RIINKP----KRGIGDSSVEKIRDYAINNNLSMF-------------------------- 435 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 +++ Y++ + + + A+L+ L R+ L L E + Sbjct: 436 ----------EVIKNIENYEDLNVRAKKNIKSFANLINLLIE-RKDLLNVGELAELVVDE 484 Query: 592 RDMLNAFFLPDAETEAA-MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 + + ++ I++ I Y LS ++ D ++ Sbjct: 485 SQYVEDLKNQNTLEARTKISNIDELISNI------MSYDKETSLSDYLSNMSLLTDIDKT 538 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 S A VN+ T+ + + FK+V L+GM +G++P D+ + Sbjct: 539 SD---AKGVNLMTVHAAKGLEFKIVFLVGMEEGLFPIIRQDEDEDIEEE----------- 584 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALN 768 R L A+ A+ L+IS + S + E+ D I + ++ Sbjct: 585 --RRLCYVAITRAEDLLFISSSKTRYLYGKMTPKIKSRFINEMQDTI-EIVEEKNQRLID 641 Query: 769 CDESEARVKAHLTCLHTRM 787 + ++ +T Sbjct: 642 VIDYSGKIDERITTYKKVQ 660 >UniRef50_A5CU47 ATP-dependent DNA helicase n=4 Tax=Actinobacteria (class) RepID=A5CU47_CLAM3 Length = 816 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 76/524 (14%), Positives = 147/524 (28%), Gaps = 74/524 (14%) Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLES 319 L+ R + R S N + VG+ + + G D Sbjct: 263 LIRELTRAVAPEDVPVDTRMSTNGMGGIDGASLTVVGDSDQSIYAFRGADIRN------- 315 Query: 320 SQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDP--LDSSITF 376 + F P + + ++ + +N A I +K+ I Sbjct: 316 ---ITEFERDFPQSKVVLLEQNYRSTQNILTAANAVISNNFDRKDKKLWTSIGDGDKIVG 372 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 +S E + + D + + + +I V +P Sbjct: 373 FTGYSGHDEAQFVADEIQKLH--EEGTAYSEIAVFYRTNAQ-----TRALEEILIRSAVP 425 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 Y I ++ ++ L + + +L+ P + I L + Sbjct: 426 YRIMGGTKFYERAEIKDAMAYLVAVANPADVLALRRILNTP----KRGIGPATETALANF 481 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 G+ + EL L L+RML A+ Sbjct: 482 AESHGVTFREAMRRASELGL-GPKVTQAILALSRMLDEVAL--------------LLDPD 526 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 E + L+ L + R +A AE + + +++ Sbjct: 527 RPEGRTSVGDLVTTLLE----------KSGLVQALRASKDAQDEARAENVEELVAVTKEF 576 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 EG + V L DEL +G V++ TL + + + V Sbjct: 577 SRNNPEGQLVDFLTEVSLVAAADELDDS-----------SGTVSLMTLHTAKGLEYDSVF 625 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 L G+ + + P +++ + G ++R LF + A+++L+IS Sbjct: 626 LTGVEEDLLPHRMSAN---------EPGGP---AEERRLFYVGITRARRRLFISLAMTRA 673 Query: 737 QDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 Q PS +QE+ + PG + A Sbjct: 674 QFGEVNVAMPSRYLQEIPAELIDWKQSPGMATSRGGTQPRALNA 717 >UniRef50_Q5NVY5 ATP-dependent DNA helicase n=2 Tax=Archaea RepID=Q5NVY5_9ARCH Length = 1075 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 109/809 (13%), Positives = 218/809 (26%), Gaps = 137/809 (16%) Query: 263 RQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE 322 R R + D + + LL G+ + + +Q Sbjct: 246 RLTIDYARARGHEVLADKFDYVIVDEFQDTNRQQYELLKILAGDGKGITVV---GDVNQS 302 Query: 323 LDAFVDVTP---DNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS------ 373 + F P D + +L + +I + + D + Sbjct: 303 IYGFRGAYPENIDTFKEEYRPATFDLTENYRSTDSILRTAYRLIRNNYQKADDARLLQAF 362 Query: 374 -------ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 + + + + + + +L + P +I V+ S P Sbjct: 363 DHREGTRVMLLKTLNQNEQARRIVEEIDRLLA--EGVAPEEIAVLFRSYSSLRPI----- 415 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 +A R +PY +S P + ++ L + S + L +L R+ ++ Sbjct: 416 EAALKQRAIPYQVSTTTGFLKRPEIRTALAYLYVLASLEMPRHGADQLWYKLLQYRYGVS 475 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + L Q Sbjct: 476 IRDVHLLSAAAKR------------------------------------------DSIQG 493 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ--ERPLEEWLPVCRDMLNAFFLPDAE 604 VL GL E + L+ ++ R + L + + F ++ Sbjct: 494 VLTGSLPRGLSEEGRVKIRHLVDRIMELRASTNKELPDLLLDIYE-LSGLSREFTHDNSS 552 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 L + I+ D + L + D + ++ AG V + T Sbjct: 553 ESKTSLLNLKALHDIVTGFQDLYGTDLQGFIEYVELLDEIGDDGELPRQEKAGGVVLKTC 612 Query: 665 MPMRSIPFKVVCLLGMNDGVYP-RQLAPLGFDLMSQKPKRGD------------------ 705 + + + V ++ + +P + + D Sbjct: 613 HGAKGLEYSHVFVVDLAKDKFPLSRGGREPLVPDQLNDRYADVFSLPEAEIEEALKKRKQ 672 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ-------ELIDYIGQS 758 + ++R L A A+ +LY+ Y + SER PS+ + EL + Sbjct: 673 DFKLKEERRLAYVAFTRAKDRLYLCYPASYGE--SERPPSMFIAEACYNSGELHPDMELV 730 Query: 759 HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN-YQPGERQSYA-------REWLPAA 810 A+ +S+ K + D + Y P A Sbjct: 731 EDAEEKAAVATRDSDLDRKKNEIKRQILSTIDSEPDLALYNLLLYQHLCGRPIAINCPQA 790 Query: 811 SQAGKAHSEFVQPLPFTLPE---------TVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 + AG+ + L +P + L+ + P + Q L + RT+D Sbjct: 791 AMAGEEAAVIRAELDAGIPRGMQFDPKEVRLSYSGLKTYEECPKKYELQYLLNIPSRTKD 850 Query: 862 SEIPDTEPFILEGLSRYQINQQLLNALVEQDDA--ERLFRRFRAAGDLPYGAFGEIFWET 919 SE LS + L V+Q + E L LP F + + Sbjct: 851 SEGE-------SPLSFGNYIHKTLELAVKQQISTREELDAIAEKTSLLPD--FAGVDKDK 901 Query: 920 QCQEMQQLADRVIACRQPGQSME--IDLACNGVQITGWLPQVQP------DGLLRWRPSL 971 + R + +E + +G Q TG + +V ++ ++ Sbjct: 902 AKRIFDVFWARNKDTIRRSVGVEQFFNFTMDGFQFTGKIDRVDQLSENGDAEIIDYKTGR 961 Query: 972 --LSVAQGMQLWLEHLVYCASGGNGESRL 998 + + Q+ + L E RL Sbjct: 962 EPGTEDRERQITMYMLALQRDPALREKRL 990 >UniRef50_C2KR35 ATP-dependent DNA helicase n=3 Tax=Mobiluncus RepID=C2KR35_9ACTO Length = 900 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 54/458 (11%), Positives = 132/458 (28%), Gaps = 43/458 (9%) Query: 321 QELDAFVDVTPDNLLHNIQSDILE---LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFH 377 + ++ F P ++ + + + A A ++ N Sbjct: 327 RNIEEFEQDFPGATTVYLEQNYRSTGTILSVANAIISENSGRHKKNLWTEAGDGPKAIMF 386 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 + + E + + + V +PY Sbjct: 387 AADTERDEAAFIIREIRDAHTA--GTPWDEFAVFYRTNSQ-----SRALEEMLTRENVPY 439 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 + ++ I+ L+ + ++L +L+ P + + + +R+ Sbjct: 440 RVVGGTKFYDRKEIKDAIAYLTAAANPADDGNLLRILNEP----KRGLGDVAQTKIREAA 495 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 SG +G + GQ + + L +++ +G ++ P DE G Sbjct: 496 RLSGTSFGQAMRGFITGGV-HEGQLSAKATTALASLVNLLDNLRGLDEAGAPLDEILGTA 554 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW- 616 E G+L L + +E L + F L + ++ + ++ Sbjct: 555 LEDSGYLPKL-----RASNNPQDDARIENLLE-LHAVAEEFSLSEPDS--RLADFLERIS 606 Query: 617 -----QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + +G + +++ V + T+ + + Sbjct: 607 LVADTDQLPDQGSKEVAAKEMAPREPETNVSEASGDHPNPAPETKPEVTLMTVHTAKGLE 666 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F V + GM DG++P + D +++R L A+ A+++LY++ Sbjct: 667 FNTVFVTGMEDGLFPHSRS------------LDDPEAIEEERRLAYVAVTRARRQLYLTR 714 Query: 732 IGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEAL 767 S + ++ + D L Sbjct: 715 AAARTVFGDTMNMPASRFLNDIPAQYVDNRRELTDMDL 752 >UniRef50_C7MP63 DNA/RNA helicase, superfamily I n=6 Tax=Coriobacteriaceae RepID=C7MP63_CRYCD Length = 841 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 61/575 (10%), Positives = 145/575 (25%), Gaps = 91/575 (15%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEF 358 + + G D +L F P ++ + A I Sbjct: 250 QSIYSWRGADIRNILE----------FEQDYPQTRTVKLEKNYRSTATILDAANAVIAHN 299 Query: 359 SRSDNKRPLDPLD--SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 +KR + D I ++ + E + + + + I + Sbjct: 300 VNRKSKRLVPTGDTGDKIHVYMASDERDEGRWIAGEIERRHTQ--GTSYNQIALFYRTNA 357 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + +PY I + ++ L+L + +++V Sbjct: 358 Q-----SRMLEDMLLRAGVPYRIVGGTRFFDRAEIRDVMAYLTLVVNPADDMAAKRVINV 412 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P R I + + + + + E T T +L A Sbjct: 413 P----RRGIGKTTIELIDACAARNNCTFLEAAQLTIADESVRLSTRTALGQFTSLLSEAA 468 Query: 537 --MESAQGEWQSVLPYDES--------SGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 + + +L + V ++ L ++ + + Sbjct: 469 TWTGELRRIVEMILERSGMVRALENSGTDEDLGRVENIKEFLGVVDEFTATHDADEAHYA 528 Query: 587 WLPVCRDM-------------------------LNAFFLPDAETEAAMTLIEQQWQAIIA 621 + + + + + A Sbjct: 529 APIAAASLNEEAQDQEQDQQQERQQQEVQANVATASLATAEETSADTNANHSTAFLAAEE 588 Query: 622 EGLGAQYGDAV----------------PLSLLRDELAQRLDQERISQRFLAGPVNICTLM 665 A G + L+ + +A R D + +S V + T+ Sbjct: 589 FNTEAPAGTNMGTAADMAAPVRVLSGDSLADFIEWVALRTDLDTMSD--DGTAVTLMTVH 646 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + F V + GM + ++P + D + +++R L A+ A++ Sbjct: 647 AAKGLEFDCVFVAGMEETIFPHMNSIN------------DATGVEEERRLAYVAITRARK 694 Query: 726 KLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 +LYI+ + S + E+ + + L + + ++ Sbjct: 695 QLYITCASNRKLFGQTQANPTSRFLAEIPAELRHTSGLGSAGFSGTGWEKRGSRRGISGS 754 Query: 784 HTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHS 818 S +R+ P A+ K + Sbjct: 755 GAEAGHGRVFGTSSASGSSSRKRTPTAAAHRKEAA 789 >UniRef50_UPI0001C37867 ATP-dependent DNA helicase PcrA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37867 Length = 786 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 50/501 (9%), Positives = 141/501 (28%), Gaps = 74/501 (14%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLDPLDSSI 374 + + + F D + ++ + + N A + + ++ + Sbjct: 312 ANIENILGFEDQFAGAKVIRLEQNYRSTQTILNAANSVIGNNVGRKAKTLWTAGEQGDKV 371 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 ++ E + + + +E D V+ +++ S I Sbjct: 372 YWYKAVDETDEANFVAETIKKYHKETG--RYADNAVLYR-MNAQSNAI----ERMLMKCG 424 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +PY + ++ S L+ ++ +++ P + I + L + Sbjct: 425 IPYRVYGGMRFFDRKEIKDVTSYLAFINNHNDMLRFKRIINEP----KRGIGDSTLALIE 480 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + + E A + R Sbjct: 481 DISRDLKLSPFDVLKTCEEYAPLAKKVTSLRNA--------------------------- 513 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 + L L + L+E + + + + + +++ Sbjct: 514 ----------YEMFEDLTQKSEELPLDEFLDEVME--KTGYLDYLKTLENADTKIENVQE 561 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 +++ + L +E+A + +R V + T+ + + + Sbjct: 562 LRSSVVQYMNE---SEEPTLGGFLEEVALYTEADRDP--ETDDKVTLMTVHSAKGLEYDN 616 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 + ++G++DG++P + D M +++R L A+ A++ LY++ + Sbjct: 617 IFVVGLDDGIFPSSRSFDSEDDM------------EEERRLAYVAITRAKKHLYLTNASQ 664 Query: 735 SIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ 792 + + S ++E+ + + H E + + T + Sbjct: 665 RMLFGQTQRNVTSRFMREIGSELIEKHDNAAAMRSKLAEEDKSMTE--VHSATLQQQLAR 722 Query: 793 NYQPGERQSYAREWLPAASQA 813 N A + A Sbjct: 723 NKTKPAAPKEAVTYTAGERVA 743 >UniRef50_Q5PB91 DNA helicase II n=20 Tax=Rickettsiales RepID=Q5PB91_ANAMM Length = 671 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 59/439 (13%), Positives = 132/439 (30%), Gaps = 80/439 (18%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS---DNKRPLDPLDSSITFHVCHSP 382 F D P+ + ++ + N A I ++S + + Sbjct: 293 FADDFPEAKIVRLECNYRSTSNILCAASAIINNNKSRLGKKLWTTNHAGQKVGLMKFWDG 352 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + E + + + + + ++V + F VF +PY I Sbjct: 353 RMEAQFISEYIKG----SSEYRFDETAILVR-----AGFQTRVFEEYLVRCGIPYKIIGS 403 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 ++ ++ L + + +++ P + + + +R + ++ Sbjct: 404 TKFYDRQEIKDLVAYLRVVTNPKNDIAFERIVNKP----KRQLGASTVAKMRAYARDN-- 457 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 L L +G+ RFGL L Sbjct: 458 ----------RLSLLESGESMIRFGL---------------------------LPERTSN 480 Query: 563 HLASLLMQLNIWRRGLAQER--PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 L +LL + WR L + + + +N + + I + + A+ Sbjct: 481 TLQNLLDKFKCWRETLDTTSLTTVMQAIAEGSGYMNMLKDEGDAGASKIENIRELFAAVG 540 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 ++ + + L E S V + TL + + F +V L G Sbjct: 541 NFENATKFLEHISLVT-----------EVDSPEQANNHVYLMTLHAAKGLEFPLVFLPGW 589 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN- 739 +GV+P + + + +++R L + A+++L+IS + +N Sbjct: 590 EEGVFPHEKSIHD----------STGNALEEERRLAYVGMTRAREQLFISCVAVREVNNW 639 Query: 740 -SERFPSVLVQELIDYIGQ 757 S ++EL Q Sbjct: 640 RQPMKISRFIKELPAEHVQ 658 >UniRef50_C8WQE2 ATP-dependent nuclease subunit B-like protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQE2_ALIAD Length = 1169 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 129/1031 (12%), Positives = 280/1031 (27%), Gaps = 151/1031 (14%) Query: 7 SNRLDVL--------EALMEFIVERERLDDPFEPEMI-LVQST--GMAQWLQMTLSQKFG 55 SNR++ + + + R PF P + +V + A+ L M + Sbjct: 2 SNRVEWWIGAAGSGKSSRVAEEMRRAAEAQPFGPPVFWVVPESTAFAAETLLMDRVRA-- 59 Query: 56 IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYL 115 A ++ + P+ + +Q + L LR + Sbjct: 60 -AFRVEVVTMRRLADRVCAHGGMARPRLTQVGRQLLLRAAYDEL-----EPSLGPLRRAV 113 Query: 116 TDDSDKRKLFQLSSKAADLFDQYLVYR--PDWLAQWETGHLVEGLGEAQAWQAPLWKALV 173 + S L FD+ + P+ L E + Q + ++LV Sbjct: 114 RNPS-------LYHHLLSAFDELAAHGVSPEQLGALLEM-SAARSDEVEDKQRAVHRSLV 165 Query: 174 EYTHQ---------LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYL 224 A+ +++ + +A + +++ G A P Sbjct: 166 GKLGDVLKLYVRYRQLAEAAGFADPALLYLDAVHAAPHVSWLEDASLYLDGFHAFSPAER 225 Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG 284 Q + AL + + ++ W D + S L + Sbjct: 226 QFISALARRAKRLVIT-------WED--TGLEGERWEALLEEASSPAAWPHLSVWVDAHE 276 Query: 285 QLFNSDGEQDVGNPLLASWGKLGRDY-IYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL 343 + F+S+ + LL + RD+ L + A + L ++ + Sbjct: 277 EHFSSESQAVAAYHLL----ECARDFAQVSLDQAFCRMPIGATEGRFGASPLVYLERALA 332 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 + E+ + D + ++ + + Sbjct: 333 GHAPEQPI--------------------RGVRVSAFGDRAEELCAVADEIAHLV-QHERV 371 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 PRDI V V +D I R +P +I HPV + + + Sbjct: 372 RPRDIAVCVPTVDG----IGRDLADELEVRGVPVSIDSFATLADHPVGQLLRGAIGAVRT 427 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 F + + ALL P++ + ++ E G+ A + Sbjct: 428 GFDLDTIAALLRCPLVPVKRR------EAFDLYLREHGVSGFAAWLAPEPWAFAARAPRS 481 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + + + + + + E L L L +R A + Sbjct: 482 ASGLRDEEADEIRRQLGDALRPVIQAFAQPTLRLLEAARALWEL---LQAFRVKDALAQS 538 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 + + D A++ + + A+P + D + + Sbjct: 539 VVQVGD------------DPMAGVIHEQAWSGVTALLDDLATLEPEIALPAYEVADLVLE 586 Query: 644 RLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 + R+++ V +C + V ++ +D P ++ P G ++ Sbjct: 587 SMASLRLTRIPSDVDAVFVCDFARADNWSRPRVFVVAADDASLPPRVEPSGILRDDERLA 646 Query: 703 RGDRSRR------DDDRYLF----LEALISAQQKLYISYIGRSIQDNSERFPS-VLVQEL 751 + R +D+R + A + L ++Y P+ + E Sbjct: 647 FAEVFLRPLGRTSEDERRALECMPYRVMTRASEALVVTYAASEGGIERHLAPALASLVER 706 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA-- 809 + G ++ ++ + L+ +HT PF+ P + W A Sbjct: 707 GHLSIDAARGEGAVPVHPVQAMRLLADALSRVHTGAPFERVTQDPVVQDVLTYMWTGAGD 766 Query: 810 ------------ASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNF 857 + P V + L+ + R F Q L++ Sbjct: 767 VARFQRVLAGLCHRPRPWRLPAEWIRDLYGDPIRVSVSRLETYAKCSYRHFAQYALRLEP 826 Query: 858 RTEDSEIP------------------DTEPFILEGLSRYQINQQLLNALVEQDDAERLFR 899 E + L L ++ LL + + Sbjct: 827 LALQPEAERNAGTWIHAAVQLATQRLADDHRRLSELGHEELETALLEIAHQALEQAAQDT 886 Query: 900 RFRAAGDLPYGAFGEIFWET-----QCQEMQQLAD-RVIACRQPGQSMEIDL---ACNGV 950 + ++ + P A QLA ++ + ++D+ V Sbjct: 887 KLQSTLERPDVAVYVEERRRHFEFVVRAIWMQLARGQMRPLWLEKEFRDVDMGAWNGVRV 946 Query: 951 QITGWLPQVQP 961 + G + +V Sbjct: 947 VLDGRIDRVDR 957 >UniRef50_B2GEY3 ATP-dependent helicase/deoxyribonuclease subunit B n=4 Tax=Bacteria RepID=ADDB_LACF3 Length = 1245 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 134/1020 (13%), Positives = 275/1020 (26%), Gaps = 156/1020 (15%) Query: 15 ALMEFIVERERLDDPFEPEMILVQSTGMAQW-------LQMTLSQKFGIA-ANIDFPLPA 66 +M + + P + + LV + L+ L Q A AN+ + Sbjct: 17 QVMLDRLAAQYQQAPNDTYLYLVPNHVKFTTEVAVLKGLKKRLKQTGNYAQANVAVLSFS 76 Query: 67 SFIWDMFVRVLPEI-PKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF 125 W + P+ S + K++ L L + + Sbjct: 77 RLGWFLCKDDPDYQKPRLSNVGMAMVVAKIIRELKAESPD--------LLKMFRGESERQ 128 Query: 126 QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPR-- 183 +++ + L Q + +AL + Sbjct: 129 GFATEVTK----------QLVELQNANIQPADLAPDQE-TGIIKRALASQAGGGRASQST 177 Query: 184 --WHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 + + E+A T P R SA+ +L+A H+ Sbjct: 178 VFTDKMTVLYEIYRRFEAAVTTHVTAPDR------SAMLLNHLEA----ADLSTTHVYL- 226 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA 301 + + +++ + E N L Sbjct: 227 ------------DRFAGEFSAQEQLIVDALIQRAADTTVSLILDRDYRGRELPSQNNL-- 272 Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 + + + Y LL+ +D + + SD L V + + Sbjct: 273 -YYRSAKQYQDLLNLATQQVGVDVLDPIVLNQPNQRRVSDAL----VGVEEWMEADARFA 327 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 R P D + F + E+ + ++ ++ RD +V+ +D Y Sbjct: 328 LPDRLPAPTDQ-VGFFTAPTRVAELNRVATKIRQLVATGQ-YRYRDFLVVTRHLDGYQTM 385 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 ++ +F +P ++R + P+ +L + + DV+ LL +L Sbjct: 386 LEPIFSR----HQIPVFNDNQRPMATSPLATFTAALFKVLKDYYQEADVMELLKTGLLVP 441 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 T E L+ + G +W L G ES Sbjct: 442 E---TPEELQQEGRAKRNPNTFMTAVYRTENYCLKFGKGGRSWFDERPWRLEGEQPESDA 498 Query: 542 GEWQSVLPYDESSGLIAELVGHL---------ASLLMQLNIWRRGLAQERPLEEWLPVCR 592 + Q+ + + EL L L + + L W + Sbjct: 499 LKRQNAQINWVKNYIKDELAPALADLQTATTGRELATKFYQFLLDQGVRHQLYSWAHQAQ 558 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP-------LSLLRDELAQRL 645 + + I Q + ++ E + P ++ D + Sbjct: 559 E------SGQLTQLRDVQQIWQTFGTLLDEYVTILGDQVAPTEQPGQLVAEFADLMNAGF 612 Query: 646 DQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR- 703 + R +Q V + ++ KV+ ++G D V P A G + Sbjct: 613 NAGRYAQIPSTLDQVLVSESGMIQDNQRKVLFIMGATDDVMPEVKASEGLLSDPDRELLK 672 Query: 704 -----------GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 + +++ +L +++S ++LY+S S D+SE S ++ L Sbjct: 673 RGLNDDQFLPISGTDQINNEPFLNYLSMLSVTERLYMSAPLMS-SDDSELTLSPYLKGLA 731 Query: 753 DYIGQSHYLPGDEALNCDESEAR----------VKAHLTCLHTRMPFDPQNYQPGERQSY 802 + Q + + V A + + + + G + + Sbjct: 732 RHFNQWDDQNNAPTTDLPDRPNPRASEDDVWSFVAAPAVTMGNLIEVERLSKDTGRKLTS 791 Query: 803 AREWLPAAS--------------QAGKAHSEFVQPLPFTLPETV---------------P 833 A + A + G+ PL L + Sbjct: 792 AWRDVARALTRYDEGLTGRLNDIRDGQYAKNEAVPLQPELAARLYTTNRQGQVTNQLTAS 851 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD 893 + L++F+ +P F + L + R E D +N L V+ Sbjct: 852 ISQLEKFYQNPYDYFLRYGLHLKKRDELEVSSDK---------SGTLNHDALAFFVQSVI 902 Query: 894 AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQIT 953 E + + G E+ + Q M Q + + + + L IT Sbjct: 903 DEPDLQLADLVKEEHQGRQAELIDQAFEQAMNQ-QEELRELAANNSRVNLQLQVAKQLIT 961 >UniRef50_Q31JE9 ATP-dependent DNA helicase UvrD n=3 Tax=Gammaproteobacteria RepID=Q31JE9_THICR Length = 741 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 73/541 (13%), Positives = 160/541 (29%), Gaps = 70/541 (12%) Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS-ENAGQLFNSDGEQDVGNPLLASWG 304 W +K+P LA R R ++ + S VG+ + +G Sbjct: 198 ELW--LKNPQVLAHYQARFRHILVDEFQDTNSLQYAWLRVLAGASGRLFIVGDDDQSIYG 255 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE---LENRAVAGVNIEEFSRS 361 G + + F + D ++ + + A + + Sbjct: 256 WRGAKI----------ENIRRFDEDFSDVKTVRLEQNYRSTGTILKAANGLIAFNQDRMG 305 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 N I + + E + +++ + E+ + ++ V+ Sbjct: 306 KNLWSAGEEGDPIRIYEAFNELDEARYVCNQVESWCEQGGSR--SEVAVLYRSNAQ---- 359 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 V A +PY + ++ ++ L L + + + P Sbjct: 360 -SRVMEQALLQAQIPYRVYGGLRFYDRAEIKDVLAYLRLLVNTEDDAAFERVYNHPP--- 415 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 I + +R+ I + T+M A+ Sbjct: 416 -RGIGNKTADQIREVARMQEI--------------------SLWQAATQMAQDGLTARAK 454 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE----WLPVCRDMLNA 597 L ES + ++ ++ L E+ E L +++NA Sbjct: 455 TAVNGFLSLIESLKDSTAELTLQDQVIQVISRSGLQLHFEKDTSEQGQSRLENLDELINA 514 Query: 598 FFLPDA-ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 + + + + + A+ + + PL+ L+ Sbjct: 515 VSVFKPVQDNDTVEGVVPEEAAMTEAFDQPNFEN--PLAEFLA--QAALEAGEQQADQWE 570 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 V + TL + + F +V ++G+ +G++P Q + D R +++R L Sbjct: 571 SSVQLMTLHAAKGLEFPLVFMIGLEEGLFPSQQSQE------------DPYRLEEERRLA 618 Query: 717 LEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 + A+++L IS+ R SE PS ++E+ D Q L G + + Sbjct: 619 YVGITRAEKQLMISFANRRRMHGSEFYPLPSRFIKEIPDDCVQMVRLSGSVKHYGETASH 678 Query: 775 R 775 Sbjct: 679 A 679 >UniRef50_Q6MAS4 Probable ATP-dependent DNA helicase, mutU n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MAS4_PARUW Length = 668 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 65/468 (13%), Positives = 142/468 (30%), Gaps = 71/468 (15%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 + +G G D +L + E + + + N + + +++ ++ Sbjct: 252 QSIYGWRGADVKNIL-EFEKATVIKLEQNYRSTNFILKAANAVID----------HNQYR 300 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 I + E +V+ R++ M +E L +D ++ Sbjct: 301 HKKKLWSEKGEGHPIEVFHTPNELEEAQVVVKRIVKM-KESLNLQWKDFAILYRS----- 354 Query: 420 PFIQAVFGSAPADR----------YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 + F +A + +PY I ++ + L L + E Sbjct: 355 NALSRQFETALMRQVWKFQNRWIQGIPYEIFGGTEFYERKEVKDLCAYLRLIINPADQEA 414 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 +L +++ P R I E+ L L + ++ + G Sbjct: 415 LLRIVNQP----RRGIGEDSLDLLTTHNRQ---------FQRPLWDVLKEVANQKGEGAK 461 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 + G A + + + L +L L+ Q+N +++ + +E ++ Sbjct: 462 LIYHGKAFKGICEFTHLISE-AKKRFQEGNLAENLKWLIEQIN-YQKAIKEEVKSQQMRD 519 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 + + F AE E L ++ + + Sbjct: 520 FKWENIQEFVSSLAEFEQQAQLNPDLESSLENFLGNMYVDNKF--------------NQS 565 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 V++ T + + F V L+GM D + P K + Sbjct: 566 TKNNRHEDRVSLLTFHSAKGLEFPVCFLVGMEDHIIPH-------------EKSMKETGI 612 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYI 755 +++R L A+ AQQ L IS + + + PS + E+ + Sbjct: 613 EEERRLMYVAITRAQQHLTISMAQQRKRMGKDMASRPSRFLFEIPKEL 660 >UniRef50_Q21PD1 ATP-dependent DNA helicase Rep n=15 Tax=Gammaproteobacteria RepID=Q21PD1_SACD2 Length = 672 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 61/477 (12%), Positives = 128/477 (26%), Gaps = 77/477 (16%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDP--LDSSI 374 + + P + ++ + A V I +K + +I Sbjct: 254 ARPENMSLLKVDFPSLHVIKLEQNYRSTARILKAANVLIANNPHEFDKTLWSDLGMGETI 313 Query: 375 TFHVCHSPQREVEVLHDRLL-AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 C + E E + +L L +D V+ + Sbjct: 314 RVIKCPTEDAEAERVATEILTQRLRRQ--CKFKDFAVLYR-----GNHQARLMELKLQHH 366 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY IS + + ++ + L L + L +++ P R I L L Sbjct: 367 QIPYNISGGTSFFARAEIKDIMGYLRLIANPADDNAFLRVVNTP----RRQIGTGTLEAL 422 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 ++ E I + M L + Sbjct: 423 GRYSTERDI--------------------SLWAACDEMGLQALIPK-------------- 448 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD-----MLNAFFLPDAETEAA 608 + + + LN R P++ + D L+ E Sbjct: 449 -----QGLERIRKFSGWLNSVRSNCHNGDPVQAIREMIDDIDYEGWLHQNASSPKVAEKR 503 Query: 609 MTLIEQQWQAI---IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLM 665 + ++I + ++ +L + ER + V + TL Sbjct: 504 FENVNILVESIKNSLERDENEDADGEERINTAISKLLLQDMLERQEEEDETDRVQLMTLH 563 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + F V LLG+ + + P + + +++R L + AQ+ Sbjct: 564 ASKGLEFPHVFLLGLEEEILPHRNSIE-------------EDNIEEERRLAYVGITRAQR 610 Query: 726 KLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 L ++ G Q ++ PS + EL + ++ + L Sbjct: 611 TLTMTLAGTRKQFGEKQTTTPSRFLDELPPEDVEREGFSEATPEQIEKKGKETLSSL 667 >UniRef50_C9A8J1 Exonuclease RexB n=4 Tax=Enterococcus RepID=C9A8J1_ENTCA Length = 1205 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 116/797 (14%), Positives = 237/797 (29%), Gaps = 126/797 (15%) Query: 144 DWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIE-TLESATT 202 D LA + + + A +++ + + L RF+E +L + Sbjct: 142 DLLAGGTAPSATQDEEKKYSELAKIFQRFEQELLERALQVEQPITLLTRFLEGSLLDDSP 201 Query: 203 CPPGLPSRV-------------FICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWG 249 +P+ V I G SA Q +Q L K + + Sbjct: 202 VEQAMPNAVSMNKAPDLSHALFIISGFSAFSTQEQQLIQVLMKKSHVII----------- 250 Query: 250 DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD 309 +L + ++ + L S+ + + Sbjct: 251 ----DLFLDRGYPQELPSPLNLFYEAGRTYYQ------------------LISFARENQV 288 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 IYL L +QE+D ++Q E+E + + + + + Sbjct: 289 PIYLDQKLSVNQEVDKEAK-------GSMQQAYNEIETFWRQTQSQVNYQQQSSVKDF-- 339 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAML---EEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 + +P+ E+ + + M+ + P L R+I +++A+ + Y +I +F Sbjct: 340 ----LAVWKVGNPEEEIRQIAASIRGMMSDKKRYPALRYREIQLLIAEPEIYHQYIPKIF 395 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 + +P+ I + + HP++E + + F D+L LL + + Sbjct: 396 ----TEFEIPFYIDEEQMMAQHPLVEFLNAFFACQSYGFRLNDILRLLRTELYLPAAYRS 451 Query: 487 EEG-----------LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 E + + G + EL Q L Y Sbjct: 452 EADWLVGRDQFRKLVDITENKALAHDFQ-GASWTRNEDWELIEYLQSEEEQTDKVDLTAY 510 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 + + Q V D L A + L + E L W Sbjct: 511 TNQLRRAFKQDVA--DTLDWLTAARTNR--DAVELLYRFLLNAGVEEQLRHWRD------ 560 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 A + Q ++ E ++ +L D L L+ + Sbjct: 561 QAIQQGKLDQARNHEQAWQALMDLLDEYAAIYGEESFDFALFEDVLLTGLENVTFGKIPT 620 Query: 656 A-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 A VNI L R K+ G+N+ PR++ L++ + ++ + ++Y Sbjct: 621 AIDQVNINRLDLARPKQAKITFAPGLNETALPRKIENK--TLLTNEERQHFNQLFNGEKY 678 Query: 715 L--------------FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 L F L+SA + L +SY + S + ++ + Sbjct: 679 LRDTVVEGSVKEPFAFYSVLLSATEHLSLSYAV-NFDTQQNIKMSPYLDRVVKRLDVPLQ 737 Query: 761 LPGDEALNCDES---------EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 G L D ++ P+ ++ ++ EW A+ Sbjct: 738 ERGILTLVSDPRNYVGSYRGLIYQINNLSQQAQKNKENLPRVWEQLKQALLRSEWTDLAA 797 Query: 812 QAGKAHSEFVQPLPFTLPETV---------PLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 Q ++ + P+P + + + ++ F+ + F L++ R Sbjct: 798 QVFESQTHQNIPIPLSQAQAAALYGPSIYSSISQMETFYQCEYKYFVSYGLRLKEREVYG 857 Query: 863 EIPDT-EPFILEGLSRY 878 P F + L R+ Sbjct: 858 LNPAMTGEFFHDALDRF 874 >UniRef50_A9ETX5 ATP-depentend DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9ETX5_SORC5 Length = 820 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 65/455 (14%), Positives = 144/455 (31%), Gaps = 61/455 (13%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSD---ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSI 374 + + F P + ++ + I + A+ + + + I Sbjct: 274 ADVRIVRGFRRDFPHATVVKLEQNYRSIGHVVRGALGVIRHASDREPKELWTANQDGAPI 333 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 S E + + + ++ ++P +I V V + Sbjct: 334 DVVAADSEHDEAAWVVECVRELIA--EGVSPNEIAVFYRIHAQ-----SRVLEEVLREAR 386 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +PY I ++ +S L + + D+ +++VP I + + L Sbjct: 387 IPYQIIGGTRFFERAEVKNLLSYLRVIANPKSDVDLNRIINVPA----RKIGQSTVDKLI 442 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 Q + G+ + + +L G SA +P + Sbjct: 443 QAADLLGV--------------------SLFEAIDPLLEGRVPPSA-------MPGGQLP 475 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA---ETEAAMTL 611 L + L ++ P V A L E+EA + Sbjct: 476 PLASAAKRSLLGFRDLIHGLMTEAKSASPSALAEEVLARSGYAKALEQEDSVESEARLQN 535 Query: 612 IEQQWQAIIA-EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 + + Q+++ E GD L+ + ++ D + ++ V + T+ + + Sbjct: 536 LRELVQSLVDYEQEATAAGDEATLAGYLERVSLVSDVDALADVP---KVAMMTIHAAKGL 592 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 F V L GM + ++P + ++GD +++R L A+ A+++L+I+ Sbjct: 593 EFHAVFLTGMEEDLFPFRSQDPN--------RKGD---IEEERRLAYVAITRARERLWIT 641 Query: 731 YIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPG 763 + R R PS + +L + P Sbjct: 642 HAARRAIFGQTRYGLPSRFLADLPPASVRPIATPA 676 >UniRef50_B0P0N3 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0P0N3_9CLOT Length = 745 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 64/512 (12%), Positives = 159/512 (31%), Gaps = 86/512 (16%) Query: 257 LAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLS 315 K R ++ + + L VG+P + G D YLL+ Sbjct: 242 RLKWQKRLEYIMIDEFQDIDKIQYQLMKVLCGYHKNLFIVGDPDQTIYSWRGADINYLLN 301 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDS 372 F PD + + ++ + + P+ + Sbjct: 302 ----------FDKAFPDVKTIMMNENYRSTPQILSVCNSLIDKNKNRMKKDLLPMCHSKN 351 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 S+ ++ + + E + + D+++ + ++D ++ +DI ++ + ++ Sbjct: 352 SVLYYHGDTSEEESDWIADQIIKLHKKD--ISYKDITILYR-----AHYVTRTLEETLLK 404 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 + +PY+I ++ +S L + + L +++VP + +I ++ + + Sbjct: 405 KKIPYSIYSGIQFFERMEVKDALSYLRMITYK-DDLSFLRIVNVP----KRNIGKKRMEF 459 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L+ +VN ++ L + + Sbjct: 460 LQAYVNAHHC--------------------SFYEALKECVEDPIFKGTDA---------- 489 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 + ++ + Q E + L + + + Sbjct: 490 ------------KDFISLIDAFSVTYEQRTISEVLSDILDRSGYEEMLRTTGNQERLDNL 537 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 + QA+ G+ L D +A + + + V + T+ + + F Sbjct: 538 AELKQAVYDY--EISCGEEALLPDYLDHIALFTNSDVTDD---SDKVKLMTVHAAKGLEF 592 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 V L +N+G++P + +++R L A+ A + L++S Sbjct: 593 PHVFLCALNEGIFPSKKTST-------------IEGMEEERRLAFVAMSRAMKSLFLSES 639 Query: 733 GRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 D S R+PS + ++ + P D Sbjct: 640 HGKNFDGSTRYPSRFILDIDQKFLEYVKKPED 671 >UniRef50_UPI0000E87DAA UvrD/REP helicase n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87DAA Length = 725 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 49/433 (11%), Positives = 121/433 (27%), Gaps = 70/433 (16%) Query: 337 NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS-ITFHVCHSPQREVEVLHDRLLA 395 +++IL N + + + D I + + E + D + Sbjct: 289 RSKNNILNAANAIIENNADRLGKNLWS----EAGDGDLIRQYNALDDRFETSYILDEIKG 344 Query: 396 MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 + I ++ + V A +PY + +++ + Sbjct: 345 LHRSGS--RYDQIAILYRNNAQ-----SRVIEMAMVSNNIPYRVYGGLRFFERAEIKSSL 397 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 + L L ++ L +++ P I + L ++ N I Sbjct: 398 AYLRLITNKKDDTAFLRIINFPP----RGIGAKALELIQDVANAEKI------------- 440 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY-DESSGLIAELVGHLASLLMQLNIW 574 + R+ + D+ G + + + Sbjct: 441 -------SLWQSAERIESENKNTKISFFVHLIRHIEDQIEGNNIDES---IDFINSYSTL 490 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP- 633 + +++ + ++++A E T E Sbjct: 491 KDHYGKDKDGSSRIENLDELVSAAKAYINEFREENTENE-------------SGDSKASI 537 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 LS D L+ + + + T+ + + F V + G+ +G+ P Sbjct: 538 LSDFLDF--TSLESGELQASAGDDALQLMTIHSSKGLEFDTVFITGLEEGLCPH------ 589 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQEL 751 + + + +++R L A+ A+QKLY++ + PS + E+ Sbjct: 590 ------ERSLSENNGLEEERRLMYVAVTRARQKLYLTLAQSRLTYGQTMYNLPSRFLDEI 643 Query: 752 IDYIGQSHYLPGD 764 + + + P Sbjct: 644 PNELVKRINAPKK 656 >UniRef50_A5EWK9 DNA helicase II n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EWK9_DICNV Length = 712 Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 51/522 (9%), Positives = 134/522 (25%), Gaps = 74/522 (14%) Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASWGKLGRDYIYLLSD 316 + R + ++ + + QL VG+ + +G G Sbjct: 208 QRFHQRFQAILIDEFQDTNTLQFKLVTQLCAPETQLFVVGDDDQSIYGWRGA-------Q 260 Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITF 376 ++ L+ + L + A A + + +I Sbjct: 261 IDHIVHLERYYPTVHTIRLEQNYRSTKTILAAANAVIAHNQTRLGKTLWSDGKHGEAIAL 320 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 + + E L + + + ++ + ++ A + +P Sbjct: 321 YAAVNEYDEARYLVENIAQFHQ--HGGAYDQCAILYRS-----NALSRIYEEALIQKNIP 373 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 Y I ++ ++ L L + +++ P I + + +R Sbjct: 374 YRIYGGLRFFERAEIKDALAYLRLLHYPDDDAALERIINQPP----RGIGAKTMEDVRLL 429 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS-G 555 W+ + Sbjct: 430 AQRVQC---------------------------------------SLWRVITDDALLEQK 450 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 A L + + L + L + D + + + Sbjct: 451 CSARAQNALRQFRALIIKMTAFAERSDSLRDILKMVVDESGLYAALTNNNQEETENRREN 510 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 +IA G + + D L + + A V + TL + + F V Sbjct: 511 LHELIAAGDYQSDQNDADHDKIADFL-AMASLDAGDKETNAHGVQLMTLHSAKGLEFNRV 569 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 ++ + +G++P + + ++ +++R L + A+++L +S+ R Sbjct: 570 YMVALEEGLFPNARS------------LENSAQLEEERRLAYVGITRAREQLTMSFAERR 617 Query: 736 IQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 + PS + E+ + ++ + Sbjct: 618 RYYGQDNYARPSRFLNEIPPELLNMVRPVLFNRTQPNDIQED 659 >UniRef50_C5C915 ATP-dependent DNA helicase PcrA n=7 Tax=Actinomycetales RepID=C5C915_MICLC Length = 858 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 67/545 (12%), Positives = 145/545 (26%), Gaps = 91/545 (16%) Query: 234 IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD--- 290 + +H+ P D + L+ + + L Sbjct: 258 MTVHMFEAFPRVL---DNYRRRFRHVLVDEYQDTNHAQYRLIRLLAGPAGDPEGVETPGG 314 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RA 349 VG+ + + G D ++ F D + ++ + + Sbjct: 315 ELTVVGDSDQSIYAFRGADIRNIVE----------FEQDFTDAVTIKLEQNYRSTQTILD 364 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 A IE KR I + + E E + + L+++ + P D Sbjct: 365 AANAVIERNPDRRPKRLWTAEGEGPAIVGYAAENESAEAEWIAATI-DRLQDEDGIRPSD 423 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 + V R +PY + ++ ++ L + + Sbjct: 424 VAVFYRTNAQ-----SRALEERLVTRGIPYRVIGGTRFYDRKEIKDALAYLRVIVNPDDD 478 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 +V +L+ P + I + + W + + T+ Sbjct: 479 VNVRRILNEP----KRGIGDRAEGAVAAWAQRN--------------------RSTFSAA 514 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 L + + V ++ L LE Sbjct: 515 LR----------------DAEHAPGLAARSLKAVNGFVQMMDDLAQVAETAGPATVLEAV 558 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 L ML A + + + + A++ + +++A D Sbjct: 559 LEQ-SGMLAALRESEDLQDESRADNLGELVAVVRSFEKTTPDGTLS--DFLEQVALVADA 615 Query: 648 ERISQRFL---------AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 +++ G V + TL + + F VV L GM GV+P + Sbjct: 616 DQLPTAPDVEGEALAEAQGQVTLMTLHTAKGLEFPVVFLTGMEHGVFPHARS-------- 667 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIG 756 D ++R L L A+++L+++ + PS + E+ + + Sbjct: 668 ----MTDEKELAEERRLAYVGLTRARRRLFLTRAEARSLWGQHQFNPPSQFLGEIPEALI 723 Query: 757 QSHYL 761 Sbjct: 724 DWERE 728 >UniRef50_D2PLA7 UvrD/REP helicase n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PLA7_9ACTO Length = 1076 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 103/859 (11%), Positives = 233/859 (27%), Gaps = 117/859 (13%) Query: 182 PRWHRANLYQRFIETLESATTCPPGL---PSRVFICGISALPPVYLQALQALGKHIEIHL 238 H A + F + +++ L P + G SA P ++ A+G E +L Sbjct: 159 RSLHPALKTRGFTDEVQAVIGKARQLGLDPEDLSAIGQSASRPEWV----AVGDFFEEYL 214 Query: 239 LFTNPCRYY-WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF---------N 288 + + + ++ A + + E+ ++ + ++ + Sbjct: 215 QILDHEQVLDYSELIHRAVILAQQPEVQAKLREEFKVVFVDEYQDTDPGQTKLLQAIAGD 274 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELD---------AFVDVTPDNLLHNIQ 339 VG+P + + G D LL E + A LL + Sbjct: 275 GRDLVVVGDPDQSIYTFRGADVRGLLRFTEEFPTVTGEPAAQIALATTRRFGTTLLRVSR 334 Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 + + L E R+ + + ++ + E+E + D L + Sbjct: 335 NVVNRLGVPGTLDRETFERFRNPDASGCVFGPGKVEANLYSTSGAELEHIADLLRRAHVQ 394 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR-ARQSHPVLEAFISLL 458 D + D+ V+V P ++ A A +P ++ P + + L Sbjct: 395 D-GVAWHDMAVLVRSGSRSIPPLR----RALAAAGIPVDVAGDELPLSREPAVRPMLLAL 449 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + ++ L+ + LR L + + + Sbjct: 450 RAVADPATLT--VDVVRALALSPLGAMDAGQLRRLARVLR---------KRDREAAGGQR 498 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + + ++ ++ ++ +L +L R L Sbjct: 499 LPRSSDELLREALMEPLLLDEQASPAEA----------------RFVALGERLLKARNIL 542 Query: 579 AQERPLEE----------WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 +E WL R N+ + + + A + Sbjct: 543 TAGAAPDEVMWSLWSESPWLRRLRGQANSGGEVARAANRDLDSLCALFDAAGRAEEQVGF 602 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + L D R + V + T + + +++V + + +G +P Sbjct: 603 KGVSAFLSELESLEIAADN-RYDATYRENGVQLMTAHRSKGLQWRLVVVASVQEGQWPDL 661 Query: 689 LAPLGFDLMSQK------PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 + + ++R LF A+ A+++L ++ + D Sbjct: 662 RRRGSLLEPDRLGPDGLVEPLSAGALLAEERRLFYVAITRARERLIVTAVQAPEADGD-- 719 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 PS L+ EL D + L+ A ++ L + + + Sbjct: 720 QPSRLLAEL-DIPVKLVAGRPRRPLSLPGLVADLRCVLADPASSAALKRVAADKLAQLAE 778 Query: 803 AREWL----------PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMR 852 A + + P + L P+R F Q R Sbjct: 779 ATDERGYPLVPTADPDRWWGVRERTKSERPIAVPDQPVPLTGSALTTIVDCPLRWFLQRR 838 Query: 853 LQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV------EQDDAERLFRRFRAAGD 906 E + + L +A+ + D+ + + Sbjct: 839 AG------------GETPSTSAIGFGMVLHTLADAVATGTLPPDADELNGWLDKVWTQLE 886 Query: 907 LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ----SMEIDLACNG-----VQITGWLP 957 + Q +++ R + +E + VQ+ G + Sbjct: 887 FESAWISDRERVEAEQALRRFVA-WHQGRPDRRMIGSEVEFSVLLPDADHPAVQVKGRMD 945 Query: 958 QVQPDGLLRWRPSLLSVAQ 976 +V+ D + R L + Sbjct: 946 RVEQDADGKIRVIDLKTGR 964 >UniRef50_C1YL28 DNA/RNA helicase, superfamily I n=2 Tax=Nocardiopsaceae RepID=C1YL28_NOCDA Length = 714 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 99/707 (14%), Positives = 193/707 (27%), Gaps = 70/707 (9%) Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 D + + S +E V+ D L D + D+ V+V P V A Sbjct: 3 DGEVRVLLADSAAQEAAVIADTLRRAHLVD-GVPWSDMAVLVRSSTRQLP----VLRRAL 57 Query: 431 ADRYLPYAI-SDRRARQSHPVLEAFISLLS--LPDSRFVSEDVLALLDVPVLAARFDITE 487 +P A+ +D + P++ ++L+ L + + LL P E Sbjct: 58 TAASVPVAVGADDLPVAAEPIVRPMLALIRYGLAPAELDEDAARELLTSPF-------GE 110 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + + + R +D + A R G G SAQ ++ Sbjct: 111 AD-TVRLRRLVRALRRLDLDRAHDGGAHGGAPEGDASREGAREERSGAYRPSAQLLVDAL 169 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC-------RDMLNAFFL 600 E + + E+ + L R A+ E+ L +L A Sbjct: 170 RDPAELTLVDPEIAAPATRVAQALRTVRDLNARGADAEQVLWELWRDSGLADRLLRASLA 229 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR--LDQERISQRFLAGP 658 AA ++ + + ++LA + + Sbjct: 230 GGRRGAAADRDLDAVVALFESAARYCDRLPPGSPAGFLEDLAAQEIPGDSLAERAPEGEA 289 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK-----------PKRGDRS 707 V I T + + + +V + G +G +P + + Sbjct: 290 VRILTAHRSKGLEWGLVVVAGAQEGDWPDLRLRGSLLGVEELVDTDVHSADSSGAALASK 349 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 D++R LF AL A++ L ++ +G D PS + E+ Sbjct: 350 LLDEERRLFYVALTRARRTLVVTAVGGEDTDER---PSRFLNEMG---VGEPEPVSTGLR 403 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG----KAHSEFVQP 823 P + A E + A A ++ Sbjct: 404 WLSLPSLVADLRSVVTDPGAPEPLREAAATHLARLAEEGVRGADPAEWYALTPFTDDRPL 463 Query: 824 LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 V ++ F +R + + S + + +++ Sbjct: 464 AEEEDTIRVSPSQVESFTNCQLRWLLERAAGASSGDSASALGTVVHAVAVLVAQGS---- 519 Query: 884 LLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG--QSM 941 D+ A D + +++L D A + Sbjct: 520 ------TPDEISGRMDEIWADLDFGGPWQARAQRDRADTMVRKLVDWEAANDRELVVTEE 573 Query: 942 EIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVA----QGMQLWLEHLVYCASGGNGESR 997 + G++ITG + +++ D R + + + VY + G Sbjct: 574 GFRVDVGGIEITGRVDRLERDDQGRAVVVDIKTGKNKADDLARHPQLGVYQMAVLKGAFA 633 Query: 998 LFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGA 1044 + AL + + I+ RE PL P+ G A Sbjct: 634 KLGLTE--------PGGAALVQVGEKIQRAREQPQPPLSEDPDPGWA 672 >UniRef50_A8R903 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=A8R903_9FIRM Length = 729 Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 68/527 (12%), Positives = 154/527 (29%), Gaps = 92/527 (17%) Query: 257 LAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ-DVGNPLLASWGKLGRDYIYLLS 315 K R ++ + + L D VG+P + G Sbjct: 205 RKKWQRRFTYLHVDEFQDVDMLQYQIIKMLVKEDSYLCVVGDPDQTIYTWRG-------- 256 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR---SDNKRPLDPLDS 372 + F P + + + + A + + +R + D Sbjct: 257 --AQVDIIMNFEKDFPHSHTVILNENYRSTQPILQASNELIKNNRNRIEKELFTRNESDE 314 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 I E + ++L++ + RDI V+ ++ A D Sbjct: 315 RIVHFTAMDDYNEPIWVAGKILSLHHN--GVKYRDIAVLYRS-----NYLSRGLEKALLD 367 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSR--------FVSEDVLALLDVPVLAARFD 484 +++PY I ++ +S L L + F + V ++++P + Sbjct: 368 QHIPYRIYGGVRFYDRAEIKDALSYLRLLAPKVEGDDKELFKNLAVKRIINLP----KRG 423 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 I + L L Q A + Sbjct: 424 IGAKTLETLEQ---------------------------------------EAAAKDTNMY 444 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 + + G E + ++ ++ ++ L + L ++ ++ Sbjct: 445 EILKQGGFGKGKAKESIAKFVEVIEACRSCVDTISIDQLLSKVLE------DSGYMEMLR 498 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 +A + +E + I + L E++ D+E + V + T+ Sbjct: 499 NDAEIERLENLKELISDIANYVENNPDGSLLDYLQEISLYSDKEDLDNGEF---VQLMTI 555 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + + F V + + DG++P + + G + +++R L A A+ Sbjct: 556 HAAKGLEFDRVFVYSLCDGIFPNERSIN----------EGGQQALEEERRLAYVAFTRAK 605 Query: 725 QKLYISYI-GRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 ++L++S G S + + S V+E+ Q + D Sbjct: 606 KQLFLSDSYGYSYVLDKLKTTSRFVKEIPQDCLQEVGAKPRNSFASD 652 >UniRef50_B9KCT9 ATP-dependent DNA helicase n=1 Tax=Campylobacter lari RM2100 RepID=B9KCT9_CAMLR Length = 687 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 54/456 (11%), Positives = 129/456 (28%), Gaps = 89/456 (19%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL-ENRAVAGVNIEEF 358 + +G G +L+ F + + L ++ + A IE Sbjct: 251 QSIYGWRGAKIENILN----------FKEQFNNVKLVKLEQNYRSTSAILQAANELIEHN 300 Query: 359 SRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + K + D IT + E + + +L + + P +I ++ Sbjct: 301 RKRLGKTLICTKDEGEEITILQNDDEKIESFKVAREVSKLL--NSGINPSEIAILYR--- 355 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + A + +P+ + ++ IS L L + +++ Sbjct: 356 --VNALSRALEEAFSKEKIPFKLLSGIRFYERAEIKDIISYLRLLSNLNDDYSFKRIINR 413 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + + L L + E+ Sbjct: 414 P----KRNFGNASLEKLENYAKENH----------------------------------- 434 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 ++S+ S + L ++ ++ + + + + Sbjct: 435 ----LSLFESLCALQGSGFFSKKTDKELEKFILSMHKIKEKDDLLAMILALEEEFK--IK 488 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 F+ + E E + I++ + + + Y D++ + Sbjct: 489 EFYKDNPEGEDKLLNIDELYANLKDKISHGNYNG-------LDDILNEISLLNEQDGLDK 541 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 + I ++ + + F V ++G+ +G +P S +++R L Sbjct: 542 ESICIMSIHASKGLEFDYVFIIGLEEGFFPLTSES---------------SNIEEERRLA 586 Query: 717 LEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQE 750 A+ A++KLY+SY S S E Sbjct: 587 YVAITRAKKKLYLSYANSRFYKGSRTRLEKSRFFGE 622 >UniRef50_D0LIZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIZ3_HALO1 Length = 688 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 75/563 (13%), Positives = 152/563 (26%), Gaps = 66/563 (11%) Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 P Y +AL+A LL + D + K + L Sbjct: 175 PRYQEALRAYAAVDFDDLLTATVRMFDQRDDVRARWQEKFRFVMVDEYQDTNRAQLKFV- 233 Query: 281 ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS 340 + + VG+ + + G D +L D L Sbjct: 234 --KTLVAEHENLCVVGDDDQSIYSWRGADPTNIL-------HFDRMFPGARVIKLEQNYR 284 Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 + A A + N + I + E + + ++ D Sbjct: 285 STPTILRAANAVIANNVNRHGKNLWSDIADGAKIVHASATDTESEARFVAREIGDIVGTD 344 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 L RD+ V+ + + +PY + + ++ I+ L L Sbjct: 345 -NLRYRDVAVLYRS-----NIQSRLIEESLRSASIPYVMYGGQQFYERKEVKDLIAYLRL 398 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 ++ + +++ P I L+ + S Sbjct: 399 ALNQRDEIALRRVINYPA----RGIGATTLKRVEDHARASRT------------------ 436 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 S + ES + V + + + + R L Sbjct: 437 ------------------SMWRILEGASQMAESDKMRPSTVQAIENFVAIIERTRASLDG 478 Query: 581 ERPLEEWLPVCRD---MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 + + D + + AA I ++++ Q L L Sbjct: 479 GARIIDVTRRLIDEIQLYDDLRNASPSAAAAQRRI-DNVESLLRSLERHQEKRP-GLGAL 536 Query: 638 RDELAQ-RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + L + L E + V + TL + + F +V ++G+ + + P Sbjct: 537 AEYLRRLSLAVESEAGEDPGNKVVLTTLHGAKGLEFPIVFMIGLEEEILPHARTLKPQAT 596 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDY 754 + ++R L + AQ+KLY++ + R PS +QE+ Sbjct: 597 DVMD--LDHVTDVSEERRLAYVGITRAQRKLYLTRTQVRVSRGKNLPRTPSRFLQEIPAE 654 Query: 755 IGQSHYLPGDEALNCDESEARVK 777 + + + +E EAR Sbjct: 655 LLEERDIQAEERAPVSMGEARSL 677 >UniRef50_D1NAY9 UvrD/REP helicase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAY9_9BACT Length = 679 Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats. Identities = 56/463 (12%), Positives = 137/463 (29%), Gaps = 63/463 (13%) Query: 326 FVDVTPDNLLHNIQSDILE---LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSP 382 F D P + ++ + + N A + + + Sbjct: 268 FPDHFPGAKVVKLEQNYRSTTSILNAANVVIGSNANRHEKQLWSNLGDGEPVKIVTTENG 327 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + E E + + M + P L +D ++ + + +PY + Sbjct: 328 ESEAEFIGSMITQMKNDKPELRYQDFAILYRS-----NHLSRQLEQTLRRQQIPYRLVGG 382 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + ++ ++ L L + + +L +L P + ++ + L Sbjct: 383 QEFFKRREIKDAVAYLKLLVNPCDDQSLLRILGTPP----RGLAQKAVDSL--------- 429 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 + G + EL A + + L A +A+ + Y E L Sbjct: 430 KTGRRAKHKPMFELLAEEEF------QKELTPKAAAAAREFAEVYAKYKERFAEPGALAW 483 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 + L ++ D L + + +++ AI Sbjct: 484 KITEFLKEIGYL------------------DGLQRIYKDLKDAMKRRENVDEFITAITQY 525 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMN 681 + + L + LA + +++ + V + T+ + + F VV ++ M Sbjct: 526 --EERQAEPPTLEAYLENLALLEESDKVEEETGTVDAVTLMTVHASKGLEFPVVFVVAME 583 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN-- 739 ++P + + +++ LF A+ A++ LY+ +Q Sbjct: 584 RNIFPH-------------ERALEEGSVEEELRLFYVAITRARKYLYLLRAKERMQRGIT 630 Query: 740 SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 PS + L D + + ++ + A++ Sbjct: 631 RATLPSPFLHLLTDEVAERTTPEELLRPASEDEVRQAFANIFK 673 >UniRef50_B2UQR8 UvrD/REP helicase n=2 Tax=Verrucomicrobiaceae RepID=B2UQR8_AKKM8 Length = 668 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 62/486 (12%), Positives = 139/486 (28%), Gaps = 88/486 (18%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 + +G G +L E + F L + + A A + Sbjct: 245 QSIYGWRGAQISNIL-------EFERFFPNPSVIKLEENYRCTAPILDTANALIRHNLGR 297 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 R R ++ E E + + + D ++ + Sbjct: 298 RDKTLRAHKGGGEAVRLISMPGDAEEAEFIITDIEN-VRRQEGRPWEDFAILFR-----A 351 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + + +PY + ++ ++ IS L+ ++ E +L +L+ P Sbjct: 352 NTQSRIIEQTLREHKIPYRMVGAQSFFDRKEVKDLISYLATIENPQADEYLLRILNTPP- 410 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 I+E + W E G Sbjct: 411 ---RGISELTSHLVIDWSREHG-------------------------------------- 429 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP-----LEEWLPV--CR 592 W ++ + + L + + + + + LE+ + Sbjct: 430 -NSVWAALQDEEFLAALSTRARNSVQAFNELIAKYIDLFQDKETDFGDILEQLIEETGFS 488 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL--DQERI 650 + + +AE + + I ++ P LRD LAQ ++ Sbjct: 489 EYVTRLCKTEAEIQKRLVSIGDVKASLRNFWQ--------PGKTLRDYLAQVTLDKEDND 540 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 V + T+ + + F VV L+G+ +G+ P + + + D Sbjct: 541 DDVENKPGVCLITMHAAKGLEFPVVYLVGLEEGILPHKRSLEDGNC-------------D 587 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALN 768 ++R L + AQ+KL ++Y ++ S + E+ ++ + + Sbjct: 588 EERRLLYVGITRAQEKLMLTYCATRLRYGDRMPCQRSSFLSEIPPHLMEYYKWEDLMNAE 647 Query: 769 CDESEA 774 E E+ Sbjct: 648 ATEEES 653 >UniRef50_B5K795 UvrD/REP helicase n=5 Tax=Rhodobacterales RepID=B5K795_9RHOB Length = 837 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 58/551 (10%), Positives = 141/551 (25%), Gaps = 89/551 (16%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL---ELENRAVAGVNIE 356 + +G G + +L F P + ++ + + A ++ Sbjct: 283 QSIYGWRGAEVGNIL----------LFEKDFPGAHVVRLEQNYRSTGHILGAAAGVIDAN 332 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL---TPRDIIVMVA 413 + + + E + + + +M L + ++V Sbjct: 333 KDRLGKTLFTDGEDGEKVRLIGHWDGEEEARWIGEDIESMQRGTRGLDAMPLNSMAILVR 392 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 + F LPY + + ++ L S+ + Sbjct: 393 -----ASHQMRSFEDRFLTIGLPYRVIGGPRFYERMEIRDAMAYFRLAVSQDDDLAFERI 447 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL----PATGQHTWRFGLT 529 ++ P + + ++ ++ ++ +G+ L GL Sbjct: 448 VNTP----KRGLGDKAVQTIQITARTNGVNLIEGARLCVSGGLIKGRGGNALRELVQGLD 503 Query: 530 RM---------------LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 R G + + + G LA +++ + Sbjct: 504 RWHATLHGQSQSQSNGVTRGDMADDDESVIDDGPTVEVFDGASNVNHVELAEVILDECGY 563 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 E+ E + + + + L Sbjct: 564 TAHWQNEKTPEA----------------PGRLENLKELVKALENFD------------SL 595 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 + ++ +D + V I TL + + F V L G DG++P Q + Sbjct: 596 QGFLEHISLIMDNAKD---EEDDKVTIMTLHGAKGLEFPSVYLPGWEDGLFPSQRSMDES 652 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELI 752 L +++R L + A++ IS+ + + PS + EL Sbjct: 653 GLKG----------LEEERRLAYVGITRAEKHCTISFTSSRLVYGQWQSQMPSRFIDELP 702 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 + + PG + +A+ + + S W S+ Sbjct: 703 EENVEVLTPPGLYGGGFGAAGMSARANPVSEGIASTLHEKMAKADVYNS--PGWRRLQSR 760 Query: 813 AGKAHSEFVQP 823 + + + Sbjct: 761 SQQRSMSQPKE 771 >UniRef50_Q3F0Y3 ATP-dependent DNA helicase pcrA n=2 Tax=Bacillus thuringiensis RepID=Q3F0Y3_BACTI Length = 653 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 57/445 (12%), Positives = 139/445 (31%), Gaps = 71/445 (15%) Query: 321 QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFH 377 + + ++ + P+ L +Q + +N A ++ + + + I Sbjct: 264 ENILSYQKIHPETQLILLQENYRSTQNIVNASNSLVGNNKMRLEREAFSVSGVGDDIHVF 323 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 + RE + + ++ M + +D V+ F A D +PY Sbjct: 324 RFNDASREADFVARMIVNMKKATQ-CDWKDFAVLYR-----MNFQSKHLELALRDENIPY 377 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 I + ++ +S + + + +++VP I + + + + Sbjct: 378 KIVGTTSFYDRKEIKDLVSYIRASHNLTDDYALERVINVP----SRKIGKTTIEKIYAFA 433 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 +E I + + A V + + Sbjct: 434 HERRIPFFV---------------------------------ALQNIDEVAALSKINKST 460 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 + A+L+ +L+ L E +++ + D E E T IE Sbjct: 461 VAKIKEFATLMQELSQL--ALVGEFSATKFMQTLIKKTDFMGQFDKEKEEDETRIEN-VT 517 Query: 618 AIIAEGLGAQYGDAV--PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 + + L+ E+ D + + F V + ++ + + + Sbjct: 518 HLRDYARHWDAQEKEINSLAQFVSEITLDGDSDEDEEDF----VTLTSVHSAKGLEWPET 573 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 ++G+ D V+P + S +++R L A+ A ++LY+++ Sbjct: 574 FVIGLEDDVFPH------------YRSKQKLSDLEEERRLMYVAMTRAGKRLYLTHSAFK 621 Query: 736 IQDNSERF----PSVLVQELIDYIG 756 + S++ PS + E+ D Sbjct: 622 YEYGSQKPIRQKPSPFLGEIPDNYK 646 >UniRef50_C6NTI8 ATP-dependent DNA helicase UvrD/PcrA n=2 Tax=Gammaproteobacteria RepID=C6NTI8_9GAMM Length = 729 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 65/528 (12%), Positives = 136/528 (25%), Gaps = 78/528 (14%) Query: 257 LAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSD 316 L R + ++ + +L VG+ + + G LL Sbjct: 216 LEHYRERFQHVLVDEFQDTNAVQYTWLRRLAAHGRLFVVGDDDQSIYAWRGARVENLLR- 274 Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLDSS-- 373 F + P L ++ + A A I + K D Sbjct: 275 ---------FAEDFPGAALVRLEQNYRSSAPILAAANAVIAHNAERLGKTLWTAQDGGEP 325 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + + ++ + E + ++ + + D ++ VF Sbjct: 326 LELYAAYNEEDEARFVVAQIQQWVAQ--GGRREDCAILYRSNAQ-----SRVFEEILVRE 378 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY + ++ ++ L L +R ++++P I L L Sbjct: 379 GVPYRVYGGLRFFERAEIKDVLAYLRLCRNRHDDASFERVVNLP----TRGIGNVTLERL 434 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R E G+ + + + + + + A + Q V+ Sbjct: 435 RLQAREQGL-----SLWQAAGQAASPKLNAFLTLVDGLAAEIAGDELDAAVQRVIEVTGL 489 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 A L L+ +EE Sbjct: 490 RDWYARDGDRNEGRLENLDELINAARAYAFVEER-------------------------- 523 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 LS L+ + V + +L + + F Sbjct: 524 -------EALRELNPDPGNRLSEFLTH--AALEAGEGASDAWEDAVQLMSLHSAKGLEFP 574 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 VV L+G+ +G++P Q + D ++R L + A ++L + Y Sbjct: 575 VVFLVGLEEGLFPHQRS------------LEDADGLAEERRLCYVGMTRAMRRLVLCYAE 622 Query: 734 RSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 SER PS +++L + + + Sbjct: 623 SRRLHGSERASLPSRFLRDLPSDLVRELRPRARIRRPVVPTATLSPRQ 670 >UniRef50_Q5M2T6 ATP-dependent helicase/deoxyribonuclease subunit B n=33 Tax=Streptococcus RepID=ADDB_STRT2 Length = 1106 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 86/686 (12%), Positives = 196/686 (28%), Gaps = 106/686 (15%) Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLD-SSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 L ++ + S + D ++ + + EV + + +L + Sbjct: 265 NLSFARISRLLESRHDFSTVDETVTEQDKHALKVWEVVNQKEEVAQVAKSIRQLLADGK- 323 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 +DI+V++ D +SY + +F +PY + SHP++E SL + Sbjct: 324 -RYKDILVLLGDEESYKLHVGQIF----RKFDIPYYFGKEESMSSHPLVEFVDSLERIKR 378 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + +ED+L L+ + +E L +VN + I+ Sbjct: 379 YNYRAEDLLNLVKSGLYG---GFAQEDLDLFEYYVNFADIK------------------- 416 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 G + L + S D+ + L ++L+ L L L ++ Sbjct: 417 ----GRHKFLSDFTANSRDKY-----NLDQINALRSQLIEPLDKFLNSRKQKGSSLLKKL 467 Query: 583 PLE-EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + E + + M + + + + I+ + +++ + L Sbjct: 468 VVFLEAVQLPSQMFELSTKASEAEKEQNEQVWKAFTHILEQVETIFGDESLSVDDFLSIL 527 Query: 642 AQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 + VN+ ++ V LGM +P+ ++ Sbjct: 528 RSGMLACDYRTVPATVDVVNVKKYDLIQPHSAPYVFALGMTQSHFPKVGQNKSLLSDEER 587 Query: 701 PKRGDRSRRDDDRYL-----------FLEALI---SAQQKLYISYIGRSIQDNSERFPSV 746 + D+ R L A+ +A ++L +S + + SV Sbjct: 588 SRIN--EATDEHRRLDIVTQINSKRGHFVAMSLFNAASEQLVLSQPQIINESQDDM--SV 643 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW 806 ++EL+D L + ++ + L T + + + + W Sbjct: 644 YLKELLDL---GIPLVEKGRNRFEAKGDQIGNYRDLLSTVIALNSSHLDLDLDKETQTFW 700 Query: 807 LPAASQAGKAHSEFVQPLP---------------------FTLPETVPLETLQRFWAHPV 845 A K + +P P + L F+ + Sbjct: 701 SVAVRYLRKRLDKDQVLIPKVIDDVTTTKVDDQVMQLVFPEEEPLKLSATALTTFYNNQY 760 Query: 846 RAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFR--- 902 F + L++ E + ++ ++ +E + Sbjct: 761 LYFLRYVLELEEL---------ESIHPDARHHGTYLHRVFERVMGDSSSESFDDKLEKAI 811 Query: 903 -----------AAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC-NGV 950 + F E + + A + + ++ DL N + Sbjct: 812 AQTNQDQPFEILYTEDQESRFSRQILEDIARSTASVLRDNAAVKVECEEVKFDLLLANSI 871 Query: 951 QITGWLPQVQPDGLLRWRPSLLSVAQ 976 +ITG + +V + Sbjct: 872 KITGIIDRVDRLTDGALGVVDYKTGK 897 >UniRef50_A5FDD0 ATP-dependent DNA helicase, Rep family n=2 Tax=Flavobacteriaceae RepID=A5FDD0_FLAJ1 Length = 787 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 66/468 (14%), Positives = 147/468 (31%), Gaps = 88/468 (18%) Query: 306 LGRDYIYLLSDLESSQELDAFVDVTP------DNLLHNIQSDILELENRAVAGVN----- 354 L R + L + Q + + P D++ + Q+ I+ R+ + Sbjct: 239 LSRVHQNLFLVGDPDQTIYEWRGAKPEYLVEFDSMFPDTQTIIMNRNYRSTPNILKIGNH 298 Query: 355 -IEEFSRSDNKRPLDPLDSSITFHVCH--SPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 I+ + +K + H + E + + + +L+ + DI ++ Sbjct: 299 IIKNNTVRVDKDMITDKPEGFEVVHFHGKNDFEESQWIASEIKEILQAEQ-AAYSDITIL 357 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 + A +PY+I ++ +SLL L + L Sbjct: 358 YRS-----NHLSRNIEQALIKDNIPYSIFGGIRFFERKEIKDVLSLLRLIVQG-DNFSFL 411 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 + + P + ++ L L E + + L R Sbjct: 412 RMHNHPA----RGLGKKFLERLSLLAGEQNL--------------------SLLQALERN 447 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGH-LASLLMQLNIWRRGLAQERPLEEWLPV 590 + EL L + R A+ + + + + + Sbjct: 448 I-----------------------TDKELAKKGAVEFLELIAELRET-AKTKSISDLVKI 483 Query: 591 CRD--MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 D L+ + D + + + I++ +++ L + V + E++ D Sbjct: 484 ILDKSGLSELYRKDGDEDR-LENIKELVNSML--LLEKENNAPVDIIEYLQEISLYTDLN 540 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 V + T+ + + F V L G +GV P +S K +R Sbjct: 541 T--DTENQDKVKLMTIHISKGLEFPYVFLCGFTEGVLPSA--------LSVKERRA--RA 588 Query: 709 RDDDRYLFLEALISAQQKLYISYI-GRSIQDNSERFPSVLVQELIDYI 755 +++R L A+ A+++ Y++ G + ++PS + E+ D Sbjct: 589 IEEERRLMYVAVTRAEKRFYMTDSEGFNFTTGLNKYPSRFLFEIKDEF 636 >UniRef50_C0R2D4 ATP-dependent DNA helicase n=4 Tax=Brachyspira RepID=C0R2D4_BRAHW Length = 659 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 73/511 (14%), Positives = 157/511 (30%), Gaps = 75/511 (14%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSE--NAGQLFNSDGEQDVGNPLLASWGKLGRD 309 ++ L R + ++ + + + + VG+ + + G D Sbjct: 193 QENKVLNYYRNRFKYILVDEFQDTNPQQYKLIKLLTQDAENDLTVVGDDDQSIYAFRGAD 252 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL---ELENRAVAGVNIEEFSRSDNKRP 366 + +L F P+ + ++ + ++ A++ + N Sbjct: 253 VLNILD----------FEKDYPNTKIVRLEENYRCPKDIVEAALSVIKNNSNRHEKNVFS 302 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 P + I +C+S E + + + ++ D RDI+V+ + Sbjct: 303 NKPNEFKIENWICYSDLEEARSVVNEIESLF--DNGFEARDIVVLFRTNSQSRAY----- 355 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 + Y I ++ IS L L + V ++VP I Sbjct: 356 EKELRLHSINYKIVGGVGFFERIEIKDSISFLRLMTGFGDNFSVRRTINVPP----RGIG 411 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 E+ + N + D + E L + ++ YA++ + Sbjct: 412 EKSFNNFETFANSRKLTLYNAIDYIDESGLSKKAILNIK-AYKNIIEEYAVKIKEDIINE 470 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 G+ EL+ L ++ + + F D E Sbjct: 471 -------DGIHIELL--FFEFLKDIDYF----------------------SIFKGDG-NE 498 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 +T E + L + L ++ + V + T+ Sbjct: 499 RVITAEENIKELFRGFYDYKSMEANATLITFLE--ENTLYRDLNTNDEKEDYVTLMTIHN 556 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F VV + GM GV+P S + ++G D++R L + A++K Sbjct: 557 AKGLEFDVVFMTGMEQGVFPHY--------FSLEEEKG----IDEERRLCYVGITRARRK 604 Query: 727 LYISYIGRSIQDNS--ERFPSVLVQELIDYI 755 LY++Y + E+ PS + E+ + Sbjct: 605 LYLTYSKKRRVSTGIMEQIPSSFLLEIPKKL 635 >UniRef50_B1MZM3 ATP-dependent helicase/deoxyribonuclease subunit B n=3 Tax=Leuconostoc RepID=ADDB_LEUCK Length = 1171 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 93/784 (11%), Positives = 227/784 (28%), Gaps = 109/784 (13%) Query: 320 SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVC 379 +Q L F + ++ + + L+ ++ ++ E + + +++ V Sbjct: 265 AQRLAQFTKIANQQVVWQVPTQARCLDESIISVMSAWEKLGEYRQFNSENKKTNLAAFVA 324 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 + E++ + R+ +L P L RDI+++ D+ Y+ I V LPY + Sbjct: 325 ENTMVEIQEVARRIRQLLVAQPDLRLRDILILARDLTPYTGHIPEVMQQFD----LPYFL 380 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 + +HP++E ++LL RF + V+A+L +L D + + Sbjct: 381 DTDQKMTNHPLVELLLNLLRPAKERFQYQQVMAILKTGLLRPYTDGS----------LVP 430 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 G + I L + TWR L E E V+ D++ E Sbjct: 431 EGDFFDIVSYLDNYLYANQPFERTWRDLDHPFTLFTVSEDEDDEDARVVLDDKTVNRRIE 490 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF--------------FLPDAET 605 + + + ++ L Q + + + + L + + Sbjct: 491 TLRRFV--IDAFDSLQQQLNQAQTMRQAATLIILWLEKYHVTEAILSQRDTLLAAGELSR 548 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTL 664 + + + + + + L + L + S + I Sbjct: 549 SREGEEVWEMMTQTLDDIVAIDGDERFELEKFKAILVAGFEGATFSGIPNNLDQLTISEA 608 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK---------------PKRGDRSRR 709 ++S ++ + +G P QL +++ + + + Sbjct: 609 GIVQSNDYQYLFFIGGTRNNLPAQLKSRALINDAERLIVQPALQENSTPKYLQNTAQQQM 668 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 ++ LF AL +A + + +SY S + L+D + ++ Sbjct: 669 AEENLLFYGALTAATKNIVLSYPALDA-GGQISDMSPFFKRLVDAF----NITVNKVTAT 723 Query: 770 DESEARVKAHLT--CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF- 826 + + + T + +Y + + + Sbjct: 724 PATSQALLKYYVGSVRSTLGELVKIAASQQQTSAYQALRNTINQSEPERLERVLSAPNYK 783 Query: 827 ---------------TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT-EPF 870 + + L+ ++ +P+ F Q L + R + Sbjct: 784 NQTETLKPELVQALFGETLNMSISQLESYYNNPLAYFLQYGLALKERLTNRLNVAQTGTL 843 Query: 871 ILEGLS----------------RYQINQQLLNALVEQDDAERLFRRFRAAGDLP--YGAF 912 + QQL+ + + A+ ++ + G + Sbjct: 844 YHAVFEGVVQQLIIQQLSLRDISQKALQQLVADNMAEITAQPAYQMLQETGKMRATQHYL 903 Query: 913 GEIFW---------ETQCQEMQQLADRV--IACRQPGQSMEIDLACNGVQITGWLPQVQP 961 ++ + +R+ RQ ++ + V + G + ++ Sbjct: 904 AKVSEILAVNMQRAARVNHAQPKAVERLFGFPNRQSLPALVVSTPQATVHLRGKIDRLDS 963 Query: 962 DG--LLRWRPSLLSVAQGMQLW--------LEHLVYCASGGNGESRLFLRKDGEWRFPPL 1011 + W ++ L Y + +L + G F + Sbjct: 964 QDPSQVYGTIIDYKSNGKHFDWGQAYDGRQMQLLTYWQAAQLSAEQLGIEAIGGAFFAKI 1023 Query: 1012 AAEQ 1015 A E+ Sbjct: 1024 APEK 1027 >UniRef50_P44804 ATP-dependent DNA helicase rep n=275 Tax=Proteobacteria RepID=REP_HAEIN Length = 670 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 67/515 (13%), Positives = 150/515 (29%), Gaps = 77/515 (14%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 I P L K R L + ++ + VG+ A + +G D Sbjct: 187 IMLPTLLFKQNEEVRSKWQAKIRYLLVDEYQDTNTSQYELIKLLVGDR--ACFTVVGDDD 244 Query: 311 IYLLS-DLESSQELDAFVDVTPDNLLHNIQSDILELENRAV-AGVNIEEFSRSDNKRPLD 368 + S + + D P + ++ + + A + I+ +K+ Sbjct: 245 QSIYSWRGARPENMVRLRDDFPRLNVIKLEQNYRSTQRILHCANILIDNNEHVFDKKLFS 304 Query: 369 P--LDSSITFHVCHSPQREVE-VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV 425 + + + E E ++ + + +D ++ + Sbjct: 305 TIGKGEKLLVIEAKNEEHEAERIVAELIAHRFSR--KTKYKDYAILYR-----GNHQSRL 357 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 +PY IS + S ++ ++ L L ++ L +++ P + +I Sbjct: 358 LEKVLMQNRIPYKISGGTSFFSRAEIKDMMAYLRLVVNQDDDAAFLRIVNTP----KREI 413 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 L+ L + E I ++ Sbjct: 414 GTATLQKLGELAQEKHI---------------------------------------SLFE 434 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC-----RDMLNAFFL 600 ++ ++ + + L + + + P + + L + Sbjct: 435 AIFEFELIQRITPKAYDSLQKFGRWIVELNDEIQRSEPERAVRSMLSAIHYEEYLYEYAT 494 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 E + + + G + + + L+ + L R ER + V Sbjct: 495 SPKAAEMQSKNVATLFDWVADMLKGDETNEPMNLNQVVTRLTLRDMLERGEDDDDSDQVQ 554 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + TL + + F V L+GM +G+ P Q + D +++R L + Sbjct: 555 LMTLHASKGLEFPYVYLIGMEEGILPHQTSI-------------DEDNVEEERRLAYVGI 601 Query: 721 ISAQQKLYISYIGRSIQDNSERF--PSVLVQELID 753 AQ++L S Q PS + EL + Sbjct: 602 TRAQKELTFSLCRERRQYGELVRPEPSRFLAELPN 636 >UniRef50_C5RAZ7 ATP-dependent deoxyribonuclease, subunit B n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAZ7_WEIPA Length = 1188 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 125/1003 (12%), Positives = 255/1003 (25%), Gaps = 175/1003 (17%) Query: 80 IPKESAFNKQSMSWKLMTLLP-----QLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADL 134 +P S F+ ++W M P L + L++ L + KL+ Sbjct: 67 VPNVSVFSLSRLAWYYMQNDPIYQQANLSQNGLTMLVQTLLQQHKAELKLYGNLLTKQGF 126 Query: 135 FDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFI 194 Q+ + + V + + Q L L + A Q Sbjct: 127 IGQFTTQLLELKQSGLSWDDVTDIADKLTNQETLQMKLYDLATIGQSLEDELAQRGQYLS 186 Query: 195 ETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDP 254 L L +V+ L I H F N Y Sbjct: 187 SDL--------LLALKVY--------------LATEKTDISHHYFFIN---DYSQMTSPE 221 Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLL 314 L + L S + +D N G+ RD Sbjct: 222 RGLVEALITYAGGVTIALPADDGSASLTESAISENDLFYRPKN-----LGRQLRD----- 271 Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL----DPL 370 + + I + I + + +E+F ++ + Sbjct: 272 --------------AAVTHKIPVIANTIEAQRKMSSGMLAVEDFWIKYAQQGIIRDSYDA 317 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 D +I H+ +EVE + + + RD ++M D+ Y + AVF Sbjct: 318 DDAIEIWQTHTRYQEVEQMARLIRQEVAAGK-HRYRDYLLMTRDLGQYENIMPAVFARY- 375 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI---TE 487 +P + R +HP++ LL L + + DV+ LL +L + Sbjct: 376 ---EIPIFMDLDRPMSAHPLVAFLDKLLHLAPA-YTMTDVMGLLKTELLIPDGVLLADYR 431 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 E L +V I G + + + +TR + + Sbjct: 432 EALAETENYVLAKNI-AGWQWTDKTPWQYDRQALTS-DDEVTRERVASKDAQLAMIHDQI 489 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + + +L + + ++ L W NA D + Sbjct: 490 SQTVAPFLHHLQQAPTAREMARELYNFITQIGIQKRLINWRD------NAIEQGDLWSAQ 543 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMP 666 + + + +I+ + + + + L +L+D D + + V+I Sbjct: 544 QPEQVWRVFISILDDFVQVFDSEVMTLEVLQDVFTAAFDSAKYAGIPATMDQVHISESGI 603 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK------------PKRGDRSRRDDDRY 714 ++ ++ V + G + P + K + + Sbjct: 604 VQRTGYETVIVFGATNHNLPAVTRIKAILHDGDRAILQPALPDNVFLKETSEQQMAQESL 663 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 L A++ A Q+L +Y + PS V + Sbjct: 664 LMYRAMMVADQRLIWTYATSDGDG--SQQPSTYVTRIQKQFQLPLVQFDALPDPMSHHVD 721 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGERQS--YAREWLPAASQAGKAHSEFVQPL-----PFT 827 T ++ + + + W Q K +Q L Sbjct: 722 DYVGTPTSTIAQIIIANRQAKQRGTVDGQLSAAWRNLIQQVQKIAPYQLQHLLGSLHYQN 781 Query: 828 LPETV---------------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL 872 PE + + L+ + +P F Q L++ R L Sbjct: 782 EPEKLQPVLVNTLFGHDLKASISRLESYSRNPYEFFLQYGLRLQERQV---------LQL 832 Query: 873 EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC----------- 921 + + +L L + L + + G L + + Sbjct: 833 TPAEKGTLMHAMLEQLF-----QTLVTKQQVLGALTDDQLRHLEQDILQGLLTSDDPTYD 887 Query: 922 -----QEMQQLADRVI-------------------------ACRQPGQ-----SMEIDLA 946 M+ L ++ +E D+ Sbjct: 888 IFNSSSRMRFLTQQLAIQVHETMISMKRGQLLDGGVHTIGVEAGFGLPQSQLKPVEYDMP 947 Query: 947 CNGVQITG---WLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV 986 V++ G V+ + ++ + + + Sbjct: 948 FGRVKVRGKVDRYDLVETNAGNFLTIVDYKSSKRVFDYSKAYA 990 >UniRef50_D1ACX8 UvrD/REP helicase n=2 Tax=Streptosporangineae RepID=D1ACX8_THECD Length = 1059 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 128/887 (14%), Positives = 247/887 (27%), Gaps = 116/887 (13%) Query: 143 PDWLAQWETGHLVEGLGEAQA-WQAPLW-KALVEYTHQLGQPRWHRANLYQRFIETLESA 200 P L+ E V L E +A A W + L E G A + F+ Sbjct: 122 PRLLSAPEQLLEVRRLLEGEAADGAVHWPRRLHEALTTRG-----FAEELRDFMLRAAER 176 Query: 201 TTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIH--LLFTNPCRYY-WGDIKDPAYL 257 P L ++ G A+G+ + + +P Y + D+ + A Sbjct: 177 GYGPQELEELGYLKG--------RDDWVAIGRFMNRYEQRFAVDPVLTYDYTDLIEAAAA 228 Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD---------VGNPLLASWGKLGR 308 R + + ++ + VG+P + +G G Sbjct: 229 LLAEEEVRFQERAAYDAVFVDEYQDTDPAQEHLLKHLAGDGRDLVVVGDPDQSIYGFRGA 288 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLH--NIQSDILELENR--AVAGVNIEEFSRSDNK 364 D + D L + ILE R + Sbjct: 289 DV-RGIMDFPHRFPTADGRPAPVVALRECRRMSPAILEASRRIARRLPAGPSAAEHRALR 347 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 D + + SP +E ++ D L + + V+V P ++ Sbjct: 348 PRQGAEDGEVHVVIADSPGQEAALVADELRRA-HLLEGVPWSRMAVLVRSAVRQVPPLR- 405 Query: 425 VFGSAPADRYLPYAISDRR-ARQSHPVLEAFISLLSLP-DSRFVSEDVLALLDVPVLAAR 482 A A +P ++ P + F+ LL + +++ +V L L Sbjct: 406 ---RALAQAGVPVVVAGDELPLMGEPAVRPFLMLLRAALEKGYLTGEVAEELLTGPLG-- 460 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 LR L++ + E G D L +L+ + + Sbjct: 461 -GADALTLRRLKRALREVETLSGGDRPVGELLVAA------LEDPRELLLVHPKVRAPAE 513 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 +L G E++ + W L Sbjct: 514 RVAHLLQVARQGGTAEEVL-------------WNVWQASGLADAW-------LEQSAKGG 553 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL--AQRLDQERISQRFLAGPVN 660 A AA ++ L E+ + Q V Sbjct: 554 ARGAAADRDLDAVVVLFERAARFTDRMPQAGPELFVAEISGEEIAGDTIADQAPEGEAVR 613 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF----------------DLMSQKPKRG 704 I T + + ++VV + G+ +GV+P DL+++ + Sbjct: 614 ILTAHRAKGLEWEVVIVAGVQEGVWPDLRLRGSLLGVEELIEHHAGSDLADLLAEGGRGT 673 Query: 705 DR------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL-IDYIGQ 757 D++R LF A+ A+++L ++ +G D++E PS + EL + + Sbjct: 674 AAGASMAAKLLDEERRLFYVAVTRARRRLVVTAVG---GDDTEERPSRFLNELAPGALER 730 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA--REWLPAASQAGK 815 S L+ A ++A +T P R + A R P + A Sbjct: 731 SELDEKTRWLSLPALVADLRAVVTDPSRPQPLRRAAAAHLARLARAGVRGAHPDSWYAIT 790 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 A S+ T+ ++ F +R + D Sbjct: 791 ALSDPRPAFTADEQITISPSQVETFTTCGLRWLLASAVGARDGGPDELA----------- 839 Query: 876 SRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWE-TQCQEMQQLADRVIAC 934 + ++ + D R FG ++ Q ++ ++ D+ +A Sbjct: 840 TMGKVVHAVAELAGSHGDLAEEDVAQRLDEIWKELNFGSSWYSGKQREQAAKMVDKFLAW 899 Query: 935 RQPGQ------SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVA 975 + + + V I G + + + D R + + Sbjct: 900 HRANPNELVALEEDFQVELGRVVIRGRIDRAERDEHGRAVVVDIKTS 946 >UniRef50_Q6MND7 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MND7_BDEBA Length = 672 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 55/481 (11%), Positives = 143/481 (29%), Gaps = 81/481 (16%) Query: 300 LASWGKLGRDYIYLL---SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 + +G G + +L + + + + ++IL + N A++ Sbjct: 246 QSIYGWRGAEVKNILNFPQEFTPCEVIKLERNYRSS-------AEILAVANAAISKNKNR 298 Query: 357 EFSRSDNKRPLDPLDSSI-TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 + + + + + E E + +L + + +D+ V+ Sbjct: 299 HG--KILRPQVAEDTGQLPELFILDREEDECEFVVTEILNFQRQ--GYSYKDMAVLYRS- 353 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 ++ I++ + +PY IS + ++ ++ L + + +++ Sbjct: 354 NTQGGLIES----SLRRANVPYHISGGTSIFDRREIKDLMAYLKQALAP-NEVSLRRIIN 408 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 VP I + + L ++ + I + Sbjct: 409 VP----SRGIGDTSIEKLSEFALKKRINFV------------------------------ 434 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL-NIWRRGLAQERPLEEWLPVCRDM 594 A WQ + L + L P + + + +D+ Sbjct: 435 ---DACRFWQE----AGVQDKAGAAIDDLMMFIENLPKNILDFQVGSSPGAKMVQIFQDI 487 Query: 595 -LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 + A + + + + + ++ + L ++ +S+ Sbjct: 488 GYREYVYGTAADPTSAEKKWMVVEILGRILDSFLGRRSYDVENIKSFVDCMLLRDDLSEE 547 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 L V + TL + + F VV L G+ + + P + D ++R Sbjct: 548 ELENKVQLMTLHASKGLEFPVVILAGLEEDLLPHKNLGSDID---------------EER 592 Query: 714 YLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 LF + A+++L +S + ++ PS + EL + L + + Sbjct: 593 RLFYVGVTRAKKRLVMSRCQQRKKNGAVRPVAPSRFLLELPKELYTEFPLGARPVVGQER 652 Query: 772 S 772 Sbjct: 653 E 653 >UniRef50_Q2GE51 Helicase, UvrD/Rep family n=2 Tax=Neorickettsia RepID=Q2GE51_NEOSM Length = 630 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 61/459 (13%), Positives = 133/459 (28%), Gaps = 93/459 (20%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 + +G G + +L F + ++ + A NI + + Sbjct: 259 QSIYGWRGAEVGNILR----------FAKDFEGAKVIKLEQNYRSTNKILTAAHNIIKNN 308 Query: 360 RS---DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 +S P I ++E + + D ++V Sbjct: 309 QSRLTKKLWTAYPGGEEIQIFTYMDSEQEARAIIRMIKERKLL---CRYSDTAILVR--- 362 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + F F A +PY + + I+ L L + + +++ Sbjct: 363 --AGFQTRAFEEAAIHENVPYRVVGGLKFYERKEIRDIIAYLRLVVNPNDNLAFERIINT 420 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + + + L + + E G Sbjct: 421 P----KRGLGQASLNKIYNYSLEEGC---------------------------------- 442 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 +++V +E+ L + L + + Q+ W+ + L + L Sbjct: 443 -----SMFEAVRKLEENEKLKSTA---LLTFVKQVRKWQEE-SLNHSLHDLLKKITLESG 493 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 + E + +++ ++ I + V L E +Q + Sbjct: 494 YISALKEQDETRIENVDELFRVIQEFDDATDFLQHVSLLT-----------ESDAQINNS 542 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 VN+ TL + + F+ V L G DG +P + + +++R L Sbjct: 543 DAVNMMTLHASKGLEFEQVFLPGWEDGTFPHVRSLCS------------TEQIEEERRLA 590 Query: 717 LEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELID 753 + A++ L I+ R + NS + S + EL + Sbjct: 591 YVGITRAKRFLTITSAHRRLIRNSWQNTVKSRFMLELAE 629 >UniRef50_B6QHN1 ATP-depentend DNA helicase, putative n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QHN1_PENMQ Length = 1006 Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 64/528 (12%), Positives = 148/528 (28%), Gaps = 51/528 (9%) Query: 295 VGNPLLASWGKLGRDYIYL--LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAG 352 VG+P + +G + L + + + D + IL + + Sbjct: 244 VGDPDQSIYGFRSAEIKNLERMQRRYPNTSVVLLEDNYRSS------GSILGSAEQVIEQ 297 Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE-EDPTLTPRDIIVM 411 + + + + E + + + + L D ++ Sbjct: 298 DTARPVKKLHPTHGVGTMP---VLRKLPTAAAEAQWMVMEIKRCITLTGQLLKSSDFAIL 354 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 + + S + +PY + + + L + ++ + Sbjct: 355 LRSAA-----LSRQIESELGKQGIPYRMVGGSRFFDRVEIRLLLDYLRVISHPENNDALA 409 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +++VP I +E L+ L + + +V + + + Sbjct: 410 RIINVP----TRKIGDETLKSLTAGAESANLPLWTFIKDVAQGRRSCQKGLSKAANIGLS 465 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 +L +E+++ + + L ++ +R L PL+E Sbjct: 466 VLVGLIEASRQKLHDCIDESSP--------RVLLEFVISKLGFREYLTATYPLDE--ENR 515 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 + ++ + + + I + LS +A + Sbjct: 516 WANVEELLAQAGDSSTSYSQQDDILPEIEGLEQHQGHIGEEALSRFLANVALSTEVTTEE 575 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 V I T+ + + + VV + + +G+ P A D+ Sbjct: 576 GDQPQEKVTISTIHAAKGLEWPVVFVAAVYEGIIPHSRAEDS----------------DE 619 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 +R L A+ AQ LY+S R ++ E S L I ++ + L D+ Sbjct: 620 ERRLLYVAMTRAQALLYLSLPRRDSKNGEETRTSSF---LPPSIVEAKFRAIGPKL-VDK 675 Query: 772 SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 + + L H + Q W P G + Sbjct: 676 TIFAIADILGREHPSQEAIVKGLQARLPSLNDDLWTPDGDYTGDTATR 723 >UniRef50_Q04GY8 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Oenococcus oeni RepID=ADDB_OENOB Length = 1161 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 98/743 (13%), Positives = 214/743 (28%), Gaps = 84/743 (11%) Query: 187 ANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRY 246 AN+ ++ +E S T LP Q L + I++ L Sbjct: 128 ANVAEQLLEIWRSGLTASEILP--------------LHQFDDRLSEKIKVLALIETKILP 173 Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKL 306 D P + Q F S + + GK Sbjct: 174 SLKDYSLPDDALRNFATQISKIDLKNCNFYFEGFSGFTASELSLVKALISADRKTQLGKK 233 Query: 307 GRDYIYLLSDLESSQ--ELDAFVDVTPDNLLHNIQSDI---LELENRAVAGVNIEEFSRS 361 L + +S Q E + F + + + + + +N E+ R Sbjct: 234 SEIVFSLTGEQQSDQYGEGNLFYRANQLFKNEFSSARVWIVSNIRPLSESQLNFEQSWRE 293 Query: 362 DNKRPLDPLDSSI---TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 + S V + E++ + + L ++P L +DI+V+ +D Y Sbjct: 294 LETQGFTSQKRSFPQTKIVVSSDQEHEIDFVARSIRQRLVDNPKLRAKDILVLAQRLDGY 353 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 I +F LPY + HP+ +LL + F E ++ + + Sbjct: 354 KNIIPKIFDRYD----LPYFLDKDTRMSDHPLASLAENLLG-SSNEFAYERIMKIFRTGL 408 Query: 479 LAARFDIT-EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 L+ + + + L YL ++ + + +L + Q Sbjct: 409 LSWQLEDNFQTALDYLENYLLANNPKEKNWRQEEFQLIQISDEQ---------------- 452 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + + + ++ L + + L WL + + Sbjct: 453 DLNDDHKIDRQINALINRMRLFIIKILDDFQEKFAKVENYHQAVKTLYNWLTD-QQVDQV 511 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA- 656 + + + + + E L S + Sbjct: 512 LLNQANDGDDRGQQTWKLLLSTLDEVDQLIGDKKYSQKDFLQILKDGFAAASFSGIPASL 571 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD----------- 705 + + ++ FK + + +D P Q + + D Sbjct: 572 DQITVSESGIVQRNDFKALYFIDASDASLPAQTNSSSLIDDFDRLQLIDDFSKAQKPYYL 631 Query: 706 ----RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 R + + F +++SA + SY D + S ++ L + L Sbjct: 632 QDTSRQEMTAENFRFYSSVLSATDSVTFSYSKLR-LDGKQNELSPYLRRL--SLKNVSDL 688 Query: 762 PGDEALNCDESEARVKAHL--------TCLHTRMPFDPQNYQPG-----ERQSYAREWLP 808 ++ + +S+A + +L T F +R Y + L Sbjct: 689 KIEKIPDLPQSQADLVDYLGTANSSAAILSQTAQNFGEDFIDGLTDLLIKRNPYFQRILQ 748 Query: 809 AASQAGKAHSEFVQPLPFTLPE--TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 A + + + + E + + +++++++P F Q L++ R + + Sbjct: 749 ALHYNNQPVTLRPELIKKLFGEDLRLSISQIEKYYSNPYEYFLQYGLRLKKRNQFTVDAA 808 Query: 867 TEPFILEGLSRYQINQQLLNALV 889 L G + I +Q++N L+ Sbjct: 809 -----LSGTYYHSIFEQVINRLI 826 >UniRef50_A6GG96 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GG96_9DELT Length = 693 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 59/542 (10%), Positives = 138/542 (25%), Gaps = 68/542 (12%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 +P + R R ++ + + +L D VG+ A +G G Sbjct: 205 NPLTKKRWRRRFRYLLVDEYQDTNTAQFQMLLELLGEDQNLCVVGDDDQAIYGWRGAKVA 264 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 +L D + L + A A + P Sbjct: 265 NILG-------FDLYFRNAKVIKLEANYRSRPPITTCANAVIAHNTSRHDKELVPQRTGG 317 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 + V E + + D++ ++ + P+ V+ Sbjct: 318 EKVQLVVTRDGPSEAKWVADKIYQLIH-ERGARPKHCAVLYRSSRQAR-----AVEQNLQ 371 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 + LP+ + + ++ + L L V LD P I + + Sbjct: 372 EHGLPFRMLGGQPFYDKKTVKDATAYLKLLVMPSDDIAVRRALDTPA----KGIGRKTVE 427 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 + W R ++ Sbjct: 428 RMSHWAEVHQKR---------------------------------------LVDAIYHAK 448 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM-LNAFFLPDAETEAAMT 610 E G+ + L QL + ++ + ++ L L + + A Sbjct: 449 EIEGITGRPLESLERFHNQLRHAQIAASRGSVKDALRGFLDNVRLRDSVLKETGSGEATK 508 Query: 611 LIEQQWQAIIAEGLGAQYGD--AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + Q ++ + D L +++ + + + T + Sbjct: 509 VRWDSVQFLLDSVGRFEERAWNQKGKPRWSDYLGNLDLKKKDEDEAVPDAITLSTFHSSK 568 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + + V ++G+ +G P + + +++R LF + A+ +L+ Sbjct: 569 GLEWSQVFIIGVEEGTLPHKRTDAPRLSDAIAG------DLEEERRLFYVGITRARDRLW 622 Query: 729 ISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 ++ + E PS + EL + +E + + Sbjct: 623 MTRAATRVDRGRELEIKPSRFLDELPEPDSGVIEHNDTRETEKLTTETMEELASAFMSQL 682 Query: 787 MP 788 Sbjct: 683 QA 684 >UniRef50_B9KXW3 ATP-dependent DNA helicase pcrA n=2 Tax=Thermomicrobia (class) RepID=B9KXW3_THERP Length = 771 Score = 199 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 84/578 (14%), Positives = 159/578 (27%), Gaps = 91/578 (15%) Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA--S 302 + YW D + +R D + L R E + + L Sbjct: 204 QSYW-DEVAARVYERYAQYLQRAQAVDFDDLLLRTVELFTEYPDVLAHYQDRWRYLQVDE 262 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN--------------- 347 + R L+ L S V ++ Q+DI + Sbjct: 263 YQDTNRLQYQLVRQLASGHRNLCVVGDPDQSIYSWRQADIRNILEFQRDFPDATVIRLGR 322 Query: 348 ----------RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 A A + + +P I C Q+E E++ + ++ Sbjct: 323 NYRSTPQIVAAADAVIRVNRQRIERPLWTENPPGPPIRLLACWDEQQEAEMVVSEIDRLV 382 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 RDI V+ A R +PY + ++ ++L Sbjct: 383 RTG-NARYRDIAVLYRINAQSRSV-----EEALVRRQIPYQVIGGVRFYERKEIKDALAL 436 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L + + + +L A I E+ L L QW Sbjct: 437 LRVLVNPRDWLSLRRVLSE--TAFGRGIGEKTLLQLEQWGQRQQC--------------- 479 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 A V +E+ L A V L L +L R Sbjct: 480 --------------------SPADVLLLLVEEREEAPALAAATVRRLRELGGELVRLRAA 519 Query: 578 LAQ--ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 + + L + + + TE Q ++++ + +PL Sbjct: 520 MVEHPASQLFDLALERSGLAARYRDASDPTERERWENLVQLRSVLERYDTVPAAEGLPLF 579 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 L L +D+ +S V + TL + + F VV L+G+ +G+ P A Sbjct: 580 LEEAALVAAIDEAEMS----GDQVTLLTLHAAKGLEFPVVFLIGVEEGLLPHARALESEA 635 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELID 753 + ++ + F + A+++LY+SY + PS + +L Sbjct: 636 ELEEERRL------------FYVGITRAKERLYLSYCSSRNRFGLRERCLPSHFLDDLPP 683 Query: 754 YIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 + ++ + + +P Sbjct: 684 DVVEAGSRASERVPRVAPPAGGHAGPVESSAPVVPRLR 721 >UniRef50_B0VGK7 Superfamily I DNA and RNA helicases n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VGK7_9BACT Length = 732 Score = 199 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 58/460 (12%), Positives = 141/460 (30%), Gaps = 83/460 (18%) Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 G R+ + D S + + +IL L N +A + Sbjct: 268 GASLRNILEFEKDYNSVHSIRLEQNYRSTG-------NILALANAVIANNRRRHSKELWS 320 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 + P+ V + E + D +L + + + R+I V+ Sbjct: 321 ELPVGDKP---VLAVYENEIEEANRITDAILKL--QRKGIPLREIAVLYRTNAQ-----S 370 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 VF SA +PY+I ++ ++ L + + +E +L +++ P Sbjct: 371 RVFESALIQAEIPYSIVGGVQFYQRKEIKDLLAYLYVLSNLNDNESLLRIINEPA----R 426 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 I + + L G+A ++ Sbjct: 427 GIGQTSINRLI---------------------------------------GFANKTRISL 447 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE------RPLEEWLPVCRDMLNA 597 + ++ + L ++ + L W++ ++++ + + E L + N+ Sbjct: 448 FSAIQNVEAIEELGNPAKKRISEFCLMLERWQQSVSRKPALEMVKTIVEELELISHYQNS 507 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 D + + + ++ + L + + Sbjct: 508 NDPQDIARAENLVEFVTSVSEFSEHFYQENEREPL-IADYLPYV--ALQTDLDRVKENMD 564 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 + + TL + + F+ V + G+ D + P ++ D + +++R LF Sbjct: 565 SIRLMTLHNAKGLEFEAVFIAGLEDELLPHRMCMNNQDSI------------EEERRLFY 612 Query: 718 EALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYI 755 + A+ L++SY ++ PS + E+ + Sbjct: 613 VGITRAKNYLHLSYTKSRRLYDTFYFPVPSQFLTEVDSRL 652 >UniRef50_B3QYS3 UvrD/REP helicase n=9 Tax=Chlorobiaceae RepID=B3QYS3_CHLT3 Length = 765 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 52/462 (11%), Positives = 125/462 (27%), Gaps = 80/462 (17%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL---ELENRAVA 351 VG+ + + G D +L F + + + ++ + + A Sbjct: 260 VGDDAQSIYSWRGADIANIL----------GFQNDYKEATICRLEENYRCTKTILKVANT 309 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 ++ + + +T +RE E + + + D + Sbjct: 310 VISNNKEQLEKTLYTSNETGEPVTLFEATDERREAEKVAMAIRER-KLSSGNQNSDFAIF 368 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 A + Y + + ++ ++ L + E +L Sbjct: 369 YRTNAQ-----SRALEDALRFNGIAYRVFGGVSFYKRKEIKDIVAYLRFILNSRDEESLL 423 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +++ P + E L+ L+ E G + + R Sbjct: 424 RIINFPA----RGVGETSLKRLKDIAIEEGF--------------------SLYEAICR- 458 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 + + + + L+ L + + E L Sbjct: 459 ----------------ATHYDLQNRLISALNDFRMLIEDLREIAQQHTAYEVVAELLRK- 501 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 +L + A Q++ + D L+ + L ++ + Sbjct: 502 TRLLEILKNENTAEANARYDNLQEFLNFARQFCDKSAEDP-SLNAFLQ--SASLATDQDN 558 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 V + T+ + + F VV + G+ + ++P ++ Sbjct: 559 ADANGNQVTLMTIHAAKGLEFPVVFVTGLEERLFPLNPDEPRELEEERRL---------- 608 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQEL 751 F AL A++KLY+S+ + S ++EL Sbjct: 609 ----FYVALTRAEKKLYVSFAKSRYKFGQSFPAKRSRFIEEL 646 >UniRef50_A1WZS5 ATP-dependent DNA helicase UvrD n=3 Tax=Gammaproteobacteria RepID=A1WZS5_HALHL Length = 725 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 70/525 (13%), Positives = 148/525 (28%), Gaps = 82/525 (15%) Query: 253 DPAYLAKLLTRQRRHSFEDREL-PLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYI 311 DP L R ++ + + VG+ + +G G Sbjct: 203 DPELLGHYQRRFAHILVDEFQDTNALQYRWLKLLGGEQSELFVVGDDDQSIYGWRG---- 258 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPL 370 + ++ F D + ++ + A IE S K+ Sbjct: 259 ------ARVENIEHFRREMGDVRVVRLEQNYRSTGTILDAANRLIEHNSGRLGKQLWTDG 312 Query: 371 --DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 IT + + E + DR+ + E+ D ++ Sbjct: 313 WSGEPITLYAAFNEVDEARWVVDRIRQL-SEEGGYGHADFAILYRSNAQ-----SRALEH 366 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 LP+ + ++ ++ L L +R +++ P I + Sbjct: 367 ELHAARLPFRVYGGLRFFERAEVKDALAYLRLVANRHDDASFERVVNTPP----RGIGAK 422 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + +R E+ + W++ Sbjct: 423 TVDAVRYAAREADV---------------------------------------SMWRAAR 443 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 S L A LAS L +++ L +RPL + + EA Sbjct: 444 ELTGSRALAARARNALASFLERIDALDSEL-TDRPLHDQVEQVIA-RTDLRRHHERDEAR 501 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAV-PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + +++ A + D + PL+ L+ V + TL Sbjct: 502 LENLDELVTAARTFAQRDEPEDDLDPLAAFLTH--AALEAGEGQADDWEHSVQLMTLHSA 559 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F VV L+GM +G++P +++ + R +++R L + A+Q+L Sbjct: 560 KGLEFPVVFLVGMEEGLFPHRMSVE------------EPGRLEEERRLCYVGMTRARQRL 607 Query: 728 YISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 +++ + PS + E+ + Sbjct: 608 ILTHAEKRRLHGMDQLARPSRFLTEIPGEHLEEVRPRMSVRRGPP 652 >UniRef50_C8WBZ1 UvrD/REP helicase n=7 Tax=Alphaproteobacteria RepID=C8WBZ1_ZYMMN Length = 768 Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 62/512 (12%), Positives = 136/512 (26%), Gaps = 75/512 (14%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLD--SSI 374 + F + P + ++ + A I + K D + Sbjct: 275 AEVANILRFEEDFPGAKIIRLEHNYRSTPQILGAASGLITHNNARLGKTLWTERDQGEKV 334 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 E L + + + + +++ + F F + Sbjct: 335 KIIGVWDGAEEARQLVADVQNL--RRANIPLNKMAILIR-----AQFQSREFEDIFIAKN 387 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 LPY I + ++ L + +++VP + I ++ + L Sbjct: 388 LPYRIIGGFRFYERAEIRDALAYLRVIAQPTDDLAFERIVNVP----KRGIGKKAMEKLY 443 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 Q A ++ Sbjct: 444 QA---------------------------------------AFLDRIPLAEAAEKLVSEK 464 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 L +++ L L+ + WR+ L + V R ML+ Sbjct: 465 TLGSKITQSLGQLMNDFSEWRKSL----SVVSHADVTRKMLDESGYKAMLRAVNDVQSAG 520 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 + + + + L + ++ +D E + + + T+ + + F Sbjct: 521 RLENLTELARAM--EEYDDLGSFLEHVSLVMDHEND---PIDDKITLMTMHAAKGLEFDH 575 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V L G +GV+P Q + G + +++R L + A++ I + Sbjct: 576 VFLPGWEEGVFPSQRSLD----------EGGLNSLEEERRLAYVGITRAKKCCTIFHAAN 625 Query: 735 SIQDNS--ERFPSVLVQELI-DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 PS + EL D+I + L + D + + P Sbjct: 626 RRVYGQWIASTPSRFISELPDDHIEEKSLLRKKAPIWRDIWAEDRSKNPAYNSAKEAITP 685 Query: 792 QNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 R + + AA+ A S ++ Sbjct: 686 PWQLASRRGAGWQRAQKAAASPSPAVSHPLKK 717 >UniRef50_A1AVZ1 UvrD/REP helicase n=3 Tax=Gammaproteobacteria RepID=A1AVZ1_RUTMC Length = 718 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 46/427 (10%), Positives = 117/427 (27%), Gaps = 71/427 (16%) Query: 329 VTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEV 388 L + N + A + + I + + E Sbjct: 274 PIETIRLKQNYRSTGNILNASNALITHNVNRMGKSLWTDAGNGELIDVYEARTETDEANY 333 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 + + ++ +P D ++ +F A +PY I + Sbjct: 334 VISNIQKLITN--GASPSDCSILYRFNAQ-----SRIFEEALIKYNIPYIIYGGLKFFEY 386 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 ++ +S L L ++ + +++ P I ++ +R + ++ Sbjct: 387 TEIKDALSYLRLIENSADNVAFERVVNFP----TRGIGNVTVKKIRTFAQDNHT------ 436 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 +Q+ + L L+S + Sbjct: 437 ---------------------------------SLFQAAIQISSI--LPTRAANALSSFI 461 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 + ++LN L + + ++ + +I + Sbjct: 462 NLIKQITDDTKHL----NLSEKVTNLLNTSGLIMHYSNDKIGSKKENLKKLITITKQYNH 517 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGP-VNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 +S + ++ + V + T+ + + F V L+GM + ++P Sbjct: 518 EQDNKMSEVMGFISLTSLDSSGNTNASINQNVQLMTIHSAKGLEFPCVFLVGMEEDLFPS 577 Query: 688 QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPS 745 + + + D++R L + A +KL +SY + +PS Sbjct: 578 RQSKN------------EPHLTDEERRLCYVGMTRAMKKLSLSYAIKRFLYGQSLYAYPS 625 Query: 746 VLVQELI 752 + E+ Sbjct: 626 RFLNEIP 632 >UniRef50_C9LD15 ATP-dependent DNA helicase PcrA n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LD15_9BACT Length = 794 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 63/555 (11%), Positives = 157/555 (28%), Gaps = 80/555 (14%) Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE 346 VG+ + + G D +L+ F P L ++ + E Sbjct: 241 PGEARLCVVGDDAQSIYAFRGADIGNILN----------FQTHYPSAKLIKLERNYRSTE 290 Query: 347 NRAVAGVNIEEFSRSDNKRPL---DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 N A +I +++ + + + + ++ + E + + + + + Sbjct: 291 NIVQAANSIISRNKNRIPKTIYSENGAGDKVCIISAYTDKDESAKVVKEIFKLRRQHH-I 349 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 + + ++ F A + LPY + + ++ I+ + + Sbjct: 350 SLDQVAILYRTNAQ-----SRAFEDALRNAALPYRVYGGLSFYQRKEIKDIIAYCRVVCN 404 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 E +L +++ P I + + L +G Sbjct: 405 PQDEEALLRIVNYP----TRGIGQTTMSKLIAAARGNG---------------------- 438 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESS-GLIAELVGHLASLLMQLNIWRRGLAQER 582 + W +L D+ L + L + + ++ Sbjct: 439 -----------------EPLWSVLLAPDKFGVALNRRTLEKLYAFAELIRSFQARADVMG 481 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 + + + + + + Q ++ G + + LL D L Sbjct: 482 -VYDLVSELLEASGITQELQGDRTPEGLSKWENIQELLNSIKGFESEQETGVVLLADYLP 540 Query: 643 QR-LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 Q L ++ Q V + T+ + + F+ V + G+ DG++P A Sbjct: 541 QVVLLTDQDQQDDDEPKVTLMTVHAAKGLEFEAVFVTGLEDGLFPGTAAKYS-------- 592 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQSH 759 +++R LF A+ A+ +I+Y PS+ +QE+ ++ Sbjct: 593 ----ARELEEERRLFYVAVTRAKAHCFITYAKTRYIYGRLEFCEPSLFLQEIDPQYVETD 648 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTR-MPFDPQNYQPGERQSYAREWLPAASQAGKAHS 818 + + A L P ++ S+ + + + Sbjct: 649 SSSARDFSSFGHLNNGRMAGLFDAAKVDRKPAPSDFHSPTSSSFVADKAFSHRSSAFEAD 708 Query: 819 EFVQPLPFTLPETVP 833 + + Sbjct: 709 SSRTTVQQGRLRRLS 723 >UniRef50_A4F8N5 Probable ATP-dependent DNA helicase n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4F8N5_SACEN Length = 1078 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 107/805 (13%), Positives = 205/805 (25%), Gaps = 119/805 (14%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS--DILELENRAVAG 352 VG+P A +G G L + D+ LL + ++ ++L + N A Sbjct: 309 VGDPAQAIYGWRGASAAN-LPRFTTDFPKDSMAPARRYGLLTSFRNPPEVLRVANAVSAP 367 Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE--DPTLTPRDIIV 410 + + + I + ++E + + DR+ A D P V Sbjct: 368 LREAGLEVEELRAKDGAEAGDIRVALADDVRQERDWVADRIAAQWHAALDENGRPPTAAV 427 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 +V A +A DR LP + + +S L + Sbjct: 428 LVR-----RRADMADLAAALRDRGLPVEVVGLGGLLDEAEVRDLVSALRMLVDPLAGTAA 482 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 + LL +R+ + + L E G R P + T Sbjct: 483 MRLL----TGSRWRLGAADIAALWDRARELGER---------AFGAPESEDPTAAVAA-- 527 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP--LEEWL 588 L G ++ + + L +L RR L Q P + + Sbjct: 528 -ALPGEHAEQAGLVDALDDPGNAERYSEPGYQRIRRLGRELANLRRRLEQPLPELVADVE 586 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 + + P + A + + L+ Sbjct: 587 RTLLLDIESLSRPGGAGRIHLDAFADVVTDFATASPSATLPALLDYLAAAERAEDGLE-- 644 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD------------- 695 V + T+ + + ++VV L + V+P + + Sbjct: 645 PGEVEVADDRVQVLTVHAAKGLEWEVVALPHLVRDVFPGKRKASSWLRAVTELPARLRGD 704 Query: 696 ------LMSQKPKRGDR----------------SRRDDDRYLFLEALISAQQKLYISYIG 733 L + + DR R ++R L A+ +++ L +S Sbjct: 705 AQDLPRLDLDRLQGMDRKEIVEALEAHDDEFEDRRLTEERRLLYVAVTRSERSLLLSGHW 764 Query: 734 RSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 + + + PS + +L + + ++ +A P DP Sbjct: 765 WAEGGDKPKGPSDFLLQLAEVVKSPDVGVVEQWSPQPPEDAPNPLAEAVRSAEWPVDPLG 824 Query: 794 YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT---------------------LPETV 832 + A L A A + + LPE + Sbjct: 825 TRRDAVAEGANLVLAALDAVDSAAPDEEDEDGWARDVDVLLAERAAAARRRDQVRLPEHL 884 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD 892 + L RL+ + + L + LL+ Sbjct: 885 SVSQLVELADDADA--LARRLRRPLPYPPNPMTRRGTAFHSWLEHRFTSTALLDFDELPG 942 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQI 952 A+ L + LA + + GV + Sbjct: 943 AADESATPHDDLEML---------------QQAFLAGSWAERTPHRVEVPFETQVEGVVV 987 Query: 953 TGWLPQVQPDGL-----LRWRPSLLSVAQGMQLW-----LEHLVYCASGGNGE-----SR 997 G + V D + W+ + ++ L + A G + Sbjct: 988 RGRMDAVFADSDGGWTVVDWKTGAVPAGDQVRALSVQLAAYRLAWSALSGAPLEKVRAAF 1047 Query: 998 LFLRKDGEWRFPP-LAAEQALHYLS 1021 ++R D R L AE L Sbjct: 1048 HYVRHDRTLRPADLLDAEGLRELLR 1072 >UniRef50_D1B9M8 UvrD/REP helicase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9M8_THEAS Length = 653 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 63/472 (13%), Positives = 141/472 (29%), Gaps = 81/472 (17%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 VG+P A +G G D +L+ + Q +L + A + Sbjct: 245 VGDPDQAIYGWRGADVSMILNFDKDFQ-------GAKVTVLEQNYRSTGHILEGANCVIA 297 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 N I + + + L D +L + + +D+ ++ Sbjct: 298 RNSDRPKKNLWTAASRGEKIRILKARNDEEDSRCLVDWILEL--QGEGYALKDMAILYR- 354 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 + ++ + +PY + ++ ++L+ L ++ Sbjct: 355 ----VNALSRLYEQRLIEAGIPYRVIRGLGFYDRKEIKDVLALMRLAIQPRDLVSFERMV 410 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 +VP + I + L W+ + Sbjct: 411 NVP----QRGIGAKSTEALWAWMGQL---------------------------------- 432 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 A + + + G E + LA ++ + R + R + Sbjct: 433 EAQDPGEFWRSVLEGDAPLKGRAREGIRALARGMLGILSLRGNIRLA---------VRYI 483 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 L + + + E++ Q + E + ++ D L++ Sbjct: 484 LEEYGYGEHLEREDQSTFEERLQNV-EELMSVLPEGSID-----DVLSEVALFSDADVAS 537 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 V++ TL + + F VV ++G+ +G++P DRS +++R Sbjct: 538 GDDRVSLLTLHAAKGLEFPVVFMVGLEEGIFPNAKCRE------------DRSLLEEERR 585 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERF-P-SVLVQELIDYIGQSHYLPGD 764 LF + AQ++L++S R + S P S + E+ + Sbjct: 586 LFYVGMTRAQERLFLSGAARRVLFGSFMMNPFSRFLSEIPSSCVVEDDRTKE 637 >UniRef50_C8XDJ8 ATP-dependent DNA helicase PcrA n=2 Tax=Actinomycetales RepID=C8XDJ8_NAKMY Length = 864 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 62/460 (13%), Positives = 128/460 (27%), Gaps = 52/460 (11%) Query: 326 FVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLDSSITF--HVCHSP 382 F P+ ++ + + + A I + K +V + Sbjct: 320 FERDYPNAQTIMLEQNYRSTQTILSAANSVIARNPQRRAKNLWTAQGGGTRITGYVGDNE 379 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 E + + + A+++ + D+ V + +PY I Sbjct: 380 HDEAQFVGKEIDALVDAGEAV-FGDVAVFYRTNSASRSL-----EDVFIRNGMPYRIVGG 433 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 ++ ++ L + ++ +L+ P R I + + + I Sbjct: 434 VRFYERKEVKDALAYLRAVANPDDEINLRRILNTP----RRGIGDRAEACVSVFAERERI 489 Query: 503 RWGID-DDNVRELELPATGQHTWRFGLT-----RMLLGYAMESAQGEWQSVLP------- 549 +G L A ++ R +G+ ME A + Sbjct: 490 GFGEALQRTGEIPGLAARSANSLSSFAELLAGLRSEVGFGMEPADLLTAVLERTGYRAEL 549 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + + +L L+ L L L DA E Sbjct: 550 ENSEDPQDGSRLENLDQLVSVLRETTETLLAGGGLAALGLAADAGPEPGDGADAPAEPGP 609 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + E L + ++L+ D + + G V + TL + Sbjct: 610 SADEDVPPDAGDL-----------LLAVLEQLSLVADADSVPDS-AEGMVTLMTLHTAKG 657 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F VV + G DG++P Q A GD S ++R L + A ++LY+ Sbjct: 658 LEFPVVFVTGWEDGIFPHQRA------------LGDDSELAEERRLAYVGITRAMKRLYV 705 Query: 730 SYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEAL 767 + S + ++ + + D Sbjct: 706 TRAMMRSAWGQPAANPASRFLDDIPAELIEWRRTDADARA 745 >UniRef50_C2KVH9 ATP-dependent deoxyribonuclease subunit B n=1 Tax=Oribacterium sinus F0268 RepID=C2KVH9_9FIRM Length = 1162 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 131/1003 (13%), Positives = 261/1003 (26%), Gaps = 170/1003 (16%) Query: 36 LVQST---GMAQWLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMS 92 LV M + + + + N+D + F ++S + Sbjct: 38 LVPEQDTLAMQKRIVSHIENQGKGILNVDVLSFQRLYYRAFE----NTNQKSPLS----- 88 Query: 93 WKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQ-----LS------SKAADLFDQYLVY 141 L E +LR L + +Q LS S+ ++ QY V Sbjct: 89 ---------LDEMGKMMILRLILGKKKKQLSYYQREAESLSFVEECKSQISEC-MQYKVS 138 Query: 142 RPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESAT 201 P+ L + A +++ + Y R L + I L Sbjct: 139 -PEDLRKCAEKSKRSITRAKFLDLAYIYEEFLLYL--SRTGRITEEGLADQGISALWKDN 195 Query: 202 TCPPGLPSRVFIC-GISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKL 260 T L + I G + P+ L ++ L + + + L Sbjct: 196 T----LKDSILIFDGFTGFTPIQLLCIEVLMEKAGELYFSLEFSGKNISALGNGKKRESL 251 Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESS 320 E E L ++ + G Sbjct: 252 FYLTEEAIKELYHRGEKLGVEILSPLSLNEIDSRTG------------------EARPEG 293 Query: 321 QELDAFVDVTPDNLL--HNIQSDILELENRAVAGVNIEEFSRSDNKR--PLDPLDSSITF 376 L F + L +Q + E + E +S L I+ Sbjct: 294 ALLPRFEKIPALQTLVEGFLQGENKESGTKEEQSPKTESMDKSKPYTGGVYPSLPHGISV 353 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 + REVE + ++ E+ ++I V++ D++ Y F +P Sbjct: 354 IEAANISREVEEACSHIRYLV-EERGYRYQEIGVVLPDVELYRD----AFFQQGRKFAIP 408 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG-LRYLRQ 495 + + P + S L + + + + L + EE + L Sbjct: 409 LFLEEDIKLFDSPFSKVLRSALEVMEKGLLYDSFFRYLR---AFPYRGMEEEDRIDALEN 465 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 G++ + + ++ A+ + + + S Sbjct: 466 EARAKGLKG--------------------KSAFRSLFQEESLLEAEALFSLLEENEGSHS 505 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 L + L + L LEE ++ ++ Q Sbjct: 506 --------LKERIESLESFTEKLMALFQLEEEAIFLKN------EGMDSLSQSLERSVSQ 551 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKV 674 Q ++++ V L E++ Q V + L R K Sbjct: 552 IQLLLSKMKEGLGEIPVNKKEFSAFFDMALSLEKLRQIPATNDQVLVGDLTRSRFHNPKA 611 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQK---------PKRGDRSRRDDDRYLFLEALISAQQ 725 LG N G+ P +K + A +S ++ Sbjct: 612 FLFLGFNAGLIPLPPKKKSLFTEEEKSFLRQEHCTLSPLAWEESYIQEFYLYHAFLSPKE 671 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 +LY+SY R + S ++QE + + + + +S ++ K L+ Sbjct: 672 ELYLSYPLRIPKGRGGI--SPILQEALRLFPKLKIRKLEREIQEMQSFSQAKDSLSKELP 729 Query: 786 ---------------RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE 830 F +++Q E+ + +A + LP + Sbjct: 730 KLCKKEVLFRSEEEVLPYFHLESFQLLHSLWQKEEYKKDLEKLLEAIFWENRHLPLSKEL 789 Query: 831 ---------TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQI- 880 + L+ F + L + R E F L L + Sbjct: 790 SKGLYGEKIRGSVSRLEGLNRCAFFHFLRYGLHLQERKEAEIQA----FDLGNLYHKLVE 845 Query: 881 -------------------NQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC 921 Q+ LN + + + + F F G F F E Sbjct: 846 SFFKKLKEEKLKGEVLSEHFQEYLNFAIAESEQDPEFAPFLEGGRNQ--YFLHKFKENAK 903 Query: 922 QEMQQLADRVIACRQPGQSME--IDLACNGVQITGWLPQVQPD 962 + L ++ +++E + + G + +V Sbjct: 904 TILWVLERQLSGGDFQVEALERDFHYESDTLSFRGRVDRVDSY 946 >UniRef50_A8YVK1 ATP-dependent helicase/deoxyribonuclease subunit B n=27 Tax=Lactobacillus RepID=ADDB_LACH4 Length = 1160 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 82/634 (12%), Positives = 183/634 (28%), Gaps = 83/634 (13%) Query: 333 NLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS--SITFHVCHSPQREVEVLH 390 + L D + E + E S + +D + S E + Sbjct: 257 SFLQERDMDYVASEFPIPSEPTPREILNSLWTETVSKVDELKQVQLVKADSRYAEAYFVA 316 Query: 391 DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 + + + RD +++ D+ Y ++ + +P+ ++ + HP+ Sbjct: 317 RTIYQQVALN-NYRYRDFLILAPDLKEYETYLTPI----LRQNNIPFFNDLQQEMKYHPL 371 Query: 451 LEAFISLL---SLPDSRFVSEDVLALLDVPVLAARFDITEE----GLRYLRQWVNESGIR 503 + +L L ++ F ++ +LA+L +L + E + L +V GI Sbjct: 372 VVLIENLFNLRDLKENPFQTQSMLAILKTHLLIPSWYKEEAEYIHDVDELENFVLAHGIN 431 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG--EWQSVLPYDESSGLIAELV 561 + + + + L ++ A V + Sbjct: 432 HNLWKKHFADFVSAEVIR------LDKIDEEVAKIDRLRGYLVDKVTNLFTKLEQEKDSQ 485 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 L + LE+W + D + + ++ Sbjct: 486 KALTIFFD----FLTKNGIAERLEQWRDAANN------AGDLQQAQQPEQLWDLLIQLLK 535 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGM 680 + L + L + L + SQ VN+ + +++ +K V ++G Sbjct: 536 DYLAINP-EKFDLDEFFNMLISAFKEATFSQIPSTLDAVNLSEMGMVQTSGYKQVFIIGA 594 Query: 681 NDGVYPRQLAPLGFD----------LMSQKPKRGDRSRRD--DDRYLFLEALISAQQKLY 728 G P GF D R + D Y F +L AQ ++Y Sbjct: 595 TSGNLPSIEKKPGFLTTENLNQLQSSFESDAYLEDNQRLNNLDQNYQFGLSLALAQDRVY 654 Query: 729 ISYIGRSIQDNSERFPSVLVQELIDYIGQSH-----YLPGDEALNCDESEARVKAHLTCL 783 ISY + N + PS+ Q L DY E L+ + +L + Sbjct: 655 ISYPVLNA-SNEKLDPSIYYQRLQDYGAPEFSQHDLPEKMQELLSFITNPDASLGYLAYI 713 Query: 784 HT---------RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPL 834 ++ + + + + E + + + Sbjct: 714 NSNTSDEAIDELLKITQKYLPQKVKAVLDASDFDN---QPEDIGEDLAAELYGKNLYSSV 770 Query: 835 ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDA 894 L+ F+ + F L++ R E+ + + + + LV++ + Sbjct: 771 SQLETFYENSYEYFLTYGLKLRRRLENEF---------DVIQAGNYFHETFDRLVKRLNE 821 Query: 895 ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLA 928 + + + E Q +++ + Sbjct: 822 Q----------HIDLADLSSVELEQQLNQVRDVI 845 >UniRef50_Q256I8 DNA/RNA helicase n=17 Tax=Chlamydiales RepID=Q256I8_CHLFF Length = 636 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 54/467 (11%), Positives = 140/467 (29%), Gaps = 80/467 (17%) Query: 293 QDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL---ELENRA 349 VG+P + + G + +L+ F P + ++ + + N A Sbjct: 237 FAVGDPDQSIYSWRGANIHNILN----------FEQDYPQARVLRLEENYRSYGNILNAA 286 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 A + N R + I + + + E E + + + + + RD Sbjct: 287 NALIQNNASRLKKNLRSVKGPGEKIRVFLGKTDKDEAEFVASEIYRLHKR-SNIPLRDFC 345 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 + F F A R +PY I + ++ ++ L + ++ Sbjct: 346 IFYRT-----NFQSRTFEDALLRRRIPYEILGGLSFYKRKEIQDILAFLRMFTAKCDVVA 400 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 +++P + + + L + + R L Sbjct: 401 FDRTVNLP----KRGLGPSAISSLIDYALTNN----------------LPILEACRNALE 440 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ-ERPLEEWL 588 + + + +G W + + + + +++ + + L + E+ Sbjct: 441 THSVKLSKKQQEGLWSYLSIFQQLERAYTLPLNEFVIATIRITGYLQVLKEDPDTFEDRK 500 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 ++ + F E E ++ + + L Sbjct: 501 SNLDELASKTF------EWEQQNTEGTLESFLDDLA--------------------LKSS 534 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 +A VN+ T+ + + F++ ++G+ + ++P + +G+ Sbjct: 535 TDETELIADRVNLMTIHNGKGLEFRIAFVVGLEENLFPHANS------------KGNYEN 582 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELID 753 +++R L + AQ LY++ PS ++E+ Sbjct: 583 LEEERRLCYVGITRAQDLLYLTAAQTRFLWGTVRVMKPSRFLKEIPR 629 >UniRef50_A3CVM8 ATP-dependent nuclease subunit B-like protein n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CVM8_METMJ Length = 1049 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 113/744 (15%), Positives = 210/744 (28%), Gaps = 119/744 (15%) Query: 306 LGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKR 365 L RD ++ L + P D L AV + + RS Sbjct: 215 LERDLLFSLRESAEEFHYSIPYTGNPAIFT----DDGEWLHPDAVISGDAPDTRRSRLAA 270 Query: 366 PLDPLD-----SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + + + EV + + ++ + P +I V D S P Sbjct: 271 LFSRSEPVDCCGFVRLAERRDREGEVRAIAQEIRDLVAA--GVRPDEIAVAFPDFASALP 328 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +++ VF +PYA SD RA + P++ A + + +P + EDV+AL P L Sbjct: 329 YVEEVFPDF----GVPYAASDGRALSASPLVRALLDVAMVPARGYRREDVVALATSPYLP 384 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 L + E+ I G D+ + L A G Sbjct: 385 FTGGCE------LDIFSREARITAGNWDERLAALARAA---------------GEERGRP 423 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + E I + L L+ L + L + R +L + Sbjct: 424 DTPESAKSRLAEKVAAIESARKTVRELFADLSA----LEATKTLAGHIAAYRSVLERWQA 479 Query: 601 PDAETEAAMTLIEQQWQAI---------IAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 P + L+E + + + + + + L+ LAQ R Sbjct: 480 PAMPEDGDPDLLEDEARNLGGFSGILAALERLARLLPDEKMSLAEFSSLLAQVAAGTRTG 539 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD- 710 +R G V + + + + + + G+ +G PR L F ++ + G RSR D Sbjct: 540 RRRSNGGVRVVGVREVAHLAVPYLFVGGLVEGTMPRLTTRLPFTTDAETRRLGTRSREDI 599 Query: 711 --DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 ++RY F AL+SA+ ++Y+SY S V + + + D + Sbjct: 600 LREERYYFTAALLSARTRVYLSYPAAEGAT--PLVHSGFVDAVREAFSPETWGSNDFPDS 657 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHS---EFVQPLP 825 + R A L + + E + + + + Sbjct: 658 GLAAARRAGALLARGEFPVGMPCPIPVREAVRRLNIENYHRKAGYDSPYDGMLDDDPAIL 717 Query: 826 FTLPET------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 L E L+ + P R + + L + E L R Sbjct: 718 AALAERFGEGAVFSPTALETYADCPFRFYLERVLGLAPLPEADPD-------LTAQERGS 770 Query: 880 INQQLLNALVEQDDAER--------LFRRFRAAGDLPYGAFGEIFWET------------ 919 + ++ + R D +ET Sbjct: 771 LVHRIAYRFYSGWTCDGNGPVTGACYADALRRILDAGREEADRFTFETPAWAADKEHLLG 830 Query: 920 -------QCQEMQQLADRVIACRQPGQSMEIDLAC----------------------NGV 950 + + V A R + E+ + Sbjct: 831 SPAAGKGVLERFLRHEAEVAASRFVPHAFEVSFGLPLVPGEVDAVSIPDAVAIPLGEETI 890 Query: 951 QITGWLPQVQPDGLLRWRPSLLSV 974 ++ G + +V R+ + Sbjct: 891 RLRGRVDRVDVLTDGRFMITDYKT 914 >UniRef50_A6GB18 ATP-dependent DNA helicase PcrA n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB18_9DELT Length = 845 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 74/534 (13%), Positives = 150/534 (28%), Gaps = 75/534 (14%) Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL---E 344 S VG+ A +G G D +L+ F D P + ++ + Sbjct: 288 PSAQLCVVGDDDQAIYGWRGADVKQILN----------FPDRHPGCEVIRLEQNYRSTTH 337 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 + + A A + S H + E + + R+ + D + Sbjct: 338 ILDCANAVIRGGARRHSKRLWSDLGPGERAELHGFADERDEAQYVARRVRRAI--DEGES 395 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 P +I V P A + Y + ++ I+ L L + Sbjct: 396 PGEIAVFYRTHAQSRPL-----EEAMRLAGVRYRMLGGIRFFDRREIKDLIAYLRLLTNP 450 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 D L +++VP I + L W Sbjct: 451 GSDLDCLRVINVPA----RRIGARTIERLSAWA--------------------------- 479 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 + ++ A G + V L+ L L+ Sbjct: 480 ------ISKESSLYDACGPASKHGEEAGLGRAAVKAVKGFWELVEGLRDDSEELSHHETA 533 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 L R F + + E + + ++ + E Q V L+ ++++ Sbjct: 534 SLVLG--RTNYLESFAAEQDAETRTENLYE-FRGALEEFGEEQPD--VSLAEYLEQISLA 588 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 + + + + T+ + + F V L GM + V+P + + Sbjct: 589 AGGDEATVDA---AITLMTIHSAKGLEFDRVMLTGMEERVFPHVRSLDPENPKG------ 639 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLP 762 R +++R L A+ A++ L +S++ R S + PS ++ L + L Sbjct: 640 -REALEEERRLAYVAISRARRWLSLSFVERRFLWGSTQLNEPSRFLRALPEEGIVRKGLA 698 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 + + A + + DP+ G +A Sbjct: 699 LKQNKQRARALAP-RRREPSWDDDIELDPEYRDDGSIGRVRTRSTRSARSKRTE 751 >UniRef50_Q4A5L9 Atp-dependent helicase n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A5L9_MYCS5 Length = 734 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 54/463 (11%), Positives = 147/463 (31%), Gaps = 59/463 (12%) Query: 326 FVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLDSS--ITFHVCHSP 382 F ++ ++ + ++ + A A I+ +K + D I F+ + Sbjct: 278 FENIFENSKTIVLDTNYRSTKKILASANKLIKNNKNRFSKDLITNNDEGNDIEFYHAFNT 337 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + E + + ++ + ++ + ++I+++ + F A + Y I + Sbjct: 338 EAEAQWVISKIKLLKKQKHQI--KNIVILYRS-----NYYSRAFEDALLGEGINYKIFNG 390 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 ++ ++ L ++ S + +++VPV I + + + + ++ I Sbjct: 391 YKFYQRTEIKDVLAFLKTILNK-DSIALKRIINVPV----RGIGPKTVEKIEAFAEKNKI 445 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 + L + E ++ Sbjct: 446 --------------------SLYDAL------------------FTHFKELPLGKEIILK 467 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 + + L + + ++++ PL + LN + + + + +I+ Sbjct: 468 KIYPFIKILRKY-QLISEKYPLPVITQKLLEELN-YLEQIKGNQNENQNAIENVKELISV 525 Query: 623 GLGAQYGDAVPLSLLRDELAQ-RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 + + + D L Q L V++ T+ + + F V ++G+ Sbjct: 526 SMKNYFETNKE-ATAIDYLNQVSLLSTTGEDVEGDDFVSLMTIHASKGLEFDNVFIVGLT 584 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD--N 739 +GV+P K K +++R L A+ A++ L++S S+ Sbjct: 585 EGVFPNYKHLEDAKENKHKTKTELNKGIEEERRLAYVAITRARKNLFVSDSRGSVYAPII 644 Query: 740 SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 E+ S ++E+ + E + Sbjct: 645 HEKQTSRFIREMGIDFESFLVDKTSKFSRYLSEEENKNIKIIV 687 >UniRef50_C0QC97 PcrA1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC97_DESAH Length = 619 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 66/521 (12%), Positives = 143/521 (27%), Gaps = 100/521 (19%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 + + + ++ + L + ++ L + +G D+ Sbjct: 184 LLKTRDILRDFPEIQQRYKQQFTHILVDEYQDTNNLQDELTRLLLG------------DH 231 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLH----NIQSDILELENRAVAGVNI---------EE 357 L + Q + F ++ L + I LE + I Sbjct: 232 GNLFCVGDDWQAVYGFRGSNVNHFLQFSNRYDNARIFRLEENYRSADEIVQAANGLIDFN 291 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + D K + H S E E + RL A+ + + I V+ Sbjct: 292 ADKMDKKCFSQKKGGVVEIHEFFSEGEEAEWVAKRLKALNCKGEGIDFDKIAVVYRT--- 348 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 F F +PY + + + S LS +++ P Sbjct: 349 --KFCSLAFEKIFRMFKIPYRLMGAQGFFERMEILDINSYLSAAQFPNDDVSFERIINTP 406 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + I ++ + G Sbjct: 407 ----KRGIGPAMVKKI----------------------------------------GTMK 422 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP--VCRDML 595 E + + L ++ G L+ LL L+ L + +E L D L Sbjct: 423 EEGMSLSGAARKMVQERVLTPKIHGELSKLLELLDSLWD-LPPNQAMERVLDGTAYFDYL 481 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 +AE + IEQ + +Y + L + ++ + Sbjct: 482 KKKVKTEAEFISKKENIEQLVYTAREKSTILEYLEEAAL----------IREDTKDEDDD 531 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 V + T+ + + F V ++G + ++P + ++R L Sbjct: 532 GEGVALLTIHSAKGLEFDTVFVVGCEEKLFPHWRSID-----------AGEQAIQEERRL 580 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 A+ A++ LY+S+ + + S + ++ + + Sbjct: 581 MYVAMTRAERFLYLSHA--NYRKGQFAMRSRFIDQIEECMA 619 >UniRef50_C6V4L3 DNA helicase II, UvrD/Rep family, N-terminal n=4 Tax=Alphaproteobacteria RepID=C6V4L3_NEORI Length = 481 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 59/459 (12%), Positives = 131/459 (28%), Gaps = 93/459 (20%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 + +G G + +L F + ++ + A N+ + + Sbjct: 110 QSIYGWRGAEVGNILR----------FAKDFEGAKVIKLEQNYRSTNKILTAAHNVIKNN 159 Query: 360 RS---DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 +S P I ++E + + D ++V Sbjct: 160 QSRLTKKLWTAYPGGEEIQIFTYMDSEQEARAIIRMIKERKLV---CRYSDTAILVR--- 213 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + F F A +PY + + I+ L L + + +++ Sbjct: 214 --AGFQTRAFEEAAIHENVPYRVVGGLKFYERKEIRDVIAYLRLVVNPNDNLAFERIINT 271 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + + + L + + E G Sbjct: 272 P----KRGLGQASLNKIYNYSLEEGC---------------------------------- 293 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 +++ +E+ L + L + + Q+ W+ + L + L Sbjct: 294 -----SMFEAARKLEENEKLKSTA---LLTFVKQVRKWQEE-SLNHSLHDLLKKITLESG 344 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 + E + +++ ++ I + V L E +Q Sbjct: 345 YISALREQDETRIENVDELFRVIQEFDDATDFLQHVSLLT-----------ESDAQINNT 393 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 VN+ TL + + F+ V L G DG +P + + +++R L Sbjct: 394 DAVNVMTLHASKGLEFEQVFLPGWEDGTFPHARSLFS------------TEQIEEERRLA 441 Query: 717 LEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELID 753 + A++ L I+ R + NS + S + EL + Sbjct: 442 YVGITRAKRFLTITSAHRRLIRNSWQNTVKSRFMLELAE 480 >UniRef50_B0RZV9 ATP-dependent DNA helicase n=2 Tax=Finegoldia magna RepID=B0RZV9_FINM2 Length = 725 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 54/521 (10%), Positives = 145/521 (27%), Gaps = 95/521 (18%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSEN-AGQLFNSDGEQDVGNPLLASWGKLGRDYI 311 +P K R + ++ + + + +D VG+ + +G G + Sbjct: 202 NPDLREKYSDRFKYVFVDEYQDTNDTQYKLIKNLVSKNDNICCVGDSDQSIYGWRGANIQ 261 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSD------ILELENRAVAGVNIEEFSRSDNKR 365 + F + + ++ + IL+L N + ++ + + Sbjct: 262 N----------IQNFEKDFKNAKVILLEQNYRSTQPILDLANTVIKNNSLRKDKNLWTAK 311 Query: 366 PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV 425 + D I + +S E + + + E ++ ++ + Sbjct: 312 --NEGDMPI-YRRMYSDIDEADQVVQWIEQ--ERYRENPYEEMAILYRTNAQ-----SRL 361 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 F +P + ++ +S L + ++ + + +++ P + I Sbjct: 362 FEERLNRLGIPNRVVGGLKFYDRKEIKDCVSYLRIVENLNDNMALNRIINEP----KRGI 417 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 + + L Q I + Sbjct: 418 GKTTMDKLLQCSQNRSISMMQYIID----------------------------------- 442 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIW-RRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 + L + + + + +E L N + + Sbjct: 443 -----TDLPDFSNATAKKLQEFYYLIKSFPKDQMNVAELMEYILDKTGYRANLEKSTNRD 497 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 + + I++ ++ Q L + L + V++ T+ Sbjct: 498 DKTRLENIDEYVSSL---YQFVQDNPDKNLREYLE--TSSLMTDLDKTDDNTKGVSMMTI 552 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + + F VV G+ +G P ++ +++R L A+ A+ Sbjct: 553 HAAKGLEFDVVFFTGLEEGTIPSRVDED----------------VEEERRLCYVAITRAR 596 Query: 725 QKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPG 763 +KLYI+ + + N + S ++E+ + Sbjct: 597 KKLYITSVQSRRRFNEFQTKAESRFIEEMENKYKDESPNKE 637 >UniRef50_C6NVE2 ATP-dependent DNA helicase Rep n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVE2_9GAMM Length = 663 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 88/620 (14%), Positives = 172/620 (27%), Gaps = 89/620 (14%) Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 LV + Q A Q I ++ P +P R + L + Q Sbjct: 121 LVRNLLREMQGPSDLAESIQARISKAKNDGHGPEDMPIRDRLD---ELAQRVYRPYQRAL 177 Query: 232 KHI---EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 K ++ L P + + + ++D +R +N + Sbjct: 178 KACNSVDLDDLILLPTELLSRFAEAQERWQERIRYLLVDEYQDSNGAQYRLLQNLLKKRQ 237 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL-EN 347 + + + SW D + L+ PD L ++ + Sbjct: 238 NLTAVGDDDQSIYSWRGAAADNLQRLAQ------------DFPDLRLIKLEQNYRSTGRI 285 Query: 348 RAVAGVNIEEFSRSDNKRPLDP--LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 A I K+ I V E E + + +L + Sbjct: 286 LQAANHLIAHNPHLFEKKLWSSLGEGDRIQVIVARDETDEAEQVVNAILRDRFQRQG-EY 344 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 RD ++ P F +A + +PY +S + + F++ L + Sbjct: 345 RDYAILYRSNHQSRP-----FETALRNARIPYQLSGGISFFERSEIRDFLAYCRLLANPD 399 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 L ++ P R I L L + Sbjct: 400 DDAAFLRAVNTP----RRGIGSATLETLGEHAKARQ------------------------ 431 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 M W+ L E + L S LN A+ + Sbjct: 432 -----------MSLFAALWEEDLDLAE------RPLLALRSFGDWLNRTAEACARSELMP 474 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG--AQYGDAVPLSLLRDELAQ 643 + ++ +L + E + + ++A Q L+ L + L+ Sbjct: 475 TLRDLLEEIGYRRYLENEGDEREARRKWENLEELLAWMARLLEQEDGPKNLAELLNRLSV 534 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 ER + + TL + + F V L+G+ + + P + + Sbjct: 535 IHILERDEDDEERDVLRLSTLHGAKGLEFSRVFLVGVEEELLPHRNSETP---------- 584 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYL 761 ++ +++R LF + A+ KL +SY R + + PS +QEL + Sbjct: 585 ---AQIEEERRLFYVGVTRARHKLSLSYCRRRKRYGEAQAPEPSRFLQELPRELLDWASG 641 Query: 762 PGDEALNCDESEARVKAHLT 781 ++ + L Sbjct: 642 AEEQEALSATAACSRLRALL 661 >UniRef50_C3XD55 ATP-dependent DNA helicase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XD55_9HELI Length = 711 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 47/441 (10%), Positives = 133/441 (30%), Gaps = 66/441 (14%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNK--RPLDPLDSSI 374 + + + F + + ++ + E +A I + +K + + Sbjct: 259 ANIENILDFDAQFENTKIVKLEQNYRSTEEILTIANNLISHNTTRYDKILKATRHNGKKV 318 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + H + E++ + + + ++ + + DI ++ +++++ ++ F Sbjct: 319 QYIKSHDDKAEMKQIIESIQTLIAQGE--SYNDIAILFR-LNTFARHVEECFNRT----K 371 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 + + + ++ ++ L L + + + +++ P + I E+ + Sbjct: 372 ISFKMVGVIRFYDRQEIKDVLAYLRLALNLDDNFSLERIINQP----KRSIGEKTFGDI- 426 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + + + ++ L + H Sbjct: 427 ---VAASMHYTSIYAAWKQGGLSSLKCH-------------------------------- 451 Query: 555 GLIAELVGHLASLLMQLNIWRRGLA-QERPLEEWLPVCRDMLNAFF--LPDAETEAAMTL 611 L+ + R L + + + E Sbjct: 452 -------AKLSEFFTLIESLRECLQLNPSEIPHFFKTKIKLYADDIPTKDSESNEDRRKN 504 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 +++ + ++ + GD + + S + V ++ + + Sbjct: 505 MDELFATLLDFIECERGGDYASNEEIIQAFLNDIALSSSSDIEDSNHVLCMSVHNSKGLE 564 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 FK V ++GM G++P F MS + D++R L A A+ L +SY Sbjct: 565 FKHVFVIGMEQGLFPLMN----FYEMSIDSVDKNTQNLDEERRLAYVAFTRAKDTLTLSY 620 Query: 732 IGRSIQDN--SERFPSVLVQE 750 + + E PS + E Sbjct: 621 AKKRMHHGRYREFEPSQFLVE 641 >UniRef50_Q89A21 ATP-dependent DNA helicase rep n=2 Tax=Buchnera aphidicola RepID=REP_BUCBP Length = 670 Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats. Identities = 62/422 (14%), Positives = 132/422 (31%), Gaps = 73/422 (17%) Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 IL++ N ++ + + + + + + E V+ L+ + + + Sbjct: 279 RILKVANALISNNLHFFNKKLFSNLDYGSI---VEIISAKNEEDEARVILQTLM-LHKSN 334 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 +D ++ + +F +PY I + S P ++ I+ L L Sbjct: 335 YNAQYKDYAILYRS-----NYQVKIFEKFLIKFKIPYKILANISFFSRPEIKDLIAYLRL 389 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 + + L +++ P+ I L+ L++W + Sbjct: 390 IINPDDNAAFLRVVNRPL----RGIGAVTLQKLKEWSKKRN------------------- 426 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN--IWRRGL 578 + M S +S+LP + L + + ++ L Sbjct: 427 ------------QSFFMASLDIGLESILPVHN--------LKSLQEFVYLIQTISYQIQL 466 Query: 579 AQERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG-AQYGDAVPLS 635 LE+ + L A++ I II E + Sbjct: 467 NPIEVLEKLVATIKYEKWLMRSLKFSKLYVASIKNISIVLNWIINELKYKIMNSKKFVMK 526 Query: 636 LLRDELAQRL--DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L D +++ + + V + TL + + F V ++G+ +GV P Sbjct: 527 YLIDIISEFILQNSLNEDIVINNDYVQLMTLHASKGLEFLYVFIVGVEEGVLPYYRNT-- 584 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQEL 751 + D++R L + AQ+KL++SY + Q PS ++EL Sbjct: 585 ----------TMENNIDEERRLAYVGITRAQKKLFLSYAIQRCQYGVVINTKPSRFLREL 634 Query: 752 ID 753 Sbjct: 635 PQ 636 >UniRef50_A6VEA1 ATP-dependent DNA helicase Rep n=102 Tax=Proteobacteria RepID=A6VEA1_PSEA7 Length = 706 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 62/479 (12%), Positives = 133/479 (27%), Gaps = 72/479 (15%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAV-AGVNIEEFSRSDNKRPLDP--LDSSI 374 + L + P + ++ + A V I K+ I Sbjct: 290 ARPENLMQLKEDFPSLKVVMLEQNYRSTSRILKCANVLIANNPHVFEKQLWSEMGHGDPI 349 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 C + E E + +L + + ++ + Sbjct: 350 RVIRCRNEDAEAERIAMEILTLHLRTE-RPYSEFAILYR-----GNHQAKLMELKLQHHQ 403 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +PY +S + ++ +S L + L +++VP R +I L L Sbjct: 404 IPYRLSGGTSFFGRQEVKDLMSYFRLLVNPDDDNAFLRVINVP----RREIGSATLEKLG 459 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + + I YA G + Sbjct: 460 NYATQRNISM------------------------------YAACDEMGL---------AE 480 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC-----RDMLNAFFLPDAETEAAM 609 L + L ++ RR A+ P+ + + L D E M Sbjct: 481 HLDSRFHERLQRFKRWMDGIRRQCAENEPIAVLRSMVMDIDYENWLRQNASSDKVAEFRM 540 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + + +A+ + GD + + + + + + + A V + TL + Sbjct: 541 SNVWFLIEALKNTLERDEEGDMTIEQAIAKLVLRDMLERQQEEEEGAEGVQMMTLHASKG 600 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V ++GM + + P + + +++R L + A+Q L + Sbjct: 601 LEFPYVFIMGMEEEILPHRSSIE-------------ADTVEEERRLAYVGITRARQNLAM 647 Query: 730 SYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 ++ + Q + PS + EL + L A + + R Sbjct: 648 TFAAKRKQYGEIIDCSPSRFLDELPPEDLEWEGLEDAPQEVKAAKGNAALADIRAMLKR 706 >UniRef50_Q4FPM1 DNA helicase II n=5 Tax=Bacteria RepID=Q4FPM1_PELUB Length = 678 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 59/477 (12%), Positives = 145/477 (30%), Gaps = 82/477 (17%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---E 356 + + G + L F V ++ + ++ + +N N+ Sbjct: 253 QSIYSWRGAEIKNFLE----------FDQVYKNSKVIRLEENYRSSQNILSVASNLIANN 302 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + + + + + + E + D + L+ + +I ++V I Sbjct: 303 QNRVGKTLKTTMEEGDLVKLNCFKNGKDEAIGVSDEIEKKLK--KKYSFNNIAILVRAI- 359 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 F F LPY I ++ ++ L L +++ Sbjct: 360 ----FQTREFEERFLKIGLPYRILGGTKFYERAEIKDCVAYLRLIHQPKDDLAFDRIVNN 415 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + I E ++ + ++ + + Sbjct: 416 P----KRAIGESTIKLIHEFSKTNAV---------------------------------- 437 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 + E + + + L+S L ++ WR + ++ + + + +L+ Sbjct: 438 -----SLEIASKKLIEENLIKPKTKIGLSSFLFLMDKWRNDINIKK--INHVKLLQLVLD 490 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 E + + I + L + L + Q + Sbjct: 491 ESGYSSMLKNKKDLENENRLENIKELLSAMK-----DFDNLENFLEHVALATSVDQDWDG 545 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 VN+ T+ + + F VV L G +G++P Q + + +K + G +++R L Sbjct: 546 EKVNMMTMHGSKGLEFDVVFLPGWEEGLFPHQKS------IEEKGQNG----LEEERRLA 595 Query: 717 LEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDE 771 + A++K IS+ + S ++EL + + + D N ++ Sbjct: 596 YVGITRAKKKALISFAMNRFYQGNWIDSMASRFIEELPEKFLEKNSFFDDSKDNEED 652 >UniRef50_D2PY24 ATP-dependent nuclease subunit B-like protein n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PY24_9ACTO Length = 1050 Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 140/1060 (13%), Positives = 275/1060 (25%), Gaps = 160/1060 (15%) Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 F + + V + +A+ ++ +L ++ +L + + L D+ Sbjct: 6 FSVFGDRPKRIGGTVSGTRIETTAYGAAALD-RLHHVVTRLKAGDPMKPVTLLLPDNLTG 64 Query: 122 --RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWK-ALVEYTHQ 178 + ++ A L YL P Q G L + A W+ AL + Sbjct: 65 VVARRHLAATGVAAL---YLATLPRLAEQLAAGLLAPRRPATRPIVAATWRTALSKAPGV 121 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 + H + + E PGL + S L P +Q Sbjct: 122 FDEVAEHPSTIQALAAAHRELRDLSDPGLEK---VAAASGLGPSLIQL------------ 166 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 + C D D L + T + P + L+ Sbjct: 167 -HRHVCDQLQTDWYDETDLLRAATERAT------ADPAAVAELGSLVLYLPQELTQAEAS 219 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 +AS G D L ++D + G+++ Sbjct: 220 FVASLGIAAADV------------------TVIVGLTDVKRADRAVRRSLERIGIDLPPS 261 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 + + EV + +LA LE+ P + V+ A Y Sbjct: 262 ISKNYPVATE-------VLNASDADDEVRCVVRDVLATLEKTPAHR---VAVLYAAATPY 311 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 + + A + R + + +L+L D D+ L Sbjct: 312 ARLLH----EHLAAAKVTVNGPGTRPVHERALARTLLEVLALVDHDLPRADLFRALANAP 367 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 + + +G+ G D D + + Sbjct: 368 TRDFTG-ERIPVPQWERLSRAAGVVRGDDWDVRLARYADTERRTA--------------D 412 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW----LPVCRDM 594 +G + A L + ++L A E L + D+ Sbjct: 413 QERGAEDPRPAVARRAEHNASHALRLHAFAVELRRRLNAAALMESWSELSHVVLRLFHDL 472 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 L + E + A +E + + + G L++LRD L L Q Sbjct: 473 LGDYASLPVEEQYAAVAVEGTLRGLSTL---DELGTPASLTVLRDVLDLELQQSLPRVGT 529 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG-----DRSRR 709 V + L + VV ++G+ + +YP +L + R R Sbjct: 530 FGTGVLVAPLSASIGLSVDVVFVVGLAEDLYPGRLHEDALLPHRVREAAAPELASARDRL 589 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 D + L A + ++ S+ ++ +S R P+ + + + H L Sbjct: 590 DRKQRHLLAAFSAGASRVVASFPRGDLRRSSRRLPTRWLLGTLRELSGDHALAATVWDQA 649 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQ------- 822 + + P Q + ++ A + +A Sbjct: 650 SYDGHLLTSASYSGSLTTAKLPATEQDWQVRAAAAGLTLTDAVVDRARLLLRARAADEFT 709 Query: 823 ------------PLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 P T +L+ + A P F + LQV ++ P Sbjct: 710 RFDGNLSGVDGLPDYATEDRIASPTSLEAYAACPHAYFVERLLQVQPLEAPEDLLVISPV 769 Query: 871 ILEGLSRYQINQQLL----------------NALVEQDDAERLFRRFRAAGDLPYGAFGE 914 + L ++ + + L +RF A G + + Sbjct: 770 QVGNLIHNSLDAFVTRLAGSLPGYGEPWSPEQRSLLLTIGADLAQRFEAEGLTGHPRLWQ 829 Query: 915 IFWETQCQEMQQLADRVIACRQPG----------------QSMEIDLACNGVQITGWLPQ 958 ++ L D R +EI + V + G + Sbjct: 830 RERLRILGDLMVLLDDDDRWRAEHNASVVASELRFGLDGEPPVEIPIPSGRVLLRGSADK 889 Query: 959 VQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALH 1018 V + + + Y A + + + + P+ A A Sbjct: 890 VDLGKDGTIYVTDVKTGGFSR-------YEAIENDP-----VAAGTKLQL-PVYAYAARA 936 Query: 1019 YL--------SQLIEGYREGMSAPLLVLPESGGAWLKTCY 1050 L + + G P+ + PE ++ Sbjct: 937 RLGDESTPVEAAYWFVRKGGRRIPVPLTPEVAERYVHALD 976 >UniRef50_Q0SMP9 Rep helicase, single-stranded DNA-dependent ATPase n=19 Tax=Borrelia burgdorferi group RepID=Q0SMP9_BORAP Length = 659 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 64/507 (12%), Positives = 166/507 (32%), Gaps = 69/507 (13%) Query: 257 LAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSD 316 K R + ++ + L N VG+ + + G Y +L Sbjct: 199 RNKYSKRYKYVLIDEFQDTSLIQYNFIRLLINHSNLCCVGDDDQSIYSWRGASYNNMLQF 258 Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITF 376 + + ++ + +IL++ N + + + + + I F Sbjct: 259 EKDYNAKEIKLEQNYRS-----AKNILDVANSVILNNKNRKEKTLWSSKMCSKV---IDF 310 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 + +E E + +++ + + + I V++ + ++ +F + + Sbjct: 311 FIFEDEIQESEFVASQIIEL-SKLEGFQSKKIGVLMRTNALFKN-VEMIF----KRQGIK 364 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 Y +S + ++ IS L++ + D+L ++++P R I +E L+ +R Sbjct: 365 YKVSGGTSFFQRKEIKDIISYLNVIINPKSDYDLLRIINIP----RRGIGKEYLKKIRDM 420 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 ++ G + A+ + S+ YD+ L Sbjct: 421 ADKKGCC-----------------------------IYDALCDIAFSFASISSYDKV--L 449 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERP-----LEEWLPVCRDMLNAFFLPDAETEAAMTL 611 +++ + + + ++ + ++ ++E + + + + Sbjct: 450 NKQVIESIEDFVSFIEEYQYKFSIKKNTYSNIIKEMIESI-EYWGFLVSENPNSIKVAEY 508 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ-RLDQERISQRFLAGPVNICTLMPMRSI 670 Q + ++ + L L L L +S+ +N+ T+ + + Sbjct: 509 KYQNIEGFLSIIKNWESKQLGELRDLSSFLNYIVLQSNEVSEESENININLMTVHSAKGL 568 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 F V + + D + P +L ++ R +F AL A+ L I+ Sbjct: 569 EFDYVFFIAVEDNIIPHHRIIEDSELDLEEE-----------RRVFYVALTRAKDSLVIT 617 Query: 731 YIGRSIQDNS--ERFPSVLVQELIDYI 755 + +D E+ PS + E+ Sbjct: 618 MANKRKKDRQIFEQLPSRFISEIPKEF 644 >UniRef50_B2KE91 ATP-dependent nuclease subunit B-like protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KE91_ELUMP Length = 994 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 102/679 (15%), Positives = 210/679 (30%), Gaps = 106/679 (15%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 A + E + ++ + + +I E+ +L + E+ Sbjct: 250 EPAPGVLGAAEDALFNHLISGEAENKNIRIISASGVNGELFAAAKTILEL-TENNGYKFS 308 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 +I + ++ Y + +F +P S SHP+ +LL+L + F Sbjct: 309 EIALCARVLEPYKNNLINIFEQ----NKIPLNTSLEFGLLSHPLGIFCFNLLNLAHNGFY 364 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 EDVL+++ A + + + + L G W Sbjct: 365 REDVLSVIKSQYFAVK-----------------------NNWRALAQNSLVERGLEQWEN 401 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 + + Y S L L + P + Sbjct: 402 LINKKDPAYDSS-------------------------FLSFLTNLGTQLGFFNKPYPWDV 436 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 +L F + TE T+ II + ++ +EL + L Sbjct: 437 LSKHAVKILEDFVDANILTEGEKTVFNTIVDTIIQINQFSLVRESAKEKEFLEELNEALK 496 Query: 647 QERISQRFLAG-PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 ++ + + + V +M +R FKVV LLG+N+ V+P+ + + D Sbjct: 497 EQSVGKVQNSELGVTAGDVMGLRGQHFKVVILLGVNEKVFPQIVREDPLLRDKFRRTLRD 556 Query: 706 ---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ------- 749 R ++++ + L SA++KL++S+ RS ++ PS+ + Sbjct: 557 VQGFWIGQKLDRFEEEKLFYYFTLSSAREKLFLSF-QRSDEEGKAVVPSLYLTEVCRAAG 615 Query: 750 -ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT----RMPFDPQNYQPGERQSY-- 802 EL I ++ + K LT + + + SY Sbjct: 616 IELEKNITNISRRELEKYFQTPQEFLNSKEMLTKIFSFPSVEENIKAAGFDWDALASYYN 675 Query: 803 ---AREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRT 859 A + + + + LQ P+R FF L ++ Sbjct: 676 AAKAMSARSSLGAYDGIVNYGDEIFSSLSKKGFSASALQNLAECPMRFFFIKALGLDE-E 734 Query: 860 EDSEIPDTEPFILEGLSRYQINQQL-------------LNALVEQDDAERLFRRFRAAGD 906 D D ++G ++I Q++ L AL + E F R++ G Sbjct: 735 ADILKRDAIASNIKGTIYHKILQRVYTEIDREISMDSALAALEKIMALEMSFERYKEFGL 794 Query: 907 LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEID--------LACNGVQITGWLPQ 958 P ++ E +Q+ + + + + + A +++ G++ + Sbjct: 795 YP--VVWQVITEKMAAALQEFVKKDVESMEGFAPVMFEAAAAAKHDFAGEEIKLHGYIDR 852 Query: 959 VQPDGLLRWRPSLLSVAQG 977 + G +R +Q Sbjct: 853 IDRRGK-EYRIIDYKTSQR 870 Score = 44.8 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 80/232 (34%), Gaps = 25/232 (10%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMF 73 V +P E ++L S+ ++++LQ+ L++ +G ANI F ++ + Sbjct: 11 LEGALKEVVAGIKQNPLEKVLVLTPSSRLSRYLQIFLTENYGSTANISFMKFSALSAKI- 69 Query: 74 VRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF--QLSSKA 131 + + K+ +S + +L++ + ++ ++++ L S Sbjct: 70 -----DAEFTAPNTKKLLS----------AQHLQNFILKNIVGENGLVKRVYISALKSTL 114 Query: 132 ADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQ 191 D+ D +V P L + + + A A +Q Y+ Sbjct: 115 RDMADALIV--PATLKEHAAEGAFGAKEDNEYMSAL---ADTYERYQRALSSVPGMRSYK 169 Query: 192 RFIETLESATTCPPGLP--SRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 + E++ L V G L+ A+ ++ + + F Sbjct: 170 EYFESVVENIPASKFLSSFKAVIFYGFYDFTGTQLEIFNAVRQNYKTIMFFP 221 >UniRef50_UPI0001C3187F UvrD/REP helicase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3187F Length = 746 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 73/534 (13%), Positives = 146/534 (27%), Gaps = 78/534 (14%) Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSD 316 +L RR ++ L + ++ + + LA G + Sbjct: 208 LELFPEVRRRYADNFRHVLVDEYQDTNHVQYRWLQLIAGEHRNLAVVGDDSQSIYGF--R 265 Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLDPLDSS 373 + + F D PD + ++ + + + A A + R + Sbjct: 266 GADIRNILDFEDDFPDAKVVKLEQNYRSTQTILDAANAVIRNNRGQREKELWTDLGIGDP 325 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I E + + ++ D ++ +I V V Sbjct: 326 IKVRELDDEHAEARFVAGEIERIV--DEGVSRNEIAVFYRTNAQ-----SRVLEDTLVRA 378 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 + Y + ++ I+ L++ + + + P R I + L + Sbjct: 379 QIGYQVIGGTKFYERAEIKDAIAYLTMLVNPQDVVSFTRIANSP----RRGIGQTSLSRV 434 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 W N +GI W++ L D Sbjct: 435 ISWANTAGI---------------------------------------TIWEAALEPDSV 455 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 GL + + I A P+ E L +A+ Sbjct: 456 PGLGTAARKSFHRFMGAMRILGERAAANPPVSELLKEVLSESGYLEALEADRTIESQGRI 515 Query: 614 QQWQAIIAEGLGAQY-----GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + + ++ +A L+ ++A D + +R G V + TL + Sbjct: 516 ENLEELVNVAAEYDGSVDLREEAPSLAGFLQQIALVADAD--GRRDDEGLVTLMTLHNAK 573 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + + +V LLG +GV+P Q A L ++ L A + LY Sbjct: 574 GLEYPIVFLLGCEEGVFPHQRAIEEGGLEEERRL-------------AYVGLTRAMRDLY 620 Query: 729 ISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 ++Y S + S V E+ + + P + E L Sbjct: 621 MTYARTRAVFGSRSYGARSRFVDEVPIGLTDRNERPSLGVGSARERATSWSTPL 674 >UniRef50_C3JBX6 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=C3JBX6_9PORP Length = 809 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 71/466 (15%), Positives = 145/466 (31%), Gaps = 67/466 (14%) Query: 293 QDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVA 351 VG+ + + G +L+ F P L ++ + + A+A Sbjct: 249 FAVGDDAQSIYSFRGASMQNILT----------FTHTFPSARLFKLEENYRSSQRIVALA 298 Query: 352 GVNIEEFSRSDNKRPLD--PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 IE K I + S RE + + + + + + Sbjct: 299 NSLIEHNVHRIKKDVFSNRAKGEKIDLYEMESGYREAQHVVESIYKRYCKHSETSYGSFA 358 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 ++ +F +PY I A S ++ ++ L L + +E Sbjct: 359 ILYRTNAQ-----SRLFEDQLRQAGIPYRIYGGIAFYSRAEIKNVLAYLQLIANPHNNEA 413 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 P R I ++ L +R + + + + P T T R LT Sbjct: 414 FERAAKYP----RKGIGDKTLSLIRT--EAADNKTSLFAAAESLIARPDTLSSTARTKLT 467 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 L L D + A+ + ++ + L + +E Sbjct: 468 AYLE--------------LIRDITYNPEAKTLVEWVQSILLRSQILDTLRADTSIEGHTQ 513 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR--LDQ 647 + + +N F E E + +GL + G+ L L Q L Sbjct: 514 L--ENVNEFVSGVQEFEDETSA----------DGLFFERGETTSLHDLLVLFLQGVTLIT 561 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + + A V++ T+ + + F V ++G+ +G++P L+ ++ + Sbjct: 562 DNLETGENADAVHLMTIHAAKGLEFDHVYIVGLEEGLFPSMLSAEEENIEEE-------- 613 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQEL 751 R L A+ A++ IS+ + PS +++L Sbjct: 614 -----RRLLYVAITRAKEYCSISFARYRAINGMTEYMIPSRFLRDL 654 >UniRef50_B7AA42 UvrD/REP helicase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AA42_THEAQ Length = 701 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 64/530 (12%), Positives = 139/530 (26%), Gaps = 92/530 (17%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 D L ++ R R ++ + L + VG+P + D Sbjct: 209 DGEVLKRVRKRARFIHVDEYQDTNPVQYRFTRLLAGEEANLMAVGDPDQGIYSFRAADIR 268 Query: 312 YLLS--DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 +L + D IL N + + RP+ Sbjct: 269 NILDFTQDYPKARVYRLEDNYRST------EAILRFANAVIVKNALRL---EKTLRPVKK 319 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + S + E + + + + + V+ + A Sbjct: 320 GGEPVRLFRAESARDEARFVAEEIARL-----GPPFDRVAVLYRTNAQ-----SRLLEQA 369 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 A R +P + ++ ++ L + + + +L+ P I Sbjct: 370 LASRGIPARVVGGVGFFERAEVKDLLAYARLSLNPLDAVSLKRVLNTPP----RGIGPAT 425 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + ++ E G+ L Sbjct: 426 VEKVQAIARERGLP----------------------------------------LFEALK 445 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + E + +L+ +L L + D E Sbjct: 446 VAALTLPRPEPLRAFLALMEELMDL--AFGPAEAFFRHLLLATDYPAYLKEAYPEDAEDR 503 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + + ++ A+ L D++ L G V + TL + Sbjct: 504 ---LENVEELLRAAKEAE-----SLMDFLDKV--ALTARAEEPAEAEGRVALMTLHNAKG 553 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F VV L+G+ +G+ P + + + +++R LF + AQ++LY+ Sbjct: 554 LEFPVVFLVGVEEGLLPHRSS------------LSTQEGLEEERRLFYVGVTRAQERLYL 601 Query: 730 SYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 SY PS ++E+ + + + + + R Sbjct: 602 SYAQEREIYGRLEPVRPSRFLEEVDEGLYEVYDPYRQSSRKPTPPPHRAL 651 >UniRef50_A6UNC7 UvrD/REP helicase n=1 Tax=Methanococcus vannielii SB RepID=A6UNC7_METVS Length = 1016 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 81/741 (10%), Positives = 208/741 (28%), Gaps = 100/741 (13%) Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITF 376 L + +L+ + L + N + + E + + + Sbjct: 273 LTNINQLEEYYPDLKKIPLEINYRSTENIVNLSQELIKNNEKREKKTVKSNKSSEEKVNV 332 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 E E + + + +++ LTP+DI ++ F + +R +P Sbjct: 333 VSMPDDYSEAEWVSNEVQNLIK--KGLTPKDIFILTRKTAD-----GKKFSDSLKNRLIP 385 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 Q PV++ +S +S F S +D + R + E ++ + + Sbjct: 386 SEYIGNYRLQDFPVIKDTLSYISAISDPFNSG-----IDFKKIFTREGLFEHDIQKINKK 440 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 E P + L + L E + Sbjct: 441 AKEL------------TYSNPEISGDGIFYVLEKNL------------------SELNLE 470 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 E+ + + +L I+++ L+ L D+ + + Sbjct: 471 NLEIAKSIFENINELLIYKKNHLPSDTLKHLLIEKTDIYKLEIHQNTLNSRKNIELLNSL 530 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 +++ E + + +S + L+ + V I T+ + K V Sbjct: 531 ISLVEEFESVRKTEFEEISEYLNILSDF--EVEPEDFLENDTVKIMTIHQSKGKEAKAVF 588 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR-------YLFLEALISAQQKLYI 729 + +++ P Q F + K + D+ + L A+ A+ KLY+ Sbjct: 589 VCDVSERHLPLQYRKKEFTVPLDLQKGIKKDNFDEKKLYLEEELRLLYVAMTRAKDKLYL 648 Query: 730 SYIGRSIQDNSERFPSVLVQEL--IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR- 786 +Y + E PS+ + + + + + E+ + ++ Sbjct: 649 TYPKIFSGNKKESKPSLFLDGISYLQNDKVNFFETEKFEKPVMSVESPINKKISEYERLV 708 Query: 787 -----------------------MPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 N + + + +P S+ + + + P Sbjct: 709 IKYSVQKQYKKAIESIITLVKINELEKSGNLSNFDLNDFLKIDIPDISELSELLTVKLPP 768 Query: 824 LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 L ++++ P+ + L + + G ++I + Sbjct: 769 L-VDKSMKFSASKIKQYIGCPLNFKYNYVLNIPTPKKAHLTV--------GTDVHKIFED 819 Query: 884 LLNALVEQDDAERLFRRFRAAGDLPYGAF-GEIFWETQCQEMQQLADRVIACRQP----- 937 L + + + + + +L +F + +E + + ++ + Sbjct: 820 LGILKNKGEAIDLELAKSMLSENLKEFSFNSKTEFEEEYSKSLKMIEYWFDFESKNKNKI 879 Query: 938 -GQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLE-------HLVYCA 989 + +L G TG + ++ + + + + + A Sbjct: 880 LATEEKFNLDLGGFTFTGIIDRIDVTPDGEYIILDYKTGKKSSVLTKPKMAEDVQMALYA 939 Query: 990 SGGNGESRLFLRKDGEWRFPP 1010 + + K G+ P Sbjct: 940 MAVFEKYGKYPVKMGQLYVNP 960 >UniRef50_A8HYL6 DNA helicase II n=8 Tax=Rhizobiales RepID=A8HYL6_AZOC5 Length = 835 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 62/513 (12%), Positives = 135/513 (26%), Gaps = 86/513 (16%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL---ELENRAVAGVNIE 356 + +G G + +L F P + ++ + + A + Sbjct: 316 QSIYGWRGAEVDNILR----------FESDFPGAKVIRLERNYRSTGHILAAASHLIAFN 365 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 E +T E + D + A+ L I ++V Sbjct: 366 EGRLGKTLFSEGEKGEKVTVTGAWDSGEEARAIGDEIEALQRAGHAL--SQIAILVR--- 420 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + F F L Y + + ++ L S +++V Sbjct: 421 --ASFQMREFEDRFVTLGLNYRVIGGPRFYERAEIRDALAYLRCVISPADDLAFERIVNV 478 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + + + ++ +R +G+ Sbjct: 479 P----KRGVGDAAIKQIRDVARAAGV---------------------------------- 500 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 ++ ES L +L L + WR + + +L+ Sbjct: 501 -----PLMEATRLLTESEELKPKLRSTLRGFVQSFERWREQAENMK----HTELAEVVLD 551 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 + + + + + + + LS + ++ +D + Sbjct: 552 ESGYTEMWQKDRSAEAAGRLENLKELVRSMEGFE--NLSGFLEHISLVMD---VDSGAGD 606 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 V I TL + + F V L G +G++P Q A + ++ K G +++R L Sbjct: 607 DAVQIMTLHSAKGLEFDTVFLPGWEEGLFPHQRA------LDEQGKAG----LEEERRLA 656 Query: 717 LEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYI--GQSHYLPGDEALNCDES 772 + A+ + + + PS + EL D Q Sbjct: 657 YVGITRARASARVYFASNRRIHGMWNSTVPSRFLDELPDTHVDVQESKGGFGWGGTTGGY 716 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 + PF PG +++ Sbjct: 717 GGGNSYGASRFDNPAPFASSYATPGWQRAQNAR 749 >UniRef50_Q30TG3 UvrD/REP helicase n=8 Tax=Epsilonproteobacteria RepID=Q30TG3_SULDN Length = 682 Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats. Identities = 44/437 (10%), Positives = 121/437 (27%), Gaps = 78/437 (17%) Query: 321 QELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLDSS--ITFH 377 + + F + ++ + E VA IE K+ + IT Sbjct: 254 RNIMEFDQDFIGTSVFKLEENYRSREPILKVANALIEHNRSRLGKKLIPTRGGGEDITIL 313 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 E + ++ +L D + DI V+ + + Y Sbjct: 314 NSSDENEEARKIATKVNKLL--DSGVKAEDIAVLYR-----VNVLSRSIEDGLNRAGIAY 366 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 + ++ IS L + + +++ P + + + + + Sbjct: 367 KLVGGLRFYDRAEIKDLISYLRVITNFHDDFSFKRIVNKP----KRGMGKASVDKIELAA 422 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 + + S + + D + + Sbjct: 423 HAN------------------------------------ETSIFEYIEKIAITDLETLVK 446 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM--LNAFFLPDAETEAAMTLIEQQ 615 ++ L + + A + ++ + D L + + + +++ Sbjct: 447 SKNAKTLKKFVKDIRSVAN--AAKESTYNFIDILEDTFHLKDIYKGLPDEVERVLNMDEF 504 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 + + L +EL + +Q+++ + + ++ + + F + Sbjct: 505 YGLFRDFIKN---SPSASLDEFLNELTLQSEQDQV----EGDSIYMMSIHASKGLEFDHI 557 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 ++G+ +G P GD S +++R L + A+ L +S++ Sbjct: 558 FIIGLEEGFLPLV---------------GDGSDLEEERRLGYVSFTRAKDTLTLSHVDSR 602 Query: 736 IQDNS--ERFPSVLVQE 750 + S E Sbjct: 603 FYKGRRSDLQKSRFFNE 619 >UniRef50_D2PLA6 UvrD/REP helicase n=2 Tax=Nocardioidaceae RepID=D2PLA6_9ACTO Length = 1079 Score = 193 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 114/823 (13%), Positives = 222/823 (26%), Gaps = 86/823 (10%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 I+ Y LL + S R + + + VG+P A +G G Sbjct: 277 IERSRYKVVLLDEYQDTSVSQRRMLTALFAGPDPEHGRGHPVTAVGDPCQAIYGWRGASV 336 Query: 311 IYLLSDLESSQELDAFVDVTPD--NLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 L + ++ S IL N + + + P Sbjct: 337 AN-LDEFPEHFRNADGTPARRYVLSVNRRCGSRILAAANEHATELYEQHPGVIPLEAPDG 395 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + +IT + + +E+E + D ++A + P +DI +++ + Sbjct: 396 APEGAITVGLFETRSQEIEWIADSIVAA-HKTPNRRWKDIGILMRTNVDL-----SAVHE 449 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A R +P + + P + ++ L + + +L +L P R+ I Sbjct: 450 ALIARKVPVEVVGLGGLLALPEVVDVVATLQAVNDLTANAAMLRILTGP----RYRIGHR 505 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L L G D +L + L A++ Sbjct: 506 DLALLANRSRALAD--GGDRPAADDLVAALDAAVAGMDSTEVISLAEAVDD--------- 554 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQE--RPLEEWLPVCRDMLNAFFLPDAETE 606 P G E + L +L R + + + + PD Sbjct: 555 PGPAGWGYSPEALERFQELSTELRELRAHAGEPLLDLVRRVISTIGLDVELTATPDHVDS 614 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + A+ G L + ++ A V + T Sbjct: 615 GRRDHLAAFLDAVGNFVSTESDGSLDGLLAYLAAEEEYAAGLDLAVPSEADSVKLLTTHR 674 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPL---------GFDLMSQKPKRGDRSRRD------- 710 + + + VV + + + V+P + L D Sbjct: 675 SKGLEWPVVFVPTLVNKVFPSDRGRDKWTTNAKVLPWPLRGDADTLPDFHDLSNAGLKAF 734 Query: 711 ----------DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 ++R L A A++ L + R PS ++ L + G Sbjct: 735 SDECKQVNSLEERRLGYVAFTRAKEVLIATGHWWGPTQKRPRGPSAYLEMLKKHAGDRVI 794 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF 820 + +E+ + T P+D + Y R+ L ++A +E Sbjct: 795 AWAPQPELSEENPELAEQ--TQAAWPAPYDAEAY----RRRLEGAALVQQARAEGPSAEA 848 Query: 821 VQPLPFTLPETVPL--ETLQRFW--------AHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 + L TV L+R L ++ PD Sbjct: 849 EESLLLDEQATVARWDSELERLLSEARESRSRKAYDVELPRTLSATQVMRLAKDPDGLAT 908 Query: 871 IL-EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE--IFWETQCQEMQQL 927 L + R ++F D GA E + + M Sbjct: 909 ELARPMPRKPNRAARFGTRFHAWVESYFGQQFLLDPDDLPGAADEGIVDDTDLTELMDAF 968 Query: 928 ADRVIACRQPGQ-SMEIDLACNGVQITGWLPQVQP---------DGLLRWRPSLLSVAQG 977 + P + L+ G + G + V ++ W+ S A Sbjct: 969 RVGPYGEKAPYEIEAPFALSIGGRVVRGRIDAVYQVVRPDGSRGYDVVDWKTSRSETADP 1028 Query: 978 MQLWLEHLVYCASGGNGESRL-----FLRKDGEWRFPPLAAEQ 1015 +QL + + + G +++ ++R R L +Q Sbjct: 1029 LQLAIYRVAWAELLGIPLTQVGAAFYYVRTGDIVRPDNLPTKQ 1071 >UniRef50_Q6MFN4 Related to ATP-dependent DNA helicase n=7 Tax=Sordariomycetes RepID=Q6MFN4_NEUCR Length = 1105 Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 69/485 (14%), Positives = 155/485 (31%), Gaps = 66/485 (13%) Query: 295 VGNPLLASWGKLGRD---YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 VG+P + +G + LL D + E+ + IL+L + Sbjct: 252 VGDPDQSIYGWRSAEIKNLWRLLRDYPKTDEISLEENYRSS-------QAILDL-----S 299 Query: 352 GVNIEEFSRSDNKRPLDPLDSSIT--FHVCHSPQREVEVLHDRLLA-MLEEDPTLTPRDI 408 + I++ + K D + E E + + +L LT D+ Sbjct: 300 LLVIQQDKKRYQKVLKPVHDRGSRPVLRKLKNASTEAEWIVAEIRRALLMSGSMLTHNDV 359 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V++ + SA +PY + ++ + L + ++ Sbjct: 360 AVLLRSAS-----LSRHVESALGKAGIPYRMVGGFKFYERSEIKTILDYLRVIHQPDNND 414 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 +++VP + I + ++ L + +S + + V+ T + Sbjct: 415 AFGRIMNVP----KRGIGDGTIKNLIEEAEKSSLS--LYSLLVKHCRGDRTAKTKITKHA 468 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIA-ELVGHLASLLMQLNIWRRGLAQER----- 582 + + G + G + + ES+ +L+ HL + L N + + Sbjct: 469 EQKISGELIRMLNGIRKKMEEAAESNPFGLVDLIEHLLTALNFQNYLQVTYPDDHEQRWA 528 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 ++E++ + D + + + + +EQ + L ++ Sbjct: 529 NVQEFISLANDFVRDLHVSGEDALPEIEGLEQS-------------KEEEVLPQFLANVS 575 Query: 643 QRLDQERISQRFLAGP-VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 D ++ + P V I T+ + + + +V + + +G P + G Sbjct: 576 LASDAQKGEEGQENKPLVTISTIHAAKGLEWPIVFIPAVYNGSIPHMRSEDG-------- 627 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIG-RSIQDNSERFPSVLVQELIDYIGQSHY 760 D++R L A+ AQ LY+SY S + S V + + + Sbjct: 628 --------DEERRLLYVAMTRAQSLLYLSYPVYHSPGSSERTEMSSFVSPVANSFAKKGP 679 Query: 761 LPGDE 765 Sbjct: 680 TFERP 684 >UniRef50_D1R4U3 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4U3_9CHLA Length = 677 Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 68/487 (13%), Positives = 133/487 (27%), Gaps = 89/487 (18%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVD-------VTPDNLLHNIQSDILELEN-RAVA 351 LAS L R Y L + Q + + D ++ + N A Sbjct: 237 LASL--LSRKYQNLCVVGDDDQSIYGWRGAEVKNILDFSDATTIKLEQNYRSTNNILKAA 294 Query: 352 GVNIEEFSRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 I K I S + E E + R+ M E+ L RDI Sbjct: 295 NGVISHNQTRYQKVLWSNRGEGDLIEVFHAPSDKEEAEAVVYRIAHMREKYQ-LKWRDIA 353 Query: 410 VMVADIDSYSPFIQAVFGSAPADR----------YLPYAISDRRARQSHPVLEAFISLLS 459 ++ + +F A + +PY I + + L Sbjct: 354 ILYRS-----NALSRLFELALMNYAWKDGDQWIKGIPYEIFGGTEFYERREVRDLFAYLR 408 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + + E +L +++ P R I E L + Sbjct: 409 VIANPLDQEALLRIINQP----RRGIGEASLDAATAYNRSH------------------- 445 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 W + A++ W + + L + L ++ Sbjct: 446 QLPLWNVLKSLANREPAVQEVSSHW------------SQKALDSLQGFIGILENSKQRFE 493 Query: 580 QERP--LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA------QYGDA 631 Q+ L E + + ++ + Q ++ + ++ Sbjct: 494 QDFSYALTELIEAVN--YKKAINDEVKSAQMRDFKWENVQEFVSSLVEFNESFLKEFNKT 551 Query: 632 VPLSLLRDELAQRLD-QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 L + D + VN+ T + + FK L+G+ D + P + + Sbjct: 552 PTLHDFITSTPLQQDWNQSQKNTQQKDQVNLMTFHSSKGLEFKACFLVGIEDHIIPHEKS 611 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLV 748 + +++R L + A+Q L IS + + E PS + Sbjct: 612 LKEVGV-------------EEERRLMYVGITRARQFLTISMARKRKRMGKEYASKPSRFL 658 Query: 749 QELIDYI 755 E+ + Sbjct: 659 HEIPKEL 665 >UniRef50_A1BEA2 ATP-dependent DNA helicase PcrA n=2 Tax=Chlorobium RepID=A1BEA2_CHLPD Length = 734 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 68/474 (14%), Positives = 142/474 (29%), Gaps = 84/474 (17%) Query: 293 QDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAG 352 VG+ + + G D +L+ F D D L + + A Sbjct: 244 FVVGDDAQSIYSWRGADISNILN----------FQDDYTDALTFKLVENYRSTGTILQAA 293 Query: 353 VNIEEFSRSDNKRPL---DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 ++ + K+ L +T + + E E + + + + + R Sbjct: 294 NSVIRNNLRQIKKELVSHRSAGDPLTLIEARNERHEAEKIGEYI-HSIRIEKGYEFRSFA 352 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 V V +PY I + ++ ++ L + SE Sbjct: 353 VFYRTNAQ-----SRVLEDLMRQNRIPYKIFGSVSFYKRKEIKDAVAYLRFLLNDRDSES 407 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 +L +++ P I E + LR++ GI T +T Sbjct: 408 LLRIINFPP----RKIGETSIGKLREFAEAEGI--------------------TLYEAIT 443 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 R G + LV L L R LA+ + L Sbjct: 444 RADEGQ--------------------FQSRLVNSLKGF-SSLIEALRLLAETGTVYAVLT 482 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV--PLSLLRDELAQRLDQ 647 + + L E A + Q +++ + L + + L Sbjct: 483 ELFSLTSIPLLLKEENTAESLARHENLQELLSMARDFSDNNPDQGSLGDFLETI--SLAS 540 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + V++ T+ + + F VV + G+ + ++P + Sbjct: 541 NYDESQDSDNYVSLMTVHASKGLEFPVVFITGLEERLFPLN--------------CYEPE 586 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSH 759 + +++R LF A+ AQ+K+++S+ + S+ + E+ I ++ Sbjct: 587 QLEEERRLFYVAMTRAQEKIFLSWAQTRYLYGQPQYCLKSMFISEIDSSIVKTE 640 >UniRef50_B4U5U9 UvrD/REP helicase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5U9_HYDS0 Length = 715 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 55/456 (12%), Positives = 141/456 (30%), Gaps = 76/456 (16%) Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 D I + + + + ++ + + ++ +D+L +N + +S K Sbjct: 263 DNIISFIEDYNPEIIKLNINYRSSSEILSLANDVL--KNSKAKWKELVPILKSHKKENQT 320 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 ITFH + ++E E + ++ + ++ +I ++V +I Sbjct: 321 YPKPVITFH--PNEEKEAEWIAKKIEEL---SKSVPLEEIAILVR-----VNYITNFLEQ 370 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A +P+ I ++ ++ L L + S + P + I E+ Sbjct: 371 ALVKAKIPHKIIGALRFFQRKEIKDILAYLHLAINPKDSISFQRAITNP----KRGIGEK 426 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + + + I + L ++ + + R+ Sbjct: 427 TVEKIINLSKQKSI--DLIQATKYVLGNKLFEENDFIKAMERL----------------- 467 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + +G A++R + ++ + + F + E + Sbjct: 468 ----------------------VYNLEKGQAKDRNISFYVEKLINDIRYFEYLEQEYKED 505 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + ++ EL Q + ++ + V I T+ + Sbjct: 506 YQERIDNVKELLRFFEIEAQKHQENQKERLKELLQEISLMEEDEKDNSKAVKIMTVHKAK 565 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F+ V + + +G+ P A M +++R L + A++ L+ Sbjct: 566 GLEFEAVFMPRLENGILPHSSAFSDVLDM------------EEERRLLYVGITRAKKYLF 613 Query: 729 ISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 +SY S + + + + +LP D Sbjct: 614 LSYTAAGKV-------SDFINIMDKTLLDTSFLPKD 642 >UniRef50_B6IP09 UvrD n=8 Tax=cellular organisms RepID=B6IP09_RHOCS Length = 1178 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 62/468 (13%), Positives = 134/468 (28%), Gaps = 84/468 (17%) Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFS 359 + +G G + +L F + ++ + + A I Sbjct: 676 SIYGWRGAEVGNILR----------FDHDFTGARVIRLEQNYRSTAHILGAAHGIIANNQ 725 Query: 360 RSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 K+ +D + + E + D + A+ + L+ + V+V Sbjct: 726 GRLGKQLWTEVDGGEKVRVRGLWDAEEEARWVGDEIEAL--QRKGLSLGQMAVLVR---- 779 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 + F F LPY + + ++ L + +++VP Sbjct: 780 -AGFQTREFEERFITLGLPYRVIGGPRFYERQEIRDALAYLRIVAQPDDDLAFERIINVP 838 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + I + LR L G+ Sbjct: 839 ----KRGIGDATLRQLYVAARTLGV----------------------------------- 859 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 ++ E+ L ++ L +L+ + WR + + P + D Sbjct: 860 ----SLAEATWRLTETDELRGKVRSTLRALMEDIARWRGQIDRT-PHTDLAQAILDESGY 914 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 + + + + +I + L+ + +A +D S Sbjct: 915 TRMWQQDKSPEAPGRLENLKELINAMGEFE-----NLTGFLEHVALVMDNAEASGLE--- 966 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V++ TL + + F VV L G +G++P Q + +++R L Sbjct: 967 QVSLMTLHGAKGLEFDVVFLPGWEEGLFPSQRTLD----------ENGIAGLEEERRLAY 1016 Query: 718 EALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPG 763 + + ++++S+ S PS V EL + PG Sbjct: 1017 VGITRGRIRVHVSHAANRRIHGSWATSLPSRFVDELPAEHVEVENAPG 1064 >UniRef50_Q7NB99 UvrD n=1 Tax=Mycoplasma gallisepticum RepID=Q7NB99_MYCGA Length = 753 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 68/509 (13%), Positives = 153/509 (30%), Gaps = 72/509 (14%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSEN-AGQLFNSDGEQDVGNPLLASWGKLGRD 309 + DP L K R ++ + + ++ VG+P + +G G + Sbjct: 218 LNDPIILKKWQNRYEAILVDEFQDANEIQYKIVKLLREKNNNFLFVGDPDQSIYGWRGAN 277 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLH--NIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 S++ S D F D+ L + IL L N A+ N F + Sbjct: 278 -----SEIGDSIRFD-FNDLVVKYLTQNYRSKQSILNLANDAIKMNNSRYFKSLLSHDLT 331 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 D I + + + + D++ ++ T D ++ F Sbjct: 332 DLGPKPIWI-NFSNIEYQNRFVMDKIKELVAS-KQYTYGDFAILYRT-----NFSSVSLE 384 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + +PY I ++ I L L D+ +++ P R I + Sbjct: 385 RLIKENRIPYEIFGGYKFFLRKEIKDLIGYLKLVDTNND-IAFDRIINTP----RRMIGD 439 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + +++ N+ I + E Sbjct: 440 TSIEIIKELANKKSI-------------------------------------TEYEALDY 462 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 L + + + ++ L + + + + E + +L + Sbjct: 463 LDESNIKANVKKSAQNFKKMIEDLRANQGNWSVYQTINEIIKRIN---YYDYLNEPTKHD 519 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 ++ E +G + ++ LA D + + + T+ Sbjct: 520 SVNEFIDFLNKYEKEYEN-DFGTKLTINDFIQNLALEGDLDNNQPNHNKNALKLMTIHSA 578 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + FK V ++ MN+ + P + + ++++ ++R + A A+ L Sbjct: 579 KGLEFKNVFVINMNENILPSSRSIAATN---------NKAKLAEERRIVYVAYTRAKHNL 629 Query: 728 YI-SYIGRSIQDNSERFPSVLVQELIDYI 755 ++ S + PS + EL D + Sbjct: 630 WLCSNQDYDARTKEPYQPSRFLYELSDLV 658 >UniRef50_C9M511 ATP-dependent DNA helicase PcrA n=2 Tax=Synergistaceae RepID=C9M511_9BACT Length = 673 Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats. Identities = 58/491 (11%), Positives = 130/491 (26%), Gaps = 82/491 (16%) Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 VG+P + +G G D + ++ + E LL + A + Sbjct: 262 LTAVGDPDQSIYGWRGAD-MSMIMNFERD------FPGASVMLLEQNYRSTGGILEAANS 314 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 ++ R N + C + E E++ + L D+ ++ Sbjct: 315 LISHNFDRREKNLWTDREQGAKPQVWNCPTSDDEAELITTEIERFLSS--GYRASDVAIL 372 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 + + LPY + + + +S L L + + + Sbjct: 373 YR-----MNALSRRIEESLLSHNLPYQVVRGQGFFDRREVRDVLSYLRLALNPYDRASLD 427 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 + ++P + L L ++ Sbjct: 428 RVGNLP----TRGLGPRSLDKLDAYLLSHR------------------------------ 453 Query: 532 LLGYAMESAQGEWQSVLPY-DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 W +V E SG A LA + ++ L + + Sbjct: 454 -----TADPADVWAAVAQTGAELSGQGAAGARQLAGAMGEILGCGGDLKRALDVILMRIG 508 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 +L I++ + LAQ Sbjct: 509 YETVLQKIDPAG------WEDRYDNVMEILSLAGDGDSLP--------ELLAQAALYTDA 554 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 + +N+ TL + + F +V ++G+ +G++P + D + + Sbjct: 555 DRDSGGQGINLSTLHGAKGLEFPLVFMIGLEEGIFPHSRSSD------------DPAEIE 602 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALN 768 ++R L + AQ++L ++ + S + PS + E+ + Sbjct: 603 EERRLCYVGMTRAQERLILTRVRERRLFGSTTTQRPSRFLAEIAPDLRDEFDFGEVRPSV 662 Query: 769 CDESEARVKAH 779 + Sbjct: 663 GYRFNRPSRRW 673 >UniRef50_Q3A0S9 ATP-dependent DNA helicase PcrA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0S9_PELCD Length = 737 Score = 191 bits (486), Expect = 9e-47, Method: Composition-based stats. Identities = 70/519 (13%), Positives = 138/519 (26%), Gaps = 77/519 (14%) Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG---EQDVGNPLLASWGKLGRDYIYLLS 315 + R+R E + A +D VG+ + + G + +L+ Sbjct: 203 RDAYRRRFAHLLVDEFQDTNQVQYAMVKALADDGRHLCVVGDDDQSIYAWRGAEIGNILN 262 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILE---LENRAVAGVNIEEFSRSDNKRPLDPLDS 372 F P + ++ + A V + +P Sbjct: 263 ----------FERDFPGASVIRLEQHYRSSATILEAAGEVVACNIGRKGKTLWTDNPAGE 312 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 +T E + + + D RD+ V V Sbjct: 313 PLTLEPLPDDLEEARFVAAEIARL--RDAGRHLRDVAVFYRTNAQ-----SRVLEETLVR 365 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 LPY + + ++ ++ L + S +++VP I Sbjct: 366 EGLPYVMVGGVKFYARMEIKDVLAYLRALANPADSLSARRIVNVP----SRGIGAVTTGR 421 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 + + E+G + L M + Q E Sbjct: 422 IAEHEEEAGGFLAACRLCLERGVLKGAAAKKVAAFSAFMERFAQRMTEVPFPQLTADLLE 481 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 SG L A Sbjct: 482 ESGYAPNLRE---------------------------------EAQSAMTEGERKEAKGR 508 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 + + ++A Q ++ L +++A D + R V + TL + + F Sbjct: 509 LENLEQLLAGMEEHQATES-SLQEYLEQVALVTDLDSYDTRL--DRVTLMTLHAAKGLEF 565 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 VV + GM +G++P A G+R +++R L + A QKLY+++ Sbjct: 566 PVVFMTGMEEGIFPHGRA------------AGERDDVEEERRLCYVGMTRAMQKLYLTHA 613 Query: 733 GRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNC 769 R ++ PS + E+ ++ P + Sbjct: 614 RRRRIYGDYQYNAPSRFLAEIPPHLMGDKPAPALQKPAT 652 >UniRef50_C8V6U5 DNA helicase and DNA-dependent ATPase (Eurofung) n=3 Tax=Trichocomaceae RepID=C8V6U5_EMENI Length = 997 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 76/533 (14%), Positives = 153/533 (28%), Gaps = 65/533 (12%) Query: 295 VGNPLLASWGKLGRDYIYL--LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAG 352 VG+P + +G + L + L + E+ D + IL+ + Sbjct: 246 VGDPDQSIYGFRSAEIENLKRMQRLYRNTEVVLLEDNYRSS------GSILKSAQDVIEQ 299 Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA-MLEEDPTLTPRDIIVM 411 + L S + E + L + ++ L D ++ Sbjct: 300 DLSRPAKKLQPTHTFGTLP---VLRKLPSAEDEAQWLVLEIKRCIVLTGKLLKYSDFAIL 356 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 + + SA +PY + + ++ + L + SE +L Sbjct: 357 LRSAS-----LSRQIESAMGKHGVPYRMVGGQRFFDRVEVKLLLDYLRVISHPENSEALL 411 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT--WRFGLT 529 +++VP I EE ++ L ++G +V + + GL+ Sbjct: 412 RIINVP----SRKIGEETVKMLLNGAEKAGKPLWDYIKDVAQGRRSTEKAMSKPTNQGLS 467 Query: 530 RM--LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 + L+ Y+ E + P ++ L + E Sbjct: 468 SLVGLIEYSREKLRQCVDRSAPRRLLEIVMKRL--SFREFITATYGSND--------ENR 517 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 ++++ A E+ + I + LS +A + Sbjct: 518 WANVEELMSQADDATAADESEQD---ENLPEIAGLTQQESHPGEEALSRFLANVALSTEV 574 Query: 648 ERISQRFLAGP----VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 + + V I T+ + + + VV + +G+ P A Sbjct: 575 QPKEETEGEDQAQEKVTISTIHAAKGLEWPVVFIPAAYEGIIPHSRAEDS---------- 624 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV-QELIDYIGQSHYLP 762 D++R L A+ AQ LY+SY R ++N+E + + QELI Sbjct: 625 ------DEERRLLYVAMTRAQALLYLSYPLRQARENAETNVTSFLPQELI------TSRL 672 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 DE A + Y +W ++ Sbjct: 673 RPVGPKLDEKVVYGIADILRRERPSAVAMLEGLDSLPSVYDDQWTEDGRESPG 725 >UniRef50_C6HUX3 Putative ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUX3_9BACT Length = 796 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 84/704 (11%), Positives = 177/704 (25%), Gaps = 110/704 (15%) Query: 151 TGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSR 210 G + Q L + ++ + + + ++ + + T P L R Sbjct: 115 AGLPPDFTVSDAGDQKALVREIMRRHKVSEEDVAPQ-EILRQISQWKNARQTPGPELARR 173 Query: 211 VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFE 270 + G + Y ++ L R Sbjct: 174 L--FG---------------SRR-----FMATCYEEYEEGLRKNRSLDYDDLLCRLVGLL 211 Query: 271 DRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKL-GRDYIYLLSDLESSQELDAFV-- 327 + + D QD NPL +L R+ + + Q + F Sbjct: 212 SSQPDVATALRQEFHHILVDEYQDT-NPLQEELIRLLSRERRNVTVVGDDDQSIYRFRGA 270 Query: 328 ------------DVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSIT 375 LL + + A + + + + S + Sbjct: 271 EVAHIQRFSDHYPGAGRVLLSRNYRSTSAIVDSATSVIRKNDGRYMKTVTAVRGGGSPVL 330 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 + E + L + P V+ P A A + Sbjct: 331 LMEFPDEEAEARGVAGILREWIA--GGGRPSRAAVLFRTNAQSLPL-----EKAMAAAGV 383 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 P+ ++ L L + F + + +VP +E + L Sbjct: 384 PFFRPGGGGLLESREARDLVAYLRLLVNPFDRLSLARIFNVPP----RGQGDEAVEELSA 439 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + +L G Sbjct: 440 LSEAH---------------------------------------PELPVAELLERLAERG 460 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP-DAETEAAMTLIEQ 614 E +G L++LL + + L + + D ET + Sbjct: 461 GRREPLGKLSALLREGSEAASRGDVPLSLLDRVVAATGYREWLTREKDEETRRRRLETLE 520 Query: 615 QWQAII-AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 +++ + + PL+ ++L + V + T+ + + F Sbjct: 521 EFRGLAGDFVREEDREASGPLAAFLEDLTLSREG---PDAEGRERVGLMTIHQSKGLEFD 577 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 V + G+ D + P + G + +++R LF A+ A+++L++++ Sbjct: 578 CVVVAGLEDQLLPFRSFAGGRSS----------TDIEEERRLFYVAMTRARERLHLTWAR 627 Query: 734 RSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 + PS ++++ + A + S R+ F P Sbjct: 628 TRRIYGKTQSFGPSPFLRDIPGELSAGDRPVFVRAPSAPSSSGRLPGQ--SRDGGSGFSP 685 Query: 792 QNYQPGERQSYARE--WLPAASQAGKAHSEFVQPLPFTLPETVP 833 P R A P A K +P P P ++ Sbjct: 686 SFGHPSRRDRLASPSVGRPVFRGASKVERRQGEPSPAEGPASIS 729 >UniRef50_D0RN21 ATP-dependent DNA helicase PcrA n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN21_9RICK Length = 742 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 57/479 (11%), Positives = 135/479 (28%), Gaps = 90/479 (18%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEF 358 + + G + +L F + + ++ + EN A I Sbjct: 251 QSIYSWRGAEVKNILE----------FKNNYQNTQTIKLEQNYRSTENILNSATSLISNN 300 Query: 359 SRSDNKRPLDP--LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 K + E + D + L +I ++V Sbjct: 301 EDRLEKNIWSELGDGEKVKIKSYFDGISEATGVSDIIEQNLS--KKFKLNEISILVR--- 355 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + F F LPY I ++ + L L + +++ Sbjct: 356 --AAFQTREFEERFIKIGLPYRIIGGLKFYERSEIKDALGYLRLINQSSDDISFERIINN 413 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + I + ++ + + E Sbjct: 414 P----KRSIGDSSIKKIHDFARE------------------------------------- 432 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 + + + + L + + +L S L+ + W++ + V + Sbjct: 433 --KDLSLFDASKEILKENILKPKTIQNLKSFLVNMISWKQKCKDIDHISLLEIVLDESGY 490 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 + L + E + + + + L+ + ++ Q I + + Sbjct: 491 SSMLKN-ERTPEADARLENLKELKSSMKNYS-----SLNEFLENISL---QTAIDEEWDG 541 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 +NI T+ + + F V L G +G++P Q + ++G +++R L Sbjct: 542 EKINIMTIHSAKGLEFDAVFLPGWEEGLFPHQKSID---------EKGA-DGIEEERRLA 591 Query: 717 LEALISAQQKLYISYIGRSIQDNSER--------FPSVLVQELIDYIGQSHYLPGDEAL 767 A+ A+++L+IS+ + + S + E+ D + E Sbjct: 592 YVAITRAKKELFISFANQRKFYGRQNDNYDFYSSLQSRFIDEIDDKYTKISIDDSTEDE 650 >UniRef50_D0L0Z4 UvrD/REP helicase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0Z4_HALNC Length = 688 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 68/556 (12%), Positives = 164/556 (29%), Gaps = 59/556 (10%) Query: 228 QALGKHIEIHLLFTNPCRYYWGD--IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQ 285 +AL + + C D I P L + R L + ++ Sbjct: 172 RALAGLFDQYQRQLTACNALDFDDLIGRPVELLQSDAAVRERWQARVRYLLVDEYQDTNT 231 Query: 286 LFNSDGEQDVGNPLLASWGKLGRDYIYLLS-DLESSQELDAFVDVTPDNLLHNIQSDILE 344 VG + + +G D+ + + + L+ D P+ ++ + Sbjct: 232 TQYELVRLLVGK--IGALTAVGDDHQSIYAWRGAKPENLNRLADDFPNLHRIKLEQNYRS 289 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPL---DSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 + + A ++ + + L V + + E E + +L Sbjct: 290 VNSVLKAANHLIALDTTTASKQLWSDIGMGEPHRVIVAATAEDEAERIATEILHRHFRAQ 349 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 T RD V+ + A +PY+++ ++ ++ +S L L Sbjct: 350 T-EYRDFAVLFR-----GNHQARLIEQALRKLNIPYSLTGGQSFFERAEIKDAMSYLKLL 403 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 + L +++ P R +I + L + E R R + + + Sbjct: 404 VNPDDDAAFLRVVNTP----RREIGPTTIEKLGGFARE---RRSSLFAAARSIGIQSVFD 456 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 + L R + + +++ + + R + Sbjct: 457 NRAADRLNRFC---------DWLDGIRA--QPDRDAIDVIQQVFDAIDYPAYLREQESTP 505 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + + + L+ + AE G + + L L + Sbjct: 506 KAADRRWQNVEEWLDWLAKISD-------------TQVEAESEGGESATKMDLPALAQRM 552 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 ++ ++ + V + TL + + F V + GM + + P + Sbjct: 553 TLLGILDQQTREKDSNAVALLTLHAAKGLEFGHVFMAGMEEDILPHRDCIE--------- 603 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQSH 759 D +R ++R L + A+ L + R + + PS + ++ + Q Sbjct: 604 ---DEARLAEERRLCFVGITRARLSLTFTLTKRRRRYGEWKDTEPSRFLDDIPADLLQWQ 660 Query: 760 YLPGDEALNCDESEAR 775 ++ +++ R Sbjct: 661 GEGIEQPKEVSQAQGR 676 >UniRef50_A0LDC5 ATP-dependent DNA helicase, Rep family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDC5_MAGSM Length = 673 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 86/609 (14%), Positives = 179/609 (29%), Gaps = 97/609 (15%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGI--SA 218 + Q L+K L E + I + P L R + Sbjct: 118 DSSDQERLFKRLCEELGFADAYWTPK--RLTHTIGRWKDDGIRPQDLTDREIRKAWERAR 175 Query: 219 LPPVYLQALQALGKHIEIHLL-FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLF 277 + +Y + QAL + + C W ++PA LA R R ++ + Sbjct: 176 IQQMYERYQQALLQSNAMDFGDLLLHCLQLWQ--QEPAILAAFQQRFRYLLVDEYQDTNH 233 Query: 278 RDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 L VG+ + + G +L F + P + Sbjct: 234 VQYRWICALSGLHQNLCVVGDDDQSIYSWRGARIENILK----------FEEDFPQTKII 283 Query: 337 NIQSDIL---ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL 393 ++ + + A +N + D +I F+ + + E + + Sbjct: 284 RLEQNYRSSGNILKAASGLINHNKGRMEKQLWTEDAQGDAIHFYQAENDEDEARFVASEI 343 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 L + + ++V +PY + + Sbjct: 344 LTLCPAGD---YQQAAILVRTARQTRSL-----EEGLMRAGIPYQVVGGLRFLDRAEVRD 395 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 ++ L + S ++++P + I L+ LR+ ++ Sbjct: 396 ALAYLRVVASNRDDVAFERVINLP----KRGIGPGALQSLREIASQ-------------- 437 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 + ES+ + LA+ + + Sbjct: 438 -------------------------ERCSLLHAARFAVESNTMKGAAAKGLAAFIQLIEH 472 Query: 574 WRRGLAQERPLEEWLPVCRDM--LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 R LA + E L + + + + +++ A+ Sbjct: 473 ARSMLADDITPAEMLTKLLALSGYRDYVRDLEKGNDRIDNLDELRNALAR---------T 523 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 L L +E+A D + +A V I TL + + F V L+G+ + V P + Sbjct: 524 ESLQLFLEEVALATDLQDGG--PVANRVVISTLHAAKGLEFPWVFLVGVEEDVMPHK--- 578 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP--SVLVQ 749 ++++P+ G +++R L + A+Q+LY++ R N P S ++ Sbjct: 579 ---LALTEQPEIG----LEEERRLAYVGMTRAKQRLYLTMARRRWLFNKPVMPIKSRFLK 631 Query: 750 ELIDYIGQS 758 EL I + Sbjct: 632 ELPQEILED 640 >UniRef50_A5HZM6 ATP-dependent DNA helicase n=4 Tax=Clostridiales RepID=A5HZM6_CLOBH Length = 884 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 73/710 (10%), Positives = 199/710 (28%), Gaps = 104/710 (14%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIY 312 P K + ++ + + L VG+P + G + Sbjct: 211 PKVRKKWQQKLEYIMVDEFQDVNIKQYRLVSILSEYHKNLFVVGDPDQTVYSWRGANVNL 270 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR-AVAGVNIEEFSRSDNKRPLDPLD 371 +L+ F + + N + I + + +K + Sbjct: 271 ILN----------FDKEFKGTKTIMMNQNYRSSSNIIKASNSLISKNKQRIDKELIPIKH 320 Query: 372 SSITFHVCHSP--QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 +I HS +E + +++ +++ + ++I ++ + ++ A Sbjct: 321 GNIPVVYKHSENIYKEANWIINQIEQIIK--GGNSYKNIAILYR-----AHYVSRSIEEA 373 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY + ++ +S L + + +++ P + + ++ Sbjct: 374 LLKNKIPYTLYSGVEFYQRKEIKDILSYLRMVVFE-DDLSFIRIINEP----KRNFGKKR 428 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + +R++ ++ + S+ Sbjct: 429 MEIIRKYAEDNNC---------------------------------------SLYSSLKI 449 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 E + L+ + + + L E L A E E + Sbjct: 450 NLEDKLIAKSKADKFVDLIERYKKIYKEMRITDLLMELLNN--SGYEAMLRESGEDER-L 506 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + + +I A + D L + + +N+ TL + Sbjct: 507 ENLAELKNSISDYENSAGEDTTLE-----DYLQEISLFTNSDLKENKDTINMMTLHTAKG 561 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V + N+G++P + + + +++R L A+ L++ Sbjct: 562 LEFPYVFICEFNEGIFPSA-------------RTNTKEKMEEERRLAYVGYTRAKNALFL 608 Query: 730 SYIGRSIQDNSERFPSVLVQ-----------ELIDYIGQSHYLPGDEALNCDESEARVKA 778 S D S RFPS + EL + + ++ N +K Sbjct: 609 SDAEGVNYDGSYRFPSRFIFNTGKTYLNYLVELKESLIDDANEFISDSENSMNKSNNIKF 668 Query: 779 HL--TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLET 836 + +H + + SY ++ A + +T L+ Sbjct: 669 KIGERIIHKLLGLGVIIGIDNDNSSYMIKFDNA-----ETFRNISFSTQLDKADTNNLDI 723 Query: 837 LQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER 896 ++ + RL+ + ++ + + R + + ++ Sbjct: 724 IKSNERKAIDHLEAERLEAERKEQERLEAERLEAERKEQERLEAERLEAERKEQERLEAE 783 Query: 897 LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLA 946 R + E + Q + + + ++ ++ +I+++ Sbjct: 784 RLEAERKEQERLEAERLEAERKEQERLEAERLEAERKEQERLEAEQIEVS 833 >UniRef50_A5VHK1 ATP-dependent helicase/deoxyribonuclease subunit B n=10 Tax=Lactobacillus RepID=ADDB_LACRD Length = 1260 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 147/1033 (14%), Positives = 294/1033 (28%), Gaps = 189/1033 (18%) Query: 12 VLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLS---QKFGIAANIDF------ 62 VL + V+ DD F LV + + L+ + G++ + F Sbjct: 18 VLIDQLVDQVKNTPADDTF---YYLVPNHIKFETEINVLAGLRDRQGLSGSDRFASSRVQ 74 Query: 63 -PLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 + W + + P F KQ +S M +L + +E + LR Y ++ Sbjct: 75 VLSFSRLAWYLLR----DTPA---FQKQHLSKIGMAMLTSQVVQEQASDLRLYASEVKQP 127 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLW---KALVEYTHQ 178 + +++++ +L + D QAW A ++ Y + Sbjct: 128 GFIQKMTAQLEEL-KNANITADDLTDIIYRVKSANDPAANQAWLAKMYDVETIYHAYEAR 186 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 L + LY++ + L+ + FI + Q + AL Sbjct: 187 LRDRYIGNSELYRQLVSYLQKSPEVAKM---HFFIDRFAQFTANEQQVVDAL-------- 235 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 I + A LT R + ++ P +N ++ Sbjct: 236 ------------ITNAASTTISLTLDRGYPDQNHPNPQELPPKNNLFYSSAMQFHR---- 279 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 L +G++ + +++ Q + D L + S + + EE Sbjct: 280 -LWKFGQMHQ------KEVKVLQNVAFATTPRVDAELQQVDSYFKRYASEPIGPGEREEL 332 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 +I F + E+ + ++ ++ RD +++ +D Y Sbjct: 333 LD----------PQNIQFMTTTNRMTELNNVATQIRQLVASGK-YRYRDFLILSRHLDGY 381 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 I+ VF +P R +HP++ +LL LP + + D++ LL + Sbjct: 382 QTMIEPVFA----AHNIPVFNDHERLMDNHPLVTLLTTLLELPQRGYRTADIIQLLKTWL 437 Query: 479 LAARFDITE--------EGLRYLRQWVNESGIR----WGIDDDNVRELELPATGQHTWRF 526 L R + + W + I W +D + A G + Sbjct: 438 LVPRTGTGDLMGLSDFQAAVFTTENWCLKQAIEGKNAWTTNDPEKIKQLWQAPGTNLTDP 497 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 + L + V + + L L + + L Sbjct: 498 KYEQSRLEKLNDQLALVKDFVANHLLPVFDQFKQAQTGQELATALYQFLAAMGVTDRLYA 557 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP------LSLLRDE 640 W D + + + I+ E + + L+ + Sbjct: 558 WQQYQST-------RDLDLARQPQQVWTTFCQILQEYVEILGQQELRDGTNEVLADFSEL 610 Query: 641 LAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 L + SQ V + ++S KVV ++G D V P Sbjct: 611 LQAGFAAAQYSQIPATLDQVVVSETGIVQSENRKVVFMIGSTDDVMPEMQESDSLLTDQD 670 Query: 700 KPKR-------------GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 K + D+ ++ ++A+++L S +S D+ E S Sbjct: 671 KDILSAYLDEDFQYLPGTAIDQLIDEPFVHYTGFMNAKEQLIFSAP-QSDSDDKELSISP 729 Query: 747 LVQELIDYIGQSHYL--------PGDEALNCDESEARVKAHLTCLHT-----------RM 787 + ++ Y GQ D A++ + L + R Sbjct: 730 YMHDMARYFGQPVREYPLATSKAGQDNAIDFVSAPLATINRLVEVSRQIRDEQGVGIDRQ 789 Query: 788 PFDPQNYQ--PGERQSYAREWLPAASQAGKAH-----------------SEFVQPLPFTL 828 P P +Q A++W +A +A + L L Sbjct: 790 PVMPVGWQTVAESLVKLAKQWQQSADAKVQAEGISLGQRLSLVAAGFHYQNKIDSLGNKL 849 Query: 829 PETV----------------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL 872 + + + LQ F+ + F + L++ R E + D Sbjct: 850 AQALYLRAAPDDERGRVLYASISQLQDFYINQYEYFLKYGLRLQKRDELTLSNDRI---- 905 Query: 873 EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI 932 + + V L +F ++ + + QL D + Sbjct: 906 -----GTFFHKAMETFVTTIRENNL-------------SFADLAHKDNQMQRDQLIDHAL 947 Query: 933 ACRQPGQSMEIDL 945 Q Q + L Sbjct: 948 VTAQENQPTLLRL 960 >UniRef50_A0LFK0 ATP-dependent DNA helicase, Rep family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFK0_SYNFM Length = 620 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 59/498 (11%), Positives = 140/498 (28%), Gaps = 72/498 (14%) Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLL 314 L + R+ + L + +++ ++ N + + + L G + Sbjct: 190 RDLLQKYPEIRKAYRNRFDYILVDEFQDSNEIQNQIIDLLLKDGRLTVVGDDYQSIYQF- 248 Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI-EEFSRSDNKRPLDPLDSS 373 + F + ++ + A + + K+ D Sbjct: 249 -RGANPFHFINFPQKYAKARVFRLEENFRSTRQIVTASDRLIAHNLQRIEKQCFSRRDGQ 307 Query: 374 -ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 +T ++ Q E E + DR +L D + R+I ++ + P F A Sbjct: 308 PVTVETFYNEQMEAEWVADRCRELL-NDENIPYREIAILYRTKFTSLP-----FERALRS 361 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY + + ++ + L + +++VP R I L+ Sbjct: 362 AGVPYTMVGAQGFFQRREVQDINAYLICAVNPSDDISFERIVNVP----RRGIGPGALKK 417 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 + + + R + + G + Sbjct: 418 IFGCKERNM---------------------SLRDAARKAIDGRLIPK------------- 443 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 A + L SLL + + + D + + T + Sbjct: 444 ---KAAAELDKLLSLLESIAE-----EKPDAAMHRVMKETDYFAHLSTLSDDGDDLETRL 495 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 E I + + L ++ + V + T+ + + F Sbjct: 496 ENIKSMIYDAA------GKASIPEYLE--DAALIRDDQDETDNGNGVRLSTIHAAKGLEF 547 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 K V ++ + +G+ P + + + + + +++R L A+ A + L +S Sbjct: 548 KAVFVVAVEEGILPHRKS------IETESEIELERGMEEERRLMYVAMTRASELLSLSAA 601 Query: 733 GRSIQDNSERFPSVLVQE 750 PS + E Sbjct: 602 ATR--RGELARPSPFLAE 617 >UniRef50_A2QP78 Contig An07c0280, complete genome n=8 Tax=Trichocomaceae RepID=A2QP78_ASPNC Length = 1003 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 71/552 (12%), Positives = 150/552 (27%), Gaps = 64/552 (11%) Query: 295 VGNPLLASWGKLGRDYIYL--LSDLESSQELDAFVDVTPDN--LLHNIQSDILELENRAV 350 VG+P + +G + L + L + D + +L + Q I + +R Sbjct: 243 VGDPDQSIYGFRSAEIKNLGRMQQLYKDTSIVLLEDNYRSSGCILSSAQDVIEQDSSRPA 302 Query: 351 AGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE-EDPTLTPRDII 409 + + + + E + + + + D Sbjct: 303 KKLQPTHSLGTMP-----------VLRKLPNSESEALWIVLEIKRCIALTGKLVNYSDFA 351 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 +++ + + +PY + ++ + L + ++ Sbjct: 352 ILLRSAA-----LSRQIEAQMGKHGIPYRMVGGLRFFDRVEIKLLLDYLRVISQPGNTDA 406 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 +L +++VP + +E + L + ++ + L R Sbjct: 407 LLRIINVP----SRKLGDESVNLLTKGAEKA----------KKPLWDFIKDVAQGRSSTE 452 Query: 530 RMLLGYAMESAQGEWQSVLPYDES--SGLIAELVGHLASLL---MQLNIWRRGLAQERPL 584 + L A + + L L + + + L Sbjct: 453 KSLSKPADNGLCTLVGLIESARQKLCECTDGSSPRKLLDFLIKKLSFREYLKALHGSNEE 512 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 W V + A P E EA + Q + + + Sbjct: 513 NRWANVEELLTQADDTPGPENEAENDENLPEIQGLEQQQAHPGEEALSRFLANVALSTEV 572 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 L QE V I T+ + + + VV + + +G+ P A Sbjct: 573 LPQEGEEGEQSDEKVTISTIHAAKGLEWPVVFVPAVLNGIIPHSRAEDS----------- 621 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV------QELIDYIGQS 758 D++R L A+ AQ LY+SY R +D E S + + + Sbjct: 622 -----DEERRLLYVAMTRAQALLYLSYPLRQSRDGEEATLSSFLPSKLVEERFRFLGPKI 676 Query: 759 HYLPGDEALNCDESEARVKAHLTCLHTR--MPFDPQNYQPGERQSYAREWLPAASQAGKA 816 + E + A ++ + +P+D Q + G A G Sbjct: 677 NDKIIQEIADILRRPMPGSAAISEGRSTCDIPYDDQWTEDGFEAPDAIIRWDGTRAMGGE 736 Query: 817 HSEFVQPLPFTL 828 + Q L Sbjct: 737 PNPKRQRLNQEQ 748 >UniRef50_B1AJE0 ATP-dependent DNA helicase PcrA n=15 Tax=Ureaplasma RepID=B1AJE0_UREP2 Length = 743 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 61/524 (11%), Positives = 161/524 (30%), Gaps = 88/524 (16%) Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN------PLL 300 Y Y+ H + +N D QD LL Sbjct: 184 YCDRCFKLNYVDFDDLINLTHKLFIEFPEVLEKWQNKFDYILVDEFQDTNKIQYDLISLL 243 Query: 301 A----SWGKLGRDYIYLLSDLESSQE--LDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 A + +G D ++ +++ ++ F + + ++++ + Sbjct: 244 ATKHQNLFVVG-DPDQMIYSFRGAEQWIINNFSQNFKNTKVTILKTNYRSTQPILNTANR 302 Query: 355 I---EEFSRSDNKRPLDPLDSSITFH-VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV 410 + + N + D+++ + +P E + ++ +L + I V Sbjct: 303 LIDANNNNYKKNLTAFNTNDNNLPIYLRGQNPIDEANWIARKIRELL--EEGTPANQIAV 360 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 + + +PY I + ++ I+ L + + Sbjct: 361 LFRS-----NHYSRTIEQSMMRESIPYTILGSKKFYERAEIKDMIAYLKVV-NDLDELSF 414 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 L +++ P R I +++ + Sbjct: 415 LRIINTP----RRAIGPTTFEHVKHY---------------------------------- 436 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 A+ + ++++ +++ + ++ + + + R + ++ + E L + Sbjct: 437 -----AINNNLFLFEALAEVEKNHLINNTQKKNILNFVNLIKEIRDEM-EDLKIHEILEL 490 Query: 591 CRD--MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 A+ L + + E + + + + + + D + D L Sbjct: 491 IYKKVNYEAYLLENEKAEDKIDNVYE-LKRAMKMYVDRHPDDTIN-----DYLNSIALYL 544 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 + V + T+ + + ++ V + GMN+G+ P A ++ P +G Sbjct: 545 NKDGKDSKENVLLMTVHNSKGLEYENVFVAGMNEGLLPSDRA------INDDPIKG---- 594 Query: 709 RDDDRYLFLEALISAQQKLYISYI-GRSIQDNSERFPSVLVQEL 751 +++R + AL A++ LYIS + F S + E+ Sbjct: 595 VEEERRIAYVALTRAKKNLYISSACCYDPLARRQVFESRFINEI 638 >UniRef50_C1SJ11 DNA/RNA helicase, superfamily I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ11_9BACT Length = 703 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 52/457 (11%), Positives = 124/457 (27%), Gaps = 85/457 (18%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEF 358 + +G G D +L F + + + + A I Sbjct: 247 QSIYGWRGADIRNILE----------FDTIFKGTKIIRLLENYRSRPQILQAANKLIRNN 296 Query: 359 SRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 K + D + E E + D++ L + + +I ++ Sbjct: 297 KLRKGKDLVAARDEGGLVQVLPVSRETDEAEFVIDQVNKYL--EEGVKGSEIAILYRTNG 354 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 F + + Y + ++ +S L L D+ + S + Sbjct: 355 QSRN-----FEVLLNRQGVAYKVIGSVGFYQRREIKDILSYLRLFDNPYDSVSFRRSVKA 409 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P I + + + + + +GI + YA Sbjct: 410 PP----RGIGDTTINKITDYASGNGISI--------------------------LEAVYA 439 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 M + G E + +L + + + + + Sbjct: 440 MND------------QLRGAQKESFRGYLKIFNELAACLKVSEMVKTVMDMTDY-SGYVK 486 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 + E E + + + + ++ + + S Sbjct: 487 RY-----EDEQEAERRISNIEELYNAAVSFENSNS---DAMITDFLAATAIATSSDEPAD 538 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 V + T+ + + F+ V L G+ +G++P + D + ++ R L Sbjct: 539 SCVQLMTIHSAKGLEFESVFLTGLENGLFPLHGSLEEPDELEEE------------RRLC 586 Query: 717 LEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQEL 751 + A+Q L+++Y + + SV + E+ Sbjct: 587 YVGVTRAKQNLHMTYASTRMVYGKYMPQSRSVFLDEM 623 >UniRef50_C7XXL1 ATP-dependent nuclease subunit B n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XXL1_9LACO Length = 1253 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 131/1124 (11%), Positives = 287/1124 (25%), Gaps = 182/1124 (16%) Query: 9 RLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQW----LQM--TLSQKFGIAA--NI 60 L + + D F LV + L L + A + Sbjct: 16 HQHALVQELHQQLVAHPNDQFF----FLVPNHIKFSTEIDVLNQLKNLGDSTDVYAQSRV 71 Query: 61 DFPLPASFIWDMFVRVLPEI-PKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 W + P+ S + K++ LP+ L + Sbjct: 72 QVLSFTRLAWFLLRNDPHYQTPRISDVGLTMLVAKIIRELPEDD-----------LKMFA 120 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 + + + V+ Sbjct: 121 KEAHRYGFVQDLT----------AQLIE--LQNANVDPQD-------------------- 148 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL-GKHIEIHL 238 + IE ++ S F+ ++ L VY + L G+ + Sbjct: 149 ----------HDAIIERVQKWADEHQERVSSAFLDKMTVLFKVYAAFEEGLTGRLNSCAV 198 Query: 239 LFTNPCRYYWGD-IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 R + D +L + + + E + + + L + Sbjct: 199 YQLLIKRLFKDDFSHTHFFLNRYNGQFSAMEEQIVETMIKKAASTTIGLVLDRPYRGATL 258 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 P + + L++ F + PD +L + Q + + + V Sbjct: 259 PNPNNLFYQSGMQYHRLAE---------FAEQQPDVMLVDDQVVTVNRVSDGLVEVEEWM 309 Query: 358 FSRSDNKRPL--DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 +++ P D + F + E++ + ++ ++ RD +++ + Sbjct: 310 KAQAQFTIPEQQPRTDQGVHFFTAPTRVAELQRVAAKIRQLVASGQ-YRYRDFLILTRHL 368 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 D Y+ ++ VF +P + R+ +HP++ ++ + D F DVL LL Sbjct: 369 DGYTTMLKPVF----DANEVPIFNDNDRSMANHPLVTLLEAIFKIADHYFQLPDVLQLLK 424 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 ++ + + Y Q + + Q W F Sbjct: 425 TGLVVPQERDEKGRSYYSSQRFMSAVYTTENWCLKYGKTGHAWLEQAEWEFTPHVDPQIL 484 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE------WLP 589 A + + + + + + + LA + QL G + L + Sbjct: 485 ANNEQLKKREQ-QQTSQINWVKSVVRNQLAPFIKQLQGASDGQTAAQILYQGLINLGVRE 543 Query: 590 VCRDMLNAFFLPDA-ETEAAMTLIEQQWQAIIAEGLGAQYGD-AVPLSLLRDELAQRLDQ 647 A + + ++ E + + L+ + + Sbjct: 544 QLEQWAKAATKRGQMDLAQQPQQVWNTMVNLLDEYVTVLGNEGTFYLTAFAEVIQVGFQT 603 Query: 648 ERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD- 705 SQ V + +++ KVV ++G D V P G K Sbjct: 604 ATYSQIPSTMDQVLVSETGIVQTNQRKVVFMIGATDDVMPEIKISEGLLSDPDKQLLSQG 663 Query: 706 -----------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 R D++ L +++A+++LY+S + S + L Y Sbjct: 664 LTDGQFLPVSGMQRIDNEAMLNYLGMLNAREQLYLSAPVMGSNEERVTM-SPYLVGLATY 722 Query: 755 IGQSH----YLPGDEALNCDESEARVKAHLTCLHTRMPF------DPQNYQPGERQSYAR 804 GQ L D + K + Q G+ S Sbjct: 723 FGQWDADNNQLRNDLPFAPEPRADFAKLEPFVSAPAATLTNYVQVERQAKNAGQTVSAGW 782 Query: 805 E------------WLPAASQAGKAHSEFVQPLPFTLPETV-------------------- 832 WL ++ ++ + L + Sbjct: 783 RNISREMNHERLGWLKSSLNYQNQTTKLSPEMAAQLYGHLDPDVLKQATAAGDNFDWTTV 842 Query: 833 -----------PLETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIPDTEPFILEGLSRYQI 880 + LQ F+ +P F + L + R E ++ F + L + Sbjct: 843 SDDQRHNTLATSISQLQTFYRNPYEYFLKFGLDLQKREELEITNANSGTFYHDSLEAFVR 902 Query: 881 NQQLLNALVEQDDAERLFRRFRAAGDLPY----------------GAFGEIFWETQCQEM 924 + + + ++L A D + +T Sbjct: 903 LLKQNQVKLAELADDQLAFYVAKAMDWAFSRQPSVVELAANYERIAYQKHHLEQTVLTMA 962 Query: 925 QQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 + L ++ + E G+ + L + + + Sbjct: 963 RVLRNQAQYSASHPVTTEQKFGHVGL-LDDRHDSQPSYRALIYETKIRNQKSSQPDLKRK 1021 Query: 985 LVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYR 1028 + G + +R D + + + A L++ Y Sbjct: 1022 VYL---RGRIDRVDAVRGDQQDYLTVVDYKSANKEF-DLVDAYE 1061 >UniRef50_D1YBS2 UvrD/REP helicase n=2 Tax=Propionibacterium acnes RepID=D1YBS2_PROAC Length = 1071 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 116/855 (13%), Positives = 215/855 (25%), Gaps = 120/855 (14%) Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 +HL+ +P G+ Y LL + S ++ S V Sbjct: 251 LHLVTHHPRV---GEELRARYRVVLLDEYQDTSSAQADVLAALFSGPDSAHGMGHPVMAV 307 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD-----ILELENRAV 350 G+PL A + G +L + TP +L + I+ N A Sbjct: 308 GDPLQAIYEWRGAAASNIL----EFHRRFPNKEGTPAQVLSLATNRRCADQIINAANVAS 363 Query: 351 AGVNIEEFSRSDNKRPLDPLD------------------SSITFHVCHSPQREVEVLHDR 392 + S +++ D +T +E + D Sbjct: 364 EELRQTLSSAAESDDHDPAGDRAEVAVGQPLIAPEGNRRGEVTVAAYPDWVKECQACADI 423 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 L+ E D ++V + + R +P ++ P + Sbjct: 424 LVEAKERGTIARWSDAAILVRRNSDVADLYDS-----LTARDVPVRFANLSGLLRLPDIA 478 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 ++ L L R + LL P R ++ + L + + DD Sbjct: 479 MVVAHLRLLVDRQDDAAMATLLAAP----RLGLSTDDLAMVYRRARALAKARAKDDG--- 531 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 S + G L + + ++ Sbjct: 532 -----------------------LDPDDVEIHLSDAVMEGRPGGHERLQCAVKRVCAEIV 568 Query: 573 IW-RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 L + +++ D AA I E + Sbjct: 569 EVDAHQGDSPDDLVLRIEAITGLIDDIAADDPHRSAARRDHLDALWNAIREVRRSDPTMT 628 Query: 632 VP-LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 + + D + V + T+ + + + +V + M GV+P Sbjct: 629 ITGIVTWLAAEEDVGDGLPRAATDDRDAVTVSTVHGAKGLEWPLVIIPDMAQGVFPSTST 688 Query: 691 PLGFDLMSQKPKRGDRSRRDD--------------------------DRYLFLEALISAQ 724 P F + R D + L AL A+ Sbjct: 689 PDNFASEAAVLPSFARGDASDISHPLSGSVVDTKAYVAALKEDSQWAEARLAYVALTRAK 748 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 ++L +S+ + P L D +G G+ N ++ H Sbjct: 749 ERLVVSWHQWRPRRKGSLGPGRYADLLADMLGTVWPDFGERPDNVIQAGTPWPVFADVGH 808 Query: 785 TRM-PFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAH 843 + PG+ W A + A LP + + R A+ Sbjct: 809 GLIDNASRSVDDPGQADRVRAWWTDADALLKDARRHIDLQDEVALPPRLTTSQIVRLHAN 868 Query: 844 PVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNA----LVEQDDAERLFR 899 P + + R D + ++Q+L A L + ++ L Sbjct: 869 PQAF------RDDLRRPMPRPADRGA-GIGTAFHEWVSQRLAPAEPIPLFDAEEVAELDE 921 Query: 900 RFRAAGDLPYGAFGEIFWETQCQEMQQLAD-RVIACRQPGQSMEIDLACNGVQITGWLPQ 958 + G Q + R + + G L Sbjct: 922 ENTTQEAVAAEPSGA-ESRALRSLCQAFEESRWAGATVLAVEKSFVMTIGQTVVRGRLDA 980 Query: 959 VQPDGL-------LRWRPSLLSVAQGMQLWLEHLVYCASGGNGESR-----LFLRKDGEW 1006 V D + W+ S A +QL + L + + G SR + + Sbjct: 981 VVADPDHPGDELVIDWKTSPPRSADPLQLSIYRLAWAQARGIDPSRVRAVFHHVGANETI 1040 Query: 1007 RFPP-LAAEQALHYL 1020 P L A+Q L Sbjct: 1041 SAEPLLDADQVAAIL 1055 >UniRef50_B3QF13 UvrD/REP helicase n=9 Tax=Rhizobiales RepID=B3QF13_RHOPT Length = 848 Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 54/483 (11%), Positives = 138/483 (28%), Gaps = 84/483 (17%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL---ELENRAVAGVNIE 356 + +G G + +L F P + ++ + + A + Sbjct: 329 QSIYGWRGAEVDNILR----------FDHDFPGAKVIRLERNYRSTGHILAAASHLIAHN 378 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 E R D +T + E + + + + + L +I ++V Sbjct: 379 EGRLGKTLRTEDVDGEMVTVTGAWDSEEEARAIGEEIEQLQRQGHAL--NEIAILVR--- 433 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + F F LPY + + ++ L + +S +++V Sbjct: 434 --ASFQMREFEDRFVTLGLPYRVIGGPRFYERAEIRDALAYLRVINSPADDLAFERIVNV 491 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + + + ++ L + I Sbjct: 492 P----KRGLGDATVQMLHDHARKRRI---------------------------------- 513 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 +++ ++ L + L L+ W +R + +L+ Sbjct: 514 -----PLFEAARMVIDTDELKPKARSSLRGLIENFERW----QVQRDALAHTELAEIVLD 564 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 + + + + + + L + ++ +D+E + Sbjct: 565 ESGYTEMWQKDRSADAAGRLENLKELVRSM--EEFENLQGFLEHISLVMDREGGADE--- 619 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 V++ TL + + F+ V L G +G++P Q A + ++ + G +++R L Sbjct: 620 DAVSVMTLHSAKGLEFETVFLPGWEEGLFPHQRA------LDEQGRAG----LEEERRLA 669 Query: 717 LEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 + A+++ + + + PS + EL + G Sbjct: 670 HVGITRARKRAKLYFATNRRIHGTWNTTIPSRFLDELPAANVEITESKGGSGWGGMSGYG 729 Query: 775 RVK 777 + Sbjct: 730 PSR 732 >UniRef50_A0PR94 ATP-dependent DNA helicase n=12 Tax=Mycobacterium RepID=A0PR94_MYCUA Length = 1101 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 116/838 (13%), Positives = 213/838 (25%), Gaps = 149/838 (17%) Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS--DILE 344 + VG+P+ + +G G L + L L + ++ L Sbjct: 299 DDGLALTAVGDPIQSIYGWRGASATN-LPRFSTDFALSDGAPAPVLELRTSWRNPPRALH 357 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED--PT 402 L N A + + D ++ + Q E + + D+L + Sbjct: 358 LANAISAEPRRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADG 417 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 ++P V+V +P A R +P + S P + +++L L Sbjct: 418 VSPPTAAVLVRRNADAAPI-----ADALVARGIPVEVVGLAGLLSIPEVADLVAMLRLVG 472 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + +L P R+ + + L + + A G Sbjct: 473 DPTAGAAAMRVLTGP----RWRLGGSDVAALWRRAVALVGGPQVGASVSPGAVAAAAGPD 528 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 T L P D S E +G LA+ L L Sbjct: 529 TDTACL------------ADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHW-LPD 575 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG-------AQYGDAVPLS 635 + E V + A A + ++A+ + + Sbjct: 576 LVAEVRRVLGLDCDVRAAATASGAWAGAEHLDAFADVVADYAERTAISAGSALSTKASVD 635 Query: 636 LLRDELAQRLDQERI----SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 L L + E V + T+ + + ++VV + ++ GV+P + Sbjct: 636 GLLAYLDVAAEVENGLPPAQLTVARDGVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASR 695 Query: 692 LGF--------------------------------------DLMSQKPKRGDRSRRDDDR 713 + D +S ++ D+ R D++R Sbjct: 696 SSWLTDPGELPPLLRGDRASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEER 755 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG--------DE 765 L + A+ + +S R PS + EL D I +S D Sbjct: 756 RLLYVGVTRAEDTVLVSGHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDR 815 Query: 766 ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE-------------------- 805 A E + + + P + E Sbjct: 816 APVAGERNPLLDDVVEAVWPTDPLATRRGDVERGARLVAEAISADAGVEAPAGGAAVADI 875 Query: 806 --WLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE 863 W + V P LP + + L PV + RL T Sbjct: 876 EGWTADVDALLAERARAVGPPTRALPNQLSVSGLVELARDPVG--ARQRLVHRLPTRPDP 933 Query: 864 IPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQE 923 I + GDLP A ++ Q ++ Sbjct: 934 HA----------QLGNIFHTWVQQFYGA-------ELLFDLGDLPGAADSDV---GQVED 973 Query: 924 MQQLADR-----VIACRQPGQSMEIDLACNGVQITGWLPQVQPD---GLLRWRPSLLSVA 975 + L + A + ++ + G + V D G Sbjct: 974 LAPLQEAFAGSPWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDGGATVVDWKTGEPP 1033 Query: 976 QGMQLW--------LEHLVYCASGGNGESR-----LFLRKDGEWRFPPLAAEQALHYL 1020 +G + + + + A G ES ++R L AL L Sbjct: 1034 RGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPDELPDGMALAEL 1091 >UniRef50_B2GL30 UvrD/Rep helicase family protein n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GL30_KOCRD Length = 1145 Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 110/863 (12%), Positives = 211/863 (24%), Gaps = 172/863 (19%) Query: 295 VGNPLLASWGKLGRDYIYLLS--DLESSQELDAFVDVTPDNLLHNIQSD---ILELENRA 349 VG+P + +G G L S + + D + + L + +L++ N Sbjct: 316 VGDPQQSIYGFRGASSGQLFSFVENFPRRTADGGSEYAATSFLTTAWRNSLSVLDVANAV 375 Query: 350 VAG----VNIEEFSRSDNKRPLDPLDSSIT----FHVCHSPQREVEVLHDRLLAMLEEDP 401 A + + PLDP ++ + E + Sbjct: 376 AAPLRTAPAWSRSAATVEVPPLDPAPGAVRGRVRVSRYATDTEEARATAQLIHEQRAAHE 435 Query: 402 TLTPRDI---IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 ++ V+ + P +PY + P + +++L Sbjct: 436 GQPLAEMPTMAVLCRRRAQFEPL-----RLELEALDIPYEVVGLGGLLHTPEVSDVVAML 490 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + S+ + LL AR+ + L L W E R ++ Sbjct: 491 HVLTDPGRSDALARLLA----GARWRLGARDLAALGDWAAELERRHESAARGEQDTRPDD 546 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 G +E+ + + + E + L +L + R L Sbjct: 547 VVMADAVDG------SSLVEALETLPRDGWVSSRGRSISPEGMRRLRALREDVVALREVL 600 Query: 579 AQERP--LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV-PLS 635 E + E V + LP + A A + + ++ Sbjct: 601 GDELTTVIHEVEAVLGLDIELAALPGEDPATARRN----LDAFTDQAVQFSATTRTHDVA 656 Query: 636 LLRDELAQRLDQERISQRFLA----GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 L +E A V + T+ + + + V + G+N G +P + Sbjct: 657 AFLAWLETASREENGLDLPPAHTRHDAVQLLTVHASKGLEWDHVHVPGLNQGDFPSTNSS 716 Query: 692 ---------------LGFDLMSQKPKRGDRSRRD----------------DDRYLFLEAL 720 L P+ D + ++R L A Sbjct: 717 AWTGEAAKLPWPLRGDASQLPEWSPRVDDVRELEASFGEFAEDVAEHDLGEERRLAYVAF 776 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 A+ L +S + S ++E D + Sbjct: 777 TRAKTLLELSGSVYRGTGKKPKEVSPFLREARDMAESATPGFEAGPWADPGELEGNPQLD 836 Query: 781 TCLHTRMPFDP------------------------------------------------- 791 T + P+DP Sbjct: 837 TRVSALWPYDPLEGPVITRTSRDADGTLSETVLPPAHEGRRARAEAAAQAVRNGGFPHLA 896 Query: 792 ----QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRA 847 + GE + R W A S+ +P +P V L + P Sbjct: 897 DVPDEELAAGEAGARVRRWRHEAELLLARRSDPERPRTVHMPSHVSASALVSMDSDP-EG 955 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDL 907 F + R S + Sbjct: 956 FVSTLRRPMPRRPGSAARA-----------GTAFHTWVENFYGDSAL-----------LD 993 Query: 908 PYGAFGEIFWETQCQEMQQLADRVIACRQPGQ-----SMEIDLACNGVQITGWLPQV--- 959 P G + ++ +LA+ A + + ++ + + G + V Sbjct: 994 PDELPGADDHVDEDLDLPRLAETFRASPWAERQPYAVELPVETPVGSLTVRGRIDAVFRT 1053 Query: 960 -QPDGLLRWRPSLLS-----VAQGMQLWLEHLVYCASGGNGESRL-----FLRKDGEWRF 1008 L+ W+ + + QL L L + G + ++ D R Sbjct: 1054 ADGWELVDWKTGRVPHGEDLRRKSGQLALYRLAFARLHGIPLESVSAAFYYVASDRVVRP 1113 Query: 1009 PPLAAEQALHYLSQLI-EGYREG 1030 LA EQ L ++ Y G Sbjct: 1114 LDLADEQ---QLEGIVSSLYARG 1133 >UniRef50_A6CDV2 ATP-dependent deoxyribonuclease subunit B n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CDV2_9PLAN Length = 1125 Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats. Identities = 83/616 (13%), Positives = 186/616 (30%), Gaps = 85/616 (13%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 + E + P I + E+EVL + +L + + P Sbjct: 277 APASSRSQICEALFDNPRGIKPSPSAEQIKVLAVAGQRNELEVLAVEIKQLLLQ--GVPP 334 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 +I ++ Y I + +PY + + PV+ A + L + + Sbjct: 335 EEISLVFRSTLEYGDLIH----ETLSAAGIPYFLGQEQEFSRFPVIRAIFTFLQIELDNW 390 Query: 466 VSEDVLALLDVPVLAARFD--ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 + ++++LD + + + +R L + + E I G Sbjct: 391 SFDSLMSILDSNYFSPDWPEYKSGTAVRCLSRILRELKIDSGK----------------- 433 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 L + Y + P ++ L E L +L+ + L + Sbjct: 434 -TDILNALEKEYRKANELCTRYPDQPKRQAILLEMESA---YHLAKRLSSETQKLRGKEL 489 Query: 584 LEEWLPVCRDMLNAFFLP---------DAETEAAMTLIEQQWQAIIAEGLGA-------- 626 W+ + + N F LP + L+ +++Q ++ + Sbjct: 490 FVTWIEILISLANEFGLPKAWSSEEPGTEALDQRDQLVWERFQKLLFHAVAEVDQIEQFH 549 Query: 627 -QYGDAVPLSLLRDELAQRLDQERIS-QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 + + L R L L+Q+ ++ Q G V + +R++ + + G+++ Sbjct: 550 QREAAPLDLLTFRSLLLDLLEQQTLALQTEETGRVQVLDASQLRNLSVPYLLVGGLSEAS 609 Query: 685 YPRQLAPLGFDLMSQKPKRGD--------RSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 +PR + + + +++ ++ LF E + ++L +SY S Sbjct: 610 FPRSHREDCLYSEKDRGELNEYGLSLKRHANQQQEEMLLFYEVMTRFSKRLILSYPAIS- 668 Query: 737 QDNSERFPSVLVQELIDYIGQ-----------SHYLPGDEALNCDESEARVKAHLTCLHT 785 F S + L+D + ++A++ + L Sbjct: 669 STGQPLFASPYLTALMDLFEPGALSVRQVGELNPLPRREQAMSARDLRILAIDELKRDQP 728 Query: 786 ---RMPFDPQNYQPGERQSYAREWLPAASQAGK-----------AHSEFVQPLPFTLPET 831 + +Q R + + A + A + F Sbjct: 729 GLFLQILEEPGFQATARNILSAVEMAVARFEQEGFTEYEGIMVSAATRQAIHERFPQDYE 788 Query: 832 VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ 891 L+ + A P + F Q L + F+ G+ + I +L L + Sbjct: 789 FSTTQLELYLACPFQFFVQNVLGIEVPEPPEL---RTNFLQRGIHVHSILTRLYEQLGSE 845 Query: 892 DDAERLFRRFRAAGDL 907 D +L+ + Sbjct: 846 GDNTQLYEADQVEPLF 861 >UniRef50_A0QK57 Superfamily protein I DNA and RNA helicases n=3 Tax=Mycobacterium avium RepID=A0QK57_MYCA1 Length = 1096 Score = 189 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 108/827 (13%), Positives = 209/827 (25%), Gaps = 127/827 (15%) Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS-DILEL 345 + VG+P+ + +G G L D + L + Sbjct: 304 DDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPRSDGTPAPVLELRTSWRNPPRTLRV 363 Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA--MLEEDPTL 403 N A + D ++ + E E + D + A + Sbjct: 364 ANAISAEARRRSVAVHALCPRPDAPPGTVRCALLPDMVAEREWIADHIDAHYRRARADGV 423 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 +P V+V +P A R +P + S P + +++L L Sbjct: 424 SPPTAAVLVRRNADAAPI-----ADALRARGIPVEVVGLAGLLSVPEVAELVAMLRLVAD 478 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 + +L P R+ + L L Q G E A Sbjct: 479 PTAGAAAMRVLTGP----RWRLGARDLAALWQRARALGGAGTAGGPATAEAIASAADPRN 534 Query: 524 WRFGLTRMLLGYAMESAQGEWQSV------LPYDESSGLIAELVGHLASLLMQLNIWRRG 577 + A + + E S L A L L L+ ++ Sbjct: 535 VEADAVCLADAIADPGPAEGYSAAGYARIAALAAELSALRAHLDHPLGDLVAEVRRVMDL 594 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 + R + L+AF A A + + Sbjct: 595 DCEVRAAAAAGWAGTEHLDAFADVVAGYAERAD------TGGTDASASASVAGLLAFLDV 648 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 + + L ++ V + T+ + + +++V + ++ GV+P A + Sbjct: 649 AESVENGLPAAPLAV--ARDRVQVLTVHSAKGLEWQLVAVAHLSGGVFPSTTAKTTWLTD 706 Query: 698 S--------------------------------------QKPKRGDRSRRDDDRYLFLEA 719 + + ++ ++ R D++R L A Sbjct: 707 AAELPPLLRGDRARPGALGIPVLDTSDVTNRKQLSDKISEHRRQLEQRRVDEERRLLYVA 766 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG------QSHYLPGDEALNCDESE 773 + A+ L +S + R PS + E+ D I A + E Sbjct: 767 VTRAEDTLLVSGHHWAATGIKPRGPSDFLCEIKDVIDASAAAGDPCGTVEQWAPAPADGE 826 Query: 774 ARVKAHLTCLH--TRMPFDPQNYQPGERQSYAREWLPAASQAGKA--------------- 816 P + + + R+ + A A Sbjct: 827 RNPLRDNAVEAVWPADPLASRRGEVERGAALVRQAMAAEPGDPGADVEGWAADVDALLVE 886 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS 876 + P P LP + + +L P R RL+ + Sbjct: 887 RARVTGPPPQVLPGQLSVSSLVGLARDPAR--AAQRLRHRLPSRPEPHA----------L 934 Query: 877 RYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ--LADRVIAC 934 + GDLP A ++ + E+Q L A Sbjct: 935 LGNAFHAWVQKFYGA-------ECLFELGDLPGAADSDVGDTAELAELQAAFLESPWAAR 987 Query: 935 RQPGQSMEIDLACNGVQITGWLPQVQPDGL-----LRWRPSLLSVAQ------GMQLWLE 983 + ++ + G + V + + W+ + +QL + Sbjct: 988 TPVAVEVPFEMPIGDTLVRGRIDAVFAESDGGATVVDWKTGAPPDSPEAMRQAAVQLAVY 1047 Query: 984 HLVYCASGGNGESR-----LFLRKDGEWRFPPLAAEQALHYLSQLIE 1025 L + A ES ++R L L+ L+ Sbjct: 1048 RLAWAALAKVPESSVRTAFHYVRARTTVVPEALPTSD---QLAGLLA 1091 >UniRef50_Q027B8 ATP-dependent nuclease subunit B-like protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027B8_SOLUE Length = 897 Score = 189 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 96/700 (13%), Positives = 192/700 (27%), Gaps = 134/700 (19%) Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 + S+ + +++ +REVE + R+L + R+I Sbjct: 219 ATLARLGALDFSEEQVRGTRTRNALALIKAPGIEREVEEIARRILRQV---EGRPFREIG 275 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 V+V + Y+P ++A +P + HPV+ + + Sbjct: 276 VIVRAPEIYAPILRAT----LDRFGIPARFYFDEKLERHPVIRFLAGAMDAMLGGWEHGA 331 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 LA+L + A F + + V E R G+ Sbjct: 332 TLAVLRLAPRFADFGV----MDRFDFDVRERIPRSGLG---------------------- 365 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 + + G L + L A E +W Sbjct: 366 ---------------ELRSLLIDEDGQPRPYAERLLHKIDSLAALEEWRALELAPRDWAA 410 Query: 590 VCRDMLNAFFLPDAETE---------AAMTLIEQQWQAIIAEGLGAQYG-DAVPLSLLRD 639 + F E + + + + E A +G +PL Sbjct: 411 RFATLREIFKPARPADEITHELALQYRSQAAVLDLFDEALDEAAQALHGIRHLPLEDYWR 470 Query: 640 ELAQRLDQERISQRF-LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 + L + + V++ + R VV + GM + +P+ F + Sbjct: 471 AVKSILRLKPLRLEDGRRNVVHVMSAHEARQWVLPVVFVCGMVEKQFPKFHQQDPFFGDA 530 Query: 699 QKPKRG--------DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 + + ++R LF A+ A +SY + PS+ +++ Sbjct: 531 ARCRLNGSGIRVRTAAEFEREERMLFDAAITRATMLATLSYPEFDGR-GERNLPSIYLED 589 Query: 751 LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 L LP ++A+ A Sbjct: 590 L--------DLPAEDAVAVRP-------------------------------APRARTGD 610 Query: 811 SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 S + + + + L+ F P + F Q L++ PD Sbjct: 611 SAPVEIRNAQLLEYMRHRTAQLSPTALETFLQCPFQYFTQRFLRLK------TAPDRPEQ 664 Query: 871 ILEGLSRYQINQQLL-NALVEQDDAERLFRRFRAAGD----LPYGAFGEIFWETQCQEMQ 925 L+ L++ + +L +E D LF R AA +P G E +++ Sbjct: 665 RLDFLTQGNVVHAVLAEWWLEPQDLAALFERVFAAQLKEKCIPPGYHTERLRNAMLDDLR 724 Query: 926 QLADR--VIACRQPGQ-SMEIDLACNG-VQITGWLPQVQ-----PDGLLRWRPS------ 970 + Q + + V+I G + ++ ++ ++ S Sbjct: 725 RFTSEDPWPKIAFRSQIETKFCFPLDDTVEINGRIDRLDTAPDGRTFVIDYKYSAAQRVK 784 Query: 971 -LLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFP 1009 L A +Q L L + ++ G + Sbjct: 785 DKLKDASLLQAPLYMLAAQHLNLDAAGMYYVGVKGGIEYA 824 >UniRef50_D2R6Z4 UvrD/REP helicase n=4 Tax=Planctomycetaceae RepID=D2R6Z4_9PLAN Length = 669 Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 72/533 (13%), Positives = 158/533 (29%), Gaps = 86/533 (16%) Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD---VGNPLLASWGKLGRDYIYLLS 315 + ++ E + +D ++ VG+ + +G G + ++L Sbjct: 203 RQQEARQFDHLLVDEYQDTNGLQYRIIRALADEHRNICVVGDDDQSIYGWRGAEVKHILQ 262 Query: 316 DLESSQELDAFVDVTPDNLLHNIQ------SDILELENRAVAGVNIEEFSRSDNKRPLDP 369 F + PD + ++ S ILE N+ +A R Sbjct: 263 ----------FKNDWPDAKVVRLEWNYRSTSAILETANKLIAYNKHRHDKVLKAARAGGE 312 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 S E + + L +D T PRD ++ + + Sbjct: 313 RP---RIEQYPSEVEEARQVVADIAFRL-KDGTRDPRDFAILFRTNEQ-----PRAIETE 363 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 LPY + ++ + ++ L +S +L +++ P I E Sbjct: 364 LRKAKLPYVMLGSQSFFDRKEVRDLLAYLRAIESPRDEVSMLRIINTPP----RGIGERS 419 Query: 490 LRY-LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + L + V W + + L + T Sbjct: 420 VETVLSEAVRSGKTVWDVVSNLSEGPTLFGDAEKT------------------------- 454 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC------RDMLNAFFLPD 602 + L + V + S + + A+ L E + + Sbjct: 455 -----TTLSDKNVAAIRSFSNLIQRYSEATARGDSLAELTRKLISETGYEQEVRRIYPDP 509 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ--ERISQRFLAGPVN 660 E + + +E+ ++ + +S D++ + + ++ + Sbjct: 510 EEQQMRLAAVEEVVNSV---AAYEAEEEKPSISGYLDQVTLGQREMGDDKEKQLARNAIA 566 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + TL + + F V ++G+ DG+ P + K + + D++R L + Sbjct: 567 LMTLHASKGLEFPHVYMIGLEDGILPHSRSV----------KADSQDQIDEERRLCYVGI 616 Query: 721 ISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDE 771 AQ++L +S ++ R PS + E+I H G + Sbjct: 617 TRAQERLTLSLALTRMKWGKPRDTTPSRFLFEIIGQADNPHSRGGTRPRSSSR 669 >UniRef50_C2ME74 ATP-dependent DNA helicase PcrA n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2ME74_9PORP Length = 778 Score = 188 bits (478), Expect = 9e-46, Method: Composition-based stats. Identities = 68/572 (11%), Positives = 144/572 (25%), Gaps = 83/572 (14%) Query: 257 LAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSD 316 + + L + + F + + + G + Sbjct: 204 IRDFPEAHQEIKSGIDFLLIDEYQDTNTSQFELARHLVADHNRIFAVGDDAQSIYSF--R 261 Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILEL-ENRAVAGVNIEEFSRSDNKRPLDP--LDSS 373 + +F L ++ + + A IE + K Sbjct: 262 GARIANILSFKQAFAGAKLFKLEQNYRSTGHIVSSANALIEHNQQRIPKEVYTDLGEGEK 321 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + + S E L D + ++ + D ++ F Sbjct: 322 LQLYHYTSSDEEATRLIDIITQR-HDEEQIPLSDQTILYRTNAQSRK-----FEEVLLSE 375 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY I A + ++ I+ L L + + + P R I ++ + + Sbjct: 376 GIPYVIYGGMAFYARAEIKDAIAYLQLIINPHNELALRRAIAYP----RKGIGDKTIEKV 431 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + + + Q + L + + + Sbjct: 432 ALYAQQH------------------SPQLSLYDALC----------------AAIDSADP 457 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 GL + +AS + ++ LEEW+ E Sbjct: 458 VGLSRGVRNKIASFVNLIDSLASAYQHYAKLEEWIAHILRESGIVAELTREDTVESQAKL 517 Query: 614 QQWQAIIAEGLGAQYG-DAVPLSLLRD-----ELAQRLDQ-------------ERISQRF 654 + I+ + PL+L + EL Q E+ S Sbjct: 518 DNLKEFISSASEFEARYRQDPLNLFAEEPLGTELLSAFAQQIPLLTNQDQDNVEQQSGVA 577 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 L + + T+ + + F V + G+ + + P + +++R Sbjct: 578 LQDRLQLMTIHVAKGLEFPYVYIAGVEENLLPSSRS------------LDTAEMIEEERR 625 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 L + AQ+ +SY ++ PS + EL H + S Sbjct: 626 LLYVGITRAQKLCTLSYTSIRTRNGKTELMIPSRFIAELPRAHYTLHEEAAPIGTSV-RS 684 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 A T P +Q A+ Sbjct: 685 YANSYQPTTNSQRPTATSPSASSATAQQMLAK 716 >UniRef50_A6NZ65 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZ65_9BACE Length = 830 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 77/574 (13%), Positives = 172/574 (29%), Gaps = 84/574 (14%) Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN--PLLASW 303 Y ++D L + + + D QD N LLAS Sbjct: 248 EYEKRLRDANALDFDDIILHTVRLLKEFDEVREYYQRKFRYVLIDEYQDTNNLQYLLAST 307 Query: 304 GKLGRDYIYLLSDLESS---------QELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 G + I ++ D + S + + +F + ++ + +N A Sbjct: 308 LAGGYENICVVGDDDQSIYRFRGATIENILSFESQYKGARVIRLEQNYRSTKNILEASNA 367 Query: 355 IEEF---SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + + + + + E + + ++L +D V+ Sbjct: 368 VIRNNEGRKGKELWTDHGEGDKVQCYTAMNEHDEAQYVAAQILGSFSA--GRHWKDHAVL 425 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 +++ S I A +PY I ++ ++ L + ++ + Sbjct: 426 YR-MNAQSNQI----EQAFKRNGVPYRIIGGIRFFDRAEIKDMLAYLCVINNPGDDLRLQ 480 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +++ P I + + + G Sbjct: 481 RIINNPP----RGIGATTIERAQTIAAQEG------------------------------ 506 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 + W+ ++ + + LAS + R+ + + + Sbjct: 507 ---------RSLWE-IISNARVYPELQKAAAKLASFTDMIAELRKLSGEMELPAFYEELV 556 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 A L T T +E + + + + L+ DE+ L + S Sbjct: 557 ARTGYAVMLEQKNTIEDRTRLENVQELLTSINGYLENAVEPSLAGFLDEI--ALYTDLDS 614 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 V + T+ + + F VV ++G+ +G++P A G+ ++ Sbjct: 615 HDPEEDCVVMMTMHSAKGLEFPVVFVVGVEEGIFPGIRA------------IGEAEEMEE 662 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELI-DYIGQSHYLPGDEALN 768 +R L A+ A++KLY++ + + PS + E+ +Y+ +S LP E Sbjct: 663 ERRLCYVAMTRAKEKLYMTCASQRMLFGRTNNNRPSRFLGEIPEEYVEKSGRLPRSERTE 722 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 + + K R P + G +Y Sbjct: 723 EKQDGEQPKKK--APAWRKPAERGYSLGGGYTTY 754 >UniRef50_B6V2U6 Gp34.33 n=3 Tax=Bacillus phage SPO1 RepID=B6V2U6_BPSP1 Length = 978 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 54/471 (11%), Positives = 131/471 (27%), Gaps = 76/471 (16%) Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 G ++I + +Q++ + + ILE+ N + + Sbjct: 573 GAKPEEFIDFTKTYKGAQQISMEDNYRSN-------PHILEVANNLIKNNQKRLPKKLVA 625 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 + D S H S E + + + + +E+ P+DI ++ Sbjct: 626 NKQNDETCVSFEVHE--SEIEEAKKVVEEIKLQVEQG-GKNPKDITILYRTNAQ-----S 677 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 +PY I + ++ I L L E +++ P Sbjct: 678 RALEDYLIISGIPYVIHGGTSFYERKEIKDLICYLRLVADSNDDEAFKRVINTP----SR 733 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 + + + ++++ D + + P+ + Sbjct: 734 YLGKAFMEKVKRF----------DGSHWEAITEPSMSWKNYEQ----------------- 766 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 + + L+ +L A + V +L+ + Sbjct: 767 ---------------KGINEFVDLVEELKSVAEHGAGDFGEGSPTEVIDYLLDNCYKKHM 811 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 E + + + E L + ++ + Q + V + T Sbjct: 812 SNELTSDDFSSRMENV--ETLKFVMEQHDSIESFLKHISDLMSQAKHDI----DGVQLMT 865 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISA 723 + + + F ++G+++G P A ++ G + +++R L A+ A Sbjct: 866 IHKSKGLEFDTAFVIGVSEGCLPHFRAIESYND-------GRKQAIEEERRLLYVAITRA 918 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 + +IS + S +EL I D ++ Sbjct: 919 ESVCHISAPKTFL--GKPAPVSRFSKELGIEILDMSGTDVDLEDADVDTSD 967 >UniRef50_Q2STJ5 ATP-dependent DNA helicase Rep n=90 Tax=Bacteria RepID=Q2STJ5_BURTA Length = 848 Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 73/585 (12%), Positives = 157/585 (26%), Gaps = 104/585 (17%) Query: 191 QRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGD 250 + + + L R ++ + L L + P R W + Sbjct: 314 EEAMTIAANEDEHQAALVYRNYV---ATLHAYQAVDFDDLIRLPTELFAKNEPVRDRWQN 370 Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 + + + L R + A + G L + +LG+D+ Sbjct: 371 RLRYLLIDEYQDTNACQYELLKLLAGPRAAFTAVGDDDQAIYGWRGAT-LENLAQLGKDF 429 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 L +++ Q+ + A I + K+ Sbjct: 430 PKL-------------------HVIKLEQNYRSTVRILTAANNVIANNPKLFEKKLWSEH 470 Query: 371 D--SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 SIT C+ + E E + RL + + + RD ++ F +F Sbjct: 471 GMGDSITVTPCNDEEHEAESVVFRL-SAHKFERRTQFRDYAILYR-----GNFQARIFEQ 524 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 +PY +S ++ ++ + L L + + + P R I Sbjct: 525 VLRRERIPYVLSGGQSFFDKAEIKDLCAYLRLIANADDDPAFIRAVTTP----RRGIGNT 580 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L L + ++ + +++V Sbjct: 581 TLEALGAFAGQAKV---------------------------------------SLFEAVY 601 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + L A + L + +E + + +L DA E Sbjct: 602 MGGIEARLSARQIEPLRIFCDFIQRLTDRADKEPATVVLDDMMEAIHYEAYLYDAYDERQ 661 Query: 609 MTLIEQQWQAII------------AEGLGAQYGDAVPLSLLRDELAQRLDQERI------ 650 Q + E + + L D L + Sbjct: 662 AQTKWQNVLEFLEWLKRKGTKPEPDEAVDGEAEGFHNADGLADTGKNLLGLIQTVALMSM 721 Query: 651 --SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 + V + T+ + + + V L+G+ +G+ P D R Sbjct: 722 LEGKEEDPDAVRLSTVHASKGLEYPHVFLVGVEEGIMPHSGGSDDG--------PIDDER 773 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP--SVLVQEL 751 +++R L A+ AQ+ L++++ + + S + E+ Sbjct: 774 IEEERRLMYVAITRAQRSLHLNWCKKRKRARETIVCEQSRFIAEM 818 >UniRef50_D1PLS4 Putative ATP-dependent nuclease subunit B n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLS4_9FIRM Length = 1094 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 76/591 (12%), Positives = 175/591 (29%), Gaps = 87/591 (14%) Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 + + V+ D Y ++ F + +P + ++ A ++L L Sbjct: 309 GMPYHRMAVICRDAAQYLGPLRYEF----RLQNIPLFCDEATTPENTAPARAVHAVLDLA 364 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 S S VL LL ++ ++ E L + W + + Sbjct: 365 RSGVSSRTVLRLLKTGLV----NLPERQQTALENYA----YTWSLKAAD----------- 405 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL---------ASLLMQLN 572 WR TR GYA + ++ + + + E + A+L Q+ Sbjct: 406 --WRAPFTRSAAGYADVERAEDVRTREEAEAARVFLMERIQKFLPRVKNAGAAALTKQVY 463 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 ++ + L E L R + ++ + + + Sbjct: 464 LFLQSLGAEDTLNALAETLR------GQGRMPEADEVLREWNVVMGLLNQLAQLLGEEEL 517 Query: 633 PLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 P + + L + + V + T MR V ++G+ +G +P+ Sbjct: 518 PPADYAELFTLLLRTTDMGHIPQSLDSVILTTAGRMRLPETDAVFVVGLLEGEFPKTPGD 577 Query: 692 LGFDLMSQKP---KRGDR------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 G + + ++G ++ + F +A+ +A+ L++S+ G + ++ Sbjct: 578 QGLLTHADRDAMIRQGAELPDCFENKVLREGVCFYKAMTAARSFLWLSWPGAAHAEDDT- 636 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 S + + + P L + A + + + + + Sbjct: 637 PASSALAPVRRLLQVPFAGPSTAELGASPAAALDILGVISQQPGREGEGEALRAALEDAE 696 Query: 803 A-------REWLPAASQAGKAHSEFVQPLPFTLP--ETVPLETLQRFWAHPVRAFFQMRL 853 E + A + + L L V +++ P F Q L Sbjct: 697 GTPQSAPGYEAVRRAREKAEPAVRDTGALEKLLGPGLRVSPTRFEKYQTCPFGYFMQFVL 756 Query: 854 QVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFG 913 + R + P+ + +L + + AF Sbjct: 757 RAAPRQKAELAPN---------ISGTLTHWVLENALRRQG----------------AAFK 791 Query: 914 EIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQ--ITGWLPQVQPD 962 ++ E +++L PG ++ + ++ + G L +Q D Sbjct: 792 DLTAEELQALVEELVAEYTQANLPGITVRMQYLIERIRRNLVGLLGFIQRD 842 >UniRef50_B0MQS6 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQS6_9FIRM Length = 1132 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 87/742 (11%), Positives = 187/742 (25%), Gaps = 92/742 (12%) Query: 231 GKHIEIHLLFTNPCRYYWGDIK------DPAYLAKLLTRQRRHSFEDRELP--LFRDSEN 282 + + +HL GDI D K RQ + + + D Sbjct: 143 AERLPVHL------AEKMGDIAAVYSVYDKKLTEKYADRQDNLTLAAQVIRNGDSFDENT 196 Query: 283 AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDI 342 + D L + G +++ L E+ E+ A D T + DI Sbjct: 197 TIYIDGFDSFSGAQQNFLRALADKGVNFVVALCTDENKAEVFATCDRTERLFERGNREDI 256 Query: 343 LELE-----NRAVAGVNIEEFSRSDNKRPLDPLD-SSITFHVCHSPQREVEVLHDRLLAM 396 R G D IT S E + + + + Sbjct: 257 KYTRLCGKAPRYKNGNLKALRDFLQTGVKDSKADSDGITMAYSSSVSGEADFVCANIRKL 316 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + DI V+ A Y + + +P P+L F + Sbjct: 317 V-RSEGYRYSDIAVICASPAKYKDAVNSAAARYD----VPVFADLPVPISEKPMLRFFEA 371 Query: 457 LLSLPDSRFVSEDVLALLDVPVLA--------ARFDITEEGLRYLRQWV-NESGIRWGID 507 LL D+ ++L + + +T + + Q + E W + Sbjct: 372 LLKAADNP-TGTNILRYIRSGFVRLPSEKNNGKTVPMTLKERHLVEQHLMEEYAECWDLK 430 Query: 508 DDNVRELELPATG-QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 ++ + P + + + + + G ELV + Sbjct: 431 ---RKKWDKPMPHITNASEQRVEEIRIATVTP----LVEFAKSVRGIGG--RELVKKFTA 481 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 L + C+D E + + ++ Sbjct: 482 FL---------FDKVDISAAIQGKCQDNSTRQLRYVKELTEEYNQLWRTVSEMLTSLYET 532 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 + L+ + + IS+ V RS K V ++G DG + Sbjct: 533 LDDTPLTLAEFSALIHSCASRISISRTPNVLDSVLFGDPARTRSREVKAVFVMGAADGAF 592 Query: 686 PRQLAPLGFDLMSQ---KPKRGDRSRRDDDRYL------FLEALISAQQKLYISYIGRSI 736 P S + D +D+ +A+ A +KL+I++ Sbjct: 593 PDIYPEGNSVFTSDDVQRLAENDIELENDEARYSSAVLDAYKAMTLAGEKLFITFT---- 648 Query: 737 QDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP 796 + S + ++ G + + +++ D Q Sbjct: 649 --GEKENASEYIADIAKRFGAELINVDNLDALYMTESVKSAEKQYVINSAQLTDGQKKAV 706 Query: 797 GERQSYAR---------EWLPAASQAGKAHSEFVQPLPFTLPET-VPLETLQRFWAHPVR 846 S + + + + P P+T + +++ Sbjct: 707 EAVLSENEKEPSSIDRIKAVMSNNSGNSDIHRISDIAPIVFPQTALSPTAIEKLNGCKFA 766 Query: 847 AFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGD 906 F + + ++ + + I ++ E R Sbjct: 767 YFLRYGMNLSSSAGI---------AMNASNYGNIMHYIMKYCFENMYD---GARENGNPH 814 Query: 907 LPYGAFGEIFWETQCQEMQQLA 928 + G ++ + + ++ Sbjct: 815 VSDGRIKDLIEQALAEYREKYL 836 >UniRef50_C7MAK0 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=C7MAK0_BRAFD Length = 932 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 77/519 (14%), Positives = 150/519 (28%), Gaps = 49/519 (9%) Query: 257 LAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSD 316 L + R L + ++ + VG+ AS +G D + Sbjct: 315 LLRENPAIREGYRRRFRHLLVDEYQDTNTAQYQLVRELVGDDPHASLTVVG-DSDQSIYA 373 Query: 317 LESS--QELDAFVDVTPDNLLHNIQSDILELENRAVAGV---NIEEFSRSDNKRPLDPLD 371 + + + F P ++ + +N A E R N Sbjct: 374 FRGATIRNIIEFEQDFPSARTIVLEQNYRSTQNILAAANSVIEENEGRRKKNLWTDQGEG 433 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 IT +V Q E + ++ A++ D DI + + Sbjct: 434 EQITLYVADDEQAEARYIGRQIDALV--DDGRRAGDIAIFYR-----ANAQSRALEDQLI 486 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 LPY + ++ I+ L + + ++ +L+VP + I + Sbjct: 487 RIGLPYRVVGGTRFYERREIKDAIAYLQVLANPADEINLRRILNVP----KRGIGDRAEA 542 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML----LGYAMESAQGEWQSV 547 + I G + R E P + T + L G + + Sbjct: 543 AVAMLAERERI--GFGEALRRAEEAPGIATRSLNAVRTFVAMLEDLQQMAADGDGPAELL 600 Query: 548 LPYDESSGLIAELVG--------HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 + SG AEL G L +L +++ AQ + D +A Sbjct: 601 EAILQRSGYYAELQGSDDPQDESRLENLAELVSVAAEFEAQAEEEDALASEYEDEADAPA 660 Query: 600 LPDAE-TEAAMTLIEQQWQAII-AEGLGAQYGDAVPL-SLLRDELAQRLDQERISQRFLA 656 I L A L ++++ D ++I Sbjct: 661 TDTPGTEAPETEAPGAPGADIAPDAALTAPDDPEASLVDRFLEKVSLVADADQIPGEEDQ 720 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 V + TL + + F VV L GM DG +P + + ++ + Sbjct: 721 -FVTLMTLHTAKGLEFPVVFLTGMEDGTFPHNRTLSDPEELEEERRLA------------ 767 Query: 717 LEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELID 753 + A++KL+++ + S + E+ + Sbjct: 768 YVGITRAREKLFLTRAQMRALWGQTQFMPASRFLDEVPE 806 >UniRef50_B9X9R1 UvrD/REP helicase n=1 Tax=bacterium Ellin514 RepID=B9X9R1_9BACT Length = 689 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 62/500 (12%), Positives = 141/500 (28%), Gaps = 98/500 (19%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEF 358 + +G G + LL P+ + ++ + A I+ Sbjct: 253 QSIYGWRGAEISNLLD----------MEKHFPEVKVVKLEQNYRSTNVILTAANAVIKNN 302 Query: 359 SRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 R K+ IT H S + E + + +++ + ++ Sbjct: 303 LRRRGKQLWSDKGQGTKITLHTFESDEAEAKAIVEQI-EFKRLASRIPWSQQAILFRT-- 359 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 +A + Y + ++ ++ F++ L L + +L + +V Sbjct: 360 ---NIQSRALETALRQGQVRYHLIGGQSYFDRREIKDFLAYLKLFINPNDDISLLRIANV 416 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P +++ + L +E Sbjct: 417 PA----RGLSDVTMERLLAASHERKC---------------------------------- 438 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA--QERPLEEWLPVC--- 591 ++++ ++ + + + + R L+ Q L+ W Sbjct: 439 -----SVYEAMKNPMVTTSFLTRTRESIEEFVKFVEETRAPLSSGQSMSLKVWAEKFLTE 493 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQ--WQAIIAEGLGAQYGDAVP-------------LSL 636 L + EAA + I+ E L Sbjct: 494 TGYLEELRRSEKTAEAADNRVRNLKDLTGILDEDNHTIVAGPDGTHQPVLTNDPADRLQT 553 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 +EL + + + V + T+ + + F V ++G+ DG+ P + + L Sbjct: 554 FLEELTLD-SERKEEKEAQGEAVTLITMHSCKGLEFPHVYIVGLEDGLLPHSRSKVEGTL 612 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDY 754 D++R LF A+ A Q L ISY + PS ++EL + Sbjct: 613 -------------DEERRLFYVAITRAMQTLTISYCTGRKKYGQVMPCHPSGFLKELPEE 659 Query: 755 IGQSHYLPGDEALNCDESEA 774 + + + + + + Sbjct: 660 LVELGDEKAKQPVTVNTGKN 679 >UniRef50_D1YX62 Putative ATP-dependent DNA helicase n=1 Tax=Methanocella paludicola SANAE RepID=D1YX62_METPS Length = 1087 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 76/694 (10%), Positives = 184/694 (26%), Gaps = 121/694 (17%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 + IL +R + + K L + +P+ + + + + ++E+ Sbjct: 344 NAILRTAHRLIVNNYDDPEETKLLKSALGVEGDKVKLIRTSNPKEQARRVIEEIERIVED 403 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 D + I V+ S + +Q+ F R +P+ + P + ++ L Sbjct: 404 D--IDFNRIAVLFRSHSS-ANAVQSAFE----SRSIPFQLISNNGFLKRPEVRTALAYLY 456 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + + + +L ++ +T + L + Sbjct: 457 VIANLEDPRYGADQMWWKLLHYKYGLTMKDSHILAKAAKR-------------------- 496 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 Q+VL L + + SLL ++ R+ Sbjct: 497 ----------------------DTIQNVLLGKLPDALSWDGKKKINSLLAKIEELRKN-- 532 Query: 580 QERPLEEWLPVCRD---MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 + + L L + + T L + ++A D Sbjct: 533 KNKSLSNLLLDVYEASGLSRELSHESTRTSRIWMLNLRYLHDLVAGFEDFYGADLAGFIE 592 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA------ 690 L + + A V + T + + + V ++ + +P Sbjct: 593 YMRMLDELGEDLDAPTLKEAQGVVLMTCHGAKGLEYDYVFIVDLAKDKFPITAGGRAPLL 652 Query: 691 ----PLGFDLMSQKPKRGDRSRRD------------DDRYLFLEALISAQQKLYISYIGR 734 F + + D+ + ++R L A A+++LY+ + Sbjct: 653 PDELNDRFRDIFEAEWESDKELDEALKARKRELRLKEERRLAYVAYTRAKKELYLCHPQS 712 Query: 735 SIQDNSERFPSVLVQE-------LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 ++ ER PS+ + E + D I + K Sbjct: 713 YGEN--ERSPSMFIAESCFEDNSVHDDIELIQDDEVKVGEMAKDGALDKKKDEIKRLVLS 770 Query: 788 PFDPQN-YQPGERQSYA-------REWLPAASQAGKAHSEFVQPLPFTLPE--------- 830 D + Y +P A++A + + ++ + P Sbjct: 771 TIDSEPQLALYNLLLYQGLCCHNLPSGIPEAARAREDAALIMKDIGDGTPLGLKFDPEEV 830 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE 890 + +L+ + P + L++ R +D E + L + L + Sbjct: 831 VLSHSSLKIYRDCPKKFELARLLRMPSRYDDEEEGE------GALGFGTFVHEALELAAK 884 Query: 891 QD-----DAERLFRRFRAAGDLP--YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEI 943 + + + ++ ++T +R Sbjct: 885 NKVKSRQELDDIAAELLKEPGYKDIDVKRAKVIFDTFWAR-----NRTKLGNVVMTEQAF 939 Query: 944 DLACNGVQITGWLPQVQP-DGLLRWRPSLLSVAQ 976 G + +G + +V +G + Sbjct: 940 SFELGGFRFSGKIDRVDELNGNGEVEIIDYKTGR 973 >UniRef50_Q1DC55 ATP-dependent DNA helicase PcrA n=2 Tax=Cystobacterineae RepID=Q1DC55_MYXXD Length = 783 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 65/579 (11%), Positives = 154/579 (26%), Gaps = 77/579 (13%) Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG 307 +GD+ ++ R + D + + P A+ +G Sbjct: 193 FGDLLLLLVTLFRTRPDVLENYRRRFHHVLVDEFQDTNPVQYALLKQLAPPPSANLVVVG 252 Query: 308 RDYIYLLS-DLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKR 365 D + + F P + ++ + +N A I + +R K+ Sbjct: 253 DDDQSIYRWRGADVDNILGFPRQYPGAKVVKLEQNYRSDQNILDAAHEVIRKNTRRMEKK 312 Query: 366 PLDPL--DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 ++ + + E + + ++LA+ + + + + V + Sbjct: 313 LWSERQRGQTLNLMLNRDERAEGQEVARQILAL-QREGFIKLSSMAVFYR-----ANAQS 366 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 V A +PY + R+ + + L L + D+L ++++P Sbjct: 367 RVLEEALRLARVPYTLVSGRSFYDRAEVRDASAYLRLMVNPRSDADLLRIINIPA----R 422 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 I + + + + N G+ Sbjct: 423 GIGDTTVERVTDFANARGVSLY------------------------------------EV 446 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 +G + + +LL L + + + + + ++ + Sbjct: 447 LSQPEQIPALNGAAVKRLKGFRNLLESLTAFAQTNEEAAGAVDQMLRETKLVETLQAEGS 506 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGD---------------------AVPLSLLRDELA 642 + +++ E + + L+ L Sbjct: 507 DESQTRAENLREFLGAAQEFDLNRAAAAVAAAANPPSDVPPEVDAAPLTADVPALQAFLE 566 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 Q G V + TL + + F V L GM + V+P A + Sbjct: 567 QISLVGEADAEVGDGRVALMTLHAAKGLEFDAVFLTGMEENVFPHSRAVKSESTFLNEVA 626 Query: 703 RGD---RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQ 757 D ++R L A+++L++S R+ PS ++++ + Sbjct: 627 SADGEPSEEMAEERRLCYVGFTRARKRLFVSLAQCRSLFGELRYNAPSRFLRDVPPALFG 686 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP 796 EA + + D Q Sbjct: 687 ISEQEVPEAPRPMVPSTQRRRTWDEDDGPR-IDRSYSQA 724 >UniRef50_Q6XYV7 ATP-dependent DNA helicase n=2 Tax=Spiroplasma RepID=Q6XYV7_SPIKU Length = 729 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 60/441 (13%), Positives = 143/441 (32%), Gaps = 70/441 (15%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSP 382 F P + + ++ N+ + N + + + Sbjct: 266 FDKYFPHTQTIVLNENYRSTQSILSLANNLIIHNKNRIEKNLFTIKASGQLPILYHGANS 325 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 E + + ++ ++ ++ DI+++ + ++ +A AD + Y I Sbjct: 326 SDESDFVARKIKTLI-KEENYDYNDILILYR-----ANYLSRDLETALADYGISYRIFGA 379 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 ++ ++ L + + + +L +L + I + + Q + + I Sbjct: 380 FKFYERKEIKDALAFLKIIMNN-DFLAIERIL---LLIPK--IGPKTFEQIMQILKDQQI 433 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 + + +L LP QH+ ++L A + + Sbjct: 434 MFTTLLEQHFDL-LPLNLQHSLNKVREAIVLALA-----------------QLPTVKSIE 475 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L LL+ + + L E + I + Sbjct: 476 SLLVLLLDKTGYLQRLR-------------------------DNYEEEREENILELIASI 510 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 G Q + + L E Q + + S +++ T+ + + KVV ++G+N+ Sbjct: 511 GKFDQQNKELAGTELLSEYLQLISLQTDSDNLTDNTISLMTIHNAKGLEKKVVFIVGLNE 570 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI-GRSIQDNSE 741 G++P A + + +++R A+ +++ L+ISY G S +E Sbjct: 571 GIFPTTQAI-----------KMGTEQLEEERRALYVAITRSEELLFISYADGYSYITGNE 619 Query: 742 RFPSVLVQELIDYIGQSHYLP 762 RF S ++EL + + Sbjct: 620 RFESRFIKELDNDFYEKVNSE 640 >UniRef50_B0RZ36 ATP-dependent DNA helicase n=21 Tax=Bacteria RepID=B0RZ36_XANCB Length = 658 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 55/449 (12%), Positives = 118/449 (26%), Gaps = 73/449 (16%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 + +L N +A E I C + E E + + + L Sbjct: 279 NRVLRAANALIAHNPHEHL---KTLWSDQADGERIRVWECRDSEHEAEKVAAEI-SFLGT 334 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 + D ++ P A +PY ++ A ++ +S L Sbjct: 335 AKQVPWSDFCILFRGNFQSRPL-----EKALQLLRVPYHLTGGTAFLERQEVKDVLSWLR 389 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 L + L + P + ++ L L + + + +++ Sbjct: 390 LIVNPEDDAAFLRAVQSP----KREVGATSLARLAELASAKSVPMSRAAESMG------- 438 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 A + +L + L Sbjct: 439 -----------------------------ALQHLPPRAANGLSAFTDILRDMREHSATLP 469 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 + +LN + + S L Sbjct: 470 AGELVRTLADK-SGLLNDLRNQSKDEAGFQRRKRN-LDELAEWFE--GGPRGASASDLAA 525 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 +LA ++ V + T+ + + F+ V ++G DGV P +++ +L Sbjct: 526 QLALLSRNDKDD---GGNQVRMMTMHASKGLEFRYVFIVGCEDGVLPHEVSLEEGNL--- 579 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQ 757 ++R L + A+Q+L++SY + + PS E+ + Sbjct: 580 ----------QEERRLLYVGITRAKQQLWMSYSKLTRKFGEHVRLKPSRFFDEIP--AAE 627 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTR 786 D + + + R A L + Sbjct: 628 LQRDGADPVADAERKKERANAGLAAIQAL 656 >UniRef50_B5E4P4 ATP-dependent helicase/deoxyribonuclease subunit B n=32 Tax=Streptococcus RepID=ADDB_STRP4 Length = 1091 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 85/666 (12%), Positives = 214/666 (32%), Gaps = 92/666 (13%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQRE 385 + D + + D + +R + + ++ C + + E Sbjct: 251 YQTPAQDCSQTHEKMDSFDKASRLLESSYD---FSELALDVDEKDRENLQIWSCLTQKEE 307 Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 +E++ + L E+ L+ + +++ D+ SY ++ +F +P+ + A Sbjct: 308 LELVARSIRQKLHENSDLSYKHFRILLGDVASYQLSLKTIFDQY----QIPFYLGRSEAM 363 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 HP+ + S+L+L RF ED++ LL + D+++ + Q++ GI Sbjct: 364 AHHPLTQFVESILALKRYRFRQEDLINLLRTDLYT---DLSQSDIDAFEQYIRYLGING- 419 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 + + T H +F L R+ + L A Sbjct: 420 -----LPAFQQIFTKSHHGKFNLERL-----------NVLRLRILAPLETLFASRKQKAE 463 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 +LL + +++ + A + L++ + + + + + ++ + Sbjct: 464 NLLQKWSVFLKEGAVTKQLQDLTTTLEAV----------EQERQAEVWKAFCHVLEQFAT 513 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGV 684 G V L L + + V + + + + V +G+ Sbjct: 514 VFAGSQVSLEDFLALLHSGMSLSQYRTIPATVDTVLVQSYDLIAPLTADFVYAIGLTQDN 573 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDD--------------DRYLFLEALISAQQKLYIS 730 P+ L++ + ++ ++ +RY L + SA+++L++S Sbjct: 574 LPKISQNTS--LLTDEERQNLNQATEEGVQLLIASSENLKKNRYTMLSLVNSARKQLFLS 631 Query: 731 YIGRSIQDNSERFPSVLVQELIDY-IGQSHYLPGDEALNCDE--SEARVKAHLTCLHT-- 785 S+ + SE S +QELI + + + L+ ++ S + + L H Sbjct: 632 AP--SLFNESESKESAYLQELIHFGFRRREKRMNHKGLSKEDMGSYHSLLSSLVAYHQQG 689 Query: 786 -----------RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE-TVP 833 + + Q +P + + + +Q L E + Sbjct: 690 EMSDTEQDLTFVKVLSRVIGKKLDLQGLENPAIPTSPSSKTLAKDTLQALYPAKQEFYLS 749 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD 893 L F+ + F + L + + S ++ ++ + Sbjct: 750 TSGLTEFYRNEYSYFLRYVLGLQEELR---------LRPDARSHGNFLHRIFERALQLPN 800 Query: 894 AERLFRRFRAAGDL--PYGAFGEIFWETQCQE--------MQQLADRVIACRQPGQSMEI 943 + +R A F I+ E+ + + + ++ ++++ Sbjct: 801 EDSFDQRLEQAIQETSQEREFEAIYQESLEAQFTKEVLLDVARTTGHILRHNPAIETIKE 860 Query: 944 DLACNG 949 + G Sbjct: 861 EANFGG 866 >UniRef50_C8PAK3 ATP-dependent exonuclease subunit B n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PAK3_9LACO Length = 1157 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 72/600 (12%), Positives = 189/600 (31%), Gaps = 62/600 (10%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + S E+ + + + + +D +V+ ++ Y ++ +F Sbjct: 302 VHLIKADSRYAEINFVAQTIYQQVVFNH-YRYKDFLVLAPNLSEYETYLTPIFSQ----N 356 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE----EG 489 + ++ + HP++ ++ + D F ++D++ +L +L + + Sbjct: 357 NISMFNDLQKQMKFHPLVVMIENIADINDMGFKTQDIITILKTRLLIPEWYTDDIKFIAD 416 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + L +V I + + + L ++ +E Q ++ Sbjct: 417 VDLLENFVLAHNINHQLWKKSFYDFVDNNISH------LDQI--NEKVEKLDKLRQFIIE 468 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 ++ + ++ + + + LE+W A D + Sbjct: 469 NIDNLITQLHKLTNVQEAVTLFWNFLLKNKINKKLEKWRNT------AINNGDLQLAQQP 522 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMR 668 I ++ + + + D L + SQ V + + ++ Sbjct: 523 EQIWALLNKLLKDYVLIA--EEFNTENFFDILISGFSEANFSQIPSVLDAVTVSEIGMVQ 580 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFD----------LMSQKPKRGDRSRR---DDDRYL 715 + FK V ++G + P+ GF ++ + + + ++ D Y Sbjct: 581 NNSFKQVFIIGAVNNSLPKIQNKPGFLNIENINELNNSIADEQQYIENNQEVNNLDQTYQ 640 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI------DYIGQSHYLPGDEALNC 769 F + L A +YISY + N + S+ Q++ +Y+ + L+ Sbjct: 641 FGDVLSLASDGVYISYPIIN-VSNEKMEASIFYQDIKNTLNLTEYVQHDLPENQQQLLSF 699 Query: 770 DESEARVKAHLTCLHTRMPFDPQNY---QPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 + ++ L + D N P + + A+S K + Sbjct: 700 ITTPQASLGYIVYLKNKTNDDISNLLALTPSNQALLFDNVIQASSFKNKPVNLTPALAQE 759 Query: 827 TL--PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI-PDTEPFILEGLSR------ 877 + + L+ F+A+ F L ++ R E+ + + E + R Sbjct: 760 LYGNNINISISQLETFYANSYEYFLTYGLHLHKRFENELTNIQSGNYYHETMDRLVKYLK 819 Query: 878 -YQINQQLLNALVEQDDAERLFRRFRAAG---DLPYGAFGEIFWETQCQEMQQLADRVIA 933 ++++ L + + G +L F E ++ + +++ + Sbjct: 820 QHKLDFAELTKEKISVILANIQDELKTKGSYRELLGDPFNEFLFKCLDRTTKKVVNYWHQ 879 >UniRef50_B0SSS8 ATP-dependent DNA helicase PcrA n=6 Tax=Leptospira RepID=B0SSS8_LEPBP Length = 678 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 59/552 (10%), Positives = 154/552 (27%), Gaps = 87/552 (15%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP------------ 298 I P L + E L + ++ QL GN Sbjct: 193 ILLPKRLLAEFPEIAAYYQRKHEYFLVDEFQDTNQLQYEFLSLFRGNSDNLCVVGDDDQS 252 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 + A G + + + ++ + + +L I++ N + + Sbjct: 253 IYAFRGSNVQLILNFEREFPHAKVVRLLENYRSTSL-------IIQAANSLIQNNIGRKE 305 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 ++ P + ++ + E + R+ +L ++ ++I ++ Sbjct: 306 KTLYSRIPSAER---VEYYETADEREEAIFVAGRIQTLLIKNE-FKGKEIAILFRTNFQS 361 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 P F +R +PY + + IS L + +L +++ P Sbjct: 362 RP-----FEEELRNRSIPYKVVGGYNFFDRKEIRDCISYLRYVANPKDDYSLLRIINYP- 415 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 + I ++ L++ T + + +M Sbjct: 416 ---KRGIGPGTMQKLQEEA--------------------FTHKLSLYEIFHKM------- 445 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE-EWLPVCRDMLNA 597 + D + A++ + + ++ +++ A + L + + Sbjct: 446 --------IESPDYLPEVKAKVRQEIYQFVEMVDAFKKKFAMSQKLAPVLREMITQIGFE 497 Query: 598 FFLPDAETEA-----AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 + ETE + + + + + L ++ E Sbjct: 498 REISMEETEEKVVKARIYNLSELVNMLSFFEEEEGREGKATIFDFLQRLVLLMEDEPKED 557 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 V + T+ + + + +V L+G+ +G+ P + + Sbjct: 558 EEDR-RVQLLTMHQSKGLEYDLVFLVGLEEGILPNSRVIEEEGEVVDEE----------- 605 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCD 770 R L + ++KLY++ + + PS + EL + + Sbjct: 606 RRLLYVGMTRPRRKLYLTSARTRRKFGEQIESAPSRFLNELSQDAVLFFPMETKDRDTET 665 Query: 771 ESEARVKAHLTC 782 ++ L Sbjct: 666 KNFLEELDKLKV 677 >UniRef50_D2R5I6 UvrD/REP helicase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5I6_9PLAN Length = 800 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 58/552 (10%), Positives = 149/552 (26%), Gaps = 83/552 (15%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYI 311 +P +L R R ++ + L + G+P + +G G + Sbjct: 217 NPEVRRQLDERYRYIMVDEYQDTNLAQYTIVRALSIDHPNLAVTGDPDQSIYGWRGANLS 276 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPL 370 +L F P + ++ + ++ +A I R K Sbjct: 277 NILE----------FEKDYPKVKVVRLEQNYRSTKSILHIADQLIRHNIRRKEKDLFTDN 326 Query: 371 DSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + + + E E + + + + PRD + + Sbjct: 327 PQGNRVRLATFPTQRDEAETIAEEIAHEVRTGK-RRPRDFAIFYRT-----NALSRQIEH 380 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A ++ +PY I + ++ ++ L L ++ +L +++ P I + Sbjct: 381 ALREQVIPYQIVNGLEFYQRKEIKDVLAYLQLVNNPRSDAALLRIINTP----TRGIGKS 436 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + +++ + I + Sbjct: 437 TIAKIQEVARDRAI---------------------------------------PLLDAAR 457 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 SGL + +A + L+ G P+EE + + + Sbjct: 458 MAGTISGLAKKSAVAVAKFVAMLD--LIGTKATAPVEELVGYVLTETGYREVLENSEAEE 515 Query: 609 MTLIEQQWQAIIAEGLGAQYGDA--VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + ++ + L + L + + + V + TL Sbjct: 516 DHERLANLEELLTAASEFDLRNPGGAGLEQFLE--DSSLVADTDAFESDSDKVTMMTLHA 573 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F V ++ +G+ P + + + + ++ + + A Q Sbjct: 574 AKGLEFPAVYIVACEEGLLPHERSRRDEEKLEEERRLL------------FVGITRAMQD 621 Query: 727 LYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 L +++ + S + EL + + ++ L+ Sbjct: 622 LTLTWAQYRMFRGQQAPAVASSFLMELPRHEMELIGGNMGRGSAPRYLAWDEESQLSPED 681 Query: 785 TRMPFDPQNYQP 796 + F P+ Sbjct: 682 DDLEFPPREQDA 693 >UniRef50_UPI00016C5306 ATP-dependent DNA helicase n=2 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5306 Length = 755 Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats. Identities = 58/461 (12%), Positives = 129/461 (27%), Gaps = 73/461 (15%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 VG+P + + G D +L + + L + A ++ Sbjct: 245 VGDPDQSIYKWRGSDIKIIL-------DFERDFPNARTITLAQNYRSTKSIIRAASVLID 297 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 + + + +P + + E E + R+ ++ T RD + + Sbjct: 298 HNKQRKKKDLVTDNPQGEPVNVITFDNGLDEAEGVVVRIKEAVKAG-TFKYRDHAIFMR- 355 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 + SA +P+ I A ++ L L + L ++ Sbjct: 356 ----INALTRSLESAFVKHGVPFQIVKGLAFFERKENRDVLAYLRLLTNPHDGVSFLRVV 411 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + P I + L L+ Sbjct: 412 NAPA----RGIGKVSLDKLQ---------------------------------------S 428 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 +A G + + + + + L + R + Q P E V Sbjct: 429 FAASQEIGLLAAAGQIAKITEIKGKAATGLRDFHRLMTDLRSKMDQP-PHELVRLVLDKS 487 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 L D+ E + + + A ++ ++ +++ L + Sbjct: 488 GYEAMLRDSTDEEDADRLANVSELVTAAKQFWDEDNSRTITDFLEQIT--LASDTDGWDE 545 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 A V++ TL + + F V +L + G+ P + + +++R Sbjct: 546 QADHVSVMTLHASKGLEFPAVYILAVEQGLLPH------------ERSLANDEEIEEERR 593 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFP--SVLVQELID 753 L + A ++LY+ + + S +QEL Sbjct: 594 LCFVGMTRAMKELYLCHARMREFRGQLNYCIVSQFIQELPR 634 >UniRef50_D1J8P0 ATP-dependent helicase n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J8P0_MYCHP Length = 745 Score = 185 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 44/434 (10%), Positives = 131/434 (30%), Gaps = 62/434 (14%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSP 382 F P+++ ++ + + A N+ + + +I F+ + Sbjct: 282 FDKDYPNSVTVKLEENYRSTKTILRAANNLISHNKLRLEKKLFTENEEGENIEFYCGFND 341 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + E + ++ + + + ++I ++ A Y + Sbjct: 342 EAEARWIATKISEL--KRNRVQLKNIAILYRTNS-----CSRAIEEALIKENTIYKLFGS 394 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 ++ ++ L + +L +++ P I + L + + Sbjct: 395 IKFYQREEVKDALAYLRVIHDG-SEISLLRIINKP----SRKIGNVTIEKLLSASKKYNL 449 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 G+ + H + + + Sbjct: 450 --GLFEYLETHFNQIQKELH---------------------------------ISGDTLK 474 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 +LA+ + ++ RR + + + + +F +E + ++I Sbjct: 475 NLANFINEIRWARRAIQTNAIHLTIKELIVNKIK-YFDEIKNSEEEYENKIDNFNSLIEA 533 Query: 623 GLGAQ-YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 + + E+ D++ A V++ T+ + + F V + + Sbjct: 534 IAEWEKKNPQGSIDEYLQEITLITDRDVEDD--AASFVSLMTVHNSKGLEFDYVFVACLA 591 Query: 682 DGVYPRQLA-----PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 + ++P + A F ++ K + + +++R L A+ A+++L +S+ Sbjct: 592 ENIFPLKRAISISPQDDFTFLNSKNFKENIEGLEEERRLAYVAMTRAKKRLMLSFSVGRN 651 Query: 737 QDNSERFPSVLVQE 750 N + S + E Sbjct: 652 GINRK---SRFLSE 662 >UniRef50_A5IY88 ATP dependent helicase n=2 Tax=Mycoplasma RepID=A5IY88_MYCAP Length = 734 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 65/540 (12%), Positives = 161/540 (29%), Gaps = 97/540 (17%) Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSDL 317 K + ++ + E L + VG+P + G D +LS Sbjct: 228 KWALKYSYILVDEFQDTSAIQYEIIKYLSSQKAQLTIVGDPDQTIYRWRGADVNLILS-- 285 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSI 374 F + + + + A N+ + N + I Sbjct: 286 --------FEKDFENTKTIILNKNYRSTKKILAAANNLIKYNRNRFNKNLVTDNSDGDEI 337 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + SP+ EV + ++ + + + ++I + F + Sbjct: 338 EYIHAFSPEAEVRWVVQKINDL--KKQKIQLKNIAIFYRSNSYSRN-----FEEQLMNEK 390 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 + Y I ++ ++ L + + +++VP I E L + Sbjct: 391 INYKIFGGEKFYQRKEIKDALAFLRVIYDGND-LQLKRIINVPP----RKIGEASLNKII 445 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 +A E +++++ + + Sbjct: 446 ---------------------------------------SFANEKNLSLYKTLVNHYKEL 466 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE------TEAA 608 + E++ ++ +LL +N ++ L Q + L + + + E Sbjct: 467 PVPKEVIINIIALLNCVNKYKAALRQGNKIHVVLKSFLKEIGFLKYVNEDVGLKGTGEEN 526 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + + + ++ L + + L S V++ T+ + Sbjct: 527 IRALLEGIKSW------EITNPNKGLKEYFEYI--SLISASDSSNESMSYVSLMTVHAAK 578 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F V L+GM + ++P A +++R L A+ A++KL+ Sbjct: 579 GLEFDNVFLVGMCENIFPNYRAYK------------VAEAMEEERRLAYVAITRAKEKLF 626 Query: 729 ISYIGRSIQDNS-ERFPSVLVQEL-----IDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 +S + + E+ PS ++E+ + + + + D L +E + + Sbjct: 627 VSDSRGLLLYSQTEKKPSRFLKEMGIDINKHILQKDNSIFVDGELEDEEQIRKRNKKIIA 686 >UniRef50_D1ACM7 UvrD/REP helicase n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1ACM7_THECD Length = 1128 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 86/751 (11%), Positives = 172/751 (22%), Gaps = 120/751 (15%) Query: 340 SDILELENRAVAGVNI-EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 ILE+ R G+ + + + E E + +R+ + Sbjct: 366 ERILEVAARIQQGLRADTANVPRLRPGEGRRGRGRVECALLPTVTAEAEHIAERIRRLRA 425 Query: 399 EDP------------TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 DP L I V+V P A +R +P + Sbjct: 426 ADPELAPDGLPWDEGPLKYSHIAVLVRRRSQIPPL-----RKALEERDIPVEVVGLGGLL 480 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 + P ++ ++ L + + LL P R+ I L L + Sbjct: 481 TVPEVQDVVATLRVVHDPTAGASLARLLTGP----RWRIGPRDLVALGRRARRLASENTR 536 Query: 507 DDDNV--RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 D P + R ++ + ++ + S E + L Sbjct: 537 DITPPPDASELRPEPAANAEETDPLRQVVIELTQETGSLVDALDDLGDPSAYSPEGLARL 596 Query: 565 ASLLMQLNIWRRG--LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L +L R L + E + + A ++ + + Sbjct: 597 RRLAAELRTLRSQVGLPLPDLVAEVERTLGLDIEVAARSGLDPAGARADLDAFIETAASF 656 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM-- 680 ++ + + V + T+ + + + VV + G+ Sbjct: 657 AEESENPTLGAFLAYLKAAESEEFGLPAGRVSESDSVKLLTVHAAKGLEWPVVVVPGLCY 716 Query: 681 ---------------------------------------NDGVYPRQLAPLGFDLMSQKP 701 G PR DL K Sbjct: 717 LPSGSGRPVKGSIFPSPPQQSTRWTDNPRLLPFELRGDYEKGNLPRLNGLTKADLDRFKD 776 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 + DR R ++R L A+ A L + PS ++E+ Sbjct: 777 ECADRDLR-EERRLAYVAVTRASHLLIATGHRWGATA-RPLHPSPFLEEIRQACETGAGR 834 Query: 762 PGDEALNCDESEARVKAHLTC--LHTRMPFDPQNY------------------------- 794 A +E A P + Sbjct: 835 VVSWADPPEEGAANPLQAEAEPGRWPATPEGRRYAAIVEGAEMVRDAMVGRIAPWAGDDG 894 Query: 795 --QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMR 852 + R+ A A + L LP + + TL P Sbjct: 895 LTEADRRRMTAWARDVELLLAERDRGRGGDVLQVELPAKLTVSTLVALSRDPQE--VARS 952 Query: 853 LQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAF 912 ++ + L Q+LL+ A+ GA Sbjct: 953 IRRPMPRPPAPYARRGTAFHRWLESRWGQQRLLDPDELPGAADE-------------GAA 999 Query: 913 GEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQP-----DGLLRW 967 + + ++ + R + + + G + V ++ W Sbjct: 1000 DDSMLTELQRRFEE--SEWASRRPLDIEVTFETVLGDRVLRGRMDAVFTAPDGGYEVVDW 1057 Query: 968 RPSLLSVAQGMQLWLEHLVYCASGGNGESRL 998 + + + L + + Sbjct: 1058 KTGRPPADEDFRHAAVQLAAYRLAWADLAGV 1088 >UniRef50_C9RM93 UvrD/REP helicase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RM93_FIBSS Length = 843 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 53/435 (12%), Positives = 107/435 (24%), Gaps = 71/435 (16%) Query: 326 FVDVTPDNLLHNIQSDILELENR-----AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCH 380 F + ++ + N +V N+ N + I Sbjct: 297 FHRDFAPVTIVKLERNYRSTANIVKGAGSVIAHNVRPAEMQKNVFSKEEAGELIHVRYFE 356 Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 + E + + P + V A D +P I Sbjct: 357 DDRAEASNIAKTVAQ---AGPDF-YAKTAIFYRTNAQ-----SRVLEKALNDLRIPSVIF 407 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 ++ ++ L + + L +++ P I + + Sbjct: 408 GGTRFWDRKEIKDVLAYLRVLANEKDDAAYLRVINTPP----RAIGKTTVE--------- 454 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 +L W ++L +G Sbjct: 455 ------------------------------GVLAKVKAGEGSFWDNLLAEANGTG---RG 481 Query: 561 VGHLASLLMQLNIWRRGL-AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 L + W+ + + E PL + E E + Sbjct: 482 APKLKVFTDLVTNWKNMMTSGEYPLPILAEHIINDTGYKDFLRKEDEVTADERIANLDEM 541 Query: 620 IAEGLGAQYGDA-VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 I L ++ L G V + T+ + + F V L Sbjct: 542 INAIREFDEEHPGATLDAFLQDI-SLLTDGDKKVDTSKGLVTLMTIHMAKGLEFNTVHLA 600 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 G +D ++P M++ + +++R LF A++KLY+ + R Sbjct: 601 GCDDEIFPLVRG-TSMLSMAEI-----NEQMEEERRLFYVGCTRAEKKLYLYHAERRFFQ 654 Query: 739 N--SERFPSVLVQEL 751 PS ++EL Sbjct: 655 GNIRPFAPSRFLKEL 669 >UniRef50_C6P8R1 UvrD/REP helicase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P8R1_CLOTS Length = 1088 Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 75/722 (10%), Positives = 194/722 (26%), Gaps = 129/722 (17%) Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 + LL E + L+ + L+ + +I + N + S ++ + Sbjct: 361 FKNLLEPYEELKYLNDTEEGPKVELITYNKQNIADPRNERFQSIKKLLKDDSKSEELHES 420 Query: 370 LDSSITFHVCHSPQR-EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 L I S + + ++ R+L +L D DI +++ +++V + Sbjct: 421 LMKDIK--KSESKRDFQGSIIASRILKLL--DEGYKYEDIAILLRS----RTGLESV-EN 471 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A +PY + + ISL L +L +L P+ F +++ Sbjct: 472 ALLKYGIPYCVIGGIGFWDKSEIIDIISLYKLVFDMSDKIALLVVLRSPI----FGFSDD 527 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + L N+ G+ ++ + + A + + Sbjct: 528 DVYNLMSIYNDEGLSNILEALEKLTCINRSNEW--------------IIVRAYNILKEIS 573 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + G E+ + L+ L + ++ F D Sbjct: 574 NLNGIYGAY-EIFEKILDLVDY-KKLLISLPNGYQKYRNIEKLEKIIKDFTDKDIFNARD 631 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + ++ LD E + V I T+ + Sbjct: 632 LVEYLSSFKEF-----------------------SGLDSEAFLDTEESDAVKILTIHASK 668 Query: 669 SIPFKVVCLLGMN------------------DGVYPRQLAPLGFDLMSQ---KPKRGDRS 707 + F+ V + M+ DG +L + + K Sbjct: 669 GLEFEAVIIPDMDKATDGVSIRHNHLFMLSEDGYMYGIGVNEEGELDKEANSRYKSAYDE 728 Query: 708 RRDDD----RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 + + R LF A A++ L + + Sbjct: 729 YLERENQESRRLFYVASTRAKRFL------------------AFIGQ---------EKNK 761 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW-----LPAASQAGKAHS 818 L + + L D + Y R + + Sbjct: 762 TSELQNETALNSFMKQLFYAMDIDDIDIAVLNGNDLLMYDRNIKICKSYDKSEIGKLKND 821 Query: 819 EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQV-----NFRTEDSEIPDTEPFILE 873 + +P + + + + P +++ + + ++ + + + ++ Sbjct: 822 NLIAEIPLKPQGNISITAYIDYLSCPKLYYYKYIAALNDEYIEEQLKNDDFYEYDALDID 881 Query: 874 GLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF---WETQCQEMQQLADR 930 L R I ++L + D+ + G + ++ + + L + Sbjct: 882 ALERGTIVHRILEN-ISILDSNASSPKNGIDGIDVDNGIKKYIDNYFKIIKEHRKVLKGK 940 Query: 931 VIACRQPGQSMEIDLACNGVQITGWLPQVQPDGL--------LRWRPSLLSVAQGMQLWL 982 ++ + L + + G + ++ ++ + ++ ++ + Sbjct: 941 LLKSLNEY-RFRVLLD-ENLNLNGVIDRIDIYENDGEIEAYIFDYKTNKINNDDEIEEVV 998 Query: 983 EH 984 H Sbjct: 999 NH 1000 >UniRef50_C2L0R7 ATP-dependent DNA helicase PcrA n=1 Tax=Oribacterium sinus F0268 RepID=C2L0R7_9FIRM Length = 793 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 61/458 (13%), Positives = 146/458 (31%), Gaps = 75/458 (16%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLDSSITF 376 + + + +F P+ + ++ + +A V I E K+ + Sbjct: 258 ANVENILSFESHFPNCKVVKLEQNYRSTAPILDLANVVIAENQHRKQKKLWTAEKEGLKV 317 Query: 377 H--VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 S + E + + D + +D V+ + Sbjct: 318 SFQEYESAKEEAAAVIRGIR-----DAGWSYKDQAVLYRTNAQ-----SRLLEEQCIHWN 367 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +PY I ++ +S + + ++ + +++VP + I E L L+ Sbjct: 368 IPYQIVGGVNFYQRKEIKDILSYMKILVNKKDDVALRRIINVP----KRGIGEASLLKLQ 423 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 Q+ G G+++ + LP+ +++ Sbjct: 424 QYGESLG--------------------------------GFSLVES-------LPFAKAA 444 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 GL + + + S L W + + ++ L + A + Q Sbjct: 445 GLSGKALSMVGSFQEMLESW-KDVELSALIDRILQD-TEYEKDLQAEGAIEAESRMENIQ 502 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 + Q + + + LS +E++ D +R + + TL + + F V Sbjct: 503 ELQGKLQSYIEENGDEG-SLSAFLEEVSLLSDLDRSDLTE--DKITLMTLHGAKGLEFPV 559 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V L+G+N+G++P + + ++ + LF + A+++LY++ Sbjct: 560 VYLVGLNEGLFPSAQSMFTPEEREEERR------------LFYVGITRAEKELYLTAGRD 607 Query: 735 SIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 + S V ++ + + YL + D Sbjct: 608 RVVHGQYQSMLVSSFVDDVPEEHLEKKYLYRKKPSEED 645 >UniRef50_Q0F272 ATP-dependent DNA helicase Rep n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F272_9PROT Length = 652 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 67/534 (12%), Positives = 145/534 (27%), Gaps = 93/534 (17%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD- 309 I L+ + S +L ++ D + + +G G + Sbjct: 198 IWRERARYFLVDEYQDSSRIQYQLVRLLVPDDGNLTVVGDDD-------QSIYGWRGAEV 250 Query: 310 --YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 L D + + + IL+ N +A + R Sbjct: 251 KNLFQLERDYTNLHVVRLEENYRSTGS-------ILQASNSLIANNSERLG---KTLRST 300 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 I +P+ E L + + V+ + F Sbjct: 301 LGQGKPIRVWGSPNPEEEARRLAGDIKSHHARSGG-QWDAYCVLYR-----ASFQSRSIE 354 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A + +PY +S + ++ ++ L L + + + P R I Sbjct: 355 LALREAGIPYHVSGGMSFFDRAEIQDILAYLRLIANFSDDLAFMRAIARP----RRGIGS 410 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + L L +AM ++ Sbjct: 411 KALGDLG---------------------------------------FFAMAEDCSLLEAC 431 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR-DMLNAFFLPDAETE 606 L L + L + P + + V L A +A+ + Sbjct: 432 LK----EELDHKRAEALREFGDMIVGLEHQFRHGEPDDAFDAVLDLTRLEAAIRAEADDQ 487 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + + L+ + +++ +G V + T+ Sbjct: 488 EVAERRMSNVLELRRWWV-IHTERGGDLTEFLQHIFLLAEKQDDD---PSGQVRLMTVHA 543 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F V ++GM +G++P + A D +R +++R L A+ A+ Sbjct: 544 AKGLEFDQVYVIGMEEGIFPHRNA-------------LDENRMEEERRLMYVAMTRARFL 590 Query: 727 LYISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 L +SY + + PS ++E + + D +E++ + A Sbjct: 591 LTLSYSLTRRRFGTIEKCAPSPFLKEPDQSVLRWVDKDADSEEAHEEAQDHMAA 644 >UniRef50_UPI000050F875 UvrD/REP helicase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F875 Length = 1061 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 106/831 (12%), Positives = 220/831 (26%), Gaps = 110/831 (13%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 PA R + ++ + + LF+S VG+P A +G G + Sbjct: 260 PAARRAEQHRWKIVLLDEFQDTSVAQLKLLRDLFHSTAVTAVGDPRQAIYGWRGASADNM 319 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSD--ILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 + F DV L + ++D IL + NR G+ + + D Sbjct: 320 IRFSSD------FHDVESLTLSTSWRNDHRILTVANRTANGLAGSRETPLSARTGAGEGD 373 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 +I + V L + P V+ ++P A Sbjct: 374 VAIDISSGAHDPDFLTVGLRSLTEWVASLPDG--SSTAVLCRKRAHFAPVAA-----ALE 426 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 + S P + ++L+ + ++ L+ + + Sbjct: 427 TAGYAVHVHGSSGLLSDPFVADLRAVLTAAVDPMAGDSLMRLIS----GRLLGLGATDIA 482 Query: 492 YLRQWVNESGIRWGIDDDNVRELEL----PATGQHTWRFGLTRMLLGYAMESAQGEW--- 544 L+ + + Q T GL ++ + S ++ Sbjct: 483 ALQSFTRRQNDSRVTEFLGEDPENSGVVPENIDQATIVEGLDELVDLFEALSGSAKFPGA 542 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 ++++ +SGL + L L L R G + + + Sbjct: 543 RAMVSNFRNSGLSELALKRLVRLAQALRHVRSGSGTIASIIRTAMTETGVDTDIWGLSDS 602 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL---AGPVNI 661 + + ++ A +VP + L+ +++ +S A ++I Sbjct: 603 LRNLHRSAIDSFLSAASQYSAADDQPSVP--GFLEWLSLMEEKDALSVAEPNSAAEAIDI 660 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ---KPKRGDRSRR--------- 709 T+ + + F V + + +P + P RGDR+ Sbjct: 661 MTVHASKGLEFDAVAVPSLVVKDFPTSPRDPEGWMERTALPYPLRGDRAHLVDYDLRTAD 720 Query: 710 ------------------------DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 +++R L A A+ L++ + N PS Sbjct: 721 FDTKKALDEWVNEFIKPAIADAHEEEERRLAYVAFTRAKHHLWLGAELMGARAN-PDEPS 779 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEAR-----VKAHLTCLHTRMPFDPQNYQPGERQ 800 + E I+ + +P + ++ + L R P Sbjct: 780 PFLMEAIEELNLDVDMPEPADESAEDRVETSVWPVPRTALVSTARRAAEWVSRAAPTGLS 839 Query: 801 SYAREWLPAASQAGKAHSEFVQPLPF---TLPETVPLETLQRFWAHPVRAFFQMRLQVNF 857 A++ P A +A +P +P+ + L + P F + L+ Sbjct: 840 ELAQKPTPVGQYARQALRISSRPEREGTGAVPDRLSATALVSWRRDPND-FMKQTLRPVP 898 Query: 858 RTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFW 917 + Q + + Sbjct: 899 SPPS-----------RAAEIGTTFHSWVEQHFGQASIDIEDEQQVR-------PIDTATI 940 Query: 918 ETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGL----LRWRPSLLS 973 E Q + + M +L ++ G + V G + W+ S L Sbjct: 941 ERLQQTF--IGSEFASRHADHIEMSFELVLGRFRVPGKIDAVFITGDHAEVVDWKTSKLP 998 Query: 974 VAQGMQLWLEHLVYCASG---------GNGESRLFLRKDGEWRFPPLAAEQ 1015 + +++ L + F+ D RF L E Sbjct: 999 EEKTLEVMKWQLALYRFAIQRVHPEITEVTGTFYFVGSDDIVRFTHLPEET 1049 >UniRef50_A5EW07 DNA helicase UvrD n=2 Tax=Dichelobacter nodosus RepID=A5EW07_DICNV Length = 664 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 54/432 (12%), Positives = 118/432 (27%), Gaps = 68/432 (15%) Query: 327 VDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD--PLDSSITFHVCHSPQR 384 D +++ Q+ + A I KR + + + Sbjct: 262 EDYPQLHIIKLEQNYRCHHKILQAANTLIAHNPHLVEKRLWSQLERGDGVCVFAARNDEA 321 Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E E + + ++ V+ F A D +PY IS + Sbjct: 322 EAERIASAIYQQKLRTQ-AAWQNFAVLYRS-----NFQARAIEQALRDVSIPYQISGGTS 375 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 H + ++ L L ++ L + +VP + +I + L L ++ + Sbjct: 376 FYEHSEIRDLLAYLRLINNPEDDAAFLRICNVP----KREIGTKTLTVLGEYAAKRQCC- 430 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 + + ++ L A + Sbjct: 431 --------------------------------------LFYAATELGLATLLSARAAMSV 452 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 + ++ P V ++ ++ E A + + +IA + Sbjct: 453 QQFCQWIEEKQKEAETALPSALLQTVIDEVAYREYIEANEAPAKAEKRWARVEELIAWLV 512 Query: 625 GAQYGDAV-PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 + + L+ L + L Q V + TL + + F V + G+ + Sbjct: 513 RLEEEERYQSLAGLMRHVL--LLDILEHQDKQKDGVQLMTLHAAKGLEFPYVYIAGVEED 570 Query: 684 VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SE 741 + P ++R L + A+ +L +SY + Sbjct: 571 LLPHHHCGES------------EEAIAEERRLLYVGMTRAKFQLTLSYAKQRRHGKNWEA 618 Query: 742 RFPSVLVQELID 753 S +QEL + Sbjct: 619 STASRFLQELPE 630 >UniRef50_A4REL5 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea RepID=A4REL5_MAGGR Length = 819 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 56/495 (11%), Positives = 136/495 (27%), Gaps = 67/495 (13%) Query: 306 LGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE----LENRAVAGVNIEEFSRS 361 + D + LL+ + V PD ++ + L E+ Sbjct: 236 VQYDLMKLLAQ----RHGRITVVGDPDQNKVALEENYRSSESILATSLKIIQQEEKRFDK 291 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA-MLEEDPTLTPRDIIVMVADIDSYSP 420 K + + +E E + L +L + D+ +++ Sbjct: 292 VLKAVHTRGTKPV-LRKLRNSAQEAEWIVAELRRTILLSGDMMNHDDVAILLRSAA---- 346 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 + SA +PY + ++ + L + ++ + +++VP Sbjct: 347 -LSRHIESALGKAGIPYRMVGGFKFYERAEIKLILDYLRVVYQPDNNDALARIINVP--- 402 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 + + ++ L + +S + + + + T R + + + G + Sbjct: 403 -KRGAGDATIKALLEEAEKS--QQSLWSLLRKHCTGGKQAKTTLRKQVEQKISGGLIR-- 457 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 L D + + S+L ++ L ++ +D N + Sbjct: 458 -------LILDIRKKMDESTAENPYSMLDVISQVLSRL-------DFEQHLKDTYNDEWE 503 Query: 601 PDAETEAAMTLIEQQWQ---AIIAEGLGAQYGDAVP----LSLLRDELAQRLDQERISQR 653 + + + E P L+ ++ D + Sbjct: 504 GRWANVQEFINLATDFMTGNEVEEELPEIDGLQQTPERDTLARFLANVSLATDVQNNDPG 563 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 V + T+ + + + VV + +G P + G D++R Sbjct: 564 QNRPMVTVSTIHAAKGLEWPVVFIPAAYNGSIPHIRSEDG----------------DEER 607 Query: 714 YLFLEALISAQQKLYISYIGRSI-QDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 L A+ A+ LY+SY + + S + + + L Sbjct: 608 RLLYVAMTRAKALLYLSYPVVGGYGNGEKVTLSSFLSGVEGHFAVQGPTFNSAVL----- 662 Query: 773 EARVKAHLTCLHTRM 787 + L Sbjct: 663 -EELARILRRKAPSQ 676 >UniRef50_B3PNG5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PNG5_MYCA5 Length = 726 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 61/439 (13%), Positives = 145/439 (33%), Gaps = 66/439 (15%) Query: 326 FVDVTPDNLLHNIQSDILE---LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSP 382 F P+ + ++ + + N A ++ +F + I F+ S Sbjct: 267 FDKDFPEAVTIKLEQNYRSTKKILNAANNLISYNKFRLDKKLFTDNEEGEDIDFYCGFSE 326 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + E + ++ + + + ++I ++ I SYS I A + Y + Sbjct: 327 EAEARKIASKISEL--KRKRVQLKNIAILFR-ISSYSRAI----EEALINENTIYKLFGS 379 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 ++ ++ L + +L +++ P I + L ++ E+ Sbjct: 380 TKFYQREEVKDALAYLRVIHDG-SEISLLRVINKPA----RRIGTSTIDKLLKFSKENN- 433 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 + L +++ E Q L E + Sbjct: 434 ----------------------------LDLFKCLDTKFNEIQKNLHI------QMETLK 459 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 +LASL+ ++ RR + + + + F + E +E I A Sbjct: 460 NLASLINEIRWARRIIQGNQIYLTLKEFMINNIKYFEEYKSSEEEYENRMENFLNLIEAI 519 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + + E+ D++ A V++ T+ + + F V ++G+++ Sbjct: 520 HVWETKHPHGTIDEYLQEITLITDRDVEDD--AASYVSLMTIHNAKGLEFDYVFVVGLSE 577 Query: 683 GVYPRQLA-------PLGFDLMSQKPKRGDR----SRRDDDRYLFLEALISAQQKLYISY 731 ++P + A + ++ + + +++R L A+ A+ KL++SY Sbjct: 578 DIFPLRRAITISPKFDFTYLPFEKEEELQKQPENIEGLEEERRLAYVAMTRARTKLFLSY 637 Query: 732 IGRSIQDNSERFPSVLVQE 750 N PS ++E Sbjct: 638 AVNRRGLNK---PSRFLKE 653 >UniRef50_Q72IS0 DNA helicase uvrD n=3 Tax=Thermus thermophilus RepID=Q72IS0_THET2 Length = 692 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 62/514 (12%), Positives = 142/514 (27%), Gaps = 94/514 (18%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 D L + R R ++ + L + VG+P + D Sbjct: 203 DEEVLRLVRKRARFIHVDEYQDTSPVQYRFTRLLAGEEANLMAVGDPDQGIYSFRAADIK 262 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLD 368 +L F P+ ++ ++ + E A A + RP+ Sbjct: 263 NILD----------FTRDYPEARVYRLEENYRSTEAILRFANAVIVKNALRLEKALRPVK 312 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + + + E + + + + V+ + Sbjct: 313 RGGEPVRLYRAEDAREEARFVAEEIARL-----GPPWDRYAVLYRTNAQ-----SRLLEQ 362 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A A R +P + ++ ++ L + + + +L+ P I Sbjct: 363 ALAGRGIPARVVGGVGFFERAEVKDLLAYARLALNPLDAVSLKRVLNTPP----RGIGPA 418 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 ++ E G W+++ Sbjct: 419 TWARVQLLAQEKG---------------------------------------LPPWEALK 439 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + E + H +L+ +L P E + + + Sbjct: 440 EAARTFP-RPEPLRHFVALVEELQDL-----VFGPAEAFFRHLLEATDYPAYLREAYPED 493 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + + ++ A+ L D + L + G V + TL + Sbjct: 494 AEDRLENVEELLRAAKEAE-----DLQDFLDRV--ALTAKAEEPAEAEGRVALMTLHNAK 546 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F VV L+G+ +G+ P + + +++R LF + AQ++LY Sbjct: 547 GLEFPVVFLVGVEEGLLPHRNSVSTL------------EGLEEERRLFYVGITRAQERLY 594 Query: 729 ISYIGRSIQDN--SERFPSVLVQELIDYIGQSHY 760 +S+ PS ++E+ + + + + Sbjct: 595 LSHAEEREVYGRREPARPSRFLEEVEEGLYEVYD 628 >UniRef50_A5UVF1 ATP-dependent DNA helicase, Rep family n=6 Tax=Chloroflexi (class) RepID=A5UVF1_ROSS1 Length = 659 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 68/526 (12%), Positives = 151/526 (28%), Gaps = 90/526 (17%) Query: 250 DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD 309 D + L+ + L + VG+ + A +G D Sbjct: 214 DACQSRWRHVLIDEYQDTDPAQHALVELLTRPSPANG-GVRSLFAVGDGMQAIYGFRNAD 272 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 + + F PD + + ++ + A + SR+ L Sbjct: 273 H----------TIISRFERDFPDARVIELATNYRSRQPILDAAYAVIRHSRTVQPMALRA 322 Query: 370 LDSS----------ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 + + E E + + +L + P++I V+ Sbjct: 323 TKPETPRGVGYTSPLQIVDAKDARDEAERVARSIADLLRQ--GRRPQEIAVLYRSR---- 376 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + F SA +PYA+ V+ ++ L + ++ + + + +VP Sbjct: 377 -HMSRAFESALRHARIPYALRGATGFFDRAVVRDALAYLRVINNPADTLSLNRIANVPP- 434 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + L L + + G + L A+ Sbjct: 435 ---RGLGANSLVTLSAFAGQRG-----------------------------LTLADALIH 462 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 + E + +A L+ L L+ + L + L Sbjct: 463 PEALALLPSKAAEGARQLAALLTRWRRLAES------ALSPDHLLADVLERTGYQAWLEQ 516 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 + E Q+ A+ L+ E+A + + V Sbjct: 517 RLEPENVPDARAHLQELANAAAD--------HTALNAFLQEVALLTSADDNDEE--RDRV 566 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 + T+ + + + +V ++G+ +GV P + + D++R L A Sbjct: 567 QLSTIHAAKGLEWPIVFVVGLEEGVLPHEHS------------LVTPEGVDEERRLCYVA 614 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE 765 L A ++LY+S+ ++ PS + ++ Y + + + Sbjct: 615 LTRAGEQLYLSWAASRVR-GKLAKPSRFLNDIEAYGRERARVKVER 659 >UniRef50_C7MVN2 DNA/RNA helicase, superfamily I n=5 Tax=Actinomycetales RepID=C7MVN2_SACVD Length = 1066 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 109/822 (13%), Positives = 205/822 (24%), Gaps = 119/822 (14%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ-DVGNPLLASWGKLGRDYI 311 DP LA R R +D + L + + G+P + + G D Sbjct: 243 DPELLAGEQARVRHLFVDDAQHLDPLQYRLVRLLAETASDAVLAGDPDQSVFSFRGAD-P 301 Query: 312 YLLSDLESS--QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 L +D + + + D ++H I A + Sbjct: 302 RLFADADPDGDRTVVLTRSHRLDPVVHEAVGRI-----AATLPGTSAHRASVPTPTRGRE 356 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + + +P E + D+L D + + V++ + P V A Sbjct: 357 GRGKVRTRLSPTPAAEAAWIADQLRRAHLLD-GVPWSQMAVLMRSVSRSLP----VLQRA 411 Query: 430 PADRYLPY-AISDRRARQSHPVLEAFISLLSLPDSR--FVSEDVLALLDVPVLAARFDIT 486 +P A+++ P + +++L +E LL P+ Sbjct: 412 LTMAGIPVAAVTEELPLARQPAVRPLLTVLWAAADPRVLDAETAEMLLSSPL-------- 463 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 G D +R L G S + ++ Sbjct: 464 -----------------GGADPLALRRLRRGLRRLELVAGGER--------SSDELLVEA 498 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC-------RDMLNAFF 599 + D +GL + + L + R + +E+ L ++ Sbjct: 499 LRDGDVLAGLADAEAAPVRRVSRLLTVAREAMRSGAGVEDVLWQVWQASGLQDRLVAQAA 558 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR--LDQERISQRFLAG 657 A ++ A + + L+ + Sbjct: 559 KGGTLGMRADRDLDAVVALFDAARRYVDRLPKAGVLGFVEYLSSQHIAGDSLAPVAVRGS 618 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP-------------LGFDLMSQKPKRG 704 V++ T + VV +LG+ +G++P G D + Sbjct: 619 GVSLLTAHGAVGREWSVVAILGLQEGMWPDLRLRGSVLGVERLVDLLSGVDDDAVATVSA 678 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 ++R LF A A+ L +S + + PS +L+D + G Sbjct: 679 TAPLLAEERRLFYVAASRARHTLLVSAVQ-----GEDEQPSRFFFDLVDAGVDTERGGGP 733 Query: 765 EALNCDESEARVKAHLTCLHTRMPFD------PQNYQPGERQSYAREWLPAA--SQAGKA 816 + A L D + + AR+ +P A Q Sbjct: 734 DVRLVARERGLTLAELVGELRAAVTDTELEPRRRKLAARQLARLARDGVPGAHPEQWYGL 793 Query: 817 HSEFVQPLPFTLPE--TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 E V + P+R + + + Sbjct: 794 AGNSSDRPLREPDEVIRVSPSVVDTLVKCPLRWLLERHGGTDPAQLSAVT---------- 843 Query: 875 LSRYQINQQLLNALVEQDDAERL---FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV 931 + L A E D + L A D F ++ + Sbjct: 844 ---GTLVHALAQAAAEGTDEQTLWKELDEAWAKVDAGAPWFSRKERVRVEGMVRSFLTWL 900 Query: 932 IACRQPG------QSMEIDLACNG----VQITGWLPQVQPDGLLRWRPSLLS------VA 975 R Q M + L V +TG + +++ D R L Sbjct: 901 RQSRDELTQHAVEQDMRVSLPEAEGEPSVALTGRVDRLELDAEGRPVVIDLKTSKSPVAK 960 Query: 976 QGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQAL 1017 + VY + G G R + A Sbjct: 961 DAAAEHPQLAVYQLATLLGAFSGHKGHTGGARLLYVGKPNAK 1002 >UniRef50_A1W088 ATP-dependent DNA helicase, UvrD/REP family n=30 Tax=Epsilonproteobacteria RepID=A1W088_CAMJJ Length = 691 Score = 182 bits (461), Expect = 8e-44, Method: Composition-based stats. Identities = 48/430 (11%), Positives = 125/430 (29%), Gaps = 78/430 (18%) Query: 326 FVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLD--SSITFHVCHSP 382 F + + L ++ + + A I + K + D +I + Sbjct: 269 FQNDFKNVKLVKLEQNYRSVGTILQAANNLISHNEQRLGKTLICTKDTGENIKILKNENE 328 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + E + + +L + + ++I ++ + A + + Y + Sbjct: 329 KDEGLYIAQEVKKLL--NSGVEAKEIAILFR-----VNALSRAIEEAFMKKQISYKLLSG 381 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 ++ IS L L + +++ P + I E+ L+ L ++ + I Sbjct: 382 MRFYERLEIKDLISYLRLILNPSDDLSFKRIINRP----KRSIGEKALKNLEEYAKKRQI 437 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 D + + + A A Q++ + Sbjct: 438 SL-FDALCESDGGVGI------------LTTKKAQNEANIFIQNIHTL-----KSYDNAK 479 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 + + +L + +++ +E + + + ++ + Sbjct: 480 KVFDNIEELFKIKDYFSEQDDGDERIRNLDEFY--------------ANLREKLKE---- 521 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 L L E++ DQ+ + + V + ++ + + F V ++G ++ Sbjct: 522 ------DPEASLEDLLSEISLLSDQDNLDEE----CVCLMSIHASKGLEFDYVFIIGFDE 571 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE- 741 G +P + A+ A++ L IS S Sbjct: 572 GFFPLNSEENLEEERRL----------------AYVAITRAKKLLTISVANSRFYHGSRA 615 Query: 742 -RFPSVLVQE 750 PS ++E Sbjct: 616 NINPSRFLEE 625 >UniRef50_P45612 Probable DNA helicase II homolog n=4 Tax=Mollicutes RepID=UVRD_MYCCT Length = 722 Score = 182 bits (461), Expect = 8e-44, Method: Composition-based stats. Identities = 50/422 (11%), Positives = 130/422 (30%), Gaps = 78/422 (18%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 IL++ N + +F + + C+S E + ++ ++++ Sbjct: 294 ILDISNSFIKNN---KFREHKEIFTNNKSGKKVVLKECNSKTSEASYVSSKIKELVKQ-- 348 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 +DI ++ F A++ +P+ + + V++ ++ L + Sbjct: 349 GYHYKDIFILYRMNAW-----SQEFEKELANKKIPFQLIGGIKFRERKVIKDAMAFLKMI 403 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 + +L ++ I + + + +++ +L Sbjct: 404 SIKDNLSS-QRVL--GLIPK---IGNITIEKIIN---------TANLNHLNIFDLITNED 448 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 T +T +L L+ + Sbjct: 449 KTLLHSIT--------------------------------KNLDELIEVFKTAHQLYLDN 476 Query: 582 RPLEEWLPVC--RDMLNAFFL--PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 +EE L + + + + + Q + + Y + + L Sbjct: 477 TNIEEILKYLLIQSGYENKLKIRKEQDDLENINALYDQLKRFDEDFDPKYYSEE---NKL 533 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 L + I + V++ T+ + + KVV + G+N G++P +++ + Sbjct: 534 IAFLQEEALTSDIDEAEQIDKVSLLTVHAAKGLENKVVFITGLNQGIFPSRISETSIN-- 591 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD--NSERFPSVLVQELIDYI 755 +++R AL A+ +L+++Y+ SE PS + EL + Sbjct: 592 ----------ELEEERRALYVALTRAKDELFLTYVKGDYSHIMQSELKPSKFIHELDKDL 641 Query: 756 GQ 757 + Sbjct: 642 YE 643 >UniRef50_B0KVA6 Putative UvrD/REP helicase n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVA6_9BACT Length = 710 Score = 182 bits (461), Expect = 8e-44, Method: Composition-based stats. Identities = 69/519 (13%), Positives = 167/519 (32%), Gaps = 81/519 (15%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYI 311 P LA+ + + ++ + + E LF + ++ LL G + Sbjct: 219 VRPNILAEYKNQFKHILVDEFQDTNYAQYELIKLLFPTKETKESERSLLVV-GDDSQSIY 277 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNI------QSDILELENRAVAGVNIEEFSRSD--- 362 + + F++ D+ + + +IL+ + + N + Sbjct: 278 KF--RGAAVSNILQFMEDYKDSKMITLLKNYRSTQEILDAAYKLIQNNNPDTLESKLGIS 335 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 K S+ + + EVE++ ++L +L ++P T +D ++ + P Sbjct: 336 KKLIGINSGSNPKILQTETLEDEVELVISKILEILAKEPQYTYKDFAILARANNHLDP-- 393 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 F A LPY + R + ++ L + + ++ +L++ L Sbjct: 394 ---FVMALRKYGLPYQLVGNRGLYDRDEVRDILAFLRVIINTQDGINLYRVLNIESL--- 447 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 +I + + L L + Sbjct: 448 -EIPYKEISEL---------------------------------------LSKSRYEKTD 467 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFL 600 W+ V + +A L+ + +++ + + P E V + LN F Sbjct: 468 LWEQVKKSKD---------EKVAFLVKTIEGFQKNITKNTPTEMVFEVVNSTNYLNQFLE 518 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDA------VPLSLLRDELAQRLDQERISQRF 654 + + + + + + V L D + + + ++ Sbjct: 519 EETIENELCIKNLNLFLQRVQKFEVDYHNETGEMPTVVNLVDYLDMIIEAGENPAQAEIE 578 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR---SRRDD 711 +N+ T+ + + F VV ++ + G +P + ++ + K + Sbjct: 579 DIDTINLMTVHSSKGLEFPVVFMVNLVSGRFPTRNQGDTIEVPEELIKETLPTGNEHIQE 638 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 +R LF + AQ+ L+++ G++ + PS +QE Sbjct: 639 ERRLFYVGMTRAQKYLFMTL-GKNYGGKRDTIPSGYLQE 676 >UniRef50_Q8D2T2 UvrD protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D2T2_WIGBR Length = 719 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 48/451 (10%), Positives = 124/451 (27%), Gaps = 68/451 (15%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSP 382 F++ + +Q + N A ++ IT + ++ Sbjct: 267 FINDFSRTKIIKLQQNYRSTNNILQAANSLIMNNNLRIGKKLWTEKKSGDLITIYQAYNE 326 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + E + +L ++ ++ ++ L Y I Sbjct: 327 KDESNFIIKYILNNQKKLNNKK-KEYAILYRKNSQSRSL-----EENLLKNNLKYDIYGG 380 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 S ++ ++ L ++ +++ P + I E+ L Sbjct: 381 LKFFSRQEIKNTLAYFRLIVNKKDDLSYERIINFP----KRKIGEKTL------------ 424 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 + W + + + + + Sbjct: 425 -------KKIKNISKNKKLSLWEST------------------NFFIKNNLNDAKSFSLK 459 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 + L+ L + L+ + +LN + + Q+ + Sbjct: 460 NFFYLIDYLKENIKNLSLHEKFNFVIKK-SGLLNFYEKEKKNINNSRIDNWQELVNSAKQ 518 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PVNICTLMPMRSIPFKVVCLLGMN 681 + L L+ ER + + + TL + + F +V ++GM Sbjct: 519 FFIENNKEKNILEKFLAF--STLESERYTSYDDENYKIKLMTLHSSKGLEFPIVFIIGME 576 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS- 740 +G++P + + + +++R L + A +KL I+Y+ Sbjct: 577 EGLFPNIIYSNN------------KEKLEEERRLAYVGMTRAMKKLVITYVKYRNIYGKI 624 Query: 741 -ERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 +R PS ++E+ + + Y + Sbjct: 625 IKREPSRFIEEIPSHYKKIIYENKTNTSKNE 655 >UniRef50_B4UKQ6 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID=B4UKQ6_ANASK Length = 797 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 86/586 (14%), Positives = 152/586 (25%), Gaps = 90/586 (15%) Query: 222 VYLQALQALGKHIEIHL--LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 VY + QAL + + L P R D A A+ R R ++ + Sbjct: 181 VYHRYEQALARAGAVDFGDLLLRPVRLLEEDA---ALRARWAGRFRYLLVDEFQDTNPVQ 237 Query: 280 SENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNI 338 L VG+ A + G D +L F P + + Sbjct: 238 YRLLQLLTGPRRNVCVVGDDDQAIYRWRGADVSNIL----------GFDGDFPGTKVVKL 287 Query: 339 QSDILELE---NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA 395 + + + A A ++ R + + V E E + + A Sbjct: 288 EQNYRSTRTILDAAHAVISRARRRREKRLWTESGAGAPLALLVGEDEHAEAERIARAVAA 347 Query: 396 MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 E + +I V+ P +A +PY I + + Sbjct: 348 --ERGRGTSGDEIAVLYRTNAQSRPL-----EAAMRAARIPYVIVRGTSFYERAEVRDAA 400 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 + L L S D+ +++ P I + + LR G Sbjct: 401 AYLRLALSPASDLDLERVVNRPP----RGIGGKTVERLRAHAAARG-------------- 442 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 ++V D + L LA + Sbjct: 443 -------------------------LPLVEAVAERDAVAELKPAARRALAEFHALVTGLA 477 Query: 576 RGLAQERPLEEWLPVCRD--MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 + V + ML+ + + A E + G+ P Sbjct: 478 ADVPALDAGVAVQEVLKRSGMLSRLEEEHTDEAVERAENLAELVAAAREFDESIAGEPPP 537 Query: 634 -------LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 L L Q G V + TL + + F+ V L GM DG P Sbjct: 538 GDPEEVRPPPLARFLEQIALLGEADAATPEGRVALMTLHAAKGLEFEAVFLAGMEDGTLP 597 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS------ 740 + + + D++R L + A+++L IS R I Sbjct: 598 YER------PWADQTSSERDESLDEERRLCYVGMTRAKRRLTISLARRRIGYGENGPSYR 651 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 PS +++L + A ++ + Sbjct: 652 NMEPSRFLRDLPPELFGDAVAREVRAREAAQAAPVARPPTIRRLPG 697 >UniRef50_C8S459 UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S459_9RHOB Length = 850 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 65/498 (13%), Positives = 140/498 (28%), Gaps = 76/498 (15%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL---ELENRAVAGVNIE 356 + +G G + +L F P + ++ + + A A + Sbjct: 274 QSIYGWRGAEVGNILR----------FEKDFPGAHVVRLEQNYRSTPHILAAASAVIAAN 323 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP---RDIIVMVA 413 + + + E + D L A+ + P D+ ++V Sbjct: 324 KGRLGKTLWTEREAGEKVRLIGHWDGEEEARWIGDELEALQRGTRAMDPHSLDDMAILVR 383 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 + F LPY + + ++ L S + Sbjct: 384 -----ASHQMRAFEDRFLTIGLPYRVIGGPRFYERLEIRDAMAYFRLAVSPADDLAFERV 438 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGI-----------RWGIDDDNVRELELPATGQH 522 ++ P + + + + +++ +G+ + GI +L T Sbjct: 439 VNTP----KRGLGDTAQQNIQRRARAAGVSLLGGARELLAQGGIGGKGANQLRTFVTSCD 494 Query: 523 TWR-FGLTRMLLGYAMESAQGEW-------------QSVLPYDESSGLIAELVGHLASLL 568 W F R A + + + DE+ + + + + Sbjct: 495 AWHYFVANRGNELEIKRYADQLFVLREERSRLLRELELLDENDEARESVEREIVICGARI 554 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD--AETEAAMTLIEQQWQAIIAEGLGA 626 + L L + A + D E + +++ +A+ Sbjct: 555 GRCERDIAILDGNHVLLAEQILEESGYTAMWQADKTPEAPGRLENLKELVKAL------- 607 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 L + ++ ++ E A V+I TL + + F VV L G DG++P Sbjct: 608 --EQFENLQGFLEHVSLIMENES---EEAAEKVSIMTLHAAKGLEFPVVFLPGWEDGLFP 662 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFP 744 Q + L +++R L + A+ IS+ P Sbjct: 663 SQRSMDESGLKG----------VEEERRLAYVGITRAEALCTISFAANRRVYGQWQSALP 712 Query: 745 SVLVQELIDYIGQSHYLP 762 S + EL + + P Sbjct: 713 SRFIDELPEAHVEVLTPP 730 >UniRef50_D0LEA1 UvrD/REP helicase n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LEA1_GORB4 Length = 1119 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 109/843 (12%), Positives = 205/843 (24%), Gaps = 139/843 (16%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 + + + + L VG+P+ + +G G Sbjct: 268 VAAERKAFRAVLLDEYQDTGHSQRVLLSTLFGGTSRDAPVAVTAVGDPIQSIYGWRGASA 327 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDI-LELENRAVAGVNIEEFSRSDNKRPLDP 369 L D + L +++ L L N A + S + D Sbjct: 328 ANLPRFAGDFPAADGSPADRRELLTSWRNAEVVLRLANHVSAELRRRGIPVSVLRARPDA 387 Query: 370 LDSSITFHVCHSPQREVEVLHDRL--LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 S + + E E + D + E+ P ++V + +P Sbjct: 388 PSGSAHIALTETVVDEREWIADAIETRWRAAENDGQAPPTTAILVRRNEDSAPLAAE--- 444 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 R +P + P + +S L L + LL AR+ + Sbjct: 445 --LERRGIPAEVVGIGGLLHVPEVTDVVSTLRLMADPMAGTAAMRLL----TGARWRLGA 498 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L L + E + + + T + L +L + G +V Sbjct: 499 ADLAALWRRAAE------LAAEEIAAAGGAVTSREQLDAALDAVLPTEVV-DRAGIADAV 551 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP--LEEWLPVCRDMLNAFFLPDA-E 604 + + S + + + QL RR + Q P + + + A Sbjct: 552 VDPGDPSRYSPDGYARIRAFGAQLESLRRRIGQPLPELVADVENTIGVGVEAQIRARRMR 611 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP-VNICT 663 + + + D L + + +A V I T Sbjct: 612 GAITGREHLDAFAEYVTRYADRRGADLPGLLAFLETAETIEKGLEPGRIEVAEQRVQILT 671 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF----------------------------- 694 + + + + VV + + ++P A + Sbjct: 672 VHAAKGLEWDVVAIPHLCHNIFPGGKAETTWLGSARELPGELRGDLAIAAEQGSAHPEGY 731 Query: 695 ---------------DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 D ++ + R ++DR L AL A+ L IS S + Sbjct: 732 PVLDLHAVTDRKELEDTIATYKEAIADRRLEEDRRLLYVALTRARHDLLISAHHWSESGD 791 Query: 740 SERFPSVLVQELIDYIGQSHYLPGDEA--------LNCDESEARVKAHLTCLHTRMPFDP 791 R S EL+ I + P E+ + A L P DP Sbjct: 792 KPRGGSEFFTELLTAISDAVDDPTVESGGLVVDVLAPEPDDGAPNPLAERVLAAPWPADP 851 Query: 792 QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF------------------------- 826 + ++ A L + P Sbjct: 852 LAGRRDGVRAAADLVLAEIAARDAPALFDTDGAPESDGDPDLSDEIAAWEAEVSALLVER 911 Query: 827 ----------TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS 876 LP + + L A RL+ PF + Sbjct: 912 EASNQALVEVELPTHLSVSQLVELDADEAEF--ARRLR-----------RPTPFRPNPTA 958 Query: 877 -RYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ--LADRVIA 933 R + R +LP A + ++ LA Sbjct: 959 RRGTAFHAWVERWFGA-------TRLLDIDELPGAADATATPDADLDALRDAFLASPWAN 1011 Query: 934 CRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSL------LSVAQGMQLWLEHLVY 987 + + G+ + G + V D W A+ L+++ Y Sbjct: 1012 RSPSEVEVPFETVIAGIVVRGRIDAVFADPDGGWTVIDWKTGVVPEPARRESLFIQLAAY 1071 Query: 988 CAS 990 + Sbjct: 1072 RIA 1074 >UniRef50_B0DAK6 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0DAK6_LACBS Length = 1055 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 59/493 (11%), Positives = 145/493 (29%), Gaps = 56/493 (11%) Query: 265 RRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELD 324 R ++ + + L + VG+P + +G + LS + Sbjct: 257 RHILVDEFQDTNITQYKLMRALAIARCVTIVGDPDQSIYGWRSAEVGN-LSKMRRD---- 311 Query: 325 AFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR 384 T LL + ++A ++ ++ + P + + + Sbjct: 312 --FPDTEQVLLEENYRSTAAILKASLAIISQDKSRIQKSLHTSHPNGFTPVLYQVQTEHE 369 Query: 385 EVEVLHDRLLAMLEEDPT-LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 E + + ++ L D ++++ + V +A +P + Sbjct: 370 EAAFIAIEMKRLVAHMGGALNWGDFVILLR-----FNALSRVIETALQKEGIPSRVLGGH 424 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 ++ ++ L + D+ ++VP I E+ + L +S Sbjct: 425 KFFERLEVKDLLAYLQVVDNPNFVPAFKRAVNVP----GRGIGEKTVAELIGRAEKSNQS 480 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 + + + + P + R + + +S+ +S A+LV Sbjct: 481 PLAIVEAICDNKAPDIKP-----AVKRKVAPFVTA-----IRSLRAQAHNSSSPADLVRK 530 Query: 564 LASLLMQLNIWRRGLAQERP-LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L L+ + L + + E ++++ F + E + Sbjct: 531 LVDLI----KYEDHLKKTQSDWESRWENVKELIT--FASEMEAQNQAEEAADAVAG---- 580 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 G + PL + + S+ V I T + + + VV + ++ Sbjct: 581 GDNSIEMSTTPLRQFLQASMLSSEGDNQSEEGNKDKVTISTCHSAKGLEWPVVMIPSVDQ 640 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 +P + ++R L A AQ LY+S + + Sbjct: 641 NTFPFYRSEDT----------------AEERRLLYVACTRAQSLLYVSRATTRMVAGETK 684 Query: 743 FP--SVLVQELID 753 S + +++ Sbjct: 685 SKELSEFISSVLN 697 >UniRef50_B2A098 UvrD/REP helicase n=3 Tax=Verrucomicrobia RepID=B2A098_OPITP Length = 668 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 65/528 (12%), Positives = 150/528 (28%), Gaps = 88/528 (16%) Query: 246 YYWGD--IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASW 303 +W + IK P R R ++ + ++ +L VG+ + Sbjct: 213 EFWLELLIKAPEVAQYFAHRFRHVLVDEYQDTNTLQAQIVDRLAAHHCVMAVGDDAQCIY 272 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQ------SDILELENRAVAGVNIEE 357 G ++ + + F D P +H I+ +IL N + Sbjct: 273 SWRGANF----------ENIMTFPDRHPGTAIHRIETNYRSTPEILNFANGVLLAQPKGR 322 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + + + + E + R+ A++ ED ++ ++ ++ Sbjct: 323 HFDKELRAARGHAQKPF-VVQAMDDREQAEFILKRIRALV-EDEGVSLNEVAILYRS--- 377 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 F+ A + +PY I+ + ++LL + ++ + Sbjct: 378 --HFLALEVQLALSRAGVPYQITSGVKFFERQHIRDLVALLRFVYNGADTQAWQRI---- 431 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 I E+G + + + A Sbjct: 432 -AVLLPKIGEKGAQKIYAAAVDH-----------------------------------AR 455 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + + + D S + + AS L+ + RP + Sbjct: 456 LTQKNLLDVLNTDDVRSKVAKDARDDWASFCASLSEVAEKMQHARPADAVATAIEGWYGD 515 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 + + Q L + + A Sbjct: 516 YLKGQYADYLDRLDELKALVGFAQRFEETQ-------DFLAQIVLLNSETSDRHVDPEAE 568 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V + T+ + + + VV ++G+ DG +P + + D+ +++R LF Sbjct: 569 AVRLTTVHQAKGLEYDVVFVIGLADGQFPGRRSIESGDV-------------EEERRLFY 615 Query: 718 EALISAQQKLYISYIGRSIQDNSE---RFPSVLVQELIDYIGQSHYLP 762 A+ A+ +LY+SY + + PS + E+ + + + Sbjct: 616 VAVTRARNELYLSYPKVATRGGPGGMLLTPSRFLLEVPTDLYEPLRIK 663 >UniRef50_B2S4R5 DNA helicase II n=3 Tax=Treponema RepID=B2S4R5_TREPS Length = 670 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 67/521 (12%), Positives = 147/521 (28%), Gaps = 62/521 (11%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG-NPLLASWGKLGRD 309 I P L + ++ + + +++ + G + L G + Sbjct: 198 IMLPVQLLREHQDVAEQLHARWQVVMVDEYQDSNVAQFHFLQVLTGAHTYLCVVGDDDQS 257 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLD 368 + + F + + + ++ + + VA +++ K + Sbjct: 258 IYRF--RGAEVKNILTFPEFFQNTQIIRLEYNYRSTDAILRVADSVVKKNQDRLGKALIA 315 Query: 369 PLDSSI--TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 + ++ E + + + D ++ F Sbjct: 316 QRTGGTKPRLFLLNNQDEEAALCVHLIQE--ARARGIPYADWAILYRVNAQSLS-----F 368 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 +PY I S ++ ++ L L + + +L+ P I Sbjct: 369 EQCFLRNRIPYRIVGTLKFYSRAEVKDVLAFLQLIVNGSDELALRRVLNKPP----RGIG 424 Query: 487 EEGLRYLRQWVNESGIR--WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 E+ L ++ I + ++ L A + + L R L ++ Sbjct: 425 EKTQDALFVCAQQAAITDFTTLQSTHLTALGTRARQKVSSFLSLLRALRARMPQAPAAGE 484 Query: 545 QSV--LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 ++ P +E LA + + LEEW Sbjct: 485 EARTSAPPEEPVEERTHDAEGLARFVSVVMEH-------TGLEEWYRQ------------ 525 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNIC 662 + E T Q ++ L + + +LDQ + A V++ Sbjct: 526 -KDEEEGTQCAVNVQELMNAASLYACSHE-GLVSFLEHI--QLDQNMADEGGAADAVHLI 581 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 T+ + + F+ V L G+ +GV+PR D + ++R L A Sbjct: 582 TIHNTKGLEFRRVILTGLENGVFPR----------------DDEADIQEERRLMYVACTR 625 Query: 723 AQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYL 761 A LY++ PS + EL + + Sbjct: 626 AMDSLYLTACAYRRMWGRHTAMKPSRFLTELDSALLEITDP 666 >UniRef50_C4R3W4 DNA helicase and DNA-dependent ATPase n=1 Tax=Pichia pastoris GS115 RepID=C4R3W4_PICPG Length = 802 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 66/462 (14%), Positives = 139/462 (30%), Gaps = 46/462 (9%) Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 ++ ++ ++ QE+ + + + N I+ + + S + Sbjct: 296 NFENMIIHYQNCQEITLKENYRSTSNILNFSEQIMTQQKDRKQKSLRSQISHLNIP---- 351 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAM-LEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 I + + +E + + + + L + DI +++ F V Sbjct: 352 -----IVYVRTQNTFKEADHIASEVAKLGLMSGLLTSYNDIAILLRS-----SFQSRVIE 401 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + +PY + RA + + L + + +L L+ P + Sbjct: 402 QSLVTNRIPYEVVHGRAFWELKEIRVAMDYLRAIVNNSDNLAILRTLNFPP----RGVGN 457 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + L+ L + +++S I+ + + + R + E + + Sbjct: 458 KTLQRLEELIDKSDCP-VIETLEMAIHDKKNGFLNVKSESGVRQYIDILKECGRLLDSTS 516 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 L + S + + LA+L ++ E L + LN F E + Sbjct: 517 LDCEASLEACFDQIVQLANL-KEIKKTPETSKGTHDSENALKAVEENLNEFKRQLIEYKP 575 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF-----LAGPVNIC 662 + I + + +D S G V I Sbjct: 576 IIDQI----------ITAEAGDTPLTTRDVLSSFLDSIDLYETSNNENKKDSKKGRVTIS 625 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 T+ + + + VV + G DGV P + S + D+DR F AL Sbjct: 626 TIHGAKGLEWPVVFIPGCTDGVIPSKWTLEDDGPDS-------STNLDEDRRCFYVALTR 678 Query: 723 AQQKLYI-SYIGRSI--QDNSERFPSVLVQELIDYIGQSHYL 761 A+ LY+ SY RS S ++ + Sbjct: 679 AKSMLYLSSYKERSTPWSGEESNEVSCFLKPTLKMFQNQLVT 720 >UniRef50_UPI0001B56A46 ATP-dependent DNA helicase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B56A46 Length = 1057 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 84/722 (11%), Positives = 186/722 (25%), Gaps = 109/722 (15%) Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 P + + +P E + D+L D + ++ V+V Sbjct: 343 PHRKLVTPPGKRGGKVRVRLMPTPAAEASWIADQLRRAHLVD-GVPWSEMAVLVRSPA-- 399 Query: 419 SPFIQAVFGSAPADRYLPY-AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 F+ V A +P + ++ H + +++L + LL Sbjct: 400 RTFL--VLQRALRAAGVPIGSATEELPLAKHSAVRPLLAVLRIAAEP-------ELL--- 447 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + ++ S L + LL A+ Sbjct: 448 -----------DVDIAEMLLSSSLGGADPLALRRLRRGLRRLELAGGGQRSSDELLVEAL 496 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + L+ + + + L + +++ Sbjct: 497 RGGDILVGLADNEALPVRRVGNLLSITHQAVSRGEGVEQVLWELWQASGLQERLLRLVDR 556 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR--LDQERISQRFL 655 A+ + + + + + G A ++ D L+ + Sbjct: 557 GGSLGAQADRDLDAVVALFDS---AGRYADRLPKASVAAFADYLSSQNIAGDTLAPAAIP 613 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF-------DLMSQKPKRGDRSR 708 V++ T + VV + G+ +G +P DL+S + S Sbjct: 614 GEGVSLLTAHASAGREWTVVAVAGVQEGAWPDLRLRGSLLGVERLVDLLSGVDEHDKVSA 673 Query: 709 ----RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 ++R LF A A++ L ++ + + PS + +L + L Sbjct: 674 IAPILAEERRLFYLAASRARRTLLVTAVA-----GEDEQPSRFLDDLEENGADDGMLDSR 728 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 + V A L + D + +++ + AA+ AH + L Sbjct: 729 MKP---PGRSLVLAELVGELREVVCDDKADPERRKRAAKQLARLAAAGVPGAHPDTWYGL 785 Query: 825 PFTLPE----------TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 P E + T++ P+R + + Sbjct: 786 PEASTEDPVHGPGDLMRISPSTVEILVKCPLRWLIERHGGSDPAQL-------------A 832 Query: 875 LSRYQINQQLLNALVEQDDAERL---FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV 931 + L A+ E++ D F Q ++ + Sbjct: 833 AVTGTLVHGLAQAIAGGSTEEQIQAALDEAWVRVDAGAPWFSRRERSRVEQMLRNFVSWL 892 Query: 932 IACRQPGQS------MEIDLACN----GVQITGWLPQVQPDGLLRWRPSLLSVAQGM--- 978 RQ +E++L V + G + +V+ D R + + Sbjct: 893 EKSRQELIEAGVEQDIEVELPMGDEEVRVLLRGRVDRVEMDKDGRPVIVDIKTGKVPVSG 952 Query: 979 ---QLWLEHLVYCAS------------GGNGESRLFLRKDGEWRF----PPLAAEQALHY 1019 + + Y + GG + + PP+ + + Sbjct: 953 ADAEKHPQLAAYQLAVLLGAVEGKNTPGGAKLVYVAKGNNKTGATQRDQPPMDEDNGREW 1012 Query: 1020 LS 1021 L Sbjct: 1013 LE 1014 >UniRef50_C8WI10 UvrD/REP helicase n=3 Tax=Bacteria RepID=C8WI10_EGGLE Length = 753 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 78/587 (13%), Positives = 161/587 (27%), Gaps = 90/587 (15%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDY 310 ++P K R ++ + E L VG+P + G D Sbjct: 244 QNPDIRLKWQKRLEYIMVDEFQDIDGLQHELMEVLAGYHKNLFVVGDPDQTIYTWRGADV 303 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 YLL F P + + ++ E +R + L + Sbjct: 304 RYLLD----------FDKRFPGTRTVMMLENYRSAPRVVAVANSLIEKNRERVPKRLAAM 353 Query: 371 DSSIT----FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 S+ + SP E + LA+ + RD+ V+ + + Sbjct: 354 -RSVHGPTVWRHAKSPDGEAAWIAQGALALH--GEGVAYRDMAVLYR-----AHYASRPV 405 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 A +P+A+ ++ +S L L D + + P + ++ Sbjct: 406 EEALLRAEVPHAVYSGVPFFGRREIKDALSYLRLVAY-QDDLDFARVANAP----KRNLG 460 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + +LR+ +E G + L R + + Sbjct: 461 ARRMAFLREKADELGC--------------------SLFEALERFVDDDLFK-------- 492 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 LL ++ +R E V + L ++ Sbjct: 493 --------------RTKARQLLQLVDRFRSSYEGRPVSEVLAAVLSESGYERALRTEGSQ 538 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + + + Q++ G+ V L L + V + T+ Sbjct: 539 ERLDNLAELKQSVYEF--ETTCGEEVTLEHYLAH--TALLTNADAMDDAQDKVRLMTVHA 594 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F V L M +GV P + +++R L A+ A+ Sbjct: 595 AKGLEFAHVFLCSMTEGVLPSRKTDTP-------------QGMEEERRLAFVAMTRARDG 641 Query: 727 LYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 LY++ + + R+PS + ++ + P + L+ + + R Sbjct: 642 LYLTEAEGRGHEGAPRYPSRFLLDIDPAALEFSNKPAERELDDARAAYALADRWIADLVR 701 Query: 787 MPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP 833 D + A + + + V P T+ Sbjct: 702 ---DARFAVGDRVTHAAFGSGRVLAVDSQKRAYEVAFDDLDTPRTIS 745 >UniRef50_Q67LG5 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67LG5_SYMTH Length = 671 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 66/442 (14%), Positives = 122/442 (27%), Gaps = 74/442 (16%) Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSI 374 +D+ E + LL + A + R P + Sbjct: 281 ADIRCILEFERHFPGARTILLEQNYRSTGAIIRAANRLIAHNAGQRPKRLFTAAPEGRPV 340 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 H + E + + R+ A + D ++ P F + Sbjct: 341 VAHEAETEVDEAKWVVQRIRA--GAEAGRRWGDFAILYRTTAQGRP-----FEEELREAS 393 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +PY + ++ ++ L L + S + +L+ P R I E GL+ L Sbjct: 394 IPYQVVGGPRFYDRREVQDSLAYLRLVHNPRDSVSLERVLNAP----RRGIGERGLQRLL 449 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + G+ ++ + Sbjct: 450 ALAAQRGV---------------------------------------DLIAALRVAADEG 470 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQE----RPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 L E L L R L ++ E L L D E + Sbjct: 471 VLQDEAAAGARQLHDHLRRAREALERQPGRFAAAMERLLRESGYLAYLQEEDRRKEERRS 530 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 + + A + E L D LA QE S V + T+ + + Sbjct: 531 EVVESLIAAMHEFERRSPDG--GLGAYLDHLALLEGQEDES---GGDVVKLQTIHSAKGL 585 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 + VV ++GM G+ P + + +++R L A+ A+++LY++ Sbjct: 586 EYPVVFVVGMEQGLLP-------------YQRALEEGNLEEERRLCYVAITRAREELYLT 632 Query: 731 YIGRSIQDNSERF--PSVLVQE 750 Q PS + E Sbjct: 633 GARVRWQRGEMVLTTPSQFLSE 654 >UniRef50_UPI000023F08A hypothetical protein FG08405.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023F08A Length = 1060 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 63/471 (13%), Positives = 136/471 (28%), Gaps = 70/471 (14%) Query: 295 VGNPLLASWGKLGRD---YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 VG+P + +G + LL + ++ E+ + IL++ + Sbjct: 245 VGDPDQSIYGWRSAEVKNLFRLLREYPNTDEISLEENYRSS-------QSILDVSLTVIQ 297 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE-DPTLTPRDIIV 410 S E E + + + L D+ + Sbjct: 298 QDTKRYKKVLLPVHTKGARP---VLRSLKSSSAEGEWIVSEIKRAVMMFGDMLKFEDVAI 354 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 ++ + SA + Y + ++ I L + ++ + Sbjct: 355 LLRSAA-----LSRHIESALGKAGVAYRMIGGHKFYERKEIKVLIDYLRVVSQPDNNDAL 409 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIR-WGIDDDN------VRELELPATGQHT 523 +++VP R I E ++ L + +S + W + + + P Q Sbjct: 410 ARIINVP----RRGIGEATVKALIEEAEQSDMSLWTLILKHCRGNRKAKANIRPKMEQKL 465 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER- 582 + + S + V + L+ L L ++R Sbjct: 466 NTELIRTITSLQKQASEISQSSPVTLVNLIEQLLTHL-----DFKKYLEEEYTEEHEQRW 520 Query: 583 -PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ-WQAIIAEGLGAQYGDAVPLSLLRDE 640 ++E++ + D + F PD + + ++Q + L Sbjct: 521 ANVQEFVNLVSDFMKDFGAPDEDALPEIDNLDQVKVDDM--------------LGRFLAN 566 Query: 641 LAQRLDQERISQRFLAGP-VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 +A D + V I T+ + + + VV + + G P + Sbjct: 567 VALASDAQNKGDTTEQKSLVTISTIHAAKGLEWPVVFVPSVYTGSIPHSRSEDT------ 620 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD-NSERFPSVLVQ 749 D++R L A+ A+ LY+S Q +S+ S V Sbjct: 621 ----------DEERRLLYVAMTRAKALLYLSCPLYGSQGLSSKVELSPFVA 661 >UniRef50_B6WA23 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6WA23_9FIRM Length = 910 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 84/630 (13%), Positives = 188/630 (29%), Gaps = 93/630 (14%) Query: 339 QSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 +SDIL++ ++ E N S+I S E+E + + ++ Sbjct: 268 KSDILDIN-------HLYENFEKYNPEKFWDKTSNIKIVESISSTNEIENMALMIEKLIR 320 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 + DI +++A+ D Y I+ +F +P I + + V++ ++SL+ Sbjct: 321 --KGYSYSDISLVMANEDEYENLIRRIFSRM----NIPIFIDKSQKMSDNHVVKTWLSLI 374 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL---RQWVNESGIRWGIDDDNVRELE 515 L F D+ A + ++ D E L + + ++N I+ + D+ Sbjct: 375 RLVVFNFRKTDLEAFIRSDLI----DFGENSLERVLVFQNYMNTRKIKGSMIFDDK-YFT 429 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 L + L + E S + ++ ++ Sbjct: 430 LDENFYKGEIKEEKKEELAKVNSIRKIILDLTNDLYEISNKNISA----SDIVKKIFNLI 485 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 + + +D + I ++ I+ + + L Sbjct: 486 DNERIKSGFNHYQEYIKDNKIEIY-------EENKQIWDKFITILEQIVSIMKDGKANLR 538 Query: 636 LLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL-- 692 + + + + I A V I R K+ +GM D +P Sbjct: 539 KIYKLIQKACEATTIGLIPPAIDQVLIGDFSRDRINDRKIKIFVGMTDIYFPENNNSDML 598 Query: 693 ------------GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 GFDL K K+ D+ + R + ++ QK+ SY + ++N Sbjct: 599 ISENEKTSLEKEGFDLKIYKAKKNDKILLNILR------MFTSSQKIIFSYSLIN-KNND 651 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDE-------------ALNCDESEARVKAHLTCLHTRM 787 S + ++I+ Y + + +K Sbjct: 652 PMNKSTSISDIINIFPNISYQKISTGKFDLVKYSKDLLDMKAYQILWDIKEKEKVSEIEK 711 Query: 788 PFDPQNYQPGERQSYAREWLPAASQAGK------AHSEFVQPLPFTLPETV------PLE 835 F Q + S E+ + + + +S PL + + + + Sbjct: 712 EFVKAYLQFKKDFSKNYEFNISKNSSYDLFIKGFTYSNQKNPLDKEISKKLYNKNRFSVS 771 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ---QLLNALVEQD 892 ++ + P + F L+ ++ + I + ++ + Sbjct: 772 EIESYARCPYKYFINYGLRAKKSK---------NLDVDMMEIGNIVHYNMENISKDLRGI 822 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQ 922 D E L + + L F + + + Sbjct: 823 DIENLDDKKLES--LVKENFEKAIESSLEK 850 >UniRef50_D0LEA2 UvrD/REP helicase n=3 Tax=Corynebacterineae RepID=D0LEA2_GORB4 Length = 1129 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 107/819 (13%), Positives = 217/819 (26%), Gaps = 104/819 (12%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSEN-AGQLFNSDGEQDVGNPLLASWGKLGRD-- 309 DP L R R +D + + ++ + + + +G G D Sbjct: 276 DPELLIAQRARIRHLLVDDAQHLDPQAAQLVKLIGTGTTSTLIAADTDQSVFGFRGADPR 335 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 + L++ S +++ + + + + + A Sbjct: 336 FADDLAEPGSDRDILLDTNFRSEAQIERVGRVLASRLPGAR-----PHPYPQAPAESPAT 390 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + V S +E + D LL + + V+V + P ++ F SA Sbjct: 391 GAGGVQVRVFGSSAKEATAVAD-LLRRAHLFDGVPWSRMAVIVRSVSLALPPLRRAFRSA 449 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPD--------SRFVSEDVLALLDVPVLAA 481 P + + A + +L + F ED ALL P+ AA Sbjct: 450 GVPLTTP---ASGLPLHRQRAVVALMLVLRVVAARTTPAQADDFDIEDAAALLSGPIGAA 506 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVREL-ELPATGQHTWRFGLTRMLLGYAMESA 540 +R LR+ V S + G D L L + R L A + Sbjct: 507 ----DPGAMRRLRRGVRRSSEKRGDDGAQQDSLTALRSAILDPLLAARYREDLTDAERAP 562 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 V+ E + G W Sbjct: 563 LDRVLDVVAAAEKVHTAGRGLE---------ETLWAGWQATGLERRWAASAVRG----GP 609 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 + + + + ++A +L ++ ++ + + V Sbjct: 610 GGEQADRDLDAVMAMFEAAANFADTLPAAGPAGFVHYLGQL--QIPRDSRTATAASDSVT 667 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP-------------LGFDLMSQKPKRGDRS 707 + + + VV + G+ DG++P + G D + + Sbjct: 668 VLSAHAAVGREWDVVAVAGVLDGLWPSLRSRGSVLATGQLVDLLDGVDPDAVDKLARPAA 727 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 D+R L L A A+++L ++ + + E PS + E+ D + S + Sbjct: 728 AIADERRLLLVACTRARRRLLVTAV---EDGSGEASPSRFIGEIADALAGSTQDADADTP 784 Query: 768 NCDESEARVKAHLTCLHT---------------RMPFDPQNYQPGERQSYAREWLPAASQ 812 +E MP + A +P A Sbjct: 785 APEELPLDPGVDRVLSLPSLVATLRSVVTAGVGEMPDERTMAAARLLARLADADVPGAHP 844 Query: 813 AG-----KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 S+ P + + +R + Sbjct: 845 RDWYGLAAPSSDAPLWTPDDGAVVLSPSNVDALTRCSLRWLLERNGG---------RDGD 895 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 L G + + Q + ++ + R D G + E + Sbjct: 896 GTPALTGSLVHTLVQAVAGE-LDPTEVTEALRAIWDRVDTGAGWYSARELERAESMLVNF 954 Query: 928 ADRVIACRQPGQSMEIDLACN----------GVQITGWLPQVQPDGLLRWRPSLLSVAQG 977 + + R + ++LA + V++ G + +++ DG R + A+ Sbjct: 955 REWLRISRSDLDEVGVELAVDATIPATPDDPAVRLRGRMDRLERDGAGRPVVVDVKTAKT 1014 Query: 978 M------QLWLEHLVYCASGGNGESRLFLRKDGEWRFPP 1010 Q + Y + +G L D P Sbjct: 1015 PISKADAQDHAQLAAYQVALAHG--GLTGADDAVVSAEP 1051 >UniRef50_B2UPY5 UvrD/REP helicase n=2 Tax=Verrucomicrobia RepID=B2UPY5_AKKM8 Length = 669 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 75/556 (13%), Positives = 165/556 (29%), Gaps = 94/556 (16%) Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L H++ L Y ++ + + L + Q Sbjct: 185 LSNHLDAILEVH---DQYVARKQETNSMDFDDLLLNVVRLFQEQEHLRALYGSRFQHILV 241 Query: 290 DGEQDVGNPLLASWGKL-GRDYIYLLSDLESSQELDAFVDVTPDNLLH------------ 336 D QD N L + + R++ L+ + +Q + ++ +N+L Sbjct: 242 DEYQDT-NYLQSRLIDMLAREHGQLMVVGDDAQSIYSWRGADMENILSFTTRYPAAKTFK 300 Query: 337 -----NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHD 391 +ILEL N A+A ++ + + RP + + + + + + + Sbjct: 301 IETNYRSVPEILELSNAAIAANEVQIEKQLRSVRPTGEMPPA--LVPLNDDRMQAKFVVQ 358 Query: 392 RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVL 451 R+ ++ + P +I V+ + F +P+ I+ + Sbjct: 359 RIRDLI--EEGTDPSEIAVLYR-----AHFHSMELQMELTRGEIPFRITSGIRFFEQAHI 411 Query: 452 EAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 + ++ + + + + I + L IRW Sbjct: 412 KDVVAFMRFVVNPRDELSFRRM-----VMLLPGIGPGMAQKLW-------IRWT------ 453 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 P + Q T + ++L + + A+ L L Sbjct: 454 ---ACPESRQETPPESFSALMLDFPVP-------------------AKSRTAWTQLCYTL 491 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 + P L + + + + E Sbjct: 492 DELAPAGKLAGPASMLLSINEAVYDEYMQAAFENYDQRRQDLLHLAGFSERFE------- 544 Query: 632 VPLSLLRDELAQR--LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 +L+ D E + F G V + T+ + + + VV L+G+ DG++P Q Sbjct: 545 -STEDFLSQLSLLGNTDDESAAADFSGGSVTLSTIHQAKGLEWSVVFLIGLCDGMFPHQR 603 Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR--SIQDNS-ERFPSV 746 GD + +++R LF + A+ +LY++Y Q + + PS Sbjct: 604 VIDD----------GDLAGLEEERRLFYVGITRAKDQLYLTYPRWNCRAQGGTFMQMPSR 653 Query: 747 LVQELIDYIGQSHYLP 762 + E + + + Sbjct: 654 FLDEFPAGLVEEWEVE 669 >UniRef50_A8TD22 UvrD/REP helicase n=2 Tax=cellular organisms RepID=A8TD22_METVO Length = 1085 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 54/442 (12%), Positives = 138/442 (31%), Gaps = 29/442 (6%) Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE----E 399 E+ + + + + D I E E + + + ++ + Sbjct: 309 EIVELSKELIQNNPNRENKESKAHDGNGEKIKILKTPDDYSEAEWVAEEIEKLISTKNDD 368 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 D T P+DI ++ I + A +R +P Q P+++ ++ ++ Sbjct: 369 DLTYEPKDIFILTRTIKDGKKY-----SEALKNRMIPSEYIGNHNLQEQPIIKDVLAYIN 423 Query: 460 LPDSRFVS-EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW--GIDDDNVRELEL 516 + + F S D + R + E ++ + Q E + G ++ Sbjct: 424 VVSNPFESGVDFKRIFT------REGVDEHDIQKINQKAKELSYKNAEGDGIYYTLQMLY 477 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD---ESSGLIAELVGHLASLLMQLNI 573 + E S + + + +++ + + +L Sbjct: 478 TNEYNEYNEYNKDNKDNKDNNEELDTLTNSNVDLNLNLDLEDKNKDILLKIFENIKELIC 537 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 +++ L L D+ D + + ++ + + Sbjct: 538 YKKNHKPSDTLIYLLNKKTDIYKIEAYNDTKLSRKNIHLLNSLVNVVEDFEETSNLEFEN 597 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 +S + L+ L+ ++ ++ + V I T+ + KVV + + D P + Sbjct: 598 ISEYLNILSN-LEIQQENEFDNSNTVKIMTIHQSKGKEAKVVFIGDLADRHLPLRYNSKE 656 Query: 694 FDLMSQKPK-------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 F + + K ++++ L A+ A +KLY+ Y R + + PS Sbjct: 657 FTVPVELMKSRIKNNVPEKELHKEEELRLLYVAMTRAMKKLYLVYPKRYTGNKRDVKPSE 716 Query: 747 LVQELIDYIGQSHYLPGDEALN 768 ++ + + + Sbjct: 717 FLEYINHIYNEKVEFIESKPFE 738 >UniRef50_Q1CRC0 DNA helicase II n=13 Tax=Helicobacter RepID=Q1CRC0_HELPH Length = 682 Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 51/487 (10%), Positives = 142/487 (29%), Gaps = 91/487 (18%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 + +G G D +L+ F + ++++ ++ + Sbjct: 236 QSIYGFRGADISNILN----------FSKHFKGAKVVKLETNYRSSAEILACANSLISHN 285 Query: 360 RSDNKRPLDPLDSSITFHVCH---SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + + + L S +C + + E + ++ A+L++ L +I ++ Sbjct: 286 QHRHVKTLQSFKGSHKSVICKEYLTQKEESLDVAYQIKALLKKGENL--ENIAILYR--- 340 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + + +PY + + ++ ++ + + + + +L+ Sbjct: 341 --LNGLSRSIEESLNALNIPYRLIGAVSFYERAEVKDALAFMHVVAKKDDRFFIKRVLNK 398 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + + ++ +++ G++ + +L + Sbjct: 399 PP----RGLGKITQEWIFSLLDDE----GLNLEEALKLGAFKDKLNPKNEY--------- 441 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 L + + R +EE+ + N Sbjct: 442 --------------------------ALKKFMAMIGRLREAFEI--SVEEFCARFLEETN 473 Query: 597 AFFLPDAETEAAMTL--IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 + E +++ + L +E + Sbjct: 474 LLKSYEKEDNYEEREGFVKELLTLLKEHFKT---NPTHSLLDFLNE-----SVLDVHNAE 525 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 A V+ ++ + + FK V ++G+ +G +P + DL +++R Sbjct: 526 NAQKVSCMSVHMSKGLEFKHVFVIGLEEGFFPHRGFNQESDL-------------EEERR 572 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDES 772 L A+ A++ L +SY+ + PSV ++E + Q D + Sbjct: 573 LAYVAITRAKEGLQLSYVKERSYFGRKISCSPSVFLEE-AQLLQQDKPPKQDHKKDTPIK 631 Query: 773 EARVKAH 779 + H Sbjct: 632 VGDLIKH 638 >UniRef50_A1SGT7 UvrD/REP helicase n=1 Tax=Nocardioides sp. JS614 RepID=A1SGT7_NOCSJ Length = 1060 Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 100/767 (13%), Positives = 197/767 (25%), Gaps = 70/767 (9%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRD 309 I+ + +L R ++ + L VG+P + +G G + Sbjct: 209 IEAETHRDELRARIGAVFVDEYQDTDPGQVALLRALAGDGRDLVVVGDPHQSIYGFRGAE 268 Query: 310 YIYLLSDLESSQELD---------AFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 +L + D LL Q L Sbjct: 269 VRGILEFPTAFPRTDGAPADVVALRTTRRFGPRLLIASQRVAGRLALPGSIPEEARSAFL 328 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + +P D + + + E E L D LL + + + V+V + P Sbjct: 329 APEAQPNPLGDGRVLVRTFDTERAEAEHLAD-LLRRAHLEDDVPWDQMAVLVRSGRTSIP 387 Query: 421 FIQAVFGSAPADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 ++ A +P + SD P + + L D +V + Sbjct: 388 PLR----RALGAAGVPVEVASDEVPLVRDPAVLPLLDALRAVVDLDTRPDEG---EVEHV 440 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 A + + R + G D + + T S Sbjct: 441 APENGWSLDPARAEGLLLGPLGGLDAGDLRRLARRLRTREKEQGKAEART------PRTS 494 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC-------R 592 + V+ GL V +L L R L EE L Sbjct: 495 RDLVRRVVVEPGFLDGLDGPEVVRARALAQLLLDAREALRVGASAEELLWTLWSRTGWPA 554 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL--AQRLDQERI 650 + + L A ++ + D V + L Q Sbjct: 555 RLRRSVDLGGGAARRAHRDLDSVCALFDVAARADEQRDHVGVRAFLATLVQQQIPADTLA 614 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG------ 704 + V + T + + +++V + + +P + + G Sbjct: 615 ERGARGAAVRLLTAHRAKGLEWRLVVVAHVQQDGWPDLRRRSTLLQADRIGEHGVVPPVS 674 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 R ++R LF A A+Q+L ++ + + PS + EL + + P Sbjct: 675 TRELLMEERRLFYVACTRARQRLVVTAVASPDDEGE--QPSRFLDELGVGVERVVGRP-P 731 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 L+ A ++ L T P + R + +S G + Sbjct: 732 RPLSLPGLVAELRRTLADPETSEPLREAAARRLARLAPEVRIADPSSWWGTRAATRSVEP 791 Query: 825 --PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 P V L+ P + F + + R + + ++ Sbjct: 792 IRDPGQPVPVSASVLEAVAVCPTQWFLEREAGGSAR------------AHQSANLGELLH 839 Query: 883 QLLNALVEQDDAE------RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ 936 L + + D + + + +A + Sbjct: 840 ALAQRVAAGELEPAVEVLMEHVDAVWDRLDFRTPWSRAREHDRVRAAIGRFLQWHLANPR 899 Query: 937 PGQSME------IDLACNG-VQITGWLPQVQPDGLLRWRPSLLSVAQ 976 + E + L V+I+G+ +V+ D L + Sbjct: 900 ELIATEAPFTTVVALEGGEQVKISGYADRVELDADGHVVVVDLKSGR 946 >UniRef50_D2MPE9 Putative ATP-dependent helicase PcrA n=1 Tax=Bulleidia extructa W1219 RepID=D2MPE9_9FIRM Length = 710 Score = 178 bits (452), Expect = 9e-43, Method: Composition-based stats. Identities = 57/532 (10%), Positives = 145/532 (27%), Gaps = 84/532 (15%) Query: 257 LAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLS 315 L K ++ + + QL D VG+P + G D Sbjct: 206 LQKWQQHFHYILVDEFQDIDRIQYQLIKQLTGKDNSLLVVGDPDQTIYTWRGADV----- 260 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS---DNKRPLDPLDS 372 + + F + + + + ++ + ++ + Sbjct: 261 -----RIIVNFEKDFSNTKTILLTQNYRSTSSILKGANSVIKNNKQRVDKELFTDNQSKE 315 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 I S + + + + ++ T T ++ V+ + ++ A D Sbjct: 316 KIYHFSAGSDEYQAAWIAQEMKSI--RLKTGTYSEMAVLYR-----ANYLSRALEKALMD 368 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY I V++ +S L L + +L+ P + + + + Sbjct: 369 ERIPYIIYGGLRFFERQVVKDALSYLRLIVVG-DDLSLTRVLNRP----KRGLGLKTVEM 423 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 + E + Sbjct: 424 IAHRARELNC------------------------------------------SQFELLQK 441 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 + + + ++ WR L Q+ L E +++ T Sbjct: 442 EELFKGKTQDTIRQFVQRVERWR-SLQQKGGL-ELFDFFELVMDESGYRAFLEAEKDTDN 499 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 ++++ + + P + L + L + V + T+ + + F Sbjct: 500 LGHLKSLMEDIR--DFSRYHPEATLEEYLQSVALYGDKEELVENDFVQLMTVHASKGLEF 557 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 V + +N+G++P ++ + +++R L A A++ LY++ Sbjct: 558 DTVFVSDLNEGIFPS-----------ERSLQEGYHGVEEERRLAYVAFTRARKHLYLTDA 606 Query: 733 -GRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 G S + PS + E+ D + + + ++ Sbjct: 607 GGYSFMLQRVKTPSRFIDEIEDLYIEHRGVVKSQEKQESSFYSQFMEKPVRE 658 >UniRef50_C4DDU0 DNA/RNA helicase, superfamily I n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDU0_9ACTO Length = 1041 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 99/763 (12%), Positives = 187/763 (24%), Gaps = 142/763 (18%) Query: 337 NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 ++ IL + N + P P + +T + ++ E E + R+ + Sbjct: 338 RNRASILTVANTVSEPLR-TMGFPVSPLEPGVPGEGEVTAAMLNTADDEAEWVATRIYRL 396 Query: 397 LEED--------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 ++ + P V+ A + LP + Sbjct: 397 WADNGFAPGSPVEGMPPT-TAVLARRRSQI-----PRLEKALRAKGLPVEVIGLGGLLDA 450 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 P + S L++ + LL P R+ I + L E Sbjct: 451 PEVRELHSTLTVLARPTAGPAFMRLLTGP----RWRIGPRDIAALHARAREL-------A 499 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 R E A G + +++ + +L Sbjct: 500 PERRGFEPSAEGLN-----------------EASLAEALEDLGDLRRYSDAAAERYTALR 542 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 +L R L Q + ++L A ++ A I E + Sbjct: 543 EELGYLRSRLDQP-----VSDLIAEILK--VSGLDIEVAVHRGDSERLDAFIDEAVRYTS 595 Query: 629 GDAV-PLSLLRDELAQRLDQERI----SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 ++ L L ++ER G V I T+ + + + V + G+ G Sbjct: 596 TASLPSLDGFLSYLDAAEERERGLELTGTTEHTGAVQILTVHAAKGLEWDCVAVPGLAKG 655 Query: 684 VYPRQLAPLGFDLMS---QKPKRGDRSRRD------------------------------ 710 V P ++ + + P RGD + Sbjct: 656 VLPGKVMGGSWLTDTGKLPYPLRGDAAELPYFRLGGVTKAAELSRAEAEFKKDVQFHHEV 715 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 ++R L AL A+ L+ + S R PS + E + G+ D Sbjct: 716 EERRLAYVALTRARTHLFACGYWWDDGE-SAREPSPYLDETVAAGGRVDEWIEDPGEENP 774 Query: 771 ESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK-----------AHSE 819 + A + L ++QA + Sbjct: 775 LLATELSADWPEPEPLGSNQITVAAAAGAVRASDGALDDSAQAKRWAEEAELLLAERAES 834 Query: 820 FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 + +P + + L + A R E P R Sbjct: 835 ASDGMEVPVPSQLSVSQLVAWHADAQEF------AARLRRPVPEPPAP------HTRRGT 882 Query: 880 INQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL--ADRVIACRQP 937 + + DLP A GE + + +Q+ A + Sbjct: 883 AFHAWVEKRFDGG-------TLFDMDDLPGAADGEPDTDAELAALQEAFNASEWASRTPI 935 Query: 938 GQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW----------LEHLVY 987 + GV + G + V + + + + Sbjct: 936 AVEVPFVTVLEGVVVRGRMDAVFATDDGGYEIVDWKTGRPPRGHAAKAAAVQLAAYREAW 995 Query: 988 CASGGNGES-----RLFLRKDGEWRFPPLAAEQALHYLSQLIE 1025 G S ++R++ R L L QL Sbjct: 996 AVLRGVHRSKVSAAFHYVRQNVTVRPSGLP------LLEQLAA 1032 >UniRef50_A9WPI8 ATP-dependent DNA helicase n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WPI8_RENSM Length = 1080 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 110/798 (13%), Positives = 213/798 (26%), Gaps = 137/798 (17%) Query: 295 VGNPLLASWGKLGRDYIYLLS-------DLESSQELDAFVDVTPDNL--LHNIQSDILEL 345 VG+P + +G G L E A ++L L + + EL Sbjct: 298 VGDPHQSIYGFRGASAGQLFRFPGIFRRADGQPAETAALTVAWRNSLSILESANAMSSEL 357 Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 RA G S + + + E + + DR+LA ++ Sbjct: 358 NRRAEQGHAESSTQLSPLQPRPGAPRGEVELSRFGTENEEAQAVADRILAR----RSVRS 413 Query: 406 RDI--IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 +D+ ++ + +A + + Y I + P + +S L + Sbjct: 414 QDVSVAILCRRRTQF-----QALQTALEAQNIDYEIVGLSGLLATPEVIDVVSTLRVLVD 468 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 S+ ++ L+ AR+ I + L L W + + Sbjct: 469 PTRSDALMRLM----TGARWRIGSKDLMALADWSKFLVASAKRARKASPTVIDDVAEAAS 524 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + + Y D + L A + L +L +L RR + + Sbjct: 525 LIEAIDALDADYWP-------------DSARELSATGLQRLLALRDELRTLRRFVG-DDL 570 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG-DAVPLSLLRDELA 642 L V R +L L + A + V + L+ Sbjct: 571 LSLISEVERTILLDIELAAKPGISYHRA-RHHLDAFQDAASSFLQSAERVDVLAFLAWLS 629 Query: 643 QRLDQE----RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP------- 691 +E + +G V + T+ + + + V + G+ +P A Sbjct: 630 AADGEEGGLEMLPVEPKSGAVQLLTVHAAKGLEWDEVYVPGLATKSFPSDRADHWGTGNR 689 Query: 692 --------LGFDLMSQKPKRGDR----------------SRRDDDRYLFLEALISAQQKL 727 DL K + D+ ++R L A A+ L Sbjct: 690 ALPWPLRGDRADLPEWKLQGEDQRTWIGELAEFTESVKDHALQEERRLAYVAYTRARSFL 749 Query: 728 YISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP-------GDEALNCDESEARVKAHL 780 +S + + S + EL+D Q + E +A + Sbjct: 750 AVSTSKFAGTSVRAKEISPFLTELVDVAEQESAASYGLGFRHWPAEQHLPEENPEREAVI 809 Query: 781 TCLHTRMPFDPQNYQPGE-----------------------------RQSYAREWLPAAS 811 P + GE + W A Sbjct: 810 RAQWPFDPLAGPYLKIGEKVVEPLGSRRAALLSAAQRVQAARPSELSLPELSARWGIEAK 869 Query: 812 QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI 871 + + + Q + LP + TL +P Q R P Sbjct: 870 RLLEQRTVRKQVIDVELPTHISASTLVELRVNPAAVVAQ------IRRPVPRKPGL---- 919 Query: 872 LEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR- 930 + + + + L G+ P A + Q +++++ + Sbjct: 920 --AARKGTAFHAWVESYFGRAGQLDL-------GEFPGAADDFVEDAYQLEQLRENFEAS 970 Query: 931 -VIACRQPGQSMEIDLACNGVQITGWLPQVQPD-----GLLRWRPSLLSVAQGMQLWLEH 984 A + + I+ GV + G + V D L+ W+ L + + Sbjct: 971 EWAAKQPSEIEVPIETKIAGVVVRGRIDAVFQDADGGWELVDWKTGQLPKGKELGDRSVQ 1030 Query: 985 LVYCASGGNGESRLFLRK 1002 L G + + K Sbjct: 1031 LALYRLGWARLKGIAVEK 1048 >UniRef50_C7QE44 UvrD/REP helicase n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QE44_CATAD Length = 1134 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 131/952 (13%), Positives = 246/952 (25%), Gaps = 117/952 (12%) Query: 152 GHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPS-- 209 G LGE W L AL A + + P L Sbjct: 155 GIGGGALGERIQWPQDLRAALAT---------RGFAEELRTVLARARELGLDPTELAQAA 205 Query: 210 ----RVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQR 265 R SA YL L G L+ D+ + R Sbjct: 206 RRADRGDWYAASAFFEEYLDVLDVQGVLDYGELVHRAVLLAGQEDV---RRELRHDFRAV 262 Query: 266 RHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDA 325 P A +D G+P + + G D +L E+ + +D Sbjct: 263 FVDEYQDTDPSQVRLLQALAGDGAD-LVVFGDPDQSIYQFRGADVRGILDFPEAFRRMDG 321 Query: 326 FVDVTP---------DNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL---DPLDSS 373 T LL + + + + E + P+ +P++ S Sbjct: 322 SPADTAVLRTSRRCGPALLKASRDLTRRMPIPLLPTEKVREHRDLAAEGPVADGEPIEGS 381 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + +P E++ + D + + + +I V+V P ++ A Sbjct: 382 VQVFTFPTPNTELDNIVDMVRRA-HLEDGVPWDEIAVLVRSATRSIPALR----RALIAA 436 Query: 434 YLPYAISDRR-ARQSHPVLEAFISLLSLPDSRFVSE-DVLALLDVPVLAARFDITEEGLR 491 +P S + P + + L + D+ DV L L L Sbjct: 437 GVPVDTSGDELPLAAEPAVAVLLQALRVADNEAALTPDVARALLSGPLGGMDAFELRKLA 496 Query: 492 YL----RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL-TRMLLGYAMESAQGEWQS 546 + N++G+R + + EL + + + +LL A+ Sbjct: 497 RALRAEERAANQNGVRGVPAEHSAVVPELARITEPSVNGVRPSEVLLREALAEPARLVAM 556 Query: 547 VLPYDESSGLIAELVGHLASLLM-------QLNIWRRGLAQER---PLEEWLPVCRDMLN 596 E + + L+ +L L G ER W Sbjct: 557 DEDVAEPARRLGMLLLRTRQILRGGGSVERALWELWSGGGDERDRNRAHRWPERLERTAQ 616 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 + + + + A + + +Q Sbjct: 617 RGGNTGRAADRDLDAVCVLFDYAARAEDRATGRGVRNFIADLEA-QELAGDSMAAQSSRG 675 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD---------LMSQKPKRGDRS 707 G V + + + + ++ V + G+ DG++P L S + + Sbjct: 676 GAVRLMSAHKSKGLQWRFVIVAGVQDGLWPDLRLRGSLLQADLIGRNGLRSMEEIPTAST 735 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDE 765 ++R LF A A+++L ++ + ++ + PS V EL + L Sbjct: 736 LLAEERRLFYVAATRARERLVVTAVDSALIGDDAAAEAPSRFVYELGVEVQPLPGLR-KR 794 Query: 766 ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 AL A ++ LT + Q + + AH + L Sbjct: 795 ALAIPALVADLRRVLTDPKSSDQL-RQAAAERLARLADAQAGDGRPLVPSAHPDKWWGLV 853 Query: 826 FTLPET-----------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 + + +R F + + Sbjct: 854 EETASEQPVRDPAKPLLLSASQVAAIDECSLRWFLDHEAAAHEQKTV------------A 901 Query: 875 LSRYQINQQLLNALVEQDDAERL----FRRFRAAGDLPYGAFGE--IFWETQCQEMQQLA 928 L + L + + + D RL R R L + A + E +++ Sbjct: 902 LGFGNVVHVLADEVAKGDTPARLDVLMERLDRVWDRLSFEAQWQSPQQKEEARAALERFL 961 Query: 929 -----DRVIACRQPGQSMEIDLACN----------GVQITGWLPQVQPDGLLRWRPSLLS 973 DR Q ++ L ++I G +V+ D Sbjct: 962 AWHVTDRGRLLHSSEQEFDVRLNVGAGDSEDGEGFDLRIRGSFDRVETDEAGLVYVVDFK 1021 Query: 974 ------VAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHY 1019 Q + VY G + + G L A Sbjct: 1022 TGKNVPTKNEAQEHPQLAVYQLVVREGAIQGVSNESGGAELVFLREGDAAGL 1073 >UniRef50_C4XGR7 ATP-dependent DNA helicase n=4 Tax=Desulfovibrio magneticus RS-1 RepID=C4XGR7_DESMR Length = 646 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 65/520 (12%), Positives = 148/520 (28%), Gaps = 105/520 (20%) Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP-----LLASWGKLGRD 309 YL + + D QD NP L A + GR Sbjct: 198 RYLYDFDDLLLQAYRFLAHEGGAEKYHDVYPHILVDEYQDT-NPAQLAVLQALIAESGRG 256 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQ-----SDILELEN-------RAVAGVNIEE 357 + + Q + AF + N+L Q +I+ N A I+ Sbjct: 257 SFWACG--DDWQSIYAFNGASIGNILRFKQIFPSAQEIVLNVNYRSTPAILAACQKLIDH 314 Query: 358 FSRSDNKRPLDPLDSS---ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 R K + + + + E ++ + + + D D+ V+ Sbjct: 315 NQRKIPKELIAHKPGGNHDLFVIDTFNEEEEACLVANEIKHLSVSD-GTAYSDMAVLYR- 372 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV---SEDVL 471 + F + + +P+ I + + + + L + E + Sbjct: 373 ----ANFQSEILQNVFVRADIPFYIDNGMSFYERREVRILLDYLRFIEDPDSVAGDEALQ 428 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +++ P + ++ + + Sbjct: 429 RIINAP----NRYLGKKFMEQV-------------------------------------- 446 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 G A ESA +Q++ D + ++ + + + + + P E + Sbjct: 447 -AGVANESACSLYQALRTMD---FDSPYIRRNVHEFVRLMESFIQNEGEMGPAEVLAKLR 502 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 + + F+ D + + ++ +S +A D+ Sbjct: 503 QRLDYDRFVTDKDIPSPDNQAVLNLNQLLQSAARYA-----SISEFLTYVATVEDETCSR 557 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 V + T+ + + F VV ++G+ +G+ P R ++ Sbjct: 558 D---PSGVKLMTIHKAKGLEFPVVFVVGLVEGIMP-----------------TKRGDLEE 597 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 +R + AL A +LY++Y + S+ + E+ Sbjct: 598 ERRICFVALSRAMDRLYVTYSHNYL--GQPAKRSIFIDEM 635 >UniRef50_B7J2J0 Exodeoxyribonuclease V, gamma chain n=26 Tax=Borrelia RepID=B7J2J0_BORBZ Length = 1079 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 120/942 (12%), Positives = 299/942 (31%), Gaps = 147/942 (15%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEM-ILVQSTGMAQWLQMTLSQKFGIAANI 60 + +Y +N+++ + ++ + + D+ F+ E I+V++ + + ++ T+++ GI+ N+ Sbjct: 1 MYIYKTNKVNKIYNKIKELTQ---KDNIFKKETLIIVKNDLLREEIKKTIAKLNGISYNL 57 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMT---LLPQLLEREDFTLLRHYLTD 117 + + ++ + + + S+ L T +L +L+ E Y+ D Sbjct: 58 NIK--KNAAKSIYEISFKNPNIKKYIEENTFSFYLETEKFILYNILKTEKL----KYIKD 111 Query: 118 DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGH---LVEGLGEAQAWQAPLWKALVE 174 + + +SK DLF Y + WE E L + Q L+K L E Sbjct: 112 FKSTKNRYFFASKIIDLFHHYYSKFSKLIETWEDNGFLFQEENLKPYENMQKELFKKLFE 171 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 + NL+++ I+ E T ++ G + + + L +L K Sbjct: 172 KQK-------NILNLHKKIIQ--EKPTKKIEIEIKKIIFIGNNR--EIEKKILNSLEKIF 220 Query: 235 E--IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE 292 + +H+L Y + L K ++ ++ EN ++ Sbjct: 221 DFEVHVLIFEDLLNYESTLVKELLLTKTKINPIKYQALEKVDIELFKGENFLTSIKNNII 280 Query: 293 QDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAG 352 L D ++ +E++ + ++H++Q + L+L + A+ Sbjct: 281 AKTPISTLD-------DSFKIIEAKNQKREVEIL----TNQIVHSMQKNNLKLSDIAITC 329 Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 + + C + E+E V+ Sbjct: 330 LQEKFNEYLPY------------IEECLNKY-EIEY--------------------SVLC 356 Query: 413 ADIDSYSPFIQAV--FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 + S I A+ + + S + +S Sbjct: 357 YNNLSRGESIIALKRLMDLFVSKN------GTISNFSRKEVFDLLS-------------- 396 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 + +F+I+ L YL ++ + I +G + + L ++W G R Sbjct: 397 -----NNKVMKKFNISTSELNYLIEFSDTMNISFGANKTHKENLNYDQNFLNSWEDGFNR 451 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER-PLEEWLP 589 L+ + ++ + + E + L +++ L + + EW Sbjct: 452 FLMSEIFDEK---YEEETQKESTRFQDQESIMKLITIVKSLYEDINYFKNKAYKVYEWAE 508 Query: 590 VCRDMLNAFFLPDAET--EAAMTLIEQQWQAIIAEGLGAQY--------GDAVPLSLLRD 639 + + + + + + + ++ + Y + L + Sbjct: 509 IIEIFIQKYIDLEDFNTTDEYLQNKIKSFKNFPKDLNDNLYKNYLKEINEIKIEFYLFKI 568 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 L + L++E+ + + I + + K + LG + ++ +L+++ Sbjct: 569 MLEESLEKEKYGVMYKKNGILIANYKEIEYLQKKEIHFLGFQ--KFNSKINYDNMNLLNE 626 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 + + + ++ + + +K Y+ + E S + +++++I + Sbjct: 627 YYEHENTEK--EEITALFNLIFATSEKFYLYCSFQDNLS-PEINTSKTINKILEHIQKYE 683 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ---SYAREWLPAASQAG-- 814 K H DP ++ + +Y E A Sbjct: 684 -----------------KNFQIEKHPNENHDPVYFKDAKENYLINYDPEAYNIAKILQNS 726 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQ-----VNFRTEDSEIPDTEP 869 K + P + L L+ ++P + F++ L + E E + + Sbjct: 727 KPIGFKQNKIKLESPIKLNLYELKNALSNPYKHFYEKTLNVKIQDIRLENEIKEKQEEQI 786 Query: 870 FILEGLSRYQINQ-QLLNALVEQDDAERLFRRFRAAGDLPYG 910 F + + I LL+ + + + Y Sbjct: 787 FSVIEIIYRLIKNSTLLHEYIMGKKDDARKAIEIIKNHIRYE 828 >UniRef50_Q2NK11 UvrD helicase n=2 Tax=Candidatus Phytoplasma asteris RepID=Q2NK11_AYWBP Length = 761 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 60/560 (10%), Positives = 151/560 (26%), Gaps = 131/560 (23%) Query: 256 YLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKL----GRDYI 311 K R++++ FE ++ L + D + LL + + + Sbjct: 185 QKEKNYQREKKYEFEMPIKVKYQIFLQNNNLVDFDDLILYTHQLLQENANVRVFYQQKFQ 244 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 YLL ++ Q+ D F LL +I + + + +++ L+ Sbjct: 245 YLL--VDEFQDTD-FFQYQILTLLAKEHQNIFVVGDPDQNIYSFRGARFENSQLFLNKFK 301 Query: 372 SSITFHV-------------------------------------------CHSPQREVEV 388 I F + E Sbjct: 302 PKIAFLEENYRSSKNILDKANLLIKYNKAHLFKKNLKSTKSGGEPVICKFFADYKEETRY 361 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 + + ++ + + +D ++ + +PY + + Sbjct: 362 IAKTIQNLVLQGV-YSYQDFTILYRT-----NILGRPLEEKFLANNIPYQVFGGASFYQS 415 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 +++ F++ L+ + + +++ P + I L +L + E I Sbjct: 416 KLVKDFLAYLNFIANPSQDFNFKRIINTP----KRGIGTTSLLHLEKLAQEKKI------ 465 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 L Y + + + L L Sbjct: 466 ----------------------------------TLFDTLKYLDQTPIQPNAKTKLNELK 491 Query: 569 MQLNIWRRGLAQE--RPLEEWLPVCRDMLNAFFLPDA-----------ETEAAMTLIEQQ 615 + R+ L + L + + + + D + ++ Sbjct: 492 KLITNLRQKLINDSFDCLSDIITYIDEKIEYCRKNDETCKMQSIKDSDSDLYYIEELKSV 551 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA--GPVNICTLMPMRSIPFK 673 + G+ + L + +Q + + V + T+ ++ + F+ Sbjct: 552 FMQAEKNLEGSIFEKLTQLLDQISLYNETNEQTEQDSKNPSKNDRVKLSTIHKVKGLEFR 611 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 VV + D + +S ++ R L A+ A++KL+++ Sbjct: 612 VVFITAFEDIFFDCNQKE--------------KSDLEESRRLAYVAVTRAEEKLFLTGAY 657 Query: 734 RSIQDNSER--FPSVLVQEL 751 + + PS +QE+ Sbjct: 658 QRFSYGKQIDSQPSRFLQEM 677 >UniRef50_C1E652 ATP-dependent DNA helicase n=2 Tax=Micromonas RepID=C1E652_9CHLO Length = 907 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 66/539 (12%), Positives = 142/539 (26%), Gaps = 72/539 (13%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYI 311 R R ++ + E L VG+ A + G + Sbjct: 272 SEEARLFYRQRWRHVLVDEFQDTSLSQYELIRALAAETARVFVVGDVDQAIYSWRGAEVA 331 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 + + +S LL + A A + + P Sbjct: 332 NIRTKFDSD------FAGAGTVLLTKNYRSTATIVKAAQAVIGESRDRSPLELDAVRPGG 385 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 + E A + +DI V+ P A Sbjct: 386 KDVAVVATEDEIE--EADFAAREAARAARSGVPLKDIAVLYRTHSQSRPL-----EEAFI 438 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +P+ + A + ++ ++ L + + + + +++ P I L Sbjct: 439 RAGVPHVVVGDTAFYTRKEIKDLVAYLRVLFNSRDTVSLQRIINTPP----RKIGPGTLE 494 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 L W LP G+ + ++ +LP Sbjct: 495 KLEAWAA----------------GLPWVDGMPQPLGMALLDRTWSTPDQD----DLLPPA 534 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 GL A ++ + + + P V R + ++ D E Sbjct: 535 ADMGLAAGAYKAVSGFVSVMRELGEAVEVSDPGALTEEVVRRIGFEEYVADMENGDERVG 594 Query: 612 IEQQWQAIIAEGLGAQ----------------------YGDAVPLSLLRDELAQRLDQER 649 ++ +I ++ + L + ++ + E Sbjct: 595 YVKELVSIASDPSAVESLDGVDGGGAAGGGDNGATKRKSTGHAGLGEFLEGISLLMSAET 654 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 S+ A V + TL + + F V + G D + P + D + Sbjct: 655 RSEDEGADAVKLMTLHAAKGLEFDTVLITGCEDELIPFKRGDAS----------SDAAEH 704 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEA 766 D++ LF L A++KL++ + + + PS ++ + + + A Sbjct: 705 DEEVRLFYVGLTRAKRKLFLCRAFKRQRFGRTVYADPSPFLEVIRESLVGGKPPQARRA 763 >UniRef50_UPI0001C314BB UvrD/REP helicase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314BB Length = 1184 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 95/687 (13%), Positives = 186/687 (27%), Gaps = 100/687 (14%) Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD 441 E L R+ +L D D+++++ + V+ A D +P + Sbjct: 479 RVAEARALAARVRELL--DGGRRAGDVVLLLRATGDLA-----VYERALTDLAVPTYVIG 531 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 R + + ++ L + + + +LL P++ ++ +GL + S Sbjct: 532 GRGYWAQQQVRDLVAYLGVLANPRDGVALQSLLASPLV----GLSSDGLVQVVAAARASR 587 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 W R LL + + + + A Sbjct: 588 REG-------------EPPDPWWVLTEGRELLARLAPDDAERVEELRAWLPAERATA--- 631 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLIEQQWQAI 619 LE L + + L + + + + Sbjct: 632 ------------------PRHSLESLLDRVLDQTGYDVELLRLPSGARRLANVRK-LMRL 672 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA--------GPVNICTLMPMRSIP 671 E + D + EL L+ R R V + T+ + + Sbjct: 673 AREFEAEEGRDLRGFVDMVMELGGGLESSREQDRESEAPVEGEALDAVRLMTIHRAKGLE 732 Query: 672 FKVVCLLGMNDGVYPRQ----------------------LAPLGFDLMSQKPKRGDRSRR 709 F VVC+ + G P AP + R+ Sbjct: 733 FPVVCVADLGRGS-PAAGSDVVRVGRDGRVGIKLKTLDGSAPRPALAYRPIGEARARAES 791 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL---PGDEA 766 D++ L+ A+ A+++L +S + + + + + P E Sbjct: 792 DEEARLYYVAMTRAREQLILSGAVPTEPWPEPKLGAPAITWIGPAFVPEIARLAAPDGEP 851 Query: 767 LNCDESEARVKAHLTCLHTRMPFDP----QNYQPGERQSYAREWLPAASQAGKAHSEFVQ 822 +E + A+ P G S+ARE PA +A Sbjct: 852 SGVVSNEGQAVAYSVVRPGAAALAPSLAGSEGDRGRVLSHARERTPAGRRAHVRARATRP 911 Query: 823 ----PLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRY 878 T+ +L R + + L++ +D+ L +R Sbjct: 912 IGDGGGTAPPVATLSYTSLADHARCGYRFYLERVLRL-PPVDDAPRGRGGRHGLAASTRG 970 Query: 879 QINQQLLNA----LVEQDDAERLFRRFRAAGDLPYG-AFGEIFWETQCQEMQQLADRVIA 933 I LL + DAE + R AG P EI L +R+ + Sbjct: 971 VIAHALLEQVDFVRAQPPDAELVRRAAVRAGADPTAEELDEIRGLVVRFLASPLRERLAS 1030 Query: 934 CRQPGQSMEIDLACNGVQITGWLPQVQPDGL----LRWRPSLLSVAQGMQLWLEHLVYCA 989 R + A + + + G + +G + W+ L A + Sbjct: 1031 ARDLRREQAFSFALDELPLVGVFDAIAREGNRTLIVDWKSDRLEGADPGETVARAYGLQR 1090 Query: 990 SGGNGESRLFLRKDGEWRFPPLAAEQA 1016 + + ++ E L A Sbjct: 1091 AAYALAALRDDAQEVEVVHCFLERPDA 1117 >UniRef50_C5C3C7 ATP-dependent nuclease subunit B-like protein n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C3C7_BEUC1 Length = 1043 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 102/733 (13%), Positives = 203/733 (27%), Gaps = 94/733 (12%) Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 R+ + L+D + L ++D + A AGV + + Sbjct: 200 RLAHAERELLAALADARPLHAV--------VALTGVRRADEEVVRGLAEAGVEVPQERAD 251 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 D R + EV ++ L+A LE P V+ A Y+ Sbjct: 252 DGARLGPAPPVATYVRHASDADDEVRLVARELVATLETVPAHRA---AVLYAGASPYARL 308 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 + + P R + +F++LL LP +RF DV L + Sbjct: 309 LHERLETVGIRVNGP----GVRGVAERAITRSFLALLRLPQARFARADVFRALADAPVRT 364 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 + + Q + + G D D W R+ Sbjct: 365 SDG-SPVPVARWEQVSRLAAVVEGTDWDARLR---------DWAARQHRVAETERAADDP 414 Query: 542 GEWQSVLPYDESSGLIA--ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 + A +G L + + + R + L + Sbjct: 415 RPAVLEAADRDVETAEAMRREIGALIADVTRGTELRTWRELAAWALDLLAARYGESDDLR 474 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 E + A + + + + LS + + L++ V Sbjct: 475 RLPPEEQYAAAALTSALRGLE---VLDDVDPVADLSTAVEAIELELERAVPRVGRFGEGV 531 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL---GFDLMSQKPKRGDRSRRDDDRYLF 716 + L + + VV ++G+ + YP +L G D + + DDR+ Sbjct: 532 YVGPLGEVAGLDADVVFVVGLAEDAYPGRLRADALLGADARAATDRLAPARTWIDDRHRA 591 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG-------------QSHYLPG 763 L +A ++ ++ ++ ++ER P+ + + + +S +L G Sbjct: 592 LLGAFAAAPRVVATFPRGDLRRSTERLPTRWLLPTLRALASDRDLAVTDWDTIRSPHLTG 651 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 + + + + A P AR+ L G + + Sbjct: 652 SPSFATELTTTPLPADEQEW-RVRAASAGALVPDAVVDAARDLLAGRRGPGLSRYDGDLS 710 Query: 824 LPFTLPET------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR 877 LP+ V +L+ F P F Q L+V E + L Sbjct: 711 ASAGLPDHATGTPVVSPTSLESFAECPHAWFVQRLLRVQPLELPE-----ETVTISPLEI 765 Query: 878 YQINQQLLNALVE--------------------QDDAERLFRRFRAAGDLPYGAFGEIFW 917 + L+ LV + + R G + E+ Sbjct: 766 GTLVHACLDRLVRTSEALPANGAPWSAADRARLAEIFDTKAREAARRGATGHARLWEVER 825 Query: 918 ETQCQEMQQLADRVIACRQ----------------PGQSMEIDLACNGVQITGWLPQVQP 961 E +++ ++ D A R + + + + V + G +V Sbjct: 826 EALLRDLGRMLDDDDAWRASRGATVLASELTFGTDGAEPVRVAVPGGAVALRGSADKVDR 885 Query: 962 DGLLRWRPSLLSV 974 G + + Sbjct: 886 AGDGTLIVTDVKT 898 >UniRef50_B9R0C3 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R0C3_9RHOB Length = 1046 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 142/972 (14%), Positives = 256/972 (26%), Gaps = 140/972 (14%) Query: 147 AQWETGHLVEGLGEAQAWQAPL-WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPP 205 A W + A+ WQ L + +V+ + + R + Sbjct: 163 ADWSELAGLVPDDHARYWQITLDFLKIVQEAWPAHLAELGKMDPKARRSALIRREAQRIA 222 Query: 206 GLPSR--VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTR 263 P + V + G++ P + L+A+ + G I P L R Sbjct: 223 ATPPKGPVIVAGVTGSVPATAELLKAVAGLEQ-------------GVIVLPGLDLDLDDR 269 Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQEL 323 + S+ S Q LL G D L Sbjct: 270 SWEALGQRFVTGTRHGSDTKTPPPLSSHPQYSLKQLLDRLGVTRADVRAL---------- 319 Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQ 383 P ++L Q + E A + + ++++ + Sbjct: 320 -----DDPGDILSQRQRLVSEALRPADTSDGWTSYLDATPIEVRSAALNNVSLMTARNEA 374 Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 E L L +E T ++ D + + A + S R Sbjct: 375 DEALSLAIALREAIELGETA-----ALISPDR-----MLTRRVAAELARWNIQADDSAGR 424 Query: 444 ARQSH-PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 P + ++ L + D+LALL P+ AR + + +R + + I Sbjct: 425 PLDQTAPAILTILAA-KLALNGCEPIDLLALLKHPL--ARLGLPIKDIRAAARALERGVI 481 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 R L + E +D + L A L Sbjct: 482 RGERPRPGTDGLIMAVEACRAAAENAHTPRWKKVHEGD---------WDVIADLAARLQS 532 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 LA L + R + E ++ + V + + A+ A E Sbjct: 533 ALAPL-ENMAGDRDPVPVEHLVQAHVDVMQAISAD-ETGAADELYAAEAGEALAAFWSGL 590 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PVNICTLMPMRSIPFKVVCLLGMN 681 G AVP L+ + + + +R V I M R F V L G+N Sbjct: 591 LEAEASGLAVPPHEWPSVLSALMSGDAVRRRLPRDPRVQILGPMEARLQAFDFVILGGLN 650 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL------FLEALISAQQKLYISYIGRS 735 +G +P++ + K G +R L F + + +++ +S R Sbjct: 651 EGTWPQRTRNDPWLNRPMKRDMGLEPP---ERRLGAAAHDFAQGM--GAKRVLLSRAAR- 704 Query: 736 IQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ 795 D + S +Q L G + N A + Sbjct: 705 -ADGAPTVASRWLQRLTTLAGPEIAAGMEARGNRYSQLAALLDR---------------- 747 Query: 796 PGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQV 855 A A +P P+T+ + ++R P F + L++ Sbjct: 748 -------------QAGDVRPADRPAPKPPLGARPKTLSVTEIERLVRDPYAIFARHSLEL 794 Query: 856 NFRTEDSEIP---DTEPFILEGLSRY----------QINQQLLNALVEQDDAERLFRRFR 902 P D I + L+ + LL E + F R Sbjct: 795 QPVDPIGGEPGAADKGNLIHDALAEFLSTWTGPFDETAVTALLEIGEELFEPLDAFPAIR 854 Query: 903 AAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPD 962 A + E F + + + R + +E+ L ++ G ++ Sbjct: 855 ALWWPRFQRIAEGFVAFEAKRSLHVEKRFLEIGGG---VELKLPGLDFRLRGRADRIDLM 911 Query: 963 GLLRWRPSLLSV------AQGMQLWLEHLVYCAS-----------GGNGESRLFL----- 1000 Q L L A+ G+ L Sbjct: 912 SSGSLSVIDYKTGQVPSQKQVDALLSPQLPLEAAMIQRGGFKDVPAGDPVGELLYLQLKG 971 Query: 1001 RKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDD 1060 D + A L +LIE + + + + +L Q + Sbjct: 972 GTDAVLEVGRNPKDAA---LEELIEDAWQRLEQLIAHYAKEETGYLSRARVMQGRQIDGP 1028 Query: 1061 DSTLQKARTKFL 1072 L +A+ L Sbjct: 1029 YDHLARAQEWAL 1040 >UniRef50_Q9S3U7 Rep helicase n=2 Tax=Gammaproteobacteria RepID=Q9S3U7_LEGPN Length = 467 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 64/525 (12%), Positives = 137/525 (26%), Gaps = 83/525 (15%) Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE-QDVGNPLLAS 302 C YW + + + ++L R + P + Sbjct: 2 CMEYWQNKIRHLLVDEYQDSNSSQYLLVKKLAGVRAHFTVVGDDDQSIYAWRGAKP--EN 59 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 +L +D+ L + + + + IL N +A + Sbjct: 60 LAQLQKDFPRL-------KIIKLEQNYRSTS-------RILHAANHLIAHN---QHLFEK 102 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 + C Q E E + + D ++ Sbjct: 103 KLWSDLGHGELLRVVSCKDEQDEAEHVIAGFGRAINYVIGQKYSDYTILYR-----GNHQ 157 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 +F +PY IS ++ + + + L L + L + P + Sbjct: 158 ARIFEKVLRHHGIPYHISGGQSWFAKLEVRDIFAYLKLLCNEADDAAFLRAITTP----K 213 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 I E L L ++ GI D++ E A Q + + Sbjct: 214 RGIGESSLEALGRYAQSRGISLYHGSDHLALSEFVADKQRMIFHDFKLWMEDIKKRISSD 273 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 L +D + +L + R ++W+ F Sbjct: 274 SVLEHLRHDVDG-------------IDKLIFMNNVILPPRHKKKWIMYGS------FWNG 314 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNIC 662 L + W I + + + L ++ + Sbjct: 315 LIVCWIRNLNNRSWMLWIDWYWSIYWNNPMNLQVMWS--------------------QLM 354 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 TL + + F + L+GM + + P +++ + +++R L + Sbjct: 355 TLHASKGLEFPFIYLVGMEEELLPHRVSIDD-------------DQIEEERRLAYVGITR 401 Query: 723 AQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDE 765 AQ+ L + + + + PS + EL + G+ Sbjct: 402 AQKGLCFTLAKQRRRAGELQDCVPSRFLDELPQESLEWFGKGGER 446 >UniRef50_C7PL50 UvrD/REP helicase n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PL50_CHIPD Length = 1066 Score = 176 bits (445), Expect = 5e-42, Method: Composition-based stats. Identities = 111/914 (12%), Positives = 269/914 (29%), Gaps = 132/914 (14%) Query: 105 REDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQ---YLVYRPDWLAQWETGHLVEGLGEA 161 +++ +L + D + + QL K D F + YR D + + + + Sbjct: 106 QDNLSLFDKHSLDPVSELEKIQLLKKLIDGFTKDNPLKRYRGDVYFEMKNLAQLFSTMKK 165 Query: 162 QAWQA-PLWKALVEYTHQLGQPRWHRAN-------LYQRFIETLESATTCPPGLPSRVFI 213 + W + +A+ Y L A + + L + V Sbjct: 166 EGWTVDYINEAITAYIESLPSREDFIAKKAAGTYVRGDVRTDRIAREKEKMIRLQAAVEQ 225 Query: 214 CGISALPPVYLQALQALGKHI--EIHLLFTNPCRYYWGDIKDPAYLAK--LLTRQRRHSF 269 PVY + G++ ++ Y + D + L+ + S Sbjct: 226 F------PVYTAFMHTAGRYDFDDMINWVIGAFEEYPDLLADYREKYQYILVDEYQDTSG 279 Query: 270 EDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR--DYIYLLSD--LESSQELDA 325 L + VG+ + + G + + L ++ ++ + Sbjct: 280 TQNRLVQLLTEDQESPNI-----FVVGDDDQSIYRFQGASIENMALFAETFADNLHTIVL 334 Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQRE 385 + + ++ ++ + + E + ++ + E Sbjct: 335 THNYRSVQPILDVAMSLIANNGNSRLVNQLPELDKQLIAAIPAAQSPVPVIRRYNTSRDE 394 Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 + + ++ +L + + P I V+ + + Y + LP+ Sbjct: 395 MTDITQQIARLL--EKGIAPGRIAVIYRE-NKYG----EELARYCRQQQLPFYSKRSINL 447 Query: 446 QSHPVLEAFISLLSL----PDSRFVSEDV-LALLDVPVLAARFDITEEGLRYLRQWVNES 500 P +S+L D+ + +D+ ++L ++I + + E Sbjct: 448 FEVPFARKVLSILRYLACEVDTPYSGDDLLFSILHYDF----YNIPAIEVAKISIRAAEK 503 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 G R E + Q+ + TR L + Q Sbjct: 504 GYR-----------EKSSIRQYLQEWAHTRNLTLFTAAPEQALVD--------------- 537 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 ++++ +L L ++ + C + A P+ + + QA+ Sbjct: 538 ---FSAMMEKLIRDAHNLTLQQLFAAVINECGVLSYAMQSPEKPW------LMKVLQALF 588 Query: 621 AEG-LGAQYGDAVPLSLLRDELAQ-RLDQERISQRFLAG---PVNICTLMPMRSIPFKVV 675 + ++ D + R + I ++G +N+ T + + F+ V Sbjct: 589 DFVKEETHRNPDLTIAPFMDMVDLMRHNGITIPLVQVSGNETGINLLTAHGAKGLEFEYV 648 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD--RYLFLEALISAQQKLYISYIG 733 + G N ++ ++ + D+ R LF A+ A++ LYISY Sbjct: 649 FIAGANAYLWEEKVKNGSGFSFPDTLFTTTLTSTDEQELRRLFYVAITRAEKHLYISYPE 708 Query: 734 RSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 D PS+ V E++D +P + Sbjct: 709 YRT-DGKPLEPSLFVTEILDQHQ------------------------------LPVEKVI 737 Query: 794 YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRL 853 + +A A ++ + + L + P+ +++ + Sbjct: 738 IPEEVQFRFAALDYTPELAPEIAKTDQPLIDNLLANFVMNVTALNNYLDCPLGFYYKNLV 797 Query: 854 QVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLP-YGAF 912 +V + SE + + L + + ++ + + ++ F R L +F Sbjct: 798 RV--PSGRSENTEFGSAVHYALEK--LFLKMQESGRYEFPSKEEFIRDFTWSMLRNRESF 853 Query: 913 GEIFWETQCQEMQQLADRVIACRQPGQSMEIDLA-------CNGVQITGWLPQVQPDGLL 965 +E + + + + D P + + + NGV + G + +++ DG Sbjct: 854 TRESFERRLEYGRDILDHYYDTWLPHWNKVVSVERNIRSVVVNGVPLKGKIDKLEFDGN- 912 Query: 966 RWRPSLLSVAQGMQ 979 + Sbjct: 913 LVNVVDYKTGDYEK 926 >UniRef50_C2BJF9 Superfamily I DNA and RNA helicase n=4 Tax=Corynebacterium RepID=C2BJF9_9CORY Length = 1059 Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 121/923 (13%), Positives = 241/923 (26%), Gaps = 122/923 (13%) Query: 153 HLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVF 212 ++ L ++Q KAL+ Y R Y +E L+ + +V Sbjct: 201 ADIDNLDKSQKNGPEYSKALLGYIQT-----QERRVQYVPLLEALKKEQSE-----RQVI 250 Query: 213 ICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDR 272 G + + + + G + Y +L + S+ R Sbjct: 251 TFG------EQMAVAARVARDHPVV-----------GKQQSQRYKVVMLDEYQDTSYAQR 293 Query: 273 ELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPD 332 L + VG+P+ A +G G L+ + D Sbjct: 294 VLLRSLFGGD----QEDLSVTAVGDPMQAIYGWRGATSEN-LTAFVEDFPVAPGTSAPKD 348 Query: 333 NLLHNIQS--DILELENRAVAGVNIEEFSRSDNKRPLD-PLDSSITFHVCHSPQREVEVL 389 L + ++ L+L N GV D + I S RE E + Sbjct: 349 QLTTSWRNPSGALDLANSVAEGVFEGVERPVDELSAAPHKGEGEIQLAYFESEVREREFV 408 Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 + L E+ T V+V +P A +P I P Sbjct: 409 AEYLKEQWEKREGDTFS-AAVLVRKNRHSAPIAA-----ALDKAGVPNEIIGLGGLLWQP 462 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 ++ +++ ++ + LL P+ + ++ L S R Sbjct: 463 EIQDLVAIATMLVRPEDLPAAVRLLAGPIC----GLGISDIQAL-----ASRQRNLAGAR 513 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 R P + + + G ++ E + + + + Sbjct: 514 EERLRWEPGMDPEDYLRAQLEDVTAEEPDQRVGLADALADLGERDRYTPQGLARMEEVSA 573 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 +L R + +PL + + N A A ++ I+A G Sbjct: 574 KLRHLRT-YSLSKPLVDIFADIEALFNIRTEVLARGSAGGATHLDKFADIVAGFHGDSLY 632 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ- 688 + L E LD + V I T + + ++ VC++ + Y + Sbjct: 633 ALLDYFALALEKEDGLDLGEVPA--ATDRVQIMTAHKAKGLEWEHVCVVHADSSSYSAKA 690 Query: 689 -----------------------LAPLGFDLMSQKPKRGDRSRRDDD-RYLFLEALISAQ 724 F ++ K+ D + + ++ LF AL + Sbjct: 691 ETFLSRIDKVPGDDDYIEVPEDAQKRSHFQNACEEFKKADSAIKAEESARLFYVALTRTE 750 Query: 725 QKLYISYIGRSIQDNS-ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 L ++ G + + ++ P ++ L + Q ++ Sbjct: 751 STLTVTGSGTNNLNGKNKKAPYEYLERLKEQFPQYVVEWSVPDEPSEDDFGESAQFPALQ 810 Query: 784 HTRMPFDP--------QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF-TLPETVPL 834 + + R W A + + QP+ LP + Sbjct: 811 ASPEAVAGADLVLEAMEELPDLSRGETFELWEQEAGALIEEYKALQQPVVDVELPSELTA 870 Query: 835 ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDA 894 + A P++ F + + R P+ R L Sbjct: 871 SDMVALRADPLQ-FARRQ-----RRPVPFKPN------SYAKRGTAFHAWLEDRFGSPA- 917 Query: 895 ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD-RVIACRQPGQSMEIDLACNGVQIT 953 +LP E + + + + ++ + Sbjct: 918 ------LLGEEELPG--IDEPEDFDLEELKEAFLNSEWAERQPEHVEAPFEITIGESVVR 969 Query: 954 GWLPQVQPDGL-----LRWRPSLLSVAQGMQLWLEHLVYCA------SGGNGESRLFLRK 1002 G + V + W+ + M L A GG F Sbjct: 970 GRMDAVFRLEDGTWMVVDWKTGRPPQGEAMDAAKIQLAVYAEAWRRIHGGEKIRAAFYYV 1029 Query: 1003 DGEWRFPPLAAEQALHYLSQLIE 1025 + F P + L +L+E Sbjct: 1030 HDGYTFEPARLPRGEE-LKKLLE 1051 >UniRef50_C5VEC6 ATP-dependent DNA helicase n=2 Tax=Corynebacterium matruchotii RepID=C5VEC6_9CORY Length = 1095 Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 109/807 (13%), Positives = 210/807 (26%), Gaps = 117/807 (14%) Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLES 319 L R + ++ + LF VG+P+ + +G G L+ + Sbjct: 273 LRNRYKVVMLDEYQDTSHAQRMLLRSLFAGGAVTAVGDPMQSIYGWRGA-TAANLNRFVT 331 Query: 320 SQELDAFVDVTPDNLLHNIQS--DILELENRAVAGVNIEEFSRSDNKRPLDPLD----SS 373 +D + L + ++ ++L L N V + +PL Sbjct: 332 DFAIDPQEPAVKNELTISFRNPPEVLHLANAVATTVLGAPSDPNRPVQPLSSPPSAVAGD 391 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I + E E + D L + T P V+V P + R Sbjct: 392 IQLGYFPTIADEREFVADTLAELYNNRDTAKPFTAAVLVRQNAHTGPIAKE-----FQRR 446 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY I P + +++ ++ S L +L P + + ++ L Sbjct: 447 GIPYEIVGINGLLDVPEVADMVAVATMLIRPTDSAAALRILGGPAV----GLGVRDIQAL 502 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + E R G+ +L E+ G ++ E Sbjct: 503 ARRAGELSGRATSGKATDSVDPAVKLGEEIAE------VLAADAENIVGLTDAIADLGEP 556 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 E L L QL R+ +A L + ++ + + Sbjct: 557 EKYSEEGYRRLGRLSSQLRRLRQTVAAGSSLPDLFAEIERVMGIRTEVLSRENPRLDGAV 616 Query: 614 QQ--WQAIIAEGLGAQYGDAVPLSLLRDEL------AQRLDQERISQRFLAGPVNICTLM 665 + E LS L D L+ + R V I T+ Sbjct: 617 GTIHLDKLHQEVANFATIPNTTLSQLLDYFTEARCQESGLELGEVQVR--NDRVQILTVH 674 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPL--------GFDLMSQKPKRGD------------ 705 + + + VC+L N+ Y + A L + GD Sbjct: 675 KAKGLEWNTVCVLHANNRDYDKTRASTWLTNPAMVPSTLRGDAAESGDTVGSPVLDTSWL 734 Query: 706 -----------------RSRRDDD-RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 R ++ LF A+ A Q+L ++ + S Sbjct: 735 ENRAQLEAECAAHIEEFRQSLSEESTRLFYVAVTRAAQRLIVTASALDDNERDTEPCSNF 794 Query: 748 V----QELIDYIGQSHYLPGDEALNCDESEARVKAHLT--CLHTRMPFDPQNYQPGERQS 801 + D I H A + + + V+ T D R++ Sbjct: 795 LLIKRNASTDSIVAWHDPAEAAATDTSDEPSEVQQSPTGMFPKPTKTVDLLTGADLVRKA 854 Query: 802 YARE-----------------WLPAASQAGKAHSEFVQPL-PFTLPETVPLETLQRFWAH 843 A++ W + + + + L + + + Sbjct: 855 IAQQSVGDPIAFNQDNDLFQLWEKDVTALIEEYQRLQSDIVEVELSPELTATDIVALKQN 914 Query: 844 PVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRA 903 P F + + R P+ R L Sbjct: 915 P-EQFARRQ-----RRPVPFKPN------RYAKRGTEFHSWLEQRFGAPTLLDESELPGM 962 Query: 904 AGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDG 963 ++ G E+ + A + +++ +G+ I G + V D Sbjct: 963 DEEITPGQLQELKDKFV-------AGQFADRTPMFVEQPFEVSIDGIVIRGRMDAVFRDE 1015 Query: 964 L----LRWRPSLLSVAQGMQLWLEHLV 986 + W+ L M+ + L Sbjct: 1016 SGWHIVDWKTGQLPSRADMRYLMMQLA 1042 >UniRef50_Q98PF5 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma pulmonis RepID=Q98PF5_MYCPU Length = 741 Score = 175 bits (444), Expect = 8e-42, Method: Composition-based stats. Identities = 65/516 (12%), Positives = 160/516 (31%), Gaps = 74/516 (14%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIY 312 +P K ++ ++ + E + + VG+P + G D Sbjct: 221 NPKVRKKWESKFEYVLVDEFQDTSPLQYEILKVIAKNAYLTIVGDPDQTIFWWHGADINI 280 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILE---LENRAVAGVNIEEFSRSDNKRPLDP 369 L+ F P+++ ++ + + + A + + + N Sbjct: 281 FLN----------FEKDFPESMKIKLEQNYRSTKKILDAANKLIAKNKRRLTKNLFTEKE 330 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 +I F+ + E + ++ ML++ + ++I+++ + Sbjct: 331 EGEAIEFNHAFNIDAEARWVVTKI-NMLKKQK-VQLKNIVILYRS-----SHVSRALEQQ 383 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + + I + ++ I L S + LA + +L + ++ Sbjct: 384 LVKENINHQIVNGTKFFEKKEIKNLIYFLKTIYS----ANTLAFYNT-LLFFVRSLAKKD 438 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L + + +++ +TR+ Sbjct: 439 LDEVLHQAAAA-------------------KLSLYKYIITRI------------------ 461 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA--FFLPDAETEA 607 E+ GL A+ SLL + +++ L E+ + + L F+ Sbjct: 462 KTENLGLSAKTRKETISLLKTIVKFKKLLKNEKHEANYSWIFDAFLKEVKFYDLINYDRD 521 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVP-LSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 I+ + Q + LS +++ L RI + +++ T+ Sbjct: 522 DENAIQDNVYEFLTLLQKWQEENPSSELSKFFEDI--ALYSNRIDESAGNNFISLMTIHN 579 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F V ++G+N+ + P A D + +++R + AL A+ K Sbjct: 580 AKGLEFDYVFIIGLNENILPSAKALYSKDGSINY------DKLEEERRIAYVALTRAKTK 633 Query: 727 LYISYI-GRSIQDNSERFPSVLVQELIDYIGQSHYL 761 ++IS G + S + E+ + Sbjct: 634 VFISDARGIDPYSKEPKKTSRFLTEMGISLEDHVQE 669 >UniRef50_C8P127 ATP-dependent DNA helicase PcrA n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P127_ERYRH Length = 715 Score = 175 bits (443), Expect = 9e-42, Method: Composition-based stats. Identities = 53/496 (10%), Positives = 142/496 (28%), Gaps = 92/496 (18%) Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN 347 + + VG+P + G + +++ F P++ + + ++ Sbjct: 237 DENQLYVVGDPDQTIYTWRGANVDFIID----------FDKKYPESETITLNQNYRSTQH 286 Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSS---ITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 + + + ++ + L S + + E + +R+L + D + Sbjct: 287 ILDSANTLIKNNKDRPDKALYANKESEFPVQYATLDDGDAEAYWVANRMLELH--DEGHS 344 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 D+ V+ ++ R +PY I ++ +S L + Sbjct: 345 YLDMAVLYRS-----NYLSRALEKVLMARRIPYVIYGGLRFYDQAEIKDMMSYLRMITHG 399 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 L + R I E+ L + Sbjct: 400 DDLA-----LRRSIAMPRRGIGEKTLDTIM------------------------------ 424 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE--R 582 R + Y Q P + + +M + +R + Sbjct: 425 LQAREREMTMYESMLYDVHHQQATP-------------KIRNYVMMIEDFREMAQEASIE 471 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 + +++ + F E + +E + I + + L ++ Sbjct: 472 TIMQYVLKRSGLREHF-----EKIQELERVESLKELIGDALTFQENYENPSLDEYIQMVS 526 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 D+ + + V + T+ + + F+ V ++G+ D ++P + + Sbjct: 527 LYGDKSEVVEGEY---VRLMTVHAAKGLEFENVFIMGLADNIFPNKNSI----------- 572 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYI-GRSIQDNSERFPSVLVQELIDYIGQSHYL 761 + ++R L A+ A+++L++S G + S ++E+ ++ + Sbjct: 573 QEGSGGIQEERRLMYVAITRAKERLFLSNNIGYNFVAGGYARASRFIKEM--HLDEKTSE 630 Query: 762 PGDEALNCDESEARVK 777 Sbjct: 631 MEATPTISRSEVQDAI 646 >UniRef50_A0JYL5 UvrD/REP helicase n=4 Tax=Actinomycetales RepID=A0JYL5_ARTS2 Length = 1183 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 105/787 (13%), Positives = 200/787 (25%), Gaps = 133/787 (16%) Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED-------PTLTPRDIIVMVA 413 + + + + + E + +L D + P + V+ Sbjct: 404 PPLQPSPAAAEGKVVIGRFATDEDEARAIAADVLRYRLTDFEEPVGADRVAPA-MAVLCR 462 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 R +PY I P + ++ L + S+ ++ L Sbjct: 463 RRAQ-----MECVRREFELRGIPYEIVGLGGLLDTPEIVDLVATLRVLADPGRSDSLMRL 517 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 L AR+ I L R W + R G + E + P + L+ Sbjct: 518 LA----GARWRIGPADLMAFRDWSSFLARRRGNPRTDADEADDPDAAVIESDITDSPSLV 573 Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD 593 + W L + L +L +L R + + V R Sbjct: 574 EALDWLPREGW----TSAHGRTLSPAALDRLHALSAELRQLRGFMGDDLT-TLLGEVERA 628 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD-AVPLSLLRDELAQRLDQERI-- 650 ML + + + A G + V + L +E Sbjct: 629 MLLDIEVAARPGVSIH-QARRNLDAFHDAAAGFLHTSHRVDVLAFLAWLEAAATEEGGLD 687 Query: 651 --SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR--GDR 706 + V + T+ + + + VV + G+N G +P + P GDR Sbjct: 688 VAAPEVNHEAVQLLTVHASKGLEWDVVFVPGLNAGAFPSSRDSRWSSGSAALPWPLRGDR 747 Query: 707 SRR-----------------------------DDDRYLFLEALISAQQKLYISYIGRSIQ 737 + ++R L A A+ L++S Sbjct: 748 ADLPQWDTDQPDQKGWLDAEKNFKADVQAHGEAEERRLAYVAYTRAKFVLWVSSAAWVGS 807 Query: 738 DNSERFPSVLVQELIDYIG-------------------------QSHYLPGDEALNCDES 772 S + EL G + + + Sbjct: 808 RAGMAEMSPFLSELAPLAGIGAGEAETVAAEGSTRGRTEAAAGTAAVVHAASVEESLVPA 867 Query: 773 EARVKAHLTCLHTRMPFDPQNY----QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 E+ + L H P+DP + G R A A E + P T Sbjct: 868 ESPLTQDLELAHW--PYDPLEGPADPRTGARLRLVPGRRAAMEAAAGRVREALAAGPDTE 925 Query: 829 PETVP-----LETLQRFWAH---PVRAFFQMRLQVNFRTEDSEI--PDTEPFILEGLSRY 878 P L+ F A+ + R + + F+ G Sbjct: 926 PAADSDAGEGPRQLRSFAANWAKEADLLLERRHRRATVQDVHLPGHISASTFVDLGDDPA 985 Query: 879 QINQQLLNAL-VEQDDAERLFRRFRAAGDLPYGAFGEIFWET-------------QCQEM 924 + +L + E + R F A + +G G + + + Sbjct: 986 AVLARLRRPVPREPGMSARKGTAFHAWVEEHFGKAGMLELDEAPGSDSHIDEAYGLDSMV 1045 Query: 925 QQLADRVIACRQPGQ-SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW-- 981 + + A R P + ++ V + G + V D W + Sbjct: 1046 ETFRNSEWAHRAPAHVEVPVETRIGEVVVRGRIDAVFRDADGGWDLVDWKTGRRPAAGQL 1105 Query: 982 --------LEHLVYCASGGNGESRL-----FLRKDGEWRFPPLAAEQALHYLSQLIEGYR 1028 + L + G + ++ ++ R L + L ++ Sbjct: 1106 KVKAVQLAVYRLAWARLKGVPLDSVRAAFYYVGENQVVRPHDLGTAE---QLEDIVTAAL 1162 Query: 1029 EGMSAPL 1035 G +A L Sbjct: 1163 GGTTALL 1169 >UniRef50_C7M335 UvrD/REP helicase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M335_ACIFD Length = 715 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 63/466 (13%), Positives = 126/466 (27%), Gaps = 74/466 (15%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILE-LENRAVAGVNIEEFSRSDNKRPLDPLDSSI-- 374 + F + + ++ + +A I + R K L Sbjct: 258 ADPSGVLTFEERFDGAKVVTLEQNYRSTNAILGLANAVIAKNRRRYAKHLFSELGEGTPA 317 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + + E + + L+ + P +I V+ P A ++ Sbjct: 318 RRYQATDERDEARWVAATVREFLQRG-GVDPSEIAVIFRTNAQSRPL-----EEAFSEAG 371 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P+ + + ++ L + + + +L+VP R I L+ Sbjct: 372 IPFRVVGGVRFYERREVRDLLAYLRVLANPDDDVALARILNVP----RRGIGRGTEEALQ 427 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 G R +L + Sbjct: 428 AAAALRG----------------------------RSMLSLLRAEGVEVL-------GLT 452 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 + L+ +L LA E + + + E + + Sbjct: 453 SRQERALRGFVELIDRLGA----LASLHRPSELIDAVVAETSYLEHLNEEDPITLEGRLE 508 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 + A A L L + + + A V + T + + F V Sbjct: 509 NIAELRASAAEAD--------DLESFLERAALVSAVDEVMGASGVTLLTAHAAKGLEFDV 560 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V ++G+ +GV+P A + D +++R LF A+ A+ L ++ R Sbjct: 561 VVVVGLEEGVFPHVRAIV------------DAEAVEEERRLFYVAMTRARTTLVLTSARR 608 Query: 735 SIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 PS + EL + + P C ES R A Sbjct: 609 RASWGEPLYNPPSRFLDELPADLVATTAAPVAVGTACAESIQRASA 654 >UniRef50_B2A3D2 UvrD/REP helicase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A3D2_NATTJ Length = 754 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 66/470 (14%), Positives = 146/470 (31%), Gaps = 95/470 (20%) Query: 303 WGKLGR-------DYIYLLS-DLESSQELDAFVDVTPDNLLHNIQSD------ILELENR 348 G R D+ + + + + + F PD L ++ + IL+ N Sbjct: 351 LGSQSRNITVVGDDFQSIYAFRGANWENILLFPQNYPDAKLIKLEKNYRSHNKILKFANE 410 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 V I ++ L F +S + E E + +LA+ + + +D+ Sbjct: 411 IVDSAQIGYQKHLSSEFHEGTLP---QFIKYYSQEEEAEAIVSEILAL--REQGFSYKDM 465 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V+ + +IQA R +PY + ++ +S L L + + Sbjct: 466 AVLYRA-GFHGNYIQA----ELLRRKIPYVVYGGIKFMERKHVKDLVSYLRLTVNPIDAV 520 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 L I + + + E R Sbjct: 521 SWNRFLK-----MIPGIGRVRASQIVEEITEQDGR------------------------- 550 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 L + ++S+L E L ++G++ + + Sbjct: 551 ----LNFNNFKGTSYYKSLLSLQEV----------------LLEAGKKGISPSNSVARII 590 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAI--IAEGLGAQYGDAVPLSLLRDELAQRLD 646 +L + +E + + ++ Q + + L + P + + E L+ Sbjct: 591 EYYYPILEKQEVDASERKNDLEVLYHLSQNYSELEQFLADLSLEP-PANKFQQETTPALN 649 Query: 647 QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR 706 + + I T+ + + + V + + DG++P + D Sbjct: 650 EAEDD-----DSLVISTIHSAKGLEWNTVFIPHLLDGLFPSSKS------------LRDP 692 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQD-NSERFPSVLVQELIDYI 755 +++R LF A+ A++KLY+S + + PS +++L Sbjct: 693 FILEEERRLFYVAITRAKEKLYLSMPHQVVSYNGYFIQPSRFLKDLDPAC 742 >UniRef50_C3JKU1 UvrD/REP helicase domain protein n=6 Tax=Corynebacterineae RepID=C3JKU1_RHOER Length = 1130 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 104/774 (13%), Positives = 200/774 (25%), Gaps = 131/774 (16%) Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS--DILELENR 348 VG+P+ + +G G L + L LL + ++ + LEL N Sbjct: 318 ALTAVGDPMQSIYGWRGASAAN-LPRFATDFPLANGKPAPTLELLTSWRNPPEALELANL 376 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP--TLTPR 406 + A + + S + + + + ++E + + +++ E Sbjct: 377 SSAPLRRRGVAVSTLRARPGAVAGDVRLALLGDLEQERQWVAEKIAEEYEAARAEDRPTP 436 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 V++ +P + A + LP + P + I++L + Sbjct: 437 TAAVLIRRNADAAPLAE-----ALRSKGLPVEVVGLGGLLHTPEVADVIAMLRVVADPLA 491 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 + LL AR+ I + L L Q E I G T Sbjct: 492 GSAAVRLL----TGARWQIGAKDLAALSQRSRELAISAGYGTAG------AVTDAEALTS 541 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP--L 584 + L G G S+ + A + ++ +L R + Q + Sbjct: 542 AVQDALPGE-NAEQAGLVDSISDPGPAERYSALGYTRINAIAAELASLRERIGQPLTELV 600 Query: 585 EEWLPVCRDMLNA-----FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 E V + A + + A + + Sbjct: 601 AEVERVLGIGIEAGARTRVGVVGTAGREHLDAFADVVANYATR-PTANLPGMLAFFAAAE 659 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 ++ + L + V I T+ + + ++VV + ++DGV+P A + Sbjct: 660 QIEKGLTPGEVEVAP--DRVQILTVHSAKGLEWEVVAIPHVSDGVFPSSTASGSWLGALA 717 Query: 700 KPKRGDR----------------------------------------SRRDDDRYLFLEA 719 + R R D+DR LF A Sbjct: 718 ELPPSLRGDRAVDADSADGVPVLDLEELYNRKDLENAITAHKKALSNRRLDEDRRLFYVA 777 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD------------EAL 767 L ++ L+IS + + + PS + EL + + + Sbjct: 778 LTRTERALFISAHHWAESGSEPKGPSEFLDELHQMVTAENDADEEDSRGAIGVVEEWAPA 837 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG------------- 814 ++E + A P DP + G ++ A L A + Sbjct: 838 PEPDTENPLAATPRTAQW--PPDPLGARRGAVEAGAASVLSALASLPQDSQEAEEPEDDP 895 Query: 815 ------------KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 + + LP + + L A P L R Sbjct: 896 ENWASDVDVLLAEREARANARAEVILPAQLSVTQLVDLKADPDE------LAARLRRPLP 949 Query: 863 EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGA-FGEIFWETQC 921 P+ R + R +LP A G Sbjct: 950 YPPNPL------ARRGTAFHAWIERRFGA-------TRLLDLDELPGAADTGAGPETDLV 996 Query: 922 QEMQQLADR-VIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSV 974 + + + + G + G + V D W Sbjct: 997 KLQDAFLRSPWANRSPIEVEVPFETSIAGTVLRGRIDAVFADPDGGWTVIDWKT 1050 >UniRef50_B2WB64 ATP-dependent DNA helicase pcrA n=2 Tax=Pleosporineae RepID=B2WB64_PYRTR Length = 851 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 61/495 (12%), Positives = 143/495 (28%), Gaps = 52/495 (10%) Query: 295 VGNPLLASWGKLGRDYIYLLS---DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 VG+P + + + LL D S ++ + + + ++E + Sbjct: 239 VGDPDQSIYSFRSAEIKNLLRMRTDYPESVVINLENNYRSSGCILSSAMAVIEQDESRPQ 298 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL-TPRDIIV 410 + + T S E + + + L + D + Sbjct: 299 KALVATHGIGEQP----------TLRHLISANVEARWIVEEIHRTKTLTAGLLSFNDYAI 348 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 +V + A +PY + ++ + L + ++ V Sbjct: 349 LVRS-----SPLTLQIERALGQAGIPYRMVAGTKFFDRAEIKIILDYLRVISQPDHNDAV 403 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 +++VP + + ++ L + E+ +R V ++ Sbjct: 404 ARVINVP----SRKVGDVTVKAL---LEEAEVRKVTLWKLVLDVAQGRRKPQCKVSAQAN 456 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 + + + + +LP + +L G + +L ++ ++ L Q E W Sbjct: 457 IGISQFVNVILTSREKLLP---AKSDECDLFGLIMHVLNKI-AFQSYLKQAHK-ENWQDR 511 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQER 649 + + + A+ E+ + E G + LL LA L Sbjct: 512 WAN-VEELINQATQMATAVANGEEISDDALPEVEGLEQRSDTAADLLSKFLANVTLSSAA 570 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 V I T+ + + + VV + + DG P A + Sbjct: 571 DQDGSELDQVTISTIHAAKGLEWPVVFMPAVYDGSIPHSRAED----------------Q 614 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE--LIDYIGQSHYLPGDEAL 767 D++R L + AQ LY+S + S + + + + + Sbjct: 615 DEERRLLYVGMTRAQGLLYLSCPVKQSGQEQTTL-SRFISDRKIQKLFNERGPDLAFKRS 673 Query: 768 NCDESEARVKAHLTC 782 + ++ + Sbjct: 674 TIPDLARILRRNCPT 688 >UniRef50_A6TQ92 UvrD/REP helicase n=2 Tax=Alkaliphilus RepID=A6TQ92_ALKMQ Length = 678 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 57/489 (11%), Positives = 139/489 (28%), Gaps = 91/489 (18%) Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLH------NIQSDILELENRAVAGVNIEEF----- 358 L + Q + +F P +L+ Q L + R+ + Sbjct: 239 LQNLFVVGDDDQSIYSFRGANPQIILNFHDIYPKAQKITLNMNYRSQENIIKSANQLIKQ 298 Query: 359 ---SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 P +S I + + + E + + ++ + +DI ++ Sbjct: 299 NKCRVEKQIIPTVKANSEIQYSEPKNREEENRTICQFIELLMS--EGYSYKDIAIIYRT- 355 Query: 416 DSYSPFIQAVFGSAPADRYLPY-AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 + + DR +P+ + H + + I+ L + + + ++ ++ Sbjct: 356 ----NLLAGSLVDSLLDRNIPFVSRDHIYNVFEHWIAKDIIAYLKGAFNYYDYDSLMRII 411 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + P + + Y + ++ ++ + + + + + ++ T+ + Sbjct: 412 NRPTRYITKNAMRKAQTYHKDFITALKVKGELMPYQNKNIADLSYHLNNIKYLTTKEAIK 471 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 Y + + AE L+ LN Sbjct: 472 YIRKDIGYD-------RHIENYCAEKRIRCEGLIETLNEL-------------------- 504 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 E + I+ I + L Q+ R Sbjct: 505 --------EEASSRHEKIDGFLTHIKD-------------------MKSSLSQKSF-HRT 536 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 V + T+ + + +KVV +LG +GV P + +++R Sbjct: 537 EEEQVELLTMHSAKGLEYKVVIILGAIEGVIPHHKSMDTL------------EDIEEERR 584 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 LF A+ A+++LYIS PS + E+ + + + Sbjct: 585 LFYVAMTRAKERLYISSSLIR--YEKPTEPSRFINEIRQNDNKKGSFVIGQEVEHKTFGK 642 Query: 775 RVKAHLTCL 783 + ++ Sbjct: 643 GLIEQISEK 651 >UniRef50_D1X726 UvrD/REP helicase n=22 Tax=Streptomyces RepID=D1X726_9ACTO Length = 1165 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 137/1108 (12%), Positives = 263/1108 (23%), Gaps = 182/1108 (16%) Query: 22 ERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMFVR-----V 76 R DP ++L S A L+ ++ + G A SF + + + Sbjct: 30 RVNRGADP-ARVLVLTFSRKAAVELRDRMAARLGAARGPQATTFHSFCYALVRAHQDADL 88 Query: 77 LPEI------PKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYL--TDDSDKRKLFQLS 128 + P++ ++ ++ +L L LR L +D+ + Sbjct: 89 FADPLRLLSGPEQDVTVRELLAGQLDLEKAGLAHVRWPDELRSCLTTRGFADEVRAVLAR 148 Query: 129 SKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRAN 188 S+ L PD LA + A + A L HRA Sbjct: 149 SRELGL-------GPDALAAFARRTGRPDWSAAAQFLAEYLDILDAQGVLDYAELVHRAV 201 Query: 189 LYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYW 248 L E E V++ P ++ L AL + Y Sbjct: 202 LLAERPEVAERLAGSY----DAVYVDEYQDTDPAQVRLLHALAGNRGRT-------PEY- 249 Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR 308 + R + G+P + + G Sbjct: 250 -----TRGRGEEGRGDGGRGDGGRGEEARAGGARSEAARGGRTLIAFGDPDQSIYTFRGA 304 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHN-------IQSDILELENRAVAGVNIEEFSRS 361 D +L ++ + D D P +L + + L R + R+ Sbjct: 305 DVNGILDFPDAFRRADG--DPAPVGVLTTSRRSGAGLLAATRLLTRRMPLTRLPADMVRA 362 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 + + + E+E + D LL + + +++ V+V P Sbjct: 363 HRDPAAVRDGGRVETYTYPTASTELENIAD-LLRRAHLEDGVPWQEMAVLVRAGGRSLPA 421 Query: 422 IQAVFGSAPADRYLPYAISDR-RARQSHPVLEAFISLLS---------LPDSRFVSEDVL 471 ++ A +P + + P + ++ L L D D Sbjct: 422 VR----RALTSAGVPLEVDGDDLPLRHEPAVAPLLTALRTVATAALRGLLDGDRDEADGA 477 Query: 472 ALLDVPVLAARFDITEEG-------------LRYLRQWVNESGIRWGIDDDNVRELELPA 518 + + + G G D Sbjct: 478 DRDEADGAGRDEAGGADPGETGGAYQGDTAGADPGETAGADPGETGGADPGETGGAGRAG 537 Query: 519 TGQHTW------------------RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 +W L R+ E + P DE Sbjct: 538 ARMSSWLDTETALTLLTSPLGSMDAADLRRLGRALRDEERAAGIRVPAPSDELLARALAE 597 Query: 561 VGHL-----------ASLLMQLNIWRRGLAQERPLEEWLPVCRDM------LNAFFLPDA 603 L L L R L EE L + L L Sbjct: 598 PERLVTHDPAYAHGAQRLGALLRKARELLEGGGTAEEALWALWNGTPWPGRLERAALRGG 657 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQY-GDAVPLSLLRDELAQR--LDQERISQRFLAGPVN 660 A+ A+ +E+ + + V Sbjct: 658 AGGRNADRDLDAVCALFETAARAEERTGGRGALNFLEEVDAQDIAADTLSRRTARPDAVR 717 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ------KPKRGDRSRRDDDRY 714 + T + + +++V L G+ +G++P + + ++R Sbjct: 718 LMTAHRSKGLEWRLVVLAGVQEGLWPDLRRRGSLLEADRIGGDGLAEPLTPGALLAEERR 777 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 LF A A+ +L ++ + D PS + EL + Sbjct: 778 LFYVAATRARDRLVVTAVKAPADDGD--QPSRFLTEL---------GVEPRDVTGRPRRP 826 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF-------- 826 A L DP + + R AA + P+ Sbjct: 827 LAVAALVAELRATTVDPAASEALREAAAHRLARLAALTDDEGQPLVPAAHPYRWWGLEEP 886 Query: 827 ----------TLPETVPLETLQRFW-AHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 P T+ L + ++ F ++ + Sbjct: 887 TRSAVPLRDRDQPVTLSGSALDQLANTCALQWFLGREVKADAPATA------------AQ 934 Query: 876 SRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFW--ETQCQEMQQLADRVIA 933 + L + + L + G + W E + + + +R + Sbjct: 935 GFGNVVHVLADEVASSRTPADLDVLMERLDSVWNGLAFDAPWKSEQEKDQARAALERFLH 994 Query: 934 C----------RQPGQSMEIDLACNG--VQITGWLPQVQPDGLLRWRPSLLS------VA 975 ++ L V+I G + +V+ D R Sbjct: 995 WHVLDRGGRTPTASEHDFDVTLEAGEYAVRIRGSMDRVEQDAEGRAYVVDFKTGKGAPTK 1054 Query: 976 QGMQLWLEHLVYC-ASGGNGESRLFLRK 1002 + + VY A +F + Sbjct: 1055 DEVASHPQLAVYQLAVREGAVDEVFDGR 1082 >UniRef50_Q6BW47 DEHA2B14410p n=3 Tax=Saccharomycetaceae RepID=Q6BW47_DEBHA Length = 934 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 74/530 (13%), Positives = 159/530 (30%), Gaps = 66/530 (12%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 + D + Q + F R N + + D A K +++ Sbjct: 248 LVDEFQDTNEIQLQLMYEFAKGHPTNPRLQNNITIVGDPDQSIYAFRDAQAINFKKMKEH 307 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR--AVAGVNIEEFSRSDNKRPLD 368 + S + + + DIL + + + +S Sbjct: 308 YKKIYQDNSINVITLEENYRSTS-------DILNFSEKIMRQQDDRLSKTLKSQMVSSFR 360 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL-TPRDIIVMVADIDSYSPFIQAVFG 427 P+ S++ SP++E + ++ ++ ++ +DI V+V + Sbjct: 361 PVYSNLK-----SPEQEARWISYQIEHLMALPNSIFKYKDISVLVRS-----AYQTRTIE 410 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + + +PY + A + + A + L + S L ++ P + I E Sbjct: 411 NEFVRKRIPYVMVRGTAFWNRKEVVAILDYLRVIASDNDRIAYLRTVNFP----KRGIGE 466 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW-------RFGLTRMLLGYA-MES 539 + L + + I+ I V + + +T + L + L A M Sbjct: 467 KTLASISAELEMEAIKPDIYKRQVYSVLQDISNVNTSVKLTSKNQSSLKKYLGFIADMRD 526 Query: 540 AQGEWQSVLPYDESS-----GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 + + ++ L+ L L+ + ++ + E + + Sbjct: 527 ILEDVNKISYEEQVGSDSTIEKRNTLLSKLFELVYVKSGLQKEFQNDPNHELNIMEVQTQ 586 Query: 595 LNAFFLPDAE--------TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 L F D E + I + ++ Sbjct: 587 LCEFTPKDEELPLYLGGSESDITEDKRNFLEKFIQSIGLYETDSTNEKEKEKEI------ 640 Query: 647 QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR 706 R R G V + T+ + + + +V + G++DG+ P + A G Sbjct: 641 ALRFPGRIDKGKVALSTIHGSKGLEWPIVFVPGLSDGILPAKFAMDT----------GGE 690 Query: 707 SRRDDDRYLFLEALISAQQKLYI-SYIGRSIQDNSERFP----SVLVQEL 751 +++R F A + LY+ SYI + R P S + L Sbjct: 691 EAVNEERRCFYVATTRTKLLLYMSSYIEQGDIGKWGRKPIDSVSRFISNL 740 >UniRef50_A4W0M6 ATP-dependent helicase/deoxyribonuclease subunit B n=6 Tax=Streptococcus suis RepID=ADDB_STRS2 Length = 1088 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 111/951 (11%), Positives = 255/951 (26%), Gaps = 169/951 (17%) Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSW-KLMTLL--------PQLLEREDFTLLR 112 + P S ++M +VL +P+++ F+ + +L L L + + Sbjct: 32 YIAPNSLSFEMERKVLEYLPEQATFDIIVTRFGQLARYLMIDRKEAGQPLDDVGLAMIFF 91 Query: 113 HYLTDDSDKRKL--------FQLSSKAADLFDQYLVYRPDW-LAQWETGHLVEGLGEAQA 163 L+ D F ++ L+ + + R + + E + Sbjct: 92 RVLSQFEDGDLKVYGRLQTDFGFINQLVALYKE--LQRANMSILDLEAMDSPDK------ 143 Query: 164 WQAPLWKALVEYTHQL-GQPRWHRANLYQRFIETLESATTCPPGLPSRV-FICGISALPP 221 QA L K + T L + H++ L Q + L L + V + G S Sbjct: 144 -QADLVKIFLAVTDILSKEGFEHQSKLAQ--LTGLVETGQLDEQLKNIVLVVDGFSRFSA 200 Query: 222 VYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSE 281 + AL + + L+ + Sbjct: 201 EEEALVSALNERVSEILIGVYASK------------------------------------ 224 Query: 282 NAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD 341 GN A+ D++ LS ++ + Sbjct: 225 -----KAVQATYAEGNVYQANV-----DFLRQLSAQFQTKATYIGQEP------------ 262 Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 +L+ + + I + + EVE + + + + Sbjct: 263 VLDSIGKFSKNMEAYYDYSGTMIDLTPADQEKIQLWEVVNQKEEVEQVATAIRQHVHQ-- 320 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 +DI++++ D+DSY I +F +PY HP++ SL L Sbjct: 321 GARYKDILLLLGDVDSYKLQIGKIFDKYD----IPYYFGKAEEMSHHPLVHFVESLERLR 376 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 RF +ED+L LL + A I+++ L ++ + ++ R + Sbjct: 377 RYRFRAEDLLNLLKSGLYA---SISQKELDLFESYILFADMKG--QAAFSRAFSVNGRAD 431 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 + + L+ + + P ++ + L L + + + Sbjct: 432 YDAEVIKEKRLVYDLTVLEPLRAKIMEPLNQLFKAGPQSGTAL---LEKFMAFLEAIDLP 488 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + +E+ ++ + + + + ++ + + + L Sbjct: 489 KNMEKMSRNLSEV----------EQEKEEQVWKSFTHLLENFHQIFGKEKLKMDDFLAIL 538 Query: 642 AQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 + VN+ + + K V +GM +P+ + Sbjct: 539 QAGMQASHYRTVPATVDVVNVKSYDLIEPHTAKYVYAIGMGQSNFPKVAKNTSLLTEEEM 598 Query: 701 PKRGD------------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 K R + + L SA ++L IS + S + Sbjct: 599 EKVNLVSASSSRFDLVSRENIKKNHAAMMSLLNSATEQLVISTPQIYNEGEDSL--SPYI 656 Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP 808 + + + S + + + L + + + + E + W Sbjct: 657 ----KILQKMGLKSEERGRIKTLSPQDIGHYKSLLSRLIESERPSLETEEWEGQRAFWTV 712 Query: 809 AASQAGKAHSEFVQPL---------------------PFTLPETVPLETLQRFWAHPVRA 847 K + P P + +L F+ + Sbjct: 713 LVRHLKKKLESQSIEIPTITGDIASKQLSDETLAALYPEDKPLNLSASSLTNFYNNQYLY 772 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDA-------ERLFRR 900 F + L++ E ++ +V ++ R Sbjct: 773 FVRNVLRLRE---------QESIHPTAFQHGLFLHRIFERVVMDQSELDFDQKVDKAILR 823 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQ 951 R + + + + ++A + +EID + Sbjct: 824 TRDEAEFAMFYNQDADARYTEEVLDKIARSSATILRDNDLVEIDGQEKSFR 874 >UniRef50_D1KF50 SRS2 n=6 Tax=rosids RepID=D1KF50_ARATH Length = 1147 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 76/619 (12%), Positives = 186/619 (30%), Gaps = 66/619 (10%) Query: 323 LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS----RSDNKRPLDPLDSSITFHV 378 D+F P+ + + + A +I + + +S + + S IT Sbjct: 526 FDSFRRDFPNYKEVRLIKNYRSSRHIVEAASSIIKNNTKRCQSKSISSENSQGSKITVKE 585 Query: 379 CHSPQREVEVLHDRLLAMLEEDPT--LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 CH+ + + + D+++ + + T + DI ++ VF +A R +P Sbjct: 586 CHNEEAQCAYVIDKIIEITNDGSTPCCSHGDIAILYR-----RQVSGKVFQNAFRQRKIP 640 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 + + A V++ +++L S + A +E + + + Sbjct: 641 FNV-HGVAFYRKKVVQVILAMLKTTFSECDDASYRRVFK-----ALLPFEKEEKKRIIEH 694 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 + + I + + + F +++ G V + Sbjct: 695 IEK--ISTSRKCSFISAASDIFNAKISGTFKRSQLTQG---RKVLQTLDMVAKLVDREQS 749 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 ++ +V +A+++ ++ L E V + D + + + + Sbjct: 750 LSAVVTCVANMI-----------PQKYLLEQRAVVDNDGGKLLNEDNDLRSVLQYLMDDV 798 Query: 617 QAIIAEGLGAQYGDAV--------PLSLLRDELAQR-LDQERISQRFLAGPVNICTLMPM 667 I+ + L + +++R + R +R V + T+ Sbjct: 799 AEFISTHCTTTEEEDAIKEKKGCNQLHSFINYISERETENFRSRRRDNENSVTLTTIHQS 858 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + + +V ++ N+ P G S + +++R L A+ A++KL Sbjct: 859 KGLEWDIVFIVKANENEIPLLHESNGNASESG-------TSLEEERRLLYVAMTRARKKL 911 Query: 728 YISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 + Y+ PS ++E+ ++ Q D E+ Sbjct: 912 FFLYVTVDSNW-QVLQPSRFLKEIPGHLLQGDMSVND-CRKVHENLPNKTEQSVSSFGTD 969 Query: 788 PFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRA 847 ++ E + L E + V Sbjct: 970 IKHEESKLTDNDVMNIPEDYASEESIAAYALNGNNFLKRFDVEVRSV----------VSH 1019 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGL-----SRYQINQQLLNALVEQDDAERLFRRFR 902 F + E + D F++ ++++ + L + + ++A + Sbjct: 1020 LFHNWAKKQAFQEPKRLIDKVRFVIGERLAIKKNKHKDVLRALKSSLTSEEAFQYAEHVL 1079 Query: 903 AAGDLPYGAFGEIFWETQC 921 LP I E Q Sbjct: 1080 RWEQLPADTRAHIVREKQE 1098 >UniRef50_A1SGT8 UvrD/REP helicase n=1 Tax=Nocardioides sp. JS614 RepID=A1SGT8_NOCSJ Length = 1073 Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 122/811 (15%), Positives = 225/811 (27%), Gaps = 130/811 (16%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLES-SQELDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 VG+P A +G G +L+ ++ V P + + ILE+ NR A + Sbjct: 312 VGDPNQAIYGWRGASVSNILNFADTFPAAGSRAVPTYPLTVNRRSDARILEVANRLAAPL 371 Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT----PRDII 409 + + ++T V + E+ L + L I Sbjct: 372 YEKYGQVEPLVAKPEAETGTVTTQVFETHADELAWLVGAVKE---AHEGLPADGGWAQIG 428 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 V+ D + VF A +P I P + ++ L+L + Sbjct: 429 VLTRDNA----HAEDVF-DALTSAGVPVEIVGLSGLLRLPEVAEIVATLTLLHDVTANAA 483 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 +L LL P R+ I LR L + E R G + L Sbjct: 484 LLTLLTGP----RWAIGPRDLRLLGRRALEIAGRHGRGA-----------DAASITDQLL 528 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 + G + L E + L +L + R + + L Sbjct: 529 EIADG-IDPAELPSLDDALADPGEHAYSPEALERFGLLSAELRMLRTYVGEP-----LLD 582 Query: 590 VCRDMLN------AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP-LSLLRDELA 642 + R +++ + AA + +AE +P L Sbjct: 583 IVRRIIDTSGTDVELGSAVSPAAAARRDNLDLFVKAVAEFQAVDGDVTLPALLAYLTAED 642 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP------LGFDL 696 + + ++ A V + T+ + + + V L+G+ + +P + Sbjct: 643 DQGNGLDVATPTEADSVKLLTVHRAKGLEWDSVFLVGVCETRFPSNRSRTLWTSSPAILP 702 Query: 697 MSQKPKRGDRSRR--------------------DDDRYLFLEALISAQQKLYISYIGRSI 736 + GD + +++ L A A ++L ++ S Sbjct: 703 APLRGDAGDLPQLAGHDKAALDAYRAATRDHDAEEELRLGYVAFTRAARRLSVTSYLWSP 762 Query: 737 QDNSERFPSVL----VQELIDYIGQSHYLPGDEALNCDE--------------SEARVKA 778 + + PS +L D+ +L E + + + Sbjct: 763 RA-TPFGPSAYQQVVRDQLHDWAEPPTWLARPEKGDPNPYDAVDPSRPWPATGTGREAAL 821 Query: 779 HLTCLHTRMPFDPQNYQPGE---RQSYAREWLPAASQ-AGKAHSEFVQPLPFTLPETVPL 834 + D G + EW + +A + L LP ++ Sbjct: 822 RIEAARRVREVDAAAVDAGLDMIETARVAEWDAELERLLAEARRDRSTDLAVPLPPSLSA 881 Query: 835 ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDA 894 L R P F + + R + A Q D Sbjct: 882 TALARLREDP-ETFARELARPMPRPPS-----------SAARFGTRFHAWVEARFGQQD- 928 Query: 895 ERLFRRFRAAGDLP-YGAFGEIFWETQCQEMQQLADRVIACRQPGQ-SMEIDLAC----- 947 GDLP G + + A R P Q L Sbjct: 929 ------LFDYGDLPGRADAGIDDDSDLKELIATFEAGPFATRTPHQVEAPFALVLRHPGG 982 Query: 948 NGVQITGWLPQVQPDGL--------LRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL- 998 G + G + V + + W+ + + A +QL L L + R+ Sbjct: 983 PGQVVRGRIDAVYAESTPEGDGFLVVDWKTNRAATADPLQLALYRLAWAELHDLPLERVR 1042 Query: 999 ---FLRKDGEWRFPPLAAEQALHYLSQLIEG 1026 + + GE PP ++A L L++G Sbjct: 1043 AAFYYVRTGEVVEPPDLPDRAA--LEALLDG 1071 >UniRef50_A8ZTY6 UvrD/REP helicase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZTY6_DESOH Length = 616 Score = 173 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 57/513 (11%), Positives = 129/513 (25%), Gaps = 94/513 (18%) Query: 250 DIKDPAY--LAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG 307 DI + R ++ + + G L D VG+ A + G Sbjct: 191 DILRDHDDVRRRYQERFEFILVDEYQDTNNLQEDLTGLLCRGDNLFCVGDDWQAIYSFRG 250 Query: 308 ---RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK 364 R ++ ++ + + + + +DI++ + D Sbjct: 251 SNMRHFLSFEQRYADARVFKLEQNYRSADTIVRVANDIID-----------YNHDKMDKT 299 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 + ++ + E + + + + + + V+ F Sbjct: 300 CFSEESGGTVEIYEFDDEVEEARWVARKAEEL--NEDGVPYDAMAVLYRT-----KFTSL 352 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 F A +PY + R + S L ++++P R Sbjct: 353 YFEHAFRRAGIPYHLLGDRGFYDRKEVMDINSYLMAAVFEKDDTAFERIINIP----RRG 408 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 + + L + + Sbjct: 409 VGAKTLASI--------------------------------------------NDMRTGA 424 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM--LNAFFLPD 602 S+ + L + L L + RP V + LN Sbjct: 425 MSLQAAVHLALAERRLSDKVYQALSDLMALLDDIRDMRPDAAIREVIERIGYLNYLKQYA 484 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNIC 662 T + +I+ + L+ + L +E VN+ Sbjct: 485 DAGSMDFTEKVENIDQLISAAARME-----SLTAYLE--EAALIREDKDDEEGGFGVNLA 537 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 T+ + + F V ++G + + P + D + ++ R L A Sbjct: 538 TIHAAKGLEFHTVFVVGCEENLLPHWKSLEEEDDLQEE------------RRLMYVAATR 585 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 A + L+++ G S + E+ + Sbjct: 586 AARCLFLTAAGFR--KGQFNRRSRFLFEIERSL 616 >UniRef50_Q9K8M6 ATP-dependent nuclease subunit A n=1 Tax=Bacillus halodurans RepID=Q9K8M6_BACHD Length = 1129 Score = 173 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 88/733 (12%), Positives = 211/733 (28%), Gaps = 160/733 (21%) Query: 362 DNKRPLDPLDSSITFHVCHSPQRE-------VEVLHDRLLAMLEEDPTL----------T 404 + P D ++ H+ + ++E + DRLL M+ Sbjct: 478 PAREPEKEDDIRVSLHITKTTEKEKDNDQVPYHHIADRLLEMVRTGEPTVWNGESWRSPN 537 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 D+ +++ A +D+ +PY + + F++LL D Sbjct: 538 WGDMAILIPVRTELL-----ALERALSDKGIPYHVYGGVGFYERQEILDFVTLLRWLDRP 592 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 F + ALL P+ F +T + L ++++ Sbjct: 593 FEELYLFALLRSPM----FGLTLDDLMFVKERF--------------------------- 621 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 S + W ++ E + L AE + + +L W RP+ Sbjct: 622 --------------SDELTWFDIVVDKEMASLFAERPVVTDAFV-RLRTWLDRWVPFRPV 666 Query: 585 EEWLPVCRDMLNAFFLPDAETEAA-MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 + ++ + L + + + +I G + L D + Sbjct: 667 PSLIDHLYELFDQTGLKMSLFVQENGMQKVRNVEKLIDVMSGWKTNVLEELLQRFDLIQA 726 Query: 644 RLDQERISQRF--LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ-------LAPLGF 694 +++E ++ V+I T+ + + F +VCL ++ P++ +G Sbjct: 727 EVEKEGEAEVEQVAGNVVHIMTVHASKGLEFPIVCLPQLD--RVPQRDKGQVRYDREMGI 784 Query: 695 DLMSQKP-----------------KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ 737 L + ++ D + +++ LF A A+ L+++ Sbjct: 785 VLRHEWEEDDGVVKLETPAFALVKEQADLATMAENKRLFYVAATRARDYLWMT------- 837 Query: 738 DNSERFP-SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP 796 E+ S + E+ + + + L + D + + P P+ Sbjct: 838 -GKEQPSTSSWLYEVEEALEEMPELRSHLKIEEDVASHDRWEKDIQTYKVPPIVPR---- 892 Query: 797 GERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN 856 + + + F PV + + L + Sbjct: 893 -----------------------------QPELVPLSVTEMMTFIQDPVAYYERYILGIE 923 Query: 857 FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 + E ++ + ++ + + AA D + + Sbjct: 924 TSVQHEAKTKQEDSNIDPSKVGSLAHKVFELVDQGVTLAGSIEMTLAAHDWTQDER-KHY 982 Query: 917 WETQCQEMQQLADRVIACRQPGQSME--IDLACNGVQITGWLPQVQPDGLLRWRP----- 969 E + + + + + E + G +I G + ++ + Sbjct: 983 EEHIQRLFRGVNQHSLQWFGEPVANEWAFSFSFEGAEIVGEIDKIVKNENEYHIIDFKTN 1042 Query: 970 -SLLSVAQGMQLWLEHLVYCASG-------GNGESRLFLRKDGEWRFPPLA-----AEQA 1016 S A+ ++ + L A + LF+ +D + L + Sbjct: 1043 QIRRSGAELLRFYEPQLALYAEAYEQLCHVPVKSASLFVVRDQQQPLHSLTDRSNVIARV 1102 Query: 1017 LHYLSQLIEGYRE 1029 ++ QL++ + Sbjct: 1103 RKHVQQLVDLRKR 1115 >UniRef50_A5U7M1 UvrD/Rep family helicase n=13 Tax=Corynebacterineae RepID=A5U7M1_MYCTA Length = 1101 Score = 173 bits (437), Expect = 5e-41, Method: Composition-based stats. Identities = 103/812 (12%), Positives = 194/812 (23%), Gaps = 151/812 (18%) Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS--DILE 344 + VG+P+ + +G G L + L LL + ++ L Sbjct: 303 DDGLALTAVGDPIQSIYGWRGASATN-LPRFTTDFPLSDGTPAPVLELLTSWRNPPQALR 361 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP--T 402 + N A + + D ++ + Q E E + D L + Sbjct: 362 VANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQAEREWIADHLRMRYQRAEADG 421 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 + P V+V A R +P + S P + +++L L Sbjct: 422 VKPPTAAVLVRRNAD-----AAAIADTLRARGIPAEVVGLAGLLSIPEVAEVVAMLRLVA 476 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + +L P R+ + L L + + Sbjct: 477 DPTAGAAAMRVLTGP----RWRLGARDLAALWRRALTL-----------------SGESP 515 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 + + + A ++ + G G + +L +L+ R L Sbjct: 516 STASPESIAMAASADADNPCLADAISDPGSAEGYSVAGYGRIGALAGELSALRGRLG--H 573 Query: 583 PLEEWLPVCRDML--------NAFFLPDAETEAAMTLIEQQWQAIIAEGL----GAQYGD 630 L + + R +L +A + A Sbjct: 574 SLPDLVAEVRRVLGVDCEVRASAPVSGGWAGPEHLDAFADVVAGYAERASARSSEASVAG 633 Query: 631 AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 + + + + L ++ V + T+ + + ++VV + ++ GV+P ++ Sbjct: 634 LLAYLDVAEVVENGLPPAELTV--ACDRVQVLTVHAAKGLEWQVVAVAHLSRGVFPSTVS 691 Query: 691 PLGFDLMSQKPKRGDRSRRD---------------DDR---------------------- 713 + + R R DR Sbjct: 692 RSSWLTDPAELPPLLRGDRASAGAHGIPVLDTSAVADRKQLSDKISEHRRLLDRRRVDEE 751 Query: 714 -YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD-------- 764 L A+ A+ L +S R PS + EL D I +S Sbjct: 752 RRLLYVAVTRAEDTLLVSGHHWGPTGTKPRGPSEFLCELKDIIDRSAAAGDPCGVVEQWA 811 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQ----------------PGERQSYAREWLP 808 A DE + + P + PG P Sbjct: 812 SAPAGDERNPLCDNAIEAVWPADPLAARRGDVERGAALVAAAMSADLPGSTTDIDHPPRP 871 Query: 809 AASQA--------GKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTE 860 + + LP + + +L PV + RL Sbjct: 872 GDAPWSTDVDALLAERAHAARGAPARGLPNHLSVSSLVELVGDPVG--ARQRLMCRLPKR 929 Query: 861 DSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE-RLFRRFRAAGDLPYGAFGEI-FWE 918 L + GDLP A E+ E Sbjct: 930 PDP------------------HAWLGDAFHAWVQQFYGAELLFDLGDLPGAADREVGDPE 971 Query: 919 TQCQEMQQL-ADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPD---GLLRWRPSLLSV 974 + A A + ++ + G + V D G Sbjct: 972 ELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVDPDGGATVVDWKTGKP 1031 Query: 975 AQGMQLW--------LEHLVYCASGGNGESRL 998 G + L + A G S + Sbjct: 1032 PHGPAAMRQAAVQLAVYRLAWAALRGCPTSSV 1063 >UniRef50_B8FBU8 UvrD/REP helicase n=2 Tax=Bacteria RepID=B8FBU8_DESAA Length = 1156 Score = 172 bits (435), Expect = 7e-41, Method: Composition-based stats. Identities = 79/526 (15%), Positives = 151/526 (28%), Gaps = 103/526 (19%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASWGKLGRDYI 311 D Y L R ++ + QL +G+P A +G G D Sbjct: 692 DSLYRESLQKRFPHVCVDEFQDVNHVQYRLLRQLCPPEADLTVIGDPDQAIYGFRGSDVG 751 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPL 370 + + F + P + + ++ E VAG + + + Sbjct: 752 FF----------NRFGEDYPQARVIELSTNYRSTETVLKVAGQVMGDPGQDFGLHSGIVG 801 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAML----------------EEDPTLTPRDIIVMVAD 414 I + E E + + +M+ + D V+ Sbjct: 802 ADQIMIIDTPTSAAESEAIVHIMESMVGGVSHFSLDSGRTDMDAGSEDWSFGDFAVLFRT 861 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 P A +PY + D++ HP +E +S + L + D+L ++ Sbjct: 862 RIQLPPL-----TEALDRSGIPYQVVDKKRLVDHPGVEELLSYIRLINQTGTDLDLLRIM 916 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + P + I ++ + LR W G + L Sbjct: 917 NFP----KRGIGDKTIETLRTWGESQG--------------------KSLIEALE----- 947 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 V GL L S+ + R+ + E + + Sbjct: 948 ------------VARRLPLPGLSNSQQIKLHSVWKTITEARKKILDLPLPEALEHLMYTI 995 Query: 595 -LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 L + A I Q L D + L + + Sbjct: 996 PLEPLYTRSGNGRTASACILDMAQDF-----------DGDLGRFCDMVN--LASDADTLE 1042 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 A V++ T+ + + F+ V + G DG+ P + G S +++ Sbjct: 1043 PEADRVSLMTMHAAKGLEFRGVFVTGCEDGLIP-------------YFREGKESDPEEEL 1089 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQ 757 LF AL AQ++L+++Y R + PS + + + + Sbjct: 1090 RLFYVALTRAQRRLWLTYAKRRRMFGKVISQQPSPFLTRIKEEMKD 1135 >UniRef50_Q1GAB0 ATP-dependent helicase/deoxyribonuclease subunit B n=3 Tax=Lactobacillus delbrueckii RepID=ADDB_LACDA Length = 1179 Score = 172 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 71/600 (11%), Positives = 172/600 (28%), Gaps = 78/600 (13%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 D + + + + P +++ S E + + + Sbjct: 273 HDFAWEREKIASPASPARDLNQAWQGQGQPDLNNLQLVKADSRYAEAYFVARTIYDEVAL 332 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 RD +V+ ++ Y ++ + +P+ ++ + HP++ +L Sbjct: 333 -KGCQYRDFLVLAPNLQEYETYLAPI----LRQNQIPFFDDLQQQMKYHPLVLLLENLGK 387 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEE----------GLRYLRQWVNESGIRWGIDDD 509 L + +L+++ +L + + + + L + GI++ + Sbjct: 388 LLQQAGDTPALLSIMKTRLLIPDWYLEGDAEAGEAAYLRDIDQLENFALAHGIKYSLWQK 447 Query: 510 NVREL---ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 +++ ++ A Q ++ L R+ + + + + + Sbjct: 448 PLKDFTKAQVIALDQEQYQKWLDRL-----DKLRDFFVSKISRLARQLKSEKDSMTAVKL 502 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 + LE W L A D + +++ + L Sbjct: 503 FFD----FLVKNGVSARLEAWR------LKASESGDLQQAQQPEQCWNLLLSLLKDYLLV 552 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 + + L Q + + V + +++ +K V ++G +G Sbjct: 553 NP-ENFAWADFFKMLTAAFSQANFATIPASLDAVTLSEYGMVQTSGYKQVFIIGAANGSL 611 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRD------------DDRYLFLEALISAQQKLYISYIG 733 P+ F D +D D Y F AL A ++YISY Sbjct: 612 PQINDQPNFLTTENLASLADFFDQDAYLEDSQQLRNLDQEYQFGNALALASDRVYISYPV 671 Query: 734 RSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 + +N PS+ + L+ + Y D ++ L T Sbjct: 672 IN-SNNDLLDPSIYYKRLLKLVNGREYRQRDLPDIAEKDRTEFARQLLLFLTSPRASLGY 730 Query: 794 YQPGERQSYAREWLPAASQAGK--------------AHSEFVQPLPFTLPETV------- 832 E S + + + A+ Q + L E + Sbjct: 731 LAYAEENSAQSPLVAKLVELSRQYEEEKAEEIAEGMAYDNNPQDISEDLAERLYGKDLLS 790 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD 892 + L+ ++ + F L++ R E+ L + + L+++ Sbjct: 791 SVSQLESYYQNSFEYFLNYGLRLRPRAENE---------LNAIQSGNYFHRTFELLLKEM 841 >UniRef50_C5CB78 DNA/RNA helicase, superfamily I n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5CB78_MICLC Length = 1176 Score = 172 bits (435), Expect = 9e-41, Method: Composition-based stats. Identities = 97/778 (12%), Positives = 184/778 (23%), Gaps = 158/778 (20%) Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 + + + + + E + RL A+ P T V+ + P + Sbjct: 418 RPRPGAGEGVVRVDRFVTAEEEAADVVARLGALTGAGPGGTTPSRAVLCRTRAQFGPVL- 476 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 A LPY + + P + +++L + S+ ++ LL P R+ Sbjct: 477 ----DALDAAGLPYEVLGLSGLLALPEVAEVLAVLHVLADPTRSDQLVRLLTGP----RW 528 Query: 484 DITEEGLRYLRQWVN---------ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 I L L++ +G R D + + Sbjct: 529 RIGVADLEVLQERARFVSRLRAGRAAGGREDPAGDAPDVAPVRDVSPEEDADAAALLEAL 588 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 ++ +W G E + L ++ +L ++ P + V R+ Sbjct: 589 DSLPGEGTDWVG----SRGRGFSPEGLARLRAVNAELRRLFTRTGED-PADLIAEVIRET 643 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ-YGDAVPLSLLRDELAQRLDQERI--- 650 + +A A A L+ L+ E Sbjct: 644 GLDVEVALRPGVSAAAARRH-LNAFQDAARDFGAGTTATDLTAFLAWTESVLEHEDGLGV 702 Query: 651 -SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP---LGFDLMSQKPKRGDR 706 + G V + T + + + VV + G+ +G +P A P RGDR Sbjct: 703 ENAEPTPGLVQVLTAHASKGLEWDVVAVPGLQEGTFPSTRADRWTSPGAGALPWPLRGDR 762 Query: 707 SRR--------------------------------------------DDDRYLFLEALIS 722 + ++R L A Sbjct: 763 ASLPQWDGSWAQDQRDWVQSAGTKYSSKAAQEGNPDPYAVAVAAHAEREERRLAYVAYTR 822 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQE---LIDYIGQSHYLPGDEALNCDESEARVKAH 779 A+ L++S + S ++E L + P + E+ Sbjct: 823 ARSALWLSTSLFKGVNKEPLPASAFLEEVAGLAGQVPGVALGPAPAEDDLPEANPAAGRT 882 Query: 780 LTCLHTRMPFD-PQNYQPGERQSYARE-WLPAASQAGKAHSEFVQPL------------- 824 L P D P+ + E W P ++ Sbjct: 883 LVARWPFDPLDGPEAFVADPEDPEDEERWQPLPRRSRARREAVEAAAAAVHAADPAALAD 942 Query: 825 -----------------------PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 LPE V + A P +L+ Sbjct: 943 DPELARQVDWVLLRRRDVAGTGGETALPEHVSVSLYGELAADPQA--VAEQLRRPLPRPP 1000 Query: 862 SEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC 921 + R L + AA A + Sbjct: 1001 A----------HAARRGTAFHAWLEERFGATGMLDIDSAEDAADLWVDEALDLGPMQEWF 1050 Query: 922 QEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW 981 + + R ++ G+ + G + + G P + W Sbjct: 1051 R-----SSRWAERTPAFVEAPVETTVGGITLRGRVDAIYRSGGDPRLPFDPEADWELVDW 1105 Query: 982 -------------------LEHLVYCASGGNGE-----SRLFLRKDGEWRFPPLAAEQ 1015 + L + G S +++ E FP L E+ Sbjct: 1106 KTGAVPRGRDLELKSLQLAVYRLAWSRLHGIPLERIGASFVYVAHGQERSFPDLPGEE 1163 >UniRef50_UPI0001BC375D ATP-dependent DNA helicase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC375D Length = 648 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 55/474 (11%), Positives = 151/474 (31%), Gaps = 108/474 (22%) Query: 305 KLGRDYIYLLSD--------LESSQELDAFVDVTPDNLLH------NIQSDILELENRAV 350 K+ D I +L++ + Q + F P+ +L+ + IL++ R+ Sbjct: 252 KVQYDVIRMLAEPERNIFIVGDDDQSIYGFRGSRPEIMLNFEKDYPEAEKIILDINYRST 311 Query: 351 AGV--------NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 + + + N + + ++ E + + + + ++ Sbjct: 312 SNIVDASGYVIRNNKVRFDKNIHTDNEKGDKVDIIETNNINEEYDRIVKIIRSFVDAGK- 370 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA-RQSHPVLEAFISLLSLP 461 D V+ + +P ++ + +P+ + D H + + ++ ++L Sbjct: 371 -QYADFAVLFRTNVTAAPLVRK-----FMENNIPFVLRDGIPNIFEHWIAKDILTYMTLA 424 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 + D + +++ P+ I + + Sbjct: 425 EGGRKRADFIRIMNKPL----RYIGRDYVT------------------------------ 450 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 ++ + + Y E + + + L ++ Sbjct: 451 -----------------DSEVSFDELEKYYEEKPWMINRIRKMERELNAMSDM------- 486 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + R + + E ++ Q+ I+ E + + + R+ + Sbjct: 487 -TCYAMINYLRKGVG-YDDYVKEYAKNHSIEPQELSDILDEIMESSKD-FIKFDDWREYI 543 Query: 642 AQRLDQERISQ--RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 + ++ + + R L V + T+ + + + V ++ N+G+ P + A L D Sbjct: 544 EKYTEELKENHTKRDLKDYVTMTTMHSSKGLEYDTVFIIDANEGITPHKKAVLDAD---- 599 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 +++R +F A+ A++KLYI + N S V E+++ Sbjct: 600 ---------IEEERRMFYVAMTRAKKKLYIFCPK--ERYNKSLETSRFVNEIMN 642 >UniRef50_C4Z7Y1 DNA helicase II / ATP-dependent DNA helicase PcrA n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z7Y1_EUBE2 Length = 717 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 58/461 (12%), Positives = 132/461 (28%), Gaps = 90/461 (19%) Query: 310 YIYLLSDLESSQELDAFVDVTPDNLL-----HNIQSDIL---------ELENRAVAGVNI 355 Y L + Q + + P+ ++ H D ++ N A + ++ Sbjct: 260 YQNLFVVGDDDQNIYTWRGSDPEYMINFDKTHENLQDYSLTENFRSTPQIVNAAKSLISA 319 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 + P + F+ + ++E + D +L + ++ + D ++V Sbjct: 320 NQNRLEKQMISNRPDGNKPVFNAADTEEKESLWIADTILDNVAKN--MKYSDHTILVRAA 377 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 A R +PY I + +S + + S D+L + Sbjct: 378 SQTRSL-----EEAFIKRKVPYKILSGAKFYESEEIRTVLSYMRMVYS-LTDMDLLYTIS 431 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 P R ++ + L+ ++ LG Sbjct: 432 RP----RRGFGKKSVEKLKNAAAQNNCSLFK-------------------------ALGK 462 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 +E ++ ++ + + C DM Sbjct: 463 QIEDGDI-----------------TQKNVIEYYNAISELHDTY-VTYTCTDIVNKCLDMG 504 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 L + + + + + I L + V L+ L A Q+ + Sbjct: 505 YRKALEQDIDQTRLDNVSELIRTIT--ALEEDNQEKVELADLLSHFALFSAQDEDGEY-- 560 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 V + T+ + + F V + G+ +G +P +++R L Sbjct: 561 -NVVKVMTIHTAKGLEFDTVFVPGLVEGQFPSSRLRN-------------EDEYEEERRL 606 Query: 716 FLEALISAQQKLYIS-YIGRSIQDNSERFPSVLVQELIDYI 755 A+ A+ LY+S Y + + PS + ++ + Sbjct: 607 LYVAMTRAKNMLYLSTYRKKDGRF--AARPSAFLSDIDTNL 645 >UniRef50_D2SFF1 UvrD/REP helicase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SFF1_9ACTO Length = 1120 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 112/907 (12%), Positives = 215/907 (23%), Gaps = 153/907 (16%) Query: 150 ETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLP- 208 E G +AW A L + + Y G+ +R +E L LP Sbjct: 207 ELGEHDITADRLRAWTAQLERRIAGYPDAKGKRGPYRP-----VLEMLARQRARVALLPL 261 Query: 209 -----SRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTR 263 +R G AL I + A+ Sbjct: 262 VEAFEARKRAAGAIDHSDQV-----ALAARIAVT-----------APEVGRRERARWRIV 305 Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQEL 323 ++D + R E VG+P + +G G + + + Sbjct: 306 L-LDEYQDTSVGQLRMLEALFGRTTGHAVLAVGDPRQSIYGWRGAS-AGTIERFDRTFPG 363 Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS--ITFHVCHS 381 + L + ++D L + P +T + + Sbjct: 364 VRSREAQRLTLATSWRNDGAVLAVANAVAGLLPAPEVPLPDLAPAPSAGHGLVTAGLYPT 423 Query: 382 PQREVEVLHDRLLAMLEEDPTL-------TPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 +E E L DRL A + + P V+V A R Sbjct: 424 VAQETEALADRLAACWRGEDPVLPPRADGRPPTTAVLVRTRKQLPGIAA-----ALRARG 478 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 LP + P + ++ L++ + + LL AR+ I L L Sbjct: 479 LPVTVVGLGGLLEVPEVSDVVATLTVLVDPSAGDAMGRLL----TGARWRIGPRDLAALE 534 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 D ++ + + + + L + S Sbjct: 535 SRARALVHSRKPDREDDDDTAPRPSERGSIVEALD-------------------DLGDPS 575 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERP-LEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 L L +L R L + P + + + + + + Sbjct: 576 AFSPAAYRRLRRLAAELAHLRGRLGESLPDMVDDVARVLGLETELASAPGVSPGSARAHL 635 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI----SQRFLAGPVNICTLMPMRS 669 A+ AE + L L ++ER + + T + Sbjct: 636 DALHAVAAEFTELA--ELPSLPAFLGYLRDAEERERGLEPGEVAVDPESIQLLTGHSAKG 693 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDL--------------------------------- 696 + + VV + GM +P + + Sbjct: 694 LEWDVVAVPGMTADQFPSRTDTSDSWVKDPGAVPVDLRTTDREELPQLRLPVPGSGDQAA 753 Query: 697 ----MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 + + R ++ L A+ A+ L S PSVL+ + Sbjct: 754 VRAALEDYVEEWKRFGEAEEIRLGYVAVTRAKHLLLCSGSWWRE-GVKPNGPSVLLDTVR 812 Query: 753 DYIGQSHYLPGDEALNCDE--SEARVKAHLTCLHTRMPFDPQNYQPGERQSYA------- 803 + A +E + ++ + P P + + Sbjct: 813 RACSAGAGVVVAWAERPEEGATNPALEEWPVGMWPADPLSPPRRRALTAAAELVAGAAPH 872 Query: 804 ---------------REWLPAASQAGKAHSEFVQP-LPFTLPETVPLETLQRFWAHPVRA 847 W+ A + +P + LP + + L P Sbjct: 873 PLDAAAVLGTGDPEVERWVRDADLLLRERRRIARPTVEVPLPSHLSVSELVTLRRDPAE- 931 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDL 907 RL+ + + L +LL+ + Sbjct: 932 -LARRLRRPMPAAPAPLARRGTAFHAWLEERFSVARLLDLDELPGSGDESAA-------- 982 Query: 908 PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRW 967 P GA + LA + + + + + G + V DG + Sbjct: 983 PDGALTALQE-------AFLASPWADRQPVEVEVPFETPLGPLTLRGRIDAVFDDGGGGF 1035 Query: 968 RPSLLSV 974 Sbjct: 1036 EVVDWKT 1042 >UniRef50_B3QYG2 UvrD/REP helicase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QYG2_CHLT3 Length = 700 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 69/503 (13%), Positives = 157/503 (31%), Gaps = 101/503 (20%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQ------SDILELENR 348 VG+ + + G +Y +L F + P+ L ++ +IL L N Sbjct: 275 VGDDAQSIYAFRGANYRNILD----------FPNQFPECKLIKLEENYRSTPEILSLTNF 324 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 + + +++P L + + + + R+L + + + R+I Sbjct: 325 VINRAKEKFTKTLFSRKPEGELPA---IVSAPDERFQTRFIAQRILEL--REEGVPLREI 379 Query: 409 IVMVAD-IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 V++ + DSY+ R +P+ + ++ F++ L L + Sbjct: 380 AVLMRNGRDSYA------LELELRKRNIPFVKFGGQKVVEAAHIKDFLAYLKLIYNPRDV 433 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 +L + + + + +WV +SG + I Sbjct: 434 ISWNRVL-----QLLEGVGPKTAKQVIEWVKDSGSPYEIGGV------------------ 470 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 + S A + +L LL L+ ++ L + Sbjct: 471 ------------------------KMSAKYAASLKNLGDLLGSLSSGKKSLGE--TAAAV 504 Query: 588 LPVCRDML-NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 + ++ ++ + E + P+ Sbjct: 505 MNYYLPLMHEKYYEDFPKREKDLENFLNIIANYQNLETLLAELALDPIE--------LTA 556 Query: 647 QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR 706 E + P+ + T+ + + ++ V L+ M DGV P + A D Sbjct: 557 IETEPAKPDEQPMTLSTIHSAKGLEWRTVFLINMLDGVLPSKYAVD------------DA 604 Query: 707 SRRDDDRYLFLEALISAQQKLYISYI---GRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 + D++ L A+ A+ LY+ Y + ++ PS +Q+L D + + L Sbjct: 605 ASLDEELRLLYVAMTRAKSLLYVCYPIVCTQRGFEDYMSNPSRFLQKLPDALYERILLVQ 664 Query: 764 DEALNCDESEARVKAHLTCLHTR 786 ++ + + + K L + Sbjct: 665 EKRKSPPQLSGKAKPQLQKKASG 687 >UniRef50_Q11Q08 DNA-dependent ATPase I and helicase II n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11Q08_CYTH3 Length = 1041 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 87/679 (12%), Positives = 190/679 (27%), Gaps = 120/679 (17%) Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 ++ E + ++L + + ++ V+ + I+ R Sbjct: 385 KIIEYYNELHEEASVVEQLEKLHH--EGVDLSEVAVIYRKHSKVADIIK-----VLEKRK 437 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVS-----EDVLALLDVPVLAARFDITEEG 489 +P I P ++ I +L+ E + L+ F+I Sbjct: 438 IPLNIKQSINVLHLPFVQNLIDILAYIQKENEYPDSGEEQLFRLMHFEY----FNIDPTD 493 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + + + + I + + Sbjct: 494 IANISRKTRRTSESSAIRWR-----------------------------------ELMSK 518 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA- 608 +E + L + + SL L W++ L+ +E Sbjct: 519 KEELAKLNLHSLPSILSLEANLTYWQKEFHN-ITLQVLFEKITTRGGILSWIMNSSEKTW 577 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER----ISQRFLAGPVNICTL 664 + + + E + L + + LD + VN T Sbjct: 578 YMQVLTTFFDFLKE--ETARNPLLSLKEFLSTIQKMLDNDVRLNLQKIIHAEKGVNFVTA 635 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPL-GFDLMSQKPKRGDRSRRDDDRYLFLEALISA 723 + + ++ V L+G N + Q GF + S + + + +D+R LF AL A Sbjct: 636 HSSKGLEYRYVFLIGCNSRQWEGQAERSFGFKIPSTITENVEHDKEEDERRLFYVALTRA 695 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 ++ LYISY + + + E S + EL E + + Sbjct: 696 KEYLYISYPAKDVNE-KELVCSRFLVEL------------TEQETTKTTFVSLSDDAIVQ 742 Query: 784 HTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAH 843 + Q +P +L ++ + + + L ++ + Sbjct: 743 YKLDIL--QFTEPPVIPLIDAVYLTELLESYQ----------------LSVTHLNKYLSC 784 Query: 844 PVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRA 903 P+ +F+ L V + + I E L + L + + L F+ Sbjct: 785 PIAFYFENMLMV--PSARTASSGFGTAIHEALKDF-FAAMLADEEKRFPTVQYLSEVFKL 841 Query: 904 AGDLPYGAFGEIFWETQCQE-----MQQLADRVIACRQPGQSMEI---DLACNGVQITGW 955 + F I ++ + +L + I + +E ++ GV I G Sbjct: 842 KLKNVHSHFTLIEYKNYETYGSTVVLPELYETYIGEWEKNVLLEHRIDNVEYKGVPIKGN 901 Query: 956 LPQVQPDGL----LRWRPSLL------------SVAQGMQLWLEHLVYCASGGNGESRLF 999 + +++ G + ++ G W + + Y N + Sbjct: 902 VDKIEIHGSDVNVIDYKTGKYASSKSKLLPPTEKEPNGGDYWRQIIFYKLLIENDRKTNY 961 Query: 1000 LRKDGEWRFPPLAAEQALH 1018 GE F + + A Sbjct: 962 KVVTGELDF--VEPDAATK 978 >UniRef50_A3TGM1 Putative DNA helicase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TGM1_9MICO Length = 1103 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 100/838 (11%), Positives = 210/838 (25%), Gaps = 139/838 (16%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR 308 D A+ + E L + VG+P + +G G Sbjct: 273 FDDIGAIERARHRVVLLDEFQDTSEAQLALLKALYVAPGETSAVTAVGDPHQSIYGWRGA 332 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 L + D + N + + + A Sbjct: 333 SATTLTRFAVEFGDPDPAQKLDLSTSWRNDSAVLAVANHLAQPLRAASRVKVEPLASRPG 392 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 ++ + E D + L + V+ ++ + Sbjct: 393 AGVGAVEVARLTTAADE----ADHIARWLATHRSRGAVSAAVLCRKRAEFATV-----TA 443 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A + +P+ + P +E ++LL + + ++ LL P++ + Sbjct: 444 ALEEHGIPHEVVGLGGLLLTPEVEDVVALLHVVQDPARGDHLVRLLSGPMMR----LGIA 499 Query: 489 GLRYLRQWVN-ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L L W + +R G + ++L A + L + + V Sbjct: 500 DLDALAAWSRVQQRLRGGAVARHEKDLAPDAANAPSIIEALDSLPPRGWVGDEGERLSDV 559 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + + LA+ + ++ L + E + P+ A Sbjct: 560 A---------RDRLAGLAATVRRMRGL-TFLPLADLVLEAEKALGLDIEVLSRPEYTPAA 609 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR----FLAGPVNICT 663 A + + + A+ + D L D + +D+ER R V + T Sbjct: 610 ARAHL-DAFGDVAAQFSQSA--DRATLGGFLDWIKAAIDEERGLDRGYADATPDAVQVMT 666 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPR------------------------------------ 687 + + + + VV + + + +P Sbjct: 667 IHAAKGLEWDVVAVPALVESTFPAHNLHSPSFKDGQWRISAPKDKGWLAGLQDGGLPYEL 726 Query: 688 -----------QLAPLGFDLMSQKPKR----GDRSRRDDDRYLFLEALISAQQKLYISYI 732 + +G+D ++ + + G ++R L A A+ L ++ Sbjct: 727 RGDRDGLPEFGWRSAVGWDELAARLEEFAVSGGEHAVAEERRLAYVAATRARHALLLTAS 786 Query: 733 GRSIQDNSERFPSVLVQELIDY---------IGQSHYLPGDEALNCDESEARVKAHLTCL 783 S + + R S + E+ + I + LP + + + Sbjct: 787 VWS-RPKTPRVTSRFLDEVRELASVEGSPVRILEWVDLPVPPEDGSPLVKPGTEDGHEFV 845 Query: 784 HTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF----------------T 827 + + E + + L Sbjct: 846 WPVDHLGHRRVRADAAARAVTEASEGPESTSATVGPWARELDLLLAERARRASRHDDIVE 905 Query: 828 LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNA 887 LP + +L F P R R P R + Sbjct: 906 LPSHLSTSSLVAFATDPERF------AAELRRPMPSAPAQ------AARRGTAFHAWIEE 953 Query: 888 LVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC-RQPGQSMEIDLA 946 + LF +A + P G E+ + +R + + +EI+ A Sbjct: 954 HYARAAIVDLFDLPGSADEDPMGD----------AELPAMRERFLESPWAAREPIEIETA 1003 Query: 947 C----NGVQITGWLPQVQPD----GLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGES 996 +GV I G + V D + G + L A Sbjct: 1004 LETVVDGVAIRGRIDAVFADVEGSDWVIVDWKTGRKPSGEVARMRALQLAAYRIAWAR 1061 >UniRef50_D1V906 UvrD/REP helicase n=1 Tax=Frankia sp. EuI1c RepID=D1V906_9ACTO Length = 1243 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 111/801 (13%), Positives = 187/801 (23%), Gaps = 127/801 (15%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS---DILELENRAVA 351 VG+P A +G G L D + L Q +L L N A Sbjct: 435 VGDPAQAIYGWRGASVGNL--RRFPEHFRRLGGDPAQVHQLTVNQRSGGRLLTLANAVAA 492 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD---- 407 G+ ++ S + RP L + S E L +L A L PR+ Sbjct: 493 GLPVDARSVTLRPRPAVALAGETIVALHTSWAEEAAWLAGQLAARLRAASPGDPREPGPS 552 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 V+ + A LP + + P + ++L + D + Sbjct: 553 CAVLARSWADVPALV-----DALGAAGLPVEVLGLGGLLTKPEIADIRAMLEVLDDPTAN 607 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 + LL P R + L L + E R G+ Sbjct: 608 PAMTRLLSGP----RLRLGPRDLAALGRRAAELA-RSGLPGRPRAVTAPADP-------- 654 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGL-IAELVGHLASLLMQLNIWRRGLAQE--RPL 584 + A E AE L + +L R L + Sbjct: 655 ---LAEAVADVDPSDVVSLADALAEPGDEVSAEATRRLRAFADELAELRGHLGAGLVELV 711 Query: 585 EEWLPV--CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA-QYGDAVPLSLLRDEL 641 + L + + G L+ L Sbjct: 712 HRVVETTGLDVELELAAPRGGRGRENLAAFLRVAADFERSAAGFDDASGRASLTSFLGFL 771 Query: 642 AQR--LDQERISQRFLAG-PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 + ++ + G V + T+ + + + VV + ++ +P + Sbjct: 772 SAGERYERGLDADVPGTGRAVQVLTMHGSKGLEWDVVAVPNISRTAFPDVQPGDRWITTP 831 Query: 699 QK---PKRGDRSRR------------------------DDDRYLFLEALISAQQKLYISY 731 + P RGD + ++R L A A+ L S Sbjct: 832 EILPTPLRGDAAELPVFEVAADRAAFDRFAGECREQAEQEERRLAYVAFTRARWTLVASG 891 Query: 732 IGRSIQDNSERFPSVLVQELIDYIG-QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 R PS + EL ++ + A P + Sbjct: 892 HWWGPTQKMPRGPSPFLLELAEHAAGDGNGRVDHWADTPLAKTNPSLETPPVFTWPAPLN 951 Query: 791 PQNYQ---------------------------------------------PGERQSYARE 805 P + E S + Sbjct: 952 PVEHAARRDAADAVRGLLASAPAAARTAAARAAGAPPAGGAGITAGDVDGASEEPSARDD 1011 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 +Q +E Q L E + R A P +++ + Sbjct: 1012 RAGMTAQERALLAELDQETRLLLDEQLTARAPARLVALPTGLTATQVMKLRADPDGLARE 1071 Query: 866 DTEPFILE---GLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQ 922 P SR + + E+ DLP + Sbjct: 1072 LVRPMPRRPVPAASRGIRFHAWVEEVFERRP-------LLDHEDLPGAEDDYLDDAELRA 1124 Query: 923 EMQQ-LADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLS----VAQG 977 LA A R +L G + G + V G R+ A Sbjct: 1125 LKDAFLAGPYGARRPYAVEAPFELPLGGRVVRGRIDAVYDLGAGRYEVVDWKTGSTPADP 1184 Query: 978 MQLWLEHLVYCASGGNGESRL 998 +QL L L + + Sbjct: 1185 VQLALYRLAWSRLRAIPPREV 1205 >UniRef50_Q6ZHK2 Os07g0492100 protein n=4 Tax=Poaceae RepID=Q6ZHK2_ORYSJ Length = 1165 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 67/544 (12%), Positives = 161/544 (29%), Gaps = 58/544 (10%) Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGK 305 Y I L + + + ++ + + + + G Sbjct: 481 DYHDFINSSITLLTKFPEVYDECRNTWQAIVVDEFQDTSAMQYYLLKTLASHNRITIVGD 540 Query: 306 LGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKR 365 + + D+F P++ + + A + + Sbjct: 541 EDQSIFSF--NGADVSGFDSFRRDFPNHKEVRLSKNYRSTRAIVEAATALIHNNTKRQSH 598 Query: 366 PLDPLDS----SITFHVCHSPQREVEVLHDRLLAMLEED-PTLTPRDIIVMVADIDSYSP 420 L D+ I CHS + + D+++ I V+ Sbjct: 599 KLAETDNPSGNKIIVKECHSEDSQCAFVIDKIIETTSSSVEGCHFGKIAVLYR-----RQ 653 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 F ++ +R +P+ I A V++A +++L + Sbjct: 654 ITGKAFQASFRNRKIPFNI-HGVAFYRKKVIKAIMAILKTTLPGCDDDAPW----HQAFK 708 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 A +E + + + + I + + + + F ++ G + SA Sbjct: 709 AILPGDKEEKKKIIHHIEK--ISLARKCSFISAATDIFSAKVSGTFKRAQITQGRKVLSA 766 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 ++ ++S ++ G L Q+ LE+ R +++A Sbjct: 767 LDSLSKLVEREQSVSVVISSAG-------------DMLPQKYLLEK-----RAIVDADGG 808 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP------------LSLLRDELAQR-LDQ 647 + + + Q +++ L + +V L D ++ R + Sbjct: 809 KLLNEDNDIRSVLQFLMDDVSDFLSTHFSSSVDTSKTEEKGCASTLKAFIDYISLRETEN 868 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 R + + + T+ + + + VV ++ ND P G + S Sbjct: 869 FRSRKEENKNSITLTTIHQSKGLEWDVVFIVQANDSEIPLLHEYNG-------TVKEAGS 921 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 +++R LF A+ A++KLYI ++ PS ++E+ ++ + Sbjct: 922 TLEEERRLFYVAMTRARKKLYILHVTVDSNR-QLLQPSRFLREIPAHLLEVQGEGTVRRT 980 Query: 768 NCDE 771 Sbjct: 981 PEQP 984 >UniRef50_O66983 ATP-dependent DNA helicase REP n=3 Tax=Aquificaceae RepID=O66983_AQUAE Length = 669 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 53/434 (12%), Positives = 121/434 (27%), Gaps = 82/434 (18%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 IL + N + +E R + + E + ++ + E Sbjct: 263 ILRVANAVLEASTLEWKDLIPKLRGVRGEGQKPYVRRFQDEEEEALWISRKIKELAGE-- 320 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 +DI V+V +I VF +PY + ++ I+LL L Sbjct: 321 -YELKDIAVLVR-----VGYITDVFERTFFKAGIPYKVVGTIKFYERIEIKNLIALLRLI 374 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 + L F + + + Sbjct: 375 YNPSDEVAFKRL--TEFFVKGFG-------------------------DKSFEVVKKNFK 407 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 W L L +A ++ + + L + + +++ + Sbjct: 408 GNWFKALKESLKKLPKNAAISAYEFLKAVVPLYKNPEKYHEGLEAFVEKIDYY------- 460 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 ++L F + E + +++ ++ A L L E+ Sbjct: 461 -----------ELLKEKFK--KDYEERIENVKEFLSSLKDFYAKAY-----TLEDLLAEI 502 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 + V I T+ + + F VV L + +G+ P + + ++ Sbjct: 503 T-----LTSEEEEEENAVKILTIHSAKGLEFPVVFLPRLEEGILPHHRSQESERELEEER 557 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 + F A+ A+ L++SY + R PS + ++ ++ Sbjct: 558 RL------------FYVAITRAKDLLFMSYTKK-----ENRKPSRFLSDIPKHLLDLSAF 600 Query: 762 PGDEALNCDESEAR 775 + + +E+ Sbjct: 601 KKKKKVAYEENLRP 614 >UniRef50_C4DDU1 DNA/RNA helicase, superfamily I n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDU1_9ACTO Length = 1029 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 111/854 (12%), Positives = 228/854 (26%), Gaps = 100/854 (11%) Query: 165 QAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLP---SRVFICGISALPP 221 Q + + L+ + A + F L R+ G P Sbjct: 123 QDVIIRELLAHDAVEWPEAVRPALGTRTFAAQLRDLLLRATERGISAPRLARLGREHDRP 182 Query: 222 VYLQALQALGKHIEIH-LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 ++ A + +++++ L Y A ++L Sbjct: 183 EWVAAADFMTRYVDVLALRSLTGGATYDSAEIVRAAASELADDPELVPPPKFTFVDEVQD 242 Query: 281 ENAGQLFNSDGEQDVGNPLLAS-------WGKLGRDYIYLLSDLESSQELDAFVDVTPDN 333 + QL G L+A +G G D LL + N Sbjct: 243 LDPAQLELLRLVAGQGANLVAFGDADSATFGFRGADV-RLLREFGDRFPTADGDPAPEVN 301 Query: 334 LL--HNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHD 391 L H S +L + + + R+ RP + + S ++ + Sbjct: 302 LATCHRSASALLNATSLVAKKLRGTDRFRARAPRP-EVGAGQVEVAALRSAAQQAAYIAR 360 Query: 392 RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD-RRARQSHPV 450 +L + + V+V + P V A +P I+ +A + P+ Sbjct: 361 QLRVAHLR-EGVAWSQMAVIVKSAAEHLP----VVERALRHAGVPVEIAAIDQALSARPI 415 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 + ++++ + + L + G D + Sbjct: 416 VRHLLTIIQC-----------------------GLNPKSLDEDTAVALLHSVYGGADSLS 452 Query: 511 VRELELPATGQHTWRFGLT---RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567 R L +L+ + A+ P+ E IA L+ + S Sbjct: 453 ERRLRQELRRLAHAADVFRSPGELLVEALRDPAELTALPEEPWAEPPRRIAGLMECVRSA 512 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 + + + L L ++ + AM + GA Sbjct: 513 TGSVEDVLWAVWERADLSRRLARRAVSRDSRAVAADGDLDAMMTLFDWAADFADRLPGAG 572 Query: 628 YGDAVPLSLLRDELAQRL-DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 L Q L R +Q V + T + + + +V + G+ +G +P Sbjct: 573 AD-----VFAAHVLEQVLPADTRAAQARRGETVQLLTAHSAKGLQWDLVVVAGVQEGTWP 627 Query: 687 RQLAPLGFDLMSQKPKR--------GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 + D++R LF A A+ +L ++ + D Sbjct: 628 NLRPRGSIMGSEALVETVTSGTVVDTMTLLLDEERRLFYVAATRARDRLIVTCVA----D 683 Query: 739 NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE 798 E PS ++EL + L + + A L ++ + Sbjct: 684 EDENQPSRFIEEL------GITVERPARLERPMTLPSLVAELRLAACGPAGRRKDAAIAQ 737 Query: 799 RQSYAREWLPAASQAG----KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQ 854 A++ +P A + S+ + V T++ +R + Sbjct: 738 LSVLAKQAVPGADPEEWWGLRPISDHAPLILPGERVKVSPSTVELVEQCGLRWMLERHGG 797 Query: 855 VNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAA--GDLPYGAF 912 EI + A DD + F A LP+ A Sbjct: 798 TEPSGLPQEI-------------GNLVHAAAEAAAVTDDPRQAMADFVAQHLAKLPFEAP 844 Query: 913 G--EIFWETQCQEMQQLADRV----IACRQPGQSMEIDLACNG----VQITGWLPQVQPD 962 + E + + A + + + L +++G + +++ D Sbjct: 845 WKAKQDSERVRSMVDKFASWLESNNRDLVAAEKRFTVKLPDGPPGVTTELSGAVDRLERD 904 Query: 963 GLLRWRPSLLSVAQ 976 R + + Sbjct: 905 LHGRLHVVDIKTGK 918 >UniRef50_B6K032 ATP-dependent DNA helicase srs2 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K032_SCHJY Length = 819 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 56/479 (11%), Positives = 131/479 (27%), Gaps = 90/479 (18%) Query: 295 VGNPLLASWGKLGRDYIYLLS---DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 VG+P + +G + L+ D ++ + + + I+ + Sbjct: 261 VGDPDQSIYGFRSAELGNLVMMTTDFPDTRVFHLETNYRSADSILETAMAIINQDKARPQ 320 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL-TPRDIIV 410 S F S +E + + M++ P L + DI + Sbjct: 321 KTLRTSHRLSIKPY----------FKEFDSNDQESAWVACEIKRMVKSCPGLFSYSDIAI 370 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 +V + A A++ + Y + + ++ + R + + Sbjct: 371 LVRSSS-----LTRAIEHALAEQGIAYKMVGVHKFFDREEVRDVVAYARVVAFR-DEQAL 424 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 + +++VP +I + + + Q L L G + + + Sbjct: 425 MRIINVP----SRNIGKVKVERILQETERRHTS------MWNTLCLLNNGSFSLSQRVDK 474 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 +G ++ + + L + Sbjct: 475 QF-------------------------QRELGKFMHVINT-TEASCDSSAPFSISSMLEI 508 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL-----GAQYGDAVPLSLLRDELAQRL 645 + + + + + +I + G + D +S R L + L Sbjct: 509 LLRKVKYYEYLKKKHPSTYEEKWENVMELIRQSDVLGEQGVLFDDEDDISENRLALHRFL 568 Query: 646 DQE-----RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 + V I TL + + + VV L + D + P + Sbjct: 569 ANAAIVGSTDNNEETRHQVTISTLHAAKGLEWPVVFLPCLCDTILPHSRSTD-------- 620 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYIS--------YIGRSIQDNSERFPSVLVQEL 751 D++R L + AQ LY+S + S + + S + ++ Sbjct: 621 --------VDEERRLLYVGITRAQAMLYMSSFRGMQSNFFSVSSSETTHMKRSRFLSDI 671 >UniRef50_B9XNK2 UvrD/REP helicase n=2 Tax=Verrucomicrobiales RepID=B9XNK2_9BACT Length = 692 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 52/515 (10%), Positives = 137/515 (26%), Gaps = 58/515 (11%) Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV---GNPLLASWGKLGRDYIYLLS 315 + ++R E ++ + +V G+ + + G ++ ++ Sbjct: 227 REHYQRRFQFILVDEYQDTNALQSELIDLLAARHHNVMVVGDDAQSIYAWRGANFQNIIK 286 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSIT 375 E E + + +IL L N A++ + + R Sbjct: 287 FPERYSEARVY----KIETNYRSTPEILNLANAAISANVKQFEKQLTPARKSGLKP---V 339 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 C + + + R+L + + + + V+ F R + Sbjct: 340 LVPCMTASEQASFVAQRMLEL--REEGVNMNQMAVLYRS-----HFHALELQLELTRRNI 392 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 P++I+ ++ + + L ++ L + + +G L Sbjct: 393 PFSITSGIRFFEQAHIKDVAAYIKLVNNPRDELAFKRL-----VQLLPGVGGKGADKL-- 445 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + ++ +L A + +S Sbjct: 446 -------------WARFQSAFKVIPENLQADARDTLLPSETSTKADRNPVATALQASASA 492 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 + + A + ++ + + + + + + +Q Sbjct: 493 VPKKTAVAWAQFVATISQLETEPVRGKTDKMIRLIVEAGYDEHLQENYANYRNRLDDIEQ 552 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 + + L+ + V + T+ + + F VV Sbjct: 553 LALFAQQFSTTE-----EFLAQLALLSNLEAETDEPANNDNEQVKLSTIHQAKGLEFDVV 607 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 ++ + DG++P + + ++ R L A+ A+ +LY+SY Sbjct: 608 FIIMLCDGLFPSARSLDTAEGEEEE------------RRLLYVAITRARNELYLSYPLIR 655 Query: 736 IQDNSE----RFPSVLVQELIDYIGQSHYLPGDEA 766 + + PS + EL L Sbjct: 656 MMPGGSGDAMQQPSRFLSELPKESLDEWNLKTINP 690 >UniRef50_Q029V8 ATP-dependent DNA helicase, Rep family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q029V8_SOLUE Length = 788 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 63/525 (12%), Positives = 148/525 (28%), Gaps = 90/525 (17%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 D A R ++ + E L VG+ + + G D Sbjct: 209 DDATRESWNRRLSYVMIDEYQDTNRSQYELMRLLTEQHQNVCVVGDEDQSIYSWRGADIK 268 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPL 370 +L F P ++ + +N A AG +E K+ Sbjct: 269 NILD----------FEKDYPRAKTIRLEQNYRSTKNILAAAGAVVENNKARKGKKLWTES 318 Query: 371 DSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 DS + + + + E + D L +P + ++ Sbjct: 319 DSGELLGLYAGYDSENEALFIADTTEKYLASNPG---DHVAILYRTNSQ-----SRQIEE 370 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A Y + + ++ ++ L L S S ++ +++ P I Sbjct: 371 ALRRYGRKYNVVGGFSFYQRAEIKDMVAYLKLASSNVDSVSLMRVINTPA----RGIGRT 426 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + + ++ + G+ + R++ Sbjct: 427 TVEQIERYGRDHGL--------------------NLWESIERIIDDQ------------- 453 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV--CRDMLNAFFLPDAETE 606 + S + +L+ +L++ + + L R ML E+E Sbjct: 454 ---QLSTRSQSSLVVFRNLIQELSLVASTSSLPDLIRHILERTGYRKMLQQ--EKTPESE 508 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + +++ A + L D A D + ++ V + TL Sbjct: 509 TRLENLDELINAAADAHERGE-----TLGDFLDNAALVADVDSYDEQSP---VTLMTLHN 560 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F +V L GM G++P + + + ++ + + A++K Sbjct: 561 AKGLEFPLVFLSGMELGLFPHSRSMNSEEALEEERRL------------CYVGMTRARKK 608 Query: 727 LYISYIGRSIQDN----SERFPSVLVQELIDYIGQSHYLPGDEAL 767 L +++ + S + E+ + + + + Sbjct: 609 LVLTWAKMRRRFGGGEQERSTASWFLSEVPENLIFNLGPRDEPGE 653 >UniRef50_C5TB61 UvrD/REP helicase n=3 Tax=cellular organisms RepID=C5TB61_ACIDE Length = 778 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 60/530 (11%), Positives = 124/530 (23%), Gaps = 88/530 (16%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP---------LLA 301 I P L + R L + ++ + VG + Sbjct: 272 ISMPLRLLRDHPEVRAKWQALLGHVLVDEYQDTNATQYELLKLLVGERGHFTAVGDDDQS 331 Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 +G G + L L L + A + Sbjct: 332 IYGWRGA-TLDNLKKLPQD------FPQLKVIKLEQNYRSTSAILRAANNVIGPNPKLFP 384 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE-DPTLTPRDIIVMVADIDSYSP 420 + + + E E R+ ++ +P + ++ + Sbjct: 385 KTLFSELGEGEPVRVVDADTEEHEAERAVARIQSLRAASNPPPDWKSFAILYR-----AN 439 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 F A +PY +S + ++ + L + L + P Sbjct: 440 HQAKPFEKALRRANIPYKVSGGTSFFDRAEIKDLCAWFRLWINNDDDPAFLRAIGNP--- 496 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 + I L L + + Sbjct: 497 -KRGIGHTTLAALGAFATQHKQSMFG---------------------------------- 521 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + +LP + + L +N E+ D L Sbjct: 522 -ALFNGMLPAA----VPKRALDGLHEFGRYINDLEHRARHTHGAEDARAFLADWLKEIGY 576 Query: 601 P-----DAETEAAMTLIEQQWQAIIAEGLGAQYG------------DAVPLSLLRDELAQ 643 ++E G + L + + Sbjct: 577 EQHLYDGEDSEKVAAARWSNVMEFCDWMAQRAGGQIDDTAGAVVARETKSLLEVSQTI-A 635 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 L ++ V + TL + + + V L+G+ +G+ P +L QK Sbjct: 636 LLSTISEREKE-QDMVTLSTLHASKGLEWPHVVLVGVTEGMLPFKLDDDEG--RQQKVTD 692 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQEL 751 R ++R L + AQ+ L +S+ + + PS + E+ Sbjct: 693 DTLQRLQEERRLMYVGITRAQRTLAVSWTKKRKKGREMVAAQPSRFIAEM 742 >UniRef50_C7R1Q8 UvrD/REP helicase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R1Q8_JONDD Length = 1103 Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 111/975 (11%), Positives = 238/975 (24%), Gaps = 136/975 (13%) Query: 143 PDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATT 202 D + W+ + L A +E+L Sbjct: 164 SDIVDHWQEDLDTDYAVSTMTDAVV---TLAGELADHLLTVPEAATQLDHLLESLADLPL 220 Query: 203 CPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLT 262 L V G + L + ++ + + + + A LA+ Sbjct: 221 AGRSLAPSVAKLGKQLATKR--RLLDLVSEYHRVK--RHSESMDFSDQVVLAAELARDHP 276 Query: 263 RQRRHSFEDRELPLFRDSENAG--QLFNSDGEQDVGNPLLA-------SWGKLGRDYIYL 313 + L + ++ Q+ G+P+ A +G G Sbjct: 277 FVADTERRRFAVVLLDEYQDTSYAQIQLLTALFGDGHPVTAVGDPNQSIYGWRGAS-ASG 335 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSD--ILELENR-AVAGVNIEEFSRSDNKRPLDPL 370 L+ + +L + ++D IL +R A+ + Sbjct: 336 LTRFPRDFPRPNGTPASIASLSTSWRNDAQILSAAHRIALPLASASALPLPTLSTRPGAG 395 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 S+T S Q E + + D T V+ + + Sbjct: 396 TGSVTVGYYLSAQDEAQGIADFFTRHFVPGMTTA----AVLCRARKQF-----PLLEETL 446 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 + LP + P + +S+L + + ++ LL P RF + + Sbjct: 447 RNAGLPVEVVGLGGLLHTPEIRDLVSMLEVVHDPSRGDSLMRLLTGP----RFHLGAHDI 502 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV--- 547 L W E R R A + + L ++ + Sbjct: 503 HTLGVWARELSSRAHGYSGPPRGALREAADERSIVDALAQLPPRSWQGHHGETFSEAGYE 562 Query: 548 ---LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 L + L + L + + D Sbjct: 563 RLTQLSALIDALRQQTYLALPEFVDATER---ALGLDVEVALRAAHRHAETGTTDPSDPW 619 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 A + + + + G + + + LD+ +++ T+ Sbjct: 620 GRAHLDAFRSVVTDFVHQAVHPTLGALLAWLDDARDRERGLDRPTGHLDP--HAIHLITV 677 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQ---------------------------LAPLGFDLM 697 + + + +V + ++DGV+P L + Sbjct: 678 HAAKGLEWDLVAVPALSDGVFPSTATTTPRGPTDSGWTSHLGALPFSLRGDAPDLPHLSL 737 Query: 698 SQKPKRGDRSRR-------------DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 + + +RR ++R L A A+ L ++ + P Sbjct: 738 ADADHDAEIARRLTEFTAQCGHYQVAEERRLAYVAYTRARTALLVTGAWWRTGK-TATPP 796 Query: 745 SVLVQELIDY----IGQSHYLPGDEALNCDES-----EARVKAHLTCLHTRMPFDPQNYQ 795 S + EL+D I PGD+ + + + +T + ++ Sbjct: 797 SPFLTELLDIDGVQIADLVTEPGDDNPHPPDGDTAVWPQSLVDDITKRAADLVMSTRHNG 856 Query: 796 PGERQSYAR-----EWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQ 850 L ++ + + P+ V + L A F Sbjct: 857 RPILDHIGPVQVHGVDLAQRARQVLNVQQRPRGSSVIFPDHVSVSGLVELSAD-REGFLT 915 Query: 851 MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYG 910 + R + R + + + +G Sbjct: 916 QYQRPIPRQPSPQS-----------RRGTTFHLWVEQFYGHTPLFDMDDLDNTSDSDDHG 964 Query: 911 AFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGL------ 964 + + +Q R +ID+ GV I + V D Sbjct: 965 --TDRTLDELKATFEQ--SRWARLTPKELEADIDVVIAGVVIRARIDAVFDDPDRPGGVI 1020 Query: 965 -LRWRPSLL------SVAQGMQLWLEHLVYCASGG-----NGESRLFLRKDGEWRFPPLA 1012 + W+ + +QL + L + G + ++ +D L Sbjct: 1021 VVDWKTGRAPTTDADQRHRNVQLAVYRLAWATWSGCDINDVTAAFYYVAQDLTVIPDQLP 1080 Query: 1013 AEQALHYLSQLIEGY 1027 L +L+ Sbjct: 1081 E---REELERLVRHA 1092 >UniRef50_D2MLK1 DNA helicase, UvrD/REP type n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MLK1_9BACT Length = 1180 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 88/740 (11%), Positives = 196/740 (26%), Gaps = 132/740 (17%) Query: 351 AGVNIEEFSRSDNKRPLDPLDSSITFHVCHS---PQREVEVLHDRLLAMLEE-------- 399 E + + + +I + E +++ R+ M+ + Sbjct: 487 NENEFEVEYEALTQARHAKTNGAIEILIGQDGDPSANEYKLIAQRIENMITDAAETIRVR 546 Query: 400 -------DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 + + DI +++ + + A + +PY + + Sbjct: 547 DKDGKLSERPIQYDDIAILIRA----RTHLPDI-EHALLEAGIPYLTTGGIGFYQRQEIY 601 Query: 453 AFISLLSLPDSRFVSE-DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 + L+ ++ S + A+L P F I++ L + Sbjct: 602 DIWNYLNFLNNPSDSNISLAAILRSPA----FGISDAELYEIS----------------- 640 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 L + + W L Y + L + L Sbjct: 641 --------------------LQKETKQEKKSFWDKTLDYQGCT-------EQLRCAIDTL 673 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 A+ P+ + + + T +Q ++ + Sbjct: 674 KTHIE-FARRMPVNRLVGTIVN--ETGLIGTLRTGKQGKQRWANYQKLLDLARNFDGDEN 730 Query: 632 VP-LSLLRDELAQRLDQE----RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND---- 682 L D L + +E + + +G V I T+ + F VV L ++ Sbjct: 731 RQILPDFIDFLDILITEEPREGQAPIKASSGAVQIMTVHAAKGKQFPVVMLPRLDKKGQT 790 Query: 683 GVYPRQLAPLGFDLMSQKP----------------KRGDRSRRDDDRYLFLEALISAQQK 726 P A G P R + + + LF A+ + Sbjct: 791 DQEPFIDAEFGIGFSPLHPANDYQKTEPAIVNFMKSRANEKNVAEKKRLFYVGATRAEDR 850 Query: 727 LYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 L +S R + + ++ + L D + ++ + + H Sbjct: 851 LILSGTLRDNS--KPQQMLEWLYTHLEIGEADNLLNLDVKQDVYKNGSTIDQHFRLQ--- 905 Query: 787 MPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVR 846 +P + + + E +P + P +P + L + P+R Sbjct: 906 IPISRTLTDTTDTDAASDETMPIEFPEDLPSALQ----PTEVPTALSAPELANYARCPLR 961 Query: 847 AFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRF-RAAG 905 + L++ + PD++ ++ Y + Q + E D + L R +A Sbjct: 962 YQLENVLRI--PSIKQAEPDSDENEMKNAILYVLMQ-----IREPSDTQNLDTRIQQAFE 1014 Query: 906 DLPYGAFGEIFWETQCQEM--QQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDG 963 + P A E +L + + + I +G + G + ++ D Sbjct: 1015 NFPEIADAETELRKHINSFLDSELGQTALRASETETNQHIYADVDGHILDGRIDRLFRDE 1074 Query: 964 LLRWR---PSLLSVAQGMQLWLEHLVY------CASGGNGESRLFL----RKDGEWRFPP 1010 W+ E +Y C + + F Sbjct: 1075 TGHWQAIIYGTGDAQHPTVCSPEMELYSLLIHRCYPEQPTVKINIFFTEQGQCEKGHFST 1134 Query: 1011 LAAEQALHYLSQLIEGYREG 1030 +A + I + G Sbjct: 1135 TELAEAAGRWRKKISALQRG 1154 >UniRef50_A4F8N4 Possible ATP-dependent DNA helicase n=2 Tax=Pseudonocardineae RepID=A4F8N4_SACEN Length = 1051 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 104/786 (13%), Positives = 207/786 (26%), Gaps = 99/786 (12%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYI 311 DP L R R +D + + +L + + G+P A + G D Sbjct: 235 DPDLLHVERQRVRHLLVDDAQHLDPQQYWLLQRLGSTAAEFVLAGDPDQAVFTFRGAD-- 292 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 + + ++ + + + AV + +R +P D Sbjct: 293 --------PGSVRDADPDGGNTVVLTVDHRMSKAVRAAVQRLAERLPGAGPQRRLAEPED 344 Query: 372 ---SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 S+ + S +E + D+L D + D+ V+V P ++ + Sbjct: 345 CPGGSVQVRLHASEAQEAAWVADQLRRAHLLD-GVPWSDMAVVVRSTGLSLPVLRRALLA 403 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR--FVSEDVLALLDVPVLAARFDIT 486 A LP D + ++LL + LL + A Sbjct: 404 ASVPLVLPV---DDVPLAQRTAVRPLLTLLRCAGRPQALDPDSAAELLASSLGGADPLAL 460 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 R LR+ +G D LL + Sbjct: 461 RRLRRGLRRLELAAGGSRSSGD-----------------------LLVEVLRGDDALAAL 497 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 + +A L+ + L + + + A+ + Sbjct: 498 DDSSAGPARKVAHLLKVAREAVDDGRSVEEVLWRVWQASGLQQRWLTVAERGGITGAQAD 557 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + + ++A D + Q V++ T Sbjct: 558 RDLDAVVSLFEAAAQYVDRLPGADVAGFADYLT-GQQIAGSSLAPSAPKENAVSVLTAHA 616 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFD-----------LMSQKPKRGDRSRRDDDRYL 715 ++VV + G+ +G +P + + ++R L Sbjct: 617 AAGQEWEVVAIPGVQEGTWPDLRLRGSLLGVERLVDVLSGVDAADRVSATAPLLAEERRL 676 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 L A A+ L +S + + PS + EL + E Sbjct: 677 LLVAASRARSGLLVSAVR-----GEDEQPSRFLDELEGVVSD---PDSAERPIARPERGL 728 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF--------- 826 V A L ++ D Q ++ A+ A + AH + LP Sbjct: 729 VLAELVGELRQVVCDVQAPARRRERAAAQLARLADAGVPGAHPDTWYGLPPSSCQSPLVE 788 Query: 827 -TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL 885 P V T+ P+R + E + G + + Q Sbjct: 789 GDEPVRVSPSTVDTLSKCPLRWMAERHGG---------QDTAELASVTGTLVHALVQAAA 839 Query: 886 NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ----SM 941 + E+ R + D F + ++ ++A R Sbjct: 840 DGATEEQ-LHRALDEAWESVDAGAPWFSRKERARVERMIESFQAWLVASRAELTQVGVER 898 Query: 942 EIDLACNG------VQITGWLPQVQPDGLLRWRPSLLS------VAQGMQLWLEHLVYCA 989 ++DL G +++ G + +++ DG R + + + VY Sbjct: 899 DLDLTIEGRDGGPSLRLRGRVDRLEADGEGRPVVVDVKTGKTPVSKNDAEEHPQLAVYQL 958 Query: 990 SGGNGE 995 + G Sbjct: 959 AAALGA 964 >UniRef50_A9H0P3 UvrD/REP helicase n=3 Tax=Alphaproteobacteria RepID=A9H0P3_9RHOB Length = 868 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 52/400 (13%), Positives = 114/400 (28%), Gaps = 58/400 (14%) Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 +I ++V + F LPY + + ++ + S Sbjct: 447 EEIAILVR-----ASHQMRAFEDRFLTIGLPYRVIGGPRFYERMEIRDAMAYFRVVVSPD 501 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL----PATGQ 521 +++ P + + ++ + ++ +G+ L T Sbjct: 502 NDLAFERIVNTP----KRGLGDKAQQTIQVTARANGVSLFEGARLAVAQGLIKGKGGTEL 557 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 G+ R + + + V+ D G +A LA +++ + + E Sbjct: 558 RKLVEGIDRWIA--MLHQRKHVDGDVVIDDGGEGALAFSHIELAEVILDESGYTTHWQNE 615 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + E + + + + L + + Sbjct: 616 KTPEA----------------PGRLENLKELVKALENF------------ENLQGFLEHV 647 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 + +D E V+I TL + + F +V L G DG++P Q + L Sbjct: 648 SLIMDNESDD---GGAKVSIMTLHAAKGLEFPMVFLPGWEDGLFPSQRSMDESGLKG--- 701 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSH 759 +++R L + A++ IS++ + PS + EL + Sbjct: 702 -------LEEERRLAYVGITRAEEVCTISFVSNRRVFGQWQNAMPSRFIDELPQAHVEVL 754 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER 799 PG + R H + P + R Sbjct: 755 TPPGLYGGGYGAAAPRSTLHDQAAEANVYNSPGWRRLQAR 794 >UniRef50_Q2IGD2 Putative uncharacterized protein n=3 Tax=Anaeromyxobacter RepID=Q2IGD2_ANADE Length = 1151 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 144/1122 (12%), Positives = 285/1122 (25%), Gaps = 144/1122 (12%) Query: 10 LDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQ--KFGIAANIDFPLP-A 66 +D L V P +LV S A L+ L++ + A F P Sbjct: 49 IDTLGD-WADAVAALPAPGPLPARTVLVPSERHAHALRRELARTGRDAALAGTRFLGPLT 107 Query: 67 SFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQ 126 + I + +P P E A +L+ L + L L H+ D + + Sbjct: 108 AAIEVLQAAGVPFTPGEGALRPA----RLLALFHEDL------PLEHFDLDLLRTTRGWD 157 Query: 127 --LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRW 184 + DL A + A A LW + + Sbjct: 158 EAFAGAIGDL-----------EAAGLAPRDLPAEPAAARDLARLWSRVEDGAGTSFSS-- 204 Query: 185 HRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPC 244 A +++ L P + + A V + L+A+ + L Sbjct: 205 --ARIFREAAALLARDAGAWPFHGPTLALASGHADA-VEARFLRAIPG---VRLAVQT-- 256 Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWG 304 D + L R R + L D ++ V P S G Sbjct: 257 --------DRPAGERHLERVERLFGAEARSALAARGSTGSPRAEEDRDRAVRTPARGSTG 308 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK 364 A D L + +D L + A + Sbjct: 309 SP---------RAGGPGSSPAGRVTERDLLATYLLADAAVLADPA--------------R 345 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 D ++ + E+E + + E +I V+V D D + + Sbjct: 346 PRSGGPDGTVDLEEHAGVEAELEATALWVARQVLEAR-RPLEEIAVLVPDQDPLAGLVAD 404 Query: 425 VFGSAPADRY-LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 P D LP ++ S ++++ S +E + +L L Sbjct: 405 RLARLPFDGGPLPVFVAGGLPAISTAAGARILAVVRALRSHLSAETLAPVLPALRLEGVV 464 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 D L + G+ + L +G+ R G L Sbjct: 465 DGDRTHLTHGEAMELAFGLGIVGGNPAHPAGALAWSGRAAARAGELEAALAQVHADDDSA 524 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 + + + G + + L L R + + PL V L L Sbjct: 525 ERERWRLERTLGS----LRAIRPALDALVGVARAVVEGAPLAAIGDVLGGFLTRCLLAPG 580 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ-RFLAGPVNIC 662 E + + +A G A+ + +L R++Q RF V + Sbjct: 581 EGA----ALPARLVEALAPACAGSLGKALSGDDALQVVEDQLLGLRVAQGRFGEPAVYVG 636 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS-----RRDDDRYLFL 717 T+ + F V ++G+ +GV P Q + + + + RR +DR Sbjct: 637 TVAGAAGVSFGAVRIVGLCEGVLPSQPREDPVVPGALREQLERGAPDRVLRRAEDRVAAQ 696 Query: 718 EALIS-----AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 + A+ + +S + ++ + + Sbjct: 697 AHALVAAVRGARDAVALSAPRVDLARTEREPGAIFID--AAAALARPHAATGAPAEAVPD 754 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHS-------------- 818 A ++ ++ P S+ A + Sbjct: 755 GAALRRDAFRPAASAAARFRDAHPISDASWLDRVARTAPALPPEWTGTPVVDLARLAALR 814 Query: 819 -----------------EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 F + L + P + L + Sbjct: 815 APSGPLGPSDGIFDRGGPFPPVPGIAPERPISASALGQLLQCPRLFLMRRILGWDEPASA 874 Query: 862 SEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGA-FGEIFWETQ 920 + + L+ LS + +++ + A R R A L + ++ Sbjct: 875 PSLRE-----LDPLSFGSLLHRVVELFYREHGAAFSRREGRLARWLELARGVADRAFDGL 929 Query: 921 CQEMQ------QLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSV 974 E +L +R + + D + G + Sbjct: 930 LSEYPLVGEGVRLKERERLHDALREFLAYDWKGGPRRFVGVELPFGTPEAPLSVEADGET 989 Query: 975 AQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAP 1034 +++ + +G + + K G+ + + Y+ Sbjct: 990 LHV-HGYIDRV----DAEDGVTLVRDLKSGKAHPRAGSEAGPTALRDVQLGLYQLAARKL 1044 Query: 1035 -----LLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKF 1071 A+ + + A D L++A ++ Sbjct: 1045 ARRWGTPAKVHGAYAYASGRGEVEERAFRADAGALEQATAEW 1086 >UniRef50_Q123W9 UvrD/REP helicase n=16 Tax=cellular organisms RepID=Q123W9_POLSJ Length = 716 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 70/529 (13%), Positives = 143/529 (27%), Gaps = 83/529 (15%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 I P L + R + L + ++ + VG + +G D Sbjct: 204 IGLPLKLLREHEAVRNKWQQSLGHVLVDEYQDTNATQYEVLKLLVGTR--GRFTAVGDDD 261 Query: 311 IYLLSDLESSQE-LDAFVDVTPDNLLHNIQSDILEL-ENRAVAGVNIEEFSRSDNKRPLD 368 + ++ + L + P+ + ++ + A I + K Sbjct: 262 QSIYGWRGATLDNLKKLPEDYPNLKVVKLEQNYRSTSAILRAANNVIGPNPKLFPKTLFS 321 Query: 369 P--LDSSITFHVCHSPQREVEVLHDRLL------AMLEEDPTLT-PRDIIVMVADIDSYS 419 + C S + E E + R+ + +D V+ Sbjct: 322 ELGEGEPVRVVDCDSEEHEAERVVARIQSLRAGGELQAVGSQYKEWKDFCVLYRANHQAK 381 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 P A +PY +S ++ ++ S + L + + + + P Sbjct: 382 PL-----EKAFRKAQIPYKVSGGQSFFDRAEIKDLCSWMVLLVNNDNNPAFMRSVTTP-- 434 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + I L L + ++ Sbjct: 435 --KRGIGHTTLGTLGTFADQY--------------------------------------- 453 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF- 598 ++++ SS L A+ VG L LN + E+ D L Sbjct: 454 KLSLFEALFSNSLSSVLPAKAVGSLQEFGRYLNELEYRARRTVGAEDARTFLNDWLKEID 513 Query: 599 ----FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS---------LLRDELAQRL 645 ++E G S + + + Sbjct: 514 YEKHLYDGEDSEKVAAARWSNVMDFCDWMALRCGGQIDDTSGAVVESEKKTMLEVVQTIA 573 Query: 646 DQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 IS+R V + TL + + + V L G N+G+ P +L Sbjct: 574 LLSTISEREGDQNVVTLSTLHASKGLEWPHVMLAGCNEGLLPFKLEEDDGSNTDNIAL-- 631 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQEL 751 R ++R L + AQ+ L ++++ R ++ PS + E+ Sbjct: 632 ---RLQEERRLMYVGITRAQRTLAVNWLRRRKKNRDTIAGIPSRFIAEM 677 >UniRef50_A6W771 UvrD/REP helicase n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W771_KINRD Length = 1128 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 87/678 (12%), Positives = 165/678 (24%), Gaps = 122/678 (17%) Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V+ + V A D LP + + P + ++ L + + Sbjct: 451 AVLCRKRSQF-----TVLQRALRDAGLPVEVVGLGGLLTTPEVADVVATLHVLHDPARGD 505 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 + LL AR+ + L L W R + E P + Sbjct: 506 HLARLL----TGARWRLGARDLAALGAWARHLQHRRAGLPPDPHE---PGEEPLVLPDEV 558 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 + L A++ G S S + LA++L +L R L + E Sbjct: 559 EAVSLVEALDDLPGAGWSGPDGRSLSPRAHARLSRLAAVLRRLRN-RTHLPVPDLVGEVE 617 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR---- 644 + P + +A ++ A + L L Sbjct: 618 RALLLDVEVAARPGSSPASARANLD---ALADAAASFSAGSQRPGLGGFLAWLDAAEVRE 674 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL-------M 697 E+ + V + T+ + + + VV + G+ + +P L + Sbjct: 675 RGLEQGASEVSTDAVQLLTVHASKGLEWDVVAVPGLVERTFPASGETDPGWLGGSGALGV 734 Query: 698 SQKPKRGDRS------------------------------RRDDDRYLFLEALISAQQKL 727 P RGDR + ++R L A A+++L Sbjct: 735 LPYPLRGDREGLPRFDVEGAGTQKELDTARQRFLEACGQHQLAEERRLAYVAFTRAKEEL 794 Query: 728 YISYIGRSIQDNSERFPSVLVQELID----YIGQSHYLPGDEALNCDESEARVKAHLTCL 783 +S R PS ++E+++ + +P A R + Sbjct: 795 LLSGAHWDDAA-KPREPSRFLREVLEAPRGAVPGLVVVPPAPAPEPGAPNPRTANPQRVV 853 Query: 784 HTRMPFDPQNYQPGERQSYA-----------------------------REWLPAASQAG 814 P + + + W + Sbjct: 854 WPVDPLASRRVEVAAGAALVRAAMAERAAGGAAGPEAGGPEGGAVDEETAAWAEQSRLLL 913 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 + LP + L P L + R + P Sbjct: 914 TERATAHDAPGVLLPAHLSASRLVTLAQDPDA------LALQLRRPVPQEPRP------A 961 Query: 875 LSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC 934 R L L +A + + + LA A Sbjct: 962 TRRGTAFHAWLEQRFTASSLLDLVDLPGSADEDAADDAELEALQR-----RFLASEWAAR 1016 Query: 935 RQPGQSMEIDLACNGVQITGWLPQVQ----PDGLLRWRPSLLSVAQG----------MQL 980 + ++ + + G + V DG RW + +QL Sbjct: 1017 DPVAVEVSVETPVADLVVRGRVDAVFAAVGADGRTRWDVVDWKTGRPPEGEAARARDVQL 1076 Query: 981 WLEHLVYCASGGNGESRL 998 + L + G + Sbjct: 1077 AVYRLAWSRWRGVPLEDV 1094 >UniRef50_A8ZYJ7 UvrD/REP helicase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYJ7_DESOH Length = 621 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 74/514 (14%), Positives = 151/514 (29%), Gaps = 95/514 (18%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 + + R E L + ++ + + S+ G D+ Sbjct: 181 LVRTHDMLNNRIDIREKYQEVFCHLLVDEFQDTNPAQMEILKLLIPENRQGSFWCTGDDH 240 Query: 311 IYLLS-DLESSQELDAFVDVTPDNLLHNIQSDILELENR------AVAGVNIEEFSRSDN 363 + S S + F + PD+ Q IL + R A I + + Sbjct: 241 QAIFSFTGASVGNIIHFKSIFPDS-----QQMILHVNYRSTPQILAACQNLIRHNEKQIH 295 Query: 364 K--RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 K + +P + S + E L + L+E +D+ V+ + S Sbjct: 296 KTLKTDNPDGEEVIVLESSSEETEAINLVHEI-QTLKESTDYDYQDMAVLYR-CNFQSRI 353 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE---DVLALLDVPV 478 I+ VF +PY I + ++ + L + S E + +L+VP Sbjct: 354 IEEVFSQ----HKIPYHIENGLCFYDRREVKILLDYLRVISSPETDEGDEALAGILNVP- 408 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 I + + LR + E Sbjct: 409 ---NRYIGRKFIGELRSFAAEKQFH----------------------------------- 430 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 ++++ + I + + L L L RP E V + Sbjct: 431 ----LYRALKELPVTLPYIRKNIQALTGFLDPL---ISEAGHIRPAEAISLVRTSLDIDR 483 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 ++ + + + + Q ++ + D A E +S Sbjct: 484 YVSEEDMPSPDDVKIQNMDQLLLSAARYD-----DIRAFLDY-AAGFQNESVSDN--REG 535 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 V++ T+ + + F VV L+GM +G+ P + +++R + Sbjct: 536 VSLMTIHKAKGLEFPVVFLVGMVEGILPTRRN----------------ENIEEERRICFV 579 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 A+ A LY+S+ + S + E++ Sbjct: 580 AISRAMHLLYLSHYMTCL--GQAARTSRFLCEIL 611 >UniRef50_C1V6P7 ATP-dependent exonuclease V beta subunit, helicase and exonuclease domain-containing n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1V6P7_9EURY Length = 1152 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 94/802 (11%), Positives = 204/802 (25%), Gaps = 123/802 (15%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR 308 ++ + ++ R ++ + + L D VG+ A + G Sbjct: 347 AELMESPVGEEIAARWDYVFCDEFQDTDRLQFDLVKSLVTDDNLFVVGDDDQAIYEWRGA 406 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 + +L+ + + + + + IL+L N A+ ++ E ++ + Sbjct: 407 HVANITDELDRAFAALSDEPLEEN---FRSRQPILDLANEAIQKLDHRERHKTLKRVDEP 463 Query: 369 PLDS-SITFHVCHSPQR-----EVEVLHDRLLAMLEE--DPTLTPRDIIVMVADIDSYSP 420 D +I ++ + LL+ E D P DI ++V D +P Sbjct: 464 EYDGDTIATVELSDEDDADGASQLRTVVQNLLSGAAESFDEAYDPGDIALLVRKNDHATP 523 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 I+ D +PY ++ A + + L +L Sbjct: 524 VIEE-----FEDAGIPYQVAGDLA-TESVGVGTVTAYLKALARPEDEVSWNRVL-----L 572 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 R+ + + L R L Sbjct: 573 MRYRLCDTDL---------------------------------------RKLNAGDDPLV 593 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 ++ L E +AE H+ LL + L D+ N + Sbjct: 594 DTLRETPLDEFEEPDRVAEARKHVTELLA--------IRDSASLSHLYRELTDVTNIEWY 645 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV--PLSLLRDELAQRLDQERISQRFLAGP 658 + + +E + + L + Sbjct: 646 LSEQERRDLAQLEDVIEQYGDSAVQPPLTPEFIDSLEHYDSLFDESGSSPTSQPDVADDA 705 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD------ 712 VN+ T+ + + F VV + + G + + +D + G + +D Sbjct: 706 VNVMTIHKSKGLDFPVVLIPQVTAGEW--APSSRTYDALETSLSDGAEAAFAEDFVERDA 763 Query: 713 ---RYLFLEALISAQQKLYISYIGRSIQDNS-----------ERFPSV-----------L 747 R +F + A+ L + G S D++ E PS L Sbjct: 764 RETRRVFHVGITRAEDVLVL--QGGSEDDDATDVHPVSESVDEILPSRIPWQPERGQLPL 821 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 ++ D + + D + + + E Sbjct: 822 WADVQDCLPREAVDWTDTLATETVGHVGGTVNHAGEELAVAAARDRVLDLATATLNGELS 881 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 P A + + P + + +L + P + + +++ + Sbjct: 882 PRAERETLQVASLTDPSTPSPSLSHSYTSLAAYEECPRSHYLDYVVNAFPDYQETTVRSD 941 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 + + +Q +R ++ E ++ Sbjct: 942 SGGGVSQREIGLLFHDTAEQAAKQG-----VKRRGDWYEICERLASHRRAEDALTAAKEC 996 Query: 928 ADRVIACRQPG-----QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSV-------A 975 DR P E +L +G ++ G++ V Sbjct: 997 IDRYFELELPNCEIIDAEREFELDIDGHELVGYIDAVYRTPDDGLLVIDYKATERHRDLE 1056 Query: 976 QGMQLWLEHLVYCASGGNGESR 997 QL + L C +R Sbjct: 1057 DDKQLPIYLLACCDLYDEPVTR 1078 >UniRef50_A0LVT8 UvrD/REP helicase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LVT8_ACIC1 Length = 1095 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 79/642 (12%), Positives = 156/642 (24%), Gaps = 75/642 (11%) Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 D S+ +P + + L L + V+V P Sbjct: 391 ADGDGSVDVRAFATPGAQAAYIAYHLRHA-HLVEGLGWTAMAVLVRSAAQIPPL-----R 444 Query: 428 SAPADRYLPYAISDRR-ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 A +P + ++ P++ + L + + +L + P Sbjct: 445 RALTAAGVPVRVPEQSSPIVDVPIVRHLLLALRIAAG----QPLLDVERAP--------- 491 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 L + + I G D A + G R Sbjct: 492 -TAAASLAEELVAGPI--GRADPLQLRRLRIALRRLDRAAGGERSSAVVL----AQVLND 544 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP-----VCRDMLNAFFLP 601 + A +A + A W + ++ Sbjct: 545 PRDLEVIDEQAAAPALRVARAIEAGRRAVTEPAATAETVLWEIWNATGLATELYAQALSG 604 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL--AQRLDQERISQRFLAGPV 659 A AA ++ A +L D L + ++ V Sbjct: 605 GAVGAAADRDLDAVMALFAAASRYVDRLPRAGAALFADYLLGQEIPTDTLAARAPEPDGV 664 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD-------------- 705 ++ T +S + VV L G+ +GV+P + D Sbjct: 665 DLLTAHAAKSREWDVVVLAGVQEGVWPDLRRRGSLLGLRDFLDVLDGRIADAADRGPGGS 724 Query: 706 -------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 + ++R L A A++KL ++ + PS + ++ Sbjct: 725 IRTLEERSAALAEERRLCYLAASRARRKLIVT-----AVSGDQEIPSRFLDDIDPLDADE 779 Query: 759 HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHS 818 L S + + G Sbjct: 780 RPLTRPPRGLDLPSLLGDLRRAAETADDAVARRAAGHLAQLAAAGIPGAAPDGWYGLPAP 839 Query: 819 EFVQPL-PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR 877 QPL P V L+ F P+R + R S + + Sbjct: 840 STDQPLRRDDEPVPVSPSRLELFTRCPLRWLLESCGG---RGRSSASQVVGTAVHRAAAT 896 Query: 878 YQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA--CR 935 + ++ L ++ A+ DL G F + +++LA + R Sbjct: 897 FSVDVAQLRERLDAALADT---------DLGTGWFAAAQRDRAAAMVERLAAWMARNPRR 947 Query: 936 QPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQG 977 + + +TG + +++ D R L + Sbjct: 948 LLAVERDFQVTVGRALLTGRVDRLEQDDDGRLYVVDLKTGRR 989 >UniRef50_C6XGC2 DNA helicase II n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGC2_LIBAP Length = 685 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 55/475 (11%), Positives = 135/475 (28%), Gaps = 85/475 (17%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSD------ILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 + F D + ++ + IL N+ ++ N + F + + D Sbjct: 283 AQFSHILNFQKDFKDANIIKLEQNYRSTTHILNTANKLISH-NKQRFDKKLFTQRDCHDD 341 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 + ++ HV S E+ + ++ ++ +I ++V F A Sbjct: 342 AKVSIHVSQSDNSELST--IIQEIINIQNTGMSLNNIAILVRTSWQTRK-----FEDAFL 394 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 ++ +P+ + + + ++ L ED +++ P + I +E L Sbjct: 395 EQEIPHKVIGG-SFYDRQEIRDALAYFRLVCQEHRDEDFKRIINCP----KRGIGKESLH 449 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 ++ ++ I Q+ Sbjct: 450 KIQYHASQHHI---------------------------------------SLLQASEKLI 470 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 +S ++ L + + + W + P + + ++ Sbjct: 471 DSGQFRPQIRQSLQNFVKDIRRWNNCSKKMDPAPIANMILEQSGYMAMWKNNKSSEKSQE 530 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + +++ + L L L + S + + I TL + + Sbjct: 531 RLDNLRELLSIIEKHE-----TLEGF--VLQAPLRENLGSFIPDSNCIQIMTLHAAKGLE 583 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F V + G G+ P QL+ ++ + +R L + A++K ++ Y Sbjct: 584 FDTVFISGWEQGLLPHQLSINEGNV-------------EGERRLAYVGITRAKKKCHLFY 630 Query: 732 IGRSIQDN-------SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 + S + EL D + D E ++ Sbjct: 631 TINRRTHDFTRVERYQPSQVSQFLLELYDPSHTQEIIYDDIYGTFSEHWNQIPEP 685 >UniRef50_UPI0001AEED98 ATP-dependent DNA helicase n=3 Tax=Streptomyces RepID=UPI0001AEED98 Length = 1079 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 110/922 (11%), Positives = 218/922 (23%), Gaps = 113/922 (12%) Query: 128 SSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPR---- 183 + + ADLF + L + E A Q L + H + R Sbjct: 82 AHQDADLF-------AEPLRLLSGPEQDVAVRELLAGQIELGRQGRARVHWPDELRACLT 134 Query: 184 -WHRANLYQRFIETLESATTCPPGLPS------RVFICGISALPPVYLQALQALGKHIE- 235 A+ + + L R ++ YL L A G Sbjct: 135 TRGFADEVRAVLARSRELGLGADALAEFARRGGRPDWSAAASFLAEYLDLLDAQGTLDYA 194 Query: 236 --IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-- 291 +H R Y A + + L + + + G Sbjct: 195 ELVHRAVLLAERPETARQLAETYDAVYVDEYQDTDPAQVRLVRALAGNHGPAVPGAGGGR 254 Query: 292 -EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN--- 347 G+P + + G D +L E+ + D P +L + L Sbjct: 255 TLVAFGDPDQSIYAFRGADVNGILEFPETFRRADG--APAPVAVLTTGRRSGAHLVEATR 312 Query: 348 ----RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 R + R+ + + + E++ + D +L + + Sbjct: 313 LVTRRMPLTRLSADTVRAHRSLSPARDGGRVEAYTYPTTGAELDNIAD-ILRRAHLEEGV 371 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 ++ V+V P ++ A +P I H A + + Sbjct: 372 PWGEMAVLVRSGGHTIPAVR----RALTSAGVPLDIDGNDLPLRHEPAVAPLLTALRAAA 427 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 +D PV D W++ + Sbjct: 428 TAALQDRAEEEAGPVPEPEPDAG--TQDTAPAWLDTETALTLLASPLAALDAADQRRLGR 485 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 R + L E L L R LA+ Sbjct: 486 ALRDEERAAGNPLPPPSDTLLARALAEPERLVTHEGYAHGARLLGELLRRARTLLAKGGS 545 Query: 584 LEE----------WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 EE W + + + + A+ Sbjct: 546 AEEALWELWDGTTWPQRLERSARRGGAAGRNADRDLDAVCALFATAARAEERTGGRGALN 605 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 + + V + T + + +++V + G+ +GV+P Sbjct: 606 FLAEIEA-QDIAADTLTRRAARPDAVRLMTAHRSKGLEWRLVVVAGVQEGVWPDLRRRGS 664 Query: 694 FDLMSQKPKRGDRSR------RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 + + G ++R LF A A ++L ++ + +D PS Sbjct: 665 LLEADRIGRDGLAEPLPPGALLAEERRLFYVAATRAAERLVVTAVKAPAEDGD--QPSRF 722 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 + EL + ++ A L DP+ + R Sbjct: 723 LSEL---------GVEPKDVSSRPRRPLSVAALVAELRATTVDPRVSATLREAAAHRLAK 773 Query: 808 PAASQAGKAHSEFVQPLPF------------------TLPETVPLETLQRFW-AHPVRAF 848 AA P P + L + ++ F Sbjct: 774 LAALTDEDGRPLVPTAHPDRWWGMREPTRSQVPLRDRDAPVVLSGSALDQLANTCALQWF 833 Query: 849 FQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL----FRRFRAA 904 ++ + + L + + L R Sbjct: 834 LGREVKADAPASA------------AQGFGNVVHVLADEVASGRTPADLDVLMERLDSVW 881 Query: 905 GDLPYGAFGEIFWETQ--CQEMQQLADRVIACRQPGQSM----EIDLACN----GVQITG 954 L + A + E + Q +++ + R + + D+ V+I G Sbjct: 882 DALAFDAPWKSVQEKENARQALERFLEWHTLDRAGRTPVASEHDFDITLGAGPYEVRIRG 941 Query: 955 WLPQVQPDGLLRWRPSLLSVAQ 976 + +V+ D R + Sbjct: 942 SMDRVEQDPRGRAYVVDFKTGK 963 >UniRef50_Q02D21 ATP-dependent nuclease subunit B-like protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02D21_SOLUE Length = 987 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 89/667 (13%), Positives = 181/667 (27%), Gaps = 79/667 (11%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 A + +++ + S + P+ D ++ E + R+ A + Sbjct: 214 AEPATSLESLQRYLFSTDAVPVRDEDGTVEIFSTSGEALECVEIARRIGAR-----GIGF 268 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 + +++ + Y P + A +P + R +F++LL + R Sbjct: 269 DECAILLRSPERYQPLV----VEALRRAGIPAHCTRGSRRPD-AAGRSFLALLHCAEERL 323 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 + L + + + + ++ + G R L + Sbjct: 324 SASRFAEYLSLGQMPESE--EPRTPAAWERLLVDAAVIGGAARWETRLRGLREDFE---- 377 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 + + + L + M + L + Sbjct: 378 --------------RRYAAAEEEEERARWRQRIDRLEALRAFAMPVIERLAALPERANWG 423 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 EW+ L F L D + + + I V L + L R Sbjct: 424 EWIETLTA-LAEFTLNDPTRVLELLEELEPMREI----------GPVGLGEVLLVLGPRF 472 Query: 646 DQER-ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 Q + G V + + R + F+ V + G+N+G++PR A L Q+ G Sbjct: 473 QQLSSAPEGARYGKVWVGGIEEARGMAFRAVYVPGVNEGLFPRPPAEDPLLLERQREALG 532 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL--------------VQE 750 + R +D L A A + +SY + R PS V E Sbjct: 533 -IALRAEDTELLGIAAACATEHFALSYSRLDLLTGRVRVPSFYAFAAHRAAGGSEIDVHE 591 Query: 751 LIDYIGQSHYLP--GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG---ERQSYARE 805 + N ++ + L L Q + +S Sbjct: 592 FEKRARSATGTRIGWPAPENAADAIDDAEFDLATLAPLTKGSGQYLKSLPGRAVESLRAR 651 Query: 806 WLPAASQAGKAHSEFVQPLPFTL-------PETVPLETLQRFWAHPVRAFFQMRLQVNFR 858 W+ + A V + TLQ++ P R + L + Sbjct: 652 WMRWHAPWKAADGLVVDEIGDDALKRYRLGARAWSPSTLQQYARCPYRFALRGILGLRAV 711 Query: 859 TEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWE 918 + ++ R ++ ++ L+ + L A + + Sbjct: 712 ENPT-----GIQRMDPAQRGELFHRVQFELLRDLASRELLPVSPATLAGALDRLDAVLED 766 Query: 919 TQCQEMQQLADRVIA-CRQPGQSMEIDLAC----NGVQITGWLPQVQPDGLLRWRPSLLS 973 + +LA + R Q++ DL ++ W PQ P+ Sbjct: 767 VAAKAEAELAPAIPQIWRGEVQAIRADLRGWLQEKALRDADWTPQFYELSFGLKDPAGRD 826 Query: 974 VAQGMQL 980 Sbjct: 827 PRSRKDA 833 >UniRef50_Q10213 ATP-dependent DNA helicase srs2 n=1 Tax=Schizosaccharomyces pombe RepID=SRS2_SCHPO Length = 887 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 69/585 (11%), Positives = 167/585 (28%), Gaps = 114/585 (19%) Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYW----GDIKDPAYLAKLLTRQRRHSFEDRELP 275 PP LQ H + L W D D LL +++ + + Sbjct: 183 PPKELQ------SHQSVELYRLYQTS-LWKNNLADFDDLLLNFILLLQKQPDCVRNIKHI 235 Query: 276 LFRDSENAGQLF---------NSDGEQDVGNPLLASWGKLGRDYIYL---LSDLESSQEL 323 L + ++ ++ + VG+P + +G + L D E +Q L Sbjct: 236 LIDEFQDTSKIQYFLVKLLALQNSDITIVGDPDQSIYGFRSAEIRNLNQMSEDFEGTQVL 295 Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQ 383 + + + I+ + S ++ Sbjct: 296 HLERNYRSAKPILELALSIISQDKSRPKKGLKSNHISSLKPHY--------RLFETNNK- 346 Query: 384 REVEVLHDRLLAMLEEDPTL-TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 E + + ++ P L DI ++V + A ++ +PY + Sbjct: 347 -ESYWIAREIKRIVGSCPELIFYNDIAILVRSSS-----LTRSLEHALSELGVPYRMVGV 400 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + I+ L + ++ S ++ +++VP +I + + + G+ Sbjct: 401 NKFFDREEIRDLIAYLRVLANK-DSTSLIRVINVPP----RNIGKTKIDRIIFESERRGL 455 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 + + V+ + + ++ F + Sbjct: 456 TFWQTLNEVKNENILLSQRNDKSF----------------------------------LK 481 Query: 563 HLASLLMQLNIWRRGL---AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 L S L ++ L + L + + + + + + + Sbjct: 482 SLKSFLCSISKLENRYLSNGHSATLSDLLLGILSEIKYYEYLVRKNKETVEEKWENVMEL 541 Query: 620 IAEGLGA-----QYGDAVPLSLLRDELAQRLDQERISQRFLAGP-VNICTLMPMRSIPFK 673 + + + + +L ++ Q+ V I TL + + + Sbjct: 542 VQQSDNISCIFYELDYKISTIVLLQNFLTQIALVNEEQKEGESQKVTISTLHAAKGLEWP 601 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS--- 730 VV L + + + P + D++R L AQ LY+S Sbjct: 602 VVFLPCLCENIIPHSRSDD----------------LDEERRLLYVGATRAQALLYLSSFK 645 Query: 731 -----YIGRSIQDNSERFPSVLV--QELIDYIGQSHYLPGDEALN 768 + DN + S + +E+ ++ +S + ++ + Sbjct: 646 SVTGMFADMQNSDN-VQDVSPFLKGEEMKRWVMESEIVFNEKIAS 689 >UniRef50_O26572 DNA helicase II n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26572_METTH Length = 916 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 83/722 (11%), Positives = 163/722 (22%), Gaps = 144/722 (19%) Query: 318 ESSQELDAFVDVTPDNLLH----------NIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 + Q + F TP+N + ++ + + + R K Sbjct: 258 DEDQSIYGFRGATPENFIRFREEYDAEVVTLEDNFRSRAGIVLTADSFMRGERHYEKTIK 317 Query: 368 DPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV 425 D + E + + + + ++ + V Sbjct: 318 PVRDGGTDVVILKSRDVNSEARNIVSLIKKLKSSGKIPEYGYVALLFRSV---RNHADKV 374 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF---VSEDVLALLD-VPVLAA 481 +PY + + + + + L+ D + Sbjct: 375 LAE-LRREGIPYIVRGDGSFLKRYEVRSMLYFLAYVDPPDYGGRFRKWDGWWNISRFRGE 433 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 D+T E LR L + +G E A+ Sbjct: 434 FLDLTGETLRALESL-------------------DRNCRLSDFTSRRELEEIGVHGEDAE 474 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 E ++ S+L L Sbjct: 475 KILGLNRIRHEVGKGSLTVLSTFYSILE---------------------VTGYLRRLIED 513 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAV-PLSLLRDELAQRLDQERISQRFLAGPVN 660 +++ A + ++I + G + L L L + + A V Sbjct: 514 GSDSSRAKIFNLAKLSSLIDRYEAIKPGARIQDLLWYLYLLPTHLHHDEAALEDPA-SVK 572 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYP-RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 I T+ + + F VV + + +G +P ++ + + D+DR LF A Sbjct: 573 IMTVHQAKGLEFPVVFICSVINGRFPVKRRKERDTIPIPGELLLSPGEVPDEDRRLFYVA 632 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 + AQ L IS R + + S + +L + G V Sbjct: 633 MTRAQDALIISTAPR--INTRKVGVSPFITDLREKCGIYECD-----------CTSVSRC 679 Query: 780 LTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQR 839 L + P + L Sbjct: 680 LEREWSEEPL-----------------------------------------RINFSALFT 698 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ-INQQLLNALVEQDDAER-- 896 + P R + + RY I + L L Sbjct: 699 YEECPFRYMLIYHYGFVYPETF-------------MQRYGIILHRCLEELHLAMKNSEEI 745 Query: 897 ---LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME--IDLACNGVQ 951 L RR +P G ++ +E+ S+E + + Sbjct: 746 NGALIRRIVERCWIPMGRDDKVKKRRLERELLNYYHDTRDHTGEVVSVEEPFSIPDTDII 805 Query: 952 ITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPL 1011 I G + + +E + +RF L Sbjct: 806 IEGRTDLIIRTRDGELELVDFKARE--HGGVERMALEYQ----LRTYEYALRERYRFDSL 859 Query: 1012 AA 1013 +A Sbjct: 860 SA 861 >UniRef50_C0W6Z4 Possible UvrD/REP helicase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W6Z4_9ACTO Length = 1152 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 125/935 (13%), Positives = 230/935 (24%), Gaps = 194/935 (20%) Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR------DYI 311 A L + R ++ + +LF G VG+P A +G G ++ Sbjct: 271 AALREQYRGVLLDEFQDTSTAQVRLLARLFADSGVTAVGDPNQAIYGWRGASAAALDEFH 330 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 + Q + D + + + A + R P D Sbjct: 331 RAFNP-AGCQAVHRGADPLTTIPVLPLSTAWRNDSRVLEAANALSAPLRHHTPAPGDAPA 389 Query: 372 SSITFHVCH-------------------SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 + H P +E EV+ L L V+ Sbjct: 390 PRVPVEQLHARPRQAGLAEGAVLGAYLADPLQEAEVVASFLADRWNPQAQL-----AVLS 444 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 DS P + A R LPY I + P + +LL++ + + ++ Sbjct: 445 RTRDSLLPVAE-----ALRARSLPYEIVGIGGMLTIPEVADVRALLTVAANPERGDWLVR 499 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNE--SGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 LL I L L G + + Q + Sbjct: 500 LLTAG------GIGAADLAALYAHARRQMRGTSPFQPPADKSSQGASSVAQIPDAEPDSP 553 Query: 531 MLLGYAMESAQGEWQ--SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 ML A+ + L GL L QL RR + PL + + Sbjct: 554 MLAEAIEAVARSADRHPDGLAGVRVPGLSPAATRLADRLARQLRRVRRAMR--LPLADLV 611 Query: 589 PVCRDMLN-AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 + L+ + + + + + D+ L + L Sbjct: 612 TLAEQCLDLDIEVAARVDDRIGRRGLDGLREVAEQFTRDL--DSASLPSFLEWLDAAEAH 669 Query: 648 ERI----SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP------------ 691 ER G V + T+ + + + V ++GMN+ +P Sbjct: 670 ERALSAPEVEPEPGAVQLMTIHASKGLEWDHVAVIGMNEKGFPLYSTQPREDLSVRSKSW 729 Query: 692 ------------------LGFDLMSQKPKRGDRSR----------------RDDDRYLFL 717 F L +P D+ ++R L Sbjct: 730 MGSADEFPHPLRMDAATLPPFTLGVLEPPEVDKDEVKDLLDQYCLALGRYGVSEERRLAY 789 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 AL A+ + ++ S + R S + EL Y PG + + V Sbjct: 790 VALTRARHDVLLTGSHLSKSSTTPRPMSRFLAELRRRDLVQPYGPGWVDFDPEHGNGLVT 849 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYARE-------------------------------- 805 L P + + + AR+ Sbjct: 850 RRARVLWPVQPGAADEAEDRDGVALARQQAAEEVAQACQDASVRLRHESEHSEGDQQAAP 909 Query: 806 --------------WLPAASQ-AGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQ 850 W A + E P LP + L P Sbjct: 910 EAEVDGEPSTLVARWCEEARVLLAEREQEASAPRQLHLPAHLAATQLDALRTDPEE--LA 967 Query: 851 MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYG 910 + L+ + S + +++ L +L E + + + Sbjct: 968 LHLRRPLPSRPSASARLGTVFHDSVTQRLSPHSALFSLEEAGVPDTVSAQ---------- 1017 Query: 911 AFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPS 970 E Q L D + +E ++ +GV + + V Sbjct: 1018 --DRQTLERWLATAQDL-DLLQGYLLHDTEVEREMTISGVTLRCRIDAVFRRE------- 1067 Query: 971 LLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREG 1030 S WL + K G P + LS + + Sbjct: 1068 -GSGEDEPAAWL---------------IVDWKTGRHHVP-------VDQLSVYVHVWAAS 1104 Query: 1031 MSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQ 1065 + P + A++ ++ + +++ Sbjct: 1105 LGIP-AEAVRAAYAYVDYPGGKVDELSGQELLSME 1138 >UniRef50_A8Q3F1 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q3F1_MALGO Length = 876 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 74/539 (13%), Positives = 156/539 (28%), Gaps = 80/539 (14%) Query: 334 LLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL 393 LL + + A++ + ++ + + H E + + Sbjct: 289 LLEQNFRSTPSILDAALSVMQQDKLRIQKGLYTSHAQGAPVVLRAFHDADEEARYIALEI 348 Query: 394 LAMLEEDPTL-TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 L ++ L T DI +++ P +A +PY I ++ Sbjct: 349 LRHVQCTGGLLTFADISILLRFNAQSRPL-----EAALQRHGIPYRILGGLRFFDRAEIK 403 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 ++ L + ++ + VL +L+VP + I + + Sbjct: 404 DLLAYLVVTENPAYTPGVLRILNVP----KRGIGTKSV--------------------QA 439 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH------LAS 566 L Q L R+ A +SV + ++ + + L Sbjct: 440 LLAAAQAEQVPLLTYLERVSPAAAYGMRPAVVKSVSQFVQTIQELRNAAENGSSVADLLH 499 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD----------AETEAAMTLIEQQ- 615 L+++L + L + + +++++ D E + + Sbjct: 500 LVLKLTRYEEHLRPDPDFDSRWENVQELVSFASSIDLPPQSPPSHHGEPVRKRARVSENR 559 Query: 616 --------WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 I+ + PLS + + + + V I T Sbjct: 560 PEDANEFSVHNIVDNVHADEEVATTPLSAFLES-SALASDLGVQEGSPPAMVTISTCHAA 618 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + + VV L DG+YP + + ++ L+ A+ AQ L Sbjct: 619 KGLEWPVVFLPASEDGIYPFYRSTTPEERREERR-------------LYYVAMTRAQTNL 665 Query: 728 YISYIGRS--IQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE----SEARVKAHLT 781 +S+ R + + S R S + L+ H + ++ + S A L Sbjct: 666 ILSWSHRRLVMSEWSSRQLSPFLAPLVSKAHGGHVPLDKKPMSDESWSHVSPPFTHAWLG 725 Query: 782 CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK-----AHSEFVQPLPFTLPETVPLE 835 + + P + + A P Q + P P TLP T Sbjct: 726 VTASILSRSPITLERLNELAEAFATSPTGQQYRRISAQIPSGTPSAPWPSTLPRTDSFT 784 >UniRef50_B2A859 ATP-dependent nuclease subunit B-like protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A859_NATTJ Length = 1048 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 89/756 (11%), Positives = 200/756 (26%), Gaps = 150/756 (19%) Query: 327 VDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREV 386 VD PD+ LH I EL + ++ + ++ I EV Sbjct: 201 VDSLPDDSLHI----IDELTDALNDAHEGDDQIDTWKRKITFNTKEQIDLFSASGESVEV 256 Query: 387 EVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 + + + D L I++ + YS I + +P + Q Sbjct: 257 KQVFSWIR-----DGCLPFDRTIILYSSSSPYSELIYKLSEKY----QIPVTFGEGIMIQ 307 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR--YLRQWVNESGIRW 504 + + LL +S + D+ +LD +L I E L +R+ + E+ I W Sbjct: 308 NTKPGKLLFLLLEWINSGYRVTDLNKILDENLLY----IGEGTLSGYKIRKLLREASIGW 363 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG-- 562 + R+ + E D L+G Sbjct: 364 SRNRY------------------FHRLEKVISELENLEELDDNAIDDNDHSRHQRLLGEY 405 Query: 563 -HLASLLMQLNIWRRGLAQER-----PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 L ++ + E+ L ++ F ++ + + Sbjct: 406 RALYRIINDIFTCLDYQTDEQDPEIISLASLSGCIARFIDEFGQVTSQFDKEAQQRIRDE 465 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR-FLAGPVNICTLMPMRSIPFKVV 675 +I++ + + + + L + ++ R+ Q AG +++ + V Sbjct: 466 LELISQISKSY----LEIDQAIERLKESIENIRVGQELPQAGHIHVDHYQNGWWMLRDNV 521 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR---YLFLEA--------LI--- 721 L+G + +P L ++ + D DR L + Sbjct: 522 YLIGFDADRFPGNRQEDPILLDEERKQISDWLPLGQDRPKENYQLVLDMLKGIADMTGHM 581 Query: 722 -------SAQQ---------------KLYISYIGRSIQDNSERFPSVLVQE--------- 750 ++ ++ ISY ++ E+FPS L+ + Sbjct: 582 ENGHTENRHRENGHRENVHNVHKEKGQMVISYSSFDTTEHKEKFPSSLLLQVYRQISGDS 641 Query: 751 ------LIDYIGQSHYLPGDEALNCDESEARVKAHLTCL----HTRMPFDPQNYQPGER- 799 L +Y+ + + A+ P + Sbjct: 642 DADYTTLQNYLMPPEGMIPKRQSEVMDEIDWWLANYVEYVENGQHLQLNHIVYCYPDLQK 701 Query: 800 --QSYAREWLPAASQAGKAHSEFVQPL-PFTLPETVPLETLQRFWAHPVRAFFQMRLQVN 856 +++ P + S + P + + L+ P F L + Sbjct: 702 GVEAFQNRLSPEFTVYDGNVSADRTAIDPRERAKPISPTRLELLGRCPYGYFLNQVLGIE 761 Query: 857 FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 + P L+ L+R + + + + + + E+ Sbjct: 762 PPEDIEFDPGK---WLDSLTRGSLLHTIFEQFYRELTLNQEKPQEHKHSEYLTEMAEELI 818 Query: 917 WETQCQ-----------EMQQLADRVIACRQPGQS------------------------- 940 + + E L + + + Q Sbjct: 819 DQQLEELPPPSDLVYQYEKDDLLNSALVFLRSEQEYFESSRPIYFELYFGRSGDEQEHQD 878 Query: 941 -MEIDLACN-GVQITGWLPQVQPDGLLRWRPSLLSV 974 + ++L + ++G + +V D + Sbjct: 879 MVPVELPSGKRLYLSGKIDRVDLDQDGNYLAYDYKT 914 >UniRef50_B3E665 UvrD/REP helicase n=1 Tax=Geobacter lovleyi SZ RepID=B3E665_GEOLS Length = 1048 Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats. Identities = 90/682 (13%), Positives = 165/682 (24%), Gaps = 115/682 (16%) Query: 302 SWGKLGRDYIYLLS-DLESSQELDAFVDVTPDNLL-------HNIQSDILELENRAVAGV 353 + +G D + S + + FV+ +L H IL+ + Sbjct: 299 NLFVVGDDDQSIFRFQGASVENIRRFVERYRPSLTTVTLTDNHRSSQLILDGAGALIGRN 358 Query: 354 NIEEFSRSDN---KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV 410 + L + E + +R+ A+L D + P I V Sbjct: 359 QERLSDEKQLIAMNPEVAALPEPPQLEGYATLAHETVAIANRIGALL--DAGVLPEQIAV 416 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS-ED 469 + + I R + R P++ +++L + Sbjct: 417 IYRNHSQSEEII-----RYLTARGVAVQTRRRADILQEPLILKLMNVLRYLATELERPHS 471 Query: 470 VLALLDVPVLAARFDITEEGLRYLR-QWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 LL + F + L L + + + L GQ Sbjct: 472 GERLLFEILHEPWFGVPPLALARLSVEIARQRTEKRPSYWREQLPLRGMDKGQQALFPAS 531 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 + L A E+ + + L LL + LAQ E + Sbjct: 532 DDLHLRQAGETIEELLRDAATM------------TLQELLHHVITRLGILAQALSAHERV 579 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL----AQR 644 + + + L L L Q Sbjct: 580 WHL----------------------ELLNTLFDFVREETAKQPLSLPELLAMLADMQRQG 617 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 + + VN T + + F V +LG GV+ + + Sbjct: 618 ISLAVEKLSYTGAGVNFLTAHGSKGLQFDHVFMLGCTRGVWDSASRNRTYSMPPTIWSGP 677 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 S ++ R LF A+ A+++L IS+ R ++ E S V EL + G S Sbjct: 678 AGSEEEESRRLFYVAMTRARKQLVISWPERDNKE-KELEKSRFVAELAESGGGSIRQHVL 736 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 V L D + Q Y+ Sbjct: 737 SDDELLAFGNAVLQALPARLPAELID-DAFVDSLLQKYS--------------------- 774 Query: 825 PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL 884 + + L + P+ +F L+V + L+ Sbjct: 775 -------LSVTHLNSYLRCPLSFYFNTLLRVPAP------------MSSALTFGSAVHHA 815 Query: 885 LNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEID 944 L L + A+ G P + ++ + R Sbjct: 816 LEQLFRKMKADPA-------GRFPTA-------DVFVEDFRWFMRR-HEEGFTPAEFRRR 860 Query: 945 LACNGVQITGWLPQVQPDGLLR 966 L + G+ Sbjct: 861 LEYGETILPGFYAAHHAGWKRD 882 >UniRef50_O31626 Putative ATP-dependent DNA helicase yjcD n=3 Tax=Bacillus RepID=YJCD_BACSU Length = 759 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 50/447 (11%), Positives = 125/447 (27%), Gaps = 78/447 (17%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITF- 376 + + F P + ++ + + + +++ + L+ I Sbjct: 386 SNPSFILDFQKDYPGAKTIYLTANYRSTHPIVSSADIVVKKNKNRYAKTLEAARDDIQVP 445 Query: 377 --HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + + E ++ + ++ +P D V+ + Sbjct: 446 VLFYPYDEEEEATMVVSDIKEKIQN--GASPEDFAVLYRTNSGGRAIYER-----LHQSS 498 Query: 435 LPYAISDR-RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY ++ S ++ ++ L + +E + LL Sbjct: 499 IPYTADRGVQSFYSRRIVRQILAYLYASQNEDDTEAIKHLL------------------- 539 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 L L + +T + ++ +++ + Sbjct: 540 ------------------PALFLKQSALNTLKA--------LSITEDCTMIKALAKLPDL 573 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 + + + L +P+E + F + +E Sbjct: 574 KPFQLDKIKKIVPFFASLRTM-------KPVEAI--TFAEGKMGFSEYLKKRGNEGNKLE 624 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + + + A+ +P + E+ V + T+ + + FK Sbjct: 625 KGSDDLRDIKVVAKKFKTIP--DFLAHVDHMRAAEKNRT--DEHGVQLMTIHRSKGLEFK 680 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 V +LG DG P D + ++GD + +++R L A+ A+Q LY+S Sbjct: 681 TVYVLGTVDGSIPH-------DFSLETARKGDEAALEEERRLLYVAMTRAKQHLYLSCPA 733 Query: 734 RSIQDNSERFPSVLVQELIDYIGQSHY 760 S + L+ Q + Sbjct: 734 NR--RGKTANRSRFLYPLLQKARQPLH 758 >UniRef50_C5MA33 Predicted protein n=3 Tax=Candida RepID=C5MA33_CANTT Length = 935 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 55/437 (12%), Positives = 124/437 (28%), Gaps = 41/437 (9%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 SDIL+ + ++ + + V +P + + + +L Sbjct: 325 SDILQYSESVMRQQKDRHQKNLRSQNDVSFKP---VYKVLDTPAEQARWIVYEIEQLLAL 381 Query: 400 -DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 + + DI ++ + R +PY + R+ + + + L Sbjct: 382 PNSPIKFEDIAILFRASSQ-----TKIVEDELRLRKIPYRLIQGRSFWERKEVVSTMDYL 436 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + VL ++ P + E+ + ++ + I+ G+ + L Sbjct: 437 KVCGDENDLFSVLRTINFPA----RSLGEKTAGPIIAFIEK-NIKNGLSVHDCLRLVANG 491 Query: 519 TGQHTWRFGLTRMLLGYA-MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 +L GY + E ++ L E + + + Sbjct: 492 KDGSKLSTRTRNILKGYVNIIDTAQERMKIMETCSGESLRHEAARLFQDIYDGSTLDKEF 551 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETE-----------AAMTLIEQQWQAIIAEGLGA 626 + EE ++ +F E I Sbjct: 552 RKNAKDYEERRMNVEELSKSFIEFVPREETLPPYNGEIDGEFTPDKRNFIMQYIESIGLF 611 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 + + +Q S +++ T+ + + + VV + G++DG+ P Sbjct: 612 DSSAVTESGENKGIENE--EQGENSVVPEFKGISLSTIHGSKGLEWPVVFVPGLSDGILP 669 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER---- 742 + A S+ +++R F A A+ LYIS + Sbjct: 670 ARFAVNSNGDPSKSA-----ESINEERRCFYVATTRAKTLLYISGYSSDSGYSYGSNYSR 724 Query: 743 ----FPSVLVQELIDYI 755 PS + ++ D I Sbjct: 725 TFHCPPSRFITDIGDNI 741 >UniRef50_A5I1P6 ATP-dependent DNA helicase n=14 Tax=Clostridium RepID=A5I1P6_CLOBH Length = 670 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 53/539 (9%), Positives = 151/539 (28%), Gaps = 95/539 (17%) Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASW 303 C + + KD L Q +E N + E + L + Sbjct: 161 CFNSYEEYKDKKELLDFDDLQINIFKLLKEDERILKGYNKLFKYILVDEFQDCDTLQINI 220 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNL--------------LHNIQSDILELENRA 349 ++ + L + + Q + +F P+ + L + + Sbjct: 221 LQMLSEGNSLFAVGDEDQCIYSFRGSKPECMVDFNHYFKKGEKIYLRYNYRSPKNIVGIS 280 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 + + + + D +I + + + E + + +++ +D+ Sbjct: 281 KNLIKNNKLRNNKRIEAYNDYDKNIVLKSFLNEREQAEEISKIINDIIK--KGYGYKDVA 338 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSRFVSE 468 ++ + +P+ + +H V ++ + + + + Sbjct: 339 ILYRTNMESRSL-----TDLFFKKRIPFRLLDKGYNFFNHFVCRDILAYMQVCIDSYDKK 393 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 L +++ P I++ + +R++ Sbjct: 394 SFLKIINKPF----RYISKLNVERVRRYKYAKN--------------------------- 422 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 + + + + + +L + ++N A + Sbjct: 423 --------------SFDILKEQKDIQPFQIKNLENLEKDINKMNKMSAQDAIGHIIHNLG 468 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 + + + + + I + + E + + + + Sbjct: 469 --YEEYIKEYSERIKIDKEELLQIVDELKEAAEEY--------TSILSFLVHVEEVEKEI 518 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 + V + T+ ++ + FK V ++ N+G P A + Sbjct: 519 NKKEI-NEDSVILSTIHGVKGMEFKNVVIVNCNEGNIPYSKADEEVN------------- 564 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE--LIDYIGQSHYLPGDE 765 +++R LF + A++ LY++ N E S ++E L + ++ Y G E Sbjct: 565 IEEERRLFYVGITRAKENLYLTVPKVIRGKNKEN--SNFIKECKLDKELLENDYFKGKE 621 >UniRef50_C6P8R0 ATP-dependent nuclease subunit B-like protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P8R0_CLOTS Length = 1053 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 87/709 (12%), Positives = 200/709 (28%), Gaps = 113/709 (15%) Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 + +DI E+ + + S L+ D SI S + EV + + Sbjct: 252 VNNDIYEMIEVNHDVKKVATYIYSGE-TVLNGEDLSIKIMNSPSIEHEVRETARLIKRKI 310 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 D + P I V + +ID Y I +F + +P I+ + P+ +L Sbjct: 311 VFDK-INPDRIAVFIKNIDDYRTQIIDIF----DEMNIPVKINRGIKLSTMPITNDIYNL 365 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 +S + E + ++ L ++I++ + SGI D + E Sbjct: 366 ISYKLNH-DYESFVNIMTSKFLVP-YEISKRSREIIDLL---SGIDRDKD-NFEDEFVTA 419 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 + + + + + E + + + Sbjct: 420 MKDDKSLNATFEFL---------KRYVDVFINFREVPYKDTK------EFVESVLKVIDL 464 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 L + ++ + + F A+ I+Q + + Sbjct: 465 LEIDFNIKALFDMGIIRSSDFIS----NVKALETIKQILNKELEIKKQYGEPSIDDIENF 520 Query: 638 RDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 ++++ L +S R L V I + R + VV +LG+N+GV P + Sbjct: 521 QNDILDMLSNFDVSIRNLDFEGVRIISPDLARGQMYDVVFILGVNEGVLPSTKSINPIFD 580 Query: 697 MSQKPKRGD--------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 +S + + + ++ F + SA +++Y+SY D S + Sbjct: 581 LSDEEYLEKHGIYMLSRKWEFEREKVRFNACIASALKEVYVSYRTTDE-DGCNMIKSPFI 639 Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE--RQSYAREW 806 +L + ++S+ R+ A + + R F+ E +W Sbjct: 640 DDLQNLFD-------------EKSKERLIAPIVYMKDRFAFECDAASKDEALLFMIDSKW 686 Query: 807 LPAASQAGKAHSEFVQ---------------------------------------PLPFT 827 A +S ++ L Sbjct: 687 NKRQGDANTIYSNILENDLYLTKSYSYINFSASIEKKRRANCEVDNHMGIISKDANLKEL 746 Query: 828 LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED-SEIPDTEPFILEGLSRY---QI-NQ 882 + +L + P + F + L ++ E E L +Y + Sbjct: 747 SDIHLSASSLNSYVVCPFKFFIETLLNLHVSDEFIESKKSIGSLYHEVLMKYYKDNLDLY 806 Query: 883 QLLNALVEQDDAERLFRRFRAAGDLPYGAFGE----IFWETQCQEMQQLADRVIACRQPG 938 + + + E + D+ + + + ++ ++ Sbjct: 807 DVNEDRLGEIIDESFEKITGIENDIIFDKIKQEFYNVVFQLVKDDISNRLYYYNKTGAEL 866 Query: 939 QS------MEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW 981 E+ G G + ++ + + + + + Sbjct: 867 IPSIFEKKFEMKDHYGGNIFHGKIDRIDLERNID---GKFTGKYVIYDY 912 >UniRef50_Q0EW02 DNA helicase II n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EW02_9PROT Length = 699 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 61/476 (12%), Positives = 133/476 (27%), Gaps = 86/476 (18%) Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD------ILELENRAVAGV 353 + +G G D ++L F + H ++ + IL+L N ++ Sbjct: 244 QSIYGWRGADIRHILE----------FERIWSGAGTHRLEENYRSTGAILDLANAVISKN 293 Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA 413 + L + VC+ E + +L A D +++ V+ Sbjct: 294 EDRHDKSLRATQEQGLLP---QWQVCNDEYDEARQIGTQLQAW--RDAGYAWQEMAVLYR 348 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 ++ LPY I ++ ++ +L + + ++ + Sbjct: 349 SNRQ-----SLALEQILREQGLPYRIVGGVGFFERLEIKDALAYWALLNGCGDALQLMRI 403 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 + P + I +G L ++ SG+R Sbjct: 404 CNRP----KRGIGLKGQEQLAAQLSGSGLR------------------------------ 429 Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD 593 EW ++ G+ +L LA L+ L L + Sbjct: 430 -------AHEWLDLVAEGGVGGVAGKLA-PLARLIASLRPQAGTLPDRGLMALLQE--SG 479 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 L++ A+ + + P+ + + +E Sbjct: 480 YLDSLQAMGELEAASR---IDNIHTLQRYIELTMEQEITPIEFMDRAALLQSGEEAGRDD 536 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 V + +L + + F V L G+ +G+ P Q A + ++R Sbjct: 537 ENEESVTLMSLHRAKGLEFDCVVLPGVEEGLLPHQRALDDG-----------EAGIAEER 585 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEAL 767 L + A++ L ++ PS ++ L + Q + Sbjct: 586 RLLYVGITRARRHLKLTTARVRRLFGETHYPLPSRFIKNLPPSMLQQDTPVATASA 641 >UniRef50_Q6KHF5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mobile RepID=Q6KHF5_MYCMO Length = 723 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 63/517 (12%), Positives = 156/517 (30%), Gaps = 78/517 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 P K R + ++ + E L + VG+P + G + + Sbjct: 207 PEIKLKWSRRFKYILVDEFQDTSPIQYEIIKTLAQNHNLTIVGDPDQTIYSWRGANVNLI 266 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS---DNKRPLDPL 370 L F + N+ + E ++ F++ + Sbjct: 267 LD----------FHKDFENAKTINLNLNYRSTEKILKHANSLIHFNKKRLEKDLVAYTKQ 316 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 + FH SP+ E + D++ L +I ++ + F F A Sbjct: 317 GQEVIFHHALSPELEARWVVDKI-KWLISIEKAKLSEISIIYR-----ANFYSKNFEDAL 370 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 + + + ++ +S + L S +L++P Sbjct: 371 LRESIHHQVHGGEKFYERSEIKNALSYIKLLVSD-SDLAFQRILNIP------------- 416 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 Q + +L Y ES +Q++ + Sbjct: 417 ------------------------------QRSIGNIYRNKILDYCDESNLSIFQAINNH 446 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 E + + + L L+ ++N +++ + + D+ +L + +T Sbjct: 447 LEDLPVSSNIREKLFDLIFKINKYQKIINENNVQVSVDEFFADIKYYDYLANEDTFKNGK 506 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 + ++ + +D + SQ V++ + + + Sbjct: 507 --VDNVKELLIIISNWFRNNPK--KTFQDYFEEISLVPNASQEDDKNTVSLMNIHNCKGL 562 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 F V L+G+++ + P + A D S +++R L A+ A++ L+++ Sbjct: 563 EFSYVFLVGLSEEILPSKKALENDF---------DDSNLEEERRLAYVAITRAKKMLFLT 613 Query: 731 YIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDE 765 + N +++ S + E+ + + ++ Sbjct: 614 DSDGYLFGNFKTQKKTSRFIGEMGIVLENENQKTMEQ 650 >UniRef50_A8M3F7 UvrD/REP helicase n=5 Tax=Actinomycetales RepID=A8M3F7_SALAI Length = 1162 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 90/754 (11%), Positives = 169/754 (22%), Gaps = 150/754 (19%) Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL------ 403 + ++ P ++ + + E E + D LL + Sbjct: 387 ELHAALSVKEPIPHRTPRGSAAGTVHCALLDTYADEAEWIADSLLRAWQGAAGAPGAVPE 446 Query: 404 ------TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 P V+V I A+ SA R LP + P + + Sbjct: 447 HLPVAARPT-TAVLVR----LRSQIPAI-ESALRARGLPVDVVGLGGLLDTPEVRDVVCT 500 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L + +L LL AR+ I L L + +P Sbjct: 501 LRVLADPTDGAALLRLL----TGARWRIGPRDLVALHRRARAIAAARRKLTAGDEPEIVP 556 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 +++ + AE + +L + R Sbjct: 557 D------------------ALDEATLVEALADLGPAPAYSAEGYARFRAAAQELGLLRYR 598 Query: 578 LAQ--ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA-VPL 634 L Q + + + + L A+ L Sbjct: 599 LDQSLPDLIADVERTIGLDVEVAVRAGRDGAGDAGLARGHLDALGDVAARFSGETPGATL 658 Query: 635 SLLRDELAQRLDQER----ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 S LA D+ER + G V + T + + + VV + G++ GV+P + Sbjct: 659 SAFLAYLAAAEDEERGLAPGEVEVVEGAVQVLTAHAAKGLEWDVVAVAGLSRGVWPGPVR 718 Query: 691 PLGFDL----------------------------------MSQKPKRGDRSRRDDDRYLF 716 L ++ ++R L Sbjct: 719 NSDHWLGGLGVLPFPLRGDADGLPVLELAEAGEQRGVAQALADFTAAWRAHDEREERRLA 778 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL-----------------IDYIGQSH 759 A+ ++ L S R PS L++++ + + Sbjct: 779 YVAVTRPRRLLLCSGYWWGEGTKRARGPSALLRDVHGACLDAGAGLVVDEWAAEPAPDAV 838 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR--------------- 804 + L + + L + G+ + A Sbjct: 839 NPTTEVVLRAEWPADPLGDRRPALAEAATLVRRFLTDGDPTTRAATGAVATAAPGDDDAE 898 Query: 805 -------EWLPAAS---QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQ 854 W A + P+ LP + + L P L+ Sbjct: 899 DDDPEVVRWRREADLLLAERAELTRHAGPVEVALPAALSVTQLVALRRDPAA--LARSLR 956 Query: 855 VNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE 914 TE + R L + AA Sbjct: 957 RPLPTEPNPYA----------RRGTAFHAWLEQRFGAGRLLDVDELPGAADADAAPDEAL 1006 Query: 915 IFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSV 974 + + L + GV + G + V R+ Sbjct: 1007 AELQE-----RFLHSEWADRTPVEAEVPFATVIAGVVVRGRMDAVFGRPGGRFDVVDWKT 1061 Query: 975 AQ----------GMQLWLEHLVYCASGGNGESRL 998 + +QL + L + G R+ Sbjct: 1062 GRQPAGPAAAAAAVQLAVYRLAWAELAGVPVERV 1095 >UniRef50_A3EU22 Putative ATP-dependent DNA helicase, UvrD/REP family n=2 Tax=Leptospirillum sp. Group II RepID=A3EU22_9BACT Length = 746 Score = 163 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 50/482 (10%), Positives = 120/482 (24%), Gaps = 64/482 (13%) Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSI 374 +++ +L + A + ++ + + Sbjct: 254 AEVGHILSFPKEYPGARQVVLTVNYRSTRPIVTAASSMISSALARYRKDMVSTGRPGEPV 313 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 S E + + +E RD +V+ PFI A A+ Sbjct: 314 FLKKLDSEWAEARFVARTIQEKVER--GAMFRDQVVLFRMNVQAQPFI-----RAFAEAG 366 Query: 435 LPYAISDR-RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P+ + + + ++ L + + F + +L+VP + E+ L Sbjct: 367 IPFQTRGAVQGFFNRREIRDLLAYLRVSANPFDRISLGRILNVPP----RGMGEKARERL 422 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 Q G+ + + + F + G + Sbjct: 423 DQQAGNPGLSSWELLERLSLELSGKARESARAFANDLEEASRRVRRGDGPFS-------- 474 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 + E+W+ E + + Sbjct: 475 --------------------LLQFWLSRTGYEQWVSEGES-----GEEGPGREENLKELL 509 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + + D P + +EL ++ V++ T+ + + F Sbjct: 510 RMSERFGDGIGEL--TDRTPTGVFLEEL-ALSQEDPGEAGESPDRVSLLTIHQAKGLEFP 566 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 V L G + + P + D+ +++R LF A+ A+ L I++ Sbjct: 567 HVYLAGAEEDILPMKSR--------------DKVDVEEERRLFYVAMTRARDSLAITWCL 612 Query: 734 RSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 PS ++++ Q + + + Sbjct: 613 TRQLFGRTESPRPSRFLRDIPPEAVQGDRPVFRPETPVSRQTSELPPRKVFPPPSLAPSR 672 Query: 792 QN 793 Sbjct: 673 PA 674 >UniRef50_D2SFF2 UvrD/REP helicase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SFF2_9ACTO Length = 1062 Score = 163 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 91/655 (13%), Positives = 177/655 (27%), Gaps = 65/655 (9%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 R VA + + + HV S E + D L D + Sbjct: 339 RRVAEALPGPWEHRRLAAVEGAEEGAAEVHVFGSASVEAAYVADTLRRAHLVD-GVPWSG 397 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSRFV 466 + V+V + P A +P + +D + P + ++ L R Sbjct: 398 MAVVVRTALAIGPL-----RRALTSAGVPVEVGTDDLPLAAQPAVAPLLAALGALLPRPG 452 Query: 467 SEDVLALLDVP-----VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 +E LD P + +A T LR LR+ V + R G+D D A Sbjct: 453 AEPGTLALDEPGAEALLTSALGGATVLDLRRLRRAVRIAQARRGVDADERGAPLATALTD 512 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 L + A A + ++ + Sbjct: 513 EGLLEELPDAVARPARRVADVLAAGRVALARDGSAE--------------DVLWAMWQRS 558 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG-AQYGDAVPLSLLRDE 640 W A + D + A+ G + + + Sbjct: 559 GLAGRWARASAAGGAAGAVADRD--------LDAVVALFDAAAGFVDRLPSATVGAFVEH 610 Query: 641 LAQR--LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 L+ + + V + T + + + VVC+ G+ +G++P Sbjct: 611 LSAQELPGVGGAGRESATDAVRLLTAHASKGLEWDVVCVAGVQEGIWPDLRDRGTLLGTE 670 Query: 699 QKPKRGDR----------SRRDDDRYLFLEALISAQQKLYISYI-GRSIQDNSERFPSVL 747 +R ++R LF A A+++L ++ + G ++ S Sbjct: 671 VLVERVAGIDGAVLDRRVQMLAEERRLFYVACTRARRRLVVTAVEGALDGPDAGATASRF 730 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 + L+ + + + ++ + A E + Sbjct: 731 LD-LVVPPPDDGRPLTPLPRSLTLPALVAELRRAVSDPQTEPARRSAAAAVLRRLADEGV 789 Query: 808 PAASQAG----KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE 863 P AS A S+ +P V ++ F P++ L Sbjct: 790 PGASPADWWGLAPLSDDAPLVPDGEAVRVRPSAIETFQRCPLKW----VLGA---VGAEA 842 Query: 864 IPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQE 923 PD + + + QQ+ L L DL G + Sbjct: 843 SPDATRTVGSA--VHAVAQQVAEGLPAAGAPAALAEEL-DQLDLGPGWADQRQRIAARDM 899 Query: 924 MQQLADRVIACRQPG--QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 + + A + + D+ +I G + +++ DG R L + Sbjct: 900 LDRFLRWHAANGRELLAAEADFDVTVGRARIRGQVDRLERDGAGRLVVIDLKTGR 954 >UniRef50_C4Y181 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y181_CLAL4 Length = 924 Score = 163 bits (411), Expect = 5e-38, Method: Composition-based stats. Identities = 68/442 (15%), Positives = 134/442 (30%), Gaps = 53/442 (11%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVC-HSPQREVEVLHDRLLAMLE 398 + IL L R + E + L + C S +E + + + Sbjct: 372 AAILALSERVMRQQMGREEKTLRAQHTASILPG----YACLDSAAQEARWIAHHISHL-G 426 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 + D V+V + + A +PY I RA + A + L Sbjct: 427 QYEIFDRADFAVLVRT-----AYQTRAIETEFARAKIPYTIVKGRAFWERRDVVAVVDYL 481 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 S + + L+VP R + + L Q ++E + Sbjct: 482 RAVASDYDRLALFRALNVP----RRGFGPKSVAELVQ-LHEKHKCSAFETLKQVASGAIQ 536 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + + + ++ + D +G + + + + L Sbjct: 537 SSLGQKAQAQLTGFVNFVEKARSCLSECYEAND---------LGRFFNYVYVQSGLEKEL 587 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI------------IAEGLGA 626 + E + R L F D E M IE + + + I++ A Sbjct: 588 EPDS--EGNISEVRSQLAQFVSEDEEVSGQMGEIETEKEELRIRVDTGDKNISISKIKKA 645 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 + V LR L + S + + V+I T+ + + + VV + G+++G+ P Sbjct: 646 ESNLDVGREHLRQFLESLSLFDTDSSQESSQKVSISTIHGAKGLEWPVVFVPGLSEGLLP 705 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG--RSIQDNSE--R 742 A +++R F A A+ L++S Q + Sbjct: 706 ASFAVDD----------SKPETINEERRCFYVAASRAKVLLFLSAYTEDSDGQWGRKPIE 755 Query: 743 FPSVLVQELIDYIGQSHYLPGD 764 PS +++L I P + Sbjct: 756 KPSRFLKDLEGLICSKLSWPQE 777 >UniRef50_A2RH76 ATP-dependent helicase/deoxyribonuclease subunit B n=5 Tax=Lactococcus lactis RepID=ADDB_LACLM Length = 1099 Score = 163 bits (411), Expect = 6e-38, Method: Composition-based stats. Identities = 90/752 (11%), Positives = 212/752 (28%), Gaps = 114/752 (15%) Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 IL+L++R V E D K + + E+E + + + + Sbjct: 270 RILDLDSRFVITDEKIELKAEDEKYF--------RIWEAENQKVEIERVAKEIRQKIIQ- 320 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 +D V+V D +Y ++ VF +P+ + + HP++ F SL ++ Sbjct: 321 -GAFFKDFTVLVGDPAAYEITLKEVFDLY----EIPFFYAQEESMSQHPLVIFFESLFAI 375 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 + + ++DV+ LL + ++ EE + Y +V + I E Sbjct: 376 KKNNYRTDDVVNLLKS-KVYTDANLDEEVIDYFEYYVQKYKISG--RKKFTEEFIESEFS 432 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 Q + LLG S P G + G + L Sbjct: 433 QIELVNEMREKLLG-----------SESPLQVFLGNNRKKTGK--KWVSDLQGLLENGNV 479 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 + + + + + Q + + E L + + D Sbjct: 480 MTNMNAYFSAAE------LQNEHQMADKHEQVWQMLISTLNEFLAVFSDEKLKSVEFLDI 533 Query: 641 LAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 L L + Q VN+ + K + +G++ +PR + Sbjct: 534 LLAGLKNAKYRQIPANVDVVNVKDYELVEPKTNKYIYAIGLSQTNFPRIKKNSTLLSDEE 593 Query: 700 KPKR---GDRSRRDDDRYLF---------LEALISAQQKLYISYIGRSIQDNSERFP--S 745 + + D ++ + + L + SA++ L +S + E P Sbjct: 594 RLEINQTTDENQFIEQLNVANYQKNQFTVLSLINSAKESLVLSMPQIMANEQGEFSPVFQ 653 Query: 746 VLVQE----LIDYIGQSHYLPGDEALNCDES--------EARVKAHLTCLHTRMPFDPQN 793 + +++ ++ I + E + S E + + F Sbjct: 654 LFLKDADEKILQKIQGVNLFESLEHIGNSRSVIAMIGQIERELVESEETSEDKRVFWSSI 713 Query: 794 YQPGERQSYA-REWLPAASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQ 850 ++ + + ++ L ++ + L + + + + +RF+ + F + Sbjct: 714 FRILVKSNADFQKILLDLAKDIDTVNLAPDTLEQIYGDKIYASVSSFERFYNCEYQYFLE 773 Query: 851 MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDA--------------ER 896 L + E + ++ ++++ D E Sbjct: 774 NTLSL---------ETFENIDINSKIVGNFFHEVFEKVMKETDLSAENFDEKLTLVLQEV 824 Query: 897 LFRRFRAAGDLPYGAFGEIFWETQCQE----------MQQLADRVIACRQPGQSMEI-DL 945 R F E ++ +L + E+ + Sbjct: 825 DKNYSRYFTQDATARFTWSNLEEIVRQTATVLKATVSTDELKTLLTESSFGLPKSELGNF 884 Query: 946 ACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGE 1005 + + + + G + ++ + + Y + L + K Sbjct: 885 SVDDIYLRGRIDRLDQLSTDYLGAIDYKSS--AHSFKLQEAYDGLSLQFMTYLDVIK--- 939 Query: 1006 WRFPPLAAEQALHYLSQLIEGYREGMSAPLLV 1037 QA Y + + P+ + Sbjct: 940 ---------QAFPNQKIWGALYLQFKNQPINL 962 >UniRef50_A6RX56 Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A6RX56_BOTFB Length = 999 Score = 162 bits (409), Expect = 9e-38, Method: Composition-based stats. Identities = 50/536 (9%), Positives = 148/536 (27%), Gaps = 69/536 (12%) Query: 308 RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 ++Y +++ + + + IL + + + Sbjct: 258 KNYKRMITQYPDTVTISLEENYRSSG-------AILLTALNVIEQDSSRIAKSLLPTHVV 310 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLE-EDPTLTPRDIIVMVADIDSYSPFIQAVF 426 + Q+E + + + ++ L D +++ + + Sbjct: 311 GTRP---VLRKLATAQKEADWIIQEIQRIMGMTGDLLDLNDFAILIRSSA-----LSRII 362 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 S+ + Y + ++ + L + + ++ + +++ P I Sbjct: 363 ESSLGKAGIAYRMVGGLRFYDRIEIKTLLDYLRVINLPDHNDALARIINTP----SRRIG 418 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 E ++ L + +S + + ++ ++ + + R L + Sbjct: 419 EVTIKALLEEAEQS--KLTLWSLILKSVQGRRATKTKLTASVERNLSVFV----DIILTG 472 Query: 547 VLPYDESSGLIAELVGHLASLLMQ--LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 + + S +V + ++ + W + +W D + + Sbjct: 473 MKKVADPSNTENSIVKIMEFIIEKTSYETWLEEHRGDITKAQW-----DNVKELMTQATD 527 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF-LAGPVNICT 663 + ++ + +++ Q + LS +A + + + V I T Sbjct: 528 FQELISNGYED-ESLPQIDGLKQEDASDSLSRFLANVALASEVTKEEDKTNNTPQVTIST 586 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISA 723 + + + + +V + G G P A D++R L A+ A Sbjct: 587 IHAAKGLEWPIVFIPGAYQGSIPHSRAEDT----------------DEERRLLYVAMTRA 630 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQE--LIDY---------------IGQSHYLPGDEA 766 + L +S ++ + L + + Q P Sbjct: 631 KALLNMSCPLKNSLQ-ELTTTCPFLSARGLRAHLDYKGPSLRSNTVQCLAQILRRPFPSR 689 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQ 822 + ES A ++ + P + + + S + K + Sbjct: 690 ESIAESSACLERIEDTYYPLEPENDKEDESKWIVSNGNPNFTMGQRPAKRRRADIA 745 >UniRef50_C7MBM6 DNA/RNA helicase, superfamily I n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MBM6_BRAFD Length = 1094 Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats. Identities = 89/779 (11%), Positives = 188/779 (24%), Gaps = 111/779 (14%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 VG+P A +G G L + + V + +L NR + + Sbjct: 321 VGDPQQAIYGWRGASAASLAGFATAFAAPEQPVLQRTLSTSWRNDEAVLAAANRLASPLR 380 Query: 355 IEEFSRSDN--KRPLDPLDSSITFHVCHSPQREVEVLHDRLL-AMLEEDPTLTPRDIIVM 411 E + + + + + E + +L E++ P V+ Sbjct: 381 SAETGVTIPELQPRPGAGEGACEILEAADERAEALAIGRWILERRAEQEEDAPPASAAVL 440 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 V + L A+ P + ++L + ++ Sbjct: 441 VRARRQIPALV-----DGLERSGLAVAVVGLGGLLHRPEVADVRAVLECAHDPGRGDALM 495 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 LL P R + L L +W + G R D + + + + Sbjct: 496 RLLTGP----RLRLGARDLAVLGRWRDRLGARLRRDGET--PGGQDEAESVSLVDAVDDL 549 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 + + SG E + + +L ++ + + Sbjct: 550 PPEDWTDPSGR---------GLSGTGRERLLQVQQILREMRRLLPLPLPDLVTAATRLLD 600 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 D+ PD+ A + A G + L + ++ L Sbjct: 601 VDLALLESEPDSRALADLEAFRDHAAAFDRTARRGGLGAYLDLLEISEDEEAGLAVTAAP 660 Query: 652 QR-FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL--------------------- 689 + V I T+ + + + +V + G+ +G P Sbjct: 661 EAAHDPAAVTIVTMHSAKGLEWDLVAVAGLTEGTVPSYDLRRAKTDEAGRVRVPADGWLG 720 Query: 690 ----------------------------APLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 L+ + +DR L A+ Sbjct: 721 TLANAAVPTALRGDADTLPELAWAEADTQVDAESLIQEFRFAQGEESLREDRRLMYVAVT 780 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 A+++L ++ +S R S + E+ D + +S + R +A Sbjct: 781 RARRRLLLTSAAWRTGLSSARPRSRYLTEVTDLVPESFRTVQEVPETNPLESERPQAQWP 840 Query: 782 CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE-------FVQPLPFTLPETVPL 834 + ++ PA + + P P + Sbjct: 841 PRPGEPEQARARAAALLAEVAGQDDAPADPELAELVRRAVVDLEQQAAPPMVHSPPRLSA 900 Query: 835 ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDA 894 + + P A L+ R + R L + + Sbjct: 901 SQVVQQARSPQAAALD-LLRPLPRRPSAAAA-----------RGTAFHAWLESRYDSATL 948 Query: 895 ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITG 954 L E + A + + + G Sbjct: 949 LDLEDVLDLEDT--PADEAETDHRALREAFT--ASEWAERSPLVVEQPVHTRIGQIAVRG 1004 Query: 955 WLPQVQPDGL----------LRWRPSLLS-----VAQGMQLWLEHLVYCASGGNGESRL 998 + V D + W+ + + +QL L L + G +R+ Sbjct: 1005 VIDAVFADPEGTDGSEGVIVVDWKTGRVPRPAQLRERALQLSLYRLAWHERTGLPLARI 1063 >UniRef50_B7GLR0 Putative uncharacterized protein n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GLR0_ANOFW Length = 716 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 66/510 (12%), Positives = 152/510 (29%), Gaps = 86/510 (16%) Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGK-- 305 W D D Y + R + Q NS + + LLAS Sbjct: 275 WFDFDDMLYACYDMLRTDEKRLRQYHERFHYFLIDEFQDINSVQYETM--KLLASHTHHI 332 Query: 306 --LGRDYIYLLS-DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 +G D + + S + F P+ + + + I SR+ Sbjct: 333 CAVGDDDQAIYAFRGSDSSFIRQFQQDFPNTKIVKLTENYRSPHPIVSLANRIIAKSRTR 392 Query: 363 NKRPLDPLDSSIT---FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 + ++ S+ + + E ++ + +++ + P DI V+ S Sbjct: 393 IPKQMNAQTDSVHMPTLFFPYDEEEEATMIACDIEERMKQ--GVHPSDIAVLCRTNAS-- 448 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 +AVF + ++P +D + + ++ +S L + + + V L Sbjct: 449 --ARAVFER-LSQLHIPVT-TDGDSFYNRRIVRYILSFFQLAIDPNDEQAMTDVATVLFL 504 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + + L A+ Sbjct: 505 ---------------------------------------------KQAIMNDLKANAILQ 519 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 +++ D + + +A L ++ + + + Sbjct: 520 DCSLVEALAKLDGIPPFQKQKLRTIAPLFAKVKEM--------KPFDAIDFIEKEMG-LG 570 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 + IE+ + + + + + + + + A V Sbjct: 571 EFLKKRGNEGNAIEKGSDDVRD--VKVVARKFKTIQAFLSHVKRV---QAYANKTCADGV 625 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 + T+ + + F +V ++G DG+ P D + + GD + +++R L A Sbjct: 626 QLMTIHRSKGLEFPIVYIIGAVDGLLPH-------DYALEAYRNGDVAPLEEERRLLYVA 678 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 + A+Q+L+IS S++ + S L+ Sbjct: 679 ITRAKQRLFISVP--SMRRLKKANASRLLS 706 >UniRef50_Q600N7 ATP-dependent DNA helicase n=6 Tax=Mycoplasma RepID=Q600N7_MYCH2 Length = 769 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 76/523 (14%), Positives = 163/523 (31%), Gaps = 87/523 (16%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSE-NAGQLFNSDGEQDVGNPLLASWGKLGRD- 309 K P ++ + ++ + + + VG+P + G D Sbjct: 231 KSPEIRSRWQRKFDFVLVDEFQDTSLVQYLILKIFIKDKTRLVVVGDPDQTIYSWRGADP 290 Query: 310 --YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 + L D Q + + +IL+ N IE K+ + Sbjct: 291 SLILNLEQDFPDLQTVILDKNYRST-------QNILDAAN-----NLIENNQNRIKKKLV 338 Query: 368 DPLDSSITFH--VCHSPQ-REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 I H + + EVE ++ ++ ++ ++ +T RDI ++ + Y I+ Sbjct: 339 ASSKEKIEIHFEDLANERGAEVEWIYRKIQELITKNK-VTYRDIAILARS-NFYFKQIET 396 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 F +PY + + + L + D+ +++VP Sbjct: 397 KF----DGHNIPYFRHGASPLVTKKEIREALYFLKVIDN-SDPYAFEQIINVPP----KK 447 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 I + L + + G + Y+ + Sbjct: 448 IGIATINKLNELAAQFG-----------------------LNLHDFLFKYYSGKINFKGK 484 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP-----LEEWLPVCRDMLNAFF 599 Q +P + L + L + ++ + +++P + L ++ F Sbjct: 485 QGKIPLGHDNQLK---IKVLLERISAAKRFKSQIEEKKPCIFQFYSQVLDSFLKKIDYFD 541 Query: 600 L-PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 DA+ + + +++ I+ A + D Q Sbjct: 542 AIKDAKQASDTRNLLEKYYKIMDNWQKANPEKKLS--DYLDY----AAISHFEQTESQNK 595 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 +N+ T+ + + F+ V L+GMN GV+P Q + S +++R L Sbjct: 596 INLLTVHSSKGLEFEYVFLVGMNQGVFPAQKVLD----------QNSTSEYEEERRLAFV 645 Query: 719 ALISAQQKLYIS--YIGRSIQDNSERF-------PSVLVQELI 752 A+ A++ LYI+ Y S + S V+E+ Sbjct: 646 AVTRAKRVLYITNGYRAPSFARGLPQKFKTNQNIVSAFVKEMK 688 >UniRef50_A7HBX8 UvrD/REP helicase n=7 Tax=Cystobacterineae RepID=A7HBX8_ANADF Length = 745 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 64/514 (12%), Positives = 137/514 (26%), Gaps = 84/514 (16%) Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD---VGNPLLASWG 304 W + + R E + + ++ VG+ + + Sbjct: 228 WKILLAEREAVRRAVAGRYRHVLVDEYQDTNRLQGDVVDLVAGEHRNLCVVGDDAQSIYA 287 Query: 305 KLGRDYIYLLS---DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 G + +L ++ D V+ IL L N ++A + Sbjct: 288 FRGAHFANILEFEKRYPDARRYDLTVNYRST-------PQILGLANASIAANVRQFEKEL 340 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 + RP L + C Q++ + R+L + D + +I V+ + Sbjct: 341 TSVRPDGTLPA---VVPCREVQQQAAFVAQRVLEL--RDEGIPLPEIAVLYR-----AHH 390 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 A R +P+ + ++ ++ L + + L + Sbjct: 391 HAMEIQFELARRGIPFVVRSGVRFFEAAHVKDVLAHLRFVRNPGDELALKRCLKITP--- 447 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 + + R Sbjct: 448 --GVGTATAEGVWNAFLARRQRG------------------------------------A 469 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 G +L D +S + + L L R E P E V + Sbjct: 470 GTVDELLAPDVASHVPPKGRAGYRKLAELLRALSRKPTAELPGEAIEKVIEGGYEDYLRA 529 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 + + +Q Y D L + + + + Sbjct: 530 EFLNADSRVEDLRQLAEYAR-----GYEDTETFLAEISLLTELTAETVSEGGDPDEKMVL 584 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 ++ + + ++ V ++ ++DG +P A DR +++R LF A Sbjct: 585 SSVHQAKGLEWRAVFVVWLSDGRFPSAQA------------LKDRDGEEEERRLFYVACT 632 Query: 722 SAQQKLYISYI---GRSIQDNSERFPSVLVQELI 752 A+ +LY++Y ++ S V+EL Sbjct: 633 RAKDELYLTYPILAAPRDRERVVMKASRFVEELP 666 >UniRef50_Q2FUG2 ATP-dependent nuclease subunit B-like n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FUG2_METHJ Length = 1140 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 82/600 (13%), Positives = 171/600 (28%), Gaps = 76/600 (12%) Query: 379 CHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 P E+ + ++ + + ++ DI + D S + A D +P Sbjct: 283 FSDPATEMREVIREIVRLH--EIGVSYEDIAIATPDFRSTRVYA----LEACTDSGIPVR 336 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 S QS P++ ++S+ L + ++++ ++ P R++ EE Sbjct: 337 PSQGSLLQSSPLIAYYLSIFDLIEKGMRYDELVRVIQSPYCRFRWE-PEEDADQKSGDQK 395 Query: 499 ESGIRWGIDDDNVRELELPATGQH-------TWRFGLTRMLL-------GYAMESAQGEW 544 +SG R + + W L +LL + QG Sbjct: 396 KSGKRDSRYKYLSYKNFDLLCRTYGLDGGHIDWEKRLPDVLLFSDDEGDEQPLPDGQGFV 455 Query: 545 QSVLP----YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 QS P Y L + + +++L + L +R + E + + +L Sbjct: 456 QSKKPVSRTYHPRRPLEKQEIADTIEGIIRLVGIIKRLRDKRTIREHIWHFKTILKEIGS 515 Query: 601 PDAETEAA--------------MTLIEQQWQAIIAE-----GLGAQYGDAVPLSLLRDEL 641 P A ++ + V + Sbjct: 516 PVPGLAHANSLNAWLTDEEYLDLSSFHTLLSELQDLSGTGVISYLNPAVPVTFIDFIGAV 575 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 L ++ + A V + + + + V L+ +N+G PR L F S+ Sbjct: 576 RHVLQEKSGNVSPDASGVILTGIREIAHQHYPYVFLVSLNEGHIPRLTTRLPFTNSSENS 635 Query: 702 KRGDR---SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID--YIG 756 + R ++Y F+ AL + LY+S+ +D SV + L + Sbjct: 636 RMDTRTLSDILRQEKYQFITALAAGTTHLYLSWYEH--KDERTVLSSVFIDYLKSSTLLP 693 Query: 757 QSHYLPGDEALN--CDESEARVKAHLTCLHTRMPFDPQNYQPGE---------------R 799 + + + + EA A + ++ R Sbjct: 694 EWGRGSDEGGYSGFPGDMEASYSAGVCIHNSEWERSRSYIPEDVLLSSLVQRISIERTYR 753 Query: 800 QSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRT 859 R + + F+ + L+ + P R + + L + Sbjct: 754 FRLNRSEYDGIIGDDQIIRSAL-HFQFSPAYSWSASMLETYAKCPFRFYLERVLHIRPLP 812 Query: 860 EDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET 919 + E + + +++ RL A D +I E Sbjct: 813 DIGSDIPPET-------KGNLIHVIMSRFKRTMHENRLLPIKEAGFDTALSLIRDIAEEE 865 >UniRef50_C5VUD6 UvrD/REP helicase n=1 Tax=Clostridium phage D-1873 RepID=C5VUD6_9VIRU Length = 597 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 55/437 (12%), Positives = 133/437 (30%), Gaps = 92/437 (21%) Query: 312 YLLSDLESSQELDAFVDVTPDNLL----HNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 + + Q + F P+ + + I+ L+ + NI + KR Sbjct: 221 NIFCVFDYRQAIYTFRGGNPEYCMNFKHEYPNAQIINLDTNYRSCANIVNNANKFIKRYY 280 Query: 368 DP------------LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 + +I + + E + + + ++E L DI ++ + Sbjct: 281 GDYEYYSDSNASLLQNGNIQIYNNEKQEDEAVKIVNEIEKKIKEGENL--EDIAILYR-L 337 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 +SYS I + R +PY I + + +E +S L L ++ V LL Sbjct: 338 NSYSIHI----ENELKRRDIPYYIDNNGSFFKRKEIECILSCLRLVENPHDDGAVDMLLR 393 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 + I +R+ +G+ + + Sbjct: 394 YRPYPFTY-IRNSTKENIRKLSAMNGLS---------------------------LFQSF 425 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM- 594 + ++ +W+ + +L +N +E+ L+ + + Sbjct: 426 TLVNSSKKWE---------------LNNLKEFENIINRLNLQYKKEQNLKMLVDNIIKLL 470 Query: 595 -LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 L + + + + + + G LS + + + Sbjct: 471 KLEDYIKNNYTNQEEIIDRLNSLNSFKSFIKGDN------LSNFITYIYSD-EDNNKKAK 523 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 V + ++ + + FK V ++G+ DG +P + ++ ++ Sbjct: 524 QKEDKVQMMSIHKSKGLEFKNVFIVGIEDGKFPNK-----------------KTNLIEEA 566 Query: 714 YLFLEALISAQQKLYIS 730 LF + ++ LY+S Sbjct: 567 RLFYVGVTRPKENLYLS 583 >UniRef50_D1YBS1 UvrD/REP helicase n=3 Tax=Propionibacterium acnes RepID=D1YBS1_PROAC Length = 1085 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 92/730 (12%), Positives = 193/730 (26%), Gaps = 58/730 (7%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE---------EFSRSDNKRPLD 368 ++ LD +D PD +H++ ++ ++ A ++ R Sbjct: 284 AVAERLDEVIDEFPDVSVHHLTTNYRNSQHIAEVVESLRTGMPVVPSSSRLRRHANHSTS 343 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 ++ S R V + L D + R + V+ V + Sbjct: 344 TEAGTVAALRAPSITRLVRKIAGTLRHARVAD-GVAWRSMAVVTRHGGEL-----DVIAT 397 Query: 429 APADRYLPY-AISDRRARQSHPVLEAFISLLSLPDSRFV-SEDVLALLDVPVLAARFDIT 486 A +P D A + ++ L + + ++ + + I Sbjct: 398 ILAAEGIPVLRSRDEHALSDIYAVTHILNALEMAVALASGAQPSARDVATLLSNPLAGID 457 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + L W + G+D D EL A T R A Sbjct: 458 RSVIHRLETWCR---LVRGVDVDWALLKELGADPTVTAAGKSERTDDASRSGDAITAELD 514 Query: 547 VL-PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC-------RDMLNAF 598 + L LA + ++ L E L + Sbjct: 515 TACEVYSVPPSLRALAQPLAVMTQRVQRAADLLRSGATCHEALWALWQGSSWASSLRRRA 574 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 D+ + + + + A L + + Q Sbjct: 575 VAGDSTANRDLDGLCSLFDMAESAQTMAGIAGGQRLIEVVRQ-EQIPADRARESDEDRDG 633 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYP------RQLAPLGFDLMSQKPKRGDRSRRDDD 712 V++ T ++ F VV + G+ +G +P + + G + Sbjct: 634 VSVVTAHRIKGREFDVVAVCGLEEGNWPAGNHTGSLVRADRWSPDGLVAAPGWSENLRAE 693 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 L L A A+ +L + S ++ PS LV L +I + +L Sbjct: 694 TRLLLVASSRARHQLLL-CSVDSAEEGK--RPSGLVAGLP-HIEDNADSLSFASLTELVG 749 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYA--REWLPAASQAGKAHSEFVQPLPFTLPE 830 E R + + Q R R +P A A + Sbjct: 750 ELRRVIADESESPGVRTEAQALLDDLRNEEHHGRRLVPQADPATWWRQGVPRQDDMDGEI 809 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL--EGLSRYQINQQLLNAL 888 + + P R F R + + + + E + ++ + + L L Sbjct: 810 ELSASHVGELLTCPRRWFMTRRAGASSGSAFRASIGSLVHRICAENMDQWSLPKALAE-L 868 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN 948 L ++ + +L ++ Q L +R + + I + Sbjct: 869 EAAWPEIELSAEWQRSAELADAKAAVQRFDGWLQ----LRNRQLIGTEVRVDGTITVPSG 924 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLSV----------AQGMQLWLEHLVYCASGGNGESRL 998 ++ G + +++ D + L + +Q+ + V + G Sbjct: 925 TARVRGSIDRLERDAEGAYYVVDLKTGTSQSDEIKQSHRLQIGVYQAVVASGGVEAIGPT 984 Query: 999 FLRKDGEWRF 1008 + Sbjct: 985 SVSGAELVHL 994 >UniRef50_A2F783 UvrD/REP helicase family protein n=1 Tax=Trichomonas vaginalis RepID=A2F783_TRIVA Length = 727 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 57/521 (10%), Positives = 152/521 (29%), Gaps = 33/521 (6%) Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLES 319 L+ + S + + ++ + + VG+P + + G + Sbjct: 224 LIDEFQDTSDINFAILKLILQQSMTRQPPNRRVTIVGDPHQSIYSFRG----------AN 273 Query: 320 SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS-RSDNKRPLDPLDSSITFHV 378 + F+++ PD + + E+ A +I +F + P + I F Sbjct: 274 PDNIKQFLEMFPDAGHVTLSKNYRSCESIVKASQSIIKFDGNETELISMIPGGNPIKFIS 333 Query: 379 CHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 E + + + M+ ++ RDI +M + + R +PY+ Sbjct: 334 ASDAYAEADSICTEIERMVYPGSSIQYRDICIMFRMKK-----VASELEMELFRRNIPYS 388 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 + + +S L + E+ L ++ + L Sbjct: 389 NKRGLSFFMRSEVREIVSYARLLLNFGSEENDTNQLLSSSFEMVLNVPDRQL-------R 441 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 + + ++ + + + ++ +Q + + I Sbjct: 442 ACIAPQVTSEASKNKVNVLKYLELLINSKIKSDFPKATIKKLAEFYQIIGKLNRQICQIN 501 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEW-LPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 + ++L + + + EE + A + L+ ++ + Sbjct: 502 TSLST-DTVLETIIEITKLCNLDENSEEKNSEDLDEFSEAVQDMINDRNETFQLLLEESK 560 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 L A G + + + E S + V + T+ M+ + V + Sbjct: 561 RFHIRLLAANEGTPLSSQKCLQKFIDSITLETTSSN-MKNAVTLSTIHQMKGLESPVCFI 619 Query: 678 LGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ 737 + N + P + + +++R + A+ A+QKL+++ Sbjct: 620 MRFNQSILPMADKDSDDSGLGDQSV-----SLNEERRILYVAMTRARQKLFLTCALS--V 672 Query: 738 DNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 S + E+ + D+ + ++ Sbjct: 673 RGKVMEISQFLPEIDQNYITRDIILTDDEKREVQKIMKLNE 713 >UniRef50_A7IDD4 UvrD/REP helicase n=3 Tax=Proteobacteria RepID=A7IDD4_XANP2 Length = 1143 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 86/664 (12%), Positives = 166/664 (25%), Gaps = 130/664 (19%) Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + E L + + E + RD V+ +A R Sbjct: 534 EICRFETLDDEAAGLAASIREL--EGAGVRLRDQAVLCRTNGRL-----NEIAAALEARG 586 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P I + + + LLSL F A++ V R+ ++ + + Sbjct: 587 IP--ILHLGSLFEREEVRDLLCLLSLAVDPFGD----AIVRVGA-MPRYGLSLQDAYCVS 639 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + + G + + + Sbjct: 640 RHLRSIG---------------------------------------KPALAGLAEASAAP 660 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT-LIE 613 GL + L L R + L +L D+ D+ T I Sbjct: 661 GLSTAGRAGVERLAADLAGLRANASAWDFLATYLLDRTDLAKQLSQADSLTAQMRAVAIW 720 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA----GPVNICTLMPMRS 669 Q + + +L ++ + Q A V + T+ + Sbjct: 721 QFLNFVREQVPVGGGLPIQRTLDRVRQLVLLAEERDLRQVPAAALHLDAVRLMTVHGSKG 780 Query: 670 IPFKVVCLLGMNDGVYPRQ------LAPLGFDLMSQKPKRGDRSRR---DDDRYLFLEAL 720 + F+ V + G+ +P P G + D ++R D++ LF AL Sbjct: 781 LEFEAVHIPGLTVASFPSSNRGQRCPPPRGMVEGAGDLSPADEAKRAHDDEEECLFFVAL 840 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 A+ L + Y R ++ S R S + + + P Sbjct: 841 SRARTHLRL-YHARKQRNGSGRSASPFLGWIPATLLDEISNP------------------ 881 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 P A + + + +V L + Sbjct: 882 ---------------------------PTLPLPAGASTSQPIAIAWPADWSVTDSRLGSY 914 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR 900 P R F+ L + + + + L Y + + L + + Sbjct: 915 EKCPRRFFYTHVLGLGGARKPTAFSR----THDCL--YDLLRWLADTRRTAEPTVADAES 968 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ-----PGQSMEIDLACNGVQITGW 955 G F + +L ++ Q + ID V + Sbjct: 969 AFEKIWGTRGPTDHAFAADYRRLASRLIGALVRSGAGRRFREAQPLAIDFPNGRVVVEPN 1028 Query: 956 LPQVQPDGLLRWRP-----SLLSVAQGMQLWLEHLVYCAS-GGNGESRLFLRKDGEWRFP 1009 PDG + R ++ L HL + GG + D Sbjct: 1029 ELAELPDGTVVIRRVRTGHKRSDEYDRLEYTLYHLAAESQFGGRAVVQALHLTDETAEAV 1088 Query: 1010 PLAA 1013 ++A Sbjct: 1089 AISA 1092 >UniRef50_B3DUG1 ATP-dependent DNA helicase UvrD/PcrA n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUG1_METI4 Length = 636 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 58/468 (12%), Positives = 141/468 (30%), Gaps = 98/468 (20%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 VG+ + + G + +L+ F P ++ NI+++ Sbjct: 250 VGDDAQSIYSWRGAEIENMLN----------FPKRYPSTVVINIKTNYRSTPEILALANA 299 Query: 355 IEEFSRSDNKRPLDPLDSSIT-----FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 E ++ + L S+ +C+S + +V+ + + + +++ Sbjct: 300 AIEGNQFQFPKELRAARKSLQEIKPQLLLCYSTAVQSQVIAEFIEDF--RKQGIEAKEMA 357 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 ++ + F R +P+ I+ ++ + L + + Sbjct: 358 ILYR-----AHFHALEMQLELTRRKIPFEITSGIRFFEQAHIKDICAFLRFFINPYDETA 412 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 ++ I + L L S ++ +L P + +W Sbjct: 413 FKRIVK-----MFNGIGPKTLSQLWAEYLAS-------SGSIEKLRPPKAAEKSWMS--- 457 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 W + S G + L +L + + L Sbjct: 458 --------------WLDIHKELSSPGYAHQPSKQLERILHGVY------------ADHLK 491 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 + + D E + + +A+ D V Sbjct: 492 MLYECYQRRL-EDIEELINFASLYNSTEDFLAQISLLTGVDTV----------------- 533 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 + G V + T+ + + +KVV ++ + +G++P + + Sbjct: 534 ---QEQRGGVRLSTIHQAKGLEWKVVFIIMLCEGLFPSNYS------------LNHPTLL 578 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYI 755 +++R LF A A+ +L++ Y R +N + PS ++EL ++ Sbjct: 579 EEERRLFYVAATRAKDRLFLCYPARRSFNNRQSTYFPSRFLEELPKHL 626 >UniRef50_C1XZD7 DNA/RNA helicase, superfamily I n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XZD7_9DEIN Length = 646 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 59/487 (12%), Positives = 148/487 (30%), Gaps = 80/487 (16%) Query: 295 VGNPLLASWGKLGRDYIYLLS---DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 VG+P + +G G +Y +L + + + + + + I+ Sbjct: 235 VGDPDRSIYGWRGANYRTILEFRQHYPGAAVYGLYTNYRSQAGVVEVANRIIAQNATRKP 294 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + +S+ V + E + + + ++ V+ Sbjct: 295 EMQEAHLPQSEEPF----------LLVAKNRWEEAHFVAQAVE--FYRGQGIALEEMAVL 342 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 + + F+ A R +PY + R+ ++ +++L + + S V Sbjct: 343 MR-----ANFLSRDLEQALRLRGIPYQFTGGRSFFERREIQLGMAVLKVLANPKDSLAVA 397 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 AL++ G++ + + + + + Sbjct: 398 ALVE----EMVEGAGPLGIQKVLEAAKAANL--------------------SPLEAFRNP 433 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 + + + + +++ + +A L L L E WL Sbjct: 434 AMVKGLRGKEVQAEAMRLAEVLQDQVARLAAEAPEYHALLKETLDRLG----FEAWLDRL 489 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 + ++E + + + E G + +D + L + + Sbjct: 490 GE--------ESEQVYSRKANLDRLLQGMQEWQEVNPGAPL-----QDLVGTLLLEAGDT 536 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 V++ T+ + + F+VV ++G+N+G++P A F ++ Sbjct: 537 PAEEGQGVHLMTVHASKGMEFRVVFVIGLNEGLFPLSKASSSF------------EGLEE 584 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 +R L A+ A++ L++SY D S QE + + G + Sbjct: 585 ERRLMYVAVTRAKEVLHLSYAA----DG---VVSRFAQEARVPVEEYDPRLGWSGRQNQQ 637 Query: 772 SEARVKA 778 + + Sbjct: 638 ALKALLE 644 >UniRef50_B9WE90 ATP-dependent DNA helicase, putative n=1 Tax=Candida dubliniensis CD36 RepID=B9WE90_CANDC Length = 859 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 57/490 (11%), Positives = 145/490 (29%), Gaps = 73/490 (14%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSIT-FHVC-HSPQREVEVLHDRLLAMLEE-DPTLT 404 ++ + + K LD SI + C S Q E + + ++ +L + + Sbjct: 328 LNISETLMNQQKGRTPKLLKSQLDFSIKPVYSCLKSAQEEAKWIVYQISHLLSLPNSAVQ 387 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 +DI V+ + + + LPY + RA + A + L + Sbjct: 388 GKDIAVLYR-----AAYQSRALEDELVKKGLPYKMIRGRAFWDRQEVIAIMDYLKVCSDE 442 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 V+ L+ P + + + + L + + + A + Sbjct: 443 NEQAAVIRTLNYP----KRGLGPKTVESLGKIIEK-----------------QANQGKSV 481 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL----MQLNIWRRGLAQ 580 L M + + + +E ++ ++ L + ++ + L Sbjct: 482 HQCLLAMTKKSGEPKIKLTIKQLQSVEEYYSMVTKVKSKLDEMKNCPDEDISNHAKELF- 540 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE-------QQWQAIIAEGLGAQYGDAVP 633 + E + ++ N + + + I + ++V Sbjct: 541 -DLIYEKSKLKQEFENDEDSSKRLNVEEVGNLLVQFKPKDEILPDYIDGSGDVEEEESVD 599 Query: 634 LSLLRDELAQRLDQERISQRFLAGP---------------VNICTLMPMRSIPFKVVCLL 678 + + + +++ T+ + + + VV + Sbjct: 600 DRNFLARFIESVGLYETNDEVENNKSDSNGNDKAKEEKSCISLSTIHGSKGLEWPVVFVQ 659 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 G+++G+ P + + +++R F A+ + LYIS S Sbjct: 660 GLSEGLLPAGFSMRNSFNDND-------ENLNEERRCFYVAVTRTKVLLYISSYTESQSK 712 Query: 739 NSERFP----SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 R S ++ L + S A + +++ + L+ D + Sbjct: 713 AFYRQALDQESRFIEPLKKSLAHS-----QLAFSEEKNLRALYELLSKPFPTENLDWTQF 767 Query: 795 QPGERQSYAR 804 ++S+ R Sbjct: 768 YETYKKSFRR 777 >UniRef50_B1VAQ4 ATP-dependent DNA helicase n=1 Tax=Candidatus Phytoplasma australiense RepID=B1VAQ4_PHYAS Length = 713 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 53/418 (12%), Positives = 132/418 (31%), Gaps = 66/418 (15%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 +ILE N ++ F + N + + + H + E + + ++ +++ Sbjct: 292 ENILEKANLLISYNKDHPFKKKLN--SVKGKGTKVNAHFFVDSRIEAQYIVQKIKHLVQI 349 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 RD ++ + +PY + V++ F++ L Sbjct: 350 YH-YNYRDFAILYRVNS-----LGHFLEKYLISAGIPYMFLGNLSFYQKKVVKDFLAYLH 403 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 L + + +++VP + I + + L + V E + + +++ + Sbjct: 404 LAVNPLQDFYLRRVINVP----KRQIGKITITCLEKIVQEKERSFFEILKDYKDIPVSDK 459 Query: 520 GQHTW--RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 Q + L L + + + ++ Y + ++ Sbjct: 460 TQKQLYQFYCLIEELNNKIINNEFEKLSDIITYVDQKTQ---------------YSYQIS 504 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 L ++ ++ ++ A+ ++ I G+ ++ Sbjct: 505 LETQKNPQKANEEQSSLV------------AIEELKSILNQIDESFQGSNLQK---INNF 549 Query: 638 RDE--LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 +E L S V + T+ ++ + FKVV L G+ + Sbjct: 550 LEEVSLNNETKINNSSGNKANNRVKLATIHKVKGLEFKVVFLAGLEKEFF---------- 599 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQEL 751 D + R L A+ AQ+KL+++ + + + PSV +E+ Sbjct: 600 --------DDLDDIQESRRLTYVAVTRAQEKLFLTGVSQRMLFGKNFSHEPSVFFKEM 649 >UniRef50_A9BJS5 Putative uncharacterized protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BJS5_PETMO Length = 1081 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 69/564 (12%), Positives = 166/564 (29%), Gaps = 51/564 (9%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 I + N + R KR + +I ++ E+E L + L Sbjct: 264 ITNIHNFLKNEGFEFQSKRKGLKRIFENT--NIEIFPMNNDVSEIETLTKEIKRRLIS-E 320 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 L+P D+ V+V + + + D +PY + ++ + + Sbjct: 321 NLSPDDLGVVVPNNST-----AKLLADYLEDAKVPYRFKNDVPLNESQIVLILLQPIKTL 375 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 ED+LA+++ +TE + + ++ + + I +++ + Sbjct: 376 VRGCEVEDILAMIESGY----GGVTELTMEQIENYLKHLNLFYDIQKSSLK------NRK 425 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 W + + + S + + E + EL L ++ L ++ ++ Sbjct: 426 EKWMNTVEKEIDK--RSSQLKGTEEIERISEELKDLRELKKCLGNIFSLLEDIQKSKDRK 483 Query: 582 R--PLEEWLPVCRDMLNAFFL------------PDAETEAAMTLIEQQWQAIIAEGLGAQ 627 R + ++ + ++ +N + P A+ E + Sbjct: 484 RYFSVSDYRELVKEWINTYLSHFNILKTYEDVLPVESQLNALKAFETLVFNVEENLEKIL 543 Query: 628 Y-GDAVPLSLLRDELAQRLDQERISQRFLAGP-VNICTLMPMRSIPFKVVCLLGMNDGVY 685 + + L+ + E + V I +L R + K +G + Y Sbjct: 544 KSDKNLGIEKFYKILSSLIQIETYRESERYDNTVEIMSLEDSRFVKKKYKYFVGFTEENY 603 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 P MS + R R ++I A + +Y PS Sbjct: 604 PSIKVNPFITSMSNEGTSIARHSEKISRRNLFISMIFA-DNIIFTYPNA-KLSGEPILPS 661 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 +E + Y + + T G+++ + Sbjct: 662 PYEKEFRNNFKNVKYSSEFLSKKEILPKDPENIFSESEATIY-----YILNGKKEYLQSK 716 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPE-TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 + K + L + + + P + + L + R + Sbjct: 717 HCTDIERLKKEITNPSWQLYKNTDLGRLSHTKITTYVDCPFKYY----LGIEGR--LNGD 770 Query: 865 PDTEPFILEGLSRYQINQQLLNAL 888 D F +GL ++++ +++ + Sbjct: 771 KDFGKFF-DGLIKHRVMKEIFSKY 793 >UniRef50_C0QS88 Putative uncharacterized protein n=1 Tax=Persephonella marina EX-H1 RepID=C0QS88_PERMH Length = 921 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 112/858 (13%), Positives = 243/858 (28%), Gaps = 128/858 (14%) Query: 170 KALVEYTHQLGQPRWHRANLYQRF-IETLESATTCPPGLPSRVFICGISALPPVYLQALQ 228 + ++ + A + + I + L + I I Sbjct: 40 RRAIKEYLSDSLGLLYNAEFFTKLDIARELTGKEPINNLEKEILIDSI------------ 87 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYL------AKLLTRQRRHSFEDRELPLFRDSEN 282 K +IH+ R Y I+ R + E + + ++ Sbjct: 88 --LKEKDIHIEGL--SRAYSETIQKLKESKIEPQDLPEGERLKEVYEEYQRKLADLNLKD 143 Query: 283 AGQLFNSDGEQDVGNPLLASWGKLG-----RDYIYLLSDLESSQELD------AFVDVTP 331 + +D L +G RD L SS + F Sbjct: 144 REDIITEASLKDYKTDFLFVFGFHSLTEIDRDMFRSLLKNRSSVYIPINPGYSVFEKNPY 203 Query: 332 DNLLHNIQSDIL---ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEV 388 + E+ + S +I F V + E+ Sbjct: 204 LRSTFEFFKNFRLKTYTESIKKEDQKLTSLMFSSAITEEGIGCKNIKFIVSKGKRDEIVK 263 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 + +L + I V++ D+ SY I++VF +PY +S+ Sbjct: 264 IAKSILKI---KENTRWYKIGVVINDLGSYLKDIKSVFQEY----NIPYYLSEENRFIDQ 316 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 + L SL ++ F D+L + +L +I + + + + E Sbjct: 317 LPFKKMFLLFSLKENNFSKIDLLNSISKEIL----NIDDIDISSFEKDLIE--------- 363 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 +++ G ++ + + G Sbjct: 364 -------------NSYEEGYESIIKLLSDKGYNGIID----------------------- 387 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 L + + + L + + D++ FF + TE + I + + Sbjct: 388 --LLRSIKKIPERGSLNDLIQNYTDIIERFFKKNEHTEK----FLNILENIQLNHVLKKL 441 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + S L L++E I +R V I T I F + + MN+G YP Sbjct: 442 YPEITYSEFNSILLHYLEEEDIDRRLKGDIVQIRTPNISEGIIFDYLFFVDMNEGKYPSI 501 Query: 689 LAPLGFD---LMSQKPKRGDRSRRDDDRYLF--LEALISAQQKLYISYIGRSIQDNSERF 743 + L + ++G ++ ++ + +YISY R + N Sbjct: 502 IKDDPVINNTLRVKLEEKGLPKLNASYWQQIITFISIFNSSKNIYISYKNRDDKGND-LS 560 Query: 744 PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA 803 PSVLV+EL+ Y + L ++ E L + N ++ Sbjct: 561 PSVLVEELLRLNYGRSYFENGDTLKLEDPEE--ITTLKEFRLKNAAHLINTDNLLKKVVE 618 Query: 804 REWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRL---------- 853 + + + + LQ F P R F + Sbjct: 619 AHIKRESEYITEYEGYVNVNPKYI---KLTPSKLQTFSDCPYRFFLSSVINPDTFEIVDT 675 Query: 854 -QVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAF 912 ++ E + I + F+ + + +++ + ++ L + + + Sbjct: 676 ERIPPDKEGTAIHEILEFVYRKRIKDKSRLRMIIPALVKEKFRPLLEELKPSARIFEEKR 735 Query: 913 GEIFWETQCQEMQQLADRVIA-CRQPGQSMEIDLACNGVQITGWLPQVQPD------GLL 965 + + + + + +R+ M+ + G + TG + + D + Sbjct: 736 VLLLSDILTEFVIKDLERIRNIYIPEVIEMKRSVNIYGFKFTGKIDRADRDLKNGKYIIY 795 Query: 966 RWRPSLLSVAQGMQLWLE 983 ++ + + L+ Sbjct: 796 DYKTGKKRIDDLRKALLK 813 >UniRef50_Q6C4F2 YALI0E27269p n=1 Tax=Yarrowia lipolytica RepID=Q6C4F2_YARLI Length = 820 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 54/450 (12%), Positives = 129/450 (28%), Gaps = 65/450 (14%) Query: 307 GRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRP 366 R++ + ++ + + + IL + ++ +++ Sbjct: 279 ERNFQEMRDMYPDTEVVFLTENYRSTDP-------ILAIAEEVISQDASRYGGCGQSRKL 331 Query: 367 LDPLDSSI--TFHVCHSPQREVEVLHDRLLAMLEEDPT-LTPRDIIVMVADIDSYSPFIQ 423 + D ++ + +E + + + + + L I ++ Sbjct: 332 VGHSDFAVTPELTKYANKYKEAVGVAETIRDLRKVTKNRLPLSSIAILCRTNRQ-----A 386 Query: 424 AVFGSAPADRYLPYAIS-DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 ++F A ++ + ++ L S + ++ P R Sbjct: 387 SMFEEALVAGNTACYLAEGGANFWDKSHIRIVLNYLRCAYSDEDRSAFMEAMNNP----R 442 Query: 483 FDITEEGLRYLRQWVNES--GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 ++ + + Q+++++ G D + F R + + Sbjct: 443 RRLSGKTAMLISQYLDDNYGGPNSVYDLLHDAAHRKGLLNITQPSFEGLRQFMDHIDHLR 502 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 DE + + VG L+ + + E L + + F + Sbjct: 503 DLINSKEYYMDEVIEYLLDKVG--------LDEYITTMGVREKAYERLSEVGQISDRFSV 554 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 + + + LS L L + + S V Sbjct: 555 ITEAAD---NNLWDN---------EVSGDISEQLSPLGQFLNAQALRADNS-GNAENGVI 601 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 I T+ + + + VV + + DG P ++ D ++R LF AL Sbjct: 602 ISTIHRAKGLEWPVVFVPNLLDGDLPMRMPDTDID---------------EERRLFFVAL 646 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 A++ LY+SY E PS + E Sbjct: 647 TRAKRLLYMSYS-------REGEPSTFITE 669 >UniRef50_Q2RL77 ATP-dependent helicase/nuclease subunit A n=2 Tax=Thermoanaerobacteraceae RepID=ADDA_MOOTA Length = 1405 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 69/464 (14%), Positives = 136/464 (29%), Gaps = 79/464 (17%) Query: 383 QREVEVLHDRLLAML------------------EEDPTLTPRDIIVMVADIDSYSPFIQA 424 +RE ++ R+ M+ +E LT RDI++++ +P Sbjct: 596 EREALLVARRIRRMVRGTPERPGPEFQVWDQEKKEYRDLTYRDIVILLRATRDRAP---- 651 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 VF A +P + +E +SLL + D+ + A+L P++ Sbjct: 652 VFLEALKQYGIPAYADLGSGYFAATEIETILSLLRVIDNPHQDIPLAAVLRSPIV----G 707 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW--------------RFGLTR 530 ++ L +R + L + + G Sbjct: 708 LSAGDLARIRLAAPGEDFFTAVVKAAGAPLLPFTARESAAPSSTATGSGGALDNQPGQDP 767 Query: 531 MLLGYAMESAQGEWQS------VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 + + +E Q W+ G +L L L +L WR LA+ +PL Sbjct: 768 VCIAPYIEDTQEPWRDDHPGPGAAAGKAVPGKDRDLASLLREFLARLERWRT-LARRQPL 826 Query: 585 EEWLPVCRD--MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 + + F + + G + L Sbjct: 827 GDVIWQLYRETGYLEFVGGLPGGAQRQANLRALLDR-ARQFEGFARHGLFRFLRFIERLQ 885 Query: 643 Q--RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ- 699 Q + V + ++ + + F VV + G+ G + + F L + Sbjct: 886 QNEGDLGTARALGENEDVVRVMSIHRAKGLEFPVVIVAGLGKG-FNLRDLSGDFLLHGRL 944 Query: 700 -------------------KPKRGDRSRRD---DDRYLFLEALISAQQKLYISYIGRSIQ 737 G R R + ++ + AL A++KL ++ R + Sbjct: 945 GLVPLYLDAAAGIKYPTLPYLATGHRLRLEALSEELRILYVALTRAREKLILAGTVRDLP 1004 Query: 738 DNSERF-PSVLV--QELIDYIGQSHYLPGDEALNCDESEARVKA 778 +E + S+ + ++L + P D L A Sbjct: 1005 RQAENWCASLFLPGEQLPPVLTSRAGNPLDWLLPALARHPDAAA 1048 >UniRef50_C7RA34 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RA34_KANKD Length = 913 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 116/815 (14%), Positives = 233/815 (28%), Gaps = 123/815 (15%) Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRE----------LPLFRDSENAGQL 286 HLL ++ W DI + + L S + + + + Sbjct: 77 HLLSDQQSQFIWQDIIERSDWNDFLLNINATSSKAWQAWQQYQQWQLDITQSLTWDKDTQ 136 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE 346 D + L S I LL +L S +L + I +L Sbjct: 137 AFKDWASEFVQRLEESHWIDSASSINLLLELMSQHQLPVADTIFTAGF-EQITPQQQKLF 195 Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQRE----VEVLHDRLLAMLEEDPT 402 +R +EE + S+ +S + E + D ++ L+++P Sbjct: 196 DRLRQTSKLEELASSNTTVTP-------QVLSFNSMREEFKTAIHQARDSVIKALKDNPD 248 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP--------YAISDRRARQSHPVLEAF 454 R ++V +++ + I+ + P Y IS + P++ Sbjct: 249 QPFR-CAIVVPELEKHKALIERLLWQELTPSLEPEQQPVVGIYDISLGESLNRQPLVVTA 307 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 ++LL + ++ + LL P SG + L Sbjct: 308 LNLLKFLNGSIEAQVLQQLLLSPYFGKP---------------KASGTGHDQLLSDRARL 352 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 E H RF + + + A L+ L+ Sbjct: 353 EKFLRKSHKQRFA-------------------ISELSDLAQQAKITSSSFADLIESLSSA 393 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT-LIEQQWQAIIAEGLG--AQYGDA 631 ++ + + L +W+ +L+A P T + ++Q + Y + Sbjct: 394 QQLVKTKLTLADWVKRLTSILDAAEWPGMRTLQSREYQVQQTLYDCFNQLRQFQVFYPEV 453 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 + S L + L+Q + +++ Q P+ + L+ + F + L G V P Q P Sbjct: 454 ISFSSLLELLSQLIAEKQFHQELPKAPIQVMGLLETLGLEFDQLWLTGATYQVLPAQPNP 513 Query: 692 LGFD---LMSQKPKRGDRSRRD-DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 F + Q G ++R+ + +L+++ + +SY SE PS Sbjct: 514 NPFIDKQTLKQHQMPGSSAQREYEYAQQLFNSLLASGDDVTVSYPRFDGS--SELLPSPF 571 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 + E + A L + + Sbjct: 572 IAEFPE------------------QTIAANARLAPDFINQIVESSRREDSVESYQDTHGQ 613 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 P A+ K + F + P +A+ RL+V E + Sbjct: 614 PLATGVVKGGTGF----------------FRDQINCPFKAYMSYRLKVKEFEEVEQ---- 653 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAERLF--RRFRAAGDLPYGAFGEIFWETQCQ--- 922 L + R + +L A ++ D+ + + L + E Q Sbjct: 654 ---GLNAMERGSLVHTVLEAFWKEHDSNEILTDKSESQLSSLIEPYLASVLDEYSEQFYY 710 Query: 923 -EMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW 981 ++ AD + + + T P+ + L V + ++ Sbjct: 711 LQLADFADNEFQRLLKQLVEALQVDAKRLPFTSLPPEQDQSITIEGLTFNLKVDRIDEVE 770 Query: 982 LEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQA 1016 L+ G K+ P + A Sbjct: 771 DGLLIIDYKTGTPTRAKLYPKNK--ELAPEEPQLA 803 >UniRef50_A7AXS4 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXS4_RUMGN Length = 625 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 55/467 (11%), Positives = 135/467 (28%), Gaps = 92/467 (19%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 VG+PL A + G D ++L+ +++ + + + DI+ N+ + Sbjct: 236 VGDPLQAIYSFRGGDSRFILNFDTDYKDVKV---INLNTNYRCSK-DIVFTANKLALSIP 291 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 + E + ++ + + DI ++ Sbjct: 292 DSQHKNYVESISNKENFQIPELRHFPDDYEECLWVASKIGEL--KFKGYDYNDIAILART 349 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 S D + + I D + P ++ IS L + +E L Sbjct: 350 NAQLQKL-----ESTLHDEDIAFEIVDGKTFTELPEIKLIISYFKLALNTNDNESFSYLY 404 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + P + W L + L Sbjct: 405 NKP--------------------------------------------NRW---LDKKFLK 417 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP--LEEWLPVCR 592 ++ +++ Y+ + + ++ L + + + + R Sbjct: 418 EVTDN--SFKRNISLYNSMFTIDRRNW-RFKKGIDEIIEVINYLQNNQNSNISDLVRFLR 474 Query: 593 DMLN-AFFLPDAETEAAMTLIE--QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 + L+ F+ + + IE + + + + + Sbjct: 475 NRLDIDKFVTKGKQSDDGSYIEQIDNLNSFENICSKYS-----SIKEFVSYIDELNTEME 529 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 V + T+ + + + VV ++G N+ + P Sbjct: 530 NKD---NDKVKLLTIHKSKGMEYPVVFIIGCNEEILPHYKN----------------ENV 570 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 DD+R LF A+ A+++LY+SY+ + + + S ++++ + I Sbjct: 571 DDERRLFYVAITRAEKELYLSYV--DLYNGQTKLISSFIKDVENTIK 615 >UniRef50_A5DZQ5 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DZQ5_LODEL Length = 939 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 60/466 (12%), Positives = 145/466 (31%), Gaps = 76/466 (16%) Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL--LAMLE 398 DIL+ R + +++ P + S +E + ++ L L Sbjct: 340 DILDFSERVMTQQPDRILKNLNSQCPHSFKPVYLNL---SSAAQEASWIAYQIDFLQQLP 396 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 +P + +I ++V + + + + +PY + +A + A + L Sbjct: 397 HNP-IKYDEISILVR-----AAYQTRAIEAELVRKRIPYIMVRGKAFWERKEVTAIMDYL 450 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + +L L+ P + L + + + + N Sbjct: 451 RVCGEPNDRIAILQTLNYP----KRGFGAVTLEAIDRAITTAITSSNATSINTSTTTTTV 506 Query: 519 TG-------QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG--LIAELVGHLASLLM 569 T + + +SA+ + +L + G L + L + Sbjct: 507 VDDLNNVNNTITVKDANNTFINKRTKKSARDVLRGLLESNNQYGVKLPLKAKESLKGYIK 566 Query: 570 QLNIW---RRGLAQERPLE--EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 ++ L +E ++ + + + L + + + + Sbjct: 567 MIDQAQVMLDNLEKEEQIDPLKVARLFDQIYTDSGLKKEYESEEKEEVRLNVEEVKTQFC 626 Query: 625 GA-----QYGDAVPLSLLRD-------------------ELAQRLDQERISQRFLAG--- 657 + + V L + + + + ++ + + G Sbjct: 627 EFTPQSDLFMEEVTLDEIEESNNGKTDLINSTNDDLGENFIRKFVESVGLYEDDKTGDEK 686 Query: 658 -----PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 V I T+ + + + VV + G+++G+ P GF L + D + +++ Sbjct: 687 KKKKVGVAISTIHGSKGLEWPVVFVPGLSEGLLPA-----GFALTTD-----DPNSLNEE 736 Query: 713 RYLFLEALISAQQKLYI-SYIGRSIQDNSERFP----SVLVQELID 753 R F A A+ L+I SYI + +S R P S ++ + + Sbjct: 737 RRCFYVASTRAKTLLFISSYIEKEYSGSSWRKPIDTVSRFLKAIDE 782 >UniRef50_B7GQ32 ATP-dependent nuclease subunit B-like protein n=2 Tax=Bifidobacterium longum subsp. infantis RepID=B7GQ32_BIFLI Length = 1101 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 74/629 (11%), Positives = 171/629 (27%), Gaps = 106/629 (16%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 + + + + + + +S + EV + + ++P ++ Sbjct: 240 DPDYLEALQRRDDGNRNTLSSIFASSASTSVCAMPDTTAEVRYAAASIKKFIADNPEISY 299 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 D++V D+ SY I + F + +P I+ HP +A + LL Sbjct: 300 GDVLVTSRDLGSYQAQIASEF----TYQGIPINIAASSTMLDHPFADAILGLLDSATYEL 355 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 + +L +L + + ++T + + +N + Sbjct: 356 QPQSILRILRSGIFSRYLNLTPTAIDDIENQLNSNNP----------------------- 392 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 A + + LI + + Sbjct: 393 ----------ATVWIDTDIPFAAHLQKIRSLIQQAADVFRP------------RPSATVR 430 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 E L L + + T+I + ++ + + + V + LA L Sbjct: 431 EALGGMVGFLTEYAQTIEGSAPVWTVIMNAFDDMVQQLGNDYFAEYVGI--FARNLASTL 488 Query: 646 DQERISQRF-LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR- 703 + I R A V++ + P++ V +LG ++ P G ++ Sbjct: 489 AAQSIDSRPVSASAVDVLPM-SSPLHPYRYVIVLGCSESQLPAIPHETGLLDDGERLDLS 547 Query: 704 ---GDRSRRDD---------DRY-----LFLEAL-ISAQQKLYISYIGRSIQDNSERFPS 745 + + + +R L+ + SA Q+L ++Y N+ + S Sbjct: 548 QFLTSQGKTLEAWNVLSGTVERRSGQEPLWFNGVVASATQQLSMTYPKS--LRNAAQACS 605 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM-PFDPQ-NYQPGERQSYA 803 + + + E K + + T P D + Y+ R Y Sbjct: 606 PYISQW-----------ETGTSDTSEIIGASKRAVPTVETEYRPLDRELAYRLFTRPDYV 654 Query: 804 REWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE 863 + + ++ ++ +P F + L+VN Sbjct: 655 HRVYRTHGADPSISTRVFNA---------SVSAIETYYRNPYEYFLKYGLKVNVAN---- 701 Query: 864 IPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQE 923 F + +L V R A Sbjct: 702 -----AFAFDAALEGTFYHAVLEHAVNAWIERHKNERDLNGLPPQPTAPDMQELIADYSR 756 Query: 924 MQQLADRVIACRQPGQSMEIDLACNGVQI 952 + + ++ ME+ + N +++ Sbjct: 757 LDRGCNQWTVLN-EDPRMEVLRSSNRMRM 784 >UniRef50_A5WC18 UvrD/REP helicase n=2 Tax=Psychrobacter RepID=A5WC18_PSYWF Length = 742 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 65/541 (12%), Positives = 137/541 (25%), Gaps = 97/541 (17%) Query: 248 WGDIKDP---AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWG 304 + DI L R+ + N Q D + N L G Sbjct: 283 FDDIISQVVYHLKNNLQFRKLIQDTYRHVMVDEYQDTNIPQKQLIDYLCEPDNVSLMVVG 342 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE----LENRAVAGVNIEEFSR 360 + + + + F D PD L ++ + L+ +I + Sbjct: 343 DDNQSIYAF--RGANYENILLFADGYPDAKLIKLEQNYRSTPAILDYVNALSEHITLGYQ 400 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 L T + ++E + D+++ + P D V+ S Sbjct: 401 KKLFSNLAIEGEKPTLCRRSNDKQEAVYIADKIIEL---KPEYDFNDFAVLSRT-SFQSN 456 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 IQ F R +P+ + ++ ++L+ + + + +L Sbjct: 457 EIQLQF----MQRNIPFIVVGGIKFIEKRHIKDILALVKILYNPNDTIAWHRILT----- 507 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 + + + Q + S Sbjct: 508 LFSGVGDVTASKITQAITSSN--------------------------------------- 528 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 S+ P + + + +L Q+ + + L D Sbjct: 529 ----DSLQPLLDPKLTKNKAP------INELYHVLIKAQQQATVADILQTLIDFYAPILK 578 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA-----QRLDQERISQRFL 655 + + + + E L + LA + + Sbjct: 579 TLEDNWRERSEDFRVLINLAQEHS--------SLDNFLENLALDPPNDSVAVMTNPEDKQ 630 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 V I T+ + + + VV + + DG+ P + F +++R L Sbjct: 631 TDAVTISTIHSAKGLEWPVVFVNALVDGLMPHHRSLHEF------------EALEEERKL 678 Query: 716 FLEALISAQQKLYISYIGR-SIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 F A A+ LY++ S S + E+ Q + +S Sbjct: 679 FYVACSRAKTHLYLTAPDYFSSFAGYFDKISRFISEVATDTLQVDAAESIRKSDDSQSND 738 Query: 775 R 775 Sbjct: 739 P 739 >UniRef50_C0QD81 PcrA2 n=2 Tax=Bacteria RepID=C0QD81_DESAH Length = 1157 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 70/484 (14%), Positives = 142/484 (29%), Gaps = 101/484 (20%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 +G+P + +G G D ++ F P +Q + E A Sbjct: 732 IGDPDQSIYGFRGSD----------NRYFQQFQADYPGAEKIVLQRNYRSTEAILRASFQ 781 Query: 355 IEEFSRSDNKRPLDPLD----SSITFHVCHSPQREVEVLHDRLLAMLE------------ 398 + + D + S + E V+ R+ ++ Sbjct: 782 LLTHGNQEGVSQKVFSDIRGRERLVIIEATSDRAEAVVVGKRIETLVGGLSMFSMDAGKV 841 Query: 399 ---EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 ++ + D+ V+ +F +P+ ++D+ + +HP + + Sbjct: 842 GSTQENEFSFADVAVLYRTRRQ-----GKIFADVFQQAGIPFQMADKESLLNHPGIGELV 896 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 SLL L +D+ + + + + + L QW ES Sbjct: 897 SLLRLLKGGATFQDLFLVFNH----FKAGAGKGTRQKLGQWFRES--------------- 937 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 + E P+ IAE + +A +M L Sbjct: 938 -------------------ELSPAGAVELLGAAPFVHVRKDIAETLLGVARKIMALGQTV 978 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 +GL L+ + L D + + LG +S Sbjct: 979 QGLGACDCLDLLAS--KADLYPLIKSDETS-----------CRVFDRLLGDARNRDDDIS 1025 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 + L L+ + S A V + T+ + + + VV + G G+ P Sbjct: 1026 CFLESL--SLENDSESLWPSAEKVTLMTMHGAKGLEYPVVFVTGCEPGLIPFAFPGR--- 1080 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELID 753 + D++R LF A+ A+ L ++Y + R PS + ++ Sbjct: 1081 ---------EPEDIDEERRLFYVAMTRARDILCLTYSTKRRIYGITRQTGPSTFLLDIEA 1131 Query: 754 YIGQ 757 + + Sbjct: 1132 ALKE 1135 >UniRef50_UPI000169433B UvrD/REP helicase n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169433B Length = 608 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 54/497 (10%), Positives = 139/497 (27%), Gaps = 73/497 (14%) Query: 348 RAVAGVNIEEFSRSDNKRPLD--PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 +A I K ++ + + E E + + + + + Sbjct: 25 LGLANEVISHNEERRPKTLYTGIREKGTVQYLSPLTTDHEAEAILEHIKQQVGKGK-RKY 83 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA-RQSHPVLEAFISLLSLPDSR 464 DI ++ + + +A F + +P+ H ++ ++ L L + Sbjct: 84 GDIAILHRT----ASYSRAFFERLLME-DIPFVQYGNSDLFYRHWLIRPVLNHLRLALNS 138 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + +L +A + W+ E + + ++ P ++ Sbjct: 139 RDMKACEGVLLTLYIAKEKGAS---------WIREKEKKKAKKWPLIHLMDHPDLKENQK 189 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 + R+ ++ + E + Sbjct: 190 EKLMERL--------------------------------------KMIKSLQAFKPEEAI 211 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 + D + P+ +T ++ + ++ E L + + Sbjct: 212 RQIRIKFYDAFIDAYDPEPDT-----QYKETLKEMLDEL-ETSARRFTGLEEFLGFVDRI 265 Query: 645 LDQ----ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA--PLGFDLMS 698 D+ E + + + + + T+ + + F VV L+G+++ V P + G Sbjct: 266 TDKYMVMESLKKEDESDALKLMTIHRSKGLEFPVVYLIGVSERVLPHSTSLKKEGCKDNR 325 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 + + G + +++R L A+ A+++LYIS G + S + + + Sbjct: 326 FEGEHGAAAALEEERRLAYVAVTRAKEELYISSPGY--YRGKQAHVSRFILQPFESRRSR 383 Query: 759 HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHS 818 + + D + Q Y + +SQ + Sbjct: 384 VSNTAQPVPASAAKKPSAIQDRSMPEMGNASDKK---TVRTQVYTAGYGTNSSQPERKAR 440 Query: 819 EFVQPLPFTLPETVPLE 835 L L Sbjct: 441 HDQPKLVSPAASVTSLS 457 >UniRef50_C2BJG0 Helicase n=5 Tax=Corynebacterium RepID=C2BJG0_9CORY Length = 1027 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 87/730 (11%), Positives = 182/730 (24%), Gaps = 121/730 (16%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 + + + P + I+ R +V+ + + + + Sbjct: 271 ASSRFLRDFPADHDIELTEPHRTPSPACISIVDSDGRLR--DVVANTVRRR-HLEDGVPW 327 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS-DRRARQSHPVLEAFISLLSLPDSR 464 RDI V+V +P IS ++ A + L + Sbjct: 328 RDIAVIVRSTGDIGQM-----RRTLLAAGVPVHISPTDVVLAEQRLVSAVLLALRALEED 382 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + ++ LL P G D +R L + Sbjct: 383 LSNSELEELLTGP-------------------------VGGADPVTLRRLIRGLRRWDST 417 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 G+ + E Q + ++ L + L Sbjct: 418 TRGIDSLRGLLYGELPDFNGQLTEREYSILERVRAVLSAGRDALASGDSVEEVLWAVWSA 477 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 E + ++ + + + + A + L + ++ Sbjct: 478 TELDNRLQASALRGGATGSQADRDLDAMMALFDAAGD---YVERRPDSSLRAFLTHITEQ 534 Query: 645 --LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ-------LAPLGFD 695 R + + V I T + V + G +G +P D Sbjct: 535 ELPTGVRDRRTAIPQAVEILTAHGAVGREWDTVIVAGAQEGSWPSLGETGSIFGQEDLID 594 Query: 696 LMSQKPKRGDR-----SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 L+ SR ++R LF A +Q+L I + + ++ PS + E Sbjct: 595 LLDHDIDPDTPVSHVASRLAEERRLFHVATTRHRQRLLI-AAVENPEGDTVSEPSRFISE 653 Query: 751 -------------------------LIDYIGQSHYLPGDEALNCDESEARV--------- 776 L +G P +L + Sbjct: 654 FAGRGVDVPGQAARRQAKRALRRTQLPRELGLDVPEPAPVSLRDGLEVDPLDVAVLSVPA 713 Query: 777 ----KAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV 832 + + + + A + A + + +P ++ Sbjct: 714 FVAQLRRVVTNQESGEVERKQAARQLARLAAADIPGAHPEQWWSARSVAAEMPLHTSGSL 773 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD 892 ++ P++A +P E L R + A+ Sbjct: 774 SPSRVEALLNCPLKAVLGNV-------------AEDPSTEEHLLRGTLAHAFFEAIGRGM 820 Query: 893 DAE-------RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL 945 DAE F R + F + T ++ A + Q +EI + Sbjct: 821 DAEKAKLLVMEAFERIQDVPQWQL-RFRLDEFSTLLDRAREWARQ-SEVNQELAGVEIPV 878 Query: 946 AC---NGVQITGWLPQVQPDGLLRWRPSLLS------VAQGMQLWLEHLVYCASGGNGES 996 V+I G++ ++ DG + L + + ++ + Y + +G Sbjct: 879 GVRVSEEVRIGGYMDRLLRDGEGNYLVVDLKTGRSKPAKKEGEDHVQLMTYQLALAHGAF 938 Query: 997 RLFLRKDGEW 1006 DGE Sbjct: 939 DGHQVHDGEG 948 >UniRef50_B3E1Z6 UvrD/REP helicase n=3 Tax=Geobacter RepID=B3E1Z6_GEOLS Length = 1082 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 73/545 (13%), Positives = 133/545 (24%), Gaps = 119/545 (21%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIY 312 D ++ ++ + ++ + + L +G+P A +G G D Y Sbjct: 635 DESFKQRVQQAVQHLFVDEFQDLNRSQYDLVQLLAEQATVFAIGDPDQAIYGFRGGDLRY 694 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL-- 370 F +V LL + L + AG I Sbjct: 695 FFR----------FAEVPDTVLLPLRTTYRLPRKIVQAAGSLICRNLICSGLPLSAADNC 744 Query: 371 -DSSITFHVCHSPQREVEVLHDRLLAMLE----------------EDPTLTPRDIIVMVA 413 D +I FH SP E E++ R+ ++ L+ D V+ Sbjct: 745 PDGAIEFHRALSPGAEAELIVRRIEELIGGVDSFSRSTGRSGNTPSPDNLSFADFAVLFR 804 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 A R +PY + L LL L+L Sbjct: 805 LGRQ-----AEELAEALTRRGIPYQLVGATPFYMESKLRPLYQLLQAASGSDEIALWLSL 859 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 A + L L Sbjct: 860 -----FGALKGVGTTTLDRLE--------------------------------------- 875 Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD 593 S L L L+ ++ A + Sbjct: 876 -----SELPLRGDFFELAAEHDHTPATGKALKLLATTLDRLQKSAADQGVAAALRISL-- 928 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 F + + + + + + LS L Q Sbjct: 929 ---PVFGLELDDADRLLQMAEGF--------------GTDLSAFSHHLKQYASATVYD-- 969 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 A V + + + + F V+ + G+ +G++P L +++R Sbjct: 970 PRAEAVALMSCHSSKGLEFPVIFMTGLEEGIFPCTLMGTP--------------NVEEER 1015 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFP-SVLVQELIDYIGQSHYLPGDEALNCDES 772 LF L A+Q++ ++ G S + EL + ES Sbjct: 1016 RLFYVGLTRAKQRVILTASGYRGWMGQGLRELSRFITELPAELVDKPEAGRQRRRAPVES 1075 Query: 773 EARVK 777 EA+++ Sbjct: 1076 EAQME 1080 >UniRef50_C1ZK16 ATP-dependent exonuclease V beta subunit, helicase and exonuclease domain-containing n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZK16_PLALI Length = 1226 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 81/680 (11%), Positives = 181/680 (26%), Gaps = 108/680 (15%) Query: 382 PQREVEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 +RE + + R+L +L + T+ P DI ++ + + V+ A Sbjct: 556 RRREADWIARRILELLADPTPRIREKSGPWRTIVPGDITILFRALTNL-----EVYEQAL 610 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 + Y ++ RA + + L D ++ LL P + Sbjct: 611 EAAGIDYYVAGGRAFFAQQEIYDLAHLCQFLDDPEDGFSLVGLLRSPFFCFSDPL----- 665 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 + + + +G Q + Sbjct: 666 --IHRLASRAG------------------------------------GITQSLFAEASVV 687 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 S V A L L R R + L + A + + Sbjct: 688 SGLSPEETAQVQFAAQTLGSLVEQRDHWPLARIIRRALEL--TGYEAIVSQEFLGSRKLA 745 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ-RLDQERISQRFLAGPVNICTLMPMRS 669 + + + + A A ++ LR+ + Q ++ + + V + ++ + Sbjct: 746 NVHKAI-ELARQFDLAGGSRAAFVTQLRESIDQESREELAATHPESSSVVRLMSIHQSKG 804 Query: 670 IPFKVVCLLGMND----GVYPRQLAPLGFDLMSQKPKRGDRSR---------------RD 710 + F VV + MN P L P L++ G+R + + Sbjct: 805 LEFPVVFVADMNRPRKTESLPPTLHPQLGALVTPSNPLGERQKHPVGQFIEIMEEAASLE 864 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA---- 766 + + L A A+ L +S + + S + L L ++ Sbjct: 865 EYQRLLYVAATRARDLLILSAGIKGFDEGKF---SPWMLVLKQVFHLETGLLRNDPWFAS 921 Query: 767 -LNCDESEARVKAHLTCLHTRMPFDPQNYQPGE-RQSYAREW--LPAASQAGKAHSEFVQ 822 ++ + T D + + G + S+ + W L A Sbjct: 922 GHEDVKTPQEIPLIRTHHQPPQFIDHRVQRQGVHKLSFPQVWNELELAESLPWPQLVADV 981 Query: 823 PLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 + + L+ F + + + ++ +L + + Sbjct: 982 QRGAEGRRRLSVSRLEEFQEQSSSKLKSLVPAGELEAHSASLSRSDAELLGEMIHGVL-- 1039 Query: 883 QLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ-----QLADRVIACRQP 937 + ++ + L R G E Q ++ +L D + + Sbjct: 1040 ERFEPRAAEESEKALLHRLWLWCQRQPAPPGGQILEQAQQWLKTFASTELIDELAMASEL 1099 Query: 938 GQSMEIDLACN--------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCA 989 + +E L +I G + + D W ++ + L+ Sbjct: 1100 NRELEFSLDWKMTGEEPKRETEIYGLIDVLMKDSQDDWIILDYKTSRLAAGVTDELLLQP 1159 Query: 990 SGGNGESRLFLRKDGEWRFP 1009 + + R P Sbjct: 1160 YRLQLGTYALAVQRLFGRLP 1179 >UniRef50_A7HA18 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID=A7HA18_ANADF Length = 1196 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 90/712 (12%), Positives = 183/712 (25%), Gaps = 123/712 (17%) Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 + E R + + + L+ + +RE + R+ A++ Sbjct: 469 RDDEIRFSDADRLVPRRPEGARPACELLEDHEDGNAAERRRREAGAIARRIRAVVSGAAG 528 Query: 403 L----------------TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 + D+ ++ + + A +PY ++ Sbjct: 529 VAVRERGEGGAERVRRPRLSDVAILFRRLTQIGEY-----ERALRAAGIPYRLARGGGFY 583 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 P + LL+ + A+L P+ +++ L L + Sbjct: 584 QAPEVRDLGELLATLADPSDAIGWAAVLRSPMC----GVSDATLFLLARAGLAR------ 633 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 L + R LG A + + L Sbjct: 634 ---------LARVSPERLAAEVAR-ALGEGGAGALAPEAAERAVASVPAEDWARLTRLLD 683 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 +L+ R LA + L + L+A L + E + + G Sbjct: 684 AWRELHALRDRLAPDALLTRAVERLD--LDAVLLAGPDGERRAVNVAKAIALAARFGS-- 739 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 G A L+ A R +E ++ V + T+ + + + VV + + G P Sbjct: 740 DGGTAAELARHLRAQASRPPREPEAEVEAGDAVALLTVHQAKGLEWPVVFVPDL--GARP 797 Query: 687 RQLAPLGFDLMSQKP---KRGDRSRRDDD-------------------RYLFLEALISAQ 724 R A + + + R ++ R L A+ A+ Sbjct: 798 RSDARRALLDAEGRLCAMRYDPAADRFEETASVRDARAHERRAAAAESRRLLYVAMTRAR 857 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 +L +S + A + L Sbjct: 858 DRLVLSGEASNG-----------------------------AESWRGLVEVAAEARAELV 888 Query: 785 TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHP 844 R+ + P + PA ++ + P V + L + P Sbjct: 889 RRIALEEAGSAPACGPPVDGDDAPAPAEPPAVAPPRLAGAPRVAAVRVAVTELAEYARCP 948 Query: 845 VRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL-NALVEQDDAERLFRRFRA 903 R L + P +P +R + +L A + ER + A Sbjct: 949 RRHLLGRVLGLPEPHGARGAPADDP--GRATARGTLAHAMLAEADLAAPPLERRAQLAAA 1006 Query: 904 AGDLPYGA--------FGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC-------N 948 A Y GE+ + + LA+ R + + L Sbjct: 1007 AARRGYDPRSPGVRRILGEVARFANAEGGRALAEAARDGRL-RREVPFLLRLPSRTRGDP 1065 Query: 949 GVQITGWLPQVQPDGL------LRWRPSLLSVAQGMQLWLEHLVYCASGGNG 994 V + G + + D + ++ + + L+ L Y + Sbjct: 1066 SVYLVGAIDALMVDRRARALTVVDYKYATWRPDAADRYRLQLLAYVLAARRA 1117 >UniRef50_A3DH19 ATP-dependent helicase/nuclease subunit A n=7 Tax=Clostridium RepID=ADDA_CLOTH Length = 1251 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 81/718 (11%), Positives = 194/718 (27%), Gaps = 159/718 (22%) Query: 325 AFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR 384 F + +++ + + ++ E + ++ + + S Q Sbjct: 516 VFDENAKEDITVGGEVEFHLIQTEDEDKNFTFENEGEEGRQADEGEEDEEML---DSIQC 572 Query: 385 EVEVLHDRLLAMLEEDPT----------------LTPRDIIVMVADIDSYSPFIQAVFGS 428 E ++ R+L +++ D + RD+++++ +++ VF Sbjct: 573 EARLVGRRILELMKPDENGRYFSVFDKAKNEYRRVEYRDVVILLRTTRNWA----EVFVD 628 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + +P ++ +SLL + D+ +L++L P++ T + Sbjct: 629 ELSVMGIPVFADTGTGFFKTVEVQVMLSLLQIIDNPLQDIPLLSVLRSPIV----GFTTD 684 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L LR ++ + ++ Sbjct: 685 ELAELR-----------------------------------------LVDKKALLFDALK 703 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRR---GLAQERPLEEWLPVCRDMLNAFFLPDAET 605 ES E G ++ L L WR ++ +R L W + Sbjct: 704 KLAESG--QGEAAGKASAFLENLQKWREMSLYMSTDRLL--WQLYNDTGYYSIVGAMPAG 759 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPVNICT 663 E + + Y D+L ++ V I + Sbjct: 760 EQRQANLR-ILYERARQFEETSYKGLFNFINFIDKLKSSRGDMGSAKILSENDNVVRIMS 818 Query: 664 LMPMRSIPFKVVCLLG---------MNDGVYPRQLAPLGFDLMSQKPKRGDR-------- 706 + + + F VV + G MN + G D++ K + Sbjct: 819 IHKSKGLEFPVVIVAGCGKKFNLQDMNKSILLHHELGFGPDVVDHKLRLSWPSVAKQAIR 878 Query: 707 -----SRRDDDRYLFLEALISAQQKLYISYIGRSIQ-------DNSERFPSV-------- 746 ++ + AL A++KL I+ ++++ D++ S Sbjct: 879 EKIKAETLSEEMRILYVALTRAREKLVITGAVKNVRKAVEKWLDSASVQKSRLSAYDMLS 938 Query: 747 ---LVQELIDYIGQSHYLPGDEALNCDESEARVKA-----HLTCLHTRMPFDPQNYQPGE 798 + + + + G + + + + Sbjct: 939 GANYLDWIGPALLRHKNCGGLRDCVGSAGFRGLLIDDPSVWSVKIWNKTDVQSSGVSEEQ 998 Query: 799 RQSYAREWLPAA------SQAGKAHSEFVQPLPF----TLPETVPLETLQRFWAHPVRAF 848 +S +WL + A + P+ +P V + L Sbjct: 999 GESEFIKWLDSLEKEEPSEYAEETARRLSWSYPYVKASKVPAKVSVTEL----------- 1047 Query: 849 FQMRLQVNFRTEDSEIPDTEPF------------ILEGLSRYQINQQLLNAL-VEQDDAE 895 + R + + PD P L + I ++ L ++D E Sbjct: 1048 -KRRYNEVVSEDVMQFPDYMPVLVKKPMFLEEKKGLTYAEKGTILHFVMQHLDYGREDIE 1106 Query: 896 RLFRRFRAAGDLPYGAFGEIFWETQCQEM-QQLADRVIACRQPGQSMEIDLACNGVQI 952 A L + + + L R++A + + + ++ ++ Sbjct: 1107 AQIEEMVAKDLLTPQQAQSVDAARIRRFLNSPLGKRMLASKSINREVPFNIEIPCHEL 1164 >UniRef50_A6W770 UvrD/REP helicase n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W770_KINRD Length = 1098 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 96/735 (13%), Positives = 193/735 (26%), Gaps = 87/735 (11%) Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 + + + V S +E + RL D + + V+V Sbjct: 355 APQRAARPAPEVAVERGRVEVAVLASATQEASWVAQRLRRRHLLD-GVPWSQMAVVVRSA 413 Query: 416 DSYSPFIQAVFGSAPADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSRFVSEDV--LA 472 A + A +P A+ + P + +S L++ +D Sbjct: 414 GH-----TAALRRSLAAAGVPLAVPLAEVPVRDEPAVRPLLSALTVVLDPAALDDAAARE 468 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 L+ P+ A + LR+ +G D L T T L Sbjct: 469 LVTSPLGGADVVALRRLRQSLRRSELAAGGGRTSDAVLTSALAGALAAPATDLAAATGDL 528 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 + + +G A + + W Sbjct: 529 ALLGADDPALGPAVRVALVLQAGRRALAAAAAGTSAETV--LWHLWDASGLAARWQRAAL 586 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR--LDQERI 650 + + + ++A ++ A D+L Sbjct: 587 AGAVVEGADAGRADRDLDAVLALFEAAGRF--EDRFPGAGSARRFLDQLMAAEVPSDTLA 644 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD----------LMSQK 700 + AG V + T + +V + G+ +GV+P Sbjct: 645 DRAPDAGAVTLTTPQGAVGREWDLVVVAGVQEGVWPDLRLRGSVLGAQALVDVLQGRDPD 704 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 R+ +D+ LF A+ A+++L ++ + + + PS + + D G Sbjct: 705 GPGARRAVLEDELRLFHVAVTRAREELVVTAVR-----DEDERPSAFLDVVADAAGLRTR 759 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRM------PFDPQNYQPGERQSYAREWLPAASQAG 814 +E V R + + A + A Sbjct: 760 ADEEEEPGLATVPRAVSLPALVARLRQVVCAPDAVETPQRRAAAAARLAELAAAGVAGAD 819 Query: 815 KAHSEFVQPLPFTLPET-------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 + VQ L V ++ F +R E Sbjct: 820 PSEWYGVQELTDDGALRGPGEEVPVSPSRVESFERCGLRWLL-------------ESSGA 866 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGD--LPYGAFGEIFWETQCQEMQ 925 P G + + ++ + E D E R LP G E + + Sbjct: 867 RPGDSTGQAIGNLVHRIASEAPEADAFELRRRLDLLWPTLGLPDGWVAETARARALRMVD 926 Query: 926 QLADRVIACRQPGQ-----SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSV------ 974 +LA+ R G+ +++D+ ++ G + +++ D R L Sbjct: 927 KLAEYHRDARAEGRTLVGVELDVDVQVGRARVRGRVDRLERDAEGRAVVVDLKTGKVQPS 986 Query: 975 ----AQGMQLWLEHLVYC--------ASGGNGESRLFLRKDGEWRFPPLAAEQALH---- 1018 + QL + L + ++ G + P+ ++AL Sbjct: 987 RAEVERSPQLGVYQLAAQEGAFPAPPTGPTGTGGAVLVQLGGTQKKAPVQHQRALDEDDD 1046 Query: 1019 --YLSQLIEGYREGM 1031 + + L+ EGM Sbjct: 1047 PGWAADLLARAAEGM 1061 >UniRef50_Q6AFN3 ATP-dependent DNA helicase n=4 Tax=Actinobacteria (class) RepID=Q6AFN3_LEIXX Length = 1125 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 93/683 (13%), Positives = 183/683 (26%), Gaps = 89/683 (13%) Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 ++ I VF +A + +P+ + PV+ +S L + Sbjct: 447 AMLCRSIKKI-----EVFTAALSRHRVPFHVLGLGGLLEQPVIADLVSALRVMHDPTAGS 501 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 +++ LL AR+ + + + LR+ W D+ + P + R + Sbjct: 502 ELIRLL----TGARWRVGPKDIAALRRVA-----SWLAGCDHRFQELEPDV-RDRLRRSV 551 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 +++ ++ + + S V + + QL+ R + L + + Sbjct: 552 AGEESASLVDALDFVVEAPEGHRQLSAFSGSGVERMRAAGRQLDQLRSRAGLD--LLDLV 609 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE-GLGAQYGDAVPLSLLRDELAQRLDQ 647 + + L + L + A + D L LA+ + Sbjct: 610 TIVQQELR--LDIEVAANETAQLGQASLDAFAEQVASYLASDDRATLGSFLSWLAEAEKR 667 Query: 648 ERISQR---FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL-------- 696 + ++ R G V I T+ + + + VV + + +G P L Sbjct: 668 DNLAPRSEDPEPGTVQILTIHGSKGLEWDVVAVPRLVEGELPVPPQSRRGWLAFGQLPNE 727 Query: 697 -------------------------MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 ++ RD+ R L A+ A++ L ++ Sbjct: 728 FRGDSAELPVLPWRTVEDQKALDGAIADFEAENLARHRDEQRRLVYVAVTRARESLLLTG 787 Query: 732 IGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 S Q R P ++EL + E A T P Sbjct: 788 SYWSTQS-RPRGPGAYLRELQG--AGLIAGDAFPPCDDPEDNPLAPASRTVSWPLDPLGA 844 Query: 792 QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF-WAHPVRAFFQ 850 + R + G ++ + L L P F Sbjct: 845 RRRSVETAAEAVRSARARGAGDGGVYARDLDLLLAERARRPSESGLVELPARIPASRFKD 904 Query: 851 MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD-AERLFRRFRAAGDLPY 909 P E + + + D P Sbjct: 905 YVSDPAGVASALRRPMPERPY-RQTRLGTLFHRWVEERYGTVAGRADELDATAHELDDPA 963 Query: 910 GAFGEIFWETQCQEMQQLAD-RVIACRQPGQSMEIDLACNGVQITGWLPQVQP------- 961 G + E A A +EI +A G + L V Sbjct: 964 GEI--LEAERLADLQATFAASEWAARAPDEVELEIHIALAGQVVVCKLDAVYRIADGRHD 1021 Query: 962 DGLLRWRPSLLS------VAQGMQLWLEHLVYCASGGNGESRL-----FLRKDGEWRFPP 1010 ++ W+ + +QL L L + G R+ F+ D R Sbjct: 1022 YQIVDWKTGRAPHDVGDLDRKQLQLALYRLAFAQYAGIEPERIDAVFYFVADDAVVRPSR 1081 Query: 1011 LAAEQALHYLSQLIEGYREGMSA 1033 L +E+ +L E ++ ++ Sbjct: 1082 LYSER------ELAERWQAAVAE 1098 >UniRef50_B3R0N7 ATP-dependent DNA helicase n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3R0N7_PHYMT Length = 708 Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats. Identities = 42/483 (8%), Positives = 144/483 (29%), Gaps = 86/483 (17%) Query: 293 QDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH-----NIQSDILELEN 347 VG+P + + G + F+ L ++IL+ N Sbjct: 241 FAVGDPDQSIYSFRGAEITN----------NKLFLKDFKAKTLILDENYRSTNNILDKAN 290 Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 + + + + + + + + +EV+ + +++ +++++ D Sbjct: 291 LLIQNNSF--YGFTKKLQSFFGKGHKVFPKMFENDDQEVDFVAEKIKNLIKKEK-CNYED 347 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 I ++ ++ F + +PY + + ++ ++ + + Sbjct: 348 IAILYR-----LNGLEKKFEKIFLKKNIPYIVFGNINFFNRKEIKDILAYIKILIDPKQD 402 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 + +++VP I ++ + L E I Sbjct: 403 FYLKRIINVP----SRKIGKKTISNLEIISKEKNI------------------------- 433 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 +++++ + + + + +L++++ LE Sbjct: 434 --------------SLFETLILLCKEEKKCNKNLLNFKNLILEMIKKINS-NSFLKLENI 478 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG--LGAQYGDAVPLSLLRDELAQRL 645 + +N + + + + + Q L D L Q + Sbjct: 479 IDYIDQKVNYSKSINKKKINPENDNLTYIEDLKSFFTKKKDQDKKKTVKQELIDILDQ-I 537 Query: 646 DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 ++ V + T+ ++ + FK+V ++ + + P + Sbjct: 538 SLNNEVKKDNKNKVTLSTIHKIKGLEFKIVFVVYFEENILPLKNNKY------------- 584 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER---FPSVLVQELIDYIGQSHYLP 762 + +++R + A+ A+++L++ + S + + ++ + + Sbjct: 585 NAPLEEERRIAYVAITRAKERLFLLGAYERNIFGHKTINIKESDFFENMKIFLPRKKSIS 644 Query: 763 GDE 765 + Sbjct: 645 ESK 647 >UniRef50_C5NXT8 Putative uncharacterized protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXT8_9BACL Length = 1281 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 126/997 (12%), Positives = 286/997 (28%), Gaps = 163/997 (16%) Query: 34 MILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSW 93 ++L + +M L KFG NID +S + ++ + S + Sbjct: 32 IVLTPEQNSFNFEKM-LCDKFGGTFNIDVMNFSSLTRKLSKQLGMDN--LSRLGDNIKPF 88 Query: 94 KLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGH 153 L ++F L++ L D ++ + + +Y V + L ++ Sbjct: 89 YFYKAAKNLESSDNF-LVKRILQD----VNFIEVVEEIINELKEYKVSI-NVLEEYLEKD 142 Query: 154 LVEGLGEAQAWQAPLW------KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGL 207 + +A L + L E + LY +I+ L Sbjct: 143 TNLDSSHKEKLEAILEIYVEYSRLLREQSSFDKVDYITELLLYLEYID-----------L 191 Query: 208 PSRVF-ICGISALPPVYLQALQALGKHIE-IHLLFTNPCRYYWGDIKDPAYLAKLLTRQR 265 +F + + L + + + + + Y+ L + Sbjct: 192 SDYIFYVDAYYNFTAQEYYYIGKLAEKSKKLIISVISDANRYFN--------FDLAQLVQ 243 Query: 266 RHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASW---GKLGRDYIYLLSDLESSQE 322 + E + S+ + + ++AS K +D + + +E Sbjct: 244 GYELEKMKYNDLYLSDLYSKEKYKLDIFRKSHEIVASMNEIVKSNKDVNFSVVAFVKKEE 303 Query: 323 LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL--DSSITFHVCH 380 ++ DN + + ++LE GV+ + + K D SI Sbjct: 304 INTLKFKIKDNKVE--EYEVLETHRGRFNGVSNDILADKYYKNFTAQYEIDDSIEIMCAK 361 Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 + + EV+ + ++ + + + +I ++ D +Y ++ + D L + Sbjct: 362 NKELEVKQVAREIVKLKHNN--INQNEIAILYRD-STYENYL-----NIFKDYNLDVHLD 413 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV---------------LAARFDI 485 +H +++ L + RF +L LL + L +I Sbjct: 414 KNIETSNHRLVKFIQETLYFDEDRFK-TRLLNLLKTRLTNFENIYRQKAISHVLLGDLNI 472 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNV--------RELELPATGQHTWRFGLTRMLLGYAM 537 E+ L ++E+ I+ N+ + +L + L +L + Sbjct: 473 DEKQLEKDIAELDENMIKDKFLASNLVNNIGGKYKYSDLLEKVRVVSIDDLENILNEKLV 532 Query: 538 ESAQGEWQSVLPYDESSGLIAEL---VGHLASLLMQLNI--WRRGLAQERPLEEWLPVCR 592 + + +L L L+ +++ + L +R +++ + V Sbjct: 533 NMHSDILKDYFIEKTTKYTTEQLEICRQVLLELIDKVSDVSAKNNLQAKRYIKKLVDVFN 592 Query: 593 ----DMLNAFFLPDAETEAAM------TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 M + + + + ++ I + + Sbjct: 593 HCKIKMYLDKEDGEYDNIEELKIDSIDRQVYKKILEYINDINENFGSEKFEYKKFVTLFN 652 Query: 643 QRLDQERISQRFL-AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 L + + + T+ + KVV +LG N V P + D ++ Sbjct: 653 TGLTSIKYRSIPEINNSIIMSTMDLAKVENKKVVFVLGFNKDVLPVSKSSGLIDDKDKER 712 Query: 702 --------KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 + D+ ++ A+ AQ+K YISY E F S + + Sbjct: 713 LISDNIFLSPTKEAALIDEEFVAYIAMTRAQEKTYISYSLLDKSF-KENFASPYLNTVRS 771 Query: 754 YIGQSHYLPGDEALNC---------------------------------DESEARVKAHL 780 + + L + +++ K Sbjct: 772 LFPELEEKQTSKILEFSIADYNYYLENISEIVSTKEFNYLFAKIYRRFMEVKDSKTKEVE 831 Query: 781 TCLHTRMPFDPQNYQPGERQSYA-REWLPAASQA-----GKAHSEFVQPLPFTLPETVPL 834 + + F +SY E L + + ++ + + Sbjct: 832 VLVELMIKFLEHYQLTSVHESYENYEVLDELNDRVFFTNDTSIKNYLSKIIRDYRFQLSS 891 Query: 835 ETLQRFW-------------------AHPVRAFFQMRLQV-NFRTEDSEIPDTEPFILEG 874 E ++ F +P + F + L + R D + T F Sbjct: 892 EYIEEFLEIKKDSFSKFSISKISDFERNPYQFFVKRVLGIEEERDIDIDNLVTGKFFHAV 951 Query: 875 LSRYQINQQLLN----ALVEQDDAERLFRRFRAAGDL 907 +S +I + ++ E + RRF L Sbjct: 952 MSEKRITNFIAECGSKFDIDLIKDEDIARRFNIKEIL 988 >UniRef50_A7VJ43 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VJ43_9CLOT Length = 1247 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 64/515 (12%), Positives = 146/515 (28%), Gaps = 85/515 (16%) Query: 266 RHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ--EL 323 + S + N ++ + + LL++ + I ++ + E Sbjct: 435 KQSIYRFRMARPDLFLNKYNTYSDREDAEDQKILLSNNFRSAGKVIDTINQIFEPLMSEN 494 Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQ 383 +D LH + D + + + + + S+ +P + + Sbjct: 495 LGGIDYDESAKLHIGRQDKNNMGYGSEILIVRNDCADSEKSQPEE-------IRSLTNVD 547 Query: 384 REVEVLHDRLLAMLEEDPTL-------------TPRDIIVMVADIDSYSPFIQAVFGSAP 430 E ++ D + +++ D L + RDI V++ + + F A Sbjct: 548 IEARMIADEIYELVKGDKPLYIPDGDNGETRRVSYRDIAVLMRSVKKNA----KAFEEAF 603 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 A+R +P + + + +L++ D+ + A+L P+ + E+ L Sbjct: 604 AERGIPLFVESESGYFDAIEISTLLDMLAVIDNSHQDYALAAVLRSPL----AGVKEQEL 659 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 + + + L R +Q V Y Sbjct: 660 AEI--------------------VGIYDRDFKDHEKNLAR---------TASFYQKVCYY 690 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 E +E L L L+ W+ E + +F+ ++ Sbjct: 691 AE--KPDSEASEELRQFLRMLDSWKADKNYMSISELLHSILEQTGYYWFVGAMQSGKRRQ 748 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERIS-QRFLAGPVNICTLMPMR 668 + + D L LD S V + T+ + Sbjct: 749 ANIDMLIQKADTYEDSSFRGLFNFLRYMDRLKTNDLDFAEASVLGDDDDSVVMMTMHKSK 808 Query: 669 SIPFKVVCLLGMN------DGVYPRQLAPLGFD----------------LMSQKPKRGDR 706 + F VV + G+ D + P + + + + Sbjct: 809 GLEFPVVFVSGLANRFSNLDALSPVTVNADSYLAGYAIDRKNRAKKKTFARAAMLSVMNA 868 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 + ++ + AL A++KLY++ + Sbjct: 869 EKLAEEIRILYVALSRAKEKLYMTAAVKDPGAEKA 903 >UniRef50_B0S8V9 ATP-dependent DNA helicase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S8V9_LEPBA Length = 664 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 59/492 (11%), Positives = 135/492 (27%), Gaps = 104/492 (21%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD------ILELENR 348 VG+ +G G +L F + P+ + + IL L N Sbjct: 247 VGDDAQCIYGFRGASVHNMLD----------FPKIFPNTNTIQLTKNYRSVQPILNLANA 296 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 + + + P + + S + E E +++L + + +T ++ Sbjct: 297 VLEKSSENYKKNLVSAFPKNSKNP--YLVQLPSLEEEAEWTSNQILELY--EEGITLSEM 352 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V+ + F + + +PY R ++ I+ L + ++ Sbjct: 353 AVLFR-----AGFSSHLLEVQLNSKKIPYRKYGGRRFFDLAHVKDMIAYLKIIENPKDIL 407 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 +L I ++ L + + + +W D+ L LP T + ++ Sbjct: 408 SWNRIL-----LLEDQIGKKYSILLFKKLESNQFQWKDDEHF--FLGLPETTKDSFL--- 457 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 L L ++ ++ L Sbjct: 458 ----------------------------------KLMHCLDSVSPVI------HSTQQIL 477 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 + + + + LS L L+ Sbjct: 478 ERILAYYFPLLESNYDDAEKRKQDLDALVLLSKQ--------EPKLSDYLSNLI--LNPV 527 Query: 649 RISQRFLAGPV-----NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 + + V + T+ + + +K V L + +G P Sbjct: 528 EGKEIGTSNEVEDEFLTLSTIHSAKGLEWKYVFTLQVVEGNLPHSRIRT----------- 576 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 +++R LF A+ A++ L+++ + + N S + +L +L Sbjct: 577 --TDELEEERRLFYVAITRAKEALFLTNPAFNDK-NRFTPVSRFLSDLPKENQLLQFLDP 633 Query: 764 DEALNCDESEAR 775 A + E Sbjct: 634 KNAQSPKEIPKD 645 >UniRef50_B8FXD7 ATP-dependent helicase/nuclease subunit A n=2 Tax=Desulfitobacterium hafniense RepID=ADDA_DESHD Length = 1392 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 52/457 (11%), Positives = 121/457 (26%), Gaps = 50/457 (10%) Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS 373 L E E+ F D L Q E V E + R + D Sbjct: 531 LRTAEGPIEVHLFDPKAIDLSLG--QKRGAEDAATEVDSPAKGEGEEFEQNREPESGDDE 588 Query: 374 ITFHVCHSPQREVEVLHDRLLAM------------LEEDPTLTPRDIIVMVADIDSYSPF 421 + + + E ++ R+ M L + + DI++++ + S + Sbjct: 589 SSLEEAETARIEARLVAARIQKMVLEREFQIHDKELGDYRPVQYADIVILMRSLASVA-- 646 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 +V+ +P ++ +SLL + D+ + A+L P++ Sbjct: 647 --SVYAEEFQKAGIPVYAETNSGYFGTNEVDTVLSLLKIIDNPRLDIPFAAVLRSPLV-- 702 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 + L LR + + + H + + +L + + Sbjct: 703 --GMNGTELGKLRSLLPQGDFYETLVLTFWAGDAHRQEEGHEFYSEIREIL----GKHWE 756 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 Q + E+ + + +L WR + + + D ++ Sbjct: 757 SLPQLEVKVRHILETSPEIKEKVDAFFPKLQEWRHRSRRTSLADLLWHLYEDTGYLAYVG 816 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPV 659 A + Y ++ + + V Sbjct: 817 TLPAGAQRQANLRVLYDRACRYEATNYRGLFRFLRFLEKFQSQGKDLGNASIVGEKENVV 876 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGV------------------YPRQLAPL----GFDLM 697 T+ + + F VV + G+ P + Sbjct: 877 RFITVHSSKGLEFPVVFIAGLGKKFNTRSLSSQLLLHSHLGVGIPLIDIENQVRYPSVIQ 936 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 +R + ++ + AL +++L++ Sbjct: 937 YAVKERLWQEALAEELRILYVALTRGKERLFLFGHQH 973 >UniRef50_Q5HY14 DNA helicase II UvrD n=2 Tax=Gluconobacter oxydans RepID=Q5HY14_GLUOX Length = 682 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 55/509 (10%), Positives = 134/509 (26%), Gaps = 98/509 (19%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDS-ENAGQLFNSDGEQDVGNPLLASWGKLGRD 309 ++D Y R ++ + + + VG+ + +G G Sbjct: 230 LRDERYRRDWADRFDCVLADEFQDVNRLQFLWLKCLSKDHNELFVVGDDAQSIYGWRG-- 287 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL---ELENRAVAGVNIEEFSRSDNKRP 366 + + + +F+ P + ++ + + + A A ++ + Sbjct: 288 --------ANVRIIRSFLKEFPTGRMIALEQNFRSTGHILSAANAVISHDTSRLEKTLYT 339 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 + Q E + + + D+ V+ + + Sbjct: 340 ASGDGEPVDILRHTGSQDEASGIAAEIGRR--ALEGVPYEDMAVLYR-----FNHLSRLL 392 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF---VSEDVLALLDVPVLAARF 483 + +PY + + A V++ ++ L L + E +++ P Sbjct: 393 EESLLRARIPYELVNDTAFWQRGVVKDALAFLRLTCFPYERQSDEAFRRIVNQPA----R 448 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 I + + Q +E I + R Sbjct: 449 GIGAKAMATFEQVADEEAI--------------------SLYEAAER------------- 475 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 G + L L + + + E L E L V + + + Sbjct: 476 --------TVQGRTGKAADKLRGFLDVI--LKGARSDEPSLGERLRVLVEE-SGYLAMHH 524 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 + +++ S + + G V + T Sbjct: 525 AAGEDGRTALENLHELLSLANE--------FSSVEELFDHAALGSESRDDDSVGRVKLMT 576 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISA 723 + + + F V L+G D ++P + ++R L AL Sbjct: 577 IHGSKGLEFGHVFLIGWEDTLFPSRTNIDP----------------AEERRLAYVALTRG 620 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQELI 752 +Q++ +S+ + PS + E+ Sbjct: 621 RQRVSVSWCEFR--RGEQANPSCFIDEIP 647 >UniRef50_C3LBP3 ATP-dependent DNA helicase, UvrD/REP family n=82 Tax=Bacillus RepID=C3LBP3_BACAC Length = 688 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 55/511 (10%), Positives = 144/511 (28%), Gaps = 71/511 (13%) Query: 257 LAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLS 315 L +L R ++ + + E L + G+ A +G G + +LS Sbjct: 244 LTQLQQRFHYIEVDEFQDTSYAQYEIVKLLASPRNNLFIAGDDDQAIYGWRGASHQIILS 303 Query: 316 ---DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS 372 + +++ + + + + + +++++L P Sbjct: 304 FPKEFDNTTIIALNTNYRSNPFIVGLGNEVIKLNQERFDKELYSVREEGVQPFYARP--- 360 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 + E + + ++ +D ++ + Sbjct: 361 -------ATTLDEANQILQLIQEKVDSGE-RNYKDFCLLYRTHSVSRSLL-----DQLTI 407 Query: 433 RYLPYAISDRR-ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +P+ + H +++ + L L F E + +L I + Sbjct: 408 HKIPFIKHGASQSFYEHSLIKPVLDHLRLVIEPFRLESLSNIL------PTMYIGRDD-- 459 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 + + W++G R +L Sbjct: 460 -----------------------CISFIEREQWKYGEGRF---------PSLLHFLLLNP 487 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + V + + + L ++ L+E + L D + Sbjct: 488 SLKPFQVKKVNERIDFI----KFIKELEPKKALKEIIHGKGKYLEYLQSNDRSSFTMHKD 543 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 I+++ + E L + + + + + E + V++ ++ + + Sbjct: 544 IQEEMLEELMESANRFTDIPAYLQFIDEAIQGQKEMEALKTMPQKDAVSLMSIHNAKGLE 603 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F V LLG +DG+ P + + +++R L A+ A+++LYIS Sbjct: 604 FPCVFLLGASDGILPHTSSLKD----ANDRVTETSEALEEERRLLYVAITRAKEELYISS 659 Query: 732 IGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 + S + + + + Sbjct: 660 PQ--FFRGKKLDISRFLYTVRKDLPEKTSTK 688 >UniRef50_Q6KHF3 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mobile RepID=Q6KHF3_MYCMO Length = 742 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 60/460 (13%), Positives = 146/460 (31%), Gaps = 58/460 (12%) Query: 326 FVDVTPDNLLHNIQSD------ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVC 379 F + P+ + ++ + I+E N + N S + + I + Sbjct: 286 FHEDFPNVQIFHLNKNYRSNKSIIEAVNNLMKKNNTSFESSIKEMEAQNLEEEKIVYQQA 345 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 S E + ++ + + + +DI + F F + + I Sbjct: 346 FSTDAEARWVVHKINKL--KRNKVQLKDIAIFYRS-----SFYTKSFEDELEKAEINFQI 398 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 D ++ IS L + S L +L+VP D++ + L ++ Sbjct: 399 LDDNKFYERDEIKDCISFLRVLHDG-SSTTFLRILNVP----NRDVSVTFEKKLLEYAES 453 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 ++ + + + L ++ + Sbjct: 454 RN-----------------------ENIYDALINLFKDTKKEVTSKMKLQWNTKNKT--- 487 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM-LNAFFLPDAETEAAMTLIEQQWQA 618 ++ +L +L+ +R L + + ++ + D I + + Sbjct: 488 ILLNLVNLINSFRKYRNALKKYPIYKSLHGFLEEVKYYDYLKDDDAGSDKEKNILELLNS 547 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 I + L+ +E+ L + V++ + + + FK V ++ Sbjct: 548 IK---IWENANRNKNLADYLEEI--SLISSKYKSPLSKNSVSLISAIHSKGTQFKNVFIV 602 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG--RSI 736 G+++ ++P + + + K G D++R LF AL A ++++S + Sbjct: 603 GLSEYIWPNIKS------IEELEKTGSSDLIDNERRLFYIALTRAVDRIFLSDSQGFFNS 656 Query: 737 QDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 ++ PS + E+ + Q + ESE + Sbjct: 657 DLKYKKSPSRFLNEIGIDLQQFTSNLSVDPNVNQESELEI 696 >UniRef50_UPI000185BEF4 helicase, uvrd/rep family n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BEF4 Length = 1119 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 82/795 (10%), Positives = 200/795 (25%), Gaps = 121/795 (15%) Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG 307 WG A+ L+ + + + + + N L GK Sbjct: 264 WGKSVVLVDDAEHLSPEAARLVDRFVSQAAVAVITGDEDQSVFHFRGANNDYLRGTGKAE 323 Query: 308 RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 I+L + ++ + L + E S S+ Sbjct: 324 YKAIHLQQSYRCNADIADLANAVSQRLPKAPAYRGIAGSVGTQEARESEVGSNSETAAAE 383 Query: 368 D--PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV 425 D S++ + S + + + D + D + +D+ V+V ++ Sbjct: 384 DSYAAKSAVKIAIHPSERAQRATVADYFRRL-HIDEGVAWKDMAVIVRSGAG-----ESS 437 Query: 426 FGSAPADRYLPYAIS-DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 A + +P I ++ A + L ++ + L P++ + Sbjct: 438 LFRALSRAGVPVQIDPTDIVLSHQRLVRALMVALRATMNQLDDVEWDEFLSGPLV----N 493 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 + L + + ++ + G L+G Sbjct: 494 MDPIVKERLLRGIRKADLFGGAAMTQ---------------------LIGILKADGL--- 529 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP-----VCRDMLNAFF 599 + + L L L L+ R L W + ++ A Sbjct: 530 -ATEQLELIESLSQRERQALQVPLDLLSAAREALRDGVEATLWAIWQSTGLADHLVAASL 588 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR--LDQERISQRFLAG 657 +A ++ G + + + + ++ R Sbjct: 589 RGGTAGASADRDLDAVMALFDFAGDRVELNPKLTVDGFIASVEEQELPIGARDRSGVERD 648 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYP------RQLAPLGFDLMSQKPKR------GD 705 V I + +K V ++G+ +G +P + F + Sbjct: 649 AVRILSAHAALGRQWKAVAVVGVQEGQWPSLGVTGSVMKQNEFIGLVDHGIEPREYINSM 708 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD- 764 ++R L A+ A ++ ++ + PS + EL++ +G S Sbjct: 709 ADALAEERRLLHVAVSRASDRVLLTAVDSPDDVG---VPSPFIIELVEKLGNSATELAKQ 765 Query: 765 -------------------------EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER 799 EA + + + L+ E Sbjct: 766 SEASSAANGVGATANEANVGKPDVAEAEDVAWAGEGLPRVLSVESLLAELRAAVVDDAET 825 Query: 800 QSYAREWLPAASQ--------------AGKAHSEFVQPLPFTLPETVPLETLQRFWAHPV 845 ++ R+ ++ G +P+ P + ++ P+ Sbjct: 826 ETRRRQAARQLARLAQVEVAGAHPDTWWGLRAPSTSKPVNDKKPMRINPSKVEATLNCPL 885 Query: 846 RAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL---FRRFR 902 +A + + + Q + A+ + RR Sbjct: 886 KAML-----------------DKSAPTSAMYLGSLLHQAVEAVAKGVTVPEAQSEIRRVF 928 Query: 903 AAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC-NGVQITGWLPQVQP 961 ET ++ + + G + + + + + I G + ++ Sbjct: 929 GDLSDDPEWRKRTEEETWLTGLEDWQRWIETKKDIGTEVPVKVNINDDIVIVGRIDRLIE 988 Query: 962 DGLLRWRPSLLSVAQ 976 D + + + Sbjct: 989 DADGAVQIVDIKTGK 1003 >UniRef50_C7HSP4 Putative uncharacterized protein n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HSP4_9FIRM Length = 1119 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 74/605 (12%), Positives = 179/605 (29%), Gaps = 85/605 (14%) Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 LE EN + ++ E N + +I S E+E + ++ Sbjct: 265 LEKENELLDIKHLYENFEKYNPQIYQEKTENINLVESISSTNEIENSSLIIEKLIR--EG 322 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 +I +++A+ D Y ++ +F +P + + + +L+ ++S++ L Sbjct: 323 HRYSEISLVLANSDEYENLVKRIFAR----SEIPIFVDKTKKLSDNHILKTWLSMIRLVV 378 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYL---RQWVNESGIRWGIDDDNVRELELPAT 519 F D+ A + V+ D E + + ++ I+ + D+ + Sbjct: 379 FNFRKTDLEAFIRSNVI----DFGENAYERILDFQNYIENRKIKGAMIFDDKYFVLDEKF 434 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 ++ + + + S + +L + + E + L+ ++ Sbjct: 435 YENDEKLKKEKEDELKNVNSIRKILFDLLY--DLYKIRNEKIKA-NDLVKEIYKSFDKKI 491 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 + + R+ F + ++ + + L + Sbjct: 492 IKSGFNHYQENIRENRLEIF-------EENKQVWDKFLTNLEQIATILSDSPTKLKKIYK 544 Query: 640 ELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA-------- 690 + I A V + R K+ +GM D +P Sbjct: 545 LIENSCKATSIGIIPPAIDQVLVGDFSRDRINDRKIKIFVGMTDIYFPGNNNSEMLISEN 604 Query: 691 ------PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 G DL K K+ D+ + L S QK+ SY + ++N Sbjct: 605 EKTALENEGIDLKIYKEKKDDKIILN-----LLRMFTS-SQKIIFSYSLIN-KENDPMNR 657 Query: 745 SVLVQELIDYIGQSHYLPGDEA-------------LNCDESEARVKAHLTCLHTRMPFDP 791 + + ++I+ Y ++ L + +K + F Sbjct: 658 ATSISDIINIFPNISYKKIAQSKFDFIKYSTDLLDLKAFQILWNIKNKEDTKKSEKEFVK 717 Query: 792 QNYQPGERQSYAREWLPAASQA----GKAHSEFVQPLPFTLPETV------PLETLQRFW 841 + + + +S G +S L + + + + ++ + Sbjct: 718 SYLKFKKDNIENYNYSKNSSYDLFLKGFTYSNDKNLLTPEISKKLYDKNKFSVSEIETYA 777 Query: 842 AHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ--------QLLNALVEQDD 893 P + F L+ ++ L I +L++ +++ D Sbjct: 778 KCPYKYFINYGLRAKENK---------NLDVDNLEIGNIVHYNMENISKKLIDMDLKEVD 828 Query: 894 AERLF 898 E+L Sbjct: 829 DEKLE 833 >UniRef50_Q9RNX7 RecC1001 (Fragment) n=71 Tax=Bacteria RepID=Q9RNX7_ECOLX Length = 200 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 196/201 (97%), Positives = 198/201 (98%), Gaps = 1/201 (0%) Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ Sbjct: 1 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 60 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD+ +S RFLAGPVNICTLMPMRSIPFKV Sbjct: 61 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDK-NVSARFLAGPVNICTLMPMRSIPFKV 119 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR Sbjct: 120 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 179 Query: 735 SIQDNSERFPSVLVQELIDYI 755 SIQDNSERFPSVLVQELIDYI Sbjct: 180 SIQDNSERFPSVLVQELIDYI 200 >UniRef50_Q2S575 ATP-dependent DNA helicase n=2 Tax=Rhodothermaceae RepID=Q2S575_SALRD Length = 712 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 59/531 (11%), Positives = 145/531 (27%), Gaps = 88/531 (16%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR 308 D ++ + L + + N D + G R Sbjct: 228 DDDVRHQVASRCRHVLVDEYQDTNALQAELVKKFSSVHGNVTVVGDDAQSIYKFRGADFR 287 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 + + + ++ + + + ++ + ++E R+ E + + + Sbjct: 288 NIFRFPDEFDDTEVVKLEHNYRSTQPILDLANRVIEQAERSYDKTLFTEKTEGELPALVP 347 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 D + E + + +L + + + D+ V+ Sbjct: 348 AADGDM----------EARFVAEMVLRL--REDGVPLSDVAVLFRS-----SHNAYDLEV 390 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 R +P+ ++ ++ L + ++ + L I + Sbjct: 391 ELNQRNIPFVKYGGMKLNEAAHIKDVLAHLKVVENPQDAASWNRAL-----QLIHGIGPK 445 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + L +W E+ + L Sbjct: 446 TAQSLIEWTTEAA-------------------------------------------EDPL 462 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWR-RGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + + L L L R + +E L + + + D Sbjct: 463 TLGDGAPFSDRYAARLKQLFSTLRHVRSDDTSVTEQVEAILDYYQPLFENKYADDH--PK 520 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 +E ++ ++ L + EL + + + T+ Sbjct: 521 RAPDLEHLAGLAANHESRQRFLSSLTLDPI--ELTALDQETGEDDEPP---LVLSTIHSA 575 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F V L+ DG P + A + D++ LF A+ A++ L Sbjct: 576 KGLEFHTVFLIRALDGTIPSRHA------------LREPGGVDEELRLFYVAVTRAEEGL 623 Query: 728 YISYIGRSIQDNSE---RFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 +ISY + PS V++L D + + L ++A++ + +A Sbjct: 624 FISYPMTQYRRGQGEYMTTPSRFVEDLPDDVLEPVQLVEEDAVDENAPDAP 674 >UniRef50_C6WM78 UvrD/REP helicase n=4 Tax=Actinomycetales RepID=C6WM78_ACTMD Length = 1349 Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 105/761 (13%), Positives = 202/761 (26%), Gaps = 103/761 (13%) Query: 125 FQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEA-----QAWQAPLWKALVEYTHQL 179 +QL+ + ++ W + + + L + LVE QL Sbjct: 163 WQLAHRV--------------VSAWTQDLDTDKIPTTITSYLLSLAGELGEHLVE-PEQL 207 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPS-----RVFICGISALPPVYLQALQALGKHI 234 H L + + P L R+ + + L A +A + Sbjct: 208 LAHAEHLCALIEHAPKAPRQKDALPEKLQEIVDAQRLRVALLP-----LLDAYRARKRRD 262 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRE---LPLFRDSENAGQLFNSDG 291 + P + R ++ + + Sbjct: 263 AVLDFADQMSLAARLATGHPEVVEGERERYGAVLLDEYQDTGHAQRVLLRALFGDGDPMP 322 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS--DILELENRA 349 VG+P A +G G L + + F LL + ++ ++L L N Sbjct: 323 VTSVGDPAQAIYGWRGASAANL------PRFREDFPPADKYELLTSFRNPPEVLHLANAV 376 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE--DPTLTPRD 407 + + + + + + E+E L D + D + P Sbjct: 377 SGPLRAAGLDVAPLRHREGVEPGDVRIGLFPDVRAELEWLADTVAEQWRAHVDTSDEPPT 436 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 V+V P I AV DR LP + P + S L + Sbjct: 437 AAVLVRRRSD-MPAIAAV----LRDRGLPVEVVGLGGLLDEPEVRDLTSALRVLVDPLAG 491 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 LL + + + + R D+D + L G+H+ + G Sbjct: 492 TAATRLL-TGSRWRIAAFDLAAMWQRARDLAGAPARKSPDEDPLSVLADALPGEHSEQAG 550 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP--LE 585 L ++ + S AE + L +L RR L Q P + Sbjct: 551 LA---------------DALDDPGDPSAYSAEGYRRIRRLGAELAALRRRLTQPLPELVA 595 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 + + A P A + A A + + L Sbjct: 596 DVERTLLLDIEAVARPGGVGRAHLDAFADVVSDFAAASPAATLPALLDYLRTAEHAEDGL 655 Query: 646 DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF----------- 694 + V + T+ + + +++V + + V+P + + Sbjct: 656 APGEVEVV--DNRVQLVTMHSAKGLEWRIVAVPHVVKDVFPGRRKSASWLKSVTELPAAL 713 Query: 695 -----DLMSQKPKRGDRSRRDDDR--YLF---------------LEALISAQQKLYISYI 732 DL + G + ++ AL ++ L +S Sbjct: 714 RGDAQDLPELRVPGGANRKEVEEALDRHADEFEERRLVEERRLLYVALTRSEHSLLVSGH 773 Query: 733 GRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM--PFD 790 + + PS + EL + + + + P D A + L P D Sbjct: 774 WWGETGATPKGPSAFLTELREVVTTAEHPPADVAHWAPAPGPEDENPLAAKAKTAQWPAD 833 Query: 791 PQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET 831 P + + A + A + +A P E Sbjct: 834 PLGSRRDAVSAGAAMVVAALDRLREAAEHEPPGEPDEPDEP 874 Score = 62.9 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 39/290 (13%), Positives = 73/290 (25%), Gaps = 39/290 (13%) Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW------ 806 D S A + V A +P DP+ P + + + Sbjct: 1066 DLPEGSPAADPIPAAPVVPAADLVPADPVPAEPVLPTDPEIVLPTDPEISDPDAADPEGW 1125 Query: 807 -LPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 + + + LPE + + L P + RL+ + + Sbjct: 1126 ARDVDVLLAERAAAMDRRERVLLPEHLSVSQLVELATDPDQ--LARRLRRPLPFPPNPLA 1183 Query: 866 DTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 L R +LL A+ +P G G + Sbjct: 1184 RRGTAFHTWLERRFGAVRLLELDELPGAADE--------DAVPDGELGRLQE-------A 1228 Query: 926 QLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL----- 980 LA + + +G+ + G + V D W + + Sbjct: 1229 FLASAWADRTPHAVEVPFEAEVDGLAVRGRMDAVFADPDGGWTVVDWKTGRVPEADRVPS 1288 Query: 981 -----WLEHLVYCASGGNG-----ESRLFLRKDGEWRFPPLAAEQALHYL 1020 L + + G+ + ++R D R L + L L Sbjct: 1289 LSVQLAAYRLAWASLSGSPVELVRAAFHYVRDDRTLRPADLLDAEGLRAL 1338 >UniRef50_D1XU37 UvrD/REP helicase n=3 Tax=Actinomycetales RepID=D1XU37_9ACTO Length = 1164 Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 90/532 (16%), Positives = 151/532 (28%), Gaps = 54/532 (10%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS--DILELEN-RAVA 351 VG+P A +G G L D T +L N +S +L L N A Sbjct: 311 VGDPCQAIYGWRGASVAN-LDDFPQHFPHADGTPATRYSLSENRRSGGRLLHLANGLADP 369 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + E + P D ++ + + E++ L D L ++ P +I V+ Sbjct: 370 LRAMHEGVEALRPAPGAERDGTVRCALLRTHAEEIDWLGDSLAHLVRT--GTPPGEIAVL 427 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 + P IQA A DR +P + P + +++ + + ++ Sbjct: 428 CRTAGDF-PRIQA----ALVDRDVPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLV 482 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 LL P R+ I L L + DDD + L G+ Sbjct: 483 RLLTGP----RWRIGPRDLALLGRRARLLVHHASPDDDTDPDRRLAEA-----VEGVDPA 533 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 + ++ S D+ AE A L +L RR L PL + L Sbjct: 534 EVISLADALDTFLDSGGHQDDQLPFSAEARIRYARLATELRELRRSL--ADPLMDVLHRV 591 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIA-EGLGAQYGDAVPLSLLRDELAQRLDQERI 650 A A + + A L L E+ Sbjct: 592 LSTTGLEVELSASPHALAARRRETLANFLDVAAGFAAVDGEATLLAFLGFLRTAAQYEKG 651 Query: 651 SQRFLAGP---VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 L G V + T + + + VV + G+ G +P + + S+ R Sbjct: 652 LDNALPGGENTVKVLTAHKSKGLEWDVVAVPGLVTGQFPSTRSREAWTAQSKVLPHALRG 711 Query: 708 RRD--------------------------DDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 ++ L ++ L S Sbjct: 712 DAATLPDVCSWDAKGLKAFKDEMTAHQHTEELRLGYVTFTRPRRLLLGSGHWWGPSQKKP 771 Query: 742 RFPSVLVQELIDYIGQSHYLPG--DEALNCDESEARVKAHLTCLHTRMPFDP 791 R PS + L D+ H + DE ++ +P D Sbjct: 772 RGPSAFLDALYDHCAAGHGEIEVWADEPGPDEENPVLREREAEQAWPLPLDE 823 Score = 59.4 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 70/266 (26%), Gaps = 27/266 (10%) Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 ++ R+P DP + P E ++ A + AG+ + Sbjct: 907 PIRADRAPGRVPHLPAARVPSDPPDLTPEEARTLASWDRDLDALAGELRRARATVHDVVV 966 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 P ++ L P F + + R R + + Sbjct: 967 PASLSATQLLHLADDP-DGFARELARPMPRPPQP-----------AARRGTRFHAWVESR 1014 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFG-EIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC 947 E+ L GD E + ++ + Sbjct: 1015 FEELPLPMLGPDELPGGDDGDAEIADERDLAELKEAFER--TEYARRTPYRVETPFQIVL 1072 Query: 948 NGVQITGWLPQVQPDGL----LRWRPSLLSVAQGMQLWLEHLVYC-----ASGGNGESRL 998 G I G + V G + W+ + A +QL + L + A G + L Sbjct: 1073 AGRVIRGRIDAVYRTGDTYEIVDWKTARHRTADPLQLAVYRLAWAELHGLAPEAVGATFL 1132 Query: 999 FLRKDGEWRFPPLAAEQALHYLSQLI 1024 ++R R L L +L+ Sbjct: 1133 YVRTGETVRPTGLPG---RAELERLL 1155 >UniRef50_C6HZQ0 UvrD/REP helicase n=3 Tax=Leptospirillum RepID=C6HZQ0_9BACT Length = 647 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 80/579 (13%), Positives = 164/579 (28%), Gaps = 99/579 (17%) Query: 200 ATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTN-----PCRYYWGDIKDP 254 LP I G +L L L A+ + L R Y + Sbjct: 130 GEDPGEELPPAAAIAGYLSLSANLLLPLPAVIRRRAPWLGHLEKTIEAIARRYREEKAAQ 189 Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA-SWGKLGRDYIYL 313 L + + + D QD NPL L + L Sbjct: 190 RVLDFDDLLVLWLRLLEESPETAELLRDRFRHVLVDEYQDT-NPLQGKILDLLVASHKNL 248 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQ-----------------SDILELENRAVAGVNIE 356 + SQ + +F DN+L + +IL + NR + + + Sbjct: 249 FVVGDDSQSIYSFRGAAIDNILSFQERYPEAGVYRLEKNYRSTPNILSVANRIIEQNSRQ 308 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + P T +S Q + + R+ L D P +I V+ Sbjct: 309 IPKTLYSPLPEADHP---TLVRMYSDQDQARYITTRIRRAL--DRGQEPSEIAVLYR--- 360 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + ++ + + +P+ ++ ++ +S L L ++ + +L Sbjct: 361 --AHYVSLSLQLSLSRAGIPFHLTSGLKFFEQAHIKDILSWLRLLENDRDAMAWRRILR- 417 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 + + + ++ + + + L PA + Sbjct: 418 ----MVPRVGRKTAEKIEALLSRA-------EAPRKALGDPAFLK--------------- 451 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 + IA + + L RR ++ + + Sbjct: 452 -----------AAPASARPGIAGIAERFSQLAE-----RREKNPRDVMDLVGTILATGYH 495 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERISQRFL 655 + E + + I++ L+ ELA E +SQ Sbjct: 496 DYLYETFEDPESRE------EDILSFAAQI--PPETDLADFMAELALLEAGGEELSQEEQ 547 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 V + T+ + + + V LL + +GV+P + + + ++ R L Sbjct: 548 KNRVVLSTVHQAKGLEWDTVYLLSLAEGVFPSSRSAETDEEIEEE------------RRL 595 Query: 716 FLEALISAQQKLYISYIGRSIQD-NSERFPSVLVQELID 753 F A+ A+ L + + S PS + E+ + Sbjct: 596 FYVAVTRARHDLVLCVPQVVGRGFGSPAPPSRFLGEIGE 634 >UniRef50_C0WBY1 Predicted protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WBY1_9FIRM Length = 1037 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 82/752 (10%), Positives = 210/752 (27%), Gaps = 106/752 (14%) Query: 266 RHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDA 325 + + + P + + L+ + GK L D +A Sbjct: 203 DAALDVLQDPGAILPWEKLYFSEFNELTGLQMALVKALGKRVSISFGLFYDESRPDLSEA 262 Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQRE 385 + D LL + I+ + + I S E Sbjct: 263 TRKLEED-LLGDGYEKIIAPKKVSRPEDLAYFAETFPKATGDAVAAQHIYLGEASSVDSE 321 Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 ++++ + L+ + P +I+++V +++ Y G + L ++D Sbjct: 322 IKMVLTDVKKKLKS--GVAPHEILLLVRNLNDYQGL-----GRYMEEYGLLSTLADVTDL 374 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 P+ L ++ + +LAL+ ++ F + + +L Sbjct: 375 AGQPLPLFLTKLWEAALTKDDTMPLLALMKTTLMQELFHVDRIAVGHL------------ 422 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 + + T F L R+ + + ++++ + Sbjct: 423 ----------VEESYIETPGFLLERISHLSGVSDLKPLFEAL-----------QTPKTCT 461 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 L+ R + L+ A++E + + +A+ Sbjct: 462 QWRDYLDERLTEWDLVRTFGRLHQEGKVTLSE-VKIMAQSEDFVRAFFDRLEALFEAVGS 520 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFL-AGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 +V L + + L I+ + + ++ +P+ V +LG+ DG+ Sbjct: 521 --KDLSVGLGDIFSYWKEALIGTTITLTPSHEEGIRVMEASDIQGVPYPYVYILGVRDGL 578 Query: 685 YPRQLAPLGFDLMSQKPKRGDRS--------RRDDDRYLFLEALISAQQKLYISYIGRSI 736 +P ++ + R DR+ F A+ A++++++S+ Sbjct: 579 FPAISRESWLYSDEERTELAALDIPLGTSARRLARDRFFFASAVSLAEKEVHLSWFADDE 638 Query: 737 QDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP 796 S ++ L + AL + V + Sbjct: 639 GG-----ASYYIERLRHFF-------TPHALPFVTYHSDVHDCYSEPQMVRYLMEAENLG 686 Query: 797 GERQSYAREWLPA---ASQAGKAHSEFVQPL------PFTLPETVPLETLQRFWAHPVRA 847 + +Y + + A + + + L P + L F P Sbjct: 687 EKEATYLADHVDAKILLRAQDEKNRFAPKSLYNGYLGPQEETLHLSASQLDGFLTCPFMY 746 Query: 848 FFQMRLQVNFRTEDSEIPDT---EPFILEGLSRY-------QINQQLLNALVEQDDA--E 895 F +++ + + P I LSR+ + + L L ++ + Sbjct: 747 LFTHVWKLDVKEAKTAFPTPDVVGNLIHLTLSRFMGRHLGEALFTKELEMLWQELSEAYQ 806 Query: 896 RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD--------------------RVIACR 935 + GD+P + + ++ + +++ Sbjct: 807 AAYTEMERNGDIPRSRYSDHIRKSYEEWLKRWLRMEVDYEEKSPTGVTVCAVEKAFGRKG 866 Query: 936 QPGQSMEIDLACNGVQITGWLPQVQPDGLLRW 967 ++ + V ++G + ++ Sbjct: 867 AAWPPYDLTVDGKKVYLSGQIDRIDRSESGYL 898 >UniRef50_A7HKZ3 UvrD/REP helicase n=4 Tax=Thermotogaceae RepID=A7HKZ3_FERNB Length = 656 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 63/560 (11%), Positives = 162/560 (28%), Gaps = 96/560 (17%) Query: 217 SALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL 276 + L P + ++ + I++ + + Y + + L + + L Sbjct: 173 TFLTPYEV-VIKRAKRWIQVVDVIEKVFQEYALEKERQNVLDYDDLLLKTLQMLEGNEEL 231 Query: 277 FRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV-TPDNLL 335 R + + D QD L L + L + +Q + +F + Sbjct: 232 RRRISSRFKWILVDEFQDTNILQLKIVQHLSEVHGNLFVVADDAQSIYSFRGARFENVKE 291 Query: 336 HNIQSDILELENRAVAGVNIEEFSRS-DNKRPLDPLDSSIT-------FHVCHSPQREVE 387 +++ +++ + I E S + + +I + E Sbjct: 292 VMDGANVFKIQTNYRSTDKIVELVNSMIPRNSVPKKLRAIRTSVQKPIVVNTYDHFDEAY 351 Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 + R+ ++ D DI V+ + R +P+ + Sbjct: 352 FVAQRINEIV--DEGFDYSDIAVLYR-----AHAHSLELQLELTKRNIPFKVLSGLRFTE 404 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG-LRYLRQWVNESGIRWGI 506 ++ ++ L + + + + +L ++ ++T E + + NE + Sbjct: 405 TAHVKDVVAFLKILLNPYDVISWMRVLK--LVDNVGNVTAEKIISRITSESNEEKSPLDL 462 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 + + + + + + +Q +L Y Sbjct: 463 FLEMKIKSSNVENLKSAIFNSIDKAPSFQIKNFYEQFYQDILEYH--------------- 507 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 + +E +E + + + +E I+ Sbjct: 508 -------YTDFRDREEDIERLIEM---------------ASYYDNVEDFLNDIL------ 539 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 E G V + T+ + + +KVV ++G+N G +P Sbjct: 540 -------------ISEDVRTNESNDFSDDKGKVTLTTIHQAKGLEWKVVFVIGVNPGDFP 586 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD------NS 740 F + + D++ LF A+ A+ LYI++ ++ NS Sbjct: 587 H------FLALKD-------NTLDEEERLFYVAITRAKDILYITHSTLPRREYFYNSFNS 633 Query: 741 ERFPSV-LVQELIDYIGQSH 759 ++ V+++ + + Sbjct: 634 DKQIDRDFVKDIPRDLAEFW 653 >UniRef50_A5HYY0 ATP-dependent helicase/nuclease subunit A n=11 Tax=Clostridia RepID=ADDA_CLOBH Length = 1279 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 47/391 (12%), Positives = 118/391 (30%), Gaps = 66/391 (16%) Query: 380 HSPQREVEVLHDRLLAMLEED---------------PTLTPRDIIVMVADIDSYSPFIQA 424 + Q E ++ ++ ++ + L RDI++++ +++P Sbjct: 572 DNIQLEGRLVAKKIQKLVGNNLEGGLKVFDKKLGEYRNLQYRDIVILMRATSNWAP---- 627 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 +F A +P ++ ISLL + D+ +L++L P+ Sbjct: 628 IFVEELAKEGIPVFADTNSGYFDTAEIKTMISLLQIIDNPLQDIPLLSVLRSPI----AS 683 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 T++ L +R ++ +++ +E Sbjct: 684 FTDDELIDIRMVNKNITFYECMEIIYRLYKNEKLDSYYSFY-----------IEDENKIN 732 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR-DMLNAFFLPDA 603 + + +E +L + S + +L +WR + ++E++ + + Sbjct: 733 KIIKDMNE------KLKNKICSFIEKLKLWREK-SIHIDIDEFIWFLYVETGYYGYAGAL 785 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL--AQRLDQERISQRFLAGPVNI 661 + + + Y ++L + V I Sbjct: 786 QAGEQRQANLRILFQRAKQYAKTSYKGLFNFINFINKLKFSSGDMGSAKILGENENVVRI 845 Query: 662 CTLMPMRSIPFKVVCLLG---------MNDGVYPRQLAPLGFDLMSQKPKRGDR------ 706 ++ + + F VV L G +N + + G D + + + Sbjct: 846 MSIHKSKGLEFPVVILSGTGKNFNMTDLNKNILFHRDLGYGPDYVDTERRIAYPSLVKNI 905 Query: 707 -------SRRDDDRYLFLEALISAQQKLYIS 730 ++ + AL A++KL I+ Sbjct: 906 IKNKIRLETLSEEMRILYVALTRAREKLIIT 936 >UniRef50_B2IL96 UvrD/REP helicase n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IL96_BEII9 Length = 730 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 63/543 (11%), Positives = 129/543 (23%), Gaps = 102/543 (18%) Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 L P R D A+ ++D + F VG+ Sbjct: 272 LLLWPTRALLRDAAYRTRWARRFDCILADEYQDVNYAQY--QWLRALAFEHHRIFCVGDD 329 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL-ENRAVAGVNIEE 357 A +G G D Y + F P + ++ + A A I Sbjct: 330 DQAIYGWRGADITY----------IRRFTQDFPQASVIRLEENFRSTGAILASANAVIAR 379 Query: 358 FSRSDNKRPL--DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 K I E + + + + ++ ++ + Sbjct: 380 DPHRLGKTLFTNKGYGQPIEVVAYRYCDGEAHGIVEEIKKRHA--EGVDFAEMAILYRN- 436 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV---SEDVLA 472 F F +PY I ++ ++ L + + E + Sbjct: 437 ----NFFSRGFEECLVRAKIPYVIVGDVGFYQRAEIKDTLAFLRIATTPDDRQSDEALRR 492 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 +++ P R ++ + L + N A T + Sbjct: 493 VINEP----RRGFGKKAMAILEEEAN-----------FRHLSLFRAIETATLSSACRKAG 537 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 L + + L + L+ + G +R L + Sbjct: 538 LMFVAAIEKVAKDPSLTLADQLSLLLDATG-----------YRAMLQASK---------- 576 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 + ++ + L Sbjct: 577 -------------AEDGKARLENISELLHLAG--------SFHDAHELLDHAALASSRPN 615 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 G + + TL + + F+ V L G DG++P + D++ Sbjct: 616 ENEEGRLKLMTLHKSKGLEFEHVFLPGWEDGIFPAGNSD-----------------LDEE 658 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 R L A+ A+++ I+Y PS + ++ +L D Sbjct: 659 RRLAYVAITRAKRRAAITYCEYRRG---LADPSSFIADIPPQHRIEGWLRDDGLPPVQRE 715 Query: 773 EAR 775 Sbjct: 716 RKA 718 >UniRef50_Q18AN9 ATP-dependent helicase/nuclease subunit A n=7 Tax=Clostridium difficile RepID=ADDA_CLOD6 Length = 1275 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 66/493 (13%), Positives = 143/493 (29%), Gaps = 82/493 (16%) Query: 380 HSPQREVEVLHDRLLAMLEEDP-------------TLTP---RDIIVMVADIDSYSPFIQ 423 + Q E ++ + + +++ + P RDI++++ +++P Sbjct: 568 DNIQLEARMVGNIIKDLMKVNEDGKIQKVYDKGIDGYRPVEFRDIVILLRATSAWAP--- 624 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 VF + +P ++ +SLL + D+ ++++L P+ F Sbjct: 625 -VFADELMNMDIPTYADVGVGYFDTIEIKTILSLLQIIDNPMQDIPLISVLKSPI----F 679 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 T E L +R + + + + ++ F Sbjct: 680 GFTPEDLIDIRVQSKDKIFYEVLKSTAEYDGFTDSQNENESEFI---------------- 723 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLP 601 E + L++L ++ + +E++ R A+ Sbjct: 724 ------------PSEECINKSKDFLIKLKEFKEK-SMYMSTDEFIWYLYTRTGYYAYVGA 770 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ--ERISQRFLAGPV 659 + + + ++L + + A V Sbjct: 771 LPGGSQRQANL-KVLFERAKQFEETSLKGIFNFVNFIEKLKKSSSDMGSAKTLGENANVV 829 Query: 660 NICTLMPMRSIPFKVVCLLGM-----------------NDGVYPRQLAPLGFDLMSQKPK 702 I ++ + + F VV M N G P+ + K Sbjct: 830 RIMSIHKSKGLEFPVVICSAMGKNFNTQDFKKSILYHHNLGYGPQFVDYERRISFPSIAK 889 Query: 703 RGDR-----SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 + ++ + A A++KL I+ R+IQD S + S ++ L D I Q Sbjct: 890 EALKSKINIENLSEEMRVLYVAFTRAKEKLIITGSTRNIQD-SIKRWSNGIESL-DTISQ 947 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH 817 L G L+ L+ L + D + Y + W K Sbjct: 948 YEILKGKNFLDWIMPCVLRHRDLSNLLEEVGLDAVFNVEHNSKWYGKLWNKNDILVEKKS 1007 Query: 818 SEFVQPLPFTLPE 830 E + + L + Sbjct: 1008 DEEKESIEEILEK 1020 >UniRef50_Q04T32 ATP-dependent DNA helicase n=4 Tax=Leptospira RepID=Q04T32_LEPBJ Length = 665 Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 56/512 (10%), Positives = 136/512 (26%), Gaps = 104/512 (20%) Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIYL 313 L R E + + + ++ ++ + L G + Sbjct: 200 RDLLTNHPGVRNALSEKYKFIMVDEFQDTNKVQAHIACLLASEHSNLMVVGDDAQCIYTF 259 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSD------ILELENRAVAGVNIEEFSRSDNKRPL 367 S + + F + + ++ + IL L N + + + D Sbjct: 260 --RGASVRGILDFPKIFSNTKTIFLEKNYRSTTAILNLANAVLQNFS----EKYDKYLFT 313 Query: 368 DPLDSSI-TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 D + SI E E + + LL +++ + + + V+ + + Sbjct: 314 DNENGSIPNVLQFEDELEEAEGIAEILLQ--KKEDGIPFKKMCVLFR-----AGWNSNQL 366 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 A R +P+ R ++ +S L + + S + +L + I Sbjct: 367 ELVLAKRNIPFVKFGGRKFIETAHIKDLLSFLKVLVNPLDSVSWIRVLKLIP-----GIG 421 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + + +S G +LLG + Sbjct: 422 NSKANGILDKIRKS-------------------------SGSFEVLLGENETAIDKYISP 456 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 + + V + +++ R +L + Sbjct: 457 LYHLYQKHRETYSEVKKVT-------------------SDFIDYYRVLLEKNYDDSKRRS 497 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP----VNIC 662 + + L +L + + +N+ Sbjct: 498 EDLDSVL------------GFSLKYTSLGDFLSDLTMDHASLSLDKIKPDDAETDLLNLS 545 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 T+ + + F +V +L +GV+P +++R LF A+ Sbjct: 546 TVHSAKGLEFDLVFILNATEGVFPSSKNTDT----------------EEERRLFYVAITR 589 Query: 723 AQQKLYISYIGRSIQDNSE--RFPSVLVQELI 752 A+++LY + + + S + E+ Sbjct: 590 ARKELYFTRPSLAHSRSGPYYTKLSRFLSEIQ 621 >UniRef50_C2M7M3 Putative uncharacterized protein n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M7M3_CAPGI Length = 911 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 116/868 (13%), Positives = 253/868 (29%), Gaps = 173/868 (19%) Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 F P ++ E ++A + + ++ L LL ++ + D Sbjct: 24 FITPHRRSALFLRKIFSEKVHKAAISPEFIT--LDNLLERISG----------IKKMPDL 71 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 + LFQL Y VY+ T V+ + W LWK Q Sbjct: 72 QGLFQL----------YKVYKEH------TESEVDDFEKFVGWGRMLWKDFS-DIDQYLI 114 Query: 182 PRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 + I+ +E + P + +L+ + LG + Sbjct: 115 AYKDIFPYME-AIKEVEHWSVGEELTP----------MQQRHLEFWRTLGTYYN------ 157 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA 301 + K++ +Q++ + + Q VG L+ Sbjct: 158 --------------AIHKVMYQQKQGYQGFIARIAYEQIDAYRQANKEKLHLFVGFNALS 203 Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 + Y+L ++ + D + D+ L N Q + + R Sbjct: 204 V--AQEKIIQYILEEM----QADIYWDIEKHFL--NNQHSAGYFIENYLKRWKYYQRERK 255 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 + I + ++ +L +L+E P ++++D D P Sbjct: 256 PKWITEEKTLPEIKIYGTPKQVNQIHLL----TTLLDEIPEEEWEQTAIVLSDSDMLLPL 311 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL-PDSRFVSEDVLALLDVPVLA 480 +QA+ LP I+ Q PV + + L R+ +++ ALL+ P Sbjct: 312 LQAI-----DTNKLPINITMGYPLQQTPVHDLISAYFKLYISGRWYHKEIKALLEQPF-- 364 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 L ++E+ ++ + +H + + ++L Y E Sbjct: 365 ------------LTNLLSEN----------YKKDTITYINEHNFSYVYKKILDLYVKEED 402 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 L+ L + ++ + +E + + + + Sbjct: 403 ------------------------RELINLLFDDEKDISVSKLIENVIKLLFFIKESLEK 438 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQ--YGDAVPLSLLRDELAQRLDQERIS-QRFLAG 657 D E + I + + + Q Y + L L ++++S + Sbjct: 439 SDKENVLNLEYIYN-FYELFNQIHYLQKKYNYIDSVKSLYYIYNDLLVKQKLSFRGEPLR 497 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR---Y 714 + I ++ ++I FK V + MN+G++P+ A + G + ++ D Y Sbjct: 498 GLQIMGVLEAQNIHFKNVLITSMNEGIFPKGNAVNSLIPFDVRANLGLPTYKESDYMYSY 557 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 F L + + + SER S V +L+ + E +++ Sbjct: 558 YFYRILQHTHRAILLYNTDTDGLRGSER--SRFVLQLLSDYRIRSQVKFPEVKIIKQNQI 615 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPL 834 ++ + + + + Sbjct: 616 EIEKDKNIIEKLVAI-------------------------------ATKIDPKHRKGFSP 644 Query: 835 ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDA 894 +L + +P+ + Q L + E EI + I ++L L Sbjct: 645 SSLTTYVRNPIDFYQQQILDIRDEAEVEEIVEDRSL-------GTIIHRILELLYTPYVN 697 Query: 895 ERLFRRFRAAGDLPYGAFGEIFWETQCQ 922 + ++ EI ++ Q Sbjct: 698 SIISKKNIDEIRKKVRETTEIVFKEYQQ 725 >UniRef50_C8RQU9 ATP-dependent DNA helicase II n=2 Tax=Corynebacterium jeikeium RepID=C8RQU9_CORJE Length = 1136 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 78/663 (11%), Positives = 170/663 (25%), Gaps = 72/663 (10%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 + + + V + D ++ + + E + D + E Sbjct: 358 NALRRHLGAQPSRVELRSADSGDFTSGGSTGAETVQVTITPTETAERLKIVDVVRRAHIE 417 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS-DRRARQSHPVLEAFISLL 458 + DI V+V S + +P + P+ + Sbjct: 418 QQ-VAWDDIAVIVRGTGSIARV-----RRTLMAYGVPVKVDPTSVVLAEQPLARMLLLAA 471 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 ++ ++L+ + + + S G L A Sbjct: 472 EASYRTLTVAEMHSVLE-GSVGGADPVMVRRVHRAVALAIRSAQMAGQVAGQAAGQTLRA 530 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + + E++ ++++L + Sbjct: 531 HEDGRPFQAADYVTELLNHPGDP---ANQWITSHCGPREKEVIQRVSTVLEAGRQAWKNN 587 Query: 579 AQERPLEEWLPVCRDM---LNAFFLPDAETEAAMTLIEQQWQAIIAEG-LGAQYGDAVPL 634 + + + L A L A ++ A+ + Sbjct: 588 QGTEMVLWKIWQATKLDMHLRAQALKGGSLGAQADADLDAVMSLFDILGDFAERNPHAQM 647 Query: 635 SLLRDELAQRL--DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 + L + R + AG V I +KVV + G+ +G +P Sbjct: 648 ESFVENLRAQKVPTGGRDQRGVRAGAVEILPAHAAAGRQWKVVAIAGVQEGEWPTGPTVG 707 Query: 693 GFDLMSQKPKRGDR------------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 G + DR +++R LFL AL A ++++ + S + Sbjct: 708 GLFGQLELVDLLDRGIDPSVPVARINDAIEEERRLFLLALSRATDSVHVTCVRNSG--DE 765 Query: 741 ERFPSVLVQEL-------------------IDYIGQSHYLPGDEALNCDESEARVKAHL- 780 PS + E+ +G+ G AL + + A L Sbjct: 766 ALVPSRFIAEMGVEPTELATADEAEGAEEAETSVGRKVSGSGAGALPRVLAIDSLLAELR 825 Query: 781 -TCLHTRMPFDPQNYQPGERQSYAREWLPAASQ---AGKAHSEFVQPLPFTLPETVPLET 836 P + AR + A+ G A + + Sbjct: 826 DAVTDPNRPGHERRAAARNLAKMARAGVYGAAPEDWWGTAEPSTDARVLAGDKIRLSPSK 885 Query: 837 LQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER 896 L+ + +RAF V+ TE + + +V+ + + Sbjct: 886 LESWNTCALRAFLDSNGGVSESTE-------------AMRVGIFIHAIAEQIVQGMELDE 932 Query: 897 LFRRFRAAGDLPYGAFGEIFWETQ-CQEMQQLADRVIACRQPGQSMEIDLACNGVQITGW 955 + LP+ G + TQ + + +++ + E +L + Sbjct: 933 --AQLAVREILPHVLDGPAWKNTQTVERWEGGVNKLHGFIAGYRDKEFELETER-TLRAR 989 Query: 956 LPQ 958 + Q Sbjct: 990 VGQ 992 >UniRef50_C1RP66 DNA/RNA helicase, superfamily I n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RP66_9CELL Length = 1162 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 80/559 (14%), Positives = 140/559 (25%), Gaps = 83/559 (14%) Query: 295 VGNPLLASWGKLGRDYIYL---------LSDLESSQELDAFVDVTPDNLLHNIQSDILEL 345 VG+P + +G G L + +E DV P + IL+ Sbjct: 316 VGDPHQSIYGWRGASPGGLARFPGAFPVVEKGPDGRERRRPADVVPLSTSWRNDIAILDA 375 Query: 346 ENRAVAGVN--IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE-EDPT 402 N A + D + V + + E + + + Sbjct: 376 ANAVAAPLRTGGARVDVPRLAPRPGAGDGLVQALVAQTVEDEADAVAAWVARWWRPAHHP 435 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 R V+ + P A LP + + P + +++L Sbjct: 436 AGARTAAVLCRKRSQFEPL-----RRALRAAGLPVEVVGLGGLLATPEVVDLVAVLQAAH 490 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + V+ LL AR + L L +W + G R +E + Sbjct: 491 DPTRGDAVVRLL----TGARTRLGASDLHALGEWARQ-GARPTGRPGGAPGVEADVVDER 545 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 + L W+S + E L L L R Q Sbjct: 546 SLVDALD--------APPPPGWRS----PSGRTVTPEGRRRLLDLAAVLRAVRAH--QGL 591 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA-EGLGAQYGDAVPLSLLRDEL 641 L E + + A + A+ A+ D L L Sbjct: 592 SLPELVGEAERLFGLDIEVQARADVTPGRARAHLDALADVAAEFARGADRPTLGAFLAWL 651 Query: 642 AQRLDQERI----SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ--------- 688 +E V + T+ + + + V + GM DG P Sbjct: 652 EAADAREDGLELPVTEPDPDAVQVTTVHAAKGLEWDAVVVAGMVDGGLPATAMLGKDGPK 711 Query: 689 -------------LAPLGFDLMSQKPKRGDRSRRD------------------DDRYLFL 717 D + + G S ++ ++R L Sbjct: 712 DSAWLTGLGVLPYPLRGDADDLPRLECAGAESPKELAERLERFRLDAGDHEVAEERRLAY 771 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 AL A++ L ++ + R S + +L+D +E + Sbjct: 772 VALTRAREALLLTAAYWGDAK-APRQASPFLTDLMDAGLAEVVGRAEEPDPKASNPRAAL 830 Query: 778 AHLTCLHTRMPFDPQNYQP 796 T PF P Sbjct: 831 TP-TAQWPADPFARDGAAP 848 Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 30/271 (11%), Positives = 64/271 (23%), Gaps = 45/271 (16%) Query: 771 ESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE 830 ++ A P P + R A++ LP Sbjct: 897 DTGAGATGAAASDRPPTPGSPVGDREDWDALADRLLAEQAARRRGDGR-------VALPA 949 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE 890 + +L R A P + L + P R + A Sbjct: 950 HLSASSLVRLAAQPEQF----ALHLRRPVPREPSPQA--------RRGTAFHAWVEAWYG 997 Query: 891 QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGV 950 + + A D+ G++ L ++++ G Sbjct: 998 RAALVDVDDLPGADDDVLPDDPGQVEL-----RAAFLRTPWAHRAPVAVEVDVETTVGGY 1052 Query: 951 QITGWLPQVQPD----------GLLRWRPSLL------SVAQGMQLWLEHLVYCASGGNG 994 + + V D ++ W+ ++ +QL + L + G Sbjct: 1053 VLRSRIDAVFSDPDRPGVPGAVVVVDWKTGAPPRDPAERASRDLQLAVYRLAWARLSGTD 1112 Query: 995 ESRL-----FLRKDGEWRFPPLAAEQALHYL 1020 + ++ L E+ + L Sbjct: 1113 PDLVRAAFCYVASGATVVPEHLPGEEEVARL 1143 >UniRef50_A8SI09 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SI09_9FIRM Length = 1160 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 80/686 (11%), Positives = 169/686 (24%), Gaps = 101/686 (14%) Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 + I V+ DI Y ++ F +P + + A +LL+L Sbjct: 370 QGVRCGKIAVVCRDISLYRAAVRYEF----RMAEIPLYCDEPTTPEFSAPATAVRALLAL 425 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 ++E + L + D+TE + L + W + R + Sbjct: 426 LRGADMTEQLTVLAKTGLC----DLTEPEVCALENYA----YTWSPNAAAWRAEFTKSPR 477 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 + + + ++ L + L Sbjct: 478 GFGDAELTEEDTQNLTRAENARKKLVTAVDTLRGKVRSANAEQISR---ALYFCLKELGA 534 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 E + R ++ E + + D Sbjct: 535 EGQQAVQVEDIRT------ARGIPAAEEAAREWNVVMQLLDEMARLLGSQGITVPEYEDL 588 Query: 641 LAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 + L + V + + MR V +LG+ +G +P A G + Sbjct: 589 FSLLLRSSDLGHIPQTLDAVVLASAGKMRLDAPDYVFVLGLAEGEFPCTPAESGLLTHAD 648 Query: 700 KPKRGDRS---------RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 + + R ++ F +AL + + L++S+ + ++ Sbjct: 649 RDLLMAKQIDLPDCFENRVVREQVCFYKALTAPAKGLWMSWPK-----GQGQTLCAALEP 703 Query: 751 LIDYIGQSHYLPG--DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP 808 +++ + + D A + + + + A L Sbjct: 704 IVEALQPAAPQLELIDLAATPADGLDVLGGGWPLTELERASLTEALRAPGEGVQAPRGLA 763 Query: 809 AASQAGKAHSEFVQPLPFTLPE-----TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE 863 + + VQ LP + L++++ F Q L + R Sbjct: 764 LLQRMEQDPPRQVQDLPTLETLLGRRLHISPSQLEKYYTCRYGYFLQYVLGLKPRRRAEL 823 Query: 864 IPDTEPFILEGLSRYQINQQLLNALVEQDD---------------------------AER 896 D + +L ++ + Sbjct: 824 SAD---------QSGTLMHWVLQMALDPHPGADNPCAGLRPFLELDDAAMADLAAALVDE 874 Query: 897 LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG------- 949 RR+ + ++ + L D + + E+ + Sbjct: 875 YARRYLPEDTARFAYLLSRLKKSMTSLLCYLRDEQNQSQFKPVACELKIGRGEDAVPGQV 934 Query: 950 --------VQITGWLP----QVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESR 997 VQ+ G + ++ DG R E VYC Sbjct: 935 YRLSDGRTVQLVGTVDRADEWIEDDGTRWVRVVDYKTGSKKLDLKE--VYCGLDCQMLLY 992 Query: 998 LF-LRKDGEWRFPPLAAEQALHYLSQ 1022 LF L +D RF L+ L+ Sbjct: 993 LFSLTRDAGGRFTGAQPAGVLYLLAD 1018 >UniRef50_Q2LTE2 UvrD/rep helicase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTE2_SYNAS Length = 657 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 59/504 (11%), Positives = 137/504 (27%), Gaps = 93/504 (18%) Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQEL 323 + ++ + + + + + G + + + Sbjct: 211 LQHYAERFEHILVDEYQDTNRIQAEIMDLLASRHRNIMVVGDDSQSIYAF--RGANFANI 268 Query: 324 DAFVDVTPDNLLHNIQ------SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFH 377 +F + PD + ++ +IL L N ++ E + + + Sbjct: 269 MSFPEKYPDCRIFKLETNYRSTPEILHLANLSIENN--ENQFAKSLRAVREAGLRPV-VV 325 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 + ++ E + R+L + + + ++ ++ + F R +PY Sbjct: 326 PARNALQQAEFVAQRILELHRD--GIPLHEMAILYR-----AHFHAMDVQMELTRRGIPY 378 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 I ++ + L + + + I ++ L Q++ Sbjct: 379 EIRSGIRFFEQAHIKDVTAYLRILGNPLDELAWKRI-----FGLCPKIGKKTAEKLWQFL 433 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 +ESG ++ L D + Sbjct: 434 SESG----------------------------------------EPLEAALREDFLKVVS 453 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC-RDMLNAFFLPDAETEAAMTLIEQQW 616 G LA L R L + + + + A+ +Q Sbjct: 454 KTARGGLAFFQEVLIKLREEAVHASTLPDLISLIIERGYRKYLRETYTDTASREEDLEQL 513 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG------PVNICTLMPMRSI 670 + L EL+ + + + AG V + T+ + + Sbjct: 514 AEFSGKFS--------SLEDFLSELSLMTNMDADGRDKAAGDDLQENKVILSTVHQAKGL 565 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 + VV L+G +G+ P + A ++ + LF A A+ LY+ Sbjct: 566 EWSVVLLVGCAEGMIPLERAVQEAGGEEEERR------------LFYVAATRAKDYLYLC 613 Query: 731 YIGRSIQDNSE---RFPSVLVQEL 751 Y + PS ++EL Sbjct: 614 YPQTDYSRWAGFANLSPSRFIREL 637 >UniRef50_C8XJ56 UvrD/REP helicase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XJ56_NAKMY Length = 1099 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 114/764 (14%), Positives = 202/764 (26%), Gaps = 102/764 (13%) Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWG-KLGRDYIYLLSDLES 319 R + E E +P A +L L+ + Sbjct: 249 QAELTRAALALLADDAVLAHEQGLVRRLFVDEYQDVDPAQARLIDRLSSGADELVVVGDP 308 Query: 320 SQELDAFVDVTPDNLL-------------HNIQSDILELENRAVAGVNIEEFSRSDNKRP 366 Q + AF P + H ++ +L R VA + D Sbjct: 309 DQSIYAFRGSQPGAMRRITVEKTVSLDVSHRLRPAVLT-ATRRVAAALPGGWPHRDLTSA 367 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 +P + + + E L D L L + V+V + P ++ Sbjct: 368 GEPRPAEVVVRTFSTAASEAAFLADELRRAHLRG-GLAWSRMAVLVRSPAADLPVVR--- 423 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 A A +P A PV+ + + LL Sbjct: 424 -RALAVAGVPCATGLVDPGSDDPVVRSILRLLDCALEPARLT-----------------G 465 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 E + + +G+D D VR L H G T L+ A + Sbjct: 466 ERAIDLMTA------PGFGMDTDAVRRLRRRLRVAHPANSGPTADLVAAA------LLGA 513 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL-EEWLPVCRDMLNAFFLPDAET 605 LP D L A ++ +LL + PL W + Sbjct: 514 PLPEDLPEDLSAPVIAA-RTLLESVRSVAEDPDPRVPLWRAWQGLGLADALLAASLRGGR 572 Query: 606 E--AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-----LDQERISQRFLAGP 658 A ++ A G + E++ R R Sbjct: 573 AGFRADRSLDAVLGLFDAAGELVARLPYAGVRAFLAEVSDRRIGLDPAGARGPGGPGGHG 632 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD------------R 706 V + + + + + +VCL G+++G +P + + D Sbjct: 633 VALLSAHSAKGLEWDMVCLAGVSEGRWPVLRRRQSLLGLDELLDAEDGVASGNIDGPGGG 692 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA 766 +++R LF A + +L + + + + PS + EL H P Sbjct: 693 DALNEERRLFYVAATRTRGRLVATSVA-----DQDTVPSRFLTELAGPAELPHGWPEQPD 747 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF------ 820 + L R DP +P + + AA+ AH Sbjct: 748 GSRRRRLQ--LTDLVADLRRAVTDPTTPEPTATAAARQLARLAAAGVDGAHPRDWFGLAG 805 Query: 821 ----VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS 876 P+ P T+ T++ P+RA + R T +EG+ Sbjct: 806 LSTSAAPVADGAPVTLSPSTVEALTRCPLRAVLERR---------GARSGTSQQQIEGIV 856 Query: 877 RYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ 936 + + L + D + R +LP + + Sbjct: 857 MHALVDGLARGVPRADLVAEMERFLAGRTNLPP-WLIARTRRALELMLTAAQTWMAELPA 915 Query: 937 PGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL 980 + + + Q++ WLPQ G R + Q Sbjct: 916 DRRPVATEA-----QLSTWLPQSDEAGRGRPVKVNGRADRIDQA 954 >UniRef50_UPI0001C31915 UvrD/REP helicase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31915 Length = 1052 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 84/827 (10%), Positives = 208/827 (25%), Gaps = 136/827 (16%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 I L + R + R L + E + L + G + Sbjct: 211 IGALRLLRDHPHVRARVAARYRHLLVDDVQEPNFAHGLLLRLLASEHGNLTAAGDDDQAI 270 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL-ELENRAVAGVNIEEFSRSDNKRPLDP 369 + + F PD + ++ A + KR P Sbjct: 271 QRFRAAATKNLRD--FQAELPDATVVQLEHSFRCPQRVLDAANAVVAPLEDRIEKRLDGP 328 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 L + F + + + + + + ++ + P I V+V I + A Sbjct: 329 LGGEVAFWRSANERAQAQSVAADVERLIGR-EGVPPERIAVLVRSIAREGQAV----AVA 383 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +R + + + A + ++ L L + V+ L P + + Sbjct: 384 LEERAVGHRLIGEAAFFQRAEVRDLLAWLRLLIDPADAPAVVRALARPPI-ELRSVDLAR 442 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + + + ++ A + GL R +G + Sbjct: 443 CTQIARRRKLDMVGALGAALESPQIPPEARDRIRMFLGLYRSAVGAIDTMRPDLF----- 497 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + L+ +L + R+ L + E + R + A Sbjct: 498 --------------VHRLIERLGLRRQQLFTAQ--AEVVERLRGL------------ARF 529 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + + + ++ ++ + L +E V + ++ + Sbjct: 530 GELATAFTQRQPQATPREFARSIAAAA-----EAGLREEEEPPPATTRGVQVMSMHAAQG 584 Query: 670 IPFKVVCLLGMNDGVYPRQLAPL-----GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + F V +LG++ P + P+ + + R L A+ ++ Sbjct: 585 LEFDHVFVLGLHAAGLPGAHTRTLEPIAPALMKETLPEDDHEAHVAEMRRLLHVAMTRSR 644 Query: 725 QKLYISYIGRSIQDNSERFPSV---------------------------------LVQEL 751 Q+L + + S + + + PS L EL Sbjct: 645 QRLVLVHPQASDR-GAAQPPSPFAEEARAAVGGVWEERAEELFGPAESLHSTYRILRDEL 703 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 ++ I ++ G+ + D + + ++ + + A AS Sbjct: 704 LETIKRTGSRIGELRFDTDLDVSHAIVRYLEVVKLAALIERSDDQSVKDALAEVNARLAS 763 Query: 812 QAGKAHSEFV----------------------------QPLPFTLPET-----VPLETLQ 838 + + L LP + + Sbjct: 764 AITSEQRDILATSPLDEYLLDADRDDRTRAAAIAAREEPSLEPFLPRRGDGVMLSASDID 823 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER-- 896 + P++ F ++ E + + + L R+ + + Sbjct: 824 TYRTCPLKYKFARVFRI--PQEPTLNQRFGILVHQVLERFHS-----DPSRPSQSLDEML 876 Query: 897 -LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME--IDLACNGVQIT 953 L G + + +R + E + Sbjct: 877 GLLEFGWRRGGFGGTEQEIQLRGKATAALTRYFERFQEEPSQPVAFERSFSFRLGPHLLR 936 Query: 954 GWLPQVQP-----DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGE 995 G + +V L+ ++ ++ ++ +Y + Sbjct: 937 GRVDRVDKLPEGGFELIDYKTGPPKSRAQLEQDVQLSLYAVAAREAW 983 >UniRef50_C6CW81 UvrD/REP helicase n=2 Tax=Bacillales RepID=C6CW81_PAESJ Length = 692 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 63/448 (14%), Positives = 136/448 (30%), Gaps = 81/448 (18%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRA------VAGVNIEEFSRSDNKRPLDPLD 371 + + F P ++ IL++ R+ + I + +K L Sbjct: 304 ARNDYILNFEKQFPGA-----KNIILDVNYRSGSGIVGLGNAVIRHNKQRRSKTLLTAKP 358 Query: 372 SSITFHVCH--SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + + E +++ + LL +E + RD ++ S A+F Sbjct: 359 HGLPPVYARPGNSDDEADLIVNTLLQQ-KEKKGRSFRDFAILFRTASSSR----AIFDQ- 412 Query: 430 PADRYLPYAISD-RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 R +P+ + V++ I+ L L R + + A+L + Sbjct: 413 LVIRQVPFIDYGSGESLYEQWVIKPVIAHLRLSIDRRNFDAMEAMLATMYVRPD------ 466 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 W D ++ L + Sbjct: 467 ---------QAMAFIWNEDKKQAKKWPLIHLTR--------------------------- 490 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + E + + L+ L E + R F+ ++ A Sbjct: 491 -FPEIKSFHQDKIKERIKLIRSLEKL--------KPEAAIRRLRIEFYDQFIEANKSGPA 541 Query: 609 MTLIEQQWQAIIAEGLGAQ--YGDAVPLSLLRDELAQRLDQERIS--QRFLAGPVNICTL 664 +T + + ++ E + + DE+A + ++ + A VN T+ Sbjct: 542 LTEHKDSLKEMLDELEASAKRFDGITAFLAFIDEIAAKHEEMKRMKLDSSNADAVNFMTI 601 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGF-DLMSQKPKRGD---RSRRDDDRYLFLEAL 720 + + F VV + G+++G+ P A + + GD + +++R L A+ Sbjct: 602 HKSKGLEFPVVFVCGVSEGILPHSSAITAEKNSDRSAIQAGDNVGEAAMEEERRLAYVAV 661 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLV 748 A+++LYIS S + Sbjct: 662 TRAEEELYISSPAY--YRGKPAAVSSFI 687 >UniRef50_B5CQ86 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQ86_9FIRM Length = 1256 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 48/388 (12%), Positives = 110/388 (28%), Gaps = 55/388 (14%) Query: 383 QREVEVLHDRLLAMLEED----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 + E ++ R+ M+ + +DI+++ I ++ F + A+ Sbjct: 537 EAEARMIARRIREMMGSGYIYDKGSDSFRKIQYKDIVILTRSIQGWA----ESFSAVLAE 592 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +P R + + L + D+ + A+L P + + E L Sbjct: 593 EGIPAYSVSREGYFETYEISVLLDYLRILDNARQDLPLTAVLTSPFV----GLDAEELAQ 648 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 +R + + T G E + + + Sbjct: 649 IRLAYPNLPFYESVWL---------CGEEKTEETGADGSGETGEKEKKEKKKSDAEAENR 699 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMT 610 S + + LA Q+ +R L+ P+ + L F E + Sbjct: 700 SGEISEAVREKLAEFTRQVRYFRSILS-YTPIHDLLAKILEETGYRTFIAAMPGGEQRIA 758 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPVNICTLMPMR 668 +E + A G Y ++L + + A V + ++ + Sbjct: 759 NVEMLIEKACA-FEGTSYKGLFNFVRYIEQLKKYNVDYGEAGIMDEQADTVRLMSIHKSK 817 Query: 669 SIPFKVVCLLGMN----------------------DGVYPRQLAPLGFDLMSQKPKRGDR 706 + F +V + GM D V Q L ++ Sbjct: 818 GLEFPIVFVAGMGKSFNMQDQRGSIVIHPDWGIGIDAVDLEQRTKNPTFLKRMIQEKTKL 877 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGR 734 ++ + + A++K+ ++ + Sbjct: 878 ENLSEELRVLYVGMTRAKEKMILTGTAK 905 >UniRef50_B1VFC4 Putative ATP-dependent DNA helicase II n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VFC4_CORU7 Length = 1188 Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 77/541 (14%), Positives = 164/541 (30%), Gaps = 55/541 (10%) Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + I +S E + D L D + +D+ V+V + +P Sbjct: 407 ERNQPIRVLRANSGTAERLHITDALRRAHVRD-GVAWQDMAVIVRSVGEIAPI-----RR 460 Query: 429 APADRYLPYAISDRRA-RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A +P + P++ ++ L + +V L++ Sbjct: 461 ALLTHGVPVRVDQTSIILAEQPLIRLLLTALEATYRPLENSEVRVLMES----MVGGADP 516 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 +R L + + ++ R + V E Q + L+ +L G A EW + Sbjct: 517 IMVRRLERVLAQALARQRLQGKPVPENTAGLPFQSS--DALSTLLNGTASAEDAAEWTA- 573 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC-------RDMLNAFFL 600 G + L + L R + +E L + Sbjct: 574 -------GFNNRELQILQDMSDVLTAGREAQRAGQSVEMVLWEIWKATGLDTRLQERALR 626 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERISQRFLAGPV 659 A ++ G + + +E+ + L + + V Sbjct: 627 GGTFGSQADQDLDSVMMLFDMAGDFVERHPNASIRTFCEEVRAQELPTGGRERGVASNAV 686 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF-------DLMSQKPKRGDR-----S 707 I + V + + +G +P G DL+ + + G R S Sbjct: 687 EILPAHAAVGRQWHTVVVTRVQEGSWPAGPTVGGLFGQLELVDLLDRGIEPGTRVSRVAS 746 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY------IGQSHYL 761 ++R LFL A+ A + ++ I + +N PS V+E+ D +G + Sbjct: 747 AVHEERRLFLVAISRATRSTLVTCIDNASVENG--VPSRFVEEITDAPGAAVPLGTVDQI 804 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFV 821 ++ + + + L + Q P + S A + +S + +E + Sbjct: 805 EQEDPVGQEATPGEPVQGELGLGLELGDSAQQGGPAVQASPAEQL---SSSDQLSPAEQL 861 Query: 822 QPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQIN 881 LP L + L+ P + + +V + + + F + + + Sbjct: 862 SALPRVLALEPLIAELRDVVTDPTQ---RHHRRVAAARNLAAMAEAGIFGSHPVDWWGMA 918 Query: 882 Q 882 + Sbjct: 919 E 919 >UniRef50_A9BHB1 UvrD/REP helicase n=8 Tax=Thermotogaceae RepID=A9BHB1_PETMO Length = 706 Score = 153 bits (385), Expect = 6e-35, Method: Composition-based stats. Identities = 51/422 (12%), Positives = 117/422 (27%), Gaps = 81/422 (19%) Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 + D + F + +I I L ++ +S K Sbjct: 322 LFKNVKDFIEDERTKVFKIQSNYRSTSDIVGLINHLIPSNSVPKVLKPKRKSYLKPF--- 378 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + + + + L+ L +DI V+ + V Sbjct: 379 ------VVETFDDLEQADAVVKIIEDKLK--EGLDYKDIAVLYRSHS-----LSMVLQQK 425 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + +PY I ++ ++ L + ++ +L + I + Sbjct: 426 LDSKGIPYRILSGLRFIETAHIKDILAFLKVLNNPLDKISWSRILKLFP-----GIGNKT 480 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + + + E+GI + ++L Sbjct: 481 ASKIYEEI-ETGIGKSPERGQ---------------------------GEENDNISNILK 512 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR-DMLNAFFLPDAETEAA 608 E + L L +E +E + D + + Sbjct: 513 ETEI--------NKFKTPLELLTKLFDN--KESSPDELIDTIYKDFYQEYSFLTYADSKS 562 Query: 609 MTLIEQQWQAIIAEGLGA-QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + +++ I + + + + LS + D++ + + T+ Sbjct: 563 RNMDIERFSEIASRYDSVSAFIEDLTLSEEIGVIPASRDKDE-------NKLTLTTIHGA 615 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + +KVV L+ +N G +P LA + D++ LF A+ A+ +L Sbjct: 616 KGLEWKVVILISVNPGDFPNGLAI-------------KEQKLDEEERLFYVAITRAKNEL 662 Query: 728 YI 729 YI Sbjct: 663 YI 664 >UniRef50_Q331U3 Putative ATP-dependent DNA helicase n=1 Tax=Clostridium phage c-st RepID=Q331U3_CBCP Length = 592 Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats. Identities = 50/394 (12%), Positives = 121/394 (30%), Gaps = 81/394 (20%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 DI+ N V S++K + + I + Q E + +++ +L+E Sbjct: 263 QDIVNKANNFVRRYYGNYRYYSNSK-AYNNSKAHIDINTYMHQQDESNEVVNKIQKLLQE 321 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 P +I V+ ++S+S ++ R +PY IS+ + +E +S L Sbjct: 322 GE--KPNEIAVLYR-LNSHSHHVEG----ELRRRKIPYYISNNSSFFKRKEIEGVMSYLR 374 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 L D+ + + + +F Sbjct: 375 LIDNPYDNSAFENIFKFRNYPIQF------------------------------------ 398 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 + L + + +A + +++ + + + + + +L + + Sbjct: 399 ----FSNKLLQDIKSFAGRNNLSLYEAFTLFKYKENWQEKNMKIFENNIEKLRLQKDKNI 454 Query: 580 QERPLEE---WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 L + + + + + E + IE + L Sbjct: 455 DICKLIDNVKLAFNIEEYIECKYSNREDQEDRLNSIETL----------KSFVKGNNLQG 504 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + + ++ V + T+ + + FK V ++G+ DG +P + + Sbjct: 505 FINY---AYNSSNKKKQDNKDCVKLMTIHSSKGLEFKHVFIIGIEDGKFPHKKSE----- 556 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 D+ LF + ++ LY+S Sbjct: 557 ------------IIDEARLFYVGVTRPKENLYLS 578 >UniRef50_C5VEC7 Helicase, uvrd/rep family n=2 Tax=Corynebacterium matruchotii RepID=C5VEC7_9CORY Length = 1079 Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats. Identities = 85/703 (12%), Positives = 181/703 (25%), Gaps = 94/703 (13%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 + V+ E + + P + FH S E + DR+ D + Sbjct: 319 QFLQHHPVDHELRLHTSYRVQARPGAPGVHFHRADSTGNMFEFVADRIRRARLIDD-VQW 377 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS-DRRARQSHPVLEAFISLLSLPDSR 464 RDI V+V + +P A +P I ++ A I + Sbjct: 378 RDIAVVVRSVGMITPI-----RRALLAAGVPVHIDPTDIVLSQQRIVSALILAVRAVHHG 432 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 ++ L P+ + + R + + P + + Sbjct: 433 LTLAELEELALGPIG------GADAVTLRRLLRGLRQVELRRTGAVAAAFQTPT--RRSL 484 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 +L E + VL E +L ++ Q + Sbjct: 485 EVLSELVLEPEPDPGLVAEVEQVLTDRE------------QDILGRIRQVIAAGRQGGSV 532 Query: 585 EEWLP------VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP-LSLL 637 EE L L+A + + A+ + Sbjct: 533 EEVLWEIWSATNLDKHLSAVSMRGGAAGSQADRDLDAVMALFDAAGDWVERRPNSTIDAF 592 Query: 638 RDELAQR--LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL------ 689 + ++ R + + VNI T + V + G+ + +P Sbjct: 593 ITHIEEQELPTGVRDRRLVVPDAVNIVTAHATSGQEWHTVIICGVQEDSWPSLSETGTLF 652 Query: 690 -APLGFDLMSQKPKRGD-----RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF 743 DL+ G + ++R LF A A L I+ + Sbjct: 653 GQEELVDLIDDGIAPGTTIARVTEQLREERRLFHMATSRATNTLIIT-AVDDPDAAEPQE 711 Query: 744 PSVLVQELIDYIGQSHYLPGDEALNCDESEA----------RVKAHLTCLHTRMPFDPQN 793 PS V++ + E + ++ + R+ +P Sbjct: 712 PSRFVRDYMQPDSPEDPWEPQERVVGEQQIDVDNPLTYTRLLSAPAIVAELRRVVTNPDE 771 Query: 794 YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET------VPLETLQRFWAHPVRA 847 Q Q+ + A + AH + + + ++ A P+RA Sbjct: 772 TQRARNQAARQLARLAEAGVPGAHPDQWWGIAGPSTTRSLPVSSLSPSRIEAGMACPLRA 831 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL-FRRFRAAGD 906 + F L R ++ A+ D++ + A + Sbjct: 832 TMSRI----------FTEEELVF---PLLRGRLLHAFAEAVALNVDSDVARLKIMDAYQE 878 Query: 907 LPYGAFGEI-----FWETQCQEMQQLADRVIACRQPGQSMEIDLAC---NGVQITGWLPQ 958 + W T + + +E++ G+++ G + + Sbjct: 879 ILAAPIWLRSHRLDTWRTVLDRTKMWIET-HRHIFEQVGVEVEAEVTIAEGMKLRGRIDR 937 Query: 959 VQPDGLLRWRPSLLS------VAQGMQLWLEHLVYCASGGNGE 995 ++ + + + ++ L Y +G Sbjct: 938 LEKTMDGDYHIVDFKSGTNHPSEKTIADHIQLLTYQLILHHGV 980 >UniRef50_UPI0001C314BA ATP-dependent nuclease subunit B-like protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314BA Length = 986 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 93/680 (13%), Positives = 176/680 (25%), Gaps = 113/680 (16%) Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 +E ++ V + E+E++ +L +L + +I Sbjct: 261 RAPLHALERGLFEPAAARDAEAGDAVRLLVAGGERAEIELVAATVLELL--GDGVPGEEI 318 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS- 467 V++ + ++ VFG+ +P+ + R + ++L + Sbjct: 319 AVVLRTPARSASLVEQVFGAY----AIPHTLDWRVPLAHTALGRGLLALARCALLPADAR 374 Query: 468 -EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 D+LA L P R ++ L V R L + W Sbjct: 375 PADLLAYLRTPGRLQRLEL----ADRLELTVR------------RRALLSMEEARRAWEE 418 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL-NIWRRGLAQERPLE 585 + P E L A+LL L R + Sbjct: 419 A-----------------RGGWPLRELDRLRGAAADGPAALLGALAREARTLFVAPHRGQ 461 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 + + A++ + + + + A L A Sbjct: 462 ARV---------LDAAEEADARALSALLRALEELGELAAAEPRRAAELLEPEALLAALGE 512 Query: 646 DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 + + G V + + +R+ F V + G+ +G +PR P F + + Sbjct: 513 LEVSLGATAREGAVLVADPLAIRARRFDTVIVCGLQEGEFPRPAHPEPFLSDDVRRELNA 572 Query: 706 ---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 D+RYLF +++L +S D + PS V ++ + Sbjct: 573 VAGLRLPLREDALADERYLFYATASRPRRRLILSCRDADE-DGNPALPSFFVDDVRALLR 631 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 + + +A + + P S A L Sbjct: 632 ELPERHRPLSAVTWPLDAAPTDAERERAEALAAPRELPHPIGSLSEAATALLRQR----- 686 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS 876 E + L+R+ PVR F + LQ D E I L Sbjct: 687 -------------EVLSAGALERYARCPVRWFVESELQPERFEPDPEAMARGSCIHSVLE 733 Query: 877 R------YQINQQLL---NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 R + I L +V + AE G A + + Sbjct: 734 RTLARVSWPIAVAELPAIEQVVREVVAEEASAFTLGRGAAAQAAAAHEIAADVLRLLAHE 793 Query: 928 ADRVIACRQPGQSMEIDL-------------------------ACNGVQITGWLPQVQPD 962 A+ +E+ +++ G + +V D Sbjct: 794 AEAEAGGAFRPAELELRFGMGDESALPALELTSAEPGDAAGGAPAEPLRLRGVIDRVDLD 853 Query: 963 GLLRWRPSLLSVAQGMQLWL 982 G R + W Sbjct: 854 GAGRALVRDYKSGRRQPSWP 873 >UniRef50_B7GM51 ATP-dependent helicase/nuclease subunit A n=1 Tax=Anoxybacillus flavithermus WK1 RepID=ADDA_ANOFW Length = 1209 Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 80/653 (12%), Positives = 170/653 (26%), Gaps = 126/653 (19%) Query: 385 EVEVLHDRLLAMLEE-----------DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 E + ++ +L E + L RDI+++ + S S ++ + Sbjct: 552 EARWIAKKIKQLLAEPFFVYDRRLKGERRLMYRDIVILCRSMSSASAMLEE-----FRKQ 606 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P S + +SLL + D+ + + A+L P++ + EE L + Sbjct: 607 NVPVYAELSSGYFSATEVSIMLSLLKVIDNPYQDIPLAAVLRSPIV----GLDEEALARI 662 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R + G + L Sbjct: 663 R------------------------------------------LAKKDGAFYEALCAFVQ 680 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF-FLPDAETEAAMTLI 612 EL + L L+ WR Q +PL + + N + ++ Sbjct: 681 EPHDDELHEKMKRWLASLSEWRTAARQ-KPLADLIWQLYRETNFYDYVGGMPGGKQRQAN 739 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSI 670 + + + + L +R D S V + T+ + + Sbjct: 740 LRALYDRAKQYEQTSFRGIFRFLRFIERLKEREDDFGAARSLTEQEDVVRMMTIHKSKGL 799 Query: 671 PFKVVCLLGMN--------------DGVY--------PRQLAPLGFDLMSQKPKRGDRSR 708 F VV L G D + P A K+ Sbjct: 800 EFPVVFLAGAAKSFNMQDLRSDYVLDKDFGLGMRFVHPTWRASYPTVAQLAIKKKMKWQL 859 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSER-----------FPSVLVQ------EL 751 ++ + AL A++KLYI + ++ ++ P+ +++ + Sbjct: 860 LAEEMRILYVALTRAKEKLYIVCTAKDMEAKKKKWQEVAYTSTWELPAYVIEKAKSYADW 919 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA- 810 I Y H + + H+ H D Q + + ++ P A Sbjct: 920 IGYALARHQQGICSSATVLHDPSLWDIHIVPAHELEQEDAQANEHRDIVEAIQQLQPVAI 979 Query: 811 --SQAGKAHSEFVQPLPFTLPETV----PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 + + + + L+R + + + Sbjct: 980 KSEYEEEVNRRLFWTYTHAPATVLRAKQSVSELKR-QRDIYGGHAEQPFRKELVERPRFL 1038 Query: 865 PDTEPFILEGLSRYQINQQLLN-----ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET 919 ++ R + ++ V D R L I E+ Sbjct: 1039 QAK---MMTPAERGTMMHLVMQHVDVTKEVTVDAVREQIARMVNGEWLTEEQATVIDVES 1095 Query: 920 QCQEM-----QQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRW 967 +++ R+ + ++ V + G + V D Sbjct: 1096 IVAFFNTPIGKRMQRATRLEREVPFYLAHEMEGETVVVQGVIDCVFEDEHGLV 1148 >UniRef50_C4LK54 Putative ATP-dependent DNA helicase II n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LK54_CORK4 Length = 1175 Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 101/918 (11%), Positives = 237/918 (25%), Gaps = 144/918 (15%) Query: 181 QPRWHRANLYQRFIETLESA-TTCPPGLPSRVFICGISALPPVYLQALQALGKH----IE 235 H + + E E P L S + G L + + E Sbjct: 144 TGAEHDSLVRDMLREHSERGADIWPERLRSALTTLG---FARQLRDFLLRVAERGCTSEE 200 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG---- 291 + R W D + R + + + + Sbjct: 201 LRQYGQGCSRDEWSAAADFYDEYRATARLMGSNALNASELVRAAVDALDSDEELAESLNF 260 Query: 292 ------EQDVGNPLLASWGKLGRDYIYL-LSDLESSQELDAFVDVTPD--NLLHNIQSDI 342 + +PL + + R L L E S+ + F + + L ++ I Sbjct: 261 DVILIDDSQFFDPLSSELVERFRSRARLTLVASEQSESVFRFRGGSTTYADKLAKTENTI 320 Query: 343 ----------------LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCH-----S 381 + + ++ ++ D S F S Sbjct: 321 HLSGTKRLAPPVAELAARVADATRHPESLRWAKEIRHQDAERLSDHSAEFGEADVRVLVS 380 Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS- 440 P EV + DR+ D + +DI V+V +P +P A Sbjct: 381 PSAEVAAVVDRVRRAHIVD-NVQWKDIAVIVRSKSQAAPM-----RRGLLAAGVPVADDP 434 Query: 441 DRRARQSHPVLEAFISLLSLPDS-RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 P++ A + + ++++ L+ P+ R + + + Sbjct: 435 TEIVLLEQPMVRAILQAVRCAVGEDLTNDELERLVLSPI----GGGDPITFRCILRGLRR 490 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 ++ D+ T +G + + A+++ + D + L A Sbjct: 491 GFMKVEFDNPVRAAELTAITTTDDEDYGRS---VFRAIDALRFILLGGELIDLTENLTAR 547 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPV------CRDMLNAFFLPDAETEAAMTLIE 613 + + + + +E L + L L + Sbjct: 548 EKDLIMRVRSVIQAGQEAFYGGESVEAILWAVWDAAGLSEALANQSLRGGAVGSMADQHL 607 Query: 614 QQWQAIIAEG-LGAQYGDAVPLSLLRDEL--AQRLDQERISQRFLAGPVNICTLMPMRSI 670 ++ + ++ + + R + + V++ Sbjct: 608 DAVMSLFDAAGDYVERHPHSTITSFVRFIVEQELPTGARDRRGPVREAVDVSPAHATVGK 667 Query: 671 PFKVVCLLGMNDGVYPRQ-------LAPLGFDLMSQKPKRGDRS--------RRDDDRYL 715 + V + G+ + V+P D + + + G R ++R L Sbjct: 668 EWDTVVVAGLQEDVWPSLSETGTIFRQEEFVDFLDRGVEPGRPENRRGRYDDRLAEERRL 727 Query: 716 FLEALISAQQKLYISYIGRSIQDNSER-----FPSVLVQELI--DYIGQSHYLPGDEALN 768 FL A+ A++ L ++ +G + D+ S ++EL + SH P E+ + Sbjct: 728 FLVAVTRARRSLLVTAVGPHVSDDGTVDSDADIRSRFLEELAGDQALASSHGEPDAESSD 787 Query: 769 CDE----------SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHS 818 + + L P + R+ E + A Sbjct: 788 SADLRALTSSGGSQTQSPLSVLPECEFPRVLSPDSLIAELRRVVESEDSSGHERHHAARQ 847 Query: 819 EFVQPLPFTLPET---------------------------------VPLETLQRFWAHPV 845 L + + ++R+ P+ Sbjct: 848 LARLALAAGDAPSRESVITAANPDHWWGVQELSTTKSLHDPETAYFISPSQVERYLECPL 907 Query: 846 RAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAG 905 AF Q T + + E + R + + + R Sbjct: 908 EAFLQSVETAGRDTTATLLGTLTHMAAEAMERGVDEGDVRDVFLATVP------RLLGTL 961 Query: 906 DLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEI-------DLACNGVQITGWLPQ 958 + + + + +++L R A + ++ + + V + G + + Sbjct: 962 TWKKHDQIDKWTDMFDRLVEKLHLRYAAVTGHAEVEQVIESRIGQTSSGDDVYVRGKIDR 1021 Query: 959 VQPDGLLRWRPSLLSVAQ 976 ++ + ++ Sbjct: 1022 LEISDVGKYYIIDFKTGN 1039 >UniRef50_D2RKU2 ATP-dependent nuclease subunit B-like protein n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKU2_ACIFE Length = 1003 Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 106/761 (13%), Positives = 213/761 (27%), Gaps = 107/761 (14%) Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 LL + G+ + L D + + + D L Q + E + Sbjct: 202 RLLKALGRCCPVEMGLFYDPKRPELSQVTEKIYGDLLGDGFQP-VPEEPVKDKPEDLAAL 260 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 I S ++E+ + + L++ + P +I+V+V + Sbjct: 261 AREWKPGAKCGLAADHIHLGEGASQEQEIRLALTSIKERLQD--GVQPEEILVLVRKLQD 318 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 Y +++ A +P + +S P+ + LL+ ++ AL P Sbjct: 319 YQGLVRS-----FAQYGIPCRLPLPADLKSQPLPDFLTKLLAAAGEKWDLSLWQALFRCP 373 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 ++ F E L +L + G +VR EL + G L + A Sbjct: 374 LMELLFQTDRENLDFL--YTQAYFSSAGAFLAHVRRKELVSAGFWDLVDFLQQDHTPEAW 431 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 L W R + + L+ Sbjct: 432 RDG------------------------------LTEWLDRWQLARTWGQLHKEGKVDLDQ 461 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-A 656 L + ++ + G A+ L +R L Q + Sbjct: 462 VKLLAGTEDFVRKTLDSLVKTWEQCGEE---KSALGLDKIRTFWKDSLAQASLPLTPGEP 518 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD--------RSR 708 + + ++ F V +LG+ +G++P ++ + Sbjct: 519 RGIPVREAGEIQGAAFPYVYILGVREGMFPAVKRESWLYSDQERAELNALGLELSLTARA 578 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 D DRY F A A ++L++S+ + E S + L + + Sbjct: 579 LDTDRYFFGSAAALASRELHLSW-----YSDEEGGASPYITGLDHFYAPDSLPVTVYEAD 633 Query: 769 CDE--SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP- 825 D S A + L P + + ++ A + + S + +P Sbjct: 634 PDRCASPALLTNCLAEQEWLGPREKETLLAAVGTDFSDRTQSARRRWEEPDSPWNGTVPG 693 Query: 826 -FTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL 884 P + +L F P A ++ E P P ++ L + L Sbjct: 694 VVKKPLHLSASSLDAFLQCPFAALVSRVWKLVPWEEQEPWPA--PDVVGNLLHQTLAAFL 751 Query: 885 ---LNALVEQDDAERLFR-----------RFRAAGDLPYGAFGEIFWETQCQEMQQLADR 930 L +E D E L + RF G +P + E +E++ Sbjct: 752 GNHLQTGLEAKDREILEQELEQVYQGIFDRFHQEGKIPDSPLLDHIRERYGKELRTWLRG 811 Query: 931 VIACRQ--------------------PGQSMEIDLACNGVQITGWLPQVQPDGL----LR 966 + P ++ + V +G + ++ +G L Sbjct: 812 ELDYEARDQLGLKPWKVEWSFGREHSPWPALTRTVDGKKVWFSGQIDRIDSNGKTWSLLD 871 Query: 967 WRPS------LLSVAQGMQLWLEHLVYCASGGNGESRLFLR 1001 ++ + + +QL L G + Sbjct: 872 YKTGQPPTGQDILQGRAVQLPLYLEALAVLGEVDPEAILGG 912 >UniRef50_C7HSP5 Putative uncharacterized protein n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HSP5_9FIRM Length = 1139 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 85/798 (10%), Positives = 231/798 (28%), Gaps = 146/798 (18%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD- 309 + + +KL + + F++ + + +L N + VG+ + +G Sbjct: 372 LDNEKLQSKLKKQFKYIFFDEYQDSNDIQNYIVEKLKNENNLFFVGDVKQSIYGFRNARP 431 Query: 310 --YIYLLSDLE---SSQELDAFVDVTPDNLLHNIQSDILE--LENRAVAGVNIEEFSRSD 362 ++ L + + ++ + D L + + I + + + ++ R + Sbjct: 432 ELFLKKLEGYDTDSNCLRINLSKNFRTDKDLIDFNNYIFDRLMTRKNSDIAYKDDNHRLN 491 Query: 363 NKRPLDPLDSSITFHV-CHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 D ++ + E L + ++ + L +DI +++ Sbjct: 492 YHFEFDEKYPKVSIKALAKNVSEEA-YLTKEINNLI--NSGLEYKDIAILLRSSSK---- 544 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 +F + +P++ + +E FI++L + +L++L + Sbjct: 545 -AYLFENELKRAGIPFSSDISKISFETVEVEFFINILKYIANPNDDISLLSVLRSEI--- 600 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 F+ +E+ L + + + + Y E+ Sbjct: 601 -FNFSEDDLAEI--------------------------SLSSEKSHFYKKFKEYEKENEN 633 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 Q + ++ + ++ + + + + + F Sbjct: 634 NLSQKISDFNTIFTDFSYILN-----FSTMYDFANIIFE-----------KSGFYDFLKA 677 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP--- 658 E + I + + ++ + D L + + R L+ Sbjct: 678 RDRGEERVKNI-EAFIELMDDYDKNNENSLFGFLAYIDNLKNQKKDNLKASRNLSDDENL 736 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK------------------ 700 V I T+ + + FK V L + + + L Sbjct: 737 VRIMTIHKSKGLEFKAVILPDFS-KRFNTRDNSKDMVLDKDLGIGINIADWENKIKISSI 795 Query: 701 -----PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD----------NSERFPS 745 ++ + + + ++ + AL A++K IS IG+ + NS S Sbjct: 796 KRDLILEKSNLNDKKEEMRVLYVALTRAERK--ISIIGKKDLNQKGLEKILNANSVLDLS 853 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG---ERQSY 802 + ++ + + ++ D + F + E+ Sbjct: 854 SYMDWILKILCDDKIMSD--FIDIDYKTDAFNKGFLEIKYIEDFIEDYKKDYTDVEKLIG 911 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETV--PLETLQR--------FWAHPV---RAFF 849 A E+ + + F + +++ + + + + P AF+ Sbjct: 912 ADEYNQKIYKDIEEVFNFSYKNKENINKSLKKSVTEIAKNYDLSKDGYEKSPFEENEAFY 971 Query: 850 QMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV----EQDDAERLFRRFRAAG 905 + R P+ E L + + ++ L + + E+ + G Sbjct: 972 EFR-----------KPNFEEIKLSATDKGTLIHKIFQELEVKSYDLNSLEKEINKLVDLG 1020 Query: 906 D-----LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ 960 LPY F I + +Q L + R+ + + + G + + Sbjct: 1021 KIKKEYLPYINFENILGFFNSKIIQDLMKKSPKIRKEESFLR---KIDDFYVNGQIDIMF 1077 Query: 961 --PDGLLRWRPSLLSVAQ 976 + ++ S+ + Sbjct: 1078 ESQNEVVLMDFKTDSIKR 1095 >UniRef50_A0AL18 ATP-dependent helicase/nuclease subunit A n=3 Tax=Listeria RepID=ADDA_LISW6 Length = 1235 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 48/388 (12%), Positives = 112/388 (28%), Gaps = 91/388 (23%) Query: 385 EVEVLHDRLLAM-----------LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 E + ++ M L+++ ++ RDI+++ + S A + Sbjct: 555 EARAIATKIREMIDNKFPIYDKKLQQNRSIQYRDIVILSRAMTSAPDM-----EEAMKVQ 609 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P+ S+ + I+LL + D+ + + A+L P++ + EE L + Sbjct: 610 DIPFYASNNSGYFETTEVATMIALLKVIDNPYQDIPLAAVLRSPIV----GLNEEELGQI 665 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R + + ++L Y + Sbjct: 666 R-----------------------------------------MAKKKGYFFDALLAYKDI 684 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF-FLPDAETEAAMTLI 612 ++ ++ + QLN WR L+ L + N + F+ Sbjct: 685 --TVSAAADRISDFITQLNNWRE-LSIRENLTALIWQIYQETNFYEFVGGLPGGKQRQAN 741 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS--QRFLAGPVNICTLMPMRSI 670 + + + + L R D + V + T+ + + Sbjct: 742 LRALYDRANQYEKTAFRGLFRFVRFVERLEVRGDDLGTAKTLGEKEDVVRMMTIHASKGL 801 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQK-----------------------PKRGDRS 707 F VV + G++ + + L ++ R Sbjct: 802 EFPVVIISGLS-KKFNMRDIYSKTLLDKDYGFASNYRDIEKMIVYPTIMQQAIKQKKSRE 860 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRS 735 ++ + AL A++KL ++ Sbjct: 861 MIAEEMRVLYVALTRAEEKLILTATVPD 888 >UniRef50_Q2RLV0 UvrD/REP helicase n=2 Tax=cellular organisms RepID=Q2RLV0_MOOTA Length = 1232 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 62/517 (11%), Positives = 126/517 (24%), Gaps = 127/517 (24%) Query: 283 AGQLFNSDGEQDVGNPLLASWGKLGRDYI---YLLSDLESSQELDAFVDVTPDNLLHNIQ 339 + +G+P A +G G DY LL D +++ + ++ Sbjct: 772 KKWTGDGKNLFVIGDPDQAIYGFRGADYRFFGQLLEDFPAARVFRLTRNYRSTPVILRAA 831 Query: 340 SDIL------ELENRA-----------VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSP 382 + ++ +L A + S P I Sbjct: 832 AAVVAHNPGGDLRAAAGGELAATTASTTSPAAGPGISGGGGLVATRPEGGPILHLEAPGE 891 Query: 383 QREVEVLHDRLLAMLE----------------------EDPTLTPRDIIVMVADIDSYSP 420 + + ++ D DI V+ Sbjct: 892 TAAGIAIVREIGRLVGGATMLQAHGQDGGTWREGPETGSDGAYGFSDIAVLCRTGHQL-- 949 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 LPY I R + + ++ + +L L Sbjct: 950 ---KALEECFLKEGLPYRIVGRESFLEERPVREALAFCRCLVNPEDDFHLLKYLGSG--- 1003 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 + EE +R+ + G+ + Sbjct: 1004 -SAGVGEEVAIQVRETALKRGVPAWL---------------------------------- 1028 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 +I EL G L + + L +R L ++ P + L Sbjct: 1029 ---------------VIRELAGELQNFINSLEAYRAALDKQSP----AELLARWAGEHGL 1069 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 D + + + + +++ + A G + V Sbjct: 1070 LDEPSISRLLRVAERFPDLSAFLRGVVLAGEADHER------------PGNNGASPEVVT 1117 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + TL + + F V + G+ DG+ P + P ++R LF + Sbjct: 1118 LMTLHAAKGLEFPAVFIAGVEDGLLPLKEGPGVTLS---------PEEMAEERRLFYVGM 1168 Query: 721 ISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYI 755 A++ L + R + PS + E+ Sbjct: 1169 TRARELLVLVSSRRRELRGTVVPAEPSPFLGEIPADC 1205 >UniRef50_A6CDV1 UvrD/REP helicase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CDV1_9PLAN Length = 1171 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 94/799 (11%), Positives = 209/799 (26%), Gaps = 149/799 (18%) Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA---SWGKLGRDYI 311 L + R+ + + + ++ + + G LL + I Sbjct: 360 RDLFRRDPNARQRAAAGIHYLMVDEFQDTDPVQSEIVRALCGKELLTGKLFLVGDAKQSI 419 Query: 312 YLLSDLESSQELDAFVDVTPDNLL-----HNIQSDILELENRAVAG------VNIEEFSR 360 Y + ++ L Q IL N A ++ F + Sbjct: 420 YRFRRADPEVFHQLRQEIPEKGRLPLSTNFRSQPAILNFTNCLFASAMAHYYESLTPFDQ 479 Query: 361 SDNKRPL-------DPLDSSITFHVCHSPQREVEVLHDRLLAMLEED------------- 400 + P D I + E + + R+ +LE++ Sbjct: 480 QQHSPTPGIEFLFASPDDPDIKLADAI-RETEADWIAARIRQLLEDETPRIWSKNPQSGE 538 Query: 401 ---PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 + P DI ++ + S +++ A + L Y + RA + + +L Sbjct: 539 RELRRVEPGDICILFRSLSSV-----SLYEKALQEHNLDYYLVGGRAFYAQQEIYDLSNL 593 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 DS +L LL P F ++++ + + + Sbjct: 594 CQYLDSSDDELSLLGLLRSPF----FSLSDDTIYAITRHA-------------------- 629 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 + V P D V + ++L +L + Sbjct: 630 ---------------------ESLTAAMQVAPPDHVRPEQKRQVRYAQAVLQELRTKKDR 668 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 L+ L L R +A L + + + + + +I + L Sbjct: 669 LSLVELLNLALE--RTGYDAALLNEFLGDRKLANLRK----LIELARNFEASGLFTLKDF 722 Query: 638 RD-----ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG--------- 683 L + ++ + + + + T+ + + F VV + M+ Sbjct: 723 VQRIRDSILEESKEELAATLPETSDVIRLMTIHQSKGLEFPVVIVADMDRRSQGASKDPF 782 Query: 684 ---------VYPRQLAPLGFDLMSQKPKRGDRSRRDDDR-YLFLEALISAQQKLYISYIG 733 P + + + + +++ +D+ L A+ A L +S Sbjct: 783 LHPEWGALLNLPAERGVTPENFAFKMHRAIEQNADEDETVRLLYVAVTRAADYLILSAGL 842 Query: 734 RSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA------LNCDESEARVKAHLTCLHTRM 787 + R S ++ L + S LP + + + + + + + Sbjct: 843 PYDR----RVQSPWMKLLSRHFDLSTGLPTLDPYLGHFTMGNVQQDQIPEIRVHLNRPQT 898 Query: 788 PFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRA 847 P + S L S G + V + L+ A + Sbjct: 899 ATKPAKKIKELKPSQFWAALEQGSPGGYPETFTVFAPQKNRQSHFSVSHLE--VADAL-- 954 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDL 907 ++ E + ++ ++ E+ R Sbjct: 955 ----IQELPEPQYQRLSTADLLNADEATQLGTLTHSVIER-LDPLKPEQSDRIVELVLFD 1009 Query: 908 PYGAFGEIFWETQCQEMQQLAD-----RVIACRQPGQSMEIDLACN-------GVQITGW 955 G+ Q++ + + A R + +E L V +TG Sbjct: 1010 QPQVAGDKLKPLIQQQIAAWYESEICSALKAARVHYRELEFLLRLPATSDKESAVTVTGM 1069 Query: 956 LPQVQPDGLLRWRPSLLSV 974 + V RW Sbjct: 1070 IDAVYQTDDQRWVVLDYKT 1088 >UniRef50_A7Z3H2 YjcD n=3 Tax=Bacillus RepID=A7Z3H2_BACA2 Length = 761 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 43/432 (9%), Positives = 109/432 (25%), Gaps = 78/432 (18%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSIT---FHVCHSP 382 F P + ++ + + + ++ ++ L + + + Sbjct: 395 FQKDYPAAKTIYLTANYRSPHPIVSSAHAVVKKNKKRYEKTLSAVKDGVHNPVMFYPYDE 454 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + E ++ + ++ +P D V+ + + +PY Sbjct: 455 EEEATMIVSDMKEKIQN--GASPDDFAVLYRTNSAGRAIYER-----LHQSSIPYHADRG 507 Query: 443 RA-RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 S ++ ++ L + + V LL P L Sbjct: 508 VQTFYSRRIVRQILAYLYASQNEDDPDAVKDLL--PALF--------------------- 544 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 + + L ++ +++ + + Sbjct: 545 ----------------------LKQSALQTLKALSITEDCTMIKALTKLPDLKPFQIGKI 582 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 + + + E + L + E + Sbjct: 583 KQIVPFFASIRTM--KPVEAITFAESKMGFSEYLKKRGNEGNKLEKGSDDLRD------- 633 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 + + + E + V + T+ + + F V +LG Sbjct: 634 --VKVAAKKFKTIPDFLAHVDHMRAAENLKT--DENGVELLTIHRSKGLEFNTVYILGAA 689 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 DG P D + ++GD + +++R L A+ A Q LY+S Sbjct: 690 DGSIPH-------DFALETARQGDPAPLEEERRLLYVAMTRAMQHLYVSCPAYR--RGKT 740 Query: 742 RFPSVLVQELID 753 S ++ L+ Sbjct: 741 ARSSRFLEPLLR 752 >UniRef50_Q189U3 Putative ATP-dependent DNA helicase n=8 Tax=Clostridium RepID=Q189U3_CLOD6 Length = 688 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 51/457 (11%), Positives = 139/457 (30%), Gaps = 88/457 (19%) Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQ------SDILELENRAVAGV--------NIEE 357 + + + Q + F PD LL Q IL++ R+ + + + + Sbjct: 245 NIFAVGDEDQSIYGFRGARPDFLLEFEQYFNNTKKIILDINYRSKSEIVHTANRLIDKNK 304 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + S+T+ H + E + ++ +++D + D V+ Sbjct: 305 NRYEKIIKCSQGDGGSVTYISPHDSEEEALYIAREIIDEIQKDY-VEYSDFAVIYRTNIQ 363 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRR-ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + D +P+ + D H + ++ L + + ++D L +++ Sbjct: 364 SRALV-----DVFMDMRIPFVVKDSVITIYDHWASQDILAYLRIGINPKSNKDWLRIINK 418 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P I+++ + ++ Sbjct: 419 PF----RYISKDSINMVKD----------------------------------------- 433 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 E + L + V + L + L+ + L + + Sbjct: 434 ------EKDFITALINKCNLHPKQVKTINDLEIDLS-YLNTLNPKNAISYIRTSL----- 481 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERISQRFL 655 + + + + I+ E + ++ + + + + ++ Sbjct: 482 DYDRYVLDYCSNRKIKTNGLVEILNELESSATN-FNTVTEFLEHIDRVKTELTENNKNKQ 540 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 V T+ + + F+ V ++G+N+G P + + ++ + + R L Sbjct: 541 TEGVIFTTMHSAKGLEFRNVYIIGVNEGTIPHEKSYDICKEEKKEEQLEEE------RRL 594 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 A+ A++KL IS + + S+ + ++ Sbjct: 595 MYVAITRAEEKLCISSTLN--KYGKKVDKSLFINDIK 629 >UniRef50_A5DGH7 Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DGH7_PICGU Length = 830 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 53/419 (12%), Positives = 118/419 (28%), Gaps = 53/419 (12%) Query: 342 ILELENR--AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 IL+ + RS P ++E + ++ +L Sbjct: 303 ILDFSESIMRQQKSRTIKNLRSQKNATYKP-----VIASLKGSEQEGRWIVYQIETLLSL 357 Query: 400 -DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 L DI ++ + + R +PY + +A + F+ L Sbjct: 358 PGQPLRHEDIAILFR-----AAYQTRAVEQELTRRGIPYLMLRGKAFWDRKEVVVFMDYL 412 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + + ++ L+ P + I E+ ++ + + S + Sbjct: 413 RVVSNESDRLALVRTLNYP----KRGIGEKAMKLIENELQNS----ANSVHQTLVAFCKS 464 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + LG + + +D+S S L + Sbjct: 465 GQLSSKTKEGLSAYLGLIERCREHLDHYEMTHDKSLLERLSSELLRDSGLQT--EFEDDS 522 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP-LSLL 637 + + E D + + E + + Q D + Sbjct: 523 NKMLNITEVQRQLLDF-------EPQDEQ--------IELFVGGSENDQADDPFNHIQKF 567 Query: 638 RDEL-AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + ++ S+ + + T+ + + + V + G+++GV P GF + Sbjct: 568 VQAIGLYESEESAQSKEKSTSRITLSTIHGSKGLEWHTVFVPGLSEGVLPA-----GFAI 622 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI-SYIGRSIQDN-SERFP-SVLVQELI 752 + D ++R F A A+ LYI SYI + S + ++ Sbjct: 623 ADNSEQSAD-----EERRCFYVATTRAKTLLYISSYIEEEGKWGRKPIEAVSRFLTKIK 676 >UniRef50_A8STY9 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8STY9_9FIRM Length = 1303 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 49/391 (12%), Positives = 118/391 (30%), Gaps = 63/391 (16%) Query: 385 EVEVLHDRLLAMLEEDPT------------LTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 E + + +++ +++ D + DI++++ + + VF D Sbjct: 611 EAKYIANKIHEIVDGDDPMYIHDGDGTVRKVEYSDIVILLRSVSGSAT----VFDQVFED 666 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +P I + +S+LS+ D+ +V D+ A+L P++ + EE L Sbjct: 667 EGIPIYIQSESGYFGAVEVSCLVSMLSVIDNSYVDGDLAAVLRSPMV----GMDEEELAR 722 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 + G D + +L ++ G + + Sbjct: 723 IVGEYRTRYEIDGRDYNVRLYDKLIDYLENHDDEG----------QGECAGLDDMAKSSA 772 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA----FFLPDAETEAA 608 + G +L+G + + + L L + + + R +L+ +F+ Sbjct: 773 AIGDEDKLIGKVRAFVGML----DYLKENKNFMSLSDIIRYVLDQTGFYWFVGARPMGRR 828 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-AGPVNICTLMPM 667 + G + + + LD V + T+ Sbjct: 829 RQANIDMLIKKADDFEKNSKGVFNFIRYVNELKTNSLDFAEADIVSDNDDVVRVMTMHKS 888 Query: 668 RSIPFKVVCLLGMNDGVYPRQ-----------------------LAPLGFDLMSQKPKRG 704 + + F V+ + G+ + + L + Sbjct: 889 KGLEFPVLFVAGLG-KSFNMKDVQKKVLVHQQYYLTASAIDADARVKRDTFLRNVMASEM 947 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 ++ + AL A++KLY++ +S Sbjct: 948 RVENYAEELRVLYVALTRAKEKLYMTGCPKS 978 >UniRef50_Q8RCZ0 ATP-dependent helicase/nuclease subunit A n=3 Tax=Thermoanaerobacteraceae RepID=ADDA_THETN Length = 1204 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 70/646 (10%), Positives = 176/646 (27%), Gaps = 132/646 (20%) Query: 381 SPQREVEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 Q E V+ +R+ + E + RDI V++ + ++ F Sbjct: 531 DMQVEAHVVGERIKGLFREGFKVYDKEIGGYRPVEYRDICVLLRATEKWA----YAFEEE 586 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +P ++ +SLL + D+ +LA+L P+ F TEE Sbjct: 587 FVKMGIPVFADTNAGYFDTAEIKTMLSLLQVIDNPMQDIPLLAVLRSPI----FSFTEEE 642 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L +R +E A G L Sbjct: 643 LVDIR------------------------------------------LEDADGTIYEALK 660 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETEA 607 EL + + L L W+ + P++E+L + ++ + Sbjct: 661 KASLRED--ELGEKVRNFLDSLKRWQEK-SIYMPVDEFLWYLYEETGFYSYVGAMPQGVE 717 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ--ERISQRFLAGPVNICTLM 665 + E + + L + V + ++ Sbjct: 718 RQANLR-VLFERAKEYEETSFKGLFNFVNFINRLRTTSTDMGSAKTVGENENVVRVMSIH 776 Query: 666 PMRSIPFKVVCLLGM---------NDGVYPRQLAPLGFDLMSQKPKRGDR---------- 706 + + F +V + G+ N+ + +G + + + + Sbjct: 777 KSKGLEFPIVIVAGLGKQFNTKDLNEKILYHHFLGIGPEFVDYRRRLSYPSIVKEAIKYK 836 Query: 707 ---SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER----------------FPSV- 746 ++ + AL A++KL + + I++ +++ S Sbjct: 837 IKLESLSEEMRVLYVALTRAKEKLILVASVKDIKERAKKWGKAKLLGKKISEYDVLKSRS 896 Query: 747 LVQELIDYI---GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA 803 + + + L ++ + + K + + R + G Sbjct: 897 YIDWIGSALIRHRDLKLLREFAEISPELEQDSSKWEVKIWNKRDVIIERKKDEGIEVLER 956 Query: 804 REWLPAASQAGKAHSEFVQPLPF--------TLPETVPLETLQRFWAHPV------RAFF 849 L + E + L + LP + + ++R V F Sbjct: 957 LNALNLEGLHTEFRKEVEERLNYVYPYDRSSKLPAKLSVTEIKRILNDEVIDEETTSIFE 1016 Query: 850 QMRLQVN---FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGD 906 + L+ + + + + + +++ L +++ + + Sbjct: 1017 RRVLKTPLFLEKKRGLTPAERGIAMHLVMQKLDLSKDLSYRGIKEQIKDMVKNEILTEEQ 1076 Query: 907 LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQI 952 +I + L R++ ++ + + + + +I Sbjct: 1077 AKEVDANKIERFFKT----PLGKRLLKAKEVRREVPFHIKISSREI 1118 >UniRef50_C0QTS0 Putative UvrD/REP helicase n=1 Tax=Persephonella marina EX-H1 RepID=C0QTS0_PERMH Length = 1021 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 88/790 (11%), Positives = 207/790 (26%), Gaps = 162/790 (20%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 ++ P L + R + ++ + ++ L G+P + D Sbjct: 320 LRYPDLLEEYRERFKAFFIDEFQDTDQIQTDIIRMLSERSDLIVFGDPKQCIYEWRSADL 379 Query: 311 IYLLSDLESSQELDAFVDVTPDNLL------HNIQSDILELENRAVAGVNIEEFSRSDNK 364 +S E +E V L +++D L + + Sbjct: 380 YNYISFTEDFEERTLNVCYRSGPSLVGFFNLFFVENDFLNRDYSNRKVKELYHLEEKYIP 439 Query: 365 RPLDPLDSS------ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 + S + S V L +++ +L + +P DI+V+ Sbjct: 440 ELFYSSEKSLDITDPVEIVKTESDTEPV-ALAEKIKQLL--NSGYSPEDILVLFRSRSKT 496 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 +IQ +P+ + + +++L L + +L +L PV Sbjct: 497 DRYIQE-----LRKSNIPFISFLSSNFYNSVEVITVLNILKLIQYPYDQLTLLKVLKSPV 551 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 F +++ + +R +L + Q L + + Sbjct: 552 ----FSFSDKEIYQIRN-----------------DLYIDRIPQLKEIKRLEEIKDSLNIS 590 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 LP E L + +A+L +L L Sbjct: 591 QILDRVYRDLPVLEIFSLYPDGKQKVANL-EKLKFIADRL-------------------- 629 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 E + Q + R E + Sbjct: 630 -------EGENFQLRDFIQFLED---------------------NRYKDEEDALITTDDR 661 Query: 659 -VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK----------------- 700 V + T+ + + KVV + G+++ + + GF + + Sbjct: 662 FVKVMTMHRSKGLEAKVVIIPGLSERI---NRSTNGFFTVEDEIMVRIRDDYNREVARTL 718 Query: 701 ---PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 ++ R +++ L A A+++L + Y G + E+ I + Sbjct: 719 NFDEEKVKRKIYLEEKRLLYVAFTRAKERLILFYSGSKG----------YMNEIETVIER 768 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH 817 + + + + + + + + + R + Sbjct: 769 INGKEVTVYTQDRKPVSFKLEIKMTEPSGISNNIRYWS-DIIKRQDRNIMEKLKLLKDEE 827 Query: 818 SEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 + + + + L ++ + E S + + + + L Sbjct: 828 EGRKEEFEKAVSAKIFTTVSAL-----------------IDEKNEKSVVEEFQISEDDSL 870 Query: 876 -------SRYQINQQLLNAL-------VEQDDAERLFRRFRAAG-DLPYGAFGEIFWETQ 920 I ++L +++ E LF RF + +I E Sbjct: 871 KERDIPVETGIIVHKILEYFSFPEDLKEAENEIEELFERFSGLITEDNRDKVRDISLEKL 930 Query: 921 CQEMQ-QLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRW--RPSLLSVAQG 977 + ++ + + R + M L G I G + V + + + Sbjct: 931 KRFIRSDAYKDISSSRIIFREMPFTLKEGGRYIEGKIDIVYEKNGVIYVGDYKTGRIKDE 990 Query: 978 MQLWLEHLVY 987 + + Y Sbjct: 991 EKYRPQERYY 1000 >UniRef50_C8NWA9 ATP-dependent DNA helicase n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NWA9_9CORY Length = 1040 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 83/691 (12%), Positives = 173/691 (25%), Gaps = 128/691 (18%) Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS-DRRARQ 446 + D L + + RD+ V+V + P +P AI+ Sbjct: 323 FVADTLRRA-HLEEGVPWRDMAVVVRSVGMIEPL-----RRTLLQAGVPVAINPTDLVLG 376 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 ++ A + L + + LL G G Sbjct: 377 EQRIVAAMLLGLRAL-NGLDATHWRELL-------------------------LGPVGGA 410 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 D +R L + A+ ++ ++L E + L Sbjct: 411 DPVTLRRLLRGLRRWRPEVRAEDTLSELLALRGELPDFGAILTQRE--------LDILDR 462 Query: 567 LLMQLNIWRRGLAQERPLEEWLPV------CRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 + L R L +EE L + L A L + A+ Sbjct: 463 IRGVLEAGRTSLDDGGSVEEVLWAVWAQTGLAESLMAIALRGGAAGSQADRDLDAMMALF 522 Query: 621 AEGLGA-QYGDAVPLSLLRDELAQR--LDQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 + + + ++ R + + V + T + F V + Sbjct: 523 DAAGDFTERRPTATIEAFIAHIEEQELPTGVRDRRTAVPDAVPLLTAHGVAGREFARVIV 582 Query: 678 LGMNDGVYP-------RQLAPLGFDLMSQKPKRGDR-----SRRDDDRYLFLEALISAQQ 725 + + +P DL+ Q R ++R LF A+ A + Sbjct: 583 SEVQELSWPTLSETGTLMRQEDLIDLVDQGIDPATPVSHTVDRLKEERRLFHVAVTRATE 642 Query: 726 KLYISYIGRSIQDNSERFPSVLVQE--------------------------LIDYIGQSH 759 ++ ++ + D PS VQ+ L D + S Sbjct: 643 QVIVTAVDAPDGD-EVIEPSRFVQQFADARGTIPEHVSTGTAASGAAEQQTLFDGVDTST 701 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 + ++ + R D + + + Q+ + A + A Sbjct: 702 TGREEVHVDVAPVRVLAVEDIVAELRRAITDESSSEDVKLQAARQLARLAEAGVPGADPG 761 Query: 820 FVQPLPF-------TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL 872 + P + ++ P+R + D P Sbjct: 762 QWWGIREASISEGVEPPGRLSPSRIEGLLECPMRNVLER--------------DVAPASS 807 Query: 873 EGLSRYQINQQLLNALVEQDDAERL-FRRFRAAGDLPYGAFGEI-----FWETQCQEMQQ 926 + ++R + A+ D E A L + + Q Sbjct: 808 DAMTRGTLAHYFFEAVGNGADVELAQADTLEAYRALFTVPSWKEVSDLGEFTRLLGRAAQ 867 Query: 927 LADRVIACRQ-PGQSMEIDLACN-GVQITGWLPQVQPDGLLRWRPSLLS----------V 974 + + + +D+ G++I G + +++ + L Sbjct: 868 WVEETRGTFELVDTEVPVDVEVAPGLRIGGRIDRLEREESGAVHIVDLKTGKNHPSAAEA 927 Query: 975 AQGMQLWLEHLVYCASGGNGESRLFLRKDGE 1005 + QL+ L + + GE Sbjct: 928 EENPQLFAYQLALSRGALREGTDASVATAGE 958 >UniRef50_A7VD84 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7VD84_9CLOT Length = 672 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 58/507 (11%), Positives = 145/507 (28%), Gaps = 94/507 (18%) Query: 251 IKDPAYLAK-LLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE-QDVGNPLLASWGKLGR 308 ++D + + K R + ++ + + + L VG+ + +G G Sbjct: 193 LRDRSDIRKMWQQRFQYILIDEFQDINWIQYQTVKLLLGKKQNIFAVGDDDQSVYGFRGA 252 Query: 309 DYIYLL---SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKR 365 D +L ++ ++ + + + + I+ N E + ++ + Sbjct: 253 DTKLMLGFPNEFPGTRLVYLNTNYRCSSAIVESACRII--------KNNKERYKKAIHSA 304 Query: 366 PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV 425 + ++E + + ++ M + +I V+ + Sbjct: 305 FEKSQCERVHVIEVDGMRQETDGIVQKIRKM--NQNGIPYSNIAVLYRTNSE-----PSG 357 Query: 426 FGSAPADRYLPYAISDRRA-RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 +P+ + D SH V+ + + L +++ P Sbjct: 358 LAMKLMQSNIPFRVKDSIPDLMSHFVVVNILDYIKAALGNRERALFLRIINRP----NRY 413 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 ++ E L T RM Y Sbjct: 414 VSRESLE-------------------------------TDPVDTERMKEFY--RDNNRLV 440 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 Q+++ + IAEL +N R+ + + L + Sbjct: 441 QNMVTLEADLRRIAELKP-----YAAVNYIRKAVG-----------YDEYLKEYASYRGI 484 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 I ++Q + + + +E +L ++ + V + T+ Sbjct: 485 NPQEYMDIADEFQEMARDA-----DSFIEWFNFLNEYRIKLKEQMKTTDHTRDAVVLATM 539 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + + F V ++ +G+ P + + + +++R +F A+ A+ Sbjct: 540 HGAKGLEFDQVFIMNAVEGMTPHKKSVAD-------------AELEEERRMFYVAVTRAR 586 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQEL 751 LYI + S V E+ Sbjct: 587 YGLYIYVPK--VVYGKTARISRFVTEM 611 >UniRef50_C4Z0W6 Putative uncharacterized protein n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z0W6_EUBE2 Length = 621 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 54/459 (11%), Positives = 130/459 (28%), Gaps = 100/459 (21%) Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQ--------------SDILELENRAVAGVNI 355 Y L + Q + F P +L + + + A Sbjct: 233 YRNLFVVGDDDQSIYGFRGSAPQIMLDFNKYYSDAVRIDMCINYRSTGNIVLASRAVAEE 292 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 E + + S+ + +S E + + ++ D + DI V+ Sbjct: 293 NEQRYYKDITTYNSQGDSVFIYEFNSLNDEKAFVTSEIRRLI--DSGIAADDIAVLSRT- 349 Query: 416 DSYSPFIQAVFGSAPADRYLPYA-ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 I ++ S +P S + H + + ++ + + D L ++ Sbjct: 350 ----NVIGNMYMSRLESDGIPCCDYSAVQDVYEHWISKDILTYIRIALGSRERMDFLRII 405 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + P+ + ++ L+ + ++ Sbjct: 406 NKPIRYITRS-------------------YITQPADINALKRSCERNEQMSEQVEKLASD 446 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 M + +V + G R+ Sbjct: 447 INMIRNMSPFAAVNYIRKGIGYD-------------------------------EYIRNY 475 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 + +A + + + LS D + + L Q +R Sbjct: 476 IYEH-------KADKEELYNVLDELAHRASRY-----MSLSQWLDGITEYLKQCDTQRRN 523 Query: 655 LA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 V++ T+ + + +K+V ++ + +G+ P A L + +++R Sbjct: 524 NTVEGVHMLTMHGSKGLEYKIVMVMDVCEGIIPYNKAVLD-------------EQIEEER 570 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 LF A+ A++KLY+ + N + S ++E++ Sbjct: 571 RLFYVAMTRAKEKLYLLSPKQR--YNKDTTRSRFLEEIL 607 >UniRef50_B1HN90 ATP-dependent helicase/nuclease subunit A n=2 Tax=Bacillaceae RepID=ADDA_LYSSC Length = 1238 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 74/721 (10%), Positives = 175/721 (24%), Gaps = 130/721 (18%) Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE---- 399 E E V D D + Q E + DR+ M+E+ Sbjct: 528 EKEVPVELVVMHPPQDEETVDEQEDKTDEASELEELKKSQYEARFIIDRIRQMMEDGTTV 587 Query: 400 -------DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 + L DI++++ + + ++ +P + + Sbjct: 588 YDTKSMTERPLKYSDIVILMRSMTWSTDLVEE-----FKLAGIPLYAESSKGYFDALEVM 642 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 +++L + D+ + + ++L P + +TE L +R Sbjct: 643 IILNVLKVVDNPYQDIPLASVLRAPFV----GLTENELAKIR------------------ 680 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 A + + L + + E G+ L ++ Sbjct: 681 ----LADSKVPFYDALRQFIRS-----------------EGQGVQTTTFEKLQRFMLAFE 719 Query: 573 IWRRGLAQERPLEE--WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 WR LA+ L + W + + + Sbjct: 720 NWRD-LARRGSLSDLIWKIYLDTHYYEMVGAMPNGKQRQANLR-ILHDRALMYEQTAFRG 777 Query: 631 AVPLSLLRDELAQRLDQERI--SQRFLAGPVNICTLMPMRSIPFKVVCLLGMN------- 681 D + R D S V + T+ + + + VV + GM Sbjct: 778 LFRFLRFIDRMRTRGDDLGTAKSIGEKDDVVRLVTIHSSKGLEYPVVFVAGMGRPFNKMD 837 Query: 682 -------DGVY--------PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 D + P ++ + R ++ + A+ A+++ Sbjct: 838 FHHPYLFDQDFGLAVKAIDPENRITYTSLPFLALKEKKELEMRAEEMRVLYVAMTRAKER 897 Query: 727 LYISYI------GRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 L + R +++ PS L +Y+ D + Sbjct: 898 LILVGSVKNWEKTRDNWQDAQNIPSD--APLQEYLRARANSYLDWIGPAVARHGDFASQA 955 Query: 781 TCLHTRMPFDPQNYQP---GERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE------- 830 T + + + SY + Q E L Sbjct: 956 TTSYKELDSPSHWWIQPIDTRHYSYDIQAFNDEIQQHLTTQEDEALLSEIKARFHAQYTY 1015 Query: 831 --------TVPLETLQRFWAHPVR----AFFQMRLQVNFRTEDSEIPDTEPFILEGLSRY 878 + ++R + +F + + + L G Sbjct: 1016 QKSTRKRSKTSVSEIKRLENLQRQEEPEYYFATPAKRTSTSIAPRPTFLQDQQLTGTEIG 1075 Query: 879 QINQQLLN----------ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLA 928 ++ V+ A + ++ + +++ + Q+ Sbjct: 1076 TAVHTVMQHIPQFGFDTIEAVKGFVANLVAKQLLTEAEGKVVPIKKVYHFFHTEIGQRF- 1134 Query: 929 DRVIACRQPGQSM--EIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV 986 + R+ +D + + G + + D W + + + + Sbjct: 1135 KQARQIRREMPFTISRVDEDGDAQIVQGIIDCLFEDEYGNWVLLDYKTDRILPHFAKEPA 1194 Query: 987 Y 987 Sbjct: 1195 L 1195 >UniRef50_C0XV87 ATP-dependent DNA helicase n=10 Tax=cellular organisms RepID=C0XV87_9CORY Length = 1096 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 101/804 (12%), Positives = 210/804 (26%), Gaps = 102/804 (12%) Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG---QLFNSDGEQDVGNPLLAS 302 + G + Y +L + S R L + + VG+P+ A Sbjct: 269 EFVGASQRQRYRVVMLDEYQDTSHAQRVLLRSLFGQGRNADQPRRHPLTVTAVGDPMQAI 328 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS--DILELENRAVAGVNIEEFSR 360 +G G L+ L + ++ ++L L NR + R Sbjct: 329 YGWRGA-TAANLAAFVEDFPEPTGAPAPTKQLTTSWRNPAEVLALANRVSDSLLGTGSDR 387 Query: 361 SDNK--RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL-TPRDIIVMVADIDS 417 + E++ + D L A + P V+V + Sbjct: 388 VVAALDPRPGAGAGEVELGFFEHEDEEIDFVADNLAAQYDAARAAGEPFSAAVLVRKNKT 447 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 A +R +P+ I P + I++ S+ S L +L P Sbjct: 448 -----SPEVAEALEERGVPFEIVGLAGLLDVPEVADTIAIASMLVRPGDSAAALRILAGP 502 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR-----FGLTRML 532 + + L L + + +R + T + R+ Sbjct: 503 AV----GLGLADLDALSR--RAANLRGAAPAAPKPDEAADPTTHFEAQLEESVAEAQRIT 556 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 G ++ G +V E+ + + + ++ +L R +R V Sbjct: 557 AG--ADTPAGLTDAVADLGETERYTPDGLRRIKAVASKLRWLRTHALGKRLP----DVFA 610 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 D+++ F + + ++ E L + + Sbjct: 611 DIISVFGIRTEVLARPSSTGTVHLDRLLEEVSSYPGTSLTALLDYFELTREHEGGLAPGN 670 Query: 653 RF-LAGPVNICTLMPMRSIPFKVVCLLGMNDGVY----------PRQLAPLGFDLMSQKP 701 V I T + + + V ++ + Y P+ + FD + Sbjct: 671 VPVRTDRVQILTAHKAKGLEWDTVAVIRADAETYKARTATFLTQPQLVPDEDFDAFADAE 730 Query: 702 KRGD------------RSRRDDD-RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 R + R++ ++ LF A+ + +KL ++ P Sbjct: 731 NRTEFAKAAKAYVAAVRTKLAEESARLFYVAVTRSARKLIVTGSAVKPGRKKVAEPYEHF 790 Query: 749 QELIDYIGQ-----SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA 803 + D + + + + ++ T L + +P + + E + A Sbjct: 791 AAIRDLVPETSVVHWYDGSSADVDEQEDDHDNAVPQRTGLWPHLQVEPGDAETAELVARA 850 Query: 804 RE-------------WLPAASQAGKAH-SEFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 RE W S + H + +P +P + + A F Sbjct: 851 RESLPEYIDGELYGLWERDTSALIEEHLAAASGEVPVMMPGELTASDVVALSADS-EQFA 909 Query: 850 QMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLP- 908 + R P+T R + L +LP Sbjct: 910 RR-----ARRPVPFKPNT------YAKRGTAFHEWLEEFYGARP-------LLTEDELPG 951 Query: 909 --YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGL-- 964 E ++ +LA + G + V D Sbjct: 952 VDEPEVETRTLEKLKNNFER--SHWARRTPAFVEHPFELALGESVVRGRMDAVFMDDNGW 1009 Query: 965 --LRWRPSLLSVAQGMQLWLEHLV 986 + W+ M+ + L Sbjct: 1010 TVVDWKTGTKPAPAQMKSAMLQLA 1033 >UniRef50_A6GBC2 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GBC2_9DELT Length = 683 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 70/546 (12%), Positives = 139/546 (25%), Gaps = 85/546 (15%) Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKL-----LTRQRRHSFEDRELPLFRDSENAGQL 286 + L P D K+ + L D + + Sbjct: 176 RRFTRFLDLVAPIDKVLADFKERKRRLNMVDFDDLLSYWLELLRDPKHASVAEQLRGQWD 235 Query: 287 FNSDGEQDVGNPLL-ASWGKLGRDYIYLLSDLESSQELDAFVDVT--------------- 330 E N L A ++ RD+ L + +Q + +F Sbjct: 236 HMLVDEYQDINVLQGAIIDEMARDHGSLTCVGDDAQSIYSFRGADFSQIYDFRIRHKEAQ 295 Query: 331 --PDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEV 388 P + + IL L NR++A + R + I ++ E+ Sbjct: 296 VLPLTINYRSTPQILSLANRSIARNREQHPKELTAVRKPGATPALIPLR---DVIQQGEL 352 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 + R+L + + +L R + V+ + R +P+A+ Sbjct: 353 VAQRVLELHH-EQSLPLRKMAVLYRNHAHSLEL-----QVELTRRNIPFAVRSGVRFFEQ 406 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 ++ ++ L ++ + L +L I + + Sbjct: 407 RHIKDVVAYLRARENPRDALAWLR-----LLRLWPGIGNRTAERVASVLAGE-------- 453 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 R L A A ++ G + + LA L Sbjct: 454 ----------------FDAFGRRLPVPAGPPAPVPEVLAAESKQAKGRAKDALVTLAKLF 497 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 +L P + + + E A A Sbjct: 498 DRLLEA----GGRNPGRAIEIIVHEHYADYAERSFENADARKEDLDNLANYAGRWEDA-- 551 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + + + + + T+ + + + VV +L + DG +P Sbjct: 552 ---TEFLSELALIEGISAENVVMGDEPDDKLVLSTIHQAKGLEWPVVFVLWLVDGRFPSS 608 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE---RFPS 745 A + +++R LF A A+ LY+ Y PS Sbjct: 609 QA------------LRANAELEEERRLFYVATTRAEDDLYLLYPTIEEGRRGPTTVLRPS 656 Query: 746 VLVQEL 751 + EL Sbjct: 657 RFLTEL 662 >UniRef50_A6VFA5 UvrD/REP helicase n=2 Tax=Methanococcus maripaludis RepID=A6VFA5_METM7 Length = 946 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 74/689 (10%), Positives = 171/689 (24%), Gaps = 136/689 (19%) Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 G ++ L +++ A + ++ + E A R+ Sbjct: 272 GASVENFRQFLERYSGPEKIKAH--------MIKLEENFRSPEEIVDAFDKFMGPHRTFE 323 Query: 364 KRPLDPLDS--SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 K+ + V SP+ E + + + ++ + + DI V+ + +++ Sbjct: 324 KKIISKNGHYSDPVLIVSESPEEESIKIAEWIEKLITKH-NVDYGDIAVLFKSVRNHAN- 381 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR------FVSEDVLALLD 475 +R +PY + + P + + I ++ + + +++LLD Sbjct: 382 ---ELVDELMERNIPYVVYGDSSLIDQPEIRSVIHAMACINEYELNEKVSRNRKLMSLLD 438 Query: 476 VPVLA-ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 +L ++ E+ + L + + ++ G Sbjct: 439 YDILGSDLLNLDEKTVEKLDYRGEPHKFCDVYNYEGLKN-------------------QG 479 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 A + ++ + L+ RR + Sbjct: 480 IATKDIDTLINIKNIRNKDVKKPQ--LDIFYELMDATGYLRRLFEASK------------ 525 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 + +AE ++ I+ + + L + D + Sbjct: 526 -DEADKYNAEKAELQLKNLAKFTTILEKFKKNTGSN--SFKSFIYLLTKIPDNKLEDAAS 582 Query: 655 LAGP--VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 G V I T+ + + F VV L G+ + Y A + ++ D+ Sbjct: 583 PEGQDVVKIMTIHQAKGLEFPVVVLGGVTERRY-GARADDRLVNIPKQFMMNKHDVDFDE 641 Query: 713 --RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 R +F + AQ+ L IS D R S + E+ DY Sbjct: 642 EVRRVFYVGMSRAQKLLTIS-----AIDGRNRKMSKFIGEIGDY---------------- 680 Query: 771 ESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE 830 P + E +P Sbjct: 681 ----------------KFISPSAFTA-------------------TFGEDDHYVPVDEKI 705 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE 890 + ++ + P R + L + +I I L L Sbjct: 706 RMTYSSVNYYMDCPFRFYLYYVLGFVTPEWERQI------------YGSIIHNCLKKLHI 753 Query: 891 QDDAERLFRRFRAAGDLP---YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC 947 + G + + + + ++ +E Sbjct: 754 MMSEGKNISIRDIMGIVDKYCKEENTKKYRNSVIDLVRDYHKNAKEFIGEIVDVERPFTY 813 Query: 948 --NGVQITGWLPQVQPDGLLRWRPSLLSV 974 + + + G V + Sbjct: 814 INSDLVVNGQADLVIRNKNGELCILDFKS 842 >UniRef50_C1ZCN1 ATP-dependent nuclease, subunit B n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCN1_PLALI Length = 1113 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 91/752 (12%), Positives = 201/752 (26%), Gaps = 115/752 (15%) Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGK 305 Y + + + + + D + LL + + Sbjct: 166 EYQALLNARGWYDQEGRSWLARAAVSQGARAPFDQVRLVVCDGFVDFTWIQYELLEQFAR 225 Query: 306 LGRDYIYLLSDLESSQELDAFVDVT----PDNLLHNIQSDILELENRAVAG--------- 352 D + L D +SQ +F P L ++S I L+ V Sbjct: 226 WNADIVITLPDEFASQRNTSFDRSELFAIPRRTLEILKSRIKPLQEIRVHSISTNPDHGA 285 Query: 353 ------VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 + + P RE+E + ++ Sbjct: 286 VPTGIEQLARNLFGNPRIVSRCSTAAGFDAIAAGGPHRELEAVSHQIKKW--RSSGFLAE 343 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 +I+V+V + S + + + +P + +S PV+ L+ L + + Sbjct: 344 EIVVVVRGLASEA----SRWLDHFELAGIPAYAPQASSLESCPVVRWMAQLVKLELNDWT 399 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 S D+ ++ + R L W+ +S Sbjct: 400 SHDLRLVVSSTFFRPAQ-FPSKAKRALLAWLAKSP------------------------- 433 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 +R +L + ++ E + + ++ L L L+ E Sbjct: 434 ASSRKILSLKARERAADPSALTTEKEINHTL------VSQGLETLLRVTEKLSTSHSFEG 487 Query: 587 WLPVCRDMLNAF--FLPDAETEAAMTLIEQQWQAIIAEGLGAQY-----GDAVPLSLLRD 639 W+ + +++ + FLPD+ + A + Q I+ + + + L Sbjct: 488 WIDLWAAIISQWTPFLPDSSNDRADRADWELLQRILRRVSRCRGTWQEPSERLSLQAWWS 547 Query: 640 ELAQRLD-QERISQRFLAGPVNICTLMPMRSIP-FKVVCLLGMNDGVYPRQLAPLGFDLM 697 E+ L + + G +++ R + + V ++G + YP Sbjct: 548 EVEACLSVERSLPPAPSPGMISLIDPAQARFLDSARCVVIVGATEQAYPAADHTNCLYSH 607 Query: 698 SQKPKRG--------DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 +++ + ++ LF + + A + L I+Y + + E FPS V Sbjct: 608 AERQSLIAAGLRLVREEDHSSEETLLFWQLVSMATENLLITYPAINAK-GQELFPSPFVL 666 Query: 750 ELIDYIGQSHYLPGDEA-----LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 D + LP +E R + M ++ G + Sbjct: 667 AACDLFTKDVQLPRHVGSIHVMPEREEIHTRRDLRIVAFEQAMTGHAGWWKTGLLDTTEG 726 Query: 805 EWLPAASQ--------------------AGKAHSEFVQPLPFTLPETVPLETLQRFWAHP 844 + ++ + + + L+ + P Sbjct: 727 QAYRNMARGLPMLQARYRTEGFTEYEGMLNEPALREEFARQYGPEHQFSVTRLELYANCP 786 Query: 845 VRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAA 904 R + + L + R L R L +L+ + Sbjct: 787 FRFWIEEVLGLAPRETKQ-------LSTNYLMRGTALHSALASLLGSGRLALADEAELSR 839 Query: 905 GDLPYGAFGEIFWETQCQEMQ--QLADRVIAC 934 F E + + LA+ + Sbjct: 840 I------FAEHVAVEMQRRAKGSPLAEAMARL 865 >UniRef50_A9KTE6 ATP-dependent helicase/nuclease subunit A n=1 Tax=Clostridium phytofermentans ISDg RepID=ADDA_CLOPH Length = 1377 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 50/395 (12%), Positives = 102/395 (25%), Gaps = 49/395 (12%) Query: 385 EVEVLHDRLLAMLEEDPT---------------LTPRDIIVMVADIDSYSPFIQAVFGSA 429 E + + R+ ++ + RDI++++ + +S F Sbjct: 572 EAKAVAMRIKQLVHGERGFSVTKRNGEEQDLKRCQYRDIVILLRTMSGWS----ETFTEI 627 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +P + ++ ++ L + D+ + A+L P++ ++ E Sbjct: 628 LKQEGIPAYSDTQTGYFQTLEVKTVLNYLRILDNPRQDAPLTAILYSPIV----GLSAEQ 683 Query: 490 LRYLRQWVNESGIRWGIDDDNV--RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L +LR + + I D L + T + E S Sbjct: 684 LSFLRVKPGKGAEKLSIYDAARECALNYLEIQDEVTQPEETQPVYDSIIQADLMYEKSSA 743 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + E L + R E L ++ F+ Sbjct: 744 EKTVSMDKNLIETGEKLKRFFATYDKLREKAIYLPVHEIILEFFKETGYDLFVYAMPGGE 803 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA--QRLDQERISQRFLAGPVNICTLM 665 + Y + L + E V I ++ Sbjct: 804 QRRNNLNLLVQHALSFEESSYHGLFQFIRYIERLLKFEIDYGEAGGLSENDNAVRIMSIH 863 Query: 666 PMRSIPFKVVCLLGM-----------------NDGVYP-----RQLAPLGFDLMSQKPKR 703 + + F VV L GM + G+ P + L K Sbjct: 864 KSKGLEFPVVILAGMGKQFNTMDAREKIVLHADYGIGPECIDYQLRTKCPTLLKQVIKKN 923 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 ++ + AL A++KL + D Sbjct: 924 IVLDNLGEELRVLYVALTRAKEKLIMIGSANDAND 958 >UniRef50_C6P6S9 Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6S9_9PROT Length = 825 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 99/739 (13%), Positives = 202/739 (27%), Gaps = 121/739 (16%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR 308 GD A + + R++S E L + +A Q LA + R Sbjct: 78 GDADAFAAAVQQAYQARKNSTLQLEARLVFELWHAMQSGEELDAGRAYQQRLAKLAEQAR 137 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK-RPL 367 +++L + F+D ++ +L ++ S + + + + Sbjct: 138 QPLFVLRTSDWCALEQRFLDEYA----GRAAVEVFDLRKMDAQWGSLLHESSAGLRSQSI 193 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 L + F S ++E ++ L+ RDI ++ D + Sbjct: 194 ASLGGKLGFFAATSLEQEARAAAMQVRLWLQAGK----RDIAIVAQDR-----VVARRMR 244 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + + A + V L+ S F D+L LL P + A +E Sbjct: 245 ALLERAEIMVADETGWTFATLSVSTVLDRWLTALQSDFYHHDLLDLLKSPFIFADMTASE 304 Query: 488 E--GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 + L Q + + G+ G+ + Sbjct: 305 RKSAVYQLEQLLRKQGVVAGL--------------------------------------E 326 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF-FLPDAE 604 E ++ + + L L ++R L EWL R+ L Sbjct: 327 KFSALVEHETVLHQPLARLRQAAALLEQH-----KKRTLAEWLAALRESLQVLSIDSGLL 381 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 + A + + E + P R LAQ+LD + + V L Sbjct: 382 QDDAGMQLLGALETWQQELTADEGRYRFP--EWRRWLAQQLDTQTYRDNSIDSQVRFTHL 439 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR--DDDRYLFLEALIS 722 R F V LLG + P + + + +R + + L +L++ Sbjct: 440 AATRWRAFDAVLLLGCDADHLPSVADGGRWFNDAVRSSLNLPTRAINAERQRDDLLSLLA 499 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 + +++ ++ S ++ L D + Sbjct: 500 LNDCVLVTWQK--DRNGEAGLLSPYLEILRDLHLLTWGDD-------------------- 537 Query: 783 LHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWA 842 E +Y A + ++ +P V + A Sbjct: 538 -----------LAESELPAYLAAEEARAVELPQSAQPAPVVQKEIIPTGVSISAYNSLVA 586 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD---AERLFR 899 P + + + L++N E E +E + +L E+ Sbjct: 587 CPYQFYARHILRLNELDEVQE-------GIEKRDYGERVHAILQRFHERYPRVSEHSRDT 639 Query: 900 RFRAAGDLPYGAFGEIFWETQCQEM--------------QQLADRVIACRQPGQSMEIDL 945 A + F ++ + Q+ + R D Sbjct: 640 MEVALRQISEEVFADLLQQDFEARAWLARWFKALPAYIEWQMVNEAQGWRYVESESAFDW 699 Query: 946 ACNGVQITGWLPQVQPDGL 964 GV++ G + ++ +G Sbjct: 700 ELEGVRLRGRIDRLDMNGQ 718 >UniRef50_D1BAW5 DNA/RNA helicase, superfamily I n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BAW5_SANKS Length = 1111 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 65/545 (11%), Positives = 131/545 (24%), Gaps = 77/545 (14%) Query: 341 DILELENRAVAGVNIEEFSRSDNK--RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 IL++ N + + + S S+ + + E + + + E Sbjct: 353 AILDVANTTSRPLYLADPDNSLPSLEPRPSAGLGSVHGVYSATVEEEGAAIAEFVAKRWE 412 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 T V+ + +A R LP + + P + ++LL Sbjct: 413 PGTTTA----AVLCRARSQF-----PAIEAALRKRGLPVEVVGLGGLLTTPEVVDLVALL 463 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + + ++ LL P R ++ L L E G R + + Sbjct: 464 EVVHDPSRGDSLMRLLTGP----RLNLGAADLHALASRSAELGRR---NRADRPVEGDVT 516 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ----LNIW 574 + G+ + D G + L G L L L Sbjct: 517 DERSIVDALDDLPAEGWVGPDGRSF------SDAGWGRLRSLAGMLRELRALTYLSLPEL 570 Query: 575 RRGLAQERPLE-EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 + L+ E V + + ++ + A Sbjct: 571 VDRAERALGLDIEMALVAARARDDAPSTRPTADPRGRAHLDAFRDVAATFADT--SQLAT 628 Query: 634 LSLLRDELAQRLDQERI----SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 L L+ +ER V + T+ + + + VV + G+ DG +P Sbjct: 629 LGAFLAWLSTAQQRERGLDRPQGAPDPEAVQLITVHASKGLEWDVVAVPGLVDGAFPSTR 688 Query: 690 A----------------PLGFDLMSQKPKRGD------------------------RSRR 709 L F L + Sbjct: 689 TTGDKGPTSSGWLTGLGQLPFPLRGDARDLPELSLAGADDSAELNARLVDFRERCGEHEV 748 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 ++R L A A+ L ++ PS+ + EL + + + ++ Sbjct: 749 AEERRLAYVAFTRARSDLLLTGAWWRSAT-KPSTPSLFLTELHEAGVLAEFTVAEQPEPG 807 Query: 770 DESEARVKAHLTCLHTR-MPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 + P D E + ++ + L Sbjct: 808 TSNPREDLTPEALWPPVDEPADGPEGSAAEAADGSATLREPLELLRRSRDLVLDALVDVA 867 Query: 829 PETVP 833 Sbjct: 868 QHPAS 872 >UniRef50_A1VZC5 ATP-dependent DNA helicase, putative n=30 Tax=Epsilonproteobacteria RepID=A1VZC5_CAMJJ Length = 676 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 67/527 (12%), Positives = 151/527 (28%), Gaps = 51/527 (9%) Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGK 305 + DI K + L E E N L +S + Sbjct: 168 EIYEDILKEYDNEKKRFNYVDFNDLLINLKDLLKEEKYEFDEILVDEYQDTNTLQSSLIE 227 Query: 306 L--------GRDYIYLLSDLESSQE--LDAFVDVTPDNLLHNIQSDILELEN-RAVAGVN 354 DY + + + F D D + ++ + + A+A Sbjct: 228 AFHSKSLFCVGDYDQSIYAFNGADINIIGGFKDRFKDVKIFSLNKNYRSSRSILALANKV 287 Query: 355 IEEFSRSDNKRPLDPLDSSIT---FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 I R K + + + + + +L ++ +I V+ Sbjct: 288 ILNNERLYPKELIVTRNDEFKAPSLLTFEELFDQYQNIAKMIL-----TSGVSLEEIAVI 342 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 + S A ++ + + ++AF S+L+L + + Sbjct: 343 FRNNSSADGV-----EVALREQGIASVRKGSGSFFESLEVKAFSSMLALVVNPKDIMAFI 397 Query: 472 ALLDVPVLAARFDITEEGL-RYLRQWVNESGIRWGIDDDNVRELE--LPATGQHTWRFGL 528 L+ + + + L + + + I+ +D D L+ Q L Sbjct: 398 HLVQ--YTKGVGGVLAKEIFDALLKLGHGNLIKGFLDPDKNVNLQNHQKRNYQLGLFADL 455 Query: 529 TRMLLGYAMESAQGE-WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE- 586 + + +L + + L A + + L + + L + E Sbjct: 456 EELASETRFKFESEFDAHPILKLSKINDLCARNLEKIYLFLKKAMEIKHSLTLVNLICEN 515 Query: 587 -WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG--LGAQYGDAVPLSLLRDELAQ 643 + + L + + + + + I + L + + + L Sbjct: 516 SFYREICEELATKRATNKAGQVDLLRKSENLEKIETKFNVLKELAKNYSDIYKYYNFLTL 575 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 + VN+ ++ + + F +V ++ + G +P Q Sbjct: 576 GASEMS-----SGKGVNLLSVHASKGLEFDLVFVIDLAQGRFPNQK------------LM 618 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 G +++R LF A+ A+ LY+SY + PS + E Sbjct: 619 GMGGSLEEERRLFYVAVTRAKNILYLSYAKYDKNKKTSFAPSRFLIE 665 >UniRef50_A5N879 ATP-dependent DNA helicase n=2 Tax=Clostridium kluyveri RepID=A5N879_CLOK5 Length = 670 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 46/439 (10%), Positives = 117/439 (26%), Gaps = 97/439 (22%) Query: 322 ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHS 381 + + + + L + + + + + +I F + S Sbjct: 251 DFNRYFEEGQKLFLKKNYRSVYNVVKMSQNLICNNKNRNLKCVESSRMNRGNINFKIFES 310 Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY-AIS 440 + + L + ++E RDI ++ I + + + + Sbjct: 311 EKEQACYLAHIIKQIIEAGK-CRCRDIALLYRTNIECVNIIDS-----LLKNDIKFKFLH 364 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 + SH + + I L E +++++ P I + + +R Sbjct: 365 GKYNFYSHFICKDLICYFKLALDMCDKESFISIVNKPF----RYIGKINIEKVRN----- 415 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 + ++ + + + Sbjct: 416 ------------------------------------NRVKENCFEILKNIEGIPVFQIKA 439 Query: 561 VGHLASLLMQLNIW---------RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + L + +L L + L + + ++ Sbjct: 440 IDKLQRNIKKLRKIKPKERVKFILDKLEYKDYLHKHCEKLASNMEEYYYV----IEQFKQ 495 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 I + + +I + + + L + L +E V + TL ++ + Sbjct: 496 ICEDFTSIYEFLKHVETAE--------EFLHKNLQEE--------DAVILSTLHGVKGME 539 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 FK V ++ N+G P + L + +++R LF + A LY+ Sbjct: 540 FKNVFIINCNEGSIPHSNSIL--------------NNLEEERRLFYVGITRAIDNLYL-- 583 Query: 732 IGRSIQDNSERFPSVLVQE 750 S S ++E Sbjct: 584 CSTSTIKGRAVEVSRFIRE 602 >UniRef50_UPI0001C42BC3 ATP-dependent DNA helicase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42BC3 Length = 785 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 47/455 (10%), Positives = 122/455 (26%), Gaps = 82/455 (18%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL--DSSIT 375 + F P+ + + + + N+ +++ + L D + Sbjct: 398 SDPDYILNFKSDYPEAKVCVLDQNYRSTHPIVESANNVITTNKTRFNKQLHAQHTDENAP 457 Query: 376 FHVCH-SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + E ++ + + + ++ P D V+ + + + S+ Sbjct: 458 VLFFPYDEEEEATMIVNDIKSRIKN--GAEPSDFAVLFRTNVTSRALFERMVTSSL---- 511 Query: 435 LPYAI-SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 P +I SD + + ++ L L + + + L + A F Sbjct: 512 -PISIESDGDSFYRRKAVRKVLAYLQLCINPDNGQAIQDL-----IGALF---------- 555 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + + + L + +++ Sbjct: 556 ------------------------------LKQQVIQDLKALTITEDCSFVEALTHLSGL 585 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETEAAMTL 611 + + L Q+ + E + L + + Sbjct: 586 PNFQQKKLQKLPEQFKQIKK--------KTPVEAIAFIEQEMGLKDYLKKQGNEGNKLDR 637 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG--PVNICTLMPMRS 669 + + + + + ++ +++ A V + T+ + Sbjct: 638 GSDDVRDL-----KVAARQHETIEAFIQHVDHMIAKQEEARKMPAEKTAVQLLTIHRAKG 692 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + +K V +LG N+G P D + GD +++R L A+ A+ L I Sbjct: 693 LEYKHVYILGANEGSLPH-------DYALDAWREGDDKPLEEERRLMYVAMTRAKNTLAI 745 Query: 730 SYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 S ++ S V+E+ Sbjct: 746 SVPT--MRRGKRAHSSRFVREVKKMARTQSKHKIP 778 >UniRef50_C8XJ57 UvrD/REP helicase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XJ57_NAKMY Length = 1106 Score = 149 bits (375), Expect = 7e-34, Method: Composition-based stats. Identities = 98/756 (12%), Positives = 178/756 (23%), Gaps = 111/756 (14%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS--DILELEN--RAV 350 VG+P+ + + G L + L + + +LL + ++ +L L N Sbjct: 319 VGDPVQSIYSWRGASASN-LPRFVTDFPLASGRPSSIRSLLTSFRNPGAVLALANEVSRP 377 Query: 351 AGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL-----AMLEEDPTLTP 405 + + + + + + ++E L + + A+ E TP Sbjct: 378 VRQGGRAVEVGELRPTPAADPGRLRYGLFGTAEQENAWLAEAIAGYWRDALDEGGAGATP 437 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 V+V + A LP + P + ++ L + Sbjct: 438 PTTAVLVRRRSDMADT-----ADALRAAGLPVEVVGLGGLLDEPEVADLVATLRVLVDPT 492 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 + LL AR+ + L + G Sbjct: 493 AGPAAMRLL----TGARWQLGAADLE---ALAARARELAGPARPADGHGAGGPADPTAVV 545 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP-- 583 L + + A L L R L Q P Sbjct: 546 RSAVAAALPVEDIDTWSMVDAAGDLGPAQAYSAAGHRRLVRFAAHLARLRARLNQPLPDL 605 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 + + C + + + + A L D A+ Sbjct: 606 IADLERACHLDVESLVAGTGRAHLDAFAA-------VVAEVAATGAGPAELLEYLDAAAE 658 Query: 644 RLDQERISQRF-LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP- 701 R D + +G V + T+ + + +++V + + +GV+P +Q P Sbjct: 659 REDGLTPGEVPQPSGRVQVLTVHAAKGLEWEIVAVPHLTEGVFPITRGSTWLGDPAQLPP 718 Query: 702 -KRGDRS------------------------------RRDDDRYLFLEALISAQQKLYIS 730 RGDR R ++R L AL A++ L S Sbjct: 719 QLRGDRDDLPQLAWPAGGTQKDLADALAAHAAEFGELRLTEERRLLYVALTRAERTLLFS 778 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL--HTRMP 788 PS ++E + ++ P Sbjct: 779 GHHWGTGLAKPAGPSPFLEECAALARPFAEPDEWAPPPATDEGQQLLPRTAVWPIDPLGP 838 Query: 789 FDPQNYQPGERQSYAREWLPAASQAG----------------------------KAHSEF 820 P +R A L AA + Sbjct: 839 RRPHVQVGADRVLQALADLAAAEPEPVEDRPGTADEVDTGDPFGWAADVTTLLAERSDRG 898 Query: 821 VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQI 880 + LP T+ + +L P RL TE S LSR Sbjct: 899 REVHEVELPGTITVTSLVELADDPAE--LARRLTRPVPTESS----------GRLSRGTD 946 Query: 881 NQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQS 940 L + L A + E + LA Sbjct: 947 FHAWLEHRFRGEALLELSDLPGAGDAWVG---ADPEIEDLKRRF--LASPWADRVPIDVE 1001 Query: 941 MEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 + G+ + G + + D Sbjct: 1002 VPFASRIAGLGVRGRVDAIFADADGGITVVDWKTGH 1037 >UniRef50_B0CJK1 Double-strand break repair protein AddB n=44 Tax=Rhizobiales RepID=B0CJK1_BRUSI Length = 1052 Score = 149 bits (375), Expect = 8e-34, Method: Composition-based stats. Identities = 116/982 (11%), Positives = 241/982 (24%), Gaps = 155/982 (15%) Query: 187 ANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRY 246 A ++ +E+ L +++ P L + L F + Sbjct: 156 ARDLAALMDQVETDGAKWSKL---------TSIAPDD------LADWWRVTLGFLDIVTR 200 Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN------------------ 288 W DI L+ + + + Sbjct: 201 LWPDILAERRLSNPAAHRNDLIRSEVKRLRDHPPAGPVIAAGSTGSIPVTAELISTIASL 260 Query: 289 ----------SDGEQDVGNPLL-------ASWGKLGRDYIYLLSDLES-SQELDAFVD-V 329 + LL + +G LL + + Q++D D Sbjct: 261 PQGAVVLPGLDRDLDEAAWKLLGEAGDNPSIFGHPQYGLHKLLQAIGALRQDVDVLEDMP 320 Query: 330 TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVL 389 L I S+ L A + + I + + E + Sbjct: 321 RAKRLRERIVSEALRPAETTDAWGLLNRDPDMQPSALREAAAR-IDLVEASNEREEALAV 379 Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 L L ++ ++ AD + V G A + S R + Sbjct: 380 ALALRDALADERKTA----ALVTAD----RNLARRVVGE-LARFGIDADDSGGRHLRDVE 430 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 L+ + +LAL+ P+L R R + + R G Sbjct: 431 TATLLRLLVETVFNPGNPVALLALVKHPLL--RLGGARIDRRLAGETLELVAFRGGTGRA 488 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 + +L R L A + Q W + + D L L+ + Sbjct: 489 GILDLPAF----------FERRLKESADQPWQPAWHTTVTQDMIEAARG-LCESLSVAVE 537 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT--LIEQQWQAIIAEGLGAQ 627 L + + + E + L + + AA ++ + + + ++ Sbjct: 538 PLAPFVTANRRTD-IGEIARATVEALENMARDETGSVAAFYSGERGEKLASFLRGLISSE 596 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLAG-PVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 L + E + + I + R + + G+N+G +P Sbjct: 597 AELDFEAMEWPAILDALMAGETVKPHPGGHPRLFIWGALEARLQTVDAIVIGGLNEGSWP 656 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA----LISAQQKLYISYIGRSIQDNSER 742 + F +P + + +R L A + + ++ RS DN+ Sbjct: 657 TKTRNDPFMS---RPMKAMIALDPPERRTGLAAHDFQMALGMDHVVLTRSQRS--DNAPT 711 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 PS +Q L +G G R + Sbjct: 712 VPSRWLQRLETVLGADVTNEMRGR------------------------------GTRFIH 741 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTE-- 860 + A P P+ + ++ P F + L++ Sbjct: 742 WSREIDRAEDVPFVRKPEPAPPVAARPKHFSVTEIETLRRDPYAIFAKKILKLRPLEPLI 801 Query: 861 -DSEIPDTEPFILEGLSRYQINQQLLNALV--EQDDAERLFRRFRAAGDLPYGAFGEIFW 917 D + + L + Q ++ L + L R A DLP ++W Sbjct: 802 RDPAAAERGTLFHDILGHFT--QAAIDPLAPDAAEKLMELGRILFADMDLPL-EIEAVWW 858 Query: 918 ETQCQEMQQLADRVIACRQPGQS-------MEIDLACNGVQITGWLPQVQPDGLLRWRPS 970 + Q Q + ++ G+ ++G ++ Sbjct: 859 PRFTALIPQFLQWERERAYKVQERFAEIASQKREVENLGITLSGRADRIDLMRDGTAEII 918 Query: 971 LLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREG 1030 H++ + L F + +A + G Sbjct: 919 DYKTGSTPSPKQAHVLLS-----PQLALEAALLARGAFLDVGPVRACDL--TYVRLKAAG 971 Query: 1031 MSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWY 1090 P ES ++ + + ++A + Q + E + Sbjct: 972 EVKP-----ESILKI------SRPPSEKTAPALGEEAWQRLAQLLA--EYQKPEK--GYL 1016 Query: 1091 QRLWRQLTPETMEAIVEQSQRF 1112 R + ++ Sbjct: 1017 SRALPFRETDLTGDYDHLARVL 1038 >UniRef50_D1BXK8 UvrD/REP helicase n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BXK8_XYLCX Length = 1192 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 95/724 (13%), Positives = 172/724 (23%), Gaps = 136/724 (18%) Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V+ ++ A R LP + S P + ++LL + Sbjct: 483 AVLCRKRSQFA-----AVEVALRRRGLPVEVVGLGGLLSTPEVVDVVALLEAVHDPSRGD 537 Query: 469 DVLALLDVPVLAARFDITEEGLRYL----RQWVNESGIRWGIDDDNVRELELPATGQHTW 524 +L LL P R ++ L L E R + A + Sbjct: 538 SLLRLLTGP----RVNLGAADLHALGSRAADLAREDDPRRAAGRAHSDGDAPAAPDGGSG 593 Query: 525 RFGLTRMLLGYAMESA------QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR--R 576 ++ G ++ Q + L LA+L L R Sbjct: 594 EADDLAVVEGDVVDHRSLVDALDDLPQPGRAARDGRVLTPAGHTRLAALRSVLRSLRGLT 653 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPD------AETEAAMTLIEQQWQAIIA-EGLGAQYG 629 L+ + + + E + A AQ Sbjct: 654 YLSLPELVVQAERALGLDVEVATADAVATLVPDAGERVSRRGREHLDAFRDVAATFAQSA 713 Query: 630 DAVPLSLLRDELAQRLDQERI----SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 DA L L QER + V + T + + + VV + G+ DGV+ Sbjct: 714 DAATLGAFLAWLGVAQKQERGLDLPVREPDPDAVQVITAHAAKGLEWDVVAVPGLVDGVF 773 Query: 686 P-----------------------RQLAPLGFDLMSQKPKRG-----------------D 705 P L DL + + + Sbjct: 774 PTIAEAANGQRAESAWLTDVAALPYPLRGDDADLPAFRWEAAVDTKELDGLRGEFRAACG 833 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI---GQSHYLP 762 ++R L A A+++L ++ + R S + EL++ Sbjct: 834 EHALAEERRLAYVAFTRARRELLLTAHWWGTSS-TPRRLSPFLVELVEVGLVTADGWTAA 892 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQ---------------------NYQPGERQS 801 D A + + V A + P+ G Sbjct: 893 PDAADSNPRDDVEVTASWPAVDDVEVGSPRDVLRATAALVDAAATDRAAHAVAADGVLVD 952 Query: 802 YAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 A + ++ A + +P V L R + + R Sbjct: 953 AAGHDIVELARILLAERDERSGHEVEMPAHVSASGLVRLATD------RDEFALQLRRPV 1006 Query: 862 SEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC 921 P R + + + A G + Sbjct: 1007 PAEPTV------HARRGTRFHEWVEQQFASSALFDVDDLPGADDGDLPGDADLDVLKE-- 1058 Query: 922 QEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGL--------LRWRPSL-- 971 + L +++ G+ + V D + W+ Sbjct: 1059 ---KFLVSEWADRTPIAVEQDVETPLAGIMTRSRMDAVFADPDGEPGSVVVVDWKTGRPP 1115 Query: 972 ----LSVAQGMQLWLEHLVYCASGGNGESRL-----FLRKDGEWRFPPLAAEQALHYLSQ 1022 A+ +QL + L + G ++ ++ R LA E L Sbjct: 1116 TDTAARAAREVQLAVYRLAWSRWTGLPLDKVSAAFCYVATGETVRPERLATE---AELEA 1172 Query: 1023 LIEG 1026 LI G Sbjct: 1173 LIRG 1176 >UniRef50_B6G1B8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1B8_9CLOT Length = 1256 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 43/407 (10%), Positives = 117/407 (28%), Gaps = 96/407 (23%) Query: 381 SPQREVEVLHDRLLAMLEEDPT----------------LTPRDIIVMVADIDSYSPFIQA 424 + Q E + + ++ ++ +DI++++ +++ + Sbjct: 565 NIQIEARAIGKIIKEIVGKNSDGKIQMVYDKEEKRYRQAKYKDIVILLRATSNWA----S 620 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 V + +P ++ +SLL + D+ +LA+L P+ ++ Sbjct: 621 VLTEEFTNMDIPVYADTGTGYFDTIEIKTIVSLLKVIDNPMQDIPLLAVLKSPI----YN 676 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 T E L +R + + Sbjct: 677 FTPEELIDIR-----------------------------------------IVNRNVSFY 695 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPD 602 +++ Y + L +L+ ++ + +E L A+ Sbjct: 696 EAMKIYASFDDCDN---KKVRDFLERLDDYQER-SSYLSTDELLWYLYNETGYYAYAAIL 751 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ--ERISQRFLAGPVN 660 + + ++ + + ++L + E + A V Sbjct: 752 PAGKQRQANLRILFER-AKQFEDTSFKGIFNFINFVEKLKKSDSDMGEAKTLSENADVVR 810 Query: 661 ICTLMPMRSIPFKVVCLLG---------MNDGVYPRQLAPLGFDLMSQKPKRGDR----- 706 I ++ + + F +V G MN G+ G +++ + + Sbjct: 811 IMSIHKSKGLEFPIVICGGMGKRFNKMDMNRGILYHHELGYGPQVVNLETRLSYPSMMKE 870 Query: 707 --------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 ++ + A A++KL I+ ++ N +++ S Sbjct: 871 AMKKQMVVEMLSEEMRVLYVAFTRAKEKLIITGAVNDVEKNLQKWAS 917 >UniRef50_C6Q0I3 UvrD/REP helicase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0I3_9CLOT Length = 736 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 49/429 (11%), Positives = 136/429 (31%), Gaps = 82/429 (19%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS---ITFHVCHSP 382 F + + +Q++ EN I +++ N + ++ + I F Sbjct: 318 FNEYFKNGKKIFLQTNYRSNENIVDISKKIIVGNKNRNSKIIEANKKTKGIINFFNLSDE 377 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 +++ + + + ED + D V+ + + +P+ I D+ Sbjct: 378 RQQALSICKTIENL-CEDNSYNLEDFAVLYRTNLENRSIV-----DLMLKKEIPFKILDK 431 Query: 443 R-ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 + H V I+ L L E +++ P +++ + +++ +N+ Sbjct: 432 QYNFFEHFVCRDLIAYLKLSLDITDKESFGRVINKPF----RYVSKVHIEKVKKNINK-- 485 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 + ++ ++ ++ + + Sbjct: 486 ---------------------------------------ESCFKILMEIEDLPIFQIKNL 506 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 L + +++LN L + L L + + E + + ++ + +I Sbjct: 507 ERLENDILKLNKM--------SLRDALNFITKDLGYYDYIN-EYSERLKMESRELKDVIE 557 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 E + + + ++ + + +G V + T+ ++ + FK V ++ N Sbjct: 558 EFKASASD-YGSIIPFLAHIEDVEEKLKNKSKEDSG-VILSTIHGVKGMEFKNVFIINCN 615 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 +GV P + +++R LF + A L + ++ Sbjct: 616 EGVIPHINSI--------------PKNVEEERRLFYVGVTRAIDNLTLY--STNMFKGKS 659 Query: 742 RFPSVLVQE 750 S ++E Sbjct: 660 AHMSRFIEE 668 >UniRef50_B2A610 ATP-dependent helicase/nuclease subunit A n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=ADDA_NATTJ Length = 1282 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 86/715 (12%), Positives = 201/715 (28%), Gaps = 123/715 (17%) Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSR---VFICGISALPPVYLQALQALGKHIE 235 + ++L E L+ L R V + + V L+ L Sbjct: 370 KQRGIMDFSDLEHYVYELLDQYPEIVSELHQRYDEVMVDEYQDINQVQNAILEKLTGQQS 429 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLL---TRQRRHSFEDRELPLFRDSENAGQLFNSDGE 292 I +P + GD+K Y +L ++ D+ E +S Sbjct: 430 I-----SPDLFMVGDVKQSIYRFRLAEPELFLNKYDTFDQRSEEGSLIELQENFRSSPMV 484 Query: 293 QDVGNPLLA-----SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN 347 + N L + S + + L +EL D D+ E EN Sbjct: 485 LESVNYLFSRIMTGSLSGIEYNEKVKLIPASKPRELYLNEDDNEDDKYEGQ----AENEN 540 Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED------- 400 + + G + + + +RE +++ + +++EE+ Sbjct: 541 QVIDGRTEVHLLENKDTNSREE-----------DTEREAQLIATTINSLVEEEYRIYDRD 589 Query: 401 ----PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 L D +++ + + VF +P + ++ +S Sbjct: 590 LDDYRKLDYSDFVILSRKTKEQAELVTNVFQE----HGVPLYAELDTGYFAAQEVQVMLS 645 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 LL + D+ + +L P++ + L +R+ Sbjct: 646 LLKIIDNPRQDIPLAGVLRSPLV----GLDSNELVEIRR--------------------- 680 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 + + R+L ++ + + + + QL WR Sbjct: 681 -SNPGTDYYEACKRVLTN--------------SIEQQNQCSEKTIQKMQKFFSQLERWR- 724 Query: 577 GLAQERPLEEWLPVCRDMLN--AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 +++ER L E + + + + + + + + G L Sbjct: 725 RISRERSLAELIWDIYQITDYLDYVAGFPGGRERQANLWSFYDRALQFDSFSHSGLVKFL 784 Query: 635 SLLRDELAQRLDQERISQR-FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 + + + Q D + V + ++ + + F VV ++G+ + Sbjct: 785 NFIEKLVEQDFDLGKARTVSENENVVRLMSIHKSKGLEFPVVFVMGLG-NNFNFNDQKGD 843 Query: 694 FDLMSQK---PKRGD--------------------RSRRDDDRYLFLEALISAQQKLYIS 730 L PK D R ++ + A+ A++KL++ Sbjct: 844 LLLHKDLGLGPKLVDLTNRIKYPTIAHQAIKGSLGRETLAEEMRILYVAMTRAEEKLFLV 903 Query: 731 YIGRSIQDN-----SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 G+ I+ + + +G+ L ++ + + Sbjct: 904 GSGKDIESKISVPEEPAAAQNYLDWIYPQLGEDSELFHK---IWNDIPGQQDGKSVEYNW 960 Query: 786 RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF-VQPLPFTLPETVPLETLQR 839 + F+ Q + E+ +A S + + + + L + Sbjct: 961 KSYFESLLSQTFTWEVDQEEFEDQKRTLEQAISYSYPYNIATEIVGKMSVTDLAK 1015 >UniRef50_C6JEU5 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEU5_9FIRM Length = 1269 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 47/399 (11%), Positives = 110/399 (27%), Gaps = 65/399 (16%) Query: 385 EVEVLHDRLLAMLEED----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 E + R+ ++ ++ ++ DI++++ ++ F A + Sbjct: 561 EALAIAQRIKEIVGKEQIVDKEKKEYRSVEYGDIVILLRTAYGWA----ETFREVLASQG 616 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P + R S + ++ L + D+ ++ +L P++ T + L LR Sbjct: 617 IPVYCTSRTGYFSATEIVTVLNYLKVCDNPLQDIPLMGVLRSPIV----GCTSQELAELR 672 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 ++ + + G + +L + + Sbjct: 673 ----------------IQYPDGLLYESVSAYAGENEIPEKEL--DPDKLKSELLNSNLRT 714 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLI 612 L L L L R +A P+ E + + E + Sbjct: 715 DEKNSLNIKLKGFLSLLEKVRN-MATYTPVHELILYVLKETGYGDYARALPGGEQRFANL 773 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG--PVNICTLMPMRSI 670 + + Y ++L AG V I T+ + + Sbjct: 774 TMLVEKAMD-YEKTSYRGLFNFVRYIEQLQAYQVDYGEVNLTGAGNTAVEIMTIHKSKGL 832 Query: 671 PFKVVCLLGMN----------------------DGVYPRQLAPLGFDLMSQKPKRGDRSR 708 F VV + GM D + P + ++ + Sbjct: 833 EFPVVFVAGMGKQFNFQDMNAGLLLHPELGIGADAIIPEKRVIASSLNKQVIRRQLLKES 892 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 ++ + A+ A++KL ++ + S Sbjct: 893 LGEELRVLYVAMTRAKEKLILTGTV-GKLEKQMMSLSRF 930 >UniRef50_B5GJP0 ATP-dependent DNA helicase n=20 Tax=Streptomyces RepID=B5GJP0_9ACTO Length = 1221 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 70/518 (13%), Positives = 135/518 (26%), Gaps = 54/518 (10%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQ---SDILELENRAVA 351 VG+P A +G G L D +L N + + + A Sbjct: 392 VGDPCQAIYGWRGASVAN-LDDFPRHFPHPDGTPARRQSLSENRRSGGRLLALANDLAAP 450 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + + + + D + + + E++ L DR+ + P +I V+ Sbjct: 451 LRALHDGVEALHAPAGKAADGFVRCALLPTHAEEIDWLADRVAHYVRT--GTDPGEIAVL 508 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 + + +A R +P + P + ++ + + ++ Sbjct: 509 CRTAGDF-----SRIQAALVAREIPVEVVGLSGLLHLPEIADLRAVCEVLQDPGANASLV 563 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 LL P R+ I L L G R + PA G+ Sbjct: 564 RLLTGP----RWRIGARDLALL-------GRRARFLAGGRTGEDDPARRLAAAVEGIDPA 612 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 + ++ + ++ A L +L RR LA + Sbjct: 613 EIVSLADAVDTFVEGGPDAEDGLPFSTGARTRFARLGRELRELRRALADPLMDVLHRVLA 672 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV-PLSLLRDELAQRLDQERI 650 L+ AA + + + L L E+ Sbjct: 673 ATGLDVELSASPNALAARR--RETLGQFLDTAASFAANEPAASLLAFLGYLRTAEQYEKG 730 Query: 651 SQRFLAGP---VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ---KPKRG 704 L G V + T + + + +V + G+ +P F + P RG Sbjct: 731 LDNALPGGENTVKVLTAHKAKGLEWDIVAVPGLVKAQFPSDRGRERFTARASVLPHPLRG 790 Query: 705 DRSRRDD-----------------------DRYLFLEALISAQQKLYISYIGRSIQDNSE 741 D + + + L + L S + Sbjct: 791 DAATLPEVPAWTAKGLKAFQDDMREHQSTEELRLGYVTFTRPRSLLLGSGHWWGPEQKRP 850 Query: 742 RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 R PS + L D+ + H A + Sbjct: 851 RGPSAFLTALHDHCARGHGEIEHWAEPPGPEDENPALR 888 >UniRef50_Q31P32 Putative uncharacterized protein n=2 Tax=Synechococcus elongatus RepID=Q31P32_SYNE7 Length = 1061 Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 78/673 (11%), Positives = 158/673 (23%), Gaps = 145/673 (21%) Query: 382 PQREVEVLHDRLLAMLEE-----------DPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 +E + ++ +++ + DI ++ ++ V+G Sbjct: 476 RIQEATAIAQQIQTWIQQPLLVWDKPSNQHRPIAYGDIAILCRRRAP----LETVYGEVL 531 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 +P ++ + PV +LL + LL P F +++ L Sbjct: 532 NQAGIPVLVNGGGSLLETPVGYDLQALLEFLVYPSNDLALATLLRSPA----FGLSDAQL 587 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 + + + +E PA Sbjct: 588 Y-------QRAQQGKGWWSHRQERPDPA-------------------------------- 608 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 A+ + L R E PL R + L + Sbjct: 609 -------------FAAAIKILEGLLRSRFLESPLRLVQQFDRATGYSAVLASLPQAQRLL 655 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 Q + E A + L +L Q V + TL + + Sbjct: 656 ADWQALLTFLREQPQAHDLEL--LLRYWKQLQQAEVVLPRPVLEAGNAVTLMTLHGSKGL 713 Query: 671 PFKVVCLLGMNDGVYPRQLAPL-------GFDLMSQKPKRGD-----------RSRRDDD 712 + VV + + PR A G L K ++ + Sbjct: 714 EWPVVIIPDLTAK--PRSQAETVLFDTELGVALRQPYVKEQAAAYQFFKYRKQQAEDAET 771 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 R L A+ L ++ S Sbjct: 772 RRLLYVGFTRARDLLLLTSPKS---------------------------------AEARS 798 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV 832 + A P DP + A + Sbjct: 799 PLDLLAPGLEQAAIQPLDPNSGTEIAVT-------ATLPTADAPLFWQSTAAIAPQYSEL 851 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD 892 + ++ P F+ + + L + + L + Q Sbjct: 852 SVSAFADYFRCPALFHFRYTQG----HPGAIDGEGAGTSDRPLQLGLLVHRALELDLRQP 907 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQI 952 +A + + +P + + + +Q ++ ++L+ G+ + Sbjct: 908 EALKPYCAAEDQDLIPQA----LQLASCFATEPVYSAVREQAQQREVTLHLELSS-GLVL 962 Query: 953 TGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEW---RFP 1009 G V D +L ++ + QL L + +W F Sbjct: 963 KGRADLVGADWVLDFKTDQQPQPENYQLQLWAYAAALNRPQAAIAWLRHNQLDWIEIEFI 1022 Query: 1010 PLAAEQALHYLSQ 1022 P AE+A L+Q Sbjct: 1023 PDQAERAAVQLAQ 1035 >UniRef50_C7GAA3 ATP-dependent nuclease subunit A n=2 Tax=Roseburia RepID=C7GAA3_9FIRM Length = 1237 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 59/500 (11%), Positives = 140/500 (28%), Gaps = 90/500 (18%) Query: 385 EVEVLHDRLLAMLEEDP----------TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 E ++ R+ ++ + D+++++ + Y+ F + D Sbjct: 539 EARMIAKRIKELMGTQKVTDKATGELRPVQYSDMVILLRSLSGYAD----RFAAVLNDAG 594 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P S ++ +S+L + D+ + A+L P+ +++E L LR Sbjct: 595 IPAHTVSATGYFSTVEVQTVLSMLRILDNPRQDIPLTAVLRSPI----AGLSDEELAKLR 650 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + + +R+ +E + Q Sbjct: 651 --LKDKNVRF----------------------------YECVLEECERLKQEAEENPGQG 680 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLI 612 +E L + R+ L + P+ E + + + + + Sbjct: 681 RDDSE--EKLYRFYVTYEKLRQ-LVPDTPIHELIELLLKETGYGDYAAAMPAGDRRHANL 737 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ--RFLAGPVNICTLMPMRSI 670 + IA Y DEL + + V I ++ + + Sbjct: 738 LMLVEKAIA-YENTSYKGLFHFVRYIDELQKYDVDFGEADLIGENENVVRIMSIHKSKGL 796 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP-----------------------KRGDRS 707 F VV GM + RQ L + K+ D Sbjct: 797 EFPVVFAAGMG-KNFNRQDTRSRLVLHPELGIGLDYMDGKQRVKSVTIAKRAIAKQIDME 855 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS-------HY 760 ++ + AL A++KL ++ + ++ + +EL+ Y+G+ Sbjct: 856 NLGEELRVLYVALTRAKEKLILTGSLKKAEETLSYIKA-FPEELLSYLGRESAAGYLDWI 914 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE--RQSYAREWLPAASQAGKAHS 818 LP + ++A ++ ++ + + + H Sbjct: 915 LPAAASCQDKYQIRLMRAAELVQEELETQIKDDWNRSACMEKAAQADEKKVQQFSERFHR 974 Query: 819 EFVQPLPFTLPETVPLETLQ 838 + + L+ Sbjct: 975 RYAYENDVQRKNKYSVSELK 994 >UniRef50_Q896L9 DNA helicase II n=2 Tax=cellular organisms RepID=Q896L9_CLOTE Length = 698 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 59/554 (10%), Positives = 158/554 (28%), Gaps = 99/554 (17%) Query: 228 QALGKHIEIHLLFTNPC-RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 Q + HI+ L + C Y L + + + + N + Sbjct: 177 QRIDNHIDEKLFYE--CYDEYERYKSLKNKLDFDDIQIKCRELLVNNSEILNECRNKFKY 234 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLL------HNIQS 340 D QD + L+ L +D + + + Q + +F P+ ++ H + Sbjct: 235 LLIDEFQDCDHMQLSILKMLNKDN-SIFAVGDEDQCIYSFRGAKPEGMVDFPRYFHQGEK 293 Query: 341 DIL--------ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR 392 L + + + I + S + + I + ++E + Sbjct: 294 IFLKINYRSGENIVELSKNLIKINKLRSSKEIFTYNKFEGKINIIYSEDEKEQIENILKE 353 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR-ARQSHPVL 451 +L +E+ +DI ++ I + + ++ + +H + Sbjct: 354 VLYNIEK-KGYNFKDIAILYRRNTEALIII-----DYFLRNNVEFNLNQKYFNIYNHFIC 407 Query: 452 EAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 +S + L +++ P I++ + L+ + + Sbjct: 408 NDILSYIKLSLDNKNRHSFTRIINKPF----RYISKTHIEKLKGFRRKDNCF-------- 455 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 ++ S L + + L + ++ Sbjct: 456 ----------------------------------DIMCNLNISLLQIKTIKALKRNINKI 481 Query: 572 NIWRRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 + L ++ ++ + + ++++ E + I + + + Sbjct: 482 ----KKLDIDKIVDYIMKDIGYEEYIHSYSKKLKIDEEELLYIVYVLKKALEDF------ 531 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 L + + + + + + ++ + + FK V ++ NDG P Sbjct: 532 --TSLEDFIRYIE---ESKNKALEKKENAITLSSIHSSKGMEFKSVFIINCNDGNIPHNS 586 Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 D+ + +++R LF AL + L + S S ++ Sbjct: 587 NVND---------LEDKFKLEEERRLFYVALTRSISNLNLCIC--SNIRGKYLPYSRFLK 635 Query: 750 ELIDYIGQSHYLPG 763 E + S+ Sbjct: 636 ECNLNLKDSYNTDE 649 >UniRef50_P12954 ATP-dependent DNA helicase SRS2 n=7 Tax=Saccharomyces cerevisiae RepID=SRS2_YEAST Length = 1174 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 63/445 (14%), Positives = 127/445 (28%), Gaps = 49/445 (11%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 IL + N +R+ + D + + + E L LL + Sbjct: 319 ILNTSEILITQQNKGRQNRAPLRAQFDLDFPPV-YMNFPAYFLEAPSLVRELLYLKALPN 377 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 T D ++V I+ + SA + +PY I + A ++LL L Sbjct: 378 LFTFNDFAILVR----QRRQIKRI-ESALIEHRIPYKIIRGHSFWDSKETRAMLNLLKLI 432 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE-----SGIRWGIDDDNVRELEL 516 S +LA L P + ++ ++ S + D + + + Sbjct: 433 FSPNDKHAILASLLYPA----RGLGPATGEKIKNALDTLATDVSCFQILKDISSKKIMLD 488 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP-YDESSGLIAELVGHLASLLMQLNIWR 575 T + M+ + + +D+ L +L + N Sbjct: 489 IPTKGRSVIADFISMIENCQLLLQSTLLGGLSDLFDKLYELSGLKYEYLYKDGKKKNDQL 548 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 ++ L + N F +++E++ + +A E + + Sbjct: 549 EK-SEPNLLNARHKNIELLKNYFLALLSKSESSDKEKNEAIKAATDEAEPIE-NKVITPK 606 Query: 636 LLRDELAQRLDQERIS--------------QRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 L + +R G V I T+ + + + VV + G Sbjct: 607 EYLRNFFNSLSLHSDAAEEEESESNKDAKIKREKNGFVTISTIHGAKGLEWPVVFIPGCE 666 Query: 682 DGVYP-----------------RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 +G+ P Q + D++R +F A A+ Sbjct: 667 EGIIPCVFNDDKKDESEEDEEEDQENSKKDASPKKTRVLSVEDSIDEERRMFFVAQTRAK 726 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQ 749 LY+S + R S + Sbjct: 727 YLLYLSNTVTVEDVDRPRIASRFLT 751 >UniRef50_D2RKU1 Exodeoxyribonuclease V n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKU1_ACIFE Length = 1116 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 85/724 (11%), Positives = 169/724 (23%), Gaps = 127/724 (17%) Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 + + A S T C Q E + + + ED L Sbjct: 439 DSRSDVTAQPLHPHQPSSRKPVFAVLKKGECTLEEC--QQAEGRYVAQAIRQL-REDTGL 495 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 + +++ I + + A + +SD + + +ISLL+ + Sbjct: 496 PYGQMAILLPAI-----HLSRQYEEALTALGIKSQVSDGKGFYERQEVVDWISLLTFLLN 550 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGL-RYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + L P I++ L L+ W + + + LE P Sbjct: 551 PRKDWALAGFLRSPY----AGISDRQLTDLLKPWPE-----LSLWESLRQSLEEPFVTLS 601 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 L R L ++ +Q + + LA+ Sbjct: 602 RKLEALHRTALFQSLPELMDAFQEAFAVEPTLLAQRGGREKLANF--------------- 646 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 R + + D +T + + Sbjct: 647 ------RKLRALGVKGAMEDGDTARDFLDRLNLMRRL----------------------- 677 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV------------------ 684 + +Q V I T+ + + F V L ++ Sbjct: 678 -SARESAANQEADPEAVQIMTIHKSKGLEFPAVFLPDLSKKNHNDTLGIQFLPGQGFGVR 736 Query: 685 YPRQLAPLGFDLMSQKPK-RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF 743 P L + + K R R + + A+ A++ LY+ I R Sbjct: 737 VPDAQGNLLETSVYTRLKGEKARLERAEKQRQLYVAMTRAEKYLYL--INVDESKEGSRP 794 Query: 744 PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA 803 P ++ + + G D + V L T P + + Sbjct: 795 PDPDKEKWGQSLQRVFAPEGPHGDQMDWEKLDVAEILENQETGQPGAGEAF--------- 845 Query: 804 REWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE 863 A + +P+ + L + P ++ + D E Sbjct: 846 --------VLDPAVYDRGRPVTVPRDLELSASALLEYDTCPRSFYYHYFRHM--PGIDPE 895 Query: 864 IPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDL-PYGAFGEIFWETQCQ 922 + + ++L L E+ + E L + Sbjct: 896 TVGEGSHRISAIDLGTYVHRVLELLQEEPEEEALAEALEVLDRTGAEKKVFAREGRKLVE 955 Query: 923 E--MQQLADRVIACRQPGQS---ME-IDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 + L + + + L G + ++ R Sbjct: 956 QYCASPLYQELKDLPAQAERDFALPLFQLEQGRAVFQGSVDRLVTLPDGRLGIVDYKTGH 1015 Query: 977 ------GMQLWLEHLVYCASGG---------NGESRLFLRKDGEWRFPPLAAEQALHYLS 1021 Q + L A FL+ W E+ L Sbjct: 1016 PPTDGEEKQGYTRQLTIYALAAEILYPGQKVAWARLHFLQDCSSWELKDREQEE--EKLK 1073 Query: 1022 QLIE 1025 L+E Sbjct: 1074 ALVE 1077 >UniRef50_B5IF83 UvrD/REP helicase domain protein n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IF83_9EURY Length = 927 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 83/828 (10%), Positives = 206/828 (24%), Gaps = 147/828 (17%) Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 P + L+ + ++ + T Y + + L + ++ + Sbjct: 187 PEFYDVLEKYEEALDSYHRLTFGRLIYLA-VNKIKEEPEKLPKISHLIVDEYQDINHAQE 245 Query: 281 ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS 340 E + + VG+P + G D D + + ++ + Sbjct: 246 ELIKLIGKNANIMVVGDPRQTIYQWRGSD-----DQCFERFVTDLY-PDAENIVIPENRR 299 Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 + + E + ++ + + + + +P E + +++ ++ + Sbjct: 300 SGKNIVTVGNTVADKFENRKFEHMISIKERNGYVYVILPETPDDEARWIANQIQKLV-NE 358 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 L D +++ + + VF +PY + A L + Sbjct: 359 KGLKYSDFGILLRSVGTSGDPFIKVF----KGMGIPYIVGGTIGLFRREEAMAVGKLFNW 414 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 ++ + ++ + L W++ +G+ G D ++++ L Sbjct: 415 LYDGGFFKNYR-----GKVTEYDELVDSALD---DWISATGLLEGEDRNDLKAKLL---- 462 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQ--SVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 W+ + ++ D + + A ++ +L L + L Sbjct: 463 --KWKMDVYSGTYPNFQDAYHALLNILDFKKLDPENKIHAAIMANLGRFSNLLGDYENAL 520 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 W I Y + + Sbjct: 521 RLGGNKLTW---------------------NKSNLNGLMWYINLYATTAYEEQLS----- 554 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA-PLGFDLM 697 V I T+ + + + VV + + +P L+ Sbjct: 555 ------------EDIRGIDAVQITTIHQAKGLEWSVVFIPSLVSRRFPSSHVGEHKEWLI 602 Query: 698 SQKPKRGDRS--RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 S++ R + DD+R L A+ A+ L +S N + S ++E++ Sbjct: 603 SRELFPASRYDLQMDDERRLLYVAVTRAKSTLVLS--AFRRITNKVKI-SPFLEEILIEC 659 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 + + + + + + + ++ Sbjct: 660 PKIIKAISANSDVILDVDYEGTS---------------GEDNDIYTFDAG---------- 694 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 + + P + E L Sbjct: 695 --------------------EIVDYTKCPYFYRLRHI------WNYEAPLAEE------L 722 Query: 876 SRYQINQQLLNALVEQD-----DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR 930 + L VE + + LPY + + + L + Sbjct: 723 GYGKALHYCLRRAVEIHKNGLNPFSAILTAVKKDFYLPYAP-SHKAEKMKEGAQRMLLEY 781 Query: 931 VIA-----CRQPGQSMEIDLACNGVQITGWLP-QVQPDGLLRWRPSLLSVAQGMQLWLEH 984 V ++ ITG + + + R S + Sbjct: 782 VANNLNDIESVAEVEYRLEFPQKNSTITGKVDVIIDRGENVEVREYKTSTKVTKPHHVAL 841 Query: 985 LVYCASGGNGESRLFLRKDGEWRFP-----PLA-AEQALHYLSQLIEG 1026 V+ + G + K P+ +E AL + EG Sbjct: 842 QVHLYALGLKGLGYKVGKGSVVYLSESRIDPIDVSEDALANARKYAEG 889 >UniRef50_A8L2I8 UvrD/REP helicase n=6 Tax=Actinomycetales RepID=A8L2I8_FRASN Length = 1135 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 97/700 (13%), Positives = 182/700 (26%), Gaps = 110/700 (15%) Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR-ARQSHPVL 451 LL + + D+ V+V + +P +++ P Sbjct: 356 LLRREHLENGVDWDDMAVLVRSTAPLG-----LLRRVLTAAGVPVSVAGGELPPAREPAA 410 Query: 452 EAFISLLSLPDSR---FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES-------- 500 ++ L D E ALL P+ GLR L + + Sbjct: 411 ALLLTALRCADDPAVQLTPETARALLTSPL----GGADPAGLRALGRELRAHDAAARAAA 466 Query: 501 ---------GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL-PY 550 D + A + +LG SA+ ++V P Sbjct: 467 RAAARGTAARGTTARDSTARDAVGPIALPEPRSAPEADGSVLGLPASSAELLREAVADPE 526 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM------LNAFFLPDAE 604 + EL + L L R L + E+ L L Sbjct: 527 RVLLAVPDELAAPVRRLGRLLRTVRAELRRGAAPEDALWTLWTASEWGPRLERASAVGGP 586 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPL---SLLRDELAQRLDQERISQRFLAGP-VN 660 + A+ S++ + Q++ E R V Sbjct: 587 AGRSADRDLDAVVALFDAVGRLGERRGPGFGVSSVVEELTRQQIAPETAQARAGRPATVR 646 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ---------KPKRGDRSRRDD 711 + T + + ++VV + G+ DGV+P Q +P R D Sbjct: 647 LLTAHRSKGLEWEVVVVCGVQDGVWPDLRQRHTLLGAEQLDSPRNGGVRPPRTREELLAD 706 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 +R LF AL A+++L ++ + + D PS + EL E++ Sbjct: 707 ERRLFYVALTRARRRLVVTAVDGADDDGE--QPSRFLAEL---------GVQVESVRARP 755 Query: 772 SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET 831 L R+ DP+ + R AA+ + P Sbjct: 756 PRPLTLVGLVAALRRLTVDPEASAAMREAAGVRLAALAAASDETGRALVPAAHPDRWWGL 815 Query: 832 VPLETLQRFWAHP------------------VRAFFQMRLQVNFRTEDSEIPDTEPFILE 873 + + + P +R F + Sbjct: 816 LDVTSSDVPVVAPDAPIRLSGSSLSGLSSCGLRWFLEHEANAAEPASP------------ 863 Query: 874 GLSRYQINQQLLNALVEQDDAERLFRRFRAAGD-LPYGAFGEIFW-ETQCQEMQQLADRV 931 ++ L + + RL + F + E + ++ R Sbjct: 864 AQGFGKVVHALADEVTTGRTEARLEALDARLDLVWRHLEFDSRWRSEQERAAAREALGRF 923 Query: 932 IACRQPGQSMEI---------DLACNG--VQITGWLPQVQPDGLLRWRPSLLS------V 974 + + E+ D+ G V++ G++ +V+ D R Sbjct: 924 LEWHAAQRGREVVASEVRFSCDIEVAGRVVRLRGFIDRVELDDAGRVHVVDFKTGRTPPS 983 Query: 975 AQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAE 1014 + + + Y + G L + PP E Sbjct: 984 RRDLATHAQLGSYQLAVREGALDPVLDEAARRHDPPAPGE 1023 >UniRef50_C8NLR2 Helicase n=5 Tax=Corynebacterium RepID=C8NLR2_COREF Length = 1024 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 93/741 (12%), Positives = 178/741 (24%), Gaps = 111/741 (14%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFH 377 + Q + F PD LL + + L + SI Sbjct: 274 DPEQSVFHFRGANPDFLLDFEANRSIHLGEGRRTPLI------------------SIAVT 315 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 S ++L D + D + DI V+V +P +P Sbjct: 316 ETASAHN--DLLADTVRRAHLLD-GVDWSDIAVIVRSAGMIAPV-----RRVLLAAGVPV 367 Query: 438 AIS-DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 IS ++ A I L ++ LL Sbjct: 368 HISPTDVVLSEQRIVAAMILGLRALTEELTPLELEDLL---------------------- 405 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 G G D +R L G R + + +L + + Sbjct: 406 ---LGPIGGADPVTLRRLLRGLRQAEMRADGHRRAIEVLRGLLNTDADEELLAF--LTDR 460 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV--CRDMLNAFFLPDAETEAAMTLIEQ 614 EL+ + S+L G + E L L+A L + Sbjct: 461 ELELLERVRSVLRAGREAMAGGSTEEILWAVWEATGLSSHLSAVSLRGGAAGSQADRDLD 520 Query: 615 QWQAIIAEG-LGAQYGDAVPLSLLRDELAQR--LDQERISQRFLAGPVNICTLMPMRSIP 671 A+ + + ++++ R + V + T Sbjct: 521 AIMALFDAAGDYVERYPTAGIRSFIVHISEQELPTGVRERRGVSPEAVTVTTAHATTGRE 580 Query: 672 FKVVCLLGMNDGVYPR-------QLAPLGFDLMSQKPKRGDR-----SRRDDDRYLFLEA 719 ++ V + + +G +P DL+ + R ++R LF A Sbjct: 581 WRHVIVAEVQEGSWPSLGETGTLLGQEELIDLLDENIDPDTIISRSVDRLAEERRLFHVA 640 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 A +L ++ + D R PS ++EL + + Sbjct: 641 TSRACDQLLVTAVNTPDSD-EVREPSRFLEELAEAHRVEITHIEGPGETPLAEPEVLGHR 699 Query: 780 L------------TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT 827 L + + A +P A Sbjct: 700 LLSVPALVAELRRVVTDPGELGSRRRQAARQLNRLAGAGIPGADPDTWLALREPSTTAEL 759 Query: 828 LPET---VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL 884 +PE + ++ P+RA D+E + R + Sbjct: 760 IPEGRVWLSPSRIEALMNCPLRASLDRL-------------DSEDETPIAMLRGTLVHAF 806 Query: 885 LNALVEQDDAE---RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR--QPGQ 939 A+ D E + E + + + + + R Sbjct: 807 AEAVARGADPERAGEMVTEAYMDLANVPSWSRETTEQDFRRTITRTHTWLQTSRVTFDLV 866 Query: 940 SMEIDLACN---GVQITGWLPQVQPDGLLRWRPSLLSVAQ---GMQLWLEHLVYCASGGN 993 E+++ V I G + +++ + L + + EH + Sbjct: 867 GTEMEVEVGISTEVGIRGRMDRLERNHAGELVIVDLKTGRQAAVQKDMGEHAQLASYQLA 926 Query: 994 GESRLFLRKDGEWRFPPLAAE 1014 + E P E Sbjct: 927 LSRGVLHGDRVEDPAPGETPE 947 >UniRef50_D1U5K5 UvrD/REP helicase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5K5_9DELT Length = 715 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 47/489 (9%), Positives = 119/489 (24%), Gaps = 105/489 (21%) Query: 323 LDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVC 379 + F + + ++ + ++ I + D Sbjct: 267 IMDFPKIFEGTKIIRLEKNYRSVQPILDLTNEILSGAAIKFDKHLYSDLKSDVLPQVVYP 326 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 S Q + + + +L + D+ V+ + + A L Y Sbjct: 327 LSDQTQARLTVEHILDL---GRKYALHDVAVLFR-----AGYQSFPLEVALTRVGLDYQK 378 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 ++ ++LL L + + I + + + + Sbjct: 379 FGGIRFHEAAHIKDVLALLRLVVNPHDLMAWQR-----AVEHVKGIGPKTVARIYR---- 429 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 AM + ++ + + Sbjct: 430 ------------------------------------AMHTDDAKYMATITKKHDE----- 448 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETEAAMTLIEQQWQ 617 L LL +L+ R + + E + +++ + + +A + + Q Sbjct: 449 ----LRELLNELDGLRAMAGRPSAILERILAFYQPILIDKYPDDYPKRQAGLEQLGQIAH 504 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 LD + ++ V + T+ + + + V + Sbjct: 505 NYTD-MDQLLGD-------------LSLDGDPDDEKRKENAVVLSTIHSAKGLEWSAVII 550 Query: 678 LGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS-----YI 732 + + + +P + A +++R L A A++ L + Y Sbjct: 551 IDLVEERFPSRKAMQR------------PEDLEEERRLMYVACTRAKECLTLFVPSSVYN 598 Query: 733 GRSIQDNSERFPSVLVQELIDYIGQSH------YLPGDEALNCDESEARVKAHLTCLHTR 786 +S + PS V EL + L ++ S Sbjct: 599 RQSGISD-PTLPSPFVLELPSTVFTPLKESYGGSLEKRWPVDSRPSFGTAAKSAVREQDA 657 Query: 787 MPFDPQNYQ 795 P + Sbjct: 658 QPVQARPAA 666 >UniRef50_B9DZK4 ATP-dependent helicase/nuclease subunit A n=13 Tax=Clostridia RepID=ADDA_CLOK1 Length = 1238 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 49/390 (12%), Positives = 109/390 (27%), Gaps = 85/390 (21%) Query: 385 EVEVLHDRLLAML-------------EEDPTLT---PRDIIVMVADIDSYSPFIQAVFGS 428 E ++ ++ ++ +E +DI++++ +++P F Sbjct: 550 EARLVASKINELVNPSLDQYSFKVYDKEIDNYRSIMYKDIVILMRATQNWAP----AFVE 605 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + +P ++ ISLL + D+ +ALL P+ + E Sbjct: 606 ELNNSGIPVFADTSVGYFQAIEIKTIISLLQIIDNPLQDIPFIALLRSPI----GGFSPE 661 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L LR E + LEL +++ R+ Sbjct: 662 DLIDLRVVNREISFYEILKAIKEHSLEL----KYSLEHIDERLEY--------------- 702 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE--WLPVCRDMLNAFFLPDAETE 606 + +L +WRR + P++E W F Sbjct: 703 --------------KVEQFFNKLCLWRRKV-IHMPIDEFIWHIYIETGYYGFVGAMPGGI 747 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPVNICTL 664 + ++ + Y ++L ++ V I ++ Sbjct: 748 QRQANLRMLFER-AKQYKNISYKGLFNFINFINKLKSSSTDMGNAKILGENENVVRIMSI 806 Query: 665 MPMRSIPFKVVCLLG------MND-----------GVYPR-----QLAPLGFDLMSQKPK 702 + + F V+ L G + D G+ P + + + Sbjct: 807 HKSKGLEFPVIILSGAGKRFNLTDINKSVLFHKELGLGPEYVNSERHISYPTIVKQVLKR 866 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYI 732 + ++ + A A++KL I+ Sbjct: 867 KLKMETLSEEMRILYVAFTRAKEKLIITGT 896 >UniRef50_D1C5W7 ATP-dependent nuclease subunit B-like protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5W7_SPHTD Length = 1066 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 80/612 (13%), Positives = 159/612 (25%), Gaps = 86/612 (14%) Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 + D ++ P REV + + ++ V+ + Y + Sbjct: 265 HPAGGTEPDGTVRLVSAPDPAREVREAAR--ACLAWAAEGIPFHEMAVVFRRDEPYRALV 322 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD--VPVLA 480 VF + +P + R HP ++LL+L S V+ + A Sbjct: 323 DEVF----RETGIPVYLYGGRPLAEHPQGRRLLALLALAGSPLRRAAVMEFITETHLPDA 378 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 E+GI G D + R +LG E Sbjct: 379 TAERYGPVEPALWDALSREAGIVEGRDQW--------ISRLSLLHQAKRRAVLGEEQEDP 430 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + DE E + L+ + + + L RD+ + Sbjct: 431 ERI-------DERLRTELEAIERLSQFIKDFADQLEARPEHASWQAHLDYLRDLAVTYVD 483 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP--LSLLRDELAQRLDQERISQRFLAGP 658 AE + + A++ + ++ V L D+ + F Sbjct: 484 -RAEPLLDLLAPLARLDALVPQVSFVRFQRTVRRVLERADAGTVLGPDEVPPNGHFGRDG 542 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 V + + +R + + V +LG+ + +P L ++ + R + Sbjct: 543 VAVLDVFSLRFLRLRAVAVLGLAERSFPAPPRQDALLLDRERVRLSAAGRWEIP------ 596 Query: 719 ALISAQ-----------------QKLYISYIGRSIQDNSERFPSVLVQELIDYI-GQSHY 760 + A ++L +SY RS D PS + + + G+ Sbjct: 597 --LRAAGADPEPLLFALAVAAAGERLLLSYP-RSGGDGRTILPSHFFRAAAEALTGRRVG 653 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF 820 + ++L+ + Y +E ++ + Sbjct: 654 VEDIDSLSRELFTRVPTNRFGAATPEEALTAGEYDRTLLALLPQEGAECLARLHPPFARA 713 Query: 821 VQPLPFTLPET--------------------------VPLETLQRFWAHPVRAFFQMRLQ 854 + L+ + P R F L+ Sbjct: 714 RAAWEARWRGRELTTYDGVLGEAAAAAVARRAGLRRAISPSRLETYATCPFRFFLSYLLR 773 Query: 855 VNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE 914 + E + E L R + +L + + A R R L Sbjct: 774 LEPVEEPDLLERIE-----SLERGALVHDVLQRFLTECGANDPPSRVRREAHL--ARLRA 826 Query: 915 IFWETQCQEMQQ 926 I E Q+ Sbjct: 827 IAEEECADREQR 838 >UniRef50_C5DG97 KLTH0D03498p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DG97_LACTC Length = 1090 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 65/457 (14%), Positives = 121/457 (26%), Gaps = 64/457 (14%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 IL + R K D + + E L +L + Sbjct: 311 ILTTSEMLIKQQLSGREDRLPLKAQFDSDFPPVYI-EFPAKFLEARALAREILYLRSLPK 369 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 ++V P ++ + +PY I + RA + + LL Sbjct: 370 LWNYNSFALLVRHRRQIRPL-----ETSLIEHRIPYKIVNGRAFWELKEINGLMDLLKCV 424 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 S + +L L P + +R + + + + V A Sbjct: 425 YSNYEKNAILRALQYP----NRGLGPATVRKVEATFADYESPFVALKNIVANPNNGAYAS 480 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL------------- 568 + L + E + E + E G L Sbjct: 481 KALNVITEFLSLIESCRELMAEATDLSAMTEIFDKLYEGSGLKFEYLHVDGKRKAEVDPN 540 Query: 569 ---MQLNI-------WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT--LIEQQW 616 LN R+ LA +P EE L + + E Sbjct: 541 GEPNLLNKRHINVNILRKHLANFKPFEEDLSQRQGPGDDEVDVKEEDTDVEGKINAHDIL 600 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 + I V S + ++ ++ + +R G V I T+ + + + VV Sbjct: 601 REFINSVNLYSTETEVEESQMSEK-----ERRQKKKREKDGFVTISTIHGAKGLEWPVVM 655 Query: 677 LLGMNDGVYP----------------------RQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 + G +GV P G + R + D++R Sbjct: 656 IPGCVEGVIPCVFGGKDDADDSDSATDGGEEGNNRGNNGTSSPKKNRPRRNEGTLDEERR 715 Query: 715 LFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQ 749 +F A A+ LY++ + ++ PS + Sbjct: 716 MFFVAQTRAKFLLYLTATNSNDTESRYESSTPSRFLT 752 >UniRef50_B1I493 ATP-dependent helicase/nuclease subunit A n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=ADDA_DESAP Length = 1230 Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 57/487 (11%), Positives = 123/487 (25%), Gaps = 97/487 (19%) Query: 383 QREVEVLHDRLLAM--LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 QRE ++ + + L + T+ RDI+V++ + + + +P Sbjct: 561 QREARLVAGIIRRLAGLGGECTVPYRDIVVLMRATTGKAG----TYLEEFRRQNIPAYAK 616 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 +E +SLL + D+ + +L P++ + L +R Sbjct: 617 VGTGYFEAVEVETVLSLLKVIDNPHQDIPLAGVLRSPLV----GLGAAELAAVR------ 666 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 + +++V+ G L Sbjct: 667 -----------------------------------LADKEGDFFRAVVAAAGQGG---RL 688 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 LA L +L WR + V R ++ A + Sbjct: 689 GAVLAGFLERLEKWRSQARCGSLADLIWDVYRTTGYYDYVGGLPGGAGRQANLRALYDRA 748 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPVNICTLMPMRSIPFKVVCLL 678 + + + L + + V I ++ + + F VV L Sbjct: 749 RQYEATAFRGLFRFLRFIELLQEGGQDLGPAPALAESENVVRIMSIHQAKGLEFPVVILA 808 Query: 679 GMNDGVY----------------------PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 M Y P +R R + ++ + Sbjct: 809 DMGRRFYMPDLNGEVLLHKDLGLGPYFVDPGARVSHPTAAWHVVRERLRREQLAEEMRIL 868 Query: 717 LEALISAQQKLYIS------------YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 A+ A+++L ++ + + D + +L Sbjct: 869 YVAMTRARERLILTGSAGRLEQAVLRWSHAAAGDGETLP-------VPVLAEAESFLDWV 921 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 + + L P++ E + E L A+ A + ++ L Sbjct: 922 MPVLMAHPDGEPLRRLAVRSRPAAGTPKDRSRWEVHLHRPEDLEEAAGADPDTAAVLESL 981 Query: 825 PFTLPET 831 P Sbjct: 982 RRLAPIP 988 >UniRef50_A2ST32 ATP-dependent nuclease subunit B-like protein n=1 Tax=Methanocorpusculum labreanum Z RepID=A2ST32_METLZ Length = 915 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 76/646 (11%), Positives = 193/646 (29%), Gaps = 80/646 (12%) Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS-----AP 430 + + E+ + + A++ + + P+DI ++ + S P + + Sbjct: 205 VYQYTDTRTELRSALESIAALI--ESGVPPKDIALLTPSLPSALPLLDELVPDFSVLLEG 262 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 R L + + ++ P + ++ L+ +D+ +++ P F + ++ L Sbjct: 263 TRRPLGFFAGEDIPIENLPPVRCALAWLAAFAFDCRIDDLKIIIESPY----FSLKKDWL 318 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 R + ++GI + G+ WR R+ + Sbjct: 319 TAGR--LEKAGI-----------ITKTEKGRAAWRTVAERL--------------AAARK 351 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 E A L LL +L+ L L + L+A + + Sbjct: 352 KEIGEHDAAFQASLDRLLDRLD---ENLEHTGTLAGHCRALKADLSALGWTKIQMKPQDE 408 Query: 611 LIEQQWQAIIAEGLGAQYGD-AVPLSLLRDELAQRLDQERISQRFLAGPVNI-CTLMPMR 668 + ++ + + + + L++ ++ + L + Sbjct: 409 AARHAFLRLLDKLALTSLAEVSYTVREFYAMLSRFCEKTTKISYPESKHAFFAGDLRSVA 468 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD---RSRRDDDRYLFLEALISAQQ 725 V + G++ PR A + + + ++ D RY F A ++A++ Sbjct: 469 GTKRPYVFITGLSADRIPRIEAAIPLLNAQETARIQPDRVQNLLDASRYYFHAAGLAAEK 528 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 +L +S G + PS + L + +S + A Sbjct: 529 QLILSCAGHDGE--KSLTPSPYLTRLAEPEPKSPGFLAHSMTANQTRAGELLAAGRENEC 586 Query: 786 RMPFDPQNYQPGER----QSYAREWLPAASQAGKAHSEFVQPLPFTLPE--TVPLETLQR 839 F + + ++ R P A A + E L+R Sbjct: 587 EGLFGIPSLETAAEIIGIETVDRTGTPGIYDAEFAGDGIAEAFAAAYTEKTEFAPTVLER 646 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEI-PDTEPFILEGLSRY------QINQQL---LNALV 889 + P + + L++ + S + + + R+ + ++ + Sbjct: 647 YRECPFKWYLADHLRLENPADFSAERIIVGTVMHKAMERFFREYMSPLTEENESDAAEFL 706 Query: 890 EQDDAERLFRRF---RAAGDLPYGAFGEIFWETQCQEMQQL----ADRVIACRQPGQSME 942 ++ E R + + G G E+ C + +L + Sbjct: 707 KKLVTEEFKNRHIKTPSWQSMLNGYLGNGGLESSCDLIIRLETGFYAAGFRTLPEWLEQK 766 Query: 943 IDLAC---NGVQITGWLPQVQPDGL------LRWRPSLLSVAQGMQ 979 + + +TGW+ +V + + ++ + + ++ Sbjct: 767 VTAEIPGGDPFTVTGWVDRVMFNEQTKEFAVVDYKTGNVKTWKELE 812 >UniRef50_C5RQN8 Recombination helicase AddA n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQN8_CLOCL Length = 1287 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 41/385 (10%), Positives = 102/385 (26%), Gaps = 88/385 (22%) Query: 385 EVEVLHDRLLAMLEEDPTLT--------------PRDIIVMVADIDSYSPFIQAVFGSAP 430 E +++ + ++ + +DI++++ + + VF Sbjct: 570 EAKIIGAEIKKIMGREAGYRRKKVFDKGSYRDVEYKDIVILLRSTVNRTD----VFLEEL 625 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 + +P + ++ ++LL + D+ +LA+L P+ +++ L Sbjct: 626 KNLEIPVYADSTSGFFDNIEVKTILALLQVIDNPKQDIPLLAVLRSPI----GGFSDDEL 681 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 + + +M+ + L Sbjct: 682 ----------------------------------------IDIKISMDKEYCYFFDKLSN 701 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 G +L + L +LN +R +E + D F+ Sbjct: 702 YCVVGSDNDLREKTKAFLRRLNDYRSKSLHLSLVELIWFLFTDTGYLAFVGTLPNGMQRQ 761 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS--QRFLAGPVNICTLMPMR 668 + + Y +++ + V I T+ + Sbjct: 762 GNLRILFHRAKQYEATSYRGLFNFINFMEKMKNTSSDLGDAKLLGENDNVVRIMTIHKSK 821 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFD-----------------------LMSQKPKRGD 705 + F VV L + + F L + ++ Sbjct: 822 GLEFPVVFLAS-TSKRFNNRELNNEFLFHHNFGIGIKYTDFEKRISYSSILRNLIQEKMK 880 Query: 706 RSRRDDDRYLFLEALISAQQKLYIS 730 ++ + AL A++KL I+ Sbjct: 881 IENYSEEMRVLYVALTRAKEKLIIT 905 >UniRef50_UPI0001788A90 UvrD/REP helicase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A90 Length = 822 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 69/512 (13%), Positives = 154/512 (30%), Gaps = 84/512 (16%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV-GNPLLASWGKLGRDYI 311 D LA L +R R ++ + E ++ V G+ +G G Sbjct: 242 DSGLLASLQSRYRYVMVDEFQDTGLLPYELLKKIVAPHRNLMVVGDDDQTIYGFNGARNE 301 Query: 312 YLLS---DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 ++L ++ + ++ + + + ++I+ + R S L Sbjct: 302 FILEFDQTFPGAKVVTLDINYRSLSSIVGLGNEIIRVNERRRPKQLRSTRKSSSVPLYLR 361 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 P D P +E E+L + + + RD ++ + +A+F Sbjct: 362 PGD----------PDQEAELLLTHITEQV-REHGKQYRDHAILYRT----ANNSRAIFEQ 406 Query: 429 APADRYLPY-AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 R +P+ + +++ + L L R + +L + + Sbjct: 407 -LVMREIPFIHYENGDLFYEQWIVKPLMDHLRLSLDRRNFTAMEGMLHTLYINRDKGM-- 463 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 ++ + L P R Sbjct: 464 -------AFIRQQDAPRPKKGPLSHLLSFPGLKDFQIENIRER----------------- 499 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + +GL PL+ + R + F +A+ Sbjct: 500 ------------------------SKLIKGLKAMEPLQAVQEMRRQFYDKFL--EADERQ 533 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL----DQERISQRFLAGPVNICT 663 +TL ++ Q + E A ++ + + + + + + A V + T Sbjct: 534 EITLHKEFIQEGLDEL-EASAKRFGDIAEFVGFVDRLIIIHKEMAAMKRDEHADAVRLMT 592 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR----RDDDRYLFLEA 719 + + + F VCL+G ++G+ P A Q+P + +++R L A Sbjct: 593 IHKSKGLEFPSVCLIGASEGILPHTSALDAERRDDQRPLSDKEDKALDALEEERRLAYVA 652 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 + A+ +L IS G + S +++ Sbjct: 653 ITRARDELVISSPG--FYRGRKAEVSRFFRDV 682 >UniRef50_Q0TV46 ATP-dependent helicase/nuclease subunit A n=12 Tax=Clostridium RepID=ADDA_CLOP1 Length = 1271 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 47/396 (11%), Positives = 110/396 (27%), Gaps = 89/396 (22%) Query: 381 SPQREVEVLHDRLLAMLEEDPT---------------LTPRDIIVMVADIDSYSPFIQAV 425 S Q E ++ ++ ++ + + +DI++++ +++ Sbjct: 565 SIQLEARIIGKKIKELMNPEDGSHYMVFDKDLGKYRRIKYKDIVILLRATKNWA----ET 620 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 F +P + ++LL + D+ +L+ L P+ F Sbjct: 621 FVDELGTYGIPVYADTGTGYFQTIEIRTILALLHIIDNPMQDIYILSALRSPI----FSF 676 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 T E LR + Y E + Sbjct: 677 TSEEFADLRLLNKD----------------------------------KYFFEIIKEVVD 702 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR--DMLNAFFLPDA 603 + + EL G L LN WR A P++E++ + Sbjct: 703 GIY----DESISKELKGKCKYFLDYLNKWREK-AAYMPIDEFIWFLYSDTSYYGYVGTMP 757 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPVNI 661 + +Q + + ++L + ++ V I Sbjct: 758 NGVQRQANLRILFQR-AKQYESTSFKGLFNFINFINKLKKSSGDMGSAKILGENENVVRI 816 Query: 662 CTLMPMRSIPFKVVCLLG---------MNDGVYPRQLAPLGFDLMSQKPK---------- 702 ++ + + F VV L G + + + + +G + + K + Sbjct: 817 MSIHKSKGLEFPVVILGGTGKQFNKMDLREDILLHETLGIGTNCIDVKKRIKYDTLQKHA 876 Query: 703 ---RGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 + + ++ + A A++KL I+ Sbjct: 877 IKKKCELEVLSEEMRILYVAFTRAKEKLIITGAVSD 912 >UniRef50_A7VW13 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VW13_9CLOT Length = 1078 Score = 146 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 79/649 (12%), Positives = 163/649 (25%), Gaps = 137/649 (21%) Query: 167 PLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA-------- 218 L + L H + ++ L + S Sbjct: 524 ELRQRLKYALPAKAANAVHIGTFHSLCLKLLTGLRGKVTLAGEAEALDIASQVLRPLGLK 583 Query: 219 LPPVYLQALQALGKH----IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDREL 274 L P + LQ + K E L C+ Y + + L +R+ Sbjct: 584 LSPR--RLLQEVSKWKNGFSEEALEHPGACQEYCRRLSERKLLDFDDLLLEVLREYERDP 641 Query: 275 PLFRDSENAGQLFNSDGEQDVGN-PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDN 333 F L + + + LL W K L + Q + F P Sbjct: 642 DAFPSKPFRQILVDEFQDCNAVQFKLLRYWSKK---NGRLFVIGDPDQSVYGFRGSDPAC 698 Query: 334 LLHNIQSDILELENRAVAGVNIEEFS--------------RSDNKRPLDPLDSSITFHVC 379 +Q + EL+ + P ++ F C Sbjct: 699 F-KRLQEEYPELQAVRLKTNYRSSPEILSCALPVISHNPGGKRELEAFRPPQGAVRFLPC 757 Query: 380 HSPQREVEVLHDRLLAML--------------EEDPTLTPRDIIVMVADIDSYSPFIQAV 425 + + + + AM+ + + + +I ++ + Sbjct: 758 ENGLSQGIAIAKEINAMVGGIDMLDAQSCVSSQRETSRDFSEIAILYRTHHE-----AEL 812 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 +PY ++ R H + + L F Sbjct: 813 LEKCLQRESIPYVVAGREDFLRHDKVRGLTCFFQFLSEPDDLTALAVCLK-----LLFSC 867 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 E+ L+++++ GY++ + Sbjct: 868 PEDLSESLQRFLSSY--------------------------------QGYSLPKKLELLE 895 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 + + L + LL ++ + L L+ P + Sbjct: 896 NEYRNVGVLTVSLPLFRSIYPLLE-----------KKKPAKLLETAALELSLEQEPAVQK 944 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLM 665 + ++A+ + Q D L + + R S V + TL Sbjct: 945 LLNTASFYSKTSELLAQLILGQESD----------LTRSCKKNRFSS-----AVTLTTLH 989 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + F VV L G+N G P +G +++R LF + A+ Sbjct: 990 GSKGLEFPVVFLCGVNQGNLP-------------LEAQGRMQSIEEERRLFYVGMTRAKD 1036 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 +L + PS + E+ + + P +A + + + Sbjct: 1037 ELILLSSDH---------PSPFLGEIPQELLKREARPAGKAPHPAQQLS 1076 >UniRef50_C6CTT6 Recombination helicase AddA n=2 Tax=Firmicutes RepID=C6CTT6_PAESJ Length = 1277 Score = 146 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 63/566 (11%), Positives = 150/566 (26%), Gaps = 97/566 (17%) Query: 316 DLESSQELDAFVDVTPDNLLHN--IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS 373 D + EL +L ++ +++ + + SD++ ++ Sbjct: 508 DYDKRAELVCGASYPEPDLPGRFAVELAVIDKAGSSNEEDGAVSPADSDDESEQGAGPAA 567 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFI 422 + + Q E ++ ++ ++L+E + RDI++++ +++P I Sbjct: 568 ESAEELQTAQLEARLIARQIRSLLDEGFRVYDGKKRESRPMEWRDIVILLRATQAWAPVI 627 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 +P +E +SLL + D+ + + L P+ Sbjct: 628 I----EELQGAGIPAYAELSSGYFDATEVETILSLLRVIDNPYQDIPLAGTLRSPI---- 679 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 F + E L +R + Sbjct: 680 FGLNAEELALIRIGAMQ-----------------------------------------DT 698 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 + +VL L EL L+ L +L+ WR Q + + R+ F Sbjct: 699 YYDAVLQAAGDLLLPDELRRKLSLFLERLDRWRNDARQGSLADLIWSIYRETGYYDFAGG 758 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ--RFLAGPVN 660 + + + + + ++ V Sbjct: 759 LPGGVQRQANLRALHDRARQYEATSFRGLFRFLRFVERMRDSGGDLGTARALGEQENVVR 818 Query: 661 ICTLMPMRSIPFKVVCLLGM----NDGVY------------------PRQLAPLGFDLMS 698 I ++ + + F VV + G+ N P + Sbjct: 819 IMSIHKSKGLEFPVVFVAGLGKNFNQQDLRSAFLKHKQLGFGPKYIDPEKRVSYPTLPFL 878 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV-----LVQELID 753 +R ++ + AL ++K+++ R+ S + + Sbjct: 879 SIRRRMRMEMLAEEMRILYVALTRPKEKMFLVGTVSDAAAKQRRWQSASDAKGYISDFR- 937 Query: 754 YIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQA 813 + + + ++ H D + Q A A+ Sbjct: 938 -LSSASTFLDWLGPLAAAAFNQLPDETVPGHE----DSRLLQWRAGVVDAAMLGLEAAIG 992 Query: 814 GKAHSEFVQPLPFTLPETVPLETLQR 839 + +E Q + + L L + Sbjct: 993 VEERTEEDQAREDRMQGVLSLAQLDQ 1018 >UniRef50_C0GDI3 Recombination helicase AddA n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDI3_9FIRM Length = 1229 Score = 146 bits (367), Expect = 7e-33, Method: Composition-based stats. Identities = 80/702 (11%), Positives = 176/702 (25%), Gaps = 162/702 (23%) Query: 383 QREVEVLHDRLLAMLEEDPTLTP--------------RDIIVMVADIDSYSPFIQAVFGS 428 +RE V+ ++L +L RDI++++ + + + + Sbjct: 553 EREATVIAGQILVLLNGPDGARYVFDKEEKAYRPVTYRDIVILLRATSNSANRLVEI--- 609 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A +P + +E +SLL + D+ + A+L P++ +T E Sbjct: 610 -LARHGIPAYADLSSGYFAATEVETMLSLLQVVDNPRQDIPLAAVLRSPLV----GLTVE 664 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L +RQ A E + +VL Sbjct: 665 DLAAVRQ----------------------------------------AGERNDDFFDAVL 684 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD-MLNAFFLPDAETEA 607 + L L L L WR +E V R+ + + + Sbjct: 685 AASQQ--QFPGLSEKLTDFLTTLERWRTLARRETLATFITAVYRESGYSDYVAGLPDGAQ 742 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ--RFLAGPVNICTLM 665 + + + ++L + + ++ V I ++ Sbjct: 743 RQANLRALFSR-ARQFDRFARQGLFRFLSFIEQLRRSGEDLGTARALGEKENVVRIMSIH 801 Query: 666 PMRSIPFKVVCLLGMNDG----------------------VYPRQLAPLGFDLMSQKPKR 703 + + F VV L + V P + Sbjct: 802 KSKGLEFPVVILGDLGKTFNFQDQRSEMLVHRRLGLGPLIVEPEKKLRYPSLPYLALKIM 861 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYI------------SYIGRSIQDNSERFPSV----- 746 G+ R ++ + AL A+++L + S+ + S Sbjct: 862 GEAETRAEEMRVLYVALTRAREQLILVGSARGLDKHLESWRQLLAHCGEQLPASELTRAR 921 Query: 747 -LVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT--------RMPFDPQNYQPG 797 + L + + + G ++ + LT + + + + Sbjct: 922 TYLDWLGRALIRHGDVEGRTETYTWQAGEESRFRLTVWDRESLSEIAVKREGEEEYTKRD 981 Query: 798 ERQSYAREWLPAASQAGKAHSEFV----QPLPFTLPETVPLETLQRFWA----------- 842 S R + A + + LP + + L+R ++ Sbjct: 982 AILSLRRVKVDTADDLREEIRTRLAYKYPYARLDLPAKLSVSELKRRFSELEEEEGEKKA 1041 Query: 843 -HPVRA----FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL 897 P F Q + ++ L + L+ +++ E Sbjct: 1042 FTPTSWSRPAFIQQKAGLSPAER------------GILYHQVLQHLDLSLSLDERGIEGQ 1089 Query: 898 FRRFRAAGDLPYGAFGE----IFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGV--- 950 + AG L A + E ++ + + + L + Sbjct: 1090 IHYLQKAGVLAEEATDYLDPGLIAAFFTSEAGRVVQKYRSEVYREWPFTLSLPAAEIATG 1149 Query: 951 ------QITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV 986 I G + + + L L Sbjct: 1150 NGDESLIIQGIIDLLVRTPQGFV-VIDYKTDRLPGGGLNELA 1190 >UniRef50_UPI0001C4301D ATP-dependent nuclease subunit A n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4301D Length = 1135 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 89/754 (11%), Positives = 202/754 (26%), Gaps = 161/754 (21%) Query: 325 AFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR 384 F D++ + Q+ L A ++ + Sbjct: 452 LFQSAMTDHITESYQTRYAALSANREAEQPDQKQMELLLLNKEETD-------------E 498 Query: 385 EV---EVLHDRLLAMLEEDPTL----------TPRDIIVMVADIDSYSPFIQAVFGSAPA 431 E E L R+ M+ +D+ V++ A + Sbjct: 499 EAGSYEALAHRINEMITSQQPRVFKGESWQAPAFKDMAVLIPARTDLLKL-----ERAFS 553 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 + +PY + + F++LL + F VL+LL P++ +T Sbjct: 554 KQNIPYTVYGGIGFYERQEIIDFLTLLRWMNRPFEDVYVLSLLRSPLI----GLTMNDFV 609 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV-LPY 550 + + + + D +P TG + +L A++ + V Sbjct: 610 TIAK--QKEATQSFADYLYQLSESMPQTGLADSSDLPAQQILDAALKLKEWLLNYVPFSI 667 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 S G + + L+ L I GL + + +E+ + + ++ + Sbjct: 668 KGSPGETFDRMIKETGLVHSLLIQSNGLQKVKNVEKLIQMI-------------EQSHLR 714 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 +E+ I + R VNI T+ + + Sbjct: 715 SLEEIIHFIDERMALNDKEGEAEME-----------------RTEGDAVNIMTIHASKGL 757 Query: 671 PFKVVCLLGMNDGV----------------------------YPRQLAPLGFDLMSQKPK 702 F +V L + V P++L GF+L+ + Sbjct: 758 EFPIVYLPQLERSVQGDKGSVRFDAKLGIVWSLEEETDNLEARPKKLVTPGFELVKE--- 814 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 ++ + LF A A+ L + D +++ L++E D Sbjct: 815 AAGLESEEESKRLFYVAATRAKDYLVM----IGNGDGAKKSWLHLIEEARDC-------- 862 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQ 822 + + L + + Y Sbjct: 863 -GPLEDYITVVNEISEQLPHHAENHLYKGTELAAKKEVLY-------------------- 901 Query: 823 PLPFTLPETVPLETLQRFWAHPVRAFFQMRLQV----NFRTEDSEIPDTEPFILEGLSRY 878 + + + F P + + L V R++ +T ++ Sbjct: 902 --------PLSVSEIMTFIHQPEEYYEKYVLGVNESRRLRSDADADQETRVQQVDPAVVG 953 Query: 879 QINQQLLNALVEQDDAERLFRRFRAA--GDLPYGAFGEIFWETQCQEMQQLADRVIACRQ 936 + + A+ + + + + M+ ++ Sbjct: 954 TLVHRACELRDYGFGAQEAVTEAMNYVDELNDTASVKVSYEQEVSELMETYSEAQQTELG 1013 Query: 937 PGQSMEIDL--ACNGVQITGWLPQV----QPDGLLRWRPSLLS-------VAQGMQLWLE 983 E G ++ G + +V ++ ++ + + +QL+L Sbjct: 1014 TPVENEWSFATEIAGAEVIGEIDKVVERDGCLHIIDFKTNRIKRSGSEWLAVYDVQLYLY 1073 Query: 984 HLVYCASGGNGESR--LFLRKDGEWRFPPLAAEQ 1015 + Y G+ S L++ +D E + E+ Sbjct: 1074 KMAYEQETGHTISTMSLYVLRDKEKPLHTIHVEE 1107 >UniRef50_B5YD55 ATP-dependent DNA helicase n=2 Tax=Dictyoglomus RepID=B5YD55_DICT6 Length = 656 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 57/515 (11%), Positives = 140/515 (27%), Gaps = 96/515 (18%) Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGK 305 ++W + + + + R E + N + G Sbjct: 216 FFWYRLLLESEKTRKILNDRFLYILVDEYQDTNWLQGEIIR-----LTREENKNILVVGD 270 Query: 306 LGRDYIYLLSDLESSQELDAFVDVTPDNLLHNI------QSDILELENRAVAGVNIEEFS 359 + + + + +F ++ P + + +I+ L N + + F Sbjct: 271 DAQSIYSF--RGATIENILSFPEIFPGTRIFYLVFNYRSTPEIINLANEIIKRNTRQYFK 328 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 + + E + + + + + + + +DI V+ Sbjct: 329 EIKPVLKSGSKPKLVWVR---DDEEEAQFVVEVIKELHK--EGVKYKDIGVLFRS----- 378 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + + +PY + ++ ISLL + + + Sbjct: 379 NYHSMAVQMELTLQGIPYEVRGGLRFFEQAHIKDMISLLKILFNPQDEISAQRFFKLFP- 437 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 I + L Q + ES I L + Sbjct: 438 ----GIGRAYAKKLSQVLKESKDFDKIFQMQFSGRTLEG------------------LRI 475 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 + W + + + L ++ +D L + Sbjct: 476 LKNIWDKIKVIP------------VQNFSEILRVFFN------------EYYKDYLERNY 511 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 + E + + + + + L E + + V Sbjct: 512 PDFKDREKDVDQLI-LLSERYDDLEK--FLSELTLYTYAGE------KLLEEEEEEKDFV 562 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 + T+ + + + V +L + G +P + +++R LF A Sbjct: 563 VLSTIHQAKGLEWHAVFILRLVQGDFPSYKSMDNI---------------EEERRLFYVA 607 Query: 720 LISAQQKLY-ISYIGRSIQD-NSERFPSVLVQELI 752 + A+++LY I+Y+ R ++D N PS+ ++EL Sbjct: 608 VTRAKRELYVITYLTRKVKDMNVFTKPSIFLEELP 642 >UniRef50_Q027B7 DNA helicase/exodeoxyribonuclease V, subunit A n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027B7_SOLUE Length = 1045 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 90/752 (11%), Positives = 188/752 (25%), Gaps = 112/752 (14%) Query: 257 LAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSD 316 A+L + ++ + + ++ + D VG+ + +G + Sbjct: 325 RARLQRQFDHILMDEFQDTNGQQAKLIELIRPPDRFYAVGDINQSIFGFRHAEPQGFARY 384 Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILE-LENRAVAGVNIEEFSRSDNKRPLDPLDSSIT 375 + D + DN ++IL +E IE+ + +R D + S+ Sbjct: 385 RDEIATGDRHLVQLVDNFRSR--AEILSAVETLTAGAKGIEDRALVAGRRFDDAPEHSVE 442 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 E + + R++ + P +D V+V + + + F A + Sbjct: 443 VIAAPETAIEAQWVARRIMEL--SGPEPQFKDFAVLVRNTE-----VIPEFTDAFDAAGI 495 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY ++ R + + LL + + +L P++ A + LR Sbjct: 496 PYLVNRGRGFYASREVNDLTHLLRAIANPRDEISLAVVLRSPLVNASVE------ALLRL 549 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 +N + + L+ H WR L + Sbjct: 550 KMNGENLGAALQRSEDALLQRFGARLHEWRGRRE------------YVTFDRLLLEAIDD 597 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 G++ L Q ++ + + E V + P ++ Sbjct: 598 CGYPASGNVDKFLAQARDAASRMSLDEFVMELAQVREENPREPDAPPEDSA-------NA 650 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 + + V ++ + + + S+ + G R Sbjct: 651 VKIMTVHSAKGLEFPVVFVAAIHKGVDTGVPAVAFSRHYGLG---------ARWRN---- 697 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 P + + ++ LF A+ A+Q+L +S+ Sbjct: 698 ----------PASGQDKDDLFQHALRREWKQREEEESNRLFYVAMTRAEQRLILSFTAA- 746 Query: 736 IQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ 795 R P + +++ + PGD + P Q Sbjct: 747 -----ARKPQNWDKLVMERLRIEPGTPGDAVKIFEA----------------PDGKQWKA 785 Query: 796 PGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP---LETLQRFWAHPVRAFFQMR 852 A E L + + P + + L F P + + Sbjct: 786 RILIAQAAPELLTRERTPNEEITVQFAVPPVVEEQHDSNATVTALALFAGCPRKYYLNRY 845 Query: 853 LQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAF 912 L R +E L+ LL R P G Sbjct: 846 LGFEGR----AARRSEGAALDAGEFGTQVHALLAGTAVASPDPEAVRLAEVFRQSPLGRR 901 Query: 913 GEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRW----- 967 E + + LA I G + + Sbjct: 902 AENAVRIER------------------EFDFLLAIADQVIVGQVDLWFEENGELLVVDYK 943 Query: 968 --RPSLLSVAQGMQLWLEHLVYCASGGNGESR 997 S + + + L A + Sbjct: 944 TDTVSASEASHRARDYGLQLRLYALAIERMTG 975 >UniRef50_A1U7Y3 UvrD/REP helicase n=2 Tax=Marinobacter RepID=A1U7Y3_MARAV Length = 715 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 52/436 (11%), Positives = 125/436 (28%), Gaps = 67/436 (15%) Query: 351 AGVNIEEFSRSDNKRPLDPLDSSI--TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 AG I+ K+P D V + + + D++ + + DI Sbjct: 315 AGNLIKHNRSRLAKKPFSAKDQGTLPEVRVSERDRDMAQSIVDQISELRAQ--GAEYNDI 372 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 ++ + + A ++PY++ + ++A + + + +++ Sbjct: 373 AILYRTNR-----MTTILEPALKQAHIPYSVVGGMSFYERQEIQAATACIRIA-NKWDDW 426 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 L L P + I ++G+ + + E Sbjct: 427 MALRSLQ-PYID---GIGKKGINDTIKSLQEYN--------------------------- 455 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 LL A+ A ++ L L + + + Q + Sbjct: 456 -ENLLTLAIHEAPQQF---------GKAGIRLQAFLVEVFANTHGNADNMTQPELARRLV 505 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 +D + + + ++ E A+ + L + + Sbjct: 506 QWMKDGPMKILDREKDDVVRVKR-SDNLDLLVDEIDRAKPD------CFMEYLMEGPISD 558 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR----- 703 + V + T+ + + + V + GM+DG+ P A + + P + Sbjct: 559 FVEASDDEDRVTLSTIHRSKGLEWPHVIIAGMSDGLMPLDSAKMNGRPSATSPSKDQADP 618 Query: 704 -GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE---RFPSVLVQELIDYIGQSH 759 D + +++R L A A + L + + E PS + E+ + Q+ Sbjct: 619 DDDGGKPEEERRLAYVAATRAAETLTMHHADLYHFPGGEPVVVDPSPYIAEMGLQLPQAQ 678 Query: 760 YLPGDEALNCDESEAR 775 + Sbjct: 679 LTNREGYQAKKPEFTP 694 >UniRef50_Q9K917 ATP-dependent DNA helicase n=1 Tax=Bacillus halodurans RepID=Q9K917_BACHD Length = 780 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 65/549 (11%), Positives = 151/549 (27%), Gaps = 114/549 (20%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWG---- 304 GDI+ + + R + D ++ + LLA + Sbjct: 298 GDIQPKSTWEENCLYLYEGYERSRISQQWFDFDDMLIGAYET--LTQNHELLARYQERFR 355 Query: 305 -----------KLGRDYIYLLSDLE-------------------SSQELDAFVDVTPDNL 334 K+ + I LL+ E + AF Sbjct: 356 YLFVDEYQDINKVQYELIRLLTQKEKNICVVGDDDQSIYSFRGSDPSYIQAFERDYEHAK 415 Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSIT---FHVCHSPQREVEVLHD 391 ++ + + N+ ++ + + S + + E ++ Sbjct: 416 QIVLKDNYRSSHPIVMCAQNVIHHNKQRIAKSVRAQYDSEKAPLLFYPYDEEEEATMILS 475 Query: 392 RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS-DRRARQSHPV 450 + + +P ++ S ++A+F +P+ + + + Sbjct: 476 DIQEKIAS--GTSPSAFAILYRTNVS----VRAMFER-LVASNVPFRMEQEGESFYQRST 528 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 + ++ L L ++ + + LL P L + ++ L+ L+ Sbjct: 529 VRKVLAYLRLSVNQDDPKAMEELL--PALF----LKKDTLQELKAITIFHDC-------- 574 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 ++L + + L + Sbjct: 575 -------------------------------SLLDALLHLKNVQPFQQKKLKKLLPYFQK 603 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 L L+ + + L F M + +I Sbjct: 604 LPH----LSPTQAISMIEKHM--GLTDFIKKRGNEGNVMDRGSDDLKDLI-----VAANS 652 Query: 631 AVPLSLLRDELAQRLDQERISQRFLA--GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + D ++ + + ++ A V + T+ + + F+ V LL +G P Sbjct: 653 FATIPTFLDHVSHMIAKHHELKKAPAQEEAVQLMTIHRAKGLEFQHVYLLSAVEGSLPH- 711 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 D + GD +++R L A+ AQ++L+IS S++ S V Sbjct: 712 ------DYALDAWREGDDRPLEEERRLMYVAMTRAQEQLFISVP--SMRRGKNAQRSRFV 763 Query: 749 QELIDYIGQ 757 +E++ Q Sbjct: 764 REMLRNHRQ 772 >UniRef50_A5KIK3 Putative uncharacterized protein n=2 Tax=Ruminococcus RepID=A5KIK3_9FIRM Length = 1197 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 81/708 (11%), Positives = 185/708 (26%), Gaps = 135/708 (19%) Query: 378 VCHSPQR-EVEVLHDRLLAMLE----------EDPTLTPRDIIVMVADIDSYSPFIQAVF 426 + +R E ++ R+ +++ E + +DI+++ + ++ F Sbjct: 540 EAENVRRSEARMIARRIKSLMRGGVVSDKKTGEYRPVQYKDIVILTRSVKGWA----EDF 595 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 + A+ +P R + + L + D+ + A+L P+ ++ Sbjct: 596 SAVLAEEGIPAYSVSREGYFETYEVSVLLDYLKILDNGRQDLPLAAVLASPL----GNLL 651 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 E + +R +S Sbjct: 652 TEDMAKIR-----------------------------------------VAYPDVPFHES 670 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 Y L L Q++ +R+ ++ + + + ++ E Sbjct: 671 ARMYASEEAQDPVLKDRLMRFFSQVDHFRKKVSYTPIHDLLTEIIEETGFGIYISAMEGG 730 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPVNICTL 664 + G Y ++L + + A V I ++ Sbjct: 731 VQRAANVEMLVEKAKAFEGTSYKGLFHFVRYIEQLKKYDVDYGEAGIMDEQADTVRIMSI 790 Query: 665 MPMRSIPFKVVCLLGMN----------------------DGVYPRQLAPLGFDLMSQKPK 702 + + F VV GM D + ++ L + Sbjct: 791 HKSKGLEFPVVFAAGMGKQFNTQDTKSSMILHPEWGIGIDKIDLKRRTKAPTFLKKLIRE 850 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIG------RSIQDN--SERFPSVLVQELIDY 754 ++ + AL A++KL ++ + RS +D + S +I Sbjct: 851 EAMYEMWAEEMRILYVALTRAKEKLIMTGVLPDRFIMRSGKDGVITAGAKSYF-DWIIPA 909 Query: 755 IGQSHYLPGDEALN---CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 + E + + A + + + + Y E Sbjct: 910 LWSEEEEAALEDAPVCIFQYTGNDIGADILQVKSEQLALDVLKHWDVTKVYDPEIRKCLD 969 Query: 812 QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF- 870 + + + + L++ R Q E +P F Sbjct: 970 EQADYVYPYYS--EGGMKMKFTVSELKK------RKALQEEAGEEMYKEPQTVPLLPRFI 1021 Query: 871 ----ILEGLSRYQINQQLLN-----ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC 921 L G SR + L E DD E R G L I E Sbjct: 1022 KEEETLSGASRGSAYHKFLELLDFAKEYEADDLEAEVERLAEDGRLSREMAECIETEDMM 1081 Query: 922 QEMQ-----QLADRVIAC-RQPGQSMEI----------DLACNGVQITGWLPQVQPDGL- 964 + ++ ++ Q I DL+ + + G + + Sbjct: 1082 RFLRTKSGVRMLQAARNRKLYKEQPFVISVNASEIYQGDLSGEKILVQGIIDVYFEEEDG 1141 Query: 965 ---LRWRPSLLSVAQ-GMQLWLEHLVYCASGGNGESRLFLRKDGEWRF 1008 L ++ + + ++ + L Y A + + +++ + F Sbjct: 1142 LVVLDYKTDQVKSRKELVEKYHAQLEYYAHALSQLTGKTVKEKIIYSF 1189 >UniRef50_B0RA37 Nuclease subunit B homolog n=1 Tax=Halobacterium salinarum R1 RepID=B0RA37_HALS3 Length = 1018 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 91/627 (14%), Positives = 172/627 (27%), Gaps = 104/627 (16%) Query: 344 ELENRAVAGVNIEEFSRSDNKRPLD--PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 ELE +G + S + D P+ + + +P+RE+ + L L Sbjct: 215 ELEPANESGRAFGTITESLYRPDPDTAPVPDGLRWRELPTPEREIRFVARELRTELAN-- 272 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 P D+ V+ ++YS +++ F + +P+ + LL+L Sbjct: 273 GRDPDDLAVVAPGTEAYSGYVEDTFDTFD----IPHVTTAASQLNQTFAGSVVHDLLNLA 328 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 + +ED+ +LL P++ + Sbjct: 329 EPDPRAEDLTSLLANPLVD----------------------------------IVDTDQA 354 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 + R V + LL L R Sbjct: 355 NAVTAAARRRDTVSVSPLLDDVDDEVASL-------------VEELLATLEPLRTD---- 397 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL---- 637 +E+ R +++ F +A TE + EQ + + + L+ + Sbjct: 398 -DIEDATETLRRLMDDRFDLEAATEDYASGAEQAVEQRAYDLVDEVLSSFESLAAVNSDL 456 Query: 638 --RDELAQRLD--QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 + D R+ QR G V + L+ R F+ V L+G+ +P Sbjct: 457 SPLALFTRAFDGVAIRVPQRAAGGHVEVMGLLDARMRSFEKVFLVGLTSEHFPVTPERPA 516 Query: 694 FDLMSQKPKRGDRSRRDDDR---YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 F + R D+R L++ +L I+ D S S ++ E Sbjct: 517 F--FEEMTDADPRFDTGDERLRGRYLFATLLANVDELTITTPETGD-DESAVVRSPVLDE 573 Query: 751 LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR--MPFDPQNYQPGERQSYAREW-- 806 L G D+ + E R A D + P + + R Sbjct: 574 LQRVTGIEPEDGVDDRVGSREDLQRRVAATADRRAAVSHAGDRGDLSPEQTKRTDRGLHC 633 Query: 807 --------LPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFR 858 L + + + P + E ++R+ + + L + Sbjct: 634 ADNRGTAGLSEHDGVLEPET-VDEVYPPSEREPYSASRIERYVECGFKFYADEVLGI--- 689 Query: 859 TEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWE 918 E PD + L +L D + + E Sbjct: 690 ----EDPDDIEVVPTPLETGSYVHDVLERFFA--DLQDETEDGVDLTEFDRHDLATHLRE 743 Query: 919 TQCQEMQQ--------LADRVIACRQP 937 +E+Q +R A Sbjct: 744 IAVEELQDTDFEYDGLFYERWKAELFA 770 >UniRef50_B5Y6N2 ATP-dependent DNA helicase PcrA n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y6N2_COPPD Length = 696 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 42/366 (11%), Positives = 101/366 (27%), Gaps = 74/366 (20%) Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 + +I V++ + A A R + Y I + ++ ++ L L Sbjct: 388 GIPYEEIAVLMRTRA-----LTARVEREFATRNIQYHIIGGVPFFARREIKDILAYLRLS 442 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 + + +L + L L + E+ Sbjct: 443 RNAMDRVSLKRIL----TMKKRGFGTASLEKLFNFAEEN--------------------- 477 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 ++ L AM+ +V + + + L +L+ + Sbjct: 478 --------KLTLLEAMK------AAVESLLFKKLSMNDYLESLYTLIQTIQEIAEPSQAI 523 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + E D + + E ++Q + ++ + Sbjct: 524 YLVME-QENLLDHFRSISKSEEEYIERTENVKQLI---------SIAEESADMDDFLQRS 573 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 A + V I T+ ++ + F+ V L + DG +P L+ Sbjct: 574 ALGTRENNGGVE----GVAISTVHGVKGLEFQAVILYYVTDGFFPHSLSVT--------- 620 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN---SERFPSVLVQELIDYIGQS 758 + ++++R L A+ A++ L + N PS ++ + + Sbjct: 621 ----TAEKEEERRLLYVAMTRAKEHLIFYVPYKQPWGNGFEQMARPSPFLRSIPKELWDG 676 Query: 759 HYLPGD 764 + Sbjct: 677 KPNEIE 682 >UniRef50_Q67MD5 ATP-dependent helicase/nuclease subunit A n=1 Tax=Symbiobacterium thermophilum RepID=ADDA_SYMTH Length = 1371 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 76/592 (12%), Positives = 146/592 (24%), Gaps = 84/592 (14%) Query: 383 QREVEVLHDRLLAM----------------LEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 +RE ++ R+ AM L+ L RDI +++ I V Sbjct: 596 EREARLIAARIRAMVDGTADQPPVQVWDRKLKTYRPLQYRDIAILLRATTGRINTIIEVL 655 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 +P ++ F+SLL + D+ + A+L P++ ++ Sbjct: 656 SQ----SGIPAYGQVSTGYFQATEVQVFLSLLQVLDNPLQDIPLAAVLHSPIV----GLS 707 Query: 487 EEGLRYLR------QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 L +R + + A A + Sbjct: 708 AADLARIRLANPRGSFYDALVAAAAPASGAAMAEAAAAPASEAAMAEAAPAPASGAAMAE 767 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAF 598 ++ L G L L L+ WR LA+ RPL + + + Sbjct: 768 AAAAADPAEAGATTSTAPGLEGVLVRFLECLDRWRT-LARRRPLSQVVWQILQETGYLHY 826 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ--ERISQRFLA 656 + E + L + Sbjct: 827 VGGMPGGAQRQANLL-ALYERAREFDQFARQGLFRFLRFIERLQAEQSDMGTAPALGEGE 885 Query: 657 GPVNICTLMPMRSIPFKVVCLLGM----NDGVY------------------PRQLAPLGF 694 V I ++ + + F VV + G+ +D P Sbjct: 886 DVVRIMSIHKSKGLEFPVVFVAGLGSSFSDRDLRGDLLLNRDLGFGPQVVDPGTRLKYPT 945 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD------------NSER 742 + + ++ + AL A+++L + +S++ Sbjct: 946 LAYHAVREVTRLANLAEELRVLYVALTRARERLVLVGSVKSLRAACARWSRGAGAPGWPL 1005 Query: 743 FPSVLVQE--LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 S+L+ +D+IG + D A + + A + + DP ++ Sbjct: 1006 PESLLLSARSYLDWIGPAVLRHADGAPLRELAGEGGTAPGSGPDPALAGDPSRWEVTIWD 1065 Query: 801 SYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTE 860 + +A V E + P+ RL+ F Sbjct: 1066 PAS--LQQILQPRPEAAPPAVDWARIGAAEPLDR---------PLDEALHARLRARFGWR 1114 Query: 861 DSEIPDTEPFI-LEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGA 911 P F L A E+ A P Sbjct: 1115 YPFEPVVRRFGKLSVTELKGYFDPDAEAPAEEMAPPAEEMAPPAEEMAPPAE 1166 >UniRef50_Q897M0 ATP-dependent nuclease subunit A n=1 Tax=Clostridium tetani RepID=Q897M0_CLOTE Length = 1147 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 45/398 (11%), Positives = 113/398 (28%), Gaps = 83/398 (20%) Query: 380 HSPQREVEVLHDRLLAMLEEDPT---------------LTPRDIIVMVADIDSYSPFIQA 424 + Q E ++ + +++++ + + RDI++++ + + Sbjct: 452 DNIQLEARMVGKVINNLIKDEESNSFMIQDKSTKEYRKVQYRDIVILMRATSAMAN---- 507 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 VF + +P ++ +S+L + D+ +L++L P+ F Sbjct: 508 VFTEELNNVGIPVFADTSSGYFETIEIKTIMSILQIVDNPRQDIPMLSVLRCPI----FS 563 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 + E + +R + I L Sbjct: 564 FSPEDIIDIRLINRDISIY---------------------------ECLEKIKNKEPCLE 596 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPD 602 + + DE + EL + S L +LN+WR + +++++ + Sbjct: 597 EEKVYIDEINE---ELKERIISFLEKLNLWRDN-SIHMSIDQFIWYLYTETGYYGYVGAM 652 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPVN 660 + + Y ++L ++ V Sbjct: 653 PGGVQRQANLR-LLFERAKQYENTSYKGFFNFISFINKLRNTSGDMGSAKILGENENVVK 711 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP------------------- 701 I ++ + + F VV + G G + Q Q Sbjct: 712 IMSIHKSKGLEFPVVIMAGTGRG-FNLQDIRKDILFHHQLGFGPEYVDLDKKIKYPTIMK 770 Query: 702 ----KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 ++ ++ + A A++KL I+ ++ Sbjct: 771 KIIAQKIKLETFSEEMRILYVAFTRAKEKLIITGSVKN 808 >UniRef50_Q6FLH1 Strain CBS138 chromosome L complete sequence n=1 Tax=Candida glabrata RepID=Q6FLH1_CANGA Length = 1088 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 121/398 (30%), Gaps = 42/398 (10%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E + +L + + ++V + + + +PY I RA Sbjct: 381 EAPSIAREILYLKSLPNLFSYDSFAILVRKRRQIR-----MIEKSLIEYRIPYQILRGRA 435 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 + A +++ + S E +++ L P + LR+ + + Sbjct: 436 FWELKEIMAMLNIFRIMVSENDEEAIISSLSYP----SRGFGDTSAERLREIFAKYTDKT 491 Query: 505 GIDDDNV----RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 ++ N+ R GL +++ E+ Q ++ + + L Sbjct: 492 KLEILNLIAIGRVYVDIPKSARGVVSGLCKLVEECNKENGQELSVRLVKVFDLIYEKSGL 551 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA--MTLIEQQWQA 618 + + LE +L ++F+ E + + + Sbjct: 552 KHEFL-FKDGKKKGEIDIDGDPNLENPRHKNIQLLRSYFVDTEENQDDSMINQENTALSS 610 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP-----VNICTLMPMRSIPFK 673 I A + + L+ ++ ++ V +CT+ + + + Sbjct: 611 I-NTTKSHGISLADYILQFLNSLSLFAGEKTVATTDDGNKGTLGTVTVCTIHGSKGLEWP 669 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD-----------------RSRRDDDRYLF 716 VV + G D P + D S + GD D++R +F Sbjct: 670 VVFIPGCEDNNIPAIFSDDK-DNTSDNEEEGDGDNKEELTNKKSQNNNVEESIDEERRMF 728 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLV-QELID 753 A A+ LY+S + R PS + QEL+ Sbjct: 729 FVAQTRAKYLLYLS-SVTDMDAAVPRVPSRFLTQELLK 765 >UniRef50_A2RH77 ATP-dependent helicase/nuclease subunit A n=4 Tax=Lactococcus lactis RepID=ADDA_LACLM Length = 1203 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 54/434 (12%), Positives = 116/434 (26%), Gaps = 99/434 (22%) Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 +Q +I + A E +N + DS + E++ + ++ Sbjct: 503 VQGNISDYPVEAEKDFYPELLLYKENTSEEEIEDSEVKI-----SDGEIKGAAQEIKKLI 557 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS-DRRARQSHPVLEAFIS 456 + + P+DI ++V + +P + R + + Sbjct: 558 --EYGVEPKDIAILVRSKSN-----NNKIEDILLSYDIPVVLDEGRVDFLKSMEVLIMLD 610 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 +L D+ ++A+L P+ F E+ L + Sbjct: 611 VLRAIDNPLYDLSLVAMLRSPL----FGFNEDELTRI----------------------- 643 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG-----HLASLLMQL 571 W +L + G EL+ L + + Sbjct: 644 -----------------SVQGSRDLRFWDKILLSLKKEGKNPELINLSLEQKLKAFNQKF 686 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAF-FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 WR+ L + P+ L F ++ + Q + Y Sbjct: 687 TEWRK-LVNKIPIHRLLWKIYTETYYFDYVGALKNGEMRQANLQALSVRAESYESSGYKG 745 Query: 631 AVPLSLLRD-ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM----NDGVY 685 L + + Q D ++ + V + T + + F V L+ + ND Sbjct: 746 LFKFVRLINKFMEQNNDLASVNIKLPQNAVRVMTFHKSKGLEFDYVFLMNLQSRFNDRDL 805 Query: 686 -----------------------PRQLAPLGFDLMSQKPKRGD-------RSRRDDDRYL 715 P + + L+ + R+ ++ + Sbjct: 806 KEDVILSREHGLGMKYIADLKAEPDVITDFPYALVKMETFPYMVNKDLKQRAALSEEMRV 865 Query: 716 FLEALISAQQKLYI 729 A A++KLY+ Sbjct: 866 LYVAFTRAKKKLYL 879 >UniRef50_B6R280 Double-strand break repair protein AddB n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R280_9RHOB Length = 1040 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 108/865 (12%), Positives = 224/865 (25%), Gaps = 144/865 (16%) Query: 147 AQWETGHLVEGLGEAQAWQAPL-WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPP 205 A W + A+ W+ L + +V + +R + + Sbjct: 163 ASWAELGSLVPEDHAEYWKITLEFLKIVTDLWPEHLKAIGMMDPKERRSALIRAEAARLR 222 Query: 206 GLPSR--VFICGISALPPVYLQALQALGKHIEIHLLFTNPCR----YYWGDIKDPAYLAK 259 P R V + G + P + ++A+ L+ R W + P+ + Sbjct: 223 TTPPRGPVIVAGATGSFPATAELMKAVLSLENGALVLPALDRGMDAESWEALGSPSEPQR 282 Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLES 319 + G LL L Sbjct: 283 VP------------------------------------------GHPQYSLRQLLLALGV 300 Query: 320 SQELDAFVDVTPDNLLHNIQSDILELE-NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHV 378 +E D P++ ++ +I+ A + F S+ + + Sbjct: 301 KRE-DVTQLGAPESEALRLRCEIVNEALRPAETTEEWQNFFTSELAEHRETAFAGTQLIT 359 Query: 379 CHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 + E + L +E T ++ D + V S + Sbjct: 360 ARNEAEEALSIALLLREAVEAGKTT-----ALISPD----RTLARRV-ASELTRWGIIVD 409 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 + R + P + I L ++LALL P+ A + + +R + + Sbjct: 410 DTAGRPLEQTPPMVLAILTAKLALQGLDPVNLLALLKHPL--AFLGMKAKEVRSAARALE 467 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 +R P G R + ++ + + +E I Sbjct: 468 RGVLRG----------PHPRPGLSGLREAVEAAHDQAMEKADRPVARWRKLVEEDWDAIN 517 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM---TLIEQQ 615 L+ L L L + E P+E+ + D + + + + + Sbjct: 518 TLLDRLEQALGPLEALLQN-PNEIPVEDIIKTHVDAVLLLGADENGSTEELFSGENGKAL 576 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PVNICTLMPMRSIPFKV 674 + + + G VP + + + R A +++ M R + + Sbjct: 577 AETLTSLLEADAAGLCVPANEWPGVFGALITGGAVRSRTPADPRIHLLGPMEARLQRYDL 636 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY------ 728 V L G+N+G +P++ + K + G +R + SA L+ Sbjct: 637 VVLGGLNEGTWPQRTRNDPWLNRPMKGQIGLDPP---ERKIG----TSAHDFLWNLGAPE 689 Query: 729 ISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP 788 + D S S +Q ++ GQS A V Sbjct: 690 VVLSRSERVDGSPTVASRWLQRIVTLAGQSVEQQMRAKGKRYTEMAHVLDRSET------ 743 Query: 789 FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAF 848 A +P P + + ++ P + Sbjct: 744 -----------------------PVRPAKRPEPKPPVEARPVQLSVTAIENLIRDPYLIY 780 Query: 849 FQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD---AERLFRRFRAAG 905 + L+++ P + I L +E D E+ R G Sbjct: 781 ARHVLKLDEVDPIGGEP-------GAADKGNIIHDALANFLEDWDGPFDEKAVRALLTEG 833 Query: 906 ------DLPYGAFGEIFWETQCQEMQQLADR--------VIACRQPGQSMEIDLACNGVQ 951 + A ++W + ++ + +E+ Sbjct: 834 GRLFRPLDAFPAIRALWWPRFERIAEEFVAYEGEVAPKIYDRFLEEYGKVEMPRPERNFT 893 Query: 952 ITGWLPQVQPDGLLRWRPSLLSVAQ 976 +TG ++ R Q Sbjct: 894 LTGRADRIDQMKDNTLRVVDYKTGQ 918 >UniRef50_C7NJY7 DNA/RNA helicase, superfamily I n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NJY7_KYTSD Length = 1119 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 109/877 (12%), Positives = 209/877 (23%), Gaps = 158/877 (18%) Query: 270 EDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV 329 +D + VG+P + +G G S++ +++FV+ Sbjct: 274 QDTTEAQLSVVRGVFAGDPTLSVTAVGDPHQSIYGFRG----------ASARTMESFVES 323 Query: 330 TPDNLLH-----NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS--ITFHVCHSP 382 H +L + NR + RP D +T +P Sbjct: 324 FDATERHLSTSWRNSGRVLRVANRVAEPLRERSALDLPALRPRPGTDEGPPVTASRFGTP 383 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 E L V+ + V A LPY + Sbjct: 384 ADEARAGAAWLAEHWAPGELGA----AVLCRKRSQF-----PVVTEALEAAGLPYEVVGL 434 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 P + +LL + D + ++ LL P + L L W E Sbjct: 435 GGLLLVPEVADVRALLGVVDDPTRGDHLMRLLTGPAAR----LGAADLVGLHAWRRELER 490 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 RWG VR + + L LL + + W S A L Sbjct: 491 RWG-----VRSPGDEGSAERRDHQQLAVTLLDAVLTPVEAGWTGPQGEAVSDLARARLAS 545 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 ++ L RG+ + + E L + A + + +A Sbjct: 546 LAEAVTQCLGAQHRGVGELALVAEQALGVDVELASRTDVPPWRARAH---LEAFHEHVAT 602 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQ----ERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 A + LS L L+ E + V + T+ + + + V + Sbjct: 603 FAEAGTREP-SLSALMGWLSAAEQHEGALEPGAVEVDPSAVQVLTVHASKGLEWDAVWVP 661 Query: 679 GMNDGVYPR-------------------------------------------------QL 689 G+ G +P Sbjct: 662 GLVAGTFPSGTGTVRPEGPEWVARPATDSAWWAPASGMLPFALRGDAPSLPEWSLPADPD 721 Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 M + ++R L A+ A++ L++S + S + Sbjct: 722 KADFETAMKDFARANGERGLQEERRLAYVAVTRARRLLHLSSAVWGTSA-APTPTSDFLL 780 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 E++D ++ E+ D +++ + L Sbjct: 781 EVLDDCAPGTWVEMPPTDPVPENPVTATPRTALWPRPEAEDLEHHAHAAAAAEVGLALET 840 Query: 810 ASQAGK------------------------AHSEFVQPLPFTLPETVPLETLQRFWAHPV 845 A + A + V +L P Sbjct: 841 APGSEPGWTGLAEDSREHLLRFRQDVRLLLAERDAADQPDIEPLRHVSTSSLVALARDP- 899 Query: 846 RAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN----ALVEQDDAERLFRRF 901 + L T + + +L + Q + + R Sbjct: 900 --GARRFLARPVPTPPARAARQGTDFHAWVESQWAPARLFDVPDLPQESQGEWDAHEERD 957 Query: 902 RAAGDLPYGAFGE---------IFWETQCQEMQQLADR-----VIACRQPGQSMEIDLAC 947 GA + ++++ + + + Sbjct: 958 AQEERAAPGAPQDGLALDGPRLRTRAPGEADLRRFQEHFVASEWSGRTPTWVELPLQTNV 1017 Query: 948 NGVQITGWLPQVQP-----------DGLLRWRPSLLSVAQGMQLWLEHL-----VYCASG 991 G+ + G + P ++ W+ S + L + A Sbjct: 1018 AGLTVRGRADAIFPATRAERDAGLEWVVVDWKTSSSPREAEVGAAAVQLACYRQAFAAWR 1077 Query: 992 GNGESRL----FLRKDGEWRFPPLAAEQALHYLSQLI 1024 G + + F DG P L + L L +L+ Sbjct: 1078 GIDPATVGGAFFHAADGVTVRPELPDGERLEQLVRLL 1114 >UniRef50_C0Z545 ATP-dependent nuclease subunit A n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z545_BREBN Length = 1275 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 79/666 (11%), Positives = 178/666 (26%), Gaps = 119/666 (17%) Query: 129 SKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE--YTHQLGQPRWHR 186 + A+ +QY + ++ + A L A + + + Sbjct: 314 KELAEQIEQYFSTPAEQYVA-----DLQRIAPHMQTLARLVTAFSDAYQLEKRLRGLVDF 368 Query: 187 ANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRY 246 +L + L +PS + + L + + L + ++ +I+L+ + Sbjct: 369 GDLEHLALRVLTETNESGKTVPSSIS----TQLREQFAEVL--VDEYQDINLVQETILQM 422 Query: 247 YWGDIKDPAYLAKLL----TRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS 302 D + + + + + ++D LA+ Sbjct: 423 VSRDGANGQPANRFMVGDVKQSIYRFRLAEPKLFLEKYVTYQKDGDADEACIGRRIDLAA 482 Query: 303 WGKLGRDYIY----LLSDLESSQELDAFVDV---------TPDNLLHNIQSDILELENRA 349 + R+ + L + S + D P+ + +Q+++ ++ Sbjct: 483 NFRSRREVVDAVNFLFRQIMSHGVGEIGYDPSAELINRASYPEAQPNRLQAEMHLIDRNT 542 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT------- 402 V + + + Q E ++ R+ +E Sbjct: 543 VIADEGQAVVAEATDEGEAGIPDGESAEEASVAQLEARLIASRIRRWMEPGEGEEPLLVF 602 Query: 403 ---------LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 L RDI++++ + +Q +P + +E Sbjct: 603 DKKAGGMRPLAYRDIVILLRATSGWGQTMQ----EELHAAGIPVYAEQTAGYFAATEVET 658 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 +SLL + D+ + A+L P++ + E+ L +R I + + Sbjct: 659 MLSLLRVIDNPLQDIPLAAVLRSPIV----GLREQQLAQIR-------IHYATGPFH--- 704 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 Q+VL Y E L +L + Sbjct: 705 -------------------------------QAVLQYAEERPPQESWEKRLRQFFGRLGL 733 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 WR + E + R+ ++ E + + Y Sbjct: 734 WRTEARRGALSELLTMLYRETGYLDYVAALENGQQRQANLRALYDRARQYEAGSYRGLFR 793 Query: 634 LSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG-------- 683 D L + + E + V I T+ + + F VV + GM Sbjct: 794 FLRFVDRLQEAGNDMGEARTIGENEDVVRIMTIHKSKGLEFPVVFVAGMGKQFNTMDLKS 853 Query: 684 --------------VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 V P ++ R ++ + AL A++KL + Sbjct: 854 QFLLHKDLGFGPMAVEPSMQLRYPSLAALGIRQKLRRDMLAEEMRVLYVALTRAREKLIL 913 Query: 730 SYIGRS 735 + Sbjct: 914 VGSSKD 919 >UniRef50_C6B123 Double-strand break repair protein AddB n=19 Tax=Rhizobiaceae RepID=C6B123_RHILS Length = 1064 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 121/937 (12%), Positives = 242/937 (25%), Gaps = 149/937 (15%) Query: 77 LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFD 136 L + + ++W+ LP+++ L + L+ A+L D Sbjct: 106 LSNTARLLELARLILAWR--NKLPEIVRHIHSD---SPLVAPASPADAIWLARNLAELID 160 Query: 137 QYLVYRPDWLAQWETGHLVEGLGEAQAWQ---------APLWKALVEYTHQLGQPRWHRA 187 + D W ++ A WQ + W + + P HR Sbjct: 161 S--IETEDL--DWSELSKLDTGDYAAWWQLTAEFLQIASAFWPERLAELGKS-SPARHRN 215 Query: 188 NLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYY 247 + + L + P + I G + P + A+ E Sbjct: 216 AILRAEASRLSATKPAGP-----IIIAGSTGSVPATADLIAAVAHLPE------------ 258 Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG 307 G I P + R + + NP S + G Sbjct: 259 -GVIVLPGLDLSMPERHWQMVAPEPAPG------------------QHANPASRSHPQYG 299 Query: 308 RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 + L D + P+ L + + A A + + L Sbjct: 300 ---LSSLLKRLKLTRADLTLLDRPEADLERRAEILSQALAPAEATSDWGAWKTDLPAGAL 356 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 S ++ + + E + L LE + ++ D + V Sbjct: 357 SSSFSDVSLIEAANEREEATAIAIALRLALERPGQDSESRAALITPD----RNLARRVMA 412 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + + S + P LL +++LL P+ ARF + Sbjct: 413 E-LSRFGILADDSAGTPLSAMPQGTLLQLLLEAALRPGDPVAIISLLKHPL--ARFGLER 469 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L + + +R G + T L L A++ +W+ Sbjct: 470 GALISATEALELLALRGG----------VAEVDISTLEPLLAHQLAEQALDRHAPQWRKA 519 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER-------PLEEWLPVCRDMLNAFFL 600 L E++ +L + L E L EW L A + Sbjct: 520 LS-PEAADAAYDLARRVTQATEPLASALMRERPEDRGRTARFTLSEWAKRTGRSLEAVAV 578 Query: 601 PDAETEAAM--TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG- 657 A + A++ E + D +A + R L+ Sbjct: 579 DPHGNLADLWSNEAGDALAALLGEVIDTDGQMEADGPQWIDIMAALAAGHAVKPRALSHP 638 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 + I + R + L G+N+G +P Q A F K + G +R + Sbjct: 639 RLFIFGTLEARLQSVDTLILGGLNEGTWPGQTANNPFIPRMMKTEIGLEPP---ERRIGQ 695 Query: 718 EA----LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 A + + + L Y Q ++ S +Q L+ Sbjct: 696 LAHDFEMANGTRHLI--YSRALRQGSTPTVASRWLQRLLAL------------------- 734 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP 833 F+ + G R + A +P P++ Sbjct: 735 -----------GGEAFEAELKGRGNRFLQWAALIDRGDAQAPAQRPSPKPPLALQPKSYS 783 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD 893 + R P + + L+++ + P R + ++++ + + Sbjct: 784 FSEVGRLRRDPYAIYARRVLRLDPVEPFNRDP-------GAAERGTLYHKIIDRFIREAH 836 Query: 894 A----------ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP----GQ 939 E + LP ++ + + R Sbjct: 837 IAGTPDAAAAMEAILSELFDMEKLPPH-IDAVWRPRFRAVARAFLEWEAGRRHGILKTLT 895 Query: 940 SME--IDLACNGVQITGWLPQVQPDGLLRWRPSLLSV 974 + ++L +++TG ++ G Sbjct: 896 EVRGGMELEPINIRLTGVADRIDVTGPHSADIIDYKT 932 >UniRef50_C4Z484 DNA helicase II / ATP-dependent DNA helicase PcrA n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z484_EUBE2 Length = 1220 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 49/395 (12%), Positives = 106/395 (26%), Gaps = 72/395 (18%) Query: 378 VCHSPQREVEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVF 426 + + E + L + ++ RDI+++ + ++ F Sbjct: 535 EATTRELEADRLAKLIEGIVSSGVNVYDADENIYRPAEYRDIVILTRSVTGWAD----TF 590 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 A DR +P S ++ +S+L++ D+ + A + T Sbjct: 591 ADALMDRGIPAYTDSSTGYFSVREIQVILSMLTIVDNPVQEISLAAAMMSYF----GGFT 646 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 L +R+ E + L + + Q Sbjct: 647 AAELGMVRKLGREH---------------ADKNTHNNLYEHLKAVAVLGGAGKMQ----- 686 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE-WLPVCRDMLNAFFLPDAET 605 + +L G A L +L +R + E + W + + Sbjct: 687 -------ESDVKQLSGKCALFLAKLTEYRDKSSVESLYDLCWEMIYDSGYYDYVGTMPAG 739 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP--VNICT 663 + A + Y + L + + L V I + Sbjct: 740 AQRQANL-NVLLERAAGYGKSSYSGLFNFLRYIERLKKFDEDFAEGAASLDNENLVRIMS 798 Query: 664 LMPMRSIPFKVVCLLGMN------DGVYP----------------RQLAPLGFDLMSQKP 701 + + + F +V L G + D P + + Sbjct: 799 IHKSKGLEFPIVILAGAHKSINFMDATAPVLVDQNLGIAVDYVDLERRTKTPTIIKGAMA 858 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 +R R ++ L A+ A++KL I+ + + Sbjct: 859 RRIVRESIAEEERLLYVAMTRAREKLIITGVVKDA 893 >UniRef50_Q71X99 ATP-dependent helicase/nuclease subunit A n=17 Tax=Listeria RepID=ADDA_LISMF Length = 1235 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 63/632 (9%), Positives = 171/632 (27%), Gaps = 124/632 (19%) Query: 385 EVEVLHDRLLAML-----------EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 E + ++ M+ +++ + RDI+++ + S A + Sbjct: 555 ESRAIAMKIKEMIDNKFPIFDKKMKQNRPIQYRDIVILARAMTSAPDM-----EEAMKVQ 609 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P+ ++ + I+L+ + D+ + + A+L P++ + EE L + Sbjct: 610 DIPFYANNNSGYFETTEVATMIALMKVIDNPYQDIPLAAVLRSPII----GLNEEELGQV 665 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R + + ++L Y + Sbjct: 666 R-----------------------------------------MAKKNGYFYDALLTYKD- 683 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF-FLPDAETEAAMTLI 612 ++E ++ + QLN WR L+ L + N + F+ Sbjct: 684 -TTVSETADKMSDFIQQLNNWRE-LSIRENLTSLIWQIYQETNFYEFVGGLPGGKQRQAN 741 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS--QRFLAGPVNICTLMPMRSI 670 + + + + L R D + V + T+ + + Sbjct: 742 LRALYDRANQYEKTSFRGLFRFVRFVERLEVRGDDLGTAKTLGEKEDVVRMMTIHASKGL 801 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQK-----------------------PKRGDRS 707 F VV + G++ + + L ++ R Sbjct: 802 EFPVVIVSGLS-RKFNMRDIYSKTLLDKDYGFASNYRDIEKMIVYPTIMQQAMKQKKSRE 860 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRS-----------IQDNSERFPSV-------LVQ 749 ++ + AL A++KL ++ ++ P+ + Sbjct: 861 MIAEEMRVLYVALTRAEEKLILTATVPDFEKTSKNWLQVAKEKETILPASTRAKAKCYLD 920 Query: 750 ELIDYIGQSHYLPG---DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW 806 + + + +E + ++ +++ + + + + + +E Sbjct: 921 WIGNATIRHPNFKELLCEEMIQTLPTDMKLQIEIKTKEMFLTNELEKTETVNWLENIKEH 980 Query: 807 LP---AASQAGKAHSEFVQPLPFTLPETV----PLETLQRFWAHPVRAFFQMRLQVNFRT 859 P + + + + L+R ++ L+ + Sbjct: 981 QPIPVKSPYKDEIQRYMNYEYQNEEATEIRAKQSVTELKRQFSLQDSWSDTTLLKEFQKV 1040 Query: 860 EDSEIPDTEPFILEGLSRYQINQQL-----LNALVEQDDAERLFRRFRAAGDLPYGAFGE 914 + L L L ++D E+L + R L Sbjct: 1041 SLDRPKFLQQNKLSATEIGTAMHTLMQAVSLEHQPTKEDLEQLLQTMREKDILTEAQLKA 1100 Query: 915 IFWETQCQEMQQLADRVIACRQPGQSMEIDLA 946 I + + + + ++ E+ + Sbjct: 1101 INIKQVLGFFESQLGKTMLQKKDLVKREVPFS 1132 >UniRef50_B5CL82 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B5CL82_9FIRM Length = 758 Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats. Identities = 81/594 (13%), Positives = 172/594 (28%), Gaps = 109/594 (18%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA---------SW 303 D ++ LL +++ + + Q+ + + L A SW Sbjct: 198 DLLRVSTLLLKEQDAFIPKWIIVDEVQDSDKMQMEFLEALKGRETKLFAVGDPNQVIYSW 257 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 G + +LL ++E V+ + L+ + L+ Sbjct: 258 RGTGENMFFLLKHRFEAKEYSLPVNYRSNALILGAANHFLQF---------------GSQ 302 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 R I + P +E E L R+ + ++ LT R++ V + + Sbjct: 303 IRASREKGEKIKIVNYYDPFQEAEELELRIREL--KEQGLTYREMAVFYR-LQRQVDVLA 359 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 VF + +PY +S +++ PVL F+ +L + + +A + F Sbjct: 360 KVFER----QGIPYEVSVKKSLHDIPVLNWFVRVLRFCVNPLDEQSGIAAVA-DKEFGEF 414 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 +T + + E Q T G M+ + E Sbjct: 415 GMTR--------------KKAEKIIKEKKLSESLLYEQMTGFQAWVVDNFGKFMKEGEKE 460 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 Q + Y + V + ++ + + L ++ R+ LN+ Sbjct: 461 -QKIFEYFHLKEFLRPTVESYTENVKKIKSFLKQLCSYCGSIDFRGHLREFLNS------ 513 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 + + E + G + V + T Sbjct: 514 ----------SELYGLKMEAGEKEVGAEMNPED------------------RKDAVQLMT 545 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISA 723 L + + F V L+G+N G+ P + +++R LF + A Sbjct: 546 LHASKGLEFDTVFLIGVNPGLIPLHSKNY--------------EQEEEERRLFFVGITRA 591 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQELID--------------YIGQSHYLPGDEALNC 769 + +L +S+ + S ++ + + Q ++A Sbjct: 592 KNRLELSWYTNPGEPGIAGEESRYLKMIPQELLEGMPDEKERWANLQQLKKEVQEKAQEK 651 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 + +A+ KA + Q ++ +E Q K + Q Sbjct: 652 VQEKAQEKAQEKVQEKAQEKVQEKAQKEVQEKEQKELRTELRQEVKLEDQQEQA 705 >UniRef50_A5V9S0 Double-strand break repair protein AddB n=2 Tax=Sphingomonas RepID=A5V9S0_SPHWW Length = 991 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 121/956 (12%), Positives = 238/956 (24%), Gaps = 177/956 (18%) Query: 78 PEIPKESAFNKQSMSWKLMTLLPQLLERE----DFTLLRHYLTDDSDKRKLFQL-SSKAA 132 P P +Q + +L Q + L L D+ + Q+ +++ Sbjct: 94 PIPPAIDPLERQMILARLTAEARQAAGDPIDGGEAIRLAGELGRTLDQMLIEQIPAARLR 153 Query: 133 DLFDQYLVYRPDWLAQWETGHLVEGLGEAQ-AWQAPLWKALVEYTHQLGQPRWHRANLYQ 191 DL V P+ W+ + L W A L + R A Sbjct: 154 DL-----VALPELSEHWQ--RSLAMLDTILTRWPAEL----------AARGRIDLAERRN 196 Query: 192 RFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDI 251 R ++ + P P V GIS+ P + L + + E ++ + Sbjct: 197 RLLDRVARRWRHRPP-PGAVIAAGISSTTPAVARLLGVVARLPEGMVVLPG-----LDTV 250 Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYI 311 D A L + P+ + A + + G WG GRD Sbjct: 251 SDEAEWRALGPHETGEDGARPPRPVESHPQYALKRLLDRMDVGRGEVATWRWGG-GRD-- 307 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 + + A A + P + Sbjct: 308 ----------------------------ARSVRARAIANAMAPAAFTDKWHRLPPAERRL 339 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 S + +P E +V+ L +E ++ D + + A Sbjct: 340 SGVRAIELANPAEEAQVIALALREAIETPGRTA----ALVTPDR-----VLARRVTAHLA 390 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 + S P +++ F +LALL P++ Sbjct: 391 RWGIVADDSAGTPLSLTPAGTLLLAVAEAAAEGFAPVPLLALLKHPLVRR---------- 440 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 + W G ++ + + Y Sbjct: 441 --------------------------GAARGAWLDGARKLDIALRGPRPPAGLDGIARYL 474 Query: 552 ESSGLIAELVGH----LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 A + L R L E L R+ ++ + Sbjct: 475 RDGDGHARRARAPAIDWWDEVRPLLEPLEKAFSARTLAELLAALRETISTLADDAGWSGP 534 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PVNICTLMP 666 + E A + L L +D + ++I L+ Sbjct: 535 DGRAAADLVAEL--EAWAPIGPAAFDPAGLAPTLRLLMDAVAVRPPQGGHPRLSIWGLLE 592 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE----ALIS 722 R ++ L G+N+GV+P +P + + + G + + L A+ Sbjct: 593 ARLQHADLMVLGGLNEGVWPALPSPDPWLAPRIRAELGLPGL---ETRIGLSAHDFAMAL 649 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 +L ++ R + + S L + +T Sbjct: 650 GAPELIVTRARRDAR--APTIASRFWLRL----------------------EAMTGGITR 685 Query: 783 LHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWA 842 H P +R + R P P + + L R A Sbjct: 686 EHRL----PNWAAAIDRPADRRFI----------ARPEPAPPVADRPNVIAVTRLDRLQA 731 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER----LF 898 P + L++ P R + A ++QDD + Sbjct: 732 DPFAFYADAMLRLRPLDAVDADP-------TPAWRGTAVHAVFEAWMKQDDCDPDRLLPR 784 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ-----SMEIDLACNGVQIT 953 + ++ + ++ +ADR+ R G+ ++ + G+ +T Sbjct: 785 AEAMLRDMAAHPVMQALWEPRLIEALRWVADRMREERAQGRRPIAAELDGRVEVAGITLT 844 Query: 954 GWLPQVQPDGLLRWRPSLLSVAQGMQLWL----EHLVYCASGGNGESRLFLRKDGE 1005 G + ++ + + G + F +G Sbjct: 845 GKVDRIDRLADGTLAIVDYKTGKPPSAAQVEAGYAMQLGLLGLIADRGGFDGIEGT 900 >UniRef50_C0GSZ1 Putative uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GSZ1_9DELT Length = 904 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 125/858 (14%), Positives = 237/858 (27%), Gaps = 159/858 (18%) Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKL 306 W DI + ++ L + + + N + + W Sbjct: 89 LWEDIIRQSPHSRGLLHLEETARQAARAWTLFEQWNLQDQQDPALWSSPDHRAFLEWSTA 148 Query: 307 GRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE-LENRAVAGVNIEEFSR----S 361 RDY +E ++ + L +L LEN + +I + Sbjct: 149 FRDYTQGRGWMEEARHTRHVARMFEKGCLPCPAHLVLAGLENLSPVQEHILDVLDGLGCK 208 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 N D +IT ++E+ + LE D I V+V D+ S Sbjct: 209 INHLEPARNDPAITLMPLADREQEMRTCALWVRTKLESDHEQR---IGVVVPDLYSVRQE 265 Query: 422 IQAVFGSAPAD----RYLP-----YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 I F + LP Y +S R +P++ + + LL L E V A Sbjct: 266 IIHTFDAVLHPDTAFEPLPPEKRAYDLSLGRPLSGYPLIRSALHLLDLRLDPLPLETVSA 325 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 +L+ P L G + L + T ++ Sbjct: 326 VLNSPFLK------------------------GAKSETPARSGLETLLRKTREPQISFSF 361 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 L + W ++ LA L + L +P W Sbjct: 362 LLDKAADSSKSWSCLV---------------LARSLKAFQARIKELPSTQPPSAWAQDLD 406 Query: 593 DMLNAFFLPDAETEAAMT-LIEQQWQAIIAEGLGAQY-GDAVPLSLLRDELAQRLDQERI 650 +L P T ++ Q + A + G + +S L++ L++ Sbjct: 407 LLLQDLGWPGDITLSSHEYQTVQAFNACLKRLAGLDRVMPSTGMSQATQTLSRILNETIF 466 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS-----QKPKRGD 705 V I ++ S F + ++G+ D +P+ P F +S P+ Sbjct: 467 QPEPPEVRVRIMGMLEAESESFDELWIMGLTDQAWPQSPEPSPFLPVSLQKHLDMPRSSP 526 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE 765 + D R + L + + +SY R +++ E PS L++E+ PG Sbjct: 527 QHELDYARRIMHRLLQNTSRA-ILSYPCR--EEDLELLPSPLLREISGL---EFNEPGLL 580 Query: 766 ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 + L A A+ G Q L Sbjct: 581 PDPDPWAGLSPGEQLKYFQNEQ---------------APPLSQASRAPGGTGVLRSQAL- 624 Query: 826 FTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL 885 P +AF + R+ E L R I L Sbjct: 625 -----------------CPFQAFARHRMHARSLEEP-------VVGLGPPERGIIMHAAL 660 Query: 886 NALVE-----------------QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLA 928 + Q + + + R F E + + +Q L Sbjct: 661 EYFWQSCRDQAALLNLTGDRRLQMIDQAVDQAIREMHSQRPQTMTSRFQELERERLQDLL 720 Query: 929 DRVIACRQPGQSMEI-------DLACNGVQITGWLPQVQPDGLLRWRPSLLS-VAQGMQL 980 +A + Q ++ +++ NG+++ ++ R M Sbjct: 721 QEWLALEEQRQPFQVQELEKRSNISINGLELNVVADRMDRLEDGRLVVIDYKSGRHAMSE 780 Query: 981 W-------LEHLVYCASGGNGESRLFLR--KDGEWRFPPLAAEQAL-------------- 1017 W + +Y + ++ + GE F L E + Sbjct: 781 WFKKRPVEPQVPLYTLFCPEHVAGVYFGVVRKGECAFVGLGQEDGIVPGCKGFASHKLTS 840 Query: 1018 --HYLSQLIEGYREGMSA 1033 + +L++ +++ + Sbjct: 841 HYQHWDELLQDWKKSLEK 858 >UniRef50_Q6CK20 KLLA0F14234p n=1 Tax=Kluyveromyces lactis RepID=Q6CK20_KLULA Length = 1064 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 70/628 (11%), Positives = 157/628 (25%), Gaps = 96/628 (15%) Query: 185 HRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA--LGKHIEIHLLFTN 242 H + +R E A T +F + Y L L ++ L Sbjct: 166 HPDMILKRISELKADAITPEKYEQQAIFDEALLHFYQQYQAKLSKEHLIDFDDVMLYSFE 225 Query: 243 PCRYY--WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 + W +IK T + + S + VG+P Sbjct: 226 LLSKHRVWKNIKHVLVDEFQDTNLLQIHLIFQFARGSHHSCEGVTV--------VGDPDQ 277 Query: 301 ASWGKLGR---DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 +G ++ ++ + + IL++ + Sbjct: 278 GIYGFRSALSHNFQTMIELCPIEYDQIVLKENY------RSAQAILDISETVIKQQKSGR 331 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 +R + + + + S E + +L + +D ++V S Sbjct: 332 DNREPLRAQFVTDNKPV-YMSFPSDDTEAYTITKEILYLKAIPGLFKYKDFAILVRLKRS 390 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 F +A +PY I +A I +S+ + E + ++ P Sbjct: 391 LRT-----FENALIAHKIPYVIQKGYTFWELKECKAIIRYMSMICNDDDWESLKRTINYP 445 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + E + + + + + + Q R + + +M Sbjct: 446 ----NRGVGETTVGKIAAAFEK-------ESTAEKNETAFSFLQKIARDSVKINISNSSM 494 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGH--LASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 + + + I G +A + + Q +P + Sbjct: 495 IGIKDYVNIIEQVRKFFSEIYSDAGKSTIADAFEKFYVLTGLRGQYKP-----EKKSGSI 549 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA-----VPLSLLRDELAQRLDQERI 650 + + + + + V L E D Sbjct: 550 ASDDQSTEKEAHRHLNVLN-VKNYFSTFKIPLGDGDGEPRIVDLIGFCHEFVSFTDLYTF 608 Query: 651 ---------SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 V + T+ + + + VV + +G+ P + Sbjct: 609 NEDNDNDVKDDHETKDAVVLSTIHASKGLEWPVVFVPQCVEGLLPSYYKDSSDMPAPDED 668 Query: 702 -------------------------------KRGDRSRRDDDRYLFLEALISAQQKLYIS 730 K+ R+ ++R +F AL A+ LYI+ Sbjct: 669 SDENMAVGDAYNEPTDSQDDNRDGKNPSSPTKKKSRTSFSEERRMFFVALTRAKYLLYIT 728 Query: 731 YIGRSIQDNSERFPSVLVQ-ELIDYIGQ 757 + + S ++ E+I+ Sbjct: 729 TVEKEATSFK----SRFLKNEVIELCDD 752 >UniRef50_C0FWK5 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FWK5_9FIRM Length = 734 Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats. Identities = 52/420 (12%), Positives = 118/420 (28%), Gaps = 73/420 (17%) Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 I + P +E + L R+ + L R+I + + +F Sbjct: 308 RESGDKIQIRNMYDPFQEADYLAGRIRELHAS--GLPYREIAIFYRLQNQ-----SEIFE 360 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 +P+ +S ++ + PVL+ I +L + +A L ++ Sbjct: 361 HVFEKEGIPFEVSLKKTVKDIPVLDWLIKVLRFSVNPKDKSSGIAALA--DKKYGDGMSV 418 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + ++E+ Sbjct: 419 KEAEKTINILSETRKT-------------------------------------------- 434 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP-LEEWLPVCRDMLNAFFLPDAETE 606 ++ L +E + + ++ + + A ++ L E L + N A Sbjct: 435 ----QTEILKSENAKSGSDICEKMLEFSKVYASKQVALPEDLWSYFSLENHLHPTTASYV 490 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ-RLDQERISQRFLAGPVNICTLM 665 T + + +I Q S + + ++ + V + TL Sbjct: 491 EDRTYVMDFFTRMITYQKEQQKNVVEGFSEFLNMASLYGMNILKKEIHNENDTVKLMTLH 550 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + F V + G+N G+ P Q + + LF + A++ Sbjct: 551 ASKGLEFSHVFITGVNYGLIPLQTKSFEEEEEE--------------QRLFFVGITRAKE 596 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 L +SY Q + PS ++ + + + + + + R H Sbjct: 597 HLELSYYTSPGQYRAAPGPSRYLRMIPGNLVEGQEKDRESSATHLQDLKRQILAERGEHR 656 >UniRef50_UPI0001AF17D7 superfamily I DNA/RNA helicase n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=UPI0001AF17D7 Length = 921 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 108/840 (12%), Positives = 215/840 (25%), Gaps = 184/840 (21%) Query: 178 QLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIH 237 + RW + LYQ+ + L GL V G+ Y+Q L + + Sbjct: 139 EKPLRRWVNSKLYQQVMAILREDDVDLDGLRPDV-ADGLD----KYMQLLSDRA-YFDYT 192 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 + N D D + L ++ + N Q G G Sbjct: 193 AILHNA-AVLLNDDNDEGDESVLDLQRHVKETVKYVVVDEYQDTNPVQEQLIRGLTRHGA 251 Query: 298 PL-------LASWGKLGRDYIYLL---SDLESSQELDAFVDVTPDNLLHNIQSDILELEN 347 L + G +L + + + + + ++ + Sbjct: 252 NLCVVGDDDQTIYQWRGSAVDNILTIEDRYPNVHRVTLNENFRSSSAIVDLA---RHVVE 308 Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML---------E 398 R AG + + + + + D + + E L +R+ + Sbjct: 309 RIPAGERLNKAMTAAGHQTFERGD--LLAQEFPDTEAEATWLVERMERLRGVPFHDREGS 366 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 E L D V+ + + + + R +PY I P ++A ++ Sbjct: 367 EPRGLDWSDFAVLFRSVKADAGPL----VEELRSRGIPYVIKGLTKLFETPEVQAAVTCF 422 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 +DV+ + A + E +R Sbjct: 423 RFVAGLADEQDVVDAW----VDAGVGLAEGDVRA-------------------------- 452 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 G + +A +W + P+D L G L + L Sbjct: 453 ---------------GLPVLTAAMQWDASKPWD-----STTLQGVFLEFLEAVE-----L 487 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAM-----TLIEQQWQAIIAEGLGAQYGDAVP 633 +ER E + L F + E + + Y Sbjct: 488 REERVPNERGELVYYNLGRFSTAIGDFERIHLTSEPQQRFDAFAKWVEHQAPDYYE---- 543 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 + + + V I T+ + + + V L + +P Sbjct: 544 ------------ESDGDNGYAQPNAVVIATVHQAKGMQWPAVFLPALRKNTFPASGRGGL 591 Query: 694 --FDLMSQKPKRGD---RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 F ++ ++ G R D+R LF A+ AQ+ L +S+ + +R S Sbjct: 592 GVFHVVEEELIPGAARYRGTEADERRLFYVAVTRAQKYLALSFAPSDKRTGKKR--SDFF 649 Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP 808 E G RE +P Sbjct: 650 NE--------------------------------------------ATGVHTVLTREVIP 665 Query: 809 AASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTE 868 + P + L+ + P ++ E Sbjct: 666 SPDDRLTPTPRRGTP-----EVVMSFSDLKYLFECPYSF------KLRLLYGFDSPLQKE 714 Query: 869 PFILEGLSRYQINQQLLNALVEQD--DAERLFRRFRAAGDLPYG--AFGEIFWETQCQEM 924 + L + + ++ +E D E +LP+ A + + Sbjct: 715 LGFGKSL--HDVMAEIHKRAIEGDIATPEEAEDLVDRHLNLPFANKAAADQLRPAAETAV 772 Query: 925 QQLADR----VIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL 980 ++ +R + R Q +EI GV +TG + ++ ++ Q Sbjct: 773 RRYLERHGATLHQTRYSEQPVEIH-PVPGVTVTGRVDLIKRLDTNETSVVDFKSSERAQA 831 >UniRef50_A8ZXL9 UvrD/REP helicase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZXL9_DESOH Length = 1132 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 62/543 (11%), Positives = 133/543 (24%), Gaps = 103/543 (18%) Query: 250 DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE---QDVGNPLLASWGKL 306 D+ + + +QR E ++ + +G+P A +G Sbjct: 660 DLLEGHKDVRQTAQQRFVYIFVDEYQDVNHAQYRLIQALAPAGGNICVIGDPDQAIYGFR 719 Query: 307 GRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRP 366 G S+ F P ++ + + A ++ D R Sbjct: 720 G----------ASAAYFQTFETDYPGAARFFLEKNYRSTQTIVSAAYHVITGQDDDPGRV 769 Query: 367 LDPLD----SSITFHVCHSPQREVEVLHDRLLAML---------------EEDPTLTPRD 407 D +T S + E + M+ E L D Sbjct: 770 RVYSDIAGVPVVTVARLASERAEAVFAGRTIERMVGGLGFHSVDFGKAGYEAPAGLGFAD 829 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 V+ VF +P + ++ + + ISLL L + + Sbjct: 830 FAVLCRTRRQ-----TEVFADVLESAGIPCHVVSKQRIYAARGVGEAISLLRLAEGQATF 884 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 D+ G+ +G + + + Sbjct: 885 IDLE--------------------------KAGGVLYGATAAKKQAVISAWAKERNLPAA 918 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 E + GL LA + + P+ Sbjct: 919 ---------------EVLAATERFPVPGLSQAAQRRLAGAARTVAELKAR-TGHLPVAGR 962 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 L + + ++ + A + D L Sbjct: 963 LRFLIENMEPLATLVNGSKKNREAF--------DAAVEAARPAGTDATAFFD--TVALAA 1012 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + + V + TL + + F VV + G + + P + Sbjct: 1013 DADAVMPGVDRVRLMTLHAAKGLEFAVVFVAGCEEDLVPFSGYGDR------------AT 1060 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP--SVLVQELIDYIGQSHYLPGDE 765 D++R LF A+ A+++L++++ + S V ++ + + + Sbjct: 1061 DIDEERRLFYVAMTRAKERLFLTWAKNRTLYGKRKACTLSRFVADIEGDLKEQAEVETGR 1120 Query: 766 ALN 768 Sbjct: 1121 PPK 1123 >UniRef50_Q65LJ9 ATP-dependent helicase/nuclease subunit A n=3 Tax=Bacillus RepID=ADDA_BACLD Length = 1230 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 72/641 (11%), Positives = 162/641 (25%), Gaps = 133/641 (20%) Query: 385 EVEVLHDRLLAML-----------EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 E + ++ ++ + + RDI+V++ + ++P I F + Sbjct: 549 EARAMAGQIRRLITEKFQVYDAKAKASRNIQYRDIVVLLRSM-PWAPQIMDEFKQ----Q 603 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P + + +SLL + D+ + + ++L PV+ + E L + Sbjct: 604 GIPVYANLSTGYFEATEVSVTLSLLKIIDNAYQDIPLASVLRSPVV----GLDENELSLI 659 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R + ++++ Y + Sbjct: 660 R-----------------------------------------IKDKKAPFYEAMKAYLAA 678 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 + L L L WR E + RD ++ Sbjct: 679 ADGDERLSEKLRRFDGLLKKWRAYAKNHSVAELIWEIYRDTKYLDYVGGMPGGKQRQANL 738 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPVNICTLMPMRSIP 671 + + + + +R D ++ V + T+ + + Sbjct: 739 RALYDRARSYEATSFRGLFRFLRFIERMQERGDDLGTARALSEQEDVVRLMTIHSSKGLE 798 Query: 672 FKVVCLLGMNDG----------------------VYPRQLAPLGFDLMSQKPKRGDRSRR 709 F VV G+ ++P+ + K+ R Sbjct: 799 FPVVFTAGLGRNFNMMDLNKSYLLDKELGFGTKFIHPKWRISYPTLPLIAMKKKLRRELL 858 Query: 710 DDDRYLFLEALISAQQKLYISYIGRS-----IQDNSERFPSVLVQELIDYIGQSHYLPGD 764 ++ + AL A++KLY+ + ++ S + + YL Sbjct: 859 SEELRVLYVALTRAKEKLYLVGTAKDKEKLLADWRTQAAGSEWLLPDYERFQAKSYLDFI 918 Query: 765 EAL-----NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA---------------- 803 + DES A H F + Q+ A Sbjct: 919 GPALMRHRDMDESGAPPVIDEIREHPAR-FQVSWLSAADLQAEAVDQAGEERHDRLVQIQ 977 Query: 804 --REWLPAASQAGKAHSEFVQPLPFTLPETV----PLETLQRFWAHPVRAFFQMRLQVNF 857 A + P+ V + ++R + + Sbjct: 978 MGHAIEGAFEYEQQVRERLAWSYPYKDAAKVRTKQSVSEMKRQKE----YEDEYGDRSLI 1033 Query: 858 RTEDSEIPDTEPFI-----LEGLSRYQINQQL-----LNALVEQDDAERLFRRFRAAGDL 907 R + P L R + L E+++ RL R L Sbjct: 1034 RPSQEALLFKRPSFMMAKGLTAAERGTAMHTVMQHIPLTRTPEKNELSRLLDRLVEKELL 1093 Query: 908 PYGAFGEIFWETQCQEMQ-QLADRVIACRQPGQSMEIDLAC 947 I + ++ ++ R+ + + ++ Sbjct: 1094 TEDQRAAIEEDDILAFFDTEIGQKLFGARRVEREVPFNMTL 1134 >UniRef50_A3CVM7 UvrD/REP helicase n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CVM7_METMJ Length = 1080 Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 81/683 (11%), Positives = 166/683 (24%), Gaps = 157/683 (22%) Query: 378 VCHSPQREVEVLHDRLLAMLEEDP----------TLTPRDIIVMV--ADIDSYSPFIQAV 425 + E E+ ++ +++E D+ V++ +Y Sbjct: 491 RAAGRRAEAEMAARKIRSLVERGEKRVSRDGEVRPAGYGDVAVLLERRTNLAY------- 543 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 + A A +PY + + ++L + + +L P F Sbjct: 544 YEWALARYGVPYHVHAGLGFYERQEVYDLYNILRFLANNLDDAALYGVLRSPY----FGF 599 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 ++ L ++ + S L + R R+L ES Sbjct: 600 SDARLFHIARAPGASLWERLQAAAEPAAATLREWLSLSRRLPPARLLRRIVDESGIFVVF 659 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 + E + E + LA + Sbjct: 660 GGMAGGEQAAANVEKLIALARDAD------------------CSTLAGFVAELGRSIDAG 701 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLM 665 + + L+ A V+I T+ Sbjct: 702 DRE-------------------GDAPLDLA-------------------SADSVSIMTVH 723 Query: 666 PMRSIPFKVVCLLGM-------------NDGVY-------PRQLAPLGFDLMSQKPKRGD 705 + + F VV + + DG+ P + + K Sbjct: 724 AAKGLEFPVVVVPDLAETPRSGGGTIMVEDGLLLGVSIPNPANDHEREETPVLRLLKDEY 783 Query: 706 RSRRDDDR-YLFLEALISAQQKLYISY-----IGRSIQDNSERFPSVLVQELIDYIGQSH 759 R + + +R LF A+ A+ L + + S++D R ++ Sbjct: 784 RQKEEAERKRLFYVAVTRAEDHLILCGEMPVAVPESLRDARTRMA---------WLAHCL 834 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 L + + ++ +T +P D Q LP A Sbjct: 835 GLCDEVYARGEAVLGTLRIPITLDPAAIPVDVQE--------TVPVCLPVPDDVPAAPVP 886 Query: 820 FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 P L+ + P + RL V E + L+R Sbjct: 887 AGIPSNGKKERVYSASELEAYLRGP----AESRLPVFAAGE------------DALTRGL 930 Query: 880 INQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ 939 + ++ D + RR G P GA L ++ + Sbjct: 931 VVHEVF----RGRDPAAVLRR---YGLDPAGAVEYQEL-YVRFLASPLMRGIVR---DHR 979 Query: 940 SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLS-------VAQGMQLWLEHLVYCASGG 992 + NG G + ++ W +Q+ + H Sbjct: 980 EVPFSARVNGFAFRGVIDRLVQRVNGTWMLIDYKTGTPGDAGEYAIQMAVYHRAAAQILS 1039 Query: 993 NGESRLFLRKDGEWRFPPLAAEQ 1015 + D + R+ + ++ Sbjct: 1040 APVTPYLYFVDAD-RWAEIEVDE 1061 >UniRef50_Q97JY0 ATP-dependent DNA helicase, uvrD-like n=1 Tax=Clostridium acetobutylicum RepID=Q97JY0_CLOAB Length = 609 Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats. Identities = 50/442 (11%), Positives = 133/442 (30%), Gaps = 96/442 (21%) Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQ----SDILELENRAVAGVNIEEFSRSDNKRPL 367 L+ + Q + +F +P L+ + + IL L+ + NI + S K Sbjct: 212 NLICVGDVRQAIYSFRGSSPQFFLNFDKEFNGAKILHLDINYRSKKNIVDKSNKFIKPYF 271 Query: 368 D------------PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 + I + + E E + + + + + P +I V+ Sbjct: 272 KDYKYYSDSIANFKDNGEIKYFSFVNKLEESEKISNLIKEKITKGED--PNNIAVLYRLN 329 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 D + +PY I + + + + L L + L + + Sbjct: 330 DD-----SSYLECVLRRDKIPYYIENDSSFFKRKEIAGIMGYLRLIQNSKDDGAFLDVWN 384 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 + + ++ ++ L +R+ Sbjct: 385 LRNIPLKY-MSGTILSDIRK---------------------------------------Q 404 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP--VCRD 593 +++ + ++ D + + +L + ++ ++ +++ + Sbjct: 405 SVKENKSYFEIFKKMDFNKMFQIRSRNDFIKSIEKL-KHKNKVSIKQLIDDIVKEFNLYQ 463 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 + + P+ + + ++ I L D + + + Sbjct: 464 WIKEKY-PNKDEQEERKGSIDVLKSFIV---------NDDLQFFIDFVQTSNMNIKKKDK 513 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 V + ++ + + +K V ++G+ D +P R+ +++ Sbjct: 514 ---DGVKLMSIHRSKGLEWKSVFVIGIQDTRFPN-----------------ARNGLNEEA 553 Query: 714 YLFLEALISAQQKLYISYIGRS 735 LF A A + LY+S IGR+ Sbjct: 554 RLFYVATTRAIENLYLSEIGRN 575 >UniRef50_UPI0001C41A7D ATP-dependent DNA helicase UvrD/REP family n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41A7D Length = 1565 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 72/691 (10%), Positives = 201/691 (29%), Gaps = 76/691 (10%) Query: 337 NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 + I+++ + E ++ D LD + F V + + E + + + + + Sbjct: 319 RSANQIIDISEDFIKSQR-AEGAKQDKALGARDLDRNTYFLVNENSESEAKAIFEMIRYL 377 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + +I ++ I +S Q + D +PY + P + + I+ Sbjct: 378 HDSGKIENYNEIAILSRSI-RFSNTAQDLI-QLFIDNNIPYHVRGVPDLFDRPEIRSVIT 435 Query: 457 LLS-LPDSRFVSEDVLALLDVPVLAAR-----------FDITEEGLRYLRQWVNESGIRW 504 L+ L + L ++ L + F++++E + + + E Sbjct: 436 LIHHLIEDTNPHNHKFDLWELEWLNLKAYTGESFNQVLFNLSDET-KNILNSIQEEFEEN 494 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 + ++ L++ H + F + + + +E+ Sbjct: 495 VLKEEKRAYLKVTGKKSHKYVFKRVFERDEKVLIELFKNIERPILSNENLIRYGVKNKQD 554 Query: 565 ASLLMQLNIWR------RGLAQERPLEEWLPVCRD----MLNAFFLPDAETEAAMTLIEQ 614 +LN + + E + + L F+ D + + Sbjct: 555 LEFFRRLNDLKAYFNSEEYMDSEDTILDIYMKLLTDVCNYLTEDFINDPINRDELKNLAI 614 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 L + + + V + T+ + + F V Sbjct: 615 LSNTFHNYELIVDNKNLKGAYYFLRYNIAGYSTDND----ESEGVQLMTVHKSKGLEFPV 670 Query: 675 VCLLGMNDGVYPRQLAP--LGFDLMS--------QKPKRGDRSRRDDDRYLFLEALISAQ 724 V LL +N +P Q F + + + +++ + A+ AQ Sbjct: 671 VILLSLNHKKFPSQYKDEYDRFYTPNSCLEYKNYDSKEEEIQDYLEEEDRIVYVAMTRAQ 730 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 L +S + + + ++ L + + + D + +K H Sbjct: 731 DILVLSNLIKETPE---------LEGLKAELNDNLSQIEKIEIIKDIPKGHIKIHDLINR 781 Query: 785 TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHP 844 + + +++ + +F+ + +L+ + A P Sbjct: 782 NLS--SCKFLEDD----FSQLPKTVCEKPQVKKEDFLN---------LSFYSLENYVACP 826 Query: 845 VRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL---NALVEQDDAERLFRRF 901 + + + F+ L IN ++ N + D+ +F RF Sbjct: 827 FKYKLMHDINFSES-TMEFNKLRGLFVHNLLE--TINNRIRSNGNRYIGDDEVLAIFERF 883 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQLADRV-IACRQPGQSMEIDLACNGVQITGWLPQVQ 960 + + + ++ ++ + + + ++G + + Sbjct: 884 QDSFRFENLRLSKKEYDIIKNDVLYYYNTFGKDFNILNTELSFSIKKEYYGLSGIIDLIY 943 Query: 961 -----PDGLLRWRPSLLSVAQGMQLWLEHLV 986 G+L ++ + +Q +++ + Sbjct: 944 KTKDGKMGILDYKNTERISRHYVQNYIKQVY 974 >UniRef50_C8SXN2 Exodeoxyribonuclease subunit V gamma (Fragment) n=4 Tax=Enterobacteriaceae RepID=C8SXN2_KLEPR Length = 170 Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats. Identities = 119/165 (72%), Positives = 140/165 (84%) Query: 958 QVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQAL 1017 QVQPDGLLRWRPSLLSV+QGMQLWLEHLVYCASGG GESRLF+RK+GEWRFP LA +A Sbjct: 3 QVQPDGLLRWRPSLLSVSQGMQLWLEHLVYCASGGTGESRLFVRKEGEWRFPALAPAEAQ 62 Query: 1018 HYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEG 1077 YL++L++GY GMS PLL+LPESGGAWLK CYDA+ D +L D+ T QKAR+KFLQ YEG Sbjct: 63 AYLNELVDGYLLGMSQPLLLLPESGGAWLKACYDAEKDVILMDEETQQKARSKFLQTYEG 122 Query: 1078 NMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS 1122 NM+V GEG DIWYQRLWR L P E I+ Q+QR+LLPL+R+++S Sbjct: 123 NMVVSGEGADIWYQRLWRSLEPAHYEEIIAQTQRYLLPLYRYHRS 167 >UniRef50_C4Z991 DNA helicase II n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z991_EUBR3 Length = 1220 Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats. Identities = 48/420 (11%), Positives = 113/420 (26%), Gaps = 95/420 (22%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED----- 400 E + ++ ++ D + E ++ +R+ +++E Sbjct: 510 ETMRPELLLVDYKDEDLSEIIEDEDGDKVQI--------EALLIANRIRSLMENGMVTDK 561 Query: 401 -----PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 + RDI+++ + ++ + AV D +P + S ++ + Sbjct: 562 KTGQLRAVQYRDIVILSRSVATWGNTVAAV----LKDCDIPAHVESNTGYFSSYEIQVIL 617 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 S+L + D+ + A+L P++ + +E L +R Sbjct: 618 SMLRILDNPLQDIPMAAVLASPIV----GMDDEELAQIR--------------------- 652 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 A ++ ++ G E + A + +L Sbjct: 653 -SAFKGVSFAQA------------------ALSAMAGEDGYEDEKLKAFALVFERLRGAV 693 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 L L + + I + A Y Sbjct: 694 ADTPIHELLYMMLD--ETGFYRYASAMPAGKRRRQNI-DMLIEMAAAYEKTSYKGLFHFV 750 Query: 636 LLRDELA--QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL---------------- 677 D + E + V I T+ + + F VV + Sbjct: 751 RYIDIQQKYEIDYGEADTAGENDDVVRIMTIHKSKGLEFPVVFVSGLGKSFNTQDTKSDL 810 Query: 678 -------LGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 LG+ + + ++ R R ++ + AL A++K+ ++ Sbjct: 811 VIHEKLGLGLVEKTK-SPRTKRPSLIRNEIESRIKRENLGEELRVLYVALTRAKEKIILT 869 >UniRef50_A5D1P3 ATP-dependent helicase/nuclease subunit A n=2 Tax=Peptococcaceae RepID=ADDA_PELTS Length = 1269 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 54/394 (13%), Positives = 107/394 (27%), Gaps = 96/394 (24%) Query: 385 EVEVLHDRLLAMLEEDPT-----------------LTPRDIIVMVADIDSYSPFIQAVFG 427 E ++ R+ +L P LT RD+ V++ Y+ F Sbjct: 586 EARLVARRIKELLGGSPGGEHALEIYDRELKKYRPLTYRDVAVLLRATAGYAN----SFV 641 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 +P +E ISLL + D+ + +L P + + Sbjct: 642 EEFRREGIPAYAELSTGYFESTEVETVISLLKVIDNPRQDIPLAGVLRSPAV----GLKA 697 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L +R + S +G++ Sbjct: 698 GDLARIR------------------------------------------LASPRGDFYDA 715 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAET 605 + +G EL LA L +L WR +A++ L + + F Sbjct: 716 VVAASLAG-QGELSERLADFLKKLEEWRT-IARQGTLADLIWAVYRDTGYYDFTGCLPGG 773 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ--RFLAGPVNICT 663 + + + + L + ++ V I + Sbjct: 774 GQRQANLR-ALHDRARQFETTAFRGLFLFLRFIERLREGGRDFGAARLLSEKENVVRIMS 832 Query: 664 LMPMRSIPFKVVCLLG---------MNDGVYPRQLAPLGFDLMSQKPKRGDR-------- 706 + + + F VV + G +N V + LG L+ + + Sbjct: 833 IHKSKGLEFPVVFVAGLGRNFNFRNLNKAVLFHKDLGLGPQLVDAEARVTRPTAAKLALK 892 Query: 707 -----SRRDDDRYLFLEALISAQQKLYISYIGRS 735 ++ + A+ AQ+KL + R+ Sbjct: 893 HRLKMEALAEEMRILYVAMTRAQEKLILVGSARN 926 >UniRef50_B0TDI0 ATP-dependent helicase/nuclease subunit A n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=ADDA_HELMI Length = 1396 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 53/391 (13%), Positives = 109/391 (27%), Gaps = 80/391 (20%) Query: 381 SPQREVEVLHDRLLAMLE--------EDPTLT---PRDIIVMVADIDSYSPFIQAVFGSA 429 + Q E + R+ +++ E RDI++++ + +F Sbjct: 660 TAQYEARLAARRIEELMKSAMPVYDREQGGYRPVCYRDIVILMRSTKGRAD----IFLEE 715 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +P + +SLL + D+ + A+L P+ F T E Sbjct: 716 FRAAAIPAYADTGAGYFEATEVSILLSLLRVIDNPCQDIPLAAVLRSPI----FRFTGED 771 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L +R A + T+ + + G A +A+ + + P Sbjct: 772 LARIR----------------------LAEPRKTFFDAIEAFI-GQAEAAARDTFTPIDP 808 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETEA 607 L L Q++ WR LA+ L + + + Sbjct: 809 VAI----------RLREFLRQIDAWRT-LARRDSLAKLIATIYRETGFYDYAGAMPGGGQ 857 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ--RFLAGPVNICTLM 665 + + + L + ++ V I ++ Sbjct: 858 RQANLR-ALYDRARQYEATTLRGLFRFLRFIERLQDQGGDLGTARTLGEKEDVVRIMSIH 916 Query: 666 PMRSIPFKVVCLLGM-----------------NDGVYP-----RQLAPLGFDLMSQKPKR 703 + + F VV + G+ N G+ P + +R Sbjct: 917 KSKGLEFPVVFVAGLGSQFNLQDLRRDLLIHKNLGLGPVVVDTQLRYRYPTVAKLAIQRR 976 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 R ++ + AL A++KL + R Sbjct: 977 LHRETLAEEMRILYVALTRAKEKLILLGTVR 1007 >UniRef50_Q2J6E2 UvrD/REP helicase n=1 Tax=Frankia sp. CcI3 RepID=Q2J6E2_FRASC Length = 1103 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 92/667 (13%), Positives = 167/667 (25%), Gaps = 78/667 (11%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 A + D D + E E + D LL + + Sbjct: 341 PAAGLPVAAIRAHRDLVGRADAGAGQVQARTFPGTGAEAESVAD-LLRREHLENGVAWDA 399 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR-RARQSHPVLEAFISLLSLPDSRFV 466 + V+V + A +P + P + L + Sbjct: 400 MAVLVRTAERIGRL-----RRVLAAAGVPVSADGDDLPVAQEPAAALLLLALRCAEDPAG 454 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID--DDNVRELELPATGQHTW 524 + V A + + GLR L + + G + + L W Sbjct: 455 ALTVDAA-RTLLTSPLGGADPAGLRALGRALRTLERDAGSEHPAPSAELLRAAVAEPDHW 513 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 + L G + +SSG + + L Sbjct: 514 LATIPDDLAGPVRRVGGLLRTAGQALRDSSGAPQDALWALW-----------------SA 556 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP--LSLLRDELA 642 EW R A + + + + A+ G G V ++ L + Sbjct: 557 SEWPARLRHASAAGGAAGRAADRDLDAVVALFDAVTRLGQRRGPGGGVASLVAELTRQQI 616 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ--- 699 + + V + T + + ++VV + G+ DG +P Q Sbjct: 617 AGDVLKPAGESVRRRGVRLLTAHRAKGLEWEVVVVCGVQDGTWPDLRERHSLLGAEQLDA 676 Query: 700 ------KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 +P + D+R LF AL A+++L ++ + D S PS ++EL Sbjct: 677 PSRGGLRPPLTRQDLLADERRLFYVALTRARRRLVVTAVNSPEDDGS--LPSRFLEELGV 734 Query: 754 YIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQA 813 + P L P Q A Sbjct: 735 AVEHVPGRPARPLTLV--GLVATLRRLATEPDSSPVMRSAAQARLAALAAARDQAGRPLV 792 Query: 814 GKAHSEFVQPLPFTLPETVPL-----------ETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 AH + L VP+ +L A +R F + + Sbjct: 793 PAAHPDTWWGLLDPTTSDVPVVPVAGPIRLSGSSLSSIGACSLRWFLEH-----EAYAVT 847 Query: 863 EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR-FRAAGDLPYGAFGEIFWETQC 921 + F ++ L + + L R F + Q Sbjct: 848 PASTAQGF-------GKVVHALADEVTTGRTPADLAALDARLDTVWRQLDFDARWRSDQE 900 Query: 922 QEM----------QQLADRVIACRQPGQSMEIDLACNG--VQITGWLPQVQPDGLLRWRP 969 + A+R DL G VQ+ G++ +++ D R Sbjct: 901 RAAAREALARFLDWHAAERGRRVIDAEVRFSCDLRVAGRDVQLRGFIDRLELDEAGRVHV 960 Query: 970 SLLSVAQ 976 + Sbjct: 961 IDFKTGR 967 >UniRef50_A6LPC4 ATP-dependent helicase/nuclease subunit A n=4 Tax=Clostridium RepID=ADDA_CLOB8 Length = 1245 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 42/400 (10%), Positives = 112/400 (28%), Gaps = 87/400 (21%) Query: 385 EVEVLHDRLLAMLEEDP----------------TLTPRDIIVMVADIDSYSPFIQAVFGS 428 E ++ R+ ++ + L RDI++++ ++S Sbjct: 556 EGRIVAKRIKELMSKSEDEQIFKVLDKESGEYRPLKYRDIVILLRATKNWS----EPLLD 611 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + +P + ISLL + D+ V++++ P++ + E Sbjct: 612 ELSAEGIPVYADTGSGYFESIEIRTIISLLKVVDNPMQDIPVISVMRSPIM----GFSAE 667 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + +R ++ I + + A S + VL Sbjct: 668 EISDIRLVKKDNYFYENI-----------------------KYISEEAYNSINESYSDVL 704 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR--DMLNAFFLPDAETE 606 + + ++ WR + ++E++ + Sbjct: 705 ------------IAKCKYFINSVDKWRNK-SIYMAIDEFIWYLYMDTAYYGYVGAMPNGV 751 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL--AQRLDQERISQRFLAGPVNICTL 664 + + + + ++L + V I ++ Sbjct: 752 LRQANL-KILFQRARQFEKTSFKGLFNFINFINKLIKSSGDMGSAQVLGENEDVVRIMSI 810 Query: 665 MPMRSIPFKVVCLLGM---------NDGVYPRQLAPLGFDLMSQKPK------------- 702 + + F VV L G+ N + LG D + + Sbjct: 811 HKSKGLEFPVVFLCGLGKNFNLMDLNKSILYHDELGLGPDFIDIGKRFSIGTLAKESIKK 870 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 + ++ + A A++KL ++ +++ ++E+ Sbjct: 871 KMKFETLSEEMRILYVACTRAKEKLIMTGTVGNLEKSAEK 910 >UniRef50_C0W129 DNA helicase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W129_9ACTO Length = 1119 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 102/868 (11%), Positives = 218/868 (25%), Gaps = 179/868 (20%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 P +A++ + ++ + E LF VG+P A +G G Sbjct: 225 PTVVAEIRSEYDAVLLDEFQDTSVGQMELLSTLFKDMSVTAVGDPNQAIYGWRGAS-AAS 283 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS-----RSDNKRPLD 368 L + + +IL+L N A + + + + D Sbjct: 284 LDLFPIMFAQQMETKTFSLSKAWRNKENILDLANLISAPLAQKTYPGVDVIKLVASNSED 343 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAM----LEEDPTLTPRDIIVMVADIDSYSPFIQA 424 I+ + E + +++ ++ + ++V + P I+ Sbjct: 344 ADKGKISVFYPATNVEEYRYVAEQVKKWKQTYIDPHSGVNDETYAILVRSRRHFLPMIE- 402 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 A + L A+ + PV+ ++L+ V+ LL D Sbjct: 403 ----ALEAQGLEAAVVGLGGLVTQPVIADLRAILAASIDPLDGPAVMRLLTN------LD 452 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 ++ ++ L W + + +++ G LL + W Sbjct: 453 LSARDIKVLYSWATQL-----------------SKKRNSLEVGRQEFLLDAVDNPPEVGW 495 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 + D +G A + L +L R L + + + + + + + Sbjct: 496 SA----DGGAGFSARGHQQVQLLRDRLAAVRAVLDFD--VSYIVSKAIRVFD--LDVEVD 547 Query: 605 TEAAMTLIEQQWQAIIAEG-LGAQYGDAVPLSLLRDELAQRLDQERISQRF----LAGPV 659 + + L A + A + L+ D L ++ E+ + + + Sbjct: 548 ADPYLNLAGTAVDAFLEIANDYASQTEYANLANFLDWLETTVEAEQGLKAPTAQVDSSVI 607 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPR-------------------------------Q 688 I T+ + + + V ++G+N+G +P Sbjct: 608 QIMTVHQAKGLEWDRVAVIGLNEGGFPSYEGAHFIKYENPATLKSGFSFDARPQSGWLGT 667 Query: 689 LAPLGFDLMSQKPKRGDRSRR----------------------------DDDR---YLFL 717 +A L +L +G+ +R L Sbjct: 668 IADLPHNLRQDYTFKGEAQILPGVPEFDQYEDCDALEAAIEAYRLDLAYYQEREERRLAY 727 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY-------IGQSHYLPGDEALNCD 770 A +++L +S I S + PS + E I + + A N Sbjct: 728 VAFTRPKKELVLSGAWYRIGTKSTQLPSRYLTEGIHAGIVNPTVFADAETTEVEAAENYS 787 Query: 771 ESEARVK-------------AHLTCLHTRMPFDPQNYQPGERQS---------------- 801 S + T R P + Sbjct: 788 FSGPALIWDAPDLDVENLVVNQETTQIPRKPGVSRKLINDSGSRVLSQIAQRLNTSGMEI 847 Query: 802 -----------YAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQ 850 A A E + ++ H Sbjct: 848 TELDFDPADKQQAELIYTAQRALDAYKKRLADKTIEVSVERLSATSVTSLLLHQKEF--A 905 Query: 851 MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYG 910 RL+ E S+ + Q+ A E + + A + + Sbjct: 906 QRLRRPVPAEPSDAALLGTIFHAWAQTW--CQKAGQASAEAEPLQAETAENSAETTVSFD 963 Query: 911 AFGEIFWETQCQEMQQLADRVIACRQPG------QSMEIDLACNGVQITGWLPQVQ---- 960 + + +L +R + L + I G + + Sbjct: 964 PDTLTQKQKLQ--LGKLQERAKEIFTDELSTVVGLEVPFSLKHEQLTIRGQIDVLAKADG 1021 Query: 961 PDGLLRWRPSL---LSVAQGMQLWLEHL 985 ++ W+ L HL Sbjct: 1022 KWRVIDWKTGRPPVLDEKHRENNLSSHL 1049 >UniRef50_Q5YR01 Putative helicase n=4 Tax=Corynebacterineae RepID=Q5YR01_NOCFA Length = 1255 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 62/521 (11%), Positives = 136/521 (26%), Gaps = 84/521 (16%) Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERI 650 R + A A ++ A + + L+Q+ + + Sbjct: 739 RRWVAQSERGGAVGMQADRDLDAAVGLFDAAAAYVDRLPRAGIEGFVEYLSQQEIPHDTR 798 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA-------PLGFDLMSQKPKR 703 V + + + VV + G+ +G++P DL++ Sbjct: 799 PLTTPGEEVALLSAHAAAGREWDVVAVAGVQEGIWPNPRPRGTLLHTEDLVDLLAGVGGA 858 Query: 704 GDRSR-----RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 G+ ++R L L A A++ L ++ S+ + + PS + EL +G Sbjct: 859 GEHVSRSAPILAEERRLLLVACSRARRSLLVT-AVESVTGDRDLVPSRFLAEL---LGHD 914 Query: 759 HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHS 818 D A V L DP R++ + A + Sbjct: 915 EDGEPGVLPVVDPGRALVMHSLVAELRGAVCDPTADPERRRRAAFQLARLADAGVRGTAP 974 Query: 819 ------------EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 + + + T+++ P+R + Sbjct: 975 EEWYGTAELSCADPLWSEEDDAVVALSPSTVEQLRTCPLRWALERHGG---------TDG 1025 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 P ++G + + Q L + E L + +RA D G ++ Sbjct: 1026 DNPHAVKGSLVHTLVQALAGRVPEAQVRAALDKAWRA-IDPGDGWHSRQERRRTEAMLET 1084 Query: 927 LADRVIACRQPGQSMEIDLACN-----------GVQITGWLPQVQPDGLLRWRPSLLSVA 975 V R +++ + V+I G + +++ D R+ + Sbjct: 1085 FLAWVRNTRGELTQAGVEVPVDCVLPARSEDERPVRIRGRIDRLERDEFGRFVIVDVKTG 1144 Query: 976 QGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQA--LHYLSQLIEGYREGMSA 1033 + P++ + A L+ G Sbjct: 1145 K--------------------------------NPISKQAAADHAQLATYQVAAASGALD 1172 Query: 1034 PLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQA 1074 P + ++ + + D A + Sbjct: 1173 PEGEPGGARLVYVAKPHTKEGATQRMQDPLDAAALDSWRDT 1213 Score = 44.0 bits (102), Expect = 0.037, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 36/144 (25%), Gaps = 10/144 (6%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 G+P A + G D + + + + + A Sbjct: 308 AGDPDQAVFTFRGADARFAADPGAPADRRVVLRENHRSGPSVRLAA-----ARIAAKLPG 362 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 + ++ V +P +E ++ D L + + V+V Sbjct: 363 AAPHRPAVAAESGGGDGVAVRVRVLATPAKEAALIADHLRRAHLTG-GVPWSRMAVIVRS 421 Query: 415 IDSYSPFIQAVFGSAPADRYLPYA 438 + P A A +P Sbjct: 422 V----PLSLAPLRRALLAAGVPVH 441 >UniRef50_C0XV86 Helicase n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XV86_9CORY Length = 1018 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 80/672 (11%), Positives = 177/672 (26%), Gaps = 110/672 (16%) Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 VC S + ++ D + + + R++ V+V + I++V A +P Sbjct: 309 VCDSAAAQNSLVADTVRRA-HLEGGVAYREMAVIVRS----ASSIESV-RRALLHAGVPV 362 Query: 438 AIS-DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 ++ ++ A I L + S + LL Sbjct: 363 MVNPTDVVLSEQRIVAALILGLRALEGELSSAEWRELL---------------------- 400 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 G G D +R L + ++ VL E S Sbjct: 401 ---LGPVGGTDPVTLRRLLRGLRRWEPGERAEDTLRHLLRSTQPLPDFGVVLTERELS-- 455 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPL------EEWLPVCRDMLNAFFLPDAETEAAMT 610 ++ H+ +L + E L ++ + + Sbjct: 456 ---ILNHVREVLDAGRAELAHGSIEDVLWAVWNATGLANHLLIAALRGGATGSQADRDLD 512 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL--DQERISQRFLAGPVNICTLMPMR 668 + + A G ++ +++++ R + V + T Sbjct: 513 SVMALFDAAGDYVERRVGGS--DVAGFVAHISEQVLPTGVRDRRTATPDAVAVLTAHGAV 570 Query: 669 SIPFKVVCLLGMNDGVYPRQL-------APLGFDLMSQKPKRGDR-----SRRDDDRYLF 716 F V + G+ + +P DL+ R +++ LF Sbjct: 571 RCEFHTVIVAGVQEMQWPSLAETGTMFGQEELVDLVDNDVDPAVPVSRKAERLAEEKRLF 630 Query: 717 LEALISAQQKLYISYIGRSIQDNSE-RFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 A+ A ++ ++ D E PS V++ + + + + Sbjct: 631 DVAVSRATHRVLVT--AVDEPDGEEVIQPSRFVEDFCTTHDIAPACVTTASTSASPAAGA 688 Query: 776 ---------VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA-------HSE 819 + + R D + G RQ+ + A + A +E Sbjct: 689 EEVTAVRVLARDDVIAELRRALNDSGIGEAGRRQAARQLARLADAGVPGADPEEWWTTTE 748 Query: 820 FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 +PE + ++ A P+R Q + ++ + Sbjct: 749 AASHEALAVPERLSPSRIESLLACPMREVLQRMVGLDSSLH--------------MVWGS 794 Query: 880 INQQLLNALVEQDDAERLFRR-FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR--- 935 + A+ D A + ++ E E + + R Sbjct: 795 MAHAYFEAVGRGVDETFARNAVLEARRSVDDAPQWKVERE--IAEFEAMLQRAHRWLQTS 852 Query: 936 ---QPGQSMEIDLACN---GVQITGWLPQVQPDGLLRWRPSLLS------VAQGMQLWLE 983 ++E D+ G+++ G +++ DG L + + Sbjct: 853 RSAFEQVAVEADIDVEISPGLRVVGRADRIERDGSGALHIVDLKTGSGVPSKDDAEANPQ 912 Query: 984 HLVYCASGGNGE 995 Y + G Sbjct: 913 LEAYQLALSRGA 924 >UniRef50_B7IGH4 Putative uncharacterized protein n=1 Tax=Thermosipho africanus TCF52B RepID=B7IGH4_THEAB Length = 1006 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 63/572 (11%), Positives = 159/572 (27%), Gaps = 76/572 (13%) Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + E+ + ++ ++ + P DI ++ +I I + Sbjct: 275 EVVGYKNVISEIVNVSGKVKKLILS--GVNPSDIAIVAPNIQ-----IAKQIAEKLDEMK 327 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P+ +S V++ + + E++ A L+ P + +T + + L Sbjct: 328 VPFNLSMNVKLSESKVVKMILQPFKTKYFGYDLENIFATLETPFV-DTLGLTMDEIESL- 385 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + + + + Q V E Sbjct: 386 ---------------FKEFSIEEGDFSKSIIEKINERIKELENVEDEDVMQQVEEKKEEY 430 Query: 555 GLIAELVGHLASLLMQLNI--------WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 ++++ +L L +++ + + +E+ L + V + + E Sbjct: 431 LKFSKVLENLFGLFEEIDKNINGDFLVFLKKFIKEKFL-DKFEVFNN--EEYISIIQEEI 487 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-AGPVNICTLM 665 +A+ + ++ + L ++ E V+I + Sbjct: 488 SALYKFSEVIDNLLQY-----NMGKTSWRNMFKILTSIVNAENYRLSPRKENAVDIVDVQ 542 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 R + + + DGVYP +P + + +R F+ +LI + Sbjct: 543 IARFVEKEYKFFVSAVDGVYPSFNVNPLILQTLSEPNKLKSFNEEVERRNFVLSLIFSSH 602 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 YISY PS+ E + +S Sbjct: 603 N-YISYPKA-TLSGDPVVPSIYAAEFGEIKEES--------------------------- 633 Query: 786 RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE--TVPLETLQRFWAH 843 D + ++ E + + + E + + + + Sbjct: 634 ----DERYILIDPEMIFSEEDKRIYEAYFGENKLILNEKFKSDAEIKRLSHSRISDYVSC 689 Query: 844 PVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRA 903 P+ +F+ + + ++D L Y + N ++ E + Sbjct: 690 PLYYYFKHVAGIRYYSQDKSNLYKGILYHRVLKNYFEKEISFNKEKIKNYVEEAYDEIYK 749 Query: 904 AGDLPYGAFGEIFWETQCQEMQQLADRVIACR 935 Y EI E Q++++ + + + Sbjct: 750 EEFDRYKIPREINIEEFTQKLEEFIEGLFSES 781 >UniRef50_UPI0001789963 recombination helicase AddA n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789963 Length = 1373 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 55/500 (11%), Positives = 135/500 (27%), Gaps = 74/500 (14%) Query: 368 DPLDSSITF----HVCHSPQREVEVLHDRLLA--------MLEEDPTLT------PRDII 409 + + + Q E + ++ ++ D L D++ Sbjct: 560 ASEEDGVQLEAEALEMETAQLEARAIARKIREMTGESGKPLMVYDKGLKTMRPAGYGDMV 619 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 +++ ++P I +P + +E +SLL + D+ Sbjct: 620 ILLRSAMVWAPLII----EELRLEGIPAFGEQNKGYFQATEVEIILSLLQVIDNPRQDIP 675 Query: 470 VLALLDVPVLAARFDITEEGL------------RYLRQWVNESGIRWGIDDDNVRELELP 517 + ++L P+L ++EE + L+ V+ S +D Sbjct: 676 LASVLRSPIL----GLSEEEMAQVRLCAKGTYYDALKAAVSLSVAPPVMDPARPMGFVDG 731 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD-ESSGLIAELVGHLASLLMQLNIWRR 576 GL G+ + + + L + + + AEL L + +L WR+ Sbjct: 732 KWTPGAGLEGLAEAAAGHELVAGSHLSDAPLTAEGHAIEISAELGAKLGLFMDRLQRWRQ 791 Query: 577 GLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 Q L + + + + + + Sbjct: 792 EARQ-GSLSDLIWGIYSETGYLDWVGGLPGGRQRQGNLTALYDRAVQYEQDTASRGLFRF 850 Query: 635 SLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L +R V + T+ + + F VV + G++ + +Q Sbjct: 851 LTFISRLRERGGDLGTAGGTESQGNAVRLMTIHKSKGLEFPVVFVAGLS-KNFNQQDLNA 909 Query: 693 GFDLMSQK-----------------------PKRGDRSRRDDDRYLFLEALISAQQKLYI 729 F + + +R ++ + AL ++K+ + Sbjct: 910 PFLMHKELGFGPKFVDEGMRVSYPTLPNLAIRRRSQLELLAEEMRVLYVALTRPKEKMIL 969 Query: 730 SYIGRSIQDNSERFPSVLVQE--LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 + + + S Q + + + L + A ++ Sbjct: 970 VGTVKDL----PKKVSAWAQADFNPELLLPDYVLARGRSYLDWIGPAVIRHPSASPLRGQ 1025 Query: 788 PFDPQNYQPGERQSYAREWL 807 P+ + +W+ Sbjct: 1026 AGLPEETSSRALAADRSQWI 1045 >UniRef50_Q04GY7 ATP-dependent helicase/nuclease subunit A n=1 Tax=Oenococcus oeni PSU-1 RepID=ADDA_OENOB Length = 1186 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 66/589 (11%), Positives = 170/589 (28%), Gaps = 112/589 (19%) Query: 379 CHSPQREVEVLHDRLLAMLEEDPTLT----------PRDIIVMVADIDSYSPFIQAVFGS 428 +S Q ++E++ ++ A++ + RDI ++ + IQ +F Sbjct: 522 FNSRQAQIEIIAAKIQALVGQSEIYDRQSGKMRPLVYRDITILERSHS-WENDIQTIF-- 578 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 ++P ++ + +S L + D+ ++A+L P+ + + E Sbjct: 579 --KKYHIPINVAAGN-FLQEFEVSIVLSFLKIIDNPHQDIPLVAVLRSPI----YGLDEN 631 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L +R + ++ S L Sbjct: 632 QLAEIR------------------------------------------TADMKHDYFSAL 649 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN--AFFLPDAETE 606 +G +L +A+ L+QL +R +A + + + + + N + Sbjct: 650 QAYAKTGQDLDLQKKMAAFLVQLENYRE-IAADNQIVDLIWQIYNDTNWPEYVAGMVGGS 708 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ-ERISQRFLAGPVNICTLM 665 + + + ++L ++ + V++ T+ Sbjct: 709 QRQANL-HALYQYAQQLSDNHFVGLFSFIRYVEQLMDSVEDFAQAPVDMGQEAVSVMTIH 767 Query: 666 PMRSIPFKVVCLLGMN----------------------DGVYPRQLAPLGFDLMSQKPKR 703 + + F +V LL ++ D V+P + ++ Sbjct: 768 AAKGLEFPIVFLLNLDKQIDNRDSNGAMVVDFDNGIGIDFVHPTSQVKIPTIQKIAVAEK 827 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD---NSERFPSV------LVQELID- 753 ++ L AL A+Q+LY+ + + D N S+ + Sbjct: 828 IKEKNWAEEMRLLYVALTRAEQRLYLVGSSKRMSDLIHNWGTPVSIGKKVIAFQDRMRAK 887 Query: 754 --------YIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 + S Y+ D+ + + +P +N ++ Sbjct: 888 SYQSWIGMSLANSGYIKLDKVEGNYSKKDLTFKIESYNAQTIPKIVENKAKIKQNEQEET 947 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF-----QMRLQVNFRTE 860 + A + + L + L+R + P + Q+ E Sbjct: 948 GIDLARSKKILDYNYPYKIESELAAYHNVSELKRVFEDPDSLLMPEMNSDRQPQITELPE 1007 Query: 861 DSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPY 909 I + + + +L + + + ++ + + ++P Sbjct: 1008 PKFIGGNDQEQVSSTDKGTATHLILEKIDWKKEIDKDYLQQLIKENIPD 1056 >UniRef50_C6IZE1 Recombination helicase AddA n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZE1_9BACL Length = 1341 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 67/571 (11%), Positives = 142/571 (24%), Gaps = 79/571 (13%) Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITF 376 + D P+ LL + + + + G N ++ L ++ Sbjct: 519 YGEGFPPEGAEDYRPELLLIDRDNGSSGGSDSSERGDNEWTDGDGGDEEDEAALIEAVRL 578 Query: 377 HVCHSPQREVEVLHDRLLAMLEED--------------PTLTPRDIIVMVADIDSYSPFI 422 E + R+ ML E + RD+++++ +++P + Sbjct: 579 --------EARAIAARIRGMLGEGGEPLRIYDKQLQAMRPVAFRDMVILLRSTLTWAPAM 630 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 +P + +E +SLL + D+ + A+L P+ Sbjct: 631 I----EELRVEGIPAYGELSQGYFQASEVETMLSLLQVIDNPLQDIPLAAVLRSPL---- 682 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 +D +EE L +R + A + + Sbjct: 683 YDFSEEELADIRLASPSGRYYEAVLARAAAGNAESALSDSRGGDAGEASVYHPETGQIEP 742 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD-MLNAFFLP 601 L L + L QL WR + + + R+ + Sbjct: 743 SANDALAL------------KLQAFLRQLEAWRSMARVGQLGDLIREIYRETGYLEWVGG 790 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ--RLDQERISQRFLAGPV 659 + ++ + + L + V Sbjct: 791 LPGGTQRQSNLQALLDRARQYEVSSSAPGLFRFLRYVTRLRENGGDLGAPGDAGEQGDGV 850 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK------------------- 700 I T+ + + F VV + G++ + RQ F + + Sbjct: 851 RIMTIHKSKGLEFPVVFVAGLS-KQFNRQDLNAPFLMHKELGFGPKYVDANTRVSYPTLP 909 Query: 701 ----PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS-----IQDNSERFPSVLVQEL 751 +R ++ + AL + KL + ++ S Q+L Sbjct: 910 NLAIRRRAQMELLAEEMRVLYVALTRPKDKLVLVSSVKNLTKSVEAWGGALEASE--QQL 967 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 DY+ D + L P S +A Sbjct: 968 PDYLLARGRCYLDW-IGPALIRHPSARELRQFAGLPEVGPAVLAD--SPSDWHIAFLSAR 1024 Query: 812 QAGKAHSEFVQPLPFTLPETVPLETLQRFWA 842 AG+ + V ++ + Sbjct: 1025 SAGQNGGAETEAAATAEATAVDTAQIKALLS 1055 >UniRef50_B0RA36 Putative helicase n=1 Tax=Halobacterium salinarum R1 RepID=B0RA36_HALS3 Length = 1211 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 82/753 (10%), Positives = 180/753 (23%), Gaps = 146/753 (19%) Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 + L E L + I ++E + + +D L Sbjct: 501 ELFEYLLQPEGDTHEPYEAPPQE---LTTQRDRIEDIEGLTGSVEYLAVPDDADTAAELF 557 Query: 369 PLDSSITFHVC-HSPQREVEVLHDRLLAMLEEDPTLT-----------PRDIIVMVADID 416 D + H+ + E + L RL + ++ P + P D +++ Sbjct: 558 GDDHPVAEGALDHTIEAEAQALAARLTHLFDDPPQVQDPDTGVHREATPDDTAILLRRRT 617 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + A + +PY + P ++A +LL + + +L Sbjct: 618 HLDRY-----QRALEEYDIPYTVVGGVGFYDTPEVQALTNLLRVLGDPEDDVSLYGVLRS 672 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P+ F ++ L A Sbjct: 673 PL----FGFADDRLA-------------------------------------------PA 685 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE----WLPVCR 592 + A W ++ D+ LA L+ WR P E W + Sbjct: 686 VAEADSVWDALAETDDP---------QLADAFDLLSTWRTLSGCAAPSENGVLPWNRLLS 736 Query: 593 DMLNAF-FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD----Q 647 +++ +L + + + + L + ++ + + Sbjct: 737 RVIDDTGYLASVSADERGRQAIANVEKFRDQVRTWSENGVHTAAGLLHRIDRQAEIDPRE 796 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV----------------------- 684 A V I T+ + + F +V + + + Sbjct: 797 GEADIPGDAEGVRIMTIHSAKGLEFPIVTVPDLGSDLNFGRSVDDHGYVRLVDGTDDAPP 856 Query: 685 YPRQLAPLGFDLMSQK--------PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 P P D S + ++ R + + L A + L + Sbjct: 857 VPAVGGPDPGDAFSIEKTAVHEYADRQSRPQERAESKRLLYVACTRTRDHLLLCGTHDID 916 Query: 737 QDNSERFPSVLVQELIDYIG-QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ 795 D S EL + D A V + R D +Y Sbjct: 917 VDESGAI------ELGEPAAFDDADRWRDWVQPALLDGALVAEAIRDGQARGEMDEASYT 970 Query: 796 PGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQV 855 + P + + TL A Sbjct: 971 VRRPPRPVDWHTDDDAVDPALEISIPSPPSLAPAKRIAATTLVNAVAD------------ 1018 Query: 856 NFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEI 915 S E L + + ++ +D+ L R Sbjct: 1019 ASTDGHSYSQREESAGLSPTTFGTVVHRINELRPPRDEWSTLIHRLSRMTGEVPTEADVR 1078 Query: 916 FWETQCQEMQQLADRVI---ACRQPGQSMEIDLACNGVQITGWLPQV----QPDGLLRWR 968 + + D + ++ + + +I G++ ++ ++ ++ Sbjct: 1079 EAVDHAADAVEFVDHIESGSQLQEVHDEYSVVARIDESRIAGYIDRLLVMPDAFHIIDYK 1138 Query: 969 PSLLSV--AQGMQLW--LEHLVYCASGGNGESR 997 + LS + + + L Y + + Sbjct: 1139 TNDLSATTSDELADHYRPQMLAYALALLQHDQT 1171 >UniRef50_C5B538 Putative DNA helicase II n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B538_METEA Length = 707 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 59/412 (14%), Positives = 105/412 (25%), Gaps = 70/412 (16%) Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 S E + ++ + P I V+V P+ A Sbjct: 355 QVVAYDSEVAEAHGIAKAAKQLIAD--GTDPSKIAVLVRSAWVLKPY-----EEAFLRAK 407 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P+A+ R + ++ L L S + + P + + + + Sbjct: 408 VPFAVVGGRNALDREEAKDVVAFLRLATSPRDDLAFRRIANKPA----RGLGQAVVEAVV 463 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 V+ SG + +V Sbjct: 464 GHVSASGRTF------------------------------------HEACLAVAEAGHLE 487 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 E + LA L L R + L E + + + + Sbjct: 488 PRACEGLEILAEGLRLLYA-RAAGTKPDGLVEIAVTRTGYEEHLDRSEGDRKERRATV-- 544 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 L DA L+ + L + V I T+ + + F Sbjct: 545 -------AMLRRSARDAEDLTEFLETL-ALMSDLEFEGLREGARVKISTIHAAKGLEFDE 596 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR------RDDDRYLFLEALISAQQKLY 728 V L GV+P A + + GD D++R L AL A+ ++ Sbjct: 597 VFLPCWESGVFPNPRAVDE----GVRGRPGDPWNGPIGGGVDEERRLAHVALTRARHGVH 652 Query: 729 ISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 +SY I + PS L+ E + + A S Sbjct: 653 VSYATARIGFGAFLGAGPSALLAEADLELTAAPNGDLRPAKATRSSRMPAAR 704 >UniRef50_C5BZ31 UvrD/REP helicase n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BZ31_BEUC1 Length = 1136 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 100/724 (13%), Positives = 176/724 (24%), Gaps = 137/724 (18%) Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 D + E + L V+ D + P Sbjct: 425 PPLAARPDAGRGEVRSAFAAHRPEEAATIAAFLADRWRPGRGTA----AVLCRKRDLFEP 480 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +A +PY + P + + L + ++ LL P +A Sbjct: 481 V-----RAALEAAGVPYQVVGLAGLLRTPEVTDVRAALQAAYDPSRGDALMRLLTGPAVA 535 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL-GYAMES 539 + L L + +R DDD R + L ++ G+ S Sbjct: 536 ----LGPADLVALADAASARTVRRAGDDDAGRGGRREPAEAASIVEVLDQLPPPGWVSPS 591 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR--RGLAQERPLEEWLPVCRDMLNA 597 + E L L QL R L + + L+ Sbjct: 592 GRSL-------------SDEGRARLVGLAAQLRRIRGVAHLPMPDLVTATEEIL--GLDV 636 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL-LRDELAQRLDQERI----SQ 652 A + A G A+ L + ER Sbjct: 637 EVAVHEARAGAGGRARANLDELAAVAAEFDAGAALATLGAFLAWLDAAEEHERGLEAAHV 696 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ---------------------LAP 691 V + T+ + + + VV + G+ +G +P Sbjct: 697 EPDPAAVQVLTVHASKGLEWDVVVVAGLTEGDFPAVDGGANGVRSSAWLTGVAELPYPLR 756 Query: 692 LGFDLMSQKPKRG-----DRSRRDDDRY-------------LFLEALISAQQKLYISYIG 733 D + + G D ++ L A+ A+ L ++ Sbjct: 757 GDVDHLPELDVIGPVTHKDMDVAREEFRSAAGERELLEERRLAYVAMTRARHVLLLTGSW 816 Query: 734 RSIQDNSERFPSVLVQE-LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF--- 789 + + PS ++E + D P L+ +EA + P Sbjct: 817 WGTRK-TTLTPSRFLREVVADGSAVPLPPPWGGTLDAAPAEAAPAEPARAMWPAEPGGAT 875 Query: 790 -------------------DPQNYQPGERQSY-AREWLPAASQ-AGKAHSEFVQPLPFTL 828 D + +PG S AREWL A + + + LP Sbjct: 876 AQALRDAASGVRSWLAAGSDRLDLEPGAEPSARAREWLWQARALLDEREAAAGEALPADP 935 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 P + + + P AF + R R P+ R + Sbjct: 936 PGHLSASAVVQLARDP-EAFARAR-----RRPVPAEPNP------NARRGTRFHAWVEQH 983 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC- 947 + A D F LA A +++ Sbjct: 984 FAAAALLDVDDLDDEATDADLDVLRRAF----------LASDWAARTPIAVEADVETPLR 1033 Query: 948 NGVQITGWLPQVQPDGL-------LRWRPS------LLSVAQGMQLWLEHLVYCASGGNG 994 +G + + V P + W+ A+ +QL L L + G Sbjct: 1034 DGTLVRCRIDAVFPGRRSGQEVHVVDWKTGTPAADRSAREAREVQLALYRLAWSRLHGVP 1093 Query: 995 ESRL 998 R+ Sbjct: 1094 VERI 1097 >UniRef50_B9AD93 Putative uncharacterized protein n=2 Tax=Methanobrevibacter smithii RepID=B9AD93_METSM Length = 994 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 65/721 (9%), Positives = 178/721 (24%), Gaps = 150/721 (20%) Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 S+ RDY + +++ + + ++I+ + E Sbjct: 280 SFRGSFRDYFEEFYNKYNAELISLNYNYRST-------NNIIRTSEAFIKPQRKE--YSK 330 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 D + PQ E + + + + + + D+ ++ I S Sbjct: 331 KYLVGARNEDKASYILESLDPQEEAQKIFNLIKDLKDNGKIRQYSDVAILYRSIVSNKNI 390 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 + Y IS +++ ++L + ++ L+ L Sbjct: 391 --PFLIDEFKKNDISYHISGTEDLIESDEVKSILTLFYYIARKLDYSYGMSNLEKEWLNL 448 Query: 482 RFDITEEGLRYLR-------QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 R + + R +++ E + D + T + G Sbjct: 449 RAFCGIDFIPKFRKLSVETKRYLMELQENFENDVLKTEKEVYFEL---TGKKSRKNKFNG 505 Query: 535 YAMESAQGEWQSVLPYDE--SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW--LPV 590 + + ++ + E G +L R + ++ L V Sbjct: 506 VFTRNEDVLIEIFKRVNKPVVDLDLIEDAGD-REFFTELEKLRENVFSSDDEDKLTILEV 564 Query: 591 CRDML------NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 ++L + + + + E + + + + I D L + + Sbjct: 565 YYELLNLCGYFDDLVINNGDYELELENLSKISRTIFNYESIISAKDVRGLFFFLTNVIEG 624 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA-----------PLG 693 V + T+ + + F V + +++ +P Sbjct: 625 YGTSSSDV----DGVQLMTVHKAKGLEFPVTIVSSLSEYNFPLAPRDPMREKDNINKDDT 680 Query: 694 FDLMSQKPKRGDRSR-------RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 F ++ + D S ++ + A+ AQ L +S +G+ ++ Sbjct: 681 FYTPNKFLEYKDCSEADEVNLGLAEENRVIYVAMTRAQDILVLSVVGKMPEE-------- 732 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW 806 + + +Y ++ L + K +L Sbjct: 733 -ICRISNYFNKNLDLDNMSISSVGSKPEENKLNL-------------------------- 765 Query: 807 LPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 + + P R +L ++ Sbjct: 766 --------------------------SYSSFADYNNCPWRYNLLNKLHFKVSQKE----- 794 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC----- 921 I + L + + + + +G++ +I +T Sbjct: 795 -------VTKMGSIIHEAL---------DVINQEIKDSGEISKENMEKIAKDTYYLHGGT 838 Query: 922 -QEMQQLADRVIACRQP--------GQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLL 972 +E D + + + + + G + + + + Sbjct: 839 DEEFDDYMDSIFDYYNEIGFDITVVDSEVPFSIDRDNYRFNGAIDLIYKNQNGEYGILDY 898 Query: 973 S 973 Sbjct: 899 K 899 >UniRef50_B2GEY4 ATP-dependent helicase/nuclease subunit A n=3 Tax=Lactobacillus fermentum RepID=ADDA_LACF3 Length = 1337 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 75/559 (13%), Positives = 154/559 (27%), Gaps = 72/559 (12%) Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDP-LDSSITFHVCHSPQR-EVEVLHDRLLAMLEED 400 + + + A + F K +P + +I EV ++ R+ +L ++ Sbjct: 522 ADRDQASPATPELLLFDGGVKKTTANPTGEDAIVVRQPEDKVASEVWLIGQRIRELLAKE 581 Query: 401 ----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 +TP DI ++ + I +V A LP + Sbjct: 582 TILDPETKRVRPITPGDIAILSR-----AKRIHSVIAEQFAKLNLPVMVHGVENYFKATE 636 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLA---------------ARFDITEEGLRYLRQ 495 + +SLL + D+ + + A+L P++ R TE L YL+ Sbjct: 637 IRVVMSLLKVIDNPYQDVPLAAVLRSPLIQVAPEVAAKFGLSQGENRIGFTEPELAYLKV 696 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 +G+ N LT L + + +E Sbjct: 697 NSTSKDF-FGVVQQNYYAWRDQEVEAVENHDALTEEELAERVAGDP---AGLATKEELGV 752 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF-FLPDAETEAAMTLIEQ 614 + LA L R +AQ RPL + + ++ Sbjct: 753 NCGLIYLKLARFFE-LRDHLRRVAQRRPLVDLIWTIYQATGYLDYVGGMSGGPQRQANLH 811 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE-RISQRFLAGPVNICTLMPMRSIPFK 673 + + + +++ ++ D + +N+ T+ + + F Sbjct: 812 ALYERASGYEESGFKGLYQFIHFIEQMQKKNDDLGEATTALAGDAINVMTIHKSKGLQFP 871 Query: 674 VVCLL----GMNDGVYPRQLAPL--------------------GFDLMSQKPKRGDRSRR 709 +V L+ P + P + ++ R R Sbjct: 872 IVFLVETTHQFQADRDPVTIEPQAGLGFTYVDSTANETMRVKHPLVQQAALKEKKKRQDR 931 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSER--------FPSVLVQELIDYIGQSHYL 761 ++ L AL A+Q+L+I+ + + S L+ GQS Sbjct: 932 AEEMRLLYVALTRAEQRLFITGYVKDADLTKKMDKWNRAFDSASPLLTTTTRLKGQSMLD 991 Query: 762 PGDEALNCDESEARVKAHLTCLH-TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF 820 L + ++ + YQ + + + ++ Sbjct: 992 WIMMTLVRTANFPTLREGVEAAATPLRGLTKAAYQIKLQNADQVQAALNTPLDLHPNATA 1051 Query: 821 VQPLPFTLPETVPLETLQR 839 Q P L+R Sbjct: 1052 EQATPAAATSRQFKADLER 1070 >UniRef50_A4XB81 UvrD/REP helicase n=4 Tax=Micromonosporaceae RepID=A4XB81_SALTO Length = 1144 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 112/786 (14%), Positives = 198/786 (25%), Gaps = 111/786 (14%) Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 L + +A + + + S E L L A D Sbjct: 350 LLAAHARLARRLRGPATHRRTRALPAAAAGAAEVRTFRSAASEAAWLAHALRAAHLLD-G 408 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD-RRARQSHPVLEAFISLLS-- 459 + ++ V+V P ++ A +P + P + + LL Sbjct: 409 VPWSEMAVLVRSTGRALPSLR----RALHAAGVPTVVHGEDLPLHLQPAVAPLLLLLRCA 464 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 L R E +ALL P+ A + LR +G R + V L PA Sbjct: 465 LAPDRLDEEAAVALLHSPLGGADPLAERRLRQGLRVMALAAGDRRPSGELIVEALRDPAE 524 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 G+ R A Q+V + A G A + Sbjct: 525 -----LAGIDRRWAEPA--------QTVAGLLAVTRETAARPGATAE-----EVLWAVWR 566 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG-LGAQYGDAVPLSLLR 638 E W A + ++ A++ A++ D +P + + Sbjct: 567 VSGLAELWSAALARTPAAAGEGEVARRRRAEAADRDLDAVMVLFDAAARFTDRLPGARVE 626 Query: 639 DELAQRL-----DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L L V + T + + + +V + G+ +GV+P Sbjct: 627 VFLDHVLGQDLPADTLAPTADRGDAVRLLTAHAAKGLEWDLVAVAGVQEGVWPDLRLRGS 686 Query: 694 FDLMSQK------PKRGDRSR----------RDDDRYLFLEALISAQQKLYISYIGRSIQ 737 + G+ R D++R LF A+ A+++L +S + + Sbjct: 687 LLGSERLVDVLAGRSAGEGRRVSVVGQTSALLDEERRLFHVAVTRARRRLMVSAVASAAV 746 Query: 738 DNSER--FPSVLVQEL------------------------------IDYIGQSHYLPGDE 765 + PS + EL S Sbjct: 747 GGDDHDEQPSRFLHELGVADPPPGGGGGPDGDARPGEGAGSDGDAGPGEDAGSDDARTGA 806 Query: 766 ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL- 824 A A L DP R + A AA AH + L Sbjct: 807 LPLSRPPRALTLASLVAELRTAVTDPSAPVLRRRAAAAELARLAAEGVAGAHPDDWWGLR 866 Query: 825 ---------PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 P V ++ +R + P + + L Sbjct: 867 PLSDERPLVADGEPVRVTPSGMESALRCSLRWLLERHGG--------GAPASAAQGVGNL 918 Query: 876 SRYQINQQLLNALVEQDDAERLFRRFRA---AGDLPYGAFGEIFWETQCQEMQQLADRVI 932 + + + + RF A A G + ++ LA Sbjct: 919 VHAAAMLAENASSDRRALLDYVAARFDAIELAARWMVGPEQARAEAMVDKLLRWLATNPR 978 Query: 933 ACRQPGQSMEIDLACNG--VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCAS 990 + L + V + G + +++ D R L + + Sbjct: 979 RLLAIEHEFAVRLDDSRHPVDLVGRVDRLEVDSDGRLVVVDLKTGKSTAVT-----AADL 1033 Query: 991 GGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVL---PESGGAWLK 1047 + + + F E L QL G +E P +G A Sbjct: 1034 TEHPQLGAYQAAVEAGAFAEFGTESGGASLVQLGTGAKEAREQAQPPAGEGPAAGWATAL 1093 Query: 1048 TCYDAQ 1053 A+ Sbjct: 1094 VRRTAE 1099 >UniRef50_C0ZGU0 Putative ATP-dependent DNA helicase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZGU0_BREBN Length = 805 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 57/505 (11%), Positives = 139/505 (27%), Gaps = 85/505 (16%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 DP L + R ++ + E L +G+ + +G G D Sbjct: 378 DPGLLRRYQERLTYVMVDEFQDINRIQYETVKLLAAPQNNLCVIGDDDQSIYGFRGSDPQ 437 Query: 312 YLL---SDLESSQELDAFVDVTPDNLLHNI-QSDILELENRAVAGVNIEEFSRSDNKRPL 367 Y+L D + V+ + + ++ S I R D Sbjct: 438 YILGFTKDFPQASTFTLEVNYRSHSSIVSLGYSLIGHNRERWAKECQSFHREEGDTY--- 494 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + + + D ++ + + ++ +S P ++ Sbjct: 495 --------LFEPEDEEEQASRIVDEIIHR--REQGAILGECAILYRTNESARPILER--- 541 Query: 428 SAPADRYLPYAIS-DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 ++ +P+ + + + + ++ L L + ++ + +L I+ Sbjct: 542 --LSEAGIPFHYTQEEESFYQRQTVRWTLNYLRLALNPDDTDALKEILSTLY------IS 593 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 E LR +++ I + L Q + +L + Sbjct: 594 AEMWNALR---SQAIIEDKPILHVLPHLTQLKPYQRKHMQQINEILTACKDVPPAQALEL 650 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 + G L L + R E W + +L Sbjct: 651 IYED-----------GKLRDYLKKRAKDREDGR-----ERWSDELQQIL--------AAS 686 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 I D++ ++ + R + V++ ++ Sbjct: 687 KRHATISDFL-------------------AYIDQMTRQEKEWRTMRPLPDEAVHVLSIHR 727 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + + V L + +G P + + ++G +++R L A+ A+ Sbjct: 728 AKGLEYDHVFLPDLVEGALPHEYTLD-------ELRKGGSGALEEERRLLYVAITRARHS 780 Query: 727 LYISYIGRSIQDNSERFPSVLVQEL 751 L I + + S + E+ Sbjct: 781 LCIGIP--RERFGRKTRTSRFIAEM 803 >UniRef50_B0NBE0 Putative uncharacterized protein n=9 Tax=Clostridiales RepID=B0NBE0_EUBSP Length = 615 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 65/510 (12%), Positives = 141/510 (27%), Gaps = 90/510 (17%) Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSE-NAGQLFNSDGEQDVGNPLLAS 302 CR + +K L K + R ++ + + D VG+ + Sbjct: 190 CRDLF--LKRRDILEKWQQKFRYILVDEFQDVNQAQYDVIRMLAAPEDNLFIVGDDDQSI 247 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 +G G ++ LL+ + N A+ + + Sbjct: 248 YGFRGAKPGIMMEFAND-------YPNARQILLNVNYRSSAHIVNGALRVIGHNKTRFDK 300 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 +I P E + +R+ + + + V+ Sbjct: 301 EIAAKQKAGETIHVQEVKDPVEESRYVLERIQEY--QSQGIPYSQMAVLYRT-----SLD 353 Query: 423 QAVFGSAPADRYLPYAISDR-RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 + + +P+ + +R H + S L + L + + P Sbjct: 354 ARMLSETLMEYQVPFTMKERLNNIYEHFIGTDISSYFHLAKGEQERKYFLQIANRP---- 409 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 I + + L + + + ++ M + Sbjct: 410 NRYIGRDSM--------------SESKVTYETLRNFYCDKAWMQNRIDQLEWDMKMICNK 455 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 + ++ +S G L + ++R+ Q L L + + Sbjct: 456 TPYAAIQYIRKSMGYD--------EYLREYAVYRQM--QPEELMAVLEEIQQNSKEY--- 502 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 Q ++ L +Q R S+ V + Sbjct: 503 ------------QSIDEWFEHV-----------ERYKEMLT---EQARKSRSQGGEGVAL 536 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 T+ ++ + + V ++ N+G P + A D +++R LF A+ Sbjct: 537 MTMHGVKGLEYDTVFIIQGNEGSIPYKKAKSPDD-------------IEEERRLFYVAMT 583 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 A++KL ISY+ ++ PS V EL Sbjct: 584 RAKRKLIISYVK--EKNGKSLSPSRFVNEL 611 >UniRef50_C2UN36 ATP-dependent DNA helicase, UvrD/REP n=3 Tax=Bacillus cereus RepID=C2UN36_BACCE Length = 719 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 51/451 (11%), Positives = 133/451 (29%), Gaps = 75/451 (16%) Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 + ++ ++ + V+ + + + + +++ + P Sbjct: 332 ILDFPNEYPGAKVIKLEVNYRSNPYIVGLGNAVIKNNKVQFKKELRAFKADGPKPIYSSP 391 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 DS E + + + ++ T +DI V+ ++ Sbjct: 392 ADS----------DEEAINIVQSIKSAIKS-ETRQFKDIAVLYRTHAVSRAIVEQ----- 435 Query: 430 PADRYLPY-AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT-- 486 +PY ++ + + I L L + E + + +V ++ I+ Sbjct: 436 LVLNDIPYIQYGNKDTFYENTYVRPIIGFLRLALNPTDEEAIKEICNVLYISKEKAISHI 495 Query: 487 --EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 L Y+ V + + G GL R+ A+E + + Sbjct: 496 NRASALDYIDGKVKPLLYYLTSIPELKKYQLQFIIGVIKNLKGLARLNPDLAVEEIRHGY 555 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 Y +++ + L + +++L+ Sbjct: 556 IGYEKYLQNN-------------------------KRGSLTIHQELVKEVLDELTASSK- 589 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 + D V L +++++ + Q V + T+ Sbjct: 590 -------------KFKDIASFLNFIDKVILR------NKQMEELQKQQNP--DAVALHTI 628 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLA----PLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + + F V +G+++GV P + A + + + +++R L + Sbjct: 629 HSSKGLEFPTVFFIGVSEGVLPHKSALEVMEDRITNKKEMLMK-LQESLEEERRLAYVGI 687 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 A+ +L+IS + N S ++E+ Sbjct: 688 TRAESELFISSPK--VVRNQSCEISRFIKEV 716 >UniRef50_A9KRX8 UvrD/REP helicase n=10 Tax=Bacteria RepID=A9KRX8_CLOPH Length = 666 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 58/460 (12%), Positives = 124/460 (26%), Gaps = 102/460 (22%) Query: 312 YLLSDLESSQELDAFVDVTPDNLLHN------IQSDILELENR--------AVAGVNIEE 357 L + Q + F P+ +L ++ +L R A+ V + Sbjct: 233 NLFIVGDDDQSIYRFRGAKPEIMLSFEEEYKGVKKVVLNKNYRSKGNIITGALKVVGNNK 292 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + + + I + + + + + + I V+ Sbjct: 293 KRFPKEIQSIHEPGNEINVKSFSDLPAQNQAILEEIDHY--RKMGMRYSQIAVLYRTNTQ 350 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRA-RQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + + +P+ + D H + + I + L L +++ Sbjct: 351 PGSLVTK-----LMEYNIPFKMRDSLPNIYEHWIAKDLICYIKLSMGIRERGLFLQVMNR 405 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P R + A Sbjct: 406 P---------------------------------------------------KRYISREA 414 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--M 594 +E + ++ + + E + L L + + R Sbjct: 415 LEQTDVDLNTIREFYMEKPYVVERIDKLVYDLTLIRR--------TNPYAAINYIRRAVG 466 Query: 595 LNAFFLPDAETEA-AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 + + A + + + E Y DE L ++ + Q Sbjct: 467 YDDYLKEYAAFRRIKVEELYDILSELQEESRE--YKTHEEWLNHIDEYKDGLKEQALKQN 524 Query: 654 FLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 V + T + + F VV L+ N+G+ P + A + D +++ Sbjct: 525 QKDVDGVILTTFHASKGLEFDVVILMDANEGITPHKKAVVPED-------------MEEE 571 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 R +F A+ A+ L+I Y+ + N E PS V EL+ Sbjct: 572 RRMFYVAMTRAKSFLHIFYVKQR--YNKELSPSRFVGELL 609 >UniRef50_B2IGN3 Double-strand break repair protein AddB n=2 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IGN3_BEII9 Length = 1076 Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 106/889 (11%), Positives = 228/889 (25%), Gaps = 138/889 (15%) Query: 216 ISALPPVYLQ--ALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRE 273 I + L L + I + F N W +I R+ + Sbjct: 187 IEDITWSQLDPLVLPEFDAYWRITMNFLNIAIESWPEICSEQGWIDAAKRRVLLLAREAR 246 Query: 274 LPLFRDSENAGQLFNSDGEQDVGNPLLASWGK--LGRDYIYLLSDLESSQELDAFVDVTP 331 +E S G + LLAS + G +L L+ + AF + Sbjct: 247 KLDEGTAEGPVIALGSPGFNRTTSALLASIARAPQGA---VILPGLDQDLDEAAFKMIDH 303 Query: 332 DNL-------------LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS------ 372 ++ L + D++ L + + S+ RP D D Sbjct: 304 ESFGHPQAVYVRLLPILGVTRQDVMPLGEMSPMLIR-RHGFLSEALRPADTTDEWITYQV 362 Query: 373 ------------SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 IT ++E L L +LE ++ D + Sbjct: 363 RNVSTDLADALSGITMIEAQDERQEALALAIALREILETPGKTA----ALVTPDRE---- 414 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 + + + S + P L+ S ++D+ ALL ++ Sbjct: 415 -LARRVRTELLRWNIEIDDSGGDPLNTSPRGLLARLALACITSGMDAKDLAALLANEQVS 473 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 + ++ + I +R + P YA + Sbjct: 474 --LGLGR---DRIKALAPQFEIAILRSAPVMRFFDQPDI---ALTMARDAAFDTYAHPAK 525 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 E +A+++ L +L L R R + V ++ Sbjct: 526 ARIE------AEDWDGLAQILERLRDVLSPLRALRGTWPLARWIAAHRMVLDGLVRDADQ 579 Query: 601 PDAETEA----AMTLIEQQWQAIIAEGLGAQYGDAV-PLSLLRDELAQRLDQERISQRFL 655 D + + +A+ E G + ++ + R+ Sbjct: 580 TDGQDQQDRTLEAGEDAAALEALFDELSGTTPQGLLFDVASYAAFFTDISGEVRLRGPRR 639 Query: 656 AG-PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 A + I L+ R + V+ L G+++ ++P F + G +R Sbjct: 640 AHPRLKILGLIEARLMQADVMLLGGLDETIWPPAAQMDAFLNRPMRAALGLTPP---ERR 696 Query: 715 L------FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 L F +A+ + + +S + + S L+Q + G ++ Sbjct: 697 LGQATHDFTQAM--GAESVILSRAKKRG--GTPTVASRLIQRMAALAGDVWQSCLEQGER 752 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 + +P Sbjct: 753 FLAFAEALDRTPINP------------------------ADHRPQRPLGRPNPKPPVGLR 788 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 P + + ++ P F + L + D +G++ + + ++ Sbjct: 789 PTHLSVTQIETLRRDPYAIFAEKILGLKALDALGAGADRRD---DGMAVHAVLERCGKLH 845 Query: 889 VEQDDAERLFRRFRAA------GDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME 942 + + + L F W + + R +E Sbjct: 846 PTGPLPADMDEQLLSWLREALAARLDDPDFSAFQWPRLQKAIDVYLAFEAERRDNLVRIE 905 Query: 943 ID----LACN-----GVQITGWLPQVQPDGL-----LRWRPSLLSVAQGMQLWLEHLVYC 988 ++ L + +T +++ + ++ ++ ++ Sbjct: 906 VETFGRLPIDLADGSRFLLTARADRLEFHRDQSLVLVDYKTGAPPSSKEIR--------- 956 Query: 989 ASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLV 1037 +G + L F A QA L + G G P+ Sbjct: 957 -TGLAPQLTLEAAMAKRGAFGSDAIAQAYGGLYLKLGGADGGQVRPVEF 1004 >UniRef50_C7XXL2 Recombination helicase AddA n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XXL2_9LACO Length = 1281 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 54/434 (12%), Positives = 122/434 (28%), Gaps = 91/434 (20%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR-EVEVLHDRLLAMLEE------- 399 V + I EV ++ R+ ML+ Sbjct: 523 PTELMVYDANADNETIIDKEENQQRYIKLPEGSDKYAGEVWMVAMRIRQMLDNQERIYDP 582 Query: 400 ----DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 + + P DI+++ + ++ +P + D + + I Sbjct: 583 ELGHERPIQPADIVILERTKSPNNRIVEQ-----FGQLNIPVVVQDVQNYFKATEVRTMI 637 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 SLL + D+ + ++A+L P++ +TE + YLR R+G + V+ Sbjct: 638 SLLKVIDNPYQDIPLVAVLRSPIV----GLTEPEMAYLR-----INHRYGNFYEAVQFFT 688 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 Q + + L L+ L +L ++ Sbjct: 689 QQDPEQWSATTDVDLEKLHV---------------------------KLSRFLDRLTKFK 721 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 Q+ ++ + + ++ + + + Sbjct: 722 VTAQQQSLVDLIWQIYQTTGYLDYVGGIPGGSQRQANLHALYERAHTYEQSSFKGLYQFI 781 Query: 636 LLRDELAQRLDQE-RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL-- 692 + + +R + VN+ T+ + + F +V ++ MN + + Sbjct: 782 HFIERMQKRDEDLGEAPVELATDAVNVMTIHGSKGLQFPIVFVIDMNH-HFNSRDVAGNL 840 Query: 693 --------GFDLMSQKPKRGD--------------------------RSRRDDDRYLFLE 718 G + P +GD R+ R ++ L Sbjct: 841 VIEPHLGIGIRYLGDAPMKGDDQSLTAENIKVTYDLPQRTVVADAITRANRAEEMRLLYV 900 Query: 719 ALISAQQKLYISYI 732 AL A+Q+L ++ Sbjct: 901 ALTRAEQRLILTGS 914 >UniRef50_B2KE90 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KE90_ELUMP Length = 1074 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 73/640 (11%), Positives = 167/640 (26%), Gaps = 129/640 (20%) Query: 382 PQREVEVLHDRLLA-----MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 + E + L L +DI V++ +++ +F A + Sbjct: 507 RHNQAEFTAKWIAENAGKLKLSNGSVLQYKDIAVLMRTSNAF-----NIFTEALKRYGVK 561 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 Y + + + + + ++LLSL D+ + + +L P ++ + + + Sbjct: 562 YTVEEDKNFYTAQEITDILNLLSLLDNPYDKNALAGVLRSPF----GGFNDDEIYQIFK- 616 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 ++ + G Sbjct: 617 ---------------------------------------------QKFTDISAKKLPKGF 631 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 E +G L L + ++ +E+ L + F ++ Sbjct: 632 --ERLGGFYKTLNTLKGFVGRISTGALVEKILS------STMFAELSQLAYNGEQTISNL 683 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI-SQRFLAG----PVNICTLMPMRSIP 671 Q A G Q +A L Q R + LA V++ T+ + + Sbjct: 684 QKFAALAAGDQNENANSLGQFLANSKDLARQARGEGESPLADEFLSAVSVMTIHKSKGLE 743 Query: 672 FKVVCLLGM--NDGVYPRQLAPLGF-DLMSQKPKRGDRSRRD------------DDRYLF 716 F VV L M + V + + F D+ + + ++ + Sbjct: 744 FPVVFLADMFRQESVKQNKYSYSWFYDMHGLRAGPYADANLAFLEVQQLWHSKSEEARIL 803 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 AL A++KL+I + + P+ L + + E N + Sbjct: 804 YVALTRAKEKLFILGNNTETK----KTPAR---HLRNAGLWPELVTVKELPNDKLTHPLQ 856 Query: 777 KAHLTCLHTRMPFDPQNYQPGE--RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPL 834 + N+ P + A EW ++ + + + + F + Sbjct: 857 LEYFPYAEPDQFIYKINFTPEDGGVLKNAGEWFNRWAKRSEIYEKIKEEALF-----ISP 911 Query: 835 ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN--ALVEQD 892 +L + D + ++L Sbjct: 912 SSLN-----------------KHEAVFAGSSD------NAALLGTLCHKMLENYDFKTVI 948 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQI 952 E+ + E + ++ ++ + R + M G I Sbjct: 949 TPEQTAASAASLQIEDNDIIKEAAEIINNFTVSEVCKKLASMRVLAREMPFTYFEEGKII 1008 Query: 953 TGWLPQV--QPDGLLRWRPSLLSVAQGMQLWLEHLVYCAS 990 +G + + Q + + L+ Y + Sbjct: 1009 SGTVDVIVEQEGEIFVLDYKTDKTPDPSKYALQLGAYKRA 1048 >UniRef50_B2I385 Superfamily I DNA and RNA helicase n=17 Tax=Acinetobacter RepID=B2I385_ACIBC Length = 659 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 66/537 (12%), Positives = 144/537 (26%), Gaps = 104/537 (19%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIY 312 A + + ++ + L VG+ + +G G D+ Sbjct: 204 SEALTNWVAGFCQALLVDEMQDTNPLQWALLQPLIGKVKLFCVGDDAQSIYGFRGADF-- 261 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNI------QSDILELENRAVAGVNIEEFSRSDNKRP 366 + + +F + PD ++H + +IL+L N +A I+ + R Sbjct: 262 --------ENIHSFKERIPDAVIHTLDLNYRSTQEILDLSNWLLAHSPIDYQKQLQAHRG 313 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 H+ + E + L+ ++ D +V+V + Sbjct: 314 KGQKP---QLHLFGNEFEEANWIAQDLIERHQQ--GANWYDHMVLVRS-----GYSARYL 363 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 A +PY ++ +SLL + + + L I Sbjct: 364 EGAFIAAEIPYRFIGGVKLLESAHVKDVLSLLRIVSNPQDDLAWMRFLT-----LWDGIG 418 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + G L Q + R + Sbjct: 419 DVGASKLAQ------------------------ELMSISEVEERCERLERHGKVPLQAIL 454 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 +L + E LA L+ L Q ++W RD + Sbjct: 455 ILKQLDVLQQHVEASIGLA-----LDALSEQLEQNYKTKDWSRRARDF---------DLV 500 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + + E + + + +S + L V + T+ Sbjct: 501 KQLARKHASLGEFLEEYVL----EPISISEIEKAGDDDL-------------VTLITIHS 543 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + KV + ++ YP A FD +++R + AL A+ + Sbjct: 544 AKGAEQKVCYVPHVSPNQYPYARAQGDFD------------EVEEERRVLYVALTRAENE 591 Query: 727 LYI------SYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 L + ++ + + + S + +L ++ Q+ + + Sbjct: 592 LILTKQNLNTWSQDTYDEQGRKIESYFLNDLPAHLVQAKIHRQVPQPFAKKQWNTSR 648 >UniRef50_Q2S4M5 Probable ATP-dependent DNA helicase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S4M5_SALRD Length = 855 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 66/526 (12%), Positives = 139/526 (26%), Gaps = 79/526 (15%) Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 + + D F P +L A A + + R + Sbjct: 281 FREEYEADEYLIRDTFRSQAPHTVL-------------ANAVIAHNDHRREKHLNLTRGF 327 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 S H E + + + L+ TL +++V+V +P ++ VF Sbjct: 328 GGSTQVHAADGADAEATHVAGAIESQLDTGRTLP--EMVVLVRQYAQ-TPSLEQVF---- 380 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 DR LPY I ++ + L + A + + + Sbjct: 381 IDRDLPYRIVGNVPFYRRRPVQVLLRHL-------FWGTLEATVRTAGWFDHRRNAQRYV 433 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 ++ + E D L A+ + Sbjct: 434 DRFQKLMREPNRYVSTDLITR--------------------LCREAVGDETSITDLLAA- 472 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQE-RPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + + L + L + +WL D + + E Sbjct: 473 -SMGAMHDRTAERVERFLDTADQLVDRLDEPAHRTVDWLIKALD-YEDYLRRYSAFEELA 530 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + +++I ++ + + + + +R + A + I ++ + Sbjct: 531 DRRIRTARSLIDFAR-----GHPDVASVLRRIKE-ISVDRPDRGAQADVLEIRSIHRAKG 584 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR---------------SRRDDDRY 714 + VV + G NDG P + G +RR+++R Sbjct: 585 REWPVVFVPGCNDGTIPTSRDDSTMPPPDEDDSAGASDDSGSEDSDTDDAPAARREEERR 644 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 LF AL AQ++L++SY + PS + E + + + Sbjct: 645 LFYVALTRAQEQLHLSY-------DRTEPPSPFLAEADAEHRLALCDRVRPVFHRPADDW 697 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF 820 + Y + A+ G+ + Sbjct: 698 AAADVAWLCIGAGALRLRRYLTTWWDPTEAQRRALAAHLGREEALR 743 >UniRef50_Q0G5V1 Putative uncharacterized protein n=2 Tax=Aurantimonadaceae RepID=Q0G5V1_9RHIZ Length = 1049 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 101/829 (12%), Positives = 209/829 (25%), Gaps = 110/829 (13%) Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 AS G +L +D +L + + I + A E Sbjct: 279 ASPGHPQYGLKRILDG--------ILIDRDSVGVLESDKHLIARERFLSEALRPAETTEH 330 Query: 361 SDNKRPLDPLD--SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 + D +T P+ E + + L + ++ D + Sbjct: 331 WSKSGSANGEDALDGLTLIEATEPREEALAIACAMRDALSDSKAT----CALITPDRNLA 386 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 + + S R +S ++LLS+ + +LALL P+ Sbjct: 387 RRVVIE-----LERFGIRANDSAGRPLKSTAPGTLVLTLLSVAFTPGDPIPLLALLKHPL 441 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 + R +T R + + +R ++ + +L + A Sbjct: 442 V--RLGMTSAEARRAARAIELIALRGSVEIADAAKLSEIVDRRL-LGSARPVDDEAAAEV 498 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP--LEEWLPVCRDMLN 596 + Q + P S EL A L E L ++ V ++L Sbjct: 499 TKQDRIRLSRPAQLVSKEDRELARRFAQAFEASISPLIALRGEATRELADYTAVLTEVLE 558 Query: 597 AFFLPDAETEAAMTLIE--QQWQAIIAEGLGAQYGD-AVPLSLLRDELAQRLDQERISQR 653 + + E + ++ + + P + L D + + + R Sbjct: 559 TLCRDENGYPRELYAEEPGHALKDFLSSLVASPRTGFDFPATELEDVVDALMASVTVRPR 618 Query: 654 FL-AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 + + + R L G+N+G +P F + D + + Sbjct: 619 GGLSARAFVWGTLEARLQSVDTAILGGLNEGTWPAGAKNGAFLSRMMRR---DIALDPPE 675 Query: 713 RYLFLEA----LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 R + L A + +++ ++ + QD + S +Q + Sbjct: 676 RRIGLAAHDFWMAMGARRVILTRSTK--QDGAPTIASRWLQRIAAL------------AG 721 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 + + + + LH A L +S+ A +P Sbjct: 722 PERTGDLKRRGIVYLH------------------AARRLEESSRTAIAARPEPKPPVEKR 763 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 P + ++ P LQ+ P R + +L+ Sbjct: 764 PRRYSVTEVETLIRDPYAIHATKILQLEPLDPLMRSPA-------AAERGSLYHAILSDF 816 Query: 889 VE-------QDDAERLFRRFRAA--GDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ 939 V+ ++L R + +W D Sbjct: 817 VQNGLDPMADAALDQLLEIARDRFDKEQLPAEIEAFWWPRMEAIASGYLDWERGRNADVA 876 Query: 940 SMEIDLACN------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYC----A 989 ++ + V++ G ++ + + Sbjct: 877 VRHAEIKGSITVTGIDVELVGKADRIDVMRDGSIEIIDFKTGTAPSVAQARSLLAPQMPL 936 Query: 990 SGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGA----- 1044 GG F R L + + E Y EG++ P ++ A Sbjct: 937 EGGMALRGGFEDVKDADRIHDLTYVRLREH-----EVYPEGLAKP---ATKTAEAVDPMD 988 Query: 1045 WLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRL 1093 ++F AY G+ G R Sbjct: 989 LSVKAITKFESLAAKFQKRETPFTSRFRPAYAGDFS----GTYDHLARA 1033 >UniRef50_C0FS43 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FS43_9FIRM Length = 1182 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 54/429 (12%), Positives = 121/429 (28%), Gaps = 58/429 (13%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR-EVEVLHDRLLAMLEEDP--- 401 E A + D D + + E +++ + + +++ P Sbjct: 518 EETAEEQTKQSIADFTPEILLADSNDELLEDTEFSDKKTLEAKIVAEEIRHLMKTQPVTD 577 Query: 402 -------TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 DI++++ + ++ + V +P S ++ Sbjct: 578 KATGELRAARYSDIVILLRSLSGWADSLVEV----LNGNGIPAHTVSSTGYFSTVEVQTV 633 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 +S+L L D+ + A+L P+ +T+E L LR D Sbjct: 634 LSMLRLLDNPRQDIPMAAVLRSPM----AGLTDEELAVLR----------LEDGSVPFHE 679 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 + + + + + +S + Q +++ I + Sbjct: 680 AVLELAEGLYEEDGQKEISDSEADSEADQKQGRNADEKTENHIEITAHRKLLKFYKKYKQ 739 Query: 575 RRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 R L + P+ E + + + + + A Y Sbjct: 740 LRQLVPDTPIHELIEIILRETGYGHYVAAMPAGNRRTANLNMLLEK-AAAYEKTSYKGLF 798 Query: 633 PLSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 DEL + E V I ++ + + F +V + GM + +Q Sbjct: 799 HFVRYIDELQKYDVDFGEADMVGENEDVVRIMSIHKSKGLEFPIVIVSGMG-KNFNKQDT 857 Query: 691 PL----------GFDLMSQKPK-------------RGDRSRRDDDRYLFLEALISAQQKL 727 G D M K + + D ++ + AL A++KL Sbjct: 858 RSKMVLHPELGIGLDYMDGKKRIKSPTIAKKAIAKQIDLENLGEELRVLYVALTRAKEKL 917 Query: 728 YISYIGRSI 736 ++ + Sbjct: 918 ILTGTLKDA 926 >UniRef50_C0GCZ6 ATP-dependent nuclease subunit B-like protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GCZ6_9FIRM Length = 1004 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 69/634 (10%), Positives = 164/634 (25%), Gaps = 83/634 (13%) Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 P +T + E+ + L + +E+ L D V+ Y P I Sbjct: 236 PQNSPQPPELTILRAYGQTNEIRQV---LRHLQQENIPL---DNAVVCHTSTKYIPLILT 289 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 + + +P ++ + L+ + R+ S + L+ + Sbjct: 290 ITA----SQNIPVTFAEGIPLGFTRPGRFTLQLIRWIEERYTSLILHQLMTSGDMRLT-- 343 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 + L + ++ I W + + + ++ Sbjct: 344 -SATTQARL---LRQANIGW---------------ERSRYIPCTESLHQSILQKATAATN 384 Query: 545 QSVLPYDESSGLIAELVGHLAS-LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL-PD 602 + PY + AE V L L + + + + Sbjct: 385 EGNDPYAQYLHQQAEHVSTLKQTLTQIFSRIPDATDGNVSFPKLCRGISQTTSTYARISS 444 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-AGPVNI 661 A+ I+ + +PL L Q LD + G ++I Sbjct: 445 PTDGLALAAIQDTLTE-----AAHAFSGTLPLREALRRLHQVLDTLHTAASPPKPGHLHI 499 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR-----DDDRYLF 716 L V ++G+ D +P L ++ + +Y Sbjct: 500 TGLNQAAFTHRPVTFMVGL-DANFPGSGLQDPVLLDQEREQIHPELSLLTHEPAKRQYRL 558 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQE---------------LIDYIGQSHYL 761 L S + ++ +SY + P+ ++ + L + + Sbjct: 559 ARYLSSRRGQIILSYPSYDTVEGRHTSPAAILLQAHRLQTNNPTADYSALQESLTTPAGF 618 Query: 762 PGDEALNCDESEARVK----AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH 817 E +L+ + + +++ + Sbjct: 619 LAPSPDQFTTLEEWWLTTTLKNLSAHNINTVTACYPHIASGLEAHQHRAGTDFTPYDGRV 678 Query: 818 SEFVQPLPF-TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS 876 + P + T+ + P F + L++ + P T L+ L+ Sbjct: 679 DPDLDRDPRISQTLTLSATQFENLANCPFGYFLRYVLRIQPPEDAEYDPGT---WLDPLT 735 Query: 877 RYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ 936 R + + + Q + P +T + L ++ Sbjct: 736 RGSLLHDIYCTYLRQTHNPDNPQ--------PPNK------QTLLSIAEDLINQTKQTLP 781 Query: 937 PGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPS 970 P M + + + G + + + +P+ Sbjct: 782 PPSDMVFEHEKEEL-LRGLEVFWRVEESAQTKPA 814 >UniRef50_D2EH37 Recombination helicase AddA n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EH37_PEDAC Length = 1238 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 42/385 (10%), Positives = 111/385 (28%), Gaps = 80/385 (20%) Query: 385 EVEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 +++++ R+ + + L DI ++ + ++ + Sbjct: 545 QLQMIAQRIKRLFADQTEVFDRDTQEMRPLKYSDIALLHSTGNNNLNIV-----DTFKKY 599 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P +S+ + + ++LL + D+ + + A+L P++ + E L +L Sbjct: 600 GIPIEVSNAQDYFQTTEVSIMMALLKIIDNPYQDIPLAAVLRSPIV----GLDENELAFL 655 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R ++G + + +Q+ D Sbjct: 656 R-ISKKNGHYF----------------------------------ESVLYFQNEFKIDYQ 680 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 + A L + L QL +R+ Q ++ + ++ ++ Sbjct: 681 NEFQANLKRKIDQFLAQLQHFRKLSQQCTLVDLLWEIYQETGYLDYVGGMPDGPQRQNNL 740 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERISQRFLAGPVNICTLMPMRSIPF 672 + + +++ ++ D V + T+ + + F Sbjct: 741 HALYDRAQSYEESSFKGLFQFVRFVEKMREKNKDLAENPVVTDTEAVKLMTIHSSKGLEF 800 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD-----------------------RSRR 709 +V L+ + G + + L R Sbjct: 801 PIVFLIDADHG-FNNSDTKGRYVLDRDAGMGITVKDFVHRLEVDTMQKNWIIDVRQRKML 859 Query: 710 DDDRYLFLEALISAQQKLYISYIGR 734 ++ + AL AQQKL ++ + Sbjct: 860 AEELRVLYVALTRAQQKLIVTGALK 884 >UniRef50_Q1WRS0 ATP-dependent helicase/nuclease subunit A n=3 Tax=Lactobacillus RepID=ADDA_LACS1 Length = 1248 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 49/389 (12%), Positives = 104/389 (26%), Gaps = 80/389 (20%) Query: 385 EVEVLHDRLLAMLEEDP-----------TLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 ++ + R+ ++E + RDI ++ + + Sbjct: 552 QIVMTAKRIKELVENGEKIYDKKQGTIRPIEYRDIAILAPTRKNNL-----ILTEEFKRL 606 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P + D + L+ +S L + D+ + ++A+L P++ + E L YL Sbjct: 607 GVPIFVPDAQNYFQTTELKIMMSFLQIIDNPYQDIPLVAVLRSPIV----GLKENELAYL 662 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R + + + +E A Q Sbjct: 663 R----------------------INDKTGDYFQAVESFYDNFEVEKASAFAQ-------- 692 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD-MLNAFFLPDAETEAAMTLI 612 L +A L QL +R Q + + + + Sbjct: 693 -----SLYEKIAIFLKQLTEFRNMAQQNELASLIWKIYEETGFLDYVGGMPGGLQRQANL 747 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERISQRFLAGPVNICTLMPMRSIP 671 AE + +++ + D + + V + T+ + + Sbjct: 748 -HALYERAAEYEEMSFKGLFQFVRFINKMQTKNKDLSEATTQVSDDAVTVMTIHGSKGLE 806 Query: 672 FKVVCLLGMND----GVY------------------PRQLAPLGFDLMSQKPKRGDRSRR 709 F VV LL G P + K+ + Sbjct: 807 FPVVFLLDATHKFNVGDLNKPYLLNADDGIGISYLDPDTRVKTDTLMKVIAGKQALKKLA 866 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQD 738 + L AL A+Q+L+I + + Sbjct: 867 AEQMRLLYVALTRAEQQLFIVGSYKDKNE 895 >UniRef50_A4ALD4 ATP-dependent DNA helicase n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4ALD4_9ACTN Length = 1033 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 92/854 (10%), Positives = 206/854 (24%), Gaps = 125/854 (14%) Query: 194 IETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKD 253 + L T L R G++ + L LG+ + D Sbjct: 156 VRRLRGFRTELRDLMMRCVEFGVTP------RDLAQLGERNDRPEWVAASAFISVYDAVK 209 Query: 254 PAYLAKLLTRQRRHSFEDRE----LPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD 309 +Y + + D + ++ + LL + G Sbjct: 210 ASYRDRHFDASELLAEAAALIAEGHYAAVDRLRLVIVDDAHELTEATISLLRALATRG-- 267 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE------------ 357 I ++ + +F P L + LE Sbjct: 268 -ITIIGFGDPDLTTGSFRGAQPGVLSRWAEQLELENCQTLFLSSVHRHSASLRSAVIDVT 326 Query: 358 -------FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV 410 + SSI +P EV + L ++ + V Sbjct: 327 QRVGVSGLIEQRKSMSVATEPSSIHSFQLSTPAEEVAFIARHLREKHVL-ESVPWSRMAV 385 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 +V +P S R ++ V+ + S S F + Sbjct: 386 IVRTGSL-----------------IP---SLARQLRTLEVVTSVSSARSAVRDEFSVNGL 425 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 + LL+ + L S G D ++R L+ Sbjct: 426 IVLLE-------LALERRTLDAASAVELLSSSVGGFDAVSLRRLKAALRH--------EA 470 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP- 589 + + Q Q++ + + + A++ L+ A +EE L Sbjct: 471 LGAEIYDSADQLIAQALAAPAGFTSIETRVSRQAAAVAKNLHETAAAGAAGDTIEELLWG 530 Query: 590 ------VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR-DELA 642 + E A ++ + + P ++ + L+ Sbjct: 531 AWQRSGLADRWFTQALGSGVVAEEANRHLDAVVALFSSAKRFVERRPDAPANVFLTEWLS 590 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 + ++ ++ R + V + T + F VV + G+ + V+P P+ Sbjct: 591 ADVAEDTLAARSIVDSVTVGTPASVIGQEFDVVVVAGVQENVWPNLRVRGSLLGAHDLPR 650 Query: 703 RGDRSRRD----------DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 + D+ +F +A+ A +++ ++ + + PS + + Sbjct: 651 VLAGEKLAVADRRREVLHDELRMFAQAISRATREVLVT-----AVEGDDNMPSPFLTLIP 705 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHT--RMPFDPQNYQPGERQSYAREWLPAA 810 + L+ ++ LT Sbjct: 706 ---SPDEPVRARPPLSLRGLVGVLRRELTTSANPGAAASSLARLAREGVPGADPSSWYGL 762 Query: 811 SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 P V ++ F + P+ + +L Sbjct: 763 RSPSTTAPLVDLSEPDAK-VRVSPSRMESFESCPL-HWAIDQLG-------------GST 807 Query: 871 ILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC-----QEMQ 925 + + + + + ++ + A + E Q + Sbjct: 808 SNTASNLGTLIHGVAETATDFNAEALFKAVEDRWSEMSFEASWQSEAEKLRAKKLTQHLA 867 Query: 926 QLADRVIACRQPGQSME--IDLACNGVQITGWLPQVQPDGLLRWRPSLLS-------VAQ 976 A S E L ++G + +V+ G L + Sbjct: 868 TYLRDFTANGGELISNEMGFTLPLEQALLSGKIDRVEMYGGTTAVIVDLKTGKNEPSTDK 927 Query: 977 GMQLWLEHLVYCAS 990 + + Y + Sbjct: 928 AVADHPQLAAYQLA 941 >UniRef50_C0VQH4 Helicase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VQH4_9CORY Length = 1025 Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats. Identities = 88/653 (13%), Positives = 164/653 (25%), Gaps = 107/653 (16%) Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 H+ V+ L + + D++V+ + A A Sbjct: 326 RIIYTHTAGDNFSVIARELRE-VHLIRDIPWEDMVVITRSLSQI-----PALQRALATAD 379 Query: 435 LPYAISD-RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P I +++A + + + ED++ L P+ LR + Sbjct: 380 VPVHIDSTDVVLVEQSIVQAMLQAVDIVMGNGTEEDIIELATGPI----GGADPITLRRI 435 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 ++ + E G + E Sbjct: 436 QREIGELG----------------------------------------PVVRGAAGVAED 455 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM-------LNAFFLPDAETE 606 + L + L L + R + + LE L + + Sbjct: 456 ARLGEQAESVLTHLSAVIQTGREAVERGDSLELILWSIWEATGLSTSKMYTALRGGPAAA 515 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL--DQERISQRFLAGPVNICTL 664 A + + G + L + L + R Q V + T Sbjct: 516 QANRDLNAMMELFDVAGDYVERVKQPSLEGFIEHLTSQDLPTGVRERQVVAPKAVALLTA 575 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQ-------LAPLGFDLMSQKPKRGD-----RSRRDDD 712 + V L G +D +P DL+ + R R ++ Sbjct: 576 HGAIDDEWNTVILAGADDDSWPSLGLTGTIFDQEELVDLIDENVDPDAYIDRLRERLHEE 635 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 + LF A L I+ I + +D+ PS V++L + S + +S Sbjct: 636 QRLFSLVTSRATDTLVITAINPAEEDSPLPQPSRFVRKLEEDETFSVSTVVETDELAVKS 695 Query: 773 EARVKAHLTCLHTRMPFDPQNYQ--PGERQSYAREWLPAASQ---AGKAHSEFVQPL-PF 826 A L T + + A A G A QPL Sbjct: 696 SRPFIAELRRALTSADSSDEEKEEAADLLAMLADAGFSEAEPTNWWGLAGPTDAQPLREP 755 Query: 827 TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN 886 P T+ ++ P++ T L + L Sbjct: 756 GQPATLSPSQVESGLQCPLKMVLNSV--------------TPTESSSALREGNLLHALAE 801 Query: 887 A-------LVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ 939 A +AE+L + + E + M ++ Sbjct: 802 ASVTLQQDEETWKEAEQLVLDAYLSSRTVPPWKEKADEEEFVEVMNATVSKMTNLAGDLV 861 Query: 940 SMEIDLACN--------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 +EI + ++I G L +V D R + L + + E Sbjct: 862 GVEIPMDVTVGQLDDGSPIRIKGRLDRVHRDSEGRMKVYDLKTGRSAPTYQEA 914 >UniRef50_A8VW69 Phospholipase D/Transphosphatidylase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VW69_9BACI Length = 1244 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 47/429 (10%), Positives = 117/429 (27%), Gaps = 87/429 (20%) Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE----- 399 L + + V E ++ P D Q E + + +M E Sbjct: 518 LVHVQLVNVAENESETEPHQTPDSDSDEKEQDLSAA--QAEARSMIASIKSMTESSSVFD 575 Query: 400 -----DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 + ++ RDI+++V + F +P + ++ Sbjct: 576 PSTGHERPVSYRDIVILVRSMTWADT-----FMEEFKAAGIPMYADLSNGYFTAIEVQIM 630 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 I+LL + D+ + ++L P++ ++ + + +R Sbjct: 631 IALLKIIDNPKQDVPLASVLRSPIV----GLSADEMAEIR-------------------- 666 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG-HLASLLMQLNI 573 + + ++ Y + + E + + S L +L+ Sbjct: 667 ---------------------IDLPSSDFFSAIHHYADQDQVENESLQIKVKSFLTKLDE 705 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 WR + RD + + + Sbjct: 706 WRSSARSTALSSLIWKLYRDTGYYDYAGGMPGGKQRQANLKALYDRAKAYEKTSFRGLYR 765 Query: 634 LSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG-------- 683 ++ +R D E + V + T+ + + F +V + G+N Sbjct: 766 FLSFIAKMQERGDDLGEARAIGEQEDVVRLMTIHKSKGLEFPIVFIPGINREFNQMDLRK 825 Query: 684 ------------VY--PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + P + R ++ + A+ A+++L++ Sbjct: 826 SYLMHQKHGFGTQWFDPELRVLYPSVQHELMKEISRREMLAEEMRVLYVAMTRAKEQLHL 885 Query: 730 SYIGRSIQD 738 G+++ D Sbjct: 886 IGSGKNLPD 894 >UniRef50_A9EBT7 Superfamily I DNA and RNA helicase n=1 Tax=Kordia algicida OT-1 RepID=A9EBT7_9FLAO Length = 914 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 70/722 (9%), Positives = 176/722 (24%), Gaps = 169/722 (23%) Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL----- 370 L + + F + D ++ + + A + + + ++ Sbjct: 251 RLSDVKYIQQFKERYKDVSYIKLEDNFRSSKGIIDAAIKCITNNTQRLPKIMNAKGHQRF 310 Query: 371 -DSSITFHVCHSPQREVEVLHDRLLAMLEED---------PTLTPRDIIVMVADIDSYSP 420 D I ++ + E + + + + + ++ L D +++ + Sbjct: 311 RDGDIIYNQYEDVESENQFIAETIQKLRGKEFQDRNGGAKRGLDYSDCAILLRTWKKATS 370 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 ++ A +P+ +S P ++A ++ ++ Sbjct: 371 IME-----MLAAHNIPFVVSGVNNLFERPEIKASKAIYQYLNND---------------- 409 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 I E+ L + ++ + +++A Sbjct: 410 ----IEEDTL-------------------------------KAYWEAVSENIKSEDIDAA 434 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 P + + + + + + + Sbjct: 435 IEAISKKKPNPKMYFSTFNIQEIFWTFIEK--------------AKLSEEVFADKEHEGI 480 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV--PLSLLRDELAQRLDQE-----RISQR 653 + + + II + + D L + L D + Sbjct: 481 VGNDINEVIYYNLGMFSQIINDYASIHFKDKPIWKLKGFLNFLRYSADGYYPEGWLNNSY 540 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP-RQLAPLGFDLMSQKPKRGDRSRR--- 709 V I T+ + + F +V + G+N P ++ ++ D+ R Sbjct: 541 KTPNAVQIMTVYQSKGLEFPIVFVPGLNKNYLPIKRPGGKQIWHFIEREWIKDQHRLEVS 600 Query: 710 -DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 + +R LF A+ +Q+ L+I+ + E S +E+ + Sbjct: 601 EEAERRLFYVAITRSQKYLFITRSKENRLYQKE---SPFAKEVSN--------------- 642 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 + Y+ + P Sbjct: 643 ----------------------SDYIISDKNPDYSH-----------LENLTPTPKKEAG 669 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 + L+ F+ P R F + +E I L + Sbjct: 670 AIQLNFSVLKAFFDCPYRFKLISLYG--FVSPITERMGYGNSIHNVLME---MHR---RH 721 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ------PGQSME 942 + +D + + I + Q +A + E Sbjct: 722 LNGEDVSNINIDELVENHVHIPYATNIVLDNIKQTTNNVATAYLEENHKEFDNIEYAEQE 781 Query: 943 IDLACN-GVQITGWLP---QVQPDGLLRWRPSLLSVAQGMQL---WLEHLVYCASGGNGE 995 I + G+ + G + ++ DG + Q +E L A G Sbjct: 782 IQIDLGDGIMVNGRMDLIKKIDLDGNESTTIIDFKSKKESQDQDITMEQLSMYALGYKEL 841 Query: 996 SR 997 + Sbjct: 842 TG 843 >UniRef50_Q043G6 ATP-dependent helicase/nuclease subunit A n=25 Tax=Lactobacillus RepID=ADDA_LACGA Length = 1204 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 68/581 (11%), Positives = 162/581 (27%), Gaps = 114/581 (19%) Query: 385 EVEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 EV+++ R+ + E+ L DI ++ +Q A Sbjct: 540 EVQMVIARIKQLKAENFQVWDRRTQLKRPLEYSDIAIITRTRSDNLQVMQE-----FAKA 594 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 LP ++D + L ++ L L D+ ++A++ P+ F+ E L + Sbjct: 595 DLPLFVTDAQNYFQTFELIMIMNYLRLIDNPQQDIPLVAVMRSPL----FNFKEPELAQI 650 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R Sbjct: 651 RVKTPAGNFY--------------------------------------------TALTSF 666 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 + + + L L QL R A + E + + L Sbjct: 667 ASVNSSLGKKCKEFLQQLETLR-SFAATHRISELIWSIYE--KTHLLEIVTGLPNGQQRR 723 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF-----LAGPVNICTLMPMR 668 +++ + L + + ++ + V + T+ + Sbjct: 724 VNLESLYERATSYESAGFKGLYQFISFIERMRKNQKDLAQPLLSDKADNAVKLMTIHASK 783 Query: 669 SIPFKVVCLLGMND--------GVYPRQLAPLGFDLMSQKPKRG-----------DRSRR 709 + F +V ++G+ G + LG + + + + Sbjct: 784 GLEFPIVFVMGLGHQYQTRDLSGNFTISQNELGLTIKEKNYRIDSLVKSLADVQKRQQML 843 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS---------VLVQEL-----IDYI 755 +++ + L AQQKL + I++ +++ S LV+++ +D++ Sbjct: 844 EEEARILYVGLTRAQQKLILVASVNEIENKRKKWVSELDQKKDIIPLVKKINAQSPLDFL 903 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 G + + + ++ + + D + + ++ ++E ++ K Sbjct: 904 GPKLEQKHEFDQTIRDMTSALEEQDKLYYLKFNLDLEPEKIKDQNEDSQEVNSNVNKVVK 963 Query: 816 AHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE 873 F P T + +++ + P+ + ++ + D P LE Sbjct: 964 ELYNFKYPFEDATKTTAYQSVSEIKKAFNDPIDTELENSRLISSSNRYLQPIDETPTFLE 1023 Query: 874 -----GLSRYQINQQLLN--ALVEQDDAERLFRRFRAAGDL 907 G +L D E L + +L Sbjct: 1024 GQKFTGAEIGTAMHLVLQYYNYEGNKDQENLDQEIDQLVEL 1064 >UniRef50_C5V6X1 DNA helicase/exodeoxyribonuclease V, subunit B n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V6X1_9PROT Length = 902 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 105/812 (12%), Positives = 202/812 (24%), Gaps = 127/812 (15%) Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG------------- 307 + + E + + A + LA + Sbjct: 107 AYQAQSGVAMQFEARVVHELWYAMAAHDELDVTAAYQQRLAILAQQVTMPLFVLQTCDLD 166 Query: 308 RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 + L+ + F LL L + S + ++ Sbjct: 167 APEMRFLAACRERVRVTVF---DLRELLGMDAGCALLSAALQQELHGEDLRSAAQSRVAG 223 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 L I H ++E + ++ L E T I V+V D + Sbjct: 224 VALTDRIGLFGAHGMEQEAQAADVQVRRWLLEGKTA----IAVVVQDR-----MVARRLR 274 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD-IT 486 + + + V + L F +DVL LL P L A + Sbjct: 275 ALLERARVMVQDETGWTFATLSVSTVLMRWLEAVQGDFYYQDVLDLLKSPFLFAENQVLR 334 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 ++ Q V G+ Sbjct: 335 KQAAYQFEQLVRRHGV-------------------------------------------- 350 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER-PLEEWLPVCRDMLNAFFLPDAET 605 VL +E L L++L R L L WL L+ + Sbjct: 351 VLHLNEHIAAAEREAPELVPALVRLRQAARLLTARHASLSGWLSALHQSLDLLGVIHGWR 410 Query: 606 EAAM-TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 + A + Q E + S R L+Q+LD + PV L Sbjct: 411 QDAAGQQLMQLLALWQEELQAD--TTSCSFSEWRRWLSQQLDLNTYRDLSVDSPVLFTHL 468 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR------SRRDDDRYLFLE 718 R F V LLG + G P + + + + G + DD L L Sbjct: 469 AATRWRCFDAVLLLGCDAGHLPAPVNAGLWFNDAVRTTLGLPLSCVQQDQVRDDL-LSLL 527 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 A+ + ++ + S + + H L L E + Sbjct: 528 AMNG-----TVLATWQANCNGEPNLLSPYF----EMLRAMHLLAFGHDLMNVELGGLLPL 578 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQ 838 D + + + + A P +P+ + Sbjct: 579 AQV---RIQDSDRKGLPRTTKVLHTKFLREGCRIQDPAKMPRPVVPPELIPQKISPSGYN 635 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD----- 893 A P + F + L +N + E L+ ++L + Sbjct: 636 SLVACPYQYFARHVLHLNELDDVRED-------LDKRDYGTWVHEVLQRFHAEIPQLGSR 688 Query: 894 ----AERLFRRFRAA---GDLPYGAFGEIFWETQCQEMQQLADRVIA-----CRQPGQSM 941 AER+ RR L + + + + + R + Sbjct: 689 DKGEAERVLRRISDEVFANALAHDYLAQAWLLRWQGLIPAYLHWQLEIEADGWRYHAAEV 748 Query: 942 EIDLAC-NGVQITGWLPQVQPD-------GLLRWRPSLLSV--AQGMQLWLEHLVYCASG 991 ++A + + G L +V ++ ++ + + + + C + Sbjct: 749 PFEVAVSGNLLLRGRLDRVDVSVENADAFAVIDYKTQSIQGLKNKLKSPGEDVQLACYAH 808 Query: 992 GNGESRLFLRKDGEWRFPPLAAEQALHYLSQL 1023 + ++ ++ + L+QL Sbjct: 809 VQAAKTAAFVSLDDDTVQAVSPDEEIDELAQL 840 >UniRef50_B5RLS9 DNA helicase n=24 Tax=Borrelia RepID=B5RLS9_BORDL Length = 698 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 64/506 (12%), Positives = 148/506 (29%), Gaps = 90/506 (17%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV-GNPLLASWGKLGRDYIY 312 ++ R + ++ + + +L+ D V G+ + + G Sbjct: 199 ENIRMRVQKRFKAIFVDEYQDTNYSQFLFLRELYYKDAYFMVVGDEDQSIYSFRGARVEN 258 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS 372 +L E + D L L + N A ++ + + + Sbjct: 259 IL-------EFERTFDNVSKYYLVQNYRSSLSIVNVANNIISKNQNRYDKVIATENKIGK 311 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 I + +P E E + L+ E V+ F A Sbjct: 312 KIKIFIFQNPTEEAEYFANFLIENKLET--------AVLYR-----FNHQSLQFEKAFFK 358 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 + + I ++ ISLL L ++ L +++ P + + + Sbjct: 359 NNIAHKILGSIRFYEREEIKDVISLLRLFVNKKDKVSFLRIINKPA----RGLGKTTIDK 414 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 + +N++ + + + + ++ Sbjct: 415 IIATLNDTDVNLDLMLASRKVVK------------------------------------N 438 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR---DMLNAFFLPDAETEAAM 609 G + + SL +L + L E++ + N + D + ++ Sbjct: 439 LKGKARDSLDIFLSLYDELKENIQK-GIYVNLSEFIKDVTMGFGIWNYYQKFDKDEKS-- 495 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + +I+ G+ L L + A V + ++ ++ Sbjct: 496 ----KNIDELISSGVEYSG----SFEGLVIFLENS-SLSPLVHGDFASSVLLSSIHGVKG 546 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V + G+ G+ P ++ L D R +++R LF A+ A+ +L+I Sbjct: 547 LEFDRVIISGLEKGLLPAEIEELTAD------------RLEEERRLFYVAITRAKFELFI 594 Query: 730 SYIGRSIQDN--SERFPSVLVQELID 753 + + SV QE+ Sbjct: 595 TINLQRFFRGILKNTAISVFFQEIHK 620 >UniRef50_C0CXS0 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CXS0_9CLOT Length = 851 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 62/396 (15%), Positives = 129/396 (32%), Gaps = 73/396 (18%) Query: 385 EVEVLHDRLLAML-------------EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 E ++ R+ ++ EE + D+++++ + +S VF + Sbjct: 167 EARMVAIRIRELMDPENGLMVWDKGAEEYRPVRLGDMVILLRSLSGWS----EVFVNVLM 222 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 + +P + + +E +SLL++ D+ + A++ P++ +T+E + Sbjct: 223 NEGIPAYAQTKTGYFNTVEVETVLSLLAVVDNPMQDIPLAAVMKSPMV----SMTDEEMA 278 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 W+ + R T G R + G M + + V + Sbjct: 279 ----WMMAAYKR-------------------TPEKGQDRGVYGAFMHWKENGGEGVDAPE 315 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 E+ I E + L +LL L R L + L + E Sbjct: 316 EAVEAIGEKLACLETLLEGLRRDARYLPVHQLLYRAFEA--GGYYDYVSAMPAGETRRAN 373 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRS 669 ++ + IA Y ++L + E A V I ++ + Sbjct: 374 LDMLVEKAIA-YEATSYKGLFHFIRYIEKLKKYDTDFGEANVAGEQADTVRIMSIHKSKG 432 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ-----------------------KPKRGDR 706 + F VV L GM + +Q A L + +R + Sbjct: 433 LEFPVVFLAGMG-KRFNKQDAYGAVLLDADLGLAADYLDLKQRLKMPTLKKQALKRRMEL 491 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 ++ + A+ A++KL ++ RS+ E+ Sbjct: 492 ESMGEELRVLYVAMTRAKEKLIMTATDRSLGSKMEK 527 >UniRef50_B8HBQ6 UvrD/REP helicase n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HBQ6_ARTCA Length = 1115 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 104/731 (14%), Positives = 188/731 (25%), Gaps = 105/731 (14%) Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILE--LENRAVAGVNIEEFSRSDNKRPLDP 369 L+++L DA V P H + + E L ++ Sbjct: 342 DLVAELPRLLSPDATVLERPLWHAHRLAPAVAEAWLGVAGRISQRAGGQLSRRLEQTAGD 401 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + H+ S E+ + R+L + D+ V+V + + Sbjct: 402 APGRVEAHLVPSAVHELRYVAQRILDQ-HIGQGRSLTDVAVIVRNGGQV-----SELQRY 455 Query: 430 PADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSR--FVSEDVLALLDVPVLAARFDIT 486 + + +P + A + + + ++ E ++LL + A Sbjct: 456 LSGQGIPVRVPVAESAVRDEVAVRPLLDAYAIALDTALLTPEAAVSLLTSRIGGATPLEL 515 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + LR+ +G G D V L P + + G A QS Sbjct: 516 RRLRQSLRREELTAGGGRGSDSLLVEALLEPG-------ALGSLGIEGRAARRTARMIQS 568 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 G AE V + W Sbjct: 569 GRQAARQPGANAESV------------LWALWSATGLSAAWTETA-------LAGGPHGA 609 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD-ELAQRLDQERISQRFL-AGPVNICTL 664 A ++ + L Q L + ++ R V I T Sbjct: 610 RADRDLDAMMALFHTAERYVDQMPGAGPEQFLEYLLNQELPMDTLAARAQVDDAVEIMTP 669 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD---LMSQKPKRGD------------RSRR 709 + VV + G+ +GV+P L + + G R R Sbjct: 670 ASAAGRQWPVVLIAGLQEGVWPNTRLRGELLGSTLYADAVEHGTSYALQRDPLSRLRDIR 729 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 D+ F A+ A++ L + + PS + + G A+ Sbjct: 730 YDELRSFSTAVSRAEELLICTAVASEDD-----QPSSFLD-YAAPLAPGEDARGFTAVER 783 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL----- 824 + + A L Q A E P A +QPL Sbjct: 784 PMTLRALVAELRQHAQLEGAQAQEAARVLAGLAAAE--PPVPGAHPDSWWGIQPLTSTDA 841 Query: 825 --PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 P V ++ P+ F Q D S + Sbjct: 842 VVPPGSTVFVSPSKVESVQKSPLDWFVQAAGG-------EAATDF------ARSLGTLVH 888 Query: 883 QLLNALVEQDDAERLFRRFRAAGDL--PYGAFGEIFWETQCQEMQQLADRVIACRQPGQ- 939 + + E E + R L G + + +++LA V+ R G+ Sbjct: 889 AIAQDMPEASGQEYVAELARRWPQLGMKDNWEGRLDHQRAEAMVRKLAQYVLVMRGSGRS 948 Query: 940 ----SMEIDLACNGV----------QITGWLPQVQPDGLLRWRPSLLSVAQGMQL----- 980 + D+A V + G + +++ DG R L + Sbjct: 949 LLGVEQDFDVALGEVLLDDASPREAVLRGQVDRLEIDGEGRLVIVDLKTGKRQPGKTELA 1008 Query: 981 -WLEHLVYCAS 990 + Y A+ Sbjct: 1009 SHPQLGAYQAA 1019 >UniRef50_B5EW84 ATP-dependent DNA helicase Rep n=1 Tax=Vibrio fischeri MJ11 RepID=B5EW84_VIBFM Length = 762 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 43/388 (11%), Positives = 118/388 (30%), Gaps = 43/388 (11%) Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 + +E + +++LA+ + + P++I ++ + R + Sbjct: 366 VTCYENEDQEAHNIVNKILALKAD--GIAPQNIGILYRFNKLGQNM-----ENYLISRGV 418 Query: 436 PYA-ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 Y I + + P + + L L + + + + F +T E L Sbjct: 419 SYRRIGNDKGLYEEPDIRDIVIYLHLIFNPYSIKAIRCFFAS---FIEFGVTTEALNSAI 475 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL---------GYAMESAQGEWQ 545 + G + + + + + + + L+R+L Sbjct: 476 KSFQGRGDKRINNHQLLSFIVERGICKPSTKEHLSRVLKIIMHCSGLSSRITSFDSYCRS 535 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 Y + V L Q R ++E + + F A+ Sbjct: 536 VNEQYTNMPSDHCKAVEK--RLQEQFWGAVRDF-----VKELSTIYVEQYKYMFYSQADQ 588 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI---SQRFLAGPVNIC 662 + + + + A Y + + + L + R +++ + + Sbjct: 589 QKRLKMSRELATKHYHLIFNACYDEELSETNLTQYICTRPLLDKVTKKDDEENTTDIELM 648 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 T+ + + + + ++G ++ + + + + +++ LF AL Sbjct: 649 TIHASKGLEKEAIFIIGCSEESW-----------WKESDIKAGTDKYEEELRLFYVALTR 697 Query: 723 AQQKLYISYIGRSIQDNSERF--PSVLV 748 A + L+ +Y N+E+ P + Sbjct: 698 AIEHLFFTYSATRSFRNTEQPCNPLRFL 725 >UniRef50_B0MQS7 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQS7_9FIRM Length = 1235 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 52/423 (12%), Positives = 116/423 (27%), Gaps = 57/423 (13%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR----EVEVLHDRLLAMLEED-- 400 + A G I + + D + + + E + R+ M+ + Sbjct: 480 DYAENGRLICGLEKDSDSPISDEDKTEVCIVSEKDRKNAVVTEAAYIAARIKQMIAQGYK 539 Query: 401 -----PTLTPRDIIVMVADI-DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 T D +++ + + ++ + L + R P + Sbjct: 540 VGSDKRPCTEDDFAIIMRSPKNRIADYV-----NVLTANGLNVTYNQRAVLLDRPEIRLM 594 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 +SLL + + + ++ +L P+ T + + LR +G D +R Sbjct: 595 LSLLKVINDPYNDTELAKVLMSPLYC----FTADDMARLRT------GTFGFDISKIRAE 644 Query: 515 ELPATGQHTWRFGL-----TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 ++ + L M++ +G S + A + Sbjct: 645 CADELEKYCLGTKEIVGMKRKPLYSCVMQAVRGYDTSEYEKLHELTKDIKPDAKCAVFVN 704 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 L+ +R P E + + L + A + + E + G Sbjct: 705 DLDSFRNAATASSPQELIRNIYDRISADELLSVGDDPATRQANLELLVSYAREYSDYKDG 764 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM----NDGV- 684 + + + + +Q V I + + + F VV + ND Sbjct: 765 GTLGDLIFN---LENMSSLTAAQTAGGHGVKIMSTHMSKGLQFPVVFVANCASSFNDDDY 821 Query: 685 ---------YPRQLAPLGFDLMSQKPKRG--------DRSRRDDDRYLFLEALISAQQKL 727 Y + MS+ + ++ L A A+ KL Sbjct: 822 TGDVVISEEYAVASKSVDISTMSKIQSPAYHAAAQEVKKQLESEEMRLLYVAATRAENKL 881 Query: 728 YIS 730 + Sbjct: 882 IFT 884 >UniRef50_A7BEI5 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BEI5_9ACTO Length = 1078 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 102/779 (13%), Positives = 207/779 (26%), Gaps = 113/779 (14%) Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK-RPLDPLDSSIT 375 L+ V++ ++++ + EL +A A + D + ++ Sbjct: 312 LDRRLASALGVEIAELGQVYDMSRAVRELARQACARIAQSGSPARREAGVADDAPEGALV 371 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 H+ +P + ++ L + + D +V+V + A + Sbjct: 372 THLGATPSQMGALIARALRS-HHLHDGIDFSDQVVIVRSSSMVAET-----SRYLARGGV 425 Query: 436 PYAISDRR-ARQSHPVLEAFISLLSLPDSRFV------SEDVLALLDVPVLAARFDITEE 488 P A R + P + L+++P E LL P++ Sbjct: 426 PVAGGGRAFDFATQPTTRLLLDLVTMPTGTSDTDVAQRRELAERLLPSPLVR-------A 478 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + + + + P + + Q + Sbjct: 479 DALAIHRLLRRLNAARAQAAEEAGGESAPIP-----------LTAADLVSDPQTWRPFIE 527 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRG-LAQERPLEEWLPVCRD-------MLNAFFL 600 +++ G A LA L ++ +E L + + Sbjct: 528 QAEQAGGKRARAATMLARPLETAARLWELGMSGSVRPQERLWSLWEASGVAGEWRSRAIA 587 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD--QERISQRFLAGP 658 D + ++ + + Q A EL G Sbjct: 588 SDDSSGWYDDQLDAVVALLRVADVWEQRNPAGSAVGFASELLAGSVPIDTISRVGVRPGG 647 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD---------------------LM 697 V + T ++VV L G+ DG +P + Sbjct: 648 VEVLTPAQAMGRHWQVVVLAGLQDGAWPNLRLRDRILRADLLADVGAGRVAVGEDGREEL 707 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 + R+ DD+ LF+ A+ ++ S + + + PSV L+ Y+ Sbjct: 708 IDSTRAARRAVLDDEYRLFVAAVTRSR-----SIVHAGAVRSEDAAPSVFFD-LVAYLAG 761 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH 817 +H ++ E+ + H+ L R + + + + H Sbjct: 762 THRENDIVPVDPVEAPLSLSGHIADLRARAANSDEPADAQLAATLLALMAREGIASAQPH 821 Query: 818 SEFVQPLPFTLPE------TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI 871 T + + +R A P+R F + + + Sbjct: 822 RWLGAGGTPTSAQDYRGQIVLSPSQFERALACPLRWFLTTI-GADAPSNAAASL------ 874 Query: 872 LEGLSRYQINQQLLNALVEQDDA---ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLA 928 + + E L R G G + + + LA Sbjct: 875 ------GTLVHAVAEEHPHGTPEELTEALEARIEELGYNLDTWAGRVSDRHAREIVNNLA 928 Query: 929 DRVIACRQPGQ-SMEIDLACNGVQITGWLPQV-QPDGLLRWR--------PSLLSVAQGM 978 V+ + GV I G + ++ Q D +R + SVA+ Sbjct: 929 SYVVGVPGEVTVEQTVSSEVEGVTIRGRMDRLEQVDEGVRVTDLKTGKSGYTKASVAENP 988 Query: 979 QLWLEHLVYCASGGNGESRLF----LRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSA 1033 QL + ASG K + P L E+ +E +RE + Sbjct: 989 QLAAYQMAMLASGEKVAGARIALLGGSKPQIYDQPALQGEE--------LERWRESVRE 1039 >UniRef50_Q1D938 Putative uncharacterized protein n=2 Tax=Cystobacterineae RepID=Q1D938_MYXXD Length = 1079 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 76/629 (12%), Positives = 154/629 (24%), Gaps = 88/629 (13%) Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + L S+ + + E +L + +L + P DI V ++ + Sbjct: 260 RAPRDVLKDAVPSLRVWNAATARDEARLLARDVRRLLA--EGVAPGDIAVAYRELGPEAG 317 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 ++ + + +P + + + L L + F E + L+ Sbjct: 318 WL----AESLGELGVPVRLPWGEPLGLAGPVRLALDLPLLVEDGFPVERMAELMGSRYAP 373 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGI-DDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + L R G ++ L + TR Sbjct: 374 KLSRGGPDAPATLFAQAAVRDDRLGAVRGRGAYDVRLDGLARRLLALNGTRKAQDSTRVD 433 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 A + + G A LL L P L A Sbjct: 434 AVKLLRERCLLLVEACRRIPEEGTAAELLAAWWQVVERLGLVDSEGALAPREEGGLGARA 493 Query: 600 LPDAETEAAMTLIEQQ-WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 + A + Q + G + L + + R G Sbjct: 494 ADARARDDAAREALRLRVQGLTRMMKAVGGGPKMRRRTFGRWLRDAMADAHLPPRGPRGA 553 Query: 659 -VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V + + + F+ + L G+ +G +P + AP +++ RD R Sbjct: 554 AVEVLDVAELPGRSFQDLFLAGLTEGRFPGRDAPSPLLADAERAALNKHLGRDVFR---- 609 Query: 718 EALI------SAQQKLY------------------ISYIGRSIQDNSERFPSVLVQELID 753 L A +L +S+ S E+ PS ++E+ Sbjct: 610 --LTGGEFDERAAWRLTEDRLLFASALAAAEANVSLSFAVESA-GGQEQVPSAFLEEVRR 666 Query: 754 Y---------------IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE 798 + + E+ ++ K +T + + P Sbjct: 667 LTALKWEPRSLSPIPPLDEVLTESELRRCVALEALSQPKLRVTEPDAAAAVLRRRFAPEA 726 Query: 799 RQSYAREW--------------------LPAASQAGKAHSEFVQPLPFTLPETVPLETLQ 838 + ARE + + F + + L Sbjct: 727 WYAGARELSEVEMERLFFFGDPKVQPGPYSGSVDLDTQRESLRETFRFDITRPLSASALA 786 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF 898 RF + F L+V E + R +++ + ++L Sbjct: 787 RFGNCGFQGFLSYGLKVAEPDVPGE-------EFDARGRGTFWHKVVEEVFAALKEKQLL 839 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 G P E+ ++ Sbjct: 840 ------GKAPEEVPDEVLDAALKAAIKDF 862 >UniRef50_Q2NB36 Helicase n=4 Tax=Sphingomonadales RepID=Q2NB36_ERYLH Length = 994 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 126/1007 (12%), Positives = 251/1007 (24%), Gaps = 165/1007 (16%) Query: 108 FTLLRHYLTDD-SDKRKLFQLSSKAADLFDQYLVY--RPDWLAQWETGHLVEGLGEAQAW 164 +LR + DD LF L+ + A D+ LV P+ L Q + + A+ W Sbjct: 116 AEVLRDVMGDDAPQGASLFVLARETAQTMDRLLVEDIGPEELLQ-DRVLDLFDRDLAKHW 174 Query: 165 QAPLWK----ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 Q L + + A R E P + G+++ Sbjct: 175 QDNLRRFAKVQQFWLAELGERGALDAAARRNRLFERAAKRWKAEPPATP-IVAAGVTSAA 233 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 P + L+ + + + ++ + D A + R Sbjct: 234 PALARLLRVVSELPQGAVILPD---------LDLTMDAAVWEELGRAGAPAASGGAPFAK 284 Query: 281 ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS 340 ++A + LL G + RD ++ P + + + Sbjct: 285 DDAVTHPQYHLKL-----LLNRMG-VSRD------------------EIQPWHRKGSGAA 320 Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 + + E + S I +P+ E + + + L E Sbjct: 321 RSERSHAVSAVFLPPEASKVWVDLPSEKRHLSGIRLMELPNPEAEAQAVALAVRQALAEP 380 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 R + V+ D + + + S R F+ L + Sbjct: 381 E----RRVAVITPDRNLARRVV-----HHLRRWNIEADDSAGRPLAQTTAGRLFLLLAEV 431 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 + ++ALL P++ RQW+ + Sbjct: 432 MGTNAAPVPLMALLGHPLVRQG--------EERRQWLRDLR------------------- 464 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 L R L G + V + + L G Sbjct: 465 ------ALERKLRGSRPAPGLAAIRPVAREAQVID--------WWEEVEALLGPLAGTDD 510 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 L + L + A + + + + + + Sbjct: 511 PLSLADCLDTLAAVGEALCGEALWAQEDGRALSATVEDLRQHARAVG--TQIRRADAHAI 568 Query: 641 LAQRLDQERISQRFLAG-PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 L +DQ + + V I L+ R +V G+N+G +P + + Sbjct: 569 LTDAMDQVAVRPPYGGHPRVAIYGLLEARMSRADLVICAGLNEGSWPGRPSVDPLLAPPV 628 Query: 700 KPKRGDRSRRDDDRYLFLEA--LISA--QQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 G D + L A L A ++ +S R + PS + + + Sbjct: 629 LRALGVPGA---DFRIGLSAHDLAGALGAPEVLLSRSERDAEG--PAIPSRFLLRVKALL 683 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 G+ + L E + A + Sbjct: 684 GELLERYEERDLPR---------------------------------LAERIDDAPLEPR 710 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 P E + + L R + P + + L++ P Sbjct: 711 YQRPEPMPSAEERRERISVTALDRLRSDPYQFYASAILRLKELDGLDAEP-------TPA 763 Query: 876 SRYQINQQLLN-ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC 934 + Q+ +L + + D + WE + + + I Sbjct: 764 WQGQLAHDILEHWHEHGGSLPDIAKAKLTEMD--HHPLTRALWEPRLMKALEWVASEIEG 821 Query: 935 RQPGQSMEI----DLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCAS 990 + ++ GV I G + ++ + + + Sbjct: 822 DMDRTPVLWEKWGEIEHRGVTIFGRIDRLDRLADGTFAVVDYKTGSPPSG--SQVEAGYA 879 Query: 991 GGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCY 1050 G L + K G + A A Y S + + E+G +++T Sbjct: 880 LQLGTLGLMVGKGGFAKHGIHGAASAFEYWS--LAKAKSATH-------ETGFGYIETPL 930 Query: 1051 DAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQL 1097 D K + + GD+ + RL Sbjct: 931 KISGKRSGIDPEEF---LPKAADYLDDALSRWVLGDEPFTARLNPDA 974 >UniRef50_B8DQ46 UvrD/REP helicase n=13 Tax=Desulfovibrionales RepID=B8DQ46_DESVM Length = 789 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 63/560 (11%), Positives = 135/560 (24%), Gaps = 107/560 (19%) Query: 250 DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD 309 D + ++ + + L E + D + A G R+ Sbjct: 223 DWCRARFRYIMVDEYQDTNLVQARLVHLLAGEGGNVMAVGDD----AQSIYAFRGADVRN 278 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 + ++Q + + + ++ + IL +A Sbjct: 279 ILDFPKLFPAAQIIKLEENYRSVQPVLDLTNAILAEAPQA----------YRKKLFAARE 328 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 S + ++ R++ L P DI V+ Y + V Sbjct: 329 GGDRPQVVRPLSDLTQASLVVSRIVEFLRS---YPPHDIAVLFR--AGYQSYHVEV---Q 380 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + + ++ +S L + + A + + Sbjct: 381 LNKLGVKFRKYGGLRYSEAAHVKDVLSYARLVLNPLDLPAFQRI-----AAMSKGVGPKT 435 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L + + + L P Sbjct: 436 TLKLYDVARQGNP----EATSRACLRYPE------------------------------- 460 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL-EEWLPVCRDMLNAFFLPDAETEAA 608 L + L L+ R+ L EE + + + A F + Sbjct: 461 --------------LRADLDLLDGLRKRPHTPTSLLEEVMEHYKPRMEAAF---PDDWPR 503 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 +Q I A L L +L+ ++ + V + T+ + Sbjct: 504 RQQGLEQLLQIAASYR--------DLDLFISDLSL---EDPGEEEENRDSVVLSTIHSAK 552 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + + V L+ + + +P + A +++R L A A+ L Sbjct: 553 GLEWGAVLLIDLVEERFPSRHA------------IARAEDFEEERRLMYVACTRARDHLC 600 Query: 729 ISYIG----RSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 + R N PS V+EL ++ + L ++ Sbjct: 601 LFVPASLYSRGDGGNQPAVPSPFVRELPAHLFDEMHESYSGGLMRRDAPNGQTGQRGAGF 660 Query: 785 TRMPFDPQNYQPGERQSYAR 804 + G R A Sbjct: 661 GGGRSGGGGFAQGNRFDGAP 680 >UniRef50_Q8ERW5 ATP-dependent helicase/nuclease subunit A n=1 Tax=Oceanobacillus iheyensis RepID=ADDA_OCEIH Length = 1243 Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 46/423 (10%), Positives = 110/423 (26%), Gaps = 90/423 (21%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE-------- 398 + E +N ++ D+ T Q E ++ + Sbjct: 513 DDHPLEAKPELLLIDNNSEDVEQSDNEETVEDLEKAQIEARAYAKQIKNWIGTPEDEIPM 572 Query: 399 --------EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 + L +DI++++ + + + +P Sbjct: 573 QVVDKATGKQRDLQYKDIVILMRSMTW-----ASTIADELQQQGIPTYADLSTGYFEAIE 627 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 ++ +S L + D+ + ++L P++ + E+ L +R Sbjct: 628 IKVMLSFLKVIDNPRQDIPLASILRSPII----GLEEDQLASIR---------------- 667 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 + +++V Y ++ ++ V L + Sbjct: 668 -------------------------LADRKASFYEAVQRYLQNEQDNSDTVKSLIRFMEM 702 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 LN +R+ Q E + R+ F+ + + Sbjct: 703 LNDFRQSARQGSLSELIWDIYRETGYYDFVGAIPGGKQRQANLRALYDRARGYESTSFRG 762 Query: 631 AVPLSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG----- 683 + + +R + V I T+ + + F +V L GMN Sbjct: 763 LYRFLRFIERMEERGKDLGAARALSEQEDVVRIMTIHKSKGLEFPIVILGGMNKEFNQRD 822 Query: 684 -----------------VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + P + + R ++ + AL A++K Sbjct: 823 LSEKYLLHKDLGFASKYIDPVKRIQYPTLYYHAVRQAKFRDMLSEEIRVLYVALTRAKEK 882 Query: 727 LYI 729 L + Sbjct: 883 LLM 885 >UniRef50_UPI0001C352F6 UvrD/REP helicase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C352F6 Length = 565 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 53/451 (11%), Positives = 108/451 (23%), Gaps = 79/451 (17%) Query: 333 NLLHNIQSDILELENRAVAGVNIEEFSRSDNK-----RPLDPLDSSITFHVCHSPQREVE 387 L Q+ L L + I E +R + I ++ +E Sbjct: 83 TLKTRYQAAELSLPVNYRSSNEILEAARCFQQNGGALEGTRGGGEKIVVKNHYNSFQEAC 142 Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 L DR+ + + + +I + V + +PY ++ + Sbjct: 143 YLADRICEL--QKQGIPFDEIAIFYRLQSQ-----SKVMEDVFSKNEIPYEVAVKTGIHE 195 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID 507 P LE + LL + +L I+ + L Sbjct: 196 IPALEWLLRLLRFLADPADRAAAVFVLSSREYGV--GISAKKAEKL-------------- 239 Query: 508 DDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567 A W G + ++A + +G E Sbjct: 240 ----------AEESCAWVCGRKEAQENGSEKAAAPGLFERMVSFARNGAEIEDTNGFYEY 289 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 L E + + + A Sbjct: 290 FD---------------------LDCSLKPNASSYGEDK---ANVCHFLDRMFAFMKAKG 325 Query: 628 YGDAVPLSLLRD---ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 + L + + + V + TL + + F V ++G+N G+ Sbjct: 326 FSLPEGLREFLNSAALYGTSRELLPETDGAGENRVKMMTLHASKGLEFSHVFIIGVNYGL 385 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 P + L D++R LF + A+ L +S+ Sbjct: 386 IPLRTKGLD--------------SEDEERRLFFVGITRARNYLELSWYTNPDIFGVMAGE 431 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 S ++ + + + + R Sbjct: 432 SRYIRMIPSELVKGQESEMRTGTANLQELRR 462 >UniRef50_C5E0S5 ZYRO0G15224p n=1 Tax=Zygosaccharomyces rouxii RepID=C5E0S5_ZYGRO Length = 1161 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 67/510 (13%), Positives = 140/510 (27%), Gaps = 98/510 (19%) Query: 306 LGRDYIYLLSDLESSQELDAFVDVTPDN--LLHNIQSDILELENRAVAGVNIEEFSRSDN 363 L ++ + V+ + +L ++ I + + + Sbjct: 288 LAYNFQEMFRRCPIECSSVVLVENYRSSQKILDTSETLIRQQTEGRTDRLPLRAQYDCIF 347 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL-TPRDIIVMVADIDSYSPFI 422 +S F S RE+ L+ P L + D ++V I Sbjct: 348 APVYLNFPAS--FLEAPSIVREMLY--------LKSLPNLFSYDDFAILVR----QRRQI 393 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 + + +A + +PY I A + I+LL S ++A L P Sbjct: 394 KKI-ETALIEHRVPYKILKGHAFWELKETTSMINLLKCVYSENEKNAMIAALQYPA---- 448 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 I LR + I D ++G A S Sbjct: 449 RGIGPATAERLRTIIESKDISP-FDTLKRIREGRIKFD-----------MIGKARSSLID 496 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIW-------------RRGLAQERPLEEWLP 589 + + ++ L + +L ++ + +L Sbjct: 497 FVNMIEACKKLREAPIDVA--LKEIFDKLYESSGMKQEYCYFDGKKKADRKPDSEPNYLN 554 Query: 590 VCRD---MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 +L +FL ++ + G + L+ + + Sbjct: 555 PRHRNVLVLRDYFLGTNSGNENGGVVTDSVDNTVVSGNNDKSDPMTNLNSVMEHFRNFFV 614 Query: 647 QERI---------------SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR---- 687 I Q++ G V + T+ + + + VV + G +G+ P Sbjct: 615 SLTIYSNDTEESEEANAIKKQKYSEGLVTVSTIHGAKGLEWPVVFIPGCEEGIIPSLFGD 674 Query: 688 -----------------------QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 P+ + ++K +++R +F A A+ Sbjct: 675 GRSSNLEGDDDEDSENESDEEQKSEKPVTDNNSTKKKTVVPDDSLNEERRMFFVAQTRAK 734 Query: 725 QKLYISYIGRSIQDNS-ERFPSVLV-QELI 752 LY+S + +D PS + +EL+ Sbjct: 735 HLLYLSSVT--DRDGRVPAVPSRFLTKELL 762 >UniRef50_Q2SYL0 Superfamily I DNA and RNA helicases n=2 Tax=Burkholderia thailandensis E264 RepID=Q2SYL0_BURTA Length = 920 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 91/755 (12%), Positives = 194/755 (25%), Gaps = 161/755 (21%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDY 310 ++ +L R + ++ + +L VG+ + G + Sbjct: 211 RNRELRERLALRVKHVIVDEYQDVNPVQEAIVAELRQLGADICVVGDDDQTIYQWRGSEV 270 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE------LENRAVAGVNIEEFSRSDNK 364 +L+ F D ++ + L ++ +N Sbjct: 271 QNILT----------FDRRYNDVTQVRLEENFRSSEGVVALAREFISHLNHRLPKEMKAT 320 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAML-------EEDPTLTPRDIIVMVADIDS 417 D I SP+ E E + +A+ + ++ D+ V++ + Sbjct: 321 HAQSYEDGDIVALGFDSPEEEAEYIAKTCMALRGVVVHESSSERGISWSDMAVLLRSVRR 380 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 +P + A A +PY I+ Sbjct: 381 DAPAVTA----ALDAVRVPYVITGMDNLFQ------------------------------ 406 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 +E + RQ + R R LG Sbjct: 407 ---------KEEVEAARQLF---------------YFLAGEIEMNELRAAWQRADLGITK 442 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG--LAQERPLEEWLPVCRDML 595 + +G + + +L Q + L +ER + L Sbjct: 443 HALEGAIAAAAEARVDMQDAEIGQFKVYNLQRQFIAFMEKSELREERVPGGRGEIVFYNL 502 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL--DQERISQR 653 F ++ E+ + A+ + + + Sbjct: 503 GKFSQAISDFESIH-------------FHSDPVEKYKSFAGFLRFHAENAYPEGWQDNGF 549 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL---APLGFDLMSQKPKRGDRSR-- 708 V I T+ + + + VV + + +P + L S+ R R Sbjct: 550 VSPDAVRIMTVHQAKGLQWPVVFIPQLVKNRFPAKGGGGRNAWHLLPSEAFSNAARYRGG 609 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 DD+R LF A+ AQ+ L++++ + + S E++ Sbjct: 610 ADDERRLFYVAVTRAQKYLHMTWAPHEGNR-TAQVASDFYNEVL---------------- 652 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 + VK + TR P Sbjct: 653 ---ASKYVKRRVQNYATRQ------------------------------QLTPAPKASVA 679 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR---YQINQQLL 885 T+ ++ F+ P + ++ F E + + L+ + + + Sbjct: 680 NVTLSFSDVKYFFECPYQFKLRILYG--FNAPLDEALGYGKSLHDALAEVHARALRGETI 737 Query: 886 NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL 945 ++ ++ ER R A DL + +++ A +++EI L Sbjct: 738 DSREAEELIERHLRAPYAYPDLKDK-LKSAAVKVVAAYIRKNAAEFNNLEFSEKAIEIAL 796 Query: 946 ACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL 980 +GV + G + V+ L Q Sbjct: 797 -GDGVSVAGRIDLVRRMDTDEVTIVDLKSNDRAQA 830 >UniRef50_B3PJ81 Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJ81_CELJU Length = 972 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 82/621 (13%), Positives = 172/621 (27%), Gaps = 107/621 (17%) Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP------- 430 C + ++E+ A+L E+ I ++V ++ ++ F S Sbjct: 286 QCITSEQEMLAAARWSQAILAENAQAM---IGIIVPNLGQCRAQLERAFTSVFEPLSVLP 342 Query: 431 --ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 LP+ S S P++ A + LL L + + ED+ LL P + + Sbjct: 343 EHMRFTLPFNFSAGIPLGSTPLVAASLELLGLYQNHWPMEDICQLLLSPF----WGHADA 398 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L Q VN+ L + + S W L Sbjct: 399 ELVLRSQLVNQ----------------------------LRELGRFHISGSDLRYWAQKL 430 Query: 549 PYDESSGLIAELVGHLAS-----LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 ++ G AE LA L+ L RR + P W + +L P Sbjct: 431 ATPKAGGNTAETANRLAEETFLNYLLHLEAQRRDSFGKHPASYWSELFNRLLQHLDWPGE 490 Query: 604 E--TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 + Q Q + G + L Q + + P+ I Sbjct: 491 RRLDSQEHQQLAQWNQLLEDFAQLDACGLQLSYGEALQHLRQIAAKTPFQAQTPLSPIQI 550 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 + + F ++G++ +P +P ++ + ++ + +F +L Sbjct: 551 LGALEGSGLVFSHCWVMGLHHRQWPAAASPNPLLPINLQRQQQMPHASAERELVFARSLT 610 Query: 722 ----SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 ++ S S D+ E PS L++++ Sbjct: 611 QHYRQCAGQVVFSCA--SSLDDQELSPSALIRDI-------------------------- 642 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETL 837 P + + + L + Q + Sbjct: 643 -------PLTPLEQLVPDANSLLADYWQQLLQSRQLEAIEDNTGPAVGKDENIRGGASIF 695 Query: 838 QRFWAHPVRAFFQMRLQVNFRTEDS---EIPDTEPFILEGLS---RY--------QINQQ 883 + A P AF ++RL + + L+ R+ ++++ Sbjct: 696 KEQAACPFNAFARLRLGARIPEAPVTGFSAIERGNMLHNALADLWRWLRDQASLLALDEE 755 Query: 884 LLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ---PGQS 940 L + + R G + ++ E +++ R Sbjct: 756 SLQKQLHTFVNTAVMDTARLRGSSVSAFYTQLEQERLQALLREWLQRERERPAFTVVAIE 815 Query: 941 MEIDLACNGVQITGWLPQVQP 961 I++ G+ + + ++ Sbjct: 816 HPIEVTYAGIPLRLRIDRIDQ 836 >UniRef50_Q1NRJ1 UvrD/REP helicase n=3 Tax=Deltaproteobacteria RepID=Q1NRJ1_9DELT Length = 775 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 60/525 (11%), Positives = 134/525 (25%), Gaps = 79/525 (15%) Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL-LASWGKLGRDYIYLLSDLES 319 R + + L + ++ + + + G + Sbjct: 233 DREVREELAQRFQAILVDEYQDTNPIQAEIVRLLAAQRRNVMAVGDDAQSIYSF--RGAD 290 Query: 320 SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI-EEFSRSDNKRPLDPLDSSIT--F 376 + + F D P + ++ + + G I K+ L+ F Sbjct: 291 FRNIMEFPDHFPGTRVVRLEENYRSIPQILEVGNAIIAPAPVKYPKKLFSRLEGGSRPLF 350 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 H + + + +++ + E L I V+ F + Sbjct: 351 HAARNESEQARFVVEKIKELRRE---LDASQIAVLFRS-----GFHSYKLELELTANGID 402 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 + ++ ++ + + +L I + + Sbjct: 403 FEKRGGLKLTESAHIKDVLAHFRVLCNPADRLSWHR-----LLLLLDKIGPKTAARIIDR 457 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 + G D L G A Sbjct: 458 LPLLEQVAGPGDGQRPLDGS--------LAALKAFPAGKAWGEGMQ-------------- 495 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD-AETEAAMTLIEQQ 615 L LL +N GLA LE+ L + +L + D + + + Sbjct: 496 ------KLLQLLADIND--PGLAPAELLEQVLIYYQPLLRRLYPDDYPRRQRDLEQLRPL 547 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 + ELA + G + + T+ + + ++ V Sbjct: 548 LA------------GYESMDDFLAELALDPSSPEVDDD-GGGRLVLSTVHSAKGLEWEAV 594 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 ++ + +G +P A ++ +++R L A A++ LY+ Y +S Sbjct: 595 FVIHLAEGKFPANQAVG-------------AAQYEEERRLLYVAATRAKRWLYLVYPRQS 641 Query: 736 IQDNSE---RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 + PS + L + + G+ A D A Sbjct: 642 TGADRRPLFCEPSPFLAPLPPELLRGSGSGGEAAGRPDWPSAPPA 686 >UniRef50_A5ZAT8 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZAT8_9FIRM Length = 1220 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 47/388 (12%), Positives = 98/388 (25%), Gaps = 84/388 (21%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTL------------TPRDIIVMVADIDSYSPFIQA 424 E + ++ + + L DI++++ + S Sbjct: 520 VEGGDKSDEAAYVARKIKEITNPETGLKITEKGKDMRPVRYGDIVILLRSMKDNSD---- 575 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 ++ + +P + + ++LS+ D+ + A+L P+ F Sbjct: 576 IYREQLENNGIPVFAESKTGYYKTMEVMTITNMLSIIDNPRQDIPLAAVLTSPM----FG 631 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 L ++ E+ + Sbjct: 632 FDSNQLAIIK------------------------------------------TENVCESF 649 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 + SG EL L L L +R + + + + AF++ Sbjct: 650 YDCVEQYSLSGSDVELRTRLTEFLNTLTKFRNMVPYTTVYDLINTLLDETGYAFYIRSMP 709 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL--DQERISQRFLAGPVNIC 662 L Q + Y +++ D E + V I Sbjct: 710 GGKKRLLNIQALKEKAVAYDETSYKGLFNFLRYIEKIQYLAKDDGEASTVNENDNIVRIM 769 Query: 663 TLMPMRSIPFKVVCLLGMN--------------DGVY------PRQLAPLGFDLMSQKPK 702 ++ + + F VV L N DG + L + Sbjct: 770 SIHKSKGLQFPVVFLCNTNGTSKNEANQLVSGADGNIGIDCINNKLKTKQTPLLKTYIRM 829 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYIS 730 + + AL A++KLYI+ Sbjct: 830 SNKEEDVAETLRILYVALTRAKEKLYIT 857 >UniRef50_B1YKM8 ATP-dependent helicase/nuclease subunit A n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=ADDA_EXIS2 Length = 1183 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 75/648 (11%), Positives = 166/648 (25%), Gaps = 148/648 (22%) Query: 382 PQREVEVLHDRLLAMLEEDPTL-------------TPRDIIVMVADIDSYSPFIQAVFGS 428 + E +V+ R++ M+ ++ RDI+++V + VF Sbjct: 519 EELEAQVIATRIIEMVNDENPYLVFDAKQKRFRKCEYRDIVILVRSRGKRVQALVDVFEQ 578 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 LP ++ +SLL D+ ++L P+ F +T+ Sbjct: 579 Y----ELPVYADTTGGYFQATEIQIMMSLLKTIDNPLQDIPFASVLRSPI----FGLTDR 630 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L +R A +++ + Sbjct: 631 DLGRIR-----------------------------------------AKSKDGSFYEAAI 649 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + L + L QL+ WR + + ++ + Sbjct: 650 ---LVAKEQTPLGLRVDEALNQLHHWRTEARGKSLASLIRSLFDQTGYFEYVGCLNGGRS 706 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMP 666 + + Y L L +R + E S V I T+ Sbjct: 707 RQANLNALYERAHQYEASGYRGLYRFLRLIHRLVERGEDFSEARSLGEDEDVVRIMTIHQ 766 Query: 667 MRSIPFKVVCLLGMN----------------------DGVYPRQLAPLGFDLMSQKPKRG 704 + + F V + + D + P + G L + Sbjct: 767 SKGLEFPVTIVSQLGKQFNKQDQIQAIQLHKTYGIALDAIDPVKRLRSGTLLKEVIRREM 826 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 DR + ++ + A+ A++KL + ++ L D + + P D Sbjct: 827 DREMKAEEMRVLYVAMTRAKEKLILVGA---------------IKGLEDQLIKWQDQPLD 871 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 E L + K + + + + + G R S+ L + + Q Sbjct: 872 ELLLPEMDRRNAKTYADWVVPAVLRNFLLSEDGPRWSFRIIALDEIAPYQELTKMVEQLE 931 Query: 825 PFTLPETVPLETLQRF-----WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI-------- 871 + E + + A + +Q+ + +E+ TE Sbjct: 932 HVRVLEKIDHAGDETLNIQIEAAFAYQYPYQVATDTAAKQTVTELKRTEQLERAAFESTH 991 Query: 872 ---------------LEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 L G R + + E + + Sbjct: 992 RQSTYYRTPQFLGPTLTGAERGTVLHLAMQLYESGRSFEE-----QILDWEQAERISSLE 1046 Query: 917 WETQCQEMQ-----------QLADRVIACRQPGQSMEIDLACNGVQIT 953 +T + + QL ++ + + + + + + Sbjct: 1047 AQTMREAIPELTTFLASDTGQLFEQRLLAGEVYRELPFTYKIDSARFR 1094 >UniRef50_C6MIZ6 TonB box domain protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIZ6_9PROT Length = 923 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 110/863 (12%), Positives = 243/863 (28%), Gaps = 152/863 (17%) Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWG 304 + W I + K L R + + E + + L SW Sbjct: 90 QVLWESIILSSEAGKALLRISQTARLVSEAWHLAHAWRLIHRLGDIVPNEDVREFL-SWA 148 Query: 305 KLGRDYIYLLSDLESSQELDA------FVDVTPDNLLHNIQSDILELENRAVAGVNIE-- 356 + ++ L + ++ D F+D+ + + D++ + Sbjct: 149 ETYQNITTLTRQTDQARICDLITEQYEFLDIKKPSRIICYGFDVITPQQILFLKKLSNCG 208 Query: 357 -EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE-DPTLTPRDIIVMVAD 414 E ++ ++I + Q E+ + +E ++ + ++V Sbjct: 209 CEVVIANPTIQWPQSLATIQRFEYTNSQEEIYQAAIWARSKIETVSNSVNSVRVGIVVPA 268 Query: 415 IDSYSPFIQAVFGSA----------PADRYL-PYAISDRRARQSHPVLEAFISLLSLPDS 463 + Y + +F A + + P+ +S A ++P+++ L+L D Sbjct: 269 LMKYRNTLIRIFKEVMHPDIRLALPGAKQNIAPFNVSLGLALTNYPLIDIAFVGLALLDQ 328 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 + + L P LA +E + + + ++ IR P Sbjct: 329 KVEFNRISYWLRSPFLAG----SENEMSQ--RVLLDAQIRR---------FSEPEISLER 373 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR-GLAQER 582 ++R G L L L I+R+ L Q Sbjct: 374 LFILVSRASGGKECPI------------------------LLHCLSVLRIFRQTRLPQSD 409 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEA--AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 + + ++L P +++ + Q Sbjct: 410 SHTVFARIIAEVLQILGFPGERGLDSSEFQTLKKWQMLVANFAALDQVNAKTSYPEAVSR 469 Query: 641 LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 L Q PV I + + F + ++G++D +P + P F + + Sbjct: 470 LRQMAANTLFQPETPNVPVQIIDVFEATGMEFDHLWVMGLSDEQWPLRSHPNPFLPLELQ 529 Query: 701 PKRGDR-----SRRDDDRYLFLEALISAQQKLYISYIGRS-IQDNSERFPSVLVQELIDY 754 K + L L SA+ + +SY S +D E S L++ + Sbjct: 530 RKAKLPWGSTLESSAYCQRLTRNWLSSAKD-VILSYPRYSNDRDGHELKSSPLIRSIP-- 586 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG 814 + ++ L ++ QS E++ + Sbjct: 587 LREAVILDMEQHHERI----------------------------IQSCEMEYIVDCESSP 618 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRL---QVNFRTEDSEIPDTEPFI 871 Q + ++ + A P RA+ + RL ++ + + Sbjct: 619 LGKEMAKQGIKGGT------SVIKDYAACPFRAWAKHRLSITGLDAPHTGLNAAERGLLV 672 Query: 872 LEGLSRYQ-----------INQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQ 920 + L++ I+ L ++E + + + G F +I Sbjct: 673 HQVLAQLWQQLKTKEALDDISDHNLERMLEGITNSVILQMEQYRPIALSGRFAQIEQRRL 732 Query: 921 CQEMQQ-LADRVIACRQPGQSMEID--LACNGVQITGWLPQVQPDGLLRWRPSLLSVAQG 977 + + + L + + E + + + L ++ +W ++ Sbjct: 733 FRLVLEWLVEEKKRSSFRMIAAEEKCLIQIGDLILNARLDRIDELEDGQWIVIDYKTSRK 792 Query: 978 -----------MQLWLEHLVYCASGGNGESRLF-LRKDGEWRFPPLAAE-------QALH 1018 +LV F + K GE F +A E +A Sbjct: 793 SIQSMIGERPDEPQLPLYLVMAGMKQQAAGAAFAVIKRGEMGFMAVAREADLLPGIKAFS 852 Query: 1019 YL---------SQLIEGYREGMS 1032 L LIE +R+ ++ Sbjct: 853 QLEKCTRFNTWEDLIEAWRQSLT 875 >UniRef50_A1VQ25 UvrD/REP helicase n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VQ25_POLNA Length = 1141 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 74/607 (12%), Positives = 161/607 (26%), Gaps = 121/607 (19%) Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 D R+ ++ A S + R +P + + P ++ ++LL Sbjct: 556 RDAGTAYREQALLCASNARLSEIAEG-----LEARGIP--VLHLGSLFERPEIKDLLALL 608 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 S+ + + V A +++ + + + + + ES + +D Sbjct: 609 SMLNDPYAVGLVRA-----STMPSYELPLQDIAQIIERLRESKV-AALDWRLAGNWP--- 659 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 E +G + +A+L ++ Sbjct: 660 --------------------------------PELAGTSNATLARVAALFDGMSPTGNPW 687 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 L W+ + +L D L Q+ + L Sbjct: 688 TI---LSTWVIDRLGLAKVLYLADDAQSRMKGLALWQFLNFCRQQPSGAGAPCTRLLDRI 744 Query: 639 DELAQRLDQERISQRFLA----GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL----- 689 L + + V + T+ + + F V + GM PR Sbjct: 745 RRLVLLSEDRGLRHLPGVVDGIDAVRLMTIHASKGLEFHTVHIPGMVTSGLPRNNMAPRC 804 Query: 690 -APLGFDLMSQ---KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 P G S + +++ LF AL A+ +L++ Y D R PS Sbjct: 805 VPPDGLIHGSDGITGLEAVKSGHEEEEECLFFVALSRARDRLFL-YASSVQSDGRARNPS 863 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 + + + S P ++ R KA L + P Sbjct: 864 KFLTSIRHLLIHSPNPPQ------RSAKLRAKACLQVAWAQKPVWTD------------- 904 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 + F P R F+ L++ R ++ Sbjct: 905 -----------------------------SQVNLFARCPRRFFYTHVLKLGGRRTETAFM 935 Query: 866 DTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 + + + ++ E + R + ++ G + +G E + + + Sbjct: 936 KMHNVVGDVFDWLKTTHEM-TVPTEAELGARFDQAWQVKGAIDHGY-AEDYRRIARRLVD 993 Query: 926 QLAD-RVIACRQPGQSMEIDLACNGVQIT-GWLPQVQPDGLLRWRPSLLSVA----QGMQ 979 L + R P + + + + + + ++ R ++ Sbjct: 994 YLIETRSRGVLAPATPISLGWVEGEILVRPDSVARGDKGQIVVRRVKTGKPRSNAFDDIE 1053 Query: 980 LWLEHLV 986 L HL Sbjct: 1054 YTLLHLA 1060 >UniRef50_Q82SW8 Putative uncharacterized protein n=1 Tax=Nitrosomonas europaea RepID=Q82SW8_NITEU Length = 909 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 94/662 (14%), Positives = 176/662 (26%), Gaps = 140/662 (21%) Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 S L I C + E+ + LEE+P I ++V ++ + Sbjct: 217 SLQWLQLSGQPDRIGKLACADGRDEIRQAARWIRQRLEENPAAR---IALVVPELAAQRE 273 Query: 421 FIQAVFGSAPADRYL-P--------YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 I + L P Y +S + +P + + +L L ++ V Sbjct: 274 MICQTLDEVLIPQALQPEHHDRVRSYNLSLGKPLDRYPPVSLALDVLGLSETVIELPHVS 333 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +L +A + + L+ W L ++ Sbjct: 334 RVLRSSFIAG----GDREMNA------------------RALLDARLRESGEWNLTLQKL 371 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 L A LA L L + EW Sbjct: 372 LTNAARSGQPYSCPL-----------------LAECLSNLMKQVKVSLAPTSPGEWAQRF 414 Query: 592 RDMLNAFFLPDAETEAAMT-LIEQQWQAIIAEGLGAQYG-DAVPLSLLRDELAQRLDQER 649 L A P ++ + Q WQ ++ E + +V L+ +L + Sbjct: 415 GQWLKAIGWPGERGLSSEEYQVIQAWQGVLREFSTLDWVIRSVSLTEALQQLRHMVAGTI 474 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 PV + L + F + ++G++DGV+P P F ++ + + Sbjct: 475 FQPESAEAPVQVLGLFETSGLQFDYLWIMGLHDGVFPASSRPNPFLPLTLQREVDAPHSS 534 Query: 710 D-DDRYLFLEALIS----AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 + + L A + + ISY R + + S L+ + + Sbjct: 535 ARRELRVAAALLQRITTNATE-VVISYPQR--KGDEILDSSPLIDAFPALSEEMLAMGTQ 591 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 ++ S +E L A + + Sbjct: 592 ---------------------------SAWRDSVYHSRQQEVL----SEDVAPTFVGTGI 620 Query: 825 PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL 884 P + A P RAF ++RL L L R + ++ Sbjct: 621 PGGSKL------FKLQAACPFRAFAELRLVARPLGRIQ-------IGLNALVRGTLLHRV 667 Query: 885 ---------------------LNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQE 923 LNALV E ++ FGE + + Sbjct: 668 MEMVWAELDSLAALANLSPGELNALVAGKVNEAIYEIAPRY----PHTFGERLQALESKR 723 Query: 924 MQQLADRVIACRQPGQSMEI-------DLACNGVQIT---GWLPQVQPDGLLRWRPSLLS 973 + L + + + +L NG++I + ++ G L Sbjct: 724 LHALVLAWLEMEKQRPPFRVSGREMETELELNGLRINLRIDRIDTLEEGGELLIDYKTGE 783 Query: 974 VA 975 V Sbjct: 784 VK 785 >UniRef50_C6LEN7 ATP-dependent helicase PcrA n=2 Tax=Clostridiales RepID=C6LEN7_9FIRM Length = 604 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 62/469 (13%), Positives = 134/469 (28%), Gaps = 107/469 (22%) Query: 305 KLGRDYIYLLSD--------LESSQELDAFVDVTPDNLLH----NIQSDILELENRAVAG 352 +L D I LL+ + Q + F P+ +L+ Q+ L L+ Sbjct: 217 RLQYDIIKLLAAPENNLFVVGDDDQSIYRFRGAKPEIMLNFPKDYPQARQLLLDRNFRCP 276 Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCH----------SPQREVEVLHDRLLAMLEEDPT 402 N+ + + R + I + ++E + R+ L + Sbjct: 277 GNVCDLAARVISRNTVRYEKKIEKVKADGLPVEKLLFRNQEQESLGIIQRIRQGLAQ--G 334 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA-RQSHPVLEAFISLLSLP 461 D V+ V + +P+ + D H + I+ L L Sbjct: 335 RRYEDFAVLYRSNTDAG-----VLSQKLLEYNVPFKMRDTLPNLFEHWISRQVIAYLKLA 389 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 + +VL +++ + I L Sbjct: 390 HGDYSCANVLKIIN----RPKRYIERSCLD------------------------------ 415 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 T + R+ + Y W + + +L LA+ Sbjct: 416 -TQQVDFERLRMYY----EDKYW-------------------VIRRIDKLEQDLAALARM 451 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAM--TLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 +P + + +L + + + + + Y + Sbjct: 452 QPYAAVQYIRHGIGYEQYLEEYAEYRKIKAEDLYEVLDRLAQSAK--GYETCEAWFAYME 509 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 E ++ L ++ + V + TL + + F V L+ +N+G+ P + A L D+ Sbjct: 510 EYSEMLKEQAKNGAQKQDCVTLTTLHSAKGLEFPFVFLIDVNEGIIPYKKALLASDV--- 566 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 +++R +F + A ++L I + PS + Sbjct: 567 ----------EEERRMFYVGITRASEQLTI--CVLKEKYGKSLKPSPFL 603 >UniRef50_C1A6C2 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6C2_GEMAT Length = 702 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 59/499 (11%), Positives = 129/499 (25%), Gaps = 85/499 (17%) Query: 256 YLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLS 315 + L ++D R + D + A G R+ + Sbjct: 238 QIRALYDHVLVDEYQDTNPLQSRILRGLCTNGHITVVGDDAQSIYAFRGATIRNILDFPH 297 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSIT 375 + ++ + + IL+ N ++ + R +T Sbjct: 298 EFPGTRIVTLEQNYRST-------PHILDSTNVLISRSMERYSKQLFTARTDGERPWLVT 350 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 + + DRLL + E+ R++ V+ + ++ A ++R + Sbjct: 351 VR---DESAQTAFVVDRLLELHEQ--GTPLREMAVLFR-----AGYLSADLEIELSNRRI 400 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY ++ ++ + L ++ LL + + + R + Sbjct: 401 PYEKWGGLKFLEAAHIKDILAFVRLLENPRDEVSWYRLLRLLP-----GVGDATARNAIE 455 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 +N+ G G +D Sbjct: 456 LLNQHGWAPMAIGAVKAPARA-----------------------KPGLLAMAALFDGMGR 492 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 + + E + + R + + + Q Sbjct: 493 V-------------------ERADRPHSPSETIRLVRQLYDPLLNATYDDAPPRLADLDQ 533 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 L+ L E I + + T+ + + V Sbjct: 534 L----EIIAAGYTDRTEFLAALALEPPSSTQDLAIGSTDEDDALILSTVHSAKGKEWDAV 589 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI-----S 730 ++ +DGV+P A D ++ +++R L AL A+ LY+ S Sbjct: 590 FVIHASDGVFPMARA------------AVDDAQIEEERRLLYVALTRARNDLYVVYPLHS 637 Query: 731 YIGRSIQDNSERFPSVLVQ 749 Y R+ D S S + Sbjct: 638 YATRTGADFSYTQLSRFLD 656 >UniRef50_Q6CK19 KLLA0F14256p n=1 Tax=Kluyveromyces lactis RepID=Q6CK19_KLULA Length = 966 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 68/511 (13%), Positives = 150/511 (29%), Gaps = 91/511 (17%) Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 I L+ + S+Q L F + I++ I RA N++ F + Sbjct: 290 ISLIDNYRSAQTLLDFSEKVIG---QQIKNRIKRDPLRAQFNHNVKPFYSYFQRTDTFEN 346 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 E L +L + D+ +++ A Sbjct: 347 -------------SESNSLAHEILYLKSLPGLFKFSDVAILLRTRRQVYDI-----EKAL 388 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 +PY I + + F+ L + S +L L A I + Sbjct: 389 IKNRIPYRIVNAKGVWEKKESGIFLDYLRIISQDSCSLAILRCLQ----FASNGIGSTTI 444 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 R ++ ++ R ++ Q + L ++ E+ Y Sbjct: 445 RKIKSAFDKDRCRNSLEVLKELCESNDLNNQKISAALKRFINLVEKLKLKCEEYD---TY 501 Query: 551 DESSGLIAEL--VGHLASLLMQLNIWRRGLAQERPLEEWLP----VCRDMLNAFFLPDAE 604 D L AE+ +G L S+L ++R L+E+L + F + + Sbjct: 502 DGLKELFAEIYMLGELYSVLKISKETINEQIKDRSLKEFLQTEHQNMFKVYELFTEYELD 561 Query: 605 TEAAMTLIEQQWQAI--IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP---- 658 +I++ +A + + + + + + Sbjct: 562 QNDEHIMIQENAADPNDLALIKENFNSNDLNFFEVITFFTKSISLYSSEEENTENSLDKL 621 Query: 659 -------VNICTLMPMRSIPFKVVCLLGMNDGVYP--RQLAPLGFDLMSQKPKRGD---- 705 V + T+ + + + VV + +N+G+ P Q A + +++ + G+ Sbjct: 622 ANHLQERVTVSTIHAAKGLEWPVVFIPSINEGLIPFTEQSARQRLEDLAELRRDGEACND 681 Query: 706 -----------------------------RSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 + +++R +F AL A+ LY+S G+ Sbjct: 682 LNNCSMGSGEFDNIKEELRGKESDLIDDLETTLNEERRIFFVALTRAKDLLYLSSSGK-- 739 Query: 737 QDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 S+ ++ + +++ Sbjct: 740 -------KSIFLKNCEQLYSNNVLFNNPQSI 763 >UniRef50_A6BJ96 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A6BJ96_9FIRM Length = 1221 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 53/397 (13%), Positives = 107/397 (26%), Gaps = 91/397 (22%) Query: 380 HSPQR-EVEVLHDRLLAMLEEDP----------TLTPRDIIVMVADIDSYSPFIQAVFGS 428 S + E ++ R+ +L + DI+++ I ++ VF Sbjct: 539 PSERELEARMIAMRIRELLRSQKVTDKETGELRNVRYSDIVILTRSIKGFAD----VFTE 594 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 +P + + L + D+R + A+L +++E Sbjct: 595 VLNREGIPTYAGTSEGYFQTQEIGVLMDYLRVLDNRRQDIPLTAVLSSAF----AGLSQE 650 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L +R A ++SV Sbjct: 651 ELAEIR----------------------------------------CAYPDTA-FFESVT 669 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETE 606 Y E G A++ L L Q++ +R+ + P+ E L + + Sbjct: 670 KYRE-QGENADIQLKLQKCLDQMDDFRK-IVPYTPMHELLWKILETTGYGDYVASMPGGA 727 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL--AGPVNICTL 664 + Y ++L + + A V + T+ Sbjct: 728 QRKANL-DMLIEKARAYESTSYKGLFHFVRYIEQLQKYDVDYGEASIEDEHADTVRVMTI 786 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK-----------------------P 701 + + F VV + GM + Q A L + Sbjct: 787 HKSKGLEFPVVIVAGMG-KRFNMQDARSAVALHAGMGVGLDAVNLEYRTKIPSIIKKVIQ 845 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 K ++ + AL A++KL I+ + +D Sbjct: 846 KEEALESLGEELRVLYVALTRAKEKLIITGTLSNPED 882 >UniRef50_Q88U41 ATP-dependent helicase/nuclease subunit A n=3 Tax=Lactobacillus plantarum RepID=ADDA_LACPL Length = 1249 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 54/486 (11%), Positives = 132/486 (27%), Gaps = 91/486 (18%) Query: 386 VEVLHDRLLAMLEEDPTL-----------TPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + ++ ++LA+ +D + D+ ++V + I + Sbjct: 560 ITMVAQKILALKAQDKPIYERANGEYRPFRYSDVALLVPTRNHNLTII-----DVFKRYH 614 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P ++D + + ++LLS+ D+ + ++A+L P++ + E L YLR Sbjct: 615 IPVVVNDAQNYFQTTEIRIMMALLSIIDNPYQDIPLVAVLRSPIV----GLDENQLVYLR 670 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + + Y A V Sbjct: 671 ----------------------IQNKTSDYFQAVQDFYHHYPTGPATEYGDQVYA----- 703 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEE-WLPVCRDMLNAFFLPDAETEAAMTLIE 613 + + L QL +R + + + W R + + + Sbjct: 704 --------KIETFLTQLTEFRDLARRNQIVTLIWQIYERTGFLDYVGGMPAGKQRQANL- 754 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS-QRFLAGPVNICTLMPMRSIPF 672 + + ++ + A VN+ T+ + + + Sbjct: 755 HALYERAYTYEQGSFKGLFQFVRFIRRMQEKDQDLAAAVAETDAEAVNVMTIHGSKGLEY 814 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQK-----------------------PKRGDRSRR 709 V+ ++ M D + + L + + + R Sbjct: 815 PVIFVMDM-DKQFNQTDTRSSALLDREAGIGITYLDPETRVKYPTLPQVVTKQVVSKKMR 873 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 ++ A+ AQQ+LY+ + I +E+ + +A Sbjct: 874 AEEMRKLYVAMTRAQQQLYLVGTIKDIDTATEK--------WRQAFASDGRVLSAQARIA 925 Query: 770 DESEARVKAHLTCLHT-RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 ++ H + + E + A +E + + T Sbjct: 926 ATNQLDWVGMAVMRHPAMKAYWGDEWPNYELTDDPTKLAVELGDATTVLAEQSEAVTDTQ 985 Query: 829 PETVPL 834 P+ + L Sbjct: 986 PDALEL 991 >UniRef50_C7R1Q7 UvrD/REP helicase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R1Q7_JONDD Length = 1059 Score = 136 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 97/869 (11%), Positives = 217/869 (24%), Gaps = 131/869 (15%) Query: 142 RPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESAT 201 RPDW A + + + E + Q + + A + + L Sbjct: 182 RPDWCAAAQVLAEYDTVVELSSMQPDVGRR------------DDPARIVSSAADILSHWD 229 Query: 202 TCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWG-DIKDPAYLAKL 260 T V + + + LQ L + ++ +P G P +L + Sbjct: 230 TGGRPTYDLVIVDDAQEMTAATVALLQVLHRDGARIVMAGDPDMTVQGFRGASPRHLNQA 289 Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESS 320 + E + +AS G + +S Sbjct: 290 TFPRTAPGGFAAERLTLSTVWRSHPAV--RERVREVTSAIASAGIVA-------HRRATS 340 Query: 321 QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCH 380 + ++ D + + + H+ Sbjct: 341 RHVNRAQDPQA--------------------------SPPDEKPTTVSRTQPGVEAHLAP 374 Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 S E + + L D + + V+ +Q + A +P + Sbjct: 375 SIHVETSAIVNTLRHW-HIDEAIAWSSMAVIARSTA----HLQRI-RRALERAQVPVTVL 428 Query: 441 D-RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 A + P + + +L+L R + D+ +L V + + G+R LR+ + Sbjct: 429 GTDVALRDEPAVRGLLDVLALA--RDDTIDLDLVLRV-LQGVYGGLDSLGIRQLRRHLRS 485 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 + +R + +L+ + P+ + A Sbjct: 486 AELRQDGARTS------------------DELLIDLMATIRDHGHHDIPPHH----VAAA 523 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWL-----PVCRDMLNAFFLPDAETEAAMTLIEQ 614 +G L +++ +G + W V + + A ++ Sbjct: 524 AIGRLTAMIQAACTVMQGHTHDAQTALWAVWDAAQVAPTWRHIALSDSPASGRAHDDLDA 583 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERISQRFLAGPVN-ICTLMPMRSIPF 672 + + + + L + ++ R + V + T + Sbjct: 584 VMALFRSAETHVDRMPDPSVESFIAFIEAQDLPADSLAIRNQSDHVVSLLTPQAAAGRQW 643 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQ---------------KPKRGDRSRRDDDRYLFL 717 + V + + DG++P + D+ F Sbjct: 644 QRVIITALQDGIWPNLTLRDSLLGSLHLVDILTGRASEDGGPRDSAARTDILHDELRSFA 703 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 +L AQ+ + ++ D+ E+ PS + L + L + S Sbjct: 704 LSLSRAQEHVMLT-----AVDDDEQSPSPFLH-LAAPQPRPITLGDESGPLDMRSVTTAA 757 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK----AHSEFVQPLPFTLPETVP 833 Q +Q + PA+ S + + Sbjct: 758 RAALHQALLREDAEQAHQLASLLAAMEPHTPASDPHTWYQAHPVSTTLPLFHELTTLPLS 817 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD 893 + +R E +P S + + Sbjct: 818 PSRVDVAQTCSLRWAL-------------ETSGGQPASGLSQSVGTLIHDVAAHAPMGTI 864 Query: 894 AE--RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSM----EIDLAC 947 + +L +LP G + + +LA R + + Sbjct: 865 TQFTQLLDERWDQLNLPPGWPAQRLRSQAQTMVGKLAQYTSMVRDDVVEVLVEHPFTVEI 924 Query: 948 NGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 G +I+G + +V+ R L + Sbjct: 925 AGARISGSIDRVEILRSGDARIVDLKTGR 953 >UniRef50_C4LK53 Putative ATP-dependent DNA helicase II n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LK53_CORK4 Length = 1226 Score = 136 bits (341), Expect = 8e-30, Method: Composition-based stats. Identities = 117/937 (12%), Positives = 224/937 (23%), Gaps = 193/937 (20%) Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD---YIYLL 314 T +H+F D E G + G VG+P+ + +G G L Sbjct: 299 EYQDTNYAQHAFLSSLFGSQSDLEEKGSVDKPVGVTAVGDPMQSIYGFRGASPGNLYQFL 358 Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSD-ILELENRAVAGV---------NIEEFSRSDNK 364 D Q D +LEL N + + S Sbjct: 359 DDFPRYQGGVLVPCEKRALSQSFRNPDEVLELANAISHDALSGGEGCGFDAVDADSSALA 418 Query: 365 RPLDPLDSS----ITFHVCHSPQREVEVLHD-------RLLAMLEEDPTLTPRDIIVMVA 413 L ++ + EVE + D + + P ++V Sbjct: 419 PTLSSGKKGSAGVVSVKWALDERDEVEWVADVFEQEYRSAMQNKSQGEPTKPFTGAILVR 478 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 D +P F A R +P +S + P + +S+L + E L + Sbjct: 479 KNDHITP-----FAEALMKRGIPVGMS-PDSLDDIPEVREVLSVLRVVVDPSDDEATLEV 532 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 L P R+ + ++ L + + + + L Sbjct: 533 LSSP----RWRMGTRDIKTLSNRAKDLARGSDNQSGTRKSKHKEIDSIEVFEEKANELEL 588 Query: 534 -----GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 ++ A + S E L +L +L W R + PL + L Sbjct: 589 PGDGTEVSLADAIADLGISSDQGNKSAFSNEGRMRLQALSAELR-WLRRQSMTVPLPDLL 647 Query: 589 PVCRDML----NAFFLPDAETEAAMTLI-EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 L D + A I + + + + + L Sbjct: 648 AQIESTLSIRTEVLARQDPSEDGAAGTIHLDRLRDVAEDFTAHGG----STQEFLEYLRA 703 Query: 644 RLDQERISQRFL-----AGPVNICTLMPMRSIPFKVVCLLGMNDGVY------------- 685 + + + V I T+ + + + VV + +D Y Sbjct: 704 ADEAPGTTIEAGEVSVHSDQVQILTVHSAKGLEWDVVAVPFCDDSTYNSPDLSSGSKQKK 763 Query: 686 -------------------------PRQL-APLGFDLMSQKPKRGDRSRRDDDR------ 713 PR PLGF + + + ++ Sbjct: 764 GKKKGNWTGTWLRSSKILPSALRGDPRSPANPLGFPVFKDTELATWKDIQSAEKEYKKEI 823 Query: 714 ---------YLFLEALISAQQKLYISYIGRSIQDNSERFPS-VL---------------- 747 +LF A+ + ++L +S + + S Sbjct: 824 QSVDIRDSDFLFYVAITRSARRLLVSGHSVNPASKNYLQKSHRFFQVQNIVAGKLGIDVN 883 Query: 748 --VQELID-YIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 +EL + + + + + + P P + R Sbjct: 884 ARFEELQATHAEEPLRITAHSGGDHPTWNLDLTEPPLETVSDEPQSEAPIWPSDPLGERR 943 Query: 805 EWLPAASQAGKAHSEFVQPLPFTLPETVPL---------------ETLQRFWAHPVRAFF 849 E + A++ +A E ++ + L A+ Sbjct: 944 EAVDKAAELVRAAMEDLKAESADPGKGYTPQADPGTLAATWENETTALIEEAR---AAYV 1000 Query: 850 QM-----RLQVNFRTEDSEIPDTEPFILEGLS-----------RYQINQQLLNALVEQD- 892 L++ D E F R L A + Sbjct: 1001 SHTDVPLGLELTTSEMMLASADPEAFARRRARPVPFKPNPYAKRGTAFHNWLEAELGGAS 1060 Query: 893 ---DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG 949 D + L + D + + + + L G Sbjct: 1061 ALIDDDELLGAMEDSDD--DIPISQPELDHLKKAFMK--SPWAGKTAWDVERPFTLNLGG 1116 Query: 950 VQITGWLPQVQ--------PDGLLRWRPSLLSVAQGMQLWLEHLVY--------CASGGN 993 I G + + ++ W+ Q M+ L A G Sbjct: 1117 YFIRGRMDAIFKSEKNGTPEWFIVDWKTGKKPTGQDMKRAEIQLAMYKEALRRQLADTGT 1176 Query: 994 GESR-----LFLRKDGEWRFPPLAAEQ--ALHYLSQL 1023 + ++R + + L + A LS L Sbjct: 1177 PNATIRAAFHYVRLNETYEPTDLPSPDELAQSVLSTL 1213 >UniRef50_B1XR07 Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XR07_SYNP2 Length = 889 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 73/673 (10%), Positives = 177/673 (26%), Gaps = 101/673 (15%) Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD--NKRPLDP 369 L L + F L+ +Q +L++ + + + + ++ Sbjct: 176 DSLLYLPQVDDQPLFSPQAE--LIKRLQGKGWQLDDSQPETLTLGDRLSQKFFGQNSVNF 233 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 ++ HV + + E ++ +L++ + R I ++ + + + P + V Sbjct: 234 EPKTVQAHVYPNWEAEARGTLGQIKQLLQQ--GVAARKIAIVTNEDNHWGPLLLHVAQEY 291 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 LP IS Q + LL++ ++ + E L P+ Sbjct: 292 DVPLSLPNPIS----LQKTRLGAWLEQLLTVIETNYSFEVTAQWLSHPLTHPLG------ 341 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 R++ + + ++ + + W + Sbjct: 342 ----REFWQAA---RTLKPNHFEAWQALTQEHYQWDLAV--------------------- 373 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 L G L L R W+ A Sbjct: 374 ------LQPPQQGSFLVWREYLKEILNVLKVRRRALPWVT---------------ETVAY 412 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + ++ G + + + + E+ L + G V + + Sbjct: 413 KKLIDGLDSL-----GTSLTETMTWEMFQAEIRTSLQLLTTPAYPMRGGVGVHNPQNLIG 467 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD-------DDRYLFLEALIS 722 + + + +GV PR L + + D+ + +++ F L Sbjct: 468 AQYDYIFCIDGAEGVMPRPLRDEPVLDFYTRKQLSDKLPIEGAIAKARREQFQFYSLLQV 527 Query: 723 AQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 Q++ SY + + S+ + P ++ S A + Sbjct: 528 PQKQFTFSYSTLGQGEGRYRSQVASIY-------FKKLGLQPKKTSIAIAASVAEARQFY 580 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 ++ E A + + T L + Sbjct: 581 LTQSQIPTELQSETLDQAIAAHQIEQRRLQKSALDEYQGLIGVPFPWREHTFSASQLLQL 640 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL-FR 899 P + F L++ E + G+ +++ + LNA E D + F Sbjct: 641 GQCPFKWFAGKVLKLAALDEPETTLEP---SQRGILYHKVLELALNAYRENPDLDLTDFE 697 Query: 900 RFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME-----------IDLACN 948 + +A ++ + + + + I Sbjct: 698 QLKAWFIEAEDVLKLPELSAWERQCTEHIQTLQRAIAAPEFLPEGRHVFRLEDKIQFTWQ 757 Query: 949 GVQITGWLPQVQP 961 +ITG++ ++ Sbjct: 758 DFRITGYIDRIDQ 770 >UniRef50_C7RGF9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7RGF9_ANAPD Length = 1121 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 81/799 (10%), Positives = 213/799 (26%), Gaps = 136/799 (17%) Query: 250 DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD 309 DI++ + + F++ + + +L D VG+ + +G + Sbjct: 363 DIEEARNKLRETYKY--IFFDEYQDSNEIQNYIIEKLKGEDNLFFVGDVKQSIYGFRRAE 420 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-----RAVAGVNIEEFSRSDNK 364 L LE+ + D V + + Q D+L+ +N + ++ ++ Sbjct: 421 PKLFLEKLEAYDKDDKSVRIDLN-KNFRSQKDVLDFDNFIFDRLMTKEESDIDYRDGGHR 479 Query: 365 RPLDPLDSS------ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 + + S I S RE + L + + RDI +++ Sbjct: 480 LNFNKNEQSAYERANIKVI--DSKIREEDYLAKLIEEI--RAMGYDYRDIAILLRSGGK- 534 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 V+ A +P+ + + FI+LL + +L+LL + Sbjct: 535 ----SYVYEEAFKKAEIPFFNDISKVSFRAVEVTFFINLLKYLANPKDDLTLLSLLRSEI 590 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 FD E+ L +R + D+ + E + F Sbjct: 591 ----FDFDEDDLVEIRLSSDSYSFTKAFDEYDKDEEIVEKINDFKTIFA----------- 635 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 +++L E + + E G + L + + ++ Sbjct: 636 -DLTYVKNLLSLYEFANYVFEKTG-----------FYEYLLARDRASDRINNVESFID-- 681 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ---ERISQRFL 655 I+ E D L+ Sbjct: 682 --------------------IMDEYDRTNDNGLFGFLEFVDSLSINQSDNIQTTRELSEA 721 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK------------- 702 V I T+ + + F VV L + + Sbjct: 722 EDLVRIMTIHKSKGLEFPVVILADCG-KRFNNKHLREPIVFDDDLGIGINLSDYENKLRF 780 Query: 703 ----------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS------ERFPSV 746 + + + ++ + A+ A++ L+I+ S Sbjct: 781 SSLRKNLINDKITKENKKEEMRILYVAMTRAEEMLFITGERNLKTVGRLKGRIDFLNMST 840 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW 806 + ++ + + + + + + A L + P D + + + Sbjct: 841 YMDWILSILSRD-KVSEELFEEYETNALDGLASLEVIEESDPIDKFESKDITDFLKSEDV 899 Query: 807 LPAASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 K + P E++ + + + + + + ++ E+ Sbjct: 900 NQEIYNKLKQIFDSPYPYEDQTRESIKRSVTEISKDFDPSLDGY-----RLPNYEENELA 954 Query: 865 PD-------TEPFILEGLSRYQINQQLLNAL---------VEQDDAERLFRRFRAAGDLP 908 D E + + + ++ AL ++++ + + L Sbjct: 955 GDFRKANFIREEKSYKATDKGTMIHRIFQALDFKDYDKVSLKEEIDRLIREKRIEEDSLD 1014 Query: 909 YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGL---- 964 +I + ++ ++ + R+ + + + G + + Sbjct: 1015 LVDLDKILGFFEDPFIKDISQKATNIRKEESFL---MTYEDYYVNGQIDLIFEIDDKVIL 1071 Query: 965 LRWRPSLLSVAQGMQLWLE 983 + ++ + ++ Sbjct: 1072 IDFKTDRTKRENLYKKQIQ 1090 >UniRef50_C7GZ83 Putative ATP-dependent exoDNAse beta subunit n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ83_9FIRM Length = 1289 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 53/422 (12%), Positives = 119/422 (28%), Gaps = 62/422 (14%) Query: 385 EVEVLHDRLLAMLEED---------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 E ++ + A + + L DI V+ I I+ A + Sbjct: 539 EGLLIGSEIKAAIGREYFDAKEGVQKKLKFSDIAVLFRSIKGRGKKIK----LALELLGI 594 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 P + + +L L + + ++ +L PV + T + + +R Sbjct: 595 PTNMQASGDILDFKEVNLLHCILKLTANFYDDLSLVTVLLSPV----YGFTPQDIAEIRI 650 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 W +E+G + G A+++ Sbjct: 651 WGDENGYKAQPFYACFLAFSKNLCRDDDAGENGETNGNGDALKNEDC------------- 697 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLIE 613 EL + + +R L ++ + F ++ IE Sbjct: 698 ---ELFVKARDFVNDILRFR-SYGYALSLHVFIKRVCTETGIYEFAEALKQSRNPCGNIE 753 Query: 614 QQWQAIIAEGLGAQYGDAVP-LSLLRDEL--AQRLDQERISQRFLAGPVNICTLMPMRSI 670 + E + + L L ++L + ++ + V+I T+ + + Sbjct: 754 RYI-DFAHEFERERGIATLSDLLLYIEDLYKNELAIEQEEREGENTNAVSIMTIHRSKGL 812 Query: 671 PFKVVCLLGM-----------------NDGVYPRQLAPLGFDLMSQKPKR----GDRSRR 709 F +V + G N G++ R + G + + + Sbjct: 813 EFPMVVVAGCGSNFVKTKSASYIEFDKNHGMFMRYMGADGLVGIPHREILHKYAEKDAEY 872 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 D+ +F A A+ L S + S S + D + + + ++ Sbjct: 873 DEAMRIFYVACTRAKDFLVFS-AVTDGKKGSIITYSSFYDVINDTLVCNEEINKEKWFEY 931 Query: 770 DE 771 +E Sbjct: 932 EE 933 >UniRef50_Q1Q4K9 Similar to ATP-dependent DNA helicase subunit AddA n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4K9_9BACT Length = 1198 Score = 135 bits (340), Expect = 9e-30, Method: Composition-based stats. Identities = 57/626 (9%), Positives = 168/626 (26%), Gaps = 129/626 (20%) Query: 387 EVLHDRLLAMLEEDPT------------LTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + + + + D L +DI +++ P++++ + Sbjct: 561 DWIAKWIKNNVFYDNGGDTSADAATSYKLKYKDIALLLRSFTQIRPYVES-----FKEHD 615 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P+ + + + F++LL ++ + + ++ L P +T+ + L Sbjct: 616 IPFIAEGEKYFYTTQEVIDFMNLLRTIENPYDTIALVGTLRSPF----AGLTDNEIYLL- 670 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 ++ Sbjct: 671 --------------------------------------------KINDLLDYRKTISDNI 686 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 + A +G S L + N+ R + + E + + F + Sbjct: 687 DIDA-TIGDFYSFLRKYNVRSRIIPVSHLISEIIN------DPRFAGITASAWQGEQKLA 739 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-----GPVNICTLMPMRS 669 + + + L + + + +D+ R V I T+ + Sbjct: 740 NLKKFYRTACKLEQIQGISLKHFINNMKKYIDEAREEGESPLSDETLDVVKILTIHKSKG 799 Query: 670 IPFKVVCLLGM-------NDGV----YPRQLAPLGFDLMSQKPKRGDRSRR--------- 709 + F VV L + N+ + + + G L + + + Sbjct: 800 LEFPVVILGNLHGEAKKENETLDSVAFDWNTSTTGIVLGKGEQQLRNLQSIILENKINER 859 Query: 710 --DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 ++++ + A+ A+++L ++ + + ++ + ++ + + Sbjct: 860 TWEEEKRVLYVAMTRAKERLILTGALKDNDK-------SYIGLIMKSLSDAYDISLNNEP 912 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT 827 R F+ + ++ + W + + ++ Q + Sbjct: 913 ETPSGHVRKIVFGNSEIFLENFNYTGARRFVSKTAEKTWDIDWNSFVRIWNDRKQSMFAE 972 Query: 828 LPETV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL 885 + + L + PV T + I E + + Q+L Sbjct: 973 TEKPLFTSPSALSEEIS-PVHY--------ETPTHNKHINSAEIQQEYAAAIGSLCHQIL 1023 Query: 886 NALVEQDDAERLFRRFRAAGDLP------YGAFGEIFWETQCQEMQQL-----ADRVIAC 934 Q + L+ ++ + + + + + + Sbjct: 1024 EKWDFQGTLQALYDLITSSVTIHFTNASLHHTIIHLIKTEAVTILTAFFHSKAYNELKNA 1083 Query: 935 RQPGQSMEIDLACNGVQITGWLPQVQ 960 R G+ + I L G + G + + Sbjct: 1084 RILGREIPILLHWEGQIMRGTIDIIY 1109 >UniRef50_C8Q3Z5 UvrD/REP helicase n=2 Tax=Proteobacteria RepID=C8Q3Z5_9ENTR Length = 1144 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 83/642 (12%), Positives = 179/642 (27%), Gaps = 123/642 (19%) Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 L D + M RD V+ + + G +P + Sbjct: 542 ALADAIQEM--RGAGYPYRDQAVLCTGNEKL-----SEIGQQLERLGIPVLFLG--SVFE 592 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID 507 P ++ ++SLLSL R + ++ + F ++ E + + + E D Sbjct: 593 RPEIKDWLSLLSLLVDR-RAMGLVRM----ACLPEFTMSLEDVGNILACLREEDDWG--D 645 Query: 508 DDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567 + + T L + L G+ +++ + + D + Sbjct: 646 WRDKVNQFQISANGRTALKRLIKTLDGFKGDTSPWTVLATVLLDR------------TRI 693 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 + +L + + + W +LN + + E I + I Sbjct: 694 VARLATSSGCSDRSQCIATW-----QLLNFLRVQPSTGEGLF--ITRTLDRIRRLVRLGD 746 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP- 686 D L ++ + V + T+ + + F VV + GMN P Sbjct: 747 DRDLRQLPVVAQSI---------------DAVRLMTIHGSKGLEFPVVHVPGMNADTLPG 791 Query: 687 --RQLAPLGFDLMSQKPKRGDRSR-----RDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 ++ A D M K R + + + LF AL A+ +L++ Y Sbjct: 792 YTQKQACPPPDGMIAGSKANAREQFSLEHKAERECLFYVALSRARDQLFL-YAALRNAAG 850 Query: 740 SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER 799 S R S + + + Q + P + ES P ++ Sbjct: 851 STRRKSEYLDRIEPNLIQRNIEPHHPVIEPPESL-----------------PIDWVADGE 893 Query: 800 QSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRT 859 + + + + + P R F+ LQ+ R Sbjct: 894 F------------------------------KLSGDQVSLYESCPRRFFYTHVLQIGGRR 923 Query: 860 EDSEIPDTEPFILEGLSRYQINQQLLNAL--VEQDDAERLFRRFRAAGDLPYGAFGEIFW 917 + PF + ++ + ++ A + + + + + G +G + Sbjct: 924 SPT------PFSKMHDAVRKVFRDMIEAESTIITNIEGSVEQALKVEGLAEHGY--APEF 975 Query: 918 ETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQG 977 ++ +M + + + P + + + IT V R + Sbjct: 976 KSLALDMVRYFNSIREGHAPETPSVLTMKFGDIPITVQPDDVLIYSDGRRTFRRVRTGHK 1035 Query: 978 MQ-------LWLEHLVYCASGGNGESRLFLRKDGEWRFPPLA 1012 L + + L D L+ Sbjct: 1036 RDKEESDLGAAAFILAARRAFPDAIVELVHLSDKTVTPIDLS 1077 >UniRef50_A6LK37 Putative uncharacterized protein n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LK37_THEM4 Length = 966 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 70/670 (10%), Positives = 188/670 (28%), Gaps = 92/670 (13%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 +LE+ +K D + + E+ + ++ ++++ Sbjct: 238 RAFYQLEDIYSFLEQENFSFSGKSKGVFHIKDKT-KVFAYKNSIMEIYEVSGKIKELVKD 296 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 +P DI V+V +++ + + +P ++ + ++ + L Sbjct: 297 --GCSPSDIAVIVPNVN-----VAKQISEKLTEMGIPNNVNLQSKLSESKIVRILLQPLK 349 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + ED+LAL++ P + R E + + ++ E + Sbjct: 350 TIYFNYEIEDILALIESPYINTR----ELTMDKVEKFFMEFKM------------IDDEF 393 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 + ++ +E + +E + L + L+ + GL+ Sbjct: 394 SKEKINEITEKIKKLEEVEDDDTYQDRMEKIEEYKTF----IDILKDVFTLLDKVKEGLS 449 Query: 580 QERPLEEWLPVCRDMLNAF--FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 + ++ +L ++ + F FL + ++ ++ L Sbjct: 450 GD-FIKWFLEFVKNSIEDFKVFLSNEYEIMEERNALLKFVEVLNNLLSYDLDIK-SWRTW 507 Query: 638 RDELAQRLDQERIS-QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + + E+ V+I + R + K + D YP Sbjct: 508 FKIINSIIGVEKYRFLERKENAVDIFDITQARFVKKKYKFFVSFLDTYYPSFDLNPLILN 567 Query: 697 MSQKPKRGDRSRRDDDRY-LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE--LID 753 + P + + +R +FL + S YI+Y S PSV E +I+ Sbjct: 568 VLSNPNKLMAFNEEIERRNIFLSLIFS--DTNYITYP-HSTLTGEPLLPSVYANEFGIIE 624 Query: 754 YIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQA 813 + + Y+ + ++ + + W S Sbjct: 625 KVDSTFYIIPPANKVYSYIDKKLYEA--------------FNDEKSLKLNETWQTNFSV- 669 Query: 814 GKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE 873 + + + ++ P + + +V E+ E Sbjct: 670 ----------------KKLSHTLISKYVGCPFYFYLSEKGKVKNFDENKESLYKGILYHR 713 Query: 874 GLSRY------QINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEI--FWETQCQEMQ 925 L +Y I ++++ ++ + + I F++ E Sbjct: 714 VLKKYFEEKPNVILKKIVQETYDEIFTDEFSQYSIPKTVNIEKYLSSISNFFDKMEHEYS 773 Query: 926 QLADRVIACRQPGQ--------SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQG 977 +L + + +++ + + ++ + + Sbjct: 774 KLKEYDPQSIFKLEQVYSSKLKDFLVEVRVD------RIDILKKENKTVYAIIDYKTKLN 827 Query: 978 MQLWLEHLVY 987 + L+Y Sbjct: 828 KIPVEQLLIY 837 >UniRef50_A3CVL1 UvrD/REP helicase n=4 Tax=Methanomicrobia RepID=A3CVL1_METMJ Length = 911 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 74/686 (10%), Positives = 166/686 (24%), Gaps = 138/686 (20%) Query: 308 RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE--NRAVAGVNIEEFSRSDNKR 365 R IY + + +H ++ + A + E D+ Sbjct: 258 RQTIYQWRGSDEQYFEEFTTRYPEAVTIHITENRRSTVAVIETANGFSDTFEDQHYDHMD 317 Query: 366 PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV 425 P+ S EV+ + D++ A++ E+ + DI ++ + + +P Sbjct: 318 PVRREQGGAYLAEMQSDITEVDWIADQIQALVREEK-CSYSDIALLFRSVSTSAPP---- 372 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP--DSRFVSEDVLALLDVPVLAARF 483 F R +P+ + + P + L + D + L P L Sbjct: 373 FIDEFRRRDIPFVVGGKVGLFRRPEILGIGQLFAWLWEDGFWQQGKWSRL---PALRG-- 427 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 + E+ + W ++ W+ + L ++ Sbjct: 428 ----------EDLLEEAVVNWNQGIPDLALEASDVLNLRRWKDSV----LNSTYDNFSQV 473 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 + +L GL + V H ++ L + L Sbjct: 474 FGELLVLLGYHGLDPDDVRHAV-IMANLGRFNTLLTDYETAIML---------------G 517 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 + + ++Y +++ V + T Sbjct: 518 GRRRNWETDLKGLCWYLNTYASSKY-----------------EEQTGDDIGGVDAVQLVT 560 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLG---FDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + + + + +V + M +P + G + +R L AL Sbjct: 561 IHQSKGLEWPLVFVPCMVRQRFPSSMVGKGRTWLISPELFDVAKYEGDLESERKLMYVAL 620 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 A+ +SY + + + S V ++ D Sbjct: 621 TRAKDVAVVSY--FTSMNGRRKGRSAFVGDIEDL-------------------------- 652 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 P R+ LP A ++ + T + + Sbjct: 653 ---------------PHVEPLSQRDTLPDHDYATGGAADEL--------RTFSAGEIVDY 689 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR 900 + EP + + L Q L + E L Sbjct: 690 GKCGYFYRLRHIWG------------YEPGLTDYLGYGQTLHFCLREAADLMKNEDLSPM 737 Query: 901 FRAAGDLPY--------GAFGEIFWETQCQEMQQLADRVIACRQPGQSME--IDLACNGV 950 A + E + + A++ + +E ++ Sbjct: 738 IAVATAVDRNFYMPFMTEGRMEKIKRAAKNHLMRFAEKYRDDMLRIREVETRVEFPVQNA 797 Query: 951 QITGWLPQVQPDGLLRWRPSLLSVAQ 976 + G + + DG + Sbjct: 798 IVAGKVDVILHDGDA-VEVRDYKTSD 822 >UniRef50_Q5WF16 UvrD/REP family ATP-dependent DNA helicase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WF16_BACSK Length = 763 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 56/501 (11%), Positives = 138/501 (27%), Gaps = 84/501 (16%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE-QDVGNPLLASWGKLGRD-- 309 + L + R ++ + E L VG+ + + G D Sbjct: 339 NNRLLQRYQERFAYLLIDEFQDINPVQFEIVKLLAMPQRNICVVGDDDQSIYRFRGSDPR 398 Query: 310 YIYLL-SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 +I + ++ + + + + + ++ + + + + Sbjct: 399 FIRSFTAHYPEAKTIHLVENYRSSHPIIASANRVIAENRTRLEKTLVAQHTSDQLPYLFF 458 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 P ++ + E ++ + + ++ + P +I V+ S + Sbjct: 459 P----------YNEEEEATMIVEEIKRLI--GKGICPSEIAVLYRTSTSVRALVDR---- 502 Query: 429 APADRYLPYAISDRRA-RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 D LP+++ A P + +S L + + ++ LL I + Sbjct: 503 -LVDTTLPFSLEQGFACFYERPFVRRALSFLRIGRNEESPYVMVELLKALF------IKQ 555 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 E L L L +++ Sbjct: 556 EHLDQL---------------------------------------LHIQKTERCSLLEAI 576 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 E A+ + L + ++ ++ E + + + E Sbjct: 577 PFLTELPAFQAKKLKTLPADCRRMQKM--NPSEALAFAEARLGLNETIKKQGQEGNKFEK 634 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 Q + Q+ + D + + + + Q + + T+ Sbjct: 635 GSDDFNQL------KVAATQFETVESFLIHIDHVIAKQQECQTFQTRHPKSIQLLTIHRS 688 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F V ++G +G P D + GD ++R L A+ A+++L Sbjct: 689 KGLEFSHVFIVGAVEGSLPH-------DYALDAWREGDDGPLQEERRLMYVAMTRAKKEL 741 Query: 728 YISYIGRSIQDNSERFPSVLV 748 IS P+ V Sbjct: 742 AISAPVH--YRGKRAHPTRFV 760 >UniRef50_C8WYD2 UvrD/REP helicase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WYD2_ALIAD Length = 706 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 52/442 (11%), Positives = 115/442 (26%), Gaps = 106/442 (23%) Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 L ++ + + +L+ ++ I+ L + + Sbjct: 370 EFLRRFPDAKRVTLETNYRSHDLIVDVGRRIIRLNDGHQLPKRVVAHRSMPEGAIA---- 425 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 S E + L L ++ ++ D V+ +F A A Sbjct: 426 ---QIVTVRSDLEEARFVAQEL-QRLRKEHGVSWSDCAVLYRT-----NIQSRLFEEALA 476 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 D +PY + + P + +L L Sbjct: 477 DADIPYHVVGDKHFYESP----------------DVKIILDYLRT--------------- 505 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 ++ P H + + E G W++V+ + Sbjct: 506 -------------------TQDTSDPTVWGHLLNRPKRYIPIDVVHEVQHGGWEAVVAHP 546 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + + ++ RR +EE + +++ P + Sbjct: 547 -----------KCRAFVTTIDTLRR-------IEEPSKAIQWLVDNH--PGLVRQQDEDE 586 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + ++IA Y D + S+ V + T+ + + Sbjct: 587 PIKWVDSLIASASR--YKTVASFLRFVDWI------IEKSKEPKDEAVQLMTIHKAKGLE 638 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 + V + G+ +G+ P + A G ++ L A A+ LY+ Sbjct: 639 WTTVFVAGLAEGLLPHKKALKG-------------EELREETRLCYVAATRARDNLYLMA 685 Query: 732 IGRSIQDNSERFPSVLVQELID 753 + ER S V + + Sbjct: 686 AKWYG--DKEREVSRYVNAVKN 705 >UniRef50_A8RRN8 Putative uncharacterized protein n=4 Tax=Bacteria RepID=A8RRN8_9CLOT Length = 1331 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 51/415 (12%), Positives = 119/415 (28%), Gaps = 74/415 (17%) Query: 385 EVEVLHDRLLAMLEEDPTL-------------TPRDIIVMVADIDSYSPFIQAVFGSAPA 431 E ++ R+ ++ + + D+++++ + +S VF + Sbjct: 580 EARLIAGRIRQLVSQGQGILVWDKSRGAYRRARYGDVVILLRSMTGWS----EVFVNVLM 635 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 + +P R + +E +SLLS+ D+ + A++ P++ + +E + Sbjct: 636 NEGIPAFAQTRTGYFNTVEVETVLSLLSVVDNPMQDIPLAAVMRSPIV----GMDDEEMA 691 Query: 492 YLRQWVNES---GIRWGIDDDNVRELE------------------LPATGQHTWRFGLTR 530 ++ + G G+ LE + Sbjct: 692 WMMAAYKRNSQKGQDRGVYGAWRLWLEEGPVPEEELEQEEGLRPGEGPGPEEEPEQEEGL 751 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER---PLEEW 587 + + L + AE ++ ++L++ L E P+ E Sbjct: 752 GPGKGPGPEENPDREEGLITVGLCSIPAEAAHSISLKSLKLSLLMERLRGEARHLPIHEL 811 Query: 588 LPVC--RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 L + E + A Y ++L + Sbjct: 812 LYRVYKESGYYDYVSAMPAGETRRANL-DMLVEKAAAYESTSYKGLFHFVRYIEKLKKFD 870 Query: 646 DQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 E V I ++ + + F VV L G+ + +Q A L + Sbjct: 871 TDFGEASVAGEQDNTVRIMSIHKSKGLEFPVVFLAGLG-KRFNKQDAYGQILLDADLGAA 929 Query: 704 GDRSRRD-----------------------DDRYLFLEALISAQQKLYISYIGRS 735 D + ++ + A+ A++KL ++ +S Sbjct: 930 ADFLDLELRVKAPTLKKQALKRRLELETMGEELRVLYVAMTRAKEKLIMTAADKS 984 >UniRef50_C7NJY8 DNA/RNA helicase, superfamily I n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NJY8_KYTSD Length = 1083 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 87/643 (13%), Positives = 172/643 (26%), Gaps = 78/643 (12%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 V S E+ + +L + + V+ A +P Sbjct: 367 LVFPSVHAELSHV-STVLRREHVLAGVPWGRMAVVARGRGR-----TEQVRRALERAGVP 420 Query: 437 YAISDR-RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE--GLRYL 493 +S + PV+ + L+ LA L A + + + Sbjct: 421 VQVSGGGQPVTGQPVVATLLDLVVAALD-------LARLRPGAFAGQGAGSAAVVDQERI 473 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR-MLLGYAMESAQGEWQSVLPYDE 552 W+ G+D +VR L + G+T LL A+ W+ Sbjct: 474 TGWLTS--PVGGLDQTSVRRLRRVLRAEAGAPTGVTSGELLEQAVLDPAHPWERRGAETG 531 Query: 553 SSGLIAELVGHLASLLMQL---NIWRRGLAQERPLEEWLPVC---RDMLNAFFLPDAETE 606 + +A + + + W G+ E L Sbjct: 532 ALRRLATALHAGVAAARRTPDGRGWALGVDAETVLWAVWDGLGLASGWQRQALAGGVAGR 591 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ-RLDQERISQRFLAGPVNICTLM 665 A ++ A + + D + ++ ++ + V + T Sbjct: 592 RADRELDAVLGLFAAAEQFVERRPGAGPDVFVDWMRSSQVARDSLVLGRQRDAVQVLTPQ 651 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGF-------DLMSQKPKRGDRSR---RDDDRYL 715 ++VV ++G+ GV+P DL+ + R D+ Sbjct: 652 TAAGHEWEVVSVVGVQAGVWPDLRLRGSLVGSSRLVDLVEGRAATVADELASVRHDETRQ 711 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLV---QELIDYIGQSHYLPGDEALNCDES 772 FL A A + L ++ + ++E PS L+ + L D + + P + L+ Sbjct: 712 FLVACTRATRCLLVTAVR-----DTEESPSALLNLVEPLPDGAEERPWAPWEPPLDLRHQ 766 Query: 773 EARVKAHLTC-------------LHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA--- 816 A + L H P + E A + A Sbjct: 767 VALARRELLAAAGADTGEDSAPGEHRIDPGARAAWAAELAALVRSEVPRAHPEQWWALRQ 826 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS 876 + P P +V L + +R F E+ Sbjct: 827 VTSARAPWPADTVPSVRPSALGTYQDCALRWFLSTHGGSTPPGRSQEL------------ 874 Query: 877 RYQINQQLLNALVEQDDAERLFRRFRAAGDL--PYGAFGEIFWETQCQEMQQL--ADRVI 932 + LL E R +L P + E + +++ R Sbjct: 875 -GILLHDLLAERPEDPVPALAAEAERRWAELGSPEVWWSRRERERMAEWLRRYEIYRRES 933 Query: 933 ACRQPGQSMEIDLACNGVQITGWLPQV-QPDGLLRWRPSLLSV 974 G + + + GV++ G + ++ + + L Sbjct: 934 GRELVGTELPLAVEAEGVRLAGRVDRLERHPSSGALHVADLKT 976 >UniRef50_Q6AJ72 Probable ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ72_DESPS Length = 733 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 58/599 (9%), Positives = 137/599 (22%), Gaps = 103/599 (17%) Query: 218 ALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLF 277 L L+ LG+H N Y + + L + R + Sbjct: 179 HLADHCADILR-LGRHY-HTFKRDNVLMDYDDLLVNWKLLLQESPEVRSMMSHRFRYVMV 236 Query: 278 RDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 + ++ + + + G + + F P L Sbjct: 237 DEYQDTNLIQADIIRLLASEHSNVMVVGDDSQSIYSF--RGADFYNIMRFPKEFPGAKLI 294 Query: 337 NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSIT---FHVCHSPQREVEVLHDRL 393 ++ + + ++ + + L + Q E + R+ Sbjct: 295 KLEENYRSTQPILSLTNDLIANASEKYTKSLHSNIKGEQRPIVYGARDEQAEATFILARV 354 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 + + + P +I V+ F + + ++ Sbjct: 355 QQHIRD--GIDPSEIAVLFRS-----GFHSYKLEIGLGAAGIEFEKRGGLKLTEAAHMKD 407 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 +S L LL P Sbjct: 408 VLS-------------FLRLLVNP------------------------------------ 418 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG--HLASLLMQL 571 + L R+ A + + P+ A +A L Sbjct: 419 --RDNLSWNRVLLQLDRIGPKTAQKITTTIVPTFDPFLSLKNYPASKASVDIIAGLADLF 476 Query: 572 NIWRRGLAQERPLEEWLP-----VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 R L E + + + + + + + + + Sbjct: 477 RELRVTERTPAALYELVLNYYTPLFERLYSDDYPKREKDLEHFKGVIAGYDDLQKFIDDT 536 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 P + + + T+ + + F V ++G+ +G +P Sbjct: 537 TLDPPAP---------------TADKTPDGKRMVLSTIHSSKGLEFDAVFVMGLAEGRFP 581 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP-- 744 G + +++R L A A++ LY++Y + + + + Sbjct: 582 HANT------------VGFGPQWEEERRLLYVAATRARKHLYLTYPRQMMTPDRQFKRVG 629 Query: 745 -SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 S + EL D + + +L+ A + S Sbjct: 630 MSPYLVELKDMLYERVEGSSTSSLSRPSRFAESNSPRPVGIPAGRRSRPAGLKRADLSL 688 >UniRef50_Q0BZ49 UvrD/REP helicase domain protein n=2 Tax=Rhodobacterales RepID=Q0BZ49_HYPNA Length = 1137 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 76/617 (12%), Positives = 138/617 (22%), Gaps = 125/617 (20%) Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 +F S E++ + R+ A D T RD V+ + R Sbjct: 528 SFVSVESKDHEIDEIAARISAAC--DDGTTFRDQAVICKGNARLAEIAAG-----LEARG 580 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P P ++ +SLLSL L F + E + Sbjct: 581 IPVLFLG--PLFDRPEIKEALSLLSLVIDPRAMA-----LTCIASMKPFRMFIEDVAVAI 633 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + V + +D V + S Sbjct: 634 EAVRTTKKPLPLDWRTV-----------------------------------LETASGMS 658 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 L ++ + + + Q Sbjct: 659 EGGRASAKALVGAFEEIEPTATAWQVFTKIYLDRTRLAADIAT--QAREGNANPALALWQ 716 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA----GPVNICTLMPMRSI 670 + + L L D+ + V + T+ + + Sbjct: 717 FQNFLRSVLPEKSGYPIRDLLDHIRRLVILSDERDLRDLPATAQTINAVRLMTIHGSKGL 776 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG---------DRSRRDDDRYLFLEALI 721 FK++ L + PR G D ++ R LF AL Sbjct: 777 EFKMLHLPSLTSDSIPRSAKQSRGLHPPDGMIEGPMFRGSDAIDAGHDEEQRCLFFVALS 836 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 A+ L++ Y + + S V ++ + + + + Sbjct: 837 RAKDGLFL-YAPNKKSNGHRQSRSSFVDDISGQLADQKPISAVRDVVGEAERFT------ 889 Query: 782 CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFW 841 L + L F Sbjct: 890 ------------------------------------------LEVDGVARMSPSQLATFD 907 Query: 842 AHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRF 901 P R FF LQV R +S + + L A + E + Sbjct: 908 KCPRRFFFAHVLQVGGRRLESAPMRMHNAVQAVID-------ELTARPDDTPDETEMQSI 960 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQLAD-----RVIACRQPGQSMEIDLACNGVQITGWL 956 A + +G + Q +L R CR+P Q++ + V +T Sbjct: 961 IDAAWVAHGPIEHGYASEYRQICDELLKFFILLRQGECRRPPQTLSLRFEDAEVVVTAHE 1020 Query: 957 PQVQPDGLLRWRPSLLS 973 + R Sbjct: 1021 QIETSHSTVFRRIRTGR 1037 >UniRef50_Q3AA35 ATP-dependent helicase/nuclease subunit A n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=ADDA_CARHZ Length = 1167 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 90/762 (11%), Positives = 197/762 (25%), Gaps = 169/762 (22%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 +D L N IE D +P + H RE ++ ++L + EE Sbjct: 485 ADYLPNANCFAELHLIEGKPEEDINSNGEPEEDLTAVH------REARLVAAKILKLKEE 538 Query: 400 D-----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 L RDI+ + ++ +P + + + Sbjct: 539 GFKVFDRETKEFRPLQYRDIV----ILSRSLSNSSNIWQEELTRAGIPVYVEGAGSFLNS 594 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 + S L + D+ + A+L PV +T E L +R+ Sbjct: 595 KEILLMTSFLKVIDNPCQDVPLAAVLCSPV----AGLTYEELWQVRK------------- 637 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 + L LG DE S + + L Sbjct: 638 ---------EYPEGLLYDALKNKSLGK---------------DELSVKSQKFLELLVEF- 672 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 + L+++ L E + L F E + + + + Sbjct: 673 -------QKLSRQISLAELVNEIYRKTNLPEIFGAYPGGEVRQANL-KLLHDLAVDFAEI 724 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQ----RFLAGPVNICTLMPMRSIPFKVVCLLGM-- 680 G + L+Q + E S V + ++ + + F VV ++G+ Sbjct: 725 NGGG---IYNFLTFLSQAAESEDFSPAKLIGEADDVVRVMSVHKSKGLEFPVVFVVGLGK 781 Query: 681 ------NDGVY-------------PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 ++ V+ P + +R R ++ + AL Sbjct: 782 RFKFDYSNTVFLHSDLGFGPKFFDPEKRIRRHSIASQILSERMRRETLAEEMRILYVALT 841 Query: 722 SAQQKLYISYIGRS------------------IQDNSERFPSVLVQELIDYIGQSHYLPG 763 A++KL + ++ + D + + Sbjct: 842 RAREKLILVGTVKNLAKKMAGWQSQTEALKDTLSDGQIARAGNFLDWIG---PVVFREGS 898 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 D + + +P + + +AG + Sbjct: 899 DLPDCLKVEVHPQQEKIEGEQWELPEVLRVKLLTKTPFTEETDYTGQFRAGLEFNYPGLK 958 Query: 824 LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL-----EGLSRY 878 + LP + + L+ ++ S + E F+ +G Sbjct: 959 IAK-LPAKMSVSDLKEVFS--------------TDDVISLEDEDEVFLPGVYFEDGAMLG 1003 Query: 879 QINQQLLNAL-----VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQE-MQQLADRVI 932 + + L + + + A G LP + + + + L R++ Sbjct: 1004 IVYHEFLRRIDFQGDLSASGLKAQGETLVAEGVLPPESREMLDFTKIARIFATPLGQRIL 1063 Query: 933 ACRQPGQSMEIDLAC-------------NGVQITGWLPQVQPDGL----LRWRPSLLSVA 975 R+ L + + G + + + + W+ ++ Sbjct: 1064 RAREIYPEFPFTLGVKAGEIYPEATGFSEKILVRGVIDLLALEEDGFFIVDWKTDRVTGD 1123 Query: 976 ---QGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAE 1014 + ++ + L A + + K+ F L E Sbjct: 1124 ILNERLKEYAGQLNLYARAVEEITGKKV-KEKYLYFINLEKE 1164 >UniRef50_B0NWV2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NWV2_9CLOT Length = 1188 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 79/747 (10%), Positives = 205/747 (27%), Gaps = 147/747 (19%) Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWG 304 Y + + ++++ + + S + +L + + + G Sbjct: 401 DEYQDSNYIQDAILRSVSKESEGGHNMFMVGDVKQSIYSFRLARPELFLEKYH------G 454 Query: 305 KLGRDYIYLLSDLESSQ----ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 + Y L +L ++ E+ FV+ ++H +I +N A+ E Sbjct: 455 YQQKGEEYQLIELRNNFRSRSEVLTFVNDVFYQIMHEDLGNIEYTQNVALVPTMEFEQGC 514 Query: 361 SDNKRPLDPLDSSITFHVCHSPQR----EVEVLHDRLLAMLEEDPT-------------- 402 L + + S + E ++ R+ M++ + Sbjct: 515 DAQTELLLLESNEVK----DSEEDAVILEARMIATRIHEMIDGEDPMMVTGKDEEGNMIL 570 Query: 403 --LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 DI++++ + + + IQ + +P ++++ + +SLLS+ Sbjct: 571 RKAKYSDIVILLRSMKTNAEVIQ----KELMNAGIPAFANNQKGYFDTVEIRTLLSLLSV 626 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 D+ ++ D+ A+L P++ ++EE L L+ Sbjct: 627 VDNIYMDIDLAAVLRSPMI----GMSEEELGRLK-------------------------- 656 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 ++ + + + + LL L + L Sbjct: 657 ---------------VDGEKDSLYECLCETKDKMEKSKKAL----ELLDLLRDAKTYLPL 697 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 + + WL + + + + + I ++ + + L Sbjct: 698 TQLI--WLALEKSGYYHYAGAMPQGKKRQGNIL----MLVEQAKAFESSQIKGLFHFVRF 751 Query: 641 LAQRLD-----QERISQRFLAGPVNICTLMPMRSIPFKVVCL------------------ 677 + Q + E + V I ++ + + + +V + Sbjct: 752 IEQCREYDMDYGEANTMSEDQDLVRISSIHKSKGLEYPIVFVSKIHQKFNLRDGNGSMIF 811 Query: 678 -----LGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 +G D + P L + + R ++ + A+ A++KL ++ I Sbjct: 812 HGDYFIGA-DHIDPVYRTRKKTILKNLIKNQMTRESLGEELRVLYVAMTRAKEKLILTGI 870 Query: 733 GRSIQD----------NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 + D + S + + +P + + + Sbjct: 871 KKDDIDWNAKGEVTAIDRLSGRSYF-DWIKKALP---MIPKQDYRLKIYTLEDLLWQQEG 926 Query: 783 LHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQR--F 840 + Q + E + A ++ H + ++R Sbjct: 927 NELLHEMNRQIFYERLNDQIPNENVKALKESFAYHYR--NEAETKGRLKYSVSEIKRMSQ 984 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN-----ALVEQDDAE 895 A + + S + TE + S+ I ++ Sbjct: 985 AADTEEVMYSSVFMEKEKRIPSFVKKTE--RISAASKGTIIHKVFELLDFSKDYTMKSLN 1042 Query: 896 RLFRRFRAAGDLPYGAFGEIFWETQCQ 922 R+ + G L I+ + Sbjct: 1043 EDIERWISLGKLKKEYEKVIYRKEILA 1069 >UniRef50_C6PW57 UvrD/REP helicase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PW57_9CLOT Length = 1112 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 47/519 (9%), Positives = 135/519 (26%), Gaps = 122/519 (23%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E + + + D L +DI ++V R +PY I Sbjct: 419 EGMAVIKAIK--ILRDKNLEFKDICILVRSRSVIPDI-----EEELKRRNVPYCIIGGVG 471 Query: 445 RQSHPVLEAFISLLSLPDSRFVSE-------DVLALLDVPVLAARFDITEEGLRYLRQWV 497 ++ ++L + F E + + +L + F+I+++ L + Sbjct: 472 FYQKAEVDEILNLYKVIVRGFSGEFTYEENKNFIQVLR----GSLFEISDDTLLKM---- 523 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 + + ++++ Y++ G+ Sbjct: 524 ------------------NIEKEESSLEN----------------LYEALKVYED--GMH 547 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 +E + + ++L +L + L+ + ++ + C ++ D + + Sbjct: 548 SEKLLNTVTILEKLAGLKEKLSVVQIIQAIIKEC-NVFEIMLCQDNGLQKFRN-----IE 601 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR-----FLAGPVNICTLMPMRSIPF 672 ++ E L + + ++ + V I T+ + + F Sbjct: 602 KLLQEAEKFDREQLFTLEQFVNYINLLDEENGDDSEAALDTEDSEAVKIMTIHQSKGLEF 661 Query: 673 KVVCLLGMNDGVYPRQLAP--------LGFDLMSQKPKRGDRSRRDDDR----------- 713 K V + ++ + L + ++ Sbjct: 662 KGVIIPKIHSDLLSMSKKDKPNLVYNKNSIILSKDLENVELTTPEYEEYLNSKLEKEIEE 721 Query: 714 --YLFLEALISAQQKLYISY--------IGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 L A+ A+ + ++ + D + S +++L + Sbjct: 722 TERLLYVAMTRAEDYVILTGGDDGKDPTPIKDETDKIKELNS-FLKQLKYSFTVGNADKE 780 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 + ++ + +E L + + Sbjct: 781 LIEFINSDDIEDLEVIKRKISKVQ--------------IDKEKLQESLNYKGNIKNYA-- 824 Query: 824 LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 +V ++ P R + + L +N + Sbjct: 825 -------SVSATRYMKYLKCPRRFYLESVLNINGKDYIE 856 >UniRef50_D2B0K9 Superfamily I DNA and RNA helicase-like protein n=2 Tax=Actinomycetales RepID=D2B0K9_STRRD Length = 1228 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 68/567 (11%), Positives = 147/567 (25%), Gaps = 91/567 (16%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDA-FVDVTPDNLLHNIQSDILELENRAVAGV 353 VG+P + +G G L V ++ +L++ R + Sbjct: 293 VGDPCQSIYGWRGASAGNLTRFPRDFTTASGELAPVRRLSISFRNGDAVLDVAARVQLPL 352 Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVCH-SPQREVEVLHDRLLAMLEEDPT---------- 402 +E + ++ H + E + D + +L + Sbjct: 353 RMEAREVPVLVPGGNRVERGRVVCAFHETADDEAAWVADGIARVLGGESAPDGMPWGEGE 412 Query: 403 --------------LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 L P D+ ++ + A +R +P + + Sbjct: 413 RKKAKQSAWGGPQCLQPHDVAILARKRSQF-----PALRRALEERGIPVEVVGLGGLLTV 467 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 P + ++ L + + ++ LL P R+ I L+ L + E R + Sbjct: 468 PEVSDIVATLRVLYDPTAGDALVRLLSGP----RWRIGPADLKELGERARELN-RETREG 522 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 ++ L + + + P L ++ Sbjct: 523 GSMASDPLDQVVADMAEERGSLIDALDELPDRPEWQDLFSPLARV---------RLLAMA 573 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 +L I R Q P + + + R + + T A + Sbjct: 574 QELRILRAHTGQPLP-DLIIEIERRLGLDIEVAARGTAIGPFAARADLDAFLDAAARFAG 632 Query: 629 GDAVP-LSLLRDELAQRLDQERI---SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 P L L ++E + + V + T+ + + + VV + GM+ + Sbjct: 633 DSEDPTLGAFLAFLKAADEEENGLDAGRVGESNSVKLMTIHASKGLEWPVVVIPGMSQAL 692 Query: 685 -----------YPRQLAPLGFDLM-------------SQKPKRGDRSRRD---------- 710 +P + S P+ G S+ + Sbjct: 693 SKAGTLTVGTMFPARPTTSPKWTDNPRKLPYPLRGDASDLPRLGGLSKEELAEFDERCRD 752 Query: 711 ----DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA 766 ++R L A+ A L S PS + E+ + G+ + Sbjct: 753 RDLLEERRLAYVAVTRAHYLLIASGYRWGSAA-KPLEPSDFLVEIRETCGRVSVWAPEAG 811 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQN 793 + + P + Sbjct: 812 EGA--TNPLLAEPAEAGWPVTPDGLRY 836 Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 45/366 (12%), Positives = 94/366 (25%), Gaps = 61/366 (16%) Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 D P AP D++ + D++ A A+Q + S Sbjct: 894 EDEEVPFPEAPEDEDVLFLEVPEFFDDPDDEE------ATSRARQDV--SAEAVHEA--- 942 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 V E + G+ E E + + P + + + + Sbjct: 943 -------VHEAVHEGGRVPGEEPGNGHVLPEGEPGPEHRRVPEEGQEPGNERAGALADLR 995 Query: 801 SYAREWLPAASQAGK------AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQ 854 + +E A + + A + LP + + +L + P + + + Sbjct: 996 GWDKERAKAWERDTELLLRERAVNRRRGGGQVELPTHLTVSSLVTLASDP-KTLARQVRR 1054 Query: 855 VNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE 914 R R + L + Q +R +LP + G Sbjct: 1055 PVPRKPTPLA-----------RRGTSFHRWLESRWGQ-------QRLLDEMELPGSSDGF 1096 Query: 915 IFWETQCQEMQQLADR--VIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLL 972 + Q +++ + + + + G + V R+ Sbjct: 1097 EETDIQLDQLRDRFEESEWAGREPLDVEVPFETMIADRLVRGRMDAVFELPDGRYEVVDW 1156 Query: 973 SVAQGMQ-----------LWLEHLVYCASGGNGE-----SRLFLRKDGEWRFPPLAAEQA 1016 Q + L L + + F+R + R L E+ Sbjct: 1157 KTGQRPEGKKAEAAAAVQLAAYRLAWSHLADVPLAQVSAAFHFVRLNETVRPVNLLDERG 1216 Query: 1017 LHYLSQ 1022 L L + Sbjct: 1217 LVRLIE 1222 >UniRef50_A6GVZ8 Putative uncharacterized protein n=3 Tax=Flavobacteriales RepID=A6GVZ8_FLAPJ Length = 922 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 128/1045 (12%), Positives = 310/1045 (29%), Gaps = 230/1045 (22%) Query: 66 ASFIWDMFVRVLPEIPKESAFNKQSMSW-----KLMTL------LPQLLEREDFTLLRHY 114 +F+ ++ ++L E K++ ++ ++ K+ L LP + T + + Sbjct: 4 NTFLENLVSKLLSE--KKTILSETTIILPNKRAKIFLLEAFKKKLPHFTFAPEITSIEDF 61 Query: 115 LTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 + + ++ R + LF+ Y VY + + W L + Sbjct: 62 IQEIANIRSI----DSIELLFEFYTVY-----LSVTAKEKQQTFEQFSNWGKTLLQDF-N 111 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 + H + Q IE ++ + L YL+ + L + Sbjct: 112 EIDRYLLDPKHVFSYLQD-IEVIKRWGIEIED---------KTTLIDNYLEFWKLLPLYY 161 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 + + R E ++ + Q Sbjct: 162 DTFYTHL-----------KNKEIGYQGLIYREAVTNLEEFITAFKNKKIVFAGFNALNQA 210 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 ++ L + + D+ L++ D R + + Sbjct: 211 EE---------------KIVQQLIAKDIASIYWDIDAV-FLNDYSHDAGLFVRRFKSSWS 254 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 + + + D +I + +++ + + ++P + + +++ D Sbjct: 255 HYKTNPFEWVSTNFSEDKNIQIIGTAKAIGQAKIVSGIINKQISDNPNASLDKVALVLGD 314 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR---------F 465 + P + ++ S + I+ + +++P+ L + ++ F Sbjct: 315 ENMLIPMLHSLPASVGS-----LNITMGYSSKNNPIQLLIAKLFKMHNNALNRSESSYVF 369 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 +DVL +L P+ + +VN S + + I + + +++ Sbjct: 370 YYKDVLDVLSNPI--------------IESYVNASKVIYTIKKN--NYTFITHQKVVSFQ 413 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 R+ L + + + E++ + +L+ + +++E + Sbjct: 414 ENPNRLFE--------------LLFQKWNQKPIEILELICEILLIIKSNLESISEEDKV- 458 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 + L + I + +I +Y + + L Q + Sbjct: 459 -----VKTFLYS--------------IYKVINKLITYCSKNEYIENID--TLHTIYKQVI 497 Query: 646 DQERIS-QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 D +S + + I ++ R + F+ V + +N+G +P F K + G Sbjct: 498 DLAEVSFEGEPLSGLQIMGVLESRVLDFETVIITSLNEGKFPAGKTVNSFIPYDVKRELG 557 Query: 705 DRSRRDDDR---YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 + ++ D Y F L A+ + D E+ S + +L Sbjct: 558 LPTYKEKDAIYTYHFYHLLQRAKNIYLLYNTESDGLDGGEK--SRFITQL---------- 605 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFV 821 + H P P KA S + Sbjct: 606 ----------EVEKQPKHNLTHEIIQPVVPNIASKTI-------------VIPKAKSAMI 642 Query: 822 QPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQIN 881 + + L + +P++ +FQ L + E E I Sbjct: 643 RLKEIATGKGFSPSALTTYIRNPIQFYFQRILSIRESEEVEENIALNTL-------GTII 695 Query: 882 QQLLNALVEQD-----DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD------- 929 Q L AL + + L + A D F EI+ E + ++ + L Sbjct: 696 HQTLEALYKPIINKFLTTDDLNKMLAVANDEVLKQFKEIYKEGEVKKGKNLLAFEVAKRN 755 Query: 930 ------------------RVIACRQPGQSMEIDLACN-GVQITGWLPQVQPD----GLLR 966 +++A P + + D + ++I G + +++ ++ Sbjct: 756 VFNFLIEEKKQIENGDVVKILALETPLERILEDNSLPFPIKIAGNVDRIEIRNNKIRIID 815 Query: 967 WRPSLLSVAQG-MQLW------------LEHLVY------CASGGNGESRLFLRKDGEWR 1007 ++ + ++ W ++ L Y A+G E+ + K+ + Sbjct: 816 YKTGKVEKNSVQLKDWNGLTLDIKNDKIIQLLCYAFMYEKQANGLEIEAGIISFKNMKGG 875 Query: 1008 FPPLAAEQALHYL----SQLIEGYR 1028 F P +Q L S+++E ++ Sbjct: 876 FLPFGIKQGKEILININSEILEHFK 900 >UniRef50_C4G8V9 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G8V9_9FIRM Length = 1315 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 50/397 (12%), Positives = 120/397 (30%), Gaps = 59/397 (14%) Query: 385 EVEVLHDRLLAMLEEDP---------------TLTPRDIIVMVADIDSYSPFIQAVFGSA 429 E ++ +R+ +++E L +DI++++ S VF Sbjct: 564 EANMIGERIQRLMKEQKVVNEEAEEGDQNPLRRLRYQDIVILLRSPGSNG----QVFVDR 619 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +P I+ + + F++LLSL ++R + A++ V F TE+ Sbjct: 620 LTQMGIPAHITSGKGYFDTVEVSRFLALLSLLNNRQDDRSLAAVMLSHVFGEPF--TEDQ 677 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L +R D++ +R +L E + +L Sbjct: 678 LYLIRSAYPRLTTGQDRGDESRDIQNACLWESLEAMESYSRGILAGEKEDSDQRPGHLLE 737 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 D L + +L R + P+ + D +L Sbjct: 738 LD------TSLPQKVLDFCDRLEAARARIP-YTPIHRLIEELLD--ETAYLNYVTALPGG 788 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD-----QERISQRFLAGPVNICTL 664 + ++ E + + L + + + V I ++ Sbjct: 789 QIRRANLLKLVDEAIRFEGSSYRGLYRFMNYIQKLRTYNVDLSAAELIGEEDDAVRITSI 848 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL-----MSQKPKRGDR------------- 706 + + + VV + G+ + + + + +S + + + Sbjct: 849 HKSKGLQYPVVFVCGLGQ-KFNMRDSSGDMLIEMDLGISLRTRNAAKRTMSDSLFHRAVS 907 Query: 707 -----SRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 + ++ + AL A++KL +S +++ Sbjct: 908 DQRKENSLAEEMRVLYVALTRAKEKLILSGSLSRLKE 944 >UniRef50_C8PM70 ATP-dependent DNA helicase, UvrD/Rep family n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PM70_9SPIO Length = 1167 Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats. Identities = 71/574 (12%), Positives = 150/574 (26%), Gaps = 102/574 (17%) Query: 385 EVEVLHDRLL-----------AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 E L ++ L T D V++ + QAV+ Sbjct: 530 EAYTLAQKIADIHAERYLVYDEALHATRPCTWSDFAVLLR-----ASTHQAVYERFFRAF 584 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY ++ L +LL L L P + +++ L Sbjct: 585 KIPYISVQQKGLFHDAPLNDICALLRLAVYPNDRAVYAQTLRSPFVR----LSDRSFTRL 640 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + E + T R+ GY + + E + L YDE Sbjct: 641 MLYSLEHEGQPFNPAAAEELEAEDRQYFLTACALFERI-QGYIKKKSNAELITALWYDE- 698 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 +R L E +L D L A + E + +++ Sbjct: 699 -------------------GYRYILLTEPRYHRYLE-LYDYLFALAVKADEAKQSLSAFI 738 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + I +R++ I V I T+ + + F Sbjct: 739 DTLISYIHA-------------------EERIEDMEIPLEHGGDAVKIMTVHKSKGLEFP 779 Query: 674 VVCLLGMN--------DGVY-------------PRQLAPLGFDLMSQKPKRGDRSR-RDD 711 +VC+ +G+ P ++ ++ ++ ++ + Sbjct: 780 IVCIPDCGNAGKSETKEGMVFLHKDLGPVIHLPPETKNDPSANIFFEELRQEANAKHLAE 839 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNC 769 + L A+ A+ +L +S + + D + P ++E+ + Q + + Sbjct: 840 TKRLLYVAVTRAKVRLVMSGVQETGCDAEDLPEFP-RGLEEIRQQLVQPQQEEKNRSF-F 897 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP 829 V + LH P + + R+ + P P Sbjct: 898 QLLLPAVSDDIAGLHFAEVL-PLPASTVQHTAEDRQRFNLDETRALYRQAAEKNFPLAEP 956 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV 889 +P ++ + + L F + +S +A Sbjct: 957 RVIPATQFEKDTQ-----WLR--LSEAPLPSTEHTEKEIAFSADAIS-------ATDAAS 1002 Query: 890 EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQE 923 + + +L FG + + Sbjct: 1003 TAKPVDGNIGAEQGEDELSSTEFGTLVHKAMEAR 1036 >UniRef50_D0WNM4 Helicase, UvrD/Rep family n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WNM4_9ACTO Length = 1079 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 93/701 (13%), Positives = 186/701 (26%), Gaps = 134/701 (19%) Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY-AISDRRARQSHPVLEAFISLLS 459 + ++ V+ ++ +A R +P I R + P ++A +SL+ Sbjct: 371 RGIPYSEMAVVTRSRSTHPGL-----RAALVRRGVPVGQIGTDRPLREEPAVDALLSLVR 425 Query: 460 LPDSR-FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 L R F S +++ +L P++ I LR + + + + G L L A Sbjct: 426 LALDRAFGSAELVRVLTGPLV----GIDPLRLRQIGRILRGGELARGGSRSESELLSLAA 481 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 G + + + + E++ + Sbjct: 482 EGPSRLSEVAPKGI-----GDLLRAARMLETVREAAERSNRQAEEV---------LWAAW 527 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 EEW A +AA + ++ Q A VP+ + Sbjct: 528 ESSGKAEEWRK-------AALRGGTAGDAADSALDSVIQLFRVAQRMADRDVDVPVDAVL 580 Query: 639 DELA--QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 DEL + A V + T ++ V + G+ DG++P + Sbjct: 581 DELQTHDLPEDSIARAGAAAQTVTLTTPNSSIGRQWEFVVVAGLQDGLWPNMRLRDAYTA 640 Query: 697 MSQK------------------PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 + ++ DD+ A+ A +L ++ D Sbjct: 641 TGRLAQIVTGRDPGAGADGLAGRRQAYEEILDDELRQLHHAVTRANGELLLTCA-----D 695 Query: 739 NSERFPSVLV-------QELIDYIGQSHYLPGDEA-------------------LNCDES 772 + E PS +EL D GD + Sbjct: 696 SEEARPSRFFELMGFVPEELQDAASAGRQGSGDARQSGGSPDVAGAQSPSAALDSDGVRH 755 Query: 773 EARVKAHLTCLHTRMP--------FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 A L R + G A E L +AG ++ Sbjct: 756 AAAASGRLVLESPRAAEGELDVVGLVADIRRSGAGGREAEEVLARLREAGFRQADRCTWA 815 Query: 825 PFTLPET-----------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE 873 P V ++ P+R F + + D Sbjct: 816 EALEPTPSRGIEAGGTVVVSPSRVETMLDCPLRGFLSLV-------GAEDSDDRRT---- 864 Query: 874 GLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA 933 + + E + F A+ + + + + L + + + Sbjct: 865 -ADIGTLVHAIAERS-AGASREEIMGDFEASWAAFDKPEDPVAAQAEYARARILVEGLAS 922 Query: 934 CRQ--------PGQSMEIDLAC-NGVQITGWLPQVQPDG----LLRWRPSL--LSVAQGM 978 + I + +GV ++G + +V+ DG ++ ++ +S Q Sbjct: 923 YLEDFARGGGSAEVERRISVDMEDGVVLSGKIDRVEHDGAARRIVDFKTGKHTVSAKQAE 982 Query: 979 QLWLEHLVYCASG----GNGESRLFLRKDGEWRFPPLAAEQ 1015 L A G + + L A++ Sbjct: 983 DNVQLQLYQWAMGKSGLPADGGAALVYLGQTLKKTNLPAQR 1023 >UniRef50_C0ERA8 Putative uncharacterized protein n=1 Tax=Neisseria flavescens NRL30031/H210 RepID=C0ERA8_NEIFL Length = 342 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 40/325 (12%), Positives = 93/325 (28%), Gaps = 70/325 (21%) Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 ++ L L + +L +++ P I + L+ E G+ Sbjct: 1 MLAYLRLAVNPDDDNALLRVINFPP----RGIGARTVENLQTASQEQGV----------- 45 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 WQ+ + +A L+ L Sbjct: 46 ----------------------------SLWQAACNAGAKAAKVAA----FVRLIEALRN 73 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA--------EGLG 625 + + L + + + + + +++ A I E L Sbjct: 74 QVGQMPLPEIIAGILKD-SGLTEYYQTQKGDNQDRLDNLDELVNAAIEFKPEDSNFEILS 132 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 D +L L+ + + T+ + + F V L GM +G + Sbjct: 133 DNISDDPAFPILAFLSNAALESGENQAGAGEKAIQLMTVHAAKGLEFNAVFLTGMEEGRF 192 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--F 743 P +++ +R +++R L A+ A+++LYI+ + + + Sbjct: 193 PSEMS------------LAERGGLEEERRLMYVAITRARKRLYITMAQQRMLHGQTQFGI 240 Query: 744 PSVLVQELIDYIGQSHYLPGDEALN 768 S V+E+ + + + Sbjct: 241 VSRFVEEIPPEVLHYLSVKKPAYDS 265 >UniRef50_Q03NA7 ATP-dependent helicase/nuclease subunit A n=1 Tax=Lactobacillus brevis ATCC 367 RepID=ADDA_LACBA Length = 1262 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 45/385 (11%), Positives = 110/385 (28%), Gaps = 80/385 (20%) Query: 385 EVEVLHDRLLAMLEEDPTL-----------TPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 EV ++ ++ ++ + + T DI ++ + + Sbjct: 556 EVLMVGQKIQQLIADQTPIYDREAKQVRPMTYGDITLLTPTRTNNL-----IITDELRRL 610 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P ++D R ++ ++LL + D+ + + A+L P++ + E L L Sbjct: 611 GIPVVVNDARNYFKTTEIQIMMALLQIIDNPYQDIPLAAVLRSPIV----GLNENELALL 666 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R +N+ + + + +P +++ Sbjct: 667 R--INQRTGDYYQAVLHFQRSFVP---------------------------------NQA 691 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEE-WLPVCRDMLNAFFLPDAETEAAMTLI 612 S + ++ L QL +R Q+ + W + E + Sbjct: 692 SDFQQAVYQKVSHFLEQLQEFRDIAQQDELVTLIWRIYQETGFLDYVGGMPAGEQRQANL 751 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI-SQRFLAGPVNICTLMPMRSIP 671 + + + L +R D + V++ T+ + + Sbjct: 752 -HALYERAKSYEQSSFKGLFQFVRFVERLQERDDDLAGAPVQAADDAVSVMTIHGSKGLE 810 Query: 672 FKVVCLLGMN--------DGVY--------------PRQLAPLGFDLMSQKPKRGDRSRR 709 F VV ++ + G Y P + R+ Sbjct: 811 FPVVFIMDASRQFNKQDQQGNYVMSGKTGIGIDYLDPDSRVKAPSLQKLVTAQAISRASL 870 Query: 710 DDDRYLFLEALISAQQKLYISYIGR 734 ++ AL A+ ++YI + Sbjct: 871 AEEMRKLYVALTRAESRVYIVGSHK 895 >UniRef50_B7GQ33 UvrD/REP helicase n=2 Tax=Bifidobacterium longum subsp. infantis RepID=B7GQ33_BIFLI Length = 1371 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 58/436 (13%), Positives = 116/436 (26%), Gaps = 87/436 (19%) Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 + E + N +D + D++ T +V+++ R+ + E Sbjct: 574 FDAEAIELLVSNAAPDLSADVVADENGTDTAPTVRAGKDEL-QVDMIVRRVQELCEGPRA 632 Query: 403 -LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 + DI V+ ++ +P + P ++ + L + Sbjct: 633 QYSYGDIAVLARGATHFADLADR-----LYRVGIPVEVQGVGDLYRQPEIQIALDWLRII 687 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 +R ++A+L T++ L +R W D Sbjct: 688 ANRHQDVPLVAVLRT------MGFTDDDLARIRL----HNRGWLFDVMRR---------- 727 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 A + + +VL D L+ +++ L ++ A+ Sbjct: 728 -------------IAESGGEADESAVLSSDV-------LLAKISAFL-RIYDAACDYARV 766 Query: 582 RPLEE--WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 L + W L F E E + AQ P Sbjct: 767 HSLSDSLWHLYAVSGLFDFAGNMPEGERRQANLR-LLVEKADAFAVAQERGLQPFLDAVT 825 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP-------- 691 + E S V+I T+ + + + VV L+G ++ + Sbjct: 826 MWSASGSGEEASTVPTKNAVHIMTIHKSKGLQWPVVILMGASNNLLTGSRTAVVRTIAHQ 885 Query: 692 ------------LGFDLMSQKP--------------KRGDRSRRDDDRYLFLEALISAQQ 725 G + + R ++ L A+ A++ Sbjct: 886 TRNEDGAVAEYGEGALSLVDQRNHVRVDTFQRAVIDSRAKELEAAEELRLLYVAMTRAER 945 Query: 726 KLYI--SYIGRSIQDN 739 KL I SY D Sbjct: 946 KLIIAGSYRPGKNDDG 961 >UniRef50_A9WPI7 ATP-dependent DNA helicase n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WPI7_RENSM Length = 1073 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 81/667 (12%), Positives = 163/667 (24%), Gaps = 110/667 (16%) Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR- 442 ++ + +R++ D RD+ V+V + FG +P IS Sbjct: 377 QQRRFVAERIMH-FHVDRERPLRDMAVIVRTGAQVA-----AFGRYLVSHGIPVRISAAE 430 Query: 443 RARQSHPVLEAFISLLSLPDSR--FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 + P + + + + +E + LL ++ +R +R+ + Sbjct: 431 TPVRDEPAVRPLLLAYRVAVTPELLDAELAVDLLTS----RIGGLSSVQIRRVRKLLRAE 486 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 I G EL + + L + G A + G + Sbjct: 487 EIANG-GVRGSDELLVEGLQRPAQLAAL--GVDGRAAARMATVLAAGSQAMTEPGANPQS 543 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 V EW A DA A ++ Sbjct: 544 V------------LWALWDATGLSTEWA-------TAALREDANGSRADRDLDAMMALFQ 584 Query: 621 AEGLGAQYGDAVPLSLLRDEL--AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 A + A + L + ++ V + T + VV + Sbjct: 585 AAERYVEQSPAASPEAFVEYLLNQELPMDTLAARAESGDAVEVMTPASAAGRQWPVVIVA 644 Query: 679 GMNDGVYPRQLAPLGFD---------------LMSQKPKRGDRSRRDDDRYLFLEALISA 723 G+ +GV+P + R R D+ F A+ A Sbjct: 645 GLQEGVWPNNRLRGELLGSQYLVEVLELGAASARRLAAVQRMRDIRYDELRSFATAISRA 704 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 ++L +G S +D PS + D + D + Sbjct: 705 SERLI--CVGVSSEDEQ---PSGFL----DLVDPWPIEDNDGLRPLTDVRRPKTLRALVA 755 Query: 784 HTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP------------------LP 825 R + + + AA + V LP Sbjct: 756 ELRQANERGANERDSDDRAEQPAAEAARVLAELARNAVPGADPSSWWGLAPLSSTDPILP 815 Query: 826 FTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE-GLSRYQINQQL 884 V ++ + F Q L+ S + + Sbjct: 816 VDAVVPVSPSKIEAVHESALSWFLQ--------------AAGGEAQLDLARSLGTLIHGI 861 Query: 885 LNALVEQDDAERLFRRFRAAGD--LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME 942 L + E L LP + +++LA + G + Sbjct: 862 AQDLPAGNAEELLAELANRWPALGLPENWETAAQLRRAERMLRKLAGYLRLISAQGHELV 921 Query: 943 -------IDLACNGV-QITGWLPQVQPDGLLRWRPSLLSVAQ------GMQLWLEHLVYC 988 I++ + + G + +++ L + ++ + Y Sbjct: 922 GVEQGFGIEVPGARIAALKGIVDRLELTAEGTLIVVDLKTGKNKPTAAQVEQHPQLGAYQ 981 Query: 989 ASGGNGE 995 + +G Sbjct: 982 VAAKHGA 988 >UniRef50_A6CGD0 ATP-dependent DNA helicase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CGD0_9PLAN Length = 693 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 46/434 (10%), Positives = 115/434 (26%), Gaps = 83/434 (19%) Query: 308 RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 R+ + + E + + + + + I++ N Sbjct: 283 RNILDFPQEYEGTTVVTLEENYRSTQPILQATNQIID----------EAHERYEKNLWSS 332 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + C + + + ++L + + V+ + Sbjct: 333 KISGEAPCLVDCSDNNEQADFVVQQVLE--HREAGIPLNQQAVLFR-----ASHHSLSLE 385 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A R + Y ++ ++ L L ++ + L +L + I + Sbjct: 386 VELARRNIAYHKYGGLKFIETAHVKDLMAYLRLAENPRDAVSGLRVLTLLP-----GIGQ 440 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + + L + ES R+ + Sbjct: 441 KKAQQLINLLAESQFRFDAWSEFKPP---------------------------------- 466 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 A V H + + +++R + + R + + Sbjct: 467 ----------AATVEHWPLFVRLMKNLSSPQSEKRGISAEVHQVRTFYSPLLDQQYDNAT 516 Query: 608 AMTLIEQQWQAIIAEGL-GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + +Q + + + + + + L + D S + + T+ Sbjct: 517 SRQRDLEQLEQVASRFSSRMSFLEEITLDP----PSSTQDVSAASGADDDDFLVLSTIHS 572 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + + V +L DG P +++ D D++R LF AL A+ Sbjct: 573 SKGLEWDAVYVLQAADGSIPSEMSLESED------------EIDEERRLFYVALTRAKNW 620 Query: 727 LYISYIGRSIQDNS 740 LY+ + R N Sbjct: 621 LYVCFPHRQYFQNR 634 >UniRef50_C7MBM5 DNA/RNA helicase, superfamily I n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MBM5_BRAFD Length = 1058 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 78/676 (11%), Positives = 165/676 (24%), Gaps = 91/676 (13%) Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 ++++RP P ++ P E ++ L + + D+ V+ + + Sbjct: 336 AESRRPRAPRPGALVTLRAQDPLDEARLIGSALRDLHHR-EGVQYDDMAVVCRSGAAVAD 394 Query: 421 FIQAVFGSAPADRYLPYAISDR-RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + LP + R + + P + + +L + + + + L +L Sbjct: 395 L-----ADLLSRTGLPVRVPRRPQPLREVPAIADLLRILEIGLAPQDA-PLDPRLATELL 448 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 F + LR R G + L R L+ + Sbjct: 449 RGPFG-DADTLRLRRIRRLLLGAHR----------AAEPDSETPSEQLLARALVDEEVPG 497 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV------CRD 593 LP E+ A + + ++ + AQ+ W R Sbjct: 498 --------LPAPEARDRAAAPIHRVREMIRAVREHPEADAQQVLWHAWNASGLAGGWRRA 549 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA-VPLSLLRDEL--AQRLDQERI 650 L + D + A L +++ ++ Sbjct: 550 ALGSAGDVDGARSRLAASRLDALLELFAAAERLTDRRPGAGALELVEQIRGQAVVEDTLA 609 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR-- 708 G + + T + V L + +G +P ++ R R Sbjct: 610 PAAAARGRLAVLTPAQLAGEHRDTVVLARLQEGAWPDLRLRSTLFGAAELQLRAGARRGA 669 Query: 709 -----------------RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 D+ L + AL A++++ ++ + + + PS L + Sbjct: 670 ELPIEPEAVRALQREQVIADELRLAVSALARARRRVLVTAVQ-----DEQNEPSALFEAF 724 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA-----REW 806 + + + DPQ + A Sbjct: 725 EGMAADPWIDLETLRRDPGPAPDARRLVAALRRRLRGEDPQTVRDAALALDALGRAGAPG 784 Query: 807 LPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 + S P + L+R P + I Sbjct: 785 TDPGRWYHQEPSSTAPLHEDDTPIRLSPSALERAVDCPQSWLMERAGGTRAGGPAQLI-- 842 Query: 867 TEPFILEGLSRYQINQQLLNALVEQ--DDAERLFRRFRAAGDLPYG---AFGEIFWETQC 921 L D E L G G Sbjct: 843 -----------GTALHHLAQVHPRGPADAEEDLLAELHTLLRAVPGTETWSGRRRVRRAE 891 Query: 922 QEMQQLADRVIACRQPG-QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL 980 + LA + + +P ++ VQ+ G + +++ D L + + Sbjct: 892 DAARLLAAHLRSAGEPLAVEAPFEVELGRVQLRGSIDRIEGDPTGL-HVVDLKTGRAAKS 950 Query: 981 W------LEHLVYCAS 990 L+ Y A+ Sbjct: 951 AAKAEEDLQLAAYQAA 966 >UniRef50_UPI00019738F0 recombination helicase AddA n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019738F0 Length = 1273 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 59/464 (12%), Positives = 129/464 (27%), Gaps = 110/464 (23%) Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS 373 L + + + T D++L + DI + + + Sbjct: 544 LEEQRDPFSTEILLINTKDSVLEELDDDISDYTRQEL----------------------- 580 Query: 374 ITFHVCHSPQREVEVLHDRLLAM-------------LEEDPTLTPRDIIVMVADIDSYSP 420 E ++ R+ + L RDI++++ + ++ Sbjct: 581 -----------EARMIGKRIRELTDPERGCPVWDKELGRYRKAEYRDIVILLRSVSGWA- 628 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 F A + +P + + +E ++ L++ D+ + A+L P Sbjct: 629 ---ESFVETLAHQGIPAFAESKTGYFTTIEVETMLNFLAVLDNPMQDIPLTAVLKAPF-- 683 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG--YAME 538 F +T+ L + A +H+ G R + G Sbjct: 684 --FGLTDRELAEI-----------------------AARFKHSANRGQDRGMYGAICLYL 718 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM--LN 596 + + E++ LAS RR A P+ E + D+ Sbjct: 719 GESDQAGETMQSSAEGEREPEILEKLASFFRVTEQLRRE-AVYLPIHELIYRIFDVTGYY 777 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ--ERISQRF 654 + E + A Y ++L + E + Sbjct: 778 DYVSAMPAGETRRANL-DMLVEKAAAYEATSYRGVFHFIKYIEKLKKYNTDFGEASTAAE 836 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ--------------- 699 V I ++ + + F +V + M + RQ + S+ Sbjct: 837 GGNTVRIMSIHKSKGLEFPIVFVAAMG-KQFNRQDTRGKILIDSRFGIGTDYLNAETRLK 895 Query: 700 --------KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 +R D ++ + A+ A++KL ++ R+ Sbjct: 896 APTLKKNVLKRRMDLENMGEELRVLYVAMTRAKEKLILTASDRN 939 >UniRef50_Q2S1K7 Putative uncharacterized protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S1K7_SALRD Length = 1073 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 90/713 (12%), Positives = 173/713 (24%), Gaps = 101/713 (14%) Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSIT---FHVCHSPQREVEVLHDRLLAML 397 I + A P + + ++ +EV+ L LL Sbjct: 261 RIGRPQPEAPPPQTAAARFVDAPLPPGETANGTVQEVHVRRAVGSAKEVDALVRDLL--- 317 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 D + ++ + VA Y I A LP +I+ + A ++ Sbjct: 318 --DADVPFDEVEIAVAGEQPYVSLI----ADRAARVGLPVSIATGVSAGQTRTGTALLAF 371 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L F ++ +L L + +R + E+ G + + L Sbjct: 372 LEWVTEDFDPAVLIRMLRSGHLR---------IDRMRSEM-ENETGAGSLEAHEVATLLA 421 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL-NIWRR 576 A R G + L E + L + +L Sbjct: 422 ARRYEPGRDGYAKALGAAIGELEDRIAE--LEEQGLEPERDRERRRALRFVARLVEALLD 479 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDA------ETEAAMTLI-EQQWQAIIAEGLGAQYG 629 + +E ++E + + F D E + + + + Sbjct: 480 LVPREASVQEMAARAQRFVERFGPVDPPPEDKPEADRTLDEAGRTVLWQRLDRLVRVPVD 539 Query: 630 DAVPLSLLRDELAQRLDQERISQR-FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 L L + L+ + + G ++ L + ++GM+ Sbjct: 540 YEASGPQLAALLRRWLEGQYVRAEHPRPGTAHVVPLESAGYGARSHLYVVGMDSDTLSTA 599 Query: 689 LAPLGFDLMSQKPKRGD---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 + D RS D+ ++ +AL L + + Sbjct: 600 AVEGAMLRDPDRRALSDSMDGELPERRSASDEAQWHHEQALARHTGVLSLYTRIFDLDSG 659 Query: 740 SERFPSVLVQELIDY-IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE 798 ER+PS L L + +S G ++A LT R + Sbjct: 660 EERYPSPLFLRLAEAPTVESERTEGIVPTGERTRLNDMEAWLTAFRNRGGEGRGTGTARD 719 Query: 799 RQSYAREWLPAASQAGKAHSEFVQPLPFTLPE-----------------TVPLETLQRFW 841 S WL A +A L E + L+ F Sbjct: 720 ALSDCYPWLRRGEDARQARQSDAYTAHDGLLEAGTYPELDFLRDRENGGPMSAGRLETFA 779 Query: 842 AHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL------------- 888 P F + L V E + + L L R I A Sbjct: 780 ETPYLYFLKYVLGVEPLDEPALDDEP---WLNALRRGSILHATFEAFMTTLREGDERPAA 836 Query: 889 ----VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR-------------- 930 + +D + F+ P E + + Sbjct: 837 EHEPLLEDTLQAAFKAETEQVAPPSDVVEEAAFRRLRADALVFLRAETAHCRTHAPLYHE 896 Query: 931 -------VIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 + ++ I + + + G + +V + Sbjct: 897 VGFGYGPYRRQEEDFGAVTIPVEGREMSLRGRIDRVDRRPDGTLAVWDYKTGR 949 >UniRef50_A4IKW7 ATP-dependent helicase/nuclease subunit A n=94 Tax=Bacteria RepID=ADDA_GEOTN Length = 1242 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 50/386 (12%), Positives = 105/386 (27%), Gaps = 84/386 (21%) Query: 387 EVLHDRLLAMLEE-----------DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 ++ +++ ++ RDI+V+V + + I+ + + Sbjct: 560 RLMAEKIKEIVSRPFYVYDRSSGQQRRAMYRDIVVLVRSMTNAPQMIEQ-----LQAQGI 614 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 P A + +SLL + D+ + + A+L P+ F E L +R Sbjct: 615 PAAADLSSGYFQATEISVMLSLLKVIDNPYQDIPLAAVLRSPL----FRFDENELAMIR- 669 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + + T+ L Q+ +G Sbjct: 670 ---------------------LSDPKGTFFEAL----------------QAFCQKTAETG 692 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF-FLPDAETEAAMTLIEQ 614 S L +L WR +A+ R L + + + F+ + Sbjct: 693 EEENAKEKAISFLNKLEEWRT-MARRRSLADLIWQLYRDTQFYDFVGALPGGKQRQANLR 751 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPF 672 + + + L +R D V + T+ + + F Sbjct: 752 ALYDRARQYESTSFRGLFRFLRFIERLQERGDDLGAARPLGDQEDVVRVMTIHSSKGLEF 811 Query: 673 KVVCLLGMNDGVY----------------------PRQLAPLGFDLMSQKPKRGDRSRRD 710 +V L+G+ Y PR + + Sbjct: 812 PIVFLVGLARPFYTRDLHSPYLLDKELGFAARFVHPRLRISYPTLPLLAIQVKKRLELLA 871 Query: 711 DDRYLFLEALISAQQKLYISYIGRSI 736 ++ + AL A++KLY+ Sbjct: 872 EEMRILYVALTRAKEKLYLLASVNDA 897 >UniRef50_D1BAW6 DNA/RNA helicase, superfamily I n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BAW6_SANKS Length = 1124 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 87/692 (12%), Positives = 158/692 (22%), Gaps = 107/692 (15%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 RA A + ++ D D ++ V SP E + L A Sbjct: 363 HRRAPARSLDAAAAAAEASDGTDSTDGTVETAVLPSPALEEAHVAKTLRAE-HLVRGTAW 421 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD-RRARQSHPVLEAFISLLSLPDSR 464 + V+ A +P A+ + P + + L + Sbjct: 422 SQMAVVARSGSELVRL-----RRALGGAGVPVAVVGTDVPLRDEPAVRPLLRALRASATG 476 Query: 465 FVSEDVL-ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 ++ +V LL P+ R LR G D V L PA Sbjct: 477 DLAPEVAVELLTSPLGGIDAVGLRRLRRALRGEELAGGGGRTSDALLVEALGDPARVVTL 536 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + A ++ E+ G A+ V A Sbjct: 537 PSDVVR------APRRVARVLEAGRTALEAPGANAQTV------------LWALWAAADV 578 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 E W + A ++ A + D + Sbjct: 579 AETWRSIA-------VNGGPGAARADRDLDAVMAVFRAAETFVERVPQATAVAFADHVES 631 Query: 644 RL--DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK- 700 + + V + T ++VV + G+ DG +P Sbjct: 632 QDLPADTLAKGAAASDTVQLLTPAGAAGGEWEVVVVAGVQDGTWPDLRLRDSMLGSQALV 691 Query: 701 -------------PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 + R+ D+ F A+ A ++L ++ + + PSV Sbjct: 692 DVLSGRSQDATSTGRDARRAVLADELRAFAVAVSRASRRLVVTAVRDVDSE-----PSVF 746 Query: 748 VQ-----------ELIDYIGQSHYLPGDEALNCDESEARV-------------------K 777 V E D L G + E A + Sbjct: 747 VDLVSPDDDGSDTEPPDVFAAPLDLRGVVSTLRTELAAALSMDGAAGSAGSAGSAGSAGS 806 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL-------PFTLPE 830 A AR +A L Sbjct: 807 AGSEGAARTAAPASTARAASVAGLLARLAGAGVGEADPTSWYGSAELSTPAALRAPDETV 866 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE 890 V +++ +R + + + + L Sbjct: 867 PVSPSKVEQVHRCALRWALESAGGTAGSALSQSV-------------GNLVHDIARELPA 913 Query: 891 QDDAERLFRRFRAAGDL--PYGAFGEIFWETQCQEMQQLADRVIACRQP-GQSMEIDLAC 947 AE R +L P G +++LAD ++ Sbjct: 914 AGHAELAAELDRRWHELGMPDGWPATQTRRRADAMVRRLADYYTEISGEVLVEESFEVQV 973 Query: 948 NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ 979 + G + +++ G R + L +G+ Sbjct: 974 GRAVLRGSVDRLERSGEDGVRVTDLKTGRGIP 1005 >UniRef50_B6ATC9 Double-strand break repair protein AddB n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6ATC9_9RHOB Length = 980 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 97/709 (13%), Positives = 195/709 (27%), Gaps = 106/709 (14%) Query: 305 KLGRDYIYLLSDLE-SSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 + LL L + + + D P + ++ ++ L V N Sbjct: 258 HPQYRFANLLKSLSMHPKTVPLWHDTPPVD---TARNKVVSLA-LRPVPVTDGWLRDGPN 313 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 L +T + + E + RL E+ T ++ D + Sbjct: 314 LGDLPSAMQHVTLLEPQTSREEALAIAMRLRFAAEQGKTA-----ALITPDR-----MLT 363 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 +A + S Q P +L L +E +L LL P+ Sbjct: 364 RQVTAALDRWDIKPDDSAGLPLQLSPPGRFLRHVLELFTRPLDAEALLTLLKHPLTHTG- 422 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 +E G L E IR ++ L + G + A Sbjct: 423 --SERGTHLLLTRELELSIRKNGPAFPTKDSLLAWAKDNKL-DGAKSWIDWVANTFCGHL 479 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 E + L D Sbjct: 480 CDGPQNAVELAERHIGLAER---------------------------ISQGAQDVGTGDL 512 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP-VNIC 662 E A QW A+ + + D L + + P V I Sbjct: 513 WKEGAGREAMSQWVALRSNLDAL---PDLSTRDYADLFGGVLSRGEVRNPDAGHPNVLIW 569 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL------F 716 + R ++ L G+N+G +P +P + + R D +R + F Sbjct: 570 GTLEARVQGADLLILAGLNEGSWPEAPSPDPWL---NRRMRADAGLLLPERRIGLSAHDF 626 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 +A+ A +++++ RS D+++ PS + L + + + D + ++ + R Sbjct: 627 QQAI--AAPEVWLTRAQRS--DDAQTVPSRWLNRLTNLM--NGLPDQDGPVTIEQMQTRG 680 Query: 777 KAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLET 836 L H A A +P P + + Sbjct: 681 NDWLERAHQLE---------------------TPIGANPAKRPSPKPAIEVRPNQLSVTE 719 Query: 837 LQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER 896 ++ P + + L++ + D L G++ +Q+ + + + + + A Sbjct: 720 IKTLVRDPYEIYAKHVLRLAPLDSLVKTADA---RLRGIAVHQVFEDFVRSWDKGETAAD 776 Query: 897 LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ------SMEI----DLA 946 L + D + +LAD +A + Q +E+ L Sbjct: 777 LMAHAKRIFDSDVDWPSARL--MWAARIARLADDFVAEERERQKIAMSSRLEVKGESTLP 834 Query: 947 CNGVQITGWLPQVQPDGLL-----RWRPSLLSVAQGMQLWLEHLVYCAS 990 G +T ++ D ++ + + L+ A+ Sbjct: 835 ELGFTLTVKADRIDLDERGGAYLYDYKTGAIPSKPQQLAFDMQLLLEAA 883 >UniRef50_A4WWS4 RecB family exonuclease-like protein n=41 Tax=Proteobacteria RepID=A4WWS4_RHOS5 Length = 1000 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 134/1008 (13%), Positives = 266/1008 (26%), Gaps = 183/1008 (18%) Query: 13 LEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDM 72 L + + + + V + M + + + L G + Sbjct: 28 LVRGLRARMAGAPPEA-MARVELYVNTQRMRRRV-VELMTAEGAGFLPRI--------RL 77 Query: 73 FVRVLPEIPKESAFNKQSMSWKLMTLLPQLLE-REDFTLLRHYLTDDSDKRKLFQLSSKA 131 + P + +L L+ +L+E + D + LF LS Sbjct: 78 VTELPPVPGLPAPVPPLRRRLELAQLVARLIEAQPDIAP----------RSALFDLSDSL 127 Query: 132 ADLFDQYLVY--RPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANL 189 ADL D+ P+ +A+ ++ + WQ +A + + A Sbjct: 128 ADLIDEMQGEGVPPEAIAR------LDVADHSAHWQRT--QAFMAIVAPMFGADAPDAQA 179 Query: 190 YQR--FIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYY 247 R PP P V + G + +QA+ + + L+ Sbjct: 180 LARMTVERIAARWAEAPPDHP--VIVAGSTGSRGTTALFMQAVARLPQGALVLP------ 231 Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG 307 D +LP L D Q + L+ G Sbjct: 232 ---------------------GFDFDLPAEVWDGLGDALTAEDHPQFRFHRLMGLVG--- 267 Query: 308 RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 + ++ + D P + ++ ++ L A V + + L Sbjct: 268 ----------AAPSQVHRWTDEDPPSP---ARNRLISLS-LRPAPVTDQWLTEGQRLTDL 313 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + P+ E + ++ + ++ +D + Sbjct: 314 ALAAEGMALIEAAGPRAEALAVA--IILRKAAEDGRRA---ALITSDRG-----LTRQVA 363 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 +A + S R + L R E +L LL P+ A D Sbjct: 364 AALDRWGIVPDDSAGRPLALSAPGRFLRHVARLFGQRLTGEALLTLLKHPLTATGSD--- 420 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + +RW D L R + W Sbjct: 421 ----------RGNHLRWTRD----------------LELHLRRKGPPFPTGGDLDLWAGA 454 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET-- 605 P D A+ L L+ L+ + E Sbjct: 455 RPDDGV----ADWARWLGGLIEGLDAVGNRPLSDHVAAHLALAEALAAGPAGTGTGELWL 510 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLM 665 + A + + E + L D + R + Q + I + Sbjct: 511 KEAGEAARAAVEELRREAPHGGELTTADYTDLFDAILARGEVREAVQAHP--GLMIWGTL 568 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA----LI 721 R +V L G+NDG +P+ P + + + G +R + L A Sbjct: 569 EARVQGADLVILGGLNDGTWPQLPPPDPWLNRQMRLRAGL---LLPERRIGLSAHDYSQA 625 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 A ++ ++ R+ + +E PS + L++ + G EAL + R Sbjct: 626 VAAPEVVLTRATRNAE--AETVPSRWLNRLMNLMSGLKAQGGPEALEAMRARGR------ 677 Query: 782 CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFW 841 + A + A QP P+ + + ++ Sbjct: 678 ----------------GWLALASALEQPEAPVPLAARPAPQPPVSARPDRLAVTGIRTLI 721 Query: 842 AHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDA--ERLFR 899 P + + L++ PD R I ++L V+ +R Sbjct: 722 RDPYAIYARHILRLYPLDPLHRAPD-------ARLRGSILHRILEEFVKDRAPGTDRAAE 774 Query: 900 RFRAA--------GDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME----IDLAC 947 R R ++P+ A ++ + + A +E +DLA Sbjct: 775 RARLMRIAETVLTDEVPWPAARALWLARLDRAADFFLETEAAHGGTPVVLEEEGRVDLAP 834 Query: 948 NGVQITGWLPQVQPDGLLRWRPSLLS-----VAQGMQLWLEHLVYCAS 990 +T ++ R + + + + L+ A+ Sbjct: 835 LRFTLTAKPDRIDRLPDGRLHILDYKTGTPPTRKQQEQFDKQLLLEAA 882 >UniRef50_D1BPN9 Recombination helicase AddA n=3 Tax=Veillonella RepID=D1BPN9_VEIPT Length = 1288 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 41/387 (10%), Positives = 106/387 (27%), Gaps = 93/387 (24%) Query: 380 HSPQREVEVLHDRLLAMLEEDPTLT----------PRDIIVMVADIDSYSPFIQAVFGSA 429 + +RE++ + ++ + + RD ++ + + +AV A Sbjct: 557 ENNERELDFIIQKIKEIHAAKKQVQNPDGTFRQIEWRDFAILRRSLAGWGT--RAV--EA 612 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +P +++R ++ ++LLS+ D+ + A+L ++ + Sbjct: 613 MRQAGIPAVVNERDGYFEAQEIQLLLALLSIIDNPEQDLPMAAVLHSGLV----GLDANE 668 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L LR + W + Sbjct: 669 LGALR------------------------------------------LSGEGSLWSLMPA 686 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN--AFFLPDAETEA 607 Y E + L + + + WR L++ + + L + + + Sbjct: 687 YAEVAQD-----ERLLAFIGHMERWRT-LSRRHGVTDLLWDIYESQDYVNYVGAMPNGLV 740 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPVNICTLM 665 + + + + L ++ V + T+ Sbjct: 741 RRANVL-ALYDRAKGYEASGFRGLFRFLRFVESLRDSNQDMPLANVVSEADNVVRLMTIH 799 Query: 666 PMRSIPFKVVCLLGMND----------------------GVYPRQLAPLGFDLMSQKPKR 703 + + F VV L G+ G +P Sbjct: 800 KSKGLEFPVVFLSGVQKRFNMMDLRSELLIDKNAGLGLKGYFPDIRVSFPTMPWFYVKDV 859 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYIS 730 + + + +++ + AL A+ KL+++ Sbjct: 860 KEAALKAEEQRILYVALTRARDKLFMT 886 >UniRef50_Q3JCF0 DNA helicase/exodeoxyribonuclease V, subunit B n=2 Tax=Nitrosococcus oceani RepID=Q3JCF0_NITOC Length = 911 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 106/826 (12%), Positives = 221/826 (26%), Gaps = 129/826 (15%) Query: 240 FTNPCRY--YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 +P + W + + + L + +E + S + Sbjct: 84 LLSPLQEQSLWERVIYDSPYSGALLQVPATVRTAQEAWRLWHAWRLPLAGQSLFLTEDTQ 143 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL-----ELENRAVAG 352 L W ++ DY + L++++ DA + + + IL + Sbjct: 144 AFL-EWAQVFEDYCRVDHWLDNARLPDAVGGMLESGQIPLPGTVILAGFDEYTPQQQELL 202 Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 +E E+ V LE P I V+V Sbjct: 203 AVLERQGVLLQVFANQGGSQQTRRVALADTIEEITVAARWARHRLEHSPG---EKIGVIV 259 Query: 413 ADIDSYSPFIQAVFGSAPA-DRYLP--------YAISDRRARQSHPVLEAFISLLSLPDS 463 +++ + +F + LP Y +S + +P++ + +L L Sbjct: 260 PELEFLRVQVARIFDDILHPEAVLPGRGRIERAYNLSLAQPLADNPLVHTALLILELSKG 319 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 ++ A L P + + + L+ Sbjct: 320 ELSMVEMGAFLRSPFV------GAAEQEF----------------SHRALLDAYLRKTRE 357 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 R L R+ L L Q + L +P Sbjct: 358 ERVSLERLWK--------------AAITAREEDANHRCPALGERLQQFKVEVDSLPARQP 403 Query: 584 LEEWLPVCRDMLNAFFLPDAE--TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 W L P + ++I + + ++ ++ + Sbjct: 404 PSGWAQSFTCWLQLLGWPGERPLDSEEYQAVSAWHKSIQSFSSLDRVVPSLKKNVAIGKF 463 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 L + PV + ++ F +LG++DG++P P + + Sbjct: 464 RHLLVETLFQPENPIVPVQVMGVLEAAGEQFDAAWMLGLHDGIWPTAPRPNPLLPIELQR 523 Query: 702 KRGDRSRRDDDRYLFL-----EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 +R L E L+++ + +S+ R + + + PS L+ EL + Sbjct: 524 HYRLPHASA-ERELAYTRVVTERLLASAPVVIVSHPRR--EGDRDLRPSPLIAELASVLP 580 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 + L E+ + + L L A +Q G Sbjct: 581 ERLQLASVESYVNEIQQTGRMETLV-------------------DAQGPPLEAGAQVGGG 621 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS---EIPDTEPFILE 873 L+ A P RAF + RL E S E D I Sbjct: 622 TGL-----------------LKAQAACPFRAFAEYRLGAKGLEEPSVGLESLDQGILIHV 664 Query: 874 GL----SRYQINQQLL---NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 L + Q LL + AE + + F E F + + ++Q Sbjct: 665 ALQYLWEKLQNQHTLLSCSAEELHGLIAEAAKQAIATQTAVRPRIFTERFTAIEQERLEQ 724 Query: 927 LADRVIACRQPGQSMEI-------DLACNGVQITGWLPQVQPDG-----LLRWRPSLLSV 974 L + + + L G+ + ++ ++ ++ + Sbjct: 725 LLLEWLERDKQRPPFAVLHQERSQPLNLGGLSLDTRADRIDQLESGERVIVDYKTGRSNP 784 Query: 975 AQGM---QLWLEHLVYCASGGNGESRLFLR--KDGEWRFPPLAAEQ 1015 + +YC + + + + GE ++ + E+ Sbjct: 785 RHWFGERPEEPQLPLYCIAHEAPLAAVLFAQVRRGEMKYLGVTKEE 830 >UniRef50_A5ZW44 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZW44_9FIRM Length = 1233 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 46/392 (11%), Positives = 103/392 (26%), Gaps = 86/392 (21%) Query: 385 EVEVLHDRLLAML-------EEDPTLT---PRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 E + R+ ++ ++ T DI++++ ++ F A + Sbjct: 546 EALAIAQRIQKLVGIEEVLDKDSGTYRKAGYGDIVILLRTSAGWA----EPFSQVLASKG 601 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P + R + + ++ L + D+ + +L A + L +R Sbjct: 602 IPVYTASRTGYFAAQEVVTLLNYLRICDNPMQDIPLTGVLHS----AIGGCNTQELAIIR 657 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + R D+ Sbjct: 658 ------------------SKCPDGMLYESLLAFRERKT------------------DDRD 681 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLI 612 L ++ + L R LA P+ E + + + + Sbjct: 682 EEELVLREKISHFIELLEEMRD-LAVYTPVHELIQYILRKTGYGDYVRVIPGGAQRGANL 740 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG----PVNICTLMPMR 668 + + Y ++L + + + LA V I T+ + Sbjct: 741 HMLVEKAME-YEKTSYRGLFNFVRYIEKLQKY--EVDFGEVNLADAGNGAVQIMTIHKSK 797 Query: 669 SIPFKVVCLLGM----------------------NDGVYPRQLAPLGFDLMSQKPKRGDR 706 + F +V GM D + P + L ++ R Sbjct: 798 GLEFPIVFAAGMGKQFNFQDINSRFLIHPDMGFGVDVILPEKRLILSTVHKQIIRRQLKR 857 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 ++ + AL A++KL I+ + D Sbjct: 858 ESLGEELRVLYVALTRAKEKLIITGTIAKLAD 889 >UniRef50_Q1JCJ8 ATP-dependent helicase/nuclease subunit A n=14 Tax=Streptococcus RepID=ADDA_STRPB Length = 1222 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 80/687 (11%), Positives = 176/687 (25%), Gaps = 141/687 (20%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 EV ++ ++ + D + DI ++V+ I F +P + Sbjct: 566 EVTIVAKEIIKL-HNDKGVPFEDITLLVSSRTRN-DIISHTFNQY----GIPIVTDGGQQ 619 Query: 445 -RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 + + L ++ ++ALL P+ F E+ L + Sbjct: 620 NYLKSVEVMVMLDTLRTINNPRNDYALVALLRSPM----FAFDEDDLARI---------- 665 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 + + + R ++G + L+G Sbjct: 666 --------ALQKDNELDKDCLYDKIQRAVIGRG--------------AHPELIHDTLLGK 703 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 L L L WRR A+ L + + + + F+ ++A + A+ Sbjct: 704 LNIFLKTLKSWRR-YAKLGSLYDLIWKIFN--DRFYFDFVASQAKAEQAQANLYALALRA 760 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQER----ISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 + L + + L+ + + VN+ T+ + + F V +L Sbjct: 761 NQFEKSGYKGLYCFIKMIDKVLETQNDLADVEVAAPKQAVNLMTIHKSKGLQFPYVFILN 820 Query: 680 MN---------------------------------DGVYPRQLAPLGFDLMSQKPKRGDR 706 + + + + Sbjct: 821 CDKRFSMTDIHKSFILNRQHGIGIKYLADIKVLLGETTLNSVKVSMETLPYQLNKQELRL 880 Query: 707 SRRDDDRYLFLEALISAQQKLYI--------SYIGRSIQDNSERFPSV----------LV 748 + + L A+ A++K+Y S + + P + Sbjct: 881 ATLSEQMRLLYVAMTRAEKKVYFIGKASKSKSQDITDPKKLGKLLPLALREQLLTFQDWL 940 Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP 808 + D + + L P D ++ + E + A + L Sbjct: 941 LAIADVFSTEDLYFDVRFIEDSDLTQESVGRLQTPQLLNPDDLKDNRQSETIARALDMLE 1000 Query: 809 AASQAGK-----------AHSEFVQPLPFTLPETVPLETLQRFWAH------PVRAFFQM 851 A SQ ++ L E + ++ +++ P F + Sbjct: 1001 AVSQLNANYEAAIHLPTVRTPSQLKAAYEPLLEPIGVDIIEKSSRSLSDFTLP--HFSK- 1057 Query: 852 RLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGA 911 +V + + LS+ Q LL+AL E D E + Sbjct: 1058 --KVKVEASHIGSALHQLMQVLPLSKPINQQTLLDALREIDSNEEVKTALD--------- 1106 Query: 912 FGEIFWETQCQEMQQLADRVIACRQPGQSMEI----DLACNGVQITGWLP--QVQPDGLL 965 +I + Q I ++ + G + + D ++ Sbjct: 1107 LKKIESFFCDTSLGQFFQTYQKHLYREAPFAILKVDPISQEEYVLRGIIDAYFLFDDHIV 1166 Query: 966 RWRPSLLSVAQ---GMQLWLEHLVYCA 989 Q + + + L A Sbjct: 1167 LVDYKTDKYKQPIELKKRYQQQLELYA 1193 >UniRef50_A3TGM2 Putative ATP-dependent DNA helicase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TGM2_9MICO Length = 1047 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 87/641 (13%), Positives = 173/641 (26%), Gaps = 87/641 (13%) Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 S H+ S +E + RL A D + D+ V+V + A Sbjct: 345 EGGSSEVHLLRSASQEAGFIAARLRAAHLLDD-VPWSDMAVIVRGQSRSAGL-----RRA 398 Query: 430 PADRYLPYAISDRR-ARQSHPVLEAFISLL----SLPDSRFVSEDV---LALLDVPVLAA 481 +P + ++ + P + ++LL L R V L +L P+ AA Sbjct: 399 LQSSGVPVSAAEAELPVRDEPSVRPLLTLLQVVADLALGRAEDVPVDVALDVLVSPLGAA 458 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 R LR+ ++G D+ L PA G + +G + + Sbjct: 459 DPVELRRLRRALRREELDAGGSRTSDELIAEVLLRPAVHDRLGIEGRSVQRIGRMIRAGV 518 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 +V G+ AE + R +W A Sbjct: 519 EACGAVEGEWG-PGVSAEGI------------LWAMWDASRLAGQWRETALGGGAAGART 565 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PVN 660 D + + +A G L+ L Q + + ++ R G V+ Sbjct: 566 D----RDLDAVLAVLRAAATYGERLPGSSPEAF--LQHVLGQDVPGDTLAARAPTGESVS 619 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK----------PKRGDRSRRD 710 + T + +V + G+ +G +P + + R Sbjct: 620 LLTPQSAAGRQWPLVVVAGVQEGSWPDLRLRGSLLGSQDLVDVVRGRAGGHRAALAAVRH 679 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV---QELIDYIGQSHYLPGDEAL 767 D+ LF A+ A + L ++ + + PS + L D + + Sbjct: 680 DETRLFHVAVSRASRSLLVTAVRS-----EDEQPSPYLDVVDPLPDDADRREASDWARPV 734 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT 827 ++ + R + G AR A A + L Sbjct: 735 TLPALVGALRRDVVSDDMRR-------RGGAITGLARLARAGVPGADPASWWVLHGLSDE 787 Query: 828 LPE-------TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQI 880 P V + F + ++ P + + Sbjct: 788 RPRRGPADPVRVGPSAIDGFTSCQLKWALTKVGG------------DGPM-IGQRDIGTL 834 Query: 881 NQQLLNALVEQDDA--ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD-----RVIA 933 ++ L R+ G LP G ++ + +LA + Sbjct: 835 IHEIAAEGDADAATMRATLDERWPRLG-LPQGWSTDLKRRQAEGMVDRLARFFDENTAVG 893 Query: 934 CRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSV 974 ++ + + + ++G + ++ R Sbjct: 894 WQRLAAESRMKVELGRIVLSGTVDRLDVSPSGEVRVIDYKT 934 >UniRef50_B2UU61 Rep helicase, single-stranded DNA-dependent ATPase n=16 Tax=Helicobacter RepID=B2UU61_HELPS Length = 676 Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 54/537 (10%), Positives = 144/537 (26%), Gaps = 58/537 (10%) Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 P ++ +I D K ++ + E NPL Sbjct: 162 HTPYAAFYENILDEFENTKKKHNYIDYNDLLLLFKQAMLERPSPYKEVLCDEFQDTNPLQ 221 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQ----SDILELENRAVAGVNIE 356 S + L + Q + AF + + Q + + L + I Sbjct: 222 ESI-LDAINPPSLFCVGDYDQSIYAFNGADISIISNFTQKYKNAQVFTLTKNYRSSKEIL 280 Query: 357 EFSRSDNKRPLDPLDSSITFHV-----------CHSPQREVEVLHDRLLAMLEEDPTLTP 405 + + + ++ + + + + R++ + +D Sbjct: 281 DLANQVIQHNERIYPKNLEVVKSGHFNKPALLNYNDNIAQCQDIAKRIV--MRKD----F 334 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 +++ V+ + S +A +P + + + + +L + Sbjct: 335 KEVAVIFRNNAS-----ADQLEAALRSHNVPSKRKGSASFFESKEVALALDICALIFNPK 389 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 + +L ++ T + + + ++ + N + T Sbjct: 390 DIMAAIHVLSH--ISDIGSNTAKDIHEALMLLGNGDLKLALTHPNKEAKIYTKKKEITSM 447 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDES---SGLIAELVGHLASLLMQLNIWRRGLAQER 582 + + L+ + A Sbjct: 448 GLFEEIFALENSSRFNSVIDKAFHSHPVLMHPKISLNGAKMLSDFFILYTK-----APTH 502 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV----PLSLLR 638 + + + + + + ++ + + L+ Sbjct: 503 SPSALIKHILESVFFQTFKTRLLKERSKNKDGSYNEFKKLQAQKRFNEKMDLLSSLAKNY 562 Query: 639 DELAQRLDQERISQRFLA--GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 L + L+ I VN+ ++ + + FK V ++ + +G +P Sbjct: 563 QNLGRFLNGTLIGSSEATQGEGVNLLSVHASKGLEFKDVYIIDLMEGRFPN--------- 613 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN---SERFPSVLVQE 750 +++R LF A+ A++ L++SY +++N E PSV + E Sbjct: 614 ---HKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELRENAKPKEHKPSVFLYE 667 >UniRef50_B5GJN9 ATP-dependent DNA helicase n=2 Tax=Streptomyces RepID=B5GJN9_9ACTO Length = 1129 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 62/545 (11%), Positives = 130/545 (23%), Gaps = 84/545 (15%) Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 L LL P+ + LR L + + G + Sbjct: 522 LDLLASPLC----GMDAADLRRLGRALRAEERAAGNPVPLPSD----------------- 560 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 +LL A+ + Y +++ + L+ +LL + L + W Sbjct: 561 VLLARALAEPERLIAHDAAYAKTARALGLLLARTRALLARGGTAEEALWELWNGTRWPAR 620 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 + + + + A+ + D Sbjct: 621 LERASRRGGAGGRNADRDLDAVCALFATAARAEERTGGRGALNFLAETEAQEIAADTLSG 680 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR- 709 V + T + + +++V + G+ +GV+P + G Sbjct: 681 RTVRP-DAVRLMTAHRAKGLQWRLVVVAGVQEGVWPDLRQRGSLLEADRIGSDGLAEPLT 739 Query: 710 -----DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 ++R LF A A +L ++ + +D PS + EL Sbjct: 740 RGALLAEERRLFYVAATRAADRLVVTAVKAPAEDGD--QPSRFLTEL---------GVEP 788 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 + L L DP+ + R AA G+ Sbjct: 789 QHLTVRPRRPLAVPALVAELRATTVDPRASPALREAAARRLARLAALTDGEGRPLVPSAH 848 Query: 825 P------------------FTLPETVPLETLQRFWA-HPVRAFFQMRLQVNFRTEDSEIP 865 P P + L + ++ F ++ Sbjct: 849 PGTWWGLADETVNEVPVRDPDQPLALSASALGQLVDVCALQWFLGREVRAEAPAS----- 903 Query: 866 DTEPFILEGLSRYQINQQLLNALVEQDDAERL----FRRFRAAGDLPYGAFGE--IFWET 919 + L + + L R L + A + E Sbjct: 904 -------TAQGFGNVVHVLADEVATGRSPADLDVLMERLDTVWDGLAFDAPWKSAQEREN 956 Query: 920 QCQEMQQLADRVIACRQPGQSMEIDLACN--------GVQITGWLPQVQPDGLLRWRPSL 971 +++ + R + + + ++I G + +V D R Sbjct: 957 ARAALERFLRWHVLDRAGRTPVASEHPFDVTLPAGEHEIRIRGTMDRVDADAAGRAYVVD 1016 Query: 972 LSVAQ 976 + Sbjct: 1017 FKTGK 1021 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 93/349 (26%), Gaps = 62/349 (17%) Query: 151 TGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQR---------FIETLESAT 201 G V L + A + L+E L R + F + + + Sbjct: 89 EGSPVRLLSGPEQDLAV--RELLEGETALSAEGRGRVRWPGQLRACLTTRGFADEVRAVL 146 Query: 202 TCPPGL---PSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLA 258 L P + P + A L +++++ D++ A Sbjct: 147 ARSRELGLGPDALHRFARRTGRPDWQAAAAFLAEYLDVL------------DLQGVIDYA 194 Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLE 318 +L+ R + S +A + LL + GR LL+ + Sbjct: 195 ELVHRADLLARRPDVARELAASYDAVYVDEYQDTDPAQVRLLDALAGQGRT---LLAFGD 251 Query: 319 SSQELDAFVDVTPDNLLH--------------------------NIQSDILELENRAVAG 352 Q + AF + +L + L R Sbjct: 252 PDQSIYAFRGADVNGILGFPDTFRTREGAPAPVRVLPAARRAARAVLDATRALTLRIPLT 311 Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 R+ ++ + H C SP E + + D LL + L D+ V++ Sbjct: 312 RLPAAAVRAHREQLPTREGGDVAVHTCPSPGAETDHVAD-LLRRAHLEDGLPWGDMAVLL 370 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRR-ARQSHPVLEAFISLLSL 460 + + +P + P ++ ++ L Sbjct: 371 R-----AGHRLPALRRSLTAAGVPIDTEGDELPLRLEPAVQPLLTALRA 414 >UniRef50_C4V2E5 ATP-dependent deoxyribonuclease subunit A n=2 Tax=Selenomonas RepID=C4V2E5_9FIRM Length = 1260 Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats. Identities = 63/482 (13%), Positives = 126/482 (26%), Gaps = 93/482 (19%) Query: 385 EVEVLHDRLLAML------EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 E + R+ ++ + L DI+V++ + + A + +P Sbjct: 571 ESHYIARRIKELVDAGYTVQSGKALRWSDIVVLLRGAKERA----VILMDALREAGIPSY 626 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 D + +SLL++ D+ + A+L P++ ++ E L LR Sbjct: 627 ADDTAGYFEASEIRMMLSLLAVLDNARQDTPLTAVLTSPMI----GMSMEELALLR---- 678 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 + + G L ++ + Sbjct: 679 --------------------------------------IHTPVGSIYDALKGADAEEVPP 700 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETEAAMTLIEQQW 616 + L + WRR A + E L + + + Sbjct: 701 AVRNKAKEALQTIRCWRRE-ALLHSVPELLWHLYRTSGYYDYVGALPDGILRQANLRMLI 759 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ--RFLAGPVNICTLMPMRSIPFKV 674 D L +R ++ V I T+ + + F V Sbjct: 760 DRAGD-FERTNERGLFRFLRYMDALQRRSTDLSAARTLGESEDVVRIMTIHRSKGLEFPV 818 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQK-------------PKRGD------------RSRR 709 V L + G + Q + ++ D R Sbjct: 819 VFLANI-AGAFNTQDISGDVLYHAHAGIGVRVYENTEIGRQKYDTLGRRSVKEVIRRETI 877 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 ++ + A+ AQ+KL ++ R+ + R + +L D+ Q G+ + Sbjct: 878 AEEMRILYVAMTRAQEKLILTGTLRTSRSGLSR-----LAQLRDFCQQYAREEGETFPDA 932 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP 829 A L D Q G REW ++ + + Sbjct: 933 AILGASCYLDWIALALMRHPDGQALMEGVEGIELREWSDEKARFAVRIEKADVRTSRSEE 992 Query: 830 ET 831 E Sbjct: 993 ER 994 >UniRef50_Q30SL2 UvrD/REP helicase n=12 Tax=Epsilonproteobacteria RepID=Q30SL2_SULDN Length = 692 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 57/423 (13%), Positives = 123/423 (29%), Gaps = 47/423 (11%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 IL L + + + + R D + + ++ Sbjct: 281 ILSLATKVIEHNERIYPKKLEVTRVHDSHPP--RLLAYDELFDQYHDIAFKI------SN 332 Query: 402 TLTPRD-IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 T TPRD I V+ + S + + + ++A + +L Sbjct: 333 TQTPRDEIAVIFRNNSSADGI-----EVGLRELGITCKRKGGTSFFDSREVKAVLDFYTL 387 Query: 461 PDSRFVSEDVLALLDVPVLAARFDIT---EEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 + + L + + + L + + + +G+ + Sbjct: 388 LINESDMMAFIHLFE-----FARGVGSAVAKELYLALKMLGHGSVFYGLYAPDESISNPF 442 Query: 518 ATGQHTWRFGL--TRMLLGYAMESAQGEWQS------VLPYDESSGLIAELVGHLASLLM 569 + + GL + LG + A+ ++ +L + + + A + L Sbjct: 443 EKRKLNQQLGLFDDFLELGSVGKFAKCGFEDKFMRNPILKHPKLTKENATFLHDFYLLYR 502 Query: 570 QLNIWRRGLAQERPLE--EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 L R + E + L+ + I + + + Sbjct: 503 DLKGVREPRVIVAKIAKSEIYKYIAEYLSNRRALLKDGTIDEKQKADSLSNIARKMVLLE 562 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 P S L + S VN+ ++ + + +K V ++ + DG +P Sbjct: 563 ELSK-PYSEHERFLNAMILGS--SDLTQGEGVNLLSVHASKGLEYKEVYIVDLMDGRFPN 619 Query: 688 QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 + LM + D++R LF A+ A+ LY+SY PS Sbjct: 620 RK------LMQRGG------SLDEERRLFYVAVTRAKDILYLSYAKYDKIKKLNFVPSQF 667 Query: 748 VQE 750 + E Sbjct: 668 LYE 670 >UniRef50_D0BK91 ATP-dependent nuclease subunit A n=2 Tax=Granulicatella RepID=D0BK91_9LACT Length = 1244 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 47/526 (8%), Positives = 130/526 (24%), Gaps = 106/526 (20%) Query: 380 HSPQREVEVLHDRLLAMLE---------------EDPTLTPRDIIVMVADIDSYSPFIQA 424 S EV + ++ ++ + + +DI+++ + I+ Sbjct: 546 SSASAEVHFIAGKIKELMANQFEIMHEESTKENPKKRPIQYKDIVILAPTKANNG-LIEE 604 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 +F +P + + +S L + D+ +++L ++ Sbjct: 605 IFTQY----QIPVLVQKNLQYFKRTEIAIMMSALKIIDNPTQDIPFVSVLRSGIV----G 656 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 + E L ++R+ ++ + + +E Sbjct: 657 LDEIALAHIRK----------------------NNKSCSFYEACVHFVEHFTLEEVNYY- 693 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 S +L + S L QL WR +A + + + N + Sbjct: 694 --------DSSQQQQLKERIKSFLDQLESWRD-IANHQSISTLIWQIYMDTNYLTYVHGQ 744 Query: 605 TE-AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPVNI 661 + L + + + ++ + + V + Sbjct: 745 SVGQQRVLNLHALYKYAKDFEDSSFKGLRNFVRFIQQMQHKKQDLEEPTQISDEEDAVRV 804 Query: 662 CTLMPMRSIPFKVVCLLGMNDG-----------------------VYPRQLAPLGFDLMS 698 T+ + + + VV L+ P ++ Sbjct: 805 MTIHASKGLEYPVVFLMNAGKKFNQQDIRQQAIRSDELGVGVKYLQLPERIQWTTI-PYV 863 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS------------IQDNSERFPS- 745 K ++ A+ A++KL I + D+ S Sbjct: 864 MAYKAEKNKLLSEEMRKLYVAMTRAREKLIIVGSLKDFDKFKEEHSMIEDIDDETLPYSL 923 Query: 746 -----VLVQELI--DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE 798 + ++ Q E ++ ++ + + T + + Q Sbjct: 924 RYHVDNYLTWILMATMRKQEKVSFHQEVIDFEQIKQNALNWIQETETTSINEVEWLQKQV 983 Query: 799 RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHP 844 + + + + + + ++R P Sbjct: 984 EGKPVKNLSNLLEDLKQTYPYLLASTTASYQ---SVSEIKRMNEEP 1026 >UniRef50_A4W0M7 ATP-dependent helicase/nuclease subunit A n=61 Tax=Streptococcus RepID=ADDA_STRS2 Length = 1227 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 72/703 (10%), Positives = 186/703 (26%), Gaps = 131/703 (18%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E+EV+ ++ + + +DI ++V +++ I ++F +P A Sbjct: 576 EIEVVAKEIIRL-HNEEGADFKDITLLV-QKRTHNDLIMSIFE----KHGIPIVADGGAA 629 Query: 445 RQ-SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 + + L + ++ ++ALL P+ F E+ L + ++G Sbjct: 630 SYLQSLEVMIMLDTLRVINNPLNDYALVALLKSPM----FRFDEDELTRI---SLQAGTG 682 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 + + + + +L Sbjct: 683 FFYQKMEIAQQASGQ---------------------------------HPELMSEKLKKK 709 Query: 564 LASLLMQLNIWRRGLAQERPLEE--WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 + L L WR A+ + + W + + A+ Sbjct: 710 ITDFLSILENWR-AYAKLHSIYDMIWKMFNEKFYYDYVGALPNGSKRQANLY----ALGL 764 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQER----ISQRFLAGPVNICTLMPMRSIPFKVVCL 677 + LS + + L ++ + + V + T+ + + FK V L Sbjct: 765 RANQFEKTGYKGLSRFIAMIDRALANDKDLADVQEFLPQNAVQLMTIHKSKGLEFKYVFL 824 Query: 678 LGMNDGV--------------------------------YPRQLAPLGFDLMSQKPKRGD 705 + ++ P+ + + Sbjct: 825 MNIDKRFNLEDHYQSVIISRKNGLGIQYLADMKDKVNSPLPQVRVLMNTLPYQNNLQELK 884 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSI---------QDNSERFPSV---------L 747 + + L AL A++KLY+ G + ++N S Sbjct: 885 IANLSEQMRLLYVALTRAEKKLYLVGKGNADKLAEKYDGKKENGVLAQSTRESMATFQDW 944 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 + + + + ++ LT ++ + E + A + L Sbjct: 945 ILAIDEAFSGEDLHFKKVFVTDEDLTEEKIGKLTLKSKLEDASLKDIRQSEDIAQALDQL 1004 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 + + + + ++ P +++ + P+ Q ++V + + + Sbjct: 1005 SSVQELNERYKAAIELPSLRTP-----SQIKKLYE-PI--LEQEGMEVMEKYQPKRTFNL 1056 Query: 868 EPFI----LEGLSRYQINQQLLNAL-VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQ 922 F + G +L+ L + E R A +I + Sbjct: 1057 PDFSKKPKITGAQVGSAVHELMQRLDLSWLVTEDTVRAALEAVHAEQAIKDKINVQMILD 1116 Query: 923 EMQQLADR--VIACRQPGQSMEI------DLACNGVQITGWLPQ--VQPDGLLRWRPSLL 972 R + + + ++ + G + + D ++ + Sbjct: 1117 FFDTDLGREILANTDKLHREAPFASLQTDSVSQENFVLRGIIDGYLLYDDHIVLFDYKTD 1176 Query: 973 SVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQ 1015 Q +QL + + + + L E+ Sbjct: 1177 KYDQPIQLSQRYQAQMQLYAEALKKAYKIDRVDCHLILLGGER 1219 >UniRef50_C0WLM5 ATP-dependent deoxyribonuclease, subunit A n=3 Tax=Lactobacillus RepID=C0WLM5_LACBU Length = 1254 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 49/400 (12%), Positives = 119/400 (29%), Gaps = 82/400 (20%) Query: 380 HSPQREVEVLHDRLLAM-----------LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 S + E++ ++ + LEE +T DI ++ ++ + Sbjct: 548 DSDSGQAEIIAQKIRTLVDDKQLIYDKKLEEMRPVTFDDIAIISPTHNN-----ELTLSD 602 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 +P I+ ++ ++ +SLLS+ D+ F ++A+L P++ + E Sbjct: 603 IFTQYGIPAEITGAKSYFKTTEIQIMMSLLSIIDNPFQDIALVAVLHSPIV----GLDEN 658 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L +LR I + L+ + G R+ Sbjct: 659 QLAFLR-------INRNTGNYYQAVLD--------FYRGFDRL----------------- 686 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE-WLPVCRDMLNAFFLPDAETEA 607 E + + + + QL ++ Q+ + W + + Sbjct: 687 ---EPNDYATRIYQKVDRFMKQLRRFKDVAQQDGLVSLIWDIYDQTGYLDYVGGMPAGLQ 743 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL-DQERISQRFLAGPVNICTLMP 666 T + A+ + + +R D + V++ T+ Sbjct: 744 RQTNL-HALYDRAADYEKNGFKGLFQFVKFIQRMQERDNDLANANPTTSENTVHVMTIHG 802 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPL----------GFDLMSQKPKR------------- 703 + + F +V L + + Q G D ++ + + Sbjct: 803 SKGLQFPIVFLNDVG-KQFNMQDTIGKYVLNDHWGIGIDYLNNQTREFRSPLQKQAILDM 861 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF 743 + ++ A+ A+Q+LY+ + + + Sbjct: 862 TKNAGLSEEMRKLYVAMTRAEQRLYLVAKVKGEKSGDNQQ 901 >UniRef50_UPI000196B4E2 hypothetical protein CATMIT_00994 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4E2 Length = 1181 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 77/721 (10%), Positives = 168/721 (23%), Gaps = 168/721 (23%) Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR------EVEVLHDRLL 394 + + +N + + + D+ I + + + E ++ +++ Sbjct: 504 EYIHGDNAILRYDFDAKGTTLPELEKNHDFDTDILISLYKNQEEYTKSEVEAHMVAQKII 563 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 +M ++ D V++ + + + VF ++P I+ + + Sbjct: 564 SM-KKLKDYKYHDFAVLMRATTEFITY-KKVFERY----HIPANITLSSGLFESNEVISM 617 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 ++LL + + +L++L L + F TE L +D + + Sbjct: 618 MTLLKALVNPYDDIAMLSVLHNNFLFSHF--TENEL---------------LDIRDADDP 660 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 HT + L + Sbjct: 661 LYINLTHHTNS-------------------------------------KVLHFLEVFDDL 683 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 R P E ++ F+ + Y L Sbjct: 684 RNTAMTSSPYETLKKCLKETGYQAFVSQLMNGEQRSANLDILLETFRTNEEYPY-----L 738 Query: 635 SLLRDELAQRLDQER-ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 + L Q V T+ + + F VV + M + Sbjct: 739 KDYLELLDSSSSQAPGFIASDENDAVEFMTIHKSKGLQFPVVFVSAM-QKKFNSSDENAE 797 Query: 694 FDLMSQKPKRGDRSRRD-----------------------------DDRYLFLEALISAQ 724 + G + + ++ + AL A+ Sbjct: 798 IIISQHDGVAGSVCKLEESPFGNIVCKYEHPYSKMLKMFIRQETVNEEMRILYVALTRAE 857 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 +KL ++ + +E+I Q D L + A + + Sbjct: 858 KKLILTGTIKDE------------EEIISIARQVQANDTDPTLKKGQGVVYNLAMRSTNN 905 Query: 785 TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF---- 840 + + Q + +P + L L RF Sbjct: 906 YLSWVLMALLRHKDFQEDIKILIPEIRPYLSLDRSSFKELENKD------TQLARFHCTI 959 Query: 841 -----------------WAHPVRAF-----FQMRLQVNFR-----TEDSEIPDTEPFILE 873 + RA+ F+ V R + + D F Sbjct: 960 LDSSETVQRIPPYAKIKIENQYRAYKKYYDFEYPYPVEPRSIAVTSMEEMKSDDTHFDFS 1019 Query: 874 -------GLSRYQINQQLLNAL-VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 R + LL+ ++DD E L + G + + Sbjct: 1020 NEGTRYLATDRGTLVHNLLSYFNFKEDDPEELIQSLYTNQMFDEE--GLSVLKNYLPHIN 1077 Query: 926 QLADR-----VIACRQPGQSMEIDLACN-GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ 979 + + Q Q + G+ I G V + + + Sbjct: 1078 DFINSDTYQLIKDADQIYQEKQFRYKDENGLIINGIFDLVFIKDNKVY-VLDYKTDRVSK 1136 Query: 980 L 980 Sbjct: 1137 D 1137 >UniRef50_A5UJ85 DNA helicase II n=1 Tax=Methanobrevibacter smithii ATCC 35061 RepID=A5UJ85_METS3 Length = 1505 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 66/605 (10%), Positives = 157/605 (25%), Gaps = 106/605 (17%) Query: 290 DGEQDVGNPLLASWGKLGR--DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN 347 D VG+ + +G G +Y LS+ + + + + I+++ Sbjct: 730 DSATFVGDIDQSIYGFRGSYDNYFEQLSNEYDVKRISLNTNYRST-------NQIIDVSE 782 Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 + + + +D I + E E + + + + E + Sbjct: 783 ALIKPQRDVHSE--KDLKGNRDIDFPIYYISNEDKDNEAENICEFIKYLKETGKIDNYNE 840 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 I V+ + S I+ + + +PYAI + +++ ++L+ S Sbjct: 841 IAVLTRSVTSNGNCIKP-LMNLLNENNIPYAIKGNKDLLDKDEIKSILTLIYYVISEDKD 899 Query: 468 EDVLA-----LLD------VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 ++ L+ ++++E L + + +V Sbjct: 900 HHIMNSWEKKWLNLKAFTDTDFKMKLCNLSDETKEILFNIQEQYENDVVAAEKDVSIEVT 959 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL-------ASLLM 569 + G+ + E+ Q + ++ L + + + Sbjct: 960 GKKSRVRSFGGVFKKYNKPEFENGQEILKDIVNKVSFPYLNVQNLEKWGIKNKDDLAFFD 1019 Query: 570 QLNIWRRGL-------AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ--WQAII 620 +L R + + + E ++ + F I + Sbjct: 1020 KLFEIRENILSEDIEYKNKLTILEIYMRLLEINDYFNADFINNPNNQDEISNLAFISNTL 1079 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 Y A+ + L ++ S V + T+ + + F VV + Sbjct: 1080 YNYEQMYYNKAIRGAFW--FLYTNIEDYGSSNVDP-NGVQLMTVHKAKGLEFPVVIVASF 1136 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRD-------------------DDRYLFLEALI 721 +D +P + D K + + ++ + A+ Sbjct: 1137 SDKKFPSKFISPNPDNGYIHGKPAFFTPYEFLKYKDFENESEEVLIHEEEENRIIYVAMT 1196 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 AQ L +S S P D+ + + L Sbjct: 1197 RAQDILVLS---------------------------SLVPPSDKENEITYKGSSLVEDLL 1229 Query: 782 CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFW 841 YA + K +P + +L+ + Sbjct: 1230 INKN----------------YAMSLQAKEIEIPKTV--CKKPDFEEELLELSFTSLKSYL 1271 Query: 842 AHPVR 846 P R Sbjct: 1272 QCPFR 1276 >UniRef50_B7RVB6 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RVB6_9GAMM Length = 869 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 83/671 (12%), Positives = 177/671 (26%), Gaps = 111/671 (16%) Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 D +L + I + + + +++I Q+E+ + ++D Sbjct: 168 DFDDLSPLQRSC--INHLASAVQELASAAGEATIQARSYADRQQELSAIARWAAQEYQDD 225 Query: 401 PTLTPRDIIVMVADIDSYSP----FIQAVFGSAPADRY-LPYAISDRRARQSHPVLEAFI 455 P + +++AD++ ++ F S LP S PV+ + Sbjct: 226 PDCSLG---ILLADMNGDRAPLEFLMRREFDSLGDKYNSLPVNFSTGITLDRAPVIRDAL 282 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 +LS+ D+L L++ D E + + +++ Sbjct: 283 RILSVCGETLPMTDLLGLVNSRFT----DCNEADSDRVVRLLHQ---------------- 322 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 L G+ G R L + S L + + Sbjct: 323 LFDDGEEQLNLGRLRFLSRSVKAGGEQGLAMGERLASCSELRLQRL-------------- 368 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAE--TEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 + +W+ D+L + P +E ++A+ V Sbjct: 369 -----TQRPSDWVKSICDVLGVWAWPGEGPLDSLEFQQVEAWYKALQEFSGLDSLAGRVN 423 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L + + + + + +PF + G+ +P P Sbjct: 424 FHTALGMLKRCCQNRISQPQTADSGIQVLGPLEAAGLPFDSIWFCGLQGNRWPAPSRPNP 483 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALI----SAQQKLYISYIGRSIQDNSERFPSVLVQ 749 F M+ + K + + + L +A + SY + D + PS L+ Sbjct: 484 FIPMALQRKHDMPHSSSEREWNYASTLTDQYRAACDRFIASYSRQ--LDGAPEVPSPLLG 541 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 L + + Q S + Sbjct: 542 AFP---------------------------LEHMEATVLIPEQWLAQASASSLEQNLNAQ 574 Query: 810 ASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE---IPD 866 A K+ ++ LQ+ P RAF RL + + D Sbjct: 575 APMVSKSEMSHIRGGSGI---------LQQQANCPFRAFASKRLLLEPLGDYRAGLSAAD 625 Query: 867 TEPFILEGLS--RYQI-----NQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET 919 + + L +I L +++ A A + G + Sbjct: 626 RGSILHDALYVLWGEINDSAALHALGREALDEKIASASAAAINAVPESVRLLVGMHCLDL 685 Query: 920 QCQEMQQLADRVIACRQPG-------QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLL 972 + Q +Q+L + + + ID + ++ + +V Sbjct: 686 ESQRLQKLMTQWVQLELARNPFKVVAREEPIDFKLGELSLSLRVDRVDELEDGSRIVIDY 745 Query: 973 S-VAQGMQLWL 982 + WL Sbjct: 746 KSGRSSLADWL 756 >UniRef50_A7BEI4 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BEI4_9ACTO Length = 1142 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 101/874 (11%), Positives = 207/874 (23%), Gaps = 166/874 (18%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 PA L R ++ + + LF VG+P A +G G L Sbjct: 252 PAVRESLREEFRAVLLDEFQDTSVIQMDMLSMLFGDHAVTAVGDPNQAIYGWRGASASSL 311 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSD--ILELENRAVAGVNIEEFSRSDNKR------ 365 S L+ Q +A + L ++D IL+ NR A + + + Sbjct: 312 ESFLDRFQTGEA-QESQTLTLSTAWRNDEAILDAANRVAAPLREVAAYQEGKEHLKAQSP 370 Query: 366 ----PLDPLDSSITFHVCHSPQREVEVLHDRLLA-MLEEDPTLTPRDIIVMVADIDSYSP 420 + + + + D + R + V+ ++ Sbjct: 371 VLVARDGAGPGHVDVAYAPDYEAALGAVVDFARSVRSHASEGGKRRTVAVLCRRRKDFA- 429 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 ++ A A D +P I P ++ + L L S + LL Sbjct: 430 YVDA----ALRDAGIPTEIVGLGGLLDQPAVQDVRAALELAYDVEASPWLARLL------ 479 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 D+ L L W G + +++ Sbjct: 480 VGIDLGATDLMALGDWSRVLARTEGTNPHQ-----------------------AVLLDAV 516 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + + + E V + L +L R G+ + + + + Sbjct: 517 DSPPEPGWAAEGRPAISEEAVRRVRLLGERLRQVREGVGRSVTEQVERAILIMGTLDDVI 576 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ-RFLAGPV 659 D + +++ A +R D V Sbjct: 577 ADPLSMGGRAALDEFIAVTAAYEKDTPGASLGSFLAYLRMADEREDGLEAPLGEPDPRAV 636 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ---------------KPKRG 704 I T+ + + + V + G++DG++P + + P RG Sbjct: 637 QIMTVHASKGLEWDCVVVFGLSDGIFPSHDKRKTVSWLDEPPIATAWLTDAGALPHPLRG 696 Query: 705 DRSRR----------------------------------DDDRYLFLEALISAQQKLYIS 730 DR+ ++R L A+ A+ + Sbjct: 697 DRADLPPFLLDVEGESKPSAAYSKWVKGHYGRSLGVHAEREERRLAYVAMTRARSIQLLV 756 Query: 731 YIGRSIQDNSERFPSVLVQE----------------LIDYIGQSHYLPGDEALNCDESEA 774 ++ R PS + E L+ + + GD ES + Sbjct: 757 GSWIYRTGSTTRQPSRYLMEARAQLFGDAPDLVDDTLVRVGDRGVWARGDWRSLGIESVS 816 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPL 834 L + + E P+ + A + + Sbjct: 817 GAGVCLIAPEPGDEDIVDSGAGAASVFFPEEPGPSRQRVAAAAQAVEAQIRDLAQDQDVY 876 Query: 835 ETLQRFWAHPV-----RAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR------------ 877 E L + P+ + L + D + L + Sbjct: 877 EALAQLGDDPLVRDTVALIEEYHLGLETPVVDLWAERVPATSVSALLQDADEFARDMRRP 936 Query: 878 -----------YQINQQLLNALVEQDDAERLFRRFRAAGDLP----------YGAFGEIF 916 + + + A+ A + Sbjct: 937 MPARPSSFSALGTVFHAWVERELHLASADPASEITTGNEVSAGEDATLAGGDDAADEALL 996 Query: 917 WETQCQEMQQLADRVIA--------CRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWR 968 + + + +++L A R + GV + G + V Sbjct: 997 TDGERERLERLRANFRAFVANELSDYRAVAIEEAFSVQVGGVSVQGRIDAVFERVRGDG- 1055 Query: 969 PSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRK 1002 + W A+ + F+ + Sbjct: 1056 -----PRYLVVDWKSGRPVSAATKPDKVAYFVTQ 1084 >UniRef50_B0PD60 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PD60_9FIRM Length = 1174 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 79/645 (12%), Positives = 159/645 (24%), Gaps = 132/645 (20%) Query: 378 VCHSPQREVEVLHDRLLAMLEEDP---------TLTPRDIIVMVADIDSYSPFIQAVFGS 428 S Q E + +++ MLE + P DI V++ + QA F Sbjct: 529 ELDSTQLEARDVAEQIAGMLERGDLVADGGVTRRVRPSDICVLLRSPAQKA---QAYF-D 584 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A R +P + + + ++LL + + + D + L P+ F +T + Sbjct: 585 ALTRRGVPVWAEPKSGFLTSREIAPVVALLRVLGNPTLDIDFASALLSPL----FGLTAD 640 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L +R R Y + E Sbjct: 641 ELTQIR--------------------------------LTDRRAPLYIAAAKAAEAGDPR 668 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + + + L A + + + + + Sbjct: 669 AANAV-----DTIARLRRF-----------ASNATADAVIRRIYEECDYMGKV--QAMRM 710 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE-----RISQRFLAGPVNICT 663 ++ G LS + + +D+ S A V + + Sbjct: 711 GQARRANLLLLVQYACDYHAGGYKGLSGFIGFVDRLIDRGGDFAPAASMSEQADVVRVMS 770 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL-----------------------MSQK 700 + + + F VV L + R+ L M Sbjct: 771 IHRSKGLEFPVVFLCD-TAKRFNREDLNGNTLLHSELGFACVRRDFELMKQYTTVPMQAL 829 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR------------SIQDNS-----ERF 743 +RS ++ + AL A+Q++ I+ + S D R Sbjct: 830 RLELERSMLSEELRVLYVALTRAKQRIVITGVVTKPEELLCALVSESGTDGKLPPHQVRG 889 Query: 744 PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA 803 + + ++ H + +A LT + + + A Sbjct: 890 ANAYLDWIL-MAAARHPALAERFGLAGAPLDASEAPLTFELKAAADGEPDAEKTSETTAA 948 Query: 804 REWLPAASQAGKAHSEF-VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 A + + +P + + L R Sbjct: 949 SPDEAALEALRRRLAFRYPFEAQTKIPTKMAVSQLAG-----SAYAASYRFSARPAFLQG 1003 Query: 863 EIPDTEPFILEGLSRYQINQ---QLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET 919 + L G R Q + DA R G L I + Sbjct: 1004 D-------GLTGAQRGNALHKFMQFADYQAAARDASGEIARMAREGFLSRQEADSIRPDR 1056 Query: 920 QCQEM-QQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDG 963 +LA R+ + +Q + + ++ G + +G Sbjct: 1057 VRAFFSSRLAARIFSAKQVWRELRFLAEAGEREL-GAYSALFTNG 1100 >UniRef50_B6JCP8 Double-strand break repair protein AddB n=15 Tax=Bradyrhizobiaceae RepID=B6JCP8_OLICO Length = 1066 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 103/881 (11%), Positives = 227/881 (25%), Gaps = 129/881 (14%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPL-WKALVEYTHQLGQPRWH 185 L+ A L D + R W + + Q W+ L + + Sbjct: 152 LADDLARLIDD-MTTRG---VDWHALNTLVPDDLDQYWKITLDFLKIASEAWPAHLRESE 207 Query: 186 RANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCR 245 R + + P G + P + L A+ +H + ++ Sbjct: 208 LIEPVARRDLLIAAEAARMAAAPGPFIAAGSTGSMPSTAKFLHAVAQHPQGAVVLP---- 263 Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGK 305 D+ D A+ + + R + E PL + A + LL +G Sbjct: 264 GLDTDLDDEAW--RAIGGVRDSTGRFAEHPLSSHPQYAL------------HGLLDVFGV 309 Query: 306 LGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKR 365 R + L++ + + + + D Sbjct: 310 D-RKAVRALAEPSAHGRELIASEA---------------MRPARETAQWHHRLADPDVTT 353 Query: 366 PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV 425 ++ ++ +P+ E + + + T ++ D + Sbjct: 354 RIEAGFDNLAIVEAANPEMEALAIATAMREARQFGKTT-----ALVTPDRA-----LARR 403 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV--LAARF 483 +A LPY S + P S +LALL P+ L A Sbjct: 404 VMAALGRWQLPYDDSGGDSLMDTPAGIFARLAAETVTSELAPPTLLALLKHPLLRLGAPA 463 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 + L V G R ++ + + L + A+ Sbjct: 464 GGWTKATANLELAVLR-GTRPAPGCKGLQAAFAAFVEEWSKTQRKELSTLHPSEPRARLT 522 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE-RPLEEWLPVCRDMLNAFFLPD 602 + + + + L S++ + + + + ++ AF D Sbjct: 523 PDDIESATRALDALVSALAPLESVVRGTHDFATLAQRHYETITHLSRDNDGLIAAFAGTD 582 Query: 603 AETEAAMTLIEQQWQAII---AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP- 658 + + + + A A+ + D A + + + Sbjct: 583 G------QQLASAFNELAPPNENDVPAPTHIALEAADYPDLFATAFANRVVRRPENSDAA 636 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 + I L+ R V L G+ +GV+P + + + G +R + L Sbjct: 637 LRIYGLLEARLTQCDRVILGGLVEGVWPPAPRIDPWLSRPMRHELGLDLP---ERRIGLT 693 Query: 719 A-----LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 A L+ A++ + I++ + + S + + G + ++ Sbjct: 694 AHDFAQLLGAKE-VIITHATK--VGGAPAVASRFLHRMKAIAGTKAWTEAEKR------- 743 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP 833 G E L A P P + Sbjct: 744 -----------------------GADYVRYAEALDAPDSITPVAQPAPTPPVALRPLQMS 780 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD 893 + ++ + P F + L++ L R L ++ Sbjct: 781 VTEIEDWLRDPYTIFAKRILKLTLLDPVDLP-------LTAADRGSAIHNALGDFTQKHS 833 Query: 894 ---AERLFRRFRAAGDLPYGAF------GEIFWETQCQEMQQLADRVIACRQPGQSM--- 941 E + R G+ + A ++W + A + R + Sbjct: 834 KTLPEDIVAELRFCGEEHFAALMAHPEARALWWPRFLRIADWFAGWELRRRAETVEIAAE 893 Query: 942 ---EIDLACN---GVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 EI + +++ +++ + Q Sbjct: 894 QRGEIAIPLGDGREFRLSARADRIELRADRTFAIIDYKTGQ 934 >UniRef50_C8X4N8 Putative DNA repair protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X4N8_DESRD Length = 913 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 100/828 (12%), Positives = 196/828 (23%), Gaps = 153/828 (18%) Query: 240 FTNPCRYY--WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 P + W D + + L + RE + Sbjct: 88 LLTPAQELAVWEDAVQQSPEGRRLLNAGAAARSAREAWQLWQEYCLNEEAIQAEAGPDTE 147 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA-------- 349 L W RD L+S + + LL + DI E A Sbjct: 148 AFLG-WAAAFRDRCRKRQWLDSGR-----LPRALRGLLAQGKGDIPEEVTLAGFDLVSPM 201 Query: 350 --VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 + E + S + C ++E++ +LEE ++ Sbjct: 202 QQELVQTLSEAGCPVWVLQPQEVQSRVACVPCADARQEMDDAARWARELLEESASIR--- 258 Query: 408 IIVMVADIDSYSPFIQAVFGSAPA-DRYLPY--------AISDRRARQSHPVLEAFISLL 458 I ++V ++ + + + +R LP+ +S V + LL Sbjct: 259 IGIVVPNLQAVREDVLEALEAVLEPERLLPWGGDTPSCINVSLGGPVAETAVGRCALGLL 318 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 L + F +ED ALL R W Sbjct: 319 RLGRTTFKTEDFGALLRS-----------------RHWA-------------------GG 342 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + R L + E L +L L Sbjct: 343 ESEWAARAELEAAVYAVGEPQWTRTLAEFFLARHGETDCPETARALHRFWARL----DDL 398 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMT-LIEQQWQAIIAEGLGAQY-GDAVPLSL 636 +++ +W ++L + P A + + + + WQ + + Sbjct: 399 PRKQSWSQWAETFGEVLRSVGWPGASGQPSASYQAVEAWQECLEGLEQFDQVLEPAGYGE 458 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 L Q + PV + L+ F + ++G+ D V+P P Sbjct: 459 ALQRLEQLARETLFQPESGHHPVQVLGLLEAAGSRFDALWVMGLTDEVWPPAARPHPLLP 518 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALIS----AQQKLYISYIGRSIQDNSERFPSVLVQELI 752 + + F + A ++ S R + E PS L+ + Sbjct: 519 HALQIHSDMPHCAAQRELRFARQVTHRLSTAAPEVVFSLPQRDG--DRELQPSPLLADHP 576 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 I + LP ++ + H G + + L Sbjct: 577 R-IARDELLPTTVPSLWEQLGQAAEPHWELDEGAPALVEGTRLRGGTGTLKAQAL----- 630 Query: 813 AGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL 872 P +AF + RLQ + Sbjct: 631 ------------------------------CPFQAFGRFRLQAAAVRPPEP-------GI 653 Query: 873 EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE-----------------I 915 L R + + L + + A G Sbjct: 654 TALERGNLVHKALETFWAEMQTRERLQGASAETIAATARKGAQKGVEQLAERRPMTLTGR 713 Query: 916 FWETQCQEMQQLADRVIACRQPGQSM-------EIDLACNGVQITGWLPQVQPDGLLRWR 968 E + + +L ++ A ++ + G ++ +V R Sbjct: 714 HRELEEDRLTRLLEQWAARELERTPFAVVEREHRVEASFAGARLRIVCDRVDRLDDGRLA 773 Query: 969 PSLLSVAQ-GMQLW-------LEHLVYCASGGNGESRLFLRKDGEWRF 1008 + + W + +Y + +F+ + Sbjct: 774 VVDYKTGEIRVSDWFAPRLLEPQLPLYALLAETEVAGIFVARIKTGHL 821 >UniRef50_B4S6V4 UvrD/REP helicase n=2 Tax=Bacteroidetes/Chlorobi group RepID=B4S6V4_PROA2 Length = 984 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 75/582 (12%), Positives = 156/582 (26%), Gaps = 121/582 (20%) Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV 350 VG+ + +G G D ++ F P+ H + ++ Sbjct: 253 SLFVVGDDDQSIYGWRGADVRNIIE----------FDQRYPNCSTHTLSTNFRSTNTIVS 302 Query: 351 AGVNIEEFS---RSDNKRPLDPLDSSITFHV---CHSPQREVEVLHDRLLAML------- 397 + +K P+ D +I + Q E E + +R+ +L Sbjct: 303 TSDRFIQHQLSTARIDKAPISNSDGNIQHFGNLWFRTKQDEAEWIANRINQLLGTKYIET 362 Query: 398 -EEDPTLTPRDIIVMVADI-----DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVL 451 + LT D +++ + + +P+ + + +A + + Y I + Sbjct: 363 DGSERGLTKSDFAILMRSVQGGTRNGGAPYHRD-YTNALSKADINYIIEAEGSIFERLHA 421 Query: 452 EAFISLLSLPDSR-FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 +SL S + + + + +L L + + + Sbjct: 422 RTLRDAMSLLRSPGYPRREAINFFNSNILPV---FPNADLNKFLEILAD----------- 467 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 W + R + G + + LL Sbjct: 468 -------------WNNQIHRPIGGARRKVYPQLL-------------------VHELLEA 495 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFL--PDAETEAAMTLIEQQWQAIIAEGLGAQY 628 I + L V ++ +T + + + Sbjct: 496 FRISTTEFQNHEQVMRDLGVFSGIILDVEKVFVSIDTGQRYQSMLNFLENVAE------- 548 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 D ++ V I T+ M+ + F VV ++ + +P + Sbjct: 549 --------------SGYDTTQVELMSRPDAVTISTVHKMKGLEFPVVFIVDVVQQRFPGK 594 Query: 689 LAP----LGFDLMSQKPKRGD-RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF 743 + L +L+ RG +S + LF AL A++ LY++ + Sbjct: 595 RSSYNGWLPLNLIQNPLSRGLYQSNIFGEARLFYTALTRAERFLYVTGSSIQPGLQRPKN 654 Query: 744 PSVL------VQE---------LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP 788 PS + + L D I + P + + S +K +L C Sbjct: 655 PSPFKLIIQGLNDPEVITDTTHLPDNIERIEQRPRIDEESMPTSFTEIKDYLECPMK-YK 713 Query: 789 FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE 830 F L + +AH F P Sbjct: 714 FRKIYGYSPAVPELFGYGLTTHTAINRAHQLFANAAPTREEA 755 >UniRef50_A6WGC7 ATP-dependent nuclease subunit B-like n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WGC7_KINRD Length = 1045 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 81/702 (11%), Positives = 178/702 (25%), Gaps = 97/702 (13%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 + E + + + V P+ EV + +LA L+E+P P Sbjct: 222 DAQDTAWAAELLGQQVAPPAEGAATAYVDLVVAPDPEEEVRLAVRSVLAHLQENP-ARPD 280 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 I + ++ + + LP+ + +R I LL L + Sbjct: 281 RIGIAFTSSRPFARLL----AEQLSTAGLPHHVPGQRTLAQTVAGRTLIGLLELHRRGYP 336 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN--VRELELPATGQHTW 524 DV A L T + +G G+ + E Sbjct: 337 RADVSAFFASGPLLTADG-TYVPASTWERVSRTAGATRGLSTWRQRLDRFEQQGPRHTGD 395 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 + ++ ++ + + A L R L R + Sbjct: 396 EESIRQVAAARSLRLTLDGLAAAAEAALGAPTWAHAAEALR------VALRVCLGDRRSV 449 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 + W L + + A+ + G + +RD + Sbjct: 450 DGWTLRAEADLQRAVELEQQAHDAVDTALGALAQL------DATGQGPDAAAVRDAVTDA 503 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR- 703 L S L + + + ++ +LG+++ P + + + Sbjct: 504 LGTAAPSATVLGRGILVGPVREFAGADLDLLLVLGLSEDAAPARQREHPVLRDADRELLS 563 Query: 704 ----GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 SRR D++ A + ++ +S + + +F S E + Sbjct: 564 PDLATLASRRADEQR-AWRAALRTAPQIVLSCARANSRTQRRQFASPWFLE-QASLRAGR 621 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRM--------------------PFDPQNYQPGER 799 + E + + ++++ + + D Sbjct: 622 PVGAGEVDSPGSALPGLRSYDSFVDALDRGGEFTSVHELDAARTVLAGAVDELAAADPRL 681 Query: 800 QSYAREWLPAASQAGKAHSEFVQPLPFTLPETV----PLETLQRFWAHPVRAFFQMRLQV 855 Q A + + LP L E V +L+R+ P R F+ L+V Sbjct: 682 QRGLVAARARARGEFGPWTGGTEELPEGLRERVDRGHSATSLERWATCPARHLFRDVLRV 741 Query: 856 NFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ------------------------ 891 E + R + +L + Sbjct: 742 -----GRLEEAAEHDSVSPADRGSLLHDVLEEFLRPHLGTPEQPGRSPDAAWTPEEVQAA 796 Query: 892 -DDAERLFRRFRAAGDLPYGA-FGEIFWETQCQEMQQL--ADRVIACRQPGQSMEIDLAC 947 D + R G L + +++ L AD + + ++ A Sbjct: 797 LDLLDTHVARLERRGGLGRHPALWPVQLRELRRQVADLLAADSARRAAERSWPIAVEAAF 856 Query: 948 NG-------------VQITGWLPQVQPDGLLRWRPSLLSVAQ 976 ++++G + ++ + Sbjct: 857 GDEDALVLDLPTQGALRLSGRIDRIDATAAGGLVVQDYKSGK 898 >UniRef50_O26611 DNA helicase II n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26611_METTH Length = 683 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 69/537 (12%), Positives = 155/537 (28%), Gaps = 79/537 (14%) Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 + + Y + + L + R + + + D + + D QD Sbjct: 174 MTVAEAYQRYLNLMDENGLLDFAGMQWRVVRLLENDSKILDDLRSRYRFLMVDEYQDTNQ 233 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHN----------IQSDILELEN 347 L + + + + Q + F TP+N L ++ + + + Sbjct: 234 IQERFLELLAGEECNIFAVGDEDQSIYGFRGSTPENFLGFQKKYGAEVVMLEKNFRSVPS 293 Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSP--QREVEVLHDRLLAMLEEDPTLTP 405 + R K DS + +P Q E + + A++ D + P Sbjct: 294 IVDVTQRFMDGYREYPKDIRPVRDSENRVFILDNPTHQDEPSNVVGIIRALV--DHGVIP 351 Query: 406 RD--IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 + ++ + + I + +P+ + + + LL + Sbjct: 352 HQGYVTLLFRSVKHDAVEI----MNELRREGIPFNVYGEGGFFDREEILYIMHLLH--HT 405 Query: 464 RFVSEDVLALLDVPVLAARF-DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 R ++ L L F D+T + + L++ Sbjct: 406 RNERRKIIRKLKYEHLEGEFMDLTPGSVNRI--------------------LDMDEEELR 445 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 R G+ + L +L ++ L + Sbjct: 446 GLREHREFRGAGFTDPDD--------------------IRKLVALNRLIDSDLGVLERYY 485 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 + E +L + ++ ++I + V L + + Sbjct: 486 EILELTEYPHRLLER----GDDESREKLYNLARFSSLIKDYERISLEPGV--EGLMEFIR 539 Query: 643 QRLDQE--RISQRFLAG--PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ-LAPLGFDLM 697 + + Q L VNI T+ + + F VV + + +G +PR+ +L Sbjct: 540 MAMSGRIKKYDQILLDNPYSVNIMTMHRAKGLEFPVVIICSVFNGKFPRKVRERSELELP 599 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG-RSIQDNSERFPSVLVQELID 753 + + R+ ++R LF + AQ L +S + S +++LI Sbjct: 600 EELRRSTMRTDEIEERRLFYVGMTRAQDMLIVSATKNHRGRIGY----SEFIEDLIK 652 >UniRef50_A7HKE9 UvrD/REP helicase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HKE9_FERNB Length = 1130 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 85/777 (10%), Positives = 211/777 (27%), Gaps = 132/777 (16%) Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS 373 L + + D + L + DI + + I + + S Sbjct: 416 LHEAFRLRYRDLYDK------LWFLDEDISNAHIKKLESEVIPQIDFLNESISRVSYLSI 469 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEED-------------PTLTPRDIIVMVADIDSYSP 420 ++ SP+ E ++ + ++ ++ + +DI ++ + Sbjct: 470 VSLDEKVSPEDEANLVAMAIKNLVGKEITIFDKEKNDYVTRKVEYKDIAILSYKLAG--- 526 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL- 479 I++++ +P + R P + A IS LS+ + + + P + Sbjct: 527 -IESIYRETFGKFNIPLYVVKGRGFYKRPEIRAVISALSVIQNPNNDYNFVEFFLTPFVE 585 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + F + + + L + V + + ++ ++ + Sbjct: 586 STDFSPSFDKFKILHKIVLNA------------RKLRENGERISFFQSAKKLGKEDLPDY 633 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 + V YDE L + + + + L++ + L + +L Sbjct: 634 VSEMIELVQKYDELKYF-LRPAEVLKGFINE-SYYLAKLSKFPNSVQRLKNVKKLL---- 687 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 + + +I + S + +E V Sbjct: 688 ----DQATEFNQQASTFSELIRLLSKVEELQETEASEVSEE---------------DNVV 728 Query: 660 NICTLMPMRSIPFKVVCLLGMN-------DGVYPRQLA--------------PLGFDLMS 698 + T+ + + + +V L+ N + +P F++ Sbjct: 729 KMMTVHASKGLEYNIVFLVNNNFNEMESDEVFFPSDDNGGRYIHIKRFIENYKDKFNINK 788 Query: 699 QKPKRGDRSRRDD----D---RYLFLEALISAQQKL-YISYIGRSIQDNSERFPSVLV-- 748 + K+ + + A+ A++ L ++Y S + + + Sbjct: 789 DEYKKLKGELEAELIYDETEILRKIYVAITRAKEMLFVVTYNTNSSRGKRGKTAGQYLAH 848 Query: 749 QELIDY-IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 E I + ++L+ E L + + Y L Sbjct: 849 NEFKTITIDKKQIDEMVKSLSISEFSGEENKKLLDEEKIRKQIED-FSNIGYKRYISPTL 907 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 K+ E V L E +PL + Q L++ + ++ + Sbjct: 908 LYNITDEKSDKELVNELEVDFEENMPL--FEGQEK-------QDILKIFEKNQEKQKRSK 958 Query: 868 EPFIL---------EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWE 918 L + + + L ++ D L R G+LP + Sbjct: 959 SEVSLLLSSLLETSREVIEGKNIHRRLMSVQRYPDLLNLVER----GELPEKILKADVIK 1014 Query: 919 TQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDG----LLRWRPSLLS- 973 + ++ + + + + G +V ++ ++ S L Sbjct: 1015 YLFENSDKVISEWR------IAKSVVIDGKKYTLFGVPDRVFFKDGKIYVVDFKSSYLKD 1068 Query: 974 -----VAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIE 1025 QL + G L + G + + L++LI Sbjct: 1069 GSEEVEKYKFQLQFYMYMLKDFGEIAGGYLVGARSGFVIRVERPGDDFIELLAKLIR 1125 >UniRef50_C4G2E3 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2E3_ABIDE Length = 618 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 49/466 (10%), Positives = 129/466 (27%), Gaps = 94/466 (20%) Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLL--HNIQSD---------------ILELEN 347 K+ + + + Q + F P+ +L I D IL Sbjct: 224 KMSKPLNNIFIVGDDDQSIYRFRGAKPEIMLGFEKIYPDCKKVLLNENYRSTESILNFAG 283 Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 + + + + I + E + ++ + + + Sbjct: 284 SVIHKNKQRFDKKIIAAKGVRGNLPVIK--SFTDRRTEDTAIVKDIIK--SHEAGIPFSE 339 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD-RRARQSHPVLEAFISLLSLPDSRFV 466 + ++ + P + + +P+ + + + +H + + + L + + Sbjct: 340 MAIVYRTNIAARPVVVK-----LIEYNIPFIMKEMAPSIYNHFIAKNIMDYLEIANGDRA 394 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 L +++ P +T E L D + + ++ W Sbjct: 395 RSRFLNIMNRP----NRYLTRESLA---------------DAVVLNKDKVEYVSFIKWTA 435 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL--LMQLNIWRRGLAQERPL 584 ++ E + + LA L ++ R+ + ++ L Sbjct: 436 A----------------YKGRNWMAERINTLQFHLAKLAELSPFGAIHYIRKVIGYDKFL 479 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 ++ R + E + Sbjct: 480 TDYADE-RHIDADELFEILEEIEEAAKPFNTLKEWKESIEDFNKKQKEEFEK-------- 530 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 ++ V I T+ + + F+ V + + +G+ P K Sbjct: 531 ------NKNTDRDAVVISTMHGCKGLEFEKVYIPEVVEGIIP-------------YKKAI 571 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 +S +++R LF A+ A+++L I+Y ++ S ++E Sbjct: 572 RQSDIEEERRLFYVAITRAKKELMITYPKN--LYGKDKEVSPFLRE 615 >UniRef50_A0L697 DNA helicase/exodeoxyribonuclease V, subunit B n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L697_MAGSM Length = 916 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 100/791 (12%), Positives = 195/791 (24%), Gaps = 165/791 (20%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIY 312 L +L+ ++ + ++ + LLA WG Sbjct: 89 KARELPRLMNGEQERLIWSAVVRQSEVGQSLLSPHGAAEGARQAWVLLAQWGV----TQE 144 Query: 313 LLSDLESSQE------LDAFVD-VTPDNLLHNIQ-----------------------SDI 342 LL + ++A+ + + LL Q D+ Sbjct: 145 LLRQQPEPETQVLLQWIEAYQQRLQREGLLDAQQLSSQLLSRAACWQPPRQLIVAGFDDV 204 Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 + + E + P S+ ++E+ + + LE Sbjct: 205 SPQMQHFLQVLAGEHGVMVNQWLPEPLQPHSMQRWGFADQEQELLAMARWVRQQLEAGV- 263 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPAD---------RYLPYAISDRRARQSHPVLEA 453 R+I V+ ++ + + + LP IS A PV+ Sbjct: 264 ---RNIGVVAPNLPEIKSGLARTLAAVLTPGFDRPHSPPQPLPVNISSGSALAHTPVVAD 320 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 + LL + ALL P + + L + G R Sbjct: 321 ALLLLHFLQEPLLPAAWAALLRSPYFSGGEK-GRDSRGALEAKLRALGCFSLNVTQMCRL 379 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 LE +++W + R+ Sbjct: 380 LETHKRSENSWYERINRLAQL--------------------------------------- 400 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE--AAMTLIEQQWQAIIAEGLGAQYGDA 631 L + PL W L P + + W+ ++ + ++ Sbjct: 401 ---ELDKALPLGRWAARVSRWLELMGWPGTDRALDSREYQAVSAWRDLLTQWAALEHTAP 457 Query: 632 -VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 +P L + PV + ++ F + LL M D +P Sbjct: 458 ALPWESALGLLQGMALRRDFQPDGGEAPVRVMGVLESAGERFDALWLLDMRDEQWPPAPM 517 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALI----SAQQKLYISYIGRSIQDNSERFPSV 746 P F ++ + + G + F + A + + +S+ + + S Sbjct: 518 PNPFLPLALQRQWGMPRASAERELTFARQITQRLRQAAKTVVVSWCRSDG--DRDFLISP 575 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN-YQPGERQSYARE 805 L +L A +T P D Q G Q+Y Sbjct: 576 LWSDLP------------------------LAPVTASPPDYPLDAQLIAAAGRWQAYDGA 611 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 + ++ L + P +AF RLQ Sbjct: 612 ASIPLTCPPQSVLPGGAALVKNQ------------ASCPFKAFALHRLQAKGLEVTVPGA 659 Query: 866 DTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAG---------------DLPYG 910 D R + +L + +E R+ R A G Sbjct: 660 DD-------RRRGTLAHVMLEKFWKTVQSEANLRQARIAQRQQWVAQAVAAALQKWTVQG 712 Query: 911 AFGEIFWETQCQEMQQLADRVIACRQP------GQSMEIDLACNGVQIT-GWLPQVQPDG 963 F + + Q M + D +A ++ +A +++ L ++ Sbjct: 713 DFAGLEQQRLQQLMARWIDVELARAPGFVVEVAEDPQKLAIAGATLELRLDRLDRLADGR 772 Query: 964 LLRWRPSLLSV 974 L Sbjct: 773 HLLIDYKSGQP 783 >UniRef50_A6SVL7 Uncharacterized conserved protein n=2 Tax=Oxalobacteraceae RepID=A6SVL7_JANMA Length = 892 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 73/649 (11%), Positives = 163/649 (25%), Gaps = 123/649 (18%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 N A E ++ + H+ + E + ++ L++ T Sbjct: 247 NTTYAAAWPEMLDDVVPADLPLATPPGLSLYAAHNLEAEAKAGAQTIMDWLQQGKT---- 302 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 +I ++ D + + + A + A S L L +R Sbjct: 303 NIAIVAQDR-----VVARRIRALLERAQVIVADETGWKLSTTRAAAALASWLELVAARAE 357 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 + +L L P + A D + + + + + G Sbjct: 358 TIALLDFLKSPFVFANTDNKADLVMASELALRRANVLGGW-------------------- 397 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 E G ++ +++ L G ++ + L + Sbjct: 398 -------------------------ELVGDALTVIPAAQNMVKLLAQQATGFSKGKTLCD 432 Query: 587 WLPVCRDMLNAFF-LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 W+ + L+A + + A + Q Q I + + + R L +L Sbjct: 433 WITASQQTLDALGMRGALQADGAGAQVLQLLQDIEQDCTAVGH--VFSFAEWRAFLNLQL 490 Query: 646 DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 + Q V + L R F V L+G + P Q F + + G Sbjct: 491 EATAYVQLNRDRRVVMLPLNGARLRSFDAVLLVGADAEHLPSQPTETLFFANVVRRELGL 550 Query: 706 RSRRDDDRYLFLEA--LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 +R R + L++A +++ +S+ ++ S ++ L + ++ Sbjct: 551 ATRESRQRQQLRDVTELLAANEQVLMSWQAH--KNGEPNPVSPWIERLELSLARAGLPKI 608 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 LT Sbjct: 609 ARHHVGIAPRHLTPVPLTMPAP-------------------------------------H 631 Query: 824 LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 P + A P + F L ++ E S++P+ Q Sbjct: 632 AAALRPHKLSASGYNSLVACPYQFFATRMLGLSGLDELSDMPEK-------RDYGDWLHQ 684 Query: 884 LLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET-----QCQEMQQLADRVIACRQPG 938 +L + L R ++ FG ++ Q+ + Sbjct: 685 ILAIFHTRLHEVTLAGRATLLREISDQVFGLALDKSAAALGYYARWQKAMPAYLEWLAER 744 Query: 939 QSMEIDL-------------ACNGVQITGWLPQVQPDGLLRWRPSLLSV 974 ++ + + G + ++ + Sbjct: 745 EAQGWHFVLGEEKFEKILRWDDGEIILHGRVDRMDENATGERAVLDYKS 793 >UniRef50_A3VPE1 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VPE1_9PROT Length = 1015 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 87/822 (10%), Positives = 184/822 (22%), Gaps = 125/822 (15%) Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 L + RA + E L + P+ + G L + + AL Sbjct: 170 LSALLSMTPEDLAGRAADHWH--EHLRFLSILAEAWPAILSKQGCIELSDRQTRLMTALA 227 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 H + + A A T S + Sbjct: 228 DH-------LSATPDGPPILIAGALGATEATAHLMESVAKSPRGAVILPGAMPMAADQST 280 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE--NRA 349 +P + L + +D L L Sbjct: 281 LLPPSHP--------QAAFQRWLRRVGGGASVDLSPWDERMTDRKQATRAFLSLALTPAE 332 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 G F+ + LD + ++F +P E + + L +LE + + Sbjct: 333 ETGDWHRRFADFRDAYSLDEALAPLSFATAGTPNEEADFVALLLREVLETEGKTA----L 388 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 ++ D D + S + Sbjct: 389 LVTPDRDLARRVCAK-----LRQWDIRLDDSGGTPLYGAYRGTYIRQWAHWLGAPDDPVA 443 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 + AL+ + +T L + V+ L W+ Sbjct: 444 LAALVAHGLFL--RGLTRSDKERLARRVDRR---------------LRGMRPRDWQDTQR 486 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 R+ LL L+ R E L Sbjct: 487 RLAGEGPSPLET------------------------ELLQDLDAALRAFQAATTQHERLR 522 Query: 590 VCRDMLNAFF-LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 ++ + F D + + A ++ + + P + L Sbjct: 523 ALIEIADRFARSADGDQLLWQDQDGEALAAQLSAMMQTAFLPDCPPAAFASLFEALLGSA 582 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 I + + L+ R V L G+ +G +P+ F + + G + Sbjct: 583 VIRTYGTHPRLTVLGLVEARLQSADRVILAGLTEGTWPKLTTADPFLPHNVRLALGLPTH 642 Query: 709 RDDDRYLFLEALISA-QQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 + L+ + A +++ + +S + PS + L + I + + Sbjct: 643 DAEVGRSALDFVDHALGEEVILIRSEKSDRG--PALPSRWLTRLYNLIEAAKQTEATDIT 700 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT 827 H + A +P Sbjct: 701 GRLRGWVGALRHP------------------------------ASVDPALPPMPRPAAAL 730 Query: 828 LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNA 887 LP + + + + P + + L++ ++ P R + + Sbjct: 731 LPARLSVSDIGQLIRDPYSVYARRLLRLFPLDPLAQEPAE-------RERGTLFHAVYER 783 Query: 888 LVE---QDDAERLFRRFRAAG----------DLPYGAFGEIFWETQCQEMQQLADRVIAC 934 L + + +F A Y G+ + Q Sbjct: 784 LAKVAPDRVTQEVFAHALAETIDDCLYPSECHDLYAMMGQRAGKAFSVISQTQRRDGATA 843 Query: 935 RQPGQSMEIDLACNG--VQITGWLPQVQPDGLLRWRPSLLSV 974 E+ + G + + G ++ + Sbjct: 844 TFAEIEGELTVMAGGRSIDLYGRADRIDLYPDGTYTIIDYKG 885 >UniRef50_B8ESP3 Double-strand break repair protein AddB n=1 Tax=Methylocella silvestris BL2 RepID=B8ESP3_METSB Length = 1043 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 97/692 (14%), Positives = 171/692 (24%), Gaps = 101/692 (14%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR 308 G A+LL LP + D G P ++ Sbjct: 248 GSTGSNRATARLLDAIASAPRGAIVLPGLDLKLDEAAFALVARAADEGEP---AFTHPQA 304 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD----ILELENRAVAGVNIEEFSRSDNK 364 LL L S++ +V P L Q I E A A + ++ + Sbjct: 305 ALCRLLRTLNMSRD-----EVRPLGALTKAQDARERFISEALRPAEATDAWIAYRQAIDP 359 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 L+ + +T + E L + LE ++ D + + Sbjct: 360 ALLEEALAGVTLIEAADEREEALALAIAMRHALERPDGTA----ALVTPDRE-----LAR 410 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 + + S S + + + V AL+ L R Sbjct: 411 RVAAELLRWGVRVEDSAGEPLGSGEAGLLARLVAACAADDMSAATVAALMAHGAL--RLG 468 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 + E + LR + +R A+E A + Sbjct: 469 FSREEIARLRPLLEIGVLRAAAGGKLRDP--------------------ARAIELAAAQA 508 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRR---GLAQERPLEEWLPVCRDMLNAFFLP 601 + + L LM+L R ER L W+ R L A Sbjct: 509 DGPHAHPAQKRIFPRESDALRDFLMRLEAALRPMLEAGGERDLAFWVEAHRTALAAIRAG 568 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PVN 660 + E E + E L A + A + R+ + Sbjct: 569 EPEEEDSGEDGEALAALFEELALSATSEMRFDAEAYQFFFAAVAGEARLGAAGRTHPRLK 628 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD---RSRRDDDRYLFL 717 I L+ R + V+ L G+++ V+P Q F + G + + F+ Sbjct: 629 ILGLLEARLMDVDVMLLGGLDESVWPPQARADAFLNRPMRAALGLSPPERKLGQTAHDFV 688 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 +A+ K+ +S + + S +Q L G + Sbjct: 689 QAMGR--DKVVLSRAAKRG--GAPTVASRFIQRLAALGGPAWA----------------- 727 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETL 837 + AR A+ +P P + + + Sbjct: 728 -------------ACAARGKTYLDLARLIDRPAAAPAPLRRPEPKPPVALRPNRLSVTKI 774 Query: 838 QRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL 897 + P + + L++ P + A Sbjct: 775 ETLRRDPYAVYAETILKLLPLDSIGRTP-------GPAETGSAIHAAIEAFTASFGP--- 824 Query: 898 FRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 G LP GA + LAD Sbjct: 825 -------GPLPAGARDTLRALLLKALEDNLAD 849 >UniRef50_C4GBK5 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GBK5_9FIRM Length = 640 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 78/514 (15%), Positives = 144/514 (28%), Gaps = 92/514 (17%) Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL 317 + + + DR FR + + L WG L Sbjct: 195 EARILLEENPAIRDRWSHRFRMILVDEAQDMDALQFSLVQILAEGWG-------NLFLVG 247 Query: 318 ESSQELDAFVDVTPDNLLHNIQ----SDILELENRAVAGVNI----------EEFSRSDN 363 + Q + F P LL + IL L+ + +I + + + Sbjct: 248 DDDQSIYGFRGARPGLLLDIRSTYPNAVILHLQTNYRSTRSIVKAAKRLIGHNKMRYAKS 307 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 RP I +P+ E E ++ +L + + V+ + I Sbjct: 308 IRPDRKEMGRIVVRRLRNPREEAE----QIGGLLRKRRG----ETAVLFRTRAQSTELI- 358 Query: 424 AVFGSAPADRYLPYAISDR-RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 +P+ + + R H + + IS SL ED+L +L+ P Sbjct: 359 ----RVLRQEGIPFYMRRKERKVAGHWLTQDIISYCSLALGHRRREDLLRILNRPCRQLP 414 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL---GYAMES 539 EE + G + A + + LL GY Sbjct: 415 RSCIEEETFEWGELGRRLKEHPGQAKQFLELERDMAFLASSSPYAALTYLLGKVGYRAFL 474 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 + +DE L+G L L + R E + + Sbjct: 475 EESYRGKRSEWDEIEM----LLGILMGLARGIRG--------RGKEALKSYIKILEEERL 522 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 LP+A + + L Q V Sbjct: 523 LPEAGGADQYDQRRRGMGE-----------------------NEILAQSNNRAPP----V 555 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 + T + + F V ++ +N+G+ P A R +++R +F A Sbjct: 556 GLFTFHGSKGLEFDQVHIMDVNEGITPSSRARG-------------REALEEERRMFYVA 602 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 L A++++Y+ N + PS + E+ + Sbjct: 603 LTRAKREVYLYSCL--EMGNQKLAPSRFLAEIQE 634 >UniRef50_B9ZQQ0 UvrD/REP helicase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZQQ0_9GAMM Length = 704 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 54/506 (10%), Positives = 133/506 (26%), Gaps = 64/506 (12%) Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG 307 W + + + + + + S N + D + W Sbjct: 226 WAAKLEERFTHIAVDEAQDTNRIQYAMLRLFSSHNNVIMVGDDDQCIYE------WRGAA 279 Query: 308 RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 + D + + + + + + + + E + Sbjct: 280 PSNLRTFRDETEAAIVRLERNYRSTPSIVSAAARHIACNQTRIEKSPYAEGRADGDPPDG 339 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + + + + D ++P+ I ++ I V Sbjct: 340 QQHPDGVAM---------ANAIAQDIREAI--DSGISPKRIAILYRVNK-----IARVLE 383 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A R +PY I+ P + + + L + S + + E Sbjct: 384 PALIARGIPYHIAQGIDVFQTPEAQLLMGAVRLVQNPQDSMA-----ATKLAQLVKGLGE 438 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L + + + + R+ + L++M+ G A Sbjct: 439 RSLNDMIGYS----VIHDLPILECRQHVKLSKPAFAAAERLSQMIDGLAQWPPLYL-AEW 493 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 E G L + + + + E +++ Sbjct: 494 ALDPEMGG-----------FQDTLKELSKTADKPKTMYERR--LTTIMS----------- 529 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 IE+ Q + S + + + L + V + T+ + Sbjct: 530 ----IEEAIQGRFGTSDQGKADAEYSRSEQWEIVQE-LALAAPDEEAEQDAVTVATVFRV 584 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + + V + GM+DG+ P + + + + +++R L A A+++L Sbjct: 585 KGLEYHTVHIAGMSDGLMPMRRSSDKPPMFDEDEDEAA-QNVEEERRLSYVAATRARERL 643 Query: 728 YISYIGRS--IQDNSERFPSVLVQEL 751 + + R D PS E+ Sbjct: 644 VVHHADRIHWGYDEDFFTPSGFADEM 669 >UniRef50_Q03D71 ATP-dependent helicase/nuclease subunit A n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=ADDA_PEDPA Length = 1235 Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats. Identities = 46/391 (11%), Positives = 111/391 (28%), Gaps = 84/391 (21%) Query: 385 EVEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 +++++ R+ + + L DI ++ + S ++ V Sbjct: 543 QLQMIAQRIQKLFADHTQIYDKKEQKMRDLEYSDIALL---HSTGSNNLEIV--DTFKKY 597 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P +++ + + ++LL + D+ + + A+L P++ + E L +L Sbjct: 598 GIPIQVNNAQDYFQTTEVSIMMALLKIIDNPYQDIPLAAVLRSPMV----GLKENELAFL 653 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R + H + L + + D + Sbjct: 654 R---------------------IGKKNGHYFEALL--------------YFLNEAKLDSN 678 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETEAAMTL 611 + +L + L QL+ + LA++ L + L D + + Sbjct: 679 NEFQMQLKTKITHFLEQLDHF-SKLARQSTLVDLLWAIYDETGYLDYVGGMPDGPQRQNN 737 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERISQRFLAGPVNICTLMPMRSI 670 + + + +++ + D V + T+ + + Sbjct: 738 L-HALYDRAKGYEESSFKGLFQFVRFVEKMRDKNKDLAENPVVTDVKAVKLMTIHGSKGL 796 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK-----------------------RGDRS 707 F +V L+ G + + L + Sbjct: 797 EFPIVFLIDAEHG-FNTMDEKGRYVLDRDAGMGITLKDFIHRLEIDTVQKNWIISIKKQK 855 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 + + AL A+QKL I+ S D Sbjct: 856 ALAEKLRVLYVALTRAEQKLIITGAVNSADD 886 >UniRef50_C0EV13 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EV13_9FIRM Length = 1221 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 84/743 (11%), Positives = 186/743 (25%), Gaps = 162/743 (21%) Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSIT-FHVCH-SPQREVEVLHDRLLAMLEED 400 E AG + L + S+ E ++ R+ ++ + Sbjct: 494 YNEETALRAGEGGPMLEDKETSELLFFVKDSVQTLEEAPEDVLTETALITKRIQELI--E 551 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 DI++++ + +P + ++ + ++ LS+ Sbjct: 552 EGYHYGDIVILLRSGAGRMEPM----AEFLEKNGIPVSCENKTGYFHTREITIILNYLSV 607 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 D+ + + +++ L++ TEE L LR V E P Sbjct: 608 VDNVYQDIPMASVM----LSSIGGFTEEELTKLRILVRE-----------------PMRE 646 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 Q+T ++ G EL + L +R + Sbjct: 647 QYTLY--------------------DLMCLYLQEGAEEELRAKIQHFYKDLQYFREQ-KK 685 Query: 581 ERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 E+PL L R + + + + + + Sbjct: 686 EQPLGVLLWDIYQRTGFYYDVQLMPDGAKRKENLLMLLKK-AEDYEKTVFKGLFYFNRYM 744 Query: 639 DELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN------DGVYPRQLA 690 ++L + E S V I T+ + + F VV + G++ D P Sbjct: 745 EQLKSYEIELGEAGSGTENENVVKIMTIHKSKGLEFPVVFVSGLSKKFNRMDLTKPMLCH 804 Query: 691 PL--------GFDLMSQKPKRGDR--------SRRDDDRYLFLEALISAQQKLYISYI-- 732 P L P R +++ + A+ A++KL ++ I Sbjct: 805 PELGIGMECVNITLRFHHPSLMKRAIQEKVWKDTLEEEMRILYVAMTRAKRKLILTGIIK 864 Query: 733 GRSIQDN--------SERFPSVLVQELIDYIGQSHYLPGDEALNCDE------------- 771 + ++ R S + L+ + E E Sbjct: 865 AQDLEAGLRLQINTQKWRATSA-MDWLLPILADQFRSTQSEKSEEREGFLKNQETQKQAH 923 Query: 772 ----SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT 827 + + +KA L +PF + + E SY + S Q + Sbjct: 924 SEGVTASWLKARLVNWEEILPFFEKERKQKEEFSY--QIFMDTVVIPADVSMVEQSFSYE 981 Query: 828 LP--------ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF--------- 870 P + L+ + +P+ F Sbjct: 982 YPNRDATKWKRKYSVSELKTLSQT----------TLPEEESSIMLPEQNNFEEEVKMPEF 1031 Query: 871 ------ILEGLSRYQINQQLLNALVEQDD---------AERLFRRFRAAGDLPYGAFGEI 915 + +R I +++ L + L + + + Sbjct: 1032 LKEEKSEIAATARGTIIHKIMELLPFGQIQTKKQLFEWIDALKGTYPESEKISAKWLYRA 1091 Query: 916 FWETQCQEMQQLADRVIACRQPGQSMEIDLAC------------NGVQITGWLPQVQPDG 963 E+ + ++ + + + + V + G + Sbjct: 1092 IEAFLFSEIGEKLSQMDRQGNLRKELPFTVGLPVSLMNADTQAEDTVVVQGIIDICGEAE 1151 Query: 964 LLRWRPSLLSVAQGMQLWLEHLV 986 W + + L+ Sbjct: 1152 ESLWLI-DYKTDRIKEGEESLLL 1173 >UniRef50_A2ST33 UvrD/REP helicase n=1 Tax=Methanocorpusculum labreanum Z RepID=A2ST33_METLZ Length = 1057 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 91/771 (11%), Positives = 185/771 (23%), Gaps = 133/771 (17%) Query: 250 DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD 309 D A+ ++ + G ++ VG+ + + G D Sbjct: 350 DAVQKTLNARYRYILVDEVQDNDPVLTDIIRILCGDPKENNRLFIVGDAKQSIYLFRGAD 409 Query: 310 Y--IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 + ++ ++ + + + + + I E + Sbjct: 410 VSGFNAFQTVFANDPVELDTSFRTVPEIIRLVNHVFS--SVFADPKEIWEAGYGELTPHR 467 Query: 368 DPLDSSITFHV-------CHSPQREVEVLHDRLLAMLEEDP-----------TLTPRDII 409 S+T S +RE L + + DI Sbjct: 468 AGHSGSVTLIRLPTGETKAESMRREARTLASWIFDTVSRKKLSVYDKDGTCRPARFGDIA 527 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 V++ + A +PY + + F +LL Sbjct: 528 VLI----EARTHMDK-LRHALESYGVPYTEEKGYSFYQKQEVFDFTNLLKAIVYPEEDIP 582 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 + +L P F I++ L +G + Sbjct: 583 LYGVLKSPY----FGISDAELCR-----AAAGSGRPLIWRLRN----------------- 616 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 YA + + + L W + E + Sbjct: 617 -----YATANPDS--------------------KIGKAVGDLARWHAEIGTEPFVPFLSR 651 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE- 648 + + A T ++ AI + L +++E Sbjct: 652 LIAESGIAAVYGGLPFGREATANLEKLVAI---ARSRSMNRPFSVYEYLGILDTCMEEEF 708 Query: 649 ----RISQRFLAGPVNICTLMPMRSIPFKVV--CLLGMNDGV--------------YPRQ 688 + V I T+ + + + ++ C G DG+ P + Sbjct: 709 DEREGMVPSEEDDRVKILTVHASKGLEYPILALCFAGTGDGLKVSAPVFDAELGVGIPVR 768 Query: 689 LAPLGFDL---MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 LA G L + + + LF A+ A+ L IS G + E Sbjct: 769 LAGEGEGLSFVIECLKPEMKAKLLAERKRLFYVAMTRARDHLVIS--GTDGKKGPETN-- 824 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 + I YLP E + P P + + E Sbjct: 825 SFLSMYDAGISGCPYLPELITDCVAEPGDLCRIR--------PKVPDGWTDTPLPTKEEE 876 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPETVPLETL-QRFWAHPVRAFFQMRLQVNFRTEDSEI 864 A+Q+ A P + L + F P A + R + + Sbjct: 877 ----AAQSLTAAVRNRTPSAAEEAAMLRGTALHEVFEGKPADAAVK-RYGLPPAAAEEFA 931 Query: 865 PDTEPFILEGLSR---YQINQQLLNALVEQDDAERLFRRF-------RAAGDLPYGAFGE 914 F+ L + I +Q + E + R D G + Sbjct: 932 AKYAAFLASPLMQNAAKSICEQEVAFSFEGTPLNGVIDRLVQYEDGSWMIIDYKTGRPSK 991 Query: 915 IFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLL 965 + E ++ + + L+ ++ + + + GL+ Sbjct: 992 MELERYESQLAVYFLWAKRLFGKDPEVCLYLSDKNEVVSFTMDEERAMGLV 1042 >UniRef50_Q0FE32 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FE32_9RHOB Length = 985 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 86/698 (12%), Positives = 187/698 (26%), Gaps = 107/698 (15%) Query: 322 ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHS 381 + D N+ + ++ ++ L R N K L+ + + Sbjct: 269 DFDDVDPWHKANIRNIDRNKLISLALRPAPITNQWLEYGPLLKPYLNKATQDLELIEADT 328 Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD 441 + E + RL E+ V+ I + V + A + S Sbjct: 329 IKEEALAIATRLRFATEQGQA------AVL---ISPSRNLTRRV-NANLARWNIEADDSA 378 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 Q S+ + +S D LALL P+ + R + + Sbjct: 379 GTPLQLSTTGIFLRSIAQCFGNSTLSYDFLALLKHPLTHSGKG------RNIHNLMTMEI 432 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA-QGEWQSVLPYDESSGLIAEL 560 + + P +L G+A + + W L A+ Sbjct: 433 EVGQFNGAKILRGGPPFIDFD--------ILSGWATKDPHKTIWVKWLTRIFQPLRDAKE 484 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 + L+ W L + + + + I+ Sbjct: 485 ME--------LSEWLNLLKKTA------ETLSSSPENDIDAKVWEKDSGKAALKTLDQIL 530 Query: 621 AEGLGAQYGDAVPLSLLRD-ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 + + + + + L+Q L E S L ++I + R +V L G Sbjct: 531 HQSVSSGIMSNIEFNAFLRSILSQELRSETQSANPL---ISIWGTLEARVQSKDLVILGG 587 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL------FLEALISAQQKLYISYIG 733 +N+ +P + + + + S +R + F +A+ + + +S Sbjct: 588 LNEDTWPSKPNHDMWLNRDMRKQL---SLLLPERRIGLSAHDFQQAVSA--HNVVLSRSL 642 Query: 734 RSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 R + ++ PS + + + + + D Sbjct: 643 R--EGDTPSTPSRWLIRITNLMQGLKNEGPN-----------------------ALDEMR 677 Query: 794 YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP--ETVPLETLQRFWAHPVRAFFQM 851 + +YAR P+P E + + ++ P + + + Sbjct: 678 NNGNQWLTYARSLDRVDETKKIPFETRPSPIPPENARLEKLSVTQIKDLVRDPYKIYASV 737 Query: 852 RLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR---------FR 902 L++ + D + R +L + Q E Sbjct: 738 ILKLKKLDPLGKQAD-------AIERGNTIHTILEEFIRQTQNELPENASNLFMKITNEV 790 Query: 903 AAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP------GQSMEIDLACNGVQITGWL 956 D+P+ A ++ + I R + EID ++T Sbjct: 791 LKKDVPWPAAQRLWLARMQAISSSFIEEEIKRRAVGINIALERYGEIDFQDLKFKLTAKA 850 Query: 957 PQVQP--DGLLRWRPSLLSVAQG--MQLWLEHLVYCAS 990 ++ +GL + +Q + + L A Sbjct: 851 DRIDQGKNGLRLYDYKASKPPSLGDIQYFDKQLQLEAM 888 >UniRef50_Q28JY0 Putative uncharacterized protein n=1 Tax=Jannaschia sp. CCS1 RepID=Q28JY0_JANSC Length = 986 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 95/737 (12%), Positives = 207/737 (28%), Gaps = 132/737 (17%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 A V + + + + +T SPQ E + R+ + + + Sbjct: 297 LRPAPVTNQWRTEGPKLTDVSGAMAGVTLLEAPSPQMEATAIALRMRKGVADGQRV---- 352 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 ++ D + V R LP S + + + + Sbjct: 353 -ALVTPD----RRLARKVTAQLDRWRILP-DDSAGQVLAQTAPGRFLRQVAEMLCGPVTA 406 Query: 468 EDVLALLDVPVLAARFDIT-------EEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 E ++ALL P+ + D + L+ LR+ + +D R+ ++ T Sbjct: 407 EAMVALLKNPLCNSGPDRGNHLRRTVDLELQLLRKGLTFPTRAALMDWAAARKDDVDTTA 466 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 TW A + + LP E L LA+ + Q L + Sbjct: 467 WVTW----------LADHLLEPVETAALPLAERVALHKSRADALAAGVDQ--TTTHELYK 514 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 + P E+ + R++ + D + + A+ + Sbjct: 515 QEPGEKAETLLREL---QAVADTGGAMSARDYADFFTALAHD------------------ 553 Query: 641 LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 + R + R A V I R V L G+N+G +P+ + + + Sbjct: 554 -----REVRFALRPHAD-VLIWGTQEARVQGADVTILAGLNEGTWPQAASADPWLNRPLR 607 Query: 701 PKRGDR---SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 G R + F + + A ++++S R + + P+ + L++ +G Sbjct: 608 ADAGLRLPDRVIGLSAHDFQQGI--AGGEVWLSRAKRDDETD--TVPARWLNRLVNLLGG 663 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH 817 + + E + A ++ A Sbjct: 664 ASDASS-----------------------QALTDMQARGAEWLTLADTLSTPDARETPAP 700 Query: 818 SEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR 877 P T + + ++R P + L + PD R Sbjct: 701 RPAPAPQNITRLTALSVTDIERLIRDPYAIYAARMLNLRALDPLRASPD-------ARLR 753 Query: 878 YQINQQLLNALVEQDDAERLFRRFR---------AAGDLPYGAFGEIFWETQCQEMQQLA 928 + +++ + + + A D P+ A ++ + Sbjct: 754 GTVFHRIMEQFITATPTDLPEDAGQVFMGLAGDILAQDAPWPAARHLWRHRLQTILPWYL 813 Query: 929 DRVIACRQPGQS------MEIDLACNGVQITGWLPQVQPDGLLR-----WRPSLLSVAQG 977 + + R + + + G+ ++G ++ R ++ L + Sbjct: 814 AQEASFRALAEPWVLEERKDWHVPGLGMTLSGIADRIDSLPDGRVAIYDYKTGNLPTDRM 873 Query: 978 MQLWLEHLVYCAS----GGNGESRLFLRKDGEWRFPPLAAEQALHY-----------LSQ 1022 + + L+ A G + L + + +A + L + Sbjct: 874 EIAYNKQLLLLALMGRGGAFADRPLDVARLAYVGLGTKPEIRAQDFDDGLLDETFKGLRE 933 Query: 1023 LIEGYREGMSAPLLVLP 1039 LI Y PL+ P Sbjct: 934 LITHY----RQPLVGFP 946 >UniRef50_UPI000050F874 UvrD/REP helicase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F874 Length = 1086 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 87/879 (9%), Positives = 201/879 (22%), Gaps = 153/879 (17%) Query: 198 ESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYL 257 + T P +P+ V G+ P L+ L + LF +P + + Sbjct: 246 RAWTFAPDVVPTVVLADGVQDFPAASWGLLEQLRERGSALALFGSP------ETVTGRFH 299 Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL 317 + R + ++R + D G + WG L + Sbjct: 300 GADASIIDRSASDERFTTVVLPEVKNTADELVAVGDDFGRRITTRWG---------LQHM 350 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFH 377 + + V+ P+ + H Sbjct: 351 PRPDGAARTGESAD-----------------GIEPVDAGPQQGEGEPEPVASSPDKVETH 393 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 V L R+ + + D+ V+ + + + S A + Sbjct: 394 VFEGAASSYRYLARRVTNFV--EDGHAWSDVAVLCRNTSTARVVANELSASGVATANI-- 449 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 + P + LL+ E + A + + +R ++ V Sbjct: 450 ----MQPLSIDPATAPLLELLARTPDFDDDESIAAQALSLAGSIYVRLDPVQIRRFKRVV 505 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 + A ++ L + + + + E + Sbjct: 506 RKQ--------------FPAAKSSNSLAQALRSDIDDSSPPGLATISRMLHAAAEVGSVD 551 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 L + + E+ Sbjct: 552 PH---------EALWGIWEAAGIADKWQ-------------TEVLKDPESVANAHLDSVL 589 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQR--LDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 + +A++ +Q V + T + + +V Sbjct: 590 RLFTLAEKISDRGGFTARSFAGIVAEQDIAQDSLAAQAGTDDLVQVGTPSSLAHLRVPLV 649 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQ----------------KPKRGDRSRRDDDRYLFLEA 719 + +N+GV+P G + R+ ++ LF A Sbjct: 650 IIAEVNEGVWPNPKIRGGILGLDDLSAVLLTGETVTSDPGYHSHAKRTNLREEGELFYTA 709 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 L A++ + ++ ++E PS L + A+ ++ + Sbjct: 710 LTRAEEHVIVT-----AISDAESNPSPFFDVLAAGTAKGTQDADGYAITHEDELLPLSLA 764 Query: 780 LTCLHTRMPFDPQNYQPGERQSYAR--EWLPAASQAGKAHSEFVQPLPFTLPETV----- 832 H R + + EW + S P + E + Sbjct: 765 EMAAHARARLLRAAADSEQETAAEDVEEWAQLMAALSATSSTVDPPERWRETEDITSAQP 824 Query: 833 ----------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 ++ F +R F + + I Sbjct: 825 LYGAEDLVKVSPSQVESFTDCSLRWFLTRNGGDRPGSLAQSL-------------GTIIH 871 Query: 883 QLLNALVEQDDAE--RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQS 940 + + D + + +L + + Sbjct: 872 AAAENYPQGPASAIREFVDEEFKTLDFDAEWERDREHVLAMKMADRLGEYIKDSPGEPIG 931 Query: 941 ME-------IDLACNGVQITGWLPQVQPD----GLLRWRPSLLSV-AQGMQLWLEHLVYC 988 +E +D ++TG L +++ ++ ++ + Q M + VY Sbjct: 932 VEAQVYATGVDENGQEWKVTGRLDRIERTPEGIRIVDFKTGKNTPTGQEMPRHAQLGVYQ 991 Query: 989 ASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGY 1027 + + D A Y ++L+ Sbjct: 992 --EAINSGSITIGDDQVV--------DAKAYGAELVFLR 1020 >UniRef50_Q2YB42 DNA helicase/exodeoxyribonuclease V, subunit B n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YB42_NITMU Length = 930 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 79/677 (11%), Positives = 181/677 (26%), Gaps = 104/677 (15%) Query: 332 DNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD-SSITFHVCHSPQREVEVLH 390 D++ + + +LE + + ++ + ++ C E+ Sbjct: 194 DSVTPQWAALLAKLEEAGCEVDEMTRTDPAAHRFEVPYSPNRTVHRVECDVSNDEIYQAA 253 Query: 391 DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD----------RYLPYAIS 440 A +E+D T + ++V + Y + +F S R++P+ IS Sbjct: 254 VWARARIEKDSTAR---VGIVVPPLSEYRSSLVRIFSSVMDPDVRQALPGVPRHMPFNIS 310 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 A S+P++ +L L E LL P LA E Sbjct: 311 LGVALSSYPLVHTAFLVLELIQGEIEFERASLLLRSPFLA-----GAET----------- 354 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 + L+ + L R+L+ E+ L+ +L Sbjct: 355 ------EMLPRARLDAKLRKRAEPVITLERLLVLVKRENNANC-----------PLLVKL 397 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 + +++ + + L + ++ ++ +++ + Sbjct: 398 LWDCEKFCKKMS---TDVQRPSTLARAISDILQLVGFPGERAPDSS-EYQTLKKWQDVLA 453 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 L + L P+ I + + F + ++G+ Sbjct: 454 GLALLDNVTIGMSYRQAISHLRGVAADTLFQPETPDVPIQILGVFEAGGMMFDHLWVMGL 513 Query: 681 NDGVYPRQLAPLGFDLM----SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 +D +P Q P F + +++ G + + F E ++A +++ +S+ S Sbjct: 514 SDEAWPLQPRPNPFLPIELQRAERLPLGSPAATLELASRFTEGWLAASKEVILSHARHSG 573 Query: 737 -QDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ 795 D E PS L+ + + L D + D Sbjct: 574 SSDTRELAPSPLIAHIATSDIRLFGLLPDYVKHRD------------------------- 608 Query: 796 PGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRL-- 853 + + V + ++ A P RA RL Sbjct: 609 ------LIHQGRRLERIKDEPAPGIVSGKGGEGRARGGVAVIKDQAACPFRALALHRLHA 662 Query: 854 -QVNFRTEDSEIPDTEPFILEGLSR-----------YQINQQLLNALVEQDDAERLFRRF 901 + + + + E L++ + + L L+ E + R Sbjct: 663 EGLKTPHPGLDAGERGTLVHEMLAQVWERIKNKSALDALAEDELRTLLTSAAGEVIARMS 722 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ---PGQSMEIDLACNGVQITGWLPQ 958 + + ++ + + G+ + L + Sbjct: 723 ARHSHTLSERLARVEQRRLVRLAREWLEEERKRGDFTVVSTEARKSIEIGGLALDTRLDR 782 Query: 959 VQPDGLLRWRPSLLSVA 975 V R Sbjct: 783 VDELADGRRIVIDYKTR 799 >UniRef50_A6CVP4 UvrD/REP helicase n=1 Tax=Vibrio shilonii AK1 RepID=A6CVP4_9VIBR Length = 690 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 54/469 (11%), Positives = 132/469 (28%), Gaps = 90/469 (19%) Query: 326 FVDVTPDNLLHNIQSD---ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSP 382 F +L IL+L N+ + ++R P +T Sbjct: 292 FSPPAKVIMLTTNYRSHQGILDLSNQLLNEGQEGYKVELHSERKQGPKPQLVTV---EDD 348 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 ++ E + + +L + + + V+ + R +PY Sbjct: 349 AKQAEYIVESILR--AREEGIELKRQAVLFRS-----SYHSDRLELELTRRDIPYVKHGG 401 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 ++ +S+L D+ + +L I + + + + Sbjct: 402 LKFLEAAHVKDLLSILRWADNPKHTISAFRVLK-----LLAGIGPKTANNIIEHLKAHQY 456 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 ++ D A + +S+L + ++ AE + Sbjct: 457 QFSALSDCKVPFS--------------------ARAEFKTLVESLLTINSNAVPWAEQLS 496 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 LA+L L + F+ +EQ Sbjct: 497 LLATLYSPLLEL-------------------NYDDHFV-------RWGDVEQLVMISGQY 530 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 ++ + L Q + + + + T+ + ++ V +L + D Sbjct: 531 STRERFLTELTLDP-----PQSTGDLASNPKIDDDFLILSTVHSAKGQEWQNVYVLNVAD 585 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI-----SYIGRSIQ 737 G +P + GD+ +++R L A+ A+Q+L++ ++ Sbjct: 586 GNFPN------------EYAVGDKRALEEERRLLYVAMTRAKQELHLMQPMKYWVPEQQS 633 Query: 738 DNSERF---PSVLVQE-LIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 + S + + L +++ + HY + A+ + Sbjct: 634 WGDKHVYGGKSRFMTDSLCEHLNRVHYPKIAPDAQDKKIAAKAITDIRK 682 >UniRef50_UPI0001C36633 recombination helicase AddA n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36633 Length = 1244 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 83/697 (11%), Positives = 186/697 (26%), Gaps = 146/697 (20%) Query: 381 SPQREVEVLHDRLLAMLEEDPTLT-------------PRDIIVMVADIDSYSPFIQAVFG 427 S + E ++ R+ ++ + L D+++++ + ++ F Sbjct: 562 SREMEARLIVSRMKELVNPETGLKIWDKKEKRYRTACYGDMVILLRSLSGFA----EDFV 617 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + + +P R + +E + LS+ D+ + A+L P++ ++ Sbjct: 618 NILMNEGIPAYAERRTGYFTAIEVETVLCFLSVIDNPMQDIPLAAVLKSPMV----GASD 673 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 E L L A + T + G R + G W Sbjct: 674 EDLARLM-----------------------AVFKRTAKKGQDRGIYG--------AWLYY 702 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAET 605 L EL LA +L +R +A + E L V + + Sbjct: 703 LENCPEEEREEELYRKLALFFDELAEYR-RMAGYLSIHELLYVIYENTGYYDYVAAMPAG 761 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ-ERISQRFLAGPVNICTL 664 +A + + Y ++L + + V I ++ Sbjct: 762 DARQANL-DMLVEKASAYEKTSYSGLFHFIRYIEKLKKYDTDFGEAALAGDGNTVRILSI 820 Query: 665 MPMRSIPFKVVCLLGM----NDGVY-------PRQLAPLGFDLMSQK-----------PK 702 + + F ++ L GM N P + + + + Sbjct: 821 HKSKGLEFPIIFLAGMGKKFNKQDLYGKILIDPDLGIATDYLDLDLRVKTSTLKKNVLRR 880 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGR----------SIQDNSERFP----S--- 745 R + ++ + A+ A++KL ++ R I+ + + P S Sbjct: 881 RLELEALGEELRVLYVAMTRAKEKLIMTGTDRYLDKKLERFSDIKRTAGQIPFTILSTAD 940 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESE-----ARVKAHLTCLHTRMPFDPQNYQPGERQ 800 + L+ + + E+ A L + + + + Sbjct: 941 SFLDWLLMSLSGKLSESALLSEAGVETGLMTVREYSVADLVGVEIEHQAEKKLSKEELLN 1000 Query: 801 SYAREWLPAASQAGKAHSEF---VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNF 857 A AG + + L + + L++ + Sbjct: 1001 FDCSRIYDEAYAAGISAAFSYHYPHTADIGLHTKLSVSELKKQGQ------------MVD 1048 Query: 858 RTEDSEIPDTEPFIL---------EGLSRYQINQQLLN-----ALVEQDDAERLFRRFRA 903 E + +P F++ G R + L A+ D E F Sbjct: 1049 EEESTFLPTIPAFLMEENGKKEQGGGAFRGTAYHRALELLEFPAMKTLADVETALETFHR 1108 Query: 904 AGDLPYGAFGEIF-------------WETQCQEMQQLA--DRVIACRQPGQSMEIDLACN 948 + + + + + L ++ P + ME+ + Sbjct: 1109 EKYMDEESLALLDAGIIWNFLSSPLGRRMSAAQSKGLLYKEQQFVIGIPAREMEVCDSGE 1168 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL 985 V I G + +G ++ L Sbjct: 1169 LVLIQGIIDAYMEEGDGLVLI-DYKTDHVVKGHESLL 1204 >UniRef50_A7IKI5 Double-strand break repair protein AddB n=2 Tax=Xanthobacteraceae RepID=A7IKI5_XANP2 Length = 1015 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 101/775 (13%), Positives = 190/775 (24%), Gaps = 117/775 (15%) Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 A S L + I+ P+ E + L LE + Sbjct: 317 AETSDLWASVSDRLPPAALGTAMAGISVVEADDPRAEALAIALLLRDSLEREGETA---- 372 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 ++ D D + + A + S P L+ Sbjct: 373 ALVTPDRD-----LARRVAAEMARFGVALDDSAGTPLADSPAGRLAGLLVMAAAEDLAPV 427 Query: 469 DVLALLDVPVLAARFDITE----EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + ALL P+ A+F + + + L + + H Sbjct: 428 PLFALLTHPL--AQFGLAPEAKADAVAALELVALRGPRPRAGIGGLMDAIAAFDRDDHRG 485 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL-VGHLASLLMQLNIWRRGLAQERP 583 RM G + + L A+ L++L+ G A Sbjct: 486 ADPRRRMGEGALNRARDLVDRLDRALGPMLTLGAQRGAAPLSALVAAHRAAWVGTAGPLD 545 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 ++ + F D A G A+ LS D Sbjct: 546 IDAEDAAEAALARTFETLDGA---------------------AGDGPALDLSAYADAAGA 584 Query: 644 RLDQERISQR-FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 + R + I + R I + L + +G +PR + +P Sbjct: 585 LFADAMVRPRAEPHARIRILGPLEARLIHVDRMVLGALIEGSWPRIAETDPWLS---RPM 641 Query: 703 RGDRSRRDDDRYL------FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 RGD +R + F++ +A ++ +++ + ++ PS VQ L G Sbjct: 642 RGDLGLDLPERRIGLSAHDFVQGFGAA--EVVLTFAAK--VGGTQSVPSRFVQRLKTVAG 697 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 ++ + G R A L A +A Sbjct: 698 EAEWTAARTR------------------------------GARWVQAARRLDDAPAVPRA 727 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS 876 P P + + ++ F P + + D L G Sbjct: 728 TRPAPAPPLALRPRRLSVTEVETFLRDPYSIYARHV-------LGLLPLDPLDAALGGAE 780 Query: 877 RYQINQQLLNALVEQDD---AERLFRRFRAAGDLPYGAFG------EIFWETQCQEMQQL 927 R + + + R G + ++W + L Sbjct: 781 RGSALHEAIGRFTQDHPCKLPPDALERLLEEGRRAFAPLKAFPAEHALWWARFERAAGFL 840 Query: 928 ADRVIACRQPGQ--------SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ 979 R S+EI L ++TG +++ Sbjct: 841 VAFERERRGHLDHVVAEASGSLEIPLGGGAFRLTGRADRIEVRRDGLLNILDYKTGTAPS 900 Query: 980 LWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL-SQLIEGYREGMSAPLLVL 1038 + + + L FP + A L +L G G P+ + Sbjct: 901 ------ARQVASLSPQLPLEAAMARRGAFPDVPAVDVADLLYVELKGGAAGGEEKPIRLK 954 Query: 1039 PESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRL 1093 +T ++ ++ Q R+ + G G R+ Sbjct: 955 DSDTMDLAETALAGLESLLMAFENEAQGYRSLAAPQWSGTF-----GTYDHLARV 1004 >UniRef50_A8SJB2 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SJB2_9FIRM Length = 1261 Score = 129 bits (323), Expect = 8e-28, Method: Composition-based stats. Identities = 42/376 (11%), Positives = 110/376 (29%), Gaps = 78/376 (20%) Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 L++ + +DI++++ S + ++ VF + +P ++ I+ Sbjct: 594 LDDYRKVEYKDIVILMRSPSSNTKILEEVF----LEYNIPIYAESTGGYFDTFEVDTIIN 649 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 LL + D+ +++++ P+ ++ T + L +R Sbjct: 650 LLKIIDNPMQDIPLISVMYSPI----YNFTSKELSEIR---------------------- 683 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 + R L Y +L ++ + L ++ + L ++ Sbjct: 684 ----------LVDRELKFY------ELLIKILEDEDIE-IRISLKEKISKFIYDLKLFIE 726 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 +E + + + + + + L Sbjct: 727 K-KSLVSADELIWFLYKYTGYYNYVGL--LDMGEQRKTNLMLLFEKAKNYEKNSYKGLFN 783 Query: 637 LRDELAQRLDQERISQR----FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 + + + + IS+ A V I ++ + + F +V L N + + Sbjct: 784 FVNYIQKISLKSDISEAKLISEDANVVKIMSIHKSKGLEFPIVFLANTN-KKFNFRADDS 842 Query: 693 GFDLMSQ-----------------------KPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 L + K + ++ L A+ A++KL I Sbjct: 843 NLVLHQKLGFGAVVYDMDKKTSFNSIMKKKIEKFKKNEQIAEEMRLLYVAMTRAKEKLII 902 Query: 730 SYIGRSIQDNSERFPS 745 + + ++ E S Sbjct: 903 TGRVKDYENLREEISS 918 >UniRef50_C5CB79 DNA/RNA helicase, superfamily I n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5CB79_MICLC Length = 1145 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 111/856 (12%), Positives = 218/856 (25%), Gaps = 140/856 (16%) Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP----LLASWGKLGRDYI---- 311 L R D F E + P LL+ G+ GRD + Sbjct: 255 LTERHPEDPERDAAAQAFVAEERDRLAVLVVEDLHEATPAVHDLLSVLGR-GRDVLLTAS 313 Query: 312 -------------YLLSDLESSQELDAFVDVTPDN--------------LLHNIQSDILE 344 LL+ + D P + +Q L Sbjct: 314 PDTTVEGFRGARPDLLARYPGVLDPDPVPGAAPPASPDGRVRVLTRGHRMRAEVQDAYLR 373 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 + R R+ + D ++ HV + E +++ +R+L + + + Sbjct: 374 VARRVRQ--RTAGVERTRTETVPADGDGAVRAHVVPTRAHEDQLVLERVLR-VHHEDGVP 430 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY-AISDRRARQSHPVLEAFISLLSLP-- 461 I+V+ + +P + + P + ++LL Sbjct: 431 LDRILVVARSGSRVA-----ALARHLEAEGVPVLRDAAGLVLKEEPAVAPLLTLLDAAGA 485 Query: 462 ---DSRFVSEDVLALLDV-PVLAARFDI-TEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 D E+V +V +L R+ + + +R LRQ + + G + L Sbjct: 486 LAEDPEARVENVFDPDEVVGLLTGRYGMASALHVRRLRQDLLAAERGRGGRRTSDALLAA 545 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 R A+ + L + E V Sbjct: 546 ALLDPSLAGPEHER---HRALRRVHWMLRDGLEAARAPSASPETV------------LWA 590 Query: 577 GLAQERPLEEWLPVCRDMLNAF--FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 + E W + +A + + ++ Sbjct: 591 LWSASGRAERWRSLALRPAEHANDRRESRRADADLDAVVALFKVAERFVDQFPGASPESF 650 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 ++ + + V++ T + V ++G+ +GV+P Sbjct: 651 AVYMES-QDLPVDTLARRAESGDAVHVRTPAAAAGQEWDTVIVVGLQEGVWPNTRLRGQL 709 Query: 695 D----------LMSQKPKRGD-----RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 L + P D R R D+ + A+ A++++ + RS + Sbjct: 710 LGATDLVDLVTLPADAPWPTDHRTRLREVRQDELRMLAAAVSRARRQVVAT-AVRSPDEG 768 Query: 740 SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER 799 PS + D + LP + V + + + G+ Sbjct: 769 ----PSDFL----DLVDPPERLPAEARDAAGVRRLTVVPDPITAPALVGRLRRVLEAGDE 820 Query: 800 QSYAREWLPAASQ-------------AGKAHSEFVQPL--------PFTLPETVPLETLQ 838 A P A+ A + PL P + ++ Sbjct: 821 TDAADGATPRAAAAGLAVLAADGVGVADPRRWWGLLPLSTEAALVDPEREVVALSPSRVE 880 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF 898 +P+ + N S + + E + Sbjct: 881 TALRNPLDWVL-YHVGANAGGTL------------AQSVGTLVHSVAEHHPEGVPEDVRA 927 Query: 899 RRFRAAGD--LPYGAFGEIFWETQCQEMQQL-----ADRVIACRQPGQSMEI--DLACNG 949 R + LP G EI + + R R Q + + DL G Sbjct: 928 ELERRLPELGLPEGWITEIEHDRARGLVDAYIGYWSIARAAGRRPVAQEVRLLADLTWGG 987 Query: 950 --VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWR 1007 V+ITG + +++ D R + L + E + + + R Sbjct: 988 TTVRITGVVDRLEADAQGRPFIADLKTGRSAPTGAE-MARQPQLAAYQVAVRAGGLEPVR 1046 Query: 1008 FPPLAAEQALHYLSQL 1023 P L+ L Sbjct: 1047 DDPATDPALRAALAGL 1062 >UniRef50_A6BJS6 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJS6_9FIRM Length = 717 Score = 129 bits (323), Expect = 9e-28, Method: Composition-based stats. Identities = 74/550 (13%), Positives = 152/550 (27%), Gaps = 130/550 (23%) Query: 275 PLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR--------------DYIYLLSDLESS 320 PL + + + + G LL GK R + L L+ Sbjct: 190 PLLKKEKKKENKMSFSDLLEEGTRLL-KMGKNSRPEWIIVDEVQDSDRSQLEFLEALKGP 248 Query: 321 QELDAFVDVTPD----NLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL------ 370 E F P+ + Q+ L+NR A + N L+ Sbjct: 249 -ETKIFAVGDPNQVIYSFRGTTQNMFFLLKNRFQAKELSLPVNYRSNASILEAANRFLQF 307 Query: 371 ----------DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 I + P +E L D++ + +E RDI V Sbjct: 308 GGKIQGSNECGEKIQIRNHYDPFQEAMYLADKIWTLHQEGK--EYRDIAVFYRLQKQ--- 362 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 + A++ +PY +S +++ + P ++ L VL P Sbjct: 363 --AEILEKMFAEQNIPYEVSVKKSWKDIP----VLNWL---------MYVLRFATHP--- 404 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 + ++ Q + + R+G + ++ + M+L Y + Sbjct: 405 -------DDIQAGMQVLMDK--RFGDKCTKKKAEDIIKNHKTEKSDIYKNMMLFYTEKEV 455 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + L + A Sbjct: 456 LSGED---------------------IFDSL---------------------GLKEALHP 473 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL------DQERISQRF 654 A+ + + I + + + + +A QE + Sbjct: 474 TSADYQQDAKQVLDFLNQICTYSREKKLNMSDGIREFLNGMALGTIESPEDTQESAEKEE 533 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 G V + TL + + F V ++G+N G+ P + + + +++R Sbjct: 534 AGGRVKLMTLHASKGLEFDTVFIIGVNPGLLPIRCSSFD--------------QEEEERR 579 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 LF + A+ L +SY + S ++ + + + + + DE + E Sbjct: 580 LFFVGITRARNHLELSYYTNPGEPGVLGSYSNYLKMIPEELLEWKEIRSDEEKRTNLKEL 639 Query: 775 RVKAHLTCLH 784 +A Sbjct: 640 TRRAKEEIRK 649 >UniRef50_B5VVV9 ATP-dependent nuclease subunit B-like protein n=3 Tax=Arthrospira RepID=B5VVV9_SPIMA Length = 883 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 56/593 (9%), Positives = 156/593 (26%), Gaps = 102/593 (17%) Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 + H+ + + E+ + ++ ++ + ++ I+++ D +Y+P + Sbjct: 230 PHKVQCHIYPNLEAEIRGVLSQVKQLIID--GVSASKIVLVTQDEKTYAPLL----LDIA 283 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 + LP + + ++ + L+ Sbjct: 284 WEYQLPLRLFYKIPLRNIRLGYWIALLIE------------------------------- 312 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 V E+ + + W + A G S+L + Sbjct: 313 ------VIENNFPFESTAKLLHHPLARYLTYKQWLEARQKRPNNLAEWEELGLNLSLLKF 366 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 +S L + + ++ + + +W A Sbjct: 367 PQSD--------TLPNWVDRIKQVLKFFDIRKNSSQWSREIV---------------AFN 403 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 +E W + GD + ++ + + + ++ + G + + T + ++ Sbjct: 404 QLETAWLEL-----SKLDGDRLNRQEFFQDILEIITKLKVPMQPGKGGIEVHTPLSLQGA 458 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG----------DRSRRDDDRYLFLEAL 720 + V L+G +G+ P + + + D ++R++ F E L Sbjct: 459 SYPHVFLIGFQEGILPAAIENDPVLDFYESRRLSQFNITLETAIDIAQRNE--LCFYELL 516 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 + L S + + PS L + + + Sbjct: 517 RIPTKSLTFSCAEQHHK--KPLLPSPYSTRL--------GIETTPPPLLNLASIEEARRY 566 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 +++ E + ++ + + L Sbjct: 567 YLQQPYQ-LSNDVIVNDIIKNWQVEQRRESGESPDEYDGVIGIGVDYQNRIFSASQLTAL 625 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR 900 P + F L + +E + G R ++ + L L++ + RR Sbjct: 626 GQCPFKWFATYLLCLKEPSEAEA-------EITGSLRGRLYHRCLEILLKDIKTQTDLRR 678 Query: 901 FRAAGDLPYGAFGEIFWETQCQE-MQQLADRVIACRQPGQSMEIDLACNGVQI 952 + E + + + + +E++L + Sbjct: 679 LDIQDINQALSQAEAALQAEENVNFDKFIGWEARRLEGLNMLELNLQAEDFLL 731 >UniRef50_B1XR08 ATP-dependent nuclease subunit A n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XR08_SYNP2 Length = 1075 Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats. Identities = 84/801 (10%), Positives = 190/801 (23%), Gaps = 178/801 (22%) Query: 273 ELPLFRDSENAGQLFNSDGEQDVGNP----LLASWGKLGRDYIYLLSDLESSQELDAFVD 328 E P RD E NP LL + + L + Q + F Sbjct: 342 EDPAVRDYYKERWRAYLIDEFQDTNPTQGKLLEALTGRSEEQSKLTIVGDDKQSIYGFRR 401 Query: 329 VTPDNLLHNI----------------QSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS 372 + +S + + + +++ Sbjct: 402 ADVEVFRAWRSQLNNGVALTQSFRTHESLVKNINTVFRPVLGELHQDLDAHRQEAPHDPL 461 Query: 373 SITFHV---------CHSPQREVEVLHDRLLAMLEED-----------PTLTPRDIIVMV 412 + + + + E + + + ML ++ + P+DI ++ Sbjct: 462 HLEIYRFAPKEKMAIAEARKVEAQQIAQLIYEMLSQEMLVWDKATRKLRAIAPKDIAILS 521 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 D ++ A A +P+ S P +SLL + ++A Sbjct: 522 RTWDPL-----DIYSQALAQWQIPFLQSSGGNLLDTPEALDGLSLLQFIANPNDDLALVA 576 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 +L P L +++ L LR + + Q +L Sbjct: 577 VLRSPFLT----LSDRLLYELR-----------PQKKDKKWWSCLKDSQQPEVQQRVTIL 621 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 + +L + + ++ +L +L WR L Sbjct: 622 KQLLNKRDIFTPSQLLQLADQLTGYSAVITNLPQAERRLADWRGFL-------------- 667 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 ++L + + + + + Sbjct: 668 ELLRHLEQGTGD--------------------------VLSVVRRLQRFQRHGVKIPRPP 701 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD----------------- 695 V++ T+ + + + VV + + + + FD Sbjct: 702 LEAENAVSLMTIHAAKGLEWSVVIVPDLT-RKLSNTSSSILFDPEFGVALKQRDDQGKLQ 760 Query: 696 ---LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 L + + + AL A+ +L ++ + Sbjct: 761 KSVLFQLLEGHQKERETAEAKRVLYVALTRARDRLILTTPKEKGGG-------------L 807 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 D + + ++ D A W Sbjct: 808 DLLQPGLEDFAIKDISPDLYPP----------------------------AEPWCEGDES 839 Query: 813 AGKAHSEFVQPLPF-TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI 871 + + P + +P+ L + P + +F+ ++ TE Sbjct: 840 SKPQQPPQLLLEPARSYGLELPMTALTTYARCPKKFYFEQIIRHPGLTEGESNY------ 893 Query: 872 LEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV 931 G + + L + LP E Q + V Sbjct: 894 --GAAIGSLTHTALEKDYQTV---EQLNFHNQDLKLPPDKVQEALDLAQTFRTDPVFAAV 948 Query: 932 IACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASG 991 A + + ++L N + + G V + +L + + A+ Sbjct: 949 QAGEKE---IALELRQNQLVLNGRADLVGTNFVLDVKT-DSKPNPIEHRFQLWAYARAAE 1004 Query: 992 GNGESRLFLRKDGEWRFPPLA 1012 +LR+ + F P Sbjct: 1005 KPTAYIAYLRQRQLYTFSPTD 1025 >UniRef50_Q0ATK6 Putative uncharacterized protein n=2 Tax=Hyphomonadaceae RepID=Q0ATK6_MARMM Length = 1016 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 83/685 (12%), Positives = 164/685 (23%), Gaps = 105/685 (15%) Query: 319 SSQELDAFVDVTPDNLLHNIQSDILELENRA----VAGVNIEEFSRSDNKRPLDPLDSSI 374 ++ ++ D+L + I E A I E + + + Sbjct: 282 DRLQMPSWPGAAEDSLAERRRRLIAEALRPADTTDEWLKRIGELQGRFGDSFFNDGMTGL 341 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + E L +LE TP ++V + + + Sbjct: 342 SLVETADEISEARACALMLREVLE-----TPDRTAILV----TPDRMLARRVSAEMTRFG 392 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA--RFDITEEGLRY 492 + S A LL + + AL P+ A R T L Sbjct: 393 VRLDDSGGAALAETMAGAFLTRLLDVALDCGRVVALTALWGSPLFRAGHRRGQTHTVLAK 452 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 R ++ + GQ+ F R + ++ +L + Sbjct: 453 FEAEAL----RGARPGRDLAAVRARLDGQYVRLFDEDRATINAILDQLDTSLAGLLTPGK 508 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 S A E EAA L+ Sbjct: 509 RSASAWAR------------------AHAEAAEALASDDSGSGAQAVWVGEGGEAAAGLL 550 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PVNICTLMPMRSIP 671 + ++ + L + R++ R + + + R I Sbjct: 551 RSLLEE-------SESLPDMSLPEYAAAFGEMCRSRRVAPRLGVHPRLQVLGPLEARLIT 603 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA----LISAQQKL 727 V L G+N+GV+P + + G + +R L A ++A + Sbjct: 604 ADRVILAGLNEGVWPPGPGADPWLSPGMRRTVGLGAP---ERRYGLAAHDFAQLAAAPDV 660 Query: 728 YISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 ++ G+S + S S + L + + A + A + L Sbjct: 661 IMTRSGKS--EGSPTVASRWLWRLKTLARGALGAAAEAAFAPETDYAALSRRLD------ 712 Query: 788 PFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRA 847 + A P P + + ++ + P Sbjct: 713 --------------------DPGAPPRAAPRPQPAPPVPVRPRQMSITEIRTWVRDPYSI 752 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNA---LVEQDDAERLFRRFRAA 904 + + L + PD R L A E ++ A Sbjct: 753 YARHVLGLRRLDPADMPPD-------ARERGSALHDALEAVVPAWSDGIPEDAVKQLVAH 805 Query: 905 GDLPYGAFGEIFWETQCQEMQ--QLADRVIACRQPGQS-------------MEIDLACNG 949 +L G E + + + A ++ ++ M + Sbjct: 806 AELKLAEAGFGPEEMVLERARFERAASWLVGWEAERRARGIHLDKVEIFGSMPFEGPAGP 865 Query: 950 VQITGWLPQVQPDGLLRWRPSLLSV 974 +TG + R Sbjct: 866 WTLTGRSDRFDRHPDGRLDIIDYKT 890 >UniRef50_A6NVW3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVW3_9BACE Length = 1206 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 66/483 (13%), Positives = 130/483 (26%), Gaps = 103/483 (21%) Query: 385 EVEVLHDRLLAM------LEEDPTLT----PRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 E L R+ + + + T D++++V +S + A +R Sbjct: 542 EARFLAKRIKELKDGGFPVSDGEGGTRPAGYGDMVILVRSPNSVLHH----YARALGERD 597 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P+ + +SLL + D+ ++++L PV + T + L LR Sbjct: 598 IPWEADAGGDYFETTEVSVALSLLQIVDNPRQDVPLISVLRSPV----YGFTADRLAVLR 653 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 A + +++ E Sbjct: 654 -----------------------------------------AASPDTDFYAALVKGAEEG 672 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEE-WLPVCRDMLNAFFLPDAETEAAMTLIE 613 G+ A+ L +L R + W R L F E E + Sbjct: 673 GVD------CAAFLAELEDLRFRSGDRNSHQLLWQIYDRTNLLGIFGAMDEGEKRQGNLL 726 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-AGPVNICTLMPMRSIPF 672 + + A + L + Q G V I ++ + + F Sbjct: 727 -ALCELARQFEAAGHKGLFGFLTYLTRLRDNGGKLAAPQAAREGGGVRILSIHKSKGLEF 785 Query: 673 KVVCLLGMND-----------------GVYPRQ-----LAPLGFDLMSQKPKRGDRSRRD 710 +V L G+ GV P++ + ++ + Sbjct: 786 PIVLLSGLTRRLNRDDMQRPILFHPQLGVGPKRLDTERMIEYPTLARRAVARQLEYEMMA 845 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 ++ L A+ A++KL +S +L + Y + L+ Sbjct: 846 EELRLLYVAMTRAKEKLILSCALTRGA-----------ADLRKLAEDAEYPADPQVLSGC 894 Query: 771 ESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE 830 +S + L L + A E P S+ +QP P Sbjct: 895 QSVGQWVL-LPVLTRPDAVAIRRAADYPLPIAAAELGPDWDIRWVDGSDLLQP-PERKTA 952 Query: 831 TVP 833 + Sbjct: 953 VLS 955 >UniRef50_Q0G5V0 Helicase, UvrD/Rep family protein n=2 Tax=Aurantimonadaceae RepID=Q0G5V0_9RHIZ Length = 1211 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 80/597 (13%), Positives = 152/597 (25%), Gaps = 99/597 (16%) Query: 386 VEVLHDRLLAMLEED-------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 + + D++ L + L P D++++V ++ P + A A +R + A Sbjct: 570 AQRIADQIAEWLGDPIVEKGRIRPLDPGDVMILVRKRTNFIPAMAA----ALRERGISVA 625 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 +DR H ++ I+L + + + ALL P+ F+ T++ L L Sbjct: 626 GADRLTITEHIAVQDLIALGRVAANFEDDLSLAALLKSPL----FEFTDDELMAL----- 676 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 L GL ++ + P A Sbjct: 677 ----------------ALSRGPLEHLSAGLRKLGGEEGPGRVPDWFPDGEP-------AA 713 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 L+ + +L+ R E +L A Sbjct: 714 RLLEKAHHAIERLDELRNRTG----FESVFTFYARILGPEGGRSKLMARLGRDTADVIDA 769 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + L L +L + + G V I T + + VV L+ Sbjct: 770 FLDLALSEDTAGVSGLDAFLSDLEAAPPEIKREMEGGRGEVRIMTTHASKGLEAPVVFLV 829 Query: 679 G--------------MNDGVYPR--QLAPLGFDLMSQKP----------KRGDRSRRDDD 712 M PR GF + K + + ++ Sbjct: 830 DPGSAPFHGSHGSRLMRWEEMPRLLADQAPGFLWRAAKEVENSAIAALREIEKQRAEEEY 889 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 R L + A ++L I + R PS + + + + +E + Sbjct: 890 RRLLYVGMTRAAERLVICGMA------GTRGPSE--EAWREKVESALKPHAEEITDMAGD 941 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV 832 + + P R + Sbjct: 942 PVCWRIGSRRMGKPETERPDAANLAVRALDLSRLEEEVAPPRPLTPSSAGAAFEADELES 1001 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD 892 + L+ + + P G+ R + +LL L Sbjct: 1002 SV--LEEQNTAETAY-------ASPVLGTAATPSL------GIQRGLVVHRLLQHLPT-L 1045 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD--RVIACRQPGQSMEIDLAC 947 +E R A G+ + +Q+L D A G E+ +A Sbjct: 1046 ASEERERAAEAYVRRALPQVGDTHRKQLLASVQRLMDDPAYAAIFAEGSRAEVAIAG 1102 >UniRef50_B8N0A9 ATP-dependent DNA helicase, putative n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8N0A9_ASPFN Length = 787 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 55/564 (9%), Positives = 129/564 (22%), Gaps = 138/564 (24%) Query: 295 VGNPLLASWGKLGRDYIYL--LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAG 352 VG+P + +G + L + L S + D + IL + Sbjct: 107 VGDPDQSIYGFRSAEIKNLTRMQQLYSDTSVVLLEDNYRSS------GSILSSAQDVIEQ 160 Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE-EDPTLTPRDIIVM 411 + R + + + + E + + + + L D ++ Sbjct: 161 DSSRPAKRLQPTHSVGTMP---VLRKLPTAEAEAQWIVLEIKRCIAMTGKLLKYSDFAIL 217 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 + + S + +PY + ++ + L + ++ +L Sbjct: 218 LRSAA-----LSRQIESEMGKQGMPYRMVGGLRFFDRVEIKLLLDYLRVISQPGNTDALL 272 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +++VP I EE + R Sbjct: 273 RIINVP----SRKIGEESI---------------------------------------RS 289 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGH-----LASLLMQLNIWRRGLAQERPLEE 586 L+ A ++ + W + + + + L + + + R L + Sbjct: 290 LMSGAEKANKPLWDFMKDVAQGRRSTEKTLSKPTSNGLGNFVGLIESSREKLLECTDCSA 349 Query: 587 ---WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 L L+ + + ++ + Sbjct: 350 PKKLLEFVIKKLSFREYLTSTYGTNEENKWANVEELMGQAEDTAAA-------------- 395 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 V +G+ P A Sbjct: 396 ------------------------------AVY-----NGIIPHSRAEDS---------- 410 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE--LIDYIGQSHYL 761 D++R L A+ AQ LY+SY + S + E + Sbjct: 411 ------DEERRLLYVAMTRAQALLYLSYPLEQSRSGETTSVSTFLPEKIIESRFRLLGPN 464 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFV 821 ++ + R + + RE A + + + Sbjct: 465 LHEQIVYAIADILRRPRPTLEAMLEGQVSLPSTLDDQWTVDGREAADAVFRWDGSRAVDG 524 Query: 822 QPLPFTLP---ETVPLETLQRFWA 842 + P + T + + Sbjct: 525 EEPSAKRPRYSRESSISTTTTYVS 548 >UniRef50_A3YTS6 ATP-depentend DNA helicase n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YTS6_9SYNE Length = 602 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 64/470 (13%), Positives = 124/470 (26%), Gaps = 98/470 (20%) Query: 311 IYLLSDLESSQELDAFVDVTPDNL-----------LHNIQSD------------------ 341 LL L + + FV D L L +Q+ Sbjct: 198 FRLLCSLVPEERPNLFVVADDDQLIYQWNGANPKRLQELQNRFSVEIVQLPENYRCPPAV 257 Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 I N + ++ + D+ + ++EVE + D L + Sbjct: 258 IELANNLIIHNLDRSAGKERLRAHKVSTADTHLRVFYFGDFRQEVEWVVDELKKTPPDSR 317 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 T +V+ + AV + P IS R+++ + + L L Sbjct: 318 NST----VVLGRSKK----LLDAVITEC-KQQGFPAYISIRKSQFISAPVTWLHAALRLA 368 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 ++R E + + + E D + + Sbjct: 369 NARQDREQLRRVCK------------------AFFSLEGNNIRVEDVVATSSFQGGDYLR 410 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 L + + A + + E + H + W + + Sbjct: 411 GWLEAALDQQTVSVATRGF---------LEHMKNTLLERLNHWL-FIDSAFRWLDAIQNQ 460 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + + W + E + D V L L E Sbjct: 461 P-----------------AATDNAFDEYQVEKDVWFLLQQEVIQQYGKDEVSLHSLLQEF 503 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 R + V T+ + + FK V LLG+ + P + + Sbjct: 504 DLRSKEAP----PPKDAVRCMTIHSSKGLEFKRVYLLGLVEDQLPSW---------AARK 550 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 K D ++R A+ A+++L +SY + PS + E+ Sbjct: 551 KGDDSFEMSEERRNCFVAITRAEEELILSYS--DRYFGYPKTPSRFLTEM 598 >UniRef50_C5CHI0 Exodeoxyribonuclease V n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CHI0_KOSOT Length = 991 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 96/833 (11%), Positives = 218/833 (26%), Gaps = 169/833 (20%) Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS--DGEQDVGNPL 299 N + + L + R + L + ++ L + D + Sbjct: 232 NNSLDFDDLLIKTRDLLHNFPQLREKYVRRFKYILIDEFQDTDWLQKTIIDYLHEEERNF 291 Query: 300 LASWGKLGRDYIYLL-SDLESSQELDAFVDVTPDNL-----LHNIQSDILELENRAVAGV 353 L G + +D+ A ++ +L D++E +NR + + Sbjct: 292 LLFVGDAKQSIYRFRGADVTVFNRTKAEFEIKNAHLETLSVNRRSHPDLVEFQNRLFSKI 351 Query: 354 NIEEFSRSDNKRPLD-----------PLDSSITFHVCHSPQREVEVLHDRLLAMLEED-- 400 +++ S K D DS + V + +V+ + +L E+ Sbjct: 352 MLQDRSGKYYKSIYDTEVSAIPYEQDSNDSRVRVLVSENSDD-SQVVAQYIKNLLSEEIT 410 Query: 401 ----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 + P DI +++ + S + A + +PY +A P Sbjct: 411 FRNKDGSYSTRKIKPGDIAILLRKFVNVSRY-----EDALEENGIPYYTVGSKAFYDRPE 465 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 + ++ L + L P F T E L L+ Sbjct: 466 IAGPLAWLDVIVDPLDDAAFARFLLSPA----FGATFEDLFELKS--------------- 506 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 + D E L L ++ Sbjct: 507 ----------------------------------KEKHISDAILKTTDERFKPLRELFIK 532 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 + + L+ L++++ + E A+ +++ I E Sbjct: 533 YSELKHVLSPSSVLQKFVDETEYLPK--LASMKRGERAINNVKKML-EIAKELDRLGTSL 589 Query: 631 AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL-----GMNDGVY 685 S ++ + + E + + V + T+ + + F VV + G +DG Sbjct: 590 RELSSNIKAFIDSSEETEATLETEESDSVKLLTVHKSKGLEFPVVIVADTFWKGKSDGSP 649 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDD------------DRYLFLEALISAQQKLYISYIG 733 G+ + ++PK+ + ++ A A++ L +S G Sbjct: 650 YILTGEDGYIVSREQPKKESDTIESQLHLEEKEKNLEEEKRTLYVAFSRAREMLVVSLNG 709 Query: 734 RSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 + + + + ++ E + + Sbjct: 710 KKATSDRP---------WSQMLQGTLITGENQLCEDMEDLVEIVE------PGEAVREEP 754 Query: 794 YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRL 853 E++S+ +W + + + L Sbjct: 755 ESIEEKESFIIQW--------PDIEFIKSVDDRSYIKYISPSLLAE-------------- 792 Query: 854 QVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL-VEQDDAERLFRRFRAAGDLPY--- 909 +F E SE + I + + +L A+ + +G +P Sbjct: 793 --DFTIEISESEPGDILIRKPRELGTLTHSVLEAVGIRGRTGRVTTLESLLSGGIPASVD 850 Query: 910 -----GAFGEIFWETQCQEMQ-QLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDG 963 EI + + + L + + ++ + + G + ++ Sbjct: 851 RIRFSEEDYEIVRKILYKLIDHPLIKEIETSDEAMSEVQFQKKFDRYVLLGIVDKLYR-V 909 Query: 964 LLRWRPSLLS---------VAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWR 1007 WR Q+ + ++L KDGE R Sbjct: 910 NGNWRILDFKFAEFSQKSFPKYEFQMKFYLYILKELLAPECAKLLFLKDGEVR 962 >UniRef50_Q2SPC8 Superfamily I DNA and RNA helicase n=4 Tax=Gammaproteobacteria RepID=Q2SPC8_HAHCH Length = 776 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 91/673 (13%), Positives = 185/673 (27%), Gaps = 113/673 (16%) Query: 167 PLWKALVEYTHQLGQPR--WHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYL 224 LW+ L + + Q ++ + L+ + T L + + L Sbjct: 142 QLWQLLRRHAPESHQDSVKRNKKEYIELASRLLDMSKTSLLPLQT---VF-------EQL 191 Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG 284 + + L IE+ W A +L + E +L + Sbjct: 192 EYRKELAFLIEVV-----NSFEAWRKSHSRISFADMLYEPVKCLQESPDLVKLVADKMDV 246 Query: 285 QLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE 344 L + + + LL + R + + Q + F P+ +L+ + Sbjct: 247 ILVDEYQDTNEIQHLLLRYIAGARA--RVTVVGDPDQTIYEFRGAQPEFILNRFAEEFES 304 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQ-------------REVEVLHD 391 ++ + L + +C S + E L Sbjct: 305 PREFTLSYTFRYGHKVALLANHLITHNHGRKDLLCRSHKGTPSTDVNVLQGGDETRQLVL 364 Query: 392 RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVL 451 +L +L + P DI ++ P A +PY I + ++ + Sbjct: 365 QLGRLL--NGGGEPEDIAILFRVWSQAVPV-----ELALLAHRIPYRIDGDKGALANREV 417 Query: 452 EAFISLLSLPDSRF-------VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 +L + R +E + LL P + + ++ LR L + + W Sbjct: 418 MHIQYVLEMASGRLGMLEENKRAEVLAGLLRFPHV----GLKDDTLRELAHILAQHDAHW 473 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 G +L + R L A Q+ + G A++V Sbjct: 474 GD--------QLLEWIPDSLHALQKRKLKRTA--------QAWSLLPKMKGSAADIVRFY 517 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 +E + + Sbjct: 518 IDDTELFKTLEELALTHDTADERI-------------------------NNVLGVEHYLA 552 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 L DEL + ++ G V + T+ + + + VV L+G+N+ Sbjct: 553 TLNLPSLETLQHF-DELRRLASAQKQQ-----GGVTLSTMHRTKGLEWPVVMLIGLNEQY 606 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD--NSER 742 P + + +R L A+ A++ LY+ + + + + Sbjct: 607 LPYSMRGGEDIV----------DHLQAERRLLYVAMTRAKEALYLFTPTLNDKTALSKDD 656 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 PS V+E G+ +++A AH P + Y Sbjct: 657 KPSRFVKE---ACMDVSMAVGEFLDQRKQTDANDSAHYESGQRLTPIATRYLDWHNVN-Y 712 Query: 803 AREWLPAASQAGK 815 + AAS+ + Sbjct: 713 EQPAQAAASEPEQ 725 >UniRef50_Q836J8 ATP-dependent helicase/nuclease subunit A n=35 Tax=Bacteria RepID=ADDA_ENTFA Length = 1264 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 61/532 (11%), Positives = 143/532 (26%), Gaps = 126/532 (23%) Query: 385 EVEVLHDRLLAMLEE-----------DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 E+ V ++ ++++ D +T +DI+++ + + Sbjct: 559 ELYVTALKIRELIDQNFLIYDKKLKTDRPITYQDIVLLTPTKKNNLTIL-----DVFKSL 613 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P ++D + + I+LL L D+ + + A+L P++ + E L + Sbjct: 614 EIPVQVNDAQNYFQATEIRTMIALLQLIDNPYQDIPLAAVLRSPIV----GLKENELVLI 669 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R +++ L +++ Sbjct: 670 R-----------------------------------------LANKETSYYEAFLTFNQK 688 Query: 554 SGLIAELV---GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 E L WR + + + L +L Sbjct: 689 MEPTMEEAVVQEKTIRFAESLEKWREQARRNQ-ISNLLWTIYR--ETAYLDYVGGLPVGK 745 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF----LAGPVNICTLMP 666 + A++ + L + + ++++ V + T+ Sbjct: 746 QRQANLYALVDRAAAYEKTTFRGLFQFVRFIEKMQEKDKDLAEPVVLSEENAVRVMTIHA 805 Query: 667 MRSIPFKVVCLLGM---------NDGVY-------------PRQLAPLGFDLMSQKPKRG 704 + + F VV +L M N+ P + + Sbjct: 806 SKGLEFPVVFVLDMTKEFNVSDLNERYIFEENLGVGIRYLQPEERVMYDTLPFLAIKQVR 865 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRS-------------------IQDNSERFPS 745 R ++ AL A+QKL++ + +N + S Sbjct: 866 LRKLLSEEMRKLYVALTRAEQKLFLVGSYKDQAAMWKEWLKVGDVETLVLPAENRLQSKS 925 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 L+ + + + + + +VK H H F+ + + +Q E Sbjct: 926 SLMNWVGMTLVRHQKADEYQQEVVVSNVPQVKKHPANFH-IQWFNEEQLRAAIQQLQLPE 984 Query: 806 WLPA-----ASQAGKAHSEFVQPLPFTLPETV--------PLETLQRFWAHP 844 A + + + L F P V + ++R + P Sbjct: 985 RQAEDLAEKAQLSADKINRGLARLSFNYPFEVATRTTSYQSVSEIKRVFDDP 1036 >UniRef50_C9KJP8 ATP-dependent nuclease subunit A n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJP8_9FIRM Length = 1283 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 59/488 (12%), Positives = 125/488 (25%), Gaps = 95/488 (19%) Query: 386 VEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + + DR+ ++E L RDI V++ + + Sbjct: 601 AQHIADRIAGLMESGYRVFDKDAGGYRPLAYRDIAVLLRAVKGKAN----TLLELLRKNS 656 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P + ++LL D+ + A+L P+ T E L LR Sbjct: 657 IPAYADVDGGYFEANEVRLVLALLKTIDNARQEIPLAAVLVSPI----GGFTMEELARLR 712 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 ++ + + + Sbjct: 713 ----------------------------------------MSVPDEDLFGALLRSHSPET 732 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 L L A LN WR E + R+ ++ + + Sbjct: 733 PLEEGLADRAADFCASLNRWRSYAVSHSVPELIWKLYRETGYYDYVGGLKGGLLRQANLR 792 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ--RFLAGPVNICTLMPMRSIPF 672 AE Y ++L +R +++ V I ++ + + F Sbjct: 793 MLADRAAEYEKTNYRGLFRFLRFLEDLRKRDTDLSVARTLGASEDVVRIMSIHKSKGLEF 852 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQK---PKRGDR----------------------S 707 VV + + G + + A F L + P+ +R Sbjct: 853 PVVIVADIAKG-FNQLDARGTFLLHKELGIGPRLVERSTVGRQMYDTLPYQAIGARIVAE 911 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 + ++ + A+ A++KL ++ + + + + D+ + Sbjct: 912 TKAEEMRVLYVAMTRAREKLILTGTLAAAKWEKQA------ARYARSLDSRELALPDDMI 965 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT 827 +S A HT + + A +E +Q P Sbjct: 966 READSYLDWIAPAVARHTDGAPIREAAGVDWGEMLDAVEPAAHFAVNLLSAEAIQ--PRE 1023 Query: 828 LPETVPLE 835 E + Sbjct: 1024 EQEELDAT 1031 >UniRef50_A9VDB1 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9VDB1_MONBE Length = 675 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 66/489 (13%), Positives = 138/489 (28%), Gaps = 75/489 (15%) Query: 245 RYYWGDIKDPA-------YLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 R W D D + + ++ + A +L VG+ Sbjct: 49 RQNWLDFDDQLLNCDKYLEQNSQIKPFKHVLVDEFQDTNLIQYTMARRLAADGNLFVVGD 108 Query: 298 PLLASWGKLGRD---YIYLLSDLESS-QELDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 P A + G ++ + D S+ Q+++ + + S L + Sbjct: 109 PNQAIYSWCGAQPNIFVRIQKDYASNVQQIELRKNYRSTKAILKFSS---TLICQQQLSS 165 Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT-LTPRDIIVMV 412 + + K+ + S Q E+ + T L D +++ Sbjct: 166 DASQSDSQGTKQATQEQGPDVCLTTYPSLQEELSGIVQIFSQTANRAKTSLRYSDFAILL 225 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR-FVSEDVL 471 + +LPY ++ + + ++ L L + R + Sbjct: 226 RTNATLCNV-----EQELKIHHLPYRLAGKTGPFQSQEVGDLLAYLRLINDRSDDDDAFK 280 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 + + P I + L L E Sbjct: 281 RICNRP----SRGIGVQTLNKLDNLAKEQKTSLFSAAAT--------------------- 315 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 + P + LIAEL G L + +L+ + + + +E EE + Sbjct: 316 -------------SQLKPAKSFADLIAELRGRLGNF-KELSEYIQMVIKEIKFEEHVK-- 359 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL-SLLRDELAQRLDQERI 650 A D E T + + +I Q + D++ + + I Sbjct: 360 -KTCKAAKTDDEHGENDFTRRWKNVELLIDCATSTQQQQCQQHGAKASDDVERSIQDLLI 418 Query: 651 SQRFL-AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 + + + + T+ + + + VV + +ND YP GD + Sbjct: 419 NFVERYSDGITVSTVHKAKGLEWAVVAVPDVNDHNYPHINTQHD----------GDDAGV 468 Query: 710 DDDRYLFLE 718 D++R L + Sbjct: 469 DEERRLLYQ 477 >UniRef50_UPI0001C41A07 ATP-dependent DNA helicase UvrD/REP family n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41A07 Length = 1546 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 58/435 (13%), Positives = 139/435 (31%), Gaps = 60/435 (13%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEV--LHDRLLAML 397 ++I+E + + ++ K + S + + +RE+E + + + Sbjct: 374 NEIIEFSEQYIKMQRGKKSR----KNLREARKESRNIYYIENEEREMEAASIAKIIKGLK 429 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 +E+ D+ V++ + + S I VF +P+ + + ++ +++ ++L Sbjct: 430 DEEKIKNYNDVAVLLRSVLTSSKDIINVFNDE----NIPFQVKGLQDLENKDEIKSILTL 485 Query: 458 LSLPDSRF-------------VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 L ++ A + ++ E + + E + Sbjct: 486 LHFIIEDDNPQETPIITFWEADWLNLRAFTNADFKQTFIKLSSET----EEILIEKQKEF 541 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS----------VLPYDESS 554 + N +L + + + +L E ++ + Y ++ Sbjct: 542 EENVFNYAKLIYNDITGNRFTKRSYKGVLELEDEVLDAVFKEYPKPVLTNKTLREYGITN 601 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPL---EEWLPVCRDMLNAFFLPDAETEAAMTL 611 E L L ++ + + + + L+ ++ D + + A+ Sbjct: 602 EDDLEFFNQLNELKFEIFGDDKDFDERPTILNVYYRILEICGFLSEDYIFDPKNKQALDY 661 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 I + II E + L L + VNI T+ + + Sbjct: 662 I-GLFTQIIYEYENIISNR--DIRGLYWFLNSNIKNYSYD-IENENGVNIMTIHKSKGLE 717 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFD---------------LMSQKPKRGDRS-RRDDDRYL 715 F VV L G+ND +PR+ L L + + D + +++ Sbjct: 718 FPVVILAGLNDSSFPREYEDLRETKYKNGSAVFYTPRECLRYKSLDKDDVTLHYEEEERN 777 Query: 716 FLEALISAQQKLYIS 730 A+ AQ L +S Sbjct: 778 IYVAMTRAQDLLILS 792 >UniRef50_Q5CVQ2 UvrD like super family I helicase involved in nucleotide excision repair, possible bacterial horizontal transfer n=2 Tax=Cryptosporidium RepID=Q5CVQ2_CRYPV Length = 917 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 44/479 (9%), Positives = 128/479 (26%), Gaps = 95/479 (19%) Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSIT--FHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 V+ +++ +K + D + + E+ + +L +L+ + Sbjct: 426 QVSNNLVKKNKFRISKLLISNNDFGVEPVVYYFPKQIDEMHWIASTIL-LLKMKFNYSWS 484 Query: 407 DIIVMVADIDSY---------SPFIQAVFGSAPADRYLP---------------YAISDR 442 + ++ D+ F+ + + + I Sbjct: 485 EFAILARTNDTLFYVEKLLSDKKFLISCLEMLQDTENINNERGWFKMISNDLLDFDIDQL 544 Query: 443 RARQS-----------------------HPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 +S + +S L + L + + P Sbjct: 545 SRYKSAEITFPLENTSRNNPKFASDLLYRAEILDILSYCRLMIDETADDCFLRICNRP-- 602 Query: 480 AARFDITEEGLRYLRQW-VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 + I + ++ + ++ + EL + T ++ M Sbjct: 603 --KRGIGDNAIKLIEEYGAKGISLMRKSTQPLNGICELDTSVYGNTTNVYTSIVSVCRML 660 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC------- 591 + + + L L + + + + E + + Sbjct: 661 VSSKFETKSKINYKLHKKSINSIKAFLDFLDDLKQFIKN---KVSVSEIINLIVKKMNLD 717 Query: 592 -----------------RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ-YGDAVP 633 ++++ ++E + +I ++ Y Sbjct: 718 NQNEIMVKQSKNKRLLQSNLVDNINSNTEDSEKINSRKLSTLSSISTLLKYSEPYTPNDE 777 Query: 634 LSLLRDELAQRLDQERIS--QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 + L L Q +++ T+ + + +KVV + D V+P Sbjct: 778 QPTGYECLLCFLQDASNGLLQIKKGEKISLSTIHRAKGLEWKVVFIPKFVDKVFPLYRES 837 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 ++ ++ D +++R + A A+++L++S + PS +Q+ Sbjct: 838 ENLEIKNEF----DEITIEEERRIVYVAFTRAKERLFVSVPLNVGK------PSPFIQD 886 >UniRef50_Q3DPK7 Exonuclease RexB (Fragment) n=3 Tax=Streptococcus RepID=Q3DPK7_STRAG Length = 319 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 52/356 (14%), Positives = 110/356 (30%), Gaps = 52/356 (14%) Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 + + L + +DI+V++ D+DSY + +F +PY +H Sbjct: 1 MARAIRQKLYQ--GYRYKDILVLLGDVDSYKLQLSKIFEQY----DIPYYFGKAETMAAH 54 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 P++ SL + RF +EDVL L + I+++ L Y +++ + I+ Sbjct: 55 PLVHFMDSLSRIKRYRFRAEDVLNLFKTGIYGE---ISQDDLDYFEAYISYADIKG---- 107 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 P + G + LG Q + + + + L + Sbjct: 108 --------PKKFFTDFVVGAKKFDLGRLNTIRQSLLTPLESF--VKTKKQDGIKTLNQFM 157 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA-MTLIEQQWQAIIAEGLGAQ 627 L D L+ +E E + + + I+ + Sbjct: 158 FFLTQV---------------GLSDNLSRLVGQMSENEQEKHQEVWKTFTDILEQFQTIF 202 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 + + L L + Q V + + + + V LGM +P Sbjct: 203 GQEKLNLDEFLSLLNSGMMQAEYRMVPATVDVVTVKSYDLVEPHSNQFVYALGMTQSHFP 262 Query: 687 RQLAPLGFDLMSQKPKRGD------------RSRRDDDRYLFLEALISAQQKLYIS 730 + ++ D + + + L +A+Q+L ++ Sbjct: 263 KIAQNKSLISDIERQLINDANDTDGHFDIMTQENLKKNHFAALSLFNAAKQELVLT 318 >UniRef50_A3DE23 UvrD/REP helicase n=3 Tax=Clostridium thermocellum RepID=A3DE23_CLOTH Length = 706 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 57/458 (12%), Positives = 129/458 (28%), Gaps = 94/458 (20%) Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQ----SDILELENRAVAGVNI----------EE 357 + + Q + F P LL + + IL +E + +I + Sbjct: 254 NIFMVGDEDQSIYGFRAAFPQALLDFKKTYPDAKILLMERNYRSTKSIVIPANIFIKQNK 313 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 N + ++ F + + L ++L+ + L + V+ + S Sbjct: 314 GRYEKNMYTENEEGEAVVFKHVKNRNEQYAYL----TSVLKSESNL--SECAVLYRNNIS 367 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRA-RQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 P + +P+ I D H V+ +S + L E + Sbjct: 368 AIPLV-----DYLEYNNIPFYIRDTNLHFFKHWVVNDVLSFIRLALDPCDIEAFGQI--- 419 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 I+ E Y+ Sbjct: 420 -YYKIGAFISREMFEYV----------------------------------------AEN 438 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 M +G +++L + V +LA + ++ + + L +E+ + Sbjct: 439 MGKGKGVMETLLNFPNLPEDTCNAVKYLAGQIETID-YLKPLKAIEFIEKECEY-EKYIR 496 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL---RDELAQRLDQERISQR 653 + ++ I ++I + L ++ + Sbjct: 497 RASKEMGYSIDSLNYIIDGLKSIASRVD--------SFDEFFGRLSILKSAIENS--GKN 546 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 V + T+ + + F V ++ + DG +P + K G+ + +++ Sbjct: 547 RYKNAVVLTTIHSSKGLEFDKVYMIDLVDGQFPSSKSISDC-------KEGNDALMEEEV 599 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 LF + A++ L + I S +N S V Sbjct: 600 RLFYVGVTRARKYLEL--ITFSKVNNKPVSVSRFVHRF 635 >UniRef50_A1HTK7 UvrD-like DNA helicase, C terminal n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTK7_9FIRM Length = 1246 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 48/392 (12%), Positives = 107/392 (27%), Gaps = 88/392 (22%) Query: 383 QREVEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 +RE ++ RLLA+ E L RDI++++ + + V Sbjct: 571 EREAWLIARRLLALKEAGHVVYDKHDKAYRPLAWRDIVILLRTVQGKAG----VLLDVLR 626 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +P ++ +SLL++ D+ + +L P++ +T L Sbjct: 627 QAGIPAYADVDGGYFEETEVQVMLSLLAVIDNPRQDIHLAGVLRSPLV----GLTAGDLA 682 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 +R + W ++ Sbjct: 683 AIR------------------------------------------LCKDGDLWTALTAAA 700 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE-WLPVCRDMLNAFFLPDAETEAAMT 610 + + L + L +L+ WR + E W + Sbjct: 701 G-ADIAEPLRQKIGVFLERLDRWRSLARRRGVAELIWSIYRETGYYDYIGGMPGGALRQA 759 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ--RFLAGPVNICTLMPMR 668 + + + + L R +++ V + ++ + Sbjct: 760 NLR-VLYDRARQFEATNFRGLFRFLRFLERLRDRGSDMAVARALGEGEDVVRVMSIHKSK 818 Query: 669 SIPFKVVCLLGMND-----------------GVYPRQLAPLGFDLMSQKPKRGDRSRR-- 709 + F VV L + G+ P+ + P D + G + Sbjct: 819 GLEFPVVVLADLGKQLNLRDTQELVLCHKELGLGPKVIRPDLRDSYPTLARWGIEHKLTL 878 Query: 710 ---DDDRYLFLEALISAQQKLYISYIGRSIQD 738 ++ + AL A++KL + + + D Sbjct: 879 EAKAEELRILYVALTRAREKLILVGSVKKLAD 910 >UniRef50_Q9SW14 Putative uncharacterized protein AT4g25120 n=2 Tax=Arabidopsis thaliana RepID=Q9SW14_ARATH Length = 938 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 51/406 (12%), Positives = 125/406 (30%), Gaps = 58/406 (14%) Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT- 402 E ++ + + S N + D IT CH+ + + + D+++ + + T Sbjct: 451 EFQDTSTMQYKLLRMLGSHNHITIVGDDDQITVKECHNEEAQCAYVIDKIIEITNDGSTP 510 Query: 403 -LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 + DI ++ VF +A R +P+ + A V++ +++L Sbjct: 511 CCSHGDIAILYR-----RQVSGKVFQNAFRQRKIPFNV-HGVAFYRKKVVQVILAMLKTT 564 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 S + A +E + + + + + I + + Sbjct: 565 FSECDDASYRRVFK-----ALLPFEKEEKKRIIEHIEK--ISTSRKCSFISAASDIFNAK 617 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 + F +++ G V + ++ +V +A+++ + Sbjct: 618 ISGTFKRSQLTQG---RKVLQTLDMVAKLVDREQSLSAVVTCVANMI-----------PQ 663 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV--------P 633 + L E V + D + + + + I+ + Sbjct: 664 KYLLEQRAVVDNDGGKLLNEDNDLRSVLQYLMDDVAEFISTHCTTTEEEDAIKEKKGCNQ 723 Query: 634 LSLLRDELAQR-LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L + +++R + R +R V + T+ N+ P Sbjct: 724 LHSFINYISERETENFRSRRRDNENSVTLTTIHQA-------------NENEIPLLHESN 770 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 G S + +++R L A+ A++KL+ Y+ Sbjct: 771 GNASESG-------TSLEEERRLLYVAMTRARKKLFFLYVTVDSNW 809 >UniRef50_Q67RU7 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67RU7_SYMTH Length = 672 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 86/632 (13%), Positives = 152/632 (24%), Gaps = 135/632 (21%) Query: 139 LVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLE 198 L YR L + G + L E Q +Q L + L+ + L + L Sbjct: 144 LAYR--MLRHAQGGGPLRILLEDQQFQ--LIRNLMRTMGLNTDDEAVQEVLAD--LSRLR 197 Query: 199 SATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLA 258 + P G R +LPP L L ++ E K L Sbjct: 198 AEPEPPAGFRPR-------SLPPAEFDGL--LRRYAE---------------AKAEQGLL 233 Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL- 317 R P + E NP+ + +L + L + Sbjct: 234 DFDDLLHEALALLRGRPELLEGYRRRFGHILVDEFQDTNPVQFALVRLLAEPGRNLCVVG 293 Query: 318 ESSQELDAFVDVTPDNLLH---------NIQSDILELENR---AVAGVNIEEFSRSDNK- 364 + Q + + TP+ LL + + A + R K Sbjct: 294 DDDQAIYGWRGATPEFLLSFGDLYPGAAQVTLAVNHRCPAPVVEAANRLVAHNVRRLGKV 353 Query: 365 -RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 RP+ + E EV+ L + V+ Sbjct: 354 MRPVRRSGPPVRLLTPADTVEEAEVIAR-----LVREAGAPLSHWAVIYRTNQQ-----A 403 Query: 424 AVFGSAPADRYLPYAISDRRA-RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 V + +PY ++ ++ L +L +L+ P Sbjct: 404 HVLAEVLSREGIPYRTLGGLPNLYRRWPVQDVLAYLRAAAG--DRMALLPVLNRPNRY-- 459 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 + A + Sbjct: 460 -----------------------------------------LARAVAEEAARIAGATDGD 478 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFL 600 ++ V L L L + + V D L + Sbjct: 479 LLAAIGRTGLLRTWQLRPVEELEDHLRALGR----MTAPEAIAYVRSVIGYDDYLQEYAA 534 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 + + + Q L Y V + + V Sbjct: 535 RAGGRPDELLGLLAEVQRTAPRLLLPAYLGHV----------AAFSAQADRKAPEGQAVT 584 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + T + + F V + G D + P + P +++R L A+ Sbjct: 585 LVTCHRAKGLEFPRVVVAGAVDRLLPHRSNPD----------------IEEERRLMYVAV 628 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 A+++L+IS + E PS V EL+ Sbjct: 629 TRAREELWISAP--RSYEGRECRPSPFVAELL 658 >UniRef50_A3Z091 Putative ATP-dependent DNA helicase (PcrA) n=1 Tax=Synechococcus sp. WH 5701 RepID=A3Z091_9SYNE Length = 641 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 60/537 (11%), Positives = 134/537 (24%), Gaps = 96/537 (17%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIY 312 L + E P + E NPL + + Sbjct: 176 KRRQNLLDLDDVLDVVARNLENPAVASTIGNSYDAVLVDEMQDTNPLQWRLLQPLVKHTS 235 Query: 313 LLSDLESSQELDAFVDVT-----------PDN-LLHNIQSDILELENRAVAGVNIEEFSR 360 L + +Q + AF P++ L Q+ E ++ +++ S Sbjct: 236 LFCVGDDAQAIYAFRGSDYRFIHDFTELVPNSEKLTLTQNYRSPSEFLGISNWLLKDSSI 295 Query: 361 SDNKRPLDP-LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 + +K + P E E + D++ + + R ++M Sbjct: 296 NYDKELWSELEGGKPNMRIFSDPFEEAEFIADKISE--DHGRGIPYRSNLIMFRS----- 348 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + SA A R +P + + +S L + + L L V Sbjct: 349 SVWRKALDSALAKRKIPVTYYGGFSFLQARHVRDIVSTLRILHNPVDDIAWLRYLQVFP- 407 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 I EG + Sbjct: 408 ----GIGGEGASEIVNR------------------------------------------- 420 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ--ERPLEEWLPVCRDMLNA 597 + + E L+ + + ++ + E + D + Sbjct: 421 ----FADLNALAERIDLLKASDPKFRRPASAMQTIAQKISANMANLIGEITAILEDEFSK 476 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 + + + A I Q + ++ L+ + + D Sbjct: 477 LYRDEWPSRKADVPILQALAEREDSIST--FLESYALNPFTEGFQRGGDS-------NTD 527 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V + T+ + + +V + + G YP + +++R Sbjct: 528 YVIVSTIHSAKGLESDIVYVPALQVGHYPPSYTKS-------------QDEFEEERRCLY 574 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 AL A+ +L +S + + + +QE+ + + + S Sbjct: 575 VALTRAKTELNLSKALIATYQRIPKGSAYFLQEMPEQLVDLEIKHVESVNAPSLSLE 631 >UniRef50_C1XIE9 DNA/RNA helicase, superfamily I n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XIE9_MEIRU Length = 809 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 68/511 (13%), Positives = 149/511 (29%), Gaps = 101/511 (19%) Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQ 383 D F P +L I + R +++ + + L+P H+P Sbjct: 293 DTFRCPAPQVVLAG--RVIAHNQQREPKRLSLTKGFQGRVHLRLEP----------HTP- 339 Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 + + L + +L + P ++ V+V + + +P+I +R +PY + Sbjct: 340 AQAQGLVSDIAGLLAQ--GRKPGEMAVLVR-LYAQTPYI----EQCLIERQIPYRVVGST 392 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 P ++ ++ L L + L + + P + + R + + Sbjct: 393 PFYQRPEIQGLLAYLQLALNP-TKHLWLQVYNTPKRYLSRALADAVWRRVERGA------ 445 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE--LV 561 + L L G A+ + ++ G IA+ Sbjct: 446 -------------------SLVEALRAELAGAEERVARRLRELAELFEWLGGAIAQGPAH 486 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 L +L +L+ R L E + + E + + Q + Sbjct: 487 AVLVALEARLDYCRHLLRSSGFYEVGVGRAEGVRAFL-----EYTRDKGRVFELLQHLER 541 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 + P +++ T+ + + + +V + N Sbjct: 542 LAQEHLGDEPAP--------------------ETRERLSLMTIFRAKGLEWPLVFIPDCN 581 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 +G P + +++R LF AL + Q Y+ Y S Sbjct: 582 EGTLPYSGS----------------ENLEEERRLFYVALTRSSQHTYL-YALSS------ 618 Query: 742 RFPSVLVQE-----LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP 796 S +QE ++ + + +A ++ A F + ++ Sbjct: 619 LPLSPFLQEAEYQQVLGAVERVGEALEMKAEELSTAQTLALARGAHELGLERFLHRWWKA 678 Query: 797 GERQSYAREWLPAASQAGKAHSEFVQPLPFT 827 + Q A + L + A +A L Sbjct: 679 EQAQPIAAKVLRLFAHAERAGWLEALGLTPE 709 >UniRef50_UPI0001AEBA9E UvrD/REP helicase n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBA9E Length = 701 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 46/394 (11%), Positives = 102/394 (25%), Gaps = 86/394 (21%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 +IL L N ++ + ++R P+ IT + + E + +R+LA Sbjct: 315 PNILNLSNTLLSESDEGYKVSLFSERKSGPMPKWITV---ENDMFQAEYIVERVLA--AR 369 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 + + + V+ + R +P+ ++ + +L Sbjct: 370 EEGIDLKQQAVLFRS-----SYHSDRLELELTRRNIPFVKHGGLKFLEASHVKDMLCILR 424 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 D+ +L + I + + + + G Sbjct: 425 WADNPKHKISAFRVLKLLP-----GIGPKIAERVFNDLEKHDFALGK------------- 466 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 L +A+ + SL+ L+ Sbjct: 467 ------------LRSFALSESAKP-------------------SFLSLVDLLDNVHHN-- 493 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 P E + + +Q I + Sbjct: 494 -NIPWTEQTSAIAAFYKDLLEANYDDHFTRFGDIEQLTMISGQYS--------SRERFLT 544 Query: 640 ELA----QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 EL Q + + T+ + +K V +L + DG +P Sbjct: 545 ELTLDPPQSTGDLAGKPLLDDDFLILSTVHSAKGQEWKHVFVLNVADGNFPN-------- 596 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + GD+ +++R L A+ A+ +L + Sbjct: 597 ----EYAAGDKRALEEERRLLYVAITRAKDELSL 626 >UniRef50_Q0AXU8 ATP-dependent helicase/nuclease subunit A n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=ADDA_SYNWW Length = 1236 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 55/530 (10%), Positives = 140/530 (26%), Gaps = 88/530 (16%) Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKL 306 Y + DP+ + + + + + + G++ Sbjct: 420 YRFRLADPSLFLEKQKSYPLQDGSVNRRVDLNKNFRSHPEILNAVNYIFRHLMSEELGEI 479 Query: 307 GRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD---------ILELENRAVAGVNIEE 357 D L ++ + + ++ + + + ILE N + E Sbjct: 480 DYDEKSYLYPGLNTGQELKYQEIDKASSQEGKEKENTAKRVEICILE-NNPDLITKLEEN 538 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED---------PTLTPRDI 408 + D + + E ++ ++ +++ED + RD+ Sbjct: 539 ETEEREIPGEAENDFIERIIEMDNTEIEALLIAQKIRQLIQEDIYDPELQCMRKIEYRDM 598 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 ++++ + + +F + +P L FI+LL L D++ Sbjct: 599 VILLRATRNSAG----IFMEQLSAEGIPVYADASSGYFDTLELNLFINLLRLIDNKRQDI 654 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 +L+++ P+ + + +R + Sbjct: 655 ALLSVMRSPI----GGFSIDDFIKIRTKLI-----------------------------P 681 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 R Y+ A + +L L + +L W E Sbjct: 682 RREKQPYSFYEAMEFY--------MEDNNDDLKDRLVFFIQRLKEWELESRIMALDEFMG 733 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 + D ++ + E + + +++ Sbjct: 734 KLFMDTGYYYYAGAMPGGGQRQANLRILLHRAREFQKSSFKGLFSFIKYIEKIKSSGSDM 793 Query: 649 RIS--QRFLAGPVNICTLMPMRSIPFKVVCLLGM---------NDGVYPRQLAPLGFDLM 697 + V I ++ + + F VV L G+ N+ V + +G + Sbjct: 794 GNACIIGENDNVVRIMSIHKSKGLEFPVVILGGLGKNFNIRDSNENVLLHRKLGIGPRYI 853 Query: 698 SQKPK-------------RGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 + + + R ++ + A Q+KL + R Sbjct: 854 NTQLRTYHDTIARLAIKNRIKLENLAEEMRILYVACTRPQEKLIMVGTTR 903 >UniRef50_B7AS99 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AS99_9BACE Length = 1022 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 46/432 (10%), Positives = 117/432 (27%), Gaps = 94/432 (21%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHV--CHSPQR-EVEVLHDRLLAMLEEDPTL 403 N + + DN+ + D +I + ++P+ E ++ + +++ED + Sbjct: 301 NPGLEFAQRTDSGMMDNRTSIRLADLNIQYDEDDVNTPRECEGRLIASIIKEVIDEDTGM 360 Query: 404 T-------------PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 DI+V+ +D ++ VF + +P A Sbjct: 361 PVYDERLGTYRKAEYGDIVVLTRSLDGWAD----VFADELMNAGIPAAAQSSSGYYDTYE 416 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 +E ++LL++ D+ + A+ +D ++ Sbjct: 417 IEQVLNLLAVIDNPAQDIPLAAV-------------------------ALSYFGTLDVND 451 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 + L+ A A+ + + E+ + +LL Sbjct: 452 LA-------------------LVKSAYPDARLYESMNRYLNSHADNQDEICAKINNLLTM 492 Query: 571 LNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 + +R + + E + + + Y Sbjct: 493 IEGYRTK-SVYLTINELIWKIIYDTGFYDYVGMMPAGSMRQQNL-DMLCDKAESYARTSY 550 Query: 629 GDAVPLSLLRDELA--QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 +++ Q S V I ++ + + F +V + G+ + Sbjct: 551 HGLFNFLRYIEKIRKYNLDSQSGASDMSDNNAVQIMSIHKSKGLEFPIVIVAGI-AKKFN 609 Query: 687 RQLAPLGFDLMSQKPKRGD-----------------------RSRRDDDRYLFLEALISA 723 A + S D ++ + A+ A Sbjct: 610 NMDARGRVVVDSDIGVGADIIDTVMRTKVSTPVKSAVEMKLVDDNLAEEMRILYVAMTRA 669 Query: 724 QQKLYISYIGRS 735 ++KL ++ ++ Sbjct: 670 KEKLIMTGTLKN 681 >UniRef50_B8FB90 UvrD/REP helicase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FB90_DESAA Length = 638 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 50/535 (9%), Positives = 137/535 (25%), Gaps = 95/535 (17%) Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLF-----RDSENAGQLFNSDGEQ 293 + D D +++ + + + Sbjct: 183 YALTKSQENLMDFDDLLLHMRIMLATEPEIRDVIAKKYDYIMVDEYQDTNLIQADILRYL 242 Query: 294 DVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 G+ + G + + + + F DV P + ++ + + Sbjct: 243 GEGHQNVMVVGDDCQSIYGF--RGANFENIMRFPDVFPGTKIIRLEENYRSYQPVLDVTN 300 Query: 354 NIEEFSRSDNKRPLDPL---DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV 410 I + + + L ++ + + + D + + +D + R+I V Sbjct: 301 KIVKQATRKYSKTLFTNLQGGAAPVLVSTRDENSQSQFVVDEVKRLQSQD--VPLREIAV 358 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 + + + + + ++ + L + Sbjct: 359 LFR-----AGYQSFDLEVELTRAGIKFVKYGGFKFMESAHIKDALVHLRIAAFPTDKLSW 413 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 + L L G T + + Sbjct: 414 ---------------------------------------HRALLLLNKVGPKTAQTLSDK 434 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 + G L + + L L+ ++ R G ++ L Sbjct: 435 ICSG-----------PGLAAVKPAPSYKSGFNALRDLIKDIS--RPGQKVADVGKKVLEY 481 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV--PLSLLRDELAQRLDQE 648 R L + F + + + + + A+ + + P S + D LA Sbjct: 482 YRPYLESNFDNWPKRQKDLDQLVSMMERYGADLAKFIHDVTLEPPTSTVEDVLAVG---- 537 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 + + T+ + + ++ V ++ DG +P + A + Sbjct: 538 ----EAPPDRMVLSTIHSAKGLEWEAVFVIWTLDGRFPSRQAV-----------AKEGES 582 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSER----FPSVLVQELIDYIGQSH 759 +++ L A A+++L+ + + D + PS ++ L + + Sbjct: 583 LEEELRLMYVAATRAKKELFFVHP-TDVFDAASMTYLYRPSRFLERLPRTVLRRE 636 >UniRef50_C7HA04 ATP-dependent exoDNAse beta subunit n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA04_9FIRM Length = 1233 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 114/400 (28%), Gaps = 75/400 (18%) Query: 367 LDPLDSSITFHVCHSPQRE--VEVLHDRLLAMLEEDPTLT---------PRDIIVMVADI 415 S+ H E + R+ +++ + D +++A Sbjct: 543 PGEYTGSVEAHFLPDDTAETDAGWIARRIEELVQSGEPVRDGSATRPVQYEDCCILLAAR 602 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 + +++ A R +P R P + I+LL + D+ + A + Sbjct: 603 IDFPAYVE-----ALTARGIPVYADARENLLDAPHIRPLIALLKVIDNPAQDIYLAAAML 657 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 P+ F T++ L LR E + G + L Sbjct: 658 GPL----FGFTDDDLVRLRARAEEIQKQQGENAPQRISLY-------------------- 693 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 L +SG G + + +L R +A+ P E+ L Sbjct: 694 ----------GALLLTVNSGEDTPFTGKVRAFYARLTELR-RMARSVPAEQLLEEIFAST 742 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 A + + A G G+ A+ ++ LA Q+ + Sbjct: 743 GYLAALGVMENGARRREDARRFASFCAGAGSGGISALVRAIDAAALAGSTGQDTVPGGSR 802 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL-------MSQKPKRGD--- 705 G V + T+ + + F VV + + L + +P+ G+ Sbjct: 803 PGCVTVMTIHRSKGLQFPVVFVAD-TARRFNAADTRQPVLLHRMYGAGLRLRPEEGEGAY 861 Query: 706 -------------RSRRDDDRYLFLEALISAQQKLYISYI 732 R + L AL AQ KL ++ Sbjct: 862 KTAAYTALSNVHAAEMRSEQMRLLYVALTRAQDKLILTVP 901 >UniRef50_B8DM59 UvrD/REP helicase n=5 Tax=Bacteria RepID=B8DM59_DESVM Length = 1244 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 69/533 (12%), Positives = 148/533 (27%), Gaps = 61/533 (11%) Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGK 305 +W D A +D G +G+P + +G Sbjct: 724 EFWLDQMQNNIYASPWRHVLVDEIQDLSPLQLTLVRALAPRGG-AGFFGIGDPDQSIYGF 782 Query: 306 LGR--DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 G D L + + A + + + IL+ G ++ S Sbjct: 783 RGAHGDVAAFLREAWPDLSVVALEENYRSS------ARILDFA-----GGLMQGRSACGP 831 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE--------------------EDPTL 403 R + + + + E + +++ ++ ++ Sbjct: 832 LRAARDMPGELHLFEAPTAEGEAAWIGEQIRGLIGATSHSLLDAGHGRTRRGTVLDEGGF 891 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI-SLLSLPD 462 +P DI V+V + S P +Q +P A+ + A + + + + + Sbjct: 892 SPGDIAVLVR-VKSLIPQLQRT----LTRFGVPCAVPEAEAFWADQRVALILGAAGRMLG 946 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 S L P + + EG+ + G+ + Sbjct: 947 IGSTSSPAGPAL--PAGLSHRRLVAEGVH--PSLADRLGLDASPFPMHRGGDAADNAHGA 1002 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 T ++ + +G A L R + Sbjct: 1003 PEAAAATGSPAVSGSPDGSDGPEASGAAIDPAGGEAPLRP------DAEIPARDTPHEVD 1056 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 + L + A+ + WQ+ L Y + L + ++ Sbjct: 1057 CPPKVLARGPLGVAAYLRETPPFDDLF------WQSSAFRALSRAYDTHGGWAGLMNWIS 1110 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD-LMSQKP 701 + + E + + + V I +L + + F+ V L + DG+ P A Sbjct: 1111 LQSELELVRRG--SEKVQIMSLHAAKGLEFRAVFLPALEDGIMPFAGAGTLTGKPQRDGA 1168 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELI 752 R+ D++R L + A + L++S R E PS + ++ Sbjct: 1169 SPDTRTDMDEERRLLYVGMTRASEGLFLSCAARRQLYGRELRLKPSRFLDDVP 1221 >UniRef50_A8U8N0 Exonuclease RexA n=3 Tax=Lactobacillales RepID=A8U8N0_9LACT Length = 1267 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 42/389 (10%), Positives = 107/389 (27%), Gaps = 80/389 (20%) Query: 385 EVEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 E+ ++ ++ +++ + +DI+++ + V Sbjct: 566 ELLMVGQKIQELIQTQFPIYDKRSKTTRPIRYKDIVLLTPTKKNNL-----VLMEMFKRL 620 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P ++D + + +SLL + D+ + + A+L P++ + E L + Sbjct: 621 SIPLQVNDTQNYFQTTEITIMMSLLKVIDNPYQDIPLAAVLRSPIV----GLDENELASI 676 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R + + L Y + Sbjct: 677 R----------------------ISQKTGDYYDALKTFYQTYPGIEKASRF--------- 705 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 L G + LL +LN WR ++ + + D ++ + Sbjct: 706 ---TTNLYGKIDVLLTRLNKWRELARRDHLVALIWAIYDDTGFLDYVGGMNSGKQRKANL 762 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS--QRFLAGPVNICTLMPMRSIP 671 A + +++ ++ V + T+ + + Sbjct: 763 HALYERAASYEKTSFKGLFQFVRFIEKMQEKDKDLAEPTAISEDEDAVRVMTIHASKGLE 822 Query: 672 FKVVCLLGMNDGVYPRQLAPLGF-------------DLMSQKPKRGDRS----------R 708 F VV +L + + Q + DL + Sbjct: 823 FPVVFVLDLT-KKFNLQDIKKSYVFNEQYGVGTDYKDLERRIRYPSLPETALKVEKKTKL 881 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQ 737 ++ AL A++KL++ ++ + Sbjct: 882 LSEEMRKLYVALTRAEEKLFLVGSYKNEE 910 >UniRef50_B7J885 ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J885_ACIF2 Length = 745 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 51/439 (11%), Positives = 119/439 (27%), Gaps = 61/439 (13%) Query: 312 YLLSDLESSQELDAFVDVTPDNL-------------LHNIQSDILELENRAVAGVNIEEF 358 L+ + Q + F +P L L E+ RA V Sbjct: 292 NLMLVGDDDQSIYGFRGSSPSVLQYFADIFRPEIYRLERNYRSTREIVQRASQHVAHNRH 351 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 + SI + + + + RLL + V+ + Sbjct: 352 RIPKEPFSERETEESIFAYRHETDMDVLYWITRRLLQAHAD--GAPWSSFAVLYRSR-RF 408 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 P I A+ +P+ I + + ++ + L + S + L P+ Sbjct: 409 GPQISAL----LVRYRIPFVIYGGLSFFEYLEVKFAGAYARLATNPRDSAALRDL--APL 462 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 L + + + L + E+ + Sbjct: 463 LP---GVGDRYMDLLHAALMEN-------------------PTFGFVQAAEACASNRFRT 500 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQ--LNIWRRGLAQERPLEEWLPVCRDMLN 596 + Q + E G + ++ + ++ + + Sbjct: 501 AHQSILKVQKTLRHLLQSNPETWGKTCWEYENSGIRVYLEKADAKEYADDKSALIASL-- 558 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 + + +Q +I E + V L +A + + Sbjct: 559 ------KRRQDNLGFFDQMITDVIHEADAEEAKHPVLL------IAGMFVTDAQKKDEDG 606 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL-GFDLMSQKPKRGDRSRRDDDRYL 715 V + T+ + + F V + G + P + + ++ ++R+++R + Sbjct: 607 DRVVLATVHACKGLEFDEVHIPGFVQPLMPWPIDDDRDITTLPPDDQQRIYAQREEERRI 666 Query: 716 FLEALISAQQKLYISYIGR 734 AL A+ +L++ GR Sbjct: 667 SYVALTRAKHRLFLHVPGR 685 >UniRef50_C6QAP5 Double-strand break repair protein AddB n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QAP5_9RHIZ Length = 1038 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 94/735 (12%), Positives = 204/735 (27%), Gaps = 89/735 (12%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 + + ++ + +K L+ + I+ S Q E E + L +E Sbjct: 323 RPSSSTDQWHRYATTADKGELEKALAGISLIEAPSAQDEAETVALILREAIETPGQTA-- 380 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 ++ D + + S R ++ S F Sbjct: 381 --ALVSPDR-----LLARRVAIRLEAWGIRVDDSAGRPFAKTVPGAFLALVIGAMVSEFA 433 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 + +ALL P+ +F+ + +R++ I + L Sbjct: 434 PAETMALLRHPLCRLKFNAFD-----IRKYARALEISAFR--TSYLGHGLDGIRAALETA 486 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL----NIWRRGLAQER 582 R +A+ W D + L+A L L + A+ Sbjct: 487 ERDRAEKKRMHPAARRLWS--EDCDGARELVARLAAAFQPLADLYAANGDQTLAEFARAH 544 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 +A A + + A A+ + D A Sbjct: 545 AEAAEALAQLPDDDAAAEASANPLWQGESGDTASRFFAKLLDDATPAVAISAADYADLYA 604 Query: 643 QRLDQERISQRFLAG-PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 L +E + +R ++I R V+ L +N+G +P P + + Sbjct: 605 TLLARENVRERTAVHPRISIWGPFEARLQQPDVLVLGSLNEGTWPEAAEPGAWLNRPMRR 664 Query: 702 KRGDRSRRDDDRYLF--LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 G S ++ +L+ A+ +Y++ + D PS + + + Sbjct: 665 DLGLPSPEEEIGRAAHDFTSLLGAK-TIYLTRAEK--VDGVPTVPSRWLMRMRALLKGMK 721 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 A + AR + + Sbjct: 722 LESVLVADKPWLAWARARDRIVGKR-----------------------------IAIKPP 752 Query: 820 FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 +P P + + ++R+ A+P + + L++ PD L G + Sbjct: 753 EPRPALALRPRRMSVTDIERWIANPYATYARHILKLEPLPPLGASPDA---SLRGALVHD 809 Query: 880 INQQLLNALVEQDDAERLFRRFRAAGDLPY-----GAFGEIFWETQCQEMQQLADRVIAC 934 + + NA ++ + L + A D+ + + + A+ Sbjct: 810 VLSRFANAFPDRLPDDPLAELEKIAADVLQTYTGNARIAAFWMPRLKRFLSWFAEGEEKR 869 Query: 935 RQPGQSMEIDLAC--------NGVQITGWLPQVQPDG----LLRWRPSLLS----VAQGM 978 R+ +S+ +++ + +T ++ G + ++ + V G Sbjct: 870 REGVRSVIAEISGALVLAPTPDPFTLTARADRIDDTGSAVIITDYKTGAIPKQEWVENGR 929 Query: 979 QLWLEHLVYCASGGNGESRLFLRKDGEWRF------PPLAAEQALHY--LSQLIEGYREG 1030 L A G G L R R+ P E+A+ + L R+G Sbjct: 930 SPQLPLEAAIALGETGFPNLAGRTVEALRYIRASGGEPAGEERAIKSNDIGTLAAQARQG 989 Query: 1031 MSAPLLVLPESGGAW 1045 + + + + Sbjct: 990 LERLIAEFDDPATPY 1004 >UniRef50_C0W128 ATP-dependent DNA helicase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W128_9ACTO Length = 1088 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 85/689 (12%), Positives = 190/689 (27%), Gaps = 93/689 (13%) Query: 379 CHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 S +EV + +L + +D+ V+V F A +P + Sbjct: 364 YASAYQEVTGIIRQL-NYQHLHEKVEYQDMAVIVR-----RSHEVEHFRQALVRNGIPTS 417 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 ++ R H + A + LL +E+V + + ++ ++ L L Q V Sbjct: 418 VNSRAITYLHKPITAMLLLL------LSAENVAVKVLTDEFGQQLEV-QQELLILEQLVR 470 Query: 499 ESGIRWGIDDDNV---RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 ++ +L + W L A + E + + + Sbjct: 471 SPLVKIDPLKLRRVTDLVGQLSERELNLWELFTKVQELDRATDKTSDEAERAIRKTLKTT 530 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEW-LPVCRDMLNAFFLPDAETEAAMTLIEQ 614 V + L +++ R + W L + ++F + + Sbjct: 531 ENQATVQVMLQCLSLIHLGRELQEASPNVGVWKLWQATGLEDSFVKLALAGTSESVSADD 590 Query: 615 QWQAIIAEGLGAQ-----YGDAVPLSLLRDELAQRLDQERISQRF-LAGPVNICTLMPMR 668 + A+I+ A + + L + +AQ + + ++ + + T+M Sbjct: 591 RLDAVISLCRTADVWQQRHPEGTALDFANELVAQTIPSDNLATIAQRPAGIEVLTVMQAA 650 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGF-----------------DLMSQKPKRGDRSRRDD 711 + VV + G+ V+P +Q K+ R D Sbjct: 651 GRQWPVVFVAGVQSDVWPNLAIRNRLTKASQISLKVHHPELKGLPQTQIFKQLKLQSRVD 710 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ----ELI--DYIGQSHYLPGDE 765 + F+ A+ + +KL+IS + SV E + + + + + Sbjct: 711 ELRTFVAAVSRSSEKLFIS-----AVSGEDTAQSVFFDLAAEEFLSAESVSDNFDVLQQI 765 Query: 766 ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 + A ++ + L D Q + AR + PL Sbjct: 766 VELRELPVAEMRPLVAKLRRLSAQDTQLLEAEINPELARVAEQILASLALQGVRIADPLN 825 Query: 826 FTLPE---------------TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 +T + ++ P + F Sbjct: 826 WTGTRLEEISHAPVFPGDKPVLSPSAIESLLNCPAQWFLSRHGGSRK------------- 872 Query: 871 ILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGD---LPYGAFGEIFWETQCQEMQQL 927 + + D + L D G + +++ +L Sbjct: 873 STGAAGLGTLIHTIAEKYPHGDAEQMLADLEIFWDDGEYNRETELGRRAYTDAREKIVKL 932 Query: 928 ADRVIACRQPGQSME--IDLACNGVQITGWLPQV-QPDGLLRWRPSLL--------SVAQ 976 A +E I + I G + ++ DG +R + Sbjct: 933 AQCFADFGNGEVEVEKRISVDVGIATIMGVIDRLEHIDGAVRVTDIKTGYVPSVKETQKH 992 Query: 977 GMQLWLEHLVYCASGGNGESRLFLRKDGE 1005 + ++ + A +RL ++ + Sbjct: 993 KQLAFYQYALMKAGYEVMGARLLGLREKD 1021 >UniRef50_A8PMU2 Putative uncharacterized protein n=1 Tax=Rickettsiella grylli RepID=A8PMU2_9COXI Length = 889 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 101/869 (11%), Positives = 222/869 (25%), Gaps = 156/869 (17%) Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 L+ L L ++ H++ + ++ DI + A A+ + + D P F+ Sbjct: 72 LRLLNKLQEYSAWHIVIQS-SHSFFLDIANTAENARKAWHLIQQTQLDYLSPFFKQCNET 130 Query: 284 GQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL 343 + A D L+ L L+ + + Sbjct: 131 EAWQTWAKQFVHYCESHAYI-----DLSSALNHLMCLFHKKILKPPQRIFLIGFNEINPQ 185 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 V P + E + + ++ Sbjct: 186 YKNLLRVLNDQGCSIHHYAPTYPKTKQYR----ISLPDKETEYQTMALWAYQSFQQSK-- 239 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPAD---RYL---PYAISDRRARQSHPVLEAFISL 457 ++I ++ + + +F + + P+ I+ +++ + + Sbjct: 240 --KNIGCLIPHLVERRTHLLTIFTDIFTECAPHSIDPPPFNIAAGNPLLEFGLIQTALLI 297 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L L + +LL P + G + L Sbjct: 298 LDLKAIN-TFSSLHSLLRSPYI------------------------GGFQREQSPRASLD 332 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 R R+ L + ++ + +L L +LL + + Sbjct: 333 IF----LRGAENRLSLNQLITISEEQTCFILS------------RSLKTLLGLIKKYTCH 376 Query: 578 LAQERPLEEWLPVCRDMLNAFFLP-DAETEAAMTLIEQQWQAIIAEGLGAQY-GDAVPLS 635 + W L+AF P D + W ++ G + + Sbjct: 377 FLAKPSF--WSAYFVKKLHAFSWPGDRPFIREEYQLLDCWSELLTAFAGLDFILGEISHD 434 Query: 636 LLRDELAQRLDQERISQRFLAG--PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L + + L P+ + L+ + F + ++G +D +P P Sbjct: 435 TALRHLRCHIANTLFQMKTLHDDPPIQVLGLLDAAGMYFDELWVMGFDDKTWPAPAKPNP 494 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEA----LISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 F + + + S + Y F L + +KL S + + + PSV +Q Sbjct: 495 FIPYALQRGQPIPSSSSEREYYFAAMLTKNLTAHAKKLIFSTAKQHL--DETLRPSVFIQ 552 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 L + + + L + + + N+ G + Sbjct: 553 SLPEI--KLNDLHLPPYSTMAKKIMESQEWEYYSDECIALTEDNFISGTQL--------- 601 Query: 810 ASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN-----FRTEDSEI 864 LQ A P +AF + RL+ + + Sbjct: 602 ---------------------------LQSQAACPFQAFARWRLKARTHPFFPQNNGLDA 634 Query: 865 PDTEPFILEGLSRY-----------QINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFG 913 + L ++ + Q LN + L + + F Sbjct: 635 RERGILFHRVLEQFWNKIKNQETLLSLTQHALNQHIHDAINTCLKIWSKKRPIIFKTYFA 694 Query: 914 EIFWETQCQEMQQLADRVIAC---RQPGQSMEIDLACNGVQITGWLPQVQPDGLLRW--- 967 + + + L D + + L ++ + ++ Sbjct: 695 TLERQRLSSLLSTLIDLEKQRPHFSETQHEKKQHLKLGPFILSLRIDRIDKLDGNDAMII 754 Query: 968 -----RPSLLSVAQGMQLWLEHLVYCASGGNGES------------RLFLRKDGEWRFPP 1010 RP + + + +YC S L + E P Sbjct: 755 DYKTSRPQKIDWLDERCDYPQLPLYCLSDPKTVRSFSVWYCHRNRITLKGLSEEETSLKP 814 Query: 1011 LAA------EQALHYLSQLIEGYREGMSA 1033 L ALH+ S L++ ++ + Sbjct: 815 LTPLKKLKTSHALHHWSDLLKHWQLSLEK 843 >UniRef50_UPI0001C37CA2 recombination helicase AddA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37CA2 Length = 1213 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 50/385 (12%), Positives = 105/385 (27%), Gaps = 84/385 (21%) Query: 381 SPQREVEVLHDRLLAMLEED----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 + +E + ML + P D ++V + + + + Sbjct: 546 NINKEAVFTAQTIAEMLHKGTEVVGNDGSTRPCRPSDFCILVRNNVHINKYAEQ-----L 600 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 + +P S+ + I LL + + + + A++ P+ + L Sbjct: 601 SLLGVPAKGSEESGYLRSREIAVLIDLLRVVSNPLLDIPMAAVMTSPMYM----FSIREL 656 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 Y+R L +L G A + + L Sbjct: 657 AYIRSLEKGRP--------------------------LYSVLRGLADGEYEECFDMFL-- 688 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF--FLPDAETEAA 608 L L+ +R + + E + D + ++ E Sbjct: 689 ----------RERCRDFLDSLDSFRMD-SVTMTIGELISSIYDTTDFISVMQLYSDGEKK 737 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR----FLAGPVNICTL 664 + Q + A + + L L + ++ +Q V++ TL Sbjct: 738 RANLRALIQYAQSYEESAAFEGSGGLGGFLRHLDKVMENGDYAQGKVAASSGDYVSVLTL 797 Query: 665 MPMRSIPFKVVCLLGM-------NDGVYPRQLAPLGFDLMSQK-------------PKRG 704 + + F V + +D V G+ L K Sbjct: 798 HRSKGLEFPFVFIAETSTKFQYDSDIVMCSSDGRAGYILYDPKIYRKYRTFQQSILASEE 857 Query: 705 DRSRRDDDRYLFLEALISAQQKLYI 729 +R R ++ L L A+QKL++ Sbjct: 858 ERDTRSEEMRLLYVGLTRAKQKLFV 882 >UniRef50_A7HKE8 Putative uncharacterized protein n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HKE8_FERNB Length = 1077 Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 65/607 (10%), Positives = 178/607 (29%), Gaps = 87/607 (14%) Query: 312 YLLSDLESSQELDAFVDVTP--DNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 L++L E F D+ I +I + + + ++ Sbjct: 228 QALAELVKKSENTIFFVWQKVNDSAFSQI-DEIYDFLEKNSFEFDDSFCNKKVVNLEELI 286 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + SI + E + ++ +++ + P ++ ++V + I Sbjct: 287 KNKSIGEVDVENQYNEYHYIVKQVKSLII--EGVNPEEVGIVVPN-----TNIAYRLMDE 339 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + +PY S + +++ + L + + ED+LA+++ P++ + ++T + Sbjct: 340 FDEAGIPYRYSGKNPLTESHIIKILLQPLLTIEEGYRPEDLLAVIESPLV-EKRELTMDE 398 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + L + IR E+ + + L R + + + + + + Sbjct: 399 IEDLFKEYEYYSIRM-----KPSEMRNKEDRRKNFFEKLERDIAELESKKEEYDIEEDVY 453 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 L E + ++ +L + + +++ ++ + + L + Sbjct: 454 LSSVERL--EKLKKFKEIMEELFGLLDNIHENWGSKDFFEWYKEFIKSSILKFGDILENY 511 Query: 610 T-----------------------LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 + + + + + ++ S L L+ Sbjct: 512 EIMSSQKSVIRSVGKEINALSKFINVLNKLEIYVQKLRESKLSKVTSWSKLFKLFVVLLN 571 Query: 647 QERISQRF-LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 + F A V+I + + + K + D YP + + Sbjct: 572 SNGYRETFKSANVVDIIDIPTSKFVKKKYKFFVDFIDDYYPSIGKINPLLYRTTNQRSRI 631 Query: 706 RSRRDDDRY--LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 ++ +FL + S L +S PS + EL Sbjct: 632 YDLLEESERSSVFLSIIFSQNSYLIF---PKSTNTGDPLVPSKYLSELAH---------- 678 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 ++A ++ D Y+ + S E G+++ Sbjct: 679 ----------NHIEAKISSDDIFKKIDYDIYKLAQSASQIIEVKREDFVVGESNIT---- 724 Query: 824 LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 + + + P+ ++ + +T+++ + L I + Sbjct: 725 -------EFSHSRIATYLSCPMLFYYSNIATLPEKTKENNL---------ALMEGIITHR 768 Query: 884 LLNALVE 890 +L L + Sbjct: 769 VLAKLFD 775 >UniRef50_A7HPC8 Double-strand break repair helicase AddA n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HPC8_PARL1 Length = 1156 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 87/696 (12%), Positives = 164/696 (23%), Gaps = 144/696 (20%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQRE-VEVLHDRLLAML------- 397 V I E D + P D+ + + +P + + + L Sbjct: 522 RELDAGLVEIWELEEPDEGQEASPWDAPLDYMTEAAPMAKLAARIAATIRNWLDSKEVLI 581 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 + + DI+++V +++ + + +P A +DR + ++L Sbjct: 582 SKGRPIRAGDILILVRRRNAFVGEM----VRHLKELGVPVAGADRMVLTEQLAVMDLLAL 637 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 + +L P TEE + L W + L+ Sbjct: 638 ARFVLLPEDDLTLATVLKSPF----AGFTEEEVFDLA---------WNRKGTLWQSLKEK 684 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 AT + +L + ++ G L+ L Sbjct: 685 ATRNPRYAEAAAFLLRLLERADYEPPYEFFAHVLGGEGGRTRLLARLGP----------- 733 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 ++ L + L Sbjct: 734 ---------------------------------EAADPIDEFLSLALEFERKHPPALEAF 760 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG----------VYPR 687 L + + + V + T+ + + ++V + P Sbjct: 761 VHWLERGSSEIKRDMDQGRDEVRVMTVHGAKGLEAEIVFMPDTCAAPGGSHDPALLSLPA 820 Query: 688 QLAPLGFDLMSQKPKRGDRS------------RRDDDRYLFLEALISAQQKLYISYIGRS 735 L+ K+ + + + R L AL A+ +LYIS Sbjct: 821 LEQDGPKLLLWPVRKKDEDEVSAGARALHREIQAAEYRRLLYVALTRARDRLYISGYRN- 879 Query: 736 IQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ 795 PS + + A R D + Sbjct: 880 -----ATPPSS------ECWYEMVCETLKPAAREIVLPDGRMVWRIEGEQRRQVDSKAPS 928 Query: 796 PGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQV 855 E S EW + PL T + L Sbjct: 929 AAEEPSAPPEW-----------AHRDAPLEPTPSRPLAPSRL------------------ 959 Query: 856 NFRTEDSEIPDTEPFILEGL---SRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAF 912 + E P + R + +LL +L + + AER R +G Sbjct: 960 -PPEDLEEPSVLSPLAGDNTNRFRRGSLIHRLLESLPDMEPAERRAAARRFLAQPAHGID 1018 Query: 913 GEIFWETQCQEMQQLADRVIACRQP-------GQSMEIDLACNGVQITGWLPQVQPDGLL 965 E + + L D IA + I+L + I G + ++ Sbjct: 1019 EAAQNEIEAAVFRVLDDATIAHVFGKGSRAEVPVAGTIELGGRPLLIAGQIDRLCVTED- 1077 Query: 966 RWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLR 1001 + LE +V G R L Sbjct: 1078 SVTIIDYKTNRPPPQTLEAVVPAYIGQMAAYRALLA 1113 >UniRef50_Q4L4Y3 ATP-dependent helicase/nuclease subunit A n=65 Tax=cellular organisms RepID=ADDA_STAHJ Length = 1225 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 57/492 (11%), Positives = 137/492 (27%), Gaps = 97/492 (19%) Query: 383 QREVEVLHDRLLAMLE-------EDPTLT---PRDIIVMVADIDSYSPFIQAVFGSAPAD 432 ++E + +++ ++E + T +DI+++ + + + +Q VF Sbjct: 541 EQEARYIAEQVKYIIEHKQVYDMKSETYRQATFKDIVILERGLKN-ARNLQQVFKDY--- 596 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +P+ ++ + + +S L D+ ++ L+ + TE+ L Sbjct: 597 -NIPFHVNSKEGYFEQTEVRLVLSFLRTVDNPLQDIYLVGLMRS----VIYQFTEDELAN 651 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 +R + +QS+L Y + Sbjct: 652 IR----------------------------------------VQSMNDDYFYQSILHYMK 671 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETEAAMT 610 LV L + +N+++ +Q P+ + + + + +F + Sbjct: 672 DQEANPLLVEKLEHFMDDINMYQE-YSQSHPVYQLIDKFYNDHYVIQYFSGLIGGKGRRA 730 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMR 668 + + + + + DEL +R E V + T+ + Sbjct: 731 NLYGLFNKAVE-FENSSFRGLYQFIRFIDELIERNKDFGEENVIGPNDNVVRMMTVHSSK 789 Query: 669 SIPFKVVCLL----GMNDGVY--PRQLAPL---GFDLMSQKP-------------KRGDR 706 + F V N G P L G D + ++ Sbjct: 790 GLEFPYVIYSELSKNFNKGDLRKPLILNQKYGLGIDYFDLEQNVTYPSLSSVVIKSITEK 849 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA 766 ++ L AL A+++L + D E E ++ + S Sbjct: 850 ELISEEMRLMYVALTRAKEQLIL----IGTIDKEEAL------EKLERLPISGNQIALHK 899 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 + + + + P+ + P E Sbjct: 900 RLSADRPFDLIYSILAKYQSTSLLPEYRFEKSIDNLDESLRPTVDIKIAQFEELSIEDSE 959 Query: 827 TLPETVPLETLQ 838 + E+ + L+ Sbjct: 960 SEQESRNISDLE 971 >UniRef50_B1C9D6 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9D6_9FIRM Length = 1171 Score = 125 bits (314), Expect = 9e-27, Method: Composition-based stats. Identities = 47/513 (9%), Positives = 135/513 (26%), Gaps = 108/513 (21%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSI-----TFHVCHSPQREVEVLHDRLLAM 396 I EN + EE ++ + + + + E+ + + + Sbjct: 476 INYDENERLIAGRDEEIESKIEVHLINKDTAGVDSFDSELSELSTEENEITYIALMINNL 535 Query: 397 ---------LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 L+E + DI ++ ++ ++ +F +P Sbjct: 536 IGTDIYDPELKEYRKVKFSDICILHRSANTRIKNVKEIFNKY----SIPVTSEKEIEYFK 591 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID 507 +E LS+ ++ +L+++ P+ Sbjct: 592 TLEIETIKDFLSIINNFKDDITLLSVMRSPI----------------------------- 622 Query: 508 DDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567 + F + +L ++S++ + + L + ++ Sbjct: 623 ----------------FNFTVDELLEIKISTRESHYYKSIMSFINKENVNITLKDKVKNM 666 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDM--LNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 L +N + + + + + + + + + ++ E Sbjct: 667 LKVINDYSDR-SLYTSVPDLISNIYEETNIMDYMSALPFGNIRVNNMKTLLIK-ANEYES 724 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN---- 681 D + + VN ++ + + F +V L+G + Sbjct: 725 FSNEGLYGFINFMDYAKIQSESGYAFSEDSENSVNFMSIHKSKGLEFPIVILMGCHKMFN 784 Query: 682 --DGVYPRQLAPLG------FDLMSQKP----------KRGDRSRRDDDRYLFLEALISA 723 D P L DL ++ + ++ L AL A Sbjct: 785 MLDTKKPIMLNKDLGICPSLIDLDNKYKVDSIFKICAKIVENNEILSEEMRLLYVALTRA 844 Query: 724 QQKLYISYIGRSIQDNSERFPS-----------VLVQELIDYIGQSHYLPGDEALNCDES 772 ++KL ++ + + + PS ++ ++ I + + + +++ Sbjct: 845 KEKLILTAYSKDTKKLIDNLPSNITPYSVEFSNSYLEWIMQGILPNKIYEEENNIIYEDN 904 Query: 773 --------EARVKAHLTCLHTRMPFDPQNYQPG 797 + L+ + D Sbjct: 905 NFIVYNNKIEDLLTELSTSYINQKDDDFYLDDK 937 >UniRef50_B3WEJ1 ATP-dependent helicase/nuclease subunit A n=8 Tax=Lactobacillus RepID=ADDA_LACCB Length = 1234 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 65/610 (10%), Positives = 153/610 (25%), Gaps = 108/610 (17%) Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 +E + RDI ++ S IQ F +A +P ++D + L Sbjct: 577 RQAQEYRRIHYRDITLLTRQTSQNS-LIQTQFAAA----GVPLFVADTKNFFKTTELMVM 631 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 ++LL + D++ ++A+L P++ ++ + L +R + Sbjct: 632 LALLKVIDNQKQDIPLVAVLRSPIV----GLSADQLALIRLAAKQVPYY----------- 676 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 + L + + L L QL+ + Sbjct: 677 ---------------------------DAVTAFLQAEPKTPLAQRTHDMLTHFFNQLSHF 709 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 R + + + +D ++ + Q + Sbjct: 710 RDLARENDLVTLLWAIYQDTGFLDYVGGTPGGSQRQANLQALIDRARTYEAGGFKGLFAF 769 Query: 635 SLLRDELAQRLDQERISQR--FLAGPVNICTLMPMRSIPFKVVCLLGMNDG--------- 683 + ++ + + V + T+ + + F VV L+ N Sbjct: 770 IHFITLMQKQDQDLAMPAQVDPDNDAVKLMTIHKSKGLEFPVVFLMQANKHFNMRDQTGT 829 Query: 684 ----------VYPRQLAPLGFDLMSQKPKRGDRSR--RDDDRYLFLEALISAQQKLYISY 731 + + ++L + + R ++ L AL AQQ+LY+ Sbjct: 830 AILTKQGIGIKWLDPETRVEYELPQYQAAKAARQNQTLAEEMRLLYVALTRAQQRLYVVG 889 Query: 732 IGRSIQ----------------DNSERFPSV--------LVQELIDYIGQSHYLPGDEAL 767 S + R + + + + + G Sbjct: 890 ATMSGNQLTSADKTVEKWAAAAEGEARVLAPQVRSGATSYLDWIGPALIRHPQARGLAET 949 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT 827 + + T P P + + + ++ KA+ Sbjct: 950 TIKPALVGDETEFTIEIDVNPQVTPTATPEKVSDDSGTMVDLSAWFKKAYPFQAATTTTG 1009 Query: 828 LPETVPLETLQRFWAHPVRAFF---QMRLQVNFRTEDSEIPD---TEPFILEGLSRYQIN 881 + ++R + P L D P P + + Sbjct: 1010 FQ---SVSEIKRAFDDPDTIDLVNADRFLGPKPPMRDLTAPAFLTETPSGISPAAIGTAT 1066 Query: 882 QQLLNAL-----VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ 936 LL + + L + + I + + R++ + Sbjct: 1067 HLLLQLVDLAKPITMASLRALRDQLTTKQVIAVDVAKHIDLTALIRFFETDLGRLLLAKP 1126 Query: 937 PGQSMEIDLA 946 E+ + Sbjct: 1127 QQVHREVPFS 1136 >UniRef50_C0BDK3 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BDK3_9FIRM Length = 1214 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 42/391 (10%), Positives = 104/391 (26%), Gaps = 98/391 (25%) Query: 385 EVEVLHDRLLAMLEED----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 EV ++ R+ ++E + +DI+++ ++ + + Sbjct: 542 EVRLIAQRIGELMENQQIVDKETGMLRPIRYQDIVILTRSPAGWTDTVTRILQDE----G 597 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P + + L + D+ ++A+L P +T E L +R Sbjct: 598 IPVLAESADGYFETLEIGWMMDYLRVLDNFRQDIPLVAVLKSPFGR----MTNEELAQIR 653 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + + + +Q+VL + Sbjct: 654 E-----------------------------------------LNAEVPFYQNVLETADPE 672 Query: 555 G---LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAM 609 L A ++ + + L +R + + + L + + + Sbjct: 673 KKTDLPAGILKKVRDVFGWLFYFRERIPYTA-IHDLLWEIMKKTGYRDYIAAMPGGKGRR 731 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL------AGPVNICT 663 +I + L + Q L + + V + + Sbjct: 732 AN----LDMLITRAKAFEATSYKGLYHFVRYIDQ-LKKYNVDFGEAGLYDEQTDAVRLMS 786 Query: 664 LMPMRSIPFKVVCLLGM---------NDGVYPRQLAPLGFDLMSQKPKRGDR-------- 706 + + + F VV + GM V G D + + + Sbjct: 787 IHKSKGLEFPVVIVTGMGKRFNIQDTTASVVIHPDLGFGIDAIDLERRTKSPTLLKKVIQ 846 Query: 707 -----SRRDDDRYLFLEALISAQQKLYISYI 732 ++ + AL A++KL ++ Sbjct: 847 NEIGLENLGEELRVLYVALTRAKEKLILTGT 877 >UniRef50_C1D2V9 Putative ATP-dependent nuclease, subunit B (AddB); putative UvrD-like DNA helicase C-terminal domain protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1D2V9_DEIDV Length = 897 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 96/717 (13%), Positives = 174/717 (24%), Gaps = 136/717 (18%) Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 + EV ++ + L D + + V+V +Y A + +P Sbjct: 254 EFPDIESEVRSCLRQVRSWL--DDGVRADHLAVIVRHEATYL----AALADVAREYAVPL 307 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 + P+ L+ W+ Sbjct: 308 VSGGQLPLLHTPLG---------------------------------------SLLQAWI 328 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 + W R L P R L S G W + L + + Sbjct: 329 DAHAREWRYSAT-RRVLTHPLLRLSVDALARARALQPGC-PSGLGVWNADLDWLDVPEDT 386 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 L L L + D A++L+ + Sbjct: 387 -----TWLEGLGVLQRLLVDLGVRDQCQH---------------DPALNVAVSLLGDRLS 426 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 A A+ DA L + L + G V + + F V + Sbjct: 427 A------EARRTDACSREQLLGLVRHVLQTTTMPVLLGRGGVRVANPLAALGRRFDHVWV 480 Query: 678 LGMNDGVYPRQLAPLGFDLMSQKPK--------RGDRSRRDDDRYLFLEALISAQQKLYI 729 LG++D ++P + A + + + + + LFL A+ A +L I Sbjct: 481 LGVSDTLFPARSADHPLIDSATRRRWSRSGVHVPDVSALASVEEALFLGAVAGAGHELVI 540 Query: 730 SYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 S R D E PS L + G + ++ LT Sbjct: 541 SRPRRGP-DGRELRPSPFWSRLGE---------GKAEAAPLALGSEMERLLTLALAGQTL 590 Query: 790 DPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 PG Q + + HS + L A R F Sbjct: 591 ------PGSIQGKVQVERERDAGHFGPHSGQLDSPIRVEERRWSPSQLHAAGACRYRWFT 644 Query: 850 QMRLQVNFRTEDSEIPDT--------EPFILEGLSRYQINQQLLNALVEQDDAERLFRRF 901 Q L+++ + + D R + ++ +R R+ Sbjct: 645 QKLLRLDEPLDPDLVEDRRVTGTLLHAALEAALQDRAAGDTTEDRVRRAEEALKRKERQL 704 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQLAD--------RVIACRQPGQSMEIDLACNGVQIT 953 A+G+L G + E + + V + + + + Sbjct: 705 WASGELRGGPLWPVDREEIRRTAVRAVRSPAFVPPGWVPVHLEERREFTVRAGDATFALV 764 Query: 954 GWLPQVQPDGLL----RWRPSLLSVAQGMQLWLEH-----LVYCASGGNGESRLFLRKDG 1004 G + ++ ++ + + L A G G L + Sbjct: 765 GIVDRLDQTPDGLTVTDYKTGSYVSKVVFEGVMNLEVQLPLYMEALGAAGGRYLSIENAE 824 Query: 1005 EWRFPPLAAEQ--------ALHY------LSQLIEGYREGMSAPLLVLPESGGAWLK 1047 A + A H L L +G AP A+ Sbjct: 825 NLPEAAGPAAESPRKSYRWAQHQAKVSLFLENLATALAQGNVAPSPDHKREACAYCA 881 >UniRef50_A0JYL6 UvrD/REP helicase n=3 Tax=cellular organisms RepID=A0JYL6_ARTS2 Length = 1150 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 95/708 (13%), Positives = 181/708 (25%), Gaps = 119/708 (16%) Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 + + E + + P + H+ SP +E+ + R+L D DI Sbjct: 393 SARRLESAEPPSNRPESGAVPACGGVEGHILPSPVQELRYVAQRILDAHLNDR-RELGDI 451 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSR--F 465 V+V + A +P + A + + + ++ Sbjct: 452 AVIVRNGGQL-----NQLQRHLAGHGIPVRVPVAESAVRDEVAVRPLLDAYAVALDPAVL 506 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 E +ALL I LR+ + L Sbjct: 507 TPEAAVALLTS-------RIGGATSIELRRLRQSLRREEILGGGGRTSDALLVESLLEPG 559 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 T + G + ++ + G AE V Sbjct: 560 ALATTGIEGRSARRVARMIEAGREAARAPGANAETV------------LWALWNSTGLAA 607 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 W D A A + + + + L+Q L Sbjct: 608 RW----TDAALAGGAAGARADRDLDAMMALFHTAERYVDQLPGSGPDQFLEYL--LSQEL 661 Query: 646 DQERISQRF-LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD---LMSQKP 701 + ++ R L V + T + VV + G+ +GV+P L + Sbjct: 662 PMDTLAARAQLEDAVELMTPASAAGREWPVVIIAGLQEGVWPNTRLRGELLGSTLFADAV 721 Query: 702 KRG------------DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 + G R R D+ F A+ A++ L + + + PS + Sbjct: 722 EHGVDHALQLGPISRLREIRYDELRSFSTAVSRARELLICTAVSS-----EDEQPSSFL- 775 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 DY+ H E ++A + L D + + L A Sbjct: 776 ---DYVAPLHPGQDRRTFTPVERPMTLRALVAELRQHAQLDGRFAAESVEAARVLARLAA 832 Query: 810 ASQ-AGKAHSEFVQPLPFTLPET----------VPLETLQRFWAHPVRAFFQMRLQVNFR 858 A AH + L E V ++ P+ F Q Sbjct: 833 AEPSVPGAHPDSWWGLAALSSEERIVPPGGTVFVSPSKVESVQKSPLDWFIQAVGG---- 888 Query: 859 TEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDL--PYGAFGEIF 916 D S + + L + +E L R L G++ Sbjct: 889 ---EAATDF------ARSLGTLVHAIAQDLPDASGSEYLVELVRRWPALGMKDNWEGKLD 939 Query: 917 WETQCQEMQQLADRVIACRQPGQ-----SMEIDLACNGV--------------------- 950 ++ +++LA V+ R G+ + ++ + Sbjct: 940 FQRAEGMVRKLAQYVLVMRSEGRSLVGVERDFEVKLPDIVDIPQPETLVPAATDAEPEVR 999 Query: 951 --QITGWLPQVQPDGLLRWRPSLLSVAQGMQL------WLEHLVYCAS 990 + G + +++ D R L + + Y A+ Sbjct: 1000 SAVLRGQVDRLEIDAEGRLVIVDLKTGKRQPSKADLARHPQLGAYQAA 1047 >UniRef50_C6J3M4 UvrD/REP helicase n=2 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3M4_9BACL Length = 732 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 73/554 (13%), Positives = 151/554 (27%), Gaps = 104/554 (18%) Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLL 314 + +D E Q + + L SW G D YLL Sbjct: 233 RRYQRRYDYVLTDESQDTSRVQHAIIEKLVQQHRNLCVVADDDQSLYSW--RGADPAYLL 290 Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLD-- 371 + F V P+ L+ ++ + VA I+ K+ Sbjct: 291 N----------FKQVYPEALILFMEQNYRSTPEIVNVANTLIQRNQDRYPKKMFTENPPH 340 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 I +V+ L + + + ++ ++ + S + + Sbjct: 341 KPIEIRHLDDYSDQVKYLVNEIQQIKN------FAEVAILYRNNSSSIALM-----NEFD 389 Query: 432 DRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 +P+ + SH V+E ++ + + T++ Sbjct: 390 RAGIPFYMKDADNRFFSHWVVEDILNFMRMT-----------------------FTDKRP 426 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM-LLGYAMESAQGEWQSVLP 549 L + I + + L + + L R+ L Y ++ Q ++ Sbjct: 427 DILEKI--HLKFNGYISKEQMAALLKIRNEESVFDNLLNRVPLKDYQVKQLQMCKETFQE 484 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 L A + + R L E+ LE+ + Sbjct: 485 MKGMPPLHA------------IRVIRDRLGYEKALEKICEWKGFRMEYLLG--------- 523 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 I + I AE + + L L R + V T+ + Sbjct: 524 --ILNTLEEIAAELATME-----EFAARLKYLESILRTARTKRG--QNAVTFSTMHSSKG 574 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL-Y 728 + F+ V ++ + +G+ P + D+M ++ LF + A++ L Sbjct: 575 LEFERVYMIDLVEGIIPSKADKENTDMM------------EEATRLFYVGMTRAKKHLEL 622 Query: 729 ISYIGRSIQDNSERFPSVLVQ-----ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 ++Y +D +E S V +L G+ + L L Sbjct: 623 LTY---KKRDGAEVTESRFVAYVRYIQLPPQAGEPSSATSPSIPVPAQDNPNAIRRLAEL 679 Query: 784 HTRMPFDPQNYQPG 797 + + G Sbjct: 680 REGESIVHRAFGKG 693 >UniRef50_B2IQB2 DNA-dependent ATPase I and helicase II n=4 Tax=Bacilli RepID=B2IQB2_STRPS Length = 1334 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 101/803 (12%), Positives = 235/803 (29%), Gaps = 201/803 (25%) Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV---GNPLLA 301 Y DI + Y + R + + D QD N L+ Sbjct: 236 EKYSSDISNHNYFDFDDMILWTIEKLEENEGFQRSVSDTIRYLFVDEFQDTSVVQNKLVD 295 Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH----------------NIQSDILEL 345 K G+D + + Q + F V+ +N+ I++ Sbjct: 296 LLVK-GKDNPNIFVVGDDDQSIYRFQGVSANNIRDFDKKYKPTKIVLDENYRSSQAIID- 353 Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFH-VCHSPQREVEVLHDRLLAMLEEDPTLT 404 +R + N E D + + + E+ + + ++ D ++ Sbjct: 354 ASRQLISHNPREEKLLIAAGANKDYDYQLPILKSYENAKAEMFGVLTEIKELI--DSGVS 411 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 P +I V+ +SY F D+ + + + + S P + + Sbjct: 412 PNEIGVIY-GRNSYG----EEFAKILRDKGIFVQMKENKDLFSEPFFKKIV--------- 457 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 +L L P +R LR+ V + Sbjct: 458 ----AILKYLCKP---------SRDVRELRKIV--------------------------Y 478 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 +L M + + + IAE+ L + ++N + L+ L Sbjct: 479 FDFFEVVLSQIVMIRNLKKDEKISI-----PTIAEIDQKLEIIRKKVNQSSKYLSPMYVL 533 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 + L ++ + + E + + + + ++ + + + ++L Sbjct: 534 SDVLKSLS--IDEYIMKSKE-KYHLVSVLNELYKLM--LMECHIHPKLTVKGFLNQL-SA 587 Query: 645 LDQERISQ------RFLAGPVNICTLMPMRSIPFKVVCLLGMNDG-----VYPRQLAPLG 693 L++ IS + V + T + + F V ++ NDG +P G Sbjct: 588 LEEMGISLPIEDISGSPSNCVQLMTAHGSKGLEFDHVFIMKCNDGKKKSEAWPGGENNSG 647 Query: 694 FDL----MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 ++ K + + + +++R LF A+ A++ L++SY S + + L+ Sbjct: 648 RFSYPPSLNGKDENESQLKEEENRRLFYVAMTRAKKVLHLSYANDSTKTH-------LIN 700 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 E ++I + E + Sbjct: 701 EFEEFIDEVDVTESFEDCQSVDKV------------------------------------ 724 Query: 810 ASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 K + + + L ++ + TL F P+ +F L++ T + Sbjct: 725 --VMPKFSNNVINEIFDEL--SLSVSTLNSFLKCPLSFYFNKGLKLPSETNE-------- 772 Query: 870 FILEGLSRYQINQQLLNAL---VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQE--- 923 + I ++L + V+ + L + + + F +F E Q Sbjct: 773 ----AMVFGSIIHEVLEKIYISVDGSQSSELTAKTVLSLEEALKLFETVFEEKSYQLTSN 828 Query: 924 -------------MQQLADRVIACRQPGQSMEIDL----------------ACNGVQITG 954 ++ L + + ++E+ + + ++I G Sbjct: 829 KIKKDDYARGKKIIENLYKKSGYLKDGVVAVEVPIQGIRLGDILNTTVDLSEVSNIEING 888 Query: 955 WLPQVQPDGL----LRWRPSLLS 973 + +++ DG + ++ Sbjct: 889 KIDKIECDGNIVCLVDYKTGNFE 911 Score = 46.3 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 19/162 (11%), Positives = 46/162 (28%), Gaps = 18/162 (11%) Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT------EPFILEGLSRYQINQQ 883 +++ + L R+ P +F+ LQ++ S G + Sbjct: 1050 KSLSVSKLNRYLRCPKSIYFEDVLQLSQAAGLSAGAKEKSTKITINHAPTGPVFGTAIHE 1109 Query: 884 LLNALVEQDDAERLFRRFRAAGDLPYGA--FGEIFWETQCQEMQQLADRVIA------CR 935 + + ++D F + + + E + L + + Sbjct: 1110 TMEKIYKEDLQLEDAIEFYDSSLYSHQEEIIDTMSVEELKEYGHNLLTNLFEHFIPNSLK 1169 Query: 936 QPGQSMEIDLAC---NGVQITGWLPQVQPDGLLRWRPSLLSV 974 S+E +L + I G + +++ D R Sbjct: 1170 GEHVSLEKELRVKLGDNYSINGIIDKLEFDND-LIRVVDYKT 1210 >UniRef50_D0YTA7 Putative UvrD/REP helicase family protein n=2 Tax=Mobiluncus mulieris RepID=D0YTA7_9ACTO Length = 1180 Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 120/818 (14%), Positives = 218/818 (26%), Gaps = 137/818 (16%) Query: 218 ALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYL-AKLLTRQRRHSFEDRELPL 276 +L YLQAL+A GKH P D ++ L +++ + + + L Sbjct: 208 SLYEEYLQALEA-GKH------VAQPSLVLLDDWQNANGLMQEIVCQWAATGTQVVAVGL 260 Query: 277 FRDSENAGQLFNSDGEQDVGNPLLASW-GKLGRDYIYLLSDLESSQELDAFVDVTPDNLL 335 S N + Q + L A+ G+ R +L++ + L++F T + Sbjct: 261 ADLSCNEYRGGEPQALQQLAQRLQANLSGRKVR--QKMLTETYVNDRLESFWRDTVNTFG 318 Query: 336 HNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA 395 + + E K + S + + R+ + L Sbjct: 319 VS--------TTLDLWKPLGEAHPVPQEKPSAEDGLSGVHLIEAANDARQYRFIGRFLQE 370 Query: 396 -MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA-RQSHPVLEA 453 L DP++ + V+V Q +P ++S+ + Sbjct: 371 VHLFSDPSVPYSQMAVLVNSKAVGHSVCQQ-----LKSLGVPASLSEATSQINEGRFSAW 425 Query: 454 FISLLSLP-DSRFVSEDVL--ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 + LL L + D L L F LR L + + + Sbjct: 426 LLRLLKLACAKTWDFTDFLITDFLQSEF----FGWGSARLRQLDDALKDLAYPMPRQS-D 480 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL------VGHL 564 + + W ++ + + W+ +L E L Sbjct: 481 FSQAADFESAISAWEMNTNKLG---ILPWVKEFWEDLLASRPFHNQDLETVFALGDAKRL 537 Query: 565 ASLLMQLNIWRRGLAQE-RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 A L L + ++ ++ L V D L E +T + +I+ + Sbjct: 538 AELYEVLVKVQDLWQKDSGNVQMMLWVLWDGL-----GRGEELRELT-FTSELDSIVRDQ 591 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERI------------------SQRFLAGPVNICTLM 665 L + + L D QR V I T + Sbjct: 592 LNLELDLVMDLFKAADWYEQRYPGGDAAVFAKKMFDRSLPTVSVAPHHQSTDAVTITTPI 651 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLG------FDLMSQKP----------KRGDRSRR 709 S +KVV + G+NDG +P + P FDL K G + Sbjct: 652 GAASRHWKVVAVAGLNDGAWPSRSWPGDLLGTSMFDLSRDDTGTDCANLEVIKAGFQWSF 711 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 D FL A+ A + L + PS LV L D + E + Sbjct: 712 HADLRRFLAAITRATETLVL-----GTTTGDFESPSPLVLRLADNPAIVVHKDVGEFTSK 766 Query: 770 DE-----------------SEARVKAHLTCLHTRMPFDPQNYQ----PGERQSYAREWLP 808 E + ++ + L Q QS A L Sbjct: 767 PEGTENSGAGTASFALLDNPPSNLRDMVARLRILTMLSDAQVQMLGVGSAEQSEAASLLA 826 Query: 809 AASQAGKAHSEFVQP----------------------LPFTLPETVPLETLQRFWAHPVR 846 A + + P + + ++ +P Sbjct: 827 WLGNAPGSAARAANPENWMGILRPTVVEPAVSAGETTVENKPVFRIRASGMESLLNNPFD 886 Query: 847 AFFQMRLQVNFRTEDSEIPDTEPFILEGLS----RYQINQQLLNALVEQDDAERLFRRFR 902 + R E+ I + R+ + + + E Sbjct: 887 TEMSRLGYEDEREEEYNAAIIGTLIHKVAEEMGRRHWYGSSCDDKVDKLKREEICEETAG 946 Query: 903 AAGDLPYGAFGEIF-WETQCQEMQQLADRVIACRQPGQ 939 L G+ E + + + + L R+ Q Sbjct: 947 LMEKLLEGSRAENWMFINFERRLNYLLKRMNEFLYDHQ 984 >UniRef50_Q3SWM3 DNA helicase/exodeoxyribonuclease V, subunit A n=15 Tax=Bradyrhizobiaceae RepID=Q3SWM3_NITWN Length = 1202 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 86/758 (11%), Positives = 178/758 (23%), Gaps = 155/758 (20%) Query: 309 DYIYLLSDLESSQE--LDAFVDVTPDNLLHNIQSDILE--LENRAVAGVNIEEFSRSDNK 364 D+IY ++ E F D +H + + + L + A V++ D + Sbjct: 483 DFIYSFRSGKTILESVDHVFRDPAIYASIHAVGAHPVHESLADAAPGIVDLWSLEERDKR 542 Query: 365 RPLDPLDSSITFHVCHSPQRE-VEVLHDRLLAMLEED---------PTLTPRDIIVMVAD 414 ++ + SP+ + + D + +++ + L DI+V+V Sbjct: 543 EEMEGWRAPFDAVTATSPEVKLARRIRDEIKSLIAQGAMTGHLGNRRPLGYGDILVLVRR 602 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 + + A +P A +DR H + ++L + L Sbjct: 603 RGNAFDAVI----QALKQSGIPVAGADRLKLTEHIAIIDLMNLADALLLPRDDLALAVAL 658 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 P+ F + ++ L L Sbjct: 659 KSPL----FGLDDDDLFKLA---------------------------------------- 674 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 WQ ++ A L A++ P + Sbjct: 675 ---------WQRKGTLRDALAGHATADDKFRDAFESLKRCESRAARDTPFA----FFAWL 721 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 L + L + L L + + Sbjct: 722 LGEEAGRRRILRRLGHEANDALDEFLELALTCERKAPASLQGFMAWLRAADTEVKRDMEI 781 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLG---------------MNDGVYP---------RQLA 690 V + T+ + + VV L M G P Sbjct: 782 SRDEVRVMTVHGAKGLEASVVFLADTSTSPADTERLSLIRMGRGNAPAGVAGVTIWAGRK 841 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN----------- 739 ++Q + R L A+ A +L + + + + Sbjct: 842 AEDPPCVAQARAAMTAETEHEYRRLLYVAMTRAADRLIVGGCKPANRKDVREFSWYHLIE 901 Query: 740 SERFPSVL-VQELIDYIGQSHYLPGDEALNCDESEAR--------VKAHLTCLHTRMPFD 790 S L +QE+ G+ + + + +R + F Sbjct: 902 KGLANSGLAMQEIETASGKVKRFTRPDHDDPGSNRSRIMNVIDSNILERDAGGKPLHTFP 961 Query: 791 PQNYQPGERQSYAREWLPAASQAGKAHSE---FVQPLPFTLPETVPLETLQRFWAHPVRA 847 + E + + ++ A Sbjct: 962 HPALEEAEPDAAGPAPPASPGATRIPLPPWLHLAAAPEAPARRSLYPSD-----ADEAAH 1016 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDL 907 R IPD R + +LL +L E R G Sbjct: 1017 ---------QRAPAGAIPDQ---RHRARLRGTLVHRLLQSLPEVPRDRRREAALSYLGRN 1064 Query: 908 PYGAFGEIFWETQCQEMQQLAD--RVIACRQPGQSMEIDL-------ACNGVQITGWLPQ 958 G G+ + + + D R G E+ + + + ++G + + Sbjct: 1065 ASGW-GKTEHDALAARVVAVLDDARFAPVFAEGSRAEVAIVGRLTTRRGDPLPVSGQIDR 1123 Query: 959 VQPDGLLRW------RPSLLSVAQGMQLWLEHLVYCAS 990 + P+ S+A ++ L + Sbjct: 1124 LVVTPHGVLVVDYKTSPAPASLADVPPAYIRQLALYRA 1161 >UniRef50_C0GR52 UvrD/REP helicase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR52_9DELT Length = 713 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 55/468 (11%), Positives = 122/468 (26%), Gaps = 98/468 (20%) Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGV 353 VG+ + +G G D +L F P + ++ + + ++ Sbjct: 250 VGDDAQSIYGFRGADVGNILD----------FPGTFPGARVIKLEQNYRSTQPVLSLTNC 299 Query: 354 NIEEFSRSDNKRPLDPLDSSIT--FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + + K S + + R+ + DI V+ Sbjct: 300 ILSSMGQKYEKNLFSTRTDGARPELITPSSDMAQAGAVLSRVEELSSR---YPLHDIAVL 356 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 + + + Y ++ +SL+ + Sbjct: 357 FR-----AAYHAYPLEVELNKASIGYQKFGGMKFSEAAHIKDVLSLMRMVQDPPEILAWK 411 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 L + + + L Q S D +++ E L R Sbjct: 412 RGL-----GLLKGVGPKTAQRLYQAYCTSLTSG--DGSELKKFETKNEQFAGLMELLRRQ 464 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 A S S L ++ + R +E+ +E+ Sbjct: 465 KNLPASPS--------------------------SFLTEVLDFYRPFLEEKHMEDLPRRL 498 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 + E +T +A +A+ + + Sbjct: 499 SGL---------EQLEQITSAYNHLEAFLADMVLENSDP-------------------VG 530 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 + + + T+ + + + V L+ + + +P + A D D+ Sbjct: 531 MQAREDALVLSTIHSAKGLEWSAVLLIDLVEERFPSRRA------------MQDPDDMDE 578 Query: 712 DRYLFLEALISAQQKLYI----SYIGRSIQDNSERFPSVLVQELIDYI 755 ++ L A A+ L + S RS N +PS V+E+ + Sbjct: 579 EQRLLYVACTRARDYLGLFVPQSIYQRSTGFNQRVWPSPFVREIDTSL 626 >UniRef50_B8DWI6 UvrD/REP helicase n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DWI6_BIFA0 Length = 1378 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 59/467 (12%), Positives = 131/467 (28%), Gaps = 41/467 (8%) Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG------RDYIYL 313 L Q + + L + S VG+P + + G R +I Sbjct: 332 LDEFQDTSTTQSALLAALFHVDEPHGTDRSAAVSAVGDPFQSIYAWRGASPGAFRMFIND 391 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS 373 +++ L ++ +++ ++ R + + + D S Sbjct: 392 FHMPAAAEPLPMTRTRRNSRVVLQGANNLTKVLRRVEQRPSSANAQEVPVQPLRNVDDGS 451 Query: 374 ITFHV-------CHSPQREVEVLHDRLLAMLEE-DPTLTPRD--IIVMVA---DIDSYSP 420 + + +EV+ + + +E+ P D + V+ + Y Sbjct: 452 VEVDEGTLAVLGFQTRGQEVDAVTRFVKQSVEQYGDACKPGDSPVAVLFRGKKSMALYED 511 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 + V L A P ++ ++LL + + ++ LL P Sbjct: 512 QLSQVTLRDGRP--LRVRAVGLSAMLDRPEVQDVLALLKVVGDHTDANALMRLLATP--- 566 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT---RMLLGYAM 537 R+ + L+ L + + + L T + W + R Sbjct: 567 -RYALGALDLKRLARRAADLNTEYRFRTLVEAGLAPAGTPKREWGALVRQYARNAPNMVY 625 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE-----RPLEEWLPVCR 592 V E++GL E + + ++ + + Q E L + Sbjct: 626 LIDMLLRDDVEAQLEAAGLSDEGRAGVMQAVRAMHRVQDEMYQPLAQVIHTAVEALNLDV 685 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIA----EGLGAQYGDAVPLSLLRDELAQR---- 644 D++ A L A + A++ L L Sbjct: 686 DLMVASSLRTGGAPAPRDAVRAAIDALLETVNTYTSEIAQQQRPTLRGFLTYLDMANGSD 745 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 + + V + T+ + + + V ++GM G +P Sbjct: 746 MPEAAADLGDEPADVVLMTVHQSKGLEWDAVAIVGMQQGAFPSNKGD 792 Score = 52.5 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 76/263 (28%), Gaps = 30/263 (11%) Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD-------NSER 742 P ++L ++ + R+ D+R L AL A+ ++Y + Sbjct: 896 EPDAWNLSQKEER--GRALHADERRLMYVALTRAKHDALVTYSVGATTSRIPEDNAKESG 953 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH---------------LTCLHTRM 787 PSV +EL D + L +++ A L R Sbjct: 954 APSVFWRELRDSMSCDDSFSQRVELTAFDNQTTAPARPVAATAGNTAVTYDDLESTQPRS 1013 Query: 788 PFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL----PETVPLETLQRFWAH 843 + +P A + + E ++P+ P + E + R Sbjct: 1014 LHERGAKRPEGVIVGKGAEQFATLLVDEPYEEPMEPIDTEQHLPWPSRLS-EEMHRTLRK 1072 Query: 844 PVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRA 903 Q Q N E + + L +R Q+ + E A+ + + R Sbjct: 1073 GAAQVVQRMSQNNPTDMPGETAEGDGRSLLERAR-QLIDNRATLIREGMTADEIEQAVRM 1131 Query: 904 AGDLPYGAFGEIFWETQCQEMQQ 926 G A ++ + + Sbjct: 1132 RGQRVLAAKDKLTATGLQRNAEA 1154 >UniRef50_A6P133 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P133_9BACE Length = 1053 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 54/530 (10%), Positives = 122/530 (23%), Gaps = 116/530 (21%) Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASW 303 C Y + + + + + + + LL +W Sbjct: 596 CGAYQAMLAERGAMDFDDLLLSELARAEGAADKDLKPFTHLLVDEFQDCDPIQYRLLRAW 655 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH-----------NIQSDILELENRAVAG 352 + G + + Q + F + H + + Sbjct: 656 NRAGESLFVI---GDPDQSIYGFRGGDGASWRHLAEDWPEVRTVRLTENYRSRAEILRCA 712 Query: 353 VNIEEFSRSDNK--RPLDPLDSSITFHVCHSPQREVEVLHDRLLAML--------EEDPT 402 + + E + + + + +P + + + + + Sbjct: 713 LPVIEKNGGGPRGLHSVPGDGGRVRLVTADTPLSQGIFVAREIGRQVGGMDMVSAHGEAA 772 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 T D V + +P A+ + +H + + Sbjct: 773 RTFSDFAVCCRTRRQL-----ELLEECLRKEDVPCAVVGKGGFLTHRTVRGALGFFRALA 827 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + LAL+ G D + Sbjct: 828 WPEREDPSLALM-------------------------LGFDCPPDKAHAAAEVWRQENGS 862 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 A+ + +L+ QL L Sbjct: 863 PVERARAAEAAC---------------------PDADGLSRFRALMEQL----APLVGRD 897 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 L +N E M + ++ + + ++ + D L Sbjct: 898 KPVRLLEAYGRAVNQAGTEPLERLMNMAVFHRRMEDFL---------LSLTVGREADLLR 948 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 Q + AG V + TL + + F VV L G+ G+ P + + Sbjct: 949 SA------GQGYRAGYVTLTTLHAAKGLEFPVVFLCGVEKGLLPYCS----------RRR 992 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 D ++R LF + A ++L + + PS + ++ Sbjct: 993 ASDP---AEERRLFYVGMTRAMEELILV---------AGPEPSPFLADIP 1030 >UniRef50_A7NRM2 UvrD/REP helicase n=2 Tax=Roseiflexus RepID=A7NRM2_ROSCS Length = 1180 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 61/471 (12%), Positives = 122/471 (25%), Gaps = 88/471 (18%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL------DPLD 371 S+ LD F P+ + + + L+ AG + +RP Sbjct: 489 ASAANLDEFPRYYPNARIFYLTRNYRSLQPILDAGAAVMSGDPRAAERPPLVAQRNGGGA 548 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLE-------------------------------ED 400 ++ Q E L +L + Sbjct: 549 HTVVEWAAPRSQDEYAALARDILRRVRLRNRWLASGCAARCRMPRSGTMRRVARRPPLST 608 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 D ++ + + + AV +P + P ++ +++ + Sbjct: 609 RQWRFGDHAILCRTHEQ-AGAVAAVLE----THGIP--VDYINDVFDTPGVKDALAVCAQ 661 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 + + + AL + L L S Sbjct: 662 VGATNSAGLLRAL-----TMPEHRLDPADLNRLVDLARRSQ------------------- 697 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 A+ A + Q + E++ + + L + L Sbjct: 698 --------------QALPRAARDPQIIACLSEAAQQTLARIRIIVEALEGEGDAWQVLTA 743 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 L R L + + + Q AI + A D S D Sbjct: 744 Y--LFRHSRAMRARLIHAAQGHIRAQRELAALGQLL-AIARNFVRAAAPDECDASHFIDY 800 Query: 641 LAQRLDQE---RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 + R S V + T+ + + F +V + G+ +G +P + G L Sbjct: 801 IRALRAAGVRPRSSIGGQVDAVRVMTVHAAKGLEFPIVYVPGLQEGRFPVRGNQRGIPLP 860 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 + + S ++RYL A+ A+ +L +S S L+ Sbjct: 861 AGLIRGPIESEEQEERYLLYVAMTRARDRLVLSRSLTCGDGAKSAERSSLL 911 >UniRef50_Q311L2 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q311L2_DESDG Length = 997 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 76/585 (12%), Positives = 163/585 (27%), Gaps = 92/585 (15%) Query: 351 AGVNIEEFSRSDNKRPLDPLDS--SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 ++ E ++ +P D +I +H +++ L +L + + Sbjct: 275 EHESLLEQWQAGTVLLEEPEDRHATIEYHEGFDLHSQLDALQKKLTQTDSLEQS------ 328 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLP---YAISDRRARQSHPVLEAFISLLSLPDSR- 464 V++ D P + +LP IS P+ + +++ L + R Sbjct: 329 AVVLPDSGMLMPLL----------HHLPRKDVNISMGYPLGKSPLAQLLDTIMDLQEGRT 378 Query: 465 ---FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 + ++ L+ P L L+ + + + S + D Sbjct: 379 PSGYPWRRIIDLIRHPYLKMLSLHNARPLQQVFRHMERSVRQGARHTDPRNLQIEYLAEA 438 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 G + + L E +L G LA + L Sbjct: 439 DATGAGTAAVDDEALAALVSRIFDLTLTRWERVSTPQQLAGVLADMCTLL---------- 488 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + + + E L+ + A+ + + LL L Sbjct: 489 ---------LEQGADMWKRFPVDAECMYRLMHRVIPALRESTVR---DAELDSGLLYTIL 536 Query: 642 AQRLDQERIS-QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 + ++ ER+ + + + ++ R + F+ V +L + P A + + Sbjct: 537 REVMNAERVPFEAEPLTGLQVMGMLEARLLRFRRVYVLDATENNLPGVPANDPLLPENLR 596 Query: 701 PKRGDRSRRDDDR---YLFLEALISAQQ--KLYISYIGRSIQDNSERFPSVLVQELIDYI 755 G R +R Y F + A++ LY + +S + ++ S ++ELI Sbjct: 597 GLLGLPDIRHRERVSAYNFFRLIKGAREVTLLYQAGTTQSGLFDEKKQRSRFLEELIWQD 656 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 Q SY+ + Sbjct: 657 EQRTGRLLQAGTP----------------PLHAV-----------SYSIPAISLHDAVIP 689 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 + + L V L + PV F++ ++ + +E D L Sbjct: 690 RSATIDDRIRELLARPVSATMLDSYLRCPVSFFYERLCRIAPAEQVNEGDDH-------L 742 Query: 876 SRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQ 920 + +L + + R G L A +F + Sbjct: 743 GVGDLMHAVLQEFFTPYAGQEITR-----GQLDAKALTGLFHQRL 782 >UniRef50_A9RPQ2 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RPQ2_PHYPA Length = 699 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 55/412 (13%), Positives = 121/412 (29%), Gaps = 60/412 (14%) Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL--AMLEEDP 401 E ++ + S N+ + D I C + E + D +L A + Sbjct: 204 EFQDTSRMQYRFLRLLASHNRVTIVGDDDQIAVMECRTEAAECSFVVDSILTNAAGQGSS 263 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 T I V+ +F SA R +P+ + A ++++ IS+L Sbjct: 264 NPTFGGIAVLYR-----RQVTGRMFQSAFRSRKIPFNV-HGVAFYRKKIIKSVISMLRTV 317 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 +L A + + + + ++V++ + A + Sbjct: 318 LPGNTDIYWRRVLK-----ALYSGDKSECKKIIEYVDKVAKSSNTSFHQAAQTIFTA--K 370 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 + F ++ LG + ++ + + L+ L+ + Sbjct: 371 VSGTFSRKQLALGRRVLTSVNMVHCLAHKE----------RSLSGLVTAVVNLLPQRPVF 420 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP-------- 633 +LN P E + + + + D++ Sbjct: 421 NSRAVVDEDGGKLLNEDDDPRTVLEYFLDDVSEFLSNFCSSFSQCDEDDSIVCGQVPQEE 480 Query: 634 ------LSLLRDELAQR-LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 L D L+ R + + ++ V + T+ + +N+G Sbjct: 481 GGCLSILKAFLDHLSSREAENFQQRKQDNKNSVTLTTMHQANDTETPL-----LNEG--- 532 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 + D +++R LF A+ A++KLYI Y+ Sbjct: 533 ------------KGQVADDSCSIEEERRLFYVAMTRARKKLYICYVVTDSLR 572 >UniRef50_C6P6T0 UvrD/REP helicase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6T0_9PROT Length = 1134 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 69/443 (15%), Positives = 122/443 (27%), Gaps = 89/443 (20%) Query: 381 SPQREVEVLHDRL--------LAMLEED---------PTLTPRDIIVMVADIDSYSPFIQ 423 +P+ E E ++ L + D T DI+V+V Sbjct: 536 TPRDEAEEGARQIEAAQFAEMLQTIARDWSVNEGGQERRATYGDIMVLVRSRTHL----- 590 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 V+ A R++P+ S R E +LL + F + +L P+ F Sbjct: 591 TVYEEALRARHIPFISSRRGGLLDTLEAEDVQALLMFLITPFADLALAQVLRTPI----F 646 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 ++ L L Q E G + + +W L + Sbjct: 647 ACSDADLMRLAQNSAEYGATSSEGGAEISAQRSALGTRTSWWQRLQHL------------ 694 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR---DMLNAFFL 600 + L L W LA + P+ + L D+L + Sbjct: 695 --------------GDPSPALRRATGLLQRWL-ALADKLPVHDLLDRIYFEGDVLARYAA 739 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ-----ERISQRFL 655 A + A + L G L EL + D + Sbjct: 740 VLPPEMRA--KVAANLHAFMEIALSVDAGRYPSLPRFLQELRELRDSKDDAPDEGKLGSA 797 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDG-----------VYP-RQLAPLGFDLMSQKPKR 703 V I T+ + + +V LL N +P ++ P F L + + R Sbjct: 798 GDAVRIYTVHESKGLEAPIVWLLDANAEKRSMAGNDVLLDWPTQEPQPSHFSLYADQASR 857 Query: 704 GDR----------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 G + + ++ L A+ AQQ L +S + E + + + Sbjct: 858 GKKRAHLFEQDAAQQAREEMNLLYVAMTRAQQALIVS----GNKGGKENRSTTWYERIAA 913 Query: 754 YIGQSHYLPGDEALNCDESEARV 776 + E + Sbjct: 914 VARDQENPLRKAVPSAVEKQGAA 936 >UniRef50_A9CUX4 Putative uncharacterized protein n=7 Tax=Rhizobiales RepID=A9CUX4_9RHIZ Length = 1068 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 76/614 (12%), Positives = 172/614 (28%), Gaps = 90/614 (14%) Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 + ++ D + V + S S P + + + + Sbjct: 405 VALVTPD----RNLARRVVVE-LQRYGIEANDSGGIPLMSSPQGGLVRLAVQVAFAPGDA 459 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 + AL+ P+ ARF + ++ + L V +R G + +V +LE + Sbjct: 460 VAITALIKHPL--ARFGLDQQSAQQLAGIVERIALRGGSGEADVDQLETLVAERSEA--- 514 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 R A + Q + + +A+ + L S+L + + + + Sbjct: 515 --RKKPHAARWLTRISDQDAEAARDFAARVADALSPLTSIL--VEAPGQRFSNAVDIGGL 570 Query: 588 LPVCRDMLNAFFLPDAETEAAM--TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 + + L + + + + I+ E + + L + Sbjct: 571 AGLTAETLEKICSDETGSLEPLWGDEAGEVLSNILLETRDSGSTLTITGHEWIGALDALI 630 Query: 646 DQERISQRFLAG-PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 + R I + R + L +N+GV+P+ F S K G Sbjct: 631 SGRMVKPRTGGHPRAFIWGALEARLQHVDTILLGALNEGVWPQAGQEDPFLSRSMKAAMG 690 Query: 705 DRSRRDDDRYL------FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 +R + F A+ + ++ +S RS + + S +Q L+ G Sbjct: 691 LEPP---ERRIGQAAHDFQMAMGAP--QVVLSRANRSGK--APTVASRWLQRLLAVAG-- 741 Query: 759 HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHS 818 D A + H+ L P P A Sbjct: 742 ----SDTATALRHRGDALLDHVRSLDQATPVSP------------------------AIR 773 Query: 819 EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRY 878 +P P++ + P + + L+++ P R Sbjct: 774 PEPKPPAQMQPQSYSFSEVATLRRDPYAIYARRVLRLDPLEPFLTDP-------GPRERG 826 Query: 879 QINQQLLNALVEQDDA--------ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR 930 + +L + + +LP + W+++ + Sbjct: 827 TLYHAILEQFIASRAPGDRTLEALREIAAAHFLDAELPDA--TALIWQSRFDKAAAAIAG 884 Query: 931 VIACRQPGQ-------SMEIDLACNGVQITGWLPQVQPD-----GLLRWRPSLLSVAQGM 978 A G +++ G+++TG ++ ++ ++ + Sbjct: 885 WEAGIASGHGRSVVEARASLEMPLAGIRLTGMADRIDLRADGTAWIIDYKTGGTPSRKQA 944 Query: 979 QLWLE-HLVYCASG 991 + L+ L A Sbjct: 945 RTLLDPQLALEAHA 958 >UniRef50_A8RAD6 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAD6_9FIRM Length = 889 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 76/612 (12%), Positives = 165/612 (26%), Gaps = 115/612 (18%) Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 I + A + + + + I F+ + ++E+E +L + Sbjct: 153 IDTYNDIAKNQIIKQFLQQGAKLSSFPKEEQEIAFYHAVNKRQEIEACAQHIL-----NH 207 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 +L +DI + + D SY I+ +F ++PY + + P + F++LL+ Sbjct: 208 SLDAQDIHITLCD-ASYPKLIEQIFQRY----HIPYTLFQQETSSQLP--KQFLALLNYV 260 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 E +LA LD + G ++L Sbjct: 261 FDPCK-EQLLACLDSEL-----------------------FTGGNIHALREYMQLFEVDL 296 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 L M G ++ + L + A LL + L Q Sbjct: 297 FDNFHHLETM-------EDSGNLMNIYTLKQLQELENKAAEAQAELL----PFFTQLNQN 345 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + + + + LN D + I ++ I+ E L Sbjct: 346 MQITNKVELIVNELNKHIHTDEDRS-----IYRKITTILYEIGDVVQTKND-----LHFL 395 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG-FDLMSQK 700 A + + S++ + + +P K +LG YP G FD Sbjct: 396 ASFFENIQGSKKQPSYQGVLIHNHKQEVLPRKYHYVLGATQTNYPAFQTKKGIFDEAYYA 455 Query: 701 PKRGDRSRRDDDRYLFLE----ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 +G S ++RY +++ + L +SY S + Sbjct: 456 LIKGYPSM--EERYAHYMEQMNQILTHSKYLILSYPVGSY-EGKSM-------------- 498 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 E+ ++ + P + + + + + Sbjct: 499 --------------EAALEIEQYAQTPSQPYPLHENYAELRLQDTLSADM---------- 534 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS 876 Q + + +R+ P F + L + + Sbjct: 535 ---AKQLFLKNGCLHGSISSFERYVKCPFSYFLRYGLSLKEPFQPGFPDAYA-------- 583 Query: 877 RYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ 936 + +L +L E + + + + E+ + + Sbjct: 584 -GTLFHYILESLTNAYGKEYSEQSSKQLRKIVDKELAHLTQIFPSMELALMNVKERLLIS 642 Query: 937 PGQSMEIDLACN 948 Q++E+ Sbjct: 643 MTQTLEVLQEFE 654 >UniRef50_A5CQ87 Putative ATP-dependant DNA helicase/nuclease n=2 Tax=Clavibacter michiganensis RepID=A5CQ87_CLAM3 Length = 1089 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 90/707 (12%), Positives = 188/707 (26%), Gaps = 129/707 (18%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 + ++ + LD I + E+ L RL + Sbjct: 329 ARIGAAGAGRQRQAGSAPGLDDDADPIQIIEAPTRALELARLARRLREEHLLG-GVPWAR 387 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 ++V+V + + A +P ++ L ++ L+L Sbjct: 388 MVVLVRSGS-----LVPQVARSLATAEVPTRMAVAGR-----ALRDDLAALALIR----- 432 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 V V+ R +T + L +G G+D +R L L + G Sbjct: 433 -------AVDVVLGRVPLTPDIAAEL-----ATGPLGGLDGVALRRLRLAMRQEELAGDG 480 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 S + +++ L L L L R + + +EE Sbjct: 481 HR--------SSDELLVEALAAPGRLETLDLAPARRLGRLARTLQGARELASADGTIEEL 532 Query: 588 LPVCRD-------MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 L + + A ++ A + P S +E Sbjct: 533 LWHLWEGSKLAKPWFEQALQTGIVADQANRDLDGVVALFTAARRFVERSPGRPASDFVEE 592 Query: 641 LA-QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL--- 696 L + ++ +S + LA V + T + ++VV + + +GV+P Sbjct: 593 LLGAEVPEDTLSPQPLADTVLVATPSAVVGAGYEVVAVAALQEGVWPNLRLRGSLLHPQR 652 Query: 697 MSQKPKRGDRSRRDD-------DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 +S + DR+ D+ + + A+ A + + +S + PS ++ Sbjct: 653 LSAVARGLDRADVDERAEVLGDELRMLALAVSRASRVVVLSATANDEE-----APSPFLR 707 Query: 750 ------------------ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 + + + D L+ ++ L +H D Sbjct: 708 LVPPAPGIAEAEAGVESGRVAKDAPAALRIRPDHPLSLRGLVGALRRELAVVHR----DA 763 Query: 792 QNYQPGERQSYAREWLPAASQAGKA--------------------------------HSE 819 G S R AA + Sbjct: 764 VLLDDGRVVSGDRTARRAADATRERGRAAASALARLAAEGVTGADPAEWYGLREPSTTEP 823 Query: 820 FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 V V L+ F P+ F + S + + + Sbjct: 824 VVDLTDPEARVPVSPSRLEAFERSPLNWFI---------DQASGGSTSTAMGIGTIVHAV 874 Query: 880 INQQLLNALVEQDDAERLFRRFRAAGDLPYG--AFGEIFWETQCQEMQQLADRVIACRQP 937 + + L+ + A R G+LP+ GE + + ++ + Sbjct: 875 MEEASLDPEADLRPAALEERLDERWGELPFESPWVGERERRQAGELIAGVSGYLRDFEAR 934 Query: 938 GQSME-----IDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ 979 G M +L ++ G + +++ + L + Sbjct: 935 GGRMLAAEGGFELEVGVARLRGKIDRIELTEEGQVVIVDLKTGRHFP 981 >UniRef50_A7HPC7 Double-strand break repair protein AddB n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HPC7_PARL1 Length = 1001 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 111/995 (11%), Positives = 237/995 (23%), Gaps = 131/995 (13%) Query: 68 FIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQL 127 F+ + +L + F ++ LLP R L +L + L Sbjct: 17 FLERLAATLLDDPSLGGRFKGSPELAEITILLPT--RRSVRALGEAFLRAGAGAPLLLPS 74 Query: 128 SSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRA 187 D+ ++ L+ P L + E L + + Q L + +VE A Sbjct: 75 IRTLGDVDEEDLILDPRGLGR-EALELPPAMPALER-QLRLARMIVEGQGGDETRALALA 132 Query: 188 NLYQRFIETLESATTCPPGLPS----------RVFICGISALPPVYLQALQALG--KHIE 235 F++ + + L ++ I + L + + L LG + E Sbjct: 133 ADLGHFLDMVLTEGADLTRLADLVPQDFADHWQITIDFLKVLTARWPEELARLGHMEQAE 192 Query: 236 IHLLFTNPCRYYW------GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L W G + + + Sbjct: 193 RRNLLLRAQAEAWTAAPPPGPVIAAGSTGSIPATAALLGVVAHLPMGAVVLPALDLDLDE 252 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA 349 + +G P AS LL+ L +++ + + +L R Sbjct: 253 ESWNIIGKPGTAS--HPQYGMKKLLAHLRATRADVGIWPGAERSAALRSRGRLLSEALRP 310 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 + + S + E + + +LE Sbjct: 311 AETTERWLGRLGALDGDVKDGLKGLALIEAPSERDEAGAVALLMRDVLERPGKTA----A 366 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 ++ D + + S + + ++ Sbjct: 367 LVTPDRK-----LARRVAMELRRWKIDVNDSGGEPLAKTAPVAFLRLVANMVTEDLAPVP 421 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 +LA L P+ AA E R V + ++ PA G R Sbjct: 422 LLACLKHPLAAAG-----EEPAKFRARVRRL-------EMHLLRGPRPAPGLDGLRAACR 469 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 A+E G+ + + + LN + +E + Sbjct: 470 ------ALEDKPGDSGEISILLDKIERSIAPL---------LNAATKKGTATSIVEAHVE 514 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 + + AE E I + L Sbjct: 515 AAERLAASATETGAERLWKGEAGEAAADFIRELMEATPAFGDIDPRFYPHFFDVLLSGRV 574 Query: 650 ISQRFLAGP-VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 + R+ + I + R + L G+N+G +P + + + G Sbjct: 575 LRPRWGRHSRLFIWGPLEARLQHADRMILGGLNEGTWPAEANIDPWLNRPMRATMGLEPP 634 Query: 709 RDDDRYLFLEAL-----ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 +R + L A SA + +++ + + + S L + Sbjct: 635 ---ERRIGLAAHDFAEGASAGEA-FLTRALK--VEGAPTVASRWWLRLASLLQGLEQEEA 688 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 A PQ +Q + L ++ P Sbjct: 689 VSA------------------------PQWWQWAHK-------LDEPAKVLTPLRPRPVP 717 Query: 824 LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 P+ + ++ P + + L + + R I + Sbjct: 718 PLEARPQRFSVTEIETLIRDPYAIYARKILGLKVLDPLDAD-------IAAAERGTIIHE 770 Query: 884 LLNALVEQDDAERLFRRFRAAGDLPYGAF---------GEIFWETQCQEMQQLADRVIAC 934 L VE + + ++ AF +W + + + D Sbjct: 771 ALEKFVEAYPRDLPENALQELINVGEEAFRQAIGRPGVAAFWWPRFLRIAKWIVDYEQEE 830 Query: 935 RQPGQSMEIDLACN--------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV 986 R + + + V ++G ++ ++ + Sbjct: 831 RAGLRHIHAETRGEILIAELAQPVVLSGKADRIDEREDGMVNIVDYKTGTVPS--IKQVE 888 Query: 987 YCASGGNGESRLFLRKDGEWRF--PPLAAEQALHY 1019 + + + G P+ +A Sbjct: 889 IGLTPQLPLEAAMMARGGFRTKDGAPIPPAKAASL 923 >UniRef50_B8DL19 Putative uncharacterized protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DL19_DESVM Length = 1100 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 111/840 (13%), Positives = 216/840 (25%), Gaps = 137/840 (16%) Query: 192 RFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDI 251 R E + T P R+F+ G S L L +H + Sbjct: 243 RATERPDGFTLPPLLAGKRLFVAGFSTLTGTEEALFLHLWRHEGATVCLHT--------- 293 Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYI 311 A +A+L R + ED L A G + G D Sbjct: 294 --DAAVAELGGRPVHWTCEDHVRWLTSWRAGAALACPPSGHTP------SITFHEGYDLH 345 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 L +E D+ + S ++ + Sbjct: 346 SQLLVMERELRADSGDAPDAPS----------------ANATPSGNLKESSLTPAIESTE 389 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 +SI + L V++ D P + Sbjct: 390 NSIP--PAPD----ADELAGT----------------AVVLPDTGLLMPVL--------- 418 Query: 432 DRYLP---YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP-----VLAARF 483 +LP IS ++ +L+ L ++ + + P A Sbjct: 419 -HHLPDKDVNISMGYPLVRSTLVRLVETLMRLQETARPAASLALPEQGPEAGPGDTFAAP 477 Query: 484 DITEEGLRYLRQWVNE--SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 ++ + IR + E P + R Y A Sbjct: 478 GGSDTAPSTMCYHWRTVIECIRHPYLKMLELDGERPLRDLFHLMENVVRGGASYVDPRAL 537 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG-LAQERPLEEWLPVCRDMLNAFFL 600 + G A L+ + L + + + + Sbjct: 538 AREVAQKAPGGEHGPAAALLHRVLELCLTRWEAADTPARVADVVGALCDLLLAHGGTLWE 597 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS-QRFLAGPV 659 + + Q+ + + A P +L L + L +ER+ + + Sbjct: 598 RFPIDAECLFRLMQRVIPALRDCELA--DTPFPREVLHTILRETLREERVPFEATPLAGL 655 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR---YLF 716 + ++ R + F+ V +L + P S + G R +R + F Sbjct: 656 QVLGMLETRLLRFRRVIVLDATEDRLPGAPGHDPLLPDSLRAMAGLPDSRRRERVAAHNF 715 Query: 717 LEALISAQQKL--YISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 L A+Q + Y + + RS + ++ S V+EL+ + Sbjct: 716 HRLLAGAEQAVLCYQTGVDRSGLLDEKKIRSRFVEELL------WREERARGGLLSPGQP 769 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPL 834 + A + +A + + + L L V Sbjct: 770 PLHAAACTVRP---------------------FRSAPRPIERTTAINDALERLLDAPVSP 808 Query: 835 ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT---EPFILEGLSRYQINQQLLNALVEQ 891 TL + PVR F + + E +E D + + L + + + ++ Sbjct: 809 STLDAWLTCPVRFFHERLAGLAPPDEVNEGDDPIAVGDLLHKVLLDFHLPHKGREVRRDE 868 Query: 892 DDAERLFRRFRAA-------GDLPYGAFGEIF---WETQCQEMQQLADRVIACRQPGQSM 941 AE L R F LP A + E + + + +R + + Sbjct: 869 LSAEHLTRLFLQRLGASGLSAQLPPDALLMLEVAGPERLGRYLSRQPERFTVLELE-EPV 927 Query: 942 EIDLACNG------VQITGWLPQV------QPDGLLRWRPSLLSVAQGMQLWLEHLVYCA 989 E + G ++ G + +V G + V W + ++ Sbjct: 928 EATIDVPGSAGRRIRRLHGRVDRVDLRDFEDGQGAVILDYKTGKVEWKPSAWSDDALWER 987 >UniRef50_Q2B8I4 ATP-dependent DNA helicase, UvrD/REP family protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B8I4_9BACI Length = 686 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 62/475 (13%), Positives = 146/475 (30%), Gaps = 86/475 (18%) Query: 305 KLGRDYIYLLSD--------LESSQELDAFVDVTPDNLL---------HNIQSDILELEN 347 K+ + I +L++ + SQ + F TP L+ I DI Sbjct: 257 KIQYEIIRMLAEPNNNLCLVGDDSQSIYGFRGGTPSFLIFFDIYYPNCRKILMDINYRSG 316 Query: 348 ------RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 + E+ + + + + F + ++E + + + + ++ Sbjct: 317 QGVIGLADSIISHNEKQIKKKMRVVKVENNFDVQFSKPINSEQEADWIVEDIKE--KQAA 374 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA--RQSHPVLEAFISLLS 459 + R+I V+ AVF +P+ + SH V+ +SLL Sbjct: 375 GMPLREIAVLYRTHAVGR----AVFERLLLS-DVPFVTFGGSSETIYSHSVIRPLLSLLR 429 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + + SE ++ P+L + + E + A Sbjct: 430 VATNLMDSEAIVD--AAPILYISR----------------------REMEETVEEVVSAN 465 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 T + +++ A + L+ L +GL+ Sbjct: 466 NGETPKDLFIQVINKIANKKN-------------GFQQRHLLTKL--------ECIKGLS 504 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 + + + + +N + + +TL ++ ++ E A + Sbjct: 505 KMTAPQAIRDIRKGTINYERQLELDERKTLTLHKEMLIELLEECEQASR-GFQSIKAFLS 563 Query: 640 ELAQR----LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 + + + E + + V + T+ + + F+VV +GM + + P +A Sbjct: 564 FVERVEEKNEEMEELRSQPDIEAVRLMTIHSSKGLEFEVVYAIGMIEKILPHSIALD--T 621 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 + +++R L + ++ LY+S + S + E Sbjct: 622 NRKEDTNLSPEESLEEERRLAYVCITRVKKCLYLSAPK--TYRGEKAKVSRFLLE 674 >UniRef50_Q72AD4 Putative uncharacterized protein n=3 Tax=Desulfovibrio vulgaris RepID=Q72AD4_DESVH Length = 984 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 93/657 (14%), Positives = 188/657 (28%), Gaps = 102/657 (15%) Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR---- 464 V++ D P + + A IS + +L+ L ++R Sbjct: 319 AVVLPDTGLLMPVLHHLPTKA-------VNISMGYPLVRSTLFRLLETLMRLQETRGSNG 371 Query: 465 -FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 + + + L+ P L L + V Sbjct: 372 LYHWRECIDLIRHPYLKMLEVEGTRPLPEVFHMVE------------------------- 406 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 R+ G + L + + +L L L L+ W R Sbjct: 407 -----DRLRGGTRFADLATVMEEALAETDVAPGTQDLCRTLLDLC--LSRWERASTPAAL 459 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA-VPLSLLRDELA 642 E +C +L + + Q +I ++ P +L L Sbjct: 460 AEAVGFLCAVLLERGGDLWERFPIDAECLFRLMQRVIPALRESELAATAFPQDVLFTILR 519 Query: 643 QRLDQERISQRF-LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 + + ER+ G + + ++ R + F+ V +L D P S +P Sbjct: 520 ETVRAERVPFEADPIGGLQVLGMLESRLLTFRRVIVLDATDDRLPGAPPNDPLLPDSLRP 579 Query: 702 KRGDRSRRDDDR---YLFLEALISAQQ--KLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 + G R +R + F L A++ L+ + + RS + ++ S V+E++ Sbjct: 580 QVGLPDARRRERITAHNFHRLLAGAEEVNLLWQAGVERSGLLDDKKARSRFVEEML---- 635 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 + E + + + Sbjct: 636 --WHEERAAGRLFRPGEGPLGTVTCTVRPFESTPRHILKTDA------------------ 675 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT---EPFILE 873 L V L + P R + + ++ E E D + E Sbjct: 676 ---VRDALARFFERPVSPSRLDAYLTCPFRFYHEHLCRLAPPDEVIEGEDPAAVGTLLHE 732 Query: 874 GLSRYQINQQLLNALVEQDDAERLFRRFRAA-------GDLPYGAFGEIF---WETQCQE 923 L+R+ + + ++ D E L R FR + P A + E + Sbjct: 733 ALNRFYAPWRGIEVTRDRLDPEMLERHFRQSLHESGLADRFPADALAMLETAGPERLRRF 792 Query: 924 MQQLADR-VIACRQPGQSMEIDLACNGVQITGWLPQVQPDGL----LRWRPSLLSVAQGM 978 + + DR V+ + + ++++ ++ G L +V G L ++ L + Sbjct: 793 LARQPDRTVVLHLEEAFTADVEVDGRTRRLGGRLDRVDRRGEGAVVLDYKTGSLRTVR-P 851 Query: 979 QLWLEHLVYCASG---GNGESRLFLRKDGEWR--FPPLAAEQALHYLSQLIEGYREG 1030 +W +H ++ + L + +G LA L I Y + Sbjct: 852 DVWEDHGLWERVRTWEPAADRPLTGQDEGSREDLLDELARRMPSVQLPCYIHLYGQA 908 >UniRef50_Q2SKI4 UvrD/REP helicase family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKI4_HAHCH Length = 631 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 59/504 (11%), Positives = 134/504 (26%), Gaps = 91/504 (18%) Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLL 314 ++ K R + + + ++ L N + + + IY Sbjct: 213 RHVLKEDAELRDALQYHLKHFIIDEFQDCNYLQFEAIRLLAANAVSITVVGDAKQSIYQF 272 Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE-----EFSRSDNKRPLDP 369 AF++ + + ++ L + R Sbjct: 273 RG-SEPTVFQAFLEAYESPSVRVLDTNYRSLNKLVQLSNKLADSMPHRLQDDIAMRAHKS 331 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 D + F + E + + +L D +P +I V+ + A Sbjct: 332 GDGVVQFASPLNVMTESNEVAANIQTLL--DAGTSPDEIAVLYRENSQRLHI-----EQA 384 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 R +PY +++ +SL + SE + E+ Sbjct: 385 LIARRIPYLVNEGVPLMRRRGPRMLLSL---CLAPSSSES--------------PLEEKY 427 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L Y+ I+W + ++ + Sbjct: 428 LEYILNHSR-INIQWRHKKSGKY--------------------------KDEAIFKYLQF 460 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 ++ G + E + + + P + ++L E ++ Sbjct: 461 ISDADGSLGEKATDIIRDIRLIKKL-----NHCPPSQVEEQLWEILLRHTYFSREGMESL 515 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 Q ++ + L S++ + +++ T+ + Sbjct: 516 PAKV-VIQQLLDGLKKGVALEQ-SAEELLAI---------NSEKTESDKIHLMTIHASKG 564 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 F V L+ +S +R D R+++R +F AL A+ +L+I Sbjct: 565 TEFDTVFLINAT---------------LSDHKERDD--NREEERRVFYVALTRAKNRLHI 607 Query: 730 SYIGRSIQDNSERFPSVLVQELID 753 S + + PS + EL Sbjct: 608 SCPQYNER-GLPLQPSPYIAELRR 630 >UniRef50_C1ZID4 DNA/RNA helicase, superfamily I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZID4_PLALI Length = 700 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 41/426 (9%), Positives = 101/426 (23%), Gaps = 81/426 (19%) Query: 321 QELDAFVDVTPDNLLHNIQSDILELENRAVAGV---NIEEFSRSDNKRPLDPLDSSITFH 377 + + F P + + + A ++ R P Sbjct: 293 ENILRFDQEYPGTNVLTLSQNYRSSPEILAASNLVMSLATEGRKKQLWTNRPPQGKPLLV 352 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 C + ++ +R+L + + ++ + V+ + A + R +P+ Sbjct: 353 NCRDDNEQSTLVAERILEL--REMGVSLKGQAVLFR-----ASHHSATLEIELSRRNIPF 405 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 ++ +++L L ++ L +L I + R L + + Sbjct: 406 IKFGGLKFVEAAHVKDAMAMLRLAENPRDIVSALRVL-----LLLPGIGPKTARQLTERL 460 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 SG + L ++ G + Sbjct: 461 -GSGSSAFEPWREHTPAAATKIHWPVFVALLRTLVKGGQTTTPL---------------- 503 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE---Q 614 L + +L + + +E Sbjct: 504 -----------------------PLQLAQVRQFLAPLLEQKYDHAPARLRDLEQLEIIAA 540 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 ++++ + + T+ + + + Sbjct: 541 RYESRSQFLAELTLDPPTSTQDFAQ-----------DPLLDEDWITLSTIHSAKGLEWDA 589 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V +L DG P +A +++R LF AL A+ L + + R Sbjct: 590 VYVLHAADGNIPADMATRN------------PREIEEERRLFYVALTRAKTHLQVYHPQR 637 Query: 735 SIQDNS 740 Sbjct: 638 YYFHGK 643 >UniRef50_Q73RK3 ATP-dependent DNA helicase, UvrD/Rep family n=2 Tax=Bacteria RepID=Q73RK3_TREDE Length = 1139 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 65/597 (10%), Positives = 152/597 (25%), Gaps = 145/597 (24%) Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT---------PRDIIVMVA 413 +K+ + L+ S F + E L R+L + + + D V++ Sbjct: 493 DKKRFNALEDSSRFLSP--VEAEAFYLAKRILELRNQGFKIRDGKSARACSWSDFAVLLR 550 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 S + + +PY +R + + ++L + + + Sbjct: 551 ASTKQSTY-----ERVFRNFGIPYRSVQQRGLFNDAPINDIYAMLKIIAYPSDKKTYAQV 605 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 L P + +I ++ L LL Sbjct: 606 LHSPFV----NIDDDAFAVL--------------------------------------LL 623 Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD 593 + + + ++ + L A L +LN ++ + + Sbjct: 624 NFTKAFDISLAEKLNEKNKDAYLRA------CDLFARLNKNILTMSCAESVTYLW---YE 674 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL------AQRLDQ 647 +FL E + + + + S D L +RLD Sbjct: 675 EAYRYFLLSNEENHHYMDLYDYLFELACQADING----LTFSQFVDLLSSHIEDNERLDD 730 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF------------- 694 + V T+ + + F +V + + P + L F Sbjct: 731 MELPLDDQKDSVQFLTVHKSKGLEFPIVIVPDCGNRGIPEKKEGLVFYNEDMGPVLYSPK 790 Query: 695 ---------DLMSQKPKRGDRSRR-DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 +L+ + + ++ + + L A A+ L IS + +Q+ + Sbjct: 791 APGLPAKAGNLIFESLRDEANAKLVAETKRLLYVAATRAESYLIISGVYNHLQNEDSKDS 850 Query: 745 --------------SVLVQELIDYIG------------QSHYLPGDEALNCDESEARVKA 778 S ++E+ + E + E + Sbjct: 851 KKDVTKDNDCSSSDSRSLEEIKSMLKLSDKTISFFELLLPALPDKHEDIIFTEILPTERK 910 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV-PLETL 837 L + N++ S +E+ A + A S + + + L + Sbjct: 911 KLFNNLKTQKHEKVNFEKLFASSKVKEFNLAEKRITTATSLAHEVNKKSREGYLYSLTSE 970 Query: 838 QRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDA 894 + + + F + L+ A + + Sbjct: 971 KD----------------KLPDSFEDKDGQKEFT--AAELGTLTHSLIEARLLNKEF 1009 >UniRef50_A6TVN2 ATP-dependent helicase/nuclease subunit A n=2 Tax=Alkaliphilus RepID=ADDA_ALKMQ Length = 1197 Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats. Identities = 39/391 (9%), Positives = 97/391 (24%), Gaps = 86/391 (21%) Query: 378 VCHSPQREVEVLHDRLLAMLEED---------PTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + E ++ R+ +L E+ L +DI+V++ +++ F Sbjct: 523 ELADIEVEARIIAKRIKDLLNEEIYDEKNEVYRRLEFKDIVVLLRTTKNWA----QSFLE 578 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A +P + F++LL + D++ +++++ P+ Sbjct: 579 AFIREGIPAYADANTGYFEAIEVGMFLNLLKVIDNKRQDIPLISVMRSPI---------- 628 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 F ++ + + ++ Sbjct: 629 -----------------------------------GEFTTAELIDIRINDKNGTYYDAIE 653 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 Y L L S + +LN W + + + D +++ Sbjct: 654 KY--IEKNEDALKDKLVSFIEKLNKWGNEARYIKIDQFIWKLLMDTGFYYYVGAMPGGLQ 711 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPVNICTLMP 666 + ++ ++L ++ V I ++ Sbjct: 712 RQANLRILFDRASQFEKTSIKGLFNFIKFIEKLQGSKGDMGAAKILGENDNVVRIMSIHK 771 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK-----------------------R 703 + + F VV GM + + L + Sbjct: 772 SKGLEFPVVIAAGMG-KNFNLRDTSADVLLHKDLGLGPKFVDSNLRTYRDSIAKLAMKDQ 830 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 ++ + A + KL I R Sbjct: 831 IKIESLSEEMRILYVAFTRPKDKLIIVGSLR 861 >UniRef50_A6L5X5 Putative uncharacterized protein n=19 Tax=Bacteroides RepID=A6L5X5_BACV8 Length = 959 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 90/803 (11%), Positives = 206/803 (25%), Gaps = 178/803 (22%) Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS 372 L + L+ + + + D + N Q+ E + S Sbjct: 225 LFTQLKDAGKAVFYWDYDEFYMKENRQAVTHEAGEFIRRNLRDFPSPLSGELFKNLSKPK 284 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 + + + + L + L ++ V++ + P + ++ Sbjct: 285 EVHYIASSTENAQARYLPQWIRNNLTTPE----KETAVVLCNEALLQPVLHSLPAEVKH- 339 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLP-------DSRFVSEDVLALLDVPVLAARFDI 485 I+ PV I+LL L R+ + V+ LL P Sbjct: 340 ----VNITMGFPLSQTPVYSFLIALLELHTHGFNFKSGRYTFQSVVTLLKHPYTRQLTG- 394 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 L + + + + + + L + + L + + Sbjct: 395 ---QAELLEKELTRNNRFYPLPGE----LGKDEFLTRLFTPLSGNLNLCIRLSETLQQVA 447 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 + + S + L +R L + + R ++ Sbjct: 448 GIYQANTSGTEDTDAFNQL---------YRESLFKAYTT---INRFRTLIEE-------- 487 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS-QRFLAGPVNICTL 664 V R L + L I A + + + Sbjct: 488 ----------------------DELTVQSETFRRLLVKVLSATNIPFHGEPAIGMQVMGV 525 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD---RSRRDDDRYLFLEALI 721 + R++ F+ + LL +N+G P+ F + + G + Y F L Sbjct: 526 LETRNLDFRHLVLLSVNEGQLPKSGGDSSFIPYNLRKAFGMTTIEHKIAVYAYYFYRLLQ 585 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 A +++ + Y S N S + + + Sbjct: 586 RA-ERITLMYNTSSDGLNRG-EWSRFMLQFL----------------------------- 614 Query: 782 CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFW 841 + P Q + G+ + + + + L + Sbjct: 615 -IEWPHPITRQFLEAGQSPQGTSPITVEKTPDVMRRMQSLFDVRANPKAKFSPSALNYYL 673 Query: 842 AHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN----------ALVEQ 891 P++ +++ ++ E S D+ F I ++ + Sbjct: 674 DCPLKFYYRYVAGLSAPDEVSAEIDSATF-------GSIFHYAAEHIYKDLTTHGKVINK 726 Query: 892 DDAERLFRRFRAAGDLPYGAFGEIFW------------------ETQCQEMQQLAD---R 930 + E L R D AF ++F+ + ++QL R Sbjct: 727 EALETLLRNEVKLQDYVDTAFKKLFFNVPQNEKPEYNGVQLINSAVIARYLKQLLQNDLR 786 Query: 931 VIACRQPGQSMEIDLACN--------GVQITGWLPQVQPD----GLLRWRPS-------- 970 ME+D + +I G + ++ ++ ++ Sbjct: 787 YAPFTFIASEMEVDEPIDIQTPKGVIKSRIGGIIDRMDSKDGTLRIVDYKTGGDADTPPH 846 Query: 971 --------LLSVAQGMQLWLEHLVYCASGGN---GESRLFLRKDGEWRFPPL-------A 1012 Q +L + C + L++ + + P+ Sbjct: 847 VESLFIPDKKRSNYVFQTFLYAAIMCRKQPTMKIAPALLYIHRAATETYSPVIQMGEPRK 906 Query: 1013 AEQALHYLSQLIEGYREGMSAPL 1035 ++A+ S+ + YRE + L Sbjct: 907 PKEAVEDFSKYEKEYRERLQGLL 929 >UniRef50_B6WA25 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6WA25_9FIRM Length = 1021 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 60/447 (13%), Positives = 133/447 (29%), Gaps = 95/447 (21%) Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 I L + + ++L F + D L+ SDI ++ + E F K + L Sbjct: 442 INLSKNFRTDKDLIDFNNYIFDRLMTKKNSDIAYKDDNHRLNYHFE-FDEKYPKVSIKAL 500 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 ++SI E E L + ++ + ++ +DI +++ + + Sbjct: 501 NASI---------NEEEYLIKEIDDLI--NSGMSYKDIAILLRSSSK-----AYLIENEL 544 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 +P++ + + FI++L + +L++L + FD +E+ L Sbjct: 545 KKAGIPFSSDISKISFETVEVNFFINILKYIANPKDDFTLLSVLRSEI----FDFSEDEL 600 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 + + ++ Y Sbjct: 601 SLIS-----------------------------------------LSSDKKFFYEKFSLY 619 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 +E EL ++ + L + + FL + Sbjct: 620 EE--NFDDELSQKISDFNTNFADFSYILNFSNMYDFANIIFEKSGYYDFLKARDRGYERV 677 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP---VNICTLMPM 667 + + ++ + D L + + R L+ V I T+ Sbjct: 678 QNIEAFIELMDDYDKNNENSLFGFLTYIDNLKNQKKDNLKASRNLSDEEDLVRIMTIHKS 737 Query: 668 RSIPFKVVCL-----------------------LGMNDGVYPRQLAPLGF--DLMSQKPK 702 + + FK V L +G+N + ++ DL+ +K Sbjct: 738 KGLEFKAVILPEASKGFNTRGKSKDMLLDKDLGIGINISDWDNKIKISSIKRDLILEKLN 797 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYI 729 D+ ++ + AL A++KL I Sbjct: 798 LNDKK---EEMRVLYVALTRAERKLSI 821 >UniRef50_B1YKK3 UvrD/REP helicase n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YKK3_EXIS2 Length = 724 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 51/467 (10%), Positives = 129/467 (27%), Gaps = 81/467 (17%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKR---PLDPLDSSITFHVCHSP 382 F D PD + ++ + + + ++ + +P +IT + Sbjct: 289 FKDTYPDATVLYMEQNYRSSKEIVETANRFIQRNKVRYPKKMYTENPSSRAITVETLPAY 348 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD- 441 + + + +L +++ ++ + S + +A +P+ I D Sbjct: 349 EDQTRYVIRQLR------EETNFKEVAILYRNNSSSINIM-----NALDLAGIPFYIKDV 397 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 SH VL+ + + L + E + + I++ L+ L Sbjct: 398 DHKFFSHWVLKDVLHFIELANDPSDVEILAQI----HTKFAGYISKVQLQRL-------- 445 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 Y +++ + + +L + E + + Sbjct: 446 ---------------------------------YELQNGENVFDLLLQHVEMKFYQKKQL 472 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 + S+ + R L + R+ L + + ++ ++ Sbjct: 473 KTIKSVFAAIQTAR--------PAAALAMIRNELG-YEKNLKKMSDSLGFSIDFLLEMLN 523 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 L+ L + V + T + + F V ++ + Sbjct: 524 TIENVASDLPTSLAFKERILHLEQLMRQAKSNKHQNAVTLSTFHSAKGLEFDRVFMIDLI 583 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY-ISYIGRSIQDNS 740 +GV P + K G ++ LF + A+ L+ +SY +S Sbjct: 584 NGVLPSSDNIKSY-------KDGQLEEMEEAVRLFYVGMTRARHDLHLLSYRYKS----K 632 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 S+ + + + + +E L Sbjct: 633 PVEESLFIANIRQILNPDQKAQKEARYASRLNEKPAGPLLQVEKNMR 679 >UniRef50_Q897P0 DNA helicase II n=1 Tax=Clostridium tetani RepID=Q897P0_CLOTE Length = 720 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 50/431 (11%), Positives = 131/431 (30%), Gaps = 79/431 (18%) Query: 328 DVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS---DNKRPLDPLDSSITFHVCHSPQR 384 + D L IQ + +N + + ++ + + I F Sbjct: 291 EYHKDGKLFFIQQNFRSDKNIVITANEFIKSNKKRYNKELFTENEEGNKIKFINTKDEYD 350 Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 ++ L L R+ ++ + S P + +P+ I D Sbjct: 351 QINFLVKNLKEKSN------LRETTILYRNNISSIPIVDR-----LIQENIPFYIKDSVP 399 Query: 445 -RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 + V++ +S L + + + + ++ L L + + Sbjct: 400 SFFNSWVVKDILSFFELAFDLTNIDAFEKI----YYKMKSYVKKDDLNILYTRKIKESVF 455 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 + G + + L + S+ ++++ Sbjct: 456 RTL---------YNNQGYSSANYRLKSFEEKFMKLSSLSGYKAI---------------- 490 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 + + R L E + ++ + +N ++ + Sbjct: 491 --NFI------RYELNYEDYMMDYCDKFKFNIN--------------NVQTILSILAMVL 528 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 + + L+ L +++ + +F V + T+ + + F V ++ + + Sbjct: 529 SSCPTLEDIDGKLI--YLKDEMEKSKYKGKF--NGVILSTMHSCKGLEFDTVYIIDLIEH 584 Query: 684 VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF 743 + P + K K+ D S +++ L A+ A++ LY+ I ++N + Sbjct: 585 IIPSPESLD-------KSKKDDYSDFEEETRLMYVAITRARKNLYL--INTLTRNNKKCT 635 Query: 744 PSVLVQELIDY 754 PS+ V++L Sbjct: 636 PSIFVEKLYKI 646 >UniRef50_B2JFG2 UvrD/REP helicase n=33 Tax=Proteobacteria RepID=B2JFG2_BURP8 Length = 750 Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats. Identities = 44/424 (10%), Positives = 99/424 (23%), Gaps = 74/424 (17%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQRE 385 F L + + A + + + N P + Sbjct: 332 FDPPARQVTLERNYRSTQPILEASNAVIGLASERYTKNLWTDKPSAQRPHLVTVADDADQ 391 Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 + +++LA + + + V+ + A R +P+ Sbjct: 392 ARYVVEQVLA--AREAGMKLKSQAVLFR-----AAHHSATLEIELTRRNIPFVKFGGLKF 444 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG----LRYLRQWVNESG 501 ++ +S+L ++ + + + L + + G Sbjct: 445 LDSVHVKDVLSVLRWAENPRDRVAGFRV-----VQLLPGVGPATAARVLDDIAARADALG 499 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 G++ + L +A A + Sbjct: 500 SAGGLEAAHGVSTCAAGA------------LTAFAPP-------------------ARTL 528 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 + + ++ P + R + E + Q ++I Sbjct: 529 EDWHPFVAMMASV---CGRQTPWPAEFEMVRRWYEPHLQRNHEDASIRQADLVQMESIA- 584 Query: 622 EGLGAQYGDAVPLSLLRDELA----QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 G EL E + + T+ + ++ V + Sbjct: 585 -------GTYASRERFLTELTLDPPDATSDESGVPLIDEDYLILSTIHSAKGQEWRNVFV 637 Query: 678 LGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ 737 L DG P G D++R L A+ A++ L+I R Sbjct: 638 LNGVDGCIPS------------DLGTGSEEEIDEERRLLYVAMTRAKEDLHIVMPQRFYV 685 Query: 738 DNSE 741 N Sbjct: 686 HNQT 689 >UniRef50_UPI0000F51769 UvrD/REP helicase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI0000F51769 Length = 889 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 56/566 (9%), Positives = 168/566 (29%), Gaps = 85/566 (15%) Query: 214 CGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRE 273 I+ L P +++ L + + + + + + + ++ + ++ + Sbjct: 167 DNINELNPNFIKILDRYENSMNKN-KIISFSQLIYFAVNKIKDNKEKISNIKYLLVDEYQ 225 Query: 274 LPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLS---DLESSQELDAFVDVT 330 + Q+ + VG+P + + G +Y Y D +++E + Sbjct: 226 DINKVQYDLIKQIGENASIFAVGDPRQSIYEWRGSNYKYFEEFSNDFSNAEEFTLNENRR 285 Query: 331 PDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLH 390 + NI + I + + P+ + + RE E + Sbjct: 286 STKSIVNISNTI---------VKQFPDNPGYPDMVPVREKSGDVIATEYENASREAEGIA 336 Query: 391 DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 +++ +++D V++ +++ I + +PY ++ Sbjct: 337 NKIKCEIKKDK--KYSKFAVLLRSVNTSGDLII----DEFKKQKIPYLVAGNAGLFKRGE 390 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL--RYLRQWVNESGIRWGIDD 508 + A + + ++D + R+ +T+ L + + W +++ Sbjct: 391 VLALAQIFC-----WFADDGFWYV------GRYKLTDNELLEKAIENWETTVN---KLNN 436 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 + +L + ++ +G R+L ++ D+ + L ++ ++ Sbjct: 437 NIKDDLNHIKSSLNS--YGDYRVLYQDVLK-----RFDYSALDQDNDLDNAILANIGRFT 489 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 L + + + + + + M + Sbjct: 490 KVLGDYEQSVR------------------YGGGNKNIQKEMKDLCWFINTYANHSYQEAK 531 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + + V + T+ + + ++ V L + + +P Sbjct: 532 IEDLS---------------------KDNVVTVSTIHQSKGLEWQTVFLPSIINKRFPSL 570 Query: 689 LAPLGFDLMSQKPKRGDR--SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 ++ Q R + D + LF A+ A+ +S + S Sbjct: 571 THFKSNLMIDQSLYEYSRYETSLDSEYRLFYVAVTRAKNYCLMSNFSAYP-TGRKTSESE 629 Query: 747 LVQELIDYIGQSHYLPGDEALNCDES 772 + +ID + + N + + Sbjct: 630 FM-RIIDKYEPVEDIEIETEDNFNST 654 >UniRef50_C2KVI0 Possible ATP-dependent deoxyribonuclease subunit A n=1 Tax=Oribacterium sinus F0268 RepID=C2KVI0_9FIRM Length = 1283 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 47/379 (12%), Positives = 114/379 (30%), Gaps = 69/379 (18%) Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E +++ ++ +L + +D+++++ S + +FG +P + Sbjct: 615 ECKMIAAKVRELL--EKGYAYKDMVILLRSPHGVSREMVDIFG----KEGIPAYAELKTG 668 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 S +E +S L++ D+ + A+L P+ F ++E L + Sbjct: 669 YYSAVEVETVLSFLAIIDNPRQDIPMAAVLRSPL----FSFSDEELGEI----------- 713 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 L + L E L L L Sbjct: 714 ----------------------VLAKGGLYEKPYDKSKENAVNLSLQAEKALTPALEEKW 751 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDM-LNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 + +L +RR R + + + E ++Q + + Sbjct: 752 QNFQNKLERYRRLSRSLRLHSLLSLIYEETDYYNYVRALPLGEKRQANLDQLLED-AKQF 810 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFL--AGPVNICTLMPMRSIPFKVVCL---- 677 Y +++ ++ + + F + I ++ + + FKVV L Sbjct: 811 EKGSYSGLFHFIRYIEKVKKQEQDQGEATVFSEKDDLLRIMSIHHSKGLQFKVVFLSQLH 870 Query: 678 -----------------LGMNDGVYP-RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 LG+ ++G+R ++ + A Sbjct: 871 KTFNKMDSKAKMLMDAELGLAADYLDLETRIKYPSLHKIAIKEKGERESLGEELRVLYVA 930 Query: 720 LISAQQKLYISYIGRSIQD 738 + A++KL ++ + ++ +D Sbjct: 931 MTRAEEKLILTAVCKNEED 949 >UniRef50_B8KGL7 Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KGL7_9GAMM Length = 885 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 90/710 (12%), Positives = 193/710 (27%), Gaps = 131/710 (18%) Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS-----DILELENRAVAGVNIEEFS 359 + R + L+DL++ + + LL Q+ +L ++ + E S Sbjct: 148 RWERRFQKKLADLDA-----VTPEQALEQLLCCPQALDQPVALLSQDDLPPLHQALCEAS 202 Query: 360 RSDNKRPLDPLDSSIT-FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 S + L + + P E+++ LE+DP V+++D+ + Sbjct: 203 TSWQRVTLPVQTARHQPIRSFNDPAAELQMAAHWCRQKLEQDPQGRY---AVVLSDMHAD 259 Query: 419 SPFIQAVFGSAPA-----DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 ++ A LP S P++ + + E+V+++ Sbjct: 260 RDRLEYYLRKEFACLTKNYASLPVNFSTGFTLDRVPLVRDALRIFEFGLPEVTVENVISI 319 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 L + + D L + + R +L Sbjct: 320 LQSRFIRPL--------------------SYRKDKRERCIRRLRELARERIPQRVMRDVL 359 Query: 534 GYAMESA--QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 ++ W +VL D + R + RP +WL Sbjct: 360 DDLIDKGMGAAPWDAVLQLDTNG---------------------RWQRRARPPSQWLEPF 398 Query: 592 RDMLNAFFLPDAETEA--AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 R +L A+ Q +A+ A + A+ + L + L +++ Sbjct: 399 RAILAAWGWSQGAALDSLEYQQALQWQEALDAFATLDLFTGALTFAEAVQSLRELLSEQQ 458 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 R V + + + F + + GM+ +P P + S + ++G Sbjct: 459 FQPRTEDQAVQVLGPLETTGLRFDAIWITGMSADRWPAAAQPNPYLPHSLQREQGMPHAD 518 Query: 710 DD-DRYLFLEALISAQQKLYISYIGR------SIQDNSERFPSVLVQELIDYIGQSHYLP 762 +R A+ +++ G S +D +E PS L+ + + + Sbjct: 519 AGWERRWA-----KARWDQWVAGAGEIQTSYLSQRDGAEALPSPLIAVVPGCVESEDW-- 571 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQ 822 D + ++ L Sbjct: 572 -------------------------AMDRRWLAQASTAAFDAVDL----------KPVPL 596 Query: 823 PLPFTLPETVPLETLQRFWAHPVRAFFQMRLQV---NFRTEDSEIPDTEPFILEGLS--R 877 + V L++ A P +AF RLQ + + L Sbjct: 597 TEDERAYQGVGASVLEQQSACPFQAFAATRLQAMQTPTLAAGLLPSERGTLLHRALYDLW 656 Query: 878 YQINQQLLNALVEQDDAERLFRRF--RAAGDLPYGAF---GEIFWETQCQEMQQLADRVI 932 + AL+ + R A G L G + Q + + R + Sbjct: 657 GSLGDSAGLALIADEALRAAIERAVDYAQGGLLKERLDVVGGDLLSLERQRLDVVLRRWL 716 Query: 933 ACRQPG--------QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSV 974 A + + + +++ + ++ Sbjct: 717 ALERERSDDFAVTGREEPREHQLGELRLRLRIDRIDQLHDGAKLIIDYKS 766 >UniRef50_Q3A3V5 DNA helicase/exodeoxyribonuclease V, subunit B n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A3V5_PELCD Length = 896 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 80/639 (12%), Positives = 166/639 (25%), Gaps = 134/639 (20%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD-RYL 435 ++EV + +LE I V+V D+ +Y +Q +F + L Sbjct: 217 VAYADVEQEVRCCARWVRHLLEG----KAERIGVVVLDMTAYQSRLQRIFREELSPGALL 272 Query: 436 P-------YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 P + +S + ++ LLSL + + LL P + Sbjct: 273 PGADAEKAFNLSLGTPLLNEGMVTTAFELLSL-GRTVSLDSLSYLLRSPFV--------- 322 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 WG + L ++ + ++ L AM A+ ++ L Sbjct: 323 ---------------WGHLSEQHARAVLDRELRN---LRMGQLPLKQAMVHARRGFKKKL 364 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN--AFFLPDAETE 606 + + L ++ + AQ R W +L + Sbjct: 365 GCCDL----------FSRQLEMIDSLLKD-AQPRLPGAWARHFATLLETCQWSKDRPFNS 413 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + + + + L + G V + + Sbjct: 414 REYQVFTAWKELLAGMACLDAVSAPMKRGEALRLLRRLAADAVFQPEGSEGRVQVLGALE 473 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL--EA--LIS 722 + F + +LG ++ V+P P F ++ + + F A L++ Sbjct: 474 AAGMQFDALWVLGAHEDVFPAPARPHPFIPVALQRRLEMPHADAARELDFAHKVAQRLLN 533 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 A +L +S+ D ER PS L+ +L + Sbjct: 534 AAPQLVVSWPE--GLDGRERQPSPLIHQLPPIVP------------------------VL 567 Query: 783 LHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWA 842 +R P A A + + P+ + L+ Sbjct: 568 AESRQP--------------AALIQAVAGRLEQIADSSGPPIEAGSRISGGTGILKDQAL 613 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD--------- 893 P RAF + RL S +GL R + ++L + Sbjct: 614 CPFRAFARHRLGARALATAS-------LGFDGLDRGSLVHRVLEWFWKDIGNWQSLTALD 666 Query: 894 -----------AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME 942 ++ A +P+ + + + L +A + Sbjct: 667 SAALQQLLVKYIDQALEELEAERRVPFSKSQKHLESS---RLLALLGEWLAIEAKRPTFT 723 Query: 943 IDL-------ACNGVQITGWLPQVQPDGLLRWRPSLLSV 974 +D + + + ++ Sbjct: 724 VDTLEAWHREKFGPLTLQTRIDRIDRLADGSQVIIDYKT 762 >UniRef50_Q1IKH8 DNA helicase/exodeoxyribonuclease V, subunit B n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IKH8_ACIBL Length = 906 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 109/799 (13%), Positives = 223/799 (27%), Gaps = 148/799 (18%) Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELP----LFRDSENAGQ 285 L ++ LL N W +I + + L + + ++ ++ + Sbjct: 68 LAGVVDRALLKANVVAALWREIVANSTPGRDLLSHNAAAEQAQQAWKLIFDYKLPRSRAL 127 Query: 286 LFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL 345 + + + A + R+ + +++++ A + P+ + Sbjct: 128 YSETAESKAFHDWAEAFEERCEREGW--IDSSAATEQIAARAEQLPNLPKQIVAFGFDRF 185 Query: 346 ENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 A + + C P E+ LEE+P+ Sbjct: 186 TPAQEALWRALRNAGCEVTVLAPESESNKDHARGLACADPSDEIRTSALWARKKLEENPS 245 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL---------PYAISDRRARQSHPVLEA 453 + V+V ++ +F + IS R HP++ A Sbjct: 246 AR---VGVIVPRLEGLRETFATIFEDVLHPENRLLTRTATARAFEISLGRPLSEHPMVRA 302 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 + +L L S +E+ ALL +A + E+ R +D + R+ Sbjct: 303 ALRILRLATSSLNAEEFSALLRSRYIAGGTN--------------EASARALVDFELRRK 348 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 L T L ++L G A E G + A+ Sbjct: 349 LRATVT--------LAQVLSGKAEEKVVGAPKMAKMLRAFFAKPAKT------------- 387 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT----LIEQQWQAIIAEGLGAQYG 629 + EW + +L P E E ++ + ++W+ ++ + Sbjct: 388 ------GKLTHTEWAAEAQRILRIMGWPGDEGEFSLNSEEFQVSKKWEELLKDFCALDQA 441 Query: 630 DAV-PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + S + EL + + + A PV I + F + G++D +P++ Sbjct: 442 LPLKTASEMLRELERAAAEATFAAENEAAPVQIVGPLAASGETFDALWFCGLSDETWPQK 501 Query: 689 LAPLGFDLMSQKPKRGDRSRRDD------DRYLFLEALISAQQKLYISYIGRSIQDNSER 742 P F + + G + + +R L SA + +S+ R+ D+ E Sbjct: 502 GHPNPFIPFALQKSAGAPNTSAEWNLRDGERRTA-RLLQSANE-CVLSWPQRN--DDGEL 557 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 PS L+ + D + + S Sbjct: 558 RPSPLLAGVPP----------------------------------ATDLEIADVRDWNSL 583 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 + L KA + + L LQ P RAF Q RL E Sbjct: 584 QKGALLERYDDEKAPAIANEELKRRGT-----TVLQWQSGCPFRAFAQTRLAAEKLEES- 637 Query: 863 EIPDTEPFILEGLSRYQINQQLLNALVEQ-------------DDAERLFRRFRAAGDLPY 909 P + R I L + E+ E + L Sbjct: 638 ------PLGANAIERGNIVDTALRFVWEELRESSNLNGGIPTMTLEFVIAGAIERALLEE 691 Query: 910 GAFGE-----IFWETQCQEMQQLADRVIACRQPGQSME-------IDLACNGVQITGWLP 957 GE E + + + +L + + + + +++ G + Sbjct: 692 FPSGEESWLVRHREIERERLSKLVHDWLDVERKRHPFHSVRSQVNVTVKLGELELKGRID 751 Query: 958 QVQPDGLLRWRPSLLSVAQ 976 ++ + + Sbjct: 752 RLDQTVDGEYVVIDYKTTR 770 >UniRef50_C1PCZ8 UvrD/REP helicase n=1 Tax=Bacillus coagulans 36D1 RepID=C1PCZ8_BACCO Length = 723 Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats. Identities = 60/447 (13%), Positives = 136/447 (30%), Gaps = 85/447 (19%) Query: 326 FVDVTPDNLLHNIQSDILELENRAV-AGVNIEEFSRSDNKRPLDPLD--SSITFHVCHSP 382 F V PD + ++ + + A + I+ +K I F Sbjct: 280 FKKVYPDAKILFMEQNYRSSQEVVTTANLFIKRNKHRYDKNMFTENPPAGPIRFVRLPDY 339 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD- 441 + + + L ++ + E+ +I V+ + S I + +P+ + D Sbjct: 340 KYQAKYLAQNIV--VSEN----FSEIAVLYRNNMSSIALI-----NEFDREGIPFYLKDT 388 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 SH V++ ++++ L + + D+LA + + IT++ + ++ G Sbjct: 389 DNRFFSHWVVQDILNVMRLTFTDKRA-DILAQVHSKLDGY---ITKQQMEAVK------G 438 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 IR + Q + +++ Y + V Sbjct: 439 IR-----------------------------------NNQSVFDNLVRYANLKDYQVQKV 463 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 + L ++ L + L L + + + + I Sbjct: 464 RKVKETLREMRGM-PPLDAIHVIRGRLGY-EKALENMCKKFGFRKEYLIGVLNTLEDIAD 521 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 + + + LA L + ++ V + T + + F+ V ++ + Sbjct: 522 TLVTME-----EFAARLKHLAHILKTAKGNKG--RHAVTLSTFHSSKGLEFEKVYMIDLV 574 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL-YISYIGRSIQDNS 740 DG+ P LM ++ LF A+ A++ L +SY R+ S Sbjct: 575 DGIIPGDDEKENDLLM------------EESVRLFYVAMTRAKKSLEMVSYEKRN---GS 619 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEAL 767 S V + + + Sbjct: 620 RTMDSPFVAAVKGIVNNVEKAEKTKPD 646 >UniRef50_Q04AN7 ATP-dependent helicase/nuclease subunit A n=3 Tax=Lactobacillus RepID=ADDA_LACDB Length = 1227 Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 47/384 (12%), Positives = 105/384 (27%), Gaps = 96/384 (25%) Query: 386 VEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + ++ R+ ++ + ++ DI ++ S Sbjct: 545 LAMVISRIQKLIADQTPIFDPKTGQTRPVSYGDIAILTRSKTSNLDI-----KQEFDRYG 599 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P + D + L +S L + D+ ++A+L P+ F+ + L +R Sbjct: 600 VPLFVMDVQNYFQTFELTVIMSYLKIIDNPDQDIPLVAVLRSPI----FNFSSSDLAEIR 655 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + + + ++ Y Sbjct: 656 -----------------------------------------LVNKSVSFYAALRTYA--- 671 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 +L L QL R + + E L + + + A T + Sbjct: 672 KKDTDLAARCRDFLAQLQDLRD-FSLSHRISELLWTIYERTSFLEIVTAMTNGQQRRL-- 728 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF-----LAGPVNICTLMPMRS 669 A+ + L + +A+ ++ + V + T+ + Sbjct: 729 NLTALYERASAYESSGFKDLYQFINFIARMRKNQKDLAQPILSENAGNSVKLMTIHASKG 788 Query: 670 IPFKVVCLLGMNDG----------------------VYPRQLAPLGFDLMSQKP--KRGD 705 + F VV +LG+ YP A D ++ Sbjct: 789 LEFPVVFVLGLEHRYNYQQDITGSYVLDASGLGLSFAYPFDEAEYRADTLANAWLKIAKK 848 Query: 706 RSRRDDDRYLFLEALISAQQKLYI 729 + +++ L AL A+QKL + Sbjct: 849 KKLLEEEARLLYVALTRAKQKLIL 872 >UniRef50_UPI0001AF5A75 exodeoxyribonuclease V, gamma subunit n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF5A75 Length = 249 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 77/239 (32%), Gaps = 34/239 (14%) Query: 900 RFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQS-----MEIDLACNGVQITG 954 + +A+G LP FG + + + + R + I + +GV I G Sbjct: 14 KLQASGLLPLAGFGTSMQDELIEPLPDVLKRYHDLLTLWPETLSSALPISFSHSGVSIDG 73 Query: 955 WLPQVQPDGLLRW-----------RPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKD 1003 WL + +G + ++ W+ HLV CA S + D Sbjct: 74 WLGGLHRNGSGELLLVTAIPNSIGSKKTRKWHRLIRPWVNHLVACA-CELPLSTALVASD 132 Query: 1004 GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDST 1063 P+ A+ L+ L+ + GM PL V ++ AWL Sbjct: 133 ETLMLEPMERTAAVSTLNHLLMAWLHGMQRPLPVAVKTAFAWL--------------GQP 178 Query: 1064 LQKARTKFLQAYEGN-MMVRGEGDDI-WYQRLWRQLTPETM-EAIVEQSQRFLLPLFRF 1119 KA +AYEG+ GE + R + E + P++ Sbjct: 179 ADKAEAAARKAYEGDGQTTDGERRESTALARQFPDFDALMESEEFAGWCETLYKPIYDA 237 >UniRef50_B8HWJ9 UvrD/REP helicase n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HWJ9_CYAP4 Length = 827 Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats. Identities = 67/498 (13%), Positives = 135/498 (27%), Gaps = 78/498 (15%) Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 L NR + R R L H P+ E + +L ++ + Sbjct: 309 LANRVIEHNRTRYRKRLSLTRGLR---GHTHLHPARHPRELAETVVKEVLQ--SQERGTS 363 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 +++++V P A + +PY + P + + L L Sbjct: 364 LAEMVILVRTYGQTPPL-----EQAFLNAQIPYRVVGNLPFYRRPEILGLLKYLELAQLE 418 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 +T WG + L ++ Sbjct: 419 QRRLS-------------EGLTPVEQGQ-----------WGACWLQIYNTPL----RYIP 450 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 R + G + +Q + + + LA +L + L Sbjct: 451 RAVAEEIREGAVLAGECLVYQLRKTTADQPEWLQRRLRELAQVLEWVLSQTETTPAASVL 510 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 E + ++ E + +A I G Sbjct: 511 AELESRL--GYCRYLTSRSQAEETGQSRAENVRAAIQWSQGFGSVGE---------FLAH 559 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 L + R + + ++ + + ++ V L ND V P+ Sbjct: 560 LQKLEQPDRDQPHCLTLMSIHRAKGLEWETVFLPFCNDKVIPQ----------------- 602 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE--LIDYIGQSHYLP 762 R+ R+++R L AL +++ L++ ++ + S +QE + Q L Sbjct: 603 ARADREEERRLLYVALTRSRRDLHLLWL-------KDEPISPFLQESQCQRVLEQCQTLT 655 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQ 822 + E A L L + P+ Q W A++ + +Q Sbjct: 656 RIYEHSPREWSAHDLVTLVRLSPWLGL-PRYLSHYGEQP--PTWTAIAAERLQQVLRIIQ 712 Query: 823 PLPFTLPETVPLETLQRF 840 + V LE L+ + Sbjct: 713 TQGWETKLGVDLEQLEAW 730 >UniRef50_C6QAP4 Double-strand break repair helicase AddA n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QAP4_9RHIZ Length = 1196 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 63/503 (12%), Positives = 127/503 (25%), Gaps = 108/503 (21%) Query: 386 VEVLHDRLLAMLEEDPTL-------TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 E + D + L+ L DI+++V + ++ + A A R + A Sbjct: 577 AERIADTIKGWLDRGERLESQGREIRAGDILILVRKRNPFAVPMVA----ALKRRGIAVA 632 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 SDR A ++ ++L + A+L P+ F ++ L + Sbjct: 633 GSDRIALTDQIAVQDLMALGDFLILPEDDLALAAVLKGPI----FGFDDDDLLAIA---- 684 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 ++ W ++L Sbjct: 685 -------------------------------------PGRKSKTLWSALLDSTGVKPEYR 707 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 + L WR P +L+ + Sbjct: 708 DAA-------ETLKRWRAKADFTPPF----EFFSSVLDRDGAREKMLRRLGPEAADVIDE 756 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + L G L+ EL + + V + T+ + + +V L Sbjct: 757 FLDLALSYDDGTPPSLTQFLAELRAIAPEVKRDMDHGRDEVRVMTVHGAKGLEAPIVFLP 816 Query: 679 G--------------MNDGVYPRQLAPLGFDLMSQKP----------KRGDRSRRDDDR- 713 + PR + + K +RG +R ++R Sbjct: 817 DTCTTASGDLSAASLVRLSGLPRPDHIPEPIVWTVKGTSRLEAVTIARRGREAREHEERN 876 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFP-----S----VLVQELIDYIGQSHYLPGD 764 L A+ A+ +LYI G + S + +E+ D + + Sbjct: 877 RLLYVAMTRARDRLYI--AGFEGKKGRAESCWYDAISEALLPVAEEIDDNGKKVWRIETA 934 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER-----QSYAREWLPAASQAGKAHSE 819 + D+S L + + S + P A ++ Sbjct: 935 QTAELDQSRGEKTRQLESEERPAFASERARPEPKLSVPLAPSRLEPYAPDAEGEPIMSAK 994 Query: 820 FVQPLPFTLPETVPLETLQRFWA 842 + P + + RF Sbjct: 995 ADAAATYDAPSPLAGNSEHRFLR 1017 >UniRef50_Q1YTF1 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTF1_9GAMM Length = 923 Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats. Identities = 109/866 (12%), Positives = 238/866 (27%), Gaps = 166/866 (19%) Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-----------GE 292 RYYW L + + + + L + + N E Sbjct: 89 SRYYWERAIADDGLEQPVNFVKLAGDTLKALENWNLRADQVPGENPSVEYFKRWSGRFDE 148 Query: 293 QDVGNPLLA---SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA 349 N LL SW +G+ + S L E+ + + L + + + Sbjct: 149 LLRRNKLLTIQRSWQLVGQGFD--CSALNREAEIMVYGFQSTPPLQAAL------IATAS 200 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 +E + S ++ DS +E+ + L+ +P I Sbjct: 201 SQVTRLESVNSSTEVVRIEAEDSP----------QELRLAASWAAQQLKINPEQR---IG 247 Query: 410 VMVADIDSYSPFIQAVFGSAP------------ADRYLPYAISDRRARQSHPVLEAFISL 457 ++V +++S + V A + IS A + P++ + + + Sbjct: 248 IVVPELNSSLQRVARVVNEALNTVDNNTSLENPDGVKVIANISAGTALRDTPMVHSALLM 307 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 + L + + L LL P L + E+ Sbjct: 308 IGLLKDKRPLSEWLHLLYSPY---------SAFDQL-------------PLSFRADSEIQ 345 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 ++ + F L++ + A+ L ++ ++ + L + RR Sbjct: 346 LRKRNRFDFSLSQFI--TAVTPKHKSNDDGLDNKDNQLDESDALNPLRHMRD---YERRQ 400 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT-LIEQQWQAIIAEGLGAQYGD-AVPLS 635 + ++ W L P T ++ Q W ++ + G V LS Sbjct: 401 INSQQSFAAWGEFFVGYLTDLGWPGKRTANSIEYQQRQHWNRLLEQFTGLDNLGIEVGLS 460 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 L Q + P+ I L+ + F + ++ M+ +P +A Sbjct: 461 TAFKHLQQLAQDSVFHPQTADAPLQILGLLEGSGLRFDQLWIVDMHSQNFPASVAINQLL 520 Query: 696 LMSQKPKRGDRSRR-DDDRYLFLEALISAQQ---KLYISYIGRSIQDNSERFPSVLVQEL 751 + + + + + L S + +L +S+ + + PS L+ ++ Sbjct: 521 PAEFQRLHQMPHSLPERELEIANQLLQSYKNNSGRLIVSHPKIRGE--EQLDPSPLISDI 578 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 +V + P P YQ + Q A + A Sbjct: 579 P------------------LGSHKVLNSHKLFDSPQPHPPWLYQDYQCQLLADQ----AP 616 Query: 812 QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI 871 +++ P AF RL+ E S+ Sbjct: 617 PYSPRLETIRGGSNLLKNQSI----------CPFNAFVTHRLKAEPLEEPSQ-------G 659 Query: 872 LEGLSRYQINQQLL---------------NALVEQDDAERLFRRFRAAGDLPYGAF--GE 914 L L R + ++L + + P G+ Sbjct: 660 LSALDRGSLLHEILFRLWGIWKTSATLQALSDQQLQQQLATTIEQTLTEWAPRHPILRGD 719 Query: 915 IFWETQCQEMQQLADRVIACRQPGQSMEI-------DLACNGVQITGWLPQVQPDGLLRW 967 F + Q +++L + + + E+ + ++I L +V G Sbjct: 720 RFRGLEQQRLEKLLTQWLEEEKLRPPFEVVELESKNSVRFGDLEINLRLDRVDQIGDKLL 779 Query: 968 RPSLLSVAQGMQLW-------LEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQAL--- 1017 S A W + +Y + + + + + + + Sbjct: 780 IIDYKSGAVKESSWSGTRPVDPQLPLYVLASNPRANGCAFAQIKGGKIKFVGSTDSKFLA 839 Query: 1018 -----------HYLSQLIEGYREGMS 1032 ++ I+ ++ +S Sbjct: 840 SEKVTGDTDLSQQWAEQIDAWQSALS 865 >UniRef50_B8IZF8 Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IZF8_DESDA Length = 1000 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 99/723 (13%), Positives = 182/723 (25%), Gaps = 124/723 (17%) Query: 433 RYLP---YAISDRRARQSHPVLEAFISLLSLPDSRFV-----SEDVLALLDVPVLAARFD 484 +LP +S + P+ LL L +R +L L P + Sbjct: 347 HHLPHKDVNVSMGYPLERSPLNRLLDGLLRLQATRSDEGRYYWRHLLQCLRHPYVNMLR- 405 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 P + R + G Sbjct: 406 -------------------------TRDAYGQPLLLRDALRPLERIIREGTRFVDLDEVI 440 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 E G + E + L L R A E+ V + + + Sbjct: 441 ------LECRGQLPEALAQLLE--ETLEALVRAPAGAATTEDMARVLHGLCSFLRCRGDD 492 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYG-----DAVPLSLLRDELAQRLDQERISQRF-LAGP 658 L + ++ + + PL+ L + L QER+ Sbjct: 493 LWRHFPLDAEAMYRLMRQTVPVLRENLLARTPFPLTTLHGMTREVLGQERVPFEADPLTG 552 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR---YL 715 + + ++ R + F V ++ D P A S + G R +R + Sbjct: 553 LQVLGMLETRLLHFGRVFIVDATDDRLPGNPAQDPLLPDSLRQVLGLPDSRRRERAAAHT 612 Query: 716 FLEALISAQQK--LYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 AQ+ + I RS + ++ S V++L+ Sbjct: 613 LYRLCAGAQEVSFFWQEGISRSSLFDGKKSRSRFVEQLL--------------------W 652 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP 833 A L P P E + + + ++ L L E + Sbjct: 653 QEELARGAVLAPGEP-------PLETAVCEVRAAASGEKQLERSADMNDALARLLREPLS 705 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT---EPFILEGLSRYQINQQLLNALVE 890 L + P+R +Q + E +E D I + L + + LN V Sbjct: 706 ATRLDVYLQCPLRFAWQYLCGLRPPKEINEGDDPAAVGTCIHDTLK--ALYEPYLNKTVR 763 Query: 891 QDDAERLFRRFRAAGDLPYGAFGEIFWE----TQCQEMQQLADRVIACRQPGQS---MEI 943 D R R L ++ + R + + + +E Sbjct: 764 SGDISAETVRARFYEQLEAHGLRKLLPADSCLMLEEAAPMRLMRFLENQPADVTIMALEK 823 Query: 944 DLACNGVQITGW-LPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRK 1002 +L +++ G V + WR L V ++ L G F + Sbjct: 824 ELKV-PLRLAGRDYAFVGAMDRVDWRDGLFYVLDYKTGGIKKL----DGSLWTDLAFFSR 878 Query: 1003 DGEWRFPPLAAEQA-LHYLSQLIEGYREGMSAP--LLVLPESGGAWLKTCYDAQNDAMLD 1059 G+ A++A +L QL + + L + A Sbjct: 879 AGQLCDTLTPAQEAGESHLQQLEALFSQLRERLPSLQLPCYLAMA-----------QASG 927 Query: 1060 DDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRF 1119 A + + + G D+ + + PL Sbjct: 928 MTPLSDAALVELRDDGREHPLFGGLVDE----------DLDAALGFCRTALAL--PLLHM 975 Query: 1120 NQS 1122 S Sbjct: 976 EYS 978 >UniRef50_C8ZW81 UvrD/REP helicase n=4 Tax=Enterococcus RepID=C8ZW81_ENTGA Length = 1226 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 112/855 (13%), Positives = 236/855 (27%), Gaps = 130/855 (15%) Query: 134 LFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRF 193 FD+Y YR + E L + + + L + L Y L + Sbjct: 289 TFDRYPSYRKE-----EQKELSQEIKPLRDDAKKLLEQLKGYFPYPPADMLQMLQLSEPI 343 Query: 194 IETLESATTC-PPGLPSRVFICG---ISALPPVYLQALQALGKHIEIHLLFTNPCRYYWG 249 + T+ T +R G + L L+ L G + + + + Sbjct: 344 VATMAEMTKEFLTAFQARKLAKGLLDFNDLEHFTLKILLGDGTGSDASVYYRDKFEEVLV 403 Query: 250 DIKDP--AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG 307 D +L R+ S + + + D + + F LA + G Sbjct: 404 DEYQDINRLQEAILYWVRQVSGDHGNMFMVGDVKQSIYSFRLADPTLFIEKYLAFEHQNG 463 Query: 308 RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS---DNK 364 I L + S +E+ F ++ L+ I + A+ Sbjct: 464 GRRIVLAENFRSRREVLDFTNLVFQQLMDEQVGQIPYDDAAALVPGFPSFHESDAFIPEL 523 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE-----------EDPTLTPRDIIVMVA 413 + S T + + E+ V ++ +++ E+ +T +DI+++ Sbjct: 524 LIYEKEAESTTNLIEDKTEGELHVTAIKIQELIQSQFMIYDKKRREERPVTYQDIVLLTP 583 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 + V +P ++D + ++ I+LL + D+ + ++A+ Sbjct: 584 TRKNNL-----VILDVFKKFGIPLEVNDAQNYFQATEIQTMIALLQIIDNPYQDIPLVAV 638 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 L P++ +TE+ L +R Sbjct: 639 LRSPMV----GLTEDELAEIR--------------------------------------- 655 Query: 534 GYAMESAQGEWQSVLPY-DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 + +++VL Y D G ++ L + L +LN WR + P+ L Sbjct: 656 --LADRTSEFYKAVLTYQDNQKGTVSALSKRVDDFLSELNRWREAARR-LPIPNLLWDIY 712 Query: 593 DM--LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 D + + + + + + + +++ ++ Sbjct: 713 DTTAYLDYVVGLPAGQQRYANLIALIHR-AEKYEKSSFRGLYQFIRFIEKMQEKDKDLAE 771 Query: 651 SQRFLA-GPVNICTLMPMRSIPFKVVCLLG----MNDGVYPRQLAPLGFD---------- 695 A V + T+ + + F VV LL N + ++ Sbjct: 772 PLATPAENAVRVMTVHASKGLEFPVVFLLDTTKFFNYQDFQKRYIFEEQLGAGIQYIDAS 831 Query: 696 --------LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS------------ 735 + + ++ AL A+QKLY+ + Sbjct: 832 ENIKYETIPFQAIKQVRLKKALSEEMRKLYVALTRAEQKLYLVGSYKDRQAAFKAWQAGL 891 Query: 736 IQDNSERFPS-VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 Q + P+ LV + L ++ +H F + Sbjct: 892 TQSQTVLDPALRLVAR--GSLMDWVGLTLIRHPEMEQVFTDASERKMTIHHPARFQIHWW 949 Query: 795 QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQ 854 + + T PE + L L + +P Q Sbjct: 950 NQDQID-------QQLQVQPPTEAVVAPTPSTTAPERL-LNRLD--YQYPYSKATQTTSY 999 Query: 855 VNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE 914 + D + + L + +Q+L + E RF + G Sbjct: 1000 QSVSELKRLYNDPDDQDITLLEWHSADQKLAPQRFRYVETELAKPRFLQEQKPQASSIGS 1059 Query: 915 IFWETQCQEMQQLAD 929 +M L + Sbjct: 1060 ATH--LVMQMLPLTE 1072 >UniRef50_Q0ATK5 DNA helicase/exodeoxyribonuclease V, subunit A n=1 Tax=Maricaulis maris MCS10 RepID=Q0ATK5_MARMM Length = 1183 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 55/506 (10%), Positives = 122/506 (24%), Gaps = 97/506 (19%) Query: 386 VEVLHDRLLAMLEEDP-------------TLTPRDIIVMV--ADIDSYSPFIQAVFGSAP 430 + + + M+ + P DI ++V + I+ Sbjct: 571 AQTVAGEIADMISRGDAVWEEKGGQFTQRPVRPSDIAILVWRRTGGFFEEVIRQ-----L 625 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL----AARFDIT 486 +P A +DR + ++ ++L + + +L P+ A+ I Sbjct: 626 KLAGVPVAGADRMVLRDQTAVKDMLALGRFAMTSGDDLALAEVLRSPLFDPVDPAKAGID 685 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 E+ L L + + R + + + + L Sbjct: 686 EQALYDLARSRTDLKRRGTLWNALFTSEDPRFADARSALSALR----------------- 728 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 L R + R W + + P Sbjct: 729 ----------DQADKSRLYDFFTGFLNARTPTGETR----WARMFARLGEEARDP----- 769 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 Q +A L + + L+ + Q + V + T+ Sbjct: 770 ---------LQEFLARALQHEREEGGALASFIARIEGEDVQIKREMSPDRDEVQVMTVHA 820 Query: 667 MRSIPFKVVCLLGMND----------------GVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 + + V+ L G+ Q D ++ ++ + + Sbjct: 821 SKGLERPVIILPDTTRSPLTGKTTPIFAQTDCGLLWSQRKDDDTDAVAALRQQSENRQLA 880 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS--VLVQELIDYIGQSHYLPGDEALN 768 + L AL A+ +L + G + +L + ++P + ++ Sbjct: 881 EHGRLLYVALTRARDRLIV--CGWRQGQGHPGRIADDSWYTQLAEAWQGEEWMPFETPVS 938 Query: 769 C-DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG-KAHSEFVQPLPF 826 E ++AR PA A + Sbjct: 939 RLVEDAEPGLRFGPAPVALGAVSEAGAGDTSLPAWARLAAPAEGGQILGAAPSSLLADAD 998 Query: 827 TLPETVPLETLQRFWAHPVRAFFQMR 852 + P + A P F+ Sbjct: 999 SEPAVLSP------LADPGGHRFRRG 1018 >UniRef50_C6XFZ3 Double-strand break repair protein AddB n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFZ3_LIBAP Length = 1040 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 71/638 (11%), Positives = 182/638 (28%), Gaps = 109/638 (17%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + + + E + L L+E+ + ++ AD + + Sbjct: 359 VALIEADNEREEAISIAIALRMSLDENKKKS----ALITADRN-----LARRVKLELTRF 409 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 + IS + SLL+ + L+ P+ A+F E+ L Sbjct: 410 GINIDISAGIPLSTTLHSSILTSLLNAIFKLNDFMAIATLVKHPL--AKFGFPEKYLSRA 467 Query: 494 RQWVNE---SGIRWGIDDDNVRELELPATGQ-------HTWRFGLTRMLLGYAMESAQGE 543 + + G + D +++ L L W+ L+ A+ Sbjct: 468 KNALELVALRGNKNSYDIMDLKSLVLDRIATQKNNTHVPHWQSRLSEEDKELAVLLVDHI 527 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 Q + P G+L + +W + L L Sbjct: 528 LQCITPLVTYKTNKNSTCGNL------------------SISDWTKLTVTCLQNVCL--- 566 Query: 604 ETEAAMTLIE-----QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI-SQRFLAG 657 + + + + ++ ++ + D + + +D E + + + Sbjct: 567 DEHRKLPNLWFEEEGKTLSSLFSKIIETGSCIKANAIEWIDIITRLIDGETVKPKIEKSS 626 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 + I + R + F + L G+N+GV+P+ A F + + D + + ++Y+ Sbjct: 627 TLFILGTLESRLLNFDTLILGGLNEGVWPKNTAKNPFLS---RVMQSDLNLKTAEKYIGQ 683 Query: 718 EA----LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 A + + + L Y ++N S +Q L+ G + + C Sbjct: 684 AAHDFEMANGTRHLI--YTRSLRENNIPTIASRWLQRLLVLGGTDFFDNLKKRGQCYL-- 739 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP 833 + + + + P P T Sbjct: 740 ------------------DWTRKLDYTTKQPHY----------KRPKPFPPLEAQPRTYS 771 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD 893 +++ P + + L+++F + PD R + ++ L+++ Sbjct: 772 FSEIKQLINDPYAVYARRILKLDFIPHFKKDPDR-------TDRGTLFHNIITELIKKRI 824 Query: 894 A----------ERLFRRFRAAGDLPYG--AFGEIFWETQCQEMQQLADRVIACRQP---G 938 +++ +LP + + +++ + + Sbjct: 825 NKNTPEINHLMKQIIDSHFEKENLPPHIDIIWRHLFHKISHSFLEHEEKIQSSIEKIFVN 884 Query: 939 QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 ++ + G+ +TG+ ++ + Sbjct: 885 IPAKMAIESIGIHLTGFADRIDLLKSGFVDITDYKTGD 922 >UniRef50_A0Z419 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z419_9GAMM Length = 875 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 97/724 (13%), Positives = 181/724 (25%), Gaps = 147/724 (20%) Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVD---VTPDNLLHNIQSDILELENRAVAGVNIEE 357 A++ + ++ L + D + V ++ + + +L+L +N Sbjct: 113 ATFERWCSEFTAQLDSNAWATRADIYRSLLTVPIESKISIVLCHVLQLPPLTHQVLNHLG 172 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + D +T S + E + ++ T +++ D + Sbjct: 173 LLHQPVAPETELFDPLVT-KKFPSRRAESMAVAKWAAQRHRDNAGST----AIVLLDFNR 227 Query: 418 YSPFIQAVFGSAP-----ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV----SE 468 P ++ LP S P+ + L + + Sbjct: 228 DRPELEYQLRQEFDCLGARYAALPVNFSSGMPLSKTPMFRDALMALRVASAYDSVALLRS 287 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 +VLALL P L D+ L LR+ + T +H + L Sbjct: 288 EVLALLRSPFLHGGEDLDGIALLQLRKACTDL------------------TSEHIDKRDL 329 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 + +A E HL + L R +R WL Sbjct: 330 NHLAETFAPE-----------------------AHLTQVFKTLRTDRST-RGKRLPSRWL 365 Query: 589 PVCRDMLNAFFLPDAETEA--AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 V R +L + P E+ A+ + + + Q LD Sbjct: 366 DVIRSVLRLWQWPGRAALDSLEYQQFERLEVALDELVMQDCITGELSFQQVILLWEQCLD 425 Query: 647 QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR 706 + G V + + + F + + G+ G+ P++ L F + G Sbjct: 426 DRVFQPKTEEGAVQVFGPQEVVGLRFDALWICGLQSGLLPQRPQLLPFLPNWLQRHLGLL 485 Query: 707 SRRDDDRYLFLEALI---SAQQ-KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 + AL+ A ++ SY S + E PS +L Sbjct: 486 NSDSVALEASAVALLNSFRATHGEVRASYA--SEHEGLEILPS--------------HLA 529 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQ 822 A + ++ + H D N G+ +W A Sbjct: 530 RPIASDDSPTQQQAPKHWPEPSPLELLDEGNVVVGD---ADIQWGGGA------------ 574 Query: 823 PLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 + P RA+ RL F L R I Sbjct: 575 ------------SLISNQSNCPFRAWVSHRLG-------PADVAAPVFGLTPAERGNIVH 615 Query: 883 QLLNALVE------------------------QDDAERLFRRFRAAGDLPYGAFGEIFWE 918 L E + + L RR G + Sbjct: 616 DALRFTWEILKDSHSLRAMNATQIESLTRESTERAVQALERRAERRHCNVRKRVGSACLD 675 Query: 919 TQCQEMQQLADRVIACRQPG--------QSMEIDLACNGVQITGWLPQVQPDGLLRWRPS 970 + Q + L + + Q +L + + ++ R Sbjct: 676 LEIQRVAALLNSWLELEAQREGNFSVIEQEDSHELTLGSLILNLRPDRIDQLEGGRQVVI 735 Query: 971 LLSV 974 Sbjct: 736 DYKT 739 >UniRef50_C8RQU8 ATP-dependent DNA helicase II n=3 Tax=Corynebacterium RepID=C8RQU8_CORJE Length = 1205 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 107/882 (12%), Positives = 218/882 (24%), Gaps = 165/882 (18%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFR-DSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 +D +++ + + R + S VG+P+ + + G Sbjct: 277 QDQRRRFRVVMLDEYQDTGHAQRVMLRSLFGDGRAGEGSFSAMAVGDPMQSIYQFRGATA 336 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQS--DILELENRAVAGVNIEEFSR-----SDN 363 L + A LL + ++ +L++ NR S+ Sbjct: 337 SN-LEKFRTDFPNAAGEPAEKLQLLTSWRNPTMVLDMANRVSTWSMERSTESTGRLVSEL 395 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP----------TLTPRDIIVMVA 413 + + ++E++ L D+L + + + P V+V Sbjct: 396 RPRPGATEGESAVAFFDEREQELDWLADKLQSQWRDHQRKLETADDPAKVKPFSAAVLVT 455 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 P + +R +P ++ P + ++L + +L L Sbjct: 456 VNKDAVPIYEK-----LVERGVPADMTAGPGLLYIPEVADVFAMLRVLVDPTDDVALLRL 510 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR-------- 525 L P R++I L L + + R + V + + Q Sbjct: 511 LTGP----RWNIGAADLAVLTRRAEQIAKRGAGEAGAVDDAAMERQRQENIELLRTPGVR 566 Query: 526 -FGLTRMLLGY--AMESAQGEWQSVLPYDESS--GLIAELVGHLASLLMQLNIWRRGLAQ 580 + +L A E + G ++ ++ G+ AE LA L +L + R + Sbjct: 567 DELIEEVLEAIPNATEFSVGLIDALADLTDAEQMGMSAEGSRRLAQLGREL-GYLRRHSL 625 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ--WQAIIAEGLGAQYGDAVPLSLLR 638 + L + + ML + L Sbjct: 626 GKNLPDLVADIEKMLGVRTEVLTRWHRRPEQAIGTSHLDKFAQIVRDVSRTGSATPKALV 685 Query: 639 DELAQRLDQER----ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY-----PRQL 689 + L +E + V I T+ + + + +V + + Y PR Sbjct: 686 EYLLAAQSEEDGLDPGEVQRKDNTVQILTVHKAKGLEWDIVAVPHASRERYGDYSQPRSE 745 Query: 690 A----PLGFDLMSQKPKRGDR--------SRRDDDR-----------------------Y 714 + S + GD + +DR Sbjct: 746 SAWTIKARVLPSSLRGDAGDDPGAYPTLVTDDAEDRSGHTKAYKEFNKQVSRFRAKENDR 805 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE--------- 765 LF A+ +++ L++S + PS+ + L +Y+ QS E Sbjct: 806 LFYVAITRSERVLFVSGSAFKESASKGNDPSICLTLLHEYLEQSGVAANVEHWSGMGMYY 865 Query: 766 ---ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE------------RQSYAR------ 804 D + ++ L ++ + +Y+ S A Sbjct: 866 KDLDTRLDNPDLPLEDKLMLPTPQINGERGDYEEERKERDTVATAGASWPSPAPAMTRPG 925 Query: 805 ------------EWLPAASQAGKAHSEFVQPLPFTLPETV-PLETLQR-FWAHPVRAFFQ 850 E + + P T+ L+ A Sbjct: 926 VAEGAEQVRKEIEAVSQQEEQDGQSRPAPGATADGAPTTLAEAWDLETNLLLEEFSAMDN 985 Query: 851 MRL------QVNFRTEDSEIPDTEPFILEGLS-----------RYQINQQLLNALVEQDD 893 L ++ S D + F L R + +Q Sbjct: 986 AELVVPLNVRMTATEAVSLRKDNQEFALRARRPIPLEPKPYAKRGTAFHNWVEERYKQVS 1045 Query: 894 AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD-RVIACRQPGQSMEIDLACNGVQI 952 LP + + + + G Sbjct: 1046 -------LLDEDQLPGASDATLEDPYLETLKDAFLRSEWADRQPESVEGAYSVTIGGHVF 1098 Query: 953 TGWLPQVQPDGL--------LRWRPSLLSVAQGMQLWLEHLV 986 G + V DG + W+ M L Sbjct: 1099 EGRIDAVFHDGTDPTAGWIVVDWKTGRKPTGADMDAAAMQLA 1140 >UniRef50_B5VVV8 UvrD/REP helicase n=2 Tax=Arthrospira RepID=B5VVV8_SPIMA Length = 1070 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 98/821 (11%), Positives = 222/821 (27%), Gaps = 157/821 (19%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIY 312 +P R R ++ + E L + VG+ + +G D I Sbjct: 335 NPTIQLYYQQRWRSFLVDEFQDTNPIQGEILELLTQTGDLTIVGDKKQSIYGFRRAD-IG 393 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS 372 + + ++ + Q I ++ + + Sbjct: 394 VFNKFRKRIIDHQGDEIILNQSFRTHQKLINQINQVFSPLLGDLRQDLEAVRIDPPSPRE 453 Query: 373 SITFHVCH-------SPQR--EVEVLHDRLLAML-----------EEDPTLTPRDIIVMV 412 ++ V + +R E ++ L ML ++ + P DI ++ Sbjct: 454 TLQVFVIPKTAETDINQRRIAEGNLIAKTLKEMLDNQIPVFDKQTQQLRPIQPGDIAILT 513 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 + + G A A +P A S + SLL ++A Sbjct: 514 RTWEPLDSY-----GEALAAAQIPLAPSGGGNLLETQEAKDAWSLLKFLADPGDDIALVA 568 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 LL P F I++ L + + S + + L + + + + + Sbjct: 569 LLRSPF----FAISDRLLFNVSRQSQLSHKSTSENISWWQILTTASPAE--FAKAIDTLK 622 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 + + + D+ +G A ++ L R LA E + + Sbjct: 623 TLLKQRQIEPPSRLLQIADQLTGYTA--------IIANLPASNRRLADFSGFRELVQILE 674 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 + F + ++ + + + + + Sbjct: 675 QGTDDLFG-----------VVRRLKRLKDKAVTVER----------------------PP 701 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD----------------- 695 + V++ T+ + + + +V + ++ P P+ FD Sbjct: 702 INTSNAVSLMTIFAAKGLEWPMVVVADLSRPS-PNSSVPVYFDPEYGVAIRCKDDDKDLK 760 Query: 696 ---LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 L + R + + + AL ++ + ++ + +L Sbjct: 761 DPVLYNWLKYRNQQREEAEALRILYVALTRSRDYILLTAPQEKGN---------YLDKL- 810 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 +L +P + P + Sbjct: 811 --------------------------YLGLQAANIPITTLEINSDDIIPPVPPSPPPPAI 844 Query: 813 AGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL 872 + + F LP + +L + P R F L +E++ Sbjct: 845 NPPLLTNAMTSGLFELP----VTSLSEYKRCPARFQFMYILGHPGLSEEANQ-------- 892 Query: 873 EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI 932 G+ Q+ L + D F + + A +E ++ Sbjct: 893 -GMIIGQLVHNALEYDIRDIDQLGKFAQNGSNEQSLREAIYLAQEFDNTEEFKRFI---- 947 Query: 933 ACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLL--SVAQGMQLWLEHLVYCAS 990 + + +E+ L GV G + + +L ++ + +QLW S Sbjct: 948 -HPKNQREVELKLDILGVTFNGVADLIGDNWVLDYKTDKVMRPEHHNLQLWAYAKALNCS 1006 Query: 991 GGNGESRLFLRKDGEWRFPP----LAAEQALHYLSQLIEGY 1027 + +LR + F P A +A + ++EGY Sbjct: 1007 EAHIA---YLRHKKCYSFSPEILAKTAHEAESIVRDIVEGY 1044 >UniRef50_A5VHK2 ATP-dependent helicase/nuclease subunit A n=10 Tax=Lactobacillus RepID=ADDA_LACRD Length = 1392 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 55/388 (14%), Positives = 110/388 (28%), Gaps = 84/388 (21%) Query: 385 EVEVLHDRLLAMLEEDP-----------TLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 E ++ R+ M+E + DI+++ I Sbjct: 670 EFRMIGMRIKQMVENQELIFHPEDGQMHPIQYGDIVLLERTKA-----INNSLMEEFNKL 724 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P + D + + +SLL + D+ ++A+L P++ +T + L ++ Sbjct: 725 NIPLTVHDVESYFQATEVRVMMSLLKIIDNPQQDIPLVAVLRSPIV----GLTNQELAFI 780 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R R + YA Sbjct: 781 R--------------------------------LQNRSVDYYAALQTFMSNYQRKALRHQ 808 Query: 554 SGLIAELVGHLAS----LLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETEA 607 S L +E V L L L ++R+ Q + L + + D + Sbjct: 809 SLLTSEQVNALYEKADHFLGLLRVFRQTAQQ-QTLVDLIWQIYDQTGYLDYVGAMPGGHQ 867 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI-SQRFLAGPVNICTLMP 666 + + + +++ + + + A VN+ T+ Sbjct: 868 RQANL-HALYQRAHSYEQSSFKGLYQFIRFIEKMQEHDKDLGVAPTQLTANTVNVMTIHG 926 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPL----------GFDLMSQKPKRGD----------- 705 + + F VV L+ G + + A G M + D Sbjct: 927 SKGLQFPVVFLIDATHG-FNKGAARENAVVDAVAGVGIRYMDDQRVIYDTPQRQAVIEEI 985 Query: 706 -RSRRDDDRYLFLEALISAQQKLYISYI 732 R R +D + AL A+Q+L I+ Sbjct: 986 QRGERAEDLRVLYVALTRAEQRLVITGS 1013 >UniRef50_B0CJK2 Double-strand break repair helicase AddA n=35 Tax=Rhizobiales RepID=B0CJK2_BRUSI Length = 1180 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 92/656 (14%), Positives = 167/656 (25%), Gaps = 124/656 (18%) Query: 386 VEVLHDRLLAMLEEDPTLT-------PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 E + + L+ + PRDI+V+V D + P + A + +P A Sbjct: 561 AEQIAATIRYWLDRGEPIPGQNRKIAPRDIMVLVRKRDQFMPALS----RALKNLSVPVA 616 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 +DR SH ++ ++L + ALL P+ Sbjct: 617 GADRLQLTSHIAIQDLMALGRFVLQPSDDLSLAALLKSPL-------------------- 656 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 +G DDD + L P T L R A Sbjct: 657 -----FGWDDDRLFTLAYPRGAGDTLFEYLYRASRHDA---------------------- 689 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 LA + L+ WR +L+A Sbjct: 690 ----ELAQIHKLLSRWRNMADTMPVF----EFYARVLSADGARRKLLARLGPEAGDIIDE 741 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 L A+ L + L + + V I T+ + + VV L+ Sbjct: 742 FQNYALSAERAGLPGLQAFLETLEAAAPEIKRELDQGRDEVRIMTVHAAKGLEGAVVFLV 801 Query: 679 GMNDGVY--------------------------PRQLAPLGFDLMSQKPKRGDRSRRDDD 712 V+ P GF + + ++ ++ Sbjct: 802 DPGSAVWTGSRAPKLIPYDFQGDGPPVKGFLWQPNSSCQTGFT--AAEIEKLKNRAEEEY 859 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP--GDEALNCD 770 R L + A+ +L I + + LV++ + ++ P G A Sbjct: 860 RRLLYVGMTRAEDRLIICGYRGTRESGETWH--RLVEDALAAKSETFVHPVTGVAARRYR 917 Query: 771 ESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE 830 ++ P + A LP A + P Sbjct: 918 KTPRSFIEINEEDQAGATSLPPLPHDYRQPMKAEPGLPRPLAPSGASALI--EADEEPPL 975 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE 890 + LQ P + ++ E E L + Sbjct: 976 DLSSPVLQPGTGAP-AFALRRGTAIHMLLEYLPDVAPEKREHLAADY------LARIAAD 1028 Query: 891 QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGV 950 DAERL L FG +F E E+ + ID+ Sbjct: 1029 WPDAERLKAWQSVHAILDDPRFGPVFAEGSRGEVAVMG-------------MIDIGGRDH 1075 Query: 951 QITGWLPQVQPDG----LLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRK 1002 ++G + ++ D ++ ++ + + + A L+ + Sbjct: 1076 AVSGQIDRISVDESRVLIVDYKTNRPPPKTLEAVPSAYRAQLALYRELLRPLYPGR 1131 >UniRef50_C8X833 UvrD/REP helicase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X833_NAKMY Length = 676 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 57/430 (13%), Positives = 108/430 (25%), Gaps = 82/430 (19%) Query: 331 PDNLLHNIQSDIL---ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVE 387 P+ + ++ + L + A E CH E Sbjct: 279 PEVTVVRLERNFRSHQRLLDLANVVRPGAEGEHRITLHSDRREGRPARLVRCHDAPAEAR 338 Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 ++ D +L + R+ V++ + + R +P+ Sbjct: 339 IIVDSVLEAHQ--KGRRLREQAVLMR-----AAAHSDLLEVELTARGVPFVKYGGLKFLE 391 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID 507 ++ F++ + L D+ LL I R L + + + +D Sbjct: 392 AAHVKDFVAAVRLLDNPRDEVAWYRLLR-----LHDGIGPARARSLLGSLADPELSADLD 446 Query: 508 DDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567 PA + L+ L S I E L Sbjct: 447 RHAEAVAAAPAMSRVALAASLS-----------------TLADARSRNRIGERARGCLEL 489 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 L L R +W D+ + Q + A Sbjct: 490 LRPLLTARYR--------DWSARLGDL------------ERLVGAADQSPDLAAFVAELT 529 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 S L + + T+ + + + VV +L + DG +P Sbjct: 530 LDPPASTSDLA-----------GPPSQDDDYLVLSTVHSAKGLEWPVVHVLHLVDGSFPS 578 Query: 688 QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR-------SIQDNS 740 +A G +++ LF AL A +L + R +S Sbjct: 579 DMA------------LGTPEGVEEEARLFYVALTRAADELNLYAPLRMPHHRHARDDRHS 626 Query: 741 ERFPSVLVQE 750 S + + Sbjct: 627 MAPLSRFLDD 636 >UniRef50_C9LQY5 ATP-dependent nuclease subunit A n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQY5_9FIRM Length = 1285 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 66/511 (12%), Positives = 131/511 (25%), Gaps = 97/511 (18%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYI- 311 D + F+ + D + + + +LAS + R + Sbjct: 446 DVKQSIYRFRQADPTIFQKKYRSFSSDENAEDRRIDLNRNFRSDAAILASINYIFRQLMS 505 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 L +L+ + D+ G EF P+D Sbjct: 506 EKLLELDYGDREALYPGRHEDS-----------RPAAYAGGAVEVEFIDKVTDENTVPMD 554 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTL----------TPRDIIVMVADIDSYSPF 421 S+ S E ++ ++ A++EE + DI +++ ID +P Sbjct: 555 ESVNDIT--SITFEGRLIAKKIRALMEEKRQVMNKDGTFRSTDYSDIAILLRSIDKKAPA 612 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 + V ++P ++ SLL + D+ +LA+L Sbjct: 613 LLKVLNEE----HIPATADKDDDFIRSMEVQILWSLLKILDNPRQDLPLLAVLRS----F 664 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 + EE LR + Sbjct: 665 LAGLDEEDFARLRLAL---------------------------------------APEED 685 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 W + L L+ L+ WR+ ++ + D ++ Sbjct: 686 SLWDILPRAKGIIPEEKAL--RLSRFLLLYETWRKEARKDGVAPLLRRIIEDTDYLSWVA 743 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 A + + A + D + IS V I Sbjct: 744 GLPNGTAGKSHVLSFYELAKTRDSATVNGLFSFLEYLR--RAQKDFKTISTSAKGNAVQI 801 Query: 662 CTLMPMRSIPFKVVCLL---------GMNDGVYPRQLAPLGFDLMSQK------------ 700 ++ + + F VV L ++ V + LG ++ Sbjct: 802 MSIHKSKGLEFPVVFLADAAKSFNVKDLDRTVIFHREMGLGIHYFDKEHMAHWPSLYWMA 861 Query: 701 -PKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 R + ++ L A+ A+ L I+ Sbjct: 862 IRTAAGREAQAEEARLLYVAMTRARDLLCIT 892 >UniRef50_B2T5W9 UvrD/REP helicase n=37 Tax=Proteobacteria RepID=B2T5W9_BURPP Length = 720 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 39/416 (9%), Positives = 95/416 (22%), Gaps = 68/416 (16%) Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQRE 385 F L + + A + + + N + Sbjct: 312 FDPPAKQVTLERNYRSSAPILAASNAVIELASERYTKNLWTDKASAQRPRLVTVADEADQ 371 Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 + +++L + + + V+ + A R +P+ Sbjct: 372 ARYIVEQVLE--AREQGMKLKSQAVLFR-----AAHHSAALEIELTRRNIPFVKFGGLKF 424 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 ++ +++L ++ + + + + Sbjct: 425 LDSVHVKDVLAVLRWAENPRDRVAGFRV-----VQLLPGVGPATAARV------------ 467 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 L ++ + L + E Sbjct: 468 ----------------------LDEVVACAGSGNPADTAGGALAAFTAPARAQEDWHPFV 505 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 L+ + + E +M+ ++ P E I + + G Sbjct: 506 KLMSSIYGRQTPWPAE----------FEMVRRWYEPHLERNHEDAAIRHADVSQMESIAG 555 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 L+ L + E + + T+ + ++ V +L DG Sbjct: 556 TYASRERFLTELTLDPPDATSDESGVPLIDEDYLILSTIHSAKGQEWRNVFVLNGVDGCI 615 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 P G D++R L A+ A++ L+I R N Sbjct: 616 PS------------DLGTGSEEEIDEERRLLYVAMTRAKEDLHIVVPQRFYVHNQT 659 >UniRef50_C8WFT5 Double-strand break repair protein AddB n=3 Tax=Zymomonas mobilis RepID=C8WFT5_ZYMMN Length = 993 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 114/918 (12%), Positives = 241/918 (26%), Gaps = 172/918 (18%) Query: 80 IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYL 139 P E F + K+M + + + L L D+ +++ A Sbjct: 97 PPLERHFRLTRLVKKVMQKQGRTIAVPEAHRLAEELALTLDQLM----AAEIA------- 145 Query: 140 VYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQ------RF 193 P+ L Q E L + WQA L L+E + + R Sbjct: 146 ---PEQLTQLIDPMAEEELA--RHWQASL--KLLECIITEWPEELKKTGQIESQERRNRL 198 Query: 194 IETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKD 253 ++ L P + G PV + L+ + + Sbjct: 199 LDRLADRWQTQPPSEKPIIAAGAITGSPVSARLLRVISE--------------------- 237 Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 + + + D + + P L S L Sbjct: 238 --------MEGGLVVLPGLDNSMSDEEWQLLGPHERDPDTGIKQPSLES--HPQFQLKLL 287 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS 373 L + ++ D + N + I + A + P + Sbjct: 288 LDRMGVDRKEVIEWDPPKNYHPDNREQAIRHVMAPARYTDRWRSLPEKERAFP------N 341 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 ++ P+ E +V+ L A +EE ++ D + + Sbjct: 342 LSVIETAHPEEEAQVIALALRAAVEEKGQTA----ALVTPDRA-----LAIRVSALLKRF 392 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA--ARFDITEEGLR 491 + S R P + L+SL F + LA+ P++A D+ + +R Sbjct: 393 GIDADDSAGRPLSLTPPGLLLLDLVSLAADHFSAVSFLAIAKHPLVAFGEDRDLWRDHIR 452 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 L + +R G+ G + Sbjct: 453 SLDMILRGPLLRNGL----------------------------------AGITAKIKEAV 478 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 ++ EL+ + + PL + + + R+ N EAA L Sbjct: 479 DNQKADPELLAWWEKTKIPFQALDQQYQSVLPLTKIVKILRETANQIAGEKIWAEAAGHL 538 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PVNICTLMPMRSI 670 I E L A + + + S L Q +D++ + + I L+ R Sbjct: 539 AADLIAEI--ESLAADHNEDMRFSDFAHVLRQLMDKQAVRPMTGGHPRIFIWGLIEARLQ 596 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA-----LISAQQ 725 ++ +N+ V+P + + + G + + + A ++ A++ Sbjct: 597 HADLMIAASLNETVWPPIKEADPWLAPRIRSELGLPGL---ELRIGIAAHDFSSVLGAKK 653 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 L ++ R + + PS L H+ Sbjct: 654 IL-LTRARRDAR--APTMPSRFWLRLEAMAANLHHADNLP-------------------- 690 Query: 786 RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPV 845 Y L P P+ + + + P Sbjct: 691 ----------------YWARQLDEPKGFRPVTRPAPNPPVLDRPKRIAVTRFDSLQSDPY 734 Query: 846 RAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE----RLFRRF 901 + L + P R + +L V++D++ + Sbjct: 735 SYYASNILGLRKLDPVDAEP-------TAAWRGSLIHSILENWVKEDNSRIGRLKPRALA 787 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQS-MEIDLA----CNGVQITGWL 956 + ++ Q + + V G++ ++++ NG+++ G++ Sbjct: 788 FLESINAHIIQKTLWLPRLLQAIDWIEGEVQKNAAEGRTILDVEREGRSQINGIELFGFV 847 Query: 957 PQVQPDGLLRWRPSLLSV 974 ++ G Sbjct: 848 DRIDRMGDGSLAIVDYKT 865 >UniRef50_C7JGX3 Nuclease n=8 Tax=Acetobacter pasteurianus RepID=C7JGX3_ACEP3 Length = 1029 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 72/654 (11%), Positives = 155/654 (23%), Gaps = 94/654 (14%) Query: 379 CHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 Q E + + +E+ + ++ D + A + A + Sbjct: 325 AADQQEEAVAISMIMREAIEK----PAHRVALVTPDR-----VLAARVATELARWGVLAD 375 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF--DITEEGLRYLRQW 496 S + P + + DS+F +L++L P++A F + R L + Sbjct: 376 DSAGSSLVDTPAAVLLRLVAQMVDSKFSPVSLLSVLKHPLVACGFAAGVCRATARLLERA 435 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE---- 552 + + ++ + + + E Sbjct: 436 ILRGPAPPPGFAALCQVVKSALENPNEREKAKLEGGVTADRPFGPVALSVFMERLEFCLE 495 Query: 553 -SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 G + + L L + ++ +E Sbjct: 496 PVLGWELDAAEAGMQIAQDLEQ--HCAPVPDLLAALIATVERLVATDEESASERLWRGEE 553 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG------PVNICTLM 665 + L ++ P +L L L ER++ R V I L Sbjct: 554 GNLLASQLTELMLASEVLPPQPPVVLDGLLTAVLAPERVAMRRGGDPKSLHPRVLIWGLF 613 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD--DRYLFLEALISA 723 R + V L G+++GV+P + + + + G S A +A Sbjct: 614 ESRLQTAETVILGGLSEGVWPPVVDAGPWMSRPMRQRMGLPSPEQAVGQAGHDFFASAAA 673 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 + +S R + + P+ + L ++ + ++ Sbjct: 674 AGTVILSSARRR--EGAPVVPARWLTRLDAFLAGRKGHIPNHPALLWLNKLD-------- 723 Query: 784 HTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAH 843 P P A P P + + ++ + Sbjct: 724 ---QPVGP---------------------AIPVAPPQPMPPVALRPRRLSVTEIETWIRD 759 Query: 844 PVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRA 903 P + + L++ E E D I + L V+ + Sbjct: 760 PYAIYAKHILRLEVLPELEEAAD-------ASDYGMIVHKALERWVKAYGVTWPDNAEKK 812 Query: 904 AGDLPYGAFGEIFWE-TQCQEMQQLADRVIACRQPGQSME-------------------- 942 DL + E R+ + Sbjct: 813 LCDLFSESLQEHVLRPALRAWWAPRLTRIAQWVVQAEEKRRNEHGVPRAILTEIRGRVSI 872 Query: 943 IDLACNGVQITGWLPQVQPDGLLRWRPSLLS------VAQGMQLWLEHLVYCAS 990 +D I G +++ + + W L A+ Sbjct: 873 MDAPGGKFDIVGRADRIELNADGHVIVQDYKTGTLPSAKDVLAGWSPQLPLEAA 926 >UniRef50_A0PZA6 Superfamily I DNA helicase (Rep-like helicase) n=5 Tax=Clostridium RepID=A0PZA6_CLONN Length = 727 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 48/506 (9%), Positives = 133/506 (26%), Gaps = 93/506 (18%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 IK+ L + ++ + E L + VG+ +G G Sbjct: 247 IKNLRTLNGYRKLFKYMLIDEFQDCDGIQIEILKLLNEDNSIFAVGDEDQCIYGFRG--- 303 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 + + F D + ++ ++ A + + ++ N + Sbjct: 304 -------SKPECMVNFHKYFKDGKKLFLSTNYRCPKSIVGASDYLIKNNKMRNDKNFKAN 356 Query: 371 DS---SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 I + + + + + ++ D ++ I + Sbjct: 357 KKDMVEINVRSYKDEREQSDRIAMDITKLMSMGD-YNYEDNAILYRTNVESRSLIDS--- 412 Query: 428 SAPADRYLPYAISDRR-ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 + +P+ + D+ H + + I+ L L E L +++ P I+ Sbjct: 413 --FIRKKIPFKLLDKEYNFFEHFICKDIIAYLKLSIDSSDKESFLRIINKPF----RYIS 466 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + L + + Sbjct: 467 KINLAKVE--------------------------------------------KDNSGYDC 482 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIW-RRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 E+ + + + + + R L+ L + + Sbjct: 483 FDILKENEKIPPFQLKKIDEIKKDIQNLNRMSLSGAINSVLHTLDYYQYLKDYSMKFKLD 542 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PVNICTL 664 + + I +++ + + + +++ D+ + ++ V T+ Sbjct: 543 ISELEEILEEFISASQDY--------TTIITFLAHISEVKDEIKNNKNNEEKNGVIFSTI 594 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 ++ + FK V ++ N+ P D+ + R LF + Sbjct: 595 HGVKGMEFKNVFIINCNENNIPFGKEHEDIDIEEE-------------RRLFYVGVTRTI 641 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQE 750 + L+I + + S ++E Sbjct: 642 ENLWI--CMSNEIKGKNKVASRFIKE 665 >UniRef50_B5RSV7 DEHA2A13530p n=2 Tax=Debaryomyces hansenii RepID=B5RSV7_DEBHA Length = 858 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 67/525 (12%), Positives = 154/525 (29%), Gaps = 75/525 (14%) Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDI-------LELENRAVAGVNIEEFSRS 361 D +L + +Q + F+ P+ L+H IQ +I L + I Sbjct: 303 DMKHLTIAGDPNQSIYEFLGSKPE-LIHKIQDEIPGGEVTQLSINESFRITPEILNAVTE 361 Query: 362 DNKRPLDPLD-----SSIT------FHVCH-SPQREVEVLHDRLLAMLEEDPTL-TPRDI 408 +P D SI H S + E + + ++ E L P D Sbjct: 362 ICLKPAGLFDPAQELRSIRGHGHKPIISMHISNKDEYAFIASEVTRLICESGGLLNPSDF 421 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD-SRFVS 467 ++ I+ + + A + + +L++ Sbjct: 422 AILTRSNKE----IEEISKFLTETYNIKCNRFSSSASWIKSKVHILLDILNVISKGPSSD 477 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 +L ++ +L +F + + L N+ + G++ E Sbjct: 478 FGLLCVIS--ILDRKFG-SSSRVSKLFNVSNKWKVNGGLETRENALEEYIIHELEFLDIQ 534 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL----AQERP 583 + ++ + + + E++ L + + + RR L + + Sbjct: 535 VEE--NQVTVKKKKKSLHDITDIYKIPKYNNEIL-RLKTFMDSIRSVRRDLIQNTQESQN 591 Query: 584 LEEWLPVC------RDMLNAFFLPDAETEAAMTL-----IEQQWQAIIA----------E 622 L ++L P+ + IE+ +++++ + Sbjct: 592 PTNILSSLLRVLSDSELLEYLNSPELSKSRSTKQPDSIDIEKDYKSLLKTYLQSFNKSLK 651 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP--VNICTLMPMRSIPFKVVCLLGM 680 Y + L+ + + + VN+ T+ + + F VV + G Sbjct: 652 YSYECYMEQNSLTKSEKSFVEYFLRSYNDEIPTMDREMVNLSTVHTAKGLEFPVVFIAGA 711 Query: 681 NDGVYPRQLAPLGFD--LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 P+ F L+ + + +S+ LF A A+ LYI G + + Sbjct: 712 -----PQNAKSSSFWDSLLLDRLEPHAQSK----ARLFYVACTRARNLLYI---GTNKRF 759 Query: 739 NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 + PS L + + + + + + + Sbjct: 760 D-TLSPSAF-NSLTPELPDMNSVINAKYTLLESLAQDLHRKVPDR 802 >UniRef50_C1F3E1 Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F3E1_ACIC5 Length = 905 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 91/591 (15%), Positives = 167/591 (28%), Gaps = 115/591 (19%) Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD-------- 432 S + E+E L LE +P + V+ +++ I VF Sbjct: 218 SERAEIEGCAQWLRERLEANPEAR---MAVLCTQVEARRGAIDRVFRQVLKPGSQSILTP 274 Query: 433 --RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 Y + R PV A + L D LL L Sbjct: 275 HTEGRVYEFTLGRPLGQQPVARAALLALRWLRHPLTQADASWLLLSGFLCGG-------- 326 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 E I D + + + Q + Y Sbjct: 327 ------AEERMICARADAAMREQESVAP------------------LLDLQQVLAPTVRY 362 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 + +L + Q + R W + R L A P E ++ Sbjct: 363 RLPDAVRQQLQAGV-----QFADTHGFARRRRAPGAWSELARLALEAMGWPGGEEADSVQ 417 Query: 611 -LIEQQWQAIIAEGLGAQ-YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 +Q+W+ ++ E + +A+ L ++ + L PV + M Sbjct: 418 YQTQQRWEKVLEEVARLDLHEEAMSYEDFMALLERQSMDTLFAPESLDAPVQVMGPMEAA 477 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR-SRRDDDRYLFL---EALISAQ 724 F V LG D +P P ++ + G ++RDDD L E ++ + Sbjct: 478 GQEFDGVWFLGTTDAQWPAAGRPHPLLPLAVQRSAGMPHAQRDDDWQLAQHVTERILKSA 537 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 ++ SY + D R S + + + +E+ + Sbjct: 538 GEVICSYARHN-SDGELRLSS--------LMAGRGQEIVLDTVAISAAESEL-------- 580 Query: 785 TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHP 844 ++Y+ S+A P ++ L+ A P Sbjct: 581 -------ESYEDAGLVSFADGVAPGGAEL-----------------------LKDQAACP 610 Query: 845 VRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAA 904 RAF RL+ E + L+ + R + ++L +++ R+ Sbjct: 611 FRAFASRRLRATELRESQ-------WGLDAMQRGNLLHEVLRRFWTEEEPRRIDGLEALR 663 Query: 905 GDLPYGAFGEIFW---ETQCQEMQQLA--DRVIACRQPGQSMEIDLACNGV 950 + G GE+ E ++QLA DR + + + L Sbjct: 664 QTMLDGQLGEVLRVHTERVFARLRQLAGEDRWMGAYLDAEEQRLRLRLEEW 714 >UniRef50_A8U0G7 Inactivated superfamily I helicase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U0G7_9PROT Length = 1005 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 92/743 (12%), Positives = 174/743 (23%), Gaps = 119/743 (16%) Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 S+ P I SP+ E + + +LE ++ D Sbjct: 327 RPSEPDAPATGAFDGIRRLEAPSPREEAGAIAMLMREVLETPGRTA----ALVTPDRS-- 380 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 + S L S R + L + +LA L P+ Sbjct: 381 ---LARRVASELERWDLTVDDSAGRPLAESAPAAFLRLIGDLAAEQAAPVPLLAALKHPL 437 Query: 479 LAARFDIT--EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 A +R L + V R +E+ R GL + G Sbjct: 438 AAGGQAPDAFRRMVRRLERLVLRGPRPAPGFTGLRRAVEVLEDKHAEARAGLLVWVDG-- 495 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 L G L LL LN + + Sbjct: 496 -----------------------LAGRLGPLLDTLNRPAVAATEMADAHARAAEALAQSD 532 Query: 597 AFFLPDA-ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 D A + + + + + VP L+ + R+ Sbjct: 533 QQSGADRLWRGDAGEALARLFDEMRDALDAL---EPVPGRAWPGLFEALLESRVVRPRWG 589 Query: 656 AG-PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 A ++I + R F V L G+N+G +P AP + + G + +R Sbjct: 590 AHPRLHILGALEARLQRFDRVILGGLNEGTWPADPAPDPWMSRPMRRDFGLPAP---ERR 646 Query: 715 LFLEA----LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 + L A + ++ ++ R + + PS + L + Sbjct: 647 IGLAAHDVSMAFGAPEVVLTRATR--VEGTPTVPSRWLLRLETVARALGAEAEFRSDPAP 704 Query: 771 ESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE 830 + + P P Sbjct: 705 VAWHGQLDRPASVEPGKA------------------------------PLPCPPVHVRPR 734 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE 890 T+ + + + P + L + + P R L+A V Sbjct: 735 TLSVTRIDTWLRDPYSIYASRILDLRALDDLDSDP-------NAAERGNAIHNALDAFVA 787 Query: 891 QDDAE---RLFRRFRAAGDLPYGA------FGEIFWETQCQEMQQLADRVIACRQPGQ-- 939 + +R G + +W + + R+ Sbjct: 788 AYPRDLPPDPLQRLLEYGQASFADHLDRPGVWAFWWPRFERVAAWFVEVERDRRRGLSAT 847 Query: 940 ------SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQG-----------MQLWL 982 + + +TG ++ G + QL L Sbjct: 848 VTEQKGRLAVPGPAGDFTLTGIADRIDRMGDGTYAIVDYKTGGYPSKNDLKNGAAPQLPL 907 Query: 983 EHLVYCASGGNGESRLFLRKDGEWRF----PPLAAEQALHYLSQLIEGYREGMSAPLLVL 1038 E L+ G + WR PP A + +++L+ G+ + Sbjct: 908 EALILAGGGFPDLPVAPVSSLAYWRVGGGDPPGAIDAVESGVAELVAEAEAGLRTLIATF 967 Query: 1039 PESGGAWLKTCYDAQNDAMLDDD 1061 + + + D Sbjct: 968 DDEQTPYHSVPDAGRKPRFNDYA 990 >UniRef50_Q31P33 Putative uncharacterized protein n=2 Tax=Synechococcus elongatus RepID=Q31P33_SYNE7 Length = 865 Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 98/724 (13%), Positives = 212/724 (29%), Gaps = 127/724 (17%) Query: 351 AGVNIEEFSRSDNKRPLDPLDSSIT---FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 E ++ + P I H ++EV + + +L+++ + D Sbjct: 193 QIKLEERSPEPWLQQWIAPNPPKIAEPIAHSYRDREQEVRSVLGHVKQLLQQN--VAQSD 250 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 I ++ AD +Y P +Q + + LP + A + LL+ + F Sbjct: 251 IALLAADDRAYGPLVQQI----GWEYGLPTRMLYEIAISETRLGRWLEDLLTAIAADFDY 306 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 + + P A D + W+ Sbjct: 307 PSGIRVF-SPSFCAALP----------------------DGRQRQLRRDRPQNLAAWQTS 343 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 L + + + + EW + QL W + L + L W Sbjct: 344 LATEFSPWPLAATRTEW-----------------------VGQLRQWLQQLGLRQGLRRW 380 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 + A+ ++QQ + + + + E Q + Sbjct: 381 ---------------PQDLVALNRLQQQLKNLAE-----PASETLTRQQWCQEFEQLIRI 420 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG--- 704 R + G V + + V LG+N+GV+P LA S + + Sbjct: 421 SRTPVQPGRGGVQLDRPEQIVGAQIGHVFYLGLNEGVWPAPLASSSLIDYSDRRQLQRLG 480 Query: 705 ----DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 + + ++A Q S++ + DN E+ PS ++++ + Sbjct: 481 LPLPTAASLVQQAKVQWIGALAATQTAQFSWVRQ--HDNREQLPSAYLEQMG--LRSQIT 536 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF 820 D + +E R+ A T + P Q ++ A G+A Sbjct: 537 PAADSPHSPEEYRRRLLAQSTLVDDGDPIAHSAQQRSQQV--------QARLQGEAVWNG 588 Query: 821 VQPLPFTLP-ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT---EPFILEGLS 876 ++P + + + + P R L + +E S+ PD + + L Sbjct: 589 QLADSISIPTRPLSVTGIIQLGQCPYRWAASKLLNLQTDSERSDDPDAAMTGTLLHKALE 648 Query: 877 -------RYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 + + + + + A L ++ GDL F + +++L Sbjct: 649 LLTPQLKTETLPDREILLAIVETAAAHLAKQRPREGDLRQHPRWTAFQLSYVNLLERLLR 708 Query: 930 RVIACRQPGQSMEIDLACN----GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW---- 981 + + ++ + G+ + G + ++ + ++W Sbjct: 709 SPNFRSPDSEIIAVEQSFEGQWQGLPVRGTIDRIDRTSAGLELIDYKLGSTTQKVWDTDQ 768 Query: 982 -----LEHLVYCASGGNGE---------SRLFLRKDGEWRFPPLAAEQALHYLSQLIEGY 1027 L+ +Y G L +RK + P A + ++L + + Sbjct: 769 KLKLDLQLALYQEVGAAAIAPDQPVAQVRYLHMRKAEASQPKPAEATELEQLAARLKQAF 828 Query: 1028 REGM 1031 G Sbjct: 829 EGGH 832 >UniRef50_D1B4A6 Putative uncharacterized protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B4A6_SULD5 Length = 780 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 59/537 (10%), Positives = 146/537 (27%), Gaps = 87/537 (16%) Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + F + + A + + E + + +L + Sbjct: 282 DRWNNLNFAMGISVKQSAFFQTLSALEKAMRQGEIEDTLRVKRLKIDE--EKLVTCKTVW 339 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 Q+ + + R +L+ + A+ E + ++ + Sbjct: 340 HQKLAPQSAMDFIRSLLSEKEAQKGVFKEALFAFEHFL----------NHAPSLRFEQVI 389 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 L RL G + + ++ R + +K V ++ ND P++ + F Sbjct: 390 KLLLNRLSVLSEDDV-RGGKITVMGVLETRGVAYKGVIVVDFNDEFVPKRSSKDLFLSSD 448 Query: 699 QKPKRGDRSRRDDD--RYLFL-EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 + G ++RD + + F + A + + + N PS + E+ Sbjct: 449 VRAHAGLPTKRDRENLQRYFYHQLFSRATK------VAIAYVKNETAMPSRFLDEMGFDT 502 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 + +A + Sbjct: 503 QRMADEGN--------------------------------------FAPLLWKINAPRTL 524 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT---EPFIL 872 F+ + L+ + + +F+ + S D + Sbjct: 525 YTQAFIDAPYDLKAAPLSATKLKTLLSCQRQFYFRYIAKFKEAKMPSNTIDEQSLGIVLH 584 Query: 873 EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC----QEMQQLA 928 + L + Q LL E L + + + + +G F +++ E E+++ Sbjct: 585 KVLEEAILTQNLLEEKHLFAKIEELLK--KESHNDVWGYFADVWLEKLRPFICNEVKRFE 642 Query: 929 DRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQG----------- 977 D + ++ + G + G + ++ + + Sbjct: 643 DGFLVYKKE---FSHSVLYQGFVLEGQIDRIDRKEDRLY-VIDYKSGKVPTTTEKNLENT 698 Query: 978 --MQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMS 1032 QL L+ A G + + K+G P E+ L + + + + M+ Sbjct: 699 VDFQLLFYSLIAGALGEVHGAYYYDLKEGVLIEEPFLEEK-KVLLEEKLRLFAKPMN 754 >UniRef50_A6WX35 Double-strand break repair helicase AddA n=11 Tax=Brucellaceae RepID=A6WX35_OCHA4 Length = 1180 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 97/691 (14%), Positives = 182/691 (26%), Gaps = 125/691 (18%) Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLT-------PRDIIVMVADIDSYSPFIQAVFGSA 429 H+ R + + + L+ + PRDI+V+V D + P + A Sbjct: 552 HLAAPAVRLADQIAATIRHWLDRGEPIPGQNRRIMPRDIMVLVRKRDQFMPALS----RA 607 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + +P A +DR SH ++ ++L + ++L P+ Sbjct: 608 LKNLSVPVAGADRLRLTSHIAIQDLMALGRFVLQPSDDLSLASVLKSPL----------- 656 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 +G DDD + EL P T L ++ G A Sbjct: 657 --------------FGWDDDRLFELAHPRGSGLTLFERLYQVSRGDA------------- 689 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 LA + L+ WR +L+A Sbjct: 690 -------------ALAEVHKTLSRWRNMADTMPVF----EFYARILSADGARRKLLARLG 732 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 L A+ L + L + + V I T+ + Sbjct: 733 PEAGDIIDEFQNYALSAERAGLPGLQAYLETLEAASPEIKRELDQGRNEVRIMTVHAAKG 792 Query: 670 IPFKVVCLLGMNDGVYPRQLAPL--GFDLMSQKP----------------------KRGD 705 + VV L+ V+ AP FD + P ++ Sbjct: 793 LEGAVVFLVDPGSAVWTGSRAPKLIPFDFSNDSPSVKGYLWQPNAGYQTGFTTAQIEKLK 852 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE 765 ++ R L + A+ +L I + + LV++ + ++ P + Sbjct: 853 TRAEEEYRRLLYVGMTRAEDRLIICGYRGTRESGETWH--RLVEDALATKAETFVHPVLK 910 Query: 766 ALNCDESEAR------VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 + T H F + +P + + L + + ++ Sbjct: 911 VAARRYRNTPRGMVDIAEQDRTEDHALPSFPDEYREPIKPEIGLPRPLAPSGASALIEAD 970 Query: 820 FVQPL----PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI---PDTEPFIL 872 PL P P + ++ + E Sbjct: 971 EEPPLDSFSPVLGPGNGTP-----------AFALRRGTAIHMLLQYLPDVPQDGRETLAR 1019 Query: 873 EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI 932 + L R + + + A G+ GE+ + L R Sbjct: 1020 DYLGRIAADWPETERQIAWQSVRTILDDPTYAPVFAEGSRGEVAIMGTIE----LGGRDH 1075 Query: 933 ACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGG 992 A I + + V I + P + P + L+ E L G Sbjct: 1076 AVSGQID--RISVGEDRVLIIDYKTNRPPPKTIEAVPFAYRA--QLALYRELLAPLYPGR 1131 Query: 993 NGESRLFLRKDGEW-RFPPLAAEQALHYLSQ 1022 E+ L + P + ++AL L Sbjct: 1132 IVETALLFTEGPFLMPLPDVVLDEALQSLKD 1162 >UniRef50_UPI0001BC38AF DNA helicase II / ATP-dependent DNA helicase PcrA n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC38AF Length = 1174 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 44/380 (11%), Positives = 100/380 (26%), Gaps = 78/380 (20%) Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 E+ R+ ++ E+ LT +D ++++ P + + +P + Sbjct: 534 AEIAAMRIKEIMAENEELTYKDFVILLRSGKDAGP----EYVDTLGNMGIPADYASTTGY 589 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 S + I +L + D+ +LA++ T + ++ G R Sbjct: 590 FSAYEVRLIIDVLKVIDNERQEIPLLAVMKSYF----AGFTANEMALIK------GNRRK 639 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 + + E S E Sbjct: 640 KNYYDC--------------------------------------LCEFSKGDGETAKKCR 661 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 + + +R+ E + ++ + + + + Sbjct: 662 KFMNFIGEYRKKAGVMTIRELVSELIYSTGYYDYVGFLLNGSRRKMNINMFILQAEKFEK 721 Query: 626 AQYGDAVPLSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 + D++ E + V I T+ + + F VV +LG +D Sbjct: 722 TSFSGLFNFVRYIDKIRNYDVDFGEAGNAGNDNNYVRIMTIHQSKGLQFPVV-ILGNSDK 780 Query: 684 VYP-----------------------RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + + F K+ +R ++ L AL Sbjct: 781 RFNEEDLKSKIIIDEDFGISMDYVDLKSRRKQKFLFKEIMKKKYEREGTGEEIRLLYVAL 840 Query: 721 ISAQQKLYISYIGRSIQDNS 740 A QKL ++ + S + Sbjct: 841 TRAVQKLVVTGVVSSKKYEE 860 >UniRef50_C5BPK5 Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BPK5_TERTT Length = 909 Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats. Identities = 100/787 (12%), Positives = 198/787 (25%), Gaps = 138/787 (17%) Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 L+ W + L + ++ E + Sbjct: 84 LMTQQQEMLLWETVITSHPDTPPLLNSVATAKNAQDAWRLVCEWALPVDSFETDELLQSH 143 Query: 298 PLLASWGK------LGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 L +W R + + D + + I+ A Sbjct: 144 QLFLAWVAAFHEQCQQRGLLTFSELSGVICDALTHSDPAAAVATWRLPNQIVMYGFDDQA 203 Query: 352 GVNIEEFSR------SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 ++ ++ PQ E+E + + P Sbjct: 204 PALLQLLEALTGCGCQLIHVAEPEPTPQVSLCSFSDPQAELESVATWCYQAIAAQP---V 260 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYL--------P-YAISDRRARQSHPVLEAFIS 456 + I V++ D+ + ++ F + P + +S + PV++A + Sbjct: 261 QQIGVVIPDLSARRAEVERHFNRVFDPHGILPTTPQHAPGFNMSAGQPLAQVPVMQAALQ 320 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 L L +R E ALL P L + ++ L +D + Sbjct: 321 ALQLNRARLELETASALLLSPFLGIQSELAARAL---------------LDVRLREQ--- 362 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 G S Q S + + GL L H L + + Sbjct: 363 -----------------GELSPSRQLLRTSAAEFCDDEGLP--LCEHWYHALDDFDKLAK 403 Query: 577 GLA-QERPLEEWLPVCRDMLNAFFLPDAETEAAMT-LIEQQWQAIIAEGLGAQ-YGDAVP 633 R EWLPV L P T + Q WQ + E + Sbjct: 404 QYGPSARLPSEWLPVFMAQLQCLGWPGDRTLDTLEYQQVQVWQTCLDEFAALDVVTAPMA 463 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 S L + L Q + PV I + +PF + ++G++D +P +P Sbjct: 464 WSEALSLLRRLLQQRSFQPQTRISPVQILGSLEAAGLPFDQLWVMGLDDEAWPPAPSPNP 523 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALI----SAQQKLYISYIGRSIQDNSERFPSVLVQ 749 ++ + + + + L ++ ++ SY D+ + PS LVQ Sbjct: 524 LLPLAVQVAHNTPQSSAEREFRYARNLTQRWLASASQVTFSYAATR--DDKQLQPSPLVQ 581 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 E+ A + + + Sbjct: 582 ---------------AFAQTREAVPLFTAWEQLQWQSREMESIEDTNAGGVAEVQRIRGG 626 Query: 810 ASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 A+ L+ A P +AF + RL+ + E Sbjct: 627 AAI------------------------LRDQAACPFQAFARHRLRASEVPEV-------V 655 Query: 870 FILEGLSRYQINQQLLNALVEQDDAER--LFRRFRAAGDLPYGAFGEIFWETQC------ 921 L+ R + + + + + L + L A + + + Sbjct: 656 LGLDAAERGNLLHHAMEIVWRKLGDQAGLLAQSNERLLALVDEAIADALRDIRRKSFVGF 715 Query: 922 -------QEMQQLADRVIACRQPGQSMEI-------DLACNGVQITGWLPQVQPDGLLRW 967 + + L + + + DL G+ ++ +V Sbjct: 716 RFVELETRRLAGLVCAWLELEKKRAPFTVVFNESRKDLTLAGLPLSVRYDRVDALADGGL 775 Query: 968 RPSLLSV 974 Sbjct: 776 FVIDYKT 782 >UniRef50_C0W6Z3 Possible UvrD/REP helicase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W6Z3_9ACTO Length = 1156 Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats. Identities = 91/695 (13%), Positives = 175/695 (25%), Gaps = 101/695 (14%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 A V+ +++T V S +E + + + Sbjct: 350 PRLAEQEVSGGCQPSETCTVVAGERTAAVTAIVASSACQETAHVARVMRSEHVLH-GTAW 408 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD-RRARQSHPVLEAFISLLSLP--- 461 + V+V + QAV R +P + S ++ P A + Sbjct: 409 DQMAVIVRS----AGAAQAV-ARELRRRGVPLSASSPAVLLRAEPAAAAVTDVARSALAG 463 Query: 462 -----DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 D+ E VL LL P++ ++ LR LR+ + + + D+ VR Sbjct: 464 ELGQDDAPAQREAVLRLLTSPLI----GLSVLDLRRLRRRLRTAFPQQEADEVLVRTACS 519 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQ------GEWQSVLPYDESSGLIAELVGHLASLLMQ 570 + L+ A + V ++ E G + Sbjct: 520 LQLARALLEQLRQDPLVSQARSLERAARIVTEVRAVVQACHDARPQGDEGTGQGRVDAEE 579 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL-GAQYG 629 L E+W + D A A+ A+ Sbjct: 580 L--LWAAWQASGCAEQWRQ-VSLGGDTGSGEDGVLAEAAEHDLDVVTALFKRAEVWAERH 636 Query: 630 DAVPLSLLRDEL--AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 ++ EL V++ T ++VV + G+N +P Sbjct: 637 PGQDAAVFLSELAGEVLPSDSVAPTGVRPAGVSVLTPAAAAGRQWEVVAVTGVNRDQWPD 696 Query: 688 QLAPLGFD---------LMSQKPKRGDRSR------------RDDDRYLFLEALISAQQK 726 + G R R D+R + L AL A ++ Sbjct: 697 LRLRDSLTRAGLLVEAVTDRLPREPGGRRSAQMDRVSARAQVRADERRMLLAALTRATRR 756 Query: 727 LYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 L ++ + E PS E+ G + L + L R Sbjct: 757 LVVTACQ-----DEEHAPSGFFLEVARSAGVQVSDEDGQVLTSPDVGELTLRGLVAELRR 811 Query: 787 MPFD---PQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP------------FTLPET 831 P + +Q L A+ P Sbjct: 812 ATVRGHLPTATEQERQQGRQAAALLASVAQAGIGQADPSSWPHGVATSATALVADGERVR 871 Query: 832 VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ 891 V + P+R F Q + + L + I ++ + Sbjct: 872 VSPSDVDNLSTCPLRWFLQRHGG--------DTGTSGQQRLGN-VVHAIAERAQREGLRG 922 Query: 892 DDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA-----CRQPGQSMEIDLA 946 + L P ++ + + +L + + + +E+DL Sbjct: 923 ESLHELLEAQMPELSDPGTWIEQLARQRAHDIIDRLDSYLASVPGQVLVEKRIDVELDLP 982 Query: 947 CN---------------GVQITGWLPQVQPDGLLR 966 GV++ G + +++ L Sbjct: 983 LPPSEDTDDEPGRDGVIGVRLAGRIDRIEMVEALD 1017 >UniRef50_B9CK49 Putative uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CK49_9ACTN Length = 1037 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 81/606 (13%), Positives = 168/606 (27%), Gaps = 55/606 (9%) Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 +D+ E + V + F PL +T E ++ + + ++ + Sbjct: 242 NDVQEPHDAEVEALLHTIFLPQQTTLPLKSQ-GKVTLLSPAGILAEPALIIEHIQGLIAQ 300 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSA---PADRYLPYAISDRRARQSHPVLEAFIS 456 V Y+P + A +P R+A AF+ Sbjct: 301 G-----------VKSFGIYAPQQNEAWRQLAPRLAAHGIPAKTVMRQAVSDSSCARAFLG 349 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 L+ + L +V A++ ++ + + W + V L Sbjct: 350 LVRAVCK------LKNLCEVWPDASQAELGD--------------MSWWPPREIVDFLFS 389 Query: 517 PATGQHTW-RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 P + T + + +M + + + + +S A V + + ++ Sbjct: 390 PLSFVSTEKAWDIDKMWRKNRILTPDHLLRFLRQASATSKECAATVESILN--GRIEKAL 447 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 L +E D + + +A ++ + Sbjct: 448 HRLLIA--CDEHREDFDDEAYLLISNSLSAIMTVAQALHKLEAKADIASEQKFYEVACQK 505 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP-FKVVCLLGMNDGVYPRQLAPLGF 694 L + S+ ++ V I + MR F V LGM+ Sbjct: 506 SFSLCLNNGAAETVGSKAPVS--VEILSDKSMREPNTFDAVICLGMDSVNTSLPTKDKAS 563 Query: 695 DLMSQKPKRGDR-SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 DL+++K + + + R L SA+ + ++ + S N SV+++EL+ Sbjct: 564 DLLAEKLEGVRPIAPLAEGRRRLYRMLASARTYVSLACVAHSEDSNKTF-ASVVLKELLS 622 Query: 754 YIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQA 813 + L E L D +P S + Sbjct: 623 CYETAEGEFNLPQLTRGEGRLSANLLLGGKTPA-KVDSLPLRPTGSISETLKPFVILPSY 681 Query: 814 GKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE 873 + + + ++ + P + F Q RL+++ + FI Sbjct: 682 RGVEQPQI--------QELSASQIESYLECPYKWFVQRRLKLDRVDAGFSGLEKGTFIHR 733 Query: 874 GLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA 933 L Q L AL D + A LP + + D + Sbjct: 734 VLEL-THMQLLQEALGTSDALSDEYVWQAVATSLPDSRISQDTLAHVRYVLSTQFDALAK 792 Query: 934 CRQPGQ 939 + Sbjct: 793 EQFVAP 798 >UniRef50_Q21J65 DNA helicase/exodeoxyribonuclease V, subunit B n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21J65_SACD2 Length = 935 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 65/610 (10%), Positives = 153/610 (25%), Gaps = 86/610 (14%) Query: 350 VAGVNIEEFSRSDNKRPLDPLDS-SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 + + + + + P++ D S C + E+E + L ++P+ I Sbjct: 191 LQQALVTSATNNVQQLPIEKCDQASAGLIECVDWETEIETIARWAHQTLRQNPSTQ---I 247 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYL----------PYAISDRRARQSHPVLEAFISLL 458 +++ ++ + I+ F + YL PY +S P + + L Sbjct: 248 GIVIPNLQKHRSQIECAFIRQFDNDYLLNPTSSGADKPYELSIGSPLAEEPCIADALLLT 307 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 L + E+ L L+ + L+ L W + Sbjct: 308 QLLHKKLTKEEALDLIRSEFWGQNTEARLLALQGLNDW---------------PMTSVDT 352 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + + + + + + ++ + R Sbjct: 353 IRLTELLSKAEKRIETANDLNKEQFKDGFIEATDEMTTSNRILEAI--------QLYRLA 404 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAE--TEAAMTLIEQ---QWQAIIAEGLGAQYGDAVP 633 A + + W + L P +EQ ++ + + V Sbjct: 405 AHKLDFQHWNGFLKRFLKTLNWPGNRTLNSREYQAVEQFKLILDELLVDQRCFIGSNLVT 464 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L QRL ++ Q+ P+ I + + F + +P P Sbjct: 465 FPAYVAHLRQRLSEKVFQQQTPRKPIQISGTLEAIGLSFDKCWVANTTRSQFPESPQPNA 524 Query: 694 FDLMSQKP----KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 F ++ + R + D L ++ SY ++ + S L+ Sbjct: 525 FLPLALQKAFATPRSSPQKELDYAEQLLTIFSECANEVTFSYSK--TAEDEHQQVSPLL- 581 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 + E ++ +L + S Sbjct: 582 --------------PPMASKKLDEEQLAKNL------------YFDKYNTAS----AYRN 611 Query: 810 ASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 S ++ ++ + L + +P+ A+ RL Sbjct: 612 FSVFSDLCGLPLKHSEASIKIRRGVNALSTYAVNPLYAYLVHRLGAKQPNPV-------Y 664 Query: 870 FILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 + R I +L E + + + E+ + Sbjct: 665 VGISPPQRGNILHNVLETFWEATKNSAALKTKLENQAAFLAELEALISDNVNAELHKHLQ 724 Query: 930 RVIACRQPGQ 939 + + Sbjct: 725 YLPPQLLELE 734 >UniRef50_C6W379 UvrD/REP helicase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W379_DYAFD Length = 932 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 79/677 (11%), Positives = 174/677 (25%), Gaps = 158/677 (23%) Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 L D E + E+ + + + I+ +R + E + + Sbjct: 273 DFLHDYEPAHEIILDRNFRSSKGVTALAETIISRNDRIPKSMISAE-------KQTFSKN 325 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEE------------DPTLTPRDIIVMVADIDSYS 419 + + ++ S E + ++ + + L D +++ + Sbjct: 326 NDVLYNEFVSTVEENGTIAQMIVDLRGTPFKSNVTDPNEPERGLDYSDFAILLRTWSKTA 385 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL----D 475 + + +PY + S ++A + + +E++L L + Sbjct: 386 GIV-----NELEKLDIPYITAGVNQLFSVNEVKAAYGIFQYLNKSISAEELLQLWIQIRN 440 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 + + E L E ++ G+ W F L ++ + Sbjct: 441 SNFASNNLLLGIEYLN-----------------SKFPEKQVDRNGKAIWAFSLQQIYWDF 483 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 + + ++ +G + ++ + Sbjct: 484 L--EKSQINEEAFQSQHIAEIVMYNLGKFSQVINDFEEIYFNSSVPS------------- 528 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 F + I Y + L Sbjct: 529 YHLFS---------------FLQFIRYAAADHYPE--------GWLNNPFRA-------- 557 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR-----D 710 V I T+ + + F VV + G+N P + + P +R + Sbjct: 558 PNAVQIMTIHQAKGLEFPVVFIPGLNKNYMPAKKVGGLTEWHFLNPALIKNQQRYIGSEE 617 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 D+R LF A+ AQ+ L+IS + R S V EL + LP E Sbjct: 618 DERRLFYVAITRAQKFLFISRAP-DENNQLYRKASQFVSELAESDAIVTNLPPFEKNLKI 676 Query: 771 ESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE 830 E+ P + Sbjct: 677 EAS-------------------------------------------------PKKEAVSI 687 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE 890 T+ L+ F+ R ++ S D L + + L E Sbjct: 688 TLNFSVLKDFFECQYRF------KLVSMYNFSYPLDQRMGFGRSLHNTLMEIHKRSKLGE 741 Query: 891 QDDAERLFRRFRAAGDLPYGAFGEIFWET---QCQEMQQLADRVIACRQPGQSMEIDLAC 947 + + + PY I + + + + R + + +E ++ Sbjct: 742 ELSQDDVLDIANGQSHFPYLGKSTILEQMKDLVKERVAEYYKRNKDSFKNIEYVEQEIQL 801 Query: 948 ---NGVQITGWLPQVQP 961 NG+ +TG + ++ Sbjct: 802 NLDNGILVTGKIDLIRR 818 >UniRef50_A9GM05 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GM05_SORC5 Length = 1171 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 72/497 (14%), Positives = 142/497 (28%), Gaps = 64/497 (12%) Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 R+L+ A+ W++ L E ++ ++ L+ R L Sbjct: 512 ERILVDAAVIGGLDRWEARLSGFERELRLSLSRAPEDRDAARIARTLADLSALRAFALPL 571 Query: 589 PVC------RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 R + + ++ A++AE + V L +R L+ Sbjct: 572 LAALPSPGERATFGEWQRRLSALATRALRRPERVLAVLAELAPMAHVGPVDLGEIRLCLS 631 Query: 643 QRLDQERISQRFLAGP-VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 +RL + + + + R F VV + G+ + ++P+++ + + Sbjct: 632 RRLTDLVLPPAARRDGRLFVSPIEGARGRSFDVVFVPGLAERIFPQKVTEDPILRDALRR 691 Query: 702 KRG--------DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 R +R A+ +A+Q+L +SY + + R PS EL+ Sbjct: 692 TIAGGDSGLDTSDDRVARERLALRLAVGAARQRLVVSYPRVDMDQSRPRVPSFYGLELLR 751 Query: 754 YIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY----------- 802 G+ ++ A D + ++ Sbjct: 752 AAEGRLPGFGELERRAEQGGAARIGWPAPARPEDAIDAAEHDLALLETLFSLPEAQTVGT 811 Query: 803 ------------------AREWLPAASQAGKAHSEFVQPLPFTL-----PETVPLETLQR 839 AR W+P + A + + LQ Sbjct: 812 ARYLLNANPHLARALRFRARRWIPGWTSADGLFKPIAEAREALAKHAFGRRSFSPTALQH 871 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFR 899 F A P R F ++ R I + L+ L R ++ +L + Sbjct: 872 FAACPYRFFLYAVHKLAPRPAPEAIEE-----LDPLQRGRLVHDVLY---------EVLV 917 Query: 900 RFRAAGDLPYGAFG-EIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQ 958 R AG LP G + + + ++A R P D V+ Sbjct: 918 ALRDAGKLPLGLPALDEARAELDRALDRVAARYADELAPAIRRVWDDGIASVRADLREWL 977 Query: 959 VQPDGLLRWRPSLLSVA 975 + W P ++ Sbjct: 978 RRAAEDRDWEPIHFELS 994 Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 10/96 (10%), Positives = 26/96 (27%), Gaps = 6/96 (6%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 + + ++E L + RE L +A+ E + Sbjct: 279 PSTSLARLQEHLFDPLTDEAPGLGDEVEILSAPGESRECVELAR--IALREAARGVPFER 336 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 + +++ + Y + A +P + Sbjct: 337 MAILLRAPEQYRAHL----VEALRRAGIPAHFAQGS 368 >UniRef50_B1MZM2 ATP-dependent helicase/nuclease subunit A n=3 Tax=Leuconostoc RepID=ADDA_LEUCK Length = 1236 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 49/423 (11%), Positives = 109/423 (25%), Gaps = 104/423 (24%) Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEV--LHDRLLAMLEED-----------PTLTPR 406 + N + D S F +R+ + L +++L++ + + Sbjct: 524 KQPNVTTSEDEDESQEF-----EKRQAQYAQLANQILSLRDTTIFDRKAEPAGMRPVQYG 578 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 DI ++ Y + +P + + + +L + D+ Sbjct: 579 DIAILTRSKTGYIDLVAT-----LRQAGIPTQVDSVGNYFQTMEVYLMLDVLRVIDNPHQ 633 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 + A+L P+ F +E L +R A +H + Sbjct: 634 DIPLAAILRSPM----FGYSENDLAAVR----------------------LADKKHDYWS 667 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 LT D+ S + +L+ L + + Sbjct: 668 ALT----------------VFAQADQRSQTVIDLIKKWHQL---------AIQNDLVALI 702 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 W + + A+ Q L + Q + Sbjct: 703 WAIFDDTSWLDYVAGMPGGAQRQANLH----ALYDYARTYQENTHAGLFRFIRYIEQLQE 758 Query: 647 QE----RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN--------------------- 681 + Q V I T+ + + F +V L + Sbjct: 759 NDGQLGEAPQEANEQAVRIMTIHASKGLEFPIVFLPEFDKSFNTQDLSGKMLIQKNAGIG 818 Query: 682 -DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 + + P L + + R ++ L AL A+Q++Y+ + ++ Sbjct: 819 LEYLQPEALVAMPTLKKLTVQQALKRQSWSEEMRLLYVALTRAEQQIYVVGTVKLDENEE 878 Query: 741 ERF 743 + Sbjct: 879 NQR 881 >UniRef50_Q4JGZ3 ATP-dependent deoxyribonuclease chain-like protein (Fragment) n=4 Tax=Listeria RepID=Q4JGZ3_LISWE Length = 430 Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 62/467 (13%), Positives = 133/467 (28%), Gaps = 99/467 (21%) Query: 62 FPLPASFIWDMFVRVLPEIPK-----ESAFNKQSMSWKLMTLLPQLL-----EREDFTLL 111 F +P + M L + F+ ++WK++ L + ++ Sbjct: 35 FIVPDQMTFQMETSFLNKESLSGMLGTQIFSFSRLAWKILQETGGLSKTFLSQTGIEMVI 94 Query: 112 RHYLTDDSDKRKLFQLS-------SKAADLFDQYLVYRPDWLAQWETGHL--VEGLGEAQ 162 R D DK K+F + S+ A LF + + +A E + + + Sbjct: 95 RKAALDQKDKLKIFSKATSRKGFYSELAKLFKE-MKQEEVSVADLENSAINMSKSVTNKI 153 Query: 163 AWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGL-PSRVFICGISALPP 221 + +++ E + ++ L L + + I G ++ Sbjct: 154 HDISLIYQKYEELLAGKFLEN-------EDYLRLLADKIIESDYLNQTEIIIDGFTSFSK 206 Query: 222 VYLQALQALGKHIE---IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFR 278 L ++ L + + L P + K L Sbjct: 207 QELTVIEKLMHKCDKVTVSLTLNVP------------EIQKGLEEYSMFKQSTEAYFALL 254 Query: 279 DSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNI 338 + ++ + + N S D + L+D+ + + F + D +H Sbjct: 255 EMAKLNKISVEPDKLFLENKRAKS------DSLAFLADVWGNNKFVTFEEKPQDLAIHQ- 307 Query: 339 QSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 ++ + E+E + + + Sbjct: 308 ----------------------------------------ANNRRAEIEGIAREIRQL-- 325 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 RD+ ++ +I Y + V S +P I +RA HP +E S + Sbjct: 326 TLNGYRYRDMAILTRNISDYDVLCETVMESFD----IPIFIDKKRAMAKHPFIEFIRSSI 381 Query: 459 SLPDSRFVSEDVLALLDVPV---LAARFDITEEGLRYLRQWVNESGI 502 + E + + ++ I L +V E+GI Sbjct: 382 DAILFNWKYEPIFQAVKTEFFFNVSENTSIMRRKADILENYVLENGI 428 >UniRef50_A2TR02 Putative uncharacterized protein n=1 Tax=Dokdonia donghaensis MED134 RepID=A2TR02_9FLAO Length = 896 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 89/676 (13%), Positives = 182/676 (26%), Gaps = 132/676 (19%) Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 L +LE+ +++ D P + A+ I+ P Sbjct: 279 AKTLGTILEKTSQDALSKTAIILGDEALLLPVLNALPTHIHK-----VNITMGIPIGKTP 333 Query: 450 VLEAFISLLSLPDSR----FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 F LLSL + + +DVL +L P+ A T L+ + I Sbjct: 334 TASFFEQLLSLKKNPQTNGYYYKDVLKVLRNPITQALLKETATTLQ-------QEIISKN 386 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 + + L +H + L + + + + E L Sbjct: 387 LIYISTGVLLNTVNQEH--LNIAKTLFLEWNDNPKLAVSNCLQIISDLRTIYDETQNSLQ 444 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 + L + + + L E D+ Sbjct: 445 --VEYLYGFYVAFNKLKTLMEVREHISDI------------------------------- 471 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLAGP-VNICTLMPMRSIPFKVVCLLGMNDGV 684 S + E I + + I ++ R + + V L +N+G+ Sbjct: 472 ---------STFILFYRDIISSETIDLKGDPDQGLQIMGVLESRVLDYDHVILTSVNEGI 522 Query: 685 YPRQLAPL---GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 P + +DL + Y F L A + + Y S S Sbjct: 523 LPSGKSQNSYIPYDLKKLYDLPTYSEKDAVYAYHFYHLLHRAS-TVDLLYTTHSSGLGSS 581 Query: 742 RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQS 801 S ++++ + + + S+ Sbjct: 582 EQ-SRFIRQIEEEGIHNLTKYTVTPASHSTSKKS-------------------------- 614 Query: 802 YAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 Q E V L L + L + +PV + + L ++ E Sbjct: 615 ----------QVIAKTPEVVTKLSQFLKRGISPSALTTYLRNPVLFYERYILGIDSSDEV 664 Query: 862 SEIPD---TEPFILEGLSR-YQ------INQQLLNALVEQDDAERLFRRFRAAG--DLPY 909 E + L Y+ + + +L L++ + E + G + Sbjct: 665 EETVAANTMGTIVHNTLEELYKPHIGIILTEDILKNLIKGIEQEVRNQFKSEYGLTHIQE 724 Query: 910 GAFGEIFWETQCQEMQQLADRVIACRQPGQSM---EIDLACNGVQITGWLPQVQPDGLLR 966 G +I + C+ + R I+ + G ++ ++ + +T + L+ Sbjct: 725 GK-NKIIYAVICRYVHNYLKREISLLKKGDTVIIQAVEDDLRDISLTDTITLRGKVDLVE 783 Query: 967 WRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEG 1026 R L++ +G ++ L L+ + P E+A L + Sbjct: 784 QRNGHLNIIDYK-----------TGKVTQTDLNLKSYEDLLLPEGKFEKAFQVL---MYA 829 Query: 1027 YREGMSAPLLVLPESG 1042 + PL +G Sbjct: 830 FMLHKKKPLQFPVNAG 845 >UniRef50_A0PR95 ATP-dependent DNA helicase n=32 Tax=Mycobacterium RepID=A0PR95_MYCUA Length = 1057 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 97/723 (13%), Positives = 194/723 (26%), Gaps = 117/723 (16%) Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD-RRARQSHPVLE 452 L + + V+V + P + A A A +P +I + P + Sbjct: 371 LRRAHLVDGVPWSQMAVIVRSV----PRVAARLPRALAAAGVPVSIPPIGGSLAEEPAVG 426 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 A +++L+ ++ LAL+ P+ + +R +R + + Sbjct: 427 ALLTVLAATAEGLNADQALALITGPIGR---------VDPVRLRQLRRTLRRAVAGRSPE 477 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 + LL + ++ G + + ++L Sbjct: 478 DFGD---------------LLVATLSEDGRPAVGSAGSNQPPGPQFGPLRRVRAVLAAAT 522 Query: 573 IWRRGLAQERPL--EEWLP--VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 R R + W + L A A +E Sbjct: 523 RCHRAGQDPRYILWAAWHRSGLQNRWLAAIDRGGPAGVQATRNLEAVTALFDITDQYVSR 582 Query: 629 GDAVPLSLLRDELAQ-RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 LS L + +A +L + V + + + +V + G+ DG +P Sbjct: 583 TSGASLSGLLEHVAALQLPRVSEEPVAQNEQVGVLSAHAALGHEWDLVVIAGLQDGSWPN 642 Query: 688 QLAPLGF-----DLMSQKPKRGDRSRRD----DDRYLFLEALISAQQKLYISYIGRSIQD 738 + G L G+ S R ++R L L A+ A+++L ++ + Sbjct: 643 TIPRGGVLATQRLLDELDGVSGNASARAPLLAEERRLLLAAMGRARRQLLVTAVDGDTSG 702 Query: 739 N--SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV----KAHLTCLHTRMPFDPQ 792 PS E+ + ++ + + D Sbjct: 703 GGQQAALPSEFFFEIAQWANGDSQAVAAPPVSAPRVLSAAAVVGRLRGVVCAPDGAVDDA 762 Query: 793 NYQ--PGERQSYAREWLPAASQAGK----AHSEFVQPLPFTLPETVPLETLQRFWAHPVR 846 Q + A+ + A AG S T+ TLQ P+R Sbjct: 763 ARQCAATQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQTLNDCPLR 822 Query: 847 AFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGD 906 + N R + I + L+ A + + L R Sbjct: 823 WLAERHGGTNPRDLRATI-------------GSVLHALI-AEPGASEEQLLAELARVWKL 868 Query: 907 LPYG--AFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG-----------VQIT 953 LP+ F +Q + R + +++ +G +++ Sbjct: 869 LPFEADWFSSNELARHRAMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDDGGAIRLR 928 Query: 954 GWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAA 1013 G + +++ DG R + A+ P++ Sbjct: 929 GRVDRLERDGAGRLVILDIKTAK--------------------------------TPVSK 956 Query: 1014 EQALH--YLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKF 1071 + A L+ EGM + + A A D D AR ++ Sbjct: 957 DDAQQNAQLAMYQLAVAEGMVEAGAEPGGARLVY-PGKSAAAGAAQRDQDPLTPAARDQW 1015 Query: 1072 LQA 1074 Sbjct: 1016 RNL 1018 >UniRef50_Q6G1D2 Putative uncharacterized protein n=1 Tax=Bartonella quintana RepID=Q6G1D2_BARQU Length = 1039 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 117/964 (12%), Positives = 228/964 (23%), Gaps = 163/964 (16%) Query: 126 QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPL-WKALVEYTHQLGQPRW 184 L+ A L D+ A W + A+ WQ L + +V Sbjct: 146 WLAQDLAHLMDEIETE----AANWSKLKDIAPDMVAEWWQITLDFLTIVTQNWPQILKER 201 Query: 185 HRANLYQRFIETLE--SATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTN 242 R+N + + L+ + T + G+S P L+ + Sbjct: 202 QRSNPAEWRNQILKMHAETLYRTQPEKPILAAGVSGSIPAVSDLLKVVASL--------- 252 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS 302 P L + E G+P Sbjct: 253 -----------PKGAVVLPGLDLHMDEDQWNALGTTHEEKKTFDSFDHAANVFGHP---- 297 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 + ++ L L Q + + + + E A + R D Sbjct: 298 -----QYHLKKLLSLMKCQRIHVREIGQQSTIKAKRAALLSEAFRPASTTDRWIQIVRDD 352 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 + +F + + E + L +E+ ++ D + + Sbjct: 353 YENLCADW----SFIEAINEREEALAISVALRNAIEDPQKTA----ALITNDRN-----L 399 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 + + S LL L+LL P Sbjct: 400 ARRVAAELKRFGIEANDSGGIPLAQTLPSTLLRLLLENVFQP-DPIAFLSLLKHP----- 453 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 L L Q + V L + + Y+ ++ + Sbjct: 454 -------LTKLEQNRPRLREMAENFELFVLRKSTGRINLCECDQFLEKWIKTYSHDTFEN 506 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 +E+ L L + L + +E + E ++ F + Sbjct: 507 STLDQQKCEEARLLCYLLKKAVEPLASLITQ-----RKECTINEVAIATVEVFENFGRDE 561 Query: 603 AETEAAMTLIE--QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PV 659 + + E Q + E + Q G L + + ++ + Sbjct: 562 NNSLVNLYQHEAGQALSTFLCELVSDQSGLKFQLREWPAMFSALIATRSVTPSPGGHPRL 621 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 I + R V + G+N+G +P F K +R + L A Sbjct: 622 FIWGTLESRLQTVDTVVIGGLNEGSWPITARNDAFLSRQMKMMLTLEPP---ERRIGLSA 678 Query: 720 ----LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 K+ +S R ++ PS +Q L IG+ Sbjct: 679 HDFQWAMGMNKVVMSRALR--VNHVPSLPSRWLQRLETVIGKQ----------------- 719 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLE 835 Q GE + + + + A P P + Sbjct: 720 -------------VWKQIRTRGEILLHWAKMIDNTNMTACATRPCPIPPLKMRPRHFSVT 766 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL---VEQD 892 + P + + L++ PD R + +L A V+ Sbjct: 767 EIPTLRYDPYAIYAKKILRLKPLKALIHDPD-------AAERGTLYHAILAAFCTQVKNP 819 Query: 893 DAERLFRRFRAAGD------LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEI--- 943 + G I+W + L + + E+ Sbjct: 820 NTANALDVLLNIGRKEFDKLNLPADIEAIWWNSFENFAPFLIQWEQSLEPRKRYAEVVSQ 879 Query: 944 DLACN--GVQITGWLPQVQPDGLLRWRPSLLS------VAQGMQLWLEHLVYCAS----- 990 + GV ++G ++ Q L L + Sbjct: 880 KIPIGTTGVTLSGRADRIDVLPGKMVEIFDFKTSTPPSSKQVRDLLFPQLALETALFMQG 939 Query: 991 ------GGNGESRLFLRKDGEWRFPPLA----------------AEQALHYLSQLIEGYR 1028 + ++ +G+ P + E+A +L LIE Y+ Sbjct: 940 AFTDFQDLTPTNLFYIALNGKGEIAPQSILLKKGKKDIQSAINLGEKAWKHLIALIEYYQ 999 Query: 1029 EGMS 1032 Sbjct: 1000 NPQQ 1003 >UniRef50_Q1LLG5 DNA helicase/exodeoxyribonuclease V, subunit B n=9 Tax=cellular organisms RepID=Q1LLG5_RALME Length = 976 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 60/568 (10%), Positives = 133/568 (23%), Gaps = 96/568 (16%) Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 P + A + + S +L LL P F+ + + + Sbjct: 359 PVRDETGWKLSTTRAAAALMRWFDVLARDGDSAALLDLLKSPFCLPAFEHRGAAIALMER 418 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + + + G L + + + ++ Sbjct: 419 RIRRAVVTGGW-------------------ARLAHLFAERERAAGALVDAETMEASDAEL 459 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF-FLPDAETEAAMTLIEQ 614 I L + L ++PL WL ML+ + A + Sbjct: 460 QIRAAARTLIATLADEAAQWPRGLAQQPLHVWLGRLDAMLDTLDMRVALAADDAGRQLLD 519 Query: 615 QWQAIIAEGLGAQYG-DAVPLSLLRDELAQRLDQERISQRFLAGP--VNICTLMPMRSIP 671 + + R L+ L+ + + I L R Sbjct: 520 ALAKLGDLPDDETGSHATLNQQEFRAMLSALLESVAYKEPSAQSQSRITILPLNGARMRR 579 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR---DDDRYLFLEALISAQQKLY 728 F V ++G +D P A L F + + G R E L++ + Sbjct: 580 FDGVVVVGCDDAQLPSSAAELMFFSNQMRRELGLEDREARFAQQARDLAEVLLNNSD-VV 638 Query: 729 ISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP 788 +++ + S ++ L ++ A Sbjct: 639 LTWQRIGSR-GEPHHVSGWIERLSACCARAGTPIEASATP-------------------- 677 Query: 789 FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAF 848 + P +PE + P + F Sbjct: 678 -------------------ALHDTFAQPAGMPAPVAPERVPERWSAQAYNTLRRCPYQFF 718 Query: 849 FQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL---NALVEQDDAERLFRRFRAAG 905 L ++ S+ LE + ++L + + RR Sbjct: 719 ASRMLGLSGLDTLSDD-------LEKRDIGNLLHRVLLQYHEEIHASGERDSDRRLARLR 771 Query: 906 DLPYGAFGEIFWET-----QCQEMQQLADRVIACRQPGQSM-------EIDLACN----- 948 ++ +FG+ E + ++ +A + + E D + Sbjct: 772 EISDTSFGKQIAEDGNAISYYRRWMEVLPSYVAWQAEREEAGWHWRGGEFDAGVDVAMPD 831 Query: 949 --GVQITGWLPQVQPDGLLRWRPSLLSV 974 +++ G + ++ Sbjct: 832 GVPLRLAGRIDRLDKGPDGAHAVLDYKT 859 >UniRef50_C0EHH1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHH1_9CLOT Length = 1188 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 80/634 (12%), Positives = 163/634 (25%), Gaps = 142/634 (22%) Query: 385 EVEVLHDRLLAMLE-------EDPTLTP---RDIIVMVADIDSYSPFIQAVFGSAPADRY 434 E + ++L+ML ED L P D +++ + V+ Sbjct: 552 EANYIGRKILSMLRNGYPVTGEDGKLRPCTLSDFAILLRSKKDKA----EVYAEQLMHLG 607 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 L + + ++LL + D+ +L++ +L+ + T + L LR Sbjct: 608 LDVWTENTSGYFRSREVSLMLNLLRVIDNPLQDIPLLSV----LLSPLYGFTPDELAELR 663 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 L R Y Sbjct: 664 --------------------------------ILDRRAPLYLC----------------- 674 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 + A GH + L+ R A +E+ + D F + Sbjct: 675 -VTASDSGHCREFVQSLSRLREAAAVT-SVEKLIQKIYD--ETLFYALFGAMESSEQKLA 730 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ-----RFLAGPVNICTLMPMRS 669 + +++ G + G LS + + R + + V I T+ + Sbjct: 731 NLRLLLSYAAGYERGSGRGLSGFLRYIDTAEEANRDFECANIFTENSSAVRIMTMHKSKG 790 Query: 670 IPFKVVCLLGMNDGVY-----------------------PRQLAPLGFDLMSQKPKRGDR 706 + F + + G + P L R Sbjct: 791 LEFPICFVANC-AGRFNQRDLSSVYCLSNTHGFAMKLTVPELLKQYPTLPYLAAQLENKR 849 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQD----------NSERFP--------SV-- 746 + ++ + A+ A++KL ++ + Q ER P S Sbjct: 850 ALLSEEMRVLYVAMTRAREKLILTIAADNPQQLVQKAAVQIVEGERLPFYPLYSAHSYAD 909 Query: 747 -LVQELIDY--IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA 803 L+ L+ + G + + L + + Q + + A Sbjct: 910 WLLMGLLRHPSAGDLRSQADSGLSPYEPQSGDARCPLKVVLDGQEYGEQELEQAQPAPEA 969 Query: 804 REWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE 863 E AA + + L +P + + + + + Sbjct: 970 DEETLAALRQNLGYRYAHAALS-EIPAKLSVTQI-----------AEHSRPASLTRRPQF 1017 Query: 864 IPDTEPFILEGLSRYQINQQLLN---ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQ 920 + L R Q + DD E R R G + + + Sbjct: 1018 ERERG---LTPAERGTATHQFIQFADFARAADDLEAEISRLRENGFIDPQQAASVDRKGL 1074 Query: 921 CQEMQ-QLADRVIACRQPGQSMEIDLACNGVQIT 953 LA R+ A R+ + ++ + +I Sbjct: 1075 ESLFHSPLAQRIRAARRVYRELDFFYDLDASEIF 1108 >UniRef50_A6DAL9 Putative uncharacterized protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DAL9_9PROT Length = 734 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 56/480 (11%), Positives = 134/480 (27%), Gaps = 87/480 (18%) Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF--FLPDAETEAAMTLIEQQWQAIIAEG 623 + ++L + + + +D+ F + E + + + II + Sbjct: 296 NFFIKLKALFEYVTTKDKVAY--EKIKDIYEEFEKLNSNKEILEFLKNLLSNKEKIIVDE 353 Query: 624 LGAQYGDAVPL-----SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + +P L +R G V ++ R + F V ++ Sbjct: 354 EFYKIEKLLPYIQEDKEKFLHFLIERFKNLSFDDV-DGGKVTAMGVLEARGLNFDGVIVV 412 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD---RYLFLEALISAQQKLYISYIGRS 735 N+GV P F S + K +R D + + + +++++ I + Sbjct: 413 DFNEGVVPNISDTDYFLNNSIRKKTSLPTREDKESLQKNYYYNLFLNSKK------IKIA 466 Query: 736 IQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ 795 N E PS + EL F Sbjct: 467 YVKNEENNPSRFLYELG-------------------LNEGENRDFYYSEVLYRFSK---- 503 Query: 796 PGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQV 855 P +R SY + + +L R +F+ LQ+ Sbjct: 504 PKKRFSYDGIEFEV--------------------KNLTPTSLYDLLECKRRYYFKYILQI 543 Query: 856 NFRTEDSEIPDTEPFILEGLSR-----YQINQQLLNALVEQDDAERLFRRFRAAGDLPYG 910 E E + + + + + + + L+ + E+ + Sbjct: 544 K--NEIEEKDNFGTIFHNSIEKVIKEGFNSSDEYFDKLMREILKEKDKKEIFE------- 594 Query: 911 AFGEIFWETQCQEMQQLAD----RVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLR 966 ++++ + R + + E + ++ + + Sbjct: 595 -----IRSKWEDKIKKFCEIDFNRARNYKNVEKFAEYGKKLGDFILNARFDRIDEEFVYD 649 Query: 967 WRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDG-EWRFPPLAAEQALHYLSQLIE 1025 ++ + L+ L Y ++++D E + L+ ++A L +L+E Sbjct: 650 YKTGS-KENNIDKDTLQRLFYNYIFEKPAIFYYIKEDNIEDKENNLSPQEAKKELEKLLE 708 >UniRef50_Q3SMQ4 Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMQ4_THIDA Length = 836 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 88/683 (12%), Positives = 166/683 (24%), Gaps = 126/683 (18%) Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 + G L L+ L + D + ++ L E A + Sbjct: 153 ALGPLSGGEQAFLARCADHAPLTLYEGDADDPVALTLRQAWLATEPPLQARATALATRFA 212 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 D+ IT + E + + A L ++ D ++ Sbjct: 213 DSPVV-----EQITVAPAPHLEAEARAVASWVAAQLRAGRQAL----ALIALDRETARRV 263 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 + + A A + L S F ++L LL P + Sbjct: 264 -----RALLERLDVLVADETGWALSTTVAAAVVDRWLECVASDFPHVELLDLLKSPFVLD 318 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 ++ + L + + G Sbjct: 319 DPAARQDQVLQLELALRRQRVAQG------------------------------------ 342 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ-ERPLEEWLPVCRDMLNAFFL 600 + + + G L + L L R+ A+ PL WL D L+ Sbjct: 343 --------AADIERVARQEFGALPAWLASLFDARQRFARTSAPLALWLQRLADSLDQLAA 394 Query: 601 PDA-ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 E +AA + + A+ + + + R L L+ + P+ Sbjct: 395 RAPLEADAAGARVLETLAALGRDLAQD--SEKYDFNEWRRWLGLALESASFVDAGVDSPI 452 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF--L 717 + +L R F + ++G + P P G + + + G R+ DD L Sbjct: 453 VLTSLPAARGRSFDAIAVIGADARHLPALPTP-GLFSQATRRQLGLRTSADDAADAVTDL 511 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 AL+ L +S+ + D+ S LV L + E + Sbjct: 512 IALLGQGPAL-LSWRAWN--DDEPNPASPLVLRLQALHLAAWSSALPEQGIGEPPA---- 564 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETL 837 A++ G+ LP Sbjct: 565 ------------------------------RASTLPGRCTRPAPVVPAARLPRRYSPTAY 594 Query: 838 QRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL 897 Q P F + L + E + L+ ++L + D Sbjct: 595 QTLLDCPYHFFARAVLGIRELDEADD-------ALDKSDYGNALHRILKRFHDGDPPHDP 647 Query: 898 FRRFRAAGDLPYGAF-------GEIFWETQCQEMQQLADRVIACRQPGQ-------SMEI 943 + F + D + G + Sbjct: 648 AQALALLDACAEAEFAALPAYTAAAWRSKWSAIAPAYVDAWLEWAGEGWRHASSESEFAV 707 Query: 944 DLA---CNGVQITGWLPQVQPDG 963 +A V + G + +V G Sbjct: 708 AVAVAGLGEVTLHGRVDRVDRRG 730 >UniRef50_Q1Q555 Similar to DNA helicase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q555_9BACT Length = 641 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 66/441 (14%), Positives = 121/441 (27%), Gaps = 77/441 (17%) Query: 318 ESSQELDAFVDVTPDNLLHNIQSD-----ILELENRAVAGVNIEEF-SRSDNKRPLDPLD 371 S + + A D + L ++ ++EL N + + Sbjct: 267 ASPERIKALRDDFGVSELQLPENYRCPPLVIELANALIEKNLNRSAGKKPLKAVKQGEGG 326 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 + E E + + + P L D V+ + + G Sbjct: 327 DVVRVFRFDDVDGEAEWIAQDIAK---KTPQLR-TDCAVLARTKK-----LLDLAGRKLE 377 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +P + R+ L ++L L +S + + L I+ E Sbjct: 378 GAGVPVYYAARKDEFKSAPLRMLHAILRLVNSTEDKQSLARL--SKAFYELEGISIELAP 435 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 L + + + L L A E L Sbjct: 436 VLSRASAD------------------------GKDLLRCWLDEVKRRDALEEETLRLLET 471 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 L+ L + +L W Q PD Sbjct: 472 GIKPLLNSL--NYRDFADKLLKWAEACQQTS-----------------RPDENAFNEFDE 512 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + W+ ++AE G+ V L L EL D + V T+ + + Sbjct: 513 EREVWKLLLAEITKKFDGEDVSLHQLLHEL----DLTSKTLPKPPEAVPCFTIHASKGME 568 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS-RRDDDRYLFLEALISAQQKLYIS 730 F V L+G+ + P A K+GD S ++R A+ AQ+ L ++ Sbjct: 569 FGQVYLMGLVEDQLPSWAAV----------KKGDNSLEMQEERRNCFVAITRAQESLTLT 618 Query: 731 YIGRSIQDNSERFPSVLVQEL 751 + + + PS + E+ Sbjct: 619 FSAQ--VFGWPKQPSRFLSEM 637 >UniRef50_C0QYG3 UvrD/REP helicase n=3 Tax=Brachyspira RepID=C0QYG3_BRAHW Length = 1131 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 70/593 (11%), Positives = 164/593 (27%), Gaps = 83/593 (13%) Query: 169 WKALVEYTHQLGQPRWHRANL------YQRFIETLESATTCPPGLPSRVFICGISALPPV 222 ++A++E Q + N+ Y+ I+ ++ + S + I + Sbjct: 293 FRAVLEDLKQCTVSMLNYVNILYNEENYKAVIDFIKETYNHIEKVKSNIGIYSHEDMMYK 352 Query: 223 YLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSEN 282 ++AL+ EI N + +D + L + D + Sbjct: 353 AIEALENDAISKEIR---DNISSLILDEAQDTSILQFDFINLIVFGQREITSNSKTDKKL 409 Query: 283 AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE-----LDAFVDVTPDNLLHN 337 N + ++ ++ + L+ + +D F D+ + Sbjct: 410 MIVGDRKQSIYRFRNADVNAFTNTQENFSNYVRYLKDNYRSNSMLIDFFNDLFKSTV--F 467 Query: 338 IQSDILELENRAVAGVNIEEFSR-SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 + DI + + E S + D +I + + E + + + Sbjct: 468 VNDDINYKDEDDLDYNKKTENKAVSLLIFNNNIEDENIHLYADDKTELEAYAIAEYIKNN 527 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 +D ++ ++++ ++Q A +D +PY I S + + Sbjct: 528 YSDD----YKNTVILLQTFKRLDKYLQ-----ALSDYKIPYYIDGGNKFYSREEIVLIKT 578 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 L R + +L + + + L ++ ++ D ++ Sbjct: 579 FLEYLILR-DHAKLPEILRSELF-------DIDIGNLSDFLFSLYVKNLDIKDYFPKMVY 630 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 ++ + +S + + +L + Sbjct: 631 DENK-----------------------YKEIEDIAKSKSYYNQ-LKTAKEILNNIESKIP 666 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 + +E + + + E + IE+ + I + + Sbjct: 667 MMNANEIIETIC--IDTNFYNYLMTMNDAEISYANIEK-LKKIANDFENQTGN---NIYD 720 Query: 637 LRDELAQRLDQERISQRF--LAGPVNICTLMPMRSIPFKVVCLLGM-------------- 680 L D E S V I T+ + + F V + GM Sbjct: 721 FVLNLKNTNDNEPYSAIPKLSVESVKIMTIHKSKGLEFNNVFVAGMGNYIRSYLSDFDFI 780 Query: 681 NDGVY---PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 D + P + D + +S + R L AL A L +S Sbjct: 781 EDSPFIRLPVRNKHYNIDFSASNTDDNKKSETSEKRRLLYVALTRASNNLILS 833 >UniRef50_Q1K0K3 Putative uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0K3_DESAC Length = 881 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 78/633 (12%), Positives = 164/633 (25%), Gaps = 136/633 (21%) Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP----- 436 E+ LE+ + + V+V +++ +Q +F + P Sbjct: 219 ESEELLAAARWARQCLEQQVGI----VAVVVPELERLQGEVQTIFSRELSRSAYPDRVPM 274 Query: 437 --YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 + +S ++ A ++LL L + + LL P A I E Sbjct: 275 DTFNMSLGYPLADQGMVAAALTLLQL-QDSLDFDQLSYLLRCPWFAG--GIDE------- 324 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 W R+L + + L R+ Sbjct: 325 ---------WQQRALFERQLRADNVLRLSVSDLLYRLRH--------------------- 354 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 + + L+ QL W+ + P +W+ L P + + Q Sbjct: 355 --QPQAPRGMLHLVEQLQRWQGEHDKIAP-ADWVEHLNSFLQQIGWPGDASLDSRG--YQ 409 Query: 615 QWQAIIAE-----GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + A + + L + + + + + I L+ Sbjct: 410 VFAAWQDKVLTPVARLGVVSATMTPGQLVSWVCRLSREILFQPKAQDHRLQIIGLLETAG 469 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK----RGDRSRRDDDRYLFLEALISAQQ 725 + F + L G + V+P L+ F ++ + + D D L LE L A Q Sbjct: 470 LTFDALWLCGAGEQVFPGGLSFNPFLPVALQKQSQMPHSDLFHEADYARLLLERLQHAAQ 529 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 ++ ISY ++ S + +L Sbjct: 530 QMVISYAQN--KEERPCRCSPYLSQLP------------------------------WQQ 557 Query: 786 RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPV 845 D + + E + + ++ +PL L+ P Sbjct: 558 CQETDGV-----DWNGVSLEAIDDCRAPSLSSAQLEEPLSGGTGL------LKEQAQCPF 606 Query: 846 RAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE--------QDDAERL 897 +AF R+ V L R + ++L + + D + Sbjct: 607 KAFIHYRVGVRALDVPQP-------GLTSRRRGDLLHRVLQQVWQCLGSHAGLLDYDDTA 659 Query: 898 FRRFRAAGDL------PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEI-------D 944 R A + + + Q ++ L + + + + Sbjct: 660 LRELIAEQVVAVLDGTRFAGHERALLAVEKQRLESLVLEWLDVERQREPFNVQSVEERQQ 719 Query: 945 LACNGVQITGWLPQVQPDGLLRWRPSLLSVAQG 977 L +++ ++ R Q Sbjct: 720 LQVGPLRLNTIPDRIDMTADGRMIVLDYKTGQI 752 >UniRef50_C6R3Z0 ATP-dependent DNA helicase n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R3Z0_9MICC Length = 1564 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 68/587 (11%), Positives = 146/587 (24%), Gaps = 130/587 (22%) Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEE---------------DPTLTPR----DIIVMV 412 + S + E + +R+ AM + D ++ P +I V+ Sbjct: 476 GRVDLTYHDSDREEAVAIAERIAAMRAQAVREYERAYAAHRSGDGSVRPHLKMPEIAVLA 535 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 P +P S P + +S L + S+ + Sbjct: 536 RVHGQLDPI-----RVECERLGIPVQQVGLGGLLSQPEVVDLVSALRVLADPNRSDALAR 590 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVN--------------ESGIRWGIDDDNVRELELPA 518 LL AR+ + + L W + +D + + L A Sbjct: 591 LL----TGARWRLGAADMLALGDWAQSLVRERERALREQMALRMLAEAEDADAAAINLQA 646 Query: 519 TGQHTWRFGLTRMLLGYAMESA--QGEWQSVLPYDESS--------------GLIAELVG 562 + L L G +S+ ++V + + Sbjct: 647 EHLRAAQERLDETLKGAVEDSSGYASLIEAVENLPQDGADGEPLYGEQYRGRRFSPAALE 706 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM-TLIEQQWQAIIA 621 L + Q+ + R GL+++ + +L+ T+ + + A Sbjct: 707 RLRAFAEQMRVLRAGLSEDLGTLLYEIERTTLLDIELAVRPGTDPLGSRANLDAFHEVAA 766 Query: 622 EGLGAQ---------YGDAVPLSL--------------------LRDELAQRLDQERI-- 650 + D V L + D+E+ Sbjct: 767 AYGMSAPRINAMIYAGSDGVSAEEGDPGARRFLLSSGGVSYVMGFLAWLERADDEEKGLA 826 Query: 651 --SQRFLAGPVNICTLMPMRSIPFKVVCLLGM---------------------------N 681 V + T+ + + + V L G+ + Sbjct: 827 LGVVEPDPNAVQLMTMHAAKGLEWDHVLLPGLCGSATGGQTPNLWQMSANAALPWPLRGD 886 Query: 682 DGVYPRQ-----------LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 P A D +++ +DR L A+ A+ L +S Sbjct: 887 REYLPSILETPEEITAFEKAKDLEDYLAEHKDDAAEHAGMEDRRLMYVAMTRARNLLALS 946 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 +EL++ + ++ +E+ A + + + Sbjct: 947 AYRWKSAAMLPLPVQPFWEELLEMLFNPFVGLDAPSVRFEETMDTPWAAPQLVGMGLSYT 1006 Query: 791 PQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETL 837 N ++ + Q ++ V+P+ V L Sbjct: 1007 MPNPADKRKKVHLNHVRRWVEQLAESKYRLVEPVTLVHGTVVDPSNL 1053 >UniRef50_A6BB03 ATP-dependent DNA helicase rep (Fragment) n=3 Tax=Gammaproteobacteria RepID=A6BB03_VIBPA Length = 362 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 78/261 (29%), Gaps = 23/261 (8%) Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD-----MLN 596 +++ L + +L L + +E + RD L Sbjct: 1 SLFEASFEMGLEQHLSGRGLENLRRFTQWLVAIADQAERGNTVEAVRSLVRDIHYEDWLY 60 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG-DAVPLSLLRDELAQRLDQERISQRFL 655 E M + + I+A+ G Y + L + L R ER + Sbjct: 61 ETSASPKAAEMRMKNVSDLYSWIVADLEGDNYDQEEKTLKEVVQRLTLRDMMERGEEDED 120 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 + V + TL + + F V L+G +G+ P Q + D +++R L Sbjct: 121 SDAVQLMTLHASKGLEFPYVYLIGSEEGILPHQTSI-------------DEDNVEEERRL 167 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFP--SVLVQELIDYIGQSHYLPGDEALNCDESE 773 + AQ++L + Q P S + EL + + ++ +E Sbjct: 168 MYVGITRAQRELTFTMCKERRQFGELIKPTQSRFLDELP--FDDVEWEVNKKPVSQEERM 225 Query: 774 ARVKAHLTCLHTRMPFDPQNY 794 A+ Sbjct: 226 AKGDTQYEDDTPLATMHLVYA 246 >UniRef50_C8WQE1 UvrD/REP helicase n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WQE1_ALIAD Length = 1240 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 82/706 (11%), Positives = 160/706 (22%), Gaps = 136/706 (19%) Query: 385 EVEVLHDRLLAMLEEDP-----------TLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 E + D++ LE L +D+ +++ + V A R Sbjct: 548 EAMWVADQIARALERQERVYDRAAKAYRPLRYQDVAILLRAGGENLNTVVQV----LASR 603 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P + +SLL+ D+ S + A L P + ++++ L Sbjct: 604 GIPAVARSSSGFFRAMEIRWAVSLLTALDNPLDSLALAAALKSPFV----GLSDDDLAAA 659 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R + + + Sbjct: 660 RIACPRGPLWHAVREAARDTEG-------------------------------------- 681 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 L + +L WR P + + R++ +L A Sbjct: 682 ------ARDALRLAVERLERWRGLAHTLAPGDLLREIAREVEIDLYLRAMPRGLARAANL 735 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 +Q + L+++R L + + A V + T+ + + F Sbjct: 736 EQLIRLAQSHAPHAGDLYRFLAMVRG-LEEADVDLGHAHGASADSVAVMTIHGSKGLEFP 794 Query: 674 VVCLLGMNDGVYPRQLAPLGFD---------------------LMSQKPKRGDRSRRDDD 712 V +L + +P L + + R ++ Sbjct: 795 HVYVLCLG-RQFPHNKRTLALHRRLGIGATMCDVQTGVHWRTVPSIAVDQANLEASRAEE 853 Query: 713 RYLFLEALISAQQKLYISY----------IGRSIQDNSERFPSVLVQ------------- 749 + AL A+++L + D P ++ Sbjct: 854 ARVLYVALTRAKERLVLVGHAGKVAKLADAAEGHDDEGRLTPEAFLKGNSYASWILPALM 913 Query: 750 ------ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA 803 L G + D E E V + P P Sbjct: 914 RHPDGAWLRKEAGDARAALLDAPGVRFELEVEVDGRPQGQESGEPRSSLFKAPLPPAEEV 973 Query: 804 REWLPAASQAGKAHSEFVQPLPFTLPETVP-LETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 L Q V+ V L R F + L+ R S Sbjct: 974 ERELRRLWQGPAWRYRAVRVASEQRGSRVSLPSKLT--ATDIRRLFAERELRARGRHAGS 1031 Query: 863 EIPDTEPF---ILEGLSRYQINQQLLNAL-----VEQDDAERLFRRFRAAGDLPYGAFGE 914 + D R + DD R + G L Sbjct: 1032 VLEDPAFVRQSGASPRERGVAFHAFMQRAPMQPYANPDDVRRAAQALLEQGLLDERMASA 1091 Query: 915 IFWETQCQ-EMQQLADRVIACRQPGQSMEIDLACN--------GVQITGWLPQVQPDGLL 965 + + L RV+A + + + V + G + + D Sbjct: 1092 LDPDDVLAFFASPLGRRVLAAGEVYREQPFFYRLDVRAGDAQAPVVVQGVIDCLIRDARG 1151 Query: 966 RWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPL 1011 + Q + A + ++ P + Sbjct: 1152 -YAVIDYKTDQVRDASDLDRLVRAYEPQVATYAAAVREAVGTEPEV 1196 >UniRef50_C8WGH2 ATP-dependent nuclease subunit B-like protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGH2_EGGLE Length = 968 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 70/465 (15%), Positives = 130/465 (27%), Gaps = 52/465 (11%) Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 A + LA L + + L L A D A Sbjct: 371 ERARIAADLARESEAAADALTAL-EAGDADGALAGFEARLRARTDLDPAFRAEQLAAVSC 429 Query: 616 WQAIIAEGLGAQ--YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF- 672 + A A + A+PL + R A +L +P Sbjct: 430 ARRFAAACSRANAVFDGALPLLERMPVSSSARSARDEGARPDA---LFMSLDEAAELPAC 486 Query: 673 --KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR-SRRDDDRYLFLEALISAQQKLYI 729 + L ++ G YP +L G L+ +K G R F AL SA + + Sbjct: 487 SCAALVLCDLDAGSYPVRLVEDGGTLLLEKLGLGRPADALAASRRRFFRALSSACETVVC 546 Query: 730 SYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR--VKAHLTCLHTRM 787 + + N +PSV+ +EL+D ++ D A + + A LH + Sbjct: 547 ERVLNTEDANEA-YPSVMFEELLDCYREADAGEDDRATGLPKPLVAFAMLAGEDALHDNL 605 Query: 788 PFDPQNYQP---GERQSYAREWLPAASQAGKAHSEFVQPLP-------FTLPETVPLETL 837 + QP + + E A + + + V P + L Sbjct: 606 ALVCEGVQPRVGKGGATLSWELSAAGAVSPEQRPRIVLPRSPREGLRGADAALALSPSAL 665 Query: 838 QRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL 897 + + P + F RL+++ + F L + A + D+ L Sbjct: 666 ESYLECPYKWFALRRLRLSEPDAGFGPLEMGSFSHNVL--RSFYEHFREAGHAKVDSATL 723 Query: 898 FRRFRAAGD-------------------LPYGAFGEIFWETQCQEMQQLADRVIACRQPG 938 G+ +P AF + + + DR Sbjct: 724 PEARALLGETFDRHLESQRNLKRSVNPLIPRTAFERAETADLRKRLVRFLDREALLLPGF 783 Query: 939 QSMEIDLACN--------GVQITGWLPQVQPDGLLRWRPSLLSVA 975 + + + G + G + ++ +G + + Sbjct: 784 EPVRFEFDFGSSEPFPYAGCLLRGSVDRIDVNGAGQAVVIDYKGS 828 >UniRef50_D2VUP5 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VUP5_NAEGR Length = 705 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 52/404 (12%), Positives = 121/404 (29%), Gaps = 82/404 (20%) Query: 328 DVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVE 387 + P + ++ + +++ +A S +IT + + E + Sbjct: 362 EDFPSATILKLRRNYRSMKSIVLASN--RFMKTSTENSIETDSQDAITLNNFSTRDGEFQ 419 Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 + +++ + + ++ DI +++ + S ++ +P + + + Sbjct: 420 YIANQI--QILNNKGVSYNDIAILMR-----RSTNTSELESILKNKKIPISKNAKDDT-- 470 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW-GI 506 ++L+ L I +E +W+ + I + GI Sbjct: 471 ----RVMLNLMKLICDGVE------------------IKDEKFTKSMKWIIKHFIYFKGI 508 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 + + + Q T S + + P + + Sbjct: 509 GEKSFEKYLQYLKDQET--------------PSTKVPTKGKAP-------KKDKLEKFIR 547 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 +N GLA +L + + F D G Sbjct: 548 FFTVINELAAGLANTT----FLKLAETIQKKFNWDDPL-----------------IIDGL 586 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 D + S L D L + E + ++ICT+ + +K V + + DGV P Sbjct: 587 GLNDELVTSDLIDSLIS-FNDETYNNSSDGKGIHICTVHRAKGREWKHVFVPEVQDGVMP 645 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 L Q+ ++ +F A+ A++ LY++ Sbjct: 646 LIKKSDPIQLKKQQIV-----HEGEEDRIFYVAITRAKEWLYLT 684 >UniRef50_Q1W555 UvrD/REP family helicase n=1 Tax=Pseudomonas aeruginosa RepID=Q1W555_PSEAE Length = 760 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 63/523 (12%), Positives = 134/523 (25%), Gaps = 93/523 (17%) Query: 294 DVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 VG+ A + G + YL+ E F + T L H + + A + V Sbjct: 246 LVGDEDQAIYDWRGAEPDYLIRGFEQD-----FPEATRYTLPHTF--RFGHMLSIAASQV 298 Query: 354 NIEEFSRSDNKRPLDPLDSSITFHV---CHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV 410 +R+ H E + +RL L +DI V Sbjct: 299 ISCNTNRNPKISISAEGTPRTRIHCLPLALGLADLGEHVAERLT------SGLKLQDIAV 352 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF---VS 467 +V D + R +PY + R P + A + +L L R+ + Sbjct: 353 LVRTYD-----LSVTLELDLHQRGIPYHVYGRPPLMRIPEISALLGVLQLASGRWKTLDA 407 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 + ++ + + + + + + V Sbjct: 408 NQLRYVIKSLMYRPTLYLDKAAINRVVELVVR--------------------QPECLVEA 447 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 + + + + + E + + ++L + Sbjct: 448 IRSTITLQTKDYQANQIRDRADLLEILATATDPQDKVLTVLDRY---------------- 491 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 + + T + QA + + D + +D Sbjct: 492 --LLATEFERNIEKQSPTADQAAAVMANVQAFRLIASRHEG----SIDAFLDSIDPLIDS 545 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + V I ++ + + V + G+ +PR DL + + Sbjct: 546 SAMEP-PTTPHVWISSIHRAKGAQWSRVFVPGVVRSGFPR------DDLSADE------- 591 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP------------SVLVQELIDYI 755 + +R LF A+ A +++I++ S P S + E+ + Sbjct: 592 -IEAERRLFYVAITRAVDEVFIAHPNDLEFQRSLERPDITETHPETSSVSRFLWEMDIAL 650 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE 798 + +E E PF Sbjct: 651 ARHAGAAVEEGRFAALGEVDRPEVANTYFATFPFSKDWRYAKR 693 >UniRef50_Q2FNI4 UvrD/REP helicase n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FNI4_METHJ Length = 1149 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 110/924 (11%), Positives = 226/924 (24%), Gaps = 151/924 (16%) Query: 191 QRFIETLESATTCPPGLPSRVFICGI-----SALPPVYLQALQALGKHIEIHLLFTNPCR 245 I E+ T L V + S + + L + + + Sbjct: 285 DDLIRFREAKTCLIENLEKAVPFFSLYIDKDSRFTASTITFFRDLALVAGYYFDLLHMLK 344 Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGK 305 + D L +L + + + + D + + A G+ Sbjct: 345 R-QANGVDFNDLIQLTREFLQSHQDIVARHIRPRYQYILVDEFQDTDPAQFEIITAIIGE 403 Query: 306 LGRDYIYLLSDLESSQELDAFVDVT-------PDNLLHNIQSDILELENRAVA------- 351 L L + Q + F + +L + + +++ L+ + Sbjct: 404 LQPGTRSLFIVGDPKQSIYLFRNADVTRFKEAQTRILSDCKGNLINLDTSFRSCREVIGC 463 Query: 352 GVNIEEFSRSDNKRPLD-------------PLDSSITFH----------VCHSPQREVEV 388 + + ++P + SIT + + E + Sbjct: 464 VNYLFSRIFASTEKPWEFGYEPIQVCDDRKASPGSITVLLPGKAPKGSERSETKEIEAGM 523 Query: 389 LHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 + D + ++ DI +++ + + +A + + P+ Sbjct: 524 VADLVHQIVSCGSFQITDRDGVMRPAGYGDIAILI----ERRTHLTR-YTTALSRKETPF 578 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 + S + ++LS + S + +L P F ++ + ++ V Sbjct: 579 YVHGGIGFYSRQEIYDIYNILSFLLRPYDSAALFGVLRSPY----FSFSDPLIYHILN-V 633 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 + RW + + E T + P E Sbjct: 634 PGAKRRWSLYEKLRACAERFCTRP-----------------------SEIEPSAEILSCS 670 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 + L WR +E + + R+ E + Sbjct: 671 PADQELILRAARLLESWRNLAGREPVVPLVNRIIRESGILTIYGALEQGEQQAANLTKLL 730 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA----GPVNICTLMPMRSIPFK 673 II Y L ++D + D+ER + L VNI T+ + + F Sbjct: 731 GIIRGRTEGGYYSLFDL--VQDMMISIADEEREGEAALDTLSKTSVNIMTVHAAKGLEFP 788 Query: 674 VVCLLGMN-----------DGVYPRQLAPLGFDLMSQKPKRGDR-----------SRRDD 711 VV L M G +P D + + Sbjct: 789 VVILPDMGSSREGKLGPILSGDHPHLYGVRIPDPDQDFDIKETPVYTALSLIQKEKESAE 848 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQD---NSERFPSVLVQELIDYIGQSHYLPGDEALN 768 + LF A+ L + + V L G +++ Sbjct: 849 RKRLFYVGATRARDHLVLCGKQPDKFYESVDKSNNRIDWVCTLFGITKDIAEEGGVISID 908 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 ++ + + Q + S K P Sbjct: 909 PEDGGKPIDITILTD--PDQLTRMWAQEALPPLTLPDEYAKLSGTRKRGLYSDMPDEKAT 966 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 VP+ + + QV +PD + + + Sbjct: 967 IRPVPVTDIGLLGK--ATGHEETIHQVTIPGGSHLLPD---------EIGTLLHHIFSGK 1015 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEM--QQLADRVIACRQPGQSMEIDLA 946 + + G E F T Q L + Q + Sbjct: 1016 DTKSV-------LVSYGITSPE--AESFCNTLYQRFCSTPLIRDAVRSFQEVSFITYS-- 1064 Query: 947 CNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCAS-----GGNGESRLFLR 1001 +TG + ++ D W L+ VY + G L+ Sbjct: 1065 -GNFPVTGRIDRLIQDSRNEWAVIDYKSGDKTGAELQLNVYRIAAEVLTGQPVRMFLYSM 1123 Query: 1002 KDGEWRFPP-LAAEQALHYLSQLI 1024 K GE+ P L+ E+ L + + Sbjct: 1124 KTGEFTEPRFLSDEEIHVALKRYL 1147 >UniRef50_C4L3Q8 Recombination helicase AddA n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L3Q8_EXISA Length = 1205 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 55/461 (11%), Positives = 122/461 (26%), Gaps = 98/461 (21%) Query: 314 LSDLESSQELDAFVDVTPDN-LLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS 372 + + +D + + +L+ I ++L + V + +E ++ R +P+ + Sbjct: 446 FRQANTGKRIDLSQNFRSRSEVLYGINDLFVQLMDEEVGEIAYDEAAQLVPGREYEPIPA 505 Query: 373 SITFHVCHSPQREV-------EVLHDRLLAMLEEDPTLT-------------PRDIIVMV 412 F + RE+ + R+L ++ D RDI+++V Sbjct: 506 DPEFILVDGASRELSKQEVEGRAIATRILELVSGDEPFKVTDESTGQLRNCEYRDIVILV 565 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 +P + ++LL + D+ + Sbjct: 566 RSKKERV----EQLMDILTQYNIPAYTDSDGGYFQATEIRMILALLKVIDNPLQDIPLAG 621 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 L P+ F + L +R Sbjct: 622 ALRSPM----FRFDDGELARIR-------------------------------------- 639 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 +ES ++++ + EL +L +L+ WR E + Sbjct: 640 ----LESEDSFYEALKAKADDDD---ELGVKCGEMLDRLSRWRTYARNHSLSELIQQLFN 692 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI-- 650 D F + + Y + D L + Sbjct: 693 DTGFYDFSGGLPGGKGRQENLKALYDRALAYERSGYRGLYRFLRVMDRLQDTGEDLSEAR 752 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMN---------DGVYPRQLAPLGFDLMS--- 698 S V I T+ + + F V + + V + + D + Sbjct: 753 SLGDEENVVRIMTVHKSKGLEFPVTIVAQLGKQFNKRDQMQRVIFHKQYGISLDAIDVVT 812 Query: 699 ----------QKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + D + + ++ + AL A++KL + Sbjct: 813 RTKSETFVKEMIRRDLDATMKAEEMRVLYVALTRAKEKLIL 853 >UniRef50_D1VUK5 UvrD/REP helicase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUK5_9FIRM Length = 613 Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats. Identities = 50/455 (10%), Positives = 116/455 (25%), Gaps = 95/455 (20%) Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSD----ILELENRAVAGVNI----------EE 357 + + Q + F PD LL ++ I +E + NI + Sbjct: 233 NIFIVADDDQSIYGFRGAKPDELLKLNETYKDLKIYYMEENFRSSKNIVNISNLFIGQNQ 292 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + + + + + E + D+L + ++ + S Sbjct: 293 NRFKKAICTNNDWKNPVELIKLKNSLDQYEFIRDKLPKLQGS--------CAILYRNNLS 344 Query: 418 YSPFIQAVFGSAPADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 ++ + + I ++ SH ++ L Sbjct: 345 AIGLVE-----FLERNNIDFNIKDNKNKFFSHFIVR----------DIIDIIIFSNDLSN 389 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 L +F L +++ R + Sbjct: 390 LALYQKFY------YKLEGYIS------------------------------KRHIAYLK 413 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 + ++ ++ Y + + LAS L L++ ++ L Sbjct: 414 NKVTDNIFKELMAYPNLPPYYLKNISKLASDFKILKKM--KLSKALSFIQYEMGYNKYLE 471 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 E + + + L L Sbjct: 472 -------ENAKRLGENMNSISEYLFYISLIGENAK-DIDEFIGRLKH-LQFLLRKPNDSN 522 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 + + T+ + + F V ++ + DG P + A D +++R LF Sbjct: 523 INLFLSTIHSSKGLEFTNVFMIDLIDGNIPSKSAIDIL--------PDDTLGLEEERRLF 574 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 A+ ++ L++ Y +N + S + EL Sbjct: 575 YVAMTRTKENLFLIYPYYR--NNIKNEMSRFLIEL 607 >UniRef50_B8I7B7 UvrD/REP helicase n=2 Tax=Clostridium RepID=B8I7B7_CLOCE Length = 708 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 44/512 (8%), Positives = 140/512 (27%), Gaps = 91/512 (17%) Query: 250 DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD 309 D Y + + S + + +D + + + G + Sbjct: 224 DWYKKRYTYIQVDEGQDLSNIQFAILKLLSGPDGNIFIVADDD-------QSIYRFRGAE 276 Query: 310 YIYLLSDLESSQELDAFV-DVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 Y+L L F + + L +I++L ++ + + K Sbjct: 277 PQYILDMSSEFNNLKLFRLENNYRSSL-----NIVDLTSKFIMKNDKRYLKSHKTKNKRA 331 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF-G 427 + + +++ ++ +L + +++ I ++ + + ++ Sbjct: 332 DDPF---ILSVENESGQSDIVLKKISELLTGNRSIS---IGILYRN------NLSSILVA 379 Query: 428 SAPADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 + + I +R H +++ + L + +E + I+ Sbjct: 380 DKLQRNSISFRIRQNRLFFFRHWLVQEVCAFLMFSLDGYDTESFTKIC----FRMNRFIS 435 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + L E Sbjct: 436 KTMLEC-----------------------------------------ALQGEERDNVIDR 454 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 ++ + + L L E++ L + + + Sbjct: 455 IINNHDLKPFQLTAMRDLKGEFASLAK-----KNPWSALEYIKNDFRYLESVKEYSSISG 509 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + + + + G+ + EL + + + + + + TL Sbjct: 510 QSFDYFNRLFGIL--HGISVDCPTISAFLVRLQELEKIFEAGGVQNDWEKNQITLSTLHS 567 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + + V ++ M + P + + ++ +++R LF + A++ Sbjct: 568 SKGLEYDSVFMIDMINSEIPG----------DKVLENSEKITLEEERRLFYVGMTRAKKD 617 Query: 727 LYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 LY+ ++ + PS+ + E++ + + Sbjct: 618 LYLLNPC--TLNDEKFMPSIFINEVVQLLQKD 647 >UniRef50_A8UFJ2 Putative uncharacterized protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UFJ2_9FLAO Length = 919 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 94/829 (11%), Positives = 209/829 (25%), Gaps = 177/829 (21%) Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSEN- 282 L++ + K +I L N Y + + L + + E +N Sbjct: 90 LESFDSFSKWAQILLQDFNEIDRY---LIPQEQIFDYLNAIKELNHWSLEATQTELIKNH 146 Query: 283 -AGQLFNSDGEQDVGNPLLASW-GKLG---RDYIYLLSDL--ESSQELDAFV------DV 329 D LL + G G R+ L ++ ++ F+ + Sbjct: 147 LKFWKRLKDYYLTFTESLLQNKKGYQGLIYREAAENLEAYIESNADKIHVFLGFNALNES 206 Query: 330 TPDNLLHNIQSDILEL---------ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCH 380 + +Q+D+ + E+ +S K + + IT H C+ Sbjct: 207 ESRIIQGLLQNDLAHIYWDIDKTFIEDPIHDAGLFTRNHKSKWKYFKNEPFNWITSHYCN 266 Query: 381 SPQREVEVL------HDRLLAMLEE--DPTLTPRDIIVMVADIDSYSPFIQAV---FGSA 429 + EV + + +LE+ + V++ + + P + ++ Sbjct: 267 KKKTEVIGIPKLIGQAKYIGQLLEDISKTNKNLSSVAVVLGEENLLIPVLNSIPKAVTQL 326 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF-----D 484 LP + H ++ F +DV+++L P + F + Sbjct: 327 NVTMGLPLQFVPLASLFEH-----LYAIHKNNPQNFYYKDVISILSHPSIYPLFKTESKN 381 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 I+ E + Y+++ + N EL +W L + + Sbjct: 382 ISGEIIDYIQKNNLVYITVENLKKTNNIHNELLDLLFKSWEDNSKVALKSCS----DLIF 437 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 + +D S + + +L L L + + + Sbjct: 438 KMKANFDNSKKKNSLELEYLYRF-NSLFNQLNELNNNHKYLNNVSILHTIYKELLSL--- 493 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 + + + I + Sbjct: 494 -------------------------ETLDFK-----------------GEPLEGLQIMGM 511 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR---YLFLEALI 721 + R + F+ V + +N+G+ P F K + + ++ D Y F L Sbjct: 512 LESRVLDFETVIISSVNEGILPSGKTNNSFIPFDVKVENNLPTYKEKDAVYTYHFYRLLQ 571 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 A+ + E+ S + +L I H + + Sbjct: 572 RAKNVYILYNTEVDTLKGGEK--SRFITQL--EIEGIHKIKHITISPEVPIIESPLKQIP 627 Query: 782 CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFW 841 + + + +L + Sbjct: 628 K----------------------------------TPLVTEKIKALALKGFSPSSLTNYI 653 Query: 842 AHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRF 901 +P+ +F+ L V + E + L L + + L Sbjct: 654 RNPIDFYFEKILGVKEFEDVEENIAANTL-------GSVIHNSLEDLYKPLEGSFLTVEH 706 Query: 902 RA--------------AGDLPYGAFGE----IFWETQCQEMQQLADRVIACR-------- 935 G G F + I +E + + I Sbjct: 707 LKTFKHQIKQIVTKHFKGLYKDGDFSKGKNLIIFEIAQRYISNFITSEIESLNNGNQIKI 766 Query: 936 -QPGQSMEIDLACNG----VQITGWLPQVQPDGLLRWRPSLLSVAQGMQ 979 ID+ +G +++ G + ++ + R + Q Sbjct: 767 IAIEADETIDIEIDGLVFPIKLNGKVDRIDELNGVT-RVIDYKSGKVEQ 814 >UniRef50_C1F7R1 ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7R1_ACIC5 Length = 943 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 62/193 (32%), Gaps = 20/193 (10%) Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 R L E + D + E + + + AQ Sbjct: 606 AAAFRKPGDPATLPELIKFLIDRSGYIRALEEEATPEAFSRIENLKELANAAQDAQERGE 665 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 L+ D A D ++ V + TL + + F +V L GM +G++P Sbjct: 666 -TLNEFLDHAALVSDTDQFDADAR---VTLMTLHAAKGLEFPMVVLAGMEEGLFPHSRT- 720 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF----PSVL 747 D ++ +++R L L A L ++ + ++ PS Sbjct: 721 -----------LTDPNQMEEERRLCYVGLTRAMDSLILTRARYRRRYGNDMPEASTPSRF 769 Query: 748 VQELIDYIGQSHY 760 ++E+ ++ ++ Sbjct: 770 LEEIPAHLLENLG 782 Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 91/312 (29%), Gaps = 25/312 (8%) Query: 257 LAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLS 315 + R + ++ + E L S VG+ + + G D +L Sbjct: 212 RERYNRRYQYLLIDEYQDTNRPQYELMKLLAGSRHNVCVVGDEDQSIYSWRGADIRNILE 271 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLDPLDS 372 F P+ ++ + + A A V+ E + + S Sbjct: 272 ----------FEKDFPNAQTIRLEQNYRSTQVILEAAGAVVSRNEQRKGKSLWTSREGGS 321 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEE-DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 I F+ + E + D + L + + V+ + A Sbjct: 322 LIGFYEAPDGENEALFIADSIQKYLRKAGESAEQPRAAVLYRTNSQ-----SRLVEEALR 376 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 + Y + + ++ +S L L + S + +++ P I + + Sbjct: 377 RYGIRYTMVGGFSFYERAEIKDLLSYLKLVQNPNDSIALQRIVNTPA----RGIGKTTME 432 Query: 492 YLRQWVNESGIR-WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 L + E+G W +RE LP+ + + A+ + + Sbjct: 433 TLERIALETGTSTWNGIVRALREKLLPSRALVALDTFVRLIEDARALLAPDFAEKLAADV 492 Query: 551 DESSGLIAELVG 562 SG +++ Sbjct: 493 AAESGEMSDAAE 504 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P07648 Exodeoxyribonuclease V gamma chain n=185 Tax=cel... 821 0.0 UniRef50_A6FE97 Putative exodeoxyribonuclease V n=1 Tax=Moritell... 727 0.0 UniRef50_C4K849 Exonuclease V, gamma chain with recB and recD: 5... 725 0.0 UniRef50_D0ICS0 Exodeoxyribonuclease V gamma chain n=1 Tax=Grimo... 724 0.0 UniRef50_B6EGE9 Exodeoxyribonuclease V gamma chain n=1 Tax=Aliiv... 707 0.0 UniRef50_Q2BKD9 Exodeoxyribonuclease V, 125 kDa subunit n=2 Tax=... 696 0.0 UniRef50_A1SUW0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ps... 696 0.0 UniRef50_C9PLM5 Exodeoxyribonuclease V gamma chain n=5 Tax=Gamma... 689 0.0 UniRef50_A5GC93 DNA helicase/exodeoxyribonuclease V, gamma subun... 668 0.0 UniRef50_A4SSU8 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ae... 664 0.0 UniRef50_Q3IJ13 Exonuclease V, gamma chain with recB and recD: 5... 649 0.0 UniRef50_C4L7B2 Exodeoxyribonuclease V, gamma subunit n=1 Tax=To... 648 0.0 UniRef50_B8CMV5 Exodeoxyribonuclease V, RecC subunit n=1 Tax=She... 646 0.0 UniRef50_A3QEU7 Exodeoxyribonuclease V, gamma subunit n=4 Tax=Sh... 644 0.0 UniRef50_A6W0B0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ma... 641 0.0 UniRef50_A1AQY6 DNA helicase/exodeoxyribonuclease V, gamma subun... 636 e-180 UniRef50_Q3ASJ4 DNA helicase/exodeoxyribonuclease V, gamma subun... 634 e-180 UniRef50_A1S6U9 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Sh... 634 e-180 UniRef50_Q1LST9 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ba... 633 e-180 UniRef50_Q2LTC9 Exodeoxyribonuclease V gamma chain n=2 Tax=Bacte... 630 e-178 UniRef50_Q080D9 Exodeoxyribonuclease V, gamma subunit n=6 Tax=Sh... 629 e-178 UniRef50_Q15V11 DNA helicase/exodeoxyribonuclease V, gamma subun... 625 e-177 UniRef50_Q65UM5 RecC protein n=9 Tax=Gammaproteobacteria RepID=Q... 625 e-177 UniRef50_B8E565 Exodeoxyribonuclease V, gamma subunit n=8 Tax=Sh... 619 e-175 UniRef50_A8ZX08 Exodeoxyribonuclease V, gamma subunit n=1 Tax=De... 618 e-175 UniRef50_Q12LP5 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ba... 611 e-173 UniRef50_C0N788 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Me... 610 e-172 UniRef50_P44945 Exodeoxyribonuclease V gamma chain n=21 Tax=Haem... 607 e-172 UniRef50_Q3B473 DNA helicase/exodeoxyribonuclease V, gamma subun... 600 e-169 UniRef50_Q9CM76 RecC n=1 Tax=Pasteurella multocida RepID=Q9CM76_... 598 e-169 UniRef50_Q7NQR0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ch... 596 e-168 UniRef50_Q1N2R1 Exonuclease V gamma subunit n=1 Tax=Bermanella m... 571 e-161 UniRef50_Q2SQD5 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ha... 567 e-160 UniRef50_B8FB93 Exodeoxyribonuclease V, gamma subunit n=1 Tax=De... 564 e-159 UniRef50_A4JS85 DNA helicase/exodeoxyribonuclease V, gamma subun... 561 e-158 UniRef50_B9CWC7 Exodeoxyribonuclease V gamma chain n=2 Tax=Actin... 560 e-157 UniRef50_A6VQ90 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ac... 560 e-157 UniRef50_A3JIN1 Exodeoxyribonuclease V gamma chain n=2 Tax=cellu... 559 e-157 UniRef50_D2BZV3 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ga... 558 e-157 UniRef50_Q7VRF1 Exonuclease V, subunit n=2 Tax=Candidatus Blochm... 557 e-157 UniRef50_C0QI08 RecC n=1 Tax=Desulfobacterium autotrophicum HRM2... 555 e-156 UniRef50_B0BTG3 Exodeoxyribonuclease V, gamma subunit n=8 Tax=Pa... 553 e-155 UniRef50_A1TWK1 DNA helicase/exodeoxyribonuclease V, gamma subun... 549 e-154 UniRef50_C1DMH2 Exodeoxyribonuclease V, gamma subunit n=18 Tax=G... 548 e-154 UniRef50_C6MAC3 Exodeoxyribonuclease V, gamma subunit n=3 Tax=Ne... 548 e-154 UniRef50_C7LVF8 Exodeoxyribonuclease V, gamma subunit n=1 Tax=De... 543 e-152 UniRef50_A1KVC5 Exodeoxyribonuclease V n=23 Tax=Neisseria RepID=... 541 e-152 UniRef50_D0KY94 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ha... 541 e-152 UniRef50_C5S7Q0 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Al... 538 e-151 UniRef50_A4VRQ6 Exodeoxyribonuclease V gamma chain n=1 Tax=Pseud... 536 e-150 UniRef50_Q5QUQ7 Exonuclease V gamma subunit n=2 Tax=Idiomarina R... 535 e-150 UniRef50_Q0VNI2 Exodeoxyribonuclease V gamma chain n=3 Tax=Gamma... 531 e-149 UniRef50_C1D6T7 RecC n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 529 e-148 UniRef50_C5JAU6 DNA helicase/exodeoxyribonuclease V, gamma subun... 527 e-148 UniRef50_C8R0F3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=De... 526 e-147 UniRef50_Q1QYD4 DNA helicase/exodeoxyribonuclease V, gamma subun... 526 e-147 UniRef50_C5TL47 Exodeoxyribonuclease V, gamma subunit n=3 Tax=Ne... 524 e-147 UniRef50_Q60AZ6 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Me... 513 e-143 UniRef50_C7I4N7 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Th... 510 e-142 UniRef50_D0IXL5 Exodeoxyribonuclease V, gamma subunit n=4 Tax=Co... 505 e-141 UniRef50_C3X2X1 Exodeoxyribonuclease V n=2 Tax=Oxalobacter formi... 502 e-140 UniRef50_P57528 Exodeoxyribonuclease V gamma chain n=4 Tax=Buchn... 501 e-140 UniRef50_C4ZM87 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Th... 499 e-139 UniRef50_C1SHH5 Exodeoxyribonuclease V, gamma subunit n=1 Tax=De... 499 e-139 UniRef50_Q480N8 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Co... 495 e-138 UniRef50_Q1NSB7 Exodeoxyribonuclease V, RecC subunit n=3 Tax=Pro... 489 e-136 UniRef50_Q6ANK2 Related to exodeoxyribonuclease V, gamma chain n... 486 e-135 UniRef50_B5JRL4 Exodeoxyribonuclease V, gamma subunit n=1 Tax=ga... 485 e-135 UniRef50_B1XZ24 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Le... 482 e-134 UniRef50_B5JHV1 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ve... 480 e-133 UniRef50_A1SDB1 DNA helicase/exodeoxyribonuclease V, gamma subun... 479 e-133 UniRef50_A1KCB8 DNA helicase, ATP-dependent dsDNA/ssDNA exonucle... 478 e-133 UniRef50_UPI0000E0F593 exodeoxyribonuclease V, gamma subunit n=1... 469 e-130 UniRef50_B5EPU5 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Ac... 467 e-129 UniRef50_C0ZQ87 Exodeoxyribonuclease V gamma chain n=6 Tax=Coryn... 466 e-129 UniRef50_B4RTM0 Exodeoxyribonuclease V, gamma subunit n=3 Tax=Al... 465 e-129 UniRef50_D1N1Q2 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Vi... 464 e-129 UniRef50_A4B914 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Re... 463 e-128 UniRef50_B0TXZ0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Fr... 461 e-128 UniRef50_A6DNF3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Le... 460 e-127 UniRef50_D2PR48 Exodeoxyribonuclease V, gamma subunit n=12 Tax=A... 458 e-127 UniRef50_Q14GK3 Exodeoxyribonuclease V gamma chain n=16 Tax=Fran... 457 e-126 UniRef50_A9BB00 Possible exodeoxyribonuclease V subunit C 125 kD... 455 e-126 UniRef50_Q7VBK2 Exonuclease V gamma subunit n=1 Tax=Prochlorococ... 451 e-125 UniRef50_A2C3H2 Possible exodeoxyribonuclease V subunit C 125 kD... 451 e-125 UniRef50_Q89AB4 Exodeoxyribonuclease V gamma chain n=1 Tax=Buchn... 447 e-123 UniRef50_C8XGX0 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Na... 444 e-123 UniRef50_C1ACJ2 Exodeoxyribonuclease V gamma subunit n=1 Tax=Gem... 444 e-122 UniRef50_C7PDT3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ch... 440 e-121 UniRef50_P96921 Exodeoxyribonuclease V gamma chain n=23 Tax=Myco... 440 e-121 UniRef50_Q8D2T9 RecC protein n=1 Tax=Wigglesworthia glossinidia ... 439 e-121 UniRef50_C4GHY2 Putative uncharacterized protein n=1 Tax=Kingell... 434 e-120 UniRef50_D2U882 Probable exodeoxyribonuclease v, gamma chain pro... 433 e-119 UniRef50_C6HV34 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Le... 432 e-119 UniRef50_A1V2S0 Exodeoxyribonuclease V, gamma subunit n=90 Tax=c... 431 e-119 UniRef50_C6NU56 Exodeoxyribonuclease V gamma chain n=1 Tax=Acidi... 429 e-118 UniRef50_Q3BM39 Exodeoxyribonuclease V, gamma chain n=19 Tax=Xan... 425 e-117 UniRef50_A2C8A0 Possible exodeoxyribonuclease V gamma chain n=4 ... 415 e-114 UniRef50_UPI0001C32181 exodeoxyribonuclease V, gamma subunit n=1... 407 e-111 UniRef50_Q3AJ30 Exodeoxyribonuclease V, gamma subunit n=5 Tax=Sy... 405 e-111 UniRef50_A5GLW8 Exodeoxyribonuclease V gamma chain n=4 Tax=Synec... 398 e-109 UniRef50_Q05XZ7 Possible exodeoxyribonuclease V gamma chain n=1 ... 397 e-108 UniRef50_A3ETY6 Putative exodeoxyribonuclease V, gamma subunit n... 395 e-108 UniRef50_D0L8X4 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Go... 395 e-108 UniRef50_Q6FF17 Exonuclease V, gamma chain n=3 Tax=Acinetobacter... 383 e-104 UniRef50_B2I2P5 Exonuclease V gamma subunit n=14 Tax=Acinetobact... 381 e-104 UniRef50_A6W6P1 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ki... 379 e-103 UniRef50_D0SSR5 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Ac... 362 4e-98 UniRef50_A2BX92 Possible exodeoxyribonuclease V subunit C 125 kD... 344 1e-92 UniRef50_A5GU99 Exodeoxyribonuclease V gamma chain n=1 Tax=Synec... 340 2e-91 UniRef50_D1R7X4 Putative uncharacterized protein n=1 Tax=Parachl... 339 4e-91 UniRef50_B6FV68 Putative uncharacterized protein n=1 Tax=Clostri... 326 2e-87 UniRef50_B0NKJ8 Putative uncharacterized protein n=8 Tax=Clostri... 317 1e-84 UniRef50_A5ZW43 Putative uncharacterized protein n=1 Tax=Ruminoc... 313 3e-83 UniRef50_C0FS44 Putative uncharacterized protein n=2 Tax=Rosebur... 311 1e-82 UniRef50_A9KTE7 ATP-dependent helicase/deoxyribonuclease subunit... 310 2e-82 UniRef50_C6JEU6 Putative uncharacterized protein n=1 Tax=Ruminoc... 307 2e-81 UniRef50_C4G1J6 Putative uncharacterized protein n=1 Tax=Abiotro... 304 1e-80 UniRef50_A7GAI7 ATP-dependent helicase/deoxyribonuclease subunit... 304 2e-80 UniRef50_UPI00019738F1 ATP-dependent nuclease subunit B n=2 Tax=... 303 3e-80 UniRef50_A8FBR0 ATP-dependent helicase/deoxyribonuclease subunit... 303 4e-80 UniRef50_C6LH76 ATP-dependent nuclease subunit B n=1 Tax=Bryante... 301 1e-79 UniRef50_B1I494 ATP-dependent helicase/deoxyribonuclease subunit... 299 3e-79 UniRef50_Q6MFB7 Putative exodeoxyribonuclease V gamma chain n=1 ... 298 6e-79 UniRef50_C4Z990 AddB n=1 Tax=Eubacterium rectale ATCC 33656 RepI... 298 7e-79 UniRef50_B0KDB8 ATP-dependent helicase/deoxyribonuclease subunit... 298 8e-79 UniRef50_B7JDU3 ATP-dependent helicase/deoxyribonuclease subunit... 298 1e-78 UniRef50_A4J4E2 ATP-dependent helicase/deoxyribonuclease subunit... 297 2e-78 UniRef50_C6CTT5 ATP-dependent nuclease subunit B n=1 Tax=Paeniba... 297 2e-78 UniRef50_Q8ERW6 ATP-dependent helicase/deoxyribonuclease subunit... 294 1e-77 UniRef50_D0LXX8 Exodeoxyribonuclease V n=1 Tax=Haliangium ochrac... 292 7e-77 UniRef50_Q18AP0 ATP-dependent helicase/deoxyribonuclease subunit... 291 8e-77 UniRef50_A8VW70 Beta-lactamase n=1 Tax=Bacillus selenitireducens... 291 1e-76 UniRef50_B8I2Y3 ATP-dependent helicase/deoxyribonuclease subunit... 291 1e-76 UniRef50_A5EWC3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Di... 291 1e-76 UniRef50_A8RRN9 Putative uncharacterized protein n=1 Tax=Clostri... 290 2e-76 UniRef50_B7AS97 Putative uncharacterized protein n=1 Tax=Bactero... 289 3e-76 UniRef50_A4IKW6 ATP-dependent helicase/deoxyribonuclease subunit... 289 6e-76 UniRef50_D2LU04 ATP-dependent nuclease subunit B n=1 Tax=Bacillu... 288 9e-76 UniRef50_UPI00017899D8 ATP-dependent nuclease subunit B n=1 Tax=... 286 2e-75 UniRef50_UPI0001850BBB ATP-dependent nuclease, subunit B n=1 Tax... 286 3e-75 UniRef50_UPI0001BC38B0 ATP-dependent nuclease subunit B n=1 Tax=... 283 4e-74 UniRef50_C6IZE2 ATP-dependent nuclease subunit B n=1 Tax=Paeniba... 282 5e-74 UniRef50_C0GDI4 ATP-dependent nuclease subunit B n=1 Tax=Dethiob... 281 8e-74 UniRef50_C0CXR8 Putative uncharacterized protein n=2 Tax=Clostri... 281 9e-74 UniRef50_B0NWV1 Putative uncharacterized protein n=2 Tax=Clostri... 281 2e-73 UniRef50_A8STZ1 Putative uncharacterized protein n=1 Tax=Coproco... 281 2e-73 UniRef50_B8DF43 ATP-dependent helicase/deoxyribonuclease subunit... 279 4e-73 UniRef50_Q8CRT9 ATP-dependent DNA helicase pcrA n=245 Tax=cellul... 279 5e-73 UniRef50_B2A611 ATP-dependent helicase/deoxyribonuclease subunit... 279 5e-73 UniRef50_B9E0C6 ATP-dependent helicase/deoxyribonuclease subunit... 278 6e-73 UniRef50_UPI0001692BDC ATP-dependent nuclease, subunit B n=1 Tax... 278 7e-73 UniRef50_C5RQN7 ATP-dependent nuclease subunit B n=1 Tax=Clostri... 277 2e-72 UniRef50_B8I5U1 ATP-dependent DNA helicase PcrA n=14 Tax=Firmicu... 276 4e-72 UniRef50_B0TDI1 ATP-dependent helicase/deoxyribonuclease subunit... 275 7e-72 UniRef50_Q0SWW7 ATP-dependent helicase/deoxyribonuclease subunit... 274 1e-71 UniRef50_C9LAG6 ATP-dependent nuclease subunit B n=1 Tax=Blautia... 273 3e-71 UniRef50_Q6GFF2 ATP-dependent DNA helicase pcrA n=81 Tax=cellula... 272 5e-71 UniRef50_Q2RL78 ATP-dependent helicase/deoxyribonuclease subunit... 272 7e-71 UniRef50_A5ZAT7 Putative uncharacterized protein n=1 Tax=Eubacte... 272 7e-71 UniRef50_Q24WW7 ATP-dependent helicase/deoxyribonuclease subunit... 271 1e-70 UniRef50_C0Z546 ATP-dependent nuclease subunit B n=1 Tax=Breviba... 268 1e-69 UniRef50_C9XK50 ATP-dependent DNA helicase n=5 Tax=Clostridium R... 267 2e-69 UniRef50_C7GAA1 ATP-dependent nuclease n=1 Tax=Roseburia intesti... 267 2e-69 UniRef50_C4Z483 Putative uncharacterized protein n=1 Tax=Eubacte... 266 3e-69 UniRef50_A8MLJ7 ATP-dependent DNA helicase PcrA n=3 Tax=Firmicut... 266 3e-69 UniRef50_B6G1B7 Putative uncharacterized protein n=1 Tax=Clostri... 265 6e-69 UniRef50_D1BPP0 ATP-dependent nuclease subunit B-like protein n=... 265 8e-69 UniRef50_UPI00016C0C66 ATP-dependent DNA helicase PcrA n=1 Tax=E... 265 8e-69 UniRef50_C4Z8S4 ATP-dependent DNA helicase PcrA n=17 Tax=Firmicu... 264 2e-68 UniRef50_C4G2S8 Putative uncharacterized protein n=1 Tax=Abiotro... 262 5e-68 UniRef50_C7H111 ATP-dependent DNA helicase PcrA n=1 Tax=Eubacter... 259 3e-67 UniRef50_A9KP66 UvrD/REP helicase n=12 Tax=Bacteria RepID=A9KP66... 258 9e-67 UniRef50_A1HTK8 UvrD-like DNA helicase, C terminal n=1 Tax=Therm... 258 1e-66 UniRef50_C0CPC7 Putative uncharacterized protein n=1 Tax=Blautia... 257 1e-66 UniRef50_A7VJ44 Putative uncharacterized protein n=1 Tax=Clostri... 257 2e-66 UniRef50_Q6MI36 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio ... 257 2e-66 UniRef50_Q04T79 ATP-dependent DNA helicase n=6 Tax=Leptospira Re... 256 3e-66 UniRef50_C9RQA7 Exodeoxyribonuclease V RecC subunit n=1 Tax=Fibr... 255 6e-66 UniRef50_C8NCI0 Exoribodeoxynuclease V, gamma subunit n=1 Tax=Ca... 255 7e-66 UniRef50_A7BX05 Exodeoxyribonuclease V gamma chain n=1 Tax=Beggi... 255 7e-66 UniRef50_Q67MD4 ATP-dependent helicase/deoxyribonuclease subunit... 254 1e-65 UniRef50_Q0TN58 ATP-dependent DNA helicase PcrA n=12 Tax=Clostri... 254 1e-65 UniRef50_A6LPC3 ATP-dependent helicase/deoxyribonuclease subunit... 254 1e-65 UniRef50_B0TWY9 DNA helicase II n=19 Tax=Francisella RepID=B0TWY... 253 2e-65 UniRef50_D2R9Y0 Putative ATP-dependent DNA helicase PcrA n=1 Tax... 253 2e-65 UniRef50_Q4FSM9 Possible exoribodeoxynuclease V, gamma subunit n... 252 5e-65 UniRef50_C0WAB3 ATP-dependent DNA helicase pcrA n=1 Tax=Acidamin... 252 8e-65 UniRef50_B1HN89 ATP-dependent helicase/deoxyribonuclease subunit... 251 1e-64 UniRef50_C4G8W0 Putative uncharacterized protein n=1 Tax=Shuttle... 250 3e-64 UniRef50_A8SUE8 Putative uncharacterized protein n=4 Tax=Clostri... 250 3e-64 UniRef50_B1C8W2 Putative uncharacterized protein n=1 Tax=Anaerof... 249 4e-64 UniRef50_C0EV12 Putative uncharacterized protein n=1 Tax=Eubacte... 249 4e-64 UniRef50_C8W206 ATP-dependent DNA helicase PcrA n=2 Tax=Clostrid... 249 4e-64 UniRef50_Q83GZ5 ATP-dependent DNA helicase n=2 Tax=Tropheryma wh... 249 5e-64 UniRef50_A1AUN0 ATP-dependent DNA helicase PcrA n=10 Tax=Desulfu... 249 7e-64 UniRef50_C1A8M7 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas ... 248 1e-63 UniRef50_Q0AXV2 DNA helicase/exodeoxyribonuclease V, subunit B n... 248 1e-63 UniRef50_Q04UR0 Exodeoxyribonuclease V, gamma subunit n=4 Tax=Le... 247 1e-63 UniRef50_A7VTM6 Putative uncharacterized protein n=1 Tax=Clostri... 247 2e-63 UniRef50_C4V2E0 ATP-dependent DNA helicase n=1 Tax=Selenomonas f... 247 3e-63 UniRef50_C0VSX9 ATP-dependent DNA helicase n=2 Tax=Corynebacteri... 246 4e-63 UniRef50_C6A858 Superfamily I DNA and RNA helicase n=18 Tax=Bifi... 246 5e-63 UniRef50_A0Q2Q4 ATP-dependent DNA helicase PcrA, putative n=23 T... 245 7e-63 UniRef50_D1CD72 UvrD/REP helicase n=1 Tax=Thermobaculum terrenum... 245 7e-63 UniRef50_Q1PY53 Strongly similar to ATP-dependent DNA helicase n... 245 8e-63 UniRef50_C5NYN7 ATP-dependent helicase PcrA n=1 Tax=Gemella haem... 244 1e-62 UniRef50_Q68WT1 DNA helicase II n=17 Tax=Rickettsieae RepID=UVRD... 244 1e-62 UniRef50_A4XKK0 ATP-dependent DNA helicase PcrA n=2 Tax=Clostrid... 244 2e-62 UniRef50_C8WP33 UvrD/REP helicase n=3 Tax=Coriobacteriaceae RepI... 244 2e-62 UniRef50_C2CV85 Possible ATP-dependent DNA helicase n=2 Tax=Bifi... 243 2e-62 UniRef50_A0AL19 ATP-dependent helicase/deoxyribonuclease subunit... 243 3e-62 UniRef50_A6TVN9 ATP-dependent helicase/deoxyribonuclease subunit... 243 3e-62 UniRef50_B8GFE8 UvrD/REP helicase n=1 Tax=Methanosphaerula palus... 243 4e-62 UniRef50_C7NAU4 UvrD/REP helicase n=5 Tax=Fusobacteriaceae RepID... 243 4e-62 UniRef50_D1PL59 ATP-dependent DNA helicase n=4 Tax=Ruminococcace... 242 5e-62 UniRef50_D2RIV6 ATP-dependent DNA helicase PcrA n=6 Tax=Veillone... 242 5e-62 UniRef50_C7HU69 ATP-dependent DNA helicase PcrA n=2 Tax=Anaeroco... 242 6e-62 UniRef50_Q2RGX9 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 242 7e-62 UniRef50_B2A5W4 UvrD/REP helicase n=1 Tax=Natranaerobius thermop... 241 1e-61 UniRef50_B8FP41 ATP-dependent DNA helicase PcrA n=10 Tax=Firmicu... 241 1e-61 UniRef50_C7RHP9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7R... 241 1e-61 UniRef50_A5TXQ2 Superfamily I ATP-dependent helicase n=15 Tax=Fu... 241 2e-61 UniRef50_C0R0K3 ATP-dependent DNA helicase n=2 Tax=Brachyspira R... 240 2e-61 UniRef50_C2EDG9 ATP-dependent deoxyribonuclease, subunit B n=1 T... 240 2e-61 UniRef50_A7KV33 PcrA helicase n=1 Tax=Bacillus phage 0305phi8-36... 239 5e-61 UniRef50_UPI000051001F putative ATP-dependent DNA helicase II n=... 239 5e-61 UniRef50_A5GA79 UvrD/REP helicase n=10 Tax=Desulfuromonadales Re... 239 5e-61 UniRef50_D0LJZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum D... 239 7e-61 UniRef50_UPI00016B20E8 ATP-dependent DNA helicase PcrA n=1 Tax=c... 238 7e-61 UniRef50_D0JAI1 ATP-dependent DNA helicase n=2 Tax=Blattabacteri... 238 9e-61 UniRef50_B3EU74 UvrD/REP helicase n=4 Tax=Bacteroidetes RepID=B3... 238 1e-60 UniRef50_Q1IVP8 ATP-dependent DNA helicase, Rep family n=2 Tax=B... 237 2e-60 UniRef50_B9XFA2 ATP-dependentnuclease subunitB n=1 Tax=bacterium... 237 2e-60 UniRef50_Q28NL8 ATP-dependent DNA helicase, Rep family n=11 Tax=... 237 2e-60 UniRef50_C7QGW9 ATP-dependent DNA helicase PcrA n=8 Tax=Bacteria... 237 2e-60 UniRef50_A8SJB4 Putative uncharacterized protein n=1 Tax=Parvimo... 237 3e-60 UniRef50_Q0AHY9 ATP-dependent DNA helicase UvrD n=16 Tax=Betapro... 237 3e-60 UniRef50_B5YF03 ATP-dependent DNA helicase PcrA n=2 Tax=Dictyogl... 236 3e-60 UniRef50_Q9CD72 ATP-dependent DNA helicase pcrA n=26 Tax=Actinom... 236 3e-60 UniRef50_A8SMG4 Putative uncharacterized protein n=1 Tax=Parvimo... 236 3e-60 UniRef50_Q0AZZ6 ATP-dependent DNA helicase PcrA n=1 Tax=Syntroph... 236 4e-60 UniRef50_Q4L4Y2 ATP-dependent helicase/deoxyribonuclease subunit... 235 8e-60 UniRef50_B1GYW6 ATP-dependent UvrD family DNA helicase PcrA n=1 ... 235 8e-60 UniRef50_C1XMD9 ATP-dependent DNA helicase, Rep family n=1 Tax=M... 235 1e-59 UniRef50_Q1DAU6 ATP-dependent DNA helicase, UvrD/REP family n=6 ... 235 1e-59 UniRef50_A9M0G6 ATP-dependent DNA helicase n=38 Tax=Betaproteoba... 234 1e-59 UniRef50_B1I553 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria... 234 1e-59 UniRef50_Q03NA6 ATP-dependent helicase/deoxyribonuclease subunit... 234 1e-59 UniRef50_B2GM51 ATP-dependent DNA helicase UvrD1 n=10 Tax=Actino... 234 2e-59 UniRef50_A0RUT2 Superfamily I helicase n=1 Tax=Cenarchaeum symbi... 234 2e-59 UniRef50_A6DKH4 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa ... 233 2e-59 UniRef50_P57654 ATP-dependent DNA helicase rep n=4 Tax=Buchnera ... 233 3e-59 UniRef50_Q2S550 ATP-dependent DNA helicase pcrA n=2 Tax=Rhodothe... 233 3e-59 UniRef50_C1ZAM6 DNA/RNA helicase, superfamily I n=1 Tax=Planctom... 233 3e-59 UniRef50_Q8EUN0 ATP-dependent DNA helicase n=1 Tax=Mycoplasma pe... 233 4e-59 UniRef50_D0BN23 ATP-dependent DNA helicase PcrA n=5 Tax=Firmicut... 233 4e-59 UniRef50_C7MP63 DNA/RNA helicase, superfamily I n=6 Tax=Coriobac... 233 4e-59 UniRef50_B5K795 UvrD/REP helicase n=5 Tax=Rhodobacterales RepID=... 233 4e-59 UniRef50_A9F541 ATP-dependent DNA helicase n=1 Tax=Sorangium cel... 232 4e-59 UniRef50_D1NAY9 UvrD/REP helicase n=1 Tax=Victivallis vadensis A... 232 4e-59 UniRef50_C1A3F5 ATP-dependent DNA helicase UvrD1 n=31 Tax=Bacter... 232 4e-59 UniRef50_UPI0001C37867 ATP-dependent DNA helicase PcrA n=1 Tax=R... 232 5e-59 UniRef50_B0RZV9 ATP-dependent DNA helicase n=2 Tax=Finegoldia ma... 232 6e-59 UniRef50_A8LAX0 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria... 232 6e-59 UniRef50_Q1WRR9 ATP-dependent helicase/deoxyribonuclease subunit... 232 7e-59 UniRef50_Q5NVY5 ATP-dependent DNA helicase n=2 Tax=Archaea RepID... 231 1e-58 UniRef50_C9LR66 ATP-dependent DNA helicase PcrA n=1 Tax=Dialiste... 231 2e-58 UniRef50_A4XBE9 ATP-dependent DNA helicase PcrA n=18 Tax=Actinom... 230 2e-58 UniRef50_Q5PB91 DNA helicase II n=20 Tax=Rickettsiales RepID=Q5P... 230 2e-58 UniRef50_C8WTI7 ATP-dependent DNA helicase PcrA n=2 Tax=Alicyclo... 230 2e-58 UniRef50_C7M3I8 UvrD/REP helicase n=3 Tax=Bacteroidetes RepID=C7... 230 2e-58 UniRef50_B2KB12 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum... 230 2e-58 UniRef50_B4CU41 UvrD/REP helicase n=1 Tax=Chthoniobacter flavus ... 230 2e-58 UniRef50_A1TNG2 ATP-dependent DNA helicase UvrD n=11 Tax=cellula... 230 2e-58 UniRef50_D2PLA7 UvrD/REP helicase n=1 Tax=Kribbella flavida DSM ... 230 3e-58 UniRef50_C6D4S8 ATP-dependent DNA helicase PcrA n=46 Tax=Firmicu... 230 3e-58 UniRef50_B1YKM7 ATP-dependent helicase/deoxyribonuclease subunit... 229 4e-58 UniRef50_Q018Z5 ATP-dependent DNA helicase (ISS) n=1 Tax=Ostreoc... 229 7e-58 UniRef50_C1ZKV9 DNA/RNA helicase, superfamily I n=1 Tax=Planctom... 229 7e-58 UniRef50_B2V7G3 UvrD/REP helicase n=5 Tax=Aquificales RepID=B2V7... 228 1e-57 UniRef50_C7N6W8 DNA/RNA helicase, superfamily I n=1 Tax=Slackia ... 228 1e-57 UniRef50_A6UNC7 UvrD/REP helicase n=1 Tax=Methanococcus vannieli... 228 1e-57 UniRef50_C9LTM7 ATP-dependent nuclease subunit B n=1 Tax=Selenom... 228 1e-57 UniRef50_C2KR35 ATP-dependent DNA helicase n=3 Tax=Mobiluncus Re... 227 1e-57 UniRef50_P03018 DNA helicase II n=409 Tax=cellular organisms Rep... 227 1e-57 UniRef50_D1A297 ATP-dependent DNA helicase PcrA n=3 Tax=Actinomy... 227 2e-57 UniRef50_C0R2D4 ATP-dependent DNA helicase n=4 Tax=Brachyspira R... 227 3e-57 UniRef50_B7C8B0 Putative uncharacterized protein n=1 Tax=Eubacte... 227 3e-57 UniRef50_C3RQ43 ATP-dependent DNA helicase n=4 Tax=Bacteria RepI... 227 3e-57 UniRef50_D0LIZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum D... 226 3e-57 UniRef50_A9WKU6 DNA helicase II n=2 Tax=Bacteria RepID=A9WKU6_RENSM 226 3e-57 UniRef50_Q21PD1 ATP-dependent DNA helicase Rep n=15 Tax=Gammapro... 226 4e-57 UniRef50_A4RXK7 Predicted protein (Fragment) n=1 Tax=Ostreococcu... 226 4e-57 UniRef50_Q67KI7 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 226 4e-57 UniRef50_UPI0001C3187F UvrD/REP helicase n=1 Tax=Conexibacter wo... 225 5e-57 UniRef50_C3QGR5 ATP-dependent DNA helicase n=23 Tax=Bacteroidale... 225 7e-57 UniRef50_B0MNA1 Putative uncharacterized protein n=3 Tax=Clostri... 225 7e-57 UniRef50_Q1J014 UvrD/REP helicase n=4 Tax=Deinococci RepID=Q1J01... 225 8e-57 UniRef50_C5VHV2 ATP-dependent DNA helicase PcrA n=20 Tax=Bactero... 225 9e-57 UniRef50_A8HYL6 DNA helicase II n=8 Tax=Rhizobiales RepID=A8HYL6... 225 9e-57 UniRef50_B2RKD8 ATP-dependent DNA helicase n=5 Tax=Bacteroidetes... 225 9e-57 UniRef50_A6CC22 ATP-dependent DNA helicase n=1 Tax=Planctomyces ... 225 9e-57 UniRef50_Q31JE9 ATP-dependent DNA helicase UvrD n=3 Tax=Gammapro... 225 9e-57 UniRef50_D1VUE5 ATP-dependent DNA helicase PcrA n=1 Tax=Peptonip... 225 1e-56 UniRef50_C9LQY6 Putative ATP-dependent nuclease subunit B n=1 Ta... 224 1e-56 UniRef50_B5YHS6 ATP-dependent DNA helicase PcrA n=1 Tax=Thermode... 224 1e-56 UniRef50_C9KJP7 ATP-dependent nuclease subunit B n=1 Tax=Mitsuok... 224 1e-56 UniRef50_A6GG96 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica ... 224 2e-56 UniRef50_B2S250 Rep helicase, single-stranded DNA-dependent ATPa... 224 2e-56 UniRef50_A5CU47 ATP-dependent DNA helicase n=4 Tax=Actinobacteri... 224 2e-56 UniRef50_A1AVZ1 UvrD/REP helicase n=3 Tax=Gammaproteobacteria Re... 224 2e-56 UniRef50_B9X9R1 UvrD/REP helicase n=1 Tax=bacterium Ellin514 Rep... 224 2e-56 UniRef50_C9LD15 ATP-dependent DNA helicase PcrA n=1 Tax=Prevotel... 224 2e-56 UniRef50_A8U8N1 Exonuclease RexB n=1 Tax=Carnobacterium sp. AT7 ... 223 3e-56 UniRef50_B1XW04 UvrD/REP helicase n=41 Tax=Bacteria RepID=B1XW04... 223 3e-56 UniRef50_Q0SMP9 Rep helicase, single-stranded DNA-dependent ATPa... 223 4e-56 UniRef50_Q98PM4 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma p... 222 5e-56 UniRef50_C4V2E4 ATP-dependent deoxyribonuclease subunit B n=2 Ta... 222 7e-56 UniRef50_C5BBB0 ATP-dependent DNA helicase Rep, putative n=2 Tax... 222 7e-56 UniRef50_C1TPS7 DNA/RNA helicase, superfamily I n=1 Tax=Dethiosu... 222 8e-56 UniRef50_B3QYS3 UvrD/REP helicase n=9 Tax=Chlorobiaceae RepID=B3... 222 8e-56 UniRef50_A9BDV1 UvrD/REP helicase n=44 Tax=Cyanobacteria RepID=A... 222 9e-56 UniRef50_A0QK57 Superfamily protein I DNA and RNA helicases n=3 ... 221 1e-55 UniRef50_C0WLM6 ATP-dependent deoxyribonuclease, subunit B n=3 T... 221 1e-55 UniRef50_D1ACX8 UvrD/REP helicase n=2 Tax=Streptosporangineae Re... 221 1e-55 UniRef50_D1BXF2 ATP-dependent DNA helicase PcrA n=5 Tax=Actinomy... 221 2e-55 UniRef50_C6NTI8 ATP-dependent DNA helicase UvrD/PcrA n=2 Tax=Gam... 221 2e-55 UniRef50_C8WV10 UvrD/REP helicase n=2 Tax=Alicyclobacillus acido... 220 2e-55 UniRef50_B0MU18 Putative uncharacterized protein n=2 Tax=Bactero... 220 2e-55 UniRef50_C7PL50 UvrD/REP helicase n=1 Tax=Chitinophaga pinensis ... 220 2e-55 UniRef50_B0P0N3 Putative uncharacterized protein n=2 Tax=Bacteri... 220 2e-55 UniRef50_UPI0000E87DAA UvrD/REP helicase n=1 Tax=Methylophilales... 220 2e-55 UniRef50_Q2J6E3 UvrD/REP helicase n=4 Tax=Actinomycetales RepID=... 220 3e-55 UniRef50_A8R903 Putative uncharacterized protein n=2 Tax=Erysipe... 220 3e-55 UniRef50_A0PR94 ATP-dependent DNA helicase n=12 Tax=Mycobacteriu... 220 3e-55 UniRef50_C5C915 ATP-dependent DNA helicase PcrA n=7 Tax=Actinomy... 220 3e-55 UniRef50_C4FTG6 Putative uncharacterized protein n=1 Tax=Catonel... 219 4e-55 UniRef50_C9RKG0 UvrD/REP helicase n=1 Tax=Fibrobacter succinogen... 219 6e-55 UniRef50_A7NGD4 UvrD/REP helicase n=11 Tax=Chloroflexi RepID=A7N... 219 6e-55 UniRef50_Q6MAS4 Probable ATP-dependent DNA helicase, mutU n=1 Ta... 219 7e-55 UniRef50_C9RM93 UvrD/REP helicase n=1 Tax=Fibrobacter succinogen... 218 8e-55 UniRef50_Q7UIR9 ATP-dependent DNA helicase n=2 Tax=Planctomyceta... 218 9e-55 UniRef50_Q4A5L9 Atp-dependent helicase n=2 Tax=Mycoplasma synovi... 218 9e-55 UniRef50_B9KXW3 ATP-dependent DNA helicase pcrA n=2 Tax=Thermomi... 218 1e-54 UniRef50_B6QHN1 ATP-depentend DNA helicase, putative n=1 Tax=Pen... 217 1e-54 UniRef50_A6GB18 ATP-dependent DNA helicase PcrA n=1 Tax=Plesiocy... 217 2e-54 UniRef50_Q3A0S9 ATP-dependent DNA helicase PcrA n=1 Tax=Pelobact... 217 2e-54 UniRef50_B9KCT9 ATP-dependent DNA helicase n=1 Tax=Campylobacter... 217 2e-54 UniRef50_A5IY88 ATP dependent helicase n=2 Tax=Mycoplasma RepID=... 217 2e-54 UniRef50_A9ETX5 ATP-depentend DNA helicase n=1 Tax=Sorangium cel... 217 2e-54 UniRef50_Q6XYV7 ATP-dependent DNA helicase n=2 Tax=Spiroplasma R... 217 3e-54 UniRef50_D1YX62 Putative ATP-dependent DNA helicase n=1 Tax=Meth... 216 3e-54 UniRef50_A7VXI0 Putative uncharacterized protein n=1 Tax=Clostri... 215 5e-54 UniRef50_A4IYZ2 ATP-dependent DNA helicase/UvrD/REP helicase n=2... 215 6e-54 UniRef50_C1SJ11 DNA/RNA helicase, superfamily I n=1 Tax=Denitrov... 215 6e-54 UniRef50_A9NHW3 DNA helicase II n=1 Tax=Acholeplasma laidlawii P... 215 8e-54 UniRef50_D2NR24 Superfamily I DNA and RNA helicase n=17 Tax=Bact... 215 8e-54 UniRef50_D0RN21 ATP-dependent DNA helicase PcrA n=1 Tax=alpha pr... 215 9e-54 UniRef50_C8WBZ1 UvrD/REP helicase n=7 Tax=Alphaproteobacteria Re... 215 9e-54 UniRef50_A5EWK9 DNA helicase II n=1 Tax=Dichelobacter nodosus VC... 215 1e-53 UniRef50_A5GQG6 UvrD/REP helicase n=18 Tax=Cyanobacteria RepID=A... 215 1e-53 UniRef50_Q256I8 DNA/RNA helicase n=17 Tax=Chlamydiales RepID=Q25... 214 1e-53 UniRef50_B0VGK7 Superfamily I DNA and RNA helicases n=1 Tax=Cand... 214 1e-53 UniRef50_D0LEA1 UvrD/REP helicase n=1 Tax=Gordonia bronchialis D... 214 2e-53 UniRef50_B2UQR8 UvrD/REP helicase n=2 Tax=Verrucomicrobiaceae Re... 213 3e-53 UniRef50_D1KF50 SRS2 n=6 Tax=rosids RepID=D1KF50_ARATH 213 3e-53 UniRef50_Q6MND7 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio ... 213 3e-53 UniRef50_C8S459 UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 Re... 213 3e-53 UniRef50_Q6A851 Exodeoxyribonuclease V gamma chain n=3 Tax=Propi... 213 3e-53 UniRef50_Q4FPM1 DNA helicase II n=5 Tax=Bacteria RepID=Q4FPM1_PELUB 213 3e-53 UniRef50_A5U7M1 UvrD/Rep family helicase n=13 Tax=Corynebacterin... 213 3e-53 UniRef50_P44804 ATP-dependent DNA helicase rep n=275 Tax=Proteob... 213 3e-53 UniRef50_D1R4U3 Putative uncharacterized protein n=1 Tax=Parachl... 213 3e-53 UniRef50_B3PNG5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma ar... 213 4e-53 UniRef50_UPI0001AEED98 ATP-dependent DNA helicase n=3 Tax=Strept... 212 5e-53 UniRef50_A1WZS5 ATP-dependent DNA helicase UvrD n=3 Tax=Gammapro... 212 5e-53 UniRef50_C5VEC6 ATP-dependent DNA helicase n=2 Tax=Corynebacteri... 212 5e-53 UniRef50_A1SGT7 UvrD/REP helicase n=1 Tax=Nocardioides sp. JS614... 212 5e-53 UniRef50_B7AA42 UvrD/REP helicase n=1 Tax=Thermus aquaticus Y51M... 212 7e-53 UniRef50_A0LDC5 ATP-dependent DNA helicase, Rep family n=1 Tax=M... 212 8e-53 UniRef50_C8XDJ8 ATP-dependent DNA helicase PcrA n=2 Tax=Actinomy... 212 8e-53 UniRef50_C6HUX3 Putative ATP-dependent DNA helicase, UvrD/REP fa... 212 9e-53 UniRef50_A4F8N5 Probable ATP-dependent DNA helicase n=1 Tax=Sacc... 212 9e-53 UniRef50_Q2GE51 Helicase, UvrD/Rep family n=2 Tax=Neorickettsia ... 211 1e-52 UniRef50_D1J8P0 ATP-dependent helicase n=1 Tax=Mycoplasma homini... 211 1e-52 UniRef50_C3XD55 ATP-dependent DNA helicase n=1 Tax=Helicobacter ... 211 1e-52 UniRef50_D2R5I6 UvrD/REP helicase n=1 Tax=Pirellula staleyi DSM ... 211 1e-52 UniRef50_C7MAK0 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 210 2e-52 UniRef50_D2PLA6 UvrD/REP helicase n=2 Tax=Nocardioidaceae RepID=... 210 2e-52 UniRef50_A2QP78 Contig An07c0280, complete genome n=8 Tax=Tricho... 210 2e-52 UniRef50_C7QE44 UvrD/REP helicase n=1 Tax=Catenulispora acidiphi... 210 2e-52 UniRef50_UPI000050F875 UvrD/REP helicase n=1 Tax=Brevibacterium ... 210 3e-52 UniRef50_Q2STJ5 ATP-dependent DNA helicase Rep n=90 Tax=Bacteria... 210 3e-52 UniRef50_P45612 Probable DNA helicase II homolog n=4 Tax=Mollicu... 210 3e-52 UniRef50_A6VEA1 ATP-dependent DNA helicase Rep n=102 Tax=Proteob... 209 4e-52 UniRef50_D2R6Z4 UvrD/REP helicase n=4 Tax=Planctomycetaceae RepI... 209 4e-52 UniRef50_Q029V8 ATP-dependent DNA helicase, Rep family n=1 Tax=C... 209 4e-52 UniRef50_Q6MFN4 Related to ATP-dependent DNA helicase n=7 Tax=So... 209 6e-52 UniRef50_Q30TG3 UvrD/REP helicase n=8 Tax=Epsilonproteobacteria ... 209 7e-52 UniRef50_UPI00016C5306 ATP-dependent DNA helicase n=2 Tax=Gemmat... 209 8e-52 UniRef50_Q88U40 ATP-dependent helicase/deoxyribonuclease subunit... 208 9e-52 UniRef50_C2L0R7 ATP-dependent DNA helicase PcrA n=1 Tax=Oribacte... 208 1e-51 UniRef50_O26572 DNA helicase II n=1 Tax=Methanothermobacter ther... 208 1e-51 UniRef50_C3JKU1 UvrD/REP helicase domain protein n=6 Tax=Coryneb... 208 1e-51 UniRef50_B2GL30 UvrD/Rep helicase family protein n=1 Tax=Kocuria... 208 1e-51 UniRef50_A6NZ65 Putative uncharacterized protein n=1 Tax=Bactero... 207 2e-51 UniRef50_C6V4L3 DNA helicase II, UvrD/Rep family, N-terminal n=4... 207 2e-51 UniRef50_B0DAK6 Predicted protein n=1 Tax=Laccaria bicolor S238N... 207 2e-51 UniRef50_Q11GU4 ATP-dependent DNA helicase, Rep family n=53 Tax=... 207 2e-51 UniRef50_D1X726 UvrD/REP helicase n=22 Tax=Streptomyces RepID=D1... 207 2e-51 UniRef50_Q836J9 ATP-dependent helicase/deoxyribonuclease subunit... 206 4e-51 UniRef50_C4DDU0 DNA/RNA helicase, superfamily I n=1 Tax=Stackebr... 206 4e-51 UniRef50_Q1CRC0 DNA helicase II n=13 Tax=Helicobacter RepID=Q1CR... 205 7e-51 UniRef50_A5HZM6 ATP-dependent DNA helicase n=4 Tax=Clostridiales... 205 7e-51 UniRef50_Q6KHF5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mo... 205 8e-51 UniRef50_C9M511 ATP-dependent DNA helicase PcrA n=2 Tax=Synergis... 205 1e-50 UniRef50_C2BJF9 Superfamily I DNA and RNA helicase n=4 Tax=Coryn... 205 1e-50 UniRef50_Q6ZHK2 Os07g0492100 protein n=4 Tax=Poaceae RepID=Q6ZHK... 205 1e-50 UniRef50_C8NER5 Exonuclease RexB n=1 Tax=Granulicatella adiacens... 205 1e-50 UniRef50_Q11Q08 DNA-dependent ATPase I and helicase II n=1 Tax=C... 204 1e-50 UniRef50_A6NVW2 Putative uncharacterized protein n=1 Tax=Bactero... 204 1e-50 UniRef50_A5FDD0 ATP-dependent DNA helicase, Rep family n=2 Tax=F... 204 1e-50 UniRef50_Q89A21 ATP-dependent DNA helicase rep n=2 Tax=Buchnera ... 204 2e-50 UniRef50_C0QC97 PcrA1 n=1 Tax=Desulfobacterium autotrophicum HRM... 204 2e-50 UniRef50_A9WPI8 ATP-dependent DNA helicase n=1 Tax=Renibacterium... 204 2e-50 UniRef50_Q8D2T2 UvrD protein n=1 Tax=Wigglesworthia glossinidia ... 204 2e-50 UniRef50_A8TD22 UvrD/REP helicase n=2 Tax=cellular organisms Rep... 204 2e-50 UniRef50_B0SSS8 ATP-dependent DNA helicase PcrA n=6 Tax=Leptospi... 204 2e-50 UniRef50_Q7NB99 UvrD n=1 Tax=Mycoplasma gallisepticum RepID=Q7NB... 203 4e-50 UniRef50_C8V6U5 DNA helicase and DNA-dependent ATPase (Eurofung)... 203 4e-50 UniRef50_D2MPE9 Putative ATP-dependent helicase PcrA n=1 Tax=Bul... 203 4e-50 UniRef50_A1BEA2 ATP-dependent DNA helicase PcrA n=2 Tax=Chlorobi... 203 4e-50 UniRef50_C3JBX6 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 202 5e-50 UniRef50_Q98PF5 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma p... 202 5e-50 UniRef50_D0L0Z4 UvrD/REP helicase n=1 Tax=Halothiobacillus neapo... 202 6e-50 UniRef50_A0M3U3 PcrA-like UvrD/Rep family ATP-dependent DNA heli... 202 7e-50 UniRef50_B1AJE0 ATP-dependent DNA helicase PcrA n=15 Tax=Ureapla... 202 8e-50 UniRef50_A1W088 ATP-dependent DNA helicase, UvrD/REP family n=30... 202 9e-50 UniRef50_A0LFK0 ATP-dependent DNA helicase, Rep family n=1 Tax=S... 202 9e-50 UniRef50_C7R1Q8 UvrD/REP helicase n=1 Tax=Jonesia denitrificans ... 202 1e-49 UniRef50_B0KVA6 Putative UvrD/REP helicase n=1 Tax=uncultured ca... 202 1e-49 UniRef50_O31626 Putative ATP-dependent DNA helicase yjcD n=3 Tax... 201 1e-49 UniRef50_Q38X70 ATP-dependent helicase/deoxyribonuclease subunit... 201 1e-49 UniRef50_UPI00016C0037 ATP-dependent nuclease subunit B n=1 Tax=... 201 1e-49 UniRef50_C6NVE2 ATP-dependent DNA helicase Rep n=1 Tax=Acidithio... 201 1e-49 UniRef50_D1B9M8 UvrD/REP helicase n=1 Tax=Thermanaerovibrio acid... 200 2e-49 UniRef50_D2SFF1 UvrD/REP helicase n=1 Tax=Geodermatophilus obscu... 200 3e-49 UniRef50_Q1DC55 ATP-dependent DNA helicase PcrA n=2 Tax=Cystobac... 200 3e-49 UniRef50_C5TB61 UvrD/REP helicase n=3 Tax=cellular organisms Rep... 199 5e-49 UniRef50_Q0F272 ATP-dependent DNA helicase Rep n=1 Tax=Mariprofu... 199 7e-49 UniRef50_B3QF13 UvrD/REP helicase n=9 Tax=Rhizobiales RepID=B3QF... 199 8e-49 UniRef50_C1E652 ATP-dependent DNA helicase n=2 Tax=Micromonas Re... 198 1e-48 UniRef50_C0EHH2 Putative uncharacterized protein n=1 Tax=Clostri... 198 1e-48 UniRef50_Q72IS0 DNA helicase uvrD n=3 Tax=Thermus thermophilus R... 197 2e-48 UniRef50_B2A098 UvrD/REP helicase n=3 Tax=Verrucomicrobia RepID=... 197 2e-48 UniRef50_C2ME74 ATP-dependent DNA helicase PcrA n=1 Tax=Porphyro... 196 3e-48 UniRef50_B2WB64 ATP-dependent DNA helicase pcrA n=2 Tax=Pleospor... 196 4e-48 UniRef50_B3E665 UvrD/REP helicase n=1 Tax=Geobacter lovleyi SZ R... 196 4e-48 UniRef50_A1SGT8 UvrD/REP helicase n=1 Tax=Nocardioides sp. JS614... 196 4e-48 UniRef50_B4UKQ6 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID... 196 4e-48 UniRef50_UPI000023F08A hypothetical protein FG08405.1 n=1 Tax=Gi... 196 5e-48 UniRef50_C7MVN2 DNA/RNA helicase, superfamily I n=5 Tax=Actinomy... 195 6e-48 UniRef50_Q3F0Y3 ATP-dependent DNA helicase pcrA n=2 Tax=Bacillus... 195 7e-48 UniRef50_B9XNK2 UvrD/REP helicase n=2 Tax=Verrucomicrobiales Rep... 195 7e-48 UniRef50_D2MLK1 DNA helicase, UvrD/REP type n=1 Tax=Candidatus P... 195 1e-47 UniRef50_B4U5U9 UvrD/REP helicase n=1 Tax=Hydrogenobaculum sp. Y... 195 1e-47 UniRef50_B2UPY5 UvrD/REP helicase n=2 Tax=Verrucomicrobia RepID=... 194 1e-47 UniRef50_C5QUC7 Possible ATP-dependent DNA helicase PcrA (Fragme... 194 1e-47 UniRef50_C1YL28 DNA/RNA helicase, superfamily I n=2 Tax=Nocardio... 194 2e-47 UniRef50_Q123W9 UvrD/REP helicase n=16 Tax=cellular organisms Re... 194 2e-47 UniRef50_D0LEA2 UvrD/REP helicase n=3 Tax=Corynebacterineae RepI... 194 3e-47 UniRef50_A0JYL5 UvrD/REP helicase n=4 Tax=Actinomycetales RepID=... 193 3e-47 UniRef50_C2KVH9 ATP-dependent deoxyribonuclease subunit B n=1 Ta... 192 5e-47 UniRef50_Q057F6 Exodeoxyribonuclease V, g chain n=1 Tax=Buchnera... 192 9e-47 UniRef50_A8ZTY6 UvrD/REP helicase n=1 Tax=Desulfococcus oleovora... 192 1e-46 UniRef50_Q1Q1J4 Putative uncharacterized protein n=1 Tax=Candida... 191 1e-46 UniRef50_C1V6P7 ATP-dependent exonuclease V beta subunit, helica... 191 1e-46 UniRef50_D1V906 UvrD/REP helicase n=1 Tax=Frankia sp. EuI1c RepI... 191 1e-46 UniRef50_C5CB78 DNA/RNA helicase, superfamily I n=1 Tax=Micrococ... 191 1e-46 UniRef50_Q6AJ72 Probable ATP-dependent DNA helicase, UvrD/REP fa... 191 1e-46 UniRef50_Q038V6 ATP-dependent helicase/deoxyribonuclease subunit... 191 1e-46 UniRef50_B1VAQ4 ATP-dependent DNA helicase n=1 Tax=Candidatus Ph... 190 2e-46 UniRef50_UPI0001BC375D ATP-dependent DNA helicase n=1 Tax=Butyri... 190 2e-46 UniRef50_C0XV87 ATP-dependent DNA helicase n=10 Tax=cellular org... 190 2e-46 UniRef50_B0PD61 Putative uncharacterized protein n=1 Tax=Anaerot... 190 2e-46 UniRef50_B0RZ36 ATP-dependent DNA helicase n=21 Tax=Bacteria Rep... 190 2e-46 UniRef50_A6TQ92 UvrD/REP helicase n=2 Tax=Alkaliphilus RepID=A6T... 190 3e-46 UniRef50_D1ACM7 UvrD/REP helicase n=1 Tax=Thermomonospora curvat... 189 4e-46 UniRef50_A8L2I8 UvrD/REP helicase n=6 Tax=Actinomycetales RepID=... 189 4e-46 UniRef50_Q3KL55 Exodeoxyribonuclease V gamma chain n=11 Tax=Chla... 189 4e-46 UniRef50_C8P127 ATP-dependent DNA helicase PcrA n=1 Tax=Erysipel... 189 5e-46 UniRef50_C8WI10 UvrD/REP helicase n=3 Tax=Bacteria RepID=C8WI10_... 189 5e-46 UniRef50_A5EW07 DNA helicase UvrD n=2 Tax=Dichelobacter nodosus ... 189 5e-46 UniRef50_B2S4R5 DNA helicase II n=3 Tax=Treponema RepID=B2S4R5_T... 189 6e-46 UniRef50_UPI0001B56A46 ATP-dependent DNA helicase n=1 Tax=Strept... 189 7e-46 UniRef50_Q600N7 ATP-dependent DNA helicase n=6 Tax=Mycoplasma Re... 189 7e-46 UniRef50_B3QYG2 UvrD/REP helicase n=1 Tax=Chloroherpeton thalass... 189 8e-46 UniRef50_A4F8N4 Possible ATP-dependent DNA helicase n=2 Tax=Pseu... 189 8e-46 UniRef50_C7M335 UvrD/REP helicase n=1 Tax=Acidimicrobium ferroox... 189 9e-46 UniRef50_D1YBS2 UvrD/REP helicase n=2 Tax=Propionibacterium acne... 188 9e-46 UniRef50_A5VHK1 ATP-dependent helicase/deoxyribonuclease subunit... 188 9e-46 UniRef50_B6IP09 UvrD n=8 Tax=cellular organisms RepID=B6IP09_RHOCS 188 1e-45 UniRef50_A3TGM1 Putative DNA helicase n=1 Tax=Janibacter sp. HTC... 188 1e-45 UniRef50_C5CHH9 ATP-dependent nuclease subunit B-like protein n=... 187 2e-45 UniRef50_C8XJ57 UvrD/REP helicase n=1 Tax=Nakamurella multiparti... 187 2e-45 UniRef50_B3R0N7 ATP-dependent DNA helicase n=1 Tax=Candidatus Ph... 187 2e-45 UniRef50_B8FBU8 UvrD/REP helicase n=2 Tax=Bacteria RepID=B8FBU8_... 187 2e-45 UniRef50_Q03D70 ATP-dependent helicase/deoxyribonuclease subunit... 187 2e-45 UniRef50_A5WC18 UvrD/REP helicase n=2 Tax=Psychrobacter RepID=A5... 187 3e-45 UniRef50_C6P8R1 UvrD/REP helicase n=1 Tax=Thermoanaerobacterium ... 187 3e-45 UniRef50_B0S8V9 ATP-dependent DNA helicase n=2 Tax=Leptospira bi... 187 3e-45 UniRef50_C4DDU1 DNA/RNA helicase, superfamily I n=1 Tax=Stackebr... 186 4e-45 UniRef50_B6K032 ATP-dependent DNA helicase srs2 n=1 Tax=Schizosa... 186 5e-45 UniRef50_A5UVF1 ATP-dependent DNA helicase, Rep family n=6 Tax=C... 186 5e-45 UniRef50_B4VQT2 UvrD/REP helicase subfamily n=6 Tax=Bacteria Rep... 186 5e-45 UniRef50_B9AD93 Putative uncharacterized protein n=2 Tax=Methano... 185 6e-45 UniRef50_D2SFF2 UvrD/REP helicase n=1 Tax=Geodermatophilus obscu... 185 1e-44 UniRef50_A8M3F7 UvrD/REP helicase n=5 Tax=Actinomycetales RepID=... 185 1e-44 UniRef50_A7HBX8 UvrD/REP helicase n=7 Tax=Cystobacterineae RepID... 185 1e-44 UniRef50_C3LBP3 ATP-dependent DNA helicase, UvrD/REP family n=82... 184 1e-44 UniRef50_Q6AFN3 ATP-dependent DNA helicase n=4 Tax=Actinobacteri... 184 2e-44 UniRef50_A8Q3F1 Putative uncharacterized protein n=1 Tax=Malasse... 184 2e-44 UniRef50_Q0EW02 DNA helicase II n=1 Tax=Mariprofundus ferrooxyda... 184 2e-44 UniRef50_B3DUG1 ATP-dependent DNA helicase UvrD/PcrA n=1 Tax=Met... 183 4e-44 UniRef50_C7MBM6 DNA/RNA helicase, superfamily I n=1 Tax=Brachyba... 183 4e-44 UniRef50_D0BK92 Exonuclease RexB n=1 Tax=Granulicatella elegans ... 183 4e-44 UniRef50_A7Z3H2 YjcD n=3 Tax=Bacillus RepID=A7Z3H2_BACA2 183 4e-44 UniRef50_B2IL96 UvrD/REP helicase n=1 Tax=Beijerinckia indica su... 182 5e-44 UniRef50_C4R3W4 DNA helicase and DNA-dependent ATPase n=1 Tax=Pi... 182 5e-44 UniRef50_B2A3D2 UvrD/REP helicase n=1 Tax=Natranaerobius thermop... 182 6e-44 UniRef50_O66983 ATP-dependent DNA helicase REP n=3 Tax=Aquificac... 182 6e-44 UniRef50_C4XGR7 ATP-dependent DNA helicase n=4 Tax=Desulfovibrio... 182 7e-44 UniRef50_B1C9D7 Putative uncharacterized protein n=1 Tax=Anaerof... 182 1e-43 UniRef50_UPI0001C314BB UvrD/REP helicase n=1 Tax=Conexibacter wo... 181 1e-43 UniRef50_Q2NK11 UvrD helicase n=2 Tax=Candidatus Phytoplasma ast... 181 1e-43 UniRef50_C1RHS2 Exonuclease V gamma subunit n=1 Tax=Cellulomonas... 181 1e-43 UniRef50_A6RX56 Putative uncharacterized protein n=2 Tax=Sclerot... 181 2e-43 UniRef50_Q9K8M6 ATP-dependent nuclease subunit A n=1 Tax=Bacillu... 181 2e-43 UniRef50_UPI000185BEF3 ATP-dependent DNA helicase n=1 Tax=Coryne... 180 2e-43 UniRef50_Q67LG5 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 180 2e-43 UniRef50_B0SIS7 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Le... 180 2e-43 UniRef50_B7GLR0 Putative uncharacterized protein n=1 Tax=Anoxyba... 180 2e-43 UniRef50_A7VD84 Putative uncharacterized protein n=2 Tax=Clostri... 180 3e-43 UniRef50_C7RGF8 ATP-dependent nuclease subunit B-like protein n=... 180 3e-43 UniRef50_B8GJD7 UvrD/REP helicase n=1 Tax=Methanosphaerula palus... 180 3e-43 UniRef50_Q10213 ATP-dependent DNA helicase srs2 n=1 Tax=Schizosa... 180 3e-43 UniRef50_B5GJP0 ATP-dependent DNA helicase n=20 Tax=Streptomyces... 180 3e-43 UniRef50_Q9K2F1 Exodeoxyribonuclease V, gamma subunit, putative ... 180 3e-43 UniRef50_A1VZC5 ATP-dependent DNA helicase, putative n=30 Tax=Ep... 180 4e-43 UniRef50_B2GEY3 ATP-dependent helicase/deoxyribonuclease subunit... 179 4e-43 UniRef50_C8WQE2 ATP-dependent nuclease subunit B-like protein n=... 179 4e-43 UniRef50_UPI0001C41A7D ATP-dependent DNA helicase UvrD/REP famil... 179 5e-43 UniRef50_A7AXS4 Putative uncharacterized protein n=1 Tax=Ruminoc... 178 7e-43 UniRef50_UPI0001C42BC3 ATP-dependent DNA helicase n=1 Tax=Bacill... 178 7e-43 UniRef50_B5IF83 UvrD/REP helicase domain protein n=1 Tax=Aciduli... 178 8e-43 UniRef50_A2F783 UvrD/REP helicase family protein n=1 Tax=Trichom... 178 9e-43 UniRef50_C4Z7Y1 DNA helicase II / ATP-dependent DNA helicase Pcr... 178 1e-42 UniRef50_Q2LTE2 UvrD/rep helicase n=1 Tax=Syntrophus aciditrophi... 178 1e-42 UniRef50_Q9S3U7 Rep helicase n=2 Tax=Gammaproteobacteria RepID=Q... 177 2e-42 UniRef50_UPI0001699EF8 Exodeoxyribonuclease V, RecC subunit n=1 ... 177 2e-42 UniRef50_A6W771 UvrD/REP helicase n=1 Tax=Kineococcus radiotoler... 177 2e-42 UniRef50_C6CW81 UvrD/REP helicase n=2 Tax=Bacillales RepID=C6CW8... 177 2e-42 UniRef50_A5I1P6 ATP-dependent DNA helicase n=14 Tax=Clostridium ... 177 2e-42 UniRef50_C9A8J1 Exonuclease RexB n=4 Tax=Enterococcus RepID=C9A8... 177 3e-42 UniRef50_B7GM51 ATP-dependent helicase/nuclease subunit A n=1 Ta... 177 3e-42 UniRef50_A7IDD4 UvrD/REP helicase n=3 Tax=Proteobacteria RepID=A... 177 3e-42 UniRef50_Q04T32 ATP-dependent DNA helicase n=4 Tax=Leptospira Re... 177 3e-42 UniRef50_C6Q0I3 UvrD/REP helicase n=1 Tax=Clostridium carboxidiv... 177 3e-42 UniRef50_C2BHK2 Putative uncharacterized protein n=1 Tax=Anaeroc... 176 4e-42 UniRef50_A9H0P3 UvrD/REP helicase n=3 Tax=Alphaproteobacteria Re... 176 4e-42 UniRef50_B9R0C3 Putative uncharacterized protein n=1 Tax=Labrenz... 176 6e-42 UniRef50_Q6BW47 DEHA2B14410p n=3 Tax=Saccharomycetaceae RepID=Q6... 175 6e-42 UniRef50_A6W770 UvrD/REP helicase n=1 Tax=Kineococcus radiotoler... 175 7e-42 UniRef50_Q2S575 ATP-dependent DNA helicase n=2 Tax=Rhodothermace... 175 9e-42 UniRef50_D1U5K5 UvrD/REP helicase n=1 Tax=Desulfovibrio aespoeen... 175 1e-41 UniRef50_A6VFA5 UvrD/REP helicase n=2 Tax=Methanococcus maripalu... 174 1e-41 UniRef50_Q1NRJ1 UvrD/REP helicase n=3 Tax=Deltaproteobacteria Re... 174 2e-41 UniRef50_A5UJ85 DNA helicase II n=1 Tax=Methanobrevibacter smith... 174 2e-41 UniRef50_A4XB81 UvrD/REP helicase n=4 Tax=Micromonosporaceae Rep... 174 2e-41 UniRef50_D1BAW5 DNA/RNA helicase, superfamily I n=1 Tax=Sanguiba... 173 2e-41 UniRef50_A8ZYJ7 UvrD/REP helicase n=1 Tax=Desulfococcus oleovora... 173 2e-41 UniRef50_D1YBS1 UvrD/REP helicase n=3 Tax=Propionibacterium acne... 173 2e-41 UniRef50_C5RAZ7 ATP-dependent deoxyribonuclease, subunit B n=1 T... 173 3e-41 UniRef50_C7XXL1 ATP-dependent nuclease subunit B n=1 Tax=Lactoba... 173 3e-41 UniRef50_Q5M2T6 ATP-dependent helicase/deoxyribonuclease subunit... 173 3e-41 UniRef50_Q896L9 DNA helicase II n=2 Tax=cellular organisms RepID... 173 3e-41 UniRef50_A5N879 ATP-dependent DNA helicase n=2 Tax=Clostridium k... 173 3e-41 UniRef50_A9KRX8 UvrD/REP helicase n=10 Tax=Bacteria RepID=A9KRX8... 173 3e-41 UniRef50_A9EBT7 Superfamily I DNA and RNA helicase n=1 Tax=Kordi... 173 4e-41 UniRef50_A5KIK3 Putative uncharacterized protein n=2 Tax=Ruminoc... 173 4e-41 UniRef50_Q3AA34 ATP-dependent helicase/deoxyribonuclease subunit... 172 5e-41 UniRef50_C4Y181 Putative uncharacterized protein n=1 Tax=Clavisp... 172 6e-41 UniRef50_C0GR52 UvrD/REP helicase n=1 Tax=Desulfonatronospira th... 172 7e-41 UniRef50_C2UN36 ATP-dependent DNA helicase, UvrD/REP n=3 Tax=Bac... 172 7e-41 UniRef50_B8DQ46 UvrD/REP helicase n=13 Tax=Desulfovibrionales Re... 172 8e-41 UniRef50_B6V2U6 Gp34.33 n=3 Tax=Bacillus phage SPO1 RepID=B6V2U6... 172 1e-40 UniRef50_C4Z0W6 Putative uncharacterized protein n=1 Tax=Eubacte... 171 1e-40 UniRef50_A3DH19 ATP-dependent helicase/nuclease subunit A n=7 Ta... 171 1e-40 UniRef50_Q5HY14 DNA helicase II UvrD n=2 Tax=Gluconobacter oxyda... 171 1e-40 UniRef50_B2KE91 ATP-dependent nuclease subunit B-like protein n=... 171 1e-40 UniRef50_C0ZGU0 Putative ATP-dependent DNA helicase n=1 Tax=Brev... 171 2e-40 UniRef50_C6WM78 UvrD/REP helicase n=4 Tax=Actinomycetales RepID=... 171 2e-40 UniRef50_C6HZQ0 UvrD/REP helicase n=3 Tax=Leptospirillum RepID=C... 170 2e-40 UniRef50_C1RP66 DNA/RNA helicase, superfamily I n=1 Tax=Cellulom... 170 2e-40 UniRef50_Q2J6E2 UvrD/REP helicase n=1 Tax=Frankia sp. CcI3 RepID... 170 2e-40 UniRef50_A9BHB1 UvrD/REP helicase n=8 Tax=Thermotogaceae RepID=A... 170 2e-40 UniRef50_C6XGC2 DNA helicase II n=1 Tax=Candidatus Liberibacter ... 170 2e-40 UniRef50_A1U7Y3 UvrD/REP helicase n=2 Tax=Marinobacter RepID=A1U... 170 2e-40 UniRef50_C8XJ56 UvrD/REP helicase n=1 Tax=Nakamurella multiparti... 170 3e-40 UniRef50_C0W6Z4 Possible UvrD/REP helicase n=1 Tax=Actinomyces u... 170 3e-40 UniRef50_C0QD81 PcrA2 n=2 Tax=Bacteria RepID=C0QD81_DESAH 170 4e-40 UniRef50_D1XU37 UvrD/REP helicase n=3 Tax=Actinomycetales RepID=... 170 4e-40 UniRef50_D2RKU1 Exodeoxyribonuclease V n=1 Tax=Acidaminococcus f... 170 4e-40 UniRef50_A4REL5 Putative uncharacterized protein n=1 Tax=Magnapo... 170 4e-40 UniRef50_A3CVL1 UvrD/REP helicase n=4 Tax=Methanomicrobia RepID=... 169 5e-40 UniRef50_Q9K917 ATP-dependent DNA helicase n=1 Tax=Bacillus halo... 169 6e-40 UniRef50_C5MA33 Predicted protein n=3 Tax=Candida RepID=C5MA33_C... 169 6e-40 UniRef50_B1MZM3 ATP-dependent helicase/deoxyribonuclease subunit... 169 6e-40 UniRef50_C7HSP5 Putative uncharacterized protein n=1 Tax=Anaeroc... 169 6e-40 UniRef50_A8ZXL9 UvrD/REP helicase n=1 Tax=Desulfococcus oleovora... 169 7e-40 UniRef50_Q6C4F2 YALI0E27269p n=1 Tax=Yarrowia lipolytica RepID=Q... 168 1e-39 UniRef50_A3CVM8 ATP-dependent nuclease subunit B-like protein n=... 168 1e-39 UniRef50_C4LK53 Putative ATP-dependent DNA helicase II n=1 Tax=C... 168 1e-39 UniRef50_Q189U3 Putative ATP-dependent DNA helicase n=8 Tax=Clos... 168 1e-39 UniRef50_B8FB90 UvrD/REP helicase n=1 Tax=Desulfatibacillum alke... 168 1e-39 UniRef50_A0LVT8 UvrD/REP helicase n=1 Tax=Acidothermus celluloly... 167 2e-39 UniRef50_Q65LJ9 ATP-dependent helicase/nuclease subunit A n=3 Ta... 167 2e-39 UniRef50_A8YVK1 ATP-dependent helicase/deoxyribonuclease subunit... 167 2e-39 UniRef50_B5YD55 ATP-dependent DNA helicase n=2 Tax=Dictyoglomus ... 167 2e-39 UniRef50_UPI000038E52F UvrD/REP helicase n=1 Tax=Ferroplasma aci... 167 2e-39 UniRef50_B3E1Z6 UvrD/REP helicase n=3 Tax=Geobacter RepID=B3E1Z6... 167 2e-39 UniRef50_C8PVF1 Putative exoribodeoxynuclease V, gamma subunit n... 167 2e-39 UniRef50_Q04GY7 ATP-dependent helicase/nuclease subunit A n=1 Ta... 167 2e-39 UniRef50_Q027B7 DNA helicase/exodeoxyribonuclease V, subunit A n... 167 3e-39 UniRef50_A7BEI4 Putative uncharacterized protein n=1 Tax=Actinom... 166 4e-39 UniRef50_A6GBC2 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica ... 166 4e-39 UniRef50_Q2FNI4 UvrD/REP helicase n=1 Tax=Methanospirillum hunga... 166 4e-39 UniRef50_UPI0001C37CA1 ATP-dependent nuclease subunit B n=1 Tax=... 166 5e-39 UniRef50_B1HN90 ATP-dependent helicase/nuclease subunit A n=2 Ta... 165 7e-39 UniRef50_B9EAN7 ATP-dependent nuclease subunit B n=1 Tax=Macroco... 165 7e-39 UniRef50_Q8ERW5 ATP-dependent helicase/nuclease subunit A n=1 Ta... 165 1e-38 UniRef50_P12954 ATP-dependent DNA helicase SRS2 n=7 Tax=Saccharo... 165 1e-38 UniRef50_C5DG97 KLTH0D03498p n=1 Tax=Lachancea thermotolerans CB... 164 2e-38 UniRef50_Q5WF16 UvrD/REP family ATP-dependent DNA helicase n=1 T... 163 2e-38 UniRef50_B9WE90 ATP-dependent DNA helicase, putative n=1 Tax=Can... 163 3e-38 UniRef50_A6CDV1 UvrD/REP helicase n=1 Tax=Planctomyces maris DSM... 163 4e-38 UniRef50_Q6CK20 KLLA0F14234p n=1 Tax=Kluyveromyces lactis RepID=... 163 4e-38 UniRef50_B3SEY0 Putative uncharacterized protein (Fragment) n=1 ... 162 5e-38 UniRef50_Q71X99 ATP-dependent helicase/nuclease subunit A n=17 T... 162 5e-38 UniRef50_B5RLS9 DNA helicase n=24 Tax=Borrelia RepID=B5RLS9_BORDL 162 6e-38 UniRef50_C0W129 DNA helicase n=1 Tax=Actinomyces coleocanis DSM ... 162 6e-38 UniRef50_A0AL18 ATP-dependent helicase/nuclease subunit A n=3 Ta... 162 6e-38 UniRef50_B1I493 ATP-dependent helicase/nuclease subunit A n=1 Ta... 162 6e-38 UniRef50_A5DGH7 Putative uncharacterized protein n=2 Tax=Pichia ... 162 7e-38 UniRef50_Q6KHF3 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mo... 162 8e-38 UniRef50_Q30SL2 UvrD/REP helicase n=12 Tax=Epsilonproteobacteria... 162 9e-38 UniRef50_D2PY24 ATP-dependent nuclease subunit B-like protein n=... 162 1e-37 UniRef50_C0QTS0 Putative UvrD/REP helicase n=1 Tax=Persephonella... 162 1e-37 UniRef50_Q04GY8 ATP-dependent helicase/deoxyribonuclease subunit... 162 1e-37 UniRef50_C4Z484 DNA helicase II / ATP-dependent DNA helicase Pcr... 161 1e-37 UniRef50_C7GZ83 Putative ATP-dependent exoDNAse beta subunit n=1... 161 1e-37 UniRef50_C7NJY7 DNA/RNA helicase, superfamily I n=1 Tax=Kytococc... 161 1e-37 UniRef50_B2UU61 Rep helicase, single-stranded DNA-dependent ATPa... 161 2e-37 UniRef50_C5NXT8 Putative uncharacterized protein n=1 Tax=Gemella... 161 2e-37 UniRef50_Q2RLV0 UvrD/REP helicase n=2 Tax=cellular organisms Rep... 161 2e-37 UniRef50_B5EW84 ATP-dependent DNA helicase Rep n=1 Tax=Vibrio fi... 160 2e-37 UniRef50_A3CVM7 UvrD/REP helicase n=1 Tax=Methanoculleus marisni... 160 2e-37 UniRef50_A5KSD5 UvrD/REP helicase n=2 Tax=candidate division TM7... 160 2e-37 UniRef50_C1XZD7 DNA/RNA helicase, superfamily I n=1 Tax=Meiother... 160 3e-37 UniRef50_C1A6C2 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas ... 160 4e-37 UniRef50_C8Q3Z5 UvrD/REP helicase n=2 Tax=Proteobacteria RepID=C... 159 5e-37 UniRef50_UPI0000F51769 UvrD/REP helicase n=1 Tax=Ferroplasma aci... 159 5e-37 UniRef50_A6CGD0 ATP-dependent DNA helicase n=1 Tax=Planctomyces ... 159 6e-37 UniRef50_C8RQU9 ATP-dependent DNA helicase II n=2 Tax=Corynebact... 159 6e-37 UniRef50_B2IQB2 DNA-dependent ATPase I and helicase II n=4 Tax=B... 159 6e-37 UniRef50_A7HKZ3 UvrD/REP helicase n=4 Tax=Thermotogaceae RepID=A... 159 6e-37 UniRef50_C4G2E3 Putative uncharacterized protein n=1 Tax=Abiotro... 159 7e-37 UniRef50_B9DZK4 ATP-dependent helicase/nuclease subunit A n=13 T... 159 7e-37 UniRef50_B7J2J0 Exodeoxyribonuclease V, gamma chain n=26 Tax=Bor... 159 7e-37 UniRef50_A3EU22 Putative ATP-dependent DNA helicase, UvrD/REP fa... 159 7e-37 UniRef50_C7RGF9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7R... 158 8e-37 UniRef50_A6TVN2 ATP-dependent helicase/nuclease subunit A n=2 Ta... 158 8e-37 UniRef50_A5DZQ5 Putative uncharacterized protein n=1 Tax=Loddero... 158 8e-37 UniRef50_Q1WRS0 ATP-dependent helicase/nuclease subunit A n=3 Ta... 158 1e-36 UniRef50_Q6FLH1 Strain CBS138 chromosome L complete sequence n=1... 158 1e-36 UniRef50_A5ZAT8 Putative uncharacterized protein n=1 Tax=Eubacte... 158 2e-36 UniRef50_B2JFG2 UvrD/REP helicase n=33 Tax=Proteobacteria RepID=... 158 2e-36 UniRef50_C8WQE1 UvrD/REP helicase n=1 Tax=Alicyclobacillus acido... 157 2e-36 UniRef50_C0Z545 ATP-dependent nuclease subunit A n=1 Tax=Breviba... 157 2e-36 UniRef50_UPI0001788A90 UvrD/REP helicase n=1 Tax=Geobacillus sp.... 157 2e-36 UniRef50_UPI000185BEF4 helicase, uvrd/rep family n=1 Tax=Coryneb... 157 3e-36 UniRef50_A7HA18 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID... 157 3e-36 UniRef50_C6LEN7 ATP-dependent helicase PcrA n=2 Tax=Clostridiale... 157 3e-36 UniRef50_C5VUD6 UvrD/REP helicase n=1 Tax=Clostridium phage D-18... 157 3e-36 UniRef50_C5VEC7 Helicase, uvrd/rep family n=2 Tax=Corynebacteriu... 157 3e-36 UniRef50_C6J3M4 UvrD/REP helicase n=2 Tax=Paenibacillus sp. oral... 157 4e-36 UniRef50_D1BXK8 UvrD/REP helicase n=1 Tax=Xylanimonas cellulosil... 156 4e-36 UniRef50_C1F7R1 ATP-dependent DNA helicase, UvrD/REP family n=1 ... 156 4e-36 UniRef50_C6B123 Double-strand break repair protein AddB n=19 Tax... 156 5e-36 UniRef50_B0MQS7 Putative uncharacterized protein n=1 Tax=Eubacte... 156 5e-36 UniRef50_Q8RCZ0 ATP-dependent helicase/nuclease subunit A n=3 Ta... 156 5e-36 UniRef50_B8I7B7 UvrD/REP helicase n=2 Tax=Clostridium RepID=B8I7... 156 6e-36 UniRef50_Q027B8 ATP-dependent nuclease subunit B-like protein n=... 155 6e-36 UniRef50_Q2B8I4 ATP-dependent DNA helicase, UvrD/REP family prot... 155 7e-36 UniRef50_B1C9D6 Putative uncharacterized protein n=1 Tax=Anaerof... 155 7e-36 UniRef50_A4ALD4 ATP-dependent DNA helicase n=1 Tax=marine actino... 155 7e-36 UniRef50_B8HBQ6 UvrD/REP helicase n=1 Tax=Arthrobacter chlorophe... 155 7e-36 UniRef50_C2BJG0 Helicase n=5 Tax=Corynebacterium RepID=C2BJG0_9CORY 155 1e-35 UniRef50_UPI00016B20DB DNA-dependent ATPase I and helicase II n=... 155 1e-35 UniRef50_Q67RU7 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 155 1e-35 UniRef50_B2T5W9 UvrD/REP helicase n=37 Tax=Proteobacteria RepID=... 154 1e-35 UniRef50_Q0BZ49 UvrD/REP helicase domain protein n=2 Tax=Rhodoba... 154 2e-35 UniRef50_Q2SYL0 Superfamily I DNA and RNA helicases n=2 Tax=Burk... 154 2e-35 UniRef50_C1PCZ8 UvrD/REP helicase n=1 Tax=Bacillus coagulans 36D... 154 2e-35 UniRef50_B1XR08 ATP-dependent nuclease subunit A n=1 Tax=Synecho... 154 2e-35 UniRef50_Q73RK3 ATP-dependent DNA helicase, UvrD/Rep family n=2 ... 154 2e-35 UniRef50_C1ZID4 DNA/RNA helicase, superfamily I n=1 Tax=Planctom... 154 2e-35 UniRef50_A8VW69 Phospholipase D/Transphosphatidylase n=1 Tax=Bac... 154 2e-35 UniRef50_B6G1B8 Putative uncharacterized protein n=1 Tax=Clostri... 153 2e-35 UniRef50_A4W0M6 ATP-dependent helicase/deoxyribonuclease subunit... 153 3e-35 UniRef50_A4W0M7 ATP-dependent helicase/nuclease subunit A n=61 T... 153 3e-35 UniRef50_A7VW13 Putative uncharacterized protein n=4 Tax=Clostri... 153 3e-35 UniRef50_B8DM59 UvrD/REP helicase n=5 Tax=Bacteria RepID=B8DM59_... 153 4e-35 UniRef50_C4GBK5 Putative uncharacterized protein n=1 Tax=Shuttle... 153 4e-35 UniRef50_B1YKM8 ATP-dependent helicase/nuclease subunit A n=1 Ta... 153 5e-35 UniRef50_B1YKK3 UvrD/REP helicase n=1 Tax=Exiguobacterium sibiri... 153 5e-35 UniRef50_A3DE23 UvrD/REP helicase n=3 Tax=Clostridium thermocell... 153 5e-35 UniRef50_Q331U3 Putative ATP-dependent DNA helicase n=1 Tax=Clos... 153 5e-35 UniRef50_C8NWA9 ATP-dependent DNA helicase n=1 Tax=Corynebacteri... 153 5e-35 UniRef50_A3Z091 Putative ATP-dependent DNA helicase (PcrA) n=1 T... 153 5e-35 UniRef50_C8RQU8 ATP-dependent DNA helicase II n=3 Tax=Corynebact... 152 7e-35 UniRef50_Q1GAB0 ATP-dependent helicase/deoxyribonuclease subunit... 152 7e-35 UniRef50_Q2NB36 Helicase n=4 Tax=Sphingomonadales RepID=Q2NB36_E... 152 7e-35 UniRef50_C4ZAR0 ATP-dependent DNA helicase n=4 Tax=Clostridiales... 152 7e-35 UniRef50_B0CJK1 Double-strand break repair protein AddB n=44 Tax... 152 7e-35 UniRef50_A3TGM2 Putative ATP-dependent DNA helicase n=1 Tax=Jani... 152 7e-35 UniRef50_A2RH77 ATP-dependent helicase/nuclease subunit A n=4 Ta... 152 7e-35 UniRef50_B0NBE0 Putative uncharacterized protein n=9 Tax=Clostri... 152 9e-35 UniRef50_C6PW57 UvrD/REP helicase n=1 Tax=Clostridium carboxidiv... 152 9e-35 UniRef50_C8NLR2 Helicase n=5 Tax=Corynebacterium RepID=C8NLR2_COREF 152 1e-34 UniRef50_UPI0001C4301D ATP-dependent nuclease subunit A n=1 Tax=... 152 1e-34 UniRef50_Q3AA35 ATP-dependent helicase/nuclease subunit A n=1 Ta... 152 1e-34 UniRef50_B3WEJ1 ATP-dependent helicase/nuclease subunit A n=8 Ta... 152 1e-34 UniRef50_A1VQ25 UvrD/REP helicase n=1 Tax=Polaromonas naphthalen... 151 1e-34 UniRef50_B2I385 Superfamily I DNA and RNA helicase n=17 Tax=Acin... 151 1e-34 UniRef50_C6JEU5 Putative uncharacterized protein n=1 Tax=Ruminoc... 151 2e-34 UniRef50_C6CTT6 Recombination helicase AddA n=2 Tax=Firmicutes R... 151 2e-34 UniRef50_C1ZK16 ATP-dependent exonuclease V beta subunit, helica... 151 2e-34 UniRef50_B1VFC4 Putative ATP-dependent DNA helicase II n=1 Tax=C... 151 2e-34 UniRef50_B9ZQQ0 UvrD/REP helicase n=1 Tax=Thioalkalivibrio sp. K... 150 2e-34 UniRef50_Q2S4M5 Probable ATP-dependent DNA helicase n=1 Tax=Sali... 150 2e-34 UniRef50_C5CHI0 Exodeoxyribonuclease V n=1 Tax=Kosmotoga olearia... 150 2e-34 UniRef50_A7VJ43 Putative uncharacterized protein n=1 Tax=Clostri... 150 3e-34 UniRef50_B6R280 Double-strand break repair protein AddB n=1 Tax=... 150 3e-34 UniRef50_B5Y6N2 ATP-dependent DNA helicase PcrA n=1 Tax=Coprothe... 150 3e-34 UniRef50_Q97JY0 ATP-dependent DNA helicase, uvrD-like n=1 Tax=Cl... 150 3e-34 UniRef50_C0GDI3 Recombination helicase AddA n=1 Tax=Dethiobacter... 149 5e-34 UniRef50_C8PAK3 ATP-dependent exonuclease subunit B n=1 Tax=Lact... 149 5e-34 UniRef50_Q88U41 ATP-dependent helicase/nuclease subunit A n=3 Ta... 149 6e-34 UniRef50_B0RA36 Putative helicase n=1 Tax=Halobacterium salinaru... 149 6e-34 UniRef50_A0PZA6 Superfamily I DNA helicase (Rep-like helicase) n... 149 6e-34 UniRef50_A6LPC4 ATP-dependent helicase/nuclease subunit A n=4 Ta... 149 6e-34 UniRef50_B5VVV8 UvrD/REP helicase n=2 Tax=Arthrospira RepID=B5VV... 148 9e-34 UniRef50_Q1JCJ8 ATP-dependent helicase/nuclease subunit A n=14 T... 148 9e-34 UniRef50_C6MIZ6 TonB box domain protein n=1 Tax=Nitrosomonas sp.... 148 1e-33 UniRef50_A8SJB2 Putative uncharacterized protein n=1 Tax=Parvimo... 148 1e-33 UniRef50_Q18AN9 ATP-dependent helicase/nuclease subunit A n=7 Ta... 148 1e-33 UniRef50_C0EV13 Putative uncharacterized protein n=1 Tax=Eubacte... 148 1e-33 UniRef50_Q31P32 Putative uncharacterized protein n=2 Tax=Synecho... 148 1e-33 UniRef50_A2ST33 UvrD/REP helicase n=1 Tax=Methanocorpusculum lab... 148 2e-33 UniRef50_C5E0S5 ZYRO0G15224p n=1 Tax=Zygosaccharomyces rouxii Re... 148 2e-33 UniRef50_A6NVW3 Putative uncharacterized protein n=1 Tax=Bactero... 148 2e-33 UniRef50_A7VXH9 Putative uncharacterized protein n=1 Tax=Clostri... 147 2e-33 UniRef50_C8WFT5 Double-strand break repair protein AddB n=3 Tax=... 147 2e-33 UniRef50_C0QYG3 UvrD/REP helicase n=3 Tax=Brachyspira RepID=C0QY... 147 2e-33 UniRef50_Q2IGD2 Putative uncharacterized protein n=3 Tax=Anaerom... 147 2e-33 UniRef50_A7NRM2 UvrD/REP helicase n=2 Tax=Roseiflexus RepID=A7NR... 147 2e-33 UniRef50_Q043G6 ATP-dependent helicase/nuclease subunit A n=25 T... 147 2e-33 UniRef50_C0WLM5 ATP-dependent deoxyribonuclease, subunit A n=3 T... 147 2e-33 UniRef50_A6WGC8 UvrD/REP helicase n=1 Tax=Kineococcus radiotoler... 147 2e-33 UniRef50_A5HYY0 ATP-dependent helicase/nuclease subunit A n=11 T... 147 2e-33 UniRef50_A0PR95 ATP-dependent DNA helicase n=32 Tax=Mycobacteriu... 147 3e-33 UniRef50_B5CQ86 Putative uncharacterized protein n=1 Tax=Ruminoc... 147 3e-33 UniRef50_C0FWK5 Putative uncharacterized protein n=1 Tax=Rosebur... 147 3e-33 UniRef50_A5Z389 Putative uncharacterized protein n=1 Tax=Eubacte... 147 3e-33 UniRef50_A6CVP4 UvrD/REP helicase n=1 Tax=Vibrio shilonii AK1 Re... 147 3e-33 UniRef50_B2KE90 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum... 147 3e-33 UniRef50_C4G1J5 Putative uncharacterized protein n=1 Tax=Abiotro... 147 3e-33 UniRef50_C8PM70 ATP-dependent DNA helicase, UvrD/Rep family n=1 ... 147 3e-33 UniRef50_B5E4P4 ATP-dependent helicase/deoxyribonuclease subunit... 147 3e-33 UniRef50_UPI000169433B UvrD/REP helicase n=1 Tax=Paenibacillus l... 147 4e-33 UniRef50_D1PLS4 Putative ATP-dependent nuclease subunit B n=1 Ta... 147 4e-33 UniRef50_A6BJ96 Putative uncharacterized protein n=5 Tax=Clostri... 146 5e-33 UniRef50_C7NJY8 DNA/RNA helicase, superfamily I n=1 Tax=Kytococc... 146 6e-33 UniRef50_A0JYL6 UvrD/REP helicase n=3 Tax=cellular organisms Rep... 146 6e-33 UniRef50_A6LT39 UvrD/REP helicase n=18 Tax=Clostridium RepID=A6L... 145 7e-33 UniRef50_A6P133 Putative uncharacterized protein n=1 Tax=Bactero... 145 1e-32 UniRef50_C7XXL2 Recombination helicase AddA n=1 Tax=Lactobacillu... 145 1e-32 UniRef50_Q6CK19 KLLA0F14256p n=1 Tax=Kluyveromyces lactis RepID=... 145 1e-32 UniRef50_UPI0001789963 recombination helicase AddA n=1 Tax=Geoba... 144 1e-32 UniRef50_B2GEY4 ATP-dependent helicase/nuclease subunit A n=3 Ta... 144 2e-32 UniRef50_D1VUK5 UvrD/REP helicase n=1 Tax=Peptoniphilus lacrimal... 144 2e-32 UniRef50_A8SI09 Putative uncharacterized protein n=2 Tax=Faecali... 144 2e-32 UniRef50_Q897M0 ATP-dependent nuclease subunit A n=1 Tax=Clostri... 144 2e-32 UniRef50_B4S6V4 UvrD/REP helicase n=2 Tax=Bacteroidetes/Chlorobi... 144 2e-32 UniRef50_Q1Q4K9 Similar to ATP-dependent DNA helicase subunit Ad... 144 2e-32 UniRef50_C4V2E5 ATP-dependent deoxyribonuclease subunit A n=2 Ta... 144 2e-32 UniRef50_C4Z991 DNA helicase II n=1 Tax=Eubacterium rectale ATCC... 143 3e-32 UniRef50_UPI0001BC38AF DNA helicase II / ATP-dependent DNA helic... 143 3e-32 UniRef50_D2B0K9 Superfamily I DNA and RNA helicase-like protein ... 143 3e-32 UniRef50_B6WA25 Putative uncharacterized protein n=1 Tax=Anaeroc... 143 3e-32 UniRef50_B2A610 ATP-dependent helicase/nuclease subunit A n=1 Ta... 143 3e-32 UniRef50_A6CDV2 ATP-dependent deoxyribonuclease subunit B n=1 Ta... 143 3e-32 UniRef50_A4WWS4 RecB family exonuclease-like protein n=41 Tax=Pr... 143 4e-32 UniRef50_A8STY9 Putative uncharacterized protein n=1 Tax=Coproco... 143 4e-32 UniRef50_C0XV86 Helicase n=1 Tax=Corynebacterium lipophiloflavum... 143 5e-32 UniRef50_Q0G5V0 Helicase, UvrD/Rep family protein n=2 Tax=Aurant... 143 5e-32 UniRef50_C5BZ31 UvrD/REP helicase n=1 Tax=Beutenbergia cavernae ... 143 5e-32 UniRef50_UPI000196B4E2 hypothetical protein CATMIT_00994 n=1 Tax... 143 5e-32 UniRef50_UPI0001AF17D7 superfamily I DNA/RNA helicase n=1 Tax=St... 143 5e-32 UniRef50_UPI0001AEBA9E UvrD/REP helicase n=1 Tax=Alteromonas mac... 142 6e-32 UniRef50_Q5YR01 Putative helicase n=4 Tax=Corynebacterineae RepI... 142 6e-32 UniRef50_C7GAA3 ATP-dependent nuclease subunit A n=2 Tax=Rosebur... 142 6e-32 UniRef50_UPI0001C36633 recombination helicase AddA n=1 Tax=Clost... 142 7e-32 UniRef50_UPI00016C0036 Recombination helicase AddA n=1 Tax=Epulo... 142 7e-32 UniRef50_B0NWV2 Putative uncharacterized protein n=2 Tax=Clostri... 142 7e-32 UniRef50_A6BJS6 Putative uncharacterized protein n=1 Tax=Dorea l... 142 8e-32 UniRef50_C0CLZ2 Putative uncharacterized protein n=2 Tax=Clostri... 142 8e-32 UniRef50_Q0TV46 ATP-dependent helicase/nuclease subunit A n=12 T... 142 1e-31 UniRef50_C0CXS0 Putative uncharacterized protein (Fragment) n=1 ... 142 1e-31 UniRef50_Q03D71 ATP-dependent helicase/nuclease subunit A n=1 Ta... 142 1e-31 UniRef50_B7PH97 Uvrd / recb / pcra DNA helicase, putative n=1 Ta... 142 1e-31 UniRef50_D2EH37 Recombination helicase AddA n=1 Tax=Pediococcus ... 142 1e-31 UniRef50_B6WA23 Putative uncharacterized protein n=1 Tax=Anaeroc... 141 1e-31 UniRef50_B0CJK2 Double-strand break repair helicase AddA n=35 Ta... 141 1e-31 UniRef50_A8U8N0 Exonuclease RexA n=3 Tax=Lactobacillales RepID=A... 141 1e-31 UniRef50_A4IKW7 ATP-dependent helicase/nuclease subunit A n=94 T... 141 1e-31 UniRef50_Q2SKI4 UvrD/REP helicase family protein n=1 Tax=Hahella... 141 2e-31 UniRef50_C4LK54 Putative ATP-dependent DNA helicase II n=1 Tax=C... 141 2e-31 UniRef50_C6QAP5 Double-strand break repair protein AddB n=1 Tax=... 141 2e-31 UniRef50_A5V9S0 Double-strand break repair protein AddB n=2 Tax=... 141 2e-31 UniRef50_Q03NA7 ATP-dependent helicase/nuclease subunit A n=1 Ta... 141 2e-31 UniRef50_Q897P0 DNA helicase II n=1 Tax=Clostridium tetani RepID... 141 2e-31 UniRef50_UPI0001C314BA ATP-dependent nuclease subunit B-like pro... 140 2e-31 UniRef50_B7J885 ATP-dependent DNA helicase, UvrD/REP family n=1 ... 140 2e-31 UniRef50_UPI0001C352F6 UvrD/REP helicase n=1 Tax=Clostridium hat... 140 2e-31 UniRef50_C5B538 Putative DNA helicase II n=1 Tax=Methylobacteriu... 140 2e-31 UniRef50_A9VDB1 Predicted protein n=1 Tax=Monosiga brevicollis R... 140 3e-31 UniRef50_C0FS43 Putative uncharacterized protein n=1 Tax=Rosebur... 140 3e-31 UniRef50_C5C3C7 ATP-dependent nuclease subunit B-like protein n=... 140 3e-31 UniRef50_Q83G17 Putative DNA helicase II n=2 Tax=Tropheryma whip... 140 3e-31 UniRef50_C8W759 UvrD/REP helicase n=1 Tax=Atopobium parvulum DSM... 140 3e-31 UniRef50_C9LTM8 ATP-dependent nuclease subunit A n=1 Tax=Selenom... 140 3e-31 UniRef50_Q6G1D2 Putative uncharacterized protein n=1 Tax=Bartone... 140 4e-31 UniRef50_Q0ATK6 Putative uncharacterized protein n=2 Tax=Hyphomo... 140 4e-31 UniRef50_A7BEI5 Putative uncharacterized protein n=1 Tax=Actinom... 140 4e-31 UniRef50_B8FXD7 ATP-dependent helicase/nuclease subunit A n=2 Ta... 140 4e-31 UniRef50_Q67MD5 ATP-dependent helicase/nuclease subunit A n=1 Ta... 139 5e-31 UniRef50_UPI000050F874 UvrD/REP helicase n=1 Tax=Brevibacterium ... 139 6e-31 UniRef50_Q38X69 ATP-dependent helicase/nuclease subunit A n=1 Ta... 139 6e-31 UniRef50_Q4PDX2 Putative uncharacterized protein n=1 Tax=Ustilag... 139 7e-31 UniRef50_B9ZA08 UvrD/REP helicase n=1 Tax=Natrialba magadii ATCC... 138 8e-31 UniRef50_B6JCP8 Double-strand break repair protein AddB n=15 Tax... 138 8e-31 UniRef50_Q02D21 ATP-dependent nuclease subunit B-like protein n=... 138 1e-30 UniRef50_B5CL82 Putative uncharacterized protein n=3 Tax=Clostri... 138 1e-30 UniRef50_A9KTE6 ATP-dependent helicase/nuclease subunit A n=1 Ta... 138 1e-30 UniRef50_A6WX35 Double-strand break repair helicase AddA n=11 Ta... 138 2e-30 UniRef50_C6AB51 Double-strand break repair helicase AddA n=5 Tax... 138 2e-30 UniRef50_B1MZM2 ATP-dependent helicase/nuclease subunit A n=3 Ta... 138 2e-30 UniRef50_C0QS88 Putative uncharacterized protein n=1 Tax=Perseph... 137 2e-30 UniRef50_B7AS99 Putative uncharacterized protein n=1 Tax=Bactero... 137 2e-30 UniRef50_Q3SWM3 DNA helicase/exodeoxyribonuclease V, subunit A n... 137 2e-30 UniRef50_C6XFZ3 Double-strand break repair protein AddB n=1 Tax=... 137 2e-30 UniRef50_A3YTS6 ATP-depentend DNA helicase n=1 Tax=Synechococcus... 137 2e-30 UniRef50_C7MLK4 ATP-dependent exonuclase V beta subunit, helicas... 137 2e-30 UniRef50_C0WBY1 Predicted protein n=1 Tax=Acidaminococcus sp. D2... 137 3e-30 UniRef50_C6XP89 UvrD/REP helicase n=7 Tax=Proteobacteria RepID=C... 137 3e-30 UniRef50_A6GVZ8 Putative uncharacterized protein n=3 Tax=Flavoba... 137 3e-30 UniRef50_C7JGX2 DNA helicase II UvrD/Rep n=11 Tax=Acetobacterace... 137 3e-30 UniRef50_Q1YTF0 UvrD/REP helicase family protein n=1 Tax=gamma p... 137 3e-30 UniRef50_Q2FUG2 ATP-dependent nuclease subunit B-like n=1 Tax=Me... 137 3e-30 UniRef50_A5VHK2 ATP-dependent helicase/nuclease subunit A n=10 T... 137 4e-30 UniRef50_B8FB94 Exodeoxyribonuclease V, beta subunit n=1 Tax=Des... 136 6e-30 UniRef50_Q28JY0 Putative uncharacterized protein n=1 Tax=Jannasc... 136 6e-30 UniRef50_C2HA17 UvrD Rep family helicase n=12 Tax=Enterococcus f... 135 7e-30 UniRef50_C5RQN8 Recombination helicase AddA n=1 Tax=Clostridium ... 135 7e-30 UniRef50_B0PD60 Putative uncharacterized protein n=1 Tax=Anaerot... 135 8e-30 UniRef50_C1XIE9 DNA/RNA helicase, superfamily I n=1 Tax=Meiother... 135 8e-30 UniRef50_D1C5W8 UvrD/REP helicase n=1 Tax=Sphaerobacter thermoph... 135 1e-29 UniRef50_Q0G5V1 Putative uncharacterized protein n=2 Tax=Auranti... 135 1e-29 UniRef50_C7R1Q7 UvrD/REP helicase n=1 Tax=Jonesia denitrificans ... 135 1e-29 UniRef50_C8X833 UvrD/REP helicase n=1 Tax=Nakamurella multiparti... 135 1e-29 UniRef50_A8RRN8 Putative uncharacterized protein n=4 Tax=Bacteri... 135 1e-29 UniRef50_C4FGD5 Putative uncharacterized protein n=1 Tax=Bifidob... 135 1e-29 UniRef50_A5ZW44 Putative uncharacterized protein n=2 Tax=Clostri... 135 1e-29 UniRef50_A6L5X5 Putative uncharacterized protein n=19 Tax=Bacter... 135 1e-29 UniRef50_C7RHW7 UvrD/REP helicase n=4 Tax=Anaerococcus RepID=C7R... 134 1e-29 UniRef50_A3VPE1 Putative uncharacterized protein n=1 Tax=Parvula... 134 1e-29 UniRef50_C0VQH4 Helicase n=2 Tax=Corynebacterium glucuronolyticu... 134 2e-29 UniRef50_Q5KJH7 ATP-dependent DNA helicase pcra, putative n=2 Ta... 134 2e-29 UniRef50_D0WNM3 ATP-dependent DNA helicase n=1 Tax=Actinomyces s... 134 2e-29 UniRef50_B8IZF9 UvrD/REP helicase n=1 Tax=Desulfovibrio desulfur... 134 2e-29 UniRef50_C9KJP8 ATP-dependent nuclease subunit A n=1 Tax=Mitsuok... 134 2e-29 UniRef50_C8P261 Putative uncharacterized protein n=1 Tax=Erysipe... 134 2e-29 UniRef50_P75437 Probable DNA helicase II homolog n=3 Tax=Mycopla... 134 2e-29 UniRef50_B9Y4V4 Putative uncharacterized protein n=1 Tax=Holdema... 133 3e-29 UniRef50_UPI0001C41A07 ATP-dependent DNA helicase UvrD/REP famil... 133 3e-29 UniRef50_Q21J64 DNA helicase/exodeoxyribonuclease V, subunit A n... 133 3e-29 UniRef50_D2BGG8 UvrD/REP helicase n=2 Tax=Bacteria RepID=D2BGG8_... 133 3e-29 UniRef50_D0BK91 ATP-dependent nuclease subunit A n=2 Tax=Granuli... 133 3e-29 UniRef50_O26611 DNA helicase II n=1 Tax=Methanothermobacter ther... 133 4e-29 UniRef50_Q1D938 Putative uncharacterized protein n=2 Tax=Cystoba... 133 4e-29 UniRef50_A8U0G7 Inactivated superfamily I helicase n=1 Tax=alpha... 133 4e-29 UniRef50_A7HPC8 Double-strand break repair helicase AddA n=1 Tax... 133 4e-29 UniRef50_C6P6T0 UvrD/REP helicase n=1 Tax=Sideroxydans lithotrop... 133 4e-29 UniRef50_C8WGH3 UvrD/REP helicase n=1 Tax=Eggerthella lenta DSM ... 133 5e-29 UniRef50_C4G8V9 Putative uncharacterized protein n=1 Tax=Shuttle... 133 5e-29 UniRef50_C0BDK3 Putative uncharacterized protein n=1 Tax=Coproco... 133 5e-29 UniRef50_Q2SPC8 Superfamily I DNA and RNA helicase n=4 Tax=Gamma... 133 5e-29 UniRef50_B8DL18 UvrD/REP helicase n=1 Tax=Desulfovibrio vulgaris... 133 5e-29 UniRef50_A1A303 Widely conserved ATP-dependent DNA helicase n=9 ... 133 5e-29 UniRef50_B0MQS6 Putative uncharacterized protein n=1 Tax=Eubacte... 133 5e-29 UniRef50_B8HWJ9 UvrD/REP helicase n=1 Tax=Cyanothece sp. PCC 742... 133 6e-29 UniRef50_A5CQ87 Putative ATP-dependant DNA helicase/nuclease n=2... 132 6e-29 UniRef50_C7MBM5 DNA/RNA helicase, superfamily I n=1 Tax=Brachyba... 132 6e-29 UniRef50_A5TXD7 ATP-dependent DNA helicase n=8 Tax=Fusobacterium... 132 6e-29 UniRef50_C4L3Q8 Recombination helicase AddA n=1 Tax=Exiguobacter... 132 9e-29 UniRef50_Q6AFN4 ATP-dependent DNA helicase n=2 Tax=Actinomycetal... 132 1e-28 UniRef50_Q1W555 UvrD/REP family helicase n=1 Tax=Pseudomonas aer... 132 1e-28 UniRef50_C7HA04 ATP-dependent exoDNAse beta subunit n=1 Tax=Faec... 132 1e-28 UniRef50_C8WFT6 Double-strand break repair helicase AddA n=3 Tax... 132 1e-28 UniRef50_A5Z8R6 Putative uncharacterized protein n=1 Tax=Eubacte... 132 1e-28 UniRef50_Q2YB41 DNA helicase/exodeoxyribonuclease V, subunit A n... 132 1e-28 UniRef50_A2ST32 ATP-dependent nuclease subunit B-like protein n=... 131 1e-28 UniRef50_D1BPN9 Recombination helicase AddA n=3 Tax=Veillonella ... 131 1e-28 UniRef50_B5GJN9 ATP-dependent DNA helicase n=2 Tax=Streptomyces ... 131 1e-28 UniRef50_UPI0001C37CA2 recombination helicase AddA n=1 Tax=Rumin... 131 2e-28 UniRef50_A2RH76 ATP-dependent helicase/deoxyribonuclease subunit... 131 2e-28 UniRef50_Q04AN7 ATP-dependent helicase/nuclease subunit A n=3 Ta... 131 2e-28 UniRef50_B7IZB5 Helicase, UvrD/Rep family n=5 Tax=Bacillus cereu... 130 2e-28 UniRef50_Q4L4Y3 ATP-dependent helicase/nuclease subunit A n=65 T... 130 2e-28 UniRef50_C7RA34 Putative uncharacterized protein n=1 Tax=Kangiel... 130 2e-28 UniRef50_B0MLR5 Putative uncharacterized protein n=1 Tax=Eubacte... 130 2e-28 UniRef50_Q1GX41 UvrD/REP helicase n=1 Tax=Sphingopyxis alaskensi... 130 3e-28 UniRef50_C2KR62 UvrD/REP helicase n=2 Tax=Mobiluncus mulieris Re... 130 3e-28 UniRef50_D1C5W7 ATP-dependent nuclease subunit B-like protein n=... 130 3e-28 UniRef50_C0EHH1 Putative uncharacterized protein n=1 Tax=Clostri... 130 3e-28 UniRef50_C6P6S9 Putative uncharacterized protein n=1 Tax=Siderox... 130 3e-28 UniRef50_D2QPX2 Putative uncharacterized protein n=1 Tax=Spiroso... 130 3e-28 UniRef50_C3WKP8 DNA helicase II n=1 Tax=Fusobacterium sp. 2_1_31... 130 3e-28 UniRef50_B8N0A9 ATP-dependent DNA helicase, putative n=1 Tax=Asp... 130 4e-28 UniRef50_D0YYJ6 ATP-dependent DNA helicase PcrA n=5 Tax=Photobac... 130 4e-28 UniRef50_A3IAC3 DNA helicase II n=1 Tax=Bacillus sp. B14905 RepI... 130 4e-28 UniRef50_C8X4N8 Putative DNA repair protein n=1 Tax=Desulfohalob... 129 5e-28 UniRef50_A9M3L9 Exodeoxyribonuclease V beta subunit n=30 Tax=Nei... 129 5e-28 UniRef50_A8SMD3 Putative uncharacterized protein n=1 Tax=Parvimo... 129 5e-28 UniRef50_C5V6X1 DNA helicase/exodeoxyribonuclease V, subunit B n... 129 6e-28 UniRef50_C6QAP4 Double-strand break repair helicase AddA n=1 Tax... 129 7e-28 UniRef50_C3WAC5 DNA helicase II n=1 Tax=Fusobacterium mortiferum... 129 7e-28 UniRef50_C6P8R0 ATP-dependent nuclease subunit B-like protein n=... 129 7e-28 UniRef50_C0GSZ0 UvrD/REP helicase n=1 Tax=Desulfonatronospira th... 128 8e-28 UniRef50_Q1Q555 Similar to DNA helicase n=1 Tax=Candidatus Kuene... 128 1e-27 UniRef50_A5D1P3 ATP-dependent helicase/nuclease subunit A n=2 Ta... 128 1e-27 UniRef50_A9WPI7 ATP-dependent DNA helicase n=1 Tax=Renibacterium... 128 1e-27 UniRef50_A1VCM0 UvrD/REP helicase n=3 Tax=Desulfovibrio vulgaris... 128 1e-27 UniRef50_C8ZW81 UvrD/REP helicase n=4 Tax=Enterococcus RepID=C8Z... 128 1e-27 UniRef50_B2IGN3 Double-strand break repair protein AddB n=2 Tax=... 128 1e-27 UniRef50_C5DEJ8 KLTH0C09856p n=1 Tax=Lachancea thermotolerans CB... 128 1e-27 UniRef50_C1XFM8 ATP-dependent exonuclease V beta subunit, helica... 128 1e-27 UniRef50_Q5WEU2 ATP-dependent exoDNAse beta subunit n=1 Tax=Baci... 128 1e-27 UniRef50_C5RAZ6 ATP-dependent deoxyribonuclease, subunit A n=1 T... 128 1e-27 UniRef50_B8DWI6 UvrD/REP helicase n=4 Tax=Bifidobacterium animal... 128 1e-27 UniRef50_D1BAW6 DNA/RNA helicase, superfamily I n=1 Tax=Sanguiba... 128 2e-27 UniRef50_A7HPC7 Double-strand break repair protein AddB n=1 Tax=... 128 2e-27 UniRef50_B0S125 DNA helicase II n=2 Tax=Finegoldia magna RepID=B... 128 2e-27 UniRef50_Q6MIL6 Probable exonuclease RexA n=1 Tax=Bdellovibrio b... 128 2e-27 UniRef50_C1ZCN1 ATP-dependent nuclease, subunit B n=1 Tax=Planct... 127 2e-27 UniRef50_C9LQY5 ATP-dependent nuclease subunit A n=1 Tax=Dialist... 127 2e-27 UniRef50_C0GSZ1 Putative uncharacterized protein n=1 Tax=Desulfo... 127 2e-27 UniRef50_D1R7X5 Putative uncharacterized protein n=1 Tax=Parachl... 127 2e-27 UniRef50_B5CRL8 Putative uncharacterized protein n=1 Tax=Ruminoc... 127 2e-27 UniRef50_Q311L1 ATP-dependent DNA helicase, UvrD/REP family n=1 ... 127 2e-27 UniRef50_Q5CVQ2 UvrD like super family I helicase involved in nu... 127 3e-27 UniRef50_Q836J8 ATP-dependent helicase/nuclease subunit A n=35 T... 127 3e-27 UniRef50_C6IZE1 Recombination helicase AddA n=1 Tax=Paenibacillu... 127 3e-27 UniRef50_D2RKU2 ATP-dependent nuclease subunit B-like protein n=... 126 3e-27 UniRef50_Q0ATK5 DNA helicase/exodeoxyribonuclease V, subunit A n... 126 3e-27 UniRef50_Q2KX58 DNA helicase n=4 Tax=Proteobacteria RepID=Q2KX58... 126 4e-27 UniRef50_Q6APW2 Related to ATP-dependent DNA helicase II (Rep) n... 126 5e-27 UniRef50_B9XFA1 Recombination helicase AddA n=1 Tax=bacterium El... 126 5e-27 UniRef50_UPI0001C31915 UvrD/REP helicase n=1 Tax=Conexibacter wo... 126 5e-27 UniRef50_B9EAN8 Putative uncharacterized protein n=1 Tax=Macroco... 126 6e-27 UniRef50_C8SXN2 Exodeoxyribonuclease subunit V gamma (Fragment) ... 126 6e-27 UniRef50_B6XVB6 Putative uncharacterized protein n=2 Tax=Bifidob... 126 6e-27 UniRef50_D1PLS3 ATP-dependent deoxyribonuclease subunit A n=1 Ta... 126 7e-27 UniRef50_A7IDE0 UvrD/REP helicase n=2 Tax=Rhizobiales RepID=A7ID... 125 7e-27 UniRef50_A6P0W2 Putative uncharacterized protein n=2 Tax=Bacteri... 125 7e-27 UniRef50_B9CK51 UvrD/REP helicase n=1 Tax=Atopobium rimae ATCC 4... 125 8e-27 UniRef50_Q0A7Z8 UvrD/REP helicase n=1 Tax=Alkalilimnicola ehrlic... 125 8e-27 Sequences not found previously or not previously below threshold: >UniRef50_P07648 Exodeoxyribonuclease V gamma chain n=185 Tax=cellular organisms RepID=EX5C_ECOLI Length = 1122 Score = 821 bits (2119), Expect = 0.0, Method: Composition-based stats. Identities = 1122/1122 (100%), Positives = 1122/1122 (100%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI Sbjct: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD Sbjct: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG Sbjct: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF Sbjct: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL Sbjct: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR Sbjct: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP Sbjct: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA Sbjct: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA Sbjct: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL Sbjct: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN Sbjct: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL Sbjct: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL Sbjct: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF Sbjct: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR 900 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR Sbjct: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR 900 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ 960 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ Sbjct: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ 960 Query: 961 PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL 1020 PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL Sbjct: 961 PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL 1020 Query: 1021 SQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMM 1080 SQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMM Sbjct: 1021 SQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMM 1080 Query: 1081 VRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS 1122 VRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS Sbjct: 1081 VRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS 1122 >UniRef50_A6FE97 Putative exodeoxyribonuclease V n=1 Tax=Moritella sp. PE36 RepID=A6FE97_9GAMM Length = 1130 Score = 727 bits (1875), Expect = 0.0, Method: Composition-based stats. Identities = 492/1138 (43%), Positives = 673/1138 (59%), Gaps = 28/1138 (2%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +YHSN+LD+L+ LM + ++ L DPF E +LVQS GMAQW++M L++ GI+ANI Sbjct: 1 MFNLYHSNQLDILKELMAHFIAKDPLADPFVEEQVLVQSPGMAQWVKMELAKSMGISANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FPLPASFIW MF +VLP+IP +SAFNK++MSWKLM +LP+LL +F L+HYL DD D Sbjct: 61 TFPLPASFIWKMFQKVLPDIPDKSAFNKEAMSWKLMLILPELLVLAEFESLKHYLADDQD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 +LFQL K +D FDQYLVYRP+W+A WE G + WQ LW+ LV T LG Sbjct: 121 DYRLFQLCQKISDTFDQYLVYRPEWIAGWEGGD--NMHADTHPWQPLLWRELVAKTEVLG 178 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 Q +HRANLY +FI L S+T LP R+F+ G+SALPP YL ALQAL H EIH + Sbjct: 179 QSHYHRANLYDQFIARLNSSTFDAKLLPDRIFVFGVSALPPRYLDALQALAMHTEIHFML 238 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRR--HSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 +NPCR YWGD+ DP +L K T + + D + LF+ D VGNP Sbjct: 239 SNPCRLYWGDLIDPKWLLKQRTMVNHHNVTLGMSDKVSANDEQTVRALFDEDDAFKVGNP 298 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA----GVN 354 LLAS GKLGRD + LL+ QELD FV+ T D LL +IQ DIL+L +R++A Sbjct: 299 LLASMGKLGRDNLALLT-GFGCQELDVFVEPTDDGLLASIQRDILDLADRSMAEFNVSQQ 357 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 S K P++P DSS+ H CHSP RE+EVLH+ LL M E+P L PRD+++M+ D Sbjct: 358 DTNTRDSRYKLPINPADSSLELHSCHSPMREIEVLHNNLLTMFSENPDLNPRDVVIMMPD 417 Query: 415 IDSYSPFIQAVFGSAPA--DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 ++ YSP+IQAVFG+ +RY+P++ISD A+ +P+L +F+ LL+LP SR ++L+ Sbjct: 418 VNGYSPYIQAVFGAMDRYDERYIPFSISDSGAQYDNPILLSFLQLLTLPLSRCNVSELLS 477 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 LL+VP + ARF IT + LRQW++ESGIRWG+D+D+ +LP Q+TW FGL RML Sbjct: 478 LLEVPAVLARFAITPDEFNRLRQWIDESGIRWGLDEDDATRFDLPGMKQNTWLFGLHRML 537 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 LGYA +Q +LPY E G+ AEL+G LA + L L + + +W+ + Sbjct: 538 LGYAY-GGDDIYQGILPYQEVQGIEAELLGKLAHFIEALLDSLTSLQDPKSIADWIKLGN 596 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 +++ F+ D + E ++ +I + + + A Y + +LR L L Q SQ Sbjct: 597 TLIDNFYKIDVDDEQSIKMIRDAFSHLDEQLKSASYDKHITPLVLRHYLNNALSQVGASQ 656 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 +FLAG VN CTLMPMRSIPFKV+CLLGMNDGVYPR + P+GFDLM+ K+GDRSRRDDD Sbjct: 657 KFLAGQVNFCTLMPMRSIPFKVICLLGMNDGVYPRSIPPMGFDLMANDLKQGDRSRRDDD 716 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 RYLFLEALISAQ KLYISYIG SI+D SER PSVL+ EL+ Y QS + GDE L+ DES Sbjct: 717 RYLFLEALISAQSKLYISYIGSSIRDKSERLPSVLITELLQYCQQSFCITGDEGLSPDES 776 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHS----EFVQPLPFTL 828 A++ HL H PFD + + P S+A+EWLPA + + + Sbjct: 777 AAQLLTHLIQHHALQPFDARYFNPQAPTSFAKEWLPALAPVVELRQFLTEPLPALISNDD 836 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 + V L L RF+ HP + FF RL+V F ++ D EPF ++ L +Y + QLL Sbjct: 837 MQEVELAELLRFYRHPTKYFFNRRLKVYFNQASLDVLDDEPFDVDNLEKYHLKAQLLETE 896 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ-PGQSMEIDLAC 947 + D + R A+G LP G FG+I + + + QLA ++ +E+D+ Sbjct: 897 LMGGDISLVTERLVASGSLPLGRFGKISLDKEVSTVSQLAQVLMPLLTNSNDDIEVDIPL 956 Query: 948 NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFL----RKD 1003 ++ GWL + GL+R +PS + +Q+WLEHL +C S N + + K Sbjct: 957 VSGRLFGWLKHIYNGGLVRHKPSGFNGKDYLQVWLEHLCFCISIKNPAATTLVHLTAGKP 1016 Query: 1004 GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDST 1063 R + +A L QL E Y +G PL + P++G W KT Sbjct: 1017 VVQRLRVIDQSRARELLFQLFEVYNDGCCQPLALFPKTGWGWAKTKCT-------TAALD 1069 Query: 1064 LQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 K R + + +EG GE D + QR + +L E + + S+ L P+F + + Sbjct: 1070 DYKLRAEAVLNFEGGYNRMGENADDYLQRSFPRLNDEVYKLMSASSESVLFPIFEYLE 1127 >UniRef50_C4K849 Exonuclease V, gamma chain with recB and recD: 5' and 3' nuclease, ATPase, recombinase, helicase n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K849_HAMD5 Length = 1123 Score = 725 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 610/1128 (54%), Positives = 787/1128 (69%), Gaps = 29/1128 (2%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M YHSN+LD+L+ L ++E+E L +PF+ E+ILVQS GMAQWLQ+ L+Q GI+ANI Sbjct: 1 MFITYHSNQLDLLKTLTSTLIEKEPLKNPFQKEIILVQSPGMAQWLQIQLAQSLGISANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FPLPA+FIWDMF +VL IPKES FNK +M+WKLM LLP LL+ F ++HYL DD D Sbjct: 61 QFPLPATFIWDMFTKVLKNIPKESPFNKDAMTWKLMCLLPDLLQNPIFASIKHYLQDDED 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 K+K+ QL+ + ADLFDQYLVYR +WL WE G + L + Q WQA LW +L+ Y+ QL Sbjct: 121 KQKIHQLAIRIADLFDQYLVYRSEWLDGWENGKKFDDLNKNQDWQAALWVSLIRYSRQLE 180 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 QP WHRA LYQRFI+ L LP RVFI GIS LPP+YL+ L+AL +H++IH +F Sbjct: 181 QPEWHRARLYQRFIQALNKNDVDSDLLPKRVFIFGISTLPPIYLKGLEALSRHMDIHFMF 240 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NPCRY+WGDI++ LAKL + + E NPLL Sbjct: 241 NNPCRYFWGDIQNYDILAKLNIKNTSSDLRNIEEEQI-------------------NPLL 281 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 ASWG+LGRD++YLLS +E QE+ AFVD+ PDNLLH +Q D+LE +N E S Sbjct: 282 ASWGRLGRDHLYLLSQIEGLQEIHAFVDIEPDNLLHALQHDMLEFKN-QATRHFSESNSH 340 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + KR LD D SI H CHS QREVE+L D+LL + EDP LTPRD+IVMVADID+Y+P Sbjct: 341 HNKKRLLDINDRSIGVHSCHSQQREVEILQDQLLNLFSEDPALTPRDVIVMVADIDNYAP 400 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +IQAVF +A +RYLP+AISDR+ Q HPVL+ FI LL LP SRF SE VL LL++ L+ Sbjct: 401 YIQAVFSNASLERYLPFAISDRKMTQVHPVLQTFIKLLDLPQSRFSSEQVLGLLEISALS 460 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 +F+I E+ L LR+WV SGIRWG+D++NV++L LP TGQHTW+FGL RM LGYAM+S Sbjct: 461 QKFEIQEKELSLLREWVEGSGIRWGLDNENVQDLSLPITGQHTWQFGLKRMFLGYAMDSQ 520 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 G+W+ VLPYDES+GL AEL+G LA LLM L+IWR+ L R L EWLP+CRD+ AFF Sbjct: 521 AGDWEGVLPYDESTGLAAELIGKLARLLMMLSIWRKKLKTSRLLSEWLPLCRDLFYAFFE 580 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 +AETE+ LI+QQWQ II GL AQY + VP+SL+R +L R + +RISQRFLAGP+N Sbjct: 581 SNAETESIFILIDQQWQNIIQYGLSAQYANTVPVSLIRHDLVTRFENQRISQRFLAGPIN 640 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 CTLMPMRSIPFKVVCLLGMN+G+YPR L PLGFDLM++K ++GDRSRRDDDRYLFLEAL Sbjct: 641 FCTLMPMRSIPFKVVCLLGMNEGIYPRILPPLGFDLMAKKRQKGDRSRRDDDRYLFLEAL 700 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 +SAQQ LYISYIGRSIQDNS+R+PSVLV EL++YIG S+ LPGDE N DES ARV HL Sbjct: 701 LSAQQYLYISYIGRSIQDNSQRYPSVLVSELLEYIGNSYVLPGDENRNSDESMARVIQHL 760 Query: 781 TCLHTRMPFDPQNYQPGER-QSYAREWLPAA----SQAGKAHSEFVQPLPFTLPETVPLE 835 HTRMPF +N+ G QSYA EWL AA + + +F++PL + L+ Sbjct: 761 LFCHTRMPFSAKNFIKGTEQQSYAIEWLEAAKKHTQEQKQPQDDFIKPLVSEPFSEITLD 820 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE 895 L F+ HP++AFFQ+RL V FR E E+ + EPFIL L+RYQ N +LLNAL+EQ + + Sbjct: 821 ELINFYRHPIKAFFQLRLGVQFRVEQKELSNEEPFILAPLARYQFNTELLNALIEQKNVD 880 Query: 896 RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ--PGQSMEIDLACNGVQIT 953 +L+ R +A+G LP+G FGEI+W+ Q EM +A ++ +E++ ++ Sbjct: 881 QLYARMQASGRLPFGHFGEIYWQQQKNEMGLIAKKIQTETGHTEFCRLEVNTTLGERTLS 940 Query: 954 GWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAA 1013 GW+ Q DGL+RWRPS L++ G+ LW+EHL YC SGG GESR++ +K+ WRF L+ Sbjct: 941 GWIAHAQTDGLIRWRPSTLTIVDGLLLWIEHLAYCLSGGKGESRIYGKKESVWRFSALSQ 1000 Query: 1014 EQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQ 1073 +A +LS IEGY++GM PLL+L SG AWL CYD +N +L D+ T KA+ L Sbjct: 1001 SEAEQHLSLFIEGYQKGMIQPLLLLNHSGWAWLTKCYDLKNRHILWDEKTQAKAKDHLLT 1060 Query: 1074 AYEGNMMV--RGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRF 1119 ++GN RGEGDD + QRL+R + ++ I+++++ +LLP+ Sbjct: 1061 VFQGNPKTGVRGEGDDPYIQRLFRSINDTHVDRILQEAKNYLLPIAHH 1108 >UniRef50_D0ICS0 Exodeoxyribonuclease V gamma chain n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0ICS0_VIBHO Length = 1131 Score = 724 bits (1868), Expect = 0.0, Method: Composition-based stats. Identities = 513/1137 (45%), Positives = 705/1137 (62%), Gaps = 25/1137 (2%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M VYHSN+LD+L++L+ I++ + LD+PF+ E+ILVQS GMAQWL++ ++++ GIAAN+ Sbjct: 1 MFTVYHSNQLDLLKSLLVAIIQSKPLDNPFQKELILVQSPGMAQWLKLEMAKEQGIAANV 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +FPLPA+FIW MF ++L ++P+ S FNK++M+WKLMT+LP+ L+ DF LR YL D D Sbjct: 61 EFPLPATFIWQMFTQILDDVPQRSFFNKEAMTWKLMTVLPEKLDEPDFDELRRYLDGDDD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 ++KL+QL+ K AD++DQYLVYRP+W+ WE V+ L E + WQA LW+AL +YT QLG Sbjct: 121 QQKLYQLAGKIADIYDQYLVYRPEWIKAWENEQPVDELAEEKRWQAVLWQALYDYTLQLG 180 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLP--SRVFICGISALPPVYLQALQALGKHIEIHL 238 Q +HRANLY+ FI+ L S P GL RVF+ GISALPP YL AL+ALG+HI++H Sbjct: 181 QSPFHRANLYEEFIDVLSSHKEKPEGLQGIDRVFVFGISALPPRYLDALKALGEHIDVHY 240 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 +FTNPCRYYWGDI+D YLAK + A L D +VGN Sbjct: 241 MFTNPCRYYWGDIRDKRYLAKRAASMAPRISRASDTEEPAQF--ALPLMGEDDTAEVGNS 298 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 LLAS GKLGRD + L+S+L+ + FV+V D+LLH+IQ+DIL+L NI+E Sbjct: 299 LLASMGKLGRDNLLLISELQCHEVDQGFVEVPRDSLLHHIQADILDLVEP----ENIQET 354 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 S++K P+ D S+ VCHSP REVEVLHDRLL MLE DPTL+PRDIIVMVADI++Y Sbjct: 355 LTSESKLPVSADDRSLMVEVCHSPMREVEVLHDRLLDMLESDPTLSPRDIIVMVADINAY 414 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 SP IQAVFG+AP +R++P++ISDR A Q P+L F+ LLSLPDSR + ++L +L++P Sbjct: 415 SPAIQAVFGNAPGERFIPFSISDRTADQESPILTTFLRLLSLPDSRCSAAELLEILELPA 474 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 + +F ++ WV E+GIRWG+DD+ LP Q+TW FGL RMLLGYAM Sbjct: 475 VMRKFGFDNRQFEKVKLWVEEAGIRWGLDDNTASHFSLPHQHQNTWLFGLNRMLLGYAMP 534 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 S+ G + VL YDE GL AEL G L + + + L + E W+ + + Sbjct: 535 SSAGLYNDVLAYDEVQGLEAELAGKLGAFFRVMTATQTALLDTKNGEGWIQTLTSLFDDM 594 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 F D + E A LI Q + + A + + L ++RD L ++L ER+SQRFLAG Sbjct: 595 FALDTDEELAGQLIRTQLDNWLTQLDDAGFTQTLALPIVRDYLKEKLGGERVSQRFLAGQ 654 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 VN CTLMPMRSIPF+VVCLLGMNDG YPR +AP+GFDLM+ + + GDRSRRDDDRYLFLE Sbjct: 655 VNFCTLMPMRSIPFQVVCLLGMNDGDYPRTIAPVGFDLMAGRTRAGDRSRRDDDRYLFLE 714 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 AL SAQQ+LYISY+GRS+QDNSE+ PSVLV EL+DY Q + L GD++L ES R+ Sbjct: 715 ALQSAQQRLYISYVGRSVQDNSEKVPSVLVTELLDYCRQGYCLAGDQSLPEHESGQRLLG 774 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP----- 833 L + +PF Q + R+SYA EWLPAA G A + F+ + Sbjct: 775 TLVHHNPLVPFSKQAFSQ-NRRSYAAEWLPAARGEGHAAAPFLDGRALNPAPDLDIGVIE 833 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE--- 890 L LQRFW PV+ FF RL+V F + + + + EPF L+ L RYQ+ LL+ ++ Sbjct: 834 LAELQRFWRLPVQYFFNRRLKVFFESPEGAMEEAEPFALDNLRRYQLRDALLSHVMAKGD 893 Query: 891 -QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ-PGQSMEIDLAC- 947 + + F++ +A+G LP FGE+ E++ + R+ Q++EI+L Sbjct: 894 SEASLDAFFKQQKASGALPLSHFGELALESEQAGILAQYQRLKPMIADKRQALEINLTLV 953 Query: 948 ---NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDG 1004 V++ GWL + G + +R + + W++HL CA+ G F+ D Sbjct: 954 TSRGTVKLQGWLDERYRAGRILYRSGKVRAQDRLSAWIDHLCQCAA-GEALDTCFIGVDE 1012 Query: 1005 EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTL 1064 + + ++AE A+ L +E Y G APL LP + A L C D +DD T+ Sbjct: 1013 DVVWSAVSAESAITALVDYVEYYLAGTEAPLAFLPNTAMAGLSACIDKDG-HWSEDDVTM 1071 Query: 1065 QKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 KAR+K A+EG MV GEG++ + R+W Q ++ + E + LLP + Sbjct: 1072 DKARSKMRAAFEGGYMVSGEGENTYIARVWPQADDALLDTVFELGKAVLLPALDGEK 1128 >UniRef50_B6EGE9 Exodeoxyribonuclease V gamma chain n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EGE9_ALISL Length = 1127 Score = 707 bits (1823), Expect = 0.0, Method: Composition-based stats. Identities = 486/1141 (42%), Positives = 685/1141 (60%), Gaps = 38/1141 (3%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M VYHSN+LDVL++L+ ++ LD+PFE E ILVQS GM+QWL++ L+++ GIAAN+ Sbjct: 1 MFTVYHSNQLDVLKSLVVELIRLNPLDNPFEQEQILVQSPGMSQWLKIELAKELGIAANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FPLPA+FIWD+F +VL ++PK SAFNK++M+WK++TLLP+LL++++F L+ YL +D Sbjct: 61 TFPLPATFIWDLFTQVLDDVPKRSAFNKEAMTWKIVTLLPELLKQDEFAPLQRYLENDDK 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + K +QL++K AD+FDQYLV+RP+W+ +WE G V L WQ LW+AL + T LG Sbjct: 121 QLKCYQLAAKIADIFDQYLVFRPEWIQKWEAGEEVIELEGEHPWQPILWQALYDQTLALG 180 Query: 181 QPRWHRANLYQRFIETLE---SATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIH 237 +HRAN+++ FIETLE T P G+P R+F+ GI++LPP YL AL ALG+HI++H Sbjct: 181 HSPYHRANMFEHFIETLENYLQTGTLPKGMPKRLFVVGITSLPPRYLDALAALGQHIDVH 240 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG- 296 L+FTNPC++YWGD++D YLAKL + R R S + L N D + Sbjct: 241 LMFTNPCQHYWGDLRDNKYLAKLDRQNR---------IAKRLSSDLSTLENDDSDLFTNK 291 Query: 297 --NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 N LLASWGKLGRD LL DL E FV ++LLH+IQSDIL LE R+ V Sbjct: 292 SENSLLASWGKLGRDNFQLLLDL-EPNEYKIFVPTGREDLLHSIQSDILNLEERSRDDVL 350 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 S++K+P+ P D SI H CHSP REVEVLHD+LL M DP L PRDIIVMVAD Sbjct: 351 DN----SEHKQPISPDDRSILLHSCHSPMREVEVLHDQLLDMFANDPELKPRDIIVMVAD 406 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 I+ YS IQAVFG+A DRY+P+AISD+ A Q +PVL AF++L++LP++R ++L+LL Sbjct: 407 INVYSAAIQAVFGNAAFDRYIPFAISDQSAEQENPVLLAFMNLMALPENRCGLSELLSLL 466 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 +VP + +RF E +++W E+GIRWG+D+ +LP Q++W FG+ RMLLG Sbjct: 467 EVPAVMSRFKFNAEQFEIVKRWAEETGIRWGLDNSTSAHFDLPEHNQNSWLFGIQRMLLG 526 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 YAME G ++ + Y++ G+ AE+ G+LA + QL ++ L Q + + W + + Sbjct: 527 YAMEQDAGLFEGMASYEQVQGMNAEIAGNLAHFIDQLLTYQITLGQAQKINAWRTIINQL 586 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 ++ F L + E E + I Q Q + A + + ++ + L L + SQRF Sbjct: 587 MDDFLLVELEGELVVKSIRDQLQKLEENLEDAGFDAPISAPIINNYLKNNLSGGKASQRF 646 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 LAG VN CTLMPMRSIPF V+CLLGM DG YPR + GFDLM ++ K GDRSRRDDDRY Sbjct: 647 LAGKVNFCTLMPMRSIPFDVICLLGMTDGSYPRTMPVEGFDLMQKRMKPGDRSRRDDDRY 706 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 LFLEAL SA + Y+SYIGRSI+DN+E+ PSVLV EL++Y QS+ L GD LN +ES Sbjct: 707 LFLEALQSANKAFYLSYIGRSIRDNTEKAPSVLVSELLEYCQQSYCLDGDSELNPEESAK 766 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE--TV 832 + LT H +P+ Q++ SYA EWLP A G+A EF PE + Sbjct: 767 HLVKKLTIEHPLVPYSQQSFVGDN-TSYASEWLPTAKLEGQAAPEFQTEPLVFAPESKEL 825 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD 892 L LQRFW PV FF L+V F T +S + D EPF ++G + Y + +LL L+ D Sbjct: 826 ELTELQRFWRLPVAYFFNRGLKVFFETVESRVEDDEPFSIDGRTGYGMKSELLEELLAYD 885 Query: 893 DA-------ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI-----ACRQPGQS 940 D +++ +A G LP G+FGEI + + +++L D + Sbjct: 886 DPNQVFQLSREFYQQQKAQGKLPIGSFGEIAADKEVNTVKELVDHIQPLTTSPLEDQEVR 945 Query: 941 MEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFL 1000 + +++ GWL Q +G+LR+R + + + W++HL CA + LF Sbjct: 946 LRFTFPHGEMELQGWLKQRYKEGMLRYRGGKIRSHEVLATWIDHLCLCAMKQQQFTHLF- 1004 Query: 1001 RKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDD 1060 D + F P+ E+A +L ++ Y G APL LP++ A L+ D + DD Sbjct: 1005 GTDAIYHFEPIETEKAYQHLEVILSLYISGNCAPLPYLPKAALAGLEAHIDKKGV-WNDD 1063 Query: 1061 DSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFN 1120 D T +KA K Y G GE + + R+W + E + I + ++ L + Sbjct: 1064 DETHEKALKKMADEYSGTRYA-GENSNDYVMRMWPEWNDELGQTIFDNAKNVLHDALLHS 1122 Query: 1121 Q 1121 + Sbjct: 1123 E 1123 >UniRef50_Q2BKD9 Exodeoxyribonuclease V, 125 kDa subunit n=2 Tax=Neptuniibacter caesariensis RepID=Q2BKD9_9GAMM Length = 1092 Score = 696 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 472/1124 (41%), Positives = 662/1124 (58%), Gaps = 40/1124 (3%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +VYHSN L VL+ L+ ++ R+ + DPF E ILVQS GMAQWL++ L+ K GIAA+I Sbjct: 1 MFQVYHSNSLLVLKDLLTELIRRDPISDPFVAEQILVQSPGMAQWLKLELADKSGIAASI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DFPLPASF+W F VLP++P+ SA+NK++MSWKLM +LP +L++ F+ L+ YL DD D Sbjct: 61 DFPLPASFLWKHFSEVLPDVPERSAYNKEAMSWKLMAVLPAMLKQPVFSALQQYLADDDD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + +L+QL +K AD++DQYLVYRPDW+ WE G + WQ LW+ L YT L Sbjct: 121 RFRLYQLCNKIADIYDQYLVYRPDWIEDWEQGGDIAAARHP--WQPVLWRELKSYTEDLQ 178 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 Q WHRAN++ F++ L++ + LP R+F+ GISALP Y+ ALQALGK I++HL+ Sbjct: 179 QSHWHRANMFSAFVDGLKN-PSAAEKLPRRLFVFGISALPQNYVHALQALGKRIDVHLMV 237 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NPCRYYWGDI D + +A+L R D GNPLL Sbjct: 238 MNPCRYYWGDILDQSQIARLNRRWFSKPDLDFSD------------------YAEGNPLL 279 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 AS GKLGRDY+Y L D E+DA+ D +LL IQ DIL+LEN E+ Sbjct: 280 ASMGKLGRDYLYQLQDNA-LDEIDAYADPERGSLLSAIQQDILDLENPTR---LPEQIDN 335 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 S K LD D SI H CHS RE+EVLHD+LL M E++P L PRD+IVM+ D+ +Y+P Sbjct: 336 SHGKHRLDREDRSIELHSCHSALREIEVLHDQLLDMFEKNPLLKPRDVIVMMPDVAAYAP 395 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +I+AVF +APA+RY+PY+ISDR RQ +P+L +F +L L SRF DVL LL+VP + Sbjct: 396 YIEAVFANAPAERYIPYSISDRSNRQENPLLLSFEKILKLNSSRFTVSDVLELLEVPAVM 455 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 R + E+ + LR WV++ IRWG+D + ELP Q++WRFG+ RML+GYA+ Sbjct: 456 RRVGLDEKSFQKLRFWVDQVNIRWGMDSEQRSIWELPLFEQNSWRFGIKRMLVGYALGEG 515 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 WQ V PY E GL +EL+G LA + L+ R Q+ W+ V +L +F Sbjct: 516 SEYWQGVAPYTEIEGLESELLGKLAGFIDLLDETRLHFTQDHEFSTWIEVINQILENYFT 575 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 D + E ++ I + Q + + A Y A+ S++ L ++Q+R SQRF+ G VN Sbjct: 576 ADEQDEISLNTIRKTLQGLQEQLKDANYSQALSPSVIAHYLIDGINQQRSSQRFMVGSVN 635 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 CTLMPMRSIPF VVCLLGMNDG YPR + P+GFDLM+ P+RGDRSRRDDDRYLF+EAL Sbjct: 636 FCTLMPMRSIPFSVVCLLGMNDGTYPRSIPPVGFDLMTDYPRRGDRSRRDDDRYLFMEAL 695 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 +SAQ+KLYISYIGRSI+DN+E+ PSVLV EL+DY Q + L GDE L+C S +++AH+ Sbjct: 696 LSAQEKLYISYIGRSIRDNNEKIPSVLVSELLDYAEQGYVLEGDEELSCSNSGEKLRAHI 755 Query: 781 TCLHTRMPFDPQNYQPG-ERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET-VPLETLQ 838 H + F P+ ++ + S+A EWLPAA +A F+ + + L+ L Sbjct: 756 KTQHPLVAFSPEYFKSAGDYFSFASEWLPAAQAESRAAEVFLTEDLTSEALPELELKQLI 815 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF 898 F P R+FF RL+V F + E D EPF L+ LS Y + Q+ L + ++ D ERL Sbjct: 816 SFLRDPCRSFFNNRLKVYFGNSEIEAQDEEPFSLDNLSSYLLKQRYLQSALQDRDLERLD 875 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP-GQSMEIDLACNGVQITGWLP 957 + A G LP GE+ + +LA+++ + Q +EI+L+ V++ GWL Sbjct: 876 KAILAEGRLPLARAGELNLNKLRHDSLELAEKLKPLSEGTPQRIEINLSIGEVKLQGWLD 935 Query: 958 QVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQAL 1017 PD LLR+RP+ ++ + W+EHL CAS + ++ G+ + + AE+A Sbjct: 936 SCYPDHLLRYRPAQVNARDRLSTWVEHLALCASNQACRNTVYRGLSGKVFYKAVPAEKAT 995 Query: 1018 HYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEG 1077 L+ LI Y++G +AP S + + K + + G Sbjct: 996 ELLADLIRFYQQGQTAPQAFDAGSAHKYFEQ-----------QAKDPDKVMSALENQFYG 1044 Query: 1078 NMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 + G D+ + +R + P + + ++R PL + Sbjct: 1045 SAYSNGLQDNPYLRRAFSDFEPF-VTQFIPLAERIYEPLLSCVE 1087 >UniRef50_A1SUW0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Psychromonas RepID=A1SUW0_PSYIN Length = 1149 Score = 696 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 464/1150 (40%), Positives = 661/1150 (57%), Gaps = 41/1150 (3%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M RVYHSN+L +L+ L+ +++ +L DPF E ILVQS GMAQWLQ+ ++Q GI+ANI Sbjct: 1 MFRVYHSNQLALLKDLLVALMQGAKLTDPFASETILVQSPGMAQWLQLEIAQSTGISANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DFPLPASFIW F VL ++P +S FNK SM+W++M LLP LE DF+ L HYL DD Sbjct: 61 DFPLPASFIWQQFKHVLKDVPDKSPFNKMSMTWQIMRLLPDCLEDPDFSALLHYLEDDLY 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETG-------------HLVEGLGEAQAWQAP 167 RK FQLS K AD+FDQYLVYRP+W+A WE + E Q WQA Sbjct: 121 LRKRFQLSQKIADIFDQYLVYRPEWIAAWENASEQEISQWHAENTESIPAWLEDQRWQAK 180 Query: 168 LWKAL---VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYL 224 LWK L + + + +HRA LY+ F++TL + T LP R+F+ GISALP YL Sbjct: 181 LWKKLTLTIAESFKAQGKAYHRAGLYKDFLDTLATKKT-LEHLPKRIFVFGISALPESYL 239 Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL-------F 277 QAL L +H ++H L TNPCRYYW DI DP LAK + R+ Sbjct: 240 QALLGLAEHCDVHFLLTNPCRYYWADIVDPKLLAKRFAQSRQKLTVSGGEIKNLPDSSWQ 299 Query: 278 RDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHN 337 +D+ + ++D + +VGNPLLAS GK+GRD+++ L LE QE+DAFVD+T D+LLH+ Sbjct: 300 KDASHLQWSQSNDPDNEVGNPLLASMGKMGRDFLFQLYSLEQ-QEVDAFVDITRDSLLHH 358 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 IQ+D+L+L++ + A S L P +S+T H+CHS REVE+LHD LLAM Sbjct: 359 IQADVLDLQDSSQALSKDPSARIS-----LAPEGNSLTLHLCHSVMREVEILHDNLLAMF 413 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 D LTP+DIIVMV DID Y+P++QAVF S +RY+P++ISD A+Q +P+L +F+ L Sbjct: 414 AADNNLTPKDIIVMVPDIDQYAPYVQAVFASVEQNRYIPFSISDVSAQQENPILISFLQL 473 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L+L +R+ ED+LALL+VP + RF++ ++ L++W+NESGIRWG+D+ + + +LP Sbjct: 474 LNLNQTRYTREDILALLEVPAILQRFNLNQDEFVLLQKWINESGIRWGLDEKSAAQWDLP 533 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 Q++W FG+ RMLLGYA+ ++ + YDE GL +L+G + L + G Sbjct: 534 RLSQNSWLFGIRRMLLGYAISD--TLFEGISAYDEIQGLQGDLLGRFIDFIDALIKLQEG 591 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 L Q +W +L F+ D + ++LI + ++ A + + L +L Sbjct: 592 LKQSYNANQWQAFVYQLLEDFYQEDDDNTMVLSLIRNEMDNLLDHTGQADFTQPISLFVL 651 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 + L Q L + SQRFLAG VN CTLMPMRSIPFKVVCLLGMNDG YPR + P+GFDLM Sbjct: 652 IEHLEQHLSDQGNSQRFLAGQVNFCTLMPMRSIPFKVVCLLGMNDGQYPRNIVPMGFDLM 711 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 + KRGDRSRR++DRYLFLEAL+SAQ+K YISYIGR I DNSE+ PSVLV EL++Y Q Sbjct: 712 AGHRKRGDRSRREEDRYLFLEALLSAQEKFYISYIGRDINDNSEKMPSVLVSELLNYCQQ 771 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH 817 S L ++ +E +KA ++ + F + YQ + +Y W A A A Sbjct: 772 SFVLKDNQQDQNRVAEKALKAFISFHYPMQSFSERYYQGDVK-TYNPNWWAALKDAKNAG 830 Query: 818 SEFVQPLPFTLPE--TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 + + L VPLE L++F HP + FF RL V F +D + + EPF L Sbjct: 831 EKSHKRLLTLDQSLTEVPLEQLKQFLKHPCKVFFNQRLDVYFELDDDQQENDEPFSFNHL 890 Query: 876 SRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR 935 +Y + + +E + LF RAAG LP+G F + + + M+ LAD + Sbjct: 891 QQYVLKHEQFEYALEGKSLDNLFIEKRAAGKLPFGEFAALIFTKDLEPMENLADLTTSYF 950 Query: 936 -QPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNG 994 +++ ID+ ++ G L GL+R + + + LWLEHL YC + G Sbjct: 951 IGEIETINIDIQFAEKRLFGELNDHCEKGLVRVKTGNIKGKDILTLWLEHLCYCIASGQN 1010 Query: 995 ESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQN 1054 + L + + F L A+ A + +S+L+ Y G+ PL +S AW + + + Sbjct: 1011 LNSTLLGQKEGFYFKELPADYAYNRISELLALYEAGLQQPLPFFIQSAFAWCEQVHKLEP 1070 Query: 1055 DAMLDDD---STLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQR 1111 + + DD +T+ +A+ + N EG D + R + L +A + + Sbjct: 1071 NCFVFDDLEFATIAEAQQVASLCF-SNDRGFSEGQDPYINRCYENLED-HWDAFQPLALK 1128 Query: 1112 FLLPLFRFNQ 1121 +P+ + Sbjct: 1129 IFMPILSNIK 1138 >UniRef50_C9PLM5 Exodeoxyribonuclease V gamma chain n=5 Tax=Gammaproteobacteria RepID=C9PLM5_VIBFU Length = 1173 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 516/1168 (44%), Positives = 711/1168 (60%), Gaps = 61/1168 (5%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M VYH+N++D L+ L+ +++ + L +PFE E ILVQS GM+QWL+M L+Q+ G+AAN+ Sbjct: 1 MFTVYHANKVDTLKILLVHLIKNDPLANPFEKEQILVQSPGMSQWLKMALAQELGVAANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DFPLPA+FIW+MF +VLP +PK SAFNK++M+WKLM LLP L+++ F LR YL DD+D Sbjct: 61 DFPLPATFIWEMFTQVLPNVPKRSAFNKEAMTWKLMELLPSQLDQDVFAPLRRYLQDDTD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + KL+QL+ K AD+FD YLVYRPDW+A WE G V + WQ LWKAL +YT G Sbjct: 121 QSKLYQLAEKIADIFDGYLVYRPDWIAHWEAGESVAEIDGEHPWQPVLWKALYDYTLAQG 180 Query: 181 QPRWHRANLYQRFIETLESATT-----CPPGLPSRVFICGISALPPVYLQALQALGKHIE 235 Q +HRANLYQ FI+ L LP R+FI GIS+LPP Y+ AL+ALG+HI+ Sbjct: 181 QSHYHRANLYQSFIDALAHIDLTHDEALRAALPKRLFIFGISSLPPRYMDALKALGEHID 240 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFE-----------DRELPLFRDSENAG 284 +HL+FTNPC++YWGDI+D YLA++ +++R+ + E+ + + Sbjct: 241 VHLMFTNPCQHYWGDIRDRKYLARVESQRRKQLVLHPNAETHTFTVEGEVSPLKGELDDY 300 Query: 285 QLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE 344 Q VGN LLAS GKLGRD +YLL+ ++ + + F+DV D+LLH +Q+DIL Sbjct: 301 AGDELHTAQAVGNSLLASMGKLGRDNLYLLAQSDNEEH-ELFIDVPRDSLLHQLQADILH 359 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 LE + S +K L D S+T H CHSP REVEVLHD LLAM + DP L Sbjct: 360 LEE----HQDDTLLDSSAHKPALPHGDRSLTLHACHSPMREVEVLHDELLAMFDRDPELK 415 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 PRDIIVMVADI++YSP+IQAVFG+AP +R++PY+ISDR A Q P+L AF+ L++LP SR Sbjct: 416 PRDIIVMVADINAYSPYIQAVFGNAPGERFIPYSISDRTADQESPILNAFMQLVALPQSR 475 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 ++ ++L LL+ P + ARF + ++WV ESGIRWG++D +E ELP T Q+TW Sbjct: 476 CLASELLELLETPAMMARFALDASEFDTAKRWVEESGIRWGLNDATAQEFELPQTHQNTW 535 Query: 525 RFGLTRMLLGYAMESAQGEWQ----SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 +FG+ RMLLGYAM S+ G ++ ++ PY+E G+ AEL G LA + ++ +R+ LAQ Sbjct: 536 QFGIARMLLGYAMPSSVGLFEAGGHAMAPYNEVQGMSAELAGKLAHFIDTISDYRQRLAQ 595 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 +P+E W + +L+ F D + E A+ I A+ + A Y DA+ +++ Sbjct: 596 TQPIEAWRELLSSLLDDCFSVDLDGEMALKSIRDTLAALKEQLADAGYADAISPAIMGQY 655 Query: 641 LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 L +L R+SQRFLAG VN CTLMPMRSIPF VVCLLGMNDGVYPR + P GFDLM+ + Sbjct: 656 LHDKLSGTRVSQRFLAGQVNFCTLMPMRSIPFNVVCLLGMNDGVYPRSMPPEGFDLMNGR 715 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 + GDRSRRDDDRYLFLEA++SAQ LYISY+GRSIQDN+ER PSVLV EL++Y Q++ Sbjct: 716 TRPGDRSRRDDDRYLFLEAMLSAQHTLYISYVGRSIQDNTERVPSVLVTELLEYCQQNYC 775 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA---- 816 L GDEAL DES AR+ L H +PF PQ + SYA+EWLPAA + G A Sbjct: 776 LAGDEALPSDESGARLIEQLQFTHAMVPFSPQAFLTDV-GSYAKEWLPAALRQGTASGTF 834 Query: 817 -HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 + L P + L LQRFW PV+ FF RL+V F + D EPF L GL Sbjct: 835 HRALDDYLLDAIYPLELDLVELQRFWRLPVQYFFNRRLKVVFEPPLPVMEDDEPFALGGL 894 Query: 876 SRYQINQQLLNALVEQDDAERLFRRF-------RAAGDLPYGAFGEIFWETQCQEMQQLA 928 + YQ+ LL+ L+ A+ RA G LP GAFGE+ +ET + ++L Sbjct: 895 ASYQLRDALLDGLLNAPSAQARDEVLAQFNKQQRAQGKLPVGAFGELEFETNRVQAEELV 954 Query: 929 DRVIAC-RQPGQSMEIDLAC------NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW 981 ++V + P ++++L V ++GWL + GL+R+R + + W Sbjct: 955 EKVQFLCQAPLDDLDVNLTLTALGQSRPVHLSGWLTRRYQSGLVRYRSGAIRSEDMLAAW 1014 Query: 982 LEHLVYCASGGNGESRL--FLRKDGEWR--FPPLAA------EQALHYLSQLIEGYREGM 1031 ++HL ASG N + + + RKDG PPL A AL L++L Y +GM Sbjct: 1015 IDHLAAAASGANLITHVIGYDRKDGVVHQVLPPLNANASESAALALAQLNELARLYYQGM 1074 Query: 1032 SAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQ 1091 +APL P++ A ++ + +K+ K + + M GEG++ + Sbjct: 1075 TAPLAYFPKTALASVEA-----GFSRGQWVDDEEKSLKKMAETFNDGFMTSGEGNNHYIA 1129 Query: 1092 RLWRQLTPETMEAIVEQSQRFL-LPLFR 1118 RLW Q T E + + L P + Sbjct: 1130 RLWPQWTDELAHQVRVLASLVLQAPRLQ 1157 >UniRef50_A5GC93 DNA helicase/exodeoxyribonuclease V, gamma subunit n=7 Tax=Geobacter RepID=A5GC93_GEOUR Length = 1091 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 387/1134 (34%), Positives = 585/1134 (51%), Gaps = 75/1134 (6%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L++Y SNR++ L + +V + L PF PE I+VQS GM +WL M L+++FG+ AN + Sbjct: 3 LKIYTSNRMETLVDQLAGVV-EKPLPSPFTPETIVVQSKGMQRWLAMELARRFGVWANGE 61 Query: 62 FPLPASFIWDMFVRVLPE---IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 FP P + + +F V+P+ P+ S+F+ ++W+LM LLP L F L YL DD Sbjct: 62 FPFPNAVVETLFRAVIPDLAETPQVSSFHPDVLTWRLMELLPSCLGGPGFEPLAGYLADD 121 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQ 178 D K QL+ K AD FDQY +YRP+ L WE G WQ LW+ LV Sbjct: 122 GDGLKRLQLAEKIADTFDQYTIYRPELLLSWEEGAEGG-------WQGLLWRELVRNATD 174 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 HRA L F + T LP R+ + GI LPP +++ L + + EI+L Sbjct: 175 -----RHRAALLAEFRRRINRPDTAAAELPRRISLIGIPTLPPFHMEVLSGIARQTEINL 229 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 NPCR YWG I LA+L R G + GNP Sbjct: 230 FLLNPCREYWGKIVSERELARLERRGLDE-------------------DPLHGYFETGNP 270 Query: 299 LLASWGKLGRDYIY-LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 LLAS G++GRD+ L+ D ++ D F ++ LLH IQ++IL+L +R AG Sbjct: 271 LLASMGRIGRDFFDSLIGDCGDAEFSDTFTEIRGSGLLHAIQANILDLRDRGAAGD---- 326 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + ++ D ++ H CHS RE+EVL+D++L++ + DPTL+PRDI+VM DI++ Sbjct: 327 ------REVIEATDDTLRIHSCHSAMREIEVLYDQILSLFDNDPTLSPRDILVMTPDIEA 380 Query: 418 YSPFIQAVFGS-APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y+P+I AVFG+ ++ +PY+I+DR R+ E +++L L SRF +VL +L+ Sbjct: 381 YAPYISAVFGTPEQPEQRIPYSIADRSLRREGETAEVLLAILQLCGSRFAITEVLDILEA 440 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 + RF +T++ L + QW+ + IRWGID +PA +++W+ GL R++LGYA Sbjct: 441 APVCRRFGLTDKDLETVHQWLTATNIRWGIDAMERTGHGVPAFSENSWQAGLDRLILGYA 500 Query: 537 MESAQG-EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 M + +LPYD G A L+G L + LA+ R +EEW V R +L Sbjct: 501 MAGEDRHFFGEILPYDHLEGSDALLLGRFLEFCETLFSRVQALARPRQIEEWTAVLRSLL 560 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 F D + E + + + + + A +G V + ++R L ++L E+ FL Sbjct: 561 GTFIKADGDDERDVATLLKVIERLDECRAHANFGGDVGIEIVRAWLGEKLGSEQRGFGFL 620 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 G V C ++PMRSIPF+V+ LLGMNDGV+PR+ P GFDL++ P+RGDRS+RD+DRYL Sbjct: 621 TGGVTFCAMLPMRSIPFRVIALLGMNDGVFPRRNRPHGFDLIAASPRRGDRSQRDEDRYL 680 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 FLEAL+SA+++ ISY+G+SI+DNSE PSVLV EL+DYI + G+EA Sbjct: 681 FLEALLSARERFSISYVGQSIKDNSELPPSVLVSELLDYIAKGFTRAGEEADE-----TA 735 Query: 776 VKAHLTCLHTRMPFDPQNYQP--GERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET-- 831 ++ H PF ++P G SY+RE L A + L LP Sbjct: 736 AVRGISVRHPLQPFSRDYFRPNDGRLFSYSRENLHGVLAAIAPPAVPATFLSRPLPPAEE 795 Query: 832 --VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV 889 V L L F+A+P + F + RL + D ++EPF L+ L +Y + Q+++ AL+ Sbjct: 796 TLVTLYDLAEFFANPCKHFLRRRLGIYLEQRDESFAESEPFSLDHLGKYMLGQEIVAALL 855 Query: 890 EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR--QPGQSMEIDLAC 947 + + R+ G+LP G G I ++T A++V A P +EIDL Sbjct: 856 AGESLDNHRAVARSRGELPPGECGTITYDTLASAASDFAEQVAAATVGAPLPPLEIDLEF 915 Query: 948 NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVY--CASGGNGESRLFLRKDGE 1005 ++ G + ++ P+GL+ +R + L +++W+EH+ A G + L D Sbjct: 916 KESRLVGRIERIWPEGLVHYRYAKLKAKDRLRIWIEHICLTSAAPTGYPRTASLLASDVT 975 Query: 1006 WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQ 1065 P++ +L L QL+ YR GMSAPL P+S + + D + Sbjct: 976 VAIAPVS--DSLALLEQLLTIYRRGMSAPLPFFPKSALEYARKANDPKK---------AA 1024 Query: 1066 KARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRF 1119 KA + + G+ GE +D +YQR + P + S+ PL Sbjct: 1025 KALGDARKKWHGSEDYPGEKEDPYYQRCFGNEEPL-DGEFMALSRMVYDPLLAH 1077 >UniRef50_A4SSU8 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Aeromonas RepID=A4SSU8_AERS4 Length = 1134 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 486/1167 (41%), Positives = 665/1167 (56%), Gaps = 82/1167 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +YHSN+LD+L+ L+ + + L PFE E +LVQS GMAQWL++ L++ FGIAANI Sbjct: 1 MFTLYHSNQLDLLKELLVNHIRQAPLAHPFEQEQVLVQSPGMAQWLKLELAKAFGIAANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD--- 117 +FPLPASFIW+MF RVL ++P++S +NK +MSW+LMT+LP LL+R F L YL Sbjct: 61 EFPLPASFIWEMFTRVLADVPRQSPYNKGAMSWQLMTILPALLDRPAFAPLAAYLGGGDE 120 Query: 118 -----DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEA-------QAWQ 165 D ++ +L+QL K ADLFDQYLVYRPDW+A+WE G + G Q WQ Sbjct: 121 QDPAGDPEQVRLWQLCQKVADLFDQYLVYRPDWIARWEEGEGLVGTESQDLAGVSGQDWQ 180 Query: 166 APLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQ 225 LW+ LV T L +HRANLY+ FI L+ P LP RVF+ GISALPP Y++ Sbjct: 181 PELWRELVARTLALSPSGYHRANLYEEFIHELQRTRDLPGKLPQRVFVFGISALPPRYVE 240 Query: 226 ALQALGKHIEI--HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 AL ALG E+ HL TNPCRYYWGD+ D LA+L + + Sbjct: 241 ALLALGSRPEVEVHLFVTNPCRYYWGDLLDRKTLARLENKLK------------------ 282 Query: 284 GQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPD------NLLHN 337 + D Q NPLLAS GKLGRDY++ L +LE SQ ++AFVD+ LL Sbjct: 283 -PGTDLDTLQGPANPLLASMGKLGRDYLHQLMELEVSQ-IEAFVDIDEVDASGNVRLLRA 340 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 IQ D+LEL +R + S +K P+DP D S+ H CH P RE+EVLHDRLLA+ Sbjct: 341 IQKDVLELGSRGEGQ---FDLDSSYHKSPIDPADGSLQIHACHGPMRELEVLHDRLLALF 397 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 E DP+LTP+D++VM+ D++SY P+IQAVFG A +P+A+SDR A Q P+L++F++L Sbjct: 398 ERDPSLTPKDVVVMMPDVNSYGPYIQAVFG---ARGQIPFAVSDRAASQESPLLQSFLAL 454 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L LP +R + ++LA+L+VP + RF++ ++ LR WV E+GIRWG+DD ELP Sbjct: 455 LHLPSARLGAGELLAILEVPAVLRRFELDDDEFNQLRVWVQETGIRWGLDDAYPERFELP 514 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGE----------------WQSVLPYDESSGLIAELV 561 ++W FGL RMLLG+AM + S+LPY E G + Sbjct: 515 RMSGNSWLFGLRRMLLGFAMGDGEPVAGMSFCADHGAGQQGAVASILPYAEIEGQQGLAL 574 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 G LA + L + L +E+ L EW D+L+ F+L D E E + LI Q Sbjct: 575 GKLAWFVDSLAEFLPRLQREQSLPEWSACLLDLLDRFYLADEEEERLLQLIRSQLADWQT 634 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 + A++ + LL+D L + L + R SQRFLAG VN CTLMPMRSIPFK VCLLGMN Sbjct: 635 QLGEARFDQPITADLLQDYLGKVLGESRSSQRFLAGQVNFCTLMPMRSIPFKQVCLLGMN 694 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 DGVYPR LAP+GFDLM+ +RGDRSRRDDDRYLFLEAL+SAQQ LYISY G S QDNS+ Sbjct: 695 DGVYPRTLAPMGFDLMAVASRRGDRSRRDDDRYLFLEALLSAQQGLYISYQGFSAQDNSD 754 Query: 742 RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER-- 799 + PSVL+ ELIDY+ Q L GDE L+ + S R+ HL H P+ + P Sbjct: 755 KVPSVLLAELIDYVRQGFVLAGDERLDDEASGERLLKHLVVEHPLTPYSRSYFYPEAESR 814 Query: 800 -QSYAREWLPAASQAGKAHSEF----VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQ 854 +YA +WLPA + A + P + + + L L RF+ P + F RL+ Sbjct: 815 LFTYAADWLPALNPVRGAANFQSGELPLPPEWGREQGLELAELLRFYRQPAKYFLNRRLK 874 Query: 855 VNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE 914 V F ++ I D+EPF L+GL YQ+ LL++ + + D+ R + G LP G FG Sbjct: 875 VWFELNEANIEDSEPFELDGLQHYQLKALLLDSHLAEGDSAVRRERLQLTGLLPQGWFGS 934 Query: 915 IFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSV 974 + + EM +LA+R+ Q++EID++ Q+ GW+ Q LL +P + Sbjct: 935 LLLDDLDAEMGKLAERLRPWVSEKQAVEIDISLAQGQLQGWIDT-QKGRLLVVKPGSFNG 993 Query: 975 AQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAP 1034 + W++HL S G++ LF K R P L+A++A L+ L+ + +GM P Sbjct: 994 KDLLLGWIQHLCLSLSCAPGDTLLFDAK-QSLRLPKLSADEARPKLAALVALWAQGMKRP 1052 Query: 1035 LLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLW 1094 L P + WLK + A L + G MV GEG D++ R + Sbjct: 1053 LPFFPNTAWDWLKAMEKEPDKP--------DAADKAALTRFNGGWMVTGEGQDVYVARCF 1104 Query: 1095 RQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 +L + + ++ L PL + + Sbjct: 1105 PELDEAVLSQLQALAREHLPPLLKTLE 1131 >UniRef50_Q3IJ13 Exonuclease V, gamma chain with recB and recD: 5' and 3' nuclease, ATPase, recombinase, helicase n=3 Tax=Alteromonadales RepID=Q3IJ13_PSEHT Length = 1099 Score = 649 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 384/1130 (33%), Positives = 600/1130 (53%), Gaps = 47/1130 (4%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML + SNR++ L+A +++ L PF+ E++LVQS GM+QWL++ LS+ G+AA + Sbjct: 1 MLNIIQSNRMEALQAQFHQLLKTNPLASPFDKEVVLVQSPGMSQWLKIGLSENLGVAAQV 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DFPLP+SFIW ++ ++LP +PKESAFNK +++WKL +LP ++ + L+ YL D D Sbjct: 61 DFPLPSSFIWQLYQQLLPNVPKESAFNKPNLAWKLFAILPSCIDEPLYLPLKTYLEGDID 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETG-HLVEGLGEAQA-WQAPLWKALVEYTHQ 178 +K F L K AD++DQYL+YRP W+A W++G ++ + A WQ LW+ +V+ + + Sbjct: 121 GQKTFALCEKIADVYDQYLMYRPHWIATWDSGIDELDDVDVTIAPWQPDLWRRIVQLSLE 180 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 LGQ ++HRAN+ + + LE+ LP R+ + GISA+ L+ AL + E+ L Sbjct: 181 LGQSQFHRANMQGQLLAALETMDN--SLLPQRISLFGISAIASSQLEVFTALSEKTEVFL 238 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 F NP +YWGDI D AK+ + + + + Q + +GNP Sbjct: 239 FFFNPSEHYWGDIIDEKTAAKISAKYAKMPLVEAQQ--------KKQTNPDEEYYFIGNP 290 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAG-VNIEE 357 LL+SWGKLGRDY L L+ ++ +D F+DV D LL IQS+I +L + + N E Sbjct: 291 LLSSWGKLGRDYFEQLVQLD-ARWIDGFIDVFDDTLLGQIQSEIYQLAFKGESLTDNKEW 349 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 F + K P+ D+SIT CH+P REVE LHD LL + ++P LTP+DIIVM+ D+ + Sbjct: 350 FINDEGKLPISATDTSITLSDCHTPLREVERLHDYLLNLFNQNPALTPKDIIVMMPDVGT 409 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 YSP+I+AVFG A R++PYA++D Q +PVL +F SL +LP SRF D+L LL V Sbjct: 410 YSPYIEAVFGGAQGSRFIPYALADLAIEQENPVLSSFASLANLPFSRFGVSDILDLLQVT 469 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 +A +F + ++ W+ G++WGI+ D+ +LPA +TW+ GL R+LLG AM Sbjct: 470 QIAEKFGLEAHEYEQIQYWLERVGVKWGINADHKSSFDLPAIDLNTWQHGLNRLLLGIAM 529 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 Q + + DE G+ + + L + L ++ L + L V ++L+A Sbjct: 530 RDEQCPFNGIYSADEVEGMALDTLNKLVHFIDVLQSFKEQLTPDDTLTNKAHVLSELLSA 589 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 + +++ + +++ + + Y AV ++ + Q + ++ + QRFL G Sbjct: 590 IYESESDDSWDLLVLQNVLEELQKHHNNGDYSKAVSQRIVSYLIKQGIQEKGVGQRFLVG 649 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS-QKPKRGDRSRRDDDRYLF 716 VN CTLMPMR++PFKVVC+LG+ND YPR + P+GFDL+ K ++GDRSR+ DDRYLF Sbjct: 650 QVNFCTLMPMRAVPFKVVCMLGLNDADYPRNVQPIGFDLVPYSKKQKGDRSRKLDDRYLF 709 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 LEAL+SA+ LY+SYIGRS DN R PS LV EL++YIG+S L D+SE + Sbjct: 710 LEALLSARDNLYMSYIGRSCFDNQPRMPSTLVSELLEYIGRSFAL-------SDDSEKTL 762 Query: 777 KAHLTCLHTRMPFDPQNY---QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP 833 L PF+ Y + + P + + V L T PE + Sbjct: 763 PECLISQQHLQPFNSHYYLANEQANTVLSNHSYNPIWLPSESITPQVVSALNATPPEQLE 822 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD 893 L+ R + +F+Q L + + + D EPF L+ L RY ++L A + + Sbjct: 823 LDVFIRSVCNAQESFYQQSLGLRLPQFNEVVKDEEPFSLDALRRYFYLDEILEANINELP 882 Query: 894 AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC--RQPGQSMEIDLACNGVQ 951 + G+LP G + +E+ + LA +V +E+ L + Sbjct: 883 LST--EQILQRGELPQANVGSLIFESMQHRVDALAGQVKEQIKGGKSDPIEVALELENTK 940 Query: 952 ITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPL 1011 I GWL + + +R + + ++ ++ HLV + L L D + F P+ Sbjct: 941 IEGWLNHIYLQKQVFYRSASIKAKDLIKGFIYHLVAQSMEQQ-VETLILGLDKQVTFAPI 999 Query: 1012 AAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKF 1071 + A L E Y+ + P+ P SG ++K+ + KA +KF Sbjct: 1000 SKTDADALLVDWFELYKALRNEPVAFFPVSGYEYVKS------------GGDIAKAMSKF 1047 Query: 1072 LQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 Y G RGEG++ + + + L + ++ S + L PLF + Sbjct: 1048 SPQYIG----RGEGENPYIRLTVQSLND-CQDEFIQWSDKLLAPLFAHAK 1092 >UniRef50_C4L7B2 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L7B2_TOLAT Length = 1130 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 472/1145 (41%), Positives = 658/1145 (57%), Gaps = 43/1145 (3%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M RVYHSN+LDVL++L+ +++ L E ILVQS GMAQWL+ L+Q G+AANI Sbjct: 1 MFRVYHSNQLDVLKSLLAHLIQLSPLQPALAAETILVQSPGMAQWLKQALAQDLGVAANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FPLP+SFIW MF +VLPE+P+E+ + K +M W+LM LLPQ ++ F L YL +D D Sbjct: 61 TFPLPSSFIWQMFHQVLPEVPQENPYTKPAMLWRLMQLLPQCMDDVLFAPLAGYLAEDHD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 R+ +QL + ADLFDQYLVYRPDW+ WE+G E Q WQ LW+ LV + Sbjct: 121 GRRCYQLCQRIADLFDQYLVYRPDWIVDWESGGAQG--AETQLWQPVLWRKLVA-LTEQQ 177 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 HR NL+ FI TL++ LP R+F+ GIS+LPP YL+AL ALG+H E+HLL Sbjct: 178 ASHLHRVNLFSSFINTLKAGKPK-AVLPQRLFVFGISSLPPHYLEALMALGEHCEVHLLL 236 Query: 241 TNPCRYYWGDI-----KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 TNPCRYYWGD+ + L KLL ++R + + + QLF+ +GEQ Sbjct: 237 TNPCRYYWGDLQEENQINQRVLNKLLAQRREQWQQAEQHKPLLPETDWQQLFSDEGEQQ- 295 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 GNPLL S GK GRDY+ LL+++ S+ E+DAF ++ D+L L + + Sbjct: 296 GNPLLVSLGKQGRDYLSLLAEI-SAAEIDAFAEINGDSL----------LHLLQQDLLEL 344 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 ++ +R KRP+ D S+ H CHSP REVEVLHD+LL DPTLTP++++VMVADI Sbjct: 345 QDGTRLRPKRPISASDRSLVLHGCHSPLREVEVLHDQLLQRFAADPTLTPKEVVVMVADI 404 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 + Y P++QAVFG+A +RY+P++ISDR A Q +P+L++F++LLSLPD R + ++L LL Sbjct: 405 NRYGPYVQAVFGNATGERYIPFSISDRSATQENPLLQSFLTLLSLPDQRCTATELLELLA 464 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 VP L RF + E L LR+W ESG+RWG++ + ELP +HTW FGL RMLLG+ Sbjct: 465 VPALLKRFGLAEADLTTLRRWAMESGVRWGLESGDGERFELPPRERHTWSFGLERMLLGF 524 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 A + + V PY G A +G LA + Q+ R L RP+ EW + +L Sbjct: 525 A-SGNETLFADVAPYTAIEGQNAVKLGQLARFIAQVMALRDELETARPITEWQNLVDRLL 583 Query: 596 NAFFLP----DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 F+LP + + AA+ LI Q+ QY + +PL++ D L L+ R Sbjct: 584 LDFYLPQEQLEEDDAAALNLIRSTLQSWQQRLSQMQYQEPLPLTVFHDHLQSELNAVRGG 643 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 Q+FLAG VN CTLMPMR+IPF++VCLLGMNDG+YPR + PLGFDLM+ +P++GDRSRR+D Sbjct: 644 QQFLAGRVNFCTLMPMRAIPFRLVCLLGMNDGLYPRSMPPLGFDLMADQPRKGDRSRRED 703 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 DRYLFLEAL++AQQ+LYISY+ S DN + PSVLV EL++Y ++ LP DE E Sbjct: 704 DRYLFLEALLAAQQQLYISYVAHSAIDNRDLMPSVLVTELVEYCQRAFLLPEDEEKAETE 763 Query: 772 SEARVKAHLTCLHTRMPFDPQNY------QPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 E + HL H +P+D + + + SYA EWLPA + G+A + Sbjct: 764 QETALHQHLLTGHPLVPYDRRYFSPTVPPATADLFSYAAEWLPALTPTGQAGFFDARLSL 823 Query: 826 FTLPE---TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 + + L RF+ +PV FF+ RL+V F ++ + +TEPF L+ L +YQ+ + Sbjct: 824 PEELQGKPEIELADWLRFFRNPVAGFFRRRLRVQFVEREAALEETEPFWLDKLQQYQLRE 883 Query: 883 QLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC-RQPGQSM 941 +LL D R A G LP G FG + + + + LA + Q Sbjct: 884 RLLRYQRLDVDQAVWQARLLAEGMLPDGEFGRLALQADAKNLAPLAAALQTWPLATAQRE 943 Query: 942 EIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLR 1001 L G Q+ G + +V L+R R S L + + +WLEHL A+G + L Sbjct: 944 TFHLDFAGWQLLGSVGEVYAGQLVRHRVSKLKASWLVAIWLEHLALSAAGKLTQPTRLLA 1003 Query: 1002 KD----GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAM 1057 D GEW L+A+ A L + + EGM PL + + WL+ Sbjct: 1004 LDNGKLGEWLLAVLSADAAREQLLLWWQAFTEGMQRPLCLPVNTAWQWLEKATT--ESGC 1061 Query: 1058 LDDDSTLQKARTKFLQAYEGNM-MVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPL 1116 L DD+ +AR + Y G+ V GEG D + R + +L+ E E I E + + LLPL Sbjct: 1062 LGDDAQQLQAREAAQKTYTGDGTFVSGEGQDTYLARCFPELSSEYWEEIEEWAVQLLLPL 1121 Query: 1117 FRFNQ 1121 + Q Sbjct: 1122 RQHLQ 1126 >UniRef50_B8CMV5 Exodeoxyribonuclease V, RecC subunit n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CMV5_SHEPW Length = 1224 Score = 646 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 388/1222 (31%), Positives = 614/1222 (50%), Gaps = 131/1222 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEP-EMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML + SN+++ L ++ + P E ILVQS GM+ WL++ ++++ IAA Sbjct: 1 MLYLVQSNQMEALSQILATELTTPLPGAPLLLPEHILVQSPGMSTWLRLEIARQNNIAAA 60 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD-- 117 ++FPLP+SFIW + +L ++PKE+AF K +++WKLM LLP L++++DF L +YL + Sbjct: 61 LEFPLPSSFIWQLCHTLLEDVPKENAFTKAAITWKLMELLPSLIDQDDFAPLANYLNNGN 120 Query: 118 -------------------------DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETG 152 KL+QL + AD+FDQYLVYRPDW+A WE Sbjct: 121 QGHGENDLQSQYLEIDTSETISASHPQSPLKLYQLCGQIADIFDQYLVYRPDWIAAWEAN 180 Query: 153 HLV-----EGLGEAQAWQAPLWKALVEYT-HQLGQPRWHRANLYQRFIETLESATTCPPG 206 + L AQAWQ LW+AL+++ + L + ++HRANL+Q + L+ T Sbjct: 181 EPTLPPKGDKLAPAQAWQPILWRALIQFNANTLHKSQYHRANLHQALFDKLDDPNTSMTS 240 Query: 207 LPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRR 266 LP R+F+ GIS++ P L L L K I++ +L +PC++YWGDI DP A++ + Sbjct: 241 LPRRLFVFGISSMAPQTLDVLHHLAKRIDVIMLSLSPCQHYWGDIVDPRLRARMALQYAN 300 Query: 267 HSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLES---SQEL 323 + + + +VGNPLLA+ GK+GR+ + L+ +L + L Sbjct: 301 KQKLE---------------VEWEDKLEVGNPLLANNGKMGRELLDLMLELPEEHTAFNL 345 Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN-KRPLDPLDSSITFHVCHSP 382 D + D D +LH +Q DIL+L R + + +R L D SIT CHSP Sbjct: 346 DCYQDPGIDCMLHGVQHDILQLSTRGQCLGPDASLYLTVDGRRMLQQDDHSITIRSCHSP 405 Query: 383 QREVEVLHDRLLAMLEE-----DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 REVE LHD LL ML + L P+DI++M+ D+ +Y+P+I AVF + Y+PY Sbjct: 406 LREVETLHDHLLEMLSKQTDSKGQPLAPKDIVIMMPDVAAYAPYIDAVFSAKQGSHYIPY 465 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 AI+DR A Q P++ +F+ LL++ SRF D++ +L+VP + RF++ ++ L L++W+ Sbjct: 466 AIADRGAVQESPLIASFLHLLNINQSRFGLTDIIGILEVPSVLRRFELDDDSLTILKRWL 525 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 ++G+RWG D + E +LPA Q+ W G+ R++LGY+ +Q L + G Sbjct: 526 EQAGVRWGRDGASRAEHQLPAFEQNAWALGIKRLILGYSFADNSPLYQQTLAVNGIEGQT 585 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 A+ +G L + L+ LAQ L E + +L AF+ D + + + I Sbjct: 586 AQALGKLLDFIEALDDVHAALAQNCSLTERIEQLEQLLAAFYSVDDDEQVQLQEIRDAIV 645 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 + E + + +P+ +L++ RL + R+ QR+LAG +N CTLMPMRSIPFK+VCL Sbjct: 646 TLAEELTESGHTTPLPIEVLQNWFNSRLSESRVGQRYLAGSINFCTLMPMRSIPFKIVCL 705 Query: 678 LGMNDGVYPRQLAPLGFDLMS-QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 LGMNDGVYPR P+GFDL++ P++GDRSRR DDRYLFLEA++SA+Q+LYISYIG S Sbjct: 706 LGMNDGVYPRVQHPVGFDLVAQMDPRKGDRSRRLDDRYLFLEAILSARQQLYISYIGNSE 765 Query: 737 QDNSERFPSVLVQELIDYIG---------------QSHYLPGDEALNCDESEARVKAHLT 781 +D+SER PS+LV EL++Y +Y + A+ D+ E + L Sbjct: 766 RDDSERIPSMLVSELVEYCQLAYLPAKLALESKASADNYSKQEAAVFVDKIEQAISTQLI 825 Query: 782 CLHTRMPFDPQNYQPGE-------RQSYAREWLPAASQAGKAHSEFV------------- 821 C PFD + Y +QSY+ +W P A Sbjct: 826 CKQPLQPFDERLYHSAHISDSFPLQQSYSAQWCPVAVSQTTTDIADKSSNRFINLDTCLL 885 Query: 822 --QPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 E + L L RF+ +P + +F L+V+ + EPF L L RYQ Sbjct: 886 NTAQSDSEEVEEIELSALIRFFRNPAQYYFNRTLKVDLSINVRADDNDEPFSLNALERYQ 945 Query: 880 INQQLLNALVE---QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR---VIA 933 + L+ +E + L R +A G++P F ++ ++ L R + Sbjct: 946 LQSILIEHAIENQTESPDGELLERLKAQGNIPLKPFDDLLLSQYLHDITPLIGRSLYLKG 1005 Query: 934 CRQPGQSMEIDLAC---------NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 + ID+A +++ G + + GL+ +RP + ++++L H Sbjct: 1006 ESSQSIEIAIDIALVDGSKPVTDQSIKLVGRIDDLSAKGLVNYRPGTANGRDLIRVYLRH 1065 Query: 985 LVYCASGGNGESRL-------FLRKDGEWR-FPPLAAEQALHYLSQLIEGYREGMSAPLL 1036 L CA G+ + +L G + F P+ A QA LS + +++G PL+ Sbjct: 1066 LCLCAMQGSTDITRLNQPINSYLLDIGHFHVFAPITAAQAKSQLSLWLTLFKQGQVQPLM 1125 Query: 1037 VLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ 1096 +P + A+++ + + + + GEG + +QRL+R Sbjct: 1126 FMPRTALAYVEA------------EGDHTQKLREAQPKWLDEQSQLGEGMEPHFQRLYRF 1173 Query: 1097 LTPETMEAIVEQSQRFLLPLFR 1118 + + + +Q L PL Sbjct: 1174 PEDFSEQHFGDTAQTLLSPLIS 1195 >UniRef50_A3QEU7 Exodeoxyribonuclease V, gamma subunit n=4 Tax=Shewanella RepID=A3QEU7_SHELP Length = 1192 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 396/1202 (32%), Positives = 606/1202 (50%), Gaps = 111/1202 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERE-RLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML + SNR++ L L+ ++ P E ILVQS GM+ WL++ ++++ +AA Sbjct: 1 MLYLVQSNRMEALAELLANELQTPLPGQSPLSNEQILVQSPGMSTWLRLAIAKQNQVAAA 60 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 ++FPLP+SFIW + ++LP++PKE+AF K +M+WKLM LLP LL +E F L +YL DD+ Sbjct: 61 LEFPLPSSFIWQLCHQLLPDVPKENAFTKPAMTWKLMELLPGLLSQEVFAPLANYLKDDA 120 Query: 120 --------DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL-----VEGLGEAQAWQA 166 KLFQL S+ AD+FDQYLVYRPDW+ WE G L Q WQ+ Sbjct: 121 ILTDSAAPHSLKLFQLCSQIADIFDQYLVYRPDWILAWEQGEDRLPPKERPLDANQQWQS 180 Query: 167 PLWKALVEYTHQ-LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQ 225 LW+ L+ Y H L Q R+HRANL+Q + L LP R+F+ GIS++ P L+ Sbjct: 181 LLWRELIHYNHHTLNQSRYHRANLHQALFDALSDPLCDLSKLPPRLFVFGISSMAPQTLE 240 Query: 226 ALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQ 285 L L K I++ +L +PC++YWGDI DP A++ + Sbjct: 241 VLYFLAKRIDVVMLNLSPCQHYWGDIVDPKLRARMALQYGDKQQLA-------------- 286 Query: 286 LFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL---ESSQELDAFVDVTPDNLLHNIQSDI 342 + + + +VGNPLLA+ GK+GR+ + L+ +L +++ + + D ++LLH +Q DI Sbjct: 287 -IDWESKLEVGNPLLANNGKMGRELLDLILELPENDTNFNFECYQDPGSNSLLHGVQQDI 345 Query: 343 LELENRAVAGVNIEEFS-RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 LEL R E + +R L D S+T CHSP RE+E LHD LL L + Sbjct: 346 LELCTRGETLGPDAELYLTTKGRRVLKIDDDSLTLRSCHSPLRELETLHDHLLEQLSQSD 405 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 L P+DI+VM+ D+ +Y+P+I AVF S D ++PYAI+DR A Q P++ +F+ LL L Sbjct: 406 GLAPKDIVVMMPDVAAYAPYIDAVFASKRGDHFIPYAIADRGAAQESPLINSFLHLLGLN 465 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 SRF D+L +L+VP + RFD+ ++ L +R+W+ ++G+RWG D + + +LPA Sbjct: 466 KSRFALTDILGILEVPAVMRRFDLDDDDLLLIRRWLEQAGVRWGRDQHSRQAQQLPAFEH 525 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 ++W FG+ R++LGY+ + L G A+ +G L + + ++ + L + Sbjct: 526 NSWAFGIKRLILGYSFSDEAPIYHDSLALPGVEGQSAQALGKLLNFIEAIDEFNLALGEH 585 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 PL + + ++ F+ E + + Q + E QY + L ++++ Sbjct: 586 CPLSVRITQLQTLVETFYDCVDEELSQKQELLQAITRLSEELTATQYQSELELEVMQNWF 645 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK- 700 + L + R+ QR+LAG VN CTLMPMRSIPF +VCLLGMNDGVYPR P+GFDL++Q+ Sbjct: 646 TRHLTESRVGQRYLAGSVNFCTLMPMRSIPFMLVCLLGMNDGVYPRVQHPVGFDLVAQEG 705 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG---- 756 P++GDRSRR DDRYLFLEAL+SA+++LYISYIG S +DNSER PS+LV ELI+Y Sbjct: 706 PRKGDRSRRLDDRYLFLEALLSAREQLYISYIGHSERDNSERIPSMLVSELIEYCQLCYL 765 Query: 757 --------QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE---------- 798 + + + E + L PFD + Y E Sbjct: 766 PENCAHLLKGSNADDTSTADIAKIELAILDQLIITMPLQPFDERLYLADESEGAECEGAK 825 Query: 799 ------RQSYAREWLPAASQAGK-----------------AHSEFVQPLPFTLPETVPLE 835 RQSY+ +W P A + E + L Sbjct: 826 SEPRRLRQSYSEQWCPRALTEQDKQHDGEQGAKPASAGHFIEAPLSLVADEDKGEPLELS 885 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV---EQD 892 L RF+ +P + FF L+++ + EPF L LSRYQ+ L+ V ++ Sbjct: 886 ALIRFYRNPAQYFFNRTLKLDLNLSIQADENDEPFALNPLSRYQLQSTLIEDAVKSGDER 945 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP-GQSMEIDL---ACN 948 + L R R +G LP F ++ + +++ L R + + + +IDL Sbjct: 946 PSSELLERLRLSGQLPLAPFDDLLLKQYQHDIRALVGRTLYLQGESSHTQDIDLLLSDSA 1005 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCAS-----------GGNGESR 997 + G + V GL+ +RP + ++++L HL AS + Sbjct: 1006 ATALVGRIDGVSAKGLVNYRPGTANARDLIRVYLRHLCLNASVSDNSDVERHEATPWQRH 1065 Query: 998 LFLRKDGEWR-FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDA 1056 +L G + F P+ EQAL+ LS E Y +G S PL +P + A+++ Sbjct: 1066 SYLLDIGHFHAFAPITPEQALNQLSLWAEHYHQGQSQPLPFMPRTAFAYVEA-------- 1117 Query: 1057 MLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPL 1116 + + + GEG + YQRL+ + + L P+ Sbjct: 1118 ----EGEHIEKLIAAQPQWLDEQSNLGEGQEAHYQRLFTFPDDFSEAGFGTIASTLLSPM 1173 Query: 1117 FR 1118 Sbjct: 1174 LS 1175 >UniRef50_A6W0B0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Marinomonas RepID=A6W0B0_MARMS Length = 1131 Score = 641 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 428/1155 (37%), Positives = 633/1155 (54%), Gaps = 61/1155 (5%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M ++Y SNRL+ L L+ I+ ++PF+ E ILVQ+ GMAQWL+M L++ IAA + Sbjct: 1 MFQLYTSNRLEDLAVLLAKILAVSPPENPFDDEFILVQNPGMAQWLKMFLAESHSIAAGL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FPLP++F+W F + L +IP +S FNK + W+LM LL L +F L YL +D Sbjct: 61 VFPLPSTFVWQTFAQSLDDIPAQSEFNKPFLVWRLMRLLDSRLGDPEFQALSWYLEEDDT 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEG----LGEAQAWQAPLWKALVEYT 176 + + FQL S AD++DQYLVYRPDW+ WE G + + E Q WQA LW+ LV Sbjct: 121 QIRRFQLCSSIADIYDQYLVYRPDWIKSWEGGEAQDPKLTAIFEQQPWQAILWRDLVADV 180 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGK--HI 234 Q G +HR NL + + ++ P G+P R+FI G+S+LPP L++L+ L I Sbjct: 181 SQRGTSLYHRGNLIEALHDK-TQSSARPVGVPERIFIFGVSSLPPNTLESLRVLAASGWI 239 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 ++HL NPCR+YWGD+ D YL + + R + ++D Sbjct: 240 DVHLFLQNPCRFYWGDVVDKHYLGREIKR-----------------QTLKPGLSTDTLHL 282 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVT---PDNLLHNIQSDILELENRAVA 351 NPLLASWG+LGRDYI L ++ + EL F D LL IQ D+L LEN Sbjct: 283 DANPLLASWGRLGRDYIAQLQEMADN-ELVVFEDYRTEQSTGLLQWIQQDVLTLENHGSQ 341 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + + + P+ D SI H+CHSP REVEVLHD+LL M E DP+LTP+DIIVM Sbjct: 342 QERDAKIRDASYRHPIAADDQSIRVHLCHSPLREVEVLHDQLLQMFESDPSLTPKDIIVM 401 Query: 412 VADIDSYSPFIQAVF----GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 + D+++YSPF++AVF GSA +++P+A+ D+ +P+++A++ LL L +SRF Sbjct: 402 LPDVNTYSPFVKAVFGSVKGSAQGRKHIPFALIDQSGGMENPIVDAYLYLLGLGESRFTL 461 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 +++++L+VP + ARF++T + L +RQW E GIRWG+D ++ +LP HTW G Sbjct: 462 SELISVLEVPAVLARFELTADELERIRQWSTEVGIRWGLDGKTAQQHDLPMQESHTWLNG 521 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 + RMLLGYAM W+ L Y + GL A + G LA L+ +N + L + +EW Sbjct: 522 VRRMLLGYAM-GHDHIWEGTLSYGDVEGLEASVAGKLAEFLVAINDAQAKLMESLAPKEW 580 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 + + FFL D + L+ +Q A+ + A + + +LR L+ L + Sbjct: 581 ISTLYYLAERFFLVDEDDA-FPALLSKQLDALTLQWQQAHFDAPLDQQVLRQLLSPLLQE 639 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + QRFLAG VN CTLMPMRS+PFKV+C+LG+N+G YPR +AP+GFDLM + + GDRS Sbjct: 640 SQGGQRFLAGRVNFCTLMPMRSVPFKVICVLGLNEGDYPRSVAPMGFDLMVGQYRSGDRS 699 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 RR+DD+YLFLEAL+SA+ YISY+GRSIQDNSE+ PS+LV EL++YIGQS GD+AL Sbjct: 700 RREDDKYLFLEALMSARDCFYISYVGRSIQDNSEKNPSILVSELLEYIGQSCVFEGDQAL 759 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQP-------------GERQSYAREWLPAASQAG 814 D+++ + L H PF+ Y SY +WLPA Sbjct: 760 TPDDAQKALLEKLILEHPLQPFNAAYYFQPQGSSHESTDQFDKRLYSYDEQWLPALLSVP 819 Query: 815 ---KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI 871 +A + + L+ L RF HP R F Q RL+ ++ E + EPF Sbjct: 820 VDEEAQAFSPLEGLEQPRIDLALDELSRFIGHPTRYFTQRRLKAYLSLQEEEEKEDEPFA 879 Query: 872 LEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV 931 L+GL+ YQ+ + LL A+++ D ++ R G LPYGA G + + + +QL + Sbjct: 880 LDGLAGYQLREGLLQAMLKG-DEDQFVERLSLMGALPYGALGRLSLQQSRGQCRQLLSVL 938 Query: 932 IAC-RQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCAS 990 + + +E++LA + + WL L +R LS Q MQ+W+EHL CA Sbjct: 939 QGYALEECEPIEVNLAMGSIVLQAWLDLPTATTRLSYRIGDLSAHQKMQMWIEHLALCAQ 998 Query: 991 GGNGESRLF----LRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWL 1046 G E L K + F + A YL+ ++ ++G+ P+ + +S AW Sbjct: 999 GTPKEHHLINLTKTGKLLQHSFIIIPPNDAQDYLNTMLALLQQGLCQPIALPAKSADAWC 1058 Query: 1047 KTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIV 1106 K+ ++ + D D ++A + + R E DD ++QR + L + V Sbjct: 1059 KSYCSSK--TLEDADIAWEQALKLYQD--NSSAFTRSEVDDAYWQRYFPDLNRQ-KAQFV 1113 Query: 1107 EQSQRFLLPLFRFNQ 1121 ++ LP+ R + Sbjct: 1114 SLCEQIWLPMHRHLE 1128 >UniRef50_A1AQY6 DNA helicase/exodeoxyribonuclease V, gamma subunit n=2 Tax=Desulfuromonadales RepID=A1AQY6_PELPD Length = 1061 Score = 636 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 363/1121 (32%), Positives = 537/1121 (47%), Gaps = 93/1121 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L + SNR++ L + +++ L PF PE+++VQS GM +WL M L++ FG+ AN Sbjct: 3 LTICTSNRMENLVEALCDVLKT-PLSSPFTPEILVVQSKGMQRWLAMKLAETFGVWANCT 61 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 +P P +W++F++ PE+P S F+ + M+W++M LLP L R++FT L HYL D D Sbjct: 62 YPFPNKVVWELFMKAFPELPDTSRFSPEVMTWRIMGLLPAFLGRQEFTPLNHYLDGDGDG 121 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 K FQL+ K AD FDQY ++RP+ L WE G + WQ LW+ L Sbjct: 122 LKKFQLAGKIADTFDQYTLFRPNMLLDWEGGKGGD-------WQELLWRELAT-----AD 169 Query: 182 PRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 HR + Q FI+ L LP R+ + GIS LP +L + KH + L Sbjct: 170 NGQHRGRIKQDFIKLLAQGHAEKESLPERIMVFGISYLPSYHLDIFTEIAKHTTVSLFLL 229 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA 301 +PCR YWGDI +++ +R + GNPLLA Sbjct: 230 SPCRQYWGDIVSAKQMSRRPPEERA-------------------------YLEEGNPLLA 264 Query: 302 SWGKLGRDYIYLLSDLESS--QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 S GKL RD+ ++ + S ++D ++D LL IQSDIL L Sbjct: 265 SLGKLARDFSNMVVEAGSIATDDVDLYLDPGEGLLLEAIQSDILNL----------RGTE 314 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 D+KR + P D S+ H CHSP RE+EVLHD LL +LE++ LTPRDIIVM DI++YS Sbjct: 315 GGDSKRRISPQDRSVQIHACHSPMREIEVLHDNLLFLLEQEKGLTPRDIIVMTPDIETYS 374 Query: 420 PFIQAVFGSAPAD-RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 P+I VFG + +P++I+DR + + + LL LP SR V +L Sbjct: 375 PYISMVFGGCQDPLKKIPFSIADRTLAKEGQIASVILKLLELPGSRLSVTRVFDILQSAP 434 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 ++ RFD+ + L +R W+ ++ IRWG D+ + L LP +++WR GL R++LGYAM Sbjct: 435 VSRRFDLDIQELETVRSWIEDTRIRWGADESHRSSLGLPHYRENSWRAGLDRLMLGYAMP 494 Query: 539 SA-QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + +LPYDE G + +G LA + ++ R LA +R L EW ML+ Sbjct: 495 EEGDFLFHGILPYDEMEGDATQALGKLAEFVARIERLARDLAAKRTLTEWRDAITTMLSD 554 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 F D + + I Q++ G A + + V L ++R LA RL +E FL G Sbjct: 555 FAAADDDLAHELASINGVVQSLEDLGAKAGFSETVDLVVIRSWLASRLGEEEKGLGFLTG 614 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V C ++PMRSIPF+VVCL+GMND +PRQ P GFDL+++ P+ GDRS RD+DRYLFL Sbjct: 615 GVTFCAMLPMRSIPFRVVCLIGMNDAAFPRQSRPPGFDLIARNPQPGDRSLRDEDRYLFL 674 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 E L+SA+ Y+SY+G+S++DNS PSVLV E +D IG E ++ Sbjct: 675 ECLLSARTHFYLSYVGQSVKDNSAIPPSVLVSEFLDAIGAGFT----------SGEMTLE 724 Query: 778 AHLTCLHTRMPFDPQNYQ-PGERQSYAREWLPAASQAGKAHSEF------VQPLPFTLPE 830 L H F + SY+ E A A + E Sbjct: 725 QRLVTSHRLQAFSRSYFDATSGLFSYSAENCAALLDATQRSGEPALFITHPLKAAPEEMR 784 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE 890 V L L RF+A+P + + RL++ + + D EPF +EGL Y INQ+LL ++ Sbjct: 785 EVTLAQLVRFYANPAKYLLENRLKIRLEEVSTPLDDREPFAVEGLEAYGINQELLEKRLQ 844 Query: 891 QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME---IDLAC 947 L+ R G LP GE + E+ L ++ +E Sbjct: 845 GGSVHGLYATTRCRGILPPAQHGETVFADALAEVDNLVKKIGERTGGQPRLEAFFFHETI 904 Query: 948 NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN--GESRLFLRKDGE 1005 +++G L + + + +R + L ++ W+EHL+ A L + KDG Sbjct: 905 GDFKLSGSLDGIWKERKISYRCAKLKAKDEIRGWIEHLLLNAFAPEGYPRESLVIMKDGS 964 Query: 1006 WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQ 1065 F P+ E L L++ Y +G+ PL P S + + Sbjct: 965 TGFGPV--EHPTEQLGALLDCYWQGLHLPLRFFPASSLEFASSG---------------- 1006 Query: 1066 KARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIV 1106 + +E M GE D ++ + Q + Sbjct: 1007 -LLKNARKKWESGYMHTGEEADPHFRLCFEQDADPLNKEFE 1046 >UniRef50_Q3ASJ4 DNA helicase/exodeoxyribonuclease V, gamma subunit n=8 Tax=Chlorobiaceae RepID=Q3ASJ4_CHLCH Length = 1127 Score = 634 bits (1635), Expect = e-180, Method: Composition-based stats. Identities = 390/1145 (34%), Positives = 589/1145 (51%), Gaps = 82/1145 (7%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L +Y SNR+++L + +V + L FE E+I+VQS GM +WL M L+ +FG+ AN Sbjct: 33 LHLYTSNRMEMLVDSLAEVVR-QPLASVFEHEVIVVQSRGMQRWLSMELAGRFGVWANGR 91 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 +P P + + ++F ++LP + + AF K+ MSW++M LLP LLE +F LR Y DDSD Sbjct: 92 YPFPNAMVQELFKQLLPSVAQSDAFKKEVMSWRVMRLLPHLLEMAEFLPLRRYAADDSDG 151 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 KLFQLS K AD FDQY ++RPD LA WE G V G +AWQ LW+ALVE Sbjct: 152 LKLFQLSEKIADTFDQYTLFRPDMLALWEAGGGVAEGG--EAWQPLLWRALVEGAG---- 205 Query: 182 PRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 HR L + L +++ LP R+ + GIS LP +L+ A+ + E+HL Sbjct: 206 --LHRGQLRELLFRQLSRSSSKISELPERITLFGISYLPQFHLELFAAVARLTEVHLFLL 263 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA 301 +P + YWGDI +A+L ++ E GNPLLA Sbjct: 264 SPTQEYWGDIVSRKAMARLSEAEQALRSE-------------------------GNPLLA 298 Query: 302 SWGKLGRDYIYLLSDLESS--QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 S G++GRD+ ++ ++ + + D D+LLH +Q DIL L+ Sbjct: 299 SLGRIGRDFSEMVLEMSDEALDSQEFYDDPPEDSLLHALQWDILHLQGA---------GE 349 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 + R L P D S+ H CH+P REVEVL+D +L +LE P ++ RDIIVM DI+SYS Sbjct: 350 MDETPRLLQPHDRSVQIHACHTPLREVEVLYDAILGLLEAHPHISLRDIIVMTPDIESYS 409 Query: 420 PFIQAVFGSAPADRY-------LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 P+I VFG+A LP++I+DRR + A + LL+L SR + + Sbjct: 410 PYIATVFGTAREAGKEGKGVVALPFSIADRRMMHEGEIASALLKLLALHGSRLTASMLFD 469 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 L P ++ F E LR +R W+ SGIRWG+D+++ RE LPA H+WR GL R+L Sbjct: 470 FLASPPVSRAFGFDAEALRLIRGWIEGSGIRWGMDEEDRRERNLPAYRDHSWRAGLERLL 529 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 LGYAM + +Q VLPY + +G AE++G A + L + R LE W Sbjct: 530 LGYAMPEEEQLFQGVLPYGDIAGSAAEMLGRFAEAVEALERFVSSSEPSRTLEAWRQQYA 589 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 L FF PD ++E + + + G+ A + + + + L RL+++ Sbjct: 590 MWLTTFFAPDEDSEREFATLATLGEELAEYGINAGFEENISPLVFFTWLRSRLEEQEQGL 649 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 F+ G + C ++PMRSIPF+VV L+GMNDG +PRQ FDL++++P++GDRS R++D Sbjct: 650 GFMTGGITFCAMLPMRSIPFRVVMLIGMNDGAFPRQSRAPSFDLITRQPQKGDRSLRNED 709 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 RYLFLE+++SA++ LYISY+G+SI+DNSE PSVLV EL+D + ++ LP + Sbjct: 710 RYLFLESILSARELLYISYVGQSIRDNSEIPPSVLVSELLDAVRRAFVLPNE-------- 761 Query: 773 EARVKAHLTCLHTRMPFDPQNY-QPGERQSYAREWLPAASQAGKAHSEFVQ--------- 822 + ++ HL H PF + + SY+ E A + ++ Sbjct: 762 -SSIEQHLVVRHRLQPFHHDYFSEHSPLASYSSENYYALIASEQSLQAVPPIRSFISTAL 820 Query: 823 PLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 P TV LE L F+ +P F + RL + + D+EPF +E L RY++ Q Sbjct: 821 SEPTAEWRTVQLEQLLHFYDNPSAFFLEQRLGIKPEGLLLPLQDSEPFAVESLERYRLQQ 880 Query: 883 QLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ--- 939 +LL A + AE L F++ G LP GE+ + T QE+ A + Sbjct: 881 ELLEAQLRGQPAEALLPLFKSRGMLPPAQHGELLFATVMQEVDDFAATLRQHLAGEVALA 940 Query: 940 SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASG--GNGESR 997 +E+D+ +I G L + + +LR+RP+ + V + W+EHL+ CA G + Sbjct: 941 PLEVDIEVGEFRIVGRLDGIWANAMLRYRPARMKVRDRFRWWIEHLLLCALQPTGYPLTT 1000 Query: 998 LFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAM 1057 L DGEW +PP+ + +L+ L++ Y +G+ PL P S A++ DA + Sbjct: 1001 HMLMSDGEWSYPPI--DNPHQHLTTLLQRYWQGLCEPLPFFPRSAYAFVLKGMDA--NHH 1056 Query: 1058 LDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLF 1117 LD + A ++ N +GEG D QR + + +E + P+ Sbjct: 1057 LDVGKGIDAAYREWRDDTFTN--RKGEGSDSAIQRCFGAAANPFSDTFIELALELFTPMM 1114 Query: 1118 RFNQS 1122 + Sbjct: 1115 EAMGA 1119 >UniRef50_A1S6U9 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Shewanella amazonensis SB2B RepID=A1S6U9_SHEAM Length = 1163 Score = 634 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 397/1151 (34%), Positives = 605/1151 (52%), Gaps = 72/1151 (6%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M + SN ++ L + + + + E ILVQS GMA WL++ ++ GIAA + Sbjct: 1 MFTLVQSNHMERLAKRLADEL-NQASGNVLATEQILVQSPGMATWLRLEIAAHNGIAAAL 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FPLP++FIW + +LP +PKE+AF K +M+WKLM LLP+L+E+ F LR YL+ D Sbjct: 60 SFPLPSNFIWSLCYALLPGVPKENAFTKDAMTWKLMALLPRLIEKPHFEPLRDYLSSD-S 118 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGH-----------LVEGLGEAQAWQAPLW 169 KLFQL+S+ AD+FDQYLVYRPDW+ WE G L + WQ LW Sbjct: 119 PLKLFQLASRVADIFDQYLVYRPDWIVTWELGENDLSPTGSPLTQGAALPDNCLWQPLLW 178 Query: 170 KALVEYT-HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQ 228 +ALV+Y +LGQ WHRANL+Q + L + T LP R+F+ GIS+LPP L+ L Sbjct: 179 RALVQYNRDELGQSHWHRANLHQALVAALSNPNTDISALPRRLFVFGISSLPPQTLEVLY 238 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 ALG I + +L +PCR YWGDI D AKL + + + + Sbjct: 239 ALGSRIPVTMLSLSPCRQYWGDIVDSKLRAKLALKYKA---------------HKMLPEH 283 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ---ELDAFVDVTPDNLLHNIQSDILEL 345 + +VGNPLLA+ GK+GR+ + L+ L + + +LL +Q+DIL++ Sbjct: 284 WEETLEVGNPLLAANGKMGRELLDLVLSLPPEHFTLDDSGYETNDDSHLLGRLQNDILDM 343 Query: 346 ENR-AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT-L 403 E A ++ + ++ K LD D+S+ CHSP REVE LHD LL +L + L Sbjct: 344 EVAGAPLCADLARYQSNEGKFLLDEQDNSLVLRSCHSPLREVETLHDHLLGLLSDRQGRL 403 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 + ++I+VM+ D+ +Y+PFI AVF S + Y+PYAI+DR A + P++ F++LL + S Sbjct: 404 SAKNIVVMLPDVAAYAPFIDAVFASRRGEHYIPYAIADRGAVEESPLIHGFLTLLDINHS 463 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 RF ++L LL++P + A+F + EE L L W++E+G+RWG D + +L LPA +H+ Sbjct: 464 RFGLSEILGLLEIPAVMAKFKLDEEELSRLGNWLSEAGVRWGRDAQSREKLGLPAFDKHS 523 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 W FG+ R+LLG+++ + LP+ G A+ VG L + L+ + A Sbjct: 524 WAFGIRRLLLGFSLGDEGDFYHGTLPFAGVEGQQAQCVGKLLDFIEHLDEFAARFAAADS 583 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW----QAIIAEGLGAQYGDAVPLSLLRD 639 L + + F P E + + LI + +A+ + + L ++ Sbjct: 584 LTLKFAELSRLTDTLFAPLPEYQEELNLIRETLCDTQKALQSSASSESSLSDISLEVICQ 643 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 L +L R+ QRFLAG VN CTLMPMRSIPFKVVCLLGMN+G+YPR P+GFDLM++ Sbjct: 644 TLGSKLTDARVGQRFLAGSVNFCTLMPMRSIPFKVVCLLGMNEGIYPRVQHPVGFDLMAK 703 Query: 700 KP-KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 P +RGDRSRR DDRYLFLEAL+SA+++LYIS+IGRS +D+SER PS+LV EL+D Sbjct: 704 TPARRGDRSRRLDDRYLFLEALLSAREQLYISFIGRSERDDSERLPSMLVSELLDCCE-- 761 Query: 759 HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY--QPGERQSYAREWLPAASQAGKA 816 L+ S+ ++ L PFD + Y S+A +W P ++ K Sbjct: 762 --------LSAYVSQGKLVNRLVKQQPLQPFDHRLYLTNQDITASFAAQWCPQETRPPKP 813 Query: 817 H-SEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 + + + + L +L RF+ P R F Q RL+++ + D+EPF ++ L Sbjct: 814 FIDAVLDEVDEDEHKVLELASLIRFYRDPARFFCQRRLRLDLSHRLDALDDSEPFDVDAL 873 Query: 876 SRYQINQQLLNALVEQDDA------ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 RYQ+ ++LNA +E D+ + L R AG LP F ++ + + +++ + D Sbjct: 874 GRYQLQDKMLNAALEADEIRQQLAVDTLCDRLAGAGVLPMAPFDKLLFASYQRDLAPILD 933 Query: 930 RVIACRQPGQSMEIDLAC---NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV 986 R + + ++ G ++ G + +V GLL RP + L+L HL Sbjct: 934 RCRFIMGETEGQSLRISLVLNQGHKLVGTIDKVFAKGLLVARPGTAKAKDVLALYLRHLC 993 Query: 987 YCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWL 1046 CAS G +S L F PL + AL L I Y E + P ++P ++ Sbjct: 994 LCAS-GYRQSSFLLDVGNFHAFLPLTPDNALTSLEDFISHYFESVRTPSPLIPALAMTYI 1052 Query: 1047 KTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIV 1106 + + ++ +++ + ++ GE + +RL+ A Sbjct: 1053 EALAEG---------ASEEESLAELSTKWDDG-NGMGEIAEPHNERLFEFPASFATPAFT 1102 Query: 1107 EQSQRFLLPLF 1117 ++R PL Sbjct: 1103 VVAERLWKPLL 1113 >UniRef50_Q1LST9 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Baumannia cicadellinicola str. Hc (Homalodisca coagulata) RepID=Q1LST9_BAUCH Length = 1098 Score = 633 bits (1633), Expect = e-180, Method: Composition-based stats. Identities = 492/1132 (43%), Positives = 702/1132 (62%), Gaps = 51/1132 (4%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +Y SN+LDV+ +++ ++ +L + +PE+ILVQ+ + QWLQ+ L+ GIAANI Sbjct: 1 MFTIYQSNKLDVITSILISLISERKLRETLQPEIILVQNHNITQWLQVELAMSLGIAANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 F P FI+ + +LPE+ E F++ +SWK+ +LP ++ + +L+R YL +D D Sbjct: 61 RFSTPTIFIYKLLSSILPEMNLEMFFSRSLISWKIRLILPHFYDQPNCSLIRQYLHNDVD 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 KRK F LS K ADLF QY +YRPDWL W+ G V LG Q WQA LW+AL+E Sbjct: 121 KRKQFHLSEKIADLFYQYFLYRPDWLEIWQQGKRVASLGPDQNWQALLWRALIEENMLS- 179 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 NLYQ FI+ ++ T P GLP R+FI +S+LPP+YLQ LQAL HI+IH + Sbjct: 180 ------TNLYQLFIQAMKHMTVRPSGLPDRIFIYAVSSLPPIYLQVLQALSNHIDIHFML 233 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NP R ++ ++ + NPLL Sbjct: 234 VNPYR-------------FNRINKQSYTQQPIYSTNTNQKSI--------------NPLL 266 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 WGK G+D I LLS+L++ Q++DAFV+ L +S + L+ + + Sbjct: 267 EYWGKQGKDTISLLSELKNIQKIDAFVE------LSQEKSLLSLLQLDILEDNIVCHLHN 320 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + KR L D S++ +VCHSPQRE+EVLHD +LAM+ ++ +L P +IIVMV DI+ Y P Sbjct: 321 AKVKRLLQHNDHSLSINVCHSPQREIEVLHDAILAMIAQEQSLLPCEIIVMVTDINLYIP 380 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 I+AVFG+A DRYLP+ I DR + ++PVL F+ LL LP SR E+VL+LLD VLA Sbjct: 381 AIKAVFGNATTDRYLPFTIYDRTVKHTNPVLSVFLRLLKLPFSRLTIEEVLSLLDTSVLA 440 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 F I++ L LR+W+ ESGIRWG+DDD R+L LP T QHTW FGL RMLLGYA++S+ Sbjct: 441 KHFSISQIDLTILRKWIVESGIRWGLDDDTQRDLMLPTTSQHTWEFGLNRMLLGYAIDSS 500 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 G WQ +LPYDESSG AEL+G+LA L+M+L WR+ L + R L EWL DM+ FF+ Sbjct: 501 NGIWQGILPYDESSGKRAELIGNLAELIMRLRRWRKNLKKPRKLTEWLHCASDMIKDFFV 560 Query: 601 P--DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 + E E A+ +I QWQ I+ G+ A Y V ++ L DEL RL Q+ ++Q F++ Sbjct: 561 TNVNKEVETALVIILDQWQQILQCGIKANYDQPVSIARLYDELNMRLQQKHLNQSFISSN 620 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 + CT+MP SIPFKV+CLLGMNDG+YP + PL FDLM Q+P+RGD +R D+DRY+FLE Sbjct: 621 IIFCTIMPTSSIPFKVICLLGMNDGIYPHSILPLNFDLMKQQPRRGDYNRYDEDRYIFLE 680 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 L+SAQQKLYIS+IG IQDN+ R PS+L+ EL +YI Q+ YL GDE L+ ++ Sbjct: 681 LLLSAQQKLYISFIGYFIQDNTLRSPSILISELTNYITQNFYLSGDEQLDEHTCNLHIRK 740 Query: 779 HLTCLHTRMPFDPQNYQPGER-QSYAREWLPAASQAGKAHSEFVQPLP------FTLPET 831 HL H+RMPF P+N+ PG QS+A+EWL AA + ++++ + Sbjct: 741 HLWQWHSRMPFAPENFIPGSINQSFAKEWLLAAKASFRSNNTQNRFFMNKSLATKKQENM 800 Query: 832 VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ 891 + L L++F+ HPVR +FQ RL + E +I + EPFI++G+S Y+I +++LNAL+E Sbjct: 801 LLLANLKKFYQHPVRTWFQQRLDLWLYNEPQDISENEPFIVKGISHYKIKEKILNALIEG 860 Query: 892 DDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC-RQPGQSMEIDLACNGV 950 + + ++++ RAAG L YGAFG+++W QC +M L D++ + +I L + Sbjct: 861 KNLDVIYQQVRAAGLLAYGAFGKLYWTKQCSKMIYLVDQIRTYILPEQHTEKIQLNIDNT 920 Query: 951 QITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPP 1010 + GWL ++Q +GL+RW P LS+ G+QLW+EHL YCA GGNG+SR+F W FP Sbjct: 921 VLIGWLSKIQCNGLVRWYPHNLSMKHGLQLWIEHLAYCAIGGNGQSRMFGTNSQ-WCFPV 979 Query: 1011 LAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTK 1070 L++++A YL LI+GY +GMS PLL+L SGGAWL C++ + + + + AR Sbjct: 980 LSSDEAKKYLLTLIKGYWQGMSEPLLLLNRSGGAWLTHCFNKKTRMINWEKDCQRTARNY 1039 Query: 1071 FLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS 1122 ++A+EGN + GE D++ Q+L QL + AI++ + + LP +FN S Sbjct: 1040 MIKAWEGNHLFPGESSDLYLQKLILQLNENYIIAIIKAVECYFLPPLKFNIS 1091 >UniRef50_Q2LTC9 Exodeoxyribonuclease V gamma chain n=2 Tax=Bacteria RepID=Q2LTC9_SYNAS Length = 1113 Score = 630 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 374/1141 (32%), Positives = 564/1141 (49%), Gaps = 67/1141 (5%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L + SNR++VL + ++ L P PE+I+VQS GM +W+ M L+ GI AN+ Sbjct: 4 LNIIASNRMEVLAEKLADVLAG-PLSSPLTPEIIVVQSRGMERWVSMQLAAFHGICANVR 62 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 FP P I D+F VLP E FN + +W++M+LL R F L YL DDS Sbjct: 63 FPFPRRMIQDIFHAVLPGWEAEQDFNPELAAWRIMSLLTVASSRPGFEPLAAYLHDDSQG 122 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 K FQLS + A LFDQYL++RP+ + WE G+ +WQA LW+ VE Sbjct: 123 LKRFQLSRQIARLFDQYLIFRPEMILNWEKRISD---GDEYSWQADLWRLFVEEGK---- 175 Query: 182 PRWHRANLYQRFIETL-ESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 H A L + + LP R+ I GIS LPP YL A+ +E++ Sbjct: 176 -IVHPAVLRLSLQDVMIRRGNQLSACLPERISIFGISYLPPFYLDIFLAVSSFMEVNFFL 234 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NP R +W DI+ +++ + + +L S+ + GN LL Sbjct: 235 LNPSREFWFDIRSSREISREVKLVKG---------SVEKGMENEELSRSELYLEEGNSLL 285 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 AS G LGR++ L + +E +V+ +LLH IQSDIL L Sbjct: 286 ASLGTLGREFWSFLGECSGREEEY-YVEPGETSLLHAIQSDILNLREGGGEADADG---- 340 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + + + S+ H CHSP REVEVLHD LL +LE DP+L P DI+VM +I++Y+P Sbjct: 341 ---REVMFSEERSLQIHACHSPMREVEVLHDSLLDLLEADPSLQPHDIVVMTPEIETYAP 397 Query: 421 FIQAVFGSAPADR-------YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 FI AVF + D +PY I DR PVL + +L LP RF + +VL+L Sbjct: 398 FITAVFETVDEDAPGLVDQPKIPYHIVDRATISGRPVLGGLLKILDLPLGRFAAGEVLSL 457 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 L+V + RF +TE + + +WV +SGIRWGID+ + LP ++W++GL RMLL Sbjct: 458 LEVAAIRNRFGLTEADIDQVSRWVADSGIRWGIDERSRLREGLPEIATNSWQWGLKRMLL 517 Query: 534 GYAMESAQ-GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 GYA+ + + ++P + + G A L+G LA +L + L+Q+R L +W + Sbjct: 518 GYALPARNNELFSGIMPCETAEGSEARLLGILAEFTERLFLTAESLSQDRTLSDWGSLLD 577 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 D+ + FFL D ++E + + Q + + + + L+++R L R Sbjct: 578 DISDRFFLGDEDSEPDIRNLRQLASDLKNLQEKTGFPEKISLAIVRSFLQDRFQATGADG 637 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 FL+ V C+L+PMRSIPF+V+CL+GMN+G YPR+ FDLM++ P+RGDRSRR+DD Sbjct: 638 GFLSRGVTFCSLLPMRSIPFRVICLMGMNNGDYPRRPQTPSFDLMARHPRRGDRSRRNDD 697 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 RYLFLEAL+SA+ LYISY+G+S++DNS PSV+V EL+DY+ + L Sbjct: 698 RYLFLEALLSARDTLYISYVGQSMEDNSRIPPSVVVSELLDYVRRGFVLKDCN------- 750 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV 832 + L H F P + + ++ + + +P E + Sbjct: 751 ---IDELLITYHPLQAFSPVCFTEESCRLFSYSEENRKAANTLLKRSSLTSIPGAEAERL 807 Query: 833 PLE----------TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 P + L F+ HP R F Q RL V D + + E F +EGL RY I Q Sbjct: 808 PEDPAMATQATIRDLIAFFRHPARFFLQRRLAVFLGEADIVLEENEHFDVEGLDRYGIEQ 867 Query: 883 QLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA--CRQPGQS 940 L+ +E E ++ A G LP+GA G+ ++ +++ + Sbjct: 868 LLMEKEIETGHMEEVYPVLAAQGLLPHGAVGQSRFDALKRDICHFVRSYKHILHSENIPP 927 Query: 941 MEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN---GESR 997 +IDL G +++G L + GLL +R + L ++LW+ HL+ A+ G Sbjct: 928 RDIDLEVAGFRLSGRLEGLGSRGLLHYRYATLKGKDHLKLWIMHLLLHATDGPDGGDRES 987 Query: 998 LFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAM 1057 L L K+G WR+ + ++A +L +LI YREG+ PL PE+ A+ + Sbjct: 988 LLLGKNGLWRYSAI--DEARCHLEKLISLYREGLCRPLHFFPETSWAYAVKILRNGELSE 1045 Query: 1058 LDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLF 1117 ++S +A+EG+ RGEG D + + + +P+ + E S PL Sbjct: 1046 EAEESA----WDAARKAWEGDDFQRGEGVDHYNRLCFGDFSPQDV-EFQELSLNVYRPLL 1100 Query: 1118 R 1118 Sbjct: 1101 E 1101 >UniRef50_Q080D9 Exodeoxyribonuclease V, gamma subunit n=6 Tax=Shewanella RepID=Q080D9_SHEFN Length = 1270 Score = 629 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 384/1263 (30%), Positives = 610/1263 (48%), Gaps = 171/1263 (13%) Query: 1 MLRVYHSNRLDVLEALMEFIV-ERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML + SN+++VL + ++ R E +LVQS GM+ WL++ +++ GIAA Sbjct: 1 MLTLIQSNQMEVLSEQLAKLLAIRLDNVSLLASEHVLVQSPGMSTWLRLEIAKHNGIAAA 60 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 + FPLP+SF W + +LP++PK++AF K +M+WKLM LLP LL+ DF+ L+ YL+ Sbjct: 61 LSFPLPSSFTWQLCHDLLPDVPKDNAFTKAAMTWKLMDLLPSLLDNPDFSPLKQYLSPQV 120 Query: 120 DK---------------------------------------------RKLFQLSSKAADL 134 D KLFQL + AD+ Sbjct: 121 DTTTDIAATDILDTDVDANTNTDIETETNIHTANSHAISQLNQSHDAIKLFQLCGRIADI 180 Query: 135 FDQYLVYRPDWLAQWETGHLVE------GLGEAQAWQAPLWKALVEYT-HQLGQPRWHRA 187 FDQYLVYRP+W+ WE + L E Q WQ LW+ L++Y H L +HRA Sbjct: 181 FDQYLVYRPEWILAWEQNQPLSSIDNRLALDENQQWQPILWRTLIDYNQHHLHASHYHRA 240 Query: 188 NLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYY 247 NL+ I TL + T LP+R+++ GIS++PP L L L I++ +L +PC++Y Sbjct: 241 NLHADLIATLANPDTDLSMLPARLYVFGISSMPPQTLDVLYHLASRIDLIMLSLSPCQHY 300 Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG 307 WGDI +P A++ + D + + + +VGNP+LA+ G++G Sbjct: 301 WGDIIEPKTRARMALQYANKKQLD---------------QDWEDKLEVGNPILANNGQMG 345 Query: 308 RDYIYLLSDLES---SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN- 363 R+ + LL L D +V+ P+NLLH +Q DIL++E + + Sbjct: 346 RELLDLLLSLPPEHTDFGYDCYVEPEPNNLLHGVQYDILQMETLGQPLGPNSSVYQDIHA 405 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 +R L P D SIT CHS REVE LHD LL +L + L+P+DI++M+ D+ +Y+P+I Sbjct: 406 RRTLLPSDDSITLRSCHSALREVETLHDHLLELLSNNSDLSPKDIVIMMPDVAAYAPYID 465 Query: 424 AVFGSAPADR-----------YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 AVFG+A + Y+PYAI+DR A Q P++ +F+SLL++ SRF D++ Sbjct: 466 AVFGTANSQYFADKNPQKGDYYIPYAIADRGAAQESPLINSFLSLLNINQSRFGLTDIIG 525 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 +L+VP + RF + ++ L +R+W++++ +RWG + +L + Q++W FG+ R++ Sbjct: 526 ILEVPAILRRFQLDDDELSLIRRWLDDANVRWGRSEQTRSQLGVQPFTQNSWAFGIKRLI 585 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 LGYA ++ L G ++ +G L + L ++ + A + E L + Sbjct: 586 LGYAFNDDADIYRETLMVQGIEGQSSQALGKLLNFLETIDTYFNLFANDYSTAERLEQLQ 645 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 +L + + + I + E A + V + +L+ QRL + R+ Q Sbjct: 646 QLLADCYDTTDDEREQIQAIRDALVTLDTELESAGHQGQVDIEVLKQWFNQRLTESRVGQ 705 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK-PKRGDRSRRDD 711 R+LAG VN CTLMPMRSIPFKVVCLLGMNDGVYPR P+GFDLM+ PK+GDRSRR D Sbjct: 706 RYLAGSVNFCTLMPMRSIPFKVVCLLGMNDGVYPRVQHPVGFDLMAHFGPKKGDRSRRLD 765 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG-------QSHYLPGD 764 DRYLFLEAL+SA+++LYISYIG S +DN+ER S+LV EL++Y L Sbjct: 766 DRYLFLEALLSAREQLYISYIGHSERDNAERIASMLVSELVEYCQLSYLPQSLQQQLEQQ 825 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 +N D+++ V A L PFD + ++ +++ L + A + Sbjct: 826 AEINLDDADKAVLAQLIQAQPLQPFDAKLFRETPLSAHSVNKLQHSFNAQWCPPPANATI 885 Query: 825 PFT----------------------------LPETVPLETLQRFWAHPVRAFFQMRLQVN 856 + L L RF+ +P + FF L+V+ Sbjct: 886 NNHIFFEQALPLSAEQADEVFAHTHINSEGIKVVELELSALIRFYRNPAQFFFNRSLKVD 945 Query: 857 FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE---QDDAERLFRRFRAAGDLPYGAFG 913 + + EPF L L RY + ++L+ +E L + + +G+LP F Sbjct: 946 LSLDIQADDNDEPFSLNALERYLLQSRMLDNAIEHQLDSPDFELLSKLKTSGELPMAPFD 1005 Query: 914 EIFWETQCQEMQQLADR--VIACRQPGQSMEIDLACN----------------------- 948 ++ +++ L +R + +Q ++ +DL + Sbjct: 1006 DLLINQYLRDISPLINRVQFLQDQQAMHTLNVDLNFDLPMQDFPAYALSVQGLPEQADTT 1065 Query: 949 -----GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL----- 998 V + G + + P GL+ +RP ++++L HL A + S + Sbjct: 1066 HSSIVRVNLVGRIDDILPKGLVNYRPGTAHGRDFIRVYLRHLCINAMANSSTSGMGKNQF 1125 Query: 999 -FLRKDGEWR-FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDA 1056 +L G + F P+ AEQA L + I G+ +G + PL +P++ A+++T Sbjct: 1126 SYLLDIGHFHAFAPITAEQAQAQLMRFISGFIQGQTQPLCFMPKTAFAYVET-------- 1177 Query: 1057 MLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPL 1116 D ++ K Q ++ GEG D QRL+ + + L P+ Sbjct: 1178 ----DGDHEEKLLKAQQKWDDGQNQFGEGHDPHNQRLFHFPEDFSEARFGALAIHLLQPM 1233 Query: 1117 FRF 1119 Sbjct: 1234 LSQ 1236 >UniRef50_Q15V11 DNA helicase/exodeoxyribonuclease V, gamma subunit n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15V11_PSEA6 Length = 1166 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 400/1195 (33%), Positives = 585/1195 (48%), Gaps = 108/1195 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIV--ERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAA 58 ML + SN+++ L A + + + LDD F P+++LVQS GMAQWL++ ++Q GI+A Sbjct: 1 MLHLVQSNKMESLAAYLIGWLGESKSSLDDIFSPDVVLVQSPGMAQWLKIEIAQALGISA 60 Query: 59 NIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 NIDFPLP+S+IW ++ + ++P++SAF K +M+WKLM++LP++ +R +F + YL DD Sbjct: 61 NIDFPLPSSYIWQLYKGHVNDLPEQSAFTKDNMTWKLMSILPEMSDRTEFASIAQYL-DD 119 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL--VEGLGEAQAWQAPLWKALVEYT 176 KL+QL K AD++DQYLVYRP+W+ WE G + AQ WQ LW+ALVEY Sbjct: 120 QQPLKLYQLCQKIADIYDQYLVYRPEWILAWEQGENNVADTDVSAQPWQPILWRALVEYA 179 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 +L + +HRANL+ R + LE + L +F+ G+SA+P L+ AL K ++ Sbjct: 180 KELDESPYHRANLHTRLMAELEDTKSSKDELKP-LFVFGLSAMPVQQLEIFSALAKSRDV 238 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 + + NP +YWGDI D + + + + L D VG Sbjct: 239 IIFWFNPSAHYWGDIVDNKQVLQAKLQSLLAQASEDAQ---------SGLSGMDDYLLVG 289 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 NPLLASWGK GRDY ++ LE DAF++ P++LL ++Q ++L L +R Sbjct: 290 NPLLASWGKQGRDYQDMILGLEVELH-DAFIEQEPESLLEHMQHEVLALTHRGAIEPLPA 348 Query: 357 E----FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 + K PL D ++ H CHS RE+EVLHD+LL + + P L P D+IVM+ Sbjct: 349 QELLTNGEEYPKIPLAEDDMTLQVHACHSAVRELEVLHDQLLHLFADHPELHPGDVIVMM 408 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 D+ SY+P I VFG ++PYAISDR A+Q P+L +FI L+SL SR DVLA Sbjct: 409 PDVASYAPIIDGVFGGTDKALHIPYAISDRNAQQESPLLNSFIQLMSLHQSRIGLSDVLA 468 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 L +VP + +FDIT E L W+ ++G+RWG D + LP Q+TW FGL R+L Sbjct: 469 LCEVPAVQRKFDITPEEFDLLSVWLADAGVRWGWDGQDKTRWALPNEPQNTWLFGLQRLL 528 Query: 533 LGYAMESA---QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 GYAM + + PY+ G +G +L L + Sbjct: 529 AGYAMGGESMFDDAHEPIAPYEHIEGQHVVALGKFYLFSRELGNALAFCQSAASLHAKIK 588 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 ++ +LPD + + + + Q + + Q+ + + EL Q L + Sbjct: 589 GALSLIEQLYLPDDDDQTYVLQLRQSLEQMT--VHEHQFSGEIVHDVFLAELEQSLSSKG 646 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ-KPKRGDRSR 708 + QRFLAG VN CTLMPMRS+PFKVVCLLG+NDG YPRQ+ P+GFDLM K +RGDRSR Sbjct: 647 VGQRFLAGYVNFCTLMPMRSVPFKVVCLLGLNDGDYPRQVVPVGFDLMRIGKGRRGDRSR 706 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 R DDRYLFLEA++SA+++LY+S+ G S +DNS R PS+L+ EL++Y Q+ L GDE+L Sbjct: 707 RLDDRYLFLEAILSARKRLYLSFQGFSAKDNSPRSPSILLSELLEYTQQTFCLAGDESLE 766 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF-- 826 + H+ H PF+P + A + Q L Sbjct: 767 TKTCADNLAKHIYHEHALQPFNPVYFATKRDAHEEEPLPSAMASFQTPWLALAQQLTDGS 826 Query: 827 --------------------TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 V L+ L F+++P +AFF R Q D Sbjct: 827 VHSDKEVDFCPAPLFSLPELAQVTEVELDELLIFFSNPAKAFFSQRWQTRLTRVYDVQSD 886 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 EPF L+ LSRY +LN + R RA G LP G +I + ++ + Sbjct: 887 DEPFELDALSRY-----VLNERFVTTQQQDWTTRLRAEGKLPTGNIADISLQPIRKQSRA 941 Query: 927 LADRVIACRQ------PGQSMEIDLAC-------------------------------NG 949 L D ++A P E++ Sbjct: 942 LIDALVALIGGPLDEVPPTRAEVNFELSYLLDISPVPASELNANTNSSTQNSVSATSTQR 1001 Query: 950 VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGG----NGESRLFLRKDGE 1005 +QITGW+ + L+ WRP + +QLWL L CA+G + + Sbjct: 1002 IQITGWVDNLYGGNLVLWRPGKVKGNNVLQLWLTWLALCANGSVAKHQRAYYIGVEDKEP 1061 Query: 1006 WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQ 1065 + + ++A L+ I +R G L P++ WL +A Sbjct: 1062 FSIGAVDKDEAKTQLAIFIRYWRLGQLQVLHFYPKTAYEWLSVGDEA------------- 1108 Query: 1066 KARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFN 1120 KA K A+ G+ +GEG++ +R+ L + A E S PLF Sbjct: 1109 KALMKAKNAFYGSYFAKGEGEEPHIRRVCPDLN-QHFCAFSEVSHALFDPLFDAL 1162 >UniRef50_Q65UM5 RecC protein n=9 Tax=Gammaproteobacteria RepID=Q65UM5_MANSM Length = 1167 Score = 625 bits (1610), Expect = e-177, Method: Composition-based stats. Identities = 429/1173 (36%), Positives = 642/1173 (54%), Gaps = 92/1173 (7%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 VYHSNRLDV + ++ +++ DDPF+ E+ILVQS GMAQWLQ+ +++K GIAAN+ Sbjct: 22 FTVYHSNRLDVQKDILIELMQLLPPDDPFQTEIILVQSPGMAQWLQLKIAEKKGIAANLK 81 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS-- 119 FP+PASFIW ++ VL ++ +++ FNK +M+W+LM L+PQ L F L +YL + Sbjct: 82 FPMPASFIWQQYINVLEDVSQQTQFNKDAMTWRLMQLIPQFLSEPCFQALENYLKNSPYS 141 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL------------------VEGLGEA 161 +++KL+QL+ K ADLFDQYLVYRP+W+ WE + + Sbjct: 142 EQQKLYQLARKVADLFDQYLVYRPNWIHAWENNQPESIEQAIGTYQKDDNPELITQIKRD 201 Query: 162 QAWQAPLWKALVEYTH-QLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 WQ LW+AL++ G HRANL+Q FI+ L SA P LP R+FI GISALP Sbjct: 202 IKWQGILWRALIDEVQRGAGYKVRHRANLHQAFIDKLRSA--KPENLPQRIFIFGISALP 259 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRE------L 274 YL+ +A+ ++ +IHL F NP R YWGDI D +L KL TRQR +E+ Sbjct: 260 QSYLETFEAMSRYCDIHLFFNNPSREYWGDIVDDRFLQKLQTRQRFDHYENNHTALLSSA 319 Query: 275 PLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL-----ESSQELDAFVDV 329 L + + + + VGNPLLA WGKLGRD+ YLL+DL E ++E+ AFVD+ Sbjct: 320 TLTNMQQENYEFSPDNEKLLVGNPLLAGWGKLGRDFFYLLTDLMTRAEEHNREIIAFVDL 379 Query: 330 TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVL 389 LL +Q IL+L AV +N + D+S+T H CHS REVEVL Sbjct: 380 DDKTLLSQVQGHILDLIPMAVKKLNKPQ------------EDNSLTIHACHSVMREVEVL 427 Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA-----------DRYLPYA 438 HD LL++ E D LTP+DI+VMVADID Y+P+IQAVFG RY+P++ Sbjct: 428 HDYLLSLFELDKNLTPKDIVVMVADIDKYAPYIQAVFGQYQKDLQTNQFYQADKRYIPFS 487 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 ISD + +S ++ +F+ LL+L +S+F +E+VLA LD+P + RF I E L +R+WV Sbjct: 488 ISDNKLTESDVLIASFLMLLNLKESQFSAEEVLAYLDIPAIRMRFQIELEDLETIREWVK 547 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 SGIR+G++ L + W+ GL RMLLGYAM + G WQ L +D+S GL Sbjct: 548 NSGIRFGLEKRTDNSL----KNYNAWQSGLERMLLGYAMRAENGIWQDSLGFDDSHGLQG 603 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 +L G LA+ + +L W++ L EEW ++++ FFL + ++ A+ +++ Q Sbjct: 604 KLAGLLAAFIERLYQWQQFLRNPHSYEEWGQALLELVDHFFLENEQSLEAILYLKEIIQQ 663 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + + + + + ++ + +A++L+ + S +FL G V+ CTL+PMR+IPFK VCLL Sbjct: 664 LHEQLDEVNFTSKLEIDVIAEVMAEQLNDKNTSLKFLVGKVSFCTLLPMRAIPFKAVCLL 723 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 GMNDG YPRQ P FDLM ++GDR RRDDDRYLFLEAL++A+ Y+SY+G+SI D Sbjct: 724 GMNDGEYPRQQTPNSFDLMQYHRQKGDRFRRDDDRYLFLEALLAAENYFYVSYVGQSIID 783 Query: 739 NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE 798 N +R PSVLV +L+DY+ ++ +E S L H+ F P N+ Sbjct: 784 NQQREPSVLVSQLLDYLAENLANNDEEIEQIRTS-------LVQYHSMTIFSPDNFSAMH 836 Query: 799 RQSYAREWLPAASQAGKAHSEFVQPLPFTLP--ETVPLETLQRFWAHPVRAFFQMRLQVN 856 R SYA+EWLP ++ +F Q + + + + L +F HPV+ FF+ RL V Sbjct: 837 R-SYAKEWLPLVNRNQYPVPDFTQQISGEIDEVREIDILQLVQFVQHPVKFFFEKRLGVY 895 Query: 857 FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 F+ D +IP+TE F L+ L + I +L+ D+ + F R + G LPYG FG+I+ Sbjct: 896 FQQTDEQIPETENFTLDNLDNFLIKDELI--RFADDETDNYFERLKLEGILPYGHFGDIY 953 Query: 917 WETQCQEMQQL---ADRVIACRQPGQSMEIDLACNG--VQITGWLPQVQPD--GLLRWRP 969 E +L ++ Q +EI L V +TG L + ++WR Sbjct: 954 KRRLQNEAAELKNKISAYLSQEPAHQFVEITLDMGEQSVLLTGHLDHLYQPFAQRVKWRV 1013 Query: 970 SLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYRE 1029 + ++ WL +L+ + N L+ K+G F L AL L ++ Y + Sbjct: 1014 GEVKDKHIIENWLYYLLQLCTTDNVNPPLYYGKNGCIGFKTLEKSTALSILKLYVKAYLQ 1073 Query: 1030 GMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIW 1089 G+ +V +LK+C + + A ++ + E +DI+ Sbjct: 1074 GLKQVQIVPTYKIDDYLKSC-------QPETEFDTLSAFNNLRDLFKSSNNYTNEKEDIY 1126 Query: 1090 YQRLWRQLTPETMEA-----IVEQSQRFLLPLF 1117 + R+++Q T + I + ++ + + Sbjct: 1127 WTRVFQQATELNSDKEKLMQIQQTTRDWFGLML 1159 >UniRef50_B8E565 Exodeoxyribonuclease V, gamma subunit n=8 Tax=Shewanella RepID=B8E565_SHEB2 Length = 1274 Score = 619 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 395/1253 (31%), Positives = 620/1253 (49%), Gaps = 163/1253 (13%) Query: 1 MLRVYHSNRLDVLEALMEFIVERE-RLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML++ SN+++VL A + + + E ILVQS GM+ WL++ ++++ GIAA Sbjct: 1 MLKLIQSNQMEVLCAHLAAYLTQPLAFARLLSNEHILVQSPGMSTWLRLEIAKQNGIAAA 60 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD- 118 ++FPLP+SF W + +LP++PK++AF K +M+WKLM LLP++L+ + F LRHYL + Sbjct: 61 LEFPLPSSFTWQLCHDLLPDVPKDNAFTKAAMTWKLMQLLPRMLQDDAFGPLRHYLGNTL 120 Query: 119 ---------------------SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVE- 156 +D KL+QL + AD+FDQYLVYRPDW+ WE E Sbjct: 121 DNRSTTNSADTSEHLNTSDMTADDIKLYQLCGRIADIFDQYLVYRPDWILAWEQNEHPES 180 Query: 157 ---GLGEAQAWQAPLWKALVEYT-HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVF 212 L E Q WQ LW+AL+ + +L Q +HRANL+ I L + T LP R+F Sbjct: 181 LTKPLNEDQRWQPILWRALIAFNRDELNQSHYHRANLHSDLIAALNNPDTSLAQLPQRLF 240 Query: 213 ICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDR 272 + GIS++ P L+ L L I++ +L +PC++YWGDI DP A++ + Sbjct: 241 VFGISSMAPQTLEVLYHLAGRIDVIVLGLSPCQHYWGDIVDPRNRARMAVQYAGKRQLA- 299 Query: 273 ELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ-----ELDAFV 327 + + +VGNPLLA+ GK+GR+ + +L +L + ++ Sbjct: 300 --------------ELWEDKLEVGNPLLANNGKMGRELLDMLLELPAEHCDFGDDVYCEP 345 Query: 328 DVTPD------NLLHNIQSDILELENRAVAGVNIEEFSRS-DNKRPLDPLDSSITFHVCH 380 P+ ++LH +Q DILE++ E ++ +N+R L D SI CH Sbjct: 346 CDDPNDPHSHASMLHGVQYDILEMQTLDRVLGPDAELYQNVENRRLLKRDDQSIRVKSCH 405 Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 SP REVE LHD LL +L LTP+DI+VM+ D+ +Y+P+I AVF + Y+PYAI+ Sbjct: 406 SPLREVETLHDHLLELLSNHADLTPKDIVVMMPDVAAYAPYIDAVFSAKQGLHYIPYAIA 465 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 DR A Q P++ +F++LL + SRF D+L++L+VP + RF + ++ L+ +R+W++E+ Sbjct: 466 DRGAAQESPLINSFLNLLGINQSRFGLTDILSILEVPAILRRFQLDDDELQLIRRWLDEA 525 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 G+RWG D+ + + +PA Q++W FG+ R++LGYA+ +Q L G A+ Sbjct: 526 GVRWGRDEQSRLKQGVPAFEQNSWAFGIKRLILGYALSDDAPLYQDHLIVTGIEGQSAQA 585 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 +G L + + L+ + LA + L ++L+AF+ D + + I A+ Sbjct: 586 LGKLLNFIEVLDETAQILALPQVGALRLAELTELLDAFYDTDEDEREQLQEIRDAIAALE 645 Query: 621 AE-------------------------GLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 E + G ++ + +L+ QRL + R+ QR+L Sbjct: 646 QELLSAGKPLDTSPLAFSLDISPLAPLAQQSISGLSLSIEVLQQWFNQRLTESRVGQRYL 705 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK-PKRGDRSRRDDDRY 714 AG VN CTLMPMRSIPFKVVCLLGMNDGVYPR P+GFDLM+ ++GDRSRR DDRY Sbjct: 706 AGSVNFCTLMPMRSIPFKVVCLLGMNDGVYPRVQHPVGFDLMAHFGARKGDRSRRLDDRY 765 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP--------GDEA 766 LFLEAL+SA+++LYISYIGRS +DNSER S+LV ELI+Y + Sbjct: 766 LFLEALLSAREQLYISYIGRSERDNSERIASMLVSELIEYCQLCYLPETLLAQSQKASSP 825 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPGER----------------------QSYAR 804 ++ +++E + + PFDP+ YQ + QSY++ Sbjct: 826 IDPEDAEKALYNAIVSHQPLQPFDPKLYQAAVKSDDENSSNIDGSSISQHKSGIGQSYSQ 885 Query: 805 EWLPAASQAGKAH-------------------------SEFVQPLPFTLPETVPLETLQR 839 +W P + A H ++ + V + L R Sbjct: 886 QWCPPNADAAGTHAGRFIGAQTRIMLEADEQDSMPDTEAQPASVREQQQSKQVDVSALIR 945 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE---R 896 F+ +P + FF L+V+ + EPF L L RY + QLL+ + Q E Sbjct: 946 FFRNPAQYFFNRTLKVDLSLNIQADDNDEPFSLNALERYMLQAQLLDDAIGQGLTEPDIE 1005 Query: 897 LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC--------- 947 L +R +A+G LP F ++ +++ L R + + S D+ Sbjct: 1006 LIKRLKASGSLPMQPFDDLLLRQYQHDIKPLIGRTLFLKGEQTSSHADIKLVFDLPITAG 1065 Query: 948 --NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGE 1005 V + G + + P GL+ +RP ++L+L HL A G S L Sbjct: 1066 KSQQVLLQGRIDDISPKGLVNYRPGSAHGRDVLRLYLRHLCLMAMGHTHASYLLDMGH-F 1124 Query: 1006 WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQ 1065 P+ AE+A L+ L+ + +G PL +P + A++ + Sbjct: 1125 HAIAPITAERAHALLADLLVLFYQGQQYPLCFMPRTSLAYVSC------------EGEHD 1172 Query: 1066 KARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 + + L + GEG++ YQRL+ + ++ ++R P+ Sbjct: 1173 ERLQQALPEWLDEQSQLGEGNEPHYQRLFSFPRDFSEDSFGALAERIYRPMVS 1225 >UniRef50_A8ZX08 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZX08_DESOH Length = 1085 Score = 618 bits (1592), Expect = e-175, Method: Composition-based stats. Identities = 359/1135 (31%), Positives = 544/1135 (47%), Gaps = 73/1135 (6%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 + + SNR+++L + LD+PF E I+VQS GM +WL M +++ GI A+ Sbjct: 1 MYFFTSNRMEMLSRAFCEALTAYPLDNPFARETIVVQSMGMKRWLSMEMARHTGICAHNR 60 Query: 62 FPLPASFIWDMFVRVLPEIPKESA-FNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 F P +F+ M + S ++M+W + +L + + L+ YL D D Sbjct: 61 FLFPNAFLNQMLQTAFADAVPVSPDVGVEAMTWAVFPVLADVFAHPALSPLQAYLQD-GD 119 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 K +QL+++ AD FDQYLV+RPD L QWE G L + WQA LW+ L+ Sbjct: 120 VIKRYQLAARIADTFDQYLVFRPDMLLQWEAGALPA--DPHEKWQAHLWRLLISQGW--- 174 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 RA +++F+ +S LPSRV + GIS LP ++Q AL +E+ Sbjct: 175 --AEQRAERWKQFLSLAQSGALAGSTLPSRVSVFGISTLPRFHVQVFAALSAFLEVRFFV 232 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NPCR+YWGDI E +A + + + GN LL Sbjct: 233 LNPCRHYWGDILS-----------------TYEKKQVETGADARDIPEAARHLETGNSLL 275 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 AS G + RD+ ++ D QE F +L +Q+DIL+L++ A Sbjct: 276 ASMGMVARDFFAMVEDH-PHQETSLFAPAGETTMLACLQNDILDLKDAA----------- 323 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + +D D+S+ VCHSP REVE LHD LLAM E D L+P D++VM +++ Y+P Sbjct: 324 DQERVRVDGNDASMQISVCHSPMREVEALHDNLLAMFEADAGLSPEDVLVMAPNMEVYAP 383 Query: 421 FIQAVFGSAPADRY--LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 +++AVF + D +PY ++DRR++ PV+ F+ L+ L +SRF VL +L+ Sbjct: 384 YVEAVFDAGADDGGQRVPYTVTDRRSKSGSPVVRTFLGLMDLWESRFGISAVLEILESAF 443 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 + RFDI E + QW+ ++G+RWG+D + +LP ++TW+ G+ ++LG AM Sbjct: 444 VRERFDIGEAEFFRISQWLVDAGVRWGLDGAFKTDRDLPEFSENTWKQGIDSLVLGCAMA 503 Query: 539 -SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + + +LPYD G + + + L + R W + ++ + Sbjct: 504 GKGEILFDGLLPYDHMEGSDVDSLEKFLAFWHVLLRFYRQCGGAHAPGRWRQILTALVES 563 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 F D EA + +I A+ A + V L ++R+ L +R + + F++G Sbjct: 564 MFAADPAVEADLQVITDALNALGESAAHAGFDGPVDLPVIREFLNRRFEGQAYGAPFISG 623 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V C+++PMRSIPF V+CLLGMN YPRQ GFD++ + P+ GDRS+R+DDRYLFL Sbjct: 624 GVTFCSMLPMRSIPFAVICLLGMNVDDYPRQTFSPGFDMIRKHPRPGDRSKRNDDRYLFL 683 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 E L+SA+++LYISY+G ++DNS+R PSVLV EL DY+ + V Sbjct: 684 ETLLSARRRLYISYVGHDMRDNSDRPPSVLVGELCDYLRERFDAG---------PLTDVV 734 Query: 778 AHLTCLHTRMPFDPQNYQPG--ERQSYAREWLPAASQAGKAHS-------EFVQPLPFTL 828 +T H PF P + R SYA ++L AA Q V Sbjct: 735 EKITTHHRLQPFHPDYFSSDTQARFSYAADYLAAARQLAGGRPGRPAALEPAVPVPDNAD 794 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 P+T+ +E L RF+AHP R F RL + D + EPF + GL RY + ++L+ L Sbjct: 795 PQTIEVEDLCRFFAHPARYFLTQRLGLRVAETDRIPEEAEPFEVAGLERYDMARRLVERL 854 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ--PGQSMEIDLA 946 + +D A L RA+G LP+G G+ +E V A EI L Sbjct: 855 LAEDPAAPLENALRASGILPHGEPGKRLFERLKTGAAGFVAGVRAVTANGGLDRREIRLD 914 Query: 947 CNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEW 1006 NG + G L + R+R + + W+ HL + G S F +DG W Sbjct: 915 INGTTLCGTLDGIGEQEWFRFRYATARPGDFITNWIAHLAWSVDQGRAGSGRFAARDGWW 974 Query: 1007 RFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQK 1066 F P+ + L L+ LIE YR+G PL P S + +T N +M Sbjct: 975 AFDPV--DNGLSILAALIEIYRQGRLRPLHFFPRSAFVYAETLQKKGNASM--------- 1023 Query: 1067 ARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 A + LQA+ GN V GE +D +Y + + S + PL + Sbjct: 1024 ALDRALQAWRGNERVAGEKEDPFYALWFAG-DDPLDDEFETLSTAVVTPLLACRR 1077 >UniRef50_Q12LP5 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Bacteria RepID=Q12LP5_SHEDO Length = 1375 Score = 611 bits (1574), Expect = e-173, Method: Composition-based stats. Identities = 395/1324 (29%), Positives = 605/1324 (45%), Gaps = 234/1324 (17%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLD-DPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML + SN+++VL + ++ + + E +LVQS GM+ WL++ +++ GIAA Sbjct: 1 MLTLIQSNQMEVLSEQLAKLLATPLDETNLLASEHVLVQSPGMSTWLRLEVARHNGIAAA 60 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYL---- 115 ++FPLP+SFIW + +LP++PK++AF K +M+WKLM LLP+LL+ DF L +YL Sbjct: 61 LEFPLPSSFIWQLCHTLLPDVPKDNAFTKPAMTWKLMDLLPRLLDDADFAPLANYLTTEL 120 Query: 116 ----------------------------------TDDSDKRKLFQLSSKAADLFDQYLVY 141 + D K +QL S+ AD+FDQYLVY Sbjct: 121 ATELAPELAPELATEIKPDQAAAAPDSRSQAIVLSAAQDAIKRYQLCSRIADIFDQYLVY 180 Query: 142 RPDWLAQWETGHLVEGLGEAQA------WQAPLWKALVEYT-HQLGQPRWHRANLYQRFI 194 RP+W+ WE + L WQ LW+AL++Y +LG +HRANL++ + Sbjct: 181 RPEWILAWEQNKPLTSLDNKLKLDDSQLWQPKLWRALIDYNRDELGASPYHRANLHESLL 240 Query: 195 ETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDP 254 E L + LP R+F+ GIS++PP L+ L L I + +L +PC +YWGDI DP Sbjct: 241 EALADEQSSVANLPQRLFVFGISSMPPQTLEILHQLAGRIPVVMLALSPCEHYWGDIIDP 300 Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLL 314 A++ + + + +VGNPLLA+ GKLGR+ + L+ Sbjct: 301 KTRARMALQYADKKQLA---------------QDWESSLEVGNPLLANNGKLGRELLDLM 345 Query: 315 SDLESSQ------------ELDAFVDVTPDN----------LLHNIQSDILELENRAVAG 352 L S +++ D D LLH +Q DIL++E V+ Sbjct: 346 LALPSEHTDFGYDCYVKPWDINLHSDDENDAVPVNTPQNAKLLHGVQYDILQMETLGVSL 405 Query: 353 VNIEEFSRSDN-KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + +R L P D SIT CHSP REVE LH+ LLAML P L P+DI+VM Sbjct: 406 GPDAALYNNIPNRRLLQPDDDSITIRTCHSPLREVETLHNHLLAMLSRCPQLHPKDIVVM 465 Query: 412 VADIDSYSPFIQAVFGSAPADRY------------LPYAISDRRARQSHPVLEAFISLLS 459 + D+ +Y+P+I AVFG+A A+ +PYAI+DR A P++ +F+SLL+ Sbjct: 466 MPDVAAYAPYIDAVFGTANAEASGIDGARQQGNSYIPYAIADRGAAAESPLINSFLSLLN 525 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + SRF +++ +L+VP + RF ++ + L +R W++E+ +RWG D+ + L LPA Sbjct: 526 INQSRFALTEIMGILEVPAILRRFKLSGDELSQIRLWLDEANVRWGRDEHSRAALNLPAF 585 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 Q++W FG+ R++LGYA +Q L G A+ +G L + L L+ +R A Sbjct: 586 EQNSWAFGIRRLILGYAFHDGAPLYQDTLLVPGLEGQSAQALGKLMNFLETLDDYRALFA 645 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 L + +L F D + + I + + E GA + + + +L+ Sbjct: 646 APCTTSSRLFELQTLLQDIFEADDDEREEIQAINEAIAKLSEELNGAGHQGMLDIEVLKI 705 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 QRL + R+ QR+LAG VN CTLMPMRSIPF +VCLLGMNDG YPR P+GFDLM+ Sbjct: 706 WFNQRLSESRVGQRYLAGSVNFCTLMPMRSIPFNMVCLLGMNDGDYPRVQHPVGFDLMAH 765 Query: 700 K-PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 K+GDRSRR DDRYLFLEAL+SA+++LYISYIG+S +DNSER PS+LV ELI+Y Sbjct: 766 FGAKKGDRSRRADDRYLFLEALLSAREQLYISYIGQSERDNSERIPSMLVSELIEYCQLC 825 Query: 759 HYLPGDEA-----------LNCDESEARVKAHLTCLHTRMPFDPQNYQPGE------RQS 801 + P + + + A L PFDP+ ++ + +QS Sbjct: 826 YLTPEMKEQLSKLDEEQILALSKPCDDALLARLIQAQPLQPFDPKLFRDNQALGIALQQS 885 Query: 802 YAREWLPAASQAGKAH-------------------------------------------- 817 Y +W P ++ A K Sbjct: 886 YHSQWCPPSTPANKTTTAPASAAASGSASAETSVNTWVMNSSGRFLGPNQSLPQSILADS 945 Query: 818 -------SEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 + + + L L RF+ +P + FF L+V+ + + EPF Sbjct: 946 LWPQWHSDLEERAVFAATDAELELSALLRFFRNPSQFFFNRSLKVDLSLDIQADDNDEPF 1005 Query: 871 ILEGLSRYQINQQLLNALVEQD----------------DAERLFRRFRAAGDLPYGAFGE 914 L L RY + +LL+ ++ D L + +AAG LP F E Sbjct: 1006 SLNALERYLLQAKLLDKILAPDLDTSDLDNNGDDRKKTPEASLTQALKAAGSLPMAPFDE 1065 Query: 915 IFWETQCQEMQQLADRVIACRQPGQS-----MEIDLACNG-------------------- 949 + ++M L RV R +E++ + + Sbjct: 1066 LLLSQYQRDMAPLIGRVQFMRGEQCEPRSLNLELEFSFSPGQILANSLELSEISLEPALI 1125 Query: 950 ---------------VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNG 994 + + G + + P GL+ +RP ++++L HL ASG Sbjct: 1126 NSPELAHNAAQAPLKLTLLGRIDDILPKGLINYRPGAAHGRDLVRVYLRHLCLNASGQQ- 1184 Query: 995 ESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQN 1054 ++ L F P+ A L I Y +G + PL +P + A+++ Sbjct: 1185 QTSYLLDMAQFHSFAPITPAHATAQLKAFILAYIQGQTRPLCFMPRTAFAYVEAP----- 1239 Query: 1055 DAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLL 1114 + Q+ + + GEG + RL+R T + L Sbjct: 1240 -------GSHQEKLIAAQKLWRDEQNQLGEGFEPHNHRLFRFPDDFTESGFGAIATTLLS 1292 Query: 1115 PLFR 1118 P+ Sbjct: 1293 PMLS 1296 >UniRef50_C0N788 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N788_9GAMM Length = 1069 Score = 610 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 369/1137 (32%), Positives = 575/1137 (50%), Gaps = 88/1137 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML++ +SN L A + + E L P +PE I+VQS +++WL + L++ IAAN+ Sbjct: 1 MLKIVYSNDTGQLAAWLADHLLSEPL-PPLQPETIIVQSNELSRWLSLRLAKTHQIAANL 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +FP P+++IW +F ++ P++P +S + K+ M+W+L LLPQ + F + YL D D Sbjct: 60 EFPFPSAYIWQLFRQLWPDVPLQSPYAKEPMAWRLFELLPQAASLDGFEAVAAYLGGDDD 119 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 K ++L+ K AD FDQYL+YRPDW+ QWE G +WQ LW+ L Sbjct: 120 DLKRYELAEKIADTFDQYLMYRPDWVQQWEQGQAT-------SWQGKLWQMLTAD----D 168 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 HRA L Q+ + L + PPGLP+R+ I GISALPPVYL+ + L ++++I L + Sbjct: 169 PQPMHRARLLQQLHDLLSHSDVVPPGLPNRISIFGISALPPVYLEIVNLLARYVDITLYY 228 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 +P +YWGDI DP + L ++ E + G+PLL Sbjct: 229 LSPSEHYWGDIIDPKKQQRQQL----------------------LLDFNEDEIEPGHPLL 266 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 AS GK G+ + L + + FV+ + +L ++ DI E+ + Sbjct: 267 ASLGKQGQAFFRQLQE-TQHLDDSCFVEPVGETMLSQLKRDIFEMATDQPSVAV------ 319 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 D+SI+ VCHSP RE+E+LHD+LLAM E++PTLTP DI+VM DID Y+P Sbjct: 320 --------KDDTSISIQVCHSPMREMEILHDQLLAMFEQNPTLTPTDIVVMTPDIDVYAP 371 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +I+AVF +A R++P++I+D +Q ++ F S L LP SRF E +LA+L+ P + Sbjct: 372 WIEAVFATADKSRFIPFSIADSSGQQESLLITTFYSFLQLPQSRFDVESILAMLECPAVQ 431 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 RF + + L ++R+W ++ RWG+D ++ L+LP T +TWR GL R+LLGYAM Sbjct: 432 RRFGLDDAALNWIREWCQQTRTRWGLDANDKAALDLPDTESNTWRAGLDRLLLGYAMPLN 491 Query: 541 Q-----GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 + + L D SG A +V L + L+ WR+ LA++ + +W L Sbjct: 492 EPDQPWRLFDGQLAMDGISGERAHIVAALCDFIDALDAWRQRLARQNTIADWQKQLNQCL 551 Query: 596 NAFFLPDAETEAAMTL----IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 +AFF + E I Q + + + A + + L+ L L + Sbjct: 552 DAFFNTEGLEETQFETEITAIRTQLERLSSGAKQADFEQTIGADLILSWLQSHLQPVDNA 611 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 RFL + C ++PMRSIPF VVCL+GMND V+PR+ + FDL++ + GDRSRRDD Sbjct: 612 HRFLGHGITFCGMVPMRSIPFDVVCLVGMNDEVFPRRQPSVSFDLLAHDHREGDRSRRDD 671 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 DRYLFLEAL+SAQQ Y+SY+G S+ DNSE PSVLV +L D + + E Sbjct: 672 DRYLFLEALLSAQQTFYMSYVGASVVDNSEIPPSVLVSDLQDLLAERFET---------E 722 Query: 772 SEARVKAHLTCLHTRMPFDPQNYQ--PGERQSYAREWLPAASQAGKAHSEF-VQPLPFTL 828 + A + + H F + + + S+ P +A+ P Sbjct: 723 TTATILEQIITKHPLQAFSRRYFDGNNDQLFSFNASHCPTQEMLEQANWFETPLPEADDS 782 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 V + L RF+AHP + + RL + ++ + EPF L+GL +Q+ Q +++ Sbjct: 783 WRQVTRDQLIRFFAHPTKFILRERLGIRLELDEEALESREPFALDGLESWQLRQWIVDES 842 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP--GQSMEIDLA 946 + Q E L +A G LP G G+ ++E + Q + +++ ++ IDL Sbjct: 843 LSQHSDEGLKPVVQATGMLPQGRLGDAWFEKESQTVDDFIEKLRPVLPEQGWITLAIDLN 902 Query: 947 CNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCAS--GGNGESRLFLRKDG 1004 +G QI G LPQ GLLR+R + + W++HL+ G + +D Sbjct: 903 IDGFQINGQLPQFSQQGLLRYRLAKKKGKDLIAAWIDHLILNILKPEGVTLQTHLILQDA 962 Query: 1005 EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTL 1064 E+ F P+ L+ L++ Y +G PL ++ A+ T + + Sbjct: 963 EYVFLPVTGP--TQILANLLKLYWQGCHLPLKFFDQASLAFAATYFGKKP---------- 1010 Query: 1065 QKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 ++ K + + GEGDD +Y+RL+ Q P + E + + PL + Q Sbjct: 1011 EQKFKKAHDKWSASGDFAGEGDDNYYRRLYSQ--PPLDDEFAELAIQVYEPLQQHLQ 1065 >UniRef50_P44945 Exodeoxyribonuclease V gamma chain n=21 Tax=Haemophilus influenzae RepID=EX5C_HAEIN Length = 1121 Score = 607 bits (1564), Expect = e-172, Method: Composition-based stats. Identities = 392/1170 (33%), Positives = 613/1170 (52%), Gaps = 102/1170 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M VY+SN+L+ + ++ + + +DPF+ ++ILVQS MAQWLQ+ L+++ GI+AN+ Sbjct: 1 MFIVYYSNQLEKQKEILSSLFKSLPPEDPFQQDIILVQSPNMAQWLQIELAKETGISANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLT--DD 118 FP+PASFIW ++ + LP E+ F+K SM W+LM L+P LE+E+F+ LR+YL+ Sbjct: 61 KFPMPASFIWQLYAQNLPATALENPFDKDSMMWRLMRLIPIFLEKENFSPLRNYLSSSPH 120 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA--------------- 163 S++ KL+QLSSK ADLFDQYLVYRP+W+ WE G + + Q Sbjct: 121 SEQYKLYQLSSKIADLFDQYLVYRPEWIFAWEKGEDEQITDQIQKQQPNLNATLFAQIQG 180 Query: 164 ---WQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 WQ LW+ALV HRA L+ +F+ L P LPSR+FI GI ALP Sbjct: 181 NTKWQGELWRALVVDVKSDVNEATHRAALHNQFLALLADKK-APKKLPSRIFIFGIPALP 239 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPA-YLAKLLTRQRRHSFEDRELPLFRD 279 YL LQA+ ++IHL F NPC+ YWGDI D + R + + ++ + D Sbjct: 240 TAYLNILQAISSEVDIHLFFNNPCQEYWGDISDLRLDYLRSRQRYQFNKQDENQPLFSED 299 Query: 280 SENAGQLFNSD-----GEQDVGNPLLASWGKLGRDYIYLLSDLESS---QELDAFVDVTP 331 + + D +GNPLLA+WGK+GRD++Y+L E ++A+ ++ Sbjct: 300 QLSQLENAQFDVTYQKENLQLGNPLLAAWGKMGRDFLYILVRDEEHIPTYPVNAYQEIES 359 Query: 332 DNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHD 391 ++LL +QS IL LEN + D ++T H CHS REVEVLHD Sbjct: 360 NSLLGQLQSQILHLEN---------------KPLNIAKNDRTLTLHSCHSAMREVEVLHD 404 Query: 392 RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD-RYLPYAISDRRARQSHPV 450 LL + +DP+LTP+D++VMVADI+ Y+P+IQAVFG D +P+++SD + +S + Sbjct: 405 YLLDLFNQDPSLTPKDVVVMVADINQYTPYIQAVFGQKNGDVPQIPFSLSDNKLSESDVL 464 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 + ++++LL L +S F +EDVL LLD+P + RF+I+ L +R+WV +SGIR+G+ Sbjct: 465 VSSYLTLLRLKESNFSAEDVLVLLDIPAMRERFNISLADLPLVREWVTDSGIRFGL---- 520 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 + ++W+ GL RM+LGYAM QG WQ L + S GL EL G+L+ Sbjct: 521 --QKNQDGINFNSWQAGLERMILGYAMREEQGIWQDSLGLNSSYGLKGELAGNLSHFFTA 578 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 L+ L Q +E+W + +L+ FF+ + +T + I+++ + + + Sbjct: 579 LSALHETLQQAHSIEKWQEILTALLSDFFVRNEDTSDMIFYIQEKINELAEHLKTLHFNE 638 Query: 631 AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 + ++ D + +L+ S +FLAG VN CTL+PMRS+PFKVVCLLGMND YPR Sbjct: 639 ELQAEVIADVITMQLEDAPNSLKFLAGKVNFCTLLPMRSVPFKVVCLLGMNDADYPRTQT 698 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 P FDLM ++GDR RRDDDRYLFLEAL++A+ YISY+GRSI DN + PSVLV + Sbjct: 699 PNSFDLMQYHYQKGDRVRRDDDRYLFLEALLAARDYCYISYVGRSITDNQPKEPSVLVSQ 758 Query: 751 LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 L+DYI Q H F P N++ E+ + + Sbjct: 759 LLDYINQGQKENVLT---------------VIEHPMTAFSPDNFKNNEKFTRSFATKWLP 803 Query: 811 SQAGKAHSEFVQPLPFTLP-----ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 A S + E V L+ L F +PV+ FF+ +L V FR +D I Sbjct: 804 IAQFDASSNNSEFAVTMTENLEKIEEVELDALVSFVENPVKFFFEKQLGVYFRDKDERIA 863 Query: 866 DTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 D+E F L GL Y +N L+ +++ + FR+ G LP FG+++ E + Sbjct: 864 DSENFTLSGLDNYSLNNDLI--YLDEQNFADYFRQAEVKGVLPRAEFGKVYAENIRDNVL 921 Query: 926 QLADRVIACRQPGQS-MEIDLACN------GVQITGWLPQVQPD--GLLRWRPSLLSVAQ 976 + ++ + + ++ +L+ + +++ G++ + D ++ W + Sbjct: 922 EFKKKIADLGEAKHASVDFNLSVDWQNENQKIRLFGYMDALFGDDSQVIHWHFAKYKDRY 981 Query: 977 GMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLL 1036 ++ W+ +L+ C + N + +D PP+ E AL L ++ Y + L Sbjct: 982 CIRPWIYYLIQCVTQENAVPAKLITQDKVLELPPIEREVALAQLQIYVKDYLQSQIEIQL 1041 Query: 1037 VLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ 1096 V T + + + D++S +K + E N G D ++ R+ Q Sbjct: 1042 VP---------TVRNISDFIVSDENSVSEK----LQELTESNGF--GPKADPYWSRVLAQ 1086 Query: 1097 LT----PETMEAIVEQSQRFLLPLFRFNQS 1122 + PE + +++Q++ + LF ++ Sbjct: 1087 TSRFKQPENIAKLLKQTKAWFGLLFAQKKT 1116 >UniRef50_Q3B473 DNA helicase/exodeoxyribonuclease V, gamma subunit n=1 Tax=Chlorobium luteolum DSM 273 RepID=Q3B473_PELLD Length = 1075 Score = 600 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 371/1139 (32%), Positives = 571/1139 (50%), Gaps = 86/1139 (7%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 ++ SNR +VL A + PF E+++VQS GM +WL M L+++ G+ A Sbjct: 3 FNIHTSNRTEVLAADLASYFAASPPASPFSREVVVVQSRGMQRWLSMELARRLGVWAGAR 62 Query: 62 FPLPASFIWDMFVRVLPEIPKES-AFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +P P + + ++F V P E+ ++ + +W +M LLP +L E F +L YL+ S Sbjct: 63 YPFPNAVVSELFRHVFPSKEDEAGRYDPECTTWSIMRLLPSMLRDEPFAILSRYLSGSSA 122 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 +L+QL++K AD FDQY ++RP+ LA WE G G WQ+ LW+ L Sbjct: 123 PLRLYQLATKIADSFDQYTLFRPEMLALWEAGEGTAGPD---GWQSILWRRLNAELGG-- 177 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 HR L + F + T P R+ + GIS LP +L L A+ +H E++L Sbjct: 178 ---RHRGILKEAFC---RNGTLPDAVFPRRIALFGISYLPQFHLDILSAIARHREVNLFV 231 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 +P YWGDI L+ + GNPLL Sbjct: 232 LSPTEEYWGDIVSRRTLSGMTH-------------------------AERELHAEGNPLL 266 Query: 301 ASWGKLGRDYIYLLSDLESSQE--LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 AS G++GRD+ ++ ++ Q ++ ++D D LLH IQSDIL L Sbjct: 267 ASLGRIGRDFSDMVLEIPDEQNRTVERYIDPRRDTLLHAIQSDILTL-----------SG 315 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 + + D S+ H CHSPQREVEVLHDR+L MLE P L PRDI+VM DI++Y Sbjct: 316 TGEGERPVCSATDRSVQVHACHSPQREVEVLHDRMLDMLESIPGLAPRDIVVMAPDIETY 375 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 SPFI AVFGSA A+ +P++++DRR V A + LL L SR + ++ LL P Sbjct: 376 SPFITAVFGSA-AEGRIPFSVADRRLMNEGEVSSAVLRLLELHRSRASAPELFDLLSSPP 434 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 +A RF + L+ +R W+ ++ IRWGID++ +LPA Q+TWR G+ R+LLGYAM+ Sbjct: 435 VARRFGLDVSALQSIRGWIVDTRIRWGIDEEERSMNQLPAFRQNTWRAGIDRLLLGYAMD 494 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 S + + +LP++ G AE +G A + ++ +R GL++ R LEEW ML F Sbjct: 495 SRESCCEGILPFEGVDGGAAETIGLFADFIDAVDRFRHGLSKTRTLEEWRVFFISMLEHF 554 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 L + ++ ++ + + + Y D VP ++ L RL Q+ F+ G Sbjct: 555 MLTEEDSTREFLAVQDLMERMGEISRLSAYHDEVPPEVVIAWLQGRLQQKEQGLGFMTGG 614 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 V C+++PMRS+PF+VV +LGM+DG +PRQ P GFDL+S+ PKR DRS R +DRYLFLE Sbjct: 615 VTFCSMLPMRSVPFRVVVMLGMDDGAFPRQQHPPGFDLISRHPKRADRSVRAEDRYLFLE 674 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 ++SA+ LYIS++GRS +D+S PSVLV EL D I + LP R + Sbjct: 675 TILSARDVLYISFVGRSRKDSSPIPPSVLVSELFDAIDRGFLLPE---------GVRAEE 725 Query: 779 HLTCLHTRMPFDPQNY-QPGERQSYAREWLPAASQAGKAHSEF-----VQPLPFTLPETV 832 L H PF P + G SY+ E ++ A E P P + V Sbjct: 726 MLLFSHPLQPFSPACFSAGGPLFSYSEENFLPHAEHSGAGPEPLFMDSPLPEPGEPLQRV 785 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD 892 L L F+ +P F + RL + + + + EPF L+GL Y+I +L A++ + Sbjct: 786 ELMDLIGFYDNPSAFFLRYRLGLQPAGQVLPLDEREPFGLDGLDAYRIRAELAEAMLLEG 845 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL---ADRVIACRQPGQSMEIDLACNG 949 D R+ RFRA G LP G+ +++ ++ + R+ P +++ +L Sbjct: 846 DIGRVQDRFRAEGVLPPALSGDRLYQSLLEDAARFVRSVQRLAPISLPLPALDFELPLGP 905 Query: 950 VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGE--SRLFLRKDGEWR 1007 + ++G L ++ G L RP+ + + M+ W+ HLV C+ G L + +G +R Sbjct: 906 MILSGRLEGLRSSGQLFARPASMKARERMRSWIFHLVLCSLRPEGVDPETLLIMNNGAYR 965 Query: 1008 FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKA 1067 E L +L+E YR G PL PE+ +W + + L+ A Sbjct: 966 LR--QPEAPGLLLQELLERYRSGQRMPLAYFPETSFSW-------EGKLEKGEGDALKAA 1016 Query: 1068 RTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEA----IVEQSQRFLLPLFRFNQS 1122 R + + G RGEGDD ++R + + ++ A E + + P+ + +++ Sbjct: 1017 RGAWRTSGFGG--ARGEGDDPAFRRCFGEAGFDSEAAGPLYFRELAAALVRPVLQHSEA 1073 >UniRef50_Q9CM76 RecC n=1 Tax=Pasteurella multocida RepID=Q9CM76_PASMU Length = 1124 Score = 598 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 431/1166 (36%), Positives = 639/1166 (54%), Gaps = 88/1166 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +Y+SN LDV + ++ + ++ LDDPF+ ++ILVQS GMAQWLQ ++++ GI++NI Sbjct: 1 MFTIYYSNDLDVQKNILL-TLMQDTLDDPFQSDVILVQSPGMAQWLQWKIAEQQGISSNI 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLT--DD 118 FP+PASFIW +V LP ++S FNK SM+W+LM L+P+ LE+ +F LRHYL+ Sbjct: 60 KFPMPASFIWQQYVDNLPNTEEQSQFNKASMTWRLMRLIPEHLEQVEFQSLRHYLSSSHQ 119 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA--------------- 163 ++++KL+QL+ + ADLFDQYLVYRP+W+A WE G + + + Sbjct: 120 TEQQKLYQLAYQIADLFDQYLVYRPEWIACWERGDEATMMAQLERKLKDTRLPIGNAFSQ 179 Query: 164 ---WQAPLWKALVEYT--HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA 218 WQA LW+ALV HRA L +F++ L++ P LP R+FI GISA Sbjct: 180 DVKWQAILWRALVADILAESGQTVPLHRAYLQTQFLQFLQT--QHPVNLPPRLFIFGISA 237 Query: 219 LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFR 278 LP YL+ A+ ++ E+HL FTN CR YWGD+ DP ++ +L QR +P+F Sbjct: 238 LPKGYLEIFYAMSQYCEVHLFFTNGCREYWGDLIDPRFMQRLSQMQRTGYHTALPIPVFH 297 Query: 279 DSEN-AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLL---SDLESSQELDAFVDVTPDNL 334 ++N + G+PLL+SWGKLGRD++YLL LE + +DA+ ++T +L Sbjct: 298 HTDNARFESSYDHEHLFEGHPLLSSWGKLGRDFLYLLTELEQLEGVRSIDAYTELTSQHL 357 Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 L +Q+ IL LE L D S+TFH CHSP REVEVLHD LL Sbjct: 358 LSQVQARILHLE--------------GKQGLNLAENDRSLTFHSCHSPMREVEVLHDYLL 403 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP--ADRYLPYAISDRRARQSHPVLE 452 + ++D TLTP+DI+VMVADID Y+P+IQAVFG A R +P++ISD R ++ ++ Sbjct: 404 HLFQQDSTLTPKDIVVMVADIDKYTPYIQAVFGQYNQVAQRQIPFSISDNRLSENDVLIA 463 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 +FI LL+L +S+F +ED+LALLD+P + RF I L +R WV +GIR+G++ + Sbjct: 464 SFIHLLALKESQFSAEDILALLDIPAIRNRFQIELMELEQIRHWVAHAGIRFGVEKEQ-- 521 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 ++W+ GL RMLLGYAM G WQ L +D GL +L G LA + +L+ Sbjct: 522 --GKQEKNTNSWQAGLERMLLGYAMREENGIWQGNLGFDPCYGLQGQLAGRLAEFIARLS 579 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 W + L +P+E+W +L FF D + I++ ++ + + + Sbjct: 580 AWYQFLQTPQPIEKWQQHLLTLLTDFFAEDETNITTLRYIQETIVQMVTDIQQTHFDQPL 639 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 ++ D L+ L+ + S +FLAG VN CTL+PMRSIPFKVVCLLGMN+G YPRQ P Sbjct: 640 SSEVVSDVLSALLEDDPNSMKFLAGKVNFCTLLPMRSIPFKVVCLLGMNEGDYPRQQTPN 699 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 FDLM ++ DR RRDDD YLFLEAL+SAQ+ Y+S++GRSI DN + PSVLV +LI Sbjct: 700 SFDLMQYDRRKADRFRRDDDCYLFLEALLSAQEAFYVSFVGRSIVDNQSKPPSVLVSQLI 759 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 DY+ + +A L H F P N++ S+A +WLP A+ Sbjct: 760 DYLVDKLSSAETQ---------DWQARLIEQHPMTAFSPDNFRGEN-GSFANQWLPLANI 809 Query: 813 AGKAHSEFVQPLPF---TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 + ++FVQP+ + L L F HPV FF+ L V+F ++ I D+E Sbjct: 810 QKQERADFVQPIAQTVLAEDREIVLADLIAFIQHPVAFFFKRHLGVSFAKQEERIEDSEN 869 Query: 870 FILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 F L+GL RYQIN+QLL +++ + + + + G LP G F +IF Q +++ L Sbjct: 870 FTLDGLMRYQINEQLL--YCDEEKSAEVLAQLKVKGMLPRGEFAQIFALQQQEDIAALKT 927 Query: 930 RVIACR-QPGQSMEIDLAC----NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 V Q +E+DL +++ G L Q+ + WR + ++ W+ + Sbjct: 928 TVADYLKQEAHVVEVDLTIPSGYGDIRLIGLLDQLYAQRRVMWRVGQIQEKHLIENWVYY 987 Query: 985 LVYCASGGNGESRLFLRKDGEWRFPPLAAEQ-------ALHYLSQLIEGYREGMSAPLLV 1037 L+ CA E ++ K+G+ F L A + AL L +E Y +G +V Sbjct: 988 LIQCAMLAQHEPPIYYGKNGQATFQALCASESLSVKEIALAQLQIYVESYLQGYQQMQMV 1047 Query: 1038 LPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ- 1096 ++ +L+ + + RT EG+ G DI++QR+ Q Sbjct: 1048 PMKNIQRYLEAY-------GHTETPDFEMIRTLLHHLAEGDYASDG---DIYWQRVLAQQ 1097 Query: 1097 -LTPETMEAIVEQSQRFLLPLFRFNQ 1121 L E + AI E++ + +F + Sbjct: 1098 VLDEERLNAIGERTTSWFKLMFEQLE 1123 >UniRef50_Q7NQR0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Chromobacterium group RepID=Q7NQR0_CHRVO Length = 1065 Score = 596 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 378/1131 (33%), Positives = 564/1131 (49%), Gaps = 80/1131 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +Y SNRL+ L L + + L DPF E ++VQS GM +W+ + +++K GIAANI Sbjct: 1 MLFLYQSNRLEQLGELFCGMTQAMPLADPFAAETVIVQSRGMGRWITLDVARKAGIAANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DF LPA+F W + +V+P++P++SAF + ++W+L+ LLP L F + HYL Sbjct: 61 DFALPAAFAWRLMQKVMPDLPRKSAFVPEVLAWRLLALLPSLSGEP-FGPVLHYLEGG-- 117 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + F+L+ K AD+FDQYLV+RPDW+ WE G L+ GLGE +AWQA LW+ L E Sbjct: 118 EAAAFELAGKIADIFDQYLVFRPDWIRAWEAGELL-GLGEDEAWQASLWRRLAE-----S 171 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 P HR + +F L+ P LP RV + GI++L P+YL ++ L + ++ L Sbjct: 172 DPGRHRVRMLDQFFADLK-----PEHLPPRVTLFGIASLAPMYLALVKRLSQLTDVCLFT 226 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NPC YWGDI D L KL D G+PLL Sbjct: 227 LNPCEAYWGDIVDARRLLKLR-------------------------QAGDLFATQGHPLL 261 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 +S GK GRD+ L+++ F D LL +Q DIL+L Sbjct: 262 SSLGKQGRDFFELIAEDAELDAKPLFAAPKGDGLLARLQRDILQL------------NDP 309 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 S RP DP D+SI H CH P RE+E L DRLLAM DP L+P D+ V+ DI++Y+P Sbjct: 310 SQLPRPFDPADASIEVHACHGPMRELEALKDRLLAMFAADPKLSPADVAVLTPDINAYAP 369 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +I AVFG +PY+I+DRR + P+L F ++L L DSRF +++VLAL D P L Sbjct: 370 YIDAVFGRRDDAPNIPYSIADRRVEREQPLLSTFAAVLKLADSRFAADEVLALFDCPALL 429 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME-- 538 ARFD+ + L +++ WV ++GIRWG D + L LPA +TWR+GL R+LLG + Sbjct: 430 ARFDLADADLAFIQDWVRDAGIRWGRDAAHKASLGLPAEAAYTWRWGLDRLLLGTVLPPA 489 Query: 539 ---SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 G + +LPY + G + E + A L+ +Q ++W Sbjct: 490 LAGDDAGLFAGLLPYTAAQGQLGETLARFAGFYDALDALADAWSQPAAPQQWAQRFHQAC 549 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 + FL + + EAA+ L+ + + A +G V L++ RD L ++L Q FL Sbjct: 550 DRLFLAEGDDEAALELLREALAELAENADLAGFGQPVGLAVARDWLLRKLSSSSA-QGFL 608 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 +G V C ++PMRSIPF+ +CL+GMNDG YPR P+ FDL+++ P+RGDRSRR DDRYL Sbjct: 609 SGGVTFCAMVPMRSIPFQALCLIGMNDGAYPRDERPVSFDLVARNPRRGDRSRRFDDRYL 668 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 FLEA++SA+ +LY+SY+G+S + PS LV EL+D + Sbjct: 669 FLEAILSARGRLYLSYVGQSARSGEPLPPSPLVSELLDTLSAM-------------CGED 715 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP---LPFTLPETV 832 + A LT H PF P+ + G+ + + E AA+ A V Sbjct: 716 MAARLTLRHPLQPFSPKAFDGGDARLASFEPAFAAALAAPPAEPAPFVAPLPDEGAATVV 775 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD 892 L RFW +P RA+ RL + P EPF + + + + +QL+ A++ Sbjct: 776 NLHDFIRFWQNPARAWLADRLALRVAYSGDAQPAREPFAMARDASHALRRQLVEAMLHGK 835 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV--IACRQPGQSMEIDLACNGV 950 + + +R AAG LP G G+ + + + + +LA R+ + + L G Sbjct: 836 PPQPVRQRVAAAGLLPCGELGQAWLQEEGRASVRLAGRLPGALRGEALPPQPVHLEIAGF 895 Query: 951 QITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPP 1010 + G L ++P+G L + ++ AQ + LWL HL+ CAS G + D Sbjct: 896 TLVGELYGLRPEGRLDFIVGKMNAAQRVALWLSHLILCASRPAGIAPHSACYDDAGSTLL 955 Query: 1011 LAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTK 1070 A L + +++G + PL + A+ + + D L A K Sbjct: 956 HDEIDAAGLLVPWLARWKQGQAQPLPFFGRTSWAYAEALAKNPDK----PDKALAAAWQK 1011 Query: 1071 FLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 + + V + D+ +R +P + ++ LLPL Q Sbjct: 1012 WEPNFILGDGVA-QKDEPAIALAFRHQSPLEDPLFAQLAETLLLPLAERLQ 1061 >UniRef50_Q1N2R1 Exonuclease V gamma subunit n=1 Tax=Bermanella marisrubri RepID=Q1N2R1_9GAMM Length = 1101 Score = 571 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 345/1153 (29%), Positives = 538/1153 (46%), Gaps = 101/1153 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML VY SNR++ L + + + P +P+ I+V++ G+A WL+M L+Q GIAANI Sbjct: 1 MLNVYQSNRMEGLLGQLIK-LVLQSDSSPLQPKTIVVENPGLAHWLKMQLAQTLGIAANI 59 Query: 61 DFPLPASFIWDMFVRVLPEIPK----ESAFNKQSMSWKLMTLLPQ--LLEREDFTLLRHY 114 FP+P+ F W + ++ + + ES FNK ++W + +L + +L+R F LL Y Sbjct: 60 QFPMPSRFFWQLQRDLVSDSQEAWQTESIFNKDPLTWFVFDVLSESQILQRPGFELLADY 119 Query: 115 LTDDSDK-RKLFQLSSKAADLFDQYLVYRPDWLAQWETG--HLVEGLGEAQAWQAPLWKA 171 + D D+ +L+QLS++ AD++DQYLVYRPDW+ WE + E WQA LW+ Sbjct: 120 VKDSDDESLRLYQLSTRIADIYDQYLVYRPDWIKSWEQQTFAIDGQPLEEARWQAELWQI 179 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 L + G P HRA+L + F+ L LP V G S LP +++L L Sbjct: 180 LRQEAISRGFPLHHRASLTEDFLHLL-QTAESIESLPKDVIFFGFSTLPKNQIESLALLS 238 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 H ++HLL NP + YWGDI D A+L R + Sbjct: 239 SHCDVHLLTPNPSQTYWGDILDERLQARLRLRGKSVPMA--------------------- 277 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 D GN LLAS G++G++Y LL DL+ +E D FVD +LL IQ+ IL L+ + Sbjct: 278 --DSGNALLASLGRMGQEYQRLLLDLDVYEEHDLFVDADDQSLLGRIQNQILHLQQSSSQ 335 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 +I +P D SI CHS REVE + L L + + P+DI+VM Sbjct: 336 PEHI------------EPNDDSIKIVGCHSAMREVE-VLHDHLLDLLQQSDVDPQDIVVM 382 Query: 412 VADIDSYSPFIQAVFG-----SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 + D+ Y+P+I AVF +PY+ISDR ++ HP++ FI LL++P SR Sbjct: 383 IPDVARYAPYIDAVFQGGVDNRQGDRVRIPYSISDRPIQEEHPLINGFIQLLNMPKSRMS 442 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 +V+ALL++P + +FD+ E+ L ++QW+ + IRWG D+ + + LP Q+TW Sbjct: 443 YSEVIALLEIPAVYRKFDLDEKQLHQVKQWLELAAIRWGYDETHRSKQGLPKWQQNTWLH 502 Query: 527 GLTRMLLGYAMESA----QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 G R+L+GYA + P + GL A +G + + + +L + Sbjct: 503 GFQRLLMGYAFSERLAPNDELPFDISPVENVEGLEAASLGPVMNFVNELYEFVLATENLH 562 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 EW +D L FF E + + I Q + + + +P S++ + Sbjct: 563 SCTEWRYFLQDSLQRFFDVTTEEQPVLEQIHQVLENWLQTSQYVNFSHDIPFSVVYQGVQ 622 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 Q L + SQ F+ G VN CTL+PMRSIPFK V +LG+ND YPR + DLM + Sbjct: 623 QGLQKNNGSQHFMIGRVNFCTLLPMRSIPFKYVAVLGLNDQEYPRTVPGNSLDLMRFNRR 682 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 GDR+RRD+DRYLFLEA++SA+Q L++SY + N+ PSV++ E +DY+ + + Sbjct: 683 VGDRNRRDEDRYLFLEAILSARQGLWLSYRSLDQKQNTPMTPSVVLAEFMDYLDINFF-- 740 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNY-QPGERQSYAREWLPAASQ--------- 812 E+ L H F+ Q + + SY W + Q Sbjct: 741 --------SGESAASQILFTQHPLQAFNRQYFIAGSKLHSYQTNWFKSIYQLQSDANQTF 792 Query: 813 ---AGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 GK+ + V L TL RF+ P RAF +L + F D EP Sbjct: 793 QEEKGKSSVPVLSQPNGINMLEVGLSTLVRFFQLPARAFLNQQLNIQFHNLADMHEDEEP 852 Query: 870 FILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 F L GL RY +L ++ + R LP+G GE W+ Q ++ + Sbjct: 853 FELSGLDRYAAKDYILQQTIQGRSID----PRRLQPWLPFGKIGERHWQRTRQSVEDVLA 908 Query: 930 RVIACRQPGQSMEIDLACN-------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWL 982 + + +++ + GW+ +V L+ + + ++L + Sbjct: 909 EATSMGLENKEGPLEINLACEYQNGQNTSLVGWINEVYQGRLVLLKVAKFQAKHLIELLI 968 Query: 983 EHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESG 1042 E A G S + +D P++A +A YL++L+ Y + PL +PE+ Sbjct: 969 ESAALNA-QGYNYSGCLVTQDIRINVKPMSASEAKSYLNKLLSYYFSHQNQPLNFMPETA 1027 Query: 1043 GAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETM 1102 A + D QKA +F++ + + E D Y R + ++ Sbjct: 1028 WALY--------NPTTKQDLRSQKALQRFVEVNDYSYYDP-ERLDPHYHRCFGNVS-ILP 1077 Query: 1103 EAIVEQSQRFLLP 1115 E ++E + P Sbjct: 1078 EQLIEVAHDLFEP 1090 >UniRef50_Q2SQD5 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQD5_HAHCH Length = 1073 Score = 567 bits (1461), Expect = e-160, Method: Composition-based stats. Identities = 348/1139 (30%), Positives = 561/1139 (49%), Gaps = 85/1139 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML++Y+SNR + + +P + ++++VQS GM++WL L++ G+AAN+ Sbjct: 1 MLKIYYSNRQEQ-LLALLADALARPKANPLQSDILIVQSQGMSRWLSQQLAEINGVAANL 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYL----- 115 +F LPA IW + ++P+ F+K ++W+LM L P L + +F L YL Sbjct: 60 EFQLPAQLIWRLARLCRDDLPELHPFDKSILTWRLMQLAPGLPDSGEFDALHRYLHTGPD 119 Query: 116 TDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEY 175 D + +QLS + AD+FD YL+YRPDWL++WE G E AWQ LW+ L Sbjct: 120 RKSPDLLRNYQLSQRIADVFDHYLMYRPDWLSEWEQGLPTEAGASEHAWQIELWRGLTHD 179 Query: 176 THQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIE 235 HRA + Q L LP R+F+ G+ + P YL LQ +HIE Sbjct: 180 -----SDAPHRARVLQELAAQL---PQHVDKLPPRLFVFGVPYMAPAYLDVLQNAARHIE 231 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 +H+ NP +YWGDI ++++ TR G D Sbjct: 232 VHMYQWNPTEHYWGDIASRKDISRIRTR---------------------DGAEVSGLYDE 270 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 G+ LLASWGK RDY+ +L D+ ++ P LL +Q+D+ L Sbjct: 271 GHRLLASWGKPLRDYLDVLQDVSVTEADCYVPPAPPQTLLQRLQADVFNL---------- 320 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 R + D S+ H+CHS REVE L+D+L+ +L+ D +L+PRDI+VM DI Sbjct: 321 ----RQEPWPESPADDRSLQVHLCHSALREVEALYDQLMDLLQTDHSLSPRDIVVMTPDI 376 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 + Y+P ++AVFG+ R +P++++D ++++ + L L RF + +VL LL+ Sbjct: 377 EQYAPLVEAVFGAQQGARRIPWSLADLSRYSDFNLVQSVLQLFDLLPGRFTASEVLGLLE 436 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 +P + RF + EE L LRQW++E+ IRWG+D ++ + + Q +W+ G+ R+LLG+ Sbjct: 437 IPAVGRRFGLDEELLSRLRQWLHEASIRWGLDAESQQAYGVDCADQFSWKAGIKRLLLGF 496 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 A+ A +Q V PY G A+ +G L+ L+ L WR +++ + ++W + + Sbjct: 497 ALPDAMQMYQDVAPYPHIQGGDADSLGALSQLIDTLARWRAQISRGQTPQQWADLLHSWM 556 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 N F PD + E A+ + + Q + E A + +PL++++ +L +RLD Q FL Sbjct: 557 NDLFDPDRDEEQALQVAREAVQEWLQETQTAGFDQPLPLAVVKQDLRRRLDSPLRRQSFL 616 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 G V C ++PMRSIPF+VV +LG+N +PR GFDL+++ P++GDR+RR++DR+L Sbjct: 617 TGAVTFCAMVPMRSIPFRVVAVLGLNHDQFPRHQTQPGFDLIAEYPRKGDRARREEDRFL 676 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 FLEAL++A+ Y+SY+GRSI+DNSE PSV++ EL+D I ++ Sbjct: 677 FLEALLAARDVFYLSYVGRSIRDNSECAPSVILSELLDTIQ-------------EQGGEA 723 Query: 776 VKAHLTCLHTRMPFDPQNY-QPGERQSYAREWLPAASQAG---------KAHSEFVQPLP 825 + H PF P + G SY EWLPA + P Sbjct: 724 AIRRILREHPLQPFSPHYFTADGGHFSYQSEWLPALHGRHSKQEYQAFCPESLPPREREP 783 Query: 826 FTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL 885 F+ V L++L+RF +P R F Q RL + D EPF L GL +Q+ + L Sbjct: 784 FSTDHPVELDSLRRFLRNPTRYFVQQRLNI-LLDASDLAQDREPFDLAGLHGFQVKELWL 842 Query: 886 NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL 945 L+ E A G LP GA G I + Q+++ L ++ +EI Sbjct: 843 QELMNAATDEEAESYLEAKGLLPGGAVGAISRKQTRQQLEALREQAREL-YGKDRIEITP 901 Query: 946 ACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCA--SGGNGESRLFLRKD 1003 +G+ + G + + P GLL + S ++ + LWLEHL C + + + Sbjct: 902 EKSGLPLRGAVAGIGPRGLLHLTTAGCSASRMLLLWLEHLALCGVTADALARPSFLVCRQ 961 Query: 1004 GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDST 1063 G + P+A QA L++L++ + + P+ P++ +++T + ++ + Sbjct: 962 GVGHYRPVAQNQARQLLAELMDLLTQSENEPVRFFPKTSLKYVETKNNPRSRSEPI---- 1017 Query: 1064 LQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS 1122 L + GN GE D + +WR E V ++ P ++ Sbjct: 1018 -----NAALNCWLGNEWQPGELADAHHFLVWRFEAETLNERFVALAESIWEPALEHWEA 1071 >UniRef50_B8FB93 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FB93_DESAA Length = 1085 Score = 564 bits (1452), Expect = e-159, Method: Composition-based stats. Identities = 326/1134 (28%), Positives = 539/1134 (47%), Gaps = 81/1134 (7%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 LRVY SN L L + ++ ++ L P E E++L Q+ M +WL + L++ G AN+ Sbjct: 15 LRVYSSNSLQTLARQLADLLVKDPL-PPLEQEIVLTQNPVMGRWLYLELAKINGACANLR 73 Query: 62 FPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 LP +++ ++F V+P E ++S F+ +M+W++M L + +E FT ++ YL DD Sbjct: 74 VTLPNAYMHELFASVIPPMENEEQSPFSPWAMTWRIMDALARFMEEPPFTEIQRYLQDDP 133 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 D RK F LS + A +FD Y+++RP+ + W+ G WQA LW+ + + Sbjct: 134 DGRKQFGLSRRIAGVFDGYMLFRPEMILNWDHGKGG-------HWQAILWREISQ----- 181 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 G HR L F + L S + P LP R+ + G+ +PP +L +G+ + ++L Sbjct: 182 GFNDRHRPGLRTDFFKALRSGKSRPGVLPKRISLFGVWGMPPFHLDVFSGVGRMLPVYLF 241 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 NPC+ YW + ++ TR E+ + GN L Sbjct: 242 HVNPCKEYWAHAFSDKQITRITTRSPFTRPEE-------------------LYLEKGNAL 282 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 LAS G +GRD++ L++ L+ + + LL IQ +ILE + E+ Sbjct: 283 LASLGGVGRDFLGLVAGLD-CHPQELYESPDRTALLGMIQGEILEFKE--------EDGR 333 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 ++ K P D S+ H CHSP RE+EVL+D +L L+EDP L P+DI+VM D+D ++ Sbjct: 334 KTQEKARPLPGDRSLAIHNCHSPMREMEVLYDHILKFLDEDPDLDPQDIMVMAPDMDKFA 393 Query: 420 PFIQAVFGSAP-ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 P+++AVF S LPY I+ + R P + AF+ + L SRF + VL L +P Sbjct: 394 PYVEAVFASPGPGGIRLPYCIAHKEVRTVSPSVNAFLEIFDLCQSRFEAAAVLDLAGLPA 453 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 +A +F +E+ L L +W+ ++ +RWG + D+ + L LPATG +TW GL R++LGYAM Sbjct: 454 VAEKFGFSEQDLETLARWIAQTRVRWGANADSRKALGLPATGDNTWESGLDRLMLGYAMA 513 Query: 539 S-AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + +Q++ P+ + + A L+G A L R L + ++EW+ + ++ Sbjct: 514 GLDEEFFQNISPFGDLAMEDAPLLGRFAEFTEALFQLSRKLEKSHEIQEWVKILEGVVQE 573 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 F PD + L++ YG V ++++ +A L+Q S L Sbjct: 574 FLSPD---AEDLHLLQIALSKTAKAQSEQGYGREVAAAVVKAAVAGLLEQSSPSGSILRR 630 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 VN C++ IP KV+CL+GM+DG +PRQ +GFD M++ P+RGDRS R DDR+ FL Sbjct: 631 GVNFCSIAQGAGIPAKVICLVGMDDGAFPRQDGGMGFDYMARSPRRGDRSPRGDDRFSFL 690 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 +A+I+AQ +L+IS+ G+ IQDN+ PS LV ELIDY+ L Sbjct: 691 QAIINAQSRLHISFTGQGIQDNAALCPSPLVSELIDYVEAGFDLSDSGP----------- 739 Query: 778 AHLTCLHTRMPFDPQN--------YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP 829 L +H PF P + + S A + L + + P Sbjct: 740 --LVVVHKLQPFSPDYFSGQCPGLFSFSRQYSQAADILQRGEKQSRQFFSQPLEEPEAQD 797 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV 889 +++ LE L F+ P ++ + R+ V + E F L GL R+ + +++ V Sbjct: 798 KSISLEALCAFFRMPPKSILRDRVGVFLDAYTEAMDSAEAFSLGGLERHVLAGKMVEKRV 857 Query: 890 EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA-CRQPGQSMEIDLACN 948 + + L+ +A G+LP+G G + ++ A + A + Q ++ D+ Sbjct: 858 QGRSSLDLYALAKAQGELPHGNVGAFAFNQLENQISPFARKAEAMLSEANQRLDADVMAG 917 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASG-GNGESRLFLRKDGEWR 1007 +I G L + P GL+ +R + + W+ HL CA G LF D + Sbjct: 918 EWKIHGRLSPLGPWGLILYRTASAKAYDRLNAWIRHLFLCAVRPGFENKSLFAGTDAVYY 977 Query: 1008 FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKA 1067 + + A+ L+ L E Y +GM P PE+ A+ ++ + + +A Sbjct: 978 YDNVKQNAAVTRLAALAEVYDKGMEFPAPFFPETSFAYAQSMFKTDDVG---------QA 1028 Query: 1068 RTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 + + RGE D + + L P + + + P+ Q Sbjct: 1029 MKAARNKWGPDFYGRGEALDSYAALCFEGLDPLS-REFRDLAVEVYAPMLECEQ 1081 >UniRef50_A4JS85 DNA helicase/exodeoxyribonuclease V, gamma subunit n=11 Tax=Proteobacteria RepID=A4JS85_BURVG Length = 1209 Score = 561 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 386/1192 (32%), Positives = 553/1192 (46%), Gaps = 110/1192 (9%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF------- 54 L + H NR + L L+ ++ L P E E ILVQS G+AQWL++ L+ Sbjct: 9 LMLIHGNRSEQLRDLLVEWIKHYPLA-PLESETILVQSNGIAQWLKLALAADRDPATGEG 67 Query: 55 --GIAANIDFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTL 110 GIAA +D LP+ F+W + VL + + S F+K + W+LM +LP L R F Sbjct: 68 GCGIAAALDVSLPSRFVWQAYRAVLGAESVAEVSPFDKSRLVWRLMRMLPALAARPAFEP 127 Query: 111 LRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEAQ 162 LR +++DD D+RK FQL+ + ADLFDQY +YR DWLA+W G V + L + Q Sbjct: 128 LRRFISDDDDRRKRFQLAERLADLFDQYQMYRADWLARWADGDAVVLDARGGEQPLPDEQ 187 Query: 163 AWQAPLWKALVEYTHQLGQPRW-----HRANLYQRFIETLESATTC--PPGLPSRVFICG 215 WQA LW LV R RA +++ F+ + + P G+P R+ I G Sbjct: 188 RWQAALWHELVADVAGSDASREISSRGGRAAVHEAFMRRIAAWDDDRGPVGIPRRIVIFG 247 Query: 216 ISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELP 275 IS+LP L+AL AL + ++ + NPC +YW DI L +++ Sbjct: 248 ISSLPHQLLEALAALARWSQVMMCVANPCAHYWADIVPDRDLLGRRQPRQQRRTGMPAEL 307 Query: 276 LFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESS--------------Q 321 D +PLLASWGK GRD+I LL +++ Q Sbjct: 308 DL------------DTLHLHAHPLLASWGKQGRDFIGLLDAFDNADAREHYGPKFARIGQ 355 Query: 322 ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHS 381 +D F LL +Q DI +L D SI FHV HS Sbjct: 356 RIDLFESRGASTLLQQLQDDIRDLRPLRETQETW--------PDVDPATDGSIRFHVAHS 407 Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD--RYLPYAI 439 QREVE+LHD+LLA DP+L P+D++V+V DI++Y+P +QAVFG RY+P+++ Sbjct: 408 AQREVEILHDQLLAAFNADPSLRPQDVVVVVPDIEAYAPHVQAVFGLVDRSDPRYIPFSV 467 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 +DR R++ P++ A LL LP++R D+L LLDVP L RF I E L LR W+ Sbjct: 468 ADREQRKADPLIGALEMLLGLPNARLAVSDLLDLLDVPALRKRFGIDETDLPKLRAWIRG 527 Query: 500 SGIRWGIDDDNVRELELPATGQ----HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + IRWG+ L LP HTW FGL RMLLGYA+ S G W + P+DE G Sbjct: 528 ANIRWGLHAQQRASLGLPLDEHAAAPHTWAFGLRRMLLGYAVGSEAGAWHDIEPFDEVGG 587 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP-DAETEAAMTLIEQ 614 L A L+G L L+ L+ R LA+ +W R++ FF D+E + ++ Sbjct: 588 LDAALLGPLVRLIDALDHAWRSLAEPATAPDWCERLRNLKQTFFSAHDSEDAYTLARLDN 647 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 QA + A+ D +PLS++ D +LD+ +SQRF AG V TLMPMR+IPF+ Sbjct: 648 VLQAWLDACTEARLTDVLPLSVVSDHWLSQLDEGGLSQRFFAGAVTFATLMPMRAIPFRR 707 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 VCLLGMNDG YPR P+ FDLM + GDRSRR+DDRYL LEAL+SA+ L++S++GR Sbjct: 708 VCLLGMNDGDYPRARVPMDFDLMRLHYRPGDRSRREDDRYLLLEALLSARDHLHVSWVGR 767 Query: 735 SIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 SI DN R PSVL+ +L D++ L G D + LT H PF + Sbjct: 768 SITDNGVRPPSVLIGQLRDHLAAGWRLAGASGAGPD----ALVKALTVEHPLQPFSVAYF 823 Query: 795 QPG-----ERQSYAREWLPAASQAGKAHSEFVQPLPFT-LPETVPLETLQRFWAHPVRAF 848 P +YA EW +P + + L L F A PV+ F Sbjct: 824 PPDTNDAAAVFTYAAEWRDEPRACRDPAPPAATHVPAIVRDDPLSLRELAEFLAKPVKTF 883 Query: 849 FQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL--------NALVEQDDAERLFRR 900 F RL+V +++ + D EPF L+ L +++ +L+ + + Sbjct: 884 FSQRLRVALDVDETAVDDEEPFELDSLDAWKLQDELIGVQAAHMHDDDALVAARDARMAA 943 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ-----SMEIDLACNGVQ---- 951 R GD+ G FG++ + M +L E+ G Sbjct: 944 IRRRGDVVPGGFGDLASAALLEPMDELFAAYRKQLARWPVAIDGECEVAFQIAGESRVPG 1003 Query: 952 ITGWLPQVQPDGLLR-----------WRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFL 1000 ++ WL Q + D R + + W+ HL G + + + Sbjct: 1004 LSDWLGQWREDSEGRRARLVLETSALVEKGAYRYHKLVGHWVRHLAAN-LAGRHVTTVIV 1062 Query: 1001 RKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDD 1060 K G PLA +L+ L++ + GM PL V ES AWL + + Sbjct: 1063 SKKGIVELRPLAGGDTEAHLTALLQVWDAGMREPLPVAVESAFAWLVRRFGKDGNGA-AP 1121 Query: 1061 DSTLQKARTKFLQAYEGNMMVRGEGD-DIWYQRLWRQLTPETME-AIVEQSQ 1110 + T A Y G+ +GE R + + ++ Sbjct: 1122 EDTRAAAEKAARSKYAGDAYNKGEVAKSASLGRAFPDFDALCADGRFEALAE 1173 >UniRef50_B9CWC7 Exodeoxyribonuclease V gamma chain n=2 Tax=Actinobacillus minor RepID=B9CWC7_9PAST Length = 1085 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 376/1149 (32%), Positives = 574/1149 (49%), Gaps = 102/1149 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M VY+SN+L L ++ + +DPF+PE ILVQS GMAQWLQM +++ G+A N Sbjct: 1 MFTVYYSNQLTALAEMLIHHQKVNPNEDPFQPETILVQSVGMAQWLQMQIAESMGVAGNY 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +FP P SF+W + + P +PKE+ F + M+W+LM ++P +LER +F LR YLT D + Sbjct: 61 EFPFPTSFLWQQYRLLFPHLPKENIFERGVMAWRLMRIIPAVLERPEFQGLRAYLTHDKE 120 Query: 121 K--RKLFQLSSKAADLFDQYLVYRPDWLAQWETGH----------------LVEGLGEAQ 162 + KL+QL++K ADLFDQYLVYRP WL WE G L G+ E Sbjct: 121 QDSLKLYQLATKIADLFDQYLVYRPHWLVHWENGQWQEVVREIQIQPFSTNLQTGIQENV 180 Query: 163 AWQAPLWKALVEYTHQLGQPRW----HRANLYQRFIETLESATTCP-PGLPSRVFICGIS 217 WQ+ LW L+E T + HRA L Q+F E LE T LP R+F+ GIS Sbjct: 181 HWQSLLWNLLIEDTRKDYDELLFTTSHRAYLQQKFFEKLEDLTEEEYKKLPKRIFVFGIS 240 Query: 218 ALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLF 277 +LP L L ++ ++HL F NP + YWGD + A L K+ +Q+ E ++L Sbjct: 241 SLPTTQFATLLKLSEYCDVHLFFLNPSQMYWGDSIENAALEKMALKQQLSETEIQQL--- 297 Query: 278 RDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHN 337 GN LL+ WGK GRD+ L++ + ++ F + ++ L Sbjct: 298 --------------LAQQGNQLLSMWGKQGRDFFDQLAEYS-PEPIELFFENDQESNLSR 342 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 ++ IL +N + D+SI H CHS REVEVL ++LL + Sbjct: 343 LKQAILNNDNPS---------------YLELENDNSIQIHNCHSAMREVEVLQNQLLRLF 387 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY--LPYAISDRRARQSHPVLEAFI 455 E++P L+P+DIIVM ADI+ Y+P+I AVF + +P+ ISD++ Q PV+ +F+ Sbjct: 388 EQNPHLSPKDIIVMAADIEQYAPYINAVFSRYGREDNRYIPFTISDQKISQVDPVISSFL 447 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 +L L DS F +E +L LL+V + +F E L LR W+ ESGIR + + Sbjct: 448 VMLKLRDSTFSAEALLDLLEVEAIGQQFGFNREDLTCLRHWIKESGIRSTLTIEQENGW- 506 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 ++W GL R+LLG ++ G WQ+ + ++ES GL AE VG LA + +L W Sbjct: 507 ---QNYNSWENGLDRLLLGSCLKEENGIWQNTIAFNESYGLSAERVGKLAEFIEKLTAWS 563 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 + P+ W D++ A + + + A+ LI+Q+ +A+ A L A++ + V Sbjct: 564 VLSLESHPISTWKQALEDLVKAVYQENDASNDALFLIQQELEALEALVLQAKFDEPVAFE 623 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 ++ L RL+ + F+ G VN CTL+PMR+IPFKVVCLLGMN+ +PRQ FD Sbjct: 624 VIERALQDRLNSQSHVMHFMTGKVNFCTLLPMRAIPFKVVCLLGMNEADFPRQPVINSFD 683 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 LM P++GDR+RR+DDRYLFLEAL+SA++ YISY+G+S+ + ER PSVLV + +DY+ Sbjct: 684 LMQYHPRKGDRARREDDRYLFLEALLSAEEVFYISYVGKSLVKDEEREPSVLVSQFVDYL 743 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 + + L L H F +N++ G SY +EWL A QA + Sbjct: 744 AKYYSLS-----------------LEQEHPMNAFSERNFKSG-YVSYHKEWLEFAQQAVE 785 Query: 816 AHSEFVQPLPF--TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE 873 +H F + LP LP+ + L+ L F P + FF L + FR ED EI DTE F L Sbjct: 786 SHDFFAKSLPENSELPKEIELDELIAFIQSPTKQFFTRNLGIYFREEDDEIEDTEHFSLS 845 Query: 874 GLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA 933 L YQ+ QLL E F + G++P FG++ +Q + + Sbjct: 846 KLDEYQLTAQLLTTSSEMTSP--FFEKETLKGNIPVLNFGKLTQTELTNRIQDMRVELAE 903 Query: 934 CR-QPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGG 992 + L C V++ G LP + ++ WR L ++LW+ L+ Sbjct: 904 YLKGESDILPFSLQCTQVELVGNLPNLFGQEIVLWRVGKLRDKDTIKLWIYFLILTLLEK 963 Query: 993 NGESRLFLRKDGE---WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTC 1049 +++ + + + F + QA L I+ + + +S T Sbjct: 964 PFALKMYTLEGDKLTCFTFNTIEVSQAKEILEIYIKAF---------LKNKSNLTIAVTQ 1014 Query: 1050 YDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQS 1109 + ++ + + EG + + +R+ Q + +AI + + Sbjct: 1015 DLENYFKKMPQENIAEYCYQSLSKLSEGLN-----DEASYLKRILTQSSLIDYQAIHQNT 1069 Query: 1110 QRFLLPLFR 1118 + + Sbjct: 1070 LDWFALMQE 1078 >UniRef50_A6VQ90 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VQ90_ACTSZ Length = 1113 Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 413/1164 (35%), Positives = 608/1164 (52%), Gaps = 101/1164 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 +YHSN LDV ++ ++++ DPF+ E ILVQS GMAQWLQ+ +++ GIAAN+ Sbjct: 5 FFIYHSNDLDVQAGILISLLQQRS-TDPFQSETILVQSPGMAQWLQLKIAEADGIAANLR 63 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS-- 119 FP+PASFIW + LP++ ++S F K++M+W LM LL L L Y D + Sbjct: 64 FPMPASFIWQQYADNLPDVSEQSPFGKEAMTWHLMALLAIL----PLPRLNEYWRDHALG 119 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL-----------------VEGLGEAQ 162 ++ K +QL+ + ADLFDQYLVYRPDW+ WE G + + + Sbjct: 120 NQEKRYQLARQIADLFDQYLVYRPDWIDAWEKGDDRYIENQLRYALADNPVLLAQIKQDI 179 Query: 163 AWQAPLWKALVE--YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 WQ LW+ LV H P HR NL+ ++ TL + P LP R+F+ GISALP Sbjct: 180 RWQGQLWRELVAAVCRHTKDSPARHRVNLHLTYLNTLATG--RPKNLPPRIFVFGISALP 237 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 YL+ LQA+ +H ++HL F NP ++YWGD+ DP ++ +L + R DRE ++ Sbjct: 238 KAYLETLQAISRHSQVHLFFNNPSKHYWGDLADPRFIRELSLKTYREHGSDREANWLSET 297 Query: 281 E------NAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL 334 E + D +G+PLLA+WGKLGRD+ YLLSDL +++E A+ + +L Sbjct: 298 EKVRLKNGEFERSADDELLQIGHPLLATWGKLGRDFFYLLSDL-NAREFTAYTPLEGADL 356 Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 L +++ IL L D S+ H CHSP REVEVLHD LL Sbjct: 357 LTQVKNRILNLVP------------DKQQPLQPPKADRSVVLHACHSPMREVEVLHDYLL 404 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA------------DRYLPYAISDR 442 + D TLTP+DI+VMVADID Y+P+IQAVFG +RY+P++ISD Sbjct: 405 RQFQADETLTPKDIVVMVADIDRYTPYIQAVFGQYQRYTEDRIGKKRPDERYIPFSISDG 464 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + ++ +L ++SLL L +S+F +E+VLA LDVP + +F+I L +R WV I Sbjct: 465 KLSENDVLLATYLSLLDLKNSQFSAEEVLAFLDVPAIREKFEIALSDLPQIRHWVARVEI 524 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 R+G+D + + + W+ GL R+LLGYAM +QG WQ L +D+S GL ++VG Sbjct: 525 RFGLD----KNCDSAVKNYNAWQAGLERLLLGYAMRESQGIWQDSLGFDDSDGLKGQVVG 580 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 +LA+ L +L W L Q +E+W +L FF+ D +T I +++ Sbjct: 581 NLAAFLDRLAQWHTFLQQSHSIEKWQQNLTALLTDFFVADEQTVDIQQYIRDAVRSVTEL 640 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + + + ++ + + ++L+ S +FL G V+ CTL+PMRSIPF+VVCLLGMN+ Sbjct: 641 LRSMDFQEDISAEVMAEVMTEKLNDNPNSLKFLVGKVSFCTLLPMRSIPFRVVCLLGMNE 700 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 YPR+ P FDLM ++GDRSRRDDDRYLFLEAL++AQ++LYISY+GRSI DN R Sbjct: 701 NDYPRRRTPNSFDLMRYHRRKGDRSRRDDDRYLFLEALLAAQEQLYISYVGRSITDNQPR 760 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 PSV+V +L DYI + +H F PQN+ G +++ Sbjct: 761 QPSVVVSQLQDYINDNL-------------ADNALRLTEKVHPMTIFSPQNF-YGNDRTF 806 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 A+EWLP++ ++ + L+ L +F HPV+ FF+ +L V F+ +D Sbjct: 807 AKEWLPSSPAMPSGENKQAVLPLTEKLTRIELDQLVKFVRHPVKYFFENQLGVYFQNDDD 866 Query: 863 EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQ 922 IPDTE F L+GL Y+I L ++ R F R G LP G FG+++ Sbjct: 867 LIPDTENFTLDGLDLYRIKDDFL--TYSDEELCRYFERLSVKGILPRGNFGKVYEAKVRS 924 Query: 923 EMQQLADRVIA-CRQPGQSMEIDLACNGVQITGWLPQVQPD----GLLRWRPSLLSVAQG 977 EM+ ++V Q Q+ I+L +GV+ITG L + D + WR LS G Sbjct: 925 EMETFREKVRDYLLQTPQTQAIELDIDGVKITGNLTALYGDSPDKRRIAWRVGNLSDGFG 984 Query: 978 MQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLV 1037 ++ W+ HL CA+G S L + +D +AAE+A L + Y M+ + Sbjct: 985 LENWVYHLAKCATGEVT-SSLMITRDKSVTLAAIAAERATAQLGVYVRAYLCAMNRIQCI 1043 Query: 1038 LPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQL 1097 A LK + + R A RG D +++RL L Sbjct: 1044 PTMKITALLKCR-------------SADELRRLLDNAARPTDYNRG---DPYWRRLLLNL 1087 Query: 1098 TPETMEAIVEQSQRFLLPLFRFNQ 1121 + ++ + L + Sbjct: 1088 DDGELTDVLPTLTDWFAMLVDAYE 1111 >UniRef50_A3JIN1 Exodeoxyribonuclease V gamma chain n=2 Tax=cellular organisms RepID=A3JIN1_9ALTE Length = 1224 Score = 559 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 384/1227 (31%), Positives = 567/1227 (46%), Gaps = 138/1227 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-------- 53 H+N L+ L + FI ++ L P + E LVQS G+AQWL++ L++K Sbjct: 19 FHAIHANHLEDLRRAVVFICQQNPL-PPLQSETFLVQSNGIAQWLKLALAEKRSENGSEG 77 Query: 54 -FGIAANIDFPLPASFIWDMFVRVL--PEIPKESAFNKQSMSWKLMTLLPQL-LEREDFT 109 GIAA +DF PA FIW + VL ++P++S F+K+ + W+L LLP+L L E F Sbjct: 78 GLGIAAGMDFLFPARFIWQAYRAVLPDGDVPEQSPFDKRRLVWRLYRLLPELVLTDEAFN 137 Query: 110 LLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEA 161 L +L + FQL+ K ADLFDQY V+R DWLA WE G V + + + Sbjct: 138 PLARFLDGSDTDLRAFQLAEKVADLFDQYQVFRADWLAAWEQGRDVVISTRNGEKPIEQD 197 Query: 162 QAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATT--CPPGLPSRVFICGISAL 219 WQ LW+ LVE T + R+ ++ RF++ + P LP R+ + G+S+L Sbjct: 198 TRWQPMLWRKLVEDTG--AEAHTSRSQIHTRFMKQGQQVAAPSHPSRLPKRIVVFGVSSL 255 Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 P L+AL L + ++ L NP ++YW DI L K ++ Sbjct: 256 PRQALEALYVLSRFSQVVLCVHNPSQFYWADIVSDRELLKAERKRGASH----------- 304 Query: 280 SENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLE-----------SSQELDAFVD 328 Q+ ++D NPLLA+WGK GRDYI LL + + Q++D F + Sbjct: 305 -PTLSQIDDADQLHQHANPLLAAWGKQGRDYIRLLDEFDNPDEYRNSFQTPDQKIDIFSE 363 Query: 329 V---TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRP------------------- 366 LLH +Q+DI L + S Sbjct: 364 HGAGQTTCLLHQLQNDIYNLTPLQEIRDEQRKLDLSQGHPLTAEGSLSAEGSLSAEGSLP 423 Query: 367 ---------LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 D S+ FH HSPQREVE+LHD+LLA D TL PRDI+VMV DI+ Sbjct: 424 AEGSLSSEGFPKADGSVAFHNAHSPQREVEILHDQLLAAFNADDTLRPRDIMVMVPDINV 483 Query: 418 YSPFIQAVFGS--APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 Y+P IQAVFG A R++P+ ISD+ R PVL A +L+SLP RF ++++LL+ Sbjct: 484 YAPHIQAVFGRYTAGRKRHIPFTISDQGQRNHEPVLIALETLMSLPRHRFGVSEIISLLE 543 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT-GQHTWRFGLTRMLLG 534 VP + RF+I EE + R+WV + IRWG+ + LELPA ++TW+ GL MLLG Sbjct: 544 VPGIRDRFEIAEEEIPLARRWVEGANIRWGLHGAHRESLELPADLDRNTWQSGLRSMLLG 603 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 Y M W V PY E GL A L G L + +L + L R +EW + M Sbjct: 604 YGMGD-DEPWAGVQPYGEIGGLQASLAGRLGDFVYRLEKVWQDLQASRTPQEWEALFAAM 662 Query: 595 LNAFFLP-DAETEAAMTLIEQQWQAIIAE-GLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 L FF + + +Q + + + +PL++++D L LD+ ++Q Sbjct: 663 LEQFFHKVEGHDLLLLNRFRRQLEQWLDDTLAAGLEHQLLPLNIVKDVLLDGLDEGGLNQ 722 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 RFLAG VN TLMPMR+IPF+ VCLLGMNDG YPR P+ FDLM+Q + GDRSRR+DD Sbjct: 723 RFLAGKVNFATLMPMRAIPFRTVCLLGMNDGDYPRSRPPVDFDLMAQDYRPGDRSRREDD 782 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 RYLFLEA++SA+++LYIS++GRSI+D+S R PSVLV +L D++ LPG + Sbjct: 783 RYLFLEAMLSAREQLYISWVGRSIRDDSPRPPSVLVGQLQDHLNGLWQLPGQPDV----- 837 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP---LPFTLP 829 V LT H PF + + +A S Q Sbjct: 838 --AVTDALTTCHPLQPFSRDYFPQSRHARSLFTYEHEWRRAHGTVSTDAQHKALAYQQPE 895 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV 889 E V L L F P+ F+Q RLQV F + + DTE F L GL R++++ +L+ + Sbjct: 896 EPVTLNDLSGFLKKPIDTFYQRRLQVRFEDVEDDDTDTENFDLNGLDRWRLDTELIEQGL 955 Query: 890 EQDDAERLFR--------RFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQS- 940 + +E GDL G + L +R + Sbjct: 956 LKASSEEDLEHRLETTLDCMARRGDLGMGTTEHRLRNELSGRLPNLFERYQSALAEWPEE 1015 Query: 941 ----MEIDLAC----NGVQITGWLPQVQPDGLLRWR---------------PSLLSVAQG 977 + + V++ + ++ + + A Sbjct: 1016 VGEPLAFEYRLANSTGSVEVLDLIDHLRRNHEGNICRLVIAGSSLLTGSGNTKKIRYANL 1075 Query: 978 MQLWLEHLVYCASGGNGESRLFLRKDGE-WRFPPLAAEQALHYLSQLIEGYREGMSAPLL 1036 M+ W+ HL + E+ + +++ RF PLA E A +L ++ + + + L Sbjct: 1076 MRDWVIHLAGQIAAQPFETLILGKEEKRNVRFAPLAKETASKHLDAILARWMDANTRALP 1135 Query: 1037 VLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ 1096 V E+G AW+ + Y ++ + A + QAY + E D + + + Sbjct: 1136 VHCEAGFAWIYSFYQSKKFLG-----EHEHAISDAEQAYT----LALERDTGYLRGAFES 1186 Query: 1097 LTPETME-AIVEQSQRFLLPLFRFNQS 1122 + +PL+ Q+ Sbjct: 1187 AELLLESGEFEALLHQLYVPLWEAEQN 1213 >UniRef50_D2BZV3 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Gammaproteobacteria RepID=D2BZV3_DICD5 Length = 1169 Score = 558 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 406/1185 (34%), Positives = 581/1185 (49%), Gaps = 101/1185 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF-----GI 56 L HSN + L ++ + L E E+ILVQS G+ QWL++ L++ G+ Sbjct: 10 LMAIHSNHPEALRDVLVSWMAAHPLSG-LENELILVQSNGIGQWLKLALARDTHDGGCGV 68 Query: 57 AANIDFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHY 114 AA +D LP+ F W + VL +P+ S F+K + W+L+ LLP LL + +F L + Sbjct: 69 AAALDIQLPSRFFWQAYRAVLGREQVPETSPFDKPLLVWRLLRLLPDLLTQPEFAALARF 128 Query: 115 LTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEAQAWQA 166 L D+D RK +QL+ + ADLFDQY VYR DWLA W G V E L E Q WQ Sbjct: 129 LRQDTDLRKHYQLAERLADLFDQYQVYRADWLADWSEGRDVLTSHRRGVEPLPEEQRWQP 188 Query: 167 PLWKALVEYTHQLGQPRWHRANLYQRFIETLESA--TTCPPGLPSRVFICGISALPPVYL 224 LW+AL+ T + RA L++RF++ ++ + P GLPSRV + GIS+L L Sbjct: 189 LLWRALLADTGE-ALSGTSRAALHRRFLDEVDRRGDSERPAGLPSRVVVFGISSLSQQAL 247 Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG 284 + L A+G+ ++ + NPC +YWG+I L + +++ E+ Sbjct: 248 ELLAAIGRWTQVFMCVHNPCEHYWGNIIADKDLLRAERARQQRKPGMPEVIAL------- 300 Query: 285 QLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ-----------ELDAFVDVTPDN 333 + +PLLA+WGK GRDYI LL + + + +D F D Sbjct: 301 -----EELHQHAHPLLAAWGKQGRDYIGLLDEYDQREQYESLLQPVISRIDLFNSNGEDC 355 Query: 334 LLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL 393 LLH +Q DI +L A + RS DSS+ FH+ HSPQREVEVLHD+L Sbjct: 356 LLHQLQDDIRDLRPLAES--------RSRWPAIDSDQDSSVRFHLAHSPQREVEVLHDQL 407 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD---RYLPYAISDRRARQSHPV 450 LA DPTL P D+IVMV DI+SY+P IQAVFG RY+P++++DR ARQ++ V Sbjct: 408 LAAFAADPTLRPSDVIVMVPDINSYAPHIQAVFGLIDRQKDPRYIPFSVADRGARQNNLV 467 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 L A LL LP SR DVL LLDVP + RF I EE L L++W+ + +RWG+ Sbjct: 468 LAALEKLLHLPQSRVAVSDVLDLLDVPAVRQRFAIEEEQLPLLQRWIRAANVRWGLHARQ 527 Query: 511 VRELELP-ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 + L LP A Q++W FGL RMLLGYA+ + G W+ + P DE GL A L G LA LL Sbjct: 528 RQSLNLPDAPEQNSWFFGLRRMLLGYAVGAG-GAWRDIEPLDEIGGLDAALAGQLAWLLD 586 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA-ETEAAMTLIEQQWQAIIAEGLGAQY 628 +L+ + L Q +W R +L+ FF D E + +++ Q + Sbjct: 587 RLDYSWQQLCQPATPVQWCERLRVLLSTFFAADDGEDGFMLLQLDEGLQNWLEACESVAL 646 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 +PLS++R+ +Q ++Q F AG V TLMPMR+IPF+ VCLLGMNDG YPR Sbjct: 647 TQELPLSVVREHWLGLFEQTSLTQPFFAGAVTFATLMPMRAIPFRHVCLLGMNDGDYPRN 706 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 PL FDLM Q + GDRSRR+DDRYLFLEAL+SA+++LYIS++GRSI DNSER PSVLV Sbjct: 707 RVPLDFDLMGQDYRPGDRSRREDDRYLFLEALLSARERLYISWVGRSIHDNSERPPSVLV 766 Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY-QPGERQSYAREWL 807 +L D++ + + V LT H PF P+ + SYAREW Sbjct: 767 AQLRDHLSNGWRIV---------NGQDVLPALTVEHRLQPFSPEYFTAGSSLFSYAREWR 817 Query: 808 PAASQAGK-----AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 A + + + L L F PVR+FF++RL V F ED Sbjct: 818 AGLPSYDGASSQTAAASDAVLDDYVQDGVLTLRQLADFVRDPVRSFFRLRLNVWFEQEDP 877 Query: 863 EIPDTEPFILEGLSRYQINQQLLN--------ALVEQDDAERLFRRFRAAGDLPYGAFGE 914 D EPF ++ L +++ +L+ + + +R G+L G F Sbjct: 878 TSQDQEPFAIDALENWRLQHELIQVQKAALQRQIPREQALAEHLQRITRRGELAPGGFAT 937 Query: 915 IFWETQCQEMQQLADRVIACRQPG-----------QSMEIDLACNGVQI-----TGWLPQ 958 + + + M L R R + ++ N +++ L Sbjct: 938 VLEQDLAEPMADLFTRYEQERDKWPTPIPDEPLSLPELPLEDWLNELRLDEQGNRCRL-V 996 Query: 959 VQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALH 1018 ++ GLL + + + W+ HL GG+ + K+G P L QA Sbjct: 997 LESGGLLHPTRRSYRLDKLLPFWVAHLAGH-LGGHALHSTLVSKNGTVHLPALEPAQAAA 1055 Query: 1019 YLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGN 1078 Y L++ +REGM PL V ++G WL+ D + AR + + N Sbjct: 1056 YWQSLMDAWREGMRCPLPVAVKTGFRWLE---VGGELGQSADGEAGKAARQCYEEHDPAN 1112 Query: 1079 MMVRGEGDDIWYQRLWRQLTPETME-AIVEQSQRFLLPLFRFNQS 1122 + + R + + Q+ L PL ++ Sbjct: 1113 RKYAESASNPYLARAFPTFEHLWADGEFARWVQQLLAPLHHTLKA 1157 >UniRef50_Q7VRF1 Exonuclease V, subunit n=2 Tax=Candidatus Blochmannia RepID=Q7VRF1_BLOFL Length = 1139 Score = 557 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 374/1148 (32%), Positives = 612/1148 (53%), Gaps = 39/1148 (3%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M VYHSN LD+ L+ ++ ++L +P +PE+IL++ M+QW+++ L+ FGI+ANI Sbjct: 1 MFMVYHSNCLDLFMRLVINVMSNQKLSNPMKPEIILIEHKIMSQWIEIELTNYFGISANI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 F SFI + + +L + S F+K M WK M +LP+L + +++ YL D + Sbjct: 61 IFMTIQSFIRKISIELLSDGIFISNFSKNFMYWKFMEILPKLYSSQKCAVIQKYLCFDVN 120 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLG-EAQAWQAPLWKALVEYTHQL 179 ++KL QLS + LF +YL+YRPDWL W++ +++ L E Q WQ+ +W+ + +T Sbjct: 121 QKKLGQLSEQLVSLFLEYLIYRPDWLDMWKSNKIIDNLNIEHQLWQSEVWRMFLTHTQLQ 180 Query: 180 GQPRWHRANLYQRFIETLES--ATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIH 237 + N R I L++ LP R+FI G++A+ P+Y + L+ L HI+I+ Sbjct: 181 ----LYEFNSENRCIFLLQNNYQQIDWTKLPDRIFIYGVTAIAPIYWKILKLLSDHIDIY 236 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 L NPC YW + + + + + + Sbjct: 237 LWVINPCEKYWNN------TDYMDDINKHVYHQSNNHSWEVRKKYYYNNRCNKSILKSNY 290 Query: 298 PLLASWGKLGRDYIYLLSDLESS-QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 LL SWG++G ++LLS LE E+ +FV +++LH +Q++IL+ + + V E Sbjct: 291 SLLNSWGEVGFHTLHLLSQLERPLFEIQSFVFPKTNSMLHILQNEILQFKQYSSNEVQKE 350 Query: 357 EFSRSDN----KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 + K L D SIT H CHS RE+EVLHD LL M D L P ++IVM Sbjct: 351 SSIFKKSANMQKNILKSTDQSITIHECHSLYREIEVLHDNLLRMFSNDSALLPGEVIVMA 410 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 +I+ Y+ I+++F + + +SD HP++ +++L++P SRF E++ + Sbjct: 411 PNINCYTESIKSIFNNMFNRQLPFSILSDHSDYIHHPIISTILNILAIPTSRFTVEEIFS 470 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 LL +P +A++F I +E ++ LR W+ ESG+RWG+D D LP T +TW FG RML Sbjct: 471 LLSIPSIASKFSIDDEAMKLLRLWIVESGVRWGLDQDTQENFNLPVTEWNTWYFGFKRML 530 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 LGYA+++ G W+++ PY+ S +V L L L WR L L++W+ R Sbjct: 531 LGYAIKNQNGSWKNIFPYNYISEEYVHVVSGLGEFLEILKKWRNRLNGAYTLQKWMLYFR 590 Query: 593 DMLNAFFL---PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 +M+N FF + E A+ L++ W I+ G+ Y + V +++LRD+L +L ++ Sbjct: 591 EMINDFFDFSKLNVEENQALFLLKNCWTNILESGIQLGYINTVTINILRDKLLIQLMNQK 650 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 + +FL +N C + PM I K++C++G++D +PR F+L+S++ + GD + Sbjct: 651 KNYQFLPNAINFCNITPMCFISCKILCIIGIHDNEFPRDRFSYDFNLISKRFRIGDNNIC 710 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQ-DNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 D Y FL A + ++KLY+S+I + + S+ + ELI+YI Q YL GD+ L+ Sbjct: 711 GQDYYAFLLACLLPKEKLYLSFINKLAFCYGNSISSSIFIDELIEYIAQRFYLIGDQNLD 770 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNY-QPGERQSYAREWLPAASQAGKAH-------SEF 820 + R++ +L ++ MPF N+ ++QS+A EWL AA Sbjct: 771 IISNIKRIRKYLLYKYSCMPFSCSNFIAYSKKQSFANEWLAAAYADKNITVFTQSQQQFL 830 Query: 821 VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRT-EDSEIPDTEPFILEGLSRYQ 879 LP + T+ L L F+ HPVR +FQ RL+V F + + E F + L R+Q Sbjct: 831 TTSLPHIIVSTILLRDLYDFYRHPVRMWFQKRLKVYFYQCTHDILLNDETFFVSNLRRFQ 890 Query: 880 INQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA-CRQPG 938 +N +L++ + + + L+R F +G LPYG+FG+++W QC++M +LA ++ Sbjct: 891 LNVKLIDYFIHNKNIDTLYREFYDSGMLPYGSFGQLYWIEQCEKMYKLASKIKRYYSSKI 950 Query: 939 QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL 998 ++ I +++ G L VQ +GL+RW+P+ LS+ +WLEHL+YC SGGNGES L Sbjct: 951 FTLNITFKIETIKLIGELHSVQENGLIRWKPAYLSMRDCFLVWLEHLIYCFSGGNGESWL 1010 Query: 999 FLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAML 1058 F D W FP + QA L LI GY G++ PLL+L +SGGAW+ +D N + Sbjct: 1011 F-GTDSTWHFPNFSKIQAQELLFFLISGYCLGINVPLLLLYKSGGAWINYVFDWNNRVIC 1069 Query: 1059 DDDSTLQKARTKFLQAYEGN-----MMVRGEGDDIWYQRLWR-QLTPETMEAIVEQSQRF 1112 D +KA + + ++G+ E D + ++L L E + I + S+ + Sbjct: 1070 SDPDIHKKACQRLIYTWQGSSDDTQFSYLRESQDPYLRKLIPLYLNEEDIRIITDVSKDY 1129 Query: 1113 LLPLFRFN 1120 LL L R+ Sbjct: 1130 LLDLMRYR 1137 >UniRef50_C0QI08 RecC n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QI08_DESAH Length = 1206 Score = 555 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 368/1223 (30%), Positives = 558/1223 (45%), Gaps = 138/1223 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG--IAAN 59 L + H+N L+ L + V L E E +VQS GMAQWL++ ++ G I+A Sbjct: 16 LSIIHANHLEDLRDVAVHWVRTHPLG-VLETEQFIVQSKGMAQWLKLAVAADDGCGISAG 74 Query: 60 IDFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD 117 I+ LP +++W + +L IP +S ++++ + W+ ++LP LL + F+ L +L + Sbjct: 75 IETQLPGTWVWTAYRAILGNDTIPTDSPYDRERLVWRFFSILPTLLTDDIFSPLNRFLEN 134 Query: 118 DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEAQAWQAPLW 169 D+D+R+ +QL+ + ADLFDQY VYR DWL QW + AWQA LW Sbjct: 135 DTDQRRQYQLACRLADLFDQYQVYRADWLKQWAGEKDQLLTGGGQWVDIPPQHAWQAELW 194 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 + L R++L+Q F++ P LP RV + GIS+LP L+ L A Sbjct: 195 RRLRARV-PASLRNIGRSDLHQAFLQKASDTRVRPEILPPRVIVFGISSLPKQVLETLYA 253 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 + ++ L NPCR++W DI + L ++ + Sbjct: 254 VSHLCQVLLFVNNPCRHFWADIIEDRELLRID------------HARHSGKATMPTPLDP 301 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ-------ELDAFVD----VTPDNLLHNI 338 NPLLA+WGK GRDYI L+ ++ + E+D F D T LLH I Sbjct: 302 VDVYRHANPLLAAWGKQGRDYIGLVYGYDTPETYRKNFAEIDLFRDVIAQDTRGTLLHEI 361 Query: 339 QSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 Q IL+LE A +++RP+ D +ITF V HS QREVE+L D+LL E Sbjct: 362 QQAILDLEPSAPDN---------ESRRPIARGDRTITFQVAHSRQREVEILQDQLLHSFE 412 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGS--APADRYLPYAISDRRARQSHPVLEAFIS 456 L PRD++VM DI+ Y+P I+AVFG+ R++P+ I+D ++S P+++A Sbjct: 413 TLDNLLPRDVVVMTPDIEGYAPHIEAVFGNLSLDDPRFIPFTIADHPGKKSVPLVKALER 472 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 LL LPD R + D++ LL+VP RF E L L QW+ +GI WG++ L Sbjct: 473 LLHLPDLRMAARDLMDLLEVPAFQRRFGFKETDLPRLFQWIKGAGISWGLNKSQRASFGL 532 Query: 517 PAT-GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 P Q TW FGL RMLLGYA+ + + W ++ PYDE GL A LVG +A ++ +L Sbjct: 533 PPDLDQTTWAFGLNRMLLGYAVGNNKA-WHNIEPYDEIGGLEAHLVGLVAGVVERLEALW 591 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEA-AMTLIEQQWQAIIAEGLGAQYGDAVPL 634 L E W + R + FF P +E + ++Q + A + L Sbjct: 592 TTLQSSACPERWCLILRTLARDFFEPVDASERLVLNRMDQVLDDWLNACTQADLDQELTL 651 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 ++RD +++ + +SQ+FLAG VN TLMPMR+IPFKVVCLLGMNDG +PR PL F Sbjct: 652 CVVRDYFLEKMAVQGVSQKFLAGMVNFGTLMPMRAIPFKVVCLLGMNDGAFPRSHPPLDF 711 Query: 695 DLMSQ--KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 DLM++ + GDRS R+DDRYLFLEAL+SA++ Y+S++GR ++DN ER PSVLV +L Sbjct: 712 DLMAEPGMYRPGDRSTREDDRYLFLEALLSARETFYLSHVGRDVRDNGERTPSVLVGQLR 771 Query: 753 DYIGQSHYLPG----------------------DEALNCDESEARVKAHLTCLHTRMPFD 790 DYI L E+ + + + HLT +H PF Sbjct: 772 DYIDAGWTLEPGCAEPERPESECSEPERLGSECPESGQPNYEGSGLLDHLTTIHPLQPFG 831 Query: 791 PQNYQPGERQSYA-REWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 + E + + + + + L L F +PV+ F+ Sbjct: 832 RAYFSSPEAPLFTYAQEWRNCLGRREDQPREEFLETPPCVDALTLSPLIGFMKNPVKFFY 891 Query: 850 QMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF----------- 898 L + F E D EPF L+ L+ + + LL+A + + L+ Sbjct: 892 NHCLSIRFDDISLENLDHEPFALDLLAPFNLGATLLSAGLAAGVSPELYPGRGGPCVVEA 951 Query: 899 ------RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV----IACRQPGQSMEIDLACN 948 R G+LP FG + + + + R + MEI L Sbjct: 952 AVVEAADRLTRTGELPMAGFGTLAAKNLTAPVIAMLTRYGSLAERWPRACDPMEIALVIE 1011 Query: 949 -----GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ--------------------LWLE 983 +++ WL + L A+ LW+ Sbjct: 1012 QDGWPEIRLDDWLDNMITTDFDDPGAILPQFARQQFYPRNILDKGGKLLLLYPLVPLWIS 1071 Query: 984 HLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGG 1043 H+ CA G + + D F PL A L ++ +R+G++ PL V ++G Sbjct: 1072 HVAGCAM-GIDLTSHLIAPDAVAAFHPLDKAAAFSVLMDILTVFRQGLARPLPVTAKTGV 1130 Query: 1044 AWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGN-MMVRGE-GDDIWYQRLWRQLTPET 1101 A++ Q+A+ + Y G+ RGE G D + QR + Sbjct: 1131 AYVAALMAKDE----------QRAKNDAARVYAGDGFNARGELGYDPYLQRTFPDFDALW 1180 Query: 1102 MEA---IVEQSQRFLLPLFRFNQ 1121 + + LP+ + + Sbjct: 1181 QARDNFFKDLAATLYLPMVQAVE 1203 >UniRef50_B0BTG3 Exodeoxyribonuclease V, gamma subunit n=8 Tax=Pasteurellaceae RepID=B0BTG3_ACTPJ Length = 1114 Score = 553 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 382/1154 (33%), Positives = 593/1154 (51%), Gaps = 88/1154 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M V+ S +L L AL+ + + + +PFEPE +LVQS GMAQWLQM ++ + G+AA+ Sbjct: 1 MFTVFFSQKLSSLAALLIRLQQNDPNPNPFEPETVLVQSVGMAQWLQMQIADQTGVAAHY 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FP P SF+W + + PE+PKE+ F ++S++W+LM L+P+ LE+ +F L YL D+ Sbjct: 61 QFPFPTSFLWQQYRVLFPELPKENIFERESVTWRLMRLIPKYLEKAEFESLNLYLNKDAR 120 Query: 121 K--RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGE-----------------A 161 + KL+QL+ K ADLFDQYLVYRP WL WE+ + L E Sbjct: 121 QYPLKLYQLAGKIADLFDQYLVYRPHWLVHWESNRIEAVLNEILAAIAFREKNERDILAN 180 Query: 162 QAWQAPLWKALVEYTHQLGQPRW----HRANLYQRFIETLESATT-CPPGLPSRVFICGI 216 WQ+ LW AL+E HRA L Q++ E L++ T LP R+F+ GI Sbjct: 181 LRWQSMLWNALIEDIKADSDEEVFMTSHRAYLQQQYFEKLDNLTESEKSKLPKRIFVFGI 240 Query: 217 SALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL 276 S+LP L L+ L +H E++L F +P + YW + + L KL +++ + Sbjct: 241 SSLPATQLAVLKKLSEHCEVYLFFLDPSQEYWAESVEDKTLEKLALKRQLSQQD------ 294 Query: 277 FRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 + GN LLA WGK GR+++ L + E ++ F + D+ L Sbjct: 295 -----------LDALLAEQGNQLLAMWGKQGREFLVQLVEQEPDNTIEVFDEYEGDSNLI 343 Query: 337 NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 +++ IL N + + L D SI H CHS REVEVLH++LL M Sbjct: 344 KLKNAILNFNN--------------EQRFGLAEQDRSIQIHACHSVMREVEVLHNQLLQM 389 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA--PADRYLPYAISDRRARQSHPVLEAF 454 E +PTL P+DIIVM ADID Y+P+I AVF RY+P+ +SD++ P++ +F Sbjct: 390 FERNPTLAPKDIIVMSADIDKYAPYINAVFARYEKGDKRYIPFTLSDQKVTAVDPIIASF 449 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 + LL+L +S F +E +L LLDV L RF++ E+ L+ LR WVN+ GIR+G+ Sbjct: 450 LMLLNLKESDFSAESLLDLLDVKALRERFNLQEQDLQTLRHWVNQVGIRFGLHIQQ---- 505 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 + W GLTR+LLG ++++ G WQ + ++ES GL A LVG LA + L W Sbjct: 506 -DDWQNHNAWENGLTRLLLGTSLKAESGIWQDSIAFNESYGLSATLVGFLAKFIENLTAW 564 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 + Q+ LEEW + ++ F+ E+ A+ L+ + + + A++ +++ + Sbjct: 565 YEFIQQDHTLEEWKARIQKLIGEFYQESNESLDALLLLNSTLEEVANKAEQAEFSESIGI 624 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 ++R L +L+Q++ S +FLAG VN CTL+PMR+IPFKVVCLLGMN+ +PRQ + F Sbjct: 625 EIIRLLLEDKLNQQQSSLQFLAGKVNFCTLLPMRAIPFKVVCLLGMNEADFPRQHSVNSF 684 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 DLM PKRGDR+RRDDDRYLFLEAL+SAQ+ Y+SYIG+S DN +R PSVLV +L+DY Sbjct: 685 DLMQYAPKRGDRARRDDDRYLFLEALLSAQEIFYLSYIGQSTTDNKQRLPSVLVSQLLDY 744 Query: 755 IGQSHYLPGDEALNCDESEARVK--AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 + + + +S + + F P+N+ + SY +EWL Sbjct: 745 LAEHLTEQARLQASEKDSFSEALFWQKMVVQQPLTVFSPKNF-TPQYGSYDKEWLLEQQH 803 Query: 813 AGKA-HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI 871 A L +P + LE L F ++P++ FF +L V FR ++ I ++E F Sbjct: 804 EPLADFLNKSFDLKAEIPTEINLEDLIAFVSNPIKYFFNHQLGVYFRNDEESIAESEKFS 863 Query: 872 LEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV 931 L L YQ+ QL+ +E + E F++ + G+LP F ++ + + +L + + Sbjct: 864 LSDLDDYQLRDQLV--TLEPAEREAFFKQEQLKGNLPIANFAKVSLQDLDDSINELRELI 921 Query: 932 IACRQPGQSMEIDLACN----GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVY 987 + +EI+ +++ G + D ++ W+ S L ++LW+ +L+ Sbjct: 922 LPYLGESDILEIERLFEVEQLKIRLFGNIRNKFADEIVFWKVSSLKDKDYIRLWIYYLLI 981 Query: 988 CASGGNGESRLFLR---KDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGA 1044 A G N E R K +RF ++AEQA L I Y L Sbjct: 982 QAQGLNLELTAIARSKEKAEIFRFNQVSAEQAFSQLQTYISAYVTSFRQ----LTWGIWT 1037 Query: 1045 WLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEA 1104 L ++ +D + Q+ + Y + + QR+ +Q + Sbjct: 1038 DLDNYFEKLSDKQNVAEYCQQQLSALMDKQYF---------EKSYLQRVLQQSSQLDYAQ 1088 Query: 1105 IVEQSQRFLLPLFR 1118 I + + + + Sbjct: 1089 IHTVTLEWFELMQQ 1102 >UniRef50_A1TWK1 DNA helicase/exodeoxyribonuclease V, gamma subunit n=2 Tax=Marinobacter RepID=A1TWK1_MARAV Length = 1197 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 390/1216 (32%), Positives = 577/1216 (47%), Gaps = 137/1216 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-------- 53 H+N L+ L + +I + + P + E LVQS G+AQWL++ L++K Sbjct: 11 FHAIHANHLEDLRRAVVYICRQNPM-PPLQSETFLVQSNGIAQWLKLALAEKRTEDGVEG 69 Query: 54 -FGIAANIDFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLERED-FT 109 GIAA +DF PA FIW + VLP+ +P++S F+K+ + W+L LLP+L+ +++ FT Sbjct: 70 GLGIAAGMDFLFPARFIWQAYRAVLPDGEVPEQSPFDKRRLVWRLYRLLPELVGQDEAFT 129 Query: 110 LLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEA 161 L +L + FQL+ K ADLFDQY V+R DWLA WE G V + L Sbjct: 130 PLARFLDGRDTDLRNFQLAEKVADLFDQYQVFRADWLAAWEQGKDVVITARGEEKALDTE 189 Query: 162 QAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCP--PGLPSRVFICGISAL 219 WQ LW+ LVE + R+ ++ RF+ + + LP R+ + G+S+L Sbjct: 190 ACWQPLLWRKLVEDVGS--EAHTSRSQIHTRFMAQGQHISEPANASRLPKRIVVFGVSSL 247 Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 P L+AL L + ++ L NPC++YW DI L K ++ + Sbjct: 248 PRQALEALYVLSRFSQVVLCVHNPCQFYWADIISDRELLKAERKRGAAHPVLSQ------ 301 Query: 280 SENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESS-----------QELDAFVD 328 + + D NPLLA+WGK GRDYI LL + ++ Q++D F D Sbjct: 302 ------IDDPDQLHQHANPLLAAWGKQGRDYIRLLDEFDNPDDYRASFQTPGQKIDIFTD 355 Query: 329 V---TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQRE 385 LLH +Q+DI L R + D S+ FH H PQRE Sbjct: 356 HGDVDNPCLLHQLQNDIHNLTPLQE--------IRQQQRTVDLTRDHSVVFHDAHGPQRE 407 Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA--PADRYLPYAISDRR 443 VE+LHD+LLA DPTL PRD+IVMV DI+ Y+P IQAVFG R++P+ ISD+ Sbjct: 408 VEILHDQLLAAFNADPTLRPRDVIVMVPDINVYAPHIQAVFGRYSPGRKRHIPFTISDQG 467 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 R PVL A +L+SLP SRF ++++LL+V + RFDI+E+ + R+WV + IR Sbjct: 468 QRHHEPVLIALETLMSLPRSRFGVSEIISLLEVAGIRDRFDISEDDIPLARRWVEGANIR 527 Query: 504 WGIDDDNVRELELPAT-GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 WG+ + L+LPA ++TW+ GL MLLGY M W V PY E GL A L G Sbjct: 528 WGLHGKHRESLDLPAELERNTWQAGLRAMLLGYGMGD-DQPWGGVEPYGEIGGLQASLAG 586 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP-DAETEAAMTLIEQQWQAIIA 621 L + QL + L R EW + ML FF + + + +Q + + Sbjct: 587 RLGEFVHQLEALWQALQATRTPGEWEALFSAMLEQFFHKVEGQDLLLLNRFRRQLEQWLD 646 Query: 622 EGLGAQYGD-AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 + L A +PL++++D L Q LD+ ++QRFLAG VN TLMPMR+IPF+ VCLLGM Sbjct: 647 DALAAGLEQQPLPLNIVKDVLLQGLDEGGLNQRFLAGKVNFATLMPMRAIPFRKVCLLGM 706 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 NDG YPR P+ FDLM+Q + GDRSRR+DDRYLFLEAL+SA+++LYIS++GRSI+D+S Sbjct: 707 NDGDYPRSRPPVDFDLMAQDYRPGDRSRREDDRYLFLEALLSAREQLYISWVGRSIRDDS 766 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY------ 794 ER PSVL+ +L D++ + G + V LT H PF + Sbjct: 767 ERPPSVLISQLQDHLNSLWKVAGQPDGS-------VTKALTTQHPLQPFSRDYFPRTNGV 819 Query: 795 ---------------QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQR 839 Q +Y REW A + S T E + L L Sbjct: 820 GDGEETQPKPLADVLQARGLFTYEREWRSAHAVDNPEQSREAL-PYQTPEEPISLTELAN 878 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL-NALVEQDDAERL- 897 F P+ F+Q RLQV F + + D E F L GL R++++ +L+ +V+ E L Sbjct: 879 FLKKPIDTFYQRRLQVRFEAVEEDDTDNENFDLNGLDRWRLDNELIHEGVVKAASEEELH 938 Query: 898 ------FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQS-----MEIDLA 946 R GDL G + L R + + Sbjct: 939 ERLEATLDRMARRGDLGMGVTEHRLRTELAGRLPDLFQRYRGALAEWPEAVAEPLPFEFR 998 Query: 947 C----NGVQITGWLPQVQPDGLLRWR---------------PSLLSVAQGMQLWLEHLVY 987 V++ + ++ + + + A ++ WL HL Sbjct: 999 YSDSTGAVEVADLIDNLRCNPAGQLCRLVIASSGLLTGSGYSKKVRYANLLRDWLVHLAG 1058 Query: 988 CASGGNGESRLFLRKDGE-WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWL 1046 SG E+ + +++G +RFP +A EQA + ++ + E + L + E+G AW+ Sbjct: 1059 QLSGQPFETVILGKEEGRKFRFPVMAPEQAQKHFEAILGRWMEATTRTLPIHCEAGFAWI 1118 Query: 1047 KTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETME-AI 1105 + Y + ++A ++ QAY + D + + Sbjct: 1119 TSFYGGKKSVG-----DHERAISEAEQAY----STALDRDTGYLLGAFESPEALMASGEF 1169 Query: 1106 VEQSQRFLLPLFRFNQ 1121 + +PL+ Q Sbjct: 1170 EALLHQLYVPLWEAEQ 1185 >UniRef50_C1DMH2 Exodeoxyribonuclease V, gamma subunit n=18 Tax=Gammaproteobacteria RepID=C1DMH2_AZOVD Length = 1168 Score = 548 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 424/1178 (35%), Positives = 590/1178 (50%), Gaps = 91/1178 (7%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG--IAAN 59 L V H NRL+ L L + R L P E E++LVQS G+ QWL++ L+ + G IAA Sbjct: 11 LMVVHGNRLEALRELAVEWMRRHPLA-PLEDEVVLVQSNGIVQWLKLALAGRDGCGIAAA 69 Query: 60 IDFPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD 117 I LPA F+W + VL IP+ES +K ++W+LM LLP LLE E F LR +L D Sbjct: 70 IRVELPARFLWQSYRAVLGSAGIPRESPLDKAPLTWRLMRLLPNLLEGEAFAPLRRFLED 129 Query: 118 DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL--------VEGLGEAQAWQAPLW 169 DSD RK QL+ + ADLFDQY VYR DWLA W GH L EA WQ LW Sbjct: 130 DSDLRKRHQLAERLADLFDQYQVYRADWLADWAEGHDRLRTSRDGARPLDEAARWQPALW 189 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 +AL+ + RA ++ RF+E L PPGLP RV + GIS+LP L+AL A Sbjct: 190 RALLADVGRDTV-ATSRAGVHLRFVERLRGLDAPPPGLPRRVMVFGISSLPAQALEALAA 248 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L + ++ L NPCRY+WGDI L + R++R + ++ Sbjct: 249 LARFSQVLLCVHNPCRYHWGDIVPDQDLLRHQYRRQRR------------KDGMAPGLSA 296 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE-----------LDAFVD---VTPDNLL 335 + +PLLA+WGK GRDYI LL + + +D F + P +LL Sbjct: 297 EDLHQHAHPLLAAWGKQGRDYINLLDRYDDPEHYRERFASLGGRIDLFDEEDGPRPGHLL 356 Query: 336 HNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA 395 +Q DIL L E +R + D S+ FH+ HS QREVE+LHD+LLA Sbjct: 357 GQLQDDILHLRTL--------EETRKEWPLVDPKADRSLRFHIAHSAQREVEILHDQLLA 408 Query: 396 MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA--PADRYLPYAISDRRARQSHPVLEA 453 DP L PR++IVMV D+++Y+P IQAVFG DRY+P++++D+ R P+ A Sbjct: 409 RFAADPGLRPREVIVMVPDVNAYAPHIQAVFGQYARDDDRYIPFSLADQGQRGCDPLPIA 468 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 LL LP+ R +VL LLDVP L ARF I E L LR+W+ +GIRWG+D + Sbjct: 469 VEQLLKLPEGRLTVSEVLDLLDVPALRARFAIEESDLPTLRRWIEGAGIRWGLDAERRAG 528 Query: 514 LELPA-TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 L LPA Q+TWRFGL RMLLGYA+ S + P+DE GL A L+G L LL L+ Sbjct: 529 LGLPAGLEQNTWRFGLRRMLLGYAVGSGAPC-AGIEPFDEIGGLEAVLIGPLVRLLEALD 587 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT-LIEQQWQAIIAEGLGAQYGDA 631 R LA+ EW + + ML FFL +E + + + + + + G + Sbjct: 588 DLHRRLARPVAPAEWGRILQAMLGDFFLARSERDETLLGQLGEALEEWLELCAGVDLDEP 647 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 +PL ++R+ LD+ R+SQRFLAG VN CTLMPMR+IPF+VVCLLGMNDG YPR P Sbjct: 648 LPLGVVREAWLGLLDRGRLSQRFLAGAVNFCTLMPMRAIPFRVVCLLGMNDGDYPRSQTP 707 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 L FDLM+ + GDRSRR+DDRYL LEAL++A+++LY+S++GRS++DN ER SVLV +L Sbjct: 708 LDFDLMAGDYRPGDRSRREDDRYLLLEALLAAREQLYVSWVGRSVRDNCERPASVLVGQL 767 Query: 752 IDYIGQSHYLPG---DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP 808 D++ LP + + + + R+ A LT H PF + ++ + Sbjct: 768 RDHLASGWRLPEEYHEASDSEADKAKRLLAALTTEHPLQPFSRRYFEGDDALFSYAREWA 827 Query: 809 AASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTE 868 A + PF + LETLQ F PV+ FF RL+V+ D E Sbjct: 828 ALHRRDAPAGAARALPPFEPDGALALETLQNFLRDPVKHFFTQRLKVHLDESMQAQLDEE 887 Query: 869 PFILEGLSRYQINQQLLNALVEQDDAE---------RLFRRFRAAGDLPYGAFGEIFWET 919 PF L+GL +Q+ Q LL+A + + R + +G LP FGE E Sbjct: 888 PFGLDGLQLHQLRQSLLDAASLALEDDPARVEAALEAAALRLQRSGRLPLAGFGERLREQ 947 Query: 920 QCQEMQQLADRVIAC-----RQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSV 974 + + + R + + + GV++ GWL ++ + L Sbjct: 948 LLKPLPEQMRRYQSLCSLWSTRLESPKPLWFEHEGVELAGWLGGLRENAGGALARIELQP 1007 Query: 975 ---AQGMQLWLEHLVYC--------ASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQL 1023 +G W H + A+ G + L + +D F P+ +A L Sbjct: 1008 GELKRGKDDWKWHRLLRPWVAHVAAAACGAPLTSLLVGQDASLEFAPIEQARAQAILRLW 1067 Query: 1024 IEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRG 1083 +E +R G+ APL V + AWL ++ + D A +AYEG G Sbjct: 1068 LEAWRAGLEAPLPVALNTAIAWL--------NSGEEGDEEGGTAEKAAREAYEGGYNRSG 1119 Query: 1084 EGD-DIWYQRLWRQLTPETMEA-IVEQSQRFLLPLFRF 1119 E R + + E S+ L Sbjct: 1120 ELAGSASLARQYPTFDDLIADRDFYEWSRDLYQSLLDH 1157 >UniRef50_C6MAC3 Exodeoxyribonuclease V, gamma subunit n=3 Tax=Neisseriaceae RepID=C6MAC3_NEISI Length = 1068 Score = 548 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 331/1137 (29%), Positives = 527/1137 (46%), Gaps = 92/1137 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +Y SNRL+ L AL I L+ E I+VQS GM ++L + L+++ G+AAN+ Sbjct: 1 MFYLYQSNRLESLAALFAGIQRVRPLESALAAEQIVVQSQGMRRYLSVYLARELGVAANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLP--QLLEREDFTLLRHYLTD- 117 F LPA W + +++P+IP S F+ + M W+L+ L + +F +R L Sbjct: 61 QFSLPAGLTWQLMQKLIPDIPALSPFSPEVMRWRLLDLFRSERFQTTSEFENVRSILQSY 120 Query: 118 -DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYT 176 S + +QL+ + AD+FDQYLVYRP W+ W+ G L+ GLGE + WQA LW+ L + Sbjct: 121 LGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQEGKLL-GLGEDEVWQAQLWRYLDDGN 179 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 Q HR L+++ + +L+ LP R F+ GIS + P+YLQ LQ + +H ++ Sbjct: 180 ----QSAPHRVALWEKLLSSLDK-----AHLPERFFVFGISTMAPMYLQLLQKISEHCDV 230 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 + NP YWG++ + A L K + G Sbjct: 231 FVFALNPSGQYWGNVIEAAQLLK--------------------------GGDEADLSQTG 264 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 +PLLAS GK GRD+ L+++ +E F +V+ D LLH +Q+DI L Sbjct: 265 HPLLASLGKQGRDFFDFLTEI-GLEEQPVFEEVSDDTLLHCLQNDIQNLR---------- 313 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 S++ R D SI HSP RE+++L D+LL +L E P P DI V+ +I+ Sbjct: 314 --MPSEHSRADLLGDGSIRIVSAHSPLRELQILKDKLLRILHEHPDWQPHDIAVLTPNIE 371 Query: 417 SYSPFIQAVFGSA-PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 YSPFI+AVFG A + LPY++SD + + +L A L L +SRF + VL LL+ Sbjct: 372 PYSPFIEAVFGQAQGGAQALPYSVSDVKLSRRQSLLYALEQTLDLLESRFEVDKVLPLLE 431 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 ++ RF +T + L L V E + WG+D A TW+ L R++LG+ Sbjct: 432 SGLVLRRFGLTADDLPLLHDTVAELNVHWGLDGTMRG----AADNLFTWQQALERIVLGW 487 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 + + ++ G A+ + L+ + EEW CRD++ Sbjct: 488 MLPDDGSPLWQNVSAWHGDVNRLDVFGRFAAFIRTLSRLAAEWRKPASAEEWTERCRDLV 547 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 + FLPDA+ + A+ EQ E A + +P + + + L E FL Sbjct: 548 QSLFLPDADDQYALQQFEQALAKWQEETALAGFSGTLPQHTVIRHIRRFLGSES-QAGFL 606 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 G + C+++PMRS+PFKV+CLLG+NDG +PR FDL+++ P++GDR+RRDDDRYL Sbjct: 607 RGGITFCSMVPMRSLPFKVICLLGLNDGDFPRNTKAAVFDLIAKHPQKGDRARRDDDRYL 666 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 FLEA+ISA+ LY+SY+GRSI+++ E PS LV ELID I Sbjct: 667 FLEAIISARDILYLSYVGRSIRNDDELAPSALVSELIDTIAAMTGRRSKG---------- 716 Query: 776 VKAHLTCLHTRMPFDPQNY----QPGERQSYAREWLPAASQAGKAHSEF--VQPLPFTLP 829 + H H PF + + + S +++ A ++ + F T Sbjct: 717 LAEHWVEQHPLQPFSHRYFIADNISDDLFSTRQDYAEALNRPREQARPFFSEALEENTPV 776 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV 889 TV + RFW +PV+A+ Q L D EPF + + I L+A Sbjct: 777 PTVWQDDFIRFWKNPVKAWLQQTLGWREPYRDEAWESAEPFEPQRADK--IAAAYLDARR 834 Query: 890 EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG 949 D + R A LP G G+++ + +++ ++ ++ +G Sbjct: 835 HNQDFQETAVRLDAESLLPAGELGKLWQQNFQAAAKRIDGALLQS-PKLPPFAYEVPFDG 893 Query: 950 VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGG---NGESRLFLRKDGEW 1006 + G L + G + + + Q + L LEHL++CA G ++ + Sbjct: 894 QTLQGSLGNLYQCGQVFYLDRKPNAPQRIALLLEHLIFCAVGSSETETRQTHIVQPEETT 953 Query: 1007 RFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQK 1066 +P + + QA L + + + G + PL ++ A + Q + + Sbjct: 954 LYPEIPSSQAQEMLQKWLAFFNLGQTRPLPFFAKTSLAAAEAYGKKQ---------SWED 1004 Query: 1067 ARTKFLQAYEGNMMVRGEGDDIWYQRLWR--QLTPETMEAIVEQSQRFLLPLFRFNQ 1121 K ++Y GN + +G+ D ++ P + L+PL + Sbjct: 1005 TLNKARESYHGNKVSKGQKDYTEVALVFGNEDTEPVEGALFQRLVEELLIPLLDAVK 1061 >UniRef50_C7LVF8 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVF8_DESBD Length = 1064 Score = 543 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 340/1133 (30%), Positives = 536/1133 (47%), Gaps = 93/1133 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 ++ SNRL+ L L+ +++ DP EPE ILVQS GM +W+ M L+++ G+ AN Sbjct: 4 FLLHASNRLENLAELLAEVLKT--PLDPMEPETILVQSGGMQRWVSMQLARRHGVCANTR 61 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 FP P F + + + ++P+E +++ M W++ LL LL+ +F L Y+ +D + Sbjct: 62 FPFPVGFAYALCRELRADLPREYPLSQERMLWRITHLLRGLLDEPEFAPLARYVQED-SE 120 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGL-----GEAQAWQAPLWKALVEYT 176 + QL+ + A FDQYL++RP+W A+WE ++AWQA LW+ L+ Sbjct: 121 LRSVQLAERIAYHFDQYLIFRPEWAARWENHEPSGNFLLPGHVASEAWQARLWRELIRDM 180 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 HRA L +R I +LE T+ P LPSRV + GI LPPVYL L+AL +H ++ Sbjct: 181 GG-----EHRAALLRRAIASLEKGTSLP-DLPSRVCVFGIPTLPPVYLDLLKALSRHSQV 234 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 H+ +PC+ YWGD+ + S E E + Sbjct: 235 HVFLLSPCQKYWGDLLTHRERRRAYRAGEHASPERPEDAMP------------------- 275 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 LA G +G++++ LL + + + E + + D +L +Q+D+L+L+ R Sbjct: 276 ---LAGLGAVGKEFLELLMERD-ALETGLYEEPVGDTMLGQLQADLLDLDVREEKTDF-- 329 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 D+SI H CHSP RE+E+L D +L +L +D +L+P+DI+VM DI+ Sbjct: 330 -------------SDTSIQVHCCHSPLREMEILKDLILDLLAKDTSLSPQDILVMNPDIE 376 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y+P IQAVFG+A D +P++ISDR+ ++ + F+ LL RF + V ALL+ Sbjct: 377 RYAPVIQAVFGTAGED-GIPFSISDRKPTKAAETIRLFLELLEFGQHRFEASRVCALLEA 435 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + R + + + +WV SG+RWG+D D R+ L GQ+TW GL+R+ LGY Sbjct: 436 PPVRQRLGLDASDTQRVLEWVRASGVRWGLDLDFRRKAGLGDFGQNTWESGLSRLYLGYM 495 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 +A + P EL+G + + + +L L R +W +L+ Sbjct: 496 TGAADPL-GGIAPLALRGSAEQELLGRVTAWIDELATLWSRLRDTRTPADWQDCLLWILD 554 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 AFF D + I + + + + L + +RLD+ FLA Sbjct: 555 AFFPQDPAQAEHLLAIRKAVTDLTRDMGDFEADARTMLY----LIRKRLDESGGESGFLA 610 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 + C L PMRSIPF+V+CL G+ +PRQ PLGFDLM+ +P+ GDRS R+DDRYLF Sbjct: 611 SGLTFCGLKPMRSIPFRVICLTGLTSTAFPRQDIPLGFDLMAARPRPGDRSHREDDRYLF 670 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 LE++ISA+ L ++Y G S DN E PSVLV EL+D++ + + G Sbjct: 671 LESIISARDNLILTYPGLSQSDNLEAPPSVLVSELLDFLDRGCTVDG----------LTP 720 Query: 777 KAHLTCLHTRMPFDPQNYQPGE-RQSYAREWLPAASQAGKAHSEF--------VQPLPFT 827 + H F P + G SY+ + AA H ++ Sbjct: 721 SEAIVFKHKLQAFHPDYFSAGSPIFSYSAQNRDAAQALFAEHQSRQFFPEASTLEGAHAE 780 Query: 828 LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI-LEGLSRYQINQQLLN 886 + +E L RF HP R + L+++ + + D EP GL Y Q LL Sbjct: 781 QEIEIDIEELTRFLTHPCRHLLRA-LRIDPTGGEDDFLDEEPLATPTGLEAYGPLQDLLR 839 Query: 887 ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEID-- 944 +++ A L A LP G G C +++ LAD+ A + + +D Sbjct: 840 TALDE-PAANLEGLLLAWQLLPPGQAGTDASRKLCSQIRALADQARAVIGDEKPLRLDLK 898 Query: 945 LACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDG 1004 L + +TG + + D + RP+ + ++LW+ HL A+G +S D Sbjct: 899 LPLGRITLTGRID-LHGDRFVTCRPAKTKSSDMLRLWVRHLAASATGHAVQSMHIGTDD- 956 Query: 1005 EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTL 1064 FP A A + L L+ Y GM AP+ + P + A+ + + + + Sbjct: 957 --CFPAPEAPNARNLLEGLLRLYTRGMRAPIHLFPRTSLAFAEARFTGRKPKERPE---- 1010 Query: 1065 QKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLF 1117 A + ++ +EG MV E DD L+R P E + ++ P+ Sbjct: 1011 --ALMQAMRQWEGGYMVSPERDDPHLAFLFRDTEP-DWERFADVAEEIYGPIL 1060 >UniRef50_A1KVC5 Exodeoxyribonuclease V n=23 Tax=Neisseria RepID=A1KVC5_NEIMF Length = 1069 Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats. Identities = 334/1138 (29%), Positives = 522/1138 (45%), Gaps = 93/1138 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +Y SNRL+ L AL I + + L +PE I+VQS GM ++L L++ G+AAN+ Sbjct: 1 MFYLYQSNRLETLAALFARIQKVKPLKSALQPEQIIVQSQGMRRYLNTCLARDLGVAANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQ--LLEREDFTLLRHYLTD- 117 F LPA W + +++P IP+ S F + M W+L+ L +F +R+ L D Sbjct: 61 SFSLPAGLTWKLMKKLIPGIPELSPFAPEVMRWRLLDLFRSEAFRNTAEFEDVRNVLQDY 120 Query: 118 -DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYT 176 S + +QL+ + AD+FDQYLVYRP W+ W+ G + GLG+ + WQ+ LW+ L + Sbjct: 121 LGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRRL-GLGDDEIWQSKLWRYLDD-- 177 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 Q HR L+++ + L+ LP R F+ GIS + P+YLQ L L +H ++ Sbjct: 178 --GRQSAPHRVALWEKLLAALDK-----DKLPERYFVFGISTMAPMYLQLLHKLSEHCDV 230 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 + NP YWG++ + A + K G Sbjct: 231 FVFALNPSGMYWGNVIEAAQILK--------------------------GGGDPDLTQAG 264 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 +PLLAS GK GRD+ L+++E E F + D LLH +Q+DI L+ + ++ Sbjct: 265 HPLLASLGKQGRDFFDFLNEMEIEGETPVFEEGGRDTLLHALQTDIQNLKMPSENVGSVN 324 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 D SI HSP RE+++L D+LL +L E P P DI V+ I+ Sbjct: 325 ------------TGDGSIRIVSAHSPLRELQILKDKLLKILHEHPDWQPHDIAVLTPHIE 372 Query: 417 SYSPFIQAVFGSAP-ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 SY+PFI+AVFG A + LPY++SD + + P+ A L L +SRF + VL LL+ Sbjct: 373 SYTPFIEAVFGQAQPGAQALPYSVSDVKISRRQPLFHALSCLFDLLESRFEVDKVLVLLE 432 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 + RF +TE+ L L V + + WG+D + TW+ + RM+LG+ Sbjct: 433 TAPVLRRFGLTEDDLPLLHDMVADLNVHWGLDGEMRG----GTDQLFTWKQAVERMILGW 488 Query: 536 AMES-AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 + WQ V + A L G A+LL L+ R Q + EW+ CRD+ Sbjct: 489 MLPEGGNPMWQDVSAWYADVNQTA-LFGRFAALLETLSDIVRIWRQPATIGEWVARCRDL 547 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 L F +A+ + ++ +E +W AE AQ+ +P + + + LD E F Sbjct: 548 LETLFQAEADDQKSVQNLENEWVKWQAETELAQFSGQLPQQTVIRHIRRFLDSES-EAGF 606 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 L G + C+++PMRS+PFKV+CLLG+NDG +PR FDL+++ P +GDR+RRDDDRY Sbjct: 607 LRGGITFCSMVPMRSLPFKVICLLGLNDGDFPRNTKAAVFDLIAKHPAKGDRARRDDDRY 666 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 LFLEALISA++ LY+SYIGR I+ + E PS L+ ELID + + Sbjct: 667 LFLEALISAREILYLSYIGRDIRKDEELAPSSLLGELIDTVAAMAGI----------GSR 716 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE---- 830 ++ + H F + +Q G R + A E QP E Sbjct: 717 QLAQNWIEQHPLQAFSRRYFQEGGRSDGIFGTRTDYATALGQTPEPPQPFFDQPVENAEP 776 Query: 831 --TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 + + RFW +PV+ + Q +L + EPF + QI + + A Sbjct: 777 VAEIGQDEFIRFWRNPVKVWLQQQLAWSEPHIGEAWEPAEPFEPQHAD--QIAETYIEAR 834 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN 948 E D + R A LP G G ++ + Q + D + + + + Sbjct: 835 REGRDFAQTAARIGAESLLPSGELGRLWQQNF-QTAAKQIDTAVLNSPKLPPLSYAIPSD 893 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCA---SGGNGESRLFLRKDGE 1005 G + G L + G + + + Q + LEHL++CA S ++ Sbjct: 894 GQILKGSLGNLYRCGQVFYAYGKPNAPQRIAFLLEHLIFCAVMPSEAETRQTFIVQSGET 953 Query: 1006 WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQ 1065 +A ++AL LS+ + + G + PL ++ A + Q+ + Sbjct: 954 EILAEIAQDRALQLLSEWMAFFNIGQNRPLPFFAKTSLAAAEAFAQKQD---------WE 1004 Query: 1066 KARTKFLQAYEGNMMVRGEGDDIWYQRLWRQL--TPETMEAIVEQSQRFLLPLFRFNQ 1121 A K AY GN + +G+ D ++ P ++ L + Sbjct: 1005 AALKKAQTAYYGNKVSKGQKDYTEVALVFGNASQNPLEQPLFENLARLLADTLAAAEK 1062 >UniRef50_D0KY94 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KY94_HALNC Length = 1183 Score = 541 bits (1392), Expect = e-152, Method: Composition-based stats. Identities = 349/1206 (28%), Positives = 548/1206 (45%), Gaps = 123/1206 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-------F 54 + NRL++L+ ++ ++R L P E E LVQS GMAQWL++ L++ Sbjct: 15 FLLIQGNRLELLQQVLIDWLKRHPLA-PLENETFLVQSNGMAQWLRLGLARPRSAQDGGL 73 Query: 55 GIAANIDFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLR 112 GIA I+ LPA W + VL +P E+ +K + W+LM LLP L+ F LR Sbjct: 74 GIATGIEMILPARLQWQCYRAVLGTDFVPAEAPLDKDKLVWRLMRLLPNLIHTPSFLPLR 133 Query: 113 HYL--TDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV-----EGLGEAQAWQ 165 HY+ D R+L+QL+ + AD FDQY VYR DWL W+ GH L + Q WQ Sbjct: 134 HYIVTDQRPDDRRLYQLALRVADQFDQYQVYRADWLRHWQEGHDDLPAHETRLPDEQRWQ 193 Query: 166 APLWKALVEYTHQLGQP------RWHRANLYQRFIETLESATTCPPGLPSRVFICGISAL 219 PLW+AL+ + RA+L+ F + P GLP R+ + G+S++ Sbjct: 194 PPLWRALLADIRERQDDRDGIEFAAGRADLHTAFRKAASEQKARPEGLPRRIVVFGLSSI 253 Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 P L L + ++ + F NPC YYWGDI D L Sbjct: 254 APQVLDVLAVASRWSQVIVCFLNPCEYYWGDIIDGHQLFAQR------------------ 295 Query: 280 SENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQEL---DAFVDVTPDNLLH 336 + ++ E +PLLA+WG+ GRD + LL E + +L + ++ Sbjct: 296 YQGRRPYKSAPNETAHAHPLLAAWGRQGRDLMRLLDQFEENAQLAANPLTLTPFESTVVD 355 Query: 337 NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 + +S +L L + + + R+ N+R D S+ FH+ HSP REVE+LHD+LLA Sbjct: 356 SAKSSLLTLIQDDILKLRTPDELRALNRRLEPDQDHSLHFHIAHSPLREVEILHDQLLAA 415 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD--RYLPYAISDRRARQSHPVLEAF 454 E D +L P DIIVMV D+ Y+P I A+FG D +++P++ISD+ A ++ A Sbjct: 416 FEADTSLKPTDIIVMVPDMSLYAPAISAIFGRFGRDDPQHIPFSISDQAASGQVALINAL 475 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 +L+LP SR + ++L LL P+L ARF I+E L L W++ +GIRWG++ + Sbjct: 476 EQILNLPTSRLLRSELLDLLGSPLLLARFGISETDLTTLHDWIDSAGIRWGLNAQHREAF 535 Query: 515 E-LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 P Q+TW FGL R+LLGY W + P+ G+ AELVG LA L+ QL+ Sbjct: 536 GVPPGMEQNTWAFGLNRLLLGYLSGDENAIWDEIEPHPVMDGISAELVGKLAQLVQQLDK 595 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFL-----------PDAETEAAMTLIEQQWQAIIAE 622 + + L+++ EW+ R ++ FF + + + + +A+ Sbjct: 596 YTQRLSEKCTPTEWVARLRRLMTDFFSLSDTQNHLDSPEIQIEMDTLARLHNELERWLAD 655 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 A + + + + +R RL+ R+ QRF+ G VN TLMPMR+IP++ + LLGM+D Sbjct: 656 CSVAGFENEIDIETVRHAWLNRLEPHRLHQRFIVGGVNFATLMPMRAIPYRHIYLLGMDD 715 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 YPR+ P FDLM+ + + GDR+RR+DDRYLFLEAL++A+++L IS++GR+I +N R Sbjct: 716 ANYPRRQTPNDFDLMNGRYRPGDRARREDDRYLFLEALLAARERLSISWVGRNINNNKIR 775 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 SVLV +L DY+ Q +P + + + T H PF + + + Sbjct: 776 PASVLVSQLRDYLDQFWAVPEPHSCSEIQ---------TTEHPLHPFSRRYFSADNTDLF 826 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 A + + + E + L TL F P R V R + Sbjct: 827 TFANDWRAVHDSTQGTSKTELPIWLPKEPLTLNTLSDFLRTPAHTLLTKRFGVYLRPTAT 886 Query: 863 EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL---------FRRFRAAGDLPYGAFG 913 E+ D EPF L+GL R+Q+ +++ + + Q + A YG Sbjct: 887 ELEDHEPFELDGLQRWQLKKEINDRVRHQLAIQAHATSQMTTPTIEHISALISTQYGQAR 946 Query: 914 EIFW------ETQCQEMQQLADRVIACRQPGQSMEID---------LACNGVQITGWLPQ 958 + E+ L D+ + + G+ + +P Sbjct: 947 LGGRLPIVSPAFEYSELLPLIDQWQRWLELNLRFHQTAAKSPVLSIRSDRGIMLEASVPD 1006 Query: 959 VQPDGL---------------LRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKD 1003 V R + + + W HL+ + G+ E+ L + Sbjct: 1007 VYSTESSIPNDTLARLIFIEGKLHRGQDIEWHKCVAQWPAHLLAQLTHGSVETYLI-GET 1065 Query: 1004 GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDST 1063 G F P+ E A +L L++ + + + AP + ++ L +N Sbjct: 1066 GTLCFTPIEKEMAKQHLLTLLDAWFDAVQAPYPLACKTAFCLLAQEMTPEN--------- 1116 Query: 1064 LQKARTKFLQAYEGNMMVRGEGDD-IWYQRLWRQLTPET------MEAIVEQSQRFLLPL 1116 A K + +EGNM V GE + RLW + + E SQ P+ Sbjct: 1117 TDSALKKARECFEGNMKVPGEVTNSPALARLWPDFSTLINGQSFAKKQFTELSQIIYAPI 1176 Query: 1117 FRFNQS 1122 ++ Sbjct: 1177 KDAIEA 1182 >UniRef50_C5S7Q0 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7Q0_CHRVI Length = 1200 Score = 538 bits (1385), Expect = e-151, Method: Composition-based stats. Identities = 392/1217 (32%), Positives = 566/1217 (46%), Gaps = 140/1217 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-------- 53 + NRL+ L L+ + R L P E E ILVQS G+AQWL++ L+ Sbjct: 16 FMLIQGNRLEELRGLLVAWMHRHPLA-PLENETILVQSNGIAQWLKLALAATPTSDDRDA 74 Query: 54 ----FGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLER---- 105 GIAA +D LPA FIW ++ VL ++P+ S F+K ++W+L LL +L Sbjct: 75 ITGGQGIAAALDVMLPARFIWRVYRAVLGDLPETSPFDKAPLTWRLYRLLERLTGVAPLQ 134 Query: 106 ------EDFTLLRHYLTDDSDK---RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV- 155 + LR +L D + R+ +QL+ + ADLFDQY VYR DWL W G V Sbjct: 135 SSDTRFDALDPLRGFLAVDGQEAAPRRRYQLAERLADLFDQYQVYRADWLEAWSQGRDVL 194 Query: 156 -------EGLGEAQAWQAPLWKALVEY------THQLGQPRWHRANLYQRFIETLESATT 202 + Q WQ LW+AL RA +++ F+E + Sbjct: 195 IRPNGERRSIPVGQDWQPVLWRALQADVDAEHGPDDPPLRHASRAEVHRVFLERTRAGQD 254 Query: 203 CPP---------GLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKD 253 P LP RV + G+S+LP L+AL+A+ ++ L NPCR+YWGDI + Sbjct: 255 ADPTRIAALRSVELPRRVIVFGLSSLPRQMLEALEAIAPVCQVMLFVLNPCRHYWGDIIE 314 Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 L + R++ + + G+PLLA+WGK GRDYI L Sbjct: 315 GRDLFRHPYRRQTA-------------RKVPENLDESRLHLNGHPLLAAWGKQGRDYIRL 361 Query: 314 LSDLES--------------SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 L + + Q +D F +LLH +Q DILEL Sbjct: 362 LDEQDERRRYEAYFQGLTARDQGIDLFASPGTGSLLHQLQDDILELRPL--------HER 413 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE----DPTLTPRDIIVMVADI 415 + D S+ F V HSPQRE+E+LHDRLL E D L PR+++VMV DI Sbjct: 414 QDQRTVIDPEHDRSLEFIVAHSPQREIEILHDRLLDAFERSARTDRPLQPREVLVMVPDI 473 Query: 416 DSYSPFIQAVFGSAP--ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 ++P IQAVFG R +P+ I+D+ R +P++ LL+LP +RF ++L L Sbjct: 474 AVHAPHIQAVFGRFDPDDRRAIPFQITDQGQRHRNPLVIGLEHLLNLPRARFAVSELLDL 533 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA-TGQHTWRFGLTRML 532 LD+P L RF + E L LR W+ + +RWG+D L LP Q+TWRFGL R+L Sbjct: 534 LDIPALRTRFSLDEPDLPRLRLWIAGANVRWGLDAAQRASLGLPEGLEQNTWRFGLRRLL 593 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 LG+A G W+ + P+DE GL A L+G LA LL +L + + L + R W + Sbjct: 594 LGFASGD-AGPWRDIEPHDEVGGLEAALLGPLAQLLERLEAYWQCLTEPRTPAGWSALIS 652 Query: 593 DMLNAFFLPDAETEA-AMTLIEQQWQAIIAEGLGAQ-YGDAVPLSLLRDELAQRLDQERI 650 +L+ FF+ +E++ + I + A A+ + + + L ++RD L RLD+ + Sbjct: 653 ALLDDFFMETSESDGVTLARILLELDAWEADCVQGGLGAEPIALEIVRDSLLARLDRPSL 712 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 +QRFL G VN TLMPMR+IPF+ + LLGMNDG YPR+ P FDLM+ + GDRSRR+ Sbjct: 713 TQRFLGGAVNFATLMPMRAIPFRQIWLLGMNDGDYPRRRVPADFDLMAGDYRPGDRSRRE 772 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 DDRYLFLEAL+SA++KL I ++GR I+DNSER PSVLV +L D++ P Sbjct: 773 DDRYLFLEALLSAREKLVIGWVGRGIRDNSERPPSVLVGQLRDHLAAGWRRPDG------ 826 Query: 771 ESEARVKAHLTCLHTRMPFDPQNYQPGE---RQSYAREWLPAASQAGKAHSEFVQPLPFT 827 AR+ A LT +H PF ++PG +YAREW AG + P+ Sbjct: 827 -DGARLLAALTSVHPLQPFGRGYFEPGRAKTLFTYAREWRAVHDGAGTTEVSAERLAPWL 885 Query: 828 LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNA 887 V L+ LQ F P+ A F RL++ E PD E F L+GL +QI +L++ Sbjct: 886 PETPVDLDQLQGFLRDPIMALFDQRLRIKAPGEVVAPPDVETFALDGLGDWQIKDELISR 945 Query: 888 LVE--------QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ 939 E + + RF+A G LP G+ GE T + L A Sbjct: 946 TFEPGLDRPALEQRLQAGIARFQAQGRLPDGSLGERLGRTVIAYLPVLHAAWDAALSEWP 1005 Query: 940 S---------MEIDLACNGVQITGWLPQVQPDGLLRWRPS----------LLSVAQGMQL 980 +E+++ + + L ++ R + ++ Sbjct: 1006 RRLDRPIPVMVEVNVPAGRLVLEDVLSDLREGDDGRGQIILQTSGLTKDKHYQWRNTLRA 1065 Query: 981 WLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPE 1040 W+ HL G + L G+ R P+ ++A L L+ + EGM PL V Sbjct: 1066 WVRHLAAQ-LDGEPVTTRLLTPSGDARLEPVPVDEARERLEALLVVWWEGMQRPLPVALN 1124 Query: 1041 SGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPE 1100 +G AWL D KA LQA++ + + + R + Sbjct: 1125 AGMAWLDK--DGPETLEDGTAPEELKAWNAALQAFDLDHTY-----NAYVGRCYDSFEAL 1177 Query: 1101 TME-AIVEQSQRFLLPL 1116 + R L Sbjct: 1178 WSGVEFARWAHRLYGGL 1194 >UniRef50_A4VRQ6 Exodeoxyribonuclease V gamma chain n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VRQ6_PSEU5 Length = 1092 Score = 536 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 380/1143 (33%), Positives = 561/1143 (49%), Gaps = 84/1143 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +YH+ L+ L + + + L DPF P ++V S GM +WL + L+++ GIA + Sbjct: 1 MLSLYHAPDLETLGE-LATTLLAQPLADPFAPARVVVPSQGMGRWLTLELARRQGIAMQL 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 + LPA+F+WD+ VL +P++SAF+ +++W+L L + E L YL D D Sbjct: 60 ELQLPAAFVWDLSRTVLGSLPEQSAFSPTTLTWRLYGWLCEPANLELAPRLAQYL-DGGD 118 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 +R+ L++K AD+FDQYL+YR DWLA WE G ++ LG +AWQA LW+ L + H Sbjct: 119 ERRRLSLAAKIADVFDQYLLYRDDWLAAWERGETLD-LGPDEAWQALLWRELTKDGHP-- 175 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 HRA L ++ L P LP R+ + GIS+LPP +L+ L L +HI++ + Sbjct: 176 ----HRARLLGDLLQRLYRDEPLP-DLPERLLVFGISSLPPHHLRVLDGLARHIDVVVCA 230 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NP R WG+I+D LA+ D DVG+PLL Sbjct: 231 LNPSREAWGEIRDIRELARQPE-----------------------SGVDDWYLDVGHPLL 267 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAF------VDVTPDNLLHNIQSDILELENRAVAGVN 354 AS GK GRD+ L L +S+ F D+ D+LLH +Q+DIL L R Sbjct: 268 ASLGKQGRDFFDSLFSLTASEGSQEFGLYSEDEDLHDDSLLHALQNDILRLRTRLPD--- 324 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 + L D S+ H+ HSP REVE+LHD+LLA DP LTP ++V+ D Sbjct: 325 --------ERISLAENDRSLEVHIAHSPLREVEILHDQLLARFAADPALTPDQVVVLTPD 376 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 I+ Y+PFI+AVF +PY+++DR R P++EAF+ LL L SRF +E++LA L Sbjct: 377 IERYAPFIEAVFAPREGSPRIPYSLADRSLRAEVPLIEAFLELLLLAQSRFAAEEILAWL 436 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + P +A R I E L LR W+ E+G+RWG D + L LPA TWR GL R+LLG Sbjct: 437 EQPAIARRAGIESEDLPLLRDWLREAGVRWGRDGEQRARLGLPAEPAFTWRQGLDRLLLG 496 Query: 535 YAME-----SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 +A P D G +L+G L + +L LA+ RPL EW Sbjct: 497 FAAPPQLAGDRAPLLGEHWPLDALEGARGQLLGRLVGFVERLGSLADQLARPRPLAEWAD 556 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 + +++ F + E + L+ Q A+ + A + L L+ +L+ L Q Sbjct: 557 DLQVLIDTLFD-EREAGETLLLLSQACAALRDQAQAADLTRPIELELVHQQLSAALQQGG 615 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 + FL G V CT++PMRS+PF+VVCLLG++DG +PR+ P GFDL+ + P+RGDR+RR Sbjct: 616 GASGFLTGAVTFCTMVPMRSLPFRVVCLLGLDDGAFPRRTPPSGFDLIGRHPRRGDRARR 675 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 DDRYL LE L+SA+Q LY+SY+GR +DN+ PSVL+ E+++ + D Sbjct: 676 LDDRYLLLETLLSARQALYLSYVGRDPRDNAVLPPSVLLSEVLEAV--------DMTAVL 727 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP 829 + V + H PF P+N+ Y+ W AA + + QP L Sbjct: 728 ADGARPVSQKILIAHPLQPFSPRNFGEAPCAGYSLPWFRAAQRLAEPPQAQAQPFASLLA 787 Query: 830 ET------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 E + L + + HP R + RL + + + EPF LE + + + Sbjct: 788 EPDEAWLTIEPSQLLQCFRHPARFLLEQRLGLRLADDQESLASDEPFDLEMPAWNGLRRL 847 Query: 884 LLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ--PGQSM 941 L A+ ++ E R AAG LP G G+ W ++ A R+ R + + Sbjct: 848 SLQAMEQRWSDEEERRMACAAGWLPTGELGQALWGKLRGPVRAFAPRLFELRPDAVPEPL 907 Query: 942 EIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV--YCASGGNGESRLF 999 +D+ GV++ GWL V P GL W+ L WL HL+ CA+ G L Sbjct: 908 PVDINLAGVRVHGWLDGVTPGGLFGWKLGRLGEWDLPPFWLRHLLLNLCATPGIERHSLM 967 Query: 1000 LRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLD 1059 L G+W+ PL A L + YR + PL +LP S A+ + + Sbjct: 968 LSPAGDWQLGPL--ANAAELLEPWLVAYRSAIREPLPLLPRSSQAFARGYRKPSRGSEPL 1025 Query: 1060 DDSTLQKARTKFLQAYEGNMMVR--GEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLF 1117 D AR + +A+ G E +D W +R P E +++ + P Sbjct: 1026 D-----CARKRAREAWFGAEFSPIAAEAEDPWNALAFRDSDPL-DERFETLAEQLIGPAL 1079 Query: 1118 RFN 1120 Sbjct: 1080 DAL 1082 >UniRef50_Q5QUQ7 Exonuclease V gamma subunit n=2 Tax=Idiomarina RepID=Q5QUQ7_IDILO Length = 1155 Score = 535 bits (1377), Expect = e-150, Method: Composition-based stats. Identities = 375/1180 (31%), Positives = 556/1180 (47%), Gaps = 107/1180 (9%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 V H +RL+ L + + L P E E +LVQS G+AQWL++ L+Q GIAA ID Sbjct: 8 FIVAHGHRLEDLTDVAVTFTQNYPLA-PLEQETVLVQSNGIAQWLKINLAQASGIAAMID 66 Query: 62 FPLPASFIWDMFVRVLPE-IPKESAFNKQSMSWKLMTLLPQLLER-EDFTLLRHYLTDDS 119 LPA F W + VL + IPK S F+K ++W+LM LLP+L+E F L+HY +DDS Sbjct: 67 VTLPARFQWKAYRAVLGDDIPKTSPFDKDRLTWRLMRLLPELIEHNPHFAPLKHYTSDDS 126 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL----VEGLGEAQAWQAPLWKALVEY 175 D RKL+QLS + ADLFDQY VYR DWL W G + + + Q WQ LW+A+ Sbjct: 127 DGRKLYQLSGRLADLFDQYAVYRADWLDNWVRGQDMLEQEQPVEDEQLWQPELWRAVSND 186 Query: 176 THQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIE 235 +RA L+QRFI+T ++ T P GLP RV + GIS+LP LQ L A+ + + Sbjct: 187 IGIDD-YWNNRAELHQRFIDTAQALTERPAGLPPRVVVFGISSLPQQMLQVLDAIKGYTQ 245 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 I L NP +Y+W DI D + + + N D + Sbjct: 246 ILLCVHNPSQYHWADIVDGKEALRQA---------VKASSRLKHKPELPDDPNDDELHQL 296 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQE---------LDAFVDVTPDNLLHNIQSDILELE 346 +PLLASWGK GRDYI LL + + L+ F D+LL +Q DIL L Sbjct: 297 AHPLLASWGKQGRDYIRLLDLYDETLAKQEAFNTIKLELFEPHNTDHLLAQLQDDILNLR 356 Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 + + D S+ FHVCHSPQRE+EVLHD+LL +DP L PR Sbjct: 357 PVQET---------RELWPTPNTADKSLQFHVCHSPQRELEVLHDQLLDAFAKDPELKPR 407 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRY------LPYAISDRRARQSHPVLEAFISLLSL 460 D++VM+ D+++Y+P+I AVFG +PY I+D+ R P++ A LL + Sbjct: 408 DVMVMLPDVNTYAPYIDAVFGRYHNRFGERDPRAIPYTIADQGERHQRPLMIALELLLQV 467 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 RF D+ LL VP + RFD++++ L L++WV E+G RWG++ + + +PA Sbjct: 468 DQLRFTQTDLFNLLSVPAVQQRFDMSDDDLPQLKRWVKEAGARWGLNAEQRAQFYMPAAE 527 Query: 521 Q-HTWRFGLTRMLLGYAMES-------AQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 + ++W FGL RM+ GYAM W +V PY E +GL A LVG LA ++ L Sbjct: 528 ETNSWWFGLKRMIAGYAMGDLADVNLENDSPWANVEPYTEVAGLSAALVGCLADVVRTLE 587 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM-TLIEQQWQAIIAEGLGAQYGDA 631 W + E L EW+ +L FF + +++ + + + + + A Sbjct: 588 QWWQRAQGEHSLPEWVTQGEWLLEQFFEAEEDSDRLLLAKLSDELYQLRDICVEADNESQ 647 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 + L + +D +R+DQ+ ++QRFLAG VN TLMPMR+IPFK VC+LGMN+ YPR Sbjct: 648 LRLPIFKDAWLERVDQQNLNQRFLAGAVNFATLMPMRAIPFKYVCVLGMNESDYPRSTPR 707 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 + FDLM+ + + GDRSRRDDDRYLFLEA++SA+ Y+S++G S +DNSER PSVLV +L Sbjct: 708 VDFDLMTDRYRPGDRSRRDDDRYLFLEAMLSARDCFYLSWVGYSAKDNSERTPSVLVAQL 767 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY--QPGERQSYAREWLPA 809 D++ Q + LT +H PF+P + + + +YA EW A Sbjct: 768 RDHLQQGWEVD--------------INSLTVVHKLQPFNPYYFNQEDSDYFTYASEWAQA 813 Query: 810 ASQAGKAHSEFV--QPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 A + S L T+ + ++RF P R +F RL F ++ D+ Sbjct: 814 HQGAVASTSRTASETAADDELERTLSINDIKRFIEEPARLYFNWRLDTYFSRNSEDLDDS 873 Query: 868 EPFILEGLSRYQINQQLLN----ALVEQDDAER----LFRRFRAAGDLPYGAFGEIFWET 919 E F+++ L + + +L++ AL+ E R + G L GA E Sbjct: 874 EAFVMDNLQSWSLTTRLVDAGKKALLNGAGIEASLLKELNRIKREGALGIGAIAEQNGLQ 933 Query: 920 QCQEMQQLADRVIACRQPGQSM-----EIDLACNGVQITGWLPQVQPDGLLRWRPSLLSV 974 ++ Q++ + + + +G+ I + + + + S Sbjct: 934 LLEQSQEILETYQQSIAGYSGVNEFPETVFFEHSGLTIDDTVTGLHSNENGERLWVVTSA 993 Query: 975 AQGMQ---------LWLEHLVYC-----ASGGNGESRLFLRKDGE-WRFPPLAAEQALHY 1019 + W Y + L + K G + P+ AE A+ Sbjct: 994 SNIAAKNGKGINSGGWKHASAYYLGLLLLNLQKPTRLLIVSKGGCQLQVAPVPAELAVQQ 1053 Query: 1020 LSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNM 1079 L Q++E P + + G WL D L + Q YE + Sbjct: 1054 LEQILELVALSAQQPQPMHLDVGMTWLSAMDKNSQDEALAHE--------AARQKYEEDG 1105 Query: 1080 MVRGEG--DDIWYQRLWRQLTPETM-EAIVEQSQRFLLPL 1116 + R+ P+ Sbjct: 1106 FQDPALVTKSDYCGRVAESYEAIQASPHFRRFMDELYDPM 1145 >UniRef50_Q0VNI2 Exodeoxyribonuclease V gamma chain n=3 Tax=Gammaproteobacteria RepID=Q0VNI2_ALCBS Length = 1138 Score = 531 bits (1368), Expect = e-149, Method: Composition-based stats. Identities = 401/1175 (34%), Positives = 561/1175 (47%), Gaps = 104/1175 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L V H NRL+ L L+ ++RE L P E E LVQS GMAQWL++ L+ GI+A Sbjct: 5 LMVLHGNRLETLTELVADWLQREPL-SPLETETFLVQSNGMAQWLKLQLADALGISAGFQ 63 Query: 62 FPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 F +PA F+W + VL E +P+ S F+K + W+L LLP LL E F LRH+L DD Sbjct: 64 FQMPARFLWGAYRTVLGEDQVPRTSPFDKSRLLWRLYRLLPTLLNSEHFGPLRHFLADDV 123 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL----------VEGLGEAQAWQAPLW 169 D RK QL+ + ADLFD Y +YR DWL WE G+ + +Q WQA LW Sbjct: 124 DGRKRHQLAERLADLFDAYQMYRADWLDDWENGNDRLRKTQDRDTFDDFPASQLWQAHLW 183 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETL---ESATTCPPGLPSRVFICGISALPPVYLQA 226 +AL+ Q R+ +++ F+ L + T PP LP R+ I GISALP L+A Sbjct: 184 RALLADMDDSKQG-LSRSAIHRDFMAALTQQQEQGTPPPRLPRRLIIFGISALPQQALEA 242 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 L AL +H +I +L NPC++YW DI + L + R+ Sbjct: 243 LAALSQHCQILMLVQNPCQHYWADIVEDKQLLRRQLDNRKRHLTALPENRV--------- 293 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE 346 NPLLA+WGK GRD+I LL D + D++ + + + L Sbjct: 294 ----------NPLLAAWGKQGRDFIGLLYDHDDP---DSYRSAFQNQIDLFENREPHTLL 340 Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 + + E N+R +DSS+ F + HS QREVE+L D LL DPTL PR Sbjct: 341 QQLQQDILDLEPLPEPNRRLPLEMDSSLQFRIGHSAQREVEILQDELLDRFSNDPTLQPR 400 Query: 407 DIIVMVADIDSYSPFIQAVFG--SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 D+IVMV DI++Y+P I AVFG RYLPY +SDR A + P+ +A SLL LP R Sbjct: 401 DVIVMVPDIEAYAPHIDAVFGRLERDDPRYLPYTLSDRSAGAASPLAQAVESLLHLPQWR 460 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 F + D+L LLDVP + RF I E L L +W++++ IRWG++ + L++P Q++W Sbjct: 461 FTATDILDLLDVPAVRERFGIDEGDLPQLARWIDQARIRWGLNSPQRKTLDVPGFEQNSW 520 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 FGL RML GY + W + P DE +GL AEL G L+ LL L + + Sbjct: 521 AFGLKRMLAGYLLGDGPA-WMGIEPLDEVAGLGAELAGRLSRLLDTLEQHWQQSRTDASA 579 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMT-LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 +W +L+ F P E + + + +A A + +PL++ R L Sbjct: 580 RQWQQRFTQLLDDLFAPVDEADQTLDAGLRDALNDWLAACAEADFDSLLPLTVARRPLLD 639 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ--KP 701 L+ E +SQRF+AG +NICTLMPMR+IPF+ VCLLGM DG YPRQ P+ FDLM Q Sbjct: 640 ALNAESMSQRFMAGRINICTLMPMRAIPFRHVCLLGMKDGDYPRQQQPMDFDLMRQWGNY 699 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 + GDRSRRDDDRYLFLEAL+SA+ LYIS+ GR+++DNSER PSVLV +L D+I Q + Sbjct: 700 RPGDRSRRDDDRYLFLEALLSARDSLYISWTGRNVRDNSERPPSVLVAQLRDHINQRWHT 759 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNY------------QPGERQSYAREWLPA 809 E ++ LT H PF + + +YA EW Sbjct: 760 DQGEPVD----------ALTVSHPLQPFSARYFYSANDASAANNADAHILHTYANEWRAL 809 Query: 810 ASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 + P E + L RF PV FF+ RL+ + + + D+EP Sbjct: 810 HEEQTHRVDNDQPLPPLENNEPISCAALGRFLKQPVAHFFEQRLKARLKQQRQVLDDSEP 869 Query: 870 FILEGLSRYQINQQLLNALVEQDDAER------LFRRFRAAGDLPYGAFGEIFWETQCQE 923 F +GL R+Q+ QLLN + R +GDLP F E ++ Sbjct: 870 FSFDGLQRFQLQDQLLNEALRAGPEHANDAMRVAMDRLAGSGDLPLAPFDEGNRDSLLLP 929 Query: 924 MQQLADRVIACRQP----GQSMEIDLACNGVQITGWLPQVQPD----GLLRWRPSLLSVA 975 + Q + EI L +QI WL ++ L L Sbjct: 930 LAQPLEHYFTLLADSGTLQPQQEIRLTAGPLQIEDWLTDLRGSSANAQRLVLHTGKLKER 989 Query: 976 --QGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSA 1033 + + W HL CA+ G + +DG + P + A L QL +++ + Sbjct: 990 FDKLTRDWTLHLAACAA-GLPLTTHIQGQDGRFSLPHIHRSDAQQCLDQLGYAWQKALCE 1048 Query: 1034 PLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGD-DIWYQR 1092 PL V + AWLK + + +E M GE + + R Sbjct: 1049 PLPVACATAFAWLK-------------GEEKDNGENEARKVFESGFMHTGEQEKEPAIAR 1095 Query: 1093 LWRQLTPETME------AIVEQSQRFLLPLFRFNQ 1121 W A +++ PL++ Q Sbjct: 1096 AWADFDTLLAASHGDANAFEYWTEQLYAPLYQHAQ 1130 >UniRef50_C1D6T7 RecC n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6T7_LARHH Length = 1159 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 387/1189 (32%), Positives = 540/1189 (45%), Gaps = 117/1189 (9%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF-GIAANI 60 + H+NR ++L ++ + R+ L P + E+ LVQS GMAQWL+ L++ GIAA + Sbjct: 7 FTILHANRAEMLRDVILAWLARDPLSSPLDDEVFLVQSQGMAQWLKHALAESPAGIAAAL 66 Query: 61 DFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 DF LP F+W + VL E +P +S F+K +SW+L LP L F L ++ D Sbjct: 67 DFQLPQGFLWRCYRAVLGEDSVPAQSPFDKAPLSWRLYRELPAWLHEPVFAPLARFVEAD 126 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV-------EGLGEAQAWQAPLWKA 171 +D R+L+QL+ + ADL+DQY YR DWL WE GH L E + WQA LW+ Sbjct: 127 ADPRRLYQLAHQLADLYDQYQSYRADWLTGWENGHDDITRHGRPAPLPEGERWQAELWRR 186 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 L HRA ++QRF+ L T P LP RV + G+SALP L+AL A+ Sbjct: 187 LAGQLAS--ARHTHRAAVHQRFVAALREGTPPPGSLPERVVVFGLSALPQQTLEALDAIS 244 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 +H + + NPCRYYWGDI + + QR + Sbjct: 245 RHSHVLMAVNNPCRYYWGDIVEGREWLRRQAEQRHRRRS-----------GMPAALDDST 293 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLES--------SQELDAFVDVTPDNLLHNIQSDIL 343 +PLLASWG+ GRD+I LL+D + +Q++D F + P L +Q Sbjct: 294 LHLHAHPLLASWGRQGRDFIALLADYDRWQSAAATHAQDIDLFDEAVPAGTLPLLQQ--- 350 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP-T 402 V +E L D SI FHV HSP REVE+LHD+LLAM ++ Sbjct: 351 ------VQQAVLELEPLPAEPHRLPLPDHSIAFHVAHSPLREVEILHDQLLAMFDDPELA 404 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSA--PADRYLPYAISDRRARQSHPVLEAFISLLSL 460 L PRD++VMV DI SY+PFI+AVFG R++P+A+SD+ A + P+L A LL L Sbjct: 405 LKPRDVMVMVPDISSYAPFIRAVFGKLPPDHPRFIPFALSDQSAVSTEPLLRALQQLLDL 464 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT- 519 P R +VL LLDV + RF + E L L +W+ SGIRWG+ EL +P Sbjct: 465 PALRLTVSEVLELLDVAAMRRRFRLRETDLPLLTRWIEGSGIRWGLSAAQRAELGMPDDF 524 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 Q++W FGL RMLLGYA + WQ + PYDE G+ A L G LA LL L WR+ L Sbjct: 525 DQNSWHFGLDRMLLGYACGAGAS-WQGMAPYDEVGGMDAALAGQLADLLSTLAHWRQCLQ 583 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAE-TEAAMTLIEQQWQAIIAEGLGAQ-YGDAVPLSLL 637 + W + A E I +A G +PL ++ Sbjct: 584 EPATPAGWQARIAALAEACLDIKDEHDLLLYAGIADTLDNWVATLDGNGLADTRLPLEVV 643 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 RD L +L +S RFL G VN TLMPMR+IPFKV+CLLG+NDG YPR FDLM Sbjct: 644 RDVLLGQLADTSVSMRFLGGAVNFGTLMPMRAIPFKVICLLGLNDGDYPRSQNRADFDLM 703 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 +Q + GDRSRRDDDRYL LEAL+SA+++ Y+S++G+S +DN R PSVLV++L DY+ Sbjct: 704 AQDYRPGDRSRRDDDRYLLLEALLSARRRFYLSWVGKSPRDNRPRPPSVLVEQLRDYLAA 763 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH 817 L + + + A LT H PF P+ + + P + Sbjct: 764 GWQ---AAPLGTEPATTGLLAALTTEHPLQPFSPRYFSRAPDARPQPDQPPLFTYDSDWR 820 Query: 818 S------------EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 + + TL RF P F RL+V F D Sbjct: 821 AIHDATDPPAEPAAALPLPLPDWDGRTDAVTLARFLRQPAATFLHGRLKVRFGELDELAE 880 Query: 866 DTEPFILEGLSRYQINQQLLNALVEQDDAE------RLFRRFRAAGDLPYGAFGEIFWET 919 D EPF L+ L+ +Q+ +LL A+ + +AE R G LP+GA G + Sbjct: 881 D-EPFALDPLATHQLKSRLLEAVRDVPEAETGRHWQAAATRLTEEGGLPFGAAGAQLLQA 939 Query: 920 QCQEMQQLADRVIACRQPGQSMEIDLACNGVQ---------------ITGWLPQVQPDGL 964 + L + L + + P Sbjct: 940 CHAPVMALRQNWHRLDDLTDLPPLTLPPLLLPLAGDQTATLLAHCDGLQAVAADSPPLRR 999 Query: 965 LRWRPSLL--------------SVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPP 1010 R L + + W HL A+ G L + + + P Sbjct: 1000 RVMRTGRLADSAGRGADTRWIPRLHTLVGFWPAHLALQAA-GLAIPTLIVGETVTLQLAP 1058 Query: 1011 LAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTK 1070 L A++A H L L +R+ PL + ++ G WL+ Q+ + Sbjct: 1059 LPADEARHCLQVLAGYWRQAHGEPLPLPCKTAGVWLQ-----------------QQDASA 1101 Query: 1071 FLQAYEGNMMVRGEGDD-IWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 QAYEG GE + RL+ + + + PL Sbjct: 1102 ARQAYEGGYHSTGERAESPALARLFPAFEDLDLARLDALATDLYAPLLA 1150 >UniRef50_C5JAU6 DNA helicase/exodeoxyribonuclease V, gamma subunit n=1 Tax=uncultured bacterium RepID=C5JAU6_9BACT Length = 1183 Score = 527 bits (1357), Expect = e-148, Method: Composition-based stats. Identities = 394/1199 (32%), Positives = 555/1199 (46%), Gaps = 127/1199 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG------ 55 L + H NR+++L + RE P E E+ILVQS GMAQWL++ L++ G Sbjct: 10 LTLIHGNRIELLRDDLVDRFRREPSA-PLESEIILVQSNGMAQWLKLGLAETGGRGGGGG 68 Query: 56 ----IAANIDFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFT 109 IAA ++ LPA F+W ++ VL E +P+E+ F+K + W+LM LLP + E F Sbjct: 69 SGLGIAAALELLLPARFLWRIYRSVLGEAAVPEETPFDKTRLVWRLMRLLPGIAAEERFA 128 Query: 110 LLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEA 161 LRH+L D+D+RK +QLS + ADLFDQY VYR DWLA W G + + E Sbjct: 129 PLRHFLRQDADQRKCYQLSVRLADLFDQYQVYRADWLACWAKGEDLLIDARGRRSAIPEE 188 Query: 162 QAWQAPLWKALVEYTHQLGQPRW----HRANLYQRFIETLESATTCPPGLPSRVFICGIS 217 Q WQA LW+ L+ + G RA ++ F+ + P GLP RV + GIS Sbjct: 189 QRWQAALWRLLIADVARTGAGVDAVSGGRAEVHAAFLRRARTEDLLPAGLPRRVTLFGIS 248 Query: 218 ALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLF 277 ALP L+ L AL + ++ + NPC++YW D+ L + QR + E Sbjct: 249 ALPYQSLEVLMALSRWTQVLMYVHNPCQHYWADVIAGRELFRARRGQRGGAHGVAEPV-- 306 Query: 278 RDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL--------------ESSQEL 323 PLLA+WG GRD+I LL D + Sbjct: 307 ----------PEALLHLHAQPLLAAWGMQGRDFIGLLEDAVGEGALWAEGEPLAFDVERE 356 Query: 324 DAF--VDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHS 381 F LL +Q DILEL D S+ FHV H Sbjct: 357 ACFVARGGAAGTLLQQLQEDILELRPLDETRALW--------PPVDAQQDRSLCFHVAHG 408 Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD--RYLPYAI 439 QREVE+LHD+LL L DP+L+PRDI+VMV DID+Y+ IQAVFG A+ R++P+ + Sbjct: 409 AQREVEILHDQLLDALNADPSLSPRDILVMVPDIDAYAAHIQAVFGLHGANDPRFIPFVV 468 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 +R R++ +L LL L +R + D+L L++P L RF I E L LR+W+ + Sbjct: 469 VNRTRRKADLLLMTLERLLGLARARVTANDLLDWLELPALRRRFGIAEADLPLLRRWIRD 528 Query: 500 SGIRWGIDDDNVRELE-------LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 SGIRWG+D + + +HTWRFGL RMLLGYA+ W + P+DE Sbjct: 529 SGIRWGLDASHCGAVLGVPGGEIDGTRTRHTWRFGLERMLLGYAVGDRGAPWCGIAPFDE 588 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 EL+G LA L+ + R + + W R +L FF P+ E A TL+ Sbjct: 589 IGLGDGELLGRLADLVAAVEATWRQMKSAATVAAWCGRLRGVLARFFAPEEEDADAYTLL 648 Query: 613 E--QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 A A AQ D +P++++ + L++ +SQ F AG V TLMPMR+I Sbjct: 649 RLDAHLDAWEALCAEAQLVDPLPVTVVGEYWLSCLEEGGLSQGFFAGAVTFATLMPMRAI 708 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 PF+ VCLLG+NDG +PR + FDLM + + GDRSRR+DDRYLFLEAL+SA+++L + Sbjct: 709 PFRQVCLLGLNDGAFPRPGNRIDFDLMGGRYRPGDRSRREDDRYLFLEALLSARERLALF 768 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 ++GR I DN+ PSVLV +L D++ L G S + A LT H PF Sbjct: 769 WVGRGIHDNAVAPPSVLVGQLRDHLAAGWRLAGGADPAGG-SGQALVAALTVEHPLQPFS 827 Query: 791 PQNY-----QPGERQSYAREWLPAASQAGKAHSE---FVQPLPFTLPETVPLETLQRFWA 842 + +YA EW PA A P T E + L L R + Sbjct: 828 RDYFCRGAETDARLFTYAHEWRPAREAGAPAALPVGSVPLLPPVTREEPLRLVELARLFK 887 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFR 902 PVR FFQ RL V F E + D EPF L+ L +Q LL A E D +R R R Sbjct: 888 DPVRGFFQQRLGVRFEREALFLDDHEPFDLDALEHWQSIDALL-ACREPDALDRGLERLR 946 Query: 903 AAGDLPYGAFGEIFWETQCQEM-------QQLADRVIACRQPGQSMEIDLACNGVQI--- 952 +G LP G GE E + + Q L R ++ +G + Sbjct: 947 LSGVLPAGGQGEHLAEALRETLTRLNGQEQALLARWSGEEIGERTFRFARQIDGRSVAVV 1006 Query: 953 ---------TGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKD 1003 G L ++ ++ ++ W+EHL + G G + + L +D Sbjct: 1007 DSLRGVRRGNGVLGRIVRTASRVLNAGVIRPEVLIEAWVEHLAWQMRLGAGIT-VVLGRD 1065 Query: 1004 GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDST 1063 G PL+ + A L L+ + +GM PL LP G A Sbjct: 1066 GGIELAPLSRQAAGMALEALLAAWWQGMRHPLAFLPGVGWAGFDGV-------------- 1111 Query: 1064 LQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETME-AIVEQSQRFLLPLFRFNQ 1121 +KA F + + +R++ T + + S+ L PL + Sbjct: 1112 -EKAEKAFERI---------RVHHPYVRRVFVDFTAFAASGELEQWSEALLRPLREAAR 1160 >UniRef50_C8R0F3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0F3_9DELT Length = 1205 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 379/1200 (31%), Positives = 562/1200 (46%), Gaps = 104/1200 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L +Y SNRL+ L + ++ + P E ++VQS GMA WL +L+Q+FGI A+ D Sbjct: 25 LILYRSNRLEALLDCLAASLQDDPP-PPLSSECVVVQSRGMATWLGQSLAQRFGIWAHPD 83 Query: 62 FPLPASFIWDMFVRVLPEIPKESA-FNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 FP P FI + E + F+++ ++ ++ LLPQLL R +F LR YL +D Sbjct: 84 FPHPRRFIERLLRAAAGEEAATATSFSRELLTLAILELLPQLLSRPEFAPLRRYLEG-AD 142 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 K QL+ + A +FDQYLVYRP+ + WE + WQA LW+ L + Sbjct: 143 DWKSLQLAERIAYVFDQYLVYRPEMVLAWEDRQAEPEDDD--RWQALLWRQLAQRFGS-- 198 Query: 181 QPRWHRANLYQRFIETLESATTC-PPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 A L+ + L+ P LP+RVF+ GI+ LPPVYL L K + HLL Sbjct: 199 -----PARLFHQAKGRLQQGDLAQPELLPARVFLFGITTLPPVYLDLLNEAAKLLPCHLL 253 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 P R YWGDI P +LL R P +++ D G+PL Sbjct: 254 LFAPARDYWGDILSPKAANRLLLR---------HHPPAANADEQHGRDFEHLHLDTGHPL 304 Query: 300 LASWGKLGRDYIYLLSDLES---SQELDAFVDVTP-----DNLLHNIQSDILELENRAVA 351 LASWG++GR++ +++ + D FV+ ++L +Q DILEL+ A A Sbjct: 305 LASWGEVGREFQHIMEERAEYLQPAHGDCFVNPATVEVAGASILARLQRDILELQEPAPA 364 Query: 352 GVNIEE---------FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 + + D SI H CHSP REVEVL D+LLAML + Sbjct: 365 AADQRNSAGDSPNPNNRLPEQAAGAVDHDHSIVIHACHSPLREVEVLQDQLLAML-DVEG 423 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGS-APADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 PRDI+VMV DI++Y+P I+AVF RY+P+ ++DRR + P+L+A ++LL L Sbjct: 424 YRPRDIVVMVPDIETYAPLIEAVFRRPTGDRRYIPFRLADRRVSREAPLLDALLNLLDLA 483 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 R VL L + F + L+ L QW+ + +RWGID+++ R + P Q Sbjct: 484 RGRLPLSQVLDFLAREPVRQGFGLDGRQLQRLEQWLEQLRVRWGIDEEHRRRHDQPPDRQ 543 Query: 522 HTWRFGLTRMLLGYAMESAQG-EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 +TWRFGL R++LGYA+ +LP+D+ G A+L G L L + + Sbjct: 544 NTWRFGLDRLILGYALPGEDRYLVAGILPFDDIEGQDAQLAGVLLQFSQALFSLVDEVRE 603 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAE----TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 + + W+ + R + AFF P+ + + A++ E A + L+ Sbjct: 604 AKTMARWVELVRRAMAAFFAPEERAAAGEQWQRQSLRDALVALLQESERAGLERPLELAA 663 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 L RLD+ ++ FL G + CT++PMR+IPF VVCLLGMNDG +PRQ P GFDL Sbjct: 664 FLRLLRARLDEAGMAAGFLEGGLTFCTMLPMRTIPFPVVCLLGMNDGDFPRQDNPAGFDL 723 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 ++ P+ GDRSRR DDRYLFLE+L+SA+++LYISY+GRSI+DN+E PS LV EL+D + Sbjct: 724 LAAAPRPGDRSRRRDDRYLFLESLLSARRRLYISYVGRSIKDNTELPPSPLVDELLDCLE 783 Query: 757 QSHYLPGDEALNCDESEAR---------VKAHLTCLHTRMPFDPQNYQPGE--RQSYARE 805 + + + + + +A H PF P+ +QP + +YA E Sbjct: 784 RMPEAVAESTADSEGTGEEERLADRRRRTRARFVVNHPLQPFSPRYFQPDQPLLFTYAAE 843 Query: 806 WLPAASQAG-------KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFR 858 + P S P L L RF+ +P R + + L ++ Sbjct: 844 YAPVPSTRPVGTGQGGPDSPRPKAAATAPAPGAPTLAELHRFFRNPSRWYAEHHLGLSLP 903 Query: 859 TEDSEIPDTEPFILEGLSRYQINQQLLN----------ALVEQDDAERLFRRFRAAGDLP 908 + PD EP LE L Y++N+QLL A + + RL A G+LP Sbjct: 904 PGEEARPDREPVFLERLDAYRLNRQLLQDPASVLAAVNAGEDDEAGRRLRHLLAARGELP 963 Query: 909 YGAFGEIFWETQCQEMQQLADRVI--ACRQPGQSMEIDLACNG-VQITGWLPQVQPDGLL 965 ++ +A + +P ++ +DL + + G L GLL Sbjct: 964 LAGAAAPALAEAMAAVEPVAAFLATNPAGRPLPNLPLDLELGQHLYLRGELRDRAELGLL 1023 Query: 966 RWRPSLLSVAQGMQLWLEHLVYCASGG--NGESRLFLRKDGE--------WRFPPLAAEQ 1015 RWRP + WL+HL CA L + + F +A EQ Sbjct: 1024 RWRPGRSKPVFLLLAWLDHLALCARAPADQDHQCLLVARGKGQDEGQADIRIFRAVAQEQ 1083 Query: 1016 ALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAY 1075 A L+QL++ +R G APL P AW Y A+ D ++AR LQAY Sbjct: 1084 AQSLLAQLLDLWRRGQEAPLPFFPACSHAWSDKIYQAKES---DPAKLCRQARQAALQAY 1140 Query: 1076 EGNMMVRGEGDDIWYQRLWRQLTP--------------ETMEAIVEQSQRFLLPLFRFNQ 1121 G G+G D + ++++ P E ++ LP+ R + Sbjct: 1141 HGGDFHPGDGADPYVGLIFQEADPAGEWSEDDSSGPGGSDWEEFTAVAETVYLPMLRVLE 1200 >UniRef50_Q1QYD4 DNA helicase/exodeoxyribonuclease V, gamma subunit n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYD4_CHRSD Length = 1210 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 382/1206 (31%), Positives = 554/1206 (45%), Gaps = 94/1206 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M V H+N L+ L L ++ R R P PE LVQS GMAQWL++TL++ GIAA++ Sbjct: 1 MFSVIHANHLEDLGTLALDVIRRHR-QPPLVPETFLVQSNGMAQWLRLTLAEADGIAASV 59 Query: 61 DFPLPASFIWDMFVRVLPE-IPKESAFNKQSMSWKLMTLLPQLLERED-------FTLLR 112 DFPLP+SF+W + VL + IP++S F+K ++W+LM LL + L+ E + LR Sbjct: 60 DFPLPSSFVWRAYRAVLGDDIPEQSPFDKTPLAWRLMALLERCLDPETSPDDPTCYAPLR 119 Query: 113 HYLTDDSDKRK-------------LFQLSSKAADLFDQYLVYRPDWLAQWETGH-LVEGL 158 YL ++ + + L+ + ADLFDQYL+YRP+W+ WE G L Sbjct: 120 DYLQGEALEASPLPGAAEEARERRRWHLAVRLADLFDQYLIYRPEWIEAWERGEHAPADL 179 Query: 159 GEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA 218 + Q WQ LW+AL+E HRA L++RF++ P +P RVF+ GISA Sbjct: 180 PDDQRWQPALWRALIEDA-PAAAREHHRARLHRRFLDAARGLRKRPRDVPPRVFVFGISA 238 Query: 219 LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFR 278 LP L+AL AL +++ L+ NPCR+YWGDI K R + ++E Sbjct: 239 LPAQTLEALHALSGVVDVFLMIANPCRHYWGDIVSDRDAIKRAGRLSSQARREQEARHPE 298 Query: 279 DSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPD-NLLHN 337 A + + NPLLA WG GRD+I L + ES + D DV D + Sbjct: 299 APWLAEL--DEEALHLHANPLLAGWGTQGRDFIVGLYEFESDRGFDLETDVFRDMAPEQS 356 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 ++ E R R + D S++ HSP REVE+LHDRLLA Sbjct: 357 PTLLQQLQQDVLELVHPGERARREGGPRRIAEDDESLSLVSAHSPLREVEILHDRLLAAF 416 Query: 398 EE----DPTLTPRDIIVMVADIDSYSPFIQAVFGSAP--ADRYLPYAISDRRARQSHPVL 451 E L PRDIIVMV DID Y+P I+AVFG P R++P+ I+D+ A ++HP++ Sbjct: 417 ERAEAAGQPLRPRDIIVMVPDIDRYAPCIEAVFGQLPPSHPRHIPFTIADQVASEAHPLM 476 Query: 452 EAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 + LL LP+ R +VL L+VP F I E L LRQW+ SG+RWG+ ++ Sbjct: 477 ALALLLLELPERRLTVSEVLDALEVPAFRTAFAIDEAELERLRQWLAGSGVRWGLSAEHR 536 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQ-----------------GEWQSVLPYDESS 554 L PA G+++WRFGL+RMLLGYA+ G++Q ++PY E Sbjct: 537 DSLGFPALGENSWRFGLSRMLLGYAVGEPSAGGARDDSEDSLGHAPSGDFQGIVPYAEVG 596 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 GL A+L G +A+LL L L + WL + + A P E + Sbjct: 597 GLEADLAGRVATLLSTLEQQCAALGERLTPMAWLGRLQALFAACLQPGTADEHDVMARLD 656 Query: 615 Q-WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + A + + V L ++RD L LD+ ++QRFLAG VN TLMPMR+IPF+ Sbjct: 657 AALARWAQQCRHADFEEPVGLGVVRDALRAELDEGGLAQRFLAGKVNFATLMPMRAIPFR 716 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 V LLGMNDG YPR P FDLM+ +P+ GDRSRRDDDRYL LEA++SA+ KL +S++G Sbjct: 717 EVYLLGMNDGDYPRVRQPQDFDLMATRPRPGDRSRRDDDRYLMLEAMLSARAKLTLSWVG 776 Query: 734 RSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 ++DN+ R PSVL+ EL+D + Q +P D A + D AR+ L H PF + Sbjct: 777 HDVRDNTPRPPSVLIGELLDTLEQGWDVPEDGAGSRD---ARLARRLIETHPLQPFSRRY 833 Query: 794 YQPGE--------RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPV 845 ++ + ++ A+ + E + L LQR P Sbjct: 834 FERDDPRFTYEASWEALYATPEDTAAATADGAPSPDASMASLPDEPLSLGDLQRVLRRPW 893 Query: 846 RAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAG 905 + RL V++ D EPF L+GL + + ++LL+ + R R AG Sbjct: 894 TVYLG-RLGVHYVDPHVPDEDNEPFALDGLEDHGLKRELLDGARGGVALASVAERLRLAG 952 Query: 906 DLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQS-----MEIDLACNGVQITGWLPQVQ 960 LP FGE E + + + + + + + + L V Sbjct: 953 RLPTAGFGEALIEPRLARLSRQVESWRRDVAACTAASPFLARFQGGASALTLEARLDDVF 1012 Query: 961 --------PDGLLRWRPSLL---------------SVAQGMQLWLEHLVYCASGGNGESR 997 P L+ P V + +L L+ A+ S Sbjct: 1013 AAPEDGAAPWCLMTLEPGHYGHLKVEGTGPHRHVGKVHRLYGGYLRWLLANATLEAPCSW 1072 Query: 998 LFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAM 1057 + +D P +AA A L+ ++ + P + E K +A+ Sbjct: 1073 TAVFEDRCLSLPGMAAATARQQLATWLDAWARAYRMPWPAIGEVAQEIWKRVPRETCEAL 1132 Query: 1058 LDDDSTLQKARTKFLQAYEGNMMVRG---EGDDIWYQRLWRQLTPETMEAIVEQSQRFLL 1114 + R + YE + D +LW V S Sbjct: 1133 QAGEPLESGLREALIARYETDAYAGPAALRARDGALGQLWPDFAAFEAAGGVAASLTLYA 1192 Query: 1115 PLFRFN 1120 PL Sbjct: 1193 PLLDML 1198 >UniRef50_C5TL47 Exodeoxyribonuclease V, gamma subunit n=3 Tax=Neisseria RepID=C5TL47_NEIFL Length = 1099 Score = 524 bits (1348), Expect = e-147, Method: Composition-based stats. Identities = 310/1139 (27%), Positives = 515/1139 (45%), Gaps = 97/1139 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M ++ S+RL+ L + I + LD E ++VQS GM ++L + +++ G+AAN+ Sbjct: 1 MFYLFQSDRLESLAEMCARIHQASPLDSVLAQEEVVVQSQGMRRYLNVFFARELGVAANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLER--EDFTLLRHYLTD- 117 F LPA W + +++P++P S F+ + M W+L+ L + + ++ +R L Sbjct: 61 KFSLPAGLAWQLMRKLVPDVPPLSPFSPEVMRWRLLDLFRSEMFQTAPEYENVRLKLESY 120 Query: 118 -DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYT 176 S +QL+ + AD+FDQYLVYRPDW+ W+ G L+ GLG+ + WQA LW+ L + Sbjct: 121 LYSSASADYQLAGQMADIFDQYLVYRPDWIDAWQAGKLL-GLGDDEDWQARLWRYLDD-- 177 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 Q HR L+++ + L+ + LP R+F+ GIS + P+YLQ L + KH ++ Sbjct: 178 --GSQSALHRVALWEKLLAQLDKSV-----LPQRLFVFGISTMAPMYLQLLHQISKHCDV 230 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 + NP YWG++ D A + K + G Sbjct: 231 FVFALNPSSQYWGEVIDEAQILK--------------------------RGDEADLSQAG 264 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL----ENRAVAG 352 +PLLAS GK GRD+ LS++E+ Q++ + + D LLH +Q DI L E Sbjct: 265 HPLLASLGKQGRDFFDFLSEVETEQDIQVYEEGKDDTLLHCLQKDIQNLIMPSERLYQQE 324 Query: 353 VNIEEFSRSDNKRPLDP------------LDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 ++ + D S+ HSP RE+++L + L +L+ + Sbjct: 325 EGEAGGQQALVQVHDADGNPVCVEPDKLLNDGSVKIVAAHSPLRELQILKEELSLVLQNN 384 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY-LPYAISDRRARQSHPVLEAFISLLS 459 P P DI V+ +I+ YSPFI+AVFG A A LPY+ISD + + P+L A L Sbjct: 385 PDWQPHDIAVLTPNIEPYSPFIEAVFGQAHAGSQALPYSISDVKLSRRQPLLYALAQTLD 444 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 L +SRF + VL LL+ ++ RF ++EE + L + V + WG+D Sbjct: 445 LLESRFEVDKVLPLLESRLVLQRFGLSEEDVPLLHETVAGLNVHWGLDQTMR----DGKD 500 Query: 520 GQHTWRFGLTRMLLGYAMES-AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 TW+ + R+ LG+ + G W+ V + + ++ A + L Sbjct: 501 NLFTWQQAVERLALGWMLPEGGNGMWRGVSAWYSNVN-QLDVFSGFAEFIRTLADMAAQW 559 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 +E W+ CRD+L F PD + + A EQ E A++ +P + Sbjct: 560 QAPANVEIWVQRCRDLLEKLFAPDTDDQYAKQQFEQSLAKWQEEAQLAEFDGLLPCKTVI 619 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 + + LD E FL+G + C+++PMRS+PFK+VCLLG+NDG +PR FDL++ Sbjct: 620 RHIRRFLDSES-QAGFLSGGITFCSMVPMRSLPFKMVCLLGLNDGDFPRNTKAAVFDLIA 678 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 + PK+GDR+RRDDDRYLFLEALISA++ LY+SYIGR I++++E PS L+ EL+D I Sbjct: 679 KHPKKGDRARRDDDRYLFLEALISAREMLYLSYIGRDIRNDAEFAPSSLISELLDTIAAM 738 Query: 759 HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE----RQSYAREWLPAASQAG 814 +S + H F + +Q S +++ A +Q Sbjct: 739 TG----------KSGRELSEKWVKHHPLQAFSRRYFQKDALSDGLFSTRQDYADALNQPP 788 Query: 815 KAHSEF--VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL 872 F +T+ L FW +PV+ + + L + D EPF Sbjct: 789 AEAQPFFLEALSQEEPGKTIHQGELVSFWRNPVKVWLKKNLSWDQPYLDGAWESAEPFE- 847 Query: 873 EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI 932 +I L+A + +D E R A +P G G ++ + + + +I Sbjct: 848 -PQHEGRIADAYLDARRKGEDFEDTAIRLNAESLMPVGELGGLWQKQYQISAKNVDTELI 906 Query: 933 ACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGG 992 + + + + + G + + G + + + + LEHL++CA Sbjct: 907 RSNKRPSE-PYEESFGDLVLQGTIGNLYECGRIVFLNQKDNAPNRIARLLEHLIFCAVAP 965 Query: 993 NGES---RLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTC 1049 + + + + E A L + + +R G + PL ++ A + Sbjct: 966 KSVANRQTHIVSLGQTETYAAIGQEAARELLKEWLVYFRIGQNTPLPFFAKTSLAAAEEY 1025 Query: 1050 YDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLT--PETMEAIV 1106 ++ A K + + GN M +G+ + + ++ L P Sbjct: 1026 NKKED---------WDAALRKAHEVFNGNKMSKGQKEYTEVKLVFGHLEESPLDEPLFE 1075 >UniRef50_Q60AZ6 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Methylococcus capsulatus RepID=Q60AZ6_METCA Length = 1138 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 318/1191 (26%), Positives = 511/1191 (42%), Gaps = 133/1191 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L ++ SNR ++L + + + DPF E ++V S + + L++ + +FG+ AN++ Sbjct: 5 LNIFFSNRFEILTQRLFDDLAQGP-ADPFVAEQVIVPSLAVRRRLELDHADRFGVCANVE 63 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 F A ++W +V+ E+ S F +++W++ +L + L+ YL +D Sbjct: 64 FSYLAHWLWVQIGQVI-EVGASSPFAPATLTWRVFRMLGEEALVSAHPRLKSYLAR-ADG 121 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGE----AQAWQAPLWKALVEYTH 177 F L+ + A L +QYL YRPDWLA W G GL E +AWQA W+ LV+ Sbjct: 122 AMRFDLAQRVAHLLEQYLTYRPDWLAAWLEGRPASGLPEASREDEAWQAAFWRTLVDELE 181 Query: 178 QLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIH 237 R H + + R +E + T GLP+R + + +PP+YL L L + E+H Sbjct: 182 ---VRREHPSAAFFRAVEAMGPEATRRAGLPARAHLFCLPTIPPLYLDILGKLARWTELH 238 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 L NPCR YW DI DP L L R ++ GN Sbjct: 239 LYVLNPCREYWFDIVDPRRLNYLEVR------------------------GDALYRETGN 274 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDA--FVDVTPDNLLHNIQSDILELENRAVAGVNI 355 LLA+WG+ + +I LL D +D F +LL +Q IL+L + Sbjct: 275 RLLANWGQQTQAHIDLLFDKAEGAVIDDAQFEPPARISLLAAVQEAILDLRDPEPGCCAS 334 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 D SI HVCHS RE+EVLHD+LLA+L DI+V++ + Sbjct: 335 V------------AGDRSIEVHVCHSLVRELEVLHDQLLALLARPDAPKVSDILVVMPRL 382 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 + +P I AVFG+APA R +PYAI+ R ++P A ++LL L SR + V L Sbjct: 383 EEAAPLIDAVFGTAPAARRIPYAITGLRRTVANPAAAALLTLLGLFASRCKASAVYEFLQ 442 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 P++ ARF + + L + W +GIRWG++ + + + LP +H++ GL R+ LGY Sbjct: 443 RPLVHARFGLGLDDLECIHDWFQAAGIRWGLNGAHRKAVGLPEVERHSFCDGLDRLFLGY 502 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 A+ ++ LP G A +G A + L W R + + W ++ Sbjct: 503 ALGDVPVQFDGRLPAGSPEGSEALALGGFAHFVDLLTHWHRVWSTPATAQTWGERLNAVV 562 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 AF + ET + + + A+ A + ++R L LD Sbjct: 563 GAFLMETPETVPDLQEVREAIAALSRHWGEAAVTGTIEPEVVRVALESLLDD-PARGGTP 621 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 +G + + +RS+P++VVC++G+NDG +P P FDL++Q P+RGDR RR D+R L Sbjct: 622 SGRLTFTAMASLRSLPYRVVCVIGLNDGEFPHPDRPAEFDLIAQAPRRGDRQRRYDERNL 681 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 FL+ L++A+++LY+SY GRS++DN+ PS + + ES Sbjct: 682 FLDLLLAARERLYLSYTGRSVRDNAPLPPS-------TLLSELLDYLLPLVAAAGESPEE 734 Query: 776 VKAHLTCLHTRMPFDPQNYQPG-----ERQSYAREWLPAASQAGKAHS------------ 818 + L H F P + S+ E+ A A Sbjct: 735 ARRRLVVEHPLQAFSPVYFDAAVAKDPRLVSFNSEYCEALRAARSPRPSGEGVRACESHS 794 Query: 819 ----------------------------------------EFVQPLPFTLPETVPLETLQ 838 P L+ L+ Sbjct: 795 QEPEECSAILAERERADHGPAGPIAGEEQNDPDFEHAPFFPAPMAAPEPEWREPNLDVLK 854 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF 898 RF+ +P R + RL + ++E+ D EPF+ +R ++ ++LL ++ E + Sbjct: 855 RFFRNPCRYLLEQRLGLTLAEGEAELADDEPFLPAYFARGEVAERLLPLMLSAATEEAVE 914 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ------SMEIDLACNGVQI 952 RA + P G GE+ + + +++ A+R+ Q + + + Sbjct: 915 VVARAGIEFPQGQLGELLLKGELTRIREYAERIAGQTQEEPLQPLPGRLAFQIEGETWTL 974 Query: 953 TGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCAS--GGNGESRLFLRKDGEWRFPP 1010 +G L QV GL+RWR + WL+HL A G + ++ +DGE+R P Sbjct: 975 SGALGQVWRRGLVRWRYDDTRPVDYLSGWLDHLFLNALAVRGVEPTTTWISRDGEYRLRP 1034 Query: 1011 LAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTK 1070 +AA A L +L+ YREG+ PL P S A Q A + Sbjct: 1035 VAA--AQERLRELVALYREGLRLPLHFFPRSAWACALGLKQG----------GSQAAERQ 1082 Query: 1071 FLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 + +EG+ RGE +D+ Y++ R A + PL + Sbjct: 1083 ARKRWEGSGDRRGESEDLAYRQALRGQADPLDGAFFRTVRTVFGPLLDHLE 1133 >UniRef50_C7I4N7 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Thiomonas intermedia K12 RepID=C7I4N7_THIIN Length = 1173 Score = 510 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 376/1202 (31%), Positives = 550/1202 (45%), Gaps = 142/1202 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L + NRL++L + + ++ L P E E+ILVQS G A+WL+M L+ + GI A Sbjct: 9 LFILQGNRLELLRDALLEWLAQQPLA-PLEEEVILVQSNGAAEWLKMALAAQGGICAATR 67 Query: 62 FPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQ------------------ 101 LP F+W + +VL P +S +K ++W+LM LL Sbjct: 68 VELPGRFLWRTYRQVLGRAATPSQSPLDKPLLTWRLMRLLGAPGAELHPARPPWESRKLG 127 Query: 102 ---------LLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETG 152 L+ + L YL D + QL+ + ADL+DQY +YR DWL W G Sbjct: 128 AAQRFLEGGTLDADVCAPLLQYLQG-QDLLRRLQLAQRLADLYDQYQIYRDDWLDAWAQG 186 Query: 153 HLV--------EGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCP 204 V L E Q WQA LW+ ++ + + + RA + + ++ L +A Sbjct: 187 RDVLIDALGRATPLPEDQRWQAWLWRRVLAELSE-AERQSTRAQVQRAMLQALNTADIAA 245 Query: 205 ----PGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKL 260 P LP RV + G S LP V L AL AL +++++ + NPCRY+W DI + L + Sbjct: 246 DPTRPALPRRVVLFGASHLPTVVLDALVALSRYVQVLIALPNPCRYHWADIIEGRELLRA 305 Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESS 320 +R D +PLLA+WG+ GRD++ L + Sbjct: 306 APARRPLRAGDLAQVSLEVM------------HAHAHPLLAAWGRQGRDFMRQLDAFDER 353 Query: 321 QEL---------DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 D F D D LL +Q+ I +L ++ + D Sbjct: 354 ANAADRPGLPRHDLFDDAPGDTLLEQMQAAIRDLLPL-----------PEHSRTLISAAD 402 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEE---DPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 S+ FH+ HS QREVE+LHD+LL +L + L PRDI+VM DI ++P I+AVFG Sbjct: 403 RSVVFHIGHSAQREVEILHDQLLHLLAQPSGGRPLRPRDIVVMTPDIAPFAPAIRAVFGQ 462 Query: 429 A--PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 +R++P+ I+D AR + P+L A LL LP R ++ D+ ALLDVP +A RF + Sbjct: 463 YPPGDERFIPFDIADLSARATEPLLLALDWLLRLPQERILASDISALLDVPAIARRFGLR 522 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPAT-GQHTWRFGLTRMLLGYAMESAQGEWQ 545 E L QW+ +G+RWG+D D+ L L A Q++WRFGL RMLLGYA G ++ Sbjct: 523 PEDRPRLTQWIVGAGVRWGLDVDHRAHLGLGACGEQNSWRFGLRRMLLGYAGAGEDG-FE 581 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 +++P+DE GL A LVG LA LL L W R Q +W RD+L+A LP Sbjct: 582 NIVPFDEIGGLDAALVGPLADLLDVLQAWWRTALQNATPGQWAQYARDLLDAISLPQDLR 641 Query: 606 EAA-MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 E ++ + AQ+ +AVPL +LR+ LD+ RFLAG V CTL Sbjct: 642 ERETRARLDDALSTWLDHCAAAQFDEAVPLQVLRESWLSGLDEAAGGGRFLAGGVTFCTL 701 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ--KPKRGDRSRRDDDRYLFLEALIS 722 MP+R+IPF+VVCLLGMN+G YPR+ FDL+ Q + + GDR+RR+DDRYL LEAL+S Sbjct: 702 MPLRAIPFEVVCLLGMNEGDYPRRSPHSDFDLLHQPGQYRPGDRARREDDRYLMLEALLS 761 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 A++ LY+S+ GRS +DN+E+ PSVLV +L DY+ G + A T Sbjct: 762 ARRMLYVSWAGRSPRDNTEQPPSVLVAQLRDYLAAGWQGEGQ---------GDLLAQRTT 812 Query: 783 LHTRMPFDPQNYQPG-ERQSYAREWLPAASQAGKAHSEFVQPLPFTLP--ETVPLETLQR 839 +H PF + ++ +YAREW A + + P E + L+ L R Sbjct: 813 VHPLQPFSRRYFEGDAALFTYAREWRQAHGGVAENGTGNGNGPMPFEPLTEPLSLQQLAR 872 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNA------LVEQDD 893 F +PV+AFF+ RL V F E D E F L+GL R+ + L++ + Sbjct: 873 FLKNPVKAFFRTRLDVVF-DELQTQDDDEVFALDGLDRHSLLSHLIDDPQAAVYEGIEAA 931 Query: 894 AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV-------------IACRQPGQS 940 R R+ + +G LP A G + QE L A Q Sbjct: 932 VARRVRQLQGSGALPMRALGSRVAQGLEQEALPLLRSWSELAQAYPQAVDKRALIVEHQD 991 Query: 941 MEIDLACNGVQITGWLPQVQPDGLLRWRPSL--LSVAQGMQLWLEHLVYCASGGNGESRL 998 + +D +G++ G P R + + W+ + A G+ L Sbjct: 992 LRLDDWLDGLRTGGQSPIWMQLNASRLSDGKAQARAEKLIDAWVRQMAASA-CGHAVQGL 1050 Query: 999 FLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAML 1058 + D P L +A +L L+ ++EGM PL + A LK Sbjct: 1051 LIGADARVDLPSLPPAEARDHLHTLLAAWQEGMRRPLPFTARTALAELKNRKG------- 1103 Query: 1059 DDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETME-AIVEQSQRFLLPLF 1117 + YEG GE ++ R + + + PL Sbjct: 1104 -------------QEVYEGGYCTSGEVEEPCLARTFPDFASLSADGRFETYLAELFRPLA 1150 Query: 1118 RF 1119 + Sbjct: 1151 DW 1152 >UniRef50_D0IXL5 Exodeoxyribonuclease V, gamma subunit n=4 Tax=Comamonadaceae RepID=D0IXL5_COMTE Length = 1195 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 348/1195 (29%), Positives = 534/1195 (44%), Gaps = 120/1195 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L H N+ + L + + L EPE++LVQS GMA+W +M ++++ G+ A Sbjct: 20 LIAIHGNQTEALADTVLAWLAAHPLQA-LEPEIVLVQSNGMAEWFKMRMAEQQGVCAAAQ 78 Query: 62 FPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 LPA F+W + ++L E+P+ES +K M W+LM LLPQ L F + ++L Sbjct: 79 VELPARFVWRSYRQILGRHEVPRESPLDKTPMIWRLMRLLPQCLGEPAFAPIANFLR-PG 137 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEAQAWQAPLWKA 171 + ++L QL+ K ADLFDQY +YR DWLA WE G V + E Q WQ LW+ Sbjct: 138 EPQRLLQLAEKLADLFDQYQIYRADWLAAWEKGEDVLRTAGRPDAPVPEGQLWQPQLWRK 197 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 ++ + + R L R ++ L+S L RV + G+S +P +Q L + Sbjct: 198 VLAELDEQ-ERAATRPALLARILDALQSGQPPVTPLARRVVVFGMSQMPLSLMQFLSGIA 256 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 +H ++ + NPCR++W D D L + R+ Sbjct: 257 QHSQVLIAVPNPCRFHWADAIDGRELLRQQRRRHA-----------DKGGKDLAQIPLAA 305 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTP--------------DNLLHN 337 +PLLA+WG+ RDY+ L +++ ++ LL Sbjct: 306 MHAHAHPLLAAWGRQSRDYVRQLDAFDTTGDIAVQWGWPRVDVYDEADASELIDAPLLVQ 365 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 +Q I +L + + D SI FH H RE+EVLHD+LL L Sbjct: 366 VQQRIRDLVPMSEH-----------PAVEIAAADQSIVFHKAHGLVRELEVLHDQLLQWL 414 Query: 398 EEDPT-----LTPRDIIVMVADIDSYSPFIQAVFGSAPA--DRYLPYAISDRRARQSHPV 450 E L PR+++VM+ I+ +P I+AVFG R++P+ I+D AR S P+ Sbjct: 415 AEPAAAGRAVLAPREVVVMLPSIEEAAPAIRAVFGQYGRHDARHIPFDIADVGARASSPL 474 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 + A LL LP R ++ LLDVP +AAR + + L L W+ +GIRWG++ Sbjct: 475 VTALQWLLKLPQQRCRLSELCDLLDVPAVAARVGLAADDLPQLTHWMAGAGIRWGLNHAQ 534 Query: 511 VRELELPAT-GQHTWRFGLTRMLLGYAME-------SAQGEWQSVLPYDESSGLIAELVG 562 +L L A ++ FGL RMLLGYA + + PYDE GL AEL G Sbjct: 535 RAQLGLAACGDPNSAWFGLRRMLLGYASGPALEAAFDEAQVFAGMEPYDEVGGLTAELAG 594 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM-TLIEQQWQAIIA 621 LASLL ++ W + A E W R +++ FF+ + + A+ ++ A Sbjct: 595 SLASLLGRMLQWWQTAATAAAPEVWAQRFRSLMDDFFVAQGDEDQALCAALDTALVGWQA 654 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 A + +PL + ++ Q L + ++QRF AG V CTLMPMR+IPF+VVCLLGMN Sbjct: 655 ACEQAGFEALIPLEVAQEAWLQALSEPALNQRFRAGGVTFCTLMPMRAIPFEVVCLLGMN 714 Query: 682 DGVYPRQLAPLGFDLMSQ--KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 DG YPR+ + FDLM+ + + GDR+RRDDDR L L+AL+SA+ KLYIS+ GR ++DN Sbjct: 715 DGDYPRRATRVDFDLMALPGQQRPGDRARRDDDRQLMLDALLSARSKLYISWAGRHVRDN 774 Query: 740 SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE- 798 SE+ PSVLV +L DY+ Q L+ E + A T H PF ++ Sbjct: 775 SEQPPSVLVSQLRDYLRQGWQGEDSAGLSASERGELLLAQRTRQHPLQPFSRSYFEQASG 834 Query: 799 RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFR 858 ++AREW A + V + L L F HP R+F + RLQV F Sbjct: 835 LSTFAREWYGAHEERAAQVLPVVAAFEPDPEVPLTLARLTEFLRHPARSFLRNRLQVRFE 894 Query: 859 TEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF----------RRFRAAGDLP 908 ++ + D E F ++GL+ Y + QQL + Q + + AG LP Sbjct: 895 QDEELLEDDELFSVDGLTAYGLIQQLQQGVRTQLAHDAELDVGLQVQRQVQCLGRAGVLP 954 Query: 909 YGAFGEIFWETQCQE----MQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ---- 960 G E + + ++ + L V + W+ +Q Sbjct: 955 LAGLGRREAEVLQAQATPSLLAWQQQMRLWPHAAPRERLLLHSGAVTLDDWMDGLQEREE 1014 Query: 961 --------------PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEW 1006 L + L + + +++ L ++G + + +D Sbjct: 1015 PSSDAGHSRCWFALEPRTLLNKKGELQAHKLLPIYVRSLALSSTGSDTLMGVI-ARDTLV 1073 Query: 1007 RFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQK 1066 PL E A L L++ + G + PL + ++ A + Sbjct: 1074 WVQPLEPEAATQRLQALMQLWLTGQNEPLPLPLKAAIA------------------AGRD 1115 Query: 1067 ARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETME-AIVEQSQRFLLPLFRFN 1120 QAYEG M+ GE +D + R + T + +++ PL + Sbjct: 1116 ELNAAAQAYEGGYMLGGECEDPSWARCYPDWEALTADLRFHVLAKQVYGPLHDWL 1170 >UniRef50_C3X2X1 Exodeoxyribonuclease V n=2 Tax=Oxalobacter formigenes RepID=C3X2X1_OXAFO Length = 1129 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 304/1179 (25%), Positives = 504/1179 (42%), Gaps = 127/1179 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML + SNR DVL + + F E ++V S + + L + ++ G+ A + Sbjct: 12 MLNLNLSNRFDVLLQTFCENLAKRP-ATVFTAEQVIVPSAAIKRKLMLAIADTAGVCAGV 70 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +F A ++W + + E+P+ S F+ +SW+++ LL + + + YL+ D Sbjct: 71 EFSFLAQWLWRQIGKFV-EVPETSPFSSSVLSWRILRLLEEPGFAAPYPRIAGYLSRC-D 128 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLG----------EAQAWQAPLWK 170 + F L+ + A LF+QY++ RP+WLA W G VE + E QAWQA LW+ Sbjct: 129 EIMRFDLACRIASLFEQYVLSRPEWLAAWSKGETVEIVRKGHPKQAVAGEDQAWQAALWR 188 Query: 171 ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPP-GLPSRVFICGISALPPVYLQALQA 229 + E T L + +RF++ LE+ LP RV + ++ P ++ L Sbjct: 189 KIAEETGTLEEEPA------ERFLKMLETGGEEMAARLPERVHLFLEPSVAPYHVGILNR 242 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 LG+ ++I L NPCR YW +I D LA L RQ+ Sbjct: 243 LGRWMDIELYVVNPCREYWFEIVDSRRLAWLSKRQK------------------------ 278 Query: 290 DGEQDVGNPLLASWGKLG-RDYIYLLSDLESSQE-----LDAFVDVTPDNLLHNIQSDIL 343 D + GN LLASWGK LL+ LE + P+ LL +Q IL Sbjct: 279 DLYHETGNRLLASWGKESRASLESLLARLEPVGRENDGFISCAERARPETLLSRLQDAIL 338 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 +L ++ D S+ H+ HS RE+E+LHD+LL Sbjct: 339 DLTELEAGSLSHL------------GRDGSLEIHLAHSRTREIEILHDQLLRRFASGDPP 386 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 P DI+V+ D+D +P I+AVF + +PY I+ R+ + +PV A + LL+L S Sbjct: 387 GPGDILVVSPDLDEIAPMIEAVFSHNRSAPQIPYVITGRKDSRINPVSRALLDLLALASS 446 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 RF + V+ +L +P + A F L +R W+ ++GI W ID + RE LP H+ Sbjct: 447 RFTAAGVIDVLMLPEIGATFGFGG-DLDKIRGWLGDAGICWAIDGAHKREFGLPEEDGHS 505 Query: 524 WRFGLTRMLLGYAMESAQGE-WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 + GL R+ L YA+ + + LP ++G A +G L + + +R L+ + Sbjct: 506 FHDGLHRLFLAYALPDGRRVPFADRLPAGHAAGTQAAGLGQLWRFVEAVRQLKRDLSHPK 565 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 W +L+AF ET A + + + A + R L Sbjct: 566 TAAGWWQTWHGILDAFVTVTPETLEADREVRMRIAGLRDAMTQAGEAFETGFIIARHALE 625 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 + L+ AG V + +R++PF V ++G++DGVYP ++ FDL+ P+ Sbjct: 626 RALEGAGQGSV-PAGVVTFAPMDSLRNLPFGHVYVIGLDDGVYPAEVRQQEFDLIRLAPR 684 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 +GD + D+ +FL+ ++SA + LY+S GR+I+DNS + PS+L+ EL++ + P Sbjct: 685 KGDCLPHETDKNVFLDLVLSAGKSLYLSCTGRNIRDNSPKPPSILIAELLEVL-----EP 739 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNY---QPGERQSYAREWLPAAS-------- 811 E+ + L H PF P + S+ + A + Sbjct: 740 ALAEKTDGEARLAAREKLLVEHPLQPFSPDYFNGRADERMVSFRSDLCDALNLKKEKINI 799 Query: 812 ---------------------QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQ 850 AG P V L+ L RF+ HP R + Sbjct: 800 KEELEYDTSEDGLDNDIGDELAAGTPFFRAPLAFPDASWRDVLLDDLIRFFCHPNRYLMR 859 Query: 851 MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYG 910 RL ++F ++ E+ EPF ++ +R ++ +LL ++ E + R A + P G Sbjct: 860 SRLGLDFPRKEKELASDEPFTVDRTARRRLADRLLPLYLDGMAPEDIARSAAAGNEFPAG 919 Query: 911 AFGEIFWETQCQEMQQLADRVIA------CRQPGQSMEIDLACNGVQITGWLPQVQPDGL 964 A G +++ E+ A + A +++E DL +++G L V+ GL Sbjct: 920 AMGAQQRQSELMELSAFAQALSADLKTGFVAPVSRTLEFDLGGEIWRLSGSLSDVRKTGL 979 Query: 965 LRWRPSLLSVAQGMQLWLEHLVY--CASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQ 1022 +R+R + + W+EHL CA G S ++ +DG+ P +A L Sbjct: 980 IRYRYDEGAPRDYLAAWIEHLFLNACAPEGVALSSVWHFRDGKTVLEP--YGRARAVLRD 1037 Query: 1023 LIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVR 1082 L++ YR G++ PL P S ++++ KA + A + R Sbjct: 1038 LMDIYRTGLNRPLHFFPRSAWEFVQS------------GGHAGKANGIWRPA---DGSRR 1082 Query: 1083 GEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 GE D + R + + R PL + Sbjct: 1083 GESADAFNWLAMRGVREPLDADFAALANRVFGPLLAHMK 1121 >UniRef50_P57528 Exodeoxyribonuclease V gamma chain n=4 Tax=Buchnera aphidicola RepID=EX5C_BUCAI Length = 1070 Score = 501 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 305/1118 (27%), Positives = 570/1118 (50%), Gaps = 51/1118 (4%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +Y SN L+ L I+E + + FE E+ + + + Q+L + +++K GI+AN Sbjct: 1 MFTIYKSNSLNTLLLKAYHIIEEKPFSNIFEKEIFIYDNKVLFQYLNIFIAEKKGISANF 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 F P FIW +F +L + ++ F + W+++ +L E+ + D Sbjct: 61 KFYHPNDFIWKLFKIILSKKELKNIFTHSMIIWEIIKILDNKKFFENCSK-------KKD 113 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 K F+ S A +F +Y++YRP+W+ QWE + + + WQ LW ++ T ++ Sbjct: 114 MIKKFKFSFLMASIFKKYILYRPEWINQWEIEKNISIFDKNEQWQIKLWMEIIHNTKKIN 173 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 Q H ANL+ + ++ LP R FI ++ P Y++ Q + + +I+ L+ Sbjct: 174 QSSDHFANLFYNIQKIIKEKKIKKKYLPKRFFIISSFSMNPSYIKIFQNISIYTDIYFLY 233 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 P + + F + + + + L+ Sbjct: 234 ITP--------------------------FKKNIFNFIQDNKIFTDIKIEKKNILNDSLI 267 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 WG+ Y + + + ++ ++ F +LL I+++ + Sbjct: 268 TLWGQYEEIYYFYILKSKKNKVINCFKKNKNKSLLSQIKNNFFN------------DSEF 315 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + KR L+ D SI+ ++C + + E+EVL+++LL L E+ ++ P DI+V +D+Y Sbjct: 316 TRKKRFLEISDHSISINICFNKKNEIEVLYEKLLIFLNENSSIKPGDIVVTSFSLDTYIS 375 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 I +F S + +P+ I+ + ++ + +L +F +L+L +SRF +E++L LLDVP +A Sbjct: 376 SINLIFQSIDNKKTIPFFIAKKSSKTTEIMLWSFKKILNLSNSRFENEEILELLDVPEIA 435 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 +F+ +EE ++ L W+ E+ IRWGI++ + L P Q+TW +G+ ++LL YAM Sbjct: 436 EKFNFSEEEIKILYHWIEETNIRWGINEKHKNYLLFPKNKQNTWFYGIEKLLLSYAMNDT 495 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + W VL +G +EL+G L S + L W++ L++ + L W + D+++ FF Sbjct: 496 EKIWNGVLSCSFINGSRSELIGKLISFIKILEKWQKKLSKLQYLTYWRSLYSDLVSDFFQ 555 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 + + E ++ +I+++W II + L + Y + +++L+ + + + FL G VN Sbjct: 556 NNTKIEKSIQIIQKKWIEIIDDSLSSNYLKKISINILKKIFFYKY-YDNNHEIFLPGVVN 614 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 C + IPFKV+C++G + P+ F+L+ + P GD + YLF+++L Sbjct: 615 FCYPDSVCYIPFKVICMIGTDHTSIPKTNYLDNFNLLKKYPLIGDINLYQKYSYLFVQSL 674 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 A++ YISYIG S++D S+ PS+LV +L++YI + GD+ L+ E+ ++ +L Sbjct: 675 SCAEKYFYISYIGYSVKDESKVHPSILVDQLLNYITLNFCFIGDQNLSYKENSKKITKYL 734 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 H + F Y+ +S+ ++ + + + + L + L+ L F Sbjct: 735 CKKHKKQFF----YETKNIESFIQDDIKNDFKHTEKNISHKNLLKKNTDNEINLKDLINF 790 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR 900 W HP+R F+ L++ R + +I TE F++ L+ ++I +LL+ ++ + +L++ Sbjct: 791 WKHPIRYFYNSHLKIKIRQKKQKINTTETFLVNPLNSFKIKNKLLDYIIHNKNITKLYQH 850 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ 960 + +G LPY FGEIFW +EM+ +A++V+ R + +I+L QI G L ++Q Sbjct: 851 YLLSGKLPYHFFGEIFWIKNIKEMKLIANKVMQYRIEKEEKKINLNIEKYQIYGVLSEIQ 910 Query: 961 PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL 1020 GLLRW+ S + + + LWLEHL+Y GG G+S++ K W F L + +A YL Sbjct: 911 STGLLRWKTSSIRYSDRIALWLEHLIYSILGGCGKSKIIGYKSQIWSFSSLNSHRAHSYL 970 Query: 1021 SQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMM 1080 + I+GY +GM PL L +SG +WL YD +N+ + +D T KA K L ++G+ Sbjct: 971 LEYIKGYIKGMKEPL-FLTKSGASWLDQVYDERNNCIKNDYYTKIKAYKKLLYTWKGDNY 1029 Query: 1081 VRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 GE +D + ++ + ++ I E ++++L+P+ + Sbjct: 1030 TEGEQEDYYLKKTITISNKKNIKKICESAEKWLIPILK 1067 >UniRef50_C4ZM87 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Thauera sp. MZ1T RepID=C4ZM87_THASP Length = 1218 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 352/1230 (28%), Positives = 532/1230 (43%), Gaps = 155/1230 (12%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 H NR++ L + + + L P E E+ILVQS GMA+W++M ++++ G+ A Sbjct: 18 FIALHGNRIETLLDTVAGWLAQHPLA-PLESEVILVQSNGMAEWVKMAIARRAGVCAAAA 76 Query: 62 FPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 LPA F W + +VL +P S +K +++W+LM LLP++L F + YL D+ Sbjct: 77 VQLPARFQWQTYRQVLGRAQVPARSPLDKTALAWRLMRLLPEVLAEPGFAPVAGYLADN- 135 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL------------------------V 155 D + FQL+ + ADL+DQY V+RPDWL W G Sbjct: 136 DPGRRFQLALRIADLYDQYQVHRPDWLDAWGEGREALPDAGRGETPLTGRGETPLAGRGE 195 Query: 156 EGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLP-----SR 210 L E Q WQA LW+ +V+ Q R L+ R + L++ P R Sbjct: 196 TPLPEDQRWQARLWQRVVDELDPQ-QRALTRPQLHDRVLAALDAIAEDAALHPAAALPRR 254 Query: 211 VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFE 270 V + G++ +P LQ L AL +H ++ L NPCR++W DI D ++ R++ Sbjct: 255 VVLFGMTHVPLPTLQLLAALSRHAQVLLAIPNPCRFHWADILDGREWLRIARRRQ----- 309 Query: 271 DRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ--------- 321 Q D +PLLA+WG+ RD++ L + ++ Sbjct: 310 ------PLRDGRELQDVGLDAMHLHAHPLLAAWGRQARDFVRQLDAFDDAEQTRARFPLA 363 Query: 322 ELDAFVDVTPD------NLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSIT 375 +D F D LL +Q I +L A P+ D SI Sbjct: 364 RIDLFDDDQDTHDVAQPTLLVQVQRHIRDLTPLAEH-----------PHPPVPAEDRSIV 412 Query: 376 FHVCHSPQREVEVLHDRLLAMLEE---DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 FH+ HSP RE+E+LHD+LLA+L D L PRDI+VMV ID ++P I+AVFG Sbjct: 413 FHLAHSPVRELEILHDQLLALLARPPGDKPLRPRDIVVMVPSIDDFAPAIRAVFGQYGRH 472 Query: 433 --RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 R++P+ I+D AR S P++ A LL + R D+ ALLDVP +AARF + EEGL Sbjct: 473 DPRHIPFDIADLSARASSPLMGAVEWLLRIRHDRCRLSDLGALLDVPAIAARFGLAEEGL 532 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPAT-GQHTWRFGLTRMLLGYAMESA----QGEWQ 545 L W+ +GIRWG+D + L L A Q++ FGL RML+GYA + + Sbjct: 533 PRLTGWMRGAGIRWGLDARHRAGLGLQACGEQNSALFGLRRMLMGYAAGRSEVTTDAPFA 592 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 + PYDE GL AEL G LA L+ +L W+ + W R +L +T Sbjct: 593 GIEPYDEVGGLDAELAGALAHLVERLIRWQADSRRPATPAAWTQRLRALLADLVRAVDDT 652 Query: 606 EAA-MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 + + ++ + + A + +PL++ + L+ + +RF AG V CTL Sbjct: 653 DRQTLAALDDALERWLEACDEAAFEAELPLAVAAEAWLAALESPALDKRFRAGGVTFCTL 712 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ--KPKRGDRSRRDDDRYLFLEALIS 722 MPMR+IPF+VVCLLGMNDG YPR+ FDLM+ + + GDR+RRDDDR L LEAL+S Sbjct: 713 MPMRAIPFEVVCLLGMNDGDYPRRSPRSDFDLMALPGQQRPGDRARRDDDRQLMLEALLS 772 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 A++ LY+S+ GR+++DNS + PSVLV +L DY+ + Sbjct: 773 ARRVLYLSWCGRNVRDNSVQPPSVLVAQLRDYLAAGWSPAVVAERTVEHPLQPFSRRYFE 832 Query: 783 L-HTRMPFDPQNYQPGERQSYAREWLPAASQA--------------GKAHSEFVQPLPFT 827 + + + + + +P+ G+A S + P Sbjct: 833 PGTPLLTYAREWRAAHVEAAAQDDAVPSHDGQANREATGRATRPTRGEAASPPLPPFVPD 892 Query: 828 LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL--- 884 + + L F +PV+ FF+ RL V + D +PD E F +GL + + ++L Sbjct: 893 PAVPLTIAALAAFLRNPVKVFFRERLGVVYEDVDEALPDDEAFGFDGLEEHGLVEELAAA 952 Query: 885 ------------LNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI 932 L+A + E R AG LP G G + + L Sbjct: 953 VLADLALLPPPELHAFALEAAVEAQLGRIERAGRLPIGGLGLRARAALGEAVLPLLRAWR 1012 Query: 933 ACRQPGQ----SMEIDLACNGVQITGWLPQVQPDGLL---------------RWRPSLLS 973 R + A G + WL L Sbjct: 1013 LVRASHPLDAERGNLRFAHAGALMEDWLDHRVRADEHALPSWLAHDPGRLLEDADKGTLR 1072 Query: 974 VAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSA 1033 + + W+ L A+ + L + +D P A L++LIE + G+ Sbjct: 1073 PWRLLLPWVRSL-LAAAADSPSGGLLVGRDATVHIVPTDPAVARALLARLIEAWIAGLGE 1131 Query: 1034 PLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRL 1093 PL V + A + A +AYEG+ RGE ++ R Sbjct: 1132 PLPVAARTALALVGEGKPA--------------------EAYEGSEHRRGEVEEASLARC 1171 Query: 1094 WRQLTPETME-AIVEQSQRFLLPLFRFNQS 1122 + + ++ PL + S Sbjct: 1172 YPDYAALIEDGRFEHLARALYGPLLEWMDS 1201 >UniRef50_C1SHH5 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHH5_9BACT Length = 1038 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 269/1129 (23%), Positives = 484/1129 (42%), Gaps = 102/1129 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML++Y NRL+ L M+ + P I +Q+ GM +W+ + L++ GI+AN+ Sbjct: 1 MLKIYTGNRLERLLEKMDMNICSAGSG-PLTKVPICIQTPGMQRWIGIKLAELTGISANL 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAF-NKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 DF P + + + +++ + K + WK+ + L L + + +R+YL D Sbjct: 60 DFIFPGALMKRLA---GVGAGEKAPWPEKNELVWKVYSKLNSLPSEQFYEHIRNYLEGDI 116 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA-WQAPLWKALVEYTHQ 178 + + ++L+ + AD+FDQY VYRP + W + E WQ L++++ Sbjct: 117 NGIRAYRLAGRIADVFDQYQVYRPQMVLDWLSVKPKNPPVEDNDIWQMELFRSIF----- 171 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 + ++ +FI+ P L + + I GIS LP +++ L+A ++ +I+ Sbjct: 172 -PHGSGCKTTIFDKFIKNCTKGANNCPALKTPIHIFGISVLPAFFIEMLKAASQYTDIYF 230 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 +P R YWGD K +L E Q + + + Sbjct: 231 YLLSPTRQYWGDSKTIREKRRL--------------------EKITQKSAEELYIEEKHE 270 Query: 299 LLASWGKLGRDYI-YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 LL + G +GRD+ YL +S + + D+ +++L +Q++IL+LE Sbjct: 271 LLDNLGVIGRDFFDYLFGSDDSFLTEEEYFDIAKNSVLQTVQAEILDLEYGNEK------ 324 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 D+SI + CH+P RE+E L+D+LL + D TL P DI+VM DI+ Sbjct: 325 ----------PSHDNSIIINNCHNPLREMETLYDQLLELFNNDQTLRPSDILVMTTDIEK 374 Query: 418 YSPFIQAVFGS-APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y+P+I+AVF + +PY+I+D +Q++ F+ LLS F DV+ +L Sbjct: 375 YAPYIKAVFDNPYSERERIPYSIADVSEKQTNRPAGIFLELLSTLRGDFSLADVMRILSY 434 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 ++A +F I L L + +G W +++R+ L TW L R+ LG A Sbjct: 435 DLIADKFSIKRSDLSTLSTMLQNAGAMWSYGREHLRKEGLTIDDTFTWERALRRVALGLA 494 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 S+ + ++ +G L + + + E+ + EW + + + + Sbjct: 495 EGSSGSIYSE-AAVKNVPFSLSVQIGGLMRFADLSSKYAEQMDSEKTIPEWCALMQALAD 553 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 + + + + + I E + +AVP + + + L + L + R ++ F++ Sbjct: 554 DYIKETFDNADDILHLSKCIADINTEAENGDFTEAVPAAPVLERLTESLSETRGAKGFIS 613 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 G V C ++PMRSIPF+V+C+ G+++ +PRQ L FDLM++ PK GDR+ RD DRYLF Sbjct: 614 GRVTFCAMLPMRSIPFRVICVAGLDENTFPRQKVSLEFDLMAKSPKPGDRNNRDSDRYLF 673 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 LE LISAQ L +SY G+S +DN+E PS L+ EL ++ + Sbjct: 674 LETLISAQDTLILSYTGQSERDNAELLPSTLITELNTHLKGRFGIED------------- 720 Query: 777 KAHLTCLHTRMPFDPQNYQPGERQSYAREWL---PAASQAGKAHSEFVQPLPFTLPETVP 833 +T F + + +Y+ + A S H P+ +P+ V Sbjct: 721 ---ITLKQKLHSFSRDYFSNEKLFTYSSDKYNTSRAFSSEKTGHRFSTLPIEVQMPDEVS 777 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD 893 L + F+ P F + L++ + D +P+ E + L +Y+I L +E D Sbjct: 778 LADFENFFISPPDYFLRKVLEIRPKLRDESLPENEIMCPDPLLQYKIIDNALRERLEGKD 837 Query: 894 AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP-GQSMEIDLACNGVQI 952 + LP G + +L V + +ID A +G+ I Sbjct: 838 PDNALEYLYKTAQLPPENLGRLSITETLNTSMELNRTVTETLGGTPEEQKIDSAIDGLHI 897 Query: 953 TGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLA 1012 +G + V + + +P+ + ++ W+ HL+ C + PP Sbjct: 898 SGTIFGVSGNRYVYAKPASIKPKDIIRGWIRHLLLC--QKASITTTLCGGGNTVEIPPAD 955 Query: 1013 AEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFL 1072 + +L+ L+E ++EG +PL G L + +S Sbjct: 956 S----GHLNNLVEIFKEGHKSPLRFHITDGIRELNDRVLKSSFLEDSHNSVAS------- 1004 Query: 1073 QAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 D ++ + T +A +++ + PL + Sbjct: 1005 --------------DYAFRICFGADTTLDRDA----AEKIINPLLLTLR 1035 >UniRef50_Q480N8 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Colwellia psychrerythraea 34H RepID=Q480N8_COLP3 Length = 1198 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 318/1201 (26%), Positives = 543/1201 (45%), Gaps = 150/1201 (12%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M+ +Y +N+++ L L+ + + F E+I+VQ+ GM WL + ++Q+ GI+ N+ Sbjct: 1 MIHLYPANKMENLL-LLLNKISQLSPLGVFNQEVIVVQNAGMQHWLNLAIAQERGISMNM 59 Query: 61 DFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLL--PQLLEREDFTLLRHYLT 116 + LPA F+W + + + +P++S ++++ + W++ LL ++E +DF+ HY Sbjct: 60 RYALPAQFLWKLIRSLASDEKVPEQSPYSREVLCWRIHALLALDSVVEDDDFSQATHYWR 119 Query: 117 DDSD---------------KRKLFQLSSKAADLFDQYLVYRPDWLAQWETG----HLVEG 157 ++ + K +QL+++ ADL++QYL++RP WL W+ G +E Sbjct: 120 GENTTDEEDNNTVNDSKHAQLKRYQLATQLADLYEQYLIFRPQWLDNWQQGNFELDGLEK 179 Query: 158 LGEAQA-WQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGI 216 + ++ WQ LW+ L+ H + + + +P R+ G+ Sbjct: 180 ISASEHKWQGKLWRLLIAQLPYNPVELMH---------DAIANIQDKKELIPPRISFFGL 230 Query: 217 SALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL 276 + + P++L + AL +H+E+H NPC YWGD+ Y L++ + Sbjct: 231 NTMAPMWLNFINALSEHVEVHFFHLNPCFSYWGDVVTEKYALNKLSQWSDGVLPEELDV- 289 Query: 277 FRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFV--------- 327 VGNPLLA+ G+ GR++I +L D + +++ F Sbjct: 290 ---------------HSYVGNPLLANLGQQGREFISMLQDYSTI-DVELFEQAKSAQAIS 333 Query: 328 -DVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREV 386 + ++LH +Q+DILEL + D SI CHS REV Sbjct: 334 NNNDVTSVLHQLQNDILELSDA-------RSPDDEAITPKAVQHDDSIVITSCHSALREV 386 Query: 387 EVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS-----APADRYLPYAISD 441 + LHD LL +D +LTP+DI+VM I+ Y+P++ AVF A LP +I+D Sbjct: 387 QALHDYLLHQFNQDKSLTPKDILVMCPQIEQYAPYVNAVFTRGWQDIAGEVPPLPCSIAD 446 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 R A+ S P++ AF LL+LPDSRF +L+ L +P +A F I E L + W+ ++ Sbjct: 447 RSAKDSDPLVAAFTELLTLPDSRFGVSQLLSFLRLPAMANNFSINGEDLAKISAWLEQAT 506 Query: 502 IRWGIDDDNVREL-ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 + WG+D + + L A TW+ GL+R+L G+A ++ +Q L G + L Sbjct: 507 VHWGLDLTHKQSLLGQQANASFTWQQGLSRLLRGFAYADSEQIYQQQLLLSNVEGSDSIL 566 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET----EAAMTLIEQQW 616 +G L + QL+ + L + R +W + L+ F E ++ +IEQ Sbjct: 567 LGQLMLFIEQLHYFSENLQRSRTAIQWQTFLLEQLSHLFSRVDADNVSNENSLMVIEQAI 626 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 ++ A + D + L ++ D L+Q Q S++F+ G V C+++PMRSIPFKV+ Sbjct: 627 AGLVEHCHHAHFEDDISLLIVVDYLSQHFSQGDASKQFMVGQVTFCSMLPMRSIPFKVIA 686 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQ-KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 +LG+NDG +PRQ LGFDLMS K K GDRSRR DDRYLFLEA+IS++ LY+SY GR+ Sbjct: 687 VLGLNDGEFPRQRQALGFDLMSLSKAKLGDRSRRGDDRYLFLEAIISSRNSLYLSYQGRN 746 Query: 736 IQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC-----DESEARVKAHLTCLHTRMPFD 790 I++N+E+ PS++V+EL++Y+ Q + E D++ A F Sbjct: 747 IKNNNEKQPSLVVKELMEYLAQGYGWQFSEEQLTSDNNNDDTNAESNQSGIYQLAMQAFS 806 Query: 791 PQNYQPGERQSYAREWLPAASQAG------------KAHSEFVQPLPFTLPETVPLETLQ 838 P NY+ G S+ WL + A T+ ++ + L Sbjct: 807 PNNYR-GTWPSFDANWLALGQSSNSDNDESMGEGSTLAIESLAVTPEQTVEVSLSCQQLI 865 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDA---- 894 RF+ HP + F Q +L + F D + D EPF + L Y + Q LL+A + Sbjct: 866 RFYQHPAKMFAQQQLNLYFENHDVLLEDVEPFSVNHLQSYLLRQDLLSAALTGTIESPSN 925 Query: 895 ----ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSM---EIDLAC 947 E++ R +G P ++ ++QQ ++ + + + L Sbjct: 926 KDGSEQVITRAHLSGKFPDLPTTTNLFKDYQLDVQQFSEEISKVNCENPELIDCNLVLDI 985 Query: 948 NGVQITG-----------WLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGES 996 +G ++ G V+ + L+ +R S ++ + LV + Sbjct: 986 DGTEVDGPSAQKIRVSLNTKLAVKNNLLVHYRSSSAKAKDKFVMYFQQLVVQVWQDQAIA 1045 Query: 997 -------------------RLFLRKD--GEWRFPPLAAEQALHYLSQLIEGYREGMSAPL 1035 L+ +F A L L++ + +G L Sbjct: 1046 NETNITDDNQRLQQVTETIGLYFNTKAQKVEQFNVANIADAKSKLINLVKMFFKGQQQVL 1105 Query: 1036 LVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR 1095 L+ G + + +++ +F + G+M RG DD + W Sbjct: 1106 LL----NGELADQVFTKKRGQLVEMTQA------RFEGLWIGDMSTRGLSDDDYLSYFWP 1155 Query: 1096 Q 1096 + Sbjct: 1156 E 1156 >UniRef50_Q1NSB7 Exodeoxyribonuclease V, RecC subunit n=3 Tax=Proteobacteria RepID=Q1NSB7_9DELT Length = 1155 Score = 489 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 339/1186 (28%), Positives = 524/1186 (44%), Gaps = 104/1186 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVE-----------RERLDDPFEPEMILVQSTGMAQWLQMTL 50 L +Y SNR++ L A +E + P E I+VQS GMA WL+ L Sbjct: 6 LLLYRSNRIEELLACLEAELAVASSAGSSAGSSAGSSAPLTAECIVVQSQGMAVWLEQRL 65 Query: 51 SQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTL 110 +++FGI AN DFP P F + VL +++S + L+ LLP+L +R +F Sbjct: 66 AERFGIWANPDFPHPRRFHQRLLQAVLGRQAVADFSHRESFTLALLALLPKLPQRPEFAP 125 Query: 111 LRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQ----AWQA 166 L YL D +D K QL+ K A LFDQY VYRP+ + WE G G A+ WQ Sbjct: 126 LARYL-DGADDWKCLQLAEKIAYLFDQYAVYRPEMVLAWERGEEQAGTAGAELADNRWQP 184 Query: 167 PLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQA 226 LW+ L P L + F + P LP R F+ I+ LPP+YL Sbjct: 185 LLWRRLSRQLGSPVAP------LTEAFASLRQGRLAAPELLPPRAFLFAITTLPPLYLNL 238 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 L + I IHLL +P R YW DI PA L ++ R + + P Sbjct: 239 LDQAARIIPIHLLLFSPAREYWADIFTPAALREMELRHSDAALLEEGEPAALHLSG---- 294 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDN----LLHNIQSDI 342 G+PLLAS G + R++ +L + Q + LL +Q DI Sbjct: 295 ---------GHPLLASLGTVAREFQDILEEQSDYQPATDGERFPENQENPGLLARLQQDI 345 Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 +L+ A + D S+ H+CHSP REVE + L L + Sbjct: 346 AQLKEPAAGEGEESQ---------PPTADDSLAIHICHSPLREVE-VLQDQLLQLLDGEE 395 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSA-PADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 +P DI+VMV DI++Y+P I+AVF R +PY I+DRR + +L+ + + Sbjct: 396 FSPHDIVVMVPDIETYAPLIEAVFNRPPGDRRRIPYRIADRRLSREGELLDTLLRFFEVA 455 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 R VL LL + + L+ + QW+ +S + WG+D+++ + PA Sbjct: 456 RGRLEVSAVLDLLAAEPVRRGLGLDGGQLQRIEQWLRQSRVCWGMDEEHRQHHGQPAQRL 515 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 +TWRFGL R+LLGYAM +A + +LP+ + G + G L +L + + Sbjct: 516 NTWRFGLDRLLLGYAMPAASDVFADILPHADIEGQESVTAGILLRFCEELFALVKLVQTP 575 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + + +W + + +L + DA ++ + +++E A + L L Sbjct: 576 QTIADWATISQRVLISLGGDDAASDWQELCLRDTLAQLLSEADQAALTRPLELPAFLRLL 635 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 RLD ++ FL G + C ++P+R+IPF VVCLLG+N+ +PRQ FDL++ P Sbjct: 636 RGRLDGAGGTRGFLDGGLTFCNMLPLRTIPFPVVCLLGLNNDDFPRQEPAADFDLLAAAP 695 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 + GDR RR DDR++FLE+L++A+++LYISY+GRS++DN PSVLV EL+ + Sbjct: 696 RPGDRCRRRDDRFMFLESLLAARRRLYISYVGRSLRDNRSLPPSVLVDELLTCLAAMS-- 753 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE--RQSYAREWLPAASQAGKAHSE 819 P N + RV A T H PF P+ +Q SYARE+LP + A + Sbjct: 754 PKAAGANDEAHRQRVAARFTVEHPLQPFSPRYFQNTAGPLFSYAREYLPPPASPDAAPAT 813 Query: 820 F-----------------VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 T + L L F+ HP + + RL + + Sbjct: 814 VSGPRAQLPAAADHDSVPPAAWMSTTSTAISLADLHDFFRHPAGWYGRRRLGLLPPQQQP 873 Query: 863 EIPDTEPFILEGLSRYQINQQ--------LLNALVEQDDAERLFRRFRAAGDLPYGAFGE 914 D +P L+ L RY+I + L + + + L+++ RA G+LP G + Sbjct: 874 AGVDRQPLELDNLDRYRIGSRLLQQPALLLPDGAAGEPPWQALYQQLRAGGELPPGRAAQ 933 Query: 915 IFWETQCQEMQQLADRVIACRQPGQSMEIDLAC---NGVQITGWLPQVQPDGLLRWRPSL 971 ++Q LA + + L + ++++G L Q LLRW PS Sbjct: 934 PALRELVADLQPLATFLAGNPGGKTLPPLVLDLALADNLRLSGELSQRATAALLRWSPSR 993 Query: 972 LSVAQGMQLWLEHLVYCASGG--NGESRLFLRKDGE-----WRFPPLAAEQALHYLSQLI 1024 S + WL+HL CA + + +D + F PL++E A L++L+ Sbjct: 994 ASAKLWLAGWLDHLALCAQAPEDQDWQTIMVGRDQQNGADIRIFRPLSSELARELLTKLL 1053 Query: 1025 EGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRG- 1083 + G PL P S ++ AQ ++ K QA+ G+ RG Sbjct: 1054 ALFVAGQQGPLPFFPRSAYEFVAKTMTAQEESQ------EAKGWQAARQAFYGDGYQRGA 1107 Query: 1084 --EGDDIWYQRLW------RQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 E D + + L+ E ++ PL + + Sbjct: 1108 PPESADFYVETLFFGPSGRSPAATELPPGFAATARLVYEPLLQNLE 1153 >UniRef50_Q6ANK2 Related to exodeoxyribonuclease V, gamma chain n=1 Tax=Desulfotalea psychrophila RepID=Q6ANK2_DESPS Length = 1056 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 303/1134 (26%), Positives = 488/1134 (43%), Gaps = 93/1134 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML ++ SN + L ++ I++RE + F E+ L+QS G+ + + L+ +F N Sbjct: 1 MLHLHISNHTEKLLEILAAIIKREGRANLFAREIFLIQSPGVERTVCQYLADEFKSWCNF 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 DF LPA + + + ++ + F Q+ W+L LL + + + + L+ Y++ + Sbjct: 61 DFLLPAGLLRKIASSLYVDL-ETDLFASQTTVWRLEALLRDI-DEDIYLPLKKYVSGEVA 118 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + K +QL+ + A LFDQY + RP LA+W G V + + WQ LW+ LVE Sbjct: 119 ELKRYQLAGQIAQLFDQYQLMRPSMLARWRLGQRVTE-EDCEIWQMHLWQRLVEE----F 173 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 H+ + + IETLE C LP R+F+ G+ + P++L+ LQAL E+HL Sbjct: 174 PAARHQGEILENIIETLEK-EECQRRLPRRIFVFGLHTMAPLFLKFLQALSSRTEVHLFL 232 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 +PCR YWG++ L R + + LL Sbjct: 233 LSPCREYWGEVGRGGDRLLSLEGIRDSGVDLSSYEEEEPQQ-----------------LL 275 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDV----TPDNLLHNIQSDILELENRAVAGVNIE 356 AS G+ GRD+ +L A +P +LLH +Q DILE AV Sbjct: 276 ASLGRQGRDFQQMLVASAGYSIDSALYQGLGAGSPPSLLHVLQGDILERGRLAVTAAR-- 333 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 D S+ CHSP RE+ VL D +L +L +D +L RDI+VM DI Sbjct: 334 --------------DDSLRIVSCHSPLRELAVLKDHILDLLYKDASLQLRDIVVMAPDIQ 379 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y+P I A+F + Y+I+DR Q + V+ F+ L+L RF +VL LL Sbjct: 380 EYAPLIPALFAD------IQYSIADRATGQRNTVMAVFLDYLNLFSGRFGWSEVLDLLRS 433 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 + ++F + E L++WV ESGIRWG+ + +EL LP +TW GL R+LLG+A Sbjct: 434 EHIYSQFSLGEGDFDLLQKWVTESGIRWGLSAEQRQELGLPPLELNTWLAGLQRLLLGFA 493 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 M A + VL Y + G A+ +G L L L + R L EW + + Sbjct: 494 MS-ADTMVEGVLAYSDIEGNSAQALGGLCEFLQVLQGGQELYTTPRLLHEWAELLQGDAE 552 Query: 597 AFFLPDAETE-AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 F + + + I Y + ++ L Q Q S FL Sbjct: 553 RLFGGEENSAHQELQQILAGLGRGREYQGVLLYSQPIAFQVVMAWLQQASAQVGSSAGFL 612 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 G + C+++PMRSIPF+V+CLLG+N+G +P+Q FDL++ KP+ GDRS R DDRY Sbjct: 613 RGQLTFCSMLPMRSIPFRVICLLGLNEGKFPKQDKQATFDLLASKPELGDRSPRIDDRYQ 672 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 FLEALIS + LY+SY+GRSI++N E PS + + + A Sbjct: 673 FLEALISVRDSLYLSYVGRSIKNNGEIPPS--------------VVLCELLDLLECKFAI 718 Query: 776 VKAHLTCLHTRMPFDPQNYQ-PGERQSYAREWLPAASQA----GKAHSEFVQPLPFTLPE 830 + PF + ++ + SY L A + G + E Sbjct: 719 KPEDIVVEQPLHPFSSKYFEGRADLFSYNENCLTLAQKIYGGGGGEERPWWSGNLGRPQE 778 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE 890 + L + F+ +P R F L++ DTE F GL RY + Q L+ L+ Sbjct: 779 NIYLADMVSFYKNPQRWFVSRSLEIRLGASSDLPDDTETFSASGLDRYLLEQGLVEDLLA 838 Query: 891 QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG--QSMEIDLACN 948 + ++ G P G G + ++ E+ + + + Q++ ID Sbjct: 839 GREVADIYHGLAIEGRWPQGTPGSLLFKKLLTELDEFTNSIRQIDPGPIIQTLPIDQRIG 898 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRF 1008 ++ G + ++ +G+ R + ++ WL HLV + + L + KDG +F Sbjct: 899 PYRLLGKV-ALRQNGIFLHRYANRKGKDLLEAWLYHLVAGRERPDIITWL-VCKDGVLKF 956 Query: 1009 PPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKAR 1068 +E+ L +E + G++ E+ A+ C Sbjct: 957 SEQPSEE---MLLLYLEHFAFGVNTLSSFQVEAAYAYSLHCQKKSKKTP----------M 1003 Query: 1069 TKFLQAYEGNMMVRGEGDDIWYQRLW-RQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 + +G++ G + + +LP++ + Sbjct: 1004 QVAEETLKGSVTK---GYEPELALAISGGVEEFLAGEFERYCIELMLPIWEYAD 1054 >UniRef50_B5JRL4 Exodeoxyribonuclease V, gamma subunit n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JRL4_9GAMM Length = 1150 Score = 485 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 380/1187 (32%), Positives = 564/1187 (47%), Gaps = 135/1187 (11%) Query: 13 LEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-----FGIAANIDFPLPAS 67 + L L P E+ LVQS GMAQWL++ ++ GI A F +P+ Sbjct: 1 MLKLAINWQAEHPL-PPLAEEVFLVQSNGMAQWLKLNIAADREDGGLGIQAGQRFEMPSR 59 Query: 68 FIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK---R 122 F+W + VL +P S ++K ++ W+LM LLP+L+E + F +LRHYLT D + R Sbjct: 60 FLWSAYRAVLGNDKVPTASPYDKATLQWRLMRLLPELVEDDAFRVLRHYLTSDDETVATR 119 Query: 123 KLFQLSSKAADLFDQYLVYRPDWLAQWET---------GHLVEGLGEAQAWQAPLWKALV 173 K +QLS + AD FDQY VYR DWL W G L WQA LW+ L+ Sbjct: 120 KRYQLSQQLADTFDQYQVYRADWLEDWAQQRDRLSRFGGQQARALPAEDHWQAQLWRRLI 179 Query: 174 EYTHQLGQPR---WHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL 230 + P R +++RFI+ L S LP R+ + G+S+LP L+AL A+ Sbjct: 180 DDIETDSTPSHSVLSRGQIHRRFIDALHSGRDYSAYLPPRITVFGLSSLPYQTLEALAAM 239 Query: 231 GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 G H ++ L+ NPC++YWGDI+ + A + + Sbjct: 240 GLHTQVMLMVHNPCQHYWGDIRQH-----------------------APTRQAVKDAVAA 276 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQE-------LDAF---VDVTPDNLLHNIQS 340 + PLLA+WG+ GRDY+ LL++ + ++ +D F D LL Q Sbjct: 277 EHSESEQPLLATWGQQGRDYLQLLAEFDQPEDYQQHFEKIDVFNSPADNASPTLLQQWQH 336 Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 I +L++ + + S D S+ FH CHS QREVEVLHD+LL E + Sbjct: 337 SIYDLQSLPEEKNILSKDSL--------EGDRSLRFHSCHSAQREVEVLHDQLLDAFERN 388 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVF-------GSAPADRYLPYAISDRRARQSHPVLEA 453 P L P+D+IVMV DI Y+P I+AVF G RYLPY ISD + ++P + A Sbjct: 389 PALRPQDVIVMVPDIQRYAPHIEAVFGLYKPRTGQERDPRYLPYTISDSSLKSANPTVNA 448 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 LL RF D+L LL+ P L RF + L+QW+ ++G+RWG++ + + Sbjct: 449 IEQLLHSDQLRFSLSDILGLLESPALQRRFGLENSDPSLLKQWLEQAGVRWGLNREQRAQ 508 Query: 514 LELP--------ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 +LP A +TW FGL R+LLGY+ E+ W + P S AE +G L Sbjct: 509 HDLPSESSEPSEALSANTWAFGLNRLLLGYSSEAR---WNGIEPSAPFSNSDAEAIGALW 565 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVC-RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 L+ L+ + + L + +W + +L F D + + + Sbjct: 566 RLINTLDGFSQSLQHAKTPSQWSQFIGQTLLEFFDSDDDSDAPLFDALNHALEQWLDACQ 625 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 A + DA+PLS++R+EL LD ++QRFLAG +N +LMPMR++PFK+VCLLG+NDG Sbjct: 626 RADFNDAIPLSMVREELLPALDDSGLNQRFLAGCINFASLMPMRAVPFKMVCLLGLNDGD 685 Query: 685 YPRQLAPLGFDLMSQKP--KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 YPRQ FDLM ++ + GDRSRRDDDRYLFLEA +SA++ LY+S++GRSI+DNS R Sbjct: 686 YPRQQPRQDFDLMRRREHYRPGDRSRRDDDRYLFLEAALSAREALYLSWVGRSIRDNSVR 745 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN---YQPGER 799 S+L+ +L D I L D + + +LT H P+ Q + Sbjct: 746 AQSILLAQLRDDIAARFQLDND-------AHPTLLEYLTLEHPLQANSPRYLDTLQSAQY 798 Query: 800 QSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRT 859 +YAREW + + + ++ + +T+ L L+ P F + RL++ F Sbjct: 799 FTYAREWFDEPRSSDRNTT--LKAIDSNEAQTLSLSDLRLLLRQPCDVFLRQRLKIAFDD 856 Query: 860 EDSEIPDTEPFILEGLSRYQINQQLLNALVEQ-------DDAERLFRRFRAAGDLPYGAF 912 D + D EPF L+GL RYQ+ Q LL + +R R+ ++G LP G F Sbjct: 857 GDDSVLDHEPFSLDGLDRYQLGQSLLEDGAQDLSPSGLNAALDRAKARWLSSGQLPPGEF 916 Query: 913 G----EIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN-GVQITGWLPQVQPDGLLRW 967 G E + + + ++ A QP I LA G + W ++ Sbjct: 917 GLTLIEQRLDDVADTLSRYREQSQALIQPLPPQAIVLADELGWTLEDWTRELASTASGTP 976 Query: 968 RP-------------SLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAE 1014 L + + WL HL + G L L ++G R P+ AE Sbjct: 977 HYYQINLTPGTLRSGRQLKYHRLLNDWLNHLAASSL-GYSLHTLILCEEGGVRISPMPAE 1035 Query: 1015 QALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQA 1074 QA HYL QLI YR ++ PL + E+G A+ T A+ + ++AR++ A Sbjct: 1036 QAAHYLKQLISAYRNALAQPLPIQLEAGCAYAHTLATAKANH-------EEQARSEAQNA 1088 Query: 1075 YEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 YE + + ++ LW E + + PL Q Sbjct: 1089 YESRLSASQQRCYASFEVLW-----EHSGEFLRWMETLYQPLVEHTQ 1130 >UniRef50_B1XZ24 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XZ24_LEPCP Length = 1294 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 362/1262 (28%), Positives = 535/1262 (42%), Gaps = 157/1262 (12%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L + H NRL++L + + L P E E++LVQS G+A+WL+M+L+Q+ G+ A Sbjct: 13 LLILHGNRLELLLETVLQWLAAHPLA-PLEEEVLLVQSNGIAEWLKMSLAQRVGVCAATR 71 Query: 62 FPLPASFIWDMFVRVLPEI--PKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD- 118 LPA F+W + +L P S +K ++W+LM +LP L R F L +L Sbjct: 72 VELPARFLWRCYRAMLGRAGAPARSPLDKGPLAWRLMRVLPALAGRPGFEPLAQFLAGPG 131 Query: 119 -------SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV----------EGLGEA 161 D + QL+ + ADL+DQY VYR DWL W G V L Sbjct: 132 GPTPDAAPDLPRRLQLAQRLADLYDQYQVYRADWLIDWAAGRAVLTNPCTGAAPVALDAE 191 Query: 162 QAWQAPLWKALVEYTHQLGQPRW---------------HRANLYQRFIETLESATTCPPG 206 Q WQA LW+AL+ + R ++ RF+ L Sbjct: 192 QRWQALLWQALIRDLGTTDADQPADAPAESAALAVLAGTRPAVHARFVAALAQDEAPQRP 251 Query: 207 LPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRR 266 LP RV + G S LP L+AL AL H ++ L NPCR++W D+ D L + R++ Sbjct: 252 LPRRVVLFGHSHLPAQTLEALAALAGHTQVILAVPNPCRFHWADMIDGRELLRSAHRRQ- 310 Query: 267 HSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ----- 321 + + +PLLA+WG+ GRD++ LL E Sbjct: 311 ----------PLRNGRDLGALDIADAHAEAHPLLAAWGRQGRDFLRLLDAFEEQLGGAEA 360 Query: 322 --------ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS 373 +D F D D LL +Q+ I + A + R D S Sbjct: 361 GALRGELPRVDLFDDEPGDTLLAQVQARIRDAVPLAEHAALNGPPLDAAAARQRAATDRS 420 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPT-LTPRDIIVMVADIDSYSPFIQAVFGSAPA- 431 I FH+CHS REVEVLHD+LLA L L PRDI+VMV D++ Y+P ++AVFG PA Sbjct: 421 IEFHLCHSAMREVEVLHDQLLARLAAAKGSLAPRDIVVMVPDVEVYAPLVRAVFGQYPAS 480 Query: 432 -DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 R++PY I+D R R HP+L A LL + + R + ++ L+DV LA RF + + L Sbjct: 481 DARHIPYDIADLRPRGHHPLLLALEWLLRITEQRCTASELRELIDVAALANRFGLEGDDL 540 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPAT-GQHTWRFGLTRMLLGYAMESAQ-----GEW 544 L +W++ +G+RWG+D ++ L+L A +TW FGL RMLLGYA+ W Sbjct: 541 PTLGRWLDGAGVRWGLDAEHRASLDLAACGEANTWAFGLRRMLLGYAVGDDPAATPGEPW 600 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 + PY E GL A + G LA L+ L W R +W R +L AFF P E Sbjct: 601 HGIAPYAEVGGLEASIAGALAELVEALQRWWREARTAATPADWDARARALLAAFFRPATE 660 Query: 605 TEA-AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 E + + A Y +AVPL++LR+ +D+ + RFLAG V CT Sbjct: 661 DERLLLAALHDALAQWREACDEAGYAEAVPLAVLREAWLGTVDEPGLRSRFLAGGVTFCT 720 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ--KPKRGDRSRRDDDRYLFLEALI 721 LMPMR+IPF+ VCLLGMN+G YPR+ FDL++ + + GDR+RRDDDR L LEAL+ Sbjct: 721 LMPMRAIPFQGVCLLGMNEGDYPRRGVRSDFDLLAAPGQRRPGDRARRDDDRMLMLEALL 780 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 SA+ +L++S+IGRS++DN+ + PSVLV +L DY+ P +AL+ + Sbjct: 781 SARAQLHVSWIGRSVRDNTAQPPSVLVAQLRDYLAAGWGRPLVDALSVEHPLQPFSRRYF 840 Query: 782 CL--HTRMPFDPQNYQPGERQ------------SYAREWLPAA----------SQAGKAH 817 P D + G+ +YAREW A A Sbjct: 841 EQTVEQGEPVDGPADETGDETGNDTAALRRGLLTYAREWRAAHAREDAAAAASDPLTAAP 900 Query: 818 SEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR 877 + + + L L RF +PV RL V D + D EP L L Sbjct: 901 TPIDRRPAPADQPPLKLAMLTRFLRNPVADHLNERLGVRLALADEALADDEPLGLHALDE 960 Query: 878 YQINQQLLN-----------------------ALVEQDDAERLFRRFRAAGDLPYGAFGE 914 + ++L+ A Q + + G LP GE Sbjct: 961 SILLRRLVEQGDVQTAQLPASAPAADPESDADAARLQRALQDGSLSLQRQGILPLAGLGE 1020 Query: 915 IFWETQCQEMQQLADRVIACRQPGQSMEIDLAC---------NGVQITGWLPQVQPD--- 962 + + ++ + + ++ +QI WL +Q + Sbjct: 1021 RWQQAFVRQSLPMLAQWRIWQEAAPERAAPQPLNLALPLADGGALQIDDWLDGLQIEATT 1080 Query: 963 --------------------GLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRK 1002 + + + + + WL ++ + G + + + Sbjct: 1081 GALLWLDLQASRLCAKPGKKDQGKGKAGPVRPDKLYRAWL-VMLAAGAAGIALTGRIVGR 1139 Query: 1003 DGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDS 1062 D P AE A L+ L + APL + P S A L + Sbjct: 1140 DVTLELSPPPAEVARAALADLTGAWWASWRAPLAIAPRSALAALAEAPVLADADPSGPRP 1199 Query: 1063 TLQKARTKFLQAYEGNMMVR---GEGDDIWYQRLWRQLTPE--TMEAIVEQSQRFLLPLF 1117 A + Y+G R E D+ R++ + ++R PL Sbjct: 1200 WPLDAWIAAERTYDGGTFTRRVPPESDEPSLARVFADWEALGARADEFQHWAERLYRPLR 1259 Query: 1118 RF 1119 + Sbjct: 1260 AW 1261 >UniRef50_B5JHV1 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHV1_9BACT Length = 1133 Score = 480 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 263/1129 (23%), Positives = 458/1129 (40%), Gaps = 63/1129 (5%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L ++ SNR++ L A + I + L P E ++ + G+A+WLQ +++ G++ D Sbjct: 35 LYLHTSNRVENLAARLVEICQAVPLSRPLSQETVMTLNPGIARWLQFEIAKATGVSFGWD 94 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 FPLP + P F + WKL+ +L L ++ F +R Y ++ Sbjct: 95 FPLPGKLFARVLRGFEPGFDTNGVFPEDLARWKLVEILSTLEDQPRFAQVRAYCQT-AEG 153 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 +++ L+D+YLVYRPD + QWE WQA +W+ LV + + Sbjct: 154 SHRLAFANRLTRLYDEYLVYRPDIVTQWEDDPGSSNFD----WQAEIWRRLVRLVYPKNR 209 Query: 182 PRWHRANLYQRFIE-TLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 H A ++Q + P P R+ + G+S+L P+YL L L ++ +H+ Sbjct: 210 KPRHIARVWQDLSRGQILELGLQPQAWPERLLVFGVSSLAPLYLDLLDQLARYRPVHIFL 269 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 P YW D+K + K+ + D + GN LL Sbjct: 270 LQPSDMYWADLKTTKQIQKIAMK-------------AAGETGNRITSPEDWLYETGNALL 316 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVT-PDNLLHNIQSDILELENRAVAGVNIEEFS 359 S GK + ++ LL D Q+ AF + L +QSD+ +E+R +A Sbjct: 317 PSLGKQSQMFLDLLIDKNPQQDDTAFEPPFDESSQLACLQSDLFTIEDRDLA-------- 368 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 D ++ H C +REVE + D ++ L+E+P L +I+VM DI +Y Sbjct: 369 --KGGDAFSAYDGTLQVHSCSGRRREVETVWDLIVRRLDENPELKASEILVMAPDIQAYR 426 Query: 420 PFIQAVFG-SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 I+AVF +P++++D A V ++L R S +VL LL+ P+ Sbjct: 427 SHIEAVFRSKRGTHLEIPFSVADNSAGNRPGVFSGIFAILQSASGRASSAEVLELLECPL 486 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 L + +++ L + W+ E GI WG D D+ + E AT ++TW +R+ G A Sbjct: 487 LREVYSFSDQDLERIEFWIRELGITWGWDSDHRDQRESFATDRNTWSELRSRLSAGIAFS 546 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 S + L Y E G ++E G L L L R Q L W ML Sbjct: 547 SEVETPKGFLAYSEIEGELSETAGRLLECLDLLGSLRHNFRQTHSLAVWQDRLLAMLATL 606 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 + + + S L+++L+ +L+G Sbjct: 607 KSQRDDWQRDYVQASDMIHETLPALDDVFATG----SEAYRALSEKLESSASGGGYLSGG 662 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 V C+L PMR+IP VC++GMN +PR+ L FDLM+++ + GDR+ RD+DR FLE Sbjct: 663 VTFCSLKPMRAIPADTVCIMGMNRLDFPRRSNRLSFDLMAKESRIGDRNTRDEDRQFFLE 722 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 L+S + +I+Y G S ++ PS +++EL+ Y+ + L Sbjct: 723 TLLSVRSHFFITYQGTSSNSDTVNEPSAVLEELLSYLETAMPLEDF-------------K 769 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG-------KAHSEFVQPLPFTLPET 831 + R FDP +Q +Y + ++ KA S ++ Sbjct: 770 RILTQQKRQSFDPVYFQNDRNGTYDPDRAALRNRFNGLQTSEAKAVSTELEQTQGEEISE 829 Query: 832 VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ 891 + L+ L RF++ P +AF +V +E+ + +++ + GL R+QI + + Sbjct: 830 IELDALIRFFSDPAKAFASNVSKVKLVSEEDALEESDALLSGGLDRFQIRNEFAERIARG 889 Query: 892 DDAERL-FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGV 950 + E L + LP G + ++ + QLA+ + + + + G+ Sbjct: 890 EPLEELSIKALSQRKLLPAGLLETPTFASEYERAAQLAESI--GNVETSTHYVSVDLEGI 947 Query: 951 QITG-WLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN--GESRLFLRKDGEWR 1007 + G +++ + L + + W+ HL + + GE+ LF + Sbjct: 948 TLLGESTTRLEDGRQVLIHAGELKPKRVVDAWIRHLFAASLDPHFSGETYLFSLHEKGSP 1007 Query: 1008 FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYD-AQNDAMLDDDSTLQK 1066 E L+ L + + G +PL P + + L++ Sbjct: 1008 IRLGQVENPRKLLADLAQAFASGQRSPLPFFPVLSYNAFRAWNSCSSESEDERIGEALER 1067 Query: 1067 ARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLP 1115 AR + + R + + + EA V+ + F P Sbjct: 1068 ARKDLRASQVDSDYPRSYTWSAYDRICFGDQFEP-DEAFVKLAVAFWSP 1115 >UniRef50_A1SDB1 DNA helicase/exodeoxyribonuclease V, gamma subunit n=2 Tax=Actinomycetales RepID=A1SDB1_NOCSJ Length = 1113 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 301/1164 (25%), Positives = 499/1164 (42%), Gaps = 110/1164 (9%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG------ 55 L+++ ++R DVL + ++ L DPF E+++V + G+ +WL LS + G Sbjct: 3 LQIHRASRTDVLADALGDLLRT-PLADPFAEEVVVVPAKGVERWLTQRLSHRLGAGPRGD 61 Query: 56 --IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRH 113 + A + F P S + +L ++ ++ + + W L+ + + L +F L Sbjct: 62 DGVCAGVRFLNPRSLV-----SLLLGRERDDPWDPERLVWPLLATIDESLGEREFATLGR 116 Query: 114 YLTDDSDKR-------KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVE-----GLGEA 161 +L D + + ++ + A LF Y + RP + W G E GL Sbjct: 117 HLGHGVDGADGELRRNRRYSVALRLAHLFASYALQRPSLVTAWREGRDGEHGGEQGLPPD 176 Query: 162 QAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPP 221 AWQ LW+ L+ H + L++ P LP R+ + G + +P Sbjct: 177 LAWQPELWRRLIAQVDAPPPDVRH-----AQTCAALQAGGDGLP-LPDRLSLFGHTRIPV 230 Query: 222 VYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSE 281 + L+ALG+H ++HL P W D+ D Sbjct: 231 TEVALLKALGEHRDVHLFLPQPSPVLWDDLAD-----------------------LGGPG 267 Query: 282 NAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLL-----SDLESSQELDAFVDVTPDNLLH 336 D + VG+PLLAS G+ R+ LL ++ P LL Sbjct: 268 GVVPRAADDSVERVGHPLLASLGRDARELRRLLDGVSSEEVRPPAGTPTGSTTDPVTLLG 327 Query: 337 NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 +Q D+ N + R LDP D S+ H CH P R+V+VL + L+ + Sbjct: 328 WLQHDLR---------ANHAPSYDERSTRELDPDDHSLQVHACHGPARQVDVLREVLVGL 378 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA----PADRYLPYAISDRRARQSHPVLE 452 LE+DPTL PRD++VM DI++Y+P I A FG A L ++DR ++P+L Sbjct: 379 LEDDPTLEPRDVLVMCPDIETYAPLISAGFGLATTDGHPAHRLRVKLADRALTSTNPLLA 438 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 LL L R + DVL L + RF T++ L + +WV +G+RWG+D+++ Sbjct: 439 VAGDLLDLAGGRVTASDVLDLAGTDPVRRRFGFTDDELDRVSRWVARAGVRWGLDEESRA 498 Query: 513 ELELPATGQHTWRFGLTRMLLGYAME-SAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 + +TWR GL R+LLG AM LP D+ + +L G LA L+ ++ Sbjct: 499 AFRMERFPHNTWRTGLDRILLGVAMSGDDHHHLGRGLPLDDVASSEIDLAGRLAELVARV 558 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 + LA R + +W RD + + A+ + E++ + G Sbjct: 559 DRTLTVLAGARTVADWATGLRDGVRSLVDVAADDAWQVPQFERELGRAA--ASSHEGGLE 616 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 + L+ +R L RL F G + + T++PMRS+P +VVCL+G++DGV+PR A Sbjct: 617 LRLADVRAMLESRLAGRPTRANFRTGSLTVATMVPMRSVPHRVVCLVGLDDGVFPRAGAV 676 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 G D++ + P G+R R +DR L L+A+++A + L I+Y G Q + P+V + E+ Sbjct: 677 DGDDVLGRHPLTGERDVRSEDRQLLLDAVLAATEHLVITYSGADEQSGASLPPAVPLGEI 736 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 +D + A V+ + H P+D +N+ S+ L A Sbjct: 737 LDA-------------ADRTTNAPVRDRVLTRHPLQPYDARNFTRERPFSFDTAALAGAR 783 Query: 812 QAGKAHSEFVQPLP---------FTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 A E L V L+ L+ F HPVRAF + RL V E Sbjct: 784 SARGVRREPPPLLDGPLPPRLALDGRAADVSLQDLRDFLGHPVRAFLRGRLDVATPFEPD 843 Query: 863 EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQ 922 ++ D P L+ L ++QI +LL L+ D + + AG LP G + + Sbjct: 844 DLADAIPVSLDSLEKWQIGDRLLRQLLAGQDPVAVLTAEQLAGTLPPRGLGTLALHEVAE 903 Query: 923 EMQQLADRVIACR-QPGQSMEIDLAC-NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL 980 E Q+L R R +S+++D+ +G ++TG +P V ++ S L+ Q + Sbjct: 904 ECQRLWSRTADLRDGERRSVDVDVDLRDGRRLTGTVPGVYGSRVVSLGYSRLNARQRLHA 963 Query: 981 WLEHLVYCASGG-NGESRLFLRKDGEWRFPPLAAE---QALHYLSQLIEGYREGMSAPLL 1036 W++ L A+ + + KD L +A+ +L L++ G+ APL Sbjct: 964 WVDLLALSATYPDQHWTAHAVGKDRAGPKRALCGPLDHRAVGWLRDLVDLRDRGLCAPLP 1023 Query: 1037 VLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ 1096 V ++G AW + M D ++ AR ++ + GE D ++QR++ Sbjct: 1024 VPVKTGAAWADAHAR---ELMGQDHPPVEAARREWETDPHNQFGITGEDADPYHQRVYGP 1080 Query: 1097 LTP---ETMEAIVEQSQRFLLPLF 1117 P + E + PL Sbjct: 1081 AAPVEALLDAGLGEHAWAIWEPLL 1104 >UniRef50_A1KCB8 DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease n=3 Tax=Betaproteobacteria RepID=A1KCB8_AZOSB Length = 1139 Score = 478 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 325/1188 (27%), Positives = 509/1188 (42%), Gaps = 129/1188 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M + SNR + L+A++ + ER PF ++V S+ + + +++ +++ G+ AN+ Sbjct: 1 MFSIVFSNRYECLQAMLLERLAAERPG-PFGKRHVVVPSSALRRDVELAVAEHEGVCANV 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDF----TLLRHYLT 116 +F A ++W V+ E+P S F ++W++ LL D+ L HYL Sbjct: 60 EFSYLAQWLWTQIGHVV-EVPARSPFAPALLAWRVHALLDPAAPAGDWVAAHPRLAHYLA 118 Query: 117 DDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGH------LVEGLGEAQAWQAPLWK 170 +D R F+L+ + A +FD YL YR WL W G E +AWQA LW+ Sbjct: 119 G-ADARMRFELAERIARVFDHYLTYRAHWLESWARGERARLGEATEAERADEAWQAALWR 177 Query: 171 ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL 230 + + L + H A L+ R + ++ GLP V + G+ ALPP+YL L+ L Sbjct: 178 HIRD---GLALRQEHPAALFLRRVAGMDERALAAAGLPQTVHVFGLPALPPLYLAILREL 234 Query: 231 GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 + +++ L NPCR +W +I DP L+ L RQ Sbjct: 235 ARVVDVRLYALNPCREFWFEIVDPRRLSWLAARQADM----------------------- 271 Query: 291 GEQDVGNPLLASWGKL-GRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA 349 + GN LLA+WG+ L E F +LL + + IL++E Sbjct: 272 -FHETGNRLLAAWGQQTQAHIGLLFEGEREVVEEALFEPHPGRHLLARLHNAILDMEELE 330 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE----EDPTLTP 405 V + D SI HVCHS RE+EVLHDRLL +++ L P Sbjct: 331 PGSVALAAN------------DRSIELHVCHSRTRELEVLHDRLLDLMKAAAKRGEPLRP 378 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 +I+V+ D+D+ +P I+AVFG+APA R +P+ I+ Q +PV A LL+L R Sbjct: 379 DEIVVLTPDLDATAPLIEAVFGTAPAARRIPWRITGLGGTQENPVAAALDRLLALVAGRL 438 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE---LPATGQH 522 + V LL PV+AARF + E L + W+ +GIRWG+D ++ + A G H Sbjct: 439 PASAVFDLLQQPVVAARFGLGEGDLETIHDWMRAAGIRWGLDAEHAAAAGGVPVQACGGH 498 Query: 523 TWRFGLTRMLLGYAMESAQGE--WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 T GL R+ LG+A A + + + G A +G L + L R L + Sbjct: 499 TLDAGLDRLFLGWAAGDAATAAPFAGFIGAGAAEGNAALALGRLWRYVDTLRGLRADLQR 558 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA----VPLSL 636 + W L + E A+ + + A+ A D +PL++ Sbjct: 559 PQQAAGWRRALDSALTRLVGDEPEWAEALREVREAIVALTQAMAAAATDDGDAPAIPLAV 618 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + L +LD G V L +R +P++VVC++G++ G++P P FDL Sbjct: 619 VHPALIAQLDD-PARGGVPGGTVTFSALSSLRGLPYRVVCVVGLDQGLFPGSDRPAEFDL 677 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 M+ +P+RGDR RR DDR LFL+ L+SA++ L++S++GRS++D S PSVLV EL D + Sbjct: 678 MAARPERGDRQRRHDDRNLFLDVLLSAREVLHLSHVGRSVRDGSALPPSVLVDELFDVLA 737 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY-----QPGERQSYAREWLP--- 808 + + + A + LT H F + + + SY E+ Sbjct: 738 AACAADPGKP----DDLAAARRRLTVEHPLQAFSAEYFLPQGERDPRLVSYHEEYAAALA 793 Query: 809 -------------------------AASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAH 843 A A + P P V L L RF+ + Sbjct: 794 ARLGAPLRDADDDALVALAEEGDEVAVDGARVPFFDAPLPPPGPEWREVGLPQLIRFFRN 853 Query: 844 PVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ--DDAERLFRRF 901 P R + RL + ++E+ D EP + + L R + ++LL AL+ D E L Sbjct: 854 PSRYLLRDRLGLALPEGEAELEDVEPMVPDFLGRQALAERLLPALLGATVPDEEALLALA 913 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG------QSMEIDLACNGVQITGW 955 RA G+ P GA GE + ++ A V A ++ DL + Sbjct: 914 RAGGEYPAGALGEGALRRELAQLTVFAAGVRAELPARPLPPHVPTLAFDLDGEPWTLGAA 973 Query: 956 LPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGES--RLFLRKDGEWRFPPLAA 1013 ++P GLLR R + WL HLV CA+ + L +DG RF + Sbjct: 974 FGDLRPQGLLRQRYDDCRPVDYLAAWLAHLVLCAAPAPDVACETTLLARDGRCRFVAVPP 1033 Query: 1014 EQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQ 1073 A L+ + YR G+ PL P++ A+ + ++ KA ++ Sbjct: 1034 ATAHALLADCLRLYRAGLLRPLHFFPKAAWAYA------------VNGESMGKAYARWQG 1081 Query: 1074 AYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 GN E D Y+ R + + + R L PL Sbjct: 1082 ---GNRPAFAESADPAYRLALRGVADPLADDFAALASRVLGPLLDHLD 1126 >UniRef50_UPI0000E0F593 exodeoxyribonuclease V, gamma subunit n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0F593 Length = 1147 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 276/1177 (23%), Positives = 490/1177 (41%), Gaps = 107/1177 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVE---RERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIA 57 M V SN+ ++L ++ ++ ++ + FEP I+V+S GM +L M +++K G++ Sbjct: 1 MFHVVPSNKQEILTQVLISFIQDDYQQGIRGVFEPTTIVVESQGMQHYLNMEIAKKTGLS 60 Query: 58 ANIDFPLPASFIWDMFVRVLPE-IPKESAFNKQSMSWKLMTLL--PQLLEREDFTLLRHY 114 NIDFPL + I+ + +L + +P++S F ++ + W + T+L P + Y Sbjct: 61 MNIDFPLVSREIYSICRSILGDKVPQDSPFKREYLVWNIFTILQDPGFISDPRAAYANAY 120 Query: 115 LTDDSDKR-KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALV 173 + + + F+L+ + AD+++QYL+YR DWL WE G+L + WQ +W+ LV Sbjct: 121 WQEQPEPLLQCFRLAKQLADVYEQYLIYREDWLTAWEQGNLKGLNDTLEPWQQLIWEQLV 180 Query: 174 EYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKH 233 H A L I L T LP + I ++ L P ++ A+ ++ Sbjct: 181 A------IHPDHPAALRAAAISQLA---THQAKLPKSITIFAVNTLSPTQIEFFSAVAQY 231 Query: 234 IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ 293 I+++L F NPC YWGD+ L + E + + + Sbjct: 232 IDVYLFFLNPCSQYWGDVVSDKVLLR---------------------ERLSKGIDELKAE 270 Query: 294 DVGNPLLASWGKLGRDYIYLLSD--LESSQELDAF---VDVTPDNLLHNIQSDILELENR 348 D+ +P+LA+ G+ GR L D + F +LL +Q+DI Sbjct: 271 DISHPILANLGQQGRGLFNQLQDINYPDMTDSQLFIAPTADDAPSLLKQVQADIASAH-- 328 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 + + +D+SI H S REV+ LHD LL +L DP L P DI Sbjct: 329 -----------VTPVTLHPEDIDASIQIHSGFSAIREVQTLHDELLRILTADPDLQPHDI 377 Query: 409 IVMVADIDSYSPFIQAVFG-----SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 +VM ++ Y+PF+ ++F + L +I+DR S P + F+ +LSLPDS Sbjct: 378 LVMCPSVEEYAPFVNSIFRPSYKPAQTDSPQLVCSIADRAPLNSEPTVMMFLDMLSLPDS 437 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA--TGQ 521 RF ++ L +P + ++TE+ L W++ S I+WG++ + T Sbjct: 438 RFSVTKIIDYLRIPSVQKNLNLTEDELTLCINWLSMSQIKWGLNQAHKASWLDNEAVTEH 497 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 +TW +GL+R+ LG Q D GL + ++G L L+ +L+ +R L + Sbjct: 498 YTWEWGLSRLALGCLHSEMQEHHDEFAYVDAVEGLNSRILGKLLVLVNRLSTFRAQLNGD 557 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + ++EW + ++M + F + A +IEQ + A Y + L+L+R+ L Sbjct: 558 KSIQEWERLLQEMSQSLFGETSTQLRAQQMIEQTISQFSKQVQTAGYESPIGLALVRESL 617 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ-K 700 + + +FL G V +++PMRS+PFK++C+LG+NDG +PR P DL++Q + Sbjct: 618 SDKFSTPDALNQFLTGQVTFSSMVPMRSVPFKMICILGLNDGAFPRIALPNSIDLIAQSE 677 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 +RGDRSRR++DRYLFLEALISA+ LY+SY G+S +DN PS+++QEL+ Y+ Q Sbjct: 678 KQRGDRSRRNEDRYLFLEALISARDYLYLSYQGQSAKDNQTIEPSLVIQELLHYLDQKFI 737 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS---QAGKAH 817 L + +E + + PF P + E + Sbjct: 738 LADPQ----NEKPEKFSERIVRRAPLQPFSPTLFASNEHDFEQKGSFDQGWLALAKSGVL 793 Query: 818 SEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR 877 + + + + +P++ + V + + D EPF L+GLS+ Sbjct: 794 PAKTSTITVPDDIYLDHNDMTALFINPLKLHVNKQYDVVLDEYINVMDDVEPFSLDGLSK 853 Query: 878 YQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP 937 ++ Q LN D + P G++ + L D + Sbjct: 854 DKLLVQALNTASATIDYDNANDMGLDFVK-PLVNTGDVSQWMLKSQQMSLYDGLHRTIAE 912 Query: 938 ------------GQSMEIDLACNGVQITG--WLPQVQPDGLLRWRPSL------LSVAQG 977 Q ++ + + + L ++ Sbjct: 913 SLAQQPVTTARHNQVVKWQFEHFQFHVNALFAIDDEYHSHTFLHKVMTKSRLFELKLSLL 972 Query: 978 MQLWLEHLVYCASGGNGESRL------------FLRKDGEWRFP--PLAAEQALHYLSQL 1023 M L+ + + +G L + P + EQA L Sbjct: 973 MTHCLKLMCFGTTGDTSIRYLNSRERTTAGQKSVCLEVNTLHIPYDFMTPEQADIVLKLF 1032 Query: 1024 IEGYREGMSAP--LLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMV 1081 Y + + P + + ++ YD + ++ + + E Sbjct: 1033 SAQYIQALREPHFIHLDVYQNLESIRRQYDKDVVSNFKQIPHIEYLLDDYGEQREDKFSS 1092 Query: 1082 RGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 + + + L+ A+ + + P+ + Sbjct: 1093 YAWNVNTYCKWLFPHGFSHQDIALTNIDEWYFHPIIQ 1129 >UniRef50_B5EPU5 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EPU5_ACIF5 Length = 1130 Score = 467 bits (1201), Expect = e-129, Method: Composition-based stats. Identities = 340/1178 (28%), Positives = 518/1178 (43%), Gaps = 121/1178 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 V H +RL+ L + + L P E E+ LVQS G+A+WLQ TL+ GI A + Sbjct: 10 FIVLHGDRLEWLSDAVLEWLRAHPL-RPLEEEIFLVQSNGIAEWLQWTLAAHEGICAAVR 68 Query: 62 FPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 LP F+W+ + RVL + S +K ++W+LM LLP+LL DF LRH++ Sbjct: 69 VALPGRFLWESYARVLGTGIVSARSPLDKAPLTWRLMRLLPELLAHADFAPLRHFIGQSQ 128 Query: 120 DK----RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV--------EGLGEAQAWQAP 167 + +Q++++ ADLFDQY VYR DWLA W T + L Q WQ Sbjct: 129 RPDGALERRWQMAAQIADLFDQYQVYRGDWLADWTTDQSLLRRGDGERVTLPADQRWQPR 188 Query: 168 LWKALVEYTHQLGQP-RWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQA 226 LW+AL + H G RA ++++F+ L + LP RV I G + LP L A Sbjct: 189 LWQALRQDLHSRGLDQAPGRAQVHEQFLAALNAGRPPVTPLPRRVVIFGAATLPEQSLTA 248 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 L ALG+ +++ L NPCRY+W DI L + R++ + Sbjct: 249 LAALGRQMQVILAVPNPCRYHWADIVSGRELLRRERRRQPPRNG-----------HDLSA 297 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ---------ELDAFVDVTPDNLLHN 337 ++ GNPLLA+WG+ GRD++ LL + + +D F + D LL Sbjct: 298 TATEDLHQFGNPLLAAWGRQGRDFLDLLDQFDETAALQRQMDIPRIDLFSEDQGDTLLRQ 357 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 +Q I +LE LD D S+ FH+ HS REV++LHD+LL Sbjct: 358 LQVQIRDLEGIRPETC-----------TALDDNDHSVVFHIAHSALREVQILHDQLLDRF 406 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA--DRYLPYAISDRRARQSHPVLEAFI 455 L PRD+IVMV +I ++P I+A F RY+PY I D +AR P+L A Sbjct: 407 ATGK-LQPRDVIVMVPEIGGFAPLIRATFDQYDREDRRYIPYHIVDLQARDEQPLLLALD 465 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 LL LP+ R ++ LL+ P L RF + E L ++ W+ +G RWG+ ++ L Sbjct: 466 WLLRLPEQRCRQSEIRDLLNCPALRRRFGLELEDLPIVQHWLAGAGWRWGLSAEHRAALG 525 Query: 516 LPAT-GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 +P Q++ F L R+ LGYA + + Y E GL A L+G L LL +L W Sbjct: 526 MPHCGSQNSGDFALQRLCLGYASGD-DSHFSGIEAYGEVGGLDAALLGPLGQLLEKLAHW 584 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA-MTLIEQQWQAIIAEGLGAQYGDAVP 633 + L + E W R++L FF + + A + +E+ + + A + +A+P Sbjct: 585 QHVLGESLVPEHWGEAARNLLTDFFSASDDDDEALLQNLEEALRQWQTDCAAADFNEALP 644 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L++ R + LD + + FL G V CTL+PMR++P+ +VCLLGMN+G YPR+ Sbjct: 645 LAVFRGAWLEMLDAPDLGRSFLGGGVTFCTLLPMRAVPYPLVCLLGMNEGDYPRRSPRPD 704 Query: 694 FDLMSQ--KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 FDLM+ + GDRSRRDDDRYL LEAL++A+++LY+S+ GR ++N ER PS+LV +L Sbjct: 705 FDLMALPGMARPGDRSRRDDDRYLMLEALLAARRELYVSWAGRDQRNNHERAPSLLVAQL 764 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ-PGERQSYAREWLPAA 810 + I T H PF P +++AREW P+ Sbjct: 765 REAIRDGW--------------PPALEKRTFEHPLQPFSPDYLAGKPGLRTWAREWYPSP 810 Query: 811 SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 A + + L F+ P RAF++ RL+ +F ED D EPF Sbjct: 811 HSAPENAALPDPAEITPRSIR----ELLEFFRLPARAFYRQRLRTDFNEEDPAEEDDEPF 866 Query: 871 ILEGLSRYQINQQLLNALVEQDD--AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLA 928 L+ L Y + + LL A + R R +G P ++ + Sbjct: 867 TLDSLETYHLLEDLLRAAEKNGPDRIAERVRAQRRSGRYPLAGMASRTATALLDDVTPVL 926 Query: 929 DRVI----ACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSV---------- 974 Q + A + + WLP + + L Sbjct: 927 TVWREIGTEWTAAPQRRVVHRARGRILLEDWLPALYQNNAGDLAFVQLRASRLLNKDSKK 986 Query: 975 --AQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMS 1032 + + + G + + +D R P + L L++ ++EG+ Sbjct: 987 PEGDKLAALWLQQLLANAVGLRCGGIVVGRDVLVRAAPPPPGA-IAALDDLLDLWQEGLC 1045 Query: 1033 APLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGE-GDDIWYQ 1091 PL V ++ L+ A Y+GN + GE D+ Sbjct: 1046 EPLPVTLKTALVSLQGKNPA--------------------PIYDGNDRLPGEARKDLSLF 1085 Query: 1092 RLWRQLTPETMEA-------IVEQSQRFLLPLFRFNQS 1122 R + + E + P + ++ Sbjct: 1086 RDYPDFATLSSARTGPQRRGFAEYAAALYRPFAGWLET 1123 >UniRef50_C0ZQ87 Exodeoxyribonuclease V gamma chain n=6 Tax=Corynebacterineae RepID=C0ZQ87_RHOE4 Length = 1093 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 274/1167 (23%), Positives = 460/1167 (39%), Gaps = 120/1167 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG----- 55 ML++Y + R D L + + ++ L DPF E + V + G+ +WL LS + G Sbjct: 1 MLKLYRAERSDTLVSALATLLRT-PLSDPFARETVAVPAKGVERWLNQRLSSQLGTSGPS 59 Query: 56 ----IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLL 111 I+ANI FP PA + + V + ++ + W ++ ++ + L +L Sbjct: 60 AVDGISANIAFPSPARLVAESVAAVSGITADDDPWSPTRLVWTVLDVIDESLGEPWCGVL 119 Query: 112 RHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVE----GLGEAQAWQAP 167 +L + + F ++ +LF Y RP L W G L + L E WQA Sbjct: 120 AKHLEGHR-EGRRFASATHVTELFRSYAAQRPQMLIDWAAGRLTDGHGLALSEDFEWQAR 178 Query: 168 LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQAL 227 LW + + G A + L LP R+ + G + LP L Sbjct: 179 LWCIVADKIDVPG-----PAERLGQVSRALVE-DPALVDLPERLSVFGPTRLPVDQRMIL 232 Query: 228 QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF 287 AL + ++H+ +P W + SE+ + Sbjct: 233 SALSANRDVHIWLPHPSPALWTKMSSRI---------------------PPRSESTIRRS 271 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN 347 NPLL+S + R+ L + + P +LL +++D+ + + Sbjct: 272 EDGSALISANPLLSSLARDVRELQISLGA-AEFESVHLPEPAGPKSLLATVKADV--IAD 328 Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 RA + D ++ H CH P R+VEVL + LL + E+DPTL PRD Sbjct: 329 RAPSVAA--------------EPDGTVQVHACHGPARQVEVLRECLLRLFEDDPTLQPRD 374 Query: 408 IIVMVADIDSYSPFIQAVFGSA---PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 ++VM D+++Y+P ++A FG L ++DR RQ++PVL SLL L D R Sbjct: 375 VLVMCPDVETYAPLVRAAFGQGVHGHPGHLLRVRLADRGLRQTNPVLAVLGSLLELADGR 434 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + +VL L + RF E+ L LR+W E+G RWGI L A Q+T+ Sbjct: 435 ATASEVLDLAAADPVRTRFSWGEDELERLREWTTEAGARWGIGSRQRATFGLDAFPQNTF 494 Query: 525 RFGLTRMLLGYAMESAQGEWQSV-LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + R+LLG + + ++ W + LP D+ G +L G A + +L + R LA Sbjct: 495 NTAMDRILLGVSADESENAWLDLALPLDDVDGTDIDLTGRFAEFVDRLAVSLRDLAGPHS 554 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 EWL V L+ ++ A + + L+ +R L++ Sbjct: 555 PAEWLRVLMRALDLLTDTAPADSWQSAGAHRELVA----AVEFGGETMLRLADVRAMLSR 610 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 L F G + +CT++PMRS+P +VV L+G++D V+PR G D++S+ P Sbjct: 611 SLAGRPTRANFRTGELTVCTMVPMRSVPHRVVVLIGLDDEVFPRTGGVDGDDILSRHPVV 670 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 G+R R +DR L L+A++SA + L + Y G R P++ + L+D + + Sbjct: 671 GERDLRSEDRQLLLDAVMSAGEHLILLYTGADPVTGVVRPPAIPLSGLLDVLSATV---- 726 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 + H FD +N+ P + S+ L A A E Sbjct: 727 ---------GPEAINGVLTRHPLQSFDNRNFSPDQPFSFDTAALAGARAAAGTPIELPTV 777 Query: 824 LPFTL----PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 L L P+ V L L F HP R F + RL V D +I D+ L+ LS + Sbjct: 778 LSAELLEVHPKEVNLADLVNFLVHPARGFLRQRLGVRVPELDDDIADSLATELDPLSTWA 837 Query: 880 INQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ 939 + ++L + + + G LP G + QLA + + Sbjct: 838 LGDRMLLSRLAGRSSADFRAAEWRRGTLPPYNLGASVLGNVEWVVDQLAGLALPHLEGDS 897 Query: 940 S-MEIDLACN-GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESR 997 +++D+ G ++TG + V + ++R S L+ M W+ L A G G Sbjct: 898 EAVDVDIDLGDGHRLTGTVTGVHGNSVVRASYSSLAPKHRMTAWINLLALKAHGRPGALD 957 Query: 998 LFLRKDGEWRFPPL-----AAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDA 1052 G + A A L QL++ G+ PL + + + + + Sbjct: 958 AVSIGRGRGKIAAARSVLDAPGNAAEILQQLVDLRERGLQRPLPMWAATSAEYARRRFGG 1017 Query: 1053 QNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ--------LTPETMEA 1104 + ++ A + G GE D ++ + P + + Sbjct: 1018 E---------SVDDATNGADTQWTGQY---GEMIDPSNAYVFGEARTLAELAADPPSDDE 1065 Query: 1105 ---------IVEQSQRFLLPLFRFNQS 1122 ++R PL ++ Sbjct: 1066 FVWAEEPTRFGVLARRLWDPLLTNERA 1092 >UniRef50_B4RTM0 Exodeoxyribonuclease V, gamma subunit n=3 Tax=Alteromonas macleodii RepID=B4RTM0_ALTMD Length = 1206 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 286/1091 (26%), Positives = 482/1091 (44%), Gaps = 85/1091 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +Y SN+L+ L L+ ++ ++ L D F PE ILV+S GM W+ M ++ K G+A NI Sbjct: 1 MLALYPSNKLEHLSFLLTTLLRQQPL-DVFTPETILVESPGMQHWVSMQMANKQGVAMNI 59 Query: 61 DFPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQ--LLEREDFTLLRHYLT 116 DFPLP F+W+ VL ++PK+S + ++ ++W++ +L L++ + F + Y Sbjct: 60 DFPLPVRFMWNTARTVLGADKVPKQSPYRREVLTWRIDNVLQDNALMDSDAFEQVNKYWQ 119 Query: 117 ----DDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKAL 172 + + QL++ AD+++QYL+YRPDWL +WE + + WQ+ +W+ L Sbjct: 120 SAGSEQEQGLQRLQLATALADVYEQYLLYRPDWLFKWENNE-RAVFDDMEVWQSEIWRIL 178 Query: 173 VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGK 232 + H A L+Q +E LE+ P LP RV + I+ + P + AL + Sbjct: 179 AKDQ------PLHPARLHQMMLEALEAGNV-PAHLPKRVIVFAINTMAPQLIAFFDALAQ 231 Query: 233 HIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE 292 HI+IH+ NP YWG+ K + AKL R E Sbjct: 232 HIDIHIFHLNPSVNYWGEAKSSSEQAKL-LRLEGLKKWMEEDQS---------------- 274 Query: 293 QDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA--V 350 NPLL + GK GR+ LL++L++ + + + Sbjct: 275 ----NPLLGNLGKQGRELFNLLTELDTFEISAFDSPDFESAGEGEDEHGQCHSRGLLDYI 330 Query: 351 AGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV 410 ++ D S+T HS REV+VLHD LL L +D T TP DI+V Sbjct: 331 HNDILQAAHPQPLIHQSKNKDDSVTVMCTHSALREVQVLHDHLLHWLSQDKTRTPSDILV 390 Query: 411 MVADIDSYSPFIQAVFGSAPADR-------YLPYAISDRRARQSHPVLEAFISLLSLPDS 463 M I++Y+PF+ AVF LP I+DR + P++ AF++LL LPDS Sbjct: 391 MCPAIENYAPFVDAVFHRVGTKSLGATGQVRLPCTIADRSPMDAEPLIAAFMALLQLPDS 450 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL--ELPATGQ 521 RF D+L L + + RF ++++ + + W+ ++ I WG++ + + + Sbjct: 451 RFGVSDILDYLQLDSVQKRFSVSQDDIEQMVVWLKQAHIHWGLNSAHKTAVSEGVNLDDT 510 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 ++W +G+ R+L+G ++ VL + G A +G L ++ L + + L Q Sbjct: 511 YSWWWGIRRLLMGMLAPDSEMIVSDVLTIPDVEGQSALTLGKLIEVVALLGEFAQELTQP 570 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 R E+W + +A F+P + + + LI + + A A Y + L +RD L Sbjct: 571 RTPEQWSKALIALRDACFMPTKDQQQSWDLIAKVAADLAARCEEANYEHELTLRQVRDLL 630 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS-QK 700 R F+ G V +C+++PMRSIPFK VC+LG+ND +PR+ +PLG DLM+ Sbjct: 631 LNRFSSPDAGNHFMTGQVTVCSMLPMRSIPFKKVCILGLNDSEFPRKSSPLGLDLMASDG 690 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 + GDRSRR +DRYLFLEA+IS ++ LY+SY G + +NSER PS+++ E +D + ++ Sbjct: 691 RRVGDRSRRLEDRYLFLEAIISTRESLYLSYQGNDVTNNSERQPSLVLAEFMDMLENNYA 750 Query: 761 LPGDE----ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 L ++ A SE L T Q + + A + A + Sbjct: 751 LSLEKYAVHAPLHPFSEPVFAGALPSYETGWLRLADALQHNKFGANAADTNENADVVDTS 810 Query: 817 HS------EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 T + + R + P+ F RL VN + + ++EPF Sbjct: 811 LDTATADISQSPRALATQALRLSNMQIARAFKDPLEHFSIQRLGVNLSQSFTLLENSEPF 870 Query: 871 ILEGLSRYQINQQLLNALVEQDD----------AERLFRRFRAAGDLPYGAFGEIFWETQ 920 L RYQ+ + ++ + +E++ GD+P E Sbjct: 871 ETNALLRYQVLDAIFSSPERNNSSELDASELTYSEQVITFASLRGDIPNNPVAMDEVEMW 930 Query: 921 CQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL 980 + L+ + + + D L+ + + + Sbjct: 931 KEGALALSQAMGPHDAEPKKAQFQ---GKYITFTTSALEGSDALVELCAGKVDAHRALGF 987 Query: 981 WLEHLVYCASGGNGESRLFLRKD------------GEWRFPPLAAEQALHYLSQLIEGYR 1028 ++ L++ +S + + + +F + E A+ L + + Y Sbjct: 988 FISQLIFSSSDETTSYTHYPLEIYACSWEKGETILKKQKFAAVERETAVQLLLFIEQLYM 1047 Query: 1029 EGMSAPLLVLP 1039 +AP V Sbjct: 1048 AIYTAPTPVHL 1058 >UniRef50_D1N1Q2 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N1Q2_9BACT Length = 1095 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 312/1148 (27%), Positives = 493/1148 (42%), Gaps = 97/1148 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 +Y SN+L+ L A+ ++ DPF PE ++VQ+ GMA WL+ +++ I AN D Sbjct: 3 FNLYSSNKLEDLAAIFRRMIFDRPGPDPFVPETVVVQTQGMATWLEQEMARDGSIMANFD 62 Query: 62 FPLPASFIWDMFVRVLPEIPKES------AFNKQSMSWKLMTLLPQLLEREDFTLLRHYL 115 P SFI ++LP E+ F+ + +W++ LL + + L YL Sbjct: 63 MPFLQSFILKTMRQLLPREELEAFNRECRIFSPEVAAWRIFRLLGE--SAGRWPELDRYL 120 Query: 116 TDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEY 175 T RK QL+ + ADLFDQY VYR D L W G WQ L++ + + Sbjct: 121 TGSEPVRKRRQLAGRIADLFDQYQVYRGDLLEAWRRGEEPGRYV----WQQQLYREIAKG 176 Query: 176 THQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIE 235 +++F E + +P R+ + G+ +PP+YL L+ L E Sbjct: 177 FTGPY-------GWFRKFFERVPERDLWS-RVPVRISVFGVGTMPPLYLNFLRHLSAITE 228 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 ++L + NPCR +W D + + +L + DV Sbjct: 229 VNLFYLNPCREFW-DTYEKRFRDRLADKNSGVF----------------------ENTDV 265 Query: 296 GNPLLASWGKLGRDYIYL---LSDLESSQELDAFVDVTPD----------NLLHNIQSDI 342 NPLL S G GR + L +L + + F P+ +L IQ DI Sbjct: 266 ENPLLTSLGAQGRSFFAQTLELPELARVRSAELFRSFVPEKSESLAYPGATMLQTIQEDI 325 Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 L + R G ++E D SI H CH+ +RE+EVL D L+ + +E Sbjct: 326 LRMRRRGPDGDDVEVGRTRKIDYR---RDRSIRVHSCHTIRRELEVLKDELIRLFDESNG 382 Query: 403 -LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 + PRD+IVM DI++Y P+I+AVF + Y ISDR RQ + E F+ LL Sbjct: 383 AVQPRDVIVMAPDINAYEPYIRAVFNDETFEG--RYGISDRSLRQESLIAETFLQLLRQA 440 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 RF + ++L+LLD P L +F I + + LR+ V +S IRWG D R G+ Sbjct: 441 SGRFEASEILSLLDTPALRQKFRIADAEMETLRELVGQSAIRWGYDAAARRRFCDFEFGE 500 Query: 522 HTWRFGLTRMLLGYAM--ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 +WR G R+LLG+AM Q LP + G AEL+G S + L Sbjct: 501 FSWRCGFDRLLLGFAMTAPEDQLVNGEYLPCGNAEGSDAELLGRFVSFVSSLAELGERTG 560 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 E W + + ++ FF PD E+ +T + A A + +PL + D Sbjct: 561 NAHSAEAWAQLFHNAVDTFFRPDKESLPEITALRGTIDAFAAAARDGNCDEPLPLEAVTD 620 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 +L+ + + FL G + C+++P+RSIP + V LLG+N+G +PR+ LGF++MS Sbjct: 621 QLSDSFSLVQNNMPFLRGGITFCSMVPLRSIPMQAVALLGLNEGEFPRRDIRLGFNIMSD 680 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 + + GDRSR+ +DRYLFLEAL++A++ L + Y G ER P+V + +LID + S Sbjct: 681 R-RLGDRSRQMEDRYLFLEALLAARRTLMLFYHGSDPLTLEERPPAVPLADLIDVLKASF 739 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 + + + + Y P ++ A A Sbjct: 740 RDFEVIRHSLQSF------NFRYFDPANGAELRCYSPEYFRAARSLHGYLAGGAEPESRL 793 Query: 820 FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 P LP + L L+R + + F + R+ ++FRT+ D EPF L+GL YQ Sbjct: 794 PFTLRPEPLPPVLELAELERAFLNHPEYFLRNRVGLSFRTDRCTPEDKEPFTLDGLGSYQ 853 Query: 880 INQQLLNALV---EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ 936 + +LL+ + E E +R A G LP G+ G +ET +++ L A Sbjct: 854 VRDRLLDWRLSSDEGPSGELAYRLMLAGGQLPLGSAGRNEFETARRQVAALTPEQYALLT 913 Query: 937 PGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL----VYCASGG 992 + + NG+ +TG + + S + + V A Sbjct: 914 ERHAEPFAVETNGITVTGSMFLSPDGTTQLFVHGSGSSPKHLLRLRLRHLLLTVRNAGNI 973 Query: 993 NGESRLFLRKD--GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCY 1050 S F KD P + A L +L+E +R+G+S PL + A+ + Sbjct: 974 PARSLGFFIKDSVEVVELPEFEPDVAEAELGRLLELFRDGLSRPLPLA-----AYFSSAC 1028 Query: 1051 DAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQ-- 1108 A+++ + R L ++ + + R +R EA +E Sbjct: 1029 SAKDEP--------EAKRRAALAKFDPGPFDFPLDNLEGFHRCFR-PEDFNDEAFLELVF 1079 Query: 1109 -SQRFLLP 1115 + P Sbjct: 1080 RCADLIYP 1087 >UniRef50_A4B914 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Reinekea blandensis MED297 RepID=A4B914_9GAMM Length = 1080 Score = 463 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 318/1124 (28%), Positives = 512/1124 (45%), Gaps = 97/1124 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK--FGIAA 58 ML Y SNRL+ L L+ + +P + +LVQ GM WL M L+++ + Sbjct: 1 MLYTYPSNRLENLV-LVLDTLMNNIGSEPLTADAVLVQHPGMQHWLSMELAKQSSNQLCM 59 Query: 59 NIDFPLPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQ--LLEREDFTLLRHY 114 NI +PLP + WD+ +L +P+ S + ++ ++W+L LL Q + Y Sbjct: 60 NITYPLPVRYFWDLIRLILGPDRVPERSVYTREILAWRLYHLLQQDAITANPLMLEPNRY 119 Query: 115 LTDDS---DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKA 171 + + FQL+ + ADL++QYL+YRPDW+ W+ A+ WQA LWKA Sbjct: 120 WQEQPAYLQDSRRFQLAEQLADLYEQYLMYRPDWIEHWQE-------SPAEHWQALLWKA 172 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 LV+ H L + L LPS F+ GI++L P++L L L Sbjct: 173 LVDE------DPQHPLALMREASRRLSH---PAQPLPSHFFVFGINSLAPIWLDFLSHLA 223 Query: 232 KHIE--IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 + + IH+L+ NP +W + K RQ++ + + Sbjct: 224 RSTDTDIHILYLNPSAEHWDQLHTEKQALKTRLRQQQSAQQRASWIDDDALFTDEAD--- 280 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA 349 NPLL S G+ G+ ++ LSD + AF + L +Q D+L L + Sbjct: 281 -------NPLLTSLGQQGQVFVRQLSDKAD-YDAQAFSAPEAETQLQTLQRDLLTLHDAR 332 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 ++ D ++ HS REV+ LHD LL DPTLTP+D++ Sbjct: 333 SQPHTLDH-------------DGTLMISSAHSAFREVQGLHDWLLHRFNADPTLTPKDVL 379 Query: 410 VMVADIDSYSPFIQAVFGSAPADRY-----LPYAISDRRARQSHPVLEAFISLLSLPDSR 464 VM +++ Y+PF+QAVF + A+ LP +I+DR + + P + AF+ LLSLPD+R Sbjct: 380 VMCPNVEDYAPFVQAVFSRSFAELSEAVPPLPCSIADRNLKDADPTVAAFLELLSLPDTR 439 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL-ELPATGQHT 523 F +++ L +P +A +F+++ + L+ + +W+ + I WG+D + + T T Sbjct: 440 FEVSRLISWLRIPAIADKFNLSADDLQRITRWLERANIHWGLDGQHKAQWTGQECTDHFT 499 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 W+ GL R+LLG+A L + G A ++G L S++ QL R L + R Sbjct: 500 WKQGLDRLLLGFAYGDHDAFVHDELLLHDVEGADALILGRLTSIIEQLQNIRSDLTRART 559 Query: 584 LEEWLPVCRDMLN-AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL- 641 W D L A + E + I + A + + Sbjct: 560 PSAWQSYLIDQLQIAMLSTQSAYERSNQSILKAINDFTEFANKANLEQTDLPLSVVRYVL 619 Query: 642 -AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 E+ +F+ G + +C+++PMRSIPF+VV +LG+NDG +PR PLGFDLM+Q+ Sbjct: 620 ENAFASPEQTGSQFMTGQITVCSMVPMRSIPFRVVAILGLNDGDFPRNRPPLGFDLMAQQ 679 Query: 701 P-KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 P + GDRSRR DDRYLFLEAL+SA+ LY+SY G I+ N R PS++++EL Y+ + + Sbjct: 680 PPRLGDRSRRGDDRYLFLEALLSARDHLYLSYQGFDIRKNEARPPSLVLEELFSYLERGY 739 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 +A PF P+NYQ GE S+ +W+ + Sbjct: 740 GFE--------------RARHIRQLPLQPFSPKNYQ-GEYPSFNDQWIHLQRPEPEQELL 784 Query: 820 FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE-IPDTEPFILEGLSRY 878 + P P + +F++HP RAF + RL + +E + D+EPF L L RY Sbjct: 785 NLLPATDLSPSE-SIHDWVKFFSHPARAFCEQRLGLYLNNTTTENLEDSEPFTLNHLDRY 843 Query: 879 QINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG 938 Q+ + ++AL+ Q+ + L ++ +AA P ET Q+ D V A Sbjct: 844 QLQTETVSALLNQESPDVLIQQAKAASAFPLSDLALTTAETWQQQAASFTDLVRAEGADR 903 Query: 939 QSM-EIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESR 997 + L ++G LP + LL WR + +QLWL HL+ + Sbjct: 904 IEYRPVTLQTADWSLSGVLPIIDNQQLLSWRLANAKGRDILQLWLMHLLANSQKPTHSRG 963 Query: 998 LFLRKDGEWR-FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDA 1056 L+ +D + F E A L+ L +++G+ P ++ + +L + + Sbjct: 964 LYRGRDEKVEQFDLAPIEDATSLLNDLYRQWQQGLQEPSVLHSDWLPLYLSDPTNEK--- 1020 Query: 1057 MLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPE 1100 KF Q ++ N RG D + ++Q+ Sbjct: 1021 -------------KFWQIWDDNFNHRGLRYDPYIDFCFQQMPDP 1051 >UniRef50_B0TXZ0 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Francisella philomiragia RepID=B0TXZ0_FRAP2 Length = 1100 Score = 461 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 274/1129 (24%), Positives = 502/1129 (44%), Gaps = 76/1129 (6%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L Y SN+L+ L ++ +++ E+ D F P ++V S GM WL M L+Q IA N+ Sbjct: 3 LYTYPSNKLEYLVQVLSKLLDVEKK-DFFTPTQLIVGSRGMQHWLSMQLAQYRNIAMNLK 61 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 + + +I D+ + + + A+ K ++W++ L + + L+ Y + Sbjct: 62 YDMINGYILDICYELTAKQEYKKAYTKDILAWRIFRSLDSI----NNPKLQEYY--HNSD 115 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEG--LGEAQAWQAPLWKALVEYTHQL 179 K +QLS K A +F Y++YR +WL +WE G + + WQ LW+ALV+ Sbjct: 116 LKKYQLSVKIAQVFTMYIMYRAEWLQKWEQGEYINPAKPENDEDWQMQLWQALVKEVQDT 175 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 + ++ L +P ++I G++ + P L + L K+I++++L Sbjct: 176 PYK------VQAEALQKLNQQNLEKLNIPKDIYIFGVNTISPKNLSFVFELAKYIDVNIL 229 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 + NPC YW D+ A L + PL Sbjct: 230 YINPCSEYWYDLHKSKISAWLDSNDYEL-----------------------------QPL 260 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 LA+ G+ G+++ L + + QEL+ F ++L +D N+ Sbjct: 261 LANLGQQGKEFFNQLLENQEKQELEVFEKFDKNSLDFEKLAD----NNQTQLVSLQRNLL 316 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 D + D SI+ + CHSP REV++LHD+LL M++ DP++ PRDI+VM +I+ YS Sbjct: 317 ELDCQNHAKQKDLSISINSCHSPLREVQILHDKLLDMIKADPSIKPRDILVMCPNIEDYS 376 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 P+I +VF D+ LP +I+DR S P+ +FI LL LP+S F +L L VP + Sbjct: 377 PYIDSVFSRFSTDKKLPCSIADRTLLDSEPLAASFIELLQLPESNFEVNKILDYLSVPAI 436 Query: 480 AARFDITEEGLRYLRQWVNESG-----------IRWGIDDDNVRELELPATGQHTWRFGL 528 +F IT+E L +R W+ ES WG+ + + Sbjct: 437 QQKFKITDEQLETIRYWLKESCIHHSNNGQTFSWSWGLKRLMFGFSYSDSNHIVDLKLPR 496 Query: 529 TRMLLGYAMESAQGE----WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 + + ++ G +G L LL L + + L + R L Sbjct: 497 QSATATPSYQRGISINYQELDQLMTIPVIEGSEIAELGGLYELLELLEKYSQELLKPRSL 556 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 E W +M + F + + I+ + + + L +R L + Sbjct: 557 EAWQDYLLEMFDDVFNVTNDEQYIAKKIKDIIVKTVTTAKDVLLTEEIDLYTIRYCLISQ 616 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK-R 703 L + I+ FL G V C++ PMR++PF+V+ +LG+N+G +PRQ + + FDLM++ + + Sbjct: 617 LSEPIINNHFLNGKVTFCSMTPMRNVPFRVIAMLGLNNGKFPRQESAISFDLMARLGRVK 676 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH-YLP 762 GDR++RDDDRYLFLE + SA+ LY+SYIGRS++ N E+ PS++++ELI Y+ +++ + Sbjct: 677 GDRTKRDDDRYLFLETITSARDYLYLSYIGRSVKTNVEQQPSLILKELISYLQKNYSWHT 736 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP--GERQSYAREWLPAASQAGKA-HSE 819 D + ++ + ++ P P + + E +SY WL K + Sbjct: 737 LDNVIKDNKLPKSERKNIISDIKEYPLHPFSSKCYADEYRSYDEAWLKLLQSEPKVFYDS 796 Query: 820 FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 + LP+++ + L + + P++A+ L++ + E+ D+EPF + L +++ Sbjct: 797 KLLSNSVNLPKSLSISKLVKIFEDPIKAYTNYGLELYLEDDFEELEDSEPFDINSLDKHK 856 Query: 880 INQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ 939 Q LLN L D E + + +G LP E + + +Q+L D+ + Sbjct: 857 FKQDLLNTLENNKDKELTIKTAKLSGKLPESVLTENEINKEVESIQKLLDKANLANYESK 916 Query: 940 SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLF 999 ++ ++ ++ + +L + S + +L+L L+ S S + Sbjct: 917 YFHQEILGYELEANC---HIKDNQVLLYTSSTFGIKHRFELYLTALLVALSEQQDISATY 973 Query: 1000 LRKDGEWRFP-----PLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQN 1054 + D + ++ A L + + + +S P LV + A ++ + Q Sbjct: 974 VYFDKDKNQADTNTFAISHLGAKQLLEKYLSNAEKIVSKPSLVHLDLAKAIMEYVKENQK 1033 Query: 1055 DAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETME 1103 + T ++ + + + + ++ Y +L+ P+ + Sbjct: 1034 KDASLVEKTTKQKQQAWENVIKSSETNYKALENNSYFKLFYSEHPKIED 1082 >UniRef50_A6DNF3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DNF3_9BACT Length = 1099 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 280/1131 (24%), Positives = 517/1131 (45%), Gaps = 76/1131 (6%) Query: 2 LRVYHSNRLDVLEALMEFIVERER--LDDPFEPE--MILVQSTGMAQWLQMTLSQKFGIA 57 +R+ SN+L+VL + + ++ E+ ++ ++++QS GMA+W+ M ++ GIA Sbjct: 1 MRISASNQLEVLVSQLADSLQNEKCRPEELLGRPNDLVIIQSRGMAKWIDMQIADHNGIA 60 Query: 58 ANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD 117 I++P +FI + V+ PKE ++++S++W++ LLP++ FT++ Y+ Sbjct: 61 TRIEYPFIRTFISSILVKC-SYSPKEDIWDRESLAWRIFKLLPEI--ESKFTIIHDYVK- 116 Query: 118 DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGE-------AQAWQAPLWK 170 +++ + FQL+ + A L D+Y+VYR DWL W G + +AWQ LW+ Sbjct: 117 -TNQLRRFQLAEQLASLIDEYMVYRHDWLQSWIQGKAFTQFNQGLEKELKHEAWQIALWQ 175 Query: 171 ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL 230 L E Q L LP R+ I GI+ +PPV++ + L Sbjct: 176 KLCESAQNSFQAALQNFLLADDI-------QPEVLELPPRIAIFGITNMPPVFVNFFEKL 228 Query: 231 GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 + ++ L NPC+ YWGDI+ + A + + + L +S Sbjct: 229 SQLTQVTLYHFNPCQEYWGDIRMERFSAF-PLQGKDDLGLRGPIFSRTFENEIPDLPHSL 287 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV 350 + LGRD++ LL + S L+ + LLH IQ+ ILE++ Sbjct: 288 LKSLG---------LLGRDFLNLLIENTSFDTLEHYAPSESSQLLHRIQNGILEMQEDFE 338 Query: 351 AGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV 410 + D S+ CHSP+RE+E LHD L+ L ++P L P+DIIV Sbjct: 339 DDLV---------------TDDSVKISSCHSPRRELEALHDYLVGSLADNPDLRPQDIIV 383 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 M +I Y+P I+ +F + + L ++I+D+ + P++ +++ + L SR S D+ Sbjct: 384 MAPNIHDYAPHIRNIFSNP-DNMPLDFSITDQE-LRGRPLVNSYLKIFELAKSRLSSNDL 441 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 L + + P +R+ + + + +R W+ ++ IRWG D + ELP Q++W+FG R Sbjct: 442 LEIFENPDFLSRYKLKVDDVHTIRDWIEQARIRWGKDAQQRADWELPEFEQNSWKFGFDR 501 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL-AQERPLEEWLP 589 +L GYA + + + S+L G ++G + + QL + +E+ L+ W Sbjct: 502 LLAGYAFDDPE-LYDSILSCP--IGGDGAILGKIKTAADQLFSIYEIITQEEKSLQNWCE 558 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 +L + F +A+ + +I Q Q + Q + + + L L+++ Sbjct: 559 YFSFVLKSNFEENADNQNEYNIILTQLQKMSERADLLQMNEVIAAEIAIKSLNSALEEQS 618 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 S F++ + C+L+PMRSIP KV+C+LG+N+G PR GFDLM++ ++GDR+ Sbjct: 619 SSHGFISRGITFCSLLPMRSIPVKVICMLGLNEGQLPRTNHRSGFDLMNKNWRQGDRTMS 678 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 DDRYLFLE+L+SA++KLY+SY+G+S +DN E PSV++ E ++YI + Sbjct: 679 LDDRYLFLESLVSAREKLYLSYVGQSERDNEEIPPSVILAEFMEYIKKIAPDFQITQHAL 738 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP 829 + R + +S E A + + Sbjct: 739 NAFNPRYFQDEDNDLASLSQLHFRAAQSLLKSREPEREVPALFCEQELDLPEEIKSQDGF 798 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNF-RTEDSEIPDTEPFI-LEGLSRYQINQQLLNA 887 + LE L +F+A+ + F + +L + + + SE+P+TE F + L +++I L+ A Sbjct: 799 IDLDLEDLAKFFANSAKTFLRCQLGTSLWKDQVSELPETEAFAQVNALEQFKIKSTLIEA 858 Query: 888 LVEQDDAERLF-------RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQS 940 L+ +D A G LPYG G +E + +++A++++ + + Sbjct: 859 LIHKDPDLDEESFKIQMQELVLADGSLPYGLKGIECFEQIYGDSEKVAEQILLHKGEHKE 918 Query: 941 MEIDLAC-----NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGE 995 +++ +++ L + LL + P ++ +++L AS + Sbjct: 919 EQLNFTLTFELSEKIRLNCSLSGIYQQNLLTYHPGKDKFKHLIKHCIKYLAL-ASVEPRK 977 Query: 996 SRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQND 1055 ++ +D ++ + + A L Q++E Y G+ PL LP + + + Sbjct: 978 KLHYINQDKAYQIHEI--KDARQSLEQILELYLSGLKKPLAFLPNCFQKYYEQRKLKKPK 1035 Query: 1056 AMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIV 1106 ++ AY+ + D +Q + + P + Sbjct: 1036 EHEVAMGLAEQKW-----AYDSYNNAFADSVDNSFQVCFGKDFPYEDALLC 1081 >UniRef50_D2PR48 Exodeoxyribonuclease V, gamma subunit n=12 Tax=Actinomycetales RepID=D2PR48_9ACTO Length = 1102 Score = 458 bits (1177), Expect = e-127, Method: Composition-based stats. Identities = 290/1179 (24%), Positives = 480/1179 (40%), Gaps = 141/1179 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG------ 55 L ++ + R DVL + ++ L DPF E+++V + G+ +WL L+ + G Sbjct: 3 LYLHRAERTDVLADGLGELLAT-PLADPFAEELVVVPAKGIERWLSQRLAHRLGAAEGSG 61 Query: 56 --IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRH 113 + A + F P S + + + ++ + +M+W L+ +L + L+ + Sbjct: 62 DGVCAGVRFTSPRSLVSAVL-----GLDQDDPWAADAMAWPLLAVLDESLDDAWCEPVAR 116 Query: 114 YLTDDSDKR-------KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEG----LGEAQ 162 +L + + ++++ A LF Y V RP L W G +G + + Sbjct: 117 HLGQFDSGAEAELRRGRRYAVAARLARLFAAYAVQRPALLVDWGDGRDTDGRGVTIDDDL 176 Query: 163 AWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPV 222 AWQ LW+ LV+ P H + + Q + LP+R+ + G + LP Sbjct: 177 AWQPELWRRLVDRIDAPPPPARHLSTVAQ------LRDRSESLDLPARLSLFGHTRLPLT 230 Query: 223 YLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSEN 282 ++ L AL +H ++HL +P W + + Sbjct: 231 EVELLSALAEHRDVHLWLPHPSGELWDRLTGRTAGDR----------------------- 267 Query: 283 AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDI 342 Q +PLLA+ G+ R+ L+ + + ++LL +Q+D+ Sbjct: 268 ----AADTSHQMAEHPLLATLGRDSRELQLALAAVPAVDR-HLPSPAARESLLGWLQNDL 322 Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 S R D S+ H CH R+V+VL D LL ML+ DPT Sbjct: 323 R-------------GNKVSAEGRRPAAEDRSVQVHACHGTARQVDVLRDVLLGMLQADPT 369 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADR------YLPYAISDRRARQSHPVLEAFIS 456 L PRDI+VM DI++Y+P I A FG DR L ++DR Q++P+L Sbjct: 370 LEPRDILVMCPDIETYAPLISARFGLGDLDRYGHPAHRLRVQLADRSLTQTNPLLGVASQ 429 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 LL L SR + VL L + + RF T++ L + WV E+G+RW D + L Sbjct: 430 LLDLAGSRATASQVLDLAETEPVRRRFRFTDDDLDTVTAWVREAGVRWAFDRGDRDRFGL 489 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSV-LPYDESSGLIAELVGHLASLLMQLNIWR 575 Q+TWRFGL R+L G M + W LP D+ EL G A + +L Sbjct: 490 ADYPQNTWRFGLDRVLAGVTMSADAHAWIGTTLPLDDVGSTRIELAGRFAEYVDRLRAAT 549 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 L +PL WL RD + A+ + + +++ + A + L Sbjct: 550 DRLDGTQPLATWLDALRDGIERLTRVGADDGWQVGQVHREFAEVAAGAGELAVT-PLRLP 608 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 +R L+ L F +G + +CT++PMRS+P +VVCLLG++DGV+PR G D Sbjct: 609 DVRSLLSAHLAGRPTRANFRSGSLTVCTMVPMRSVPHRVVCLLGLDDGVFPRFGLADGDD 668 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 ++++ P G+R R +DR L L+A+++A + L I+Y G + R P+V + EL+D + Sbjct: 669 VLARCPVTGERDVRSEDRQLMLDAILAATESLVITYTGANEYSGQPRPPAVPLGELLDAL 728 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER-----QSYAREWLPAA 810 +E+ V+ + H PFD +N + G ++ L AA Sbjct: 729 -------------DRTTESPVRETVVVNHPLQPFDRKNLEAGRLGTPGPFTFDPAALVAA 775 Query: 811 SQAGKAHSEFVQPLPFTLPET----VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 G + L L V L L F+ PV+ FF+ L V E + D Sbjct: 776 RVGGGSRPPRPAFLAEPLTLPGGEDVALADLLAFFRDPVKGFFRA-LDVTLPWEVDGVSD 834 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 P ++ L ++ + ++L ++ + G LP G G + Sbjct: 835 AMPVEIDNLEKWSVGDRMLRDMLAGIHPDAALNAEWRRGTLPPGRLGWRTATDLRDIARG 894 Query: 927 LA-DRVIACRQPGQSMEIDLAC-NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 LA + + ++D+ G ++TG +P V L+ S L Q + W++ Sbjct: 895 LAVAAYPHRQGGATAYDVDVDLGGGRRLTGTVPGVHGYRLVSVSYSRLDAKQLLTSWIQL 954 Query: 985 LVYCASGG-NGESRLFLRKDGEWR------FPPLAAEQALHYLSQLIEGYREGMSAPLLV 1037 L A+ + + L + + R F P+ A QA L+ LI Y G PL + Sbjct: 955 LALSANDEDHNWTALAIGRPRSGRTPASRLFGPVGA-QARTLLADLISVYDGGRREPLPL 1013 Query: 1038 LPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQL 1097 ++ AW + DD + A ++ A GE D + R+W Sbjct: 1014 PLKTSFAWCQARRT--------DDEPMIAAGRRWRPA-----NYDGENADPAHVRVWGPN 1060 Query: 1098 TPE---------------TMEAIVEQSQRFLLPLFRFNQ 1121 P + + R P+ RF Q Sbjct: 1061 APLKVLLEPTRPGEQWPGEPTRLGAYAARVWEPMLRFEQ 1099 >UniRef50_Q14GK3 Exodeoxyribonuclease V gamma chain n=16 Tax=Francisella RepID=Q14GK3_FRAT1 Length = 1079 Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats. Identities = 276/1140 (24%), Positives = 500/1140 (43%), Gaps = 120/1140 (10%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L Y SN+L+ L ++ +++ E+ D F P ++V S GM WL M L++ IA N+ Sbjct: 3 LYTYPSNKLEYLVQVLSKLLDVEKK-DLFTPTQLIVGSRGMQHWLNMQLAEYRNIAMNLK 61 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLER---------------- 105 + + +I D+ + + + A+ K ++W++ LL + Sbjct: 62 YDMINGYILDICYELTAKQEYKKAYTKDILAWRVFRLLSSQNQEKNTHSHAGGNLIADGL 121 Query: 106 --------------EDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWET 151 + L+ Y D K +QLS K A+ F +Y+ YR +WL +WE Sbjct: 122 SSKDTSLCGYDNRDGWSSKLKEYYQD--SDLKKYQLSVKIAETFSKYISYRSEWLQKWEK 179 Query: 152 GHLVEG--LGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPS 209 + L + WQ +W+ LV+ + ++ L+ + S Sbjct: 180 DEYINPSKLENDEDWQMLIWQNLVKDI------AETPYKVQLEALQKLDKQNLEKLNISS 233 Query: 210 RVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSF 269 ++I G++ + P L+ + L K+I +H+L+ NPC YW D+ A L + Sbjct: 234 DIYIFGVNTISPKNLKFIFELAKYINVHILYINPCSEYWYDLHKSKISAWLDSDDYEI-- 291 Query: 270 EDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV 329 PLLA+ G+ G+++ L + E QEL+ F Sbjct: 292 ---------------------------QPLLANLGQQGKEFFNQLLENEQQQELEVFEKF 324 Query: 330 TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVL 389 ++L +D N+ D + D SI+ + CHSP REV++L Sbjct: 325 DKESLAFEKLAD----NNQTQLVSLQRNLLELDCQNHTKQKDLSISINSCHSPLREVQIL 380 Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 HD+LL M++ DP + PRDI+VM +I+ YSP+I +VF P D+ LP +I+DR S P Sbjct: 381 HDKLLDMIKADPNIKPRDILVMCPNIEDYSPYIDSVFSRYPTDKKLPCSIADRTLLDSEP 440 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 + +FI LL LP+S F +L L VP + +F IT+E L +R W+ ES I + Sbjct: 441 LAASFIELLQLPESNFEVNKILDYLAVPAIQQKFKITDEQLEAIRYWLKESCIHHSNN-- 498 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS-VLPYDESSGLIAELVGHLASLL 568 +W +GL R++LG++ + ++ G +G L LL Sbjct: 499 ---------DQTFSWSWGLRRLMLGFSYSDSNYIIDDKLMTVPVIEGSEIAELGGLYELL 549 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 L + + L + R L W +M + F + + I+ + Sbjct: 550 ELLERYSQNLLKPRSLANWQVYLLEMFDDVFDVTNDEQYIAKKIKDIIAKTVTTAKNILL 609 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + L +R L +L + I+ FL G V C++ PMRS+PF+V+ +LG+N+G +PRQ Sbjct: 610 DQEIDLYTIRYCLISQLSEPIINNHFLNGKVTFCSMTPMRSVPFRVIAMLGLNNGKFPRQ 669 Query: 689 LAPLGFDLMSQK-PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 + + FDL+++ K+GDR++RDDDRYLFLEA++SA+ LYISYIGRS++ N E+ PS++ Sbjct: 670 ESAISFDLIARLGRKKGDRTKRDDDRYLFLEAILSARDYLYISYIGRSVKTNVEQQPSLI 729 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 ++EL Y+ ++ ++ + F + Y R Sbjct: 730 LKELTSYLNLNYDWGKED---------------IKEYPLHAFSSKCYSDSYRSFDKAWLK 774 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 S+ + LP+ + + L + + P++A+ L++ + E+ D+ Sbjct: 775 LLQSEPRGFYDSASLSNCANLPKNLSISKLVKVFDDPIKAYANYALELYLEDDFEELEDS 834 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 EPF + L ++++ Q LL ++ D + + + +G LP +I + + + +Q+L Sbjct: 835 EPFDINSLDKHKLKQALLKTFEDEKDKDLTIKTAKLSGKLPESVLTDIEIKEEVENIQKL 894 Query: 928 ADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVY 987 D++ + ++ ++ ++ + + ++ PS L++ + +L+L L+ Sbjct: 895 LDKMSLASYESKYFHQEILGYELEANCYI---KNNQIMLSTPSSLNIGKKFELYLIALLV 951 Query: 988 CASGGNGESRLFLRKDG----EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGG 1043 S S ++ + E+R + A L I + + P L Sbjct: 952 AYSEQRDISAVYYGIEKNQVEEFRVENIEYTTAKGILEHYINQAEQIVVKPQLAHLSLAE 1011 Query: 1044 AWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETME 1103 A + ++T +K + + + + + +D Y +L+ P + Sbjct: 1012 AICDSK-----------NNTDKKKQQAWQKVIKSSQHNFKTLEDNSYFKLFYNKFPTVDD 1060 >UniRef50_A9BB00 Possible exodeoxyribonuclease V subunit C 125 kD polypeptide n=1 Tax=Prochlorococcus marinus str. MIT 9211 RepID=A9BB00_PROM4 Length = 1105 Score = 455 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 230/1168 (19%), Positives = 438/1168 (37%), Gaps = 113/1168 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +Y SNR + L ++ + E I+V + +WL +++ GI+A + Sbjct: 1 MLTIYRSNRAEWLANVLAEQLRANPPG-LSENVEIVVNTWPTGRWLGEEIAKINGISALV 59 Query: 61 DFPLPASFIWDMFVRVLPE--IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 FP PA+ + + + L I + + + W ++ LP+LL++E+ +L+ +L D Sbjct: 60 RFPFPAAQLKTLVRKFLGIEVINDDDPWEANQLIWPILNSLPELLQKEEAGVLQKWLERD 119 Query: 119 SDKRKL-----FQLSSKAADLFDQYLVYRPDWLAQW-----ETGHLVEGLGEAQAWQAPL 168 + +QL+ A FD+Y++YRPD ++ W E +L L + WQ L Sbjct: 120 LSQSGKLSRDEWQLAKTIAYTFDEYIMYRPDVISDWWGTENEINNLKSKLPKYIQWQPIL 179 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQ 228 L + Q + L+ LPS + I GI++L PV L+ +Q Sbjct: 180 INLLKQRITQ-----EPFGLQVRNVASKLKKGIAPKQNLPSDLRIFGINSLAPVQLELIQ 234 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 AL +E+ + PC+ W K + ++ N Sbjct: 235 ALSCIMEVKVFLLTPCKDLWSRCKTKRE----------------------EYGEGWKVAN 272 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLS-----DLESSQELDAFVDVTPDNLLHNIQSDIL 343 L A+ G++G ++ LL L E D F L + +L Sbjct: 273 DKLWLLNKQRLEATLGRMGSEFEQLLEGSGEYQLGEWDEKDLFAMPATIALNKQRKPTLL 332 Query: 344 E-LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 E ++ R V IE RS DSSI+F C P+R+++++ D++L L + Sbjct: 333 EQIQQRLVTNECIEPLQRSL-------DDSSISFTECPGPKRQIQIVRDQILQQLALNKN 385 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSA-PADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 L P+DI++M ++ ++ I ++F LP+ I+DR + + I L+ + Sbjct: 386 LEPKDILIMTPQVEKFAHLIPSIFNDVSATGVTLPWKITDRSQYDQPGLTQCIILLMEIA 445 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 +R + ++ LL PV+ + + + + + + E+G RWGI+ Sbjct: 446 CTRLTASNLDQLLTNPVIKDLYKLDDSEIDKITNCLQETGFRWGINSLER-----DGEET 500 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 HT + L R L+G + + G + G+ + +L ++ +GL Q Sbjct: 501 HTLNWCLERWLVGMVIPTIPGLVLGGIAPFS-KGISISELSKWWEILSKICNMLQGLRQS 559 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 +W V + + + D + + I + + + ++ + + Sbjct: 560 HSCMKWGLVLKGLCDDLCNNDRKWSWERQRFLRAIDDWIRAAD--CFKKEIKIEVVAEIV 617 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 + +E G + I L PMR+IP K++ L+G+++ ++PR+ GF L+ K Sbjct: 618 KDLIAKEAGRFGHRTGRITISALEPMRAIPHKMIVLMGLDETIFPRKQQRPGFSLLDHKH 677 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 GD D DRY+ LEALIS ++ L I++ GR + PS VQ+ +Y+ Sbjct: 678 FLGDPRINDKDRYVLLEALISTRETLLITWDGRDEKTGDSLEPSSPVQQFFEYLQHELGE 737 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFV 821 L S + + P +R R+W+ A + Sbjct: 738 KSSMGLLKKPSPNPLNKNNFLSCNNQP----PISCDKRDLETRQWMNAKQGSRGLTLALP 793 Query: 822 QPLPFTLPETVPLET---LQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRY 878 + L+ + A P + + ++ R + I D + + L ++ Sbjct: 794 LNWNLSKNAVNSSSDNELLKSWLATPQLKWLEQ-FHLHPREWNKPIEDLDSLSIPELIKF 852 Query: 879 QINQQLLNALVE------------QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 +I +Q L+ + ++ ++ G P + + E + Sbjct: 853 KILKQEFTELITSSNNQIISPEINERESPNWQDKYLGQGVFPPKSAATLESEILGRRWTS 912 Query: 927 LADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV 986 L + + + ++ G + + + + L + WL HL Sbjct: 913 LIKSLSKLGEVKRDSLMEDNETGEIL------IANNCTVLVEIGRLKAKTILNTWLTHLK 966 Query: 987 YCASGGNGESRLFLRKDGE----------WRFPPLAAEQALHYLSQLIEGYREGMSAPLL 1036 A + + + + + + P+++ +A L +L + G+ Sbjct: 967 LSAYHKSTKKTVVIARSDSNTKIDSYEVMLSWHPMSSIKAESILDELKQQAHNGLKQCWP 1026 Query: 1037 VLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ 1096 V PESG K Y ND F +A+ G+ GE + Q + Sbjct: 1027 VPPESGWKLAKARYKKSNDCNEI-----------FRRAWIGDFNKEGERNKPEMQLCFGY 1075 Query: 1097 LTPETM----EAIVEQSQRFLLPLFRFN 1120 + E + + PL Sbjct: 1076 KAAPEIFLENELFDQCLELLYKPLIAQL 1103 >UniRef50_Q7VBK2 Exonuclease V gamma subunit n=1 Tax=Prochlorococcus marinus RepID=Q7VBK2_PROMA Length = 1103 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 224/1159 (19%), Positives = 433/1159 (37%), Gaps = 104/1159 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML VY SNR + L ++ + + PF+ I+V + ++WL ++ GI+A I Sbjct: 1 MLTVYRSNRAEWLAEVLAAQLRLNKPK-PFQSVEIMVNTWPTSRWLSEQIATFNGISALI 59 Query: 61 DFPLPASFIWDMFVRVLP-EIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 +FP P S + L E+ + +N ++W+++ +LP+LL+ E+ L ++ S Sbjct: 60 EFPFPNSHLRKFVQLFLGLEVTSKDPWNTNQLTWEIIDVLPKLLKEEESKHLHEWIQKGS 119 Query: 120 D-----KRKLFQLSSKAADLFDQYLVYRPDWLAQWETG-----HLVEGLGEAQAWQAPLW 169 + ++++ L+ A+ ++Y++YRPD +AQW + L WQ L Sbjct: 120 NNNKELDKRIWTLAKSIANTINEYILYRPDVIAQWWNLDSKPTKSLRDLPPHIKWQPLLL 179 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 + L + L+ LP + I G+S+L P+ ++ +QA Sbjct: 180 RLLKTKIKS-----EPICLQINEVVTRLKRKEHSSKELPRDLLIFGVSSLAPIQIELIQA 234 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L + + + P + W K D ++P+ Sbjct: 235 LSSVVNVQIFLLTPGQDLWKRCKSRRE----------ELGNDWKVPMDGMWMLKTPRIE- 283 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLS-----DLESSQELDAFVDVTPDNLLHNIQSDILE 344 AS G++G ++ LL L QE D F ++ + LE Sbjct: 284 -----------ASLGRMGSEFQQLLEGSGEYQLGEWQEKDLFSMPVKIATYNSKEPTFLE 332 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 ++ +K D+S+ F +R+V+++ D+++ L D TL Sbjct: 333 QLQESLVVNKASIQLHRKHK------DNSLIFLESPGQRRQVQLIRDQIIQWLATDDTLQ 386 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSA-PADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 PRDII+M + +P I +VF + LP+ I+DR + +++ + + + S Sbjct: 387 PRDIIIMTPQVKRLAPLISSVFNDISATNVNLPWKITDRSQIEKPGLIQFILEFIDIASS 446 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 R + ++ LL P L +F + ++ + + + E+G RWGID+ + H+ Sbjct: 447 RLTALNLDRLLTNPALQNQFKLDQDEVDRITYCLYETGFRWGIDEKDRN-----GNSTHS 501 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + L R LLG + + + + S+ + E + +LL L + L R Sbjct: 502 LEWCLERWLLGIVLPNEPNFVEGDIAPFSSTFTVNE-ITKWWNLLSLLCKHLKALRNSRK 560 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 +W+ + ++ ++ L + + + ++++ L + Sbjct: 561 SNQWVFQLKSIVTDLLENESNRTWEGELFNITIENWSQDSNDCILN--IQPLVIKEILTE 618 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 E +G + I L PMR+IP +V+ L+G+++ V+PR F+L+ QK Sbjct: 619 LFSLENGRFGHRSGKITISALEPMRAIPHRVIVLMGLDELVFPRSEERPSFNLLEQKRLL 678 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 GD + D DRY+ LEA++S +Q L I++ R + + + + IDY+ Sbjct: 679 GDPNNCDKDRYVLLEAIMSCRQHLLITWNSRDEKTGEKLEAPAPINQCIDYLKNELSESD 738 Query: 764 DEALNCDESEARVK-AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQ 822 L + + + P R P + G + Sbjct: 739 QLGLVQSPPPNPLSNENFIATEYQQPISCDRRNLEARIFLDNFTKPKQTALGIPFRWEIN 798 Query: 823 PLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 + + ++ + P + + LQ+ R + I + F L L RYQ+ Sbjct: 799 YKFKE--SILTNDIVKSWLRAPQITWLEH-LQLRSREKKISIETIDTFNLNELQRYQLLN 855 Query: 883 QLL----------NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI 932 + L N L A+ ++ R G LP + E+ E + L+ + Sbjct: 856 EELFTQNNLESDNNVLPILLGADDWQKKLRGQGILPPKSAAELECEILEARIASLSSLIR 915 Query: 933 ACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGG 992 + + + + + + +L L A M WL+HL C Sbjct: 916 DL-GELEEKNLQINNENIT-----YLIIQEDILVVEIGKLKSATIMSAWLQHLQVCLYDD 969 Query: 993 NGESRLFLRKDGE----------WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESG 1042 L + + F P+ + A+ L + +G++ V P+SG Sbjct: 970 KPRKTLIISRSTTKSSQHQYKLSAEFTPILKKDAMEMLQTIYMLVEQGLTECWPVPPQSG 1029 Query: 1043 GAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR---QLTP 1099 K Y + ++ F + ++G+ GE + + Sbjct: 1030 WELFKARYMKKTNSN-----------NYFKKKWKGSFNQHGENHNSEMILCFGYDCDAEL 1078 Query: 1100 ETMEAIVEQSQR-FLLPLF 1117 I E P+ Sbjct: 1079 FLGNKIFENCLNILYQPIL 1097 >UniRef50_A2C3H2 Possible exodeoxyribonuclease V subunit C 125 kD polypeptide n=2 Tax=Prochlorococcus marinus RepID=A2C3H2_PROM1 Length = 1097 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 213/1158 (18%), Positives = 433/1158 (37%), Gaps = 104/1158 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +Y SN+ + L ++ + + E I+V + ++WL LS I A + Sbjct: 1 MLTIYRSNKAEWLAEILGQELRLNPPE-ITEEVNIIVSTWPSSRWLSEKLSIINNINALV 59 Query: 61 DFPLPASFIWDMFVRVLPEIP-KESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLT--- 116 +P P +++ + R++ P ++ + K + W ++ LLP+L++ E+ ++R +L Sbjct: 60 KYPFPGTYLKRLVKRIIGIDPDEKDPWEKNQLVWNILELLPELMKEEEAQVIRSWLEISD 119 Query: 117 --DDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 D L+ L++ A+ FD Y++YRP+ + QW + + E + LW+ ++ Sbjct: 120 KKDTQINLNLWDLANNIAETFDDYILYRPEIIKQWLSKKTKKRSREISVNKNILWQEILF 179 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 + ++ I+ L+ P +++ G+S+L P+ + +QA K I Sbjct: 180 NLLYKKINKDPFCIQVEKAIKRLKKDDISKLDYPKNLYVYGLSSLAPLQIDLIQAFSKVI 239 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 I + +PC W + + D + Sbjct: 240 NIKIYIISPCNDLWQRCEARRLQFR-----------------------NTWNTPPDRQWL 276 Query: 295 VGNPLL-ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL----ELENRA 349 + +P L A G++G +Y LL Q D + + ++ +DI N Sbjct: 277 IESPRLEAFLGRMGAEYQQLLEGSGEYQLGDRNEED-----IFSLTADIATNKGNKPNLL 331 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 ++S+N + D S+ F R+VEV+ D +L + ++ + PRDI+ Sbjct: 332 EQLQQELLSTKSENILTKEKSDKSLLFLKSPGKYRQVEVIRDYILQLFSDNREIQPRDIL 391 Query: 410 VMVADIDSYSPFIQAVFGSAPAD-RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 +M +DSY+P I +VF + + LP+ I+D+ ++ ++L + SR + Sbjct: 392 IMTPQVDSYAPIITSVFNNIDKNTTQLPWVITDKSQEDKVGLIHFVLNLFEISVSRLTAS 451 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 LL P L + +I+ + + + + + +G WG+D H+ + L Sbjct: 452 IFENLLINPALRTQQNISIDEVSDIIKNLQSAGFTWGLDSSERY-----GEETHSLCWCL 506 Query: 529 TRMLLGYAMESAQ-GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 R LLG + + PY E + + +L +L + + +R +EW Sbjct: 507 ERFLLGLVLPDNPINGISHISPYSE--NISSAEFIKAWGILSKLCNYIDVIRSKRSCKEW 564 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 + + ++ F E + + + +++D + + L Sbjct: 565 IKLITSLVKDLFGDGGEWAWEEQQLLTVVNNW--GLITDNCELEIDCLVVKDIITKALSS 622 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 G + I L PMR+IP K++ ++G+ +PR F+L+ +K + GD + Sbjct: 623 TNGKFGHRTGKITISALEPMRAIPHKIIIIMGLESRTFPRIENRRSFNLLERKRELGDPN 682 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 + D DRY LEALIS +Q L +S+ + + + P +Q+ ++Y+ + + Sbjct: 683 QYDKDRYSLLEALISTRQNLLVSWNSKDEKTGEDLEPPSPIQQWLNYLKIKLGDNTFKDI 742 Query: 768 NCDESEARVKA-HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 + + + R+ + + Sbjct: 743 LIEPPANPLDHFNFIKTENSQIMSCDRKNLEAREWLEKAIPTKNISLALPLKRKEINVSE 802 Query: 827 TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQIN-QQ-- 883 + + + +P + + ++ R + I D + L L RY++ + Sbjct: 803 LKSYSFEKT--KEWLLNPQITWLKEH-EIQSREFVNLIEDNDFLELSELERYKLLKHRLQ 859 Query: 884 ---LLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ---- 936 LLN ++D+ + G P G I + + L + A + Sbjct: 860 SSDLLNINHTKNDSNYWEENYSGKGVFPPKGSGLIEKDLLQERWNNLISAIYATGKITKR 919 Query: 937 --PGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNG 994 Q +E + G + ++ L M WL HL A+ Sbjct: 920 SIEMQELEGEFYFGGKNL------------IQIEVGSLKYKTLMNGWLNHLYLSANSSFN 967 Query: 995 ESRLFLRKDGEWR----------FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGA 1044 L + K ++R P+ ++A L QL G + + PESG Sbjct: 968 YKTLIISKKTDYRKKIQFEVSKEILPINTKEAKKNLRQLHRLATAGRNNCWPIPPESGLD 1027 Query: 1045 WLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ----LTPE 1100 + D + F + +EG++ +GE + + + + + T Sbjct: 1028 YALATKDNNKNEQ-----------DLFQKKWEGDLYRQGERETLAMELCFGKKCKASTFL 1076 Query: 1101 TMEAIVEQSQRFLLPLFR 1118 E+ + P+ + Sbjct: 1077 DFESFNDVLMTLYEPILK 1094 >UniRef50_Q89AB4 Exodeoxyribonuclease V gamma chain n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=EX5C_BUCBP Length = 1111 Score = 447 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 270/1123 (24%), Positives = 529/1123 (47%), Gaps = 25/1123 (2%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M +Y S + ++ ++ E L +P E+ +V + QW+++ +++K+ + NI Sbjct: 1 MFTLYKSLKFNLFVKSAFKVILNEPLLNPLTKEIFIVNNKETEQWIKIFIAKKYKVCTNI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 F FI ++ + P++ +S F+K S+ WK++ + P + LL ++ ++ Sbjct: 61 KFFKLKHFILNILKQNTPKLYSKSEFSKYSIMWKIINI-PDIQH-----LLTKIVSKNNT 114 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 LF+++S ++LF YL YRPD++ +WE + Q WQ +W +++YT Sbjct: 115 YSTLFKIASSISNLFQLYLKYRPDYIKKWEQKSNIPKTRLKQKWQQIIWMRIIKYTKDAN 174 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 +P H +NL I+ ++ LP R+FI I+ + P Y L+++ K+ +H + Sbjct: 175 KPILHFSNLLYDSIKKMQRNNFINTKLPVRIFIFNITPITPQYAIFLKSISKYCSVHFFY 234 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 K + + +L S+N +++ Sbjct: 235 ATASYNDKQMFSTSFIKFK-----QTQEISNNQLLSLLHSKNKNIIYHEIENFQKNTKFQ 289 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 + W + L L + ++ + ++LL +Q+ IL L + E Sbjct: 290 SYWITYEYE-QMLFLSLIKDKTINLNFKIKQNSLLQYLQNKILNLHSIQKKNNEQENN-- 346 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 K + D S++ H CH+ RE+EVLH+ LL +L ++ + +D++V+ ++D+Y P Sbjct: 347 ---KILILKTDKSLSIHSCHTLIREIEVLHNNLLNILNDNNDILFQDVLVISKNLDTYIP 403 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +I +F SA + ++P++I+ + ++ + + L+ LP+ + LL++P L Sbjct: 404 YINQIFNSASSKNFIPFSINYK-NIKNIEFYKTILELIDLPNIELNINKITNLLNIPTLL 462 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 + I E+ + L Q +N++ I+W D+ + L W GL R+ LG + + Sbjct: 463 KKVQINEQEIPILLQIINQTEIQWENDNILSNDW-LSNDITKCWEHGLQRIFLGQIINNI 521 Query: 541 QG-EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 W++++PY+E S L + L SL+ LN W++ L++ + L W + +LN FF Sbjct: 522 DYKFWENIVPYNEFSTLYYNIFNKLISLISLLNKWKKILSKPKFLSHWDITFKKLLNDFF 581 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 + + LI ++W II G+ +Y + ++LL++EL + S +G + Sbjct: 582 TDHEQKQPEAKLIIKKWTEIIHSGMQEKYTKKISITLLKNELCNSVSYISQSNYLFSGKI 641 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF-DLMSQKPKRGDRSRRDDDRYLFLE 718 C + +IPFK++ L+G+ND + +L+ P+ D + + L L+ Sbjct: 642 TFCNNFTLTNIPFKIIYLIGLNDNISSNTHESFDIYNLLKLHPRAYDPCDEINHKNLLLK 701 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 L+SA++ YIS+ S + + ++I YI Q Y+ N +++ +K+ Sbjct: 702 TLLSAKKFFYISHQIVSNNYKKLNNIPIAIDKIIKYITQYFYIKNKNKDNFNDNLKDIKS 761 Query: 779 HLTCLHTRMPFDPQNY-QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETL 837 H+ +T + +N+ + ++ A+ +H EF++ LP +T+ TL Sbjct: 762 HIYHNYTFYAHEKRNFLEKLNYPNFNTTIWKMATLINNSHKEFIKKLPSIKNQTINYNTL 821 Query: 838 QRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL 897 FW +P++ FF +RL + T ++ + L +Y++N+ LL + + + +L Sbjct: 822 ILFWKNPIQTFFHVRLNIQLNTTKNKHMHQNKHFINKLDQYKMNKTLLKFFLYKQNTNQL 881 Query: 898 FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC-NGVQITGWL 956 F+ ++ G +P G I WE + + L D+++ ++ + + + N + G L Sbjct: 882 FQYYKNIGIIPNNNIGNIIWEYTKKLITPLYDQIMKIKKILNNSKFCINVKNKCMLHGQL 941 Query: 957 PQV-QPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQ 1015 + GLLRW+ + LS + WLEHL+YC+ S L F L + Sbjct: 942 KNINSSGGLLRWKATKLSFQDIISCWLEHLLYCSLYKKHNSILIGTNHQIITFYKLENKT 1001 Query: 1016 ALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAY 1075 A +YL + I GY +GM P+ +L +SG W+ YD +N+ + + A FL + Sbjct: 1002 AKYYLKKYISGYFDGMEQPI-LLTKSGINWINAIYDKKNNKFYTNTNKNLNAYKIFLNTW 1060 Query: 1076 EGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 GN + GE DD + Q++ LT + ++ I + ++++L P+ + Sbjct: 1061 NGNNWITGEKDDPYIQKMIVYLTKKNIQKIYKTTKKWLTPILK 1103 >UniRef50_C8XGX0 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XGX0_NAKMY Length = 1141 Score = 444 bits (1142), Expect = e-123, Method: Composition-based stats. Identities = 281/1176 (23%), Positives = 457/1176 (38%), Gaps = 140/1176 (11%) Query: 24 ERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG--------IAANIDFPLPASFIWDMFVR 75 E DPF +++ V + G+ +WL L+ + G I A + FP P + + + Sbjct: 24 EPPADPFGVDVVAVPTRGVERWLTQRLAHRLGTRDGRSDGICAAVRFPSPTTLVDE---- 79 Query: 76 VLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKR-------KLFQLS 128 L + + + W L+ + + LL +L D + + ++ Sbjct: 80 -LAGDRADDPWTPDAAVWPLLAAIEASVHEPWCALLAEHLGYRGDDAQAEHRRGRRYAVA 138 Query: 129 SKAADLFDQYLVYRPDWLAQWETGHLVEGLGE----AQAWQAPLWKALVEYTHQLGQPRW 184 + A LFD Y +RP+ +A W G +G GE +WQ LW+ L + Sbjct: 139 RRIAGLFDGYAEHRPEMVAAWSQGGDDDGWGEPVPADLSWQPRLWRRLRD-----RIDAP 193 Query: 185 HRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPC 244 + + L + LP RV + G +ALP + L AL H ++HL +P Sbjct: 194 DPVATFAQVAARLAA-DPGAVDLPERVSLFGATALPHRQVLLLSALAHHRDVHLWLPHPS 252 Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWG 304 W + + R+R +PLLAS G Sbjct: 253 PVLWDRVGELRPPVPGRIRRRDDPTAGAAT----------------------HPLLASMG 290 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK 364 + R+ +L ++ D P LL +Q D N +K Sbjct: 291 RDVRELRTVL-AGRIDRDTWHRADDPPATLLGRLQRD---------LSDNRRPGPGMADK 340 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 +D D S+ H H P R+V+VL D ++ +L +DPTL P DI++M DI++++P +Q Sbjct: 341 PVVDATDDSVRVHAAHGPGRQVDVLRDVVIGLLADDPTLHPADILIMCPDIEAFAPLLQG 400 Query: 425 VFGSAPA------DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 FG A + L ++DR RQ++P+L LL L SR + DVL Sbjct: 401 AFGLADSVPDGHPAHQLQVRLADRALRQTNPLLATLDRLLDLAGSRVTASDVLDFAAFAP 460 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 + RF ++ L L WV +G RWG+D ++ R L GQ+TWR L R+LLG M Sbjct: 461 VRHRFGFDDDELSTLADWVAAAGARWGLDAEHRRRYGLAEYGQNTWRAALDRILLGVCMS 520 Query: 539 SAQG-EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 G ++ LP DE +L G LA L+ +L L+ ++ W + + Sbjct: 521 DEPGNRLETALPLDEIGSADVDLAGRLAELIDRLATVVDTLSSRHSVQRWCAELLAGVQS 580 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD-AVPLSLLRDELAQRLDQERISQRFLA 656 A + + A+ A + L+ +R LA L F Sbjct: 581 LTSVPARAAWQVAEFRAEVAAVQRHAAAAGSTGLELGLADVRALLAGALAGRPTRANFRT 640 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 G + +CT+MPMRS+P +V+CLLG++DGV+PR G DL+ ++P G+R R DR L Sbjct: 641 GTLTVCTMMPMRSVPHRVICLLGLDDGVFPRGAREDGDDLLIREPACGERDLRSQDRQLM 700 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 L+A+++A +KL I+Y G + ++R P+V V EL+D + + + V Sbjct: 701 LDAIVAATEKLVITYSGADERTGAQRPPAVPVGELLDALDDTATT---------ATGGAV 751 Query: 777 KAHLTCLHTRMPFDPQ-----------NYQPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 + + H PFD + + L + P P Sbjct: 752 RDLVLVRHPLQPFDARTLTAGALGRVGPFTFDPVALGGARALAGPRRPAGRLVPAPLPAP 811 Query: 826 FTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL 885 P V L + HP + F + RL V E + PD P L+ L + + ++L Sbjct: 812 DRPPADVELAEVIEVLTHPAKGFLRRRLDVAVPFEQDDPPDDLPVDLDALQEWGVGDRIL 871 Query: 886 NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR-QPGQSMEID 944 + + + G LP A G E ++++ L DR R P ++E+ Sbjct: 872 RDRLAGVPEQECRQAEWRRGVLPPAALGGRALERVLRDVRPLVDRTATLRAAPRHTVEVS 931 Query: 945 LAC-NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN-GESRLFLRK 1002 + +G ++ G + V GL+ S L+ +Q WL L AS + + + Sbjct: 932 VPLPDGRRLRGTVGGVHGIGLVTVSYSKLAPRARLQSWLAFLALTASDPALAWTAAAVGR 991 Query: 1003 DGEWR-----FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAM 1057 R L E+A L L+ Y EG+ APL + ++G + Sbjct: 992 AERGRPQCATLAALPGERARELLIDLVGLYEEGLRAPLPLPLKTGEKYADARRRG----- 1046 Query: 1058 LDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPET---------------- 1101 KA+ + + G GE D R+W + P + Sbjct: 1047 ----MDHDKAQDQAAATWTGGKY-PGERQDAANMRVWGRDAPFSVLTGSGTDPDTGIDTG 1101 Query: 1102 ----------------MEAIVEQSQRFLLPLFRFNQ 1121 + R PL + + Sbjct: 1102 TDPGIDADTGTDRGTATGRFALLAGRLWRPLQQHEE 1137 >UniRef50_C1ACJ2 Exodeoxyribonuclease V gamma subunit n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ACJ2_GEMAT Length = 1101 Score = 444 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 302/1154 (26%), Positives = 500/1154 (43%), Gaps = 109/1154 (9%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L+V + L A ++ + L PF+ ++++VQS GM +W++ L+++ G AA++ Sbjct: 6 LQVVTGDSPHALLAELDRTLTTWPL-SPFDDDIVVVQSLGMERWVRQQLARRRGCAASLQ 64 Query: 62 FPLPASFIWDMFVRVLPE---------IPKESAFNKQSMSWKLMTLL--PQLLEREDFTL 110 P PA+F + + + F +++++W+L LL +L + Sbjct: 65 LPFPAAFCRKLAESLAGIGGPGNETDAPTLDKRFEEEALTWRLFALLSDEDMLADAVYAP 124 Query: 111 LRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGH--------LVEGLGEAQ 162 LR +L +D K + L+ + + FD+Y +YRPD L WE G Sbjct: 125 LRAFLEQ-ADPAKRYGLARRVSARFDEYRLYRPDMLLAWEAGGHASVEGPFDTAAENPHA 183 Query: 163 AWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPV 222 AWQ LW+ +++ G+ H A + IE LE A P GLP R+ + GIS LPP+ Sbjct: 184 AWQCALWQQVLQ-----GERPMHFARWFLHTIERLEQAAIRPVGLPDRLSVFGISTLPPL 238 Query: 223 YLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSEN 282 +++ L+A+ + + P Sbjct: 239 FVRLLKAVSRFAAVRFFVLVP--------------------------------------- 259 Query: 283 AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDA-FVDVTPDNLLHNIQSD 341 + NPL A +G ++ + LL E D++LH++Q Sbjct: 260 ----ADPQLVGRSPNPLTAQFGHASQELLTLLGANEPGGSRHVQAAMPAEDSVLHHLQRA 315 Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 + + + P D S++ H+CHSP RE+EVL D+LL +P Sbjct: 316 LR-------------GSELTPTACLVSPTDRSVSVHICHSPLREMEVLRDQLLDAFAVNP 362 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPA--DRYLPYAISDRRARQSHPVLEAFISLLS 459 L P D++VMV D++ Y+P + VFG A + +P+ ++DR + L+A LL Sbjct: 363 ALRPHDVLVMVPDVELYAPLAEVVFGGAMSESRPRIPFRVADRALARESAPLQALELLLQ 422 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV-RELELPA 518 L SR DVL LL VP + R +T + L WV ++GIRWG D D+ +P+ Sbjct: 423 LVSSRLGVSDVLHLLSVPSVRRRVGVTPAQVEQLTGWVQQAGIRWGWDADDRVSRFGVPS 482 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 +++WR GL R++ GYAM + +P AEL+G + L L Sbjct: 483 FVENSWRLGLDRLMAGYAMGPVDVLVEGHVPVAGDLVGDAELLGVFVRWVDDLERHLMRL 542 Query: 579 AQERPLEEWLPVCRDML-NAFFLPDAETEAAMTLIEQQWQAIIA----------EGLGAQ 627 + RPL W V ++ A + +A M I + QA+ Sbjct: 543 REARPLSTWSTVLAEVFAWAVVPEGSAEQATMAQIAEAMQALREPSGAPRQRRLREAHDV 602 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 V ++RD + LD + + FL G + IC + PMR+IP +V+ +LG++D YPR Sbjct: 603 EDPEVAFEVVRDWILAALDSDDHATGFLTGGLTICAMKPMRAIPHRVIAMLGLDDRSYPR 662 Query: 688 QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 + FDL+ + GDR R DDR L L+ L+ A+ +L++SY+GRS +N+E PS++ Sbjct: 663 RERRPAFDLIGSARRVGDRDPRTDDRQLVLDTLLCAEDRLHLSYVGRSETNNAEIAPSIV 722 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 V EL+ Y+ + + E R++ T D + + + + + Sbjct: 723 VAELLQYLQRMVHTVDKAPHPLLRVEHRLQPFSTAYFVPTATDTALFSFDDVLAASVRDV 782 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 +A + V PL + L+ L W++P + + L ++ R + D Sbjct: 783 TERRKAPPFVARAVTPLHTE--GVIALDDLMLAWSNPSQLHAERTLHLSLRDHRDALDDV 840 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 EP +++ L R ++ Q+LLN ++ R A+G+LP G G + + Q++ L Sbjct: 841 EPTVVDALLRTRLQQRLLNEVLHGAGERGATARLSASGELPPGPLGAAWQQRLAQQVDPL 900 Query: 928 ADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVY 987 RV R + + +DL +G Q+ G L + R R + L ++ W+ HL Sbjct: 901 LQRVGQPRF-LEPLTVDLRGHGWQLVGRLDYQHAEEQWRVRAATLKPRDVVRGWIAHLAR 959 Query: 988 CASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLK 1047 A G G + + D E RF P A+ L L++GY+ ++ P+ + A+ K Sbjct: 960 QAM-GVGGTTRVMALDQELRFAP--QADAMVLLEALVQGYQRMLAEPMPYFLAAAVAYRK 1016 Query: 1048 TCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPE--TMEAI 1105 A L+ AR KF G G+ DD + LWR+ P +A Sbjct: 1017 AIATAS-SGRGAAKPPLEAARAKFAP---GGDYGEGDLDDPYVALLWRERDPFAHHADAF 1072 Query: 1106 VEQSQRFLLPLFRF 1119 V F PL Sbjct: 1073 VALVDAFWEPLEAA 1086 >UniRef50_C7PDT3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PDT3_CHIPD Length = 1063 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 292/1138 (25%), Positives = 487/1138 (42%), Gaps = 105/1138 (9%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID 61 L + SN L+ L + ++ FE +I+ Q+ GM WL++ L++ GIAAN Sbjct: 3 LYLRVSNSLENLSMGLAQTLKA-SNSQVFEQHLIVTQTEGMNNWLKLQLAEYLGIAANCR 61 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLT--DDS 119 F P I ++ L + + ++++W L LL + + RE + + Y + Sbjct: 62 FLKPNDLIHQIY--FLMDGQYSEMLSGRNLTWLLYKLLGEDIFRETYPAVATYYHTTEPD 119 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 K L+ + ADLFDQY +YRP+ + +W E WQ LW E Sbjct: 120 SDLKRMALAERTADLFDQYQIYRPEMINEW--NAPPEDPFAKIDWQQYLW---TEAKKVS 174 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSR---VFICGISALPPVYLQALQALGKHIEI 236 G + + Q ++ L++ L R V + G+S + ++Q L L I+I Sbjct: 175 GHALPDKTIIGQHILDMLKNPD-HQETLAHRMNTVHLFGLSIITAYHVQILHELSSFIDI 233 Query: 237 HLLFTNPCRY-YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 + NP YW D K A+ + R D Sbjct: 234 YFHIINPSPELYWFDDKSEKQQARWRLKGRPIHESDTA---------------------- 271 Query: 296 GNPLLASWGKLGRDYIYLLSDLE---SSQELDAFVDVTPDNLLHNIQSDILELENRAVAG 352 GNPLL WG++ +D L + ++ E + V+ PD LL+ +Q DI Sbjct: 272 GNPLLMGWGRVVQDTFGLFFKYDAFINAYESEGLVEPQPDTLLNKVQHDIF--------- 322 Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML-EEDPTLTPRDIIVM 411 + + P D D SIT + C++ REVEVL++ L+ ++ ++ TL+PRDI+VM Sbjct: 323 --LNANEQRHPIFPEDVEDGSITINNCYTVAREVEVLYNYLVHLVDKKRETLSPRDIVVM 380 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 V DID Y+P+I+A+F +A Y I+D S + A ++L L + F +E+VL Sbjct: 381 VRDIDVYAPYIKAIFNNA--PYKFRYTIADESYADSDNLFNALHAILRLNEDNFKAEEVL 438 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 LLD + RF I + +R V+E+ IR+GI T +W++G+ R+ Sbjct: 439 QLLDSSYVRKRFGINN--VPLIRHVVDEANIRFGIHGAKE-----DETYLVSWKYGIKRI 491 Query: 532 LLGYAMESAQGE---WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 + G M Q + P D G + V L +ER + W+ Sbjct: 492 MYGICMSGDQEYGKGEEGFFPLDILEGSDSLEVIRFCHFAEVLISAIEDRKKERSISGWV 551 Query: 589 PVCRDMLNAF-FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 +L+ + P+ E + + QQ L D V + Q L Sbjct: 552 EYIEGILHNMVYEPEEEIDEDYNTLMQQLSDY--NLLNEYMSDTVAFDVFSHSFLQTLTG 609 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + F+ G + C+L+PMRSIPF+VV +LG++ +PR+ P+GF+LM + +RGDR+ Sbjct: 610 TTRTGLFVNGGITFCSLIPMRSIPFRVVAMLGLDYDKFPRREQPIGFNLMEKNKQRGDRN 669 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 +D+D++LFLE ++SA+Q LYISY+G+S +DNS PS LV EL+DYI Sbjct: 670 VKDNDKHLFLETVLSARQYLYISYVGQSAKDNSRMPPSALVDELLDYIESGC-------- 721 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT 827 E V+ L F + Q ER Y+ + + ++ Sbjct: 722 ---EDAEGVRNRLVTRQPLQGFSRKYGQGDER-LYSYLNTAVPERIITRADKAMEQPSI- 776 Query: 828 LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNA 887 E + L+ L RF+ +P +A++ L + + E + +TE F L+ L ++ + +LL Sbjct: 777 --EEIDLDELVRFFKNPFKAYYNKVLGIYYNDEQVLLNETEIFHLDSLQKWSLKNELLQ- 833 Query: 888 LVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC--RQPGQSMEIDL 945 ++ + + R G LP + + E+Q + ++ AC QS++++L Sbjct: 834 -MDTNAIANMKIRLVKTGRLPLKNMAYVALQQIEAEVQPVREKFRACINGAEEQSVQVNL 892 Query: 946 ACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLR--KD 1003 G + G + V L++ S M+ ++ +L A+G K Sbjct: 893 DIEGTLLKGTINGVFDGKLVQVSWSKREDKYLMEAYIRYLAGRAAGVLDGMCFISGASKR 952 Query: 1004 GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDST 1063 + PLA ++AL L+ L++ +REG P+ D D S Sbjct: 953 EAFEAIPLAQQEALRRLTALVKIFREGFEKITPFYPD--------FDIKPADVAGLDFSK 1004 Query: 1064 LQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ---LTPETMEAIVEQSQRFLLPLFR 1118 K K L +G+ + D + R + ++ L+PL Sbjct: 1005 FSKKVDKALD--KGDDITI----DPYISREYENGFFKDETMLDTYKVICSHLLVPLAE 1056 >UniRef50_P96921 Exodeoxyribonuclease V gamma chain n=23 Tax=Mycobacterium RepID=EX5C_MYCTU Length = 1097 Score = 440 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 287/1176 (24%), Positives = 475/1176 (40%), Gaps = 137/1176 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLS--------QK 53 L ++ + R D+ A + + DPF E++LV + G+ +WL LS + Sbjct: 3 LHLHRAERTDL-LADGLGALLADPQPDPFAQELVLVAARGVERWLSQRLSLVLGCGPGRA 61 Query: 54 FGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRH 113 G+ A I F P S I ++ + + ++ ++++W L+ ++ L+ L Sbjct: 62 DGVCAGIAFRNPQSLIAEITGTL-----DDDPWSPEALAWPLLAVIDASLDEPWCRTLAS 116 Query: 114 YLTDDSDK--------RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQ 165 +L + + + ++ + A LF Y RP LA W G + L AWQ Sbjct: 117 HLGHFATTDAEAELRRGRRYSVARRLAGLFASYARQRPGLLAAWLDG-DLGELPGDLAWQ 175 Query: 166 APLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQ 225 PLW+ALV H + I L P LP+R+ + G + L +Q Sbjct: 176 PPLWRALVTTVGADPPHVRH-----DKTIARLRDG---PADLPARLSLFGHTRLACTDVQ 227 Query: 226 ALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQ 285 L AL H ++HL +P W + LL R++ S + Sbjct: 228 LLDALAVHHDLHLWLPHPSDELWRALAGFQGADGLLPRRQDTSRRAAQ------------ 275 Query: 286 LFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL 345 +PLL + G+ R+ L ++ E PD LL +Q+DI Sbjct: 276 -----------HPLLETLGRDVRELQRALPAARATDEF-LGATTKPDTLLGWLQADI--- 320 Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 + R L D S+ H CH P R+++VL + LL +LE+DPTL P Sbjct: 321 ----------AGNAPRPAGRSLSDADRSVQVHACHGPARQIDVLREVLLGLLEDDPTLQP 370 Query: 406 RDIIVMVADIDSYSPFIQAVFG------SAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 RDI+VM DID+Y+P I A FG L ++DR Q++P+L LL+ Sbjct: 371 RDIVVMCPDIDTYAPLIVAGFGLGEVAGDCHPAHRLRVRLADRALTQTNPLLSVAAELLT 430 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + ++R + +L L + A+F ++ L + WV ES IRWG D + R L Sbjct: 431 IAETRATASQLLNLAQAAPVRAKFGFADDDLDTITTWVRESNIRWGFDPTHRRRYGLDTV 490 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEW-QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 +TWRFGL R+L G AM W + LP D+ EL G LA + +L+ GL Sbjct: 491 VHNTWRFGLDRILTGVAMSEDSQAWLDTALPLDDVGSNRVELAGRLAEFVERLHHVVGGL 550 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 + RPL WL ++ +++++ ++A + L +R Sbjct: 551 SGARPLVAWLDALATGIDLLTA--CNDGWQRAQVQREFADVLARAGSRAA-PLLRLPDVR 607 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 L +L F G + +CT++PMRS+P +VVCL+G++DGV+PR P G D+++ Sbjct: 608 ALLDAQLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLSHPDGDDVLA 667 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 ++P G+R R +DR L L+A+ +A Q L I+Y G + R P+V + EL+D + Q Sbjct: 668 REPMTGERDIRSEDRQLLLDAIGAATQTLVITYTGADERTGQPRPPAVPLAELLDALDQ- 726 Query: 759 HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG---- 814 + A V+ + H PFD +N PG A+ A Sbjct: 727 ------------TTSAPVRERILVTHPLQPFDRKNVTPGALLGAKPFTFDPAALAAAQAA 774 Query: 815 -----KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 + LP V L L F+ PV+ FF+ L + + D+ P Sbjct: 775 AGKRCPPTAFISGRLPAPPAADVTLADLLDFFKDPVKGFFRA-LDYTLPWDVDTVEDSIP 833 Query: 870 FILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 ++ L+ + + +++L ++ + G LP G G + + LA Sbjct: 834 VQVDALAEWTVGERMLRDMLRGLHPDDAAHSEWRRGTLPPGRLGVRRAKEIRNRARDLAA 893 Query: 930 RVIACRQPG---QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV 986 +A R +++DL +G +++G + V + S L+ + W+ + Sbjct: 894 AALAHRDGHGQAHDVDVDL-GDGRRLSGTVTPVFGGRTVSVTYSKLAPKHVLPAWIGLVT 952 Query: 987 YCASG-GNGESRLFLRKDGEWRFPP----LAAEQALHYLSQLIEGYREGMSAPLLVLPES 1041 A G S L + + + + L +L+ Y G PL + ++ Sbjct: 953 LAAQEPGREWSALCIGRSKTRNHIARRLFVPPPDPVAVLRELVLLYDAGRREPLPLPLKT 1012 Query: 1042 GGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPE- 1100 AW + D Q+ + ++ N G+ D + R W P Sbjct: 1013 SCAWAQARRDGQDPYPP------------ARECWQTNRFRPGDDDAPAHVRAWGPRAPFE 1060 Query: 1101 --------------TMEAIVEQSQRFLLPLFRFNQS 1122 + + R LPL S Sbjct: 1061 VLLGKPRAGEEVAGEETRLGALAARLWLPLLAAEGS 1096 >UniRef50_Q8D2T9 RecC protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D2T9_WIGBR Length = 1083 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 281/1122 (25%), Positives = 564/1122 (50%), Gaps = 43/1122 (3%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M+ +Y SN++D+++ ++ I++ +++P + E+I+ S+ +++WL++ ++ I AN+ Sbjct: 1 MIYIYQSNQIDLIQKILSKILKNFPINNPMKKEIIITSSSNISEWLKLNITLNINILANV 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +F SFIW + + +P ++ + +SW + ++P++ + + L + Sbjct: 61 EFISLNSFIWKLVILTTKNVPFDNFAFRLMLSWYIAQIIPKINKNIKIKNVYKNL----N 116 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + ++F LS K ++L+++YL+++PDW+ + L ++Q +Q +W LV+ + Sbjct: 117 QFQIFYLSYKLSELYNKYLIFKPDWIDLLNFKKKSKKLEDSQYFQLIIWNLLVKKIKK-- 174 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 + + +++Y+ I+ +E + + R+FI GI +P +YL+ L+ L K I+IHL Sbjct: 175 EKDFCISSIYESCIQKIEKSNLIFEDIADRIFIFGIYYIPEIYLKILKTLSKKIDIHLFC 234 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 NPC YW DI + Y++ L EN + + + + LL Sbjct: 235 INPCCLYWFDIDNRFYISNL-------------------IENKIKNKKNFFRKKIKISLL 275 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 + WG LG Y+ LL++L + E F DNLLH IQ+DIL + + Sbjct: 276 SFWGCLGAKYLKLLNNLNENIENKIFYKPKKDNLLHTIQNDILYNKYYNIIISKKFNKFE 335 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 N R L+ D+SIT H C + E+ L++ ++ + +++ + +DI+VM ++I+ YS Sbjct: 336 KKNLRVLNSKDNSITIHTCKNKYEEINSLYNFIVKITKDNKKICFKDILVMASNIEDYSS 395 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 +I ++F + + + Y ISD + + ++ A ++L LP +F E + LL+ ++ Sbjct: 396 YINSIFNN--INYKINYFISDIKIYERFNIISAIFNILKLPKFKFSIEQIFYLLEFSSIS 453 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 +F + E+ ++ L+ V G++WGI + ++ +++W + + + Y Sbjct: 454 NKFKMKEDEIKMLKYLVINLGVQWGISNKRFKKCNANFEEKYSWNNIIKKTVSEYYTRIN 513 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + + ++ + L + + +LN W L+Q L EW V + ++ FF Sbjct: 514 NKVYFKYIYSNDLDEKKINSLIKLENFISKLNYWYDYLSQPHLLYEWNDVIKKIIKNFFD 573 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 PD + + L+++ W II +G+ +Y + + L + L +R +E ++ ++ Sbjct: 574 PDKKENYVLDLLKKNWNDIIFQGINTKYKKTIYIETLENILYKRFKKENFFKKNKFNSIH 633 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 C L + IP K++CLLG+NDG YPRQ FD + + K D++ R +D Y FL L Sbjct: 634 FCNLKLSKIIPSKIICLLGINDGTYPRQDINYNFDSIYKNLKNDDKNIRQEDLYSFLIIL 693 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 +S+++ LYIS+I I + ++ S+++ ELI+YI S Y+ ++ N E+ +K L Sbjct: 694 LSSKEHLYISFIKNYINEERSKYISIIINELIEYISVSFYIKNCKSYNFLENINNIKKIL 753 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 + F ++ + + + +++ + + + + F Sbjct: 754 FKKYNNFYF----FRKEKIEIFNKKYF---------LNNININSDKKIFSKISINEFFLF 800 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR 900 +++P++ + + +L++NF E D E + + Y+IN L L++ + Sbjct: 801 YSNPIKFWCKKKLKINFSKE-HLYKDNEFILKNKFNSYRINIILFEYLIKNKYLNKKDLL 859 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRV-IACRQPGQSMEIDLACNGVQITGWLPQV 959 G F EI E + ++ +L + + ++ ++ + I GWLP + Sbjct: 860 KNTIKYFFDGVFEEIIIEKKYYQIIKLINNINKHLLMKKETKKVFFKLDRTIIFGWLPNL 919 Query: 960 QPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHY 1019 Q GLLRW P LS+ G W+EHL+YC GG G+S +FL + W F + ++A H+ Sbjct: 920 QNSGLLRWNPKNLSLQDGFLFWIEHLIYCIIGGKGDS-IFLGIESYWHFKNINYKKAKHF 978 Query: 1020 LSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNM 1079 +L+ GY G+ P+ +L +SGGAW+ ++ + + ++ D+ T + AR+K + A++GN Sbjct: 979 FKKLLVGYELGIENPIFLLNKSGGAWINHSFNKEKNKLILDEKTKKNARSKLISAWQGNK 1038 Query: 1080 MVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 + G+ D + ++ LT + I+ +S+++ + +FN+ Sbjct: 1039 FINGDSQDFYISKVIPFLTENNINKIINESKKYFIFPLKFNK 1080 >UniRef50_C4GHY2 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GHY2_9NEIS Length = 1184 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 296/1213 (24%), Positives = 484/1213 (39%), Gaps = 128/1213 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +Y SNRL+ + ++ I + L++PF E I++QS GM +++ L+++ GIAAN+ Sbjct: 1 MLHLYQSNRLEDIAQMLARIQQVAPLENPFAAEEIVIQSQGMRRYISQYLARETGIAANL 60 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLP--QLLEREDFTLLRHYLTD- 117 F LPA W + +P+IP S F+ + M W+L+ L + + DF R L Sbjct: 61 RFSLPAGLAWRLMREAMPDIPALSPFSSEVMRWRLLALFQSDEFAQSPDFAAARQALAPY 120 Query: 118 -DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLG-----EAQAWQAPLWKA 171 + +QL+ + AD+FDQYLVYRPDW+ W G LV L + Q WQA LW+ Sbjct: 121 LHNGDYAAYQLAGQLADVFDQYLVYRPDWIETWAAGKLVPELAHSRSADTQIWQAQLWQH 180 Query: 172 LVEYTHQLGQPRW-----------------------HRANLYQRFIETLESATTCPPGLP 208 L + A L +++ L Sbjct: 181 LDDGKQGAPHRVQLWRTLMQSLARPNPRLPQRYFVFGIATLAPMYLQLLAQLAQHSQ--- 237 Query: 209 SRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHS 268 V I AL P + + +I Y G + + + Sbjct: 238 --VHIF---ALNPSQ-AYWGNIIEPAQILNQTQTADLSYQGHPLLASLGKQGRDFFNELA 291 Query: 269 FEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA--------SWGKLGRDYIYLLSDLESS 320 + + + + + + + + G L + + Sbjct: 292 EVEAQ---LDLDSYTSEPQSPSLLHSIQYHIQSQTLPETAHANGWLAA-HQDYVHSQPRF 347 Query: 321 QE------------------------LDAFVDVTPDNLLHNIQSDILE--LENRAVAGVN 354 Q + TP+ N D+ L A Sbjct: 348 QAAQQQLNQQYQTALAPYQGSLKTNAVSFGEAKTPNTPNTNETPDLFSGCLTPEQNAIRQ 407 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 I+ + + D SI H HSP RE+++L D+LL +L + P P DI ++ Sbjct: 408 IQLTHQQNLALAQLNADPSIQIHSAHSPLRELQILKDQLLVLLAQHPDWQPHDIAILTPH 467 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 I+ Y+P+I+A+FG + LPY++SD + P+L+A L+L DSRF ++ ++ALL Sbjct: 468 IEPYTPYIEAIFGKH-SPYPLPYSLSDTQIAHRQPLLDALAQTLALMDSRFEADKLIALL 526 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 D ++ A +T + L + + + IRWG D + Q+TW+ GL R++LG Sbjct: 527 DNELILATHRLTRDDLPLIHDTIAQLNIRWGSDAAQRSQHSSQPNAQYTWQQGLERLVLG 586 Query: 535 YAMES--AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 + + A W ++ P+ + A L A+L+ L + + +W Sbjct: 587 FMLPENPANPLWHNIAPHSSNPSHQAPLS-RFAALVATLIRHQNQWQTPATVPQWNERIH 645 Query: 593 DMLNAFFLPDAETE-AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 +++N P ++ + A +E E A Y + ++ L Q L + Sbjct: 646 NLMNDLITPQSDDDHQAHQQLEAALAQWQNEAQTAHYTQTINQTIAIQHLNQYLASQN-D 704 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 FL G + IC+++PMRS+PFKV+CLLG+NDG YPR +DL++Q P++GDR+RRDD Sbjct: 705 AGFLRGGITICSMVPMRSLPFKVLCLLGLNDGDYPRNTKAAPYDLIAQHPQKGDRARRDD 764 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 DRYLFLEA++SA++ LY+SYIG+ I+ + ER PS L+ ELID I +P Sbjct: 765 DRYLFLEAILSAREVLYLSYIGKDIRTDEERAPSTLIGELIDTIAALTQIPA-------- 816 Query: 772 SEARVKAHLTCLHTRMPFDPQNYQ------------PGERQSYAREWLPAASQAGKAHSE 819 ++ H H PF P+ Y RQ YA+ A Sbjct: 817 --NQLNQHWITQHPLQPFSPKYYTGSLKNHSSAAKLISTRQDYAQALNTPQPPAAPFLQN 874 Query: 820 FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 + +P T ++W +P R + + L + P +EPF ++ Q Sbjct: 875 YTPAHETQEQPEIPQATFLQYWRNPNRQWLKHTLGWQAPHTQAAHPSSEPFTIDNPR--Q 932 Query: 880 INQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC-RQPG 938 ++ A D L A LP G F + + Q L +I R P Sbjct: 933 LDTAYTQARQHNQDFAELATTLTAQSQLPTGEFNTLIAQEQAIAAAGLNSELIQSPRHPD 992 Query: 939 QSMEIDLACNGV-------QITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASG 991 Q+ + L + G + + L + ++L L HL+Y A+ Sbjct: 993 QTGSLKLPTGTLNYTLSHNHQHGQILYAHQFLPNHNTQATLQASDSIELLLRHLIYSAAA 1052 Query: 992 GN--GESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTC 1049 + +L PP+A E A L+Q + Y++G P+ P A + Sbjct: 1053 PQPTPQPTHYLSLHQSITLPPIAQETAQATLAQWLAAYQQGQQHPIPFFPRVTLAVARAY 1112 Query: 1050 YDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR--QLTPETMEAIVE 1107 Y + KA+ Y + D + ++ TP Sbjct: 1113 YTGK-------TPDWDKAQKAAHAVYHKGYTGFAQADYPETKLIYGRDDDTPINSPTFRH 1165 Query: 1108 QSQRFLLPLFRFN 1120 ++ PL Sbjct: 1166 LTENLFAPLADCL 1178 >UniRef50_D2U882 Probable exodeoxyribonuclease v, gamma chain protein n=1 Tax=Xanthomonas albilineans RepID=D2U882_XANAL Length = 1187 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 313/1157 (27%), Positives = 492/1157 (42%), Gaps = 100/1157 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPF-EPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 R+Y SN LD L AL+ + R + P PE++L+ M +WLQ TL+ G+AAN+ Sbjct: 60 FRLYPSNALDTLAALLAEELRRPLPEQPLLAPEVVLIPQVAMRRWLQSTLAATHGVAANL 119 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLP-QLLEREDFTLLRHYLTDDS 119 F P F+ R L + + S+ W+L L L L YL DD Sbjct: 120 QFLTPGEFVAHALERNLG--AADDDLDMTSLHWRLYAALRSDLGADPTLAPLAAYLADD- 176 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 D K + L+ + ++F++Y +R DWL +WE G + + QA LW+ + Sbjct: 177 DPLKPWTLAGELGNVFEKYQAWRRDWLLRWEAGADPDDV------QARLWRRIA------ 224 Query: 180 GQPRWHRANLYQRFIETLESAT-TCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 R +RA +++ P GLP R+F + + P L+ L + +H Sbjct: 225 -SGRAYRARRIGHYLDRYARPDGPLPQGLPPRLFAFAVLNISPDVLRVLATQARVGTLHF 283 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 P + YWGD+ AG + EQ NP Sbjct: 284 YLPTPTQGYWGDL-----------------------QTLWQRRRAGTAVDLFAEQIQENP 320 Query: 299 LLASWGKLGRDYIYLLSDLE---SSQELDAFVDVTP------------DNLLHNIQSDIL 343 LL +WG GRD++ L+ D E E+ + D D+LL +QSD+ Sbjct: 321 LLQAWGAAGRDFMALIGDYEVVHPLAEIAVYADPLESGQRPLADGGLGDSLLRRMQSDLF 380 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE---D 400 + +D D S+ H CH+ RE++VLHD+L A+L++ D Sbjct: 381 QRRAP----------RSPAALPTVDKHDPSLQVHACHTRLRELQVLHDQLRALLDDPRLD 430 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 P L PR+I V+ +ID Y P++ AVFGS D LPYA++D S P+ E F++LL L Sbjct: 431 PPLQPREIAVLSPNIDPYVPYLDAVFGSHGNDDALPYALADASPLASEPLAEVFLALLGL 490 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 P +RF ++L L+ +A + GL LR W++ +G RWG+D + R+ + PA Sbjct: 491 PIARFGLHEILDLIASAPIAEAAGLDTAGLDRLRGWLHAAGARWGLDAAHRRQHQAPADD 550 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 +TWRF L R+LLG+A + V P+ + G + L LL L+ + LA+ Sbjct: 551 AYTWRFALDRLLLGHASGAEDDI-DGVAPWPQLEGSALAALDTLLRLLRVLDRHQAALAE 609 Query: 581 ERPLEEWLPVCRDMLNAFFLP---DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 P +W +L+A + A+ + + A+Y AVP ++ Sbjct: 610 PMPPAQWRECLLALLDALLPQTPSAPRAQRALERLRTLIDQFARDAARAEYTAAVPAEVV 669 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD-- 695 R L + L G ++ ++PMR +PF+ +CLLGMNDG +PR+ G + Sbjct: 670 RAHFTAVLGESDTRAPLLTGGISFGRMVPMRLLPFRAICLLGMNDGDFPRRDPAAGLNRL 729 Query: 696 ---LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 L + + + GDRS R+DDR+LFL+ SAQ Y+SY+G +D S R PS LV EL+ Sbjct: 730 TAELGTARRRHGDRSTREDDRFLFLQLFASAQDVFYLSYLGADARDGSVREPSPLVGELL 789 Query: 753 DYIGQSHYLPGDEALNCDESE-ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 Q H P A DP+ + + A + L Sbjct: 790 ACAAQYHAEPAAATTLVVRHPLQPFAAAAFGAIGAEAADPRRFSYRRQWRPAVDSLIGQR 849 Query: 812 QAGKAHSEF--VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 Q LP ++ ++ L+RF P F + RL + D EP Sbjct: 850 QPLPPWIPETLPAMADDALPTSLSIDELRRFLLDPAEQFLRQRLGLRLPDPAQADSDLEP 909 Query: 870 FIL--EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 + GL +Y + QQ+ AL+ ++ + L+ R RA LP G G + ++++ Sbjct: 910 LVAPTRGLDKYGLQQQVFEALLREET-DGLYERLRARALLPSGPLGRHQLDQHLRQLRPY 968 Query: 928 AD---RVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 AD + + + +G ++ G L G+ R + LS ++ LE Sbjct: 969 ADAFGHWCGATPAPPAARLHVHIDGTELHGRLSDWYAAGVGRVKIGALSGRSAIRHGLEW 1028 Query: 985 LVYCASGGNGESRLFLRKDGEWRFPPLAAE-----QALHYLSQLIEGYREGMSAPLLVLP 1039 L+ A+G F + PL E QA L+ L+ YR+G PL +P Sbjct: 1029 LLLRAAGEGAPFVRFFEHEDGLGPHPLDPERLSSTQAQQALTDLLRLYRQGQQTPLAFVP 1088 Query: 1040 ESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTP 1099 S A+ + D + + + +A + +A + + G D + P Sbjct: 1089 YSSWAYYQAARGGDLDKAIKNAAAQWQAGFSWREADRPQLRLVCRGRDPF-------ADP 1141 Query: 1100 ETMEAIVEQSQRFLLPL 1116 + A SQ L Sbjct: 1142 QRFAAFASTSQHIFGLL 1158 >UniRef50_C6HV34 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HV34_9BACT Length = 1124 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 296/1168 (25%), Positives = 492/1168 (42%), Gaps = 103/1168 (8%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLD---DPFEPEMILVQSTGMAQWLQMTLSQKFGIAA 58 +R++ S+R+++L + + DP P ++ Q+ +WL L+++ GI+A Sbjct: 3 IRLFESHRMEILAEAFVATLASAAEEGDLDPLRPRTVIPQNPVTGRWLSFYLARRTGISA 62 Query: 59 NIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 ++D PL +I F R+ F+++++ +++ LLP LL F+ + H+ D+ Sbjct: 63 SLDLPLAGRYIRGFFDRLHGPASGTLHFDRETLLLRILALLPDLLPLPAFSPVAHFAGDE 122 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL--VEGLGEAQAWQAPLWKALVEYT 176 + +L+ L++ ADL+D+ ++YRP+ L WE G + + W A LW+ L Sbjct: 123 PESLRLYDLAALLADLYDRSMIYRPELLLAWEEGLGGRDDDPVGPEGWPAVLWRLL---- 178 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKH--I 234 HRA + RF+ P LP + + G++ + P+ L+ + LG+ Sbjct: 179 -SGPDRPLHRARMMVRFLSG--EDPVPPEILPPALTLFGLTGMAPLDLRFFRTLGERHGC 235 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 + L F NP R YWGD+ + + Sbjct: 236 AVDLFFLNPSREYWGDVVRSRRREETPESLQ-------------------------PYLF 270 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 G PLL+SWG R L+++ + F P LL IQ DIL L +R + Sbjct: 271 RGTPLLSSWGGEFRTVHESLAEIPEAHR--LFFGTEPGGLLGQIQEDILTLFDRGEEVRS 328 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 + + D S+ RE+E+L DRLL + DPTLTP D++V+ D Sbjct: 329 GRIERKEIPR-----ADRSVEIVSATGRVREIEMLRDRLLELFAGDPTLTPEDVVVLAPD 383 Query: 415 IDSYSPFIQAVFG---------------------SAPADRYLPYAISDRRARQSHPVLEA 453 I Y+ +++VF S D +P+ ISDRR + P +A Sbjct: 384 ILPYAGIVRSVFSPGISPSGGRAGTNGGEGSAGSSEDGDPRIPFVISDRRETDASPAFQA 443 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 + LLSLP R ++ LL VP +A RFD+ + + +R+ + E G RWG D ++ E Sbjct: 444 LLLLLSLPGERVTVSHLVTLLAVPSIARRFDLGGQKIDRIREILAEGGFRWGRDIEDRSE 503 Query: 514 LELPATGQHTWRFGLTRMLLGYA-MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 + P+ H++ +GL R+LLGYA E V P + E+ G L+ L L+ Sbjct: 504 V-APSVDTHSFFWGLDRLLLGYACGPEEAPEGLPVPPVAVTEDPGGEIAGALSRFLWTLD 562 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 L P EW + +L FF P E + + ++ I A + + Sbjct: 563 RHLERLKDPHPAREWPGLLATILEIFFDPA-EGDPVLEILFALPGEIREGFSRASFDGEI 621 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 + +A+ + RFL G V+ ++P+RS+PF+VVCLLG+NDG +PR P Sbjct: 622 SSRWMGRHIARMAESREGRDRFLTGGVSFGRMVPLRSLPFRVVCLLGLNDGEFPRVHHPP 681 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 FD ++ +P+ GDRSRR+DDR LFLEAL+SA+Q L++SY+GR +D S + PSVL++E Sbjct: 682 SFDWLAARPRPGDRSRREDDRTLFLEALLSARQVLWLSYLGRESRDGSPKEPSVLLREFE 741 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN--YQPGERQSYAREWLPAA 810 D + + G E + L+ H DP+ + R+ Sbjct: 742 DVVAEGFTGEGGEEIQKQILLEAPVDPLSPSHYGDSPDPRLHSFSRSWREVLDASRNDGW 801 Query: 811 SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 + + P+P + L+ L+ F ++P R F RL + R + ++PD EPF Sbjct: 802 KAPVFWDRDLLLPMPEPGAAGILLDDLRFFHSNPARFFLLRRLGFSSRAREIDLPDDEPF 861 Query: 871 ILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR 930 L L +++ D L E + ++ Sbjct: 862 SLS-----------LREILKGLDQRSFEVDGIPWPPLGPLQLSEGIRHK-GDHVGRIGRL 909 Query: 931 VIACRQPGQSMEIDLACNGVQITGWLPQVQPDGL------LRWRPSLLSVAQGMQLWLEH 984 + +++EI L GV++ G L + + P + + + +LEH Sbjct: 910 LGLLSGEPEAVEISLELLGVRLVGRLSGILTKTEGGRVRVVDLWPGKIYPSHQVTAYLEH 969 Query: 985 LVYCASGGNGESRLFLR----KDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPE 1040 LV C L + F P A L +E ++ PL PE Sbjct: 970 LVACRGIPGYVGTLLCGVVPHNPEAFLFWPSPP--AEGGLESFVEAFQVAGERPLPFDPE 1027 Query: 1041 SGGAWLKTCYDA--QNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWY-----QRL 1093 A+++ + ++++ ++A + A G D +RL Sbjct: 1028 ISLAYIRKIRSKAAREVQEGEEETVGRQAAMRAWDAPAPPDRDEGLRDPRSLPTFWSRRL 1087 Query: 1094 WRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 + + R L PLFR Q Sbjct: 1088 FAGRPLPLEPDFPSWAHRLLDPLFREQQ 1115 >UniRef50_A1V2S0 Exodeoxyribonuclease V, gamma subunit n=90 Tax=cellular organisms RepID=A1V2S0_BURMS Length = 1354 Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 312/1177 (26%), Positives = 500/1177 (42%), Gaps = 122/1177 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVE-RERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML +++SNR + L + + P+ + ++V S + + L++ L+++ G+ AN Sbjct: 241 MLHLFYSNRHETLADALLDDLAFASDGAGPWAAQQVIVPSAALRRRLELDLAKRHGVCAN 300 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFT-LLRHYLTDD 118 + F A ++W VL +P S F + W+ LL Sbjct: 301 VRFSYLAQWLWAQIGEVLT-VPAHSPFAPDRLVWRCYRLLSDHGAAPWRASPRLAAYLAA 359 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGL-----------GEAQAWQAP 167 +D +L+ + A +FD YL YRP+WLAQW+ G + L + +AWQA Sbjct: 360 ADAPMRHELAHRIATVFDHYLTYRPEWLAQWQDGESIFALEGAPRHGGEAARDDEAWQAA 419 Query: 168 LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQAL 227 LW+AL+ G P HR R + + P V + + +PP+++ L Sbjct: 420 LWRALLAELSDSGMPPAHRFLREARAFD-PDVIARARAKWPDAVSVFALPTMPPLHIALL 478 Query: 228 QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF 287 + L + I++ + NPCR +W DI A L Sbjct: 479 RELSRWIDVRIYALNPCREFWFDIVTAARAESLD------------------------AA 514 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDL---ESSQELDAFVDVTPDNLLHNIQSDILE 344 + Q+VG+PLLA WG+ + +++L +L ++ + + D L +Q+ IL+ Sbjct: 515 DRLDYQEVGHPLLAEWGRQTQAQLHMLHELTESAAASDASRYADNPAPTWLARVQNAILD 574 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 L+ A G P + + HVCHS R++EVLHDRLLA + DP+L Sbjct: 575 LQPEAALG--------------EPPAERGVEVHVCHSLARQLEVLHDRLLAWFDADPSLA 620 Query: 405 PRDIIVMVADIDSYSPFIQAVFG--SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 P D++V + D+ + P I AVFG + +PY I+ Q++PV + L+LP+ Sbjct: 621 PSDVLVAMPDLATAGPLIDAVFGTPAGADAARIPYRITGLPPSQANPVARVLLDWLALPE 680 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG-Q 521 + +++ L +AAR+ I L ++ W+ SG R G+ D + Sbjct: 681 RDVGAPELVEWLRADAVAARYGIDATALETVQAWLAASGARRGLAPDAAEPPNPAVPAPR 740 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 HT+ LTR+ LGYAM + LP + G AEL+G LA L+ + R +A++ Sbjct: 741 HTFADALTRLFLGYAMPDGAAPVSTWLPIAGAEGGEAELLGRLARFTDDLDGFARRIARD 800 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + W V D L FF A++ + A++A G A+P +++R L Sbjct: 801 LTPQGWGDVFADALARFFDSGPAFADALSGVRDALDAMLAAMAEGAAGAALPAAVVRAGL 860 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 A LD G V +L +R +P+++VCL+GM+DGV P FDLM+ Sbjct: 861 AAALDD-PARGGVPWGGVTFSSLTSLRGLPYRIVCLIGMDDGVLPSLARADEFDLMAVFA 919 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 K GDR RRDD+R LFL+ L++A+++L I+Y GRSI+DN+ P+ LV EL+D++ + Sbjct: 920 KLGDRQRRDDERNLFLDLLLAARERLLIAYTGRSIRDNAPLPPAALVDELLDHLAAASAG 979 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP-GERQSYAREWLPAAS-----QAGK 815 P ++ + H PF + + P G +Y A + Sbjct: 980 PDAPP----DAVDAARRAFVIEHPLQPFSAEYFAPGGALFTYDASRATLARLLAEGARAQ 1035 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 A F PLP + V +RFW HP R+ + RL + +E+ DTEPF L+ Sbjct: 1036 ARPFFAAPLPAEPEQPVAFADFERFWRHPARSLLRARLGIVLLDAQAELVDTEPFELDYA 1095 Query: 876 SRYQINQQLLNALVEQDDAER---LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI 932 + +++L L+E DA R A+ ++P GA G + + + QLA V Sbjct: 1096 GSDALAERVLPLLIETADAAAFEHALRVADASPEVPGGATGAVRRDHALDALAQLAGNVR 1155 Query: 933 ACRQ-PGQSMEIDLAC--------------------------NGVQITGWLPQVQPDGLL 965 + +++ G L ++ G + Sbjct: 1156 RALADGATRVPFAFDVAPAWSAASDARWFGEHDAALAAAATREPLRLHGALARLTAAGQV 1215 Query: 966 RWRPSLLSVAQGMQLWLEHLVYCASG-GNGESRLFLRKDGEWRFPPLAAEQALHYLSQLI 1024 +R + + WL HLVYCA G L+ + F P+AA L L+ L Sbjct: 1216 IYRYARPGARDYLAAWLAHLVYCAIDPGGPRRTLWFGSGDTFEFAPVAAP--LEQLAPLA 1273 Query: 1025 EGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGE 1084 +R G PL P S A + + KA ++ N V GE Sbjct: 1274 ALFRAGRRMPLAFFPRSAWALVS--------------ESESKAAGVWI-----NDRVAGE 1314 Query: 1085 GDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 DD WR P E + PL + Sbjct: 1315 ADDASLALAWRGANPSLDEPFGALAHLVFDPLVEHLR 1351 >UniRef50_C6NU56 Exodeoxyribonuclease V gamma chain n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NU56_9GAMM Length = 1146 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 319/1163 (27%), Positives = 482/1163 (41%), Gaps = 106/1163 (9%) Query: 4 VYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFP 63 V H +RL+ L + + L P + LVQS + +WLQ L++ GI A I Sbjct: 11 VLHGDRLEDLLTAIRQWLGANPL-PPLVEDTFLVQSNAVGEWLQWQLAEGDGICAGIRVS 69 Query: 64 LPASFIWDMFVRVLP--EIPKESAFNKQSMSWKLMTLLPQLLER--EDFTLLRHYLT--D 117 LPA F+W+ + RVL +P ++ ++K ++ W+L+ LLP+L L YL D Sbjct: 70 LPARFLWESYRRVLGPRGVPDDTVWSKAALRWRLLRLLPRLAHEADPGGVPLLRYLATTD 129 Query: 118 DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGH--------LVEGLGEAQAWQAPLW 169 S + ++L+ ADL DQY VYR DWL W G ++ L + Q WQA LW Sbjct: 130 SSALERRWRLAGLLADLLDQYQVYRADWLKDWAAGRWTLRDGRGVLRDLPQDQRWQAQLW 189 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 L + G R +++ F++ L A LP R+ G +LP L+AL A Sbjct: 190 HWLCREVTEGGSHFAGRGEIHEAFLQRLREAAPGSLDLPPRLIFFGAVSLPAQSLEALAA 249 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 LG+H+++ + NP Y+W D+ + Sbjct: 250 LGRHLQVLMAIPNPSAYHWSDV---------------------AGADEDLRRQRRRRVLG 288 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESS---------QELDAFVDVTPDNLLHNIQS 340 E G LLA+WG+ GRD++ LL + S Q +D F + T LL +Q+ Sbjct: 289 TSEAGFGPRLLAAWGRQGRDFMRLLDRFDESVEMGPLWGLQRVDFFTEDTGTTLLRQLQT 348 Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 I +L + + R L D S+ H + P RE++VL D LL L Sbjct: 349 RIRDLVD------------SREPGRTLAENDDSLVLHSSYGPLRELQVLQDELLLRLGRG 396 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD--RYLPYAISDRRARQSHPVLEAFISLL 458 L PRDI+VMV DI SY+P +QAVFG + RY+P+ I D ++ ++ A + LL Sbjct: 397 RGLRPRDIVVMVPDIASYAPLVQAVFGVYGKNDPRYIPFHIVDLTPQERSNLIRALVWLL 456 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 LP R ++ LLD L RF + E L + W+ + G RWG+ + +L A Sbjct: 457 GLPQGRVTQSEIRDLLDCSALQRRFGLAPEDLPQIHAWLEQGGWRWGLSAAHRADLGFAA 516 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 G T + LL + + + E L A L+G L L +L WR+ L Sbjct: 517 CGAPTSGAFALQSLLLGYTNGSDSHFDGIEACAEVGSLDAALLGKLWVLWERLESWRQRL 576 Query: 579 AQERPLEEWLPVCRDMLNAFFLP-DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 + E W+ R +L FF+ D A+ +E + + + A + +PL + Sbjct: 577 KEATTPEHWVERARQLLADFFVASDTADREALEQLESALEDWLLQTEKAAWDGPLPLEIF 636 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 R+ L+ FL G V CTLMPMRSIPF++VCLLGMND YPR FDLM Sbjct: 637 REAWLDGLESA-GDGAFLGGGVTFCTLMPMRSIPFRMVCLLGMNDEDYPRPDPRRDFDLM 695 Query: 698 --SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 + GDRSRR+DDRYL LEAL+SA+ LY+S+ GR ++ R PS L+ +L I Sbjct: 696 TLPDMARPGDRSRREDDRYLMLEALLSARDGLYLSWTGRDPRNQENRAPSALILQLQREI 755 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 L PF P+ +P +S+AREW P ++ Sbjct: 756 VGIWGE-------------DALRTRLHLDPLQPFSPRYLEPDGPESFAREWFPVSTVED- 801 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 P + L L+ + + +F+ +RL V D D E F L+GL Sbjct: 802 --RSVAVLSPPAARLELALLDLKGALSDALASFYALRLGVESPWRDRMAADDEAFRLDGL 859 Query: 876 SRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI--- 932 ++QI QQL + G LP A G + + M+ L Sbjct: 860 GQWQILQQLWERAASPAELREGLAAEARRGHLPLAAAGILQQQRLLTLMESLLGSWQAVA 919 Query: 933 -ACRQPGQSMEIDLACNGVQITGWLP------------QVQPDGLLRWRPSLLSVAQGMQ 979 A + +E + +G ++ LP ++ W + + Sbjct: 920 EALGPEHEVLEDEFLGDGFRLQARLPKDRSWNANPLGIHLRRHTSKLWHGGKARADRLLL 979 Query: 980 LWLEHLVYCASGGN-GESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVL 1038 WLE V LFL +DG P A L++L+ E + P + Sbjct: 980 WWLELTVLQTKRREGAVLGLFLGQDGWLCAPA--PVAADESLAELLAWLGEALREPHPLS 1037 Query: 1039 PESGGAWLKTCYDAQNDAMLDDDSTLQK-ARTKFLQAYEGNMMVRGEGDDIWYQRLWRQL 1097 + A L + A + + + + WR Sbjct: 1038 LDWALALLADADRGDGAGSRRHILGDGRGAAGAWRENWLLQRHFP----NPEAVLEWRSS 1093 Query: 1098 TPETMEAIVEQSQRFLLPLFRFN 1120 + ++ ++R P R+ Sbjct: 1094 AGLSA---LDLARRIYEPYRRWL 1113 >UniRef50_Q3BM39 Exodeoxyribonuclease V, gamma chain n=19 Tax=Xanthomonadaceae RepID=Q3BM39_XANC5 Length = 1184 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 314/1162 (27%), Positives = 500/1162 (43%), Gaps = 105/1162 (9%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPF-EPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 R+Y SN LD L AL+ + R P +PE++L+ M +WLQ TL+ + G+AAN+ Sbjct: 56 FRLYPSNALDTLAALLAQELRRPMPGQPLLQPEVVLIPQVAMRRWLQSTLAAEHGVAANL 115 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLP-QLLEREDFTLLRHYLTDDS 119 +F P F+ R L + + + W+L L L L YL+D Sbjct: 116 EFLTPGEFVARALERNLG--AADDDLDMATTQWRLYAALQSDLGSDAALAPLAGYLSD-G 172 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 D K + L+ + A +F++Y +R DWL +WE G + QA LW+++ Sbjct: 173 DALKPWALAGELASVFEKYQAWRRDWLLRWEAGADPDDP------QARLWRSIA------ 220 Query: 180 GQPRWHRANLYQRFIETLESAT-TCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 R +RA ++++ A P GLP RVF I + P L+ L + +H Sbjct: 221 -TGRQYRARRIGQYLDRHARADGPLPQGLPPRVFAFAILNISPDVLRVLATQARVGTLHF 279 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 P + YWGD++ + + + Q NP Sbjct: 280 YLPTPTQGYWGDLQTLWQRRREDGAVQLFAE-----------------------QVQENP 316 Query: 299 LLASWGKLGRDYIYLLSDLE---SSQELDAFVDVTP------------DNLLHNIQSDIL 343 LL +WG GRD++ L+ D E E+ A+ D D+LL +QSD+ Sbjct: 317 LLQAWGAAGRDFMALVGDYEVVHPLAEIAAYADPLESGRRTLADGGLGDSLLRRMQSDLF 376 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE---D 400 A V D S+ H CH+ RE++VLHD+L A+L++ D Sbjct: 377 HRRAPAAEAVLPAVNLH----------DPSLQVHACHTRLRELQVLHDQLRALLDDARFD 426 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 P L PR+I V+ +ID Y P++ AVFGS D LPYA++D S + E F++LL L Sbjct: 427 PPLQPREIAVLSPNIDPYVPYLDAVFGSHGNDDALPYALADASPLASESLAEVFLTLLGL 486 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 P +RF ++L LL +A + E GL LR W++ +G RWG+D + R+ + P Sbjct: 487 PIARFGLHEILDLLASAPIAEAAGLDEAGLERLRSWLHAAGARWGLDAAHRRQHQAPGDD 546 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 +TWRF L R+LLG+A + + V P+ + G + L LL L + LA+ Sbjct: 547 AYTWRFALDRLLLGHASGADEDI-DGVAPWPQLEGSALAALDTLLRLLRVLERHQAALAE 605 Query: 581 ERPLEEWLPVCRDMLNAFFLPD---AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 EW +L A + A+ + + + A+Y VP ++ Sbjct: 606 AMTPVEWRERLLGLLEALIPTMPTAPRAQRALDRLRALIVQFARDAMRAEYAGKVPAEVV 665 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD-- 695 R A L + L G ++ ++PMR +PF+V+CLLGMNDG +PR+ G + Sbjct: 666 RAHFAAVLGESDTRAPLLTGGISFGRMVPMRLLPFRVICLLGMNDGDFPRRDPAAGLNRL 725 Query: 696 ---LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 L +++ + GDRS R+DDR+LFL+ SAQ Y+SY+G +D S R PSVLV EL+ Sbjct: 726 TAELGTERRRHGDRSTREDDRFLFLQLFASAQDVFYLSYLGADARDGSVREPSVLVSELL 785 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 Q H + A D R SY R+W PA Sbjct: 786 ASAAQYHAASNALDTLVVRHPLQPFAAAAFGALGDESD--AGADPRRFSYRRQWRPAVDS 843 Query: 813 AGKAHSEFVQPLPFTLPET-------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 + LP + ++ L+R P F + RL + E Sbjct: 844 LVGQRQPLAPWVAGALPAEGIALPASMSIDALRRLLTDPAGQFLRHRLGMRLPDPAGEDA 903 Query: 866 DTEPFIL--EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQE 923 D EP + GL +Y + QQ+ +A + D E L+ R RA LP G G + + + Sbjct: 904 DLEPLLAPTRGLDQYGLQQQIFDAALAG-DTEHLYARLRARALLPSGPLGRRQLDERVAQ 962 Query: 924 MQQLADRVIACRQPGQSM--EIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW 981 ++ AD R + + + + +++ G +P G+ R + LS ++ Sbjct: 963 LRPYADAFRQWRGESPAQSRRLQVQIDEIELHGRVPGWYASGVGRVQVGALSGRSAIRHG 1022 Query: 982 LEHLVYCASGGNGESRLFLRKDGEWRFPPLAAE-----QALHYLSQLIEGYREGMSAPLL 1036 LE L+ A+G + F D P+ A+ QA L++L++ YR+G+ PL Sbjct: 1023 LEWLLLRAAGEHAPYVRFFEHDDGLGPHPIDAQPLSQTQARTALAELLQLYRQGLQMPLA 1082 Query: 1037 VLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ 1096 P S + + D + + + ++ + +++ + + G D + Sbjct: 1083 FAPYSSWKYHQAARGGDLDKAIKEAAGQWQSGFGWSESHSPELRLVTRGRDPF------- 1135 Query: 1097 LTPETMEAIVEQSQRFLLPLFR 1118 + S R L + Sbjct: 1136 ADAQRFAEFAATSHRVYALLEQ 1157 >UniRef50_A2C8A0 Possible exodeoxyribonuclease V gamma chain n=4 Tax=Cyanobacteria RepID=A2C8A0_PROM3 Length = 1103 Score = 415 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 242/1161 (20%), Positives = 428/1161 (36%), Gaps = 101/1161 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +Y SNR + L ++ + F+ ++V + ++WL L+ GI+A + Sbjct: 1 MLTIYRSNRAEWLARVLAEQLRLAPPG-LFDSVDVVVNTWPTSRWLGEQLASVNGISALV 59 Query: 61 DFPLPASFIWDMFVRVLP-EIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 FP P S + + +L + E + + W L+ LLPQLLE E+ LR ++ Sbjct: 60 RFPFPGSRLRQLVRMILGIDSDAEDPWRASRLVWPLLDLLPQLLETEEAAPLREWVNRQP 119 Query: 120 DKRK-----LFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 + +QL+ AD FD Y +YRP + QW G + W+ L+ Sbjct: 120 SRPGHLNRVQWQLARSIADAFDDYALYRPKLIHQWLEGSDRLLNSSQEMPLTLRWQPLLL 179 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 R + L + LPS++ + G+S+L PV ++ +QAL + Sbjct: 180 RLLAERLNVEPFGIQVHRAVSKLRNGDHPAMALPSQLRLFGLSSLAPVQVELIQALSGLV 239 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 ++ + PC W + +DG Sbjct: 240 DVQMFLLTPCPDLWQRCRSRRETL-----------------------GNEWTEPADGFWL 276 Query: 295 VGNPLL-ASWGKLGRDYIYLLS-----DLESSQELDAFVDVTPDNLLHNIQSDILELENR 348 + P L A G++G ++ LL L QE D F P + + Sbjct: 277 LEAPRLEAILGRMGAEFQQLLEGGGESQLGQWQEGDLF--AAPATMACESGQE----PTL 330 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 DSS+ F C R+V+++ D++L DP+L PRD+ Sbjct: 331 LEQLQQQLVSPDDHQPLRRRQEDSSLQFLACPGQWRQVQLVRDQILQWFAADPSLEPRDV 390 Query: 409 IVMVADIDSYSPFIQAVFGSAPAD-RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 +VM ++ ++P + +VF A A LP+ ++DR + S + + + LL + R + Sbjct: 391 LVMTPQVNRFAPLLASVFNDAAATGVELPWRLTDRSQQDSPGLTQGMLQLLQIAGERLTA 450 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 + LL P + + +++ L + + +G RWG+D + H+ + Sbjct: 451 TALEGLLANPAIQQQQGFSQDDASSLSRCLQRTGFRWGLDAEER-----GGDETHSLIWC 505 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 L R LLG + S G + GL + LL Q + + + R W Sbjct: 506 LDRWLLGLVLPSTPGLAPGGAAPF-AEGLEPAQLAKWWQLLAQFSRQLKEFRRARTCGAW 564 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 + + + + F + + G + +++ D L + L Sbjct: 565 VELLQGFVEELFGDGGSWAWERQCLLIALEDWRQIGADCTL--LLEAAVVADVLNEALSA 622 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + G + + L PMR+IP +V+ L+G++ V+PR GF L+ Q+ + GD Sbjct: 623 DSGRFGHRTGALTVSALEPMRAIPHRVIVLMGLDADVFPRHRERAGFHLLEQQRQLGDPR 682 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 D DRY+ LEAL+S +Q L I++ R R + VQ+ + + + L Sbjct: 683 SSDQDRYVLLEALMSTRQHLLITWNSRDEHTGECRPAASPVQQWLGRLQHELSDETFQGL 742 Query: 768 NCDESEARVKAHLTCLHTRMP---FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 + + ++ P D ++++ P A S Sbjct: 743 CREPAANPLERSNFLSQGSQPPPSCDRRHFEARRWLDKTLAPPPLALALPLHWSSVSLEA 802 Query: 825 PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL 884 + + L R+ P + + QV R + D E L+ R+ + +Q Sbjct: 803 SAVISSEL----LLRWLIAPQLIWLEQ-FQVTPREWFDPVEDLEALDLDEWHRHGLLKQR 857 Query: 885 LNALVEQDDAER-----------LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA 933 L+ L+ + R+ G LP GA + E Q Q L +++ Sbjct: 858 LSELLGHLPTDENALLQGSEAGDWKHRYAGQGTLPPGAAATLECERLEQRWQHLQATLLS 917 Query: 934 CRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN 993 P + ++LA Q+ D ++ +P L M+ WL HL CA+ Sbjct: 918 M-GPCSTRRLELADGSRQM-----LWAGDTVVVVQPGQLKSRGVMEGWLSHLQVCANHTL 971 Query: 994 GESRLFLRKDG----------EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGG 1043 + + + + G R+ PL AEQA L L +G+S V P SG Sbjct: 972 TSATVVVARCGPAAKKDQFEIALRWQPLPAEQAREQLIALQALACQGLSQCWPVPPMSGW 1031 Query: 1044 AWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR----QLTP 1099 A+ ++ + F Q++ G V+GE + Q + Sbjct: 1032 AYANA-----------NNKLAGRGEEAFRQSWSGGFNVQGERERAEMQLCFGLNCEASEL 1080 Query: 1100 ETMEAIVEQSQRFLLPLFRFN 1120 + + PL Sbjct: 1081 LNSAGFEQANTSLYGPLVEAL 1101 >UniRef50_UPI0001C32181 exodeoxyribonuclease V, gamma subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32181 Length = 1143 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 304/1204 (25%), Positives = 475/1204 (39%), Gaps = 148/1204 (12%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG----- 55 ML V+H++ D L A + ++ L DPF E++ V + G+ +WL LS + G Sbjct: 1 MLHVHHADGADRLVAALAEVLTVR-LADPFAAEVVAVPTRGVERWLAQRLSGRLGTSPGA 59 Query: 56 ---IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLR 112 I AN+ FP P + + + + W L+ L+ + L Sbjct: 60 GDGICANVAFPTPRRVVEEAIAAASGLDAATDPWRPERALWPLLELVDAASDEAWLGRLT 119 Query: 113 HYLTDDS-DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVE----GLGEAQAWQAP 167 +L + D+ + A LF +Y ++RP L W G + L WQA Sbjct: 120 AHLDRAAGDRSRRLSAVRHVATLFARYALHRPAMLRAWAAGSDEDGAGGALDAEHRWQAE 179 Query: 168 LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQAL 227 LW+ L E G A L L LP R+ + G+++LP LQ L Sbjct: 180 LWRRLRERVGVPG-----PAELLDLGRARLVE-DPGLSDLPERISLFGLTSLPARDLQLL 233 Query: 228 QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF 287 +AL + ++HL P W I D A +LTR + Sbjct: 234 RALAERRDVHLFLLMPSPAAWRGIADAAGRGPILTRGQAL-------------------- 273 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDL--ESSQELDAFVDVTPDNLLHNIQSDILEL 345 +PLLASWG+ GR+ LL L E+ PD LL +Q+DI Sbjct: 274 ---SAALPAHPLLASWGRDGRELQLLLEPLPTEAVHADAIGAGDEPDTLLARVQADIR-- 328 Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 + R D L D+S+ HVCH R+VEVL D +L L +DP+L P Sbjct: 329 ---------ADRTPREDEPVQLGDGDASVQVHVCHGRARQVEVLRDAILHALADDPSLEP 379 Query: 406 RDIIVMVADIDSYSPFIQAVFG-------SAPAD----------RYLPYAISDRRARQSH 448 RD+IVM DI++++P ++A FG A AD L ++DR RQ++ Sbjct: 380 RDVIVMCPDIETFAPLVEATFGAGEADVGEALADDAVDLSGAHPAELRVRLADRSLRQTN 439 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 PVL LL L +R + ++L L+D + RF + E+ L + WV SGIRWG+D Sbjct: 440 PVLGVVTKLLELATARVTASELLDLVDREPVRRRFRLEEDELARVEDWVAASGIRWGLDA 499 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQG-EWQSVLPYDESSGLIAELVGHLASL 567 + L Q TW GL R+L G AM G VLP D+ +L G A L Sbjct: 500 AHRAPFRLQHVPQGTWAAGLDRLLTGVAMAERPGHTLAGVLPLDDVDSSAIDLAGRFAEL 559 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 L +L LA +P+ W + + ++Q ++ E Sbjct: 560 LDRLAAALDELAAPKPISAWATAIAEAADTMTATTPRDAWQRAELQQLLADVVEEATNDG 619 Query: 628 YGDAVPL--SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 AV L + + L RL F G + +CTL PMRS+P +V+CLLG++D V+ Sbjct: 620 VASAVSLDVADVAALLGGRLAGRPTRTNFRTGHLTVCTLQPMRSVPHRVICLLGLDDDVF 679 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 PR+ G D++ +P GDR R +DR + L+AL++A +L ++Y GRS + N+ER P+ Sbjct: 680 PRRSPRDGDDVLLDEPWIGDRDGRSEDRQILLDALMAAGDRLIVTYSGRSERTNAERAPA 739 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 V + EL+D I ++ R + + H PFD N+ P Sbjct: 740 VPIGELLDVIDRTACAAD---------GGRARDAVLVRHPLQPFDAANFAPSTLVPQRAW 790 Query: 806 WLPAASQAGKAH---------SEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN 856 + G +PL + + L+ L F HPVRAF + RL V Sbjct: 791 SFDGVTLEGARALGGERGSRPPFLPRPLQPQDADVIELDQLLAFVGHPVRAFLRQRLGVG 850 Query: 857 FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 E D+ P L+ L+R+ + +LL A D RA G +P GA G+ Sbjct: 851 VDVGAGERSDSLPIELDPLARWGLGARLLAARRAGVDVGVAVADERARGSVPPGALGDQV 910 Query: 917 WETQCQEMQQLADRVIA---CRQPGQSMEIDLAC-NGVQITGWLPQVQPDGLLRWRPSLL 972 E++ + P +++++ +A +G + G + V L S + Sbjct: 911 LRGVVAEVEAILGAAAETVGAGGPLRTLDVRIALEDGRTLAGTIGGVGQYVLPVVTYSRV 970 Query: 973 SVAQGMQLWLEHLVYCASGGNG---------------ESRLFLRKDGEWRFPPLAAEQAL 1017 + M+ W+ L A+ + R P + +A Sbjct: 971 DPRRRMESWVRLLALTAAFPERSLVATTVGRARRDVDRATTIARIAQPGGEPDVRRTRAH 1030 Query: 1018 HYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEG 1077 L+++++ Y GM PL + ++ + A + A+E Sbjct: 1031 AELARIVDLYDRGMREPLPLFRQTS---------------AAYAAGGATAVARAHTAWET 1075 Query: 1078 NMMVRGEGDDIWYQRLWR--------------------QLTPETMEAIVEQSQRFLLPLF 1117 + E D +Q ++ ++R L Sbjct: 1076 DFQPLREDLDPEHQLVFGGTLPFERLLAEAPRDDEQGEDWDMSEPSRFGRYARRLWSGLL 1135 Query: 1118 RFNQ 1121 + Sbjct: 1136 AHEE 1139 >UniRef50_Q3AJ30 Exodeoxyribonuclease V, gamma subunit n=5 Tax=Synechococcus RepID=Q3AJ30_SYNSC Length = 1081 Score = 405 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 258/1149 (22%), Positives = 424/1149 (36%), Gaps = 96/1149 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML VY SNR + L L+ + ++ P E ++V + ++WL L+ GI++ + Sbjct: 1 MLTVYRSNRAEFLARLLSRQLIEQQPG-PLETVEVMVNTWPTSRWLGEQLATANGISSLV 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKES-AFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 FP P S + + +VL +E + + W ++ LLP+LLE+ LR +L Sbjct: 60 RFPFPGSRLRQLVRQVLHLPAQEDDPWRAGQLVWAVLELLPELLEQPVAQPLRVWLAQRE 119 Query: 120 DKRK-----LFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 +QL+ AD D Y +YRPD L QW+ + WQ LW+ L + Sbjct: 120 GTASGLTRDRWQLARSIADAMDDYALYRPDQLEQWKQPRPDDD------WQPVLWRLLAQ 173 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 PR + +E L P LP R+ + GISAL PV + +QAL + Sbjct: 174 -----RLPRAPFGLQVREAVECLRRGDVDPALLPERLRLFGISALAPVQVDLIQALSGLL 228 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 + + PC W L DG Sbjct: 229 AVEIYLLTPCPDLWQRCGSRRASL-----------------------GDEWLIPPDGGWL 265 Query: 295 VGNPLL-ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 P L A G++G ++ LL +Q + L ++ + Sbjct: 266 AEAPRLEAVLGRMGAEFQQLLEGSGEAQLGERREGDLFAGSLQIAAAEERQPTLLDQLQQ 325 Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA 413 + + D S+ F P REV+++ DR+L L DP L PRD++VM Sbjct: 326 QLVDAESIAELNR-SSDDQSLLFQAAPGPWREVQLVRDRILQWLAADPDLEPRDVLVMTP 384 Query: 414 DIDSYSPFIQAVFGS-APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 I+ Y+P + +VF A LP+ ++DR + S + A +LL L +R + + Sbjct: 385 QIERYAPLLSSVFNDTAAFGVDLPWRLTDRSQQSSPGLSMAMFTLLELAATRLTATGLER 444 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 LL P L + +T E + Q + SG RWG+D H+ R+ L R L Sbjct: 445 LLANPALQGQQGLTPEEAVLITQTLQRSGFRWGLDARER-----GGDEVHSLRWCLDRWL 499 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 LG + G + + L + + +LL ++ L + RP W+ + + Sbjct: 500 LGLVLPVEPGLAPAGAAPFQQE-LDPDRLVRWWTLLDRVARMLDRLREPRPCHGWVELLQ 558 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 +L F + + ++ + L + L + Sbjct: 559 SLLQELFAEGGAWTDEAQSWAAALEEWRLRAHDCPLD--LDAAVALEVLQEALSVDSGRF 616 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 +G + I L PMR+IP KVV L+G++ +PR GF L+ Q+ + GD D D Sbjct: 617 GHRSGALTISALEPMRAIPHKVVILMGLDSADFPRPSRRPGFHLLEQQRRLGDPRSSDQD 676 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 RY+ LEAL+SA++ L IS+ GR + + P+ V++ + + + G + Sbjct: 677 RYVLLEALMSARRHLLISWCGRLERTGEPQPPAAPVEQWLSVLQEQLQRAGASTEGLLVT 736 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET- 831 A P Q R+ + G A + QP Sbjct: 737 PAANPLSRENFRPEAPLSCDRRQLEARRCLDAAPASVPNPQGLAWASLWQPEINDDEAEG 796 Query: 832 -------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL 884 + E L + P +A+ Q R + + D E LEGL RY + Sbjct: 797 RDGDDLALDPEALLAWLQQPQKAWLQAR-GLRPGEGIEAVEDLEALELEGLQRYLLLNHE 855 Query: 885 LNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEID 944 L A G LP GA + E Q Q L ++ + + + + Sbjct: 856 LEEQFILGSAPDWTASLAGQGVLPAGAGAALEQEELQQRWQALQRQLASLGPCRREVPV- 914 Query: 945 LACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFL---- 1000 LA + + D + +P +L+ A M+ WL+HL+ CA G + + Sbjct: 915 LAGLPMPL-----LYAGDTQVVVQPGMLTAAAVMRGWLQHLLLCAEGSAPAAGSAVVARS 969 Query: 1001 ----RKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDA 1056 + R+ L +A L QL R+G+ V P+SG + + Sbjct: 970 TRVAGAEVHVRWSVLPTVEAEDQLQQLARLARQGLERCWPVPPKSGWQMVAKERRKPGEG 1029 Query: 1057 MLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQ---LTPETMEA-IVEQSQRF 1112 F + ++ EG Q + +A + Q Sbjct: 1030 Q-----------QDFRKTWQD------EGATPLMQLCFGSDVAAEQLMDQAGFQQACQLL 1072 Query: 1113 LLPLFRFNQ 1121 PL + Sbjct: 1073 YGPLMANLR 1081 >UniRef50_A5GLW8 Exodeoxyribonuclease V gamma chain n=4 Tax=Synechococcus RepID=A5GLW8_SYNPW Length = 1105 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 254/1166 (21%), Positives = 432/1166 (37%), Gaps = 107/1166 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 MLR+Y SNR ++L L+ + PFE ++V + ++WL L+ GI+A + Sbjct: 1 MLRIYRSNRAELLAQLLAQELNLNPPG-PFEQVEVVVNTWPTSRWLGERLASFNGISALV 59 Query: 61 DFPLPASFIWDMFVRVL-PEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 FP P S + + VL E P E + + + W ++ +LPQL++ E+ LR + + Sbjct: 60 RFPFPGSRLRQLAQAVLSKEPPLEDPWRAERLVWTVIAVLPQLMQCEEAKPLRQWWNNQR 119 Query: 120 DK-----RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 R+ + L+ + AD D Y +YRP LA W G + L WQ L +AL E Sbjct: 120 TTSDALTREQWLLARQLADAVDDYALYRPQDLAGWLAGDDGDHLPAVLRWQPLLVRALAE 179 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 P Q+ ++ L S LP R+ + G+S L PV + LQAL + Sbjct: 180 -----RLPCEPFGLQVQQAVDQLRSGQAPATPLPKRLRLFGLSNLAPVQIDLLQALAAVM 234 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 ++ L PC W + DG Sbjct: 235 QVELYLLTPCPDLWERSAQRRRRL-----------------------GENWTASPDGTWL 271 Query: 295 VGNPLL-ASWGKLGRDYIYLLSD-----LESSQELDAFVDVTPDNLLHNIQSDILELENR 348 + P L A G++G ++ LL L S+ + D F D Q +LE R Sbjct: 272 IEAPKLEAILGRMGGEFQLLLEGSGDCLLSSTDQADLFADPVAMAASEGRQGSLLEQLQR 331 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 +A D S+ F C P REV+++ D++L + +D TL PRDI Sbjct: 332 QLASSEHFPLQH-------TSADRSLLFMGCAGPWREVQLVRDQILHWMADDSTLQPRDI 384 Query: 409 IVMVADIDSYSPFIQAVFGSAPAD-RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 +VM D++ Y+P + +V A LP+ ++DR + S + +AF++LL L R + Sbjct: 385 LVMTPDVERYAPLLASVLSDQDATGVDLPWRLTDRSQQNSPGLQQAFMTLLQLSAERLTA 444 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 + AL+ P + + + + SG RWG+D + H+ R+ Sbjct: 445 TGLEALMSNPAFLDLQGLEAQEAMDITAALQRSGFRWGLDREERH-----GDDTHSLRWC 499 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 L R L+G + G + L + + LL Q+ W L Q W Sbjct: 500 LDRWLIGLILPDEPGLALGSCAPA-VADLSLQQLERWWPLLDQIAQWIAQLRQSGSCTVW 558 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 + R +L+ F + + I+Q + + + + ++ L + L Sbjct: 559 VERLRRLLSDLFGDGGAWDWELQAIQQGLETWLIQAGHCELNLETT--VVIAVLEEALSA 616 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + +G + + L PMR+IP +V+ L+G++ +PR GF L+ ++ + GD S Sbjct: 617 DSGRFGHRSGAMTVSALEPMRAIPHRVIVLMGLDAASFPRTRERPGFHLLERQRRLGDPS 676 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 D DRY+ LEAL+S++Q L IS+ R + P VQ+ ++ + Q + Sbjct: 677 STDQDRYVLLEALLSSRQHLLISWSSRDERRGDALPPCPPVQQWLNLLRQELSEEAMAQV 736 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT 827 + + A RQ A A + + P Sbjct: 737 LIEPPANPLDAANFIPAKTHALSCDRRLLQARQCLDDPQGRAPGHAPLGLALPIHWPPEA 796 Query: 828 LPETVPLE--------TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 P L+R+ P RA+ + R + + D P L + Sbjct: 797 PPPPAHATTLNSDQVEQLERWLQAPQRAWLRER-GIEAGEWCDAVEDRAPLALPERTLRA 855 Query: 880 INQQLL-----------NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLA 928 + + L A + + R + G LP GA G + Q + L Sbjct: 856 LITERLRDELDRLKTHPEARWDVTRSGEWIRWSQGRGLLPPGAGGALDDIRLEQRWKNLQ 915 Query: 929 DRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYC 988 + + Q + ++ + + + S L ++ WL+HL+ Sbjct: 916 TTLFSLGSLQQPPRWE------RLATPPLPMAGETAVLISASKLQARSVLEGWLKHLLNQ 969 Query: 989 ASGGNGESRLFLRKDGE---------WRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLP 1039 +G + + R + R+ P+ ++QA LS L EG + P Sbjct: 970 RAGRAAPTVVICRGESSSKAETFSIAMRWLPMESQQADGLLSDLFALAEEGRRICWPIPP 1029 Query: 1040 ESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTP 1099 ESG A ++ A F + G + E + Q + Sbjct: 1030 ESGLARAVALAKGRDV-----------ADRAFSACWHGGIKRWAERERSDLQACFGNGCD 1078 Query: 1100 ----ETMEAIVEQSQRFLLPLFRFNQ 1121 + PL + Sbjct: 1079 AERLLSSPGFDSAFDSLYAPLLEARR 1104 >UniRef50_Q05XZ7 Possible exodeoxyribonuclease V gamma chain n=1 Tax=Synechococcus sp. RS9916 RepID=Q05XZ7_9SYNE Length = 1078 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 248/1146 (21%), Positives = 419/1146 (36%), Gaps = 97/1146 (8%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWL--QMTLSQKFGIAA 58 ML +Y SNR +VL ++ + E ++V + ++WL Q+ L+ GI A Sbjct: 1 MLTLYRSNRSEVLADVLAANLSLHPPG-VLEEAQVVVNTWPTSRWLGEQLALANPSGITA 59 Query: 59 NIDFPLPASFIWDMFVRVLPEIPK---ESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYL 115 N+ FP P S + +L + + Q++ W L+ LLP+LL+ L+H+L Sbjct: 60 NLRFPFPTSLLRHTVDGLLEQQSSGGGADPWRAQNLVWPLLELLPELLDHPASAPLQHWL 119 Query: 116 TDDSD------KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLW 169 L+QL+ AD D Y +YRP L W G + G + W Sbjct: 120 NTRKSAALEVLDPPLWQLARAIADAIDDYSLYRPAMLEAWLKGQATDARGTPLSPTML-W 178 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 + + ++ I L+ + + G+S+L PV ++ LQA Sbjct: 179 QQQLMQQLHSRLGCLPFGMRARQLIRRLQEGWRPERPPQPPLRLFGLSSLAPVQVELLQA 238 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L I L PC W S Q Sbjct: 239 LSCLRSIELYLLTPCPELWQR----------------------------QSSIESQAPLD 270 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLS-----DLESSQELDAFVDVTPDNLLHNIQSDILE 344 + + A +G+LG ++ LL L S + LD F + Sbjct: 271 EEWLLTVPSVEARFGRLGAEFQQLLEGSGETQLGSWRALDPFFFPATTASSQGKEP---- 326 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 + P D S+ FH C R+++VL D++L +L D +L Sbjct: 327 --TLLEQLQEHLVHGTPTDLLPRTEDDQSLQFHACPGRLRQLQVLRDQILQLLANDDSLE 384 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPAD-RYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 PRDI+VM +++++P + AVFG A LP+ ++DR + + + + LL+L Sbjct: 385 PRDILVMTPQVEAFAPLVSAVFGDNDATGVRLPWRLTDRSQQSEAGISQGVLQLLALGGE 444 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 R + + +L L + + + Q + ++G RWG+D + H+ Sbjct: 445 RLTASALETVLANAPLLRAHQLEPDEAEDITQSLQQAGFRWGLDSRDR-----GGDPTHS 499 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + + R++LG G G E G LL QL + L+ R Sbjct: 500 LAWAIDRLVLGVVYPETPGLALENTAPMALPG-SLEQQGRWLGLLRQLQRSLQWLSHSRS 558 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 ++ W+ R L A F + + I + + ++ + LA+ Sbjct: 559 VQAWVEGLRPQLMALFADGGDWAWELQTIHSVLTDWGEVAGNSSLE--LSAPVVGEVLAE 616 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 RL + +G + I L PMR+IP KV+ L+G++ G +PRQ GF LM Q+ Sbjct: 617 RLSEGSGRFGHRSGALTISALEPMRAIPHKVLVLMGLDAGAFPRQRQRPGFHLMEQQRLL 676 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 GD S D DRY+ LEAL+SA+Q L +S+ R + S V++ ID + Q Sbjct: 677 GDPSSGDQDRYVLLEALLSARQHLLVSWSCRDERTGEPLEASTPVRQWIDLLPQVPVREH 736 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 + P RQ + + + + P Sbjct: 737 AANALERSNFLPS-------EAWPPASCDQRLLQVRQHLDAGTIGGTAGLAFSITPHKSP 789 Query: 824 LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 LP + + L + P + + + L + R ++ + D E L+ R + +Q Sbjct: 790 DGPALPLS-AWDDLISWVTAPQKQWLEQ-LGLRPREHENAVLDLEDLSLDERQRSALLRQ 847 Query: 884 LLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEI 943 L E++ R G LP + G + Q L+ + + + + Sbjct: 848 ELGRDQEENAEPDWLALDRGRGQLPPHSAGALEAHQLEQRWTSLSTCLSSLGEERRDA-- 905 Query: 944 DLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKD 1003 ++ Q ++ D L+ + Q QLWLE L+ A+G S + + +D Sbjct: 906 -VSMGPWQ---AELSLRDDQLVLVHTARPRSPQRQQLWLELLLATAAGSKLRSAVLVGRD 961 Query: 1004 GEW-----RFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAML 1058 G R P +Q L Q + + PE+G A+ + Sbjct: 962 GHRFRVLERISPPTRDQCTALLDQHQAWREQYQQRCWPLPPETGWAFAVGEAKGKG---- 1017 Query: 1059 DDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR---QLTPETMEAIVEQSQRFLLP 1115 +K A+EGN ++ GE D Q + L + + P Sbjct: 1018 ---------WSKARDAWEGNAVLAGERLDAVQQLCFGSDLPLGDLLTDDAQALALTLHGP 1068 Query: 1116 LFRFNQ 1121 L Q Sbjct: 1069 LLERRQ 1074 >UniRef50_A3ETY6 Putative exodeoxyribonuclease V, gamma subunit n=2 Tax=Leptospirillum sp. Group II RepID=A3ETY6_9BACT Length = 1095 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 240/1163 (20%), Positives = 423/1163 (36%), Gaps = 120/1163 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML ++ SNR++ L + ++ + P+ P IL Q+ + +WL L+ G+A NI Sbjct: 1 MLVLHVSNRMERLTDQLFSVIRDDPP-PPWSPVTILPQNPTIGRWLTYRLADVQGVAMNI 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 PLP ++I D + F + ++ +L+ +LP L + F+ RHYL + Sbjct: 60 ATPLPGAWIRDFLETGFGRSGQVVHFERNALFLRLLRILPALRDDPVFSEFRHYLGEGDP 119 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 R+L LS + ++LFD+ ++YRP+WL WE E +W A LW+ + H Sbjct: 120 SRRLVSLSDELSELFDRAMLYRPEWLTSWE------DFPEDLSWPAVLWRNVAGKDH--- 170 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGK--HIEIHL 238 H A L F + LP R+F+ G+S + P L +G+ ++H Sbjct: 171 --PAHFARLLHEFHSLPVLDSLWQEALPDRLFLFGLSGIAPATLDIFFRIGRETSCQVHF 228 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 F NP YW D+ + + D G+P Sbjct: 229 FFLNPTDRYWADMVSLRSWEHMEEELK-------------------------PYFDPGHP 263 Query: 299 LLASWGKLGRDYIYLLSDLESSQE-----LDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 LLA G+ RD L + ++ + F + L +Q + ++ A Sbjct: 264 LLAFLGRTARDLHKKLEEGIRPEDPVADIRECFEEPEGTTTLSRLQRSLFRMDAAAEFLE 323 Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA 413 + P D S+ S REVE L D LL P L D++++ Sbjct: 324 RL-------------PDDGSLRIVSSPSVVREVETLRDFLLDRFLAQPDLRLEDVVILAP 370 Query: 414 DIDSYSPFIQAVFGSAPADRY----LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 + + Y+ I+AVF + + R + + + LL LP Sbjct: 371 ETELYAGTIRAVFEATGESGRAGEPVLSVTVSDRPPFEAALADVLVGLLRLPVFPLTLSF 430 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 V LL + RF + + L + + +G RWG+D + HT + ++ Sbjct: 431 VQRLLSFQTVLDRFSLDRKMASELLEALARAGFRWGVDKQDRTR---DEPEDHTLDWAVS 487 Query: 530 RMLLGYAME-SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 R+L GY QG V P+ E G L LL WR L+ L W Sbjct: 488 RILEGYCTGIEEQGLVFPVSPFVLPDDPQGEKAGILFRLLDLFRSWRDRLSGRHALSAWA 547 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 +L+ FF+ D + + + + Q + + + + D + ++ + L++R+ + Sbjct: 548 ESVSALLSDFFVLDPDRDRDLFALGQSLRELCRDIHDVEDMDCMMVT---EMLSRRIFRT 604 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 RF +G + ++P+RSIPF++VCLLGM + +PR FD + + P+ DRS Sbjct: 605 TWRDRFFSGGITFGRMVPLRSIPFRIVCLLGMGESAFPRNDVAQSFDFLRESPRPLDRSV 664 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 R+DD +LFLE L+SA+ L+ISY+G D + PS V++L++ + + Sbjct: 665 REDDLHLFLEILLSARSSLWISYVGGEGGDGTTGLPSPPVRQLLETLREPFPPEKKGQGL 724 Query: 769 CDESEARVKAH----LTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 E + + R + P Sbjct: 725 FREVPSDPFDPSCFSREAGSWGSFSSSRAGIVRSRSTRTDSSPSFFVPKKGRLVLPKGPE 784 Query: 825 PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL 884 + L LQ F+ +P + L + E + D EPF+L+ Sbjct: 785 DRGSGRRISLSRLQSFYRNPPFYQAKNVLNLAVAGERPLLLDEEPFLLDP---------- 834 Query: 885 LNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ--SME 942 + P G + +E ++ Q + Sbjct: 835 ----------SQEMADPAQNPWPPVGPLQREQQTRKRRERRERLLGGFEGLQEDHTETRR 884 Query: 943 IDLACNGVQITGWLPQVQPDGLL--RWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFL 1000 L G + G L + GL+ P L ++++L HL + + L Sbjct: 885 FSLGIGGSLLFGTLSLYRETGLIVQDPFPWALRPPDLLRVFLAHLAGSLAFSFYRGTVLL 944 Query: 1001 RKDGEWR---------FPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYD 1051 ++ E+A L + YR + +P A+ + Sbjct: 945 NLAKDFPRTDSTDRPVLWSSEPEEATRLLRPYLVLYRRFRTRTFPFVPAVSLAYALEQRN 1004 Query: 1052 AQNDAMLDDDSTLQKARTKFLQ------------AYEGNMMVRGEGDDIWYQRLWRQLTP 1099 + D + A+T + Q +++ + +Y L+ Sbjct: 1005 QRGRG-PDPRKAIAAAQTAWRQLDPWRTDHGQKNSWKSPFRKDPRRREGFYPHLFFDPEG 1063 Query: 1100 ETMEA--IVEQSQRFLLPLFRFN 1120 + ++ +Q+ P+ Sbjct: 1064 DWIKDPFFGLLAQKLWNPILDRL 1086 >UniRef50_D0L8X4 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L8X4_GORB4 Length = 1151 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 260/1192 (21%), Positives = 433/1192 (36%), Gaps = 115/1192 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLS--------Q 52 ML ++ + R D A + LDDP PE++ V + G+ +WLQ L+ + Sbjct: 1 MLHLHRAERTDT-LADALADLLATPLDDPMSPEIVAVPAAGVERWLQQHLATRIGCGTTR 59 Query: 53 KFGIAANIDFPLPASF----------------IWDMFVRVLPEIPKESAFNKQSMSWKLM 96 GIAANI+F PA+ + + + + W ++ Sbjct: 60 SDGIAANIEFLSPAALADAVTAALLTEAAGTDTANAGHEHSAGGGADDPWRPSVLVWSVL 119 Query: 97 TLLPQLLEREDFTLLRHYLTDDSDKR----KLFQLSSKAADLFDQYLVYRPDWLAQWETG 152 +L ++ + ++ ++ + + F + ADLF++Y RP LA W G Sbjct: 120 RVLDDRIDDPELAMIARHVGGGDETSPRIGRRFATARHLADLFERYGRARPTMLAAWAQG 179 Query: 153 HLVEG----LGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLP 208 +G +G +WQ W+AL R H A L + LP Sbjct: 180 RDEDGAGGHIGADLSWQPGFWRALRAEV-----GRPHPAEALGDLCARLRA-NPAVTDLP 233 Query: 209 SRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHS 268 R+ + G + + + L AL +H ++H+ +P W I Sbjct: 234 ERLSVFGPTRVTEEFRALLVALARHRDVHVFLPHPSPVLWEAISSSTV------------ 281 Query: 269 FEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVD 328 R E + +PLLAS RD L L+ ++D + Sbjct: 282 ------AGDRPEETHSPRRADRRLPAIAHPLLASL---SRDVQELELRLQPHADVDVHHE 332 Query: 329 VTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEV 388 + + G D ++ P DSS+ H CH P+R+VEV Sbjct: 333 SVLGHRPTLL-------------GALHAGLCADDLRQQAVPADSSVEIHACHGPERQVEV 379 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR---YLPYAISDRRAR 445 L DRLL + +DPTL PRD+++M D+++++P I+ FG A L ++DR R Sbjct: 380 LRDRLLHLFADDPTLQPRDVLIMCPDVETFAPLIRGAFGQAGLAHPAFALRVRLADRGVR 439 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 Q +P+L+ +++ L R + +V LL + + RFD+T++ L +R W+ S +RWG Sbjct: 440 QVNPILDVVGAVVELAAGRVSAGEVADLLGLEPVRTRFDLTDDDLDRVRDWLAGSNVRWG 499 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS-VLPYDESSGLIAELVGHL 564 I L GQ T+ GL R+LLG E GEW LP +L G Sbjct: 500 IGLGQRARFGLDGFGQGTFEAGLDRILLGVVAEEQDGEWLGTALPLAGVESTEIDLAGRF 559 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 A L +L+ L + P + W +++A + + E Sbjct: 560 AEFLARLSTTLEALTETGPRDRWRDALTGVVDALTATSPGDDWQRAQAIRLITDAFGESG 619 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 A+ + L+ +RD +A L F G + +CT++PMRS+P +V+ LLG++ V Sbjct: 620 PAEPT-VLRLADVRDLMAALLAGRPTRSNFRTGELTVCTMVPMRSVPHRVIVLLGIDGEV 678 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 +PR G DL+ P G+R+ RD+DR FL+A+ +A + L + Y G P Sbjct: 679 FPRVQRIDGDDLLGVDPLVGERNPRDEDRQCFLDAICAATETLLVFYSGADPVSGRRIPP 738 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD-----PQNYQPGER 799 +V+V EL D + A D + P ++ Sbjct: 739 AVVVSELADTLRTLIDPARSPAAAVDPVRHHTLHGFDQRNFLDGGVAGVAGPFSHDAELL 798 Query: 800 QSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRT 859 PA + A + L+ L F P+ + + RL Sbjct: 799 DGARAMRTPATTAVPMAARSVPVDDDPDEAGDIDLDLLIEFHTDPIAGYLRQRLGARIPR 858 Query: 860 EDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET 919 +S D L+ L + I ++ L ++ E G LP AFG + Sbjct: 859 AESAHDDQLDVDLDPLESWGIGERFLKRMLGGASIEECQAAELRRGTLPPFAFGTRTLAS 918 Query: 920 QCQEMQQLADR---VIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 Q L + +++ L +G ++ G +P V + S L Q Sbjct: 919 ISTVAQNLYRNVAVLRDGSPAMLDVDVTLP-DGRRLYGTVPNVFGQRFVTATYSRLKAKQ 977 Query: 977 GMQLWLEH-----------LVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIE 1025 + W+ V R G R + A L LI Sbjct: 978 QLTEWIRIVAVAAAADQGNPVAGRVDSGVVVGRAARGAGAARVTFGRPDDAARILHDLIR 1037 Query: 1026 GYREGMSAPLLVL----------------PESGGAWLKTCYDAQNDAMLDDDSTLQKART 1069 G+ PL + P+ G + + + A L L Sbjct: 1038 IRDAGLEQPLPLPAEAAAAFAQHDAGGRRPDWGLVNARRSFSGKFGAHLQPHVRLVFGGD 1097 Query: 1070 KFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 + +++ R +D + P ++ PL + + Sbjct: 1098 ALAEVTFEDILARKAVEDNVLAGIMAPADP-DDPLFCALARAIWSPLLQNGE 1148 >UniRef50_Q6FF17 Exonuclease V, gamma chain n=3 Tax=Acinetobacter RepID=Q6FF17_ACIAD Length = 1221 Score = 383 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 258/1242 (20%), Positives = 491/1242 (39%), Gaps = 147/1242 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVER--ERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 + V S R+DVL + V + + D + +V S + QWL LS+ GI AN Sbjct: 3 IHVIQSQRIDVLLQGVWQSVHQPTRQPFDVLATQHFIVPSPAVEQWLTEKLSELQGITAN 62 Query: 60 IDFPL-PASFIWDMFVRVL---PEIPKESAFNKQSMSWKLMTLLPQLL---------ERE 106 F F W + +VL + +++ + + W++ L + + Sbjct: 63 YLFHQRIRGFQWYAYQQVLSEHKDDVRKANIPRLILKWRVYQALYDFIQPDQILITQDHP 122 Query: 107 DFTLLRHYL-----------TDDSDKRKLFQLSSKAADLFDQYLVYRPD----------- 144 ++++ ++ L+ ++ + + LF Y++YR Sbjct: 123 AYSIIARIYDSADRLENGFEKQLKKQKMLYWVAEQVSQLFSNYMIYRGHCQKNCAGNCGC 182 Query: 145 ---WLAQWETGHLVE------------------GLGEAQAWQAPLWKALVEYTHQLGQPR 183 WL+ W ++ E +AWQ LW Y HQ Sbjct: 183 ASNWLSAWGENRELDIEQLIVQGNKEISAFQLQQAQELEAWQRWLWHR---YFHQDFLDI 239 Query: 184 WHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNP 243 + +L+ + +E ++ LP ++ + + LPP LQ L+ LG+++++ +L NP Sbjct: 240 QNIDDLFWQVLEQPQTRDIALKRLPKQIVMFTLLDLPPSQLQFLRRLGQYLDVLILHYNP 299 Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFE---DRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 + YW D DP + + R ++ E L + ++ +PLL Sbjct: 300 SQEYWADSVDPLWKQRYDVRVKQRFIEKNPAATDVDIAQFFEQFTLHFNAEARESRHPLL 359 Query: 301 ASWGKLGRDYIYLLSDLESSQE---LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 GK RD+ LL++L + +E +DAFVD PD LL +QSDIL L Sbjct: 360 TRLGKQARDHFSLLANLSTGEEGRWVDAFVDDFPDTLLGQVQSDILNLAEPQAG------ 413 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL---TPRDIIVMVAD 414 + L+P D SI FHVCHS R++EVL D+L+ L ++ P DI+V+V + Sbjct: 414 ------RYTLEPSDESIRFHVCHSSLRQLEVLRDQLIHWLSQNDDASVRRPNDILVVVPN 467 Query: 415 IDSYSPFIQAVFGSAPADRYL--PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 I P I++VF + P+D + P IS A + ++L R +D Sbjct: 468 IKEIEPLIRSVFPATPSDDGVFLPIKISGVVQLDVMNAWRAVLGRMTLLQGRLSYDDFAD 527 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE--LELPATGQHTWRFGLTR 530 L +P +D+ + ++ + + +G + G D ++++ +++++F L R Sbjct: 528 WLSLPATQVCYDLEDSQIKRMLALLAGAGFKRGFDIHHLQQSLSAEDHDDRYSFKFALDR 587 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL-----AQERPLE 585 + LG A+ +Q VL Y + EL+G L + ++ R + + +E Sbjct: 588 LALGIAIPEH-TLFQGVLSYSGVTPDDFELIGKLIQIYQDIDARRNWVLAHEQGTQHSVE 646 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL-------LR 638 +WL + + F I ++ + ++ DA L + Sbjct: 647 DWLKILMQDVIEFEQAGVVALKTAREIIKKQERMVTLASFYADKDAHTLRQIALPLPYIL 706 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL-M 697 DE+ + L+ + G + + +R +P+++V +L ++ G +P + + + FDL Sbjct: 707 DEIQRTLEHQSAQA-EPTGQITFSQIGQIRPLPYRLVVMLNLDTGRFPNRDSHIPFDLMD 765 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 + + + GDRSR +DD+ FL+A++ AQQ L++ Y G + D R PS ++QE D++ Sbjct: 766 ALRQQLGDRSRLEDDQGAFLDAVLLAQQALWLFYNGFDLNDGEVREPSSILQEFRDHLAL 825 Query: 758 SHYLPGDEALNCDESE--------------ARVKAHLTCLHTRMPFDPQNYQPGERQ-SY 802 A + D + L C+H PFDP + Y Sbjct: 826 IVAPAEQIAKHEDSNLTIQMQQQQFKLLDIPNQLWPLYCVHPLQPFDPLGFGNLPVAKRY 885 Query: 803 AREWLPAASQAGKAH---SEFVQPLPFTLPETVPLETLQRFWAH---PVRAFFQMRLQVN 856 +W A +A +V + + + + Q++ A P R + + L V Sbjct: 886 QDQWYQVAQSIQEASAILQPWVNMVYTQPQQELRVLDSQQWMADVTFPARLYLKN-LGVE 944 Query: 857 FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 + + EP L+GL RY I L + + L LP G Sbjct: 945 NLAMTTLLDQNEPLFLDGLGRYAIR-NFLQKQEQTTTPDTLLD------QLPVGKIKHSA 997 Query: 917 WETQCQEMQQLADRVIAC--RQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSV 974 W+ E ++L +R+ + + + + + +P+ + S Sbjct: 998 WQQSLAEQERLLERLHHYTTQPTATTHHVWRVSKTLHLNIIMPEHDVQDWVSLEASSARA 1057 Query: 975 AQGMQLWLEHLVYCAS-----GGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYRE 1029 + ++WLE+L++ + G R+ + D +++ QA YL+Q ++ ++ Sbjct: 1058 KRIAKVWLEYLLWLSYLNEGDAGQRRRRIVVFSDQTVICEGVSSIQARDYLTQWLKMWQV 1117 Query: 1030 GMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMV----RGEG 1085 + P+++ L+ D ++K L+ ++ + Sbjct: 1118 ASTQPVVLPAALILQPLEKAKQYHWVQQSDQFQLVEKDLLNILKEWQDPKAYMQIDTSQL 1177 Query: 1086 DDIWYQRLW------RQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 + Y W + T +A+ S P+F++ + Sbjct: 1178 ESSQYHLDWSFILQQQDATALLKDALQRYSYDLYAPIFQYLR 1219 >UniRef50_B2I2P5 Exonuclease V gamma subunit n=14 Tax=Acinetobacter RepID=B2I2P5_ACIBC Length = 1211 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 252/1235 (20%), Positives = 474/1235 (38%), Gaps = 141/1235 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFE---PEMILVQSTGMAQWLQMTLSQKFGIAA 58 + V S R+DVL + + P + + +V S + QWL L+++ G++A Sbjct: 3 IHVIQSQRIDVLLQGVLAS-TSQPSTHPLQVLKAQHFIVPSPAIEQWLIQKLAEQQGMSA 61 Query: 59 NIDFPLPAS-FIWDMFVRVL---PEIPKESAFNKQSMSWKLMTLLPQLLE---------R 105 N F F W + +VL E +++ + W++ L + ++ Sbjct: 62 NYQFHQRVRGFQWYAYQQVLTAHKEQVRKANIPRLIFKWRVHQALQEFIQPDVMSIDSSH 121 Query: 106 EDFTLLRHYL-----------TDDSDKRKLFQLSSKAADLFDQYLVYRPD---------- 144 ++++ ++ L+ ++ + ADLF Y+VYR Sbjct: 122 PLHSIVQRIYDSADRLEQGIEKQLKKQKMLYWVAEQVADLFSNYMVYRGQCQRGCENMCT 181 Query: 145 ----WLAQWETGHLVE------------------GLGEAQAWQAPLWKALVEYTHQLGQP 182 WLA W G ++ E + WQ LW+ + H+ Sbjct: 182 CPNNWLAAWGQGRSLDIEKYIAHKDKEVSAFTLQQTQELERWQRWLWQQ---HFHEDFMQ 238 Query: 183 RWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTN 242 L+ + +E E LP ++ I + LPP LQ L+ LG++I++ +L N Sbjct: 239 MQQIDELFWQELEHPERQKKALSRLPQQIVIFTLLDLPPSQLQFLRRLGQYIDVLILHYN 298 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFE---DRELPLFRDSENAGQLFNSDGEQDVGNPL 299 P + YW D DP + + + D N L + ++ +PL Sbjct: 299 PSQEYWADSVDPLWKQRYDLGVKERFIAKNPQATDAEIADFFNKFTLNFNAEARESRHPL 358 Query: 300 LASWGKLGRDYIYLLSDLESSQE---LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 L GK RD+ LLS+L + +E +DAFVD P++LL +QSDIL L + Sbjct: 359 LTRLGKQARDHFSLLSNLSTGEEGKWVDAFVDDFPESLLGKVQSDILHLVEPQAKQYELA 418 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE--DPTLTPRDIIVMVAD 414 D SI HVCHS R++EVL ++L+ L + + P DI+V+V + Sbjct: 419 PN------------DDSIQIHVCHSTLRQLEVLKEQLIGWLAKPHEQPRRPNDILVLVPN 466 Query: 415 IDSYSPFIQAVFGSAPADRYLP--YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 + P I++VF + ++ + I+ + + A I + L RF ++ Sbjct: 467 LAEVEPLIRSVFPATATEQGVHLPVKIAGIASLDALNAWRAVIGRIHLMQGRFSFDEFAD 526 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG--QHTWRFGLTR 530 L + R+ + + + + ++G + G+D ++++ +++++F L R Sbjct: 527 WLGLHATQQRYALEYAQVERILNLLADAGFKRGLDAEHLKRSLCDGDDDYRYSFKFALER 586 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL-----AQERPLE 585 + LG A+ + VL Y + EL+G L + LN R L + +E Sbjct: 587 LALGIAIPEHAT-FNQVLSYAKVQPGDFELIGTLIQIYQDLNERRDWLIMHEQKKSHTVE 645 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL-------LR 638 WL + F I ++ + ++ + L + Sbjct: 646 YWLQTLSQDIIEFEQAGVTALKTAREIVKKQERMLTLASYYAETETGTLRKITLPLPYIL 705 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL-M 697 DE+ + L+ + G + + +R +P++++ +L ++ G +P + + FDL Sbjct: 706 DEIQRTLENQTAQA-EPTGQITFAQIGQIRPLPYRLIVMLNLDAGQFPNRDTHVPFDLMD 764 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 + + + GDRSR +DD+ FL+AL+ AQ+ L++ Y G + D R PS ++QE +++ Sbjct: 765 ALRQQLGDRSRLEDDQGAFLDALLLAQENLWLFYNGFDVNDGEVRDPSSILQEFREHLAL 824 Query: 758 SHYLPGDEALNCDESEARVK---AHLTCLHTRMPFDPQNYQPGERQ-SYAREWLPAASQA 813 + + L LH PFDP+ + R Y W A Q Sbjct: 825 IVKPEPNAPDREVIEGIEIPTQLKQLYHLHYLQPFDPKGFMAENRYIRYQDHWFNVAMQI 884 Query: 814 GKAHSEFVQPLPFTLPET------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 +A + P + + P R + + L V S + Sbjct: 885 QQASGVLKPWANISYPLEIPDMLVLDSHQWIQDVTFPARLYLK-TLGVENLGNVSVLDQN 943 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 EP +L+GL RY I L E+ + LP G W+ E + L Sbjct: 944 EPLLLDGLGRYTIRHFLQQ-------NEQQAQPEVLLDQLPVGKVQYSAWQQGIFEQECL 996 Query: 928 ADRVIACRQP--GQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL 985 +R+ + + + + +P+ + + S + ++WLE+L Sbjct: 997 LERLHHYAPAVTQTTQRVWRIAKQLHMNITVPKSETQDWVSMEASSARAKRRAKVWLEYL 1056 Query: 986 VYCAS-----GGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSA------- 1033 ++ A G R+ + D +++EQA YL + +R Sbjct: 1057 LWLAYLNEGSAGTERRRIVVFSDQTVICKGISSEQARQYLQPWFKIWRYAQQQPLVLPAA 1116 Query: 1034 PLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQ--AYEGNMMVRGEGDDIW-- 1089 LL E A+ + + + D+ + + + + + M + E + Sbjct: 1117 LLLKPLEKAKAY-QWETTNPTEKIKLDEKSYAELLKYWNETGTFTSIDMTQNEACKLHQD 1175 Query: 1090 YQRLWRQLT--PETMEAIVEQSQRFLLPLFRFNQS 1122 ++ + ++ A E + P+F+F S Sbjct: 1176 WRFILQEQDAQALLQHACDEFAYDLYHPVFQFQHS 1210 >UniRef50_A6W6P1 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W6P1_KINRD Length = 1158 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 259/1217 (21%), Positives = 444/1217 (36%), Gaps = 167/1217 (13%) Query: 1 MLRVYHSNRLDVLEALMEFIVER-ERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG---- 55 ML V+ S + L + ++ DPF P+++ V + G +W+ LS G Sbjct: 1 MLHVHRSESANTLVTALAGLLRDPAPGADPFAPDVLAVGARGTERWIAQRLSHHLGAGDP 60 Query: 56 --------IAANIDFPLPASFIWDMFVRVLPEIP-----KESAFNKQSMSWKLMTLLPQL 102 I A +D PA + + L + S++W ++ +L ++ Sbjct: 61 AAGGGDDGICARVDTSSPAHLLDGVLAAALERTRPGTGDAVERWAPSSLTWDVLEVLDEI 120 Query: 103 LE---------REDFTLLRHYLTDDSDKRKLFQLSSKAA-------------DLFDQYLV 140 R +F LLRH+L LF +Y Sbjct: 121 APADGGPAPDGRPEFALLRHHLRHHPGDDGPGGPGGPGTPPVRRTAAAARVAGLFARYGA 180 Query: 141 YRPDWLAQWETGHLVEG---LGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETL 197 RP LA W G L WQ +++A+ E A L L Sbjct: 181 ARPQLLADWAAGRDDAPGAPLPADLRWQPEVFRAVRERVGLPA-----PAELLDDACAAL 235 Query: 198 ESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYL 257 + L R+ + ++ L L+ L AL +H E+HLL +P W Sbjct: 236 RT-DPALSDLGPRLAVFLVTRLATSRLRVLSALAEHREVHLLLQHPSPALWDATAAALRT 294 Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL 317 R +PLL S + R+ L+ Sbjct: 295 DPGPRR-----------------------AAWAAHAPGRHPLLRSMARDVRELQVRLAHA 331 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFH 377 P + + ++ DP D S+ H Sbjct: 332 APGHTDVHHPAPEP--------------APTLLGTLQAALARDAEPAPGPDPGDRSVQVH 377 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG-SAPADRYLP 436 CH R+VEVL + +L +L+ DPTL PRD++V D+++++P + A F + L Sbjct: 378 ACHGRARQVEVLREVVLGLLDADPTLQPRDVLVACPDVETFAPLVSAAFATDSHPGGGLR 437 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 ++DR A +++P+L + LL L SR + +VL L + RFD+ +E L LR+W Sbjct: 438 VQVADRSALRTNPLLGLAVRLLGLAQSRAGATEVLDLAAAAPVRRRFDLDDEDLEQLREW 497 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA-----------MESAQGEWQ 545 +G+ WG+ + +L + Q TWR GL R+L+G A G Sbjct: 498 TVAAGVHWGLSARHRGAWQLGSLDQGTWRAGLDRLLVGVAVGGAVEDDLVGRTGEDGLLG 557 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 +V+P + +L G A LL +L+ L + W D + E Sbjct: 558 AVVPLADVESSRIDLAGRFAELLDRLDAAVTRLQGRHGVAAWCDTLLDAVLDLADTAPED 617 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLM 665 + + ++ + + A V L+ + +++R F G + +CT Sbjct: 618 AWQVAQLRRELGVVAHDAARA-GTARVGLTDVAATISERFAAHPQRANFRTGALTVCTPA 676 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 P+R++P +VVCLLGM+DG +PR P D++++ P GDR R +DR + L+ + SA+ Sbjct: 677 PVRAVPHRVVCLLGMDDGAFPRAGGPDADDVLARDPHVGDRDPRGEDRQVLLDLVRSARD 736 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 L ++Y GR ++ + P+V V E++D + + + V+A + H Sbjct: 737 ALVVTYSGRDVRTGAVLPPAVPVGEVLDAL--------------EAAHPGVRARIEVHHP 782 Query: 786 RMPFDPQNYQPGERQSYAREWLP---------AASQAGKAHSEFVQPLPFTLPETVPLET 836 P D +N+ PG + + LP + L+T Sbjct: 783 LQPTDRRNFTPGALGTDGPFSHDGTAFSGADAGHREPAPVPPFLPAALPPAPAADLDLDT 842 Query: 837 LQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER 896 L +F HP R F + RL V T + E D P L+ L ++ + + L A + A Sbjct: 843 LVQFLQHPARGFLRQRLDVASATREEEPDDALPVQLDALQKWAVGDRALAARLRGVAAPE 902 Query: 897 LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC-RQPGQSMEIDLAC-----NGV 950 + R A G LP G G + +A P +S++++L + Sbjct: 903 VVRLEGARGGLPPGPLGVAVLREVGPVVDAIAGVAAEFDTAPPRSVDVELDLDVPGVGQL 962 Query: 951 QITGWLPQVQP---------DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGE-SRLFL 1000 ++TG + V+P + + S + Q ++ W+E L A+ E + + Sbjct: 963 RLTGNVRGVRPVRGGGRATGEVAVTTVYSRIKGKQTLRAWVELLALSAAHPGTEFRTVLV 1022 Query: 1001 RKD-----GEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQND 1055 + G P+ ++ A L L+E G+ PL + ++ AW + + + Sbjct: 1023 GRGDRGSTGLLTLGPVRSDAARDLLVDLLELRAVGLRFPLPLPVDTAAAWAQEAWRGRAP 1082 Query: 1056 AMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWR---------------QLTPE 1100 +A+ + E +W L P Sbjct: 1083 ---------DACLRAARRAWTSDFSFDKEDRQEENVTVWGAERPVEHLVRWEPPTTLPPG 1133 Query: 1101 TMEAIVEQSQRFLLPLF 1117 +R PL Sbjct: 1134 VPTTFEGLVRRVWEPLL 1150 >UniRef50_D0SSR5 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SSR5_ACILW Length = 1234 Score = 362 bits (929), Expect = 4e-98, Method: Composition-based stats. Identities = 269/1257 (21%), Positives = 479/1257 (38%), Gaps = 165/1257 (13%) Query: 2 LRVYHSNRLDVLEALMEFIVERER--LDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 + V S R+DVL M IV + + + +V S + WL +++K GI+AN Sbjct: 3 IHVIQSQRIDVLLDSMLRIVNQTARNPFEVLQTRHFIVPSPAVETWLTQKIAEKKGISAN 62 Query: 60 IDFPL-PASFIWDMFVRVLP-----EIPKESAFNKQSMSWKLMTLLPQLL---------E 104 F +F W + VL E +E+ + + W++ L + + + Sbjct: 63 TQFHHRIRAFQWTSYQWVLNAPKEVEQVREANIPRIIIKWRVFQALRKCILPEQIPLDVD 122 Query: 105 REDFTLLRHYL-----------TDDSDKRKLFQLSSKAADLFDQYLVYR----------- 142 +++++ + L+ ++ + + LF Y+ YR Sbjct: 123 HPLYSIVKRIYDSADRLEQGTEKQLKKQSMLYWVAEQVSRLFSHYMDYRGYCARNCPPNN 182 Query: 143 ----PDWLAQWETGHLVE------------------------GLGEAQAWQAPLWKALVE 174 +WL W ++ E +AWQ LW+ + + Sbjct: 183 CSCPSNWLEAWGQDIALDIEQMIYSPKDENGHEMQVADFVKIQARELEAWQRWLWQHVFQ 242 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 LY +E E+ LP+++ + + LPP L L+ L ++I Sbjct: 243 D---DYAKILEIERLYWDRLENAETRAQALKRLPAQIVVFSLLELPPSQLDFLRRLSQYI 299 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG-------QLF 287 +I++ NP + YW D DP + A+ ++ + E R +A QL Sbjct: 300 DIYIFHFNPSQEYWADSVDPDWKARFDLQREERFIQRFEKTRQRKPNDAEIKDFRIKQLN 359 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE---LDAFVDVTPDNLLHNIQSDILE 344 + +++ +PLL +GK RD+ LLS L S +E D FVD D LL IQSDIL Sbjct: 360 FNAEDRESRHPLLTRFGKQARDHFSLLSKLSSGEEGLWADVFVDEYQDRLLAKIQSDILY 419 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP--- 401 L ++ L P D S+ HVCHS R++EVL ++L+ L + Sbjct: 420 LLEP------------EQHQYALSPDDDSVQIHVCHSSLRQLEVLKEQLIHWLAQGNEEA 467 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADR------------YLPYAISDRRARQSHP 449 P DI+V+ + P I++VF P +R YLP I+ Sbjct: 468 PRQPSDILVLTPSLKELEPAIRSVFAPPPRERETGSKRLQKDNLYLPIQIAGVSRLDVSN 527 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 A + + RF ED L + R+ + + + Q + ++G + G+D Sbjct: 528 AWRAVLGRIQWVRRRFSIEDFADWLSLNATQQRYGLDYSQVERMLQLLTDAGFKRGLDQQ 587 Query: 510 NVRELELPATG--QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567 ++++ + +++F L R+ LG A+ +Q L Y + L+ L + Sbjct: 588 HLQQSLSAGDEDYRFSFKFALDRLALGLAIPEH-TLFQDTLSYAKVLTSDFPLISTLIRI 646 Query: 568 LMQLNIWRRGL-----AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L R L Q P++ WL R LN F E+ + I + ++ Sbjct: 647 YQDLVERRDWLTLHETGQRTPVKTWLEYLRADLNEFRDAGVESLKTVAEIIDKQMRMLTL 706 Query: 623 GLGAQYGDA----------VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 D +PL + +E+ L+ ++ Q G + + +R +P+ Sbjct: 707 ADYHDQDDPHASQELVALSLPLPYVLEEIQNTLE-MQLDQAEPTGQITFSQIGQIRPLPY 765 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLM-SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 K+V +L ++ G +P + + FDLM S KP+ GDRSR DD++ FL+AL+ AQ+ L++ Y Sbjct: 766 KLVVMLNLDSGKFPSRNQQVPFDLMRSLKPQLGDRSRLDDEQGAFLDALLLAQENLWLFY 825 Query: 732 IGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD------ESEARVKAHLTCLHT 785 G ++D R PS +QEL+ +I +A S A+ L +H Sbjct: 826 NGFDLEDGEARDPSTALQELVQHIALICQSEQPDAEIDPMVDIHGLSVAQHIRQLYHVHP 885 Query: 786 RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP-------ETVPLETLQ 838 PFDP + + Y +W A A + + P + + Sbjct: 886 LQPFDPAGFADMQTPRYQDQWFAVAEYIRSAEGKRSSWINAHYPALEQKEIRVLKGDEWI 945 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF 898 R P R F + V+ EP +L L +YQ+ LL E+ Sbjct: 946 RDMIFPARLFLKSV-GVSTIRYADLPSSREPLLLNKLEQYQVRDFLLQQ-------EQEI 997 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQ 958 LP G + W QE Q L +R++ + + ++ + Sbjct: 998 EPNLMLDRLPVGKTQQATWLGSQQEQQLLQERLLQLGKELTPVTQQSWQFSPELIIHINV 1057 Query: 959 VQPDGLLRW---RPSLLSVAQGMQLWLEHLVYCA-----SGGNGESRLFLRKDGEWRFPP 1010 Q W + S S + Q+WLE+L++ A + R+ + + +F Sbjct: 1058 PQVPNSSYWLSMQSSSASEKRRAQIWLEYLLWLAYLNDDARSPELERIVIFSNKTLKFSG 1117 Query: 1011 LAAEQALHYLSQLIEGYREGMSAPLLVLPES----GGAWLKTCYDAQNDAMLDDDSTLQK 1066 L++ +A YL ++ + G PL++ E W + + + + L K Sbjct: 1118 LSSSKAHEYLQLWLKAWEIGQQQPLVLPAELLMKKEWQWAENEHGK---MTIVEMPELLK 1174 Query: 1067 ARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETM--EAIVEQSQRFLLPLFRFNQ 1121 A ++ + +Q + + P+ + + P+ + + Sbjct: 1175 AWNNSYESAKPLASDESSLLHQDWQFILQDQDPDLALQNCCHDFAHGLYAPIHQHLE 1231 >UniRef50_A2BX92 Possible exodeoxyribonuclease V subunit C 125 kD polypeptide n=7 Tax=Prochlorococcus marinus RepID=A2BX92_PROM5 Length = 1060 Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats. Identities = 163/1150 (14%), Positives = 405/1150 (35%), Gaps = 119/1150 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML +Y+SN+++V+ L+ + E I V + + +WL ++ I+A Sbjct: 1 MLNIYNSNKIEVISQLLAKELIISPPL-ITEKLDIAVPNYFLGKWLWNEITVSNQISALY 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 + +++ + + PEI +N +S+ W ++ +L ++ +R+++ + Sbjct: 60 ELKTISNYTETLLTNLFPEI-DMGVWNFESIKWGIIDSFEELDSYKESLPIRNWINKFLN 118 Query: 121 KRKL-----FQLSSKAADLFDQYLVYRPDWLAQW-----ETGHLVEGLGEAQAWQAPLWK 170 +K+ + L+ K A+ F YL++RP+ ++ W + +L L + WQ L+K Sbjct: 119 NKKIIDGDIYNLTKKIANNFIDYLIFRPEMISNWHKYDLNSQNLFNNLNSNEYWQPILFK 178 Query: 171 ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL 230 L + + I+ ++ +P ++I + L +++ L Sbjct: 179 LLQKKMPEKPS-----CLYMIEVIKNIKKLQNYKNKIPKCIYIISDNNLSRLHVDFYSKL 233 Query: 231 GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 + +++L + W I + + NA Sbjct: 234 AEFTKVNLYLLSVGDNLWNRINS-----------IEGEVDFGGIENKLYLNNASIEG--- 279 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVD-VTPDNLLHNIQSDILELENRA 349 +GK G +Y L+ + + ++++ + D + + + + Sbjct: 280 -----------IFGKFGANYQKLIEETSNIEDINLNTKSIYIDPTI----NSSRKKDVPL 324 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 + + ++ D SI F + ++E + ++++ +LE + DI Sbjct: 325 INQIQKRLIDNKKYDFIINERDDSIIFRGHFNQLSQLEFVRNKIIEILETCEEIKYSDIA 384 Query: 410 VMVADIDSYSPFIQAVFGSAPAD-RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 ++ PF++ +F + + + LPY + S + +++ L + E Sbjct: 385 IVSPQTGLIKPFLKYIFNNELINGQKLPYFFIEGDYEDSSNIYNFLLNITQLAGEKITLE 444 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 + L F+ + + +N+ G WG+D + +++ + + Sbjct: 445 KIEYFLSQDFTQNIFNFDMKEKEEIILLLNQVGFHWGLDSNERL-----GEEKNSLEWCI 499 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 R++LG + + L + +L + L+ +L + L W+ Sbjct: 500 NRIILGLIYDKEFNFINNNLKSFSPKNISLDLNKWVKILI-KLKEYINLLRGSFSYSVWV 558 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 + +LN + + + + Q + L++ R+ L ++ Sbjct: 559 KKIKYILNDVNDFHQNFYLEICDLYRVMN---NYSISYQSDQIIVLNVFREILISCINNS 615 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 + + + + +R IP + L+ MN+ YPR +++++K GD S Sbjct: 616 KYKNESYINKILVSDIEKIRLIPRNTIFLINMNNVYYPRLTIKENINILNKKYSLGDPSV 675 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 D ++Y FLE LIS +++L +S++ +DN + S ++ELI+Y + +++ Sbjct: 676 FDREKYFFLELLISCRKQLIVSWVNND-KDNKKLDISYPIKELINYFESFLTIKQRKSI- 733 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 + + ++Q +++ + + Sbjct: 734 ----------------------IKYFDYDKQQ-FSKTEENTFTSHYTLIDKIDWEEKKFD 770 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 + L L ++ P + ++ + PD E + + Q+ L+ + Sbjct: 771 CKNFKLSELIYWFKTPQLYWLNKN-NISPKGIFIHHPDDE--YVTNFQKSQLVNNLIQKI 827 Query: 889 -------VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSM 941 +++ + +F G + + + LA + ++ Sbjct: 828 EIDNHNCIDELKNLNIREQFIENGIIAPKKSIFSKEKEIKDLVLSLATNLSQNNNIDRTY 887 Query: 942 EIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLR 1001 + N ++ ++ + ++ S L++ + + W++ L + + Sbjct: 888 ---IKSNSNKLEYFI---AGEVVIELIHSKLTLKRLSEAWIKLLFISSLDKKIAKTKVIF 941 Query: 1002 KDGEWRFPPL----AAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAM 1057 + + A L + I ++ L + PES +++ ++N+ Sbjct: 942 RKENLYKSEILQSPDPYYARKILEEYINIFKNFSEKCLPLPPESTYKYVEAKMQSKNEK- 1000 Query: 1058 LDDDSTLQKARTKFLQAYEGNM-MVRGEGDDIWYQRLWRQLTPETM----EAIVEQSQRF 1112 F + GN +GE D+ Q + + + S R Sbjct: 1001 -----------KAFSDRWIGNKSFTKGERDNTEIQLCFGNKKEPNFFFENDKFDDLSLRL 1049 Query: 1113 LLPLFRFNQS 1122 PLF ++ Sbjct: 1050 YAPLFEALRN 1059 >UniRef50_A5GU99 Exodeoxyribonuclease V gamma chain n=1 Tax=Synechococcus sp. RCC307 RepID=A5GU99_SYNR3 Length = 1071 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 253/1155 (21%), Positives = 431/1155 (37%), Gaps = 126/1155 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 MLR+ SN ++ L + ++R + +P P+ +L+ + M++WL + LS++ GI A I Sbjct: 1 MLRLISSNSIEDLATALASELDRHKPANPLTPQRVLISTNAMSRWLALALSERIGICAGI 60 Query: 61 DFPLPASFIWDMFVRVLPEIPK--ESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 +F + + + + +P ++ + W+L L+P L + E + L+ Sbjct: 61 EFDFAGRHLRQLILELDGRLPAGHRDPWDPSQLRWQLAQLIPALPQTELWEPLQQLWHQG 120 Query: 119 SDKR------KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVE----GLGEAQAWQAPL 168 ++ + QL + +D DQY +YRP + +W G V+ L Q WQ L Sbjct: 121 PQQQDNGLDTQRLQLILQLSDTLDQYGLYRPQMVRRWLNGESVDGSHAPLAAHQQWQPAL 180 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQAL- 227 + L + G P H A +E + L + G+S+LPP + L Sbjct: 181 LRELAQRLEPSGIP--HPAERLLHALEQSRQRSDPHEPL----HVFGLSSLPPALWKLLA 234 Query: 228 -QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 +A + + L +P WG + P E Sbjct: 235 QRASSRDSPVLLYQLSPSLDPWGSL-----------------------PPSHHEEGDALD 271 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL- 345 G+PLLAS G+ RD+ + L + + + P L + +L Sbjct: 272 RLERRLLHQGHPLLASLGRTQRDFHWQLELIAADLQEQFERQQRPAPLCPEEAGLLQQLK 331 Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 + V E + L ++ CH +R+VE H+ LL ++ DP++ P Sbjct: 332 ADLLVGRPRGEGLPGIEPPLKLQRNQLNLEVLACHGDRRQVEAAHEALLRLMAGDPSIEP 391 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPAD---RYLPYAISDRRARQSHPVLEAFISLLSLPD 462 R I+VM D+ ++P + AVF R+LP ++DR RQ +P ++ LL+L Sbjct: 392 RHILVMTPDVARFTPLVLAVFERPGRSSDPRHLPVRVTDRTLRQRNPRVDLVFRLLALAS 451 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 SR +DVL +L +P LA ++ R+ ++++GI WG D D+ + PA Sbjct: 452 SRLSRDDVLDVLLLPELAEHLELGGLTQPQWRELLDQAGICWGRDGDHRQSWGYPAGDAF 511 Query: 523 TWRFGLTRML------LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 +WR+GL R+L G+ + A L S A V L +L + Sbjct: 512 SWRWGLDRLLLGLELSDGFPEQEAASGEWGGLAACNQSLATANDVLALHDACSRLFEQLQ 571 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 L+ P E W + D + + + + G A+ + Sbjct: 572 ALSGPLPAERWNEQIGSAIQQLSGGD-DEGWQAPEVYELLTPLRD---PEASGLALDRAA 627 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + L + Q++ ++G V++ L PMRSIP +VV LLGM++ PR+ G+DL Sbjct: 628 VVRLLEEAEAQQQGRYGHVSGAVSLSALEPMRSIPHRVVVLLGMDEQRLPRRDQRPGYDL 687 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 M Q+P RGDR RR +DR + LEAL + +Y + ER P+ + +L+ + Sbjct: 688 MLQRPWRGDRDRRQEDRAILLEALQACSDHWIATYNAIDPRSGEERNPAAPLSDLLRCLE 747 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 +S+ E + Q A + A Sbjct: 748 RSYRTEAGEPITT---------------------------WVLQQQPPLPPLTAREVVGA 780 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS 876 Q P E LE LQ++ P RA Q ++ E D E +GL Sbjct: 781 PWPMDQRWPVDECEPASLEELQQWLRDPARALLQAH-GIHPHRRGDESSDPEESAPDGLQ 839 Query: 877 RYQINQQLLN---ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA 933 R+ + Q+LLN +E + + G LP G + + Q L + Sbjct: 840 RWTLGQRLLNLGSERLEANQWPQQRDALARRGHLPPGPAAIVSSDQPWQRCHALLAKQAE 899 Query: 934 CRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN 993 + + ++ S + + WLEHL A+ Sbjct: 900 LQDA----------------------DGEAVVLMSNSRFKPKRLLDGWLEHL--WANAER 935 Query: 994 GESRLFLR--------KDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAW 1045 + L L + W P + A+QA ++ + E + P+ +PE Sbjct: 936 PQQTLLLGPMEQKGEERAAVWTLPAVEAQQAKAWIDDWQQWREEALQRPIAWIPELNWQL 995 Query: 1046 LKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAI 1105 L D + + + + G+ Sbjct: 996 LSQQQDGSLPGLSAQQLKELNPPGRNDYEWPSAWLQLLGGEAPSIASWLEHPEA------ 1049 Query: 1106 VEQSQRFLLPLFRFN 1120 + S R+LLPL Sbjct: 1050 EQLSLRWLLPLSEAL 1064 >UniRef50_D1R7X4 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7X4_9CHLA Length = 1144 Score = 339 bits (868), Expect = 4e-91, Method: Composition-based stats. Identities = 239/1202 (19%), Positives = 448/1202 (37%), Gaps = 156/1202 (12%) Query: 3 RVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDF 62 V+ SN++++L ++ + PF +I+V S M W+ ++++ GIA + Sbjct: 8 HVFFSNQVELLIHPLKQQLLG---AHPFCRRLIIVPSPAMKSWVMFKMAEESGIAMGFET 64 Query: 63 PLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLL---------EREDFTLLRH 113 I ++ + P + + ++ L + Q+L E E + L Sbjct: 65 IYLDQGIQRLYQLIEPNQTLANHPSSFELTLALEVEVRQILMRCESLSSEEHELWKPLFG 124 Query: 114 YLT--------DDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQ 165 YL +++L L K A LF +Y + + L W +WQ Sbjct: 125 YLRFSPSIKTLSLKGEKRLISLVEKLAGLFLEYGIAGGEALEAWRQ-------APPSSWQ 177 Query: 166 APLWKALVE----YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPP 221 LWK + E Y ++ ++ ++ I+ L+ V + +S LP Sbjct: 178 VYLWKKIFERGNAYNWTYPYHYLNQISIPEKRIDQLQ------------VHLFAMSYLPA 225 Query: 222 VYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSE 281 +Y LQ + + I + +PC +W D ++ ++ + + Sbjct: 226 LYHNFLQKIAQAISVSFYLLSPCEAFWSDACSDKESKRMQRYWKKQDAPEAQQVAL---- 281 Query: 282 NAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL-----------ESSQELDAFVD-V 329 + NPLLA++G+LGR+ + D + + + + + Sbjct: 282 --------EELLRDKNPLLANFGRLGREMAVAVEDSNVRTSACYTLPARALDFPCYEESI 333 Query: 330 TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVL 389 T D LLH+ L L + + L DS+I H S REV++L Sbjct: 334 TSDILLHSSDRPYLTLLQAVQTDMVLFRNPDHTPPLDLSENDSTIQIHATPSLLREVQIL 393 Query: 390 HDRLLAMLE---EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 HD L+ ++ ++ L+P + +VM DI Y+PFI+ VF + + L Y + D + Sbjct: 394 HDNLIRLIHNAPKENPLSPNEWVVMAPDIRIYAPFIKMVFSN--PNSPLDYKMMDAELPE 451 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 + +++F+ LL L SR+ + +L L D ++ + E + +R W+ E+GIRWG+ Sbjct: 452 QNLYIQSFLHLLKLSSSRWDTVSLLTLFDYLPFRNKWGLHFEDIDQIRTWIKETGIRWGM 511 Query: 507 DDDNVRELELPATGQHTWRFG--LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 D + + + HT G+ M + + L+G Sbjct: 512 DIAHRQMILKQDHCAHTLVDENPAGTWEHGFQMLLKGLILEENDTILSVDITQSTLLGKW 571 Query: 565 ASLLMQLNIWRRGLAQ--ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 ++ L+ L ER ++EW + + N + LP+ + + Sbjct: 572 IYIVRSLHQDLIPLNDGSERTIQEWGTYLQHLSNFYLLPELSEHQELLEHL-----LHPF 626 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMN 681 G ++ L +E +S R + V C+++PMR+IP K + LLG+ Sbjct: 627 FKGFLPQHTFSFKTIQPILLSLFKKEDVSYRETSLRAVKFCSMLPMRAIPAKGIALLGLE 686 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGD-RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 +G +PR L L++ P+ S+ D DRYLFLE L SA++ L +SY S Sbjct: 687 EGAFPRFLPESSLHLLAFHPQADYSPSQIDFDRYLFLETLTSAREYLLLSYQAFSST-GK 745 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 E+ PS+LVQEL+ Y+ +S+ L H ++PQ + Sbjct: 746 EQPPSLLVQELMSYLDKSYRLGDTCPS----------KRCFFKHPFHGYNPQYFDNSSLN 795 Query: 801 SYAREWLPAASQAGKAHS-----------EFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 S+++E +A + K PL + + L +P +F Sbjct: 796 SFSQENYRSALASLKTEKTSKHCFIPKFLSLRTPLCLEEEHILEIRQLIALARNPFEHYF 855 Query: 850 QMRLQVN-FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLP 908 RL + + E +IPD + F L LS+ + ++ L + + L + G LP Sbjct: 856 NKRLGIYLEKEESRKIPDDDLFSLTSLSKASLKKEAL-----KHPLDALLTQNEIKGRLP 910 Query: 909 YGAFGEIFWETQCQEMQQ----------LADRVIACR------QPGQSMEIDLACNGVQI 952 +G F + + +E++Q D++ +P Q +++ Sbjct: 911 FGYFKALSLDQLKKEIEQNKSLLLNCGIALDQIFQIELTDAVSEPTQIHPACWLLPPLEL 970 Query: 953 TGWLPQV--------QPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGE----SRLFL 1000 T + + + + ++ W +L+ L Sbjct: 971 TYQVDKRIKIVGILPEVTPQGLLAFIRDEKKEVIKAWPAYLILNCLANVYPDMFGKHLIF 1030 Query: 1001 RKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDD 1060 K G + P +Q L ++ Y + +LPE W+ + L Sbjct: 1031 AKSGSIKAPFF--DQPFTLLEHFLDYYFICQTHVSPLLPE----WIPDMIENPKSCQLKI 1084 Query: 1061 DSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFN 1120 +L + + N M RG+ D + + E + + P++ Sbjct: 1085 QKSLTGHFSLYND--YVNWMTRGDVDLDYVSLV---------SEWQELATAYFSPIYTHW 1133 Query: 1121 QS 1122 + Sbjct: 1134 YA 1135 >UniRef50_B6FV68 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FV68_9CLOT Length = 1134 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 126/1047 (12%), Positives = 272/1047 (25%), Gaps = 167/1047 (15%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQ-MTLSQKFGIAANIDFPLP 65 S + L V + L+ P ++LV Q + + ++ N+D Sbjct: 12 SGKSHYL----YEKVTKASLEHPETNYIVLVPEQFTMQTQKDLVMASPRKGIMNVDVLSF 67 Query: 66 ASFIWDMFVRVLPEIPK-ESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 +F K K + K+ D L + K Sbjct: 68 GRLAHRIFEETGGNQRKVLDDVGKSFVLRKI---------AGDCEAELRVLGSNLKKTGY 118 Query: 125 FQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRW 184 F QY + E L ++ EY + Sbjct: 119 IGEVKSVISEFTQYDIQEETLEQMIEEVKDSSNLYYKLQDIKTIYHGFREYLREKYITG- 177 Query: 185 HRANLYQRFIETLESATTCPPGLPSRVFI-CGISALPPVYLQALQALGKHIEIHLLFTNP 243 + ++ L + L V + G + PV + L+ L + ++ Sbjct: 178 ------EELLDVLCTVVGESKILKDSVVVLDGFTGFTPVQNKLLRELFGVCKRVVITVTM 231 Query: 244 CR-YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS 302 + K P L L + + E Sbjct: 232 EQKENPFSYKHPYQLFALSKQMVTSLITIAKETKTDVEEPIYLY---------------- 275 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 + + F + T A +E Sbjct: 276 -----------------DRPIYRFRENT--------------------ALAFLEAHLFRY 298 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 +K + I + +P+ EV+ ++ + R+I ++ +D+++Y I Sbjct: 299 SKEQYEKEQDCIQVYCAKNPKEEVDFAAQKIRNL-ARTRGYRYREIAIIASDLNTYGNQI 357 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 + +FG +P + +R+ + +E SLL++ + F E V L + Sbjct: 358 EKIFGEY----QIPIFMDHKRSILLNSFVEYVRSLLAMVEQNFSYESVFRYLRTGLTG-- 411 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 ++E + + +V GIR W M Sbjct: 412 --FSDEEIDIVENYVIALGIRGYKKWQEK------------WIRRARGMEETELERINDI 457 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF-LP 601 + + ++ ++ + ++ + ++ + L + EE ++ F Sbjct: 458 KERFLIQVEDVTMVLTKRNKTVSEVTKALYDFLVK-------EELQKKVKEYEIRFGNDG 510 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVN 660 + E + + + + + + + L + L L++ ++ + V Sbjct: 511 ELALEKEYGQVYRIVIELFDKFVELLGEEQIALKEYCELLDAGLEEAKVGVIPPSLDQVV 570 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP---------KRGDRSRRDD 711 + R K V LLG ND P + G + G + + Sbjct: 571 AGDIERTRIKDIKAVFLLGANDMYIPGKENAGGILSEHDRELFQKGGVVLAPGAKEKAFI 630 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY-----IGQSHYLPGDEA 766 ++ + ++LY++Y S D P+ L+Q+L I + P + Sbjct: 631 QKFYLYLLMTKPSEQLYVTYSKVSA-DGKTLRPAYLIQDLRRMYKKMEIQDADCQPDKKE 689 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 L A + L H + + Q RQ+ + + L Sbjct: 690 LTPKSGFAYLIEKLQKKHEGLGTEWQELYTWYRQNPKWRKKIEQIVEACFYEKPKDGLTT 749 Query: 827 TLPETVP-------LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILEGLSRY 878 + + + L++F A F L + R E + D + + Sbjct: 750 RTAQRLYGTILENSVTRLEKFSACAYAHFLSYGLNLREREEYTFQAIDLGNIFHSAIEHF 809 Query: 879 QINQQLLNAL-VEQDDAERLFRRF----------------RAAGDLPYGAFGEIFWETQC 921 + L A + R + Sbjct: 810 A---KKLEAEGYTWTTLPEVRREELIEESVEESIVDYGNTILYSSARNEYIIKRLKRMMR 866 Query: 922 QEMQQLADRVIACRQPGQSMEIDLAC--------------NGVQITGWLPQVQ---PDGL 964 + + L ++ EI +++ G + +V + Sbjct: 867 RTVWALTKQLEKGDFMPGGYEISFGGASGLSTSDIALDGHGRMRLRGKIDRVDICEDEDN 926 Query: 965 LRWRPSLLSVAQGMQLWLEHLVYCASG 991 + + E Sbjct: 927 VYVKVIDYKTGAKAFDLGELYYGLQLQ 953 >UniRef50_B0NKJ8 Putative uncharacterized protein n=8 Tax=Clostridiales RepID=B0NKJ8_EUBSP Length = 1141 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 130/1026 (12%), Positives = 259/1026 (25%), Gaps = 142/1026 (13%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQ--MTLSQKFGIAAN 59 L+ + + E + ++LV Q + + + GI N Sbjct: 3 LQFIFGPSGSGKSYHLYHQIIDESRIHQEQNYIVLVPEQFTMQTQKDLVNMHPCHGI-MN 61 Query: 60 IDFPLPASFIWDMFVRVLPEI-PKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 ID + +F P K + K+ D+ L + Sbjct: 62 IDVLSFVRLSYRVFEETGGGTLPVLDDEGKNLILRKI---------AGDYEGELKVLGGN 112 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQ 178 K F QY + + ET L L++ +EY + Sbjct: 113 MKKLGYVSEVKSVISEFAQYDITEEELERVMETAGEESRLYYKLKDIQVLYRGFMEYLEK 172 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSR-VFICGISALPPVYLQALQALGKHIEIH 237 + + ++ L L + V + G + PV + L L H Sbjct: 173 KYITK-------EELLDVLSQMVCKSDMLKNSTVVLDGFTGFTPVQNRLLLELMIHC--- 222 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 + +DRE P + Sbjct: 223 -----------------------RKVVITVTMDDREDPYVYQ-----------------H 242 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 P LG+ + L L + + + +E Sbjct: 243 PYQ--LFGLGKHMVTTLMRLARDHRIAVDEP-------VCLYGRPPYRFKDHDSLAFLER 293 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + + SI HV +P+ E + + A++ + R+I V+V+++D Sbjct: 294 NLFRYHGKGFGKEPESIGIHVTRNPKEEAMAVAGAIRALVRK-EGYRYREIGVIVSNMDV 352 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 Y A A +P + +R+ + +E SLL + + F E V L Sbjct: 353 YGD----DLEQAFAMYEIPAFMDHKRSILLNSFVEYIRSLLDMAEQNFTYESVFRFLRTN 408 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + F + + L +V GI+ W L M Sbjct: 409 LAGFNF----DEVDRLENYVIGLGIKGYKRWQEK------------WVRRLKGMEEEELE 452 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 V D ++ + + + M L + + L + Sbjct: 453 ALNHCRIILVEKVDGLLYVLKQRSKTVRDITMALYEFMVREDLQVKLAALEERFQA---- 508 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA- 656 + + + + + + V L+ L L++ R+ + Sbjct: 509 --EGKLALAKEYAQVYRIVIELFDKFVELLGDEKVSLNEYCKLLDAGLEEARVGVIPPSV 566 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK---------RGDRS 707 V + R K + +G ND P L G + K G + Sbjct: 567 DQVVAGDVQRTRLKDIKALFFVGANDTYLPGSLLRTGLLSERDREKFARERLSLSPGGKE 626 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 + ++ L ++L I Y S D PS L+QEL + Sbjct: 627 QAYIQKFYLYMNLTKPSEQLNIYYSKVSA-DGKSIRPSYLIQELRRLFPLLSVQDEEGRA 685 Query: 768 NCDESEARVKAHLTCLHTRM----PFDPQNYQPGERQSYAREWLPAASQAGKA--HSEFV 821 + D + + +W KA + + Sbjct: 686 LALREITEKMGIGYLIRGFQGNGEGMDAAWKELYTWYKKSPKWQSKVESLIKAGYYRRPM 745 Query: 822 QPLPFTLPETVP-------LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILE 873 L + + + + ++RF F L + R E D Sbjct: 746 DGLTEAVAKRLYGEEFEDSITRMERFQTCAFAHFLTYGLNLQERQEYDFQAVDMGNVCHN 805 Query: 874 GLSRYQ------------INQQLLNALVEQDDAERLFRR--FRAAGDLPYGAFGEIFWET 919 L R+ + ++ + +++ E + Sbjct: 806 ALERFSRKVEKEGCGWVGLKEEKRASFIDESVEEAITDYGNSVLYSSARNEYMIVRMKRM 865 Query: 920 QCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ 979 + + L ++ A + E A + + + + + Sbjct: 866 LERTVWALTKQLSAGDFQPSAYEFRFANGKI---DRIDTCEDGDKVYVKVLDYKTGSKAF 922 Query: 980 LWLEHL 985 + Sbjct: 923 DVVALY 928 >UniRef50_A5ZW43 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZW43_9FIRM Length = 1109 Score = 313 bits (801), Expect = 3e-83, Method: Composition-based stats. Identities = 143/1034 (13%), Positives = 290/1034 (28%), Gaps = 148/1034 (14%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQ--MTLSQKFGIAAN 59 L+ N V RE P + ++V Q + + + + GI N Sbjct: 3 LQFIIGNSGAGKSFRAYQRVIREAAAHPEKMYYVIVPEQFTMQTQKTLVEMHPQKGIL-N 61 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 ID + +F V + K ++M +L +L++ L+ YL + Sbjct: 62 IDVLSFERLAYRIFEEVGGDTRKVLEETGKNM------ILQKLVQVSQKKLV--YLKNQM 113 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 K F QY V + + + L A L++A EY Sbjct: 114 KKPGYLDEVKSLISEFMQYEVRKEELDKMIQDASDKPLLQMKLKDVAVLYEAFREYLSDH 173 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLP-SRVFICGISALPPVYLQALQALGKHI-EIH 237 + +E L L S V + G + PV ++ L + + Sbjct: 174 FMTA-------EEVLEVLAKEIPFSEKLKGSTVVLDGYTGFTPVQHTVIRELLQVCEHVT 226 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 + T R P L + + R E Sbjct: 227 VTVTMDVREQLLAKGKPHELFYMSHKMIRSLSEFTRDMKEP------------------- 267 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 W K G + +A A +E+ Sbjct: 268 ----IWVKAGAE----------------------------------SRFAKAPALNFLEQ 289 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 ++ + + +P+RE+E R+ ++ + I V+ +++ Sbjct: 290 NLFRYHRGAYNEEQKEVQIFQAGNPEREMEETARRISRLV-REHGYRYGQIAVITGNLEE 348 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 Y + VF +P+ + ++ + +P +E + L + F E V Sbjct: 349 YGSIARHVF----DAAEIPFFVDEKHSVLMNPFVEYLRAALEMTVQGFSYESVFRY---- 400 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + D++ + L +V GIR W R+ G Sbjct: 401 LRCGMSDLSRREVDILENYVIALGIRGFRK----------------WNETWVRIYRGMDP 444 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + + E +AE + + + + +R ++E L V L+ Sbjct: 445 AVIMDLNEIREHFTEEVRELAEGFSGKKKTVGEYSRYLYDFIVKRQIQEKLKV--QELHF 502 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA- 656 D E I ++ + + + V R L + Q +++ Sbjct: 503 KQQGDRAREKEYAQIYGIIMDLLDKMVSILGEEVVSPEEFRQLLETGMTQAKVALIPPGI 562 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK---------PKRGDRS 707 V I + R + + +G+N+G P+ G + G + Sbjct: 563 DQVLIGDMERTRLKDIRALFFVGVNEGCIPKNTESGGILTEMDRDFLGNQGIELAPGPKE 622 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA- 766 + R+ L + L +SY + + P+ L++ + + H ++ Sbjct: 623 LMNMQRFYLYLNLTKPSESLCLSYSRSNGK-GEAVGPAFLIRTIQTLFPEIHIERAEKPE 681 Query: 767 ------LNCDESEARVKAHLTCLHTRMPFDP-----QNYQPGERQSYAREWLPAASQAGK 815 + S + +LT R Y + L A+ K Sbjct: 682 KELDLLETPNTSVGYLLENLTDEEKRKENQLFAELYSWYLNSPDYCTMTKKLTEAAFLRK 741 Query: 816 AHSEFVQPLPFTLPETVPL---ETLQRFWAHPVRAFFQMRLQVNFRTEDSE-IPDTEPFI 871 + + + L + L+RF A F + L++ R E D I Sbjct: 742 PVDQISKSVAKALYGEISPNGATRLERFSACAFAHFLKYGLELTERAEYEFRAMDMGNII 801 Query: 872 LEGLSRY-------QINQQLLNALVEQDDAERLFRRFRA-------AGDLPYGAFGEIFW 917 + L + Q+N + L+ A+ + A E Sbjct: 802 HQALEEFAVELRQKQLNWRELSDEERDTIADNCLDKIAADYGNTILQSSARNYYMIERTR 861 Query: 918 ETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQG 977 + + L +++ R + E+ + + L +Q + + + Sbjct: 862 RILRRTVWALQEQLKNGRFEPEGFEVAIGGGRI---DRLDVMQEEDRVYVKIIDYKTGNT 918 Query: 978 MQLWLEHLVYCASG 991 + Sbjct: 919 SFDLVSIYYGLQMQ 932 >UniRef50_C0FS44 Putative uncharacterized protein n=2 Tax=Roseburia RepID=C0FS44_9FIRM Length = 1143 Score = 311 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 128/1074 (11%), Positives = 285/1074 (26%), Gaps = 166/1074 (15%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQM--TLSQKFGIAAN 59 L+ N + + + +E + P + ++LV Q + L + I N Sbjct: 3 LQFIFGNSGSGKSSYLYRNILKEAAEHPEKNYLVLVPEQFTMQTQRELVRLEKSHAI-MN 61 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 +D A + +F + + + +++ +L +L + L L + Sbjct: 62 VDVLSFARLAYRVFDELGKQNLRVLEETGKNL------VLRKLAGEQKKNL--SVLGGNL 113 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 ++ QY V ET + E L + ++ + EY Sbjct: 114 NRMGYISEVKSLISELTQYNVSPEKLDTFLETEDVGETLRLKMQDISVMYHSFSEYLQGQ 173 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFIC-GISALPPVYLQALQALGKHIEIHL 238 + + L A + V + + P+ Q L+ L E + Sbjct: 174 YITS-------EEVLSLLCDAAEDSNIIKDSVIVFDEFTGFTPIQNQLLRKLLVLSERII 226 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 E+ Sbjct: 227 ----------------------------------VSVTMDAGEDFYHCRGEQELFS---- 248 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVT-PDNLLHNIQSDILELENRAVAGVNIEE 357 + + + +L + + V D H ++ A + +E+ Sbjct: 249 -------MSKKTVSVLMKMAEELHVTVEEPVVLSDGKNHRYKN--------APSLYFMEQ 293 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + + +P+ E+ + + + + +DI V+ D+ Sbjct: 294 NLFRPYYHKWRQKEDELRIVSLKNPREELHFVAREITKFV-REKQYCYKDIAVVTGDVSL 352 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 Y ++ +F + +PY + R HP +E ++L + + F E V L Sbjct: 353 YDNYVDEIFAAYD----IPYFLDQTRTILFHPFIEFIRAVLEVVELDFSYESVFRFLRCG 408 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + DITE+ + L +V GIR + T + + Sbjct: 409 LT----DITEQQIDLLENYVLAKGIRGRKKWEKQWTFVFDDTEKENLTE------MNEVR 458 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 E G + + + + L L+ +L E + Sbjct: 459 EKIYGFFAPLSEAFTQGKTVRDETTVLYELIEKL--------------EIEQKLKQKELE 504 Query: 598 FFLPDAE-TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 F + I + + + + + +P+ D L + R+ Sbjct: 505 FERQGNQVKAKEYAQIYKIVMDLFDKVVDFLGDEVLPVKEYADILDAGFEAARVGVIPPG 564 Query: 657 -GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK---------RGDR 706 V I + R K++ +G+NDGV P+ G ++ K G R Sbjct: 565 NDKVTIGDIERTRLNHIKILFFIGVNDGVVPKAGNAGGIISQFEREKMVACHLELAPGAR 624 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA 766 + R+ + LY+++ + D S V L+ + +E Sbjct: 625 EKVFIQRFYLYLNVTKPSDFLYVTFSKVNA-DGKALRRSYFVGTLLKMFPEKTVEEIEET 683 Query: 767 LNC------------------DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP 808 + D+ A + + E + + L Sbjct: 684 TSADCIMTPKSSMAFFLEGLQDDDRASDFSQVEKRKLWNALSKFYLTDSEWKPETEKLLK 743 Query: 809 AASQA--GKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP- 865 A + + S V + + L+RF A + L++ R Sbjct: 744 TAYEVHSDEPISHAVTQALYGTVLENSVTRLERFAACAYAHYLNYGLRLKERQLLEFASV 803 Query: 866 DTEPFILEGLSR------------YQINQQLLNALVEQDDAERLF--RRFRAAGDLPYGA 911 D + L + I + + +E+ + + + A ++ Sbjct: 804 DMGNIYHDALEHFSRRVEKSEYTWFNIPEDVQETFIEESMNDAIAGCKNAGAFENVRNRY 863 Query: 912 FGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQITGWLP 957 +T + + L ++ + E+ + + G + Sbjct: 864 LTGRMRQTIKRTVWALTTQIQKGKFVPSDFEVSFSRADKLDAIRFQLSDEEKMNLLGRID 923 Query: 958 QVQPD---GLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRF 1008 +V + + + L + + Sbjct: 924 RVDTYETSDKVYVKIIDYKSGNTSFSLVNLYHGLQLQLVVYMNAALELEEKRHP 977 >UniRef50_A9KTE7 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Clostridium phytofermentans ISDg RepID=ADDB_CLOPH Length = 1147 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 138/1051 (13%), Positives = 281/1051 (26%), Gaps = 147/1051 (13%) Query: 16 LMEFIVERERLDDPFEPEMILVQSTGMAQWLQ--MTLSQKFGIAANIDFPLPASFIWDMF 73 + V L +P +ILV Q + +T+ K GI NID + +F Sbjct: 17 QLYQRVIESSLKEPKGKFLILVPEQFTLQTQKDLVTMHPKKGIH-NIDILSFLRLAFRIF 75 Query: 74 VRVLPEIP-KESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAA 132 K + K+M R+ L K + Sbjct: 76 EETGGNDRLVLEDTGKSMIVKKVM------------MEKRNDLILFGANVKKQGFVEEMK 123 Query: 133 DLFD---QYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANL 189 + QY ++ + E L +++A E+ +L Sbjct: 124 SIISELAQYSIHTDELQKMKEVAKGKPLLNHKLTDIMTIYQAYEEFLQDKYINSEEILDL 183 Query: 190 YQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIE-IHLLFTNPCRYYW 248 I+ S + + G + P + L L K + + + T Sbjct: 184 LCDVIDDSSFVND------SEICLDGFTGFTPSQYKLLSHLMKKAKSVTVTIT------- 230 Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR 308 D + + + + GK+ Sbjct: 231 ---MDESQINRKQEEHQLFYLS---------------------------------GKMAE 254 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 L+DL +Q++ ++ P L+ + + ++A +E+ + Sbjct: 255 ----KLTDLAITQKI----EIKPPILVASENGGYSYRFHNSMALSALEKNIFRYPYKSFT 306 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 I+ P E + +L E+ +DI ++ ++ Y ++ Sbjct: 307 EEQDDISITAAKDPMAEARHAVIEITRLLREEE-YRYKDIAIVSGAMEVYGDIVKRELEL 365 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A +P + ++ ++PV+E S L + F E + L + D T + Sbjct: 366 A----GIPCFVDHKKNILTNPVVEFLRSALDVVTHNFDYEAIFRFLKCGLT----DFTMD 417 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + +V GIR ++ E + + L + + Sbjct: 418 EIDLFENYVIAFGIRGKYRYEHEWERKYKTNY---------EVDLEKINYVRECILKEFT 468 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 P E + + + L E + ++ + D Sbjct: 469 PLYE---TLTSKKSSVRECVNALYNLLCTYHIEEKIHIFVEKFKAQGE---KEDKLRAKE 522 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPM 667 I + I + D +PL RD L + ++ + + + + Sbjct: 523 YEQIYRMVLEIFDRMVELLGEDVLPLKEFRDILDTGFREAKVGLIPPSIDQILVGDIERT 582 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD---------RSRRDDDRYLFLE 718 R K + LG+NDG+ P+ G +++ D R + Sbjct: 583 RLKDIKALFFLGVNDGIVPKANPGGGILSDAERQLFADHEIELSPTKRQTAYLTEFYLYL 642 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ------SHYLPGDEALNCDES 772 L Q KLY+ Y S L+ ++ + DE L D+ Sbjct: 643 NLTKPQNKLYLYYSKLD-VSGKSIRASYLLGKISKIFPKLKIYDADRKSREDELLGTDQG 701 Query: 773 EARVKAHLTCLHTRMP-FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET 831 + + + L P + Y G + + Q L + Sbjct: 702 LSYLISVLRDYEGEQPKLWREVYHLYVSGQIKGRISLDKVLQGVFYQNYEQGLTKEVARK 761 Query: 832 VP-------LETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIPDTEPFILEGLSRYQINQQ 883 + + ++++ A F Q L + R E +PD E L R+ + Sbjct: 762 LYGETLLGSVTRMEKYAACAFAHFLQYGLSLEERQEYKISMPDIGSLFHEALERFSKALK 821 Query: 884 LLNALVEQDDAE-----------RLFRRF---RAAGDLPYGAFGEIFWETQCQEMQQLAD 929 L+ + + F + + L Sbjct: 822 ELDISWHELPEDVRISLGERCVREAVENFGNGILESSKRSAYLATRVERILQRTTKTLTH 881 Query: 930 RVIACRQPGQSMEIDLACNG--VQITGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEH 984 ++ S E + + + G + +V DG L + + Sbjct: 882 QLQQGVFEPGSYEQYFSHADRYLNLRGRIDRVDLYEQDGKLYVKVIDYKSGSTSFDLMNL 941 Query: 985 LV-YCASGGNGESRLFLRKDGEWRFPPLAAE 1014 G S ++ + Sbjct: 942 YYGLQLQLGVYLSAAMELMKEQYPNHEIHPA 972 >UniRef50_C6JEU6 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEU6_9FIRM Length = 1124 Score = 307 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 137/1031 (13%), Positives = 276/1031 (26%), Gaps = 170/1031 (16%) Query: 18 EFIVERERLDDPFEPEMILVQSTGMAQWLQ--MTLSQKFGIAANIDFPLPASFIWDMFVR 75 V RE ++ P I+V Q + + + GI NID + +F Sbjct: 19 YERVIRESMEHPERNYYIIVPEQFTMQTQKTLVEMHPGKGIL-NIDILSFERLAYRVFEE 77 Query: 76 VLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLF 135 + K +SM +L +++++ L YL +K F Sbjct: 78 TGGDNRKVLEDTGKSM------VLQKMVQQHRKEL--AYLGSQMNKPGYLDEVKSLVSEF 129 Query: 136 DQYLVYRPDWLAQWETGHLVEGLGE-AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFI 194 QY + R + LA+ + + L E L+++ E+ + + Sbjct: 130 MQYDI-REENLAEMKEKAQNQPLLEMKLKDVGILYQSFREFLKGHYMTG-------EEVM 181 Query: 195 ETLESATTCPPGLPSRVFIC-GISALPPVYLQALQAL---GKHIEIHLLFTNPCRYYWGD 250 + L L F+ G + P+ + L+ L I + + Sbjct: 182 DVLLKQLPFSEKLKGAEFLFDGFTGFTPIQVNVLRELLVIADRISVTVTM---------- 231 Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 + G P + + Sbjct: 232 ------------------------------------DEREDAFSPGKPYQ--LFFMSKQM 253 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 I L+ L E ++ + + A A +E+ K Sbjct: 254 IRALAGLTRDLEDPVYLKPSGQSRFAQ-----------APALQFLEKNIFRYRKGVYAEE 302 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 I SP E+ R+ ++ +I V+ +++ Y+ VF A Sbjct: 303 QQEIKIFTAPSPLEEMREAARRMSELVRTC-GYRYGEIAVITGNLEEYARLAAQVFEEAD 361 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 +PY I ++ + +P +E + + + F E V + ++T E Sbjct: 362 ----IPYFIDEKHSVMMNPFVEYLRAAMEMAVQGFPYESVFRY----LRCGMSEVTREQA 413 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 L +V GIR G + L A+ + + Sbjct: 414 DKLENYVLALGIRGYKKWSEKWVRVYRGMGAEKIQE-----LNEIREIFAEEVRELAQGF 468 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 + E L + + ++W++ QER +E D E Sbjct: 469 GSGKKTVEEYCRILYEFIQKSDVWQKLKRQERKFKE-------------SGDKAMEKEYN 515 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRS 669 I ++ + + + V R L L Q +++ + V + + R Sbjct: 516 QIYGIVMDLLDKMVEILGEETVNRQEFRQLLESGLSQAKVALIPPSIDQVMVGDMERSRL 575 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK---------PKRGDRSRRDDDRYLFLEAL 720 K + +G+N+G P+ G + G + + R+ + Sbjct: 576 KEIKALFFVGVNEGNIPKSTQTGGILSELDRDFFQEQGVELAPGPKELMNMQRFYLYLNM 635 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE-------------AL 767 +KL +SY + + P+ L+ + + G Sbjct: 636 TKPGEKLILSYSDTNAK-GEGISPAYLIGSICSLYLKLEIEGGAGVRPHKNSINNYCYPE 694 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY--AREWLPAASQAGKAHSEFVQPLP 825 N + L + D + + W + + VQ Sbjct: 695 NPEAGIDLFLEKLVQETEKEHEDIREQADETDAMFGELYSWYLRNPEYRSRVQKLVQSAF 754 Query: 826 FTLPETV----------------PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTE 868 PE + L+RF A F Q +++ R E P D Sbjct: 755 AGKPEDIISQSVAKALYGEVSPYSATRLERFAACAFAHFLQYGMKLTERVEYEFKPMDMG 814 Query: 869 PFILEGLSRYQ-------INQQLLNALVEQDDAERLFRRFRA-------AGDLPYGAFGE 914 + E L + + L + A+R A E Sbjct: 815 NVMHEALESFAEEVRKRGMKWTELTEQERNEIADRCLDNIVADYGNTVLKSSARNEYMIE 874 Query: 915 IFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSV 974 + + L ++ + E+ + + ++ + + Sbjct: 875 RTRRILRRTVWALQKQLEQGEFQPEGFEVTFGGGRI---DRVDIMEDQNKVYVKVIDYKT 931 Query: 975 AQGMQLWLEHL 985 + Sbjct: 932 GNTSFDLVYLY 942 >UniRef50_C4G1J6 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G1J6_ABIDE Length = 1133 Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats. Identities = 129/1061 (12%), Positives = 283/1061 (26%), Gaps = 187/1061 (17%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQ--MTLSQKFGIAANIDFPLPASFIWD 71 L + +E +P + ++V Q + + LS+ I NID + Sbjct: 15 SELCFNKIVKEAEKNPDKNYFVIVPEQFTLQTQKDLVRLSRAKAI-MNIDVLSFMRLAYR 73 Query: 72 MFVRV-LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSK 130 +F + + E K + KL+ L + L + + ++ K Sbjct: 74 VFEELNIKERLILEDTGKNMVIRKLLGGLKEELCFYKNAVGK---QGFTEDLK------S 124 Query: 131 AADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLY 190 F QY + PD L + + L A +++A Y + Sbjct: 125 LLSEFMQYGIT-PDNLTKIKEKTSSPVLAAKLQDAALVYRAFNNYKKEKYISA------- 176 Query: 191 QRFIETLESATTCPPGLPSRVFIC-GISALPPVYLQALQALGKHIEIHLLFTNPCRYYWG 249 ++ +E L + + L + V G + PV L+ + L E L Sbjct: 177 EQILEVLANEISRSKLLENSVICFDGYTGFTPVQLKVIDLLLVKAEHLLFTLTVSE---- 232 Query: 250 DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD 309 D + L +D Sbjct: 233 ---------------------------------KDYYSEEDEKFR--------LFHLSKD 251 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 I ++ L + ++ V E + A +E + D Sbjct: 252 TINKINKLAGERGVEVARPV------------TAEFCGKVKALSLLERQIFRYPVKKTDS 299 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 +S+ +VC +P+ EVE L +L+++ D L RDI V++ D++ Y + Sbjct: 300 E-NSVRINVCKNPREEVERLIPDILSLV-RDEGLRYRDIAVVLGDMEEYGEMVV----DT 353 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + + +P + ++ +P +E + L + + F + V+ L ++ Sbjct: 354 LSSKGVPCFLDSKKTIADNPFVEYIKASLLVVEENFSYDAVMRYLRSGF----ANVDVYE 409 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + ++ GI+ Q ++ + P Sbjct: 410 VDIFENYILRRGIKG------------FRRYQTSFIKDEASEEESISEGLRVTLVDEFKP 457 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + + L + E L + + Sbjct: 458 LYDILKSKKS---KAEDFVKALYEFVSASGSEERLMKLSADFEE------KGKMIAAREY 508 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMR 668 + ++ + + + + R L + + + I + R Sbjct: 509 AGCYRIVMSVFEKMYELLGDEKLSIEEFRSILESGFSEGKAGFIPPGLDQIVIGDVERTR 568 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG---------DRSRRDDDRYLFLEA 719 KV+ LG N+G P+ + G ++K K + R +++ Sbjct: 569 LKDIKVLFCLGFNEGKVPKSVGARGIITDTEKEKLAGMNVELAPTAKERAFREQFYIYML 628 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN-----CDESEA 774 ++LY+SY ++ + PS ++ L Q E ++ + Sbjct: 629 FSKPTERLYVSYSSSNM-EGKPIKPSSVINRLRAVFKQEIVSEPTEEVSLINEIRKDGGM 687 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ-AGKAHSEFVQPLPFTL---PE 830 + N Y + KAH ++ T Sbjct: 688 ELILSAIKKRDLKDSTVINLIKYYNCHYDDRYNKIIEGTVSKAHGNSLEKYIATELYGEL 747 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV- 889 + L+ F + F + L++ R E F L+ + I ++L Sbjct: 748 KGSVTRLELFSSCAYAHFIKHGLRLKERKE---------FELKPMDIGNILHEILERFAK 798 Query: 890 ----------------EQDDAERLFRRFRAAGD------LPYGAFGEIFWETQCQEMQQL 927 + GD + ++ + Sbjct: 799 KVVEKGESFNSISEETREAIQAESIAEAFNYGDDIFNASFRNNYRLTRLKRITDRAVRTV 858 Query: 928 ADRVIACRQPGQSMEIDLACNGVQITGWLPQVQP---------------------DGLLR 966 ++ + + E + G + G + ++ + + Sbjct: 859 LTQIKSGLFTPVAFEEEFVTKGFK--GRIDRIDSVLSDYLPDGTRLIDSKEFADFNKVRY 916 Query: 967 WRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWR 1007 R + Y + L ++ + Sbjct: 917 MRVIDYKSGNKVLDLDR--AYYGLDLQLFTYLKYIREEIGK 955 >UniRef50_A7GAI7 ATP-dependent helicase/deoxyribonuclease subunit B n=15 Tax=Clostridium RepID=ADDB_CLOBL Length = 1150 Score = 304 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 124/1070 (11%), Positives = 286/1070 (26%), Gaps = 183/1070 (17%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQW---LQMTLSQKFGIAA 58 LR + ++ +D P ++LV Q L L +K G Sbjct: 3 LRFIYGRAGSGKSQYCLNSIKNRIEEDIDRPLILLVPEQFSFQAEKNLIEVLDEKTG--F 60 Query: 59 NIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 + +F V K + E LL + + D+ Sbjct: 61 KTQVLSFKRMAYRVFNEVGGITAK------------------HMNESGKSMLLYNIIEDN 102 Query: 119 SDKRKLFQLSSK----------AADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPL 168 + K+F+ ++K F +Y + P+ + + L A + Sbjct: 103 KNNLKVFKKAAKRQGFITTISDIITEFKRYNIT-PEIILNNLENIEGDNLKYKMEDLALI 161 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQ 228 + H+ + + + ++I S+ P L+ Sbjct: 162 FSQFETRLHKNYIDNEDDLTILVEKLNKSKQFDNAE------IWIDEFSSFSPQEYSVLE 215 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 L C Y Sbjct: 216 KLLLKSYRI--NITLCTDYLN-------------------QGRFVDT------------- 241 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR 348 DV +P+ ++ L + + ++ D Sbjct: 242 ----TDVFSPI--------KNTENKLLQIIEDNNIKLDKP-------IALKCDPCARFKN 282 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 + ++E+ S + I + E+E ++ + D +DI Sbjct: 283 SAELQHLEKNMFSFPYKEYKNETKDICMLKTLNQFTEIENTAKDIIKLCI-DKGCRFKDI 341 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V+ D++ Y I +VF +P+ I +R ++P++ +S L + + E Sbjct: 342 AVITGDLEGYENIISSVFLQY----NIPFFIDKKREINNNPIIVLILSALEVLSKNWTYE 397 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 V L +L DI E + L +V +GI+ ++ + L Sbjct: 398 SVFRYLKTGLL----DINNEEMDILENYVLANGIKGYQWTNDKPWEHKSFSNYELEDQAL 453 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 +L + + + + L + + ++ + Sbjct: 454 KELL-----AKINDIRYKAMEPIVTLNKNFKSIDKAKEFCEVLYEFLCNINLPDKIQNMI 508 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 + + E + I ++ + + + + L L + Sbjct: 509 EDFK------VEGEIEKASEYNQIWNIVMEVLDQIVEVIGEEKISLKEFFKILQTGFSEY 562 Query: 649 RISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 I V + ++ +RS + ++G+NDG++P L G + GD+ Sbjct: 563 EIGLIPPTLDQVMVGSITRLRSHNINTLYIVGVNDGIFPSPLKEEGILSDDDREFLGDKG 622 Query: 708 RR---------DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP--------SVL--V 748 ++++L L + + L +SY + P + + Sbjct: 623 LEIAKDTKSIAFEEQFLVYSTLTTPSKYLRLSYPIADG-EGKTLRPSIIISRIKKIFANI 681 Query: 749 QELIDYIGQSHYLPG-DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 E D + + + + + ++L + D + W+ Sbjct: 682 CEENDIVKLNGEEEELKNISSAKPTFNYLISNLRKDVEGVKIDNIWGDTYKWYLENEFWI 741 Query: 808 PAASQAGKAHSEFVQPLP---------FTLPETVPLETLQRFWAHPVRAFFQMRLQVNFR 858 ++ K Q + P + + +++F P F Q L+ R Sbjct: 742 EKLNRLIKGFDYTNQSKYIETKKIRNLYGKPLKISVSRVEKFSQCPFAYFVQYGLKAKDR 801 Query: 859 TEDSEI-PDTEPFILEGLSRYQ-------INQQLLNALVEQDDAERLFRRFRAAGDL--- 907 + PD F+ L ++ + ++ +++ ++L L Sbjct: 802 KIFNLSYPDLGIFMHSILEKFSHELEKKGLEWDTMDLNWAEEEIDKLINEELDNKSLDIL 861 Query: 908 ----PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG-------------- 949 Y + + + + + + + E+ +G Sbjct: 862 NSSKRYEYVTKSVKKILKRSIWLIGEHIKRGNFKPSYYELSFDIDGDYPPIAMELHSGEV 921 Query: 950 VQITGWLPQVQ---PDGLLRWRPSLLSVA-------QGMQLWLEHLVYCA 989 + + G + +V DG + L+ Sbjct: 922 INLIGRVDRVDLLQKDGATYLKIIDYKSGIKEFKLSDVYYGLQLQLLIYL 971 >UniRef50_UPI00019738F1 ATP-dependent nuclease subunit B n=2 Tax=Clostridium RepID=UPI00019738F1 Length = 1184 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 136/1080 (12%), Positives = 289/1080 (26%), Gaps = 162/1080 (15%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQ--MTLSQKFGIAAN 59 L+ ++ + R+ L++P +V Q + + + G+ N Sbjct: 3 LQFIIGGSGSGKTHVLYENLIRQSLEEPEGKYFAIVPEQFTMQTQKDIVAMHPCHGVR-N 61 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 ID + +F + E P L + +LR Sbjct: 62 IDIVSFERLAYRIFEELAVETPAV------------------LDDMGKSMVLRKVAAGRK 103 Query: 120 DKRKLFQ-----------LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPL 168 + +LF L S ++ F QY + + L + G L + + + L Sbjct: 104 KELRLFGSHLDKSGFIGELKSMMSEFF-QYGITG-EALKEMAEGTQSAMLRQKLSDMSEL 161 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVF-ICGISALPPVYLQAL 227 ++ EYT R + ++ L + V + G + PV + L Sbjct: 162 YEGFREYTK-------DRFIAKEEILDILCRVIPRSELIKDSVVTLDGYTGFTPVQYRLL 214 Query: 228 QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF 287 + L + RQ + + LF Sbjct: 215 ELLLTYC----------------------------RQVTVTITMNPEENPYREKPIQHLF 246 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN 347 + LA+ GR +L + + F + + + Sbjct: 247 HLSSHTVCRLTDLAASSGAGR-TEDILLKGDCPR----FRESPELSKIERELFRYGRRGE 301 Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDS---SITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 + + + + H +P RE++ + ++ ++++ Sbjct: 302 QKEGKQEEGKRKEEKQNQTGCGAPHRKSGLILHQAENPIREIQFVCAQIERLVKK-EGYR 360 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 RDI V+ + YS + F +P + ++ +P++E + + Sbjct: 361 YRDIAVVTGALSDYSGELTRQFQE----NKIPCFLDSKKNILGNPMVELLRASMETLTED 416 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 F E V L + E L L +V GIR ++ W Sbjct: 417 FSYESVFRYLKTGM----AVEDVEKLSRLENYVKALGIRGYKRWNSR------------W 460 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 L E + Q V P+ + ++ + + L + + E L Sbjct: 461 ERVYRDGELLNLDELNEFREQIVAPFRPLREVFSDRSSSVREMTAALVHFLEEIHAEEKL 520 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 EW +M +AE E + I + + V L Sbjct: 521 GEWEKRFSEM------GEAELEKEYSQIYGLVMELFDRVAALLGDEVVSRREYAQILDAG 574 Query: 645 LDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 ++ ++ V L R K + +G+NDG+ P + G +++ Sbjct: 575 FEEIKVGLIPAVVDRVVAGDLTRTRLSHIKALFFVGVNDGIVPSAVRRGGILTEAERRLL 634 Query: 704 GD------RSRRDD---DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 + + R++ +R + L++++ S PS L+ ++ Sbjct: 635 KEKGVELAPTAREEGFLERLYLYLVMTKPSDTLFLTWSQTSAA-GKGLRPSSLIGQVKSL 693 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD---PQNYQPGERQSYAREWLPAAS 811 + DE S + L P+ + R + Sbjct: 694 FPELTETRSDEFEEAAWSLPAGRRALIGGLRERSASSSQPKFLELYRRFYTDSGYREMTR 753 Query: 812 QAGKAH--SEFVQPLPFTLPETVP-------LETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 + +A S + + T + + ++R+ A F L++ R E Sbjct: 754 RLVEASFCSYEDRGIGRTAAGRLYSPILRGSVTRMERYAACAYAHFLNFGLELRERREYE 813 Query: 863 -EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRA--------------AGDL 907 D + + + E + Sbjct: 814 LAAADIGNMFHSSIDLFFKTMKEEGRSFRTLSPEDRKELVGRCVSAVTAEYGNTVVSASS 873 Query: 908 PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQIT 953 G + + L +++ E+ V + Sbjct: 874 RNEYLGRRVERITDRTVWALTEQLKKGDFEPAGFELTFTPADNLKAMKIPVSRTEAVHLQ 933 Query: 954 GWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPP 1010 G + ++ + + + Q E ++ L + E R P Sbjct: 934 GRIDRMDLCEDEDKIYVKIIDYKTGQTKFELTE--LFYGLQMQLVVYLDAAMEKEQRKHP 991 >UniRef50_A8FBR0 ATP-dependent helicase/deoxyribonuclease subunit B n=5 Tax=Bacillus RepID=ADDB_BACP2 Length = 1169 Score = 303 bits (774), Expect = 4e-80, Method: Composition-based stats. Identities = 149/1191 (12%), Positives = 325/1191 (27%), Gaps = 195/1191 (16%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF--GIAANIDFPL 64 S + + ++ + + L P + LV ++ L++ G Sbjct: 12 SGKTTAILEEIKEQLRLDPLGPPI---IFLVPDQMTFL-MEYELAKTSEAGGMIRAKVFS 67 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 W + + + + LLR + + DK K+ Sbjct: 68 FTRLAWSILQQTGGANRQF------------------VTSTGIQMLLRKVIEEQKDKFKV 109 Query: 125 F-------QLSSKAADLFDQYLVY--RPDWLAQWETGHLVEGL------GEAQAWQAPLW 169 F + ++ Y P+ + + ++ E L+ Sbjct: 110 FKKASDKPGFVEQIEKTMAEFKRYCMLPEEIEKISVESMLSEYTEERRAAEKLHDLHVLY 169 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 + + E+ NL + I + E + ++I G P L ++ Sbjct: 170 QQMEEHLQDEYVHSEDYLNLLAQQIPSAEEIK------GAHIYIDGFYQFTPQQLLVIEQ 223 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L H + Y + L ++ + ++ + SE + + Sbjct: 224 LLLHAAKVTAAFTVDQSYHDRQPNELDLFRMTGKTYFQLYQLAKECGADISETIFERNHR 283 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA 349 P LA Sbjct: 284 HLYT----PDLA------------------------------------------------ 291 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 +E +P +T S + E+E + +L ++ + L RDI Sbjct: 292 ----YLEHQYEQRPVQPYQENTPHLTVSKSASKRAEIEGVARDILDLV-REKGLRLRDIS 346 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 V+ +D Y ++ VF +P+ I + Q HP++E S L + + E Sbjct: 347 VVARHVDDYKDTLKEVFRDYD----IPFFIDGNESMQYHPLIELIRSSLDVIKGNWRYEA 402 Query: 470 VLALLDVPVLAAR---FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 V + L + E L + G++ + R Sbjct: 403 VFRCVKTEFLFPLEITKNKAREQADQLENYCIAYGVKGERWTNGSRFHYRRFQSLDEDFR 462 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 + + M + EW + P + + ++ + ++ + LE Sbjct: 463 QTDQEIEMEQMLNDVKEW--ITPPLYQLQKRLKNAQKVRDMVEAVYVFLEEIQVPDKLE- 519 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 + L A + ++ E + + + L + + L Sbjct: 520 -----KARLEAEEAGRLAEAMQHGQVWDAVIQLMDEFVDMLGDEELSFPLFQQMIDTGLA 574 Query: 647 QERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 + + + V I ++ R K + ++G+NDGV P + + + Sbjct: 575 SLKFALIPPSLDQVFIGSMDLSRMYQVKCMFIIGVNDGVIPARPSDESVLSEDDREWLKR 634 Query: 706 ---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV---QELID 753 + R D+++L +AL S LY+SY + PS L+ QEL+ Sbjct: 635 AGAELAETGKERLLDEQFLIYQALSSPSHHLYLSYAASDA-EGRSLLPSPLIKYCQELMP 693 Query: 754 YIGQSHYLPGDEALNCDESEARVKA----------HLTCLHTRMPFDPQNYQPGERQSYA 803 Q+ Y+ E L DE V L + P + + Sbjct: 694 NHQQALYVLDPELLEDDEQLKFVANEHVSLSYTISQLQQWLNQYPISGVWWSVYNYLMTS 753 Query: 804 REW------LPAASQAGKAHSEFVQPLPFTLPETVP--LETLQRFWAHPVRAFFQMRLQV 855 + + +A + + + +++F A F L++ Sbjct: 754 PNRDVSKNIMSSLFFTNRAKPLKPNVTKELYGDHIQGSVSRMEKFNACAFSHFASHGLKL 813 Query: 856 NFRTEDS-EIPDTEPFILEGLSRYQINQQLLNALVEQ----------------DDAERLF 898 R E PD L I+ L+ + + Sbjct: 814 KDRQFYKLEAPDIGQLFHSALKH--ISDTLVEQKKDWKNLTKEDCVTYSRHAIEQLAPRL 871 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG--------- 949 ++ + E + + L++ +E+ G Sbjct: 872 QKEILLSSNRHAYIKEKLQKILIRVSSILSEHAKVSGFSPVGLELGFGGQGPLPPFTFQL 931 Query: 950 -----VQITGWLPQVQP---DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLR 1001 +++ G + +V L R ++ E VY + L L Sbjct: 932 KNGCTMELVGRIDRVDKAEGSKGLFLRIVDYKSSEKGLDLAE--VYYGLALQMLTYLDLT 989 Query: 1002 KDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDD 1061 + + A A + + + + P+ + + + + +L +D Sbjct: 990 ITYSKEWLGIEATPAGILYFHIHDPFIQA---PIPLAEDEIEQ--EIFKKFKMKGLLLED 1044 Query: 1062 STLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRF 1112 K + L++ ++ G D ++ + + +Q Sbjct: 1045 VEAVKLMDQTLESGRSQVIQAGLKKDGSFR---SDSAVLSEDHFHILTQHV 1092 >UniRef50_C6LH76 ATP-dependent nuclease subunit B n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LH76_9FIRM Length = 1162 Score = 301 bits (769), Expect = 1e-79, Method: Composition-based stats. Identities = 137/1069 (12%), Positives = 278/1069 (26%), Gaps = 132/1069 (12%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF--GIAAN 59 LR+ + + + + P + +++V Q Q L + G N Sbjct: 3 LRLILGSSGSGKSHYIYSSIIEAAVQSPEKKFLVIVPEQFTMQT-QRELVRLHPDGGLLN 61 Query: 60 IDFPLPASFIWDMFVRVLPEIP-KESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 ID +F V + K + + + + L L + Sbjct: 62 IDILSFQRLAHRIFEEVGADKRTVLEELGKTLLLRRAASRVQDEL---------KVLKGN 112 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQ 178 K Q QY + + L L+++ E Sbjct: 113 LKKMGYLQQMKSMISELTQYDIDSEKMERLLQQAEQKPSLFYKLKDIRLLYESFQEELEG 172 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVF-ICGISALPPVYLQALQALGKHI-EI 236 + +E L L V I G + PV + L+ L ++ Sbjct: 173 KYITA-------EETLEALCQVARQSAILKGCVVAIDGFTGFTPVQNKLLRELFSLAEQV 225 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 ++ T + + I+ L L + + + + Sbjct: 226 YVTVTIRAQEEFYRIRGEHELFYLSKK----TIRSLAHTAQEAGCEILPPVVMEWKTLPR 281 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 G L L +Q + + H + E Sbjct: 282 FTKSPELGFLEA----YLFGGGKAQWTEPAEEPVRSANPHTAE----------------E 321 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + + +I+ H +P +E + A+L + +DI V+V D+ Sbjct: 322 TARSGEAEPECASSGCAISLHTAANPVQEAHFAARTIRALLRQ--GYRYQDIAVIVGDLP 379 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 SYS +I VFG + Y + R S+P++E ++L + F V L Sbjct: 380 SYSSYIPQVFGEY----KIAYFMDSTRTVFSNPLVEFLRAVLDMIQQDFTCASVFRYLRT 435 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 + L L +V +G+R + L L Sbjct: 436 GLCRIDAQK----LDMLENYVLAAGVRGFSRW--REPFTRAVDFLDEEQLALCEELRSLI 489 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 ME + ++ E L+ ++ L + R Sbjct: 490 MEPLLPLVSCMRQARTTAREKTEG----------LHTLLCHYNIQQQLADMEKQFRA--- 536 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL- 655 AE E I I + +A+ L + L ++ R+ Sbjct: 537 ---DGQAELEKEFAGIYAMVIGIFDKLAELLREEALTLQEYTELLEAGFEEARVRLIPPS 593 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP---------KRGDR 706 A V + L R KV+ LG+NDG P A G ++ R Sbjct: 594 ADRVQVGDLERSRLTDIKVLIFLGLNDGWVPATGAGGGLLSDMERETLMESRVELAPTTR 653 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA 766 R+ L +++LY+S D S PS +++ + D Sbjct: 654 QNSYIQRFYLYLNLTKPRERLYLSCSKA-TADGSLLRPSYVMRTIGRLFPGLSVHDEDVC 712 Query: 767 LNCDESEARVKAHLTCLH------TRMPFDPQNYQPGERQSYAREWLPAASQAGKAH--S 818 + + L L + + + + +A + Sbjct: 713 ESFSSRVETPQNALAYLLEGFWSIRERQPSGEWLELYNWYRRKEDTKKQVQRLVEAAFLT 772 Query: 819 EFVQPLPFTLPETVP-------LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPF 870 + + + L++F + F Q L++ R E P D Sbjct: 773 FDESGIGRKAARELYGEVLVNSVSRLEKFASCAFAHFLQYGLRLQEREEYVFRPVDMGRV 832 Query: 871 ILEGLSRYQ------------INQQLLNALVEQDDAE--RLFRRFRAAGDLPYGAFGEIF 916 + Y I +++ + +E+ E + + A Sbjct: 833 FHSAIELYSRKVEESGYDWFRIPEEVRDRFIEEAVNEVSAAYGQQILHDSARNEAMIGRM 892 Query: 917 WETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQITGWLPQVQ-- 960 + + L ++ + + E+ +++ G + ++ Sbjct: 893 KRIMRRTVWALHRQIQSGHFYPANFEVSFSQAEELEAVNIALSPEEKMRLQGRIDRIDVC 952 Query: 961 -PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRF 1008 + + + + + + + Sbjct: 953 EKEEQVYVKVIDYKSGNTSFDLVALYYGLQLQLVVYLNAAMELEKKVHP 1001 >UniRef50_B1I494 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Peptococcaceae RepID=ADDB_DESAP Length = 1165 Score = 299 bits (766), Expect = 3e-79, Method: Composition-based stats. Identities = 136/1089 (12%), Positives = 267/1089 (24%), Gaps = 195/1089 (17%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIA--ANIDFPLP 65 + + + + + P + LV Q + L+ G++ Sbjct: 13 GKTRLCLEEIRKELRQAPDGPPL---VFLVPEQATFQT-EYALALTPGLSGMFRAQVLSF 68 Query: 66 ASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF 125 W +F V P + + +L L ++ +LF Sbjct: 69 RRLAWRVFSEVGGAAR------------------PHVGDVGKRMMLARILARRRNELRLF 110 Query: 126 Q-------LSSKAADLFDQYLVY--RPDWLAQWETG----HLVEGLGEAQAWQAPLWKAL 172 S A + + Y P+ L Q + L L+ Sbjct: 111 GRAAGQYGFSGTLAGVLSELKTYLVTPEALEQAVRMLPGTAETDSLQAKLEDLRLLYTDF 170 Query: 173 VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGK 232 L P + V++ G + P L+AL Sbjct: 171 ERELAGKYIDPDDYLTLLA------ARLGESPTLRAAEVWVDGFAGFTPQEYAVLEAL-- 222 Query: 233 HIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE 292 R DP + + + Sbjct: 223 -------LKAAARVNVALCLDPRSGRREDLELFQVT------------------------ 251 Query: 293 QDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAG 352 RD L++L ++ V +++ A Sbjct: 252 ---------------RDTRARLAELARKNGVELERPVELAGPPARFRAN--------PAL 288 Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 ++E + ++ S + EVE +L + + RD+ ++V Sbjct: 289 AHLEREFFRRPTKKFAGPPENLRLVAAASRRAEVEGAAREILRL-SRERGWRWRDVSLVV 347 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 ++ Y + VF +P I +R + HP++E S L + + V Sbjct: 348 RNLADYHELVATVFADY----GIPCFIDRKRPVRHHPLVELIRSALETVTENWTYDPVFR 403 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI-----DDDNVRELELPATGQHTWRFG 527 L ++ + L +V GI+ D R L + Sbjct: 404 YLKTDLVPVSRG----DVDLLENYVLAHGIKGAKWADPEDWHYRRSDALNRPVPNGTGAP 459 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 Y E + + + G + L L L +EEW Sbjct: 460 APSDRDRYLREKVNRIRRRAARHLLDFQRRVQAAGTVRELTAALYDLLSDLDVPGRIEEW 519 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 E + ++ + + +A+ L +D Sbjct: 520 SREAET------EGRLEAAREHRQLWDGVVELLDQVVETLGDEALTPEEYGRILDSGMDG 573 Query: 648 ERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP----- 701 +++ A V + +L R+ + +LG+++GV P + G ++ Sbjct: 574 LQLALIPPALDQVLVGSLERSRNPDIRAAFVLGVSEGVLPGRHGGTGLFTDREREVLLAA 633 Query: 702 ----KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 R + +++YL AL A L++SY + PS ++ L + Sbjct: 634 GLEVAPDTRRKVYEEQYLVYIALTRAGHYLWVSYPLADE-EGGALAPSSVIPRLRELFPG 692 Query: 758 SHYLPGDEALNCDESEARVK-------------AHLTCLHTRMPFDPQNYQPGERQSYAR 804 A + L + + DP + + Sbjct: 693 LREETLALEPEGTAPGADLPYVTAPGRTLGFLVTRLRDWKSGVTVDPVWWSVFNWFAAHA 752 Query: 805 EWLPAASQA---------GKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQV 855 W + + P + V + L+ F P F + L++ Sbjct: 753 GWRERCAPVLAGLFYENREPRLDPELTPELYGSRLVVSVSRLEEFRGCPFAHFARYALRL 812 Query: 856 NFRTEDS-EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL----------------F 898 R PD F L +L A +E D E Sbjct: 813 KERDVCRLAAPDIGLFFHAALK--TFEDRLREAGMEWDALESADCTRLASAVVEELAPQL 870 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL------------- 945 + + +A R ++E+ Sbjct: 871 QSEVLLSSPRLRFLTGKLERVVERTAGVMAAHARHSRFQPVAVEVAFGPGRDVPGPAYPL 930 Query: 946 -ACNGVQITGWLPQV---QPDGLLRWRPSLLSVA-------QGMQLWLEHLVYCASGGNG 994 V++ G + +V D R L+ G Sbjct: 931 PGGGSVELAGRIDRVDVAHTDNAAYLRVIDYKAGPRSLALDDVYYGLNLQLLVYLEAGLR 990 Query: 995 ESRLFLRKD 1003 E+ ++ Sbjct: 991 EAAALAGRE 999 >UniRef50_Q6MFB7 Putative exodeoxyribonuclease V gamma chain n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MFB7_PARUW Length = 1195 Score = 298 bits (763), Expect = 6e-79, Method: Composition-based stats. Identities = 242/1130 (21%), Positives = 419/1130 (37%), Gaps = 127/1130 (11%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF--GIAAN 59 L V+ SN+L +L ++ + + PF+ +++V M WL + ++Q GIAA Sbjct: 38 LEVFFSNQLSILYEQLKNNLFGFK-QTPFKKRLVIVYGPAMQTWLTLKMAQDPDLGIAAG 96 Query: 60 IDFPLPASFIWDMFVRV-LPEIPKESAFNKQ-SMSWKLMTLLPQL-----LEREDFTLLR 112 I+F + L S ++ +L+T+L E++D+ L Sbjct: 97 IEFLYLNQAFETLIHYFQLKNEKIPSILELSLAIEKELLTVLQDYHRLSDEEQQDWLTLI 156 Query: 113 HYLTDDSDK------------RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGE 160 +YL +S + ++L LS A +F +Y Y +++WE E Sbjct: 157 YYLKLNSKQVGENLKLTRKMEKRLTGLSYHLAKIFQEYGKYAYSLVSKWEK-------SE 209 Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 + WQ+ LWK+L G W +A F +TL+ C V IS + Sbjct: 210 HRGWQSRLWKSLF--GGNQGWTYWTKA-----FQKTLKFFPECE------VHFFSISFIS 256 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 Q L L I+ +PC +W DI+ L T ++ L + Sbjct: 257 KAEFQFLSKLANVAPIYYYLLSPCAVFWSDIRSDNETRYLQTYWQQKLGSKASQVLQLE- 315 Query: 281 ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSD----------LESSQELDAFVDVT 330 NPLLA++GKLGR+ Y + + L S Sbjct: 316 ----------ELLRDRNPLLANFGKLGREMAYQIEESQATTHAGYILPSHVSELNDEIFF 365 Query: 331 PDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLH 390 ++L L L + A + + + D SI H+ S +RE+++L+ Sbjct: 366 QEDLFLKESLQPLTLLHAIQADILMMRNPEGKPPFNFERKDDSIQLHIAPSIRREIQILY 425 Query: 391 DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 LL + E+D TL P DIIVM I Y P+IQ+VFG + L + I D + + Sbjct: 426 HNLLKLFEKDSTLQPNDIIVMAPQISDYVPYIQSVFG--LEESQLDFQILDLGMQAQSEI 483 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 ++ F L+ L +SR+ ++L L + +T+ +++W+ ++GIRWG D + Sbjct: 484 VQGFFQLIRLSESRWEVSELLQLFGHRLFQRCHQLTQSDYYLIQEWIQQAGIRWGEDWLH 543 Query: 511 VRELELPATGQ-----------HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 EL + + + L ++SA +P + AE Sbjct: 544 RNELLQRHHCEKEMVDSSSVGTWNFGLTRLLLGLTTVVKSADSHSFDSIPCEGIDFSQAE 603 Query: 560 LVGHLASLLMQLNIWRRGLAQERP--LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 L+ LL L L +EEW +L+ +F + E ++ E+ Sbjct: 604 LMERWIRLLHSLRDDLSPLHDRSQMCMEEWSCYLSCLLDTYFKCEFEDSQSIADYEELKS 663 Query: 618 A--IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP-VNICTLMPMRSIPFKV 674 ++ + ++ L L Q I+ R + C++MP+RSIP KV Sbjct: 664 QFKLLGDSAKTFKETKFSFQTIKFHLNNLLQQRGITYRESHLQTIRFCSMMPLRSIPAKV 723 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD-RSRRDDDRYLFLEALISAQQKLYISYIG 733 + +LGM +G +PR +LM + + D DRYLFLEAL S +SY G Sbjct: 724 IAVLGMQEGAFPRAGYHTSLNLMVGQDNLDYNPNSTDYDRYLFLEALQSVTDVFIVSYQG 783 Query: 734 RSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 + QD+ PS++++E Y+ + + + + S+ A Sbjct: 784 YTYQDSKVLQPSLIIEEFFTYLDKYYLIQNKKISEQCVSKHPFDAFDVSYFKPNSILNNY 843 Query: 794 YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET----VPLETLQRFWAHPVRAFF 849 Q R + + + L+TL PV+ + Sbjct: 844 SQFDYRIAEQYYQTHKTPSHRLLKQFILSNYSLEDILPSHTVIDLKTLNTLVRSPVKFYL 903 Query: 850 QMRLQVN-FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLP 908 L + ED I + E L L++YQ+ Q L ++ E++ + G LP Sbjct: 904 NRGLDIYLEGYEDRIIKNQEELGLSALNKYQLKQFAL-----KEPFEKVMQIADKEGKLP 958 Query: 909 YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN-------------------- 948 G F + + E+ ++ R+ + + Sbjct: 959 LGMFKTVATKRFKDEIDEVHQRLYKHGINPSEL-FQIEFCTSCSEPCQIQKDQWLLPALQ 1017 Query: 949 -------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASG----GNGESR 997 + I G LP V GL+ + + W + L++ + E Sbjct: 1018 LNYSDQYQISIIGKLPFVSKKGLVVLSQGSG-FSDAWKAWPQFLLFNYATTFNIEAIERN 1076 Query: 998 LFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLK 1047 L L K E + + ++ YL LI Y M + P+ + ++ Sbjct: 1077 LILSKSSEVKKAFF--KDSIPYLKHLINYYALSMRNFSPLFPDWIPSLIE 1124 >UniRef50_C4Z990 AddB n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z990_EUBR3 Length = 1156 Score = 298 bits (763), Expect = 7e-79, Method: Composition-based stats. Identities = 125/1071 (11%), Positives = 279/1071 (26%), Gaps = 170/1071 (15%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQM--TLSQKFGIAAN 59 L+ N + + + +E +P + +++V Q + LS+ I N Sbjct: 3 LQFITGNSGNGKTKYLFNRIVKEAKANPRDNYLVIVPEQFTMQTQRQLVDLSENKAI-MN 61 Query: 60 IDFPLPASFIWDMFVRVL-PEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 ID + +F + + K + KL E + ++ L Sbjct: 62 IDVLSFKRLAYRVFDELGITNLTVLEETGKNLVLRKLAA-----QEADKLGVIGRNLNRI 116 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQ 178 ++ L S+ QY + + +G L + L + L++A ++ Sbjct: 117 GYISEVKSLLSELV----QYNISPEELGRYIASGMLSDTLSDKLKDVLVLYEAFEKFMQD 172 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFIC-GISALPPVYLQALQAL---GKHI 234 + + L + L + V + P+ Q ++ L K I Sbjct: 173 KYITA-------EEILNVLSNVAEESAILRNSVIAFDEFTGFTPIQNQLIKKLFVISKKI 225 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 + L CR DI + +L +R Sbjct: 226 YVTLTID--CRE---DIFKSRGMQELFDMPKRTVKS------------------------ 256 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 L+++ + ++ + + EN Sbjct: 257 -------------------LTEMAAFYGIEVEEP-------IILDKNYRLAEN--EELSF 288 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 +E+ + I P++E+ + R+ ++ + L RDI ++ D Sbjct: 289 MEQQLFRKRRSSFKKAPKHIHIDCLRDPKQELTKIARRINELV-RNENLRYRDIAIVTGD 347 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 ++ Y+ +++ +F +PY I + HP +E S+ + F ++ V L Sbjct: 348 VNIYAGYVREIF----DKYNIPYFIDATQEILFHPFIEFIRSIPDIAAQNFSADAVFRFL 403 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + + L +V G+R + + G LL Sbjct: 404 RCGFTEL----SASEIDVLENYVLACGVRG------KSAWDKKWVRLPKHKAGYDIELLN 453 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 + E + V ++ + ++ + L L + Sbjct: 454 QSREYIMELLKPVYQVF------SDKKSTVKDYVLAIYKLIVLLDIPDKLAKKEQAL--- 504 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 D I + + + + + + L LD ++ Sbjct: 505 ---LDAGDQTASKEYGQIYKIVMQLFEKYVAVLGDECMDAEEFTQILDAGLDAADVAVIP 561 Query: 655 LA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR---------G 704 V I + R KV+ G+NDG+ P+ G ++ G Sbjct: 562 PGYDTVTIGDIERTRLTNIKVMFFAGVNDGIVPKAAGRGGIISQYEREALKELDIELAPG 621 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 R + R+ + ++LYISY + PS L+ L + + Sbjct: 622 AREQAFIQRFYLYLNMTKPSRELYISYTRLD-SEKKAAQPSYLIGILKGMFPELVVTETE 680 Query: 765 EAL------NCDESEARVKAHLTCLHTRM-------------------PFDPQNYQPGER 799 + + + + ++ D + + Sbjct: 681 DVEQLLDISSRQSALDYLLSNEVDDRWCEIAAAVMFYDASVSDAGDGNEVDDKAFTQKNS 740 Query: 800 QSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRT 859 + + + ++F F L++ R Sbjct: 741 VERLINARFEHYSKDPISRNVARSIY-GRHMEGSITRFEQFARCAYAHFLNYGLRLTERE 799 Query: 860 EDSEIP-DTEPFILEGLSRYQ--INQQLLNAL---------VEQDDAERLFRRFRAAGDL 907 E D E L RY ++++ + + + + + G Sbjct: 800 ESGFTSLDMGNIYHEALERYSKKLDRESTDWFSVTDAKRDELAMEAINEVIDEYAGFGIF 859 Query: 908 PYGAFGEIF---WETQCQEMQQLADRVIACRQPGQSMEIDL-------ACNGVQITGWLP 957 Q + L ++ + E V I G + Sbjct: 860 DTAESQHSISHMKAVFKQTVWALTTQIRRGSFVPERFEFSFYESLDMANDVTVDIKGRVD 919 Query: 958 QVQPDGLLR---WRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGE 1005 + + + ++ + + E Sbjct: 920 RTDTYTDEDRLFVKVLDYKSGNTVFDLVKLYYGTQLQLAVYMDAVMEQKKE 970 >UniRef50_B0KDB8 ATP-dependent helicase/deoxyribonuclease subunit B n=10 Tax=Thermoanaerobacteraceae RepID=ADDB_THEP3 Length = 1149 Score = 298 bits (762), Expect = 8e-79, Method: Composition-based stats. Identities = 124/1061 (11%), Positives = 280/1061 (26%), Gaps = 180/1061 (16%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQ-KFGIAANIDFPLPA 66 + ++ + + P ++LV + + L + Sbjct: 13 GKTYFCLREIKEKI-NDGNSHPL---ILLVPEQFTFEAEKYLLETVEKDRKMRAQVLSFK 68 Query: 67 SFIWDMFVRVLPEIPK-ESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF 125 + +F V + ++ + + +K+M L + L+ Y + + Sbjct: 69 TLANRVFTEVGGLTRQHVNSCGRSMVIYKIMEDLKE--------NLKVYYKASRQQGFIK 120 Query: 126 QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWH 185 ++S + F ++ V P+ L EGL E + ++ E HQ Sbjct: 121 KISEVITE-FKRFEVT-PEKLMDTAESIQKEGLREKLRELSLIYGKFDELLHQKYIDEED 178 Query: 186 RANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL---GKHIEIHLLFTN 242 L +E E + +I G + P + L+ L + + L Sbjct: 179 ALTLLAEKLEYSEQFK------GAEFWIDGFTGFTPKQYKVLEKLLKKAARVSVTLTMDT 232 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS 302 D D L + + LL Sbjct: 233 -----SKDSIDNTDLFYTTKK-------------------------------TEDKLLKI 256 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 + + ++ + + + +E+ S Sbjct: 257 ----------------------CYENNISYEKPVDLNEGVPKRFEKNEEMAFLEKHLFSY 294 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 + +I+ + EVE ++ ++ D L DI+V D+ Y I Sbjct: 295 PYKIYSKDTKNISLFKAVNVYSEVEETAREIIRLV-RDENLRYSDIVVTARDLKRYHKLI 353 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 + +F +P+ I + +++P++ SL + + E V L Sbjct: 354 KTIFSHY----GIPHFIDLKLDIKNNPIIVYITSLFEIYLKNWSYESVFRHLKTGFTNLN 409 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 E + +L +V +GI+ G + + + ++ A+E Sbjct: 410 K----EDISFLENYVLANGIKGGKWKEEWKY-----SFRNRLDKLFDDQDEKEALEKVNT 460 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 + + L + + +E + ++ + Sbjct: 461 IKNGISEPLNKFYKDFSNANTVREACEILYNFLVERDIPQRIENLIREFKE------NKE 514 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNI 661 E + I ++ + + + + + L L + +I A V + Sbjct: 515 FEIANQYSQIWDIVVDVLDQMVEVMGEEKINIDLFSKILDIGFEAYQIGSIPPALDEVLV 574 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR---------GDRSRRDDD 712 ++ M+S K + ++G NDG++P G + +++ ++ Sbjct: 575 TSVDRMKSHNAKALFVIGANDGIFPASSFEEGILTDEDRQILTSYEVELDRDTKAKVFEE 634 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ-----------SHYL 761 ++L AL S + L ISY + PS+++ Q + Sbjct: 635 QFLVYTALTSTSKFLRISYPIAD-HEGRSLRPSIIISRFKRIFPQITQFSNVIEMDTDEE 693 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK------ 815 + D + + + + S W + + Sbjct: 694 NLHRVSSPDPTFNEMIKSFKEWDIKDKINSLWLDVYNWYSNKEVWRKRIEKVLEGFNYSN 753 Query: 816 ---AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE-IPDTEPFI 871 + + L+++ A P F Q L+ R S PD F+ Sbjct: 754 QVRVIPSAKIKRLYKDEINFSVSRLEKYAACPFAYFVQYGLKAKERKIYSFDPPDLGIFM 813 Query: 872 LEGLSRYQINQQLLNAL---VEQDDAERLFR--------------RFRAAGDLPYGAFGE 914 L+ + L E D E Y + Sbjct: 814 HNVLNE---VSKALEKEDKTWEDLDREYCDEVVNIVVDNMLKGVSEHILKSSPRYEYLSK 870 Query: 915 IFWETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQITGWLPQVQ 960 + +++ + E+ + + G + +V Sbjct: 871 RLTRVLSNAVWVISEHIKRSSFIPSGHEVAFGENQMYPPIKIILSNGEEINLIGRIDRVD 930 Query: 961 ---PDGLLRWRPSLLSVAQGMQLW--------LEHLVYCAS 990 R L+ L+Y + Sbjct: 931 VFEKGEESYIRIIDYKSGNKELKLEDVFYGLELQLLIYLDA 971 >UniRef50_B7JDU3 ATP-dependent helicase/deoxyribonuclease subunit B n=77 Tax=Bacillus RepID=ADDB_BACC0 Length = 1171 Score = 298 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 138/1180 (11%), Positives = 308/1180 (26%), Gaps = 204/1180 (17%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTL-SQKFGIAANIDFPLP 65 S + + ++ +++ E + LV Q Q + S+ + Sbjct: 12 SGKSTLCLHEVQEELKQRPRG---ETILYLVPEQMTFQTQQALIGSEDVRGSIRAQVFSF 68 Query: 66 ASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF 125 + W + V + E LLR + D +F Sbjct: 69 SRLAWKVLQEVGGASRL------------------HIDEAGVHMLLRKIVESRKDGLSVF 110 Query: 126 QLS-----------SKAADLFDQYLVYRPDWLAQWETGHLVEG------LGEAQAWQAPL 168 Q + S A+ F +Y V + W+ L L Sbjct: 111 QKAAEQNGFFEHLGSMIAE-FKRYNVTPSNVYEMWQQLDAHSSSAEQKLLANKVYDLQLL 169 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQ 228 + + +++ L LP ++ G VY+ Sbjct: 170 YDDFERALIGKYLDS-------EDYLQLL------VEKLPQSEYVKG----AEVYIDGFH 212 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 + + C R + N LF Sbjct: 213 SFSPQELEIVRQLMICGA------------------RVTITLTIDEKTLAQPVNELDLFY 254 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR 348 + + ++++ I+ I +E Sbjct: 255 ETTLT-----------------YEKIKQVAREEKIE-------------IEKTIPLMEQP 284 Query: 349 AVAGVNIEEFSRSDNKRPLDP--LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 + RP + ++S+T H + + EVE + + ++ + R Sbjct: 285 RFHSPALAHLEMHYEARPNEKFHGEASVTIHTAANLRAEVEGVAREIRRLVA-EENYRYR 343 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 DI V++ + +SY ++ +F +P+ I ++R HP++E S L + + Sbjct: 344 DIAVLLRNGESYYDVMRTLFTDY----NIPHFIDEKRPMSHHPLVECIRSALEIISGNWR 399 Query: 467 SEDVLALLDVPVLAA---RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 + V + +L R + E + + G++ G + Sbjct: 400 YDAVFRCVKTELLYPLDVRKETMREEMDEFENYCLAYGVQ-GKRWTSEDPWMYRRYRSLD 458 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 G+ E V + G + + + ++ L + Sbjct: 459 DTNGMITDSEREMEEKINRLRDVVRTPVIRMQKRLKRAGTVMQMCEAVYLFLEELDVPKK 518 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 LE + + F D E + ++ +++ + + + LS+ D ++ Sbjct: 519 LEALRIRAEESGDFLFATDHEQ------VWEEVMSLLDTFVEMLGEEKMSLSMFTDVMST 572 Query: 644 RLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK-- 700 L+ + + + V I + R K ++G+N+GV P G ++ Sbjct: 573 GLEALQFANIPPSLDQVLIANIDRSRLSNVKATFVIGVNEGVIPAAPMDEGMLSDEERDV 632 Query: 701 -------PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 R +++++ + + A +KLYIS + S ++++ Sbjct: 633 LSAAGIELAPTTRQTLLEEQFVMYQMVTRATEKLYISCPLADE-EGKTLLASSFIKKIKR 691 Query: 754 YIGQ-------------SHYLPGDEALNCDESEARVKAHLTCLHT---------RMPFDP 791 S + + + V L Sbjct: 692 MFPDVIDTFITNDVNDLSRSEQISYVATPEVTLSYVMQQLQTWKRYGFEGNLDFWWDVYN 751 Query: 792 QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP--LETLQRFWAHPVRAFF 849 E + + L + +A + + + ++ F F Sbjct: 752 FYVTSDEWKQKSSRVLSSLFYRNRAQKLSTAVSRDLYGDKIKGSVSRMELFNRCAYAHFA 811 Query: 850 QMRLQVNFRTEDS-EIPDTEPFILEGLSRYQINQQLLNALVEQDDA-------------- 894 Q L + R + PD L R I +LL D Sbjct: 812 QHGLSLRERDIFKLDAPDIGELFHAALKR--IADRLLRENRTWADLSIKECEHLSAVVIE 869 Query: 895 --ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG--- 949 L +R + + + + L + + +E+ G Sbjct: 870 EIAPLLQRQILLSSNRHFYLKQKLQQIIFRTSIILREHAKSSGFVPVDLEVPFGMGGTGS 929 Query: 950 -------------VQITGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN 993 +++ G + +V + R + E A Sbjct: 930 LPPMEFSLPNGVKMEVVGRIDRVDKAEDENGTFLRIIDYKSSSKALDLTEVYYGLALQML 989 Query: 994 GESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDA- 1052 + W A A Y + + V ++ A ++ Sbjct: 990 TYLDVVTSNAHTWMKKGGTASPAGV-------LYFHIHNPIVEVKGDASEAEIEKEILKK 1042 Query: 1053 -QNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQ 1091 + ++ D+ + + L +++ G D + Sbjct: 1043 FKMKGLVLGDADVVRLMDNKLSTGSSDIISAGLKKDGSFS 1082 >UniRef50_A4J4E2 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Desulfotomaculum reducens MI-1 RepID=ADDB_DESRM Length = 1155 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 149/1131 (13%), Positives = 305/1131 (26%), Gaps = 207/1131 (18%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI--DFPL 64 S + + + + + + ++LV Q+ + L+ + I Sbjct: 12 SGKSHSCLEEVRQRLRQNQGES---SIILLVPEQATFQY-EYMLATTPELKGMIWAQVLS 67 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 + + + + + +LR L + K+ Sbjct: 68 FRRLAFRVLQEMGGAARA------------------HIDDLGKKMVLRRILEQRKSELKV 109 Query: 125 F-------QLSSKAADLFDQYLVYR--PDWLA---QWETGHLVEGLGEAQAWQAPLWKAL 172 F + A + +YR P L Q + + A + L+ L Sbjct: 110 FHRAAKQPGFADSLASALSELKLYRIEPQELQKGIQHMQEAPGSAIRDKLADLSLLYNDL 169 Query: 173 VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGK 232 E+ NL + + + + +FI G + P Sbjct: 170 EEFLSGRFTDPDDYLNLLAQRLPGSRTVQ------GAEIFIDGFTGFTPQE--------- 214 Query: 233 HIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE 292 + I + R + DP YL + Sbjct: 215 YGVIEQMLGTADRVHVALCFDPMYLQEPCDE----------------------------- 245 Query: 293 QDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL---ELENRA 349 L + E + L +++ I+ E R Sbjct: 246 ---------------------LEFFYPTVETYHTLLDMAGALRISLEPPIICGKETPVRF 284 Query: 350 VAGVNIEEFSRSDNKRPLDPLD--SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 I + + PL D ++ C + + EVE ++ + E+ L+ RD Sbjct: 285 QKDSAIAHLEKYYFRHPLQASDAAQGVSLVACANRRAEVEAAAREIIRLCREEE-LSWRD 343 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 I+V++ D+ +YS I +F +P I ++R HP++E S L + + Sbjct: 344 IVVVLRDLTNYSDLINTIFND----HGIPVFIDEKRNVLHHPLVELIRSALEVITQHWAY 399 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 + V L ++ + + + L +V GIR +DN Sbjct: 400 DPVFRYLKTDLIPVQR----DDVDRLENYVLAHGIRGNRWNDNRDWTYRRQYTLGEDCDI 455 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 + + + + + G++ + L L+ +E W Sbjct: 456 DDN--EAEQLAQLNVVRYAAIEHINNFSKKVANCGNVRQITTALFELLESLSVAERMEAW 513 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 I ++ E + A + L L L+ Sbjct: 514 AKEAE------VAGRLIEAKEHAQIWDNVILLLDEIVEAMGEQELNLEEYLQVLEAGLES 567 Query: 648 ERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR--- 703 ++ V + TL R+ K +LG++DGV P + G ++ Sbjct: 568 LKLGLIPPGLDQVVVGTLERSRNPNVKAALVLGISDGVLPARPVEEGLFSDYEREALREI 627 Query: 704 ------GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 G R + D++YL AL A +L++SY + PS ++Q + + + Sbjct: 628 GLNLAPGARRKLFDEQYLIYTALTRASSRLWLSYPQADD-EGKALMPSPVIQRVKELLPL 686 Query: 758 SHYLPGDEALN-----------CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW 806 S + + A L DP ++ Sbjct: 687 IQEEILPVEPPCLGGDLAFIANPSRSLSYLAAMLRETVAGRLVDPVWQDVYSWFVQQPQY 746 Query: 807 -------LPAASQAGKAHSEFVQPLPFTLPETVP--LETLQRFWAHPVRAFFQMRLQVNF 857 L + S + + L+RF P F L++ Sbjct: 747 QESCRRVLAGLYHVNQETSLPPSMGRRLYGSRLRASVSRLERFTTCPFSHFLSHGLKLKE 806 Query: 858 RTEDS-EIPDTEPFILEGLSRYQINQQLLNALV-----------EQDDAERLFRRFRAAG 905 R++ PD F L + + L+ + E L + + Sbjct: 807 RSQFKLAAPDLGQFFHAALKLFAERIKALSLDWGQLSRGQIITITGEIVEELAPQLQNEI 866 Query: 906 DL---PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN-------------- 948 L + + T + + LA+ ++EI N Sbjct: 867 LLSTARHRYLIKKLRRTLERAVVTLAEHARRGSFRPVAVEIGFGDNAELPAVQLDLADHC 926 Query: 949 GVQITGWLPQVQPDGLL---RWRPSLLSVA---------------------QGMQLWLEH 984 +++ G + ++ + + + Sbjct: 927 QMEMAGRIDRIDSACEGGQHYYSLIDYKSGQPDIKLADIVHGLKLQLLTYLDVALRYSKQ 986 Query: 985 LVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPL 1035 L + +R P+ E+A L + ++ ++ PL Sbjct: 987 LTQQEALPAAMLYFSVRDPFVASTGPMTEEEAEKNLLKQLKMKGLLLADPL 1037 >UniRef50_C6CTT5 ATP-dependent nuclease subunit B n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTT5_PAESJ Length = 1175 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 132/1084 (12%), Positives = 276/1084 (25%), Gaps = 161/1084 (14%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDF--PLP 65 + + ++ E P ++LV Q + L + ++ I Sbjct: 13 GKTTYCLDAIRAKLQGEPDGAPL---IMLVPEQATFQT-EYALLKDTSLSGTIRAQALSF 68 Query: 66 ASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF 125 + + T L + + +L + + +LF Sbjct: 69 RRLAFRVMQETGG------------------TALIPISDNGKHMMLFKIIHRLGKQLELF 110 Query: 126 Q-------LSSKAADLFDQYLVYRPD---WLAQWETGHLVEGLGEAQAWQAPLWKALVEY 175 Q + +L ++ Y D + + L ++ L + Sbjct: 111 QSGAEQPGFIERLGELLTEWKRYGIDANLLKEKTASVEDSTLLDRKLHDLRLVYDKLEQE 170 Query: 176 THQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIE 235 L + + P + ++I G P AL L Sbjct: 171 LLGLYIDSED------YLTQLIAGYAYAPAMQGAHLWIDGFHGFTPKEYDALGTLIASSA 224 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 + R Y T + + L + + Sbjct: 225 EVTVALTLDRPYDNGEMPHELELFHPTAETYGKLSALAAQAGVSVYDTVVLGEGAPTRFL 284 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 G +L +++ + Sbjct: 285 G-----------------------------------STMLAHLEKHYGGRTPMLI----- 304 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 +D ++ H + + EVE ++ + L RD+ VMV + Sbjct: 305 ----PDKKMLAVDSPACGLSLHASANRRAEVEAAARDMVRR-AREEGLRWRDMAVMVRNA 359 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 Y+ +IQ +F +PY + + HP++E S L + E V + Sbjct: 360 AEYTDYIQTIFDDY----EIPYFLDQKNNTVHHPLVEFIRSALETVLHGWHYEAVFRCIK 415 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 +L L + + G + + Sbjct: 416 TELLFPIDGSMSRELFDRLENYVLAAGVDGWKWLDRSRWKPFMQQSLEDEPDTVSEPSAK 475 Query: 536 AMESAQGE---WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 A Q ++++P + ++ + L LE W Sbjct: 476 AKREFQAIMAAREAIVPPLRRFEQSLKKASNVKDMCEALYKLLDHADAADRLERWSRE-- 533 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 + + + ++ + + + +P L + L+ +++ Sbjct: 534 ----DSASGRTQRARSHRQLWDGVMQLLDQLVEMVGDEDMPPELFAGMVETGLENLKLAA 589 Query: 653 RFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD------ 705 A I ++ RS K+ +LG NDGV P ++ G ++ + + Sbjct: 590 VPPALDQALIGSMDRTRSGDVKICYVLGANDGVMPMRIQEDGVLTEQERERLAEEGLVMA 649 Query: 706 ---RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 R R D+R+L AL +A Q L+IS+ + PS +++++ Sbjct: 650 PGVRRRLLDERFLIYNALTTASQHLWISWAQADE-EGKTLLPSEVIRQVRQLFPGIPVYQ 708 Query: 763 GDEALN--------------CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP 808 + A + L P + + EW Sbjct: 709 KAGEPTPGMETGDQRSYIEHPQRTLAYLITELRAWRQGSEIAPFWWDVYNWFAIRPEWQD 768 Query: 809 AASQAGK--AHSEFVQPLPFTLPETVP-------LETLQRFWAHPVRAFFQMRLQVNFRT 859 + S L T E + + ++RF + P + F L++ R Sbjct: 769 KLQLMNASLSFSNQETVLTTTTAEQLYGTKLKASVSRMERFVSCPFQHFAIHGLRLRERQ 828 Query: 860 EDS-EIPDTEPFILEGLSR---------YQINQQLLNALVEQDDAERL--FRRFRAAGDL 907 E PD LSR + + + + E + Sbjct: 829 MYRLEAPDVGQLFHAALSRLAGGVGQRWGSMPEAQIREAAAKAVDELAPRLQSQILLSSG 888 Query: 908 PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQIT 953 + E Q L++ + +E+D ++I Sbjct: 889 RFQYIARKLKEIVAQAAVILSEHSRRAQFQPVGLEVDFGPDGTLPSLVIPLDNGGTMEII 948 Query: 954 GWLPQVQP---DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPP 1010 G + +V + L R + E + + + EW P Sbjct: 949 GRIDRVDAAETEEGLLLRVLDYKSSATQLKLEEVAFGLSLQMLTYLDVLVTHASEWLGKP 1008 Query: 1011 LAAE 1014 + Sbjct: 1009 ASPA 1012 >UniRef50_Q8ERW6 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Oceanobacillus iheyensis RepID=ADDB_OCEIH Length = 1166 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 134/1088 (12%), Positives = 297/1088 (27%), Gaps = 191/1088 (17%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLS----QKFGIAANIDFP 63 N+ +V+ ++ + + +V Q ++ + + Sbjct: 13 NKSEVILKEIKQKISTNPIGP---SIFYIVPDQMTFQ---QEVALFSDSETNGSIRAQIV 66 Query: 64 LPASFIWDMFVRVLPEIPK-ESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKR 122 + W + + S+ Q M K++ ++ D+ + L + Sbjct: 67 SFSRLAWRVLQETGGGTKQFISSVGIQMMLRKIIEE-----KQGDWNAFQKAL---KKQG 118 Query: 123 KLFQLSSKAADLFDQYLVYRPDWLAQWE-------TGHLVEGLGEAQAWQAPLWKALVEY 175 L QL + +L +Y + D Q +GL + +++ + Sbjct: 119 FLGQLETMLTEL-KRYEITPDDLRMQQSHLTDFVHQSPSEQGLTRKLSDLIYIYETFIYA 177 Query: 176 THQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIE 235 + L + I+ ++I G + P L L K Sbjct: 178 LQGTYVDSEDQLQLLIQQIKQSSILNNAD------IYIDGFHSFTPQEQSVLTELMKTSN 231 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 + + ++ Sbjct: 232 --------------------------------------SITVALTLDDPWKEDASELDLF 253 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 P ++L L + + +L ++ + A Sbjct: 254 YQPSQT---------YHVLKQLAWEAGVPVEDPI----ILDTLEGNFQNRPYFA-----H 295 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 E P + I P+ EVE + ++L ++ ++ RDI +++ Sbjct: 296 MEKYFDSRPAPAYEGEVPIEIFEAVHPRAEVEGIAQQVLELIRDNR-YRYRDIALLIRQP 354 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 + Y I+ +F LP I ++R HP++E S+L + + ++ + +L Sbjct: 355 EVYHDLIETIFNDY----ELPVFIDEKRPMLHHPLIELIRSILEVVQGNWRNDAIFRVLK 410 Query: 476 VPVLA---ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG--QHTWRFGLTR 530 ++ F +T + + L +V E GIR + + + + R Sbjct: 411 TGLIPSADDEFPLTMDSIDQLENYVIEFGIRSRHQWIGENKWKYQRFRGFDSSAQTDRER 470 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 L ++ DE + L + + W L LE Sbjct: 471 ELQESMNRYRDQVISAIATVDE----QLRAATTVKDLCIAMYQWLEELKIPDQLEVTRKY 526 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 D E + + E + + + LS+ + L ++ + Sbjct: 527 YDD------QGLPEKGREQEQVWDAVIQLFDEMVEIAGEEKMDLSVFQVALDAGIETLQF 580 Query: 651 SQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG----- 704 S + + + T+ R + LLG+N+G++P + G +++ Sbjct: 581 SHVPPSMDHIIVGTIDRSRMSNIRCAFLLGVNEGIWPMKPTSDGMIDEAERLLLEQNGLK 640 Query: 705 ----DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 + DD + A A+ +L ISY S ++ + PS L+ + + + Sbjct: 641 LADTSERQLLDDWFYMYLAFTVAKDRLKISY-LLSDEEGKAKMPSQLIHRVEELFPATKN 699 Query: 761 LPGDEALNCDE-----------SEARVKAHLTCLHTRMPFDPQNYQPGERQSYA------ 803 + + S + + A L P DP ++ + Sbjct: 700 HILLQDPEDESNTRRFVSTELKSRSALTAQLAKFKKGYPIDPIWWEVYQWYVEHHPQGGT 759 Query: 804 -REWLPAASQAGKAHSEFVQPLPFTLPETVP--LETLQRFWAHPVRAFFQMRLQVNFRTE 860 L K S + P+ + + L+ ++ + F + L + R Sbjct: 760 THRVLQGLHYENKPESLQKDTVEQLYPKRIQASVSRLETYYRCSYQHFAKYSLNLEERRT 819 Query: 861 DSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE------------------------R 896 L+ Q+ + L + E AE Sbjct: 820 YK---------LDAPDIGQLFHEALKKITEWIHAEGNDFSALTKSQSSHYANRAVTELSP 870 Query: 897 LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN-------- 948 + + Y + E + L ++ +E+ Sbjct: 871 VLQHQILHSSNRYAYIQKKLEEVIARATFVLGEQARLSHFSPVGLELGFGDGNNQIPSLS 930 Query: 949 -------GVQITGWLPQVQP---DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL 998 + + G + +V + L R + E A + Sbjct: 931 MLLENGYELVLRGRIDRVDKAELENNLYLRIIDYKSSSKGLDLTEVYYGIALQMLAYLDV 990 Query: 999 FLRKDGEW 1006 L +W Sbjct: 991 VLTHSEKW 998 >UniRef50_D0LXX8 Exodeoxyribonuclease V n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LXX8_HALO1 Length = 1274 Score = 292 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 220/1099 (20%), Positives = 375/1099 (34%), Gaps = 119/1099 (10%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPF---EPEMILVQSTGMAQWLQMTLSQKFGIA 57 MLR+ +SN + L + + ER I+V + + ++++ ++ + G+A Sbjct: 1 MLRLTYSNHFEELCRALCQELAAERRRRRQLLPATAHIVVPNHHITAYVKLAVANQLGVA 60 Query: 58 ANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQ--LLEREDFTLLRHYL 115 AN+DF +SFI + V E + + L+++L LL ++ + YL Sbjct: 61 ANLDFRFISSFIAEC---VPDERRDLRVLDTPHLHALLLSVLADEALLAEDELAPVAAYL 117 Query: 116 -----TDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLG--EAQAWQAPL 168 D+ + FQL+ + A LF Y + R D L W G + + WQ L Sbjct: 118 GAAGGEQDAVDLRRFQLAQQLATLFSDYRLSRGDLLRAWREGPALGDTRSAATEIWQRRL 177 Query: 169 WKALVEYTHQLGQPRWHRANLYQ-RFIETLESATTCPPGLPSRVFICGISALPPVYLQAL 227 W A+ + L ++ E + +P V + G S LP + + L Sbjct: 178 WLAIFDAERGLLARIREETGVHWVHGPELFDEYLIKDLAVPRSVHLIGFSYLPWAHHKVL 237 Query: 228 QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF 287 + L + I +H+ NPC +W D++ + +L RQ + D F D ++ Sbjct: 238 ERLSRFISVHVYAFNPCMEFWEDLRA-GWETRLAGRQLKSRKGDAVQLSFEDLDDT---- 292 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV------------------ 329 P L WG+ GR+ + +L + FVD Sbjct: 293 ----------PALRLWGRPGRENVRILDEQTQCDFDARFVDPAAPEAEDAAAADAADAAS 342 Query: 330 -----------------------TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRP 366 P +LL +Q DIL AG + Sbjct: 343 SAESQAAAPDLFAGLGLGAAAAEPPVSLLAALQRDILFRHPARRAGA--------PDAPA 394 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS--YSPFIQA 424 L D S+ C S QRE+E++ + + +++ DP L DI ++V D Y + Sbjct: 395 LVAGDRSVQILGCPSIQRELEIIGNEIWSLMARDPGLRFNDIALLVGRADQELYQAHVPG 454 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 VF +PY +D ++EA LL LP RF ++L LL P + AR Sbjct: 455 VFAEL---HGIPYHFADAAVTGESRMVEALGLLLDLPFGRFTRPELLRLLTHPAVLAR-- 509 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 + W GI G D + W+ G+ R+ LG M + Sbjct: 510 YPDVDPDDWVHWSERLGIVHGADTRDHAA-TYIERDLFNWQQGIRRLALGAFMAGERSGE 568 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQ--------LNIWRRGLAQERPLEEWLPVCRDMLN 596 D S+ L EL L + + R E+PL W M++ Sbjct: 569 LRPFAMDGSAYLPEELPADLLPSAARFALVARSLIADARYCQQAEKPLARWRIFFDLMVD 628 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL- 655 ++ P + + + +AI G V + + L RL + R + L Sbjct: 629 SYLAPQNDEDER--NLAACREAIATLAGSDIDGRPVRYRIACELLRARLGKLRGERGELL 686 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 A V + L+PMR IP++VV L G+ +G +P DL + K +RGD S R+ DRYL Sbjct: 687 AHGVTVAPLLPMRPIPYRVVFLAGLGEGHFPASERESPLDLRAAKRRRGDVSPRERDRYL 746 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 FLE L+SA+++LY+SY+ R + PS +V EL + + G+ Sbjct: 747 FLETLLSARERLYLSYVSRDERTGETLQPSPVVLELDHLVRSGYTGEGEGTS-------- 798 Query: 776 VKAHLTCLHTRMPFDPQNY-QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPL 834 + H +DP+ + + + +A+ A + L Sbjct: 799 ----IAIDHPLRRYDPRYFPALFATIGKSDDRSKSAAPAPTPAATATISDADADAAAGYL 854 Query: 835 ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE------GLSRYQINQQLLNAL 888 + L+ R +P R ++ L A Sbjct: 855 SVAPAARRQAHVLALRRHLEHTLREHGHGMPSVGELRHALSGPRHAALRERLGWTALEAA 914 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN 948 L P + + +++ + + + + Sbjct: 915 TAPPPRVELAASPTNENREPGDGAADEVVPISLRMLRRFLETPLQAWAAAVLRLRESELD 974 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL-FLRKDGEWR 1007 P + S + L + Sbjct: 975 DPVAQADESFSTPVAPMVGLLSDVFGEHLSAGAPSLEALSERYAERAQYLELTGRSPTGV 1034 Query: 1008 FPPLAAEQALHYLSQLIEG 1026 F + +E+ L L + Sbjct: 1035 FSDIDSERHLAILQRWQAH 1053 Score = 43.4 bits (100), Expect = 0.056, Method: Composition-based stats. Identities = 41/329 (12%), Positives = 82/329 (24%), Gaps = 56/329 (17%) Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 V L ++ + G + E + + + A Sbjct: 866 VLALRRHLEHTLREHGHGMPSVGELRHALSGP-----RHAALRERLGWTALEAATAPPPR 920 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-D 866 + + + + L L+RF P++A+ L++ D + Sbjct: 921 VELAASPTNENREPGDGAADEVVPISLRMLRRFLETPLQAWAAAVLRLRESELDDPVAQA 980 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDA---------ERLFRRFRAAGDLPYGAFGEIFW 917 E F + + + + G P G F +I Sbjct: 981 DESFSTPVAPMVGLLSDVFGEHLSAGAPSLEALSERYAERAQYLELTGRSPTGVFSDIDS 1040 Query: 918 ETQCQEMQQLADRVIACRQPGQSMEIDLACNG---------------------------- 949 E +Q+ + + L+ Sbjct: 1041 ERHLAILQRWQAHIETLAPGPREPASVLSFGRAPETRDAGLLLPPLALPISLPDGEGGQR 1100 Query: 950 ---VQITGWLPQVQPDGLLRWRPSLL----SVAQGMQLWLEHLVYCASGGNGESRLFLR- 1001 V++ G V D L + ++ +L+H V A+ + L Sbjct: 1101 VVRVELVGSTSPVFADPALGAVVTSYTDKERPRDRIRGFLDHAVAIAAECEDAAARTLSV 1160 Query: 1002 -----KDGEWRFPPLAAEQALHYLSQLIE 1025 G + P +A A YLS+L+ Sbjct: 1161 VTSGKHCGRYALAPWSAVDARAYLSELVR 1189 >UniRef50_Q18AP0 ATP-dependent helicase/deoxyribonuclease subunit B n=9 Tax=Clostridium RepID=ADDB_CLOD6 Length = 1155 Score = 291 bits (745), Expect = 8e-77, Method: Composition-based stats. Identities = 130/1080 (12%), Positives = 293/1080 (27%), Gaps = 187/1080 (17%) Query: 16 LMEFIVERERLDDPFEPEMILVQSTGMAQWL----QMTLSQKFGIAANIDFPLPASFIWD 71 + +++E + ++LV + ++ L ++ + + Sbjct: 17 YILDEIKKEAQKNETTSIILLVPEQYTFEAENRVSKLFLGKEKDKYLRVRVLSFKTLSNI 76 Query: 72 MFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF------ 125 +F +V + ++ + D S++ +F Sbjct: 77 VFSQVGGLTDV------------------NINSSGKAMMVYRAIEDVSEELNVFSKSKSQ 118 Query: 126 -QLSSKAADLFDQYLVY--RPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQP 182 S D+ + Y P+ L E L + ++ + H+ Sbjct: 119 SGFVSSITDMISEMKQYNISPEMLENISGELDNETLSLKLKDISKIYNSFEGKLHENYVD 178 Query: 183 RWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA-LGKHIEIHLLFT 241 IE + V+I + P +++ L K +++ T Sbjct: 179 AQDMLTSLTSKIELSSYLD------GACVYIDEFTGFTPNQYNVIKSILNKSKSVNISLT 232 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA 301 Y G K + +R + + +L + Q+ + G Sbjct: 233 VDDINYIGYSKSD-----MFSRTKFTYSKLTQLCNEEGIKILPQVNLNTGV--------- 278 Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 + F V L + Sbjct: 279 ---------------------IKRFEKVKELQHLERFYNAY------------------- 298 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 + +I ++ EVE + ++ ++ D + RDI + D++ Y Sbjct: 299 -PYKIYSNPTENIKIKEFNNLYSEVEEIAREIVHLV-RDKNVRYRDITIATRDLNRYDFL 356 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 + ++F +P I +R +S+P++ IS L + + R+ E + L ++ Sbjct: 357 VHSIFNEY----NIPNFIDKKREAKSNPIVILIISALEMKNRRYGYETMFRYLKSGLIG- 411 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 I + + L +V +GI+ D + G E Sbjct: 412 ---IDNDDINLLENYVLANGIKGKKWFDEKWD-----YRITQSLSGQESEFELELKEKIN 463 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 VL + + + + + +E + +D Sbjct: 464 EIKNRVLEPIVILQEKLRGKNRVKEICRYIYEFLLDINMPETIESLIVNFKD------KG 517 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVN 660 + + + + I+ + + + + L + D+ + + V Sbjct: 518 ELDVANQYSQVWDIVVDILDQMVELMGDEIISLEKFIKLITLGFDEYELGLVPPSIDQVL 577 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR---------SRRDD 711 + ++ M++ K + L+G DGV+P G + + G++ +R + Sbjct: 578 VSSVDRMKNPDTKYLYLVGTTDGVFPLITKDSGILSDNDRESLGNKGIEVDIDSKTRSFE 637 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG--------------- 756 +++L +AL S + L I+Y S + PS+++ L Sbjct: 638 EQFLVYKALTSTSKNLTITYP-ISDHEGKTLRPSIIISRLKKIFPNIENKSYLVEENKNT 696 Query: 757 --QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG 814 ++ +E +K + + + + + + Sbjct: 697 DKDILKKITVKSPTFNELINVIKNYDSDGYNTEEINSIWLDIYRYYLKDEIYSSITKKVI 756 Query: 815 KAHSEFVQPLPFTLPE--------TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE-IP 865 K S Q + ++ + L+++ P F Q L+ R E S P Sbjct: 757 KGLSYTNQVHKIEEKKIRSLYKSNSLSISRLEKYAECPFAYFIQYGLKAKKRKEYSFTPP 816 Query: 866 DTEPFILEGLSRYQINQQLLNALVEQDDAER----------------LFRRFRAAGDLPY 909 D FI L R+ ++LL + D + + Y Sbjct: 817 DLGTFIHNILDRFS--KELLQDNLTWRDIDEKYIELKIGIIVDEIILKIPGYILNSSERY 874 Query: 910 GAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG--------------VQITGW 955 + ++ ++ E+ NG V + G Sbjct: 875 KYLAYRLKNMLTTAITIISQQIKQGSFEPIDYEVKFGDNGKYPPIKMVLENGQEVSLIGQ 934 Query: 956 LPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFL--RKDGEWRFPP 1010 + +V R E L KD + P Sbjct: 935 IDRVDEFEEGENKYIRIIDYKSGNKSISLTEIYYGLQLQLLVYLDAILESAKDEDMNINP 994 >UniRef50_A8VW70 Beta-lactamase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VW70_9BACI Length = 1157 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 124/1078 (11%), Positives = 285/1078 (26%), Gaps = 178/1078 (16%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPA 66 S + LE + ++ P + LV Q + L + I + Sbjct: 12 SGKSKYLEDVFIDEEMKDPSGPPL---LYLVPDQMTFQAEKRFLKRLGKGTTRIRVTGFS 68 Query: 67 SFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQ 126 + L L + LLR D + ++F+ Sbjct: 69 RLAHMIIQEQGGGA------------------LVHLKQTGVNMLLRKITEDHKSEFRVFE 110 Query: 127 LSSKAADLFD----------QYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYT 176 ++ A D +Y D A E L GL + + + + E T Sbjct: 111 HATGTAGFIDKLESMITECKRYNQSAEDIEAMAEDESLPVGLKDKLYDLSLIMNKISEQT 170 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 + +L IE ++ + + + + G P+ L L + Sbjct: 171 ASVRLASEDDFSL---AIEQVKYSEMLKEAM---IAVDGYHHFSPLEEAFLHELMTSSKQ 224 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 ++ L L + +L D + Sbjct: 225 VIM---------------------------------ALTLDKLPSADEELDPFDLFFETA 251 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 N + + ++L ++ + E + Sbjct: 252 NTAQRTL-------------------------IAANHLQIGLKPAVHFEERTRFQKKGLR 286 Query: 357 EFSRSDNKRPLDPLDS--SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 N+RP DP D + + + E+ + + ++ + +D V+ + Sbjct: 287 HLEAMSNQRPADPSDDHSGVNIVAAVNKRAEIRFIAREIRRLVRQ-ENYRYKDFAVLSRN 345 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 D Y I+ +F +P + +R+ HP++E SLL + + +DV+ L Sbjct: 346 PDDYRDLIEHIFEEE----QIPVFVDAKRSAIHHPLIEFVRSLLDIVSKNWRYDDVIRCL 401 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + + + + G + + + G + Sbjct: 402 KTELTFPIDQSVTREHLDTFENITLALGLNGYQWYDYEQWNKRLQFYRAAKEGEEDHTIT 461 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 + + ++ + + + S++ L L+ L + Sbjct: 462 LMHDLHKIMVDPLIQFHDKITSQ----NTVNSIIEALFNLLVALSVPEKLASFRD----- 512 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 A + I ++ +I + A D + + L L+ S Sbjct: 513 -QALDKGRLQEARDHDQIWKELISIFDQASEACGQDKMNPITFNNMLDTGLESISYSIIP 571 Query: 655 LA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK---------PKRG 704 A V ++ R L+G NDGV P F ++ Sbjct: 572 PALDQVVAASMATSRLSDISCTFLIGANDGVIPMPAEESAFMSDRERVTLLESGHELAPA 631 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 + +++YL +A S + +L ISY+ + + PS+++ + + Sbjct: 632 AERQLLNEQYLVYQAQTSPKDRLIISYLLSDD-EGKAKQPSIILNHVKEMFPALKTEIAV 690 Query: 765 EAL--------------NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 E+ + + +++ + L P + R + P Sbjct: 691 ESPADLDISDEDDYFISSPEGTQSFLTERLQRWKRGYPLPDIWWSVYNWYMSERTYAPTV 750 Query: 811 SQA---------GKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 + + S+ + T + L+++++ + F L++ R Sbjct: 751 RTSLTSLFYDNNPGSLSKTAARGLYGQKMTASVSRLEQYYSCAFKQFANYGLRLREREYF 810 Query: 862 S-EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFR--------------AAGD 906 + PD + L N + + RR + Sbjct: 811 RLDAPDIGILFHDALKELTANLKQEGRSFTELSEPEAVRRSKNIVENLAPKINRNILKSS 870 Query: 907 LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG--------------VQI 952 + + L ++ +++E+ V++ Sbjct: 871 FRLRYILSKLEQVVIRAAMILMEQAKRTGFQPEAVELGFGTGSDLPPLSYTLDDGTTVEL 930 Query: 953 TGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWR 1007 G + +V R ++ + A ++ + Sbjct: 931 AGRIDRVDSANTPEGFYIRVIDYKSSKTDLSLSDVYYGLAMQMLVYLDAIMKNAAYFS 988 >UniRef50_B8I2Y3 ATP-dependent helicase/deoxyribonuclease subunit B n=5 Tax=Clostridium RepID=ADDB_CLOCE Length = 1149 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 116/1071 (10%), Positives = 267/1071 (24%), Gaps = 174/1071 (16%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTL-SQKFGIAANI 60 L+ + ++ ++ D + +++V Q + + G Sbjct: 3 LQFIYGRAGSGKSFHCLNSIKTKQNKDSNKKLVLIVPEQYTLQAERDLIKVLGTGGILKT 62 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 + + + V P + ++ L D Sbjct: 63 EVLSFRRMAYRVLNEVGGITY------------------PHIHPSGKNMIIYRILERLKD 104 Query: 121 KRKLF-------QLSSKAADLFDQYLVY--RPDWLAQWETGHLVEG-LGEAQAWQAPLWK 170 + +F + + L + Y R + + G + L ++ Sbjct: 105 QFTIFHKSANCKGFVNTLSTLITELKRYNVRAESFDEVLQGLADDNYLSHKLKEIKLIYS 164 Query: 171 ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL 230 + L LE S ++I G + P ++ + L Sbjct: 165 EFDSMLVDRYRDTDDELTL---LSSKLEGTEIYA---KSEIWIDGFAGFTPQEVEVISKL 218 Query: 231 GKHI-EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 + +H+ DI A L ++ +S L Sbjct: 219 IQQAENVHITM-------CTDILFDDVQADLTDVFAAVKKSCKKFVSIAESYGVKILPPV 271 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA 349 P L F D L + Sbjct: 272 CLNT----PNL-----------------------PRFKDSRELQSLETNYCSYSYRAYQL 304 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 I + E+E ++ D + +DI Sbjct: 305 PTQD--------------------IELFESVNIYTEIEECARDIIKQ-CRDNGMQFKDIT 343 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 V ++ Y I +F +P I + +HP++ +S+L + + E Sbjct: 344 VATRNLTGYENLIGVIFEQY----NIPCFIDSKTEITNHPLVRMVLSMLEIFTENWSYES 399 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 V L + I + L +V GIR + Sbjct: 400 VFRYLKSGLTG----IDNTKIDILENYVLACGIRGSRWTQEADWNTSIEFRPDDGQKPEN 455 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 +L ++ + ++ + + + + + E+ + ++ Sbjct: 456 DEMLLNINKTRNEIREPLIRFRN----RTKGRRTAGDFCAGIYEYLVEIGVEQRIRNYIE 511 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 + + + + + L + L + + Sbjct: 512 KFTQSGQLRLAG------EYQQVWNILMDVFDQAVEVMADETFGLEKFANVFKIGLAEYK 565 Query: 650 ISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR-- 706 IS + V + ++ +RS K + +LG NDGV+P G + + R Sbjct: 566 ISSIPASLDQVLVGSIEHIRSHEIKALYILGTNDGVFPSAGMSEGVLSDADREVLDKRGI 625 Query: 707 -------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 +R D++YL L + + L +S+ + PS ++ + + Sbjct: 626 ELASDTKTRAFDEQYLIYRTLTTPKNYLRLSWPIAD-HEGRTMRPSTIISRMRKIFPKVT 684 Query: 760 YLPGDEALNCDESEARVKA-----------HLTCLHTRMPFDPQNYQPGERQSYAREWLP 808 + D+ + A L + + + S EW Sbjct: 685 EKSNIVKPSADKQHIDLIASPIPAFNQLVCALRQKNEGIEQGEIWREIFAWFSGQDEWKQ 744 Query: 809 AASQAGKA--HSEFVQPLPFTLPETVP-------LETLQRFWAHPVRAFFQMRLQVNFRT 859 A + P+ + + + L+++ + P + Q L R Sbjct: 745 KCDAMINALKYRNIAAPVDKSKIRELYGKSPYFTVSRLEKYTSCPFAFYVQYGLGARERK 804 Query: 860 EDS-EIPDTEPFILEGLSRY-------QINQQLLNALVEQD----DAERLFRRFR---AA 904 PD F+ + R+ + + + + + L + Sbjct: 805 IYRMSPPDVGTFMHAVIERFSKMVDENNYSWREFDRQWCSEQVSKIVDELLDSMKNTILG 864 Query: 905 GDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG--------------V 950 G + A + + + + + E+D G + Sbjct: 865 GSKRFKALAVRLKRVVTRAVWLITEHIRRSSFEPVGYEVDFGDGGAYPPMVIELDSGEKI 924 Query: 951 QITGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL 998 ++ G + ++ + R + + VY + L Sbjct: 925 RLVGRIDRIDALRAENGTYLRIVDYKSGEKDFKLSD--VYYGLQMQLITYL 973 >UniRef50_A5EWC3 Exodeoxyribonuclease V, gamma subunit n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EWC3_DICNV Length = 1090 Score = 291 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 241/1174 (20%), Positives = 426/1174 (36%), Gaps = 140/1174 (11%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M R+ + L L + DD F I+V S +A +L+ +++K GI+ Sbjct: 1 MFRITQATDLAHLMPDFLTALHDYP-DDIFAETEIVVPSMAIADYLEHHIAEKMGISCRH 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQL------LEREDFTLLRHY 114 + W + R+ ++ + ++ W+L + L E L HY Sbjct: 60 RYRFWGEMEWTIIERLSNRSAAQTPLSTTAIHWQLFSWLYAHRAEILADEDHVLAPLLHY 119 Query: 115 L------TDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL------VEGLGEAQ 162 L D+ +L+Q S + A LF YL RPDWL W+ + L E Sbjct: 120 LLAPSSARDEQTLPRLWQFSGEQAQLFTHYLKMRPDWLLTWQQKPDCHLEDIIATLPEMP 179 Query: 163 AW-----------QAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRV 211 W Q LW+ L HR ++F L P LP+R+ Sbjct: 180 TWLRQHYDGVFTVQKYLWQQLFAEA------MEHRQQRIEQFYHRLSVDDALPA-LPARL 232 Query: 212 FICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFED 271 F+ +L L LQA G+ E+HL Y+ DI D + Sbjct: 233 FVFHPFSLTDHMLHWLQAFGQRCEVHLWLALVSNGYFPDIVDERWRQ------------- 279 Query: 272 RELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSD---LESSQEL-DAFV 327 N+D G+ L++ +GK RD L LE Q + Sbjct: 280 -------------SHTNADEHFRSGHVLVSRFGKQQRDIFRLCQSHNLLEEIQHITPHSA 326 Query: 328 DVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVE 387 D +LL +Q+D+ L++ S PL P D SI H CH R++E Sbjct: 327 DTAQQSLLQRLQADMRALDD-----------QSSLTAAPLVPNDDSIRIHGCHGLLRQLE 375 Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY--LPYAISDRRAR 445 +L + L+ L D T DI++++ +++S I+ VF ++ LP ++ Sbjct: 376 LLREELVRWLNADETRQLSDILIVLPELESVQDVIRTVFPASGDYDGAVLPARLTGIIDS 435 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 + + +A + L + F L + + + I ++ ++ + +G G Sbjct: 436 SAQRLWQAISGIYVLATTPFNRHTFLQWVLQEEVCTAYGIADKAMQRTCDQLIAAGFYRG 495 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 + ++ + + T + L R+L G AM A ++++P A + LA Sbjct: 496 FEQQDLETV-ADGDARFTLSYALERLLSGLAMPQADIWLENIVPEHNIRNDDAAALAVLA 554 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA---- 621 + Q++ R + WL R L F T A LI Q + Sbjct: 555 QIHQQISTIRVQQKNHTTAQFWLDELRQRLEHDFSAFQTTA-AWQLIAQTLTELTEKLQA 613 Query: 622 --EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 + A +PL + + + ++L ++ +G + I + MR++P++++ +G Sbjct: 614 HHQLTAAAADLYLPLPFILNYIGEQLSTRQV-ASEPSGVITIGRIGAMRALPYRLIAFVG 672 Query: 680 MNDGVYPRQLAPLGFDLMS-QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 + +P ++A +L++ P+ GD R D+ FL AL SA + Y D Sbjct: 673 ADQEQFPHRIAEQRHNLLTIDAPRLGDYHREHDELGSFLHALSSAGSHFWCFYTAVDPND 732 Query: 739 NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE 798 + ER P+ VQEL+DY+ Q + H H PF + Y+ Sbjct: 733 HEERLPAAPVQELLDYLAQ--------------NGVDQYLHYHLRHQPNPFHREPYRTAP 778 Query: 799 RQSYAREWLPAASQAGKAHSEFVQ---PLPFTLPETVPLETLQRFWAHPVRAFFQMRLQV 855 + + A + +T+ L + R P R F + ++ Sbjct: 779 APLWQKVQHHLQQSAPDVLPFLPESETFTVNQAEKTMLLSQIARDLLKPARTFLRAH-KI 837 Query: 856 NFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEI 915 + D EP + + S Q+ AL+ F+ LP GA G Sbjct: 838 DCSVTDVATDILEPLVFDAQSDGLKRWQIYQALLNDSP------HFQYLPFLPAGAAGHH 891 Query: 916 FWETQCQEMQQLADRVIACRQPGQSMEIDL---ACNGVQITGWLPQVQPDGLLRWRPSLL 972 + Q Q ++ ++ C ++ + L + + QI+ LP V+ + + Sbjct: 892 YHLLQNQRIEAQRAQLFECTGERENTPLQLKTVSFSNGQISADLPAVEVNKWVSLSARRY 951 Query: 973 SVAQGMQLWLEHLVYCASGGNGESRLFLRKDG---EWRFPPLAAEQALHYLSQLIEGYRE 1029 SV WL +L++C G GE L + +RF PL E A L + + Sbjct: 952 SVRSIFSEWLHYLLWCVQTGGGERWLSFAEKEMSVVYRFLPLECETAERELKNWLAIWSR 1011 Query: 1030 GMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIW 1089 + + L + E + +KA ++L + + + Sbjct: 1012 -LDSILGMPLEIAWEIAVAQKEKNP----------EKAVEQWLNKEIYDD------EKEY 1054 Query: 1090 YQRLWRQLT--PETMEAIVEQSQRFLLPLFRFNQ 1121 +Q L R ++ E Q L + + Sbjct: 1055 WQLLLRGQNSTELLLKRWHEY-QPLFAFLVQHIE 1087 >UniRef50_A8RRN9 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RRN9_9CLOT Length = 1196 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 122/1090 (11%), Positives = 271/1090 (24%), Gaps = 162/1090 (14%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQM--TLSQKFGIAAN 59 L+ ++ V +E ++ P + +++V Q + L + GI N Sbjct: 13 LQFILGGAGSGKTRMLYDRVIKESMEHPEQKYLVVVPEQFTMQTQKEIIRLHPRHGI-MN 71 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 ID + +F + IP +SM + + L + +L +L Sbjct: 72 IDILSFKRLAYRVFEDLGVRIPVVLDDMGKSMVLRKVAGLKR----GKLSLYSGHLEQTG 127 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 + QL S+ ++L+ QY + PD L L + ++ EY Sbjct: 128 ---FIGQLKSQISELY-QYGIT-PDMLRDVRGEADSPLLAQKLEDLEVIYSGFREYIESH 182 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVF-ICGISALPPVYLQALQALGKHIEIHL 238 + ++ L L + + G + PV + + L Sbjct: 183 YITA-------EEILDILCRELPKWEPLKDSIILLDGYTGFTPVQYRL---------VEL 226 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 + D A + + + R S Sbjct: 227 FLMHAREVVCTVTIDSRENAYKESSIQHLFYMSRHTVCRVASMAKQHGIPKKE------- 279 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 ++ + L ++ + Sbjct: 280 -------------DIICSRRPA------WRYDESPELDFLEQN----------------- 303 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 + R + + I + +P E + R+ M+ ++ + RD V+ D+ SY Sbjct: 304 LYRYSGRTWEGKEERIQVYKGRNPAGEAAYVCSRIEQMI-KEEGMRYRDAAVITGDLPSY 362 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 + F A +PY + D+++ +P++E + L + F E L + Sbjct: 363 GRELAHQFDEA----GIPYFLDDKKSILENPMVELIRAALEMVKD-FSYESAFRYLKTGL 417 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 + + TEE A R L + Sbjct: 418 VYDKAGSTEERAAADTAADTSGDAGEADAGSGFNGSREHAEQMTDRLENYVRALGIRGWK 477 Query: 539 SAQGEWQS--------------------VLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 W+ + P +AS+ L + + Sbjct: 478 RWDSCWERQYRGGEKLNLKELNQYRMWILEPLRPLREAFKAEGATIASVTAALRQFLEHM 537 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 LEE+ + D + + + G + + Sbjct: 538 ELREKLEEYRDFFLE---RKEPGDENLAREYGQVYDRVLELFERLEGLLGAEKADMKNYI 594 Query: 639 DELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 L + ++ V + + R KV+ +G+N+G P++ Sbjct: 595 QILDAGFQEIQVGVIPATVDQVMVGDITRSRLEAVKVLFFVGVNEGTVPQRKNGGSLLSD 654 Query: 698 SQKPKRGDRSRRD---------DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 + ++ + ++L ++Y G + D + PS L+ Sbjct: 655 RDRAALRKMDIELAPTVKEDGCIQKFYLYLMMSKPSRQLVLTYAGLTP-DGKSQRPSNLM 713 Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT---RMPFDPQNYQPGERQSYARE 805 E+ L + + L D + + + Sbjct: 714 GEVGKLFPGMKTLDEHSVEWPVRTGRDARELLIQGLRGMQEQGEDDREREDAAFMQLFQH 773 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPETV---------------PLETLQRFWAHPVRAFFQ 850 + + K + + L++F + F + Sbjct: 774 FYTSQEHRDKVRQLVDAAFYSYEERGIGRAAARALYGRELQGSVTRLEQFASCAYAHFLR 833 Query: 851 MRLQVNFRTEDS-EIPDTEPFILEGL--------SRYQINQQLLNALVEQDDAERLFRRF 901 L++ R E E D + + R Q ++L + E + + Sbjct: 834 YGLELMERQEYELEAVDMGNLFHQSIDRCFASMKDRGQDWRELTEEGRKSLVKECVTQVT 893 Query: 902 RAAG------DLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL---------- 945 G + + LA++V E+ Sbjct: 894 EEYGNTIMSSSARNAYLAGRVERITDRTIWALAEQVKKGDFEPVGFEVSFSAIDNLKAMR 953 Query: 946 ----ACNGVQITGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL 998 +Q+ G + ++ + + + Sbjct: 954 IGLSEDEELQLRGRIDRMDLCRDEDHVYVKIIDYKSGTTSFDLAALFYGLQLQLVVYMDA 1013 Query: 999 FLRKDGEWRF 1008 + + Sbjct: 1014 AVEMEERRHP 1023 >UniRef50_B7AS97 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AS97_9BACE Length = 1091 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 131/1052 (12%), Positives = 286/1052 (27%), Gaps = 171/1052 (16%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAA-NI 60 L + L+ + + + +++V + + G + Sbjct: 3 LHFILGSSGSGKSELLYKSIIKASGEQKDRNFLVIVPEQYTMATQKKLVQLHPGHSIIRT 62 Query: 61 DFPLPASFIWDMFVRV-LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 D +F + L K + K+M LR + + Sbjct: 63 DILSFQRLASRVFAELGLEGQTILDDTGKNLIIRKVM--------ENHRKELRAFAGNLD 114 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 + ++ S ++L QY + D L + +++A +EYT + Sbjct: 115 KTGFVSEVKSVISELL-QYAIAPDDMPQIITAVAGNGALADKLTDIEVVYRAFMEYTERD 173 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVF-ICGISALPPVYLQALQALGKHIEIHL 238 + + L + V I G + PV L L Sbjct: 174 YITS-------ESLLSLLAQHVHESELIKGSVIAIDGFTGFTPVQYGLLARL-------- 218 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 L + + E + + Sbjct: 219 ------------------LETAAEVYVTVTIDSNEHINVQ--------DGPESLFA---- 248 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 + ++ I L + ++ P L + +RA +E+ Sbjct: 249 -------MSKETISSLLRIADESHVEV----APYTLCEHTYR-----FDRAPELAFLEQN 292 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 N R +I + +P+ E++ + +L + + + RDI V+ ADI++Y Sbjct: 293 MFRYNGRVYRDEPENIEIYCGITPKEELQFIAAEILRL-TREQGIRYRDIAVVSADIETY 351 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 +F +P + +R ++P++E S +++ +S + E + L + Sbjct: 352 GMLAANIFEQ----NDIPAFVDYKRNIMNNPMIEFMRSGIAVIESGYSYESMFRFLRSGI 407 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 A IT L + GIR ++ + + L E Sbjct: 408 TA----ITPNETDLLENYCLALGIRGRKRW-------YSQWDRNYIKKNREKADLTQLNE 456 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 + + P D + + + LL L + E + E Sbjct: 457 LRYRTVKILEPLDRAYTAASGTTVSVGELLEALYEFVAASDIEHKMNELADRLE------ 510 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-AG 657 + + I + ++ E + + L L++ ++ A Sbjct: 511 LNEENALASQYRQIYPKVMSLFDEIYSLLGEEKIKRKEFARLLDSGLEEIKVGLIPPTAD 570 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK---------PKRGDRSR 708 V I + R KV+ G+NDG+ P++ G + R + Sbjct: 571 CVLIGDMQRTRLDNIKVLFFAGVNDGIVPKKSENKGILSELDRYILENASVTLSPDARKK 630 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 +R+ L KLY++Y D ER PS V+ + + D Sbjct: 631 AFIERFYLYMNLTKPSWKLYLTYAA-RGIDARERRPSYFVRTMYKLYPKLSMRTCD---- 685 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 D N +EW SQ + + Sbjct: 686 ---------------------DMNNDMWLTIPKADKEWNIKDSQINLVQAAADALYGTDV 724 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIPDTEPFILEGLS----------- 876 E+V L++F + F + L ++ R + DT + + + Sbjct: 725 RESV--TRLEQFASCEFAHFLRYGLGLDERDVYTISASDTGSILHKSMECISSEVIRSGM 782 Query: 877 ---------RYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 R++I ++++ + + E E + + + Sbjct: 783 SFADMKDEQRHEIVGRVVDTVAAEYGNAVFKDSS------RNEYMIEKVKELTQRTVWAI 836 Query: 928 ADRVIACRQPGQSMEIDLAC--------NGVQITG---WLPQVQPDGLLRWRPSLLSVAQ 976 ++ + +S E+ + V++ G + + + + Sbjct: 837 GRQLEQEQFVPESFEVRFSLPMNESVSKRKVELVGSIDRIDVCEDGDNIYIKIIDYKTGN 896 Query: 977 GMQLWLEHLVYCASGGNGESRLFLRKDGEWRF 1008 + + + + Sbjct: 897 EKFSLYKTYYGLRIQLMTYMIAAMEHEKKLHP 928 >UniRef50_A4IKW6 ATP-dependent helicase/deoxyribonuclease subunit B n=10 Tax=Bacillaceae RepID=ADDB_GEOTN Length = 1167 Score = 289 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 134/1126 (11%), Positives = 288/1126 (25%), Gaps = 201/1126 (17%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG--IAANIDFPL 64 S + + ++ + + LV Q + L G Sbjct: 12 SGKTTACLEEIRRQLQEDPKG---RTIVYLVPEQMTFQ-CEYALIHTEGTEGMIRAQVFS 67 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 W + + + ++R + + KL Sbjct: 68 FPRLAWRVLQETGGMNR------------------YHVHDVGVQMMIRKIIEQRKQELKL 109 Query: 125 F-----------QLSSKAADLFDQYLVYRPDW------LAQWETGHLVEGLGEAQAWQAP 167 F QL A+ +Y + + L L + + A Sbjct: 110 FGRAADKSGFVEQLHEMIAEC-KRYCLTPDELRRHAGVLESGSGQPGRRLLADKLSDVAL 168 Query: 168 LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGL-PSRVFICGISALPPVYLQA 226 +++ L + ++ L L + ++I G P Sbjct: 169 VYEELERSLLGHYLDS-------EDYLRLLVEHIPRSSYLHGADIYIDGFHHFSPQEYMV 221 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 ++ L + R Y + D L L Sbjct: 222 IEQLLHRCRRVTVCLTADRPYDVGMPDELDLFYLP------------------------- 256 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE 346 L +L + ++ + + + Sbjct: 257 ---------------------AQTYRQLRELALANDIMIESP-------VVLSVNRRHQD 288 Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 A ++EE P + +I + + + E+E + ++ ++ D R Sbjct: 289 K---ALAHLEEQFHRRPLLPYEAETDAICLYEAANRRAEIEAVAREIIRLV-RDEGARYR 344 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 DI +++ ++Y ++ VF +PY + ++ HP++E + L +R+ Sbjct: 345 DIALIIRQTEAYRDLVKTVFFD----FDIPYFMDEKEPMHYHPLIELVRAALETVVTRWR 400 Query: 467 SEDVLALLDVPVLAA---RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 E V + +L + E L +V G++ G + Sbjct: 401 YEAVFRAVKTDLLFPVDGDLAMWREAADKLENYVLAHGVK-GEKWTSDERWTYRRYQALD 459 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + +++ L L ++ L + Sbjct: 460 GLNVPQTDEERQFEDKLNEWREALAAPLRRLERRLRRAADGRGLCTALYLFLEELQIPKK 519 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 LE+ ++ + + + +PL+ + Sbjct: 520 LEQMSAQAEA------DGRLVEARQHEQAWNAVVDLLDQYVEMLGAEPLPLAEFAKIIEA 573 Query: 644 RLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 LD+ + A V + L R I K ++G+NDGV P ++ G ++ + Sbjct: 574 GLDRLEFALVPPAIDQVIVAQLDRSRLIDVKYAFIIGVNDGVIPAKVKDEGLVAEVEREQ 633 Query: 703 R---------GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 G R + D + AL ++LY++Y + PS L+++L+ Sbjct: 634 LRELGVALAPGGREQLFYDPFFVYLALACPSRRLYVTYPLADG-EGKALMPSPLIKQLVQ 692 Query: 754 YIG---------QSHYLPGDEALN----CDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 P ++ ++ + + L DP + Sbjct: 693 LFPRVSVHLCGNDPFDAPEEKPETFVTVPRATQTYLISQLRAWKRNYGIDPLWWDVYNVL 752 Query: 801 SYAREWLPAASQA-GKAHSEFVQPLPFTLPETVP-------LETLQRFWAHPVRAFFQMR 852 EW QA L + + +++F P F Sbjct: 753 ISHPEWRARVEQAVSGLFYTNQAVLKREWSRRLYGKKIQASVSRMEQFQKCPYAHFASHG 812 Query: 853 LQVNFRTEDS-EIPDTEPFILEGLSRYQINQQLLNALVEQ----------------DDAE 895 L++ R E PD + QI ++ ++ + Sbjct: 813 LRLKERNVFRLEAPDVGQLFHAAIK--QIADRVREQHLDWKQLSRSECERLSAEAVERIA 870 Query: 896 RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG------ 949 L ++ + Y + L++ A E+ G Sbjct: 871 PLIQQQVLSSSNRYEYMKRKLKNVVARTTHVLSEHARASGFAPVGFELSFGPGGDLPPLR 930 Query: 950 --------VQITGWLPQVQP---DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL 998 +++ G + +V + R + E A + Sbjct: 931 FQLRDGTVMELVGRIDRVDKAESSQGVLLRIIDYKSSAKTLDLTEVYYGLALQMFTYLDI 990 Query: 999 FLR-KDGEWRFPPLAAE-----------QALHYLSQLIEGYREGMS 1032 L + P L A QA +L +E R+ + Sbjct: 991 VLTYAEQLVGEPALPAGVLYFHIHNPIIQAKQWLDNEMEVARKLLE 1036 >UniRef50_D2LU04 ATP-dependent nuclease subunit B n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LU04_BACS4 Length = 1171 Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 126/1081 (11%), Positives = 281/1081 (25%), Gaps = 184/1081 (17%) Query: 14 EALMEFIVERERLDDPFEPEMI-LVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDM 72 M + + + DP +I LV Q + K I + + Sbjct: 15 TTYMLNNMIDDAIKDPQGATIIYLVPDQMTFQSEMQLVQSKQRGMTRIQVLSFSRLALRV 74 Query: 73 FVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAA 132 + + + L+R + + K+F +S Sbjct: 75 LQELGGITK------------------QHIQKTGVQMLIRKIVETEKKSFKVFSKASDTN 116 Query: 133 DLFDQ----------YLVYRPDWLAQWETGHLVEG-------LGEAQAWQAPLWKALVEY 175 DQ Y V Q+E E L E ++ L ++ Sbjct: 117 GFIDQLEQMITELKRYDVSADTLTEQYEALEQRENKRPSEQILQEKLHDIGIVYNNLGKH 176 Query: 176 THQLGQPRWHRANLYQRFIETLESATTCPPGLPSR-VFICGISALPPVYLQALQALGKHI 234 + ++ L L +FI G + P+ + +Q L H Sbjct: 177 FKDEYVGA-------EDYLHLLSEKVAHSNYLKQSHIFIDGFHSFTPLEMLVIQELMLHC 229 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 R+Y + A L D + Sbjct: 230 THTTFSFTLDRHY---------------------------------DTAEVLNELDLFFE 256 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL--ELENRAVAG 352 +V ++ L + IL L ++ A Sbjct: 257 TAKSYQTI------------------------QNVCREHNLEVNRPFILQMSLRFKSKAI 292 Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 ++E+ + D I + EVE + +L ++ D + ++I++++ Sbjct: 293 AHLEKNYEIRPSPVYETNDG-IRVISAVHRRSEVEGIAREILHLV-RDKSYRFQEIVLIL 350 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 +I Y+ +Q VF +P + +R+ +HPV+E S L + + E V Sbjct: 351 RNITDYTDLLQTVFEDY----GIPLFMDQKRSMLNHPVIEFIRSSLEVIYGNWRYEAVFR 406 Query: 473 LLDVPVLAARFDI---TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 L +L E + L +V GI+ G+ + + Sbjct: 407 CLKTDMLFPLESHVSEMRERVDQLENYVLSYGIK-GVRWYDKKPWSYRRVKTSADGERKR 465 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 + + + + + + +E Sbjct: 466 TTAEDEFEQEINQLRNELTKPLIWLQKQMKASKTVTEKCETIYHYLVMCQIPEKIERMRN 525 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 ++ + + + ++ + + + V L + + ++ + Sbjct: 526 ------DSVASEELQRAKEHDQVWSAIVELLDQMVEMAGDEDVSSELYKKMIDTGVESMK 579 Query: 650 ISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR-- 706 + A V + + R + +LG+NDG+ P + ++ Sbjct: 580 FAIIPPAIDQVIVADMEHSRLSNIRCAFILGVNDGIIPAKPDEGSIVTEEERDTLAQAGI 639 Query: 707 -------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 + ++ +L A +A + LY +Y + PS++++ + D+ Sbjct: 640 NLAPSSTRQLLNETFLMYLAQSTASELLYFTYPLADE-EGKSLQPSIVLKRIKDFFPSLE 698 Query: 760 YLPGDEALNCDESEAR-------------VKAHLTCLHTRMPFDPQNYQPGERQSYAREW 806 E + + L + W Sbjct: 699 EELWFHEPTDMTDEEQFFFINGSDKTLSYLTFVLQSWKKGYSIPSFWWDVYNWYVANENW 758 Query: 807 -------LPAASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQVNF 857 L + KA + + + ++++ + F L++ Sbjct: 759 NFKVKQVLHSLFYKNKAQQLSKHTSKELYGDHLVTSVSRMEQYQSCAFAQFANYGLRLKE 818 Query: 858 RTEDS-EIPDTEPFILEGL------------SRYQINQQLLNALVEQDDAERL--FRRFR 902 R E PD L Q++++ + L ++ E +R Sbjct: 819 RETYKLEAPDVGTLFHAALKEMADYLRRNGKDFSQLSKEECSTLAKKIVEELAPKIQREI 878 Query: 903 AAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG------------- 949 Y + E + LA++ + +E+ N Sbjct: 879 LLSSNKYHYIKQKLEEVVARASHVLAEQSRSSGFSPIGLEVAFGENQDLPPLQFQLQNGT 938 Query: 950 -VQITGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGE 1005 +++ G + +V L R + E + + + Sbjct: 939 TMELVGRIDRVDMAEGRDGLYLRIIDYKSSAKNIELSEVYYGLSLQLLIYLDVVITFSER 998 Query: 1006 W 1006 W Sbjct: 999 W 999 >UniRef50_UPI00017899D8 ATP-dependent nuclease subunit B n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017899D8 Length = 1176 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 148/1073 (13%), Positives = 298/1073 (27%), Gaps = 162/1073 (15%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGI--AANIDFPL 64 S + + M +E DP +++V G + + L GI Sbjct: 12 SGKSTSIRQEMIERLEHNPKGDPM---ILIVPEQGSYE-AEHALVNAGGIRGMMRAQVLS 67 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 + + + E LL L ++ + Sbjct: 68 FRRLAYRVMQETGGAAKV------------------AISEEGKRMLLYKILRRRKEELHM 109 Query: 125 FQ-------LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTH 177 F K ++L+ + Y + + + L + L + Sbjct: 110 FGASGEQHGFVGKLSELYTEMKRY---CIDASCVEEQLGQMVSGSGNSPMLRRKLEDIVT 166 Query: 178 QLGQPRWHRANLY---QRFIETLESATTCPPGLPSR-VFICGISALPPVYLQALQALGKH 233 + Y + + +L T + ++I G P + LQ + H Sbjct: 167 VFRDFEVEISRFYMDEEDTLASLAEGVTESEYIKRADIWIDGFHGFTPQEYRVLQEIIVH 226 Query: 234 IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ 293 + + + Y H + + G + Sbjct: 227 AKRVTIALTLDKPY-------------RNGTVPHELDLFHPTAVTYIKLKGIIDEIG--L 271 Query: 294 DVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 + + +L L F + +L +++ + + R Sbjct: 272 EAEHRIL------------------HPDVLPRFQESP---MLAHLERGY-DRKKRWAEPD 309 Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA 413 D + + H + E+E +L + ++ R++ V V Sbjct: 310 -----EGPDTASSPNRGRKGLLLHAASHRRAEIEGALREMLRL-AQEEGARYREMAVFVR 363 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 ++ Y + +F +PY + +R+ HP++E S L + R+ EDV Sbjct: 364 NMGDYEHLMGPLFREY----GVPYFLDQKRSELHHPLVEFIRSALDVIGRRWRYEDVFRC 419 Query: 474 LDVPVLAARFDI-TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 + +L T E + L V SGI+ D +P+ + G + + Sbjct: 420 VKTDLLLPLDGSLTREDMDRLENHVLASGIQGTRWTDGRPWKGVPSL---SLEEGESEIR 476 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 M + + + + + + + A LE Sbjct: 477 NQDGMAAIEYARKVITEPLHAFEKRMKKAASATDQSTAVYRLLEECAVPEKLELLSRA-- 534 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 A E + ++ + + + + L L L + +++ Sbjct: 535 ----ALDAGRPEEAREHRQVWGAVLGLLDQIVEMMGAEKLSTELFTGVLGTGLTEMKMAL 590 Query: 653 RFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR----- 706 + V I ++ R+ K LLG+NDGV P Q G ++ DR Sbjct: 591 VPPSLDQVLIGSMDRTRTGGVKYAFLLGINDGVLPAQFQDDGILTEPERVHLEDRGLELA 650 Query: 707 ----SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG------ 756 R D+R+L AL SA ++L++SY + PS +V+ L Sbjct: 651 PSISRRLLDERFLIYNALTSASKQLWVSYPAADD-EGKPLLPSEVVRHLKLMFQLEEEPL 709 Query: 757 -------QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR----- 804 QS A+ D++ A + L + + Sbjct: 710 FPRPHAGQSALEQEGYAVRPDKTLAYLAGRLRDWRNGEEIPDLWWHVYNWYAEQPGLRPR 769 Query: 805 --EWLPAASQAGKAHSEFVQPLPFTLPETVP--LETLQRFWAHPVRAFFQMRLQVNFRTE 860 L + S +A ++ + + ++RF A P F L++ R Sbjct: 770 LTTMLSSLSYRNEARPLKLETSRQLYGTKLRTSVSRMERFVACPFSHFASHGLKLRERQL 829 Query: 861 DSE-IPDTEPFILEGLS----RYQINQQ----------LLNALVEQDDAERLFRRFRAAG 905 PD LS ++Q + L A D + + Sbjct: 830 YRLQAPDIGQLFHAALSSMAVKFQSQHRSWGDLTAEECLREAEATVDRLAPMLQGEILLS 889 Query: 906 DLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN--------------GVQ 951 YG + L ++ + +E+D ++ Sbjct: 890 SKRYGYISRKLKNIVGRASVILGEQARRGKFEPIGLELDFGPGKPLPPLAFELPNGTKME 949 Query: 952 ITGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLR 1001 I G + +V + + R +Q + H VY + L + Sbjct: 950 IVGRIDRVDMARGEHGIMLRVIDYKSSQ--KDLRLHEVYYGLSLQMLTYLDVL 1000 >UniRef50_UPI0001850BBB ATP-dependent nuclease, subunit B n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001850BBB Length = 1158 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 125/1080 (11%), Positives = 275/1080 (25%), Gaps = 183/1080 (16%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAA--NIDFPL 64 S + + ++ ++ + P + LV + L Q I Sbjct: 12 SGKTATIIKEIKEKLKENPMGRPI---IYLVPEQMTFLS-EYALVQDEEIKGIIRAQVYS 67 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 W + L L+R +TD D+ L Sbjct: 68 FTRLAWRVLQDTGGMNR------------------YHLSSVGLNMLIRKIITDHKDEFTL 109 Query: 125 F-------QLSSKAADL---FDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 F + D+ F +YLV + + E L + +++ Sbjct: 110 FKKASDKPGFVKQVEDMLIEFKRYLVEPETIMGETE----SRVLSDKLHDLEIIFREFEL 165 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSR-VFICGISALPPVYLQALQALGKH 233 T + + ++ L S+ L ++I G + P +QAL + Sbjct: 166 ATKEKYIDS-------EDYLTLLSSSIERSSYLKDADIYIDGFHSFTPQEYAVIQALMER 218 Query: 234 IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ 293 + + R + L ++ Sbjct: 219 TKRVTIAFTIDRSTQLPYGETKQLFRMTE------------------------------- 247 Query: 294 DVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 + I + + S ++ + D I LE Sbjct: 248 ---------------ESISKIESIAYSSQIQQDPMIVLDTQARFKSQTIAHLERHWETRP 292 Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA 413 ++ S + E+E + + + + RDI + + Sbjct: 293 SVPSNESSYVTIVEAANP-----------RAEIEGIAREIRRL-AREEGYRYRDIALFLR 340 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 + Y I+ +F +P+ + +R +HP++E S L S + E V Sbjct: 341 NSADYGDIIETIFYDYD----IPFFMDQKRTMLNHPLIELVRSTLETIHSHWRYEAVFRA 396 Query: 474 LDVPVLAARFDIT---EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 + +L E + L +V GI+ G N Sbjct: 397 VKTDLLFPLDQSPKKLREKMDRLENYVLAYGIK-GSSWTNKDRWRYRRFRGLELTDSPQT 455 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 + G + + + L + L + LE + Sbjct: 456 DEEREKEHEINELRLFISAPILRLGRRMKRGNTVRDYCISLYQFLEELDIPQKLERFAQS 515 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 D D ++ + + + + D L ++ + Sbjct: 516 AND------RGDVIAAREHDQAWNAVVDLLDQYVEILGDSKISVKRFSDILDAGIETMKF 569 Query: 651 SQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS-- 707 S + V + L R + ++G+NDGV P + G + +R Sbjct: 570 SLVPPSNDQVIVADLELSRLANIRAGFVIGVNDGVLPSKFQDEGILSAEDRTSFANRGVQ 629 Query: 708 -------RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 + +D+ ++ +A + ++LYISY + + S ++ + + + Sbjct: 630 LAPTSTVKLEDEEFVAYKAFTTPSERLYISYALAND-EGKALMSSPYIKRINELLPNIRT 688 Query: 761 LPGDEALN-------------CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 + + S + V L P + + + Sbjct: 689 QLVVQEPSELHVKFQKSYASHPTVSISYVTTQLQLGLRGYQVAPVWWDVYNYYMKSSHYQ 748 Query: 808 PAASQAGKA--HSEFVQPLPFTLPETVP-------LETLQRFWAHPVRAFFQMRLQVNFR 858 + + + + L + + + ++ F + P F L++ R Sbjct: 749 EKVHRILTSLFYQNRTKKLSEETSKELYGESILGSVSRMELFNSCPFSHFASHGLKLRER 808 Query: 859 TEDS-EIPDTEPFILEGLSR-----------YQINQQLLNALVEQDDAERL---FRRFRA 903 E PD L ++ + + Q E L ++ Sbjct: 809 EMYRLEAPDIGELFHGALKWISDMMNDQNRSWKDLNKADCRKLAQHAVEVLAPRLQKQIL 868 Query: 904 AGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG-------------- 949 + + L+++ +E+ NG Sbjct: 869 LSSNRHHYIKRKLELILERASLVLSEQAKVSGFTPVGLELGFGPNGELPPFAFTLKNGIK 928 Query: 950 VQITGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEW 1006 +++ G + +V D R +Q E + + L + Sbjct: 929 MELQGRIDRVDKGVKDEQTFLRIIDYKSSQKDLDLTEVYYGISLQMLTYLDIVLTHSEKL 988 >UniRef50_UPI0001BC38B0 ATP-dependent nuclease subunit B n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC38B0 Length = 1097 Score = 283 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 102/1018 (10%), Positives = 272/1018 (26%), Gaps = 145/1018 (14%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQM--TLSQKFGIAAN 59 +++ + + + +E +P + + +V Q + + G+ N Sbjct: 3 IKILYGPSGHGKTEYVYSDIVKEACANPDKKYVFIVPEQSSLQAQKRVVRMHPSHGV-FN 61 Query: 60 IDFPLPASFIWDMFVRV-LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 ID + +F + + K + K++ + + Sbjct: 62 IDVLTFGRLCYRVFEELQIELKETIDDTGKNLIVRKILNNIKSD---------FRIIKAG 112 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQ 178 + + ++ S ++L QY + PD L + + L + + ++ Y Sbjct: 113 RRQGFVSEMKSMISEL-KQYGIT-PDMLKEIAVSAGSDRLRDKLEDISLIYSEFENYIRD 170 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 + L RFI+ + S V G + PV + ++ + Sbjct: 171 RFVTVEDKPELLYRFIDNSDLLK------GSTVVFDGFTGFTPVQYRLIEKIA------- 217 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 + + N D Sbjct: 218 -------------------------LQAENIIVTVTISSPAINNINTDMGMDELFY---- 248 Query: 299 LLASWGKLGRDYIYLLSDLESSQELD-AFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 + +D I L + + + + D+ + ++ + A +EE Sbjct: 249 -------MSKDTIRKLGVIADNVRIPFLMQRIESDHSKYRFRN--------SPALNFLEE 293 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 N I + + E++ +L + DI V++ D D+ Sbjct: 294 NIFRYNGSTFGGSTEDIHISEHLNGKEEIQYAAAAILKEVRTH-GYRFNDIGVILGDKDN 352 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 ++ +F + +P+ + ++R+ +P++E +++L RF E V +L Sbjct: 353 FANETARIF----KESGIPFFMDNKRSLIGNPMVEYIRGIIALIKERFSYEAVFRVLKNG 408 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + + I +D + + ++ +F + Sbjct: 409 LCGFER------------------DKVNIFEDYILAFGINGFDRYCEKFVRAYKSKEMGL 450 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + + + + + + ++ Sbjct: 451 DVINEVREDFCCLISEFYSDMTKGTKASDYVNAVYDFMEKENLYEEMKMLADN------- 503 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA- 656 D + ++ + + + + + ++ ++ + Sbjct: 504 --TEDEDKAEEFRKSYGHVVTLLERIYDMLGDEPMTVKEFAEIMDAGFEEIKVGIIPPSN 561 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD---------RS 707 V + L R KV+ +LG N+G+ P+ G ++ D + Sbjct: 562 DCVMVGDLERSRIDNIKVLFVLGANEGIIPKTGDNHGILSEDERMTLSDMQIVLSPTPKE 621 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV------QELIDYIGQSHYL 761 + + + LY+SY GR D E PS ++ ++ Y Sbjct: 622 KVFMQNFYLYLNFTRPENTLYLSY-GRYNDDGKEIRPSRVIGIISDMYDIKPYHPDITDF 680 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE-- 819 + + K + + + + + + Sbjct: 681 LTNRQNSFHLVSDYAKIKDYDADKNLAAVISYFVNDDVYGNIIKKIIDSFNENVMSDNLT 740 Query: 820 -FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIPDTEPFIL----- 872 + ++ T + ++ + F L + R E D Sbjct: 741 KEAAKMLYSENLTASVSRIETYAGCAFSHFLTYGLGIGERQEHKITNIDIGDIFHKTLEY 800 Query: 873 -------EGLSRYQINQQLLNAL--VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQE 923 GL+ ++ + V D ++ + + Sbjct: 801 MGCTLMENGLNFGSLSDEERKDFVNVAFDKITADYKYSFFKESAANEFLKMRLSDIVNRT 860 Query: 924 MQQLADRVIACRQPGQSMEIDL--ACNGVQITGWLPQVQ---PDGLLRWRPSLLSVAQ 976 + + +++ A + E + NG+ + G + ++ +G + + Sbjct: 861 VWAMGEQINAGSFIPAAFEHNFIRNINGMTVNGKIDRIDIASENGSNYIKIIDYKSGE 918 >UniRef50_C6IZE2 ATP-dependent nuclease subunit B n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZE2_9BACL Length = 1180 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 143/1087 (13%), Positives = 286/1087 (26%), Gaps = 176/1087 (16%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAA--NIDFPL 64 S + ++ + + + + P +IL G Q ++ ++ G+ Sbjct: 12 SGKTSLILDRVTAKLREQPIGPPL---IILTPEQGTFQ-IEQRIATAPGLRGTVRTQVLG 67 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 + L + + LL + + KL Sbjct: 68 FRRLALRVMQETGG------------------AALVPIDDEGKKMLLYKLMRRRKGELKL 109 Query: 125 FQ-------LSSKAADLFDQYLVYRPDWLAQWETGHLVEG-------LGEAQAWQAPLWK 170 F L + A L+ + Y D+ A E L+E L + + L+ Sbjct: 110 FGHGGDQLGLIDRIAGLYTEMKKYNVDFSALREHYQLLEQTEGESPLLKDKMHDLSLLFA 169 Query: 171 ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLP-SRVFICGISALPPVYLQALQA 229 E +L L + L + ++I G P A+ A Sbjct: 170 EYDEELSRLYIDNEDHVV-------KLAQGASKSAYLRGAEIWIDGFHTFTPQEYTAILA 222 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L K Sbjct: 223 LLK------------------------------------TAASVTVSLTLDRVYSNGNLP 246 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA 349 P LS L + + ++ + L E E + Sbjct: 247 HELNLFYTP---------ASAFVKLSRLAAEEGIEVL---PAELLEARPFPRFRESETLS 294 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 E S P L+ +++ H S + EVE ++ + + + RD+ Sbjct: 295 YLESAYERRSPWPKSEPPQDLEQALSLHRAASRRAEVEGAAREMVRL-AREEGVRWRDMA 353 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 ++V ++ Y + + +PY + + + HP++E + L + + ED Sbjct: 354 LLVRNLGDYEELLAPTMEAY----GIPYFLDQKASMLYHPMIEFIRAALDVVLGFWRYED 409 Query: 470 VLALLDVPVLAARFDI-TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 V + L T E + L + SGI+ D P+ Sbjct: 410 VFRCVKSEFLLPLDGSLTREHMDVLENYALASGIQGYRWFDGRPWKSAPSLSLEQEDQTA 469 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 + ++ + +V + + A + + + + L+ Sbjct: 470 ASVKAMEQLQLLERCRAAVAGPLSAFEKEIRKAKNAADMCAAVFHLLERVEAAQRLDVLA 529 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 + ++ + + + + L L L L + Sbjct: 530 HRMVR------EGKPRQAMEHRQLWSAVLDVLDQIVEMMGDEPLELELFAGVLETGLKEL 583 Query: 649 RISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR---- 703 ++S + V I + RS K + LLG+N+G+ P L G ++ + Sbjct: 584 KVSLVPPSLDQVLIGSTERTRSGQVKHLFLLGINEGIMPANLQEEGVLSEQERERLAELG 643 Query: 704 -----GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 G + D+R+L EAL A + L++SY + PS +++ + Sbjct: 644 LELAPGLARKLLDERFLIYEALSGASRSLWLSYPAADG-EGGALLPSEVIRHVKRIFPGL 702 Query: 759 HYLP------------------GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 P + + + L P ++ E Sbjct: 703 TERPLLLTPGPASRSADPMASQLEFVSRPGPALNALIGQLRLWKAGESISPLWWRVLEWY 762 Query: 801 SYAREWLPAASQAGKA--HSEFVQPLPFTLPETVP-------LETLQRFWAHPVRAFFQM 851 EW A++ + + V+ L + + +++F A P F Sbjct: 763 KTRPEWESKAARLLTSLDYRNRVRGLTPATSRRLYGKRLRTSVSRMEQFSACPFAHFASH 822 Query: 852 RLQVNFRTEDSE-IPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRF--------- 901 L++ R PD LS+ I + N E + Sbjct: 823 GLKLKERQLYRLQAPDIGQLFHAALSQMAITFKAQNRSWGSLTPEEAIQAANSAVDELAP 882 Query: 902 -----RAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG------- 949 YG + L ++ E+D Sbjct: 883 KLQGEILLSSKRYGYISRKLKAIVGRASLILGEQARRGSFEPVGQELDFGPGRPLPPLTF 942 Query: 950 -------VQITGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLF 999 ++I G + +V + L R +Q E + + Sbjct: 943 ELPNGCVMEIVGRIDRVDMAEGEQGLLLRVIDYKSSQTDLKLHEVYYGLSLQMLTYLDVL 1002 Query: 1000 LRKDGEW 1006 L W Sbjct: 1003 LSSAEAW 1009 >UniRef50_C0GDI4 ATP-dependent nuclease subunit B n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDI4_9FIRM Length = 1147 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 144/1089 (13%), Positives = 289/1089 (26%), Gaps = 155/1089 (14%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF-GIAANIDFPLP 65 S + + + E + P + LV Q ++ L+Q G Sbjct: 12 SGKTQRCLQSIAHYSKTEPMGPPI---IFLVPEQATFQ-MERELAQMCGGGTFRAQVLSF 67 Query: 66 ASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF 125 + + P S +Q + +L+ E L + R Sbjct: 68 RRLAYHLLQSKGGLPPVMSELGRQMVLRRLLQ--------ESQAELTIFGRAAQQPRFCE 119 Query: 126 QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWH 185 QL+ + +L + YLV Q + E L + + ++ A +T Sbjct: 120 QLAVQIREL-NNYLVSPEMLKNQAASPETGEALRSKLSDLSTVFAAYRTFTAGSFMDPED 178 Query: 186 RANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCR 245 + +E +RV++ G + P Q L AL F+ Sbjct: 179 TLAILAAAVE------EGALPAGTRVWVDGFAGFTPQEFQVLSAL---------FSTAEH 223 Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGK 305 DP ++ ++ P +L G P L Sbjct: 224 VEVALCLDPRHIPAQPQE------DELFHPTLETYLQLRRLVGEA-----GVPAL----- 267 Query: 306 LGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKR 365 L Q+ + A +E Sbjct: 268 -----------------------PPEQLPLDEKQTRFAH----SEALQVLEAGFGRLPVE 300 Query: 366 PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV 425 I + EVE + +L ++ + RDI +++ D Y + A+ Sbjct: 301 SYPREAEEIRLVTAAGTRAEVEAVACDILHLV-REKGWRFRDIGMILRDFSRYHDLVAAI 359 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 F +P+ + +RR+ HP++E S L + F E VL LL +L Sbjct: 360 FQEY----QIPFFVDERRSATHHPLVEFLRSALDAAQANFALEPVLQLLKTDLLPISR-- 413 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRE-LELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 E L + GIR D L + + + + + Sbjct: 414 --ETADKLENYARAHGIRGSRWLDGKPWSFRLRLSLDESRDTATETDAHLEEINEGKTVF 471 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 + + + E L+ W + Sbjct: 472 GRIFTPFNRQVGGSARPAA--DFCRAIWALLESTDAELQLQNWSEE---------DANPA 520 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICT 663 T A + ++ + + + L L L+ + V + + Sbjct: 521 TAAQHRQVWSGVVELLEQIVSTLGERQISLQEFSQILQAGLEALTLGLVPAGLDQVIVGS 580 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR---------GDRSRRDDDRY 714 + R + +LG+++G +P +L G ++ R + ++Y Sbjct: 581 VERSRQPRLRAAYVLGLSEGDFPARLKEEGLLADEEREALQENGVDLAVTKRQKLFHEQY 640 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG----------QSHYLPGD 764 L AL + + L++S + + PS L L + Sbjct: 641 LSYIALTRSSEYLWVSCPLADE-EGKAKRPSALFNRLRETFPYNDVHFFGNTPDSKEDLH 699 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 ++S A + + + + +E Sbjct: 700 ALAGAEKSAAALLLQAGGVAAGGAMSDFWAAAYNEALSIPQVYNRMRMLWPSLTERNHIA 759 Query: 825 PFTLPETVP---------LETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIPDTEPFILEG 874 P + + L++F P F + L++ R E E P+ F Sbjct: 760 PLPAETVLEILGTELKSSVSRLEQFARCPFAHFARYVLRLQERHEFRVEAPEMGNFFHHA 819 Query: 875 LSRY--QINQQLLNALVEQDDAERL------------FRRFRAAGDLPYGAFGEIFWETQ 920 L + + + L+ + + + + E ET Sbjct: 820 LRLFAESLQAEGLDWAQLETEEAQARMNSIVEELIPRLQGEILLSSARMRYLAERLKETL 879 Query: 921 CQEMQQLADRVIACRQPGQSMEIDLACNG------------VQITGWLPQVQ---PDGLL 965 Q + L + + ++E+ +++ G + ++ +G Sbjct: 880 AQAVAALTEHARRSQFKTVAVEMSFGSGKTPAWQLRCGQTQLKLYGQIDRIDLAEAEGKA 939 Query: 966 RWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIE 1025 R + V+ + L + K+ F L AE A + + Sbjct: 940 WLRVIDYKSTPIELKLSD--VWHGLSLQLLAYLAVVKENARAFSALPAESAGALYFGIHK 997 Query: 1026 GYREGMSAP 1034 Y + P Sbjct: 998 PYERLDNPP 1006 >UniRef50_C0CXR8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0CXR8_9CLOT Length = 1216 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 134/1121 (11%), Positives = 284/1121 (25%), Gaps = 204/1121 (18%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQM--TLSQKFGIAAN 59 L+ + R L+ P +++V Q + L + GI N Sbjct: 11 LQFVFGGSGSGKTRYLYEQAIRLSLEQPDRRFLVVVPEQFTMQAQKEIIRLHPRHGI-MN 69 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 ID + +F + ++P L + +LR Sbjct: 70 IDVLSFKRLAYRVFDELAVKMPVV------------------LDDMGKSMVLRRVSGRKK 111 Query: 120 DKRKLF-----------QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPL 168 L+ QL S+ ++L QY + P L + L + + Sbjct: 112 SGLGLYGSHLGQAGFINQLKSQISEL-CQYGIT-PQDLELLQGETENPLLKQKLGDLGLI 169 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSR-VFICGISALPPVYLQAL 227 ++ +Y + ++ L L + +F+ G + PV + + Sbjct: 170 FQEFKDYIADHYITA-------EEILDILCRELPRSEMLKNSVIFLDGYTGFTPVQYRIV 222 Query: 228 QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF 287 + H + Y D + + L + + E + Sbjct: 223 ELFITHALDVVCAVTV--DYGADPYRESGIQNLFYMSKHTVCRLAAMAKAGGVELKEDVI 280 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN 347 Sbjct: 281 LDRRP-----------AWRFAQ-------------------------------------- 291 Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 + A +E+ N R + +P+ EV + R+ +++ + L RD Sbjct: 292 -SPALDFLEQNLYRYNGRAWKGEQDQVKLFCGQTPEEEVRYVKSRIESLV-REQGLRYRD 349 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 + V D+ +Y I F A +P+ + D+++ +P++E ++L F Sbjct: 350 MAVATGDLAAYGREITRQFDQA----GIPFFMDDKKSILENPMVELIRAVLEAVRD-FSY 404 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW-GIDDDNVRELELPATGQHTWRF 526 E+V L ++ R + T + + + + + ID + + EL Sbjct: 405 ENVFRYLKTGLVYDRAEGTADEAQPVWENAAGADSGGEAIDWEEASDGELADVLLGETGG 464 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL------------------L 568 G R ++ + +G A L Sbjct: 465 GADRRYSREEAAVMTDRLENYVRALGINGWKRWDSQWEAQFKGAENLNLQELNAFRQWIL 524 Query: 569 MQLNIWRRGLAQERPLE-------------EWLPVCRDMLNAF----FLPDAETEAAMTL 611 L R ++++ + E + F D Sbjct: 525 APLRPLREAMSKDATVASVTQALRNYLESMELREKLEEYQAYFAARGLRGDENLAREYGQ 584 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSI 670 + + + + G + L + ++ V + + R Sbjct: 585 VYDRVEELFERLTGLLGDEKAERKSYAQILDAGFGEIQVGVIPATIDQVMVGDITRTRLD 644 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQK------PKRGDRSRRDD---DRYLFLEALI 721 +V+ +G+NDGV P++ + + R+D ++ L Sbjct: 645 GVQVLFFVGVNDGVVPQRKNGGSLLGDRDREFFKAHRLELAPTAREDGCMQKFYLYLMLS 704 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 ++L I+Y GRS D PSVL+ E+ G ++ K L Sbjct: 705 KPSRRLVITYAGRSA-DGKSLRPSVLLGEVYKLFPGLTAEDGSTVKWPVQTPRDGKETLI 763 Query: 782 CLHTRMPFDPQN---------YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET- 831 + Q + W + VQ ++ E Sbjct: 764 QGLKTYRDLKEPDAADGALEDSQWERKFLELYRWFFGQEDYREEVKLLVQAAFYSYEERG 823 Query: 832 ---------------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIPDTEPFILEGL 875 + L+++ + F + L++ R E E D + + Sbjct: 824 IGRAAARALYGKILQGSVTRLEQYASCAYAHFLRYGLELMERREYELEAVDMGNLFHQSI 883 Query: 876 SR--------YQINQQLLNALVEQDDAERLFRRFRAAGD------LPYGAFGEIFWETQC 921 R + + L + E + + G+ Y Sbjct: 884 DRCFQVMKAQGRDWRNLTEEGRQGLVKESVSQVVADYGNTIMMSTARYAYLAGRVERMTD 943 Query: 922 QEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQITGWLPQVQPDGLL-- 965 + + LA++V E+ +Q+ G + ++ Sbjct: 944 RTIWALAEQVKRGDFEPAGFEVSFSAVDNLKAMRIALSPDEELQLRGRIDRMDLCEDGGT 1003 Query: 966 -RWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGE 1005 + L + Sbjct: 1004 LYVKIIDYKSGGTSFDLAALYYGLQLQLVVYLDAALEMEER 1044 >UniRef50_B0NWV1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NWV1_9CLOT Length = 1126 Score = 281 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 119/1040 (11%), Positives = 286/1040 (27%), Gaps = 182/1040 (17%) Query: 6 HSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQ--KFGIAANIDFP 63 S + D + M ++ ++ E +V + +++ + G NID Sbjct: 19 RSGKTDFIYDQMI----KDSMEHEDEEFFFIVPDQSTLNAQKQLVTRHPRHG-TFNIDVV 73 Query: 64 LPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRK 123 + +F + L + ++R + ++ K Sbjct: 74 GFFRLTYRVFEELSYIPKDL------------------LEDEGKSMVIRKIMEQHKEELK 115 Query: 124 LF-------QLSSKAADLFD---QYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALV 173 +F + F QY V D L + G EGL + + Sbjct: 116 VFASSMKKQGFIDELKSFFAEVYQYDVSMED-LKKITDGMKEEGLRSKMEDILLVMENFE 174 Query: 174 EYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVF-ICGISALPPVYLQALQALGK 232 +Y + + ++ ++ L L + F + G + P+ + L+ L K Sbjct: 175 DYIKERYL-------ISEQLLDVLAQKVEQSEKLKNATFYLDGFTGFTPIQRKVLEKLLK 227 Query: 233 HIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE 292 + + Y L + +++ + + + Sbjct: 228 IGKNVYVGLTLDGRYVRSQYREYELFAMSKKEKYELIKLAQDAGTPVMPD---------- 277 Query: 293 QDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAG 352 + + D L +++ +I Sbjct: 278 ------------------------------IICWPDERDSKELRHLEQNI---------- 297 Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 I +P++E + + + + + +DI+V+ Sbjct: 298 -------ERYPYEIYKDEPEDIKIRCFMNPRQESRTVANEIERFV-REEGYRYKDIVVLT 349 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 AD+DSY ++ F ++PY + R ++P +E +S+L + F + V Sbjct: 350 ADLDSYQNELEKSFDDL----HIPYFVDVNRKLLNNPCIETLLSVLKMIQKDFSYDMVFR 405 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 L + T E +L +V GIR + +L + L Sbjct: 406 YLKSGF----SNFTMEEADFLENYVLACGIRGFARWNRPFASKLFSDEDVGRAEALR--- 458 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 + + + + L+ L + L E + + + Sbjct: 459 -----------IRFIEEVGTLKTGLKRRGSTVKRKLIYLYEFLETLDVEGKMVKKQEMFE 507 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 D A + +Q ++ + + + L L++ +I Sbjct: 508 A------SGDLIAAATYAKVYEQVIDLLEQMAEILGEEKLSYDDFLSVLESGLEEMQIGV 561 Query: 653 RFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP---------K 702 + V I + R+ K++ LG+N+GV P G Q+ Sbjct: 562 IPPSLDQVMIGDMKRTRTEEVKILFFLGINEGVIPAANGGGGVVNDHQREVLETYGINLA 621 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 G + +++ + +LY+SY N+ PS ++ + + Sbjct: 622 PGIKQSAYMEQFYLYLTVSKPTDRLYLSYRMMDAAGNN-NRPSYFIERIQRIFPKLKVTM 680 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR------------EWLPAA 810 +E + ++ + M FD ++ P + + +++ A Sbjct: 681 QEEEVQTGYTKEEALDQMILCLQEMEFDERDDDPEKMKWMQTLYHALKELEPVGDYVDAR 740 Query: 811 SQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DT 867 +A + + +T+ + +++F F Q L++ R +P D Sbjct: 741 FYTNQALPLSKELIHDLYGDTISGSVTRMEKFAGCAFSHFMQYGLRLRKRLVHEILPTDM 800 Query: 868 EPFILEGLSR------YQINQQLLNALVEQDDAERL---FRRFRAAGDLPYGAFGEIFWE 918 + + ++ + E+ ++ E Sbjct: 801 GKVFHKTMELVGKRSDWKFADDASRDEFVELMVEQAVTDIQKELFESSHRNEYVLERMKR 860 Query: 919 TQCQEMQQLADRVIACRQPGQSMEIDLACNGVQ-----------------ITGWLPQVQP 961 + + + + + EI + + ++ Sbjct: 861 ISKRAVWAMEQHIKRGDFTPEEYEIAFGEENHLDSMTFALEDGEKMFFSGVVDRMDSIED 920 Query: 962 DGLLRWRPSLLSVAQGMQLW 981 D + + + Sbjct: 921 DENKYLKIIDYKSGKQKFDF 940 >UniRef50_A8STZ1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8STZ1_9FIRM Length = 1258 Score = 281 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 106/1063 (9%), Positives = 275/1063 (25%), Gaps = 162/1063 (15%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQ--KFGIAANIDFPL 64 S + + + + + +V + + +++ + G + NID Sbjct: 21 SGKTEYMLKTIIEESMLHDDMS----YLYIVPEQFSMEAQRDIVTRHPRHG-SMNIDAIG 75 Query: 65 PASFIWDMFVRV-LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD--DSDK 121 + +F + + F K + +++ + ++D + +Y+ D+ Sbjct: 76 LNRLAYRVFDELSINPGQVLEDFGKSMLVKRIL-----MENQDDLLMYGNYMDKMGFVDE 130 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 K S ++LF QY V R + E +++ E+ Sbjct: 131 MK-----SMMSELF-QYAVDREEIDMAMEQMDSESSTYRKLHDIRLIYEKFEEHN----- 179 Query: 182 PRWHRANLYQRFIETLESATTCPPGL-PSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 + + ++ + L + + S ++ G + PV ++ + L H Sbjct: 180 -ANDQYIVAEQLSQLLAANVEKSQFISKSHMYFDGFTGFTPVQMKLVTQLMSHA------ 232 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL 300 + DI Sbjct: 233 --ASVTFAFDIDPDRIGLAKPKEYE----------------------------------- 255 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 +L ++ I + + +D + ++ Q +I E Sbjct: 256 --LFRLTKETIAAICKAAADVHVDILDN-----VVMCGQGEIPYRFRDDPCLAAFERNIF 308 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + ++ SI + E + ++ ++ + +DI V+ D+ + Sbjct: 309 RYPHQKINGAADSIKLVRTDRARDEALYVASQIRKLV-REKGYRYKDIAVVAGDLHDVAG 367 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 + + A + +P I + A + P + + L++ F V LL + Sbjct: 368 Y----YRQAMDEYRIPVFIDENTALRGDPCSDTVRAFLAVMSDNFSFNSVFRLLKSGMTE 423 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 + + + + + +R + + + R ++ E Sbjct: 424 VAYM----DVERMENYALKRNLRGYKSWL-KEITDKNNSDYAQEMDSIRRQIVSIFGEDC 478 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 ++ + + +L + L LEE + Sbjct: 479 IDVYK---------PSSPNSKDTVTNYTKELYNFLDELHVCEKLEERRKRLYE------E 523 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPV 659 + A I + A+ + + + + + L + I V Sbjct: 524 KLFDEGDAYGQIFDKIVALFDKVVTILGDEKMTVKEYAGVLEAGISDMEIGIVPPTIDRV 583 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP---------KRGDRSRRD 710 + + R K + G+N+G+ P+ + D++ Sbjct: 584 VVGDMTRSRLNHVKALFFTGVNEGIIPKPAKKGKILSNGDRQNLEKCGVTLAPSDKTNAY 643 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 +++ +L LYI + + +D + PS LV + + D Sbjct: 644 IEQFYIYTSLTKPSDNLYIVF-RKMGEDMNAVGPSYLVDRIRNIFPDIEIEDYDLDSQIP 702 Query: 771 ESEARVKAHLT----------CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF 820 E+ +L L Q E ++ + + Sbjct: 703 ETVNGALRYLVSRYDEVGSDGTLQAVKRLIEQQGGNTEYATWLGAMQSGYDYVNETKTLS 762 Query: 821 VQPLPFTLPETVP--LETLQRFWAHPVRAFFQMRLQVNFRTEDSE-IPDTEPFILEGLSR 877 + + + + L+++ + F Q L + R + + + + Sbjct: 763 PETVRLLYGTELTESVSKLEKYAECQFKYFLQYGLGLMDRETYQLNAANVGIILHSSMQK 822 Query: 878 ---------YQINQQLLNALVEQDDAE------RLFRRFRAAGDLPYGAFGEIFWETQCQ 922 + + E + + + Sbjct: 823 MFEYIKTKCGNNWADITETELADRAVEFVDASADDEAAEYFEDSSRAAYVKKFLEDIAVR 882 Query: 923 EMQQLA-------------DRVIACRQPGQSME---IDLACN-GVQITGWLPQVQP---D 962 + L +R + G +E L + + G + +V D Sbjct: 883 TAKTLRTFVLCGDMHPENFERYFDTSKLGDGIENYIFKLPNGMTMSLKGVIDRVDEYVSD 942 Query: 963 GLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGE 1005 G + ++ + L + + Sbjct: 943 GDVYFKIIDYKSSDQKIDKDRVLAGLQMQLVTYGAIAYELEKR 985 >UniRef50_B8DF43 ATP-dependent helicase/deoxyribonuclease subunit B n=16 Tax=Listeria monocytogenes RepID=ADDB_LISMH Length = 1157 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 114/1077 (10%), Positives = 276/1077 (25%), Gaps = 180/1077 (16%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTL-SQKFGIAANIDFPLPA 66 + L + +++ + + +V Q L + + Sbjct: 13 GKTTHLMDEVGEKIKQNS-----KTYIFIVPDQMTFQMETSFLNKENLAGMLGTQIFSFS 67 Query: 67 SFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF- 125 W + +K + + ++R D DK K+F Sbjct: 68 RLAWKILQETGG-------LSKTFL-----------SQTGIEMVIRKAALDQKDKLKIFS 109 Query: 126 ------QLSSKAADLFDQYL---VYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYT 176 S+ A+LF + V D + +L + + +++ E Sbjct: 110 RATSRKGFYSELANLFKEMKQEEVSIEDMVQ--SATNLSTSVNNKVHDISLIYQKYEELL 167 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGL-PSRVFICGISALPPVYLQALQALGKHIE 235 + ++ L L + + I G ++ L + L + + Sbjct: 168 ADKFLEN-------EDYLRLLAEKIADSDYLNRTEIVIDGFTSFSKQELTVIGELMRKCD 220 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 + N ++ + E Sbjct: 221 --------------------------------------KVTVSLTLNVPEIQHGLDEY-- 240 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 S K + Y L +L + +++ + E+ A Sbjct: 241 ------SMFKASTEAYYALLELAKLNGTQVEENKF------FLENKRAKTESLAFLANTW 288 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 ++ H ++ + E+E + + ++ RDI ++ ++ Sbjct: 289 GHNKFM----SFKNEPQNLKIHQANNRRAEIEGIAREIRQLVLN--GYRYRDIAILTRNL 342 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 Y + V + +P I +RA HP +E S L + E + + Sbjct: 343 GDYDVLCETVMEAY----NIPTFIDKKRAMAKHPFIEFIRSSLDAILFNWKYEPIFQAVK 398 Query: 476 VPVLAARFDIT---EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 + + L +V E+GI+ + + + Sbjct: 399 TEFFFDITEKSSLNRRKADILENYVLENGIQNKWKWEKEGDWVYRKIRGLSTNVLPQTDE 458 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 + ++ + L + L + + LE W Sbjct: 459 EIHMQSIINEMRSLIVNPLATLELNLRKAKTGMEFALALYHYLEQVNAVERLESWRQRAE 518 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 + E A++ E + + + L + + LD S Sbjct: 519 E------QGYLELAREHEQAWSSISALLDEFVEVLGEETLDLDSFTEIIGTGLDALEFSL 572 Query: 653 RFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK---------PK 702 + V + + + + KV+ +GMNDGV P + G + K Sbjct: 573 LPPSLDQVVLSDMENAKLLDMKVIFAIGMNDGVMPLRQKDKGIFSDQDRDALRAEDSKLK 632 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI---DYIGQSH 759 ++ ++ L + + KL++SY + S ++++ + + +S Sbjct: 633 PSAKNNIGEEDLLAYKIISLPSDKLFLSYPAADE-EGKVLSESNYLRKIKGQFNELNESV 691 Query: 760 YLPGDEALNCDESEARVK-----------------AHLTCLHTRMPFDPQNYQPGERQSY 802 YL L+ E + ++ T ++ + Sbjct: 692 YLTDPSLLSDAEQSSYIRSKQATLGLLTSQLQMYKRGYTLSSVWWDAYNSYFENEKESIM 751 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETVP--LETLQRFWAHPVRAFFQMRLQVNFRTE 860 A++ L + K ET+ + +++F++ + + Q L++ R Sbjct: 752 AKQVLSSLYYENKTKPLQETTAKNLFGETIHASVSRMEKFFSCEFQHYAQYGLKLEERGH 811 Query: 861 DSEIP-DTEPFILEG------------LSRYQINQQLLNAL--VEQDDAERLFRRFRAAG 905 D L + ++ + + + Sbjct: 812 FQLQAVDMGEIFHGAMEWISAELKRNNLDWGNLTEEECKQMAKLAMTFLAPKIQHEILLS 871 Query: 906 DLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG--------------VQ 951 + + L ++ + +E+D G + Sbjct: 872 SKRMEYIQYKLLQIITRATTVLNEQAKSSAFRPVGLEVDFGLKGDIPPLKIPLQSDSELL 931 Query: 952 ITGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGE 1005 + G + ++ D R + E A + + + Sbjct: 932 LQGRIDRIDMAEQDDRTFLRIIDYKSSSHDLALTEVYYGLALQMLTYLDIVVTNAQK 988 >UniRef50_Q8CRT9 ATP-dependent DNA helicase pcrA n=245 Tax=cellular organisms RepID=PCRA_STAES Length = 729 Score = 279 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 82/723 (11%), Positives = 191/723 (26%), Gaps = 117/723 (16%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA----------WQA--------PL 168 L+ + A L D+ V + LA T + + W + L Sbjct: 37 LTHRIAYLLDEKDVSPYNILAITFTNKAAKEMKARVEHLVGEEAQVIWMSTFHSMCVRIL 96 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISAL--------- 219 + + + + L+S R+FI IS L Sbjct: 97 RRDADRIGIERNFTIIDPTDQKSVIKDVLKSENIDSKRFEPRMFIGAISNLKNELKTPED 156 Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKD------------PAYLAKLLTRQRRH 267 + R D D P L + + Sbjct: 157 AQKEANDFHSQMVATVYKGYQRQLSRNEALDFDDLIMTTINLFERVPETLEYYQNKFQYI 216 Query: 268 SFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAF 326 ++ + L N VG+ + +G G D +LS F Sbjct: 217 HVDEYQDTNKAQYTLVKLLANKFKNLCVVGDSDQSIYGWRGADIQNILS----------F 266 Query: 327 VDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSPQ 383 + P+ ++ + +N A + + + + I ++ + + Sbjct: 267 EEDYPEAKTIFLEQNYRSTKNILNAANEVIKHNSERKPKGLWTANSGGDKIQYYEAMTER 326 Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 E E + + M + ++ ++ V +PY + + Sbjct: 327 DEAEYVVKEI--MKHQRSGKKYSEMAILYRTNAQ-----SRVLEETFMKSNIPYTMVGGQ 379 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 ++ +S L + + + +++VP + I + ++ + ++ I Sbjct: 380 KFYDRKEIKDLLSYLRVIANSNDDISLQRIINVP----KRGIGPSSVEKIQTYALQNNIS 435 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 L + GL ++ Sbjct: 436 MF----------------------------------------DALAEVDFIGLSKKVTQE 455 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 S + + + E + + D E + ++ Sbjct: 456 CISFYEMIQNLIKEQEFLE-ISEIVDEVLQKSGYRDMLDREQSIESRSRLENLDEFMSVP 514 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 + + L + L I + V + T+ + + F +V ++GM + Sbjct: 515 KDYEENTPLEEQSLINFLTDLSLVADIDEADTQNGVTLMTMHSAKGLEFPIVFIMGMEES 574 Query: 684 VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER- 742 ++P A D +++R + A+ A++ LYI+ + + Sbjct: 575 LFPHIRAIKS----------EDDHEMEEERRICYVAITRAEELLYITNATTRMLFGRSQS 624 Query: 743 -FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQS 801 PS ++E+ + + SH + ++ R + T + + Sbjct: 625 NMPSRFLKEIPEDLLDSHTGQKRQTISPKSQPKRGFSKRTTSTKKQVSSSDWKVGDKVMH 684 Query: 802 YAR 804 A Sbjct: 685 KAW 687 >UniRef50_B2A611 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=ADDB_NATTJ Length = 1186 Score = 279 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 146/1126 (12%), Positives = 310/1126 (27%), Gaps = 193/1126 (17%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAA--NIDFPL 64 S + + + ++ DP + LV Q ++ + ++ I+ + Sbjct: 12 SGKTSYIIDSITEQLKAAPDGDPI---IFLVPEQATFQ-MEQAILRRSDISGFSRLHILS 67 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 + L + ++++ L D ++ Sbjct: 68 FQRLSQKVLEEQGGIAKA------------------DLSDTGKEMIIKNILLQRKDDLEI 109 Query: 125 F-------QLSSKAADLFDQYLVYR--PDWLAQWETGHLVEGLGEAQAWQAPLWKALVEY 175 S K + L + +Y P+ L Q + L + + ++ + Sbjct: 110 LEKVAVKSGFSEKLSRLISEARMYEITPEMLEQISQELDLIHLKQKLQEISQVFTDYETF 169 Query: 176 T-HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 HQ + R + + +E S +I G S P L+ L+ L Sbjct: 170 LQHQGYHHQEDRLSKAGQKME----GNNISFLAGSTCYIDGFSGFTPQELKLLEGLLTKC 225 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 L + G I D L + + EL + D E + Sbjct: 226 SNIELALTLPPQFTGKIDDE---LHLFHPTLKTYNQVWELAVNNDIEIKKSKHFPNEN-- 280 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 + + L + + A + Sbjct: 281 --------------------------------EEHRSASSLPRFKDN--------PALAH 300 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 +E+ + P D + ++ + + E++ + + +L D + +DI V+V + Sbjct: 301 LEKEWGKNKINPYDSEPTGLSIVEGTNLRNEIDKIAREIK-LLVRDHGMRYKDIAVIVRE 359 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 ++SY P I+AVF +P+ + + HP++E S + S + E + +L Sbjct: 360 LESYEPVIKAVFNDY----KIPHFLDRKEPVHHHPLVEFLRSSVETVISNWDYEPLFRML 415 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 +L I+ E + + +V GI G D + A Sbjct: 416 KTGLLP----ISSEEIFQVENYVLAHGIS-GKDWKKQGKWNFIANFDLERENIAPSNRNK 470 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 + V + SL Q + E ++ Sbjct: 471 QYLSEINSIKGKVRDTLLEFDSKLRGINKSESLSAQFKNQEAEEDNLLSVREISTYLWEL 530 Query: 595 LNAFFLPDAETEAAMT--------------LIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 + + E ++ + ++ + + V LS Sbjct: 531 IEQLQIEYQLEEWSLEAEERKDFVEMQLHNQLWDTVIDLLDQMVTFLGEQKVTLSEYLQI 590 Query: 641 LAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 + L ++ V + T R KV+ + G++DG+YP ++ G + Sbjct: 591 IESGLANIKLGLLPATLDQVLVGTADRSRYHEIKVLFMAGVSDGLYPAKIDDDGIIDDRE 650 Query: 700 KP---------KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 + + ++YL L QKLY+SY + PS ++ + Sbjct: 651 RITLRQHDVEFAPTTEQKLYQEQYLIYNVLTQPSQKLYLSYPAAD-SEGRTMSPSTIISD 709 Query: 751 LIDYIGQSHYLPGDEALNCDESEAR------------------VKAHLTCLHTRMPFDPQ 792 + + + ++ DE + V + Sbjct: 710 IQEMFPELFQEYQNDGPENDEDFRQYIIDGKKAVSNLIKLINKVGHPEKLAEDKQQLLAY 769 Query: 793 NYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQ 850 Y+ + A + + P + + L+ F P R F + Sbjct: 770 LINEHPDLFYSTPEIKALDYKKSLSPLTQEVIDKLYPNKIATSVSGLESFCQCPFRHFAE 829 Query: 851 MRLQVNFRTEDSEIPDT-EPFILEGLS------------RYQINQQLLNALVEQ--DDAE 895 L++ R P + F GL +++ + ALV + + Sbjct: 830 QNLRLKEREYFRLEPASLGLFYHAGLKLFWDKLQENNLTWHKLKTEEREALVSEIVEVLS 889 Query: 896 RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL-------------ADRVIACRQPGQSME 942 + Y F + E + ++ L ++ +P ++E Sbjct: 890 ERLKNRILLASERYKYFKKKLHELLSRAVEVLSWYSDDKGFYPVGSEIGFGKDEPLSTLE 949 Query: 943 ID---LACNGVQITGWLPQVQ---PDGLLRWRPSLLSVA-------QGMQLWLEHLVYCA 989 ++ VQ+ G + ++ DG L R L Sbjct: 950 LELPSFPNKKVQLKGRIDRIDTGKKDGDLYLRVIDYKGKSKNLELRDLYYGLDLQLAAYM 1009 Query: 990 S------------GGNGESRLFLRKDGEWRFP--PLAAEQALHYLS 1021 + L+ + P++ QA L Sbjct: 1010 TVAMRNSDKLTGDQMFPGGMLYFGVENPVVPTDKPVSPAQARDKLK 1055 >UniRef50_B9E0C6 ATP-dependent helicase/deoxyribonuclease subunit B n=3 Tax=Clostridium RepID=ADDB_CLOK1 Length = 1150 Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats. Identities = 130/1067 (12%), Positives = 285/1067 (26%), Gaps = 185/1067 (17%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG--IAANIDFPL 64 S + ++ ++ + ++LV Q + L + G Sbjct: 12 SGKSHYCLEDIKRRIQEVNDRN----LILLVPEQFSFQ-AEKNLIKSIGEKGTLKAQVLS 66 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 +F V I K + + LL + ++ +K K+ Sbjct: 67 FRRMAEKVFDEVGGGIKKY------------------INDAGKNILLYKIIEENKNKLKV 108 Query: 125 FQ----------LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 ++ L S F +Y + P++L + + L L+ Sbjct: 109 YKTSAKKQGFVNLVSDIIGEFKKYNIS-PEFLKENLDSIENKSLKNKLEDIGMLFLEFQN 167 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 + E L+ + S V+I S P ++ + Sbjct: 168 RLSKNYIDLEDT---LHILCEKLDKSIIFKN---SEVWIDEFSTFTPQEYSIIEKIMCSA 221 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 C G+ L + Sbjct: 222 YRV--NITLCMDALGE-YSERESIDLFLPIKITE-------------------------- 252 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 +L E + + N++ + A + Sbjct: 253 ----------------RNILQIAEKNNIIY--------QKPVNLRCSPCYRFKNSTALQH 288 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 ++ S + + I + E++ + ++ D L +D+ V+ D Sbjct: 289 LQHSLFSYPYKNYEKSTEDINIFKALNKYTEIDYIARDIVKA-CRDKNLRFKDMAVVTGD 347 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 +D Y I+AVF +PY I +R + ++ IS + + + E V L Sbjct: 348 LDEYENLIKAVFNQYD----IPYFIDKKREIIHNQIVILIISAVEILAKNWSYESVFRYL 403 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 +L F + + L +V +GIR G + + + Sbjct: 404 KTGLLDLEF----DDIDILENYVLANGIR-GRQWLDTKPWSFKINYGNFKED--DSEEEQ 456 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 + V + + +L + L +EE + R+ Sbjct: 457 EYLNKINCIRDKVREPILKLSNDIKGKKKGRHICEELYNFLCELKIPEKVEELIIEFRNT 516 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 + + I ++ + + + + + + L Q I Sbjct: 517 ------DRLDKANEYSQIWDIVVDVLDQIVDVLGEQSFGMEIFNEALEIGFSQYEIGVIP 570 Query: 655 LA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR---------G 704 A V + + ++S + + G+NDG++P ++P G + + Sbjct: 571 PALDQVLVSNITRIKSYNISALYIAGVNDGIFPVTISPEGIFTDQDRDELKQNGLEIAPN 630 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 RSR ++++L L + L ++Y + + PSV++ + + Sbjct: 631 TRSRAFEEQFLIYATLTIVDKYLTLTYSMSDE-EGKAKRPSVVISMIKKIFPKLQEKSNL 689 Query: 765 EALNCDESE-------------------ARVKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 + E + + + Sbjct: 690 LDASGYEGGIEAVNSPKVTFNMLISNIRRNLGHRENINSLWIDVYRWYREHEIWNKRLDT 749 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPETVPL--ETLQRFWAHPVRAFFQMRLQVNFRTEDSE 863 L A + + + + + + L++F P F Q L+V R S Sbjct: 750 VLGAFYYNNEIKISDLVKIRRLYGKHLNMSVSRLEKFAQCPFGYFVQYGLKVKDRKMYSL 809 Query: 864 -IPDTEPFILEGLSRYQI------------NQQLLNALVEQDDAERLFR--RFRAAGDLP 908 PD F+ L R+ I +++ + L+ Sbjct: 810 SAPDLGSFMHGILERFSIGLKQKSLTWENVDERCCEENINDLVDNVLYDNPNSILNSSKK 869 Query: 909 YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQITG 954 Y + +T + + +A + R ++ E+ + V +TG Sbjct: 870 YKHVTDKLKKTLTRSVWLIAQHMKKGRFIPRAYELVFGEIGDFPPISIELDSGEKVSLTG 929 Query: 955 WLPQVQ---PDGLLRWRPSLLSVAQGMQLW--------LEHLVYCAS 990 + +V D + R L+ L+Y + Sbjct: 930 KVDRVDTAKEDIITYIRIVDYKSGTREFKLSDVYYGFQLQLLIYLDA 976 >UniRef50_UPI0001692BDC ATP-dependent nuclease, subunit B n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692BDC Length = 1200 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 133/1101 (12%), Positives = 265/1101 (24%), Gaps = 175/1101 (15%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID--FPLP 65 + + ++++ DP + LV Q ++ L ++ I Sbjct: 13 GKTRYCLDEIRNSLKQKPEGDPL---IYLVPDQATFQ-AELELVSSDNLSGMIRAQVLSF 68 Query: 66 ASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF 125 W + + +LL + L + Sbjct: 69 HRLAWRVMQEEGGIAR-----------LPVDETGKKLLLHKLLHEQEKQLVYFQSTYEQL 117 Query: 126 QLSSKAADLF---DQYLVYRPDWLAQWETGHLVEG---LGEAQAWQAPLWKALVEYTHQL 179 LF +Y V + L + L+ A Sbjct: 118 GFVDHLNRLFTEWKRYCVTPEELGEYIGRLDGQNSSLVLQQKLQDLHHLYGAFESRLSGE 177 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFI-CGISALPPVYLQALQALGK-HIEIH 237 + + L + S F G P L+ ++AL K + Sbjct: 178 YLDG-------EDTLSLLAEQIPQSSFIRSATFWMDGFHGFTPQELRVVEALMKTSRGVT 230 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 + T YY G+ D L + + Sbjct: 231 VTLTLDRPYYAGERPDELDLF---------------------YPTGKTMSSLQELL---- 265 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 A+ G + I+L +L ++ + Sbjct: 266 -DQANIG--PAELIHLQPKKAP--------RYEHTTMLAYLEQHY-----------DKRI 303 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + +S + + + EVE +L ++ + RD+ V+V +++ Sbjct: 304 GIGVCTYSSDEDKESPLQIRAAVNRRAEVEGTAREILHLV-REQGARWRDVAVLVRNMEE 362 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 Y I F +P+ +R+ HP+ E S L + + E V + Sbjct: 363 YRELIATTFSDY----GIPHFFDQKRSVFHHPLSEYLRSALEVISRNWRYEAVFRCVKTD 418 Query: 478 VLAARFDITEEG-------------------LRYLRQWVNESGIRWGIDDDNVRELELPA 518 L E L L + GI+ + +L Sbjct: 419 FLLPWPLPVEPDSEGEKLLKEREAIREQRRLLDRLENYALAFGIQGRDWTETKPWDKLFK 478 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + + +E + + + L Sbjct: 479 VSLEDEDSEVVKQRESRELEQLNRTRNQIAEPLLALQKRMARAKTVKQRCEALYRLLLDT 538 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 LE W C E + ++ + + + + L L Sbjct: 539 HVPERLESWSMNCV------LEGKPEKAREHAQLWDSVIQMLDQMVEMMGEEVLSLDLFA 592 Query: 639 DELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 + L+ ++ + V + ++ RS K +LG+N+GV P + G Sbjct: 593 KLVDTGLESIQMGLVPPSLDQVLVGSMDRTRSTRIKYAVVLGVNEGVIPAAVPEDGVLTE 652 Query: 698 SQKPKRGD---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 ++ D R + D++++ AL +KL +SY + PS LV Sbjct: 653 PERELLLDSGVPMADGGRRKLLDEQFIIYSALSVPSEKLILSYALADE-EGKSLLPSELV 711 Query: 749 QELIDYIGQSHYLPGDEAL--------------NCDESEARVKAHLTCLHTRMPFDPQNY 794 ++L + + + + + L + Sbjct: 712 KQLRNLFPDVKEELVLTEPGVLMDSAEHLPFLAHPERVLSYLAVQLKQWMRGTAIASIWW 771 Query: 795 QPGERQSYAREWLPAASQAG---------KAHSEFVQPLPFTLPETVPLETLQRFWAHPV 845 + + EW S + E L + + ++R+ A P Sbjct: 772 EVYNWFARQPEWRRRLSVMDDSLLFTNKEQKLPESTSRLLYGQKLRASVSRMERYAACPF 831 Query: 846 RAFFQMRLQVNFRTEDS-EIPDTEPFILEGLSRYQINQQLLNALVEQDDAER-------- 896 F L++ R E PD LS++ + E Sbjct: 832 SHFASYGLRLQERKIYRLEAPDIGQLFHAALSQFANQLRTEQVEWAGLTPEECGRRSSLV 891 Query: 897 ------LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG- 949 + Y + + L + MEID Sbjct: 892 MDQLAPRLQGEILLSSKRYHYIASKLKQVVTKAAVVLGEHAKRGEFKPLGMEIDFGPGKD 951 Query: 950 -------------VQITGWLPQVQP---DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN 993 ++I G + +V L R + E + Sbjct: 952 LPPLVFQLDNGCTMEIIGRIDRVDQAEGSEGLLLRVIDYKSSAASLNLAEVYYGLSLQML 1011 Query: 994 GESRLFLRKDGEWRFPPLAAE 1014 + + W P Sbjct: 1012 TYLDVIITHAKTWLGIPATPA 1032 >UniRef50_C5RQN7 ATP-dependent nuclease subunit B n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQN7_CLOCL Length = 1151 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 115/1076 (10%), Positives = 287/1076 (26%), Gaps = 170/1076 (15%) Query: 1 MLRVYH----SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG- 55 ML+ S + + ++ I+ +++ F ++V + L + G Sbjct: 1 MLKFILGRSGSGKSCSIFEEIKKILIKDKNQKIF----MIVPDQFYF-TAEKNLLEFLGE 55 Query: 56 -IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHY 114 + +D + +F +V K L + LL Sbjct: 56 ELCDKVDVLTFKKLGYRVFDQVGGVSKK------------------HLDDAGRSMLLYKI 97 Query: 115 LTDDSDKRKLFQ----------LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAW 164 L ++ + K F + Y + + +GL + Sbjct: 98 LEENKKELKYFSTISNQKGFVSILGDIVSELKNYDITTETLKELYSKIEDNKGLKDKLYD 157 Query: 165 QAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYL 224 + +++ L + ++ ++ V+ S+ + Sbjct: 158 ISLIYEKLRAAMEEKYLDLEDELSILYGKLDEYRDINNA------YVYFDEFSSFTTLQY 211 Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG 284 ++ + ++ + Y D Sbjct: 212 NIIEKILLKAKVLSISLIHSSQYIKSNSDGKI---------------------------E 244 Query: 285 QLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE 344 N V I L D+ + + Sbjct: 245 SYSNEGDVFSVT-----------SKTINKLIDIARKINSPLEYKEIEYKKIKRFNN---- 289 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 +++E+ + + I ++ + E+E + +L + D Sbjct: 290 -----QELIHLEKIYMLIHMKNTKKN-EKINININVNSFNEIEEVAKGILEAV-RDRDFR 342 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 RDI V+ ++DSY I+A+F +PY I ++ +S+ ++ S L + Sbjct: 343 YRDIAVVTRNLDSYDEMIKAIFNEY----NIPYFIDKKKEIESNKLIVFLKSALEIISKN 398 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + E V L + + E + L + +GIR + + + Sbjct: 399 WSEEAVFKYLKSDLTSLSR----EQVDLLENYALANGIRGKRKWT-KETWDYDFPKELSG 453 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 +L +L + S A + + + + + + + Sbjct: 454 GKEKEEILEEINELK-AQVVNPLLKLYDISISKA----KVKEISKIIFQFLQQVGAFEKI 508 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 E W+ R + I + + + L L+ Sbjct: 509 ENWIQGFRTEGKQLL------ANEYSQIWNLIIETLDMLVEVLGDAEMSLEEYEKILSIG 562 Query: 645 LDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 ++ ++ V + ++ ++ K++ ++G+NDGV+PR ++ G + Sbjct: 563 FEENKMGLIPATIDQVLVGSVERSKTNGVKILYIIGVNDGVFPRSVSDEGILNDEDRTVL 622 Query: 704 GD---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 + R+ ++++L E +A ++ ISY + PS+LV L + Sbjct: 623 MENGITLASTTRAAAFEEQFLVYETFTAASDEIIISYPIADF-EGKALRPSILVSRLKNI 681 Query: 755 IGQSHYLPG-------DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW- 806 + ++ + ++ + + + + E+ Sbjct: 682 FKKITIKSDILDVVSMEKVTLPMPTFNQMISAIRAKMEGAEISEYWSEVYKWYHDQEEYK 741 Query: 807 ------LPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTE 860 + + + + + + E + + + P F L+ R Sbjct: 742 LLKDRIMRGFYYSNQGVIKNKEKIKKLYGEDYSVSRFETYVNCPFSYFVNYGLKAKERKL 801 Query: 861 DSE-IPDTEPFILEGLSRY------------QINQQLLNALVEQDDAERL-FRRFRAAGD 906 + D F+ + + I++ ++ E L Sbjct: 802 YNLTTLDKGTFLHNVIENFCISVIKEHASFENIDEDFCQQFSDKVLKETLKIDNSVLNSS 861 Query: 907 LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG--------------VQI 952 Y + + + + ++ S E + N +I Sbjct: 862 NRYQYMANRLKKVLVRTLITITRQINNSDFKPISFEAEFDDNREFRPIEISLKDGTKAKI 921 Query: 953 TGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGE 1005 G + ++ D L R + + L + E Sbjct: 922 KGKIDRIDILKKDDELYIRIIDYKSSSKTINLKDVYYGAQLQLLVYLDAILSYEEE 977 >UniRef50_B8I5U1 ATP-dependent DNA helicase PcrA n=14 Tax=Firmicutes RepID=B8I5U1_CLOCE Length = 785 Score = 276 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 85/714 (11%), Positives = 201/714 (28%), Gaps = 127/714 (17%) Query: 96 MTLLPQLLEREDFTLLRH-----YLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWE 150 M LL L + + +L + L + L+ + A L +Q+ +Y + LA Sbjct: 1 MDLLNGLNKEQKEAVLHNEGPLLILAGAGSGKTRV-LTHRIAYLIEQHGIYPSNILAITF 59 Query: 151 TGHLVEGLGEAQA----------W--------QAPLWKALVEYTHQLGQPRWHRANLYQR 192 T + E A W L + + + + + + Sbjct: 60 TNKAAREMKERIAGLIGDLSNDMWVGTFHSICIRILRRDIEKLGYDRSFVIYDTQDQQVV 119 Query: 193 FIETLESATTCPPGLPSRVFICGISA-----LPPVYLQALQA-------LGKHIEIHLLF 240 E ++ + P + + I + V+ + L A + K +++ Sbjct: 120 IKECIKELSINEKNFPPKSVLETIGKQKDELIDAVHYEKLYASDFRMGKIAKIYKLYEKK 179 Query: 241 TNPCRYYWGDIK----------DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 D P L R R ++ + +L + Sbjct: 180 LKANNALDFDDIIMNTIKLFDKYPEVLDYYQRRFRYILVDEYQDTNTAQYTLVRKLSEAQ 239 Query: 291 G-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA 349 VG+ + +G G + +L F ++ + +N Sbjct: 240 ENLCVVGDDDQSIYGWRGANIRNILD----------FEKDFKKCCTIKLEQNYRSTQNIL 289 Query: 350 VAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 A ++ + + + S I + E + ++ D + Sbjct: 290 DAANHVIGNNTGRKCKSLWTDNKGGSKIVICENDNEHEEALYAAREIQRLI-FDEDRKYK 348 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 D V+ V +PY I + ++ I+ + L + Sbjct: 349 DFAVLYRINAQ-----SRVLEEMFMREGIPYKIVGGQKFYDRKEIKDIIAYMRLVQNPGD 403 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 + + +++VP + I + + Sbjct: 404 NVSLKRVINVP----KRGIGDTTVEN---------------------------------- 425 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 +V+ E + L + + +N +R + + + + Sbjct: 426 ------AEILAYQGDVSLFTVISNAEEFPSLKRAAQKLGNFSLMINKFR-TMKEHMTISQ 478 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ-YGDAVPLSLLRDELAQRL 645 L + + + E + + + + + + + L ++ Sbjct: 479 MLDMVVEDSGILREYELENTVEAQSRIENIKELKSVAIEFEKQSEDNSLEEFLAHISLVS 538 Query: 646 DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 D + S + V + T+ + + F VV + GM +GV+P A Sbjct: 539 DID--SLQEDQDYVVLMTMHSAKGLEFPVVFIPGMEEGVFPGYRAIT-----------EG 585 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQ 757 + +++R L + A++KLY+S + PS + E+ + + + Sbjct: 586 PEQLEEERRLCYVGITRAREKLYLSNARFRTLFGNSSYNRPSRFLAEIPEELVE 639 >UniRef50_B0TDI1 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=ADDB_HELMI Length = 1224 Score = 275 bits (702), Expect = 7e-72, Method: Composition-based stats. Identities = 152/1139 (13%), Positives = 285/1139 (25%), Gaps = 226/1139 (19%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID--FPLP 65 + + ++ P + LV Q + L+ G+ I Sbjct: 13 GKSRACLDEIAQELKGSPQGPPL---LFLVPEQATFQT-ERALATMPGLGGTIRAQVFSF 68 Query: 66 ASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF 125 + + V + + +LR+ L D+ +LF Sbjct: 69 RRLAYRVLQEVGGSARI------------------PIGDLGKRMILRNLLEKHKDELRLF 110 Query: 126 -------QLSSKAADLFDQYLVYRPDWL------AQWETGHLVEGLGEAQAWQAPLWKAL 172 + A + +Y D + L + A L+ AL Sbjct: 111 HRSAGQPGFADALAGALSELKLYNIDATSLDRCQTEVIERQGAGLLADKLHDLALLYGAL 170 Query: 173 VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSR-VFICGISALPPVYLQALQALG 231 + ++ L L V++ G + P L L AL Sbjct: 171 KTFLEGKYTDP-------DDYLHLLAQRIPGSVMLRDAEVWVDGFAGFTPQELSVLAALM 223 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 R DP L D Sbjct: 224 SACR---------RVNVALCLDPTEL--------------------------------DE 242 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 D+ +P R+ L L + + + Sbjct: 243 PCDLDDP-----FFRTRETQAKLLQLAFDRGIVIEKALHLVPAPGQSAPRFQH-----PE 292 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 ++E F P S+ + + EVE ++ + D RD+ V+ Sbjct: 293 LQHLESFYFRRPAPPWLGGTQSLFVCAAANRRSEVEGAAREIIRL-CRDQGYRWRDVAVL 351 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 + D++SY I++VF +P I +R HP++E S L + E V Sbjct: 352 LRDLESYYDSIESVFSD----FGIPLFIDSKRPAPHHPLVELIRSALEAVLRDWAYEPVF 407 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 L ++ T L +V GIR D L Sbjct: 408 RYLKTDLVPLSRGET----DRLENYVLAHGIRGRRWRDREPWLFRRRLTLGEDALSEFSD 463 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 + G S + + L L + W+ Sbjct: 464 QELAELAEINGARDRARAALASFHKAVVGAKAVRPITAALYQLLVDLKAPEQISCWIAEA 523 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 E A + + + + + + L+ + LD ++S Sbjct: 524 EA------AGRIEEAHAHRQVWAAVIDLFDQIVESLGETPLDLATYAVVMEAGLDSLKLS 577 Query: 652 QRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK-------- 702 V + +L R + +LG+++GV P + G ++ + Sbjct: 578 LIPPELDQVFVGSLDRSRCPGIRAAFVLGVSEGVLPARPKDDGIFDDKERERIYALTGLE 637 Query: 703 --RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ--- 757 G R R D+ Y AL A ++ Y+SY + + PS ++ + + Q Sbjct: 638 LAPGSRRRLFDEEYHIYVALTRASERCYLSYPLADA-EGRAQLPSSVIARVRELFPQVTE 696 Query: 758 --------------------------------------------------SHYLPGDEAL 767 L + + Sbjct: 697 RTWLLEPGSLPTGAGLSGSAFAGAATAETAAMAQTALAARTTKEAAMSAVERELAEEYIV 756 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQA--GKAHSEFVQPLP 825 + S + + L R P + + W ++ G H Q LP Sbjct: 757 HPARSLSYLIPSLREALARRPVPLVWWAVYSWLAERPAWRELLARVLSGLWHKNREQDLP 816 Query: 826 FTLPETVP-------LETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIPDTEPFILEG--- 874 + + + ++RF A P F L++ R PD F Sbjct: 817 KPVSRRLFGDPLRASVSRIERFLACPFSHFISHGLRLKERRIFRLAAPDLGEFFHAALKQ 876 Query: 875 ---------LSRYQINQQLLNALVEQD--DAERLFRRFRAAGDLPYGAFGEIFWETQCQE 923 L + ++ L L + D + + +T + Sbjct: 877 FGERLRRDRLDWGALPREELFRLTGEVVSDLAPQLQNEILLSTARHRYLTGRLQQTLSRA 936 Query: 924 MQQLADRVIACRQPGQSMEIDLACNGVQ--------------ITGWLPQVQPDGLLR--- 966 + L + + ++E+ + + G + ++ + Sbjct: 937 VIVLGEHARRGQFRPLALEVGFGPEELLPPVQVPLTGGRWMDLVGRIDRIDGFFVGDASW 996 Query: 967 WRPSLLSVAQGMQLW--------LEHLVYCASGGNGESRLFLRKD-GEWRFPPLAAEQA 1016 R + L+ L Y +RL GE R L+A A Sbjct: 997 LRVIDYKSNRANLKLADIAHGLKLQLLAYLDVALRHGNRLLQGCALGEDRPSSLSAATA 1055 >UniRef50_Q0SWW7 ATP-dependent helicase/deoxyribonuclease subunit B n=9 Tax=Clostridium perfringens RepID=ADDB_CLOPS Length = 1158 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 118/1073 (10%), Positives = 289/1073 (26%), Gaps = 181/1073 (16%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTL-SQKFGIAANI 60 L++ + ++++ + P ++LV Q L + N Sbjct: 3 LKIIYGRAGTGKSTFCINQIKKKINNSPTNKLILLVPEQFTFQTENKVLNAIGERYVLNA 62 Query: 61 DFPLPASFIWDMFVRVLPEIP-KESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 + ++F K + +K++ L D + + Sbjct: 63 EVLSFKRLAHNVFNECGGATRTIMGDAGKSMLIFKVLEDL------GDNMTVFKNASR-- 114 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 ++ ++SK F +Y V + L E L ++ Sbjct: 115 -QKGFIDIASKTITEFKKYNVNN-EVLDLTINEIEDENLKMKMEELKDVFNEFN------ 166 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 + L++ +++ + L G Sbjct: 167 -------SRLHEGYVDEEDQLLLLNEKLDGCSLYDG------------------------ 195 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 W D +L + E SD N Sbjct: 196 -----AEIWIDEFSSFTPNQLSVIGKLLKKAKSVNITLSIDEVNSPKVESDLFVATKNT- 249 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 + + L+ + + N+ DI +IE Sbjct: 250 -------EKRLMNLIQEEGIAFNGY-----------INLNEDIPYRFKENKELAHIERQL 291 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 + + ++S+ + ++ E+E + +L ++ + +DI V+ ++D+Y Sbjct: 292 YAYPFKQYRGENNSLRLYRANNNYDEIEFVAKDILRLV-REKQYRFKDISVICREVDNYE 350 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 I A+F +PY I + S+P++ S + + + E + L ++ Sbjct: 351 KVISAIFAEY----EIPYYIDKKIDIASNPLIVFINSAVDIISKNWTYESMFKYLKTGLI 406 Query: 480 AARFDITEEGL-RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 I L L +V GI+ + + + L E Sbjct: 407 KEFRGIEGAELIDELENYVLAYGIKGKKWMEEWVNYSSSILKEEEISEENKQRL-----E 461 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR-GLAQERPLEEWLPVCRDMLNA 597 ++++ + + L + L + L +++++ ++ A Sbjct: 462 RLNDIRETIVTPLDEFNKECKGKKTLKEFAIILYEFLDSKLNIMDTIDKYVEYFKENDMA 521 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA- 656 + + + ++ + + + + L L L Q + +A Sbjct: 522 I------EAKEYSEVRDIFIDVLEQAVDVLGNEVMDLDEFMKVLNIGLSQYEMGLIPVAL 575 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD---------RS 707 VNI + ++S K + ++G+NDGV P G + + + R+ Sbjct: 576 DQVNIGDITRIKSRGTKALYIIGVNDGVLPSASKEEGILSDNDREILLEKGISLASDTRT 635 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG---- 763 + ++++L A A++ L ++Y + + PS++V L + Sbjct: 636 KIFEEQFLVYTAFTIAEEYLVVTYPLADF-EGKSQRPSIIVHRLKKILPNVKEESEGFKL 694 Query: 764 -----DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK--A 816 D+ + + + + D + +W K Sbjct: 695 VNDKYDKISAKIPTLNELMIAIRKNYDGAEIDDYWKYVYDWYLREPKWKERIEYVRKGLE 754 Query: 817 HSEFVQPLPFTLPETVP----------LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 ++ + + + + L+R+ P + Q L+ R Sbjct: 755 YTNLENNISKEKAKKLYEDNKNKISLSVSRLERYAQCPFAYYIQYGLKAKDRKIYEF--- 811 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDAERLF------------------------RRFR 902 ++L+ + + L + Sbjct: 812 ------TAPDLGSFMHEILDEFTNEIKEKDLKWSDLSKENCKNIINSLVDNQVKNNKSSI 865 Query: 903 AAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACN 948 Y F + F + + +++++ E+ + Sbjct: 866 LNSSKRYSYFTDRFKRILTKSVMVISEQMKRSDFEIYKNELAFGFSKDVNSIKLDLPSGE 925 Query: 949 GVQITGWLPQVQP---DGLLRWRPSLLSVAQGMQLW--------LEHLVYCAS 990 + G + ++ DG R ++ LVY + Sbjct: 926 SFYLNGRIDRIDKLNLDGETYLRIIDYKTGSKKFDLNKFYNGLQMQLLVYLDA 978 >UniRef50_C9LAG6 ATP-dependent nuclease subunit B n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LAG6_RUMHA Length = 1144 Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 107/1075 (9%), Positives = 261/1075 (24%), Gaps = 159/1075 (14%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQM--TLSQKFGIAAN 59 L+ + + ++ +++P + +ILV Q + T+ + GI N Sbjct: 3 LQFIFGGAGAGKSYYLYNKIIQQSIENPKKQYLILVPEQFTMQTQKELVTMHPRKGIC-N 61 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 ID + + + +SM +L ++ + + L L Sbjct: 62 IDVLSFERLAFRVLTEMGESQRTLLEETGKSM------VLRRVAQEKKKEL--KILGAKM 113 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 DK+ QY + D E L L++ +Y Sbjct: 114 DKQGYVSQMKSMVSELRQYEISTEDLEDVLEDLSSSPELYYKLQDIKTLYQGFFDYLEGS 173 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRV-FICGISALPPVYLQALQALGKHIEIHL 238 + ++ + L V + G + P Sbjct: 174 FIT-------QEEVLDAMGRVAPQSKKLKDSVLVLDGYTGFTP----------------- 209 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 +LL E E+ ++ + + Sbjct: 210 -----------------IQLQLLETLLEICEEVYVTVTVAAGEDPYKMGSPHELFYLSRQ 252 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 +AS ++ +D + + + DN +E+ Sbjct: 253 TVASLLRIAKDKKISWKEYWIPEGRGEYQGRFKDN----------------PPMAFLEKN 296 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 ++ ++ + +P E+E+ + ++ RD V+ D+ Y Sbjct: 297 VFRYRRKKYPKQQDAVQIYEAQNPASEMEMTAGEIRRLV-RTKGYRYRDFAVITGDMQVY 355 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 +P F +P I ++ + +P +E + + + F E + +L + Sbjct: 356 APAAARAFARY----EIPCFIDEKHSVFLNPFVEYLRAAVDMIVENFSYESIFRMLRCGL 411 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 DI+ E L +V GIR + Sbjct: 412 ----NDISTEEADRLENYVIAMGIRGFSRWQQEWVRSYRGENPEECVQ---------IDK 458 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 + P+ + + + L + + L+E+ Sbjct: 459 IRASLVEKWEPFYKKMKTPDAS---VRTYTEALYQYITANKIQEKLKEFTRNFEA----- 510 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-AG 657 + + I + ++ + + V + ++ L L + ++ + Sbjct: 511 -EGNLSLVKEYSQIYEIVMNLLDKLVEILGDKKVRIREFKEILEAGLSEAKVGIIPPTSD 569 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR-------------G 704 V + + R K+V +G+N+G P++ + + Sbjct: 570 QVLVGDMERTRLKDIKIVFFVGVNEGKIPKEQQAGKLLSDLNREELKGSLKERGLSLAPT 629 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 + ++ L ++ R PS LV ++ + D Sbjct: 630 AKENLYTQKFYLYLNLTKPSER-IYLSYSRLSSSGEAMSPSFLVAQIQKLFPDAVREW-D 687 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP- 823 L + + + + P + + +E+ ++ A Sbjct: 688 VPLFAESKYGALDRLSEEMRKQDRTSPVFEELMSWFTSQKEYGELVNRLIDAAYYVNPQE 747 Query: 824 --------LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI-PDTEPFILEG 874 + + L++F F L + R D + Sbjct: 748 SISKGVAEALYGTELSNSASRLEQFAKCACSHFLSYGLMLRERVRYEFSMADMGTLLHNS 807 Query: 875 LSRYQINQQLLNALVEQDDAERLFRRFRAAG----------------DLPYGAFGEIFWE 918 L + +++ D E R A Sbjct: 808 LDLFA--RKVREQGKSWVDLEDEERDTLAEDCVTEVVEKSGETILLSSARNAYTINRVKR 865 Query: 919 TQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQITGWLP----QVQ 960 + + L ++ E + + + G + Sbjct: 866 MVKRSVWALQKQLKQGEFYPALTEWAFGEKDNIDSLNFDLESGQKLHLKGRIDRIDVCQD 925 Query: 961 PDGLLRWRPSLLSVAQGMQLWLEHLV-YCASGGNGESRLFLRKDGEWRFPPLAAE 1014 + L + ++ + + + + Sbjct: 926 KENHLYVKVIDYKSGTTQLDLIKLYYGLQIQLALYLNAALELEKKRFPDKFVQPA 980 >UniRef50_Q6GFF2 ATP-dependent DNA helicase pcrA n=81 Tax=cellular organisms RepID=PCRA_STAAR Length = 730 Score = 272 bits (695), Expect = 5e-71, Method: Composition-based stats. Identities = 76/692 (10%), Positives = 188/692 (27%), Gaps = 117/692 (16%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA----WQA--------------PL 168 L+ + A L D+ V + LA T + E QA L Sbjct: 37 LTHRIAYLLDEKDVSPYNVLAITFTNKAAREMKERVQKLVGDQAEVIWMSTFHSMCVRIL 96 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQ 228 + + + + L++ R+FI IS L Sbjct: 97 RRDADRIGIERNFTIIDPTDQKSVIKDVLKNENIDSKKFEPRMFIGAISNLKNELKTPAD 156 Query: 229 ALGKHIEIH-LLFTNPCRYYWGDIKD--------------------PAYLAKLLTRQRRH 267 A + + H + Y + P L + + Sbjct: 157 AQKEATDYHSQMVATVYSGYQRQLSRNEALDFDDLIMTTINLFERVPEVLEYYQNKFQYI 216 Query: 268 SFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAF 326 ++ + L + VG+ + +G G D +LS F Sbjct: 217 HVDEYQDTNKAQYTLVKLLASKFKNLCVVGDSDQSIYGWRGADIQNILS----------F 266 Query: 327 VDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSPQ 383 P+ ++ + + A + + + + I ++ + + Sbjct: 267 EKDYPEANTIFLEQNYRSTKTILNAANEVIKNNSERKPKGLWTANTNGEKIHYYEAMTER 326 Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 E E + + M + +D+ ++ V +PY + + Sbjct: 327 DEAEFVIREI--MKHQRNGKKYQDMAILYRTNAQ-----SRVLEETFMKSNMPYTMVGGQ 379 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 ++ +S L + + + +++VP + + + ++ + ++ I Sbjct: 380 KFYDRKEIKDLLSYLRIIANSNDDISLQRIINVP----KRGVGPSSVEKVQNYALQNNIS 435 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 L + GL ++ Sbjct: 436 MF----------------------------------------DALGEADFIGLSKKVTQE 455 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 + + + + E + + + E + ++ Sbjct: 456 CLNFYELIQSLIKEQEFLE-IHEIVDEVLQKSGYREMLERENTLESRSRLENIDEFMSVP 514 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 + + L + L I + V + T+ + + F +V ++GM + Sbjct: 515 KDYEENTPLEEQSLINFLTDLSLVADIDEADTENGVTLMTMHSAKGLEFPIVFIMGMEES 574 Query: 684 VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER- 742 ++P A GD ++R + A+ A++ LYI++ + + Sbjct: 575 LFPHIRAIKS---------EGDHE-MQEERRICYVAITRAEEVLYITHATSRMLFGRPQS 624 Query: 743 -FPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 PS ++E+ + + ++H + + Sbjct: 625 NMPSRFLKEIPESLLENHSSGKRQTIQPKAKP 656 >UniRef50_Q2RL78 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=ADDB_MOOTA Length = 1151 Score = 272 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 157/1086 (14%), Positives = 275/1086 (25%), Gaps = 182/1086 (16%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGI--AANIDFPL 64 S + + ++ I+ +IL Q +++ L + G+ + + Sbjct: 12 SGKTRLCLEEIKAILAEGPAGPAL---IILTPEQATLQ-MELDLHRAAGVPGFSRVQVLS 67 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 W +F P L E LR ++ D L Sbjct: 68 FRRLGWRVFQEAGGAAR------------------PHLGEMGKAMALRAVVSAHRDDLGL 109 Query: 125 F-----------QLSSKAADLFDQYLVYRPDWLAQWET----GHLVEGLGEAQAWQAPLW 169 F QL+ A+L Y V D E G L A ++ Sbjct: 110 FAPLAGSPGFIEQLAHTIAEL-KLYRVTPADLDRILERYRETGREQTILARKLRDLALVY 168 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLP-SRVFICGISALPPVYLQALQ 228 + L Y ++ L + +RV++ G + P LQ Sbjct: 169 RELETYLAGRYLDP-------DDYLTLLAGRLPEAAFIRGARVWVDGFNGFTPQEEAVLQ 221 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 AL E + DP + L R A + Sbjct: 222 ALMAVAEQVTVTL---------CLDPTLRHRRLGETELFHPTGETYHRLRQLALAAGVRV 272 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR 348 D G P F + Sbjct: 273 EDDVCLAGTP-------------------------PRFRE-------------------- 287 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 A A ++E RP + I + + EVE +L + + L+ R + Sbjct: 288 APALAHLEAHFGRWPLRPFRGDAAGIRLVAAANRRVEVEAAAREILRL-AREENLSWRQM 346 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V+V D++ Y I F +P I RR HP++E + L + + Sbjct: 347 AVLVRDLEPYHDLIVNTFRD----FNIPLFIDRRRPVGHHPLVELVRAALEAVLEDWAYD 402 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 V L ++ E + L +V GIR D+ + T Sbjct: 403 PVFRYLKSDLVPVPR----EEIDLLENYVLAHGIRGRRWRDSRPWQYGNSRDLETPSPPG 458 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 + ++ G + + L + L L Sbjct: 459 SAAGETINAIRE----RASCHLRRFDGALRGRQLTGREITAALFDLLQELGVPERLA--- 511 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 A D + I + ++ E + A ++ L L L+ Sbjct: 512 ---AWSRQAAAAGDLDAAQEHEQIWEGLMDLLEELVLALGDTSLELEEYAAILDTGLESL 568 Query: 649 RISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 ++ A V TL R + +LG+ +GV P +L ++ + Sbjct: 569 KLRLIPPALDQVVAGTLDRSRQPELQAAFVLGVGEGVLPARLPEDATFSDREREELRAAG 628 Query: 708 ---------RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 R + +L AL +++ L++SY + PS LV+ L + Sbjct: 629 LELAPTGTLRLFHEEFLAYLALTRSRRYLWLSYPLADA-EGKALSPSPLVRRLRQLLPGL 687 Query: 759 HYLPGDEALNCDE--------SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 L + L P P + Sbjct: 688 REETAGTELPGGDDDLVYLTTPRQAAGHLARLLGRGRPLPPLWQEVYRWLHQDARGQKML 747 Query: 811 --------SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 + + P + + L+ F P R F L + R Sbjct: 748 GLLEGGGYRNQVDPLEPELARGLYPRPLRLSISQLETFAGCPFRYFLSYGLGLQERRLYQ 807 Query: 863 EIPD-------------TEPFILEGLSRYQINQQLLNALVEQ--DDAERLFRRFRAAGDL 907 P E GL +++ A++ Q D + + Sbjct: 808 VDPAGMGQFYHAALKLFVEELGRRGLDWGRLSDNEAAAIISQVVDSLAPALQHEILSSSA 867 Query: 908 PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQIT 953 YG + +T + M+ L + ++E V + Sbjct: 868 RYGYLRKKLEQTLQRVMEVLNEHARRGEFRPLAVETSFGCRGKLPPLQLDAGPGRRVFLE 927 Query: 954 GWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPP 1010 G + ++ G R + VY L D Sbjct: 928 GRVDRIDVARRQGRPYLRVIDYKSSPTTLDLT--AVYYGLALQLPLYLRAALDAAPELLG 985 Query: 1011 LAAEQA 1016 AAE A Sbjct: 986 EAAEPA 991 >UniRef50_A5ZAT7 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZAT7_9FIRM Length = 1144 Score = 272 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 113/1018 (11%), Positives = 282/1018 (27%), Gaps = 139/1018 (13%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG-IAANIDFPLP 65 + + L + + R + + +V + + L+ + NI+ Sbjct: 12 AGKSHYLYEKLIEKSLKYRNKN----FIAIVPEQFSMETQKQILTMHPNRGSFNIEVTSM 67 Query: 66 ASFIWDMFVRVL-PEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 + +F E K + K+M Q ++ + + ++K K Sbjct: 68 TRLAYTVFEEQGFNEYKVMDDLGKTLIMRKVME---QCKDKLTIYKSKTSMPGFAEKMK- 123 Query: 125 FQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGL-GEAQAWQAPLWKALVEYTHQLGQPR 183 F QY + D L + + L + A EY + Sbjct: 124 -----TIVSEFKQYGIT-DDVLNNMKAECDSKPLLRHKLNDVEIISDAFNEYIKEKVITT 177 Query: 184 WHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI-EIHLLFTN 242 ++ ++I + + + +I G + P+ Q L+ L KH + + T Sbjct: 178 EDVLTIFCKYISSSDFIKN------TYFYIDGFTGFTPIQYQVLELLIKHCAGVKIAITL 231 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS 302 P ++ + S+ + + + L Sbjct: 232 P-------------------------EDEFQSLRNAYSKGNNAISKYELFNLSKDTL--- 263 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 +D I +++E + + P I + + N+ + S Sbjct: 264 --WKLKDIINR-NNIEQQETVIVGEGQAPY--------RIRDNKELTFLEKNLFRNNSSK 312 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 ++ H +P+ E + R+ ++ D DI V+ D+D Y +I Sbjct: 313 ----YRENCKALEVHSMSNPREEAAYVAGRISELIV-DKGYRYNDIAVITGDMDGYYRYI 367 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 + +P I + S+P ++ + + + + F E V L+ + L Sbjct: 368 ----EEEFSKNNIPAFIDHKHNIASNPFVDGIKAAIEIVEKDFSYETVFHLIRLGFLPID 423 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 E + + +V +SG R + W M Q Sbjct: 424 R----EAVDIMENYVLQSGRRG------------FKSYGRLWEKAYKGMTAEELDMVNQA 467 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 + V + + + + + + +R ++++ ++ + Sbjct: 468 REKLVEIIRPLREELKKKKATVREYTKAVYQFVQANNMQRQIDDYRIEFQN------QGE 521 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNI 661 + ++ + + + + + L + ++ V + Sbjct: 522 ISRAKEYEQVYVTIITLLDRIVELMGDEVLTIKEYKQILQAGFESVKVGIIPPGLDTVMV 581 Query: 662 CTLMPMRSIP-FKVVCLLGMNDGVYPRQLAPLGFDLMSQKP---------KRGDRSRRDD 711 + R +++ +G+NDG+ P+ G + + Sbjct: 582 GDIERTRLKDTKRIIFFMGVNDGIIPKAGQAGGIITDTDREFLEKNNYILAPTATDNVFK 641 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 ++ +K+ I++ +S D + R S ++ L++ + DE+ Sbjct: 642 QKFYLYTIFAKPTEKMCITFS-KSGSDGATRRKSYIISTLMNLFENLKIIDEDESEITLN 700 Query: 772 SEARVKAHL------TCLHTRMPFDPQNYQPGERQSYAREWLPA---------ASQAGKA 816 L +++ + +E+ S Sbjct: 701 QVTTRSKALDYLSQNIYEYSKEGDSGIFKELMATVMKNKEYSKVINLMFDGAFYSAKNPI 760 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILEGL 875 E V + E + + L+RF A F L++ R + D + Sbjct: 761 LDENVARQLYGNKENIGITRLERFAACAYSQFLNNGLKLGERKKFELAAFDIGNLYHSAI 820 Query: 876 SRY-------QINQQLLNALVEQDDAERLFRRFRAA-------GDLPYGAFGEIFWETQC 921 + I L+ ++ + + +T Sbjct: 821 KEFFDTINTNNIKWADLDDKKSENIINDSIEKVMEQYENDALNDIARSAFIKKQVKDTST 880 Query: 922 QEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ 979 + + L + + + E+ +A V + + + + + Sbjct: 881 ETVNALVKHIRSGNFLPREYELRIAHGRV---DRVDTFEDGNNIYVKVIDYKSGNKVF 935 >UniRef50_Q24WW7 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Desulfitobacterium hafniense RepID=ADDB_DESHY Length = 1220 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 154/1065 (14%), Positives = 281/1065 (26%), Gaps = 166/1065 (15%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF--GIAANIDFPLP 65 + + + + P ++LV Q ++M+L+ G Sbjct: 13 GKSTLCRQEIHKESQEHPEGLPL---ILLVPEQATHQ-MEMSLAHDPQSGGILRAQVLSF 68 Query: 66 ASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF 125 W +F V + + ++L R R L + Sbjct: 69 RRLGWRVFSEVGGGGKAV-----------IGEVGKRMLLRRLLLNHRSDLRVFARSATRP 117 Query: 126 QLSSKAADLFDQYLVYR--PDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPR 183 ++ A ++ +YR PD L E + L + A L++ L + + Sbjct: 118 GMADLLAQAIAEFKIYRITPDQLRGIEDADEL--LLQKTHELAFLYEELNKSLGTAARDP 175 Query: 184 WHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA-LGKHIEIHLLFTN 242 NL I P +++++ G P L +QA LG EI + Sbjct: 176 DDELNLVAGKISQ------APFLQGAKIWVDGFKGFTPQELYVIQAMLGTAAEITVSLP- 228 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS 302 DP L R + E + + L Sbjct: 229 ---------LDPELLKAGTPRFKPGEELFYEPRQTYQGLVDLAREAKAS---ISHVFLT- 275 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 + + + L+ F + P Sbjct: 276 ------ETHRF--EKAGLKHLERFYNAYPTQT-------------------------FPG 302 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 P I + + EVE + L + + T RD V+ D+ Y I Sbjct: 303 GDDSTAPDPLGIALFPAANKRAEVEGVARELRRL-AREEGRTWRDCSVVTRDLPGYQGII 361 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 + VF +PY + +R HP+LE +S + + E + L Sbjct: 362 EQVFN----AHEIPYFLDHKRPVIHHPLLELLLSAIETVQKDWAYEPLFRCLKTDF---- 413 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 F +++ + L + GI N P GL + Sbjct: 414 FPCSKDRIDRLENYCLAYGIHGSAWKGNRSWSYYPDPNHKEETAGLNE-TRQIIYDLFSP 472 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 Q++ P+ E+ G +A + + L L+EW A D Sbjct: 473 FDQAIRPHPEAGGPS----VTVAQITEAIYELLIRLKVPEHLQEWAEA------AHSRGD 522 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNI 661 I ++ E + + + LS L L+ ++ V + Sbjct: 523 LAEAQLQNQIWDAVIQVLDELVAGLGEEVMDLSDFAMILTSGLENLQLGLIPPGYDQVLV 582 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS---------RRDDD 712 +L R+ V+ LLG NDG+ P + + G ++ + + + ++ Sbjct: 583 GSLDRSRNPETAVLFLLGANDGILPGKPSDEGVFDELERLRLESKGIMLAPKGKVQVYEE 642 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH-------YLPGDE 765 +Y AL A+++LYISY + S ++ L Sbjct: 643 QYFIYTALTRAREQLYISYPLTDE-EGRGLTVSPVIHRLKMIFPGLPEKYLSLDEEEPGA 701 Query: 766 ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 + HL L P P K + + Sbjct: 702 LPHPYALLPAYALHLQKLRQGSSLSPLWQAIRLWFLSQTAAFPQVQLLEKGLRDQNEEGK 761 Query: 826 FTLPETVPL---------ETLQRFWAHPVRAFFQMRLQVNFRTEDSE-IPDTEPFILEGL 875 P L L+ F P F Q L++ R+ PD F L Sbjct: 762 LPQPLARQLYGKRLVTSVSRLELFARCPFAHFAQYGLKLKERSNYRLSPPDMGQFFHAVL 821 Query: 876 SRYQINQQLLNALVE----------------QDDAERLFRRFRAAGDLPYGAFGEIFWET 919 Y I L ++ + + + Y T Sbjct: 822 HDYAI--ALRERGLDWGELSKEQSWQLVNETAEPIALQLQNKILLSNARYRYLTHKLKRT 879 Query: 920 QCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQITGWLPQVQP---D 962 ++ L + +E+ N + + G + ++ Sbjct: 880 VHHAVRVLGEHARQGVFLPMELEVKFGPQEALPPLEVPLSGGNSLLLRGQIDRIDGAVLG 939 Query: 963 GLLRWRPSLLSVAQGMQLW--------LEHLVYCASGGNGESRLF 999 + R + L+ L Y + G L Sbjct: 940 HEIYLRIFDYKSREAHVSLNQIYHGLDLQLLAYLDAALQGAQILV 984 >UniRef50_C0Z546 ATP-dependent nuclease subunit B n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z546_BREBN Length = 1165 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 113/1065 (10%), Positives = 268/1065 (25%), Gaps = 187/1065 (17%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLS--QKFGIAANIDFPLP 65 + + + M+ + + L P ++LV Q + L+ + G Sbjct: 13 GKTESIHRQMQARLREKPLGSPM---ILLVPEQASFQE-EYALATLPELGGVIGTQVLSF 68 Query: 66 ASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF 125 + + + + +LR L ++ +F Sbjct: 69 GRLAHRLMQELGDLTTV------------------PVDDLGKHMVLRMLLERHKEELNVF 110 Query: 126 Q-------LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQ 178 +++ L + Y + L + + A Y + Sbjct: 111 GRSATQPGFAAQLGRLISECKSYGVSFTHSENVEWGGANLNQKIHDLRLIMNAYEAYLSE 170 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSR-VFICGISALPPVYLQALQALGKHIEIH 237 + + + + +FI G + L+ ++ L +H + Sbjct: 171 GYCDA-------DDILNRVATMVRDSMYIKQAEIFIDGFTGFTNQELRLIEQLMQHAKQV 223 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 + D L R + E+ + + Sbjct: 224 TIALTLDPNERDASVDELGLFHPTLR-------TYQALTLMARESGVSIAKPLLLTEA-- 274 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 L ++ + + Sbjct: 275 -----------------------------QRFKSSPWLRQVEQVYFQWGDP--------- 296 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 +T + + EVE + +LL + + +D+ +++ +I + Sbjct: 297 -----PIPDQPGRADEVTMLSAVNRRAEVEAVALKLLTL-SREEGYRWKDMAILLREIGT 350 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 Y+ I AVF +P+ + +R+ HP++E S L + +R+ + V L Sbjct: 351 YADEISAVFTEY----GIPHFLDQKRSVMHHPLVELVRSALEVIVTRWRYDAVFRCLKTD 406 Query: 478 VLAA---RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 +L + + L +V G+ +G + + Sbjct: 407 LLLLDITDEHTARKEIDRLENYVLAHGV-FGYQWAEESPWHFRGQAGAEEDAQIDELRRK 465 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 YA + ++ + + L L LE W + Sbjct: 466 YAAPL----------LSFEKEMKQATGLNVQEMTLALYNLLIALDVPNKLEHWQRKAEN- 514 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 D + + ++ + + +++ L+ L L+ + Sbjct: 515 -----DGDLDAAQVHGQVWTGLIELMDQVVEVMGDESMNLATFARVLDSGLETIELGLVP 569 Query: 655 LA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD-------- 705 A V I + R K + LLG+N+G+ P + G +++ + + Sbjct: 570 PALDQVLIGAMERSRQPDVKALFLLGVNEGIIPLRPKEEGILDEAERERLAEMGMSLAPS 629 Query: 706 -RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 + + + YL +A+ ++L +S + PS + + + + + Sbjct: 630 AKQKLMAEPYLLYQAMTRPSERLILSCALADE-EGKALLPSSVFTRIREVLPDIPHQVFY 688 Query: 765 EALN------------CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 + L + ++ + A + Sbjct: 689 NEPTGQYETDAFLLGHPRRVFRHLLTLLRSMKKTGELPDFWWEVYDWYIRASPDVKREQW 748 Query: 813 A---------GKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS- 862 + + + + L+RF + P F L++ RT Sbjct: 749 LLSGLRYFNRPQELDLETSTTLYGKQLKMSVSRLERFQSCPFSHFSSHGLRLAERTMYKL 808 Query: 863 EIPDTEPFILEGLSRY--QINQQLLNALVEQDDAERLFRRFRAAGDLP------------ 908 E D L R ++N+ L +D +P Sbjct: 809 ERFDVGELFHASLKRAVEKMNEDNLEWSKLTEDNSMQLANVVVEELVPATRSSILTRTAR 868 Query: 909 YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQITG 954 Y + + L + R +E+ +Q+ G Sbjct: 869 YRYLSGKLKRAVGRAIYVLGEHAKRSRFAPVGLEVSFGPNSDLPGLALTLENGVELQLIG 928 Query: 955 WLPQVQP---DGLLRWRPSLLSV-------AQGMQLWLEHLVYCA 989 + +V + R + L+ Sbjct: 929 RIDRVDQSLDSEVPYLRVIDYKSSPKQLSLSDVWNGLNLQLLVYL 973 >UniRef50_C9XK50 ATP-dependent DNA helicase n=5 Tax=Clostridium RepID=C9XK50_CLODC Length = 762 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 81/682 (11%), Positives = 184/682 (26%), Gaps = 112/682 (16%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA----------WQA--------PL 168 L+++ A L + V P+ LA T + E W + L Sbjct: 43 LTTRIAYLIEDKGVQAPNILAITFTNKAANEMRERVEQNIGPETKDMWISTFHSCCVRIL 102 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA-----LPPVY 223 K + + + + A+ + L+ + I IS P Sbjct: 103 RKDINKIGYNRSFVIYDSADQVTLVKDCLKELNLSDKVFEPKAVISAISGAKDKLYTPKQ 162 Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLT--------------------R 263 + + + + Y +K + L R Sbjct: 163 ---FKDINMADNRMVKIADIYALYQDRLKRNSALDFDDLILKTVELFKANDEVLAYYRSR 219 Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQE 322 R ++ + E L VG+ + +G G D +L Sbjct: 220 FRYIMVDEYQDTSKAQYELIKLLAREHQNICVVGDDDQSIYGWRGADIRNILE------- 272 Query: 323 LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVC 379 F + + ++ + + A + + I + Sbjct: 273 ---FEKDYDNVHVVKLEQNYRSTQVILDAANKVISNNIERKRKKLWSEKKEGELIKIQLT 329 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 S E + + D + + +D V+ P A +PY I Sbjct: 330 GSEIEEADFIADSIAQ-IARKENRPYKDFAVLYRANAQARPV-----EDALNRSQIPYNI 383 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 ++ ++ L + + + +++VP R I + + Sbjct: 384 YGGTKFYERKEIKDLLAYLRVIQNPQDDISIKRIINVP----RRGIGLRTIEKI------ 433 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 ++ L+ + + A S G + + Sbjct: 434 ---------EDRANLKQESIYSVLIDIETNSDISTKARASISGFVDIIGTLRTIKEVYP- 483 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 ++ L+ ++ L ++E + + E + + + + Sbjct: 484 ----VSKLIEKV------LDTTGYMDELVEIRNKNEKDLTGKGEEAQDRIDNLREFISIA 533 Query: 620 IA-EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + E + L +A + + V++ T+ + + F VV L Sbjct: 534 LEFESSNDDTYENKDLETFLTSIALTSES---NDEEDNDRVSLMTIHTSKGLEFPVVFLT 590 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 GM +G++P A S+ +++R L + A+++LY+S + Sbjct: 591 GMEEGLFPISRAIKSM----------SDSQIEEERRLCYVGITRAKEELYMSLTEKRTLY 640 Query: 739 NSERF--PSVLVQELIDYIGQS 758 S ++EL + + Sbjct: 641 GKTNVAIASRFMEELPEECIER 662 >UniRef50_C7GAA1 ATP-dependent nuclease n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GAA1_9FIRM Length = 857 Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 114/926 (12%), Positives = 257/926 (27%), Gaps = 118/926 (12%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIA-ANI 60 L+ N + V ++ ++ + +I+V Q + + ++ A N+ Sbjct: 3 LQFIFGNSGSGKSDFLYDSVLKQAKENKEQQFLIIVPEQFTMQTQRELVERQKQHAIMNV 62 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 D A + +F + + +++ +L ++ E++ L L + + Sbjct: 63 DVLSFARLAYRVFDDLGKQNVVVLEETGKNL------VLRKVAEQKKAEL--KVLGANMN 114 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLV-EGLGEAQAWQAPLWKALVEYTHQL 179 K QY V RPD LA++ + EGL +++ EY Sbjct: 115 KMGYVGEVKSLISELMQYNV-RPDALAEFLEKEPLGEGLRLKMKDVLTMYQGFTEYLKGR 173 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFI-CGISALPPVYLQALQALGKHIEIHL 238 + +E L L + V + + P+ + ++ L + Sbjct: 174 YITA-------EEVLELLYDVAEESELLRNSVIVLDEFTGFTPIQNRLMEKL----LVLA 222 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 + E+ Q Sbjct: 223 KKVSVS------------------------------VTMDVREDFYQCRGVHELFA---- 248 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV-AGVNIEE 357 + + + L + ++ P L Q + Sbjct: 249 -------MSKKTVASLLKVAELCKVPVEE---PLVLPTGKQRRYANAADLYFMEQNLFRP 298 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + S + + I +P+ E++ ++ + + RDI V+ D+ Sbjct: 299 GAGSYRYKAPEQSMQHIRITSLKNPREELKFAAREIVRL-TRENGYRYRDIAVVTGDVQQ 357 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 Y ++ +F ++PY I + HP +E ++L + + F E V L Sbjct: 358 YGNYVPEIFEQY----HIPYFIDQTKNILFHPFIECIRAILEMIEYDFSYESVFRFLRCG 413 Query: 478 V----LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 + + + +E + + + L G +R Sbjct: 414 LASRVVTEAKNSDKEPDPAATEDLTQQPETGSHGLTEQEIDRLENYVLARGIRGASRWSR 473 Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM-----------QLNIWRRGLAQER 582 + G + + +E + E L +L R L E+ Sbjct: 474 PWTFVMPDGTLEDMARLNEIREAVYENFKPLLEAFRGKDNTVSTQTYELYSLIRRLDMEQ 533 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 L+E + I + ++ + + + + D L Sbjct: 534 LLKERGNFFEA------HGNQARAKEYDQIYKIVMDLLDKVTSLLGDETMTIREYSDILD 587 Query: 643 QRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 + ++ V + + R K++ +G+NDGV P+ G ++ Sbjct: 588 AGFEAAKVGIIPPGNDTVTVGDIERTRLNHVKILFFVGVNDGVVPKAGNQGGIISQFERE 647 Query: 702 K---------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 K G R + ++ + ++LY+++ + D S L+ L+ Sbjct: 648 KMAEYHLELAPGAREKVFIQKFYLYLNMTKPSERLYVTFCRVN-SDGKALRRSYLIGTLL 706 Query: 753 DYIGQSHYLPGDEALNCDESEAR----------VKAHLTCLHTRMPFDPQNYQPGERQSY 802 Q E + + + + + Sbjct: 707 KLFPQLAVEEPSEEETLEGALTAESALPFLMEGLTKPVEDEEAWTALLAWYLSDEGEREK 766 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETVP--LETLQRFWAHPVRAFFQMRLQVNFRTE 860 + AA A K + T+ + L++F A + L++ R Sbjct: 767 VMQLFDAAFGAHKDDAISKAVTKALYGNTLENSVTRLEQFAACAFAHYLSYGLRLKEREL 826 Query: 861 DSEIP-DTEPFILEGLSRYQINQQLL 885 D + L R+ + + Sbjct: 827 QQFASVDMGNIYHDVLERFCKGHRAV 852 >UniRef50_C4Z483 Putative uncharacterized protein n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z483_EUBE2 Length = 1109 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 108/1041 (10%), Positives = 272/1041 (26%), Gaps = 202/1041 (19%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQM--TLSQKFGIAAN 59 L++ + + + E + +P +++V + ++ + GI N Sbjct: 3 LQLILGSSGVGKSHYLYTHIIDESMKNPDRNYIVVVPEQYTMAIQKRLVSMHPRKGIL-N 61 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 ID + +F V + L L + +++ L + Sbjct: 62 IDVVSFERLAYKVFEEVGEDN------------------LEVLDDTGKNLIIKRVLEQNK 103 Query: 120 DKRKLFQ-------LSSKAADLFDQYLVY--RPDWL-----AQWETGHLVEGLGEAQAWQ 165 D+ K F S+ + + L Y +PD + A + L Sbjct: 104 DRLKYFGSNLSNTGFVSEMKSVISEMLQYDIKPDVMQDAAGAAYSDSEGSAALQYKLDDI 163 Query: 166 APLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPS-RVFICGISALPPVYL 224 ++ A EY + + + ++ L S T + + + G + PV Sbjct: 164 VLVYNAFAEYIDKNYITK-------EEILDKLCSKVTESERIKNCEIVFDGFTGFTPVQY 216 Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG 284 + L SE Sbjct: 217 NLMTILLSMCPKI----------------------------------YVSLTIDASEREN 242 Query: 285 QLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE 344 + + + +D + L + + + V ++ I+ Sbjct: 243 SVRGREELF-----------FMSKDCVSKLYKICDEEHVKVLEPVYIAGKAVPGKNVIVN 291 Query: 345 LENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 + +R + +E+ +N + +I + + E+ ++ + Sbjct: 292 VNSRFKNSEELDFLEQNLFRNNSGRFNQKTDNIVIYEGAVAKEELTFAAGEIIRLTRLC- 350 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 +I ++ AD+D Y + +PY + +R +P + A L + Sbjct: 351 GYRYNEIAIVTADMDGYGKLAANI----LKQNDIPYFLDYKRHVTDNPFIAAINGALGII 406 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 ++ + + +L L + E + L + GIR + T Sbjct: 407 ENNYSYDSILGFLRTGMSGMER----EDIDLLDNYCVAVGIRGRGKWHEPWIRKFRGTVN 462 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 +T L + D ++ ++A ++ L + E Sbjct: 463 NTDLEKLNSLRTMITD-----------MLDPLEEVLKSKESNVADMVKALYEFLVREDME 511 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + + + ++ ++ + + V + L Sbjct: 512 QKVSVLNDSEYTG------------DEYVQLYKKVIEVLDKMYALLGSEKVGIKEFNKIL 559 Query: 642 AQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 A + +I V I + R KV+ +G+NDG P++ S + Sbjct: 560 ASGFQEIKIGLIPQTNDCVVIGDIERTRLDNIKVMFFVGINDGNVPKKADSRSVLSESDR 619 Query: 701 PKRGD---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 D R + R+ + + +KLY+SY ++ + + PS +++ + Sbjct: 620 EYLEDKGIVMSASVREKAFTQRFYLYLIMTKSAEKLYMSYAVKN-SEGAALMPSYIIRSM 678 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 + T PQ + A Sbjct: 679 RKMFSHCLK---------------LSYKDTAQQNSYVTIPQAANSFDNTEIAANVDEDII 723 Query: 812 QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI 871 + + + + F P+R + + + + R E F Sbjct: 724 DSLTGGRLVG-----------SVTSFENFAECPLRYYLRYGVDLKEREE---------FT 763 Query: 872 LEGLSRYQINQQLLNALVEQ------------------------DDAERLFRRFRAAGDL 907 ++ + ++ + ++ +++ Sbjct: 764 FSPVNFGVVLHAVIREVCDEIKKNGESYYLISDEKRREMVKRSVAAITDIYQNSILKDSS 823 Query: 908 PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL-----ACNGVQI----TGWLPQ 958 + + + + + +++ E + Q+ + Sbjct: 824 RNSFMIKRMEDLADRTVWAMGEQLKCGDFVPFVFEHKFNMEVGDGDRKQLMSGTIDRVDI 883 Query: 959 VQPDGLLRWRPSLLSVAQGMQ 979 + + R + Sbjct: 884 CENGTDVYVRIIDYKTGKKDF 904 >UniRef50_A8MLJ7 ATP-dependent DNA helicase PcrA n=3 Tax=Firmicutes RepID=A8MLJ7_ALKOO Length = 739 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 75/699 (10%), Positives = 189/699 (27%), Gaps = 127/699 (18%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA----------WQA--------PL 168 L+ + A L ++ V LA T + + E W + L Sbjct: 51 LTHRIAYLVEEKGVSPYHILAITFTNKAAKEMKERVEALLGDYHRDLWVSTFHSSCVRIL 110 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA-----LPPVY 223 + + ++ + + + L+ R+ + I + P Sbjct: 111 RMEIDKLGYEKNFVIYDTTDQQVLMKDCLKKFNLDEKLFQPRMILNEIGRAKDLLIGPNE 170 Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLT--------------------R 263 L+ G + R Y +K L + Sbjct: 171 Y--LEEFGN-DFRNQKIAEIYRLYQDRMKSNNALDFDDLIMKTVQLFQTHPTVLRYYQNK 227 Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQE 322 + ++ + L S VG+ + +G G D +L Sbjct: 228 FKYILVDEFQDTNMAQYTLISLLAKSHGNLCVVGDDDQSIYGWRGADIRNIL-------- 279 Query: 323 LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVC 379 F P+ + ++ + ++ A + +S + I ++ Sbjct: 280 --GFEKDFPNTQVVKLEQNYRSTKSILDAANMVVANNTDRKSKKLWTDNQDGEIIQYYRA 337 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 ++ E + + + E+ + ++ R +PY I Sbjct: 338 NNEYDEASFISGTIEKL-NEEENRPYSEFAILYRTNAQ-----SRALEEMLMKRAIPYKI 391 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 ++ ++ L ++ V +++VP + I + + Sbjct: 392 YSGTRFYDRKEIKDILAYLRTIENPVDDVSVKRIINVP----KRGIGIKSIDRF------ 441 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 YA + + ++L D+ Sbjct: 442 ---------------------------------DEYAEGKNESFFGALLHVDQMPDQSTR 468 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 + + R E + + + + AE + + Q Sbjct: 469 VKVQTNKFTELIQSLRDR-QDEMSVTDIVKEIYEKTGYIDALMAEDKIEAESRIENLQEF 527 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 ++ + + + + L + LA+ + + + V + TL + + F VV + G Sbjct: 528 LS--VTKDFDENSEVKTLEEFLARTSLETTLDENDEENTVTLMTLHSAKGLEFPVVFIPG 585 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 M + ++P ++ + +++R L + A++KLY+S+ Sbjct: 586 MEESIFPSAMSLQ-------------ENNLEEERRLCYVGITRAREKLYMSHAMTRTLYG 632 Query: 740 SE--RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 S + E+ + + Q + + + + Sbjct: 633 RTNANPISRFLGEIPEELIQIDRPYNRKRDLKEMQTSPL 671 >UniRef50_B6G1B7 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1B7_9CLOT Length = 1158 Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats. Identities = 118/1083 (10%), Positives = 296/1083 (27%), Gaps = 170/1083 (15%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIA-----ANIDF 62 + + + ++ E P +IL+ + ++ +S F + Sbjct: 13 GKTEYMLNEIKQKAVLEEEKSPI---IILIPEQYTYE-MEKRVSNMFASGAKDKYMRVRP 68 Query: 63 PLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKR 122 + +F + ++ + L S Sbjct: 69 MGLKTLSDLVFSYCGNLSKVG-----------INAAGKAIITHNSIEAVSKDLELFSKSY 117 Query: 123 KLFQLSSKAADLF---DQYLVYRPDWLAQWETGHLV--EGLGEAQAWQAPLWKALVEYTH 177 ++ +D+ Q+++ E L A +++ + H Sbjct: 118 AQPGFTTAISDMISELKQFMITPDRLDEIIGESGDTLPENLIMKLKDIAKIYREFEKKLH 177 Query: 178 QLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIH 237 + R + I ++I G ++ P + L+ L K + Sbjct: 178 EDYVDMHDRVVMLTEKIAECSFLDDMD------LYIDGYTSFTPNQYELLKELMKKAKST 231 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 + + + + + +G + + Sbjct: 232 TFLFT-----------------MDSPFKTGYADYFAST-RNTYNRIKDICEKEGIKVEKD 273 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 L + + + F+ L + Sbjct: 274 VNLCN------------------ENIKRFIGNEELQHLERYYNSY--------------- 300 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 I + EVE + + + + +DI + +IDS Sbjct: 301 -----PYSIYQKKTEKIRIREYSNLYNEVEEVAKEIANDIIDGR-YRYKDITIAARNIDS 354 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 Y ++++F +P+ I+ + +++P++ IS+L + R+ E + L Sbjct: 355 YESLVKSIFSEY----KIPFYINKKSEAKNNPIITMIISVLEMKKRRYGYETMFRYLKSG 410 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 +L D TE+ + L +V +GI ++V E LP + Sbjct: 411 LL----DFTEDEISLLENYVIANGISGNKWFEDVWEYRLPNSFYEYEESEEELETKKRIN 466 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + + +DE L ++ + + L + + +E + + R+ Sbjct: 467 DIKNRVIAPIKRFDE--KLSSKNRKTVEDICRYLYEFLEDINIFEKIENTIDILRE---- 520 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA- 656 E+ A + + ++ + + + + L + LD+ + + Sbjct: 521 --KGMLESAARYSQVWNTVSDLLDQLVEIMGDEKISLERFIRIVNIALDEYELKTIPPSI 578 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD---------RS 707 V + + M + K + L+G DGV+P G S + K D R Sbjct: 579 DQVTVTEVDRMNNPNTKHLYLIGTVDGVFPMPSKENGLLSDSDRGKLSDMNVELDKDSRK 638 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG----------- 756 R ++++L +A+ + KL +SY + + S+++ + Sbjct: 639 RVFEEQFLVYKAITATSDKLTVSYPIAD-SEGKTQRASIIISRIKKLFKYVDIKSYFLEG 697 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRM---PFDPQNYQPGERQSYAREWLPAASQA 813 E + + + + + E + + Sbjct: 698 VYEEEDLKEVNSKIPTFNTMVDKIKEAADKDFENGISDIWKDTYEYYLNDDRYNDITKRI 757 Query: 814 GKAHSEFVQPLPFTLP--------ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE-I 864 + Q +T+ + L+++ + P F + ++ R E Sbjct: 758 VEGIDFTNQFEYVDEDKIKELYNSKTISVSRLEKYASCPFAYFIEYGMKAKDRKEYLFTA 817 Query: 865 PDTEPFIL------------EGLSRYQINQQLLNALVEQDDAERLFRR--FRAAGDLPYG 910 PD F+ +G++ ++++ + + V + E + + F Y Sbjct: 818 PDVGSFVHKVIENYSKTMHKDGITWHEVDDKYIELRVSEMVDELIAKIPGFILESSPKYK 877 Query: 911 AFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQITGWL 956 ++ +AD++ R E++ V++ G + Sbjct: 878 YLAHRLKVLITVSIKIIADQIKQGRFEPDDYEVEFGKKRKYPSIQVEYKENEIVELIGKI 937 Query: 957 PQVQ----PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLA 1012 ++ + R + + L P+ Sbjct: 938 DRIDKYINEENKEFVRIVDYKWGKNDINLNDVYYGLQLQLLVYMDAILEGGEIPDNIPIK 997 Query: 1013 AEQ 1015 Sbjct: 998 PAA 1000 >UniRef50_D1BPP0 ATP-dependent nuclease subunit B-like protein n=3 Tax=Veillonella RepID=D1BPP0_VEIPT Length = 1185 Score = 265 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 153/1126 (13%), Positives = 335/1126 (29%), Gaps = 201/1126 (17%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF--GIAAN 59 + VY+ + + + D P EP ++LV + ++ L++ Sbjct: 3 ISVYYGRAGSGKTRAVYERIRQVMTDCPGEPIILLVPEPATYR-VERELAECMPEKGFTT 61 Query: 60 IDFPLPASFIWDMFVRVLP---EIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLT 116 + + ++ + S+F + + +M + L Sbjct: 62 VRVVGFGRLGYQVYQSIGSKGVGQSSLSSFGRSMLLRLVMK------------RKQKELG 109 Query: 117 DDSDKRKLFQLSSKAADLFDQYLVYR--PDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 K + SS LF ++ +R PD L + L + A A E Sbjct: 110 LLEQATKRLEFSSVLQQLFSEFRAFRVGPDDLERGAEFVKNNVLQKKLRELAICMSAYEE 169 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 + G+ +E +E+ P S VFI G P + + + L Sbjct: 170 ELSRHGERDIDP------IMEIVEALPQSPLMENSHVFIDGFHWFTPTHYELIYTLFDLS 223 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 + ++ D+ L R + Sbjct: 224 KEAVITI--------DLPMAPKALNLARRGEHLF---------------------SRPLE 254 Query: 295 VGNPLLASWG----KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV 350 + + L+A +G +G F ++ ++S+ Sbjct: 255 IYDTLVARYGSSINWVG------------------FDGKRGPQIVRELESNYF------- 289 Query: 351 AGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV 410 + + D +I ++ +RE + + +LA +E RD+ + Sbjct: 290 -----------ISPSKKNSTDETIPLIRGYNREREADAVARGILAYVESSEEARYRDVCI 338 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 M+ + ++Y ++ VF +P+ I +R ++HP+ E +L + + + + Sbjct: 339 MLRESETYGDTLEKVF----TRYGIPHFIDRQRPMKNHPLGELLTALFDIVRHNYSRDSM 394 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 LL ++ E + L +V E GI + L Sbjct: 395 FLLLKTDLMPLTR----EAVDELENYVLEFGIDHYKWERESWPYLRGFYEGQDEESHLDA 450 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 ++ Q + P+ + + A QL L L EW+ Sbjct: 451 PRRARVNKARQTIMDVLSPWFDFAAYS--DGHTGAEWGAQLYGLLETLQVPERLYEWVKD 508 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 + D E++A+ + + I E + + L + L + L Sbjct: 509 AETV------GDQESKASHEQMYNAVLSFIDEISMVMKDEILTLDEMMLLLEEGLSDVNY 562 Query: 651 SQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR------ 703 S + V I T+ S + V ++G+N GV+P+ + G ++ + Sbjct: 563 SMIPPSLDHVVITTIERGYSQWWPKVFVMGLNQGVFPQSMGDEGLIKDKERQELANAGIT 622 Query: 704 ---GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY------ 754 G + ++ +L A+ A L +SY G S +D + PS++V+ L Sbjct: 623 LAEGALPKAFNENFLLYLAMTRASDSLTLSYAG-SGEDGTGLEPSLVVKRLESLGYVDQT 681 Query: 755 ----IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 + + D +S + + L + +P + + + Sbjct: 682 VEIPLSIAPDTEADYVWRPLQSLSLLSERWGALFSGYEVNPLWWGLYNWARESETYRSRL 741 Query: 811 SQAGKAHSEFVQPLPFTLP-----------ETVPLETLQRFWAHPVRAFFQMRLQVNFRT 859 ++ + + T + + L+R+ P + + Q L++ R Sbjct: 742 AEVSRGIRDNNDVPVITQDLVNGLFLSKGYMSGSVTRLERYQQCPFKFYAQYGLKLEPRP 801 Query: 860 EDSE-IPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFR------------RFRAAGD 906 S P+ F+ L R + LL + D + + + G+ Sbjct: 802 VRSFGAPEIGTFLHANLER--LGNYLLENNKQWRDLDEEEQANLCRTVADEILQENQLGE 859 Query: 907 LPYGAFGEIFWETQCQEM----QQLADRVIACRQPGQSMEIDLACNG------------- 949 A+ + + + + +L + + +E D G Sbjct: 860 ETSDAYQKAIEQRVQRTLHVTVDRLVEWSKRSDFDTKYLEQDFGRQGGWDPIRVPLGEDR 919 Query: 950 -VQITGWLPQVQPDGLL---RWRPSLLSVAQGM------------QLWLEHLVYCASGGN 993 +++ G + ++ QL LV ++ G Sbjct: 920 YLRLIGQIDRIDEYTRGGQTYGMVIDYKSGGAHVTAQDVYYGLKLQLMTYLLVLESAYGK 979 Query: 994 GES---------RLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREG 1030 +++ P++ E A+ L+ + ++ Sbjct: 980 THGGSMSPASVVYSYVKNPKIPADAPISYEDAVS-LANESDAWQNS 1024 >UniRef50_UPI00016C0C66 ATP-dependent DNA helicase PcrA n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0C66 Length = 731 Score = 265 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 86/709 (12%), Positives = 197/709 (27%), Gaps = 118/709 (16%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA-----------WQA--------P 167 L+ + A+L + + V + LA T + E W + Sbjct: 32 LTQRIANLIENHQVQPWEILAITFTNKAAAEMRERMTNDVGEDVLKNMWISTFHSMCVRI 91 Query: 168 LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQAL 227 L + + + A + ++ IS+ ++ Sbjct: 92 LRRFGESIGYTKYFTIYDSAEQKITIKDVMKEMNINEKEFQVGAVFSHISSKKNQFILPR 151 Query: 228 QAL--GKHIEIHLLFTNPCRYYWGDIKD--------------------PAYLAKLLTRQR 265 QAL + + Y + + P L+ + + Sbjct: 152 QALKESEGNFREHIIAKIYDAYQDKLYENNVMDFDDLLVNVCILFNNHPDVLSFYQNKFK 211 Query: 266 RHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELD 324 ++ + E QL + VG+ + +G G D +L Sbjct: 212 YILVDEYQDTNCVQYELIRQLADKHKNLCVVGDDDQSIYGWRGADISNILE--------- 262 Query: 325 AFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHS 381 F + + ++ + +N A + E + + I +V + Sbjct: 263 -FEKDFENTTIIKLEQNYRSTKNILEAANAVVKNNENRKPKVLFTDNETGEQIELYVVKN 321 Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD 441 RE +V+ ++ L E +D ++ V +PY + Sbjct: 322 EYREADVIAAQISKDLSEYR-RDYKDFAILYRTNAQ-----SRVLEEKMIQSSIPYRMLG 375 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 ++ +S L + + ++++P + I + ++Q Sbjct: 376 GVRFYERKEIKDLVSYLKIIVNVQDDVAARRIINIP----KRGIGAASIDKIQQ------ 425 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 A + ++ + L Sbjct: 426 ---------------------------------AANDYQVNFYEVAKNIRQFGILGKTAT 452 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 ++ + + +E L + FL + E E A I + + Sbjct: 453 EKVSVFANLIEELKELAQEENILALLQAIIVKTDYNNFLKETEPEDAADRILNVREFVSK 512 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 Q + L+ +E+ D + Q + V + TL + + F VV + G+ Sbjct: 513 AAAYVQSNEEANLNNFLEEITLVADVDNYDQ--NSNAVVLMTLHSSKGLEFPVVFMPGLE 570 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN-- 739 +G++P ++ D+++ +++R L + A++KLYI + Sbjct: 571 EGLFPSHMSASD----------EDKTKLEEERRLCYVGITRAREKLYILQAEERMTYGQI 620 Query: 740 SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP 788 PS + EL + + + + + + K P Sbjct: 621 KAVEPSRFIAELPAEVIRINKVFASKKYAKKNNYEPTKKSDIEFKIWNP 669 >UniRef50_C4Z8S4 ATP-dependent DNA helicase PcrA n=17 Tax=Firmicutes RepID=C4Z8S4_EUBR3 Length = 763 Score = 264 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 85/705 (12%), Positives = 193/705 (27%), Gaps = 119/705 (16%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAW------------------QAPL 168 L+ + A L D+ V + +A T + E L Sbjct: 35 LTYRTAYLIDECGVNPYNIMAITFTNKAAGEMRERIDDMVGYGSESIWVSTFHSTCVRIL 94 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQ 228 + + + + + + + ++F+ IS+ + ++ Sbjct: 95 RRYIDRLGYDTNFTIYDADDQKALMKDICKRLEIDTKMYKEKMFLNVISSAKDEMIDPIE 154 Query: 229 ALGKH--IEIHLLFTNPCRYYWGDI--------------------KDPAYLAKLLTRQRR 266 + + + Y + D L R R Sbjct: 155 FENRFTGDFVKRKQALVYKEYQNALKQNNALDFDDLLVKTVELFKLDKEVLDYYQERFRY 214 Query: 267 HSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDA 325 ++ + E L VG+ + + G + +L+ Sbjct: 215 IMVDEYQDTNTVQFELIRLLAMKYKNLCVVGDDDQSIYKFRGANIYNILN---------- 264 Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSP 382 F D + ++ + +N A ++ + + ITF S Sbjct: 265 FEKHFEDAKVIKLEQNYRSTQNILDAANSVISNNVGRKDKRLWTDNGAGDRITFEQLESG 324 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 E + + + ++ + +D V+ +F +PY I Sbjct: 325 FEEADYVARSIARLVRKGE-ARYKDCAVLYRTNAQ-----SRLFEEKFIAANIPYKIVGG 378 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + ++ ++ L D+ V +++VP + I + + Sbjct: 379 VNFYARKEIKDILAYLKTIDNGHDDLAVKRIINVP----KRGIGATSINKVTD------- 427 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 YA+E + ++ DE G+ A G Sbjct: 428 --------------------------------YAIEKGIDFYTALRYVDEVPGM-ARSAG 454 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 + +M + R + + + + D AE + +I + Sbjct: 455 KIKPFVMFIQSLRARA-EMDSVSQLIQAIIDETGYVDELKAEGTDEAEQRIENIDELINK 513 Query: 623 GLGAQ-YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 + + + LS +E+A D + + V + TL + + F V L GM Sbjct: 514 AVDYEQGEENPTLSGFLEEVALVADID--GLDENSDYVVLMTLHSAKGLEFPNVYLAGME 571 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 DG++P ++ D S +++R L + A++ L I+ + Sbjct: 572 DGLFPSYMSITSDD---------ATSEIEEERRLAYVGITRAKEHLTITSARMRMVRGET 622 Query: 742 R--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 + S V+E+ + + E ++ Sbjct: 623 QFNKVSRFVKEIPRELMSGEVYEPKRRDDDIERNSQSTYRKAKEA 667 >UniRef50_C4G2S8 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2S8_ABIDE Length = 768 Score = 262 bits (669), Expect = 5e-68, Method: Composition-based stats. Identities = 93/722 (12%), Positives = 212/722 (29%), Gaps = 132/722 (18%) Query: 96 MTLLPQLLEREDFTLLRH-----YLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWE 150 M +L L + ++ L + L+ + A L +Y V + LA Sbjct: 1 MNILDNLNPEQKKAVVHENGPLLILAGAGSGKTRV-LTRRIAYLIKEYGVSPWNILALTF 59 Query: 151 TGHLVEGLGEAQAWQAP-----LW------------KALVEYTHQLGQPRWHRANLYQRF 193 T + E +W + ++ + + + Sbjct: 60 TNKAAREMRERVDELIEEGAENIWVSTFHSACVKMLRRFIDKIGYDRSFNIYDTDDTKAV 119 Query: 194 IET-LESATTCPPGLPSRVFICGISA-----LPPVYLQALQALGKHIEIHLLFTNPCRYY 247 ++ L++ P + + IS + G ++ + Sbjct: 120 VKQVLKALNIDNKEFPEKTCLNVISNAKNDFIDAEEFAVNSKFGVDNNVYARVYSEYEKR 179 Query: 248 --------WGDIK---------DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-- 288 + DI D L R R ++ + + L N Sbjct: 180 MKNNNALDFDDILVKTVELFQTDKDTLEYYQRRFRYILVDEYQDTNIVQFKLLKLLANYV 239 Query: 289 ------SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDI 342 + VG+ + + G D +L+ F + P+ L+ ++ + Sbjct: 240 NEDGEIENNLCVVGDDDQSIYKFRGADIRNILN----------FEKIYPNALVIKLEENY 289 Query: 343 LELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 N A + + +SI++ + +RE + + +L + E Sbjct: 290 RSTGNILEAANGVISNNKERKDKRLWTSKEGGASISYKTYDTGEREANGVANTVLRTVNE 349 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 DI V+ +PY + S ++ ++ L Sbjct: 350 GK-AKYSDIAVLYRTNAQ-----SRAIEEKFIYSNIPYKLYGGTNFYSRKEIKDILAYLK 403 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 ++ V +L+VP + I + Sbjct: 404 TINNPKDDTQVRRILNVP----KRGIGSATEDKI-------------------------- 433 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI---AELVGHLASLLMQLNIWRR 576 YA+E +++ + GL A++ +A + ++ ++ Sbjct: 434 -------------ADYALEKEISFFEACMRVQSIPGLSRAVAKVEKFVAFIGAKIREFKD 480 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 + + +E + + E + + IE+ + LG Q + L Sbjct: 481 TVCMKAEVEALIEEIGYIEELKLEGTDEAQGRIENIEELINKVAIFELGNQDAGDIKLGN 540 Query: 637 LRDELAQRLDQE-RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 +++ D + + S+ A V + TL + + FK+V ++GM +G++P ++ D Sbjct: 541 FLADVSLATDADNKDSENKDADKVTLMTLHSAKGLEFKIVFIVGMEEGLFPSRMCLFAMD 600 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELID 753 + +R + A +KLY+S + PS + E+ + Sbjct: 601 ESELEEERRL----------CYVGITRAMEKLYLSNAASRMLRGDVQWNAPSRFIGEIPE 650 Query: 754 YI 755 ++ Sbjct: 651 HL 652 >UniRef50_C7H111 ATP-dependent DNA helicase PcrA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H111_9FIRM Length = 753 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 75/602 (12%), Positives = 171/602 (28%), Gaps = 85/602 (14%) Query: 182 PRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 P+ + ++ FI +S P + + + +A Q + K Sbjct: 144 PKEYPVKMFTSFISKCKSQKIVPDEVFDYFDDSFKTQISQQVYEAYQNVLKANNAMDFDD 203 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLL 300 K P L R + ++ + E +L + VG+ Sbjct: 204 LLLNTVILFSKYPDILKIYAERFKYIMVDEYQDTSSLQFELINKLAHVHKNICVVGDDDQ 263 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF-- 358 + G +LS F V + ++ + +N A + Sbjct: 264 CIYEWRGATIENILS----------FEKVYKGTKIIKLERNYRSTKNILDAAHAVISNNS 313 Query: 359 -SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + I+ V + E E + D++ + + T +DI ++ + Sbjct: 314 KRKEKKLWTGSVEGEKISIEVYENAHAEAEFIVDKIRQAVA-EEGKTYKDIAILYRNNSQ 372 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 +F A +PY I + ++ L + ++ F L ++ P Sbjct: 373 -----SRLFEEALKRWDVPYRILSGIRFYERSEIVDMLAYLRVTENPFDDIAFLRCINEP 427 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + ++ L + + E GI Sbjct: 428 A----RGLGKKALEKVASFARERGI----------------------------------- 448 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP-LEEWLPVCRDMLN 596 + +L + + L A + + + L E + L + Sbjct: 449 ----SLFAGLLMDECLAELSAAARRGAEEFIKMIKHAQDMLLDENTRISNVLKYIIETSG 504 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY-----GDAVPLSLLRDELAQRLDQERIS 651 + ++A + + + LS +E+A D + Sbjct: 505 YERKLKLADTLESDAKLENIYELVASVADREGSSAGDDEKLTLSAFLEEIALISDVDN-- 562 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 A V + TL + + F VV + GM +G++P + ++ Sbjct: 563 HDETADAVVLMTLHSSKGLEFNVVFIPGMEEGIFPSGQGDDN------------PGKIEE 610 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNC 769 +R L A+++L++S + PS + E+ + + +++ + Sbjct: 611 ERRLCYVGFTRAKEELFLSAAKWRRHYYEDMYMQPSRFLDEVPEELVKTNVVEASSRDRY 670 Query: 770 DE 771 + Sbjct: 671 TD 672 >UniRef50_A9KP66 UvrD/REP helicase n=12 Tax=Bacteria RepID=A9KP66_CLOPH Length = 807 Score = 258 bits (658), Expect = 9e-67, Method: Composition-based stats. Identities = 84/752 (11%), Positives = 209/752 (27%), Gaps = 135/752 (17%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA----------WQA--------PL 168 L+ + A L ++ V +A T + + E W + L Sbjct: 36 LTHRIAYLIEERNVNPYQIMALTFTNKAAKEMRERVDKIVGYGAENIWVSTFHSTCVRIL 95 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGIS-----ALPPVY 223 + + + + + E L+ RVF+ IS + P Sbjct: 96 RRFIETLGYDRNFTIYDTDDQKTLIREVLKFLQIDTKQTKERVFLSAISSAKDEGISPEE 155 Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLT--------------------R 263 + L ALG + + + +N + Y +K L R Sbjct: 156 FE-LSALGDYNK--MKISNVYKEYQRRLKTNNALDFDDLIMKTVELFQSNTEALNYYRNR 212 Query: 264 QRRHSFEDRELPLFRDSENAGQLFN--------SDGEQDVGNPLLASWGKLGRDYIYLLS 315 R ++ + + L + VG+ + + G + +L Sbjct: 213 FRYIMVDEYQDTNTIQFKLIRLLAHSLNEYNEVEHNLCVVGDDDQSIYKFRGANIRNILD 272 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDS 372 F PD ++ ++ + +N A + + + + Sbjct: 273 ----------FEKEFPDAVVIKLEQNYRSTKNILNAANEVIHNNLGRKDKSLWTDNEDGE 322 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 ++F + E + D + + + ++ + ++ VF Sbjct: 323 QVSFCQYDTDFAEATQVVDSIKTL-NDQDGISFNNFAILYRTNAQ-----SRVFEEKMIQ 376 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 R +PY I ++ ++ L D+ V +++VP + I L Sbjct: 377 RSVPYKIIGSINFYQRKEIKDLLAYLKTIDNGLDGIAVKRIINVP----KRGIGLTTLDR 432 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 + ++ ++ + + L + E Sbjct: 433 VEEFSVKNNMSFY----------------------------------------DALRHAE 452 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQER-PLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + + + S + + + L+ + L++ + + + + + Sbjct: 453 NIPGLGRSTSKITSFVSFIETIKSKLSSDTFTLKDLMEEILEGTGYLKELEEADDESAED 512 Query: 612 IEQQWQAIIAEGL--GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 +I + + + + LS +E+A D + S + V + TL + Sbjct: 513 RIGNINELINKIVTYEVEATEPPTLSGFLEEVALVADID--SLEEDSNHVVLMTLHSAKG 570 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V L GM DG++P ++ + + + + A +++++ Sbjct: 571 LEFPYVYLCGMEDGIFPSYMSINAENPELEIEEERRL---------CYVGITRAMKQIHL 621 Query: 730 SYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 S + + + PS + E+ Y+ L D + + + Sbjct: 622 SAARQRMMRGETQFNRPSRFINEIPRYLLTIQSAQNKGYLAKDSYGESPIRNASPNFSTQ 681 Query: 788 PFDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 + + + Sbjct: 682 --SRGMFDSDNPFDKSSSYNDTMFDKATPSMR 711 >UniRef50_A1HTK8 UvrD-like DNA helicase, C terminal n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTK8_9FIRM Length = 1160 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 135/1085 (12%), Positives = 273/1085 (25%), Gaps = 193/1085 (17%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID--FPLP 65 + + + + P +++V Q + L+ G++ + Sbjct: 13 GKTSRCLDAIRERLRQAPDGPPL---LLIVPEQATFQ-AERELAATPGLSGFVRAHVMGF 68 Query: 66 ASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF 125 + + P L + +LR LT+ D+ KL Sbjct: 69 RRLAYRVLAETGGGAA------------------PHLTDLGKRLVLRRLLTERRDELKLL 110 Query: 126 Q-------LSSKAADLFDQYLVYR--PDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYT 176 + A L ++ Y PD +A L A L+KA ++ Sbjct: 111 GQAAAQRTFADTLASLIWEFKTYGIAPDKVAAASERLGATPLAAKLHDLALLYKAFEDFL 170 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 L + V++ G P L+A Sbjct: 171 QGRYTDPEDCLRLLA------AKIPAATLTRGAEVWVDGFEWFTPQEYGVLEA------- 217 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 + + + E + Sbjct: 218 -------------------------------LLSAAKDVTVTLCLDEPDAPHHADETALF 246 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 + L + + +V + Q+ IL R Sbjct: 247 H--------RSWKTRQSLRARAARLGVSCREEV--LTAVRRFQAPILAYVERYANDAR-- 294 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 +T + + EVE + ++ + D RD+ V++ D+D Sbjct: 295 -------PPAWRGDKQGLTIAEAANRRTEVEGIARDMIRL-CRDEGYRWRDMAVLLRDMD 346 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y ++ V +P+ +R HP+ E S L + R+ E V L Sbjct: 347 GYIDLVETVLADYD----IPFFSDRQRPAVHHPLAELIRSALEVVTERWAYEPVFRCLKT 402 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 + + + L +V E GIR + + R Sbjct: 403 DLFPLSR----DEIDLLENYVLEFGIRGSRWTKDEPWTFVRRLSLDEDAEPDER--QQAY 456 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 ++ + + L L LE+W Sbjct: 457 LDRINAIRCRAAKPLIRFEQALTQAETVREMTAALYGLLADLDVPATLEKWAAAAST--- 513 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 D E E I ++ + + + L+ + + L+ + Sbjct: 514 ---ARDPEQEREHRQIWHSIVDLLDQIVDTCGEQPMSLTDYAAVVNEGLEGLTFNIIPPG 570 Query: 657 -GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG---------DR 706 V + L R + KVV L G+NDGV P + G ++ + Sbjct: 571 LDHVTVTPLTRAR-LAAKVVYLPGVNDGVLPERGREEGLLSDRERAELASLGLELGPTRE 629 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY----------IG 756 + ++++ AL A +L++S+ + PS++++ L + + Sbjct: 630 ADVFAEQFVVYTALTRASDRLWVSFPLADA-EGKALAPSLIIRRLKELSGIEALKPLPVE 688 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQA--G 814 + ++ S A + A L P + +A G Sbjct: 689 PPPGAEDEYIVHPRRSLAALAAGLRPALAGQPVGTLWRDLYNWAVARPDLAADLRRAVAG 748 Query: 815 KAHSEFVQPLPFTLPETVP---------LETLQRFWAHPVRAFFQMRLQVNFRTEDSE-I 864 H Q LP L + + + + F A P + F + L + R Sbjct: 749 LFHRNQEQALPPELAQRLYRRQGKLRGSVTRFEGFQACPFQHFARYGLALKERAVAQLKA 808 Query: 865 PDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGD------------------ 906 PD F L ++ + + + D+ R R + Sbjct: 809 PDFGQFFHAALRQFGLR---IEKELTADNQRRWQRWGDVQDEEIGPLCEAIVQELAPKLQ 865 Query: 907 -------LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG---------- 949 Y + T + + +L R ++E +G Sbjct: 866 NEILLSSAQYRSITRRLQRTLQRTVTRLVRLDRRSRFKPVALEQAFGRDGAALPALVLTL 925 Query: 950 -----VQITGWLPQVQPDGLLRWR---PSLLSVAQGMQLWLEHLVYCASGGNGESRLFLR 1001 +++ G + ++ R + + L+ Sbjct: 926 RDGTVLELVGQIDRLDMAEHQGRRLLAVIDYKAGGAWLRLPDVYYGLRLQLLTYLLVALQ 985 Query: 1002 KDGEW 1006 Sbjct: 986 HAAVL 990 >UniRef50_C0CPC7 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CPC7_9FIRM Length = 1111 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 129/1045 (12%), Positives = 279/1045 (26%), Gaps = 142/1045 (13%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF--GIAAN 59 L++ N + + RE ++ P +ILV Q + L Q G N Sbjct: 3 LQMILGNSGAGKSHFIYQKIIRESMEHPDRQYVILVPEQFTMQTQK-RLVQMHPGGGILN 61 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 ID + +F V + +S+ +L ++++ + L YL Sbjct: 62 IDVLSFERLAYRVFEEVGGDDAPLLEETGKSL------VLQKIVQDKKKEL--PYLGVQM 113 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 K Q QY V + L + QA L L Sbjct: 114 KKPGCIQEMKSLVSELMQYDV----------GEETLGELVKRSEDQALLHCKL------- 156 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 +Y+ F E L+ +P + + ++ K + Sbjct: 157 ----QDIHRIYEGFREYLKERFLTGEEVPDVLC------------RVIEKSKKFQGGIFV 200 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 + +L+ + + Q L Sbjct: 201 LDGYTG---FTPIQNKLIRELMLLGEQVYVTVTMDVKAQRLSGKYQ-------------L 244 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 + GK+ + L + + E + +V ++ +E+ Sbjct: 245 FSMSGKMRDQLLKLAGEARVAVEKEQWVLPGENSRFGKN-----------PELNFLEQHL 293 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 ++ + ++ +P +EV+ +L ++ + +I V+ D+ SY Sbjct: 294 FRYHRVVYEREPQALALTRWENPLQEVKGTAAEILRLV-REKGYRYGEIAVITGDLPSYG 352 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + + VF A +PY I ++ + +P +E + + + RF E L + Sbjct: 353 TYARQVFSQA----QIPYFIDEKHSILMNPFVEFLRAAVEMIVDRFSYESCFRYLRCGMS 408 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + + E + L +V GIR P + L Y + Sbjct: 409 SL----SLEEIDELDNYVTALGIRGYSKWKETWVRLYPGLDEERILE-----LNRYREQF 459 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 + V + + E L + + ++ ++E Sbjct: 460 LKEISWLVQGFRGGVKTVRERSCALYQFISD-----NEMQEKLKIQEL--------EFAG 506 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GP 658 D E I ++ + + + V + L L + +++ + Sbjct: 507 RKDKAMEKEYAQIYGIVMRLLDKMVEILGDEKVSAREYQQLLEAGLTEAKVALIPPSSDQ 566 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP---------KRGDRSRR 709 V + + R KV+ LG+N+G P+ + G + R Sbjct: 567 VLVGDMERTRLKEIKVLFFLGVNEGNIPKDSSRGGLLTQMDREFFQEEKIELAPDARELL 626 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG--------QSHYL 761 R+ L Q LY+SY + + + LV + S Sbjct: 627 GQSRFYLYLNLTKPQDFLYLSYSQANAK-GEGLSAAYLVGTIQKLFPALRLRCGQGSSLE 685 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ-----AGKA 816 + + + +SY + Sbjct: 686 GLQRPSGSLDYFLEGLQEYEYGQETKVWRELYRWYQKDESYRPQVNRLVEAFFSENPQDR 745 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI-PDTEPFILEGL 875 S+ V + L+++ A F + LQV R + D + + L Sbjct: 746 ISKAVAKALYGEVSPYGATRLEQYAACAFAHFLRYGLQVTERVQYEFSGMDLGNVMHKAL 805 Query: 876 S------------RYQINQQLLNALVEQDDAERLFRR--FRAAGDLPYGAFGEIFWETQC 921 +++++ LV + E Sbjct: 806 EIFARKVRDQRLSWGELSREDRERLVSESLQEVTEDYGNTILHSCARNEYLIRRTQRVLN 865 Query: 922 QEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW 981 + L +++ + E+ + + + + + + Sbjct: 866 RTAWALQEQLRRGDFQPEGFEVAFEGGRI---DRVDICEDENKVYVKVMDYKTGNVSFDL 922 Query: 982 --LEHLVYCASGGNGESRLFLRKDG 1004 L H + ++ L + + Sbjct: 923 VALYHGLQLQLMVYLDAALLVEQKK 947 >UniRef50_A7VJ44 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VJ44_9CLOT Length = 1128 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 107/1056 (10%), Positives = 251/1056 (23%), Gaps = 176/1056 (16%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF--GIAANIDFPLPASFIWD 71 + + + + +P ++V + Q L G NID + Sbjct: 15 SRQIYNEIIQASIKEPERNFYLIVPEQYTME-AQRELVTMHPAGGMMNIDAIGMNRLAYR 73 Query: 72 MFVRVL-PEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD--DSDKRKLFQLS 128 +F + F K + K++ +++ + Y D+ K Sbjct: 74 VFDELGISTGQVLEDFGKSMLIKKIL-----CEQQDTLQVYGSYYDKLGFVDEMK----- 123 Query: 129 SKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRAN 188 S +++F QY + + E + +++ + + Sbjct: 124 SMMSEIF-QYNIKQDTIDEIMEQISEDSVVAGKMQDIRHIYEEFEAFAGERYIVAEQLVE 182 Query: 189 LYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYW 248 L R S ++ G + PV L+ ++ L + Sbjct: 183 LLTR------HVGQSKLVCGSSLYFDGFTGFTPVQLELVEKLMTCADDLTFSFT------ 230 Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR 308 L + + Sbjct: 231 --------LDDRDQKYEHIKDYELFYLTKT------------------------------ 252 Query: 309 DYIYLLSDLESSQELDAFVDVT-PDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 I L++ ++ ++ V P + + + + +E + Sbjct: 253 -TIKKLTEAAAAAGVEIESPVVLPGTINYRLGEN--------RELFFLERNLFRSPYQKW 303 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 I Q E+ + + ++ + +DI ++ D++ ++ Sbjct: 304 KQPLERIHLTATGDAQDEIVFVASTIRRLV-REKGYRYKDIAIVAGDLEQA----SHIYE 358 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + +P I +++P E S+L++ F + V L + F Sbjct: 359 RVMDEYEIPVFIDANACLKANPCAETIRSVLAVLADDFSYDSVFRFLKAGMTDLSF---- 414 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 E + L + + G+R + T + Sbjct: 415 EDIELLENYALKRGVRGYSRWNRAVSENYEKTSPVNIEEIRQ---------------AFM 459 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + + + A+ + L + + LE + Sbjct: 460 KMFGDIRKVFADKKAVTKDYVEALYDFLLQIHMYEKLEARKNELYE------ENRINEGD 513 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMP 666 A I ++ + + + + + + L + V I + Sbjct: 514 AYGQIFEKTVRLFDKIAELLGDTKMSVKEFYEIVDTGLSDIEVGVVPPTVDRVLIGDITR 573 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK---------PKRGDRSRRDDDRYLFL 717 R KV+ +NDG+ P+ + D+ +++ Sbjct: 574 SRLNHIKVLFFTSVNDGIVPKAPKKGRILSDRDRDILSDCGLELAPSDKQNSYIEQFYIY 633 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 L LYISY S PS L+ + D A ++ R Sbjct: 634 TILTKPSDYLYISYHKLSASL-ESMRPSYLLGRISSIFPSLQAEEYDAASCMPDTVNRSL 692 Query: 778 AH-LTCLHTRMPFDPQNYQPGERQSYARE---WLPAASQAGKAHSEFVQPLPFTLPETVP 833 L + + + +A E + A + + + Sbjct: 693 RRILRAEDSEDAESRILTRILTEKGFAGELTAIYKGRTYRNVAEQLPPETIALLYGRYLH 752 Query: 834 --LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ 891 + L+ + F + L++ R ++ + I ++ L +Q Sbjct: 753 ASVSKLELYARCGFAYFLKYGLRLKEREMYQ---------VDVRNVGVILHSVMEGLFKQ 803 Query: 892 DD-------------------------AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 A + ++ Sbjct: 804 VRDTRNNDWENFPEDERMLMVTELVNRAAEESAGDFFEDNARNAYMLQMIERMAQTSAGM 863 Query: 927 LADRVIACRQPGQSMEIDLACNG---------------VQITGWLPQVQ---PDGLLRWR 968 L + +E + I G + +V DG + + Sbjct: 864 LQKHIRLGSMKPGMLEKTFDSAKDEVGSYLFELPNQIQMSINGKIDRVDVEEEDGTVYIK 923 Query: 969 PSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDG 1004 + E L S + + Sbjct: 924 VIDYKSSARKLSLEEILNGEQLQLVTYSAIAYEIEK 959 >UniRef50_Q6MI36 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MI36_BDEBA Length = 762 Score = 257 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 70/618 (11%), Positives = 166/618 (26%), Gaps = 80/618 (12%) Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 +A + K + Y P L + R ++ + Sbjct: 176 TVEVYKAYEREMKKANSLDFDDLLLKTYDLFRMYPDVLQMYQKKFRYIMVDEYQDTNHIQ 235 Query: 280 SENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNI 338 L ++ VG+ + + G D +L F D + + Sbjct: 236 YLLVQMLASAHRNLCVVGDEDQSIYSWRGADIKNILD----------FEKDFRDAKVIKL 285 Query: 339 QSDILELENRAV---AGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA 395 + + N A + + + I + E + + + Sbjct: 286 EENYRSSANIVNGATAVIKNNSQRKDKTLFTSNDPGDLIHVREEKNEYEEGRFVAKTIQS 345 Query: 396 MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 M+ E + D + V +PY + ++ I Sbjct: 346 MMNEGEG-SYNDYAIFYRTNAQ-----SRVLEEQLRTMGIPYRLVGGVRFYERMEIKDMI 399 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 S L L + + +++VP I + + + Sbjct: 400 SYLKLSINPADDIALKRIINVPA----RGIGKTTIEKI---------------------- 433 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 YA +++ E A G + + + + Sbjct: 434 -----------------EEYAAHKNLSMFEAAEKACEERLFNAGTTGKIRRFIDLMKDLQ 476 Query: 576 RGLAQERPLEEWLPVCR--DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 + + LE + V + L A ++ A ++ IA+ + + ++ Sbjct: 477 QNAQHLKLLEFFAVVLDRTEYLAALKKDESPESQARIENLEELDNAIAQFVQERGEEST- 535 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L +E+A D + + Q V + TL + + + V ++G+ + ++P + Sbjct: 536 LISFLEEMALVNDVDSLDQE--QNSVTMMTLHISKGLEYPYVFVVGLEENLFPSARSAES 593 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQEL 751 + +++R L + A+QKL+++Y E+ PS ++E+ Sbjct: 594 DN----------EQDVEEERRLAYVGMTRARQKLWLTYAKMRRVWGQEQFNPPSRFIKEI 643 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 + + + + + + P Sbjct: 644 PQNLIDFKTSAEAPRFMARYGSSSYDSDFGGTPKWGATSSDRNRARTQSYDDAQDFPDYE 703 Query: 812 QAGKAHSEFVQPLPFTLP 829 G + F + + P Sbjct: 704 NDGAGSAPFSKGMRVRHP 721 >UniRef50_Q04T79 ATP-dependent DNA helicase n=6 Tax=Leptospira RepID=Q04T79_LEPBJ Length = 730 Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 70/546 (12%), Positives = 160/546 (29%), Gaps = 82/546 (15%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDY 310 K P +AK + ++ + + L VG+ + + G D Sbjct: 201 KSPDAIAKYRHKWEYVMVDEYQDTNKVQYQLVLLLAGEKRNLCVVGDDDQSIYSWRGADI 260 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPL 367 +L+ F P++ + ++ + N +A + + Sbjct: 261 GNILN----------FEKDFPESTVIKLEENYRSSSNIILAASKVISNNTQRKQKEIFTN 310 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 +P S + + + E + R+ + ++I + F Sbjct: 311 NPKGSPVVLNEFENESEEAHGVITRIRSAYS--YGTEYKNIAIFYRTNSQ-----SRYFE 363 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A + +PY I ++ FI+ LS+ + S +L +++ P Sbjct: 364 EALRNLGIPYKIFGGFRFFDRAEIKDFIAYLSVVSNPLDSVSLLRIVNYPPRGIGDSGIG 423 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + + +++E +++ Sbjct: 424 K-------------------------------------------IREFSLEKGISLLEAL 440 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 D A+ G L + + + E + E Sbjct: 441 GQEDIPLKKAAKSKGK--ELYSLFSDLIEKVEKSSSPSEIALELLNRSGLVSHLRDEGTE 498 Query: 608 AMTLIEQQWQAIIAEGLGAQYG-DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + Q ++ + D+ L ++++ +E + L VN+ T+ Sbjct: 499 ESIARLENLQELVNSIEEYEKNSDSPSLEEYLNQISLITSEEE--SKELTDYVNLMTVHN 556 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + FK+V L G+ +G +P ++ +++R LF AL A+++ Sbjct: 557 AKGLEFKIVFLSGLEEGTFPHSMSLEDSHFGD-----------EEERRLFYVALTRAREQ 605 Query: 727 LYISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 L++SY S + +R PS + E+ + A + + K Sbjct: 606 LFLSYCRTSRKFGKVEDRIPSRFLSEIPEECFVERVSREHTARSPQGAPLASKTRRIEEK 665 Query: 785 TRMPFD 790 F Sbjct: 666 FNSGFS 671 >UniRef50_C9RQA7 Exodeoxyribonuclease V RecC subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQA7_FIBSS Length = 1256 Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats. Identities = 189/1082 (17%), Positives = 354/1082 (32%), Gaps = 152/1082 (14%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML + + L+ L M V + +PFE ++ + QW ++ QK Sbjct: 14 MLYLKFALNLENLADKMIDAV-SDAWTNPFEAPAVIFPDPKLEQWFRLKWVQKKKSLIGF 72 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLL-PQLLEREDFT----LLRHYL 115 + F + ++ + + + + + ++ L + ++ ++ YL Sbjct: 73 KSMMIDRF---LMEILIGDDTHKQKLHAEMLRNVILAHLVKETDGVPNYMRMDDEVKRYL 129 Query: 116 TDDS--DKRKLFQLSSKAADLFDQYLVYRPD-------------WLAQWETGHLVE---- 156 D D+ LF +SK A LF +Y RP L +W+ HL + Sbjct: 130 VIDRTLDETHLFDFASKMASLFLEYETSRPKDFIRRADGSSAPGILEKWKQDHLDDFFGI 189 Query: 157 ---GLGEAQAWQAPLWKALVEYTHQLG------------------QPRWHRANLYQRFIE 195 + + +AWQ L+ A+ LY+ + Sbjct: 190 ANHDIAKREAWQRELYSAIFHEHQGKPSLLTEVFENEAKRKGIERTEYLTIPYLYKACQD 249 Query: 196 TLESATTCPPGLPSR-VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDP 254 + T + + +FI G+ + Y LQ + +++ NPC +W D Sbjct: 250 DKGNVTFHTEHIGNTPLFIFGLGGMGQFYRVILQKYAETHDVYAYIQNPCMEFWEDTSTV 309 Query: 255 AYLAKLLTRQRR----------HSFEDRELPLFRDSENAGQLFNSD-------GEQDVGN 297 + R + S +D + D NAG+ + D E + N Sbjct: 310 HDQNANIHRNWKSRDGQWKDNGTSLDDVREKMSVDYSNAGESTDVDDISEYSNEEAEAEN 369 Query: 298 PLLASWGKLGRDYIYLLSD---LESSQELDAFVDV-------TPDNLLHNIQSDILELEN 347 LL +WG+ GRD I L + + D D LLH +Q I N Sbjct: 370 TLLCNWGRSGRDNIKLWCQAVNYDFDFSMSGREDDNRTAQDLPQDTLLHKVQYAIANRIN 429 Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 D S+ + RE+E LH + +++ D Sbjct: 430 TLPN----------FTASDCKARDFSLDITAAPTKIREIEALHTNISKLMQ--KGARVND 477 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADR------------YLPYAISDRRARQSHPVLEAFI 455 I+V+ +D Y I+ +F P + ++P+AI D AR S Sbjct: 478 ILVVSPALDDYRTAIKTIFDQTPEKKKYAGENEKEGFLHIPFAIVDSPARSSLTENVLDN 537 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 L LL PV+ IT+E + W+ + I Sbjct: 538 LFTILEQGTITRPTFFELLRNPVVQLTRHITDEDVSNWESWIEATNIYR----------- 586 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQS-VLPYDESSGLIAELVGHLASLLMQLNIW 574 + W G+ R+LL ++ LPY + + + + L W Sbjct: 587 DREQKKEDWMSGVRRLLLAKMTKNPVEFSDGEFLPYADMATSDNSSLCKFVECIESLKKW 646 Query: 575 RRGLAQE-------------RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE--QQWQAI 619 + L++ + L+ PD + + + Q + + Sbjct: 647 MEFAGCKQNVKHEIVCENRIENLDKLCDFINEWLSMASSPDGFASERIIVNDVTQSIEGL 706 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-AGPVNICTLMPMRSIPFKVVCLL 678 + ++ +++ L S L + +P R IP K + + Sbjct: 707 RNQMDA--GLQSISWKVVKQTLLNAAQSSAYSCGSLFVNGITFMNFIPNRIIPVKHLFFI 764 Query: 679 GMNDGVYPRQLAPLGFDLMSQ-KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ 737 G + +P DL +P GD S RY FL L+S + +ISY+ + I+ Sbjct: 765 GGDSMNFPGAKQQNTLDLRKSCRPWPGDDSPIAKRRYAFLCQLMSTSESFHISYVNQDIR 824 Query: 738 DNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG 797 ++E +P+ +V ++ ++ + D + + L F+ Q Sbjct: 825 KDAELYPTSVVNDIRKFLVNAVNSKTDVSNEKVSQSDAWPENKISLDETRSFEDLFTQKS 884 Query: 798 ERQSYA-----REWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMR 852 R A ++ A+ A + LP+ V + L F P + Sbjct: 885 LRNKRAFLNMMQDGYAHANPETDAIESASNNITAKLPDRVSIYMLSSFLKDPFQFRISQM 944 Query: 853 LQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV--EQDDAERLFRRFRAAGDLPYG 910 L + +ED E EP L+ L + + + L A + + D+ E+ + + G P G Sbjct: 945 L-ADSDSEDPEKEMFEPVQLDALKKSTLLKMTLAAELSNKSDELEKFKKESKLKGGTPDG 1003 Query: 911 AFGEIFWETQCQ--------EMQQLADRVIA---CRQPGQSMEIDL-ACNGVQITGWLPQ 958 FG+ + + L ++ + + ++ + ++G L Sbjct: 1004 IFGDKLSSEIEENKKIIMDNMGEALVKKIKESWCYQAKIEDIQFERSDSEKWTLSGSLDW 1063 Query: 959 VQ 960 Sbjct: 1064 SD 1065 >UniRef50_C8NCI0 Exoribodeoxynuclease V, gamma subunit n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCI0_9GAMM Length = 1251 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 182/895 (20%), Positives = 321/895 (35%), Gaps = 85/895 (9%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M R+ S L A + DP ++V + + L TL+ + GIAA I Sbjct: 1 MYRLIESTDYPALLARYLQDYDHYSRADPLGDTPLIVPTLPVGNILIQTLASQRGIAAGI 60 Query: 61 DFPLPASFIWDMFVRVLPEIP--KESAFNKQSMSWKLMTLLPQLLE-------REDFTLL 111 L ++ W + R+ + ++ ++ W+L + L Q LL Sbjct: 61 TLRLWHNYEWMLVERITGKSRSSSQAPLGNTAIRWELFSYLYQHGNTILADPGHPQHALL 120 Query: 112 RHYLTD-----DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAW-- 164 R D R+L+ S + A+L+ YL RP+WL+ W L Sbjct: 121 RGLYPDTDKITHDHTRRLWVYSGQLANLYSTYLNQRPEWLSAW-QNADPPPLDALLKNDS 179 Query: 165 -------QAPLWKALVEYTHQLGQP-----RWHRANLYQRFIETLESATTCPPGLPSRVF 212 A ++AL + +L R + F +TL++ + LP + Sbjct: 180 LQQLPPQIADHYRALYQQQSRLWHDRFAAIHAERERRRETFWQTLKTRESARRLLPPYIP 239 Query: 213 ICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDR 272 + + L ++ LG + ++ Y DI D +L +L R Sbjct: 240 VFAPTHLHAAEHDFMRRLGNYTDLTHYHLAASDGYIDDIVDSRWLRELKAR--------- 290 Query: 273 ELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPD 332 S ++ G+ LL+ +GK RD LL + L A P Sbjct: 291 -----------AAGKPSGEHREHGHELLSRYGKQQRDLSRLLHADSDPEPLPA-TPAPPH 338 Query: 333 NLLHNIQSDILELENRAVAGVNIE-----------------EFSRSDNKRPLDPLDSSIT 375 NLL +Q++I EL+ VA E + N P D S+ Sbjct: 339 NLLTALQAEIRELKEDHVAACLAATTLPPSLQSGGRTGRGCENRAATNPDHQTPQDHSLR 398 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY- 434 H CHS QR+ E L ++A L DP+ DI + + D + ++A F Sbjct: 399 IHGCHSLQRQCETLRSDIVAWLNADPSRRLSDIYIHLPDPAAAQTTLRATFPPGGDYDGN 458 Query: 435 -LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 LP + + + + +L + RF + VL L I E ++ + Sbjct: 459 RLPARLIGVTENPAENLWRSLAGRYTLINGRFDAPTVLDWLHNEDTCHSLGINSEHMQRI 518 Query: 494 RQWVNESGIRWGIDDDNVRE--LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 + +G R G D +++ ++T+ + L R++ G A ++V P Sbjct: 519 TAALVAAGYRRGYDGAHLQPTLHTEDHDHRYTYTYALNRLIAGVLTPDADHYREAV-PQH 577 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + + LA+L ++ R A+ P + WL R L+ + A Sbjct: 578 GLTLADLPALEALATLAENMHTLRALQAENTPAQNWLQHLRATLHDAYTHAH-NSPAWQT 636 Query: 612 IEQQWQAIIAEGLGAQY------GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLM 665 ++Q + + Q +PL + + + +L ++ S +G + I +L Sbjct: 637 LDQALDDLQNQLAAHQALAPQNEQHYLPLEFILENIENQLADQQNS-SEPSGVITIGSLK 695 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS-QKPKRGDRSRRDDDRYLFLEALISAQ 724 +R++P K+ L + YP + ++L+ KP+ GD +R +D L+ + A Sbjct: 696 NLRNLPGKLHIFLNADHDRYPARQNDERYNLIHLDKPRPGDNNREHEDLGALLDLINRAG 755 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD--EALNCDESEARVKAHLTC 782 L++ Y S DN + P+ VQEL+ Y+ H A ++ + H Sbjct: 756 DALWLYY--NSHHDNEPQPPASPVQELLQYLDDQHERASQHLRASGRLDAGQTLPRHYHT 813 Query: 783 LHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETL 837 H PF P ++ + A P+ P L Sbjct: 814 EHPADPFQPDAHETRPAPLWENIRTTLQQNTPTATETSPPPVGEGWGGVRPQTAL 868 Score = 84.2 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 107/378 (28%), Gaps = 20/378 (5%) Query: 751 LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 L G+ D + + + T + +P S ++ Sbjct: 886 LASAAGEGWGGGSDRKTTATVASSTNTSPETLANMPPSTREGGARPHAWLSNSQPAPQKT 945 Query: 811 SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 PE + L + R P A+ + + + EP Sbjct: 946 FLPLHIPPALAADAAPQNPENLTLAQIVRDLQKPASAYARAH-HIANTAAQTPPESREPL 1004 Query: 871 ILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR 930 L GL +Q +Q ++ AL + P G G+I E + + Sbjct: 1005 ALYGLDNWQADQHIIAALEQNHP--DPATHIARLPAYPGGISGQIQLEQRLATYRARQQT 1062 Query: 931 VIAC--RQPGQSM-EIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVY 987 ++ ++ E L L R S + WLEHL + Sbjct: 1063 LLDRADLATWPTLREQTLNLGEHSSLTALLPAHSPTWPRLSASRAKPKHHARYWLEHLAW 1122 Query: 988 CASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLK 1047 A+G +G + + D R PL A A L Q + L E +L+ Sbjct: 1123 NATGAHGTTLIHYADDTLLRLAPLPAADAQRQLHQWLAVREHLQKNLWLAPLELMQPYLE 1182 Query: 1048 TCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVE 1107 T + + ++ + + + + D+ ++ LWR I Sbjct: 1183 TFTTDK----------AADKQAALVRDWIHDDSHKNDDGDL-WRHLWRGNENILAANIAA 1231 Query: 1108 QSQR---FLLPLFRFNQS 1122 L PL ++ Sbjct: 1232 ALATHAPLLQPLLEHGET 1249 >UniRef50_A7BX05 Exodeoxyribonuclease V gamma chain n=1 Tax=Beggiatoa sp. PS RepID=A7BX05_9GAMM Length = 458 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 142/475 (29%), Positives = 241/475 (50%), Gaps = 38/475 (8%) Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISA 723 + PMRSIPFKV+CLLGMND YPR LGFDL+++ PK GDRSRR +DRYLFLE+L+SA Sbjct: 1 MRPMRSIPFKVLCLLGMNDQTYPRPSKSLGFDLITKHPKPGDRSRRQNDRYLFLESLLSA 60 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 + YISY+G SI DN+ PSVLV EL+DYIG++ P + ++ Sbjct: 61 RDYFYISYVGHSIHDNTVMPPSVLVSELLDYIGKAFISPH----------QNLLDNIIIH 110 Query: 784 HTRMPFDPQNY--QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP--------ETVP 833 H F P+ + S++ E+ A+S + +LP +T+ Sbjct: 111 HPLQAFSPRYFNETDKHLFSFSDEYCHASSVLLNERQLAKDFIAESLPPPQPEANWKTLD 170 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD 893 + RF+ +P RL + ++E + ++EPF + GL RY++NQ L+ +E D Sbjct: 171 INRFARFFKNPSEFLLTERLGIKLQSETHLLGESEPFEVRGLERYKLNQTLVEKSLEGVD 230 Query: 894 AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA---CRQPGQSMEIDLACNGV 950 + +A+G LP+G G+ + ++Q +RV ++ +++ ++L + + Sbjct: 231 LHEYHKIAKASGQLPHGGIGDYAYSKLVGQIQPFVERVQQATTRQKKRETVLVNLTIDDM 290 Query: 951 QITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN--GESRLFLRKDGEWRF 1008 +ITG+L ++ D L+ +R + L +QLW+ HLV + L + ++G W F Sbjct: 291 RITGYLGRLWHDNLVHYRCAKLKATDFIQLWIHHLVLNSLPEQKLPRHSLLIGEEGSWEF 350 Query: 1009 PPLAAEQALHYLSQLIEG-YREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKA 1067 P+ +++ L L++ Y +G+ PL P+S A+++ + T ++A Sbjct: 351 KPVN--ESIVILETLLKAYYWQGLMQPLSFFPQSSLAFVEQLTTGK---------TEEEA 399 Query: 1068 RTKFLQAYEGNMMVRGEGDDIWYQRLWR-QLTPETMEAIVEQSQRFLLPLFRFNQ 1121 ++ + GN GE D+ +YQ + + +P +++F P+ Q Sbjct: 400 FSRAQNTWRGNDFANGEFDNDYYQLCFGKETSPLDNGEFKILAKQFFEPMLAHLQ 454 >UniRef50_Q67MD4 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Symbiobacterium thermophilum RepID=ADDB_SYMTH Length = 1165 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 143/1034 (13%), Positives = 269/1034 (26%), Gaps = 186/1034 (17%) Query: 34 MILVQSTGMAQWLQMTL--SQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSM 91 ++LV Q ++ L S + W + ++ Sbjct: 34 ILLVPEQATFQ-VEQALLGSGRLKGIIRAQVLSFQRLAWRVSLKAGG------------- 79 Query: 92 SWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF-------QLSSKAADLFDQYLVYR-- 142 LP L + +LR L D +LF + A + YR Sbjct: 80 -----LALPPLSDLGKQMVLRALLEKKRDDLRLFHQVADKPGFIERVAGSIRELRSYRQG 134 Query: 143 PDWLAQW-----ETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETL 197 P+ L + G LG A + L Y ++ L Sbjct: 135 PESLRRQLSQLEAEGLGETSLGAKLHDLALVMDELRSYIEGRFTDP-------DEYLTVL 187 Query: 198 ESATTCPPGLP-SRVFICGISALPPVYLQALQALGK--HIEIHLLFTNPCRYYWGDIKDP 254 + L + V++ G + P L L A+ + L P + Y Sbjct: 188 AARLEESRLLEGAEVWVDGFNGFTPQELAVLGAVMRSARQVHISLCIPPGQLY------- 240 Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLL 314 + D+ +P+L+++ L Sbjct: 241 ------------------------------KAGGHHSPSDLFHPVLSTY--------DQL 262 Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSI 374 L + + + + L A ++E + + I Sbjct: 263 MQLAAESGVAVDPPLYLNEPLRF---------RGAPELAHVERYLFRQSAPAWPGAPERI 313 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + + EV +L ++ + L R+I V+ D++ Y +F Sbjct: 314 ALVEAQNRREEVAAAAREILRLV-REEGLRFREIAVVARDLEGYGDLAATLFAE----HG 368 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P I RR HP++E + L + + V L + + L Sbjct: 369 IPAFIDRRRTVAHHPLVELLRAALEVVVQDWAYGPVFRYLKTDLTGVSR----AEIDLLE 424 Query: 495 QWVNESGIRWGIDDDNVRELELPA---TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 +V E GIR L + LL + +L + Sbjct: 425 NYVIEHGIRGRAWQQQEPWQYLRRYTLEEDAVPAGPAQQALLDEIHRIRRRATAPLLAFQ 484 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + + L L R LE W D ET Sbjct: 485 RRLQRRGRPGPTVREITTYLFQLLDDLKVARQLEAWKAEAEQ------RGDLETAREHEQ 538 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSI 670 + + + + + + + L+ LD ++ V + T+ R Sbjct: 539 VWTRVLELFDQIVEGLGDQVLSPKVYLQVLSAGLDGLKLGLIPPGLDQVIVGTVERSRHA 598 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR---------GDRSRRDDDRYLFLEALI 721 + +LG + +P Q A ++ + R +++L AL Sbjct: 599 GVRATLILGATEKDFPPQPAEDAIFTDRERERLKQSGLDVGPTSLERLFQEQFLTYVALT 658 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ------------------------ 757 L+ISY PS +V + + Sbjct: 659 RGSDFLWISYPLADE-SGRAAAPSPVVGRMRRLFPELKPRPAAPPAPDAEAAVAQVATPR 717 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH 817 AL S V+ H L+ + DP ++ G A + + G Sbjct: 718 QLAAAVARALRRARSGYAVEPHWLDLYQCIVLDPDLHREGAAVLAAVGYEEWLRRRGTPV 777 Query: 818 SEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIPDTEPFILEG-- 874 + L + + L+ F + P R F L++ R E + P+ F Sbjct: 778 GRELARLLYGDRLVTSVSRLEAFLSCPFRHFAGYALRLQGRAEFTVSAPEFGLFYHAALS 837 Query: 875 -----LSRYQINQQLL--NALVEQDD-----AERLFRRFRAAGDLPYGAFGEIFWETQCQ 922 L R + L + + D + + + T Sbjct: 838 LFVRELERDGLAWDTLTPDEAWRRMDSIIDRLAPRLQSEILLSSPQHRYLLRVIRRTLQS 897 Query: 923 EMQQLADRVIACRQPGQSMEIDL---------------ACNGVQITGWLPQVQ----PDG 963 + L++ V+ ++E+ V + G + +V DG Sbjct: 898 SLDYLSEHVLHGEFRPVAVEVPFGEEMDGLPPVEVDLPGGGRVLLRGRIDRVDALEGRDG 957 Query: 964 LLRWRPSLLSVAQG 977 R + Sbjct: 958 RWYVRVIDYKSGRR 971 >UniRef50_Q0TN58 ATP-dependent DNA helicase PcrA n=12 Tax=Clostridium RepID=Q0TN58_CLOP1 Length = 751 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 61/512 (11%), Positives = 147/512 (28%), Gaps = 82/512 (16%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIY 312 L + + ++ + E A L VG+ + G D Sbjct: 202 NDVLEFYQNKFKYIMIDEYQDTNKAQYEFAKLLAAKHKNICVVGDDDQCIYAWRGADIRN 261 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDP 369 +L F P+ + ++ + N A + + + R Sbjct: 262 ILD----------FEKDYPEAKVVKLEQNYRSKGNILEAANKVIKNNAERKFKILRTEQV 311 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 I+ H +S + E + + + + D +D V+ F A Sbjct: 312 EGEKISIHRAYSDKMEAAFVVSEIEKL-KNDNGYKYKDFAVLYRTNAQSRN-----FEEA 365 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY I ++ ++ L + + S + +++VP + I + Sbjct: 366 LRRAGIPYRIFGGLKFYDRKEIKDILAYLKIIVNPKDSISLRRIINVP----KRSIGDTT 421 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + L+ A E + +L Sbjct: 422 VEKLQNH---------------------------------------ATEIDDTLYNVLLD 442 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 D GL A + + + ++++ + + + + Sbjct: 443 VDYVPGLTARSINPIKKFTDMMEEIM-VMSEQLSVSQLIEYVLEKTGYLKSLKDSKLIED 501 Query: 610 TLIEQQWQAIIAEGLGAQY--GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + + ++++ + + + LS +++ L Q+ V + T+ Sbjct: 502 QSRIENLEELVSDAVEFEKSNEEDKSLSAYLEKV--ALVQDMDDLEAEDNYVMLMTVHSS 559 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F V L+GM +G++P + + ++ R L + A++KL Sbjct: 560 KGLEFPTVFLVGMENGIFPNAACFEHDN------------QMEEARRLCYVGITRAEEKL 607 Query: 728 YISYIGRSIQDNSERF--PSVLVQELIDYIGQ 757 Y++ + S + E+ I Sbjct: 608 YMTSAETRMIFGKTVAYGQSDFISEIPANIKD 639 >UniRef50_A6LPC3 ATP-dependent helicase/deoxyribonuclease subunit B n=7 Tax=Clostridium RepID=ADDB_CLOB8 Length = 1159 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 124/1083 (11%), Positives = 294/1083 (27%), Gaps = 182/1083 (16%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-FGIAANIDFPLPA 66 + ++ ++++ F ++LV L + + Sbjct: 13 GKSKFCIDEIKNNIDKKLD---FNKLILLVPEQYTFMTENKILHEIGENAFFRTEVLSFK 69 Query: 67 SFIWDMFVRVLPEIPKE-SAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF 125 ++F + + + + +++ + L+ Y S ++ Sbjct: 70 KMAHNIFEEYGGRVKEIIKESGRNMLIHRVINENIEFLD---------YFNRMSREQGFN 120 Query: 126 QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWH 185 ++ S+ F +Y + + + E A L++ + E Sbjct: 121 EIISEVISEFKKYNIS----------IDSIRAIDEKIND-AELYQKVKELMI-------- 161 Query: 186 RANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCR 245 +Y+ F + +I G L Sbjct: 162 ---IYEAFNLKMHEN-----------YIDGDDELT------------------------- 182 Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN----SDGEQDVGNPLLA 301 + D L ++ + + L + + N L Sbjct: 183 -----LLDKKLLESSAYVDSEVWIDEFTSFTPQQLDIIKVLAKRCRRVNITFCIDNKSLN 237 Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 + + D ++ E+ + + N+ + I + +IE++ S Sbjct: 238 NNSEDITDVFNIIKSTENKILKIMKENNIAYDKPVNLNNAIPYRFKGNLELDHIEKYFFS 297 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 D SIT + + E+E + + +++ + RDI V+ +ID Y Sbjct: 298 YPFNEYDKNPESITLYKASNIYDEIERVSKSITSLV-RENGYRYRDISVVCRNIDDYEKI 356 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 I +F +PY + + S+P++ S + + E V L + Sbjct: 357 ISVIFKDY----NIPYFLDKKIQLLSNPLIVLISSAFEILLKNWSYESVFKYLKSGLTG- 411 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 I + L ++ E G++ + W G + + Sbjct: 412 ---IDNSYIDRLENFILEYGVKGY-------KWTSKEIVNEKWFRGNGELTDDKVL--IA 459 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 + + + + + + + + + EW+ ++ Sbjct: 460 EIMEEIRYPLMTFHNKVNGKHKVKDICSAIYEFLVDVKVFDRINEWIKNFEELGLE---- 515 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVN 660 + + +E II + + + + S L+ E I +A VN Sbjct: 516 --DKVKEYSQVESIVIDIIDQAVDVIGEERLEYSEFFRILSSGFANEEIGIIPVALDQVN 573 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD---------RSRRDD 711 I + ++ KV+ ++G+NDGV P G + G+ R++ + Sbjct: 574 IGDIARIKGRDVKVLYIVGINDGVLPASKKEEGLLSDRDRTTLGEVGINLSSTTRNKVFE 633 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG-------- 763 ++YL AL + + L +SY + PS+++ + Sbjct: 634 EQYLLYMALTISSEYLMLSYPMADF-EGKSLRPSIVISRIKKIFPNLIEESAIYDLKILE 692 Query: 764 ---DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK----- 815 + + + + + + +P + E E+ K Sbjct: 693 NKFGKIIAPIPTFNELIISMRKDFDKEYIEPYWSEVYEWFKNNDEFRDKVKNIFKGLSYS 752 Query: 816 -------AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE-IPDT 867 + + L+++ P F Q L+ R PD Sbjct: 753 NIGDKVSKNKLRKLYQNDLEKLVFSVSKLEKYAECPFSYFVQYGLKAKNRKVYEFTPPDL 812 Query: 868 EPFILEGLSRYQ-------INQQLLNALVEQDDAERLFRRFRAAGDL-------PYGAFG 913 F+ E L + + L+ ++ L + + Sbjct: 813 GSFVHEMLDSFTNKVREDGVLWSDLSNEKCKEIISNLIDKKLMDESNSILNSTKKFKYLA 872 Query: 914 EIFWETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQITGWLPQV 959 + F + + +A ++ E D V + G + ++ Sbjct: 873 QRFKRVISKSVSVIASQIGKGEFEVFKTEFDFGSYSSGEAITLDLNDNEKVYLQGRIDRI 932 Query: 960 QP---DGLLRWRPSLLSVAQGMQLW--------LEHLVYCASGGNGESRLFLRKDGEWRF 1008 DG R ++ LVY + + D + + Sbjct: 933 DKLDLDGETYIRIIDYKTGAKKFDLNEIYYGLQVQLLVYLDALIKNSKYIL---DKQVKP 989 Query: 1009 PPL 1011 + Sbjct: 990 GAI 992 >UniRef50_B0TWY9 DNA helicase II n=19 Tax=Francisella RepID=B0TWY9_FRAP2 Length = 742 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 70/614 (11%), Positives = 176/614 (28%), Gaps = 76/614 (12%) Query: 147 AQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPG 206 E G Q QA L K +++ + + L Q FI + Sbjct: 101 HAHELGLDKNFRILDQDEQAQLIKKVIKSLDLDDKKYPPK--LLQNFINKQKDKAVRSNK 158 Query: 207 LPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRR 266 L + I + L LL+ Y + + R Sbjct: 159 LTKQYDINYTHIYTAYEERLLLDNALDFADLLLYL-----YELFSLNQQLREYYQSLFRY 213 Query: 267 HSFEDRELPLFRDS-ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDA 325 ++ + + +++ VG+ + +G G + Sbjct: 214 ILIDEFQDTNQVQYMWLKLLVTDNNYMMAVGDDDQSIYGWRGAVVDN----------IHK 263 Query: 326 FVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSP 382 +V D + ++ + +N A + + + S + + + Sbjct: 264 YVADLNDVEIIKLEQNYRSTKNILKVANSVIKNNDNRMSKELWSAAEDGEKVEVYCAVNE 323 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + E + + D++ + D + DI ++ ++ V + +PY I Sbjct: 324 RDEAKYIIDKIRQLH--DGGVDYSDIAILYRSN-----YLSRVLEESCIYTSIPYRIYGG 376 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 ++ ++ L L + + +++ P I + L +R + + + Sbjct: 377 FRFFDRAEVKDALAYLRLAVTSNDNLAFERIINTP----TRGIGNKTLDTIRNFSQINNV 432 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 + W+ + + + Sbjct: 433 SY-------------------WQATIDIIQKEIVTKRTASLL-----------------L 456 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 ++ ++ + L+ ++ LE + +L ++ D E + ++ + + Sbjct: 457 KFIEIINAISSQIKDLSLDKLLETVINE-SGLLASYQEKDTEKDRQKIDNLKELISAAKD 515 Query: 623 GL---GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 + L L+ + V + T+ + + F+ V L+ Sbjct: 516 FEPQIELLDDNTDILQDFLSF--AVLEAGEMQADENTDSVQLMTIHASKGLEFRYVFLVA 573 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 +GV+P + + + + + ++R LF A+ A + L ISY Sbjct: 574 AEEGVFPPSSIINAEEAYTSSESKKIQEKLAEERRLFYVAVTRAMKALTISYAQVRNIFG 633 Query: 740 SE--RFPSVLVQEL 751 + S + E+ Sbjct: 634 RSSFQVKSRFLMEI 647 >UniRef50_D2R9Y0 Putative ATP-dependent DNA helicase PcrA n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2R9Y0_GARVA Length = 1023 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 62/545 (11%), Positives = 140/545 (25%), Gaps = 95/545 (17%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD----------------GEQDVGN 297 P + R ++ + E +L D VG+ Sbjct: 354 PEAAQYYRHKFRYILVDEYQDTNHAQYELIRELAGVDVKQNSANPSQQNNTPASITVVGD 413 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVN 354 + + G D + F P+ ++ + + + A A ++ Sbjct: 414 SDQSIYAFRGADIRN----------IQDFEKDFPNATTIMLEQNYRSTQTILDAANAVIS 463 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 + + + IT + S Q+E + + + + + D+ +M Sbjct: 464 HNQGRKPKKLWTALGKGTPITGYAADSAQQEAAWVAQEIARL-AGEEGVAYSDMAIMYRA 522 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 A LPY + ++ ++ L + ++ +L Sbjct: 523 NAQ-----SRSLEDALVKAGLPYQLVGGTKFYERREVKDALAYLQSMANPDDDVNMRRIL 577 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 +VP + +L Sbjct: 578 NVP-------------------------------------------KRGLGARAEALLTL 594 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP-LEEWLPVCRD 593 YA WQ++ + G+ L ++ + + + + + Sbjct: 595 YAQTQGVSFWQALEHLESIEGMPTRTATKLKEFRELMHNLITCMQNDDSKPSKVIDSILN 654 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA-VPLSLLRDELAQRLDQERISQ 652 + + + + ++ + A D +++ Sbjct: 655 DSGLLEDLQRSEDPQDAARVDNLSQLQSVAAEYEQNTPDASVAGFLETTALVADSDQLPD 714 Query: 653 R-FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 G V + TL + + + VV L GM G +P D + Sbjct: 715 ENEDTGKVTLMTLHTAKGLEYPVVFLTGMEQGTFPHS------------RALEDDGELCE 762 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNC 769 +R L + A+Q+LY++ Q + PS + E+ D + D Sbjct: 763 ERRLAYVGITRAKQRLYVTRAAVRAQWGQAQDMLPSQFLDEIPDNLIDWKRRESDVERWG 822 Query: 770 DESEA 774 S Sbjct: 823 ASSRR 827 >UniRef50_Q4FSM9 Possible exoribodeoxynuclease V, gamma subunit n=3 Tax=Psychrobacter RepID=Q4FSM9_PSYA2 Length = 1512 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 196/995 (19%), Positives = 352/995 (35%), Gaps = 226/995 (22%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M + S+R + L + + + + FEP +++V S + WL T++ + GI+ + Sbjct: 1 MFTIIQSHRTENLVDQLL-VQYQSKNQPVFEPFIVIVPSMVLGDWLDKTIASRAGISTLV 59 Query: 61 DFPLPASFIWDMFVRVLP----------------EIPKESAFNKQSMSWKLMTLL---PQ 101 + W + VL +P+ + + M W+L L Sbjct: 60 RTKFWGQYQWTLMQDVLTRHNAYLLEIDPEAAILNVPEVAVLSPTVMQWRLFGYLTYYQA 119 Query: 102 LLEREDFTLLRHYLTDDSDKRK-------------LFQLSSKAADLFDQYLVYRPDWLAQ 148 L+ +++ + L D+ K ++QL+S A +F++YL +R DWLA Sbjct: 120 LIVKDETHPVNPLLASLIDEPKEGGEQDKAQQDARIWQLASDLARVFNRYLTHREDWLAL 179 Query: 149 WETGHLV----------------------------EGLGEAQAWQAPLWKALVEYTHQLG 180 W + E E + Q LW L HQ Sbjct: 180 WSHNKPLNVDELIADKDALSLRFDKYARGTPDWLVEHYVELEVAQRFLWSHLFADVHQ-- 237 Query: 181 QPRWHRANLYQRFIETLESAT-TCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 HR + F L+ LP + I I LP L LQ L ++++I LL Sbjct: 238 ----HRVTIENTFWSALKDNKANERAQLPKILRIFTIQQLPQTELDFLQRLSQYMDITLL 293 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 NP + +W DI D ++L + S +D G+ L Sbjct: 294 HYNPSKLFWADIVDKSWLQRQQ----------------------IINPESVFLRDYGHSL 331 Query: 300 LASWGKLGRDYIYLLSDLESSQEL--------DAFVDVT--------------------- 330 L+ GK RD +L++L +++ D F + Sbjct: 332 LSRLGKQSRDTFAMLANLSGNEQYQDELVEWQDNFENSDDGLNDDFGFSFDDSAYDVDDA 391 Query: 331 --------PDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP------------- 369 +LL +Q+D+L L+ ++ V S++ +K+ Sbjct: 392 NNSQITQNSPSLLRRLQNDVLMLDEQSTQQVTAATVSQAVSKQIEPSFDKEKPEMAWYED 451 Query: 370 ------------------LDSSITFHVCHSPQREVEVLHDRLLAMLEE-----DPTLTPR 406 D+S++ H CHS QR++EVL + L E + Sbjct: 452 EALENKRFERERFWVSSWQDNSLSIHSCHSLQRQLEVLRIMIGRWLNEPIKPGEKKRHIS 511 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLP-------YAISDRRARQSHPVLEAFISLLS 459 DI+V++ D++ + I ++F S L +D R + F LL Sbjct: 512 DIVVLLPDVERHHALISSIFVSGKGQDGLTLPAKVTGVVDADIRQLWEA--IIGFYKLLG 569 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL--P 517 +RF + +VL L +P L F +T E + + E+G G D+ ++++ Sbjct: 570 SHSARFEAPEVLDWLMLPPLFESFGLTHEQMSRGCDLLVEAGFIRGFDELHLKQTLDSND 629 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQ----------------GEWQSVLPYDESSGLIAELV 561 + ++ L R+ LG M A + LP + S A +V Sbjct: 630 FDYRFSFAQALDRLTLGLVMPEASLSDCLYPLAQDDWPSTTLPEMSLPLPQVSLNDAMIV 689 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 L + L R Q+ E+WL + + D + M I + Sbjct: 690 EALCRIYAGLVARRDDHRQKMKAEDWLDQIETEVIHRYFGDVDQTRTMRAIYNAMNGFKS 749 Query: 622 EGLGAQYGD----------------------AVPLSLLRDELAQRLDQERISQRFLAGPV 659 ++ + LS + D + L+ +++S G + Sbjct: 750 SLRANRHYKQYSSADSANKEVEQKLAGVEQLPLKLSFMLDSIESELESQQVSA-EPTGVI 808 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM-SQKPKRGDRSRRDDDRYLFLE 718 +R++PF++V +L MN +P + +DLM + +RGDR DDD FL+ Sbjct: 809 TFGRFGALRNVPFELVVMLNMNLSEFPGRERDNRYDLMKATNARRGDRVSEDDDNGAFLD 868 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR--- 775 AL+ A+ ++ Y G+S+ D E P+ + EL+ ++ + ++ Sbjct: 869 ALLCARSACWMFYNGQSLTDTHEHLPANPISELLQFLQGEIQWQVNSLETLPKNIDPTTE 928 Query: 776 ---------VKAHLTCLHTRMPFDPQNYQPGERQS 801 +K L H +PF ++ + Sbjct: 929 SLKRYLPKLIKQWLVTEHPALPFHESLFETEIEDA 963 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 55/184 (29%), Gaps = 23/184 (12%) Query: 961 PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLF-------------------LR 1001 P L P+ S ++ WL HL + + + Sbjct: 1325 PKQWLNILPNSASPRHLLKFWLSHLYWQVARRTTAEQAASNDGVSIWRFNKPSSQIKKYE 1384 Query: 1002 KDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDD 1061 K ++ P+ E A+ L + + P+ +LPE ++L C A+ Sbjct: 1385 KVTAFKLSPIVYEDAVVELIKWAVFAKLSGQVPITLLPEYALSYLDKCLQAEESGDEIGS 1444 Query: 1062 STLQKA--RTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPE--TMEAIVEQSQRFLLPLF 1117 ++A +Y + + +Q + R A+ +Q P+F Sbjct: 1445 YWPKRADFSDWLRPSYYSDTIYDTCSQHAIWQYVLRDQDAFKALSAALSTLAQPLYEPMF 1504 Query: 1118 RFNQ 1121 Sbjct: 1505 AALD 1508 >UniRef50_C0WAB3 ATP-dependent DNA helicase pcrA n=1 Tax=Acidaminococcus sp. D21 RepID=C0WAB3_9FIRM Length = 750 Score = 252 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 80/623 (12%), Positives = 186/623 (29%), Gaps = 79/623 (12%) Query: 193 FIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIK 252 I ++A + + +YL+ + + Sbjct: 145 VISNAKNAQLSSAAFARKADDFHAKKVAEIYLE-YEKRMRQNNAVDFDDLLLLSVDLLQH 203 Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASWGKLGRDYI 311 D K + + ++ + A + + VG+ + +G G D Sbjct: 204 DRDVREKYQHKFQYVMIDEYQDTNHVQYLLAKLISAPENNLCAVGDIDQSIYGWRGADIS 263 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLD 368 +L F PD ++ ++ + + + A A + R N + Sbjct: 264 NILD----------FEKDYPDAKIYKLEQNYRSTQVILDAANAVIEHNSARRPKNLWTEN 313 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 IT+ + + E E + + ++ D+ V+ +F Sbjct: 314 GNGKPITYFQAFNDRNEAEFTVHNMRRL-RDEAHFHLGDMAVLYRTNAQ-----SRMFEE 367 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 LPY + ++ ++ L L + + + +++ P + I Sbjct: 368 TLIKNGLPYIMVGSLKFYDRKEVKDLLAYLRLLVNGRDEQALERVINEP----KRGIGSA 423 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + L+ +NE+G+ + L G Sbjct: 424 TVEKLKMLLNETGL--------------------SLHEALKAPSAG-------------- 449 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 E G V ++LL L + E+ + + L +A L +E Sbjct: 450 ---ELLGRSLLKVTAFSTLLESLRKETDTVPVEQLMTDILEK-TGYWDALLLEGSEQARG 505 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + + I E + + L + +A D + V + TL + Sbjct: 506 RMDNLDELKRIAMEFQEDENEEEKTLEDFLNHVALVSDIDDAKL--SRDAVTLMTLHSAK 563 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F VV + GM +G++P Q + D + +++R L + A++KL+ Sbjct: 564 GLEFPVVFMAGMEEGLFPSQRS------------LDDTDKLEEERRLCYVGITRAKKKLF 611 Query: 729 ISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 ++ + PS ++E+ ++ ++ + + + + R Sbjct: 612 LTSCRSRMMYGRTVMFPPSRFLEEIPRHLIETALVGQQDGSGAQRAAWENRPQEEGSGLR 671 Query: 787 MPFDPQNYQPGERQSYAREWLPA 809 + +R+ E++P Sbjct: 672 SIARRRGASILDRRDRRSEYVPD 694 >UniRef50_B1HN89 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Bacillaceae RepID=ADDB_LYSSC Length = 1169 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 135/1082 (12%), Positives = 288/1082 (26%), Gaps = 168/1082 (15%) Query: 13 LEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID--FPLPASFIW 70 + + ++ + L P I+V M+ + L+ + G+ I W Sbjct: 18 IHQEIVEQLKSDPLGHPI---FIIVPDQ-MSYSTEYELTNRHGLQGLIRAQVMTFKRLAW 73 Query: 71 DMFVRVLPEIPKE-SAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSS 129 + KE + + + + KL+ ++ +F+L R ++ L Sbjct: 74 LVLQETGGIARKEVNGYGYRMLIRKLLEE-----QKSEFSLFRQAAGKRGFTEEIETLLK 128 Query: 130 KAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANL 189 + F +Y V E+ ++ QA L+ L +LG Sbjct: 129 E----FSRYSVNSSVLAEVKESLKAIDAPNTLQAKTNDLYVVLQALEERLGTTYVDSEGY 184 Query: 190 YQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWG 249 Y E L+ A T + ++I G +A L+ ++ L K + + Sbjct: 185 YPILTEQLKYAETMKQ---ATIYIDGFTAFTVRELELVRELLKVTK------HVTVVLPF 235 Query: 250 DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD 309 D D A+ + L + + + ++ DV PL + + Sbjct: 236 DHIDEAFDEQALFHEAALTNQRLHDIA------------NEEGIDVEPPLHFYYTQR--- 280 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 L +++++ + Sbjct: 281 --------------------FQSEDLQHVEANFANMVP------------------HTKK 302 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + + + EV + + + + +DI+++ + Y P I ++F Sbjct: 303 TSGDVMVFEASNRRAEVHAIAREITKL-TREYGYRYQDIVLLYRQAELYDPLITSIFQQY 361 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF---DIT 486 +P + ++ HP++E S L + S + E V + + I Sbjct: 362 ----EIPIFTNTKKTMLHHPLIELSRSALEIMTSNWKYEPVFRSVKTDLFFPLQAELTIW 417 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 E L + GI +G + + + Sbjct: 418 RERADRLENYCLAQGI-YGERWFEEPRWFYKKYRGLEFHSRVQTDEERAMQAEIEAIRDE 476 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 + +S + + L L L+ DA Sbjct: 477 IRQPLKSLQDKLSIASTGKDIATALFELVESLQVYEKLQAMKDR------ELERGDALAA 530 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLM 665 + +W ++ + + + + L + D S+ V + T+ Sbjct: 531 SEHEQAWNEWINVLDQFVYMFGEQEMSVEEAAKILDEGFDTLEFSRIPPTLDEVMVATVD 590 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP---------KRGDRSRRDDDRYLF 716 R KV +LGMNDGVYP ++ G +++ +R + +LF Sbjct: 591 LARLSNIKVAFVLGMNDGVYPTRMEYEGLLSDTEREWFSQIGYELAPTSSNRLLQENFLF 650 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQ---------------ELIDYIGQSHYL 761 A + KLY++Y + S+ ++ + + L Sbjct: 651 YRAASTPSNKLYLTYPTADE-EGKALLSSLYIKKFIGNDKIAGLLSGVQAERVVMDPIEL 709 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQ-----------NYQPGERQSYAREWLPAA 810 + AL AHL + + Q Sbjct: 710 LDESALPYLRHPRTALAHLMVQLRQAEHSRELAPEWLALQKFYQQDPYWALIFDRVHYPI 769 Query: 811 SQAGKAHSEFVQPLPFTLPETVP--LETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIPDT 867 + +A + + + +++++ P F L++ R E E Sbjct: 770 THKNEAEPLETYITQELYGQKLTSSVSRIEKYFRCPFSHFTTYGLRLEERAEYRLETFAM 829 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAERLFR--------------RFRAAGDLPYGAFG 913 E L L + +++ + Y Sbjct: 830 GDLFHEALKWITEETHRLQLSWIRLTKQQIKQLARQAVEQIVPVFSHQILLSSARYRYIQ 889 Query: 914 EIFWETQCQEMQQLADRVIACRQPGQSMEIDL----------------ACNGVQITGWLP 957 + M L ++E + + + G + Sbjct: 890 RKLIRIVERTMMALTQHANVSHFKPIAIEASFGPGQHEQLPPLEIDLTSGKKMFMRGRID 949 Query: 958 QVQP---DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAE 1014 ++ D R + E VY + L + + + P E Sbjct: 950 RIDSATIDDRSYLRIVDYKSSARDLDLNE--VYYGLSLQVLTYLDVAMENSTYWLPGETE 1007 Query: 1015 QA 1016 A Sbjct: 1008 PA 1009 >UniRef50_C4G8W0 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G8W0_9FIRM Length = 1199 Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 135/1061 (12%), Positives = 284/1061 (26%), Gaps = 119/1061 (11%) Query: 16 LMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK-FGIAANIDFPLPASFIWDMFV 74 + + R ++P +++V + +++ I N+D + +F Sbjct: 13 YLFDQILRRAKEEPKRHFIVIVPEQFTMSTQRELVARSSQKIIMNVDVLSFNRLAYRVFE 72 Query: 75 RVLPEIPK-ESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAAD 133 ++ K + ++ ++ T+LR + ++ L ++ A Sbjct: 73 ETGTKLDDVLEDTGKNLLLRRVAQE-----HEKELTVLRGNVRRPGYIDEIKSLLTEMA- 126 Query: 134 LFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRF 193 QY + ++ E + + +++A E + Sbjct: 127 ---QYGIGPKEFADLAELTDMGSSFRRKAEDLSVIYRAFREAIEGRYITA-------EEV 176 Query: 194 IETLESATTCPPGLPSRVF-ICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIK 252 +E L + V I G + P+ Q L + + + D Sbjct: 177 LERLAQLMDQSALIKDAVIAIDGFTGFTPIQKQVLAQMMRLASSIYVTLTM------DPG 230 Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIY 312 + + L + E E + EN + GNP AS L Sbjct: 231 ERITGSHLDYELFAMTKEMGEGLVRLAGENRCPIEEP--VCLTGNPRFASAPMLAYLEAN 288 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS 372 L + + Q+D + A + + + S + DP Sbjct: 289 LFRPKSRPYGKELSGLDGKETA-GCSQAD---TKETASCAQSDAKENASRAQGESDPKMR 344 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 I S + E+ + + + D RD ++ A++ Y+ + +F Sbjct: 345 QIRLGRAASFRDELAFAGEEIRKKI-RDQGGRYRDFAIVCANLSDYADYAGQIF----DK 399 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 LPY + + HP++E +S LSL F E ++ L + I Sbjct: 400 MDLPYYLDQEQDILFHPLVEFILSSLSLFTEDFSEESLMQQLRSGLAG----IDPSDADL 455 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L ++++ IR R + L + QS+ + Sbjct: 456 LERYIHARRIRG--FARYRRPFSGRVRNFSQEQMLRVEQLRKGIVADISDFRQSMCEENA 513 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 + A + + + + E LE CR D + + + Sbjct: 514 VTRDRA----------LAIYAYLQAHEVEEKLEARANACRA------EGDEIAASIHSRV 557 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIP 671 + + + + LS L L + + V I L R Sbjct: 558 FGLVMETLEKMSDLLGEEKMSLSDFAQLLEAGLRAISVGTVPPSFDSVVIGDLERTRLEH 617 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR---------GDRSRRDDDRYLFLEALIS 722 K + +LG +D PR G +++ K GDR R R+ AL Sbjct: 618 IKTLYVLGASDAAIPRSAESSGLFSQAEREKLREKQIDLAPGDRERAFMQRFYLYLALTK 677 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 ++L +SY S D S S L+ + + + A Sbjct: 678 PSEQLVVSYARLS-SDGSALRESYLIGLICRLFPGLGVENLEGRADLQRLVTAPAALDYL 736 Query: 783 LHTRMPFDPQN-------YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV--- 832 + + + + F + L E + Sbjct: 737 PDALRSLSEKEPSREEGQLACAIYEVLKEDKNFTDRAEELFKTAFSEQGQDRLSERLIKR 796 Query: 833 --------PLETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIPDTEPFILEGLSRYQ---- 879 + L++F + + L + E + D + L + Sbjct: 797 VSGDLIQGSVSRLEQFCRCAYAYYLRYGLLLQEEEEPEIDFLDMGNLHHQTLEFFSKRMK 856 Query: 880 ---INQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQE-------MQQLAD 929 ++ + ++ + E FR + + + + L + Sbjct: 857 ERKLSWKEISDSDAEALLEEAFRNAVGQMERAELLENRRQAQVIRRMKSVLRCSIWALRE 916 Query: 930 RVIACRQPGQSMEIDL--------------ACNGVQITG---WLPQVQPDGLLRWRPSLL 972 +V + E+ +Q++G + ++ + + Sbjct: 917 QVTRGDFVPEEFEMSFGPRDQLSSMRFQLGEREKLQLSGKIDRVDCMRTPEGIYVKVMDY 976 Query: 973 SVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAA 1013 L K G A Sbjct: 977 KSGNQKLDLTRLYHGLQIQLVLYMSAALEKLGRGEKKAHPA 1017 >UniRef50_A8SUE8 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A8SUE8_9FIRM Length = 789 Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 81/618 (13%), Positives = 175/618 (28%), Gaps = 87/618 (14%) Query: 166 APLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGIS-----ALP 220 L + + ++ + + L+ P P ++F+ IS + Sbjct: 106 RILRRYADKIGYEKNFDIYDSDDQKSTVKSILKDFQIDPKRYPEKMFMSEISKAKEKYMS 165 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 P A + Y G +K + + + + Sbjct: 166 PDEFARRNA-ADYAA--TKVAEVYTEYQGRLKKNNAMDFDDLIYKTVELFEHNPDVLDTY 222 Query: 281 ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV----------- 329 +N + D QD + L R Y L + Q + F Sbjct: 223 QNRFRYIMVDEYQDTNHIQFLMVKMLARKYRNLCVVGDDDQSIYKFRGANITNILNFEKE 282 Query: 330 TPDNLLHNIQSDILELENRAVAGVN---IEEFSRSDNKRPLDPLDSSITFHVCHSPQREV 386 D + ++ + N A E + I+F C + E Sbjct: 283 YEDAKVIKLEQNYRSCGNILAAANAVIQHNEGRKDKALWTDQDAGEKISFDQCDTEYAEG 342 Query: 387 EVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 +++ R+ ++ + + RDI ++ V G +PY + Sbjct: 343 DLVASRIKTLVRQ--GVGYRDIAILYRTNAQ-----SRVLGEKMVYANIPYRVYGGTNFY 395 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 + ++ ++ L + ++ + +++VP + I E L + + + G Sbjct: 396 ARKEIKDVLAYLKVINNTTDNLYFRRVVNVP----KRGIGEASLSKVESFADAYG----- 446 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 + DE G+ + G + Sbjct: 447 ----------------------------------LSMMDAAARADEIPGMAVKTSGKIKQ 472 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 + +R L L+ + AE + + + + Sbjct: 473 FATLIQSFRDMLQDGESLDAVYDRILEDTGYESELIAEHTEESMTRLENIDELRNKVVEF 532 Query: 627 -QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 + LS +E+A D + +S V + TL + + F V + GM D V+ Sbjct: 533 VDENEEAGLSEFLEEIALVSDLDSMS--EDDNQVKLMTLHSAKGLEFPYVFICGMEDRVF 590 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF-- 743 P +A D + +++R L + A +KLY+S + + Sbjct: 591 PSGMALNSDDPDA----------LEEERRLCYVGITRAMKKLYLSAARERMMHGNRISSD 640 Query: 744 PSVLVQELIDYIGQSHYL 761 S ++E+ + + Sbjct: 641 VSRFIREIPPLLFEHEAD 658 >UniRef50_B1C8W2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8W2_9FIRM Length = 741 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 64/566 (11%), Positives = 156/566 (27%), Gaps = 86/566 (15%) Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 + L + + LL N P L K R + ++ + Sbjct: 177 AEYQKRLLSSNAMDFDDLLLNMNILFAKC-----PEVLNKYKNRFKYILVDEYQDTNLSQ 231 Query: 280 SENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNI 338 +L G+ + +G G +L F + D + + Sbjct: 232 YAIVSKLAEDHRNICVCGDDDQSIYGWRGASIRNILE----------FEEDFEDAAVIRL 281 Query: 339 QSDIL---ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA 395 + + + N A + + + I + +S E ++ + Sbjct: 282 EQNYRCTKNILNAANGVIEHNQRRMGKTLFTDNDEGEKIKYLNANSDLEESSLISREIFC 341 Query: 396 MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 + E + DI ++ + R +PY I ++ + Sbjct: 342 L-NEYHGIPYSDIAILYRTNAQ-----SRMLEEGLMRRNIPYQIVAGTKFYDRMEIKDIL 395 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 + L L + ++ +++ P + I + ++ Sbjct: 396 AYLKLIVNPQDDLALIRVINTP----KRGIGPASVEKIKD-------------------- 431 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 YA ++ + D S + L + + R Sbjct: 432 -------------------YAFMKGTSMYEVIKHIDSSPLFKGAIKEKLMNFRDTIEEIR 472 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY-GDAVPL 634 R L + L + + + + + + ++ + + L Sbjct: 473 R-LPENNGLMDIVINTIHLSGYEEMLKEGKVENASNRLENLDELVNAAGDFESNEEENTL 531 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 + L S + V + TL + + F +V + GM + ++P Sbjct: 532 EAFLE--NAALVAGVDSYDEDSSKVLLMTLHNAKGLEFNIVFMPGMEENLFP-------- 581 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELI 752 + S +++R L + A+++LY+S R PS + E+ Sbjct: 582 ----TYRAVNEDSEMEEERRLCYVGITRARKQLYMSSAESRRVYGRNEYRNPSRFLLEVP 637 Query: 753 DYIGQSHYLPGDEALNCDESEARVKA 778 D + + + + + ++ +K Sbjct: 638 DELIEGTNVIKESNKEKELLKSSIKR 663 >UniRef50_C0EV12 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EV12_9FIRM Length = 1134 Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 145/1041 (13%), Positives = 290/1041 (27%), Gaps = 169/1041 (16%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF--GIAAN 59 LR+ + V R +++P + ++V + +Q + +K N Sbjct: 3 LRLITGRSGQGKTEYLVQEVIRLSMENPQQKYYVIVPEQFSLE-MQRKMVKKHPRHGFFN 61 Query: 60 IDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 ID + +F L + +LR L++ Sbjct: 62 IDVLSFHRLAYRIFDECG------------------YQPGEILEDLGVSMMLRKILSEGE 103 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWL---AQWETGHLVEGLGEAQAWQAPLWKALVEYT 176 + F+ S K A D+ +++ WE V + K L Sbjct: 104 NNFLYFKKSMKKAGFIDELKSMLMEFIGYGVTWEQVEEVSEKLGENKALSNKCKELGRIY 163 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVF-ICGISALPPVYLQALQALGKHIE 235 + R + ++ ++ P L + VF G + PV L L+ L K Sbjct: 164 EHFDKAIEGRFMVTEQILDVAREFAKEAPMLTNAVFYFDGFAGFTPVQLAFLKELLKVAG 223 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 + + + + Sbjct: 224 --------------------------QINVTITIPEFVP-----GQRGMPEDLFTSSKKT 252 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 G+ LL +L E+ QE++ V + I + + Sbjct: 253 GDALL------------MLCQ-ENMQEVEEVVKLDTPVSPRFINN---------PELAFL 290 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 E+ ++++ I VCH+P E + + ++ ++ + RD V+ D+ Sbjct: 291 EKNLFQNSRKIYSKKIERIHMTVCHNPDGEADYVMHKIEQLVRQ-KGYRYRDFAVLSGDV 349 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 Y+ F A +P ++ H +EA SL L + E V L Sbjct: 350 ADYAS----AFKRKAAILNIPVFEDTKKKVSYHSGVEAVRSLFHLAQMEYSYESVFRYLK 405 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 + +E YL +V +G+R L + + L +L Sbjct: 406 SGMSNLI----DEDADYLENYVLYAGVRGYSMWKKPFYRRLKNKDEAAIKALL--LLQEK 459 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 ME + + + S E++ H L + + +++ Sbjct: 460 FMEETENFCSVMRDKEASVRDKIEVLYHTMVKLSFEEKLKNQAQKAEENSDFVK------ 513 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 A + +++ + + + + + L + + LD + L Sbjct: 514 ----------AAEYRQLYDLLLSLMDKIVMIFGEEKMAVKELAEIVDAGLDALGLGVVPL 563 Query: 656 A-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR---------GD 705 V + L R KV+ + GMNDG P + G +K Sbjct: 564 TMDQVVLGDLKRTRLHEVKVLFITGMNDGKIPPNIEDRGLLSDEEKEVLKNCGISLSQSL 623 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE 765 + +D + A +LY SY D S PS+L + + + E Sbjct: 624 LEQSMEDEFYMYMAFAKPTDELYFSYSVTD-SDGSALRPSLLQKNISQLFPKLKRKQYPE 682 Query: 766 ALNC-----DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE------------WLP 808 ++S + T +N Y E Sbjct: 683 EERRYYFNLEDSREFLIESFLQAKTEPEKVRKNRAFVMLAKYWLEQSEGRKELEKYGHWI 742 Query: 809 AASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DT 867 + SE + + + + L+RF A P + F L++ R E P D Sbjct: 743 ENAYQEPELSEELLEQLYGKELSGSVTRLERFAACPYQYFCIYGLELREREEYKIRPIDL 802 Query: 868 EPFILEGLSRYQ----------------INQQLLNALVEQDDAERLFRRFRAAGDLPYGA 911 + L + + +Q ++ + E L F+++ Y Sbjct: 803 GNLFHKALECFSRKVKESEYSWKNIPDEVQEQYISEALHTAMDENLSDVFQSSSRNQYKI 862 Query: 912 FGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQITG--- 954 + + +Q L + + E+ + + G Sbjct: 863 --KTVERIMKRTIQVLRVHLKNSQFEPDRFELSFGKNKKLKEAEVPLEDGRKMFLQGVID 920 Query: 955 WLPQVQPDGLLRWRPSLLSVA 975 + + D + + Sbjct: 921 RVDTCEDDDEILMKVIDYKSG 941 >UniRef50_C8W206 ATP-dependent DNA helicase PcrA n=2 Tax=Clostridiales RepID=C8W206_DESAS Length = 737 Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 75/519 (14%), Positives = 152/519 (29%), Gaps = 81/519 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIY 312 P L + + R ++ + + L S VG+P +G G D Sbjct: 212 PNVLERYQHKFRYILVDEYQDTNYVQYLLVKMLAQKSRNLCVVGDPDQGIYGWRGADIQN 271 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDP 369 +LS F P+ + ++ + +N A +I + + Sbjct: 272 ILS----------FERDYPEACVVTLEQNYRSTQNILDAANHIISYNQGRKEKRLWTDAG 321 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 S I E + +++ + ++ + V+ V Sbjct: 322 KGSPIIVCKSRDEFAEARHVVEQIKHLHLV-EGVSYSECAVLYRTHAQ-----SRVLEEI 375 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 LPY I ++ I+ L + + + +++VP R I + Sbjct: 376 MLRYGLPYNIIGGLRFYERKEIKDVIAYLRVIVNPADEVSLSRIINVP----RRGIGDVS 431 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L + + E+GI G+ + Sbjct: 432 LTKIFAFAAEAGIPAGL----------------------------------------AME 451 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 E + A+LL L R + P+ + + + E Sbjct: 452 MAEQIPGLNGKARKQAALLGSLLQVWRRQQEFLPVTDLTVDILERTGYRQELEYEGTVEA 511 Query: 610 TLIEQQWQAIIAEGLGAQYGD-AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + + ++ L EL+ D +R + A VN+ TL + Sbjct: 512 RTRLENLEEFLSVTRLYDLETVEGTLGEFLSELSLVTDADRDNGE--AERVNMMTLHTAK 569 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F V L+ M +G++P D +++R L + A+QKLY Sbjct: 570 GLEFPFVFLVAMEEGIFPHN------------RALSDAGELEEERRLAYVGMTRARQKLY 617 Query: 729 ISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDE 765 +SY + + PS ++E+ + + + Sbjct: 618 LSYSFQRTIYGNTNYCRPSRFLEEIPVDLVSGAHPYEER 656 >UniRef50_Q83GZ5 ATP-dependent DNA helicase n=2 Tax=Tropheryma whipplei RepID=Q83GZ5_TROWT Length = 743 Score = 249 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 80/660 (12%), Positives = 191/660 (28%), Gaps = 93/660 (14%) Query: 152 GHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPS-R 210 G A Q + K + + T G A+ + + T L S Sbjct: 107 GKAKNFTIYDAADQRAIIKQICQSTDTFGLTASMVASQIGLLKNQMHTPDTYSRCLASNS 166 Query: 211 VFICGISALPPVYLQALQALGKHIEIHLLFTNP-------CRYYWGDIKDPAYLAKLLTR 263 ++++ Q + + + + L N + K P A R Sbjct: 167 TNGNSVTSITLQREQFILHVFRRYQEILKEANAFDFDDLISETVFLLQKSPEISAMYRNR 226 Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSD----GEQDVGNPLLASWGKLGRDYIYLLSDLES 319 + ++ + +L D VG+ + + G D +++ Sbjct: 227 WKYLLVDEYQDTNHAQYRLILELTKGDKSDMSLTAVGDSDQSIYAFRGADIANIVN---- 282 Query: 320 SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITF 376 F + PD ++ + +N +A + + + N + Sbjct: 283 ------FENDFPDCHTILLEQNYRSCQNILLAANALISNNQNRKDKNLWSELGAGEKVIA 336 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 + S + E + DR+ ++++ +L DI V V + + +P Sbjct: 337 YCASSAEEEGRFVADRVRHLVDQGESL--SDIAVFYRSNTQ-----SRVIEESLIRQSIP 389 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 Y + ++ ++ L++ + + + +L+VP Sbjct: 390 YRVVGGTKFYERAEIKDILAYLTVIVNPDDTLALRRILNVP------------------- 430 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 R R +E + T L+R+ SA+ + + Sbjct: 431 -----KRGVGTVSENRLVEFASARGITLMQALSRIDEINIQPSAKSALRDL--------- 476 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 + + L++ L + D + EA I Sbjct: 477 ----------FYLLNRFAGSSMPANELLDDLLKATDLLSRFNNTDDPQNEARKINIGDFV 526 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 ++ LS +A ++ G + + TL + + F V Sbjct: 527 DSVEDFAKE---NPGGTLSDFMTNIALMTSYDQSDDAP--GQITLMTLHMAKGLEFDFVF 581 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 L G+ +G+ P +++ +++ +++R L + A++ L++S+ Sbjct: 582 LTGLEEGILPHEMS------------LKEKNGIEEERRLAYVGMTRAKKVLHLSFSSYRK 629 Query: 737 QD-NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ 795 + + R PS E+ ++ + H + + + + + Sbjct: 630 RYTDGVRLPSRFWDEIPQHLLRWHSRFTHKRFTGPLYGFTARPAGESRQSVHVLKNRYPR 689 >UniRef50_A1AUN0 ATP-dependent DNA helicase PcrA n=10 Tax=Desulfuromonadales RepID=A1AUN0_PELPD Length = 762 Score = 249 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 71/533 (13%), Positives = 160/533 (30%), Gaps = 82/533 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIY 312 P + R + ++ + L VG+ + + G D Sbjct: 202 PEVRQRCQERFQWIMVDEYQDTNPVQYRLIRLLAGERRNLCVVGDDDQSIYSWRGADIRN 261 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILEL---ENRAVAGVNIEEFSRSDNKRPLDP 369 +L F PD + ++ + A A V+ R +P Sbjct: 262 ILE----------FEKDFPDVAVVRLEQNYRSTTTILKAAGAVVSRNIGRRGKTLWTENP 311 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 I +H S + E ++ ++++ + ++ V + A Sbjct: 312 EGEKIRYHRVESDREEARLVAREIVSL--RSRGIPLEEMAVFYRTNAQ-----SRLVEEA 364 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 LPY I + ++ ++ L + D+ + +++VP I Sbjct: 365 LVSEALPYHIVGGVRFYARMEVKDILAYLRILDNPADEISLKRIINVP----SRGIGGAT 420 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + + Q V SG + ++ Sbjct: 421 IDRISQRVASSG---------------------------------------ASFYAAMAE 441 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 S L + +AS + + +R +A L E + + Sbjct: 442 CAGSGLLGSGPRARVASFVDMMERFREMVALRG-LPELCQTVMEESGYLARLRESRDQED 500 Query: 610 TLIEQQWQAIIAEGLGAQYGDA-VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + + + ++A + LS ++++ D E+ Q + V + TL + Sbjct: 501 SERLENLEQLLAAMEEFCEKEPQAGLSAFLEQVSLVSDLEQGGQGKPS--VTLMTLHAAK 558 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F+ V ++GM + ++P A D M +++R L + A+++LY Sbjct: 559 GLEFRAVFMIGMEERLFPHVRALDDLDGM------------EEERRLCYVGMTRARERLY 606 Query: 729 ISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 + R E+ PS ++++ + P L + + + Sbjct: 607 LLNTRRRYLFGQEQCNPPSRFLKDIPAGLLDDGGEPSQPGLGFRSAAEQAGRN 659 >UniRef50_C1A8M7 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8M7_GEMAT Length = 820 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 64/524 (12%), Positives = 138/524 (26%), Gaps = 82/524 (15%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENA-GQLFNSDGEQDVGNPLLASWGKLGRDYI 311 D A A R R ++ + VG+ + +G G D Sbjct: 223 DEALRAHYQRRFRYLLVDEYQDTNAAQYRFVQLMGGGYRNVMVVGDDDQSIYGWRGADIR 282 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN---RAVAGVNIEEFSRSDNKRPLD 368 +L F P + ++ + N A A + R R Sbjct: 283 NILD----------FERDFPGARIVRLEENYRSTPNVLALANAVIAENTERRGKTLRATR 332 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 P ++T + E + + + +L + RD ++ Sbjct: 333 PAGEAVTLIEALDERDEADFIAETILTRMSRSDLAR-RDCAILYRTNAQ-----SRAIED 386 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A R +PY + + ++ L L + E ++VP Sbjct: 387 AFRRRNIPYRLIGAVRFYDRREIRDLMAYLKLVANPADDEAFRRAVNVP----------- 435 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + +L A+ + + Sbjct: 436 --------------------------------KRGLGDATIALLAEQAIAEGKPMLEMAT 463 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR--DMLNAFFLPDAETE 606 +D SG+ L + R E + + + E Sbjct: 464 RFDVLSGMRPAARAALEDFGNLVQRLRTMAVDAAVDELLRELVQVIKYADHLRAEGPEGL 523 Query: 607 AAMTLIEQQWQAIIAEGLGAQYG-DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLM 665 + + + PL + L A V T+ Sbjct: 524 ERIENVREMIAGAAEVVADEGGEVGLTPLDHFLQ--SSTLVAGVDKLDPNADAVTCMTMH 581 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + F +V + G+ DG++P D ++ +++R LF + A++ Sbjct: 582 NAKGLEFPLVFVCGLEDGLFP------------LARAAEDPAQLEEERRLFYVGITRAEE 629 Query: 726 KLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEAL 767 KLY++ + ++ + PS ++ + + + ++ Sbjct: 630 KLYLTCAEQRRRNGELMYSMPSRFLEVIKPSLAERGKTARAKSE 673 >UniRef50_Q0AXV2 DNA helicase/exodeoxyribonuclease V, subunit B n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXV2_SYNWW Length = 1124 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 138/1043 (13%), Positives = 285/1043 (27%), Gaps = 196/1043 (18%) Query: 16 LMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLS--QKFGIAANIDFPLPASFIWDMF 73 L+ +E+ D + ++LV Q + +S + GI ++ ++F Sbjct: 17 LVYQEIEKALQSDKKQTLILLVPEQYTLQAERDVISQLRLPGI-MRLEVLSFTRLAQNVF 75 Query: 74 VRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF-------Q 126 RV L E+ +LR + + S + L+ Sbjct: 76 SRVGGLTRVF------------------LNEQGKNMVLRRIVDECSSELSLYKKAIRQEG 117 Query: 127 LSSKAADL---FDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPR 183 ++ + L F Q + RP+ L + + E + +++ Y Sbjct: 118 FINQISQLMADFKQRHI-RPEDLQLDAEEMPDQIIKEKLKDISIIYQHFNRYMEGRYIDS 176 Query: 184 WHRANLYQRFIETLESATTCPPGLP-SRVFICGISALPPVYLQALQALGKHIEIHLLFTN 242 + +++ L L +RV+I G + P L+ ++ + + T Sbjct: 177 -------EDYMDLLIEKLEHYTSLKNARVWIDGFTTFAPQTLKIIEKIM----VMARDTT 225 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS 302 C D D A L + +LP Sbjct: 226 ICFTLDPDTWDIAEL------------DLFQLP--------------------------- 246 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 G+ R ++ +E+ VD P +L ++ ++E + Sbjct: 247 -GRSFRQIRAMVRKNALQEEIIQ-VDPRPAEML------------KSPEINHLEAELFAY 292 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 + +I + EVE +L +D+ V+ D+D Y I Sbjct: 293 PGKTFAKKPQNIELFAASNIYSEVEA--LAAEFLLLARQGYRWKDMAVVCHDLDRYGSLI 350 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 + F +P + +R SHP++E ++ L + + EDV L Sbjct: 351 RRTFRDY----GIPCFMDRKRDIMSHPIIELILAALEILSRGYRYEDVFTYLKTGF---- 402 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 D+T + + L + E GI+ ++ + ++ Sbjct: 403 SDLTVDEVEILENYALEYGIKGNKWKEDFSYGD------------------AESLIELNQ 444 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 + E G++ + + + L + LE+W Sbjct: 445 KRLLFTKPLEDLGVMLKGNNTIREMAQALFAFLERENIYSKLEKWTNDL------LARGF 498 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNI 661 E + + + I+ + + V L + L I V + Sbjct: 499 LEEASESSQLWNAMIEILKQMVEIMGEQKVNLKEFKRILEAGFLSLEIKIIPTTVDQVLL 558 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR---------RDDD 712 + +S K + ++G+NDG+ P G ++K ++ +++ Sbjct: 559 GDIQRSKSHDIKCLYVIGVNDGILPSLGREEGILSETEKEALQEKGLDLGYEREMIWEEE 618 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG---------QSHYLPG 763 R+L AL +++Y SY + PS+L+ +L + Sbjct: 619 RFLIYSALAKPAERIYFSYALADE-EGRALRPSLLIDQLRMIFPSLSLKTNLLEDRQWQL 677 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA---------ASQAG 814 + S + L + + W + Sbjct: 678 QMVATPESSFKHLVEKLRLGLDGKELEDFWWDVYRWYFEQESWQCSRKLLLQGLFHQNQP 737 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE-IPDTEPFILE 873 + V F P + L++F + P F + LQ R PD + Sbjct: 738 EPIEPQVSRRLFGTPLRSSVSRLEQFVSCPFAHFVRYGLQPQERKNYELNSPDLGLLFHD 797 Query: 874 GLSRYQINQQLLN--ALVEQDDAERLFRRF--------------RAAGDLPYGAFGEIFW 917 L + +L E + Y Sbjct: 798 SLLHFS--HKLRENNRQWLDLSKEECYAIIDTVVDEIVPSFGRGIFNSHPRYQYLLNRLK 855 Query: 918 ETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQITGWLPQVQ--- 960 + + L + + E+ + + G + +V Sbjct: 856 RISRRAVWILTEHIQQGDFKPWDYEVAFGRGGMLPAVEIDLENGEKLILEGRIDRVDLLE 915 Query: 961 PDGLLRWRPSLLSVAQGMQLWLE 983 + R Q E Sbjct: 916 FEESCYVRILDYKSGQQDFHLSE 938 >UniRef50_Q04UR0 Exodeoxyribonuclease V, gamma subunit n=4 Tax=Leptospira RepID=Q04UR0_LEPBJ Length = 1131 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 189/1197 (15%), Positives = 407/1197 (34%), Gaps = 154/1197 (12%) Query: 5 YHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPL 64 S L+ + + + ER + P +I+V ST M WL + LS+ G++AN+ F Sbjct: 6 ITSLSLEDMAVELSRNILEERKNSPLHSPVIVVPSTNMKLWLNLNLSRFSGLSANLRFLY 65 Query: 65 PASFIWDMF--VRVLPEIPKESAF-NKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 + + F L P + AF ++++ K++T L + + ++ LR +L + + Sbjct: 66 LEKALEEYFHLRANLDYDPFQRAFPSREATQRKILTFLIENVNSKETIFLRSFLENIT-- 123 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 + F LS+K L+ Y + R W+ W ++ Sbjct: 124 -RAFSLSAKLTSLYKDYELNRSSWIQSWAKEKGIDIP-----------------MISRRP 165 Query: 182 PRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 + + + Y RF + L P+ + + + + + + Sbjct: 166 SPFPQEDEYYRFQKVLYQKVFLNSKEPNTLVQFFLKEIQKDKTHSPRNFPSL--HLFCLS 223 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA 301 N Y G ++ + KL ++ N+ Sbjct: 224 NLADTYLGILESLSQKDKLP-----IYLYQFHTGYVSNANNSLGPERWSDS-------QT 271 Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 ++ ++ + + + L + +IL+ ++ Sbjct: 272 HIALRTASVPGII--FKNLESVHTYPK-----KLATL-RNILKGNQNCDNLQDL------ 317 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 D+S+ F SP RE+E + +L + +D LT D ++V D+ Y P Sbjct: 318 -------SQDASVRFWNAPSPYREMESAANDILYRINQDHRLTYLDFAILVTDMRVYRPA 370 Query: 422 IQAVF---------GSAP-ADRYLPYAISDRRARQSHPVLEAFISLLSLPD-SRFVSEDV 470 ++ VF A + +PY+++D +A ++ + + + + + Sbjct: 371 VEWVFDGGILLQTKADADPIRKKIPYSLTDIKANEASLLYRGLMDFWEICSGNSIDKRSL 430 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 L L P+L + E L L + ++ SG+++ ++ + + Sbjct: 431 LKFLRNPLLHSNIRSNSESLSILEKLIDTSGVQYEESGREKDSFQISNGLKRIRLSSILS 490 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 + + L DE S L+ + + + G ++L Sbjct: 491 QETAWTKYKIAPIF---LESDEHSFLLTNFWETVLKAKNDILSFSEGKTIRWTP-DYLKT 546 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 R L F + E L + ++++ + +SLL+ Q DQ Sbjct: 547 VRASLEELFEFPGKYEQEGKLFQNWSESLLEWEGIRLHNKEEGISLLKFVTEQTFDQIPY 606 Query: 651 SQR-FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 + +L G V I L PMR +PFK + +LG+ +G +P +L + D S R Sbjct: 607 RKGAYLTGGVTISLLQPMRPLPFKHIYILGLGEGKFPGSNDRSQLNLRKDFREEWDISHR 666 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 + L E + SA++ L +SY+G+++Q++ P + E+++ + +A+ Sbjct: 667 EIQESLLWETIHSAKESLTLSYVGKNLQEDKTFEPCSHLFEIMESLQ------IKKAVEL 720 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP 829 +K T + Y G + E + L Sbjct: 721 PLHSYSIKYKHTSEELKQGLVS--YDFGRVWVNGNRNDYTILDRFQNPKELAKTSSTPLS 778 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQI---NQQLL- 885 + ++ L +F + P+ + + +L + E+S + E F L+ ++ I L+ Sbjct: 779 SGIDVKELSQFLSDPLDTYLKRKLGMYLEEEESSDYEKEIFDLDAIAETSILRKVHALMV 838 Query: 886 -----------NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC 934 + + R++ P FG+I + + ++ + Sbjct: 839 PDLVSKESWSWDREKILQVLSPILEMERSSAKFPRSVFGKIQETDLVRYLVTTSENLFEW 898 Query: 935 RQ------------------------PGQSMEIDLACNGVQITG-WLPQVQPDGLLRWRP 969 + +++ L I G W ++ DG L W Sbjct: 899 KPIFQGGTYYPYLSLGDTGLSDSICKKMPELKVPLESGRFSIKGEWEHVIEKDGNLYWLF 958 Query: 970 SLLSVAQGMQLWLEHLVYCASGGNG-ESRLFLRKD----GEWRFPPLAAEQAL------- 1017 S + + +L + Y + + + + F P +E++ Sbjct: 959 SKSLEEKPSEDYLGYKDYWRTMSFPFLTGVAFASSNENFKVYSFKPRPSEESKKKNTLTL 1018 Query: 1018 -----------HYLSQLIEGYREGMSAPLLVLPESGGA--WLKTCYDAQNDAMLDDDSTL 1064 YL++++ Y + + P+ P +LK + LDD Sbjct: 1019 EYRIGSPSIGIEYLAKILMEYLK--TEPV-FFPRKAFLNYYLKNIQGDSKNKTLDDVFDD 1075 Query: 1065 QKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQ 1121 + A +FL+ E N + G +L+ + +++ ++ ++ F P + + Sbjct: 1076 ESAWIRFLKE-ELNEVKSGLS---SLVKLYPKTPNLILQSRIQWAKNFYKPFLDWRK 1128 >UniRef50_A7VTM6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTM6_9CLOT Length = 740 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 90/713 (12%), Positives = 181/713 (25%), Gaps = 125/713 (17%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA----------WQA--------PL 168 L ++ A + DQ L LA T L E W A L Sbjct: 40 LINRIAYIIDQSLAKPWQILAITFTNKAAGELKERLTAMLGDTGGDVWAATFHSTCARIL 99 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA-----LPPVY 223 + + + + + + ++ + + + IS L P Sbjct: 100 RRDGDRIGYSSHFTVYDTDDSKRLVKDCQKALNIDDKMISHKSILSEISHAKDSMLSPAD 159 Query: 224 LQALQ----ALGKHIEIHLLFTNPCRYYWGDIKD-------------PAYLAKLLTRQRR 266 QA L K ++ L+ R D P L R R Sbjct: 160 YQAAAGSDFRLAKIGAVYELYQKRLREADAMDFDDLLGNTVELFRQCPDVLEYYQNRFRY 219 Query: 267 HSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDA 325 ++ + E L S VG+ + + G + + Sbjct: 220 IMVDEYQDTNQVQYEFVRLLAEKSKNLCVVGDDDQSIYKFRGATIEN----------IMS 269 Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSP 382 F P+ + ++ + +N A + + +P I H + Sbjct: 270 FEKSYPNAKVIRLEQNYRSTKNILNAANAVISNNEERKGKTLWTENPEGDKIQIHTSSNE 329 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 Q E + +L + D V+ + +PY I Sbjct: 330 QDEAGFVATTILEQVA--KGRKYSDFAVLYRMNSQ-----SNILEKVFVKSGIPYRIIGG 382 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + I+ LS+ ++ + +++ P + I ++ + + G Sbjct: 383 HRFYERREIRDMIAYLSVINNPSDEIRLRRIVNQP----KRSIGDKTIATASEIAGALG- 437 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 + L R + + Sbjct: 438 -------------------ESLLEVLGR--------------------ADEFDSLRRASV 458 Query: 563 HLASLLMQLNIWRRGLAQER-PLEEWLPVCRD--MLNAFFLPDAETEAAMTLIEQQWQAI 619 L + + E L E + + + E + + Sbjct: 459 KLKAFYDMMQELIDANDDESVSLHELYELILEKTGYIEALRGEKEEAETRIENINELASN 518 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 + + +A LS +E++ D + A V + T+ + + F VV L G Sbjct: 519 LLKFQEENGEEAT-LSAFLEEVSLMTDIDNYD--ETADTVVMMTMHSAKGLEFPVVFLPG 575 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 +G++P A D + ++R L A+ A++ LY+ + Sbjct: 576 FEEGIFPGLQAIY------------DPNEIQEERRLCYVAITRAKESLYLLNADSRMLFG 623 Query: 740 SE--RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 S PS E+ + + + L Sbjct: 624 STSRNRPSRFSLEIPLDLINKTREQDWRKPDLGTKMPVAETELRRKSATAAMH 676 >UniRef50_C4V2E0 ATP-dependent DNA helicase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2E0_9FIRM Length = 746 Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 77/630 (12%), Positives = 173/630 (27%), Gaps = 89/630 (14%) Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 + E G + H ++ R ++ + + I AL LQ AL Sbjct: 129 IDEKHTAPGAVQAHISDAKNRLLDVAAFTAQATDFFAEQ--VAKIYALYQSKLQENNALD 186 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 + L K+ K + + ++ + L Sbjct: 187 FDDLLMLTVELLT-------KNEELRMKYQKKFQYILVDEYQDTNGAQYAITKLLAAEHR 239 Query: 292 -EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV 350 VG+ + +G G D +++ F P+ + ++ + +N Sbjct: 240 NICVVGDADQSIYGWRGADMRNIMN----------FEQDYPEATVILLEQNYRSTKNILA 289 Query: 351 AGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 A + E + +P IT + + + E + + + + D Sbjct: 290 AANAVIENNLTRKKKELWTDNPTGDRITIYEGATEKNEASYIVREVERLHTMFH-VKYGD 348 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 I V+ A +PYA+ ++ I+ L + + + Sbjct: 349 IAVLYRTNAQSRNI-----EEAFYATGVPYAMVGSVRFYDRREIKDIIAYLRVIYNPRDT 403 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 +L +++VP R + + + + E I Sbjct: 404 LSLLRIINVP----RRGLGPTSIARMMETAEEYRISLF---------------------- 437 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 L A++ L + + L RP+ E Sbjct: 438 --------------EVITDAQLLSMIPKLSAKVKVALEEFAAMVFTFMGQLGT-RPIHEI 482 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ---YGDAVPLSLLRDELAQR 644 + + + E + + + I+ L+ ++A Sbjct: 483 VEDVIETSGYAAALEEEKKEDNRDRLENLREFISVAKNFDDGAEEGENGLADFLAQIALI 542 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 D ++ Q G V + T + + F V + GM +G++P Sbjct: 543 SDVDQTEQ--SDGTVTLMTFHAAKGLEFPAVFMAGMEEGLFPHSRT------------LL 588 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLP 762 D + +++R + A+++LY++Y + PS + E+ + + + Sbjct: 589 DDTEIEEERRTCYVGITRAERRLYLTYARQRTIYGRTEMSRPSRFLAEIPEELVEHKEAD 648 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQ 792 + T + P Sbjct: 649 FFGGADLRAPSNIWSERSTRTQRKRYIAPP 678 >UniRef50_C0VSX9 ATP-dependent DNA helicase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VSX9_9CORY Length = 735 Score = 246 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 68/537 (12%), Positives = 148/537 (27%), Gaps = 85/537 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG--EQDVGNPLLASWGKLGRDYI 311 P A R R ++ + E L DG VG+ + + G Sbjct: 201 PDVTAYYRRRFRHVLVDEYQDTNHAQYEFISALVGKDGTGLCVVGDADQSIYAFRGATIR 260 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLD 368 + F P+ ++ + +N A A ++ E N Sbjct: 261 N----------IREFERDFPNATTILLEQNYRSTQNILSAANAVISHNEHRGKKNLWTDQ 310 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 I +V + E + + +D L ++ VM + V Sbjct: 311 GAGPKIIGYVADREEDEARFIASTI-----DDRNLPYNEVAVMYRTNAA-----SRVIED 360 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 +PY + + I+ L + D+ + +++ P R I ++ Sbjct: 361 VFIRTGIPYRVVGGTRFYERKEVRDIIAYLRVVDNPDDEVSLRRIVNTP----RRGIGDK 416 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L ++ +A ++++ Sbjct: 417 ALAFVT---------------------------------------AFASRENISLYEAMR 437 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 DE L A +A + + R G + L + + + A Sbjct: 438 HVDEVDYLGARGRNAIAKFVAMMEELRAGTQEVGDLINLITDVSGYRDELEKSKDPRDEA 497 Query: 609 MTLIEQQWQAIIAEGLGAQY--GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + A + + + + ++ D ++I G V + TL Sbjct: 498 RLDNLNELVAYARDFAQQARANDEDDSVQAFLERVSLVADADQIP-DAGQGVVTLMTLHT 556 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F V L G +G +P + G+ +++R L + A+++ Sbjct: 557 AKGLEFPYVFLPGWEEGQFPHMRS------------LGNTEEIEEERRLAYVGITRARKQ 604 Query: 727 LYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 L+IS I + + S + ++ + + + S Sbjct: 605 LFISRALLRIAWGNPQTNPESRFLGDIPSSLIEWEREEPAYGVGGGYSSYGGNDGWI 661 >UniRef50_C6A858 Superfamily I DNA and RNA helicase n=18 Tax=Bifidobacterium RepID=C6A858_BIFLB Length = 939 Score = 246 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 65/537 (12%), Positives = 146/537 (27%), Gaps = 97/537 (18%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE------------------QD 294 P + R ++ + +L D Sbjct: 260 QPHVAEYYRHKFRYILVDEYQDTNHAQYVLVRELAGVDAHEPSDPMATEAGKSGPAWVTV 319 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVA 351 VG+ + + G D + F PD ++ + + + A A Sbjct: 320 VGDSDQSIYAFRGADIRN----------IQDFEKDFPDARTIMLEQNYRSTQTILDAANA 369 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + + I + + Q E + ++L + E+ L D+ +M Sbjct: 370 VIAHNSARKPKKLWTALGEGDKIIGYAADTAQLEAHWIAQQILHL-HEEKGLPYSDMAIM 428 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 ++PY + ++ I+ L + ++ Sbjct: 429 YRANAQ-----SRSLEEGLIQAHIPYQLIGGTKFYERREVKDAIAYLQAIVNPADDINMR 483 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +L+VP + G+ +L L A + Sbjct: 484 RILNVP-------------------------KRGLGTRAESQLTLFANEHN--------- 509 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP-LEEWLPV 590 Q W ++ ++ G+ A + + + R + E + Sbjct: 510 ---------QTFWWAIEQLEDIEGMSARTANAVRAFRELMTSLRTFAGEHDSKPSEIVAQ 560 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA-VPLSLLRDELAQRLDQER 649 + + L + + + + + L+ + A D ++ Sbjct: 561 VLEQSHMLELLRKSEDPQDESRVENLSQLQSVAAEFEQNTPDTTLAGFLETTALVADSDQ 620 Query: 650 IS-QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 + + +G V + TL + + + +V L GM G +P A D Sbjct: 621 LPGEGHDSGKVTLMTLHTAKGLEYPIVFLTGMEQGTFPHSRAMENMD------------E 668 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPG 763 ++R L + A+++LY++ Q E PS + E+ D + Sbjct: 669 LSEERRLAYVGITRAKRRLYLTRAAVRAQWGRQSEMMPSQFLDEIPDSLIDWKRREA 725 >UniRef50_A0Q2Q4 ATP-dependent DNA helicase PcrA, putative n=23 Tax=Clostridium RepID=A0Q2Q4_CLONN Length = 760 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 60/527 (11%), Positives = 148/527 (28%), Gaps = 79/527 (14%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIY 312 P L + + ++ + + L + VG+ + G D Sbjct: 203 PEVLEFYQNKFKYIMVDEYQDTNKTQYQLVKMLAAAHRNIFVVGDDDQCIYQWRGADIKN 262 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV---NIEEFSRSDNKRPLDP 369 +L F P+ + ++ + N A ++ R + Sbjct: 263 ILD----------FEKDYPEAKVVKLEENYRSKANILNAANTVIKHNSQRKNKVLRTQNE 312 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 I + +S E + + + ++++ + +D ++ VF Sbjct: 313 NGEKIKIYRAYSDMDEGLFISNEIKRLIKK-ENRSYKDFAILYRTNAQ-----SRVFEDV 366 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 R +PY I ++ + L ++ + +++VP + I Sbjct: 367 FMKRDIPYRIIGGLKFYDRKEIKDITAYLKFINNLQDDISLKRIINVP----KRAIGAAT 422 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + ++ + Y E V Sbjct: 423 VSKIQDFA------------------------------------NYMDECMYSVLLDVEN 446 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 S + SL+ + ++ ++E L M + E + + Sbjct: 447 IPGLSKRSISSINKFTSLINGFTRTKDKVSVSNLIQEILESTGYMKELKDSNEIEDISRI 506 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 I++ A + + LS +++ D + + TL + Sbjct: 507 ENIKELVSAAVEF---ENTSEDKSLSAFLEKITLVSDVDNYD--EDTDTTVMMTLHSAKG 561 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F VV ++GM +G++P + F + ++ R L + A+++LY+ Sbjct: 562 LEFPVVFMVGMENGIFPGAQSLENF------------AEMEESRRLCYVGITRAKEQLYM 609 Query: 730 SYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 + S + E+ + + E+ + Sbjct: 610 TSASTRKVFGRSVAYSESDFINEISPNLKEMVREGRTESAVKSSTVR 656 >UniRef50_D1CD72 UvrD/REP helicase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD72_THET1 Length = 779 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 80/625 (12%), Positives = 167/625 (26%), Gaps = 67/625 (10%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 Q L K + + R+ Q I + +SA P S+ + Sbjct: 124 DDDDQIRLIKQALNEIGLDEKQYAPRS--IQARISSAKSALLDPEDYSSQGVSSYFDEIA 181 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 + Q L + + + P L + R + ++ + Sbjct: 182 ARVYRRYQQLLEINQAVDFDDLLMKVVLLWKSYPDILQQYRDRWQYVLVDEYQDTNRAQY 241 Query: 281 ENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQ 339 L VG+ + D +L+ F P+ + ++ Sbjct: 242 MLINLLTQEHRNIFVVGDEDQGIYSWRAADIRNILN----------FERDYPEAKVILLE 291 Query: 340 SDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 + + A ++ R + + + Q E + + + Sbjct: 292 QNYRSYQEILDVASHIISSNRLRRPKKLWTNKSGGALVRVREAYDEQDEASYIAREISRL 351 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 T D VM P A + +PY I ++ ++ Sbjct: 352 TSLGE-YTYSDFAVMYRTNSQSRPV-----EEAFSRYRIPYQIIGGTRFYERREVKDVLA 405 Query: 457 LLSLPDSRFVSEDVLA-LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 L L + + + + + P T + L + Sbjct: 406 YLRLIHNPHDAASLRRIIENTPSGRGIGKGTMKTLE-----------------------D 442 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 L + + + + LG G + L + E + L L+ +L R Sbjct: 443 LASRAHISLWDAIE-IALGIKSLEEVGAFLPNLEIPKLQSKAKESLKQLVGLIYELREQR 501 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 L ++ L + +F AE + + +I + +A L Sbjct: 502 DILTLPHLIDTLL--IKSGYASFLSSGAEEDLERLENARDLISIAQDYAAIDTSEA--LV 557 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 E+ L + + + V + TL + + +KVV ++G +G+ P + Sbjct: 558 EFLQEV--ALQSDVDTMQNNGNQVTLITLHAAKGLEYKVVFIIGFEEGLLPHARSMD--- 612 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELID 753 S +++ L + A +KLYISY PS + + Sbjct: 613 ---------RESDIEEECRLAYVGVTRAMEKLYISYAFHRNVFGATQTNVPSRFLANIPP 663 Query: 754 YIGQSHYLPGDEALNCDESEARVKA 778 + + Sbjct: 664 DLLDGSLPSLGRRGPGRLTSTTSPR 688 >UniRef50_Q1PY53 Strongly similar to ATP-dependent DNA helicase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY53_9BACT Length = 729 Score = 245 bits (624), Expect = 8e-63, Method: Composition-based stats. Identities = 72/647 (11%), Positives = 172/647 (26%), Gaps = 104/647 (16%) Query: 166 APLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGIS-------- 217 L K + + + + R + R I IS Sbjct: 90 RILRKDIELLGYSKDFTIYDTVDQLNRIKSIMADLEIDTAHWKPRSIISSISNAKNKLID 149 Query: 218 ------ALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDI-------KDPAYLAKLLTRQ 264 +Y Q + + K + L N + I P L+ R Sbjct: 150 HERFAATASDIYHQMVAKIYKKYDTMLKSGNALDFDDLLIKTVELLKIRPDVLSSYQERF 209 Query: 265 RRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQEL 323 + ++ + F + L G+P + +G G D ++ Sbjct: 210 KYILIDEYQDTNFVQYAISRLLAQKYKNICVTGDPDQSIYGWRGADLRNIMD-------- 261 Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAG---VNIEEFSRSDNKRPLDPLDSSITFHVCH 380 F PD + ++ + +N +A + ++ + + I C Sbjct: 262 --FEKDYPDARVVLLEQNYRSTKNILLAASSVIQKNKYRKQKEIWTENEHGEKIKTIHCE 319 Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 + E E + + A+ + +I + A + +PY I Sbjct: 320 NEHSEAEEIAKTIRAL--RGNGIKYTEIALFYRTNAQ-----SRTLEIALRNAGIPYVIV 372 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 ++ ++ + L + + ++ P I ++ +++W Sbjct: 373 GGVEFYRRKEIKDILAYIRLCVNPCDDSALERAINTPA----RGIGTTTVKKIKEWAESR 428 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 + ++ D + + Sbjct: 429 ---------------------------------------ESTLFNAIGIVDAIHEVTGKS 449 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 + + + R E +E+ L D E + ++ Sbjct: 450 AAAIKRFYELIMVLRH--MPETSVEKTLKSIIDKTGYIHFLRKSEEKESEDRIANVEELV 507 Query: 621 AEGLGAQYGDAV-PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 L +E+A D + + LA V + TL + + F VV + G Sbjct: 508 NAAHEYDANHTDGSLQGFLEEVALISDLDTV--EDLAEAVTLMTLHTAKGLEFPVVFISG 565 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 M +G+ P + + + + ++ + L + A ++L+++Y R ++ Sbjct: 566 MEEGLLPHSESRISEEEIEEERR------------LCYVGITRAMKRLFLTYTKRRMRYG 613 Query: 740 S--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 S + E+ + + ++ + Sbjct: 614 QLIPCVASRFLDEIHADCMDRLDKTENHFSYEYQGKSNSWENDAVEA 660 >UniRef50_C5NYN7 ATP-dependent helicase PcrA n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYN7_9BACL Length = 727 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 51/546 (9%), Positives = 168/546 (30%), Gaps = 81/546 (14%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIY 312 P LA + + ++ + L VG+ + + G Sbjct: 202 PEVLAIYQNQFQYIHVDEYQDTNVIQYRLIKMLSAVHKNVCVVGDDDQSIYSWRGACSDN 261 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDP 369 +++ F D L + + A + + + + Sbjct: 262 IIN----------FEKDFDDVELVFLDQNYRSNSTILDAANAVIKNNTDRKEKELWSENK 311 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 I+ + + + E + + ++L + + + +DI ++ + ++ ++ Sbjct: 312 GGGKISVYAASNDKDETDDIAKKILEL--KKEGIDYKDIAILYR-----ANYLSRQMENS 364 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY + + ++ L++ +R + +++VP + + Sbjct: 365 CLSFGIPYKLIGSLKFLQRQEVRDLLAYLNVIVNRADEFSLRRIINVP----KRGVGASS 420 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + + ++ + GI ++++ Sbjct: 421 MDKIDKYAEQYGI---------------------------------------SLFEALKN 441 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + G+ ++V ++ L + + ++E + + + Sbjct: 442 IEAI-GVSKKIVTNIKLLTNLIEKYSEVERYA--IDELIIGIYKDSGYETMLKESNDPYA 498 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + +++ + L D +++ V + T+ + Sbjct: 499 ESRIENISELVSSAKQFSSMN----DSLIDFISEMSLTSDSDDENQEDAVVLSTVHASKG 554 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + +KVV ++G+ + ++P ++++ +++R L A+ A+++L++ Sbjct: 555 LEYKVVFIMGLEENLFPSIRDAES--------SADEKNKMEEERRLAYVAITRAKERLFM 606 Query: 730 SYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 SY R +Q S + E+ + + G + D + + ++ L ++ Sbjct: 607 SYANRRMQFGSIKMNKRSRFLDEVPNKLMHFESSFGGSFESTDSNIEQANKFISKLSPKI 666 Query: 788 PFDPQN 793 + Sbjct: 667 KISEKP 672 >UniRef50_Q68WT1 DNA helicase II n=17 Tax=Rickettsieae RepID=UVRD_RICTY Length = 658 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 80/599 (13%), Positives = 176/599 (29%), Gaps = 83/599 (13%) Query: 163 AWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPV 222 Q L K +V+ + ++ L I + P L + + + + Sbjct: 121 DDQLTLVKDIVKLKKDIDTKKYTPK-LIHIIISRWKDQGLLPSKLSASDTNLPLQRVAKL 179 Query: 223 YLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSEN 282 + Q + IK+P L + R ++ + Sbjct: 180 IYEEYQKNLLISNVLDFGDLLLYNNELFIKNPEILKYYQEKYRYILIDEYQDTNIAQYLW 239 Query: 283 AGQLF-NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD 341 A L VG+ + +G G + +L F + ++ + Sbjct: 240 ARMLASLYRNICCVGDDDQSIYGWRGAEVGNILR----------FEKDFAGATIIKLEQN 289 Query: 342 ILELENRAVAG---VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 A +N + S I C S + E + + ++ Sbjct: 290 YRSTLPILAAASNVINNNKNRHSKTLWTDSASGEKIKIISCLSDKEEARYIACEIDKLVR 349 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 E+ +I ++V + F F A + +PY I + ++ + Sbjct: 350 EER-YHAGNIAILVR-----AGFQTRSFEEAFINSAMPYKIIGGLRFYERMEIRDVLAYI 403 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + ++ + + +++VP + I L + Sbjct: 404 RISLNQNDNLALERIINVP----KRAIGAASLNKI------------------------- 434 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 YA+E + ++ E+ A+ L LL +++ W Sbjct: 435 --------------RSYALERNISNFVAIKEILETGIFKAKSYESLKDLLTKIDNWYEKF 480 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 + P+ + D + E + ++ + Sbjct: 481 ITDTPI-NVVKTILDDSGYLSMLQEEKTEEAFGRIENINEMLRAIAEF-----NDIHDFI 534 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 + + ++ E + + G V I TL + + F VV L G +GV+P Q + Sbjct: 535 EHSSLVMENEVLETNY-GGSVTIMTLHAAKGLEFDVVFLPGWEEGVFPSQR------SLD 587 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYI 755 + ++G +++R + + A++ LYI++ PS + E+ D I Sbjct: 588 EDGEKG----LEEERRIAYVGITRAKKDLYITHAESRKIFYEIVHSCPSRFINEIPDEI 642 >UniRef50_A4XKK0 ATP-dependent DNA helicase PcrA n=2 Tax=Clostridia RepID=A4XKK0_CALS8 Length = 714 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 61/517 (11%), Positives = 153/517 (29%), Gaps = 81/517 (15%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 +P L K + + ++ + L VG+ + + G D Sbjct: 200 NPDILEKYQHKFKYILVDEYQDTNHAQFYLIYLLSQKHRNICVVGDDDQSIYSFRGADVR 259 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLD 368 +L F +V PD + ++ + + A + + + Sbjct: 260 NILE----------FENVFPDAKVIKLEKNYRSTKTILSAANEVIKNNRNRKPKRLWTDN 309 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 I + E + + +++ + P +I ++ F + Sbjct: 310 NEGEKIYLYPAFDEVDEANFVSMSIKNLIQ--GGIKPSEIGILYRTNAQSLN-----FEN 362 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A + +PY + ++ I+ L L + + + +++VP + I Sbjct: 363 ALSSHSIPYKVVGSLRFYERKEIKDIIAYLRLITNPDDNLSLFRVINVP----KRGIGPS 418 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + ++ +E GI + E Sbjct: 419 TVEKIKVLSDEYGISAYRLLKERGDFEFDR------------------------------ 448 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 L ++ L R + + + E + + D + Sbjct: 449 ----------RTYAKLYDFILLLESMRTEA-ESKSVVEVIELVLDKTKYMESLLSSKNEE 497 Query: 609 MTLIEQQWQAIIAEGL-GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + + +I+ + + L + + +++ + V + T+ Sbjct: 498 DFQRAKNIEQLISAAAMFEEENEDKSLQNFLNSITLSFEEDDGQKE---DKVMLMTVHAA 554 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F+VV L G+ +G++P L+ + + ++ +++R L A+ A++ L Sbjct: 555 KGLEFEVVFLTGLEEGLFP---------LLRSEGEIELQNELEEERRLCYVAITRAKRFL 605 Query: 728 YISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLP 762 ++Y R S + E+ Q Y P Sbjct: 606 VLTYANNRRVFGRFSSRQKSSFIDEIPIKYIQQIYTP 642 >UniRef50_C8WP33 UvrD/REP helicase n=3 Tax=Coriobacteriaceae RepID=C8WP33_EGGLE Length = 813 Score = 244 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 64/548 (11%), Positives = 150/548 (27%), Gaps = 55/548 (10%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIY 312 + R R ++ + G L VG+ + + G D Sbjct: 203 EDVRSAYQQRFRYIMVDEYQDTNHAQYSITGLLAEGHKNIMVVGDDDQSIYSWRGADLRN 262 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE---EFSRSDNKRPLDP 369 +L F P ++ + + N A + + ++ Sbjct: 263 ILE----------FEQDYPTAHTVKLEQNYRSVGNVLAAANAVIANNQHRKAKKLFTSAE 312 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 I ++ + E + + + L+ + V + Sbjct: 313 DGDKIQVYMAADERDEGRWIAGEIEK--QRAAGLSYNQVAVFYRTNAQ-----SRMLEDM 365 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY I + ++ L+L + +++VP R I + Sbjct: 366 LLRAGVPYRIVGGTRFFDRAEIRDVMAYLTLVVNPADDIAAKRVINVP----RRGIGKTT 421 Query: 490 LRYLRQWVNESGIRWGIDDDNV---RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + + Q+ E G+ + + EL A GL Y + + Sbjct: 422 IERIEQFAREMGMTFMEGAELAIVDPELRASARQAIGEFVGLVNEARTYGGDLRKVIETI 481 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 + L AE + + + + + E + A Sbjct: 482 IDKSGLIGALQAENTDEARGRIENIQEFLGVVDEFTETHEDEDALYEAPTAEPADAPALA 541 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVP-----------LSLLRDELAQRLDQERISQRFL 655 + + + A + L+ + + R D + ++ Sbjct: 542 PVPSSADALAGSFYAFAGANELAAPAEESPVRVLRGDSLADFIEWVRLRTDLDTVA--ED 599 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 V + T+ + + F V + GM + ++P + GD + +++R L Sbjct: 600 GHAVTMMTVHSSKGLEFDCVFVAGMEETLFPHMNSV------------GDAAGIEEERRL 647 Query: 716 FLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 A+ A++KL+++ S +QE+ + Q+ L + Sbjct: 648 AYVAITRARKKLFLTCAYARQIFGQTSSNPISRFIQEIPSELRQTTGLGSAGFSGTGWEK 707 Query: 774 ARVKAHLT 781 + + Sbjct: 708 RGSRKGIA 715 >UniRef50_C2CV85 Possible ATP-dependent DNA helicase n=2 Tax=Bifidobacteriaceae RepID=C2CV85_GARVA Length = 964 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 91/775 (11%), Positives = 199/775 (25%), Gaps = 125/775 (16%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN-IDFPLP 65 S + VL + + R P + + + A ++ L+ G +AN + Sbjct: 127 SGKTRVLTRRIA-WILANRKAWP-SQILAITFTNKAAAEMRERLASLIGNSANSMWVSTF 184 Query: 66 ASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD-KRKL 124 S + I +S F+ + + D L + + + K Sbjct: 185 HSACVKILRAHGDSIGLKSGFS--------------IYDSSDCERLVKIIASELNIDIKK 230 Query: 125 FQ---LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 F L SK +D F LV W+ G Sbjct: 231 FTPKLLLSKISD-FKNNLVT-------WQENLKNYAPDYKPG------------ASVSGA 270 Query: 182 PRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 ++ A + + + + V + L L+ + + + + Sbjct: 271 SSFNAAGNADALYAAVYAEYQNRLSVSNAVDFDDLIMLTVKLLRQNPQVSAYYKRKFRYI 330 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLL 300 Y L + L +D S + VG+ Sbjct: 331 LV-DEYQDTNHAQYVLIRELAGVDDAGVDDYSTDSTVSSVSPDSTQLPQSSITVVGDSDQ 389 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEE 357 + + G D + F P ++ + + + A A ++ Sbjct: 390 SIYAFRGADIRN----------IQDFEQDFPSATTIMLEQNYRSTQTILDAANAVISNNA 439 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + S I +V + Q E + + + + + DI +M Sbjct: 440 NRKPKKLWTSLGKGSPIVGYVADNAQGEASWVAQEIARL-AGEDGVNYSDIAIMYRANSQ 498 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 A LPY + ++ ++ L + ++ +L+VP Sbjct: 499 -----SRSLEDALIKSGLPYQLVGGTKFYERREVKDALAYLQSIANPDDDVNMRRILNVP 553 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + + YA Sbjct: 554 -------------------------------------------KRGLGARAESQITSYAK 570 Query: 538 ESAQGEWQSVLPYDESS---GLIAELVGHLASLLMQLNIWRRGLAQERP-LEEWLPVCRD 593 E++ W ++ D+ + G+ + L S + + + + + Sbjct: 571 ENSISFWSALSQIDKIAEQIGISSRTFNALKSFRDLMTSLIDFMKANDSKPSKVVENVLN 630 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA-VPLSLLRDELAQRLDQERIS- 651 + + + + ++ + A D +++ Sbjct: 631 ESGLLQDLRESKDPQDEFRVDNLSQLQSVAAEYEQNTPDANVAGFLETTALVADSDQLPD 690 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 Q G V + TL + + + VV L GM G +P + + Sbjct: 691 QGEDTGKVTLMTLHTAKGLEYPVVFLTGMEQGTFPHSRCVDN------------QKELCE 738 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFP--SVLVQELIDYIGQSHYLPGD 764 +R L + A++ LY+++ Q S + E+ + D Sbjct: 739 ERRLAYVGITRAKKILYVTWAAERSQWGKSAEMIQSQFLDEIPADLISWKRKEAD 793 >UniRef50_A0AL19 ATP-dependent helicase/deoxyribonuclease subunit B n=20 Tax=Listeria RepID=ADDB_LISW6 Length = 1157 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 105/1077 (9%), Positives = 272/1077 (25%), Gaps = 164/1077 (15%) Query: 2 LRVYHS----NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTL-SQKFGI 56 L++ + L + +++ + +V Q L + Sbjct: 3 LQIIAGKSGTGKTTHLMDEVGKKIKKTSK-----TYIFIVPDQMTFQMETSFLNKESLSG 57 Query: 57 AANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLT 116 + W + +K + + ++R Sbjct: 58 MLGTQIFSFSRLAWKILQETGG-------LSKTFL-----------SQTGIEMVIRKAAL 99 Query: 117 DDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYT 176 D DK K+F ++ + + L + + + + A L + + + Sbjct: 100 DQKDKLKIFSKATSRKGFYSELA-------------KLFKEMKQEEVSVADLENSAINMS 146 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 + + +YQ++ E L L+ L I Sbjct: 147 KSVTNKIHDISLIYQKYEELLAGKFLENE-------------------DYLRLLADKIIE 187 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDREL-PLFRDSENAGQLFNSDGEQDV 295 I D ++ + N ++ E Sbjct: 188 SDYLNQT-----EIIIDGFTSFSKQELTVIEKLMEKCDKVTVSLTLNVPEIQKGLEEY-- 240 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 + K + + L ++ ++ D +++ + ++ A Sbjct: 241 ------NMFKQSTEAYFALLEMAKLNKISVESDK------LFLENKRAKSDSLAFLADVW 288 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 + + H ++ + E+E + + + +D+ ++ +I Sbjct: 289 GNNKF----VTFEEKPQDLAIHQANNRRAEIEGIAREIRQL--TLKGYRYQDMAILTRNI 342 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 Y + V +P I +RA HP +E S + + E + + Sbjct: 343 SDYDVLCETVME----SFDIPIFIDKKRAMAKHPFIEFIRSSIDAILFNWKYEPIFQAVK 398 Query: 476 VPVLAARFDIT---EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 + T L +V E+GI+ + + + Sbjct: 399 TEFFFDVSENTSIMRRKADILENYVLENGIQNKWKWEKEGDWIYRKIRGLSTNLLPQTDE 458 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 ++ M L + + LE W Sbjct: 459 ELETQAIINEMRNLIVEPLSILENNLAKARTGTEFAMALYHFLEQVKAVEHLESWRQTAE 518 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 + E ++ E + +++ ++ + +A LD S Sbjct: 519 E------NGYLELAREHEQAWSSVSELLDEFVEVLGEESLDINSFAEIVATGLDALEFSL 572 Query: 653 RFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK---------PK 702 + + + + + + KV+ +GMNDG+ P + G + K Sbjct: 573 LPPSLDQIVLSDMENAKLLDMKVIFAIGMNDGIMPLRQKDKGILSDQDRDSLRAENSNLK 632 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI---DYIGQSH 759 ++ ++ L + + KL++SY + S ++++ + + Sbjct: 633 PSAKNNIGEEDLLAYKIISLPSDKLFLSYPAADE-EGKVLSESNYLRKIKGQFKKLNEEV 691 Query: 760 YLPGDEALNCDESEARVK----------AHLTCLHTRMPFDPQNYQPGE-------RQSY 802 YL L+ +E + ++ + L P + Sbjct: 692 YLTDPSLLSDEEQSSYIRSKQATLGLLTSQLQMYKRGYPLSNVWWDAYNGYFEDTKESKV 751 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETVP--LETLQRFWAHPVRAFFQMRLQVNFRTE 860 A++ L + K + E + + +++F++ + F Q L++ R Sbjct: 752 AKQVLSSLYYENKTKALHETTAKNLFGENIHASVSRMEKFFSCEFQHFAQYGLKLEERAH 811 Query: 861 DSEIP-DTEPFILEGLS------------RYQINQQLLNAL--VEQDDAERLFRRFRAAG 905 D + + ++ + + + Sbjct: 812 FKLQAVDMGEIFHGAMEWISAELKRNNQDWGNLTEEECRQMAKLAMTFLAPKIQHEILLS 871 Query: 906 DLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG--------------VQ 951 + + L ++ + +E+D G + Sbjct: 872 SKRMEYIQYKLLQIITRATTVLNEQAKSSAFRPIGLEVDFGLKGDIPSLKIPLKSESELL 931 Query: 952 ITGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGE 1005 + G + ++ D R + E A + + + Sbjct: 932 LQGRIDRIDVAEQDDRTFLRIIDYKSSSHDLALTEVYYGLALQMLTYLDIVVTNAQK 988 >UniRef50_A6TVN9 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Alkaliphilus RepID=ADDB_ALKMQ Length = 1149 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 122/1062 (11%), Positives = 290/1062 (27%), Gaps = 157/1062 (14%) Query: 18 EFIVERERLDDPFEPEMILVQSTGMAQWLQMTL-SQKFGIAANIDFPLPASFIWDMFVRV 76 ++++ ++ +LV Q + + Q+ + +F V Sbjct: 19 LEEIKQKLQEEEDNKLFLLVPEQFTLQAERDLIRKQELTGMMRAEVLSFTRLAHRVFSEV 78 Query: 77 LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFD 136 + E +LR + + ++Q +K Sbjct: 79 GGLTRV------------------PINELGKNMILRKIADESLKELSIYQSIAKQDGFIT 120 Query: 137 QYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKAL--VEYTHQLGQPRWHRANLYQRFI 194 + + + + + + L L +E L + LYQRF Sbjct: 121 KLN----ELICEMKQHDITPT---------ELTMELNEIEEETILKRKLEDITLLYQRFN 167 Query: 195 ETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDP 254 L+ + L ++IE W D Sbjct: 168 NYLKGQYVDNEDH-------------------VNLLIENIERVEFLEGA--EIWIDGFQS 206 Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLL 314 + R + + +L + ++D+ + ++ L Sbjct: 207 -----FTPQIIRVIEKLAQKVANITITFTMELNAKEKDKDLFHITQKTY----------L 251 Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSI 374 +Q+ + + + N+ + ++ + +IE + + +++ Sbjct: 252 KVKTIAQKFNLDEE------VINLDIEERKVLPKEKEIAHIEREFNTYPYKQYADEIANL 305 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + E+E + +++ ++ + DI ++ +D YS ++ VF + Sbjct: 306 EIFAGSNLYSEMENVAAQIIHLV-RNRGYRWNDIALVSGGLDQYSMILKRVFEEY----H 360 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +PY I ++R+ ++P++E +S + + + EDV + L D+T++ + L Sbjct: 361 IPYFIDEKRSIMNNPMIELILSSIEILSRGYQYEDVFSFLKTGF----SDLTKDEVEQLE 416 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 +V + GIR + + Q + + + E + Sbjct: 417 NYVLQYGIRGKAYSEPFTKGFEKKQIQQKDKEEGEKQIDEEKKEKYNELRMRFIAPFAKF 476 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 + + L + + L E L +W+ R+ E T I Sbjct: 477 EKRIYRKKKIGEITKALFEFMKELNIEDKLNQWIEELRE------EKYFEYVNENTQIWN 530 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFK 673 + I + ++ L L ++ V + ++ +S K Sbjct: 531 KIMEIFDQLTEILADESATLKEYGRILEAGFLACKVGVIPSTIDQVLVGSIERSKSHDIK 590 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKR---------GDRSRRDDDRYLFLEALISAQ 724 + ++G+NDGV P G L ++ S +++++ A Sbjct: 591 ALFVVGVNDGVLPFGQEDGGILLDHERESLVKKGISIGTTLESSLLEEQFMIYSAFSKPT 650 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYI---------GQSHYLPGDEALNCDESEAR 775 + L++SY Q+ S+L+ + Sbjct: 651 EYLWVSYALAD-QEGKAMRQSILIDRFKKLFKNLRIKSDVVNDVDRQLHLITTPISTFKY 709 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSYAR--EWLPAASQAGKAHSEFVQPLPFTLPETVP 833 + ++ + + S E G H + + +++ Sbjct: 710 MTENIRQNVDDKAMADMWWDVYDWYSKEPTWEDRRKLMVKGLFHQNQITYIGENKAKSLY 769 Query: 834 -------LETLQRFWAHPVRAFFQMRLQVNFRTEDSEI-PDTEPFILEGLSRYQ------ 879 + L+RF P F L+ R E PD + + ++ Sbjct: 770 DNPIKSSVSRLERFANCPFSHFVTYGLRPKERKEYQLSNPDIGRLFHDSMEQFTKEMVNE 829 Query: 880 ----------INQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 N +L+ ++++ + F Y + M L D Sbjct: 830 EIQWKDLTKEKNDELVEKVIDEMVPD--FEHGIMLSTHRYQYLVTRLKRISKRAMWTLTD 887 Query: 930 RVIACRQPGQSMEIDLACNG--------------VQITGWLPQV----QPDGLLRWRPSL 971 V EI G + + G + +V + + Sbjct: 888 HVKKGEFVPMGHEIIFGLEGDVPPIIIELANGEKIYLEGRIDRVDLLNDEEDGNYVKIID 947 Query: 972 LSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAA 1013 + L + + + Sbjct: 948 YKSGSKEFSLSDVYYGLQIQLMVYLDAILSSEEKKHQVEIHP 989 >UniRef50_B8GFE8 UvrD/REP helicase n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GFE8_METPE Length = 1019 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 111/921 (12%), Positives = 235/921 (25%), Gaps = 142/921 (15%) Query: 162 QAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPP 221 W +LG I P L + + Sbjct: 109 LVWGLQHIDIFDFEHIKLGNNAADVIEAVIDGISAFRDELIAPDELDDYLTQKQSVQVEE 168 Query: 222 VYLQALQALGKHIEIHLLFTNPCRYY----WGDIK---------DPAYLAKLLTRQRRHS 268 + L LG ++++ + R + D+ DPA + +R R Sbjct: 169 AEQEYLLQLGDLLKVYRAYEQYKRERNLIDFDDMIHGAVTLFRSDPALRSSYRSRFRYIL 228 Query: 269 FEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVD 328 ++ + + + ++ VG+ + G + ++ + Sbjct: 229 VDEFQDTNYAQLQLIKEIAGE-NLCVVGDDDQTIYRFRGAYLTNI-------RDFKQWAA 280 Query: 329 VTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEV 388 + LL + + + A+ + R +T C + E E Sbjct: 281 THTETLLDQNYRNSGAVLSLALQVMAGAPGRREKALFTEKGDGEPVTVAACGNDAGEAEY 340 Query: 389 LHDRLLAMLEE---------DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 + + ++ D L RD V+ F +A +P Sbjct: 341 VAAEIEKLVGTPYHSRQDGGDRPLEYRDFTVLCRTKAD-----GKKFQAALQRHAIPCEY 395 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 PV+ ++ L + D+ ++ L R + Q +N Sbjct: 396 QANVDFMQLPVVRDMVAYLRIIDNPLMAAVPLN---------RVMKICSIPETVVQKINA 446 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 + I+ G D G ++++ AE Sbjct: 447 AAIKRGDD-------------------------------DDDGVYETMQDAASIVPDHAE 475 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 VG + +L + + + + + +T + L + I Sbjct: 476 PVGEVVRMLAPFIEQKERYTLPELVHAVMMQASGL---YRSALTDTADMVRLYLATFHEI 532 Query: 620 IAEGLGAQYGDAVP-LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + E +P L + L + Q+ V I T + F VV + Sbjct: 533 VLEFDRTTPEATIPGLLQYLELLGAFPVEVVREQKEAGDAVQILTAHKSKGKEFPVVFVA 592 Query: 679 GMNDGVYPRQLAPLGFDLMSQK---PKRGDRSR---RDDDRYLFLEALISAQQKLYISYI 732 + +P + +P F + + GD + ++R L A+ A+++LY++Y Sbjct: 593 DLAREKFPLRYSPKRFRVPGDLARGLRTGDDEKALFVQEERRLLYVAMTRAEERLYLTYA 652 Query: 733 GRSIQDNSERFPSVLVQEL-------------IDYIGQSHYLPGDEALNCDESEAR---- 775 + ER PS ++EL GD + S Sbjct: 653 KWYGDNKRERKPSPFLEELNFRENPLITVVEPPACAPALPVTAGDPVEDLRTSLQEEVVR 712 Query: 776 ---------VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 L L + Q +R ++ + + + P Sbjct: 713 AVSEMRISTAIQTLVTLEGVREYAEQGTDDFDRDAFLAKAGSRVGADTRITTLLDPPHQS 772 Query: 827 TLPE--TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL 884 +P L + P++ F +V + L + Sbjct: 773 LIPPNYRFSASALSTYQDCPLQFKFANLYRVPLPRQPQ------------LVFGSTLHSV 820 Query: 885 LNALVEQDDAERLFRR----FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ- 939 + L D + R P + L D +A + Sbjct: 821 IEHLTRNPDPSQSLRDQGLALLEEYWSPEPYESKTQESEAHDSASALLDTYLAWQAGNPN 880 Query: 940 -----SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLE-------HLVY 987 E + G I G++ +++ + + + L Sbjct: 881 TVIGVEKEFTFSFAGHSIHGFIDRLEQTPDGNYVVIDFKSGKKPDSLTKKAVGEHIQLNL 940 Query: 988 CASGGNGESRLFLRKDGEWRF 1008 + ++ K + Sbjct: 941 YSMAVQQMYQVLPEKAELFYL 961 >UniRef50_C7NAU4 UvrD/REP helicase n=5 Tax=Fusobacteriaceae RepID=C7NAU4_LEPBD Length = 735 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 74/640 (11%), Positives = 171/640 (26%), Gaps = 101/640 (15%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRV-------FI 213 Q + + + L R I L+ L + + Sbjct: 113 DVDDQKSIITKIKKEMGIKDNDNVQPGKLANR-ISKLKEQGIGIKELEREIDMRIPANRL 171 Query: 214 CGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRE 273 G + Y + L+A LL R D L ++ R + ++ + Sbjct: 172 FG--EIYQKYDEVLKANNAMDFSDLLLN--ARKLLDDTF---VLERIQERYKYIVVDEYQ 224 Query: 274 LPLFRDSE-NAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPD 332 E VG+ + + G + +L+ F + Sbjct: 225 DTNDIQYEMINMIAAKYRNICVVGDEDQSIYAFRGANINNILN----------FERDYKE 274 Query: 333 NLLHNIQSDILELENRAVAGVNIEEFSRS---DNKRPLDPLDSSITFHVCHSPQREVEVL 389 ++ + + + + ++S I + + E + + Sbjct: 275 AFTVKLERNYRSTKKILDTANELIKNNKSSKGKTLWTDGSDGEKIKIYNAMTVYDEADFI 334 Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 + ++ +D+ ++ V +PY I Sbjct: 335 VTEMKK--KKRDGADYKDMTILYRTNAQ-----SRVLEEKLLSANIPYKIYGGMQFFQRK 387 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 ++ ++ LSL +++ + + +++VP + + E+ L +++ NE I Sbjct: 388 EIKDILAYLSLLNNKNDNHNFYRIINVP----KRSVGEKTLEKIQEVANEKNISML---- 439 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 L Y + + A L Sbjct: 440 ------------------------------------EALHYIDEIPVRAATKLALKEFYN 463 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 + L + ++E + E + IE+ +II Sbjct: 464 LMQGIYSSLEEM-SIKEIFDEILIRTRYIDSIEDNKEDRVKNIEELLNSIIELEKQ---N 519 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 + L+ D ++ L V + T+ + + F V L GM DG++P Sbjct: 520 PNMSLNEYLDMIS--LSSSTDEMEDDENYVKLMTIHSSKGLEFDYVFLAGMEDGLFPSIS 577 Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE---RFPSV 746 + + ++ + A+ A+++L+ISY + R PS Sbjct: 578 FDSPEEELEEERRL------------CYVAITRAKKELFISYSSSRKIWGKDDNLRRPSR 625 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 + E+ + + + + Sbjct: 626 FIYEMKQDNLEYVGGKYASLKGQSSAPRSFTPKIENFNPF 665 >UniRef50_D1PL59 ATP-dependent DNA helicase n=4 Tax=Ruminococcaceae RepID=D1PL59_9FIRM Length = 871 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 81/606 (13%), Positives = 163/606 (26%), Gaps = 86/606 (14%) Query: 165 QAPLWKALVEYT-HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVY 223 Q L + + P + + + L S P IS + Y Sbjct: 174 QRVLKQIYKDKMIDDKFLPIKSAVSQISSYKDKLMSPEDVAAETPRDTKAALISKIYTTY 233 Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 L+ G L++ R D + R ++ + Sbjct: 234 AGRLKTAGAMDFDDLIYHTV-RLLQTD---AEAREYYQNKFRYVVVDEYQDTSIAQFHLV 289 Query: 284 GQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDI 342 L VG+ + + G +L+ F V ++ + Sbjct: 290 RLLAGGTNNVCVVGDDDQSIYKFRGATIENILN----------FEQVFTGAKTIRLEQNY 339 Query: 343 LELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 N A ++ + + + + S Q E + D + L Sbjct: 340 RSTSNILNAANSVIKNNTGRKGKTLWTEKGDGDKVHHYTAASEQDEASHIADVIGEHLR- 398 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 RD V+ +P + A +PY I + ++ S L+ Sbjct: 399 -EGAHLRDHAVLYRMNAQSNPI-----ETYFARAGIPYRIVGGQRFFDRKEVKDINSYLA 452 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + + + +++ P I + + + G+ Sbjct: 453 VIVNPRDDVRLRRIINEPA----RKIGASTVDKVGELAARQGVPM--------------- 493 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 V Y E + A L + +L + Sbjct: 494 ---------------------LQIIADVRQYPELTRAAASL-EKFYEMYRELCDLSVTIP 531 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 + E + E E + + Q ++ LS + Sbjct: 532 LDEFAGEVIKK-TGYEAMLKAQKEEGETRLENLGQLVSSVKTYADQNGEDAT--LSGFLE 588 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 E+A D + Q A V + T+ + + F V ++GM DG++P +A Sbjct: 589 EVALISDLDSYDQ--DADSVTMMTIHSAKGLEFPYVFVVGMEDGIFPGDMARYN------ 640 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQ 757 +++R L A+ A+++LY+S + R PS + E+ + + Sbjct: 641 ------EEDMEEERRLCYVAITRAKKELYLSTSRSRLIFGQTRRNLPSCFLSEIDPGLME 694 Query: 758 SHYLPG 763 P Sbjct: 695 ETQSPE 700 >UniRef50_D2RIV6 ATP-dependent DNA helicase PcrA n=6 Tax=Veillonellaceae RepID=D2RIV6_ACIFE Length = 750 Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 69/513 (13%), Positives = 157/513 (30%), Gaps = 80/513 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASWGKLGRDYIY 312 P K + ++ + A L + VG+ + +G G D Sbjct: 203 PEVREKYQNKFHYVLIDEYQDTNHVQYLLAKLLSAPENNLCAVGDIDQSIYGWRGADISN 262 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLDP 369 +L F P + ++ + + + A + R N + Sbjct: 263 ILD----------FEKDYPQARIFKLEQNYRSTQVILDAANEVIKHNAARRPKNLWTENG 312 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 I ++ + E E + ++ + + D+ ++ +F Sbjct: 313 NGQPIAYYQARDDREEAEFVVGQIRKL--QREGTKLGDMAILYRTNAQ-----SRMFEEN 365 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + +PY + ++ +S L + + + +++ P + I Sbjct: 366 LINNGVPYVMVGSLKFYDRKEVKDTLSYLRFLSNERDIQGLERIINEP----KRGIGAAT 421 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + +R + +SG+ T + R LLG A Q Sbjct: 422 VAKVRTLLEDSGM----------------TLPEVLQTVQARELLGRAFPKIQ-------- 457 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + ++ +L + L + +E+ L L A L ++ + Sbjct: 458 -------------AFSDMIQELARVKDTLPVKDLMEQVLEK-SGYLEALRLEGSDQSKSR 503 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVP-LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 ++ I E + L + +A D + V + TL + Sbjct: 504 LDNLNEFLRIADEFAKDPGEENNKTLEDFLNHVALVADIDDAKLT--QDSVTLMTLHSAK 561 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F VV + GM DG++P Q + D + ++ R L + A+++LY Sbjct: 562 GLEFPVVFIGGMEDGLFPSQRSLEDEDKLEEE------------RRLCYVGITRAKKRLY 609 Query: 729 ISYIGRSIQDNSER--FPSVLVQELIDYIGQSH 759 ++ + PS ++E+ + ++ Sbjct: 610 LTNCRSRMVYGHVVMYPPSRFLEEIPRNLIENV 642 >UniRef50_C7HU69 ATP-dependent DNA helicase PcrA n=2 Tax=Anaerococcus RepID=C7HU69_9FIRM Length = 729 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 84/719 (11%), Positives = 198/719 (27%), Gaps = 124/719 (17%) Query: 99 LPQLLEREDFTLLRH----YLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL 154 L L +++ +L + + K L++ A L + V + LA T Sbjct: 3 LSNLNDKQKEAVLHDKGPLLVVAGAGSGKTRVLTTSIAYLIKEKNVNPVNILAITFTNKA 62 Query: 155 VEGLGEAQAWQ-----APLW---------KALVEYTHQLGQPRW-------HRANLYQRF 193 + E + + LW + L +++G + L + Sbjct: 63 ANEMKERISDLLDEDVSHLWIGTFHSICARILRMNINKIGYDNNFTIYDTNDQKTLVKEI 122 Query: 194 IETLESATTCPPGLPSRVFICGIS-ALPPVYL----QALQALGKHIEIHLLFTNPCRYY- 247 I L P + + ++ P ++ I+ + Y Sbjct: 123 INDLNYKDDISPKEALNLISYCKNKSISPKEFLNINTFYAKQEEYYNIYKNYEKKKFEYN 182 Query: 248 ---WGDIK---------DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQD 294 + D+ D L + ++ + E + + Sbjct: 183 SLDFDDLILKTLELFAEDSNTLKYYQDKFEYLFVDEYQDTNKSQYELIKFIGKGHNNVRV 242 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 VG+ + + G D +L F D ++ + N Sbjct: 243 VGDADQSIYSFRGADINNILD----------FEKDFKDAKTIKLEENYRSTSNIINVANK 292 Query: 355 IEEF---SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + + + N S + + E + + D + ++L + +D+ ++ Sbjct: 293 LIKNNSERKEKNLWTSKNDGSEVLYKKSSVESEEGKFVIDEINSLL--NDGYRLKDMAIL 350 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 +F L Y + ++ IS L + + + Sbjct: 351 YRMNAQ-----SRIFEEYLMKNLLDYKVVGGLKFYDRKEIKDLISYLKILVNPKDDISLK 405 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +++ P + I ++ + L + N+ G Sbjct: 406 RIINEP----KKGIGDKTVEKLEKEANKLGF----------------------------- 432 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 + V S L ++L L +E + Sbjct: 433 ----------SLTELVCDPSLFSNLPSKLKSSCEKFYNPLAEIFDNYKDYDIVELIEEIL 482 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 L ++ + + I+ + I + + + L+ D ++ Sbjct: 483 DKSGYIRALEESYSVENRSRIDNLNEFISSAAEYQSNNPEDNIHDYLENLSLLSDLDK-- 540 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 +++ T+ + + FKV ++GM++G++P + + D ++ Sbjct: 541 TEDKDDSISLMTIHSAKGLEFKVCFVVGMDEGLFPSKRSI-------------DEGNIEE 587 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALN 768 +R + A+ A +KLY+S Q PS + E+ I + Sbjct: 588 ERRICYVAITRAMEKLYLSSAEIRRQFGQPVYYKPSRFLNEVESSIKKIDQDKTPAYSP 646 >UniRef50_Q2RGX9 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=Q2RGX9_MOOTA Length = 729 Score = 242 bits (616), Expect = 7e-62, Method: Composition-based stats. Identities = 85/664 (12%), Positives = 174/664 (26%), Gaps = 111/664 (16%) Query: 166 APLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRV-------------- 211 L + ++ + + E L+ P R Sbjct: 96 RILRREAHLLGYRPNFVIYDTDDQQAALKEVLKELDLDDKKYPPRSLAQVISMAKNDLKT 155 Query: 212 ---FICGISALPPVYL--------QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKL 260 F+ G + + L+ L L+ + W ++P L Sbjct: 156 PERFLDGAATFREQQQGQIYRRYQEKLRELNAMDFDDLIMQTV--FLWQ--QNPLVLRYY 211 Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDLES 319 R + ++ + L D VG+P +G G D +L Sbjct: 212 QQRWQHILVDEYQDTNHAQYILVRLLAGKGDNLCVVGDPDQGIYGWRGADIGNIL----- 266 Query: 320 SQELDAFVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITF 376 AF + P + ++ + A A + E R + Sbjct: 267 -----AFEEDFPRARVILLEENYRSTRPILQAANAVIQHNEGRREKRLWTRRREGELLHL 321 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 + + E + + ++ D V+ A +P Sbjct: 322 YRATDERDEGRFIAGEVYRRHQQ-EGRPFSDFAVLYRTHAQ-----SRALEEAFIQAGVP 375 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 Y I ++ ++ L + + S +L +++VP R I E L L Sbjct: 376 YEIVGGLKFYQRKEIKDILAYLRVIANPDDSLSLLRIINVP----RRGIGEATLARL--- 428 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 A + ++ + D G+ Sbjct: 429 ------------------------------------EAAATSEGESLYRVLERVDTIPGI 452 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 A L L+ L+ R+ ++ + + + +AE + Sbjct: 453 PARGRQALRELVEMLDNLRQQ-QEKITVTDLVATILQETGYQAELEAERTPEAQARLENL 511 Query: 617 QAIIAEGLGAQ-YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 + L ++A + + S V + T+ + + F VV Sbjct: 512 KEFQTVTRSYDQGAPESSLGDFLTQVALVAESDTYS---GNAAVALMTMHTAKGLEFPVV 568 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 L G+ +GV+P + D + +++R L + A++ LY+++ Sbjct: 569 FLAGLEEGVFPHFRS------------LDDPAEMEEERRLCYVGMTRAREVLYLTHAWTR 616 Query: 736 IQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 S PS + E+ + Q + SE R + P Sbjct: 617 NLYGSTMSNPPSRFLDEIPADLIQGEGTGLRSGVLSRTSEERDDRGRSTRRQPAPARSTR 676 Query: 794 YQPG 797 Sbjct: 677 ASWQ 680 >UniRef50_B2A5W4 UvrD/REP helicase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A5W4_NATTJ Length = 726 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 50/513 (9%), Positives = 139/513 (27%), Gaps = 84/513 (16%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIY 312 P L + + ++ + + L D VG+ + + G D Sbjct: 196 PDRLQYYQNKFQYILVDEFQDTNPAQNRLISLLSPPQDNVFVVGDDDQSIYLFRGADVKN 255 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDP 369 +L F P+ ++ ++ + + A + +S + Sbjct: 256 ILE----------FEKTYPNAQVYKLEKNYRSSKTILEAANQVVTNNPSRKSKELWTDND 305 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + ++ + E + + + A I V+ V Sbjct: 306 EGYPLQYYEADDERDEAYFIAEEIRA-----NRYQLPLIAVLYRTNAQ-----SRVLEDI 355 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + Y + ++ ++ L + + +++ P + I + Sbjct: 356 FRKMGISYEVVGGTGFYDRKEVKDIMAYLMVVQCPQSDSQLERIINEP----KRGIGKTS 411 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + L+ YA + + ++L Sbjct: 412 VDKLKD---------------------------------------YANRNNITLFDALLE 432 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + + + + + +R+ + + + E + + ++ Sbjct: 433 V-DYTDISKRGKNSVKKFTDMIGNFRK-MREYLTVRELIEEVAEKSGYLEALRSQNTKEA 490 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + + I + + L + + + V + TL + Sbjct: 491 ETRMENVREIYSMAKEFEAEGGETLQEFLTH-STLMGDIDTWEDEEQAQVVMMTLHSAKG 549 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V L G+ +GV+P + +++R L + A+Q LY+ Sbjct: 550 LEFPGVFLTGLEEGVFPHIRTYDS------------EASMEEERRLCYVGITRAEQVLYL 597 Query: 730 SYIGRSIQDN--SERFPSVLVQELIDYIGQSHY 760 ++ + PS V E+ + + + + Sbjct: 598 TWARERTLNGMTRMLQPSRFVSEIGEDLKDTQH 630 >UniRef50_B8FP41 ATP-dependent DNA helicase PcrA n=10 Tax=Firmicutes RepID=B8FP41_DESHD Length = 755 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 62/539 (11%), Positives = 151/539 (28%), Gaps = 95/539 (17%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYI 311 +P L++ + R ++ + L VG+ + + G D Sbjct: 201 NPEVLSQYQDKFRYILVDEYQDTNHAQYALVNLLAKKYRNLCVVGDDDQSIYMFRGADVQ 260 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLD 368 +L F P+ ++ + ++ A ++ + + + + Sbjct: 261 NILD----------FERDYPEAKTLKLEQNYRSTKSILQAANSVVQNNTERKEKSLWTEN 310 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 I ++V + E + +R+ +L + V+ V Sbjct: 311 EDGQPIVYYVADNEHDEARYMGERIQRLLNV-EGRKFNEFAVLYRTNAQ-----SRVIEE 364 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 +PY I ++ ++ L + + +L+VP + + E Sbjct: 365 RFMKEGIPYRIFSGLKFYERMEIKDILAYLRILHNPADQVSFSRVLNVP----KRGLGES 420 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L + L YA E +++ Sbjct: 421 TLEKI---------------------------------------LDYANEQEMPVLDAIM 441 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 D L + L + + R A E + + + + ++ Sbjct: 442 EADYIPELQSRAKKPLLAFAHLMQELRALAAAESSVTKLVEEVLKRTGYWDNLVSDKSPE 501 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVP----------------LSLLRDELAQRLDQERISQ 652 + + ++ L+ ++++ + + Q Sbjct: 502 AEARLENLREFLSVTAEYDEKADNYETAVVQEGIEDALVPGLTGFLEQVSLVAQIDSLDQ 561 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 V + T+ + + F VV L GM +G++P + D ++ Sbjct: 562 --ADDAVVMMTIHSAKGLEFPVVFLGGMEEGIFPSSRSM------------LDPVLLAEE 607 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNC 769 R L A+ A+++LY++Y + + + PS QE+ ++ Sbjct: 608 RRLCYVAITRARERLYLAYAQQRMLYGRTQYNRPSEFFQEIPTHVLVDRDPIDPPPTRA 666 >UniRef50_C7RHP9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7RHP9_ANAPD Length = 731 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 59/633 (9%), Positives = 173/633 (27%), Gaps = 94/633 (14%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 + Q L K ++ + + + SA + + + Sbjct: 111 DTSDQKTLIKEIINELGYKDDIAP------RDALNVISSAKNKSLDPDEFLKLNTYYSKG 164 Query: 221 PVYLQALQALGK---HIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLF 277 +Y + + + + + + ++ L + ++ + Sbjct: 165 DIYYEIYKKYEEKKFYYNALDFDDLIDKVLYLFVRSKETLDFYQKKFEYVFVDEYQDTNN 224 Query: 278 RDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 E VG+ + + G + +L+ F D Sbjct: 225 SQYELIKYFAGFHNNVTVVGDADQSIYSFRGANISNILN----------FEKDFKDAETI 274 Query: 337 NIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHS-PQREVEVLHDR 392 ++ + +N + E + + + + +S E + + D Sbjct: 275 KLEQNYRSTKNILETANLLIENNSERKDKELWTENKGGDRV-IYKANSVESEEAKFVLDN 333 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 + ++++ +D ++ P F L Y + ++ Sbjct: 334 IKSLMQ--EGYDAKDFAILYRTNAQSRP-----FEEILMKNLLDYKVVGGLKFYDRKEIK 386 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 +S L + + + +++ P + I + + L++ N I Sbjct: 387 DLVSYLKILVNPKDDLSLKRIINEP----KRGIGNKSIEELQRVANLHNI---------- 432 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 + ++ + + + L Sbjct: 433 -----------------------------AILDLITDDSFNTLISDRIKKSTEKFYLPLR 463 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA-QYGDA 631 + + + + + D ++ I+ + Sbjct: 464 EIFDNVDNYK-IVDLIEDVLDKSGYMKSLESSYSVEDRARIDNINEFISSASEYQENNPE 522 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 + + L+ D ++ +++ T+ + + F VV ++G+++G++P + + Sbjct: 523 DNIYDYLENLSLLSDLDK--TESTDNSISLMTMHAAKGLEFPVVFVVGLDEGLFPGKRSI 580 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQ 749 D +++R LF A+ AQ+KL++S PS + Sbjct: 581 -------------DEGNIEEERRLFYVAITRAQEKLFLSSAEARRNYGKPVFYKPSRFID 627 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 E+ID I + + + + + ++ Sbjct: 628 EIIDNIKVEEKISSYGYSSREYEKTMAEDYMRE 660 >UniRef50_A5TXQ2 Superfamily I ATP-dependent helicase n=15 Tax=Fusobacterium RepID=A5TXQ2_FUSNP Length = 737 Score = 241 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 70/532 (13%), Positives = 173/532 (32%), Gaps = 85/532 (15%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRD 309 ++ P L K+ + + ++ + + + S VG+ + +G G + Sbjct: 197 LQKPEILEKVQNKYKYIMIDEYQDTNNLQYKIIDLIARKSSNLCVVGDENQSIYGFRGAN 256 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL---ENRAVAGVNIEEFSRSDNKRP 366 + +L+ F + + + ++ + + A + + S+ Sbjct: 257 ILNILN----------FENNYNNAKIVKLEENYRSTTTILDAANELIKNNKSSKDKKLWT 306 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 + I C + + EV + + + + + RD+ ++ +F Sbjct: 307 QNGKGDLIKVLACDNGRDEVSRIIEFIRENHQN--GVPYRDMTILYRTNAQ-----SRIF 359 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 +P+ + + S ++ I+ LS+ + ++ +++VP + + Sbjct: 360 EEGLLRYNIPHKVFGGISFYSRAEIKDIIAYLSIIVNPQDELNLQRIINVP----KRKVG 415 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 E+G+ + YA E+ ++ Sbjct: 416 EKGIEKII---------------------------------------AYARENDLNLLEA 436 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN--AFFLPDAE 604 + E SGL A L + + + LA + D ++ + + + Sbjct: 437 LSHIKEISGLTAVGKEKLLEMYDIIKELKD-LAYTETASYIVQTLIDKIHYIDYINENYD 495 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 A +++ I E + L+ + ++ L + V + T+ Sbjct: 496 DAEARIENIDEFKNSILELENVVGE--LRLNEYLENVS--LISATDDLEEKSDYVKLMTI 551 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + + F +V L+G + ++P A D +++R L AL A+ Sbjct: 552 HNSKGLEFPIVFLVGFENEIFPGTRAM------------LDEKEMEEERRLCYVALTRAE 599 Query: 725 QKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 +KLY+S+ +R PSV ++E+ + + D S+ Sbjct: 600 KKLYLSHATIRFVYGQDRLSTPSVFLKEIPEKLLDIEVKKERLYFADDYSDE 651 >UniRef50_C0R0K3 ATP-dependent DNA helicase n=2 Tax=Brachyspira RepID=C0R0K3_BRAHW Length = 665 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 81/612 (13%), Positives = 191/612 (31%), Gaps = 74/612 (12%) Query: 163 AWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPV 222 + L + ++ NL+ +I+ ++ P + + + Sbjct: 111 SDSRTLIRNILREIKINTLNYDE--NLFAWYIDRFKNNLMKPYEVEPH---DDLEKIAKR 165 Query: 223 YLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSEN 282 + Q+ K ++ P L K R R ++ + F + Sbjct: 166 VYEVYQSYLKGYNAVDFNDLINLTIDLYVEFPEVLNKYQERFRYIMVDEYQDTNFAQYKL 225 Query: 283 AGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD 341 L + VG+ + + G D +LS F + PD + + + Sbjct: 226 TTLLASKYRNIAVVGDDDQSIYAFRGADVSNILS----------FENEYPDAKIVTLTKN 275 Query: 342 ILELENRAVAGVN-IEEFSRSDNKRPLDPLDSSI--TFHVCHSPQREVEVLHDRLLAMLE 398 + A + I ++ +K+ + + I T C + E + + D ++ Sbjct: 276 YRSTKAILEAAHSVISNNTQRKDKKVVAEGEEGIPPTIMPCEDEREEAQFVADSIINY-S 334 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 L D V+ +F A R LPY + ++ ++ L Sbjct: 335 ISKRLNYEDFAVLFRMNAQ-----SRLFEEAFRLRGLPYTVVGAFQFYERKEIKDILAYL 389 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 +L + +L ++++P + I + L + ++G+ N ++ + Sbjct: 390 NLFVNPEDEVSLLRVINIP----KRGIGAVAINNLNEASIKNGVSLYETLLNYESMDDIS 445 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 ++ Y ++ D+++ +L ++ L + L Sbjct: 446 PKAKAGIKDFLEVIDHY---------HNLFTVDKNALERPKLYENINKFLDVIAYHNEIL 496 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 E + M +E I+ + L Sbjct: 497 NSSDTKE------------------QGAKKMENVESLMNGILEY---EKSNKNATLKNYL 535 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 D + +E+ + + ++ + + F V + GM DG+ P Q + Sbjct: 536 DRILLMSIEEQNDDEDKKKGIMLMSIHAAKGLEFPYVYICGMEDGIMPHQKS-------- 587 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIG 756 D + +++R L A+ A++ L ++Y + E PSV ++E+ + Sbjct: 588 -----LDENGLEEERRLCYVAMTRAKKHLTLTYCRSRTKMGKKVECTPSVFLEEMSANLP 642 Query: 757 QSHYLPGDEALN 768 + + +E + Sbjct: 643 EEMAMNEEEFFS 654 >UniRef50_C2EDG9 ATP-dependent deoxyribonuclease, subunit B n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2EDG9_9LACO Length = 1170 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 115/1067 (10%), Positives = 277/1067 (25%), Gaps = 176/1067 (16%) Query: 18 EFIVERERLDDPFEPEMILVQSTGMAQ-------WLQMTLSQKFGIAAN--IDFPLPASF 68 + + R ++P +V + + +++ SQ I A + Sbjct: 19 FEQLAKWRKENPNRMVYYIVPNHIKFESEVNALKYMRQIFSQDEKIFAAHDLQVFSFTRL 78 Query: 69 IWDMFVRVLPE-IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQL 127 W + IP+ S+ + ++++ L L+ + +S + QL Sbjct: 79 AWYFMKDMPAYQIPRISSAGSNMIIYRILRDLKD--------ELQVFSGGESQPGFITQL 130 Query: 128 SSKAADLFDQYLVYRPDWLAQWETGHLVEGL------GEAQAWQAPLWKALVEYTHQLGQ 181 + + +L Q P+ + Q E L A ++ +E T Sbjct: 131 AKQMTEL--QNGCIMPEDVMQMAEKLPKESLGSKALLRSKLHDLALVYTRFIEMTSGRYL 188 Query: 182 PRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 +++E ++ S I G + + + ++ L + Sbjct: 189 ANMEILTELTQYLEKIDLQN-------SCFLISGFNQMTAREMLLVEKLIE--------- 232 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA 301 ++ + + D GN Sbjct: 233 -------------------------NAESVVVDLVLNHPYVDEPPKSGDLFYRAGN---- 263 Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 Y L + +D + D+ LE+ + V + Sbjct: 264 --------LYYQLYAHAHKSKSPVMLDTY--AKKTRVSQDLCNLEDYWINSVA---GFSA 310 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 K + S+ + + E+ ++ M+ +D +++ +D Y Sbjct: 311 KEKATF--ENDSVKIYGAKTRTEEIRFAAAKIRQMVAV-EGYRYKDFLILTRHLDLYKNV 367 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 ++ +F A +P + ++ HP++E +L ++ + D++ LL +L Sbjct: 368 LEPIFAKA----KVPIFVDLQKKVSDHPLVELLNALFAVKRRHYRYNDMMRLLKTELLIP 423 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 + E R L Q N ++E + FG + Sbjct: 424 KDLKVETYRRMLDQTENLILKFGYEGSAWLKEKDWIYYRFGESDFGTRTDAEDRITKEVN 483 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 + V + + + L + ++ LE+W + Sbjct: 484 VIRRYVKEILPPFFKQIDEAENGRKAAVCLVNFLVDNGVKKRLEDWRQNLME------QG 537 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVN 660 + + + ++ E + + L D + + V+ Sbjct: 538 LLQESERPEQVWNLFCQMMDEFVENLGDLPFEEEDFLNLLQTGFDAGEYRRVPASLDEVS 597 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD--------- 711 I ++ KVV ++G D V P ++ + + + + Sbjct: 598 ISETGMVQPTDRKVVFMIGSTDLVMPDRIQNKSLLSDGDRSLMLENALLSENQVLDETSE 657 Query: 712 -----DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI--GQSHYLPGD 764 + +L A +S +KL +Y + D S V+ + + + D Sbjct: 658 KSMLSEPFLNYLAFLSPTEKLIFTYPHGNDADGG-IKMSPYVERIKQHFLLEELEISEFD 716 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQ-NYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 + + + + P Q + + + + + Sbjct: 717 KLSTPKGTIEDLICEIRRHADEKNSVPAFWKQVYAKMKTVDAEMTEKVMSSLRYRNIPEQ 776 Query: 824 LPFTLPETVP-------LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS 876 L + + L+ F+ +P F + L + R F + S Sbjct: 777 LTAQNARKLYGKELNTSISKLETFYKNPYEYFLRYGLGLMERDV---------FEMSAAS 827 Query: 877 RYQINQQLLNALVE-----------------QDDAERLF-------RRFRAAGDLPYGAF 912 +L+A + E + G Sbjct: 828 TGSYFHAVLDAFFRLLFKNNLTLKNLSSEQFNEIFEETTSLVSKDPQFMILKSSNRMGFI 887 Query: 913 GEIFWETQCQEMQQLAD-------RVIACRQPGQSMEIDLACNGVQI----------TGW 955 + +T Q + + + R + + ++ G+ I G Sbjct: 888 ERLLNDTLSQTLWAVRNQRNYGHVRTLRTEALFGHVGVEEGLKGLLIKTPKGNQVNVRGK 947 Query: 956 LPQVQPDG---LLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLF 999 + ++ + + A Sbjct: 948 IDRIDETIGAGDKYLGVIDYKSGARKFNYAQAYYGIALQLLTYLDAL 994 >UniRef50_A7KV33 PcrA helicase n=1 Tax=Bacillus phage 0305phi8-36 RepID=A7KV33_9CAUD Length = 657 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 59/514 (11%), Positives = 150/514 (29%), Gaps = 85/514 (16%) Query: 256 YLAKLLTRQRRHSFEDRELPLFRDSE-NAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLL 314 K R + ++ + + + + VG+ +G G + +L Sbjct: 219 VRRKFQRRYKYIMCDEYQDTNECQYRMIKNIVGDKNNIFVVGDDYQGIYGWRGANIEKIL 278 Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS---DNKRPLDPLD 371 + F P + ++ + AG I + + + Sbjct: 279 N----------FQKDYPGTKVVKLEQNYRSTNTIVTAGNAIMKHNTKQMNKTCFTDKGMG 328 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 I + ++E + + + D DI ++ + Sbjct: 329 EKIRKYEAPDDEQEARFIAQEIQNLCTFD-GYKYEDIALLYRTN-----VQSRLLEDQFI 382 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +PY + + ++ +S + L + + L + + + ++ Sbjct: 383 RHNIPYNMVSGFSFYERKEIKDIMSWMQLAVNPDNDIACDRI-----LNMQAGVGKTTIK 437 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 ++ A E + ++ V ++ Sbjct: 438 QIKD---------------------------------------KANEKNKSIYEVVEYFN 458 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLA--QERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + L + +LN ++P+ + L + + Sbjct: 459 PKTAKAKAAFVGLTDTVARLNALYEAGKSVSDQPITDMLELIFKYTQYIEKLQETGKEED 518 Query: 610 TLIEQQWQAIIAEGLGAQYGDA-VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + + G + + L D++A + Q+++ V + TL + Sbjct: 519 FRRIDNIKELTKIAKGYEQENKDPHLQDFLDQIALQSQQDKV---VNQDKVQLMTLHTSK 575 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + + VV ++GM +G++P + D + +++R L + AQ+ LY Sbjct: 576 GLEYPVVFMIGMEEGLFPHSRS------------LSDTVQLEEERRLAYVGITRAQEILY 623 Query: 729 ISYIGRSIQDNSE---RFPSVLVQELIDYIGQSH 759 ++ R + N + PS ++EL D + Q Sbjct: 624 FTHAERRMDYNRTYNWQTPSRFMEELPDELIQEV 657 >UniRef50_UPI000051001F putative ATP-dependent DNA helicase II n=1 Tax=Brevibacterium linens BL2 RepID=UPI000051001F Length = 850 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 84/631 (13%), Positives = 172/631 (27%), Gaps = 68/631 (10%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 L +++ + R+ L++ I L++ P R L Sbjct: 131 DSQDAQRLVSQILKELGIDTKKYTPRSMLHR--ISNLKNDLQTPDDFIPRANNPADEVLA 188 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 V+ + L + P R R ++ + Sbjct: 189 DVFKRYTSRL-RLANAFDFDDLISETVHLFGAFPEVADFYRRRFRHILVDEYQDTNPAQY 247 Query: 281 ENAGQLFNSD-------GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDN 333 L VG+ + + G ++ F P+ Sbjct: 248 ALIKALAGDGAGGATGAELTVVGDSDQSIYAFRGATVRNIME----------FEKDFPNA 297 Query: 334 LLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSPQREVEVLH 390 ++ + +N A + + + +I V + Q E + Sbjct: 298 ETILLEQNYRSTQNILDAANAVISNNQDRKDKKLWTSEGTGETIVGWVAENEQAEARFIV 357 Query: 391 DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 DR+ +++ + T D V A +PY + Sbjct: 358 DRVDELIDNEK-YTYGDFAVFYRTNAQ-----SRAIEDALVRSGIPYKVVGGTRFYERKE 411 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW-GIDDD 509 ++ ++ L + + ++ +L+VP + I + + + + GI + Sbjct: 412 IKDALAYLRVVANPDDDVNLRRILNVP----KRSIGDRTEGIVADFADREGISFYTALGR 467 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS--- 566 + L A + + M A A + + E SG + L Sbjct: 468 LDEIVHLSARAKTSVAKFYDLMRDLAATAEAAPLSRVIEAILEQSGYLESLQKSTDPQDE 527 Query: 567 ----LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA------------ETEAAMT 610 L +L R L + + E A Sbjct: 528 SRVDNLAELVAVAEDFVATRALADATDDEDADDADAEAAETGSSTAVDEGSSAEDGDAGD 587 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 + EG A + +++A D ++I L G V + TL + + Sbjct: 588 STDDAGADAADEGRDAPSAGGSSIEAFLEQVALASDTDQIPDAEL-GQVTLMTLHTAKGL 646 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 F VV L G+ DG +P + S ++R L L A+Q+L ++ Sbjct: 647 EFPVVFLTGLEDGGFPHARSFEN------------PSELSEERRLAYVGLTRARQRLIVT 694 Query: 731 YIGRSIQDNSER--FPSVLVQELIDYIGQSH 759 + PS + E+ + + + Sbjct: 695 RAETRSMWGQPQYNPPSRFLSEIPESLIEWE 725 >UniRef50_A5GA79 UvrD/REP helicase n=10 Tax=Desulfuromonadales RepID=A5GA79_GEOUR Length = 678 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 82/642 (12%), Positives = 181/642 (28%), Gaps = 98/642 (15%) Query: 163 AWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP-- 220 + Q L K ++ + G+ + +++ I ++ P R F + Sbjct: 115 SDQIGLVKQIMREVNIDGKKYDADSIIWK--ISAAKNKLIPPDRFTPR-FGDEYELMAAE 171 Query: 221 --PVYLQALQAL--GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL 276 P Y AL+A +I +L + + + P L R R ++ + Sbjct: 172 VYPRYQSALKAFNAIDFDDIIMLTADLLQNH------PEVLQHWQERFRYVMVDEYQDTN 225 Query: 277 FRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLL 335 L VG+ + +G G D +L F + + Sbjct: 226 ASQYLLVNLLAGGYGNLCVVGDDDQSIYGWRGADVGNILD----------FEKDFKECRV 275 Query: 336 HNIQSDILELENRAVAGVN---IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR 392 ++ + N A + + + V + E + +R Sbjct: 276 VKLEQNYRSTGNILEAANHVIGHNAKRKEKRLWTASGSGRPLDLIVMQDDEEEATTVVER 335 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 + M L D ++ P F +PY + ++ Sbjct: 336 M-QMERFKHNLAYSDFAILYRTNAQSRP-----FEEQLRFEDIPYVLIGGMQFYERKEVK 389 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 IS L + + +L +++ P R I + + + QW E G Sbjct: 390 DAISYLKVIGNSNDEIALLRIVNFP----RRGIGDSTVVKINQWSMEQGCP--------- 436 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 ++ +E G++ + L Sbjct: 437 ------------------------------LLEAFGRVNEIEGIVEATRNRVQDFYRLLQ 466 Query: 573 IWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG- 629 + E L E L + A + + II + Sbjct: 467 GAVEEFSGEGDLAEKGRRLFKQLGLEDELYRTIDDPALARRKVENVEQIINSMAAYEERI 526 Query: 630 DAVPLSLLRDELAQRLDQE---RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 LS ++++ + + + V + +L + + F V L+GM + + P Sbjct: 527 PKPTLSGFLEKVSLMDEDRFSGKDKKEHGRDAVTLMSLHSSKGLEFPYVFLVGMEEEILP 586 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFP 744 + + + D++R L + A++ L ++ + + ER P Sbjct: 587 HKRSIYEDFTV------------DEERRLCYVGITRARKHLIMTRCLQRKKYGKLQERVP 634 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 S ++E+ ++ + L +E++ + Sbjct: 635 SRFLEEIPGHLLNEQKGAAAKVLTEEEADKMAHDSFARIKAM 676 >UniRef50_D0LJZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJZ3_HALO1 Length = 787 Score = 239 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 82/647 (12%), Positives = 174/647 (26%), Gaps = 87/647 (13%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 Q L AL++ Q + I+ +S P + + Sbjct: 111 DSDDQKRLLNALIKEHGLEDQVSAKTLAVQ---IDRCKSRDEDPMDRHGGWGDDLLREIY 167 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 P+Y + G LL +DP L R ++ + Sbjct: 168 PLYQAGMAQQGAVDFNDLLLK-----VLELARDPTVGPVLSARFDHVLVDEFQDTNRVQF 222 Query: 281 ENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQ 339 + VG+ + + G + LL F PD + ++ Sbjct: 223 RLVRHFADVSRNLTVVGDDDQSIYSWRGAEPRNLLE----------FKRDYPDAEVVKLE 272 Query: 340 SDILELE---NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 + + A A + SI + C S + E + + + Sbjct: 273 QNYRSTSVILDAANAVIAKNRNRHEKALWTASDGGESILWEPCPSDREEATFIARAIRGL 332 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + D+ ++ + Y I + ++ IS Sbjct: 333 VSA-ENRDFSDMAILYRTRAQ-----SRQLEEQLRRFDIHYEIIGDVSFFQRREVKDIIS 386 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 L L +++VP I + + +R Sbjct: 387 YLRLLVQPNADLAFERIVNVPA----RGIGKTTVERVRD--------------------- 421 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG--LIAELVGHLASLLMQLNIW 574 YA + +++ + SG L A L + L ++ Sbjct: 422 ------------------YARRAELPLFEAARACADGSGGSLAARARNKLRAFLDIVDGL 463 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD--AV 632 R +A + E + + E + +++ G + Sbjct: 464 RDVMAAGASVAEIVIQTVERSGYSAALTKEGTLEAEERLKNLSELVSWGSSFDEEEGEDA 523 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L +A + ++ G V + T+ + + F VV L G+ +G++P Sbjct: 524 SLVEFLANVALQSSGDKAESG-DRGKVKMMTIHAAKGLEFPVVFLCGLEEGLFPS----- 577 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQE 750 + ++ + D +++ L A+ A+++L ++Y + + R PS + Sbjct: 578 ----LRERDDQNDGDTLEEEYRLAYVAITRARERLVLTYAMQRMIWGETRSQRPSRFLDS 633 Query: 751 LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG 797 + D P A + +D + Y Sbjct: 634 IPDDCLAVRAEPPPPATTTHYDDYGSTLRRRRRPAADEYDQRVYSSA 680 >UniRef50_UPI00016B20E8 ATP-dependent DNA helicase PcrA n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20E8 Length = 702 Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats. Identities = 60/533 (11%), Positives = 142/533 (26%), Gaps = 85/533 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIY 312 P K + ++ + L + VG+ + + G D+ Sbjct: 204 PEVRKKWQDHFKYIMIDEYQDTNAAQYLIVSLLTNDKKNICVVGDDWQSIYSWRGADFRN 263 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILEL---ENRAVAGVNIEEFSRSDNKRPLDP 369 +L+ F + ++ + A + Sbjct: 264 ILN----------FEKDFSGAQIIKLEQNYRNTGAILEAAQNVIIKNNQRTDKKIWTAGN 313 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + + + E + + + +E D ++ A Sbjct: 314 QGDPVEVYSALDDKSEAAWIANVISNKVESGE-YNFDDFAILYRTNSQ-----SYTIEQA 367 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 R +P I V++ ++ + L + + +VP + Sbjct: 368 LNQRSIPLNIVGGTRFFDRAVIKDIMAYVRLCYQPNDMSSFMRIANVP----SRGVGPTS 423 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L W ++ + ++ Sbjct: 424 LAKFISWQGQTEM---------------------------------------DIISALKQ 444 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 E++ + A L L +L I R + + L D + + Sbjct: 445 SGEATTITARARNALQELGCKLQIIRSEILNNTAPSDILEKVID-KTGYRDYILDGSPQA 503 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + +I E + +E++ + S++ G V + TL + Sbjct: 504 EDNNEYLNTLIDE-----SRPYADIETYLEEVSLMSSSDLQSEK---GYVTLMTLHAAKG 555 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F VV + GM +G+ P G+ +++R L + A+++LY+ Sbjct: 556 LEFPVVFMSGMEEGILPHSRTLD-----------GNPDDLEEERRLCYVGMTRARERLYL 604 Query: 730 SYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 S+ Q N ++ PS + + +I + + D + + Sbjct: 605 SHSASRYQFNQRKYNDPSRFLCDAGLFIVNNESQEEAYVESYDTFYDDINLEI 657 >UniRef50_D0JAI1 ATP-dependent DNA helicase n=2 Tax=Blattabacterium RepID=D0JAI1_BLASB Length = 709 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 62/558 (11%), Positives = 167/558 (29%), Gaps = 85/558 (15%) Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG 284 + LQA + LL TN ++ P L K + + ++ + + Sbjct: 169 RCLQAEALDFDDILLHTNHLFSHF-----PNVLRKYQNKFKYILIDEYQDTNLSQNTIIK 223 Query: 285 QLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL 343 L VG+ + + G +L+ F + + ++ + Sbjct: 224 SLAFQHKNLFVVGDDAQSIYAFRGAKISNILN----------FHIDYKNAKVFRLEQNYR 273 Query: 344 ELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 + A NI + + + + S + E + + +++++ Sbjct: 274 STHHIVQASNNIISFNKNQILKKIWTNNEKGEKVKIYSASSEKEEALYVASSIFSIIKKT 333 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 +D ++ + + A ++ +PY I + + + ++ L + Sbjct: 334 K-YHYKDFAILYR-----ANMQSNIIEYALKEKNIPYKIYGSISFEKRKEIRDLLAYLRI 387 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 + E +L + ++ ++ + Sbjct: 388 IVNSNDEESLLRI--------LKKGNKKTIKSILD------------------------- 414 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 L + +++ Y L + L +L+ + +R+ + Sbjct: 415 -----------LSKKIRITVYEIIKNIENYQHLLILNQKTKNKLKNLISTIEKFRKNTEK 463 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 + + +L P I ++E + + LS Sbjct: 464 KDAFAIAKEIVNFLLKE--DPKNYKNENFQYILNNIFCYVSEQKKLKDNGEISLSGFLQY 521 Query: 641 LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 +D++ V++ T+ + + F +V ++G+ + ++P + + Sbjct: 522 FYLEIDEDMNHDENEENKVSLMTVHLSKGLEFSIVFIIGLEENLFPSKSS---------- 571 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQS 758 ++ + +++R LF AL AQ+K ++Y + PS + EL Sbjct: 572 --LDNQFKIEEERRLFYVALTRAQKKAVLTYARSRFLWGERKMTLPSRFINELNKNFIDR 629 Query: 759 HYLPGDEALNCDESEARV 776 +L+ + + Sbjct: 630 ENQNSISSLSEKKEINSL 647 >UniRef50_B3EU74 UvrD/REP helicase n=4 Tax=Bacteroidetes RepID=B3EU74_AMOA5 Length = 757 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 62/553 (11%), Positives = 161/553 (29%), Gaps = 81/553 (14%) Query: 256 YLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLL 314 L K R + ++ + L VG+ + + G + +L Sbjct: 211 ILYKYQERFQYILIDEFQDTNLAQYAIVKDLAGIHKNICVVGDDAQSIYAFRGANIRNIL 270 Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR---SDNKRPLDPLD 371 + F P+ + ++ + +N A I ++ N + Sbjct: 271 N----------FEKDYPNLTIIKLEQNYRSTQNIVEAANGIIRNNQLQLKKNVWTANEKG 320 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 I + E ++ + + ++ L D ++ A Sbjct: 321 EVIGLIRATTDAEEGRLVAASIFEIKMQNQ-LRNEDFAILYRTNSQ-----SRAIEEALR 374 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 LPY + + ++ ++ L + E + +++ P + I + Sbjct: 375 KINLPYRMLGGTSFYQRKEVKDLLAYLRFIVNHNDEEALKRIINEP----KRGIGPSNIE 430 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 + ++ G +P + A+E Q++ Sbjct: 431 KMVVAASDHG--------------IPLWEVMCNAKNFLSGRVAEAVEEFAHMIQAMA--- 473 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 L + +AS + + + + L +++ +E Sbjct: 474 --LDLTKKDAYEIASEIAKRSGLLKSLYEDKTVEGLARY--------------------- 510 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ-RLDQERISQRFLAGPVNICTLMPMRSI 670 + Q +++ + L L L ++ +++ T+ + + Sbjct: 511 --ENVQELLSGIKAFTANPEQVDTSLATFLQDVALATNNENEEDGEDKISLMTIHAAKGL 568 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 FK V ++G+ + ++P + G R +++R LF AL AQ+K+++S Sbjct: 569 EFKYVYIVGIEEDLFPSSMM------------LGSREDLEEERRLFYVALTRAQKKVFLS 616 Query: 731 YIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP 788 Y + + S + E+ ++ + + + + + Sbjct: 617 YTISRYRFGKLKQCEVSRFIGEIDPVYLHMAHVTNSYTEKSNTNYTKQFISSMRITPQQK 676 Query: 789 FDPQNYQPGERQS 801 +Q + S Sbjct: 677 SVKVKFQAYAQSS 689 >UniRef50_Q1IVP8 ATP-dependent DNA helicase, Rep family n=2 Tax=Bacteria RepID=Q1IVP8_ACIBL Length = 849 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 62/560 (11%), Positives = 154/560 (27%), Gaps = 78/560 (13%) Query: 256 YLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLL 314 + R + ++ + E L VG+ + + G D +L Sbjct: 210 VRERYNRRFQYVLIDEYQDTNRPQYEIMRALAGTLHNVCAVGDEDQSIYSWRGADIRNIL 269 Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLD 371 F P+ + ++ + +N A + + + N Sbjct: 270 E----------FEQDFPEAKIVRLEQNYRSTQNILEAASAVVKNNLKRKGKNLWTERMGG 319 Query: 372 SSITFHVCHSPQREVEVLHDRLLA--MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + + ++ + E + D + M+ D P+ V+ +F A Sbjct: 320 AKVGYYEAPDGENESLFVADYINKYLMIAHDEDDEPKRAAVLYRTNSQ-----SRLFEEA 374 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + Y + + ++ IS L L + S +L ++ P I + Sbjct: 375 MRRYGIKYNVVGGFSFYERAEIKDMISYLKLIQNPSDSVALLRTINTP----TRGIGKTT 430 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + + + E+ + ++ E L G ++ + ++ Sbjct: 431 VEQIERIALETNLPLWDALGHIVEQRLMQPRACAALKGFRELIQDARAMLYGKFEERLVE 490 Query: 550 -----------YDESSGLIAELVGHLASLLMQLNIWRRGLAQERP--------------- 583 E +L ++A +L + E Sbjct: 491 TAQVSKPEESDAAEPEIADEDLQDNMAFDFGELEPDAEEFSPEALGTAEEAAPEKVEGFR 550 Query: 584 -------LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 + E L D +AE + + ++ + ++ Sbjct: 551 SPGENANVSEVLKFLIDRTGYIKQLEAEDTPESLARIENLRELVNAAMDSRDRG----ET 606 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + D L V + T+ + + F +V ++GM +G++P Sbjct: 607 IADFLDHAALVADTDDIEAGAQVTLMTMHAAKGLEFPLVFIVGMEEGLFPSSRT------ 660 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF----PSVLVQELI 752 + +++R L + A + L +S + ++ S + E+ Sbjct: 661 ------LMNPDEVEEERRLCYVGMTRAMRILVLSRARYRRRYGTDMPDASTASRFLSEVP 714 Query: 753 DYIGQSHYLPGDEALNCDES 772 + + P + + Sbjct: 715 PQLFEDIGSPQKKTPVFGDD 734 >UniRef50_B9XFA2 ATP-dependentnuclease subunitB n=1 Tax=bacterium Ellin514 RepID=B9XFA2_9BACT Length = 1129 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 151/1086 (13%), Positives = 294/1086 (27%), Gaps = 152/1086 (13%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAA--NIDFPL 64 S + + ++ E P +++ Q L+ L +A + Sbjct: 12 SGKTFRCLTEIRKVLAVEPDGPPL---LLIAPKQTTYQ-LERQLLAYPSVAGYTRLQILS 67 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 + +F + P+ L E +LR L D+ KL Sbjct: 68 FERLAFFVFNSLQKPPPQM------------------LDEEGRLMVLRSLLARKRDELKL 109 Query: 125 FQLSSKAADL----------FDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 F+ S++ A + + E H VEGL L L + Sbjct: 110 FRASARLAGFAQHLSRVLRELQHHQLTPESLHELAEQVHAVEGLSYKLHD---LGTMLRD 166 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 Y L + F + P +++ G + L P L L + Sbjct: 167 YLDWLQAHHLQDGDNLLTFATEVLREPHAPLNFGE-MWVDGFTDLSPQELDLLAQI---- 221 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 + + D + S+ R + + F + Sbjct: 222 -----IPHVPQATLTFCLDQVPTER-------ISWLSNWSVPRRTYDRCQKRFAGLPNVE 269 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 + LLA R ++ ++ LH+++ E + A Sbjct: 270 LSKELLARHMNRSR-FLN-------------------NSPLHHLEQHWAEPKPFVDAATA 309 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 +S S+ C +P+ E + +L + R++ ++V Sbjct: 310 ARPYSLR----------ESLRVITCTNPEAEATLAAREVLRFVRS--GGRFREVTILVRK 357 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 +D+Y + +PY + R A HP+ E + L + +D A L Sbjct: 358 LDNY----HEALANTFKRYDIPYFLDRREAVSHHPLAELTRNALRTVAFSWSRDDWFAAL 413 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 ++ A + + L G + L W L R ++ Sbjct: 414 KTGLVPAE----DTEIDRLENEALARGWKGSTW--QHPILIHDNPELTEWAENLRRKIVP 467 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 A + L L + + L + L+EW Sbjct: 468 PFKNLA------------VNMGQQSNRPSGRHLAAALRDFWQSLKVDETLQEWSDAEIAG 515 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 ++ P + +Q A + A + +PL L L + Sbjct: 516 SDSQLAPPI-----HLTVWEQMNAWLENVELAFPTETLPLREWLPILEAGLANLNVGVIP 570 Query: 655 LA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD-------- 705 A V I + R+ ++ +LGMN+GV+P + + + Sbjct: 571 PALDQVLIGAIDRSRNPDIRLALVLGMNEGVFPAPPEQSVLLTDADREELKKKDVELGAS 630 Query: 706 -RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 R + +RY A A+Q++ ++ PS + +L Sbjct: 631 TRQQIGHERYYGYVACTRARQRVVLTSAIFDAA-GKPLNPSPFLSQLKQLFPSLETETFP 689 Query: 765 EALNCDESEARVKAHLTCLHTR--------MPFDPQNYQPGERQSYAREWLPAASQAGKA 816 ++L+ +SE + + L + N P R + + ++ Sbjct: 690 KSLDWRKSEHANELIVPLLRNQVQSPISKVQGVSALNKFPALAALRERLKHFSTTPTEES 749 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS 876 S + + + +++F A P + F L+ R + F L+ Sbjct: 750 LSPELAERLYGPALRTSVSRMEQFAACPFKFFVHSGLRAEERKK---------FELDIRD 800 Query: 877 RYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ 936 + ++L + EQ E R + I L R Sbjct: 801 QGNFQHEVLASFHEQLKTEN-KRWRDISPQEARERIKSIALTMMVSYRDGLLQVSEETRF 859 Query: 937 PGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGES 996 + + L + GW+ Q + + G Sbjct: 860 TARVLTESLQDFVETLVGWMGQQYA--------FDPKAVELPFGEDLFPAWELELGKDHK 911 Query: 997 RLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDA 1056 L + +E A L +++ Y+ +L E G Y Sbjct: 912 LLLHGRIDRIDICR-ESEDAEEALCVVVD-YKSSQKQLDPLLMEHGLQLQLAAYLNVLRH 969 Query: 1057 MLDDDS 1062 D Sbjct: 970 WPDPRP 975 >UniRef50_Q28NL8 ATP-dependent DNA helicase, Rep family n=11 Tax=Rhodobacteraceae RepID=Q28NL8_JANSC Length = 817 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 79/688 (11%), Positives = 173/688 (25%), Gaps = 82/688 (11%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVF-ICGISA- 218 Q L K L+ + + A I+ ++ P +PS Sbjct: 140 DTDDQTRLMKQLI--IAEEIDDKRWPARALGSIIDGWKNRALTPDKVPSADHGAFNHQGV 197 Query: 219 -LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLF 277 L Y L+AL LL + + + + L + R ++ + Sbjct: 198 KLYAQYQARLKALNACDFGDLLL-HVIQIFQD---NDDLLQQYQRWFRYILVDEYQDTNV 253 Query: 278 RDS-ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 VG+ + +G G + +L F P + Sbjct: 254 AQYLWLRLLAAGHKNICCVGDDDQSIYGWRGAEVGNILR----------FEKDFPGAHVV 303 Query: 337 NIQSDILELENRAVAG---VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL 393 ++ + + A + + E + + + Sbjct: 304 RLEQNYRSTGHILAAASGVIAGNTGRLGKTLWTDGEDGEKVRLIGHWDGDEEARWIGEEI 363 Query: 394 LAMLEEDPTLTP---RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 AM + + P I ++V + F LPY + Sbjct: 364 EAMGKGTRGMEPIGPNSIAILVR-----ASHQMRAFEDRFLTIGLPYRVIGGPRFYERME 418 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 + ++ + S +++ P + + ++ + +++ +G+ Sbjct: 419 IRDAMAYFRVVVSPDDDLAFERIVNTP----KRGLGDKAQQTIQRMARSNGVSLLEGARL 474 Query: 511 ----VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 T GL R + L +++ + H+ Sbjct: 475 CVETQAIGGKGGRELRTLVDGLARWRIQLTGALRAAGPSDDLIEEDADPSEVPKISHI-- 532 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 E + D + + + ++ Sbjct: 533 -------------------ELAEIILDESGYTSHWQNDKTPEGPGRLENLKELVKALENF 573 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 + L + ++ +D E+ Q V + TL + + F V L G DG++P Sbjct: 574 E-----NLQGFLEHVSLIMDNEQDDQEP---KVTLMTLHAAKGLEFPAVFLPGWEDGLFP 625 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFP 744 Q + ++ +++R L + A++ IS+ G + P Sbjct: 626 SQRSMD----------ESGQAGLEEERRLAYVGITRAEEVCTISFAGNRRVYGQWQSQMP 675 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 S + EL + + PG S + + S Sbjct: 676 SRFIDELPEDHVEVLTPPGLYGHQGSVSATASP--VEREMAGSNLHEKAASADVYNSPGW 733 Query: 805 EWLPAASQAGKAHSEFVQPLPFTLPETV 832 L A E + Sbjct: 734 RRLQARQGQYGTRQPSEAKAMTIDAEAI 761 >UniRef50_C7QGW9 ATP-dependent DNA helicase PcrA n=8 Tax=Bacteria RepID=C7QGW9_CATAD Length = 806 Score = 237 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 76/603 (12%), Positives = 157/603 (26%), Gaps = 109/603 (18%) Query: 213 ICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIK----------DPAYLAKLLT 262 + + +A + L + ++ + D P Sbjct: 208 VDHDTFSSRAQTEAERQLAQVYRLYADRLTAAKALDFDDIIMTTVHLLQAFPMIAEHYRR 267 Query: 263 RQRRHSFEDRELPLFRDSENAGQLFN----------------------SDGEQDVGNPLL 300 R R ++ + + +L VG+ Sbjct: 268 RFRNILVDEYQDTNTAQYQLVKELVGQHEKRTVDGDLVRPGLNTEDLPPAELCVVGDADQ 327 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF-- 358 + + G ++ F PD + ++ + + A + E Sbjct: 328 SIYAFRGATIRNIIE----------FERDYPDAKVIKLEQNYRSTQTILTAANAVIENNK 377 Query: 359 -SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 R+ N IT +V E + + + + + + T + V Sbjct: 378 GRRAKNLWTDSGDGKLITGYVADDEHSEAQFVAEEIDRL-SDAKETTYGGVAVFYRTNAQ 436 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 VF LPY + + ++ L + V +L+ P Sbjct: 437 -----SRVFEEVFVRVGLPYRVVGGVRFYERKEVRDALAYLRALANEDDIVSVRRVLNTP 491 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + L + Sbjct: 492 -------------------------------------------KRGIGEKAEESLERLSA 508 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 ++ DE+ GL A V + ++ R A+ P + Sbjct: 509 RERITFGDALRRADEAPGLAARSVKAVQGFTQMMDELREMAAEYGPAHVLEAILERTGLL 568 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 L D++ T IE + + Q L + +A D ++I Sbjct: 569 QELQDSDDPQDETRIENLRELLAVALEFEQGQPEGRLPEFLERVALVADSDQIPDGEDHE 628 Query: 658 P-VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 V + TL + + F VV L GM DGV+P + GD+ +++R L Sbjct: 629 GMVTLMTLHSAKGLEFPVVFLTGMEDGVFPHMRSM------------GDKKEMEEERRLA 676 Query: 717 LEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 + A+++LY+S + + PS + E+ + + + + Sbjct: 677 YVGITRAREQLYVSRSVYRSAWGAPQYNPPSKFLGEIPEPLVEWERTAPEPKTGERSPFG 736 Query: 775 RVK 777 + Sbjct: 737 DRR 739 >UniRef50_A8SJB4 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SJB4_9FIRM Length = 1152 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 129/1073 (12%), Positives = 307/1073 (28%), Gaps = 174/1073 (16%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTG---MAQWLQMTLSQKFGI--AANID 61 ++R D + L +RE +P ILV M + L L + I I Sbjct: 12 ADRTDKILDLCFEEAKREDK----KPIYILVPEKFTYEMEKRLSEKLEDEKNIDPNFRIR 67 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 ++ +F V + +L T LL + ++ L Sbjct: 68 VVSFSTLSKIVFTNVGGLKER-----------RLTTSARSLLTFKAMDMVSKDLITFKSD 116 Query: 122 RKLFQLSSKAADL---FDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQ 178 + D+ F Q D + E E L ++K+ + Sbjct: 117 DFKMGFVNNIMDMIIEFKQNDFSVSDVFSLTENVKN-ESLKFKMQDLYNIYKSYENLIEK 175 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 N++ + + ES + +F+ P ++ L Sbjct: 176 KYFDTEDTLNIFAQKLGDFESIK------GATIFVDEYMDFTPAQYLVIEKL------IY 223 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 N D K+ + R Sbjct: 224 FSKNIYFSLLTDFKNLHSKMNMFLRSNSTIL----------------------------- 254 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 + + + + + E+ + +E+ Sbjct: 255 ----------NIKNICEKY----NIPLLEN------ISLSNESYYNSEDLS----FLEKN 290 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 S + + +I + EV + + + +++ DI + + +D Y Sbjct: 291 IGSFSPKVYFKDSENIRILKFKNIYDEVSFIAEEISKLVKI-KGYRYNDITLCMRSLDEY 349 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 S I+ VF + Y + ++ + +P++ +S+L + D + + V L + Sbjct: 350 SYIIERVFDDY----NIDYFLDEKISIMENPIIILILSILDMKDKNYSYDSVFRYLKSGL 405 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 +++E + L +V +GI+ + + + + Sbjct: 406 TG----VSDEDIFLLENYVIANGIKGNRW--------FDESWNKSIVHSVEEESDDEKLV 453 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 V+ ++ + + + L + + + + ++ N + Sbjct: 454 KINEIKNIVISPIKNLHEKLKGRNTVKDICKYLYEFTLEIGLFDRINNLVMNFQNEGNLY 513 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-G 657 + + + A++ E + + + S + + L+ + + Sbjct: 514 ------KAKEYSQVWGSFTAVLDEMVEFMGEEKIAYSKFINLIKTELENIELGIVPPSKD 567 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR---------GDRSR 708 V I T+ M+ K+ +LG+NDG +P+ + ++K + + Sbjct: 568 EVFITTVDRMKKPSTKIAFVLGVNDGNFPKNIVDNDLISENEKESLKTMGFNFSNNNLLK 627 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI-----------DYIGQ 757 D+++L + A++KLYI++ S + S V+++ DY+ Sbjct: 628 TTDEQFLSYKTFSIAKEKLYITFP-ISDLEGKSLLVSRFVKKIKFIFENLEVESIDYLKD 686 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRM--PFDPQNYQ-------PGERQSYAREWLP 808 + E + + + +++ L++ D N++ + Y E L Sbjct: 687 FSIMDIFETFSKERLYQILVSNIEALNSNKLSENDKFNFREIIDFLIEDKDYKYKIEILK 746 Query: 809 AASQAGKAHSEFVQPLPFTLPE-TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-D 866 K F V + L+ F P F L+ R P D Sbjct: 747 DKLNYKKETENIKDYTSFLYESGNVSISKLENFMRCPFSYFINYGLRAKEREVYDFSPAD 806 Query: 867 TEPFILEGLSRY-------QINQQLLNALVEQDDAERLFRRFRAAGDL------PYGAFG 913 + + + I+ +++ Q + E+L ++ + Y F Sbjct: 807 YGTYCHKIFDDFFKGIFENNIDWNIIDREFIQREVEKLTKKMAEKSNFILESSPKYKYFS 866 Query: 914 EIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN-------------GVQITGWLPQVQ 960 I + + ++ +A++V E + +++ G + ++ Sbjct: 867 TITQKNIVESIEIMAEQVRRGNFVPTGFETEFGDESIKPITYTLKNGKEIKLVGKIDRID 926 Query: 961 P---DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPP 1010 + R ++ + L + E P Sbjct: 927 VFKGENFDFLRIIDYKSSKRDIDLNQVYAGLQLQLFVYMNAILSSNKERYKPA 979 >UniRef50_Q0AHY9 ATP-dependent DNA helicase UvrD n=16 Tax=Betaproteobacteria RepID=Q0AHY9_NITEC Length = 748 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 67/610 (10%), Positives = 162/610 (26%), Gaps = 86/610 (14%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 A Q + K +++ + R Q FI + + +R + Sbjct: 113 DMADQLAVIKRILKERSLDEKVLAPR--QLQWFINNAKEEGLRASQVDTRGS---FNRTL 167 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 Q +A+ R Y ++ R ++ + Sbjct: 168 AECYQVYEAVSMRGGTVDFAELLLRCYELLSRNEILRDHYRGRFEHILVDEFQDTNRLQY 227 Query: 281 ENAGQLFN-----SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLL 335 + L VG+ + + G + + Sbjct: 228 QWIKLLAGSGSQQHAAIFAVGDDDQSIYAFRGAHVGNM----------RDLEKDFSVPKI 277 Query: 336 HNIQSDILELENRAVAGVNIEEFSRS---DNKRPLDPLDSSITFHVCHSPQREVEVLHDR 392 ++ + N A + E ++ N S+ + + E + D Sbjct: 278 IRLEQNYRSQGNILDAANALIENNKGRLGKNLWTAAGKGESVRIYYAATDVDETSFIVDE 337 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 + A+ L+ +I ++ V + + Y + ++ Sbjct: 338 IKALHA--EGLSLSEIALLYRSNAQ-----SRVLEHGLFNASISYRVYGGMRFFDRQEVK 390 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 ++ L L S +L +++ P I L L+ G Sbjct: 391 HALAYLRLVASPDDDNALLRVINFPP----RGIGARTLEQLQDQAEILGTS--------- 437 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 W+ L + + +L++ + Sbjct: 438 ----------LWQAALK-------------VCEGRKAVTTRGDQPGRGIAGFVNLVLSMQ 474 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 G + + ++ + + +++ A + A+ Sbjct: 475 QACEGQPLPEIIRRVVDQ-SGLVAHYQAEREGNNERLENLKELVNAATSFVHEAEDD--- 530 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L+ L+ V + T+ + + F V + G+ +G++P + + Sbjct: 531 SLTAFLAH--ASLEGGEHQAEGYQDAVQLMTVHAAKGLEFHSVFISGLEEGLFPHENSRN 588 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQE 750 + + +++R L A+ A+Q+LY+SY + R PS V E Sbjct: 589 ------------EPNGLEEERRLMYVAMTRARQRLYLSYAESRMLHGQVRVNVPSRFVDE 636 Query: 751 LIDYIGQSHY 760 + + + + Sbjct: 637 IPEELLKRLR 646 >UniRef50_B5YF03 ATP-dependent DNA helicase PcrA n=2 Tax=Dictyoglomus RepID=B5YF03_DICT6 Length = 625 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 68/602 (11%), Positives = 169/602 (28%), Gaps = 100/602 (16%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 + Q L + + L + + + A + I L+ P S + ++ Sbjct: 113 DENDQEDL---IKDILKDLNRAKDYNARDIKEKISRLKDQLITPQEFSSLIS----NSFD 165 Query: 221 PVYLQALQAL-GKHIEIHLLFTNPCRYYWGDIKDPAYLA--KLLTRQRRHSFEDRELPLF 277 + L+ + + + L Y + L + ++ + Sbjct: 166 EIVLEVYKRYEKELRRNNALDFADLLLYSIRLLQEKPAICGFLQDKIEYVLVDEYQDTNK 225 Query: 278 RDSENAGQLFNSDGEQ-DVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 E + + VG+ + + G DY + + + Sbjct: 226 AQYELFKIIVLDKQKFSVVGDDDQSIYSFRGADYQNIFR----------LEKDFKNLRVI 275 Query: 337 NIQSDILELENRA-VAGVNIEEFSRSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRL 393 + + + +A V I + K + + E + ++ Sbjct: 276 FLTKNYRSTQQILEIANVLIANNDKRYPKELWSDKKDGTYPVLFRALNEEDEANFVARQI 335 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 LE +I V+ F A +PY + + ++ Sbjct: 336 K--LEVAKGRRWSEIAVLYRTNRQ-----SRSFEEALIRNNIPYKVIGGMSFFDRKEVKD 388 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 ++ L++ + + +++VP R I + +R++ Sbjct: 389 IVAYLNVIYNPNDIVSMKRIINVP----RRGIGDATFNMIREYY---------------- 428 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 ++V + + +L Sbjct: 429 ------------------------NKGYSLLEAVKEVSKIKKEVKSFY--------ELWT 456 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 + L L + + + N + + + + + ++ Sbjct: 457 YLLVLKDSLTLRDLISTIINKTNYLSEFENQEKKELENRMENLMELMDFADNFSGKAQDT 516 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L L+ L ++ G V++ TL ++ + F+VV L+GM +G+ P Sbjct: 517 LGEFLTHLS--LTNSKLESTLEEGKVSLITLHSVKGLEFEVVFLVGMEEGILPHYN---- 570 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 + ++R L + A++KLY+SY + + + PS ++E+ Sbjct: 571 ---------ATTKEEIQEERRLCYVGITRAKEKLYLSYAAKR--YSRYQEPSRFLEEIYH 619 Query: 754 YI 755 + Sbjct: 620 LL 621 >UniRef50_Q9CD72 ATP-dependent DNA helicase pcrA n=26 Tax=Actinomycetales RepID=PCRA_MYCLE Length = 778 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 75/539 (13%), Positives = 153/539 (28%), Gaps = 72/539 (13%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-----------SDGEQDVGNPLLAS 302 P R R ++ + +L VG+ + Sbjct: 221 PQIAEHYRRRFRHVLVDEYQDTNHAQYVLVRELVGHGARNSPDDMPPGELCVVGDADQSI 280 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFS 359 + G ++ F PD ++ + +N A ++ Sbjct: 281 YAFRGSTISN----------IEDFERDYPDTTTILLEQNYRSTQNILSAANSVIARNFGR 330 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 R I +V + E + + D + A++ +T D+ V+ + Sbjct: 331 RDKRLWTDAGKGELIVGYVSDNEHDEAKFIADEIDALVGGGE-ITYDDVAVLYR-----A 384 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + +PY + + I+ L + D+ + + +L+ P Sbjct: 385 NNLSRSLEEVFIPTGIPYKVVGGFCFYESKEIRDLIAYLRVLDNPGDAVSMRRILNTP-- 442 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT--WRFGLTRMLLGYAM 537 R I + + + +G + V E ++P + G +L Sbjct: 443 --RRGIGDRAEACVSVYAENTGTSFADALQAVAEGKVPMLNTRSVKAIAGFVALLDDLRC 500 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + V E SG + R L +E + D LN Sbjct: 501 RVDDDLGELVESVLERSG------------------YLRELESSTDPQELARL--DNLNE 540 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 E + D L+ ++++ D ++I +G Sbjct: 541 LVSFAHEFSTE-QANAAALAKSLHTPEDEDVPDTGALAAFLEKVSLMSDTDQIP-ENNSG 598 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V + TL + + F VV + G DG+ P GD + ++R L Sbjct: 599 VVTLMTLHAAKGLEFPVVFVTGWEDGMLPHMRT------------LGDPTELSEERRLAY 646 Query: 718 EALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 + A+Q+LY+S S ++E+ + ++ + S A Sbjct: 647 VGITRARQRLYLSRAITRSSWGQPILNPESRFLREIPPELIDWRRSILTDSYSTPASGA 705 >UniRef50_A8SMG4 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMG4_9FIRM Length = 750 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 57/542 (10%), Positives = 151/542 (27%), Gaps = 82/542 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIY 312 P L + + ++ + E L + VG+ + +G G + Sbjct: 205 PEVLDYYSEKFKYIYVDEYQDTNDAQYEIIKLLASKYKNVCAVGDIDQSIYGWRGANISN 264 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDP 369 +L+ F + P++ + ++ + + A + + N Sbjct: 265 ILN----------FENDFPNSKIILLEENYRSTQKILDCANELIKNNVNRKEKNLWTKKE 314 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 I + + E + + ++ DI V+ + F +A Sbjct: 315 GGDEIIYKSYQNENYEAIEVAQNVSNLIF--EGYNLSDIAVLYR-----ANFQSFAIENA 367 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + Y + ++ ++ L L + +++ P Sbjct: 368 LRKNSIAYRMVGGLKFYDRKEIKDILAYLKLIANPKDDNAFRRIINYP------------ 415 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + + + L Y + + Sbjct: 416 -------------------------------KRSIGNVSLQKLEEYCYSENISLFDGLFR 444 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + + +L + + + + +E + D + + Sbjct: 445 NEFLDSVSKKLRTEFENFRDMIFGFITCVEDTE-VEILIKELLDSIKFVDYLRENEKKEF 503 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + + E + G + L + L + V + T+ + Sbjct: 504 EKKAENINLFLEEISNSYKG--IKLLEYLE--TNSLLSDIDKTEDSDDTVTLTTIHSAKG 559 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + +KVV ++GM++G++P ++ + +++R LF A+ A++KL+I Sbjct: 560 LEYKVVFIIGMDEGIFPS-----------ERSIKERDDGLEEERRLFYVAITRAKEKLFI 608 Query: 730 SYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 S S V E+I+Y+ + ++++ ++R Sbjct: 609 SSTKSMTMYGKLNLYRVSSFVDEIINYVDDKSINLEFNFDEERVTTSKIRNDAYTDYSRT 668 Query: 788 PF 789 Sbjct: 669 YV 670 >UniRef50_Q0AZZ6 ATP-dependent DNA helicase PcrA n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZZ6_SYNWW Length = 696 Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 68/510 (13%), Positives = 147/510 (28%), Gaps = 81/510 (15%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDY 310 ++P L K + ++ + + A L + VG+P + + G + Sbjct: 199 QNPDVLEKYQGWFQYIMVDEYQDTNYSQYFWARLLASRHHNIFVVGDPDQSIYSWRGAEP 258 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPL 367 + F+ PD+ L ++ + N A + E Sbjct: 259 YN----------IKRFLGDYPDSRLIKLEMNYRSSGNILSAANAVICNNEEREEKQLYTQ 308 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + +E + D + +L +D V Sbjct: 309 KGQGEKLVHFCAGDSFQEARFIADEINQLL-RSENRHFQDFAVFYRTHAQ-----SRALE 362 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A R +PY I R ++ ++ L L + +++VP R I E Sbjct: 363 EALLYRNIPYHIVGARKFYERKEIKDILAYLRLVSNNNDLLSFERVINVP----RRGIGE 418 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + L ++ + E GI + Sbjct: 419 KTLGRIKAYSEERGI---------------------------------------SLLDVL 439 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + G+ +++ + L + L E L ++ Sbjct: 440 AEAESIPGIGRKMLTAMEDFYGMLKYLTDLVTSGASLMELLEQVIEVTGYIEELKKSKAT 499 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + Q + + + + L + A + + + + V + TL Sbjct: 500 DAEARIENLQELRSLVVEFEREGGQGLEEFLSQTALVQESDELD---NSDHVLLMTLHGA 556 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F VV + G+ +GV+P + +++R L + AQ++L Sbjct: 557 KGLEFPVVFITGLEEGVFPSYRSQT-------------AEEMEEERRLCYVGITRAQERL 603 Query: 728 YISYIGRSIQDNSER--FPSVLVQELIDYI 755 Y+S+ + ER PS + E+ + + Sbjct: 604 YLSHALSRLLYGYERSNPPSRFLYEIPEEL 633 >UniRef50_Q4L4Y2 ATP-dependent helicase/deoxyribonuclease subunit B n=65 Tax=Staphylococcus RepID=ADDB_STAHJ Length = 1162 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 119/1080 (11%), Positives = 272/1080 (25%), Gaps = 201/1080 (18%) Query: 16 LMEFIVERERLDDPFEPEMILV-QSTGMAQWLQMTLS--QKFGIAANIDFPLPASFIWDM 72 M ++++ +DP ++L+ + Q L+ ++ + + + + Sbjct: 17 HMIDNIKQQMKEDPLGDPIVLIAPTQSTFQ-LEQAFVNDKELNGSLRTEVLHFERLSYRV 75 Query: 73 FVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQ------ 126 F V + +L + ++ + + KL+Q Sbjct: 76 FQEVGGLTEE------------------RLTQAATEMMIYDLVQQHKSELKLYQSQVNYY 117 Query: 127 -----LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 LS + D F +Y V + L + Sbjct: 118 GFSEKLSEQIQD-FKKYSVTPEHLHTFLQDNDLKTRTRHKLEDISL-------------- 162 Query: 182 PRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 +YQ F E + Sbjct: 163 -------IYQYFEERINGEFITSED----------------------------------- 180 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-----GEQDVG 296 ++ DI + K + + + L S G Sbjct: 181 --SLNHFIDILSQSEWIKRA----EVYIDGFHNFSTLEYQIIKALVQSAKKVTVLLTTDG 234 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 N S + + + L ++ ++ +Q + + R I+ Sbjct: 235 NEDPFSLFRKPSEVLTHLKEIAKDLNIE-------------LQQQFFKQQYRFNNKDLIQ 281 Query: 357 EFSRSDNKRPLD-PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 + D + D SI S + EV + +++ D +DI ++ D Sbjct: 282 LEQQFDALQINPIAYDGSINILESSSIREEVNEVARQIIK-DTRDKQYRYQDIAILYRDE 340 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 +F S +P+ I +R+ HP++E SLL + + + ++ L+ Sbjct: 341 A-----YAYLFDSVLPQYDIPFNIDTKRSMTHHPIMEMVRSLLEVIQTNWNISPMMRLIK 395 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL---TRML 532 +L F + + L +V E G+ D T L R Sbjct: 396 TNILTNHFKDSAYLIDLLENFVVERGVYGKRWLDEKLFSIDNFTKMGRKEHKLTTEERED 455 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 + +L ++++ ++ + L Sbjct: 456 FEQVVHLKNDIIDKILTFEKAMNEAE----NVRGFATAFYETMEAFDLPKYLMTHRDQLD 511 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 E + I I+ + + + + L + L+Q Sbjct: 512 ------VDGRHEEAEEIDQIWNGLIQILDDLVTVFDNEEMTLKRFLEVFDIGLEQLEFVM 565 Query: 653 RFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD- 710 V+I T+ + K + ++GMNDG P+ ++ +K +++ + Sbjct: 566 IPQTLDQVSIGTMDLAKVDNKKHIYMVGMNDGAMPQPVSSSSLITDEEKKVFEQQAQVEL 625 Query: 711 ---------DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG----- 756 D+ ++ A+ +++ SY ++ S + ++ Sbjct: 626 SPTSDILQMDEAFVCYIAMTRGSEQVTFSYSLM-GAQGEDKEKSPFIDQIQGLFNGLEVM 684 Query: 757 ----QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 Q + P + +++ + L + + Sbjct: 685 NIHYQHNAQPLSLMEHPHQTKVVLFESLKAWLEAEMVADVWVDAYQVMRDNDKLNNGLEY 744 Query: 813 AGKAHSEFVQPLPFTLPETVPL---------ETLQRFWAHPVRAFFQMRLQVNFRTEDS- 862 A + + + P L + + P + + L++N RT+ Sbjct: 745 LLTALTYDNETVKLDEPLAASLYGSTINASVSRFEGYNDCPFKHYANHGLRLNERTKYKL 804 Query: 863 EIPDTEPFILEGL---------SRYQI----NQQLLNALVEQDDAERLFRRFRAAGDLPY 909 E D L + L +E + + + Y Sbjct: 805 ENFDLGNIFHTALKYISDKVDGDFKNLDNKKIHALTVEALENVLPQ--VQFNLMDSNAYY 862 Query: 910 GAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL------------------ACNGVQ 951 + ++ L + + Q E V Sbjct: 863 RYVSKRIGVIVESTLKALRYQNKNTKFKPQRFEAGFRKTPNNSEELIAQPLITKQGIPVN 922 Query: 952 ITGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRF 1008 I G + ++ D + VY + + + R Sbjct: 923 IRGQIDRIDAYTKDDKSYINIIDYKSSNPSAKLDLKKVYYGKQMQMMTYMDIALQNAQRL 982 >UniRef50_B1GYW6 ATP-dependent UvrD family DNA helicase PcrA n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYW6_UNCTG Length = 772 Score = 235 bits (598), Expect = 8e-60, Method: Composition-based stats. Identities = 83/672 (12%), Positives = 184/672 (27%), Gaps = 91/672 (13%) Query: 186 RANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCR 245 A+ R + L+ + S GI+ + Q + + R Sbjct: 140 IADKISRAKDNLKFPSDMAAEAESAGDFFGITV--AKIYELYQKKLERADAMDFGDLIMR 197 Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWG 304 + L + + ++ + L VG+ + + Sbjct: 198 TVSALQRHSELLEYYREKYKYIMVDEYQDTNHAQYIFIKLLAGKYHNVCVVGDDDQSVYS 257 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRS 361 G D +L F P+ ++ + + S Sbjct: 258 WRGADINNILD----------FEKDYPNAKSVKLEQNYRSTPKILSTANQVVKYNNARIS 307 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 +P + S+T + E + + + + ++ D V Sbjct: 308 KRLWTQNPDNGSVTVLKAVNENDEAVKIAELIYSNAYDNK-CKFSDYAVFYRTNAQ---- 362 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 F +PYAI ++ I+ L L + + ++++P Sbjct: 363 -SRTFEDTFRLSRIPYAIVGTLRFYDRAEIKDVIAYLKLIYNPNDNVSFKRVINIP---- 417 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 R I + + L +A Sbjct: 418 RRGIGKTSIETLEN---------------------------------------FAQLKNM 438 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 WQSV P+ + +GL L S + + L ++ + Sbjct: 439 SIWQSV-PFAQEAGLTKGPAEALNSFAQFIKDF-STLKNSGSVKLIVEKVITDSEYLKEL 496 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP--LSLLRDELAQRLDQERISQRFLAGPV 659 +AE + + Q +I+ + ++ L+ ++ L + S G V Sbjct: 497 EAENTPESKIKIENIQELISAVDDFEKNRSLDKSLAGYLTQI--ALMNDADSPDESKGKV 554 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 + TL + + F V + G+ +G++P + D+ +++R L Sbjct: 555 TLMTLHLAKGLEFDNVFICGLEEGLFPMGES-----------AFNDKE-LEEERRLMYVG 602 Query: 720 LISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 + A++ LY+ + PS + E ++ Sbjct: 603 MTRARKCLYLCWSTERKVYGKIIWNMPSRFIAE--AGFKDESAEMEQNRKQNFQNRLSQG 660 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE----FVQPLPFTLPETVP 833 + T +H+ QN++ ++S+ E + + + S E + Sbjct: 661 FNRTIIHSDSFGREQNFRSFNKKSFKAEIVYTNAGSYGYMSSGGEITKAERFDNPAEDLS 720 Query: 834 LETLQRFWAHPV 845 + +HPV Sbjct: 721 PYKIGTAVSHPV 732 >UniRef50_C1XMD9 ATP-dependent DNA helicase, Rep family n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XMD9_MEIRU Length = 706 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 66/539 (12%), Positives = 145/539 (26%), Gaps = 89/539 (16%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIY 312 P L K+ R R ++ + + L VG+P + +G D Sbjct: 204 PEVLHKVQQRARFIHVDEYQDTNPVQYKLTRLLAGERPNLMVVGDPDQSIYGFRSADINN 263 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILE---LENRAVAGVNIEEFSRSDNKRPLDP 369 +L F P + ++ + + A A + RP P Sbjct: 264 ILD----------FTKDYPGARVIRLEENYRSSSSILRVANAVIEKNALRLEKVLRPTRP 313 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + + + + E + ++ + + I V+ + Sbjct: 314 GGEPVRLYRAPNAREEAAFVAREIVKL------GNFQQIAVLYRTNAQ-----SRLLEEH 362 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +P + ++ ++ + + S ++ +++ P I Sbjct: 363 LRRANVPVRLVGAVGFFERREIKDLLAYGRVAVNPADSINLRRIVNTPP----RGIGATT 418 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + L + ++G ++ + L ++ +Q VL Sbjct: 419 VSRLVEHAQKTGTTVFEAFRVAEQVISRPQQVQAFVRLLDELIEAAFESGPTAFFQRVLE 478 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 +R L Q E Sbjct: 479 QTG---------------------FREALKQ-------------------------EPDG 492 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 Q + ++ + + LS D +A E A V + TL + Sbjct: 493 EDRLQNVEELLRAAQDWEEEEGGSLSDFLDSVALTAKAEEPQGDAPAEAVTLMTLHNAKG 552 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V L+G+ + + P + + +++R LF + AQ++LY+ Sbjct: 553 LEFPTVFLVGLEENLLPHRNSLHRL------------EDLEEERRLFYVGITRAQERLYL 600 Query: 730 SYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 SY PS ++++ + + GD + T L Sbjct: 601 SYAEERETYGKREYTRPSRFLEDIPQDLLKEVGAFGDSEVRVLPQARPEPKPRTQLAEF 659 >UniRef50_Q1DAU6 ATP-dependent DNA helicase, UvrD/REP family n=6 Tax=Cystobacterineae RepID=Q1DAU6_MYXXD Length = 691 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 58/561 (10%), Positives = 149/561 (26%), Gaps = 81/561 (14%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIY 312 P K R R ++ + E L S VG+ + G + Sbjct: 203 PDLYEKYTKRFRYLLVDEFQDTNTAQLELLKLLAGRSRNVCAVGDDDQCIYSWRGAEVRN 262 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLDP 369 +L F + P ++ + ++ + A A + ++ Sbjct: 263 ILD----------FDRLFPGGKEVRLEQNYRSVQTVLDAANAVIAKNPERKAKQMWTDRT 312 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + + C + + E + + + ++ DI V+ P Sbjct: 313 GGTKVKVVTCPNDEEEARFVAHEIQKHMAL--GISADDIAVLYRTNGQSRPI-----EET 365 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 ++ + Y + ++ I+ + ++ +L +++VP I + Sbjct: 366 LREKNIGYEVVGGSEFFDRREVKDVIAYFKVIVNKLDEISLLRIVNVP----SRGIGDVT 421 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + L G+ W + Sbjct: 422 MERLNVHARGEGV---------------------------------------TLWTVMKK 442 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE-TEAA 608 + L + + + +R + + ++ + A Sbjct: 443 ATDYEDLPPGAGARVMDFVDLVERYRAAYEHGQLANVTRKLLEEIGFREATRAHATSATA 502 Query: 609 MTLIEQQWQAIIAEGLGAQYGD--AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + ++ + + L + L+ QE V + T+ Sbjct: 503 ADKKLKGVDGVLNSLENFEKREGPKASLPTYLNRLSLDTRQEEEEVPGANRRVTLMTVHA 562 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + +++V +GM + + P +G+ +++R L + A++ Sbjct: 563 SKGLEYRLVFFIGMEEDLMPHGGM------------QGEAQNLEEERRLCYVGITRAKEV 610 Query: 727 LYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 LY++ ++ R PS +++L + + L E A+L Sbjct: 611 LYLTRAATRVKRGKEVPRTPSRFLEDLPPEVIEVVELDAPRQGPPTTEEKNFFANLKERF 670 Query: 785 TRMPFDPQNYQPGERQSYARE 805 + A Sbjct: 671 KKPAIPGTPPGGTGPSGGAAR 691 >UniRef50_A9M0G6 ATP-dependent DNA helicase n=38 Tax=Betaproteobacteria RepID=A9M0G6_NEIM0 Length = 690 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 70/594 (11%), Positives = 166/594 (27%), Gaps = 91/594 (15%) Query: 195 ETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDP 254 + +++A+ +RV+ L L + + L + Sbjct: 168 DVVQTASNAWEQQTARVYASYQETLQSYQAVDFDDLIRLPAVLLQQNS------------ 215 Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYL 313 K R R ++ + L ++G VG+ + + G + L Sbjct: 216 EVRNKWQRRLRYLLVDECQDTNTCQFTLMKLLTGAEGMFTAVGDDDQSIYAWRGANMENL 275 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA-VAGVNIEEFSRSDNKRPLDP--L 370 + P + ++ + +A IE + K+ Sbjct: 276 RKM----------QENYPQMKVIKLEQNYRSTARILKIANKVIENNPKLFTKKLWSKLGE 325 Query: 371 DSSITFHVCHSPQREVEVLHDRL-LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + C + Q E + + ++ L D V+ +F A Sbjct: 326 GEPVKVVACQNEQHEADWVVSQIVKQKLIGGDKTQYADFAVLYR-----GKHQARIFEEA 380 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY +S ++ ++ +S + L + L + P + I + Sbjct: 381 LRGARIPYRLSGGQSFFDKAEIKDVLSYVRLLANPNDDPAFLRAVTTP----KRGIGDVT 436 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L L + +E +++ Sbjct: 437 LGKLNTYAHEHEC---------------------------------------SLYEAAQN 457 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + + L HL + + +R E + ++ L E A Sbjct: 458 EEALATLNNTNRQHLQAFMDMFGSYRAKAETGEAGEFINSLLEEIDYENHLMQNEEGKAG 517 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + + +++ D + L + + V++ TL + Sbjct: 518 EIKWRNVSDLVSWFARKGGEDGKNIIELAQTV-ALMTLLEGKDEEETDAVSLSTLHAAKG 576 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + + V L+G +GV P + + +++R L + A+++L + Sbjct: 577 LEYPYVFLVGCEEGVLPHNDSI-------------EEGNVEEERRLMYVGITRAKRQLTL 623 Query: 730 SYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 ++ + + + + PS + E+ + G E + E R A + Sbjct: 624 THCVKRKKQGTWQFPEPSRFIDEMPQEDLKILGRKGGEPIVSKEEGRRNLADII 677 >UniRef50_B1I553 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria RepID=B1I553_DESAP Length = 718 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 79/618 (12%), Positives = 167/618 (27%), Gaps = 104/618 (16%) Query: 165 QAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYL 224 L + + + + + A+ + L+ P P +F IS + Sbjct: 98 LRILRREIEKLGYSKNFVIYDEADQQTVIKDCLKELNLEPRQHPPAMFSAAISWQKNALV 157 Query: 225 QALQ-ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAK--------------------LLTR 263 + A + + L Y ++ L R Sbjct: 158 GPAEFAGAAYDQHQELTARVYAAYQARLERNNALDFDDLLFLAVRLFREFPPVLEQYRRR 217 Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQE 322 ++ + L + VG+P +G G D +L+ Sbjct: 218 FLHLLVDEYQDTNHAQYVLVNLLAQTHRNLTVVGDPDQCIYGWRGADLRNILN------- 270 Query: 323 LDAFVDVTPDNLLHNIQSDILEL---ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVC 379 F PD + ++ + A + + + H Sbjct: 271 ---FERDYPDARVVKLEQNYRSTGRILEAANHVIRFNRHRKEKELWTARGAGEAPVLHQA 327 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 + E + + + + + RD V V +PY I Sbjct: 328 RDERAEARFVAREIRRLRAQGR--SYRDFAVFYRTHAQ-----SRVLEDELLRHGVPYTI 380 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 ++ ++ L L + + +++VP R + + L +V E Sbjct: 381 IGGVKFYDRKEIKDLLAYLKLIVNPDDDVALTRIINVP----RRGVGKASLVKFFAYVRE 436 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 S + ++ D GL A Sbjct: 437 SSV---------------------------------------ACADALREADRIRGLSAG 457 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 + + +L QL WR E + + +AE + Sbjct: 458 VREAMGALGEQLARWRER---EGGVTGLTEQVLEESGYLTALEAERTVEARTRMENLSEF 514 Query: 620 IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 ++ L+ ++LA D +R + V + TL + + F VV L G Sbjct: 515 LSVTREFDLQRGGTLAEFLNDLALYTDLDRFDGE--SSQVTLMTLHSAKGLEFPVVFLTG 572 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 M +GV+P + +++R L + A+++L+++ + Sbjct: 573 MEEGVFPHT------------RAFSEPVEMEEERRLCYVGITRARERLFLTLAESRLLYG 620 Query: 740 SER--FPSVLVQELIDYI 755 + PS ++E+ + Sbjct: 621 NVYYGVPSRFLREIPPEL 638 >UniRef50_Q03NA6 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Lactobacillus brevis ATCC 367 RepID=ADDB_LACBA Length = 1201 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 126/1122 (11%), Positives = 267/1122 (23%), Gaps = 201/1122 (17%) Query: 17 MEFIVERERLDDPFEPEMILVQSTGMAQW-------LQMTLSQKFGIAAN--IDFPLPAS 67 M + ++ P + LV + + L+ ++ + + A + Sbjct: 18 MVTALAQQVTAHPTDQSYYLVPNHIKFETEVDVLSALKEQIAPEQALFAQTQVQVFSFTR 77 Query: 68 FIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF-- 125 W + LP++ L+ + +D+ +F Sbjct: 78 LAWFFMKNE-----------------PIYQ-LPRISPAGLNMLIYQIIQTHADELTIFRG 119 Query: 126 ---------QLSSKAADLFDQYLVYRPDWLAQWETGHLVE-GLGEAQAWQAPLWKALVEY 175 QL+++ A+ F V D ++ E L +++A Sbjct: 120 EVDRPGFVSQLATQLAE-FKVGQVTAADLMSAIEQLDTTNTDLQAKLHDLMIIYEAFETQ 178 Query: 176 THQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIE 235 N ++E ++ G S L Q + L + Sbjct: 179 MMGKFVENTDLLNQLATYLEQQVDLQHA------HFYLEGFSQLSAQERQLVAILIQRSA 232 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 + N Y + Sbjct: 233 SVTVALNLDHGYPQKL-------------------------------------------- 248 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 P + L + + + + + +D+ L+ A + Sbjct: 249 --PDKTTLFFQSAKLYQQLYMVAQANRVPVL--IDQQAKTARVSADLQALDTYWQASQTL 304 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 + K I + EV + ++ ++ RD +V+ + Sbjct: 305 SPQPSAVEKPT------HIQIVQAANRYVEVSRVATQIRQLVATG-NYRYRDFLVLTRHL 357 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 D+Y I +F + +PY HP +E +L + + DV +L Sbjct: 358 DAYQTVIDPIFQ----AQAVPYFDDADIRMADHPFVELLNALFDVQRRNYRYADVFRVLK 413 Query: 476 VPVLAARFDIT--------EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 +L R + L +V ++G+ ++ G Sbjct: 414 SELLLPRDADGELMAVPAYRQALALTENFVLKNGLEGQHWWTQDKDWVYNRFAVGDG--G 471 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 + + V ++ L + L W Sbjct: 472 VQTTRDDQISAQINRIRRFVKQTLPPFFARLKVAATYTDAAAVLYQFVANAGVSERLMTW 531 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 A D + I+ E L + L Sbjct: 532 RD------QAIAAGDLTKAGQPEQTWAAFCDILDEFHTILGDLPTVLPDFQALLQAGFAG 585 Query: 648 ERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR 706 + SQ V I +++ K+ ++G P P + + R Sbjct: 586 AKFSQIPSTLDQVVISESGIVQANNRKITFIMGATADTMPDNQIPTTLLADNDRQDLSAR 645 Query: 707 ---------------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 ++ + YL A +S ++L SY S S S V + Sbjct: 646 LQQVDDGTYLRDDAATQLAGEPYLNYLAFMSGSERLIFSYPAMSDDARSGLQLSPYVARI 705 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM------------PFDPQNYQPGER 799 DY G S + + DE+ + P Sbjct: 706 KDYFGLSIDIAAANPVAEDEAILPFVGTRRTTLRHLVQASHDSQLREVPLSRSWLYVLNL 765 Query: 800 QSYAREW-------LPAASQAGKAHSEFVQPLPFTLPETVP--LETLQRFWAHPVRAFFQ 850 + L + S + + + L+ ++A+P F + Sbjct: 766 LRTDPTYGELTTKLLGSLSYRNVPTQLTPDIVTQLYGTKINTSISKLEEYYANPYAYFLK 825 Query: 851 MRLQVNFRTEDSEIPD-TEPFILEGLS------------RYQINQQLLNALVEQ-----D 892 L + R + P T F L ++ Q L + ++ Sbjct: 826 YGLNLQERDVFALSPASTGEFFHATLDGLMKLVNDQKLNLAALDDQQLREMTDEVMAKLL 885 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG--- 949 D + G + +T Q + L ++ + + E+ Sbjct: 886 DTTENPQFAILESSHRMGYIRQQLMKTMRQMAKTLQEQSKRTKLRPKRTEVQFGLGDERG 945 Query: 950 -------------VQITGWLPQVQP---DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN 993 V + G + ++ ++ + E A Sbjct: 946 LAALSFDVGKRRQVTVRGRIDRLDAVQVKDKTYLGIVDYKSSEHKFSYQEAYYGRAMQML 1005 Query: 994 GESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPL 1035 + P A + ++L + P+ Sbjct: 1006 TYLDAVKQNLPTLLDAPTAKD------AELAGAVYLHLQNPI 1041 >UniRef50_B2GM51 ATP-dependent DNA helicase UvrD1 n=10 Tax=Actinomycetales RepID=B2GM51_KOCRD Length = 818 Score = 234 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 72/551 (13%), Positives = 142/551 (25%), Gaps = 110/551 (19%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-------------GEQDVGNPLL 300 P L R R ++ + +L D VG+ Sbjct: 237 PQVLEYYRRRFRHVLVDEYQDTNHAQYALVRELVGGDSPGHTDESGIPPAELTVVGDSDQ 296 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EE 357 + + G D + F P ++ + +N A + Sbjct: 297 SIYAFRGADIRN----------ITDFERDFPAARTIMLEQNYRSTQNILSAANAVISQNA 346 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 R + + I + + E + + + + +++ + P D+ V Sbjct: 347 DRRDKKLWTAEGDGAPIVGYAAENEHEEARFIAEEIDRL-QDEHGIRPGDVAVFYRTNAQ 405 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 LPY + ++ +S L + V +++ P Sbjct: 406 -----SRSLEEILMRVGLPYKVVGGTRFYERKEIKDAMSYLRAIANPADDITVRRIVNEP 460 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 R D L ++ + R+ Sbjct: 461 ------------------------KRGIGDRAQGSIAALADREGISFSEAMHRLDEA--- 493 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + A + A L+ L +G + LE L L A Sbjct: 494 -------------PGLATRSANAIRTFAQLMDDLGELAQGASVTAVLEAVLEQ-SGYLEA 539 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA- 656 + + + A++ E L + +A D ++I R Sbjct: 540 LRTSTDPQDESRVENLAELVAVVREFEKD--RPEAGLGEFLEHVALVADADQIPSRPDTA 597 Query: 657 --------------------GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 G V + TL + + F VV L GM G++P Q + Sbjct: 598 AEGTASAQQIAQEVEEARDQGVVTLMTLHTAKGLEFPVVFLTGMEHGIFPHQRS------ 651 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDY 754 D S +++R L + A+Q+LYI+ + S + E+ + Sbjct: 652 ------FADPSSMEEERRLAYVGITRARQRLYITRAESRSLWGQSQFNPASPFLDEIPAH 705 Query: 755 IGQSHYLPGDE 765 + Sbjct: 706 LIDWKREGAAA 716 >UniRef50_A0RUT2 Superfamily I helicase n=1 Tax=Cenarchaeum symbiosum RepID=A0RUT2_CENSY Length = 977 Score = 234 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 102/899 (11%), Positives = 223/899 (24%), Gaps = 147/899 (16%) Query: 210 RVFICGISAL-----PPVYLQ-ALQ-----ALGKHIEIHLLFTNPCRYY----WGDIKDP 254 R + GIS P L+ L+ L ++ + R + D+ Sbjct: 136 RKIMEGISGFKRELVTPGELEKYLEGEENGELKDLCSVYQRYQGHLREMGIIDFDDMVSE 195 Query: 255 AYLAKLLT---------RQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGK 305 A R ++ + + E + + VG+ + +G Sbjct: 196 AVRLFRARDDVRSEYGGRYSHILVDELQDANYAQLELVRLIAGN--ITAVGDENQSIYGF 253 Query: 306 LGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA-VAGVNIEEFSRSDNK 364 G + + F D+T ++ ++ + A +A I Sbjct: 254 QGA----------YTSGFENFDDITGGAETISLNNNYRCTKTIAGLAAQCIANTPSGSQA 303 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE-EDPTLTPRDIIVMVADIDSYSPFIQ 423 + P S + C E + DR++ + + I V+ I Sbjct: 304 GAVHPEGSPVEIVECADEDSEAACIADRIVQIRSPGGESAGYS-IAVLTRKIAD-----G 357 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 F R +P S S ++ L + + + + +L + Sbjct: 358 KKFSDELELRGVPARYSGGDGIFSAGPARELLTYLEIARAPASAGGEIN-----LLMKKH 412 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 I E + + ++ A G Sbjct: 413 GIPEGDIAVINTEAKKA-----------------------------------AYNDIHGN 437 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 + LA L+ +L+ P + Sbjct: 438 DHVLEVIRRGGNSGVRKKAELAGLVRRLDKVITLAGSYSP-----GTLAYHIAVPLAGLF 492 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP-VNIC 662 E +A L L L + + AG V + Sbjct: 493 RNLEDGAGAEHLREACRLATEYDLLDPRGGLDGLVGYLWAANSDKNLRSDADAGGAVEVT 552 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYP----RQLAPLGFDLMSQKPKRGDR--SRRDDDRYLF 716 T+ + F V + + P + + L+ + +G ++R L Sbjct: 553 TIHKSKGREFDAVFIADAVEDRLPLKYKGRKYQVPTTLLHGRRPQGKEKDRHMQEERRLL 612 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI---DYIGQSHYLPGDEALNCDESE 773 A+ A++ L I+Y +E PS ++E+ + + ++ G A + Sbjct: 613 YVAMTRAKKNLCITYSKEYASKKTESKPSRFLEEMQFRSNPLVRTFVFAGGPAQGAGTAS 672 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL----- 828 + D A E++ + L Sbjct: 673 TVSGLQEEAMRAVSVGDHGTAVQKVTDLAALEYMKEHGGLDGFVPPAARSPSPGLGAGAG 732 Query: 829 -----PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 P + + + P+ +F + + + + + Sbjct: 733 PAKPAPLRLSSTKIGTYKKCPLMYWFAHVMTIPSPPGI------------PMVMGGVIHK 780 Query: 884 LLNALVE----QDDAERLFRRFRAAGDLPYGAFGEIF-WETQCQEMQQLADRVIACRQPG 938 +L + + + G L Y + +E +E + + + Sbjct: 781 VLEKITDAQMNGQTPDEAGALAMLEGQLKYAVYDSRTSFEQSKEEAESMISWFVKWSAGS 840 Query: 939 Q------SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ---------------G 977 + +L G + G + +V+ + Sbjct: 841 PNKPIAVEKKFELEIAGAEFRGSIDRVERTPDGGLVLIDYKTGRTKVSPGKIAEDVQLNL 900 Query: 978 MQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLL 1036 + L L + E+R + + A+ + + ++G REG P Sbjct: 901 YAEAAKKLYKELPEKAVLLYLESGETVEYRLDEASVKSAIGRIEEYVDGIREGRFDPTP 959 >UniRef50_A6DKH4 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DKH4_9BACT Length = 674 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 88/627 (14%), Positives = 175/627 (27%), Gaps = 95/627 (15%) Query: 148 QWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGL 207 ++ G+ + Q L K + + I ++ P L Sbjct: 101 AYQAGYAPDFTLAEYGDQVGLIKQGLNELGLVEDGMSQDPKAILSLISMAKAKNQVPEDL 160 Query: 208 PSR--VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQR 265 + I + Y + L AL LL KD L + + Sbjct: 161 EESSDPWEQRIGGIYRYYQEYLHALNILDFDDLLMLTVRLL----QKDEKVRQLLQDKFK 216 Query: 266 RHSFEDRELPLFRDSENAGQLFNSDG--EQDVGNPLLASWGKLGRDYIYLLSDLESSQEL 323 ++ + E L VG+ + + G + +L Sbjct: 217 YVMVDEFQDTNHIQMELLHALLPKHEPNICVVGDDDQSIYSWRGAEVANIL--------- 267 Query: 324 DAFVDVTPDNLLHNIQSDILE---LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCH 380 AF + P L ++ + + N A ++I N + C Sbjct: 268 -AFPQIFPGGKLIKLEQNYRSNNVILNAANKVISINSQRHVKNLWSAQEGGEKLKVVACG 326 Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 S +RE + + D +L + T D ++ A +PY I Sbjct: 327 SEEREAKAIADTILNKV-NGRQNTYGDCAILYRSN-----HQSRALEDAMRRGRIPYKII 380 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 + + ++ L + + L +LDVP I ++ LR+ E+ Sbjct: 381 GDTSFYERKEVRDALAFLKIIHNPRDDFSFLRVLDVPP----RGIGPRTIKTLREKAVEN 436 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 +L + Sbjct: 437 KTS----------------------------------------VYDLLRNPQFMENFGRS 456 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPV------CRDMLNAFFLPDAETEAAMTLIEQ 614 L ++ +R+ ++ PL + + L + P + E + + Sbjct: 457 SDALMKFNNRVEEFRQKFQEKVPLAGLVEQYFEGVGYIEGLGRMYKPREDAEKRYQNVLE 516 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD-QERISQRFLAGPVNICTLMPMRSIPFK 673 I EG + +PL + ++ + + R + V + T+ + + F Sbjct: 517 IIHTI--EGREKEDKRCIPLQEYLESVSLMEEYRRRQEKDEDPNAVMLLTVHASKGLEFP 574 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 V + GM ++P K ++R LF AL A+ L +++ Sbjct: 575 SVFVTGMEKNLFPH-------------EKSAGLKALAEERRLFYVALTRAKSDLILTWSK 621 Query: 734 RS--IQDNSERFPSVLVQELIDYIGQS 758 + S+R PS + EL + Sbjct: 622 MRKAGRRMSQRMPSQFLGELPKDLVDH 648 >UniRef50_P57654 ATP-dependent DNA helicase rep n=4 Tax=Buchnera aphidicola RepID=REP_BUCAI Length = 645 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 70/624 (11%), Positives = 181/624 (29%), Gaps = 88/624 (14%) Query: 146 LAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPP 205 + E + L E Q L K + + + + N + + Sbjct: 96 IDALELNNNFTLLDEK--DQILLLKKICKKEIKNNIQLLKKLNFMISYWKNKFLTPLQVQ 153 Query: 206 GLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQR 265 L + + Y L I C + + + Sbjct: 154 LLAKSSQEKDFAYVYEQYTNYLYK----ANILDFDDLICMPTLLLKNNKKIKIRWQKKIS 209 Query: 266 RHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELD 324 ++ + E L N + VG+ + + G + + Sbjct: 210 YLLVDEYQDTNNSQYELIKMLANKNSDFTLVGDDDQSIYSWRGANPQNIF---------- 259 Query: 325 AFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHS 381 P+ + ++ + A ++ + I + + Sbjct: 260 LLKKDFPNLKIIKMEHNYRSSGRILKAANSLIANNIHYLEKKLFSQLKYGNLIKVLIGKN 319 Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD 441 + E + + ++++ + + RD ++ + + A +PY IS+ Sbjct: 320 EENEAQKIVKKIISQYAK-KKIKYRDFAILYR-----GNYQSRILEKALIKENIPYNISE 373 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 + + S P ++ +S L + +R + + ++++P I + L+ L +W Sbjct: 374 KSSFFSRPEIKDLLSYLRVVINRDDNHAFMRIVNIP----SRQIGKTTLKKLEEW----- 424 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 A + +Q+ + L + Sbjct: 425 ----------------------------------ANKKHVSLFQASNNIEIKKFLNENTI 450 Query: 562 GHLASLLMQLNIW--RRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLIEQQWQ 617 + + + ++ + L +++ + L+ F + + ++ + Q Sbjct: 451 KKIKNFISKIEKFTAWSCLKPSNIIDDIVDDLEYEKWLSKFLKDPNKIKNSINNVHTLSQ 510 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 G + + L + + R + + V + TL + + F V + Sbjct: 511 WFKNMIKGDDFEKPMTLFQIVTRMTIRDILDDNIIKEQQDRVQLMTLHASKGLEFPAVFI 570 Query: 678 LGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ 737 +GM +G+ P Q + D +++R L + A+++L+ +Y + Q Sbjct: 571 IGMCEGILPNQKSI-------------DNDNIEEERRLTYVGITRAKKQLFFTYCYKRTQ 617 Query: 738 DNS--ERFPSVLVQELIDYIGQSH 759 + PS + EL + Sbjct: 618 YGQILDMLPSRFLFELPQEDLKWE 641 >UniRef50_Q2S550 ATP-dependent DNA helicase pcrA n=2 Tax=Rhodothermaceae RepID=Q2S550_SALRD Length = 786 Score = 233 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 67/530 (12%), Positives = 154/530 (29%), Gaps = 81/530 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIY 312 L K TR + ++ + A +L VG+ + + G D Sbjct: 224 EDVLEKYQTRWQYVHIDEYQDTNQAQYVLARKLSARHKNLCVVGDDAQSIYAFRGADITN 283 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR---SDNKRPLDP 369 +L+ F + PD ++ + EN +I E + + + Sbjct: 284 ILN----------FDNDYPDATTIRLERNYRSTENIIRLADSIIEENDDQIEKSLWTDNA 333 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + S + E + + R+ + D + D V+ A Sbjct: 334 EGEYVALMEALSEKDEAQKIERRVRDLHLRD-GMEYGDFAVLYRTNAQ-----SRAIEEA 387 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY + + ++ ++ L L + + + +++ P I ++ Sbjct: 388 LRKENVPYRVIGGTSFYERKEIKDVLAYLKLLVNPNDTASLQRVINYP----TRGIGDKT 443 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L+++ + + WQ+V Sbjct: 444 QARLQRYAQQH---------------------------------------SLSLWQAVER 464 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQER-PLEEWLPVCRDMLNAFFLPDAETEAA 608 +E L + + + P +E E Sbjct: 465 VEEIETLGTRAERAVGKFRRLIARYASKAGTGSVPADELARDLIQDAGLLSELRKEHTRE 524 Query: 609 MTLIEQQWQAIIAEGLGA-QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + Q +I+ + + +S E+A DQ+ V + TL Sbjct: 525 NLQRWENVQELISALAEYVESTEDATISTFLQEVALMTDQDEA--EEGDDKVTLMTLHAA 582 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + F VV + G+ +G++P + +++ +++R LF + A+++L Sbjct: 583 KGTEFPVVFVAGLEEGLFP------------LEQATQEKAELEEERRLFYVGVTRAEERL 630 Query: 728 YISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 Y+S+ + S ++E+ + ++ E S Sbjct: 631 YLSWARSRYRYGEQTSNTRSRFLEEVDSDVVRTEAGGELEQQTDRFSAEE 680 >UniRef50_C1ZAM6 DNA/RNA helicase, superfamily I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZAM6_PLALI Length = 845 Score = 233 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 84/664 (12%), Positives = 186/664 (28%), Gaps = 92/664 (13%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYI 311 +P L R R ++ + + L ++ G+P + +G G Sbjct: 203 NPNLRQSLDERYRFILVDEYQDTNQAQYQIVSALSQNEPNLCATGDPDQSIYGWRGAQIE 262 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAG---VNIEEFSRSDNKRPLD 368 +L F P + ++ + A + ++ + R + Sbjct: 263 NILR----------FERDFPRVKMVRLEDNFRSTPEILAAADDLIRHNTQRKAKSLRTSN 312 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 P + +E + L + + D + + + Sbjct: 313 PSGLPVEIRQYADGFQEADSLAAEIRERVASGE-RQYSDFAIFYRVNS-----LSRSIET 366 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A +P+AI+ A ++ I+ L + ++ +++ PV I + Sbjct: 367 ALGRARVPFAITGGVAFYERTEVKDLIAYLRVIENPDDRPAFRRIVNTPV----RGIGKN 422 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L +W + W +V Sbjct: 423 SQEKLDRWASARN---------------------------------------LNLWDAVH 443 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 D S GL + L L+ R P+ E L V + Sbjct: 444 QIDASIGLPKKAEYSLKLFANLLDELAR--RSHGPIAELLEVIVERTGYLQNLSGLEPEE 501 Query: 609 MTLIEQQWQAIIAEGLGAQYG--DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + + ++A + LS + + D + I AG V + TL Sbjct: 502 YANRKANVEELVASARQFDQDHVEGGSLSEFLETCSLVQDADTID--ESAGQVQLMTLHS 559 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F V L+G+ G+ P + + + GD + +++R L + A+++ Sbjct: 560 AKGLEFPCVYLVGVEHGLLPHERS----------LREGDPLQIEEERRLLFVGMTRAREE 609 Query: 727 LYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 LY+++ S + EL H D+ + + + T Sbjct: 610 LYLTWTRLRSTHGRLLSTIASQFLTELN---VARHDYSTDDDTSFGDWSPQEMRRGTSGD 666 Query: 785 TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHP 844 + + + ++S +++ +A + P Sbjct: 667 SILAQMADWGEQARKESSNPSDKATSTEDDQADLAEPGVDSQLFASSEEDTQ-------P 719 Query: 845 VRAFFQMRLQ-VNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRA 903 F L+ + S T + + +++ + E + ++L R Sbjct: 720 RATFIDRVLESAVTPEDPSGHETTASQPVTSRNSRSFSKKKAPRVPEAERIDQLKSRLMT 779 Query: 904 AGDL 907 DL Sbjct: 780 GADL 783 >UniRef50_Q8EUN0 ATP-dependent DNA helicase n=1 Tax=Mycoplasma penetrans RepID=Q8EUN0_MYCPE Length = 738 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 61/512 (11%), Positives = 150/512 (29%), Gaps = 85/512 (16%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIY 312 K R ++ + + + L + VG+P + G Sbjct: 215 EEIRTKWQNRFDYILVDEFQDTNYDQYQIIKLLSKNFKNIFAVGDPDQMIYSWRGA---- 270 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLDP 369 + F D+L ++ + + N A + + + N Sbjct: 271 ------QENIFEVFKKDFSDSLTIVLEKNYRSTKNILNIANSLIQKNKNRIKKNLYTDSS 324 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 +S I + E + + R+ ++ + +DI ++ + ++ Sbjct: 325 TESEIIYFEADDQNLESKFVCTRIKDLV-DSKKYNYKDIAILYR-----ANYLSRNIEEF 378 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 ++ +PY I ++ I+ + L + + + + P Sbjct: 379 LSNYRIPYRIFGGFKFYQRKEVKDIIAYMKLIVN-SDEVSLTRIYNTP------------ 425 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + + YA+ + + + Sbjct: 426 -------------------------------RRQISEATYFKIKNYAVLNNISTFAAFKF 454 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 DE G+ + + + R + + E + + + + + E Sbjct: 455 VDEIEGIQTRTKNAVKAFYDSMIEIREK--KYGSISEMIDDIVEKTKYYEMLKEDGEEHR 512 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD-QERISQRFLAGPVNICTLMPMR 668 T + + G + ELA E +Q+ V++ T+ + Sbjct: 513 TENIIELKNASKNFEQNNPGSNINF--YLQELALLTSNDEEENQKNKQDSVSLMTVHASK 570 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + FK+V ++ N+ ++P + + D++R + A+ A++ LY Sbjct: 571 GLEFKIVFIIQFNENIFPSIRS-------------LEEGNLDEERRIAYVAITRAKENLY 617 Query: 729 ISYIGRSIQDNS---ERFPSVLVQELIDYIGQ 757 IS + + ER PS + E+ D + + Sbjct: 618 ISCCNGTSFFGNREMEREPSRFISEIGDALIE 649 >UniRef50_D0BN23 ATP-dependent DNA helicase PcrA n=5 Tax=Firmicutes RepID=D0BN23_9LACT Length = 755 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 71/619 (11%), Positives = 172/619 (27%), Gaps = 100/619 (16%) Query: 166 APLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQ 225 L + + +Q + L+ R+ + IS L+ Sbjct: 87 RILRRDIELLGYQRSFTICDPSEQQTAMKRILKKLDIDSEKYDYRMILNRISQ-AKNDLE 145 Query: 226 ALQALGKH--IEIHLLFTNPCRYYWGDIKD--------------------PAYLAKLLTR 263 ++ K + + R Y ++ P L + Sbjct: 146 DVEEFSKKYTGYVEQIIAKCYREYQKELAKSMTLDFDDLIMLTVQLFQKHPETLQYYQQK 205 Query: 264 QRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE 322 + ++ + L VG+ + +G G D +L Sbjct: 206 FQYIHVDEYQDTNHAQYRLVTMLAKKFKNICVVGDADQSIYGWRGADMSNILE------- 258 Query: 323 LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVC 379 F + + ++ + + A ++ E + + IT++ Sbjct: 259 ---FEKDYQNAKVVLLEQNYRSTKTILQAANHVIENNFNRKVKKLWTENEEGQPITYYRA 315 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 S Q E + ++ ++L + D ++ V +P+ + Sbjct: 316 QSEQDEGRYVLSQIQSLLRD--GYHYDDFAILYRTNAQ-----SRVMEENLLKSNIPFRL 368 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 + ++ ++ L L + +++ P + I L L + + Sbjct: 369 VGGQRFFERLEIKDLLAYLRLIVNPQDDLSFRRIVNSP----KRGIGATSLDKLNDFASM 424 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 + SG A+ Sbjct: 425 HQFSLLEASSQI-------------------------------------AISPLSGKAAK 447 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 + A ++ L + L+ +E+ + L A A Q++ ++ Sbjct: 448 ALEKFAEMIEDLRKMQEFLSISEFVEQVIEK-TGYLAALEQQHTMEADARIENIQEFISV 506 Query: 620 IAEGLGAQYGDAVPLSLLRDEL-AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + + + S L L L + S V + TL + + F VV ++ Sbjct: 507 AKQFEQDRLEEESEDSPLLQFLTDLSLVSDADSDDGDGRMVTLMTLHAAKGLEFPVVFII 566 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 G+ +G++P + + +++R L + A+QKL+++ + Sbjct: 567 GLEEGIFPS-----------LRSIMENGDDVEEERRLAYVGITRAEQKLFLTNAYSRLLY 615 Query: 739 NSER--FPSVLVQELIDYI 755 + PS + E+ + + Sbjct: 616 GRTQTNRPSRFLLEIGEDL 634 >UniRef50_C7MP63 DNA/RNA helicase, superfamily I n=6 Tax=Coriobacteriaceae RepID=C7MP63_CRYCD Length = 841 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 65/624 (10%), Positives = 154/624 (24%), Gaps = 96/624 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIY 312 P L R R ++ + L VG+ + + G D Sbjct: 203 PNVLEAYQERFRYLLVDEYQDTNHAQYAITTLLAARHKNIMVVGDDDQSIYSWRGADIRN 262 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLDP 369 +L F P ++ + + A A + +S P Sbjct: 263 ILE----------FEQDYPQTRTVKLEKNYRSTATILDAANAVIAHNVNRKSKRLVPTGD 312 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 I ++ + E + + + + I + + Sbjct: 313 TGDKIHVYMASDERDEGRWIAGEIERRHTQ--GTSYNQIALFYRTNAQ-----SRMLEDM 365 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY I + ++ L+L + +++VP R I + Sbjct: 366 LLRAGVPYRIVGGTRFFDRAEIRDVMAYLTLVVNPADDMAAKRVINVP----RRGIGKTT 421 Query: 490 LRYLRQWVNESGIRWGIDDD--------------NVRELELPATGQHTWRFGLTRMLLGY 535 + + + + + + + TW L R++ Sbjct: 422 IELIDACAARNNCTFLEAAQLTIADESVRLSTRTALGQFTSLLSEAATWTGELRRIVE-- 479 Query: 536 AMESAQGEWQSVLPYDESSGLIA-ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 + G +++ L E + ++ + + Sbjct: 480 MILERSGMVRALENSGTDEDLGRVENIKEFLGVVDEFTATHDADEAHYAAPIAAASLNEE 539 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP--------------------- 633 + + A +A Sbjct: 540 AQDQEQDQQQERQQQEVQANVATASLATAEETSADTNANHSTAFLAAEEFNTEAPAGTNM 599 Query: 634 -----------------LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 L+ + +A R D + +S V + T+ + + F V Sbjct: 600 GTAADMAAPVRVLSGDSLADFIEWVALRTDLDTMSD--DGTAVTLMTVHAAKGLEFDCVF 657 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 + GM + ++P + D + +++R L A+ A+++LYI+ Sbjct: 658 VAGMEETIFPHMNSIN------------DATGVEEERRLAYVAITRARKQLYITCASNRK 705 Query: 737 QDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 + S + E+ + + L + + ++ Sbjct: 706 LFGQTQANPTSRFLAEIPAELRHTSGLGSAGFSGTGWEKRGSRRGISGSGAEAGHGRVFG 765 Query: 795 QPGERQSYAREWLPAASQAGKAHS 818 S +R+ P A+ K + Sbjct: 766 TSSASGSSSRKRTPTAAAHRKEAA 789 >UniRef50_B5K795 UvrD/REP helicase n=5 Tax=Rhodobacterales RepID=B5K795_9RHOB Length = 837 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 84/679 (12%), Positives = 179/679 (26%), Gaps = 75/679 (11%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLP---SRVFICGIS 217 Q L K L+ + + R + I+ ++ P +P S + Sbjct: 146 DTDDQLRLLKQLIRASSIDEKRWPPR--MLAGIIDGWKNKAWTPAQVPVGESSAYDDKGI 203 Query: 218 ALPPVYLQALQAL-GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL 276 L Y L+ L LL DI LA + ++ + Sbjct: 204 DLYAAYQHRLKELNACDFGDLLLHMVTIFQTHADI-----LATYQRWFKYILVDEYQDTN 258 Query: 277 FRDS-ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLL 335 VG+ + +G G + +L F P + Sbjct: 259 VAQYLWLRLLAQGHKNICCVGDDDQSIYGWRGAEVGNIL----------LFEKDFPGAHV 308 Query: 336 HNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR 392 ++ + + A ++ + + + E + + Sbjct: 309 VRLEQNYRSTGHILGAAAGVIDANKDRLGKTLFTDGEDGEKVRLIGHWDGEEEARWIGED 368 Query: 393 LLAMLEEDPTL---TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 + +M L + ++V + F LPY + Sbjct: 369 IESMQRGTRGLDAMPLNSMAILVR-----ASHQMRSFEDRFLTIGLPYRVIGGPRFYERM 423 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 + ++ L S+ +++ P + + ++ ++ ++ +G+ Sbjct: 424 EIRDAMAYFRLAVSQDDDLAFERIVNTP----KRGLGDKAVQTIQITARTNGVNLIEGAR 479 Query: 510 NVRELELP----ATGQHTWRFGLTRM---LLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 L GL R L G + + G + + D+ S + Sbjct: 480 LCVSGGLIKGRGGNALRELVQGLDRWHATLHGQSQSQSNGVTRGDMADDDESVIDDGPTV 539 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 + +N E V D E + + ++ Sbjct: 540 EVFDGASNVNHV-----------ELAEVILDECGYTAHWQNEKTPEAPGRLENLKELVKA 588 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 L + ++ +D + V I TL + + F V L G D Sbjct: 589 LENFDS-----LQGFLEHISLIMDNAK---DEEDDKVTIMTLHGAKGLEFPSVYLPGWED 640 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--S 740 G++P Q + L +++R L + A++ IS+ + Sbjct: 641 GLFPSQRSMDESGLKG----------LEEERRLAYVGITRAEKHCTISFTSSRLVYGQWQ 690 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 + PS + EL + + PG + +A+ + + Sbjct: 691 SQMPSRFIDELPEENVEVLTPPGLYGGGFGAAGMSARANPVSEGIASTLHEKMAKADVYN 750 Query: 801 SYAREWLPAASQAGKAHSE 819 S L + SQ Sbjct: 751 SPGWRRLQSRSQQRSMSQP 769 >UniRef50_A9F541 ATP-dependent DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F541_SORC5 Length = 685 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 74/563 (13%), Positives = 153/563 (27%), Gaps = 76/563 (13%) Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 P Y+ AL++ L+ W D L + R R ++ + Sbjct: 157 PRYMAALRSFQAFDFDDLICEVV--RLWQTRAD--VLERWRMRYRFVIVDEYQDTNRAQL 212 Query: 281 ENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQ 339 E L VG+ + + G D +L F + + ++ Sbjct: 213 ELLRLLCGEHRNVVVVGDDDQSIYAWRGADVRNILD----------FEEHFSGAKVVKLE 262 Query: 340 SDILELENRAVAGVNI----EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA 395 + + + + + +C P E + Sbjct: 263 HNYRSRKPILDVANAVLAKSGARRHKKSLIATRVEGDKVRSIICVDPDVEASFVATEAQR 322 Query: 396 MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 +LE P+DI V+ A SA +R +P + + ++ I Sbjct: 323 LLER-EAARPKDIAVLYRSN-----LQAAAIESALKERQIPIRMIGGQQFFERKEVKDLI 376 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 + L + + + +L+ P I + + L Sbjct: 377 AYLRVALNPGDEMCLRRILNYPA----RGIGDAAVAKLG--------------------- 411 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 YA W +V L + + LL + R Sbjct: 412 ------------------AYATAHDASLWTAVSRPHAVHELTSAAIEGCRQLLRIIEATR 453 Query: 576 RGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 + P E + + T A + ++ Sbjct: 454 ARFERGEPSAEVARALLADAGFKEDIMAGSSTANAAARRWGNIEGLLNVFARRDEKGKGD 513 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL- 692 + + L ++ + V + T+ + + F V ++G+ +G+ P Q + Sbjct: 514 RASFAEFLRLLALRQDSEEEEATDRVTLTTMHGAKGLEFPYVFVIGLEEGLMPHQRSLDE 573 Query: 693 -GFDLMSQKPKRGDR--SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVL 747 D + GD +++R LF A+ A+ +LY++ R PS Sbjct: 574 RATDAAPSGAEGGDTGGHSIEEERRLFYVAVTRARDRLYLTRAKHRGSRGKMVPRTPSRF 633 Query: 748 VQELIDYIGQSHYLPGDEALNCD 770 + E+ + + A + Sbjct: 634 MLEIPPELLEEREELAPVAPGME 656 >UniRef50_D1NAY9 UvrD/REP helicase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAY9_9BACT Length = 679 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 68/572 (11%), Positives = 158/572 (27%), Gaps = 74/572 (12%) Query: 216 ISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELP 275 A + Q L + Y + P L + + ++ + Sbjct: 167 FEATAAQLYEEYQTLLEMQNSLDFDDMLLLVYRLFTEHPDVLERYRETYQYLLIDEYQDT 226 Query: 276 LFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL 334 L VG+ + + G D +L F D P Sbjct: 227 NAAQFTIVKLLTGDRCNLCVVGDDDQSIYSWRGADISNIL----------GFPDHFPGAK 276 Query: 335 LHNIQSDILEL---ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHD 391 + ++ + N A + + + + E E + Sbjct: 277 VVKLEQNYRSTTSILNAANVVIGSNANRHEKQLWSNLGDGEPVKIVTTENGESEAEFIGS 336 Query: 392 RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVL 451 + M + P L +D ++ + + +PY + + + Sbjct: 337 MITQMKNDKPELRYQDFAILYRSN-----HLSRQLEQTLRRQQIPYRLVGGQEFFKRREI 391 Query: 452 EAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 + ++ L L + + +L +L P + ++ + L + G + Sbjct: 392 KDAVAYLKLLVNPCDDQSLLRILGTPP----RGLAQKAVDSL---------KTGRRAKHK 438 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 EL A + L A +A+ + Y E L + L ++ Sbjct: 439 PMFELLA------EEEFQKELTPKAAAAAREFAEVYAKYKERFAEPGALAWKITEFLKEI 492 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 D L + + +++ AI + Sbjct: 493 GYL------------------DGLQRIYKDLKDAMKRRENVDEFITAITQYEERQA--EP 532 Query: 632 VPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 L + LA + +++ + V + T+ + + F VV ++ M ++P Sbjct: 533 PTLEAYLENLALLEESDKVEEETGTVDAVTLMTVHASKGLEFPVVFVVAMERNIFPH--- 589 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLV 748 + + +++ LF A+ A++ LY+ +Q PS + Sbjct: 590 ----------ERALEEGSVEEELRLFYVAITRARKYLYLLRAKERMQRGITRATLPSPFL 639 Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 L D + + ++ + A++ Sbjct: 640 HLLTDEVAERTTPEELLRPASEDEVRQAFANI 671 >UniRef50_C1A3F5 ATP-dependent DNA helicase UvrD1 n=31 Tax=Bacteria RepID=C1A3F5_RHOE4 Length = 830 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 75/611 (12%), Positives = 169/611 (27%), Gaps = 66/611 (10%) Query: 171 ALVEYTHQLGQPRWHRANLYQRFI---ETLESATTCPPGLPSRVF-ICGISALPPVYLQA 226 L H +NL + E + +A P LP + + G Y Q Sbjct: 157 ELDTKRFSARLLATHISNLKNELVGPEEAVVAADQDPAELPRLIAKVYG------HYQQR 210 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 L+A L+ P R R ++ + +L Sbjct: 211 LRAANALDFDDLIGETVALLQAF----PQIAEYYRRRFRHVLVDEYQDTNHAQYMLVREL 266 Query: 287 FN----------SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 VG+ + + G ++ F PD Sbjct: 267 VGGAGESDHAVAPAELCVVGDADQSIYAFRGATIRN----------IEEFERDYPDARTI 316 Query: 337 NIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL 393 ++ + +N A ++ R I +V + E + + Sbjct: 317 LLEQNYRSTQNILSAANSVISKNTGRREKRLWTDSGEGELIVGYVADNEHDEASFVASEI 376 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 ++++ T DI V +S +PY + + Sbjct: 377 DRLVDQGET-KFADIAVFYRTNNS-----SRALEEIFIRLGVPYKVVGGVRFYERKEVRD 430 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 ++ L + + + + +L+ P R I + + I + + E Sbjct: 431 IVAYLRVLANEDDTVSLRRILNTP----RRGIGDRAEACVAVHSEHRNISFAAALRDGAE 486 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 ++ + + + + M+ + + ++ + ++ ++L + Sbjct: 487 GKVALLNTRSQKAIASFL---EMMDGLRALLPTPAADEDEPFELGDIGEVAEAVLERTGY 543 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 A P + + L + + + + D Sbjct: 544 RAELAASSDPQDGARLDNLNELVSVAREFSSDARNAAGLIDPDDE-ETAAMREGEPDPGS 602 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L+ + ++ D +++ G V + TL + + F VV + G DG +P Sbjct: 603 LAAFLERVSLVADADQLP-DSDDGVVTMMTLHTAKGLEFPVVFVTGWEDGQFPHM----- 656 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQEL 751 GD + ++R L + A+Q+LY++ S +QE+ Sbjct: 657 -------RALGDPAELSEERRLAYVGITRARQRLYLTRAIMRSAWGQPIQNPASRFIQEI 709 Query: 752 IDYIGQSHYLP 762 + + Sbjct: 710 PEDLINWRRED 720 >UniRef50_UPI0001C37867 ATP-dependent DNA helicase PcrA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37867 Length = 786 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 66/651 (10%), Positives = 178/651 (27%), Gaps = 107/651 (16%) Query: 166 APLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA-----LP 220 L + + + + + + L + + IS + Sbjct: 147 RILRSEITALGYGSDFTIYDSDDSQRMIKSVMAELDISEKQLAPKAVLGEISRAKDQMIT 206 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYY--------WGDIKD---------PAYLAKLLTR 263 P L+A ++ + + DI P L K TR Sbjct: 207 PEQLRADAGQDYRKKMVAKIYARYQEGMRTANALDFDDILTLTVELFEQFPEVLEKYRTR 266 Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQE 322 + ++ + L +S VG+ + + G + +L Sbjct: 267 YKYIMVDEYQDTNHVQFRLVSLLSDSHKNLCVVGDDDQSIYKFRGANIENIL-------- 318 Query: 323 LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVC 379 F D + ++ + + A ++ ++ + ++ Sbjct: 319 --GFEDQFAGAKVIRLEQNYRSTQTILNAANSVIGNNVGRKAKTLWTAGEQGDKVYWYKA 376 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 E + + + + T D V+ +PY + Sbjct: 377 VDETDEANFVAETIKKYHK--ETGRYADNAVLYRMNAQ-----SNAIERMLMKCGIPYRV 429 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 ++ S L+ ++ +++ P + I + L Sbjct: 430 YGGMRFFDRKEIKDVTSYLAFINNHNDMLRFKRIINEP----KRGIGDSTLA-------- 477 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 ++ + + + + +E + L A+ Sbjct: 478 -------------------------------LIEDISRDLKLSPFDVLKTCEEYAPL-AK 505 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 V L + + ++E PL+E+L + +T + Q + Sbjct: 506 KVTSLRNAYEMFEDLTQK-SEELPLDEFLDEVMEKTGYLDYL--KTLENADTKIENVQEL 562 Query: 620 IAEGLGA-QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + + + L +E+A + +R V + T+ + + + + ++ Sbjct: 563 RSSVVQYMNESEEPTLGGFLEEVALYTEADRDP--ETDDKVTLMTVHSAKGLEYDNIFVV 620 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 G++DG++P + +++R L A+ A++ LY++ + + Sbjct: 621 GLDDGIFPSSRSFDS------------EDDMEEERRLAYVAITRAKKHLYLTNASQRMLF 668 Query: 739 NSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 + S ++E+ + + H E + + + + Sbjct: 669 GQTQRNVTSRFMREIGSELIEKHDNAAAMRSKLAEEDKSMTEVHSATLQQQ 719 >UniRef50_B0RZV9 ATP-dependent DNA helicase n=2 Tax=Finegoldia magna RepID=B0RZV9_FINM2 Length = 725 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 59/610 (9%), Positives = 157/610 (25%), Gaps = 91/610 (14%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 +A Q L K ++ + + + I L++A + F +S Sbjct: 112 DRADQISLVKECLKDMGVDPKNVEIKNEI--NTISRLKNAGATEKNIDKEDFDISLSTFT 169 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 Q + K + ++P K R + ++ + Sbjct: 170 MELFQKYEHKLKRYNSLDFDDLIVKTNLLFEENPDLREKYSDRFKYVFVDEYQDTNDTQY 229 Query: 281 ENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQ 339 + L + +D VG+ + +G G + + F + + ++ Sbjct: 230 KLIKNLVSKNDNICCVGDSDQSIYGWRGANIQN----------IQNFEKDFKNAKVILLE 279 Query: 340 SDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 + + + + + N + +S E + + + Sbjct: 280 QNYRSTQPILDLANTVIKNNSLRKDKNLWTAKNEGDMPIYRRMYSDIDEADQVVQWIEQE 339 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + ++ ++ +F +P + ++ +S Sbjct: 340 RYRENP--YEEMAILYRTNAQ-----SRLFEERLNRLGIPNRVVGGLKFYDRKEIKDCVS 392 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 L + ++ + + +++ P + I + + L Q I + Sbjct: 393 YLRIVENLNDNMALNRIINEP----KRGIGKTTMDKLLQCSQNRSISMMQYIID------ 442 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 + L + + + Sbjct: 443 ----------------------------------TDLPDFSNATAKKLQEFYYLIKSFPK 468 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII-AEGLGAQYGDAVPLS 635 + E + D + T + + + Q L Sbjct: 469 DQMN---VAELMEYILDKTGYRANLEKSTNRDDKTRLENIDEYVSSLYQFVQDNPDKNLR 525 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 + L + V++ T+ + + F VV G+ +G P ++ Sbjct: 526 EYLE--TSSLMTDLDKTDDNTKGVSMMTIHAAKGLEFDVVFFTGLEEGTIPSRVD----- 578 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELID 753 +++R L A+ A++KLYI+ + + N + S ++E+ + Sbjct: 579 -----------EDVEEERRLCYVAITRARKKLYITSVQSRRRFNEFQTKAESRFIEEMEN 627 Query: 754 YIGQSHYLPG 763 Sbjct: 628 KYKDESPNKE 637 >UniRef50_A8LAX0 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria RepID=A8LAX0_FRASN Length = 851 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 81/640 (12%), Positives = 168/640 (26%), Gaps = 135/640 (21%) Query: 182 PRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGK-----HIEI 236 P+ H A I L++ R + VY Q L + ++ Sbjct: 195 PKRHTARGLAAAISALKNELVDWETARDRATNHIERTVAEVYAAYQQRLTQANALDFDDL 254 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-------- 288 + N + + P R R ++ + +L Sbjct: 255 IMTTVNLLQAF------PDVAEHYRRRFRHVLVDEYQDTNHAQYVLIRELVGRSASSADE 308 Query: 289 ----------------------------------SDGEQDVGNPLLASWGKLGRDYIYLL 314 S VG+ + + G + ++ Sbjct: 309 PAAGSGEAVYSGGSAEPDGAGWPAKAVPPSGAVPSAELCVVGDADQSIYAFRGANIRNIV 368 Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN-IEEFSRSDNKRPLDPLDSS 373 F P+ + ++ + + A I ++ KR Sbjct: 369 E----------FEQDFPNAAVILLEQNYRSTQTILSAANAVIARNAQRKPKRLWSDAGDG 418 Query: 374 ITFH--VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 V + E + + + + ++ P D+ V VF Sbjct: 419 ERIVGFVADNEHDEAAFVAEEIDRL-GDENLARPADVAVFYRTNAQ-----SRVFEEIFI 472 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 LPY + + ++ L + + + ++ +L+VP Sbjct: 473 RVGLPYRVVGGVRFYERREIRDLLAYLRVLVNPTDTVNLRRILNVP-------------- 518 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 + M+ +A +++ D Sbjct: 519 -----------------------------RRGIGDRAEAMVSAFAERERIAFSEALSRVD 549 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETEAAM 609 E G+ + + L R L PL L+ D Sbjct: 550 EVPGVATRSARSIRDFVALLEGLREQLP-AGPLAVIEATLERTGYLSELVAEDTIEAQGR 608 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP-VNICTLMPMR 668 ++ ++ E + L+ +++A D ++I + V + TL + Sbjct: 609 VENLRELVGVVQEFTERRPDGT--LAEFLEQVALVADADQIPDDDGSDGVVTLMTLHSAK 666 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F VV L G+ DGV+P GD + +++R L + A+ +LY Sbjct: 667 GLEFPVVFLTGLEDGVFPHMRT------------LGDPTGLEEERRLAYVGVTRARARLY 714 Query: 729 ISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEA 766 ++ PS + E+ D + + LP Sbjct: 715 LTRSQVRSAWGQPAYNPPSRFLGEVPDSLVEWRRLPEPAP 754 >UniRef50_Q1WRR9 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Lactobacillus salivarius RepID=ADDB_LACS1 Length = 1193 Score = 232 bits (590), Expect = 7e-59, Method: Composition-based stats. Identities = 115/1080 (10%), Positives = 267/1080 (24%), Gaps = 183/1080 (16%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMA-------QWLQMTLSQKFGIAA--NIDFPL 64 ++ + + +DP +V + +L+ + A N+ Sbjct: 15 RQVLLEQITNWQAEDPQAKIYYIVPNHNKFSAEVKVLDYLKSQ-QDNQDLFATSNVQTFS 73 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 W + + ++ + L + + L + + + + Sbjct: 74 FTRLAWYFMKDT--ATYQVNRITNAGLNMIVYRSLQEHSDE-----LTIFKGEQTQPGFI 126 Query: 125 FQLSSKAADLFDQYLVYRPDWLAQWETG------HLVEGLGEAQAWQAPLWKALVEYTHQ 178 QL S+ +L + Y D + + + L A +++ ++ T Sbjct: 127 AQLVSQLIELQQSCITY--DDIERMKENLSQQDTADSAELEAKLHDIAIIYRDFMQMTDS 184 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFIC-GISALPPVYLQALQALGKHIEIH 237 ++++ L + FI G S + L Sbjct: 185 KYLKPADILPSLTQYLQN--------EDLSNSYFIIEGFSQFTAQEQAIISVL------- 229 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 L R + + D E+ Sbjct: 230 -----------------------LQRAKEVRIDLILNRGVTDIEDLSDKQ---------- 256 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 S YLL ++ DV P L E +E Sbjct: 257 ----SLFYRSERTYYLLYQQARKAQVKILNDVYPQELRV-------ETPELQSLAKYWKE 305 Query: 358 FSRSDNKRPLDPLD-SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + D ++ + E++ + R+ M+ D +++ D++ Sbjct: 306 STDLKPINVEKIGDNHNLQVIKADTRMTEIKEIATRIKQMVAL-KDYRYADFLLLTPDLN 364 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y I+ +F +P + + HP++E +L ++ + D++ LL Sbjct: 365 KYRNIIEPIFNDY----KVPIFVDLAKKMIDHPLVELLTALFNVKARHYRYVDMMRLLKT 420 Query: 477 PVLAARFDITE-------EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 +L + + + L + + G + + FG Sbjct: 421 ELLIPKTEYGYLGIKQFRQDLDLTENLILKFGFEGSQWLRKDDWVYYRFG---SSDFGTQ 477 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 + + + + + + L + L W Sbjct: 478 TDVQEKITKQVNVIRRYIKEILPPFFKQLDEAENGKEAAQILMNFLIINGVPEQLINWRN 537 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 A D + + A++ E + + + L + Sbjct: 538 K------ALEQGDMVMADRPEQVWNLFCALMDEYVDTLGDLSFKEEDFLNLLQTGFEGAT 591 Query: 650 ISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR----- 703 Q V I + KV + G D V P ++ + Sbjct: 592 YRQVPSTLDQVIISETTATQMNDRKVTFIFGATDLVMPNRIQNTMLLTDMDRELVQGTLD 651 Query: 704 -------GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 R + ++ A ++ +++LY SY + ++ S V ++ Sbjct: 652 DEKYLSDTAEGRMAAEPFMNYLAFMTPKERLYFSYPVAGVNEDG-LRMSPYVNRIMKQFD 710 Query: 757 -------QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 L + L ++ ++L + + Q R Y + A Sbjct: 711 LPLYEANGEPTLEDKKVLKFVATKRTALSNLIGVARQAKGQKQPLPVMWRYIYQKLQEDA 770 Query: 810 ASQAGKA-------HSEFVQPLPFTLPETVP-------LETLQRFWAHPVRAFFQMRLQV 855 + +S + L E + + + F+ + F + L++ Sbjct: 771 TYRRLTRKLMAGIEYSNIPERLKTEYAEKLYGKTLNTSVSKFEEFFKNHYAFFLKYGLKL 830 Query: 856 NFRTEDSEIPD-TEPFILEGLSR--YQI--------------NQQLLNALVEQDDAERLF 898 R P T F L + + L ++ E+L Sbjct: 831 KERDVFELSPANTGEFYHMALDKLLKTLKQDKVSITDINKSQFDAYLQQVLGGM--EQLP 888 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL------------- 945 + + T Q L ++ + E+ Sbjct: 889 QFQILQSSNRMQFILKQLGATVSQMGWALHNQGQRTKMRPLETEVLFGHVGTENGLKALT 948 Query: 946 ----ACNGVQITGWLPQVQP---DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL 998 + V + G + ++ D + + + Y + L Sbjct: 949 YDLGNGHKVNVRGKIDRIDQMIIDNQRYLGIVDYKSSSHKFNYQD--AYYGLALQMLTYL 1006 >UniRef50_Q5NVY5 ATP-dependent DNA helicase n=2 Tax=Archaea RepID=Q5NVY5_9ARCH Length = 1075 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 117/855 (13%), Positives = 232/855 (27%), Gaps = 126/855 (14%) Query: 223 YLQALQALGKHIEI----HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFR 278 YL+ L+A K+ +I LL D L + ++ + + Sbjct: 219 YLKFLEAWKKYEQIKAQKLLLDYADMIRLTIDYARARGHEVLADKFDYVIVDEFQDTNRQ 278 Query: 279 DSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIYL--LSDLESSQELDAFVDVTPDNLL 335 E L + G VG+ + +G G + + D + Sbjct: 279 QYELLKILAGDGKGITVVGDVNQSIYGFRGAYPENIDTFKEEYRPATFDLTENYRST--- 335 Query: 336 HNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA 395 IL R + + + + + + + + + + Sbjct: 336 ----DSILRTAYRLIRNNYQKADDARLLQAFDHREGTRVMLLKTLNQNEQARRIVEEIDR 391 Query: 396 MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 +L + P +I V+ S P +A R +PY +S P + + Sbjct: 392 LLA--EGVAPEEIAVLFRSYSSLRPI-----EAALKQRAIPYQVSTTTGFLKRPEIRTAL 444 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 + L + S + L +L R+ ++ + L Sbjct: 445 AYLYVLASLEMPRHGADQLWYKLLQYRYGVSIRDVHLL---------------------- 482 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 + + + Q VL GL E + L+ ++ R Sbjct: 483 --------------------SAAAKRDSIQGVLTGSLPRGLSEEGRVKIRHLVDRIMELR 522 Query: 576 RGLAQERPLEEW-LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 +E P + + F ++ L + I+ D Sbjct: 523 ASTNKELPDLLLDIYELSGLSREFTHDNSSESKTSLLNLKALHDIVTGFQDLYGTDLQGF 582 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP-RQLAPLG 693 + L + D + ++ AG V + T + + + V ++ + +P + Sbjct: 583 IEYVELLDEIGDDGELPRQEKAGGVVLKTCHGAKGLEYSHVFVVDLAKDKFPLSRGGREP 642 Query: 694 FDLMSQKPKRGD------------------RSRRDDDRYLFLEALISAQQKLYISYIGRS 735 + D + ++R L A A+ +LY+ Y Sbjct: 643 LVPDQLNDRYADVFSLPEAEIEEALKKRKQDFKLKEERRLAYVAFTRAKDRLYLCYPASY 702 Query: 736 IQDNSERFPSVLV-------QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL----- 783 + SER PS+ + EL + A+ +S+ K + Sbjct: 703 GE--SERPPSMFIAEACYNSGELHPDMELVEDAEEKAAVATRDSDLDRKKNEIKRQILST 760 Query: 784 ---HTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE---------T 831 + P A+ AG+ + L +P Sbjct: 761 IDSEPDLALYNLLLYQHLCGRPIAINCPQAAMAGEEAAVIRAELDAGIPRGMQFDPKEVR 820 Query: 832 VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ 891 + L+ + P + Q L + RT+DSE LS + L V+Q Sbjct: 821 LSYSGLKTYEECPKKYELQYLLNIPSRTKDSEGE-------SPLSFGNYIHKTLELAVKQ 873 Query: 892 DDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME--IDLACNG 949 + R A F + + + R + +E + +G Sbjct: 874 QISTREELDAIAEKTSLLPDFAGVDKDKAKRIFDVFWARNKDTIRRSVGVEQFFNFTMDG 933 Query: 950 VQITGWLPQVQPD-GLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRF 1008 Q TG + +V + L L++D R Sbjct: 934 FQFTGKIDRVDQLSENGDAEIIDYKTGREPGTED------RERQITMYMLALQRDPALRE 987 Query: 1009 PPLAAEQA-LHYLSQ 1022 L ++A L L + Sbjct: 988 KRLTPKRATLELLEE 1002 >UniRef50_C9LR66 ATP-dependent DNA helicase PcrA n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR66_9FIRM Length = 746 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 53/526 (10%), Positives = 149/526 (28%), Gaps = 82/526 (15%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRD 309 + D + ++ + A + S VG+ + + G D Sbjct: 209 LADETIRRRWQDHFHYILIDEYQDTNHAQYLMAKYIAGKSQNICAVGDADQSIYSWRGAD 268 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS-RSDNKRPLD 368 ++ F + P + ++ + + A + + + KR Sbjct: 269 LRNIMD----------FREDYPSAQIIKLEQNYRSTQTILNAANAVIKNNVERLEKRLWT 318 Query: 369 PLDSSITF--HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 + + + E + + + ++ E+ + + V+ V Sbjct: 319 ENNPGVHLQKYAASDEHNEADFIVESMMKEHGENH-VPYGKMAVLYRMNAQ-----SRVI 372 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 + R + Y + + ++ L L + ++ +++VP R I Sbjct: 373 EESMVKRGIAYTMVGGTRFYDRAEIRDMLAYLKLVANFRDDISLMRIINVP----RRGIG 428 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + ++ L ++ + + ++ Sbjct: 429 QTTMQKLSEFSKQGNM---------------------------------------SMFEG 449 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 ++ +E S + L + + + E + + + ++ Sbjct: 450 IMSLEE-SDIPVPARTKLQKFSALIFSFLN-ASTEGDVFTLIQKIMTDTEYLSVLQQSSD 507 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVP-LSLLRDELAQRLDQERISQRFLAGPVNICTLM 665 E+ ++ L +++ L + S V + T+ Sbjct: 508 PQAQSREENLGELLNVAKDFTQEQPEGGLPEFLEKV--ALVNDVDSFEEQDDKVTLMTIH 565 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + F +V + GM++G++P + D + +++R L A+ A++ Sbjct: 566 SAKGLEFPIVYMAGMDEGIFPGVRS------------LMDETALEEERRLCYVAITRAKE 613 Query: 726 KLYISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNC 769 KLY++ S ++E+ + EA Sbjct: 614 KLYLTTSAVRTMYGQVKPYVESRFLKEIPVDLLDEIRGNSSEAKRR 659 >UniRef50_A4XBE9 ATP-dependent DNA helicase PcrA n=18 Tax=Actinomycetales RepID=A4XBE9_SALTO Length = 795 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 98/760 (12%), Positives = 198/760 (26%), Gaps = 124/760 (16%) Query: 127 LSSKAADLFDQYLVYRPDWLAQW----------ETGHLVEGLGEAQAWQA-------PLW 169 L+ + A L V+ + +A E + G W + + Sbjct: 65 LTHRIAYLLAARQVHPGEIIAITFTNKAAGEMKERVAQLVGPRARLMWVSTFHSACVRIL 124 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETL-ESATTCPPGLPSRVFICGISALPPVYLQALQ 228 +A E+ + A+ +R ++ + P P+R +S L + + Sbjct: 125 RAEHEHAGLKSTFSIYDADDSRRLMQLVARELDLDPKRYPARGLAAQVSNLKNELVDPEE 184 Query: 229 ALGK-HIEIHLLFTNPCRYYWGDIKDPAYLAK--------------------LLTRQRRH 267 + Y +++ L R R Sbjct: 185 FAARAKGPNERALAEAYTLYQRRLREAHALDFDDLIMTTVHLLQSHPHVAETYRRRFRHV 244 Query: 268 SFEDRELPLFRDSENAGQLF------NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ 321 ++ + +L + VG+ + + G +L Sbjct: 245 LVDEYQDTNHAQYVLIKELVSGTDGLDPAELCVVGDADQSIYAFRGATIRNILE------ 298 Query: 322 ELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHV 378 F D ++ + + N A A ++ + I +V Sbjct: 299 ----FERDFTDARTILLEQNYRSTQTILNAANAVIDRNTSRKPKRLWSEAGTGDPIVGYV 354 Query: 379 CHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 + E + + + ++++ T P D+ V VF LPY Sbjct: 355 ADTEHTEADWVAREIDRLVDDGDT-RPGDVAVFYRTNAQ-----SRVFEEVFIRVGLPYK 408 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 + + ++ L + + + +L+ P Sbjct: 409 VVGGVRFYERKEVRDALAYLRALVNEDDTVSLRRVLNTP--------------------- 447 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 R D L + + ++ L R S A Sbjct: 448 ---RRGIGDRAEACVEALASRDRISFGAALRR----------------ARDAPGISTRAA 488 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 + +LL + A E LE L + D + + +++ Sbjct: 489 NGIAEFVALLDGVREVAETSAPEEVLEALLNRSGYLTELEESLDPQDAGRVDNLQELVSV 548 Query: 619 IIAEGLGAQY----GDAVPLSLLRDELAQRLDQERISQRFLAGP--VNICTLMPMRSIPF 672 + G+ ++ +++A D +++ V + TL + + F Sbjct: 549 AREYTERVEGLGEEGERATVAGFLEQVALVADADQLPADDPEHQGVVTLMTLHTAKGLEF 608 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 VV L GM DGV+P GD +++R L + A+Q+LY+S Sbjct: 609 PVVFLTGMEDGVFPHART------------FGDNHELEEERRLAYVGITRARQRLYLSRA 656 Query: 733 GRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 + PS ++EL + + G Sbjct: 657 VTRSAWGQPAYNAPSRFLEELPAELVRWERTEGSYTSWAGGGGGVGGRADRGQGGFTGGT 716 Query: 791 PQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE 830 P+ Q R L AS+ A Sbjct: 717 PKAAQLARRLGVDGSRLATASELPSAPPRVAVGDRVNHQR 756 >UniRef50_Q5PB91 DNA helicase II n=20 Tax=Rickettsiales RepID=Q5PB91_ANAMM Length = 671 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 73/606 (12%), Positives = 166/606 (27%), Gaps = 100/606 (16%) Query: 163 AWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPP-----GLPSRVFICGIS 217 Q L KA+V T + ++ I+ + P L I + Sbjct: 142 DDQLQLIKAIVNDTQPGHPAEECKKMMH--AIQRWKEKGLLPAGVTDTELQKCPNI--VR 197 Query: 218 ALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLF 277 + Y + L+AL LL N + L+ + + ++ + Sbjct: 198 DVYYEYQERLKALNCADFGDLLLYNVSMF----SAHADVLSHYQEQFKYVMVDEYQDINT 253 Query: 278 RDS-ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 + VG+ + + G + +L F D P+ + Sbjct: 254 VQYLWLRLIVQKRKNICCVGDDDQSIYSWRGAEVGNILR----------FADDFPEAKIV 303 Query: 337 NIQSDILELENRAVAGVNIEEFSRS---DNKRPLDPLDSSITFHVCHSPQREVEVLHDRL 393 ++ + N A I ++S + + + E + + + + Sbjct: 304 RLECNYRSTSNILCAASAIINNNKSRLGKKLWTTNHAGQKVGLMKFWDGRMEAQFISEYI 363 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 + ++V + F VF +PY I ++ Sbjct: 364 K----GSSEYRFDETAILVR-----AGFQTRVFEEYLVRCGIPYKIIGSTKFYDRQEIKD 414 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 ++ L + + +++ P + + + + Sbjct: 415 LVAYLRVVTNPKNDIAFERIVNKP----KRQLGASTVAKM-------------------- 450 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 YA ++ +S L L +LL + Sbjct: 451 -------------------RAYARDNRLSLLESGESMIRFGLLPERTSNTLQNLLDKFKC 491 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 WR L + + + A + + + A + Sbjct: 492 WRETLDTTSLTTVMQAIAEGSG--YMNMLKDEGDAGASKIENIRELFAAVGNFENATK-- 547 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 + ++ + + S V + TL + + F +V L G +GV+P + + Sbjct: 548 ---FLEHISLVTEVD--SPEQANNHVYLMTLHAAKGLEFPLVFLPGWEEGVFPHEKSIHD 602 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQEL 751 + +++R L + A+++L+IS + +N S ++EL Sbjct: 603 ----------STGNALEEERRLAYVGMTRAREQLFISCVAVREVNNWRQPMKISRFIKEL 652 Query: 752 IDYIGQ 757 Q Sbjct: 653 PAEHVQ 658 >UniRef50_C8WTI7 ATP-dependent DNA helicase PcrA n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTI7_ALIAD Length = 756 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 86/650 (13%), Positives = 173/650 (26%), Gaps = 98/650 (15%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA-- 218 A Q L + L++ + + RA L+ + + + G Sbjct: 119 DAADQVSLVRRLMQEMNIDVRKFEPRAVLH-----AISQHKNELRSAEKALDLAGSPYDK 173 Query: 219 -LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLF 277 + VYL + L ++ + P LA R ++ + Sbjct: 174 MVGDVYLAYERRLRENQALDFDDLLVKTVELFRKV-PDVLAYYQHRFSHIHVDEYQDTNH 232 Query: 278 RDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 L VG+ + +G G D +L F PD + Sbjct: 233 AQYVLVKLLAERRRNLCVVGDSDQSIYGWRGADIRNILE----------FQRDYPDARVI 282 Query: 337 NIQSDILEL---ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL 393 ++ + A + + N V + E + + D + Sbjct: 283 RLEQNYRSTGRILRIANQVIQHNQMRLEKNLWTDRGEGEKAKLFVAPDERVEADWVADEI 342 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 M+ RD+ ++ V A R +PY I ++ Sbjct: 343 ARMVANGR--EYRDVAILYRTNAQ-----SRVLEEAFLQRGIPYRIYGGLRFYERREVKD 395 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 I+ L L + L +++VP + I + L L ++ G Sbjct: 396 VIAYLRLIANPNDDVSFLRVVNVP----KRGIGDTTLEKLAEYARHRGT----------- 440 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 +++ L E +G+ + L S + + Sbjct: 441 ----------------------------SLFEAALHALE-AGISKKAASALQSFVELIQT 471 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 + PL + D AE + ++ Sbjct: 472 L-QLQRAFLPLTDLTDELLDRSGYREALRAERSLEAENRLENLDEFLSLTREFDEDGVPD 530 Query: 634 -----LSLLRDELAQRLDQE----RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 L +A D + R +R V++ TL + + F VV L+G+ +GV Sbjct: 531 GEMGALEQFLTHVALVSDADLPGGRPGRREDLDEVSMMTLHAAKGLEFPVVFLVGLEEGV 590 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF- 743 +P + A G + + ++ + + A ++LY++ + R Sbjct: 591 FPHRRALDGGEELEEERRL------------CYVGITRAMERLYLTTCRSRMLFGERRSF 638 Query: 744 -PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ 792 PS + E+ + P+ Sbjct: 639 TPSRFLSEMPASDIERAGEEDAMFGWGWRDARAGVRAPAHAVADAASGPR 688 >UniRef50_C7M3I8 UvrD/REP helicase n=3 Tax=Bacteroidetes RepID=C7M3I8_CAPOD Length = 789 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 71/521 (13%), Positives = 158/521 (30%), Gaps = 76/521 (14%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIY 312 P LAK R R ++ + L + VG+ + + G + Sbjct: 212 PDVLAKYQNRFRYILVDEYQDTNHSQYLIVKALADRFHNICVVGDDAQSIYAFRGANINN 271 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN---IEEFSRSDNKRPLDP 369 +L+ F + P+ + ++ + +N A + + + Sbjct: 272 ILN----------FKNDYPEAKEYKLEQNYRSTKNIVEAANSVIEHNKIRLEKVVFTENE 321 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 L I H + E + + + L + V+ A Sbjct: 322 LGEPIKVHRSPTDADEGRFVASSIFENKMQHQ-LPNGNFAVLYRTNSQ-----SRAIEDA 375 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 R +PY I + ++ ++ L L + E ++ +++ P + T E Sbjct: 376 LRKRDIPYRIYGGLSFYQRKEIKDMLAYLRLIINPNDEEALVRIINFPA-RGIGETTMEK 434 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L +S + + + EL + T + + +L A+ ++ Sbjct: 435 LTLAANHYKKSIFEIMYNINKLPELHINTTTKQKLTDFVVMILNFQALNQKANAFEVAEQ 494 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + +GL+ E E A M Sbjct: 495 VAKKTGLLQEFKK-------------------------------------DGTPEGIAKM 517 Query: 610 TLIEQQWQAIIAEGL--GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 IE+ + LS +++A D ++ + V + T+ Sbjct: 518 ENIEEMLNGMKDFVEGQEDVADSRASLSEYLEDVALATDMDK--EIGDDDRVALMTIHLA 575 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F V ++GM + ++P ++ R+ +++R LF AL A+++ Sbjct: 576 KGLEFPYVYVVGMEEDLFPSAMSIQS------------RNDLEEERRLFYVALTRAEKQA 623 Query: 728 YISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEA 766 Y++Y + + PS ++E+ + Q Sbjct: 624 YLTYAENRYRWGKLSDAEPSRFIEEIDERYLQYLTPSISNP 664 >UniRef50_B2KB12 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KB12_ELUMP Length = 786 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 55/510 (10%), Positives = 126/510 (24%), Gaps = 87/510 (17%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 + + ++ + L VG+P + + G + Sbjct: 206 NEDVREYYQNIFQHILVDEYQDTNHTQYIITRTLAYKHRNLCVVGDPDQSIYSWRGANIR 265 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD---NKRPLD 368 +L F PD + ++ + + + + + ++ + Sbjct: 266 NILE----------FEKDFPDAKIITLEQNYRSTQIILDSSNKLIKKNKKRKDKSLYSNK 315 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 I + E + ++ + + DI V F Sbjct: 316 TSGEPIEVRELLTEGEEARWTAQNIANLI--EDGASLNDIAVFYRTNAQSRN-----FED 368 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 LPY + ++ + + + + +L +L+ P Sbjct: 369 NFRKYQLPYRLIGAVRFYDRREIKDILGYARVLVNPLDTVSLLRILNTPKRGIGKT---- 424 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L YA +Q++ Sbjct: 425 ---------------------------------------AEEKFLEYANLHNISLYQALQ 445 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR-DMLNAFFLPDAETEA 607 GL + ++ R L P + + + E + Sbjct: 446 RSAFVEGLTPTARRAAQEFINLMDTLRLELKVTSPTDIVNKILTLSGYWKAVEDEVEKDL 505 Query: 608 AMTLIEQQWQAIIAEGLGAQY-----GDAVPLSLLRDELAQRLDQERISQRFLAGPVNIC 662 Q ++ + LS E+ + Q AG V + Sbjct: 506 EAGARLDNLQELVNAVKEYEERMARTEREASLSDFVQEI-SLITGADEKQDSSAGAVTLM 564 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 T+ + + F VV + G+ +G++P +++R L A+ Sbjct: 565 TVHLAKGLEFPVVFVSGLEEGLFPLSSKDD--------------DDLEEERRLCYVAMTR 610 Query: 723 AQQKLYISYIGRSIQDNS--ERFPSVLVQE 750 A+ +L+++Y PS + E Sbjct: 611 AKDRLFMTYTSTRRIFGKMYTNLPSRFLFE 640 >UniRef50_B4CU41 UvrD/REP helicase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU41_9BACT Length = 678 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 74/632 (11%), Positives = 170/632 (26%), Gaps = 101/632 (15%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICG-ISAL 219 + Q L K ++ T + N+ + I ++ + G + A Sbjct: 114 DEGDQMGLIKKIITRTAAKDEKLDP--NVAKNLISKAKNNGWREVSPGDEKTLAGAVFAR 171 Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 L+ L A+ + L + + R R ++ + Sbjct: 172 YQAELKTLNAVDFDDLLLLAVKVLSEH-------ADVRDRWHRRFRYLMVDEFQDTNRLQ 224 Query: 280 SENAGQLFNSDG-------EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPD 332 E L VG+ + +G G + +L F PD Sbjct: 225 LELVSMLAKPAEGTGGRPNVAVVGDDDQSIYGWRGAEVSNILE----------FEAHFPD 274 Query: 333 NLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSPQREVEVL 389 ++ ++ + + + R + ++E E + Sbjct: 275 PVVVKLEQNYRSTNAILNTANFLIKNNPRRRPKKLWSSAGDGDKVRIVGMSDDRQEAEFI 334 Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 + + + + ++ + + +PY I ++ Sbjct: 335 ANEIAQR-SVTESAPHEEFAILFRMNAQ-----SRLLETNLRQLNIPYRIIGGKSFFDRR 388 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 ++ ++ + + +L +++ P I+ + Sbjct: 389 EVKDLLAYANCLVNTDDDVSLLRIINTPA----RGISSNTVEKATD-------------- 430 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 ++ + + + L V L + Sbjct: 431 -------------------------FSAKQKCSVFDVLTNEAFRGTLTKRTVESLDRFVE 465 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD-----AETEAAMTLIEQQWQAIIAEGL 624 L+ + L PL + V R+M+ D +T E ++ Sbjct: 466 MLDRFETKLNT--PLSDHAAVLREMMKETGYLDELKRTCKTPQEALSRETNLMDLLKSFE 523 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 Q + L DE++ R ++E V + TL + + + V L+G+ +G+ Sbjct: 524 DYQGRSSEGLRGFLDEMSLRQEREEDDDDARGTGVTLITLHAAKGLEYPHVYLIGLEEGL 583 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF- 743 P + D++R L + A++ L +S+ I+ S Sbjct: 584 LPHDRSK-------------LEGTVDEERRLLYVGITRARRTLALSWCRHRIRYGSPMPC 630 Query: 744 -PSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 PS ++EL E+ A Sbjct: 631 TPSSFIKELPPEWIIHRDATQILQAPVSEAAA 662 >UniRef50_A1TNG2 ATP-dependent DNA helicase UvrD n=11 Tax=cellular organisms RepID=A1TNG2_ACIAC Length = 818 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 68/561 (12%), Positives = 155/561 (27%), Gaps = 43/561 (7%) Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 Q + + + R Y + A R + ++ + Sbjct: 198 YQLYEEQCQREGVVDFGELMLRSYELLRDNDPIRAHYQRRFQHILVDEFQDTNKLQYAWL 257 Query: 284 GQLFNSD---------GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL 334 Q+ VG+ + + G + Q+ DV Sbjct: 258 KQIAGDVVDGRLVTHGSVLAVGDDDQSIYAFRGARVGNM-------QDFVREFDVRHQIK 310 Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 L + + A A ++ N R + + + E + + D + Sbjct: 311 LEQNYRSYSNILDSANALISHNSRRLGKNLRTTQGPGEPVRVYEAPTDLAEAQWMVDEIR 370 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 + + R+I V+ V SA + +PY + ++ Sbjct: 371 QL-ARNDGFERREIAVLYRSNAQ-----SRVIESALFNAAVPYRVYGGLRFFERAEIKHA 424 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR-WGIDDDNVRE 513 ++ L L ++ + +++ P I + L+ ++G + Sbjct: 425 LAYLRLLENPHDDTSFMRVVNFPP----RGIGARTVEVLQDAARQAGCSLHDAVSAVPGK 480 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 + G + G+ E E L +L +N Sbjct: 481 AGANLGAFVAMVDVMREQTQGQTLRGIIGQMLESSGLVEHYRAEKEGADRLENLDELINA 540 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 + QE + + + D A ++ + + + P Sbjct: 541 AESFVTQEGFGRDAVALPVDEHGASLRQSPASQGIDPSLPVVDEPLPGGVDADTGETLSP 600 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L+ L+ + V + T+ + + F V + GM +G++P + + Sbjct: 601 LAAFLTH--AALEAGDNQAQAGQDAVQLMTVHASKGLEFDAVFIGGMEEGLFPHENSMS- 657 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQEL 751 DR +++R L A+ A+++LY+S+ + R+ S EL Sbjct: 658 -----------DRDGLEEERRLMYVAITRARKRLYLSHSQTRLLHGQTRYNIKSRFFDEL 706 Query: 752 IDYIGQSHYLPGDEALNCDES 772 + + + Sbjct: 707 PEAALKWITPKQQGFGSFAPQ 727 >UniRef50_D2PLA7 UvrD/REP helicase n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PLA7_9ACTO Length = 1076 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 103/891 (11%), Positives = 233/891 (26%), Gaps = 111/891 (12%) Query: 180 GQPRWHRANLYQRFIETLESATTCPPGL---PSRVFICGISALPPVYLQALQALGKHIEI 236 H A + F + +++ L P + G SA P ++ ++++I Sbjct: 157 WPRSLHPALKTRGFTDEVQAVIGKARQLGLDPEDLSAIGQSASRPEWVAVGDFFEEYLQI 216 Query: 237 H-----LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF-NSD 290 L ++ + P AKL + ++ + ++ + + Sbjct: 217 LDHEQVLDYSELIHRAVILAQQPEVQAKLREEFKVVFVDEYQDTDPGQTKLLQAIAGDGR 276 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSD--------LESSQELDAFVDVTPDNLLHNIQSDI 342 VG+P + + G D LL E + ++ L + ++ Sbjct: 277 DLVVVGDPDQSIYTFRGADVRGLLRFTEEFPTVTGEPAAQIALATTRRFGTTLLRVSRNV 336 Query: 343 LELENRAVAGVNIEEFSRSDN-KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 + + + ++ + E+E + D L +D Sbjct: 337 VNRLGVPGTLDRETFERFRNPDASGCVFGPGKVEANLYSTSGAELEHIADLLRRAHVQD- 395 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR-ARQSHPVLEAFISLLSL 460 + D+ V+V P ++ A A +P ++ P + + L Sbjct: 396 GVAWHDMAVLVRSGSRSIPPLRR----ALAAAGIPVDVAGDELPLSREPAVRPMLLALRA 451 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 L +D +R L Sbjct: 452 VADP-----------------------ATLTVDVVRALALSPLGAMDAGQLRRLARVLRK 488 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 + G R+ S + ++++ + +L +L R L Sbjct: 489 RDREAAGGQRLPRS----SDELLREALMEPLLLDEQASPAEARFVALGERLLKARNILTA 544 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAET------EAAMTLIEQQWQAIIAEGLGAQYG-DAVP 633 +E + + A A+ A+ Sbjct: 545 GAAPDEVMWSLWSESPWLRRLRGQANSGGEVARAANRDLDSLCALFDAAGRAEEQVGFKG 604 Query: 634 LSLLRDELA--QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 +S EL + R + V + T + + +++V + + +G +P Sbjct: 605 VSAFLSELESLEIAADNRYDATYRENGVQLMTAHRSKGLQWRLVVVASVQEGQWPDLRRR 664 Query: 692 LGFD------LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 + ++R LF A+ A+++L ++ + D PS Sbjct: 665 GSLLEPDRLGPDGLVEPLSAGALLAEERRLFYVAITRARERLIVTAVQAPEADGD--QPS 722 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 L+ EL D + L+ A ++ L + + + A + Sbjct: 723 RLLAEL-DIPVKLVAGRPRRPLSLPGLVADLRCVLADPASSAALKRVAADKLAQLAEATD 781 Query: 806 WL----------PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQV 855 + P + L P+R F Q R Sbjct: 782 ERGYPLVPTADPDRWWGVRERTKSERPIAVPDQPVPLTGSALTTIVDCPLRWFLQRRAG- 840 Query: 856 NFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL------VEQDDAERLFRRFRAAGDLPY 909 E + + L +A+ + D+ + + Sbjct: 841 -----------GETPSTSAIGFGMVLHTLADAVATGTLPPDADELNGWLDKVWTQLEFES 889 Query: 910 GAFGEIFWETQCQEMQQLADRVI---ACRQPGQSMEIDLACNG-----VQITGWLPQVQP 961 + Q +++ R G +E + VQ+ G + +V+ Sbjct: 890 AWISDRERVEAEQALRRFVAWHQGRPDRRMIGSEVEFSVLLPDADHPAVQVKGRMDRVEQ 949 Query: 962 DGLLRWRPSLLSVAQGMQL------WLEHLVYCASGGNGESRLFLRKDGEW 1006 D + R L + ++ +Y + + + +L Sbjct: 950 DADGKIRVIDLKTGRTAPTKPAVARHVQLAIYQRAIASRQLKLLGEDAESG 1000 >UniRef50_C6D4S8 ATP-dependent DNA helicase PcrA n=46 Tax=Firmicutes RepID=C6D4S8_PAESJ Length = 785 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 63/508 (12%), Positives = 141/508 (27%), Gaps = 78/508 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIY 312 P L + R ++ + L + VG+ + + G D Sbjct: 209 PEVLEFYQNKFRYIHVDEYQDTNRAQYMLCRMLADKHHNICVVGDSDQSIYRWRGADITN 268 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDP 369 +L+ F D P+ ++ + N A + + + Sbjct: 269 ILN----------FEDDYPEARTIMLEQNYRSSANILEAANAVIKLNTGRKPKKLWTDQG 318 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 IT + S E + + ++ D ++ V Sbjct: 319 EGDMITLYQADSEHDEGYFVTGTISKNVKSGR--RYDDHAILYRTNAQ-----SRVIEEI 371 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY I ++ ++ L L + + +++VP + I + Sbjct: 372 LIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLISNPDDDISLQRIINVP----KRGIGDTT 427 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + L + G N++ ++L A Q Sbjct: 428 VAKLAEEAVRQGTSIFSVLGNLQGIDLNARAQGLLHE----------------------- 464 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 ++ L L+ E+ L + + + E+ A + Sbjct: 465 --------------FRDMIDNLTQMVDYLSVTELTEKVLEMSQYRIELQREKTLESTARL 510 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG--PVNICTLMPM 667 I++ + + V +A ++ A V + T+ Sbjct: 511 ENIDEFLSVTMDFEKRNEDKTLVAFLTDLALIADIDSMDKDDDGKPADNNSVVLMTMHSA 570 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F VV ++GM + ++P D +++R L + A+++L Sbjct: 571 KGLEFPVVFIIGMEESIFPHS------------RALNDNEELEEERRLAYVGITRAEKQL 618 Query: 728 YISYIGRSIQDNS--ERFPSVLVQELID 753 Y++ PS +QE+ D Sbjct: 619 YLTCARSRTLFGRISANLPSRFLQEVPD 646 >UniRef50_B1YKM7 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Exiguobacterium RepID=ADDB_EXIS2 Length = 1143 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 145/1079 (13%), Positives = 282/1079 (26%), Gaps = 194/1079 (17%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANID--FPLP 65 + L + + + L +V + ++ ++ ++ + Sbjct: 12 GKTTQLIERVIDQLTEQPLGP---SIYFIVPDQMSFE-MERRIATDPRLSGLVRMEVMSL 67 Query: 66 ASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF 125 F + M ++P L E LLR + + ++ K+F Sbjct: 68 RRFAFHMIRDYGN------------------QVIPFLDETGTQLLLRQVVEEAEEELKIF 109 Query: 126 -----------QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 L A F + LV PD L Q A +++ E Sbjct: 110 KRTKNMPGFYKGLDELIAS-FKRSLVN-PDMLRQIS--GASPERSPKLNDLALIYERFTE 165 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 H + + IE L A VF+ G Q L Sbjct: 166 RISDK---ALHADDYFTTLIELLPKADLSDV----SVFVDGFYEFSLQEQQVL------- 211 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 +L+ + L D Sbjct: 212 -----------------------LRLMELTKDMHLS-------------FTLDVEDVYT- 234 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 + +G R Y+ L+ ++ Q DI + Sbjct: 235 ----KQSEFGVSQRCYMQLIEQMKERQIAH---------------EDIYYGQTVKFQSTG 275 Query: 355 IEEFSRSDNKRPLDPLDS---SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + ++ P D +T + Q E E + + ++ +DI + Sbjct: 276 LRMLEQALLSPGYPPTDEEVTGVTVSAAVNRQVETEAAVRKAIQLV-RHDGYRFKDIAFL 334 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 V ++ Y+ ++ F +PY + R + HP++E ++L + + + E V Sbjct: 335 VRHLEPYADHLERAFQLYD----IPYFLDQRESMVHHPIVELVHAVLEIVMTGYREESVF 390 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 LL ++ + L L +V E GI+ G +L+ + + Sbjct: 391 RLLKTELIPLPAEDPRLALDRLETFVLERGIK-GSMWKKPWQLKRRLADEISLTDA---- 445 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 Q ++ E + ++ L + L W Sbjct: 446 -ELQEELELNEWRQFLVEAIEPLEKRFKASKTMSEYTRALYRFLEEHHMTDRLTVWKQ-- 502 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 A + + + + + + A + L + L+ R S Sbjct: 503 ----QALEVNELSQAREHDQVYEAVLLLFEQLEAAAPEATLTTELFVQMVETGLESLRFS 558 Query: 652 QRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR---- 706 + V + R KVV LLG NDG+ P D+ Sbjct: 559 LVPPSLDQVIATDYVRGRLQQVKVVFLLGANDGLIPLVEDQSKLLSEGDHDFLHDQGIPV 618 Query: 707 -----SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS--- 758 DD+ Y + + + + L+ISY D P+ +V+++ + Q Sbjct: 619 GKASLDVFDDELYYLYQGVTAPSESLHISYALVDE-DGKALQPASIVKQIKHQLLQDRPV 677 Query: 759 ---HYLPGDEALNCDESEARVKAH--------LTCLHTRMPFDPQNYQPGERQSYAREWL 807 GD A + L L R P P + R Sbjct: 678 KTYFAEAGDHAPDDQLQFVTSPERAAAAAAIELRRLQRRYPIQPSWFDVYNRLLENGRGR 737 Query: 808 PAASQAGKA--HSEFVQPLPFTLPETVP-------LETLQRFWAHPVRAFFQMRLQVNFR 858 + A + +PLP L + + + + A + F + L++ R Sbjct: 738 ERMALFSNALFYQNQAEPLPEDLARNLYGDTIKASVSRFETYNACSYKHFARYGLRLKER 797 Query: 859 TEDS-EIPDTEPFILEGLSRYQINQQLLNALVEQDDAE--------------RLFRRFRA 903 E PD L+ +N + + D + + Sbjct: 798 KLYKFEAPDIGNLFHGALNDLSMNIKASGKRWRELDDQSCSNLAKEAVEKVTPEIQNAIL 857 Query: 904 AGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL-------------ACNGV 950 +G + + Q + L + EI + Sbjct: 858 MSSNRFGYIKKKLTDVVEQTAKMLVKQAERSEFEPDLFEISFGNAMFPPLRFTLPDGTEI 917 Query: 951 QITGWLPQVQP---DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEW 1006 + TG + +V L R + + E A + + + Sbjct: 918 EFTGRIDRVDQATIGDQLYVRIVDYKSSAKELDFAEIYYGLAIQMLLYLKTVVEQSEVL 976 >UniRef50_Q018Z5 ATP-dependent DNA helicase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q018Z5_OSTTA Length = 859 Score = 229 bits (582), Expect = 7e-58, Method: Composition-based stats. Identities = 70/534 (13%), Positives = 149/534 (27%), Gaps = 61/534 (11%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIY 312 P A R + ++ + E +L VG+ A +G G + Sbjct: 285 PDVRAYYERRWSQVLVDEFQDTSTTQYELIRKLSQPQGSVFVVGDADQAIYGWRGAEVAN 344 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE---FSRSDNKRPLDP 369 + + F + H + ++ A + + F + P Sbjct: 345 IRTQ---------FDQDFKEVQTHMLTTNYRSTSTIVEAAQAVIKESSFPSPLDLVAHTP 395 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + + + E E + ++ +D L D+ V+ V A Sbjct: 396 GGRDVAIVEANDDREEAEFIALEARKLV-QDSDLRYSDVAVLYRTNSQ-----ARVLEEA 449 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +P+ + + S ++ I+ L + + + + +++ P I Sbjct: 450 FIRAGVPHTVVGDTSFYSRKEIKDMIAYLRIVSNSSDTVSLNRIINTP----TRGIGNST 505 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + L W+ + G+ L A + +LP Sbjct: 506 IEKLNAWLKTLPKKDGLSPSIGDALLRGAWKTNPGEQ------------------SELLP 547 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + GL A + + + + ++ P E V + + DA+ Sbjct: 548 SADEMGLTARARTAVLNFVELMRACQQTAMNATPGELLEDVIKRTGYETMVLDADDGVDR 607 Query: 610 TLIEQQWQAIIAE---GLGAQYGDAVPLSLLRDELA--QRLDQERISQRFLAGPVNICTL 664 Q+ + E + D V L L L L + T+ Sbjct: 608 WAFVQELINLAKEPPRDVDETIQDRVGLEALGAFLEGVSLLTSAETDDVTGGDKAKLMTM 667 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + + F V + G+ DG+ P D D++ LF + A+ Sbjct: 668 HASKGLEFDTVFIAGVEDGLIPFIRNGDSDDDQ------------DEEVRLFYVGITRAK 715 Query: 725 QKLYISYIGRSIQDN---SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 +KL + + + S L+ + + + L+ S Sbjct: 716 RKLMLCHARERRRFGQSPQAARRSFLLDSISATLTGTKKPERPVTLHGGVSARA 769 >UniRef50_C1ZKV9 DNA/RNA helicase, superfamily I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZKV9_PLALI Length = 680 Score = 229 bits (582), Expect = 7e-58, Method: Composition-based stats. Identities = 63/542 (11%), Positives = 153/542 (28%), Gaps = 76/542 (14%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIY 312 P L + R ++ + + VG+ + +G G + + Sbjct: 202 PEALERQQNRFDFVQIDEYQDTNELQFRLIESIVRRHQNLCVVGDDDQSIYGWRGAEVKH 261 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR-AVAGVNIEEFSRSDNKRPLDPLD 371 +L F P + ++ + E+ +A + KR + Sbjct: 262 IL----------GFKQSFPAAKVVRLEDNYRCTESIIQLANQLVAHNRGRHEKRLIAHRG 311 Query: 372 S-SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 S+ F Q E E + + ++ + + P +I ++ + +F Sbjct: 312 GTSVVFREYPDEQAEAEGVVRDIAYLIHQL-NVRPCEIAILFRTNEQ-----PRIFEHEL 365 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 + + Y I ++ ++ + L + + +L +++VP I + Sbjct: 366 RRKQIHYRIVGGQSFFDRKEIKDLQAYLKVLVNPRDDLSLLRIINVPP----RGIGDATC 421 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 L L A++ + W + Sbjct: 422 ERL---------------------------------------LARAVKEKRRFWDVIPDA 442 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQER---PLEEWLPVCRDMLNAFFLPDAETEA 607 + + ++ + +L Q++ R Q V ++ Sbjct: 443 AAAGEITSKALNNLRQFEKQMSGLREAFKQPGVKLSETFLRMVETTGYAREIERTYKSAE 502 Query: 608 AMTLIEQQWQAIIAEGLGAQY-GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + + + L DE++ +R + + TL Sbjct: 503 QQEMRNLILGEFANAVSQYEAQSRSPSLEGYLDEISLGGSDFAAPERPDENAITLMTLHS 562 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F+ V L+G+ +G+ P + + + + S +++R L + A+ Sbjct: 563 AKGLEFERVYLVGLEEGILPHKRSVD--------EEFENPSSVEEERRLCYVGITRAKDF 614 Query: 727 LYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 L I+ ++ E PS ++E+ I + G S Sbjct: 615 LTITRSQSRVKWGKKRETKPSRFLKEMRTAIETTAAPEGAGIDTAARSRTTGGGRTGHPA 674 Query: 785 TR 786 Sbjct: 675 PH 676 >UniRef50_B2V7G3 UvrD/REP helicase n=5 Tax=Aquificales RepID=B2V7G3_SULSY Length = 706 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 59/527 (11%), Positives = 138/527 (26%), Gaps = 94/527 (17%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIY 312 P L + + ++ + + L VG+P + G Sbjct: 201 PEVLERWRNKFDYILVDEYQDTNRIQHKLLKLLVGDKHTITVVGDPAQCIYTWRGAHPEN 260 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILEL------ENRAVAGVNIEEFSRSDNKRP 366 +L F P + ++ + N ++ + + Sbjct: 261 ILD----------FEKDFPGTKIVKLERNYRSTKKILDCANAVISKSKGKWKGKVLTLWT 310 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 I + + E + +++ + ++ + D V+V F+ Sbjct: 311 DKEEGEDIFLVPLENEKEEARFIANKIKQLAQDG---SYGDFAVLVR-----MTFLTRNI 362 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 A +PY + ++ ++ L L + L VP + Sbjct: 363 EEAFISNGIPYQVIGGLKFFERAEVKDILAYLKLAVNPKDYASFERSLTVPP----RGVG 418 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 ++GL Y++ + + W L Sbjct: 419 DKGLEYIK-----------------------SNFKTDWIQALK----------------- 438 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 D + L L + + + + E E Sbjct: 439 ----DSYERFNKSVKIKLQEYLELMEYVLENAKF--SPSKTAKEIVERIGYQEYLQKEYE 492 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + +I A+ L + + I T+ Sbjct: 493 KDWEDRVENINELIIALEEAEKEGK----TLDQFFEESALMQAQDTIDNQNKAKIMTVHG 548 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F V + G+ +G++P A D ++ +++R LF A+ A+ K Sbjct: 549 AKGLEFDTVFVAGLEEGIFPSGRAFD------------DPTQLEEERRLFYVAITRAKNK 596 Query: 727 LYISYIGRSIQDNSERFP---SVLVQELIDYIGQSHYLPGDEALNCD 770 LY++Y ++ P S + ++ ++I ++ Sbjct: 597 LYLTYAKERKSYGNKSVPTKRSQFIDDIKEHIKLPVKQKTQPNVSNR 643 >UniRef50_C7N6W8 DNA/RNA helicase, superfamily I n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6W8_SLAHD Length = 772 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 62/554 (11%), Positives = 142/554 (25%), Gaps = 61/554 (11%) Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS 302 Y +K + + ++ + D QD + A Sbjct: 171 VYAVYQERLKMANAFDFDDLLMYTYLLFKNHPDVLEAYQDRFRYLLVDEYQDTNHAQYAI 230 Query: 303 WGKLGRDYIYLLSDLESSQELDA-----------FVDVTPDNLLHNIQSDILE---LENR 348 L + ++ + Q + + F P ++ + + N Sbjct: 231 TKLLAAKHQNIMVVGDDDQSIYSWRGADIRNILEFEQDYPQARSIKLEQNYRSSGNILNA 290 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 A A V + I ++ + E + + + + ++ ++ Sbjct: 291 ANAVVAHNTKRKQKRLFTESGDGEKILVYMASDERDEGRWIAGEIDKLH--NEGVSYEEM 348 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V +PY I + I+ L+L + Sbjct: 349 AVFYRTNAQ-----SRSLEDMLLRAGVPYRIVGGTKFFDRAEIRDVIAYLTLCINPADDM 403 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 +++ P R I + + ++ S L + Sbjct: 404 AAKRVINQP----RRGIGKTTIEHIENVARNSN------------LTFMQAAEWCLADET 447 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 +M A+ G Y + E V + L+ L R A+ R +E Sbjct: 448 LQMRTRNAIGGFVGLINDAQSYGGELRKVIEAVIDRSQLIQALEQERTDEAESR-IENIK 506 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 + + + A L + + L + Sbjct: 507 EFLSVVDEYVESHEIDESALPPEGINLLADTRQLS-------PDSLEDFLEWVR--LRTD 557 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 + V + T+ + + F V + GM + ++P + D Sbjct: 558 LDAATDDDQFVTLMTVHSSKGLEFDCVFVAGMEETLFPHSNSSR------------DPQG 605 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEA 766 +++R L A+ A+++LY++ S V E+ + +S L Sbjct: 606 LEEERRLAYVAITRARKRLYLTCAYARQIFGETHANPVSRFVGEIPSELRKSAGLGSSGF 665 Query: 767 LNCDESEARVKAHL 780 + + + Sbjct: 666 AGTGWEKRGSRRGI 679 >UniRef50_A6UNC7 UvrD/REP helicase n=1 Tax=Methanococcus vannielii SB RepID=A6UNC7_METVS Length = 1016 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 95/899 (10%), Positives = 243/899 (27%), Gaps = 130/899 (14%) Query: 168 LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVY--LQ 225 L +L+E Q L + LE L + + L Y + Sbjct: 136 LISSLIEGISQFYDFLISPEELKNYVLGELEKTDDPELILE----LDKLHDLSKFYMAYE 191 Query: 226 ALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQ 285 + I+ + C+ +P +L R ++ + + Sbjct: 192 EYKRKNDLIDYDDMVAIACKLL---KSNPVIQKQLQNRFDYILVDEFQDTNYSQLYLINM 248 Query: 286 LFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL 345 L + V + + G ++ + PD ++ + Sbjct: 249 LTKNGMLTCVADDDQCIYQFRGAYLTN----------INQLEEYYPDLKKIPLEINYRST 298 Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPL---DSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 EN + + + K+ + + + E E + + + +++ Sbjct: 299 ENIVNLSQELIKNNEKREKKTVKSNKSSEEKVNVVSMPDDYSEAEWVSNEVQNLIK--KG 356 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 LTP+DI ++ F + +R +P Q PV++ +S +S Sbjct: 357 LTPKDIFILTRKTAD-----GKKFSDSLKNRLIPSEYIGNYRLQDFPVIKDTLSYISAIS 411 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 F S + R G+ + +++++ A Sbjct: 412 DPFNSGIDFKKIFT--------------------------REGLFEHDIQKINKKAKELT 445 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 ++ + Y +E E + E+ + + +L I+++ Sbjct: 446 YSNPEISGDGIFYVLEKNLS---------ELNLENLEIAKSIFENINELLIYKKNHLPSD 496 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 L+ L D+ + + +++ E + + +S + L+ Sbjct: 497 TLKHLLIEKTDIYKLEIHQNTLNSRKNIELLNSLISLVEEFESVRKTEFEEISEYLNILS 556 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 + V I T+ + K V + +++ P Q F + K Sbjct: 557 DF--EVEPEDFLENDTVKIMTIHQSKGKEAKAVFVCDVSERHLPLQYRKKEFTVPLDLQK 614 Query: 703 RGDRSRRDDDR-------YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL---- 751 + D+ + L A+ A+ KLY++Y + E PS+ + + Sbjct: 615 GIKKDNFDEKKLYLEEELRLLYVAMTRAKDKLYLTYPKIFSGNKKESKPSLFLDGISYLQ 674 Query: 752 --------IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ----------- 792 + + R+ + Sbjct: 675 NDKVNFFETEKFEKPVMSVESPINKKISEYERLVIKYSVQKQYKKAIESIITLVKINELE 734 Query: 793 ---NYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 N + + + +P S+ + + P ++++ P+ + Sbjct: 735 KSGNLSNFDLNDFLKIDIPDISELSELLT-VKLPPLVDKSMKFSASKIKQYIGCPLNFKY 793 Query: 850 QMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV----EQDDAERLFRRFRAAG 905 L + + L+ ++ L + + + + + Sbjct: 794 NYVLNIPTPKK------------AHLTVGTDVHKIFEDLGILKNKGEAIDLELAKSMLSE 841 Query: 906 DLPYGAF-GEIFWETQCQEMQQLADRVIACRQPG------QSMEIDLACNGVQITGWLPQ 958 +L +F + +E + + ++ + + +L G TG + + Sbjct: 842 NLKEFSFNSKTEFEEEYSKSLKMIEYWFDFESKNKNKILATEEKFNLDLGGFTFTGIIDR 901 Query: 959 VQPDGLLRWRPSLLSVAQGMQLWLE-------HLVYCASGGNGESRLFLRKDGEWRFPP 1010 + + + + + + A + + K G+ P Sbjct: 902 IDVTPDGEYIILDYKTGKKSSVLTKPKMAEDVQMALYAMAVFEKYGKYPVKMGQLYVNP 960 >UniRef50_C9LTM7 ATP-dependent nuclease subunit B n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LTM7_9FIRM Length = 1151 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 114/1052 (10%), Positives = 250/1052 (23%), Gaps = 178/1052 (16%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAA----NIDFP 63 + + M ++ + + ++L+ + + L+ A Sbjct: 19 GKTHACLSSMAERMKAKPMGSAL---VLLLPEHATYR-AERRLAAMMAGAGEGFVRGLVF 74 Query: 64 LPASFIWDMFVRVLPEIP-KESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKR 122 F + + ++ K+ + +++ + L + Sbjct: 75 GFKRFARHVLQETGGAAAARITSVGKRLLLKRILAEEGES------------LQAFARAA 122 Query: 123 KLFQLSSKAADLFDQYLVYR--PDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 K + ++ Y D L Q + + L A A ++ E Sbjct: 123 KQRGFTQTLERAMEEMRSYGIDGDALLQAQPALADDDLCRKLADLALIYSRYREKM---- 178 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLP-SRVFICGISALPPVYLQALQALGKHIEIHLL 239 R N ++ L L + V++ G S P + L AL Sbjct: 179 ---AGRYNDTGDMLDALAEKIPSSRLLEGAEVWVDGFSFFNPQERKILAAL--------- 226 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 + + Q G Sbjct: 227 --------------------------------FQKAKNVHITLTFDPTDEAAMQREG--- 251 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 S + L L ++ + +++ + A Sbjct: 252 --SLFYRQAQTLQQLRRLAQEMQIPV--------RVRSLEERRRFQSDALAAIERTAFSF 301 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 + + + + E+E ++ + + L RDI ++ D +Y Sbjct: 302 ----PLVPQAGAAGVALVEAATRRLEMEAAAADIVRL-CREKGLRWRDIAILTRDEAAYG 356 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + +PY ++R HP+ E S + + + + L Sbjct: 357 DMLALTLEDC----GIPYFRDNKREGVHHPLAELVRSAFEV-LRGWRYDAMFRALKTGFF 411 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + L +V E GIR G + + Sbjct: 412 KKTRG----QIDLLENYVLEFGIR-GSSWTMEEDWHWHRRRSLDEEEEGATQKEAERLCQ 466 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 ++V + + + L L + LE W Sbjct: 467 INSCRRAVAEPLQEFAAQVKAASTVRGYAEALYRLLLALDVPQTLERWADEAEK------ 520 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GP 658 I +++ + + + + D L LD +IS Sbjct: 521 AGRLAESREHRQIWDDVISLLEQMAETSGDETIKVREFEDVLGDGLDALQISLIPPGLDY 580 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR---------SRR 709 V + + + +LG N+GV PR+ G + + + Sbjct: 581 VTVADFDQNSVENARAIYILGANEGVMPRRSQEKGLLSDADRLHLKEAGLELPQGSVEGS 640 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ-------SHYLP 762 ++R+L + A+ L++SY + P+ L+ ++ + Sbjct: 641 FNERFLLYKGFTEARDYLWVSYALADT-EGKALLPASLLGQIRTVLPAVSLQTVPLEGAE 699 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW-----------LPAAS 811 ++ + A L + DP R+ A+ Sbjct: 700 RRLFAGGRQAVTALAAALRSYREKGTLDPFWCDVYNWALGERKMSIVLQKVLQGIFSHAA 759 Query: 812 QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE-IPDTEPF 870 + + F A P + F + L + R D Sbjct: 760 AELLPKELAAALYTKNRRLRGSVTRFESFRACPFQHFARYGLHLAERPAHGFRTLDLGVL 819 Query: 871 ILEGL--------------------SRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYG 910 + L +I ++L + Y Sbjct: 820 LHAALREFGERLKKDGRRWRDVGEEECGEILHEIL------GLLAPRLQNEILLSSKQYE 873 Query: 911 AFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL---------------ACNGVQITGW 955 ET + + +L + A + E + ++ITG Sbjct: 874 NLLVRIEETAKKALVRLIELDAASEFRPVAFERSFGRGAGSLPPLTYALADGSSLEITGQ 933 Query: 956 LPQVQPDGLLRW-RPSLLSVAQGMQLWLEHLV 986 + ++ D R+ +E Sbjct: 934 IDRIDMDEAGRYFLILDYKTGAAYINLVEVYY 965 >UniRef50_C2KR35 ATP-dependent DNA helicase n=3 Tax=Mobiluncus RepID=C2KR35_9ACTO Length = 900 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 73/625 (11%), Positives = 164/625 (26%), Gaps = 59/625 (9%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 A L +++ + ++ + I ++ P IS L Sbjct: 163 DTADTKALLTRIIKGRGLDPKRFTPKS--FAARISNAKNELVEPATFAEMAAPDKISQLT 220 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 Q L + + + P LAK + R ++ + Sbjct: 221 AEIYAEYQQLLRRANAFDFDDLIAEVVYLWRRHPEILAKYRDKFRYVLVDEYQDTNPAQY 280 Query: 281 ENAGQLFNS----------------DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELD 324 + L G VG+ + + G ++ Sbjct: 281 QLVRLLARDPLGDPRLDGALGAHPGAGLTVVGDSDQSIYAFRGATIRN----------IE 330 Query: 325 AFVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHS 381 F P ++ + A A ++ N + Sbjct: 331 EFEQDFPGATTVYLEQNYRSTGTILSVANAIISENSGRHKKNLWTEAGDGPKAIMFAADT 390 Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD 441 + E + + + V +PY + Sbjct: 391 ERDEAAFIIREIRDAHTA--GTPWDEFAVFYRTNSQ-----SRALEEMLTRENVPYRVVG 443 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 ++ I+ L+ + ++L +L+ P + + + +R+ SG Sbjct: 444 GTKFYDRKEIKDAIAYLTAAANPADDGNLLRILNEP----KRGLGDVAQTKIREAARLSG 499 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 +G + GQ + + L +++ +G ++ P DE G E Sbjct: 500 TSFGQAMRGFITGGV-HEGQLSAKATTALASLVNLLDNLRGLDEAGAPLDEILGTALEDS 558 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 G+L L N + A+ L E V + + + + Sbjct: 559 GYLPKLRASNNP--QDDARIENLLELHAVAEEFSLSEPDSRLADFLERISLVADTDQLPD 616 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 +G + +++ V + T+ + + F V + GM Sbjct: 617 QGSKEVAAKEMAPREPETNVSEASGDHPNPAPETKPEVTLMTVHTAKGLEFNTVFVTGME 676 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 DG++P + D +++R L A+ A+++LY++ Sbjct: 677 DGLFPHSRS------------LDDPEAIEEERRLAYVAVTRARRQLYLTRAAARTVFGDT 724 Query: 742 --RFPSVLVQELIDYIGQSHYLPGD 764 S + ++ + D Sbjct: 725 MNMPASRFLNDIPAQYVDNRRELTD 749 >UniRef50_P03018 DNA helicase II n=409 Tax=cellular organisms RepID=UVRD_ECOLI Length = 720 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 69/525 (13%), Positives = 137/525 (26%), Gaps = 79/525 (15%) Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASW 303 W + P L R ++ + L G VG+ + + Sbjct: 197 HELW--LNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIY 254 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SR 360 G G + F++ P ++ + N A + E Sbjct: 255 GWRGAQVEN----------IQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 I+ + + E + +R+ +D + ++ Sbjct: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW--QDNGGALAECAILYRSNAQ--- 359 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 V A +PY I ++ +S L L +R +++ P Sbjct: 360 --SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP--- 414 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 R D + Q T +L A Sbjct: 415 ---------------------TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKA---- 449 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 +G A + L+ L + + + Sbjct: 450 ------------LAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQE 497 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 + + + +E+ A + D +PL L+ V Sbjct: 498 KGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH--AALEAGEGQADTWQDAVQ 555 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + TL + + F V ++GM +G++P Q++ + R +++R L + Sbjct: 556 LMTLHSAKGLEFPQVFIVGMEEGMFPSQMS------------LDEGGRLEEERRLAYVGV 603 Query: 721 ISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPG 763 A QKL ++Y E PS + EL + + L Sbjct: 604 TRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRA 648 >UniRef50_D1A297 ATP-dependent DNA helicase PcrA n=3 Tax=Actinomycetales RepID=D1A297_THECD Length = 768 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 90/723 (12%), Positives = 175/723 (24%), Gaps = 154/723 (21%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA----------WQA--------PL 168 L+ + A L + V+ LA T + E W L Sbjct: 43 LTHRIAYLLAERDVHPAQILAITFTNKAAGEMRERVQALVGPRSGAMWVMTFHSACVRIL 102 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQ 228 + + A+ + P P + F +S L L + Sbjct: 103 RREARRLGFPSNFSIYDAADAQRLMALVCRELDLDPRRYPPKSFSAQVSNL-KNELIDYE 161 Query: 229 ALGKHIEIHL--LFTNPCRYYWGDIKD--------------------PAYLAKLLTRQRR 266 A HL Y ++ P R R Sbjct: 162 AFKARASTHLEQKLAEAYEMYQARLQQAGAMDFDDLIMTTVHLLQAFPEAAEHYRRRFRH 221 Query: 267 HSFEDRELPLFRDSENAGQLFN-------SDGEQDVGNPLLASWGKLGRDYIYLLSDLES 319 ++ + E L VG+ + + G +L Sbjct: 222 ILVDEYQDTNHAQYELVRLLTESPGEDVGPAELCVVGDADQSIYAFRGATIRNILE---- 277 Query: 320 SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN-IEEFSRSDNKRPLDPLDSSITF-- 376 F PD ++ + + A IE + KR Sbjct: 278 ------FERDFPDATTILLEQNYRSTQTILSAANAVIERNAHRKPKRLWSDQGEGEKIVG 331 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 +V + E + + + + P D+ V VF LP Sbjct: 332 YVADNEHDEAAFVAAEVDRLTDAG-LARPGDVAVFYRTNAQ-----SRVFEEVFIRVGLP 385 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 Y + + ++ L + + + + +L+VP Sbjct: 386 YKVVGGVRFYERKEVRDLLAYLRVLANPADTVSLRRILNVP------------------- 426 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 + + +A W+++ ++ G+ Sbjct: 427 ------------------------RRGIGDRAEACVEAHAARERITFWEALRTPEQVPGM 462 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETEAAMTLIEQ 614 + + ++ R A P E V + L + + Sbjct: 463 APRSAKAVREFVALMDDLRERAATATPAELIEAVLTETGYLAELQNSRDPQDETRIENLR 522 Query: 615 QWQAIIAEGLGAQYGDAV---------------PLSLLRDELAQRLDQERIS-------- 651 + +A+ E L ++++ D + I Sbjct: 523 ELEAVAREFEDRLAERVPAAEEEEEEAPSGAAGRLVDFLEQISLVADADAIPGTKGAPIP 582 Query: 652 -----QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR 706 G V + TL + + F VV L GM DGV+P A Sbjct: 583 PGERAPEDEQGVVTLMTLHTAKGLEFPVVFLTGMEDGVFPHLRAMSN------------P 630 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGD 764 +++R L + A+Q+LY++ + + S + E+ + + Sbjct: 631 QELEEERRLAYVGITRARQRLYLTRAVMRSAWGAPQVNPASRFLSEVPSSLVKWEREAAM 690 Query: 765 EAL 767 A Sbjct: 691 PAP 693 >UniRef50_C0R2D4 ATP-dependent DNA helicase n=4 Tax=Brachyspira RepID=C0R2D4_BRAHW Length = 659 Score = 227 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 62/512 (12%), Positives = 147/512 (28%), Gaps = 77/512 (15%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL--FNSDGEQDVGNPLLASWGKLGRD 309 ++ L R + ++ + + + L + VG+ + + G D Sbjct: 193 QENKVLNYYRNRFKYILVDEFQDTNPQQYKLIKLLTQDAENDLTVVGDDDQSIYAFRGAD 252 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL---ELENRAVAGVNIEEFSRSDNKRP 366 + +L F P+ + ++ + ++ A++ + N Sbjct: 253 VLNILD----------FEKDYPNTKIVRLEENYRCPKDIVEAALSVIKNNSNRHEKNVFS 302 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 P + I +C+S E + + + ++ D RDI+V+ + Sbjct: 303 NKPNEFKIENWICYSDLEEARSVVNEIESLF--DNGFEARDIVVLFRTNSQ-----SRAY 355 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 + Y I ++ IS L L + V ++VP Sbjct: 356 EKELRLHSINYKIVGGVGFFERIEIKDSISFLRLMTGFGDNFSVRRTINVPP-------- 407 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 R + + + T + + + A ++ Sbjct: 408 ----------------RGIGEKSFNNFETFANSRKLTLYNAIDYIDESGLSKKAILNIKA 451 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 E + + + +E ++ F + + Sbjct: 452 YKNIIEEYAVKIKEDIINEDGIH--------------IELLFFEFLKDIDYFSIFKGDGN 497 Query: 607 AAMTLIEQQWQAIIA-EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLM 665 + E+ + + L + L ++ + V + T+ Sbjct: 498 ERVITAEENIKELFRGFYDYKSMEANATLITFLE--ENTLYRDLNTNDEKEDYVTLMTIH 555 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + F VV + GM GV+P + + D++R L + A++ Sbjct: 556 NAKGLEFDVVFMTGMEQGVFPHYFS------------LEEEKGIDEERRLCYVGITRARR 603 Query: 726 KLYISYIGRSIQDNS--ERFPSVLVQELIDYI 755 KLY++Y + E+ PS + E+ + Sbjct: 604 KLYLTYSKKRRVSTGIMEQIPSSFLLEIPKKL 635 >UniRef50_B7C8B0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8B0_9FIRM Length = 725 Score = 227 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 69/523 (13%), Positives = 140/523 (26%), Gaps = 75/523 (14%) Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSD 316 K R ++ + L + VG+P + G +L Sbjct: 208 EKWQNRLDYIHVDEFQDVDPIQYGIIKLLTGKNTHLCVVGDPDQTIYTWRGASVDIILK- 266 Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSS 373 F + + + A + + + P D Sbjct: 267 ---------FNKDFEPCKTVILNENYRSTQPILDASNAVIKYNKERIDKDLYTKLPGDEK 317 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 IT E + ++ + L +D+ ++ + F Sbjct: 318 ITMFEGKEDSEEPIFVARQINEKHK--KGLEYKDMAILYRSN-----YSSRAFERIFKSV 370 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY I ++ + L L +R + Sbjct: 371 GIPYVIYGGIRFYERQEIKDALCYLRLCTNRNEEDPDQM--------------------- 409 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 ++ L + + L A E + + Sbjct: 410 --------------ALDLAVLRVINVPRRGIGARTIENLQKQAAERHMNLYDVMKDPIGL 455 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 S + + L+ L R A E L+ L + D E+ Sbjct: 456 STAVTKKCEMFVDLIEDLRENREHYALEDFLDYVLD--TTGYISMLKEDRESGQDRIDNL 513 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 ++ + + L ++A D+ + V++ T+ + + F Sbjct: 514 KELKE--DIAQSMIEDPEMTLESYLQDIALFTDKTQ---ETSENTVSLMTVHAAKGLEFD 568 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY-I 732 V L+ NDGV+P A G +++R L A+ A++ LYI++ Sbjct: 569 TVFLVNFNDGVFPSSRACD----------EGGMKALEEERRLLYVAMTRAKKTLYITWNT 618 Query: 733 GRSIQDNSERFPSVLVQELI-DYIGQSHYLPGDEALNCDESEA 774 G S ++ + PS E+ +YI Q + S++ Sbjct: 619 GFSYMQDAFKTPSRFRAEIPMEYIVQEEKEEAPKQPKAVVSQS 661 >UniRef50_C3RQ43 ATP-dependent DNA helicase n=4 Tax=Bacteria RepID=C3RQ43_9MOLU Length = 714 Score = 227 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 59/502 (11%), Positives = 155/502 (30%), Gaps = 81/502 (16%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 P L K + + ++ + + + VG+P + G + Y+ Sbjct: 203 PDVLEKWQHKFQYIHVDEFQDVGNIEYRLVKLMSQDAITCVVGDPDQTIYSFRGANVNYI 262 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILEL---ENRAVAGVNIEEFSRSDNKRPLDPL 370 L F + + N + + + + Sbjct: 263 LD----------FDKDFKPCKTVILDQNYRSTGNILNISNSLIRKNRNRLEKDLYTEATG 312 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 S + ++ S Q E + + ++ ++ E + RD ++ + ++ + Sbjct: 313 GSEVIHYMGKSEQEEADYICSQIEKIISEVDGVNYRDFAILYR-----ANYLSRTIEQSM 367 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 + Y I S ++ +S L L + +++VP I ++ L Sbjct: 368 ISHGIDYRIFGGLKFFSRKEVKDALSYLQLVCNDED-LAFERIINVPA----RGIGKKTL 422 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 ++ A+ + ++++ + Sbjct: 423 ENIQ---------------------------------------LVALNNQVSLYEALTLF 443 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 + L ++ + +L+ + ++ PL E + + + + E Sbjct: 444 SDQIKLSSKAKKEIITLVKAVETAKQ---SSLPLHEMFENLMNDVGYIDMLKKDLEDNRI 500 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 + Q I E + E++ D + + V++ ++ + + Sbjct: 501 DNIHELQRSIYEFQNQNPD-IATIENYLQEISLYTDNDNLD---DGQYVSLMSIHMAKGL 556 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 F V +LG+++G++P A D +++R L A A+++L+++ Sbjct: 557 EFDYVFVLGLSEGIFPSFRALSESD-----------EGLEEERRLAYVAFTRARKQLFLT 605 Query: 731 YI-GRSIQDNSERFPSVLVQEL 751 G S +S + S + E+ Sbjct: 606 DSEGFSFVTDSPKISSRFIDEI 627 >UniRef50_D0LIZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIZ3_HALO1 Length = 688 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 68/559 (12%), Positives = 153/559 (27%), Gaps = 74/559 (13%) Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 P Y +AL+A LL + D A+ + R ++ + Sbjct: 175 PRYQEALRAYAAVDFDDLLTATVRMFDQRD----DVRARWQEKFRFVMVDEYQDTNRAQL 230 Query: 281 ENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQ 339 + L VG+ + + G D +L F + P + ++ Sbjct: 231 KFVKTLVAEHENLCVVGDDDQSIYSWRGADPTNILH----------FDRMFPGARVIKLE 280 Query: 340 SDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 + A + N + I + E + + + Sbjct: 281 QNYRSTPTILRAANAVIANNVNRHGKNLWSDIADGAKIVHASATDTESEARFVAREIGDI 340 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + D L RD+ V+ + + +PY + + ++ I+ Sbjct: 341 VGTD-NLRYRDVAVLYRSN-----IQSRLIEESLRSASIPYVMYGGQQFYERKEVKDLIA 394 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 L L ++ + +++ P I L+ + S Sbjct: 395 YLRLALNQRDEIALRRVINYPA----RGIGATTLKRVEDHARASRTSMWR---------- 440 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 + ES + V + + + + R Sbjct: 441 --------------------------ILEGASQMAESDKMRPSTVQAIENFVAIIERTRA 474 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAET--EAAMTLIEQQWQAIIAEGLGAQYG--DAV 632 L + + D + + + AA ++++ Q Sbjct: 475 SLDGGARIIDVTRRLIDEIQLYDDLRNASPSAAAAQRRIDNVESLLRSLERHQEKRPGLG 534 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L+ L+ ++ E V + TL + + F +V ++G+ + + P Sbjct: 535 ALAEYLRRLSLAVESEAG--EDPGNKVVLTTLHGAKGLEFPIVFMIGLEEEILPHARTLK 592 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQE 750 + ++R L + AQ+KLY++ + R PS +QE Sbjct: 593 PQATDVMD--LDHVTDVSEERRLAYVGITRAQRKLYLTRTQVRVSRGKNLPRTPSRFLQE 650 Query: 751 LIDYIGQSHYLPGDEALNC 769 + + + + +E Sbjct: 651 IPAELLEERDIQAEERAPV 669 >UniRef50_A9WKU6 DNA helicase II n=2 Tax=Bacteria RepID=A9WKU6_RENSM Length = 797 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 69/687 (10%), Positives = 161/687 (23%), Gaps = 103/687 (14%) Query: 157 GLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGI 216 ++ + + L + Q I L++ + Sbjct: 139 DSADSLRLITLIARGLDLDPKRFAPKA------MQHKISALKNELIDDDAFAATATDPFE 192 Query: 217 SALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL 276 + VY Q L + + W P R R ++ + Sbjct: 193 QGVAEVYRGYTQRL-RQANALDFDDLIAQTVWLFRAFPGVADYYRRRFRHVMVDEYQDTN 251 Query: 277 FRDSENAGQL--------FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVD 328 ++ VG+ + + G D ++ F Sbjct: 252 HAQYALVKEIVGPAEGSGDEPAELTVVGDSDQSIYAFRGADIRNIVE----------FEK 301 Query: 329 VTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQRE 385 P+ ++ + + A + + I +V + E Sbjct: 302 DYPNARTIKLEQNYRSTQTILSAANAVIEKNPDRPVKRLWTAEGDGEKIIGYVAENEHEE 361 Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 + + + + +++ P D+ + LPY + Sbjct: 362 ARFIAEEIDRL-QDEADFRPGDVAIFYRTNAQ-----SRSIEEILMRVGLPYRVVGGTRF 415 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 ++ ++ L + + ++ +L+ P R Sbjct: 416 YERKEIKDALAYLRVLVNPEDDVNLRRILNEP------------------------KRGI 451 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 D L + ++ L + V Sbjct: 452 GDRAEGAVAALAERERSSFMAALRH----------------AEDAPAIATRSLNAVNGFV 495 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 L+ L LE L + D + E+ + + + + Sbjct: 496 KLIDDLTEVASTSGAATALEAVLEQTGYLETLRASSDPQDESRVENLAELVAVVREYERD 555 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLAGP------------VNICTLMPMRSIPFK 673 L+ + +A D ++I + V + TL + + F Sbjct: 556 ---KPEGSLTDFLEGVALVADADQIPDAPGSDTEAAVAEARRLGVVTLMTLHTAKGLEFP 612 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 V L GM G++P+ + D ++R L L A+++LY++ Sbjct: 613 AVFLTGMEHGIFPQARS------------ATDAKELAEERRLAYVGLTRARKRLYLTRAE 660 Query: 734 RSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 + S + E+ + + A+ S + + H Sbjct: 661 VRSLWGQSQYNPASPFIDEVPANLIEWKREGMSRAIPSIGSSGFGRDRYSGSHWGAGSAV 720 Query: 792 QNYQPGERQSYAREWLPAASQAGKAHS 818 G+ + Sbjct: 721 GGRDAGQLPPSLATRSARVQPQKEIPQ 747 >UniRef50_Q21PD1 ATP-dependent DNA helicase Rep n=15 Tax=Gammaproteobacteria RepID=Q21PD1_SACD2 Length = 672 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 77/633 (12%), Positives = 171/633 (27%), Gaps = 91/633 (14%) Query: 164 WQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVY 223 Q + E + G +L Q I ++ P S+ G V+ Sbjct: 110 DQEDARGLIKEIMLKDGDTNTDMIDLVQSQISNWKNGLIEPDEALSKAQSEGEQTWALVF 169 Query: 224 LQALQALGKHIEIHL--LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSE 281 + +AL + + L P + + P L + R R ++ + + Sbjct: 170 ERYNKALKAYNAVDFDDLIRLPSKLFSEH---PEVLNRWQQRIRYLLVDEYQDTNSSQYK 226 Query: 282 NAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS 340 QL VG+ + + G + + P + ++ Sbjct: 227 VVQQLIGDRGTLTVVGDDDQSIYAWRGA----------RPENMSLLKVDFPSLHVIKLEQ 276 Query: 341 DILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 + A + + +I C + E E + +L Sbjct: 277 NYRSTARILKAANVLIANNPHEFDKTLWSDLGMGETIRVIKCPTEDAEAERVATEILTQR 336 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 +D V+ + +PY IS + + ++ + Sbjct: 337 LR-RQCKFKDFAVLYR-----GNHQARLMELKLQHHQIPYNISGGTSFFARAEIKDIMGY 390 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L L + L +++ P R I L L + Sbjct: 391 LRLIANPADDNAFLRVVNTP----RRQIGTGTLEALGR---------------------- 424 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 Y+ E W + + + + + + LN R Sbjct: 425 -----------------YSTERDISLWAACDEMGLQALIPKQGLERIRKFSGWLNSVRSN 467 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETE--------AAMTLIEQQWQAIIAEGLGAQYG 629 P++ + D+ +L + + ++ + + + Sbjct: 468 CHNGDPVQAIREMIDDIDYEGWLHQNASSPKVAEKRFENVNILVESIKNSLERDENEDAD 527 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 ++ +L + ER + V + TL + + F V LLG+ + + P + Sbjct: 528 GEERINTAISKLLLQDMLERQEEEDETDRVQLMTLHASKGLEFPHVFLLGLEEEILPHRN 587 Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVL 747 + + +++R L + AQ+ L ++ G Q ++ PS Sbjct: 588 SI-------------EEDNIEEERRLAYVGITRAQRTLTMTLAGTRKQFGEKQTTTPSRF 634 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 + EL + ++ + L Sbjct: 635 LDELPPEDVEREGFSEATPEQIEKKGKETLSSL 667 >UniRef50_A4RXK7 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RXK7_OSTLU Length = 657 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 62/503 (12%), Positives = 134/503 (26%), Gaps = 80/503 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIY 312 P + R + ++ + E +L VG+ A +G G + Sbjct: 192 PDVRSYYEHRWSQVLVDEFQDTSTTQYELIRKLSQPQGSVFVVGDADQAIYGWRGAEVAN 251 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE---FSRSDNKRPLDP 369 + + F + D H + ++ A + + F + P Sbjct: 252 IRTQ---------FDEDFKDVQTHMLTTNYRSTATIVEAAQAVIKESAFPSPLDLVANTP 302 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + + + E E + ++EDP L +I V+ V A Sbjct: 303 GGRDVAIVEANDDREEAEFIALEARKSVKEDPDLRYSEIAVLYRTNSQ-----ARVLEEA 357 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +P+ + + ++ I+ L + + + + +++ P I Sbjct: 358 FIRAGVPHKVIGDTSFYGRKEIKDMIAYLRVVSNSADTVSLNRIINTP----TRGIGNST 413 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + L W++ G +LP Sbjct: 414 IEKLSAWIDTLPKTDGT---------------------------------------ELLP 434 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 E GL + + R P E + + + DA+ Sbjct: 435 SAEEMGLTTRARSAVLKFSQLMAETREKAKSSTPGELLEAIIKCTGYDTLVQDADDGNER 494 Query: 610 TLIEQQWQAIIAEGLGAQYG------DAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 Q+ + E L + + L + V + T Sbjct: 495 WAFVQELINLAKEPPQDIDETIQDRVGLEALGSFLEGI-SLLTSAESKEEEGGDTVKLMT 553 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISA 723 + + + F V + G+ +G+ P D D++ LF + A Sbjct: 554 MHASKGLEFNSVFISGVEEGLIPFVRNGDSEDDQ------------DEEVRLFYVGITRA 601 Query: 724 QQKLYISYIGRSIQDNSERFPSV 746 ++KL + + + P+ Sbjct: 602 KRKLMLCHARERRRFGQSAQPAR 624 >UniRef50_Q67KI7 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67KI7_SYMTH Length = 825 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 68/571 (11%), Positives = 145/571 (25%), Gaps = 82/571 (14%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIY 312 + ++ + + L VG+ + G D Sbjct: 246 DDVREYYQRKFEYILVDEYQDTNHVQNRWVFLLAGEKQNLAVVGDDDQGIYSWRGADISN 305 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAG---VNIEEFSRSDNKRPLDP 369 +L F P ++ + +N A V + Sbjct: 306 ILE----------FEAQFPGCRTIKLEQNYRSTQNILSAAYAVVRHNTGRKEKRLWTAAG 355 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEE----DPTLTPRDIIVMVADIDSYSPFIQAV 425 + + E + + ++ E L +D V+ Sbjct: 356 PGDPVYHFTAADERDEAAFVAREVERLVAEGLPDGTRLDYQDFAVLYRTHAQ-----SRA 410 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 A R +PY I ++ ++ L + + + VP + I Sbjct: 411 LEEAMVRRSIPYGIYGGLRFFERKEIKDVLAYLRIIANPADIVSFRRAVGVP----KRGI 466 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 + L + + + + + Sbjct: 467 GPATVDKLVDYAEQWQVPVALAALDCS--------------------------------- 493 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 SG + + +L+ +L + ++ L +L + Sbjct: 494 ---MVPGLSGTYQKRMEEFGALIEELTNLSAHCTVGQLIDAVLER-TGILEELRADTSLE 549 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ-RLDQERISQRFLAGPVNICTL 664 AA Q+ +++ AE + L L LA L + V + TL Sbjct: 550 AAARLENVQELRSMAAEFEPPAGEELDGLRDLDSFLATVALLTDADQVGEGQNKVTLMTL 609 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + + F VV L+G+ +GV+P D + +++R L + A+ Sbjct: 610 HSAKGLEFPVVFLVGLEEGVFPHN------------RALTDEVQMEEERRLCYVGMTRAR 657 Query: 725 QKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 +LY++ + PS + E+ + + + + A Sbjct: 658 LRLYLTNAVSRNLWGQSNYNAPSRFLLEIPAELVEEVTPAAGASGPRRSAWDDGAAW--- 714 Query: 783 LHTRMPFDPQNYQPGERQSYAREWLPAASQA 813 + G R + REW Sbjct: 715 EDAGAAVRRPAWDGGARAARRREWEDDDFSP 745 >UniRef50_UPI0001C3187F UvrD/REP helicase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3187F Length = 746 Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats. Identities = 84/631 (13%), Positives = 167/631 (26%), Gaps = 89/631 (14%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 Q+ L K +E + A ++ I ++ V + Sbjct: 122 DQSDARRLVKRAIEELDVDPKRFTPGAIHHE--ISDAKNKLRDAEAYAQMVGSFFEQTVA 179 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 VY L + + ++ P + R ++ + Sbjct: 180 DVYKLYESELHRMNAMDFDDLLVRAVNVLELF-PEVRRRYADNFRHVLVDEYQDTNHVQY 238 Query: 281 ENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQ 339 + VG+ + +G G D +L F D PD + ++ Sbjct: 239 RWLQLIAGEHRNLAVVGDDSQSIYGFRGADIRNILD----------FEDDFPDAKVVKLE 288 Query: 340 SDILELE---NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 + + + A A + R + I E + + + Sbjct: 289 QNYRSTQTILDAANAVIRNNRGQREKELWTDLGIGDPIKVRELDDEHAEARFVAGEIERI 348 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + D ++ +I V V + Y + ++ I+ Sbjct: 349 V--DEGVSRNEIAVFYRTNAQ-----SRVLEDTLVRAQIGYQVIGGTKFYERAEIKDAIA 401 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 L++ + + + P R I + L + W N +GI Sbjct: 402 YLTMLVNPQDVVSFTRIANSP----RRGIGQTSLSRVISWANTAGI-------------- 443 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 W++ L D GL + + I Sbjct: 444 -------------------------TIWEAALEPDSVPGLGTAARKSFHRFMGAMRILGE 478 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY-----GDA 631 A P+ E L +A+ + + ++ +A Sbjct: 479 RAAANPPVSELLKEVLSESGYLEALEADRTIESQGRIENLEELVNVAAEYDGSVDLREEA 538 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 L+ ++A D + +R G V + TL + + + +V LLG +GV+P Q A Sbjct: 539 PSLAGFLQQIALVADAD--GRRDDEGLVTLMTLHNAKGLEYPIVFLLGCEEGVFPHQRAI 596 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQ 749 L ++ L A + LY++Y S + S V Sbjct: 597 EEGGLEEERRLA-------------YVGLTRAMRDLYMTYARTRAVFGSRSYGARSRFVD 643 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 E+ + + P + E L Sbjct: 644 EVPIGLTDRNERPSLGVGSARERATSWSTPL 674 >UniRef50_C3QGR5 ATP-dependent DNA helicase n=23 Tax=Bacteroidales RepID=C3QGR5_9BACE Length = 792 Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats. Identities = 86/712 (12%), Positives = 201/712 (28%), Gaps = 101/712 (14%) Query: 127 LSSKAADLFDQYLVYRP-DWLAQWETGHLVEGLGEAQAWQ------APLW---------K 170 L+ K A L +Q Y P + LA T + E A Q LW + Sbjct: 38 LTYKIAYLLEQENGYNPWNILALTFTNKAAREMKERIARQVGMERARYLWMGTFHSIFSR 97 Query: 171 ALVEYTHQLG-------QPRWHRANLYQRFIET--LESATTCPPGLPSRVFICGISALPP 221 L +G +L + I+ L+ T P + +R+ + P Sbjct: 98 ILRAEAQYIGFTSQFTIYDTADSKSLLRSIIKEMGLDEKTYKPGVVQARISNAKNHLVTP 157 Query: 222 VYLQALQAL--GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 A + G + YW + + + + Sbjct: 158 TGYAANKEAYEGDMAAKMPAIRDIYTRYWDRCRQAGAMDFDDLLVYTYILFRDFPDVLTR 217 Query: 280 SENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFV-----------D 328 ++ D QD + +L ++ + + +Q + +F Sbjct: 218 YQDQFHYVLVDEYQDTNYAQHSIILQLTKENQRICVVGDDAQSIYSFRGADIDNILYFTK 277 Query: 329 VTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQRE 385 + P+ + ++ + + A ++ E I +S E Sbjct: 278 IYPNTKVFKLEQNYRSTQTIVCAANSLIEKNERQIRKAVFSEKEKGEPIGVFQAYSDVEE 337 Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 +++ +++ + + + ++ +F A R +PY I + Sbjct: 338 GDIVANKIAEL-RREYHYGYAEFAILYRTNAQ-----SRIFEEALRKRSMPYKIYGGLSF 391 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR-W 504 ++ I+ L + E +++ P I + + + G+ W Sbjct: 392 YQRKEIKDVIAYFRLVVNPNDEEAFKRIINYPA----RGIGDTTVGKIISAATNHGVSLW 447 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 + + G H G ++ G+ + A E I G + Sbjct: 448 AAVCEPLSYGLDINKGTHAKLQGFRELIEGFIADQAD------KNAYEIGTDIIRQSGII 501 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 + + L+++ +EE + D Sbjct: 502 NDVCQDTSP--ENLSRKENIEELVNGMNDFC--------------------------ALR 533 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 + V L+ E+ L + + V + T+ + + FK V ++G+ + + Sbjct: 534 QEEGNPNVSLTDFLSEI-ALLTDQDSDKADDGEKVTLMTVHSAKGLEFKNVFVVGLEENL 592 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER-- 742 +P + +++R LF A+ A++ Y+S+ + Sbjct: 593 FPSGMVGDS------------PRALEEERRLFYVAITRAEEHCYLSFAKTRFRYGKMEFG 640 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 PS ++++ + + G + + + + Sbjct: 641 SPSRFLRDIDVDYLRLPHEAGVSRAVDEGAGRFRREIEGGFARSTSPSRAPF 692 >UniRef50_B0MNA1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MNA1_9FIRM Length = 792 Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats. Identities = 90/767 (11%), Positives = 209/767 (27%), Gaps = 131/767 (17%) Query: 99 LPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGL 158 + +L + + + +L + D F + + +++F + V + LA T L Sbjct: 66 VRELSDDDV-AFAQSFLAGEIDN---FDAAERLSEIFGEDRVKPWNILAVTFTNKAAAEL 121 Query: 159 GEAQ----AWQAPLW---------KALVEYTHQLGQPRWHRANLYQR------FIETLES 199 E A +W + L + +LG +Y ++ Sbjct: 122 KERLENMGADVDGIWAATFHSACVRILRQDIEELGMGYKSNFTIYDTDDQLKVIKTVMKE 181 Query: 200 ATTCPPGLPSRVFICGISA-----LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDP 254 + + IS + P G Y ++ Sbjct: 182 HNISDKAVTPKAVQNLISRSKDKLITPDKFSTKGKNGSDDYQLSTAKTIYTDYQARLEAA 241 Query: 255 AYLAK--------------------LLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQ 293 L R R ++ + + L Sbjct: 242 NALDFDDIIMLTVKLFAHCPDVLSHWQNRFRYIMVDEYQDTNAAQYKLVSLLAEGSGNLC 301 Query: 294 DVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 VG+ + + G +LS F + + ++ + A Sbjct: 302 VVGDEDQSIYRFRGATIENILS----------FEEQF-GAEVIKLEQNYRSTATILKAAN 350 Query: 354 NIEEFS---RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV 410 + + + N I + Q E + +R+L +++ D ++ Sbjct: 351 AVIANNTQHKDKNLWSDLGDGDKIRMDRFSTEQEEAMFITERILDGVKQGK--KYADHVI 408 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 + + + A +PY I ++ I+ L + ++ + Sbjct: 409 LYRNNAQ-----SRTVETTLAKSGIPYKIIGGVRFYERKEIKDIIAYLCVLNNNYDEVRF 463 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 +++ PV I L L + V+ GI + + Sbjct: 464 GRIVNEPV----RGIGAATLDELNRVVSGMGISY-----------------------VQA 496 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 M ++ S + + ++P E+ +L+ ++ +++ L Sbjct: 497 MCESDSLPSLSRKAKVLVPLGET--------------FSELSQHTDDISDGSLIDDILDR 542 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 A E E + I + +I + LS +++A D + Sbjct: 543 F-GYREAMQRQGLEGEVRLENINELKSNMITFAKENEGAG---LSEFLEQVALVSDMDSF 598 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 + T+ + + F V ++G + ++P + D + Sbjct: 599 --EADDDKAVLMTMHSAKGLEFDTVFVVGAEENIFPGYRSQF------------DPMEIE 644 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALN 768 ++R L A+ A++ LY + + + S V E+ A Sbjct: 645 EERRLAYVAITRAKRHLYFTCAKQRMLYGQTMRNKVSRFVVEIPSQYMAYDDHTAVTASA 704 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 S ++K + L + + E++ + P Sbjct: 705 AARSAEQMKPRTSYLQQQQRSYHAEQREMEKRVENVSYAPGERVHHG 751 >UniRef50_Q1J014 UvrD/REP helicase n=4 Tax=Deinococci RepID=Q1J014_DEIGD Length = 741 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 88/683 (12%), Positives = 180/683 (26%), Gaps = 128/683 (18%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAP----LW---------KALV 173 L + A L Y V + LA T + E LW + L Sbjct: 42 LVYRIAHLIGHYGVDPGEILAVTFTNKAAAEMRERARHLVEGADRLWMSTFHSAGVRILR 101 Query: 174 EYTHQLGQPRWHRANLYQRFIETLES---------ATTCPPGLPSRVFICGISALPPVYL 224 Y +G R ++ L+ A T P L + + L P L Sbjct: 102 AYGEHIGLKRGFVIYDDDDQLDILKEIMGSIPGIGAETHPRVLRGILDRAKSNLLTPADL 161 Query: 225 Q-----ALQALGKHIEIHLLFTNPCRYYWGDIKD---------------PAYLAKLLTRQ 264 + L + + R + D PA L ++ R Sbjct: 162 ARHPEPFISGLPREVAAEAYRRYEARKKGQNAIDFGDLITETVRLFQEVPAVLERVQDRA 221 Query: 265 RRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQEL 323 R ++ + E L + D VG+P + + G D +L Sbjct: 222 RFIHVDEYQDTNKAQYELTRLLASRDRNLLVVGDPDQSIYRFRGADIQNILD-------- 273 Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCH 380 F D ++ ++ + + E RP+ + FH Sbjct: 274 --FQKDYLDAKVYMLEQNYRSSARVLTIANKLIENNAERLEKTLRPVKEDGHPVLFHRAT 331 Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 + E + + + L + + D+ V+ V + +P I Sbjct: 332 DQRAEGDFVAEWLTRLHA--EGMRFSDMAVLYRTNAQ-----SRVIEESLRRVQIPAKIV 384 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 ++ ++ L + + ++ P + I + L L +W + Sbjct: 385 GGVGFYDRREIKDVLAYARLAINPDDDVALRRIIGRP----KRGIGDTALERLMEWARVN 440 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 G +L A + Sbjct: 441 GTS---------------------------ILTACAHAQELNILE-------------RG 460 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 ++ + P V + + + + + ++ Sbjct: 461 AQKAVEFAGLMHAMSEAADNDEPGPFLRYVIETSG--YLDLLRQEGQEGQVRLENLEELV 518 Query: 621 AEGLGAQYGDAVPLSLLRD--ELAQRLDQERISQRF---LAGPVNICTLMPMRSIPFKVV 675 + + + D L +D R Q V + TL + + F VV Sbjct: 519 SAAEEWSRENEGTIGDFLDDAALLSSVDDMRTKQENKDVPEDAVTLMTLHNAKGLEFPVV 578 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 ++G +G+ P + A + +++R LF + A ++L+++ Sbjct: 579 FIVGTEEGLLPSKNA------------LLEPGGIEEERRLFYVGITRAMERLFLTAAQNR 626 Query: 736 IQDNSERFP--SVLVQELIDYIG 756 +Q S ++E+ Sbjct: 627 MQYGKTLATEDSRFLEEIKGGFD 649 >UniRef50_C5VHV2 ATP-dependent DNA helicase PcrA n=20 Tax=Bacteroidales RepID=C5VHV2_9BACT Length = 851 Score = 225 bits (572), Expect = 9e-57, Method: Composition-based stats. Identities = 62/616 (10%), Positives = 166/616 (26%), Gaps = 82/616 (13%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDY 310 + K + ++ + + QL + VG+ + + G + Sbjct: 213 DNKEIREKYGQQFEYILVDEYQDTNYAQVSIISQLAETHRRICVVGDDYQSIYSFRGANI 272 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS---DNKRPL 367 +L F D L ++ + + A ++ + + + Sbjct: 273 DNILD----------FKHKFDDAKLFKLERNYRSTQLIVQAANSLMKHNERQIPKDVFSK 322 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + I + C+S + E V+ + L ++ + + ++ F Sbjct: 323 EAEGDKILYKPCYSDREEAMVVANELKR-IKRNDDCDYGNFAILYRTNAQ-----SRSFE 376 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + +PY I + ++ I+ L + E +++ P I Sbjct: 377 DEFRKQGIPYKIIGGLSFYQRKEIKDIIAYFRLVSNPNDEEAFRRIINYP----TRGIGN 432 Query: 488 EGLRYLRQWVNESGIR-WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME-SAQGEWQ 545 ++ + + + W + ++ G T F ++ G+ + + ++ Sbjct: 433 TTIQKIIDCAQRNSVSLWETILNPIQYGLDVNKGTMTKLFAFRTLISGFIKNVALKDAYE 492 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 E SGL A+ + E+ Sbjct: 493 LGKEIIEESGLSAD------------------IRSGSEPEDLARR--------------- 519 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLM 665 + Q + G + V L+ E+A D ++ V + T+ Sbjct: 520 -ENLEEFMSAMQGFVDSGREEGREENVYLTDYLQEVALYTDADKEDDDTPK--VTLMTIH 576 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + F V ++G+ + ++P ++ + +++R L A+ A++ Sbjct: 577 AAKGLEFPTVFVVGLEENIFPSPMSASS------------KREIEEERRLLYVAITRAER 624 Query: 726 KLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 ++ + S + PS + + + + + + Sbjct: 625 HCILTNAKNRFRYGSMQVDNPSRFLNDFDPALIHVEDEANSAFGGERRKMPWDEDNSSRN 684 Query: 784 HTRMPFDPQNYQPGERQ------SYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETL 837 N++ E + + + + Sbjct: 685 AWGRNRSEDNFREYEPNKAYTGSRPWGQEYRQMGSRWQNSNPVASQFRADPKPKITERKR 744 Query: 838 QRFWAHPVRAFFQMRL 853 P + RL Sbjct: 745 PEAAVDPFSERAKRRL 760 >UniRef50_A8HYL6 DNA helicase II n=8 Tax=Rhizobiales RepID=A8HYL6_AZOC5 Length = 835 Score = 225 bits (572), Expect = 9e-57, Method: Composition-based stats. Identities = 96/781 (12%), Positives = 200/781 (25%), Gaps = 129/781 (16%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA-----------WQ--------AP 167 L+++ A + Q Y LA T + E W Sbjct: 101 LTTRIAHILSQGRAYPSQILAVTFTNKAAREMKERIHAMVGDTVEGMPWLGTFHSIGVRI 160 Query: 168 LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRV---FICGIS--ALPPV 222 L + + G + + + + + P+R+ I G L P Sbjct: 161 LRRHHELVGLKSGFTILDTDDQLRLLKQLIAAEEIDEKRWPARMLASAIDGWKNRGLTPE 220 Query: 223 YLQALQALGKHIEIHLLFTNPCRYY--------WGDIK---------DPAYLAKLLTRQR 265 + A + + + +GD+ +P LA+ + + Sbjct: 221 QVPAGEGAAFANGRGQMLYAAYQARLKALNAVDFGDLLLEGIRLFRENPDVLAEYHRKFK 280 Query: 266 RHSFEDRELPLFRDS-ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELD 324 ++ + S VG+ + +G G + +L Sbjct: 281 YILVDEYQDTNVAQYLWLRLLAQGSRNVCCVGDDDQSIYGWRGAEVDNILR--------- 331 Query: 325 AFVDVTPDNLLHNIQSDILELENRAVAG---VNIEEFSRSDNKRPLDPLDSSITFHVCHS 381 F P + ++ + + A + E +T Sbjct: 332 -FESDFPGAKVIRLERNYRSTGHILAAASHLIAFNEGRLGKTLFSEGEKGEKVTVTGAWD 390 Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD 441 E + D + A+ L I ++V + F F L Y + Sbjct: 391 SGEEARAIGDEIEALQRAGHAL--SQIAILVR-----ASFQMREFEDRFVTLGLNYRVIG 443 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 + ++ L S +++VP + + + ++ +R +G Sbjct: 444 GPRFYERAEIRDALAYLRCVISPADDLAFERIVNVP----KRGVGDAAIKQIRDVARAAG 499 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 + ++ ES L +L Sbjct: 500 VP---------------------------------------LMEATRLLTESEELKPKLR 520 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 L + WR + E V D + + A + + ++ Sbjct: 521 STLRGFVQSFERWREQAENMK-HTELAEVVLDESGYTEMWQKDRSAEAAGRLENLKELVR 579 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 G + LS + ++ +D + V I TL + + F V L G Sbjct: 580 SMEGFE-----NLSGFLEHISLVMD---VDSGAGDDAVQIMTLHSAKGLEFDTVFLPGWE 631 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN-- 739 +G++P Q A + ++ K G +++R L + A+ + + Sbjct: 632 EGLFPHQRA------LDEQGKAG----LEEERRLAYVGITRARASARVYFASNRRIHGMW 681 Query: 740 SERFPSVLVQELIDYI--GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG 797 + PS + EL D Q + PF PG Sbjct: 682 NSTVPSRFLDELPDTHVDVQESKGGFGWGGTTGGYGGGNSYGASRFDNPAPFASSYATPG 741 Query: 798 ERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF-QMRLQVN 856 +++ ++ G S + + P + + Sbjct: 742 WQRAQNARNESGGTKGGFGGSGGGYGGSRRGGPVIEGTLIAASTGAPSAFSAGERVFHIK 801 Query: 857 F 857 F Sbjct: 802 F 802 >UniRef50_B2RKD8 ATP-dependent DNA helicase n=5 Tax=Bacteroidetes RepID=B2RKD8_PORG3 Length = 765 Score = 225 bits (572), Expect = 9e-57, Method: Composition-based stats. Identities = 77/606 (12%), Positives = 179/606 (29%), Gaps = 101/606 (16%) Query: 189 LYQRFIETL--ESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI------------ 234 L + ++ + + + R+ + + P A + L ++ Sbjct: 120 LLRHVMKRMNIDDKVYRLNAVQHRISMAKNQLISPESYAANKDLSRYDIDCRMPRMAEIY 179 Query: 235 --EIHLLFTNPCRYYWGDIKDPAYLAK--------LLTRQRRHSFEDRELPLFRDSENAG 284 L N + + L + R ++ + F A Sbjct: 180 SLYTILCKQNNAMDFDDLLFKINVLFRDFPDVLQTYRDRIDYLLIDEYQDTNFAQYLIAR 239 Query: 285 QLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL 343 QL G VG+ + + G +L F P + L ++ + Sbjct: 240 QLMGEKGKVFVVGDDAQSIYSFRGAKVENIL----------GFSKSFPGSKLFKLEENYR 289 Query: 344 ELE---NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 + N A + + E + I C S E + D ++ ++ Sbjct: 290 STQSIVNAANSLIAYNEGRIPKQVFSNKQVGERIRLTGCLSGYLEAYTVADSIVERRMQE 349 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 D ++ VF A +P+ I + S ++ ++ L Sbjct: 350 Y-CPYSDFAILYRTNAQ-----SRVFEEALRKHNIPFRIYGGLSFYSRKEIKDVLAYFRL 403 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR-WGIDDDNVRELELPAT 519 + E + +++ P + I + L L + S W + ++ + + Sbjct: 404 IVNPNDDEALRRVINYP----KRGIGDTTLSRLNEIATASSRSLWDVLSESQKGFPDLSA 459 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 ++ + ++ + SG+ AE+ + G++ Sbjct: 460 TARRRLGEFVSLIRELQESEYESLYEQAADVVKRSGISAEIFS---------DKSIEGIS 510 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 ++ L+E L + ++ + G+ L + Sbjct: 511 RQENLKELLNGIEEYGTSY--------------------------AEERGEKPSLGTFLN 544 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 E+ DQ+ V + T+ + + FK + ++GM + ++P + Sbjct: 545 EVVLLTDQDTEGVV--GDYVTLMTVHAAKGLEFKHIFIVGMEENLFPSMMN--------- 593 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQ 757 +++R LF A+ A++ +IS+ ++ PS +QEL D + Sbjct: 594 ----ATEQGLEEERRLFYVAITRAKESCHISFAAERSRNGRTERSRPSRFLQELDDAYVE 649 Query: 758 SHYLPG 763 Sbjct: 650 RRVPQE 655 >UniRef50_A6CC22 ATP-dependent DNA helicase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CC22_9PLAN Length = 755 Score = 225 bits (572), Expect = 9e-57, Method: Composition-based stats. Identities = 69/549 (12%), Positives = 153/549 (27%), Gaps = 82/549 (14%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 P A L R + ++ + + L + G+P + +G G Sbjct: 202 SPELRATLDERYQYILVDEYQDTNLAQYQIIMGLSLNTRNLCVTGDPDQSIYGWRGAKIE 261 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLD 368 +L F PD ++ + + A ++ + + + + Sbjct: 262 NILQ----------FERDFPDCKTIRLEQNFRSTKEILRVADDLISHNQRRKVKSLFTEN 311 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 S + + E + + R+ +++ D + + Sbjct: 312 EEGSPVELLCFQDERHEADDIARRIRNAVDQGKQ-EYTDYAIFYRVNS-----LSRELEL 365 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A A +PY ++ A ++ +S L L ++ +++ P+ I + Sbjct: 366 ALARHKIPYQLAGSVAFYERTEVKDLLSYLKLVNNPDDRVAFSRIVNKPL----RGIGKT 421 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L +W +E GI ++ Sbjct: 422 TQNKLIRWADERGI---------------------------------------SLLEAAH 442 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + L +A +N + +A + + D + A Sbjct: 443 QAADCPKLSKRAATMVARFAKMINGF--SMADSGSVAHLMENIIDSTRMVDSWKESPDEA 500 Query: 609 MTLIEQQWQAIIAEGLGAQ--YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 +++ YG+ L + L AG V + TL Sbjct: 501 DQQRIANVNELLSTAKKYDDIYGEETTLEGFLEV--STLASATDQLDTDAGRVTLMTLHA 558 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + + VV ++G+ + P + + R +++R LF + A+Q Sbjct: 559 AKGLEYPVVFIVGVEQNLIPHERV----------LREEFRDGLEEERRLFFVGITRAEQN 608 Query: 727 LYISYIGRSIQDNSE--RFPSVLVQELIDYI-GQSHYLPGDEALNCDESEARVKAHLTCL 783 LY++ S ++E+ QS + + DE VK Sbjct: 609 LYLTQTRERSMRGRPWRTITSDFLKEIDVEFNDQSTDELFESRSHFDEFVESVKRGEIDT 668 Query: 784 HTRMPFDPQ 792 +P+ Sbjct: 669 AALKAANPE 677 >UniRef50_Q31JE9 ATP-dependent DNA helicase UvrD n=3 Tax=Gammaproteobacteria RepID=Q31JE9_THICR Length = 741 Score = 225 bits (572), Expect = 9e-57, Method: Composition-based stats. Identities = 80/622 (12%), Positives = 173/622 (27%), Gaps = 81/622 (13%) Query: 160 EAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISAL 219 + W +A + + G+ H + ++ + R G+ Sbjct: 133 DDAQWPHKQVQAFINGEKEEGRRPHHIDPGHNPYVRQMVQIYQAYEEQCKR---AGLVDF 189 Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 + L+A W +K+P LA R R ++ + Sbjct: 190 AELLLRA------------------HELW--LKNPQVLAHYQARFRHILVDEFQDTNSLQ 229 Query: 280 SENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNI 338 L + VG+ + +G G + F + D + Sbjct: 230 YAWLRVLAGASGRLFIVGDDDQSIYGWRGAKIEN----------IRRFDEDFSDVKTVRL 279 Query: 339 QSDILELENRAVAGV---NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA 395 + + A + N I + + E + +++ + Sbjct: 280 EQNYRSTGTILKAANGLIAFNQDRMGKNLWSAGEEGDPIRIYEAFNELDEARYVCNQVES 339 Query: 396 MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 E+ + ++ V+ V A +PY + ++ + Sbjct: 340 WCEQGGSR--SEVAVLYRSNAQ-----SRVMEQALLQAQIPYRVYGGLRFYDRAEIKDVL 392 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 + L L + + + P I + +R+ I + + Sbjct: 393 AYLRLLVNTEDDAAFERVYNHPP----RGIGNKTADQIREVARMQEISLWQAATQMAQDG 448 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 L A + L+ + + V+ SGL + Sbjct: 449 LTARAKTAVNGFLSLIESLKDSTAELTLQDQVIQVISRSGLQLHFEKDTSE--------- 499 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 + LE + + + D +T + E + PL+ Sbjct: 500 ---QGQSRLENLDELINAVSVFKPVQDNDTVEGVVPEEAAMTEAFDQ-----PNFENPLA 551 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 L+ V + TL + + F +V ++G+ +G++P Q + Sbjct: 552 EFLA--QAALEAGEQQADQWESSVQLMTLHAAKGLEFPLVFMIGLEEGLFPSQQSQE--- 606 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELID 753 D R +++R L + A+++L IS+ R SE + PS ++E+ D Sbjct: 607 ---------DPYRLEEERRLAYVGITRAEKQLMISFANRRRMHGSEFYPLPSRFIKEIPD 657 Query: 754 YIGQSHYLPGDEALNCDESEAR 775 Q L G + + Sbjct: 658 DCVQMVRLSGSVKHYGETASHA 679 >UniRef50_D1VUE5 ATP-dependent DNA helicase PcrA n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUE5_9FIRM Length = 720 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 59/540 (10%), Positives = 152/540 (28%), Gaps = 86/540 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIY 312 P + + ++ + + VG+ + + G D Sbjct: 201 PDVREFYQNKFKYIFVDEYQDTNSIQYKLIKLFCGKAPNLTVVGDNDQSIYKWRGADISN 260 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR---SDNKRPLDP 369 +L+ F P + ++ + +N ++ + + S + Sbjct: 261 ILN----------FQKDFPGAKIIKLEQNYRSTQNILDVANSVIKNNPQELSKSLWTKRQ 310 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + + E + +++L + + D+ ++ F + Sbjct: 311 GGEKVYYKEFSVSNEEEFAVTNKILGL--NYKGYSFEDMAILYRTNAQ-----SRGFEES 363 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + + Y I ++ ++ L + ++ +L +++ P + I + Sbjct: 364 LSREGINYKIVGGLRFYDRAEVKDIMAYLKVINNPLDEIALLRIINKP----KRGIGDSS 419 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + +R YA+ + ++ + Sbjct: 420 VEKIRD---------------------------------------YAINNNLSMFEVIKN 440 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + L ++ S +N+ + E + D + Sbjct: 441 IENYEDLNVRAKKNIKSFANLINLLIER-KDLLNVGELAELVVDESQYVEDLKNQNTLEA 499 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 +I+ Y LS ++ D ++ S A VN+ T+ + Sbjct: 500 RTKISNIDELISNI--MSYDKETSLSDYLSNMSLLTDIDKTS---DAKGVNLMTVHAAKG 554 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + FK+V L+GM +G++P D+ + R L A+ A+ L+I Sbjct: 555 LEFKIVFLVGMEEGLFPIIRQDEDEDIEEE-------------RRLCYVAITRAEDLLFI 601 Query: 730 SYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 S + S + E+ D I + ++ + ++ +T Sbjct: 602 SSSKTRYLYGKMTPKIKSRFINEMQDTI-EIVEEKNQRLIDVIDYSGKIDERITTYKKVQ 660 >UniRef50_C9LQY6 Putative ATP-dependent nuclease subunit B n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQY6_9FIRM Length = 1028 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 144/1063 (13%), Positives = 292/1063 (27%), Gaps = 173/1063 (16%) Query: 127 LSSKAADLFDQYLVY--RPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRW 184 + +LF Q ++ L LG A + L+K +Y H Sbjct: 9 FAENLMNLFHQLDMFCISETALHDASLAEEGTPLGRKLADLSLLYKNYHDYLHT------ 62 Query: 185 HRANLYQRFIETLESATTCPPGLPS-RVFICGISALPPVYLQALQALGKHIEIHLLFTNP 243 R + + L L R++I G + + P ++ + AL Sbjct: 63 -RFSYEGSLFDLLAGEIPKSEILRRSRIWIDGFNGMTPQKIRIVSALIH----------- 110 Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASW 303 E L D ++ + N + A Sbjct: 111 ----------------------------------TAEEVTFTLPLPDAKEGLSNEIFA-- 134 Query: 304 GKLGRDYIYLLSDLESSQ------ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 + LLS+ E E+ F L + +D + Sbjct: 135 --RPANLYALLSEKEPHFDSVTLPEMKRFRCPR----LRCLAADYFQNVP---------- 178 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 K + I E + + R+L+++ D L RDI+V++ D+ Sbjct: 179 SPCPLPKETSPVPEKGIHIVSAPDSHAEADFISRRILSLV-RDKNLRWRDILVLLRSADT 237 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP-------DSRFVSEDV 470 Y+ ++ F +P +++ +HP++ LL + F E + Sbjct: 238 YTDPLERSFSRY----GIPVFTDEKQPMNNHPLVMLLDGLLHFIKAESRGKNRGFTREHI 293 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 +L + + + L +V + IR+ + + Q Sbjct: 294 FRILKTEIFP---SFPTDMIDKLENYVLKYHIRFSTWQKPWAFRDYRSIDQEPAPLSDKE 350 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 + +A + VL + L W L W Sbjct: 351 ITK---QNTANTWREKVLSLLNPFLAGWKEALSAEDKCAFLYRWLTEQQIPETLSVW--- 404 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 + + + ++ +++ E + D +P L L L Sbjct: 405 ------DELEFEKTKKRPHLQVWKKVLSLLDEIVHVTGKDILPEEELCGILTDGLSALTF 458 Query: 651 SQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 S V + ++ + KVV + G +G +P+++ GF ++K +R Sbjct: 459 SMIPPTLDHVTVTSMDRGYAAEAKVVFIPGALEGSFPKKIDDSGFFTETEKQVLLKSARI 518 Query: 710 ----------DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL-------- 751 ++++ AL A LY+SY + S PS L++ L Sbjct: 519 NLGNNLMELVQEEQFYTYLALTRASDALYLSYPAAAADG-SAAEPSFLLERLKALGYYTE 577 Query: 752 -IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 ++ + S Y + + P + L + Sbjct: 578 NMEILPPSPYHDDPSFFANPNQALSLLPEILRNGRPSPTGNWAALKDWAEGNEYRELMES 637 Query: 811 SQAGKAHSEFVQPLPFTLPETVPL---------ETLQRFWAHPVRAFFQMRLQVNFRTED 861 AG + LP L + + LQ + + P + F + + + R Sbjct: 638 KLAGLRYQNTAARLPKMLARKLFMKGGRFYGSVTKLQNYRSCPYQYFLRYGIGIEERNTG 697 Query: 862 SEI-PDTEPFILEGLSRYQINQQLLNALVEQDDAERL--------------FRRFRAAGD 906 D ++ G+ ++ + N Q E + + + D Sbjct: 698 EADYLDYGNYLHAGIHQFGEILKSQNRQWRQATDEEIEKISEDITEKITPRIKADALSSD 757 Query: 907 LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL-------ACNGVQITGWLPQV 959 + +T + +Q+ ME + + +TG + +V Sbjct: 758 QSAKYTRRVLDQTFRRALQRFRQWSRQSGFDTLDMEKEFYLRISASPTDSFTLTGKIDRV 817 Query: 960 QPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHY 1019 DG E + + L + L A Sbjct: 818 DTDGR-YAAVCDYKTGSPKLSLNE--IMEGLSLQLITYLLALSKTKDTKDLLPAAM---- 870 Query: 1020 LSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNM 1079 + Y G + V P + +N + + + Sbjct: 871 ----MYIYLHGRPKSISVPPNG----IPHPKGKENTNGIFLNDPDVLRTLDSQSGTDDGF 922 Query: 1080 MVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS 1122 + D ++ LT E EA+ +++ L+ L+ +S Sbjct: 923 IGVSYVKDGSVKKTSPVLTAEEFEALKALTEKILIRLYNRLES 965 >UniRef50_B5YHS6 ATP-dependent DNA helicase PcrA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHS6_THEYD Length = 699 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 61/655 (9%), Positives = 182/655 (27%), Gaps = 117/655 (17%) Query: 167 PLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISAL-----PP 221 + +A ++ + + I+ + L V + IS L P Sbjct: 95 RILRAHIDNIGYKRDFIIYDDDDQAGLIKRILKDLNMHEALCKCV-VTKISNLKSNLITP 153 Query: 222 VYL----QALQALGKHIEIHLLFTNPCRYY----WGDIK---------DPAYLAKLLTRQ 264 + + + I++ + N + Y + D+ + L + + Sbjct: 154 EDYISNIEGYEFEERLGRIYMRYQNELKRYNALDFDDLILCVIKLFNENEDLLRRYSEQF 213 Query: 265 RRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQEL 323 + ++ + L VG+ + + G + +L+ Sbjct: 214 KYILVDEFQDTNKSQYMLLQLLCRYHKNICAVGDDDQSIYKFRGANIHNILN-------- 265 Query: 324 DAFVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCH 380 F PD + ++ + ++ + A ++ + I + + Sbjct: 266 --FEKDFPDTKIVKLEQNYRSTKHIILASSAMISRNTMRKPKILWTERDWGEKIFYCQLN 323 Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 + + E + + + + + +D ++ A +PY + Sbjct: 324 NEEEEAKYIAKNIKELYLKGD-YEYKDFAILYR-----LVLQARALEEALRMEGIPYQVI 377 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 + ++ ++ + ++ + ++ +++ P I + + Sbjct: 378 SGVSFYHRKEIKDVLAYMRFILNKEDNVSLMRIINTPP----RGIGASAISKI------- 426 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 A + ++++ + + A L Sbjct: 427 --------------------------------ESEAKKYMISTFEAIKRIIKEDTVSATL 454 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 L S + ++ ++ + +D+LN + E + + + Sbjct: 455 KEKLVSFVTLIDELSEKDYKDA-----ASMIKDILNFTGYLEEIEEDRIQNVLEFL---- 505 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 + +P+ D++A + + V++ TL + + F VV + G Sbjct: 506 ------SSAEKMPVREFLDKVALFSNVDTW--ENKKNYVSLLTLHAAKGLEFPVVFIAGC 557 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 +G+ P D ++R LF + A+ L+I+ + + + Sbjct: 558 EEGILPYF------------KALEDPFELQEERRLFYVGMTRAKNLLFITSVKQRKLYSK 605 Query: 741 --ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 ++ S ++++ + K + P Sbjct: 606 VQKQETSSFIKDIPPEYCICIRKDYSTFAPNKKEPETSKIKPPFVIGCKVKHPTW 660 >UniRef50_C9KJP7 ATP-dependent nuclease subunit B n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJP7_9FIRM Length = 1210 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 132/1078 (12%), Positives = 275/1078 (25%), Gaps = 167/1078 (15%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLS---QKFGIAANIDFPL 64 + A M + + ++L+ + ++ L+ K Sbjct: 15 GKTHACLAAMRQRMAEAPMGPAL---ILLLPEHMTFK-VERELAASIPKGQGFLRSYVFG 70 Query: 65 PASFIWDMFVRVL-PEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRK 123 F + + ++P+ S ++ + K++ L + + Sbjct: 71 FRRFARHVLLETGHMKVPRISEVGRRLLLRKIL----------VHHQKEKDLQVFARAVR 120 Query: 124 LFQLSSKAADLFDQYLVYR--PDWL--AQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 + +D+ ++ YR D L A E E L A L Sbjct: 121 QRGFTESLSDVIQEFKSYRLTTDVLREAADELAKGNERLAGKLQEMALLTDEFAAEMQGK 180 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL-GKHIEIHL 238 N I P + V++ G P + L+AL ++H+ Sbjct: 181 ANDAEDMMNQLAEAI------PEAPLIKGAEVWLDGFIFFNPQEMAVLRALIMTAAKVHV 234 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 D L + + +R + + Sbjct: 235 ALPMTGLAE----GDGRVRLDLPENLQETALFNRPYRTLQAIRRMAREE----------- 279 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 G I+LL++ P ++LH ++ ++ A + Sbjct: 280 ----LAYRGPMPIHLLAEQHRF---------APQSILHGMEQELFRYGGSAQS------- 319 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 + + + + EVE +L ++ D R+I ++V D ++Y Sbjct: 320 -----------EEQGVQLVEAANRRLEVESAAADILRLV-RDEGWHYREIGLLVRDGEAY 367 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 ++ VF +P+ +R HP+ E S + + + E V L Sbjct: 368 GDLVRLVFEDY----GIPFFEDAKRPSIHHPLAELMRSAIEVVARDWRYETVFRCLRTGF 423 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 E + L +V E GIR + + Sbjct: 424 FPPVR----EDIDRLENYVLEFGIRGRKRWQQQEPWDWHRRYSLDDGEQVDEDTASTLAL 479 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 QSV + + L + L L+EW V Sbjct: 480 IDSLRRQSVEALSALED-ALRAADDVRGYTLALYDFLVQLEVPARLQEWAEVAER----- 533 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-G 657 A + A+ + + + + LS L+ LD +IS Sbjct: 534 -EGRLADAAEHRQLWDDSMALFDQLVEVSGTEKMTLSDYEAVLSDGLDALQISLIPPGLD 592 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP---------------- 701 V + + + + +LG + PR++ G + + Sbjct: 593 YVTLASFDQNSLDNMRGLYILGADAATMPRRVREQGIFSDADRLHIAETLAAFQKEGEEE 652 Query: 702 ---KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 RG + +++L A+ L+ISY + + PS LV+++ + ++ Sbjct: 653 HTISRGGHEKSFGEKFLLYRGFTEARDYLWISYALADA-EGNGLQPSPLVKKMRELFPKA 711 Query: 759 HYLPGDEA----------LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP 808 +L + + + L P +EW Sbjct: 712 AFLSIPLETVRRDDDLLLAAPRPALSGLANALRGEREHQAMQPCWRDVYNWAMGQKEWQR 771 Query: 809 AAS-----------QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNF 857 Q + ++F P F L++ Sbjct: 772 PLQLALAGLFARSGAGRIPKELAEQIFAKGTVLRGSVTQFEKFRQCPFAHFAAYGLKLQE 831 Query: 858 RTEDSE-IPDTEPFILEGL-SRYQINQQLLNALVEQDDAER--------------LFRRF 901 R E D + L I ++ + E+ + Sbjct: 832 RREYQFRSMDLGQLLHAVLKEYGSIVKRDYANRWQDVPEEKRAALCEELVNTLAPRLQSE 891 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQLADRVI--ACRQPGQSMEIDLACNGVQI------- 952 Y + +T Q + L+ A + + V + Sbjct: 892 ILLSRDNYRHLKKRIEKTAEQAVGHLSAWAAVSAFQPAFFEEAFGHPDDEVHLKPLPLGD 951 Query: 953 ------TGWLPQVQ-PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKD 1003 G + ++ + + E VY + + ++ Sbjct: 952 GYALSFKGQIDRLDLHECAPYYLILDYKTGHVAINLFE--VYYGLRLQLLVYMMVGRE 1007 >UniRef50_A6GG96 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GG96_9DELT Length = 693 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 66/604 (10%), Positives = 159/604 (26%), Gaps = 76/604 (12%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANL--YQRFIETLESATTCPPGLPSRVFICGISA 218 Q + +AL+ G R ++ + I ++ + +V Sbjct: 111 DQGDVNGIVRALLREYGFHGGSAKKRWDINAIVQRISLWKNDFLSAAEVKRKVSSNDYDE 170 Query: 219 LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFR 278 + +A + + CR +P + R R ++ + Sbjct: 171 IAAELYEAYDDRLRALAAVDFDDLVCRIALMLQDNPLTKKRWRRRFRYLLVDEYQDTNTA 230 Query: 279 DSE-NAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHN 337 + L VG+ A +G G +L F + + Sbjct: 231 QFQMLLELLGEDQNLCVVGDDDQAIYGWRGAKVANIL----------GFDLYFRNAKVIK 280 Query: 338 IQSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 ++++ A A + P + V E + + D++ Sbjct: 281 LEANYRSRPPITTCANAVIAHNTSRHDKELVPQRTGGEKVQLVVTRDGPSEAKWVADKIY 340 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 ++ + P+ V+ + LP+ + + ++ Sbjct: 341 QLIH-ERGARPKHCAVLYRSSRQ-----ARAVEQNLQEHGLPFRMLGGQPFYDKKTVKDA 394 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 + L L V LD P I + + + W R Sbjct: 395 TAYLKLLVMPSDDIAVRRALDTPA----KGIGRKTVERMSHWAEVHQKR----------- 439 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 ++ E G+ + L QL Sbjct: 440 ----------------------------LVDAIYHAKEIEGITGRPLESLERFHNQLRHA 471 Query: 575 RRGLAQERPLEEWLPVCRDM-LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 + ++ + ++ L L + + A + Q ++ + Sbjct: 472 QIAASRGSVKDALRGFLDNVRLRDSVLKETGSGEATKVRWDSVQFLLDSVGRFEERAWNQ 531 Query: 634 L--SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 D L +++ + + + T + + + V ++G+ +G P + Sbjct: 532 KGKPRWSDYLGNLDLKKKDEDEAVPDAITLSTFHSSKGLEWSQVFIIGVEEGTLPHKRTD 591 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQ 749 + +++R LF + A+ +L+++ + E PS + Sbjct: 592 APRLSDAIAG------DLEEERRLFYVGITRARDRLWMTRAATRVDRGRELEIKPSRFLD 645 Query: 750 ELID 753 EL + Sbjct: 646 ELPE 649 >UniRef50_B2S250 Rep helicase, single-stranded DNA-dependent ATPase n=4 Tax=Treponema RepID=B2S250_TREPS Length = 657 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 63/534 (11%), Positives = 149/534 (27%), Gaps = 72/534 (13%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 P LA +R ++ + + L + VG+ + + G + + Sbjct: 191 PDILASYKSRYHYILVDEFQDTSAQQYRLMKMLA-TQNICVVGDDDQSIYSWRGAHHDNI 249 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV---NIEEFSRSDNKRPLDPL 370 LS F P ++ + A + + Sbjct: 250 LS----------FEKDFPYATEITLEQNYRSTGTILAAANGVIAHNTQRKEKALWSGNDS 299 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 I + + E + + +LA + + V++ + Sbjct: 300 GKPIEIFNPETERDEAIFIANTILAEQIR-ASYSFSSFGVLLRTNSF-----MRIIEDVF 353 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 +PY +S + ++ +S L + + ++L +++ P R I ++ L Sbjct: 354 LQENIPYRVSGGMSFFQRKEIKDVLSYLRVISNPDDDVNLLRIINTP----RRGIGKKTL 409 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 + N + + + + R + Q + Sbjct: 410 HLVSDIANTQQCSVFNALNQIINKTHAVDLKESHRTAVE------------NFLQLITQA 457 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 L + + + ++ F + Sbjct: 458 RTHLLSGKNLAYKVRKFVEDI-----------------QYFNYLIQEFQKNEHAARFKFL 500 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 IE ++I Q + L + + Q+ G V++ T+ + + Sbjct: 501 QIEHLVESIEHW---EQSSEHGSLYDYLNRVTLLARDNV--QKETEGAVSLMTIHASKGL 555 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 F VV + G+ G P + + +++R LF A+ A++KLY++ Sbjct: 556 EFPVVFIAGVEAGTIPHERSIEEV------------HSIEEERRLFYVAITRAKEKLYLT 603 Query: 731 YIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 + + ER S + E+ ++ ++H G + L Sbjct: 604 HCRTRKRGGKREERTASPFLDEIPKHLVRAHAPEGKISEEEVTRAFTRIKKLFT 657 >UniRef50_A5CU47 ATP-dependent DNA helicase n=4 Tax=Actinobacteria (class) RepID=A5CU47_CLAM3 Length = 816 Score = 224 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 68/611 (11%), Positives = 148/611 (24%), Gaps = 96/611 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL----------------------FNSDG 291 P A R R ++ + +L + Sbjct: 235 PKVAALYQRRFRHVLVDEYQDTNHAQYSLIRELTRAVAPEDVPVDTRMSTNGMGGIDGAS 294 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 VG+ + + G D + F P + + ++ + +N A Sbjct: 295 LTVVGDSDQSIYAFRGADIRNITE----------FERDFPQSKVVLLEQNYRSTQNILTA 344 Query: 352 GVNIEEF---SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 + + I +S E + + D + + + +I Sbjct: 345 ANAVISNNFDRKDKKLWTSIGDGDKIVGFTGYSGHDEAQFVADEIQKLH--EEGTAYSEI 402 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V +PY I ++ ++ L + Sbjct: 403 AVFYRTNAQ-----TRALEEILIRSAVPYRIMGGTKFYERAEIKDAMAYLVAVANPADVL 457 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 + +L+ P + I L + G+ + EL L L Sbjct: 458 ALRRILNTP----KRGIGPATETALANFAESHGVTFREAMRRASELGL-GPKVTQAILAL 512 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 +RML A+ + + + E Sbjct: 513 SRMLDEVALLLDPDRPEGRTSVGDLVTTLLEK---------------------------- 544 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 ++ A + A ++ A+ E L E++ + Sbjct: 545 ---SGLVQALRASKDAQDEARAENVEELVAVTKEFSRNNPEG--QLVDFLTEVSLVAAAD 599 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 + +G V++ TL + + + V L G+ + + P +++ + G Sbjct: 600 ELDD--SSGTVSLMTLHTAKGLEYDSVFLTGVEEDLLPHRMSAN---------EPGGP-- 646 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEA 766 ++R LF + A+++L+IS Q PS +QE+ + PG Sbjct: 647 -AEERRLFYVGITRARRRLFISLAMTRAQFGEVNVAMPSRYLQEIPAELIDWKQSPGMAT 705 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 + A + + L Sbjct: 706 SRGGTQPRALNARREGGGYGGRSRSSSGFEDPALPPPPRPKTQWANTVTGQVRDNGDLEL 765 Query: 827 TLPETVPLETL 837 + + Sbjct: 766 AFGDRIRHTDF 776 >UniRef50_A1AVZ1 UvrD/REP helicase n=3 Tax=Gammaproteobacteria RepID=A1AVZ1_RUTMC Length = 718 Score = 224 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 63/599 (10%), Positives = 158/599 (26%), Gaps = 89/599 (14%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 Q + K L++ + Q FI ++ + L Sbjct: 116 DAQDQFRIVKRLMKENSIDESKFPIKK--VQWFINNQKNEDIRAQDIDPDYNYFIKKNL- 172 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 + +A + ++ R Y + L R ++ + Sbjct: 173 -EVFELYEAYCQENDLIDFAELLIRSYELLKNNTDLLNHYQARFEHILVDEFQDTNTVQY 231 Query: 281 ENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQ 339 + LFN VG+ + +G G + ++ ++ Sbjct: 232 KWIKLLFNGHNKIFCVGDDDQSIYGWRGAKIENITKLCTDFTPIE----------TIRLK 281 Query: 340 SDILELENRAVAGVN---IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 + N A + I + + E + + + Sbjct: 282 QNYRSTGNILNASNALITHNVNRMGKSLWTDAGNGELIDVYEARTETDEANYVISNIQKL 341 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + +P D ++ +F A +PY I + ++ +S Sbjct: 342 ITN--GASPSDCSILYRFNAQ-----SRIFEEALIKYNIPYIIYGGLKFFEYTEIKDALS 394 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 L L ++ + +++ P I ++ + Sbjct: 395 YLRLIENSADNVAFERVVNFP----TRGIGNVTVKKI----------------------- 427 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 +A ++ +Q+ + A + L + Sbjct: 428 ----------------RTFAQDNHTSLFQAAIQISSILPTRAA------NALSSFINLIK 465 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 + + ++LN L + + ++ + +I + +S Sbjct: 466 QITDDTKHLNLSEKVTNLLNTSGLIMHYSNDKIGSKKENLKKLITITKQYNHEQDNKMSE 525 Query: 637 LRDELAQRLDQERISQRFLAGP-VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 + ++ + V + T+ + + F V L+GM + ++P Sbjct: 526 VMGFISLTSLDSSGNTNASINQNVQLMTIHSAKGLEFPCVFLVGMEEDLFPS-------- 577 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELI 752 + + + D++R L + A +KL +SY + +PS + E+ Sbjct: 578 ----RQSKNEPHLTDEERRLCYVGMTRAMKKLSLSYAIKRFLYGQSLYAYPSRFLNEIP 632 >UniRef50_B9X9R1 UvrD/REP helicase n=1 Tax=bacterium Ellin514 RepID=B9X9R1_9BACT Length = 689 Score = 224 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 67/524 (12%), Positives = 147/524 (28%), Gaps = 59/524 (11%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIY 312 P L R R ++ + L VG+ + +G G + Sbjct: 206 PDALEACRNRFRYIMVDEYQDTNASQFSLVHYLTKEHRNLCVVGDDDQSIYGWRGAEISN 265 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDP 369 LL P+ + ++ + A + + R Sbjct: 266 LLDM----------EKHFPEVKVVKLEQNYRSTNVILTAANAVIKNNLRRRGKQLWSDKG 315 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + IT H S + E + + +++ + ++ +A Sbjct: 316 QGTKITLHTFESDEAEAKAIVEQI-EFKRLASRIPWSQQAILFRTN-----IQSRALETA 369 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + Y + ++ ++ F++ L L + +L + +VP +++ Sbjct: 370 LRQGQVRYHLIGGQSYFDRREIKDFLAYLKLFINPNDDISLLRIANVPA----RGLSDVT 425 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + L +E N T + + + G+ S+ Sbjct: 426 MERLLAASHERKCSVYEAMKNPMVTTSFLTRTRESIEEFVKFVEETRAPLSSGQSMSLKV 485 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + E + L RR + + +D+ + A Sbjct: 486 WAE----------KFLTETGYLEELRRSEKTAEAADNRVRNLKDLTGILDEDNHTIVAGP 535 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 Q A L +EL + + + V + T+ + Sbjct: 536 DGTHQPV---------LTNDPADRLQTFLEEL-TLDSERKEEKEAQGEAVTLITMHSCKG 585 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V ++G+ DG+ P + + D++R LF A+ A Q L I Sbjct: 586 LEFPHVYIVGLEDGLLPHSRSKV-------------EGTLDEERRLFYVAITRAMQTLTI 632 Query: 730 SYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 SY + PS ++EL + + + + + + Sbjct: 633 SYCTGRKKYGQVMPCHPSGFLKELPEELVELGDEKAKQPVTVNT 676 >UniRef50_C9LD15 ATP-dependent DNA helicase PcrA n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LD15_9BACT Length = 794 Score = 224 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 69/601 (11%), Positives = 162/601 (26%), Gaps = 81/601 (13%) Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASW 303 R Y P K + + R ++ + L VG+ + + Sbjct: 198 RTYLLFHDRPDICEKYVRKFRYVLVDEYQDTNAVQYRIIRYLCPGEARLCVVGDDAQSIY 257 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSR 360 G D +L+ F P L ++ + EN A +I + Sbjct: 258 AFRGADIGNILN----------FQTHYPSAKLIKLERNYRSTENIVQAANSIISRNKNRI 307 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + + ++ + E + + + + ++ + ++ Sbjct: 308 PKTIYSENGAGDKVCIISAYTDKDESAKVVKEIFKLRRQHH-ISLDQVAILYRTNAQ--- 363 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 F A + LPY + + ++ I+ + + E +L +++ P Sbjct: 364 --SRAFEDALRNAALPYRVYGGLSFYQRKEIKDIIAYCRVVCNPQDEEALLRIVNYP--- 418 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 I + + L +G Sbjct: 419 -TRGIGQTTMSKLIAAARGNG--------------------------------------- 438 Query: 541 QGEWQSVLPYDESS-GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 + W +L D+ L + L + + ++ + + Sbjct: 439 EPLWSVLLAPDKFGVALNRRTLEKLYAFAELIRSFQARADVMGVYDLVSELLEASGIT-Q 497 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERISQRFLAGP 658 + + Q ++ G + + LL D L Q L ++ Q Sbjct: 498 ELQGDRTPEGLSKWENIQELLNSIKGFESEQETGVVLLADYLPQVVLLTDQDQQDDDEPK 557 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 V + T+ + + F+ V + G+ DG++P A +++R LF Sbjct: 558 VTLMTVHAAKGLEFEAVFVTGLEDGLFPGTAAKYS------------ARELEEERRLFYV 605 Query: 719 ALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 A+ A+ +I+Y PS+ +QE+ ++ + + Sbjct: 606 AVTRAKAHCFITYAKTRYIYGRLEFCEPSLFLQEIDPQYVETDSSSARDFSSFGHLNNGR 665 Query: 777 KAHLTCLHT-RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLE 835 A L P ++ S+ + + + + + Sbjct: 666 MAGLFDAAKVDRKPAPSDFHSPTSSSFVADKAFSHRSSAFEADSSRTTVQQGRLRRLSQA 725 Query: 836 T 836 Sbjct: 726 A 726 >UniRef50_A8U8N1 Exonuclease RexB n=1 Tax=Carnobacterium sp. AT7 RepID=A8U8N1_9LACT Length = 1206 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 110/1121 (9%), Positives = 266/1121 (23%), Gaps = 196/1121 (17%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG----------IA 57 N+ VL + + + F LV Q L Sbjct: 13 NKRSVLLDEIAESLTNHTEESIF----YLVPDHIKFQAEMTVLGSLSQYPYFKNKPMMGM 68 Query: 58 ANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD 117 ++ W + K ++ L+R L + Sbjct: 69 MHLQVFSFTRLAWYWLKDT-------DIYAKTQLT-----------TTGLSMLIRKLLIE 110 Query: 118 DSDKRKLF-------QLSSKAADLFDQYLVYR------PDWLAQWETGHLVEGLGEAQAW 164 +K ++ + DLF + R + Sbjct: 111 HEEKLTIYRGEVRKEGFVQQMTDLFLELRSGRITQIDLDQMILNLGNSPKETDFKLKLQD 170 Query: 165 QAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYL 224 + +++A + + L T + ++I Sbjct: 171 LSLIYQAFDAALLNKYIES-------EDIVSALIQKVTELDLSETTIYIESYYQFTAQEQ 223 Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG 284 + AL K + + + Y + + L + ++ ++ Sbjct: 224 ALILALMKAAKKVTIALTTDKAYAVEKPEMHNLFQTSGTTYYKLYQLARQNNVPVYKDKV 283 Query: 285 QLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE 344 + + L D +++ L Sbjct: 284 IQEKDASYC---------------EELNQLEDF-------------------WVETSQLS 309 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 + + I + Q E+ + + ++ Sbjct: 310 PATTVSLASSDVM-------------GNCIEVWAAENKQAEITHVAKEIRKLVATGH-YR 355 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 +DI+V+ ++D Y I+ +F + I HP++E +L+S+ Sbjct: 356 YKDILVLTRNMDDYLAIIEPLF----TSHAIELFIDSAELMNQHPLIEVIDALVSIYKRN 411 Query: 465 FVSEDVLALLDVPVLAARFDI----TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 + DV+ LL ++ F+ ++E + + Q V + D L Sbjct: 412 WRYADVMRLLRTELVIPAFEEQESLSKERAQRVSQQVERAQKYREKVDITENVLLAYGYE 471 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG-LIAELVGHLASLLMQLNIWRRGLA 579 + W Y E A+ + + ++++ + + G L +L + Sbjct: 472 GYHWTKTEPWHYTRYFYEDAEFQSDNDQRIEQTANSIKTAVSGLLVPFFKRLEKAKTSKD 531 Query: 580 QERPLEEWLPVC-------RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 + L ++ A + E Q + ++ E + + Sbjct: 532 AAKELYLFMETVGVNDQIGFWRDQAIEDNNLEEARKHEQTWQTFLQLLDEYVEVLGDEPF 591 Query: 633 PLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 L L D S + V + R K+ +LG+ D P + Sbjct: 592 DLDSFHAILMTGFDNATYSMVPPSIDQVTFSGIEGTRIGTAKLTFMLGVTDAHLPAKTEN 651 Query: 692 LGFDLMSQK------------PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 + K + + ++ +A + + +KL SY N Sbjct: 652 KSILTEEDRDFFSYFLDETQYLKPTVEAVMASEPFIAYQAFLDSSEKLIFSYPTSDETKN 711 Query: 740 SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK------AHLTCLHTRMPFDPQN 793 + S V + + + ++ T M + Sbjct: 712 GPKL-SPYVDRIAKAFQLPIQAKLMDITSLEDPTGNELLDFVGTKKTTISQLLMVLRKEQ 770 Query: 794 YQPGERQSYAREWLPAASQAGK-------------------AHSEFVQPLPFTLPETVPL 834 Q G+ ++ + + + + + + + Sbjct: 771 DQKGQLNAFWQNLYMFFKRDKQVARDFNHLLVSLVKKNVPMPLRNTIATDLYGKDLYLSV 830 Query: 835 ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD-TEPFILEGLSRYQINQQLLNALVEQDD 893 L+ F+A F L++ R P T F + L + + ++ + + Sbjct: 831 SRLEAFYADHYGHFLTYGLKLKERDVFELSPAGTGEFFHDALDH--LFKTIIQKNLSFNQ 888 Query: 894 AERLF----------------RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP 937 + + +T + + + ++ Sbjct: 889 LNEEMLEELTTEVLTELYGKPKFSILNASNRMKYIRDQLGQTIKKMVWVIGNQSRRTNMK 948 Query: 938 GQSMEIDL-----------------ACNGVQITGWLPQVQPDGLL---RWRPSLLSVAQG 977 E+ + + G + +V + + Sbjct: 949 NIQTEVLFGHVANQTGIEGLSFRLNNGGTLYLRGKIDRVDAMTVGTESYLSVVDYKSSAH 1008 Query: 978 MQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALH 1018 + + Y + L A+ A Sbjct: 1009 KFNYQD--AYYGLAMQMITYLDTALQNAVDLIGHEAKPAGA 1047 >UniRef50_B1XW04 UvrD/REP helicase n=41 Tax=Bacteria RepID=B1XW04_POLNS Length = 788 Score = 223 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 68/639 (10%), Positives = 163/639 (25%), Gaps = 83/639 (12%) Query: 145 WLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCP 204 L + + Q L + A Q FI + Sbjct: 103 LLRAHHKEAGLPSTFQILDTQDQLSAIKRLLKGLKVDDEKYPAKQLQYFIAHAKERGQRA 162 Query: 205 PGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQ 264 L A A + + R Y A R Sbjct: 163 KDLS---VGDDFQAKMAQLYAAYDEQCQREGVVDFAELLLRSYELLKHSEAIRTHYQERF 219 Query: 265 RRHSFEDRELPLFRDSENAGQLFNSD------------GEQDVGNPLLASWGKLGRDYIY 312 R ++ + L D VG+ + + G D Sbjct: 220 RHILIDEFQDTNALQYAWLKLLSGHDASSINVSGMGSSSVFAVGDDDQSIYAFRGADVEN 279 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILE---LENRAVAGVNIEEFSRSDNKRPLDP 369 + + L+ ++ + + + A + N R Sbjct: 280 M----------RLYEKQY-HPLMVKLEQNYRSHGHILDTANHLIANNSERLGKNLRTDAD 328 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + + S E L D + A++ + + ++ ++ + A Sbjct: 329 HGEPVRIYEAPSDHAEAAWLVDEIKALV--NSGIKRTEVALLYRSNAQ-----SRIIEHA 381 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY + ++ ++ L ++ +++ P I Sbjct: 382 LFSAGIPYRVYGGLRFFERAEIKHALAYSRLLENPNDDTSFSRVVNFP----TRGIGARS 437 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + L+ + + + + M + + V+ Sbjct: 438 IEVLQDAARAQQCSLYLAASTLE--GKAGAALGGFVRLVDHMREATRHNTLPETVEFVIQ 495 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + L+ R G + L+E + + Sbjct: 496 HSG--------------LIQHYLSEREGQDRVENLQELINAATAFIAEEGYGQDAAA--- 538 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 A+++ + PL+ L+ + V + T+ + Sbjct: 539 --------AMLSGENAPGVAEVSPLAAFLSH--ASLEAGDNQAQAGQDAVQLMTVHSAKG 588 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V + G+ +G++P + + +++ +++R L A+ A+++LY+ Sbjct: 589 LEFTSVFITGLEEGLFPHENSVN------------EQNGLEEERRLMYVAITRAKERLYL 636 Query: 730 SYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEA 766 S+ + R+ PS ++EL + +A Sbjct: 637 SHTQSRMLHGQVRYNMPSRFLEELPSDSLKWLTPKARDA 675 >UniRef50_Q0SMP9 Rep helicase, single-stranded DNA-dependent ATPase n=19 Tax=Borrelia burgdorferi group RepID=Q0SMP9_BORAP Length = 659 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 78/605 (12%), Positives = 183/605 (30%), Gaps = 79/605 (13%) Query: 169 WKALVEYTHQLGQPRWHRANLYQRFI--ETLESATTCPPGLPSRVFIC--GISALPPVYL 224 +K L + R +L + + E L + L + + + GI L + Sbjct: 101 YKLLGYRKNFSIYDDNDRISLLKEILLDEGLLNKKVSLNSLSNVISLFKNGILTLNDLKE 160 Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLA--------KLLTRQRRHSFEDRELPL 276 + + + + E L N + I P L K R + ++ + Sbjct: 161 EDIN-IFRLYEERLRLYN-SFDFDDLILKPKELLSNNSDIRNKYSKRYKYVLIDEFQDTS 218 Query: 277 FRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 L N VG+ + + G Y +L F + Sbjct: 219 LIQYNFIRLLINHSNLCCVGDDDQSIYSWRGASYNNMLQ----------FEKDY-NAKEI 267 Query: 337 NIQSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL 393 ++ + +N A + + + + I F + +E E + ++ Sbjct: 268 KLEQNYRSAKNILDVANSVILNNKNRKEKTLWSSKMCSKVIDFFIFEDEIQESEFVASQI 327 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 + + + + I V++ + + + Y +S + ++ Sbjct: 328 IEL-SKLEGFQSKKIGVLMRTNALFKNV-----EMIFKRQGIKYKVSGGTSFFQRKEIKD 381 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 IS L++ + D+L ++++P R I +E L+ +R ++ G ++ Sbjct: 382 IISYLNVIINPKSDYDLLRIINIP----RRGIGKEYLKKIRDMADKKGCCIYDALCDIAF 437 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 + ++L +ES + + Y + ++ Sbjct: 438 SFASISSY-------DKVLNKQVIESIEDFVSFIEEYQYKFSIKKNTYSNI--------- 481 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 ++E + + + + Q + ++ + Sbjct: 482 ----------IKEMIESI-EYWGFLVSENPNSIKVAEYKYQNIEGFLSIIKNWESKQLGE 530 Query: 634 LSLLRDELAQ-RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L L L L +S+ +N+ T+ + + F V + + D + P Sbjct: 531 LRDLSSFLNYIVLQSNEVSEESENININLMTVHSAKGLEFDYVFFIAVEDNIIPHHRIIE 590 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQE 750 +L ++ R +F AL A+ L I+ + +D E+ PS + E Sbjct: 591 DSELDLEEE-----------RRVFYVALTRAKDSLVITMANKRKKDRQIFEQLPSRFISE 639 Query: 751 LIDYI 755 + Sbjct: 640 IPKEF 644 >UniRef50_Q98PM4 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma pulmonis RepID=Q98PM4_MYCPU Length = 734 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 61/554 (11%), Positives = 155/554 (27%), Gaps = 78/554 (14%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIY 312 K ++ ++ + F E L ++ VG+P + G D+ Sbjct: 201 SDLTRQKWASKYDYVLVDEFQDTSFIQYEIVKVLASNKNITIVGDPDQNIYSWRGSDFRI 260 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDP 369 +L+ F + N + + N + + N Sbjct: 261 MLN----------FDKDFENTKTINFEQNYRSTPNILEIANKLIKNNKNRMEKNLFSTSA 310 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + F ++ + E + + ++++ + ++ I + Sbjct: 311 RGADPLFLTKYNNKLEAKWIVEKIIELSQQ---TKYSQIAIFTRTAK-----YSRDLEEE 362 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY I +++ ++ L L + + +++ P R I + Sbjct: 363 LFQNSIPYVIYGGTRFFEREIVKDLLAYLRLI-NNSSEVSFIRVINTP----RRSIGPKT 417 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L + +E G + Y ++ Q + Sbjct: 418 LEKIITLASEKGY----------------------EKSFEFLENLYINKNLQSFFSL--- 452 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 L + + R L ++ + L + ++ + Sbjct: 453 ------------KDLEKFIQAILEARESLKNDQKIAYVLEKLVEKIDYKSFCIFDRNKRK 500 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 ++ + + + L D L + Q + V+I T + Sbjct: 501 DQVDFDIDQLYESIAFWEEENPELLLD--DYLNEISLLTSGDQNENSDQVSIMTAHSAKG 558 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V + G+ + +P L+ D + +++R L A+ A+++L++ Sbjct: 559 LEFDYVFITGLAEKHFPHFLSLKSNDYDDE---------IEEERRLCYVAVTRAKKQLFL 609 Query: 730 SYI----GRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 + ++ E S ++E+ Q++ D + Sbjct: 610 TAPLTLYWARDREKEELEISRFIEEMGLASSQNYEKRFSHKSLNDTDSYYQNSDYVSFDW 669 Query: 786 RMPFDPQNYQPGER 799 + F QNY + Sbjct: 670 KEKFVEQNYAKDNQ 683 >UniRef50_C4V2E4 ATP-dependent deoxyribonuclease subunit B n=2 Tax=Selenomonas RepID=C4V2E4_9FIRM Length = 1198 Score = 222 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 145/1071 (13%), Positives = 260/1071 (24%), Gaps = 183/1071 (17%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDF--PLP 65 + M+ ++ E L ++LV + A + Sbjct: 15 GKTYDCLTAMKDVLREEPLG---RQRILLVPEHMTYAAERALAEALTHGAGFLQVYVFGF 71 Query: 66 ASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF 125 + + E LP++ + LL+ L S + +F Sbjct: 72 RRLGRQVLLETGGEH------------------LPRISDIGRRILLKDILLQHSRELSVF 113 Query: 126 Q-----------LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 Q L A+L R + GE A L L Sbjct: 114 QRSVHKRGFTEVLGHTIAEL------KRDRLSSDHLRQAADVSTGEHARLSAKL-TELAT 166 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLP-SRVFICGISALPPVYLQALQALGKH 233 +L R + +E L + P L + +++ G P L +AL Sbjct: 167 IMDELAARMEGRLTDHTDRMERLAAQLIDAPFLRGAELWVDGFDFFNPQELAVFRAL--- 223 Query: 234 IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ 293 +++ D N + G Sbjct: 224 ------------------------FRVVDTVHVSLTMDGRDDGTHVFTNLPENIYDTGLF 259 Query: 294 DVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 ++LL + + ++ A + + + H +++ L L + G Sbjct: 260 A-----------RSYQTMHLLQQIFTEEQPSAEIGIRLMPVQHRARTEGLRLLEAQLFGH 308 Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA 413 D SI +P+ EVE +L + D R+I V+V Sbjct: 309 GHI----------TPAKDDSIRIVEAANPRLEVETAAADILRL-ARDNGYRYREIAVLVR 357 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 D+D Y + F +P+ + +R HP+ E ++ + + E V Sbjct: 358 DVDLYGDLLSLAFADC----GIPFYLDVKRPSAHHPLAELLRAVAQMTWRGWAYETVFRA 413 Query: 474 LDVPVL-----------AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 L +E + L + GIR + Sbjct: 414 LRTGFFPLLGTEEDEDAPPLCADWQEAVDRLENYCLAYGIRSESQWTATEPWDFVQRRVT 473 Query: 523 TWRFGLTRMLLGYAMESAQGEWQS--VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 L E + P +G + L + L Sbjct: 474 EHELHLDEEEERLREEQWLDHLRRRIAEPLSLLTGHLRRHESTARVRTKALYDFLDELCV 533 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 + L W AA I A+ + + + D + + Sbjct: 534 PQTLRLWSETADR------EGRLADAAAHRQIWSSCMALFDQLVEVRGDDPLSSRDYEEL 587 Query: 641 LAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 L+ LD I+ V + + + V ++G N G+ PR G ++ Sbjct: 588 LSDGLDAMSIALIPPGLDHVTVASFDQNSIAGARAVFVIGANAGIMPRAGTTSGVFSDTE 647 Query: 700 KPKRGDRSRRD-----------------DDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 G+ + +RY A+ L++SY S D S Sbjct: 648 LLFIGESLQTAGADSGHTVFGGRTQQSFLERYQLYRGFTEARDYLWVSYALSS-VDGSTL 706 Query: 743 FPSVLVQELIDY--------IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 PS L+ L + + + + + A L R Sbjct: 707 APSPLIARLRRISSSFFSIPLALAGRDDPLLLSAPYPAFSHLTAALREKKERGEMPAMWG 766 Query: 795 QPGERQSYAREWLPAASQA-----------GKAHSEFVQPLPFTLPETVPLETLQRFWAH 843 P + + + L+ F Sbjct: 767 DVYNWMLQDAVMQPLLRRMLHGLFLPPREVSIPAPVAARLFTRDRRLSGSTTRLETFRQC 826 Query: 844 PVRAFFQMRLQVNFRTEDSEIP-DTEPFILEGLSRYQIN-------QQLLNALVEQDDAE 895 P R F L++ R D + L Y + E Sbjct: 827 PFRHFAMYGLRLQQRDRYEFQSNDFGTLLHGILRGYGEWVRSAYGNDWCAALAEAPEKIE 886 Query: 896 RLFRRFR-------AAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL--A 946 L + Y E T Q +Q L A EI Sbjct: 887 ELLQELIPQVHSTVLMSRASYRHRIERIRCTAQQTIQHLTSWAAASSFHPYGFEISFGRR 946 Query: 947 CNGVQ-------------ITGWLPQVQP-DGLLRWRPSLLSVAQGMQLWLE 983 +GV+ + G + ++ D + L E Sbjct: 947 NDGVRLADFPLADGMTLSLRGQIDRLDVMDHHAYYLVLDYKTGATSLLLPE 997 >UniRef50_C5BBB0 ATP-dependent DNA helicase Rep, putative n=2 Tax=Edwardsiella RepID=C5BBB0_EDWI9 Length = 726 Score = 222 bits (564), Expect = 7e-56, Method: Composition-based stats. Identities = 88/616 (14%), Positives = 161/616 (26%), Gaps = 91/616 (14%) Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 + L + QL Q +N I+ A R+F Sbjct: 174 RWLEKDKTQLQQLIATISNWKNDLID-PAQAAAQARSARERLFADC--------YGLYDT 224 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 K + +DP + R R ++ + E L S Sbjct: 225 QLKSCNVLDFDDLILLPTLLLRRDPEVRERWQQRIRYLLVDEYQDTNTSQYELVKLLVGS 284 Query: 290 -DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR 348 VG+ + + G Q L + P + ++ + + Sbjct: 285 RARFTVVGDDDQSIYSWRGA----------RPQNLVLLKEDFPALQVVKLEQNYRSSQRI 334 Query: 349 A-VAGVNIEEFSRSDNKRPLDP--LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 A + I KR + ++ E E + L+A T Sbjct: 335 LKAANILIANNPHVFEKRLFSELGYGEPLKVITANNEDHEAERVVGELIAHHFIHKTA-Y 393 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 D ++ VF +PY IS + S ++ +S L + + Sbjct: 394 SDYAILYR-----GNHQSRVFEKMLMQNRIPYKISGGTSFFSRAEIKDLLSYLRVLTNPD 448 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 L +++ P R +I L+ L W N+ GI Sbjct: 449 DDSAFLRIVNTP----RREIGPSTLQKLGAWANQRGI----------------------- 481 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 +++ L + L ++ R ++ Sbjct: 482 ----------------SLFRASFDVGLEQTLSGRGLASLQHFTRWMDELSRLCERDATAA 525 Query: 586 E----WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 L E M + Q + + G+ + + L+ + + Sbjct: 526 VRDLIHGIDYESWLCETSASPRAAEMRMKNVNQLFGWMTDMLQGSDLDEPMTLTQVVNRF 585 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 R ER A V + TL + + F V L+GM +G+ P Q + Sbjct: 586 TLRDMMERGESEEEADQVQLMTLHASKGLEFPYVYLVGMEEGLLPHQSSI---------- 635 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSH 759 D D++R L + AQ+ L + Q PS + EL Sbjct: 636 ---DEDNVDEERRLAYVGITRAQKALVFTLCRERRQYGELMRPEPSRFLLELPQDDLSWE 692 Query: 760 YLPGDEALNCDESEAR 775 + + Sbjct: 693 SARKVVSPQERMQRGQ 708 >UniRef50_C1TPS7 DNA/RNA helicase, superfamily I n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TPS7_9BACT Length = 656 Score = 222 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 71/524 (13%), Positives = 140/524 (26%), Gaps = 87/524 (16%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYI 311 D L K R ++ + L VG+P + +G G D Sbjct: 204 DRDILKKERDRLDWILVDEYQDVNRPQFALLRLLAGDSPNVMAVGDPDQSIYGWRGADMS 263 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLD 368 +L F P + + ++ + E A ++ Sbjct: 264 VIL----------GFERHFPGSKVILLEQNYRSTETILDAANSVIGNNVNRPEKRLWTAR 313 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 I + E + D + +L D+ V+ + F Sbjct: 314 SGGEPINVVTLGDERAEARYVSDVVEELLSL--GYRYTDMAVLYRMNA-----LSRNFEQ 366 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 R LPY + A ++ IS L L + + + + +VP E Sbjct: 367 EFVKRGLPYRVVKGTAFYDRKEIKDAISYLRLAVNPRDASALARVANVPPRGLGAKGLES 426 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 YL +E+ W Sbjct: 427 VESYLSTHASEARTTW------------------------------------------CR 444 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 D GL + + L + + E++ + + Sbjct: 445 IADGGCGLRGKGDKGIRDLARHMISLIDIGSDLNRAVEYIMDVIGYGSYLEKGYPDQFEE 504 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + +I + L + E+A DQE +++ +L + Sbjct: 505 RRENVMELTSI--------SPGSESLEDVLAEIALYTDQEVDDI---PDGISLSSLHAAK 553 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F VV ++GM DG++P + G R +++R L + A+++LY Sbjct: 554 GLEFPVVFIVGMEDGIFPHGRSLD-----------GGRDELEEERRLCYVGMTRAEERLY 602 Query: 729 ISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCD 770 ++ S S + E+ + G+ + Sbjct: 603 LTSSRFRRLFGSVMNNDVSRFIWEIPENYRVVESRAGEGPNHVR 646 >UniRef50_B3QYS3 UvrD/REP helicase n=9 Tax=Chlorobiaceae RepID=B3QYS3_CHLT3 Length = 765 Score = 222 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 57/504 (11%), Positives = 134/504 (26%), Gaps = 81/504 (16%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIY 312 P LA R + ++ + A L VG+ + + G D Sbjct: 218 PEILAHYQERFQYIMIDEYQDTNRAQYIVAKMLAGQHRNICVVGDDAQSIYSWRGADIAN 277 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR---SDNKRPLDP 369 +L F + + + ++ + + + ++ + Sbjct: 278 IL----------GFQNDYKEATICRLEENYRCTKTILKVANTVISNNKEQLEKTLYTSNE 327 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 +T +RE E + + + D + A Sbjct: 328 TGEPVTLFEATDERREAEKVAMAIRER-KLSSGNQNSDFAIFYRTNAQ-----SRALEDA 381 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + Y + + ++ ++ L + E +L +++ P + E Sbjct: 382 LRFNGIAYRVFGGVSFYKRKEIKDIVAYLRFILNSRDEESLLRIINFPA----RGVGETS 437 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L+ L+ E G + + R Sbjct: 438 LKRLKDIAIEEGF--------------------SLYEAICR-----------------AT 460 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + + + + L+ L + + E L +L + A Sbjct: 461 HYDLQNRLISALNDFRMLIEDLREIAQQHTAYEVVAELLRK-TRLLEILKNENTAEANAR 519 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 Q++ + D L+ + L ++ + V + T+ + Sbjct: 520 YDNLQEFLNFARQFCDKSAEDP-SLNAFLQ--SASLATDQDNADANGNQVTLMTIHAAKG 576 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F VV + G+ + ++P ++ F AL A++KLY+ Sbjct: 577 LEFPVVFVTGLEERLFPLNPDEPRELEEERRL--------------FYVALTRAEKKLYV 622 Query: 730 SYIGRSIQDNS--ERFPSVLVQEL 751 S+ + S ++EL Sbjct: 623 SFAKSRYKFGQSFPAKRSRFIEEL 646 >UniRef50_A9BDV1 UvrD/REP helicase n=44 Tax=Cyanobacteria RepID=A9BDV1_PROM4 Length = 809 Score = 222 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 62/551 (11%), Positives = 152/551 (27%), Gaps = 83/551 (15%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS------------DGEQDVGNPL 299 ++ + R + ++ + + E L + VG+ Sbjct: 241 QNEQVRSYWHNRFKHLLVDEYQDTNWTQYELIKLLVTNGINPSFFSSWSKRSVFVVGDAD 300 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 + + D+ L+ E + ++ + + ++ + A ++ + Sbjct: 301 QSIYSFRAADFRILMGFQEDFKNKNSLQG---LSNVVKLEENYRSTSTILDAANSLISNN 357 Query: 360 RS---DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + + I C E E + RL + + L DI ++ Sbjct: 358 KERLDKVLKATRGEGELIKLTRCDDEISEAEAVVHRLRLLEAHNKDLKWGDIAILYRTNA 417 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 V + +PY + ++ ++ L L + S +L +L+V Sbjct: 418 Q-----SRVIEESLVRWNIPYIVVGGLRFYDRREVKDILAYLRLLINPSDSVSLLRILNV 472 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + I + ++ ++ GI Sbjct: 473 P----KRGIGKTTVQRFSDASSQLGIPLW------------------------------- 497 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 G A+ + L+ L + + ++ + + Sbjct: 498 -----EVVSDPEAIRSLGGRSAKGLLKFKELIDDLRLSLNNTEPSQLIQLVMEKSGYISE 552 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 E E +++ A + +A L L + + Sbjct: 553 LIATATDEAEERRRNLQELVNASLQYQEE---NEAADLEGFLA--TAALASDADKKDTAH 607 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 + + TL + + F +VCL+G+ G++P D + +++R L Sbjct: 608 DRITLMTLHSSKGLEFPIVCLVGLEQGLFPS------------YRSLDDPASLEEERRLC 655 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFP---SVLVQELIDYIGQSHYLPGDEALNCDESE 773 L A+++L++ + R P S+ + E+ + + A E Sbjct: 656 YVGLTRAKERLFLFHATERRIWGGMREPAVSSIFLSEIPSELIEGDIQLAGGAALRRERR 715 Query: 774 ARVKAHLTCLH 784 + Sbjct: 716 MDRLTRVDRRE 726 >UniRef50_A0QK57 Superfamily protein I DNA and RNA helicases n=3 Tax=Mycobacterium avium RepID=A0QK57_MYCA1 Length = 1096 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 124/966 (12%), Positives = 239/966 (24%), Gaps = 148/966 (15%) Query: 156 EGLGEAQAWQAPLWK---ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVF 212 L E + L + L H L + R +++ L + L Sbjct: 178 GQLAEHLVDTSQLRETHLELERLVHALPAGPYQRDRGPSQWLRRLSGTQSERAELVP--- 234 Query: 213 ICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDR 272 L+AL + +++ P A L R R ++ Sbjct: 235 ----------LLEALDERMRAVKVMDFGMQMASAARLAAAFPQVGADLRGRYRVVLLDEY 284 Query: 273 ELPLFRDSENAGQL-----FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFV 327 + L + VG+P+ + +G G L D Sbjct: 285 QDTGHAQRIALSALFGGGVDDGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPRSDGTP 344 Query: 328 DVTPDNLLHNIQS-DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREV 386 + L + N A + D ++ + E Sbjct: 345 APVLELRTSWRNPPRTLRVANAISAEARRRSVAVHALCPRPDAPPGTVRCALLPDMVAER 404 Query: 387 EVLHDRLLA--MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E + D + A ++P V+V +P A R +P + Sbjct: 405 EWIADHIDAHYRRARADGVSPPTAAVLVRRNADAAPI-----ADALRARGIPVEVVGLAG 459 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 S P + +++L L + + + R+ + L L Q G Sbjct: 460 LLSVPEVAELVAMLRLVADPTAGAAAMRV----LTGPRWRLGARDLAALWQRARALGGAG 515 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV------LPYDESSGLIA 558 E A + A + + E S L A Sbjct: 516 TAGGPATAEAIASAADPRNVEADAVCLADAIADPGPAEGYSAAGYARIAALAAELSALRA 575 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 L L L+ ++ + R + L+AF A Sbjct: 576 HLDHPLGDLVAEVRRVMDLDCEVRAAAAAGWAGTEHLDAFADVVAGYAERADTGGT---- 631 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 A + + + + L ++ V + T+ + + +++V + Sbjct: 632 --DASASASVAGLLAFLDVAESVENGLPAAPLAV--ARDRVQVLTVHSAKGLEWQLVAVA 687 Query: 679 GMNDGVYPRQLAPLGFDLMS--------------------------------------QK 700 ++ GV+P A + + + Sbjct: 688 HLSGGVFPSTTAKTTWLTDAAELPPLLRGDRARPGALGIPVLDTSDVTNRKQLSDKISEH 747 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 ++ ++ R D++R L A+ A+ L +S + R PS + E+ D I S Sbjct: 748 RRQLEQRRVDEERRLLYVAVTRAEDTLLVSGHHWAATGIKPRGPSDFLCEIKDVIDASAA 807 Query: 761 LPGD--------EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 A E + + P + + + R+ + A Sbjct: 808 AGDPCGTVEQWAPAPADGERNPLRDNAVEAVWPADPLASRRGEVERGAALVRQAMAAEPG 867 Query: 813 AGKA---------------HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNF 857 A + P P LP + + +L P R RL+ Sbjct: 868 DPGADVEGWAADVDALLVERARVTGPPPQVLPGQLSVSSLVGLARDPAR--AAQRLRHRL 925 Query: 858 RTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFW 917 + + GDLP A ++ Sbjct: 926 PSRPEP----------HALLGNAFHAWVQKFYGA-------ECLFELGDLPGAADSDVGD 968 Query: 918 ETQCQEMQQ--LADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVA 975 + E+Q L A + ++ + G + V + Sbjct: 969 TAELAELQAAFLESPWAARTPVAVEVPFEMPIGDTLVRGRIDAVFAESDGGATVVDWKTG 1028 Query: 976 QGM-----------QLWLEHLVYCASGGNGESRL-----FLRKDGEWRFPPLAAEQALHY 1019 QL + L + A ES + ++R L Sbjct: 1029 APPDSPEAMRQAAVQLAVYRLAWAALAKVPESSVRTAFHYVRARTTVVPEALPTSD---Q 1085 Query: 1020 LSQLIE 1025 L+ L+ Sbjct: 1086 LAGLLA 1091 >UniRef50_C0WLM6 ATP-dependent deoxyribonuclease, subunit B n=3 Tax=Lactobacillus RepID=C0WLM6_LACBU Length = 1181 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 129/1112 (11%), Positives = 274/1112 (24%), Gaps = 207/1112 (18%) Query: 15 ALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN--------IDFPLPA 66 M I+++++ P + LV + + L + G AN + Sbjct: 16 EKMIDILKKQKSAHPDDQFFYLVPNHIKFESEVGILKRLAG--ANDDVTAQSSVQVLSFT 73 Query: 67 SFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF- 125 W ++ LL +T+ D LF Sbjct: 74 RLAWYFLRTTSQYQK------------------QRISPAGINMLLYQIMTEHQDDLILFS 115 Query: 126 ------QLSSKAADLFD--QYLVYRPDWLAQW---ETGHLVEGLGEAQAWQAPLWKALVE 174 + A Q P+ L + + L L + + ++ + Sbjct: 116 QEAGLPGFIDQIAHQISVMQAGNVLPEDLMKMNENQESRLSNDLRDKLHDFSIIYAEYEK 175 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 + NL +++ + + +I S + ++ L + Sbjct: 176 RIDDQYFDNHNVLNLLSDYLQRQDLSHYH-------FYISDFSKFTAQECRLVETLTQGG 228 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 + I D Y L Sbjct: 229 ASMTMSL---------ILDKPYRTAL---------------------------------- 245 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 P + + ++ +T D I +D+L+LE + Sbjct: 246 ---PDQPNLFYQSAKLFLRFYKFAADNQIPYLPIITADQP--RISADLLKLEKFWIQSSG 300 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 + + SI + + E++ + R+ M+ D +++ Sbjct: 301 LGAIDDNPITVS-----KSIQVYQADNQYSELDQMATRIRQMVSTGK-YRYSDFLILTRH 354 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD----SRFVSEDV 470 +DSY + +F + +PY +++ HP++E +L + D + +DV Sbjct: 355 LDSYETILDPIF----TMQQIPYFRDIQKSMVDHPLVELLEALFDMYDPDRPRNYRYDDV 410 Query: 471 LALLDVPVLAARFDITEEG-----------LRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + L ++ + L G +W DDD Sbjct: 411 MRFLKSELVLPQATDGTAMKIDDYRQAVSLTENLVLKNGFEGKKWTQDDDWQYVWVADDD 470 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 R+ + + A L + Sbjct: 471 DGTVLTEKDKRITQ-----QINVIRHLIKNALPNFYNRFYKAKTNADAAGILYRFLVENG 525 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 L++W D D + + + + +++ E + Sbjct: 526 VVNRLQDWRNAAVD------RQDINRSDEIEQVWRTFCSLLDENVRILGDKPFVAQDFWA 579 Query: 640 ELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 + + SQ V I ++ KV ++G ND P ++ Sbjct: 580 LIYAGFEGATYSQIPSTLDQVQISESGMVQMNNRKVTMMIGSNDETMPERIVNKSLFGDD 639 Query: 699 QKPKRGDR------------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 + D + + YL A S +L SY + D S S Sbjct: 640 DVLQIQDNLSDSQYLNDPADEQMAAEPYLNYLAFTSPSSRLIFSYTNH-VNDESGINLSP 698 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESEARV-KAHLTCLHTRMPFDPQNYQPGERQSYARE 805 V + + N + T H G+ Sbjct: 699 YVSRIAAHFNLKVVNYAAVPDNQRAVNVYIGSKRATLHHLIQVIQDTYKNKGQLNDTWAF 758 Query: 806 WLPAASQAGKAHS------------EFVQPLPFTLPETVP-------LETLQRFWAHPVR 846 Q A PL + E + + L+ F+ +P Sbjct: 759 IFNQLKQDPDAAPLTNQLLGSIDYKNVPVPLSREIAEKLYGSALNISISQLESFYENPYE 818 Query: 847 AFFQMRLQVNFRTEDSEIPD-TEPFILEGLSR-YQINQQ----------------LLNAL 888 F + L++ R + P T F E L R + + + + Sbjct: 819 YFLKYGLRLQEREQFELSPASTGQFFHEALDRIISMVHEQKIDLAGLSDRDVDDLVAENV 878 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI---------------A 933 + F+ T Q ++ + D+ Sbjct: 879 EAMVNDPDNFQYIILNSSNRMHYITLQLQATIQQMIRTMRDQQRITPMRPQNTELIFGQP 938 Query: 934 CRQPGQSMEIDLAC-NGVQITGWLPQVQPDGLLRWR---PSLLSVAQGMQLWLEHLVYCA 989 + + + +L V + G + ++ + R A + + Y Sbjct: 939 SSKGLKGLSFELPNQKKVNVRGRIDRIDSMKVNDKRYFGIVDYKSADKKFDFNQ--AYIG 996 Query: 990 SGGNGESRLFLRKDGEWRFPPLAAEQALHYLS 1021 + + L + + + L + + L+ Sbjct: 997 TSMQLLTYLDVLR---YNLSTLNPDSSDALLA 1025 >UniRef50_D1ACX8 UvrD/REP helicase n=2 Tax=Streptosporangineae RepID=D1ACX8_THECD Length = 1059 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 113/900 (12%), Positives = 230/900 (25%), Gaps = 104/900 (11%) Query: 139 LVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLE 198 L+ P+ L + E A W L +AL A + F+ Sbjct: 124 LLSAPEQLLEVRRLLEGEAADGAVHWPRRLHEALTT---------RGFAEELRDFMLRAA 174 Query: 199 SATTCPPGLPSRVFICG---ISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPA 255 P L ++ G A+ + Q + +T+ + + Sbjct: 175 ERGYGPQELEELGYLKGRDDWVAIGRFMNRYEQRFAVDPVLTYDYTDLIEAAAALLAEEE 234 Query: 256 YLAKLLTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIYLL 314 + ++ + L + VG+P + +G G D + Sbjct: 235 VRFQERAAYDAVFVDEYQDTDPAQEHLLKHLAGDGRDLVVVGDPDQSIYGFRGADVRGI- 293 Query: 315 SDLESSQELDAFVDVTPDNLLH--NIQSDILELENR--AVAGVNIEEFSRSDNKRPLDPL 370 D L + ILE R + Sbjct: 294 MDFPHRFPTADGRPAPVVALRECRRMSPAILEASRRIARRLPAGPSAAEHRALRPRQGAE 353 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 D + + SP +E ++ D L + + V+V P ++ A Sbjct: 354 DGEVHVVIADSPGQEAALVADELRRAHLL-EGVPWSRMAVLVRSAVRQVPPLRRALAQAG 412 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 D P + F+ LL + + + + L Sbjct: 413 VP---VVVAGDELPLMGEPAVRPFLMLLRAALEKGYLTGE--VAEELLTGPLGGADALTL 467 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 R L++ + E G D L +L+ + + +L Sbjct: 468 RRLKRALREVETLSGGDRPVGELLVAA------LEDPRELLLVHPKVRAPAERVAHLLQV 521 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 G E+ + WL A AA Sbjct: 522 ARQGGTAEEV-------------LWNVWQASGLADAWLEQ-------SAKGGARGAAADR 561 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL--AQRLDQERISQRFLAGPVNICTLMPMR 668 ++ L E+ + Q V I T + Sbjct: 562 DLDAVVVLFERAARFTDRMPQAGPELFVAEISGEEIAGDTIADQAPEGEAVRILTAHRAK 621 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD------------------ 710 + ++VV + G+ +GV+P + + + S Sbjct: 622 GLEWEVVIVAGVQEGVWPDLRLRGSLLGVEELIEHHAGSDLADLLAEGGRGTAAGASMAA 681 Query: 711 ----DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL-IDYIGQSHYLPGDE 765 ++R LF A+ A+++L ++ +G + PS + EL + +S Sbjct: 682 KLLDEERRLFYVAVTRARRRLVVTAVGGDDTEER---PSRFLNELAPGALERSELDEKTR 738 Query: 766 ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA--REWLPAASQAGKAHSEFVQP 823 L+ A ++A +T P R + A R P + A A S+ Sbjct: 739 WLSLPALVADLRAVVTDPSRPQPLRRAAAAHLARLARAGVRGAHPDSWYAITALSDPRPA 798 Query: 824 LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 T+ ++ F +R + D + ++ Sbjct: 799 FTADEQITISPSQVETFTTCGLRWLLASAVGARDGGPDEL-----------ATMGKVVHA 847 Query: 884 LLNAL-----VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG 938 + + ++D + + + E + + + A Sbjct: 848 VAELAGSHGDLAEEDVAQRLDEIWKELNFGSSWYSGKQREQAAKMVDKFLAWHRANPNEL 907 Query: 939 QSME--IDLACNGVQITGWLPQVQPDGLLRWRPSLLSVA------QGMQLWLEHLVYCAS 990 ++E + V I G + + + D R + + + + + VY + Sbjct: 908 VALEEDFQVELGRVVIRGRIDRAERDEHGRAVVVDIKTSAQKVPDKELARHPQLGVYQYA 967 >UniRef50_D1BXF2 ATP-dependent DNA helicase PcrA n=5 Tax=Actinomycetales RepID=D1BXF2_XYLCX Length = 896 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 70/644 (10%), Positives = 151/644 (23%), Gaps = 134/644 (20%) Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 P +N L + + + LQ AL Sbjct: 201 NLDPKKYPARGLSNRISDLKNELVTPEDYAEQGEKDPVLADVYTRYQARLQQASAL-DFD 259 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF------- 287 +I + + + + P R R ++ + +L Sbjct: 260 DIIMTTVHLLQAF------PNVAEHYRRRFRHVLVDEYQDTNHAQYVLVKELVGGVVSTG 313 Query: 288 -------------------------------NSDGEQDVGNPLLASWGKLGRDYIYLLSD 316 VG+ + + G Sbjct: 314 STTGGGSTTGGGSTTGGGSTAGGGSTAGGDLEPGELTVVGDADQSIYAFRGATIRN---- 369 Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN-IEEFSRSDNKRPLDPLDSSIT 375 + F D ++ + + A I + KR + Sbjct: 370 ------IQEFEQDYRDATTILLEQNYRSTQTILSAANAVISRNADRKPKRLWTAAGAGAR 423 Query: 376 F--HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 +V +E + + + + + + P D+ + Sbjct: 424 IVGYVADDEHQEARFVAEEIDRL-GDSDGVRPGDVAIFYRTNAQ-----SRSLEEVLVRV 477 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 LPY + ++ I+ L + ++ +L+VP Sbjct: 478 GLPYKVVGGTRFYERREIKDAIAYLRALANPDDDVNLRRVLNVP---------------- 521 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + ++ G A ++ ++ Sbjct: 522 ---------------------------KRGLGERAEALVAGLAERERISFGAALDRAEDV 554 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 G+ + L + R + P L D A + Sbjct: 555 PGMSTRTLNPLRGFRDLMRGLRALVEAGEPPAAILGAVLDRTGYLAELRASDDPQDASRV 614 Query: 614 QQWQAIIAEGLGAQY-GDAVPLSLLRDELAQRLDQERISQRFLAGP------------VN 660 + + A L + ++ D ++I +A V Sbjct: 615 ENLAELHAVATEFSQTDPEGSLVDFLERVSLVADSDQIPDEDVADGEAEQEPKVDQGVVT 674 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + TL + + F VV L GM DG +P + D + ++R L + Sbjct: 675 LMTLHTAKGLEFPVVFLTGMEDGTFPHMRS------------LHDDAELAEERRLAYVGI 722 Query: 721 ISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLP 762 A+++LY+S G +E PS + ++ + + Sbjct: 723 TRARERLYLSRAGMRSAWGMSNEMPPSRFLTDVPEDLWDWRRKE 766 >UniRef50_C6NTI8 ATP-dependent DNA helicase UvrD/PcrA n=2 Tax=Gammaproteobacteria RepID=C6NTI8_9GAMM Length = 729 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 75/633 (11%), Positives = 160/633 (25%), Gaps = 83/633 (13%) Query: 152 GHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRV 211 G + L + + + RA Q I + P +P+R Sbjct: 116 GLPADFQVLDSDDSQRLVRRALRELGLDEKQWTPRALAAQ--IGRWKDEGWTPAQVPARE 173 Query: 212 FICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFED 271 G +P + + + + + F + Y L R + ++ Sbjct: 174 V--GRWTIPVQVYERYERIKERGG-LVDFADLLLYALRLWDQDGILEHYRERFQHVLVDE 230 Query: 272 RELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTP 331 + +L VG+ + + G LL F + P Sbjct: 231 FQDTNAVQYTWLRRLAAHGRLFVVGDDDQSIYAWRGARVENLLR----------FAEDFP 280 Query: 332 DNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEV 388 L ++ + A A + + + ++ + E Sbjct: 281 GAALVRLEQNYRSSAPILAAANAVIAHNAERLGKTLWTAQDGGEPLELYAAYNEEDEARF 340 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 + ++ + + D ++ VF +PY + Sbjct: 341 VVAQIQQWVAQ--GGRREDCAILYRSNAQ-----SRVFEEILVREGVPYRVYGGLRFFER 393 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 ++ ++ L L +R ++++P I L LR E G+ Sbjct: 394 AEIKDVLAYLRLCRNRHDDASFERVVNLP----TRGIGNVTLERLRLQAREQGLS----- 444 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 + + + + + + A + Q V+ A L Sbjct: 445 LWQAAGQAASPKLNAFLTLVDGLAAEIAGDELDAAVQRVIEVTGLRDWYARDGDRNEGRL 504 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 L+ +EE Sbjct: 505 ENLDELINAARAYAFVEE---------------------------------REALRELNP 531 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 LS L+ + V + +L + + F VV L+G+ +G++P Q Sbjct: 532 DPGNRLSEFLTH--AALEAGEGASDAWEDAVQLMSLHSAKGLEFPVVFLVGLEEGLFPHQ 589 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSV 746 + D ++R L + A ++L + Y SER PS Sbjct: 590 RS------------LEDADGLAEERRLCYVGMTRAMRRLVLCYAESRRLHGSERASLPSR 637 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 +++L + + + Sbjct: 638 FLRDLPSDLVRELRPRARIRRPVVPTATLSPRQ 670 >UniRef50_C8WV10 UvrD/REP helicase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WV10_ALIAD Length = 705 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 62/534 (11%), Positives = 140/534 (26%), Gaps = 81/534 (15%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASWGKLGRDY 310 ++ K + R ++ + L VG+ A + G D Sbjct: 201 QNDDLRDKYQEKFRHVLVDEYQDTNGIQFRLLRLLCAKHRNLCAVGDADQAIYAWRGADS 260 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPL 367 ++L F PD + + + + A + + R R Sbjct: 261 EHMLR----------FERDFPDAKIVVLTRNYRSTQEILDAANSVIAHNPRRRPKELRST 310 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 E + + + + D V+ Sbjct: 311 RGHGDKPLVVRLPDGAAEAHYVAEAIEEHVRN--GGRYEDCAVLYRANAQ-----SRAIE 363 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 +R +PY + ++ ++ L + + +L +++ P + + + Sbjct: 364 EKLLERAIPYTVVGGMTFYDRREVKDVLAYLRVLVNPQDEISLLRIINRP----KRGLGD 419 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + L ++ + G+ Sbjct: 420 TAVDRLLEFAHAEGMS----------------------------------------LYEA 439 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 L + E +GL L + E V ++ + Sbjct: 440 LAHGEEAGLSERTAEAARQFHASLQELALWMEGMAVSEFLAEVLHATRYREMYLESGKKE 499 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + + + + + ++ E++ D ++ R G V + TL Sbjct: 500 DLARV-ENIDELFSVTRSFDERRGGTVAEFLAEVSLLSDIDKERDR-GKGSVRLMTLHAS 557 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F VV L+GM +G++P + D R +++R L L A +L Sbjct: 558 KGLEFPVVFLVGMEEGLFPHARSMD------------DPLRIEEERNLCYVGLTRAMDRL 605 Query: 728 YISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 +++ R PS + E+ + + L RV Sbjct: 606 VLTHAAWRTLYGQTVAREPSRFLAEIREDLVVRVDLAEALEPEVLRPGDRVVHP 659 >UniRef50_B0MU18 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B0MU18_9BACT Length = 813 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 64/527 (12%), Positives = 160/527 (30%), Gaps = 63/527 (11%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIY 312 P A+ + + ++ + + +L VG+ + + G Sbjct: 210 PDVTARYQEQFKYILVDEYQDTNYAQYVIIRRLSQLHSKVCVVGDDAQSIYSFRGAKIEN 269 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN-IEEFSRSDNKRPLDPLD 371 +LS F P+ ++ ++ + A + IE S+ K+ D Sbjct: 270 ILS----------FKKDFPNAMIFKLEQNYRSTRTIVEAANSVIERNSKRMEKKCFSEGD 319 Query: 372 --SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 I ++ + E E++ L + + ++ + A Sbjct: 320 MGEKIRVLRAYTDREEAEMVVSDLRDKVRA-AGDEWAEAAILYRTNNQ-----SQALEDA 373 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + +PY I + H ++ ++ + L + E +++ P I + Sbjct: 374 LRRKGIPYRIYKGNSFYDHKEIKDLLAYIRLVINPRDDEAFKRIVNYPA----RGIGDTT 429 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + + + + V L + + ++ A+ ++ Sbjct: 430 VERIALLAKARNLSM---WEAVDALTAEPVTDPVQKTIVRKVAEFVALVRGLSLARAEKG 486 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + IA + +R E L ++LN+ L + + EA + Sbjct: 487 LYDLGLEIATRS-------GIIGAYRAENTPEATSA--LDNIEELLNSMQLFNEQREAEI 537 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 Q + + + D ++ + V + T+ + Sbjct: 538 ------------RAGERQQEERATIEEWLQGVMLMTDMDKDDPQ-DRNKVTLMTVHSAKG 584 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + +K V ++G+ + ++P Q A D +++R LF AL A++ + Sbjct: 585 LEYKFVYIVGLEENLFPSQRAVESPDGF------------EEERRLFYVALTRAKELATL 632 Query: 730 SYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 SY + PS ++E+ ++ + + + Sbjct: 633 SYAEMRFKWGNMEFSRPSCFLREIDSRYLETDAMQEEREPVRRSAGR 679 >UniRef50_C7PL50 UvrD/REP helicase n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PL50_CHIPD Length = 1066 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 97/946 (10%), Positives = 236/946 (24%), Gaps = 140/946 (14%) Query: 105 REDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQ---YLVYRPDWLAQWETGHLVEGLGEA 161 +++ +L + D + + QL K D F + YR D + + + + Sbjct: 106 QDNLSLFDKHSLDPVSELEKIQLLKKLIDGFTKDNPLKRYRGDVYFEMKNLAQLFSTMKK 165 Query: 162 QAWQAPLWKALVEYTHQLGQPRWHRAN--------LYQRFIETLESATTCPPGLPSRVFI 213 + W + + R + + L + V Sbjct: 166 EGWTVDYINEAITAYIESLPSREDFIAKKAAGTYVRGDVRTDRIAREKEKMIRLQAAVEQ 225 Query: 214 CGISALPPVYLQALQALGKHIEIHL--LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFED 271 PVY + G++ + Y P LA + + ++ Sbjct: 226 F------PVYTAFMHTAGRYDFDDMINWVIGAFEEY------PDLLADYREKYQYILVDE 273 Query: 272 RELPLFRDSENAGQLFNSDG---EQDVGNPLLASWGKLGRDYIY--LLSD--LESSQELD 324 + + L VG+ + + G L ++ ++ + Sbjct: 274 YQDTSGTQNRLVQLLTEDQESPNIFVVGDDDQSIYRFQGASIENMALFAETFADNLHTIV 333 Query: 325 AFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR 384 + + ++ ++ + + E + ++ + Sbjct: 334 LTHNYRSVQPILDVAMSLIANNGNSRLVNQLPELDKQLIAAIPAAQSPVPVIRRYNTSRD 393 Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E+ + ++ +L + + P I V+ + + LP+ Sbjct: 394 EMTDITQQIARLL--EKGIAPGRIAVIYRENK-----YGEELARYCRQQQLPFYSKRSIN 446 Query: 445 RQSHPVLEAFISLLSLPDSRFV-SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 P +S+L LL + ++I + + E G R Sbjct: 447 LFEVPFARKVLSILRYLACEVDTPYSGDDLLFSILHYDFYNIPAIEVAKISIRAAEKGYR 506 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 Q + A Sbjct: 507 EKSSIRQ--------------------------------YLQEWAHTRNLTLFTAAPEQA 534 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 L + R + + V + + + + + + Q + E Sbjct: 535 LVDFSAMMEKLIRDAHNLTLQQLFAAVINECGVLSYAMQSPEKPWLMKVLQALFDFVKE- 593 Query: 624 LGAQYGDAVPLSLLRDELAQ----RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 + ++ D + + + +N+ T + + F+ V + G Sbjct: 594 -ETHRNPDLTIAPFMDMVDLMRHNGITIPLVQVSGNETGINLLTAHGAKGLEFEYVFIAG 652 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD--RYLFLEALISAQQKLYISYIGRSIQ 737 N ++ ++ + D+ R LF A+ A++ LYISY Sbjct: 653 ANAYLWEEKVKNGSGFSFPDTLFTTTLTSTDEQELRRLFYVAITRAEKHLYISYPEYRT- 711 Query: 738 DNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG 797 D PS+ V E++D +P + Sbjct: 712 DGKPLEPSLFVTEILDQHQ------------------------------LPVEKVIIPEE 741 Query: 798 ERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNF 857 + +A A ++ + + L + P+ +++ ++V Sbjct: 742 VQFRFAALDYTPELAPEIAKTDQPLIDNLLANFVMNVTALNNYLDCPLGFYYKNLVRVPS 801 Query: 858 RTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDA---------ERLFRRFRAAGDLP 908 ++ L L + E R F + Sbjct: 802 GRSEN------------TEFGSAVHYALEKLFLKMQESGRYEFPSKEEFIRDFTWSMLRN 849 Query: 909 YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLA-------CNGVQITGWLPQVQP 961 +F +E + + + + D P + + + NGV + G + +++ Sbjct: 850 RESFTRESFERRLEYGRDILDHYYDTWLPHWNKVVSVERNIRSVVVNGVPLKGKIDKLEF 909 Query: 962 DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWR 1007 DG + E+ + + + Sbjct: 910 DGN-LVNVVDYKTGDYEKTIKEYQKFVRPDQQHPHGGDYWRQAVFY 954 >UniRef50_B0P0N3 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0P0N3_9CLOT Length = 745 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 65/517 (12%), Positives = 162/517 (31%), Gaps = 86/517 (16%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDY 310 K+ K R ++ + + L VG+P + G D Sbjct: 237 KNKEIRLKWQKRLEYIMIDEFQDIDKIQYQLMKVLCGYHKNLFIVGDPDQTIYSWRGADI 296 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA---VAGVNIEEFSRSDNKRPL 367 YLL+ F PD + + + ++ + + P+ Sbjct: 297 NYLLN----------FDKAFPDVKTIMMNENYRSTPQILSVCNSLIDKNKNRMKKDLLPM 346 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 +S+ ++ + + E + + D+++ + ++D ++ +DI ++ + ++ Sbjct: 347 CHSKNSVLYYHGDTSEEESDWIADQIIKLHKKD--ISYKDITILYR-----AHYVTRTLE 399 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + +PY+I ++ +S L + + L +++VP + +I + Sbjct: 400 ETLLKKKIPYSIYSGIQFFERMEVKDALSYLRMITYK-DDLSFLRIVNVP----KRNIGK 454 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + + +L+ +VN ++ L + + Sbjct: 455 KRMEFLQAYVNAHHC--------------------SFYEALKECVEDPIFKGTDA----- 489 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + ++ + Q E + L + Sbjct: 490 -----------------KDFISLIDAFSVTYEQRTISEVLSDILDRSGYEEMLRTTGNQE 532 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + + + QA+ G+ L D +A + + + V + T+ Sbjct: 533 RLDNLAELKQAVYDY--EISCGEEALLPDYLDHIALFTNSDVTD---DSDKVKLMTVHAA 587 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F V L +N+G++P + +++R L A+ A + L Sbjct: 588 KGLEFPHVFLCALNEGIFPSKKTST-------------IEGMEEERRLAFVAMSRAMKSL 634 Query: 728 YISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 ++S D S R+PS + ++ + P D Sbjct: 635 FLSESHGKNFDGSTRYPSRFILDIDQKFLEYVKKPED 671 >UniRef50_UPI0000E87DAA UvrD/REP helicase n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87DAA Length = 725 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 55/516 (10%), Positives = 139/516 (26%), Gaps = 75/516 (14%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE-QDVGNPLLASWGKLGRDYI 311 P + + ++ + E L + VG+ + +G G Sbjct: 208 KPMIREHYQSIFKHILVDEFQDTSKLQYEWLKLLTAKNSFIFAVGDDDQSIYGFRGARPG 267 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLD 368 + N + ++ + N A I E N Sbjct: 268 NM----------KDLQKDFKINNIIKLEQNYRSKNNILNAANAIIENNADRLGKNLWSEA 317 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 I + + E + D + + I ++ + V Sbjct: 318 GDGDLIRQYNALDDRFETSYILDEIKGLHRSGS--RYDQIAILYRNNAQ-----SRVIEM 370 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A +PY + +++ ++ L L ++ L +++ P I + Sbjct: 371 AMVSNNIPYRVYGGLRFFERAEIKSSLAYLRLITNKKDDTAFLRIINFPP----RGIGAK 426 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L ++ N + + R+ + Sbjct: 427 ALELIQDVANA--------------------EKISLWQSAERIESENKNTKISFFVHLIR 466 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 ++ + + + + + +++ + ++++A E Sbjct: 467 HIEDQ--IEGNNIDESIDFINSYSTLKDHYGKDKDGSSRIENLDELVSAAKAYINEFREE 524 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 T + A LS D L+ + + + T+ + Sbjct: 525 NTEN------------ESGDSKASILSDFLDF--TSLESGELQASAGDDALQLMTIHSSK 570 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F V + G+ +G+ P + + + +++R L A+ A+QKLY Sbjct: 571 GLEFDTVFITGLEEGLCPH------------ERSLSENNGLEEERRLMYVAVTRARQKLY 618 Query: 729 ISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLP 762 ++ + PS + E+ + + + P Sbjct: 619 LTLAQSRLTYGQTMYNLPSRFLDEIPNELVKRINAP 654 >UniRef50_Q2J6E3 UvrD/REP helicase n=4 Tax=Actinomycetales RepID=Q2J6E3_FRASC Length = 1130 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 126/837 (15%), Positives = 216/837 (25%), Gaps = 100/837 (11%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIY 312 P R ++ + LF VG+P A +G G Sbjct: 303 PEVGRAERARAAVVLLDEYQDTSVAQRRMLTGLFGGGHPVTAVGDPCQAIYGWRGASVAN 362 Query: 313 LLSDLESSQELDAFVDV--TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 L + ++ +L L N A + RP Sbjct: 363 -LDHFPTHFPGADGTPAAVYELSVNQRSGGRLLRLANTVAAQLRARHRVVELRPRPDVAD 421 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 + S EV + +L ++ D P DI V+V I A+F +A Sbjct: 422 QGEAVVALHVSWADEVAWIAGQLRRVV--DAGTAPGDIAVLVRARGD----IPALF-TAM 474 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 LP + P + +++L + DS + ++ L + R + L Sbjct: 475 QAAGLPVEVVGLTGLLIVPEVAEIVAMLEVLDSPTANAALVRL----LTGPRVRLGPRDL 530 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 L + E G + A Sbjct: 531 AALGRHARE------------AARVPDPVGDPDLPGRSDPLAEAVADVDPADVVALSDVL 578 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 D+ ++ L RG E L+ V + L E Sbjct: 579 DDPGPQMSAPGRARVRRLAAEIAALRGHVGEGLLDLLHRVVATIGLDVELTATEVAVRAR 638 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER---ISQRFLAGPVNICTLMPM 667 E + L L + ER ++ A + + T+ Sbjct: 639 RQENVAAFLDVAAGFTDPDGTNSLPAFLGFLRAAREHERGLDVAGPSGADAIALMTMHRS 698 Query: 668 RSIPFKVVCLLGMNDGVYP------RQLAPLGFDLMSQKPKRGD---------------- 705 + + ++VV + + V+P + G + + D Sbjct: 699 KGLEWEVVAVPNLTSKVFPDLTVRDQWTTSPGVLPIPLRGDADDLPAFTVCAEKAALDAF 758 Query: 706 -----RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 + ++R L A+ A+ L+ S + R SV + EL ++ Sbjct: 759 RADARQYAEREERRLAYVAVTRAKSLLFASGHWWGPTQKTPRGASVFLDELAEHARTGGG 818 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQ------NYQPGERQSYAREWLPAASQAG 814 L A E A +P++P+ G A +P AS Sbjct: 819 LVDVWAPEPAERTNPALATPERFAWPIPYEPEPYARRLAAAEGVMARLAALSVPGASAEP 878 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWA-----------------HPVRAFFQMRLQVNF 857 P T E V L L R P +++ Sbjct: 879 AGEPFVDGPAGMTAAERVLLAELDREARLLLAEERAARLARTDVALPASLTASQIVRLRA 938 Query: 858 RTEDSEIPDTEPF---ILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE 914 E P + R + + + +R DLP A E Sbjct: 939 DPEAFARELVRPLPRRPVAAARRGTRFHAWVEEIFD-------YRALIDTEDLPGAADAE 991 Query: 915 IFWETQCQEMQQLADRVIACRQPG-QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLS 973 + + Q R+P +L G + G + V G RW Sbjct: 992 LTDDDLRSLQQAFLRTAYGARRPFAIEAPFELRLAGRIVRGRIDAVYDLGGGRWEVVDWK 1051 Query: 974 VAQGMQLWLEH----LVYCASGGNGESR-----LFLRKDGEWRFPPLAAEQALHYLS 1021 + L+ L + G S L++R R P L+ E+ L+ Sbjct: 1052 TGRSDADDLQLGIYRLAWARLRGVDPSAVDAAFLYVRTGAVVRPPTLSEEELADLLA 1108 >UniRef50_A8R903 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=A8R903_9FIRM Length = 729 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 81/686 (11%), Positives = 182/686 (26%), Gaps = 115/686 (16%) Query: 129 SKAADLFDQYLVYRPDWLAQWETGHLVEGLGEA----QAWQA--------------PLWK 170 ++ A L +Q +Y LA T + E A L + Sbjct: 38 TRIAYLIEQCHIYPNKILAITFTNKAAREMKERVEGFLGDTAQAVMISTIHSFCVRLLRE 97 Query: 171 ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL 230 ++ + + + + + + IS ++ A AL Sbjct: 98 DILVHGYPRNFTILDADDQRSILRDAYKQLQVDVKTYSYHRVLSYISNNKTNFIDANSAL 157 Query: 231 GK--------HIEIHLLFTNPCRYYWGDIKDPAYLA-------------KLLTRQRRHSF 269 + ++ + +G D + K R Sbjct: 158 ARANYEGERIMANVYAFYEKRLAEMFGLDFDDLLIFTYHILKEHVEVRKKWQRRFTYLHV 217 Query: 270 EDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVD 328 ++ + + L D VG+P + G + F Sbjct: 218 DEFQDVDMLQYQIIKMLVKEDSYLCVVGDPDQTIYTWRGAQV----------DIIMNFEK 267 Query: 329 VTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQRE 385 P + + + + A + + D I E Sbjct: 268 DFPHSHTVILNENYRSTQPILQASNELIKNNRNRIEKELFTRNESDERIVHFTAMDDYNE 327 Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 + ++L++ + RDI V+ ++ A D+++PY I Sbjct: 328 PIWVAGKILSLHHN--GVKYRDIAVLYRSN-----YLSRGLEKALLDQHIPYRIYGGVRF 380 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 ++ +S L +LA + + ++ L Sbjct: 381 YDRAEIKDALSYLR------------------LLAPKVEGDDKELFK------------- 409 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 N+ + + L A ++ + G E + Sbjct: 410 ----NLAVKRIINLPKRGIGAKTLETLEQEAAAKDTNMYEILKQGGFGKGKAKESIAKFV 465 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 ++ ++ ++ L V D L + + +++ I Sbjct: 466 EVIEACRSCVDTISIDQLLS---KVLEDSGYMEMLRNDAEIERLENLKELISDIANYVEN 522 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 L E++ D+E + V + T+ + + F V + + DG++ Sbjct: 523 ---NPDGSLLDYLQEISLYSDKEDLDNGEF---VQLMTIHAAKGLEFDRVFVYSLCDGIF 576 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI-GRSIQDNSERFP 744 P + + G + +++R L A A+++L++S G S + + Sbjct: 577 PNERSIN----------EGGQQALEEERRLAYVAFTRAKKQLFLSDSYGYSYVLDKLKTT 626 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCD 770 S V+E+ Q + D Sbjct: 627 SRFVKEIPQDCLQEVGAKPRNSFASD 652 >UniRef50_A0PR94 ATP-dependent DNA helicase n=12 Tax=Mycobacterium RepID=A0PR94_MYCUA Length = 1101 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 132/998 (13%), Positives = 246/998 (24%), Gaps = 139/998 (13%) Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 + +L+QL+ F+ YR + L + LV+ T QL Sbjct: 136 SETELWQLA------FEVVNGYRGELCT---QKTPAAVTATVLRLWGQLAEHLVD-TRQL 185 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFIC--GISALPPVYLQALQALGKHIEIH 237 L + P R+ + + L P+ L AL + ++ Sbjct: 186 RDTHIELERLVHALPAGPNQRDSGPNQWLLRMLVTQTERAELVPL-LDALHERMRAAKVM 244 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL-----FNSDGE 292 P +L +R R ++ + L + Sbjct: 245 DFGMQMAAAARLAATCPQVGGELRSRYRVVLLDEYQDTGHSQRIALSALFGGGVDDGLAL 304 Query: 293 QDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS--DILELENRAV 350 VG+P+ + +G G L + L L + ++ L L N Sbjct: 305 TAVGDPIQSIYGWRGASATN-LPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLANAIS 363 Query: 351 AGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED--PTLTPRDI 408 A + + D ++ + Q E + + D+L + ++P Sbjct: 364 AEPRRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSPPTA 423 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V+V +P A R +P + S P + +++L L Sbjct: 424 AVLVRRNADAAPI-----ADALVARGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGA 478 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 + + + R+ + + L + + A G T L Sbjct: 479 AAMRV----LTGPRWRLGGSDVAALWRRAVALVGGPQVGASVSPGAVAAAAGPDTDTACL 534 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 + ++ L A L + RR L + + Sbjct: 535 ADAICDPGPADWYSSAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRAAA 594 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 A L A A A A + + E+ L Sbjct: 595 TASGAWAGAEHLDAFADVVADYAERTAISAGSALSTKASVDGLLAYLDVAAEVENGLP-- 652 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS---------- 698 V + T+ + + ++VV + ++ GV+P + + Sbjct: 653 PAQLTVARDGVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGD 712 Query: 699 ----------------------------QKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 ++ D+ R D++R L + A+ + +S Sbjct: 713 RASVGALGIPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDTVLVS 772 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG--------DEALNCDESEARVKAHLTC 782 R PS + EL D I +S D A E + + Sbjct: 773 GHHWGATGLKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDRAPVAGERNPLLDDVVEA 832 Query: 783 LHTRMPFDPQNYQPGERQSYARE----------------------WLPAASQAGKAHSEF 820 + P + E W + Sbjct: 833 VWPTDPLATRRGDVERGARLVAEAISADAGVEAPAGGAAVADIEGWTADVDALLAERARA 892 Query: 821 VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQI 880 V P LP + + L PV + RL T I Sbjct: 893 VGPPTRALPNQLSVSGLVELARDPVG--ARQRLVHRLPTRPDP----------HAQLGNI 940 Query: 881 NQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEI-FWETQCQEMQQLADR-VIACRQPG 938 + GDLP A ++ E + A A Sbjct: 941 FHTWVQQFYGA-------ELLFDLGDLPGAADSDVGQVEDLAPLQEAFAGSPWAARTPIA 993 Query: 939 QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL-----------WLEHLVY 987 + ++ + G + V D + + + + + Sbjct: 994 VEVPFEMPVGDTVVRGRIDAVFEDPDGGATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAW 1053 Query: 988 CASGGNGESRL-----FLRKDGEWRFPPLAAEQALHYL 1020 A G ES + ++R L AL L Sbjct: 1054 AALRGCPESSVRTAFHYVRTGVTVIPDELPDGMALAEL 1091 >UniRef50_C5C915 ATP-dependent DNA helicase PcrA n=7 Tax=Actinomycetales RepID=C5C915_MICLC Length = 858 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 63/541 (11%), Positives = 141/541 (26%), Gaps = 100/541 (18%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-----------GEQDVGNPLLAS 302 P L R R ++ + L VG+ + Sbjct: 267 PRVLDNYRRRFRHVLVDEYQDTNHAQYRLIRLLAGPAGDPEGVETPGGELTVVGDSDQSI 326 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA-VAGVNIEEFSRS 361 + G D ++ F D + ++ + + A IE Sbjct: 327 YAFRGADIRNIVE----------FEQDFTDAVTIKLEQNYRSTQTILDAANAVIERNPDR 376 Query: 362 DNKRPLDPLDSSITFHVCHSPQRE--VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 KR + E + + + +++ + P D+ V Sbjct: 377 RPKRLWTAEGEGPAIVGYAAENESAEAEWIAATIDRL-QDEDGIRPSDVAVFYRTNAQ-- 433 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 R +PY + ++ ++ L + + +V +L+ P Sbjct: 434 ---SRALEERLVTRGIPYRVIGGTRFYDRKEIKDALAYLRVIVNPDDDVNVRRILNEP-- 488 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + + +A + Sbjct: 489 -----------------------------------------KRGIGDRAEGAVAAWAQRN 507 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNA 597 ++ + + GL A + + + ++ + P V ML A Sbjct: 508 RSTFSAALRDAEHAPGLAARSLKAVNGFVQMMDDLAQVAETAGPATVLEAVLEQSGMLAA 567 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-- 655 + + + + A++ LS +++A D +++ Sbjct: 568 LRESEDLQDESRADNLGELVAVVRSFEKTTPDGT--LSDFLEQVALVADADQLPTAPDVE 625 Query: 656 -------AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 G V + TL + + F VV L GM GV+P + D Sbjct: 626 GEALAEAQGQVTLMTLHTAKGLEFPVVFLTGMEHGVFPHARSMT------------DEKE 673 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEA 766 ++R L L A+++L+++ + PS + E+ + + + Sbjct: 674 LAEERRLAYVGLTRARRRLFLTRAEARSLWGQHQFNPPSQFLGEIPEALIDWEREGTTRS 733 Query: 767 L 767 Sbjct: 734 A 734 >UniRef50_C4FTG6 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FTG6_9FIRM Length = 1178 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 135/1082 (12%), Positives = 287/1082 (26%), Gaps = 168/1082 (15%) Query: 1 MLRVYHSN----RLDVLEALMEFIVERERLDDPFEPEMILVQST---GMAQWLQMTLSQK 53 ML+ + VL + I +E F LV M +L + K Sbjct: 1 MLQFVLGGLDRAKKSVLLDHLLDIQAKEPEAQFF----YLVPEHLKFDMESYLLAAVQDK 56 Query: 54 FG----IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFT 109 +G +I W + L E S+ + + +L+ Sbjct: 57 YGSNEAALVDIQVVSFKRLAWFLMPNSLAEEKPISSIGQIMLIKRLL------------A 104 Query: 110 LLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLW 169 + L + K + K A LFD+ + + + L + + A A L+ Sbjct: 105 RYQDQLQVFRGQVKHQGFAEKLAQLFDELYLGQIQPENLSQVPDLNQQEAKRLAELALLY 164 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 + ++ +H +++ P P+ + + LQ L Sbjct: 165 QGFIQEIEGQVLGHYHDLQRLDSYLKA------HPLNRPTYLVVDHHYFFNGQQLQLLTT 218 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L + C+ W S+ A + Sbjct: 219 LIQQ----------CQAVW--------------------------ITLPLSQQAARSKAY 242 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA 349 D +V R + L S L D T + + Q++IL L Sbjct: 243 DPLIEV-----------ARHTYGQMQLLAQSLHLPVAEDWTINQVQEGYQANILTLAQAF 291 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 + + S + + Q EV +++ ++ + RDI+ Sbjct: 292 ENHLRLAPQELSQPLNQVKTH----VIWEHDAIQTEVRHTSNKIHQLVSQ-EGYRYRDIL 346 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 V+ D+D Y P + A+F +PY HP++ S L L R+ D Sbjct: 347 VLTRDMDRYRPLVTALFEQ----NDIPYFYDHAVIMGQHPLVLWLESGLKLYRYRYQLAD 402 Query: 470 VLALLDVPVLAA----------------RFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 + +L + + + + L V +G E Sbjct: 403 IFGILKSGLWLPADLRAAMAENPQDGPVLEEEFKAQVDLLENVVLANGYVGYRFAQLSFE 462 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 + Y + + L L Sbjct: 463 WRFDQADRPYVNAAGQVTGQTYGQVVQALRESFLADFAPYQDLAQLTSFSGQKAAEWLYQ 522 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 W + + L + D + Q A + E + Sbjct: 523 WLEEVGVKDRLIARRDQAIE------KGDLALSRQYEQVWQTLTASLDEFYQLYGEAELT 576 Query: 634 LSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 S ++ L L++ A V + ++ + +KV +LG ++ P+ Sbjct: 577 FSEFQELLLTGLNEATFHIIPPALDQVMVTSMESPQVQAYKVCFVLGADELTLPKHHQED 636 Query: 693 GFDLMSQKPKRGD------------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 ++ + G+ + + + + L+SA +LY+SY+ Q Sbjct: 637 SLLSVANRQSLGESLLPYQQLRQSSQHNYSLELLMTQQVLLSASDRLYLSYVAMKGQ--Q 694 Query: 741 ERFPSVLVQELIDYIG---QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG 797 S +Q+L +++ S + + + + Q Sbjct: 695 TVKLSPYLQQLAKQFHLPIKTYTHTLIHQNQVKLSRLEFGRYPVQMSSLLQLVHHYSQQK 754 Query: 798 ERQSYAREWLPAASQAGKAHSEFV---QPLPFTLPETVPL---------------ETLQR 839 +R S A + H+ + LP+ + L++ Sbjct: 755 DRPSAAFLDFLTLMASQNPHTWVLLAQLFQFNQLPQNLTPETALALFGQKMTASVSKLEQ 814 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPD-TEPFILEGLSRYQINQQLLNALVEQ-DDAERL 897 ++ P F L++ R + + + L ++ Q+ + L Sbjct: 815 YYQDPYSHFLLYGLKIRPRQQLELNAAGAGDYYHDFLDKFTQAQEARPDFETNFASIQTL 874 Query: 898 FRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD------RVIACRQPGQSMEI-------- 943 + Q ++Q + + + + + Sbjct: 875 MAEDLRFNIFGTNPRMHLIKRKLDQHLRQFLNVSLAQSQALTVQPVATELVFGSKQEAGL 934 Query: 944 --DLACNGVQITGWLPQVQPDG-LLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFL 1000 L + + G + ++ D ++ + ++ Y + L + Sbjct: 935 ILPLDKGSLTLRGKIDRIDADPSQNYYQVVDYKSGKKTFNLVD--FYYGLDLQVLTYLKV 992 Query: 1001 RK 1002 Sbjct: 993 AS 994 >UniRef50_C9RKG0 UvrD/REP helicase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKG0_FIBSS Length = 803 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 64/509 (12%), Positives = 150/509 (29%), Gaps = 59/509 (11%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIY 312 P L K R ++ + + A L + VG+P +G G D Sbjct: 242 PEKLDKWRKRMMYVMVDEYQDIDGQQYCLADLLSSYHKNLFVVGDPDQTIYGWRGADINR 301 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR---SDNKRPLDP 369 +L F +Q++ + + + ++ RP+ Sbjct: 302 ILE----------FDQFHKGTKTILLQNNYRSTPSILKVPDAVIKNNKYRIEKVLRPVRA 351 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEED-----PTLTPRDIIVMVADIDSYSPFIQA 424 + F+ + + E + + +R+ ++ + +DI V+ Sbjct: 352 GGKTPVFYHAKNTREEAKWIVERIQNAVQNSVKNGAGGVHYKDIAVLYRMHSQ-----SR 406 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 A +PY + ++ I L + + ++ P + Sbjct: 407 SVEEALMSESIPYKVYSGVGFYQRKEIKDIICYLRMLVY-ADDLSFIRTVNTP----KRQ 461 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 + + L+ + + + G+ + + + T+ L + Sbjct: 462 FGPKKMAILQAFADTRKV--GLYEALLEIVYEAGRLNDVAPDVTTQAELSSVGNDHRKID 519 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 + S ++ + + +R R E + R+ L Sbjct: 520 FDCKEFLSRS--------NVVEYVKLIEKYRSRYKDMRVSELLSKMLRETKYEEMLRLDG 571 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 E + + + Q I+ Y + L + + + SQ V + T+ Sbjct: 572 DEDRLDNLAELKQGILEF--ENYYEEDASLDEYLQNIVLFTNADEDSQE--KDRVQLMTI 627 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + + F V + G+N+G +P + + + +++R L A A+ Sbjct: 628 HNAKGLEFPYVFVCGLNEGFFPVKRVQN-------------KMQLEEERRLAYVAFTRAE 674 Query: 725 QKLYISYIGRSIQDNS--ERFPSVLVQEL 751 L +S R+PS + E+ Sbjct: 675 NVLCLSDAE-DGVAGESGSRYPSRFLLEM 702 >UniRef50_A7NGD4 UvrD/REP helicase n=11 Tax=Chloroflexi RepID=A7NGD4_ROSCS Length = 759 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 72/556 (12%), Positives = 148/556 (26%), Gaps = 66/556 (11%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIY 312 PA L + R ++ + QL + VG+ + + G D Sbjct: 207 PAVLERYQERYGFLLADEYQDTNRAQYVLLKQLASRHHNIFVVGDEDQSVYAFRGADIRN 266 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR----AVAGVNIEEFSRSDNKRPLD 368 +LS F P+ + ++ + + + R + Sbjct: 267 ILS----------FERDYPEAQVILLEQNYRSTQAILDVAQAVINRSAQRRRDKRLWTRN 316 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + + E +++ + ++ P DI +M Sbjct: 317 GEGVLVQVIEGYDQDEEAQLVAGEIARLIA-GGAYQPGDIAIMYRTNAQ-----SRAIEE 370 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A R PY I ++ ++ L L + F + +L+ P I + Sbjct: 371 ALIARQAPYIIVGGTRFYERKEIKDALAYLRLALNPFDDISLSRVLNWPA----RGIGQR 426 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L + + + + + A Q T Sbjct: 427 TQEDLERRAGAAAVPLYVMLHTLAANAEAAADQTTSP----------------------- 463 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + + + L L ++ + + L + Sbjct: 464 APARTGEMPSRARNALLGFLTLIDESLDRRQTLSLGALMDWLFERVGFREALRREYGDEE 523 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAV-PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + LS +E+A D + + + V TL Sbjct: 524 GDDRWNNVMELRNVAEQYADLPLASQLSTFLEEVALVSDIDTLQEE--RNAVTCITLHQA 581 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F VV L+G+ +G+ P + DR D++R LF A+++L Sbjct: 582 KGLEFPVVFLVGLEEGLLPHARSAD------------DRDALDEERRLFYVGATRAKERL 629 Query: 728 YISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 Y+ + R PS + ++ + Q G A A + Sbjct: 630 YLLHAFRRATYGRTEIATPSRFLHDIPPDLLQRAPKRGYAAAQMVTGRAAALRNPRRNQA 689 Query: 786 RMPFDPQNYQPGERQS 801 P P + P ++ Sbjct: 690 -APVSPHSAAPDGPRA 704 >UniRef50_Q6MAS4 Probable ATP-dependent DNA helicase, mutU n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MAS4_PARUW Length = 668 Score = 219 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 73/572 (12%), Positives = 158/572 (27%), Gaps = 94/572 (16%) Query: 216 ISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELP 275 ++ + LQA + + P L R R ++ + Sbjct: 167 HNSFVQDVYRRLQASMRAYNAVDFDHLLSLTVELLERFPDVLEAYQERFRYMMIDEYQDT 226 Query: 276 LFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL 334 A L + VG+ + +G G D +L Sbjct: 227 NPIQYRLASLLTSKYQNLCVVGDDDQSIYGWRGADVKNILE--------------FEKAT 272 Query: 335 LHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHD 391 + ++ + A A ++ ++ I + E +V+ Sbjct: 273 VIKLEQNYRSTNFILKAANAVIDHNQYRHKKKLWSEKGEGHPIEVFHTPNELEEAQVVVK 332 Query: 392 RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD----------RYLPYAISD 441 R++ M +E L +D ++ + F +A + +PY I Sbjct: 333 RIVKM-KESLNLQWKDFAILYRSNA-----LSRQFETALMRQVWKFQNRWIQGIPYEIFG 386 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 ++ + L L + E +L +++ P R I E+ L L + Sbjct: 387 GTEFYERKEVKDLCAYLRLIINPADQEALLRIVNQP----RRGIGEDSLDLLTTHNRQF- 441 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 ++ + G + G A + + A+ Sbjct: 442 --------QRPLWDVLKEVANQKGEGAKLIYHGKAFKGICEFTHLISE--------AKKR 485 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI-- 619 +L L + ++ ++E + +++ + Q Sbjct: 486 FQEGNLAENLKWLIEQINYQKAIKE---------------EVKSQQMRDFKWENIQEFVS 530 Query: 620 ----IAEGLGAQYGDAVPLSLLRD--ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + L + + +Q + R V++ T + + F Sbjct: 531 SLAEFEQQAQLNPDLESSLENFLGNMYVDNKFNQSTKNNRH-EDRVSLLTFHSAKGLEFP 589 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 V L+GM D + P K + +++R L A+ AQQ L IS Sbjct: 590 VCFLVGMEDHIIPH-------------EKSMKETGIEEERRLMYVAITRAQQHLTISMAQ 636 Query: 734 RSIQDNSER--FPSVLVQELIDYIGQSHYLPG 763 + + + PS + E+ + + Sbjct: 637 QRKRMGKDMASRPSRFLFEIPKELLKMTDWRN 668 >UniRef50_C9RM93 UvrD/REP helicase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RM93_FIBSS Length = 843 Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats. Identities = 63/528 (11%), Positives = 134/528 (25%), Gaps = 83/528 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD--GEQDVGNPLLASWGKLGRDYI 311 P +L R + ++ + E L N D VG+ + +G G + Sbjct: 233 PNLAEQLRERFQYVVVDEYQDTNDVQYELLKLLINRDTKNVTVVGDDDQSIYGWRGANI- 291 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS-----DNKRP 366 + + F + ++ + N ++ + N Sbjct: 292 ---------KIIRNFHRDFAPVTIVKLERNYRSTANIVKGAGSVIAHNVRPAEMQKNVFS 342 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 + I + E + + + + V Sbjct: 343 KEEAGELIHVRYFEDDRAEASNIAKT----VAQAGPDFYAKTAIFYRTNAQ-----SRVL 393 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 A D +P I ++ ++ L + + L +++ P I Sbjct: 394 EKALNDLRIPSVIFGGTRFWDRKEIKDVLAYLRVLANEKDDAAYLRVINTPP----RAIG 449 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + + +L W + Sbjct: 450 KTTVE---------------------------------------GVLAKVKAGEGSFWDN 470 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGL-AQERPLEEWLPVCRDMLNAFFLPDAET 605 +L +G A L + W+ + + E PL + E Sbjct: 471 LLAEANGTGRGA---PKLKVFTDLVTNWKNMMTSGEYPLPILAEHIINDTGYKDFLRKED 527 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDA-VPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 E +I L +++ D ++ G V + T+ Sbjct: 528 EVTADERIANLDEMINAIREFDEEHPGATLDAFLQDISLLTDGDK-KVDTSKGLVTLMTI 586 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + + F V L G +D ++P M++ + +++R LF A+ Sbjct: 587 HMAKGLEFNTVHLAGCDDEIFPLVRG-TSMLSMAEI-----NEQMEEERRLFYVGCTRAE 640 Query: 725 QKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 +KLY+ + R PS ++EL + D Sbjct: 641 KKLYLYHAERRFFQGNIRPFAPSRFLKELDPSVVDFTPCLNTRPSVPD 688 >UniRef50_Q7UIR9 ATP-dependent DNA helicase n=2 Tax=Planctomycetaceae RepID=Q7UIR9_RHOBA Length = 787 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 70/544 (12%), Positives = 150/544 (27%), Gaps = 89/544 (16%) Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 P Q L A + L ++P + L + + ++ + Sbjct: 171 PVYQQQLLTANAVDFDDLLFHFARLLR-----ENPEVRSNLDEKLKYIMVDEYQDTNLAQ 225 Query: 280 SENAGQLFNSDGEQDV-GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNI 338 L V G+P + +G G D +L F P + Sbjct: 226 YAIVRALSVDHPNLAVTGDPDQSVYGWRGADLNNILD----------FEKDYPAVKTVRL 275 Query: 339 QSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA 395 + + A + + N +P ++T +E + + D + Sbjct: 276 EQNYRSTPEILRVADQLIRHNRRRKQKNLFTDNPTGEAVTLRQYEDGYKEADGIADEIAN 335 Query: 396 MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 + PRD +M + A +R +PY I + ++ + Sbjct: 336 QMIAG-NAEPRDFAIMCRMNA-----LTRSIEHALRNRGIPYQIVNGLEFYQRKEIKDLL 389 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 + L L ++ +++ P I + L +++ Sbjct: 390 AYLHLINNPRHDVAFQRVINTP----TRGIGAKTLERIQR-------------------- 425 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 +A + ++ DE L + S + + Sbjct: 426 -------------------FADDHRIPMLEAARRVDEIDTLSKRAKTLVTSFIRLYDRL- 465 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI-EQQWQAIIAEGLGAQYGDAVP- 633 + LE+ L + + + T I+ + Sbjct: 466 -CIKATATLEDLLRFLIEEIKFVAYLERTTPEQQDNNPIANVDEFISAAVEFDQMHPEDG 524 Query: 634 -LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L +++A D + V + TL + + F V ++ + D + P Sbjct: 525 SLEAFLEQVALVSDTDAF--EDSNNRVTLMTLHAAKGLEFPRVFIIAVEDNLLPH----- 577 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQE 750 + + D ++ +++R L + A+Q L ISY PS+ + E Sbjct: 578 -------RRSKEDETQLEEERRLLFVGVTRAEQWLQISYAKLRSFRGENQPAIPSMFLGE 630 Query: 751 LIDY 754 L Sbjct: 631 LPRD 634 >UniRef50_Q4A5L9 Atp-dependent helicase n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A5L9_MYCS5 Length = 734 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 71/638 (11%), Positives = 193/638 (30%), Gaps = 79/638 (12%) Query: 155 VEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFIC 214 ++ L + Q Q K + A L L + Sbjct: 119 LDELDKKQVLQDLYVKNKITNHEVSYSNM---AKYISWAKNNLLDQKDLIAELEKQFSGD 175 Query: 215 GIS-ALPPVYLQALQALGKHIEIHLL-FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDR 272 +S + VY L + + + C+ P AK+ ++ Sbjct: 176 AVSKTIANVYQDYLNYMAEKGALDFDDLILHCKTLLE--MHPNVAAKIARYFNYILVDEF 233 Query: 273 ELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTP 331 + + ++ + S VG+P + G +L+ F ++ Sbjct: 234 QDTSDLQFDILEKIIDKSSQLTIVGDPDQTIYNWRGASVDLILN----------FENIFE 283 Query: 332 DNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEV 388 ++ + ++ + + + + S + + + I F+ + + E + Sbjct: 284 NSKTIVLDTNYRSTKKILASANKLIKNNKNRFSKDLITNNDEGNDIEFYHAFNTEAEAQW 343 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 + ++ + ++ + ++I+++ + F A + Y I + Sbjct: 344 VISKIKLLKKQKHQI--KNIVILYRSN-----YYSRAFEDALLGEGINYKIFNGYKFYQR 396 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 ++ ++ L ++ S + +++VPV I + + + Sbjct: 397 TEIKDVLAFLKTILNK-DSIALKRIINVPV----RGIGPKTVEKI--------------- 436 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV-GHLASL 567 +A ++ + ++ + + L E++ + Sbjct: 437 ------------------------EAFAEKNKISLYDALFTHFKELPLGKEIILKKIYPF 472 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 + L + + ++++ PL + LN + + + + +I+ + Sbjct: 473 IKILRKY-QLISEKYPLPVITQKLLEELN-YLEQIKGNQNENQNAIENVKELISVSMKNY 530 Query: 628 YGDAVPLSLLRDELAQ-RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 + + D L Q L V++ T+ + + F V ++G+ +GV+P Sbjct: 531 FETNKE-ATAIDYLNQVSLLSTTGEDVEGDDFVSLMTIHASKGLEFDNVFIVGLTEGVFP 589 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD--NSERFP 744 K K +++R L A+ A++ L++S S+ E+ Sbjct: 590 NYKHLEDAKENKHKTKTELNKGIEEERRLAYVAITRARKNLFVSDSRGSVYAPIIHEKQT 649 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 S ++E+ + E + Sbjct: 650 SRFIREMGIDFESFLVDKTSKFSRYLSEEENKNIKIIV 687 >UniRef50_B9KXW3 ATP-dependent DNA helicase pcrA n=2 Tax=Thermomicrobia (class) RepID=B9KXW3_THERP Length = 771 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 87/649 (13%), Positives = 169/649 (26%), Gaps = 82/649 (12%) Query: 152 GHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLP--- 208 G + Q L K + Q R L + + ++ P L Sbjct: 146 GLEPAFTIYDEEDQLALVKQALRDLGLDPQRFSPRMLLGR--LSRAKNDQHSPSDLQSMA 203 Query: 209 SRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHS 268 + + + Y Q LQ LL + + P LA R R Sbjct: 204 QSYWDEVAARVYERYAQYLQRAQAVDFDDLLLRTVELF----TEYPDVLAHYQDRWRYLQ 259 Query: 269 FEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFV 327 ++ + + QL + VG+P + + D +L F Sbjct: 260 VDEYQDTNRLQYQLVRQLASGHRNLCVVGDPDQSIYSWRQADIRNILE----------FQ 309 Query: 328 DVTPDNLLHNIQSDILELENRAVAG---VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR 384 PD + + + A + + +P I C Q+ Sbjct: 310 RDFPDATVIRLGRNYRSTPQIVAAADAVIRVNRQRIERPLWTENPPGPPIRLLACWDEQQ 369 Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E E++ + ++ RDI V+ A R +PY + Sbjct: 370 EAEMVVSEIDRLVRTG-NARYRDIAVLYRINAQ-----SRSVEEALVRRQIPYQVIGGVR 423 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 ++ ++LL + + + +L I E+ L L QW Sbjct: 424 FYERKEIKDALALLRVLVNPRDWLSLRRVLSETAFG--RGIGEKTLLQLEQWGQRQQCSP 481 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 + E A R L G + + Sbjct: 482 ADVLLLLVEEREEAPALAAATVRRLRELGGELVRLRAAMVE------------------- 522 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 L + + + TE Q ++++ Sbjct: 523 --------------HPASQLFDLALERSGLAARYRDASDPTERERWENLVQLRSVLERYD 568 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 + +PL + L V + TL + + F VV L+G+ +G+ Sbjct: 569 TVPAAEGLPL--FLE--EAALVAAIDEAEMSGDQVTLLTLHAAKGLEFPVVFLIGVEEGL 624 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SER 742 P A + ++ + F + A+++LY+SY + Sbjct: 625 LPHARALESEAELEEERRL------------FYVGITRAKERLYLSYCSSRNRFGLRERC 672 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 PS + +L + ++ + + +P Sbjct: 673 LPSHFLDDLPPDVVEAGSRASERVPRVAPPAGGHAGPVESSAPVVPRLR 721 >UniRef50_B6QHN1 ATP-depentend DNA helicase, putative n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QHN1_PENMQ Length = 1006 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 72/674 (10%), Positives = 176/674 (26%), Gaps = 79/674 (11%) Query: 188 NLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYY 247 + +R ++ L + P SR+ + + A F R Y Sbjct: 123 AIIKRIVKRL-NLNIQPNPARSRISSQKAQGISWQ--DLIDARHPKSVDQQEFVQVYREY 179 Query: 248 WGDIKDPA------------YLAKLLTR----QRRHSFEDRELPLFRDSENAGQ-LFNSD 290 + L + + ++ + E + Sbjct: 180 EAALASSNLLDYDDLLLRCVDLLRQHPHCVSNVQTVLVDEFQDTNVIQYELMNLFAAQNK 239 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE---LEN 347 VG+P + +G + L + P+ + ++ + + Sbjct: 240 RITIVGDPDQSIYGFRSAEIKNL----------ERMQRRYPNTSVVLLEDNYRSSGSILG 289 Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE-EDPTLTPR 406 A + + P + + + E + + + + L Sbjct: 290 SAEQVIEQDTARPVKKLHPTHGVGTMPVLRKLPTAAAEAQWMVMEIKRCITLTGQLLKSS 349 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 D +++ + S + +PY + + + L + Sbjct: 350 DFAILLRSAA-----LSRQIESELGKQGIPYRMVGGSRFFDRVEIRLLLDYLRVISHPEN 404 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 ++ + +++VP I +E L+ L + + +V + + Sbjct: 405 NDALARIINVP----TRKIGDETLKSLTAGAESANLPLWTFIKDVAQGRRSCQKGLSKAA 460 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 + +L +E+++ + + L ++ +R L PL+E Sbjct: 461 NIGLSVLVGLIEASRQKLHD--------CIDESSPRVLLEFVISKLGFREYLTATYPLDE 512 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 + ++ + + + I + LS +A + Sbjct: 513 --ENRWANVEELLAQAGDSSTSYSQQDDILPEIEGLEQHQGHIGEEALSRFLANVALSTE 570 Query: 647 QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR 706 V I T+ + + + VV + + +G+ P A Sbjct: 571 VTTEEGDQPQEKVTISTIHAAKGLEWPVVFVAAVYEGIIPHSRAEDS------------- 617 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL----------IDYIG 756 D++R L A+ AQ LY+S R ++ E S + + Sbjct: 618 ---DEERRLLYVAMTRAQALLYLSLPRRDSKNGEETRTSSFLPPSIVEAKFRAIGPKLVD 674 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 ++ + D S+ + L + D A W + + + Sbjct: 675 KTIFAIADILGREHPSQEAIVKGLQARLPSLNDDLWTPDGDYTGDTATRWDGSTASSSLD 734 Query: 817 HSEFVQPLPFTLPE 830 Q Sbjct: 735 ARGQAQEHWTKRRR 748 >UniRef50_A6GB18 ATP-dependent DNA helicase PcrA n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB18_9DELT Length = 845 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 75/563 (13%), Positives = 145/563 (25%), Gaps = 76/563 (13%) Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLE 318 L R ++ + +E L VG+ A +G G D +L+ Sbjct: 259 LRRRFFHVVVDEFQDTNPVQAELVELLCGPSAQLCVVGDDDQAIYGWRGADVKQILN--- 315 Query: 319 SSQELDAFVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSIT 375 F D P + ++ + + A A + S Sbjct: 316 -------FPDRHPGCEVIRLEQNYRSTTHILDCANAVIRGGARRHSKRLWSDLGPGERAE 368 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 H + E + + R+ + D +P +I V P A + Sbjct: 369 LHGFADERDEAQYVARRVRRAI--DEGESPGEIAVFYRTHAQSRP-----LEEAMRLAGV 421 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 Y + ++ I+ L L + D L +++VP I + L Sbjct: 422 RYRMLGGIRFFDRREIKDLIAYLRLLTNPGSDLDCLRVINVPA----RRIGARTIERLSA 477 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 W + ++ A G Sbjct: 478 WA---------------------------------ISKESSLYDACGPASKHGEEAGLGR 504 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 + V L+ L L+ L +L E + Sbjct: 505 AAVKAVKGFWELVEGLRDDSEELSHHETASLVL------GRTNYLESFAAEQDAETRTEN 558 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 L + L Q + + + + T+ + + F V Sbjct: 559 LYEFRGALEEFGEEQPDV--SLAEYLEQISLAAGGDEATVDAAITLMTIHSAKGLEFDRV 616 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 L GM + V+P + + R +++R L A+ A++ L +S++ R Sbjct: 617 MLTGMEERVFPHVRSLDPENPKG-------REALEEERRLAYVAISRARRWLSLSFVERR 669 Query: 736 IQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 S + PS ++ L + L + + A + + DP+ Sbjct: 670 FLWGSTQLNEPSRFLRALPEEGIVRKGLALKQNKQRARALAP-RRREPSWDDDIELDPEY 728 Query: 794 YQPGERQSYAREWLPAASQAGKA 816 G +A Sbjct: 729 RDDGSIGRVRTRSTRSARSKRTE 751 >UniRef50_Q3A0S9 ATP-dependent DNA helicase PcrA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0S9_PELCD Length = 737 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 83/685 (12%), Positives = 165/685 (24%), Gaps = 111/685 (16%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA---------WQA--------PLW 169 L+ + A L Q V LA T + E W + L Sbjct: 37 LTHRIAYLIQQQQVEPWQVLAVTFTNKAAAEMRERLQSLVGNIDGLWISTFHAACARILR 96 Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA------LPPVY 223 + + + + + + L L R I LP Y Sbjct: 97 RDGEVLGYGRDFTIYDDQDQQRLIKDCLAQLRITEKDLKPRAVATAIDQAKNRGLLPEEY 156 Query: 224 -------------LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFE 270 + Q + + + R + Sbjct: 157 IPGDHRGEQVARVYELYQKRLQQANALDFGDLLLQTVRLFREYSHIRDAYRRRFAHLLVD 216 Query: 271 DRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV 329 + + L + VG+ + + G + +L+ F Sbjct: 217 EFQDTNQVQYAMVKALADDGRHLCVVGDDDQSIYAWRGAEIGNILN----------FERD 266 Query: 330 TPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREV 386 P + ++ A + + +P +T E Sbjct: 267 FPGASVIRLEQHYRSSATILEAAGEVVACNIGRKGKTLWTDNPAGEPLTLEPLPDDLEEA 326 Query: 387 EVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 + + + D RD+ V V LPY + Sbjct: 327 RFVAAEIARL--RDAGRHLRDVAVFYRTNAQ-----SRVLEETLVREGLPYVMVGGVKFY 379 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 + ++ ++ L + S +++VP I + + E+G Sbjct: 380 ARMEIKDVLAYLRALANPADSLSARRIVNVP----SRGIGAVTTGRIAEHEEEAGGFLAA 435 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 + L M + Q E SG Sbjct: 436 CRLCLERGVLKGAAAKKVAAFSAFMERFAQRMTEVPFPQLTADLLEESGYAP-------- 487 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 R + + ++A Sbjct: 488 ------NLREEAQSAMT-------------------EGERKEAKGRLENLEQLLAGMEEH 522 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 Q ++ L +++A D + R V + TL + + F VV + GM +G++P Sbjct: 523 QATES-SLQEYLEQVALVTDLDSYDTR--LDRVTLMTLHAAKGLEFPVVFMTGMEEGIFP 579 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--P 744 G+R +++R L + A QKLY+++ R ++ P Sbjct: 580 HG------------RAAGERDDVEEERRLCYVGMTRAMQKLYLTHARRRRIYGDYQYNAP 627 Query: 745 SVLVQELIDYIGQSHYLPGDEALNC 769 S + E+ ++ P + Sbjct: 628 SRFLAEIPPHLMGDKPAPALQKPAT 652 >UniRef50_B9KCT9 ATP-dependent DNA helicase n=1 Tax=Campylobacter lari RM2100 RepID=B9KCT9_CAMLR Length = 687 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 63/506 (12%), Positives = 154/506 (30%), Gaps = 90/506 (17%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRD 309 ++D A+ + + + ++ + + +L S VG+ + +G G Sbjct: 201 LEDEAFAKEQSQKYTYITVDEYQDTNALQYQILKKLCASHENICVVGDDDQSIYGWRGAK 260 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL-ENRAVAGVNIEEFSRSDNKRPL- 367 +L+ F + + L ++ + A IE + K + Sbjct: 261 IENILN----------FKEQFNNVKLVKLEQNYRSTSAILQAANELIEHNRKRLGKTLIC 310 Query: 368 -DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 IT + E + + +L + + P +I ++ + Sbjct: 311 TKDEGEEITILQNDDEKIESFKVAREVSKLL--NSGINPSEIAILYRVNA-----LSRAL 363 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 A + +P+ + ++ IS L L + +++ P + + Sbjct: 364 EEAFSKEKIPFKLLSGIRFYERAEIKDIISYLRLLSNLNDDYSFKRIINRP----KRNFG 419 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 L L YA E+ ++S Sbjct: 420 NASLEKLEN---------------------------------------YAKENHLSLFES 440 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 + S + L ++ ++ + + + + F+ + E E Sbjct: 441 LCALQGSGFFSKKTDKELEKFILSMHKIKEKDDLLAMILALEEEFK--IKEFYKDNPEGE 498 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + I++ + + + Y L + +E++ +Q+ + + + I ++ Sbjct: 499 DKLLNIDELYANLKDKISHGNYNG---LDDILNEISLLNEQDGLDKE----SICIMSIHA 551 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F V ++G+ +G +P S +++R L A+ A++K Sbjct: 552 SKGLEFDYVFIIGLEEGFFPLTSES---------------SNIEEERRLAYVAITRAKKK 596 Query: 727 LYISYIGRSIQDNS--ERFPSVLVQE 750 LY+SY S S E Sbjct: 597 LYLSYANSRFYKGSRTRLEKSRFFGE 622 >UniRef50_A5IY88 ATP dependent helicase n=2 Tax=Mycoplasma RepID=A5IY88_MYCAP Length = 734 Score = 217 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 74/571 (12%), Positives = 178/571 (31%), Gaps = 91/571 (15%) Query: 223 YLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSEN 282 Y + L+ L LL +Y K+P + K + ++ + E Sbjct: 196 YNEQLKHLQSLDFDDLLIKVNELFY----KNPEIVKKWALKYSYILVDEFQDTSAIQYEI 251 Query: 283 AGQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD 341 L + VG+P + G D +LS F + + + Sbjct: 252 IKYLSSQKAQLTIVGDPDQTIYRWRGADVNLILS----------FEKDFENTKTIILNKN 301 Query: 342 ILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 + A N+ + N + I + SP+ EV + ++ + + Sbjct: 302 YRSTKKILAAANNLIKYNRNRFNKNLVTDNSDGDEIEYIHAFSPEAEVRWVVQKINDLKK 361 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 + + ++I + F + + Y I ++ ++ L Sbjct: 362 Q--KIQLKNIAIFYRSNSYSRN-----FEEQLMNEKINYKIFGGEKFYQRKEIKDALAFL 414 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + + +++VP I E L + Sbjct: 415 RVIYDGND-LQLKRIINVPP----RKIGEASLNKII------------------------ 445 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 +A E +++++ + + + E++ ++ +LL +N ++ L Sbjct: 446 ---------------SFANEKNLSLYKTLVNHYKELPVPKEVIINIIALLNCVNKYKAAL 490 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP-LSLL 637 Q + L + + + T E+ +A++ + + L Sbjct: 491 RQGNKIHVVLKSFLKEIGFLKYVNEDVGLKGTG-EENIRALLEGIKSWEITNPNKGLKEY 549 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 + ++ L S V++ T+ + + F V L+GM + ++P Sbjct: 550 FEYIS--LISASDSSNESMSYVSLMTVHAAKGLEFDNVFLVGMCENIFPN---------- 597 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS-ERFPSVLVQEL----- 751 +++R L A+ A++KL++S + + E+ PS ++E+ Sbjct: 598 --YRAYKVAEAMEEERRLAYVAITRAKEKLFVSDSRGLLLYSQTEKKPSRFLKEMGIDIN 655 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 + + + + D L +E + + Sbjct: 656 KHILQKDNSIFVDGELEDEEQIRKRNKKIIA 686 >UniRef50_A9ETX5 ATP-depentend DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9ETX5_SORC5 Length = 820 Score = 217 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 82/698 (11%), Positives = 188/698 (26%), Gaps = 79/698 (11%) Query: 150 ETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPS 209 G + Q + +++ + + R + R + Sbjct: 119 AAGLDKNFIIYDDDDQRAVMNRVLKELNLDDRRYPPR-QVLSRIHAEKQEGRGPAEFERK 177 Query: 210 RVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSF 269 F I+ Y + L+A LL + L R R Sbjct: 178 GYFDDAIARCFEAYERHLKAASAVDFDDLLLAVLR---IAEDPTSYAGEDLRGRFRHVLV 234 Query: 270 EDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVD 328 ++ + + D VG+ + + G D + + F Sbjct: 235 DEFQDVNQVQYRLVRAFCKSHDNLCVVGDDDQSIYRWRGADV----------RIVRGFRR 284 Query: 329 VTPDNLLHNIQSDILEL---ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQRE 385 P + ++ + + A+ + + + I S E Sbjct: 285 DFPHATVVKLEQNYRSIGHVVRGALGVIRHASDREPKELWTANQDGAPIDVVAADSEHDE 344 Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 + + + ++ ++P +I V V + +PY I Sbjct: 345 AAWVVECVRELIA--EGVSPNEIAVFYRIHAQ-----SRVLEEVLREARIPYQIIGGTRF 397 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 ++ +S L + + D+ +++VP I + + L Q + G+ Sbjct: 398 FERAEVKNLLSYLRVIANPKSDVDLNRIINVPA----RKIGQSTVDKLIQAADLLGV--- 450 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 + + +L G SA + + Sbjct: 451 -----------------SLFEAIDPLLEGRVPPSAMP----GGQLPPLASAAKRSLLGFR 489 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA-EGL 624 L+ L + + EE L E+EA + + + Q+++ E Sbjct: 490 DLIHGLMTEAKSASPSALAEEVLARSGYAKALEQEDSVESEARLQNLRELVQSLVDYEQE 549 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 GD L+ + ++ D + ++ V + T+ + + F V L GM + + Sbjct: 550 ATAAGDEATLAGYLERVSLVSDVDALADVP---KVAMMTIHAAKGLEFHAVFLTGMEEDL 606 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER-- 742 +P + + +++R L A+ A+++L+I++ R R Sbjct: 607 FPFRSQD-----------PNRKGDIEEERRLAYVAITRARERLWITHAARRAIFGQTRYG 655 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC---------LHTRMPFDPQN 793 PS + +L + P + + + Sbjct: 656 LPSRFLADLPPASVRPIATPASMMAQRRVEGGFGGGGGYAAPGLRFGGQERSWEGRERRP 715 Query: 794 YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET 831 + + + A A + + E Sbjct: 716 GAQADERFAGARFSREGEPARGAMARGMDVPDRAPGER 753 >UniRef50_Q6XYV7 ATP-dependent DNA helicase n=2 Tax=Spiroplasma RepID=Q6XYV7_SPIKU Length = 729 Score = 217 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 79/602 (13%), Positives = 180/602 (29%), Gaps = 85/602 (14%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 A Q + + + + + A + + FI L++ P + V + Sbjct: 114 DMADQDSIIRNIYKRLPMKYDAQE--AKMVKNFISKLKNDFISPNSAKTSVNGDEMRW-- 169 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 + + I Y + L K R ++ + Sbjct: 170 AEVYDTYEKRLREINSVDFNDLILLTYKLFKNNGEVLKKWQNRFDYFLVDEFQDTNELQF 229 Query: 281 ENAGQL-FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQ 339 + L ++ VG+P + G +L+ F P + Sbjct: 230 DIIKWLVGDNSNITIVGDPDQTIYSWRGAKINLILN----------FDKYFPHTQTIVLN 279 Query: 340 SDILELENRAVAGVN---IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 + ++ N + N + + + E + + ++ + Sbjct: 280 ENYRSTQSILSLANNLIIHNKNRIEKNLFTIKASGQLPILYHGANSSDESDFVARKIKTL 339 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + ++ DI+++ + ++ +A AD + Y I ++ ++ Sbjct: 340 I-KEENYDYNDILILYR-----ANYLSRDLETALADYGISYRIFGAFKFYERKEIKDALA 393 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 L + + L +L I + + Q + + I + + +L L Sbjct: 394 FLKIIMNND------FLAIERILLLIPKIGPKTFEQIMQILKDQQIMFTTLLEQHFDL-L 446 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 P QH+ ++L A Sbjct: 447 PLNLQHSLNKVREAIVLALA---------------------------------------- 466 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 L + +E L + D E + I + G Q + + Sbjct: 467 QLPTVKSIESLLVLLLDKTGYLQRLR--DNYEEEREENILELIASIGKFDQQNKELAGTE 524 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 L E Q + + S +++ T+ + + KVV ++G+N+G++P A Sbjct: 525 LLSEYLQLISLQTDSDNLTDNTISLMTIHNAKGLEKKVVFIVGLNEGIFPTTQAI----- 579 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI-GRSIQDNSERFPSVLVQELIDYI 755 + + +++R A+ +++ L+ISY G S +ERF S ++EL + Sbjct: 580 ------KMGTEQLEEERRALYVAITRSEELLFISYADGYSYITGNERFESRFIKELDNDF 633 Query: 756 GQ 757 + Sbjct: 634 YE 635 >UniRef50_D1YX62 Putative ATP-dependent DNA helicase n=1 Tax=Methanocella paludicola SANAE RepID=D1YX62_METPS Length = 1087 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 94/817 (11%), Positives = 206/817 (25%), Gaps = 121/817 (14%) Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSD 316 L ++ + + + L + VG+ A + G + Sbjct: 266 DALAELYDYVIVDEFQDTNRQQFKLLKILASKCGDITAVGDENQAIYAFRGAYPENI--- 322 Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITF 376 +D DV + + IL +R + + K L + Sbjct: 323 --GEFTIDFKADVKNLTENYRSTNAILRTAHRLIVNNYDDPEETKLLKSALGVEGDKVKL 380 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 +P+ + + + + ++E+D + I V+ S SA R +P Sbjct: 381 IRTSNPKEQARRVIEEIERIVEDD--IDFNRIAVLFRSHSS-----ANAVQSAFESRSIP 433 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 + + P + ++ L + + + +L ++ +T + L Sbjct: 434 FQLISNNGFLKRPEVRTALAYLYVIANLEDPRYGADQMWWKLLHYKYGLTMKDSHIL--- 490 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 A + + Q+VL L Sbjct: 491 ---------------------------------------AKAAKRDTIQNVLLGKLPDAL 511 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD---MLNAFFLPDAETEAAMTLIE 613 + + SLL ++ R+ + + L L + + T L Sbjct: 512 SWDGKKKINSLLAKIEELRK--NKNKSLSNLLLDVYEASGLSRELSHESTRTSRIWMLNL 569 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + ++A D L + + A V + T + + + Sbjct: 570 RYLHDLVAGFEDFYGADLAGFIEYMRMLDELGEDLDAPTLKEAQGVVLMTCHGAKGLEYD 629 Query: 674 VVCLLGMNDGVYP----------------------RQLAPLGFDLMSQKPKRGDRSRRDD 711 V ++ + +P +L R R + Sbjct: 630 YVFIVDLAKDKFPITAGGRAPLLPDELNDRFRDIFEAEWESDKELDEALKARKRELRLKE 689 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV----------------------- 748 +R L A A+++LY+ + ++ ER PS+ + Sbjct: 690 ERRLAYVAYTRAKKELYLCHPQSYGEN--ERSPSMFIAESCFEDNSVHDDIELIQDDEVK 747 Query: 749 -QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 E+ + L ++ + L L N G ++ Sbjct: 748 VGEMAKDGALDKKKDEIKRLVLSTIDSEPQLALYNLLLYQGLCCHNLPSGIPEAARARED 807 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 A + + +L+ + P + L++ R +D E + Sbjct: 808 AALIMKDIGDGTPLGLKFDPEEVVLSHSSLKIYRDCPKKFELARLLRMPSRYDDEEEGE- 866 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 L + L + R AA L + +I + Sbjct: 867 -----GALGFGTFVHEALELAAKNKVKSRQELDDIAAELLKEPGYKDIDVKRAKVIFDTF 921 Query: 928 --ADRVIACRQPGQSMEIDLACNGVQITGWLPQVQP-DGLLRWRPSLLSVAQGM---QLW 981 +R G + +G + +V +G + Sbjct: 922 WARNRTKLGNVVMTEQAFSFELGGFRFSGKIDRVDELNGNGEVEIIDYKTGREPSKEDRE 981 Query: 982 LEHLVYCASGGN-GESRLFLRKDGEWRFPPLAAEQAL 1017 + L+Y + + K L AE+ Sbjct: 982 SQLLLYKLAFEYDPALKAMGYKPMNLTLELLEAEKPR 1018 >UniRef50_A7VXI0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXI0_9CLOT Length = 1125 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 116/1048 (11%), Positives = 257/1048 (24%), Gaps = 173/1048 (16%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGI--AA 58 ML+ + ++ + E ++LV + + + + G A Sbjct: 1 MLQFVEGTSGSGKTDTIRHMLMEKAKTG-EEKLLLLVPEQNSFEN-ERAMLRLMGPKEAG 58 Query: 59 NIDFPLPASFIWDMFVRVLPEI-PKESAFNKQ-SMSWKLMTLLPQLLEREDFTLLRHYLT 116 I + + + + + + MS L + +L+ + + R + Sbjct: 59 RITVTSFTRMVDLVMRQTGGLAGRRLNDSGRSILMSLALSQVKEELVLYQKQSGSRELVE 118 Query: 117 DDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYT 176 K F++ RP+ L L + + A Sbjct: 119 LMLSALKEFKMCG-----------IRPEDLKAAADRLEEGNLRKKIRETGLVMAAYEALV 167 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 Q + +E V + + L+ L Sbjct: 168 SQSYIDPLDDLTRLKNVLEVTPFFK------GYTVMVDAFAGFTAQE---LEVLS----- 213 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 L+ RQ + + + +N LF+ + Sbjct: 214 -----------------------LVLRQAKETVISVCVDQDPAKDNGMGLFSPVKKTV-- 248 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVT-PDNLLHNIQSDILELENRAVAGVNI 355 L + + + P + + Sbjct: 249 ---------------RQLRRITKDYHIPLAPPIRLPHGKRFQNEE-----------LKLL 282 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 E+ + + I + E + + R+ ++ ++ R+I V+ + Sbjct: 283 EQVIYRQERLESGEVPGHIVLYNASDIYEEADFVARRIQKLV-QEEGYRYREITVIARET 341 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 +SY + A A +PY + + P++ +S L S + S+++ LL Sbjct: 342 ESYRGVLDA----ALESYGIPYFMDQPEPLEEKPLMTLVLSALECVQSGYRSDELFRLLK 397 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 + + E + L + + + + + T L Sbjct: 398 TGLTELQ----TEEIAALENYALLWNLSGRRWLEPFTMHPRGFSPEMTEEDQKKLEGLNR 453 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 E+ SG + + LL +LN + LE Sbjct: 454 LRETVMEPLAQFEESL-RSGTGKGIAYGVYQLLERLNAAQNIRRMADELENM-------- 504 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 + + I+ + + + + E I+ Sbjct: 505 -----GEWNLAQEQIRLWDMLMEILDQMALVLKEQHLSPRRWSELFQLVVQSEEIAFIPQ 559 Query: 656 A-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP--------KRGDR 706 V++ R + V L+G +G +PR G +++ Sbjct: 560 GVDEVSVGGADRSRPAAPRAVFLIGAEEGEFPRTPVSAGVFSDAERRLMISMGLPLYDSL 619 Query: 707 SRRD-DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE 765 + ++RYL A +S ++L++SY + R PS LV+E+ + + Sbjct: 620 EKLAVEERYLAYMAAVSPSERLFVSYASSDLSGG-ARSPSSLVREVRKIFPECPVADRSQ 678 Query: 766 ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 D + A + E+ G+A SE Sbjct: 679 EAFSDLLWSPEPAFELAASLWREPSEREETLKRYFGGLPEYQDRLEAVGRAASEEPIAFQ 738 Query: 826 FTL--------PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR 877 V +++++ + F + L R P + + L Sbjct: 739 NPENAQKLFGSNLRVSASQIEKYYLCRFQYFCRYGLGAKERK---------PAVFDALEY 789 Query: 878 YQINQQLLNALVEQDDAERLFRRF----------------------RAAGDLPYGAFGEI 915 + LL ++ E L + Sbjct: 790 GSVMHYLLENMLRAFSGETLASMKKQELLAEIRRLLDSYVETNLGGWEEKSPRFRYLLAR 849 Query: 916 FWETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQITGWLPQVQP 961 +T + L + E+ + + + G + +V Sbjct: 850 LADTAQMLLSHLGKELAQSDFVPADFELSIGKGKELEPLVLEIPGGGQISVEGKIDRVDV 909 Query: 962 DGLL---RWRPSLLSVAQGMQLWLEHLV 986 R + L Sbjct: 910 MEKPSGKYIRVVDYKTGSKDFKLSDVLY 937 >UniRef50_A4IYZ2 ATP-dependent DNA helicase/UvrD/REP helicase n=21 Tax=Francisella RepID=A4IYZ2_FRATW Length = 671 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 70/575 (12%), Positives = 164/575 (28%), Gaps = 78/575 (13%) Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAK--------LLTRQRRHSFED 271 P L+ A L + + I P L + + R ++ Sbjct: 156 PKDELEEQAAFIYQEYQKYLKSYNSFDFDDLIFQPIQLFRNHSNIQKLWADKFRYILIDE 215 Query: 272 RELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVT 330 + + L VG+ + + G + L + Sbjct: 216 YQDTNESQYQLLKYLTLGKNKFTVVGDDDQSIYAWRG----------SRPENLRHLQEDF 265 Query: 331 PDNLLHNIQSDILEL---ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVE 387 D + ++ + N A + I + + E + Sbjct: 266 ADLKVIKLEQNYRSTGRILNVANKLIENNSHIFDKKLWSNKDYGEQIKVISLINDEDEAQ 325 Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 + + + + D V++ + + +PY IS + S Sbjct: 326 FIASDIFFDRVKTKS-KNSDYAVLIRSN-----YQAYLLERYMQMHKIPYTISGGSSFFS 379 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID 507 ++ IS L L + L +++ P + ++ + L ++ ++ + Sbjct: 380 KAEIKDIISYLRLIVNPDDDRAFLRVINTP----KREVGSATVHKLGEYASQHHCSF--- 432 Query: 508 DDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567 HT L + + +L + + L Sbjct: 433 -------------FHTLYSLENFELRDFTKRNLISFKDLILNTQQQINTSIS----VQEL 475 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 +N + ++ R L + + E I + + I+ + Sbjct: 476 KNIINSFIDNIS-----------YRQWLIDSSSSEKQAEFRYANIIEVTKWIVNQLEDES 524 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 Y L+ + +++ +R ++ V I T+ + + FK V ++GM +G+ P Sbjct: 525 YNGLESLATVLNKMLLIDILDRDNEDKNDNQVQIITMHASKGLEFKKVYIMGMEEGILPH 584 Query: 688 QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPS 745 Q + +D+R L A+ A++ L I+ + ++ PS Sbjct: 585 QQSIED-------------DSIEDERRLAYVAITRARENLTITMTKHRKKFGEKQVSVPS 631 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 + EL + + A ++ + + L Sbjct: 632 RFIDELPETDLYWVGTEKECAETRKQNSKQNISAL 666 >UniRef50_C1SJ11 DNA/RNA helicase, superfamily I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ11_9BACT Length = 703 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 64/615 (10%), Positives = 158/615 (25%), Gaps = 112/615 (18%) Query: 165 QAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYL 224 L + + + G + + + +++ P + ++ IS Sbjct: 93 LRLLRRDPEKAGLEPGFGILDQDDRLATIRDIIKNLNIDHKKYPPKKYMNTIS--TYKNT 150 Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLL--------------------TRQ 264 + K E+ +F + Y +KD + Sbjct: 151 RPYVDGKKPEELLHMFADVFAAYQQRLKDQKLVDFDDMLALTIRMFKNHPDTVGYYKELF 210 Query: 265 RRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQEL 323 R ++ + L D VG+ + +G G D +L Sbjct: 211 RYILVDEYQDTNDIQFLFLHLLAGLDGNLCVVGDDDQSIYGWRGADIRNILE-------- 262 Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCH 380 F + + + + A + + + + Sbjct: 263 --FDTIFKGTKIIRLLENYRSRPQILQAANKLIRNNKLRKGKDLVAARDEGGLVQVLPVS 320 Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 E E + D++ L + + +I ++ F + + Y + Sbjct: 321 RETDEAEFVIDQVNKYL--EEGVKGSEIAILYRTNGQSRN-----FEVLLNRQGVAYKVI 373 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 ++ +S L L D+ + S + P I + + + Sbjct: 374 GSVGFYQRREIKDILSYLRLFDNPYDSVSFRRSVKAPP----RGIGDTTINKITD----- 424 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY-DESSGLIAE 559 YA + ++V D+ G E Sbjct: 425 ----------------------------------YASGNGISILEAVYAMNDQLRGAQKE 450 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 + +L + + + + + ++ E E + + Sbjct: 451 SFRGYLKIFNELAACLKVSEMVKTVMDMTDY------SGYVKRYEDEQEAERRISNIEEL 504 Query: 620 IAEGLGAQ-YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + + ++ S V + T+ + + F+ V L Sbjct: 505 YNAAVSFENSNSDAMITDFL----AATAIATSSDEPADSCVQLMTIHSAKGLEFESVFLT 560 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 G+ +G++P + D + ++ R L + A+Q L+++Y + Sbjct: 561 GLENGLFPLHGSLEEPDELEEE------------RRLCYVGVTRAKQNLHMTYASTRMVY 608 Query: 739 NS--ERFPSVLVQEL 751 + SV + E+ Sbjct: 609 GKYMPQSRSVFLDEM 623 >UniRef50_A9NHW3 DNA helicase II n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NHW3_ACHLI Length = 703 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 69/664 (10%), Positives = 194/664 (29%), Gaps = 103/664 (15%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQA------------------PL 168 L+++ A L ++ V LA T + E A L Sbjct: 39 LTTRIAYLIEELGVAPDSILAVTFTNKAAREMKERIVEMAGPYATNTWIYTFHAFGVKVL 98 Query: 169 WKALVEYTHQLG-----QPRWHRANLYQRFIE--TLESATTCPPGLPSRVFICGISAL-- 219 + + + ++ I+ L++ + + ++ + + Sbjct: 99 RRDIEHLKMGYTVNFNIIDEDDAKAMVRKIIKDLNLDTKSYKANAIRHKISLFKHLNIDY 158 Query: 220 --PPVYLQALQAL-GKHIEIHLLFTNPCRYYWGDIKDPAY--LAKLLTRQRRHSFEDREL 274 L+ + I +LL + + + D L + ++ + Sbjct: 159 FDNANERLVLEKYTHELITNNLLDFDDLQILTYKLFDEHQHILEYYQNKFNFILVDEFQD 218 Query: 275 PLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDN 333 + L VG+P + + G +Y L + D + Sbjct: 219 TDHLQYKMMKLLAGKQKNLFVVGDPDQSIYAFRGANYDNAKFFLNDFKNEDGSKAEIVLD 278 Query: 334 LLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL 393 L + +IL+ N+ + S + S E +++ + + Sbjct: 279 LNYRSTKEILKFANKLITSNK--NRPFSKSLETDLGNGLKPFIWSAQSDLNEAQMIANEI 336 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 ++++ DI ++ + + F +PY + + ++ Sbjct: 337 ETLIKDG-GYKYSDIAILYRNNA-----LSRSFEDVFMKYNIPYVLYGGISFYQRKEIKD 390 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 ++ + L + ++ +++ P R I L L+ + E + Sbjct: 391 ILAYIRLVVDPNLDFYLMRIINTP----RRAIGPTTLNKLQSYAKEHNM----------- 435 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 + ++ +S + + L + Sbjct: 436 ----------------------------SMFDAI----DSFDISGKTKQSLLEFKTLILE 463 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ-YGDAV 632 + L + + + + + + + + + + A+ Y + Sbjct: 464 MKFDFQNFTELGKVVDYVAYKTGYNQMLETDKDEYSEERIEYIKELKNPFVQAEAYYEGT 523 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L L L Q + + ++ V + T ++ + FKVV + M + ++P + + Sbjct: 524 FLEKLMQLLDQIALYSDLDRNKVSDAVVLSTFHQVKGLEFKVVFMTVMEEQIFPSSQSFM 583 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQE 750 + +++R + + A+++LY++ + + + PS ++E Sbjct: 584 DLN------------ELEEERRIAYVGVTRAKERLYLTRSEKRLLYGALIYPRPSRFLKE 631 Query: 751 LIDY 754 ++ Sbjct: 632 MMPE 635 >UniRef50_D2NR24 Superfamily I DNA and RNA helicase n=17 Tax=Bacteria RepID=D2NR24_9MICC Length = 985 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 62/556 (11%), Positives = 131/556 (23%), Gaps = 124/556 (22%) Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF---------------- 287 + I +L K + L + ++ Sbjct: 322 SLDFDDLIGRTVFLLKKFPEIANYYRRKFRHILVDEYQDTNHAQYQLVRELVGAHVKAPA 381 Query: 288 ---------NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNI 338 VG+ + + G D + F P+ + Sbjct: 382 DRGPYPDAVPPAELTVVGDSDQSIYAFRGADIRN----------ITDFEKDYPNAHTILL 431 Query: 339 QSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA 395 + + +N A + R + I +V S E + + Sbjct: 432 EQNYRSTQNILSAANAVIERNPDRRPKKLWTASGAGAKIIGYVAESEHAEARFITREIDR 491 Query: 396 MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 + ++ + P D+ + LPY + ++ + Sbjct: 492 L-ADEHGVQPGDVAIFYRTNAQ-----SRTLEDMLMRAGLPYRVVGGTRFYERKEIKDAL 545 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 + L + +V +L+ P Sbjct: 546 AYLRALSNPDDDVNVRRILNEP-------------------------------------- 567 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 + ++ YA + + + GL A V A + ++ Sbjct: 568 -----KRGIGAKSESVVADYATAHRISFFAAARQAADVPGLGAAAVKKYAEFVRLMDDLA 622 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ-YGDAVPL 634 + P L + A + + ++ + + L Sbjct: 623 QIART-EPAATCLEAVLEQTGYLAALRASKDIQDESRVENLSELLDAMVEFETENPGADL 681 Query: 635 SLLRDELAQRLDQERISQRFLA---------------------GPVNICTLMPMRSIPFK 673 + +A D + I R + G V + TL + + F Sbjct: 682 EQFLEHVALVADADSIPNRPASAEGESASAAQIAAEAAEAKAQGMVTLMTLHTAKGLEFP 741 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 VV L GM G++P + D ++R L L A ++LY++ Sbjct: 742 VVFLTGMEHGLFPH------------QRALTDEKEMSEERRLAYVGLTRAMERLYLTRSE 789 Query: 734 RSIQDNSER--FPSVL 747 + PS Sbjct: 790 TRTMWGKSQFNPPSPF 805 >UniRef50_D0RN21 ATP-dependent DNA helicase PcrA n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN21_9RICK Length = 742 Score = 215 bits (546), Expect = 9e-54, Method: Composition-based stats. Identities = 59/520 (11%), Positives = 145/520 (27%), Gaps = 91/520 (17%) Query: 260 LLTRQRRHSFEDRELPLFRD-SENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLE 318 + ++ + + VG+ + + G + +L Sbjct: 210 YQRNFKYILVDEFQDTNYVQNFWLQLLTSEKKNICVVGDDDQSIYSWRGAEVKNILE--- 266 Query: 319 SSQELDAFVDVTPDNLLHNIQSDILELENRAVAG---VNIEEFSRSDNKRPLDPLDSSIT 375 F + + ++ + EN + ++ E N + Sbjct: 267 -------FKNNYQNTQTIKLEQNYRSTENILNSATSLISNNEDRLEKNIWSELGDGEKVK 319 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 E + D + L +I ++V + F F L Sbjct: 320 IKSYFDGISEATGVSDIIEQNLS--KKFKLNEISILVR-----AAFQTREFEERFIKIGL 372 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY I ++ + L L + +++ P + I + ++ + Sbjct: 373 PYRIIGGLKFYERSEIKDALGYLRLINQSSDDISFERIINNP----KRSIGDSSIKKIHD 428 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 +A E + + + + Sbjct: 429 ---------------------------------------FAREKDLSLFDASKEILKENI 449 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 L + + +L S L+ + W++ + L + D + E + Sbjct: 450 LKPKTIQNLKSFLVNMISWKQKCKDIDHIS-LLEIVLDESGYSSMLKNERTPEADARLEN 508 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 + + + L+ + ++ Q I + + +NI T+ + + F V Sbjct: 509 LKELKSSMKNYSS-----LNEFLENISL---QTAIDEEWDGEKINIMTIHSAKGLEFDAV 560 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 L G +G++P Q + ++G +++R L A+ A+++L+IS+ + Sbjct: 561 FLPGWEEGLFPHQKSID---------EKGA-DGIEEERRLAYVAITRAKKELFISFANQR 610 Query: 736 IQDNSER--------FPSVLVQELIDYIGQSHYLPGDEAL 767 + S + E+ D + E Sbjct: 611 KFYGRQNDNYDFYSSLQSRFIDEIDDKYTKISIDDSTEDE 650 >UniRef50_C8WBZ1 UvrD/REP helicase n=7 Tax=Alphaproteobacteria RepID=C8WBZ1_ZYMMN Length = 768 Score = 215 bits (546), Expect = 9e-54, Method: Composition-based stats. Identities = 76/685 (11%), Positives = 176/685 (25%), Gaps = 95/685 (13%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLP---SRVFICGI- 216 Q L K L++ + A I+ ++ P + F G Sbjct: 129 DTDDQIRLLKQLIQGQGIDEKQW--PAKQLAGIIDRWKNRGLTPDKIAGKEEDSFADGQG 186 Query: 217 SALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL 276 +AL Y + L +L LL + L R R ++ + Sbjct: 187 AALYLAYQKRLLSLNACDFGDLLLH----MLVILTQHREVLDSYHDRFRYIMVDEYQDTN 242 Query: 277 FRDS-ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLL 335 + VG+ + + G + +L F + P + Sbjct: 243 QAQYLWLRLLAQKNRNICCVGDDDQSIYSWRGAEVANILR----------FEEDFPGAKI 292 Query: 336 HNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR 392 ++ + A + + E L Sbjct: 293 IRLEHNYRSTPQILGAASGLITHNNARLGKTLWTERDQGEKVKIIGVWDGAEEARQLVAD 352 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 + + + + + +++ + F F + LPY I + Sbjct: 353 VQNLRRAN--IPLNKMAILIR-----AQFQSREFEDIFIAKNLPYRIIGGFRFYERAEIR 405 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 ++ L + +++VP + I ++ + L Q Sbjct: 406 DALAYLRVIAQPTDDLAFERIVNVP----KRGIGKKAMEKLYQ----------------- 444 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 A ++ L +++ L L+ + Sbjct: 445 ----------------------AAFLDRIPLAEAAEKLVSEKTLGSKITQSLGQLMNDFS 482 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 WR+ L+ + + + L + + + + Sbjct: 483 EWRKSLSVVSHADVTRKMLDESGYKAMLRAVNDVQSAGRL-ENLTELARAMEEYD----- 536 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L + ++ +D E + + + T+ + + F V L G +GV+P Q + Sbjct: 537 DLGSFLEHVSLVMDHEN---DPIDDKITLMTMHAAKGLEFDHVFLPGWEEGVFPSQRSLD 593 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQE 750 G + +++R L + A++ I + PS + E Sbjct: 594 ----------EGGLNSLEEERRLAYVGITRAKKCCTIFHAANRRVYGQWIASTPSRFISE 643 Query: 751 LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 L D + L +A + A ++ ++ +Q R+ + A Sbjct: 644 LPDDHIEEKSLLRKKAPIWRDIWAEDRSKNPAYNSAKEAITPPWQLASRRGAGWQRAQKA 703 Query: 811 SQAGKAHSEFVQPLPFTLPETVPLE 835 + + + + Sbjct: 704 AASPSPAVSHPLKKKDSPQYKIGDT 728 >UniRef50_A5EWK9 DNA helicase II n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EWK9_DICNV Length = 712 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 69/627 (11%), Positives = 163/627 (25%), Gaps = 94/627 (14%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 Q L K L++ + + +A Q I + LP ++ P Sbjct: 115 DSDDQLRLIKRLLQKNNWNEEILSAKAVQAQ--INAYKENGLRAADLP--------TSAP 164 Query: 221 PVYLQALQALGKHIEIHL------LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDREL 274 P+ + ++ I + + R + ++ + Sbjct: 165 PLEIAVHHFYQEYEHITRQQGTMDFAELLLLTTELLAQHETVQQRFHQRFQAILIDEFQD 224 Query: 275 PLFRDSENAGQL-FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDN 333 + QL VG+ + +G G + P Sbjct: 225 TNTLQFKLVTQLCAPETQLFVVGDDDQSIYGWRGAQI----------DHIVHLERYYPTV 274 Query: 334 LLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLH 390 ++ + + A A + + +I + + E L Sbjct: 275 HTIRLEQNYRSTKTILAAANAVIAHNQTRLGKTLWSDGKHGEAIALYAAVNEYDEARYLV 334 Query: 391 DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 + + + ++ + ++ A + +PY I Sbjct: 335 ENIAQFHQ--HGGAYDQCAILYRSNA-----LSRIYEEALIQKNIPYRIYGGLRFFERAE 387 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 ++ ++ L L + +++ P T E +R L Q V S R DD Sbjct: 388 IKDALAYLRLLHYPDDDAALERIINQPPRGIGA-KTMEDVRLLAQRVQCSLWRVITDDAL 446 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 + + A L Sbjct: 447 LEQ-----------------------------------------KCSARAQNALRQFRAL 465 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 + + L + L + D + + + +IA G + Sbjct: 466 IIKMTAFAERSDSLRDILKMVVDESGLYAALTNNNQEETENRRENLHELIAAGDYQSDQN 525 Query: 631 AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 + D L + + A V + TL + + F V ++ + +G++P + Sbjct: 526 DADHDKIADFL-AMASLDAGDKETNAHGVQLMTLHSAKGLEFNRVYMVALEEGLFPNARS 584 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLV 748 + ++ +++R L + A+++L +S+ R + PS + Sbjct: 585 ------------LENSAQLEEERRLAYVGITRAREQLTMSFAERRRYYGQDNYARPSRFL 632 Query: 749 QELIDYIGQSHYLPGDEALNCDESEAR 775 E+ + ++ + Sbjct: 633 NEIPPELLNMVRPVLFNRTQPNDIQED 659 >UniRef50_A5GQG6 UvrD/REP helicase n=18 Tax=Cyanobacteria RepID=A5GQG6_SYNR3 Length = 784 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 80/572 (13%), Positives = 160/572 (27%), Gaps = 92/572 (16%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF------------NSDGEQDVGNPLL 300 + + R R ++ + + L N VG+ Sbjct: 237 NEQVRSYWHRRFRHVLVDEYQDTNRTQYDLIKLLVTGGQDPQLYNEWNGRSVFVVGDADQ 296 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 + + D+ +L + A D T + ++ + A + + Sbjct: 297 SIYSFRAADF-TILMGFQQDFGDQAADDATRT--MVKLEENYRSTATILEAANALIANNS 353 Query: 361 S---DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 RP I+ C E E + R+ + P L+ + V+ Sbjct: 354 ERIDKVLRPTRGEGELISLTRCDDEIAEAEAVVHRMRMLDAAHPELSWGSMAVLYRTNAQ 413 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 + +PY + ++ ++ L L + S +L +++VP Sbjct: 414 -----SRAIEESLVRWRIPYVVVGGLRFYDRREIKDVLAYLRLLINPADSVSLLRVINVP 468 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 R I + ++ L N+ I Sbjct: 469 ----RRGIGKTTIQRLNDAANQLAIPLW-------------------------------- 492 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 G A+ + L+ L + +++ L + Sbjct: 493 ----DVVSDGEAVRSLGGRSAKGLLQFCELINGLREQAQVAPPSELIQQVLEKSGYLREL 548 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 E E +++ A + + GD + L + S+ A Sbjct: 549 ITEATDEAEERRRNLQELVNAALQYQEENEEGDLEGFLA-----SAALASDADSKDTAAD 603 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V + TL + + F VVCL+G+ G++P D + +++R L Sbjct: 604 RVTLMTLHSSKGLEFPVVCLVGLEQGLFPS------------YRSLDDPASLEEERRLCY 651 Query: 718 EALISAQQKLYISYIGRSIQDN---SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 + A+++L++S+ PS+ + EL + + Q + S Sbjct: 652 VGITRAKERLFLSHASERRLWGGMREPAVPSIFLAELPEALVQG---------DIPRSGG 702 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGERQSYAREW 806 L D QP R S AR W Sbjct: 703 AALRREQRLERLTRVDRAEAQPKARVSAARSW 734 >UniRef50_Q256I8 DNA/RNA helicase n=17 Tax=Chlamydiales RepID=Q256I8_CHLFF Length = 636 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 69/592 (11%), Positives = 172/592 (29%), Gaps = 85/592 (14%) Query: 171 ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL 230 L++ Q + ++ Q I ++ P L ++ + ++ Y Q L+ Sbjct: 118 KLLKQCLQKFNLKKTLSSSIQYHISQAKNRLLYPEDLDPEEYVDPVVSIYKEYQQRLKET 177 Query: 231 GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 LLF + D P + + ++ + A + Sbjct: 178 NALDFDDLLFLTV--KLFKDF--PEVKKEYSELWKALLIDEYQDTNHAQYMMAQTIAGKH 233 Query: 291 G-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA 349 VG+P + + G + +L+ F P + ++ + N Sbjct: 234 QNIFAVGDPDQSIYSWRGANIHNILN----------FEQDYPQARVLRLEENYRSYGNIL 283 Query: 350 VAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 A + + N R + I + + + E E + + + + + R Sbjct: 284 NAANALIQNNASRLKKNLRSVKGPGEKIRVFLGKTDKDEAEFVASEIYRLHKR-SNIPLR 342 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 D + F F A R +PY I + ++ ++ L + ++ Sbjct: 343 DFCIFYRTN-----FQSRTFEDALLRRRIPYEILGGLSFYKRKEIQDILAFLRMFTAKCD 397 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 +++P + + + L + + R Sbjct: 398 VVAFDRTVNLP----KRGLGPSAISSLIDYALTNN----------------LPILEACRN 437 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 L + + + +G W + + + + +++ + + L Sbjct: 438 ALETHSVKLSKKQQEGLWSYLSIFQQLERAYTLPLNEFVIATIRITGYLQVLK------- 490 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE-GLGAQYGDAVPLSLLRDELAQRL 645 E + + ++ Q L D+LA + Sbjct: 491 -----------------EDPDTFEDRKSNLDELASKTFEWEQQNTEGTLESFLDDLALKS 533 Query: 646 DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 + A VN+ T+ + + F++ ++G+ + ++P + +G+ Sbjct: 534 STDETELI--ADRVNLMTIHNGKGLEFRIAFVVGLEENLFPHANS------------KGN 579 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYI 755 +++R L + AQ LY++ PS ++E+ Sbjct: 580 YENLEEERRLCYVGITRAQDLLYLTAAQTRFLWGTVRVMKPSRFLKEIPRDY 631 >UniRef50_B0VGK7 Superfamily I DNA and RNA helicases n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VGK7_9BACT Length = 732 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 63/517 (12%), Positives = 150/517 (29%), Gaps = 87/517 (16%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRD 309 + + K + + ++ + E Q+ VG+ A + G Sbjct: 211 LNNNTVREKYRAQFQYVMIDEYQDTNKAQFEIVHQIAGGHQRVCVVGDDDQAIYSFRGAS 270 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRP 366 +L F ++ + N A A + S Sbjct: 271 LRNILE----------FEKDYNSVHSIRLEQNYRSTGNILALANAVIANNRRRHSKELWS 320 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 P+ V + E + D +L + + + R+I V+ VF Sbjct: 321 ELPVGDKPVLAVYENEIEEANRITDAILKL--QRKGIPLREIAVLYRTNAQ-----SRVF 373 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 SA +PY+I ++ ++ L + + +E +L +++ P I Sbjct: 374 ESALIQAEIPYSIVGGVQFYQRKEIKDLLAYLYVLSNLNDNESLLRIINEPA----RGIG 429 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + + L G+A ++ + + Sbjct: 430 QTSINRLI---------------------------------------GFANKTRISLFSA 450 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRR------GLAQERPLEEWLPVCRDMLNAFFL 600 + + L ++ + L W++ L + + E L + N+ Sbjct: 451 IQNVEAIEELGNPAKKRISEFCLMLERWQQSVSRKPALEMVKTIVEELELISHYQNSNDP 510 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 D + + + ++ +A + D + + + Sbjct: 511 QDIARAENLVEFVTSVSEFSEHFYQENEREPL-IADYLPYVALQTDLD--RVKENMDSIR 567 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + TL + + F+ V + G+ D + P ++ + +++R LF + Sbjct: 568 LMTLHNAKGLEFEAVFIAGLEDELLPHRMCMNN------------QDSIEEERRLFYVGI 615 Query: 721 ISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYI 755 A+ L++SY ++ PS + E+ + Sbjct: 616 TRAKNYLHLSYTKSRRLYDTFYFPVPSQFLTEVDSRL 652 >UniRef50_D0LEA1 UvrD/REP helicase n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LEA1_GORB4 Length = 1119 Score = 214 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 133/1016 (13%), Positives = 251/1016 (24%), Gaps = 137/1016 (13%) Query: 120 DKRKLFQLS-SKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKA---LVEY 175 + +L+QL+ S A+ D+ + L + E L +A L E Sbjct: 141 SETELWQLAFSLVANWPDELHTTKVPASVTEAVLKLYGEMAEHLVDIDDLARAGSDLYEM 200 Query: 176 THQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIE 235 L + R Q ++ + +P + AL + Sbjct: 201 IPTLPKGPKQRGGPNQALLKIRDVIDERRELIP--------------MVTALAEAMREQS 246 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN------S 289 + + +P +A R ++ + LF Sbjct: 247 ALDFGSQMSLAARLVVGNPEVVAAERKAFRAVLLDEYQDTGHSQRVLLSTLFGGTSRDAP 306 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD-ILELENR 348 VG+P+ + +G G L D + L ++ +L L N Sbjct: 307 VAVTAVGDPIQSIYGWRGASAANLPRFAGDFPAADGSPADRRELLTSWRNAEVVLRLANH 366 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML--EEDPTLTPR 406 A + S + D S + + E E + D + E+ P Sbjct: 367 VSAELRRRGIPVSVLRARPDAPSGSAHIALTETVVDEREWIADAIETRWRAAENDGQAPP 426 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 ++V + +P + R +P + P + +S L L Sbjct: 427 TTAILVRRNEDSAP-----LAAELERRGIPAEVVGIGGLLHVPEVTDVVSTLRLMADPMA 481 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 + L + AR+ + L L + E + + + T + Sbjct: 482 GTAAMRL----LTGARWRLGAADLAALWRRAAE------LAAEEIAAAGGAVTSREQLDA 531 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 L +L + G +V+ + S + + + QL RR + +PL E Sbjct: 532 ALDAVLPTEVV-DRAGIADAVVDPGDPSRYSPDGYARIRAFGAQLESLRRRIG--QPLPE 588 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLI--EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 + + + I + A L L L Sbjct: 589 LVADVENTIGVGVEAQIRARRMRGAITGREHLDAFAEYVTRYADRRGADLPGLLAFLETA 648 Query: 645 LD----QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF------ 694 E V I T+ + + + VV + + ++P A + Sbjct: 649 ETIEKGLEPGRIEVAEQRVQILTVHAAKGLEWDVVAIPHLCHNIFPGGKAETTWLGSARE 708 Query: 695 --------------------------------------DLMSQKPKRGDRSRRDDDRYLF 716 D ++ + R ++DR L Sbjct: 709 LPGELRGDLAIAAEQGSAHPEGYPVLDLHAVTDRKELEDTIATYKEAIADRRLEEDRRLL 768 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA--------LN 768 AL A+ L IS S + R S EL+ I + P E+ Sbjct: 769 YVALTRARHDLLISAHHWSESGDKPRGGSEFFTELLTAISDAVDDPTVESGGLVVDVLAP 828 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 + A L P DP + ++ A L + P + Sbjct: 829 EPDDGAPNPLAERVLAAPWPADPLAGRRDGVRAAADLVLAEIAARDAPALFDTDGAPESD 888 Query: 829 PETVPLETLQRFWAHPVRAFFQM----------------------RLQVNFRTEDSEIPD 866 + + + + A + L + + Sbjct: 889 GDPDLSDEIAAWEAEVSALLVEREASNQALVEVELPTHLSVSQLVELDADEAEFARRLRR 948 Query: 867 TEPFILEG-LSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 PF R + RL G A + + Sbjct: 949 PTPFRPNPTARRGTAFHAWVERWFGAT---RLLDIDELPGAADATATPDADLDALRDAF- 1004 Query: 926 QLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVA------QGMQ 979 LA + + G+ + G + V D W + Sbjct: 1005 -LASPWANRSPSEVEVPFETVIAGIVVRGRIDAVFADPDGGWTVIDWKTGVVPEPARRES 1063 Query: 980 LWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPL 1035 L+++ Y + R + + A L + AP Sbjct: 1064 LFIQLAAYRIAWAQLAGVPVDRVRAAFHYVRSGHTLAADELPDESVLAAKLARAPQ 1119 >UniRef50_B2UQR8 UvrD/REP helicase n=2 Tax=Verrucomicrobiaceae RepID=B2UQR8_AKKM8 Length = 668 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 70/607 (11%), Positives = 166/607 (27%), Gaps = 87/607 (14%) Query: 163 AWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPV 222 + Q+ L + L+ + + + L + ++++ + + + + Sbjct: 117 SEQSGLIRRLIVRHGGITEKITPKDVLSS--MSRMKNSGLGLDSIEDNLT----ANIAAS 170 Query: 223 YLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSEN 282 Y + LQA LL + +D R R + ++ + Sbjct: 171 YQRELQAQNSVDFDDLLIL--ADKLLKEHRD--VREAWQQRFRYITVDEFQDTNSLQMSL 226 Query: 283 AGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD 341 G L VG+ + +G G +L F P+ + ++ + Sbjct: 227 LGHLVGPEHNVCVVGDDDQSIYGWRGAQISNILE----------FERFFPNPSVIKLEEN 276 Query: 342 ILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 A A + R R ++ E E + + + Sbjct: 277 YRCTAPILDTANALIRHNLGRRDKTLRAHKGGGEAVRLISMPGDAEEAEFIITDI-ENVR 335 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 D ++ + + +PY + ++ ++ IS L Sbjct: 336 RQEGRPWEDFAILFRANTQ-----SRIIEQTLREHKIPYRMVGAQSFFDRKEVKDLISYL 390 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + ++ E +L +L+ P I+E + W E G + L + Sbjct: 391 ATIENPQADEYLLRILNTPP----RGISELTSHLVIDWSREHGNSVWAALQDEEFLAALS 446 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 T ++ Y L Sbjct: 447 TRARNSVQAFNELIAKYIDLFQD---------------------KETDFGDILEQLIEET 485 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 + + +AE + + I ++ L Sbjct: 486 G-----------FSEYVTRLCKTEAEIQKRLVSIGDVKASLRNFWQ-----PGKTLRDYL 529 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 ++ ++ V + T+ + + F VV L+G+ +G+ P + + + Sbjct: 530 AQV-TLDKEDNDDDVENKPGVCLITMHAAKGLEFPVVYLVGLEEGILPHKRSLEDGNC-- 586 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIG 756 D++R L + AQ+KL ++Y ++ S + E+ ++ Sbjct: 587 -----------DEERRLLYVGITRAQEKLMLTYCATRLRYGDRMPCQRSSFLSEIPPHLM 635 Query: 757 QSHYLPG 763 + + Sbjct: 636 EYYKWED 642 >UniRef50_D1KF50 SRS2 n=6 Tax=rosids RepID=D1KF50_ARATH Length = 1147 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 84/689 (12%), Positives = 205/689 (29%), Gaps = 92/689 (13%) Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESS 320 + ++ + + L + + VG+ + +G G D Sbjct: 474 QDTWKAIIVDEFQDTSTMQYKLLRMLGSHNHITIVGDDDQSIFGFNGADSSGF------- 526 Query: 321 QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS----RSDNKRPLDPLDSSITF 376 D+F P+ + + + A +I + + +S + + S IT Sbjct: 527 ---DSFRRDFPNYKEVRLIKNYRSSRHIVEAASSIIKNNTKRCQSKSISSENSQGSKITV 583 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPT--LTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 CH+ + + + D+++ + + T + DI ++ VF +A R Sbjct: 584 KECHNEEAQCAYVIDKIIEITNDGSTPCCSHGDIAILYR-----RQVSGKVFQNAFRQRK 638 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P+ + A V++ +++L S + +L + + + ++ Sbjct: 639 IPFNVH-GVAFYRKKVVQVILAMLKTTFSECDDASYRRVFKA-LLPFEKEEKKRIIEHIE 696 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + + ++ ++ T + + ++L V + Sbjct: 697 KISTSRKCSFISAASDIFNAKISGTFKRSQLTQGRKVLQT---------LDMVAKLVDRE 747 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 ++ +V +A+++ ++ L E V + D + + + + Sbjct: 748 QSLSAVVTCVANMI-----------PQKYLLEQRAVVDNDGGKLLNEDNDLRSVLQYLMD 796 Query: 615 QWQAII--------AEGLGAQYGDAVPLSLLRDELAQR-LDQERISQRFLAGPVNICTLM 665 I E + L + +++R + R +R V + T+ Sbjct: 797 DVAEFISTHCTTTEEEDAIKEKKGCNQLHSFINYISERETENFRSRRRDNENSVTLTTIH 856 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + + +V ++ N+ P G S + +++R L A+ A++ Sbjct: 857 QSKGLEWDIVFIVKANENEIPLLHESNGNASESG-------TSLEEERRLLYVAMTRARK 909 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQ-----------SHYLPGDEALNCDESEA 774 KL+ Y+ PS ++E+ ++ Q LP + Sbjct: 910 KLFFLYVTVDSNW-QVLQPSRFLKEIPGHLLQGDMSVNDCRKVHENLPNKTEQSVSSFGT 968 Query: 775 RVKAHLT--CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV 832 +K + + M +YA + V L + Sbjct: 969 DIKHEESKLTDNDVMNIPEDYASEESIAAYALNGNNFLKRFDVEVRSVVSHLFHNWAKKQ 1028 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD 892 + +R VR RL + + + L + + + Sbjct: 1029 AFQEPKRLI-DKVRFVIGERLAIKKNKHKDVL------------------RALKSSLTSE 1069 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQC 921 +A + LP I E Q Sbjct: 1070 EAFQYAEHVLRWEQLPADTRAHIVREKQE 1098 >UniRef50_Q6MND7 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MND7_BDEBA Length = 672 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 68/584 (11%), Positives = 171/584 (29%), Gaps = 99/584 (16%) Query: 214 CGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIK--------------DPAYLAK 259 + + P +A + +E+ + G + +P L K Sbjct: 146 DRRTGMAPQT-EAFDEYHEMVEVLTPKFTKRLEHLGVVDFEGLLIKPITLFKENPEILEK 204 Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLE 318 + + ++ + + Q+ S VG+ + +G G + +L+ Sbjct: 205 VQGMFTQVMVDEFQDTNRLQMDLIAQIVKSHNNIAVVGDDDQSIYGWRGAEVKNILN--- 261 Query: 319 SSQELDAFVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSS-- 373 F + ++ + A A ++ + RP D+ Sbjct: 262 -------FPQEFTPCEVIKLERNYRSSAEILAVANAAISKNKNRHGKILRPQVAEDTGQL 314 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + + E E + +L + + +D+ V+ + S+ Sbjct: 315 PELFILDREEDECEFVVTEILNFQRQ--GYSYKDMAVLYRSNTQGG-----LIESSLRRA 367 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY IS + ++ ++ L + + +++VP I + + L Sbjct: 368 NVPYHISGGTSIFDRREIKDLMAYLKQALAP-NEVSLRRIINVP----SRGIGDTSIEKL 422 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 ++ + I + W+ + G A++ Sbjct: 423 SEFALKKRINF-------------VDACRFWQEAGVQDKAGAAIDD-------------- 455 Query: 554 SGLIAELVGHLASLLMQL-NIWRRGLAQERPLEEWLPVCRDM-LNAFFLPDAETEAAMTL 611 L + L P + + + +D+ + A + Sbjct: 456 ----------LMMFIENLPKNILDFQVGSSPGAKMVQIFQDIGYREYVYGTAADPTSAEK 505 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + + + + ++ + L ++ +S+ L V + TL + + Sbjct: 506 KWMVVEILGRILDSFLGRRSYDVENIKSFVDCMLLRDDLSEEELENKVQLMTLHASKGLE 565 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F VV L G+ + + P + D ++R LF + A+++L +S Sbjct: 566 FPVVILAGLEEDLLPHKNLGSDID---------------EERRLFYVGVTRAKKRLVMSR 610 Query: 732 IGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 + ++ PS + EL + L + + + Sbjct: 611 CQQRKKNGAVRPVAPSRFLLELPKELYTEFPLGARPVVGQERED 654 >UniRef50_C8S459 UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S459_9RHOB Length = 850 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 80/692 (11%), Positives = 176/692 (25%), Gaps = 74/692 (10%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLP---SRVFICGIS 217 Q L K L+ + + A L I++ ++ P +P + + + Sbjct: 137 DTDDQIRLLKQLIVAENIDEKRW--PARLLAGLIDSWKNRAWTPAKVPSSEASAYNNRGT 194 Query: 218 ALPPVYLQALQAL--GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELP 275 L +Y L+AL ++ L + + P LA+ R ++ + Sbjct: 195 ELYQMYQDRLRALNATDFGDLLLHVVTIFQTH------PDVLAQYQRWFRYILVDEYQDT 248 Query: 276 LFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL 334 L + VG+ + +G G + +L F P Sbjct: 249 NVAQYLWLRLLAQAHRNICCVGDDDQSIYGWRGAEVGNILR----------FEKDFPGAH 298 Query: 335 LHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHD 391 + ++ + + A + + + + E + D Sbjct: 299 VVRLEQNYRSTPHILAAASAVIAANKGRLGKTLWTEREAGEKVRLIGHWDGEEEARWIGD 358 Query: 392 RLLAMLEEDPTLTP---RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 L A+ + P D+ ++V + F LPY + Sbjct: 359 ELEALQRGTRAMDPHSLDDMAILVR-----ASHQMRAFEDRFLTIGLPYRVIGGPRFYER 413 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPV----------LAARFDITEEGLRYLRQWVN 498 + ++ L S +++ P + R L + + Sbjct: 414 LEIRDAMAYFRLAVSPADDLAFERVVNTPKRGLGDTAQQNIQRRARAAGVSLLGGARELL 473 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 G G + +R H + L + + Sbjct: 474 AQGGIGGKGANQLRTFVTSCDAWHYFVANRGNELEIKRYADQLFVLREERSRLLRELELL 533 Query: 559 ELVGHLASLLMQL---------NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + + + R + + + A+ Sbjct: 534 DENDEARESVEREIVICGARIGRCERDIAILDGNHVLLAEQILEESGYTAMWQADKTPEA 593 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + + ++ + L + ++ ++ E A V+I TL + Sbjct: 594 PGRLENLKELVKALEQFE-----NLQGFLEHVSLIMENES---EEAAEKVSIMTLHAAKG 645 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F VV L G DG++P Q + L +++R L + A+ I Sbjct: 646 LEFPVVFLPGWEDGLFPSQRSMDESGLKGV----------EEERRLAYVGITRAEALCTI 695 Query: 730 SYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 S+ + PS + EL + + PG + + + Sbjct: 696 SFAANRRVYGQWQSALPSRFIDELPEAHVEVLTPPGLYGGGYGAAGMQAGFGGGSGIEQR 755 Query: 788 PFDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 Y + + Sbjct: 756 AASADAYNSPGWKRMTERAPTRPMAQPREARN 787 >UniRef50_Q6A851 Exodeoxyribonuclease V gamma chain n=3 Tax=Propionibacterium acnes RepID=Q6A851_PROAC Length = 1049 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 133/785 (16%), Positives = 251/785 (31%), Gaps = 55/785 (7%) Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + + ++ H CH R+ EV+ D + A L + PTL PRDI+V+ + Sbjct: 277 AQSAVTHRKELPTVEIHQCHGVDRQAEVVRDVVCAALADYPTLEPRDIVVICCGRQDTAH 336 Query: 421 FIQA-VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + A + + + +PV EA ++L L SR +D+L+L +P + Sbjct: 337 LLSAGTLADIDHPAHQLRFTTPPQREHVNPVTEAVTTILGLASSRATGQDLLSLCAMPAV 396 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 RF +++ + + V+++ IRWG+D + L Q TW G+ RM+L AM S Sbjct: 397 QTRFGFSDDDQEAIERLVSQADIRWGVDPAARDKAGLGRIKQSTWLAGIERMILAIAMSS 456 Query: 540 AQGEWQS-VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 + V P + LVG LA + ++ P+ W +++ Sbjct: 457 TPPTYLGTVTPITDVGSTTIPLVGKLAEFVSRMRKAFLDTETPAPIATWKRRVSQIVDNL 516 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 A+ + + ++ + D L R + G Sbjct: 517 AAAPADAPRSALQTLALLTGLEGVAEDREFDR----QEIIDLLNWLSGIHRGRHSWFDGS 572 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 + +C + + +VV ++ P Q A L + + D + + L Sbjct: 573 IQVCRPGELTPVDHEVVIVVD------PDQEAVHADLLQGLRDENLDPAAKARQD-LLDV 625 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 AL SA+ L + RS N P + L + Sbjct: 626 AL-SARTLLVVVRQARSPVSNLTVLPGPFTRTLSQAL--------KAQSATPRCVKHGLQ 676 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQ 838 + D + A P + H + P+ + L L Sbjct: 677 PFSADEFSHHSDTAWSGFDNTAAAAAGCHPG--SQPRPHRVVLPPVAKLPESRMSLIDLT 734 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF 898 +HP R + R +++P P L +Y I ++L L + Sbjct: 735 LALSHPARTLLRARAGAPANERSTDLPVDLPLAPSSLDKYWIRSRILADLEHGFLLDDAI 794 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN---------- 948 R G P G G+ ++ Q+ R R I++ + Sbjct: 795 NAERLRGSTPPGHLGQHIVTKLAEDAMQICQRANRLRGDQDEQFIEIDFDLDEGNSPPLL 854 Query: 949 -----------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYC-ASGGNGES 996 V + G + V+ ++ S + + LW++ L A+ G Sbjct: 855 WPDELIVDPMHPVHLHGRV-GVRNHQIVHAVASRANARPLLDLWVDLLAVTVATDEPGWF 913 Query: 997 RLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDA 1056 + + R A + A L+ L + + + A ++ A ND Sbjct: 914 GVLVPNGDVLRMASPAPDHARDILAGLARVAWWSNQQLIPLPVKLAHALVELSPMAHNDY 973 Query: 1057 MLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPL 1116 + + + + ++ N D E + E S+ P+ Sbjct: 974 RTGASALQVQ----WSREWDPNWAAFLGTDVGELIAC----CHELGTTLTELSEWLFDPI 1025 Query: 1117 FRFNQ 1121 + + Sbjct: 1026 KQALR 1030 Score = 96.2 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 83/232 (35%), Gaps = 24/232 (10%) Query: 23 RERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPK 82 E DPF +++ ++ L +L+++ GIAA ID P + +L + Sbjct: 23 SEPTTDPFVRPILVAPGNAQSRSLLQSLARRHGIAAGIDTTTPLGLRERLEEDLLGVKRE 82 Query: 83 ESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK---RKLFQLSSKAADLFDQYL 139 + S++ ++ ++ F ++ +L + R + + +AAD Sbjct: 83 NDPWQPGSLALRICRVIEN--NSPGFEVVSAHLEASRRQGVPRATWTTARQAADAICALA 140 Query: 140 VYRPDWLAQWETGHLV-----------EGLGEAQAWQAPLWKALVEYTHQLGQPRWHRAN 188 D L W G + L A+AW APLW+ L+ + Sbjct: 141 RDSHDVLNAWADGATPTTHQGDTDLAGDPLDPARAWWAPLWRTLLAEPC----HVPDPVS 196 Query: 189 LYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 +Q ++ + + + P + + + +AL ++ ++ Sbjct: 197 RHQLLVDAILTQSRSEPP----IVWFSSTTTAQHDVSLAEALSASHDVTIVH 244 >UniRef50_Q4FPM1 DNA helicase II n=5 Tax=Bacteria RepID=Q4FPM1_PELUB Length = 678 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 64/527 (12%), Positives = 159/527 (30%), Gaps = 85/527 (16%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDY 310 K+ + ++ + + S L VG+ + + G + Sbjct: 204 KNHDIRNIYSNNFKYILVDEYQDTNYIQSRWLNLLSEKHKNLCCVGDDDQSIYSWRGAEI 263 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPL 367 L F V ++ + ++ + +N A + + + Sbjct: 264 KNFLE----------FDQVYKNSKVIRLEENYRSSQNILSVASNLIANNQNRVGKTLKTT 313 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + + + + E + D + L+ + +I ++V I F F Sbjct: 314 MEEGDLVKLNCFKNGKDEAIGVSDEIEKKLK--KKYSFNNIAILVRAI-----FQTREFE 366 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 LPY I ++ ++ L L +++ P + I E Sbjct: 367 ERFLKIGLPYRILGGTKFYERAEIKDCVAYLRLIHQPKDDLAFDRIVNNP----KRAIGE 422 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + +++ ++ +A + Sbjct: 423 STI---------------------------------------KLIHEFSKTNAVSLEIAS 443 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER-PLEEWLPVCRDMLNAFFLPDAETE 606 E + + + L+S L ++ WR + ++ + L + D + + + Sbjct: 444 KKLIEENLIKPKTKIGLSSFLFLMDKWRNDINIKKINHVKLLQLVLDESGYSSMLKNKKD 503 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + + +++ L + +A + Q + VN+ T+ Sbjct: 504 LENENRLENIKELLSAMKDFD-----NLENFLEHVALA---TSVDQDWDGEKVNMMTMHG 555 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F VV L G +G++P Q + +K + G +++R L + A++K Sbjct: 556 SKGLEFDVVFLPGWEEGLFPHQK------SIEEKGQNG----LEEERRLAYVGITRAKKK 605 Query: 727 LYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDE 771 IS+ + S ++EL + + + D N ++ Sbjct: 606 ALISFAMNRFYQGNWIDSMASRFIEELPEKFLEKNSFFDDSKDNEED 652 >UniRef50_A5U7M1 UvrD/Rep family helicase n=13 Tax=Corynebacterineae RepID=A5U7M1_MYCTA Length = 1101 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 123/974 (12%), Positives = 231/974 (23%), Gaps = 169/974 (17%) Query: 156 EGLGEAQAWQAPLWK---ALVEYTHQLGQPRWHRAN-LYQRFIETLESATTCPPGLPSRV 211 LGE L L H L R+ R Q + L + T +P Sbjct: 177 GQLGEHLVDTRALRDTHVELERLVHALPAGRYQRDRGPSQWLLRMLATQTQRAELVP--- 233 Query: 212 FICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFED 271 L AL ++ P L R R ++ Sbjct: 234 -----------LLDALGERMHAGKVMDFAMQMASAARLAATSPQVGQDLRRRYRVVLLDE 282 Query: 272 RELPLFRDSENAGQL-----FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAF 326 + L + VG+P+ + +G G L + L Sbjct: 283 YQDTGHAQRVVLSSLFGGGVDDGLALTAVGDPIQSIYGWRGASATN-LPRFTTDFPLSDG 341 Query: 327 VDVTPDNLLHNIQS--DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR 384 LL + ++ L + N A + + D ++ + Q Sbjct: 342 TPAPVLELLTSWRNPPQALRVANGISAEARRRSVAVRALRPRPDAPPGAVRCALLPDVQA 401 Query: 385 EVEVLHD--RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 E E + D R+ E + P V+V + R +P + Sbjct: 402 EREWIADHLRMRYQRAEADGVKPPTAAVLVRRNADAA-----AIADTLRARGIPAEVVGL 456 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 S P + +++L L + + + R+ + L L + Sbjct: 457 AGLLSIPEVAEVVAMLRLVADPTAGAAAMRV----LTGPRWRLGARDLAALWRRALTL-- 510 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 + + + + A ++ + G G Sbjct: 511 ---------------SGESPSTASPESIAMAASADADNPCLADAISDPGSAEGYSVAGYG 555 Query: 563 HLASLLMQLNIWRRGLAQ--ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 + +L +L+ R L + E V A + ++ Sbjct: 556 RIGALAGELSALRGRLGHSLPDLVAEVRRVLGVDCEVRASAPVSGGWAGPEHLDAFADVV 615 Query: 621 AEGLG--AQYGDAVPLSLLRDELA-QRLDQERISQRFLA---GPVNICTLMPMRSIPFKV 674 A + ++ L L + + + L V + T+ + + ++V Sbjct: 616 AGYAERASARSSEASVAGLLAYLDVAEVVENGLPPAELTVACDRVQVLTVHAAKGLEWQV 675 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD------------------------ 710 V + ++ GV+P ++ + + R R Sbjct: 676 VAVAHLSRGVFPSTVSRSSWLTDPAELPPLLRGDRASAGAHGIPVLDTSAVADRKQLSDK 735 Query: 711 --------------DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 ++R L A+ A+ L +S R PS + EL D I Sbjct: 736 ISEHRRLLDRRRVDEERRLLYVAVTRAEDTLLVSGHHWGPTGTKPRGPSEFLCELKDIID 795 Query: 757 QSHYLPGD--------EALNCDESEARVKAHLTCLHTRMPFDPQNY-------------- 794 +S A DE + + P + Sbjct: 796 RSAAAGDPCGVVEQWASAPAGDERNPLCDNAIEAVWPADPLAARRGDVERGAALVAAAMS 855 Query: 795 ----------QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHP 844 R A + + LP + + +L P Sbjct: 856 ADLPGSTTDIDHPPRPGDAPWSTDVDALLAERAHAARGAPARGLPNHLSVSSLVELVGDP 915 Query: 845 VRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAA 904 V + RL + Sbjct: 916 VG--ARQRLMCRLPKRPDP----------HAWLGDAFHAWVQQFYGA-------ELLFDL 956 Query: 905 GDLPYGAFGEIFWETQCQEMQQL--ADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPD 962 GDLP A E+ + +Q+ A A + ++ + G + V D Sbjct: 957 GDLPGAADREVGDPEELAALQRAFTASSWAARTPAAVEVPFEMPIGDTVVRGRIDAVFVD 1016 Query: 963 GLLRWRPSLLSVAQGMQL-----------WLEHLVYCASGGNGESRL-----FLRKDGEW 1006 + + L + A G S + ++R Sbjct: 1017 PDGGATVVDWKTGKPPHGPAAMRQAAVQLAVYRLAWAALRGCPTSSVRTAFYYVRSGITV 1076 Query: 1007 RFPPLAAEQALHYL 1020 L A L L Sbjct: 1077 VPDELPAPGELAML 1090 >UniRef50_P44804 ATP-dependent DNA helicase rep n=275 Tax=Proteobacteria RepID=REP_HAEIN Length = 670 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 71/629 (11%), Positives = 168/629 (26%), Gaps = 93/629 (14%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFIC---GIS 217 + Q L K L + +L + I + + + Sbjct: 109 DEHDQFALLKELTADVLK------EDKDLLRELISVISNWKNDLISPKQAFALARDAKYQ 162 Query: 218 ALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLF 277 Y + + + + ++ +K + R ++ + Sbjct: 163 TFAKCYERYATQIRTYNALDFDDLIMLPTLLFK-QNEEVRSKWQAKIRYLLVDEYQDTNT 221 Query: 278 RDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 E L VG+ + + G + + D P + Sbjct: 222 SQYELIKLLVGDRACFTVVGDDDQSIYSWRGA----------RPENMVRLRDDFPRLNVI 271 Query: 337 NIQSDILELENRAV-AGVNIEEFSRSDNKRPLD--PLDSSITFHVCHSPQREVEVLHDRL 393 ++ + + A + I+ +K+ + + + E E + L Sbjct: 272 KLEQNYRSTQRILHCANILIDNNEHVFDKKLFSTIGKGEKLLVIEAKNEEHEAERIVAEL 331 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 +A +D ++ + +PY IS + S ++ Sbjct: 332 IA-HRFSRKTKYKDYAILYR-----GNHQSRLLEKVLMQNRIPYKISGGTSFFSRAEIKD 385 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 ++ L L ++ L +++ P + +I L+ L + Sbjct: 386 MMAYLRLVVNQDDDAAFLRIVNTP----KREIGTATLQKLGE------------------ 423 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 A E ++++ ++ + + L + Sbjct: 424 ---------------------LAQEKHISLFEAIFEFELIQRITPKAYDSLQKFGRWIVE 462 Query: 574 WRRGLAQERPLEEWLPVC-----RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 + + P + + L + E + + + G + Sbjct: 463 LNDEIQRSEPERAVRSMLSAIHYEEYLYEYATSPKAAEMQSKNVATLFDWVADMLKGDET 522 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + + L+ + L R ER + V + TL + + F V L+GM +G+ P Q Sbjct: 523 NEPMNLNQVVTRLTLRDMLERGEDDDDSDQVQLMTLHASKGLEFPYVYLIGMEEGILPHQ 582 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSV 746 + D +++R L + AQ++L S Q PS Sbjct: 583 TSI-------------DEDNVEEERRLAYVGITRAQKELTFSLCRERRQYGELVRPEPSR 629 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESEAR 775 + EL + + + + Sbjct: 630 FLAELPNDDVLWERDKPKLTTEQKQEKTQ 658 >UniRef50_D1R4U3 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4U3_9CHLA Length = 677 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 67/525 (12%), Positives = 138/525 (26%), Gaps = 91/525 (17%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIY 312 P L K R R ++ + + A L VG+ + +G G + Sbjct: 209 PDVLEKYQERYRYIMIDEYQDTNPVQYKLASLLSRKYQNLCVVGDDDQSIYGWRGAEVKN 268 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV---NIEEFSRSDNKRPLDP 369 +L D ++ + N A + + Sbjct: 269 IL--------------DFSDATTIKLEQNYRSTNNILKAANGVISHNQTRYQKVLWSNRG 314 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 I S + E E + R+ M E+ L RDI ++ + +F A Sbjct: 315 EGDLIEVFHAPSDKEEAEAVVYRIAHMREKYQ-LKWRDIAILYRSNA-----LSRLFELA 368 Query: 430 PADR----------YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + +PY I + + L + + E +L +++ P Sbjct: 369 LMNYAWKDGDQWIKGIPYEIFGGTEFYERREVRDLFAYLRVIANPLDQEALLRIINQP-- 426 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 R I E L + + ++ E + Sbjct: 427 --RRGIGEASLDAATAYNRSHQLPLWNVLKSLANREPAVQEVSS---------------- 468 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 + + L + L ++ Q+ + Sbjct: 469 ---------------HWSQKALDSLQGFIGILENSKQRFEQDFSYALTELIEAVNYKKAI 513 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGA------QYGDAVPLSLLRDELAQRLD-QERISQ 652 + ++ + Q ++ + ++ L + D + Sbjct: 514 NDEVKSAQMRDFKWENVQEFVSSLVEFNESFLKEFNKTPTLHDFITSTPLQQDWNQSQKN 573 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 VN+ T + + FK L+G+ D + P K +++ Sbjct: 574 TQQKDQVNLMTFHSSKGLEFKACFLVGIEDHIIPH-------------EKSLKEVGVEEE 620 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYI 755 R L + A+Q L IS + + E PS + E+ + Sbjct: 621 RRLMYVGITRARQFLTISMARKRKRMGKEYASKPSRFLHEIPKEL 665 >UniRef50_B3PNG5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PNG5_MYCA5 Length = 726 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 65/518 (12%), Positives = 159/518 (30%), Gaps = 76/518 (14%) Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKL 306 + D K K R + ++ + + L S VG+P + Sbjct: 198 LFYDPKFEEISHKWSKRFKYLLIDEFQDTSELQYKIVKILAGSGNITVVGDPDQTIYSWR 257 Query: 307 GRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDN 363 D + F P+ + ++ + + N A ++ +F Sbjct: 258 NADI----------NIIMNFDKDFPEAVTIKLEQNYRSTKKILNAANNLISYNKFRLDKK 307 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 + I F+ S + E + ++ + + ++I ++ I SY Sbjct: 308 LFTDNEEGEDIDFYCGFSEEAEARKIASKISELKR--KRVQLKNIAILFR-ISSY----S 360 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 A + Y + ++ ++ L + +L +++ P Sbjct: 361 RAIEEALINENTIYKLFGSTKFYQREEVKDALAYLRVIHDG-SEISLLRVINKPA----R 415 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 I + L ++ E+ ++ + Sbjct: 416 RIGTSTIDKLLKFSKENN-----------------------------------LDLFKCL 440 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 ++ + E + +LASL+ ++ RR + + + + F + Sbjct: 441 DTKFNEIQKNLHIQMETLKNLASLINEIRWARRIIQGNQIYLTLKEFMINNIKYFEEYKS 500 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 E +E I A + + E+ D++ A V++ T Sbjct: 501 SEEEYENRMENFLNLIEAIHVWETKHPHGTIDEYLQEITLITDRDVEDD--AASYVSLMT 558 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLA-------PLGFDLMSQKPKRGDR----SRRDDD 712 + + + F V ++G+++ ++P + A + ++ + + +++ Sbjct: 559 IHNAKGLEFDYVFVVGLSEDIFPLRRAITISPKFDFTYLPFEKEEELQKQPENIEGLEEE 618 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 R L A+ A+ KL++SY N PS ++E Sbjct: 619 RRLAYVAMTRARTKLFLSYAVNRRGLNK---PSRFLKE 653 >UniRef50_UPI0001AEED98 ATP-dependent DNA helicase n=3 Tax=Streptomyces RepID=UPI0001AEED98 Length = 1079 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 105/935 (11%), Positives = 211/935 (22%), Gaps = 105/935 (11%) Query: 128 SSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG-----QP 182 + + ADLF + L + E A Q L + H Sbjct: 82 AHQDADLF-------AEPLRLLSGPEQDVAVRELLAGQIELGRQGRARVHWPDELRACLT 134 Query: 183 RWHRANLYQRFIETLESATTCPPGLPS------RVFICGISALPPVYLQALQALGKHIEI 236 A+ + + L R ++ YL L A G Sbjct: 135 TRGFADEVRAVLARSRELGLGADALAEFARRGGRPDWSAAASFLAEYLDLLDAQGTLDYA 194 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG----- 291 L+ + P +L ++ + L + G Sbjct: 195 ELVHRAVLLA-----ERPETARQLAETYDAVYVDEYQDTDPAQVRLVRALAGNHGPAVPG 249 Query: 292 ------EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHN-----IQS 340 G+P + + G D +L E+ + D + Sbjct: 250 AGGGRTLVAFGDPDQSIYAFRGADVNGILEFPETFRRADGAPAPVAVLTTGRRSGAHLVE 309 Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 + R + R+ + + + E++ + D +L + Sbjct: 310 ATRLVTRRMPLTRLSADTVRAHRSLSPARDGGRVEAYTYPTTGAELDNIAD-ILRRAHLE 368 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 + ++ V+V P ++ A +P I H A + Sbjct: 369 EGVPWGEMAVLVRSGGHTIPAVRR----ALTSAGVPLDIDGNDLPLRHEPAVAPLLTALR 424 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 + +D PV D W++ + Sbjct: 425 AAATAALQDRAEEEAGPVPEPEPDAG--TQDTAPAWLDTETALTLLASPLAALDAADQRR 482 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 R + L E L L R LA+ Sbjct: 483 LGRALRDEERAAGNPLPPPSDTLLARALAEPERLVTHEGYAHGARLLGELLRRARTLLAK 542 Query: 581 ERPLEEWLPVCRD-------MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 EE L D + + A A ++ + Sbjct: 543 GGSAEEALWELWDGTTWPQRLERSARRGGAAGRNADRDLDAVCALFATAARAEERTGGRG 602 Query: 634 LSLLRDELAQR--LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 E+ + + V + T + + +++V + G+ +GV+P Sbjct: 603 ALNFLAEIEAQDIAADTLTRRAARPDAVRLMTAHRSKGLEWRLVVVAGVQEGVWPDLRRR 662 Query: 692 LGFDLMSQKPKRGDRSR------RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 + + G ++R LF A A ++L ++ + +D PS Sbjct: 663 GSLLEADRIGRDGLAEPLPPGALLAEERRLFYVAATRAAERLVVTAVKAPAEDGD--QPS 720 Query: 746 VLVQEL---IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 + EL + P A E A R + + Sbjct: 721 RFLSELGVEPKDVSSRPRRPLSVAALVAELRATTVDPRVSATLREAAAHRLAKLAALTDE 780 Query: 803 ARE------WLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFW-AHPVRAFFQMRLQV 855 + V P + L + ++ F ++ Sbjct: 781 DGRPLVPTAHPDRWWGMREPTRSQVPLRDRDAPVVLSGSALDQLANTCALQWFLGREVKA 840 Query: 856 NFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL------FRRFRAAGDLPY 909 + + L + + L A Sbjct: 841 DAPAS------------AAQGFGNVVHVLADEVASGRTPADLDVLMERLDSVWDALAFDA 888 Query: 910 GAFGEIFWETQCQEMQQLADRV----IACRQPGQSMEIDLACN----GVQITGWLPQVQP 961 E Q +++ + + D+ V+I G + +V+ Sbjct: 889 PWKSVQEKENARQALERFLEWHTLDRAGRTPVASEHDFDITLGAGPYEVRIRGSMDRVEQ 948 Query: 962 DGLLRWRPSLLSVAQGMQ------LWLEHLVYCAS 990 D R + + VY + Sbjct: 949 DPRGRAYVVDFKTGKQAPTAAEVAHHPQLAVYQLA 983 >UniRef50_A1WZS5 ATP-dependent DNA helicase UvrD n=3 Tax=Gammaproteobacteria RepID=A1WZS5_HALHL Length = 725 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 69/550 (12%), Positives = 145/550 (26%), Gaps = 82/550 (14%) Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD- 290 + + R Y DP L R ++ + L Sbjct: 182 RRGGLVDFSELLLRAYELLRDDPELLGHYQRRFAHILVDEFQDTNALQYRWLKLLGGEQS 241 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV 350 VG+ + +G G + ++ F D + ++ + Sbjct: 242 ELFVVGDDDQSIYGWRGA----------RVENIEHFRREMGDVRVVRLEQNYRSTGTILD 291 Query: 351 AGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 A + E IT + + E + DR+ + E+ D Sbjct: 292 AANRLIEHNSGRLGKQLWTDGWSGEPITLYAAFNEVDEARWVVDRIRQL-SEEGGYGHAD 350 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 ++ LP+ + ++ ++ L L +R Sbjct: 351 FAILYRSNAQ-----SRALEHELHAARLPFRVYGGLRFFERAEVKDALAYLRLVANRHDD 405 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 +++ P I + + +R E+ Sbjct: 406 ASFERVVNTPP----RGIGAKTVDAVRYAAREA--------------------------- 434 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 W++ S L A LAS L +++ L ++ Sbjct: 435 ------------DVSMWRAARELTGSRALAARARNALASFLERIDALDSELTDRPLHDQV 482 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ-YGDAVPLSLLRDELAQRLD 646 V EA + +++ A + D PL+ L+ Sbjct: 483 EQVIART--DLRRHHERDEARLENLDELVTAARTFAQRDEPEDDLDPLAAFLTH--AALE 538 Query: 647 QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR 706 V + TL + + F VV L+GM +G++P +++ + Sbjct: 539 AGEGQADDWEHSVQLMTLHSAKGLEFPVVFLVGMEEGLFPHRMSVE------------EP 586 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGD 764 R +++R L + A+Q+L +++ + PS + E+ + Sbjct: 587 GRLEEERRLCYVGMTRARQRLILTHAEKRRLHGMDQLARPSRFLTEIPGEHLEEVRPRMS 646 Query: 765 EALNCDESEA 774 A Sbjct: 647 VRRGPPSVPA 656 >UniRef50_C5VEC6 ATP-dependent DNA helicase n=2 Tax=Corynebacterium matruchotii RepID=C5VEC6_9CORY Length = 1095 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 103/814 (12%), Positives = 201/814 (24%), Gaps = 112/814 (13%) Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLES 319 L R + ++ + LF VG+P+ + +G G L+ + Sbjct: 273 LRNRYKVVMLDEYQDTSHAQRMLLRSLFAGGAVTAVGDPMQSIYGWRGATAAN-LNRFVT 331 Query: 320 SQELDAFVDVTPDNLLHNIQS--DILELENRAVAGVNIEEFSRSDNKRPLDPLD----SS 373 +D + L + ++ ++L L N V + +PL Sbjct: 332 DFAIDPQEPAVKNELTISFRNPPEVLHLANAVATTVLGAPSDPNRPVQPLSSPPSAVAGD 391 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I + E E + D L + T P V+V P R Sbjct: 392 IQLGYFPTIADEREFVADTLAELYNNRDTAKPFTAAVLVRQNAHTGPI-----AKEFQRR 446 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY I P + +++ ++ S L +L P + ++ L Sbjct: 447 GIPYEIVGINGLLDVPEVADMVAVATMLIRPTDSAAALRILGGPAVGL----GVRDIQAL 502 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + E R G+ +L E+ G ++ E Sbjct: 503 ARRAGELSGRATSGKATDSVDPAVKLGEEIAE------VLAADAENIVGLTDAIADLGEP 556 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 E L L QL R+ +A L + ++ + + Sbjct: 557 EKYSEEGYRRLGRLSSQLRRLRQTVAAGSSLPDLFAEIERVMGIRTEVLSRENPRLDGAV 616 Query: 614 Q--QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER----ISQRFLAGPVNICTLMPM 667 + E LS L D + QE + V I T+ Sbjct: 617 GTIHLDKLHQEVANFATIPNTTLSQLLDYFTEARCQESGLELGEVQVRNDRVQILTVHKA 676 Query: 668 RSIPFKVVCLLGMNDGVYPRQLA------------------------------PLGFDLM 697 + + + VC+L N+ Y + A + Sbjct: 677 KGLEWNTVCVLHANNRDYDKTRASTWLTNPAMVPSTLRGDAAESGDTVGSPVLDTSWLEN 736 Query: 698 SQKPKRGDRSRRDDDR--------YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 + + + ++ R LF A+ A Q+L ++ + S + Sbjct: 737 RAQLEAECAAHIEEFRQSLSEESTRLFYVAVTRAAQRLIVTASALDDNERDTEPCSNFLL 796 Query: 750 ELI----DYIGQSHYLPGDEALNCDESEARVKAHLTCLHT-------------------- 785 D I H A + + + V+ T + Sbjct: 797 IKRNASTDSIVAWHDPAEAAATDTSDEPSEVQQSPTGMFPKPTKTVDLLTGADLVRKAIA 856 Query: 786 -RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHP 844 + DP + E + + + L + + +P Sbjct: 857 QQSVGDPIAFNQDNDLFQLWEK-DVTALIEEYQRLQSDIVEVELSPELTATDIVALKQNP 915 Query: 845 VRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAA 904 + + R V F+ R L Sbjct: 916 EQFARRQRRPVPFKPN------------RYAKRGTEFHSWLEQRFGAPTLLDESELPGMD 963 Query: 905 GDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGL 964 ++ G E+ + A + +++ +G+ I G + V D Sbjct: 964 EEITPGQLQELKDKFV-------AGQFADRTPMFVEQPFEVSIDGIVIRGRMDAVFRDES 1016 Query: 965 LRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL 998 W Q + + Sbjct: 1017 G-WHIVDWKTGQLPSRADMRYLMMQLAVYRIAWA 1049 >UniRef50_A1SGT7 UvrD/REP helicase n=1 Tax=Nocardioides sp. JS614 RepID=A1SGT7_NOCSJ Length = 1060 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 98/793 (12%), Positives = 194/793 (24%), Gaps = 74/793 (9%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRD 309 I+ + +L R ++ + L + VG+P + +G G + Sbjct: 209 IEAETHRDELRARIGAVFVDEYQDTDPGQVALLRALAGDGRDLVVVGDPHQSIYGFRGAE 268 Query: 310 YIYLLSD---------LESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 +L + LL Q L Sbjct: 269 VRGILEFPTAFPRTDGAPADVVALRTTRRFGPRLLIASQRVAGRLALPGSIPEEARSAFL 328 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + +P D + + + E E L D L ED + + V+V + P Sbjct: 329 APEAQPNPLGDGRVLVRTFDTERAEAEHLADLLRRAHLEDD-VPWDQMAVLVRSGRTSIP 387 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 ++ G+A + SD P + + L D + +A Sbjct: 388 PLRRALGAAGVPVEV---ASDEVPLVRDPAVLPLLDALRAVVDLDTRPDEGEVEH---VA 441 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 + + R + G D + + S Sbjct: 442 PENGWSLDPARAEGLLLGPLGGLDAGDLRRLARRLRTREKEQGKAEAR------TPRTSR 495 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR------DM 594 + V+ GL V +L L R L EE L Sbjct: 496 DLVRRVVVEPGFLDGLDGPEVVRARALAQLLLDAREALRVGASAEELLWTLWSRTGWPAR 555 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIA-EGLGAQYGDAVPLSLLRDEL--AQRLDQERIS 651 L A+ + D V + L Q Sbjct: 556 LRRSVDLGGGAARRAHRDLDSVCALFDVAARADEQRDHVGVRAFLATLVQQQIPADTLAE 615 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG------D 705 + V + T + + +++V + + +P + + G Sbjct: 616 RGARGAAVRLLTAHRAKGLEWRLVVVAHVQQDGWPDLRRRSTLLQADRIGEHGVVPPVST 675 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE 765 R ++R LF A A+Q+L ++ + + PS + EL + + P Sbjct: 676 RELLMEERRLFYVACTRARQRLVVTAVASPDDEGE--QPSRFLDELGVGVERVVGRP-PR 732 Query: 766 ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA--ASQAGKAHSEFVQP 823 L+ A ++ L T P + R + A Sbjct: 733 PLSLPGLVAELRRTLADPETSEPLREAAARRLARLAPEVRIADPSSWWGTRAATRSVEPI 792 Query: 824 LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 P V L+ P + F + + R + + ++ Sbjct: 793 RDPGQPVPVSASVLEAVAVCPTQWFLEREAGGSAR------------AHQSANLGELLHA 840 Query: 884 LLNALVEQDDAE------RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP 937 L + + D + + + +A + Sbjct: 841 LAQRVAAGELEPAVEVLMEHVDAVWDRLDFRTPWSRAREHDRVRAAIGRFLQWHLANPRE 900 Query: 938 GQSMEIDLA-------CNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ------LWLEH 984 + E V+I+G+ +V+ D L + ++ Sbjct: 901 LIATEAPFTTVVALEGGEQVKISGYADRVELDADGHVVVVDLKSGRTKPSNRAVEGHVQL 960 Query: 985 LVYCASGGNGESR 997 +Y + +G Sbjct: 961 GLYQYAVDHGALA 973 >UniRef50_B7AA42 UvrD/REP helicase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AA42_THEAQ Length = 701 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 82/614 (13%), Positives = 169/614 (27%), Gaps = 112/614 (18%) Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 K+L++ G P H F L L + Y +AL+A Sbjct: 144 KSLLDRAKNQGVPPEHLLLELPEFYAGLSRG-----RLQDVLH---------RYQEALRA 189 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF-N 288 G +L +D L ++ R R ++ + L Sbjct: 190 QGALDFGDILLY----ALKLLEEDGEVLKRVRKRARFIHVDEYQDTNPVQYRFTRLLAGE 245 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR 348 VG+P + D +L F P ++ ++ + E Sbjct: 246 EANLMAVGDPDQGIYSFRAADIRNILD----------FTQDYPKARVYRLEDNYRSTEAI 295 Query: 349 ---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 A A + RP+ + S + E + + + + Sbjct: 296 LRFANAVIVKNALRLEKTLRPVKKGGEPVRLFRAESARDEARFVAEEIARL-----GPPF 350 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 + V+ + A A R +P + ++ ++ L + Sbjct: 351 DRVAVLYRTNAQ-----SRLLEQALASRGIPARVVGGVGFFERAEVKDLLAYARLSLNPL 405 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 + + +L+ P I + ++ E G+ + V L LP Sbjct: 406 DAVSLKRVLNTPP----RGIGPATVEKVQAIARERGLPL-FEALKVAALTLPRPEPLRAF 460 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 L L+ A A+ ++ +L + + E Sbjct: 461 LALMEELMDLAFGPAEAFFRHLLLATDYPAYLKE-------------------------- 494 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 + + ++ A+ L D++ L Sbjct: 495 ------------------AYPEDAEDRLENVEELLRAAKEAES-----LMDFLDKV--AL 529 Query: 646 DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 G V + TL + + F VV L+G+ +G+ P + + Sbjct: 530 TARAEEPAEAEGRVALMTLHNAKGLEFPVVFLVGVEEGLLPHRSS------------LST 577 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQSHYLPG 763 + +++R LF + AQ++LY+SY PS ++E+ + + + + Sbjct: 578 QEGLEEERRLFYVGVTRAQERLYLSYAQEREIYGRLEPVRPSRFLEEVDEGLYEVYDPYR 637 Query: 764 DEALNCDESEARVK 777 + R Sbjct: 638 QSSRKPTPPPHRAL 651 >UniRef50_A0LDC5 ATP-dependent DNA helicase, Rep family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDC5_MAGSM Length = 673 Score = 212 bits (538), Expect = 8e-53, Method: Composition-based stats. Identities = 90/628 (14%), Positives = 172/628 (27%), Gaps = 97/628 (15%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICG----- 215 + Q L+K L E + I + P L R Sbjct: 118 DSSDQERLFKRLCEELGFADAYWTPK--RLTHTIGRWKDDGIRPQDLTDREIRKAWERAR 175 Query: 216 ISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELP 275 I + Y QAL LL C W ++PA LA R R ++ + Sbjct: 176 IQQMYERYQQALLQSNAMDFGDLLLH--CLQLWQ--QEPAILAAFQQRFRYLLVDEYQDT 231 Query: 276 LFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL 334 L VG+ + + G +L F + P Sbjct: 232 NHVQYRWICALSGLHQNLCVVGDDDQSIYSWRGARIENILK----------FEEDFPQTK 281 Query: 335 LHNIQSDILELENRAVAG---VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHD 391 + ++ + N A +N + D +I F+ + + E + Sbjct: 282 IIRLEQNYRSSGNILKAASGLINHNKGRMEKQLWTEDAQGDAIHFYQAENDEDEARFVAS 341 Query: 392 RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVL 451 +L + + ++V +PY + + Sbjct: 342 EILTLCPAGD---YQQAAILVRTARQ-----TRSLEEGLMRAGIPYQVVGGLRFLDRAEV 393 Query: 452 EAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 ++ L + S ++++P Sbjct: 394 RDALAYLRVVASNRDDVAFERVINLP---------------------------------- 419 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 + G + L A + + ES+ + LA+ + + Sbjct: 420 ---------KRGIGPGALQSLREIASQERCSLLHAARFAVESNTMKGAAAKGLAAFIQLI 470 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 R LA + E L + + + + Sbjct: 471 EHARSMLADDITPAEMLTKLLALSG--YRDYVRDLEKGNDRIDNLDELRNALARTES--- 525 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 L L +E+A D + +A V I TL + + F V L+G+ + V P + Sbjct: 526 --LQLFLEEVALATDLQ--DGGPVANRVVISTLHAAKGLEFPWVFLVGVEEDVMPHK--- 578 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP--SVLVQ 749 ++++P+ G +++R L + A+Q+LY++ R N P S ++ Sbjct: 579 ---LALTEQPEIG----LEEERRLAYVGMTRAKQRLYLTMARRRWLFNKPVMPIKSRFLK 631 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVK 777 EL I + S A + Sbjct: 632 ELPQEILEDRGFRVSSRRGATGSLAGLP 659 >UniRef50_C8XDJ8 ATP-dependent DNA helicase PcrA n=2 Tax=Actinomycetales RepID=C8XDJ8_NAKMY Length = 864 Score = 212 bits (538), Expect = 8e-53, Method: Composition-based stats. Identities = 72/622 (11%), Positives = 160/622 (25%), Gaps = 81/622 (13%) Query: 185 HRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPC 244 + A + I L++ P R + + VY + L + Sbjct: 166 YPARMLAASISNLKNELIDPETALERADSDQATLVAKVYQGYQERL-RAASALDFDDLIM 224 Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN---------------- 288 + + + PA R R ++ + L Sbjct: 225 QTVFLLQRHPAVAEHYRRRFRHVLVDEYQDTNHAQYLLVKALVGGTADEQEVRTADGELV 284 Query: 289 --------SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS 340 VG+ + + G ++ F P+ ++ Sbjct: 285 RAAASEVPPAELVVVGDADQSIYAFRGATIRNIVE----------FERDYPNAQTIMLEQ 334 Query: 341 DILELENRAVAGVN-IEEFSRSDNKRPLDPLDSSITF--HVCHSPQREVEVLHDRLLAML 397 + + A + I + K +V + E + + + A++ Sbjct: 335 NYRSTQTILSAANSVIARNPQRRAKNLWTAQGGGTRITGYVGDNEHDEAQFVGKEIDALV 394 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 + + D+ V + +PY I ++ ++ Sbjct: 395 DAGEAV-FGDVAVFYRTNSA-----SRSLEDVFIRNGMPYRIVGGVRFYERKEVKDALAY 448 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L + ++ +L+ P R I + + + I +G E+ Sbjct: 449 LRAVANPDDEINLRRILNTP----RRGIGDRAEACVSVFAERERIGFGEALQRTGEIPGL 504 Query: 518 ATGQHTWRFGLTRMLLGYAME-----SAQGEWQSVLP-----YDESSGLIAELVGHLASL 567 A +L G E +VL + + + L +L Sbjct: 505 AARSANSLSSFAELLAGLRSEVGFGMEPADLLTAVLERTGYRAELENSEDPQDGSRLENL 564 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 +++ R + D A + Sbjct: 565 DQLVSVLRETTETLLAGGGLAALGLAADAGPEPGDGADAPAEPGP--------SADEDVP 616 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 L + ++L+ D + + G V + TL + + F VV + G DG++P Sbjct: 617 PDAGDLLLAVLEQLSLVADADSVP-DSAEGMVTLMTLHTAKGLEFPVVFVTGWEDGIFPH 675 Query: 688 QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPS 745 + GD S ++R L + A ++LY++ S Sbjct: 676 ------------QRALGDDSELAEERRLAYVGITRAMKRLYVTRAMMRSAWGQPAANPAS 723 Query: 746 VLVQELIDYIGQSHYLPGDEAL 767 + ++ + + D Sbjct: 724 RFLDDIPAELIEWRRTDADARA 745 >UniRef50_C6HUX3 Putative ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUX3_9BACT Length = 796 Score = 212 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 81/728 (11%), Positives = 181/728 (24%), Gaps = 93/728 (12%) Query: 151 TGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSR 210 G + Q L + ++ + + + ++ + + T P L R Sbjct: 115 AGLPPDFTVSDAGDQKALVREIMRRHKVSEEDVAPQ-EILRQISQWKNARQTPGPELARR 173 Query: 211 VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFE 270 + G + + + CR P L + Sbjct: 174 L--FGSRRFMATCYEEYEEGLRKNRSLDYDDLLCRLVGLLSSQPDVATALRQEFHHILVD 231 Query: 271 DRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV 329 + + E L VG+ + + G + + F D Sbjct: 232 EYQDTNPLQEELIRLLSRERRNVTVVGDDDQSIYRFRGAEV----------AHIQRFSDH 281 Query: 330 TPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREV 386 P + + A + + + + S + + E Sbjct: 282 YPGAGRVLLSRNYRSTSAIVDSATSVIRKNDGRYMKTVTAVRGGGSPVLLMEFPDEEAEA 341 Query: 387 EVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 + L + P V+ P A A +P+ Sbjct: 342 RGVAGILREWIA--GGGRPSRAAVLFRTNAQSLP-----LEKAMAAAGVPFFRPGGGGLL 394 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 ++ L L + F + + +VP +E + L Sbjct: 395 ESREARDLVAYLRLLVNPFDRLSLARIFNVPP----RGQGDEAVEELSALSEAH------ 444 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 + L R+ G+ ++L + ++ Sbjct: 445 -------------PELPVAELLERLAERGGRREPLGKLSALLREGSEAASRGDV------ 485 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII----AE 622 PL V +L + E + + Sbjct: 486 ----------------PLSLLDRVVAATGYREWLTREKDEETRRRRLETLEEFRGLAGDF 529 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + PL+ ++L + V + T+ + + F V + G+ D Sbjct: 530 VREEDREASGPLAAFLEDLTLSREG---PDAEGRERVGLMTIHQSKGLEFDCVVVAGLED 586 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 + P + G + +++R LF A+ A+++L++++ + Sbjct: 587 QLLPFRSFAGGRSS----------TDIEEERRLFYVAMTRARERLHLTWARTRRIYGKTQ 636 Query: 743 F--PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 PS ++++ + A + S R+ + + +R Sbjct: 637 SFGPSPFLRDIPGELSAGDRPVFVRAPSAPSSSGRLPGQSRDGGSGFSPSFGHPSRRDRL 696 Query: 801 SYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFW----AHPVRAFFQMRLQVN 856 + P A K +P P P ++ + + HP R + L Sbjct: 697 ASPSVGRPVFRGASKVERRQGEPSPAEGPASISGGERKDWIGKKVRHP-RFGEGVVLDAR 755 Query: 857 FRTEDSEI 864 D E+ Sbjct: 756 SPDPDLEL 763 >UniRef50_A4F8N5 Probable ATP-dependent DNA helicase n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4F8N5_SACEN Length = 1078 Score = 212 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 133/926 (14%), Positives = 233/926 (25%), Gaps = 101/926 (10%) Query: 168 LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVF-ICGISALPPVYLQA 226 L L E+ + R H A R IE A LP + + L L Sbjct: 176 LAGELAEHLVRPDDLRAH-AEALCRTIENAPRAKRQKAELPKDLQKVVATQRLRVALLPL 234 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKD---PAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 L + + P +A R ++ + Sbjct: 235 LAEYAQRKRREAAMDFADQMSLAAGLAAEHPEVVAGERERFGAVLLDEYQDTGHAQRVLL 294 Query: 284 GQLFNSDG---EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS 340 LF VG+P A +G G L + D+ LL + ++ Sbjct: 295 RSLFGQGRTMPVTSVGDPAQAIYGWRGASAAN-LPRFTTDFPKDSMAPARRYGLLTSFRN 353 Query: 341 --DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 ++L + N A + + + I + ++E + + DR+ A Sbjct: 354 PPEVLRVANAVSAPLREAGLEVEELRAKDGAEAGDIRVALADDVRQERDWVADRIAAQWH 413 Query: 399 E--DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 D P V+V + A+ DR LP + + +S Sbjct: 414 AALDENGRPPTAAVLVRRRADMADLAAAL-----RDRGLPVEVVGLGGLLDEAEVRDLVS 468 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 L + + L + +R+ + + L E G R Sbjct: 469 ALRMLVDPLAGTAAMRL----LTGSRWRLGAADIAALWDRARELGER---------AFGA 515 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 P + T L G ++ + + L +L RR Sbjct: 516 PESEDPTAAVAA---ALPGEHAEQAGLVDALDDPGNAERYSEPGYQRIRRLGRELANLRR 572 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 L Q P E V R +L A ++ + + L Sbjct: 573 RLEQPLP-ELVADVERTLLLDIESLSRPGGAGRIHLDAFADVVTDFATASPSATLPALLD 631 Query: 637 LRDELAQRLDQERISQRF-LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 + D + V + T+ + + ++VV L + V+P + + Sbjct: 632 YLAAAERAEDGLEPGEVEVADDRVQVLTVHAAKGLEWEVVALPHLVRDVFPGKRKASSWL 691 Query: 696 -------------------LMSQKPKRGDR----------------SRRDDDRYLFLEAL 720 L + + DR R ++R L A+ Sbjct: 692 RAVTELPARLRGDAQDLPRLDLDRLQGMDRKEIVEALEAHDDEFEDRRLTEERRLLYVAV 751 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 +++ L +S + + + PS + +L + + ++ +A Sbjct: 752 TRSERSLLLSGHWWAEGGDKPKGPSDFLLQLAEVVKSPDVGVVEQWSPQPPEDAPNPLAE 811 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 P DP + A L A A + + V L Sbjct: 812 AVRSAEWPVDPLGTRRDAVAEGANLVLAALDAVDSAAPDEEDEDGWARDVDVLLAERAAA 871 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG---------LSRYQINQQLLNALVEQ 891 + L V+ E ++ D L R L Sbjct: 872 ARRRDQVRLPEHLSVSQLVELADDADALARRLRRPLPYPPNPMTRRGTAFHSWLEHRFTS 931 Query: 892 DDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQ 951 AA + E Q LA + + GV Sbjct: 932 TALLDFDELPGAADESATPHDD---LEMLQQAF--LAGSWAERTPHRVEVPFETQVEGVV 986 Query: 952 ITGWLPQVQPDGLLRWRPSLLSVAQGM----------QLWLEHLVYCASGGNGE-----S 996 + G + V D W QL L + A G + Sbjct: 987 VRGRMDAVFADSDGGWTVVDWKTGAVPAGDQVRALSVQLAAYRLAWSALSGAPLEKVRAA 1046 Query: 997 RLFLRKDGEWRFPP-LAAEQALHYLS 1021 ++R D R L AE L Sbjct: 1047 FHYVRHDRTLRPADLLDAEGLRELLR 1072 >UniRef50_Q2GE51 Helicase, UvrD/Rep family n=2 Tax=Neorickettsia RepID=Q2GE51_NEOSM Length = 630 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 65/508 (12%), Positives = 144/508 (28%), Gaps = 94/508 (18%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDS-ENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 KD L K + R ++ + VG+ + +G G + Sbjct: 210 KDAETLEKYKEKFRYIMVDEYQDTNLCQYLWLRLLAQKHSNICCVGDDDQSIYGWRGAEV 269 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS---DNKRPL 367 +L F + ++ + A NI + ++S Sbjct: 270 GNILR----------FAKDFEGAKVIKLEQNYRSTNKILTAAHNIIKNNQSRLTKKLWTA 319 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 P I ++E + + D ++V + F F Sbjct: 320 YPGGEEIQIFTYMDSEQEARAIIRMIKERKLL---CRYSDTAILVR-----AGFQTRAFE 371 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A +PY + + I+ L L + + +++ P + + + Sbjct: 372 EAAIHENVPYRVVGGLKFYERKEIRDIIAYLRLVVNPNDNLAFERIINTP----KRGLGQ 427 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L + + E G +++V Sbjct: 428 ASLNKIYNYSLEEGC---------------------------------------SMFEAV 448 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 +E+ L + L + + Q+ W+ + L + L + E Sbjct: 449 RKLEENEKLKS---TALLTFVKQVRKWQEE-SLNHSLHDLLKKITLESGYISALKEQDET 504 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + +++ ++ I ++ + + Q + VN+ TL Sbjct: 505 RIENVDELFRVIQEFDDAT---------DFLQHVSLLTESDA--QINNSDAVNMMTLHAS 553 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F+ V L G DG +P + + +++R L + A++ L Sbjct: 554 KGLEFEQVFLPGWEDGTFPHVRSLCST------------EQIEEERRLAYVGITRAKRFL 601 Query: 728 YISYIGRSIQDNSER--FPSVLVQELID 753 I+ R + NS + S + EL + Sbjct: 602 TITSAHRRLIRNSWQNTVKSRFMLELAE 629 >UniRef50_D1J8P0 ATP-dependent helicase n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J8P0_MYCHP Length = 745 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 49/502 (9%), Positives = 142/502 (28%), Gaps = 73/502 (14%) Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL 317 + R ++ + +L N VG+P + D Sbjct: 225 ERWKKRFDYILIDEFQDTSILQYRIMQKLANEH-LTIVGDPDQTIYSWRNADI------- 276 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV---NIEEFSRSDNKRPLDPLDSSI 374 + F P+++ ++ + + A + + + +I Sbjct: 277 ---NIIMNFDKDYPNSVTVKLEENYRSTKTILRAANNLISHNKLRLEKKLFTENEEGENI 333 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 F+ + + E + ++ + + ++I ++ A Sbjct: 334 EFYCGFNDEAEARWIATKISELKRN--RVQLKNIAILYRTNS-----CSRAIEEALIKEN 386 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 Y + ++ ++ L + +L +++ P I + L Sbjct: 387 TIYKLFGSIKFYQREEVKDALAYLRVIHDG-SEISLLRIINKP----SRKIGNVTIEKLL 441 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + G+ + H Sbjct: 442 SASKKYN--LGLFEYLETHFNQIQKELH-------------------------------- 467 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 + + + +LA+ + ++ RR + + + +F +E Sbjct: 468 -ISGDTLKNLANFINEIRWARRAIQTNA-IHLTIKELIVNKIKYFDEIKNSEEEYENKID 525 Query: 615 QWQAIIAEGLGAQYGDAV-PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + ++I + + + E+ D++ A V++ T+ + + F Sbjct: 526 NFNSLIEAIAEWEKKNPQGSIDEYLQEITLITDRDVEDD--AASFVSLMTVHNSKGLEFD 583 Query: 674 VVCLLGMNDGVYPRQL-----APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 V + + + ++P + F ++ K + + +++R L A+ A+++L Sbjct: 584 YVFVACLAENIFPLKRAISISPQDDFTFLNSKNFKENIEGLEEERRLAYVAMTRAKKRLM 643 Query: 729 ISYIGRSIQDNSERFPSVLVQE 750 +S+ N + S + E Sbjct: 644 LSFSVGRNGINRK---SRFLSE 662 >UniRef50_C3XD55 ATP-dependent DNA helicase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XD55_9HELI Length = 711 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 48/504 (9%), Positives = 131/504 (25%), Gaps = 71/504 (14%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 + ++ + + ++ + + L + VG+ + + G + Sbjct: 203 NETLRTQISNKYQYIMVDEYQDTNNLQASLLKLLCATHENLCVVGDDDQSIYSWRGANIE 262 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA-VAGVNIEEF--SRSDNKRPLD 368 +L F + + ++ + E +A I + Sbjct: 263 NILD----------FDAQFENTKIVKLEQNYRSTEEILTIANNLISHNTTRYDKILKATR 312 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + + H + E++ + + + ++ + + DI ++ Sbjct: 313 HNGKKVQYIKSHDDKAEMKQIIESIQTLIAQGE--SYNDIAILFRLNTF-----ARHVEE 365 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + + + ++ ++ L L + + + +++ P + + T Sbjct: 366 CFNRTKISFKMVGVIRFYDRQEIKDVLAYLRLALNLDDNFSLERIINQPK-RSIGEKTFG 424 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + W + + + T L L E + Sbjct: 425 DIVAASMHYTSIYAAWKQGGLSSLKCHAKLSEFFTLIESLRECLQLNPSEIPHFFKTKIK 484 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 Y + E Sbjct: 485 LYADDIPT-------------------------------------------KDSESNEDR 501 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 +++ + ++ + GD + + S + V ++ + Sbjct: 502 RKNMDELFATLLDFIECERGGDYASNEEIIQAFLNDIALSSSSDIEDSNHVLCMSVHNSK 561 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + FK V ++GM G++P K + D++R L A A+ L Sbjct: 562 GLEFKHVFVIGMEQGLFPLMNFYEMSIDSVDK----NTQNLDEERRLAYVAFTRAKDTLT 617 Query: 729 ISYIGRSIQDN--SERFPSVLVQE 750 +SY + + E PS + E Sbjct: 618 LSYAKKRMHHGRYREFEPSQFLVE 641 >UniRef50_D2R5I6 UvrD/REP helicase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5I6_9PLAN Length = 800 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 58/551 (10%), Positives = 152/551 (27%), Gaps = 83/551 (15%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV-GNPLLASWGKLGRDYI 311 +P +L R R ++ + L V G+P + +G G + Sbjct: 217 NPEVRRQLDERYRYIMVDEYQDTNLAQYTIVRALSIDHPNLAVTGDPDQSIYGWRGANLS 276 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLD 368 +L F P + ++ + + + A + + + + Sbjct: 277 NILE----------FEKDYPKVKVVRLEQNYRSTKSILHIADQLIRHNIRRKEKDLFTDN 326 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 P + + + + E E + + + + PRD + + Sbjct: 327 PQGNRVRLATFPTQRDEAETIAEEIAHEVRTGK-RRPRDFAIFYRTNA-----LSRQIEH 380 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A ++ +PY I + ++ ++ L L ++ +L +++ P I + Sbjct: 381 ALREQVIPYQIVNGLEFYQRKEIKDVLAYLQLVNNPRSDAALLRIINTP----TRGIGKS 436 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + +++ A + A + Sbjct: 437 TIAKIQE---------------------------------------VARDRAIPLLDAAR 457 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 SGL + +A + L+ G P+EE + + + Sbjct: 458 MAGTISGLAKKSAVAVAKFVAMLD--LIGTKATAPVEELVGYVLTETGYREVLENSEAEE 515 Query: 609 MTLIEQQWQAIIAEGLGAQYGDA--VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + ++ + L + L + + + V + TL Sbjct: 516 DHERLANLEELLTAASEFDLRNPGGAGLEQFLE--DSSLVADTDAFESDSDKVTMMTLHA 573 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F V ++ +G+ P + + + + ++ + + A Q Sbjct: 574 AKGLEFPAVYIVACEEGLLPHERSRRDEEKLEEERRLL------------FVGITRAMQD 621 Query: 727 LYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 L +++ + S + EL + + ++ L+ Sbjct: 622 LTLTWAQYRMFRGQQAPAVASSFLMELPRHEMELIGGNMGRGSAPRYLAWDEESQLSPED 681 Query: 785 TRMPFDPQNYQ 795 + F P+ Sbjct: 682 DDLEFPPREQD 692 >UniRef50_C7MAK0 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=C7MAK0_BRAFD Length = 932 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 68/526 (12%), Positives = 144/526 (27%), Gaps = 47/526 (8%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD---GEQDVGNPLLASWGKLGRD 309 +PA R R ++ + + +L D VG+ + + G Sbjct: 319 NPAIREGYRRRFRHLLVDEYQDTNTAQYQLVRELVGDDPHASLTVVGDSDQSIYAFRGAT 378 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRP 366 ++ F P ++ + +N A ++ E R N Sbjct: 379 IRNIIE----------FEQDFPSARTIVLEQNYRSTQNILAAANSVIEENEGRRKKNLWT 428 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 IT +V Q E + ++ A++ D DI + Sbjct: 429 DQGEGEQITLYVADDEQAEARYIGRQIDALV--DDGRRAGDIAIFYRANAQ-----SRAL 481 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 LPY + ++ I+ L + + ++ +L+VP Sbjct: 482 EDQLIRIGLPYRVVGGTRFYERREIKDAIAYLQVLANPADEINLRRILNVPKRGIGDRAE 541 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES-AQGEWQ 545 + G ++ T+ L + A + Sbjct: 542 AAVAMLAERERIGFGEALRRAEEAPGIATRSLNAVRTFVAMLEDLQQMAADGDGPAELLE 601 Query: 546 SVLP-----YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA-FF 599 ++L + + L +L +++ AQ + D +A Sbjct: 602 AILQRSGYYAELQGSDDPQDESRLENLAELVSVAAEFEAQAEEEDALASEYEDEADAPAT 661 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP--LSLLRDELAQRLDQERISQRFLAG 657 I + D + ++++ D ++I Sbjct: 662 DTPGTEAPETEAPGAPGADIAPDAALTAPDDPEASLVDRFLEKVSLVADADQIPGEEDQ- 720 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V + TL + + F VV L GM DG +P D +++R L Sbjct: 721 FVTLMTLHTAKGLEFPVVFLTGMEDGTFPHNRT------------LSDPEELEEERRLAY 768 Query: 718 EALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYL 761 + A++KL+++ + S + E+ + + Sbjct: 769 VGITRAREKLFLTRAQMRALWGQTQFMPASRFLDEVPESVLDVARA 814 >UniRef50_D2PLA6 UvrD/REP helicase n=2 Tax=Nocardioidaceae RepID=D2PLA6_9ACTO Length = 1079 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 104/829 (12%), Positives = 204/829 (24%), Gaps = 100/829 (12%) Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLFNS--------DGEQDVGNPLLASWGKLGRDYIY 312 +R + ++ + LF VG+P A +G G Sbjct: 279 RSRYKVVLLDEYQDTSVSQRRMLTALFAGPDPEHGRGHPVTAVGDPCQAIYGWRGASVAN 338 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQ--SDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 L + L N + S IL N + + + P Sbjct: 339 -LDEFPEHFRNADGTPARRYVLSVNRRCGSRILAAANEHATELYEQHPGVIPLEAPDGAP 397 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 + +IT + + +E+E + D ++A + P +DI +++ S A Sbjct: 398 EGAITVGLFETRSQEIEWIADSIVAAHKT-PNRRWKDIGILMRTNVDLSAVH-----EAL 451 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 R +P + + P + ++ L + + +L + + R+ I L Sbjct: 452 IARKVPVEVVGLGGLLALPEVVDVVATLQAVNDLTANAAMLRI----LTGPRYRIGHRDL 507 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 L G D +L + L A++ P Sbjct: 508 ALLANRSRALAD--GGDRPAADDLVAALDAAVAGMDSTEVISLAEAVDD---------PG 556 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQE--RPLEEWLPVCRDMLNAFFLPDAETEAA 608 G E + L +L R + + + + PD Sbjct: 557 PAGWGYSPEALERFQELSTELRELRAHAGEPLLDLVRRVISTIGLDVELTATPDHVDSGR 616 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + A+ G L + ++ A V + T + Sbjct: 617 RDHLAAFLDAVGNFVSTESDGSLDGLLAYLAAEEEYAAGLDLAVPSEADSVKLLTTHRSK 676 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPL---------GFDLMSQKPKRGDRSRRD--------- 710 + + VV + + + V+P + L D Sbjct: 677 GLEWPVVFVPTLVNKVFPSDRGRDKWTTNAKVLPWPLRGDADTLPDFHDLSNAGLKAFSD 736 Query: 711 --------DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 ++R L A A++ L + R PS ++ L + G Sbjct: 737 ECKQVNSLEERRLGYVAFTRAKEVLIATGHWWGPTQKRPRGPSAYLEMLKKHAGDRVIAW 796 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQ 822 + +E+ + T P+D + Y+ + + A + +A + Sbjct: 797 APQPELSEENPELAEQ--TQAAWPAPYDAEAYRRRLEGAALVQQARAEGPSAEAEESLLL 854 Query: 823 PLPFTLPETVPLETLQRFW--------AHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL-- 872 T+ L+R L ++ PD L Sbjct: 855 DEQATVAR--WDSELERLLSEARESRSRKAYDVELPRTLSATQVMRLAKDPDGLATELAR 912 Query: 873 -------EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 + + Q L G G + + Sbjct: 913 PMPRKPNRAARFGTRFHAWVESYFGQQF---LLDPDDLPGAADEGIVDDTDLTELMDAFR 969 Query: 926 QLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQP----DGLLRWRPSLLSVAQGMQLW 981 L+ G + G + V DG + ++ Sbjct: 970 --VGPYGEKAPYEIEAPFALSIGGRVVRGRIDAVYQVVRPDGSRGYDVVDWKTSRSETAD 1027 Query: 982 LEHLVYCA----------SGGNGESRLFLRKDGEWRFPPLAAEQALHYL 1020 L G + ++R R L +Q L L Sbjct: 1028 PLQLAIYRVAWAELLGIPLTQVGAAFYYVRTGDIVRPDNLPTKQELVTL 1076 >UniRef50_A2QP78 Contig An07c0280, complete genome n=8 Tax=Trichocomaceae RepID=A2QP78_ASPNC Length = 1003 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 75/670 (11%), Positives = 172/670 (25%), Gaps = 66/670 (9%) Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 + +R ++ L P +R+ + P L A + F Sbjct: 113 ADSGDSLAIIKRIVKRL-QVGIQPNAARARISHQKAHGVSPDELAAKLNKNSKVLEQREF 171 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQ----------------RRHSFEDRELPLFRDSENAG 284 R Y ++ L + ++ + E Sbjct: 172 VQVYREYEANLAASNLLDYDDLLVRCVELLRKHPQCVSNVQAVLVDEFQDTNHIQYELMN 231 Query: 285 QLF-NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL 343 + VG+P + +G + L + D + ++ + Sbjct: 232 LFASQNQRITVVGDPDQSIYGFRSAEIKNL----------GRMQQLYKDTSIVLLEDNYR 281 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPL---DSSITFHVCHSPQREVEVLHDRLLAMLE-E 399 + ++ E S + L P + + + E + + + Sbjct: 282 SSGCILSSAQDVIEQDSSRPAKKLQPTHSLGTMPVLRKLPNSESEALWIVLEIKRCIALT 341 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 + D +++ + + +PY + ++ + L Sbjct: 342 GKLVNYSDFAILLRSAA-----LSRQIEAQMGKHGIPYRMVGGLRFFDRVEIKLLLDYLR 396 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + ++ +L +++VP + +E + L + ++ D ++++ + Sbjct: 397 VISQPGNTDALLRIINVP----SRKLGDESVNLLTKGAEKAKKPL---WDFIKDVAQGRS 449 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 L + + Q + + S L + L + + L Sbjct: 450 STEKSLSKPADNGLCTLVGLIESARQKLCECTDGSSPRKLLDFLIKKL--SFREYLKALH 507 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 W V + A P E EA + Q + + Sbjct: 508 GSNEENRWANVEELLTQADDTPGPENEAENDENLPEIQGLEQQQAHPGEEALSRFLANVA 567 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 + L QE V I T+ + + + VV + + +G+ P A Sbjct: 568 LSTEVLPQEGEEGEQSDEKVTISTIHAAKGLEWPVVFVPAVLNGIIPHSRAEDS------ 621 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 D++R L A+ AQ LY+SY R +D E S + + + Sbjct: 622 ----------DEERRLLYVAMTRAQALLYLSYPLRQSRDGEEATLSSFLP--SKLVEERF 669 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 G + + + L + + + Sbjct: 670 RFLGPKINDKI--IQEIADILRRPMPGSAAISEGRSTCDIPYDDQWTEDGFEAPDAIIRW 727 Query: 820 FVQPLPFTLP 829 P Sbjct: 728 DGTRAMGGEP 737 >UniRef50_C7QE44 UvrD/REP helicase n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QE44_CATAD Length = 1134 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 122/952 (12%), Positives = 231/952 (24%), Gaps = 117/952 (12%) Query: 152 GHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPS-- 209 G LGE W L AL A + + P L Sbjct: 155 GIGGGALGERIQWPQDLRAALAT---------RGFAEELRTVLARARELGLDPTELAQAA 205 Query: 210 ----RVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQR 265 R SA YL L G L+ D++ L R Sbjct: 206 RRADRGDWYAASAFFEEYLDVLDVQGVLDYGELVHRAVLLAGQEDVRRE-----LRHDFR 260 Query: 266 RHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELD 324 ++ + L + G+P + + G D +L E+ + +D Sbjct: 261 AVFVDEYQDTDPSQVRLLQALAGDGADLVVFGDPDQSIYQFRGADVRGILDFPEAFRRMD 320 Query: 325 AFVDVTP---------DNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD---S 372 T LL + + + + E + P+ + Sbjct: 321 GSPADTAVLRTSRRCGPALLKASRDLTRRMPIPLLPTEKVREHRDLAAEGPVADGEPIEG 380 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 S+ +P E++ + D + ED + +I V+V P ++ A Sbjct: 381 SVQVFTFPTPNTELDNIVDMVRRAHLED-GVPWDEIAVLVRSATRSIPALRR----ALIA 435 Query: 433 RYLPYAISDRR-ARQSHPVLEAFISLLSLPDSR--FVSEDVLALLDVPVLAARFDITEEG 489 +P S + P + + L + D+ + ALL P+ + Sbjct: 436 AGVPVDTSGDELPLAAEPAVAVLLQALRVADNEAALTPDVARALLSGPLGGMDAFELRKL 495 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF----GLTRMLLGYAMESAQGEWQ 545 R LR + +P + T + +LL A+ Sbjct: 496 ARALRAEERAANQNGVRGVPAEHSAVVPELARITEPSVNGVRPSEVLLREALAEPARLVA 555 Query: 546 SVLPYDESSGLIAELVGHLASLLM-------QLNIWRR---GLAQERPLEEWLPVCRDML 595 E + + L+ +L L W Sbjct: 556 MDEDVAEPARRLGMLLLRTRQILRGGGSVERALWELWSGGGDERDRNRAHRWPERLERTA 615 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 + + + + A + + +Q Sbjct: 616 QRGGNTGRAADRDLDAVCVLFDYAARAEDRATGRGVRNFIADLEA-QELAGDSMAAQSSR 674 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR------- 708 G V + + + + ++ V + G+ DG++P + G RS Sbjct: 675 GGAVRLMSAHKSKGLQWRFVIVAGVQDGLWPDLRLRGSLLQADLIGRNGLRSMEEIPTAS 734 Query: 709 --RDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGD 764 ++R LF A A+++L ++ + ++ + PS V EL + L Sbjct: 735 TLLAEERRLFYVAATRARERLVVTAVDSALIGDDAAAEAPSRFVYELGVEVQPLPGLR-K 793 Query: 765 EALNCDESEARVKAHLTCLHTRMPF----------DPQNYQPGERQSYAREWLPAASQAG 814 AL A ++ LT + R Sbjct: 794 RALAIPALVADLRRVLTDPKSSDQLRQAAAERLARLADAQAGDGRPLVPSAHPDKWWGLV 853 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 + + P + + +R F + + Sbjct: 854 EETASEQPVRDPAKPLLLSASQVAAIDECSLRWFLDHEAAAHEQKTV------------A 901 Query: 875 LSRYQINQQLLNALVEQDDAERL------FRRFRAAGDLPYGAFGEIFWETQCQEMQQLA 928 L + L + + + D RL R E +++ Sbjct: 902 LGFGNVVHVLADEVAKGDTPARLDVLMERLDRVWDRLSFEAQWQSPQQKEEARAALERFL 961 Query: 929 DRV---IACRQPGQSMEIDLACN------------GVQITGWLPQVQPDGLLRWRPSLLS 973 E D+ N ++I G +V+ D Sbjct: 962 AWHVTDRGRLLHSSEQEFDVRLNVGAGDSEDGEGFDLRIRGSFDRVETDEAGLVYVVDFK 1021 Query: 974 VAQ------GMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHY 1019 + Q + VY G + + G L A Sbjct: 1022 TGKNVPTKNEAQEHPQLAVYQLVVREGAIQGVSNESGGAELVFLREGDAAGL 1073 >UniRef50_UPI000050F875 UvrD/REP helicase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F875 Length = 1061 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 92/822 (11%), Positives = 210/822 (25%), Gaps = 94/822 (11%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 PA R + ++ + + LF+S VG+P A +G G + Sbjct: 260 PAARRAEQHRWKIVLLDEFQDTSVAQLKLLRDLFHSTAVTAVGDPRQAIYGWRGASADNM 319 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS 373 + ++++ + IL + NR G+ + + D + Sbjct: 320 IRFSSDFHDVESLT----LSTSWRNDHRILTVANRTANGLAGSRETPLSARTGAGEGDVA 375 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I + V L + P V+ ++P A Sbjct: 376 IDISSGAHDPDFLTVGLRSLTEWVASLPDG--SSTAVLCRKRAHFAPVAA-----ALETA 428 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 + S P + ++L+ + ++ L+ +L + Sbjct: 429 GYAVHVHGSSGLLSDPFVADLRAVLTAAVDPMAGDSLMRLISGRLLGLGATDIAALQSFT 488 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R+ + + +D + Q T GL ++ + S ++ + Sbjct: 489 RRQNDSRVTEFLGEDPENSGVVPENIDQATIVEGLDELVDLFEALSGSAKFPGARAMVSN 548 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 L L+ R + + + +++ L Sbjct: 549 FRNSGLSELALKRLVRLAQALRHVRSGSGTIASIIRTAMTETGVDTDIWGLSDSLRNLHR 608 Query: 614 QQWQAIIAEGLGAQ-YGDAVPLSLLRDELAQRLDQERISQRFL---AGPVNICTLMPMRS 669 + ++ D + + L+ +++ +S A ++I T+ + Sbjct: 609 SAIDSFLSAASQYSAADDQPSVPGFLEWLSLMEEKDALSVAEPNSAAEAIDIMTVHASKG 668 Query: 670 IPFKVVCLLGMNDGVYPRQLAPL---------GFDLMSQKPKRGD--------------- 705 + F V + + +P + L + D Sbjct: 669 LEFDAVAVPSLVVKDFPTSPRDPEGWMERTALPYPLRGDRAHLVDYDLRTADFDTKKALD 728 Query: 706 ------------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 + +++R L A A+ L++ + N PS + E I+ Sbjct: 729 EWVNEFIKPAIADAHEEEERRLAYVAFTRAKHHLWLGAELMGARAN-PDEPSPFLMEAIE 787 Query: 754 YIGQSHYLPGDEALNCDESEAR-----VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP 808 + +P + ++ + L R P A++ P Sbjct: 788 ELNLDVDMPEPADESAEDRVETSVWPVPRTALVSTARRAAEWVSRAAPTGLSELAQKPTP 847 Query: 809 AASQAGKAHS---EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 A +A + +P+ + L + P F + L+ Sbjct: 848 VGQYARQALRISSRPEREGTGAVPDRLSATALVSWRRDPND-FMKQTLRPVPSPPS---- 902 Query: 866 DTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 + Q + + E Q Sbjct: 903 -------RAAEIGTTFHSWVEQHFGQASIDIEDEQQVR-------PIDTATIERLQQTF- 947 Query: 926 QLADRVIACRQPGQSMEIDLACNGVQITGWLPQV----QPDGLLRWRPSLLSVAQGMQLW 981 + + M +L ++ G + V ++ W+ S L + +++ Sbjct: 948 -IGSEFASRHADHIEMSFELVLGRFRVPGKIDAVFITGDHAEVVDWKTSKLPEEKTLEVM 1006 Query: 982 LEHLVYCASGGNGE---------SRLFLRKDGEWRFPPLAAE 1014 L + F+ D RF L E Sbjct: 1007 KWQLALYRFAIQRVHPEITEVTGTFYFVGSDDIVRFTHLPEE 1048 >UniRef50_Q2STJ5 ATP-dependent DNA helicase Rep n=90 Tax=Bacteria RepID=Q2STJ5_BURTA Length = 848 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 70/567 (12%), Positives = 149/567 (26%), Gaps = 68/567 (11%) Query: 191 QRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGD 250 + + + L R ++ L L + P Sbjct: 314 EEAMTIAANEDEHQAALVYRNYVA---TLHAYQAVDFDDLIRLPTELFAKNEP------- 363 Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRD 309 + R R ++ + E L VG+ A +G G Sbjct: 364 -----VRDRWQNRLRYLLIDEYQDTNACQYELLKLLAGPRAAFTAVGDDDQAIYGWRGAT 418 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA-VAGVNIEEFSRSDNKRPLD 368 L P + ++ + A I + K+ Sbjct: 419 LENLAQLG----------KDFPKLHVIKLEQNYRSTVRILTAANNVIANNPKLFEKKLWS 468 Query: 369 PLD--SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 SIT C+ + E E + RL + + + RD ++ F +F Sbjct: 469 EHGMGDSITVTPCNDEEHEAESVVFRL-SAHKFERRTQFRDYAILYR-----GNFQARIF 522 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 +PY +S ++ ++ + L L + + + P R I Sbjct: 523 EQVLRRERIPYVLSGGQSFFDKAEIKDLCAYLRLIANADDDPAFIRAVTTP----RRGIG 578 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 L L + ++ + + + + + + + Sbjct: 579 NTTLEALGAFAGQAKVS------LFEAVYMGGIEARLSARQIEPLRIFCDFIQRLTDRAD 632 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 P + E + + A L + + + LE + R + E Sbjct: 633 KEPATVVLDDMMEAIHYEAYLYDAYDERQAQTKWQNVLEFLEWLKRKGTKPEPDEAVDGE 692 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 A L L + L + V + T+ Sbjct: 693 AEGFHNADGLA-----------DTGKNLLGLIQTV--ALMSMLEGKEEDPDAVRLSTVHA 739 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + + V L+G+ +G+ P D R +++R L A+ AQ+ Sbjct: 740 SKGLEYPHVFLVGVEEGIMPHSGGSDDG--------PIDDERIEEERRLMYVAITRAQRS 791 Query: 727 LYISYIGRSIQDNSERFP--SVLVQEL 751 L++++ + + S + E+ Sbjct: 792 LHLNWCKKRKRARETIVCEQSRFIAEM 818 >UniRef50_P45612 Probable DNA helicase II homolog n=4 Tax=Mollicutes RepID=UVRD_MYCCT Length = 722 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 53/512 (10%), Positives = 140/512 (27%), Gaps = 81/512 (15%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDY 310 ++ L K ++ + L + VG+P + G Sbjct: 207 QNNEILNKWRNAYDYVLVDEFQDTNELQFSLIKFLTINTNHLTVVGDPDQTIYSWRGAKL 266 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPL 367 +L+ F + + + + + + + Sbjct: 267 DIILN----------FNKTYSNAISIVLNQNYRSTKQILDISNSFIKNNKFREHKEIFTN 316 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + + C+S E + ++ ++++ +DI ++ F Sbjct: 317 NKSGKKVVLKECNSKTSEASYVSSKIKELVKQ--GYHYKDIFILYRMNAW-----SQEFE 369 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A++ +P+ + + V++ ++ L + + L +P + Sbjct: 370 KELANKKIPFQLIGGIKFRERKVIKDAMAFLKMISIKDNLSSQRVLGLIPKI------GN 423 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + + L + LL ++ + Sbjct: 424 ITIEKIINTA-----------------NLNHLNIFDLITNEDKTLLHSITKNLDELIEVF 466 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + + E L+ L + + Sbjct: 467 KTAHQL--------------------YLDNTNIEEILKYLLIQSGYENKLKIRKEQDDLE 506 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + + Q + + Y + L L + I + V++ T+ Sbjct: 507 NINALYDQLKRFDEDFDPKYYSEENKLIAF---LQEEALTSDIDEAEQIDKVSLLTVHAA 563 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + KVV + G+N G++P +++ + +++R AL A+ +L Sbjct: 564 KGLENKVVFITGLNQGIFPSRISETSIN------------ELEEERRALYVALTRAKDEL 611 Query: 728 YISYIGRSIQD--NSERFPSVLVQELIDYIGQ 757 +++Y+ SE PS + EL + + Sbjct: 612 FLTYVKGDYSHIMQSELKPSKFIHELDKDLYE 643 >UniRef50_A6VEA1 ATP-dependent DNA helicase Rep n=102 Tax=Proteobacteria RepID=A6VEA1_PSEA7 Length = 706 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 63/540 (11%), Positives = 144/540 (26%), Gaps = 83/540 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIY 312 P L K R R ++ + L + VG+ + + G Sbjct: 235 PDILQKWQNRVRYMLVDEYQDTNASQYLLVKLLVKDRAQFTVVGDDDQSIYAWRGARPEN 294 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS---RSDNKRPLDP 369 L+ + P + ++ + + + Sbjct: 295 LMQ----------LKEDFPSLKVVMLEQNYRSTSRILKCANVLIANNPHVFEKQLWSEMG 344 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 I C + E E + +L + + ++ + Sbjct: 345 HGDPIRVIRCRNEDAEAERIAMEILTLHLRTE-RPYSEFAILYR-----GNHQAKLMELK 398 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY +S + ++ +S L + L +++VP R +I Sbjct: 399 LQHHQIPYRLSGGTSFFGRQEVKDLMSYFRLLVNPDDDNAFLRVINVP----RREIGSAT 454 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L L + + I + + Sbjct: 455 LEKLGNYATQRNI---------------------------------------SMYAACDE 475 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV-----CRDMLNAFFLPDAE 604 + L + L ++ RR A+ P+ + + L D Sbjct: 476 MGLAEHLDSRFHERLQRFKRWMDGIRRQCAENEPIAVLRSMVMDIDYENWLRQNASSDKV 535 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 E M+ + +A+ + GD + + + + + + + A V + TL Sbjct: 536 AEFRMSNVWFLIEALKNTLERDEEGDMTIEQAIAKLVLRDMLERQQEEEEGAEGVQMMTL 595 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + + F V ++GM + + P + + + +++R L + A+ Sbjct: 596 HASKGLEFPYVFIMGMEEEILPHRSSI-------------EADTVEEERRLAYVGITRAR 642 Query: 725 QKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 Q L +++ + Q + PS + EL + L A + Sbjct: 643 QNLAMTFAAKRKQYGEIIDCSPSRFLDELPPEDLEWEGLEDAPQEVKAAKGNAALADIRA 702 >UniRef50_D2R6Z4 UvrD/REP helicase n=4 Tax=Planctomycetaceae RepID=D2R6Z4_9PLAN Length = 669 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 60/531 (11%), Positives = 145/531 (27%), Gaps = 70/531 (13%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDY 310 P + + ++ + L + VG+ + +G G + Sbjct: 198 IAPQVRQQEARQFDHLLVDEYQDTNGLQYRIIRALADEHRNICVVGDDDQSIYGWRGAEV 257 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPL 367 ++L F + PD + ++ + + + + Sbjct: 258 KHILQ----------FKNDWPDAKVVRLEWNYRSTSAILETANKLIAYNKHRHDKVLKAA 307 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 S E + + L++ T PRD ++ + Sbjct: 308 RAGGERPRIEQYPSEVEEARQVVADIAFRLKDG-TRDPRDFAILFRTNEQ-----PRAIE 361 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + LPY + ++ + ++ L +S +L +++ P Sbjct: 362 TELRKAKLPYVMLGSQSFFDRKEVRDLLAYLRAIESPRDEVSMLRIINTPP--------- 412 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 R + L T ++ + G + Sbjct: 413 ---------------RGIGERSVETVLSEAVRSGKTVWDVVSNLSEGPTLFGDAE----- 452 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPDAET 605 +++ L + V + S + + A+ L E Sbjct: 453 ----KTTTLSDKNVAAIRSFSNLIQRYSEATARGDSLAELTRKLISETGYEQEVRRIYPD 508 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVP-LSLLRDELAQRLDQERISQRF--LAGPVNIC 662 + + ++ + + P +S D++ + + + + Sbjct: 509 PEEQQMRLAAVEEVVNSVAAYEAEEEKPSISGYLDQVTLGQREMGDDKEKQLARNAIALM 568 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 TL + + F V ++G+ DG+ P + K + + D++R L + Sbjct: 569 TLHASKGLEFPHVYMIGLEDGILPHSRSV----------KADSQDQIDEERRLCYVGITR 618 Query: 723 AQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDE 771 AQ++L +S ++ R PS + E+I H G + Sbjct: 619 AQERLTLSLALTRMKWGKPRDTTPSRFLFEIIGQADNPHSRGGTRPRSSSR 669 >UniRef50_Q029V8 ATP-dependent DNA helicase, Rep family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q029V8_SOLUE Length = 788 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 63/588 (10%), Positives = 146/588 (24%), Gaps = 86/588 (14%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 D A R ++ + E L VG+ + + G D Sbjct: 209 DDATRESWNRRLSYVMIDEYQDTNRSQYELMRLLTEQHQNVCVVGDEDQSIYSWRGADIK 268 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLD 368 +L F P ++ + +N A + E + Sbjct: 269 NILD----------FEKDYPRAKTIRLEQNYRSTKNILAAAGAVVENNKARKGKKLWTES 318 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + + + + E + D L +P + ++ Sbjct: 319 DSGELLGLYAGYDSENEALFIADTTEKYLASNPG---DHVAILYRTNSQ-----SRQIEE 370 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A Y + + ++ ++ L L S S ++ +++ P I Sbjct: 371 ALRRYGRKYNVVGGFSFYQRAEIKDMVAYLKLASSNVDSVSLMRVINTPA----RGIGRT 426 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + + ++ + G W+S+ Sbjct: 427 TVEQIERYGRDHG---------------------------------------LNLWESIE 447 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + L L + + L + + + + E Sbjct: 448 RIIDDQQLSTRSQSSLVVFRNLIQELSLVASTS-SLPDLIRHILERTGYRKMLQQEKTPE 506 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + +I A L D A D + ++ V + TL + Sbjct: 507 SETRLENLDELINAAADAHERGET-LGDFLDNAALVADVDSYDEQSP---VTLMTLHNAK 562 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F +V L GM G++P + + + ++ + + A++KL Sbjct: 563 GLEFPLVFLSGMELGLFPHSRSMNSEEALEEERRL------------CYVGMTRARKKLV 610 Query: 729 ISYIGRSIQDN----SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 +++ + S + E+ + + + + SE + Sbjct: 611 LTWAKMRRRFGGGEQERSTASWFLSEVPENLIFNLGPRDEPGEVDLYSERYDVRQSARRN 670 Query: 785 TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV 832 T + + R Q+ A + P P + Sbjct: 671 TYTGKTYNSLDNISQFFGERGLPFKPGQSAPAPPKPDLRTPPQYPRPI 718 >UniRef50_Q6MFN4 Related to ATP-dependent DNA helicase n=7 Tax=Sordariomycetes RepID=Q6MFN4_NEUCR Length = 1105 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 70/541 (12%), Positives = 156/541 (28%), Gaps = 57/541 (10%) Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLT----RQRRHSFEDRELPLFRDSENAGQLFNSD-G 291 L + Y + L + + ++ + E L Sbjct: 189 THLERSNLLDYDDLLVRCVELLRKFPSCVSNIQTVLIDEYQDTNGVQYELMRLLAQKHQR 248 Query: 292 EQDVGNPLLASWGKLGRDYIYL---LSDLESSQELDAFVDVTPDNLLHNIQSDILELENR 348 VG+P + +G + L L D + E+ + IL+L Sbjct: 249 ITIVGDPDQSIYGWRSAEIKNLWRLLRDYPKTDEISLEENYRSS-------QAILDLSLL 301 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA-MLEEDPTLTPRD 407 + + +P+ S + E E + + +L LT D Sbjct: 302 VIQQD---KKRYQKVLKPVHDRGSRPVLRKLKNASTEAEWIVAEIRRALLMSGSMLTHND 358 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 + V++ + SA +PY + ++ + L + + Sbjct: 359 VAVLLRSAS-----LSRHVESALGKAGIPYRMVGGFKFYERSEIKTILDYLRVIHQPDNN 413 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 + +++VP + I + ++ L + +S + + V+ T + Sbjct: 414 DAFGRIMNVP----KRGIGDGTIKNLIEEAEKSSLS--LYSLLVKHCRGDRTAKTKITKH 467 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER-PLEE 586 + + G + G + + ES+ L L+ L + + Sbjct: 468 AEQKISGELIRMLNGIRKKMEEAAESNP------FGLVDLIEHLLTALNFQNYLQVTYPD 521 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 + F + + + + A+ Q + L ++ D Sbjct: 522 DHEQRWANVQEFISLANDFVRDLHVSGE--DALPEIEGLEQSKEEEVLPQFLANVSLASD 579 Query: 647 QERISQRFLAGP-VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 ++ + P V I T+ + + + +V + + +G P + G Sbjct: 580 AQKGEEGQENKPLVTISTIHAAKGLEWPIVFIPAVYNGSIPHMRSEDG------------ 627 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIG-RSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 D++R L A+ AQ LY+SY S + S V + + + Sbjct: 628 ----DEERRLLYVAMTRAQSLLYLSYPVYHSPGSSERTEMSSFVSPVANSFAKKGPTFER 683 Query: 765 E 765 Sbjct: 684 P 684 >UniRef50_Q30TG3 UvrD/REP helicase n=8 Tax=Epsilonproteobacteria RepID=Q30TG3_SULDN Length = 682 Score = 209 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 51/565 (9%), Positives = 152/565 (26%), Gaps = 90/565 (15%) Query: 194 IETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKD 253 I +++ P + + +Y + L ++ + + D ++ Sbjct: 137 ISRYKNSLLTPDDAYKQAEFFNYQQIAKIYEEYENYLLENNLVDFDDLIALTFKLLD-EN 195 Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIY 312 P + R ++ + + +L ++ VG+ + +G G Sbjct: 196 PELARTTSDKYRYIMVDEYQDTNELQLKLLQKLCSTHNNICVVGDDDQSIYGWRGAHIRN 255 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDP 369 ++ F + ++ + E A A + P Sbjct: 256 IME----------FDQDFIGTSVFKLEENYRSREPILKVANALIEHNRSRLGKKLIPTRG 305 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 IT E + ++ +L D + DI V+ + Sbjct: 306 GGEDITILNSSDENEEARKIATKVNKLL--DSGVKAEDIAVLYR-----VNVLSRSIEDG 358 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + Y + ++ IS L + + +++ P + + + Sbjct: 359 LNRAGIAYKLVGGLRFYDRAEIKDLISYLRVITNFHDDFSFKRIVNKP----KRGMGKAS 414 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + + + + + + Sbjct: 415 VDKIELAAHANETS------------------------------------IFEYIEKIAI 438 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN--AFFLPDAETEA 607 D + + ++ L + + + ++ + D + + + Sbjct: 439 TDLETLVKSKNAKTLKKFVKDIRSVANAA--KESTYNFIDILEDTFHLKDIYKGLPDEVE 496 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + +++ + + L +EL + +Q+++ + + ++ Sbjct: 497 RVLNMDEFYGLFRDFIKN---SPSASLDEFLNELTLQSEQDQV----EGDSIYMMSIHAS 549 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F + ++G+ +G P GD S +++R L + A+ L Sbjct: 550 KGLEFDHIFIIGLEEGFLP---------------LVGDGSDLEEERRLGYVSFTRAKDTL 594 Query: 728 YISYIGRSIQDNS--ERFPSVLVQE 750 +S++ + S E Sbjct: 595 TLSHVDSRFYKGRRSDLQKSRFFNE 619 >UniRef50_UPI00016C5306 ATP-dependent DNA helicase n=2 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5306 Length = 755 Score = 209 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 61/512 (11%), Positives = 151/512 (29%), Gaps = 82/512 (16%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDY 310 ++ A+L +R R ++ + + QL ++ VG+P + + G D Sbjct: 201 QNEELRAELDSRFRYIMIDEYQDTNSAQYQIVKQLSINNPNVCVVGDPDQSIYKWRGSDI 260 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAG---VNIEEFSRSDNKRPL 367 +L F P+ + + ++ A ++ + + + Sbjct: 261 KIILD----------FERDFPNARTITLAQNYRSTKSIIRAASVLIDHNKQRKKKDLVTD 310 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 +P + + E E + R+ ++ T RD + + + Sbjct: 311 NPQGEPVNVITFDNGLDEAEGVVVRIKEAVKAG-TFKYRDHAIFMR-----INALTRSLE 364 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 SA +P+ I A ++ L L + L +++ P I + Sbjct: 365 SAFVKHGVPFQIVKGLAFFERKENRDVLAYLRLLTNPHDGVSFLRVVNAPA----RGIGK 420 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L L+ +A G + Sbjct: 421 VSLDKLQ---------------------------------------SFAASQEIGLLAAA 441 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + + + + L + R + ++P E + + D + T+ Sbjct: 442 GQIAKITEIKGKAATGLRDFHRLMTDLRSKM--DQPPHELVRLVLDKSGYEAMLRDSTDE 499 Query: 608 AMTLIEQQWQAIIAEGLGA-QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 ++ ++ ++ +++ D + ++ A V++ TL Sbjct: 500 EDADRLANVSELVTAAKQFWDEDNSRTITDFLEQITLASDTDGWDEQ--ADHVSVMTLHA 557 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F V +L + G+ P + + +++R L + A ++ Sbjct: 558 SKGLEFPAVYILAVEQGLLPH------------ERSLANDEEIEEERRLCFVGMTRAMKE 605 Query: 727 LYISYIGRSIQDNSERF--PSVLVQELIDYIG 756 LY+ + + S +QEL + Sbjct: 606 LYLCHARMREFRGQLNYCIVSQFIQELPRDVR 637 >UniRef50_Q88U40 ATP-dependent helicase/deoxyribonuclease subunit B n=3 Tax=Lactobacillus plantarum RepID=ADDB_LACPL Length = 1201 Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats. Identities = 131/1121 (11%), Positives = 276/1121 (24%), Gaps = 213/1121 (19%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMF 73 M + + P + LV + I + + + Sbjct: 16 RRTMVAQLVATLMAKPQDQFFYLVPNH---------------IKFDTEVDVLNRLAQAFG 60 Query: 74 VRVLPEIPKESAFNKQSMSWKLMT-----LLPQLLEREDFTLLRHYLTDDSDKRKLFQ-- 126 L + F+ ++W LM +P+L LL L +D+ +LF Sbjct: 61 QPDLYAQTQVQVFSFTRLAWYLMKNEAAYQVPRLSAAGIDMLLYRILQRHADELRLFGGE 120 Query: 127 -----LSSKAADLFDQYLVY--RPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 ++ A ++ +P+ + Q L A ++K V T Sbjct: 121 ISQTGFVTQLAREINELQTANLQPEDVVQLAANAQAGDLQAKLHDLAIVYKDFVAATADK 180 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 ++ + T V + G + LP + + Sbjct: 181 YLKPADILVQLNAYLRRQDLHGTHV-----YVELAGFAQLPAQEQGI---------VTTM 226 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 + D + + R Q+ S Sbjct: 227 LEQGADVTISLMLDHKVVDRAPENGTLFYQSGRLYYRLYQYARIRQIPVS---------- 276 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 + + R LD F P + + Sbjct: 277 QDIYAETPR-------VAPGLVALDDFWRGQPQAATGYEEPNT----------------- 312 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED-----PTLTPRDIIVMVAD 414 ++ S Q E+ + + AM+ + RD ++M Sbjct: 313 -------------NVHLFRTDSRQTELAQVGRMIRAMVAKKHADPADDYHYRDFLIMTRH 359 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 +D+Y + F +PY + +R+ HP++E +L + ++ DV+ +L Sbjct: 360 LDAYQTMLAPTFHEL----EIPYFVDLQRSMADHPLVELINALFDIDAQQYQYRDVMRVL 415 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH----TWRFGLTR 530 +L + + RQ V+ + + + Q+ G+ Sbjct: 416 KTELLMPNINGQPMDRQAYRQAVDLTENFILKSGYHGQRWVQREDWQYFQLTEGDAGVET 475 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 V + + L + L W Sbjct: 476 DQNAEISRQINLIHHFVAETLPPFFKKMRQAPDGKAAVTLLVNFLTSQGVTDQLLAWRD- 534 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 A D A Q + ++ E + + ++ L + Sbjct: 535 -----QALDRQDVRAAAEPEQTWQTFCGMLDEYVTILGAEPFEITDFLALLQAGFEGASY 589 Query: 651 SQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS-- 707 SQ V I ++S KVV ++G D V P ++ K Sbjct: 590 SQIPSTLDQVLISESGMVQSQDHKVVFMVGATDLVMPDRIMTNNLLSDVDKENLQLTLSS 649 Query: 708 -------------RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 + D+ L A +SA++ L+ S + Q+ ++ S V+ + Sbjct: 650 LDGDHYLNDSAVVQLGDESCLNYLAFLSARRHLFFSAPLKDDQE-TDLNWSNYVRRIQRQ 708 Query: 755 IGQSHYLPGDEALNCDESEAR----------------------------VKAHLTCLHTR 786 + + V A L Sbjct: 709 FNLREHTYLGTPDPTNADARPFVGTKRRTISHVIQVYRDVLTTNTDRNRVGAPLQPAPVW 768 Query: 787 MPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP--LETLQRFWAHP 844 + Q + + AR+ + S + + + + L+ F+ + Sbjct: 769 VWLRQQLTRDPQFGELARQLMAGLSYRNQPVKLTPASVEALYGHQIYTSISKLEEFYRNQ 828 Query: 845 VRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL------- 897 F + L++ R F L S + +L+ L++ ++++ Sbjct: 829 YAYFLKYGLKLRERDV---------FELSAASTGEFFHAVLDGLIKALRSDQIPLAQASD 879 Query: 898 -----------------FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQS 940 + T Q + ++ + Sbjct: 880 QQLGQYLETVTRQILDQPQFTILTSSNRMAYLQRQLINTVRQIAFAIRNQSKLSAAEPKQ 939 Query: 941 MEI--------------DLACN---GVQITGWLPQVQPDG---LLRWRPSLLSVAQGMQL 980 EI D + V + G + ++ +Q Sbjct: 940 TEILFGNVGKEHGLKALDFQIDATHSVHVRGKIDRLDQIQVADQSYLGIVDYKSSQHKFD 999 Query: 981 WLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLS 1021 + E A L + + ++QA L+ Sbjct: 1000 FQEAYYGLAMQMLTYLDAVLHNEQAL----VGSDQAAVKLA 1036 >UniRef50_C2L0R7 ATP-dependent DNA helicase PcrA n=1 Tax=Oribacterium sinus F0268 RepID=C2L0R7_9FIRM Length = 793 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 89/694 (12%), Positives = 198/694 (28%), Gaps = 134/694 (19%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEA----------QAW--------QAPL 168 L+ + A L + + LA T + + + + W L Sbjct: 36 LTHRIAYLILEKGISPYQILAITFTNKAAQEMRDRVNQLLPERQGEIWVSTFHSMCLRIL 95 Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQA-- 226 + + + + + + + L R+ + +S + Sbjct: 96 RREIGNLGYDSDFSIYDTDDQKTVMRQVFKELQIDSKMLKERLVLSALSQVKNQGRSVSD 155 Query: 227 -------------LQALGKHIEIHLLFTNP---------CRYYWGDIKDPAYLAKLLTRQ 264 ++A + E L N C+ + PA L K R Sbjct: 156 YLLEDPEDFLDGKIRACIRLYEEKLKQNNALDFDDLLLRCKELFEKF--PAVLEKYQERF 213 Query: 265 RRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQEL 323 R ++ + L VG+ + + G + +LS Sbjct: 214 RYILVDEYQDTNDVQFHLVYLLAKKYQNICVVGDDDQSIYRFRGANVENILS-------- 265 Query: 324 DAFVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCH 380 F P+ + ++ + A + + + + ++F Sbjct: 266 --FESHFPNCKVVKLEQNYRSTAPILDLANVVIAENQHRKQKKLWTAEKEGLKVSFQEYE 323 Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 S + E + + D + +D V+ + +PY I Sbjct: 324 SAKEEAAAVIRGIR-----DAGWSYKDQAVLYRTNAQ-----SRLLEEQCIHWNIPYQIV 373 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 ++ +S + + ++ + +++VP + I E L L+Q+ Sbjct: 374 GGVNFYQRKEIKDILSYMKILVNKKDDVALRRIINVP----KRGIGEASLLKLQQYGESL 429 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 G ++ LP+ +++GL + Sbjct: 430 GGFSLVES---------------------------------------LPFAKAAGLSGKA 450 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 + + S L W+ L + AE + Q + Sbjct: 451 LSMVGSFQEMLESWKDVE-----LSALIDRILQDTEYEKDLQAEGAIEAESRMENIQELQ 505 Query: 621 AEGLGA--QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + + GD LS +E++ D +R + + TL + + F VV L+ Sbjct: 506 GKLQSYIEENGDEGSLSAFLEEVSLLSDLDRSDLTE--DKITLMTLHGAKGLEFPVVYLV 563 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 G+N+G++P + R+++R LF + A+++LY++ + Sbjct: 564 GLNEGLFPSAQSMF------------TPEEREEERRLFYVGITRAEKELYLTAGRDRVVH 611 Query: 739 N--SERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 S V ++ + + YL + D Sbjct: 612 GQYQSMLVSSFVDDVPEEHLEKKYLYRKKPSEED 645 >UniRef50_O26572 DNA helicase II n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26572_METTH Length = 916 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 97/887 (10%), Positives = 201/887 (22%), Gaps = 150/887 (16%) Query: 147 AQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPG 206 + E G E L E Q + + + + F P Sbjct: 105 EEHEFGAGFEILDEES--QLIFLRTVFYKIGLDRYMKMGEVHRAIEFFNRCTENCIEPEE 162 Query: 207 L--------PSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLA 258 L P R GI+ YL+ L+ K Y L Sbjct: 163 LINALRRKYPDREEYQGIAVCYARYLELLREQKKID----FPGLEKEVYLLLNSSERVLE 218 Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDL 317 + + R ++ + ++ + VG+ + +G G + Sbjct: 219 SVRKKYRYIMIDEYQDTSPIQELILREIAGKNSSICVVGDEDQSIYGFRGATPENFIR-- 276 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR--SDNKRPLDPLDSSIT 375 F + D + ++ + + + R +P+ + + Sbjct: 277 --------FREEY-DAEVVTLEDNFRSRAGIVLTADSFMRGERHYEKTIKPVRDGGTDVV 327 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 E + + + + ++ + +++ + A + Sbjct: 328 ILKSRDVNSEARNIVSLIKKLKSSGKIPEYGYVALLFRSVRNHADKVLA----ELRREGI 383 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY + + + + + L Sbjct: 384 PYIVRGDGSFLKRYEVRSMLYFL-AYVDPPDYGGRFRKW----------------DGWWN 426 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 G + + +R LE F R L + + + Sbjct: 427 ISRFRGEFLDLTGETLRALESLDRNCRLSDFTSRRELEEIGVHG-----EDAEKILGLNR 481 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 + E+ ++L L +++ A + Sbjct: 482 IRHEVGKGSLTVLSTFYSILE--------------VTGYLRRLIEDGSDSSRAKIFNLAK 527 Query: 616 WQAIIAEGLGAQ-YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 ++I + L L L + + A V I T+ + + F V Sbjct: 528 LSSLIDRYEAIKPGARIQDLLWYLYLLPTHLHHDEAALEDPA-SVKIMTVHQAKGLEFPV 586 Query: 675 VCLLGMNDGVYP-RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 V + + +G +P ++ + + D+DR LF A+ AQ L IS Sbjct: 587 VFICSVINGRFPVKRRKERDTIPIPGELLLSPGEVPDEDRRLFYVAMTRAQDALIISTAP 646 Query: 734 RSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 R + + S + +L + G V L + P Sbjct: 647 R--INTRKVGVSPFITDLREKCGIYEC-----------DCTSVSRCLEREWSEEPL---- 689 Query: 794 YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRL 853 + L + P R Sbjct: 690 -------------------------------------RINFSALFTYEECPFRYMLIYHY 712 Query: 854 QVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER-----LFRRFRAAGDLP 908 + + I + L L L RR +P Sbjct: 713 GFVYPETFMQ------------RYGIILHRCLEELHLAMKNSEEINGALIRRIVERCWIP 760 Query: 909 YGAFGEIFWETQCQEMQQLADRVIACRQPGQSME--IDLACNGVQITGWLPQVQPDGLLR 966 G ++ +E+ S+E + + I G + Sbjct: 761 MGRDDKVKKRRLERELLNYYHDTRDHTGEVVSVEEPFSIPDTDIIIEGRTDLIIRTRDGE 820 Query: 967 WRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAA 1013 + + L Y +RF L+A Sbjct: 821 LELVDFKAREHGGVERMALEYQ------LRTYEYALRERYRFDSLSA 861 >UniRef50_C3JKU1 UvrD/REP helicase domain protein n=6 Tax=Corynebacterineae RepID=C3JKU1_RHOER Length = 1130 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 145/1112 (13%), Positives = 279/1112 (25%), Gaps = 166/1112 (14%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPA 66 + + + + A + + DP E + L + AQ L + ++ A D Sbjct: 50 AGKTETMAARVV-WLVANGFVDP-EAVLGLTFTRKAAQQLTSRIRKRLARLAGSDVL--- 104 Query: 67 SFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQ 126 + A + ++ +LL L + +L+Q Sbjct: 105 ----RALDPTGGVRSRILAGEPEVSTYHAYA--GRLLSEHGLLLPIEPSATLLSETELWQ 158 Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEG-LGEAQAWQAPLWK---ALVEYTHQLGQP 182 ++ + +D L + + ET + G L E L + L + H L Sbjct: 159 VAHRVVSGWDSDLDTDKNPGSITETVLALAGQLAEHLVDPEQLLEAHTELDKLIHTLPAG 218 Query: 183 RWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTN 242 R + + L+ LP V G + L + + Sbjct: 219 PKQRGGPSKELLNYLDVQHKRIELLP-LVARLGETLRREGALDFGSQMSLSARVASEHPE 277 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-----DGEQDVGN 297 + R R ++ + LF VG+ Sbjct: 278 VGQT-------------ERERFRVVLLDEYQDTGHAQRVLLSSLFGGGADGRLALTAVGD 324 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS--DILELENRAVAGVNI 355 P+ + +G G L + L LL + ++ + LEL N + A + Sbjct: 325 PMQSIYGWRGASAAN-LPRFATDFPLANGKPAPTLELLTSWRNPPEALELANLSSAPLRR 383 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP--TLTPRDIIVMVA 413 + S + + + + ++E + + +++ E V++ Sbjct: 384 RGVAVSTLRARPGAVAGDVRLALLGDLEQERQWVAEKIAEEYEAARAEDRPTPTAAVLIR 443 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 +P A + LP + P + I++L + + L Sbjct: 444 RNADAAP-----LAEALRSKGLPVEVVGLGGLLHTPEVADVIAMLRVVADPLAGSAAVRL 498 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 + AR+ I + L L Q E I G T + L Sbjct: 499 ----LTGARWQIGAKDLAALSQRSRELAISAGYGTAG------AVTDAEALTSAVQDALP 548 Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD 593 G G S+ + A + ++ +L R + Q + + Sbjct: 549 GE-NAEQAGLVDSISDPGPAERYSALGYTRINAIAAELASLRERIGQP-----LTELVAE 602 Query: 594 MLNAFFLPDAETEAAMTLI-----EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 + + + + A L + A E Sbjct: 603 VERVLGIGIEAGARTRVGVVGTAGREHLDAFADVVANYATRPTANLPGMLAFFAAAEQIE 662 Query: 649 RI----SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 + V I T+ + + ++VV + ++DGV+P A + + Sbjct: 663 KGLTPGEVEVAPDRVQILTVHSAKGLEWEVVAIPHVSDGVFPSSTASGSWLGALAELPPS 722 Query: 705 DR----------------------------------------SRRDDDRYLFLEALISAQ 724 R R D+DR LF AL + Sbjct: 723 LRGDRAVDADSADGVPVLDLEELYNRKDLENAITAHKKALSNRRLDEDRRLFYVALTRTE 782 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG----------DEALNCDESEA 774 + L+IS + + + PS + EL + + +E E + Sbjct: 783 RALFISAHHWAESGSEPKGPSEFLDELHQMVTAENDADEEDSRGAIGVVEEWAPAPEPDT 842 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG-------------------- 814 T + P DP + G ++ A L A + Sbjct: 843 ENPLAATPRTAQWPPDPLGARRGAVEAGAASVLSALASLPQDSQEAEEPEDDPENWASDV 902 Query: 815 -----KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 + + LP + + L A P RL+ + + Sbjct: 903 DVLLAEREARANARAEVILPAQLSVTQLVDLKADPDE--LAARLRRPLPYPPNPL----- 955 Query: 870 FILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 R + L AA + + L Sbjct: 956 -----ARRGTAFHAWIERRFGATRLLDLDELPGAADTGAGPETDLVKLQDAF-----LRS 1005 Query: 930 RVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLE-----H 984 + + + G + G + V D W E Sbjct: 1006 PWANRSPIEVEVPFETSIAGTVLRGRIDAVFADPDGGWTVIDWKTGAEPSAANEDAVVMQ 1065 Query: 985 LVYCASGGNGESRLFLRKDGEWRFPPLAAEQA 1016 L R G P +A Sbjct: 1066 LAAYRVAWAELMSARARSAGRNEQFPADKVRA 1097 >UniRef50_B2GL30 UvrD/Rep helicase family protein n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GL30_KOCRD Length = 1145 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 97/889 (10%), Positives = 200/889 (22%), Gaps = 137/889 (15%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG-QLFNSDGEQDVGNPLLASWGKLGRDY 310 DP R + ++ + + VG+P + +G G Sbjct: 272 VDPHARTVERDRFKVVLLDEFQDTSHAQLALFSGLYGDGHCVMAVGDPQQSIYGFRGASS 331 Query: 311 IYLLS--DLESSQELDAFVDVTPDNLLHNIQSD---ILELENRAVAGVNIEEFSRSDNK- 364 L S + + D + + L + +L++ N A + Sbjct: 332 GQLFSFVENFPRRTADGGSEYAATSFLTTAWRNSLSVLDVANAVAAPLRTAPAWSRSAAT 391 Query: 365 -------RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI---IVMVAD 414 + + + E + ++ V+ Sbjct: 392 VEVPPLDPAPGAVRGRVRVSRYATDTEEARATAQLIHEQRAAHEGQPLAEMPTMAVLCRR 451 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 + P +PY + P + +++L + S+ + L Sbjct: 452 RAQFEP-----LRLELEALDIPYEVVGLGGLLHTPEVSDVVAMLHVLTDPGRSDALARL- 505 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + AR+ + L L W E R ++ G Sbjct: 506 ---LAGARWRLGARDLAALGDWAAELERRHESAARGEQDTRPDDVVMADAVDG------S 556 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 +E+ + + + E + L +L + R L E L + + Sbjct: 557 SLVEALETLPRDGWVSSRGRSISPEGMRRLRALREDVVALREVLGDE--LTTVIHEVEAV 614 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP-LSLLRDELAQRLDQERISQR 653 L A + A + + ++ L +E Sbjct: 615 LGLDIELAALPGEDPATARRNLDAFTDQAVQFSATTRTHDVAAFLAWLETASREENGLDL 674 Query: 654 FLA----GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL--------GFDLMSQKP 701 A V + T+ + + + V + G+N G +P + + L Sbjct: 675 PPAHTRHDAVQLLTVHASKGLEWDHVHVPGLNQGDFPSTNSSAWTGEAAKLPWPLRGDAS 734 Query: 702 KRGD-----------------------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 + + ++R L A A+ L +S Sbjct: 735 QLPEWSPRVDDVRELEASFGEFAEDVAEHDLGEERRLAYVAFTRAKTLLELSGSVYRGTG 794 Query: 739 NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE 798 + S ++E D + T + P+DP Sbjct: 795 KKPKEVSPFLREARDMAESATPGFEAGPWADPGELEGNPQLDTRVSALWPYDPLEGPVIT 854 Query: 799 RQSYAREWLPAASQAGKAHS------------------EFVQPLPFTLPETVPLETLQRF 840 R S + + + AH + +P R Sbjct: 855 RTSRDADGTLSETVLPPAHEGRRARAEAAAQAVRNGGFPHLADVPDEELAAGEAGARVRR 914 Query: 841 WAHPVRAFFQMRLQVNFRTE------------DSEIPDTEPFIL-----------EGLSR 877 W H R S D E F+ Sbjct: 915 WRHEAELLLARRSDPERPRTVHMPSHVSASALVSMDSDPEGFVSTLRRPMPRRPGSAARA 974 Query: 878 YQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP 937 + A + ++ + + A + Sbjct: 975 GTAFHTWVENFYGDSALLDPDELPGADDHVDE----DLDLPRLAETFR--ASPWAERQPY 1028 Query: 938 GQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL----------WLEHLVY 987 + ++ + + G + V W + L L + Sbjct: 1029 AVELPVETPVGSLTVRGRIDAVFRTADG-WELVDWKTGRVPHGEDLRRKSGQLALYRLAF 1087 Query: 988 CASGGNGESRL-----FLRKDGEWRFPPLAAEQALHYLSQLI-EGYREG 1030 G + ++ D R LA EQ L ++ Y G Sbjct: 1088 ARLHGIPLESVSAAFYYVASDRVVRPLDLADEQ---QLEGIVSSLYARG 1133 >UniRef50_A6NZ65 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZ65_9BACE Length = 830 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 76/656 (11%), Positives = 178/656 (27%), Gaps = 110/656 (16%) Query: 166 APLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA------L 219 L + + + A+ + + ++ P++ + IS L Sbjct: 164 RILRRDIDRLGFSKSFTIYDTADAERVIKDIIKDFNLDDKAFPAKSIVGYISRAKDAMKL 223 Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAK-------------------- 259 YL + G + + Y ++D L Sbjct: 224 GADYLAECEKSGDY--RLIKIAKVYVEYEKRLRDANALDFDDIILHTVRLLKEFDEVREY 281 Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLE 318 + R ++ + A L + VG+ + + G +LS Sbjct: 282 YQRKFRYVLIDEYQDTNNLQYLLASTLAGGYENICVVGDDDQSIYRFRGATIENILS--- 338 Query: 319 SSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSIT 375 F + ++ + +N A + + + Sbjct: 339 -------FESQYKGARVIRLEQNYRSTKNILEASNAVIRNNEGRKGKELWTDHGEGDKVQ 391 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 + + E + + ++L +D V+ A + Sbjct: 392 CYTAMNEHDEAQYVAAQILGSFSAGR--HWKDHAVLYRMNAQ-----SNQIEQAFKRNGV 444 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY I ++ ++ L + ++ + +++ P I + Sbjct: 445 PYRIIGGIRFFDRAEIKDMLAYLCVINNPGDDLRLQRIINNPP----RGIGATTIER--- 497 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 A + + W+ ++ Sbjct: 498 ------------------------------------AQTIAAQEGRSLWE-IISNARVYP 520 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 + + LAS + R+ + + + A L T T +E Sbjct: 521 ELQKAAAKLASFTDMIAELRKLSGEMELPAFYEELVARTGYAVMLEQKNTIEDRTRLENV 580 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 + + + + L+ DE+A D + S V + T+ + + F VV Sbjct: 581 QELLTSINGYLENAVEPSLAGFLDEIALYTDLD--SHDPEEDCVVMMTMHSAKGLEFPVV 638 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 ++G+ +G++P G+ +++R L A+ A++KLY++ + Sbjct: 639 FVVGVEEGIFPGI------------RAIGEAEEMEEERRLCYVAMTRAKEKLYMTCASQR 686 Query: 736 IQDNSE--RFPSVLVQELI-DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP 788 + PS + E+ +Y+ +S LP E + + K Sbjct: 687 MLFGRTNNNRPSRFLGEIPEEYVEKSGRLPRSERTEEKQDGEQPKKKAPAWRKPAE 742 >UniRef50_C6V4L3 DNA helicase II, UvrD/Rep family, N-terminal n=4 Tax=Alphaproteobacteria RepID=C6V4L3_NEORI Length = 481 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 63/508 (12%), Positives = 142/508 (27%), Gaps = 94/508 (18%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDS-ENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 KD L K + R ++ + VG+ + +G G + Sbjct: 61 KDAETLEKYKEKFRYIMVDEYQDTNLCQYLWLRLLAQKHSNICCVGDDDQSIYGWRGAEV 120 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS---DNKRPL 367 +L F + ++ + A N+ + ++S Sbjct: 121 GNILR----------FAKDFEGAKVIKLEQNYRSTNKILTAAHNVIKNNQSRLTKKLWTA 170 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 P I ++E + + D ++V + F F Sbjct: 171 YPGGEEIQIFTYMDSEQEARAIIRMIKERKLV---CRYSDTAILVR-----AGFQTRAFE 222 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A +PY + + I+ L L + + +++ P + + + Sbjct: 223 EAAIHENVPYRVVGGLKFYERKEIRDVIAYLRLVVNPNDNLAFERIINTP----KRGLGQ 278 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L + + E G +++ Sbjct: 279 ASLNKIYNYSLEEGC---------------------------------------SMFEAA 299 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 +E+ L + L + + Q+ W+ + L + L + E Sbjct: 300 RKLEENEKLKS---TALLTFVKQVRKWQEE-SLNHSLHDLLKKITLESGYISALREQDET 355 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + +++ ++ I ++ + + Q VN+ TL Sbjct: 356 RIENVDELFRVIQEFDDAT---------DFLQHVSLLTESDA--QINNTDAVNVMTLHAS 404 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F+ V L G DG +P + + +++R L + A++ L Sbjct: 405 KGLEFEQVFLPGWEDGTFPHARSLFST------------EQIEEERRLAYVGITRAKRFL 452 Query: 728 YISYIGRSIQDNSER--FPSVLVQELID 753 I+ R + NS + S + EL + Sbjct: 453 TITSAHRRLIRNSWQNTVKSRFMLELAE 480 >UniRef50_B0DAK6 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0DAK6_LACBS Length = 1055 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 56/581 (9%), Positives = 144/581 (24%), Gaps = 96/581 (16%) Query: 265 RRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELD 324 R ++ + + L + VG+P + +G + L Sbjct: 257 RHILVDEFQDTNITQYKLMRALAIARCVTIVGDPDQSIYGWRSAEVGNLSKM-------- 308 Query: 325 AFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS---DNKRPLDPLDSSITFHVCHS 381 PD ++ + A + I +S + P + + + Sbjct: 309 --RRDFPDTEQVLLEENYRSTAAILKASLAIISQDKSRIQKSLHTSHPNGFTPVLYQVQT 366 Query: 382 PQREVEVLHDRLLAMLEEDPT-LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 E + + ++ L D ++++ + V +A +P + Sbjct: 367 EHEEAAFIAIEMKRLVAHMGGALNWGDFVILLRFNA-----LSRVIETALQKEGIPSRVL 421 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 ++ ++ L + D+ ++VP I E+ + L +S Sbjct: 422 GGHKFFERLEVKDLLAYLQVVDNPNFVPAFKRAVNVP----GRGIGEKTVAELIGRAEKS 477 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 +++ +++ + + Sbjct: 478 NQS------------------------------------PLAIVEAICD-NKAPDIKPAV 500 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM--LNAFFLPDAETEAAMTLIEQQWQA 618 +A + + R + + D+ + ++ Sbjct: 501 KRKVAPFVTAIRSLRAQAHNSSSPADLVRKLVDLIKYEDHLKKTQSDWESRWENVKELIT 560 Query: 619 IIAEGLGAQYGDAV----------------PLSLLRDELAQRLDQERISQRFLAGPVNIC 662 +E + PL + + S+ V I Sbjct: 561 FASEMEAQNQAEEAADAVAGGDNSIEMSTTPLRQFLQASMLSSEGDNQSEEGNKDKVTIS 620 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 T + + + VV + ++ +P + ++R L A Sbjct: 621 TCHSAKGLEWPVVMIPSVDQNTFPFYRSEDT----------------AEERRLLYVACTR 664 Query: 723 AQQKLYISYIGRSIQDNSERFP--SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 AQ LY+S + + S + +++ G + + ++ Sbjct: 665 AQSLLYVSRATTRMVAGETKSKELSEFISSVLNDNGLKNEMAFFSQQIPFFTQEDRATIA 724 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFV 821 T L P + + + + P G H Sbjct: 725 TVLQRPPPEEAEVQRRVATFERSGREHPMQIYWGGGHHVAP 765 >UniRef50_Q11GU4 ATP-dependent DNA helicase, Rep family n=53 Tax=Alphaproteobacteria RepID=Q11GU4_MESSB Length = 876 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 89/670 (13%), Positives = 181/670 (27%), Gaps = 112/670 (16%) Query: 190 YQRFIETLESATTCPPGL-PSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYY- 247 YQ+ ++TL + L P R+F P L+ A K+I + Y Sbjct: 215 YQQRLKTLNATDFGDLLLHPIRIFREH-----PDVLREYHAKFKYILVDEYQDTNTAQYM 269 Query: 248 WGDIKDPA-------YLAKLLTRQRRHSFEDRELPLF------RDSENAGQLFNSDGEQD 294 W + L + + + G N Sbjct: 270 WLRLLAQRPGSPGTGGLPAEGRARGHALGDVSQAHAAGGPGASPGQRPGGASANKVNICC 329 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA-VAGV 353 VG+ + +G G + +L F P + ++ + + A Sbjct: 330 VGDDDQSIYGWRGAEVDNILR----------FEKDFPGATVIRLERNYRSTAHILGAASH 379 Query: 354 NIEEFSRSDNKRPLDPLDSS----ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 I K + H + E L + + A+ + D+ Sbjct: 380 LIAHNEGRLGKTLFTEHSDPDAPRVKVHAAWDSEEEARALGEEIEAL--QAKGHALNDMA 437 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 ++V + F F L Y + + ++ + Sbjct: 438 ILVR-----ASFQMREFEDRFVTLGLSYRVIGGPRFYERQEIRDALAYFRVVAQGADDLA 492 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 +++VP + + E +R + G+ Sbjct: 493 FERIVNVP----KRGLGESAVRQIHDVARMRGVP-------------------------- 522 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 Q+ + L + L +L+ W+ L + R + E Sbjct: 523 -------------LLQAARDLVGTEELKPKPRASLRNLVESFERWQGLLDRTRHI-ELAE 568 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 + + + A + + +I + L + +A +D ER Sbjct: 569 TILEESGYTDMWKNDRSAEAPGRLENLKELIRSMEEYES-----LRAFLEHVALVMDAER 623 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 V++ TL + + F V L G +G++P Q + G RS Sbjct: 624 ---DEELDAVSLMTLHSAKGLEFDTVFLPGWEEGLFPHQRSLD----------EGGRSGL 670 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQ------SHYL 761 +++R L + A++ L+I + PS + EL + + S Sbjct: 671 EEERRLAYVGVTRAKKNLHIWFTSNRRIHGLWQSTIPSRFLDELPEKHVEVTDDGGSFGG 730 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFV 821 G + + F PG +++ A G V Sbjct: 731 YGRPIADRQPGRPNPYGSSRFDNMGEVFSNSYATPGWQRAQKNRTEATARNWGSRSGHQV 790 Query: 822 QPLPFTLPET 831 + + + P++ Sbjct: 791 ERIGYGEPDS 800 >UniRef50_D1X726 UvrD/REP helicase n=22 Tax=Streptomyces RepID=D1X726_9ACTO Length = 1165 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 135/1105 (12%), Positives = 255/1105 (23%), Gaps = 165/1105 (14%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPAS 67 + L + V R DP ++L S A L+ ++ + G A S Sbjct: 18 GKTTTLVESVAARV--NRGADP-ARVLVLTFSRKAAVELRDRMAARLGAARGPQATTFHS 74 Query: 68 FIWDMFV-----RVLPEI------PKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYL- 115 F + + + + P++ ++ ++ +L L LR L Sbjct: 75 FCYALVRAHQDADLFADPLRLLSGPEQDVTVRELLAGQLDLEKAGLAHVRWPDELRSCLT 134 Query: 116 -TDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 +D+ + S+ L PD LA + A + A L Sbjct: 135 TRGFADEVRAVLARSRELGL-------GPDALAAFARRTGRPDWSAAAQFLAEYLDILDA 187 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 HRA L E E V++ P ++ L AL + Sbjct: 188 QGVLDYAELVHRAVLLAERPEVAERLAGSYDA----VYVDEYQDTDPAQVRLLHALAGNR 243 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 Y + R + Sbjct: 244 GRT-------PEY------TRGRGEEGRGDGGRGDGGRGEEARAGGARSEAARGGRTLIA 290 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS-------DILELEN 347 G+P + + G D +L ++ + D D P +L + L Sbjct: 291 FGDPDQSIYTFRGADVNGILDFPDAFRRADG--DPAPVGVLTTSRRSGAGLLAATRLLTR 348 Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 R + R+ + + + E+E + D L ED + ++ Sbjct: 349 RMPLTRLPADMVRAHRDPAAVRDGGRVETYTYPTASTELENIADLLRRAHLED-GVPWQE 407 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD----- 462 + V+V P ++ SA + D + P + ++ L Sbjct: 408 MAVLVRAGGRSLPAVRRALTSAGVPLEVD---GDDLPLRHEPAVAPLLTALRTVATAALR 464 Query: 463 ---SRFVSEDVLALLDVPVLAARFDITEEG--------------LRYLRQWVNESGIRWG 505 E A D A R + + G G Sbjct: 465 GLLDGDRDEADGADRDEADGAGRDEAGGADPGETGGAYQGDTAGADPGETAGADPGETGG 524 Query: 506 IDDDNVRELELPATGQHTW------------------RFGLTRMLLGYAMESAQGEWQSV 547 D +W L R+ E + Sbjct: 525 ADPGETGGAGRAGARMSSWLDTETALTLLTSPLGSMDAADLRRLGRALRDEERAAGIRVP 584 Query: 548 LPYDESSGLIAELVGHL-----------ASLLMQLNIWRRGLAQERPLEEWLPVCRDM-- 594 P DE L L L R L EE L + Sbjct: 585 APSDELLARALAEPERLVTHDPAYAHGAQRLGALLRKARELLEGGGTAEEALWALWNGTP 644 Query: 595 ----LNAFFLPDAETEAAMTLIEQQWQAIIA-EGLGAQYGDAVPLSLLRDELAQR--LDQ 647 L L A+ + +E+ + Sbjct: 645 WPGRLERAALRGGAGGRNADRDLDAVCALFETAARAEERTGGRGALNFLEEVDAQDIAAD 704 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 + V + T + + +++V L G+ +G++P + G Sbjct: 705 TLSRRTARPDAVRLMTAHRSKGLEWRLVVLAGVQEGLWPDLRRRGSLLEADRIGGDGLAE 764 Query: 708 R------RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 ++R LF A A+ +L ++ + D PS + EL + Sbjct: 765 PLTPGALLAEERRLFYVAATRARDRLVVTAVKAPADDGD--QPSRFLTELGVE-PRDVTG 821 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNY----------QPGERQSYAREWLPAAS 811 L A ++A + Sbjct: 822 RPRRPLAVAALVAELRATTVDPAASEALREAAAHRLARLAALTDDEGQPLVPAAHPYRWW 881 Query: 812 QAGKAHSEFVQPLPFTLPETVPLETLQRFW-AHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 + V P T+ L + ++ F ++ + Sbjct: 882 GLEEPTRSAVPLRDRDQPVTLSGSALDQLANTCALQWFLGREVKADAPAT---------- 931 Query: 871 ILEGLSRYQINQQLLNALVEQDDAERL------FRRFRAAGDLPYGAFGEIFWETQCQEM 924 + L + + L E + + Sbjct: 932 --AAQGFGNVVHVLADEVASSRTPADLDVLMERLDSVWNGLAFDAPWKSEQEKDQARAAL 989 Query: 925 QQLADRVIACRQPGQSMEIDLACN--------GVQITGWLPQVQPDGLLRWRPSLLS--- 973 ++ + R + + V+I G + +V+ D R Sbjct: 990 ERFLHWHVLDRGGRTPTASEHDFDVTLEAGEYAVRIRGSMDRVEQDAEGRAYVVDFKTGK 1049 Query: 974 ---VAQGMQLWLEHLVYCASGGNGE 995 + + VY + G Sbjct: 1050 GAPTKDEVASHPQLAVYQLAVREGA 1074 >UniRef50_Q836J9 ATP-dependent helicase/deoxyribonuclease subunit B n=37 Tax=Enterococcus RepID=ADDB_ENTFA Length = 1196 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 124/1109 (11%), Positives = 275/1109 (24%), Gaps = 172/1109 (15%) Query: 3 RVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDF 62 + + LEA + ++ +D LV + + L + + Sbjct: 4 QFIRGTAVADLEAPLIQATKQWLEEDAQHEVFYLVPNHIKFEQEIQVLQKLRQL------ 57 Query: 63 PLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLP-----QLLEREDFTLLRHYLTD 117 + F+ ++W + P L + + R L + Sbjct: 58 --------QTTTSDSITSTRLQVFSFYRLAWYYLQHTPFYSADVLSDAGAAMIFRKILVE 109 Query: 118 DSDKRKLFQ----LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGE--AQAWQAPLWKA 171 ++ ++F+ LF Y R + E +E E ++ Sbjct: 110 AEEELQIFRGEINKPGFIQQLFQLYQEMREGNIEIAELYPFLEKQTENPKGQDLQLKFQD 169 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 L + I+ L + I G L+ ++ L Sbjct: 170 LTLIFTRFQLQMSQYGYESAEIIQHLSEYLQTVDLSNVQFVISGYQQFTARELKLIEVLM 229 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 + + Y D+ DP L + +L + Sbjct: 230 AQAGSVKVALLLDKQYPHDLPDPRSLFYEAGQTYHQL---YQLARQKQIPILSDYVEKKE 286 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 NP L Q L+ + Sbjct: 287 VLIT-NPDL--------------------QGLNDYW------------------------ 301 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 I+ D + + + E+ + + ++ + ++I V+ Sbjct: 302 ---IQSQEHLPPLSTADWRGDGLFLWRAENVKEELTHVATEIRRLVV-EEGYRYKEIQVL 357 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 D+D Y ++ +F +P + A HP++E SL ++ + DVL Sbjct: 358 TRDLDCYENLLEPIFAE----HEIPVYVDRDMAMDRHPLVEWIESLFAIHSYNYRYRDVL 413 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW------- 524 L + + L W+N+ D + + W Sbjct: 414 RFLRTELFMPMNQLATSE-ESLTDWLNQRNAWRRKVDITENVVLAYGYEGYYWSQEKDWE 472 Query: 525 -----RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 + + E + QS+ S + Sbjct: 473 FIRYDFEAEEQEDVATMEEESNAIRQSLQRLLPSYFQAMISAKTGLEAATVFYHFLLQSG 532 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 L+ W L A ET +++ E + + + ++ Sbjct: 533 VATQLKMWR------LQAIEAGQLETARNHEQTWDALMSLLDEYVTVYGESSFDFTTFQE 586 Query: 640 ELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 L+ S+ A V + + R KV +GM + ++P+++ Sbjct: 587 IFVSGLEGLHYSKVPTAIDQVQVRAMDLTRPGAAKVTFAIGMTEEIFPQKIENKTLLSDE 646 Query: 699 QKPKRGDR------------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 ++ D + + Y+ SA+++LY++Y E PS Sbjct: 647 ERQTINDTLTENQYLRGTTGRKIAQEPYVAYLVFSSARERLYLTYPSVKDTA-QEVKPSP 705 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESE--------ARVKAHLTCLHTRMPFDPQNYQPGE 798 + + + + + + DE+ + LT L + + P Sbjct: 706 YFKNIQKDLNLPVFEKNETTIFDDETTSLAHISTYRTLIGELTRLKRQRKETQEGLLPFW 765 Query: 799 RQSYAREWLPAASQAGK------AHSEFVQPLPFTLPETVP-------LETLQRFWAHPV 845 + + K H + + L E + + ++ F+ Sbjct: 766 LNMEKALMNQSIAPLAKQVFESLTHQNIPEKIDEVLAEPLYGKDIYTSVSRMESFYRCQY 825 Query: 846 RAFFQMRLQVNFRTEDSEIPDT-EPFILEGLSRYQINQQLLNALVEQDDAERL------- 897 + F + L++ R P F E L ++ + + + + + Sbjct: 826 QYFSRYGLRLKERDVFGLSPAATGEFFHEALDQFFKLLIMNQRNLSELTDQEVNLLAEEV 885 Query: 898 -------FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEI------- 943 R +T + L + E+ Sbjct: 886 LNSILGDARFSVLTTSSRMNYIRYQLSQTIKKVSWALKRQSQRSGMTTVQTEVLFGQIAA 945 Query: 944 -------DLAC---NGVQITGWLPQVQP---DGLLRWRPSLLSVAQGMQLWLEHLVYCAS 990 +L + + G + ++ + E Y Sbjct: 946 KKGISGLELPLKNQGKIHVRGKIDRIDQLVTPESTYLGVIDYKSSHRKFNMTE--AYYGL 1003 Query: 991 GGNGESRLFLRKDGEWRFPPLAAEQALHY 1019 + L + + A+ A Sbjct: 1004 AMQMLTYLDVALMDAVQLVGQEAKPAGSL 1032 >UniRef50_C4DDU0 DNA/RNA helicase, superfamily I n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDU0_9ACTO Length = 1041 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 97/838 (11%), Positives = 194/838 (23%), Gaps = 138/838 (16%) Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLES 319 R ++ + E LF VG+P + + G L Sbjct: 260 RERFGVVLLDEYQDTSHAQVELLKSLFGGGHPVTAVGDPCQSIYAWRGASTGTLSRFPGD 319 Query: 320 SQELDAFVDVT-PDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHV 378 D ++ IL + N + F S P P + +T + Sbjct: 320 FPHADGTEADRLELTASWRNRASILTVANTVSEPLRTMGFPVS-PLEPGVPGEGEVTAAM 378 Query: 379 CHSPQREVEVLHDRLLAMLEEDPTLT-------PRDIIVMVADIDSYSPFIQAVFGSAPA 431 ++ E E + R+ + ++ P V+ A Sbjct: 379 LNTADDEAEWVATRIYRLWADNGFAPGSPVEGMPPTTAVLARRRSQI-----PRLEKALR 433 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 + LP + P + S L++ + L + R+ I + Sbjct: 434 AKGLPVEVIGLGGLLDAPEVRELHSTLTVLARPTAGPAFMRL----LTGPRWRIGPRDIA 489 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 L E + + L + +++ Sbjct: 490 ALHARARELAPERRGFEPSAEGL------------------------NEASLAEALEDLG 525 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + +L +L R L ++P+ + + A Sbjct: 526 DLRRYSDAAAERYTALREELGYLRSRL--DQPVSDLIAEILK-----VSGLDIEVAVHRG 578 Query: 612 IEQQWQAIIAEGLGAQYGDAVP-LSLLRDELAQRLDQERI----SQRFLAGPVNICTLMP 666 ++ A I E + ++P L L ++ER G V I T+ Sbjct: 579 DSERLDAFIDEAVRYTSTASLPSLDGFLSYLDAAEERERGLELTGTTEHTGAVQILTVHA 638 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD---------------- 710 + + + V + G+ GV P ++ + + K R Sbjct: 639 AKGLEWDCVAVPGLAKGVLPGKVMGGSWLTDTGKLPYPLRGDAAELPYFRLGGVTKAAEL 698 Query: 711 -----------------DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 ++R L AL A+ L+ + S R PS + E + Sbjct: 699 SRAEAEFKKDVQFHHEVEERRLAYVALTRARTHLFACGYWWDDGE-SAREPSPYLDETVA 757 Query: 754 YIGQSHYLPGDEALNCDESEARVKAHLTCLHT-----------RMPFDPQNYQPGERQSY 802 G+ D + A + + Sbjct: 758 AGGRVDEWIEDPGEENPLLATELSADWPEPEPLGSNQITVAAAAGAVRASDGALDDSAQA 817 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 R A + + +P + + L + A ++R V Sbjct: 818 KRWAEEAELLLAERAESASDGMEVPVPSQLSVSQLVAWHADAQEFAARLRRPVPEPPAP- 876 Query: 863 EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQ 922 R + + LF G + + Sbjct: 877 -----------HTRRGTAFHAWVEKRFDGGT---LFDMDDLPGAADGEPDTDAELAALQE 922 Query: 923 EMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW- 981 A + + GV + G + V + + + Sbjct: 923 AFN--ASEWASRTPIAVEVPFVTVLEGVVVRGRMDAVFATDDGGYEIVDWKTGRPPRGHA 980 Query: 982 ---------LEHLVYCASGGNG-----ESRLFLRKDGEWRFPPLAAEQALHYLSQLIE 1025 + G + ++R++ R L L QL Sbjct: 981 AKAAAVQLAAYREAWAVLRGVHRSKVSAAFHYVRQNVTVRPSGLP------LLEQLAA 1032 >UniRef50_Q1CRC0 DNA helicase II n=13 Tax=Helicobacter RepID=Q1CRC0_HELPH Length = 682 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 72/682 (10%), Positives = 179/682 (26%), Gaps = 113/682 (16%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEA----QAWQAPLWKALVEYTHQLGQP 182 L+S+ A L V + L T + + E Q + L + Sbjct: 41 LTSRLAYLIGVCGVPSENTLTLTFTNKASKEMQERALKLLKNQTLIPPLLCTFHRFGLLF 100 Query: 183 RWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTN 242 +L +R + + L ++ I A + L Sbjct: 101 LRQHMSLLKRACDFSVLDSDEVKTLCKQLKISNFRASISQIKNGMMDLSMQDSECYKAYE 160 Query: 243 PCRYYW--GDIKDPAYLAKLLTR---------------QRRHSFEDRELPLFRDSENAGQ 285 + ++ D L L + ++ + E + Sbjct: 161 LYQNALKKDNLVDFDDLLFLSLKILQDNETIAKETSEHYHYIMVDEYQDTNALQLEFLKK 220 Query: 286 LFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE 344 L VG+ + +G G D +L+ F + ++++ Sbjct: 221 LSFTHHNLCVVGDDDQSIYGFRGADISNILN----------FSKHFKGAKVVKLETNYRS 270 Query: 345 LENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 A + ++ + + S+ + + E + ++ A+L++ Sbjct: 271 SAEILACANSLISHNQHRHVKTLQSFKGSHKSVICKEYLTQKEESLDVAYQIKALLKKGE 330 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 L +I ++ + + +PY + + ++ ++ + + Sbjct: 331 NL--ENIAILYRLNG-----LSRSIEESLNALNIPYRLIGAVSFYERAEVKDALAFMHVV 383 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 + + +L+ P Sbjct: 384 AKKDDRFFIKRVLNKPPRGLGKIT------------------------------------ 407 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 + + +++ L + L + + R Sbjct: 408 -------QEWIFSLLDDEGLNLEEALKLGAFKDKLNPKNEYALKKFMAMIGRLREAFEI- 459 Query: 582 RPLEEWLPVCRDMLNAFFLPDAET--EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 +EE+ + N + E E +++ + L + Sbjct: 460 -SVEEFCARFLEETNLLKSYEKEDNYEEREGFVKELLTLLKEHFKT---NPTHSLLDFLN 515 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 E + A V+ ++ + + FK V ++G+ +G +P + Sbjct: 516 E-----SVLDVHNAENAQKVSCMSVHMSKGLEFKHVFVIGLEEGFFPHRGFNQ------- 563 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQ 757 S +++R L A+ A++ L +SY+ + PSV ++E + Q Sbjct: 564 ------ESDLEEERRLAYVAITRAKEGLQLSYVKERSYFGRKISCSPSVFLEE-AQLLQQ 616 Query: 758 SHYLPGDEALNCDESEARVKAH 779 D + + H Sbjct: 617 DKPPKQDHKKDTPIKVGDLIKH 638 >UniRef50_A5HZM6 ATP-dependent DNA helicase n=4 Tax=Clostridiales RepID=A5HZM6_CLOBH Length = 884 Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats. Identities = 64/705 (9%), Positives = 188/705 (26%), Gaps = 94/705 (13%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIY 312 P K + ++ + + L VG+P + G + Sbjct: 211 PKVRKKWQQKLEYIMVDEFQDVNIKQYRLVSILSEYHKNLFVVGDPDQTVYSWRGANVNL 270 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV-NIEEFSRSDNKRPLDPLD 371 +L+ F + + N A I + + +K + Sbjct: 271 ILN----------FDKEFKGTKTIMMNQNYRSSSNIIKASNSLISKNKQRIDKELIPIKH 320 Query: 372 SSITFHVCHSP--QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 +I HS +E + +++ +++ + ++I ++ + ++ A Sbjct: 321 GNIPVVYKHSENIYKEANWIINQIEQIIKGGN--SYKNIAILYR-----AHYVSRSIEEA 373 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY + ++ +S L + + +++ P + + ++ Sbjct: 374 LLKNKIPYTLYSGVEFYQRKEIKDILSYLRMVVFE-DDLSFIRIINEP----KRNFGKKR 428 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + +R++ ++ + S+ Sbjct: 429 MEIIRKYAEDNNC---------------------------------------SLYSSLKI 449 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 E + L+ + + + L E + L ++ + + Sbjct: 450 NLEDKLIAKSKADKFVDLIERYKKIYKEMRITDLLMEL---LNNSGYEAMLRESGEDERL 506 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + + +I G+ L E++ + +N+ TL + Sbjct: 507 ENLAELKNSISDY--ENSAGEDTTLEDYLQEISLF---TNSDLKENKDTINMMTLHTAKG 561 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V + N+G++P + + +++R L A+ L++ Sbjct: 562 LEFPYVFICEFNEGIFPSARTNT-------------KEKMEEERRLAYVGYTRAKNALFL 608 Query: 730 SYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 S D S RFPS + + ++ + + F Sbjct: 609 SDAEGVNYDGSYRFPSRFIFNTGKTYLNYLVELKESLIDDANEFISDSENSMNKSNNIKF 668 Query: 790 DPQNYQPGERQSY--------AREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFW 841 + + +T L+ ++ Sbjct: 669 KIGERIIHKLLGLGVIIGIDNDNSSYMIKFDNAETFRNISFSTQLDKADTNNLDIIKSNE 728 Query: 842 AHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRF 901 + RL+ + ++ + + R + + ++ Sbjct: 729 RKAIDHLEAERLEAERKEQERLEAERLEAERKEQERLEAERLEAERKEQERLEAERLEAE 788 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLA 946 R + E + Q + + + ++ ++ +I+++ Sbjct: 789 RKEQERLEAERLEAERKEQERLEAERLEAERKEQERLEAEQIEVS 833 >UniRef50_Q6KHF5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mobile RepID=Q6KHF5_MYCMO Length = 723 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 67/549 (12%), Positives = 168/549 (30%), Gaps = 82/549 (14%) Query: 222 VYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSE 281 Y + L+ L LL + + P K R + ++ + E Sbjct: 179 EYNEILKKLALLDFNDLLLKT--QELFEKF--PEIKLKWSRRFKYILVDEFQDTSPIQYE 234 Query: 282 NAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD 341 L + VG+P + G + +L F + N+ + Sbjct: 235 IIKTLAQNHNLTIVGDPDQTIYSWRGANVNLILD----------FHKDFENAKTINLNLN 284 Query: 342 ILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 E A + ++ + + + FH SP+ E + D++ ++ Sbjct: 285 YRSTEKILKHANSLIHFNKKRLEKDLVAYTKQGQEVIFHHALSPELEARWVVDKIKWLIS 344 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 + +I ++ + F F A + + + ++ +S + Sbjct: 345 IEK-AKLSEISIIYR-----ANFYSKNFEDALLRESIHHQVHGGEKFYERSEIKNALSYI 398 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 L S +L++P Sbjct: 399 KLLVS-DSDLAFQRILNIP----------------------------------------- 416 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 Q + +L Y ES +Q++ + E + + + L L+ ++N +++ + Sbjct: 417 --QRSIGNIYRNKILDYCDESNLSIFQAINNHLEDLPVSSNIREKLFDLIFKINKYQKII 474 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 + D+ +L + +T + + ++ + + Sbjct: 475 NENNVQVSVDEFFADIKYYDYLANEDTFKNGKV--DNVKELLIIISNWFRNNPK--KTFQ 530 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 D + SQ V++ + + + F V L+G+++ + P + A Sbjct: 531 DYFEEISLVPNASQEDDKNTVSLMNIHNCKGLEFSYVFLVGLSEEILPSKKALENDF--- 587 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIG 756 D S +++R L A+ A++ L+++ + N +++ S + E+ + Sbjct: 588 ------DDSNLEEERRLAYVAITRAKKMLFLTDSDGYLFGNFKTQKKTSRFIGEMGIVLE 641 Query: 757 QSHYLPGDE 765 + ++ Sbjct: 642 NENQKTMEQ 650 >UniRef50_C9M511 ATP-dependent DNA helicase PcrA n=2 Tax=Synergistaceae RepID=C9M511_9BACT Length = 673 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 64/533 (12%), Positives = 139/533 (26%), Gaps = 89/533 (16%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIY 312 P + ++ + L VG+P + +G G D Sbjct: 223 PEVKEREQKALDWVLVDEYQDVNAAQYRLMRLLASGGANLTAVGDPDQSIYGWRGADMS- 281 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILEL---ENRAVAGVNIEEFSRSDNKRPLDP 369 + F P + ++ + A + ++ R N Sbjct: 282 ---------MIMNFERDFPGASVMLLEQNYRSTGGILEAANSLISHNFDRREKNLWTDRE 332 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + C + E E++ + L D+ ++ + + Sbjct: 333 QGAKPQVWNCPTSDDEAELITTEIERFLSS--GYRASDVAILYRMNA-----LSRRIEES 385 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 LPY + + + +S L L + + + + ++P + Sbjct: 386 LLSHNLPYQVVRGQGFFDRREVRDVLSYLRLALNPYDRASLDRVGNLP----TRGLGPRS 441 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L L LL + W +V Sbjct: 442 LDK-----------------------------------LDAYLLSHRTADPADVWAAVAQ 466 Query: 550 Y-DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 E SG A LA + ++ L L+ L V + + A Sbjct: 467 TGAELSGQGAAGARQLAGAMGEI------LGCGGDLKRALDVILMRIGYETVLQKIDPAG 520 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 I++ + LAQ + +N+ TL + Sbjct: 521 WEDRYDNVMEILSLAGDGDSLP--------ELLAQAALYTDADRDSGGQGINLSTLHGAK 572 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F +V ++G+ +G++P + D + +++R L + AQ++L Sbjct: 573 GLEFPLVFMIGLEEGIFPHSRSSD------------DPAEIEEERRLCYVGMTRAQERLI 620 Query: 729 ISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 ++ + S + PS + E+ + + Sbjct: 621 LTRVRERRLFGSTTTQRPSRFLAEIAPDLRDEFDFGEVRPSVGYRFNRPSRRW 673 >UniRef50_C2BJF9 Superfamily I DNA and RNA helicase n=4 Tax=Corynebacterium RepID=C2BJF9_9CORY Length = 1059 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 110/917 (11%), Positives = 228/917 (24%), Gaps = 104/917 (11%) Query: 171 ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPS-RVFICGISALPP---VYLQA 226 + + H A + F +++ P + G Y+ Sbjct: 177 KFSQDIDNGLKDTSHIAEHARDFRADIDNLDKSQKNGPEYSKALLGYIQTQERRVQYVPL 236 Query: 227 LQALGKHI---EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 L+AL K ++ P + R + ++ + + Sbjct: 237 LEALKKEQSERQVITFGEQMAVAARVARDHPVVGKQQSQRYKVVMLDEYQDTSYAQRVLL 296 Query: 284 GQLFNSD----GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQ 339 LF D VG+P+ A +G G L+ + D L + + Sbjct: 297 RSLFGGDQEDLSVTAVGDPMQAIYGWRGATSEN-LTAFVEDFPVAPGTSAPKDQLTTSWR 355 Query: 340 S--DILELENRAVAGVNIEEFSRSDNKRPLD-PLDSSITFHVCHSPQREVEVLHDRLLAM 396 + L+L N GV D + I S RE E + + L Sbjct: 356 NPSGALDLANSVAEGVFEGVERPVDELSAAPHKGEGEIQLAYFESEVREREFVAEYLKEQ 415 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 E+ T V+V +P A +P I P ++ ++ Sbjct: 416 WEKREGDTFS-AAVLVRKNRHSAPIAA-----ALDKAGVPNEIIGLGGLLWQPEIQDLVA 469 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 + ++ + LL P+ ++ L S R R Sbjct: 470 IATMLVRPEDLPAAVRLLAGPICGL----GISDIQAL-----ASRQRNLAGAREERLRWE 520 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 P + + + G ++ E + + + + +L R Sbjct: 521 PGMDPEDYLRAQLEDVTAEEPDQRVGLADALADLGERDRYTPQGLARMEEVSAKLRHLR- 579 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 + +PL + + N A A G L Sbjct: 580 TYSLSKPLVDIFADIEALFNIRTEVLARGSAGGAT---HLDKFADIVAGFHGDSLYALLD 636 Query: 637 LRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ------- 688 ++ D + + A V I T + + ++ VC++ + Y + Sbjct: 637 YFALALEKEDGLDLGEVPAATDRVQIMTAHKAKGLEWEHVCVVHADSSSYSAKAETFLSR 696 Query: 689 -----------------LAPLGFDLMSQKPKRGDRSRRDDD-RYLFLEALISAQQKLYIS 730 F ++ K+ D + + ++ LF AL + L ++ Sbjct: 697 IDKVPGDDDYIEVPEDAQKRSHFQNACEEFKKADSAIKAEESARLFYVALTRTESTLTVT 756 Query: 731 YIGRSIQDNS-ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 G + + ++ P ++ L + Q ++ + Sbjct: 757 GSGTNNLNGKNKKAPYEYLERLKEQFPQYVVEWSVPDEPSEDDFGESAQFPALQASPEAV 816 Query: 790 D---------PQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 + +++ A + + + + LP + + Sbjct: 817 AGADLVLEAMEELPDLSRGETFELWEQEAGALIEEYKALQQPVVDVELPSELTASDMVAL 876 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR 900 A P++ + R V F+ R L Sbjct: 877 RADPLQFARRQRRPVPFKPN------------SYAKRGTAFHAWLEDRFGSPAL------ 918 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLAD-RVIACRQPGQSMEIDLACNGVQITGWLPQV 959 G+ E + + + + ++ + G + V Sbjct: 919 ---LGEEELPGIDEPEDFDLEELKEAFLNSEWAERQPEHVEAPFEITIGESVVRGRMDAV 975 Query: 960 QPDGLLRWRPSLLSVAQGMQLWLE-----HLVYCA------SGGNGESRLFLRKDGEWRF 1008 W + Q L A GG F + F Sbjct: 976 FRLEDGTWMVVDWKTGRPPQGEAMDAAKIQLAVYAEAWRRIHGGEKIRAAFYYVHDGYTF 1035 Query: 1009 PPLAAEQALHYLSQLIE 1025 P + L +L+E Sbjct: 1036 EPARLPRGEE-LKKLLE 1051 >UniRef50_Q6ZHK2 Os07g0492100 protein n=4 Tax=Poaceae RepID=Q6ZHK2_ORYSJ Length = 1165 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 86/764 (11%), Positives = 213/764 (27%), Gaps = 91/764 (11%) Query: 185 HRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPC 244 +A +Q+F+ +++ P + + G S L Y + L++ + ++ Sbjct: 433 DKAKKWQKFVTQAKASGRTPEEYEKKGDLTGASIL-RHYNEILRSCNALDYHDFINSSIT 491 Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWG 304 K P + + ++ + L + + VG+ + + Sbjct: 492 LL----TKFPEVYDECRNTWQAIVVDEFQDTSAMQYYLLKTLASHNRITIVGDEDQSIFS 547 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS--- 361 G D D+F P++ + + A + + Sbjct: 548 FNGADVSGF----------DSFRRDFPNHKEVRLSKNYRSTRAIVEAATALIHNNTKRQS 597 Query: 362 -DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED-PTLTPRDIIVMVADIDSYS 419 +P + I CHS + + D+++ I V+ Sbjct: 598 HKLAETDNPSGNKIIVKECHSEDSQCAFVIDKIIETTSSSVEGCHFGKIAVLYR-----R 652 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 F ++ +R +P+ I A V++A +++L + +L Sbjct: 653 QITGKAFQASFRNRKIPFNIH-GVAFYRKKVIKAIMAILKTTLPGCDDDAPWHQAFKAIL 711 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + ++ + ++ + + ++ ++ T + ++L Sbjct: 712 PGDKEEKKKIIHHIEKISLARKCSFISAATDIFSAKVSGTFKRAQITQGRKVLSAL---D 768 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 + + A + LL + + Sbjct: 769 SLSKLVEREQSVSVVISSAGDMLPQKYLLEK-----------------RAIVDADGGKLL 811 Query: 600 LPDAETEAAMTLIEQQWQAII--------AEGLGAQYGDAVPLSLLRDELAQR-LDQERI 650 D + + + + + + G A L D ++ R + R Sbjct: 812 NEDNDIRSVLQFLMDDVSDFLSTHFSSSVDTSKTEEKGCASTLKAFIDYISLRETENFRS 871 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 + + + T+ + + + VV ++ ND P G + S + Sbjct: 872 RKEENKNSITLTTIHQSKGLEWDVVFIVQANDSEIPLLHEYNGTV-------KEAGSTLE 924 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 ++R LF A+ A++KLYI ++ PS ++E+ ++ + Sbjct: 925 EERRLFYVAMTRARKKLYILHVTVDSNR-QLLQPSRFLREIPAHLLEVQGEGT------- 976 Query: 771 ESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE 830 P + QP S R + + + L Sbjct: 977 ----------VRRTPEQPVNIPFDQPEGDTSVERPMVVRNETSPFPEMDQPCLANDFLKR 1026 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ-----LL 885 + + F + + D F+++ R + ++ L Sbjct: 1027 ------FEIEDRAIISHIFHQWAKKQAFQNPKRLLDKIGFVIDERLRGKGYKRKDVLCKL 1080 Query: 886 NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 + + D+A + +P + E Q +Q + Sbjct: 1081 KSFLSGDEAFGYAQYVIKWEQIPIDKRSHLMRERQEHFQKQRIE 1124 >UniRef50_C8NER5 Exonuclease RexB n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NER5_9LACT Length = 1190 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 117/1114 (10%), Positives = 296/1114 (26%), Gaps = 210/1114 (18%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG-----------I 56 N+ ++ ++ + F +V +M + + G Sbjct: 14 NKSKMIAERFSNWLKEKETHQVF----YIVPDHIKF-TAEMEMIRNVGELLSNSTNRSYA 68 Query: 57 AANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLT 116 + + +W + ++++ K+ + + LL+ L Sbjct: 69 STRLQVYSFKRLLWYLLRN-------------EAITEKI-----SISKVGIAMLLKSILE 110 Query: 117 DDSDKRKLF-------QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLG--EAQAWQAP 167 + SD+ LF + + + +++ + + Sbjct: 111 EHSDELLLFKNEARHKGFLEQLSKVMNEFQSGGIEIEDFSSFFEATNPTENEKRLKEFGI 170 Query: 168 LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQAL 227 +++ YT+ L Q H+ Y + + S + I + L ++ + Sbjct: 171 IYR---YYTNALKQDFVHQEESYAQLCSVIASKDLSNTF----IAIDEMVTLSKAEMEVI 223 Query: 228 QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF 287 +AL + + L + + Sbjct: 224 EALVGSG---------------------------------ATVEFHATLTTYGVHTAKNE 250 Query: 288 NSDGEQDVGNPLL---ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE 344 D LL + W G D ++ E+++ + F + + ++++ Sbjct: 251 IGDSLFTSNRILLERLSRWINRGDDLARIIEW-ENTESI--FDEEFKEVEQFWLETN--- 304 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 + ITF + E + ++ M++ + Sbjct: 305 -----------GGLPKVKRTPEQKIPLQKITFTKYTDEREEYQETFAQIKRMVQTG-NVR 352 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 +DI ++ +++ S +P I + + HP+++ +L ++ Sbjct: 353 YKDIQILGRNLEEN----HLFLESLLKQYAIPGFIDLSDSMEHHPIIQVLDALFAIWQYD 408 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE---------SGIRWGIDDDNVRELE 515 + D+++LL + D L+ + + + G N + Sbjct: 409 WRYADIMSLLRSEYVLWHKDDETSLKDQLQAFRQQLDETETVILANGYEGYQWTNGKPWS 468 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 + A+ + + E + L Sbjct: 469 YVEDSIDEDSKVEQTDKNTRVLLKAEQLRNELTSILLPAFKKIEQSTTTKEAVSVLYQLL 528 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 L ++ W V + D ET + ++ ++ E + + Sbjct: 529 LTLGVDQSFIYWRDVAAE------EGDVETARRQEQVWTEFIRLLDEYIYIFGEKSFDWE 582 Query: 636 LLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 L +Q + + I + +R P K+ +G++ GV PR + G Sbjct: 583 TFMMLLHTGFEQTHYNLAPSTLDELTITGMDSVRYTPKKITFAVGLSQGVMPRNIDETGL 642 Query: 695 DLMSQKP------------KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 ++ + + ++F + L+SA + LY+S +D E+ Sbjct: 643 LTDDERELFSNHLDSGRFLAPTTGQLQSVEPFVFYQLLMSATEHLYLSCAIS--KDGKEQ 700 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 S +Q L+ + N E V + + ++ E + Sbjct: 701 LVSNFIQRLLKHYELEEIDGSFNRQNRLEQGDFVVPYELFTTLLLKMRENKFKEKEEIDF 760 Query: 803 AREWLPAASQAGKAH--------------------SEFVQPLPFTLPETVPLETLQRFWA 842 + +P + + + + ++ ++ Sbjct: 761 LWKLIPHLLKVDATFSANYHALLASVFRLNVASKLPLSLAQELYGNQLNLSTSQIETYYK 820 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF---- 898 P F Q L++ R E F L + + + + +++ +A + Sbjct: 821 DPFSHFLQYGLRLKERQE---------FELSPANTGEYFHEFFDQFIKELNARGISLRDL 871 Query: 899 --------------------RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG 938 + A + +T Q L + +A Sbjct: 872 TLEQKLAIEKDIFNRMKDNPKFAILASSRRLNFVQGLLHQTLMQTTNALQKQALALETKP 931 Query: 939 QSMEIDLACNG-------------VQITG---WLPQVQPDGLLRWRPSLLSVAQGMQLWL 982 E+ +G + + G + +Q D + ++ Sbjct: 932 WMTEVVFGTSGNYPIHIPIGHNQSIHLRGKIDRIDLLQADNGIFNGIIDYKSSEQKFEIA 991 Query: 983 EHLVY---CASGGNGESRLFLRKDGEWRFPPLAA 1013 + + S +R + PL A Sbjct: 992 KLIAGVQIQLLTYLKVSEEIIRSEKGVIPTPLEA 1025 >UniRef50_Q11Q08 DNA-dependent ATPase I and helicase II n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11Q08_CYTH3 Length = 1041 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 115/978 (11%), Positives = 254/978 (25%), Gaps = 189/978 (19%) Query: 57 AANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLT 116 A + F + L F + L + E E L + + Sbjct: 93 AYRVHVYTFHGFCNQVIQENL------DYFG--------VRNLQPISELETIELYQKLID 138 Query: 117 DDSDKRKLFQLSSKA-------ADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLW 169 + KL + +LF W + L Sbjct: 139 NFDATSKLKRFKGDIYYDQIGLKELFKNMKS------EGWSEESMY-----------ILI 181 Query: 170 KALVEYTHQLGQPRWHRA---NLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQA 226 V+ + ++ R N + + L + + + A Sbjct: 182 DRYVDELKDDPEHQYKRKSGNNNKGDLKASYYTEIEKMAKLKAAIAEF------ANFNAA 235 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 + A+ ++ ++ ++ L R + ++ + +E L Sbjct: 236 MGAIRRYDYNDMILW----VLKAFKENELLLRNYQERYQYILVDEYQDTSGSQNEVVDLL 291 Query: 287 FNSDG---EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL 343 + VG+ + + G + ++ + + L ++ + Sbjct: 292 ASYWERPNLFVVGDDDQSIYRFQGANIKNIIDF-----------NSKYNPALIVLKENYR 340 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPLDSSIT-------------FHVCHSPQREVEVLH 390 + A + + + + + LD +T ++ E + Sbjct: 341 STQAVLDASMAVIKNNNERLVNSVQGLDKQLTAKGIIAASHVEPKIIEYYNELHEEASVV 400 Query: 391 DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 ++L + + ++ V+ + I R +P I P Sbjct: 401 EQLEKLHH--EGVDLSEVAVIYRKHSKVADII-----KVLEKRKIPLNIKQSINVLHLPF 453 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 ++ I +L+ D EE L L + Sbjct: 454 VQNLIDILAYIQKENEYPDS---------------GEEQLFRLMHF-------------- 484 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 T ++R + SA + + +E + L + + SL Sbjct: 485 -----EYFNIDPTDIANISRKTRRTSESSAIRWRELMSKKEELAKLNLHSLPSILSLEAN 539 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG-LGAQYG 629 L W++ L+ +E + Q Sbjct: 540 LTYWQKEFHNI-TLQVLFEKITTRGGILSWIMNSSEKTWYM--QVLTTFFDFLKEETARN 596 Query: 630 DAVPLSLLRDELAQRLDQER----ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 + L + + LD + VN T + + ++ V L+G N + Sbjct: 597 PLLSLKEFLSTIQKMLDNDVRLNLQKIIHAEKGVNFVTAHSSKGLEYRYVFLIGCNSRQW 656 Query: 686 PRQLAPL-GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 Q GF + S + + + +D+R LF AL A++ LYISY + + + E Sbjct: 657 EGQAERSFGFKIPSTITENVEHDKEEDERRLFYVALTRAKEYLYISYPAKDVNE-KELVC 715 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 S + EL + ++ + + ++ +P Y +SY Sbjct: 716 SRFLVELTE--QETTKTTFVSLSDDAIVQYKLDILQFTEPPVIPLIDAVYLTELLESYQ- 772 Query: 805 EWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 + + L ++ + P+ +F+ L V S Sbjct: 773 ---------------------------LSVTHLNKYLSCPIAFYFENMLMVPSARTASSG 805 Query: 865 PDTEPFILEGLSRYQINQQLLNALVEQDDAER---------LFRRFRAAGDLPYGAFGEI 915 + L A+ L F+ + F I Sbjct: 806 ------------FGTAIHEALKDFFAAMLADEEKRFPTVQYLSEVFKLKLKNVHSHFTLI 853 Query: 916 FWETQCQE-----MQQLADRVIACRQPGQSMEIDL---ACNGVQITGWLPQVQPDGLLRW 967 ++ + +L + I + +E + GV I G + +++ G Sbjct: 854 EYKNYETYGSTVVLPELYETYIGEWEKNVLLEHRIDNVEYKGVPIKGNVDKIEIHGS-DV 912 Query: 968 RPSLLSVAQGMQLWLEHL 985 + + L Sbjct: 913 NVIDYKTGKYASSKSKLL 930 >UniRef50_A6NVW2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVW2_9BACE Length = 1118 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 128/1072 (11%), Positives = 267/1072 (24%), Gaps = 161/1072 (15%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG--IAA 58 ML + M + P ++++V + ++ L G ++ Sbjct: 1 MLNLLLGRSGSGKTTAMLRRIGESGGVRP---QVLVVPEQH-SHDMERRLCAIGGNQVSR 56 Query: 59 NIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 + +F + + L + L+ Y Sbjct: 57 YAEVLSFTRMAGRVFTVTGGLAAPTLDAGGRLLLM--YAALQAVAGE-----LKVYGRPS 109 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLG-EAQAWQAPLWKALVEYTH 177 L L + D V W G +G + + ++ A T Sbjct: 110 RKPEFLSGLIATV-DELKSCCVTPKHL---WTAGEEADGPEGDKLLDLSLIYGAYEALTA 165 Query: 178 QLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISAL-PPVYLQALQALGKHIEI 236 + R R E LE + V++ G + P L L + + Sbjct: 166 RRAADPRDRVT---RLAEGLEKSGWAK---GMDVYLDGFTDFTPQETLVIKALLKQANSV 219 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 + T + D A + R Sbjct: 220 TVALT------CDSLDDERDSAGIFAPARHT----------------------------- 244 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 R + L + + + + +E Sbjct: 245 ----------ARSLLRLARENGVPARTEIQENRAKEGP---------------EELAFLE 279 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + P + I+ SP EVE +L ++ ++ RDI V ++ Sbjct: 280 AHLFDAPETPWAEKPAHISLFKAGSPYAEVEYTAGEILRLV-QEEGYRFRDIAVTARSME 338 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y I+ +F +P ++ P+L S L+ + +D+ L Sbjct: 339 GYGELIETIFARY----GVPVFLAKMSDILQKPILALITSALAAVAGDYQYDDLFRYLKT 394 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 + ++EE L + + +R G + + G LL Sbjct: 395 GLTG----VSEEDRDLLENYALKWDLR-GSRWTQKGDWTMHPKGYGLPVRPEDEALLARL 449 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 + + ++ L + + LEE ++ Sbjct: 450 NAVRRQVIAPLEELRKNPDHTGLGHTK------ALYAFLERIGLPERLEERTAALQE--- 500 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 + + + + + + + L Q + ++ Sbjct: 501 ---RGEPALAQEYSQLWDILCNALEQCAQIVGDTPMEADEFARLFSLVLSQYDVGAIPVS 557 Query: 657 -GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK---------PKRGDR 706 V + + K V LLG +DG P+ G + Sbjct: 558 LDRVTAGEMPRLAHKHCKAVFLLGADDGAIPQAAPSPGLLNDDDRSLLASYGLELAPTLT 617 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA 766 + + + + E A ++L +S+ E+ P+ L+ L + Sbjct: 618 EKLNRELTIVYETCALAGERLSVSWAAM-GSGGEEQRPAFLIPRLRGLFPA-LRPVTEAE 675 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 L + + L E AA S + Sbjct: 676 LEGAFRLSAPRPALELAGRYPEAAQALRAMPEYAPLVERMEQAAGLTRGKLSRAAVDALY 735 Query: 827 TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE-IPDTEPFILEGLSR-------- 877 + + ++ + F Q L+ R + P+ F+ L Sbjct: 736 GSRVPMSASRMDKYKSCHFSYFMQYGLKAEPRKKAGFQAPEYGTFVHYVLEHVFQSEEWR 795 Query: 878 ---YQINQQLLNALVEQDDAERLFRRF--RAAGDLPYGAFGEIFWETQCQEMQQLADRVI 932 ++ L+AL ++ + A + + + ++ +A+ + Sbjct: 796 DENGGVDGDKLDALTDEIVERYIKEELGGLAEETPRFRYLFQRLLKPVRAVVRNVAEELS 855 Query: 933 ACRQPGQSME-----------IDLACNGVQIT-----GWLPQVQPDGLLRWRPSLLSVAQ 976 A + E ++L +GV I+ + DG L R + Sbjct: 856 ASDFKPIAFELGFGSGKDLPPVELEVDGVTISISGFVDRVDGWVKDGRLNLRVVDYKTGR 915 Query: 977 GMQLW--------LEHLVYCASGGNGESRLFLRKD----GEWRFPPLAAEQA 1016 L+ L+Y + LF + G P A A Sbjct: 916 KSFDLTDVWNGMGLQMLLYLFTLQKEGRDLFGGHEIDPAGVLYLPARDAVIA 967 >UniRef50_A5FDD0 ATP-dependent DNA helicase, Rep family n=2 Tax=Flavobacteriaceae RepID=A5FDD0_FLAJ1 Length = 787 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 78/616 (12%), Positives = 164/616 (26%), Gaps = 99/616 (16%) Query: 187 ANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRY 246 +N +E L SR+F + L Y L L Sbjct: 152 SNYLGYILENKGFEPDPSDSLSSRIFQIYLDKLKRNYALDFDDLIHFTAFILDH------ 205 Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGK 305 +P L K ++ + L VG+P + Sbjct: 206 ------NPDVLLKWQQNLHYIQVDEAQDSSENQFHLVEILSRVHQNLFLVGDPDQTIYEW 259 Query: 306 LGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSD 362 G YL+ F + PD + + N G +I + Sbjct: 260 RGAKPEYLVE----------FDSMFPDTQTIIMNRNYRSTPNILKIGNHIIKNNTVRVDK 309 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 + P + + E + + + +L+ + DI ++ + Sbjct: 310 DMITDKPEGFEVVHFHGKNDFEESQWIASEIKEILQAEQ-AAYSDITILYRSN-----HL 363 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 A +PY+I ++ +SLL L + L + + P Sbjct: 364 SRNIEQALIKDNIPYSIFGGIRFFERKEIKDVLSLLRLIVQG-DNFSFLRMHNHPA---- 418 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH-TWRFGLTRMLLGYAMESAQ 541 G+ + L L A Q+ + L R + + Sbjct: 419 ---------------------RGLGKKFLERLSLLAGEQNLSLLQALERNITDKELAKKG 457 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 L + R + + + + Sbjct: 458 AV----------------------EFLELIAELRETAKTKSISDLVKIILDKSGLSELYR 495 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 E + I++ +++ L + V + E++ D V + Sbjct: 496 KDGDEDRLENIKELVNSML--LLEKENNAPVDIIEYLQEISLYTDLNT--DTENQDKVKL 551 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 T+ + + F V L G +GV P + ++ R +++R L A+ Sbjct: 552 MTIHISKGLEFPYVFLCGFTEGVLPSA------LSVKERRARA----IEEERRLMYVAVT 601 Query: 722 SAQQKLYISYI-GRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD---ESEARVK 777 A+++ Y++ G + ++PS + E+ D + + +S +++ Sbjct: 602 RAEKRFYMTDSEGFNFTTGLNKYPSRFLFEIKDEFYVRKGKLSQQIIENSRNHQSPGQLQ 661 Query: 778 AHLTCLHTRMPFDPQN 793 + P Sbjct: 662 ENTAFKEGDFVMHPVW 677 >UniRef50_Q89A21 ATP-dependent DNA helicase rep n=2 Tax=Buchnera aphidicola RepID=REP_BUCBP Length = 670 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 77/600 (12%), Positives = 175/600 (29%), Gaps = 79/600 (13%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 + Q + + +V + ++ I ++ CP + +++ I Sbjct: 109 DEQDQISILQEIVSKEDRS------FVRQIRQSISNWKNKLLCPNQV-NKISNSSIEFKF 161 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 Y + A K I + + + + ++ + F Sbjct: 162 FRYYELYNAYLKSSNILDFDDLIFLPTILLRDNKLSRERWNDKIKYLLVDEYQDTNFIQY 221 Query: 281 ENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQ 339 + L + VG+ + + G + ++ P+ +Q Sbjct: 222 KLIKLLSSKRSNFTLVGDDDQSIYSWRGANIHNF----------ESLKHDYPNLRTIIMQ 271 Query: 340 SDILE---LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 + + A A ++ + S + + + E V+ L+ + Sbjct: 272 HNYRSSGRILKVANALISNNLHFFNKKLFSNLDYGSIVEIISAKNEEDEARVILQTLM-L 330 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + + +D ++ + +F +PY I + S P ++ I+ Sbjct: 331 HKSNYNAQYKDYAILYRSN-----YQVKIFEKFLIKFKIPYKILANISFFSRPEIKDLIA 385 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 L L + + L +++ P+ I L+ L++W + + Sbjct: 386 YLRLIINPDDNAAFLRVVNRPL----RGIGAVTLQKLKEWSKKRNQSF------------ 429 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 + GL +L + ++S Q + L Sbjct: 430 ---FMASLDIGLESILPVHNLKSLQEFVYLIQTISYQIQLNP-------------IEVLE 473 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ-AIIAEGLGAQYGDAVPLS 635 L E+WL + + I + + I+ +S Sbjct: 474 KLVATIKYEKWLMRSLKFSKLYVASIKNISIVLNWIINELKYKIMNSKKFVMKYLIDIIS 533 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 L L+++ V + TL + + F V ++G+ +GV P Sbjct: 534 EFI--LQNSLNED---IVINNDYVQLMTLHASKGLEFLYVFIVGVEEGVLPYYRNTT--- 585 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELID 753 + D++R L + AQ+KL++SY + Q PS ++EL Sbjct: 586 ---------MENNIDEERRLAYVGITRAQKKLFLSYAIQRCQYGVVINTKPSRFLRELPQ 636 >UniRef50_C0QC97 PcrA1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC97_DESAH Length = 619 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 67/540 (12%), Positives = 154/540 (28%), Gaps = 91/540 (16%) Query: 221 PVYLQALQA-LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 + +A L I L + R + P + + ++ + Sbjct: 167 AYEQRLFEANLVDFDNILLKTRDILRDF------PEIQQRYKQQFTHILVDEYQDTNNLQ 220 Query: 280 SENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNI 338 E L VG+ A +G G + + L F + + + + Sbjct: 221 DELTRLLLGDHGNLFCVGDDWQAVYGFRGSNVNHFLQ----------FSNRYDNARIFRL 270 Query: 339 QSDILELENRAVAGVNIEEFSRSD--NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 + + + A + +F+ K + H S E E + RL A+ Sbjct: 271 EENYRSADEIVQAANGLIDFNADKMDKKCFSQKKGGVVEIHEFFSEGEEAEWVAKRLKAL 330 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + + I V+ F F +PY + + + S Sbjct: 331 NCKGEGIDFDKIAVVYRT-----KFCSLAFEKIFRMFKIPYRLMGAQGFFERMEILDINS 385 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 LS +++ P + GI V+++ Sbjct: 386 YLSAAQFPNDDVSFERIINTP-------------------------KRGIGPAMVKKIGT 420 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 + +M+ L ++ G L+ LL L+ Sbjct: 421 MKEEGMSLSGAARKMVQERV-------------------LTPKIHGELSKLLELLDSLWD 461 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 L + +E L + +TEA ++ + ++ + + Sbjct: 462 -LPPNQAMERVLD--GTAYFDYLKKKVKTEAEFISKKENIEQLV-----YTAREKSTILE 513 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 +E A + ++ + V + T+ + + F V ++G + ++P + Sbjct: 514 YLEE-AALIREDTKDEDDDGEGVALLTIHSAKGLEFDTVFVVGCEEKLFPHWRSID---- 568 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 ++R L A+ A++ LY+S+ + + S + ++ + + Sbjct: 569 -------AGEQAIQEERRLMYVAMTRAERFLYLSHA--NYRKGQFAMRSRFIDQIEECMA 619 >UniRef50_A9WPI8 ATP-dependent DNA helicase n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WPI8_RENSM Length = 1080 Score = 204 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 128/972 (13%), Positives = 247/972 (25%), Gaps = 145/972 (14%) Query: 121 KRKLFQLSSKAADLFD----QYLVYRPDWLAQW-----ETGHLVEGLGEAQAWQAPLWKA 171 + + +QL+SK + +D +Y + E ++ + + W A L Sbjct: 132 QAQCWQLASKIVEAYDGDLSRYSGASSTLVQAVISLASECAEHLQNPRDVETWLAALRDE 191 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 G+ A + L+ + L AL Sbjct: 192 FEALPLNTGKG-RGPAGKALELADRLDIRAHVAQMVQQY-------QLAKSQRNALDYGD 243 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-D 290 L N P + + R ++ + LF + Sbjct: 244 LVALAAKLALNV----------PEVAEQERLKHRVVLLDEFQDTSHAQLTLFAALFGAGH 293 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD--ILELEN- 347 VG+P + +G G L L ++ ILE N Sbjct: 294 PVTAVGDPHQSIYGFRGASAGQLFR-FPGIFRRADGQPAETAALTVAWRNSLSILESANA 352 Query: 348 -------RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 RA G S + + + E + + DR+LA Sbjct: 353 MSSELNRRAEQGHAESSTQLSPLQPRPGAPRGEVELSRFGTENEEAQAVADRILAR---- 408 Query: 401 PTLTPRDI--IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 ++ +D+ ++ + +A + + Y I + P + +S L Sbjct: 409 RSVRSQDVSVAILCRRRTQFQ-----ALQTALEAQNIDYEIVGLSGLLATPEVIDVVSTL 463 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + S+ ++ L+ AR+ I + L L W + Sbjct: 464 RVLVDPTRSDALMRLM----TGARWRIGSKDLMALADWSKFLVASAKRARKASPTVIDDV 519 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + + + Y +SA+ A + L +L +L RR + Sbjct: 520 AEAASLIEAIDALDADYWPDSAREL-------------SATGLQRLLALRDELRTLRRFV 566 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG-DAVPLSLL 637 + L + + A+ + A + V + Sbjct: 567 GDD--LLSLISEVERTILLDIELAAKPGISYHRARHHLDAFQDAASSFLQSAERVDVLAF 624 Query: 638 RDELAQRLDQER----ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL- 692 L+ +E + +G V + T+ + + + V + G+ +P A Sbjct: 625 LAWLSAADGEEGGLEMLPVEPKSGAVQLLTVHAAKGLEWDEVYVPGLATKSFPSDRADHW 684 Query: 693 -------GFDLMSQKPKRGD-----------------------RSRRDDDRYLFLEALIS 722 + L + + ++R L A Sbjct: 685 GTGNRALPWPLRGDRADLPEWKLQGEDQRTWIGELAEFTESVKDHALQEERRLAYVAYTR 744 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS----HYLPGDEALNCDESEARVKA 778 A+ L +S + + S + EL+D Q + L Sbjct: 745 ARSFLAVSTSKFAGTSVRAKEISPFLTELVDVAEQESAASYGLGFRHWPAEQHLPEENPE 804 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQ 838 + + PFDP + E L + A Q + P + L L Sbjct: 805 REAVIRAQWPFDPLAGPYLKIGEKVVEPLGSRRA---ALLSAAQRVQAARPSELSLPELS 861 Query: 839 RFWAHPVRAFFQMR----------------------LQVNFRTEDSEIPDTEPFILE-GL 875 W + + R L+VN ++I P Sbjct: 862 ARWGIEAKRLLEQRTVRKQVIDVELPTHISASTLVELRVNPAAVVAQIRRPVPRKPGLAA 921 Query: 876 SRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACR 935 + + + + L AA D E + + A A + Sbjct: 922 RKGTAFHAWVESYFGRAGQLDLGEFPGAADDFVE---DAYQLEQLRENFE--ASEWAAKQ 976 Query: 936 QPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ-----LWLEHLVYCAS 990 + I+ GV + G + V D W Q + L Sbjct: 977 PSEIEVPIETKIAGVVVRGRIDAVFQDADGGWELVDWKTGQLPKGKELGDRSVQLALYRL 1036 Query: 991 GGNGESRLFLRK 1002 G + + K Sbjct: 1037 GWARLKGIAVEK 1048 >UniRef50_Q8D2T2 UvrD protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D2T2_WIGBR Length = 719 Score = 204 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 52/502 (10%), Positives = 136/502 (27%), Gaps = 79/502 (15%) Query: 267 HSFEDRELPLFRDS-ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDA 325 ++ + VG+ + +G G + Sbjct: 217 ILVDEFQDTNDIQYSWIKNFSSKECFIMIVGDDDQSIYGWRGAKSENM----------KN 266 Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSP 382 F++ + +Q + N A ++ IT + ++ Sbjct: 267 FINDFSRTKIIKLQQNYRSTNNILQAANSLIMNNNLRIGKKLWTEKKSGDLITIYQAYNE 326 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + E + +L ++ ++ ++ L Y I Sbjct: 327 KDESNFIIKYILNNQKKLNNKK-KEYAILYRKNSQ-----SRSLEENLLKNNLKYDIYGG 380 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 S ++ ++ L ++ +++ P + I E+ L+ ++ + Sbjct: 381 LKFFSRQEIKNTLAYFRLIVNKKDDLSYERIINFP----KRKIGEKTLKKIKNISKNKKL 436 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 + + L + + Sbjct: 437 SLWESTNFFIKNNLNDAKSFSLK------------------------------------- 459 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 + L+ L + L+ + +LN + + Q+ + Sbjct: 460 NFFYLIDYLKENIKNLSLHEKFNFVIKK-SGLLNFYEKEKKNINNSRIDNWQELVNSAKQ 518 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PVNICTLMPMRSIPFKVVCLLGMN 681 + L L+ ER + + + TL + + F +V ++GM Sbjct: 519 FFIENNKEKNILEKFLAF--STLESERYTSYDDENYKIKLMTLHSSKGLEFPIVFIIGME 576 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS- 740 +G++P + + + +++R L + A +KL I+Y+ Sbjct: 577 EGLFPNIIYSNN------------KEKLEEERRLAYVGMTRAMKKLVITYVKYRNIYGKI 624 Query: 741 -ERFPSVLVQELIDYIGQSHYL 761 +R PS ++E+ + + Y Sbjct: 625 IKREPSRFIEEIPSHYKKIIYE 646 >UniRef50_A8TD22 UvrD/REP helicase n=2 Tax=cellular organisms RepID=A8TD22_METVO Length = 1085 Score = 204 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 60/529 (11%), Positives = 154/529 (29%), Gaps = 40/529 (7%) Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLE 318 KL R ++ + F + +L +D V + + G Sbjct: 231 KLQDRYDYILVDEFQDTNFAQLDLITKLVKNDNLTCVADDDQCIYRFRGAYLTN------ 284 Query: 319 SSQELDAFVDVTPDNLLHNIQSDILELENRAV---AGVNIEEFSRSDNKRPLDPLDSSIT 375 + + P + + + + + + D I Sbjct: 285 ----IKELNYIYPALEKITLDVNYRSTDEIVELSKELIQNNPNRENKESKAHDGNGEKIK 340 Query: 376 FHVCHSPQREVEVLHDRLLAMLE----EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 E E + + + ++ +D T P+DI ++ I + A Sbjct: 341 ILKTPDDYSEAEWVAEEIEKLISTKNDDDLTYEPKDIFILTRTIKDGKKY-----SEALK 395 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +R +P Q P+++ ++ +++ + F S + R + E ++ Sbjct: 396 NRMIPSEYIGNHNLQEQPIIKDVLAYINVVSNPFESGVDFKRIFT-----REGVDEHDIQ 450 Query: 492 YLRQWVNESGIR--WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ---S 546 + Q E + G ++ + E Sbjct: 451 KINQKAKELSYKNAEGDGIYYTLQMLYTNEYNEYNEYNKDNKDNKDNNEELDTLTNSNVD 510 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 + + +++ + + +L +++ L L D+ D + Sbjct: 511 LNLNLDLEDKNKDILLKIFENIKELICYKKNHKPSDTLIYLLNKKTDIYKIEAYNDTKLS 570 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + ++ + + +S + L+ L+ ++ ++ + V I T+ Sbjct: 571 RKNIHLLNSLVNVVEDFEETSNLEFENISEYLNILSN-LEIQQENEFDNSNTVKIMTIHQ 629 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK-------RGDRSRRDDDRYLFLEA 719 + KVV + + D P + F + + K ++++ L A Sbjct: 630 SKGKEAKVVFIGDLADRHLPLRYNSKEFTVPVELMKSRIKNNVPEKELHKEEELRLLYVA 689 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 + A +KLY+ Y R + + PS ++ + + + Sbjct: 690 MTRAMKKLYLVYPKRYTGNKRDVKPSEFLEYINHIYNEKVEFIESKPFE 738 Score = 52.3 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 10/170 (5%), Positives = 37/170 (21%), Gaps = 23/170 (13%) Query: 827 TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN 886 + + + P+ ++ L + + S ++ Sbjct: 842 NPDMAFSPSKIVDYDSCPLMFKYKNVLSIPTPKK------------SYFSVGNTVHKIFE 889 Query: 887 ALVEQDDAERLFRRFRAAGDLPY-----GAFGEIFWETQCQEMQQLADRVIACRQPGQ-- 939 L ++ + A L + ++ Q + + + Sbjct: 890 ILGDKKINDERITIEMAQNMLLENLKEQDFDSKTEYDEQMTNCLNMLNYWFEFEKNNVDK 949 Query: 940 ----SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL 985 + + I G + ++ + + + L Sbjct: 950 IISVEEKFSINLCNHTINGIIDRIDKTTDDNYIVLDYKTGKTALSKNKLL 999 >UniRef50_B0SSS8 ATP-dependent DNA helicase PcrA n=6 Tax=Leptospira RepID=B0SSS8_LEPBP Length = 678 Score = 204 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 58/541 (10%), Positives = 153/541 (28%), Gaps = 79/541 (14%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIY 312 P A + ++ + E + D VG+ + + G + Sbjct: 204 PEIAAYYQRKHEYFLVDEFQDTNQLQYEFLSLFRGNSDNLCVVGDDDQSIYAFRGSNVQL 263 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDP 369 +L+ F P + + + A ++ + + P Sbjct: 264 ILN----------FEREFPHAKVVRLLENYRSTSLIIQAANSLIQNNIGRKEKTLYSRIP 313 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + ++ + E + R+ +L ++ ++I ++ P F Sbjct: 314 SAERVEYYETADEREEAIFVAGRIQTLLIKNE-FKGKEIAILFRTNFQSRP-----FEEE 367 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +R +PY + + IS L + +L +++ P + I Sbjct: 368 LRNRSIPYKVVGGYNFFDRKEIRDCISYLRYVANPKDDYSLLRIINYP----KRGIGPGT 423 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 ++ L++ T + + +M + Sbjct: 424 MQKLQE--------------------EAFTHKLSLYEIFHKM---------------IES 448 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE-EWLPVCRDMLNAFFLPDAETEA- 607 D + A++ + + ++ +++ A + L + + + ETE Sbjct: 449 PDYLPEVKAKVRQEIYQFVEMVDAFKKKFAMSQKLAPVLREMITQIGFEREISMEETEEK 508 Query: 608 ----AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 + + + + + L ++ E V + T Sbjct: 509 VVKARIYNLSELVNMLSFFEEEEGREGKATIFDFLQRLVLLMEDEPKEDEEDR-RVQLLT 567 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISA 723 + + + + +V L+G+ +G+ P + + D++R L + Sbjct: 568 MHQSKGLEYDLVFLVGLEEGILPNS-----------RVIEEEGEVVDEERRLLYVGMTRP 616 Query: 724 QQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 ++KLY++ + E PS + EL + + ++ L Sbjct: 617 RRKLYLTSARTRRKFGEQIESAPSRFLNELSQDAVLFFPMETKDRDTETKNFLEELDKLK 676 Query: 782 C 782 Sbjct: 677 V 677 >UniRef50_Q7NB99 UvrD n=1 Tax=Mycoplasma gallisepticum RepID=Q7NB99_MYCGA Length = 753 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 78/614 (12%), Positives = 176/614 (28%), Gaps = 86/614 (14%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFIC-----G 215 + QA L + L++ + + + + A T + + Sbjct: 116 DEVDQAKLIEDLLKSQKYEYYYSQYTDFKKNKVMSIINDAKTYNLDVAEFLASDLNKLGE 175 Query: 216 ISALPPVYLQALQALGKHIEIHLLFTNPCR-------YYWGDIKDPAYLAKLLTRQRRHS 268 L P +Q L E L N Y + DP L K R Sbjct: 176 DHILTPNLVQPLSNFYHDYEKALKELNAIDFNDLLNIAYNLFLNDPIILKKWQNRYEAIL 235 Query: 269 FEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGR--DYIYLLSDLESSQEL-D 324 ++ + + L ++ VG+P + +G G + + + + Sbjct: 236 VDEFQDANEIQYKIVKLLREKNNNFLFVGDPDQSIYGWRGANSEIGDSIRFDFNDLVVKY 295 Query: 325 AFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR 384 + + IL L N A+ N F + D I + + + Sbjct: 296 LTQNYRS-------KQSILNLANDAIKMNNSRYFKSLLSHDLTDLGPKPI-WINFSNIEY 347 Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 + + D++ ++ T D ++ F + +PY I Sbjct: 348 QNRFVMDKIKELVAS-KQYTYGDFAILYRTN-----FSSVSLERLIKENRIPYEIFGGYK 401 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 ++ I L L D+ +++ P R I + + Sbjct: 402 FFLRKEIKDLIGYLKLVDTNND-IAFDRIINTP----RRMIGDTSIE------------- 443 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 ++ A + + E+++ L Y + S + A + Sbjct: 444 --------------------------IIKELANKKSITEYEA-LDYLDESNIKANVKKSA 476 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 + + R + + + + +L + ++ E Sbjct: 477 QNFKKMIEDLRANQGNWSVYQTINEIIKRINYYDYLNEPTKHDSVNEFIDFLNKYEKEYE 536 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 +G + ++ LA D + + + T+ + + FK V ++ MN+ + Sbjct: 537 N-DFGTKLTINDFIQNLALEGDLDNNQPNHNKNALKLMTIHSAKGLEFKNVFVINMNENI 595 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI-SYIGRSIQDNSERF 743 P + + +++ ++R + A A+ L++ S + Sbjct: 596 LPSSRSIAATNN---------KAKLAEERRIVYVAYTRAKHNLWLCSNQDYDARTKEPYQ 646 Query: 744 PSVLVQELIDYIGQ 757 PS + EL D + Sbjct: 647 PSRFLYELSDLVLD 660 >UniRef50_C8V6U5 DNA helicase and DNA-dependent ATPase (Eurofung) n=3 Tax=Trichocomaceae RepID=C8V6U5_EMENI Length = 997 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 85/676 (12%), Positives = 192/676 (28%), Gaps = 71/676 (10%) Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 + +R ++ L P +R+ + P + A Q + H F Sbjct: 116 ADSGDSLAIIRRIVKRL-QLGIQPNTARARISHQKAHGVSPDDVAAKQNKISKLLEHREF 174 Query: 241 TNPCRYYWGDIKDPA------------YLAKLLTR----QRRHSFEDRELPLFRDSENAG 284 R Y ++ L + + + ++ + + Sbjct: 175 VQVYREYESELATSNLLDYDDLLLRCAELLRKHPKCVSNVQVVLVDEFQDTNQIQYDLMN 234 Query: 285 QLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL 343 L + + VG+P + +G + L + + + ++ + Sbjct: 235 LLASWNRRITVVGDPDQSIYGFRSAEIENL----------KRMQRLYRNTEVVLLEDNYR 284 Query: 344 ELENRAVAGVNIEEFSRSDNKRPLDPL---DSSITFHVCHSPQREVEVLHDRLLA-MLEE 399 + + ++ E S + L P + S + E + L + ++ Sbjct: 285 SSGSILKSAQDVIEQDLSRPAKKLQPTHTFGTLPVLRKLPSAEDEAQWLVLEIKRCIVLT 344 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 L D +++ + SA +PY + + ++ + L Sbjct: 345 GKLLKYSDFAILLRSAS-----LSRQIESAMGKHGVPYRMVGGQRFFDRVEVKLLLDYLR 399 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + SE +L +++VP I EE ++ L ++G +V + Sbjct: 400 VISHPENSEALLRIINVP----SRKIGEETVKMLLNGAEKAGKPLWDYIKDVAQGRRSTE 455 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 + L +E ++ + + + L+ ++ L + Sbjct: 456 KAMSKPTNQGLSSLVGLIEYSREKLRQCVDRSAPRRLLEIVMKRL-----SFREFITATY 510 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 W V M A A+ ++ I + LS Sbjct: 511 GSNDENRWANVEELMSQADDATAADESEQ----DENLPEIAGLTQQESHPGEEALSRFLA 566 Query: 640 ELAQRLDQERISQRFLAGP----VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 +A + + + V I T+ + + + VV + +G+ P A Sbjct: 567 NVALSTEVQPKEETEGEDQAQEKVTISTIHAAKGLEWPVVFIPAAYEGIIPHSRAEDS-- 624 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV-QELIDY 754 D++R L A+ AQ LY+SY R ++N+E + + QELI Sbjct: 625 --------------DEERRLLYVAMTRAQALLYLSYPLRQARENAETNVTSFLPQELITS 670 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG 814 + DE + ++ + + + D ++ + P Sbjct: 671 RLRPVGPKLDEKVVYGIADILRRERPSAVAMLEGLDSLPSVYDDQWTEDGRESPGMIIRW 730 Query: 815 KAHSEFVQPLPFTLPE 830 Sbjct: 731 DGSRATDDEPSSKRRR 746 >UniRef50_D2MPE9 Putative ATP-dependent helicase PcrA n=1 Tax=Bulleidia extructa W1219 RepID=D2MPE9_9FIRM Length = 710 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 58/579 (10%), Positives = 146/579 (25%), Gaps = 87/579 (15%) Query: 213 ICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWG-DIKDPAY--LAKLLTRQRRHSF 269 I S+L ++ + + W + D L K Sbjct: 159 IADFSSLEKKKVKIYEYYLHRQKELFALDFDDLILWTVRLFDRFEVVLQKWQQHFHYILV 218 Query: 270 EDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVD 328 ++ + + QL D VG+P + G D + + F Sbjct: 219 DEFQDIDRIQYQLIKQLTGKDNSLLVVGDPDQTIYTWRGADV----------RIIVNFEK 268 Query: 329 VTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQRE 385 + + + + A + + + + I S + + Sbjct: 269 DFSNTKTILLTQNYRSTSSILKGANSVIKNNKQRVDKELFTDNQSKEKIYHFSAGSDEYQ 328 Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 + + ++ T T ++ V+ + ++ A D +PY I Sbjct: 329 AAWIAQEMKSI--RLKTGTYSEMAVLYR-----ANYLSRALEKALMDERIPYIIYGGLRF 381 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 V++ +S L L L + + + + + E Sbjct: 382 FERQVVKDALSYLRLIVVGDDLSLTRVLN-----RPKRGLGLKTVEMIAHRARELNCS-- 434 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 + + + Sbjct: 435 ----------------------------------------QFELLQKEELFKGKTQDTIR 454 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 + ++ WR + E +++ T ++++ + Sbjct: 455 QFVQRVERWRSLQQKGGL--ELFDFFELVMDESGYRAFLEAEKDTDNLGHLKSLMEDIRD 512 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 + L + L + V + T+ + + F V + +N+G++ Sbjct: 513 FSRYHPE--ATLEEYLQSVALYGDKEELVENDFVQLMTVHASKGLEFDTVFVSDLNEGIF 570 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI-GRSIQDNSERFP 744 P ++ + +++R L A A++ LY++ G S + P Sbjct: 571 PS-----------ERSLQEGYHGVEEERRLAYVAFTRARKHLYLTDAGGYSFMLQRVKTP 619 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 S + E+ D + + + ++ Sbjct: 620 SRFIDEIEDLYIEHRGVVKSQEKQESSFYSQFMEKPVRE 658 >UniRef50_A1BEA2 ATP-dependent DNA helicase PcrA n=2 Tax=Chlorobium RepID=A1BEA2_CHLPD Length = 734 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 74/568 (13%), Positives = 154/568 (27%), Gaps = 85/568 (14%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIY 312 P L L R ++ + A L VG+ + + G D Sbjct: 204 PMVLEALQDTFRYLLIDEYQDTNKAQYLAAKMLSAKHRNIFVVGDDAQSIYSWRGADISN 263 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS---DNKRPLDP 369 +L+ F D D L + + A ++ + Sbjct: 264 ILN----------FQDDYTDALTFKLVENYRSTGTILQAANSVIRNNLRQIKKELVSHRS 313 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 +T + + E E + + + + + R V V Sbjct: 314 AGDPLTLIEARNERHEAEKIGEYI-HSIRIEKGYEFRSFAVFYRTNAQ-----SRVLEDL 367 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY I + ++ ++ L + SE +L +++ P I E Sbjct: 368 MRQNRIPYKIFGSVSFYKRKEIKDAVAYLRFLLNDRDSESLLRIINFPP----RKIGETS 423 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + LR++ GI T +TR G + Sbjct: 424 IGKLREFAEAEGI--------------------TLYEAITRADEGQFQSRLVNSLKGFS- 462 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 L R LA+ + L + + L E A Sbjct: 463 --------------------SLIEALRLLAETGTVYAVLTELFSLTSIPLLLKEENTAES 502 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVP--LSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + Q +++ + L + ++ L + V++ T+ Sbjct: 503 LARHENLQELLSMARDFSDNNPDQGSLGDFLETIS--LASNYDESQDSDNYVSLMTVHAS 560 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F VV + G+ + ++P + + +++R LF A+ AQ+K+ Sbjct: 561 KGLEFPVVFITGLEERLFPLNCY--------------EPEQLEEERRLFYVAMTRAQEKI 606 Query: 728 YISYIGRSIQDNSERFP--SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 ++S+ ++ S+ + E+ I ++ + Sbjct: 607 FLSWAQTRYLYGQPQYCLKSMFISEIDSSIVKTESGTVLADRKERQGTRNAVPESGGYRQ 666 Query: 786 RMPFDPQNYQPGERQSYAREWLPAASQA 813 R R+S RE Sbjct: 667 RPAGAVSAPSQKPRESGLREGSTVHHAV 694 >UniRef50_C3JBX6 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=C3JBX6_9PORP Length = 809 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 57/544 (10%), Positives = 142/544 (26%), Gaps = 98/544 (18%) Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQR--------RHSFEDRELPLFRDSENAGQL 286 + + + L + + ++ + A +L Sbjct: 182 YVAQCRQANAMDFDDLLYYFNILLRDHPEVQAECAASVDYLLIDEYQDTNPSQYLIARRL 241 Query: 287 FNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL 345 + VG+ + + G +L F P L ++ + Sbjct: 242 VEAKQRIFAVGDDAQSIYSFRGASMQNIL----------TFTHTFPSARLFKLEENYRSS 291 Query: 346 ENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 + ++ E + I + S RE + + + + + Sbjct: 292 QRIVALANSLIEHNVHRIKKDVFSNRAKGEKIDLYEMESGYREAQHVVESIYKRYCKHSE 351 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 + ++ +F +PY I A S ++ ++ L L Sbjct: 352 TSYGSFAILYRTNAQ-----SRLFEDQLRQAGIPYRIYGGIAFYSRAEIKNVLAYLQLIA 406 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + +E P R I ++ L Sbjct: 407 NPHNNEAFERAAKYP----RKGIGDKTLS------------------------------- 431 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 ++ A ++ + + ++ + ++L + + Sbjct: 432 --------LIRTEAADNKTSLFAAAESLIARPDTLSSTARTKLTAYLELIRDITYNPEAK 483 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG-----------DA 631 L EW+ A+T + ++ + + Sbjct: 484 TLVEWVQSILLRSQILDTLRADTSIEGHTQLENVNEFVSGVQEFEDETSADGLFFERGET 543 Query: 632 VPLSLLRDELAQR--LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 L L Q L + + A V++ T+ + + F V ++G+ +G++P L Sbjct: 544 TSLHDLLVLFLQGVTLITDNLETGENADAVHLMTIHAAKGLEFDHVYIVGLEEGLFPSML 603 Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVL 747 + ++ + R L A+ A++ IS+ + PS Sbjct: 604 SAEEENIEEE-------------RRLLYVAITRAKEYCSISFARYRAINGMTEYMIPSRF 650 Query: 748 VQEL 751 +++L Sbjct: 651 LRDL 654 >UniRef50_Q98PF5 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma pulmonis RepID=Q98PF5_MYCPU Length = 741 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 56/516 (10%), Positives = 148/516 (28%), Gaps = 74/516 (14%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIY 312 +P K ++ ++ + E + + VG+P + G D Sbjct: 221 NPKVRKKWESKFEYVLVDEFQDTSPLQYEILKVIAKNAYLTIVGDPDQTIFWWHGADINI 280 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLDP 369 L+ F P+++ ++ + + + A + + + N Sbjct: 281 FLN----------FEKDFPESMKIKLEQNYRSTKKILDAANKLIAKNKRRLTKNLFTEKE 330 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 +I F+ + E + ++ + ++ + ++I+++ + Sbjct: 331 EGEAIEFNHAFNIDAEARWVVTKINMLKKQ--KVQLKNIVILYRS-----SHVSRALEQQ 383 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + + I + ++ I L +L + ++ Sbjct: 384 LVKENINHQIVNGTKFFEKKEIKNLIYFLKTI-----YSANTLAFYNTLLFFVRSLAKKD 438 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L + + + + Sbjct: 439 LDEVLHQAAAAKLSLYKYIITRIK------------------------------------ 462 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA--FFLPDAETEA 607 E+ GL A+ SLL + +++ L E+ + + L F+ Sbjct: 463 -TENLGLSAKTRKETISLLKTIVKFKKLLKNEKHEANYSWIFDAFLKEVKFYDLINYDRD 521 Query: 608 AMTLIEQQWQAIIAEGLGA-QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 I+ + + + LS +++ L RI + +++ T+ Sbjct: 522 DENAIQDNVYEFLTLLQKWQEENPSSELSKFFEDI--ALYSNRIDESAGNNFISLMTIHN 579 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F V ++G+N+ + P A D + +++R + AL A+ K Sbjct: 580 AKGLEFDYVFIIGLNENILPSAKALYSKDGSINY------DKLEEERRIAYVALTRAKTK 633 Query: 727 LYISYIG-RSIQDNSERFPSVLVQELIDYIGQSHYL 761 ++IS + S + E+ + Sbjct: 634 VFISDARGIDPYSKEPKKTSRFLTEMGISLEDHVQE 669 >UniRef50_D0L0Z4 UvrD/REP helicase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0Z4_HALNC Length = 688 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 67/564 (11%), Positives = 155/564 (27%), Gaps = 75/564 (13%) Query: 228 QALGKHIEIHLLFTNPCRYYWGDIK----------DPAYLAKLLTRQRRHSFEDRELPLF 277 +AL + + C D D A + R R ++ + Sbjct: 172 RALAGLFDQYQRQLTACNALDFDDLIGRPVELLQSDAAVRERWQARVRYLLVDEYQDTNT 231 Query: 278 RDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 E L VG+ + + G + L+ D P+ Sbjct: 232 TQYELVRLLVGKIGALTAVGDDHQSIYAWRGA----------KPENLNRLADDFPNLHRI 281 Query: 337 NIQSDILELENRAVAGVNIEEFSR---SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL 393 ++ + + + A ++ S + V + + E E + + Sbjct: 282 KLEQNYRSVNSVLKAANHLIALDTTTASKQLWSDIGMGEPHRVIVAATAEDEAERIATEI 341 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 L T RD V+ + A +PY+++ ++ ++ Sbjct: 342 LHRHFRAQT-EYRDFAVLFR-----GNHQARLIEQALRKLNIPYSLTGGQSFFERAEIKD 395 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 +S L L + L +++ P R +I + L + E ++ Sbjct: 396 AMSYLKLLVNPDDDAAFLRVVNTP----RREIGPTTIEKLGGFARERRSSLFAAARSIGI 451 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 + L G + + + ++ A Sbjct: 452 QSVFDNRAADRLNRFCDWLDGIRAQPDRDAIDVIQQVFDAIDYPA--------------Y 497 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 R + + + + L+ A E G + + Sbjct: 498 LREQESTPKAADRRWQNVEEWLDWLAKISDTQVEA-------------ESEGGESATKMD 544 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L L + ++ ++ + V + TL + + F V + GM + + P + Sbjct: 545 LPALAQRMTLLGILDQQTREKDSNAVALLTLHAAKGLEFGHVFMAGMEEDILPHRDCIE- 603 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQEL 751 D +R ++R L + A+ L + R + + PS + ++ Sbjct: 604 -----------DEARLAEERRLCFVGITRARLSLTFTLTKRRRRYGEWKDTEPSRFLDDI 652 Query: 752 IDYIGQSHYLPGDEALNCDESEAR 775 + Q ++ +++ R Sbjct: 653 PADLLQWQGEGIEQPKEVSQAQGR 676 >UniRef50_A0M3U3 PcrA-like UvrD/Rep family ATP-dependent DNA helicase n=28 Tax=Bacteroidetes RepID=A0M3U3_GRAFK Length = 787 Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 54/544 (9%), Positives = 151/544 (27%), Gaps = 87/544 (15%) Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASW 303 + Y + + + +R + ++ + D QD + Sbjct: 193 YKAYVDRCFKAGAMDFDDLLLKTNELLNRFPEVLHKYQSRFKYILVDEYQDTNHSQYLIV 252 Query: 304 GKLGRDYIYLLSDLESSQELDAFV-----------DVTPDNLLHNIQSDILELENRAVAG 352 L + + + +Q + AF + ++ ++ + +N A Sbjct: 253 RALSDKFQNICVVGDDAQSIYAFRGANINNILNFQKDYDNVQMYRLEQNYRSSKNIVEAA 312 Query: 353 VNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 +I + + I + + E + + ++ + D Sbjct: 313 NSIIDKNQTKLDKIVWTANEDGPKIIVNRLLTDGEEGRYVASSIFENKMQNQ-MDNGDFA 371 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 ++ A + +PY I + ++ ++ L L + E Sbjct: 372 ILYRTNAQ-----SRAMEDALRKKDIPYRIYGGLSFYQRKEIKDVLAYLRLILNPKDEEA 426 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 + +++ P I + + L N+ Sbjct: 427 LKRVINYP----SRGIGQTTMDRLAIAANQH----------------------------- 453 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAE-LVGHLASLLMQLNIWR------RGLAQER 582 ++ + D+ I L + + + + Sbjct: 454 ----------KISMFEVIKNIDKLELKINRGTQTKLVNFVNMIRSFAIMNETSDAFQIAE 503 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 + + + +++ + + + + G LS +++ Sbjct: 504 TVTKKTGLVQELKKDGTPEGIARIENIEELLNGMRDFVE-GQKELADATGSLSEFLEDV- 561 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 L + + V + T+ + + F V ++GM + ++P ++ Sbjct: 562 -ALATDLDNDTGDDDRVALMTIHLAKGLEFPYVYIVGMEEDLFPSGMSMN---------- 610 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHY 760 RS +++R LF A+ A+++ Y++Y + + PS ++E+ D Sbjct: 611 --TRSELEEERRLFYVAITRAEKQAYLTYTLSRYRWGKLVDAEPSRFIEEIDDQYLDLMV 668 Query: 761 LPGD 764 D Sbjct: 669 PQDD 672 >UniRef50_B1AJE0 ATP-dependent DNA helicase PcrA n=15 Tax=Ureaplasma RepID=B1AJE0_UREP2 Length = 743 Score = 202 bits (512), Expect = 8e-50, Method: Composition-based stats. Identities = 53/505 (10%), Positives = 148/505 (29%), Gaps = 84/505 (16%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIY 312 P L K + ++ + + L VG+P + G + Sbjct: 211 PEVLEKWQNKFDYILVDEFQDTNKIQYDLISLLATKHQNLFVVGDPDQMIYSFRGAEQW- 269 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDP 369 ++ F + + ++++ + + + N + Sbjct: 270 ---------IINNFSQNFKNTKVTILKTNYRSTQPILNTANRLIDANNNNYKKNLTAFNT 320 Query: 370 LDSSITFH-VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 D+++ + +P E + ++ +L + I V+ Sbjct: 321 NDNNLPIYLRGQNPIDEANWIARKIRELL--EEGTPANQIAVLFRSN-----HYSRTIEQ 373 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + +PY I + ++ I+ L + + L +++ P R I Sbjct: 374 SMMRESIPYTILGSKKFYERAEIKDMIAYLKV-VNDLDELSFLRIINTP----RRAIGPT 428 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 +++ YA+ + ++++ Sbjct: 429 TFEHVKH---------------------------------------YAINNNLFLFEALA 449 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 +++ + ++ + + + R + ++ + E L + +N + Sbjct: 450 EVEKNHLINNTQKKNILNFVNLIKEIRDEM-EDLKIHEILELIYKKVN--YEAYLLENEK 506 Query: 609 MTLIEQQWQAIIAEGL-GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + ++ + +A L+++ + V + T+ Sbjct: 507 AEDKIDNVYELKRAMKMYVDRHPDDTINDYLNSIALYLNKDGKDSKEN---VLLMTVHNS 563 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + ++ V + GMN+G+ P A + +++R + AL A++ L Sbjct: 564 KGLEYENVFVAGMNEGLLPSDRAINDDPIKGV----------EEERRIAYVALTRAKKNL 613 Query: 728 YISYI-GRSIQDNSERFPSVLVQEL 751 YIS + F S + E+ Sbjct: 614 YISSACCYDPLARRQVFESRFINEI 638 >UniRef50_A1W088 ATP-dependent DNA helicase, UvrD/REP family n=30 Tax=Epsilonproteobacteria RepID=A1W088_CAMJJ Length = 691 Score = 202 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 49/538 (9%), Positives = 142/538 (26%), Gaps = 93/538 (17%) Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 Y +A + D + + + ++ + Sbjct: 173 ANYYRAYEEYLLKQNFVDFDDLLLLSNLILENDINFAKEQSLLYNYITVDEYQDTNTLQY 232 Query: 281 ENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQ 339 + L VG+ + + G +L+ F + + L ++ Sbjct: 233 KILKNLCCMHENITVVGDDDQSIYSWRGAKIENILN----------FQNDFKNVKLVKLE 282 Query: 340 SDILE---LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 + + A ++ E +I + + E + + + Sbjct: 283 QNYRSVGTILQAANNLISHNEQRLGKTLICTKDTGENIKILKNENEKDEGLYIAQEVKKL 342 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 L + + ++I ++ + A + + Y + ++ IS Sbjct: 343 L--NSGVEAKEIAILFRVNA-----LSRAIEEAFMKKQISYKLLSGMRFYERLEIKDLIS 395 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 L L + +++ P Sbjct: 396 YLRLILNPSDDLSFKRIINRP--------------------------------------- 416 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG--LIAELVGHLASLLMQLNIW 574 + + + L YA + + ++ D G + + ++ Sbjct: 417 ----KRSIGEKALKNLEEYAKKRQISLFDALCESDGGVGILTTKKAQNEANIFIQNIHTL 472 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 + ++ + + + + +F + + + +++ + + + L Sbjct: 473 KSYDNAKKVFDNIEELFK--IKDYFSEQDDGDERIRNLDEFYANLREKLKE---DPEASL 527 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 L E++ DQ+ + + V + ++ + + F V ++G ++G +P Sbjct: 528 EDLLSEISLLSDQDNLDEE----CVCLMSIHASKGLEFDYVFIIGFDEGFFPLNSEENLE 583 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQE 750 + A+ A++ L IS S PS ++E Sbjct: 584 EERRLA----------------YVAITRAKKLLTISVANSRFYHGSRANINPSRFLEE 625 >UniRef50_A0LFK0 ATP-dependent DNA helicase, Rep family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFK0_SYNFM Length = 620 Score = 202 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 59/500 (11%), Positives = 143/500 (28%), Gaps = 82/500 (16%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 P R ++ + ++ L VG+ + + G + + Sbjct: 197 PEIRKAYRNRFDYILVDEFQDSNEIQNQIIDLLLKDGRLTVVGDDYQSIYQFRGANPFHF 256 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN-IEEFSRSDNKRPLDPLDS 372 ++ F + ++ + A I + K+ D Sbjct: 257 IN----------FPQKYAKARVFRLEENFRSTRQIVTASDRLIAHNLQRIEKQCFSRRDG 306 Query: 373 -SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 +T ++ Q E E + DR +L D + R+I ++ + P F A Sbjct: 307 QPVTVETFYNEQMEAEWVADRCRELL-NDENIPYREIAILYRTKFTSLP-----FERALR 360 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +PY + + ++ + L + +++VP Sbjct: 361 SAGVPYTMVGAQGFFQRREVQDINAYLICAVNPSDDISFERIVNVP-------------- 406 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 R GI ++++ + R + + G + Sbjct: 407 -----------RRGIGPGALKKIFGCKERNMSLRDAARKAIDGRLIPKKAAAE------- 448 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM-LNAFFLPDAETEAAMT 610 L +L +A+E+P V ++ A ++ + Sbjct: 449 ----------------LDKLLSLLESIAEEKPDAAMHRVMKETDYFAHLSTLSDDGDDLE 492 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 + +++I + + L ++ + V + T+ + + Sbjct: 493 TRLENIKSMI-----YDAAGKASIPEYLE--DAALIRDDQDETDNGNGVRLSTIHAAKGL 545 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 FK V ++ + +G+ P + + + + +++R L A+ A + L +S Sbjct: 546 EFKAVFVVAVEEGILPHRK------SIETESEIELERGMEEERRLMYVAMTRASELLSLS 599 Query: 731 YIGRSIQDNSERFPSVLVQE 750 PS + E Sbjct: 600 AAATR--RGELARPSPFLAE 617 >UniRef50_C7R1Q8 UvrD/REP helicase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R1Q8_JONDD Length = 1103 Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 115/976 (11%), Positives = 244/976 (25%), Gaps = 132/976 (13%) Query: 144 DWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTC 203 D + W+ + L A +E+L Sbjct: 165 DIVDHWQEDLDTDYAVSTMTDAVV---TLAGELADHLLTVPEAATQLDHLLESLADLPLA 221 Query: 204 PPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKL--- 260 L V G + L + ++ + + + + A LA+ Sbjct: 222 GRSLAPSVAKLGKQLATKR--RLLDLVSEYHRVK--RHSESMDFSDQVVLAAELARDHPF 277 Query: 261 -----LTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIYLL 314 R ++ + + + LF + VG+P + +G G L Sbjct: 278 VADTERRRFAVVLLDEYQDTSYAQIQLLTALFGDGHPVTAVGDPNQSIYGWRGASASG-L 336 Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSD--ILELENRAVAGVNIEEFSRSDNKRPLDPLD- 371 + + +L + ++D IL +R + Sbjct: 337 TRFPRDFPRPNGTPASIASLSTSWRNDAQILSAAHRIALPLASASALPLPTLSTRPGAGT 396 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 S+T S Q E + + D T V+ + + Sbjct: 397 GSVTVGYYLSAQDEAQGIADFFTRHFVPGMTTA----AVLCRARKQF-----PLLEETLR 447 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 + LP + P + +S+L + + ++ L + RF + + Sbjct: 448 NAGLPVEVVGLGGLLHTPEIRDLVSMLEVVHDPSRGDSLMRL----LTGPRFHLGAHDIH 503 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 L W E R R A + + L ++ + Y+ Sbjct: 504 TLGVWARELSSRAHGYSGPPRGALREAADERSIVDALAQLPPRSWQGHHGETFSE-AGYE 562 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + L A + + L + + L+ + + +A ++ Sbjct: 563 RLTQLSALIDALRQQTYLALPEFVDATERALGLDVEVALRAAHRHAETGTTDPSDPWGRA 622 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF----LAGPVNICTLMPM 667 +++++ + + L L L D+ER R +++ T+ Sbjct: 623 HLDAFRSVVTDFVHQAVHPT--LGALLAWLDDARDRERGLDRPTGHLDPHAIHLITVHAA 680 Query: 668 RSIPFKVVCLLGMNDGVYPR-------------QLAPLGFDLMSQKPKRGDRSRR----- 709 + + + +V + ++DGV+P + LG S + D Sbjct: 681 KGLEWDLVAVPALSDGVFPSTATTTPRGPTDSGWTSHLGALPFSLRGDAPDLPHLSLADA 740 Query: 710 ----------------------DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 ++R L A A+ L ++ + PS Sbjct: 741 DHDAEIARRLTEFTAQCGHYQVAEERRLAYVAYTRARTALLVTGAWWRT-GKTATPPSPF 799 Query: 748 VQELIDY----IGQSHYLPGDEALNCDE-----SEARVKAHLTCLHTRMPFD-----PQN 793 + EL+D I PGD+ + + + +T + Sbjct: 800 LTELLDIDGVQIADLVTEPGDDNPHPPDGDTAVWPQSLVDDITKRAADLVMSTRHNGRPI 859 Query: 794 YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRL 853 L ++ + + P+ V + L A F Sbjct: 860 LDHIGPVQVHGVDLAQRARQVLNVQQRPRGSSVIFPDHVSVSGLVELSAD-REGFLTQYQ 918 Query: 854 QVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFG 913 + R + R + + + +G Sbjct: 919 RPIPRQPSPQS-----------RRGTTFHLWVEQFYGHTPLFDMDDLDNTSDSDDHG--T 965 Query: 914 EIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQV--QPDGLLRWRPSL 971 + + +Q R +ID+ GV I + V PD Sbjct: 966 DRTLDELKATFEQ--SRWARLTPKELEADIDVVIAGVVIRARIDAVFDDPDRPGGVIVVD 1023 Query: 972 LSVAQGM-----------QLWLEHLVYCASGG-----NGESRLFLRKDGEWRFPPLAAEQ 1015 + QL + L + G + ++ +D L Sbjct: 1024 WKTGRAPTTDADQRHRNVQLAVYRLAWATWSGCDINDVTAAFYYVAQDLTVIPDQLPE-- 1081 Query: 1016 ALHYLSQLIEGYREGM 1031 L +L+ Sbjct: 1082 -REELERLVRHAGNIQ 1096 >UniRef50_B0KVA6 Putative UvrD/REP helicase n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVA6_9BACT Length = 710 Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 81/629 (12%), Positives = 187/629 (29%), Gaps = 111/629 (17%) Query: 163 AWQAPLWKA----LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA 218 + Q L + L + + FI L+ P L F+ + Sbjct: 118 SDQWLLLRKNLFDLKLKYFRPLGNPTKFISAILTFISRLQDENVSPEELLE--FVKHSNY 175 Query: 219 LPPVYLQALQALGKHIEIH--LLFTNPCRYYWGDI--------KDPAYLAKLLTRQRRHS 268 Q + L + L + + I P LA+ + + Sbjct: 176 TSDEEKQRWEELSYIYSEYERLKIESSAMDFGNLIIWVIKLLNVRPNILAEYKNQFKHIL 235 Query: 269 FEDRELPLFRDSENAGQLFN-------SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ 321 ++ + + E LF VG+ + + G +L Sbjct: 236 VDEFQDTNYAQYELIKLLFPTKETKESERSLLVVGDDSQSIYKFRGAAVSNILQ------ 289 Query: 322 ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP---------LDS 372 F++ D+ + + + + A + + + D S Sbjct: 290 ----FMEDYKDSKMITLLKNYRSTQEILDAAYKLIQNNNPDTLESKLGISKKLIGINSGS 345 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 + + + EVE++ ++L +L ++P T +D ++ + PF+ A Sbjct: 346 NPKILQTETLEDEVELVISKILEILAKEPQYTYKDFAILARANNHLDPFVM-----ALRK 400 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 LPY + R + ++ L + + ++ +L++ L + E Sbjct: 401 YGLPYQLVGNRGLYDRDEVRDILAFLRVIINTQDGINLYRVLNIESLEIPYKEISE---- 456 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 LL + W+ V + Sbjct: 457 ---------------------------------------LLSKSRYEKTDLWEQVKKSKD 477 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC--RDMLNAFFLPDAETEAAMT 610 +A L+ + +++ + + P E V + LN F + Sbjct: 478 E---------KVAFLVKTIEGFQKNITKNTPTEMVFEVVNSTNYLNQFLEEETIENELCI 528 Query: 611 LIEQQWQAIIAEGLGAQYGDA------VPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 + + + + + V L D + + + ++ +N+ T+ Sbjct: 529 KNLNLFLQRVQKFEVDYHNETGEMPTVVNLVDYLDMIIEAGENPAQAEIEDIDTINLMTV 588 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR---SRRDDDRYLFLEALI 721 + + F VV ++ + G +P + ++ + K ++R LF + Sbjct: 589 HSSKGLEFPVVFMVNLVSGRFPTRNQGDTIEVPEELIKETLPTGNEHIQEERRLFYVGMT 648 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQE 750 AQ+ L+++ G++ + PS +QE Sbjct: 649 RAQKYLFMTL-GKNYGGKRDTIPSGYLQE 676 >UniRef50_O31626 Putative ATP-dependent DNA helicase yjcD n=3 Tax=Bacillus RepID=YJCD_BACSU Length = 759 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 68/611 (11%), Positives = 159/611 (26%), Gaps = 103/611 (16%) Query: 161 AQAWQAPLW--KALVEYTHQLGQPRWHRANLYQRFIET---LESATTCPPGLPSRVFICG 215 WQ + KAL E + +A F + +V+ Sbjct: 242 KMEWQREQYIKKALYEEGIDEKESPVDQALQQIGFWKNTYVPNERIPLKDEWEKQVY--- 298 Query: 216 ISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELP 275 + + K Y I+ P L + +R ++ + Sbjct: 299 ------RLYEHYERQKKEHSQFDFDDMASACYELFIERPDLLEQYQSRFTYILIDEFQDI 352 Query: 276 LFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL 334 + L VG+ + + G + ++L F P Sbjct: 353 NPVQYKIMQMLASPEQNLCCVGDDDQSIYAFRGSNPSFILD----------FQKDYPGAK 402 Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITF---HVCHSPQREVEVLHD 391 + ++ + + + +++ + L+ I + + E ++ Sbjct: 403 TIYLTANYRSTHPIVSSADIVVKKNKNRYAKTLEAARDDIQVPVLFYPYDEEEEATMVVS 462 Query: 392 RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR-RARQSHPV 450 + ++ +P D V+ + +PY ++ S + Sbjct: 463 DIKEKIQN--GASPEDFAVLYRTNSGGRAIYER-----LHQSSIPYTADRGVQSFYSRRI 515 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 + ++ L + +E + LL L T + L Sbjct: 516 VRQILAYLYASQNEDDTEAIKHLLPALFLKQSALNTLKAL-------------------- 555 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 ++ +++ + + + + Sbjct: 556 -------------------------SITEDCTMIKALAKLPDLKPFQLDKIKKIVPFFAS 590 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 L +P+E + F + +E+ + + Sbjct: 591 LR-------TMKPVEAI--TFAEGKMGFSEYLKKRGNEGNKLEKGSDDLRD--IKVVAKK 639 Query: 631 AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 + + E+ V + T+ + + FK V +LG DG P Sbjct: 640 FKTIPDFLAHVDHMRAAEKNRTDE--HGVQLMTIHRSKGLEFKTVYVLGTVDGSIPH--- 694 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 D + ++GD + +++R L A+ A+Q LY+S S + Sbjct: 695 ----DFSLETARKGDEAALEEERRLLYVAMTRAKQHLYLSCPANR--RGKTANRSRFLYP 748 Query: 751 LIDYIGQSHYL 761 L+ Q + Sbjct: 749 LLQKARQPLHH 759 >UniRef50_Q38X70 ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=ADDB_LACSS Length = 1186 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 126/1092 (11%), Positives = 287/1092 (26%), Gaps = 187/1092 (17%) Query: 15 ALMEFIVERERLDDPFEPEMILVQSTGMAQW---LQMTLSQKFG---IAANIDFPLPASF 68 + ++ + P E LV + + + L A+ I Sbjct: 16 QALVTNLKATFQEKPQERYFYLVPNHIKFESEVSILEALKSDENDYVAASQIQVFSLTRL 75 Query: 69 IWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF--- 125 W +P++ L+ L + ++ +LF Sbjct: 76 AWYFMKNTP------------------YYQIPRISTAGLNMLVFRLLQEHQEQLQLFRGE 117 Query: 126 --------QLSSKAADLFDQYLVYRPDWLAQWET-GHLVEGLGEAQAWQAPLWKALVEYT 176 QL+ + +L + D A E G L + + A Sbjct: 118 VRHTGFVAQLTKQLLEL-KIGCITPADLTAMAENLGDQQVELAKKLHDLTIIATAFEAAM 176 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 + I+ L ++ G + L L + E+ Sbjct: 177 QKRFIENT-------ALIDALTLFLQQQTLTDCHFYVEGFAQFTAQEQALLTTLMQQSEV 229 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 + G I D AY + Sbjct: 230 QI----------GFILDRAYPNQQPDGL-------------------------------- 247 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 ++ Y L + +D D+ + + L+ V+ + Sbjct: 248 -----NFFFQAGRTYYNLYQQARLNHVPVMMDQMADS--QRLTPALAALDQFWVSSESPG 300 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 S + + E+ + + +++ RD +++ + Sbjct: 301 NRKLSPVPVA-----DHLHVVAAENRYAELRYVAREIRRLVQTGH-YRYRDFLILTRHLA 354 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 Y I + + +PY + +HP++ LL + + EDV+ALL Sbjct: 355 PYQTMIAPI----LTEYEIPYFCDLPQTMAAHPLVSLLEKLLDVNLHFYRYEDVMALLKT 410 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 +L + E L N D + + + +++ G Sbjct: 411 ELLIPKGMSIAEFRADLDLCENLILKNGYEGKDWLNDFDWQFYRFGSYQEGTRTTQDEAL 470 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 E G + V + ++ L + +R L W Sbjct: 471 TERINGIRRYVQATLPPFYRALKAAKTGRQVVQVLYQFLIDHGVDRQLLHWRD------Q 524 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEG------LGAQYGDAVPLSLLRDELAQRLDQERI 650 A + ++ E + + + L+ + L+ + Sbjct: 525 ALAANQVAQAGQPEQTWSTFMQMLDEYVTLLGDVSFEEDNTEQLNEFKQLLSAGFAAAQY 584 Query: 651 SQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS-- 707 +Q V + +++ ++ ++G D V P Q+ + + D Sbjct: 585 AQIPSTLDQVVLSESGMVQTKKRQITFMIGSTDQVMPDQIENTALLTDQDRQRLLDNEGQ 644 Query: 708 -----------RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI- 755 + + + YL A +S+Q +Y +Y + + + S V+ + ++ Sbjct: 645 VTPLLNESSVGKMNAEPYLNYLAFLSSQTTVYFTYPLGNG-EGTAFKISPYVERIRNHFD 703 Query: 756 ---GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 + ++ + R +R + Q P + + R A Sbjct: 704 LTIQKIAAEQSLQSTETPQGSWRSLLSDLIQVSRQAQENQTLIPEQWLTTYRLLQQAPQS 763 Query: 813 AGKAHSEFVQPLPFTLPETVPL---------------ETLQRFWAHPVRAFFQMRLQVNF 857 F PE + L+ F+ + F + L++ Sbjct: 764 QFLTTQLFQSLNYRNEPERLTPEIVTGLYGNEIHTSISKLEEFYQNQYAYFLKYGLKLQE 823 Query: 858 RTEDSEIPD-TEPFILEGLSRY-QINQ-------QLLNALVEQDDAERLF------RRFR 902 R P T F E + R+ ++ Q +L + +++ +E L Sbjct: 824 RPVFELTPANTGNFYHEVMDRFIKLIQGQQIALPELDDQQIDKLVSEVLAKTYEQPEFKI 883 Query: 903 AAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL----------------- 945 G + +T + L ++ ++ + E+ Sbjct: 884 LNKTARMGYIRQQLMQTVKRVSLALRNQSLSTNLRPLATEVLFGQVGAEKGLQGLNFMLD 943 Query: 946 ACNGVQITGWLPQVQP---DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLF-LR 1001 V++ G + ++ + +Q + + Y + L + Sbjct: 944 DHREVKVRGKIDRIDQLTINNQPYLGIVDYKSSQHSFNFRD--AYYGLALQMLTYLETVL 1001 Query: 1002 KDGEWRFPPLAA 1013 +D + P +A Sbjct: 1002 QDQQAILPANSA 1013 >UniRef50_UPI00016C0037 ATP-dependent nuclease subunit B n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0037 Length = 1100 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 118/1090 (10%), Positives = 280/1090 (25%), Gaps = 200/1090 (18%) Query: 16 LMEFIVERERLDDPFEPEMILVQSTG---MAQWLQMTLSQKFGIAANIDFPLPASFIWDM 72 ++ + + +++V + + L L+ ++ + Sbjct: 15 QCYQKIKNTLKQNKKDKIIMIVPEQFSLEIERELTQYLAP---GLLLVEVSSFTKLVL-- 69 Query: 73 FVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF------- 125 K +++ ++ L ++ +L+ L D + F Sbjct: 70 ---------------KANITTPILDELERI------MILKKVLEDHHHELTFFTTSYNKD 108 Query: 126 QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWH 185 K L + + Q + L A + K ++ Sbjct: 109 GFLEKINILLTNCENFG---VTQLGDDTVEGTLKAKLADIQKISKWFYDFISTQFLTNEG 165 Query: 186 RANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCR 245 I++L + L + I G + + L L ++ + Sbjct: 166 ---SLNALIKSLTTTEAYKDAL---IIIDGFYSFTAAQQKVLLKLHSMARQMIVTLPMDK 219 Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGK 305 Y G + +P+ + NA + Q + + A Sbjct: 220 EYLG----SNQNHLYYKSYNTLINFEFAVPVSKQFTNAAFANKTADIQFIADNYFA---- 271 Query: 306 LGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKR 365 + + S + F ++ + + +I Sbjct: 272 -----THSIKQPRDSANVRLFACRNFESEIELVAQNI----------------------- 303 Query: 366 PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV 425 D T +I ++ +++ Y + V Sbjct: 304 -----------------------------TRFVRDDTYRYNEIAIITGNLNLYRSHLTTV 334 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 G +PY + + + Q++P + ++LL + + +L+ L +L Sbjct: 335 LGQYD----IPYFLDETKTIQANPAVNFILNLLEVITQHWNLTAILSFLKSGILTD---F 387 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 +E + YL ++ E GI + E E +T + R + ++LG + Sbjct: 388 ADEDIDYLENYLYEHGINYKNKWLEXWEEETDSTLINDLRTRVASIILGIEQKIIAH--- 444 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 ++L L + + + W + + Sbjct: 445 -----------KHRGKILTSNLCRILYDFLVEINFANTI-RWESKSESEIEHTLSKNFNL 492 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTL 664 I Q I+ + V ++ + L E++ + + + Sbjct: 493 ALEYKHIYQTILDILDRLVDILGNQYVNIATFKSILTTCFKHEKVGTIPATQDQILVGEI 552 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS-----RRDDDRYLF--- 716 R K+V L+G+N+GV+P + L+ Sbjct: 553 PRTRLPKQKIVFLIGLNEGVFPANPINDSLFSDMDLTANLFNANPNLYELFIYSNLYGSE 612 Query: 717 ---LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI-----GQSHYLPGDEALN 768 LI + L+ SY PS++ L + D+ Sbjct: 613 LEIYSTLIKPSRYLFASYSMGDD-SGKITRPSIIFTRLKRMFTMYAPSTTATTFADQIYT 671 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 ++ + + D + + G + L + Sbjct: 672 SKQAIIALGRAIKQNAGIATLDDSYKYALMWYMQHQPDAIVQTVNGLFFTNQQDKLQTDI 731 Query: 829 PETVP-------LETLQRFWAHPVRAFFQMRLQVNFRTEDSE-IPDTEPFILEGLSRY-Q 879 + + + +++F P F + L + R PD L Y + Sbjct: 732 AKKLYSNNQVTTVSRIEKFRRCPCAYFIEYGLLASERKLFKFRTPDIGTIFHSVLEIYPK 791 Query: 880 INQQLLNAL--VEQDDAERLFRRFRAAGDLPY----------GAFGEIFWETQCQEMQQL 927 + Q + + D ++L + L + + + + Sbjct: 792 LLQAAGSTWTTITPDAQQQLVATAVSESMLQNNKLKIKNGHTKYLTKRIETMSNRAITAM 851 Query: 928 ADRVIACRQPGQSME----------IDLACNG--VQITGWLPQVQ----PDGLLRWRPSL 971 A ++ + E I++ +++TG + +V PDG + Sbjct: 852 ASQLKCGKFVPAEYEYKFNDAALPAIEIDLGETTLRLTGTIDRVDAYLTPDGDTYIKIID 911 Query: 972 LSVAQGMQLWLEHLVYCASG-------------GNGESRLFLRKDGEWRFPPLAAEQALH 1018 + E + ++ K R E A Sbjct: 912 YKSGHTQFDFTEAYYALQLQLLLYLDAYLQINKDAKTAGVYYFKLDASRVAYKPGETATD 971 Query: 1019 YLSQLIEGYR 1028 +L++ ++ Sbjct: 972 MAHKLLKTFK 981 >UniRef50_C6NVE2 ATP-dependent DNA helicase Rep n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVE2_9GAMM Length = 663 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 83/617 (13%), Positives = 162/617 (26%), Gaps = 85/617 (13%) Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 LV + Q A Q I ++ P +P R + L + Q Sbjct: 121 LVRNLLREMQGPSDLAESIQARISKAKNDGHGPEDMPIRDRLDE---LAQRVYRPYQRAL 177 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA-GQLFNSD 290 K L + + R R ++ + L Sbjct: 178 KACNSVDLDDLILLPTELLSRFAEAQERWQERIRYLLVDEYQDSNGAQYRLLQNLLKKRQ 237 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV 350 VG+ + + G L PD L ++ + Sbjct: 238 NLTAVGDDDQSIYSWRGAAADNL----------QRLAQDFPDLRLIKLEQNYRSTGRILQ 287 Query: 351 AGVN---IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 A + I V E E + + +L + RD Sbjct: 288 AANHLIAHNPHLFEKKLWSSLGEGDRIQVIVARDETDEAEQVVNAILRDRFQRQG-EYRD 346 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 ++ P F +A + +PY +S + + F++ L + Sbjct: 347 YAILYRSNHQSRP-----FETALRNARIPYQLSGGISFFERSEIRDFLAYCRLLANPDDD 401 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 L ++ P R I L L + + Sbjct: 402 AAFLRAVNTP----RRGIGSATLETLGEHAKARQMSL----------------------- 434 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 ++E L + L S LN A+ + Sbjct: 435 ------------------FAALWEEDLDLAERPLLALRSFGDWLNRTAEACARSELMPTL 476 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG--AQYGDAVPLSLLRDELAQRL 645 + ++ +L + E + + ++A Q L+ L + L+ Sbjct: 477 RDLLEEIGYRRYLENEGDEREARRKWENLEELLAWMARLLEQEDGPKNLAELLNRLSVIH 536 Query: 646 DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 ER + + TL + + F V L+G+ + + P + + Sbjct: 537 ILERDEDDEERDVLRLSTLHGAKGLEFSRVFLVGVEEELLPHRNSETP------------ 584 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPG 763 ++ +++R LF + A+ KL +SY R + + PS +QEL + Sbjct: 585 -AQIEEERRLFYVGVTRARHKLSLSYCRRRKRYGEAQAPEPSRFLQELPRELLDWASGAE 643 Query: 764 DEALNCDESEARVKAHL 780 ++ + L Sbjct: 644 EQEALSATAACSRLRAL 660 >UniRef50_D1B9M8 UvrD/REP helicase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9M8_THEAS Length = 653 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 63/555 (11%), Positives = 146/555 (26%), Gaps = 88/555 (15%) Query: 216 ISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELP 275 +A +A + L + L ++ + Sbjct: 165 FRGEAQRLFEAYEAKMRSQGALDFDDLIHLPLKILSTHREALERELDSIEWVLVDEYQDV 224 Query: 276 LFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL 334 +L + VG+P A +G G D +L+ F Sbjct: 225 NRSQYMLLKRLSSRGQRTVVVGDPDQAIYGWRGADVSMILN----------FDKDFQGAK 274 Query: 335 LHNIQSDILELENRAVAGV---NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHD 391 + ++ + + N I + + + L D Sbjct: 275 VTVLEQNYRSTGHILEGANCVIARNSDRPKKNLWTAASRGEKIRILKARNDEEDSRCLVD 334 Query: 392 RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVL 451 +L + + +D+ ++ + ++ + +PY + + Sbjct: 335 WILEL--QGEGYALKDMAILYRVNA-----LSRLYEQRLIEAGIPYRVIRGLGFYDRKEI 387 Query: 452 EAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 + ++L+ L +++VP + I + L W+ + + Sbjct: 388 KDVLALMRLAIQPRDLVSFERMVNVP----QRGIGAKSTEALWAWMGQLEAQ-------- 435 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 W+SVL D A Sbjct: 436 ---------------------------DPGEFWRSVLEGDAPLKGRAREGIR-----ALA 463 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 L+ + + + + E ++ Q + +++ Sbjct: 464 RGMLGILSLRGNIRLAVRYILEEYGYGEHLEREDQSTFEERLQNVEELMSVLPEGSID-- 521 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 D L++ V++ TL + + F VV ++G+ +G++P Sbjct: 522 -------DVLSEVALFSDADVASGDDRVSLLTLHAAKGLEFPVVFMVGLEEGIFPNAKCR 574 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQ 749 DRS +++R LF + AQ++L++S R + S S + Sbjct: 575 E------------DRSLLEEERRLFYVGMTRAQERLFLSGAARRVLFGSFMMNPFSRFLS 622 Query: 750 ELIDYIGQSHYLPGD 764 E+ + Sbjct: 623 EIPSSCVVEDDRTKE 637 >UniRef50_D2SFF1 UvrD/REP helicase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SFF1_9ACTO Length = 1120 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 106/913 (11%), Positives = 210/913 (23%), Gaps = 148/913 (16%) Query: 143 PDWLAQWETGHLVEGLGEAQA-WQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESAT 201 D LA + + W A L + + Y G+ +R +E L Sbjct: 199 EDVLALAGELGEHDITADRLRAWTAQLERRIAGYPDAKGKRGPYRP-----VLEMLARQR 253 Query: 202 TCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLL 261 LP ++A +A + + P + Sbjct: 254 ARVALLP--------------LVEAFEARKRAAGAIDHSDQVALAARIAVTAPEVGRRER 299 Query: 262 TRQRRHSFEDRELPLFRDSENAGQLFN---SDGEQDVGNPLLASWGKLGRDYIYLLSDLE 318 R R ++ + LF VG+P + +G G + + Sbjct: 300 ARWRIVLLDEYQDTSVGQLRMLEALFGRTTGHAVLAVGDPRQSIYGWRGASAGTI-ERFD 358 Query: 319 SSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN--KRPLDPLDSSITF 376 + + L + ++D L + +T Sbjct: 359 RTFPGVRSREAQRLTLATSWRNDGAVLAVANAVAGLLPAPEVPLPDLAPAPSAGHGLVTA 418 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTL-------TPRDIIVMVADIDSYSPFIQAVFGSA 429 + + +E E L DRL A + + P V+V A Sbjct: 419 GLYPTVAQETEALADRLAACWRGEDPVLPPRADGRPPTTAVLVRTRKQLPGIAA-----A 473 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 R LP + P + ++ L++ + + L + AR+ I Sbjct: 474 LRARGLPVTVVGLGGLLEVPEVSDVVATLTVLVDPSAGDAMGRL----LTGARWRIGPRD 529 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L L D ++ + + + + L Sbjct: 530 LAALESRARALVHSRKPDREDDDDTAPRPSERGSIVEALD-------------------D 570 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERP-LEEWLPVCRDMLNAFFLPDAETEAA 608 + S L L +L R L + P + + + + + + Sbjct: 571 LGDPSAFSPAAYRRLRRLAAELAHLRGRLGESLPDMVDDVARVLGLETELASAPGVSPGS 630 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI----SQRFLAGPVNICTL 664 A+ AE + L L ++ER + + T Sbjct: 631 ARAHLDALHAVAAEFTELA--ELPSLPAFLGYLRDAEERERGLEPGEVAVDPESIQLLTG 688 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL---------------------------- 696 + + + VV + GM +P + + Sbjct: 689 HSAKGLEWDVVAVPGMTADQFPSRTDTSDSWVKDPGAVPVDLRTTDREELPQLRLPVPGS 748 Query: 697 ---------MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 + + R ++ L A+ A+ L S PSVL Sbjct: 749 GDQAAVRAALEDYVEEWKRFGEAEEIRLGYVAVTRAKHLLLCSGSWWRE-GVKPNGPSVL 807 Query: 748 VQELIDYIGQSHYLPGDEALNCDE--SEARVKAHLTCLHTRMPFDPQNYQPGER------ 799 + + + A +E + ++ + P P + Sbjct: 808 LDTVRRACSAGAGVVVAWAERPEEGATNPALEEWPVGMWPADPLSPPRRRALTAAAELVA 867 Query: 800 -----------------QSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWA 842 R A + + LP + + L Sbjct: 868 GAAPHPLDAAAVLGTGDPEVERWVRDADLLLRERRRIARPTVEVPLPSHLSVSELVTLRR 927 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFR 902 P RL+ + + L +LL+ + Sbjct: 928 DPAE--LARRLRRPMPAAPAPLARRGTAFHAWLEERFSVARLLDLDELPGSGDESAAPDG 985 Query: 903 AAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPD 962 A L LA + + + + + G + V D Sbjct: 986 ALTALQEAF---------------LASPWADRQPVEVEVPFETPLGPLTLRGRIDAVFDD 1030 Query: 963 GLLRWRPSLLSVA 975 G + Sbjct: 1031 GGGGFEVVDWKTG 1043 >UniRef50_Q1DC55 ATP-dependent DNA helicase PcrA n=2 Tax=Cystobacterineae RepID=Q1DC55_MYXXD Length = 783 Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 68/544 (12%), Positives = 143/544 (26%), Gaps = 57/544 (10%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS--DGEQDVGNPLLASWGKLGRDY 310 P L R ++ + QL VG+ + + G D Sbjct: 207 RPDVLENYRRRFHHVLVDEFQDTNPVQYALLKQLAPPPSANLVVVGDDDQSIYRWRGADV 266 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAG---VNIEEFSRSDNKRPL 367 +L F P + ++ + +N A + Sbjct: 267 DNIL----------GFPRQYPGAKVVKLEQNYRSDQNILDAAHEVIRKNTRRMEKKLWSE 316 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 ++ + + E + + ++LA+ + + + + V V Sbjct: 317 RQRGQTLNLMLNRDERAEGQEVARQILAL-QREGFIKLSSMAVFYRANAQ-----SRVLE 370 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A +PY + R+ + + L L + D+L ++++P I + Sbjct: 371 EALRLARVPYTLVSGRSFYDRAEVRDASAYLRLMVNPRSDADLLRIINIPA----RGIGD 426 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA------MESAQ 541 + + + N G+ ++ G +L E+A Sbjct: 427 TTVERVTDFANARGVSLYEVLSQPEQIPALNGAAVKRLKGFRNLLESLTAFAQTNEEAAG 486 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 Q + L AE + L + + V +P Sbjct: 487 AVDQMLRETKLVETLQAEGSDESQTRAENLREFLGAAQEFDLNRAAAAVAAAANPPSDVP 546 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 A +T QA + + G V + Sbjct: 547 PEVDAAPLTADVPALQAFLEQISLVG---------------------EADAEVGDGRVAL 585 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQL---APLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 TL + + F V L GM + V+P + F ++R L Sbjct: 586 MTLHAAKGLEFDAVFLTGMEENVFPHSRAVKSESTFLNEVASADGEPSEEMAEERRLCYV 645 Query: 719 ALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 A+++L++S R+ PS ++++ + EA + Sbjct: 646 GFTRARKRLFVSLAQCRSLFGELRYNAPSRFLRDVPPALFGISEQEVPEAPRPMVPSTQR 705 Query: 777 KAHL 780 + Sbjct: 706 RRTW 709 >UniRef50_C5TB61 UvrD/REP helicase n=3 Tax=cellular organisms RepID=C5TB61_ACIDE Length = 778 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 70/572 (12%), Positives = 149/572 (26%), Gaps = 53/572 (9%) Query: 187 ANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRY 246 A +Q I ++ ++ ++ V + + L + + Sbjct: 217 ARQWQWTISKWKNMGLSSEQALAQAADDNERSIAVVMARYEERLAAYQSVD-FDDLISMP 275 Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ-DVGNPLLASWGK 305 P AK ++ + E L G VG+ + +G Sbjct: 276 LRLLRDHPEVRAKWQALLGHVLVDEYQDTNATQYELLKLLVGERGHFTAVGDDDQSIYGW 335 Query: 306 LGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL-ENRAVAGVNIEEFSRSDNK 364 G L P + ++ + A I + K Sbjct: 336 RGATLDNL----------KKLPQDFPQLKVIKLEQNYRSTSAILRAANNVIGPNPKLFPK 385 Query: 365 RPLDP--LDSSITFHVCHSPQREVEVLHDRLLAMLEE-DPTLTPRDIIVMVADIDSYSPF 421 + + + E E R+ ++ +P + ++ P Sbjct: 386 TLFSELGEGEPVRVVDADTEEHEAERAVARIQSLRAASNPPPDWKSFAILYRANHQAKP- 444 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 F A +PY +S + ++ + L + L + P Sbjct: 445 ----FEKALRRANIPYKVSGGTSFFDRAEIKDLCAWFRLWINNDDDPAFLRAIGNP---- 496 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 + I L L + + + ML + A Sbjct: 497 KRGIGHTTLAALGAFATQHKQSM-------------------FGALFNGMLPAAVPKRAL 537 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 Y A L W + + E+ L + + + Sbjct: 538 DGLHEFGRYINDLEHRARHTHGAEDARAFLADWLKEIGYEQHLYDGEDSEKVAAARWSNV 597 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 + Q + + + +S L+ ++E+ V + Sbjct: 598 MEFCDWMAQRAGGQIDDTAGAVVARETKSLLEVSQTIALLSTISEREK-----EQDMVTL 652 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 TL + + + V L+G+ +G+ P +L QK R ++R L + Sbjct: 653 STLHASKGLEWPHVVLVGVTEGMLPFKLDDDEG--RQQKVTDDTLQRLQEERRLMYVGIT 710 Query: 722 SAQQKLYISYIGRSIQDNS--ERFPSVLVQEL 751 AQ+ L +S+ + + PS + E+ Sbjct: 711 RAQRTLAVSWTKKRKKGREMVAAQPSRFIAEM 742 >UniRef50_Q0F272 ATP-dependent DNA helicase Rep n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F272_9PROT Length = 652 Score = 199 bits (504), Expect = 7e-49, Method: Composition-based stats. Identities = 61/560 (10%), Positives = 145/560 (25%), Gaps = 85/560 (15%) Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG 284 + AL + + + A R R ++ + + Sbjct: 164 ETYDALLEKMNAVDFDDLLVLPLRLLSEHDNVRAIWRERARYFLVDEYQDSSRIQYQLVR 223 Query: 285 QLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL 343 L D VG+ + +G G + L + + ++ + Sbjct: 224 LLVPDDGNLTVVGDDDQSIYGWRGAEVKNLFQ----------LERDYTNLHVVRLEENYR 273 Query: 344 ELENRAVAGVNIEEFSRS---DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED 400 + A ++ + R I +P+ E L + + Sbjct: 274 STGSILQASNSLIANNSERLGKTLRSTLGQGKPIRVWGSPNPEEEARRLAGDIKSHHARS 333 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 V+ + F A + +PY +S + ++ ++ L L Sbjct: 334 GG-QWDAYCVLYR-----ASFQSRSIELALREAGIPYHVSGGMSFFDRAEIQDILAYLRL 387 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 + + + P R I + L L + A Sbjct: 388 IANFSDDLAFMRAIARP----RRGIGSKALGDLGFFAMAEDCSLLEACLKEELDHKRAEA 443 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 + + + + + +VL Sbjct: 444 LREFGDMIVGLEHQFRHGEPDDAFDAVLDLTRLE-------------------------- 477 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 A +A+ + + + L+ Sbjct: 478 ----------------AAIRAEADDQEVAERRMSNVLELRRWWVIHTERGG-DLTEFLQH 520 Query: 641 LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 + +++ +G V + T+ + + F V ++GM +G++P + Sbjct: 521 IFLLAEKQDDD---PSGQVRLMTVHAAKGLEFDQVYVIGMEEGIFPHRN----------- 566 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQS 758 D +R +++R L A+ A+ L +SY + + PS ++E + + Sbjct: 567 --ALDENRMEEERRLMYVAMTRARFLLTLSYSLTRRRFGTIEKCAPSPFLKEPDQSVLRW 624 Query: 759 HYLPGDEALNCDESEARVKA 778 D +E++ + A Sbjct: 625 VDKDADSEEAHEEAQDHMAA 644 >UniRef50_B3QF13 UvrD/REP helicase n=9 Tax=Rhizobiales RepID=B3QF13_RHOPT Length = 848 Score = 199 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 80/686 (11%), Positives = 179/686 (26%), Gaps = 106/686 (15%) Query: 102 LLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYR--PDWLAQWETGHLVEGLG 159 L + LL+ L D+ K + + A L D + P + E G G Sbjct: 143 LDTDDQIRLLKQLLAADNIDDKRWP-ARMLAGLIDGWKNRGLTPSQVPAGEAAMFGNGRG 201 Query: 160 EAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSR---VFICGI 216 Q +L I +R + + Sbjct: 202 GKLYAQ--------YQERLKILNAADFGDLLLENIRLFREHPDVLRSYQNRFKFILVDEY 253 Query: 217 SALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL 276 L+ L + G + + + S + Sbjct: 254 QDTNVAQYMWLRLLSQTPS--------SSSLPGSTRQSISSQEDGSPGLAASRRPGDDVE 305 Query: 277 FRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 + A VG+ + +G G + +L F P + Sbjct: 306 TSGNVVASTSAPPKNICCVGDDDQSIYGWRGAEVDNILR----------FDHDFPGAKVI 355 Query: 337 NIQSDILELENRAVAG---VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRL 393 ++ + + A + E R D +T + E + + + Sbjct: 356 RLERNYRSTGHILAAASHLIAHNEGRLGKTLRTEDVDGEMVTVTGAWDSEEEARAIGEEI 415 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 + + L +I ++V + F F LPY + + Sbjct: 416 EQLQRQGHAL--NEIAILVR-----ASFQMREFEDRFVTLGLPYRVIGGPRFYERAEIRD 468 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 ++ L + +S +++VP Sbjct: 469 ALAYLRVINSPADDLAFERIVNVP------------------------------------ 492 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 + +ML +A + +++ ++ L + L L+ Sbjct: 493 -------KRGLGDATVQMLHDHARKRRIPLFEAARMVIDTDELKPKARSSLRGLIENFER 545 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 W+ E + D + + A + + ++ + Sbjct: 546 WQVQ-RDALAHTELAEIVLDESGYTEMWQKDRSADAAGRLENLKELVRSMEEFE-----N 599 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 L + ++ +D+E V++ TL + + F+ V L G +G++P Q A Sbjct: 600 LQGFLEHISLVMDRE---GGADEDAVSVMTLHSAKGLEFETVFLPGWEEGLFPHQRA--- 653 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQEL 751 + ++ + G +++R L + A+++ + + + PS + EL Sbjct: 654 ---LDEQGRAG----LEEERRLAHVGITRARKRAKLYFATNRRIHGTWNTTIPSRFLDEL 706 Query: 752 IDYIGQSHYLPGDEALNCDESEARVK 777 + G + Sbjct: 707 PAANVEITESKGGSGWGGMSGYGPSR 732 >UniRef50_C1E652 ATP-dependent DNA helicase n=2 Tax=Micromonas RepID=C1E652_9CHLO Length = 907 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 66/539 (12%), Positives = 142/539 (26%), Gaps = 72/539 (13%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYI 311 R R ++ + E L VG+ A + G + Sbjct: 272 SEEARLFYRQRWRHVLVDEFQDTSLSQYELIRALAAETARVFVVGDVDQAIYSWRGAEVA 331 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 + + +S LL + A A + + P Sbjct: 332 NIRTKFDSDFAGAG------TVLLTKNYRSTATIVKAAQAVIGESRDRSPLELDAVRPGG 385 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 + E A + +DI V+ P A Sbjct: 386 KDVAVVATEDEIE--EADFAAREAARAARSGVPLKDIAVLYRTHSQSRP-----LEEAFI 438 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +P+ + A + ++ ++ L + + + + +++ P I L Sbjct: 439 RAGVPHVVVGDTAFYTRKEIKDLVAYLRVLFNSRDTVSLQRIINTPP----RKIGPGTLE 494 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 L W LP G+ + ++ +LP Sbjct: 495 KLEAWA----------------AGLPWVDGMPQPLGMALLDRTWSTPDQ----DDLLPPA 534 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 GL A ++ + + + P V R + ++ D E Sbjct: 535 ADMGLAAGAYKAVSGFVSVMRELGEAVEVSDPGALTEEVVRRIGFEEYVADMENGDERVG 594 Query: 612 IEQQWQAIIAEGLGAQY----------------------GDAVPLSLLRDELAQRLDQER 649 ++ +I ++ + L + ++ + E Sbjct: 595 YVKELVSIASDPSAVESLDGVDGGGAAGGGDNGATKRKSTGHAGLGEFLEGISLLMSAET 654 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 S+ A V + TL + + F V + G D + P + D + Sbjct: 655 RSEDEGADAVKLMTLHAAKGLEFDTVLITGCEDELIPFKRGDAS----------SDAAEH 704 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEA 766 D++ LF L A++KL++ + + + PS ++ + + + A Sbjct: 705 DEEVRLFYVGLTRAKRKLFLCRAFKRQRFGRTVYADPSPFLEVIRESLVGGKPPQARRA 763 >UniRef50_C0EHH2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHH2_9CLOT Length = 1119 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 118/1149 (10%), Positives = 267/1149 (23%), Gaps = 209/1149 (18%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG--IAA 58 MLR + +++ + M++V Q + S+ G + Sbjct: 1 MLRFVFGPHGSGKSTELMRRIQQTAGE---RRIMLVVPEQFSFQT-ERECSRLLGAELGN 56 Query: 59 NIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 ++ +F + ++ +M L ++ L Sbjct: 57 RVEVVSFTRLARLIFRTYGGLTGNYAD----KIAKNIMMNL-------ALGEVQDGLEHY 105 Query: 119 SDKRKLFQLSSKAADLFDQYLVY--RPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYT 176 + + D+ P L + + ++ Sbjct: 106 GKSVEKSGFAELMLKTADELKNSAISPASFENAVALFPEGNLRDKSREISLIYTTYDGLL 165 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 ++ + +E ++ + V ++ + Sbjct: 166 NKTYRDP------LDDLSRAVEKVRGTGFFEGYDIYFDEFLSFTAVQRGMIEEMM----- 214 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG 296 F + Sbjct: 215 ----------------------------------QAADLTFALCWDREDGGLLFEPCRKT 240 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDV-TPDNLLHNIQSDILELENRAVAGVNI 355 L + + L + + + L +++ +IL Sbjct: 241 TRSLLNMARR-------LGVGAE-RPVHLTENRLFVHPELAHLERNILRNR--------- 283 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 P + + + EV+ + + +++ R+I ++ D+ Sbjct: 284 --------IEPYQGTCEHVKVLLAPNEYGEVDAVLSEVWELVQRH-GYRFREIALITRDL 334 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 +SY V SA +PY + + + + P++ SLL+ D VLALL Sbjct: 335 ESYQG----VLESALRKYGIPYFMDETVSVEHDPLIRFASSLLAAADGGKDISPVLALLK 390 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 + + Y ++ I +L P T G Sbjct: 391 CGLTR----FGLTQISYFENYLYTWNIT-------KDQLNQPFTHNPRGFVDRETEQDGQ 439 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 A +V E L+ L L L + + Sbjct: 440 VTALADEVRAAV---AEVISLLRGAEQTARGYGSALFEALHRLGVADVLNQRVERLN--- 493 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 + I+ + + L R+ + Sbjct: 494 ---GEEKFPEAEEQARLWDVLIDILEVLAHSTGEVRLTLRRYRELFDLSAKGYDLGSIPQ 550 Query: 656 A-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR-------- 706 + V I + + V + G +G++P G S + + Sbjct: 551 SLDAVMIGSAERTIIGNSRAVFVFGAGEGIFPLSPQFDGVFTDSDREELKKLGVELSKPI 610 Query: 707 -SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE 765 R ++R+ ++L S ++ L +S + S +PS ++ ++ G + Sbjct: 611 GDRILEERFSAYKSLSSPREHLVVS-ARLADIAGSPLYPSEVITQITKMFGSGVVTYTAD 669 Query: 766 A------LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 + + ++ H + + + E L AA+Q G Sbjct: 670 LGLADFCRTKESAFLQLAFHYRSRDGQAEALRRYFAQDEEYGDRLRRLDAAAQTGGFRLY 729 Query: 820 FVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR 877 + + ++ ++ F ++ R L LS Sbjct: 730 DRKNAERLFGRQLAVSPTQVENYYKCGFLFFCANGMKAYPR---------GKANLNPLSL 780 Query: 878 YQINQQLLNALVE------------QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 ++ +L L+ E+L + F + + Sbjct: 781 GKVTHHVLEQLLSTPSFYQMEYEEIAQAVEQLLDGYIDQFMGGKQDKTARFLQLYRNTAR 840 Query: 926 QLADRVIACRQP-----GQSMEIDLACNG----------------VQITGWLPQVQ---P 961 L + ++ Q +L V++ G + +V Sbjct: 841 SLVELARNIQKEFAHCRFQPAAFELEIGDKGAVQPITLPLSDGCSVKLIGEIDRVDSYQK 900 Query: 962 DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLS 1021 DG R A S ++ + L L Sbjct: 901 DGKTYIRVVDYKSG-------------AGRTFDLSEIYYGLN-------------LQMLL 934 Query: 1022 QLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMV 1081 L + +G + E+ A + A + +G M Sbjct: 935 YLFSLWEQGKAK----FGETVPAGVLYLPAGGAFGSFGITKREGDAEDAAKEIQKGFRMN 990 Query: 1082 RGEGDDIWY 1090 D Sbjct: 991 GLLLQDEEI 999 >UniRef50_Q72IS0 DNA helicase uvrD n=3 Tax=Thermus thermophilus RepID=Q72IS0_THET2 Length = 692 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 58/514 (11%), Positives = 136/514 (26%), Gaps = 94/514 (18%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYI 311 D L + R R ++ + L VG+P + D Sbjct: 203 DEEVLRLVRKRARFIHVDEYQDTSPVQYRFTRLLAGEEANLMAVGDPDQGIYSFRAADIK 262 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLD 368 +L F P+ ++ ++ + E A A + RP+ Sbjct: 263 NILD----------FTRDYPEARVYRLEENYRSTEAILRFANAVIVKNALRLEKALRPVK 312 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + + + E + + + + V+ + Sbjct: 313 RGGEPVRLYRAEDAREEARFVAEEIARL-----GPPWDRYAVLYRTNAQ-----SRLLEQ 362 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A A R +P + ++ ++ L + + + +L+ P Sbjct: 363 ALAGRGIPARVVGGVGFFERAEVKDLLAYARLALNPLDAVSLKRVLNTPPRGIGPATWAR 422 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + A E W+++ Sbjct: 423 -------------------------------------------VQLLAQEKGLPPWEALK 439 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + L + + + + P E + + + Sbjct: 440 EAARTFPRPE----PLRHFVALVEELQDLVF--GPAEAFFRHLLEATDYPAYLREAYPED 493 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + + ++ A+ L D + L + G V + TL + Sbjct: 494 AEDRLENVEELLRAAKEAE-----DLQDFLDRV--ALTAKAEEPAEAEGRVALMTLHNAK 546 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F VV L+G+ +G+ P + + +++R LF + AQ++LY Sbjct: 547 GLEFPVVFLVGVEEGLLPHRNSVSTL------------EGLEEERRLFYVGITRAQERLY 594 Query: 729 ISYIGRSIQDN--SERFPSVLVQELIDYIGQSHY 760 +S+ PS ++E+ + + + + Sbjct: 595 LSHAEEREVYGRREPARPSRFLEEVEEGLYEVYD 628 >UniRef50_B2A098 UvrD/REP helicase n=3 Tax=Verrucomicrobia RepID=B2A098_OPITP Length = 668 Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 60/528 (11%), Positives = 141/528 (26%), Gaps = 88/528 (16%) Query: 246 YYWGD--IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASW 303 +W + IK P R R ++ + ++ +L VG+ + Sbjct: 213 EFWLELLIKAPEVAQYFAHRFRHVLVDEYQDTNTLQAQIVDRLAAHHCVMAVGDDAQCIY 272 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV-----NIEEF 358 G ++ + F D P +H I+++ + Sbjct: 273 SWRGANFEN----------IMTFPDRHPGTAIHRIETNYRSTPEILNFANGVLLAQPKGR 322 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 R + + E + R+ A++ ED ++ ++ ++ Sbjct: 323 HFDKELRAARGHAQKPFVVQAMDDREQAEFILKRIRALV-EDEGVSLNEVAILYRSH--- 378 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 F+ A + +PY I+ + ++LL + ++ + Sbjct: 379 --FLALEVQLALSRAGVPYQITSGVKFFERQHIRDLVALLRFVYNGADTQAWQRIA---- 432 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 L + + +A Sbjct: 433 ------------------------------------VLLPKIGEKGAQKIYAAAVDHARL 456 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 + + + D S + + AS L+ + RP + + Sbjct: 457 TQKNLLDVLNTDDVRSKVAKDARDDWASFCASLSEVAEKMQHARPADAVATAIEGWYGDY 516 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ-RFLAG 657 + ++ + A Sbjct: 517 LKGQYADYLDRLDELKALVGFAQRFEET--------QDFLAQIVLLNSETSDRHVDPEAE 568 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V + T+ + + + VV ++G+ DG +P + + D+ +++R LF Sbjct: 569 AVRLTTVHQAKGLEYDVVFVIGLADGQFPGRRSIESGDV-------------EEERRLFY 615 Query: 718 EALISAQQKLYISYIG---RSIQDNSERFPSVLVQELIDYIGQSHYLP 762 A+ A+ +LY+SY R PS + E+ + + + Sbjct: 616 VAVTRARNELYLSYPKVATRGGPGGMLLTPSRFLLEVPTDLYEPLRIK 663 >UniRef50_C2ME74 ATP-dependent DNA helicase PcrA n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2ME74_9PORP Length = 778 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 62/566 (10%), Positives = 141/566 (24%), Gaps = 92/566 (16%) Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQE 322 ++ + E A L VG+ + + G +LS Sbjct: 218 IDFLLIDEYQDTNTSQFELARHLVADHNRIFAVGDDAQSIYSFRGARIANILS------- 270 Query: 323 LDAFVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVC 379 F L ++ + + A A + + + + Sbjct: 271 ---FKQAFAGAKLFKLEQNYRSTGHIVSSANALIEHNQQRIPKEVYTDLGEGEKLQLYHY 327 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 S E L D + ++ + D ++ F +PY I Sbjct: 328 TSSDEEATRLIDIITQR-HDEEQIPLSDQTILYRTNAQ-----SRKFEEVLLSEGIPYVI 381 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 A + ++ I+ L L + + + P R I ++ + + + + Sbjct: 382 YGGMAFYARAEIKDAIAYLQLIINPHNELALRRAIAYP----RKGIGDKTIEKVALYAQQ 437 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 + + + + + GL Sbjct: 438 HSPQLSLY----------------------------------DALCAAIDSADPVGLSRG 463 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 + +AS + ++ LEEW+ E + Sbjct: 464 VRNKIASFVNLIDSLASAYQHYAKLEEWIAHILRESGIVAELTREDTVESQAKLDNLKEF 523 Query: 620 IAEGLGAQYG--------------DAVPLSLLRDELAQRLDQERISQRFLA-----GPVN 660 I+ + LS ++ +Q++ + + + Sbjct: 524 ISSASEFEARYRQDPLNLFAEEPLGTELLSAFAQQIPLLTNQDQDNVEQQSGVALQDRLQ 583 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + T+ + + F V + G+ + + P + +++R L + Sbjct: 584 LMTIHVAKGLEFPYVYIAGVEENLLPSSRS------------LDTAEMIEEERRLLYVGI 631 Query: 721 ISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 AQ+ +SY ++ PS + EL + + S A Sbjct: 632 TRAQKLCTLSYTSIRTRNGKTELMIPSRFIAELPRAHY-TLHEEAAPIGTSVRSYANSYQ 690 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAR 804 T P +Q A+ Sbjct: 691 PTTNSQRPTATSPSASSATAQQMLAK 716 >UniRef50_B2WB64 ATP-dependent DNA helicase pcrA n=2 Tax=Pleosporineae RepID=B2WB64_PYRTR Length = 851 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 69/643 (10%), Positives = 169/643 (26%), Gaps = 63/643 (9%) Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQE 322 + ++ + E L VG+P + + + LL Sbjct: 207 IQAVLIDEYQDTNNIQYELMSLLAQKTKRITIVGDPDQSIYSFRSAEIKNLLRM------ 260 Query: 323 LDAFVDVTPDNLLHNIQSDILE---LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVC 379 P++++ N++++ + + A+A + +E + T Sbjct: 261 ----RTDYPESVVINLENNYRSSGCILSSAMAVIEQDESRPQKALVATHGIGEQPTLRHL 316 Query: 380 HSPQREVEVLHDRLLAMLEEDPTL-TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 S E + + + L + D ++V + A +PY Sbjct: 317 ISANVEARWIVEEIHRTKTLTAGLLSFNDYAILVRS-----SPLTLQIERALGQAGIPYR 371 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 + ++ + L + ++ V +++VP + + ++ L + Sbjct: 372 MVAGTKFFDRAEIKIILDYLRVISQPDHNDAVARVINVP----SRKVGDVTVKAL---LE 424 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 E+ +R V ++ + + + + +LP + Sbjct: 425 EAEVRKVTLWKLVLDVAQGRRKPQCKVSAQANIGISQFVNVILTSREKLLPAKSDECDLF 484 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 L+ H+ + + + ++ + ++ +++N + + Sbjct: 485 GLIMHVLNKIAFQSYLKQA--HKENWQDRWANVEELINQATQMATAVANGEEISDDALPE 542 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + A LS + L V I T+ + + + VV + Sbjct: 543 -VEGLEQRSDTAADLLSKFLANVT--LSSAADQDGSELDQVTISTIHAAKGLEWPVVFMP 599 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 + DG P A D++R L + AQ LY+S + Sbjct: 600 AVYDGSIPHSRAEDQ----------------DEERRLLYVGMTRAQGLLYLSCPVKQSGQ 643 Query: 739 NSERFPSVLVQE--LIDYIGQSHYLPGDEALNCDESEARVKA--------HLTCLHTRMP 788 S + + + + + + ++ P Sbjct: 644 EQTTL-SRFISDRKIQKLFNERGPDLAFKRSTIPDLARILRRNCPTTADIDAARNLLDRP 702 Query: 789 FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAF 848 D + E A H + + T H V Sbjct: 703 EDDKYPATREELDGDDSTYGAPWDNNNNHKNPGTTYGASKKRKLNNPTSSTTAVHSVPTT 762 Query: 849 FQMRLQVNFRTEDSEIPDTEPFILEGLSRYQI--NQQLLNALV 889 F T + + +P L + Q+ + Sbjct: 763 MTRTAG--FSTASTTMQAIKPGFTSALDLGNLQAMQREAERIR 803 >UniRef50_B3E665 UvrD/REP helicase n=1 Tax=Geobacter lovleyi SZ RepID=B3E665_GEOLS Length = 1048 Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 127/1014 (12%), Positives = 247/1014 (24%), Gaps = 159/1014 (15%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAA-NIDFPLPA 66 + ++L A + I+ E + L + ++ L Q G A +D Sbjct: 39 GKTEILAARIANILLSTDATP--ESILCLTYTDAGTVAMRNRLLQFIGPNAYRVDIFTFH 96 Query: 67 SFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQ 126 +F + F + L + E E F +R + + L + Sbjct: 97 AFCNLVIQEN------ADYFG--------LRSLTTISELEQFRFVREIIDAFPHEHPLTR 142 Query: 127 LSSKA----ADLFDQYLVYR-PDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 + L Y + + DW A W + L+K + Sbjct: 143 STGDIHFESDRLLALYEIMKKEDWSADWLAARVDAYAATLPDNPDFLYKRQTRASDGTVY 202 Query: 182 PRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 + L L + Y Q L+ G++ ++ Sbjct: 203 KKGDLNER------KLREELRKLEQLKAAARSF------DDYQQLLKERGRYDFADMILW 250 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG---EQDVGNP 298 C + ++ LA R ++ + E QL + VG+ Sbjct: 251 --CSAAFK--QNADLLATYQERYLYLLVDEFQDTSGSQFELLMQLADYWDAPNLFVVGDD 306 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLL---HNIQSDILELENRAVAGVNI 355 + + G + + ++ + L H IL+ + Sbjct: 307 DQSIFRFQGASVENI------RRFVERYRPSLTTVTLTDNHRSSQLILDGAGALIGRNQE 360 Query: 356 EEFSRSDNK---RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 + L + E + +R+ A+L D + P I V+ Sbjct: 361 RLSDEKQLIAMNPEVAALPEPPQLEGYATLAHETVAIANRIGALL--DAGVLPEQIAVIY 418 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF-VSEDVL 471 + I R + R P++ +++L + Sbjct: 419 RNHSQSEEII-----RYLTARGVAVQTRRRADILQEPLILKLMNVLRYLATELERPHSGE 473 Query: 472 ALLDVPVLAARFDITEEGLRYL-RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 LL + F + L L + + + L GQ Sbjct: 474 RLLFEILHEPWFGVPPLALARLSVEIARQRTEKRPSYWREQLPLRGMDKGQQALFPASDD 533 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 + L A E+ + + L ++ +L I + L+ Sbjct: 534 LHLRQAGETIEELLRDAATMTLQEL--------LHHVITRLGILAQALS----------- 574 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL----AQRLD 646 + + + L L L Q + Sbjct: 575 ---------------AHERVWHLELLNTLFDFVREETAKQPLSLPELLAMLADMQRQGIS 619 Query: 647 QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR 706 + VN T + + F V +LG GV+ + + Sbjct: 620 LAVEKLSYTGAGVNFLTAHGSKGLQFDHVFMLGCTRGVWDSASRNRTYSMPPTIWSGPAG 679 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA 766 S ++ R LF A+ A+++L IS+ R ++ E S V EL + G S Sbjct: 680 SEEEESRRLFYVAMTRARKQLVISWPERDNKE-KELEKSRFVAELAESGGGSIRQHVLSD 738 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 V L D Sbjct: 739 DELLAFGNAVLQALPARLPAELIDDAFVDS-----------------------------L 769 Query: 827 TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN 886 ++ + L + P+ +F L+V + L+ L Sbjct: 770 LQKYSLSVTHLNSYLRCPLSFYFNTLLRVPAP------------MSSALTFGSAVHHALE 817 Query: 887 ALVEQDDAERLFR-------------RFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA 933 L + A+ R R + A E + A Sbjct: 818 QLFRKMKADPAGRFPTADVFVEDFRWFMRRHEEGFTPAEFRRRLEYGETILPGFYAAHHA 877 Query: 934 CRQPGQSMEIDLA---CNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 + +E +G+ + G L ++ G + Sbjct: 878 GWKRDALVEYPFRNILMDGIPLNGKLDMLEFSGN-HVTVVDYKTGNPQNARKKL 930 >UniRef50_A1SGT8 UvrD/REP helicase n=1 Tax=Nocardioides sp. JS614 RepID=A1SGT8_NOCSJ Length = 1073 Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 117/870 (13%), Positives = 225/870 (25%), Gaps = 110/870 (12%) Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 ++A + L + + + + P +R + ++ + + Sbjct: 240 VEAYRRLKRDLGLMDFSDQIELGARLASEQPDVGELERSRFKVVLLDEYQDTSVAQAVML 299 Query: 284 GQLF-NSDGEQDVGNPLLASWGKLGRDYIYLLSDLES-SQELDAFVDVTPDNLLHNIQSD 341 +LF VG+P A +G G +L+ ++ V P + + Sbjct: 300 SRLFSGGHPVTAVGDPNQAIYGWRGASVSNILNFADTFPAAGSRAVPTYPLTVNRRSDAR 359 Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 ILE+ NR A + + + ++T V + E+ L + E P Sbjct: 360 ILEVANRLAAPLYEKYGQVEPLVAKPEAETGTVTTQVFETHADELAWLVGAVKEAHEGLP 419 Query: 402 -TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 I V+ D A +P I P + ++ L+L Sbjct: 420 ADGGWAQIGVLTRDNAHAEDVF-----DALTSAGVPVEIVGLSGLLRLPEVAEIVATLTL 474 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 + +L + R+ I LR L + E R G D + Sbjct: 475 LHDVTANAALL----TLLTGPRWAIGPRDLRLLGRRALEIAGRHGRGADAASITDQLLE- 529 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 + + L E + L +L + R + Sbjct: 530 -----------IADGIDPAELPSLDDALADPGEHAYSPEALERFGLLSAELRMLRTYVG- 577 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY-GDAVPLSLLRD 639 PL + + D + A + Q V L L Sbjct: 578 -EPLLDIVRRIIDTSGTDVELGSAVSPAAAARRDNLDLFVKAVAEFQAVDGDVTLPALLA 636 Query: 640 ELAQRLDQ---ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 L DQ ++ A V + T+ + + + V L+G+ + +P + + Sbjct: 637 YLTAEDDQGNGLDVATPTEADSVKLLTVHRAKGLEWDSVFLVGVCETRFPSNRSRTLWTS 696 Query: 697 --------------------------MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 + +++ L A A ++L ++ Sbjct: 697 SPAILPAPLRGDAGDLPQLAGHDKAALDAYRAATRDHDAEEELRLGYVAFTRAARRLSVT 756 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG----------------------DEALN 768 S + + PS Q + D + P Sbjct: 757 SYLWSPRA-TPFGPSAYQQVVRDQLHDWAEPPTWLARPEKGDPNPYDAVDPSRPWPATGT 815 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 E+ R++A E A +A + L L Sbjct: 816 GREAALRIEAARRVREVDAAAVDAGLDMIETARVAEWDAELERLLAEARRDRSTDLAVPL 875 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 P ++ L R P F + + R + A Sbjct: 876 PPSLSATALARLREDP-ETFARELARPMPRPPS-----------SAARFGTRFHAWVEAR 923 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ--LADRVIACRQPGQSMEIDLA 946 Q + LF G G + + + A R + ++ + Sbjct: 924 FGQ---QDLFDYGDLPGRADAGIDDDSDLKELIATFEAGPFATRTPHQVEAPFALVLRHP 980 Query: 947 CN-GVQITGWLPQVQPDGL--------LRWRPSLLSVAQGMQLWLEHLVYCASGGNGESR 997 G + G + V + + W+ + + A +QL L L + R Sbjct: 981 GGPGQVVRGRIDAVYAESTPEGDGFLVVDWKTNRAATADPLQLALYRLAWAELHDLPLER 1040 Query: 998 L-----FLRKDGEWRFPPLAAEQALHYLSQ 1022 + ++R P L AL L Sbjct: 1041 VRAAFYYVRTGEVVEPPDLPDRAALEALLD 1070 >UniRef50_B4UKQ6 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID=B4UKQ6_ANASK Length = 797 Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 90/651 (13%), Positives = 167/651 (25%), Gaps = 73/651 (11%) Query: 147 AQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPG 206 G Q L K L+ + + I+ ++ Sbjct: 107 EAARAGLSPSFAIYDDDDQLRLVKGLLSELGLDEGEGLTPRQVLSQ-IDRWKNQALRAAE 165 Query: 207 LPSRVFICGISALPPVYLQALQALGKHIEIHL--LFTNPCRYYWGDIKDPAYLAKLLTRQ 264 + + VY + QAL + + L P R D A A+ R Sbjct: 166 VKVAGLDPETARAKEVYHRYEQALARAGAVDFGDLLLRPVRLLEED---AALRARWAGRF 222 Query: 265 RRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQEL 323 R ++ + L VG+ A + G D +L Sbjct: 223 RYLLVDEFQDTNPVQYRLLQLLTGPRRNVCVVGDDDQAIYRWRGADVSNIL--------- 273 Query: 324 DAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCH 380 F P + ++ + + A A ++ R + + V Sbjct: 274 -GFDGDFPGTKVVKLEQNYRSTRTILDAAHAVISRARRRREKRLWTESGAGAPLALLVGE 332 Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 E E + + A E + +I V+ P +A +PY I Sbjct: 333 DEHAEAERIARAVAA--ERGRGTSGDEIAVLYRTNAQSRP-----LEAAMRAARIPYVIV 385 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 + + + L L S D+ +++ P I + + LR Sbjct: 386 RGTSFYERAEVRDAAAYLRLALSPASDLDLERVVNRPP----RGIGGKTVERLRAHAAAR 441 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 G+ + ++ G A + + + E Sbjct: 442 GLPLVEAVAERDAVAELKPAARRALAEFHALVTGLAADVPA--LDAGVAVQEVLKRSG-- 497 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 L + + AE A + +++ I Sbjct: 498 --------------------------MLSRLEEEHTDEAVERAENLAELVAAAREFDESI 531 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 A + V L L Q G V + TL + + F+ V L GM Sbjct: 532 AGEPPPGDPEEVRPPPLARFLEQIALLGEADAATPEGRVALMTLHAAKGLEFEAVFLAGM 591 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 DG P + + + D++R L + A+++L IS R I Sbjct: 592 EDGTLPYER------PWADQTSSERDESLDEERRLCYVGMTRAKRRLTISLARRRIGYGE 645 Query: 741 ------ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 PS +++L + A ++ + Sbjct: 646 NGPSYRNMEPSRFLRDLPPELFGDAVAREVRAREAAQAAPVARPPTIRRLP 696 >UniRef50_UPI000023F08A hypothetical protein FG08405.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023F08A Length = 1060 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 63/539 (11%), Positives = 143/539 (26%), Gaps = 81/539 (15%) Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQ----------------RRHSFEDRELPLFRDSEN- 282 Y + L + ++ + E Sbjct: 173 LRTCYEEYQAQLTRSNLLDYDDLLVKCVELLRDHPACVSNVQTVLIDEYQDTNGIQYELM 232 Query: 283 AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDI 342 VG+P + +G + L L P+ +++ + Sbjct: 233 KLFAQAKQRITIVGDPDQSIYGWRSAEVKNLFRLLRE----------YPNTDEISLEENY 282 Query: 343 LELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 ++ + + + P+ + S E E + + + Sbjct: 283 RSSQSILDVSLTVIQQDTKRYKKVLLPVHTKGARPVLRSLKSSSAEGEWIVSEIKRAVMM 342 Query: 400 -DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 L D+ +++ + SA + Y + ++ I L Sbjct: 343 FGDMLKFEDVAILLRSAA-----LSRHIESALGKAGVAYRMIGGHKFYERKEIKVLIDYL 397 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR-WGIDDDN------V 511 + ++ + +++VP R I E ++ L + +S + W + + Sbjct: 398 RVVSQPDNNDALARIINVP----RRGIGEATVKALIEEAEQSDMSLWTLILKHCRGNRKA 453 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 + P Q + + S + V + L+ L Sbjct: 454 KANIRPKMEQKLNTELIRTITSLQKQASEISQSSPVTLVNLIEQLLTHLDFKKYLEEEYT 513 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 + ++E++ + D + F PD + + ++Q Sbjct: 514 EEHEQRW---ANVQEFVNLVSDFMKDFGAPDEDALPEIDNLDQV-------------KVD 557 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGP-VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 L +A D + V I T+ + + + VV + + G P + Sbjct: 558 DMLGRFLANVALASDAQNKGDTTEQKSLVTISTIHAAKGLEWPVVFVPSVYTGSIPHSRS 617 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD-NSERFPSVLV 748 D++R L A+ A+ LY+S Q +S+ S V Sbjct: 618 EDT----------------DEERRLLYVAMTRAKALLYLSCPLYGSQGLSSKVELSPFV 660 >UniRef50_C7MVN2 DNA/RNA helicase, superfamily I n=5 Tax=Actinomycetales RepID=C7MVN2_SACVD Length = 1066 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 105/813 (12%), Positives = 198/813 (24%), Gaps = 101/813 (12%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD-VGNPLLASWGKLGRDYI 311 DP LA R R +D + L + + G+P + + G D Sbjct: 243 DPELLAGEQARVRHLFVDDAQHLDPLQYRLVRLLAETASDAVLAGDPDQSVFSFRGADP- 301 Query: 312 YLLSDLESS--QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 L +D + + + D ++H I A + Sbjct: 302 RLFADADPDGDRTVVLTRSHRLDPVVHEAVGRIAATLPGTSA-----HRASVPTPTRGRE 356 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + + +P E + D+L D + + V++ + P +Q A Sbjct: 357 GRGKVRTRLSPTPAAEAAWIADQLRRAHLLD-GVPWSQMAVLMRSVSRSLPVLQR----A 411 Query: 430 PADRYLPYA-ISDRRARQSHPVLEAFISLLSLPDSRF--VSEDVLALLDVPVLAARFDIT 486 +P A +++ P + +++L +E LL P+ A Sbjct: 412 LTMAGIPVAAVTEELPLARQPAVRPLLTVLWAAADPRVLDAETAEMLLSSPLGGADPLAL 471 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 R LR+ +G D+ V L +L ++ + Sbjct: 472 RRLRRGLRRLELVAGGERSSDELLVEAL-------------RDGDVLAGLADAEAAPVRR 518 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 V + + +L Q+ + Sbjct: 519 VSRLLTVAREAMRSGAGVEDVLWQVWQ----------ASGLQDRLVAQAAKGGTLGMRAD 568 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + + + A + V++ T Sbjct: 569 RDLDAVVALFDAARRYVDRLPKAGVLGFVEYLSS-QHIAGDSLAPVAVRGSGVSLLTAHG 627 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPL-------------GFDLMSQKPKRGDRSRRDDDR 713 + VV +LG+ +G++P G D + ++R Sbjct: 628 AVGREWSVVAILGLQEGMWPDLRLRGSVLGVERLVDLLSGVDDDAVATVSATAPLLAEER 687 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 LF A A+ L +S + + PS +L+D + G + Sbjct: 688 RLFYVAASRARHTLLVSAVQ-----GEDEQPSRFFFDLVDAGVDTERGGGPDVRLVARER 742 Query: 774 ARVKAHLTCLHTRMPFD------PQNYQPGERQSYAREWLPAASQAGKA----HSEFVQP 823 A L D + + AR+ +P A +S Sbjct: 743 GLTLAELVGELRAAVTDTELEPRRRKLAARQLARLARDGVPGAHPEQWYGLAGNSSDRPL 802 Query: 824 LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 V + P+R + + + Sbjct: 803 REPDEVIRVSPSVVDTLVKCPLRWLLERHGGTDPAQL-------------SAVTGTLVHA 849 Query: 884 LLNALVEQDDAERL---FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP--- 937 L A E D + L A D F ++ + R Sbjct: 850 LAQAAAEGTDEQTLWKELDEAWAKVDAGAPWFSRKERVRVEGMVRSFLTWLRQSRDELTQ 909 Query: 938 ---GQSMEIDLACNG----VQITGWLPQVQPDGLLRWRPSLLSV------AQGMQLWLEH 984 Q M + L V +TG + +++ D R L + Sbjct: 910 HAVEQDMRVSLPEAEGEPSVALTGRVDRLELDAEGRPVVIDLKTSKSPVAKDAAAEHPQL 969 Query: 985 LVYCASGGNGESRLFLRKDGEWRFPPLAAEQAL 1017 VY + G G R + A Sbjct: 970 AVYQLATLLGAFSGHKGHTGGARLLYVGKPNAK 1002 >UniRef50_Q3F0Y3 ATP-dependent DNA helicase pcrA n=2 Tax=Bacillus thuringiensis RepID=Q3F0Y3_BACTI Length = 653 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 59/538 (10%), Positives = 148/538 (27%), Gaps = 82/538 (15%) Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 L ++ + Y Y + L +N + D QD Sbjct: 170 LAVSHIYQKYEDLKAIHNYFDYDDLLLKTVHLFQNNPELLGRYQNLFRYVLVDEFQDTNK 229 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFV-----------DVTPDNLLHNIQSDILELE 346 L + + + ++ Q + +F + P+ L +Q + + Sbjct: 230 IQFDLIEMLSQKHGNIFLVGDADQSIYSFRSAKIENILSYQKIHPETQLILLQENYRSTQ 289 Query: 347 NRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 N A ++ + + + I + RE + + ++ M + Sbjct: 290 NIVNASNSLVGNNKMRLEREAFSVSGVGDDIHVFRFNDASREADFVARMIVNMKKATQ-C 348 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 +D V+ F A D +PY I + ++ +S + + Sbjct: 349 DWKDFAVLYR-----MNFQSKHLELALRDENIPYKIVGTTSFYDRKEIKDLVSYIRASHN 403 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 + +++VP I + + + + +E I + + Sbjct: 404 LTDDYALERVINVP----SRKIGKTTIEKIYAFAHERRIPFFVA---------------- 443 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 Q++ S + V + + + Sbjct: 444 --------------------LQNIDEVAALSKINKSTVAKIKEFATLMQELSQLALVGEF 483 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA--VPLSLLRDEL 641 F + + + + + L+ E+ Sbjct: 484 SATKFMQTLIKKTDFMGQFDKEKEEDETRIENVTHLRDYARHWDAQEKEINSLAQFVSEI 543 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 D + + F V + ++ + + + ++G+ D V+P + Sbjct: 544 TLDGDSDEDEEDF----VTLTSVHSAKGLEWPETFVIGLEDDVFPHYRSKQKL------- 592 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF----PSVLVQELIDYI 755 S +++R L A+ A ++LY+++ + S++ PS + E+ D Sbjct: 593 -----SDLEEERRLMYVAMTRAGKRLYLTHSAFKYEYGSQKPIRQKPSPFLGEIPDNY 645 >UniRef50_B9XNK2 UvrD/REP helicase n=2 Tax=Verrucomicrobiales RepID=B9XNK2_9BACT Length = 692 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 53/521 (10%), Positives = 136/521 (26%), Gaps = 62/521 (11%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIY 312 P R + ++ + SE L VG+ + + G ++ Sbjct: 224 PEVREHYQRRFQFILVDEYQDTNALQSELIDLLAARHHNVMVVGDDAQSIYAWRGANFQN 283 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLDP 369 ++ F + + ++ I+++ N A A ++ P Sbjct: 284 IIK----------FPERYSEARVYKIETNYRSTPEILNLANAAISANVKQFEKQLTPARK 333 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 C + + + R+L + + + + V+ F Sbjct: 334 SGLKPVLVPCMTASEQASFVAQRMLEL--REEGVNMNQMAVLYRSH-----FHALELQLE 386 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 R +P++I+ ++ + + L ++ Sbjct: 387 LTRRNIPFSITSGIRFFEQAHIKDVAAYIKLVNNPRDELAFKR----------------- 429 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L Q + G + + ++ +L A + Sbjct: 430 ---LVQLLPGVGGKGADKLWARFQSAFKVIPENLQADARDTLLPSETSTKADRNPVATAL 486 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 +S + + A + ++ + + + + + + Sbjct: 487 QASASAVPKKTAVAWAQFVATISQLETEPVRGKTDKMIRLIVEAGYDEHLQENYANYRNR 546 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 +Q + + L+ + V + T+ + Sbjct: 547 LDDIEQLALFAQQFSTTEE-----FLAQLALLSNLEAETDEPANNDNEQVKLSTIHQAKG 601 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F VV ++ + DG++P + +++R L A+ A+ +LY+ Sbjct: 602 LEFDVVFIIMLCDGLFPSARS------------LDTAEGEEEERRLLYVAITRARNELYL 649 Query: 730 SYIGRSIQDNSE----RFPSVLVQELIDYIGQSHYLPGDEA 766 SY + + PS + EL L Sbjct: 650 SYPLIRMMPGGSGDAMQQPSRFLSELPKESLDEWNLKTINP 690 >UniRef50_D2MLK1 DNA helicase, UvrD/REP type n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MLK1_9BACT Length = 1180 Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 93/846 (10%), Positives = 212/846 (25%), Gaps = 138/846 (16%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS---DGEQDVGNPLLASWGKLGR 308 + +L+ R + + ++ + E L N VG+P + +G Sbjct: 380 DNEKIRKELVDRHQYYMVDEYQDTNELQYELVMLLTNELKSANLFIVGDPKQSIYGFRDA 439 Query: 309 DYIYLLS-----DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 D E + + + + + E + Sbjct: 440 DVRVFNKTKQKIVREDGKRISLTENFRSLRDVIGFVNYFFSHLMGPGNENEFEVEYEALT 499 Query: 364 KRPLDPLDSSITFHVCHS---PQREVEVLHDRLLAMLEE---------------DPTLTP 405 + + +I + E +++ R+ M+ + + + Sbjct: 500 QARHAKTNGAIEILIGQDGDPSANEYKLIAQRIENMITDAAETIRVRDKDGKLSERPIQY 559 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 DI +++ A + +PY + + + L+ ++ Sbjct: 560 DDIAILIRARTHLPDI-----EHALLEAGIPYLTTGGIGFYQRQEIYDIWNYLNFLNNPS 614 Query: 466 V-SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + + A+L P + Sbjct: 615 DSNISLAAILRSPAFGI-----------------------------------------SD 633 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 L + + W L Y L + L + Sbjct: 634 AELYEISLQKETKQEKKSFWDKTLDYQG-------CTEQLRCAIDTLKTHIEFARRMPVN 686 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 + + L + Q+ + G + L D L Sbjct: 687 RLVGTIVNETGLIGTLRTGKQGKQRWANYQKLLDLARNFDGDENRQ--ILPDFIDFLDIL 744 Query: 645 LDQE----RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND----GVYPRQLAPLGFDL 696 + +E + + +G V I T+ + F VV L ++ P A G Sbjct: 745 ITEEPREGQAPIKASSGAVQIMTVHAAKGKQFPVVMLPRLDKKGQTDQEPFIDAEFGIGF 804 Query: 697 MSQKPK----------------RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 P R + + + LF A+ +L +S R Sbjct: 805 SPLHPANDYQKTEPAIVNFMKSRANEKNVAEKKRLFYVGATRAEDRLILSGTLRDNS--K 862 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 + + ++ + L D + ++ + + H +P + Sbjct: 863 PQQMLEWLYTHLEIGEADNLLNLDVKQDVYKNGSTIDQHFRLQ---IPISRTLTDTTDTD 919 Query: 801 SYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTE 860 + + E +P + +P + L + P+R + L++ + Sbjct: 920 AASDETMPIEFPEDLPSALQPT----EVPTALSAPELANYARCPLRYQLENVLRI--PSI 973 Query: 861 DSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF-RRFRAAGDLPYGAFGEIFWET 919 PD++ ++ Y + Q + E D + L R +A + P A E Sbjct: 974 KQAEPDSDENEMKNAILYVLMQ-----IREPSDTQNLDTRIQQAFENFPEIADAETELRK 1028 Query: 920 QCQEM--QQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQG 977 +L + + + I +G + G + ++ D W+ + Sbjct: 1029 HINSFLDSELGQTALRASETETNQHIYADVDGHILDGRIDRLFRDETGHWQAIIYGTGDA 1088 Query: 978 MQ---LWLEHLVY------CASGGNGESRLFL----RKDGEWRFPPLAAEQALHYLSQLI 1024 E +Y C + + F +A + I Sbjct: 1089 QHPTVCSPEMELYSLLIHRCYPEQPTVKINIFFTEQGQCEKGHFSTTELAEAAGRWRKKI 1148 Query: 1025 EGYREG 1030 + G Sbjct: 1149 SALQRG 1154 >UniRef50_B4U5U9 UvrD/REP helicase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5U9_HYDS0 Length = 715 Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 68/616 (11%), Positives = 178/616 (28%), Gaps = 90/616 (14%) Query: 152 GHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRV 211 G + + L+K++++ + IE + + Sbjct: 114 GLSNDFRVLDEEDSVRLFKSILKDQDIKKDEAKKLYIAVNQAIEGIRFLDEDNKFDRKVL 173 Query: 212 FICGISALPPVYLQALQALGKHIEIHL-LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFE 270 + I L A+ + + + KD A+ + Sbjct: 174 ELKDI---------FLNAMIETSAVTFSYLMGAFKDMLQ--KDGAFRNYYQNFFDYIIVD 222 Query: 271 DRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLES--SQELDAFVD 328 + + E + D +G+P + ++S +E + + ++ Sbjct: 223 EFQDTNTAQYEIIKHISKKDNICVIGDPNQCIYEWRMAHPDNIISFIEDYNPEIIKLNIN 282 Query: 329 VTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEV 388 + + ++ +D+L+ + S + ITFH + ++E E Sbjct: 283 YRSSSEILSLANDVLKNSKAKWKELVPILKSHKKENQTYPK--PVITFH--PNEEKEAEW 338 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 + ++ + ++ +I ++V +I A +P+ I Sbjct: 339 IAKKIEEL---SKSVPLEEIAILVR-----VNYITNFLEQALVKAKIPHKIIGALRFFQR 390 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 ++ ++ L L + S + P + I E+ + + + I + Sbjct: 391 KEIKDILAYLHLAINPKDSISFQRAITNP----KRGIGEKTVEKIINLSKQKSI--DLIQ 444 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 L ++ + + R++ Sbjct: 445 ATKYVLGNKLFEENDFIKAMERLV------------------------------------ 468 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 +G A++R + ++ + + F + E + + ++ Sbjct: 469 ---YNLEKGQAKDRNISFYVEKLINDIRYFEYLEQEYKEDYQERIDNVKELLRFFEIEAQ 525 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 EL Q + ++ + V I T+ + + F+ V + + +G+ P Sbjct: 526 KHQENQKERLKELLQEISLMEEDEKDNSKAVKIMTVHKAKGLEFEAVFMPRLENGILPHS 585 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 A M +++R L + A++ L++SY S + Sbjct: 586 SAFSDVLDM------------EEERRLLYVGITRAKKYLFLSYTAAGKV-------SDFI 626 Query: 749 QELIDYIGQSHYLPGD 764 + + + +LP D Sbjct: 627 NIMDKTLLDTSFLPKD 642 >UniRef50_B2UPY5 UvrD/REP helicase n=2 Tax=Verrucomicrobia RepID=B2UPY5_AKKM8 Length = 669 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 60/520 (11%), Positives = 138/520 (26%), Gaps = 85/520 (16%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYI 311 A +R + ++ + + S L VG+ + + G D Sbjct: 225 QEHLRALYGSRFQHILVDEYQDTNYLQSRLIDMLAREHGQLMVVGDDAQSIYSWRGADME 284 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILE---LENRAVAGVNIEEFSRSDNKRPLD 368 +LS F P I+++ + + A + E R + Sbjct: 285 NILS----------FTTRYPAAKTFKIETNYRSVPEILELSNAAIAANEVQIEKQLRSVR 334 Query: 369 PLDS-SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 P + + + + + R+ ++ + P +I V+ + F Sbjct: 335 PTGEMPPALVPLNDDRMQAKFVVQRIRDLI--EEGTDPSEIAVLYR-----AHFHSMELQ 387 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 +P+ I+ ++ ++ + + + + I Sbjct: 388 MELTRGEIPFRITSGIRFFEQAHIKDVVAFMRFVVNPRDELSFRRM-----VMLLPGIGP 442 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + L + +S Sbjct: 443 GMAQKLWIRWTACPESR-----------------------------------QETPPESF 467 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + A+ L L+ P L + + + + E Sbjct: 468 SALMLDFPVPAKSRTAWTQLCYTLDELAPAGKLAGPASMLLSINEAVYDEYMQAAFENYD 527 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR--LDQERISQRFLAGPVNICTLM 665 +L+ D E + F G V + T+ Sbjct: 528 QRRQDLLHLAGFSERFEST--------EDFLSQLSLLGNTDDESAAADFSGGSVTLSTIH 579 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + + VV L+G+ DG++P Q GD + +++R LF + A+ Sbjct: 580 QAKGLEWSVVFLIGLCDGMFPHQRVIDD----------GDLAGLEEERRLFYVGITRAKD 629 Query: 726 KLYISYIGRSIQDNSE---RFPSVLVQELIDYIGQSHYLP 762 +LY++Y + + + PS + E + + + Sbjct: 630 QLYLTYPRWNCRAQGGTFMQMPSRFLDEFPAGLVEEWEVE 669 >UniRef50_C5QUC7 Possible ATP-dependent DNA helicase PcrA (Fragment) n=1 Tax=Staphylococcus epidermidis W23144 RepID=C5QUC7_STAEP Length = 433 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 46/452 (10%), Positives = 124/452 (27%), Gaps = 64/452 (14%) Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 + + I ++ + + E E + + M + ++ ++ Sbjct: 2 HNSERKPKGLWTANSGGDKIQYYEAMTERDEAEYVVKEI--MKHQRGGKKYSEMAILYRT 59 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 V +PY + + ++ +S L + + + ++ Sbjct: 60 NAQ-----SRVLEETFMKSNIPYTMVGGQKFYDRKEIKDLLSYLRVIANSNDDISLQRII 114 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 +VP + I + ++ + ++ I Sbjct: 115 NVP----KRGIGPSSVEKIQTYALQNNISMF----------------------------- 141 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 L + GL ++ S + + + E + Sbjct: 142 -----------DALAEVDFIGLSKKVTQECISFYEMIQNLIKEQEFLE-ISEIVDEVLQK 189 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 + D E + ++ + + L + L I + Sbjct: 190 SGYKDMLDREQSIESRSRLENLDEFMSVPKDYEENTPLEEQSLINFLTDLSLVADIDEAD 249 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 V + T+ + + F +V ++GM + ++P A D +++R Sbjct: 250 TQNGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKS----------EDDHEMEEERR 299 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDES 772 + A+ A++ LYI+ + + PS ++E+ + + SH + ++ Sbjct: 300 ICYVAITRAEELLYITNATTRMLFGRSQSNMPSRFLKEIPEDLLDSHTGQKRQTISPKSQ 359 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 R + T + + A Sbjct: 360 PKRGFSKRTTSTKKQVSSSDWKVGDKVMHKAW 391 >UniRef50_C1YL28 DNA/RNA helicase, superfamily I n=2 Tax=Nocardiopsaceae RepID=C1YL28_NOCDA Length = 714 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 106/705 (15%), Positives = 202/705 (28%), Gaps = 66/705 (9%) Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 D + + S +E V+ D L D + D+ V+V P V A Sbjct: 3 DGEVRVLLADSAAQEAAVIADTLRRAHLVD-GVPWSDMAVLVRSSTRQLP----VLRRAL 57 Query: 431 ADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSR--FVSEDVLALLDVPVLAARFDITE 487 +P A+ +D + P++ ++L+ + + LL P A Sbjct: 58 TAASVPVAVGADDLPVAAEPIVRPMLALIRYGLAPAELDEDAARELLTSPFGEADTVRLR 117 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 +R LR+ + G A R G G SAQ ++ Sbjct: 118 RLVRALRRLDLDRAHDGGAHG--------GAPEGDASREGAREERSGAYRPSAQLLVDAL 169 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD-------MLNAFFL 600 E + + E+ + L R A+ E+ L +L A Sbjct: 170 RDPAELTLVDPEIAAPATRVAQALRTVRDLNARGADAEQVLWELWRDSGLADRLLRASLA 229 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL--DQERISQRFLAGP 658 AA ++ + + ++LA + + Sbjct: 230 GGRRGAAADRDLDAVVALFESAARYCDRLPPGSPAGFLEDLAAQEIPGDSLAERAPEGEA 289 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK-----------PKRGDRS 707 V I T + + + +V + G +G +P + + Sbjct: 290 VRILTAHRSKGLEWGLVVVAGAQEGDWPDLRLRGSLLGVEELVDTDVHSADSSGAALASK 349 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 D++R LF AL A++ L ++ +G D PS + E+ G L Sbjct: 350 LLDEERRLFYVALTRARRTLVVTAVGGEDTDER---PSRFLNEMG-VGEPEPVSTGLRWL 405 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA--REWLPAASQAGKAHSEFVQPLP 825 + A +++ +T P R + R PA A ++ Sbjct: 406 SLPSLVADLRSVVTDPGAPEPLREAAATHLARLAEEGVRGADPAEWYALTPFTDDRPLAE 465 Query: 826 FTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL 885 V ++ F +R + + S + + +++ Sbjct: 466 EEDTIRVSPSQVESFTNCQLRWLLERAAGASSGDSASALGTVVHAVAVLVAQGS------ 519 Query: 886 NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME--I 943 D+ A D + +++L D A + E Sbjct: 520 ----TPDEISGRMDEIWADLDFGGPWQARAQRDRADTMVRKLVDWEAANDRELVVTEEGF 575 Query: 944 DLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL----WLEHLVYCASGGNGESRLF 999 + G++ITG + +++ D R + + + VY + G Sbjct: 576 RVDVGGIEITGRVDRLERDDQGRAVVVDIKTGKNKADDLARHPQLGVYQMAVLKGAFAKL 635 Query: 1000 LRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGA 1044 + AL + + I+ RE PL P+ G A Sbjct: 636 GLTE--------PGGAALVQVGEKIQRAREQPQPPLSEDPDPGWA 672 >UniRef50_Q123W9 UvrD/REP helicase n=16 Tax=cellular organisms RepID=Q123W9_POLSJ Length = 716 Score = 194 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 69/527 (13%), Positives = 138/527 (26%), Gaps = 91/527 (17%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIY 312 A K ++ + E L + VG+ + +G G Sbjct: 215 EAVRNKWQQSLGHVLVDEYQDTNATQYEVLKLLVGTRGRFTAVGDDDQSIYGWRGATLDN 274 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILEL-ENRAVAGVNIEEFSRSDNKRPLDP-- 369 L + P+ + ++ + A I + K Sbjct: 275 L----------KKLPEDYPNLKVVKLEQNYRSTSAILRAANNVIGPNPKLFPKTLFSELG 324 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL-------TPRDIIVMVADIDSYSPFI 422 + C S + E E + R+ ++ +D V+ P Sbjct: 325 EGEPVRVVDCDSEEHEAERVVARIQSLRAGGELQAVGSQYKEWKDFCVLYRANHQAKP-- 382 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 A +PY +S ++ ++ S + L + + + + P + Sbjct: 383 ---LEKAFRKAQIPYKVSGGQSFFDRAEIKDLCSWMVLLVNNDNNPAFMRSVTTP----K 435 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 I L L + ++ Sbjct: 436 RGIGHTTLGTLGTFADQY---------------------------------------KLS 456 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 ++++ SS L A+ VG L LN + E+ D L Sbjct: 457 LFEALFSNSLSSVLPAKAVGSLQEFGRYLNELEYRARRTVGAEDARTFLNDWLKEIDYEK 516 Query: 603 A-----ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS---------LLRDELAQRLDQE 648 ++E G S + + + Sbjct: 517 HLYDGEDSEKVAAARWSNVMDFCDWMALRCGGQIDDTSGAVVESEKKTMLEVVQTIALLS 576 Query: 649 RISQRF-LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 IS+R V + TL + + + V L G N+G+ P +L Sbjct: 577 TISEREGDQNVVTLSTLHASKGLEWPHVMLAGCNEGLLPFKLEEDDGSNTDNIAL----- 631 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELI 752 R ++R L + AQ+ L ++++ R ++ PS + E+ Sbjct: 632 RLQEERRLMYVGITRAQRTLAVNWLRRRKKNRDTIAGIPSRFIAEMA 678 >UniRef50_D0LEA2 UvrD/REP helicase n=3 Tax=Corynebacterineae RepID=D0LEA2_GORB4 Length = 1129 Score = 194 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 135/1088 (12%), Positives = 275/1088 (25%), Gaps = 179/1088 (16%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPA 66 S + ++ + ++ PE +LV L+ AA + Sbjct: 65 SGKTALIVDAAVARLRAPDVE----PESVLV------------LASSRQAAATLR----- 103 Query: 67 SFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQ 126 ++ RVL ++++ L L + + F +LR + ++ Sbjct: 104 ---EEITRRVLAGSDATD--GRRALGGALREPLVRTVHSYAFAILRLQASAHNNPPPR-- 156 Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHR 186 L+ + + A W A L AL Sbjct: 157 ------------LITGSEQDVVLRELLAGDIEDGAGYWPAHLRPALGTD---------GF 195 Query: 187 ANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRY 246 A + + P L + G P ++ A +A ++ + LL Sbjct: 196 AQALRDLMMRAAERGAGPEELAAL----GRRHRRPEWVAAARAYAQYEQNMLLRGAVGLE 251 Query: 247 ------------------YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF- 287 DP L R R +D + + ++ + Sbjct: 252 APGASAPAVDAAELVGSALSAFATDPELLIAQRARIRHLLVDDAQHLDPQAAQLVKLIGT 311 Query: 288 NSDGEQDVGNPLLASWGKLGRD--YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL 345 + + + +G G D + L++ S +++ + + + + + Sbjct: 312 GTTSTLIAADTDQSVFGFRGADPRFADDLAEPGSDRDILLDTNFRSEAQIERVGRVLASR 371 Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 A + V S +E + D L D + Sbjct: 372 LPGARP-----HPYPQAPAESPATGAGGVQVRVFGSSAKEATAVADLLRRAHLFD-GVPW 425 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL----- 460 + V+V + P ++ F SA + + A + +L + Sbjct: 426 SRMAVIVRSVSLALPPLRRAFRSAGVP---LTTPASGLPLHRQRAVVALMLVLRVVAART 482 Query: 461 ---PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 F ED ALL P+ AA R R S R L Sbjct: 483 TPAQADDFDIEDAAALLSGPIGAAD---PGAMRRLRRGVRRSSEKRGDDGAQQDSLTALR 539 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 + R L A + V+ E Sbjct: 540 SAILDPLLAARYREDLTDAERAPLDRVLDVVAAAEKVHTAG-------------RGLEET 586 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 L + + + + ++A Sbjct: 587 LWAGWQATGLERRWAASAVRGGPGGEQADRDLDAVMAMFEAAANFADTLPAAGPAGFVHY 646 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP------ 691 +L + ++ + + V + + + VV + G+ DG++P + Sbjct: 647 LGQLQ--IPRDSRTATAASDSVTVLSAHAAVGREWDVVAVAGVLDGLWPSLRSRGSVLAT 704 Query: 692 -------LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 G D + + D+R L L A A+++L ++ + + E P Sbjct: 705 GQLVDLLDGVDPDAVDKLARPAAAIADERRLLLVACTRARRRLLVTAV---EDGSGEASP 761 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT---------------RMPF 789 S + E+ D + S + +E MP Sbjct: 762 SRFIGEIADALAGSTQDADADTPAPEELPLDPGVDRVLSLPSLVATLRSVVTAGVGEMPD 821 Query: 790 DPQNYQPGERQSYAREWLPAASQAGK-----AHSEFVQPLPFTLPETVPLETLQRFWAHP 844 + A +P A S+ P + + Sbjct: 822 ERTMAAARLLARLADADVPGAHPRDWYGLAAPSSDAPLWTPDDGAVVLSPSNVDALTRCS 881 Query: 845 VRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAA 904 +R + + + + L+ A+ + D + RA Sbjct: 882 LRWLLERNGGRDGDGTPALT-------------GSLVHTLVQAVAGELDPTEVTEALRAI 928 Query: 905 GDLPY---GAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN----------GVQ 951 D G + E + + + R + ++LA + V+ Sbjct: 929 WDRVDTGAGWYSARELERAESMLVNFREWLRISRSDLDEVGVELAVDATIPATPDDPAVR 988 Query: 952 ITGWLPQVQPDGLLRWRPSLLSVAQGM------QLWLEHLVYCASGGNGESRLFLRKDGE 1005 + G + +++ DG R + A+ Q + Y + +G L D Sbjct: 989 LRGRMDRLERDGAGRPVVVDVKTAKTPISKADAQDHAQLAAYQVALAHG--GLTGADDAV 1046 Query: 1006 WRFPPLAA 1013 P A Sbjct: 1047 VSAEPGGA 1054 >UniRef50_A0JYL5 UvrD/REP helicase n=4 Tax=Actinomycetales RepID=A0JYL5_ARTS2 Length = 1183 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 125/1051 (11%), Positives = 250/1051 (23%), Gaps = 171/1051 (16%) Query: 121 KRKLFQLSSKAADLFD-QYLVYRPDWLAQWETGHLVEGL-GEAQAWQAPLWKALVEYTHQ 178 + +QL+S+ + FD +Y +R + + G E A + + L+E + Sbjct: 154 GAQAWQLASEVVEAFDGEYEHFRAAKSTLVKAVIQLAGECAEHLRDPAEVQEWLMERVAE 213 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 + ++A L +R + + + AL + L Sbjct: 214 FEGLPYVAGAKKNPT----QAAGELGAMLRTRASVAEMVGRYADAKRVRGALDFGDLVAL 269 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGN 297 P R + ++ + +LF VG+ Sbjct: 270 AARVASEI-------PLAAEVERQRFKVVLLDEFQDTSHAQLVLFSRLFGGGHAVTAVGD 322 Query: 298 PLLASWGKLGRDYIYLLS--DLESSQELDAFVDVTPDNLLHNIQS--DILELENRAVAGV 353 P + +G G L + D+F L ++ +IL N A + Sbjct: 323 PNQSIYGFRGASAGQLFHFVREFPALAGDSFAVAPTSYLTTAWRNGRNILSAANVISAPL 382 Query: 354 NIEEF--------------SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA--ML 397 + + + + + + E + +L + Sbjct: 383 SAAALQAGPAGERQSAGSVEVPPLQPSPAAAEGKVVIGRFATDEDEARAIAADVLRYRLT 442 Query: 398 EEDPTLTPRD----IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 + + + + V+ R +PY I P + Sbjct: 443 DFEEPVGADRVAPAMAVLCRRRAQ-----MECVRREFELRGIPYEIVGLGGLLDTPEIVD 497 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 ++ L + S+ ++ L + AR+ I L R W + R G + E Sbjct: 498 LVATLRVLADPGRSDSLMRL----LAGARWRIGPADLMAFRDWSSFLARRRGNPRTDADE 553 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 + P +E+ + L + L +L +L Sbjct: 554 ADDPDAAVIES----DITDSPSLVEALDWLPREGWTSAHGRTLSPAALDRLHALSAELRQ 609 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY-GDAV 632 R + + L L + A ++ + A G + V Sbjct: 610 LRGFMGDD--LTTLLGEVERAMLLDIEVAARPGVSIHQARRNLDAFHDAAAGFLHTSHRV 667 Query: 633 PLSLLRDELAQRLDQER----ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + L +E + V + T+ + + + VV + G+N G +P Sbjct: 668 DVLAFLAWLEAAATEEGGLDVAAPEVNHEAVQLLTVHASKGLEWDVVFVPGLNAGAFPSS 727 Query: 689 LAPLGFDLMSQKPKR--GDRSRR-----------------------------DDDRYLFL 717 + P GDR+ ++R L Sbjct: 728 RDSRWSSGSAALPWPLRGDRADLPQWDTDQPDQKGWLDAEKNFKADVQAHGEAEERRLAY 787 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 A A+ L++S S + EL G A Sbjct: 788 VAYTRAKFVLWVSSAAWVGSRAGMAEMSPFLSELAPLAGIGAGEAETVAAEGSTRGRTEA 847 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETL 837 A T ++ P E L + + Sbjct: 848 AAGTAAVVHAASVEESLVPAESPLTQDLELAHWPYDPLEGPADPRTGARLRLVPGRRAAM 907 Query: 838 QRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ-----LLNALVEQD 892 + + L TE + D L + N LL + Sbjct: 908 EA-----AAGRVREALAAGPDTEPAADSDAGE-GPRQLRSFAANWAKEADLLLERRHRRA 961 Query: 893 DAERL-------FRRFRAAGDLPYGAFGEIFWETQCQ---------EMQQLAD------- 929 + + F GD P + + + Sbjct: 962 TVQDVHLPGHISASTFVDLGDDPAAVLARLRRPVPREPGMSARKGTAFHAWVEEHFGKAG 1021 Query: 930 ------------------------------RVIACRQPGQSMEIDLACNGVQITGWLPQV 959 + ++ V + G + V Sbjct: 1022 MLELDEAPGSDSHIDEAYGLDSMVETFRNSEWAHRAPAHVEVPVETRIGEVVVRGRIDAV 1081 Query: 960 QPDGLLRWRPSLLSVAQGM----------QLWLEHLVYCASGGNGE-----SRLFLRKDG 1004 D W + QL + L + G + ++ ++ Sbjct: 1082 FRDADGGWDLVDWKTGRRPAAGQLKVKAVQLAVYRLAWARLKGVPLDSVRAAFYYVGENQ 1141 Query: 1005 EWRFPPLAAEQALHYLSQLIEGYREGMSAPL 1035 R L + L ++ G +A L Sbjct: 1142 VVRPHDLGTAE---QLEDIVTAALGGTTALL 1169 >UniRef50_C2KVH9 ATP-dependent deoxyribonuclease subunit B n=1 Tax=Oribacterium sinus F0268 RepID=C2KVH9_9FIRM Length = 1162 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 124/1082 (11%), Positives = 266/1082 (24%), Gaps = 178/1082 (16%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQST---GMAQWLQMTLSQKFGIAANIDFP 63 S + + L E D LV M + + + + N+D Sbjct: 13 SGKTEYLIRKALQ----EAGKDYHRQIYYLVPEQDTLAMQKRIVSHIENQGKGILNVDVL 68 Query: 64 LPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRK 123 + F ++S + L E +LR L + Sbjct: 69 SFQRLYYRAFE----NTNQKSPLS--------------LDEMGKMMILRLILGKKKKQLS 110 Query: 124 LFQ-LSSKAA---------DLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALV 173 +Q + + QY V P+ L + A +++ + Sbjct: 111 YYQREAESLSFVEECKSQISECMQYKVS-PEDLRKCAEKSKRSITRAKFLDLAYIYEEFL 169 Query: 174 EYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKH 233 Y R L + I L T + + G + P+ L ++ L + Sbjct: 170 LYL--SRTGRITEEGLADQGISALWKDNTLKDSI---LIFDGFTGFTPIQLLCIEVLMEK 224 Query: 234 IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ 293 + + L E E L ++ + Sbjct: 225 AGELYFSLEFSGKNISALGNGKKRESLFYLTEEAIKELYHRGEKLGVEILSPLSLNEIDS 284 Query: 294 DVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH--NIQSDILELENRAVA 351 G L F + L +Q + E + Sbjct: 285 RTG------------------EARPEGALLPRFEKIPALQTLVEGFLQGENKESGTKEEQ 326 Query: 352 GVNIEEFSRSDNKR--PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 E +S L I+ + REVE + ++ E+ ++I Sbjct: 327 SPKTESMDKSKPYTGGVYPSLPHGISVIEAANISREVEEACSHIRYLV-EERGYRYQEIG 385 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 V++ D++ Y F +P + + P + S L + + + + Sbjct: 386 VVLPDVELYRD----AFFQQGRKFAIPLFLEEDIKLFDSPFSKVLRSALEVMEKGLLYDS 441 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 L R E+ + L G++ + Sbjct: 442 FFRYLR--AFPYRGMEEEDRIDALENEARAKGLKG--------------------KSAFR 479 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 + ++ A+ + + E L + L + L LEE Sbjct: 480 SLFQEESLLEAEALFSLLEE--------NEGSHSLKERIESLESFTEKLMALFQLEEEAI 531 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 ++ E Q Q ++++ V L E+ Sbjct: 532 FLKNEGMDSLSQSLERS------VSQIQLLLSKMKEGLGEIPVNKKEFSAFFDMALSLEK 585 Query: 650 ISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK-------- 700 + Q V + L R K LG N G+ P +K Sbjct: 586 LRQIPATNDQVLVGDLTRSRFHNPKAFLFLGFNAGLIPLPPKKKSLFTEEEKSFLRQEHC 645 Query: 701 -PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 + A +S +++LY+SY R + S ++QE + + Sbjct: 646 TLSPLAWEESYIQEFYLYHAFLSPKEELYLSYPLRIPKGRGGI--SPILQEALRLFPKLK 703 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMP---------------FDPQNYQPGERQSYAR 804 + + +S ++ K L+ ++ F +++Q Sbjct: 704 IRKLEREIQEMQSFSQAKDSLSKELPKLCKKEVLFRSEEEVLPYFHLESFQLLHSLWQKE 763 Query: 805 EWLPAASQAGKAHSEFVQPLP---------FTLPETVPLETLQRFWAHPVRAFFQMRLQV 855 E+ + +A + LP + + L+ F + L + Sbjct: 764 EYKKDLEKLLEAIFWENRHLPLSKELSKGLYGEKIRGSVSRLEGLNRCAFFHFLRYGLHL 823 Query: 856 NFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ------------DDAERLFRRFRA 903 R E ++ + +L+ + ++ + + A Sbjct: 824 QERKEAE---------IQAFDLGNLYHKLVESFFKKLKEEKLKGEVLSEHFQEYLNFAIA 874 Query: 904 AGDLPYG-----------AFGEIFWETQCQEMQQLADRVIACRQPGQSME--IDLACNGV 950 + F F E + L ++ +++E + + Sbjct: 875 ESEQDPEFAPFLEGGRNQYFLHKFKENAKTILWVLERQLSGGDFQVEALERDFHYESDTL 934 Query: 951 QITGWLP----QVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEW 1006 G + + + + + L ++ + Sbjct: 935 SFRGRVDRVDSYLDEEKNYYLKVLDYKSGNTDFSLDLLKAGLQIQLPLYLSILLEEERKR 994 Query: 1007 RF 1008 Sbjct: 995 HP 996 >UniRef50_Q057F6 Exodeoxyribonuclease V, g chain n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q057F6_BUCCC Length = 1042 Score = 192 bits (486), Expect = 9e-47, Method: Composition-based stats. Identities = 144/767 (18%), Positives = 348/767 (45%), Gaps = 24/767 (3%) Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 + ++ + ++K+ ++ D+SI+ + C S EV+++++ + LE + + DI++ Sbjct: 289 ILKKKIYKINSKKKININDNSISINQCKSYIHEVQIVNNYIHKTLETNKKIKLDDILITA 348 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 ++ID Y P+IQ +F + ++ L + + + +L LL++ ++ F +L+ Sbjct: 349 SNIDIYIPYIQKIF-NFSQNKNLLIKKTGKEEEKKKEILLTIKDLLNIKNNYFKPFWILS 407 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 LL++ +L +F I ++ L + ++ I +G + + +E +P ++W + + R+ Sbjct: 408 LLNIKILRKKFSIKNRDIKTLGKLISHLNIAFGFNKKHYKEFSIPDLKTYSWEYAIKRIT 467 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 G+ + + ++ Y+ S+ L+G+ + + QLN R+ + +++ +E+W+ + Sbjct: 468 SGFIFNNKNTIYNNIYTYNISNDKKNILLGNFINFIKQLNKLRKKIYKKKKIEKWINIIS 527 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 ++ FF + + + L++ W+ I G+ + + + +E + Sbjct: 528 IIIKNFFYIEKKDKKFFFLLKNIWKKNIFYGIKINFLKKISIEFFINEFFKNHSLLYKKN 587 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 +FL+G + + L + IPFKV+C+LG +L+ +K K + Sbjct: 588 QFLSGNIKLINLNKINLIPFKVICILGCTQEKISLFNNQDILNLIEKKNKNNEN------ 641 Query: 713 RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES 772 +FL+ + ++ L++SYI + N +PS + ++I YI + Y + + Sbjct: 642 --IFLKTIFLTKKYLFLSYIKNNYIQNK-YYPSKFILDIIFYIKNNFYYFKKKEKKKIQK 698 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV 832 + + + + + + + + Sbjct: 699 KNFLNKIYKKNKNNIINSLFSKEKKKIIKTKKNQKKYKKINITIQKKIKIKKLIN----- 753 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRT-EDSEIPDTEPFILEGLSRYQINQQLLNALVEQ 891 FW +P+ FF+ L+VN + E++ + E F ++ L++Y+IN +L ++ Sbjct: 754 -------FWKNPIEYFFKNTLKVNIKNYEENMFIEDEYFSIKPLNKYKINSLILKNMLLN 806 Query: 892 DDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQ 951 + + F+ LP +I W + +++ L++++ R+ +++ I Sbjct: 807 KKTDYHIKEFQLKNKLPQEKIAKILWYEKIKKINILSNQIKKIRKFPKNIHIYYKFKKYY 866 Query: 952 ITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPL 1011 ++G + +V L++W + + + W++H++YCA +S L + + F + Sbjct: 867 LSGKIKEVNKLNLIQWNVNKIKFKDIITTWIQHIIYCAFEKPKKSILLSTNNKKIEFLSI 926 Query: 1012 AAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKF 1071 + A YL + I+G+ +G P+ ++ SG WL T + + + + + L A+ F Sbjct: 927 KKKIAKKYLKKYIQGFIDGHKKPI-LILNSGIHWLHTIFLKKENVLKINKYNLNLAKKNF 985 Query: 1072 LQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFR 1118 L+ + G+ GE +I+ +++ L ++ I + ++LP+F+ Sbjct: 986 LKIWNGSNFFLGEKKNIFIKKIIPILNKNLIKKICNSCKYWILPIFK 1032 Score = 91.2 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 79/179 (44%), Gaps = 9/179 (5%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 ML++Y SN+++ L + + ++ E+ L+++ + +WL++ ++ K I NI Sbjct: 1 MLKIYQSNKINFLLKKICKKIYIKKKKKILINEIFLIENKYVQKWLELYIANKKKINFNI 60 Query: 61 DFPLPASFI-WDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 F L F+ + + K F K+ + W ++ ++ + +L Sbjct: 61 KFILLFRFLNNFFKKNNIKKNKKLIIFEKKYLQWIIILIIYNTYDC-------SFLKKYG 113 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQW-ETGHLVEGLGEAQAWQAPLWKALVEYTH 177 + K F+ S A++F QY+ ++P + +W + + WQ LW +++ Sbjct: 114 IQYKNFEFCSHIANIFIQYIYFQPHLIYEWENNKKSKKKEKKTYQWQKKLWNLIIKKIK 172 >UniRef50_A8ZTY6 UvrD/REP helicase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZTY6_DESOH Length = 616 Score = 192 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 57/504 (11%), Positives = 136/504 (26%), Gaps = 86/504 (17%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 + R ++ + + G L D VG+ A + G + + Sbjct: 197 DDVRRRYQERFEFILVDEYQDTNNLQEDLTGLLCRGDNLFCVGDDWQAIYSFRGSNMRHF 256 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRP--LDPLD 371 LS F D + ++ + + +I +++ + + Sbjct: 257 LS----------FEQRYADARVFKLEQNYRSADTIVRVANDIIDYNHDKMDKTCFSEESG 306 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 ++ + E + + + + + + V+ F F A Sbjct: 307 GTVEIYEFDDEVEEARWVARKAEEL--NEDGVPYDAMAVLYRT-----KFTSLYFEHAFR 359 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +PY + R + S L ++++P Sbjct: 360 RAGIPYHLLGDRGFYDRKEVMDINSYLMAAVFEKDDTAFERIINIP-------------- 405 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 R G+ + + TG + + + L + Sbjct: 406 -----------RRGVGAKTLASINDMRTGAMSLQAAVHLALAERRLSD------------ 442 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 ++ L+ L+ L+ R + + + E + LN T Sbjct: 443 -------KVYQALSDLMALLDDIRD-MRPDAAIREVIERI-GYLNYLKQYADAGSMDFTE 493 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + +I+ + L+ + L +E VN+ T+ + + Sbjct: 494 KVENIDQLISAAARMES-----LTAYLE--EAALIREDKDDEEGGFGVNLATIHAAKGLE 546 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F V ++G + + P + D + ++ R L A A + L+++ Sbjct: 547 FHTVFVVGCEENLLPHWKSLEEEDDLQEE------------RRLMYVAATRAARCLFLTA 594 Query: 732 IGRSIQDNSERFPSVLVQELIDYI 755 G S + E+ + Sbjct: 595 AGFR--KGQFNRRSRFLFEIERSL 616 >UniRef50_Q1Q1J4 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1J4_9BACT Length = 1099 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 140/1007 (13%), Positives = 301/1007 (29%), Gaps = 162/1007 (16%) Query: 167 PLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQA 226 L + + + +Y+R I L +PS I S++ + Sbjct: 68 LLAREICRNSKNDIGHIRQEPFIYERIITKLIEQERH--HIPSLKNIISPSSIARSMFHS 125 Query: 227 LQALGKHIEIHLLFTNPCRYYW---GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 LQ L DI+ + +++L T + +A Sbjct: 126 LQDLTDANVNADDLRAVINEQLTGGADIQKLSDISRLFTLFQNTLNASGISHDSNLYRSA 185 Query: 284 GQLFNSDGEQDVGNPLLASWGK-----LGRDYIY---------LLSDLESSQELDAFVDV 329 + +LA +G + +D+ L + + + +V Sbjct: 186 AKHAADSEYLRKFKYILA-YGFYDLTGVEQDFFSEIFRYYPTILFLPYKKNHAVFTYVKH 244 Query: 330 TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKR-------PLDPLDSSITFHVCHSP 382 ++ L I DI +L + G + + S+ K P P +++ Sbjct: 245 FYESFLLGIARDIEDLPPDDLQGFSYLMDADSETKTSLHGESMPDAPSLDNLSIINVSGK 304 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 E+ V+ +L ++ + DI ++ ++ Y IQ VF +P+ D+ Sbjct: 305 HDEIWVIAKEILKLI--NKGYVFGDIGIVARELGQYLNIIQEVFQE----NAIPFTTLDK 358 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + +P+ LL L F V+ +L+ P + + + Sbjct: 359 EPIEKYPLFTMIKQLLLLDRENFYRPMVIDILESPYFN------------IPVPELKDVL 406 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 D + +G W L ++ A + + + + + + Sbjct: 407 SRQNLWDIISRTNGIHSGIRCWLSKLEQLKNAMAEPAEEDI------LPHNINISCDQIE 460 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET------EAAMTLIEQQW 616 L +++ L+ L ++ + + L+ + +E + + + E+ + Sbjct: 461 SLKNIVQLLSNDLLSLQEKATWSQMCQKTKLFLDKYIHIPSEDIDQEIIKRDIFIKERIF 520 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PVNICTLMPMRSIPFKVV 675 + + + D QE I V + M R IPF+++ Sbjct: 521 CLFDTLSILDRIDKEITYDQFADTFINACKQEGIQAGTANNKGVRVMNAMSARGIPFRIL 580 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGD------RSRR---DDDRYLFLEALISAQQK 726 L+G+N+ +PR + F + + + +++R LF L +AQ++ Sbjct: 581 FLVGLNEKEFPRAIFEEPFLPDHTRRILSEALGNHIPEKLRGFEEERLLFYFLLNAAQER 640 Query: 727 LYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD---------------- 770 +Y+ Y RS + + PS + +++ I H D+ Sbjct: 641 IYLLY-ERSDEAGKPKTPSHYIMDILQNIKGIHTRNEDKENKSPVKMNVPRSIKNKLCKE 699 Query: 771 ----ESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE---------WLPAASQAGKAH 817 + + H P N G +Y R + P S Sbjct: 700 DISLLTPNEAVIRMVLEH-IDPSCCINAIGGNLAAYTRSKSALQAIECFSPYLSAYDGIV 758 Query: 818 SEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR 877 S+ + + L+ F A P + F + LQ+ E E L L Sbjct: 759 SDGEHWYKNRVQKGFNPTMLETFGACPFQFFMREILQLEPLEEPE---KGETISLPKL-- 813 Query: 878 YQINQQLLN----------------------ALVEQDDAERLFRRFRAAGDLPYGAFGEI 915 I ++L+ + + E + + +PY E+ Sbjct: 814 GTIYHEILDTLYCHLKEKGYFDGKAADTNPVEYLHKIANESFVKMGKQIP-IPYPLLWEL 872 Query: 916 FWETQCQEMQQLADR-VIACR-------QPGQSMEIDLACNGVQ------ITGWLPQVQ- 960 + + + +++ L + G + ++ Sbjct: 873 KKDEIVAALIHFLSWDIKQIEHTGYSPAFLEARLQLALPKGKFEDYPAIFFKGKIDRIDV 932 Query: 961 --PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALH 1018 + +R + EHL+ A G P A Sbjct: 933 KKSGQEIYFRLVDYKSGK---AGTEHLLKAAVCGQKLQL------------PFYISMAEQ 977 Query: 1019 YLSQLIEGYREGMSAPL-LVLPESGGAWLKTCYDAQNDAMLDDDSTL 1064 +L + YR+ +S P ++ E+ ++ C + +N +T+ Sbjct: 978 FL---VNTYRKEVSLPSEIIFDEASFVYIARCMNDENGERCLQKNTI 1021 Score = 88.1 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 92/296 (31%), Gaps = 21/296 (7%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAA-N 59 ML + + LE + + +DP P ++V + M + LQ L +K ++ N Sbjct: 1 MLSIKFGHYHPSLENSFVETLHTIKSEDPLSPIAVIVPTNYMLERLQERLVKKHDVSFLN 60 Query: 60 IDFPLPASFIWDMFVRVLPEI--PKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD 117 + F ++ +I ++ F + + KL+ ER L++ ++ Sbjct: 61 VFFLNFYLLAREICRNSKNDIGHIRQEPFIYERIITKLIE-----QERHHIPSLKNIISP 115 Query: 118 DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTH 177 S R +F D V D A + + + L+ + Sbjct: 116 SSIARSMFHSLQDLTDA----NVNADDLRAVINEQLTGGADIQKLSDISRLFTLFQNTLN 171 Query: 178 QLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIH 237 G H +NLY+ + + + G L V + ++ Sbjct: 172 ASGIS--HDSNLYRSAAKHAADSEYLRKF--KYILAYGFYDLTGVEQDFFSEIFRYYPTI 227 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ 293 L + Y + LL R E D + L ++D E Sbjct: 228 LFLPYKKNHAVFTYVKHFYESFLLGIARDI-----EDLPPDDLQGFSYLMDADSET 278 >UniRef50_C1V6P7 ATP-dependent exonuclease V beta subunit, helicase and exonuclease domain-containing n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1V6P7_9EURY Length = 1152 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 87/795 (10%), Positives = 194/795 (24%), Gaps = 110/795 (13%) Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL 317 ++ R ++ + + L D VG+ A + G + +L Sbjct: 356 EEIAARWDYVFCDEFQDTDRLQFDLVKSLVTDDNLFVVGDDDQAIYEWRGAHVANITDEL 415 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP-LDSSITF 376 + + + P + IL+L N A+ ++ E ++ + +I Sbjct: 416 DRAFAALS---DEPLEENFRSRQPILDLANEAIQKLDHRERHKTLKRVDEPEYDGDTIAT 472 Query: 377 HVCHSPQR-----EVEVLHDRLLAMLEE--DPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 ++ + LL+ E D P DI ++V D +P I Sbjct: 473 VELSDEDDADGASQLRTVVQNLLSGAAESFDEAYDPGDIALLVRKNDHATPVI-----EE 527 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 D +PY ++ A + + L + L R+ + + Sbjct: 528 FEDAGIPYQVAGDLA-TESVGVGTVTAYLKALARPEDEVSWNRV-----LLMRYRLCDTD 581 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 LR L + ++ L Sbjct: 582 LRKLNAGDD---------------------------------------PLVDTLRETPLD 602 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 E +AE H+ LL + L D+ N + + + Sbjct: 603 EFEEPDRVAEARKHVTELLA--------IRDSASLSHLYRELTDVTNIEWYLSEQERRDL 654 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVP--LSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 +E + + L + VN+ T+ Sbjct: 655 AQLEDVIEQYGDSAVQPPLTPEFIDSLEHYDSLFDESGSSPTSQPDVADDAVNVMTIHKS 714 Query: 668 RSIPFKVVCLLGMNDGVY-PRQLAPLGF---DLMSQKPKRGDR--SRRDDD-RYLFLEAL 720 + + F VV + + G + P + + R + R +F + Sbjct: 715 KGLDFPVVLIPQVTAGEWAPSSRTYDALETSLSDGAEAAFAEDFVERDARETRRVFHVGI 774 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 A+ L + S V E++ G L D + + + Sbjct: 775 TRAEDVLVLQGGSEDDDATDVHPVSESVDEILPSRIPWQPERGQLPLWADVQDCLPREAV 834 Query: 781 --------------------TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF 820 + + E P A + + Sbjct: 835 DWTDTLATETVGHVGGTVNHAGEELAVAAARDRVLDLATATLNGELSPRAERETLQVASL 894 Query: 821 VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQI 880 P + + +L + P + + +++ + + + Sbjct: 895 TDPSTPSPSLSHSYTSLAAYEECPRSHYLDYVVNAFPDYQETTVRSDSGGGVSQREIGLL 954 Query: 881 NQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD-RVIACRQPGQ 939 +Q R + L E + + + + + C Sbjct: 955 FHDTAEQAAKQGVKRR-GDWYEICERLASHRRAEDALTAAKECIDRYFELELPNCEIIDA 1013 Query: 940 SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW-------LEHLVYCASGG 992 E +L +G ++ G++ V + + + L C Sbjct: 1014 EREFELDIDGHELVGYIDAVYRTPDDGLLVIDYKATERHRDLEDDKQLPIYLLACCDLYD 1073 Query: 993 NGES---RLFLRKDG 1004 + ++ + G Sbjct: 1074 EPVTRAGYAYVGEIG 1088 >UniRef50_D1V906 UvrD/REP helicase n=1 Tax=Frankia sp. EuI1c RepID=D1V906_9ACTO Length = 1243 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 107/823 (13%), Positives = 181/823 (21%), Gaps = 120/823 (14%) Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLE 318 L + + ++ + LF VG+P A +G G L Sbjct: 399 LRRQFQVVLLDEYQDTSVAQRRLLAGLFGGGHPVTAVGDPAQAIYGWRGASVGN-LRRFP 457 Query: 319 SSQELDAFVDVTPDNLLH--NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITF 376 L +L L N AG+ ++ S + RP L Sbjct: 458 EHFRRLGGDPAQVHQLTVNQRSGGRLLTLANAVAAGLPVDARSVTLRPRPAVALAGETIV 517 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRD----IIVMVADIDSYSPFIQAVFGSAPAD 432 + S E L +L A L PR+ V+ + A Sbjct: 518 ALHTSWAEEAAWLAGQLAARLRAASPGDPREPGPSCAVLARSWADVPALV-----DALGA 572 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 LP + + P + ++L + D + + LL P L L Sbjct: 573 AGLPVEVLGLGGLLTKPEIADIRAMLEVLDDPTANPAMTRLLSGPRLRL----GPRDLAA 628 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L G + LP + A E Sbjct: 629 L-----------GRRAAELARSGLPG-RPRAVTAPADPLAEAVADVDPSDVVSLADALAE 676 Query: 553 SSGL-IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 AE L + +L R L V L+ A Sbjct: 677 PGDEVSAEATRRLRAFADELAELRGHLGAGLVELVHRVVETTGLDVELELAAPRGGRGRE 736 Query: 612 IEQQWQAIIAEGLG-----AQYGDAVPLSLLRDELAQRLDQER---ISQRFLAGPVNICT 663 + + A+ L+ L+ ER V + T Sbjct: 737 NLAAFLRVAADFERSAAGFDDASGRASLTSFLGFLSAGERYERGLDADVPGTGRAVQVLT 796 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR----------------- 706 + + + + VV + ++ +P + + R Sbjct: 797 MHGSKGLEWDVVAVPNISRTAFPDVQPGDRWITTPEILPTPLRGDAAELPVFEVAADRAA 856 Query: 707 ----------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 ++R L A A+ L S R PS + EL ++ Sbjct: 857 FDRFAGECREQAEQEERRLAYVAFTRARWTLVASGHWWGPTQKMPRGPSPFLLELAEHAA 916 Query: 757 QSH-YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG------------------ 797 A P +P + Sbjct: 917 GDGNGRVDHWADTPLAKTNPSLETPPVFTWPAPLNPVEHAARRDAADAVRGLLASAPAAA 976 Query: 798 ---------------------------ERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE 830 E S + +Q +E Q L E Sbjct: 977 RTAAARAAGAPPAGGAGITAGDVDGASEEPSARDDRAGMTAQERALLAELDQETRLLLDE 1036 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE---GLSRYQINQQLLNA 887 + R A P +++ + P SR + Sbjct: 1037 QLTARAPARLVALPTGLTATQVMKLRADPDGLARELVRPMPRRPVPAASRGIRFHAWVEE 1096 Query: 888 LVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC 947 + E+ A D + LA A R +L Sbjct: 1097 VFERRPLLDHEDLPGAEDD----YLDDAELRALKDAF--LAGPYGARRPYAVEAPFELPL 1150 Query: 948 NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCAS 990 G + G + V G R+ ++ +Y + Sbjct: 1151 GGRVVRGRIDAVYDLGAGRYEVVDWKTGSTPADPVQLALYRLA 1193 >UniRef50_C5CB78 DNA/RNA helicase, superfamily I n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5CB78_MICLC Length = 1176 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 110/907 (12%), Positives = 211/907 (23%), Gaps = 161/907 (17%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-----------DGEQDVGNPLLAS 302 PA + R ++ + LF VG+P + Sbjct: 281 PAAGEQERARFPVVLLDEFQDTSHAQMRIFAGLFGPRGPEDDAPGLGHCVTAVGDPHQSI 340 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPD---------NLLHNIQSDILELENRAVAGV 353 +G G L + + L+ P + + IL + N A + Sbjct: 341 YGFRGASAGQLFAFPHAFPRLETGPGGAPRRVNADVSHLTIAWRNEESILAVANAVAAPL 400 Query: 354 NIEEFSRS-------DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 N + + + + + + E + RL A+ P T Sbjct: 401 NAHAAATGGAPVEVCTLRPRPGAGEGVVRVDRFVTAEEEAADVVARLGALTGAGPGGTTP 460 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 V+ + P + A LPY + + P + +++L + Sbjct: 461 SRAVLCRTRAQFGPVL-----DALDAAGLPYEVLGLSGLLALPEVAEVLAVLHVLADPTR 515 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWV---------NESGIRWGIDDDNVRELELP 517 S+ ++ L + R+ I L L++ +G R D + Sbjct: 516 SDQLVRL----LTGPRWRIGVADLEVLQERARFVSRLRAGRAAGGREDPAGDAPDVAPVR 571 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 + ++ +W G E + L ++ +L Sbjct: 572 DVSPEEDADAAALLEALDSLPGEGTDWVG----SRGRGFSPEGLARLRAVNAELRRLFTR 627 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ-YGDAVPLSL 636 E P + V R+ + +A A A L+ Sbjct: 628 TG-EDPADLIAEVIRETGLDVEVALRPGVSAAAARRH-LNAFQDAARDFGAGTTATDLTA 685 Query: 637 LRDELAQRLDQERI----SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 L+ E + G V + T + + + VV + G+ +G +P A Sbjct: 686 FLAWTESVLEHEDGLGVENAEPTPGLVQVLTAHASKGLEWDVVAVPGLQEGTFPSTRADR 745 Query: 693 ---------GFDLMSQKPKR--------------------------------------GD 705 + L + Sbjct: 746 WTSPGAGALPWPLRGDRASLPQWDGSWAQDQRDWVQSAGTKYSSKAAQEGNPDPYAVAVA 805 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE---LIDYIGQSHYLP 762 ++R L A A+ L++S + S ++E L + P Sbjct: 806 AHAEREERRLAYVAYTRARSALWLSTSLFKGVNKEPLPASAFLEEVAGLAGQVPGVALGP 865 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNY--QPGERQSYAREWLPAASQAGKAHSEF 820 + E+ L P D E W P ++ Sbjct: 866 APAEDDLPEANPAAGRTLVARWPFDPLDGPEAFVADPEDPEDEERWQPLPRRSRARREAV 925 Query: 821 VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL-------- 872 A V R V ++ +P+ L Sbjct: 926 EAAAAAVHAADPAALADDPELARQVDWVLLRRRDVAGTGGETALPEHVSVSLYGELAADP 985 Query: 873 ----------------EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 R L + AA A Sbjct: 986 QAVAEQLRRPLPRPPAHAARRGTAFHAWLEERFGATGMLDIDSAEDAADLWVDEALDLGP 1045 Query: 917 WETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQP---------DGLLRW 967 + + + R ++ G+ + G + + D W Sbjct: 1046 MQEWFR-----SSRWAERTPAFVEAPVETTVGGITLRGRVDAIYRSGGDPRLPFDPEADW 1100 Query: 968 RPSLLSVA----------QGMQLWLEHLVYCASGGNGESR-----LFLRKDGEWRFPPLA 1012 + +QL + L + G R +++ E FP L Sbjct: 1101 ELVDWKTGAVPRGRDLELKSLQLAVYRLAWSRLHGIPLERIGASFVYVAHGQERSFPDLP 1160 Query: 1013 AEQALHY 1019 E+ L Sbjct: 1161 GEEELER 1167 >UniRef50_Q6AJ72 Probable ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ72_DESPS Length = 733 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 66/611 (10%), Positives = 147/611 (24%), Gaps = 109/611 (17%) Query: 209 SRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAK--------L 260 + L L+ LG+H N Y + + L + + Sbjct: 170 EELIHDQYGHLADHCADILR-LGRH-YHTFKRDNVLMDYDDLLVNWKLLLQESPEVRSMM 227 Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLES 319 R R ++ + ++ L + VG+ + + G D+ Sbjct: 228 SHRFRYVMVDEYQDTNLIQADIIRLLASEHSNVMVVGDDSQSIYSFRGADFYN------- 280 Query: 320 SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSIT---F 376 + F P L ++ + + ++ + + L Sbjct: 281 ---IMRFPKEFPGAKLIKLEENYRSTQPILSLTNDLIANASEKYTKSLHSNIKGEQRPIV 337 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 + Q E + R+ + + + P +I V+ F + Sbjct: 338 YGARDEQAEATFILARVQQHIRD--GIDPSEIAVLFRS-----GFHSYKLEIGLGAAGIE 390 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 + ++ +S L L + + + Sbjct: 391 FEKRGGLKLTEAAHMKDVLSFLRLLVNPRDNLSWNRV----------------------- 427 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 L R+ A + + P+ Sbjct: 428 ----------------------------LLQLDRIGPKTAQKITTTIVPTFDPFLSLKNY 459 Query: 557 IA--ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 A V +A L R L E + L + + Sbjct: 460 PASKASVDIIAGLADLFRELRVTERTPAALYELVLNYYTPLFERLYS--DDYPKREKDLE 517 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 ++ +IA L D+ + + + T+ + + F Sbjct: 518 HFKGVIAGYDD--------LQKFIDDTTLDPPAPTADKTPDGKRMVLSTIHSSKGLEFDA 569 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V ++G+ +G +P G + +++R L A A++ LY++Y + Sbjct: 570 VFVMGLAEGRFPHANTV------------GFGPQWEEERRLLYVAATRARKHLYLTYPRQ 617 Query: 735 ---SIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 + S + EL D + + +L+ A + Sbjct: 618 MMTPDRQFKRVGMSPYLVELKDMLYERVEGSSTSSLSRPSRFAESNSPRPVGIPAGRRSR 677 Query: 792 QNYQPGERQSY 802 S Sbjct: 678 PAGLKRADLSL 688 >UniRef50_Q038V6 ATP-dependent helicase/deoxyribonuclease subunit B n=8 Tax=Lactobacillus RepID=ADDB_LACC3 Length = 1179 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 129/1111 (11%), Positives = 264/1111 (23%), Gaps = 187/1111 (16%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQ-------WLQMTLSQKF 54 L+ + M +V+ D LV + + L+ + Sbjct: 3 LQFILGDATTDHAGTMATMVQANLQADSQNQIFYLVPNHIKFEAEVDLLKRLRAQAASVN 62 Query: 55 GIAA--NIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLR 112 G+ A + + W + P+L + L+ Sbjct: 63 GVYAQNRVQVLSFSRLAWYFLKNTA------------------LYQQPRLDRASNTMLVA 104 Query: 113 HYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKAL 172 L + ++ ++ + Q + + T + A Sbjct: 105 KILGESKEELTIYAGEAHNTGFVTQLADQLSELVTGRITAEDLNTTVAAL---------- 154 Query: 173 VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGK 232 HRA L + + G A L LQ + + Sbjct: 155 -------TPGDRHRA--------KLRDLGIILDHYEAEI---GPYATNASLLSGLQQVMR 196 Query: 233 HIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE 292 + ++ F + D + T E + Sbjct: 197 NQDLSHTFIY--------LNDFNVFSASETGLVETMIETAAEVTVSLVLDKPYPAAPPVA 248 Query: 293 QDVGNPLLASWGKLGRDYIYLLSDLES---SQELDAFVDVTPDNLLHNIQSDILELENRA 349 ++ P GR Y L ++ LD F P + + L + Sbjct: 249 PNLFLPA-------GRLYHRLYQKAKTMKVPIRLDRFAKPRP------LSEGMKHLADWW 295 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 N++ + + V P E+ + ++ + + RD + Sbjct: 296 QTSTNLQPQ-----APAQTAQNKEVELAVATDPYHELRTVARQIYQAVRQ--GARYRDFL 348 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 ++ +D Y+ I A+F +P R + HP++ SL ++ D + +D Sbjct: 349 ILARRLDPYAAVIPAIFEE----FNIPQFTDLERPMKDHPLVVLIESLFAIQDHDYQYQD 404 Query: 470 VLALLDVPVLAARFDI---TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 V+ LL +L + L + +GI + Sbjct: 405 VMRLLHTELLLPENMDIAAFRDALDTTDNHLVRTGITGKKRWTQTDPWRYFQRNPNADDS 464 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 L A +A V + L W + L Sbjct: 465 QLDPEADKTAQINAIKTL--VADTVPQLLRQWQTAKTGREAAASLYQWLQTTGVIDQLNV 522 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 W A D A + ++ + R+ LA Sbjct: 523 WRQT------ANADGDLSRSQANEQAWDTFTQLLNDYATILGEADFNRDQFRELLAAGFA 576 Query: 647 QERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 +Q V I +R K V ++G + P G ++ Sbjct: 577 SATYTQIPSTLDSVVISETGLVRLAKAKHVYVIGATNTAMPDVPNDSGVLNSEERQLLAA 636 Query: 706 RSRRDD------------DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 + D D ++ ++A +KL +SY ++ Q+NSE S ++L Sbjct: 637 QLPDDRFLPEQGPTTTLGDPFINYLGFMAASEKLTLSYPMQNTQENSENQASPYFRQLAQ 696 Query: 754 YIGQSHYLPGDEAL----------NCDESEARVKAHLTCLHTRMPFDPQN------YQPG 797 + + L V+A H ++P + Sbjct: 697 ALQLTPATWAPAGLGTSLKAVLGSQRAMLSDFVRAAGEAQHQKLPLSRSWQGVLASLKQT 756 Query: 798 ERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE--TVPLETLQRFWAHPVRAFFQMRLQV 855 A++ + + V + L+ ++ + F + L + Sbjct: 757 TLAPLAQKLAGSLTYQNDPGRLDPTLAVQLYGRDMNVSVSRLETYYRNQFEYFLKYGLLL 816 Query: 856 NFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDL-------- 907 R E F L + +L+ + Q A D+ Sbjct: 817 QPRPE---------FELSPADTGSLFHAVLDQYLTQLRDAGQTLADVTAADVAAAVPPLV 867 Query: 908 ----------------PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLA----- 946 Q + + + E+ Sbjct: 868 AAITKRPGYEILGSTHRMAYLTSRLSRLLIQVLTNMRQQQRRTGFRPMRTELQFGRIGDT 927 Query: 947 ------------CNGVQITGWLPQVQPDGLLR---WRPSLLSVAQGMQLWLEHLVYCASG 991 V + G + ++ + Q + Y Sbjct: 928 RGLPGLSWPLPHGGRVNVRGKIDRLDVYRESDAQRFMVVDYKSTQHRFDDSD--AYYGIA 985 Query: 992 GNGESRLFLRKDGEWRFPPLAAEQALHYLSQ 1022 + + + P + A +L Sbjct: 986 LQMLTYVEAMANVPADPPFVPAGALYFHLQD 1016 >UniRef50_B1VAQ4 ATP-dependent DNA helicase n=1 Tax=Candidatus Phytoplasma australiense RepID=B1VAQ4_PHYAS Length = 713 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 63/541 (11%), Positives = 155/541 (28%), Gaps = 84/541 (15%) Query: 222 VYLQALQA--LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 Y + LQ L ++ L + Y P + + ++ + F Sbjct: 182 QYQKYLQKNNLVDFNDLILYTYQLLKEY------PEIKQFWQKKFQYILVDEFQDTDFYQ 235 Query: 280 SENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNI 338 + L + VG+P + G + F++ + ++ + Sbjct: 236 YQILTFLTEKNPCIFVVGDPDQNIYSFRGACFGNS----------QLFLNKF-NPQIYVL 284 Query: 339 QSDILELENRAVAGVNIEE----FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 + + EN + + + + H + E + + ++ Sbjct: 285 KQNYRSSENILEKANLLISYNKDHPFKKKLNSVKGKGTKVNAHFFVDSRIEAQYIVQKIK 344 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 +++ RD ++ + +PY + V++ F Sbjct: 345 HLVQIYH-YNYRDFAILYRVNS-----LGHFLEKYLISAGIPYMFLGNLSFYQKKVVKDF 398 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 ++ L L + + +++VP IT L + Q S D ++ Sbjct: 399 LAYLHLAVNPLQDFYLRRVINVP-KRQIGKITITCLEKIVQEKERSFFEILKDYKDIPVS 457 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 + + + + + + + D+ + ++ L Sbjct: 458 DKTQKQLYQFYCLIEELNNKIINNEFEKLSDIITYVDQKTQYSYQIS------LETQKNP 511 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 ++ ++ L + I Q Q + + Sbjct: 512 QKANEEQSSLVAI-------------------EELKSILNQIDE------SFQGSNLQKI 546 Query: 635 SLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 + +E++ + S V + T+ ++ + FKVV L G+ Sbjct: 547 NNFLEEVSLNNETKINNSSGNKANNRVKLATIHKVKGLEFKVVFLAGL------------ 594 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQE 750 +K D + R L A+ AQ+KL+++ + + + PSV +E Sbjct: 595 ------EKEFFDDLDDIQESRRLTYVAVTRAQEKLFLTGVSQRMLFGKNFSHEPSVFFKE 648 Query: 751 L 751 + Sbjct: 649 M 649 >UniRef50_UPI0001BC375D ATP-dependent DNA helicase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC375D Length = 648 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 57/517 (11%), Positives = 152/517 (29%), Gaps = 102/517 (19%) Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLAS 302 CR + ++ L K R + ++ + + L + VG+ + Sbjct: 221 CRELF--LQRKDILLKWQQRYKYILIDEFQDINKVQYDVIRMLAEPERNIFIVGDDDQSI 278 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAG---VNIEEFS 359 +G G + + F P+ + + N A + + Sbjct: 279 YGFRG----------SRPEIMLNFEKDYPEAEKIILDINYRSTSNIVDASGYVIRNNKVR 328 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 N + + ++ E + + + + ++ D V+ + + Sbjct: 329 FDKNIHTDNEKGDKVDIIETNNINEEYDRIVKIIRSFVDAGK--QYADFAVLFRTNVTAA 386 Query: 420 PFIQAVFGSAPADRYLPYAISDRRA-RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 P + + +P+ + D H + + ++ ++L + D Sbjct: 387 PLV-----RKFMENNIPFVLRDGIPNIFEHWIAKDILTYMTLAEGGRKRADF-------- 433 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 +R + + + G + D + + + W R + Sbjct: 434 -----------IRIMNKPLRYIGRDYVTDSEVSFDELEKYYEEKPWMINRIRKMERELNA 482 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 + + +N R+G+ D + + Sbjct: 483 MSD-----------------------MTCYAMINYLRKGVG-----------YDDYVKEY 508 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS--QRFLA 656 + ++ I + D + R+ + + ++ + + +R L Sbjct: 509 AKNHSIEPQELSDILDEIME--------SSKDFIKFDDWREYIEKYTEELKENHTKRDLK 560 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 V + T+ + + + V ++ N+G+ P + K + +++R +F Sbjct: 561 DYVTMTTMHSSKGLEYDTVFIIDANEGITPHK-------------KAVLDADIEEERRMF 607 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 A+ A++KLYI + N S V E+++ Sbjct: 608 YVAMTRAKKKLYIFCPK--ERYNKSLETSRFVNEIMN 642 >UniRef50_C0XV87 ATP-dependent DNA helicase n=10 Tax=cellular organisms RepID=C0XV87_9CORY Length = 1096 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 95/860 (11%), Positives = 210/860 (24%), Gaps = 85/860 (9%) Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 ++ L A + + A R R ++ + Sbjct: 239 VEELNAQLRERGLVTFNEQMSVAARLAHDHEFVGASQRQRYRVVMLDEYQDTSHAQRVLL 298 Query: 284 GQLF-----------NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPD 332 LF + VG+P+ A +G G L+ Sbjct: 299 RSLFGQGRNADQPRRHPLTVTAVGDPMQAIYGWRGATAAN-LAAFVEDFPEPTGAPAPTK 357 Query: 333 NLLHNIQS--DILELENRAVAGVNIEEFSR--SDNKRPLDPLDSSITFHVCHSPQREVEV 388 L + ++ ++L L NR + R + + E++ Sbjct: 358 QLTTSWRNPAEVLALANRVSDSLLGTGSDRVVAALDPRPGAGAGEVELGFFEHEDEEIDF 417 Query: 389 LHDRLLAMLEEDPTL-TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 + D L A + P V+V + A +R +P+ I Sbjct: 418 VADNLAAQYDAARAAGEPFSAAVLVRKNKT-----SPEVAEALEERGVPFEIVGLAGLLD 472 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID 507 P + I++ S+ S L +L P + L L + Sbjct: 473 VPEVADTIAIASMLVRPGDSAAALRILAGPAVGL----GLADLDALSRRAANLRGAAPAA 528 Query: 508 DDNVRELELPATGQHTWRFGLTRMLLGYAMES-AQGEWQSVLPYDESSGLIAELVGHLAS 566 + + + A G +V E+ + + + + Sbjct: 529 PKPDEAADPTTHFEAQLEESVAEAQRITAGADTPAGLTDAVADLGETERYTPDGLRRIKA 588 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 + +L R +R + + + + + ++ E Sbjct: 589 VASKLRWLRTHALGKRLPDVFADIISVFGIRTEVLARPSSTGTVH----LDRLLEEVSSY 644 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRF-LAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 L + + V I T + + + V ++ + Y Sbjct: 645 PGTSLTALLDYFELTREHEGGLAPGNVPVRTDRVQILTAHKAKGLEWDTVAVIRADAETY 704 Query: 686 ----------PRQLAPLGFDLMSQKPKRGD------------RSRRDDD-RYLFLEALIS 722 P+ + FD + R + R++ ++ LF A+ Sbjct: 705 KARTATFLTQPQLVPDEDFDAFADAENRTEFAKAAKAYVAAVRTKLAEESARLFYVAVTR 764 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ-----SHYLPGDEALNCDESEARVK 777 + +KL ++ P + D + + + + ++ Sbjct: 765 SARKLIVTGSAVKPGRKKVAEPYEHFAAIRDLVPETSVVHWYDGSSADVDEQEDDHDNAV 824 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETL 837 T L + +P + + E + ARE LP G+ + + + + E + + Sbjct: 825 PQRTGLWPHLQVEPGDAETAELVARARESLPE-YIDGELYGLWERDTSALIEEHLAAASG 883 Query: 838 QRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG---LSRYQINQQLLNALVEQDDA 894 + P + ++ +E P + R + L Sbjct: 884 EVPVMMPGELTASDVVALSADSEQFARRARRPVPFKPNTYAKRGTAFHEWLEEFYGARPL 943 Query: 895 ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITG 954 + E ++ +LA + G Sbjct: 944 LTEDE----LPGVDEPEVETRTLEKLKNNFER--SHWARRTPAFVEHPFELALGESVVRG 997 Query: 955 WLPQVQPDGLLRWRPSLLSVAQ-----GMQLWLEHLVYCASGGNGESR---------LFL 1000 + V D W M+ + L + ++ Sbjct: 998 RMDAVFMDDNG-WTVVDWKTGTKPAPAQMKSAMLQLAVYREAWRRIAGDGLDVRAVFFYV 1056 Query: 1001 RKDGEWRFPPLAAEQALHYL 1020 R ++ L L L Sbjct: 1057 RTGEDFVPSDLPGSDELEQL 1076 >UniRef50_B0PD61 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PD61_9FIRM Length = 1106 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 100/669 (14%), Positives = 195/669 (29%), Gaps = 68/669 (10%) Query: 351 AGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV 410 A I + + P D + C E+E + + A++ + RDI + Sbjct: 275 ALAWIAQAYPQETPAPYDGAPDGVQIAACEDVYDEIEYIAGEICALV-REKGYRYRDIAL 333 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 + ++ Y ++ VF +PY R Q HP++ L RF SE V Sbjct: 334 IGRALEPYLVPLETVFARYD----IPYFADRRVDIQVHPLVNGIFCALDAVRGRFDSEAV 389 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 LAL + L + G+ + G + Sbjct: 390 LALAKTCISGIDAV----EAGLLENYCFTWGVSGTVWAAPFVNHPDGMEGAFSDEQRERL 445 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 + A + G + + + + + L ++ Sbjct: 446 SRINAARAALIGPLERLADSL--------RGCDGRGFARAIYSYLEQVDAACRLRDYAEG 497 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 + FL + + ++ GA G ++PL+ L D L + I Sbjct: 498 MEEGDARRFLDLSAQ------VWDAVIGLLDVFGGALAGISLPLARLTDLLRLGVSTVDI 551 Query: 651 SQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR------ 703 V T +R + V ++G+N+GV+P +P G +++ + Sbjct: 552 GSLPQTIDQVIAGTADRIRPNAPRAVFVIGLNEGVFPLWSSPSGIFSAAERERLRTQGVD 611 Query: 704 ---GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 +RY AL A + L+++Y R + R S V E+ +G Sbjct: 612 LLRTPEQTALFERYYVYFALTQASEALWLTYPLRDAA-GAARTASSAVDEVRALVGAPAR 670 Query: 761 LPGDEALNC----DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 AL + + H + + A +A Sbjct: 671 GSAGGALARAAGERSAFDAMMRHWRDDTPETAVLRSYFTEQDPARIRTLEALGAPRAFSL 730 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILEGL 875 F + + ++ P F ++ L++ R P ++ I L Sbjct: 731 EGRGAARALFGTRMRISPSRAELYYECPFSYFCRVGLRLRPRRRAEFNPIESGSLIHLVL 790 Query: 876 S--------RY--QINQQLLNALVEQDDAERLFRRFRAAGDLP--YGAFGEIFWETQCQE 923 R Q+N +LL + + L R ++P + T + Sbjct: 791 EKIVKKYGGRGLAQLNGELLRSEITAIIDADLKARIANYDEMPARFKYLFRRLVGTIQRL 850 Query: 924 MQQLADRVIACRQPGQSMEIDLACN--------------GVQITG---WLPQVQPDGLLR 966 +++LA + E+ + + V + G + ++ DG Sbjct: 851 IERLALEFGQSAFEPAAFELPIGLDAPVQPLDLRAPDGTRVIVEGIVDRVDVLEQDGKKY 910 Query: 967 WRPSLLSVA 975 R Sbjct: 911 VRVVDYKSG 919 Score = 51.5 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 32/255 (12%), Positives = 69/255 (27%), Gaps = 30/255 (11%) Query: 1 MLRVYHS----NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG- 55 ML + + +L + V ++LV + + L ++ G Sbjct: 1 MLHLIFGMAGAGKTTLLHERIADCVSGG------GRAILLVPEQYSFES-EKALYRRLGA 53 Query: 56 -IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHY 114 A ++ +F + + + L E L+ Y Sbjct: 54 RGALQVEVLSFTRLCDRIFREYGGLAGVHLEEAAKYLLMSV-----ALGEVGGA--LKIY 106 Query: 115 LTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 + ++ + + ++L + P+ L G+ + A + Sbjct: 107 GKNAANAAFAASMCEQISEL--KTAGASPEALRGAAQDLG-GAFGDKLSDIALI---FDA 160 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 Y + + + R + LE VFI G A + L+ + Sbjct: 161 YQAVIERGYSDPDDCLARACKRLEGRNFFA---GYDVFIDGFMAFMGAEWKLLKFVLTDS 217 Query: 235 EIHLLFTNPCRYYWG 249 H+ C W Sbjct: 218 P-HVWAALTCMGLWQ 231 >UniRef50_B0RZ36 ATP-dependent DNA helicase n=21 Tax=Bacteria RepID=B0RZ36_XANCB Length = 658 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 61/532 (11%), Positives = 136/532 (25%), Gaps = 84/532 (15%) Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLE 318 R ++ + L VG+ + + G + L Sbjct: 202 WRERIGYLLVDECQDTNDAQYRLLKMLAGPRGNFTCVGDDDQSIYAWRGANPENLQQMG- 260 Query: 319 SSQELDAFVDVTPDNLLHNIQSDIL---ELENRAVAGVNIEEFSRSDNKRPLDPLDSSIT 375 P + ++ + + A A + I Sbjct: 261 ---------RDYPALEIIKLEQNYRCSNRVLRAANALIAHNPHEHLKTLWSDQADGERIR 311 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 C + E E + + + L + D ++ F A + Sbjct: 312 VWECRDSEHEAEKVAAEI-SFLGTAKQVPWSDFCILFR-----GNFQSRPLEKALQLLRV 365 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY ++ A ++ +S L L + L + P + ++ L L + Sbjct: 366 PYHLTGGTAFLERQEVKDVLSWLRLIVNPEDDAAFLRAVQSP----KREVGATSLARLAE 421 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + + +S+ Sbjct: 422 LASAKSVPMSRAA------------------------------------ESMGALQHLPP 445 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 A + +L + L + + L ++ EA ++ Sbjct: 446 RAANGLSAFTDILRDMREHSATLPAGELVRTLAD--KSGLLNDLRNQSKDEAGFQRRKRN 503 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 + S L +LA ++ V + T+ + + F+ V Sbjct: 504 LDELAEWFE--GGPRGASASDLAAQLALLSRNDKDD---GGNQVRMMTMHASKGLEFRYV 558 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 ++G DGV P +++ + ++R L + A+Q+L++SY + Sbjct: 559 FIVGCEDGVLPHEVS-------------LEEGNLQEERRLLYVGITRAKQQLWMSYSKLT 605 Query: 736 IQDNS--ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 + PS E+ + D + + + R A L + Sbjct: 606 RKFGEHVRLKPSRFFDEIP--AAELQRDGADPVADAERKKERANAGLAAIQA 655 >UniRef50_A6TQ92 UvrD/REP helicase n=2 Tax=Alkaliphilus RepID=A6TQ92_ALKMQ Length = 678 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 64/543 (11%), Positives = 146/543 (26%), Gaps = 95/543 (17%) Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGK 305 Y P L + + + ++ + E + VG+ + + Sbjct: 196 YDLLRARPGVLEHVRNQYQYILIDEFQDINGVQFETIKLMAEPLQNLFVVGDDDQSIYSF 255 Query: 306 LGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSD 362 G + +L+ F D+ P + + EN A + + Sbjct: 256 RGANPQIILN----------FHDIYPKAQKITLNMNYRSQENIIKSANQLIKQNKCRVEK 305 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 P +S I + + + E + + ++ + +DI ++ + Sbjct: 306 QIIPTVKANSEIQYSEPKNREEENRTICQFIELLMS--EGYSYKDIAIIYRTN-----LL 358 Query: 423 QAVFGSAPADRYLPYAISD-RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 + DR +P+ D H + + I+ L + Sbjct: 359 AGSLVDSLLDRNIPFVSRDHIYNVFEHWIAKDIIAYLKGAFN------------------ 400 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 + L + TR + AM AQ Sbjct: 401 --YYDYDSLMRIIN-------------------------------RPTRYITKNAMRKAQ 427 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 + + + G + + L+ + E + +D+ + Sbjct: 428 TYHKDFITALKVKGELMPYQNKN---IADLSYHLNNIKYLTTKEAIKYIRKDIGYDRHIE 484 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS--QRFLAGPV 659 + E + + + E A + + R V Sbjct: 485 NYCAEKRIRC--EGLIETLNELEEASSRHEK-IDGFLTHIKDMKSSLSQKSFHRTEEEQV 541 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 + T+ + + +KVV +LG +GV P + +++R LF A Sbjct: 542 ELLTMHSAKGLEYKVVIILGAIEGVIPHHKSMDTL------------EDIEEERRLFYVA 589 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 + A+++LYIS + PS + E+ + + + + Sbjct: 590 MTRAKERLYISSSLIRYE--KPTEPSRFINEIRQNDNKKGSFVIGQEVEHKTFGKGLIEQ 647 Query: 780 LTC 782 ++ Sbjct: 648 ISE 650 >UniRef50_D1ACM7 UvrD/REP helicase n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1ACM7_THECD Length = 1128 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 91/841 (10%), Positives = 189/841 (22%), Gaps = 119/841 (14%) Query: 261 LTRQRRHSFEDRELPLFRDS-ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLES 319 +R ++ + VG+P + +G G L E Sbjct: 264 RSRYAVVLLDEYQDTSHAQLVLLTSLFGGGHPVTAVGDPCQSIYGWRGAGSGNLTGFPED 323 Query: 320 S----------------------QELDAFVDVTPDNLLHNIQSDILELENRAVAGVN-IE 356 ++ ILE+ R G+ Sbjct: 324 FPLAPAVPSRVAAVPPPRPGRRPPRHARPAPTATLSISWRNGERILEVAARIQQGLRADT 383 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP------------TLT 404 + + + E E + +R+ + DP L Sbjct: 384 ANVPRLRPGEGRRGRGRVECALLPTVTAEAEHIAERIRRLRAADPELAPDGLPWDEGPLK 443 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 I V+V P A +R +P + + P ++ ++ L + Sbjct: 444 YSHIAVLVRRRSQIPP-----LRKALEERDIPVEVVGLGGLLTVPEVQDVVATLRVVHDP 498 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV--RELELPATGQH 522 + L + R+ I L L + D P + Sbjct: 499 TAGASLARL----LTGPRWRIGPRDLVALGRRARRLASENTRDITPPPDASELRPEPAAN 554 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG--LAQ 580 R ++ + ++ + S E + L L +L R L Sbjct: 555 AEETDPLRQVVIELTQETGSLVDALDDLGDPSAYSPEGLARLRRLAAELRTLRSQVGLPL 614 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 + E + + A ++ + + ++ Sbjct: 615 PDLVAEVERTLGLDIEVAARSGLDPAGARADLDAFIETAASFAEESENPTLGAFLAYLKA 674 Query: 641 LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM-------------------- 680 + + V + T+ + + + VV + G+ Sbjct: 675 AESEEFGLPAGRVSESDSVKLLTVHAAKGLEWPVVVVPGLCYLPSGSGRPVKGSIFPSPP 734 Query: 681 ---------------------NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 G PR DL K + DR ++R L A Sbjct: 735 QQSTRWTDNPRLLPFELRGDYEKGNLPRLNGLTKADLDRFKDECADRD-LREERRLAYVA 793 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG-------QSHYLPGDEALNCDES 772 + A L + PS ++E+ P + A N ++ Sbjct: 794 VTRASHLLIATGHRWGATA-RPLHPSPFLEEIRQACETGAGRVVSWADPPEEGAANPLQA 852 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV 832 EA R R + P A G ++ + + + Sbjct: 853 EAEPGRWPATPEGRRYAAIVEGAEMVRDAMVGRIAPWAGDDGLTEADRRRMTAWARDVEL 912 Query: 833 PLETLQR-------FWAHPVRAFFQMRLQVNFRTEDSE---IPDTEPFILEGLSRYQINQ 882 L R P + + ++ ++ R Sbjct: 913 LLAERDRGRGGDVLQVELPAKLTVSTLVALSRDPQEVARSIRRPMPRPPAPYARRGTAFH 972 Query: 883 QLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME 942 + L + Q +RL G GA + + ++ + R + Sbjct: 973 RWLESRWGQ---QRLLDPDELPGAADEGAADDSMLTELQRRFEE--SEWASRRPLDIEVT 1027 Query: 943 IDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLE-----HLVYCASGGNGESR 997 + + G + V + + L + Sbjct: 1028 FETVLGDRVLRGRMDAVFTAPDGGYEVVDWKTGRPPADEDFRHAAVQLAAYRLAWADLAG 1087 Query: 998 L 998 + Sbjct: 1088 V 1088 >UniRef50_A8L2I8 UvrD/REP helicase n=6 Tax=Actinomycetales RepID=A8L2I8_FRASN Length = 1135 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 121/942 (12%), Positives = 233/942 (24%), Gaps = 106/942 (11%) Query: 153 HLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPS--- 209 L + L + + A + + PP L Sbjct: 108 EQDARLRDLIEGSRELGRPVWPDPLAGCLNTRGFAEEIRMLLTRAREIGVDPPALARIAR 167 Query: 210 RVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSF 269 RV +A+ Y L ALG E L + + +P LA+L R R Sbjct: 168 RVGRSDWAAVAEFYSDYLDALG--AEGALDYADLVHAAANLAAEPDVLAQLRQRYRAVFV 225 Query: 270 EDRELPLFRDSENAGQLFNSDGEQDV-GNPLLASWGKLGRDYIYLLSDLESSQELDAFVD 328 ++ + + G+ V G+P + + G + LL D Sbjct: 226 DEYQDTDPAQERLLTAVAGGGGDLVVFGDPDQSIYAFRGAEVRGLLDFPNRFPRADG--S 283 Query: 329 VTPDNLLHN--------IQSDILELENRAVAGVNIEEFSRSDNKRPLDP-LDSSITFHVC 379 P L + + + AG+ + + + Sbjct: 284 PAPVAALRRCRRMAPAPLAASRRVAASLPSAGLPVRHVRAHRDLVSAGAVGPGQVAARTY 343 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 + LL + + D+ V+V + +P ++ Sbjct: 344 PTAGA-EAAAIAELLRREHLENGVDWDDMAVLVRSTAPLG-----LLRRVLTAAGVPVSV 397 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 + + A + + + + GLR L + + Sbjct: 398 AGGELPPAREPAAALLLTALRCADDPAVQLTPETARALLTSPLGGADPAGLRALGRELRA 457 Query: 500 SGIRWGI-----------------DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 D + A + +LG SA+ Sbjct: 458 HDAAARAAARAAARGTAARGTTARDSTARDAVGPIALPEPRSAPEADGSVLGLPASSAEL 517 Query: 543 EWQSVL-PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR---DMLNAF 598 ++V P + EL + L L R L + E+ L + Sbjct: 518 LREAVADPERVLLAVPDELAAPVRRLGRLLRTVRAELRRGAAPEDALWTLWTASEWGPRL 577 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL-----RDEL--AQRLDQERIS 651 A A ++ A++A +EL Q + + Sbjct: 578 ERASAVGGPAGRSADRDLDAVVALFDAVGRLGERRGPGFGVSSVVEELTRQQIAPETAQA 637 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ---------KPK 702 + V + T + + ++VV + G+ DGV+P Q +P Sbjct: 638 RAGRPATVRLLTAHRSKGLEWEVVVVCGVQDGVWPDLRQRHTLLGAEQLDSPRNGGVRPP 697 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 R D+R LF AL A+++L ++ + + D PS + EL + Sbjct: 698 RTREELLADERRLFYVALTRARRRLVVTAVDGADDDGE--QPSRFLAELG--VQVESVRA 753 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQ 822 LT + A + AH + Sbjct: 754 RPPRPLTLVGLVAALRRLTVDPEASAAMREAAGVRLAALAAASDETGRALVPAAHPDRWW 813 Query: 823 PLPFTLPETVPLETLQRFWA-----------HPVRAFFQMRLQVNFRTEDSEIPDTEPFI 871 L VP+ +R F + Sbjct: 814 GLLDVTSSDVPVVAPDAPIRLSGSSLSGLSSCGLRWFLEHEANAAEPASP---------- 863 Query: 872 LEGLSRYQINQQLLNALVEQ------DDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 ++ L + + + + + E + + Sbjct: 864 --AQGFGKVVHALADEVTTGRTEARLEALDARLDLVWRHLEFDSRWRSEQERAAAREALG 921 Query: 926 QLADRVIACRQPGQ-------SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGM 978 + + A R S +I++A V++ G++ +V+ D R + Sbjct: 922 RFLEWHAAQRGREVVASEVRFSCDIEVAGRVVRLRGFIDRVELDDAGRVHVVDFKTGRTP 981 Query: 979 QL------WLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAE 1014 + Y + G L + PP E Sbjct: 982 PSRRDLATHAQLGSYQLAVREGALDPVLDEAARRHDPPAPGE 1023 >UniRef50_Q3KL55 Exodeoxyribonuclease V gamma chain n=11 Tax=Chlamydia RepID=Q3KL55_CHLTA Length = 1006 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 166/1104 (15%), Positives = 312/1104 (28%), Gaps = 179/1104 (16%) Query: 6 HSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTL--SQKFGIAANID-F 62 SN +VL A + + P ILV S+ WL+ L + I F Sbjct: 11 FSNYPEVLLAKLAQDLFSI-NQTPMTKRWILVPSSDTDHWLRRELVKASSNHIFMGTHIF 69 Query: 63 PLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKR 122 +F+ +F + S + ++ + LL + + +L S Sbjct: 70 ASFDAFVKYLF--TGTRLVDLSTPDHITLPLTIYNLLKESSFNSSSEVSYSHLQKLSSIF 127 Query: 123 KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQP 182 K F F Q + P +K L P Sbjct: 128 KKF-------YTFSQ-----------------------EPSTNNPYYKNLFAQLKDSYTP 157 Query: 183 RWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTN 242 S P P + I G LP ALGK+ +H + Sbjct: 158 LETIF----------SSILDHPLEYPCSLHIFGYPQLPQHVASFFVALGKYFPVHFYCFS 207 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS 302 P Y+GD+ +A L R + + + +L LLA+ Sbjct: 208 PSAAYFGDLLSDKAMAALSPR-----IPEPQQETWEKYVLTDRLA-----------LLAN 251 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 + D E + F + LH ++ L+ Sbjct: 252 LAHKSQSLQNFFLDCSVPYE-ELFQPYEKLSSLHIVKDSFFHLQPI-------------- 296 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 +++ +I S REV L + +L + ++I ++ +++ Y + Sbjct: 297 DQKLFSNSPQTIFVRQAPSASREVHQLFSLVSQLLHS--GVPAQEIFILSSNLSKYETLL 354 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 + +F +LP ++ Q+ + + +++ S+ D+L +L P L + Sbjct: 355 RGIFE-----PHLPLYLTKTEKTQTRTLKNKLLLVVTFLFSKGSLNDLLRILSHPDLLSP 409 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 E+ + + + + R+L Y G Sbjct: 410 ---------------LETTKMGFLTHKLTHYWKSLSQKDSPLTQLIHRILDEYPFIDDTG 454 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 ++ L+ L AS + ++++ EE + L F Sbjct: 455 SVNEAETWEVVVPLLHTLQQVTASYIE---------SKDKTYEEHSRLIFSTLENIFFLS 505 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNIC 662 E A + + + Q + L + F I Sbjct: 506 TEEHALLVSLSKTLQPFVRSSCSLTIFIEFCL-DFLSHIPGHSQLYNQPGPF------IG 558 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 +L + IP +LG N + D + S D+D FL+ ++S Sbjct: 559 SLNSLSLIPKGYTFILGANKKDH-SLDTSFLIDPSLIQEDFLFSSTEDEDNLHFLQTIVS 617 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG-QSHYLPGDEALNCDESEARVKAHLT 781 + +L+ISY+ S PS ++ L+D + Q +L G + S + Sbjct: 618 TKHQLHISYLSSSKN---PALPSSALKHLLDAVPIQEEHLSGKLYAKKNFSSEPLHQSYQ 674 Query: 782 CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFW 841 + P KA S F TLP + L+ L + + Sbjct: 675 VYYRMAQVSPL--------------------QNKAPSLFKSDTTKTLPSHLSLQHLIKAF 714 Query: 842 AHPVRAFF--QMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL-----------LNAL 888 P+ F Q + + S+ P + + + L L+A Sbjct: 715 KDPLNFFLSTQHGFSFHPKALFSKSEKVFPSPHDAKAFWN--HLLSSKTPLPTTNYLSAF 772 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN 948 E + + L F ++ D + Q + + L Sbjct: 773 TESLYTDVQDSVSKRLETLQKDPATTPFSVVFSDQL--FHDPLHPNDQQVSPLLLSLPLK 830 Query: 949 GVQITGWLP-------QVQPDGLLRWRPSLLSVA----------QGMQLWLEHLVYCASG 991 + + G + + ++ +L + AS Sbjct: 831 NIHLQGTIHGVCSKGVYLFSMHPGEAFKKTQKTHGFPKDAFELESYLESYLSLALLQASH 890 Query: 992 GNGESRLFLR---KDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKT 1048 + LR D E PP ++ + YL + I Y + + + ++K Sbjct: 891 LLPKEATILRVTPHDIEPILPPFSSPE--SYLIRAIHLYELLQNQAIPLPSAQAWEYIKK 948 Query: 1049 CYDAQNDAMLDDDSTLQKARTKFL 1072 A DS + F Sbjct: 949 TDSASQCIKKLLDSEEDPLTSSFW 972 >UniRef50_C8P127 ATP-dependent DNA helicase PcrA n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P127_ERYRH Length = 715 Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 56/527 (10%), Positives = 150/527 (28%), Gaps = 89/527 (16%) Query: 256 YLAKLLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASWGKLGRDYIYLL 314 K R ++ + L + + VG+P + G + +++ Sbjct: 204 VRDKWRRRFDVVLVDEFQDVDHVQYGIVDALVGDENQLYVVGDPDQTIYTWRGANVDFII 263 Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS- 373 F P++ + + ++ + + + ++ + L S Sbjct: 264 D----------FDKKYPESETITLNQNYRSTQHILDSANTLIKNNKDRPDKALYANKESE 313 Query: 374 --ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 + + E + +R+L + D + D+ V+ ++ Sbjct: 314 FPVQYATLDDGDAEAYWVANRMLELH--DEGHSYLDMAVLYRSN-----YLSRALEKVLM 366 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 R +PY I ++ +S L + ++ R I E+ L Sbjct: 367 ARRIPYVIYGGLRFYDQAEIKDMMSYLRMITHGDDLALRRSIAM-----PRRGIGEKTLD 421 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 + E + + Sbjct: 422 TIMLQAREREMT-------------------------------------------MYESM 438 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + + + +M + +R +AQE +E + + + E + Sbjct: 439 LYDVHHQQATPKIRNYVMMIEDFRE-MAQEASIETIMQYV--LKRSGLREHFEKIQELER 495 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 +E + I + + L ++ D+ + + V + T+ + + Sbjct: 496 VESLKELIGDALTFQENYENPSLDEYIQMVSLYGDKSEVVEGE---YVRLMTVHAAKGLE 552 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS- 730 F+ V ++G+ D ++P + + + ++R L A+ A+++L++S Sbjct: 553 FENVFIMGLADNIFPNKNSI-----------QEGSGGIQEERRLMYVAITRAKERLFLSN 601 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 IG + S ++E+ ++ + Sbjct: 602 NIGYNFVAGGYARASRFIKEM--HLDEKTSEMEATPTISRSEVQDAI 646 >UniRef50_C8WI10 UvrD/REP helicase n=3 Tax=Bacteria RepID=C8WI10_EGGLE Length = 753 Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 78/585 (13%), Positives = 158/585 (27%), Gaps = 88/585 (15%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDY 310 ++P K R ++ + E L VG+P + G D Sbjct: 244 QNPDIRLKWQKRLEYIMVDEFQDIDGLQHELMEVLAGYHKNLFVVGDPDQTIYTWRGADV 303 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV-AGVNIEEFSRSDNKRPL-- 367 YLL F P + + A IE+ KR Sbjct: 304 RYLLD----------FDKRFPGTRTVMMLENYRSAPRVVAVANSLIEKNRERVPKRLAAM 353 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + + SP E + LA+ + RD+ V+ + + Sbjct: 354 RSVHGPTVWRHAKSPDGEAAWIAQGALALH--GEGVAYRDMAVLYR-----AHYASRPVE 406 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A +P+A+ ++ +S L L + D + + P + ++ Sbjct: 407 EALLRAEVPHAVYSGVPFFGRREIKDALSYLRLVAYQ-DDLDFARVANAP----KRNLGA 461 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + +LR+ +E G + L R + + Sbjct: 462 RRMAFLREKADELGC--------------------SLFEALERFVDDDLFK--------- 492 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 LL ++ +R E V + L ++ Sbjct: 493 -------------RTKARQLLQLVDRFRSSYEGRPVSEVLAAVLSESGYERALRTEGSQE 539 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + + + Q++ G+ V L L + V + T+ Sbjct: 540 RLDNLAELKQSVYEF--ETTCGEEVTLEHYLAH--TALLTNADAMDDAQDKVRLMTVHAA 595 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F V L M +GV P + +++R L A+ A+ L Sbjct: 596 KGLEFAHVFLCSMTEGVLPSRKTDTP-------------QGMEEERRLAFVAMTRARDGL 642 Query: 728 YISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 Y++ + + R+PS + ++ + P + L+ + + Sbjct: 643 YLTEAEGRGHEGAPRYPSRFLLDIDPAALEFSNKPAERELDDARAAYALADRWIADL--- 699 Query: 788 PFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV 832 D + A + + + V P T+ Sbjct: 700 VRDARFAVGDRVTHAAFGSGRVLAVDSQKRAYEVAFDDLDTPRTI 744 >UniRef50_A5EW07 DNA helicase UvrD n=2 Tax=Dichelobacter nodosus RepID=A5EW07_DICNV Length = 664 Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 69/607 (11%), Positives = 151/607 (24%), Gaps = 86/607 (14%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 Q L + L Q+ I ++A P S + +A Sbjct: 110 DQHDSLTLLRELCHNDDDA------FLRRMQQHISAFKNANVLPEETASLMIDDETAAQA 163 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 A + D A + R ++ + Sbjct: 164 AKIYCAYCERLQAYNAVDFDDLLLLPTRLLKTDAAVRGFWQEKIRYLFVDEYQDTNNCQY 223 Query: 281 ENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQ 339 + + VG+ + + G L + P + ++ Sbjct: 224 ALMQLIVGAGGALTAVGDDDQSIYAWRGAQVKNL----------QYLQEDYPQLHIIKLE 273 Query: 340 SDIL---ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 + ++ A + + + + E E + + Sbjct: 274 QNYRCHHKILQAANTLIAHNPHLVEKRLWSQLERGDGVCVFAARNDEAEAERIASAIYQQ 333 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 ++ V+ F A D +PY IS + H + ++ Sbjct: 334 KLRTQ-AAWQNFAVLYRSN-----FQARAIEQALRDVSIPYQISGGTSFYEHSEIRDLLA 387 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 L L ++ L + +VP + +I + L Sbjct: 388 YLRLINNPEDDAAFLRICNVP----KREIGTKTLT------------------------- 418 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 +L YA + + + ++ L A + + ++ Sbjct: 419 --------------VLGEYAAKRQCCLFYAATELGLATLLSARAAMSVQQFCQWIEEKQK 464 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP-LS 635 P V ++ ++ E A + + +IA + + + L+ Sbjct: 465 EAETALPSALLQTVIDEVAYREYIEANEAPAKAEKRWARVEELIAWLVRLEEEERYQSLA 524 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 L + L Q V + TL + + F V + G+ + + P Sbjct: 525 GLMRHV--LLLDILEHQDKQKDGVQLMTLHAAKGLEFPYVYIAGVEEDLLPHHHCGES-- 580 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERFPSVLVQELID 753 ++R L + A+ +L +SY + S +QEL + Sbjct: 581 ----------EEAIAEERRLLYVGMTRAKFQLTLSYAKQRRHGKNWEASTASRFLQELPE 630 Query: 754 YIGQSHY 760 Sbjct: 631 EGIDWQD 637 >UniRef50_B2S4R5 DNA helicase II n=3 Tax=Treponema RepID=B2S4R5_TREPS Length = 670 Score = 189 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 62/517 (11%), Positives = 140/517 (27%), Gaps = 66/517 (12%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIY 312 +L R + ++ + L + VG+ + + G + Sbjct: 209 QDVAEQLHARWQVVMVDEYQDSNVAQFHFLQVLTGAHTYLCVVGDDDQSIYRFRGAEVKN 268 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDP 369 +L F + + + ++ + + ++ + Sbjct: 269 IL----------TFPEFFQNTQIIRLEYNYRSTDAILRVADSVVKKNQDRLGKALIAQRT 318 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + + ++ E + + + D ++ F Sbjct: 319 GGTKPRLFLLNNQDEEAALCVHLIQE--ARARGIPYADWAILYRVNAQSLS-----FEQC 371 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY I S ++ ++ L L + + +L+ P I E+ Sbjct: 372 FLRNRIPYRIVGTLKFYSRAEVKDVLAFLQLIVNGSDELALRRVLNKPP----RGIGEKT 427 Query: 490 LRYLRQWVNESGIR--WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L ++ I + ++ L A + + L R L ++ ++ Sbjct: 428 QDALFVCAQQAAITDFTTLQSTHLTALGTRARQKVSSFLSLLRALRARMPQAPAAGEEAR 487 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + L + + + LEEW + E Sbjct: 488 TSAPPEEPVEERTHDA-----EGLARFVSVVMEHTGLEEWYR-------------QKDEE 529 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 T Q ++ L + + LDQ + A V++ T+ Sbjct: 530 EGTQCAVNVQELMNAASLYACSHE-GLVSFLEHIQ--LDQNMADEGGAADAVHLITIHNT 586 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F+ V L G+ +GV+PR D + ++R L A A L Sbjct: 587 KGLEFRRVILTGLENGVFPR----------------DDEADIQEERRLMYVACTRAMDSL 630 Query: 728 YISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLP 762 Y++ PS + EL + + Sbjct: 631 YLTACAYRRMWGRHTAMKPSRFLTELDSALLEITDPR 667 >UniRef50_UPI0001B56A46 ATP-dependent DNA helicase n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B56A46 Length = 1057 Score = 189 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 115/968 (11%), Positives = 240/968 (24%), Gaps = 108/968 (11%) Query: 66 ASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF 125 + D L + + + L + + F+LLR L +++ Sbjct: 65 SRRAADALRADLTRRLTSDPDQESPLPRTVSEPLVRTVHSYAFSLLR--LEARAEELPPP 122 Query: 126 QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWH 185 +L A +Q +V R E G E A E L Sbjct: 123 RL---LAGA-EQDVVVRELLEGDLEEGATS--WPEQLR-PALTVPGFAEELRDLLMRAAE 175 Query: 186 RANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTN-PC 244 R + E L + + F + + ALG L Sbjct: 176 RGLGPEDLTE-LGHRQDREEWVAAGQFWAQYEEVTQLQGAGGNALGLPAAPALDAAELVT 234 Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV-GNPLLASW 303 D + R R +D + + ++ E V G+P + + Sbjct: 235 SALLALEDDEELRERERGRVRHLFVDDAHHLDPLQVQLIRTIGHTAEEFVVAGDPDQSVF 294 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 G D L +D ++ + H + + + A + Sbjct: 295 SFRGADPK-LFADSDNDGDRTVM-----LTTSHRLAPTVRAAVAKLGATLPGAS-PHRKL 347 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 P + + +P E + D+L D + ++ V+V +Q Sbjct: 348 VTPPGKRGGKVRVRLMPTPAAEASWIADQLRRAHLVD-GVPWSEMAVLVRSPARTFLVLQ 406 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR--FVSEDVLALLDVPVLAA 481 +A + ++ H + +++L + + LL + A Sbjct: 407 RALRAAGVPIG---SATEELPLAKHSAVRPLLAVLRIAAEPELLDVDIAEMLLSSSLGGA 463 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 R LR+ G + D+ V L +L+G A A Sbjct: 464 DPLALRRLRRGLRRLELAGGGQRSSDELLVEALRGGD------------ILVGLADNEAL 511 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 + + + V + L + + L + Sbjct: 512 PVRR----VGNLLSITHQAVSRGEGVEQVLWELWQASGLQERLLRLVDR----------G 557 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR--LDQERISQRFLAGPV 659 + A ++ + G A ++ D L+ + V Sbjct: 558 GSLGAQADRDLDAVVALFDSAGRYADRLPKASVAAFADYLSSQNIAGDTLAPAAIPGEGV 617 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD-----------LMSQKPKRGDRSR 708 ++ T + VV + G+ +G +P + Sbjct: 618 SLLTAHASAGREWTVVAVAGVQEGAWPDLRLRGSLLGVERLVDLLSGVDEHDKVSAIAPI 677 Query: 709 RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 ++R LF A A++ L ++ + + PS + +L + L Sbjct: 678 LAEERRLFYLAASRARRTLLVTAVA-----GEDEQPSRFLDDLEENGADDGMLDSRMKPP 732 Query: 769 CDESEARVK---AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK----AHSEFV 821 + + + + A +P A S Sbjct: 733 GRSLVLAELVGELREVVCDDKADPERRKRAAKQLARLAAAGVPGAHPDTWYGLPEASTED 792 Query: 822 QPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQIN 881 + T++ P+R + + + Sbjct: 793 PVHGPGDLMRISPSTVEILVKCPLRWLIERHGGSDPAQL-------------AAVTGTLV 839 Query: 882 QQLLNALVEQDDAERL---FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG 938 L A+ E++ D F Q ++ + RQ Sbjct: 840 HGLAQAIAGGSTEEQIQAALDEAWVRVDAGAPWFSRRERSRVEQMLRNFVSWLEKSRQEL 899 Query: 939 QS------MEIDLACN----GVQITGWLPQVQPDGLLRWRPSLLSVAQGM------QLWL 982 +E++L V + G + +V+ D R + + + Sbjct: 900 IEAGVEQDIEVELPMGDEEVRVLLRGRVDRVEMDKDGRPVIVDIKTGKVPVSGADAEKHP 959 Query: 983 EHLVYCAS 990 + Y + Sbjct: 960 QLAAYQLA 967 >UniRef50_Q600N7 ATP-dependent DNA helicase n=6 Tax=Mycoplasma RepID=Q600N7_MYCH2 Length = 769 Score = 189 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 83/609 (13%), Positives = 179/609 (29%), Gaps = 75/609 (12%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWH---RANLYQRFIETLESATTCPPGLPSRVFICGIS 217 + Q + + L+ + R A +FI ++ P L + Sbjct: 138 DEQDQKKIVEKLLGKYLKANDDRDETKISAFDAIKFISNAKNWEKSPEDLLKSINNELDQ 197 Query: 218 ALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLF 277 VY + L+ K I K P ++ + ++ + Sbjct: 198 IKVQVYQKYLEK-TKENNIIDFDDLLLYTKIAFEKSPEIRSRWQRKFDFVLVDEFQDTSL 256 Query: 278 RDSE-NAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 + + VG+P + G D +L+ PD Sbjct: 257 VQYLILKIFIKDKTRLVVVGDPDQTIYSWRGADPSLILN----------LEQDFPDLQTV 306 Query: 337 NIQSDILELENRA-VAGVNIEEFSRSDNKRPLDPLDSSITFH--VCHSPQ-REVEVLHDR 392 + + +N A IE K+ + I H + + EVE ++ + Sbjct: 307 ILDKNYRSTQNILDAANNLIENNQNRIKKKLVASSKEKIEIHFEDLANERGAEVEWIYRK 366 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 + ++ ++ +T RDI ++ F + +PY + + Sbjct: 367 IQELITKNK-VTYRDIAILARSN-----FYFKQIETKFDGHNIPYFRHGASPLVTKKEIR 420 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 + L + D+ +++VP I + L + + +G++ + Sbjct: 421 EALYFLKVIDN-SDPYAFEQIINVPP----KKIGIATINKLNELAAQ----FGLNLHDFL 471 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 + G + ++ + S + + L+ Sbjct: 472 FKYYSGKINFKGKQGKIPLGHDNQLKIKVLLERISAAKRFKSQIEEKKPCIFQFYSQVLD 531 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 + + + + DA+ + + +++ I+ A Sbjct: 532 SFLKKIDYFDAI----------------KDAKQASDTRNLLEKYYKIMDNWQKA--NPEK 573 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 LS D Q +N+ T+ + + F+ V L+GMN GV+P Q Sbjct: 574 KLSDYLDY----AAISHFEQTESQNKINLLTVHSSKGLEFEYVFLVGMNQGVFPAQKVLD 629 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS--YIGRSIQDNSERF------- 743 + S +++R L A+ A++ LYI+ Y S + Sbjct: 630 ----------QNSTSEYEEERRLAFVAVTRAKRVLYITNGYRAPSFARGLPQKFKTNQNI 679 Query: 744 PSVLVQELI 752 S V+E+ Sbjct: 680 VSAFVKEMK 688 >UniRef50_B3QYG2 UvrD/REP helicase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QYG2_CHLT3 Length = 700 Score = 189 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 63/530 (11%), Positives = 152/530 (28%), Gaps = 94/530 (17%) Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQE 322 R ++ + +E VG+ + + G +Y +L Sbjct: 243 LRYVMVDEYQDTNLVQAELVAHFSAVHKNVMAVGDDAQSIYAFRGANYRNILD------- 295 Query: 323 LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD---NKRPLDPLDSSITFHVC 379 F + P+ L ++ + + ++ P Sbjct: 296 ---FPNQFPECKLIKLEENYRSTPEILSLTNFVINRAKEKFTKTLFSRKPEGELPAIVSA 352 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 + + + R+L + + + R+I V++ + R +P+ Sbjct: 353 PDERFQTRFIAQRILEL--REEGVPLREIAVLMRNGRD-----SYALELELRKRNIPFVK 405 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 + ++ F++ L L + + L + + + + +WV + Sbjct: 406 FGGQKVVEAAHIKDFLAYLKLIYNPRDVISWNRV-----LQLLEGVGPKTAKQVIEWVKD 460 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 SG + I + S A Sbjct: 461 SGSPYEIGGV------------------------------------------KMSAKYAA 478 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA-FFLPDAETEAAMTLIEQQWQA 618 + +L LL L+ ++ L + +++ ++ + E + Sbjct: 479 SLKNLGDLLGSLSSGKKSLG--ETAAAVMNYYLPLMHEKYYEDFPKREKDLENFLNIIAN 536 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 P+ + E + P+ + T+ + + ++ V L+ Sbjct: 537 YQNLETLLAELALDPI--------ELTAIETEPAKPDEQPMTLSTIHSAKGLEWRTVFLI 588 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI---GRS 735 M DGV P + A D + D++ L A+ A+ LY+ Y + Sbjct: 589 NMLDGVLPSKYAVD------------DAASLDEELRLLYVAMTRAKSLLYVCYPIVCTQR 636 Query: 736 IQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 ++ PS +Q+L D + + L ++ + + + K L + Sbjct: 637 GFEDYMSNPSRFLQKLPDALYERILLVQEKRKSPPQLSGKAKPQLQKKAS 686 >UniRef50_A4F8N4 Possible ATP-dependent DNA helicase n=2 Tax=Pseudonocardineae RepID=A4F8N4_SACEN Length = 1051 Score = 189 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 114/900 (12%), Positives = 227/900 (25%), Gaps = 131/900 (14%) Query: 164 WQAPLWKALV----EYTHQLGQPRWHRANLYQRFIETLESATTCPPGL---PSRVFICGI 216 Q L + L+ E R A F E L P + G Sbjct: 128 DQDALVRDLLQGDLEEGAPDWPERLRPALSVPGFAEELRDLLLRAAERGVGPDGLVELGR 187 Query: 217 SALPPVYLQALQALGKHIEIHLLFTN-----------PCRYYWGDIKDPAYLAKLLTRQR 265 P ++ A + ++ ++ LL DP L R R Sbjct: 188 RHDRPEWVAAGRFARQYEQVTLLRGGGDAAGMDAAELVSSALLAFDTDPDLLHVERQRVR 247 Query: 266 RHSFEDRELPLFRDSENAGQLFNSDGEQD-VGNPLLASWGKLGRDYIYLLSDLESSQELD 324 +D + + +L ++ E G+P A + G D + Sbjct: 248 HLLVDDAQHLDPQQYWLLQRLGSTAAEFVLAGDPDQAVFTFRGADPGSVRDADPDGGNTV 307 Query: 325 AFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR 384 + + +A + P D S+ + S + Sbjct: 308 VLTVDHRMSKAVR-------AAVQRLAERLPGAGPQRRLAEPEDCPGGSVQVRLHASEAQ 360 Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E + D+L D + D+ V+V P ++ +A LP D Sbjct: 361 EAAWVADQLRRAHLLD-GVPWSDMAVVVRSTGLSLPVLRRALLAASVPLVLPV---DDVP 416 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 + ++LL + Sbjct: 417 LAQRTAVRPLLTLLRCAGRP-------------------------------QALDPDSAA 445 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 + ++ + A + + G + S + + D + L G Sbjct: 446 ELLASSLGGADPLALRRLRRGLRRLELAAGGSRSSGDLLVEVLRGDDALAALDDSSAGPA 505 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVC-------RDMLNAFFLPDAETEAAMTLIEQQWQ 617 + L + R + R +EE L + L A ++ Sbjct: 506 RKVAHLLKVAREAVDDGRSVEEVLWRVWQASGLQQRWLTVAERGGITGAQADRDLDAVVS 565 Query: 618 AIIAEGLGAQYGDAVPLSLLRDEL--AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 A ++ D L Q V++ T ++VV Sbjct: 566 LFEAAAQYVDRLPGADVAGFADYLTGQQIAGSSLAPSAPKENAVSVLTAHAAAGQEWEVV 625 Query: 676 CLLGMNDGVYPRQLAPLGFD-----------LMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + G+ +G +P + + ++R L L A A+ Sbjct: 626 AIPGVQEGTWPDLRLRGSLLGVERLVDVLSGVDAADRVSATAPLLAEERRLLLVAASRAR 685 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 L +S + + PS + EL + E V A L Sbjct: 686 SGLLVSAVR-----GEDEQPSRFLDELEGVVSD---PDSAERPIARPERGLVLAELVGEL 737 Query: 785 TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE----------FVQPLPFTLPETVPL 834 ++ D Q ++ A+ A + AH + + P V Sbjct: 738 RQVVCDVQAPARRRERAAAQLARLADAGVPGAHPDTWYGLPPSSCQSPLVEGDEPVRVSP 797 Query: 835 ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDA 894 T+ P+R + + S + L+ A + Sbjct: 798 STVDTLSKCPLRWMAERHGGQDTAELASVT-------------GTLVHALVQAAADGATE 844 Query: 895 ERL---FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN--- 948 E+L + D F + ++ ++A R + ++ + Sbjct: 845 EQLHRALDEAWESVDAGAPWFSRKERARVERMIESFQAWLVASRAELTQVGVERDLDLTI 904 Query: 949 -------GVQITGWLPQVQPDGLLRWRPSLLSVAQGM------QLWLEHLVYCASGGNGE 995 +++ G + +++ DG R + + + + VY + G Sbjct: 905 EGRDGGPSLRLRGRVDRLEADGEGRPVVVDVKTGKTPVSKNDAEEHPQLAVYQLAAALGA 964 >UniRef50_C7M335 UvrD/REP helicase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M335_ACIFD Length = 715 Score = 189 bits (478), Expect = 9e-46, Method: Composition-based stats. Identities = 69/543 (12%), Positives = 145/543 (26%), Gaps = 85/543 (15%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYI 311 P R R ++ + +L VG+ + + G D Sbjct: 202 RPELAEHWRRRFRHVLIDEYQDANPAQHAFVAELVGRSGSVFAVGDVDQSIYAFRGAD-- 259 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLD 368 + F + + ++ + A A + + + Sbjct: 260 --------PSGVLTFEERFDGAKVVTLEQNYRSTNAILGLANAVIAKNRRRYAKHLFSEL 311 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + + + E + + L+ + P +I V+ P Sbjct: 312 GEGTPARRYQATDERDEARWVAATVREFLQRG-GVDPSEIAVIFRTNAQSRP-----LEE 365 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A ++ +P+ + + ++ L + + + +L+VP Sbjct: 366 AFSEAGIPFRVVGGVRFYERREVRDLLAYLRVLANPDDDVALARILNVP----------- 414 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 GI G ++ L + Sbjct: 415 ----------RRGIGRGTEEALQAAAALRGRSMLSLLRA--------------------- 443 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 E GL + L + ++ + RP E + + + E Sbjct: 444 EGVEVLGLTSRQERALRGFVELIDRLGALASLHRP-SELIDAVVAETSYLEHLNEEDPIT 502 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + + + A A L L + + + A V + T + Sbjct: 503 LEGRLENIAELRASAAEAD--------DLESFLERAALVSAVDEVMGASGVTLLTAHAAK 554 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + F VV ++G+ +GV+P A + D +++R LF A+ A+ L Sbjct: 555 GLEFDVVVVVGLEEGVFPHVRAIV------------DAEAVEEERRLFYVAMTRARTTLV 602 Query: 729 ISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 ++ R PS + EL + + P C ES R A + R Sbjct: 603 LTSARRRASWGEPLYNPPSRFLDELPADLVATTAAPVAVGTACAESIQRASAVVEARAAR 662 Query: 787 MPF 789 + Sbjct: 663 SEW 665 >UniRef50_D1YBS2 UvrD/REP helicase n=2 Tax=Propionibacterium acnes RepID=D1YBS2_PROAC Length = 1071 Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats. Identities = 107/874 (12%), Positives = 204/874 (23%), Gaps = 123/874 (14%) Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 + A Q L K + + P +L R R ++ + ++ Sbjct: 228 VAAYQNLKKERGLVEFGDRMVQALHLVTHHPRVGEELRARYRVVLLDEYQDTSSAQADVL 287 Query: 284 GQLFNS--------DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVT-PDNL 334 LF+ VG+PL A + G +L + Sbjct: 288 AALFSGPDSAHGMGHPVMAVGDPLQAIYEWRGAAASNILEFHRRFPNKEGTPAQVLSLAT 347 Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD------------------SSITF 376 I+ N A + S +++ D +T Sbjct: 348 NRRCADQIINAANVASEELRQTLSSAAESDDHDPAGDRAEVAVGQPLIAPEGNRRGEVTV 407 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 +E + D L+ E D ++V + + R +P Sbjct: 408 AAYPDWVKECQACADILVEAKERGTIARWSDAAILVRRNSDVADLY-----DSLTARDVP 462 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 ++ P + ++ L L R + LL P L + + L + + Sbjct: 463 VRFANLSGLLRLPDIAMVVAHLRLLVDRQDDAAMATLLAAPRLGL----STDDLAMVYRR 518 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 D + P + + G + E Sbjct: 519 ARALAKARAKD-----DGLDPDDVEIHLSDAVMEGRPGGHERLQCAVKRVCAEIVEVDAH 573 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 + L + + +A + P + A ++ W Sbjct: 574 QGDSPDDLVLRIEAITGLIDDIAADDP-------------------HRSAARRDHLDALW 614 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 AI + D + V + T+ + + + +V Sbjct: 615 NAIREVRRSDPTMTITGIVTWLAAEEDVGDGLPRAATDDRDAVTVSTVHGAKGLEWPLVI 674 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD------------------------- 711 + M GV+P P F + R D Sbjct: 675 IPDMAQGVFPSTSTPDNFASEAAVLPSFARGDASDISHPLSGSVVDTKAYVAALKEDSQW 734 Query: 712 -DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 + L AL A+++L +S+ + P L D +G G+ N Sbjct: 735 AEARLAYVALTRAKERLVVSWHQWRPRRKGSLGPGRYADLLADMLGTVWPDFGERPDNVI 794 Query: 771 ESEARVKAHLTCLHT-RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP 829 ++ H PG+ W A + A LP Sbjct: 795 QAGTPWPVFADVGHGLIDNASRSVDDPGQADRVRAWWTDADALLKDARRHIDLQDEVALP 854 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV 889 + + R A+P + + R D G + ++ + Sbjct: 855 PRLTTSQIVRLHANPQAF------RDDLRRPMPRPAD------RGAGIGTAFHEWVSQRL 902 Query: 890 ---------EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD-RVIACRQPGQ 939 + ++ L + G Q + R Sbjct: 903 APAEPIPLFDAEEVAELDEENTTQEAVAAEPSGA-ESRALRSLCQAFEESRWAGATVLAV 961 Query: 940 SMEIDLACNGVQITGWLPQV--QPDGLLRWRPSLLSVA-----QGMQLWLEHLVYCASGG 992 + + G L V PD + +QL + L + + G Sbjct: 962 EKSFVMTIGQTVVRGRLDAVVADPDHPGDELVIDWKTSPPRSADPLQLSIYRLAWAQARG 1021 Query: 993 ------NGESRLFLRKDGEWRFPPLAAEQALHYL 1020 + P L A+Q L Sbjct: 1022 IDPSRVRAVFHHVGANETISAEPLLDADQVAAIL 1055 >UniRef50_A5VHK1 ATP-dependent helicase/deoxyribonuclease subunit B n=10 Tax=Lactobacillus RepID=ADDB_LACRD Length = 1260 Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats. Identities = 142/1132 (12%), Positives = 300/1132 (26%), Gaps = 212/1132 (18%) Query: 9 RLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLS---QKFGIAA------- 58 VL + V+ DD F LV + + L+ + G++ Sbjct: 15 HQQVLIDQLVDQVKNTPADDTF---YYLVPNHIKFETEINVLAGLRDRQGLSGSDRFASS 71 Query: 59 NIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDD 118 + + W + AF KQ +S M +L + +E + LR Y ++ Sbjct: 72 RVQVLSFSRLAWYLLRDTP-------AFQKQHLSKIGMAMLTSQVVQEQASDLRLYASEV 124 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWK---ALVEY 175 + +++++ +L + D QAW A ++ Y Sbjct: 125 KQPGFIQKMTAQLEEL-KNANITADDLTDIIYRVKSANDPAANQAWLAKMYDVETIYHAY 183 Query: 176 THQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIE 235 +L + LY++ + L+ + P FI + Q + AL + Sbjct: 184 EARLRDRYIGNSELYRQLVSYLQKS---PEVAKMHFFIDRFAQFTANEQQVVDALITNAA 240 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV 295 + R Y P + + + + + Sbjct: 241 STTISLTLDRGY------PDQNHPNPQELPPKNNLFYSSAMQFHRLWKFGQMHQKEVKVL 294 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 N A+ ++ + L ++S + A + P + Sbjct: 295 QNVAFATTPRVDAE----LQQVDSYFKRYASEPIGPGEREELL----------------- 333 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 +I F + E+ + ++ ++ RD +++ + Sbjct: 334 --------------DPQNIQFMTTTNRMTELNNVATQIRQLVASGK-YRYRDFLILSRHL 378 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 D Y I+ VF +P R +HP++ +LL LP + + D++ LL Sbjct: 379 DGYQTMIEPVFA----AHNIPVFNDHERLMDNHPLVTLLTTLLELPQRGYRTADIIQLLK 434 Query: 476 VPVLAARFDIT------------EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 +L R + + E W +D + A G + Sbjct: 435 TWLLVPRTGTGDLMGLSDFQAAVFTTENWCLKQAIEGKNAWTTNDPEKIKQLWQAPGTNL 494 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + L + V + + L L + + Sbjct: 495 TDPKYEQSRLEKLNDQLALVKDFVANHLLPVFDQFKQAQTGQELATALYQFLAAMGVTDR 554 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP------LSLL 637 L W D + + + I+ E + + L+ Sbjct: 555 LYAWQQY-------QSTRDLDLARQPQQVWTTFCQILQEYVEILGQQELRDGTNEVLADF 607 Query: 638 RDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + L + SQ V + ++S KVV ++G D V P Sbjct: 608 SELLQAGFAAAQYSQIPATLDQVVVSETGIVQSENRKVVFMIGSTDDVMPEMQESDSLLT 667 Query: 697 MSQKPKR-------------GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF 743 K + D+ ++ ++A+++L S +S D+ E Sbjct: 668 DQDKDILSAYLDEDFQYLPGTAIDQLIDEPFVHYTGFMNAKEQLIFSAP-QSDSDDKELS 726 Query: 744 PSVLVQELIDYIGQSHYL--------PGDEALNCDESEARVKAHLTCLHTRM------PF 789 S + ++ Y GQ D A++ + L + ++ Sbjct: 727 ISPYMHDMARYFGQPVREYPLATSKAGQDNAIDFVSAPLATINRLVEVSRQIRDEQGVGI 786 Query: 790 DPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPL--------------- 834 D Q P Q+ A + A Q ++ VQ +L + + L Sbjct: 787 DRQPVMPVGWQTVAESLVKLAKQWQQSADAKVQAEGISLGQRLSLVAAGFHYQNKIDSLG 846 Query: 835 -------------------------ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT-E 868 LQ F+ + F + L++ R E + D Sbjct: 847 NKLAQALYLRAAPDDERGRVLYASISQLQDFYINQYEYFLKYGLRLQKRDELTLSNDRIG 906 Query: 869 PFILEGLSRY------------QINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 F + + + + + +Q L L Sbjct: 907 TFFHKAMETFVTTIRENNLSFADLAHKDNQMQRDQLIDHALVTAQENQPTLLRLINSSAQ 966 Query: 917 WETQCQEMQQLADRVIACRQPG------QSMEIDLACNG--------------------- 949 + Q Q++ + ++ Q ++ ++ Sbjct: 967 AQFQYQQLTAIVKTMLITLCRQAEYTGSQPVKTEVQFGRIGNQQPGNLGSLDYPLKDNHH 1026 Query: 950 VQITGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL 998 + + G + ++ + + Y + L Sbjct: 1027 IYLRGRIDRIDNLKQGNNNFLTVVDYKSSNHLFDLTS--AYYGLSLQLLTYL 1076 >UniRef50_B6IP09 UvrD n=8 Tax=cellular organisms RepID=B6IP09_RHOCS Length = 1178 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 59/468 (12%), Positives = 131/468 (27%), Gaps = 84/468 (17%) Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAG---VNIEE 357 + +G G + +L F + ++ + + A + + Sbjct: 676 SIYGWRGAEVGNILR----------FDHDFTGARVIRLEQNYRSTAHILGAAHGIIANNQ 725 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + + E + D + A+ + L+ + V+V Sbjct: 726 GRLGKQLWTEVDGGEKVRVRGLWDAEEEARWVGDEIEAL--QRKGLSLGQMAVLVR---- 779 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 + F F LPY + + ++ L + +++VP Sbjct: 780 -AGFQTREFEERFITLGLPYRVIGGPRFYERQEIRDALAYLRIVAQPDDDLAFERIINVP 838 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + I + LR L G+ Sbjct: 839 ----KRGIGDATLRQLYVAARTLGV----------------------------------- 859 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 ++ E+ L ++ L +L+ + WR + + P + D Sbjct: 860 ----SLAEATWRLTETDELRGKVRSTLRALMEDIARWRGQIDRT-PHTDLAQAILDESGY 914 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 + + + + +I + L+ + +A +D S Sbjct: 915 TRMWQQDKSPEAPGRLENLKELINAMGEFE-----NLTGFLEHVALVMDNAEASGLE--- 966 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 V++ TL + + F VV L G +G++P Q + +++R L Sbjct: 967 QVSLMTLHGAKGLEFDVVFLPGWEEGLFPSQRTLD----------ENGIAGLEEERRLAY 1016 Query: 718 EALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQSHYLPG 763 + + ++++S+ S PS V EL + PG Sbjct: 1017 VGITRGRIRVHVSHAANRRIHGSWATSLPSRFVDELPAEHVEVENAPG 1064 >UniRef50_A3TGM1 Putative DNA helicase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TGM1_9MICO Length = 1103 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 95/836 (11%), Positives = 195/836 (23%), Gaps = 149/836 (17%) Query: 261 LTRQRRHSFEDRELPLFRDSENAGQL----FNSDGEQDVGNPLLASWGKLGRDYIYLLSD 316 R R ++ + L + VG+P + +G G L Sbjct: 281 RARHRVVLLDEFQDTSEAQLALLKALYVAPGETSAVTAVGDPHQSIYGWRGASATTLTRF 340 Query: 317 LESSQELDAFVDVTPDNLL-----HNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 F D P L S +L + N + + + Sbjct: 341 AVE------FGDPDPAQKLDLSTSWRNDSAVLAVANHLAQPLRAASRVKVEPLASRPGAG 394 Query: 372 -SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 ++ + E + + L + V+ ++ A Sbjct: 395 VGAVEVARLTTAADEADHIARW----LATHRSRGAVSAAVLCRKRAEFATVTA-----AL 445 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 + +P+ + P +E ++LL + + ++ LL P++ L Sbjct: 446 EEHGIPHEVVGLGGLLLTPEVEDVVALLHVVQDPARGDHLVRLLSGPMMRL----GIADL 501 Query: 491 RYLRQWVN-ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L W + +R G + ++L A + L + + V Sbjct: 502 DALAAWSRVQQRLRGGAVARHEKDLAPDAANAPSIIEALDSLPPRGWVGDEGERLSDVAR 561 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + + L PL + + L + E Sbjct: 562 DRLAGLAATVRRMRGLTFL--------------PLADLVLEAEKALGLDIEVLSRPEYTP 607 Query: 610 TLIEQQWQAIIAEGLGAQYG-DAVPLSLLRDELAQRLDQ----ERISQRFLAGPVNICTL 664 A D L D + +D+ +R V + T+ Sbjct: 608 AAARAHLDAFGDVAAQFSQSADRATLGGFLDWIKAAIDEERGLDRGYADATPDAVQVMTI 667 Query: 665 MPMRSIPFKVVCLLGMNDGVYPR------------------------------------- 687 + + + VV + + + +P Sbjct: 668 HAAKGLEWDVVAVPALVESTFPAHNLHSPSFKDGQWRISAPKDKGWLAGLQDGGLPYELR 727 Query: 688 ----------QLAPLGFDLMSQKPKR----GDRSRRDDDRYLFLEALISAQQKLYISYIG 733 + +G+D ++ + + G ++R L A A+ L ++ Sbjct: 728 GDRDGLPEFGWRSAVGWDELAARLEEFAVSGGEHAVAEERRLAYVAATRARHALLLTASV 787 Query: 734 RSIQDNSERFPSVLVQELIDY---------IGQSHYLPGDEALNCDESEARVKAHLTCLH 784 S + + R S + E+ + I + LP + + + Sbjct: 788 WS-RPKTPRVTSRFLDEVRELASVEGSPVRILEWVDLPVPPEDGSPLVKPGTEDGHEFVW 846 Query: 785 TRMPFDPQNYQPGERQSYAREWLPAASQ----------------AGKAHSEFVQPLPFTL 828 + + E A +A L Sbjct: 847 PVDHLGHRRVRADAAARAVTEASEGPESTSATVGPWARELDLLLAERARRASRHDDIVEL 906 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 P + +L F P R + R P R + Sbjct: 907 PSHLSTSSLVAFATDPERFAAE------LRRPMPSAPAQ------AARRGTAFHAWIEEH 954 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN 948 + LF +A + P G+ + L A ++ + Sbjct: 955 YARAAIVDLFDLPGSADEDP---MGDAELPAMRERF--LESPWAAREPIEIETALETVVD 1009 Query: 949 GVQITGWLPQVQPDGLL-RWRPSLLSVAQGMQLWL-----EHLVYCASGGNGESRL 998 GV I G + V D W + + L + Sbjct: 1010 GVAIRGRIDAVFADVEGSDWVIVDWKTGRKPSGEVARMRALQLAAYRIAWARLRGV 1065 >UniRef50_C5CHH9 ATP-dependent nuclease subunit B-like protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CHH9_KOSOT Length = 1030 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 93/749 (12%), Positives = 213/749 (28%), Gaps = 69/749 (9%) Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 ++ + FV+ + +I+ E R ++ ++ + K Sbjct: 218 NRCELFAEARTIIDFVEEREGK--IDSNGEIITSEKRFLSEQHLPKNLEPFLKTFFSEQK 275 Query: 372 -----SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 ++ V EVE + + ++ P DI ++ +D Y + +F Sbjct: 276 ITQSCENVEVIVASDIFNEVEYISREIKRTIKS--GYEPGDIAIVASDFSRY----EKLF 329 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV----LAAR 482 + +P+ ++ + + F E ++A+ D L + Sbjct: 330 SERLDEYGIPFRSEGDEPLLESRAVKMLLLPFETAVNGFKPEKIVAMGDFGYGGSKLDTK 389 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 F + L ++ ++ R Q R + + G Sbjct: 390 FFESIAIQARLIYDYPTLTLQKRVESWEERLERYKELVQRKIRAVEEISDEEFIEQEISG 449 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQL--------NIWRRGLAQERPLEEWLPVCRDM 594 + +L DE E + + + L + ++ +EE + Sbjct: 450 YREVILRVDEEIEPAIERIFQVLAPFRSLSRRDCRIYREYFYEWSELIRIEERYRKLVEE 509 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAII---AEGLGAQYGDAVPLSLLRDELAQRLDQERI- 650 E E + +++ + ++ E L + + + L L Sbjct: 510 SEEEPFRKLEGERELLALKRFFNDVLPALEELLLFLGKERISPADYHRYLMLILRNTSFK 569 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL--GFDLMSQKPKRGDRSR 708 S R + V I +L+ R K+ +G NDG YP F +K + Sbjct: 570 SSRAIENRVEIQSLLNARFSRKKIKFFVGFNDGYYPMIRMNPLYSFTQYDEKAPKDLLLV 629 Query: 709 RDDDRYL-FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 ++ + L A+ +LY SY S D PS +Q++I G + G + Sbjct: 630 KEKQQKLNLYLAVTRTSDRLYFSYPE-STIDGEPLLPSAYLQDVIKSAGVTPERVGQKEG 688 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW--------LPAASQAGKAHSE 819 + ++ ++ ++ + G +S + L ++ Sbjct: 689 RKVDIIPELETVMSEKELKIAVAN-YFNTGHWKSLKDRFGMGDLEKVLQGFNREFTWIIS 747 Query: 820 FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 + + + + LQ + P + L++ E F L L Sbjct: 748 NRKKIEDHIGKVFSFSRLQSYHKCPFSFYLAYILKIQTPEE-------GLFELTPLEEGN 800 Query: 880 INQQLLNALVEQDDAE---RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD-----RV 931 + +L + + L R + +E + + + ++ Sbjct: 801 VYHNVLKDYFSKSALDWEKSLEENMRKYIRHDSELVFKFEYERLRRVIAEYIQIKESKKL 860 Query: 932 IACRQPGQSMEIDLACN-----------GVQITGWLPQVQPDGLLRWRPS-LLSVAQGMQ 979 + +L I G + ++ D + Sbjct: 861 PKVEGEFEPTYFELGFGMGNQKPVKVLEDAYIRGKIDRIDVDKDTGAMYIMDYKRGNSGE 920 Query: 980 LWLEHLVYCASGGNGESRLFLRKDGEWRF 1008 L A+ + + + G +R Sbjct: 921 KEQLILYSIAANELLKEKGYFVVGGSFRP 949 >UniRef50_C8XJ57 UvrD/REP helicase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XJ57_NAKMY Length = 1106 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 125/1000 (12%), Positives = 239/1000 (23%), Gaps = 152/1000 (15%) Query: 125 FQLSSKAADLFDQYLVY--RPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQP 182 +QL+ + +D L+ PD + + + L + L L +L Sbjct: 143 WQLARRVVGRWDGDLLTDLGPDQVTE-RLLAISSALADHLTDVDLLSDELATVLDRLRSA 201 Query: 183 RWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTN 242 ++ L R +I P+ ++A + Sbjct: 202 PPGP----RQRAALHSGLAGPVKRLQDRQWIL------PLVAAYVRAKRDRGVVDFADQM 251 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG----------- 291 + P + R R ++ + LF Sbjct: 252 QIAATLVR-EHPRIGEAMRERYRVVLLDEYQDTGHAQRVILRSLFGDRDGAGRAGGHGQA 310 Query: 292 -----EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS--DILE 344 VG+P+ + + G L + L + + +LL + ++ +L Sbjct: 311 RWGHPVTAVGDPVQSIYSWRGASASN-LPRFVTDFPLASGRPSSIRSLLTSFRNPGAVLA 369 Query: 345 LENRAVAGVNI--EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL-----AML 397 L N V + + + + + + ++E L + + A+ Sbjct: 370 LANEVSRPVRQGGRAVEVGELRPTPAADPGRLRYGLFGTAEQENAWLAEAIAGYWRDALD 429 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 E TP V+V + A LP + P + ++ Sbjct: 430 EGGAGATPPTTAVLVRRRSDMADT-----ADALRAAGLPVEVVGLGGLLDEPEVADLVAT 484 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L + + L + AR+ + L L E D + Sbjct: 485 LRVLVDPTAGPAAMRL----LTGARWQLGAADLEALAARARELAGPARPADGHGAGGPAD 540 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 T + + + A L L R Sbjct: 541 PTAVVRSAVAAALPVEDI---DTWSMVDAAGDLGPAQAYSAAGHRRLVRFAAHLARLRAR 597 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 L +PL + + + L A + + A L Sbjct: 598 LN--QPLPDLIADLERACHLDVESLVAGTGRAHLDA---FAAVVAEVAATGAGPAELLEY 652 Query: 638 RDELAQRLDQERISQRF-LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF-- 694 D A+R D + +G V + T+ + + +++V + + +GV+P Sbjct: 653 LDAAAEREDGLTPGEVPQPSGRVQVLTVHAAKGLEWEIVAVPHLTEGVFPITRGSTWLGD 712 Query: 695 ---DLMSQKPKRGDRSRRD---------------------------DDRYLFLEALISAQ 724 + R D + ++R L AL A+ Sbjct: 713 PAQLPPQLRGDRDDLPQLAWPAGGTQKDLADALAAHAAEFGELRLTEERRLLYVALTRAE 772 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 + L S PS ++E + + P + A E + T + Sbjct: 773 RTLLFSGHHWGTGLAKPAGPSPFLEECA-ALARPFAEPDEWAPPPATDEGQQLLPRTAVW 831 Query: 785 TRMPFDPQNYQPGERQSYAREWLPAASQAG------------------------------ 814 P P+ + L + A Sbjct: 832 PIDPLGPRRPHVQVGADRVLQALADLAAAEPEPVEDRPGTADEVDTGDPFGWAADVTTLL 891 Query: 815 -KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE 873 + + LP T+ + +L P RL TE S Sbjct: 892 AERSDRGREVHEVELPGTITVTSLVELADDPAE--LARRLTRPVPTESS----------G 939 Query: 874 GLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA 933 LSR L + L A + E + LA Sbjct: 940 RLSRGTDFHAWLEHRFRGEALLELSDLPGAGDAWVGA---DPEIEDLKRRF--LASPWAD 994 Query: 934 CRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGM--------QLWLEHL 985 + G+ + G + + D QL L Sbjct: 995 RVPIDVEVPFASRIAGLGVRGRVDAIFADADGGITVVDWKTGHSPLREDAAAVQLACYRL 1054 Query: 986 VYCASGGNGESRL-----FLRKDGEWRFPPLAAEQALHYL 1020 G +R+ ++R L + L Sbjct: 1055 AIAQLHGLPLARVRAAFHYVRSGVTQSPANLLDADGIEAL 1094 >UniRef50_B3R0N7 ATP-dependent DNA helicase n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3R0N7_PHYMT Length = 708 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 42/522 (8%), Positives = 150/522 (28%), Gaps = 85/522 (16%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE-QDVGNPLLASWGKLGRDYIY 312 + ++ + F + L + VG+P + + G + Sbjct: 201 ENIKNYFQNKFTHILIDEFQDTDFLQYQILKLLNTKNNYIFAVGDPDQSIYSFRGAEITN 260 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS----RSDNKRPLD 368 F+ L + + N + + + + + Sbjct: 261 ----------NKLFLKDFKAKTLI-LDENYRSTNNILDKANLLIQNNSFYGFTKKLQSFF 309 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + + + +EV+ + +++ +++++ DI ++ ++ F Sbjct: 310 GKGHKVFPKMFENDDQEVDFVAEKIKNLIKKEK-CNYEDIAILYRLNG-----LEKKFEK 363 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + +PY + + ++ ++ + + + +++VP I ++ Sbjct: 364 IFLKKNIPYIVFGNINFFNRKEIKDILAYIKILIDPKQDFYLKRIINVP----SRKIGKK 419 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + L E I +++++ Sbjct: 420 TISNLEIISKEKNI---------------------------------------SLFETLI 440 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + + + + +L++++ + + LE + +N + + Sbjct: 441 LLCKEEKKCNKNLLNFKNLILEMIKKINSNSFLK-LENIIDYIDQKVNYSKSINKKKINP 499 Query: 609 MTLIEQQWQAIIAEG--LGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + + + Q L D L Q + + V + T+ Sbjct: 500 ENDNLTYIEDLKSFFTKKKDQDKKKTVKQELIDILDQISLNNEVKKD-NKNKVTLSTIHK 558 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 ++ + FK+V ++ + + P + + +++R + A+ A+++ Sbjct: 559 IKGLEFKIVFVVYFEENILPLKNNKY-------------NAPLEEERRIAYVAITRAKER 605 Query: 727 LYISYIGRSIQDNSER---FPSVLVQELIDYIGQSHYLPGDE 765 L++ + S + + ++ + + + Sbjct: 606 LFLLGAYERNIFGHKTINIKESDFFENMKIFLPRKKSISESK 647 >UniRef50_B8FBU8 UvrD/REP helicase n=2 Tax=Bacteria RepID=B8FBU8_DESAA Length = 1156 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 78/525 (14%), Positives = 152/525 (28%), Gaps = 101/525 (19%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASWGKLGRDYI 311 D Y L R ++ + QL +G+P A +G G D Sbjct: 692 DSLYRESLQKRFPHVCVDEFQDVNHVQYRLLRQLCPPEADLTVIGDPDQAIYGFRGSDVG 751 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA-VAGVNIEEFSRSDNKRPLDPL 370 + + F + P + + ++ E VAG + + + Sbjct: 752 FF----------NRFGEDYPQARVIELSTNYRSTETVLKVAGQVMGDPGQDFGLHSGIVG 801 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAML----------------EEDPTLTPRDIIVMVAD 414 I + E E + + +M+ + D V+ Sbjct: 802 ADQIMIIDTPTSAAESEAIVHIMESMVGGVSHFSLDSGRTDMDAGSEDWSFGDFAVLFRT 861 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 P A +PY + D++ HP +E +S + L + D+L ++ Sbjct: 862 RIQLPP-----LTEALDRSGIPYQVVDKKRLVDHPGVEELLSYIRLINQTGTDLDLLRIM 916 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + P + I ++ + LR W G + R L LP Sbjct: 917 NFP----KRGIGDKTIETLRTWGESQGKSLIEALEVARRLPLP----------------- 955 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 GL L S+ + R+ + E + + Sbjct: 956 --------------------GLSNSQQIKLHSVWKTITEARKKILDLPLPEALEHLMYTI 995 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 + + I+ L D + D + + Sbjct: 996 PLEPLYTRSGNGRTAS------ACILDMAQDFDGD----LGRFCDMVNLASDADTL--EP 1043 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 A V++ T+ + + F+ V + G DG+ P + G S +++ Sbjct: 1044 EADRVSLMTMHAAKGLEFRGVFVTGCEDGLIPYF-------------REGKESDPEEELR 1090 Query: 715 LFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQ 757 LF AL AQ++L+++Y R + PS + + + + Sbjct: 1091 LFYVALTRAQRRLWLTYAKRRRMFGKVISQQPSPFLTRIKEEMKD 1135 >UniRef50_Q03D70 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Pediococcus RepID=ADDB_PEDPA Length = 1192 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 125/1107 (11%), Positives = 277/1107 (25%), Gaps = 193/1107 (17%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQW---LQMTLSQKFGIAANI------DFPL 64 + V + + +P LV + Q L L Q+ + ++I Sbjct: 15 LEGIADRVIELQQQNVGQPVYYLVPNHIKFQSEIQLLQKLRQRRDVKSHIFAEKDVQILS 74 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 + W + P++ LL + + D+ L Sbjct: 75 ISRLAWFFLRNSS-----------------IYQY-PRVTSSSSNMLLYRVILEHQDELTL 116 Query: 125 FQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRW 184 F Q L + + + Q Sbjct: 117 F----------------------------------HNIDAQLGLVQKIATQLAEFKQGNV 142 Query: 185 HRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPC 244 L R E + + + +++ GI A + I+ + + Sbjct: 143 GPDEL-GRVAENIAENSDAGMDIKAKLHDLGI---------IYSAYEEEIQSRFIDASDI 192 Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWG 304 + D L+ S E + PL + Sbjct: 193 THTLTDELSKMDLSGQSFIISGFSNFTAEEMSLIQALMKANGNVVIDLIMDKFPL---YE 249 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK 364 K+ + + E+ + + F +N + +++ L + +E++ ++ Sbjct: 250 KVSENSL----FFENEKIIFKFNAWAHENKVKSLEPVRLHRVRVNSDLLKLEKYWIESSE 305 Query: 365 RPLDPLDSS----ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + +T +S EVE + + + +DP+L D V+ + YS Sbjct: 306 GQVGGSKQENNACVTIFQANSRYAEVEHVATLIRQKMAKDPSLKFSDFSVLTRHLSDYST 365 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 I+ +F LP + A + HP+LE +L + F EDV+ LL +L Sbjct: 366 IIKPIFDQ----MELPIFYDLQIAMKDHPLLELINALFDIRAHHFRYEDVMRLLKTGLLF 421 Query: 481 ARFDITEEGLR-----YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 + G+ ++ + +G ++ + + Sbjct: 422 PETEDDPHGMDFFKSVHITENYVLKQGIYGDRWLQKKDWKYSRFNDIDEEKQTDEEI--E 479 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 + V L + ++ L W + Sbjct: 480 INQRINTVKNYVAETVVPFFNQLSTATTGVEAAKALYDFLIKNGIDQCLLAWRDQWIE-- 537 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 A + + ++ E + L + SQ Sbjct: 538 ----EGRLAKAAEPEQTWETFIQMLDEFVDILGDQPFDPDNFMGLLNAGFEGATYSQIPS 593 Query: 656 A-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP------------LGFDLMSQKPK 702 + + ++ + K+V ++G D V P Q+ F Q + Sbjct: 594 TLDQILVSESGMVQMVDRKIVFIIGATDRVMPEQIQDNDFLNQDGKNQIDPFLDDDQFLR 653 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 + + + YL + +L SY +S D E S V+ + + G Sbjct: 654 ISNDRQMRQEPYLNYLTFMIGSDELIFSYP-KSGNDGVELKISPYVERIGKHFGIIAQSL 712 Query: 763 GDEALNCDESEARVKAHL-----------------TCLHTRMPFDPQN------YQPGER 799 L + DP+ + Sbjct: 713 PSRPTTEPVRLDPPFIELFIGSNRSTLSHLIQYARAMHEAKSEADPRWNLIYTILRQSTL 772 Query: 800 QSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP--LETLQRFWAHPVRAFFQMRLQVNF 857 S + L + + + +T+ + L+ F+ + F + L++ Sbjct: 773 GSLTDQLLSSLEYKNIPEKLKPEIVEGLYGDTIYASVSKLEEFYRNEYSYFLKYGLKLQE 832 Query: 858 RTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL-------------------- 897 R E L Q ++ L++ E L Sbjct: 833 R---------ETSDLSPADTGQYFHAAMDKLIKMITTENLNFNEVNQEQIEQIAKRLVQQ 883 Query: 898 ----FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL-------- 945 + + G G + T ++ + ++ R + E Sbjct: 884 MEQDQQFDQFNGTYRMGFLRKQLDRTVQAMVEAIFKQLARTRMRPIASEQLFGQIGSQSG 943 Query: 946 ---------ACNGVQITG---WLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN 993 + + G + +++ + + + Y Sbjct: 944 LPALNFKVGEGKEINVRGKIDRIDKIEIGDKDYLGIVDYKSSNRKFDFTD--AYYGLAMQ 1001 Query: 994 GESRLFLRKDGEWRFPPLAAEQALHYL 1020 L + + + + P + L Sbjct: 1002 MLMYLDVVQRNKEKIDPATKAEISSAL 1028 >UniRef50_A5WC18 UvrD/REP helicase n=2 Tax=Psychrobacter RepID=A5WC18_PSYWF Length = 742 Score = 187 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 69/638 (10%), Positives = 158/638 (24%), Gaps = 114/638 (17%) Query: 152 GHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRV 211 G + L Q + K + + + R Q I T + L Sbjct: 202 GDSEDALDMICKEQGIVRKNMKQ--------AFPRKKTLQNLISTSRNRHILLRDLIEND 253 Query: 212 FICGISALPPVY--LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSF 269 + +P + A + ++ + + + + + R Sbjct: 254 YPDIAIHIPLIEDLAMAYHKYKRANHLYDFDDIISQVVYHLKNNLQFRKLIQDTYRHVMV 313 Query: 270 EDRELPLFRDSENAGQLFNSD--GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFV 327 ++ + + L D VG+ + + G +Y +L F Sbjct: 314 DEYQDTNIPQKQLIDYLCEPDNVSLMVVGDDNQSIYAFRGANYENIL----------LFA 363 Query: 328 DVTPDNLLHNIQSDILELENRAVAGVNIEEF----SRSDNKRPLDPLDSSITFHVCHSPQ 383 D PD L ++ + + E + L T + + Sbjct: 364 DGYPDAKLIKLEQNYRSTPAILDYVNALSEHITLGYQKKLFSNLAIEGEKPTLCRRSNDK 423 Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 +E + D+++ + P D V+ F R +P+ + Sbjct: 424 QEAVYIADKIIEL---KPEYDFNDFAVLSRT-----SFQSNEIQLQFMQRNIPFIVVGGI 475 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 ++ ++L+ + + + +L Sbjct: 476 KFIEKRHIKDILALVKILYNPNDTIAWHRIL----------------------------- 506 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 T G+ + ++ S+ P + + Sbjct: 507 -------------------TLFSGVGDVTASKITQAITSSNDSLQPLLDPKLTKNKAP-- 545 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 + +L Q+ + + L D + + + + E Sbjct: 546 ----INELYHVLIKAQQQATVADILQTLIDFYAPILKTLEDNWRERSEDFRVLINLAQEH 601 Query: 624 LGAQYGDAVPLSLLRDEL-----AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 L + L + + V I T+ + + + VV + Sbjct: 602 SS--------LDNFLENLALDPPNDSVAVMTNPEDKQTDAVTISTIHSAKGLEWPVVFVN 653 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR-SIQ 737 + DG+ P + F +++R LF A A+ LY++ S Sbjct: 654 ALVDGLMPHHRSLHEF------------EALEEERKLFYVACSRAKTHLYLTAPDYFSSF 701 Query: 738 DNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 S + E+ Q + +S Sbjct: 702 AGYFDKISRFISEVATDTLQVDAAESIRKSDDSQSNDP 739 >UniRef50_C6P8R1 UvrD/REP helicase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P8R1_CLOTS Length = 1088 Score = 187 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 85/815 (10%), Positives = 209/815 (25%), Gaps = 167/815 (20%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN------SDGEQDVGNPLLASWG 304 + D + R + ++ + +L VG+ + +G Sbjct: 259 LSDDSKRDSYFERYKYILVDEFQDINQIQKRIILKLAEKNGVIPEGRLFIVGDYKQSIYG 318 Query: 305 KLGRD-------------------------------------YIYLLSDLESSQELDAFV 327 G D + LL E + L+ Sbjct: 319 FRGTDYRIFEEFCEKIKKEGDVLNLSNCYRSTKNIICTVNSVFKNLLEPYEELKYLNDTE 378 Query: 328 DVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR-EV 386 + L+ + +I + N + S ++ + L I S + + Sbjct: 379 EGPKVELITYNKQNIADPRNERFQSIKKLLKDDSKSEELHESLMKDIK--KSESKRDFQG 436 Query: 387 EVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 ++ R+L +L D DI +++ +A +PY + Sbjct: 437 SIIASRILKLL--DEGYKYEDIAILLRSRTGLESV-----ENALLKYGIPYCVIGGIGFW 489 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 + ISL L +L +L P+ +++ + L N+ G+ Sbjct: 490 DKSEIIDIISLYKLVFDMSDKIALLVVLRSPIFG----FSDDDVYNLMSIYNDEGLS--- 542 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 +++ + ++ + Sbjct: 543 -----------------------------------NILEALEKLTCINRSNEWIIVRAYN 567 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVC-RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 +L +++ E+ L + L + + +E+ + + + Sbjct: 568 ILKEISNLNGIYGAYEIFEKILDLVDYKKLLISLPNGYQKYRNIEKLEKIIKDFTDKDIF 627 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN---- 681 LS ++ LD E + V I T+ + + F+ V + M+ Sbjct: 628 NARDLVEYLSSFKEF--SGLDSEAFLDTEESDAVKILTIHASKGLEFEAVIIPDMDKATD 685 Query: 682 --------------DGVYPRQLAPLGFDLMSQ---KPKRGDRSRRDDD----RYLFLEAL 720 DG +L + + K + + R LF A Sbjct: 686 GVSIRHNHLFMLSEDGYMYGIGVNEEGELDKEANSRYKSAYDEYLERENQESRRLFYVAS 745 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 A++ L ++ L + + L Sbjct: 746 TRAKRFLAFIGQEKNKTS---------------------------ELQNETALNSFMKQL 778 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREW-----LPAASQAGKAHSEFVQPLPFTLPETVPLE 835 D + Y R + + + +P + + Sbjct: 779 FYAMDIDDIDIAVLNGNDLLMYDRNIKICKSYDKSEIGKLKNDNLIAEIPLKPQGNISIT 838 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-----DTEPFILEGLSRYQINQQLLNALVE 890 + + P +++ +N + ++ + + ++ L R I ++L + Sbjct: 839 AYIDYLSCPKLYYYKYIAALNDEYIEEQLKNDDFYEYDALDIDALERGTIVHRILENISI 898 Query: 891 QDDAERLFRRFRAAGDLPYGAFGEI--FWETQCQEMQQLADRVIACRQPGQSMEIDLACN 948 D + D+ G I +++ + + L +++ + L Sbjct: 899 LDSNASSPKNGIDGIDVDNGIKKYIDNYFKIIKEHRKVLKGKLLKSLNEYRFRV--LLDE 956 Query: 949 GVQITG---WLPQVQPDGLLRWRPSLLSVAQGMQL 980 + + G + + DG + + Sbjct: 957 NLNLNGVIDRIDIYENDGEIEAYIFDYKTNKINND 991 >UniRef50_B0S8V9 ATP-dependent DNA helicase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S8V9_LEPBA Length = 664 Score = 187 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 53/531 (9%), Positives = 137/531 (25%), Gaps = 97/531 (18%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 D + ++ + ++ + + A L + VG+ +G G Sbjct: 204 DESIRERMSSVYEYILVDEYQDTNRIQAHIACLLASKHQNILVVGDDAQCIYGFRGASVH 263 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI----EEFSRSDNKRPL 367 +L F + P+ + + ++ + E + + Sbjct: 264 NMLD----------FPKIFPNTNTIQLTKNYRSVQPILNLANAVLEKSSENYKKNLVSAF 313 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + S + E E +++L + + +T ++ V+ + F + Sbjct: 314 PKNSKNPYLVQLPSLEEEAEWTSNQILELY--EEGITLSEMAVLFR-----AGFSSHLLE 366 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + +PY R ++ I+ L + ++ + L I + Sbjct: 367 VQLNSKKIPYRKYGGRRFFDLAHVKDMIAYLKIIENPKDILSWNRI-----LLLEDQIGK 421 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + L + + + +W D+ Sbjct: 422 KYSILLFKKLESNQFQWKDDEHF------------------------------------- 444 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + + L L ++ ++ L + + Sbjct: 445 --FLGLPETTKDSFLKLMHCLDSVSPVI------HSTQQILERILAYYFPLLESNYDDAE 496 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER---ISQRFLAGPVNICTL 664 + LS L + + S + + T+ Sbjct: 497 KRKQDLDALVLL--------SKQEPKLSDYLSNLILNPVEGKEIGTSNEVEDEFLTLSTI 548 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + + +K V L + +G P +++R LF A+ A+ Sbjct: 549 HSAKGLEWKYVFTLQVVEGNLPHSRIRTT-------------DELEEERRLFYVAITRAK 595 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 + L+++ + + N S + +L +L A + E Sbjct: 596 EALFLTNPAFNDK-NRFTPVSRFLSDLPKENQLLQFLDPKNAQSPKEIPKD 645 >UniRef50_C4DDU1 DNA/RNA helicase, superfamily I n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DDU1_9ACTO Length = 1029 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 96/888 (10%), Positives = 219/888 (24%), Gaps = 96/888 (10%) Query: 164 WQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGL---PSRVFICGISALP 220 Q + + L+ + A + F L R+ G Sbjct: 122 EQDVIIRELLAHDAVEWPEAVRPALGTRTFAAQLRDLLLRATERGISAPRLARLGREHDR 181 Query: 221 PVYLQALQALGKHIEIHLL--FTNPCRYYWGDIKDPAYLA-----KLLTRQRRHSFEDRE 273 P ++ A + +++++ L T Y +I A +L+ + ++ + Sbjct: 182 PEWVAAADFMTRYVDVLALRSLTGGATYDSAEIVRAAASELADDPELVPPPKFTFVDEVQ 241 Query: 274 LPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPD 332 E + G+ A++G G D L + D + Sbjct: 242 DLDPAQLELLRLVAGQGANLVAFGDADSATFGFRGADVRLLREFGDRFPTADGDPAPEVN 301 Query: 333 NLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR 392 + + L VA + + S ++ + + Sbjct: 302 LATCHRSASALLNATSLVAKKLRGTDRFRARAPRPEVGAGQVEVAALRSAAQQAAYIARQ 361 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD-RRARQSHPVL 451 L + + V+V + P + A +P I+ +A + P++ Sbjct: 362 LRVAHLR-EGVAWSQMAVIVKSAAEHLPVV----ERALRHAGVPVEIAAIDQALSARPIV 416 Query: 452 EAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 ++++ + + L + G D + Sbjct: 417 RHLLTIIQCGLNP-----------------------KSLDEDTAVALLHSVYGGADSLSE 453 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 R L + LP + + + G + + Sbjct: 454 RRLRQELRRLAHAADVFRSPGELLVEALRDPAELTALPEEPWAEPPRRIAGLMECVRSAT 513 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 L + + + + + + A Sbjct: 514 GSVEDVLWAVWERADLSRRLARRAVSRDSRAVAADGDLDAMMTLFDWAADFADRLPGAGA 573 Query: 632 VPLSLLRDELAQRL-DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 + L Q L R +Q V + T + + + +V + G+ +G +P Sbjct: 574 DVFAA--HVLEQVLPADTRAAQARRGETVQLLTAHSAKGLQWDLVVVAGVQEGTWPNLRP 631 Query: 691 PLGFDLMSQKPKR--------GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 + D++R LF A A+ +L ++ + D E Sbjct: 632 RGSIMGSEALVETVTSGTVVDTMTLLLDEERRLFYVAATRARDRLIVTCVA----DEDEN 687 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 PS ++EL + L + + A L ++ + Sbjct: 688 QPSRFIEEL------GITVERPARLERPMTLPSLVAELRLAACGPAGRRKDAAIAQLSVL 741 Query: 803 AREWLPAASQAGK----AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFR 858 A++ +P A S+ + V T++ +R + Sbjct: 742 AKQAVPGADPEEWWGLRPISDHAPLILPGERVKVSPSTVELVEQCGLRWMLERHGGTEPS 801 Query: 859 TEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAA--GDLPYG--AFGE 914 + A DD + F A LP+ + Sbjct: 802 GLPQ-------------EIGNLVHAAAEAAAVTDDPRQAMADFVAQHLAKLPFEAPWKAK 848 Query: 915 IFWETQCQEMQQLADRV----IACRQPGQSMEIDLACNG----VQITGWLPQVQPDGLLR 966 E + + A + + + L +++G + +++ D R Sbjct: 849 QDSERVRSMVDKFASWLESNNRDLVAAEKRFTVKLPDGPPGVTTELSGAVDRLERDLHGR 908 Query: 967 WRPSLLSVAQGMQLW------LEHLVYCASGGNGESRLFLRKDGEWRF 1008 + + + Y + G + G Sbjct: 909 LHVVDIKTGKTPISAAEAETNPQLAAYQVAVEAGAFAEHGLEAGGATL 956 >UniRef50_B6K032 ATP-dependent DNA helicase srs2 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K032_SCHJY Length = 819 Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 72/615 (11%), Positives = 166/615 (26%), Gaps = 102/615 (16%) Query: 181 QPRWHRANLYQRFIETLESAT------TCPPGLPSRVFICGISAL---------PPVYLQ 225 R N+ ++ +E L A L V + +S + L Sbjct: 115 IDRTEATNIMKQLLERLRKAKNPTADGIRGQELTPNVALSRVSRMKSSGLIAKPHCEQLS 174 Query: 226 ALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLL----------------TRQRRHSF 269 L L + T + Y ++ Y+ + Sbjct: 175 CLPGLTVNTNQSFQSTELYKLYQAVLRKNGYVDFDDLLILFIQLVHDHTYCIDNIKHILV 234 Query: 270 EDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVD 328 ++ + L VG+P + +G + L+ Sbjct: 235 DEFQDTSKIQYLLIKLLARDTSGITIVGDPDQSIYGFRSAELGNLVMM----------TT 284 Query: 329 VTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS---SITFHVCHSPQRE 385 PD + +++++ ++ + I ++ ++ L F S +E Sbjct: 285 DFPDTRVFHLETNYRSADSILETAMAIINQDKARPQKTLRTSHRLSIKPYFKEFDSNDQE 344 Query: 386 VEVLHDRLLAMLEEDPTL-TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 + + M++ P L + DI ++V + A A++ + Y + Sbjct: 345 SAWVACEIKRMVKSCPGLFSYSDIAILVRSSS-----LTRAIEHALAEQGIAYKMVGVHK 399 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 + ++ + R + ++ +++VP +I + + + Q Sbjct: 400 FFDREEVRDVVAYARVVAFR-DEQALMRIINVP----SRNIGKVKVERILQETERRHTS- 453 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 L L G + + + + + D S+ + L Sbjct: 454 -----MWNTLCLLNNGSFSLSQRVDKQFQRELGKFMHVINTTEASCDSSAPFSISSM--L 506 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 LL ++ + + + + E + Sbjct: 507 EILLRKVKYY--------------EYLKKKHPSTYEEKWENVMELIRQSDVLGEQGVLFD 552 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 L+L R + + V I TL + + + VV L + D + Sbjct: 553 DEDDISENRLALHRFLANAAIVGSTDNNEETRHQVTISTLHAAKGLEWPVVFLPCLCDTI 612 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS--------YIGRSI 736 P + D++R L + AQ LY+S + S Sbjct: 613 LPHSRSTD----------------VDEERRLLYVGITRAQAMLYMSSFRGMQSNFFSVSS 656 Query: 737 QDNSERFPSVLVQEL 751 + + S + ++ Sbjct: 657 SETTHMKRSRFLSDI 671 >UniRef50_A5UVF1 ATP-dependent DNA helicase, Rep family n=6 Tax=Chloroflexi (class) RepID=A5UVF1_ROSS1 Length = 659 Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 77/623 (12%), Positives = 171/623 (27%), Gaps = 100/623 (16%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 A+ Q L A ++ + L + + P L +R ++ Sbjct: 119 AEDEQVHLASAALDAARERPPALLEPEELLRHISR--AKSRLLTPRLAARFARDDLARFV 176 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 Q Q + + + P L +R R ++ + Sbjct: 177 AGCYQRYQRSLERANALDFDDLILLTHRLFSEHPDVLDACQSRWRHVLIDEYQDTDPAQH 236 Query: 281 ENAGQL-------FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDN 333 L VG+ + A +G D+ + F PD Sbjct: 237 ALVELLTRPSPANGGVRSLFAVGDGMQAIYGFRNADHT----------IISRFERDFPDA 286 Query: 334 LLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS----------SITFHVCHSPQ 383 + + ++ + A + SR+ L + + Sbjct: 287 RVIELATNYRSRQPILDAAYAVIRHSRTVQPMALRATKPETPRGVGYTSPLQIVDAKDAR 346 Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 E E + + +L + P++I V+ + F SA +PYA+ Sbjct: 347 DEAERVARSIADLLRQGR--RPQEIAVLYRSR-----HMSRAFESALRHARIPYALRGAT 399 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 V+ ++ L + ++ + + + +VP + Sbjct: 400 GFFDRAVVRDALAYLRVINNPADTLSLNRIANVPPRGLGANSLVT--------------- 444 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 L +A + +++ + + L ++ Sbjct: 445 ----------------------------LSAFAGQRGLTLADALIHPEALALLPSKAAEG 476 Query: 564 LASLLMQLNIWRRGLAQERPLEEWL-PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L L WRR + L V +L + Q + Sbjct: 477 ARQLAALLTRWRRLAESALSPDHLLADVLERTGYQAWLEQRLEPENVPDARAHLQELANA 536 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 L+ E+A + + V + T+ + + + +V ++G+ + Sbjct: 537 AAD-----HTALNAFLQEVALLTSADDNDEE--RDRVQLSTIHAAKGLEWPIVFVVGLEE 589 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 GV P + + D++R L AL A ++LY+S+ ++ Sbjct: 590 GVLPHEHS------------LVTPEGVDEERRLCYVALTRAGEQLYLSWAASRVR-GKLA 636 Query: 743 FPSVLVQELIDYIGQSHYLPGDE 765 PS + ++ Y + + + Sbjct: 637 KPSRFLNDIEAYGRERARVKVER 659 >UniRef50_B4VQT2 UvrD/REP helicase subfamily n=6 Tax=Bacteria RepID=B4VQT2_9CYAN Length = 1139 Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 59/512 (11%), Positives = 138/512 (26%), Gaps = 76/512 (14%) Query: 267 HSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL---ASWGKLGRDYIYLLSDLESSQEL 323 E ++ + L + N +L + + D+ LL Q+ Sbjct: 625 TEVEIEQVWQDEYEGDVYDLEVDVAHTYIANRMLVHNSIYSFRMADFTILLGFQ---QDF 681 Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCH 380 + + + ++ + EN A + E RP L I H Sbjct: 682 GDGLPDETTHTMVKLEENYRSRENILQAANYLIEQNTQRIDKILRPTRGLGEVIYCHHAD 741 Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 E + ++L + +++P L ++ P A R +PY I Sbjct: 742 DELEEAHFVVQQILKLNQQNPELGWGSFAILYRTNAQSRP-----LEDALRGR-VPYVII 795 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 ++ ++ L + + +L +++ P R I + + L E Sbjct: 796 GGLKFYDRKEVKDALAYLRTIANPSDTVSLLRIINTP----RRGIGKATIDNLVLAAQEL 851 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 G W+ + + + Sbjct: 852 GTP---------------------------------------LWEIIRDETSVNTIAGRS 872 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 + + + + + E + + + + Sbjct: 873 AKAVNRFAQLIKQCQENTENLKAV-EIIKFIMEESGYTDDLKNQGTDEAENRLANIHELY 931 Query: 621 AEGLGA-QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 + + + L L + + V++ TL + + F VV L+G Sbjct: 932 NAIVQFQEENEDTSLEGFLA--NASLASDLDNLEDGQQAVSLMTLHSAKGLEFPVVFLVG 989 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 + G++P D +++R L + AQ++L++++ Sbjct: 990 LEQGLFPHNRTID------------DPVALEEERRLCYVGITRAQEQLFLAHARERRLYG 1037 Query: 740 --SERFPSVLVQELIDYIGQSHYLPGDEALNC 769 S + EL + + S + + Sbjct: 1038 YREPAVRSQFLDELPEDLISSTLVKVKQQTPP 1069 >UniRef50_B9AD93 Putative uncharacterized protein n=2 Tax=Methanobrevibacter smithii RepID=B9AD93_METSM Length = 994 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 92/1035 (8%), Positives = 244/1035 (23%), Gaps = 189/1035 (18%) Query: 7 SNRLDVLEAL---MEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK--FGIAANID 61 S + V+ + ++ +++ + A L+ LS+ I + Sbjct: 26 SGKTRVIIERVKFLINELKVNP-----SSLLVITFTRKAANELKDRLSEDIPKNIIDEMQ 80 Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 SF D + + + + +L + +F YL D Sbjct: 81 ISTIHSFCLDFLKKRGNVTNLIDDDSGEKRRLFIQKYKYKLGFKNEF-----YLAD---- 131 Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 +Q+ S + FD+Y ++ D L++Y Q Sbjct: 132 ---YQIPSVI-NKFDEYTTFKVDI------------------------DGLIDYIKQTRP 163 Query: 182 PRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 + F + P Y++ L+ L + Sbjct: 164 IDKEYVDFVNSFKFFPSKKVRENEKFKKSWYNARFLQTPKAYVKYLELLDLFNAVDYNTV 223 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLL 300 + T+ ++ + +E L + VG+ Sbjct: 224 QIK-------FLESLKENPETQYTNILVDEFQDTDPVQAEIFEILLKNAESFTAVGDVDQ 276 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI----E 356 + + G + + + + L ++ + N Sbjct: 277 SIYSFRG-SFRDYFEEFYNKY----------NAELISLNYNYRSTNNIIRTSEAFIKPQR 325 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + D + PQ E + + + + + + D+ ++ I Sbjct: 326 KEYSKKYLVGARNEDKASYILESLDPQEEAQKIFNLIKDLKDNGKIRQYSDVAILYRSIV 385 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 S + Y IS +++ ++L + ++ L+ Sbjct: 386 SNKNI--PFLIDEFKKNDISYHISGTEDLIESDEVKSILTLFYYIARKLDYSYGMSNLEK 443 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIR----WGIDDDNVRELELPATGQHTWRFGLTRML 532 L R + + R+ E+ +++V + E + T + Sbjct: 444 EWLNLRAFCGIDFIPKFRKLSVETKRYLMELQENFENDVLKTEKEVYFELTGKKSRKNKF 503 Query: 533 LGYAMESAQGEWQSVLPYDE-SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW---- 587 G + + ++ L +L R + ++ Sbjct: 504 NGVFTRNEDVLIEIFKRVNKPVVDLDLIEDAGDREFFTELEKLRENVFSSDDEDKLTILE 563 Query: 588 ----LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 L + + + + E + + + + I D L + + Sbjct: 564 VYYELLNLCGYFDDLVINNGDYELELENLSKISRTIFNYESIISAKDVRGLFFFLTNVIE 623 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA------------- 690 V + T+ + + F V + +++ +P Sbjct: 624 GYGTSSSDV----DGVQLMTVHKAKGLEFPVTIVSSLSEYNFPLAPRDPMREKDNINKDD 679 Query: 691 ----PLGFDLMSQKPKRGDRSR-RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 P F + + + ++ + A+ AQ L +S +G+ ++ Sbjct: 680 TFYTPNKFLEYKDCSEADEVNLGLAEENRVIYVAMTRAQDILVLSVVGKMPEE------- 732 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 + + +Y ++ L + K +L Sbjct: 733 --ICRISNYFNKNLDLDNMSISSVGSKPEENKLNL------------------------- 765 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 + + P R +L ++ Sbjct: 766 ---------------------------SYSSFADYNNCPWRYNLLNKLHFKVSQKE---- 794 Query: 866 DTEPFILEGLSRYQINQQLL-----NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQ 920 I + L + ++ + +G E F + Sbjct: 795 --------VTKMGSIIHEALDVINQEIKDSGEISKENMEKIAKDTYYLHGGTDEEFDDYM 846 Query: 921 CQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSV----AQ 976 + + + + + G + + + + Sbjct: 847 DSIFDYYNEIGFDITVVDSEVPFSIDRDNYRFNGAIDLIYKNQNGEYGILDYKNTIFKDY 906 Query: 977 GMQLWLEHLVYCASG 991 + + + L+ Sbjct: 907 NREKYAQQLLTYILA 921 >UniRef50_D2SFF2 UvrD/REP helicase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SFF2_9ACTO Length = 1062 Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 118/905 (13%), Positives = 229/905 (25%), Gaps = 87/905 (9%) Query: 142 RPDWLAQWETGHLVEGL-------GEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFI 194 P L E LV L A W L AL + + Sbjct: 125 PPRLLTAAEQDALVAELLRGDLAGEGAVRWPESLLPALTTAGFRGELRELLLRATERGVD 184 Query: 195 ETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDI--- 251 L +A + G + + +A+ A +P I Sbjct: 185 AELLAAWSRETGNEAWLHAAAF----QEQYEAVTAFSTAGGGDASGYDPAELVRAAIAEL 240 Query: 252 -KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN-PLLASWGKLGRD 309 DPA L R R ++ + E L G+ V P A + G + Sbjct: 241 EDDPALLRAERERARWLFVDEYQDTDPAQVELLQLLAGGGGDLVVVGDPDQAVYTFRGAE 300 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLH--NIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 + + + +L +L++ R A + Sbjct: 301 PRGI-VEFPERFRTVSGRPAPRLSLGVCRRSGPALLDVSRRV-AEALPGPWEHRRLAAVE 358 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + + HV S E + D L D + + V+V + P Sbjct: 359 GAEEGAAEVHVFGSASVEAAYVADTLRRAHLVD-GVPWSGMAVVVRTALAIGP-----LR 412 Query: 428 SAPADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP-----VLAA 481 A +P + +D + P + ++ L R +E LD P + +A Sbjct: 413 RALTSAGVPVEVGTDDLPLAAQPAVAPLLAALGALLPRPGAEPGTLALDEPGAEALLTSA 472 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 T LR LR+ V + R G+D D A L + A A Sbjct: 473 LGGATVLDLRRLRRAVRIAQARRGVDADERGAPLATALTDEGLLEELPDAVARPARRVAD 532 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 + ++ + W A + Sbjct: 533 VLAAGRVALARDGSAE--------------DVLWAMWQRSGLAGRWARASAAGGAAGAVA 578 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL--AQRLDQERISQRFLAGPV 659 D + ++ A + + + L + + V Sbjct: 579 DRD-------LDAVVALFDAAAGFVDRLPSATVGAFVEHLSAQELPGVGGAGRESATDAV 631 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR----------SRR 709 + T + + + VVC+ G+ +G++P +R Sbjct: 632 RLLTAHASKGLEWDVVCVAGVQEGIWPDLRDRGTLLGTEVLVERVAGIDGAVLDRRVQML 691 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQD-NSERFPSVLVQELIDYIGQSHYLPGDEALN 768 ++R LF A A+++L ++ + ++ ++ S + ++ L Sbjct: 692 AEERRLFYVACTRARRRLVVTAVEGALDGPDAGATASRFLDLVVPPPDDGRPLTPLPRSL 751 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA---REWLPAASQAGKAHSEFVQPLP 825 + P R+ PA S+ +P Sbjct: 752 TLPALVAELRRAVSDPQTEPARRSAAAAVLRRLADEGVPGASPADWWGLAPLSDDAPLVP 811 Query: 826 FTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL 885 V ++ F P++ L + + + Sbjct: 812 DGEAVRVRPSAIETFQRCPLKW----VLGAVGAEASPDAT---------RTVGSAVHAVA 858 Query: 886 NALVE---QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP--GQS 940 + E A DL G + + + A + Sbjct: 859 QQVAEGLPAAGAPAALAEELDQLDLGPGWADQRQRIAARDMLDRFLRWHAANGRELLAAE 918 Query: 941 MEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFL 1000 + D+ +I G + +++ DG R L + ++ A+ + Sbjct: 919 ADFDVTVGRARIRGQVDRLERDGAGRLVVIDLKTGRSAARDIDTHGQLAAYQVAVAAGAF 978 Query: 1001 RKDGE 1005 + GE Sbjct: 979 GEHGE 983 >UniRef50_A8M3F7 UvrD/REP helicase n=5 Tax=Actinomycetales RepID=A8M3F7_SALAI Length = 1162 Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 118/983 (12%), Positives = 219/983 (22%), Gaps = 182/983 (18%) Query: 171 ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQA---- 226 AL + H A RF ++S P RV+ AL ++ Sbjct: 193 ALAGELDEHLVEPDHLAGWTGRFFADVQSR-------PGRVYADVRRALTLQQIRLKLLP 245 Query: 227 -LQALGKHIEIHLLFTNPCRYYWGDIKDPA---YLAKLLTRQRRHSFEDRELPLFRDSEN 282 ++A + + R R ++ + Sbjct: 246 LVRAYARRKRDFEAMDFADQLARAARVARDHPVVGEIERDRYRVVLLDEYQDTSHAQVVL 305 Query: 283 AGQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFV-DVTPDNLLHNIQS 340 LF VG+P + +G G L D V + Sbjct: 306 LNALFGGGHPVTAVGDPCQSIYGWRGASAGTLDRFPTEFARADGVPAQVRTLTTSWRNRP 365 Query: 341 DILELENRAVAGVNIEEFSRS------------DNKRPLDPLDSSITFHVCHSPQREVEV 388 ++L + N + ++ P ++ + + E E Sbjct: 366 EVLGVANALATPLRAAGARVPELHAALSVKEPIPHRTPRGSAAGTVHCALLDTYADEAEW 425 Query: 389 LHDRLLAMLEEDPTLT-----------PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 + D LL + V+V SA R LP Sbjct: 426 IADSLLRAWQGAAGAPGAVPEHLPVAARPTTAVLVRLRSQI-----PAIESALRARGLPV 480 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 + P + + L + +L L + AR+ I L L + Sbjct: 481 DVVGLGGLLDTPEVRDVVCTLRVLADPTDGAALLRL----LTGARWRIGPRDLVALHRRA 536 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 +P +++ + Sbjct: 537 RAIAAARRKLTAGDEPEIVPD------------------ALDEATLVEALADLGPAPAYS 578 Query: 558 AELVGHLASLLMQLNIWRRGLAQ--ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 AE + +L + R L Q + + + + L Sbjct: 579 AEGYARFRAAAQELGLLRYRLDQSLPDLIADVERTIGLDVEVAVRAGRDGAGDAGLARGH 638 Query: 616 WQAIIAEGLGAQYGDA-VPLSLLRDELAQRLDQERI----SQRFLAGPVNICTLMPMRSI 670 A+ LS LA D+ER + G V + T + + Sbjct: 639 LDALGDVAARFSGETPGATLSAFLAYLAAAEDEERGLAPGEVEVVEGAVQVLTAHAAKGL 698 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDL---------------------------------- 696 + VV + G++ GV+P + L Sbjct: 699 EWDVVAVAGLSRGVWPGPVRNSDHWLGGLGVLPFPLRGDADGLPVLELAEAGEQRGVAQA 758 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 ++ ++R L A+ ++ L S R PS L++++ Sbjct: 759 LADFTAAWRAHDEREERRLAYVAVTRPRRLLLCSGYWWGEGTKRARGPSALLRDVHGACL 818 Query: 757 QSHYLPGDEALNCDESEARVKAH----LTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 + + + + V L P + E + R +L Sbjct: 819 DAGAGLVVDEWAAEPAPDAVNPTTEVVLRAEWPADPLGDRRPALAEAATLVRRFLTDGDP 878 Query: 813 A--------------------------------------GKAHSEFVQPLPFTLPETVPL 834 + P+ LP + + Sbjct: 879 TTRAATGAVATAAPGDDDAEDDDPEVVRWRREADLLLAERAELTRHAGPVEVALPAALSV 938 Query: 835 ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDA 894 L P L+ TE + R L Sbjct: 939 TQLVALRRDPAA--LARSLRRPLPTEPNPY----------ARRGTAFHAWLEQRFGAGRL 986 Query: 895 ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITG 954 + AA + + L + GV + G Sbjct: 987 LDVDELPGAADADAAPDEALAELQE-----RFLHSEWADRTPVEAEVPFATVIAGVVVRG 1041 Query: 955 WLPQVQPDGLLRWRPSLLSVAQ----------GMQLWLEHLVYCASGGNGESRL-----F 999 + V R+ + +QL + L + G R+ + Sbjct: 1042 RMDAVFGRPGGRFDVVDWKTGRQPAGPAAAAAAVQLAVYRLAWAELAGVPVERVGAAFHY 1101 Query: 1000 LRKDGEWRFPPLAAEQALHYLSQ 1022 +R R L L L + Sbjct: 1102 VRDGATVRPVDLLDVAGLTALIE 1124 >UniRef50_A7HBX8 UvrD/REP helicase n=7 Tax=Cystobacterineae RepID=A7HBX8_ANADF Length = 745 Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 63/547 (11%), Positives = 140/547 (25%), Gaps = 85/547 (15%) Query: 216 ISALPPVYLQALQALGKHIEIH-LLFTNPCRYYWGDIKDPAYLAKLL--TRQRRHSFEDR 272 L L+ + + + + W + + R R ++ Sbjct: 195 FVPLTDDVLRVARRYAERKHELNAMDFDDLLLNWKILLAEREAVRRAVAGRYRHVLVDEY 254 Query: 273 ELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTP 331 + + + VG+ + + G + +L F P Sbjct: 255 QDTNRLQGDVVDLVAGEHRNLCVVGDDAQSIYAFRGAHFANILE----------FEKRYP 304 Query: 332 DNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEV 388 D +++ + A A + + P + C Q++ Sbjct: 305 DARRYDLTVNYRSTPQILGLANASIAANVRQFEKELTSVRPDGTLPAVVPCREVQQQAAF 364 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 + R+L + D + +I V+ + A R +P+ + Sbjct: 365 VAQRVLEL--RDEGIPLPEIAVLYR-----AHHHAMEIQFELARRGIPFVVRSGVRFFEA 417 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 ++ ++ L + + L + + R Sbjct: 418 AHVKDVLAHLRFVRNPGDELALKRC-----LKITPGVGTATAEGVWNAFLARRQRG---- 468 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 G +L D +S + + L Sbjct: 469 --------------------------------AGTVDELLAPDVASHVPPKGRAGYRKLA 496 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 L R E P E V + + + +Q Y Sbjct: 497 ELLRALSRKPTAELPGEAIEKVIEGGYEDYLRAEFLNADSRVEDLRQLAEYAR-----GY 551 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 D L + + + + ++ + + ++ V ++ ++DG +P Sbjct: 552 EDTETFLAEISLLTELTAETVSEGGDPDEKMVLSSVHQAKGLEWRAVFVVWLSDGRFPSA 611 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER---FPS 745 DR +++R LF A A+ +LY++Y + + ER S Sbjct: 612 ------------QALKDRDGEEEERRLFYVACTRAKDELYLTYPILAAPRDRERVVMKAS 659 Query: 746 VLVQELI 752 V+EL Sbjct: 660 RFVEELP 666 >UniRef50_C3LBP3 ATP-dependent DNA helicase, UvrD/REP family n=82 Tax=Bacillus RepID=C3LBP3_BACAC Length = 688 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 60/611 (9%), Positives = 160/611 (26%), Gaps = 74/611 (12%) Query: 155 VEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFIC 214 ++ L Q L + + R L + L + Sbjct: 139 LKLLRSQGYNQQILANEKHKQIMIKKILKELRLKDAYDAETMLAMISLEKNKLNRPKDVK 198 Query: 215 GISALPPVYLQALQALGKHIEIHLLFTNP---CRYYWGDIKDPAYLAKLLTRQRRHSFED 271 + + + + + + + + Y+ + L +L R ++ Sbjct: 199 AKTPVEQEFKEVYERFEEVKQRYNYIDFDDILLETYYMLENNAPLLTQLQQRFHYIEVDE 258 Query: 272 RELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVT 330 + + E L + G+ A +G G + +LS F Sbjct: 259 FQDTSYAQYEIVKLLASPRNNLFIAGDDDQAIYGWRGASHQIILS----------FPKEF 308 Query: 331 PDNLLHNIQSDILELENRA---VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVE 387 + + + ++ + + + + + + E Sbjct: 309 DNTTIIALNTNYRSNPFIVGLGNEVIKLNQERFDKELYSVREEGVQPFYARPATTLDEAN 368 Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD-RRARQ 446 + + ++ +D ++ + +P+ ++ Sbjct: 369 QILQLIQEKVDSGE-RNYKDFCLLYRTHSVSRSLL-----DQLTIHKIPFIKHGASQSFY 422 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 H +++ + L L F E + +L + I+ Sbjct: 423 EHSLIKPVLDHLRLVIEPFRLESLSNILPTMYIGRDDCISF------------------- 463 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 + R Y +L + V Sbjct: 464 ---------------------IEREQWKYGEGRFPSLLHFLLLNPSLKPFQVKKVNERID 502 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 + + + L ++ L+E + L D + I+++ + E Sbjct: 503 FI----KFIKELEPKKALKEIIHGKGKYLEYLQSNDRSSFTMHKDIQEEMLEELMESANR 558 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 L + + + + + E + V++ ++ + + F V LLG +DG+ P Sbjct: 559 FTDIPAYLQFIDEAIQGQKEMEALKTMPQKDAVSLMSIHNAKGLEFPCVFLLGASDGILP 618 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 + + +++R L A+ A+++LYIS + S Sbjct: 619 HTSS----LKDANDRVTETSEALEEERRLLYVAITRAKEELYISSPQF--FRGKKLDISR 672 Query: 747 LVQELIDYIGQ 757 + + + + Sbjct: 673 FLYTVRKDLPE 683 >UniRef50_Q6AFN3 ATP-dependent DNA helicase n=4 Tax=Actinobacteria (class) RepID=Q6AFN3_LEIXX Length = 1125 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 108/846 (12%), Positives = 215/846 (25%), Gaps = 103/846 (12%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 P + R R ++ + + LF+ + VG+P + +G G L Sbjct: 290 PDVVDDYRRRYRVVLLDEYQDTSVVQTRLLSTLFSGEAVMAVGDPHQSIYGWRGASAANL 349 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL--- 370 D + + +L+ N VA + R + R Sbjct: 350 SRFATDFTGRPRRADEYVLSTSWRNPTRVLDAANILVAPLGAVSPVRVERLRARPGAVAG 409 Query: 371 ------DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 ++ E + R + P ++ I Sbjct: 410 ELACTFGQTVEEEAEAIAAWFAERIARR------DAEGTLPS-AAMLCRSIKKI-----E 457 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 VF +A + +P+ + PV+ +S L + +++ L + AR+ Sbjct: 458 VFTAALSRHRVPFHVLGLGGLLEQPVIADLVSALRVMHDPTAGSELIRL----LTGARWR 513 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 + + + LR+ W D+ + P R + +++ Sbjct: 514 VGPKDIAALRRVA-----SWLAGCDHRFQELEPDVRDR-LRRSVAGEESASLVDALDFVV 567 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 ++ + + S V + + QL+ R + L+ V +++ + E Sbjct: 568 EAPEGHRQLSAFSGSGVERMRAAGRQLDQLRSRAGLD-LLDLVTIVQQELRLDIEVAANE 626 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI---SQRFLAGPVNI 661 T + D L LA+ ++ + S+ G V I Sbjct: 627 TAQLGQASLDAFAE--QVASYLASDDRATLGSFLSWLAEAEKRDNLAPRSEDPEPGTVQI 684 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL------------------------- 696 T+ + + + VV + + +G P L Sbjct: 685 LTIHGSKGLEWDVVAVPRLVEGELPVPPQSRRGWLAFGQLPNEFRGDSAELPVLPWRTVE 744 Query: 697 --------MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 ++ RD+ R L A+ A++ L ++ S Q R P + Sbjct: 745 DQKALDGAIADFEAENLARHRDEQRRLVYVAVTRARESLLLTGSYWSTQS-RPRGPGAYL 803 Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP 808 +EL + E A T P + R Sbjct: 804 RELQG--AGLIAGDAFPPCDDPEDNPLAPASRTVSWPLDPLGARRRSVETAAEAVRSARA 861 Query: 809 AASQAGKAHSEFVQPLPFTLPETVPLETLQRF-WAHPVRAFFQMRLQVNFRTEDSEIPDT 867 + G ++ + L L P F P Sbjct: 862 RGAGDGGVYARDLDLLLAERARRPSESGLVELPARIPASRFKDYVSDPAGVASALRRPMP 921 Query: 868 EPFILEGLSRYQINQQLLNALVEQDD--AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 E + + + A+ L D Sbjct: 922 ERPY-RQTRLGTLFHRWVEERYGTVAGRADELDATAHELDDPAGEILEAERLADLQATFA 980 Query: 926 QLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQP--DGLLRWRPSLLSVAQGMQLW-- 981 A A +EI +A G + L V DG ++ + Sbjct: 981 --ASEWAARAPDEVELEIHIALAGQVVVCKLDAVYRIADGRHDYQIVDWKTGRAPHDVGD 1038 Query: 982 ----LEHLVYCASGGNGESRL----------FLRKDGEWRFPPLAAEQALHYLSQLIEGY 1027 L + + F+ D R L +E+ +L E + Sbjct: 1039 LDRKQLQLALYRLAFAQYAGIEPERIDAVFYFVADDAVVRPSRLYSER------ELAERW 1092 Query: 1028 REGMSA 1033 + ++ Sbjct: 1093 QAAVAE 1098 >UniRef50_A8Q3F1 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q3F1_MALGO Length = 876 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 76/641 (11%), Positives = 166/641 (25%), Gaps = 72/641 (11%) Query: 233 HIEIHLLFTNPCRYYWGDIKDPAYLAKLL-----------------TRQRRHSFEDRELP 275 E H Y + L ++ + Sbjct: 177 MHEEHTYVCRIYAEYESRLASHNALDFDDLLMYGVKLFREHPFLSLDHIEHVLVDEFQDT 236 Query: 276 LFRDSENA-GQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL 334 E + VG+P + + D +L + P Sbjct: 237 NAVQYELMCHMSAGNKCVSIVGDPDQSIYSWRHADVSHL----------ERMRTDFPGVQ 286 Query: 335 LHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHD 391 ++ + + A +++ ++ + + H E + Sbjct: 287 RVLLEQNFRSTPSILDAALSVMQQDKLRIQKGLYTSHAQGAPVVLRAFHDADEEARYIAL 346 Query: 392 RLLAMLEEDPTL-TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 +L ++ L T DI +++ P +A +PY I Sbjct: 347 EILRHVQCTGGLLTFADISILLRFNAQSRP-----LEAALQRHGIPYRILGGLRFFDRAE 401 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ------WVNESGIRW 504 ++ ++ L + ++ + VL +L+VP + L + E Sbjct: 402 IKDLLAYLVVTENPAYTPGVLRILNVPKRGIGTKSVQALLAAAQAEQVPLLTYLERVSPA 461 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 ++ + T + G ++ + Y+E + Sbjct: 462 AAYGMRPAVVKSVSQFVQTIQELRNAAENGSSVADLLHLVLKLTRYEEHLRPDPDFDSRW 521 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 ++ ++ + E + I+ Sbjct: 522 ENVQELVSFASSIDLPPQSPPSHHGEPVRKRARVSENRPEDANEFS-----VHNIVDNVH 576 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 + PLS + + + + V I T + + + VV L DG+ Sbjct: 577 ADEEVATTPLSAFLES-SALASDLGVQEGSPPAMVTISTCHAAKGLEWPVVFLPASEDGI 635 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS--IQDNSER 742 YP + + ++ L+ A+ AQ L +S+ R + + S R Sbjct: 636 YPFYRSTTPEERREERR-------------LYYVAMTRAQTNLILSWSHRRLVMSEWSSR 682 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDE----SEARVKAHLTCLHTRMPFDPQNYQPGE 798 S + L+ H + ++ + S A L + + P + Sbjct: 683 QLSPFLAPLVSKAHGGHVPLDKKPMSDESWSHVSPPFTHAWLGVTASILSRSPITLERLN 742 Query: 799 RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQR 839 + A A S G+ + +P P TL R Sbjct: 743 ELAEA----FATSPTGQQYRRISAQIPSGTPSAPWPSTLPR 779 >UniRef50_Q0EW02 DNA helicase II n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EW02_9PROT Length = 699 Score = 184 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 71/617 (11%), Positives = 161/617 (26%), Gaps = 94/617 (15%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSR----VFICGI 216 Q L K +++ + R H + L IE + A P+ V + G+ Sbjct: 109 DADDQKALVKRILKQA-NIPADRLHPSFLLGW-IEHCKHAGQTAEQAPACDWNGVDLRGL 166 Query: 217 SALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL 276 + L+ ++ L R + L R ++ + Sbjct: 167 YSTYQQQLRE-HERMDFSDLILNCVLLMREH------ADIAEALQRRFDHILVDEYQDTN 219 Query: 277 FRD-SENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLL 335 VG+ + +G G D ++L F + Sbjct: 220 PVQHEWLTLLCAGHRNLTVVGDDDQSIYGWRGADIRHILE----------FERIWSGAGT 269 Query: 336 HNIQSDILE---LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR 392 H ++ + + + A A ++ E + R + VC+ E + + Sbjct: 270 HRLEENYRSTGAILDLANAVISKNEDRHDKSLRATQEQGLLPQWQVCNDEYDEARQIGTQ 329 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 L A D +++ V+ ++ LPY I ++ Sbjct: 330 LQAW--RDAGYAWQEMAVLYRSNRQ-----SLALEQILREQGLPYRIVGGVGFFERLEIK 382 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 ++ +L + + ++ + + P + GI + Sbjct: 383 DALAYWALLNGCGDALQLMRICNRP---------------------KRGIGLKGQEQLAA 421 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 +L H W + +G + + +G + + L Sbjct: 422 QLSGSGLRAHEWLDLVAEGGVGGVAGKLAPLARLIASLRPQAGTLPD---------RGLM 472 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 + L+ + + + Sbjct: 473 ALLQESGYLDSLQAMGEL-----------------EAASRIDNIHTLQRYIELTMEQEIT 515 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 P+ + + +E V + +L + + F V L G+ +G+ P Q A Sbjct: 516 PIEFMDRAALLQSGEEAGRDDENEESVTLMSLHRAKGLEFDCVVLPGVEEGLLPHQRALD 575 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQE 750 + ++R L + A++ L ++ PS ++ Sbjct: 576 DG-----------EAGIAEERRLLYVGITRARRHLKLTTARVRRLFGETHYPLPSRFIKN 624 Query: 751 LIDYIGQSHYLPGDEAL 767 L + Q + Sbjct: 625 LPPSMLQQDTPVATASA 641 >UniRef50_B3DUG1 ATP-dependent DNA helicase UvrD/PcrA n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUG1_METI4 Length = 636 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 67/583 (11%), Positives = 167/583 (28%), Gaps = 108/583 (18%) Query: 186 RANLYQRFIETLESATTCPPGLPSR-----VFICGISALPPVYLQALQALGKHIEIHLLF 240 L + F + L +F I+ L Y + + L LLF Sbjct: 139 PEALLEVFSLVVNKVKPIWKTLEESFSHLAIFSDEITKLEYFYRERKKKLLVFDYDDLLF 198 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPL 299 + + L + ++ + ++ L +S VG+ Sbjct: 199 YTVKLF----QEKENILKFYQSYFEYILVDEYQDTSRIQADFIDLLGQSSQRVMVVGDDA 254 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR---AVAGVNIE 356 + + G + +L+ F P ++ NI+++ A A + Sbjct: 255 QSIYSWRGAEIENMLN----------FPKRYPSTVVINIKTNYRSTPEILALANAAIEGN 304 Query: 357 EFSRSDNKRPLDPLDSSI--TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 +F R I +C+S + +V+ + + ++ + +++ ++ Sbjct: 305 QFQFPKELRAARKSLQEIKPQLLLCYSTAVQSQVIAEFIEDFRKQ--GIEAKEMAILYR- 361 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 + F R +P+ I+ ++ + L + + + Sbjct: 362 ----AHFHALEMQLELTRRKIPFEITSGIRFFEQAHIKDICAFLRFFINPYDETAFKRI- 416 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + I + L L S + +L P + +W Sbjct: 417 ----VKMFNGIGPKTLSQLWAEYLASSGS-------IEKLRPPKAAEKSW---------- 455 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 S L +P ++ + + Sbjct: 456 ------------------------------MSWLDIHKELSSPGYAHQPSKQLERILHGV 485 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 E ++ + +++ + + ++ Sbjct: 486 YADHLKMLYECYQRRLEDIEELINFASLYNST--------EDFLAQISLLTGVDTVQEQ- 536 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 G V + T+ + + +KVV ++ + +G++P + + +++R Sbjct: 537 -RGGVRLSTIHQAKGLEWKVVFIIMLCEGLFPSNYS------------LNHPTLLEEERR 583 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYI 755 LF A A+ +L++ Y R +N + PS ++EL ++ Sbjct: 584 LFYVAATRAKDRLFLCYPARRSFNNRQSTYFPSRFLEELPKHL 626 >UniRef50_C7MBM6 DNA/RNA helicase, superfamily I n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MBM6_BRAFD Length = 1094 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 101/935 (10%), Positives = 218/935 (23%), Gaps = 112/935 (11%) Query: 144 DWLAQWETGHLVEGLGEAQ-AWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATT 202 + + W+ +E A L +L ++ Q H + Sbjct: 164 EIVEGWDDSLDLEASPATLTAALLSLTSSLADHLVTPAQLEAHLRQIRDHLAGIPLQVEG 223 Query: 203 CPPGLPSRVF-ICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKD---PAYLA 258 P V + G L L+ + + PA A Sbjct: 224 RRRTTPKDVAKVLGALESRLALLPLLERFAEIRAADSALDFADQVSLAARVAREVPAASA 283 Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSDL 317 R ++ + + LF VG+P A +G G L Sbjct: 284 LARRMHRVVLLDEFQDTSVAQLQMLTDLFGPGHAACAVGDPQQAIYGWRGASAASLAGFA 343 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN--KRPLDPLDSSIT 375 + + V + +L NR + + E + + + + Sbjct: 344 TAFAAPEQPVLQRTLSTSWRNDEAVLAAANRLASPLRSAETGVTIPELQPRPGAGEGACE 403 Query: 376 FHVCHSPQREVEVLHDRLLAMLE-EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + E + +L ++ P V+V + Sbjct: 404 ILEAADERAEALAIGRWILERRAEQEEDAPPASAAVLVRARRQIPALV-----DGLERSG 458 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 L A+ P + ++L + ++ L + R + L L Sbjct: 459 LAVAVVGLGGLLHRPEVADVRAVLECAHDPGRGDALMRL----LTGPRLRLGARDLAVLG 514 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 +W + G R D + + + + + + S Sbjct: 515 RWRDRLGARLRRDGETPG--GQDEAESVSLVDAVDDLPPEDWTDPSGR---------GLS 563 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 G E + + +L ++ + + D+ PD+ A + Sbjct: 564 GTGRERLLQVQQILREMRRLLPLPLPDLVTAATRLLDVDLALLESEPDSRALADLEAFRD 623 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR-FLAGPVNICTLMPMRSIPFK 673 A G + L + ++ L + V I T+ + + + Sbjct: 624 HAAAFDRTARRGGLGAYLDLLEISEDEEAGLAVTAAPEAAHDPAAVTIVTMHSAKGLEWD 683 Query: 674 VVCLLGMNDGVYPR--------------QLAPLGFD------------------------ 695 +V + G+ +G P ++ G+ Sbjct: 684 LVAVAGLTEGTVPSYDLRRAKTDEAGRVRVPADGWLGTLANAAVPTALRGDADTLPELAW 743 Query: 696 -----------LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 L+ + +DR L A+ A+++L ++ +S R Sbjct: 744 AEADTQVDAESLIQEFRFAQGEESLREDRRLMYVAVTRARRRLLLTSAAWRTGLSSARPR 803 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 S + E+ D + +S + R +A + + Sbjct: 804 SRYLTEVTDLVPESFRTVQEVPETNPLESERPQAQWPPRPGEPEQARARAAALLAEVAGQ 863 Query: 805 EWLPAASQAGKAHSE-------FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNF 857 + PA + + P P + + + P A L+ Sbjct: 864 DDAPADPELAELVRRAVVDLEQQAAPPMVHSPPRLSASQVVQQARSPQAAALD-LLRPLP 922 Query: 858 RTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFW 917 R + +R L + + L E Sbjct: 923 RRPSA-----------AAARGTAFHAWLESRYDSATLLDLEDVLDLEDTPADE--AETDH 969 Query: 918 ETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLR-----WRPSLL 972 + A + + + G + V D Sbjct: 970 RALREAFT--ASEWAERSPLVVEQPVHTRIGQIAVRGVIDAVFADPEGTDGSEGVIVVDW 1027 Query: 973 SVAQGMQLWL-----EHLVYCASGGNGESRLFLRK 1002 + + L + + L L + Sbjct: 1028 KTGRVPRPAQLRERALQLSLYRLAWHERTGLPLAR 1062 >UniRef50_D0BK92 Exonuclease RexB n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BK92_9LACT Length = 1189 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 122/1098 (11%), Positives = 301/1098 (27%), Gaps = 194/1098 (17%) Query: 6 HSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTG-------MAQWLQMTLSQKFGIAA 58 S ++ + + +++ + LV M Q + L Q A Sbjct: 11 TSAKVSQISRKIADWLKQSN----MNQVIYLVPDHIKFSAELEMIQQVGQLLQQPQNSYA 66 Query: 59 --NIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLT 116 + W P L + +L+ L+ Sbjct: 67 VTKMQVYSFKRLAWYFLRDHAALQR------------------PSLSKVGICMILQKILS 108 Query: 117 DDSDKRKLF-------QLSSKAADLFDQYLVYRPDWLA--QWETGHLVEGLGEAQAWQAP 167 + D+ LF + + + ++ + + W E + + Sbjct: 109 EYQDELVLFNKESRHKGFIERLSAVMQEFRLGGIEIEDFSGWFEQDSYEEIDQRLKEFGI 168 Query: 168 LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQAL 227 ++K ++Y Q + ++ L + + V I L + L+ + Sbjct: 169 IYKHYLDYLKQDFVQS-------EDLLKILAQEISLKDLSNTYVVIDQSYHLNAMELEVI 221 Query: 228 QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF 287 AL K +T D P Sbjct: 222 DALVKSCGGVEFYTTATT----DAFKPKEKL----------------------------- 248 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN 347 D L++ LL+ L + ++ +N ++ D LELE Sbjct: 249 -ESSLFDSNRQLVS----------RLLNWLMIDESKPVLKELNEENCAYH--PDFLELEQ 295 Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 + E S + R + + + ++E++ + +++ +D Sbjct: 296 YWLETSGGLETSSNRTSRKI----EDLQWTTYEDERQEIQETLATIKTLVDSGK-YRYQD 350 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 I ++ +++ +Q + + +PY + + HP+++ ++ ++ + Sbjct: 351 IQILSRNLEEQQTLLQPLLETY----QIPYFMDLSDTMEHHPLIQVLDAIFAIQKHFWRY 406 Query: 468 EDVLALLDV-----PVLAARFDITEEGLRYLRQWVNESGIR-------------WGIDDD 509 +++ LL P+ A + + LR + + G D Sbjct: 407 HNIMNLLRSEYCFWPLNRANLENKHDEEVTLRDALIHYRQKLDETETIILAQGYEGKDWI 466 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 + + +L+ + AQ + ++ E + V + Sbjct: 467 SRKTWNYQVENIDEDSLSSREVLVHQQLTQAQELREQIVSLLEPFYKKLDKVETTKEAIT 526 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 L + W +A + D +T + ++ ++ E + Sbjct: 527 LLYQLLEKIGVTEAFLYWRN------HAANIGDIQTARRQDQVWNEFLKLLEEYVYIFGD 580 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + + + L + + + + +R P KV +G++ GV PR Sbjct: 581 EPFDWEIFQLLLHTGFEHTHYNMAPSTLDQLTCTGIDSVRYSPKKVTFAIGLSQGVLPRM 640 Query: 689 LAPLGFDLMSQKPKRGDR------------SRRDDDRYLFLEALISAQQKLYISYIGRSI 736 G ++ + ++ + +LF + L SA +KLY+S Sbjct: 641 EEESGLMTDEEREYLLSKLDSGRFLHPTTIQKQSVEPFLFYKVLTSATEKLYLSMHHTD- 699 Query: 737 QDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH-----LTCLHTRMPFDP 791 ++ S V+ +++ + + E V H L + F Sbjct: 700 -KGAKLKSSSFVERILNQYEITTQDGNQKQQERFEQGEFVTIHELFTTLLQKLRQYKFSK 758 Query: 792 QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPL---------------ET 836 + P + + H+ + + +P Sbjct: 759 EEDIPSIWIALPHLLRQDKDFQQEYHTLVDSVFHLNIAKQLPKELAAELYGNHLYLSTSQ 818 Query: 837 LQRFWAHPVRAFFQMRLQVNFRTEDSEIPD-TEPFILEGLSRY-------QINQQLLNAL 888 ++ F+ P F Q L V R E + + E ++ +++ + ++A Sbjct: 819 VETFYKDPFSHFLQYGLNVRERREFELTAAGSGEYFHETFDQFIRKVHELKLDIRAIDAA 878 Query: 889 VEQDDAERLFRRFRAAGDL-------PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSM 941 + + +F + +T Q + ++ + Sbjct: 879 TTEKVLKEIFDSMNDDARFQILNATPRMNWTKVLLQDTIRQTLSAALLQLQQLQVTPWKT 938 Query: 942 EI----------DLACNGVQ---ITG---WLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL 985 E+ ++ N Q I G + ++ + + Sbjct: 939 EVVFGAKSDKKIEIPLNDTQSLFIRGKIDRIDLLETEKGYHLGIVDYKSSAQKFDINRLR 998 Query: 986 VYCASGGNGESRLFLRKD 1003 + L + ++ Sbjct: 999 YGIQL--QLLTYLSVARN 1014 >UniRef50_A7Z3H2 YjcD n=3 Tax=Bacillus RepID=A7Z3H2_BACA2 Length = 761 Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 52/506 (10%), Positives = 133/506 (26%), Gaps = 89/506 (17%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 P LA+ R ++ + + + + VG+ + + G Sbjct: 331 RPDILAQYQNRFSHILIDEFQDINPVQYNIMQMIASPENNLCCVGDDDQSIYAFRGSSPS 390 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 ++L F P + ++ + + + ++ ++ L + Sbjct: 391 FILD----------FQKDYPAAKTIYLTANYRSPHPIVSSAHAVVKKNKKRYEKTLSAVK 440 Query: 372 SSIT---FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + + + E ++ + ++ +P D V+ + + Sbjct: 441 DGVHNPVMFYPYDEEEEATMIVSDMKEKIQN--GASPDDFAVLYRTNSAGRAIYER---- 494 Query: 429 APADRYLPYAISDR-RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 +PY + S ++ ++ L + + V LL L T Sbjct: 495 -LHQSSIPYHADRGVQTFYSRRIVRQILAYLYASQNEDDPDAVKDLLPALFLKQSALQTL 553 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + L ++ +++ Sbjct: 554 KAL---------------------------------------------SITEDCTMIKAL 568 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + + + + +P+E + F + Sbjct: 569 TKLPDLKPFQIGKIKQIVPFFASIR-------TMKPVEAI--TFAESKMGFSEYLKKRGN 619 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 +E+ + + + + E + V + T+ Sbjct: 620 EGNKLEKGSDDLRD--VKVAAKKFKTIPDFLAHVDHMRAAENLK--TDENGVELLTIHRS 675 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F V +LG DG P D + ++GD + +++R L A+ A Q L Sbjct: 676 KGLEFNTVYILGAADGSIPH-------DFALETARQGDPAPLEEERRLLYVAMTRAMQHL 728 Query: 728 YISYIGRSIQDNSERFPSVLVQELID 753 Y+S S ++ L+ Sbjct: 729 YVSCPAYR--RGKTARSSRFLEPLLR 752 >UniRef50_B2IL96 UvrD/REP helicase n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IL96_BEII9 Length = 730 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 71/620 (11%), Positives = 158/620 (25%), Gaps = 112/620 (18%) Query: 173 VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRV-------------FICGISAL 219 + +P N +F + L S P + ++ + + + Sbjct: 194 EQDNESGPEPIKRMINQISKFKDLLLSPDEAPAYVQKKIAEANAIGEPIHPASLFNAARI 253 Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 +Y Q L+ LL P R ++D AY + R ++ + + Sbjct: 254 YALYQQRLRDQNSADFGDLLLW-PTRAL---LRDAAYRTRWARRFDCILADEYQDVNYAQ 309 Query: 280 SENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNI 338 + L VG+ A +G G D Y + F P + + Sbjct: 310 YQWLRALAFEHHRIFCVGDDDQAIYGWRGADITY----------IRRFTQDFPQASVIRL 359 Query: 339 QSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA 395 + + A A + + I E + + + Sbjct: 360 EENFRSTGAILASANAVIARDPHRLGKTLFTNKGYGQPIEVVAYRYCDGEAHGIVEEIKK 419 Query: 396 MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 + ++ ++ + F F +PY I ++ + Sbjct: 420 RHA--EGVDFAEMAILYRNN-----FFSRGFEECLVRAKIPYVIVGDVGFYQRAEIKDTL 472 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 + L + + + AL V + R ++ + Sbjct: 473 AFLRIATTPDDRQSDEALRRV-INEPRRGFGKKAMA------------------------ 507 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 +L A ++++ E++ L + + + Sbjct: 508 ---------------ILEEEANFRHLSLFRAI----ETATLSSACRKAGLMFVAAIEKVA 548 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 + L + L + D + A + ++ Sbjct: 549 KD--PSLTLADQLSLLLDATGYRAMLQASKAEDGKARLENISELLHLAGS--------FH 598 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 + L G + + TL + + F+ V L G DG++P + Sbjct: 599 DAHELLDHAALASSRPNENEEGRLKLMTLHKSKGLEFEHVFLPGWEDGIFPAGNSD---- 654 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 D++R L A+ A+++ I+Y PS + ++ Sbjct: 655 -------------LDEERRLAYVAITRAKRRAAITYCEYRR---GLADPSSFIADIPPQH 698 Query: 756 GQSHYLPGDEALNCDESEAR 775 +L D Sbjct: 699 RIEGWLRDDGLPPVQRERKA 718 >UniRef50_C4R3W4 DNA helicase and DNA-dependent ATPase n=1 Tax=Pichia pastoris GS115 RepID=C4R3W4_PICPG Length = 802 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 70/512 (13%), Positives = 149/512 (29%), Gaps = 48/512 (9%) Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFN-------SDGEQDVGNPLLASWGKLGR---D 309 LL + ++ + E L D VG+ + + + Sbjct: 237 LLKELKHVLVDEFQDTNKIQMELLYLLGQCTDDQNFEDNVTVVGDSDQSIYMFRNAVASN 296 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 + ++ ++ QE+ + + +IL + + + ++ Sbjct: 297 FENMIIHYQNCQEITLKENYRSTS-------NILNFSEQIMTQQKDRKQKSLRSQISHLN 349 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAM-LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + I + + +E + + + + L + DI +++ F V Sbjct: 350 IP--IVYVRTQNTFKEADHIASEVAKLGLMSGLLTSYNDIAILLRS-----SFQSRVIEQ 402 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + +PY + RA + + L + + +L L+ P + + Sbjct: 403 SLVTNRIPYEVVHGRAFWELKEIRVAMDYLRAIVNNSDNLAILRTLNFPP----RGVGNK 458 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L+ L + +++S + + G+ + + ++ S Sbjct: 459 TLQRLEELIDKSDCPVIETLEMAIHDKKNGFLNVKSESGVRQYID--ILKECGRLLDSTS 516 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 E+S + L ++ E L + LN F E + Sbjct: 517 LDCEASLEACFDQIVQLANLKEIKKTPETSKGTHDSENALKAVEENLNEFKRQLIEYKPI 576 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERISQRFLAGPVNICTLMPM 667 + I I AE LS D + + G V I T+ Sbjct: 577 IDQI------ITAEAGDTPLTTRDVLSSFLDSIDLYETSNNENKKDSKKGRVTISTIHGA 630 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + + VV + G DGV P + S + D+DR F AL A+ L Sbjct: 631 KGLEWPVVFIPGCTDGVIPSKWTLEDDGPDSS-------TNLDEDRRCFYVALTRAKSML 683 Query: 728 YISYIGRSI---QDNSERFPSVLVQELIDYIG 756 Y+S S ++ + Sbjct: 684 YLSSYKERSTPWSGEESNEVSCFLKPTLKMFQ 715 >UniRef50_B2A3D2 UvrD/REP helicase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A3D2_NATTJ Length = 754 Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats. Identities = 65/570 (11%), Positives = 150/570 (26%), Gaps = 110/570 (19%) Query: 212 FICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPA-YLAKLLTRQRRHSFE 270 +I I + Y + K + F + +++D + + +L + + Sbjct: 281 YIDEIDTIAQAYHKY-----KRHYNLMDFDDLLLVLRDNLRDNSTFRKQLSSELSYILVD 335 Query: 271 DRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV 329 + + +E L S VG+ + + G ++ +L F Sbjct: 336 EFQDTNVVQNEIVNLLGSQSRNITVVGDDFQSIYAFRGANWENIL----------LFPQN 385 Query: 330 TPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREV 386 PD L ++ + I + + + F +S + E Sbjct: 386 YPDAKLIKLEKNYRSHNKILKFANEIVDSAQIGYQKHLSSEFHEGTLPQFIKYYSQEEEA 445 Query: 387 EVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 E + +LA+ + + +D+ V+ + F + R +PY + Sbjct: 446 EAIVSEILAL--REQGFSYKDMAVLYR-----AGFHGNYIQAELLRRKIPYVVYGGIKFM 498 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 ++ +S L L + + L I + + + E R Sbjct: 499 ERKHVKDLVSYLRLTVNPIDAVSWNR-----FLKMIPGIGRVRASQIVEEITEQDGR--- 550 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 L + ++S+L E Sbjct: 551 --------------------------LNFNNFKGTSYYKSLLSLQEV------------- 571 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 + + + + + + Sbjct: 572 -------LLEAGKKGISPSNSVARIIEYYYPILEKQEVDASERKNDLEVLYHLSQNYSE- 623 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQR--------FLAGPVNICTLMPMRSIPFKVVCLL 678 L +L+ + Q + I T+ + + + V + Sbjct: 624 -------LEQFLADLSLEPPANKFQQETTPALNEAEDDDSLVISTIHSAKGLEWNTVFIP 676 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR-SIQ 737 + DG++P + D +++R LF A+ A++KLY+S + Sbjct: 677 HLLDGLFPSSKS------------LRDPFILEEERRLFYVAITRAKEKLYLSMPHQVVSY 724 Query: 738 DNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 + PS +++L D Sbjct: 725 NGYFIQPSRFLKDLDPACYHFQAFFQDNKE 754 >UniRef50_O66983 ATP-dependent DNA helicase REP n=3 Tax=Aquificaceae RepID=O66983_AQUAE Length = 669 Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 62/533 (11%), Positives = 146/533 (27%), Gaps = 92/533 (17%) Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWG 304 R + + K + ++ + E L + +G+P + Sbjct: 172 RELYNLLLVDEVREKYRNTFKYIMVDEYQDTNNIQYEILKLLA-NKNICAIGDPNQCIYE 230 Query: 305 KLGRDYIYLLSDLES--SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 +L +E + + ++ + IL + N + +E Sbjct: 231 WRDARPDNILRFIEDFNPKIIKLELNYRS-------REPILRVANAVLEASTLEWKDLIP 283 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 R + + E + ++ + E +DI V+V +I Sbjct: 284 KLRGVRGEGQKPYVRRFQDEEEEALWISRKIKELAGE---YELKDIAVLVR-----VGYI 335 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 VF +PY + ++ I+LL L + L Sbjct: 336 TDVFERTFFKAGIPYKVVGTIKFYERIEIKNLIALLRLIYNPSDEVAFKRL--TEFFVKG 393 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 F + + + W L L +A Sbjct: 394 FG-------------------------DKSFEVVKKNFKGNWFKALKESLKKLPKNAAIS 428 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 ++ + + L + + +++ + ++L F D Sbjct: 429 AYEFLKAVVPLYKNPEKYHEGLEAFVEKIDYY------------------ELLKEKFKKD 470 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNIC 662 E + +++ ++ A L L E+ + V I Sbjct: 471 YE--ERIENVKEFLSSLKDFYAKA-----YTLEDLLAEIT-----LTSEEEEEENAVKIL 518 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 T+ + + F VV L + +G+ P + + ++ + F A+ Sbjct: 519 TIHSAKGLEFPVVFLPRLEEGILPHHRSQESERELEEERRL------------FYVAITR 566 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 A+ L++SY + R PS + ++ ++ + + +E+ Sbjct: 567 AKDLLFMSYTKK-----ENRKPSRFLSDIPKHLLDLSAFKKKKKVAYEENLRP 614 >UniRef50_C4XGR7 ATP-dependent DNA helicase n=4 Tax=Desulfovibrio magneticus RS-1 RepID=C4XGR7_DESMR Length = 646 Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats. Identities = 55/508 (10%), Positives = 133/508 (26%), Gaps = 93/508 (18%) Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD---GEQDVGNPLLASWGKLGRDYIYLL 314 K ++ + L G+ + + G +L Sbjct: 221 EKYHDVYPHILVDEYQDTNPAQLAVLQALIAESGRGSFWACGDDWQSIYAFNGASIGNIL 280 Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA-GVNIEEFSRSDNKRPLDPLDSS 373 F + P + + A I+ R K + Sbjct: 281 R----------FKQIFPSAQEIVLNVNYRSTPAILAACQKLIDHNQRKIPKELIAHKPGG 330 Query: 374 ---ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 + + + E ++ + + + D+ V+ + F + + Sbjct: 331 NHDLFVIDTFNEEEEACLVANEIKHL-SVSDGTAYSDMAVLYR-----ANFQSEILQNVF 384 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 +P+ I + + + + L + +E L Sbjct: 385 VRADIPFYIDNGMSFYERREVRILLDYLRFIEDPDSVA-----------------GDEAL 427 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 + + N + G A ESA +Q++ Sbjct: 428 QRIINAPNRY-----------------------LGKKFMEQVAGVANESACSLYQALRTM 464 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 D S I ++ + + + + + P E + + + F+ D + + Sbjct: 465 DFDSPYIRR---NVHEFVRLMESFIQNEGEMGPAEVLAKLRQRLDYDRFVTDKDIPSPDN 521 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 ++ +S +A D+ V + T+ + + Sbjct: 522 QAVLNLNQLLQSAARYAS-----ISEFLTYVATVEDETCSR---DPSGVKLMTIHKAKGL 573 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 F VV ++G+ +G+ P R +++R + AL A +LY++ Sbjct: 574 EFPVVFVVGLVEGIMP-----------------TKRGDLEEERRICFVALSRAMDRLYVT 616 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQS 758 Y + S+ + E+ + Sbjct: 617 YSHNYL--GQPAKRSIFIDEMTGDLAAH 642 >UniRef50_B1C9D7 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9D7_9FIRM Length = 1111 Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 114/1079 (10%), Positives = 287/1079 (26%), Gaps = 218/1079 (20%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGM---AQWLQMTLSQKFGIA 57 M+++ S + + E + LV + L LS K I Sbjct: 1 MIKIILSYIEEKAFFKASKDIRNELENQNVNKIFFLVPEQFTVEAERMLTDKLSAKGLI- 59 Query: 58 ANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD 117 +I+ + + E+P P L + +++ L Sbjct: 60 -DIEVLSIKRLTNRILSKTRSEMP------------------PVLDDSGKSMIIKVILNK 100 Query: 118 DSDKRKLFQ-------LSSKAADLFDQY---LVYRPDW-LAQWETGHLVEGLGEAQAWQA 166 ++ F+ + ++LF + V D + + + + Sbjct: 101 LKNELTCFKSLTNKASFNENLSELFSELKKSNVASEDLNPDNFNNKNEEDYFYKKSLDIH 160 Query: 167 PLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQA 226 ++KA ++ ++ + ++ G Sbjct: 161 KIYKAYNDFLSDDFIDFDDITLYASSVLDNVRFLDNTG------IYYFGFEGFDRNVYSL 214 Query: 227 LQALGKH-IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQ 285 ++A+ K I LFT + Sbjct: 215 IEAISKKNINQTFLFTTNTKE---------------------------DTNNESYRIID- 246 Query: 286 LFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL 345 D +Y L L + + + ++ + Sbjct: 247 -----------------------DTLYKLKKLAENNDEEVVTEIDKE------------- 270 Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 + + + + S + + D ++I + EVE+ +L ++ ++ Sbjct: 271 DEKEKDIKFLADNIFSYDTKTFDDEINNIEIFKASTIYEEVEMTALNILKLI-KEENADF 329 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 +DI V+ +D D+Y I F + + + + + +L + +L++ + F Sbjct: 330 KDIQVLPSDYDTYKEIISETF----KKHNISFFLDNTTSIMDTNILRGILKILNIVEGNF 385 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 + D+++ L + ++ + + E GI+ + + + Sbjct: 386 KTHDIISFLKTGLTDL----SKTDIETFENYALEFGIKGTMWTADFKRNNPDNEYD---- 437 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 L Y E ++ + L + Sbjct: 438 -------LAYLNEKKDELMLPLITLRNDLKDKTSVKEITNIFYDFLEEF----------- 479 Query: 586 EWLPVCRDMLNAF-FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 ++N F + D E I + + + + LS L Sbjct: 480 GLYEKIITLVNKFKYKEDFENANKYAQIHNSIITALEQIYDFLGNEELSLSEYTKVLESG 539 Query: 645 LDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP-- 701 + +I VNI +L RS K + +LG+NDGV P + G +++ Sbjct: 540 FNALKIGIIPSTIDSVNIASLSRSRSSEIKYLFILGVNDGVLPSNFSNSGGIFSNKEKLK 599 Query: 702 --------KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 + ++ + D++RY ++ ++K+++SY + E PS ++ ++ D Sbjct: 600 AINEGINLRTTEQYKIDEERYFLTSVILKTEKKIFLSYPIT-GSNGDELLPSSIIFKIQD 658 Query: 754 YIGQSHYLPGDEALNCDESEARVKAHLTCLH-----------------TRMPFDPQNYQP 796 + + D+ N +++ + + + + Sbjct: 659 TMPKLKVKTLDK-NNFEDNLSLISNYEATFKYLLNNKLHKNSSYKVNTLWDTLYDLYKED 717 Query: 797 GERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV--PLETLQRFWAHPVRAFFQMRLQ 854 + + A S KA + + + + + L+ + P F L+ Sbjct: 718 DKGKYLIDIMNSALSFNNKAVIKNKKLIDEIYKGEIVTSISRLETYAKCPFSYFVSYALK 777 Query: 855 VNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLP------ 908 R ++ + I ++++ + + + ++ Sbjct: 778 PKERKKNE---------INKPDIGNILHEIISEFSRKIIDKEIKPENIEKAEVEKISFDI 828 Query: 909 ------------------YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG- 949 F + + + S E + Sbjct: 829 TSEIIDKYSSGKFKNIINSAYFKNKLLRNASYSLNTIISELNRSNFKITSTESKFSEENE 888 Query: 950 ------------VQITGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN 993 + I G + +V D + +++ + Sbjct: 889 GAIKIVTNKNHLMTIHGIIDRVDTYEDDKGRYVKVIDYKTGNATFDFIKSYYGISMQLP 947 >UniRef50_UPI0001C314BB UvrD/REP helicase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314BB Length = 1184 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 109/838 (13%), Positives = 214/838 (25%), Gaps = 124/838 (14%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 A+ R ++ + E ++ VG+ L + +G D L Sbjct: 329 EELRARYAERFVHVMVDEFQDTNPLQLELLERIAGE-RLFTVGDELQSIYGFRHADVE-L 386 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS-----RSDNKRPLD 368 + ++ILE N A A E F+ R + L Sbjct: 387 FRRRRKALAEHG--AAASLATNFRSHAEILETLNVAFAPRFGESFTPLVAGREERADALP 444 Query: 369 PLDSSITFHVCHSPQR---------------------EVEVLHDRLLAMLEEDPTLTPRD 407 + V E L R+ +L D D Sbjct: 445 VAGPRVELLVVDVRADWANAGLLPEGMAAPAPLWRVAEARALAARVRELL--DGGRRAGD 502 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 +++++ + V+ A D +P + R + + ++ L + + Sbjct: 503 VVLLLRATGDLA-----VYERALTDLAVPTYVIGGRGYWAQQQVRDLVAYLGVLANPRDG 557 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 + +LL P++ D + + W Sbjct: 558 VALQSLLASPLVGLSSDGLVQVV-----------------AAARASRREGEPPDPWWVLT 600 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 R LL + + + + R + Sbjct: 601 EGRELLARLAPDDAERVEELRAWLPAE--------------------RATAPRHSLESLL 640 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 V L + A ++ + E + D + EL L+ Sbjct: 641 DRVLDQTGYDVELLRLPSGARRLANVRKLMRLAREFEAEEGRDLRGFVDMVMELGGGLES 700 Query: 648 ERISQRFLA--------GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL---------- 689 R R V + T+ + + F VVC+ + G Sbjct: 701 SREQDRESEAPVEGEALDAVRLMTIHRAKGLEFPVVCVADLGRGSPAAGSDVVRVGRDGR 760 Query: 690 -----------APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 AP + R+ D++ L+ A+ A+++L +S + Sbjct: 761 VGIKLKTLDGSAPRPALAYRPIGEARARAESDEEARLYYVAMTRAREQLILSGAVPTEPW 820 Query: 739 NSERFPSVLVQELIDYIGQ---SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY- 794 + + + + P E +E + A+ P Sbjct: 821 PEPKLGAPAITWIGPAFVPEIARLAAPDGEPSGVVSNEGQAVAYSVVRPGAAALAPSLAG 880 Query: 795 ---QPGERQSYAREWLPAASQAGKAHSEFVQPLP----FTLPETVPLETLQRFWAHPVRA 847 G S+ARE PA +A T+ +L R Sbjct: 881 SEGDRGRVLSHARERTPAGRRAHVRARATRPIGDGGGTAPPVATLSYTSLADHARCGYRF 940 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNA----LVEQDDAERLFRRFRA 903 + + L++ D+ L +R I LL + DAE + R Sbjct: 941 YLERVLRLPPVD-DAPRGRGGRHGLAASTRGVIAHALLEQVDFVRAQPPDAELVRRAAVR 999 Query: 904 AGDLPYGAFGEIFWETQCQEMQ-QLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPD 962 AG P + + + L +R+ + R + A + + + G + + Sbjct: 1000 AGADPTAEELDEIRGLVVRFLASPLRERLASARDLRREQAFSFALDELPLVGVFDAIARE 1059 Query: 963 GL----LRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQA 1016 G + W+ L A + + + ++ E L A Sbjct: 1060 GNRTLIVDWKSDRLEGADPGETVARAYGLQRAAYALAALRDDAQEVEVVHCFLERPDA 1117 >UniRef50_Q2NK11 UvrD helicase n=2 Tax=Candidatus Phytoplasma asteris RepID=Q2NK11_AYWBP Length = 761 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 72/686 (10%), Positives = 185/686 (26%), Gaps = 98/686 (14%) Query: 114 YLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAP------ 167 YL + K L++K A L +Q + LA T V+ + E Q Sbjct: 42 YLAAGAGTGKTTTLTAKIAYLIEQKKLPSNQILALTFTNKAVKQMKEKL-DQMIGKEKTK 100 Query: 168 -----LWKALVEYTHQLGQPRWHRANL-------YQRFIETLESATTCPPGLPSRVFI-- 213 + +L + P + + L+ P RV I Sbjct: 101 GITICTFHSLGTQILRKFIPFLPFSYRNNFKILDDNDCKKILKDILKEMNIDPKRVKISE 160 Query: 214 --CGISAL----PPVYLQALQALGK------HIEIHLLFTNPCRYYWGDIKDPAYLAKLL 261 IS + P LQ + + + Y +++ + Sbjct: 161 LKKSISDIKRKHEPQNEDTLQHSTQKEKNYQREKKYEFEMPIKVKYQIFLQNNNLVDFDD 220 Query: 262 TRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ 321 H + + Q D QD L +++ + + Q Sbjct: 221 LILYTHQLLQENANVRVFYQQKFQYLLVDEFQDTDFFQYQILTLLAKEHQNIFVVGDPDQ 280 Query: 322 ELDAFVDVTPDN----------LLHNIQSDILELENRAVAGVNIEE----FSRSDNKRPL 367 + +F +N + ++ + +N + + N + Sbjct: 281 NIYSFRGARFENSQLFLNKFKPKIAFLEENYRSSKNILDKANLLIKYNKAHLFKKNLKST 340 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + + E + + ++ + + +D ++ + Sbjct: 341 KSGGEPVICKFFADYKEETRYIAKTIQNLVLQGV-YSYQDFTILYRTN-----ILGRPLE 394 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 +PY + + +++ F++ L+ + + +++ P + I Sbjct: 395 EKFLANNIPYQVFGGASFYQSKLVKDFLAYLNFIANPSQDFNFKRIINTP----KRGIGT 450 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L +L + E I D + T L +++ + + + Sbjct: 451 TSLLHLEKLAQEKKIT-LFDTLKYLDQTPIQPNAKTKLNELKKLITNLRQKLINDSFDCL 509 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 E + + +++ + + + Sbjct: 510 SDIITYIDEKIEYCRKN-----------DETCKMQSIKDSDSDLYYIEELKSVFMQAEKN 558 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 I ++ ++ + + ++ V + T+ + Sbjct: 559 LEGSIFEKLTQLLDQISLYNETNEQT-------------EQDSKNPSKNDRVKLSTIHKV 605 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F+VV + D + ++ D ++ R L A+ A++KL Sbjct: 606 KGLEFRVVFITAFED-----------IFFDCNQKEKSD---LEESRRLAYVAVTRAEEKL 651 Query: 728 YISYIGRSIQDNSER--FPSVLVQEL 751 +++ + + PS +QE+ Sbjct: 652 FLTGAYQRFSYGKQIDSQPSRFLQEM 677 >UniRef50_C1RHS2 Exonuclease V gamma subunit n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RHS2_9CELL Length = 543 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 112/516 (21%), Positives = 192/516 (37%), Gaps = 43/516 (8%) Query: 631 AVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA 690 + L + L RL F G + +C+L PMR++P +VVCLLG++DG +PR A Sbjct: 34 PLRLPDVVALLEPRLGGRPTRAGFRTGALTVCSLEPMRAVPHRVVCLLGLDDGAFPRAGA 93 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 P G D++++ P G+R RR +DR LFL+A+ +A L + + G + + R P+V V E Sbjct: 94 PDGDDVLARDPLVGERDRRAEDRQLFLDAVTAAGDHLVVVHSGADERTGAPRPPAVPVGE 153 Query: 751 LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 L+D + ++ + L H D +N+ PG Sbjct: 154 LLDAVDEAVAFAD---------GRTSRGALVVHHPLQTVDERNFAPGALGRPGPFSFDVV 204 Query: 811 SQAGKAHSEFVQP---------LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 + + + LP V L+ L HPVRAF + RL V E Sbjct: 205 DRDAATVARGPRHPRPPLLTAPLPPLDDPVVDLDDLVAALEHPVRAFVRRRLGVLVPGEV 264 Query: 862 SEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAF-GEIFWETQ 920 ++ D P L L + +LL A+++ D R R G +P G G + Sbjct: 265 DDLDDRLPLTLAPLDGWAAGDRLLAAVLDGVDLTRAAAAERRRGRVPPGNLGGAALADVA 324 Query: 921 CQEMQQLADRVIACRQPGQSMEIDLAC-NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ 979 + P ++++ + +TG +P V D L+R + L ++ Sbjct: 325 TRVAAVAEAAAPVLGAPATTVDVTVPLPGDRTLTGTVPGVHGDVLVRAVYARLGAKHRLR 384 Query: 980 LWLEHLVYCA--SGGNGESRLFLRK-------DGEWRFPPLAAEQALHYLSQLIEGYREG 1030 W+ L A G + + P + A L++L+ Sbjct: 385 AWVRLLALAADPDGPPVRGAATVGRGPGTRPTAATSWLTPPEPDDARRLLAELVTVRDRA 444 Query: 1031 MSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGD---- 1086 + APL + + G + + + A D Q R ++ E +++ G+G Sbjct: 445 LCAPLPLPVAAAGTYAHRRHGNDDPAGALAD-AEQALRDRYEHTDEYHVLAWGDGFTLAA 503 Query: 1087 -----DIWYQRLWRQLTPETMEAIVEQSQRFLLPLF 1117 + W ++ L Sbjct: 504 VAGEPTPADRAAWPDEPTLL----GALARTVWDALL 535 >UniRef50_A6RX56 Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A6RX56_BOTFB Length = 999 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 63/634 (9%), Positives = 172/634 (27%), Gaps = 77/634 (12%) Query: 246 YYWGDIKDPAYLAKLLT----RQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLL 300 Y + L +L ++ + + S VG+P Sbjct: 188 DYDDLLVRCVELLRLYPSCVANIEAVLIDEFQDTNLVQFDLMRLFAVSQKRITIVGDPDQ 247 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 + + + + PD + +++ + + +N+ E Sbjct: 248 SIYSFRAAEIKNYKRMITQ----------YPDTVTISLEENYRSSGAILLTALNVIEQDS 297 Query: 361 SDNKRPLDPL---DSSITFHVCHSPQREVEVLHDRLLAMLE-EDPTLTPRDIIVMVADID 416 S + L P + + Q+E + + + ++ L D +++ Sbjct: 298 SRIAKSLLPTHVVGTRPVLRKLATAQKEADWIIQEIQRIMGMTGDLLDLNDFAILIRSSA 357 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + + S+ + Y + ++ + L + + ++ + +++ Sbjct: 358 -----LSRIIESSLGKAGIAYRMVGGLRFYDRIEIKTLLDYLRVINLPDHNDALARIINT 412 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P I E ++ L + +S + + ++ ++ + + R L + Sbjct: 413 P----SRRIGEVTIKALLEEAEQS--KLTLWSLILKSVQGRRATKTKLTASVERNLSVFV 466 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ--LNIWRRGLAQERPLEEWLPVCRDM 594 + + S +V + ++ + W + +W D Sbjct: 467 ----DIILTGMKKVADPSNTENSIVKIMEFIIEKTSYETWLEEHRGDITKAQW-----DN 517 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 + + + ++ + +++ Q + LS +A + + + Sbjct: 518 VKELMTQATDFQELISNGYED-ESLPQIDGLKQEDASDSLSRFLANVALASEVTKEEDKT 576 Query: 655 L-AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 V I T+ + + + +V + G G P A D++R Sbjct: 577 NNTPQVTISTIHAAKGLEWPIVFIPGAYQGSIPHSRAEDT----------------DEER 620 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV-----------------QELIDYIG 756 L A+ A+ L +S ++ + + + Sbjct: 621 RLLYVAMTRAKALLNMSCPLKNSLQ-ELTTTCPFLSARGLRAHLDYKGPSLRSNTVQCLA 679 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 Q P + ES A ++ + P + + + S + K Sbjct: 680 QILRRPFPSRESIAESSACLERIEDTYYPLEPENDKEDESKWIVSNGNPNFTMGQRPAKR 739 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQ 850 + + V T R Sbjct: 740 RRADIADQAGNISSVVYNNTPMTTMERASRFTLS 773 >UniRef50_Q9K8M6 ATP-dependent nuclease subunit A n=1 Tax=Bacillus halodurans RepID=Q9K8M6_BACHD Length = 1129 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 102/888 (11%), Positives = 245/888 (27%), Gaps = 170/888 (19%) Query: 212 FICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFED 271 FI + Y + Q L L C D++ + + ++ Sbjct: 328 FIDLLQYFAARYKERKQLLSAFDFSDLQRNAVCLLDQEDVQKS-----CHDQFKHMMVDE 382 Query: 272 RELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY------IYLLSDLESSQELDA 325 + + N + VG+ + + G D D + +Q ++ Sbjct: 383 FQDTNQMQM-DVLTKINPSYQFLVGDGKQSIYRFRGADVTLMNEMSEQARDEKEAQFIEM 441 Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQRE 385 + + + + + + V+ ++ S + P D ++ H+ + ++E Sbjct: 442 NTNYRTTAPVIHAVNGLFAHAMKDVSVHSVPYASLIPAREPEKEDDIRVSLHITKTTEKE 501 Query: 386 -------VEVLHDRLLAMLEEDPTL----------TPRDIIVMVADIDSYSPFIQAVFGS 428 + DRLL M+ D+ +++ Sbjct: 502 KDNDQVPYHHIADRLLEMVRTGEPTVWNGESWRSPNWGDMAILIPVRTELL-----ALER 556 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A +D+ +PY + + F++LL D F + ALL P+ Sbjct: 557 ALSDKGIPYHVYGGVGFYERQEILDFVTLLRWLDRPFEELYLFALLRSPMFGLT------ 610 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L ++ S + W ++ Sbjct: 611 ---------------------------------------LDDLMFVKERFSDELTWFDIV 631 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET-EA 607 E + L AE + + L W RP+ + ++ + L + + Sbjct: 632 VDKEMASLFAERPVVTDAFVR-LRTWLDRWVPFRPVPSLIDHLYELFDQTGLKMSLFVQE 690 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF--LAGPVNICTLM 665 + + +I G + L D + +++E ++ V+I T+ Sbjct: 691 NGMQKVRNVEKLIDVMSGWKTNVLEELLQRFDLIQAEVEKEGEAEVEQVAGNVVHIMTVH 750 Query: 666 PMRSIPFKVVCLLGMN-----DGVYPRQLAPLGFDLMSQKPK-----------------R 703 + + F +VCL ++ D R +G L + + + Sbjct: 751 ASKGLEFPIVCLPQLDRVPQRDKGQVRYDREMGIVLRHEWEEDDGVVKLETPAFALVKEQ 810 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP-SVLVQELIDYIGQSHYLP 762 D + +++ LF A A+ L+++ E+ S + E+ + + + L Sbjct: 811 ADLATMAENKRLFYVAATRARDYLWMT--------GKEQPSTSSWLYEVEEALEEMPELR 862 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQ 822 + D + + P P+ + Sbjct: 863 SHLKIEEDVASHDRWEKDIQTYKVPPIVPRQPEL-------------------------- 896 Query: 823 PLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 + + + F PV + + L + + E ++ + Sbjct: 897 -------VPLSVTEMMTFIQDPVAYYERYILGIETSVQHEAKTKQEDSNIDPSKVGSLAH 949 Query: 883 QLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ--S 940 ++ + + AA D + + E + + + + Sbjct: 950 KVFELVDQGVTLAGSIEMTLAAHDWTQDE-RKHYEEHIQRLFRGVNQHSLQWFGEPVANE 1008 Query: 941 MEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL-------WLEHLVYCASGGN 993 + G +I G + ++ + + Q + + L A Sbjct: 1009 WAFSFSFEGAEIVGEIDKIVKNEN-EYHIIDFKTNQIRRSGAELLRFYEPQLALYAEAYE 1067 Query: 994 GE-------SRLFLRKDGEWRFPPLAA-----EQALHYLSQLIEGYRE 1029 + LF+ +D + L + ++ QL++ + Sbjct: 1068 QLCHVPVKSASLFVVRDQQQPLHSLTDRSNVIARVRKHVQQLVDLRKR 1115 >UniRef50_UPI000185BEF3 ATP-dependent DNA helicase n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BEF3 Length = 1164 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 115/1004 (11%), Positives = 234/1004 (23%), Gaps = 155/1004 (15%) Query: 144 DWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTC 203 W WET V + A + L ++E + + + + + Sbjct: 151 QWQLAWETARNVTEIDVDIA-PSTLASRIIELGSNIDSNLSSPQAIREETEAFISNIEQT 209 Query: 204 PPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYL------ 257 P I + + + L+ L ++ +G A Sbjct: 210 PQKGKREGLIGDLQGIVDKQRERLEILPLVEQVRARCNEENVATFGMQMARAARLATDFA 269 Query: 258 ---AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLL 314 + R + ++ + LF+ VG+P+ A +G G L Sbjct: 270 EVGEEERRRFKNIMLDEYQDTSHTQRLFLRALFSGGCVTAVGDPMQAIYGWRGATAEN-L 328 Query: 315 SDLESSQELDAFVDVTPDNLLHNIQS--DILELENRAVAGVNIEEFSRSDNKRPLDPLD- 371 + L + ++ +L+L N + + Sbjct: 329 VQFVNDFPRSDGQPAEKKQLTISWRNPQSVLQLANAVSDRAFAGQARTVEALDAGPKAGQ 388 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR-DIIVMVADIDSYSPFIQAVFGSAP 430 + + + EV + D + A L E + D ++V + ++ A Sbjct: 389 GEVQLAFTATGEEEVAYIADCMEAQLRECEAAGNKLDAAILVRTNAESAVYL-----DAL 443 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA---------- 480 ++R +P I P + S + + +D L LL P Sbjct: 444 SERGVPAIIVGLAGLLHLPEVMDITSAMKILVDPSSDQDALRLLLSPQFNLGAADVEALR 503 Query: 481 ----ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ---------HTWRFG 527 ++ L V E+ + + +L + H Sbjct: 504 TRVDQLAMAGKDELARKMGNVEETSDSSPLSQLARQYDKLVEDAEAASSAVGLGHAIADP 563 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 R G + E L ES E + +A L L RR + E Sbjct: 564 DIRFYDGTPLARGSVEKNGRLVCSESLNYTDEAMVRIAQLGASLRKLRRFSLNKPLPELV 623 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIE---QQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 + + + +A + + + ++ + L Sbjct: 624 EDIATEFGIRVEAAAGQYGSATAITRPTTAHLDRFVDIAATYSQNISDDVTGFLNYLEFA 683 Query: 645 LD----QERISQRFLAGPVNICTLMPMRSIP-------------FKVV-----------C 676 ++ ER V I T+ + + F V Sbjct: 684 VEHDDGLERAPMNMPENCVQIMTMHKSKGLEWETVAVPGITTSKFDKVDLSSWLTNSVQL 743 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDD------------------------ 712 G V P + + + + GD + D Sbjct: 744 PPGAITQVDPLTASAEPTE-DATRLAAGDWAPVADSVDSNAPELDISGADNQTDLNKVIK 802 Query: 713 --------------RYLFLEALISAQQKLYISYIGR-SIQDNSERFPSVLVQELIDYIGQ 757 + LF A+ + +KL ++ R + S + Sbjct: 803 AYKEELREVEREEKQRLFYVAMTRSAKKLIVTASRRPNPSLKHPTDVSADFGAIATQFSD 862 Query: 758 S-HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP-------- 808 E +++E + P D + Q A + Sbjct: 863 YVVSWTDGEDPEVEDTEVDLDCDTAVDGVVWPVDTLGNRRDSVQRAAESVMRYMGEDQDE 922 Query: 809 --------------AASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQ 854 + + +P ++ Q A PV F + + + Sbjct: 923 RPIAGDLSEVWETETTILVDEILRAKAAEIHLPMPTSMSTSEYQAMIADPVA-FARRKAR 981 Query: 855 VNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGA--- 911 + R L F D G Sbjct: 982 PVPFKPNRF-----------ARRGTAFHAWLENRFGAHSLLDDEDLFGDQLDDFLGTEQV 1030 Query: 912 FGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSL 971 E E + A + ++A ++ G + V D +W + Sbjct: 1031 ASERELEKLKANFE--ASEWADRTPTHVEVPFEIAIGQRRVVGRIDAVFND-NGKWSVTD 1087 Query: 972 LSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQ 1015 Q + + + ++ P E Sbjct: 1088 WKTGQMPRGKEREVAALQLAIYRLAWSDRLREMGMETAPEEIEA 1131 >UniRef50_Q67LG5 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67LG5_SYMTH Length = 671 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 68/506 (13%), Positives = 130/506 (25%), Gaps = 84/506 (16%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYI 311 P A L R ++ + L VG+ + + D Sbjct: 225 KPDIRADLQRRFTYLQVDEFQDTNVAQLHMVKLLAGKRQNVMAVGDDAQSIYSWRSADIR 284 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN---IEEFSRSDNKRPLD 368 +L F P ++ + A R Sbjct: 285 CILE----------FERHFPGARTILLEQNYRSTGAIIRAANRLIAHNAGQRPKRLFTAA 334 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 P + H + E + + R+ A + D ++ P F Sbjct: 335 PEGRPVVAHEAETEVDEAKWVVQRIRA--GAEAGRRWGDFAILYRTTAQGRP-----FEE 387 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + +PY + ++ ++ L L + S + +L+ P Sbjct: 388 ELREASIPYQVVGGPRFYDRREVQDSLAYLRLVHNPRDSVSLERVLNAP----------- 436 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 R GI + ++ LL A + ++ Sbjct: 437 --------------RRGIGERGLQR------------------LLALAAQRGVDLIAALR 464 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGL-AQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + L E L L R L Q + E Sbjct: 465 VAADEGVLQDEAAAGARQLHDHLRRAREALERQPGRFAAAMERLLRESGYLAYLQEEDRR 524 Query: 608 AMTLIEQQWQAIIAEGLGAQY-GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + +++IA + L D LA QE V + T+ Sbjct: 525 KEERRSEVVESLIAAMHEFERRSPDGGLGAYLDHLALLEGQED---ESGGDVVKLQTIHS 581 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + + VV ++GM G+ P + + +++R L A+ A+++ Sbjct: 582 AKGLEYPVVFVVGMEQGLLP-------------YQRALEEGNLEEERRLCYVAITRAREE 628 Query: 727 LYISYIGRSIQDNSE--RFPSVLVQE 750 LY++ Q PS + E Sbjct: 629 LYLTGARVRWQRGEMVLTTPSQFLSE 654 >UniRef50_B0SIS7 Exodeoxyribonuclease V, gamma subunit n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SIS7_LEPBA Length = 1099 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 141/920 (15%), Positives = 296/920 (32%), Gaps = 121/920 (13%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKF--GIAAN 59 + + L + + + +++E++++P +++V +T + WL++ + + ++ N Sbjct: 3 IHYFAGLHLHEITSELTKQIKKEQIENPLRMPLVVVPNTNLIPWLKLNIPKYNDSQLSIN 62 Query: 60 IDFPLPASFIWDMFVRVLPEIP---KESAFNKQSMSWKLMTLLPQLLER--EDFTLLRHY 114 I+F I M L ++ S L + ++ ++ Y Sbjct: 63 IEFTFLEKAILKMIFTSLQIPAWAESVEFYDYNSFKKDCFRYLYENQTSLFQNHPEIKTY 122 Query: 115 LTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 +++ KL+ LS F Y + R +W+ QW + + P W +E Sbjct: 123 ISELP---KLYYLSDLLTKYFKDYELNRSEWIHQWLGNEKSNIPNQLTSD--PYWD--LE 175 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 LG + NLY L + +S L Y+ L+ + K+ Sbjct: 176 KEIYLGTNDGGKKNLYYYL------NKGKDLSLQGNLHFFCLSNLSGTYINFLKTVSKNP 229 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 +L +N + N + Sbjct: 230 NANL---------------------------NIYIYQF-HNGKVIGQNPEKTKNYLSKFA 261 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 LA +++ L E +L ++S +LE V Sbjct: 262 KPQSYLA------KEFSNLTKQKE-------TSKYASGGMLAKLKSILLE------EQVK 302 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT-LTPRDIIVMVA 413 E + R + S RE+E + +L + L+ D ++V Sbjct: 303 EENYLNDQTVRVWN----------APSEYREMESIAHDILHKISTSKGNLSLLDFAILVP 352 Query: 414 DIDSYSPFIQAVFG----------SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 + + Y I+ VF P + L Y++SD A+++ + + F L + Sbjct: 353 NTNDYKAAIEWVFHGGIYTTQRIDETPTLQRLNYSLSDLVAKETSLLYKVFEILFQSFLN 412 Query: 464 -RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 R ++++ LL P++ + + + +D E + Sbjct: 413 KRIQKDELIHLLQNPLITGK--------NKIDSIDQTHSVIQLLDSLGSLYDENKEENPY 464 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS-LLMQLNIWRRGLAQE 581 T FG+ R +L + A + D + + L +L + L + + Sbjct: 465 TISFGVKRAVLSVMSDEATTWSHMGVITDPLAKEDSVLYLNLIWEEIKSLQSFFESEFLQ 524 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 P+ E + N F ETE + + ++ L Sbjct: 525 LPINERFKAFQTKWNQFLKFSEETENERIY----LTEWLGNIAKWCDTEWNHVTDFLQFL 580 Query: 642 AQRLDQE-----RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + ++ +L + I L PMR IPF + ++G+ +G +P F+L Sbjct: 581 QLQTEEIFSNIPTQKGNYLTEGITISLLQPMRPIPFSHIYIVGLGEGKFPGSKDVSRFNL 640 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 K D +R + L E ++SA+ + SY+G++ ++ E P + E++ +G Sbjct: 641 RKNDSKPWDLNRIEIQESLLWETILSAEDSITFSYVGKNTLEDKEFEPCSSLFEVMHSLG 700 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 + + + N + + E LP Sbjct: 701 IERATEIPLTPYSRFYDREILHSYDYSRNLKQYRSLNTDLPKPDFTSLEDLP-------- 752 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS 876 + + + + + ++ + +P+ + + L F ++ E EPF L Sbjct: 753 ----LPHSEWKFKKQISIASIASAFKNPILPYIKENLG--FMEDEEETSLEEPFYFNALE 806 Query: 877 RYQINQQLLNALVEQDDAER 896 + + L E E Sbjct: 807 TFLFKSKFLPLFTESLAKEE 826 >UniRef50_B7GLR0 Putative uncharacterized protein n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GLR0_ANOFW Length = 716 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 69/592 (11%), Positives = 163/592 (27%), Gaps = 90/592 (15%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 + K + G R Y ++ + L + Sbjct: 200 HERLIRDWQKEKMMKEIGRGIGIDERDFPYDEAMQRISYWKNTLTPLHAITIENEWDERV 259 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 + +A + +E Y D L + R ++ + Sbjct: 260 VQLYKQYEAKKQQLEWFDFDDMLYACYDMLRTDEKRLRQYHERFHYFLIDEFQDINSVQY 319 Query: 281 ENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQ 339 E L ++ VG+ A + G D + + F P+ + + Sbjct: 320 ETMKLLASHTHHICAVGDDDQAIYAFRGSDSSF----------IRQFQQDFPNTKIVKLT 369 Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSIT---FHVCHSPQREVEVLHDRLLAM 396 + I SR+ + ++ S+ + + E ++ + Sbjct: 370 ENYRSPHPIVSLANRIIAKSRTRIPKQMNAQTDSVHMPTLFFPYDEEEEATMIACDIEER 429 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 +++ + P DI V+ S AVF + ++P +D + + ++ +S Sbjct: 430 MKQ--GVHPSDIAVLCRTNASAR----AVFER-LSQLHIPV-TTDGDSFYNRRIVRYILS 481 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 L + + + V L Sbjct: 482 FFQLAIDPNDEQAMTDVATVLFLK------------------------------------ 505 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 + L A+ +++ D + + +A L ++ Sbjct: 506 ---------QAIMNDLKANAILQDCSLVEALAKLDGIPPFQKQKLRTIAPLFAKVKEM-- 554 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 + +++ L F A+ + + + Sbjct: 555 ---KPFDAIDFIEK-EMGLGEFLKKRGNEGNAIEKGSDDVRD-----VKVVARKFKTIQA 605 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + + + + + A V + T+ + + F +V ++G DG+ P D Sbjct: 606 FLSHVKRV---QAYANKTCADGVQLMTIHRSKGLEFPIVYIIGAVDGLLPH-------DY 655 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 + + GD + +++R L A+ A+Q+L+IS + S L+ Sbjct: 656 ALEAYRNGDVAPLEEERRLLYVAITRAKQRLFISVPSMRRL--KKANASRLL 705 >UniRef50_A7VD84 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7VD84_9CLOT Length = 672 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 58/545 (10%), Positives = 141/545 (25%), Gaps = 101/545 (18%) Query: 214 CGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRE 273 Y + L+A K +L D D + R + ++ + Sbjct: 161 DDFQITYREYDEILRANNKIDFDDMLVFTY--ELLRDRSDIRKM--WQQRFQYILIDEFQ 216 Query: 274 LPLFRDSEN-AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPD 332 + + L VG+ + +G G D +L F + P Sbjct: 217 DINWIQYQTVKLLLGKKQNIFAVGDDDQSVYGFRGADTKLML----------GFPNEFPG 266 Query: 333 NLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL-----DPLDSSITFHVCHSPQREVE 387 L + ++ + I + ++ K+ + + ++E + Sbjct: 267 TRLVYLNTNYRCSSAIVESACRIIKNNKERYKKAIHSAFEKSQCERVHVIEVDGMRQETD 326 Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA-RQ 446 + ++ M + +I V+ S +P+ + D Sbjct: 327 GIVQKIRKM--NQNGIPYSNIAVLYRTNSEPSGLAMK-----LMQSNIPFRVKDSIPDLM 379 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 SH V+ + + L +++ P ++ E L + Sbjct: 380 SHFVVVNILDYIKAALGNRERALFLRIINRP----NRYVSRESLETDPVDTERMKEFYRD 435 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 ++ V+ T L R+ + ++V + + + Sbjct: 436 NNRLVQ-------NMVTLEADLRRIAELKPYAAVNYIRKAVGYDEYLKEYASYRGINPQE 488 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 + + ++ EW + Sbjct: 489 YMDIADEFQEMARDADSFIEWFNFLNEY-------------------------------- 516 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 +L ++ + V + T+ + + F V ++ +G+ P Sbjct: 517 ---------------RIKLKEQMKTTDHTRDAVVLATMHGAKGLEFDQVFIMNAVEGMTP 561 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 + + + +++R +F A+ A+ LYI S Sbjct: 562 HKKSVAD-------------AELEEERRMFYVAVTRARYGLYIYVPKV--VYGKTARISR 606 Query: 747 LVQEL 751 V E+ Sbjct: 607 FVTEM 611 >UniRef50_C7RGF8 ATP-dependent nuclease subunit B-like protein n=2 Tax=Anaerococcus RepID=C7RGF8_ANAPD Length = 1121 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 116/1058 (10%), Positives = 276/1058 (26%), Gaps = 196/1058 (18%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIA--- 57 M+ S + + +E + + + +++V Q L I+ Sbjct: 1 MIETIISRYPKEMSTYIYKKIEEDLKNG--KKALLIVPEQYTLQTDINFL---KNISFEA 55 Query: 58 -ANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLT 116 + +S + ++ E K L+ + L Sbjct: 56 VMDAKVLSFSSLKSYIGEKIG--QANEKFLTKN----------------GKIILISNILQ 97 Query: 117 DDSDKRKLFQ-------LSSKAADLFD--QYLVYRPDWLAQWETGHLVEGLGEAQAWQAP 167 D +DK LFQ + + L + + D+ + E Sbjct: 98 DMNDKLSLFQNKYFNIEFVNNISSLISSIKDNNFDEDFFKKIEESDD-PITRIKFKEVKM 156 Query: 168 LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICG-ISALPPVYLQA 226 ++ A + + IE L L VF +L + L Sbjct: 157 IYDAYEKEISGKFIDSEDSLSY---IIERL----PHCDFLADTVFYFDKFDSLSELKLSF 209 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 ++ L N Y + Sbjct: 210 VEGLINRGNEVFFSLNLDTEY----------------------------------INSNI 235 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE 346 F+ D + L L+++ + + + L DI L Sbjct: 236 FSDLEFFDSTDKL-----------YRKLNEITRTHDTVL-----DNTSLAK--EDIGHLA 277 Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 N ++I F S + EVE + ++ ++ + Sbjct: 278 RNFE----------RFNPLKFGGSPNNIRFLENPSTKTEVENTARIINYLV-KEKGYRYK 326 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 D+ + ++ D Y I VF LP + R + +++ F+++L L F Sbjct: 327 DLAIYISSEDEYKNEIIKVFNRYD----LPIFMDSDRKLIDNHIVKTFLAILRLVIYNFN 382 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 S+D+ L + + + E+ + L ++ I+ + ++ + ++ Sbjct: 383 SQDLSYFLRSGLFSFSVNFEEKTI-ILENYIKNRKIKGKMFLEDKYFVYDEDFYKNLCEN 441 Query: 527 GLTRMLLGYAMESAQGEWQSVLP--YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 R A + D + L+ L + + R + Sbjct: 442 DPKREEKLGAKTYEYQVINELRDRILDLLNPLLELKEEKTRDLCIGIFNIIDDKDIRRGI 501 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 + + ++ + + ++ I+ E + + L + + Sbjct: 502 ASFQKILKE------SGRLDEYKENDQVWDKFVEILEEIVDLMGERSSSLRKVYSLIEAT 555 Query: 645 LDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 + + + I + R V +LG+ND +P +K K Sbjct: 556 CKDINVGIIPPSKDHIEITSFARARIADRGVNFILGLNDVFFPSTNREDLIVGKGEKDKL 615 Query: 704 G---------DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 D + ++ +F + + KL++SY + + S+++ +++ Sbjct: 616 RALDLDLKVFDEDFEEREKLVFYKLITI-SDKLFLSYSLANRKS-EAINKSIILNSIMNI 673 Query: 755 IGQSHYLP-----------GDEALNCDESEARVKAHLTCLHTRMPFDP--QNYQPGERQS 801 E + E R + + D + + Sbjct: 674 FSDREGKTYGMVYGNDLGLSIEKFSYKTMEVRALRSIRQMMRNENVDENDREIARAFIKY 733 Query: 802 YAREWLPAASQAGKAHSEFVQPLPFTLPETVP------LETLQRFWAHPVRAFFQMRLQV 855 + G + + L L ++ + ++ + P + F L+ Sbjct: 734 LKENDSYELIEKGLNFTNDKKNLREDLAGSLYKKNHFNVSEIESYSRCPYKYFVNYGLR- 792 Query: 856 NFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL-----------VEQDDAERLFRRFRAA 904 E + ++ + I +L + ++ D E + Sbjct: 793 --------PNIDESYEVDHMEVGNIVHKLFEDISRNLSEKNIEELKASDLEDILIENFKE 844 Query: 905 GDLPYGAFGEIF-----------WETQCQEMQQLADRVIACRQPGQSMEIDLA------- 946 L + + ++L D+V + ++E D Sbjct: 845 ATLRNLDKTRRENPRNKFILNNVLNSAKRNSEKLIDQVKSGDFKIYAVEKDFGYENEDNL 904 Query: 947 -----CNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ 979 + + G + ++ R Sbjct: 905 PKVYVDDKNYLRGRIDRIDK-AGNFVRIIDYKTGNKTF 941 >UniRef50_B8GJD7 UvrD/REP helicase n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GJD7_METPE Length = 921 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 101/830 (12%), Positives = 199/830 (23%), Gaps = 167/830 (20%) Query: 223 YLQALQALGKHIEIHLLFTNPCRYYWGDIK-DPAYLAKLLTRQRRHSFEDRELPLFRDSE 281 Y L L + ++ FT +Y ++ DPA LA+ R R ++ + E Sbjct: 174 YRAYLDHL--QADHYIDFTGMIAHYVEALEEDPALLARERGRVRYLIVDEYQDINTLQEE 231 Query: 282 NAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS 340 + S VG+ + G +Y ++S PD IQ Sbjct: 232 LIRLMVGSTGNLSVVGDDDQCIYHWRGSNYENIISFGTR----------YPDVTTVRIQQ 281 Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDP--------LDSSITFHVCHSPQREVEVLHDR 392 + A + + + + ++P + I + EV + + Sbjct: 282 NFRSTPGIISAASRVIDRNELRLPKMMEPWPEGLGQTEEGDIATCFFDDEEEEVAGIVGQ 341 Query: 393 LLAMLEED--------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 + A+L + TL+ RD+ V++ + Y+ SA +P+ + R Sbjct: 342 IQALLGREYINNQGEERTLSYRDMAVLMRSVRVYA----RSLISALERAGIPFVVRGGR- 396 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 P + + L+ L L + G Sbjct: 397 LFERPEVVIVMQALAF--------------LGEYPYPLRSPVPVHLPLLEEAYLALGYGE 442 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 D +L L R + S Q + V+ G Sbjct: 443 AADCALFLKLMTD----------LKREIDRSESFSLQTLFHRVVQA--MGGDRTPFPEVW 490 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 L L+ + PL T + + Q + Sbjct: 491 YYNLGNLSQLVSAFEHQYPL-------------------ITTMEIHRFLEYIQEHAMKQA 531 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 L V + TL + + F VV + +N G Sbjct: 532 EEGGAGEELL---------------------PDAVTVTTLHKAKGLQFPVVFIPRLNTGE 570 Query: 685 YPRQLAPLG--FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 +P F + + +D+R LF + +++ L++S + D Sbjct: 571 FPSDRPDRAVWFVPSPLFDRDRYTTSLEDERRLFYVGITRSEKYLFLSGHRQRSGDLPPA 630 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 PS E + + + + Sbjct: 631 EPSTFFSEYPRDHVVDRFPCPAKGGETSHTATPISDRSPAR------------------- 671 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 L+ + P + + Sbjct: 672 ---------------------------IETSWSALRYYAHCPFDYKLRHLYGFDP--MPR 702 Query: 863 EIPDTEPFILEGLSRYQINQ-QLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC 921 E + L+ Q++ + + L P G + Sbjct: 703 EELGFGRAVHSVLA---AVHTQIVRGTFDPAEIPDLVDEHLLLRFAPAGTTERVQGIVAR 759 Query: 922 QEMQQLADRVIA-CRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLS------- 973 Q ++ + R G + A + G + + DG Sbjct: 760 QTLRYVEQNSHDFARIAGIELPFSFAVGNGVVNGAMDLMLGDGDGGVELRDFKLTEEGEA 819 Query: 974 ---VAQGMQLWLEHLVYCASG-GNGESRLFLRKDGEWRFPPLAAEQALHY 1019 QL + L + G ++ ++ G + Sbjct: 820 SFRPDVERQLQVYALAARSLGHEVHKATIYHFDTGSITEVAVGPAALAEA 869 >UniRef50_Q10213 ATP-dependent DNA helicase srs2 n=1 Tax=Schizosaccharomyces pombe RepID=SRS2_SCHPO Length = 887 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 51/483 (10%), Positives = 141/483 (29%), Gaps = 84/483 (17%) Query: 262 TRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYLLSDLESS 320 + ++ + L + VG+P + +G + L Sbjct: 230 RNIKHILIDEFQDTSKIQYFLVKLLALQNSDITIVGDPDQSIYGFRSAEIRNL------- 282 Query: 321 QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS---ITFH 377 + + + +++ + + ++I +S K+ L S + Sbjct: 283 ---NQMSEDFEGTQVLHLERNYRSAKPILELALSIISQDKSRPKKGLKSNHISSLKPHYR 339 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTL-TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 + + +E + + ++ P L DI ++V + A ++ +P Sbjct: 340 LFETNNKESYWIAREIKRIVGSCPELIFYNDIAILVRSSS-----LTRSLEHALSELGVP 394 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 Y + + I+ L + ++ S ++ +++VP +I + + + Sbjct: 395 YRMVGVNKFFDREEIRDLIAYLRVLANK-DSTSLIRVINVPP----RNIGKTKIDRIIFE 449 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 G+ + + V+ +++L + Sbjct: 450 SERRGLTFWQTLNEVKN-------------------------------ENILLSQRNDKS 478 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 + + + +L L + L + + + + + + Sbjct: 479 FLKSLKSFLCSISKLENRYLSNGHSATLSDLLLGILSEIKYYEYLVRKNKETVEEKWENV 538 Query: 617 QAIIAEGLGAQY---------GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 ++ + V L ++A ++++ + + V I TL Sbjct: 539 MELVQQSDNISCIFYELDYKISTIVLLQNFLTQIALVNEEQKEGE---SQKVTISTLHAA 595 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + + VV L + + + P + D++R L AQ L Sbjct: 596 KGLEWPVVFLPCLCENIIPHSRSDD----------------LDEERRLLYVGATRAQALL 639 Query: 728 YIS 730 Y+S Sbjct: 640 YLS 642 >UniRef50_B5GJP0 ATP-dependent DNA helicase n=20 Tax=Streptomyces RepID=B5GJP0_9ACTO Length = 1221 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 107/867 (12%), Positives = 194/867 (22%), Gaps = 119/867 (13%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS---DGEQDVGNPLLASWGKLGRDY 310 P L + R ++ + LF VG+P A +G G Sbjct: 348 PEVGETLRAQYRVVLLDEYQDTSVAQRVLLAALFGGGTGHPVTAVGDPCQAIYGWRGASV 407 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS---RSDNKRPL 367 L D +L N +S L + + + Sbjct: 408 AN-LDDFPRHFPHPDGTPARRQSLSENRRSGGRLLALANDLAAPLRALHDGVEALHAPAG 466 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 D + + + E++ L DR+ + P +I V+ +S Sbjct: 467 KAADGFVRCALLPTHAEEIDWLADRVAHYVRT--GTDPGEIAVLCRTAGDFSRIQA---- 520 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A R +P + P + ++ + + ++ L + R+ I Sbjct: 521 -ALVAREIPVEVVGLSGLLHLPEIADLRAVCEVLQDPGANASLVRL----LTGPRWRIGA 575 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L L G R + PA G+ + ++ + Sbjct: 576 RDLALL-------GRRARFLAGGRTGEDDPARRLAAAVEGIDPAEIVSLADAVDTFVEGG 628 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE--RPLEEWLPVCRDMLNAFFLPDAET 605 ++ A L +L RR LA L L + P+A Sbjct: 629 PDAEDGLPFSTGARTRFARLGRELRELRRALADPLMDVLHRVLAATGLDVELSASPNALA 688 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLM 665 + Q + + Q + V + T Sbjct: 689 ARRRETLGQFLDTAASFAANEPAASLLAFLGYLRTAEQYEKGLDNALPGGENTVKVLTAH 748 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD--------------- 710 + + + +V + G+ +P F + R Sbjct: 749 KAKGLEWDIVAVPGLVKAQFPSDRGRERFTARASVLPHPLRGDAATLPEVPAWTAKGLKA 808 Query: 711 -----------DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 ++ L + L S + R PS + L D+ + H Sbjct: 809 FQDDMREHQSTEELRLGYVTFTRPRSLLLGSGHWWGPEQKRPRGPSAFLTALHDHCARGH 868 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR--------------- 804 A + T R + AR Sbjct: 869 GEIEHWAEPPGPEDENPALRDTDPLPWPLPLDPAAHARRRAAAARVEHHLALLQHPADPP 928 Query: 805 ----------EWLPAASQAGKAHSEFVQPLPFTLPETVPLET---LQRFWAH-------- 843 E P +A P P E + E L + Sbjct: 929 RPDEPPEDPYEDGPDPDPYEEAPPAPRVPAPAPHGEDLTSEESRLLGSWDRDLDALEGEL 988 Query: 844 ------------PVRAFFQMRLQVNFRTEDSEIPDTEPFILE---GLSRYQINQQLLNAL 888 P L++ + P R L Sbjct: 989 RRAAASVREVPLPPSLTATQVLRLAEDPDGLARDLARPLPQAPKPAARRGARFHAWLERR 1048 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ-SMEIDLAC 947 + + P + + A R + + L+ Sbjct: 1049 LTAGHEQPRLPLPDEGEPEPREDAEISDDLDLEELKEAFERTPYAHRPAHRVEVPFQLSL 1108 Query: 948 NGVQITGWLPQV---QPDGLLRWRPSLLSVA------QGMQLWLEHLVYC-----ASGGN 993 G + G + V DG R+ +QL + L + A Sbjct: 1109 AGRVVRGRIDAVYAHDEDGRRRYEIVDWKTGRDRARADPLQLAVYRLAWAERHGIAPEEI 1168 Query: 994 GESRLFLRKDGEWRFPPLAAEQALHYL 1020 + +F+R R L L L Sbjct: 1169 AAAFVFVRTGETVRPTRLPGRAELERL 1195 >UniRef50_Q9K2F1 Exodeoxyribonuclease V, gamma subunit, putative n=7 Tax=Chlamydophila RepID=Q9K2F1_CHLPN Length = 1024 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 159/1109 (14%), Positives = 330/1109 (29%), Gaps = 168/1109 (15%) Query: 6 HSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLP 65 SN L A + + PF ILV + W++ L D Sbjct: 11 FSNSPRHLLAQLAEDITSTHQK-PFTKRWILVANATTGHWIKNQLVHVLS-----DHIFM 64 Query: 66 ASFIWDMFVR------VLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 S I+ + + + + ++ + +L ++ + F R +L+ + Sbjct: 65 GSTIFTASDSIVKHLFLGSGCSQPNIPDYLTLPLLINNILEEISKASKFENGREFLSPPT 124 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 ++ + K A F Q+ + A +Q L++ L Sbjct: 125 -----YETTKKLAAAFKQFHTF------------SQRPTKNASHYQ-ELFQIL------- 159 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 H ++ + F L + T + I G + LP + L + ++ Sbjct: 160 ---ESHFSSYEEMFTTILNNRTQEEDC---SLHIFGYAHLPKHLAEFFINLSTYFPVYFY 213 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 +PCR Y+GD+ + + + L Sbjct: 214 CFSPCREYFGDLLSDRAIDFFWNQLPDSPI---------------KNAWEHYVLSDRQAL 258 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 LA+ + D E + + F+ D+ L IQ+ IL+L+ + Sbjct: 259 LANLAHKSQSSQNFFLDREIDYQ-EMFLPSKHDSSLGVIQNSILDLKPTSPQD------- 310 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 +I + + REV+ + ++ +L ++P +I ++ + I+SY Sbjct: 311 -------FSQTKQTICIYRALNIPREVQEVFCKVTELLHR--GVSPEEIFILSSHIESYK 361 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + A+F + ++P +D ++ + + L S+ ++ +L LL P L Sbjct: 362 VHLNAIF-----NPHVPIYFTDEVDPRAEDLRNKILLLSSILQTQGDLHYILQLLTHPQL 416 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + + + WG R S Sbjct: 417 QQ-----PIDQNKVPYLIKKLSSEWGKISSKDRASGQQMKALGDLILEEYPFHQEGGRVS 471 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 W++ +P + + ++N++ + + E+ L F Sbjct: 472 QVEVWETTVPL-------------IYFIQERINLYLS--SSQHSYEDLFQNVFSCLEKIF 516 Query: 600 LPDAETEAAMTLIEQ-QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 + E + +T + + + L L + S + Sbjct: 517 VLSPEETSFITTLRNSLFPTFATSSCSLLFFTDFCLDFLLHF-------HKPSPLYDKPG 569 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 I +L + IP V +LG N + + + S D++ + FL+ Sbjct: 570 PYIGSLSSLSLIPKGYVFILGANKTT--SSDIFDLLNRTTTHEELAFSSTEDEENFHFLQ 627 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 L+S + +L+ISYI + Q N PS + + + + + + + Sbjct: 628 ILVSTKHELHISYISSAAQFN---LPSPFLNHIKETLDLPVETLPTQPYLSAFFKNKACL 684 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQ 838 H + + + S LP+ + L + Sbjct: 685 HTSQEYNYSLAHAFYSKKALLPSL----------------FIPTVKQVNLPQHLSLNEII 728 Query: 839 RFWAHPVRAFFQ--MRLQVNFRTEDSEIPDTEPFILEGLSRYQIN-----QQLLNALVEQ 891 + P+ F + L++++ + P + + L+ ++ Sbjct: 729 KGIFSPLDLFLKTNYNLRISYPEHLKKQQKLFPTKHQIEDFWNECFVDKEHDLIPSI--S 786 Query: 892 DDAERLFRRFRAAGDLPYGAFGEIFWE---TQCQEMQQLADRVIACRQPGQSMEIDLACN 948 AE LF +R L + T +R + + N Sbjct: 787 PHAEELFTYYREKTILLRNGLDKDPKHSPYTVTFSSSIFEERPYHESYLFPPLSLSFQGN 846 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLSV------------------AQGMQLWLEHLVYCAS 990 VQI G + V +GL Q ++ ++ V S Sbjct: 847 PVQIHGTIHGVCNEGLYLCSIDPGDSLKKTTRTLGSLPETSSEQKQLLERYVALAVLQMS 906 Query: 991 GGNGESRLFL----RKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWL 1046 + E PP + YL +++E Y S P+ +L S W Sbjct: 907 QHLSSDSALIKLTSFNXKENHHPPFS--DPEXYLRKVLEVYHLMSSQPIPLL--SPLCW- 961 Query: 1047 KTCYDAQNDAMLDDDSTLQKARTKFLQAY 1075 KT D + + ++A+ L + Sbjct: 962 KTLDDEEKFHQAVLSAISEEAKNPSLPIF 990 >UniRef50_A1VZC5 ATP-dependent DNA helicase, putative n=30 Tax=Epsilonproteobacteria RepID=A1VZC5_CAMJJ Length = 676 Score = 180 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 56/510 (10%), Positives = 145/510 (28%), Gaps = 48/510 (9%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 I L + ++ + S F+S VG+ + + G D Sbjct: 194 INLKDLLKEEKYEFDEILVDEYQDTNTLQSSLIEA-FHSKSLFCVGDYDQSIYAFNGADI 252 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKR----P 366 + F D D + ++ + + + + + Sbjct: 253 ----------NIIGGFKDRFKDVKIFSLNKNYRSSRSILALANKVILNNERLYPKELIVT 302 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 + + + + + + +L ++ +I V+ + S Sbjct: 303 RNDEFKAPSLLTFEELFDQYQNIAKMILT-----SGVSLEEIAVIFRNNSSADGV----- 352 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV--PVLAARFD 484 A ++ + + ++AF S+L+L + + L+ V Sbjct: 353 EVALREQGIASVRKGSGSFFESLEVKAFSSMLALVVNPKDIMAFIHLVQYTKGVGGVLAK 412 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 + L L G + N++ + + ++ + Sbjct: 413 EIFDALLKLGHGNLIKGFLDPDKNVNLQNHQKRNYQLGLFADLEELASETRFKFESEFDA 472 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE--WLPVCRDMLNAFFLPD 602 +L + + L A + + L + + L + E + + L + Sbjct: 473 HPILKLSKINDLCARNLEKIYLFLKKAMEIKHSLTLVNLICENSFYREICEELATKRATN 532 Query: 603 AETEAAMTLIEQQWQAIIAEGL--GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 + + + + I + + + + L + + VN Sbjct: 533 KAGQVDLLRKSENLEKIETKFNVLKELAKNYSDIYKYYNFLTLGASEMSSGK-----GVN 587 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + ++ + + F +V ++ + G +P + G +++R LF A+ Sbjct: 588 LLSVHASKGLEFDLVFVIDLAQGRFPN------------QKLMGMGGSLEEERRLFYVAV 635 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 A+ LY+SY + PS + E Sbjct: 636 TRAKNILYLSYAKYDKNKKTSFAPSRFLIE 665 >UniRef50_B2GEY3 ATP-dependent helicase/deoxyribonuclease subunit B n=4 Tax=Bacteria RepID=ADDB_LACF3 Length = 1245 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 130/1120 (11%), Positives = 278/1120 (24%), Gaps = 202/1120 (18%) Query: 15 ALMEFIVERERLDDPFEPEMILVQSTGMAQW-------LQMTLSQKFGIA-ANIDFPLPA 66 +M + + P + + LV + L+ L Q A AN+ + Sbjct: 17 QVMLDRLAAQYQQAPNDTYLYLVPNHVKFTTEVAVLKGLKKRLKQTGNYAQANVAVLSFS 76 Query: 67 SFIWDMFVRVLPEI-PKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF 125 W + P+ S + K++ L L + + Sbjct: 77 RLGWFLCKDDPDYQKPRLSNVGMAMVVAKIIRELKAESPD--------LLKMFRGESERQ 128 Query: 126 QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWH 185 +++ + L Q + +AL Sbjct: 129 GFATEVTK----------QLVELQNANIQPADLAPDQ-ETGIIKRALASQAGGGRAS--- 174 Query: 186 RANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKH---IEIHLLFTN 242 S VF ++ L +Y + A+ H + + N Sbjct: 175 ----------------------QSTVFTDKMTVLYEIYRRFEAAVTTHVTAPDRSAMLLN 212 Query: 243 PCRYYWGDIKDPA-YLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLA 301 D+ YL + + + R ++ L + P Sbjct: 213 HLEA--ADLSTTHVYLDRFAGEFSAQEQLIVDALIQRAADTTVSLILDRDYRGRELPSQN 270 Query: 302 SWGKLGR-DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 + Y LL+ +D + Q + + + V E Sbjct: 271 NLYYRSAKQYQDLLNLATQQVGVDVLDP------IVLNQPNQRRVSDALVGVEEWMEADA 324 Query: 361 SDNKR-PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 L + F + E+ + ++ ++ RD +V+ +D Y Sbjct: 325 RFALPDRLPAPTDQVGFFTAPTRVAELNRVATKIRQLVATGQ-YRYRDFLVVTRHLDGYQ 383 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 ++ +F + +P ++R + P+ +L + + DV+ LL +L Sbjct: 384 TMLEPIF----SRHQIPVFNDNQRPMATSPLATFTAALFKVLKDYYQEADVMELLKTGLL 439 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 T E L+ + G +W L G ES Sbjct: 440 VP---ETPEELQQEGRAKRNPNTFMTAVYRTENYCLKFGKGGRSWFDERPWRLEGEQPES 496 Query: 540 AQGEWQSVLPYDESSGLIAELVGHL---------ASLLMQLNIWRRGLAQERPLEEWLPV 590 + Q+ + + EL L L + + L W Sbjct: 497 DALKRQNAQINWVKNYIKDELAPALADLQTATTGRELATKFYQFLLDQGVRHQLYSWAHQ 556 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP-------LSLLRDELAQ 643 ++ + I Q + ++ E + P ++ D + Sbjct: 557 AQE------SGQLTQLRDVQQIWQTFGTLLDEYVTILGDQVAPTEQPGQLVAEFADLMNA 610 Query: 644 RLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 + R +Q V + ++ KV+ ++G D V P A G + Sbjct: 611 GFNAGRYAQIPSTLDQVLVSESGMIQDNQRKVLFIMGATDDVMPEVKASEGLLSDPDREL 670 Query: 703 RGD------------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 + +++ +L +++S ++LY+S S D+SE S ++ Sbjct: 671 LKRGLNDDQFLPISGTDQINNEPFLNYLSMLSVTERLYMSAPLMS-SDDSELTLSPYLKG 729 Query: 751 LIDYIGQSHYLPGDEALNCDESEAR----------VKAHLTCLHTRMPFDPQNYQPGERQ 800 L + Q + + V A + + + + G + Sbjct: 730 LARHFNQWDDQNNAPTTDLPDRPNPRASEDDVWSFVAAPAVTMGNLIEVERLSKDTGRKL 789 Query: 801 SYAREWLPAA--------------SQAGKAHSEFVQPLPFTLPETVP------------- 833 + A + A + G+ PL L + Sbjct: 790 TSAWRDVARALTRYDEGLTGRLNDIRDGQYAKNEAVPLQPELAARLYTTNRQGQVTNQLT 849 Query: 834 --LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD-TEPFILEGLSRY--------QINQ 882 + L++F+ +P F + L + R E D + + L+ + + Sbjct: 850 ASISQLEKFYQNPYDYFLRYGLHLKKRDELEVSSDKSGTLNHDALAFFVQSVIDEPDLQL 909 Query: 883 QLLNALVEQDDAERLFRRFRAAGDLPYGAFGEI-------------FWETQCQEMQQLAD 929 L Q L + E+ + + L Sbjct: 910 ADLVKEEHQGRQAELIDQAFEQAMNQQEELRELAANNSRVNLQLQVAKQLITTMAKTLCL 969 Query: 930 RVIACRQPGQSMEIDL---------------------------ACNGVQITGWLPQVQP- 961 + ++E V + G + ++ Sbjct: 970 QATQTDAQPVAVEKAFGQADWTGESQAAELPALTFDLTGAGLGEGAKVSLRGRIDRLDEL 1029 Query: 962 --DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLF 999 ++ A Sbjct: 1030 KLGEQTYQLVVDYKSYNKAFDLVDAYAGQALQMLAYLNAL 1069 >UniRef50_C8WQE2 ATP-dependent nuclease subunit B-like protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQE2_ALIAD Length = 1169 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 122/1039 (11%), Positives = 274/1039 (26%), Gaps = 135/1039 (12%) Query: 7 SNRLDVL--------EALMEFIVERERLDDPFEPEMI-LVQSTGMAQWLQMTLSQKFGIA 57 SNR++ + + + R PF P + +V A + L + A Sbjct: 2 SNRVEWWIGAAGSGKSSRVAEEMRRAAEAQPFGPPVFWVVPE-STAFAAETLLMDRVRAA 60 Query: 58 ANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTL----LRH 113 ++ + P+ + +Q + L L + L H Sbjct: 61 FRVEVVTMRRLADRVCAHGGMARPRLTQVGRQLLLRAAYDELEPSLGPLRRAVRNPSLYH 120 Query: 114 YLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALV 173 +L D+ +S + + R D + + + L L+ Sbjct: 121 HLLSAFDELAAHGVSPEQLGALLEMSAARSDEVED-KQRAVHRSLVGKLGDVLKLYVRYR 179 Query: 174 EYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKH 233 + A+ +++ + +A + +++ G A P Q + AL + Sbjct: 180 QL-----AEAAGFADPALLYLDAVHAAPHVSWLEDASLYLDGFHAFSPAERQFISALARR 234 Query: 234 IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ 293 + ++ W D + S L + + F+S+ + Sbjct: 235 AKRLVIT-------WEDTG--LEGERWEALLEEASSPAAWPHLSVWVDAHEEHFSSESQA 285 Query: 294 DVGNPLLASWGKLGRDYIYL-LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAG 352 LL RD+ + L + A + L ++ Sbjct: 286 VAAYHLLE----CARDFAQVSLDQAFCRMPIGATEGRFGASPLVYLERA----------- 330 Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 + + E+ + D + ++ + + PRDI V V Sbjct: 331 ---------LAGHAPEQPIRGVRVSAFGDRAEELCAVADEIAHLV-QHERVRPRDIAVCV 380 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 +D I R +P +I HPV + + + F + + A Sbjct: 381 PTVDG----IGRDLADELEVRGVPVSIDSFATLADHPVGQLLRGAIGAVRTGFDLDTIAA 436 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 LL P++ + ++ E G+ A + Sbjct: 437 LLRCPLVPVKRR------EAFDLYLREHGVSGFAAWLAPEPWAFAARAPRSASGLRDEEA 490 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 + + + + + + E L LL + Sbjct: 491 DEIRRQLGDALRPVIQAFAQPTLRLLEAARALWELLQAFR---------------VKDAL 535 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 D A++ + + A+P + D + + + R+++ Sbjct: 536 AQSVVQVGDDPMAGVIHEQAWSGVTALLDDLATLEPEIALPAYEVADLVLESMASLRLTR 595 Query: 653 RFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR-- 709 V +C + V ++ +D P ++ P G ++ + R Sbjct: 596 IPSDVDAVFVCDFARADNWSRPRVFVVAADDASLPPRVEPSGILRDDERLAFAEVFLRPL 655 Query: 710 ----DDDRYLF----LEALISAQQKLYISYIGRSIQDNSERFPS-VLVQELIDYIGQSHY 760 +D+R + A + L ++Y P+ + E + Sbjct: 656 GRTSEDERRALECMPYRVMTRASEALVVTYAASEGGIERHLAPALASLVERGHLSIDAAR 715 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA----------- 809 G ++ ++ + L+ +HT PF+ P + W A Sbjct: 716 GEGAVPVHPVQAMRLLADALSRVHTGAPFERVTQDPVVQDVLTYMWTGAGDVARFQRVLA 775 Query: 810 ---ASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRT-EDSEIP 865 + P V + L+ + R F Q L++ + Sbjct: 776 GLCHRPRPWRLPAEWIRDLYGDPIRVSVSRLETYAKCSYRHFAQYALRLEPLALQPEAER 835 Query: 866 DTEPFILEGLSRYQ------------INQQLLNALVEQ---DDAERLFRRFRAAGDLPYG 910 + +I + + + L + + E+ + + L Sbjct: 836 NAGTWIHAAVQLATQRLADDHRRLSELGHEELETALLEIAHQALEQAAQDTKLQSTLERP 895 Query: 911 AFGEIFWET-------QCQEMQQLAD-RVIACRQPGQSMEID---LACNGVQITGWLPQV 959 E QLA ++ + ++D V + G + +V Sbjct: 896 DVAVYVEERRRHFEFVVRAIWMQLARGQMRPLWLEKEFRDVDMGAWNGVRVVLDGRIDRV 955 Query: 960 QPDGLLR--WRPSLLSVAQ 976 ++ Sbjct: 956 DRLEQGELALCVYDYKSSE 974 >UniRef50_UPI0001C41A7D ATP-dependent DNA helicase UvrD/REP family n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41A7D Length = 1565 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 100/1016 (9%), Positives = 278/1016 (27%), Gaps = 116/1016 (11%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQK--FGIAANIDFPL 64 + + VL ++F++ E+++ +++ + A+ L+ L + + + + Sbjct: 29 AGKTRVLIERIKFLINEEKVEP--SSLLVITFTRKAAEELKERLYKDIDESVVSMMQIST 86 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 +F + + +L + + L Y D + Sbjct: 87 IHAFCRVILSEIGEYNT---------------RVLGDSVNEKQKMFLNKYKKDLGFVNEC 131 Query: 125 FQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRW 184 ++ +L D+Y Y + + +E + ++ Sbjct: 132 HIRQNEIFNLIDKYGEYATFKVDSKKLVDYIERNTKIDPEYIDFVNEYMKENDGRYPFDE 191 Query: 185 HRANLYQRFIETLESATTCPPGLPSRVFI---CGISALPPVYLQALQALGKHIEIHLLFT 241 AN + T P + + G S + ++ L L T Sbjct: 192 VMANDAYKKSRTNALYLQIAKSYPKYLELLDEKGFSDFDQMQIKTLN---------YLKT 242 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLL 300 NP Y + ++ + + L + D VG+ Sbjct: 243 NPNTIY-----------------KNVLVDEFQDTDPVQMKIFEILMKNADSFTVVGDIDQ 285 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 + +G G + L ++ + + N+ + + I+++ + E + Sbjct: 286 SIYGFRGAN-KNYFEYLYNNYDDRVYK--VNLNVNYRSANQIIDISEDFIKSQRAEGAKQ 342 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 LD + F V + + E + + + + + + +I ++ I + Sbjct: 343 DKAL-GARDLDRNTYFLVNENSESEAKAIFEMIRYLHDSGKIENYNEIAILSRSIRFSNT 401 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL-------PDSRFVSEDVLAL 473 D +PY + P + + I+L+ + +F ++ L Sbjct: 402 --AQDLIQLFIDNNIPYHVRGVPDLFDRPEIRSVITLIHHLIEDTNPHNHKFDLWELEWL 459 Query: 474 LDVPVLAARFDIT----EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 F+ + + + + E + ++ L++ H + F Sbjct: 460 NLKAYTGESFNQVLFNLSDETKNILNSIQEEFEENVLKEEKRAYLKVTGKKSHKYVFKRV 519 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR------RGLAQERP 583 + + + +E+ +LN + + E Sbjct: 520 FERDEKVLIELFKNIERPILSNENLIRYGVKNKQDLEFFRRLNDLKAYFNSEEYMDSEDT 579 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG-DAVPLSLLRDELA 642 + + + + D + + + + D L L Sbjct: 580 ILDIYMKLLTDVCNYLTEDFINDPINRDELKNLAILSNTFHNYELIVDNKNLKGAYYFLR 639 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP--LGFDLMS-- 698 + + V + T+ + + F VV LL +N +P Q F + Sbjct: 640 YNIAGYSTDNDE-SEGVQLMTVHKSKGLEFPVVILLSLNHKKFPSQYKDEYDRFYTPNSC 698 Query: 699 ------QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 + + +++ + A+ AQ L +S + + + EL Sbjct: 699 LEYKNYDSKEEEIQDYLEEEDRIVYVAMTRAQDILVLSNLIKETPELEGLKA-----ELN 753 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 D + Q + + + + + + + + Sbjct: 754 DNLSQIEKIEIIKDIPKG---------------HIKIHDLINRNLSSCKFLEDDFSQLPK 798 Query: 813 AGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL 872 + + + +L+ + A P + + + F+ Sbjct: 799 TVCEKPQVKKEDFLN----LSFYSLENYVACPFKYKLMHDINFSES-TMEFNKLRGLFVH 853 Query: 873 EGLSRYQINQQLL---NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 L IN ++ N + D+ +F RF+ + + ++ ++ + Sbjct: 854 NLLE--TINNRIRSNGNRYIGDDEVLAIFERFQDSFRFENLRLSKKEYDIIKNDVLYYYN 911 Query: 930 RV-IACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLS-VAQGMQLWLE 983 + + ++G + + + + + +++ Sbjct: 912 TFGKDFNILNTELSFSIKKEYYGLSGIIDLIYKTKDGKMGILDYKNTERISRHYVQ 967 >UniRef50_A7AXS4 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXS4_RUMGN Length = 625 Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats. Identities = 60/511 (11%), Positives = 141/511 (27%), Gaps = 99/511 (19%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIY 312 D L K + ++ + + +L N+ VG+PL A + G D + Sbjct: 195 DYYTLEKYRNIFQYILVDEFQDISISQALLLRKL-NTKNTMIVGDPLQAIYSFRGGDSRF 253 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDIL------ELENRAVAGVNIEEFSRSDNKRP 366 +L+ F D + N+ ++ N+ + + Sbjct: 254 ILN----------FDTDYKDVKVINLNTNYRCSKDIVFTANKLALSIPDSQHKNYVESIS 303 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 E + ++ + + DI ++ Sbjct: 304 NKENFQIPELRHFPDDYEECLWVASKIGEL--KFKGYDYNDIAILARTNAQLQK-----L 356 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 S D + + I D + P ++ IS L + +E L + P Sbjct: 357 ESTLHDEDIAFEIVDGKTFTELPEIKLIISYFKLALNTNDNESFSYLYNKP--------- 407 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 RW + + E ++ Sbjct: 408 ---------------NRW--------------------------LDKKFLKEVTDNSFKR 426 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER--PLEEWLPVCRDMLNAFFLPDAE 604 + S I + ++ L + + + + R+ L+ Sbjct: 427 NISLYNSMFTIDRRNWRFKKGIDEIIEVINYLQNNQNSNISDLVRFLRNRLDIDKFVTKG 486 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 ++ +Q + + + + + + V + T+ Sbjct: 487 KQSDDGSYIEQIDNLNSF--ENICSKYSSIKEFVSYIDELNTEMENK---DNDKVKLLTI 541 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + + + VV ++G N+ + P DD+R LF A+ A+ Sbjct: 542 HKSKGMEYPVVFIIGCNEEILPHY----------------KNENVDDERRLFYVAITRAE 585 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 ++LY+SY+ + + + S ++++ + I Sbjct: 586 KELYLSYV--DLYNGQTKLISSFIKDVENTI 614 >UniRef50_UPI0001C42BC3 ATP-dependent DNA helicase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42BC3 Length = 785 Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats. Identities = 56/511 (10%), Positives = 145/511 (28%), Gaps = 89/511 (17%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYI 311 + A L + R S ++ + E L + VG+ + + G D Sbjct: 342 NQALLERYQERFAYVSIDEFQDINKVQVELITLLTETKRNLCVVGDDDQSIYAFRGSDPD 401 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLD 368 Y+L+ F P+ + + + + N+ + + Sbjct: 402 YILN----------FKSDYPEAKVCVLDQNYRSTHPIVESANNVITTNKTRFNKQLHAQH 451 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 +++ + + E ++ + + + ++ P D V+ + + + S Sbjct: 452 TDENAPVLFFPYDEEEEATMIVNDIKSRIKN--GAEPSDFAVLFRTNVTSRALFERMVTS 509 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + SD + + ++ L L + + + L+ L + + Sbjct: 510 SLP----ISIESDGDSFYRRKAVRKVLAYLQLCINPDNGQAIQDLIGALFLKQQVIQDLK 565 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L + +++ Sbjct: 566 ALT---------------------------------------------ITEDCSFVEALT 580 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM-LNAFFLPDAETEA 607 + L +L + + ++ P+E + ++M L + Sbjct: 581 HLSGLPNFQQKK-------LQKLPEQFKQIKKKTPVEAIAFIEQEMGLKDYLKKQGNEGN 633 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG--PVNICTLM 665 + + + + + + + ++ +++ A V + T+ Sbjct: 634 KLDRGSDDVRDLKVAARQHE-----TIEAFIQHVDHMIAKQEEARKMPAEKTAVQLLTIH 688 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + +K V +LG N+G P A + + GD +++R L A+ A+ Sbjct: 689 RAKGLEYKHVYILGANEGSLPHDYALDAW-------REGDDKPLEEERRLMYVAMTRAKN 741 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 L IS S V+E+ Sbjct: 742 TLAISVPTMR--RGKRAHSSRFVREVKKMAR 770 >UniRef50_B5IF83 UvrD/REP helicase domain protein n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IF83_9EURY Length = 927 Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats. Identities = 87/832 (10%), Positives = 199/832 (23%), Gaps = 155/832 (18%) Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 P + L+ + ++ + T Y + + L + ++ + Sbjct: 187 PEFYDVLEKYEEALDSYHRLTFGRLIYLA-VNKIKEEPEKLPKISHLIVDEYQDINHAQE 245 Query: 281 ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV-TPDNLLHNIQ 339 E + + VG+P + G D Q + FV PD I Sbjct: 246 ELIKLIGKNANIMVVGDPRQTIYQWRGSD----------DQCFERFVTDLYPDAENIVIP 295 Query: 340 SDILELENRAVAGVNIE---EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 + +N G + E + ++ + + + + +P E + +++ + Sbjct: 296 ENRRSGKNIVTVGNTVADKFENRKFEHMISIKERNGYVYVILPETPDDEARWIANQIQKL 355 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + + L D +++ + + VF +PY + A Sbjct: 356 V-NEKGLKYSDFGILLRSVGTSGDPFIKVF----KGMGIPYIVGGTIGLFRREEAMAVGK 410 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 L + + L +DD L Sbjct: 411 LFNWLYDGG-------------FFKNYRGKVTEYDELVDSA--------LDDWISATGLL 449 Query: 517 PATGQHTWRFGLTRMLLGYA---MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 ++ + L + + + Q + ++L + L E H Sbjct: 450 EGEDRNDLKAKLLKWKMDVYSGTYPNFQDAYHALLNILDFKKLDPENKIH---------- 499 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 + L ++L + +T + ++ Sbjct: 500 --------AAIMANLGRFSNLLGDYENALRLGGNKLTWNKSNLNGLMWYINLYA------ 545 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL---A 690 +++ V I T+ + + + VV + + +P Sbjct: 546 --------TTAYEEQLSEDIRGIDAVQITTIHQAKGLEWSVVFIPSLVSRRFPSSHVGEH 597 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 P + DD+R L A+ A+ L +S N + S ++E Sbjct: 598 KEWLISRELFPASRYDLQMDDERRLLYVAVTRAKSTLVLS--AFRRITNKVKI-SPFLEE 654 Query: 751 LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 ++ + + + Sbjct: 655 ILIECPKIIKAISANSDVILD--------------------------------------- 675 Query: 811 SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 T + + P + + Sbjct: 676 ------VDYEGTSGEDNDIYTFDAGEIVDYTKCPYFYRLRHIWNYEAPLAEE-------- 721 Query: 871 ILEGLSRYQINQQLLNALVE-----QDDAERLFRRFRAAGDLPYG--AFGEIFWETQCQE 923 L + L VE + + + LPY E E + Sbjct: 722 ----LGYGKALHYCLRRAVEIHKNGLNPFSAILTAVKKDFYLPYAPSHKAEKMKEGAQRM 777 Query: 924 MQQLADRVIACRQPGQSME--IDLACNGVQITGWLP-QVQPDGLLRWRPSLLSVAQGMQL 980 + + + + +E ++ ITG + + + R S Sbjct: 778 LLEYVANNLNDIESVAEVEYRLEFPQKNSTITGKVDVIIDRGENVEVREYKTSTKVTKPH 837 Query: 981 WLEHLVYCASGGNGESRLFLRKDGEWRFP-----PLA-AEQALHYLSQLIEG 1026 + V+ + G + K P+ +E AL + EG Sbjct: 838 HVALQVHLYALGLKGLGYKVGKGSVVYLSESRIDPIDVSEDALANARKYAEG 889 >UniRef50_A2F783 UvrD/REP helicase family protein n=1 Tax=Trichomonas vaginalis RepID=A2F783_TRIVA Length = 727 Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats. Identities = 68/552 (12%), Positives = 155/552 (28%), Gaps = 45/552 (8%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPL--------FRDSENAGQLFNSDGEQDVGNPLLAS 302 +K K + ++ + ++ + + VG+P + Sbjct: 207 LKHQRVAYKYRKLYQYILIDEFQDTSDINFAILKLILQQSMTRQPPNRRVTIVGDPHQSI 266 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS-RS 361 + G + + F+++ PD + + E+ A +I +F Sbjct: 267 YSFRGAN----------PDNIKQFLEMFPDAGHVTLSKNYRSCESIVKASQSIIKFDGNE 316 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 + P + I F E + + + M+ ++ RDI +M Sbjct: 317 TELISMIPGGNPIKFISASDAYAEADSICTEIERMVYPGSSIQYRDICIMFRMKK----- 371 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 + + R +PY+ + + +S L + E+ L Sbjct: 372 VASELEMELFRRNIPYSNKRGLSFFMRSEVREIVSYARLLLNFGSEENDTNQLLSSSFEM 431 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 ++ + LR S + L + + T L + Sbjct: 432 VLNVPDRQLRACIAPQVTSEASKNKVNVLKYLELLINSKIKSDFPKATIKKLAEFYQIIG 491 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ--ERPLEEWLPVCRDMLNAFF 599 + + + S L + + +L + L+E+ +DM+N Sbjct: 492 KLNRQICQINTSLSTDTVLETIIE--ITKLCNLDENSEEKNSEDLDEFSEAVQDMINDRN 549 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 ++A G L D + + V Sbjct: 550 ETFQLLLEESKRFH---IRLLAANEGTPLSSQKCLQKFIDSITLETTSSNMK-----NAV 601 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS-RRDDDRYLFLE 718 + T+ M+ + V ++ N + P D S GD+S +++R + Sbjct: 602 TLSTIHQMKGLESPVCFIMRFNQSILPMA------DKDSDDSGLGDQSVSLNEERRILYV 655 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 A+ A+QKL+++ S + E+ + D+ + ++ Sbjct: 656 AMTRARQKLFLTCALS--VRGKVMEISQFLPEIDQNYITRDIILTDDEKREVQKIMKLNE 713 Query: 779 HLTCLHTRMPFD 790 + F Sbjct: 714 EDSDSDFEFNFS 725 >UniRef50_C4Z7Y1 DNA helicase II / ATP-dependent DNA helicase PcrA n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z7Y1_EUBE2 Length = 717 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 73/686 (10%), Positives = 181/686 (26%), Gaps = 137/686 (19%) Query: 123 KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQ----------------- 165 K F L+ + A L + V +A T + Sbjct: 48 KTFVLTYRIAYLITELFVEPSSIVALTFTNKAASQMKHRLRNIVGDNANCFTGTFHGYCN 107 Query: 166 APLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQ 225 L + + T + + + E ++ + I + + Sbjct: 108 MFLKEEIHRLTFPKTFTILDKKAELEMIKDVAEDMGISLKDNTAKKIMSDI-DITKQDMS 166 Query: 226 ALQALGKHIEIHL-----------------LFTNPCRYYWGDIKD------------PAY 256 ++ + + L C Y D +D Sbjct: 167 YVELMAGVDKTELKRRASSEKNVDKKVFYNYLKRQCDNYALDFEDLINFTLYILNRNEDV 226 Query: 257 LAKLLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASWGKLGRDYIYLLS 315 + + + ++ + + L VG+ + G D Y+++ Sbjct: 227 RIRWQEKCQYVLCDEYQDVNMKQDMLLHILSGLYQNLFVVGDDDQNIYTWRGSDPEYMIN 286 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLDPLDS 372 F + +++ + N A + ++ + P + Sbjct: 287 ----------FDKTHENLQDYSLTENFRSTPQIVNAAKSLISANQNRLEKQMISNRPDGN 336 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 F+ + ++E + D +L + ++ + D ++V A Sbjct: 337 KPVFNAADTEEKESLWIADTILDNVAKN--MKYSDHTILVRAASQ-----TRSLEEAFIK 389 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 R +PY I + +S + + S + + + R ++ + Sbjct: 390 RKVPYKILSGAKFYESEEIRTVLSYMRMVYSLTDMDLLYTIS-----RPRRGFGKKSVEK 444 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L+ ++ ++++ E Sbjct: 445 LKNAAAQNNC---------------------------------------SLFKALGKQIE 465 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 + + V + + +L+ + + C DM L + + + Sbjct: 466 DGDITQKNVIEYYNAISELHD----TYVTYTCTDIVNKCLDMGYRKALEQDIDQTRLDNV 521 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 + + I L + V L+ L A Q+ + V + T+ + + F Sbjct: 522 SELIRTIT--ALEEDNQEKVELADLLSHFALFSAQDEDGEY---NVVKVMTIHTAKGLEF 576 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 V + G+ +G +P +++R L A+ A+ LY+S Sbjct: 577 DTVFVPGLVEGQFPSSRLRN-------------EDEYEEERRLLYVAMTRAKNMLYLS-- 621 Query: 733 GRSIQDNS-ERFPSVLVQELIDYIGQ 757 +D PS + ++ + Sbjct: 622 TYRKKDGRFAARPSAFLSDIDTNLLD 647 >UniRef50_Q2LTE2 UvrD/rep helicase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTE2_SYNAS Length = 657 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 63/529 (11%), Positives = 144/529 (27%), Gaps = 96/529 (18%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIY 312 P L R ++ + +E L + VG+ + + G ++ Sbjct: 208 PDVLQHYAERFEHILVDEYQDTNRIQAEIMDLLASRHRNIMVVGDDSQSIYAFRGANFAN 267 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDP 369 + +F + PD + ++++ A + E + + R + Sbjct: 268 ----------IMSFPEKYPDCRIFKLETNYRSTPEILHLANLSIENNENQFAKSLRAVRE 317 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + ++ E + R+L + + + ++ ++ + F Sbjct: 318 AGLRPVVVPARNALQQAEFVAQRILELHRD--GIPLHEMAILYR-----AHFHAMDVQME 370 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 R +PY I ++ + L + + + I ++ Sbjct: 371 LTRRGIPYEIRSGIRFFEQAHIKDVTAYLRILGNPLDELAWKRI-----FGLCPKIGKKT 425 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L Q+++ESG ++ L Sbjct: 426 AEKLWQFLSESG----------------------------------------EPLEAALR 445 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC-RDMLNAFFLPDAETEAA 608 D + G LA L R L + + + + A+ Sbjct: 446 EDFLKVVSKTARGGLAFFQEVLIKLREEAVHASTLPDLISLIIERGYRKYLRETYTDTAS 505 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA------GPVNIC 662 +Q + L EL+ + + + A V + Sbjct: 506 REEDLEQLAEFSGKFSS--------LEDFLSELSLMTNMDADGRDKAAGDDLQENKVILS 557 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 T+ + + + VV L+G +G+ P + A ++ + LF A Sbjct: 558 TVHQAKGLEWSVVLLVGCAEGMIPLERAVQEAGGEEEERR------------LFYVAATR 605 Query: 723 AQQKLYISYIGRSIQDNSE---RFPSVLVQELIDYIGQSHYLPGDEALN 768 A+ LY+ Y + PS ++EL+ + + Sbjct: 606 AKDYLYLCYPQTDYSRWAGFANLSPSRFIRELVPSSRKKELPFEHWVVE 654 >UniRef50_Q9S3U7 Rep helicase n=2 Tax=Gammaproteobacteria RepID=Q9S3U7_LEGPN Length = 467 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 55/515 (10%), Positives = 132/515 (25%), Gaps = 77/515 (14%) Query: 257 LAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ-DVGNPLLASWGKLGRDYIYLLS 315 + + R ++ + +L VG+ + + G Sbjct: 3 MEYWQNKIRHLLVDEYQDSNSSQYLLVKKLAGVRAHFTVVGDDDQSIYAWRGA------- 55 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN---IEEFSRSDNKRPLDPLDS 372 + L P + ++ + A + + Sbjct: 56 ---KPENLAQLQKDFPRLKIIKLEQNYRSTSRILHAANHLIAHNQHLFEKKLWSDLGHGE 112 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 + C Q E E + + D ++ +F Sbjct: 113 LLRVVSCKDEQDEAEHVIAGFGRAINYVIGQKYSDYTILYR-----GNHQARIFEKVLRH 167 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +PY IS ++ + + + L L + L + P + I E L Sbjct: 168 HGIPYHISGGQSWFAKLEVRDIFAYLKLLCNEADDAAFLRAITTP----KRGIGESSLEA 223 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 L ++ GI D++ L + + + + + E Sbjct: 224 LGRYAQSRGISLYHGSDHLA-------------------LSEFVADKQRMIFHDFKLWME 264 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 L L ++ + + + + ++ F L Sbjct: 265 DIKKRISSDSVLEHLRHDVDGIDKLIFMNNVILPPRHKKKWIMYGSFWNGLIVCWIRNLN 324 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 + W I + + + L ++ + TL + + F Sbjct: 325 NRSWMLWIDWYWSIYWNNPMNLQVMWS--------------------QLMTLHASKGLEF 364 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 + L+GM + + P +++ + +++R L + AQ+ L + Sbjct: 365 PFIYLVGMEEELLPHRVSIDD-------------DQIEEERRLAYVGITRAQKGLCFTLA 411 Query: 733 GRSIQDNS--ERFPSVLVQELIDYIGQSHYLPGDE 765 + + + PS + EL + G+ Sbjct: 412 KQRRRAGELQDCVPSRFLDELPQESLEWFGKGGER 446 >UniRef50_UPI0001699EF8 Exodeoxyribonuclease V, RecC subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699EF8 Length = 196 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 83/203 (40%), Positives = 120/203 (59%), Gaps = 7/203 (3%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M+ YHSNR++ L + + L P E I+VQ+ GMA+WL L+ + G+AAN+ Sbjct: 1 MILSYHSNRMERLLDHLLEQL-STPLGSPLGRETIVVQNPGMARWLSQQLALRSGVAANL 59 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 +FPLPASF W+++ L E+P ES F+++S+ W +M LLP LLE+ F L+ YL DS Sbjct: 60 EFPLPASFTWNIYQAWLGEMPAESGFDRESLHWCIMGLLPGLLEQPAFAALQRYLEGDSG 119 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + + +QLS + ADLFDQYLVYRP + WE + G + + W+A LW+A+V T Sbjct: 120 ELRRYQLSGRIADLFDQYLVYRPQMVLAWENSAIETGT-QDEPWKAALWRAIVAQTQ--- 175 Query: 181 QPRWHRANLYQRFIETLESATTC 203 HRA L+ RF + Sbjct: 176 --AEHRAALFDRFQRMVARGDAP 196 >UniRef50_A6W771 UvrD/REP helicase n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W771_KINRD Length = 1128 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 110/879 (12%), Positives = 207/879 (23%), Gaps = 148/879 (16%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIY 312 PA A R R ++ + + LF + VG+P + +G G Sbjct: 279 PAVAAGERARHRVVLLDEYQDTSYAQLMLLRALFGAGHPVTAVGDPHQSIYGWRGASAGN 338 Query: 313 LLSDLESSQELDAFVDVT-PDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 L D P +L N A +N + + P Sbjct: 339 LGRFPGHFPRADGTPAARLPLATSWRNDEAVLAAANLVAAPLNAAPGAGAVAVLRPRPGA 398 Query: 372 SSITFHVCHSP-----------------QREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 + S + + E L + + R V+ Sbjct: 399 GTGRVRAAFSATVEEEAAEVAARLAEVWRADSERLA--VQRRVPGADPRPRRTAAVLCRK 456 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 ++ V A D LP + + P + ++ L + + + L Sbjct: 457 RSQFT-----VLQRALRDAGLPVEVVGLGGLLTTPEVADVVATLHVLHDPARGDHLARL- 510 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + AR+ + L L W R + E P + + L Sbjct: 511 ---LTGARWRLGARDLAALGAWARHLQHRRAGLPPDPHE---PGEEPLVLPDEVEAVSLV 564 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 A++ G + + L L+ L L R P + V R + Sbjct: 565 EALDDLPG---AGWSGPDGRSLSPRAHARLSRLAAVLRRLRNRTHLPVP-DLVGEVERAL 620 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR----LDQERI 650 L + + + A + L L E+ Sbjct: 621 LLDVEVAARPGSSPASARANLDALADAAASFSAGSQRPGLGGFLAWLDAAEVRERGLEQG 680 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL-------MSQKPKR 703 + V + T+ + + + VV + G+ + +P L + P R Sbjct: 681 ASEVSTDAVQLLTVHASKGLEWDVVAVPGLVERTFPASGETDPGWLGGSGALGVLPYPLR 740 Query: 704 GDRS------------------------------RRDDDRYLFLEALISAQQKLYISYIG 733 GDR + ++R L A A+++L +S Sbjct: 741 GDREGLPRFDVEGAGTQKELDTARQRFLEACGQHQLAEERRLAYVAFTRAKEELLLSGAH 800 Query: 734 RSIQDNSERFPSVLVQELID----YIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 R PS ++E+++ + +P A R + P Sbjct: 801 WDDAA-KPREPSRFLREVLEAPRGAVPGLVVVPPAPAPEPGAPNPRTANPQRVVWPVDPL 859 Query: 790 DPQNYQPGERQSYA-----------------------------REWLPAASQAGKAHSEF 820 + + + W + + Sbjct: 860 ASRRVEVAAGAALVRAAMAERAAGGAAGPEAGGPEGGAVDEETAAWAEQSRLLLTERATA 919 Query: 821 VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQI 880 LP + L P L + R + P R Sbjct: 920 HDAPGVLLPAHLSASRLVTLAQDPDA------LALQLRRPVPQEPRP------ATRRGTA 967 Query: 881 NQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQS 940 L L +A + + + LA A Sbjct: 968 FHAWLEQRFTASSLLDLVDLPGSADEDAADDAELEALQR-----RFLASEWAARDPVAVE 1022 Query: 941 MEIDLACNGVQITGWLPQVQ----PDGLLRWRPSLLSVAQGMQL----------WLEHLV 986 + ++ + + G + V DG RW + + + L Sbjct: 1023 VSVETPVADLVVRGRVDAVFAAVGADGRTRWDVVDWKTGRPPEGEAARARDVQLAVYRLA 1082 Query: 987 YCASGGNGESRL-----FLRKDGEWRFPPLAAEQALHYL 1020 + G + + R L + L L Sbjct: 1083 WSRWRGVPLEDVSAAFFYASTGETVRPVDLLGAEDLERL 1121 >UniRef50_C6CW81 UvrD/REP helicase n=2 Tax=Bacillales RepID=C6CW81_PAESJ Length = 692 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 77/607 (12%), Positives = 167/607 (27%), Gaps = 78/607 (12%) Query: 155 VEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFIC 214 + G Q + + + L + H + I L S +P Sbjct: 150 LRRRGYKQNILGETGRKQIYFKRLLRERNLHETYQPETLITLLSSYKMQMIAVPDLPEKS 209 Query: 215 GISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDREL 274 + + + + +++ Y +D LA L R R ++ + Sbjct: 210 EEERQLKLIFTSYEEWKRQLDLIDYDDMLLEAYQLLKQDENLLAMLQNRFRYVMIDEFQD 269 Query: 275 PLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDN 333 E L VG+ + G Y+L+ F P Sbjct: 270 TNTIQYEIIKLLVQPHRNLMVVGDDDQTIYSFNGARNDYILN----------FEKQFPGA 319 Query: 334 LLHNIQSDILE---LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLH 390 + + + A + + RS P + + E +++ Sbjct: 320 KNIILDVNYRSGSGIVGLGNAVIRHNKQRRSKTLLTAKPHGLPPVYARPGNSDDEADLIV 379 Query: 391 DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD-RRARQSHP 449 + LL +E + RD ++ S R +P+ + Sbjct: 380 NTLLQQ-KEKKGRSFRDFAILFRTASS-----SRAIFDQLVIRQVPFIDYGSGESLYEQW 433 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 V++ I+ L L R + + A+L + + + ++ + +W + Sbjct: 434 VIKPVIAHLRLSIDRRNFDAMEAMLATMYVRPD-----QAMAFIWNEDKKQAKKWPLIHL 488 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 + E + + L+ Sbjct: 489 TR--------------------------------------FPEIKSFHQDKIKERIKLIR 510 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 L L E + D +++ + E ++ Sbjct: 511 SL----EKLKPEAAIRRLRIEFYDQFIEANKSGPALTEHKDSLKEMLDEL--EASAKRFD 564 Query: 630 DAVPLSLLRDELAQRLDQERISQ--RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 DE+A + ++ + + A VN T+ + + F VV + G+++G+ P Sbjct: 565 GITAFLAFIDEIAAKHEEMKRMKLDSSNADAVNFMTIHKSKGLEFPVVFVCGVSEGILPH 624 Query: 688 QLAPLGF-DLMSQKPKRGD---RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF 743 A + + GD + +++R L A+ A+++LYIS Sbjct: 625 SSAITAEKNSDRSAIQAGDNVGEAAMEEERRLAYVAVTRAEEELYISSPAY--YRGKPAA 682 Query: 744 PSVLVQE 750 S + Sbjct: 683 VSSFIIH 689 >UniRef50_A5I1P6 ATP-dependent DNA helicase n=14 Tax=Clostridium RepID=A5I1P6_CLOBH Length = 670 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 48/504 (9%), Positives = 139/504 (27%), Gaps = 92/504 (18%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIY 312 D L + ++ + L + VG+ + G Sbjct: 191 DERILKGYNKLFKYILVDEFQDCDTLQINILQMLSEGNSLFAVGDEDQCIYSFRG----- 245 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA-VAGVNIEEFSRSDNKR--PLDP 369 + + F ++ + +N ++ I+ +NKR + Sbjct: 246 -----SKPECMVDFNHYFKKGEKIYLRYNYRSPKNIVGISKNLIKNNKLRNNKRIEAYND 300 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 D +I + + + E + + +++ +D+ ++ Sbjct: 301 YDKNIVLKSFLNEREQAEEISKIINDIIK--KGYGYKDVAILYRTNME-----SRSLTDL 353 Query: 430 PADRYLPYAISD-RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + +P+ + D +H V ++ + + + + L +++ P I++ Sbjct: 354 FFKKRIPFRLLDKGYNFFNHFVCRDILAYMQVCIDSYDKKSFLKIINKPF----RYISKL 409 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + +R++ + + Sbjct: 410 NVERVRRYKYAKNS-----------------------------------------FDILK 428 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + + + +L + ++N A + + + + + Sbjct: 429 EQKDIQPFQIKNLENLEKDINKMNKMSAQDAIGHIIHNL--GYEEYIKEYSERIKIDKEE 486 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + I + + E + + + + V + T+ ++ Sbjct: 487 LLQIVDELKEAAEEYTSILS--------FLVHVEEVEKEINKKEI-NEDSVILSTIHGVK 537 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + FK V ++ N+G P K + +++R LF + A++ LY Sbjct: 538 GMEFKNVVIVNCNEGNIPYS-------------KADEEVNIEEERRLFYVGITRAKENLY 584 Query: 729 ISYIGRSIQDNSERFPSVLVQELI 752 ++ N E S ++E Sbjct: 585 LTVPKVIRGKNKEN--SNFIKECK 606 >UniRef50_C9A8J1 Exonuclease RexB n=4 Tax=Enterococcus RepID=C9A8J1_ENTCA Length = 1205 Score = 177 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 132/1080 (12%), Positives = 284/1080 (26%), Gaps = 176/1080 (16%) Query: 31 EPEMILVQSTGMAQWLQ--MTLSQKFGI----AANIDFPLPASFIWDMFVRVLPEIPKES 84 + LV + + + + L ++ + + W + Sbjct: 31 QEVFFLVPNYNKFEREREILQLLKEDRVEDFASIRAQVYSFHRLAWFYLQQTGLLSQNAI 90 Query: 85 AFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYR-- 142 N SM + + L L + + + + R Sbjct: 91 TENGASMIMR-----------KLLLELEEELVLYRGEINKAGFIQQLLAFYQEMHTSRLG 139 Query: 143 -PDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIE-TLESA 200 D LA + + + A +++ + + L RF+E +L Sbjct: 140 IEDLLAGGTAPSATQDEEKKYSELAKIFQRFEQELLERALQVEQPITLLTRFLEGSLLDD 199 Query: 201 TTCPPGLPSRV-------------FICGISALPPVYLQALQALGKHIEIHLLFTNPCRYY 247 + +P+ V I G SA Q +Q L K + + R Y Sbjct: 200 SPVEQAMPNAVSMNKAPDLSHALFIISGFSAFSTQEQQLIQVLMKKSHVIIDLFL-DRGY 258 Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG 307 ++ P L R + N + +++ + ++ Sbjct: 259 PQELPSPLNLFYEAGRTYYQLISFARENQVPIYLDQKLSVNQEVDKEAKGSMQQAY---- 314 Query: 308 RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 E++ F T + + QS + + Sbjct: 315 -------------NEIETFWRQTQSQVNYQQQSSVKDF---------------------- 339 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL---TPRDIIVMVADIDSYSPFIQA 424 + +P+ E+ + + M+ + R+I +++A+ + Y +I Sbjct: 340 ------LAVWKVGNPEEEIRQIAASIRGMMSDKKRYPALRYREIQLLIAEPEIYHQYIPK 393 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 +F + +P+ I + + HP++E + + F D+L LL + Sbjct: 394 IF----TEFEIPFYIDEEQMMAQHPLVEFLNAFFACQSYGFRLNDILRLLRTELYLPAAY 449 Query: 485 ITEEG----------LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 +E L + + + G + EL Q L Sbjct: 450 RSEADWLVGRDQFRKLVDITENKALAHDFQGASWTRNEDWELIEYLQSEEEQTDKVDLTA 509 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 Y + + Q V + + L + E L W Sbjct: 510 YTNQLRRAFKQDVADTLDWLTAAR----TNRDAVELLYRFLLNAGVEEQLRHWRD----- 560 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 A + Q ++ E ++ +L D L L+ + Sbjct: 561 -QAIQQGKLDQARNHEQAWQALMDLLDEYAAIYGEESFDFALFEDVLLTGLENVTFGKIP 619 Query: 655 LA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP--------KRGD 705 A VNI L R K+ G+N+ PR++ ++ ++ Sbjct: 620 TAIDQVNINRLDLARPKQAKITFAPGLNETALPRKIENKTLLTNEERQHFNQLFNGEKYL 679 Query: 706 RSRRDD----DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 R + + + F L+SA + L +SY S + ++ + Sbjct: 680 RDTVVEGSVKEPFAFYSVLLSATEHLSLSYAVNFDTQ-QNIKMSPYLDRVVKRLDVPLQE 738 Query: 762 PGDEALNCDES---------EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 G L D ++ P+ ++ ++ EW A+Q Sbjct: 739 RGILTLVSDPRNYVGSYRGLIYQINNLSQQAQKNKENLPRVWEQLKQALLRSEWTDLAAQ 798 Query: 813 A--GKAHSEFVQPLPFTLPETVP-------LETLQRFWAHPVRAFFQMRLQVNFRTEDSE 863 + H PL + + ++ F+ + F L++ R Sbjct: 799 VFESQTHQNIPIPLSQAQAAALYGPSIYSSISQMETFYQCEYKYFVSYGLRLKEREVYGL 858 Query: 864 IPDT-EPFILEGLSRY---------QINQQLLNALVE--QDDAERLF---RRFRAAGDLP 908 P F + L R+ + Q + V+ + + +F R Sbjct: 859 NPAMTGEFFHDALDRFVKVLIAENISLTQLTADQRVQFVEVVLQEIFGESRYRLLTSSAR 918 Query: 909 YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL-----------------ACNGVQ 951 +T + LA + + E+ + + Sbjct: 919 MNFIRYQLGKTIQRVAWALAKQGQKMHFSPEKTEVLFGQIAGSNGINGIELPLSSGGKLY 978 Query: 952 ITGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRF 1008 + G + +V + + E Y + L + + Sbjct: 979 VRGKIDRVDTAKTEEEQWLSVVDYKSSSRDFDLSE--AYYGLAMQLITYLDVALTDAVQL 1036 >UniRef50_B7GM51 ATP-dependent helicase/nuclease subunit A n=1 Tax=Anoxybacillus flavithermus WK1 RepID=ADDA_ANOFW Length = 1209 Score = 177 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 107/968 (11%), Positives = 233/968 (24%), Gaps = 192/968 (19%) Query: 133 DLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQR 192 +D+ LV L + E ++Q + + + + Sbjct: 297 GAYDEQLVEDVKKLRDQVKKEISSITEELFSFQPVTYVRHLHEMKPIVTTIVQMVQRFAH 356 Query: 193 FIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIK 252 ++ + I S L L+ L+A P + ++K Sbjct: 357 LLQAKKDEKG----------IVDFSDLEHYCLRILRA-------------PSLEH--ELK 391 Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE----QDVGNPLLASWGKLGR 308 + ++ + + N D VG+ + +G Sbjct: 392 PSEAALYYRAQFAEVLVDEYQDTNMVQESILRLVSNDDEATGNMFMVGDVKQSIYGFRLA 451 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 + L + F L ++ + + I ++ + Sbjct: 452 EPSLFLQKY------NRFTKDGDGGLRIDLAKNFRSRKEILDGTNFIFRQLMTETVGDMR 505 Query: 369 PLDSSITFHVCHS------------------------------PQREVEVLHDRLLAMLE 398 D + Q E + ++ +L Sbjct: 506 YDDDAALRFGAQDYPDKQIPVECVWINEAKEESDEEEQEDVTAVQLEARWIAKKIKQLLA 565 Query: 399 E-----------DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 E + L RDI+++ + S S + + +P S Sbjct: 566 EPFFVYDRRLKGERRLMYRDIVILCRSMSSASAML-----EEFRKQNVPVYAELSSGYFS 620 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID 507 + +SLL + D+ + + A+L P++ Sbjct: 621 ATEVSIMLSLLKVIDNPYQDIPLAAVLRSPIVGLD------------------------- 655 Query: 508 DDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567 L + G + L EL + Sbjct: 656 ---------------------EEALARIRLAKKDGAFYEALCAFVQEPHDDELHEKMKRW 694 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 L L+ WR Q+ + + R+ ++ + + Sbjct: 695 LASLSEWRTAARQKPLADLIWQLYRETNFYDYVGGMPGGKQRQANLRALYDRAKQYEQTS 754 Query: 628 YGDAVPLSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG-- 683 + + L +R D S V + T+ + + F VV L G Sbjct: 755 FRGIFRFLRFIERLKEREDDFGAARSLTEQEDVVRMMTIHKSKGLEFPVVFLAGAAKSFN 814 Query: 684 --------------------VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISA 723 V+P A K+ ++ + AL A Sbjct: 815 MQDLRSDYVLDKDFGLGMRFVHPTWRASYPTVAQLAIKKKMKWQLLAEEMRILYVALTRA 874 Query: 724 QQKLYISYIGRSIQDNSER-----------FPSVLVQ------ELIDYIGQSHYLPGDEA 766 ++KLYI + ++ ++ P+ +++ + I Y H + Sbjct: 875 KEKLYIVCTAKDMEAKKKKWQEVAYTSTWELPAYVIEKAKSYADWIGYALARHQQGICSS 934 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA--SQAGKAHSEFVQPL 824 + H+ H D Q + + ++ P A S+ + + + Sbjct: 935 ATVLHDPSLWDIHIVPAHELEQEDAQANEHRDIVEAIQQLQPVAIKSEYEEEVNRRLFWT 994 Query: 825 PFTLPETV-----PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 P TV + L+R + + + ++ R Sbjct: 995 YTHAPATVLRAKQSVSELKRQ-RDIYGGHAEQPFRKELVERPRFLQAK---MMTPAERGT 1050 Query: 880 INQQLLNAL-----VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEM-----QQLAD 929 + ++ + V D R L I E+ +++ Sbjct: 1051 MMHLVMQHVDVTKEVTVDAVREQIARMVNGEWLTEEQATVIDVESIVAFFNTPIGKRMQR 1110 Query: 930 RVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQG--MQLWLEHLVY 987 R+ + ++ V + G + V D + M + L Sbjct: 1111 ATRLEREVPFYLAHEMEGETVVVQGVIDCVFEDEHGLVLI-DYKTDRVSWMNDPKQQLKR 1169 Query: 988 CASGGNGE 995 G Sbjct: 1170 RYKGQLAL 1177 >UniRef50_A7IDD4 UvrD/REP helicase n=3 Tax=Proteobacteria RepID=A7IDD4_XANP2 Length = 1143 Score = 177 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 108/908 (11%), Positives = 222/908 (24%), Gaps = 157/908 (17%) Query: 142 RPDWLAQWETGHLVEGLGE--AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLES 199 R D +A E L A + + +V + A R+ + Sbjct: 306 RSDAIAVLEEILPTLPLVHYRNLWDPAMVLRDIVAAISRAKDELADPA----RYRALAQG 361 Query: 200 ATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL--LFTNPCRYYWGDIKDPAYL 257 +R+ + +Y QAL KH + L P R D A Sbjct: 362 MAAEAVDEEARIAAAKCLEIADIYDLYEQALRKHGGVDFGDLIMRPARLLETD---EATR 418 Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIYLLSD 316 + R R ++ + + + + + VG+ + + G ++ Sbjct: 419 IAVQLRHRHVLVDEYQDVNRASARLLKLVAGDGERLWVVGDARQSIYRFRGASSENMVR- 477 Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN-------KRPLDP 369 F P + + + + + V + + + + Sbjct: 478 ---------FGRDYPGAAVDQLGVNYRSTDQIVRSFVAVAPRMGASHGMLALALEADRGA 528 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 S + E L + + E + RD V+ +A Sbjct: 529 APSRPEICRFETLDDEAAGLAASIREL--EGAGVRLRDQAVLCRTNGRL-----NEIAAA 581 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 R +P + + + LLSL F ++ + +P R+ ++ + Sbjct: 582 LEARGIPILHLG--SLFEREEVRDLLCLLSLAVDPFGD-AIVRVGAMP----RYGLSLQD 634 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + + + G + Sbjct: 635 AYCVSRHLRSIGKPA---------------------------------------LAGLAE 655 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + GL + L L R + L +L D+ D+ T Sbjct: 656 ASAAPGLSTAGRAGVERLAADLAGLRANASAWDFLATYLLDRTDLAKQLSQADSLTAQMR 715 Query: 610 TL-IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA----GPVNICTL 664 + I Q + + +L ++ + Q A V + T+ Sbjct: 716 AVAIWQFLNFVREQVPVGGGLPIQRTLDRVRQLVLLAEERDLRQVPAAALHLDAVRLMTV 775 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK---------RGDRSRRDDDRYL 715 + + F+ V + G+ +P + R+ D++ L Sbjct: 776 HGSKGLEFEAVHIPGLTVASFPSSNRGQRCPPPRGMVEGAGDLSPADEAKRAHDDEEECL 835 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 F AL A+ L + Y R ++ S R S + + + P Sbjct: 836 FFVALSRARTHLRL-YHARKQRNGSGRSASPFLGWIPATLLDEISNP------------- 881 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLE 835 P A + + + +V Sbjct: 882 --------------------------------PTLPLPAGASTSQPIAIAWPADWSVTDS 909 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE 895 L + P R F+ L + + + T + L Y + + L + + Sbjct: 910 RLGSYEKCPRRFFYTHVLGLGGARKPTAFSRT----HDCL--YDLLRWLADTRRTAEPTV 963 Query: 896 RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ-----PGQSMEIDLACNGV 950 G F + +L ++ Q + ID V Sbjct: 964 ADAESAFEKIWGTRGPTDHAFAADYRRLASRLIGALVRSGAGRRFREAQPLAIDFPNGRV 1023 Query: 951 QITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPP 1010 + ++ + + L Y ES+ + Sbjct: 1024 VVE--PNELAELPDGTVVIRRVRTGHKRSDEYDRLEYTLYHLAAESQ--FGGRAVVQALH 1079 Query: 1011 LAAEQALH 1018 L E A Sbjct: 1080 LTDETAEA 1087 >UniRef50_Q04T32 ATP-dependent DNA helicase n=4 Tax=Leptospira RepID=Q04T32_LEPBJ Length = 665 Score = 177 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 55/504 (10%), Positives = 133/504 (26%), Gaps = 96/504 (19%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIY 312 P L + + ++ + + A L + VG+ + G Sbjct: 207 PGVRNALSEKYKFIMVDEFQDTNKVQAHIACLLASEHSNLMVVGDDAQCIYTFRGASVRG 266 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILEL---ENRAVAGVNIEEFSRSDNKRPLDP 369 +L F + + ++ + N A A + + Sbjct: 267 ILD----------FPKIFSNTKTIFLEKNYRSTTAILNLANAVLQNFSEKYDKYLFTDNE 316 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 S E E + + LL +++ + + + V+ + + Sbjct: 317 NGSIPNVLQFEDELEEAEGIAEILLQ--KKEDGIPFKKMCVLFR-----AGWNSNQLELV 369 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 A R +P+ R ++ +S L + + S + + L I Sbjct: 370 LAKRNIPFVKFGGRKFIETAHIKDLLSFLKVLVNPLDSVSWIRV-----LKLIPGIGNSK 424 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + + +S + E+ + + P Sbjct: 425 ANGILDKIRKSSGSF----------------------------EVLLGENETAIDKYISP 456 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 E + + + R L + + Sbjct: 457 LYHLYQKHRETYSEVKKVTSDFIDYYRVL--------------------LEKNYDDSKRR 496 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + + +++ L L D + LD+ + +N+ T+ + Sbjct: 497 S---EDLDSVLGFSLKYTSLGDFLSDLTMDHASLSLDKIK-PDDAETDLLNLSTVHSAKG 552 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F +V +L +GV+P +++R LF A+ A+++LY Sbjct: 553 LEFDLVFILNATEGVFPSSKNTDT----------------EEERRLFYVAITRARKELYF 596 Query: 730 SYIGRSIQDNSE--RFPSVLVQEL 751 + + + S + E+ Sbjct: 597 TRPSLAHSRSGPYYTKLSRFLSEI 620 >UniRef50_C6Q0I3 UvrD/REP helicase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0I3_9CLOT Length = 736 Score = 177 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 54/504 (10%), Positives = 148/504 (29%), Gaps = 92/504 (18%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 +++P L + ++ + E L + VG+ +G G Sbjct: 253 LENPQLLEAYKKLFKYLLVDEFQDCDGLQIELLQMLGENSSIFAVGDEDQCIYGFRG--- 309 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPL 367 + F + + +Q++ EN I + S Sbjct: 310 -------SRPDCMVNFNEYFKNGKKIFLQTNYRSNENIVDISKKIIVGNKNRNSKIIEAN 362 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 I F +++ + + + E++ + D V+ + Sbjct: 363 KKTKGIINFFNLSDERQQALSICKTIENLCEDN-SYNLEDFAVLYRTNLENRSIV----- 416 Query: 428 SAPADRYLPYAISDRR-ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 + +P+ I D++ H V I+ L L E +++ P ++ Sbjct: 417 DLMLKKEIPFKILDKQYNFFEHFVCRDLIAYLKLSLDITDKESFGRVINKPF----RYVS 472 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + + +++ + + + ++ Sbjct: 473 KVHIEKVKKNI-----------------------------------------NKESCFKI 491 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 ++ ++ + + L + +++LN L + L L + + E Sbjct: 492 LMEIEDLPIFQIKNLERLENDILKLNKM--------SLRDALNFITKDLGYYDYIN-EYS 542 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + + ++ + +I E + + + ++ + + + V + T+ Sbjct: 543 ERLKMESRELKDVIEEFKASASDYGSIIP-FLAHIEDVEEKLKNKSKEDS-GVILSTIHG 600 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 ++ + FK V ++ N+GV P + +++R LF + A Sbjct: 601 VKGMEFKNVFIINCNEGVIPHINSI--------------PKNVEEERRLFYVGVTRAIDN 646 Query: 727 LYISYIGRSIQDNSERFPSVLVQE 750 L + ++ S ++E Sbjct: 647 LTLY--STNMFKGKSAHMSRFIEE 668 >UniRef50_C2BHK2 Putative uncharacterized protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BHK2_9FIRM Length = 1115 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 85/759 (11%), Positives = 233/759 (30%), Gaps = 98/759 (12%) Query: 319 SSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHV 378 S++ D F +++ L + V ++ + P + +I + Sbjct: 245 SARTFDLFRQDFESEVIN------LPSNPKTVDLDHLRINFETYRPAPFEKNPENIKIYE 298 Query: 379 CHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 S + EV + + +++ +P + +D+ V + D D Y + F +P Sbjct: 299 SISTKSEVTNMALLINKIIKTNPDIRYKDMAVYLTDPDQYENELIKTFSRY----EIPIF 354 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 + RR + +++ F++LL L + F ED+ +L+ ++ I+++ L ++ Sbjct: 355 LDKRRKMADNHIIKTFLALLRLKVNNFRQEDLFYILNSKLIG----ISDKDANALINFLT 410 Query: 499 ESGIRWGIDDDNVR-ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 I+ + +++ ++ ++ + E + + Sbjct: 411 YRKIKGSMFENDKYFAMDEDFYEKNLVNDPKKDEKIAKKREEYDHVNLVRAKILHLTKGL 470 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 + + L ++ ++ + + + D + I ++ Sbjct: 471 DKKNMTVKDLATKIFKMIADSDIKKSINAFQAKLLE------NADLDDYKENEQIWDEFV 524 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVC 676 AI+ + + ++PLS + + +I + + + R K+ Sbjct: 525 AILDQLVLLMGDRSLPLSRVVTIVEAVTRDIQIGLIPPSKDHLIVTDFARDRVSNKKINI 584 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGD---------RSRRDDDRYLFLEALISAQQKL 727 LLGM+D +P Q A + + + R + + + KL Sbjct: 585 LLGMDDAYFPSQKAKDYLISPDEMEELEKAKIDLKLYAKDRDRAELLSLYKIISR-SDKL 643 Query: 728 YISYIGRSIQDNSERFPSVLVQELIDYIGQSH--YLPGDEALNCDESEARVKAHLTCLHT 785 SY ++ + S++++++ + L A + + +K + + Sbjct: 644 IFSYALSD-KEGKDLNESLVIRDIRKIFPKLKKNILLDPRAEDAIFARESLKKYTLAVLN 702 Query: 786 RMPFDPQNYQPGERQSYA-REWLPAASQAGK------------AHSEFVQPLPFTLPETV 832 ++ + ++ + A E+L + + ++ L L + + Sbjct: 703 KLANKEKITDKDKQIATAFMEYLRENQEKDENKLTYDKVKKGLFYTNDKLALADELRKVL 762 Query: 833 P------LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN 886 + ++ + A P + F L+ + E F ++ L I + Sbjct: 763 YKKHAYSVSEIETYSACPYKHFIAYGLRPDVEKE---------FDVDALDIGNIVHKSFE 813 Query: 887 ---ALVEQDDAERLF--RRFRAAGDLPYGAFGEIFW-----------------ETQCQEM 924 L++ D + + + + E + + Sbjct: 814 DLSRLIKDMDLDEVDFSEIDKLLDEKFNEGIDENLDSTRKDSPKNKYILKNINQAAKRNT 873 Query: 925 QQLADRVIACRQPGQSMEIDLACNGV----------QITGWLPQVQPDGLLRWRPSLLSV 974 +Q+ D++ + E G + G + ++ R Sbjct: 874 RQIVDQLKRGDFKLEYFEQAFDKGGFFDPVYVDEENYLRGRIDRID-MAGNLVRVIDYKT 932 Query: 975 AQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAA 1013 + + + + D + P+ A Sbjct: 933 GS--KAFNLAAILNGKDLQLIIYMIAVSDDKKNLEPIGA 969 >UniRef50_A9H0P3 UvrD/REP helicase n=3 Tax=Alphaproteobacteria RepID=A9H0P3_9RHOB Length = 868 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 74/704 (10%), Positives = 166/704 (23%), Gaps = 111/704 (15%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFIC----GI 216 Q L K LV + A I+ +++ P +P+ G+ Sbjct: 137 DTDDQLRLLKQLVSAESIDDKRW--PARQLASIIDGWKNSAFTPEKVPTADAGAYNHKGV 194 Query: 217 SALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL 276 + ++ LL D+ ++ + Sbjct: 195 KLYAQYQRRLIELNAVDFGDLLLHMVTIFQTHDDVLKQ-----YQRWFAYILVDEYQDTN 249 Query: 277 FRDS-ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLL 335 VG+ + +G G + +L F P + Sbjct: 250 VAQYLWLRLLAAGHKNICCVGDDDQSIYGWRGAEVGNILR----------FEKDFPGAHV 299 Query: 336 HNIQSDILELENRAVAG---VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR 392 ++ + + A + E I + E + + Sbjct: 300 VRLEQNYRSTPHILAAASGVIEGNEGRLGKTLWTAADEGERIRLIGHWDGEEEARWIGED 359 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV--------------FGSAPAD------ 432 + L + + + ++ V Sbjct: 360 I-EALCDGSSYLAKR-----RQNSRSQQIMEEVKRLDNNDALLGLNSIEQLLERLKQHES 413 Query: 433 -----------RYLPYAISDRRAR------QSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 L + + + + + + + L Sbjct: 414 FLSKEKNRDLLWELTTRQQEGLSLEPVFLRFNSEEIAILVRASHQMRAFEDRFLTIGLPY 473 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 + RF E + D+++ + T + + + Sbjct: 474 RVIGGPRFYERME-----IRDAMAYFRVVVSPDNDLAFERIVNTPKRGLGDKAQQTIQVT 528 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE---------- 585 A + ++ + + L L+ ++ W L Q + ++ Sbjct: 529 ARANGVSLFEGARLAVAQGLIKGKGGTELRKLVEGIDRWIAMLHQRKHVDGDVVIDDGGE 588 Query: 586 --------EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 E V D E + + ++ + L Sbjct: 589 GALAFSHIELAEVILDESGYTTHWQNEKTPEAPGRLENLKELVKALENFE-----NLQGF 643 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 + ++ +D E V+I TL + + F +V L G DG++P Q + L Sbjct: 644 LEHVSLIMDNESDDGGA---KVSIMTLHAAKGLEFPMVFLPGWEDGLFPSQRSMDESGLK 700 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYI 755 +++R L + A++ IS++ + PS + EL Sbjct: 701 G----------LEEERRLAYVGITRAEEVCTISFVSNRRVFGQWQNAMPSRFIDELPQAH 750 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER 799 + PG + R H + P + R Sbjct: 751 VEVLTPPGLYGGGYGAAAPRSTLHDQAAEANVYNSPGWRRLQAR 794 >UniRef50_B9R0C3 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R0C3_9RHOB Length = 1046 Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 134/1028 (13%), Positives = 249/1028 (24%), Gaps = 142/1028 (13%) Query: 90 SMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQW 149 +M+ +M L L + L+ L D+ D W Sbjct: 110 AMTRLVMAWKGALRREALALRSDEPLGLPASTADAAWLAGDLLTLMDEVETEEAD----W 165 Query: 150 ETGHLVEGLGEAQAWQAPL-WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLP 208 + A+ WQ L + +V+ + + R + P Sbjct: 166 SELAGLVPDDHARYWQITLDFLKIVQEAWPAHLAELGKMDPKARRSALIRREAQRIAATP 225 Query: 209 SR--VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRR 266 + V + G++ P + L+A+ G I P L R Sbjct: 226 PKGPVIVAGVTGSVPATAELLKAVAGLE-------------QGVIVLPGLDLDLDDRSWE 272 Query: 267 HSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAF 326 + S+ S Q LL G D L Sbjct: 273 ALGQRFVTGTRHGSDTKTPPPLSSHPQYSLKQLLDRLGVTRADVRAL------------- 319 Query: 327 VDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREV 386 P ++L Q + E A + + ++++ + E Sbjct: 320 --DDPGDILSQRQRLVSEALRPADTSDGWTSYLDATPIEVRSAALNNVSLMTARNEADEA 377 Query: 387 EVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 L L +E T ++ D + + A + S R Sbjct: 378 LSLAIALREAIELGETA-----ALISPDR-----MLTRRVAAELARWNIQADDSAGRPLD 427 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 I L + D+LALL P+ AR + + +R + + IR Sbjct: 428 QTAPAILTILAAKLALNGCEPIDLLALLKHPL--ARLGLPIKDIRAAARALERGVIRGER 485 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 L + E + +S+ Sbjct: 486 PRPGTDGLIMAVEACRAAAENAHTPRWKKVHEGDWDVIADLAARLQSALAP--------- 536 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE--TEAAMTLIEQQWQAIIAEGL 624 L + R + E ++ + V + + E A + W ++ Sbjct: 537 -LENMAGDRDPVPVEHLVQAHVDVMQAISADETGAADELYAAEAGEALAAFWSGLLEAEA 595 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 + L + V I M R F V L G+N+G Sbjct: 596 SGLAVPPHEWPSVLSALMSG--DAVRRRLPRDPRVQILGPMEARLQAFDFVILGGLNEGT 653 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ----QKLYISYIGRSIQDNS 740 +P++ + K G +R L A AQ +++ +S R D + Sbjct: 654 WPQRTRNDPWLNRPMKRDMGLEPP---ERRLGAAAHDFAQGMGAKRVLLSRAAR--ADGA 708 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 S +Q L G + N A + Sbjct: 709 PTVASRWLQRLTTLAGPEIAAGMEARGNRYSQLAALLDR--------------------- 747 Query: 801 SYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTE 860 A A +P P+T+ + ++R P F + L++ Sbjct: 748 --------QAGDVRPADRPAPKPPLGARPKTLSVTEIERLVRDPYAIFARHSLELQPVDP 799 Query: 861 DSEIPDTEPFILEGLSRYQINQQLLNALV-------EQDDAERLFRR--FRAAGDLPYGA 911 P + + L + ++ L + A Sbjct: 800 IGGEP-------GAADKGNLIHDALAEFLSTWTGPFDETAVTALLEIGEELFEPLDAFPA 852 Query: 912 FGEIFWETQCQEMQQLADRVIAC--------RQPGQSMEIDLACNGVQITGWLPQVQPDG 963 ++W + + + G +E+ L ++ G ++ Sbjct: 853 IRALWWPRFQRIAEGFVAFEAKRSLHVEKRFLEIGGGVELKLPGLDFRLRGRADRIDLMS 912 Query: 964 LLRWRPSLLSV------AQGMQLWLEHLVYCAS-------------GGNGESRLFLRKDG 1004 Q L L A+ GE K G Sbjct: 913 SGSLSVIDYKTGQVPSQKQVDALLSPQLPLEAAMIQRGGFKDVPAGDPVGELLYLQLKGG 972 Query: 1005 EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTL 1064 + L +LIE + + + + +L Q + L Sbjct: 973 TDAVLEVGRNPKDAALEELIEDAWQRLEQLIAHYAKEETGYLSRARVMQGRQIDGPYDHL 1032 Query: 1065 QKARTKFL 1072 +A+ L Sbjct: 1033 ARAQEWAL 1040 >UniRef50_Q6BW47 DEHA2B14410p n=3 Tax=Saccharomycetaceae RepID=Q6BW47_DEBHA Length = 934 Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats. Identities = 96/736 (13%), Positives = 208/736 (28%), Gaps = 92/736 (12%) Query: 64 LPASFIWDMFVR-VLPEIPKESAFNKQS---MSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 L + + + + P+ + F K++ M +L LL + D L+ + + Sbjct: 49 LISRVAYLLIKEKLSPQCIIVTTFTKKAANEMIERLGELLKDTPIKVDKILIGTFHSICY 108 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 K++ K A Y + Q +++ + + L E Sbjct: 109 RIIKIYG--KKIA--ISDYNIADERDSKQILEEMIMKLSETDLKYISELPDRQTEIFKSN 164 Query: 180 GQPRWH---RANLYQRFIETLESATTCPPGLPSRVFICGISAL-PPVYLQALQA--LGKH 233 + + +R I L+S+ P R L Y + LQA L Sbjct: 165 KEDDKYHGWDPKKIRRQISKLKSSGIQPDAYEQRSDCNQFLGLLYKRYQKHLQANSLLDF 224 Query: 234 IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD--- 290 + + Y +L ++ + + + Sbjct: 225 DDCLICCHQLITTYP-----------VLNFVEHVLVDEFQDTNEIQLQLMYEFAKGHPTN 273 Query: 291 -----GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL 345 VG+P + + I E +++ + ++ + Sbjct: 274 PRLQNNITIVGDPDQSIYAFRDAQAINFKKMKEHYKKIY----QDNSINVITLEENYRST 329 Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSS---ITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 + I + L S + SP++E + ++ ++ + Sbjct: 330 SDILNFSEKIMRQQDDRLSKTLKSQMVSSFRPVYSNLKSPEQEARWISYQIEHLMALPNS 389 Query: 403 L-TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 + +DI V+V + + + +PY + A + + A + L + Sbjct: 390 IFKYKDISVLVRS-----AYQTRTIENEFVRKRIPYVMVRGTAFWNRKEVVAILDYLRVI 444 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 S L ++ P + I E+ L + + I+ I V + + Sbjct: 445 ASDNDRIAYLRTVNFP----KRGIGEKTLASISAELEMEAIKPDIYKRQVYSVLQDISNV 500 Query: 522 H------TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW- 574 + + + LG+ + E + +LL +L Sbjct: 501 NTSVKLTSKNQSSLKKYLGFIADMRDILEDVNKISYEEQVGSDSTIEKRNTLLSKLFELV 560 Query: 575 ------RRGLAQERPLEEWLPVCRDMLNAFFLPDAE--------TEAAMTLIEQQWQAII 620 ++ + E + + L F D E + I Sbjct: 561 YVKSGLQKEFQNDPNHELNIMEVQTQLCEFTPKDEELPLYLGGSESDITEDKRNFLEKFI 620 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 + ++ R R G V + T+ + + + +V + G+ Sbjct: 621 QSIGLYETDSTNEKE------KEKEIALRFPGRIDKGKVALSTIHGSKGLEWPIVFVPGL 674 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI-SYIGRSIQDN 739 +DG+ P + A G +++R F A + LY+ SYI + Sbjct: 675 SDGILPAKFAMDT----------GGEEAVNEERRCFYVATTRTKLLLYMSSYIEQGDIGK 724 Query: 740 SERFP----SVLVQEL 751 R P S + L Sbjct: 725 WGRKPIDSVSRFISNL 740 >UniRef50_A6W770 UvrD/REP helicase n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W770_KINRD Length = 1098 Score = 175 bits (444), Expect = 7e-42, Method: Composition-based stats. Identities = 106/844 (12%), Positives = 224/844 (26%), Gaps = 95/844 (11%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIY 312 +P LA R + +D + +P + G G D Sbjct: 248 EPELLAAERARWDLVAVDDAHDLSEAALRLLEVVAGGRDLVLATDPDSVTQGFRGADART 307 Query: 313 LLSDLES--------SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK 364 + + + D LLH + + + + + Sbjct: 308 AAELADRFGPRPGVGATTVVLGTDHRQRPLLHAVSRAVST----RIGALGGAPQRAARPA 363 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 + + V S +E + RL D + + V+V + ++ Sbjct: 364 PEVAVERGRVEVAVLASATQEASWVAQRLRRRHLLD-GVPWSQMAVVVRSAGHTAALRRS 422 Query: 425 VFGSAPADRYLPYAIS-DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 + A +P A+ + P + +S L++ +D A V Sbjct: 423 L-----AAAGVPLAVPLAEVPVRDEPAVRPLLSALTVVLDPAALDDAAARELVTSPLGGA 477 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE 543 D+ +E G D V L + + Sbjct: 478 DVVALRRLRQSLRRSELAAGGGRTSDAVLTSALAGALAAPATDLAAATGDLALLGADDPA 537 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 + + A+ + W Sbjct: 538 LGPAVRVALVLQAGRRALAAAAAGTSAETVLWHLWDASGLAARWQRAALAGAVVEGADAG 597 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL--AQRLDQERISQRFLAGPVNI 661 + + + ++A + D+L A+ + AG V + Sbjct: 598 RADRDLDAVLALFEAAGRFEDRFPGAGSA--RRFLDQLMAAEVPSDTLADRAPDAGAVTL 655 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD----------LMSQKPKRGDRSRRDD 711 T + +V + G+ +GV+P R+ +D Sbjct: 656 TTPQGAVGREWDLVVVAGVQEGVWPDLRLRGSVLGAQALVDVLQGRDPDGPGARRAVLED 715 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 + LF A+ A+++L ++ + + + PS + + D G +E Sbjct: 716 ELRLFHVAVTRAREELVVTAVR-----DEDERPSAFLDVVADAAGLRTRADEEEEPGLAT 770 Query: 772 SEARV-KAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL------ 824 V L ++ P + +R++ A L + AG A ++ + Sbjct: 771 VPRAVSLPALVARLRQVVCAPDAVETPQRRAAAAARLAELAAAGVAGADPSEWYGVQELT 830 Query: 825 ------PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRY 878 V ++ F +R E P G + Sbjct: 831 DDGALRGPGEEVPVSPSRVESFERCGLRWLL-------------ESSGARPGDSTGQAIG 877 Query: 879 QINQQLLNALVEQDDAERLFRRFRAAGD--LPYGAFGEIFWETQCQEMQQLADRVIACRQ 936 + ++ + E D E R LP G E + + +LA+ R Sbjct: 878 NLVHRIASEAPEADAFELRRRLDLLWPTLGLPDGWVAETARARALRMVDKLAEYHRDARA 937 Query: 937 PGQ-----SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL------WLEHL 985 G+ +++D+ ++ G + +++ D R L + + Sbjct: 938 EGRTLVGVELDVDVQVGRARVRGRVDRLERDAEGRAVVVDLKTGKVQPSRAEVERSPQLG 997 Query: 986 VYCASGGNGE------------SRLFLRKDGEWRFPPLAAEQALH------YLSQLIEGY 1027 VY + G + ++ G + P+ ++AL + + L+ Sbjct: 998 VYQLAAQEGAFPAPPTGPTGTGGAVLVQLGGTQKKAPVQHQRALDEDDDPGWAADLLARA 1057 Query: 1028 REGM 1031 EGM Sbjct: 1058 AEGM 1061 >UniRef50_Q2S575 ATP-dependent DNA helicase n=2 Tax=Rhodothermaceae RepID=Q2S575_SALRD Length = 712 Score = 175 bits (443), Expect = 9e-42, Method: Composition-based stats. Identities = 64/570 (11%), Positives = 148/570 (25%), Gaps = 93/570 (16%) Query: 216 ISALPPVYLQALQALGKHIEIH---LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDR 272 ++L A ++ + H R D ++ +R R ++ Sbjct: 188 FTSLHAELKALRDAYRRYKKEHGLMDFDDLLERTLELLETDDDVRHQVASRCRHVLVDEY 247 Query: 273 ELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTP 331 + +E + + VG+ + + G D+ + F D Sbjct: 248 QDTNALQAELVKKFSSVHGNVTVVGDDAQSIYKFRGADFRNIFR----------FPDEFD 297 Query: 332 DNLLHNIQSDILELENRAVAGVNIEEFSRS---DNKRPLDPLDSSITFHVCHSPQREVEV 388 D + ++ + + + E + E Sbjct: 298 DTEVVKLEHNYRSTQPILDLANRVIEQAERSYDKTLFTEKTEGELPALVPAADGDMEARF 357 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 + + +L + + + D+ V+ R +P+ Sbjct: 358 VAEMVLRL--REDGVPLSDVAVLFRS-----SHNAYDLEVELNQRNIPFVKYGGMKLNEA 410 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 ++ ++ L + ++ + L I + + L +W E+ Sbjct: 411 AHIKDVLAHLKVVENPQDAASWNR-----ALQLIHGIGPKTAQSLIEWTTEAA------- 458 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 + L + + L L Sbjct: 459 ------------------------------------EDPLTLGDGAPFSDRYAARLKQLF 482 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 L R E+ + F A+ + + A Q Sbjct: 483 STLRHVRSD--DTSVTEQVEAILDYYQPLFENKYADDHPKRAPDLEHLAGLAANHESRQR 540 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + + L + + + T+ + + F V L+ DG P + Sbjct: 541 FLSSLTLDPIE-LTALDQETGEDDEPP---LVLSTIHSAKGLEFHTVFLIRALDGTIPSR 596 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE---RFPS 745 A + D++ LF A+ A++ L+ISY + PS Sbjct: 597 HA------------LREPGGVDEELRLFYVAVTRAEEGLFISYPMTQYRRGQGEYMTTPS 644 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEAR 775 V++L D + + L ++A++ + +A Sbjct: 645 RFVEDLPDDVLEPVQLVEEDAVDENAPDAP 674 >UniRef50_D1U5K5 UvrD/REP helicase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5K5_9DELT Length = 715 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 53/558 (9%), Positives = 131/558 (23%), Gaps = 112/558 (20%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYI 311 + +L TR R ++ + + G L VG+ + + G + Sbjct: 206 NEPLRNQLRTRYRYIMVDEYQDTNLVQARIVGHLAGERGNVMAVGDDAQSIYAFRGANVA 265 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLD 368 ++ F + + ++ + ++ I + Sbjct: 266 NIMD----------FPKIFEGTKIIRLEKNYRSVQPILDLTNEILSGAAIKFDKHLYSDL 315 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 D S Q + + + +L + D+ V+ + + Sbjct: 316 KSDVLPQVVYPLSDQTQARLTVEHILDL---GRKYALHDVAVLFR-----AGYQSFPLEV 367 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A L Y ++ ++LL L + + I + Sbjct: 368 ALTRVGLDYQKFGGIRFHEAAHIKDVLALLRLVVNPHDLMAWQR-----AVEHVKGIGPK 422 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + + + ++ ++ Sbjct: 423 TVARIYRAMHTDDAKY-------------------------------------------- 438 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 I + L LL +L+ R + + E + + + Sbjct: 439 -----MATITKKHDELRELLNELDGLRAMAGRPSAILERILAFYQPI--LIDKYPDDYPK 491 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 +Q I LD + ++ V + T+ + Sbjct: 492 RQAGLEQLGQIAHNYTDMDQLLG----------DLSLDGDPDDEKRKENAVVLSTIHSAK 541 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + + V ++ + + +P + +++R L A A++ L Sbjct: 542 GLEWSAVIIIDLVEERFPS------------RKAMQRPEDLEEERRLMYVACTRAKECLT 589 Query: 729 IS-----YIGRSIQDNSERFPSVLVQELIDYIGQSHYL------PGDEALNCDESEARVK 777 + Y +S + PS V EL + ++ S Sbjct: 590 LFVPSSVYNRQSGISD-PTLPSPFVLELPSTVFTPLKESYGGSLEKRWPVDSRPSFGTAA 648 Query: 778 AHLTCLHTRMPFDPQNYQ 795 P + Sbjct: 649 KSAVREQDAQPVQARPAA 666 >UniRef50_A6VFA5 UvrD/REP helicase n=2 Tax=Methanococcus maripaludis RepID=A6VFA5_METM7 Length = 946 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 82/705 (11%), Positives = 185/705 (26%), Gaps = 88/705 (12%) Query: 71 DMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL---FQL 127 + + + K + E LR L D + ++ Sbjct: 43 YLVEELGYDPNKLLVVTFTIKA-----------ADELKDRLRKRLGDRVETMQISTIHSF 91 Query: 128 SSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRA 187 + ++F +Y Y + +E ++ ++ + R Sbjct: 92 CQRMLEMFPEYHNYG----SVFEVMDELDQFIYVDNN----YRGFGLNGIEERLETGKRI 143 Query: 188 NLYQR---FIETLESATTCPPGLPSRVF----ICGISALPPVYLQALQALGKHIEIHL-L 239 + F L P L + + L Y L K L Sbjct: 144 RFVDKLTNFYNLLTENDIDPIALKTYYSGKRSLKTEELLTESYEYYEAELDKTDPKKLDF 203 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNP 298 ++Y + + L + ++ + + VG+ Sbjct: 204 AMLQKQFYHMLLNNEDALNSVREMFDYIFVDEYQDTNPIQDAIIRLIAEPKFNITVVGDE 263 Query: 299 LLASWGKLGRD---YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 + +G G + L +++ + ++ + E A Sbjct: 264 DQSIYGFRGASVENFRQFLERYSGPEKIK--------AHMIKLEENFRSPEEIVDAFDKF 315 Query: 356 EEFSRSDNKRPLDPLDS--SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA 413 R+ K+ + V SP+ E + + + ++ + + DI V+ Sbjct: 316 MGPHRTFEKKIISKNGHYSDPVLIVSESPEEESIKIAEWIEKLITKH-NVDYGDIAVLFK 374 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 + +++ +R +PY + + P + + I ++ + ++E V Sbjct: 375 SVRNHAN----ELVDELMERNIPYVVYGDSSLIDQPEIRSVIHAMACINEYELNEKVSRN 430 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 + L + + L + V + R Q + ++ Sbjct: 431 RKLMSLLDYDILGSDLLNLDEKTVEKLDYRGEPHKFCDVYNYEGLKNQGIATKDIDTLIN 490 Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD 593 + + + ++ L L Sbjct: 491 IKNIRNK-----------DVKKPQLDIFYELMDATGYLRRL----------------FEA 523 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ--ERIS 651 + +AE ++ I+ + L + D E + Sbjct: 524 SKDEADKYNAEKAELQLKNLAKFTTILEKFKKNTGS--NSFKSFIYLLTKIPDNKLEDAA 581 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 V I T+ + + F VV L G+ + Y A + ++ D Sbjct: 582 SPEGQDVVKIMTIHQAKGLEFPVVVLGGVTERRY-GARADDRLVNIPKQFMMNKHDVDFD 640 Query: 712 D--RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 + R +F + AQ+ L IS D R S + E+ DY Sbjct: 641 EEVRRVFYVGMSRAQKLLTIS-----AIDGRNRKMSKFIGEIGDY 680 >UniRef50_Q1NRJ1 UvrD/REP helicase n=3 Tax=Deltaproteobacteria RepID=Q1NRJ1_9DELT Length = 775 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 61/533 (11%), Positives = 135/533 (25%), Gaps = 85/533 (15%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDY 310 D +L R + ++ + +E L VG+ + + G D+ Sbjct: 232 DDREVREELAQRFQAILVDEYQDTNPIQAEIVRLLAAQRRNVMAVGDDAQSIYSFRGADF 291 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV---AGVNIEEFSRSDNKRPL 367 ++ F D P + ++ + + A + Sbjct: 292 RNIME----------FPDHFPGTRVVRLEENYRSIPQILEVGNAIIAPAPVKYPKKLFSR 341 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 S FH + + + +++ + E L I V+ F Sbjct: 342 LEGGSRPLFHAARNESEQARFVVEKIKELRRE---LDASQIAVLFRS-----GFHSYKLE 393 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + + ++ ++ + + L +L I Sbjct: 394 LELTANGIDFEKRGGLKLTESAHIKDVLAHFRVLCNPAD-----RLSWHRLLLLLDKIGP 448 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + + + G D + Sbjct: 449 KTAARIIDRLPLLEQVAGPGDGQRPLDGSL----------------------------AA 480 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 L + E + L LL +N P E V + Sbjct: 481 LKAFPAGKAWGEGMQKLLQLLADIND-----PGLAPAELLEQVLIYYQPLLRRLYPDDYP 535 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 +Q + ++A ELA + G + + T+ Sbjct: 536 RRQRDLEQLRPLLAGYESMD--------DFLAELALDPSSPEVDDD-GGGRLVLSTVHSA 586 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + ++ V ++ + +G +P A ++ +++R L A A++ L Sbjct: 587 KGLEWEAVFVIHLAEGKFPANQAVG-------------AAQYEEERRLLYVAATRAKRWL 633 Query: 728 YISYIGRSIQDNSE---RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 Y+ Y +S + PS + L + + G+ A D A Sbjct: 634 YLVYPRQSTGADRRPLFCEPSPFLAPLPPELLRGSGSGGEAAGRPDWPSAPPA 686 >UniRef50_A5UJ85 DNA helicase II n=1 Tax=Methanobrevibacter smithii ATCC 35061 RepID=A5UJ85_METS3 Length = 1505 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 104/1050 (9%), Positives = 265/1050 (25%), Gaps = 173/1050 (16%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPA 66 S + VL + + DP E +++ + A L+ LS++ + +D Sbjct: 481 SGKTTVLIER-VKYLLNNKGIDP-ESLLVITFTKKAANELKTRLSEETDNISELDVQKMQ 538 Query: 67 -SFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF 125 S I ++L + + ++++ L + +R +L + + Sbjct: 539 ISTIHGFCAKILEKAGYVN-----------LSIIGDDLGEKINMFVRKHLEELGFTGIAY 587 Query: 126 QL---SSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQP 182 + + +++Y + D + L++Y Sbjct: 588 ASKRDAKNIINKYEEYCTFGVDS------------------------QNLIKYIQDNYPI 623 Query: 183 RWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQ------ALQALGKHIEI 236 + ++++E E+ P S +YLQ + L + + Sbjct: 624 SQDYIDFVEQYME--ENEGKFPKMEVKENKEFKQSYYNALYLQVAKSYPIYKELMEKENV 681 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDV 295 + + + ++ + E L + D V Sbjct: 682 IDFGHMQLKAL------EYLRENPDSVFKNILIDEFQDTDPIQMEIFKILMKNCDSATFV 735 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 G+ + +G G Y L + ++ ++ ++ + Sbjct: 736 GDIDQSIYGFRG-SYDNYFEQLSNEYDVKR----------ISLNTNYRSTNQIIDVSEAL 784 Query: 356 EEFSR----SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + R + + +D I + E E + + + + E +I V+ Sbjct: 785 IKPQRDVHSEKDLKGNRDIDFPIYYISNEDKDNEAENICEFIKYLKETGKIDNYNEIAVL 844 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 + S I+ + + +PYAI + +++ ++L+ S ++ Sbjct: 845 TRSVTSNGNCIKP-LMNLLNENNIPYAIKGNKDLLDKDEIKSILTLIYYVISEDKDHHIM 903 Query: 472 ALL-----------DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 D ++++E L + + +V Sbjct: 904 NSWEKKWLNLKAFTDTDFKMKLCNLSDETKEILFNIQEQYENDVVAAEKDVSIEVTGKKS 963 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS-------LLMQLNI 573 + G+ + E+ Q + ++ L + + +L Sbjct: 964 RVRSFGGVFKKYNKPEFENGQEILKDIVNKVSFPYLNVQNLEKWGIKNKDDLAFFDKLFE 1023 Query: 574 WRRGLAQER-------PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 R + E + E + +N +F D I Sbjct: 1024 IRENILSEDIEYKNKLTILEIYMRLLE-INDYFNADFINNPNNQDEISNLAFISNTLYNY 1082 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 + ++ S V + T+ + + F VV + +D +P Sbjct: 1083 EQMYYNKAIRGAFWFLYTNIEDYGSSNVDPNGVQLMTVHKAKGLEFPVVIVASFSDKKFP 1142 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRD-------------------DDRYLFLEALISAQQKL 727 + D K + + ++ + A+ AQ L Sbjct: 1143 SKFISPNPDNGYIHGKPAFFTPYEFLKYKDFENESEEVLIHEEEENRIIYVAMTRAQDIL 1202 Query: 728 YISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 +S S P D+ + + L Sbjct: 1203 VLS---------------------------SLVPPSDKENEITYKGSSLVEDLLINKNYA 1235 Query: 788 PFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRA 847 A + + +P + +L+ + P R Sbjct: 1236 ------------------MSLQAKEIEIPKTVCKKPDFEEELLELSFTSLKSYLQCPFRN 1277 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRA-AGD 906 + I + L + + D+ + + + Sbjct: 1278 KLLNHFHFKISDKTQ--ITYGKVIHKALEVINKRIKATGEYLGDDEVKNIVENLFYTNPN 1335 Query: 907 LPYGAFGEIFWETQCQEMQQLADRVIACRQP----GQSMEIDLACNGVQITGWLPQVQPD 962 + Y ++ + + + ++ ++ ITG + + Sbjct: 1336 IAYDRKQKLKTDKLDDIVDNVIHYYHTFGNKIKVIDSEVQFNVKNKDYGITGAIDLIYET 1395 Query: 963 GLLRWRPSLLS----VAQGMQLWLEHLVYC 988 + A+ M+ + L Sbjct: 1396 DDGKIGLLDYKYTSSEAKYMKWHKKQLYVY 1425 >UniRef50_A4XB81 UvrD/REP helicase n=4 Tax=Micromonosporaceae RepID=A4XB81_SALTO Length = 1144 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 116/882 (13%), Positives = 203/882 (23%), Gaps = 118/882 (13%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV-GNPLLASWGKLGRD 309 + DPA LA R ++ E + V +P +++ G D Sbjct: 257 LDDPALLAAERRRLAHVYVDEYADTDPAQQELLATVAGGGKALVVLADPDSSTYAFRGAD 316 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE-EFSRSDNKRPLD 368 +++ + + ++ L A + + + Sbjct: 317 PGGVVT-FPHRFRTASGAPAAQVVFTTSYRAGPRLLAAHARLARRLRGPATHRRTRALPA 375 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + S E L L A D + ++ V+V P Sbjct: 376 AAAGAAEVRTFRSAASEAAWLAHALRAAHLLD-GVPWSEMAVLVRSTGRALP----SLRR 430 Query: 429 APADRYLPYAISD-RRARQSHPVLEAFISLLSLPD--SRFVSEDVLALLDVPVLAARFDI 485 A +P + P + + LL R E +ALL P+ A Sbjct: 431 ALHAAGVPTVVHGEDLPLHLQPAVAPLLLLLRCALAPDRLDEEAAVALLHSPLGGADPLA 490 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 + LR +G R + V L PA G+ R A G Sbjct: 491 ERRLRQGLRVMALAAGDRRPSGELIVEALRDPAE-----LAGIDRRWAEPAQT-VAGLLA 544 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 G AE L R L + Sbjct: 545 VTRETAARPGATAE---------EVLWAVWRVSGLAELWSAALARTPAAAGEGEVARRRR 595 Query: 606 EAAMTLIEQQWQAIIAEGLGA-QYGDAVPLSLLRDEL--AQRLDQERISQRFLAGPVNIC 662 A + + + D + V + Sbjct: 596 AEAADRDLDAVMVLFDAAARFTDRLPGARVEVFLDHVLGQDLPADTLAPTADRGDAVRLL 655 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK------PKRGDRSR-------- 708 T + + + +V + G+ +GV+P + G+ R Sbjct: 656 TAHAAKGLEWDLVAVAGVQEGVWPDLRLRGSLLGSERLVDVLAGRSAGEGRRVSVVGQTS 715 Query: 709 --RDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQEL------------- 751 D++R LF A+ A+++L +S + + + PS + EL Sbjct: 716 ALLDEERRLFHVAVTRARRRLMVSAVASAAVGGDDHDEQPSRFLHELGVADPPPGGGGGP 775 Query: 752 -----------------IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 S A A L DP Sbjct: 776 DGDARPGEGAGSDGDAGPGEDAGSDDARTGALPLSRPPRALTLASLVAELRTAVTDPSAP 835 Query: 795 QPGERQSYAREWLPAASQAGKAHSEFVQPLPFT----------LPETVPLETLQRFWAHP 844 R + A AA AH + L P V ++ Sbjct: 836 VLRRRAAAAELARLAAEGVAGAHPDDWWGLRPLSDERPLVADGEPVRVTPSGMESALRCS 895 Query: 845 VRAFFQMRLQVNFRTEDSEIPDTEPFILEGL--------SRYQINQQLLNALVEQDDAER 896 +R + S + R + + D E Sbjct: 896 LRWLLERHGGGAP---ASAAQGVGNLVHAAAMLAENASSDRRALLDYVAARF---DAIEL 949 Query: 897 LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG--VQITG 954 R G + ++ LA + L + V + G Sbjct: 950 AARWMV-------GPEQARAEAMVDKLLRWLATNPRRLLAIEHEFAVRLDDSRHPVDLVG 1002 Query: 955 WLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAE 1014 + +++ D R L + + + + + F E Sbjct: 1003 RVDRLEVDSDGRLVVVDLKTGKSTAVT-----AADLTEHPQLGAYQAAVEAGAFAEFGTE 1057 Query: 1015 QALHYLSQLIEGYREGMSAPLLVL---PESGGAWLKTCYDAQ 1053 L QL G +E P +G A A+ Sbjct: 1058 SGGASLVQLGTGAKEAREQAQPPAGEGPAAGWATALVRRTAE 1099 >UniRef50_D1BAW5 DNA/RNA helicase, superfamily I n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BAW5_SANKS Length = 1111 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 120/1001 (11%), Positives = 233/1001 (23%), Gaps = 160/1001 (15%) Query: 144 DWLAQWETGHLVEGLGEAQAWQAP-LWKALVEYTHQLGQPRWHRANLYQRFIETL--ESA 200 D + W + L AL E+ + + R A L ++ T Sbjct: 151 DLVESWHGDLGTDAAVSTVVAAVLDLSNALSEHLLTVAEAREQVARLVEQITSTPFGGKR 210 Query: 201 TTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKL 260 + L G ++A Q + ++ ++ A A Sbjct: 211 RSLHADLGKLARSLGERHALLEVVEAFQQRKRAMDALDFGDQVSLAAQLAVEVDAVAAGE 270 Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIYLLSDLES 319 R ++ + + LF + VG+P + +G G + Sbjct: 271 RARYAVVLLDEYQDTSYAQIRLLSSLFGDGHPVTAVGDPNQSIYGWRGASASG-PARFPD 329 Query: 320 SQELDAFVDVTPDNLLHNIQSD--ILELENRAVAGVNIEEFSRSDNK--RPLDPLDSSIT 375 L + ++D IL++ N + + + S S+ Sbjct: 330 QFRDREGRPAAVHRLSTSWRNDLAILDVANTTSRPLYLADPDNSLPSLEPRPSAGLGSVH 389 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 + + E + + + E T V+ + +A R L Sbjct: 390 GVYSATVEEEGAAIAEFVAKRWEPGTTTA----AVLCRARSQF-----PAIEAALRKRGL 440 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 P + + P + ++LL + + ++ L + R ++ L L Sbjct: 441 PVEVVGLGGLLTTPEVVDLVALLEVVHDPSRGDSLMRL----LTGPRLNLGAADLHALAS 496 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 E G R + + + G+ + + S Sbjct: 497 RSAELGRR---NRADRPVEGDVTDERSIVDALDDLPAEGWVGPDGRSFSDAGWGRLRSLA 553 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLE-EWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 + + L L L + L+ E V + + Sbjct: 554 GMLRELRALTYL--SLPELVDRAERALGLDIEMALVAARARDDAPSTRPTADPRGRAHLD 611 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI----SQRFLAGPVNICTLMPMRSI 670 ++ + A L L+ +ER V + T+ + + Sbjct: 612 AFRDVAATFADTS--QLATLGAFLAWLSTAQQRERGLDRPQGAPDPEAVQLITVHASKGL 669 Query: 671 PFKVVCLLGMNDGVYPRQLAPL----------------GFDLMSQKPKRGD--------- 705 + VV + G+ DG +P F L + Sbjct: 670 EWDVVAVPGLVDGAFPSTRTTGDKGPTSSGWLTGLGQLPFPLRGDARDLPELSLAGADDS 729 Query: 706 ---------------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 ++R L A A+ L ++ PS+ + E Sbjct: 730 AELNARLVDFRERCGEHEVAEERRLAYVAFTRARSDLLLTGAWWRSAT-KPSTPSLFLTE 788 Query: 751 LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 L + A + + + LT P D P + A + Sbjct: 789 LHEA---GVLAEFTVAEQPEPGTSNPREDLTPEALWPPVDEPADGPEGSAAEAADGSATL 845 Query: 811 SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVR------------AFFQMRL---QV 855 + + + L+ L HP L ++ Sbjct: 846 REPLELLR---------RSRDLVLDALVDVAQHPASTEPVLARDGTDLTELSEILLAERL 896 Query: 856 NFRTEDSEIPDTEPFILEGL--------------------------SRYQINQQLLNALV 889 RT + + GL R + Sbjct: 897 TRRTAVTAMEFPAHVSASGLVEIARDRDAYALALRRPVPRQPSVHSRRGTAFHLWVERQY 956 Query: 890 EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG 949 L A DL G + + A + ID G Sbjct: 957 GSTSLFDLDDMPGADDDLVDGDTALADLQRTFE-----ASVWSGLVPLEVEVAIDTMIAG 1011 Query: 950 VQITGWLPQVQ--------PDGLLRWRPSLLSVAQGMQL-----------WLEHLVYCAS 990 V + V PD + + + + Sbjct: 1012 VITRTRIDAVFLDPEQPGGPDRAPGVVVVDWKTGRAPTDREAARAREVQLAVYRIAWSQW 1071 Query: 991 GGNGE-----SRLFLRKDGEWRFPPLAAEQALHYLSQLIEG 1026 G + ++ D R LA L L L+ G Sbjct: 1072 SGTPLEDVSAAFYYVADDTTVRPQRLAG---LAELEALVRG 1109 >UniRef50_A8ZYJ7 UvrD/REP helicase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYJ7_DESOH Length = 621 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 63/503 (12%), Positives = 136/503 (27%), Gaps = 91/503 (18%) Query: 256 YLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD---GEQDVGNPLLASWGKLGRDYIY 312 K ++ + E L + G+ A + G Sbjct: 194 IREKYQEVFCHLLVDEFQDTNPAQMEILKLLIPENRQGSFWCTGDDHQAIFSFTGASVGN 253 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA-GVNIEEFSRS--DNKRPLDP 369 ++ F + PD+ + + A I + + +P Sbjct: 254 IIH----------FKSIFPDSQQMILHVNYRSTPQILAACQNLIRHNEKQIHKTLKTDNP 303 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + S + E L + + +E +D+ V+ F + Sbjct: 304 DGEEVIVLESSSEETEAINLVHEIQTL-KESTDYDYQDMAVLYR-----CNFQSRIIEEV 357 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + +PY I + ++ + L + S E +E Sbjct: 358 FSQHKIPYHIENGLCFYDRREVKILLDYLRVISSPETDE-----------------GDEA 400 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L + N R I + L +A E ++++ Sbjct: 401 LAGILNVPNRYIGRKFIGE-----------------------LRSFAAEKQFHLYRALKE 437 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + I + + L L L RP E V + ++ + + + Sbjct: 438 LPVTLPYIRKNIQALTGFLDPL---ISEAGHIRPAEAISLVRTSLDIDRYVSEEDMPSPD 494 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + Q ++ +R L + S V++ T+ + Sbjct: 495 DVKIQNMDQLLLSAARYD--------DIRAFLDYAAGFQNESVSDNREGVSLMTIHKAKG 546 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F VV L+GM +G+ P + +++R + A+ A LY+ Sbjct: 547 LEFPVVFLVGMVEGILPTRRN----------------ENIEEERRICFVAISRAMHLLYL 590 Query: 730 SYIGRSIQDNSERFPSVLVQELI 752 S+ + S + E++ Sbjct: 591 SHYMTCL--GQAARTSRFLCEIL 611 >UniRef50_D1YBS1 UvrD/REP helicase n=3 Tax=Propionibacterium acnes RepID=D1YBS1_PROAC Length = 1085 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 119/991 (12%), Positives = 244/991 (24%), Gaps = 108/991 (10%) Query: 94 KLMTLLPQLLEREDFTLLRHYLTD-------DSDKRKLFQLSSKAADLFDQYLVYRPDWL 146 +L +L R LR L D + L+ + + L+ P+ Sbjct: 73 RLSEVLVLAQTRPSAQALRTALVRRLGGAHLDPQVMTVHALARRIVASPSKRLLTAPEQE 132 Query: 147 AQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPG 206 + + + W L + A+ + L P Sbjct: 133 FRMRELLAARDISD---WPEEL---------RTCAGTAQFASDVRVMAARLRQEGCDPQD 180 Query: 207 LPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLA-------K 259 L G+ P + L ++++ L Y + + Sbjct: 181 LTEAGTASGV----PEWRMLGPFLADYLDVLDLEG--SLDYAEAVHRARIALTRPGADVE 234 Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD-VGNPLLASWGKLGRDYIYLLSDLE 318 + +R + +D Q+ +P +G G Sbjct: 235 VRSRIKLLICDDLTECDPSQVRLLAQIARCHVPCVLTADPDQTIYGFRGA---------- 284 Query: 319 SSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE---------EFSRSDNKRPLDP 369 ++ LD +D PD +H++ ++ ++ A ++ R Sbjct: 285 VAERLDEVIDEFPDVSVHHLTTNYRNSQHIAEVVESLRTGMPVVPSSSRLRRHANHSTST 344 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 ++ S R V + L D + R + V+ V + Sbjct: 345 EAGTVAALRAPSITRLVRKIAGTLRHARVAD-GVAWRSMAVVTRHGGELD-----VIATI 398 Query: 430 PADRYLPY-AISDRRARQSHPVLEAFISLLSLPDSRFV-SEDVLALLDVPVLAARFDITE 487 A +P D A + ++ L + + ++ + + I Sbjct: 399 LAAEGIPVLRSRDEHALSDIYAVTHILNALEMAVALASGAQPSARDVATLLSNPLAGIDR 458 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGE-WQS 546 + L W G+D D EL A T R A + Sbjct: 459 SVIHRLETWCRLV---RGVDVDWALLKELGADPTVTAAGKSERTDDASRSGDAITAELDT 515 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD-------MLNAFF 599 + L LA + ++ L E L + Sbjct: 516 ACEVYSVPPSLRALAQPLAVMTQRVQRAADLLRSGATCHEALWALWQGSSWASSLRRRAV 575 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 D+ + + + + A L + + Q V Sbjct: 576 AGDSTANRDLDGLCSLFDMAESAQTMAGIAGGQRLIEVVRQ-EQIPADRARESDEDRDGV 634 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP------LGFDLMSQKPKRGDRSRRDDDR 713 ++ T ++ F VV + G+ +G +P + G + Sbjct: 635 SVVTAHRIKGREFDVVAVCGLEEGNWPAGNHTGSLVRADRWSPDGLVAAPGWSENLRAET 694 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 L L A A+ +L + S ++ PS LV L + L Sbjct: 695 RLLLVASSRARHQLLL-CSVDSAEEGK--RPSGLVAGLPHIEDNADSLSFASLTELVGEL 751 Query: 774 ARVKAHLTCLHTRMPFDPQNYQP-GERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV 832 RV A + + + R +P A A + + Sbjct: 752 RRVIADESESPGVRTEAQALLDDLRNEEHHGRRLVPQADPATWWRQGVPRQDDMDGEIEL 811 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD 892 + P R F R + + + ++ ++Q Sbjct: 812 SASHVGELLTCPRRWFMTRRAGASSGSAFRAS------------IGSLVHRICAENMDQW 859 Query: 893 DAERLFRRFRA---AGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC-- 947 + A +L +Q+ + + E+ + Sbjct: 860 SLPKALAELEAAWPEIELSAEWQRSAELADAKAAVQRFDGWLQLRNRQLIGTEVRVDGTI 919 Query: 948 ----NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKD 1003 ++ G + +++ D + L ++ G + + Sbjct: 920 TVPSGTARVRGSIDRLERDAEGAYYVVDLKTGTSQSDEIKQ---SHRLQIGVYQAVVASG 976 Query: 1004 GEWRFPPLAAEQALHYLSQLIEGYREGMSAP 1034 G P + A L L G +G + P Sbjct: 977 GVEAIGPTSVSGAE--LVHLRIGAGKGQANP 1005 >UniRef50_C5RAZ7 ATP-dependent deoxyribonuclease, subunit B n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAZ7_WEIPA Length = 1188 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 119/1088 (10%), Positives = 273/1088 (25%), Gaps = 191/1088 (17%) Query: 16 LMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQ------KFGIAANIDFPLPASFI 69 + V++ D +V + + L++ + G A + Sbjct: 17 ALLQRVQQVLATDEQAQVFYIVPNHIKFETEINVLTRLATLSGRHGAAIAV--------- 67 Query: 70 WDMFVRVLPEIPKESAFNKQSMSWKLMTLLP-----QLLEREDFTLLRHYLTDDSDKRKL 124 P S F+ ++W M P L + L++ L + KL Sbjct: 68 -----------PNVSVFSLSRLAWYYMQNDPIYQQANLSQNGLTMLVQTLLQQHKAELKL 116 Query: 125 FQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRW 184 + Q+ + + V + + Q L L + Sbjct: 117 YGNLLTKQGFIGQFTTQLLELKQSGLSWDDVTDIADKLTNQETLQMKL-----------Y 165 Query: 185 HRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPC 244 A + Q + L YL + L + + T+ Sbjct: 166 DLATIGQSLEDELAQRG--------------------QYLSSDLLLALKVYLATEKTDIS 205 Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWG 304 +Y+ I D + + + G ++ + Sbjct: 206 HHYFF-INDYSQMTSPERGLVEALITYAGGVTIALPADDGSASLTESAISEND-----LF 259 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK 364 ++ L D + ++ Q + ++++ Sbjct: 260 YRPKNLGRQLRDAAVTHKIPV------IANTIEAQRKMSS--GMLAVEDFWIKYAQQGII 311 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 R D +I H+ +EVE + + + RD ++M D+ Y + A Sbjct: 312 RDSYDADDAIEIWQTHTRYQEVEQMARLIRQEVAAGK-HRYRDYLLMTRDLGQYENIMPA 370 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 VF +P + R +HP++ LL L + + DV+ LL +L Sbjct: 371 VFARY----EIPIFMDLDRPMSAHPLVAFLDKLLHLAPA-YTMTDVMGLLKTELLIPDGV 425 Query: 485 --ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 + + G + + + +TR + Sbjct: 426 LLADYREALAETENYVLAKNIAGWQWTDKTPWQYDRQALTSDDE-VTRERVASKDAQLAM 484 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 + + + +L + + ++ L W + D Sbjct: 485 IHDQISQTVAPFLHHLQQAPTAREMARELYNFITQIGIQKRLINWRDNAIE------QGD 538 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNI 661 + + + + +I+ + + + + L +L+D D + + V+I Sbjct: 539 LWSAQQPEQVWRVFISILDDFVQVFDSEVMTLEVLQDVFTAAFDSAKYAGIPATMDQVHI 598 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK------------PKRGDRSRR 709 ++ ++ V + G + P + K + Sbjct: 599 SESGIVQRTGYETVIVFGATNHNLPAVTRIKAILHDGDRAILQPALPDNVFLKETSEQQM 658 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG----QSHYLPGDE 765 + L A++ A Q+L +Y + + PS V + Q LP Sbjct: 659 AQESLLMYRAMMVADQRLIWTYATSDG--DGSQQPSTYVTRIQKQFQLPLVQFDALPDPM 716 Query: 766 ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP-- 823 + + D+ + + + Q + S A L Q + Sbjct: 717 SHHVDDYVGTPTSTIAQIIIANRQAKQRGTVDGQLSAAWRNLIQQVQKIAPYQLQHLLGS 776 Query: 824 -LPFTLPETVPL---------------ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 PE + L+ + +P F Q L++ R Sbjct: 777 LHYQNEPEKLQPVLVNTLFGHDLKASISRLESYSRNPYEFFLQYGLRLQERQV------- 829 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEM--- 924 L + + +L L + L + + G L + + + Sbjct: 830 --LQLTPAEKGTLMHAMLEQLF-----QTLVTKQQVLGALTDDQLRHLEQDILQGLLTSD 882 Query: 925 ------------QQLADRVIAC-------------------------------RQPGQSM 941 + + +A + + + Sbjct: 883 DPTYDIFNSSSRMRFLTQQLAIQVHETMISMKRGQLLDGGVHTIGVEAGFGLPQSQLKPV 942 Query: 942 EIDLACNGVQITGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL 998 E D+ V++ G + + + ++ + + + Sbjct: 943 EYDMPFGRVKVRGKVDRYDLVETNAGNFLTIVDYKSSKRVFDYSKAYAGLELQLMTYWTA 1002 Query: 999 FLRKDGEW 1006 L Sbjct: 1003 MLMNKDVL 1010 >UniRef50_C7XXL1 ATP-dependent nuclease subunit B n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XXL1_9LACO Length = 1253 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 130/1136 (11%), Positives = 272/1136 (23%), Gaps = 226/1136 (19%) Query: 9 RLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQW------LQMTLSQKFGIAA--NI 60 L + + D F LV + L + A + Sbjct: 16 HQHALVQELHQQLVAHPNDQFF----FLVPNHIKFSTEIDVLNQLKNLGDSTDVYAQSRV 71 Query: 61 DFPLPASFIWDMFVRVLPE-IPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 W + P+ S + K++ LP+ L + Sbjct: 72 QVLSFTRLAWFLLRNDPHYQTPRISDVGLTMLVAKIIRELPEDD-----------LKMFA 120 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 + + + + Sbjct: 121 KEAHRYGFVQDLT----------AQLIELQNANVDPQD---------------------- 148 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 + IE ++ S F+ ++ L VY + L Sbjct: 149 ----------HDAIIERVQKWADEHQERVSSAFLDKMTVLFKVYAAFEEGLTGR------ 192 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRE-LPLFRDSENAGQLFNSDGEQDVGNP 298 N C Y I L K + + + +G Sbjct: 193 -LNSCAVYQLLI---KRLFKDDFSHTHFFLNRYNGQFSAMEEQIVETMIKKAASTTIGLV 248 Query: 299 LLASWGKLGRDYIY----LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 L + G L F + PD +L + Q ++ + + V Sbjct: 249 LDRPY--RGATLPNPNNLFYQSGMQYHRLAEFAEQQPDVMLVDDQ--VVTVNRVSDGLVE 304 Query: 355 IEEFSRSDNKRPLDPL----DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV 410 +EE+ ++ + + D + F + E++ + ++ ++ RD ++ Sbjct: 305 VEEWMKAQAQFTIPEQQPRTDQGVHFFTAPTRVAELQRVAAKIRQLVASGQ-YRYRDFLI 363 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 + +D Y+ ++ VF +P + R+ +HP++ ++ + D F DV Sbjct: 364 LTRHLDGYTTMLKPVF----DANEVPIFNDNDRSMANHPLVTLLEAIFKIADHYFQLPDV 419 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 L LL ++ + + Y Q + + Q W F Sbjct: 420 LQLLKTGLVVPQERDEKGRSYYSSQRFMSAVYTTENWCLKYGKTGHAWLEQAEWEFTPHV 479 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE---- 586 A + + + + + + + LA + QL G + L + Sbjct: 480 DPQILANNEQLKKREQ-QQTSQINWVKSVVRNQLAPFIKQLQGASDGQTAAQILYQGLIN 538 Query: 587 --WLPVCRDMLNAFF-LPDAETEAAMTLIEQQWQAIIAEGLGAQYGD-AVPLSLLRDELA 642 A + + ++ E + + L+ + + Sbjct: 539 LGVREQLEQWAKAATKRGQMDLAQQPQQVWNTMVNLLDEYVTVLGNEGTFYLTAFAEVIQ 598 Query: 643 QRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 SQ V + +++ KVV ++G D V P G K Sbjct: 599 VGFQTATYSQIPSTMDQVLVSETGIVQTNQRKVVFMIGATDDVMPEIKISEGLLSDPDKQ 658 Query: 702 KRGD------------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 R D++ L +++A+++LY+S + S + Sbjct: 659 LLSQGLTDGQFLPVSGMQRIDNEAMLNYLGMLNAREQLYLSAPVMGSNE-ERVTMSPYLV 717 Query: 750 ELIDYIGQSHYL----------PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER 799 L Y GQ + + + E V A L + + Q G+ Sbjct: 718 GLATYFGQWDADNNQLRNDLPFAPEPRADFAKLEPFVSAPAATLTNYVQVERQAKNAGQT 777 Query: 800 QSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPL------------------------- 834 S + + + Sbjct: 778 VSAGWRNISREMNHERLGWLKSSLNYQNQTTKLSPEMAAQLYGHLDPDVLKQATAAGDNF 837 Query: 835 ------------------ETLQRFWAHPVRAFFQMRLQVNFRTEDS-EIPDTEPFILEGL 875 LQ F+ +P F + L + R E ++ F + L Sbjct: 838 DWTTVSDDQRHNTLATSISQLQTFYRNPYEYFLKFGLDLQKREELEITNANSGTFYHDSL 897 Query: 876 SRYQINQQLLNALVEQDDAERLFRRFRAAGDLPY----------------GAFGEIFWET 919 + + + + ++L A D + +T Sbjct: 898 EAFVRLLKQNQVKLAELADDQLAFYVAKAMDWAFSRQPSVVELAANYERIAYQKHHLEQT 957 Query: 920 QCQEMQQLADRVIACRQPGQSMEIDLACNG------------------------------ 949 + L ++ + E G Sbjct: 958 VLTMARVLRNQAQYSASHPVTTEQKFGHVGLLDDRHDSQPSYRALIYETKIRNQKSSQPD 1017 Query: 950 ----VQITGWLPQVQP---DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL 998 V + G + +V D A ++ Y + L Sbjct: 1018 LKRKVYLRGRIDRVDAVRGDQQDYLTVVDYKSANKEFDLVD--AYEGLDLQMLTYL 1071 >UniRef50_Q5M2T6 ATP-dependent helicase/deoxyribonuclease subunit B n=33 Tax=Streptococcus RepID=ADDB_STRT2 Length = 1106 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 113/1024 (11%), Positives = 278/1024 (27%), Gaps = 173/1024 (16%) Query: 42 MAQWLQMTLSQKFGIAA----NIDFPLPASFIWDMFVRVLPEIPKESAFN-----KQSMS 92 M+Q L L+++ A + + P++ ++ +VL +P+ ++F+ M+ Sbjct: 8 MSQDLTEILTEQASSYAQKGKRVFYIAPSALSFEKERKVLEYLPQSASFDITVTRFTQMA 67 Query: 93 WKLMTLLP----QLLEREDFTLLRH-YLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLA 147 + QL + + L D+ K++ K ++ +Q + + Sbjct: 68 RYFILNTSNPKTQLDDTGLAMIFYKVLLHMGDDELKVYGRLRKDSNFINQLVDLYKELQQ 127 Query: 148 QWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGL 207 T ++ L + + Q L + L + + F + + S Sbjct: 128 ANMTVLDLQHLDQVEK-QEDLVRIFSAAQDLLLAGDFDNQSKLSAFFKEITSGHLDEALS 186 Query: 208 PSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRH 267 + + I G + + L ++ T + Sbjct: 187 NTVLVIDGFTRFSAEEEALVALLNDKCHQIVVGTYTSQK--------------------- 225 Query: 268 SFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFV 327 GN AS D++ L+ Sbjct: 226 --------------------AYKANFVYGNVYQASV-----DFLRTLAQ---------TY 251 Query: 328 DVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVE 387 V PD + + + + L + + + ++ + ++ + + EV Sbjct: 252 KVIPDYVTTDKEGN-LSFARISRLLES-RHDFSTVDETVTEQDKHALKVWEVVNQKEEVA 309 Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 + + +L + +DI+V++ D +SY + +F +PY + S Sbjct: 310 QVAKSIRQLLADGK--RYKDILVLLGDEESYKLHVGQIF----RKFDIPYYFGKEESMSS 363 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG-IRWGI 506 HP++E SL + + +ED+L L+ + + Y + + G ++ Sbjct: 364 HPLVEFVDSLERIKRYNYRAEDLLNLVKSGLYGGFAQEDLDLFEYYVNFADIKGRHKFLS 423 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 D + + R L + + +S Sbjct: 424 DFTANSRDKYNLDQINALRSQL---------------------IEPLDKFLNSRKQKGSS 462 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 LL +L ++ + + E + + + + + I+ + Sbjct: 463 LLKKLVVFLEAVQLPSQMFELSTKASE----------AEKEQNEQVWKAFTHILEQVETI 512 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 +++ + L + VN+ ++ V LGM + Sbjct: 513 FGDESLSVDDFLSILRSGMLACDYRTVPATVDVVNVKKYDLIQPHSAPYVFALGMTQSHF 572 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYL-----------FLEALI---SAQQKLYISY 731 P+ ++ + D+ R L A+ +A ++L +S Sbjct: 573 PKVGQNKSLLSDEERSRIN--EATDEHRRLDIVTQINSKRGHFVAMSLFNAASEQLVLSQ 630 Query: 732 IGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA------------- 778 + + SV ++EL+D + + + Sbjct: 631 PQIINESQDDM--SVYLKELLDLGIPLVEKGRNRFEAKGDQIGNYRDLLSTVIALNSSHL 688 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP-----FTLPETVP 833 L F + ++ + L ++ + P + Sbjct: 689 DLDLDKETQTFWSVAVRYLRKRLDKDQVLIPKVIDDVTTTKVDDQVMQLVFPEEEPLKLS 748 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD 893 L F+ + F + L++ E + ++ ++ Sbjct: 749 ATALTTFYNNQYLYFLRYVLELEEL---------ESIHPDARHHGTYLHRVFERVMGDSS 799 Query: 894 AERLFR--------------RFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ 939 +E + F E + + A + + Sbjct: 800 SESFDDKLEKAIAQTNQDQPFEILYTEDQESRFSRQILEDIARSTASVLRDNAAVKVECE 859 Query: 940 SMEIDLACNG-VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL 998 ++ DL ++ITG + +V + + Y + L Sbjct: 860 EVKFDLLLANSIKITGIIDRVDRLTDGALGVVDYKTGKNVFD--IQKFYNGLSPQLVTYL 917 Query: 999 FLRK 1002 + Sbjct: 918 EALR 921 >UniRef50_Q896L9 DNA helicase II n=2 Tax=cellular organisms RepID=Q896L9_CLOTE Length = 698 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 51/524 (9%), Positives = 136/524 (25%), Gaps = 92/524 (17%) Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASW 303 CR + + L + + + ++ + L + VG+ + Sbjct: 214 CRELL--VNNSEILNECRNKFKYLLIDEFQDCDHMQLSILKMLNKDNSIFAVGDEDQCIY 271 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAG---VNIEEFSR 360 G + + F ++ + EN + I + Sbjct: 272 SFRGA----------KPEGMVDFPRYFHQGEKIFLKINYRSGENIVELSKNLIKINKLRS 321 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 S + + I + ++E + +L +E+ +DI ++ Sbjct: 322 SKEIFTYNKFEGKINIIYSEDEKEQIENILKEVLYNIEK-KGYNFKDIAILYRRNTEALI 380 Query: 421 FIQAVFGSAPADRYLPYAISDRR-ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 I + + ++ + +H + +S + L +++ P Sbjct: 381 II-----DYFLRNNVEFNLNQKYFNIYNHFICNDILSYIKLSLDNKNRHSFTRIINKPF- 434 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 I++ + L+ G R + ++ + Q L R + Sbjct: 435 ---RYISKTHIEKLK------GFRRKDNCFDIMCNLNISLLQIKTIKALKRNINKIKKLD 485 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 ++ + ++++ Sbjct: 486 IDKIVDYIMKDIG--------------------------------------YEEYIHSYS 507 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 E + I + + + L + + + + + Sbjct: 508 KKLKIDEEELLYIVYVLKKALEDFTS--------LEDFIRYIE---ESKNKALEKKENAI 556 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 + ++ + + FK V ++ NDG P D+ + +++R LF A Sbjct: 557 TLSSIHSSKGMEFKSVFIINCNDGNIPHNSNVND---------LEDKFKLEEERRLFYVA 607 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 L + L + S S ++E + S+ Sbjct: 608 LTRSISNLNLCIC--SNIRGKYLPYSRFLKECNLNLKDSYNTDE 649 >UniRef50_A5N879 ATP-dependent DNA helicase n=2 Tax=Clostridium kluyveri RepID=A5N879_CLOK5 Length = 670 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 52/503 (10%), Positives = 133/503 (26%), Gaps = 92/503 (18%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIY 312 D L ++ + + + + VG+ +G G Sbjct: 189 DKNILKYYSNLFTYILVDEFQDCDRLQIDILKLIGKNSSVFAVGDEDQCIYGFRG----- 243 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDP 369 + F + ++ + + N N+ + Sbjct: 244 -----SHPICMVDFNRYFEEGQKLFLKKNYRSVYNVVKMSQNLICNNKNRNLKCVESSRM 298 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 +I F + S + + L + ++E RDI ++ I + Sbjct: 299 NRGNINFKIFESEKEQACYLAHIIKQIIEAGK-CRCRDIALLYRTNIECVNII-----DS 352 Query: 430 PADRYLPY-AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + + + + SH + + I L E +++++ P I + Sbjct: 353 LLKNDIKFKFLHGKYNFYSHFICKDLICYFKLALDMCDKESFISIVNKPF----RYIGKI 408 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + +R + ++ + Sbjct: 409 NIEKVRNNRVKENC-----------------------------------------FEILK 427 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + + + L + +L + + L++ +D L+ A Sbjct: 428 NIEGIPVFQIKAIDKLQRNIKKLRKIKPKERVKFILDKL--EYKDYLHKHCEKLASNMEE 485 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + +Q++ I + + + + + + V + TL ++ Sbjct: 486 YYYVIEQFKQICEDFTS--------IYEFLKHVETAEEFLHKNLQE-EDAVILSTLHGVK 536 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + FK V ++ N+G P + + +++R LF + A LY Sbjct: 537 GMEFKNVFIINCNEGSIPHSNSI--------------LNNLEEERRLFYVGITRAIDNLY 582 Query: 729 ISYIGRSIQDNSERFPSVLVQEL 751 + S S ++E Sbjct: 583 L--CSTSTIKGRAVEVSRFIREC 603 >UniRef50_A9KRX8 UvrD/REP helicase n=10 Tax=Bacteria RepID=A9KRX8_CLOPH Length = 666 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 60/591 (10%), Positives = 153/591 (25%), Gaps = 98/591 (16%) Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQ 228 ++ L + + + + + + + Sbjct: 110 YRLLRDIIQSMELEIEDEKEFLEGIGSEISLVKGENMDISHYYSMNCSEETFQEIYKEYD 169 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 +H Y I+ P L+ + + ++ + E L Sbjct: 170 KKLRHQNKIDFDDMLLLCYELLIERPDILSLWQQKYQYILIDEFQDINRIQYEIIKMLAK 229 Query: 289 S-DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN 347 + VG+ + + G + + +F + + + N Sbjct: 230 PKNNLFIVGDDDQSIYRFRGA----------KPEIMLSFEEEYKGVKKVVLNKNYRSKGN 279 Query: 348 R---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 A+ V + + + + I + + + + + + Sbjct: 280 IITGALKVVGNNKKRFPKEIQSIHEPGNEINVKSFSDLPAQNQAILEEIDHY--RKMGMR 337 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA-RQSHPVLEAFISLLSLPDS 463 I V+ + + +P+ + D H + + I + L Sbjct: 338 YSQIAVLYRTNTQPGSLVTK-----LMEYNIPFKMRDSLPNIYEHWIAKDLICYIKLSMG 392 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 L +++ P Sbjct: 393 IRERGLFLQVMNRP---------------------------------------------- 406 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 R + A+E + ++ + + E + +L + + P Sbjct: 407 -----KRYISREALEQTDVDLNTIREFYMEKPYVVER-------IDKLVYDLTLIRRTNP 454 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAM--TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 + R + +L + + + + E + + L+ + + Sbjct: 455 YAAINYIRRAVGYDDYLKEYAAFRRIKVEELYDILSELQEESREYKTHEE-WLNHIDEYK 513 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 +Q + V + T + + F VV L+ N+G+ P + A + Sbjct: 514 DGLKEQALKQNQKDVDGVILTTFHASKGLEFDVVILMDANEGITPHKKAVVP-------- 565 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 +++R +F A+ A+ L+I Y+ + N E PS V EL+ Sbjct: 566 -----EDMEEERRMFYVAMTRAKSFLHIFYVKQR--YNKELSPSRFVGELL 609 >UniRef50_A9EBT7 Superfamily I DNA and RNA helicase n=1 Tax=Kordia algicida OT-1 RepID=A9EBT7_9FLAO Length = 914 Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 70/781 (8%), Positives = 190/781 (24%), Gaps = 166/781 (21%) Query: 264 QRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE 322 + ++ + +L ++ VG+ + D Y Sbjct: 208 LKYLVVDEYQDVNPVQENLIEELSKSNCNICVVGDDDQTLYEWRLSDVKY---------- 257 Query: 323 LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL------DSSITF 376 + F + D ++ + + A + + + ++ D I + Sbjct: 258 IQQFKERYKDVSYIKLEDNFRSSKGIIDAAIKCITNNTQRLPKIMNAKGHQRFRDGDIIY 317 Query: 377 HVCHSPQREVEVLHDRLLAMLEED---------PTLTPRDIIVMVADIDSYSPFIQAVFG 427 + + E + + + + + ++ L D +++ + + Sbjct: 318 NQYEDVESENQFIAETIQKLRGKEFQDRNGGAKRGLDYSDCAILLRTWKKATSIM----- 372 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A +P+ +S P ++A ++ ++ + + A + + + + Sbjct: 373 EMLAAHNIPFVVSGVNNLFERPEIKASKAIYQYLNNDIEEDTLKAYWEAVSENIKSEDID 432 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + + + + + + + + + G Sbjct: 433 AAIEAISKKKPNPKMYFSTFNIQEIFWTFIEKAKLSEEVFADKEHEGIVGNDINEVI--- 489 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 +L +N + +++P+ Sbjct: 490 -------------YYNLGMFSQIINDYASIHFKDKPI----------------------- 513 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + + + Y + L V I T+ Sbjct: 514 ---WKLKGFLNFLRYSADGYYPEG--------WLNNSYKT--------PNAVQIMTVYQS 554 Query: 668 RSIPFKVVCLLGMNDGVYP-RQLAPLGFDLMSQKPKRGDRSRR----DDDRYLFLEALIS 722 + + F +V + G+N P ++ ++ D+ R + +R LF A+ Sbjct: 555 KGLEFPIVFVPGLNKNYLPIKRPGGKQIWHFIEREWIKDQHRLEVSEEAERRLFYVAITR 614 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 +Q+ L+I+ + E S +E+ + Sbjct: 615 SQKYLFITRSKENRLYQKE---SPFAKEVSNS---------------------------- 643 Query: 783 LHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWA 842 + Y+ + +A + L+ F+ Sbjct: 644 ---------DYIISDKNPDYSHLENLTPTPKKEA-----------GAIQLNFSVLKAFFD 683 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFR 902 P R F + +E I L + + +D + Sbjct: 684 CPYRFKLISLYG--FVSPITERMGYGNSIHNVLME---MHR---RHLNGEDVSNINIDEL 735 Query: 903 AAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ------PGQSMEIDLACN-GVQITGW 955 + I + Q +A + EI + G+ + G Sbjct: 736 VENHVHIPYATNIVLDNIKQTTNNVATAYLEENHKEFDNIEYAEQEIQIDLGDGIMVNGR 795 Query: 956 LP---QVQPDGLLRWRPSLLSVAQGMQLW---LEHLVYCASGGNGESRLFLRKDGEWRFP 1009 + ++ DG + Q +E L A G + + + Sbjct: 796 MDLIKKIDLDGNESTTIIDFKSKKESQDQDITMEQLSMYALGYKELTGKTADRLQIFNLD 855 Query: 1010 P 1010 Sbjct: 856 E 856 >UniRef50_A5KIK3 Putative uncharacterized protein n=2 Tax=Ruminococcus RepID=A5KIK3_9FIRM Length = 1197 Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 88/875 (10%), Positives = 212/875 (24%), Gaps = 174/875 (19%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG----EQDVGNPLLASWG 304 G++ A + + ++ + F + VG+ + + Sbjct: 374 GELVPSAVAGEYAKQFEEIMIDEYQDSNFVQETILTSVSGQAEGKNNIFMVGDVKQSIYS 433 Query: 305 KLGRDYIYLLSDL-------ESSQELDAFVDVTPDNLLHNIQSDI--------------- 342 + Q +D + + + + I Sbjct: 434 FRLSRPELFMQKYNTYSLEDSDRQRIDLHKNFRSRGEVLDSVNYIFRRIMKKEMGGIEYD 493 Query: 343 ----LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSP--------QREVEVLH 390 L L + IE ++ + + + E ++ Sbjct: 494 DSAALYLGAKFPKTEEIEAKRYISSECERNTDLFKTELLILKDRDKEAENVRRSEARMIA 553 Query: 391 DRLLAMLEED----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 R+ +++ + +DI+++ + ++ F + A+ +P Sbjct: 554 RRIKSLMRGGVVSDKKTGEYRPVQYKDIVILTRSVKGWA----EDFSAVLAEEGIPAYSV 609 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 R + + L + D+ + A+L P+ E + + Sbjct: 610 SREGYFETYEVSVLLDYLKILDNGRQDLPLAAVLASPLGNLL----TEDMAKI------- 658 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 +S Y L Sbjct: 659 ----------------------------------RVAYPDVPFHESARMYASEEAQDPVL 684 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 L Q++ +R+ ++ + + + ++ E + Sbjct: 685 KDRLMRFFSQVDHFRKKVSYTPIHDLLTEIIEETGFGIYISAMEGGVQRAANVEMLVEKA 744 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERIS--QRFLAGPVNICTLMPMRSIPFKVVCLL 678 G Y ++L + + A V I ++ + + F VV Sbjct: 745 KAFEGTSYKGLFHFVRYIEQLKKYDVDYGEAGIMDEQADTVRIMSIHKSKGLEFPVVFAA 804 Query: 679 GMN----------------------DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 GM D + ++ L + ++ + Sbjct: 805 GMGKQFNTQDTKSSMILHPEWGIGIDKIDLKRRTKAPTFLKKLIREEAMYEMWAEEMRIL 864 Query: 717 LEALISAQQKLYISYIG------RSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALN 768 AL A++KL ++ + RS +D + S + + ++A Sbjct: 865 YVALTRAKEKLIMTGVLPDRFIMRSGKDGVITAGAKSYFDWIIPALWSEEEEAALEDAPV 924 Query: 769 --CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 + + A + + + + Y E +A + Sbjct: 925 CIFQYTGNDIGADILQVKSEQLALDVLKHWDVTKVYDPEIRKCL--DEQADYVYPYYSEG 982 Query: 827 TLPETVPLETLQRFWAHPVRAFFQMRLQV---NFRTEDSEIPD--TEPFILEGLSRYQIN 881 + + L++ R Q +P E L G SR Sbjct: 983 GMKMKFTVSELKK------RKALQEEAGEEMYKEPQTVPLLPRFIKEEETLSGASRGSAY 1036 Query: 882 QQLLNAL-----VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ-----QLADRV 931 + L L E DD E R G L I E + ++ ++ Sbjct: 1037 HKFLELLDFAKEYEADDLEAEVERLAEDGRLSREMAECIETEDMMRFLRTKSGVRMLQAA 1096 Query: 932 IACRQPGQSMEI------------DLACNGVQITGWLPQVQPDGLLRWRPSLLSV----- 974 R+ + DL+ + + G + + Sbjct: 1097 RN-RKLYKEQPFVISVNASEIYQGDLSGEKILVQGIIDVYFEEEDGLV-VLDYKTDQVKS 1154 Query: 975 -AQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRF 1008 + ++ + L Y A + + +++ + F Sbjct: 1155 RKELVEKYHAQLEYYAHALSQLTGKTVKEKIIYSF 1189 >UniRef50_Q3AA34 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Carboxydothermus hydrogenoformans RepID=ADDB_CARHZ Length = 1090 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 84/705 (11%), Positives = 195/705 (27%), Gaps = 103/705 (14%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 RA +++ + P +++ +P E+E R++ L + Sbjct: 259 RYRASELLHLAQNYYPLLPDPYSGSLENLSLIAAANPLEEMEK-AARIIRYLAKFKGYKL 317 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 DI+V++ + Y I+ VF LP + A H + +L F Sbjct: 318 SDILVLIPEDGYYISNIKTVFNEY----GLPVYVDKGLAFDHHGLYFLLKGVL----GEF 369 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 E + L +L T + + L ++ G+ + ++ +W Sbjct: 370 NREAAINCLKSGLLNL----TADEVFALENYLLSRGLDGEKLVLKEAWEDPNSSYWESWE 425 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 G ++ + + L Sbjct: 426 KG----------------------------------------FGEIISFSQILPLINTYR 445 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 E+ + +L +P ++ Q + ++ E + + + +EL L Sbjct: 446 EFSQSLKQLLLKIGVPRRISDENGERFWQAFTNLLTEIEEVFGAERLNPTTFAEELLAYL 505 Query: 646 DQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 + + V + + V +LG +G +P A ++ K Sbjct: 506 AKLSLKTIPKGLDQVRAGGSKRYWTGEARAVIILGAVEGKFPSPPAAGLIFTEEERAKLK 565 Query: 705 D---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 R R +D + AL A++++Y+SY S P++LV L Sbjct: 566 KVGLELSPLIRQRLKEDNFHVFLALTRARERVYVSYPRVS-LTGESFTPALLVDWLKKAF 624 Query: 756 GQSHYLPGDEA-LNCDESEARVKAHLTC------LHTRMPFDPQNYQPGERQSYAREWLP 808 G ++ R+ + + N + + Sbjct: 625 PNLKSEEGSYGNETTPQALTRLLSREMVKVKKNGELPFIAQGAFNALLLSKPELITKIAR 684 Query: 809 AASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED-SEIPDT 867 A + F +T+ + L+ +++ P++ F + ++ R E + Sbjct: 685 AFATNPGKIKLNAGFKEFLPSKTLSVSRLETYYSCPLKYFLKYLIKAEEREIFTPEATEI 744 Query: 868 EPFILEG--------LSRYQINQQLLNALVEQDDAERLFRRFRAAGD-----LPYGAFGE 914 + + Q LL ++ + + + G+ F Sbjct: 745 GALLHGAVAEIIKTVREKGQKLSTLLAEDLKTLVYQAFTKAQQEYGEKFLATYRGRYFLN 804 Query: 915 IFWETQCQEMQQLA------------DRVIACRQPGQSME-IDLACNGVQITG---WLPQ 958 + + ++ LA + + + ++ + G + Sbjct: 805 RLYLMLFKAIEALAYFEGFTKFTPFGEEIAFGEKERLKSPVFEVNGEKYTLAGKIDRIDV 864 Query: 959 VQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKD 1003 + +G R E V + L + + Sbjct: 865 YENNGKTYLRIIDYKTGSISISLDE--VVGGINLQLLTYLLVASE 907 Score = 85.4 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 39/269 (14%), Positives = 83/269 (30%), Gaps = 35/269 (13%) Query: 1 MLRVYH----SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQ--WLQMTLSQKF 54 ML + S + + +++ L + +V + + +L T Sbjct: 1 MLTIVRGPVGSGKSRYCREEIIKVLKEAPLGP---MVLYIVPESATFENEYLLNTREDLP 57 Query: 55 GIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHY 114 G + + + ++ S F Q K++ + +L+ Sbjct: 58 G-SFRLQVLSFSRLALNVVREFKAFFKNSSEFVYQHTLKKILQE-----NKGKLQILQKA 111 Query: 115 LTDDSDKRKLFQLSSKAADLFDQYLVYR--PDWLAQWETGHLVEGLGEAQAWQAPLWKAL 172 + LF ++ YR P+ L + + L + L+K Sbjct: 112 ADNP-------GFIEDLLKLFKEFRRYRVKPENLEKASSEIENWMLQQKLKDVYLLYKLY 164 Query: 173 VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGK 232 +E + L ++F+E + ++VFI G P+ L+ ++ L K Sbjct: 165 LEKFGEEYTSE----GLLEKFLEYAPKSKFLA---GAKVFIDGFYTFTPLELEVIKTLLK 217 Query: 233 HI-EIHLLFTNPCRYYWGDIKDPAYLAKL 260 E+ + Y I + Y L Sbjct: 218 TCAEVTVTLPT---EYDPGIFNRLYSEAL 243 >UniRef50_C4Y181 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y181_CLAL4 Length = 924 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 84/593 (14%), Positives = 163/593 (27%), Gaps = 67/593 (11%) Query: 191 QRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGD 250 +R + L++++ P+ IS + +Y + L A HL+ + C Sbjct: 233 RRHLSRLKASSAEMSRSPADGKRF-ISRVSSLYQELLTAS------HLIDFDDCLILALR 285 Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 + ++ ++ + E VG+P + + Sbjct: 286 LLRDHHIL---PHVEHTLVDEFQDCSAVQLELMYAFSQGRSVTVVGDPDQSIYAFRAAQS 342 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI-EEFSRSDNKRPLDP 369 +EL + + + + + + K Sbjct: 343 GTFGDMRRHYEELGC------TYQVVRLTENYRSTAAILALSERVMRQQMGREEKTLRAQ 396 Query: 370 LDSSI--TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 +SI + S +E + + + + D V+V + Sbjct: 397 HTASILPGYACLDSAAQEARWIAHHISHL-GQYEIFDRADFAVLVRT-----AYQTRAIE 450 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + A +PY I RA + A + L S + + L+VP R Sbjct: 451 TEFARAKIPYTIVKGRAFWERRDVVAVVDYLRAVASDYDRLALFRALNVP----RRGFGP 506 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + + L Q + V + L A G V Sbjct: 507 KSVAELVQLHEKHKCSAFETLKQVASG------------AIQSSLGQKAQAQLTGFVNFV 554 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 E E E + R L F D E Sbjct: 555 EKARSCLSECYEANDLGRFFNYVYVQSGLEKELEPDSEGNISEVRSQLAQFVSEDEEVSG 614 Query: 608 AMTLIEQQWQAI------------IAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 M IE + + + I++ A+ V LR L + S + Sbjct: 615 QMGEIETEKEELRIRVDTGDKNISISKIKKAESNLDVGREHLRQFLESLSLFDTDSSQES 674 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL 715 + V+I T+ + + + VV + G+++G+ P A +++R Sbjct: 675 SQKVSISTIHGAKGLEWPVVFVPGLSEGLLPASFAVDD----------SKPETINEERRC 724 Query: 716 FLEALISAQQKLYISYIG--RSIQDNSE--RFPSVLVQELIDYIGQSHYLPGD 764 F A A+ L++S Q + PS +++L I P + Sbjct: 725 FYVAASRAKVLLFLSAYTEDSDGQWGRKPIEKPSRFLKDLEGLICSKLSWPQE 777 >UniRef50_C0GR52 UvrD/REP helicase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR52_9DELT Length = 713 Score = 172 bits (435), Expect = 7e-41, Method: Composition-based stats. Identities = 57/512 (11%), Positives = 131/512 (25%), Gaps = 99/512 (19%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDY 310 +P L + + ++ + + A + + VG+ + +G G D Sbjct: 206 DNPEVLEYVRSVYGYVMVDEYQDTNLVQARLARLIASDQGNIMVVGDDAQSIYGFRGADV 265 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE---FSRSDNKRPL 367 +L F P + ++ + + I N Sbjct: 266 GNILD----------FPGTFPGARVIKLEQNYRSTQPVLSLTNCILSSMGQKYEKNLFST 315 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + S + + R+ + DI V+ + + Sbjct: 316 RTDGARPELITPSSDMAQAGAVLSRVEELSSR---YPLHDIAVLFR-----AAYHAYPLE 367 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + Y ++ +SL+ + L + Sbjct: 368 VELNKASIGYQKFGGMKFSEAAHIKDVLSLMRMVQDPPEILAWKR-----GLGLLKGVGP 422 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + + L Q S D +++ E L R A S+ Sbjct: 423 KTAQRLYQAYCTSLTSG--DGSELKKFETKNEQFAGLMELLRRQKNLPASPSS------- 473 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 L ++ + R +E+ +E+ + E Sbjct: 474 -------------------FLTEVLDFYRPFLEEKHMEDLPRRLSGL---------EQLE 505 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 +T +A +A+ + + + + + T+ Sbjct: 506 QITSAYNHLEAFLADMVLENSDP-------------------VGMQAREDALVLSTIHSA 546 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + + V L+ + + +P + D D+++ L A A+ L Sbjct: 547 KGLEWSAVLLIDLVEERFPS------------RRAMQDPDDMDEEQRLLYVACTRARDYL 594 Query: 728 YI----SYIGRSIQDNSERFPSVLVQELIDYI 755 + S RS N +PS V+E+ + Sbjct: 595 GLFVPQSIYQRSTGFNQRVWPSPFVREIDTSL 626 >UniRef50_C2UN36 ATP-dependent DNA helicase, UvrD/REP n=3 Tax=Bacillus cereus RepID=C2UN36_BACCE Length = 719 Score = 172 bits (435), Expect = 7e-41, Method: Composition-based stats. Identities = 67/595 (11%), Positives = 159/595 (26%), Gaps = 76/595 (12%) Query: 167 PLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQA 226 + L +Y +Q +L + T + P P I I +A Sbjct: 192 IIKNILKKYKYQDAYDPETVLSLISYYKNTFVTPENLPVKTPIEKEIKTIYH-SYEEWKA 250 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 +I L Y ++D L L + ++ + L Sbjct: 251 DNNQMDFDDILLYT------YQLLLEDYQLLELLQNKFLHILVDEYQDISLLQQMIVKML 304 Query: 287 FNSDGE-QDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL 345 VG+ + G D +L F + P + ++ + Sbjct: 305 AYPQKLIFGVGDDGQTVYSFRGSDPKLILD----------FPNEYPGAKVIKLEVNYRSN 354 Query: 346 ENRA---VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 A + + R + E + + + ++ T Sbjct: 355 PYIVGLGNAVIKNNKVQFKKELRAFKADGPKPIYSSPADSDEEAINIVQSIKSAIKS-ET 413 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD-RRARQSHPVLEAFISLLSLP 461 +DI V+ + +PY + + + I L L Sbjct: 414 RQFKDIAVLYRTHA-----VSRAIVEQLVLNDIPYIQYGNKDTFYENTYVRPIIGFLRLA 468 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 + E + + +V + Sbjct: 469 LNPTDEEAIKEICNVLYI------------------------------------------ 486 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 + ++ + A++ G+ + +L Y S + + +++ L + Sbjct: 487 -SKEKAISHINRASALDYIDGKVKPLLYYLTSIPELKKYQLQFIIGVIKNLKGLARLNPD 545 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 +EE + + ++ + A L+ + + Sbjct: 546 LAVEEIRHGYIGYEKYLQNNKRGSLTIHQELVKEVLDELTASSKKFKDIASFLNFIDKVI 605 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA---PLGFDLMS 698 + E + ++ V + T+ + + F V +G+++GV P + A Sbjct: 606 LRNKQMEELQKQQNPDAVALHTIHSSKGLEFPTVFFIGVSEGVLPHKSALEVMEDRITNK 665 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 ++ + +++R L + A+ +L+IS N S ++E+ Sbjct: 666 KEMLMKLQESLEEERRLAYVGITRAESELFISSPKV--VRNQSCEISRFIKEVYK 718 >UniRef50_B8DQ46 UvrD/REP helicase n=13 Tax=Desulfovibrionales RepID=B8DQ46_DESVM Length = 789 Score = 172 bits (435), Expect = 8e-41, Method: Composition-based stats. Identities = 61/615 (9%), Positives = 139/615 (22%), Gaps = 109/615 (17%) Query: 211 VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFE 270 V GI + Y A + + + L R R + Sbjct: 180 VHAEGIGRIAAAY----HAYRREHGLLDYDDLLFELERLLRERADVLDWCRARFRYIMVD 235 Query: 271 DRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV 329 + + + L VG+ + + G D +L F + Sbjct: 236 EYQDTNLVQARLVHLLAGEGGNVMAVGDDAQSIYAFRGADVRNILD----------FPKL 285 Query: 330 TPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREV 386 P + ++ + ++ I + S + Sbjct: 286 FPAAQIIKLEENYRSVQPVLDLTNAILAEAPQAYRKKLFAAREGGDRPQVVRPLSDLTQA 345 Query: 387 EVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 ++ R++ L + P DI V+ + + + + Sbjct: 346 SLVVSRIVEFL---RSYPPHDIAVLFR-----AGYQSYHVEVQLNKLGVKFRKYGGLRYS 397 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 ++ +S L + + A + + L + Sbjct: 398 EAAHVKDVLSYARLVLNPLDLPAFQRIA-----AMSKGVGPKTTLKLYDVARQGNP---- 448 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 A A + + + + + S Sbjct: 449 ----------------------------EATSRACLRYPELRADLDLLDGLRKRPHTPTS 480 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 LL ++ + + ++W +Q I A Sbjct: 481 LLEEVMEHYKPRMEAAFPDDW-------------------PRRQQGLEQLLQIAASYRDL 521 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 ++ ++ + V + T+ + + + V L+ + + +P Sbjct: 522 DL-----------FISDLSLEDPGEEEENRDSVVLSTIHSAKGLEWGAVLLIDLVEERFP 570 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI----SYIGRSIQDNSER 742 + A +++R L A A+ L + S R N Sbjct: 571 SRHAI------------ARAEDFEEERRLMYVACTRARDHLCLFVPASLYSRGDGGNQPA 618 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 PS V+EL ++ + L ++ + G R Sbjct: 619 VPSPFVRELPAHLFDEMHESYSGGLMRRDAPNGQTGQRGAGFGGGRSGGGGFAQGNRFDG 678 Query: 803 AREWLPAASQAGKAH 817 A A Sbjct: 679 APGIPRPPMFAEGTT 693 >UniRef50_B6V2U6 Gp34.33 n=3 Tax=Bacillus phage SPO1 RepID=B6V2U6_BPSP1 Length = 978 Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 51/509 (10%), Positives = 130/509 (25%), Gaps = 87/509 (17%) Query: 274 LPLFRDSENAGQLFNSDGEQDVG----NPLLASWGKLGRDYIYLLSDLESSQELDAFVDV 329 + + V + + + G +E F Sbjct: 538 DTDMYEGYVYSLDVDVHELYIVEGLVTHN--SMYSFRGA----------KPEEFIDFTKT 585 Query: 330 TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS----ITFHVCHSPQRE 385 +++ + + N+ + ++ + L + ++F V S E Sbjct: 586 YKGAQQISMEDNYRSNPHILEVANNLIKNNQKRLPKKLVANKQNDETCVSFEVHESEIEE 645 Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 + + + + +E+ P+DI ++ +PY I + Sbjct: 646 AKKVVEEIKLQVEQG-GKNPKDITILYRTNAQ-----SRALEDYLIISGIPYVIHGGTSF 699 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 ++ I L L E +++ P + + + ++++ Sbjct: 700 YERKEIKDLICYLRLVADSNDDEAFKRVINTP----SRYLGKAFMEKVKRF--------- 746 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 + E +W Y + V + A Sbjct: 747 ----DGSHWEAITEPSMSW--------KNYEQKGINEFVDLVEELKSVAEHGAGDF---- 790 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 E E + D + + T + + + + Sbjct: 791 --------------GEGSPTEVIDYLLDNCYKKHMSNELTSDDFSSRMENVETL-----K 831 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 + ++ + Q + V + T+ + + F ++G+++G Sbjct: 832 FVMEQHDSIESFLKHISDLMSQAKHDI----DGVQLMTIHKSKGLEFDTAFVIGVSEGCL 887 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 P A ++ G + +++R L A+ A+ +IS S Sbjct: 888 PHFRAIESYND-------GRKQAIEEERRLLYVAITRAESVCHISAPK--TFLGKPAPVS 938 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEA 774 +EL I D ++ Sbjct: 939 RFSKELGIEILDMSGTDVDLEDADVDTSD 967 >UniRef50_C4Z0W6 Putative uncharacterized protein n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z0W6_EUBE2 Length = 621 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 61/557 (10%), Positives = 157/557 (28%), Gaps = 108/557 (19%) Query: 209 SRVFICGISALPPVYLQALQALGKHIEI----HLLFTNPCRYYWGDIKDPAYLAK--LLT 262 V I ++ + ++ HL+ + D+ + Sbjct: 146 EAVNIDEYESMSVPQQSFRIIYMAYDDMLVKKHLIDFDDMIGLCRDLLMQREDYRKAWQN 205 Query: 263 RQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ 321 + + ++ + + L + VG+ + +G G +L Sbjct: 206 KYKYILVDEFQDINKAQFDVVRILADGYRNLFVVGDDDQSIYGFRGSAPQIMLD------ 259 Query: 322 ELDAFVDVTPDNLLHNIQSDILELENRA---VAGVNIEEFSRSDNKRPLDPLDSSITFHV 378 F D + ++ + N A E + + S+ + Sbjct: 260 ----FNKYYSDAVRIDMCINYRSTGNIVLASRAVAEENEQRYYKDITTYNSQGDSVFIYE 315 Query: 379 CHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 +S E + + ++ D + DI V+ I ++ S +P Sbjct: 316 FNSLNDEKAFVTSEIRRLI--DSGIAADDIAVLSRTN-----VIGNMYMSRLESDGIPCC 368 Query: 439 ISDR-RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP--VLAARFDITEEGLRYLRQ 495 + H + + ++ + + D L +++ P + + + L++ Sbjct: 369 DYSAVQDVYEHWISKDILTYIRIALGSRERMDFLRIINKPIRYITRSYITQPADINALKR 428 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + + ++ + R +GY ++ +E Sbjct: 429 SCERNEQMSEQVEKLASDINMIRNMSPFAAVNYIRKGIGYDEYIRNYIYEHKADKEE--- 485 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 L L+ ++ L +WL + L +T+ +E Sbjct: 486 -----------LYNVLDELAHRASRYMSLSQWLDGITEYL-----KQCDTQRRNNTVE-- 527 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 V++ T+ + + +K+V Sbjct: 528 ------------------------------------------GVHMLTMHGSKGLEYKIV 545 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 ++ + +G+ P K + +++R LF A+ A++KLY+ + Sbjct: 546 MVMDVCEGIIPYN-------------KAVLDEQIEEERRLFYVAMTRAKEKLYLLSPKQR 592 Query: 736 IQDNSERFPSVLVQELI 752 N + S ++E++ Sbjct: 593 --YNKDTTRSRFLEEIL 607 >UniRef50_A3DH19 ATP-dependent helicase/nuclease subunit A n=7 Tax=Clostridium RepID=ADDA_CLOTH Length = 1251 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 91/994 (9%), Positives = 223/994 (22%), Gaps = 236/994 (23%) Query: 171 ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL 230 ++ L ANL ++ E +R + + L L+ L Sbjct: 330 EIISDLKALYPKMKCLANLVKQLAEKYAEK-------KNRKSVVDFNDLEHFCLEILTE- 381 Query: 231 GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 R G I R ++ + + D Sbjct: 382 --------------RKEDGSIIPSRTAISYRERFAEILVDEYQDSNLVQETIINMISKGD 427 Query: 291 G----EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE 346 VG+ + + L +P + + + Sbjct: 428 DASPGVFMVGDVKQSIYRFRQARPELFLEKY----NTYLPDKGSPCRKII-LSRNFRSRR 482 Query: 347 NRAVAGVNIEEFS---------------------RSDNKRPLDPLDSSITFHVCHSPQR- 384 A + + +N + + + FH+ + Sbjct: 483 EVIDAVNFLFKQIMSTGAGELDYTDAEALNFGAVFDENAKEDITVGGEVEFHLIQTEDED 542 Query: 385 ------------------------------EVEVLHDRLLAMLEEDPT------------ 402 E ++ R+L +++ D Sbjct: 543 KNFTFENEGEEGRQADEGEEDEEMLDSIQCEARLVGRRILELMKPDENGRYFSVFDKAKN 602 Query: 403 ----LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 + RD+++++ +++ VF + +P ++ +SLL Sbjct: 603 EYRRVEYRDVVILLRTTRNWA----EVFVDELSVMGIPVFADTGTGFFKTVEVQVMLSLL 658 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + D+ +L++L P++ Sbjct: 659 QIIDNPLQDIPLLSVLRSPIVG-------------------------------------- 680 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 F + ++ + ++ ES E G ++ L L WR Sbjct: 681 -------FTTDELAELRLVDKKALLFDALKKLAESG--QGEAAGKASAFLENLQKWREMS 731 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 + D + + + Y Sbjct: 732 LYMSTDRLLWQLYNDTGYYSIVGAMPAGEQRQANLRILYERARQFEETSYKGLFNFINFI 791 Query: 639 DELAQRLDQERISQR--FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 D+L ++ V I ++ + + F VV + G Q L Sbjct: 792 DKLKSSRGDMGSAKILSENDNVVRIMSIHKSKGLEFPVVIVAGCGKKFN-LQDMNKSILL 850 Query: 697 MSQK-----------------------PKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 + ++ ++ + AL A++KL I+ Sbjct: 851 HHELGFGPDVVDHKLRLSWPSVAKQAIREKIKAETLSEEMRILYVALTRAREKLVITGAV 910 Query: 734 RSIQ-------DNSERFPSV-----------LVQELIDYIGQSHYLPGDEALNCDESEAR 775 ++++ D++ S + + + + G Sbjct: 911 KNVRKAVEKWLDSASVQKSRLSAYDMLSGANYLDWIGPALLRHKNCGGLRDCVGSAGFRG 970 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLE 835 + + + ++ + Q E E + T Sbjct: 971 LLIDDPSVWSVKIWNKTDVQSSGVSEEQGESEFIKWLDSLEKEEPSEYAEETARRLSWSY 1030 Query: 836 TLQRFWAHPVR---AFFQMRLQVNFRTEDSEIPDTEPF------------ILEGLSRYQI 880 + P + + R + + PD P L + I Sbjct: 1031 PYVKASKVPAKVSVTELKRRYNEVVSEDVMQFPDYMPVLVKKPMFLEEKKGLTYAEKGTI 1090 Query: 881 NQQLLNAL-VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEM-QQLADRVIACRQPG 938 ++ L ++D E A L + + + L R++A + Sbjct: 1091 LHFVMQHLDYGREDIEAQIEEMVAKDLLTPQQAQSVDAARIRRFLNSPLGKRMLASKSIN 1150 Query: 939 QSMEIDLAC----------------NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL-- 980 + + ++ + + G + + Sbjct: 1151 REVPFNIEIPCHELYRDMEDEACHGETLLLQGVVDCYFEEPDGIVLV-DYKTDYVAPGNV 1209 Query: 981 ------WLEHLVYCASGGNGESRLFLRKDGEWRF 1008 + ++Y A + +++ + F Sbjct: 1210 ETIRERYKVQILYYARALEMLTGKKVKEKYIYLF 1243 >UniRef50_Q5HY14 DNA helicase II UvrD n=2 Tax=Gluconobacter oxydans RepID=Q5HY14_GLUOX Length = 682 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 56/570 (9%), Positives = 137/570 (24%), Gaps = 96/570 (16%) Query: 219 LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFR 278 L P Y L+ + LL ++D Y R ++ + Sbjct: 202 LYPAYQAMLRESNRADFADLLLWPTVTM----LRDERYRRDWADRFDCVLADEFQDVNRL 257 Query: 279 DS-ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHN 337 + + VG+ + +G G + + + +F+ P + Sbjct: 258 QFLWLKCLSKDHNELFVVGDDAQSIYGWRGANV----------RIIRSFLKEFPTGRMIA 307 Query: 338 IQSDILELENRAVAGVNIEEF---SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 ++ + + A + + Q E + + Sbjct: 308 LEQNFRSTGHILSAANAVISHDTSRLEKTLYTASGDGEPVDILRHTGSQDEASGIAAEIG 367 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 + D+ V+ + + + +PY + + A V++ Sbjct: 368 RR--ALEGVPYEDMAVLYR-----FNHLSRLLEESLLRARIPYELVNDTAFWQRGVVKDA 420 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 ++ L L + + + + R Sbjct: 421 LAFLRLTCFPYERQS---------------------DEAFRRIVNQPARGIGAKAMATFE 459 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 ++ + R + G ++A L L + Sbjct: 460 QVADEEAISLYEAAERTVQGRTGKAAD---------------------KLRGFLDVI--L 496 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 + + E L E L V + + + +++ Sbjct: 497 KGARSDEPSLGERLRVLVEESGYLAM-HHAAGEDGRTALENLHELLSLANE--------F 547 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 S + + G V + T+ + + F V L+G D ++P + Sbjct: 548 SSVEELFDHAALGSESRDDDSVGRVKLMTIHGSKGLEFGHVFLIGWEDTLFPSRTNIDP- 606 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 ++R L AL +Q++ +S+ + PS + E+ Sbjct: 607 ---------------AEERRLAYVALTRGRQRVSVSWCEFR--RGEQANPSCFIDEIPLQ 649 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLH 784 + + + Sbjct: 650 ARRDGWGRNLRRRPAFQRGTVFNRQDQREA 679 >UniRef50_B2KE91 ATP-dependent nuclease subunit B-like protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KE91_ELUMP Length = 994 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 119/903 (13%), Positives = 260/903 (28%), Gaps = 136/903 (15%) Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIET-LESATTCPPGLPSRVFICGISALPPVYLQAL 227 + AL + L + ++ + GL RV+I + + AL Sbjct: 62 FSALSAKIDAEFTAPNTKKLLSAQHLQNFILKNIVGENGLVKRVYISALKSTLRDMADAL 121 Query: 228 ---QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG 284 L +H Y + LA R +R + +++ + Sbjct: 122 IVPATLKEHAAEGAFGAKEDNEY------MSALADTYERYQRALSSVPGMRSYKEYFESV 175 Query: 285 QLFNSDGEQDVGNPLLASWGKLGRDY----IYLLSDLESSQELDAFVDVTPDN----LLH 336 + + +G D+ + + + + + + F Sbjct: 176 VENIPASKFLSSFKAVIFYGF--YDFTGTQLEIFNAVRQNYKTIMFFPYRKTQAYKFTSK 233 Query: 337 NIQSDILELE------NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLH 390 +S+IL + A + E + ++ + + +I E+ Sbjct: 234 FFESNILGMSKETVELEPAPGVLGAAEDALFNHLISGEAENKNIRIISASGVNGELFAAA 293 Query: 391 DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 +L + E+ +I + ++ Y + +F +P S SHP+ Sbjct: 294 KTILEL-TENNGYKFSEIALCARVLEPYKNNLINIFEQ----NKIPLNTSLEFGLLSHPL 348 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 +LL+L + F EDVL+++ A + + Sbjct: 349 GIFCFNLLNLAHNGFYREDVLSVIKSQYFAVK-----------------------NNWRA 385 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 + + L G W + + S L Sbjct: 386 LAQNSLVERGLEQWENLINK-------------------------KDPAYDSSFLSFLTN 420 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 L + P + +L F + TE T+ II + + Sbjct: 421 LGTQLGFFNKPYPWDVLSKHAVKILEDFVDANILTEGEKTVFNTIVDTIIQINQFSLVRE 480 Query: 631 AVPLSLLRDELAQRLDQERISQRFLAG-PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 + +EL + L ++ + + + V +M +R FKVV LLG+N+ V+P+ + Sbjct: 481 SAKEKEFLEELNEALKEQSVGKVQNSELGVTAGDVMGLRGQHFKVVILLGVNEKVFPQIV 540 Query: 690 APLGFDLMSQKPKRGD---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 + D R ++++ + L SA++KL++S+ RS ++ Sbjct: 541 REDPLLRDKFRRTLRDVQGFWIGQKLDRFEEEKLFYYFTLSSAREKLFLSF-QRSDEEGK 599 Query: 741 ERFPSVLV--------QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR------ 786 PS+ + EL I ++ + K LT + + Sbjct: 600 AVVPSLYLTEVCRAAGIELEKNITNISRRELEKYFQTPQEFLNSKEMLTKIFSFPSVEEN 659 Query: 787 ---MPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAH 843 FD + A + + + + LQ Sbjct: 660 IKAAGFDWDALASYYNAAKAMSARSSLGAYDGIVNYGDEIFSSLSKKGFSASALQNLAEC 719 Query: 844 PVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE-------- 895 P+R FF L ++ + + I + I ++L + + D E Sbjct: 720 PMRFFFIKALGLDEEADILKRDAIASNI-----KGTIYHKILQRVYTEIDREISMDSALA 774 Query: 896 RLFRRFRAAGDL-------PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEID---- 944 L + Y ++ E +Q+ + + + + + Sbjct: 775 ALEKIMALEMSFERYKEFGLYPVVWQVITEKMAAALQEFVKKDVESMEGFAPVMFEAAAA 834 Query: 945 ----LACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFL 1000 A +++ G++ ++ +R +Q L+ +++ L Sbjct: 835 AKHDFAGEEIKLHGYIDRIDR-RGKEYRIIDYKTSQRSVKDLKKVIFNKKYLQPVIYWIL 893 Query: 1001 RKD 1003 Sbjct: 894 ASA 896 Score = 53.0 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 31/239 (12%), Positives = 71/239 (29%), Gaps = 26/239 (10%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMF 73 V +P E ++L S+ ++++LQ+ L++ +G ANI F ++ + Sbjct: 11 LEGALKEVVAGIKQNPLEKVLVLTPSSRLSRYLQIFLTENYGSTANISFMKFSALSAKI- 69 Query: 74 VRVLPEIPKESAFNKQSMSWKLMT--LLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKA 131 + + K+ +S + + +L ++ + R Y++ + Sbjct: 70 -----DAEFTAPNTKKLLSAQHLQNFILKNIVGENGL-VKRVYISALKSTLR------DM 117 Query: 132 ADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQ 191 AD + A A ++ Y+ Sbjct: 118 ADALIVPATLKEHAAEGAFGAKEDNEYMSALADTYERYQR--------ALSSVPGMRSYK 169 Query: 192 RFIETLESATTCPPGLP--SRVFICGISALPPVYLQALQALGK-HIEIHLLFTNPCRYY 247 + E++ L V G L+ A+ + + I + Y Sbjct: 170 EYFESVVENIPASKFLSSFKAVIFYGFYDFTGTQLEIFNAVRQNYKTIMFFPYRKTQAY 228 >UniRef50_C0ZGU0 Putative ATP-dependent DNA helicase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZGU0_BREBN Length = 805 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 61/646 (9%), Positives = 164/646 (25%), Gaps = 93/646 (14%) Query: 116 TDDSDKRKLFQLSSKAADLFDQ--YLVYRPDWLAQWETGHLVEGLGEAQAWQAP-LWKAL 172 + + Q A F Y + +W+ L+ + WQ L + Sbjct: 241 QRIARQLPAGQARELIAGTFHSIFYRMLLHHQPERWDQQRLL-----KKDWQKWRLMRET 295 Query: 173 VEYTHQLGQPRWHRANLYQRF--IETLESATTCPPGLPSRVFICGISALPPVYLQALQAL 230 + + I ++ P + R +A Sbjct: 296 GALLGHDDLATLKETEITEALGIISRWKNEYILPHEVAYREATSDAEKRAIQLYPLYEAT 355 Query: 231 GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 K + Y DP L + R ++ + E L Sbjct: 356 KKKHQWFDFDDMLIGCYEMLRDDPGLLRRYQERLTYVMVDEFQDINRIQYETVKLLAAPQ 415 Query: 291 G-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA 349 +G+ + +G G D Y+L F P ++ + + Sbjct: 416 NNLCVIGDDDQSIYGFRGSDPQYIL----------GFTKDFPQASTFTLEVNYRSHSSIV 465 Query: 350 V---AGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 + + + + + + + + D + + + Sbjct: 466 SLGYSLIGHNRERWAKECQSFHREEGDTYLFEPEDEEEQASRIVDEI--IHRREQGAILG 523 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPY-AISDRRARQSHPVLEAFISLLSLPDSRF 465 + ++ +S P ++ ++ +P+ + + + ++ L L + Sbjct: 524 ECAILYRTNESARPILER-----LSEAGIPFHYTQEEESFYQRQTVRWTLNYLRLALNPD 578 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 ++ + +L ++A Sbjct: 579 DTDALKEILSTLYISAEMWN---------------------------------------- 598 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 L A+ + + + + + + +L Sbjct: 599 -----ALRSQAIIEDKPILHVLPHLTQLKPYQRKHMQQINEILTACKDV-----PPAQAL 648 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 E + + + + E + Q I+A D++ ++ Sbjct: 649 ELIYEDGKLRDYLKKRAKDREDGRERWSDELQQILAASKRHA--TISDFLAYIDQMTRQE 706 Query: 646 DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 + R + V++ ++ + + + V L + +G P + + ++G Sbjct: 707 KEWRTMRPLPDEAVHVLSIHRAKGLEYDHVFLPDLVEGALPHEYTLD-------ELRKGG 759 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 +++R L A+ A+ L I + + S + E+ Sbjct: 760 SGALEEERRLLYVAITRARHSLCIGIP--RERFGRKTRTSRFIAEM 803 >UniRef50_C6WM78 UvrD/REP helicase n=4 Tax=Actinomycetales RepID=C6WM78_ACTMD Length = 1349 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 100/736 (13%), Positives = 193/736 (26%), Gaps = 79/736 (10%) Query: 145 WLAQWETGHLVEGLG-----EAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLES 199 ++ W + + + L + LVE QL H L + + Sbjct: 169 VVSAWTQDLDTDKIPTTITSYLLSLAGELGEHLVE-PEQLLAHAEHLCALIEHAPKAPRQ 227 Query: 200 ATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAK 259 P L V + L A +A + + P + Sbjct: 228 KDALPEKLQEIVDAQRLRVALLPLLDAYRARKRRDAVLDFADQMSLAARLATGHPEVVEG 287 Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFNSDG---EQDVGNPLLASWGKLGRDYIYLLSD 316 R ++ + LF VG+P A +G G L Sbjct: 288 ERERYGAVLLDEYQDTGHAQRVLLRALFGDGDPMPVTSVGDPAQAIYGWRGASAANL--- 344 Query: 317 LESSQELDAFVDVTPDNLLHNIQS--DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSI 374 + + F LL + ++ ++L L N + + + + Sbjct: 345 ---PRFREDFPPADKYELLTSFRNPPEVLHLANAVSGPLRAAGLDVAPLRHREGVEPGDV 401 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEE--DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 + + E+E L D + D + P V+V + D Sbjct: 402 RIGLFPDVRAELEWLADTVAEQWRAHVDTSDEPPTAAVLVRRRSD-----MPAIAAVLRD 456 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 R LP + P + S L + L + +R+ I L Sbjct: 457 RGLPVEVVGLGGLLDEPEVRDLTSALRVLVDPLAGTAATRL----LTGSRWRIAAFDLAA 512 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 + Q + + L + A L G ++ + Sbjct: 513 MWQRARDLAGAPARKSPDEDPLSVLAD------------ALPGEHSEQAGLADALDDPGD 560 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERP--LEEWLPVCRDMLNAFFLPDAETEAAMT 610 S AE + L +L RR L Q P + + + A P A + Sbjct: 561 PSAYSAEGYRRIRRLGAELAALRRRLTQPLPELVADVERTLLLDIEAVARPGGVGRAHLD 620 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 A A + + L + V + T+ + + Sbjct: 621 AFADVVSDFAAASPAATLPALLDYLRTAEHAEDGLA--PGEVEVVDNRVQLVTMHSAKGL 678 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFD---------------LMSQKPKRGDRSRRDDDRYL 715 +++V + + V+P + + + + G +R++ + L Sbjct: 679 EWRIVAVPHVVKDVFPGRRKSASWLKSVTELPAALRGDAQDLPELRVPGGANRKEVEEAL 738 Query: 716 ------------------FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 AL ++ L +S + + PS + EL + + Sbjct: 739 DRHADEFEERRLVEERRLLYVALTRSEHSLLVSGHWWGETGATPKGPSAFLTELREVVTT 798 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLH--TRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 + + P D A + L + P DP + + A + A + + Sbjct: 799 AEHPPADVAHWAPAPGPEDENPLAAKAKTAQWPADPLGSRRDAVSAGAAMVVAALDRLRE 858 Query: 816 AHSEFVQPLPFTLPET 831 A P E Sbjct: 859 AAEHEPPGEPDEPDEP 874 Score = 70.4 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 39/296 (13%), Positives = 71/296 (23%), Gaps = 43/296 (14%) Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP 808 E D S A + V A +P DP+ P + + + Sbjct: 1062 PEGADLPEGSPAADPIPAAPVVPAADLVPADPVPAEPVLPTDPEIVLPTDPEISDPDAAD 1121 Query: 809 AASQAG-------KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 A + + + LPE + + L P + RL+ Sbjct: 1122 PEGWARDVDVLLAERAAAMDRRERVLLPEHLSVSQLVELATDPDQ--LARRLRRPLPFPP 1179 Query: 862 SEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFR--RFRAAGDLPYGAFGEIFWET 919 + + R L L +P G G + Sbjct: 1180 NPL----------ARRGTAFHTWLERRFGAVRLLELDELPGAADEDAVPDGELGRLQE-- 1227 Query: 920 QCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ 979 LA + + +G+ + G + V D W + + Sbjct: 1228 -----AFLASAWADRTPHAVEVPFEAEVDGLAVRGRMDAVFADPDGGWTVVDWKTGRVPE 1282 Query: 980 L----------WLEHLVYCASGGNG-----ESRLFLRKDGEWRFPPLAAEQALHYL 1020 L + + G+ + ++R D R L + L L Sbjct: 1283 ADRVPSLSVQLAAYRLAWASLSGSPVELVRAAFHYVRDDRTLRPADLLDAEGLRAL 1338 >UniRef50_C6HZQ0 UvrD/REP helicase n=3 Tax=Leptospirillum RepID=C6HZQ0_9BACT Length = 647 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 78/622 (12%), Positives = 164/622 (26%), Gaps = 114/622 (18%) Query: 167 PLWKALVEYTHQLGQPRWHRANLYQRFIETLES---ATTCPPGLPSRVFICGISALPPVY 223 L + G + ++ + LP I G +L Sbjct: 94 RLIREFGHRIGVEGGRTLLDREDQRDLVKEIRDAVVGEDPGEELPPAAAIAGYLSLSANL 153 Query: 224 LQALQALGKHIEIHL-----LFTNPCRYYWGDIKDPAYLAK------------------- 259 L L A+ + L R Y + L Sbjct: 154 LLPLPAVIRRRAPWLGHLEKTIEAIARRYREEKAAQRVLDFDDLLVLWLRLLEESPETAE 213 Query: 260 -LLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDL 317 L R R ++ + + L S VG+ + + G +LS Sbjct: 214 LLRDRFRHVLVDEYQDTNPLQGKILDLLVASHKNLFVVGDDSQSIYSFRGAAIDNILS-- 271 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS---DNKRPLDPLDSSI 374 F + P+ ++ ++ + N I E + P Sbjct: 272 --------FQERYPEAGVYRLEKNYRSTPNILSVANRIIEQNSRQIPKTLYSPLPEADHP 323 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 T +S Q + + R+ L D P +I V+ + ++ + + Sbjct: 324 TLVRMYSDQDQARYITTRIRRAL--DRGQEPSEIAVLYR-----AHYVSLSLQLSLSRAG 376 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P+ ++ ++ +S L L ++ + + L + + + Sbjct: 377 IPFHLTSGLKFFEQAHIKDILSWLRLLENDRDAMAWRRI-----LRMVPRVGRKTAEKIE 431 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + + + L P + A G + E Sbjct: 432 ALL-------SRAEAPRKALGDP---------AFLKAAPASARPGIAGIAERFSQLAE-- 473 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 RR ++ + + + E + Sbjct: 474 --------------------RREKNPRDVMDLVGTILATGYHDYLYETFEDPESRE---- 509 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERISQRFLAGPVNICTLMPMRSIPFK 673 + I++ L+ ELA E +SQ V + T+ + + + Sbjct: 510 --EDILSFAAQI--PPETDLADFMAELALLEAGGEELSQEEQKNRVVLSTVHQAKGLEWD 565 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 V LL + +GV+P + + + ++ R LF A+ A+ L + Sbjct: 566 TVYLLSLAEGVFPSSRSAETDEEIEEE------------RRLFYVAVTRARHDLVLCVPQ 613 Query: 734 RSIQD-NSERFPSVLVQELIDY 754 + S PS + E+ + Sbjct: 614 VVGRGFGSPAPPSRFLGEIGED 635 >UniRef50_C1RP66 DNA/RNA helicase, superfamily I n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RP66_9CELL Length = 1162 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 108/894 (12%), Positives = 198/894 (22%), Gaps = 151/894 (16%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIY 312 P A R R ++ + + LF VG+P + +G G Sbjct: 274 PEVGAAERERFRVVLLDEYQDTSYAQLVLLQALFTAGHPVTAVGDPHQSIYGWRGASPGG 333 Query: 313 L---------LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN--IEEFSRS 361 L + +E DV P + IL+ N A + Sbjct: 334 LARFPGAFPVVEKGPDGRERRRPADVVPLSTSWRNDIAILDAANAVAAPLRTGGARVDVP 393 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE-EDPTLTPRDIIVMVADIDSYSP 420 D + V + + E + + + R V+ + P Sbjct: 394 RLAPRPGAGDGLVQALVAQTVEDEADAVAAWVARWWRPAHHPAGARTAAVLCRKRSQFEP 453 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 A LP + + P + +++L + V+ L + Sbjct: 454 -----LRRALRAAGLPVEVVGLGGLLATPEVVDLVAVLQAAHDPTRGDAVVRL----LTG 504 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 AR + L L +W + G R L+ Sbjct: 505 ARTRLGASDLHALGEWARQGARPTGRPGGAPGVEADVVD---------ERSLVDALDAPP 555 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG--LAQERPLEEWLPVCRDMLNAF 598 W+S + E L L L R L+ + E + + Sbjct: 556 PPGWRS----PSGRTVTPEGRRRLLDLAAVLRAVRAHQGLSLPELVGEAERLFGLDIEVQ 611 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS-QRFLAG 657 D A ++ GA + R D + Sbjct: 612 ARADVTPGRARAHLDALADVAAEFARGADRPTLGAFLAWLEAADAREDGLELPVTEPDPD 671 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPR-------------QLAPLGFDLMSQKPKRG 704 V + T+ + + + V + GM DG P L LG + Sbjct: 672 AVQVTTVHAAKGLEWDAVVVAGMVDGGLPATAMLGKDGPKDSAWLTGLGVLPYPLRGDAD 731 Query: 705 DRSRRD---------------------------DDRYLFLEALISAQQKLYISYIGRSIQ 737 D R + ++R L AL A++ L ++ Sbjct: 732 DLPRLECAGAESPKELAERLERFRLDAGDHEVAEERRLAYVALTRAREALLLTAAYWGDA 791 Query: 738 DNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG 797 + R S + +L+D +E + T PF P Sbjct: 792 K-APRQASPFLTDLMDAGLAEVVGRAEEPDPKASNPRAALTP-TAQWPADPFARDGAAPR 849 Query: 798 ERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNF 857 A A+ A A S + A + Sbjct: 850 RDAVTAAAVAVTAAMAELAASGTGPDEGEIGTDPHDTGAGATGSASHDTGAGATGAAASD 909 Query: 858 RTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD--AERLFRRFRAAGDLPYGAFGEI 915 R P + + L+ + +Q + L F Sbjct: 910 RPPTPGSPVGDREDWDALADRLLAEQAARRRGDGRVALPAHLSASSLVRLAAQPEQFALH 969 Query: 916 FWE------------------------------------------------TQCQEMQQL 927 L Sbjct: 970 LRRPVPREPSPQARRGTAFHAWVEAWYGRAALVDVDDLPGADDDVLPDDPGQVELRAAFL 1029 Query: 928 ADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGL----------LRWRPSLL----- 972 ++++ G + + V D + W+ Sbjct: 1030 RTPWAHRAPVAVEVDVETTVGGYVLRSRIDAVFSDPDRPGVPGAVVVVDWKTGAPPRDPA 1089 Query: 973 -SVAQGMQLWLEHLVYCASGG-----NGESRLFLRKDGEWRFPPLAAEQALHYL 1020 ++ +QL + L + G + ++ L E+ + L Sbjct: 1090 ERASRDLQLAVYRLAWARLSGTDPDLVRAAFCYVASGATVVPEHLPGEEEVARL 1143 >UniRef50_Q2J6E2 UvrD/REP helicase n=1 Tax=Frankia sp. CcI3 RepID=Q2J6E2_FRASC Length = 1103 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 96/771 (12%), Positives = 187/771 (24%), Gaps = 82/771 (10%) Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG-NPLLASWGKLGRDYIYLLSD 316 A L R R ++ + + G V +P + + G + LL Sbjct: 243 AWLRGRYRHVFVDEYQDTDPAQERLLEAVAGGGGNLVVLGDPDQSIYAFRGAEVAGLLGF 302 Query: 317 LE-------SSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 + A S + A + D D Sbjct: 303 PARFPRLDGEPAPIVALRRCRRMAPAPLAASRHVARRIPAAGLPVAAIRAHRDLVGRADA 362 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + E E + D L E+ + + V+V + Sbjct: 363 GAGQVQARTFPGTGAEAESVADLLRREHLEN-GVAWDAMAVLVRTAERIG-----RLRRV 416 Query: 430 PADRYLPYAIS-DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A +P + D P + L + + + + + Sbjct: 417 LAAAGVPVSADGDDLPVAQEPAAALLLLALRCAEDPAGAL-TVDAARTLLTSPLGGADPA 475 Query: 489 GLRYLRQWVNESGIRWGID--DDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 GLR L + + G + + L W + L G + Sbjct: 476 GLRALGRALRTLERDAGSEHPAPSAELLRAAVAEPDHWLATIPDDLAGPVRRVGGLLRTA 535 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 +SSG + + L EW R A + Sbjct: 536 GQALRDSSGAPQDALWALW-----------------SASEWPARLRHASAAGGAAGRAAD 578 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVP--LSLLRDELAQRLDQERISQRFLAGPVNICTL 664 + + + A+ G G V ++ L + + + V + T Sbjct: 579 RDLDAVVALFDAVTRLGQRRGPGGGVASLVAELTRQQIAGDVLKPAGESVRRRGVRLLTA 638 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS---------QKPKRGDRSRRDDDRYL 715 + + ++VV + G+ DG +P +P + D+R L Sbjct: 639 HRAKGLEWEVVVVCGVQDGTWPDLRERHSLLGAEQLDAPSRGGLRPPLTRQDLLADERRL 698 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL-------- 767 F AL A+++L ++ + D S PS ++EL + P Sbjct: 699 FYVALTRARRRLVVTAVNSPEDDGS--LPSRFLEELGVAVEHVPGRPARPLTLVGLVATL 756 Query: 768 -NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 + R+ R + V +P Sbjct: 757 RRLATEPDSSPVMRSAAQARLAALAAARDQAGRPLVPAAHPDTWWGLLDPTTSDVPVVPV 816 Query: 827 TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN 886 P + +L A +R F + ++ L + Sbjct: 817 AGPIRLSGSSLSSIGACSLRWFLEHEAYAVTPAS------------TAQGFGKVVHALAD 864 Query: 887 ALVEQDDAERL------FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ- 939 + L D + + + + D A R Sbjct: 865 EVTTGRTPADLAALDARLDTVWRQLDFDARWRSDQERAAAREALARFLDWHAAERGRRVI 924 Query: 940 ------SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 S ++ +A VQ+ G++ +++ D R + E Sbjct: 925 DAEVRFSCDLRVAGRDVQLRGFIDRLELDEAGRVHVIDFKTGRTAVAPAEL 975 >UniRef50_A9BHB1 UvrD/REP helicase n=8 Tax=Thermotogaceae RepID=A9BHB1_PETMO Length = 706 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 53/481 (11%), Positives = 132/481 (27%), Gaps = 87/481 (18%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIY 312 P L K ++ + ++ + E L + VG+ + + G + Sbjct: 266 PEVLNKCSSQFKYVLVDEFQDTNKIQIELVEALSSVHGNLIVVGDDSQSIYSFRGALFKN 325 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA-VAGVNIEEFSRSDNKRPLDPLD 371 + F++ + IQS+ + + I S +P Sbjct: 326 ----------VKDFIEDER-TKVFKIQSNYRSTSDIVGLINHLIPSNSVPKVLKPKRKSY 374 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 + + + + L+ L +DI V+ + V Sbjct: 375 LKPFVVETFDDLEQADAVVKIIEDKLK--EGLDYKDIAVLYRSHS-----LSMVLQQKLD 427 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 + +PY I ++ ++ L + ++ + L I + Sbjct: 428 SKGIPYRILSGLRFIETAHIKDILAFLKVLNNPLDKISWSRI-----LKLFPGIGNKTAS 482 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 + + + + P GQ ++ +L + + + + Sbjct: 483 KIYEEIETGIGKS------------PERGQGEENDNISNILKETEINKFKTPLELLTKLF 530 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR-DMLNAFFLPDAETEAAMT 610 + +E +E + D + + Sbjct: 531 D--------------------------NKESSPDELIDTIYKDFYQEYSFLTYADSKSRN 564 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD--QERISQRFLAGPVNICTLMPMR 668 + +++ I + ++L + S+ + + T+ + Sbjct: 565 MDIERFSEIASRYDSVS--------AFIEDLTLSEEIGVIPASRDKDENKLTLTTIHGAK 616 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + +KVV L+ +N G +P + D++ LF A+ A+ +LY Sbjct: 617 GLEWKVVILISVNPGDFPN-------------GLAIKEQKLDEEERLFYVAITRAKNELY 663 Query: 729 I 729 I Sbjct: 664 I 664 >UniRef50_C6XGC2 DNA helicase II n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGC2_LIBAP Length = 685 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 60/544 (11%), Positives = 145/544 (26%), Gaps = 99/544 (18%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN------SDGEQDVGNPLLASWGKLG 307 P L K + ++ + L VG+ + G Sbjct: 223 PHVLKKYHEKIPYIMVDEYQDINTPQYLLLRLLCQKEDSKQGARICCVGDENQCIYEWRG 282 Query: 308 RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE---LENRAVAGVNIEEFSRSDNK 364 + ++L+ F D + ++ + + N A ++ + Sbjct: 283 AQFSHILN----------FQKDFKDANIIKLEQNYRSTTHILNTANKLISHNKQRFDKKL 332 Query: 365 RPLDP--LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 D+ ++ HV S E+ + ++ ++ +I ++V Sbjct: 333 FTQRDCHDDAKVSIHVSQSDNSELST--IIQEIINIQNTGMSLNNIAILVRTSWQ----- 385 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 F A ++ +P+ + + + ++ L ED +++ P + Sbjct: 386 TRKFEDAFLEQEIPHKVIGG-SFYDRQEIRDALAYFRLVCQEHRDEDFKRIINCP----K 440 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 I +E L ++ ++ I Sbjct: 441 RGIGKESLHKIQYHASQHHI---------------------------------------S 461 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 Q+ +S ++ L + + + W + P + + Sbjct: 462 LLQASEKLIDSGQFRPQIRQSLQNFVKDIRRWNNCSKKMDPAPIANMILEQSGYMAMWKN 521 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNIC 662 ++ + +++ + L L L + S + + I Sbjct: 522 NKSSEKSQERLDNLRELLSIIEKHE-----TLEGFV--LQAPLRENLGSFIPDSNCIQIM 574 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 TL + + F V + G G+ P QL+ + +R L + Sbjct: 575 TLHAAKGLEFDTVFISGWEQGLLPHQLSIN-------------EGNVEGERRLAYVGITR 621 Query: 723 AQQKLYISYIGRSIQDN-------SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 A++K ++ Y + S + EL D + D E + Sbjct: 622 AKKKCHLFYTINRRTHDFTRVERYQPSQVSQFLLELYDPSHTQEIIYDDIYGTFSEHWNQ 681 Query: 776 VKAH 779 + Sbjct: 682 IPEP 685 >UniRef50_A1U7Y3 UvrD/REP helicase n=2 Tax=Marinobacter RepID=A1U7Y3_MARAV Length = 715 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 70/685 (10%), Positives = 171/685 (24%), Gaps = 111/685 (16%) Query: 151 TGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQ-RFIETLESATTCPPGLPS 209 + GL E Q W + + +G+P +AN+ + L+ + + Sbjct: 95 QYKDMFGLKEDQDWVILTENEQRRFMNDIGKPLADKANVEAKELRKKLKEDFSLWSLMKQ 154 Query: 210 RVFICG---------------ISALPPVYLQA--LQALGKHIEIHLLFTNPCRYYWGDIK 252 G S P + + L L + Y Sbjct: 155 SGVCPGNVSDALMALEKARCAKSGATPNHERVSMLDRLAAQTLVQYEKDKRSGGYLDFDD 214 Query: 253 DPAYLAK-----------LLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLL 300 + L + R ++ + + VG+ Sbjct: 215 LLLLPTRALKKYPEVAKGLAMQHRYMMVDESQDTNAVQYWMTKAIAEHHGNLVMVGDDDQ 274 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV-AGVNIEEFS 359 + G L F++ + ++ + AG I+ Sbjct: 275 GIYTWRGARVANL----------RRFIEDFK-APVAKLEENFRSHSKIVTTAGNLIKHNR 323 Query: 360 RSDNKRPLDPLDSS--ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 K+P D V + + + D++ + + DI ++ Sbjct: 324 SRLAKKPFSAKDQGTLPEVRVSERDRDMAQSIVDQISELRAQ--GAEYNDIAILYRTNR- 380 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 + + A ++PY++ + ++A + + + +++ L L Sbjct: 381 ----MTTILEPALKQAHIPYSVVGGMSFYERQEIQAATACIRI-ANKWDDWMALRSLQPY 435 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + + ++ L+++ Sbjct: 436 IDGIGKKGINDTIKSLQEY----------------------------------------- 454 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + L L + + + Q + +D Sbjct: 455 NENLLTLAIHEAPQQFGKAGIRLQAFLVEVFANTHGNADNMTQPELARRLVQWMKDGPMK 514 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 + + ++ E A+ + L + + + Sbjct: 515 ILDREKDDV-VRVKRSDNLDLLVDEIDRAKPDC------FMEYLMEGPISDFVEASDDED 567 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR------DD 711 V + T+ + + + V + GM+DG+ P A + + P + ++ Sbjct: 568 RVTLSTIHRSKGLEWPHVIIAGMSDGLMPLDSAKMNGRPSATSPSKDQADPDDDGGKPEE 627 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSE---RFPSVLVQELIDYIGQSHYLPGD--EA 766 +R L A A + L + + E PS + E+ + Q+ + +A Sbjct: 628 ERRLAYVAATRAAETLTMHHADLYHFPGGEPVVVDPSPYIAEMGLQLPQAQLTNREGYQA 687 Query: 767 LNCDESEARVKAHLTCLHTRMPFDP 791 + + R P Sbjct: 688 KKPEFTPDRSPPPPVTEEHDEPAIR 712 >UniRef50_C8XJ56 UvrD/REP helicase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XJ56_NAKMY Length = 1099 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 103/784 (13%), Positives = 200/784 (25%), Gaps = 101/784 (12%) Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIYLLSDLES 319 RR ++ + + +L +D VG+P + + G Sbjct: 270 QGLVRRLFVDEYQDVDPAQARLIDRLSSGADELVVVGDPDQSIYAFRGSQ--------PG 321 Query: 320 SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVC 379 + ++ H ++ +L R VA + D +P + + Sbjct: 322 AMRRITVEKTVSLDVSHRLRPAVL-TATRRVAAALPGGWPHRDLTSAGEPRPAEVVVRTF 380 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 + E L D L L + V+V + P ++ A A +P A Sbjct: 381 STAASEAAFLADELRRAHLRG-GLAWSRMAVLVRSPAADLPVVRR----ALAVAGVPCAT 435 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL-DVPVLAARFDITEEGLRYLRQWVN 498 PV+ + + LL A+ LR + + Sbjct: 436 GLVDPGSDDPVVRSILRLLDCALEPARLTGERAIDLMTAPGFGMDTDAVRRLRRRLRVAH 495 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 + D L P + +ES + + P Sbjct: 496 PANSGPTADLVAAALLGAPLPEDLPEDLSAPVIAARTLLESVRSVAEDPDPRVPLWRAWQ 555 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 L A L L R G +R L+ L + +A Sbjct: 556 GLGLADALLAASLRGGRAGFRADRSLDAVLGLFDAAGELVARLPYAG----------VRA 605 Query: 619 IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 +AE + R V + + + + + +VCL Sbjct: 606 FLAEVSD-------------RRIGLDPAGARGPGGPGGHGVALLSAHSAKGLEWDMVCLA 652 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGD------------RSRRDDDRYLFLEALISAQQK 726 G+++G +P + + D +++R LF A + + Sbjct: 653 GVSEGRWPVLRRRQSLLGLDELLDAEDGVASGNIDGPGGGDALNEERRLFYVAATRTRGR 712 Query: 727 LYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 L + + + + PS + EL H P + L R Sbjct: 713 LVATSVA-----DQDTVPSRFLTELAGPAELPHGWPEQPDGSRRRRLQ--LTDLVADLRR 765 Query: 787 MPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF----------VQPLPFTLPETVPLET 836 DP +P + + AA+ AH P+ P T+ T Sbjct: 766 AVTDPTTPEPTATAAARQLARLAAAGVDGAHPRDWFGLAGLSTSAAPVADGAPVTLSPST 825 Query: 837 LQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER 896 ++ P+RA + R + ++ +++GL+R + D Sbjct: 826 VEALTRCPLRAVLERRGARSGTSQQQIEGIVMHALVDGLARG---------VPRADLVAE 876 Query: 897 LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC--------- 947 + R +LP + + + + + Sbjct: 877 MERFLAGRTNLPP-WLIARTRRALELMLTAAQTWMAELPADRRPVATEAQLSTWLPQSDE 935 Query: 948 ----NGVQITGWLPQVQPDGLLRWRPSLLSVA----------QGMQLWLEHLVYCASGGN 993 V++ G ++ Q QL + L G Sbjct: 936 AGRGRPVKVNGRADRIDQAPDGSMIIVDFKTGASVPSRAAVEQNAQLAVYQLALRLGAGA 995 Query: 994 GESR 997 + Sbjct: 996 DLAT 999 >UniRef50_C0W6Z4 Possible UvrD/REP helicase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W6Z4_9ACTO Length = 1152 Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 111/863 (12%), Positives = 201/863 (23%), Gaps = 159/863 (18%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIY 312 +A L + R ++ + +LF G VG+P A +G G Sbjct: 266 SQEVVAALREQYRGVLLDEFQDTSTAQVRLLARLFADSGVTAVGDPNQAIYGWRGASAAA 325 Query: 313 L--LSDLESS---QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 L + Q + D + + + A + R P Sbjct: 326 LDEFHRAFNPAGCQAVHRGADPLTTIPVLPLSTAWRNDSRVLEAANALSAPLRHHTPAPG 385 Query: 368 DPLDSSITFHVCH-------------------SPQREVEVLHDRLLAMLEEDPTLTPRDI 408 D + H P +E EV+ L L Sbjct: 386 DAPAPRVPVEQLHARPRQAGLAEGAVLGAYLADPLQEAEVVASFLADRWNPQAQL----- 440 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V+ DS P A R LPY I + P + +LL++ + + Sbjct: 441 AVLSRTRDSLLPV-----AEALRARSLPYEIVGIGGMLTIPEVADVRALLTVAANPERGD 495 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 ++ LL + A + L Sbjct: 496 WLVRLLTAGGIGAADLAALYAHARRQMRGTSPFQPPADKSSQGASSVAQIPDAEPDSPML 555 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 + A + + L GL L QL RR + PL + + Sbjct: 556 AEAIEAVARSADRHP--DGLAGVRVPGLSPAATRLADRLARQLRRVRRAMRL--PLADLV 611 Query: 589 PVCRDMLN-AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 + L+ + + + + + + L + L Sbjct: 612 TLAEQCLDLDIEVAARVDDRIGRRGLDGLREVAEQFTRDLDSAS--LPSFLEWLDAAEAH 669 Query: 648 ERI----SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM------ 697 ER G V + T+ + + + V ++GMN+ +P DL Sbjct: 670 ERALSAPEVEPEPGAVQLMTIHASKGLEWDHVAVIGMNEKGFPLYSTQPREDLSVRSKSW 729 Query: 698 ---------------------------------SQKPKRGDRSRRD-------DDRYLFL 717 + D+ ++R L Sbjct: 730 MGSADEFPHPLRMDAATLPPFTLGVLEPPEVDKDEVKDLLDQYCLALGRYGVSEERRLAY 789 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 AL A+ + ++ S + R S + EL Y PG + + V Sbjct: 790 VALTRARHDVLLTGSHLSKSSTTPRPMSRFLAELRRRDLVQPYGPGWVDFDPEHGNGLVT 849 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQA------------------------ 813 L P + + + AR+ Sbjct: 850 RRARVLWPVQPGAADEAEDRDGVALARQQAAEEVAQACQDASVRLRHESEHSEGDQQAAP 909 Query: 814 -----------------------GKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQ 850 + E P LP + L P Sbjct: 910 EAEVDGEPSTLVARWCEEARVLLAEREQEASAPRQLHLPAHLAATQLDALRTDPEELAL- 968 Query: 851 MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYG 910 L+ + S + +++ L +L E + + + Sbjct: 969 -HLRRPLPSRPSASARLGTVFHDSVTQRLSPHSALFSLEEAGVPDTVSAQ---------- 1017 Query: 911 AFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ------PDGL 964 E Q L D + +E ++ +GV + + V D Sbjct: 1018 --DRQTLERWLATAQDL-DLLQGYLLHDTEVEREMTISGVTLRCRIDAVFRREGSGEDEP 1074 Query: 965 LRWRPSLLSVAQGMQLWLEHLVY 987 W + + VY Sbjct: 1075 AAWLIVDWKTGRHHVPVDQLSVY 1097 >UniRef50_C0QD81 PcrA2 n=2 Tax=Bacteria RepID=C0QD81_DESAH Length = 1157 Score = 170 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 79/579 (13%), Positives = 166/579 (28%), Gaps = 114/579 (19%) Query: 214 CGISALPPVYL--QALQALGKHIEIHLLFTNPCRYYWGDIK----------DPAYLAKLL 261 ++ + P L Q L + + +++ D D A +A + Sbjct: 638 DDLTKIAPPGLDKQDLVRVARVWQVYQEHLAALDLVDFDDLIAMVINLFNTDSALVATIR 697 Query: 262 TRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLESS 320 R ++ + GQL + G +G+P + +G G D Y Sbjct: 698 GRFAHILVDEYQDVNKGQYLLIGQLAGNGRGLVVIGDPDQSIYGFRGSDNRYF------- 750 Query: 321 QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI----EEFSRSDNKRPLDPLDSSITF 376 F P +Q + E A + + S + Sbjct: 751 ---QQFQADYPGAEKIVLQRNYRSTEAILRASFQLLTHGNQEGVSQKVFSDIRGRERLVI 807 Query: 377 HVCHSPQREVEVLHDRLLAMLE---------------EDPTLTPRDIIVMVADIDSYSPF 421 S + E V+ R+ ++ ++ + D+ V+ Sbjct: 808 IEATSDRAEAVVVGKRIETLVGGLSMFSMDAGKVGSTQENEFSFADVAVLYRTRRQ---- 863 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 +F +P+ ++D+ + +HP + +SLL L +D+ + + Sbjct: 864 -GKIFADVFQQAGIPFQMADKESLLNHPGIGELVSLLRLLKGGATFQDLFLVFNH----- 917 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 + G ++L G +L Sbjct: 918 --------------------FKAGAGKGTRQKLGQWFRESELSPAGAVELL--------- 948 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 P+ IAE + +A +M L +GL L+ Sbjct: 949 ----GAAPFVHVRKDIAETLLGVARKIMALGQTVQGLGACDCLDLL-------------A 991 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 + ++ + LG +S + L+ L+ + S A V + Sbjct: 992 SKADLYPLIKSDETSCRVFDRLLGDARNRDDDISCFLESLS--LENDSESLWPSAEKVTL 1049 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 T+ + + + VV + G G+ P + D++R LF A+ Sbjct: 1050 MTMHGAKGLEYPVVFVTGCEPGLIPFAFPGR------------EPEDIDEERRLFYVAMT 1097 Query: 722 SAQQKLYISYIGRSIQDN--SERFPSVLVQELIDYIGQS 758 A+ L ++Y + + PS + ++ + + Sbjct: 1098 RARDILCLTYSTKRRIYGITRQTGPSTFLLDIEAALKEH 1136 >UniRef50_D1XU37 UvrD/REP helicase n=3 Tax=Actinomycetales RepID=D1XU37_9ACTO Length = 1164 Score = 170 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 109/812 (13%), Positives = 194/812 (23%), Gaps = 69/812 (8%) Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFN-------SDGEQDVGNPLLASWGKLGRDYIY 312 L R ++ + LF VG+P A +G G Sbjct: 269 LRDEFRVVLLDEYQDTSVAQRLLLSALFGSGPGGDTGHAVTAVGDPCQAIYGWRGASVAN 328 Query: 313 LLSDLESSQELDAFVDV--TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 L D + +L L N + + Sbjct: 329 -LDDFPQHFPHADGTPATRYSLSENRRSGGRLLHLANGLADPLRAMHEGVEALRPAPGAE 387 Query: 371 -DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 D ++ + + E++ L D L ++ P +I V+ + +A Sbjct: 388 RDGTVRCALLRTHAEEIDWLGDSLAHLVRT--GTPPGEIAVLCRTAGDF-----PRIQAA 440 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 DR +P + P + +++ + + ++ L + R+ I Sbjct: 441 LVDRDVPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVRL----LTGPRWRIGPRD 496 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L L + DDD + L G+ + ++ S Sbjct: 497 LALLGRRARLLVHHASPDDDTDPDRRLAE-----AVEGVDPAEVISLADALDTFLDSGGH 551 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 D+ AE A L +L RR L PL + L A A Sbjct: 552 QDDQLPFSAEARIRYARLATELRELRRSL--ADPLMDVLHRVLSTTGLEVELSASPHALA 609 Query: 610 TLIEQQWQAIIAEGLGAQY-GDAVPLSLLRDELAQRLDQERISQRFLAGP---VNICTLM 665 + + G L L E+ L G V + T Sbjct: 610 ARRRETLANFLDVAAGFAAVDGEATLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAH 669 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD--------------- 710 + + + VV + G+ G +P + + S+ R Sbjct: 670 KSKGLEWDVVAVPGLVTGQFPSTRSREAWTAQSKVLPHALRGDAATLPDVCSWDAKGLKA 729 Query: 711 -----------DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 ++ L ++ L S R PS + L D+ H Sbjct: 730 FKDEMTAHQHTEELRLGYVTFTRPRRLLLGSGHWWGPSQKKPRGPSAFLDALYDHCAAGH 789 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE-WLPAASQAGKAHS 818 A E P R++ + A Sbjct: 790 GEIEVWADEPGPDEENPVLREREAEQAWPLPLDETALARRRAARDTVLAHLDALAAAPDP 849 Query: 819 EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRY 878 E PE + F + + E P E +G Sbjct: 850 EAEAEAQAGPPEHGEPLYDEEFPYDAEEPPYDEDPPYDEEPPYDEEPPGEQLFPDG---G 906 Query: 879 QINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG 938 I + + R DL + +++ LA + R Sbjct: 907 PIR---ADRAPGRVPHLPAARVPSDPPDLTPE--EARTLASWDRDLDALAGELRRARATV 961 Query: 939 QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL 998 + + + + Q+ RP + + S Sbjct: 962 HDVVVPASLSATQLLHLADDPDGFARELARPMPRPPQPAARRGTRFHAWVESRFEELPLP 1021 Query: 999 FLRKDGEWRFPPLAAEQALHY-LSQLIEGYRE 1029 L D AE A L++L E + Sbjct: 1022 MLGPDELPGGDDGDAEIADERDLAELKEAFER 1053 Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 36/266 (13%), Positives = 69/266 (25%), Gaps = 27/266 (10%) Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 ++ R+P DP + P E ++ A + AG+ + Sbjct: 907 PIRADRAPGRVPHLPAARVPSDPPDLTPEEARTLASWDRDLDALAGELRRARATVHDVVV 966 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 P ++ L P F + + R R + + Sbjct: 967 PASLSATQLLHLADDP-DGFARELARPMPRPPQP-----------AARRGTRFHAWVESR 1014 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFG-EIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC 947 E+ L GD E + ++ + Sbjct: 1015 FEELPLPMLGPDELPGGDDGDAEIADERDLAELKEAFER--TEYARRTPYRVETPFQIVL 1072 Query: 948 NGVQITGWLPQVQP----DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNG-----ESRL 998 G I G + V ++ W+ + A +QL + L + G + L Sbjct: 1073 AGRVIRGRIDAVYRTGDTYEIVDWKTARHRTADPLQLAVYRLAWAELHGLAPEAVGATFL 1132 Query: 999 FLRKDGEWRFPPLAAEQALHYLSQLI 1024 ++R R L L +L+ Sbjct: 1133 YVRTGETVRPTGLPG---RAELERLL 1155 >UniRef50_D2RKU1 Exodeoxyribonuclease V n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKU1_ACIFE Length = 1116 Score = 170 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 110/975 (11%), Positives = 225/975 (23%), Gaps = 159/975 (16%) Query: 160 EAQAWQAP-LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA 218 +A A Q + + + + + + + ++ A L + + G A Sbjct: 229 DALADQREAIHQWIAAGEYSKASAALKPVSATGKIKDLVKEAKEALARL-ETLSLDGAGA 287 Query: 219 LPPVYLQ--------ALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFE 270 + + AL + EI+ R K P L + +R R + Sbjct: 288 EQARHWENLLGRFRQALLDAAESREIYSFGYLSGRAVELLEKRPNVLFRYKSRFRYLMVD 347 Query: 271 DRELPLFRDSENAGQLFNSDG-------EQDVGNPLLASWGKLGRDYIYLLSDLESSQEL 323 + + L VG+ + + G D ++ E Sbjct: 348 EFQDTNEEQKRLVYLLSGGSSRSLQGRNLFVVGDAKQSIYRFRGADVSVFRQVRDAIGET 407 Query: 324 ----DAFVDVTPDNLLHNIQSDIL-------ELENRAVAGVNIEEFSRSDNKRPLDPLDS 372 D + L + + A S Sbjct: 408 GGDNIVMDDNFRSAPEIIEACNTLFDDLLGTDSRSDVTAQPLHPHQPSSRKPVFAVLKKG 467 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 T C Q E + + + ED L + +++ I + + A Sbjct: 468 ECTLEEC--QQAEGRYVAQAIRQL-REDTGLPYGQMAILLPAI-----HLSRQYEEALTA 519 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 + +SD + + +ISLL+ + + L P + L+ Sbjct: 520 LGIKSQVSDGKGFYERQEVVDWISLLTFLLNPRKDWALAGFLRSPYAGISDRQLTDLLKP 579 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 + + + + LE P L R L ++ +Q + Sbjct: 580 WPE--------LSLWESLRQSLEEPFVTLSRKLEALHRTALFQSLPELMDAFQEAFAVEP 631 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 + LA+ R + + D +T Sbjct: 632 TLLAQRGGREKLANF---------------------RKLRALGVKGAMEDGDTARDFLDR 670 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 + + + +Q V I T+ + + F Sbjct: 671 LNLMRRL------------------------SARESAANQEADPEAVQIMTIHKSKGLEF 706 Query: 673 KVVCLLGMNDGVY------------------PRQLAPLGFDLMSQKPK-RGDRSRRDDDR 713 V L ++ + P L + + K R R + + Sbjct: 707 PAVFLPDLSKKNHNDTLGIQFLPGQGFGVRVPDAQGNLLETSVYTRLKGEKARLERAEKQ 766 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 A+ A++ LY+ + R P ++ + + G D + Sbjct: 767 RQLYVAMTRAEKYLYLINV--DESKEGSRPPDPDKEKWGQSLQRVFAPEGPHGDQMDWEK 824 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP 833 V L T P + + A + +P+ + Sbjct: 825 LDVAEILENQETGQPGAGEAF-----------------VLDPAVYDRGRPVTVPRDLELS 867 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD 893 L + P ++ + D E + + ++L L E+ + Sbjct: 868 ASALLEYDTCPRSFYYHYFRHM--PGIDPETVGEGSHRISAIDLGTYVHRVLELLQEEPE 925 Query: 894 AERLFRRFRAAGDL-PYGAFGEIFWETQCQE--MQQLADRVIACRQPGQS----MEIDLA 946 E L ++ L + + L Sbjct: 926 EEALAEALEVLDRTGAEKKVFAREGRKLVEQYCASPLYQELKDLPAQAERDFALPLFQLE 985 Query: 947 CNGVQITGWLPQVQPDGLLRWRPSLLSVAQGM------QLWLEHLVYCASGGN------- 993 G + ++ R Q + L A Sbjct: 986 QGRAVFQGSVDRLVTLPDGRLGIVDYKTGHPPTDGEEKQGYTRQLTIYALAAEILYPGQK 1045 Query: 994 --GESRLFLRKDGEWRFPPLAAEQALHYLSQLIE---GYREGMSAPLLVLPESGGAWLKT 1048 FL+ W E+ L L+E + + P + G W Sbjct: 1046 VAWARLHFLQDCSSWELKDREQEE--EKLKALVENLLIWDKEEQFP---ARKEGCQWCPY 1100 Query: 1049 CYDAQNDAMLDDDST 1063 Y Sbjct: 1101 RYFCPEGTGEQPAVD 1115 >UniRef50_A4REL5 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea RepID=A4REL5_MAGGR Length = 819 Score = 170 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 62/598 (10%), Positives = 150/598 (25%), Gaps = 79/598 (13%) Query: 246 YYWGDIKDPAYLAKLLTR----QRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLL 300 Y + L + + ++ + + L VG+P Sbjct: 200 DYDDLLVKGVELLRAAPECVSNVQAVLIDEYQDTNGVQYDLMKLLAQRHGRITVVGDPDQ 259 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EE 357 ++ + E+ + I EE Sbjct: 260 ---------------------------------NKVALEENYRSSESILATSLKIIQQEE 286 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA-MLEEDPTLTPRDIIVMVADID 416 + + + + +E E + L +L + D+ +++ Sbjct: 287 KRFDKVLKAVHTRGTKPVLRKLRNSAQEAEWIVAELRRTILLSGDMMNHDDVAILLRSAA 346 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDV 476 + SA +PY + ++ + L + ++ + +++V Sbjct: 347 -----LSRHIESALGKAGIPYRMVGGFKFYERAEIKLILDYLRVVYQPDNNDALARIINV 401 Query: 477 PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA 536 P + + ++ L + +S + + + T R + + + G Sbjct: 402 P----KRGAGDATIKALLEEAEKSQQS--LWSLLRKHCTGGKQAKTTLRKQVEQKISGGL 455 Query: 537 MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN 596 + + + + +L ++ L E+ L++ + Sbjct: 456 IRLILDIRKKMDESTAENPYS---------MLDVISQVLSRLDFEQHLKDTYNDEWEGRW 506 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA 656 A + + + Q + L+ ++ D + Sbjct: 507 ANVQEFINLATDFMTGNEVEEELPEIDGLQQTPERDTLARFLANVSLATDVQNNDPGQNR 566 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF 716 V + T+ + + + VV + +G P + G D++R L Sbjct: 567 PMVTVSTIHAAKGLEWPVVFIPAAYNGSIPHIRSEDG----------------DEERRLL 610 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFP-SVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 A+ A+ LY+SY N E+ S + + + L R Sbjct: 611 YVAMTRAKALLYLSYPVVGGYGNGEKVTLSSFLSGVEGHFAVQGPTFNSAVLEELARILR 670 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP 833 KA + + E S P P Sbjct: 671 RKAPSQKDVFGRLKPFEVSMEDDIFPSDPEQDLGIRVHSVIASWQRLKNRAAKPRHWP 728 >UniRef50_A3CVL1 UvrD/REP helicase n=4 Tax=Methanomicrobia RepID=A3CVL1_METMJ Length = 911 Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats. Identities = 81/817 (9%), Positives = 186/817 (22%), Gaps = 151/817 (18%) Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAK--LLTRQRRHSFEDRELPLFRDSEN 282 + L+ L ++ + + + + ++ + E Sbjct: 182 EFLEKLRRYEASLDQHKRLTFNRMVQLAVENLQHRPEVAEHVKYLIVDEYQDINHAQDEL 241 Query: 283 AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDI 342 + VG+P + G D Q + F P+ + +I + Sbjct: 242 IRLIGLGGSIFVVGDPRQTIYQWRGSD----------EQYFEEFTTRYPEAVTIHITENR 291 Query: 343 LELENRAVAGVNIE---EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 E D+ P+ S EV+ + D++ A++ E Sbjct: 292 RSTVAVIETANGFSDTFEDQHYDHMDPVRREQGGAYLAEMQSDITEVDWIADQIQALVRE 351 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 + + DI ++ + + +P F R +P+ + + P + L Sbjct: 352 EK-CSYSDIALLFRSVSTSAP----PFIDEFRRRDIPFVVGGKVGLFRRPEILGIGQL-- 404 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 A L + + + E+ + W ++ Sbjct: 405 -----------FAWLWEDGFWQQGKWSRLPALRGEDLLEEAVVNWNQGIPDLALEASDVL 453 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 W+ + L ++ + +L GL + V Sbjct: 454 NLRRWKDSV----LNSTYDNFSQVFGELLVLLGYHGLDPDDV------------------ 491 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 + + L +L + L Sbjct: 492 RHAVIMANLGRFNTLLTDYETAIMLGGRRRNW-------------ETDLKGLCWY--LNT 536 Query: 640 ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG---FDL 696 + + +++ V + T+ + + + +V + M +P + G Sbjct: 537 YASSKYEEQTGDDIGGVDAVQLVTIHQSKGLEWPLVFVPCMVRQRFPSSMVGKGRTWLIS 596 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG 756 + +R L AL A+ +SY + + + S V ++ D Sbjct: 597 PELFDVAKYEGDLESERKLMYVALTRAKDVAVVSY--FTSMNGRRKGRSAFVGDIEDL-- 652 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 P R+ LP A Sbjct: 653 ---------------------------------------PHVEPLSQRDTLPDHDYATGG 673 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS 876 ++ + T + + + EP + + L Sbjct: 674 AADEL--------RTFSAGEIVDYGKCGYFYRLRHIWG------------YEPGLTDYLG 713 Query: 877 RYQINQQLLNALVEQDDAERLFRRFRAAGDLPY--------GAFGEIFWETQCQEMQQLA 928 Q L + E L A + E + + A Sbjct: 714 YGQTLHFCLREAADLMKNEDLSPMIAVATAVDRNFYMPFMTEGRMEKIKRAAKNHLMRFA 773 Query: 929 DRVIA--CRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ----GMQLWL 982 ++ R ++ + G + + DG + L Sbjct: 774 EKYRDDMLRIREVETRVEFPVQNAIVAGKVDVILHDGDA-VEVRDYKTSDTATTPEDSAL 832 Query: 983 EHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHY 1019 + +Y + + A Sbjct: 833 QVQLYTRGLCVLGETVSRGSVAFLEEAAVDAVDVTEQ 869 >UniRef50_Q9K917 ATP-dependent DNA helicase n=1 Tax=Bacillus halodurans RepID=Q9K917_BACHD Length = 780 Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 58/527 (11%), Positives = 140/527 (26%), Gaps = 89/527 (16%) Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASWG 304 Y ++ LA+ R R ++ + E L VG+ + + Sbjct: 336 AYETLTQNHELLARYQERFRYLFVDEYQDINKVQYELIRLLTQKEKNICVVGDDDQSIYS 395 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK 364 G D + AF ++ + + N+ ++ Sbjct: 396 FRGSD----------PSYIQAFERDYEHAKQIVLKDNYRSSHPIVMCAQNVIHHNKQRIA 445 Query: 365 RPLDPLDSSIT---FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 + + S + + E ++ + + +P ++ S Sbjct: 446 KSVRAQYDSEKAPLLFYPYDEEEEATMILSDIQEKIAS--GTSPSAFAILYRTNVSVRAM 503 Query: 422 IQAVFGSAPADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 + +P+ + + + + ++ L L ++ + + LL L Sbjct: 504 FER-----LVASNVPFRMEQEGESFYQRSTVRKVLAYLRLSVNQDDPKAMEELLPALFLK 558 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 + + Sbjct: 559 KDTLQELKAITIFHDC-------------------------------------------- 574 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 ++L + + L +L L+ + + L F Sbjct: 575 -SLLDALLHLKNVQPFQQKKLKKLLPYFQKLPH----LSPTQAISMIEKHM--GLTDFIK 627 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA--GP 658 M + +I + D ++ + + ++ A Sbjct: 628 KRGNEGNVMDRGSDDLKDLI-----VAANSFATIPTFLDHVSHMIAKHHELKKAPAQEEA 682 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 V + T+ + + F+ V LL +G P A + + GD +++R L Sbjct: 683 VQLMTIHRAKGLEFQHVYLLSAVEGSLPHDYALDAW-------REGDDRPLEEERRLMYV 735 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE 765 A+ AQ++L+IS S++ S V+E++ Q ++ Sbjct: 736 AMTRAQEQLFISVP--SMRRGKNAQRSRFVREMLRNHRQHQRKGVEQ 780 >UniRef50_C5MA33 Predicted protein n=3 Tax=Candida RepID=C5MA33_CANTT Length = 935 Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 56/524 (10%), Positives = 143/524 (27%), Gaps = 55/524 (10%) Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSD--------GEQDVGNPLLASWGKLGRDYIYLLS 315 + ++ + + + VG+P + + Sbjct: 241 VKHVLVDEFQDTNEIQLQLMYRFAQGHVSNPEFQHNVTIVGDPDQSIYAFRHAQSANFKK 300 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDS 372 + ++++ + + + + + + ++ N R + + Sbjct: 301 MEKYYEKMNL------SVSQITLNENYRSTSDILQYSESVMRQQKDRHQKNLRSQNDVSF 354 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEE-DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 + V +P + + + +L + + DI ++ + Sbjct: 355 KPVYKVLDTPAEQARWIVYEIEQLLALPNSPIKFEDIAILFRASSQ-----TKIVEDELR 409 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 R +PY + R+ + + + L + VL ++ P + E+ Sbjct: 410 LRKIPYRLIQGRSFWERKEVVSTMDYLKVCGDENDLFSVLRTINFPA----RSLGEKTAG 465 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM-ESAQGEWQSVLPY 550 + ++ + I+ G+ + L +L GY E ++ Sbjct: 466 PIIAFIEK-NIKNGLSVHDCLRLVANGKDGSKLSTRTRNILKGYVNIIDTAQERMKIMET 524 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE---- 606 L E + + + + EE ++ +F E Sbjct: 525 CSGESLRHEAARLFQDIYDGSTLDKEFRKNAKDYEERRMNVEELSKSFIEFVPREETLPP 584 Query: 607 -------AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 I + + +Q S + Sbjct: 585 YNGEIDGEFTPDKRNFIMQYIESIGLFDSSAVTESGENKGI--ENEEQGENSVVPEFKGI 642 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 ++ T+ + + + VV + G++DG+ P + A S+ +++R F A Sbjct: 643 SLSTIHGSKGLEWPVVFVPGLSDGILPARFAVNSNGDPSK-----SAESINEERRCFYVA 697 Query: 720 LISAQQKLYISYIGRSIQDNSER--------FPSVLVQELIDYI 755 A+ LYIS + PS + ++ D I Sbjct: 698 TTRAKTLLYISGYSSDSGYSYGSNYSRTFHCPPSRFITDIGDNI 741 >UniRef50_B1MZM3 ATP-dependent helicase/deoxyribonuclease subunit B n=3 Tax=Leuconostoc RepID=ADDB_LEUCK Length = 1171 Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 127/1091 (11%), Positives = 279/1091 (25%), Gaps = 203/1091 (18%) Query: 32 PEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSM 91 +V + L + A L + ++ + Sbjct: 33 TVYYIVPNHVKFDSEVDVLRR------------FARLTGQNPDTSLYAQSRLQVYSLSRL 80 Query: 92 SWKLMTLLPQ-----LLEREDFTLLRHYLTDDSDKRKLF----QLSSKAADLFDQY---- 138 +W L+ + + F ++ L D + + +F + L Q Sbjct: 81 TWALLKDMATMQPNVIQGTGLFIMVSDILRDYAAQLPIFARMQSKAGFVTTLVAQLVELR 140 Query: 139 --LVYRPDWLAQWETGHLVE-----GLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQ 191 + D L + L A + AL + + + Sbjct: 141 ASRISPEDLLTILNQESDDDTFLRQTLSGKLRDLAIVADALDKKMGHTYITQQ---EVLS 197 Query: 192 RFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDI 251 F L + + G + Q + L + + GD+ Sbjct: 198 FFATQLATTQLKNVAF----YFDGFNGFTSPETQVMIELMARYPVTV-------ALLGDV 246 Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYI 311 KL ++Q F R ++ Q P A Sbjct: 247 ------EKLGSQQPGDLFYKPMTTAQRLAQFTKIANQQVVWQV---PTQAR--------- 288 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 + I+ + + +F+ + K L Sbjct: 289 -------------------------CLDESIISVMSAWEKLGEYRQFNSENKKTNLAA-- 321 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 V + E++ + R+ +L P L RDI+++ D+ Y+ I V Sbjct: 322 -----FVAENTMVEIQEVARRIRQLLVAQPDLRLRDILILARDLTPYTGHIPEVMQQ--- 373 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT----- 486 LPY + + +HP++E ++LL RF + V+A+L +L D + Sbjct: 374 -FDLPYFLDTDQKMTNHPLVELLLNLLRPAKERFQYQQVMAILKTGLLRPYTDGSLVPEG 432 Query: 487 --EEGLRYLRQWVNESGIRWGIDDDNVRELELP-ATGQHTWRFGLTRMLLGYAMESAQGE 543 + + YL ++ + D L + + + Sbjct: 433 DFFDIVSYLDNYLYANQPFERTWRDLDHPFTLFTVSEDEDDEDARVVLDDKTVNRRIETL 492 Query: 544 WQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 + V+ +S + + +W + + Sbjct: 493 RRFVIDAFDSLQQQLNQAQTMRQAATLIILWLEKYHVTEAI------LSQRDTLLAAGEL 546 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNIC 662 + + + + + + L + L + S + I Sbjct: 547 SRSREGEEVWEMMTQTLDDIVAIDGDERFELEKFKAILVAGFEGATFSGIPNNLDQLTIS 606 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK---------------PKRGDRS 707 ++S ++ + +G P QL +++ + + Sbjct: 607 EAGIVQSNDYQYLFFIGGTRNNLPAQLKSRALINDAERLIVQPALQENSTPKYLQNTAQQ 666 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 + ++ LF AL +A + + +SY S + L+D + Sbjct: 667 QMAEENLLFYGALTAATKNIVLSYPALDA-GGQISDMSPFFKRLVDAFNITVNKVTATPA 725 Query: 768 N------------CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 VK + T +N L A + + Sbjct: 726 TSQALLKYYVGSVRSTLGELVKIAASQQQTSAYQALRNTINQSEPERLERVLSAPNYKNQ 785 Query: 816 AHSEFVQPLPFTLPETVPL--ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE 873 + + + ET+ + L+ ++ +P+ F Q L + R L Sbjct: 786 TETLKPELVQALFGETLNMSISQLESYYNNPLAYFLQYGLALKER---------LTNRLN 836 Query: 874 GLSRYQINQQLLNALVEQDDAERLFRR---FRAAGDLPYGAFGEIFWETQCQEMQQ---- 926 + + +V+Q ++L R +A L EI + Q +Q+ Sbjct: 837 VAQTGTLYHAVFEGVVQQLIIQQLSLRDISQKALQQLVADNMAEITAQPAYQMLQETGKM 896 Query: 927 -----------------LADRVIACRQPGQSME---------------IDLACNGVQITG 954 + +++E + V + G Sbjct: 897 RATQHYLAKVSEILAVNMQRAARVNHAQPKAVERLFGFPNRQSLPALVVSTPQATVHLRG 956 Query: 955 WLPQVQ--PDGLLRWRPSLLSVAQGMQLW--------LEHLVYCASGGNGESRLFLRKDG 1004 + ++ + W ++ L Y + +L + G Sbjct: 957 KIDRLDSQDPSQVYGTIIDYKSNGKHFDWGQAYDGRQMQLLTYWQAAQLSAEQLGIEAIG 1016 Query: 1005 EWRFPPLAAEQ 1015 F +A E+ Sbjct: 1017 GAFFAKIAPEK 1027 >UniRef50_C7HSP5 Putative uncharacterized protein n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HSP5_9FIRM Length = 1139 Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 75/805 (9%), Positives = 212/805 (26%), Gaps = 111/805 (13%) Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 K E +L F++ + + + +KL + + F++ + + +L N + Sbjct: 353 KREENYLDFSDMEHEFIKLLDNEKLQSKLKKQFKYIFFDEYQDSNDIQNYIVEKLKNENN 412 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLE------SSQELDAFVDVTPDNLLHNIQSDILEL 345 VG+ + +G L LE + ++ + D L + + I + Sbjct: 413 LFFVGDVKQSIYGFRNARPELFLKKLEGYDTDSNCLRINLSKNFRTDKDLIDFNNYIFDR 472 Query: 346 E--NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHV-CHSPQREVEVLHDRLLAMLEEDPT 402 + ++ R + D ++ + E L + ++ + Sbjct: 473 LMTRKNSDIAYKDDNHRLNYHFEFDEKYPKVSIKALAKNVSEEA-YLTKEINNLI--NSG 529 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 L +DI +++ +F + +P++ + +E FI++L Sbjct: 530 LEYKDIAILLRSSSK-----AYLFENELKRAGIPFSSDISKISFETVEVEFFINILKYIA 584 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + +L++L + F+ +E+ L + Sbjct: 585 NPNDDISLLSVLRSEI----FNFSEDDLAEIS---------------------------- 612 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 ++ Y++ + L ++ + L Sbjct: 613 -------------LSSEKSHFYKKFKEYEKENENN--LSQKISDFNTIFTDFSYILNFST 657 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 + + FL + + + ++ + D L Sbjct: 658 MYDFANIIFEKSGFYDFLKARDRGEERVKNIEAFIELMDDYDKNNENSLFGFLAYIDNLK 717 Query: 643 QRLDQ---ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL--- 696 + + V I T+ + + FK V L + R + Sbjct: 718 NQKKDNLKASRNLSDDENLVRIMTIHKSKGLEFKAVILPDFSKRFNTRDNSKDMVLDKDL 777 Query: 697 -------------------MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ 737 ++ + + + ++ + AL A++K+ I Q Sbjct: 778 GIGINIADWENKIKISSIKRDLILEKSNLNDKKEEMRVLYVALTRAERKISIIGKKDLNQ 837 Query: 738 DNSE--------RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 E S + ++ + + ++ D + F Sbjct: 838 KGLEKILNANSVLDLSSYMDWILKILCDDKIMSD--FIDIDYKTDAFNKGFLEIKYIEDF 895 Query: 790 DPQNYQPGERQSY---AREWLPAASQAGKAHSEFVQPLPFTLPETVP--LETLQRFWAHP 844 + A E+ + + F + +++ + + + + Sbjct: 896 IEDYKKDYTDVEKLIGADEYNQKIYKDIEEVFNFSYKNKENINKSLKKSVTEIAKNYDLS 955 Query: 845 VRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL----VEQDDAERLFRR 900 + + + N + P+ E L + + ++ L + + E+ + Sbjct: 956 KDGYEKSPFEENEAFYEFRKPNFEEIKLSATDKGTLIHKIFQELEVKSYDLNSLEKEINK 1015 Query: 901 FRAAGDLPYGAFGEIFWETQCQEM--QQLADRVIACRQPGQSMEIDLACNGVQITGWLPQ 958 G + I +E + + D + + + + + G + Sbjct: 1016 LVDLGKIKKEYLPYINFENILGFFNSKIIQDLMKKSPKIRKEESFLRKIDDFYVNGQIDI 1075 Query: 959 VQPDGLLRWRPSLLSVAQGMQLWLE 983 + + Sbjct: 1076 MFESQN-EVVLMDFKTDSIKREGFY 1099 >UniRef50_A8ZXL9 UvrD/REP helicase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZXL9_DESOH Length = 1132 Score = 169 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 72/644 (11%), Positives = 149/644 (23%), Gaps = 101/644 (15%) Query: 146 LAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPP 205 L + + + + L K +++ + I + + A P Sbjct: 558 LGLLREQGGFDAVVLDEYDRRILAKTVLKRAAAGKADGLPGPDRLLDMIASAKQAMLGPG 617 Query: 206 GLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQR 265 S V L QAL CR R Sbjct: 618 DDLSGVARETAPDLLATLYGDYQALLAENSGCDYEDLICRAVDLLEGHKDVRQTAQQRFV 677 Query: 266 RHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELD 324 ++ + L + +G+P A +G G Y Sbjct: 678 YIFVDEYQDVNHAQYRLIQALAPAGGNICVIGDPDQAIYGFRGASAAYF----------Q 727 Query: 325 AFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD----SSITFHVCH 380 F P ++ + + A ++ D R D +T Sbjct: 728 TFETDYPGAARFFLEKNYRSTQTIVSAAYHVITGQDDDPGRVRVYSDIAGVPVVTVARLA 787 Query: 381 SPQREVEVLHDRLLAML---------------EEDPTLTPRDIIVMVADIDSYSPFIQAV 425 S + E + M+ E L D V+ V Sbjct: 788 SERAEAVFAGRTIERMVGGLGFHSVDFGKAGYEAPAGLGFADFAVLCRTRRQ-----TEV 842 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 F +P + ++ + + ISLL L + + D + A + Sbjct: 843 FADVLESAGIPCHVVSKQRIYAARGVGEAISLLRLAEGQATFID--------LEKAGGVL 894 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 + ++ + V + R+ + Sbjct: 895 YGATAAKKQAVISAWAKERNLPAAEVLAATERFPVPGLSQAAQRRLAGAARTVAELKART 954 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 LP L L+ + + + Sbjct: 955 GHLPVAG----------RLRFLIENMEPLATLVNGSK----------------------- 981 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLM 665 + + A + A L + + V + TL Sbjct: 982 -----KNREAFDAAVEAARPAGTDATAFFDT------VALAADADAVMPGVDRVRLMTLH 1030 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + F VV + G + + P + D++R LF A+ A++ Sbjct: 1031 AAKGLEFAVVFVAGCEEDLVPFSGYGD------------RATDIDEERRLFYVAMTRAKE 1078 Query: 726 KLYISYIGRSIQDNSERFP--SVLVQELIDYIGQSHYLPGDEAL 767 +L++++ + S V ++ + + + Sbjct: 1079 RLFLTWAKNRTLYGKRKACTLSRFVADIEGDLKEQAEVETGRPP 1122 >UniRef50_Q6C4F2 YALI0E27269p n=1 Tax=Yarrowia lipolytica RepID=Q6C4F2_YARLI Length = 820 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 61/515 (11%), Positives = 143/515 (27%), Gaps = 73/515 (14%) Query: 263 RQRRHSFEDRELPLFRDSENA---GQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLES 319 ++ + E + +G+P + + + Sbjct: 229 EVETVLVDEFQDTNKIQMELVDLFSRHTPQRSITVIGDPDQSIYKFR----------FAT 278 Query: 320 SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD------NKRPLDPLDSS 373 + D+ PD + + + + + S +++ + D + Sbjct: 279 ERNFQEMRDMYPDTEVVFLTENYRSTDPILAIAEEVISQDASRYGGCGQSRKLVGHSDFA 338 Query: 374 I--TFHVCHSPQREVEVLHDRLLAMLEEDPT-LTPRDIIVMVADIDSYSPFIQAVFGSAP 430 + + +E + + + + + L I ++ ++F A Sbjct: 339 VTPELTKYANKYKEAVGVAETIRDLRKVTKNRLPLSSIAILCRTNRQ-----ASMFEEAL 393 Query: 431 ADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + + ++ L S + ++ P R ++ + Sbjct: 394 VAGNTACYLAEGGANFWDKSHIRIVLNYLRCAYSDEDRSAFMEAMNNP----RRRLSGKT 449 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + Q+++++ D + + + LL S +G Q + Sbjct: 450 AMLISQYLDDNYGGPNSVYDLLHD------------AAHRKGLLNITQPSFEGLRQFMDH 497 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 D LI ++ ++ L + GL + + L+ Sbjct: 498 IDHLRDLINSKEYYMDEVIEYLLD-KVGLDEYITTMGVREKAYERLSEVGQISDRFSVIT 556 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + E G PL + A R D V I T+ + Sbjct: 557 EAADNNL--WDNEVSGDISEQLSPLGQFLNAQALRADNS----GNAENGVIISTIHRAKG 610 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + + VV + + DG P ++ D ++R LF AL A++ LY+ Sbjct: 611 LEWPVVFVPNLLDGDLPMRMPDTDID---------------EERRLFFVALTRAKRLLYM 655 Query: 730 SYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 SY E PS + E + + + + Sbjct: 656 SYS-------REGEPSTFITENVSALTSTPTWTTE 683 >UniRef50_A3CVM8 ATP-dependent nuclease subunit B-like protein n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CVM8_METMJ Length = 1049 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 96/713 (13%), Positives = 189/713 (26%), Gaps = 106/713 (14%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + + EV + + ++ + P +I V D S P+++ VF Sbjct: 284 VRLAERRDREGEVRAIAQEIRDLVAA--GVRPDEIAVAFPDFASALPYVEEVFPD----F 337 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PYA SD RA + P++ A + + +P + EDV+AL P L L Sbjct: 338 GVPYAASDGRALSASPLVRALLDVAMVPARGYRREDVVALATSPYLPFTGGC---ELDIF 394 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + + W + G+ L + + Sbjct: 395 SREARITAGNWDERLAALARAAGEERGRPDTPESAKSRLAEKVAAIESARKTVRELFADL 454 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 S L E LA + E+ +A + I Sbjct: 455 SAL--EATKTLAGHIAAYRSVLERWQAPAMPED-------GDPDLLEDEARNLGGFSGIL 505 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + + + + L+ LAQ R +R G V + + + + Sbjct: 506 AALERLARLL----PDEKMSLAEFSSLLAQVAAGTRTGRRRSNGGVRVVGVREVAHLAVP 561 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD---DDRYLFLEALISAQQKLYIS 730 + + G+ +G PR L F ++ + G RSR D ++RY F AL+SA+ ++Y+S Sbjct: 562 YLFVGGLVEGTMPRLTTRLPFTTDAETRRLGTRSREDILREERYYFTAALLSARTRVYLS 621 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 Y S V + + + D + + R A L + Sbjct: 622 YPAAEGAT--PLVHSGFVDAVREAFSPETWGSNDFPDSGLAAARRAGALLARGEFPVGMP 679 Query: 791 PQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP---------ETVPLETLQRFW 841 + E + + + P L L+ + Sbjct: 680 CPIPVREAVRRLNIENYHRKAGYDSPYDGMLDDDPAILAALAERFGEGAVFSPTALETYA 739 Query: 842 AHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD--------- 892 P R + + L + E L R + ++ Sbjct: 740 DCPFRFYLERVLGLAPLPEADPD-------LTAQERGSLVHRIAYRFYSGWTCDGNGPVT 792 Query: 893 ----------DAERLFRRFRAAGDLPYGAFGEIFW--------ETQCQEMQQLADRVIAC 934 + + + + + V A Sbjct: 793 GACYADALRRILDAGREEADRFTFETPAWAADKEHLLGSPAAGKGVLERFLRHEAEVAAS 852 Query: 935 RQPGQSMEIDLAC----------------------NGVQITGWLPQVQPDGLLRWRPSLL 972 R + E+ +++ G + +V R+ + Sbjct: 853 RFVPHAFEVSFGLPLVPGEVDAVSIPDAVAIPLGEETIRLRGRVDRVDVLTDGRFMITDY 912 Query: 973 SVAQGMQLW--------LEHLVYCAS------GGNGESRLFLRKDGEWRFPPL 1011 L+ +Y + ++ + GE P+ Sbjct: 913 KTGSSHPRLRDIEAGKALQLPLYLRAVETLTGREGVAGTYYILRRGEVTNKPV 965 >UniRef50_C4LK53 Putative ATP-dependent DNA helicase II n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LK53_CORK4 Length = 1226 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 113/979 (11%), Positives = 214/979 (21%), Gaps = 214/979 (21%) Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L + +I T R Y P +L R ++ + + LF S Sbjct: 264 LMTYGQITAKATQLVRKY------PEIGQELRMRYHAIFLDEYQDTNYAQHAFLSSLFGS 317 Query: 290 DG-------------EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLL- 335 VG+P+ + +G G L L+ F L+ Sbjct: 318 QSDLEEKGSVDKPVGVTAVGDPMQSIYGFRGASPGNLYQFLDD------FPRYQGGVLVP 371 Query: 336 ---HNIQSDILELENRAVAGVNIEE---------------FSRSDNKRPLDPLDSS---- 373 + + I S L Sbjct: 372 CEKRALSQSFRNPDEVLELANAISHDALSGGEGCGFDAVDADSSALAPTLSSGKKGSAGV 431 Query: 374 ITFHVCHSPQREVEVLHD-------RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 ++ + EVE + D + + P ++V D +P F Sbjct: 432 VSVKWALDERDEVEWVADVFEQEYRSAMQNKSQGEPTKPFTGAILVRKNDHITP-----F 486 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 A R +P + P + +S+L + E L +L P R+ + Sbjct: 487 AEALMKRGIPV-GMSPDSLDDIPEVREVLSVLRVVVDPSDDEATLEVLSSP----RWRMG 541 Query: 487 EEGLRYLRQWVNES-----GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 ++ L + + + + L ++ A Sbjct: 542 TRDIKTLSNRAKDLARGSDNQSGTRKSKHKEIDSIEVFEEKANELELPGDGTEVSLADAI 601 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML-----N 596 + S E L +L +L RR + PL + L L Sbjct: 602 ADLGISSDQGNKSAFSNEGRMRLQALSAELRWLRRQ-SMTVPLPDLLAQIESTLSIRTEV 660 Query: 597 AFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL- 655 +E AA T+ + + + + + L + + Sbjct: 661 LARQDPSEDGAAGTIHLDRLRDVAEDFTAHGGST----QEFLEYLRAADEAPGTTIEAGE 716 Query: 656 ----AGPVNICTLMPMRSIPFKVVCLLGMNDGVY-------------------------- 685 + V I T+ + + + VV + +D Y Sbjct: 717 VSVHSDQVQILTVHSAKGLEWDVVAVPFCDDSTYNSPDLSSGSKQKKGKKKGNWTGTWLR 776 Query: 686 ---------------PRQLAPLGFDLMSQKPKRGDRSRRDDDR-------------YLFL 717 P ++ D + + +LF Sbjct: 777 SSKILPSALRGDPRSPANPLGFPVFKDTELATWKDIQSAEKEYKKEIQSVDIRDSDFLFY 836 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPS-VLVQ------------------ELIDYIGQS 758 A+ + ++L +S + + S Q EL + Sbjct: 837 VAITRSARRLLVSGHSVNPASKNYLQKSHRFFQVQNIVAGKLGIDVNARFEELQATHAEE 896 Query: 759 H---------YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 P + V P DP + A A Sbjct: 897 PLRITAHSGGDHPTWNLDLTEPPLETVSDEPQSEAPIWPSDPLGERREAVDKAAELVRAA 956 Query: 810 ASQ-AGKAHSEFVQPLPFTLPETVPLE---TLQRFWAHPVRAFFQM-----RLQVNFRTE 860 ++ P P T+ A+ L++ Sbjct: 957 MEDLKAESADPGKGYTPQADPGTLAATWENETTALIEEARAAYVSHTDVPLGLELTTSEM 1016 Query: 861 DSEIPDTEPFILEGLS-----------RYQINQQLLNALVEQDD--AERLFRRFRAAGDL 907 D E F R L A + + Sbjct: 1017 MLASADPEAFARRRARPVPFKPNPYAKRGTAFHNWLEAELGGASALIDDDELLGAMEDSD 1076 Query: 908 PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ------- 960 + + + + L G I G + + Sbjct: 1077 DDIPISQPELDHLKKAFMK--SPWAGKTAWDVERPFTLNLGGYFIRGRMDAIFKSEKNGT 1134 Query: 961 -PDGLLRWRPSLLSVAQGMQLWLEHLVYC--ASGGN-----------GESRLFLRKDGEW 1006 ++ W+ Q M+ L A + ++R + + Sbjct: 1135 PEWFIVDWKTGKKPTGQDMKRAEIQLAMYKEALRRQLADTGTPNATIRAAFHYVRLNETY 1194 Query: 1007 RFPPLAAEQ--ALHYLSQL 1023 L + A LS L Sbjct: 1195 EPTDLPSPDELAQSVLSTL 1213 >UniRef50_Q189U3 Putative ATP-dependent DNA helicase n=8 Tax=Clostridium RepID=Q189U3_CLOD6 Length = 688 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 52/534 (9%), Positives = 141/534 (26%), Gaps = 86/534 (16%) Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 + + R Y+ + + + L + + ++ + E Sbjct: 177 YNLYEEQKSKVNKIDFDDMLIRTYYLLLNNKSALEMVRNVYKYILIDEFQDINKVQFEVL 236 Query: 284 GQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDI 342 + + + VG+ + +G G +LL F + + + Sbjct: 237 KLICSPLNNIFAVGDEDQSIYGFRGARPDFLLE----------FEQYFNNTKKIILDINY 286 Query: 343 LELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 + + + S+T+ H + E + ++ +++ Sbjct: 287 RSKSEIVHTANRLIDKNKNRYEKIIKCSQGDGGSVTYISPHDSEEEALYIAREIIDEIQK 346 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR-ARQSHPVLEAFISLL 458 D + D V+ D +P+ + D H + ++ L Sbjct: 347 DY-VEYSDFAVIYRTN-----IQSRALVDVFMDMRIPFVVKDSVITIYDHWASQDILAYL 400 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + + ++D L +++ P I+++ + V + + Sbjct: 401 RIGINPKSNKDWLRIINKPF----RYISKDSI----NMVKDEKDFITALINKCNLHPKQV 452 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + L+ + + S+ + L+ LN Sbjct: 453 KTINDLEIDLSYLNTLNPKNAISYIRTSLDYDRYVLDYCSNRKIKTNGLVEILNELESSA 512 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 + E+L + + + Sbjct: 513 TNFNTVTEFLEHIDRVKTELTENNKNKQ-------------------------------- 540 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 V T+ + + F+ V ++G+N+G P + + Sbjct: 541 -----------------TEGVIFTTMHSAKGLEFRNVYIIGVNEGTIPHEKSYDICKEEK 583 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 ++ + + R L A+ A++KL IS + + S+ + ++ Sbjct: 584 KEEQLEEE------RRLMYVAITRAEEKLCISSTLN--KYGKKVDKSLFINDIK 629 >UniRef50_B8FB90 UvrD/REP helicase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FB90_DESAA Length = 638 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 41/515 (7%), Positives = 129/515 (25%), Gaps = 95/515 (18%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 +P + + ++ + ++ L VG+ + +G G ++ Sbjct: 209 EPEIRDVIAKKYDYIMVDEYQDTNLIQADILRYLGEGHQNVMVVGDDCQSIYGFRGANFE 268 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLD 368 + F DV P + ++ + + I S Sbjct: 269 N----------IMRFPDVFPGTKIIRLEENYRSYQPVLDVTNKIVKQATRKYSKTLFTNL 318 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 ++ + + + D + + +D + R+I V+ + + Sbjct: 319 QGGAAPVLVSTRDENSQSQFVVDEVKRLQSQD--VPLREIAVLFR-----AGYQSFDLEV 371 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + + ++ + L + Sbjct: 372 ELTRAGIKFVKYGGFKFMESAHIKDALVHLRIAAFPTDKLSW------------------ 413 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + L L G T + ++ G L Sbjct: 414 ---------------------HRALLLLNKVGPKTAQTLSDKICSG-----------PGL 441 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + + L L+ ++ + + + + + + + Sbjct: 442 AAVKPAPSYKSGFNALRDLIKDIS------RPGQKVADVGKKVLEYYRPYLESNFDNWPK 495 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 Q +++ ++ + ++ + + T+ + Sbjct: 496 RQKDLDQLVSMMERYGADLAKFIHDVT--LEPPTSTVEDVLAVGEAPPDRMVLSTIHSAK 553 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + ++ V ++ DG +P + A + +++ L A A+++L+ Sbjct: 554 GLEWEAVFVIWTLDGRFPSRQAV-----------AKEGESLEEELRLMYVAATRAKKELF 602 Query: 729 ISYIGRSIQDNSER----FPSVLVQELIDYIGQSH 759 + + D + PS ++ L + + Sbjct: 603 FVHPT-DVFDAASMTYLYRPSRFLERLPRTVLRRE 636 >UniRef50_A0LVT8 UvrD/REP helicase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LVT8_ACIC1 Length = 1095 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 101/952 (10%), Positives = 209/952 (21%), Gaps = 121/952 (12%) Query: 131 AADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALV-------EYTHQLGQPR 183 A F Y + + G L A Q + + L+ Sbjct: 101 LARTFHSYA-FGVLCADAIQRGEPPPRLL-TSAEQDVIIRELLRGDLDRGATGWPERLRP 158 Query: 184 WHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNP 243 + R + P V G A ++ + ++ ++ L Sbjct: 159 ALPTRGFARELREFLQQAVQRGLTPDDVARLGRQAGRDDWVAIGRFAREYSQVTALRDAA 218 Query: 244 CRYYWGDIKDPAYLAKLLTRQRR--------HSFEDRELPLFRDSENAGQLFNSDGEQDV 295 I L + + ++ E + + Sbjct: 219 GYDPAELILAATALLQEHPQLLESCRVRHALVVVDEYEETDPAQRRLLRAITSGAALVIA 278 Query: 296 GNPLLASWGKLGRD---YIYLLSDLES--SQELDAFVDVTPDNLLHNIQSDILELENRAV 350 +P + +G G D LSD + + L + E V Sbjct: 279 ADPDQSVYGFRGADPLGVREFLSDFADQRPRVVVLGRAYRGGPALLAAVRRLAERLPVVV 338 Query: 351 AGVNIEEFSRSDNKRPL-----------------------------------DPLDSSIT 375 R D S+ Sbjct: 339 PPGVSAAAYRGLAVGAEAGAVRALAGAGAGVAGAGAAAADGDGSVDVRAGAGADGDGSVD 398 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 +P + + L L + V+V P A + Sbjct: 399 VRAFATPGAQAAYIAYHLRHAHLV-EGLGWTAMAVLVRSAAQIPP-----LRRALTAAGV 452 Query: 436 PYAISDRR-ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 P + ++ P++ + L + + P+L T Sbjct: 453 PVRVPEQSSPIVDVPIVRHLLLALRIAAGQ------------PLLDVERAPTAAASLAEE 500 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 G + +R +L + E + Sbjct: 501 LVAGPIGRADPLQLRRLRIALRRLDRAAGGERSSAVVLAQVLNDPRDLEVIDEQAAAPAL 560 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 + + ++ L + + A + + + Sbjct: 561 RVARAIEAGRRAVTEPAATAETVLWEIWNATGLATELYAQALSGGAVGAAADRDLDAVMA 620 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 + A A + + ++ V++ T +S + V Sbjct: 621 LFAAASRYVDRLPRAGAALFADYL-LGQEIPTDTLAARAPEPDGVDLLTAHAAKSREWDV 679 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQ---------------------KPKRGDRSRRDDDR 713 V L G+ +GV+P + + + ++R Sbjct: 680 VVLAGVQEGVWPDLRRRGSLLGLRDFLDVLDGRIADAADRGPGGSIRTLEERSAALAEER 739 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 L A A++KL ++ + + PS + ++ L S Sbjct: 740 RLCYLAASRARRKLIVTAV-----SGDQEIPSRFLDDIDPLDADERPLTRPPRGLDLPSL 794 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF-TLPETV 832 + + G QPL P V Sbjct: 795 LGDLRRAAETADDAVARRAAGHLAQLAAAGIPGAAPDGWYGLPAPSTDQPLRRDDEPVPV 854 Query: 833 PLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD 892 L+ F P+R + R S + + + ++ L ++ Sbjct: 855 SPSRLELFTRCPLRWLLESCGG---RGRSSASQVVGTAVHRAAATFSVDVAQLRERLDAA 911 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA--CRQPGQSMEIDLACNGV 950 A+ DL G F + +++LA + R + + Sbjct: 912 LAD---------TDLGTGWFAAAQRDRAAAMVERLAAWMARNPRRLLAVERDFQVTVGRA 962 Query: 951 QITGWLPQVQPDGLLRWRPSLLSVAQ---GMQLWLEHLVYCASGGNGESRLF 999 +TG + +++ D R L + EH A F Sbjct: 963 LLTGRVDRLEQDDDGRLYVVDLKTGRRAVRKADLAEHPQLGAYQVAVVEGAF 1014 >UniRef50_Q65LJ9 ATP-dependent helicase/nuclease subunit A n=3 Tax=Bacillus RepID=ADDA_BACLD Length = 1230 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 92/922 (9%), Positives = 216/922 (23%), Gaps = 167/922 (18%) Query: 174 EYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKH 233 + + ++ +E+L L V G +A+ Sbjct: 312 AKKQLEKLKSDYFSRTPEQHLESLREMKPVIQTLVQLVLEYGRRFAEAKKEKAIVDFSDL 371 Query: 234 IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD--- 290 L + + G+ + ++ + + + Sbjct: 372 EHDCLAILSV-KNPAGEAVPSEAAKFYRHQFHEVLVDEYQDTNLVQEAILKLVAKEEHEG 430 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPD-NLLHNIQSDILELENRA 349 VG+ + + + + LS + + + D N +SDIL+ N Sbjct: 431 NLFMVGDVKQSIYRFRLAEPLLFLSKYKRFTDDGSGSGQKIDLNKNFRSRSDILDSTNFL 490 Query: 350 VAG-----------VNIEEFSRSDNKRPLDPLDSSITFHVCHS------------PQREV 386 E + P + + + S Q E Sbjct: 491 FKQLMGEKVGEVEYDEQAELKLGASYPPNEATKTELLLIETPSGAPGEEAEELEAVQLEA 550 Query: 387 EVLHDRLLAML-----------EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 + ++ ++ + + RDI+V++ + ++P I + + Sbjct: 551 RAMAGQIRRLITEKFQVYDAKAKASRNIQYRDIVVLLRSM-PWAPQIM----DEFKQQGI 605 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 P + + +SLL + D+ + + ++L PV+ Sbjct: 606 PVYANLSTGYFEATEVSVTLSLLKIIDNAYQDIPLASVLRSPVVGLD------------- 652 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + L + ++++ Y ++ Sbjct: 653 --------------------------------ENELSLIRIKDKKAPFYEAMKAYLAAAD 680 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 L L L WR E + RD ++ + Sbjct: 681 GDERLSEKLRRFDGLLKKWRAYAKNHSVAELIWEIYRDTKYLDYVGGMPGGKQRQANLRA 740 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFK 673 + + + +R D + V + T+ + + F Sbjct: 741 LYDRARSYEATSFRGLFRFLRFIERMQERGDDLGTARALSEQEDVVRLMTIHSSKGLEFP 800 Query: 674 VVCLLGMNDG----------------------VYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 VV G+ ++P+ + K+ R + Sbjct: 801 VVFTAGLGRNFNMMDLNKSYLLDKELGFGTKFIHPKWRISYPTLPLIAMKKKLRRELLSE 860 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQ-----DNSERFPSVLVQELIDYIGQSHYLPGDEA 766 + + AL A++KLY+ + + ++ S + + YL Sbjct: 861 ELRVLYVALTRAKEKLYLVGTAKDKEKLLADWRTQAAGSEWLLPDYERFQAKSYLDFIGP 920 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 + + P +Q + + + H VQ Sbjct: 921 ALMRHRDMDESGAPPVIDEIRE-HPARFQVSWLSAADLQAEAVDQAGEERHDRLVQIQMG 979 Query: 827 TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI-----------------PDTEP 869 E Q ++ +V + SE+ P E Sbjct: 980 HAIEGAFEYEQQVRERLAWSYPYKDAAKVRTKQSVSEMKRQKEYEDEYGDRSLIRPSQEA 1039 Query: 870 F-----------ILEGLSRYQINQQLLNALVEQDDAE-----RLFRRFRAAGDLPYGAFG 913 L R ++ + E RL R L Sbjct: 1040 LLFKRPSFMMAKGLTAAERGTAMHTVMQHIPLTRTPEKNELSRLLDRLVEKELLTEDQRA 1099 Query: 914 EIFWETQCQEMQ-QLADRVIACRQPGQSMEIDLAC-------------NGVQITGWLPQV 959 I + ++ ++ R+ + + ++ V I G + + Sbjct: 1100 AIEEDDILAFFDTEIGQKLFGARRVEREVPFNMTLSAKEVYPDLESADEPVLIQGIIDCL 1159 Query: 960 QPDGLLRWRPSLLSVAQGMQLW 981 + + + Sbjct: 1160 FETEDGFYL-LDYKTDRIHGKY 1180 >UniRef50_A8YVK1 ATP-dependent helicase/deoxyribonuclease subunit B n=27 Tax=Lactobacillus RepID=ADDB_LACH4 Length = 1160 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 135/1094 (12%), Positives = 292/1094 (26%), Gaps = 197/1094 (18%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMT---LSQKFG-- 55 M+++ + D L+ + P I+V + L+ Sbjct: 1 MIKIITGRQTDPLQEKILATAIENYQQHPENETFIIVPNHIKFTTEVRAINKLASSKKQT 60 Query: 56 --IAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRH 113 N+ + W +P + L + LL H Sbjct: 61 ETAVKNLHVLSFSRLAWFFLKDAEQGLPTQ------------------LDDAASAMLLTH 102 Query: 114 YLTDDSDKRKLF--QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKA 171 + D+ +F S L++ L ++ ++ + E Q Sbjct: 103 IIEQKQDELIIFEQSNSGMVRQLYN-------TILQVYDGNLDLDNIDETNLDQ------ 149 Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 + +Y FIE + S V +Q L Sbjct: 150 ------ETKSKIHDLRIIYDAFIEEIAGK---------------FSTKNEVQVQLNDILA 188 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 K+ E+ C + +++ + L+ + + + +L N + Sbjct: 189 KNSELKNASFYFCDFSHFSLQEMLTIQILMRKAKNVTLA-----------FKTRLGNINP 237 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 + + G+ + L+ + L D + E + Sbjct: 238 KAEAGDYDYVI----QQTIRRLV------------------SFLQERDMDYVASEFPIPS 275 Query: 352 GVNIEEFSRSDNKRPLDPLDS--SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 E S + +D + S E + + + + RD + Sbjct: 276 EPTPREILNSLWTETVSKVDELKQVQLVKADSRYAEAYFVARTIYQQVALN-NYRYRDFL 334 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD---SRFV 466 ++ D+ Y ++ + +P+ ++ + HP++ +L +L D + F Sbjct: 335 ILAPDLKEYETYLTPI----LRQNNIPFFNDLQQEMKYHPLVVLIENLFNLRDLKENPFQ 390 Query: 467 SEDVLALLDVPVLAARFDITEE----GLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 ++ +LA+L +L + E + L +V GI + + + + Sbjct: 391 TQSMLAILKTHLLIPSWYKEEAEYIHDVDELENFVLAHGINHNLWKKHFADFVSAEVIR- 449 Query: 523 TWRFGLTRMLLGYAMESAQG--EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 L ++ A V + L + Sbjct: 450 -----LDKIDEEVAKIDRLRGYLVDKVTNLFTKLEQEKDSQKALTIFFD----FLTKNGI 500 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 LE+W + D + + ++ + L + L + Sbjct: 501 AERLEQWRDAANN------AGDLQQAQQPEQLWDLLIQLLKDYLAINP-EKFDLDEFFNM 553 Query: 641 LAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD---- 695 L + SQ VN+ + +++ +K V ++G G P GF Sbjct: 554 LISAFKEATFSQIPSTLDAVNLSEMGMVQTSGYKQVFIIGATSGNLPSIEKKPGFLTTEN 613 Query: 696 ------LMSQKPKRGDRSRRD--DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 D R + D Y F +L AQ ++YISY + N + PS+ Sbjct: 614 LNQLQSSFESDAYLEDNQRLNNLDQNYQFGLSLALAQDRVYISYPVLNA-SNEKLDPSIY 672 Query: 748 VQELIDYI-----GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 Q L DY E L+ + +L +++ + + Q Y Sbjct: 673 YQRLQDYGAPEFSQHDLPEKMQELLSFITNPDASLGYLAYINSNTSDEAIDELLKITQKY 732 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETVP-------LETLQRFWAHPVRAFFQMRLQV 855 + + A A + + L + + L+ F+ + F L++ Sbjct: 733 LPQKVKAVLDASD-FDNQPEDIGEDLAAELYGKNLYSSVSQLETFYENSYEYFLTYGLKL 791 Query: 856 NFRTEDSEI-PDTEPFILEGLSRYQINQQLLNALVEQDDA------------ERLFRRFR 902 R E+ + E R + ++L ++ D + + Sbjct: 792 RRRLENEFDVIQAGNYFHETFDR--LVKRLNEQHIDLADLSSVELEQQLNQVRDVIKDES 849 Query: 903 AAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ----SMEIDLACN---------- 948 L F + + ++A E+ + Sbjct: 850 KYAQLMNDPFNQYLFHCLDHTTSKVAQNWRKSLAETPLRAKYSELSFGLDQKIKGISLDI 909 Query: 949 -------GVQITGWLPQVQ-----PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGES 996 V + G + +V + + + + Y S Sbjct: 910 PDLPGNHQVNLRGKIDRVDLANFAEKDQVLAQVIDYKSSAKKFDLG--MFYNGIALQMIS 967 Query: 997 RLFLRKDGEWRFPP 1010 L + + F Sbjct: 968 YLDVLTNNNRFFAE 981 >UniRef50_B5YD55 ATP-dependent DNA helicase n=2 Tax=Dictyoglomus RepID=B5YD55_DICT6 Length = 656 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 62/532 (11%), Positives = 147/532 (27%), Gaps = 102/532 (19%) Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAK--LLTRQRRHSFEDRELPLFRDSENAGQ-LFN 288 + E+++L + ++W + + + L R ++ + + E Sbjct: 202 RKRELNVLDYDDLLFFWYRLLLESEKTRKILNDRFLYILVDEYQDTNWLQGEIIRLTREE 261 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR 348 + VG+ + + G +LS F ++ P + + + Sbjct: 262 NKNILVVGDDAQSIYSFRGATIENILS----------FPEIFPGTRIFYLVFNYRSTPEI 311 Query: 349 AVAGVNIEEFSRS---DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 I + + +P+ S + E + + + + + + + Sbjct: 312 INLANEIIKRNTRQYFKEIKPVLKSGSKPKLVWVRDDEEEAQFVVEVIKELHK--EGVKY 369 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 +DI V+ + + +PY + ++ ISLL + + Sbjct: 370 KDIGVLFRSN-----YHSMAVQMELTLQGIPYEVRGGLRFFEQAHIKDMISLLKILFNPQ 424 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 I + L Q + ES Sbjct: 425 DEISAQR-----FFKLFPGIGRAYAKKLSQVLKES------------------------- 454 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 + +Q GL +L + + + + E Sbjct: 455 ------------KDFDKIFQMQFSGRTLEGLR---------ILKNIWDKIKVIPVQNFSE 493 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ-- 643 + + + Q + L EL Sbjct: 494 ILRVFFNEYYKDYLERNYPDFKDREKDVDQLILLSERYDD--------LEKFLSELTLYT 545 Query: 644 -RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 ++ + V + T+ + + + V +L + G +P + Sbjct: 546 YAGEKLLEEEEEEKDFVVLSTIHQAKGLEWHAVFILRLVQGDFPSYKSMD---------- 595 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLY-ISYIGRSIQD-NSERFPSVLVQELI 752 +++R LF A+ A+++LY I+Y+ R ++D N PS+ ++EL Sbjct: 596 -----NIEEERRLFYVAVTRAKRELYVITYLTRKVKDMNVFTKPSIFLEELP 642 >UniRef50_UPI000038E52F UvrD/REP helicase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E52F Length = 924 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 66/764 (8%), Positives = 167/764 (21%), Gaps = 162/764 (21%) Query: 262 TRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESS 320 R R ++ + + L VG+ + G D +++ Sbjct: 216 HRVRHIIVDEFQDVDKLQNTLLELLSPVTESICVVGDDDQGIYHWRGTDVGLIMNFSNPE 275 Query: 321 QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD--------S 372 + ++ E + S + + Sbjct: 276 NSAKCTD--------VALNTNFRSTRAVVELSRQFIENNGSRLPKGMTENPGLKRKYEEG 327 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEED--------PTLTPRDIIVMVADIDSYSPFIQA 424 I + + E++ + ++ ++ D +L+ D V+ I Sbjct: 328 DIQSCEFENEKDELDFIVSKIGELVGTDFLDRNNKPFSLSLSDFAVLTRTNKWAKKIIDR 387 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 +P + P +E + ++ R+ Sbjct: 388 -----LDREGIPSVAYSGESIFERPEVEFALH---------------SIAYTFECKIRYG 427 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 + L + + ID + + + R +L Sbjct: 428 KGNYRVPDLSELSGMYSRIFTIDHFPRADTGIFSRNIAALRKEAEDILS----------- 476 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 + Y GL + + M F + Sbjct: 477 KGTKDYLGDLGLQGFYH---------------------------RILQAMGADRFDFGEK 509 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-AGPVNICT 663 + + + + + + + + + Q V I T Sbjct: 510 YNYNLACLSRAISDYESVWIRLRASEVKWFFTFMGVYGKSEYTDPQHQDPSIINAVKILT 569 Query: 664 LMPMRSIPFKVVCLLGMN--DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 + + + F VV + + P + S++ D +D+R ++ A Sbjct: 570 IHKAKGLEFPVVFVPDFIKPNHRTPDRNFVDNVLYDSERYTGTD----EDERRVYYTAFT 625 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 +++ L++++ R ++EL + Sbjct: 626 RSEKYLFMTWSRFPEGGVRPRKHHPFLEELPE---------------------------- 657 Query: 782 CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFW 841 +++ Q K+ S + T + L + Sbjct: 658 -----------------------KYISGPMQLKKSRSGYPDRRTATGEYSTSYSELTSYL 694 Query: 842 AHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRF 901 P + N I L + + + D + + Sbjct: 695 RCPNDFLLRNVYGYNA--GVPAGFGYGTNIHNVL---NMIHRDYIRNEKVPDMDEVVAMV 749 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQLADRVIA------CRQPGQSMEIDLACNGVQITGW 955 L Y + + +++ +A R + I G Sbjct: 750 DRMFHLRYATDAMS--DNMKKAAERVVRSYVAEHSKDFSRILETEKRFEFVLGEALIAGQ 807 Query: 956 LPQVQPDGL----LRWRPSLLSVAQ----GMQLWLEHLVYCASG 991 + ++ + + L Y A Sbjct: 808 IDLLKKTNPDGSLKEVEIIDFKTEKIDGVYSADYDRQLRYYALA 851 >UniRef50_B3E1Z6 UvrD/REP helicase n=3 Tax=Geobacter RepID=B3E1Z6_GEOLS Length = 1082 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 80/649 (12%), Positives = 163/649 (25%), Gaps = 135/649 (20%) Query: 146 LAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPP 205 L Q + + ++ Q L + E R+ + Sbjct: 550 LEQLRQDNPGLTVVGPESRQRLLKRLYAER------GVAERSRISNAISAHCSGIQVALT 603 Query: 206 GLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQR 265 +++++ + L + L A+ I + + N D ++ ++ + Sbjct: 604 E-ETKLYVDELVRLNALDLDAI------IPVCVQLMNA---------DESFKQRVQQAVQ 647 Query: 266 RHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDA 325 ++ + + L +G+P A +G G D Y E + Sbjct: 648 HLFVDEFQDLNRSQYDLVQLLAEQATVFAIGDPDQAIYGFRGGDLRYFFRFAEVPDTVLL 707 Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQRE 385 P + + I++ + I + D +I FH SP E Sbjct: 708 -----PLRTTYRLPRKIVQAAGSLICRNLICSGL--PLSAADNCPDGAIEFHRALSPGAE 760 Query: 386 VEVLHDRLLAMLE----------------EDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 E++ R+ ++ L+ D V+ A Sbjct: 761 AELIVRRIEELIGGVDSFSRSTGRSGNTPSPDNLSFADFAVLFRLGRQ-----AEELAEA 815 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 R +PY + L LL L+ + A + Sbjct: 816 LTRRGIPYQLVGATPFYMESKLRPLYQLLQAASGSDEIALWLS-----LFGALKGVGTTT 870 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L L + G + + ++ Sbjct: 871 LDRLESELPLRGDFFELAAEH--------------------------------------- 891 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 L L L+ ++ A + D Sbjct: 892 -----DHTPATGKALKLLATTLDRLQKSAADQGVAAALRISLPVFGLELDDAD------- 939 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 ++ G LS L Q A V + + + Sbjct: 940 --------RLLQMAEGFGTD----LSAFSHHLKQYASATVYD--PRAEAVALMSCHSSKG 985 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + F V+ + G+ +G++P L +++R LF L A+Q++ + Sbjct: 986 LEFPVIFMTGLEEGIFPCTLMGTP--------------NVEEERRLFYVGLTRAKQRVIL 1031 Query: 730 SYIGRSIQDNSERFP-SVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 + G S + EL + ESEA+++ Sbjct: 1032 TASGYRGWMGQGLRELSRFITELPAELVDKPEAGRQRRRAPVESEAQME 1080 >UniRef50_C8PVF1 Putative exoribodeoxynuclease V, gamma subunit n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PVF1_9GAMM Length = 1524 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 93/453 (20%), Positives = 165/453 (36%), Gaps = 128/453 (28%) Query: 1 MLRVYHSNRLDVLEALMEFIVERER-LDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAAN 59 ML + SN++D L + + FEP ++V S M +WL+ ++ K GI+ Sbjct: 1 MLTIIQSNKVDKLFDHLLNAYKNPSYQGSIFEPFQVIVPSKVMGEWLKKQVADKAGISTL 60 Query: 60 IDFPLPASFIWDMFVRVLP------------EIPKESAFNKQSMSWKLMTLL-------- 99 + + + RVL ++P+ + +K M W++ L Sbjct: 61 VTTEFWGRYFLGLMQRVLRTYARISEDDDILDVPEVAMLSKNVMQWQIFGYLTQYRQAIV 120 Query: 100 --------------------------------PQLLEREDFTLLRHYLTDD--------- 118 P +++ + + L++D Sbjct: 121 EQPQHPLYPFLSPLVEDKEADSPNTTGFAPDTPAIVDSLSWANNQSLLSNDVISQSADLQ 180 Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHL------------------------ 154 + ++++QL+S A++ ++Y+ YRP WL+ W Sbjct: 181 TQDQRIWQLASDMANMLNRYMTYRPQWLSNWGQDKPVAVSDMIAKKDALHNRLNGRDASN 240 Query: 155 --------VEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPP- 205 VE + +A Q LW+ L + R L+ +F + L + T Sbjct: 241 AIDTPDWLVEHYEQLEAAQRFLWRQLFDD------DYRFREQLHNQFWQALNHSDTRIRN 294 Query: 206 ----GLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLL 261 LP VF+ + LPP L LQ LG ++ +L NP +W DI D +L ++ Sbjct: 295 ISRSKLPKHVFLFTLQQLPPTELLDLQRLGVLTDVTILHFNPSEQFWADIVDKNWLMQM- 353 Query: 262 TRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ 321 E+ ++ +D G+ LL+ +GK R+ +L+ L ++ Sbjct: 354 -----------------QMEDDASKHDAWYLKDYGHTLLSRFGKQSREVFAMLASLSGNE 396 Query: 322 ELDA-----FVDVTPDNLLHNIQSDILELENRA 349 F + P+ LL IQ DIL LE A Sbjct: 397 YEHVLWQDDFDNTPPNTLLEFIQHDILMLEEVA 429 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 119/619 (19%), Positives = 227/619 (36%), Gaps = 85/619 (13%) Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP-------------- 401 + + K PLD+SI HVCHS R++EVL ++ L Sbjct: 501 NKQLENVEKWRPKPLDTSIAIHVCHSMVRQLEVLRSMIIGWLNYSDMQATPAQIPTDPWD 560 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSA-------PADRYLPYAISDRRARQSHPVLEAF 454 DI+V++ DI+++ I+A F + D + + Sbjct: 561 RRALSDILVLLPDIETHQNIIEATFPKHVGGDGYQLPAKVTGVVAKDINLLWQA--ITGY 618 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE- 513 +LL+ +RF +V L + L F + E + + ++G G D+ ++++ Sbjct: 619 YTLLNRAGARFQRSEVFDWLMLAPLYESFGLNLEQMTRACDLLTQAGFIRGFDELHLQQT 678 Query: 514 -LELPATGQHTWRFGLTRMLLGYAMESAQ-----------GEWQSVLPYDESSGLIAELV 561 ++T+ + L R++ G M A G + +P + A++V Sbjct: 679 LSAADDDYRYTFAYALERLVAGVMMPKATVVSFGEYTNSFGVVEKFVPLTNLTMADADIV 738 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 L + L+ R + L +WL ++ F +T A I + Sbjct: 739 AVLCDIYETLDDNRHLGNDVKTLPDWLTQIEKLIQQKFSLFNQTN-AWRAIFAAQNDLKE 797 Query: 622 EGLGAQ--------------------------YGDAVPLSLLRDELAQRLDQERISQRFL 655 + L+ + + +AQ + +++S Sbjct: 798 NIEANSKYLATVKIKTAKNPNPATEPVQQIDTENLPLKLTFVLENIAQSIINQQVSA-EP 856 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ-KPKRGDRSRRDDDRY 714 +G + + +RS+P+K+V +L +N +P+Q ++LM P RGDR R DDD Sbjct: 857 SGVITFARIGSVRSLPYKLVVMLNLNLSEFPKQEQQNRYNLMQAGLPIRGDRFREDDDLG 916 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDES-- 772 FL+AL+ A+Q +I Y G+S D E P+ VQEL+D++ ++ Sbjct: 917 AFLDALLCAKQACWIFYNGKSTTDTHEHLPASPVQELLDFLQNRMASDDVIIDPNNDQNS 976 Query: 773 ----------------EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 E VKA+L H +PFD ++ + + + Sbjct: 977 LSNNSQNPPNPQSTNFEQWVKAYLVTHHAALPFDKSYFELPQTEHKDKGIQSPEQINDDR 1036 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS 876 S +Q +L + + L + P + + + + + S P + + + L+ Sbjct: 1037 VSADLQQTTASLNQQIKLSKTALYP--PAKIWHNLYTALQDKEATSTQPIVQVWDTKQLT 1094 Query: 877 RYQINQQLLNALVEQDDAE 895 + Q L + + Sbjct: 1095 EWLSQWQQLKQRLSDMPEQ 1113 Score = 64.6 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 50/168 (29%), Gaps = 17/168 (10%) Query: 964 LLRWRPSLLSVAQGMQLWLEHLVYCASGGNGE---------SRLFLRKDGEWRFPPLAAE 1014 L + P+ +Q WL HL + S P + E Sbjct: 1356 WLNYLPTSGKEKYLLQFWLHHLCWQVLRRTTAQQAQLNDGFSLWQFSNKKTVYLPAIPCE 1415 Query: 1015 QALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQA 1074 QA YL ++ Y+ S ++ P A+ + Q ++ + +L+ Sbjct: 1416 QACGYLQDIVMVYQLIDSVVTILPP----AFCLSFLQKQ---QKQPEAPASQHLGDWLKD 1468 Query: 1075 YEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRF-LLPLFRFNQ 1121 N + + D +Q L P + + P+ + Sbjct: 1469 SNFNFVDVNQFDYPIWQHLIGDYKPSVVIGFAQTLGALIYEPMLSMVK 1516 >UniRef50_Q04GY7 ATP-dependent helicase/nuclease subunit A n=1 Tax=Oenococcus oeni PSU-1 RepID=ADDA_OENOB Length = 1186 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 84/882 (9%), Positives = 233/882 (26%), Gaps = 156/882 (17%) Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 AL K L F++ ++ + +++ ++ + ++ + + N Sbjct: 351 ALKKRELSLLDFSDGEQFAYQILQNQTVREEIQSLFDEVLVDEYQDINDLQENILTDVSN 410 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYL------LSDLESSQELDAFVDVTPDNLLHNIQSDI 342 VG+ + +G D + + + ++ + + + + + + Sbjct: 411 GSNFFMVGDLKQSIYGFRQADPVNFSNKYIQYKEGNGGELIELSENYRSQHNVADFTNAV 470 Query: 343 L---------------ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVE 387 ++E +A + + D + S +S Q ++E Sbjct: 471 FRKLMDRKLGGIDYRGDVELKAANRDYPKNLKNVADISIFDIDEESNEDEDFNSRQAQIE 530 Query: 388 VLHDRLLAMLEEDPTLT----------PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 ++ ++ A++ + RDI ++ + IQ +F ++P Sbjct: 531 IIAAKIQALVGQSEIYDRQSGKMRPLVYRDITILERSHS-WENDIQTIF----KKYHIPI 585 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 ++ + +S L + D+ ++A+L P+ Sbjct: 586 NVAAG-NFLQEFEVSIVLSFLKIIDNPHQDIPLVAVLRSPIYGLD--------------- 629 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 L + ++ S L +G Sbjct: 630 -------------------------------ENQLAEIRTADMKHDYFSALQAYAKTGQD 658 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 +L +A+ L+QL +R A + ++ + D ++ + Sbjct: 659 LDLQKKMAAFLVQLENYREIAADNQIVDLIWQIYNDTNWPEYVAGMVGGSQRQANLHALY 718 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQ-ERISQRFLAGPVNICTLMPMRSIPFKVVC 676 + + ++L ++ + V++ T+ + + F +V Sbjct: 719 QYAQQLSDNHFVGLFSFIRYVEQLMDSVEDFAQAPVDMGQEAVSVMTIHAAKGLEFPIVF 778 Query: 677 LLGMN----------------------DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRY 714 LL ++ D V+P + ++ ++ Sbjct: 779 LLNLDKQIDNRDSNGAMVVDFDNGIGIDFVHPTSQVKIPTIQKIAVAEKIKEKNWAEEMR 838 Query: 715 LFLEALISAQQKLYISYIGRSIQD-------------------NSERFPSVLVQELIDYI 755 L AL A+Q+LY+ + + D + R S + + Sbjct: 839 LLYVALTRAEQRLYLVGSSKRMSDLIHNWGTPVSIGKKVIAFQDRMRAKS-YQSWIGMSL 897 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 S Y+ D+ + + +P +N ++ + A Sbjct: 898 ANSGYIKLDKVEGNYSKKDLTFKIESYNAQTIPKIVENKAKIKQNEQEETGIDLARSKKI 957 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF-----QMRLQVNFRTEDSEIPDTEPF 870 + + L + L+R + P + Q+ E I + Sbjct: 958 LDYNYPYKIESELAAYHNVSELKRVFEDPDSLLMPEMNSDRQPQITELPEPKFIGGNDQE 1017 Query: 871 ILEGLSRYQINQQLLNAL-VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEM----- 924 + + +L + +++ + ++ I + Sbjct: 1018 QVSSTDKGTATHLILEKIDWKKEIDKDYLQQLIKENIPDQKTRQSIELDRIIWFANSEFG 1077 Query: 925 ---------QQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVA 975 + Q + + V + G + Sbjct: 1078 TEIKKSASTLKREQTFAMLIPAKQIYQQVETSDPVLVHGIIDGYFI-SDGLITLFDYKTD 1136 Query: 976 QGMQLWL---------EHLVYCASGGNGESRLFLRKDGEWRF 1008 + + ++ + +Y A+ + L + + Sbjct: 1137 RFGKDYVSKLKERYSGQLNLYAAALSSIYPNLKVERKVVVGL 1178 >UniRef50_Q027B7 DNA helicase/exodeoxyribonuclease V, subunit A n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027B7_SOLUE Length = 1045 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 79/753 (10%), Positives = 171/753 (22%), Gaps = 112/753 (14%) Query: 257 LAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSD 316 A+L + ++ + + ++ + D VG+ + +G + Sbjct: 325 RARLQRQFDHILMDEFQDTNGQQAKLIELIRPPDRFYAVGDINQSIFGFRHAEPQGFARY 384 Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN-------KRPLDP 369 + D L + + A + ++ +R D Sbjct: 385 RDEIATGDR--------HLVQLVDNFRSRAEILSAVETLTAGAKGIEDRALVAGRRFDDA 436 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + S+ E + + R++ + P +D V+V + + + F A Sbjct: 437 PEHSVEVIAAPETAIEAQWVARRIMEL--SGPEPQFKDFAVLVRNTE-----VIPEFTDA 489 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +PY ++ R + + LL + + +L P++ A + E Sbjct: 490 FDAAGIPYLVNRGRGFYASREVNDLTHLLRAIANPRDEISLAVVLRSPLVNA----SVEA 545 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L L+ G + L+ H WR + L Sbjct: 546 LLRLKMNGENLG--AALQRSEDALLQRFGARLHEWRGRREYVT------------FDRLL 591 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + G++ L Q ++ + + E V + P ++ A+ Sbjct: 592 LEAIDDCGYPASGNVDKFLAQARDAASRMSLDEFVMELAQVREENPREPDAPPEDSANAV 651 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 + + + + +D V Sbjct: 652 KI-----------MTVHSAKGLEFPVVFVAAIHKGVDT----------GVPAVAFSRHYG 690 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + + P + + ++ LF A+ A+Q+L + Sbjct: 691 LGARW---------RNPASGQDKDDLFQHALRREWKQREEEESNRLFYVAMTRAEQRLIL 741 Query: 730 SYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 S+ + R P L + + + Sbjct: 742 SFTA------AARKP-----------QNWDKLVMERLRIEPGTPGDAVKIFEAPDGKQWK 784 Query: 790 DPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 + RE P + + + L F P + + Sbjct: 785 ARILIAQAAPELLTRERTPNEEITVQFA--VPPVVEEQHDSNATVTALALFAGCPRKYYL 842 Query: 850 QMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPY 909 L R +E L+ LL R P Sbjct: 843 NRYLGFEGR----AARRSEGAALDAGEFGTQVHALLAGTAVASPDPEAVRLAEVFRQSPL 898 Query: 910 GAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRP 969 G E + + LA I G + + Sbjct: 899 GRRAENAVRIER------------------EFDFLLAIADQVIVGQVDLWFEE-NGELLV 939 Query: 970 SLLSVAQGMQLWLEHLVYCASGGNGESRLFLRK 1002 H L + + Sbjct: 940 VDYKTDTVSASEASHRARDYGLQLRLYALAIER 972 >UniRef50_A7BEI4 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BEI4_9ACTO Length = 1142 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 99/910 (10%), Positives = 205/910 (22%), Gaps = 173/910 (19%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIY 312 PA L R ++ + + LF VG+P A +G G Sbjct: 251 APAVRESLREEFRAVLLDEFQDTSVIQMDMLSMLFGDHAVTAVGDPNQAIYGWRGASASS 310 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSD--ILELENRAVAGVN----------IEEFSR 360 L S L+ Q +A + L ++D IL+ NR A + + Sbjct: 311 LESFLDRFQTGEA-QESQTLTLSTAWRNDEAILDAANRVAAPLREVAAYQEGKEHLKAQS 369 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA-MLEEDPTLTPRDIIVMVADIDSYS 419 + + + + D + R + V+ ++ Sbjct: 370 PVLVARDGAGPGHVDVAYAPDYEAALGAVVDFARSVRSHASEGGKRRTVAVLCRRRKDFA 429 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 +A D +P I P ++ + L L S + LL Sbjct: 430 -----YVDAALRDAGIPTEIVGLGGLLDQPAVQDVRAALELAYDVEASPWLARLLV---- 480 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 D+ L L W G + +++ Sbjct: 481 --GIDLGATDLMALGDWSRVLARTEGTNPHQ-----------------------AVLLDA 515 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 + + + E V + L +L R G+ + + + Sbjct: 516 VDSPPEPGWAAEGRPAISEEAVRRVRLLGERLRQVREGVGRSVTEQVERAILIMGTLDDV 575 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ-RFLAGP 658 + D + +++ A +R D Sbjct: 576 IADPLSMGGRAALDEFIAVTAAYEKDTPGASLGSFLAYLRMADEREDGLEAPLGEPDPRA 635 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ---------------KPKR 703 V I T+ + + + V + G++DG++P + + P R Sbjct: 636 VQIMTVHASKGLEWDCVVVFGLSDGIFPSHDKRKTVSWLDEPPIATAWLTDAGALPHPLR 695 Query: 704 GDRSRR----------------------------------DDDRYLFLEALISAQQKLYI 729 GDR+ ++R L A+ A+ + Sbjct: 696 GDRADLPPFLLDVEGESKPSAAYSKWVKGHYGRSLGVHAEREERRLAYVAMTRARSIQLL 755 Query: 730 SYIGRSIQDNSERFPSVLVQELIDYI----------------GQSHYLPGDEALNCDESE 773 ++ R PS + E + + + GD ES Sbjct: 756 VGSWIYRTGSTTRQPSRYLMEARAQLFGDAPDLVDDTLVRVGDRGVWARGDWRSLGIESV 815 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP 833 + L + + E P+ + A + + Sbjct: 816 SGAGVCLIAPEPGDEDIVDSGAGAASVFFPEEPGPSRQRVAAAAQAVEAQIRDLAQDQDV 875 Query: 834 LETLQRFWAHPV-----RAFFQMRLQVNFRTEDSEIPDTEPFILEGL------------- 875 E L + P+ + L + D + L Sbjct: 876 YEALAQLGDDPLVRDTVALIEEYHLGLETPVVDLWAERVPATSVSALLQDADEFARDMRR 935 Query: 876 ----------SRYQINQQLLNALVEQDDAERLFRR--------------FRAAGDLPYGA 911 + + + + A+ Sbjct: 936 PMPARPSSFSALGTVFHAWVERELHLASADPASEITTGNEVSAGEDATLAGGDDAADEAL 995 Query: 912 FGEIFWETQCQEMQQL----ADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLR- 966 + E + A+ + R + GV + G + V Sbjct: 996 LTDGERERLERLRANFRAFVANELSDYRAVAIEEAFSVQVGGVSVQGRIDAVFERVRGDG 1055 Query: 967 --WRPSLLSVAQGMQLW----------LEHLVYCASGGNGESRLFLRKDGEWRFPPLAAE 1014 + + + + +Y + + F + Sbjct: 1056 PRYLVVDWKSGRPVSAATKPDKVAYFVTQLRLYQRAWAARMGVDASKVGAMVAFLAGPSH 1115 Query: 1015 QALHYLSQLI 1024 L L ++ Sbjct: 1116 HTLESLEAML 1125 >UniRef50_A6GBC2 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GBC2_9DELT Length = 683 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 57/513 (11%), Positives = 130/513 (25%), Gaps = 67/513 (13%) Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWG 304 D K + +L + ++ + ++ VG+ + + Sbjct: 216 ELLRDPKHASVAEQLRGQWDHMLVDEYQDINVLQGAIIDEMARDHGSLTCVGDDAQSIYS 275 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK 364 G D+ + +E P + + IL L NR++A + Sbjct: 276 FRGADFSQIYDFRIRHKEAQVL----PLTINYRSTPQILSLANRSIARNREQH---PKEL 328 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 + ++ ++ E++ R+L + + +L R + V+ + Sbjct: 329 TAVRKPGATPALIPLRDVIQQGELVAQRVLELHH-EQSLPLRKMAVLYRNHAH-----SL 382 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 R +P+A+ ++ ++ L ++ + L LL Sbjct: 383 ELQVELTRRNIPFAVRSGVRFFEQRHIKDVVAYLRARENPRDALAWLRLL-----RLWPG 437 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 I + + +G P + A+ + + Sbjct: 438 IGNRTAERVASVLAGEFDAFGRRLPVPAGPPAPVPEVLAAESKQAKGRAKDALVTLAKLF 497 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 +L P + + + E Sbjct: 498 DRLLE----------------------------AGGRNPGRAIEIIVHEHYADYAERSFE 529 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTL 664 A LS + + + + + T+ Sbjct: 530 NADARKEDLDNLANYAGRWE----DATEFLSE-LALIEGISAENVVMGDEPDDKLVLSTI 584 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 + + + VV +L + DG +P + +++R LF A A+ Sbjct: 585 HQAKGLEWPVVFVLWLVDGRFPSS------------QALRANAELEEERRLFYVATTRAE 632 Query: 725 QKLYISYIGRSIQDNSE---RFPSVLVQELIDY 754 LY+ Y PS + EL Sbjct: 633 DDLYLLYPTIEEGRRGPTTVLRPSRFLTELDHD 665 >UniRef50_Q2FNI4 UvrD/REP helicase n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FNI4_METHJ Length = 1149 Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats. Identities = 107/964 (11%), Positives = 219/964 (22%), Gaps = 157/964 (16%) Query: 152 GHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPS-R 210 + E A + + Q W +L + +P Sbjct: 250 DLTPDAPPETLHKAAEEFLKIRPTGKLGSQKIWDNDDLIRFREAKTCLIENLEKAVPFFS 309 Query: 211 VFICGISALPPVYLQALQALGKHIEIH--LLFTNPCRYYWGDIKDPAYLAKL-------- 260 ++I S + + L + LL + D D L + Sbjct: 310 LYIDKDSRFTASTITFFRDLALVAGYYFDLLHMLKRQANGVDFNDLIQLTREFLQSHQDI 369 Query: 261 -----LTRQRRHSFEDRELPLFRDSENAGQLFNS-----DGEQDVGNPLLASWGKLGRDY 310 R + ++ + E + VG+P + + D Sbjct: 370 VARHIRPRYQYILVDEFQDTDPAQFEIITAIIGELQPGTRSLFIVGDPKQSIYLFRNADV 429 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD-- 368 L N+ + + + ++P + Sbjct: 430 TRFKEAQTRILS-------DCKGNLINLDTSFRSCREVIGCVNYLFSRIFASTEKPWEFG 482 Query: 369 -----------PLDSSITFH----------VCHSPQREVEVLHDRLLAMLEED------- 400 SIT + + E ++ D + ++ Sbjct: 483 YEPIQVCDDRKASPGSITVLLPGKAPKGSERSETKEIEAGMVADLVHQIVSCGSFQITDR 542 Query: 401 ----PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 DI +++ + + +A + + P+ + S + + Sbjct: 543 DGVMRPAGYGDIAILIERRTHLTRY-----TTALSRKETPFYVHGGIGFYSRQEIYDIYN 597 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 +LS + S + +L P + + L Y V + RW + + E Sbjct: 598 ILSFLLRPYDSAALFGVLRSPYFSFS-----DPLIYHILNVPGAKRRWSLYEKLRACAER 652 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 T + P E + L WR Sbjct: 653 FCTRP-----------------------SEIEPSAEILSCSPADQELILRAARLLESWRN 689 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 +E + + R+ E ++ G G L Sbjct: 690 LAGREPVVPLVNRIIRESGILTIYGALEQGEQQA---ANLTKLLGIIRGRTEGGYYSLFD 746 Query: 637 LRDELAQRLDQERISQRFLAG-----PVNICTLMPMRSIPFKVVCLLGMND--------- 682 L ++ + E VNI T+ + + F VV L M Sbjct: 747 LVQDMMISIADEEREGEAALDTLSKTSVNIMTVHAAKGLEFPVVILPDMGSSREGKLGPI 806 Query: 683 --GVYPRQLAPLGFDLMSQKPKRGDR-----------SRRDDDRYLFLEALISAQQKLYI 729 G +P D + + + LF A+ L + Sbjct: 807 LSGDHPHLYGVRIPDPDQDFDIKETPVYTALSLIQKEKESAERKRLFYVGATRARDHLVL 866 Query: 730 SYIGRSIQD---NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 + V L G +++ ++ + +T L Sbjct: 867 CGKQPDKFYESVDKSNNRIDWVCTLFGITKDIAEEGGVISIDPEDGGKPI--DITILTDP 924 Query: 787 MPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVR 846 Q + S K P VP+ + Sbjct: 925 DQLTRMWAQEALPPLTLPDEYAKLSGTRKRGLYSDMPDEKATIRPVPVTDIGLLGK--AT 982 Query: 847 AFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGD 906 + QV +PD + + D + + + Sbjct: 983 GHEETIHQVTIPGGSHLLPD---------EIGTLLHHIF----SGKDTKSVLVSYGITSP 1029 Query: 907 LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLR 966 ++ + + + Q + +TG + ++ D Sbjct: 1030 EAESFCNTLYQRFCSTPL------IRDAVRSFQEVSFITYSGNFPVTGRIDRLIQDSRNE 1083 Query: 967 WRPSLLSVAQGMQLWLEHLVYCAS-----GGNGESRLFLRKDGEWRFP-PLAAEQALHYL 1020 W L+ VY + G L+ K GE+ P L+ E+ L Sbjct: 1084 WAVIDYKSGDKTGAELQLNVYRIAAEVLTGQPVRMFLYSMKTGEFTEPRFLSDEEIHVAL 1143 Query: 1021 SQLI 1024 + + Sbjct: 1144 KRYL 1147 >UniRef50_UPI0001C37CA1 ATP-dependent nuclease subunit B n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37CA1 Length = 1112 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 123/1087 (11%), Positives = 287/1087 (26%), Gaps = 197/1087 (18%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQW---LQMTL-SQKFGI 56 M+ LM + + P+ I+V + L L ++KF Sbjct: 1 MVEFITGQAGSGKTTLMFEKIRNDS-----RPKCIIVPEQFSHDFDKKLYYFLGAEKFNE 55 Query: 57 AANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWK-LMTLLPQLLEREDFTLLRH-- 113 ++ F A ++ ++ + + + + + + + Sbjct: 56 LFSLTFTSLARQLFQLY----GDPSRSGDYADEMAKMILIYQAVNNIQSMPGGLNFFRSG 111 Query: 114 YLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALV 173 + D KL + A L + L+ R + L + A ++ Sbjct: 112 HSGFAEDVLKLIGEMKR-AGLTPEALMERSQMF--------GDRLRFKTSDIAMIYMEYQ 162 Query: 174 EYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKH 233 ++ G I L+ V++ + + Sbjct: 163 RLMNEYGFKDSIENIKVAAEIAELQGYFR-----GRSVYLDEFESFTA------DQIAML 211 Query: 234 IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ 293 + N C D T + + Sbjct: 212 RVMISSAENVCIALRTDDVTAGRFTLFETVNKTYE------------------------- 246 Query: 294 DVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 D + ++ + +L + +A + Sbjct: 247 ---------------DIKSICTEF------------RKETVLTECSESYRFISP-DIAYL 278 Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA 413 + P +I EVE + + ++ L R+I V+ Sbjct: 279 SSHVLRNKKYSPEEAPKPDNIKIFEARDMYSEVEYVSASIKRLIHSRKDLRYRNIAVISN 338 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR-FVSEDVLA 472 DI +Y+ I+A F +PY +S + V+ F SL+ L SR F SE + Sbjct: 339 DITAYAGIIKAAF----KRYDIPYFLSVEKPVTHTAVMVYFTSLIDLLCSRKFRSELIFR 394 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 +L + D++ + L + +W +D + + + + Sbjct: 395 MLKSGLT----DVSLTDISALENYC----YKWTVDSEIWESEFTAPDDALDSLEAIRKTV 446 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 + + + + E+ + + Sbjct: 447 IEPVFALRKKL---------------SKKCTAKKICTLIYEHLVSGGIEKNVGRMMSGLI 491 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 + A+ A + + I+ + + S + + + S Sbjct: 492 NSDRAY------EAAEIKRLWGCLIDILDSICETLDENEMSFSEAAKLMKSMIGRINYSV 545 Query: 653 RFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR-- 709 V + R K V ++G NDG +P Q+ G + K ++ Sbjct: 546 PPQTLDAVMTASARTARLNAPKAVFIMGANDGDFPNQVTVHGLFSEPDRQKLAEKDLLVS 605 Query: 710 -------DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 +R + +++ + +KL+ISY ++P+ ++ +I G Sbjct: 606 TPLADLIAAERLVVYKSVSAPSEKLFISYPLSD-LSGQTKYPAQIIDSIIKMFGTDRIRL 664 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP----------AASQ 812 ++ + A + + + + E+ +R Q Sbjct: 665 TEDDIPVHYYAATLHSAFYHYMQNRESNTPSAAAVEQLLMSRPDYKRRLIYVLSRSGHEQ 724 Query: 813 AGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL 872 SE ++ L P + L+ + + F L ++ R + L Sbjct: 725 EYLIESEIMENLKSFSPLRLSSTGLEEYDLCHFKFFCDKCLGLHPREKIE---------L 775 Query: 873 EGLSRYQINQQLL-----------------NALVEQDDA-ERLFRRFRAAGDLPYGAFGE 914 + ++ + + E+ +R + AGD A Sbjct: 776 DARIAGELTHECFFGLLSSRSKQEFISMSYEDMREEIGRKAEEYRNNKLAGDFGKDAKFG 835 Query: 915 IFWETQCQEMQQL----ADRVIACRQPGQSMEIDLA---------CNGVQIT-----GWL 956 + + + ++ ++A E+DL NG Q++ Sbjct: 836 LIFSKLTDRLSEVFIHTQQSLMASDFVPHKFELDLRESHSVVLPFGNGKQLSFGGIVDRA 895 Query: 957 PQVQPDGLLRWRPSLLSVAQGMQLW--------LEHLVYCASGGNGESRLFLRKDGEWRF 1008 + +G R ++ ++ L+Y + + + + Sbjct: 896 DICKINGRDYVRIVDYKSSRKNITAETLGCGINMQMLLYLFASADKGGIYEGCEPAGVLY 955 Query: 1009 PPLAAEQ 1015 P+ + Sbjct: 956 SPVQVSE 962 >UniRef50_B1HN90 ATP-dependent helicase/nuclease subunit A n=2 Tax=Bacillaceae RepID=ADDA_LYSSC Length = 1238 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 72/857 (8%), Positives = 200/857 (23%), Gaps = 168/857 (19%) Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG----EQDVGNPLLA 301 G+++ L R + ++ + + + + VG+ + Sbjct: 392 EVDGELQPSPVALDLKKRFKEVLVDEYQDTNMLQETILQLVKSGEEQDGNLFMVGDVKQS 451 Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE----- 356 + + + E + ++ ++ + I Sbjct: 452 IYRFRLAEPKLFMRKYSEFLET-----PDATGMRIDLNANFRSRKEVLNVTNYIFAQIMG 506 Query: 357 ---------EFSRSDNKRPLDPLDSSITFHVCHSPQRE---------------------- 385 + + P D + + V H PQ E Sbjct: 507 ERVGEILYDDNASLKPAAPYDEKEVPVELVVMHPPQDEETVDEQEDKTDEASELEELKKS 566 Query: 386 ---VEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 + DR+ M+E+ L DI++++ + + + Sbjct: 567 QYEARFIIDRIRQMMEDGTTVYDTKSMTERPLKYSDIVILMRSMTWSTDLV-----EEFK 621 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +P + + +++L + D+ + + ++L P + TE L Sbjct: 622 LAGIPLYAESSKGYFDALEVMIILNVLKVVDNPYQDIPLASVLRAPFVGL----TENELA 677 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 + A + + L + + Sbjct: 678 KI----------------------RLADSKVPFYDALRQFIRS----------------- 698 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 E G+ L ++ WR + + + D + Sbjct: 699 EGQGVQTTTFEKLQRFMLAFENWRDLARRGSLSDLIWKIYLDTHYYEMVGAMPNGKQRQA 758 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRS 669 + + D + R D S V + T+ + Sbjct: 759 NLRILHDRALMYEQTAFRGLFRFLRFIDRMRTRGDDLGTAKSIGEKDDVVRLVTIHSSKG 818 Query: 670 IPFKVVCLLGMN----------------------DGVYPRQLAPLGFDLMSQKPKRGDRS 707 + + VV + GM + P ++ + Sbjct: 819 LEYPVVFVAGMGRPFNKMDFHHPYLFDQDFGLAVKAIDPENRITYTSLPFLALKEKKELE 878 Query: 708 RRDDDRYLFLEALISAQQKLYISYI------GRSIQDNSERFPS-------------VLV 748 R ++ + A+ A+++L + R +++ PS + Sbjct: 879 MRAEEMRVLYVAMTRAKERLILVGSVKNWEKTRDNWQDAQNIPSDAPLQEYLRARANSYL 938 Query: 749 QELIDYIGQSHYLPGDEALNCDESEAR---VKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 + + + + E ++ + H N + + + + Sbjct: 939 DWIGPAVARHGDFASQATTSYKELDSPSHWWIQPIDTRHYSYDIQAFNDEIQQHLTTQED 998 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVR----AFFQMRLQVNFRTED 861 + + H+++ + ++R + +F + + Sbjct: 999 EALLSEIKARFHAQYTYQKSTRKRSKTSVSEIKRLENLQRQEEPEYYFATPAKRTSTSIA 1058 Query: 862 SEIPDTEPFILEGLSRYQINQQLLNA-----LVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 + L G ++ + + A L + Sbjct: 1059 PRPTFLQDQQLTGTEIGTAVHTVMQHIPQFGFDTIEAVKGFVANLVAKQLLTEAEGKVVP 1118 Query: 917 WETQCQEMQ-QLADRVIACRQPGQSMEIDL-----ACNGVQITGWLPQVQPDGLLRWRPS 970 + ++ R RQ + M + + + G + + D W Sbjct: 1119 IKKVYHFFHTEIGQRFKQARQIRREMPFTISRVDEDGDAQIVQGIIDCLFEDEYGNWVLL 1178 Query: 971 LLSVAQGMQLWLEHLVY 987 + + + + Sbjct: 1179 DYKTDRILPHFAKEPAL 1195 >UniRef50_B9EAN7 ATP-dependent nuclease subunit B n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EAN7_MACCJ Length = 1118 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 74/702 (10%), Positives = 170/702 (24%), Gaps = 70/702 (9%) Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + S ++ I S E + +++ ++ + +DI+V+ Sbjct: 272 NDELNMLENSFSREVSISHTEHIHLSQHASVPAEAAHIAHKIMDLVRKGE--RFKDIVVL 329 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 D I +PY + H +E SLL + E + Sbjct: 330 YRDESYVKQLI-----DVCRKHQIPYHTDYKELMIHHKAIELIRSLLDAFKTNMRMEHLF 384 Query: 472 ALLDVPVLAARFDITEEGL--RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 L ++A F E+ L L + E G+ + + ++ Sbjct: 385 RALKTGLIAHEFKREEDLLLIDMLENVMIERGMYYDDLIHKRKLFYDEKDVYEQDQWDAL 444 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 + Y + + + ++ + + + ++ L + Sbjct: 445 LQYIDYLLSVIEPFKERIVNA-----------QSGRAFASAIYSFMLSISLPEYLMQHKD 493 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 + +D + + I ++ + + + ++ D + Sbjct: 494 MAKDNGEQYIALTFDQ------ILTGLNQVLDDFVLIMDEVTLDYKVMCDIIDVGFLALE 547 Query: 650 ISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP------- 701 + + I L + K V + G+ND + PR + +K Sbjct: 548 YNAPPQGLDQIQILNLDLAKVENKKYVFVCGVNDDILPRPMKEDALITDQEKRMMQEIGD 607 Query: 702 ---KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG-Q 757 D+ ++F A+ AQ +YISY ++ PS + L + + Sbjct: 608 IQLAPTTDVLIQDEWFVFYNAVTHAQHSVYISYSLMNMNQ-EAMRPSRYLARLERQLHLE 666 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH 817 + D + H E ++ Sbjct: 667 VQDMTLDMNPEDCITTYHAGIKHAVSHIEDDTWSDVVAVYETDPQFEHVFKLRHYRNQSE 726 Query: 818 SEFVQPLPFTLPETVP--LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP-DTEPFILEG 874 + +T+ + + F + F L++ R + Sbjct: 727 MLAEHEVSRLYGDTIKASVSRFETFNQCAFKHFANHGLRLKERLPYQFQSFQLGNIFHDA 786 Query: 875 LSRYQ--INQQLLN---ALVEQDDAERLFR------RFRAAGDLPYGAFGEIFWETQCQE 923 L Q+L A++ + + L Y + Sbjct: 787 LRHLSEKFKDQVLQVDAAVIASEIDDYLKASLPSVHYEVLYSKHYYQYIVKQIRTILLST 846 Query: 924 MQQLADRVIACRQPGQSMEIDLACNG--------------VQITG---WLPQVQPDGLLR 966 + + E G ++ITG + + Sbjct: 847 FTAIQRQTKYSNFKMARFETKFGKGGALDTQIYRFGKNKKIEITGQIDRIDILPSPEKDY 906 Query: 967 WRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRF 1008 R Q + + L Sbjct: 907 VRIIDYKSRQTDLDLKQVYYGLQMQMLTYMDVVLSNTARLGL 948 Score = 87.7 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 35/240 (14%), Positives = 66/240 (27%), Gaps = 41/240 (17%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGI--AANIDFPLP 65 + + ++ ++ + L DP +++ Q ++ LS I + Sbjct: 13 GKTHEIIERIKSQLKGQPLGDPI---IMIAPRQSTFQ-IEQALSHDAMIKGSMRTAIYSF 68 Query: 66 ASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF 125 W + T L + L L + D+ K F Sbjct: 69 DRLFWRLESEEGS------------------TKLQHISNSGVEMLTYQILNEHKDELKRF 110 Query: 126 Q-------LSSKAADLFDQ---YLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEY 175 Q S K A + + Y V D V + ++ AL E Sbjct: 111 QSTSAYFGFSQKMAAVISELKKYNVTPSDVYTLLGKEMDV-RTKDKLHDIYEVYTALEEK 169 Query: 176 THQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIE 235 + IET ++ ++I G V +Q+L +H + Sbjct: 170 MSGQYMQTEDMLVALCKMIETSKTIRNAD------IYIDGFYNFTTVEYMVIQSLAQHAK 223 >UniRef50_Q8ERW5 ATP-dependent helicase/nuclease subunit A n=1 Tax=Oceanobacillus iheyensis RepID=ADDA_OCEIH Length = 1243 Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 100/1110 (9%), Positives = 269/1110 (24%), Gaps = 226/1110 (20%) Query: 5 YHSNRLDVLEALMEFIVERERLDDPFEPEMI--LVQSTGM-AQWLQMTLSQKFGIAANID 61 + S+R D + + + P+ + + LVQ+ + +W + L N+ Sbjct: 164 FTSDRSDAEMEELIRSLHTFAMQSPWPNQWLDKLVQTYNIPEEWTEEELP-----WMNVL 218 Query: 62 FPLPASFIWDMFVRV-LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSD 120 + + + + + + A + + + E YL Sbjct: 219 RDEVSRQLDAVSQEIDIAYSITQEADGPYHYAKTIEEEKAIIQEALKNMESWKYLQQSML 278 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 + K +LS K D D + + L + + +W Sbjct: 279 QVKFGKLSGKKVDC---------DEEKKTKVKKLRDSYKKRFQKMQEVW--FARNLDAHV 327 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 A + + +E ++ + + S L LQ L Sbjct: 328 YDMRVLAPVIKHLVELVKQFQDSFAKVKKEKAVVDFSDLEHYCLQILIDESSTE------ 381 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS---ENAGQLFNSDGEQDVGN 297 ++ +L + ++ + + S VG+ Sbjct: 382 --------EEVIPSTVAMQLQRQFTEVLVDEYQDTNMVQETILQLISDRQGSGNMFMVGD 433 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 + + + + F + ++ ++ + EN + I Sbjct: 434 VKQSIYRFRHAEPSLFIDKY------KRFSNSDDPSIRIDLARNFRSRENVLLGANYIFR 487 Query: 358 FSRSDNKRPLDPLDSSITFH---------------------------VCHSPQR------ 384 ++ + D++ + + + Sbjct: 488 QLFDEDLGEISYDDAAELIYGNKMYDDHPLEAKPELLLIDNNSEDVEQSDNEETVEDLEK 547 Query: 385 ---EVEVLHDRLLAMLE----------------EDPTLTPRDIIVMVADIDSYSPFIQAV 425 E ++ + + L +DI++++ + + Sbjct: 548 AQIEARAYAKQIKNWIGTPEDEIPMQVVDKATGKQRDLQYKDIVILMRSMTW-----AST 602 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 + +P ++ +S L + D+ + ++L P++ Sbjct: 603 IADELQQQGIPTYADLSTGYFEAIEIKVMLSFLKVIDNPRQDIPLASILRSPIIGL---- 658 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 ++ + ++ Sbjct: 659 -----------------------------------------EEDQLASIRLADRKASFYE 677 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 +V Y ++ ++ V L + LN +R+ Q E + R+ F+ Sbjct: 678 AVQRYLQNEQDNSDTVKSLIRFMEMLNDFRQSARQGSLSELIWDIYRETGYYDFVGAIPG 737 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ--RFLAGPVNICT 663 + + + + +R ++ V I T Sbjct: 738 GKQRQANLRALYDRARGYESTSFRGLYRFLRFIERMEERGKDLGAARALSEQEDVVRIMT 797 Query: 664 LMPMRSIPFKVVCLLGMNDG----------------------VYPRQLAPLGFDLMSQKP 701 + + + F +V L GMN + P + Sbjct: 798 IHKSKGLEFPIVILGGMNKEFNQRDLSEKYLLHKDLGFASKYIDPVKRIQYPTLYYHAVR 857 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF------PSVLVQELIDYI 755 + R ++ + AL A++KL + SI+ E++ PS ++ Sbjct: 858 QAKFRDMLSEEIRVLYVALTRAKEKLLMVGTVPSIEKKLEKWQRIVDHPSWVLPAYFRME 917 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 +++ AL +++ + ++A +++ + Sbjct: 918 SKTYLDWVGPALLRHVGSEKIRTENIGNQVLESINQDPSDWQITMNHALDYMDMKDSSMD 977 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF-------------------QMRLQVN 856 + + E L+ + + Q ++ + Sbjct: 978 NDDNLKEKVFNWESVETEQEGLKNDVDARLSYEYAYKQATVFRAKQSVTELKRQQEVKDD 1037 Query: 857 FRTEDSEIPDTEP-----------FILEGLSRYQINQQLLNAL-----VEQDDAERLFRR 900 + + P P L + ++ L + + + E + Sbjct: 1038 YSDQQILPPSHGPIGKRPNFLQKKLKLSPAEKGTALHTVMQHLPMTHVLSEPEIEENIEK 1097 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQ-QLADRVIACRQPGQSMEIDLAC------------ 947 L I + ++A ++I+ + + + Sbjct: 1098 MVLEEKLTRMEADSINIRAVERFFHTEIASKIISGNDMHREVPFSIMLPASEVYANWKDQ 1157 Query: 948 --NGVQITGWLPQVQPDGLLRWRPSLLSVA 975 V I G + + W Sbjct: 1158 SNEKVLIQGVIDCLLQADTG-WIILDYKTD 1186 >UniRef50_P12954 ATP-dependent DNA helicase SRS2 n=7 Tax=Saccharomyces cerevisiae RepID=SRS2_YEAST Length = 1174 Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 79/661 (11%), Positives = 175/661 (26%), Gaps = 62/661 (9%) Query: 129 SKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRAN 188 DL + + + + + + + + + + + + W Sbjct: 111 GHLVDLQKDWRIIDEKEIDVILDDMIEKVPDQIRDYASSITRKVNLCMPSKNGDEW---T 167 Query: 189 LYQRFIETLESATTCPPGLPSRVFICGISALPPVY-LQALQALGKHIEIHLLFTNPCRYY 247 ++ + I+ S LP + Y Q Q + + + L + Y Sbjct: 168 IHPKLIKKQISKLKSNAILPEEYILDSNHDAALGYFYQIYQ--SELSKKNTLDFDDLLMY 225 Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE-----QDVGNPLLAS 302 + ++L+ + ++ + + + VG+P + Sbjct: 226 TFRLLT---RVRVLSNIKHVLVDEFQDTNGIQLDLMFLFAKGNHHLSRGMTIVGDPDQSI 282 Query: 303 WGKLGRDYIYLLSDLE----SSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 + L + + IL + N Sbjct: 283 YAFRNALAHNFLEMGRKCPIEYSTIILVENYRSSQK-------ILNTSEILITQQNKGRQ 335 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 +R+ + D + + + E L LL + T D ++V Sbjct: 336 NRAPLRAQFDLDFPPV-YMNFPAYFLEAPSLVRELLYLKALPNLFTFNDFAILVRQRRQI 394 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 SA + +PY I + A ++LL L S +LA L P Sbjct: 395 -----KRIESALIEHRIPYKIIRGHSFWDSKETRAMLNLLKLIFSPNDKHAILASLLYPA 449 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGI-DDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 E+ L + + D + + + T + M+ + Sbjct: 450 RGLGPATGEKIKNALDTLATDVSCFQILKDISSKKIMLDIPTKGRSVIADFISMIENCQL 509 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + + ++ L + + ++ L + N Sbjct: 510 LLQSTLLGGLSDLFDKLYELSGLKYEYLYKDGKKKNDQLEKSEPNLLNARHKNIELLKNY 569 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG---DAVPLSLLRDELAQRLDQERIS--- 651 F +++E++ + +A E + L + L+ D Sbjct: 570 FLALLSKSESSDKEKNEAIKAATDEAEPIENKVITPKEYLRNFFNSLSLHSDAAEEEESE 629 Query: 652 -------QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK---- 700 +R G V I T+ + + + VV + G +G+ P D + Sbjct: 630 SNKDAKIKREKNGFVTISTIHGAKGLEWPVVFIPGCEEGIIPCVFNDDKKDESEEDEEED 689 Query: 701 -------------PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 D++R +F A A+ LY+S + R S Sbjct: 690 QENSKKDASPKKTRVLSVEDSIDEERRMFFVAQTRAKYLLYLSNTVTVEDVDRPRIASRF 749 Query: 748 V 748 + Sbjct: 750 L 750 >UniRef50_C5DG97 KLTH0D03498p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DG97_LACTC Length = 1090 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 80/761 (10%), Positives = 175/761 (22%), Gaps = 84/761 (11%) Query: 149 WETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLES--ATTCPPG 206 W+ G + + + P+ LVE + H + P Sbjct: 105 WKIGLPKDWRTFSDSDTDPIIHKLVEKVPDQIRDYAHSYTRKANLLRPNSKGNWEVHPAS 164 Query: 207 LPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYL--------- 257 + + + +A +H C + D L Sbjct: 165 VKKMISWLKSEGVMADEYRANNE-HDPALLHFYEAYQCELHSQHALDFDDLLLHAFKLLS 223 Query: 258 -AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-----EQDVGNPLLASWGKLGRDYI 311 + L + ++ + + VG+P + + Sbjct: 224 KERCLPHIKHVLVDEFQDTNSIQLNLMYLFARGNSTTSQGITAVGDPDQSIYAFRNALAS 283 Query: 312 YLLSDLE----SSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 + + IL + R K Sbjct: 284 NFEDMAAKCPIPCSRIVLVENYRSSQK-------ILTTSEMLIKQQLSGREDRLPLKAQF 336 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 D + + E L +L + ++V P Sbjct: 337 DSDFPPVYI-EFPAKFLEARALAREILYLRSLPKLWNYNSFALLVRHRRQIRP-----LE 390 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 ++ + +PY I + RA + + LL S + +L L P + Sbjct: 391 TSLIEHRIPYKIVNGRAFWELKEINGLMDLLKCVYSNYEKNAILRALQYP----NRGLGP 446 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 +R + + + + V A + L + E + Sbjct: 447 ATVRKVEATFADYESPFVALKNIVANPNNGAYASKALNVITEFLSLIESCRELMAEATDL 506 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW------LPVCRDMLNAFFLP 601 E + E G L + + + + R L F Sbjct: 507 SAMTEIFDKLYEGSGLKFEYLHVDGKRKAEVDPNGEPNLLNKRHINVNILRKHLANFKPF 566 Query: 602 DAETEAAMTLIEQQWQAIIAEG-LGAQYGDAVPLSLLRDELAQRL-------------DQ 647 + + + + + + + L + + ++ Sbjct: 567 EEDLSQRQGPGDDEVDVKEEDTDVEGKINAHDILREFINSVNLYSTETEVEESQMSEKER 626 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP--------------------- 686 + +R G V I T+ + + + VV + G +GV P Sbjct: 627 RQKKKREKDGFVTISTIHGAKGLEWPVVMIPGCVEGVIPCVFGGKDDADDSDSATDGGEE 686 Query: 687 -RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN--SERF 743 G + R + D++R +F A A+ LY++ + ++ Sbjct: 687 GNNRGNNGTSSPKKNRPRRNEGTLDEERRMFFVAQTRAKFLLYLTATNSNDTESRYESST 746 Query: 744 PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA 803 PS + + + + + + D + + Sbjct: 747 PSRFLTTDLVNTMCEDQKVFTDVESVRKLYHNLNQPPPQESATFSLDVLVKDYEQFVNAR 806 Query: 804 REWLPAA-SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAH 843 RE L A + P + T + Sbjct: 807 RERLTWKGRAVFDASRLNLGENITPSPTGFGITTAAAQLRN 847 >UniRef50_Q5WF16 UvrD/REP family ATP-dependent DNA helicase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WF16_BACSK Length = 763 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 56/502 (11%), Positives = 131/502 (26%), Gaps = 84/502 (16%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 + L + R ++ + E L VG+ + + G D Sbjct: 339 NNRLLQRYQERFAYLLIDEFQDINPVQFEIVKLLAMPQRNICVVGDDDQSIYRFRGSD-- 396 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLD 368 + + +F P+ ++ + + + Sbjct: 397 --------PRFIRSFTAHYPEAKTIHLVENYRSSHPIIASANRVIAENRTRLEKTLVAQH 448 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 D ++ + E ++ + + ++ + P +I V+ S + + + Sbjct: 449 TSDQLPYLFFPYNEEEEATMIVEEIKRLI--GKGICPSEIAVLYRTSTSVRALVDRLVDT 506 Query: 429 APADRYLPYAISDRRA-RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 P+++ A P + +S L + + ++ LL + + Sbjct: 507 TL-----PFSLEQGFACFYERPFVRRALSFLRIGRNEESPYVMVELLKALFIK------Q 555 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 E L L + EL + R + A ++ Sbjct: 556 EHLDQLLHIQKTERCSLLEAIPFLTELPAFQAKKLKTLPADCRRMQKMNPSEALAFAEAR 615 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 L +E+ + N + Q +E +L Sbjct: 616 LGLNETIKKQGQEGNKFEKGSDDFNQLKVAATQFETVESFLIHI---------------- 659 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 D + + + + Q + + T+ Sbjct: 660 -------------------------------DHVIAKQQECQTFQTRHPKSIQLLTIHRS 688 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F V ++G +G P A + + GD ++R L A+ A+++L Sbjct: 689 KGLEFSHVFIVGAVEGSLPHDYALDAW-------REGDDGPLQEERRLMYVAMTRAKKEL 741 Query: 728 YISYIGRSIQDNSERFPSVLVQ 749 IS P+ V Sbjct: 742 AISAPVH--YRGKRAHPTRFVC 761 >UniRef50_B9WE90 ATP-dependent DNA helicase, putative n=1 Tax=Candida dubliniensis CD36 RepID=B9WE90_CANDC Length = 859 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 61/645 (9%), Positives = 164/645 (25%), Gaps = 73/645 (11%) Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLT------------RQRRHSFEDRELPLFRDSENAG 284 N + D+K + LL + ++ + + Sbjct: 201 LAFLYNKYQASLADLKKLDFDDCLLECHKLVKNFPVLNYIKHVLVDEFQDTNEIQLQLMY 260 Query: 285 QLFNSD---------GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLL 335 + VG+P + I + + Sbjct: 261 HFAKGNINGDPKYQNNVTIVGDPDQGIYAFRDAQSINFEKMSNHYKSMKL------SLHK 314 Query: 336 HNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL-DSSIT-FHVC-HSPQREVEVLHDR 392 ++ + + + + L D SI + C S Q E + + + Sbjct: 315 ISLNENYRSTSGILNISETLMNQQKGRTPKLLKSQLDFSIKPVYSCLKSAQEEAKWIVYQ 374 Query: 393 LLAMLEE-DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVL 451 + +L + + +DI V+ + + + LPY + RA + Sbjct: 375 ISHLLSLPNSAVQGKDIAVLYR-----AAYQSRALEDELVKKGLPYKMIRGRAFWDRQEV 429 Query: 452 EAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 A + L + V+ L+ P + + + + L + + + + + Sbjct: 430 IAIMDYLKVCSDENEQAAVIRTLNYP----KRGLGPKTVESLGKIIEKQANQGKSVHQCL 485 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH-LASLLMQ 570 + + + + L L+ + Sbjct: 486 LAMTKKSGEPKIKLTIKQLQSVEEYYSMVTKVKSKLDEMKNCPDEDISNHAKELFDLIYE 545 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 + ++ + + L + + + ++ D Sbjct: 546 KSKLKQEFENDEDSSKRLN-----VEEVGNLLVQFKPKDEILPDYIDGSGDVEEEESVDD 600 Query: 631 AVPLSLLRDEL-----------AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG 679 L+ + + + + +++ T+ + + + VV + G Sbjct: 601 RNFLARFIESVGLYETNDEVENNKSDSNGNDKAKEEKSCISLSTIHGSKGLEWPVVFVQG 660 Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 +++G+ P + + +++R F A+ + LYIS S Sbjct: 661 LSEGLLPAGFSMRNSFNDND-------ENLNEERRCFYVAVTRTKVLLYISSYTESQSKA 713 Query: 740 SERFP----SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ 795 R S ++ L + S A + +++ + L+ D + Sbjct: 714 FYRQALDQESRFIEPLKKSLAHSQL-----AFSEEKNLRALYELLSKPFPTENLDWTQFY 768 Query: 796 PGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 ++S+ R + + + F Sbjct: 769 ETYKKSFRRFASGEPMVFSVGTEDKPAKSMNNFGFSSAQSLMNDF 813 >UniRef50_A6CDV1 UvrD/REP helicase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CDV1_9PLAN Length = 1171 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 124/1017 (12%), Positives = 256/1017 (25%), Gaps = 164/1017 (16%) Query: 67 SFIWDMFVRVLPEI---PKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRK 123 +D F + PE + + + +L + L+ + + R+ Sbjct: 184 RLEFDEFRELTPEQLAGRMRDFWEQNYIPMQLAEIAESDATLHLLRLMNSHEPSNPKLRQ 243 Query: 124 LFQ-LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQP 182 FQ L S+ +L D R + L ++G G + W + Q Sbjct: 244 RFQTLKSRIPELIDGAPQMRGELLGTLIDHAKIQGGGTKKDW---------DDVSIYEQI 294 Query: 183 RWHRANLYQRFIETLESATTCPPG-LPSRVFICGISALPPVYLQALQALGKHIEIHLLFT 241 R L + E+ + P G L + F + + + Q + Sbjct: 295 RDGFKELRETLKPVYETLSPDPAGFLAAAEFSLVVLRVSEYAAKCYQESKAEKGLLDFDD 354 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE----QDVGN 297 + +DP + ++ + SE L + VG+ Sbjct: 355 LLLQTRDLFRRDPNARQRAAAGIHYLMVDEFQDTDPVQSEIVRALCGKELLTGKLFLVGD 414 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV---- 353 + + D ++ P + Q IL N A Sbjct: 415 AKQSIYRFRRADP----EVFHQLRQEIPEKGRLPLSTNFRSQPAILNFTNCLFASAMAHY 470 Query: 354 --NIEEFSRSDNKRPL-------DPLDSSITFHVCHSPQREVEVLHDRLLAMLEED---- 400 ++ F + + P D I + E + + R+ +LE++ Sbjct: 471 YESLTPFDQQQHSPTPGIEFLFASPDDPDIKLADAI-RETEADWIAARIRQLLEDETPRI 529 Query: 401 ------------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 + P DI ++ + S S ++ A + L Y + RA + Sbjct: 530 WSKNPQSGERELRRVEPGDICILFRSLSSVS-----LYEKALQEHNLDYYLVGGRAFYAQ 584 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 + +L DS +L LL P + +++ + + + Sbjct: 585 QEIYDLSNLCQYLDSSDDELSLLGLLRSPFFSL----SDDTIYAITRHAES--------- 631 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 + + + E + Sbjct: 632 -----------------------------------LTAAMQVAPPDHVRPEQKRQVRYAQ 656 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 L R + +E L E + +I + Sbjct: 657 AVLQELRTKKDRLSLVELLNLALERTGYDAALL---NEFLGDRKLANLRKLIELARNFEA 713 Query: 629 GDAVPLSLLRD-----ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 L L + ++ + + + + T+ + + F VV + M+ Sbjct: 714 SGLFTLKDFVQRIRDSILEESKEELAATLPETSDVIRLMTIHQSKGLEFPVVIVADMDRR 773 Query: 684 VY-----PRQLAPLGFDL--------------MSQKPKRGDRSRRDDDRYLFLEALISAQ 724 P G L + D+ L A+ A Sbjct: 774 SQGASKDPFLHPEWGALLNLPAERGVTPENFAFKMHRAIEQNADEDETVRLLYVAVTRAA 833 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA------LNCDESEARVKA 778 L +S + R S ++ L + S LP + + + + + Sbjct: 834 DYLILSAGLPYDR----RVQSPWMKLLSRHFDLSTGLPTLDPYLGHFTMGNVQQDQIPEI 889 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQ 838 + + P + S L S G + V + L+ Sbjct: 890 RVHLNRPQTATKPAKKIKELKPSQFWAALEQGSPGGYPETFTVFAPQKNRQSHFSVSHLE 949 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF 898 A + ++ E + ++ ++ E+ Sbjct: 950 --VADAL------IQELPEPQYQRLSTADLLNADEATQLGTLTHSVIER-LDPLKPEQSD 1000 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLAD-----RVIACRQPGQSMEIDLAC------ 947 R G+ Q++ + + A R + +E L Sbjct: 1001 RIVELVLFDQPQVAGDKLKPLIQQQIAAWYESEICSALKAARVHYRELEFLLRLPATSDK 1060 Query: 948 -NGVQITGWLPQVQPDGLLRWRPSLLSVA-QGMQLWLEHLVYCASGGNGESRLFLRK 1002 + V +TG + V RW + QL E L+ G L + + Sbjct: 1061 ESAVTVTGMIDAVYQTDDQRWVVLDYKTGARLAQLADEELISEYEFQLGVYTLAVEQ 1117 >UniRef50_Q6CK20 KLLA0F14234p n=1 Tax=Kluyveromyces lactis RepID=Q6CK20_KLULA Length = 1064 Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 68/672 (10%), Positives = 163/672 (24%), Gaps = 104/672 (15%) Query: 129 SKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRAN 188 K + ++ +V PD + + + + W+ H Sbjct: 123 EKIKSILEELIVEMPDQIRDYACTKSYKNEVSLCRLKNNQWQ-------------VHPDM 169 Query: 189 LYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYW 248 + +R E A T +F + Y K + HL+ + Y Sbjct: 170 ILKRISELKADAITPEKYEQQAIFDEALLHFYQQYQ------AKLSKEHLIDFDDVMLYS 223 Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-----DGEQDVGNPLLASW 303 ++ ++ + ++ + Q +G VG+P + Sbjct: 224 FELLSKH---RVWKNIKHVLVDEFQDTNLLQIHLIFQFARGSHHSCEGVTVVGDPDQGIY 280 Query: 304 GKLGR---DYIYLLSDLE-SSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 G ++ ++ ++ + IL++ + + Sbjct: 281 GFRSALSHNFQTMIELCPIEYDQIVLKENYRS-------AQAILDISETVIKQQKSGRDN 333 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 R + + + + S E + +L + +D ++V S Sbjct: 334 REPLRAQFVTDNKPV-YMSFPSDDTEAYTITKEILYLKAIPGLFKYKDFAILVRLKRSL- 391 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 F +A +PY I +A I +S+ + E + ++ P Sbjct: 392 ----RTFENALIAHKIPYVIQKGYTFWELKECKAIIRYMSMICNDDDWESLKRTINYPNR 447 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL------------PATGQHTWRFG 527 + + + + Sbjct: 448 GVGETTVGKIAAAFEKESTAEKNETAFSFLQKIARDSVKINISNSSMIGIKDYVNIIEQV 507 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 Y+ + + +GL + S + + R L Sbjct: 508 RKFFSEIYSDAGKSTIADAFEKFYVLTGLRGQYKPEKKSGSIASDDQSTEKEAHRHLNVL 567 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 L D + E + + ++ + + D Sbjct: 568 NVKNYFSTFKIPLGDGDGEPRIVDLIGFCHEFVSFTDLYTFNEDN-------------DN 614 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP------ 701 + V + T+ + + + VV + +G+ P + Sbjct: 615 DVKDDHETKDAVVLSTIHASKGLEWPVVFVPQCVEGLLPSYYKDSSDMPAPDEDSDENMA 674 Query: 702 -------------------------KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 K+ R+ ++R +F AL A+ LYI+ + + Sbjct: 675 VGDAYNEPTDSQDDNRDGKNPSSPTKKKSRTSFSEERRMFFVALTRAKYLLYITTVEKEA 734 Query: 737 QDNSERFPSVLV 748 S + Sbjct: 735 TSFK----SRFL 742 >UniRef50_B3SEY0 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SEY0_TRIAD Length = 863 Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats. Identities = 43/351 (12%), Positives = 101/351 (28%), Gaps = 38/351 (10%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRV---FICG-I 216 Q Q L K L++ + + LY +I + P L S+ + G + Sbjct: 493 NQDDQIRLIKQLIKDFGLDDKNTSAKVLLY--YINRFKDRAIMPKNLSSQEVEHYANGKL 550 Query: 217 SALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYL--AKLLTRQRRHSFEDREL 274 + + Y L+ LL N + + + + ++ + Sbjct: 551 NEIYCEYQNRLENFNAMDFGDLLLNNI------RLFNENLDICEYYQNKFKYILVDEYQD 604 Query: 275 PLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDN 333 L VG+ + + G + +L F PD Sbjct: 605 TNIAQYLWVRTLSQKHNNICCVGDDDQSIYAWRGAEITNILR----------FDKDYPDA 654 Query: 334 LLHNIQSDILELENR---AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLH 390 + ++ + ++ A ++ + S + + + + E + Sbjct: 655 KVIRLEKNYRSTQHILSLASNLISNNKNRHSKVLWTDQKDGNKVKIINYYDDKEEARAIA 714 Query: 391 DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 D + M+E DI ++V + + F + +PY I Sbjct: 715 DEI-DMVERLKKTKLSDIAILVR-----AGYQTRNFEESLNFLGIPYRIVGSTKFYDRLE 768 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 ++ I + L ++ + +++ P + I + + S Sbjct: 769 IKDCIGYIRLLVNKEDNLAFERVVNTP----KRGIGNSTIMNILNTAKNSN 815 >UniRef50_Q71X99 ATP-dependent helicase/nuclease subunit A n=17 Tax=Listeria RepID=ADDA_LISMF Length = 1235 Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats. Identities = 76/915 (8%), Positives = 222/915 (24%), Gaps = 183/915 (20%) Query: 193 FIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIK 252 ++ LE L V + + + + L D + Sbjct: 337 YLSDLEKMKPDIKTLSRLVKKFAENFFEEKQQRGVLDFNDLEHLALKI------LLKDNE 390 Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG----EQDVGNPLLASWGKLGR 308 + + ++ + + NS VG+ + + Sbjct: 391 ASEVAKNYQKQFKEVLIDEYQDTNMVQETILRLVTNSGEEQGNLFMVGDVKQSIYRFRLA 450 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 + ++ ++ Q+ + D + + + A I + +D Sbjct: 451 EPTLFMTKYQTYQQDGNGSGIRID-----LSQNFRSRKEVLDATNFIFHQLMDKHIAEID 505 Query: 369 -PLDSSITF---------------------HVCHSPQR-----------EVEVLHDRLLA 395 + +T + E + ++ Sbjct: 506 YDAAAELTLGASFPETTDMATELLLIDMKSVESETEDELSPQELQKNQVESRAIAMKIKE 565 Query: 396 ML-----------EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 M+ +++ + RDI+++ + S A + +P+ ++ Sbjct: 566 MIDNKFPIFDKKMKQNRPIQYRDIVILARAMTSAPDM-----EEAMKVQDIPFYANNNSG 620 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 + I+L+ + D+ + + A+L P++ Sbjct: 621 YFETTEVATMIALMKVIDNPYQDIPLAAVLRSPIIGLN---------------------- 658 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 + + + ++L Y + ++E + Sbjct: 659 -----------------------EEELGQVRMAKKNGYFYDALLTYKD--TTVSETADKM 693 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 + + QLN WR +E + ++ F+ + + Sbjct: 694 SDFIQQLNNWRELSIRENLTSLIWQIYQETNFYEFVGGLPGGKQRQANLRALYDRANQYE 753 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQ--RFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 + + L R D ++ V + T+ + + F VV + G++ Sbjct: 754 KTSFRGLFRFVRFVERLEVRGDDLGTAKTLGEKEDVVRMMTIHASKGLEFPVVIVSGLSR 813 Query: 683 GVYPR----------------------QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 R ++ + ++ R ++ + AL Sbjct: 814 KFNMRDIYSKTLLDKDYGFASNYRDIEKMIVYPTIMQQAMKQKKSREMIAEEMRVLYVAL 873 Query: 721 ISAQQKLYISYIGRS-----------IQDNSERFPSV-------LVQELIDYIGQSHYLP 762 A++KL ++ ++ P+ + + + + Sbjct: 874 TRAEEKLILTATVPDFEKTSKNWLQVAKEKETILPASTRAKAKCYLDWIGNATIRHPNFK 933 Query: 763 G---DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP---AASQAGKA 816 +E + ++ +++ + + + + + +E P + + Sbjct: 934 ELLCEEMIQTLPTDMKLQIEIKTKEMFLTNELEKTETVNWLENIKEHQPIPVKSPYKDEI 993 Query: 817 HSEFVQPLPFTLPETVP----LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL 872 + + L+R ++ L+ + + L Sbjct: 994 QRYMNYEYQNEEATEIRAKQSVTELKRQFSLQDSWSDTTLLKEFQKVSLDRPKFLQQNKL 1053 Query: 873 EGLSRYQINQQL-----LNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 L L ++D E+L + R L I + + Sbjct: 1054 SATEIGTAMHTLMQAVSLEHQPTKEDLEQLLQTMREKDILTEAQLKAINIKQVLGFFESQ 1113 Query: 928 ADRVIACRQPGQSMEIDLA--------------CNGVQITGWLPQVQPDGLLRWRPSLLS 973 + + ++ E+ + V I G + + + Sbjct: 1114 LGKTMLQKKDLVKREVPFSYLLPVSELYEKVDIDERVLIQGVVDSMIEEEE-TITLIDYK 1172 Query: 974 VAQGMQLWLEHLVYC 988 + + Sbjct: 1173 TDKIEGRYSNWEAAE 1187 >UniRef50_B5RLS9 DNA helicase n=24 Tax=Borrelia RepID=B5RLS9_BORDL Length = 698 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 58/513 (11%), Positives = 144/513 (28%), Gaps = 84/513 (16%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ-DVGNPLLASWGKLGRDYIY 312 ++ R + ++ + + +L+ D VG+ + + G Sbjct: 199 ENIRMRVQKRFKAIFVDEYQDTNYSQFLFLRELYYKDAYFMVVGDEDQSIYSFRGARVEN 258 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS 372 +L E + D L L + N A ++ + + + Sbjct: 259 IL-------EFERTFDNVSKYYLVQNYRSSLSIVNVANNIISKNQNRYDKVIATENKIGK 311 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 I + +P E E + L+ + V+ F A Sbjct: 312 KIKIFIFQNPTEEAEYFANFLIENKL--------ETAVLYR-----FNHQSLQFEKAFFK 358 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 + + I ++ ISLL L ++ L +++ P + + + Sbjct: 359 NNIAHKILGSIRFYEREEIKDVISLLRLFVNKKDKVSFLRIINKPA----RGLGKTTIDK 414 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 + +N++ + + + + Sbjct: 415 IIATLNDTDVNLDLMLASRKV--------------------------------------- 435 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 L + L L + + + + +D+ F + + + Sbjct: 436 VKNLKGKARDSLDIFLSLYDELKENIQK-GIYVNLSEFIKDVTMGFGIWNYYQKFDKDEK 494 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 + +I+ G+ L + + + A V + ++ ++ + F Sbjct: 495 SKNIDELISSGVEYSGS-FEGLVIFLE----NSSLSPLVHGDFASSVLLSSIHGVKGLEF 549 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 V + G+ G+ P + + R +++R LF A+ A+ +L+I+ Sbjct: 550 DRVIISGLEKGLLP------------AEIEELTADRLEEERRLFYVAITRAKFELFITIN 597 Query: 733 GRSIQDN--SERFPSVLVQELIDYIGQSHYLPG 763 + SV QE+ ++P Sbjct: 598 LQRFFRGILKNTAISVFFQEIHKDNYDIVFVPE 630 >UniRef50_C0W129 DNA helicase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W129_9ACTO Length = 1119 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 100/859 (11%), Positives = 210/859 (24%), Gaps = 171/859 (19%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 P +A++ + ++ + E LF VG+P A +G G Sbjct: 225 PTVVAEIRSEYDAVLLDEFQDTSVGQMELLSTLFKDMSVTAVGDPNQAIYGWRGASAAS- 283 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS-----RSDNKRPLD 368 L + + +IL+L N A + + + + D Sbjct: 284 LDLFPIMFAQQMETKTFSLSKAWRNKENILDLANLISAPLAQKTYPGVDVIKLVASNSED 343 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAM----LEEDPTLTPRDIIVMVADIDSYSPFIQA 424 I+ + E + +++ ++ + ++V + P I Sbjct: 344 ADKGKISVFYPATNVEEYRYVAEQVKKWKQTYIDPHSGVNDETYAILVRSRRHFLPMI-- 401 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 A + L A+ + PV+ ++L+ V+ LL L+AR Sbjct: 402 ---EALEAQGLEAAVVGLGGLVTQPVIADLRAILAASIDPLDGPAVMRLLTNLDLSAR-- 456 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 ++ L W + + ++ G LL + W Sbjct: 457 ----DIKVLYSWATQLSKKR-----------------NSLEVGRQEFLLDAVDNPPEVGW 495 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 + D +G A + L +L R L + R + Sbjct: 496 SA----DGGAGFSARGHQQVQLLRDRLAAVRAVLDFDVSYI-VSKAIRVFDLDVEVDADP 550 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF----LAGPVN 660 + I + + L+ D L ++ E+ + + + Sbjct: 551 YLNLAGTAVDAFLEIANDYA--SQTEYANLANFLDWLETTVEAEQGLKAPTAQVDSSVIQ 608 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQ--------------LAPLGFDLMSQKPKRGDR 706 I T+ + + + V ++G+N+G +P + FD Q G Sbjct: 609 IMTVHQAKGLEWDRVAVIGLNEGGFPSYEGAHFIKYENPATLKSGFSFDARPQSGWLGTI 668 Query: 707 SRR----------------------------------DDDRYLFLEA------------- 719 + + Y A Sbjct: 669 ADLPHNLRQDYTFKGEAQILPGVPEFDQYEDCDALEAAIEAYRLDLAYYQEREERRLAYV 728 Query: 720 -LISAQQKLYISYIGRSIQDNSERFPSVLVQE-LIDYIGQSHYLPGDEALNCDESEARVK 777 +++L +S I S + PS + E + I E + +E Sbjct: 729 AFTRPKKELVLSGAWYRIGTKSTQLPSRYLTEGIHAGIVNPTVFADAETTEVEAAENYSF 788 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYARE-------------------------------- 805 + + D +N + + Sbjct: 789 SGPALIWDAPDLDVENLVVNQETTQIPRKPGVSRKLINDSGSRVLSQIAQRLNTSGMEIT 848 Query: 806 --------------WLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQM 851 A E + ++ H Sbjct: 849 ELDFDPADKQQAELIYTAQRALDAYKKRLADKTIEVSVERLSATSVTSLLLHQKEF--AQ 906 Query: 852 RLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGA 911 RL+ E S+ + Q+ A E + + A + + Sbjct: 907 RLRRPVPAEPSDAALLGTIFHAWAQTW--CQKAGQASAEAEPLQAETAENSAETTVSFDP 964 Query: 912 FGEIFWETQCQEMQQLADRVIA------CRQPGQSMEIDLACNGVQITGWLPQVQPDGLL 965 + ++ +L +R G + L + I G + + Sbjct: 965 DTLTQKQKL--QLGKLQERAKEIFTDELSTVVGLEVPFSLKHEQLTIRGQIDVL-AKADG 1021 Query: 966 RWRPSLLSVAQGMQLWLEH 984 +WR + L +H Sbjct: 1022 KWRVIDWKTGRPPVLDEKH 1040 >UniRef50_A0AL18 ATP-dependent helicase/nuclease subunit A n=3 Tax=Listeria RepID=ADDA_LISW6 Length = 1235 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 76/922 (8%), Positives = 218/922 (23%), Gaps = 183/922 (19%) Query: 186 RANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCR 245 + ++ LE + V + + + + L Sbjct: 330 FSREETNYLADLEKMKPDIKTISELVKNFANNFFEEKQRRGVLDFNDLEHLALKI----- 384 Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG----EQDVGNPLLA 301 + + + ++ + + NS+ VG+ + Sbjct: 385 -LLKNDVPSDVAKSYQKQFKEVLIDEYQDTNMVQETILLLVTNSEESKGNLFMVGDVKQS 443 Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 + + ++ + Q+ + D + + + A I Sbjct: 444 IYRFRLAEPTLFMTKYQEYQQNGEGEGIRID-----LSQNFRSRKEVLDATNFIFHQLMD 498 Query: 362 DNKRPLDPLDSS--------------------ITFHVCHSPQR-------------EVEV 388 + +D +++ I + E Sbjct: 499 KHVAEIDYDEAAELTLGANFPKSNHMATELLLIDMKSNENESEDELSPQELQKNQVEARA 558 Query: 389 LHDRLLAM-----------LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 + ++ M L+++ ++ RDI+++ + S A + +P+ Sbjct: 559 IATKIREMIDNKFPIYDKKLQQNRSIQYRDIVILSRAMTSAPDM-----EEAMKVQDIPF 613 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 S+ + I+LL + D+ + + A+L P++ Sbjct: 614 YASNNSGYFETTEVATMIALLKVIDNPYQDIPLAAVLRSPIVGLN--------------- 658 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 + + + ++L Y + + Sbjct: 659 ------------------------------EEELGQIRMAKKKGYFFDALLAYKDITVSA 688 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 A ++ + QLN WR +E + ++ F+ + Sbjct: 689 AA--DRISDFITQLNNWRELSIRENLTALIWQIYQETNFYEFVGGLPGGKQRQANLRALY 746 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ--RFLAGPVNICTLMPMRSIPFKVV 675 + + + L R D ++ V + T+ + + F VV Sbjct: 747 DRANQYEKTAFRGLFRFVRFVERLEVRGDDLGTAKTLGEKEDVVRMMTIHASKGLEFPVV 806 Query: 676 CLLGMNDGVYPR----------------------QLAPLGFDLMSQKPKRGDRSRRDDDR 713 + G++ R ++ + ++ R ++ Sbjct: 807 IISGLSKKFNMRDIYSKTLLDKDYGFASNYRDIEKMIVYPTIMQQAIKQKKSREMIAEEM 866 Query: 714 YLFLEALISAQQKLYISYIGRS-----------IQDNSERFPSV-------LVQELIDYI 755 + AL A++KL ++ P+ + + + I Sbjct: 867 RVLYVALTRAEEKLILTATVPDFEKTSKNWLQVSNQKETILPASIRAKAKCYLDWIGNTI 926 Query: 756 GQSHYLPG---DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP---A 809 + +E + +E +++ + + + + ++ + P Sbjct: 927 IRHTSFKDLLCEERIQTLPTEMKLQIEIKTKEMFLTTELEEHKADNWLENVKAHEPVPVQ 986 Query: 810 ASQAGKAHSEFVQPLPFTLPETVP----LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 ++ + + + L+R ++ L+ + Sbjct: 987 SAYKDEIERFMNYKYKDVAATEIRAKQSVTELKRQFSLQDSWSDTSILKEFQKVSLDRPK 1046 Query: 866 DTEPFILEGLSRYQINQQLLNAL-----VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQ 920 + L L+ A+ + D L + + L I + Sbjct: 1047 FLQQNKLSATEIGTAMHTLMQAVSLTYKPSEKDLTSLLQSMQEKDILTEAQIKAINIKQI 1106 Query: 921 CQEMQQLADR--VIACRQPGQSMEIDLAC------------NGVQITGWLPQVQPDGLLR 966 + Q + + V I G + + + Sbjct: 1107 MGFFDSPLGETVLQKSDQVKREVPFSYLLPVAKLYKQSDLEEHVLIQGVVDSMIEEEDA- 1165 Query: 967 WRPSLLSVAQGMQLWLEHLVYC 988 + + Sbjct: 1166 ITLIDYKTDKIEGRYANWEAAE 1187 >UniRef50_B1I493 ATP-dependent helicase/nuclease subunit A n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=ADDA_DESAP Length = 1230 Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats. Identities = 93/968 (9%), Positives = 207/968 (21%), Gaps = 177/968 (18%) Query: 156 EGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICG 215 G+ + + A + + + + L + G Sbjct: 292 AGVDQELKDLCSRCRK-KAKERIQNLKETFFARRPEELLSEMAALGPAMRRLAALAADFG 350 Query: 216 ISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELP 275 + + L L A L ++ + Sbjct: 351 EAYRTAKLARNLVDFADLEHYCLQILLAPGSTPEAPVPSPVAAGLREYYVEVLVDEYQDI 410 Query: 276 LFRDSENAGQLFNSDG----EQDVGNPLLASWGKLGRDYIYLLSDLE---------SSQE 322 + D VG+ + + + L ++ Sbjct: 411 NAVQETILRLVSRQDAAAPNLFMVGDVKQSIYRFRLAEPALFLEKYRAFDTGEDAGGARR 470 Query: 323 LDAFVDVTP-DNLLHNIQSDILELENRA---VAGVNIEEFSRSDNKRPLDPLDSSITFH- 377 +D + ++++H + + + A +A E L+ + H Sbjct: 471 IDLSHNFRSRESIIHAVNAVFRRIMTPAVGELAYDTAAELVCGGTPAQLEGSGPPVEVHL 530 Query: 378 -------------VCHSP------------QREVEVLHDRLLAM--LEEDPTLTPRDIIV 410 QRE ++ + + L + T+ RDI+V Sbjct: 531 LGAPTSVGRDTAGTADDEPDRSDEADLTAVQREARLVAGIIRRLAGLGGECTVPYRDIVV 590 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 ++ + + + +P +E +SLL + D+ + Sbjct: 591 LMRATTGKAG----TYLEEFRRQNIPAYAKVGTGYFEAVEVETVLSLLKVIDNPHQDIPL 646 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 +L P++ G Sbjct: 647 AGVLRSPLVGL---------------------------------------------GAAE 661 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 + + +++V+ G + + LA L +L WR + V Sbjct: 662 LAAVRLADKEGDFFRAVVAAAGQGGRLGAV---LAGFLERLEKWRSQARCGSLADLIWDV 718 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 R ++ A + + + + L + Sbjct: 719 YRTTGYYDYVGGLPGGAGRQANLRALYDRARQYEATAFRGLFRFLRFIELLQEGGQDLGP 778 Query: 651 SQR--FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY----------------------P 686 + V I ++ + + F VV L M Y P Sbjct: 779 APALAESENVVRIMSIHQAKGLEFPVVILADMGRRFYMPDLNGEVLLHKDLGLGPYFVDP 838 Query: 687 RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS------------YIGR 734 +R R + ++ + A+ A+++L ++ + Sbjct: 839 GARVSHPTAAWHVVRERLRREQLAEEMRILYVAMTRARERLILTGSAGRLEQAVLRWSHA 898 Query: 735 SIQDNSERF------PSVLVQELIDYI---GQSHYLPGDEALNCDESEARVKAHLTCLHT 785 + D + ++ + L + + +H Sbjct: 899 AAGDGETLPVPVLAEAESFLDWVMPVLMAHPDGEPLRRLAVRSRPAAGTPKDRSRWEVHL 958 Query: 786 RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPV 845 P D + + + A A + + L P L A Sbjct: 959 HRPEDLEEAAGADPDTAAVLESLRRLAPIPADGGLDEAVHRALSWHYPWSALASCGAKIS 1018 Query: 846 RAFFQMRLQVNFRTEDS--------EIPDTEPF-----ILEGLSRYQINQQLLNALVEQD 892 + R E+ P F L + + +L L Sbjct: 1019 ATEVKRRFAAAAAGEEEVPAVFPYRAPPARPAFLETARGLSPQAFGRAMHVVLQHLDLAG 1078 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ------LADRVIACRQPGQSMEIDL- 945 D R + AG E L R+ + L Sbjct: 1079 DLSVDGIRAQVAGLEEREFLTATEARAIDAEKLAGLFAGGLGRRLAGALWVRREWPFCLV 1138 Query: 946 -------------ACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGG 992 V + G + + + + L G Sbjct: 1139 VPAHEIYPGLEGHPEERVMVQGIIDCLFAEPDGLVLV-DYKTDRVGPGGEAALADRYRGQ 1197 Query: 993 NGESRLFL 1000 + Sbjct: 1198 LDLYARAV 1205 >UniRef50_A5DGH7 Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DGH7_PICGU Length = 830 Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats. Identities = 68/605 (11%), Positives = 161/605 (26%), Gaps = 76/605 (12%) Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA--LGK 232 Q Y+ I +L+S P +S+L Y ++L A L Sbjct: 137 KNPQQNDDEKQDTKRYRAKISSLKSRAITPIVFKKSHSDEYLSSLYETYQESLTAAKLLD 196 Query: 233 HIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-- 290 + + Y +L + ++ + + + Sbjct: 197 FDDCLVRCHELLLQYP-----------VLNFVKSVLVDEFQDTNEIQLQLMYEFAKGHPS 245 Query: 291 ------GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE 344 VG+P + +G + + + + ++ + Sbjct: 246 DQNLQNNVLIVGDPDQSIYGFRDAQVGNF------KKMVTFYENKGLSCTTILLEENYRS 299 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDS---SITFHVCHSPQREVEVLHDRLLAMLEE-D 400 +I +S + L + ++E + ++ +L Sbjct: 300 TAGILDFSESIMRQQKSRTIKNLRSQKNATYKPVIASLKGSEQEGRWIVYQIETLLSLPG 359 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 L DI ++ + + R +PY + +A + F+ L + Sbjct: 360 QPLRHEDIAILFR-----AAYQTRAVEQELTRRGIPYLMLRGKAFWDRKEVVVFMDYLRV 414 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 + ++ L+ P + I E+ ++ + + S + Sbjct: 415 VSNESDRLALVRTLNYP----KRGIGEKAMKLIENELQNSANS----VHQTLVAFCKSGQ 466 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 + LG + + +D+S S L + + Sbjct: 467 LSSKTKEGLSAYLGLIERCREHLDHYEMTHDKSLLERLSSELLRDSGLQT--EFEDDSNK 524 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV-PLSLLRD 639 + E D ++Q + + Q D + Sbjct: 525 MLNITEVQRQLLDFEPQ---------------DEQIELFVGGSENDQADDPFNHIQKFVQ 569 Query: 640 ELAQR-LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 + ++ S+ + + T+ + + + V + G+++GV P A Sbjct: 570 AIGLYESEESAQSKEKSTSRITLSTIHGSKGLEWHTVFVPGLSEGVLPAGFAIAD----- 624 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYI-SYIGRSIQDNSE--RFPSVLVQELIDYI 755 D++R F A A+ LYI SYI + + S + ++ + Sbjct: 625 -----NSEQSADEERRCFYVATTRAKTLLYISSYIEEEGKWGRKPIEAVSRFLTKIKPDM 679 Query: 756 GQSHY 760 Sbjct: 680 ISEFQ 684 >UniRef50_Q6KHF3 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mobile RepID=Q6KHF3_MYCMO Length = 742 Score = 162 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 62/513 (12%), Positives = 152/513 (29%), Gaps = 68/513 (13%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 P K ++ + F++ E ++ VG+ + Sbjct: 224 PEIRKKWSQYFSYILIDEFQDLGFQEYEILKKIAMKTPIMIVGDTNQTIFS--------- 274 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS------DNKRPL 367 + + F + P+ + ++ + ++ A N+ + + + Sbjct: 275 -PKYTDVKYMSKFHEDFPNVQIFHLNKNYRSNKSIIEAVNNLMKKNNTSFESSIKEMEAQ 333 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + + I + S E + ++ + + +DI + F F Sbjct: 334 NLEEEKIVYQQAFSTDAEARWVVHKINKLKRN--KVQLKDIAIFYRS-----SFYTKSFE 386 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + + I D ++ IS L + S L +L+VP Sbjct: 387 DELEKAEINFQILDDNKFYERDEIKDCISFLRVLHDG-SSTTFLRILNVP---------- 435 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 R + LE + L + E Sbjct: 436 --------------NRDVSVTFEKKLLEYAESRNENIYDALINLFKDTKKEVTSKM---- 477 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM-LNAFFLPDAETE 606 + + ++ +L +L+ +R L + + ++ + D Sbjct: 478 --KLQWNTKNKTILLNLVNLINSFRKYRNALKKYPIYKSLHGFLEEVKYYDYLKDDDAGS 535 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 I + +I + L+ +E++ L + V++ + + Sbjct: 536 DKEKNILELLNSIK---IWENANRNKNLADYLEEIS--LISSKYKSPLSKNSVSLISAIH 590 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + FK V ++G+++ ++P + + K G D++R LF AL A + Sbjct: 591 SKGTQFKNVFIVGLSEYIWPNIK------SIEELEKTGSSDLIDNERRLFYIALTRAVDR 644 Query: 727 LYISYIG--RSIQDNSERFPSVLVQELIDYIGQ 757 +++S + ++ PS + E+ + Q Sbjct: 645 IFLSDSQGFFNSDLKYKKSPSRFLNEIGIDLQQ 677 >UniRef50_Q30SL2 UvrD/REP helicase n=12 Tax=Epsilonproteobacteria RepID=Q30SL2_SULDN Length = 692 Score = 162 bits (408), Expect = 9e-38, Method: Composition-based stats. Identities = 50/503 (9%), Positives = 129/503 (25%), Gaps = 56/503 (11%) Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQEL 323 + ++ + + VG+ + + G D + Sbjct: 208 YKEVLVDEYQDTNALQGTLIDAMNPP-SLFCVGDYDQSIYAFNGADIS----------II 256 Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD----PLDSSITFHVC 379 +F P +H + + + E + + L+ Sbjct: 257 GSFSTKFPSAKVHTLTKNYRSTVPILSLATKVIEHNERIYPKKLEVTRVHDSHPPRLLAY 316 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 + + ++ + +I V+ + S + + Sbjct: 317 DELFDQYHDIAFKI-----SNTQTPRDEIAVIFRNNSSADGI-----EVGLRELGITCKR 366 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 + ++A + +L + + L + L + + Sbjct: 367 KGGTSFFDSREVKAVLDFYTLLINESDMMAFIHLF--EFARGVGSAVAKELYLALKMLGH 424 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGL--TRMLLGYAMESAQGEWQS------VLPYD 551 + +G+ + + + GL + LG + A+ ++ +L + Sbjct: 425 GSVFYGLYAPDESISNPFEKRKLNQQLGLFDDFLELGSVGKFAKCGFEDKFMRNPILKHP 484 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE--EWLPVCRDMLNAFFLPDAETEAAM 609 + + A + L L R + E + L+ + Sbjct: 485 KLTKENATFLHDFYLLYRDLKGVREPRVIVAKIAKSEIYKYIAEYLSNRRALLKDGTIDE 544 Query: 610 TLIEQQWQAIIAEGL--GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 I + + + + + VN+ ++ Sbjct: 545 KQKADSLSNIARKMVLLEELSKPYSEHERFLNAMILGSSDLTQGE-----GVNLLSVHAS 599 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + +K V ++ + DG +P + D++R LF A+ A+ L Sbjct: 600 KGLEYKEVYIVDLMDGRFPN------------RKLMQRGGSLDEERRLFYVAVTRAKDIL 647 Query: 728 YISYIGRSIQDNSERFPSVLVQE 750 Y+SY PS + E Sbjct: 648 YLSYAKYDKIKKLNFVPSQFLYE 670 >UniRef50_D2PY24 ATP-dependent nuclease subunit B-like protein n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PY24_9ACTO Length = 1050 Score = 162 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 141/1061 (13%), Positives = 273/1061 (25%), Gaps = 162/1061 (15%) Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDK 121 F + + V + +A+ ++ +L ++ +L + + L D+ Sbjct: 6 FSVFGDRPKRIGGTVSGTRIETTAYGAAALD-RLHHVVTRLKAGDPMKPVTLLLPDNLTG 64 Query: 122 --RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWK-ALVEYTHQ 178 + ++ A L YL P Q G L + A W+ AL + Sbjct: 65 VVARRHLAATGVAAL---YLATLPRLAEQLAAGLLAPRRPATRPIVAATWRTALSKAPGV 121 Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 + H + + E PGL + S L P +Q Sbjct: 122 FDEVAEHPSTIQALAAAHRELRDLSDPGLEK---VAAASGLGPSLIQL------------ 166 Query: 239 LFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNP 298 + C D D L + T + P + L+ Sbjct: 167 -HRHVCDQLQTDWYDETDLLRAATERAT------ADPAAVAELGSLVLYLPQELTQAEAS 219 Query: 299 LLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 +AS G D ++ + + A ++E Sbjct: 220 FVASLGIAAADVTVIVGLTDVKRADRAVRR-------------------------SLERI 254 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 + EV + +LA LE+ P + V+ A Y Sbjct: 255 GIDLPPSISKNYPVATEVLNASDADDEVRCVVRDVLATLEKTPAHR---VAVLYAAATPY 311 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 + + A + R + + +L+L D D+ L Sbjct: 312 ARLLH----EHLAAAKVTVNGPGTRPVHERALARTLLEVLALVDHDLPRADLFRALANAP 367 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 F + + +G+ G D D R Sbjct: 368 TR-DFTGERIPVPQWERLSRAAGVVRGDDWDVRLARYAD----------TERRTADQERG 416 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 + + ++ L L +LN + L + D+L + Sbjct: 417 AEDPRPAVARRAEHNASHALRLHAFAVELRRRLNAAALMESWSELSHVVLRLFHDLLGDY 476 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 E + A +E + + + G L++LRD L L Q Sbjct: 477 ASLPVEEQYAAVAVEGTLRGLSTL---DELGTPASLTVLRDVLDLELQQSLPRVGTFGTG 533 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG-----DRSRRDDDR 713 V + L + VV ++G+ + +YP +L + R R D + Sbjct: 534 VLVAPLSASIGLSVDVVFVVGLAEDLYPGRLHEDALLPHRVREAAAPELASARDRLDRKQ 593 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 L A + ++ S+ ++ +S R P+ + + + H L Sbjct: 594 RHLLAAFSAGASRVVASFPRGDLRRSSRRLPTRWLLGTLRELSGDHALAATVWDQASYDG 653 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQ----------- 822 + + P Q + ++ A + +A Sbjct: 654 HLLTSASYSGSLTTAKLPATEQDWQVRAAAAGLTLTDAVVDRARLLLRARAADEFTRFDG 713 Query: 823 --------PLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 P T +L+ + A P F + LQV ++ ++ Sbjct: 714 NLSGVDGLPDYATEDRIASPTSLEAYAACPHAYFVERLLQVQPLEAPEDL-----LVISP 768 Query: 875 LSRYQINQQLLNALVEQDD---------------------AERLFRRFRAAGDLPYGAFG 913 + + L+A V + L +RF A G + Sbjct: 769 VQVGNLIHNSLDAFVTRLAGSLPGYGEPWSPEQRSLLLTIGADLAQRFEAEGLTGHPRLW 828 Query: 914 EIFWETQCQEMQQLADRVIACRQPG----------------QSMEIDLACNGVQITGWLP 957 + ++ L D R +EI + V + G Sbjct: 829 QRERLRILGDLMVLLDDDDRWRAEHNASVVASELRFGLDGEPPVEIPIPSGRVLLRGSAD 888 Query: 958 QVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQAL 1017 +V + + + Y A + + G P+ A A Sbjct: 889 KVDLGKDGTIYVTDVKTGGFSR-------YEAIENDPVAA------GTKLQLPVYAYAAR 935 Query: 1018 HYL--------SQLIEGYREGMSAPLLVLPESGGAWLKTCY 1050 L + + G P+ + PE ++ Sbjct: 936 ARLGDESTPVEAAYWFVRKGGRRIPVPLTPEVAERYVHALD 976 >UniRef50_C0QTS0 Putative UvrD/REP helicase n=1 Tax=Persephonella marina EX-H1 RepID=C0QTS0_PERMH Length = 1021 Score = 162 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 110/1018 (10%), Positives = 279/1018 (27%), Gaps = 128/1018 (12%) Query: 2 LRVYHSN-------RLDVLEALMEFIVERERLDDPFEPEMILV----QSTGMAQWLQMTL 50 L++ SN + + +L+ I++ ++ ++ Q + ++ L Sbjct: 72 LKLLFSNFRNVQHSYIGTIHSLLLRILKANPDKSGITEDIKVIDDLQQEALFFESFEIFL 131 Query: 51 S---QKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLERED 107 ++ GI AN + + I+ +F + + K + K+S+ + + +L E+ Sbjct: 132 EKNRERAGILAN--YFSGKNQIYTVFKNIYANLWKIERYRKESIEER-EGYIKRLKEKAL 188 Query: 108 FTL---LRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAW 164 L ++ + D D ++ L + D++ + R + E L + Sbjct: 189 KLLDDFIKDHYRDFVDSQEF--LKTDLKDIYTKIKQERFTQIKV-EKNKNFPKLLKH--- 242 Query: 165 QAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYL 224 K + + + L + I TLE L + + L Sbjct: 243 -----KNVKNHRSLKSLDKEKVLELEDQLINTLEELRNNALYLNFLIILDNFDEF----L 293 Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG 284 Q + + + R ++ P L + R + ++ + ++ Sbjct: 294 QIFEEKKRENHLITYSDIILRSKEIFLRYPDLLEEYRERFKAFFIDEFQDTDQIQTDIIR 353 Query: 285 QLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH------NI 338 L G+P + D +S E +E V L + Sbjct: 354 MLSERSDLIVFGDPKQCIYEWRSADLYNYISFTEDFEERTLNVCYRSGPSLVGFFNLFFV 413 Query: 339 QSDILELENRAVAGVNIEEFSRSDNKRPLDPLD------SSITFHVCHSPQREVEVLHDR 392 ++D L + + + + S E L ++ Sbjct: 414 ENDFLNRDYSNRKVKELYHLEEKYIPELFYSSEKSLDITDPVEIVKTESD-TEPVALAEK 472 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 + +L + +P DI+V+ +I +P+ + + Sbjct: 473 IKQLL--NSGYSPEDILVLFRSRSKTDRYI-----QELRKSNIPFISFLSSNFYNSVEVI 525 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 +++L L + +L +L PV F +++ + +R + I + + Sbjct: 526 TVLNILKLIQYPYDQLTLLKVLKSPV----FSFSDKEIYQIRNDLYIDRIPQLKEIKRLE 581 Query: 513 ELELPATGQHTWRFGLTRMLLGYAM---ESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 E++ + + + + ++ + + L + Sbjct: 582 EIKDSLNISQILDRVYRDLPVLEIFSLYPDGKQKVANLEKLKFIADRLEGENFQLRDFIQ 641 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 L R ++ + + M + + ++ Sbjct: 642 FLEDNRYKDEEDALITTDDRFVKVMTMHRSKGLEAKVVIIPGLSERINR----------- 690 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 + DE+ R+ + + R++ F Sbjct: 691 STNGFFTVEDEIMVRIRDDYNREV-------------ARTLNFD---------------- 721 Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS-ERFPSVLV 748 ++ R +++ L A A+++L + Y G N E + Sbjct: 722 -----------EEKVKRKIYLEEKRLLYVAFTRAKERLILFYSGSKGYMNEIETVIERIN 770 Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP 808 + + Q + + + ++ + +N + E Sbjct: 771 GKEVTVYTQDRKPVSFKLEIKMTEPSGISNNIRYWSDIIKRQDRNIMEKLKLLKDEEEGR 830 Query: 809 AASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTE 868 ++ + + E ++ F + + E +T Sbjct: 831 KEEFEKAVSAKIFTTVSALIDEKNEKSVVEEF----------QISEDDSLKERDIPVETG 880 Query: 869 PFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ-QL 927 + + L + + L A E + E R + +I E + ++ Sbjct: 881 IIVHKILEYFSFPEDLKEA--ENEIEELFERFSGLITEDNRDKVRDISLEKLKRFIRSDA 938 Query: 928 ADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL 985 + + R + M L G I G + V + + + Sbjct: 939 YKDISSSRIIFREMPFTLKEGGRYIEGKIDIVYEKNGVIY-VGDYKTGRIKDEEKYRP 995 >UniRef50_Q04GY8 ATP-dependent helicase/deoxyribonuclease subunit B n=2 Tax=Oenococcus oeni RepID=ADDB_OENOB Length = 1161 Score = 162 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 125/1113 (11%), Positives = 284/1113 (25%), Gaps = 209/1113 (18%) Query: 14 EALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPL-PASFIWDM 72 + + + + DP +V + +A +D S + Sbjct: 15 RSELLERIYEKYRIDPQARFFYIVPNHIKF-------------SAEVDVLKKFGSLLGKN 61 Query: 73 FVRVLPEIPKESAFNKQSMSWKLMTLLPQ---LLEREDFTLLRHYLTDDS-DKRKLFQLS 128 + ++ ++W L Q + + L+ L + +K +F S Sbjct: 62 DQEA-QAFSRLQVYSLSRLAWALTKERDQKTIISNQSVSILVGQVLRELPIEKLNIFARS 120 Query: 129 SKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKAL--VEYTHQLGQPRWHR 186 ++ L W +G + + L + + + P Sbjct: 121 ARMPGFVANVA---EQLLEIWRSGLTASEILPLHQFDDRLSEKIKVLALIETKILPSLKD 177 Query: 187 ANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRY 246 +L + + + + G S L ++AL Sbjct: 178 YSLPDDALRNFATQISKIDLKNCNFYFEGFSGFTASELSLVKALISADRKT--------- 228 Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKL 306 + + +G+ Sbjct: 229 ----------------------------------QLGKKSEIVFSLTGEQQSDQ--YGE- 251 Query: 307 GRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRP 366 L F + + I S+I L + + Sbjct: 252 ----GNLFYRANQ-----LFKNEFSSARV-WIVSNIRPLSESQLNFEQSWRELETQGFTS 301 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 V + E++ + + L ++P L +DI+V+ +D Y I +F Sbjct: 302 QKRSFPQTKIVVSSDQEHEIDFVARSIRQRLVDNPKLRAKDILVLAQRLDGYKNIIPKIF 361 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 LPY + HP+ +LL + F E ++ + +L+ + + Sbjct: 362 DRYD----LPYFLDKDTRMSDHPLASLAENLLGS-SNEFAYERIMKIFRTGLLSWQLEDN 416 Query: 487 EEG-LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 + L YL ++ + + +L + Q + Sbjct: 417 FQTALDYLENYLLANNPKEKNWRQEEFQLIQISDEQDLND---DHKIDRQINALINRMRL 473 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 ++ + V + + L W ++ L + Sbjct: 474 FIIKILDDFQEKFAKVENYHQAVKTLYNWLTDQQVDQVL--------------LNQANDG 519 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTL 664 + + + + E L S + + + Sbjct: 520 DDRGQQTWKLLLSTLDEVDQLIGDKKYSQKDFLQILKDGFAAASFSGIPASLDQITVSES 579 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD---------------RSRR 709 ++ FK + + +D P Q + + D R Sbjct: 580 GIVQRNDFKALYFIDASDASLPAQTNSSSLIDDFDRLQLIDDFSKAQKPYYLQDTSRQEM 639 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 + + F +++SA + SY D + S ++ L + L ++ + Sbjct: 640 TAENFRFYSSVLSATDSVTFSYSKLR-LDGKQNELSPYLRRL--SLKNVSDLKIEKIPDL 696 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQPG-------------ERQSYAREWLPAASQAGKA 816 +S+A + +L ++ Q Q +R Y + L A + Sbjct: 697 PQSQADLVDYLGTANSSAAILSQTAQNFGEDFIDGLTDLLIKRNPYFQRILQALHYNNQP 756 Query: 817 HSEFVQPLPFTLPE--TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 + + + E + + +++++++P F Q L++ R + F ++ Sbjct: 757 VTLRPELIKKLFGEDLRLSISQIEKYYSNPYEYFLQYGLRLKKRNQ---------FTVDA 807 Query: 875 LSRYQINQQLLNAL---------------------VEQDDAERLFRRFRAAGDLPYGAFG 913 + + + Q+ A+ L F Sbjct: 808 ALSGTYYHSIFEQVINRLIGKRTDFHDLSDQELKKLSQESAQNLIELPDFQILQSDDHFR 867 Query: 914 EIFWETQCQEMQQL-----ADRVIACRQPGQS------------------MEIDLACNG- 949 + + L A+R+ R ++ LA Sbjct: 868 AVARSLTDDVLLTLKLMHRANRLNNSRPIKTEAVFGKLSSDQQREQSLSGLDFTLANGRK 927 Query: 950 VQITGWLPQVQPDGLLRW--RPSLLSVAQGMQLW--------LEHLVYCASGGNGESRLF 999 + + G + ++ L + + L+ L Y + SR+ Sbjct: 928 IYLRGKVDRIDQQDLEHIFGTIIDYKSNGKVFDFRDAYVGTELQLLTYWLALSKNSSRIG 987 Query: 1000 LRKDGEWRF-----PPLAAEQALH---YLSQLI 1024 + + G F P QAL L QLI Sbjct: 988 INQPGGAVFVQIRNKPADISQALAHQIQLDQLI 1020 >UniRef50_C4Z484 DNA helicase II / ATP-dependent DNA helicase PcrA n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z484_EUBE2 Length = 1220 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 89/897 (9%), Positives = 210/897 (23%), Gaps = 172/897 (19%) Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL------FNSD 290 HL + + G + KL R ++ + + ++ Sbjct: 364 HLALSILVKKEDGKLVYTETADKLANRFEEILIDEYQDSNQLQEVILNAVSKTRLSGENN 423 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV 350 VG+ + + + + T DN+ +Q + EN Sbjct: 424 NIYMVGDVKQSIYKFRLACPELFIEKYD-------TYGETGDNVRIELQKNFRSRENVLE 476 Query: 351 AGVNIEEFSRSDNKRPLDPLDSSITFH--------------------------------V 378 ++ + N D S+ + Sbjct: 477 CANDVFSHIMNKN-FSGIGYDESVRLNAGFPYPEYSDSNYGDEANKSTDVILISSENEEE 535 Query: 379 CHSPQREVEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVFG 427 + + E + L + ++ RDI+++ + ++ F Sbjct: 536 ATTRELEADRLAKLIEGIVSSGVNVYDADENIYRPAEYRDIVILTRSVTGWAD----TFA 591 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A DR +P S ++ +S+L++ D+ + A + Sbjct: 592 DALMDRGIPAYTDSSTGYFSVREIQVILSMLTIVDNPVQEISLAAAMMS-YFGGFTAAEL 650 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 +R L + + + + L G+ Sbjct: 651 GMVRKLGREHADKNTHNNLYEHLKAVAVLGGAGKMQ------------------------ 686 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + +L G A L +L +R + E + + D ++ A Sbjct: 687 ------ESDVKQLSGKCALFLAKLTEYRDKSSVESLYDLCWEMIYDSGYYDYVGTMPAGA 740 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP--VNICTLM 665 A + Y + L + + L V I ++ Sbjct: 741 QRQANLNVLLERAAGYGKSSYSGLFNFLRYIERLKKFDEDFAEGAASLDNENLVRIMSIH 800 Query: 666 PMRSIPFKVVCLLGMN----------------------DGVYPRQLAPLGFDLMSQKPKR 703 + + F +V L G + D V + + +R Sbjct: 801 KSKGLEFPIVILAGAHKSINFMDATAPVLVDQNLGIAVDYVDLERRTKTPTIIKGAMARR 860 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV----------------- 746 R ++ L A+ A++KL I+ + + +++ Sbjct: 861 IVRESIAEEERLLYVAMTRAREKLIITGVVKDADKTLDKYMGRAEQLAADGMLSFADSEN 920 Query: 747 ---LVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA 803 + ++ ++ + + Sbjct: 921 IKNYLDMIMPVCLMDSDKLKGSFKVMVDAGEDS---WVDAFEAGEMAGEANAVRIGELAD 977 Query: 804 REWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQ-----------RFWAHPVRAFFQMR 852 + E+V + + L+ + V+ + Sbjct: 978 ENMEAVSYPLLDELPEYVPDDNAARRMKLTVSQLKAMQADDDSEENAYMDESVKTALKKE 1037 Query: 853 LQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL----------VEQDDAERLFRRFR 902 + + E L R +++ L V+ D L Sbjct: 1038 ACDETNSIIPKFISGEEVQLAANERGSAYHRVMECLDYSVSVNLDGVKADINRMLETGKM 1097 Query: 903 AAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPD 962 + +I Q +++A+ V C + G I G + + Sbjct: 1098 NELQVKSVNPWDINTFVQSDTGRRVANAV-NCGSVRREQPFVFEYEGQLIQGIIDLYFEE 1156 Query: 963 GLLRWRPSLLSVAQGMQL----------WLEHLVYCASGGNGESRLFLRKDGEWRFP 1009 + M+ + L Y A + +++ + F Sbjct: 1157 DGEFVLV-DYKTDRVMKGEAGEKELVRRYAIQLDYYAKALTQLTGKKVKEKIIYSFA 1212 >UniRef50_C7GZ83 Putative ATP-dependent exoDNAse beta subunit n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ83_9FIRM Length = 1289 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 114/1058 (10%), Positives = 258/1058 (24%), Gaps = 200/1058 (18%) Query: 58 ANIDFPLPASF-------------IWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLE 104 A +DF +S F +L ++ + KL LP L E Sbjct: 201 ATLDFHKFSSLREFRELIKNTFSDAKKYFDSLLGKLHDADCTGFEE---KLYGKLPHLNE 257 Query: 105 REDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAW 164 + ++T D D + + + D F P +A E + E + E Sbjct: 258 PDI-----DFMTADIDDIRQY--AKTVLDDF-------PKMVASKEEKNSYEEVKEECQ- 302 Query: 165 QAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYL 224 L K + ++ E ++ + Sbjct: 303 --KLVKKIKSIIKDDLLGSI-LTVPLEKEPELMKETEAHLTMFSKIIKAVDRIGFKLKQK 359 Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG 284 + A HL C I R + ++ + E Sbjct: 360 R--NAYSFSDLEHLALKVLCMDDVAAI--------YRDRIKHIFVDEYQDSNEMQEEILH 409 Query: 285 QLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE 344 + D VG+ + + + +A++ + + +++ + Sbjct: 410 KFAK-DNLFLVGDVKQSIYRFRFAEPSLFEGRY------EAYLGTSSSGSIVDLKENYRS 462 Query: 345 LENRAVAGVNIEEF----SRSDNKRPLDPLD----SSITFHVCH------------SPQR 384 + A + + +K D + S + Sbjct: 463 KQAVIDAVNALFKDVIPKYDERHKLVAGRKDNDFIGEVKVCEAEFNKEITNDDELKSKEE 522 Query: 385 ----------------EVEVLHDRLLAMLEED---------PTLTPRDIIVMVADIDSYS 419 E ++ + A + + L DI V+ I Sbjct: 523 YKKYLKLIDTLGRDFYEGLLIGSEIKAAIGREYFDAKEGVQKKLKFSDIAVLFRSIKGRG 582 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 I+ A +P + + +L L + + ++ +L PV Sbjct: 583 KKIKL----ALELLGIPTNMQASGDILDFKEVNLLHCILKLTANFYDDLSLVTVLLSPVY 638 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 T + + +R W +E+G + G A+++ Sbjct: 639 G----FTPQDIAEIRIWGDENGYKAQPFYACFLAFSKNLCRDDDAGENGETNGNGDALKN 694 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 EL + + +R VC + F Sbjct: 695 ED----------------CELFVKARDFVNDILRFRSYGYALSLHVFIKRVCTETGIYEF 738 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV-PLSLLRDEL--AQRLDQERISQRFLA 656 + +++ E + + L L ++L + ++ + Sbjct: 739 AEALKQSRNPCGNIERYIDFAHEFERERGIATLSDLLLYIEDLYKNELAIEQEEREGENT 798 Query: 657 GPVNICTLMPMRSIPFKVVCLLGM-----------------NDGVYPRQLAPLGFDLMSQ 699 V+I T+ + + F +V + G N G++ R + G + Sbjct: 799 NAVSIMTIHRSKGLEFPMVVVAGCGSNFVKTKSASYIEFDKNHGMFMRYMGADGLVGIPH 858 Query: 700 KPKR----GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 + + D+ +F A A+ L S + S S + D + Sbjct: 859 REILHKYAEKDAEYDEAMRIFYVACTRAKDFLVFS-AVTDGKKGSIITYSSFYDVINDTL 917 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 + + ++ +E +A + + + ++ Y E ++ Sbjct: 918 VCNEEINKEKWFEYEEFDAAGLLNRIINSKY--VRAKGQEVEGKKLYLAEIPEVKNELKS 975 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFW--------------------------AHPVRAFF 849 + ++ E + + + F F Sbjct: 976 SGGLSSTKEFVSVTEFLKITDREAFMNSSTNVKAGIDENNNVQNSNTLFFDKKDGFSYFA 1035 Query: 850 ------QMRLQVNFRTEDSEIPD-TEPFILEGLSRYQINQQLLNAL---------VEQDD 893 L++N D ++ + S +L L ++ Sbjct: 1036 GNEKNENDSLRINGENFRDMYVDKSQNDEPDPASIGTAVHKLFERLSFEKMACAGEDEMT 1095 Query: 894 AERLFRRFRAAGDLPYGAFGEIFWETQC----------QEMQQLADRVIACRQPGQSMEI 943 A L + + + E + + MQ + + + + M Sbjct: 1096 AMVLNELGCIKNEFSLSDDEQRYIENKKIHEVVTFFKDEFMQNIIRKAKSIEKEKPFMMR 1155 Query: 944 DLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW 981 D G I G + + + Sbjct: 1156 DDKLKGRIIEGVIDC-FIESDDEIIVIDYKTNNIYGSY 1192 >UniRef50_C7NJY7 DNA/RNA helicase, superfamily I n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NJY7_KYTSD Length = 1119 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 106/885 (11%), Positives = 199/885 (22%), Gaps = 153/885 (17%) Query: 261 LTRQRRHSFEDRELPLFRDS---ENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL 317 R R ++ + + VG+P + +G G + S Sbjct: 262 RARSRAVLLDEFQDTTEAQLSVVRGVFAGDPTLSVTAVGDPHQSIYGFRGASARTMESF- 320 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS--IT 375 + DA + +L + NR + RP D +T Sbjct: 321 --VESFDATERHLSTS--WRNSGRVLRVANRVAEPLRERSALDLPALRPRPGTDEGPPVT 376 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 +P E L V+ + V A L Sbjct: 377 ASRFGTPADEARAGAAWLAEHWAPGELGA----AVLCRKRSQF-----PVVTEALEAAGL 427 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 PY + P + +LL + D + ++ LL P L L Sbjct: 428 PYEVVGLGGLLLVPEVADVRALLGVVDDPTRGDHLMRLLTGPAARL----GAADLVGLHA 483 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 W E RWG+ Q L +L ++ + Sbjct: 484 WRRELERRWGVRSPGDEGSAERRDHQQLAVTLLDAVL---------TPVEAGWTGPQGEA 534 Query: 556 LIAELVGHLASLLMQLNIWR-RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 + LASL + L + + Sbjct: 535 VSDLARARLASLAEAVTQCLGAQHRGVGELALVAEQALGVDVELASRTDVPPWRARAHLE 594 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD----QERISQRFLAGPVNICTLMPMRSI 670 + +A A + LS L L+ E + V + T+ + + Sbjct: 595 AFHEHVATFAEAGTREP-SLSALMGWLSAAEQHEGALEPGAVEVDPSAVQVLTVHASKGL 653 Query: 671 PFKVVCLLGMNDGVYPR----------------------QLAPLGFDLMSQK-------- 700 + V + G+ G +P G + + Sbjct: 654 EWDAVWVPGLVAGTFPSGTGTVRPEGPEWVARPATDSAWWAPASGMLPFALRGDAPSLPE 713 Query: 701 -------------------PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 + ++R L A+ A++ L++S + Sbjct: 714 WSLPADPDKADFETAMKDFARANGERGLQEERRLAYVAVTRARRLLHLSSAVWGTSA-AP 772 Query: 742 RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ------ 795 S + E++D ++ E+ D +++ Sbjct: 773 TPTSDFLLEVLDDCAPGTWVEMPPTDPVPENPVTATPRTALWPRPEAEDLEHHAHAAAAA 832 Query: 796 ---------------PGERQSYAREWLPAASQAGK---AHSEFVQPLPFTLPETVPLETL 837 +RE L Q + A + V +L Sbjct: 833 EVGLALETAPGSEPGWTGLAEDSREHLLRFRQDVRLLLAERDAADQPDIEPLRHVSTSSL 892 Query: 838 QRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL------------ 885 P + L T + + +L Sbjct: 893 VALARDPG---ARRFLARPVPTPPARAARQGTDFHAWVESQWAPARLFDVPDLPQESQGE 949 Query: 886 -NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR-----VIACRQPGQ 939 +A E+D E L ++++ + Sbjct: 950 WDAHEERDAQEERAAPGAPQDGLALDGPRLRTRAPGEADLRRFQEHFVASEWSGRTPTWV 1009 Query: 940 SMEIDLACNGVQITGWLPQVQ------PDGLLRWRPSLLSVAQGM----------QLWLE 983 + + G+ + G + D L W + QL Sbjct: 1010 ELPLQTNVAGLTVRGRADAIFPATRAERDAGLEWVVVDWKTSSSPREAEVGAAAVQLACY 1069 Query: 984 HLVYCASGGNGESRL----FLRKDGEWRFPPLAAEQALHYLSQLI 1024 + A G + + F DG P L + L L +L+ Sbjct: 1070 RQAFAAWRGIDPATVGGAFFHAADGVTVRPELPDGERLEQLVRLL 1114 >UniRef50_B2UU61 Rep helicase, single-stranded DNA-dependent ATPase n=16 Tax=Helicobacter RepID=B2UU61_HELPS Length = 676 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 45/500 (9%), Positives = 131/500 (26%), Gaps = 51/500 (10%) Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQEL 323 + ++ + + VG+ + + G D + Sbjct: 206 YKEVLCDEFQDTNPLQESILDAINPP-SLFCVGDYDQSIYAFNGADIS----------II 254 Query: 324 DAFVDVTPDNLLHNIQSDILELENRA-VAGVNIEEFSRSDNKRPL---DPLDSSITFHVC 379 F + + + + + +A I+ R K + Sbjct: 255 SNFTQKYKNAQVFTLTKNYRSSKEILDLANQVIQHNERIYPKNLEVVKSGHFNKPALLNY 314 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 + + + + R++ +++ V+ + S +A +P Sbjct: 315 NDNIAQCQDIAKRIVMRK------DFKEVAVIFRNNAS-----ADQLEAALRSHNVPSKR 363 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 + + + + +L + + +L ++ T + + + Sbjct: 364 KGSASFFESKEVALALDICALIFNPKDIMAAIHVLSH--ISDIGSNTAKDIHEALMLLGN 421 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 ++ + N + T + Sbjct: 422 GDLKLALTHPNKEAKIYTKKKEITSMGLFEEIFALENSSRFNSVIDKAFHSHPVLMHPKI 481 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAI 619 + L ++ + + + + + + + Sbjct: 482 SLNGAKMLSDFFILYTKA--PTHSPSALIKHILESVFFQTFKTRLLKERSKNKDGSYNEF 539 Query: 620 IAEGLGAQYGDAVPLSLLR----DELAQRLDQERISQRFLA--GPVNICTLMPMRSIPFK 673 ++ + + L L + L+ I VN+ ++ + + FK Sbjct: 540 KKLQAQKRFNEKMDLLSSLAKNYQNLGRFLNGTLIGSSEATQGEGVNLLSVHASKGLEFK 599 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIG 733 V ++ + +G +P +++R LF A+ A++ L++SY Sbjct: 600 DVYIIDLMEGRFPN------------HKLMNTGGGIEEERRLFYVAITRAKENLWLSYAK 647 Query: 734 RSIQDN---SERFPSVLVQE 750 +++N E PSV + E Sbjct: 648 NELRENAKPKEHKPSVFLYE 667 >UniRef50_C5NXT8 Putative uncharacterized protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXT8_9BACL Length = 1281 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 108/982 (10%), Positives = 258/982 (26%), Gaps = 166/982 (16%) Query: 32 PEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSM 91 ++L + +M L KFG NID +S + ++ + S Sbjct: 30 KIIVLTPEQNSFNFEKM-LCDKFGGTFNIDVMNFSSLTRKLSKQLGMDN--LSRLGDNIK 86 Query: 92 SWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWET 151 + L ++F L++ L D ++ + + +Y V + L ++ Sbjct: 87 PFYFYKAAKNLESSDNF-LVKRILQD----VNFIEVVEEIINELKEYKVSI-NVLEEYLE 140 Query: 152 GHLVEGLGEAQAWQAPLW------KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPP 205 + +A L + L E + LY +I+ + Sbjct: 141 KDTNLDSSHKEKLEAILEIYVEYSRLLREQSSFDKVDYITELLLYLEYIDLSDYI----- 195 Query: 206 GLPSRVFICGISALPPVYLQALQALGKHIE-IHLLFTNPCRYYWGDIKDPAYLAKLLTRQ 264 ++ + L + + + + + Y+ L Sbjct: 196 -----FYVDAYYNFTAQEYYYIGKLAEKSKKLIISVISDANRYFN--------FDLAQLV 242 Query: 265 RRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWG---KLGRDYIYLLSDLESSQ 321 + + E + S+ + + ++AS K +D + + + Sbjct: 243 QGYELEKMKYNDLYLSDLYSKEKYKLDIFRKSHEIVASMNEIVKSNKDVNFSVVAFVKKE 302 Query: 322 ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD--PLDSSITFHVC 379 E++ DN + + ++LE GV+ + + K +D SI Sbjct: 303 EINTLKFKIKDNKVE--EYEVLETHRGRFNGVSNDILADKYYKNFTAQYEIDDSIEIMCA 360 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 + + EV+ + ++ + + + +I ++ D +Y ++ + D L + Sbjct: 361 KNKELEVKQVAREIVKLKHNN--INQNEIAILYRD-STYENYL-----NIFKDYNLDVHL 412 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR-------- 491 +H +++ L + RF +L LL + ++ + Sbjct: 413 DKNIETSNHRLVKFIQETLYFDEDRF-KTRLLNLLKTRLTNFENIYRQKAISHVLLGDLN 471 Query: 492 ----YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM-------LLGYAMESA 540 L + + E D L G++ + L ++ L E Sbjct: 472 IDEKQLEKDIAELDENMIKDKFLASNLVNNIGGKYKYSDLLEKVRVVSIDDLENILNEKL 531 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG---------LAQERPLEEWLPVC 591 +L L L L +R +++ + V Sbjct: 532 VNMHSDILKDYFIEKTTKYTTEQLEICRQVLLELIDKVSDVSAKNNLQAKRYIKKLVDVF 591 Query: 592 RDMLNAFFLPDAETEAA----------MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 +L + E + ++ I + + Sbjct: 592 NHCKIKMYLDKEDGEYDNIEELKIDSIDRQVYKKILEYINDINENFGSEKFEYKKFVTLF 651 Query: 642 AQRLDQERISQRFL-AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 L + + + T+ + KVV +LG N V P + D ++ Sbjct: 652 NTGLTSIKYRSIPEINNSIIMSTMDLAKVENKKVVFVLGFNKDVLPVSKSSGLIDDKDKE 711 Query: 701 P--------KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 + D+ ++ A+ AQ+K YISY E F S + + Sbjct: 712 RLISDNIFLSPTKEAALIDEEFVAYIAMTRAQEKTYISYSLLDKSF-KENFASPYLNTVR 770 Query: 753 DYIGQSH---------------------------------------YLPGDEALNCDESE 773 + + + + Sbjct: 771 SLFPELEEKQTSKILEFSIADYNYYLENISEIVSTKEFNYLFAKIYRRFMEVKDSKTKEV 830 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP 833 + + + + + ++ + + Sbjct: 831 EVLVELMIKFLEHYQLTSVHESYENYEVLDELNDRVFFTNDTSIKNYLSKIIRDYRFQLS 890 Query: 834 LETLQRFW-------------------AHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 E ++ F +P + F + L + + ++ Sbjct: 891 SEYIEEFLEIKKDSFSKFSISKISDFERNPYQFFVKRVLGIEEERDID---------IDN 941 Query: 875 LSRYQINQQLL-NALVEQDDAE 895 L + ++ + AE Sbjct: 942 LVTGKFFHAVMSEKRITNFIAE 963 >UniRef50_Q2RLV0 UvrD/REP helicase n=2 Tax=cellular organisms RepID=Q2RLV0_MOOTA Length = 1232 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 59/546 (10%), Positives = 129/546 (23%), Gaps = 128/546 (23%) Query: 264 QRRHSFEDRELPLFRDSEN-AGQLFNSDGEQDVGNPLLASWGKLGRDYI---YLLSDLES 319 ++ + + +G+P A +G G DY LL D + Sbjct: 752 FTHLLVDEFQDVNAVQYRLVKKWTGDGKNLFVIGDPDQAIYGFRGADYRFFGQLLEDFPA 811 Query: 320 SQELDAFVDVTPDNLLHNIQSDIL------ELENRA-----------VAGVNIEEFSRSD 362 ++ + ++ + ++ +L A + S Sbjct: 812 ARVFRLTRNYRSTPVILRAAAAVVAHNPGGDLRAAAGGELAATTASTTSPAAGPGISGGG 871 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML----------------------EED 400 P I + + ++ D Sbjct: 872 GLVATRPEGGPILHLEAPGETAAGIAIVREIGRLVGGATMLQAHGQDGGTWREGPETGSD 931 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 DI V+ LPY I R + + ++ Sbjct: 932 GAYGFSDIAVLCRTGHQL-----KALEECFLKEGLPYRIVGRESFLEERPVREALAFCRC 986 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 + +L L G+ ++ ++ A Sbjct: 987 LVNPEDDFHLLKYLGSG-------------------------SAGVGEEVAIQVRETALK 1021 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 + + + R L G L + + L +R L + Sbjct: 1022 RGVPAWLVIRELAGE----------------------------LQNFINSLEAYRAALDK 1053 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 + P + L D + + + + +++ + A G Sbjct: 1054 QSP----AELLARWAGEHGLLDEPSISRLLRVAERFPDLSAFLRGVVLAG---------- 1099 Query: 641 LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK 700 + + + V + TL + + F V + G+ DG+ P + P Sbjct: 1100 --EADHERPGNNGASPEVVTLMTLHAAKGLEFPAVFIAGVEDGLLPLKEGPGVTLS---- 1153 Query: 701 PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--ERFPSVLVQELIDYIGQS 758 ++R LF + A++ L + R + PS + E+ Sbjct: 1154 -----PEEMAEERRLFYVGMTRARELLVLVSSRRRELRGTVVPAEPSPFLGEIPADCLVR 1208 Query: 759 HYLPGD 764 Sbjct: 1209 ETWDAR 1214 >UniRef50_B5EW84 ATP-dependent DNA helicase Rep n=1 Tax=Vibrio fischeri MJ11 RepID=B5EW84_VIBFM Length = 762 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 55/515 (10%), Positives = 146/515 (28%), Gaps = 44/515 (8%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASWGKLGRDY 310 K+ KL R + ++ + L + G+ A + G + Sbjct: 247 KEKDIRLKLKQRYQFFEVDEFQDTNVCQYRFLLALVGDGKNLAMFGDIKQAIYSFRGSNC 306 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE----FSRSDNKRP 366 L + Q + + N+ + N AG I + S++ Sbjct: 307 Y--LMANINKQ--------FSNLKITNLPDNFRSTHNVVAAGNAIADCMKIQLVSEHMIG 356 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 + +E + +++LA+ + + P++I ++ Sbjct: 357 HKESQVMPFVTCYENEDQEAHNIVNKILALKAD--GIAPQNIGILYRFNKLGQNM----- 409 Query: 427 GSAPADRYLPYAISD-RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 + R + Y + P + + L L + + + + F + Sbjct: 410 ENYLISRGVSYRRIGNDKGLYEEPDIRDIVIYLHLIFNPYSIKAIRCFFAS---FIEFGV 466 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 T E L + G + + + + + + + L+R+L S Sbjct: 467 TTEALNSAIKSFQGRGDKRINNHQLLSFIVERGICKPSTKEHLSRVLKIIMHCSGLSSRI 526 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE--RPLEEWLPVCRDMLNAFFLPDA 603 + S + ++E + + F A Sbjct: 527 TSFDSYCRSVNEQYTNMPSDHCKAVEKRLQEQFWGAVRDFVKELSTIYVEQYKYMFYSQA 586 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL---AQRLDQERISQRFLAGPVN 660 + + + + + A Y + + + L + + + Sbjct: 587 DQQKRLKMSRELATKHYHLIFNACYDEELSETNLTQYICTRPLLDKVTKKDDEENTTDIE 646 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + T+ + + + + ++G ++ + + + + +++ LF AL Sbjct: 647 LMTIHASKGLEKEAIFIIGCSEESWW-----------KESDIKAGTDKYEEELRLFYVAL 695 Query: 721 ISAQQKLYISYIGRSIQDNSERF--PSVLVQELID 753 A + L+ +Y N+E+ P + L + Sbjct: 696 TRAIEHLFFTYSATRSFRNTEQPCNPLRFLFLLKN 730 >UniRef50_A3CVM7 UvrD/REP helicase n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CVM7_METMJ Length = 1080 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 95/883 (10%), Positives = 204/883 (23%), Gaps = 194/883 (21%) Query: 210 RVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYY-----WGDIKDPAYLAKLLT-- 262 + + L L+ LG + L + + D+ + + Sbjct: 296 SLTLDAADPFTRATLDFLRDLGVVFKAFLDSVEAEKRRMNALDFDDLVNRTHRLFRDRGD 355 Query: 263 --------RQRRHSFEDRELPLFRDSENAG-QLFNSDGEQDVGNPLLASWGKLGRDY--- 310 R R ++ + L +S VG+P + + D Sbjct: 356 IVETHFRSRFRFILVDEFQDTDPVQIAIIRTLLGDSANLFVVGDPKQSIYLFREADVTQF 415 Query: 311 ---IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 L+ + + V+ + + + EF Sbjct: 416 SHTRDLIERDLGGETVALDVNFRSTPEVVGFTNAVFSA--LMAEAGRPWEFLYEPLHAFR 473 Query: 368 DPLDSSITFH-------VCHSPQREVEVLHDRLLAMLEEDP----------TLTPRDIIV 410 S+ + E E+ ++ +++E D+ V Sbjct: 474 RDDAGSVELLLCQKIRDRAAGRRAEAEMAARKIRSLVERGEKRVSRDGEVRPAGYGDVAV 533 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 ++ + + + A A +PY + + ++L + + Sbjct: 534 LLERRTNLAYY-----EWALARYGVPYHVHAGLGFYERQEVYDLYNILRFLANNLDDAAL 588 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 +L P Sbjct: 589 YGVLRSPYFGFS----------------------------------------------DA 602 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 L A W+ + E + L+ L + RR + Sbjct: 603 RLFHIARAPGASLWERLQAAAEPAAATLREWLSLSRRLPPARLLRR-------------I 649 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 + ++ A+ + D L+ EL + +D Sbjct: 650 VDESGIFVVFGGMAGGEQAAANVEKLIALARDA------DCSTLAGFVAELGRSIDAGDR 703 Query: 651 SQRFL-----AGPVNICTLMPMRSIPFKVVCLLGMNDG--------------------VY 685 A V+I T+ + + F VV + + + Sbjct: 704 EGDAPLDLASADSVSIMTVHAAKGLEFPVVVVPDLAETPRSGGGTIMVEDGLLLGVSIPN 763 Query: 686 PRQLAPLGFDLMSQKPKRGDRSRRDDDR-YLFLEALISAQQKLYISY-----IGRSIQDN 739 P + + K R + + +R LF A+ A+ L + + S++D Sbjct: 764 PANDHEREETPVLRLLKDEYRQKEEAERKRLFYVAVTRAEDHLILCGEMPVAVPESLRDA 823 Query: 740 SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGER 799 R ++ L + + ++ +T +P D Q Sbjct: 824 RTRMA---------WLAHCLGLCDEVYARGEAVLGTLRIPITLDPAAIPVDVQE------ 868 Query: 800 QSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRT 859 LP A P L+ + P + RL V Sbjct: 869 --TVPVCLPVPDDVPAAPVPAGIPSNGKKERVYSASELEAYLRGP----AESRLPVFAAG 922 Query: 860 EDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWET 919 E + L+R + ++ R G P GA Sbjct: 923 E------------DALTRGLVVHEVFRGR-------DPAAVLRRYGLDPAGAVEYQEL-Y 962 Query: 920 QCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVA---- 975 L ++ + + NG G + ++ W Sbjct: 963 VRFLASPLMRGIVR---DHREVPFSARVNGFAFRGVIDRLVQRVNGTWMLIDYKTGTPGD 1019 Query: 976 ---QGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQ 1015 +Q+ + H + D + R+ + ++ Sbjct: 1020 AGEYAIQMAVYHRAAAQILSAPVTPYLYFVDAD-RWAEIEVDE 1061 >UniRef50_A5KSD5 UvrD/REP helicase n=2 Tax=candidate division TM7 RepID=A5KSD5_9BACT Length = 933 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 76/787 (9%), Positives = 174/787 (22%), Gaps = 91/787 (11%) Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPA----------YLAKLLTRQRRHSFEDRELPL 276 L+AL +L+ Y D L + + ++ + Sbjct: 97 LRALAHVYYEYLVAMQANTLYDFDDMILRVVHALEVFGELRFTLQEQYQYILVDEFQDTN 156 Query: 277 FRDSENAGQLFNSD------GEQDVGNPLLASWGKLGRDYIYLL---SDLESSQELDAFV 327 L ++ VG+ A + G + +L + + Sbjct: 157 GAQLRILLNLTENEVNNGRPNILIVGDDDQAIYSFQGAEISNILTFQHRFRNPAIITLAD 216 Query: 328 DVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVE 387 + + ++ + +P+ + + E Sbjct: 217 NYRSAPAILENARKVITQGQDRLETHMKSLDKTLTPHKPVTKS--RVELAELPTKNHEYL 274 Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 + +++ L D +I V+ + + + R Sbjct: 275 WIVNQIKQRL--DAGQNAHEIAVLTRTHSEMTHLLP-----YFHHADIEVNYERRDNVLD 327 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID 507 P + L +P L + L + + R Sbjct: 328 LPPIAMLEQLARALVDIAEQRFDDLNGRLPELLSHPSWRLPPLTLWKLGLEAHNSRRHWV 387 Query: 508 DDNVRELELPATGQHTWRFGLTRML---LGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 + + R + L A++ G + +P ++ Sbjct: 388 EIMLETKGPLKDIAEWLIVAAHRSMTAPLEEALDLLLGTHERQVPDNDEVEPTTRPSHQT 447 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 + L + + L + + L + + I Sbjct: 448 EGFISPLRNHFFPHDALEKRPHLYILYLNALRRIRFKMRDYQPERLLHLKDFVEFIDLHR 507 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 A + + T + + F+ V ++ + Sbjct: 508 KTHTPIT----------------SPRPASEDAEGICLMTAHKSKGLEFETVFVVNVTHST 551 Query: 685 YPR-QLAPLGFDLMSQKPKRGDRSRRDDDR-YLFLEALISAQQKLYISYIGRSIQDNSER 742 + A DD+R LF + A+++L ISY + + Sbjct: 552 WGSGARARGRMIPYPANLPLAPAGETDDERLRLFFVXMTRAKRELIISYALQDLV-GRPT 610 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 + + + + H +N S Sbjct: 611 LRAEFL-----------ATDNWHVIQPALPDTPESQKEAAEHQWY----ENVLSVSDGSL 655 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 + P + + + + T P Q L+ F Sbjct: 656 DKLLKPTLERYKLSATHLNNFIDVTSGG-------------PQAFLLQNLLR--FPQARL 700 Query: 863 EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRF------RAAGDLPYGAFGEIF 916 I + L R NA + E + F + +L + F + Sbjct: 701 PNAAFGLAIHKALQR---AHAHFNATGSRRPVEDILHDFETALGEQRLSNLDHEHFMQRG 757 Query: 917 WETQCQEMQQLADRVIACRQPGQSM-EIDLACNGVQITGWLP-QVQPDGLLRWRPSLLSV 974 + + + P +S + G +TG L + D Sbjct: 758 SDVLQTFLAARYESFQESAIPERSFGSQGVLIEGAALTGVLDLMLIDDANKTITVVDYKT 817 Query: 975 AQGMQLW 981 + + W Sbjct: 818 GKAARRW 824 >UniRef50_C1XZD7 DNA/RNA helicase, superfamily I n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XZD7_9DEIN Length = 646 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 70/518 (13%), Positives = 154/518 (29%), Gaps = 82/518 (15%) Query: 266 RHSFEDRELPLFRDSENAGQLFNSDG--EQDVGNPLLASWGKLGRDYIYLLSDLESSQEL 323 ++ + E + VG+P + +G G +Y +L Sbjct: 204 YLMVDEFQDTNGVQLELVRAIAPGTSPNLMVVGDPDRSIYGWRGANYRTILE-------- 255 Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD---PLDSSITFHVCH 380 F P ++ + ++ I + + + P V Sbjct: 256 --FRQHYPGAAVYGLYTNYRSQAGVVEVANRIIAQNATRKPEMQEAHLPQSEEPFLLVAK 313 Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 + E + + + ++ V++ + F+ A R +PY + Sbjct: 314 NRWEEAHFVAQAVE--FYRGQGIALEEMAVLMR-----ANFLSRDLEQALRLRGIPYQFT 366 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 R+ ++ +++L + + S V AL + + + Sbjct: 367 GGRSFFERREIQLGMAVLKVLANPKDSLAVAAL----------------VEEMVEGAGPL 410 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 GI+ ++ L ++ R A E D+ + L AE Sbjct: 411 GIQKVLEAAKAANLSPLEAFRNPAMVKGLRGKEVQAEAMRLAEVLQ----DQVARLAAEA 466 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 + A L L+ E WL E + + ++ Sbjct: 467 PEYHALLKETLDRL--------GFEAWLDRL-----------GEESEQVYSRKANLDRLL 507 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 Q + P + L+D + L + + V++ T+ + + F+VV ++G+ Sbjct: 508 QGMQEWQ--EVNPGAPLQDLVGTLLLEAGDTPAEEGQGVHLMTVHASKGMEFRVVFVIGL 565 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 N+G++P A F +++R L A+ A++ L++SY Sbjct: 566 NEGLFPLSKASSSF------------EGLEEERRLMYVAVTRAKEVLHLSYAADG----- 608 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 S QE + + G ++ + Sbjct: 609 --VVSRFAQEARVPVEEYDPRLGWSGRQNQQALKALLE 644 >UniRef50_C1A6C2 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6C2_GEMAT Length = 702 Score = 160 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 58/505 (11%), Positives = 132/505 (26%), Gaps = 88/505 (17%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYI 311 + P ++ ++ + S L + VG+ + + G Sbjct: 231 QAPPIAEQIRALYDHVLVDEYQDTNPLQSRILRGLCTNGHITVVGDDAQSIYAFRGATIR 290 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRSDNKRPLD 368 +L F P + ++ + + + + S Sbjct: 291 NILD----------FPHEFPGTRIVTLEQNYRSTPHILDSTNVLISRSMERYSKQLFTAR 340 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + + DRLL + E+ R++ V+ + ++ A Sbjct: 341 TDGERPWLVTVRDESAQTAFVVDRLLELHEQ--GTPLREMAVLFR-----AGYLSADLEI 393 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 ++R +PY ++ ++ + L ++ +L + + Sbjct: 394 ELSNRRIPYEKWGGLKFLEAAHIKDILAFVRLLENPRDEVSWYR-----LLRLLPGVGDA 448 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 R + +N+ G W + Sbjct: 449 TARNAIELLNQHG------------------------------------------WAPMA 466 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + A+ + L + E + + R + + + Sbjct: 467 IGAVKAPARAKPGLLAMAALFDGMGRVERADRPHSPSETIRLVRQLYDPLLNATYDDAPP 526 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 Q + I A L+ L E I + + T+ + Sbjct: 527 RLADLDQLEIIAAGYT----DRTEFLAALALEPPSSTQDLAIGSTDEDDALILSTVHSAK 582 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + V ++ +DGV+P D ++ +++R L AL A+ LY Sbjct: 583 GKEWDAVFVIHASDGVFP------------MARAAVDDAQIEEERRLLYVALTRARNDLY 630 Query: 729 I-----SYIGRSIQDNSERFPSVLV 748 + SY R+ D S S + Sbjct: 631 VVYPLHSYATRTGADFSYTQLSRFL 655 >UniRef50_C8Q3Z5 UvrD/REP helicase n=2 Tax=Proteobacteria RepID=C8Q3Z5_9ENTR Length = 1144 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 97/917 (10%), Positives = 218/917 (23%), Gaps = 161/917 (17%) Query: 143 PDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATT 202 P L + E L+E ++ L + + + + ++ Sbjct: 297 PRMLDRTEAVELLEHEFPKLGL--VHYRNLYDPSRIIADFLAGISRAKDEVVDASTYLKL 354 Query: 203 CPPGLPSRVFICGISAL-----PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYL 257 S V I+ A + L + E ++ A Sbjct: 355 AQAMRDSAVENDAITDAEKAIEVAKVYAAYENLKQQSECIDFGDLVSLPVKLLEENEAIR 414 Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSD 316 + + + ++ + + + + VG+ + + G + Sbjct: 415 SHIQSTYEHVLVDEYQDVNHSSVRLLKAICGNGNNLWAVGDAKQSIYRFRGASSFNMTRF 474 Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF-----SRSDNKRPLDPLD 371 + P + + ++ + + + S + Sbjct: 475 GN---------EDFPGGVRYRLKMNYRSVPEIVSTFSRFAVGMAVGDADSWLRPNRGSNA 525 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 ++ L D + M RD V+ + S G Sbjct: 526 CKPELRFVGQGVQQSPALADAIQEM--RGAGYPYRDQAVLCTGNEKLSEI-----GQQLE 578 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +P + P ++ ++SLLSL R V F ++ E + Sbjct: 579 RLGIPVLFLG--SVFERPEIKDWLSLLSLLVDRRAMGLVRM-----ACLPEFTMSLEDVG 631 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 + + E + W ++ + + + ++ Sbjct: 632 NILACLRE---------------------EDDWGDWRDKVNQFQISANGRTALKRLIKTL 670 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 + LA++L+ LA + FL + Sbjct: 671 DGFKGDTSPWTVLATVLLDRTRIVARLATSSGCSDRSQCIATWQLLNFLRVQPSTGEGLF 730 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 I + I D L ++ + V + T+ + + Sbjct: 731 ITRTLDRIRRLVRLGDDRDLRQLPVVAQSI---------------DAVRLMTIHGSKGLE 775 Query: 672 FKVVCLLGMNDGVYP---RQLAPLGFDLMSQKPKRGDRSRR-----DDDRYLFLEALISA 723 F VV + GMN P ++ A D M K R + + LF AL A Sbjct: 776 FPVVHVPGMNADTLPGYTQKQACPPPDGMIAGSKANAREQFSLEHKAERECLFYVALSRA 835 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 + +L++ Y S R S + + + Q + P + ES Sbjct: 836 RDQLFL-YAALRNAAGSTRRKSEYLDRIEPNLIQRNIEPHHPVIEPPESL---------- 884 Query: 784 HTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAH 843 + + + + + Sbjct: 885 -------------------------------------PIDWVADGEFKLSGDQVSLYESC 907 Query: 844 PVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER------- 896 P R F+ LQ+ R + + + + Sbjct: 908 PRRFFYTHVLQIGGRRSPTP--------------FSKMHDAVRKVFRDMIEAESTIITNI 953 Query: 897 ---LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQIT 953 + + + G +G +++ +M + + + P + + + IT Sbjct: 954 EGSVEQALKVEGLAEHGY--APEFKSLALDMVRYFNSIREGHAPETPSVLTMKFGDIPIT 1011 Query: 954 GWLPQVQPDGLLRWRPSLLSVAQGMQ-------LWLEHLVYCASGGNGESRLFLRKDGEW 1006 V R + L + + L D Sbjct: 1012 VQPDDVLIYSDGRRTFRRVRTGHKRDKEESDLGAAAFILAARRAFPDAIVELVHLSDKTV 1071 Query: 1007 RFPPLAAEQALHYLSQL 1023 L+ + + +L Sbjct: 1072 TPIDLSTKVLHNRQEKL 1088 >UniRef50_UPI0000F51769 UvrD/REP helicase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI0000F51769 Length = 889 Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats. Identities = 52/564 (9%), Positives = 151/564 (26%), Gaps = 84/564 (14%) Query: 209 SRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHS 268 + I+ L P +++ L + + + + + + ++ + Sbjct: 162 EEIPRDNINELNPNFIKILDRYENSMN-KNKIISFSQLIYFAVNKIKDNKEKISNIKYLL 220 Query: 269 FEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVD 328 ++ + + Q+ + VG+P + + G +Y Y + F + Sbjct: 221 VDEYQDINKVQYDLIKQIGENASIFAVGDPRQSIYEWRGSNYKYF----------EEFSN 270 Query: 329 VTPDNLLHNIQSDILELENRAVAGVNIEE----FSRSDNKRPLDPLDSSITFHVCHSPQR 384 + + + ++ I + + P+ + + R Sbjct: 271 DFSNAEEFTLNENRRSTKSIVNISNTIVKQFPDNPGYPDMVPVREKSGDVIATEYENASR 330 Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E E + +++ +++D V++ +++ I + +PY ++ Sbjct: 331 EAEGIANKIKCEIKKDK--KYSKFAVLLRSVNTSGDLII----DEFKKQKIPYLVAGNAG 384 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLA-LLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 + A + L D +L + E + L + + Sbjct: 385 LFKRGEVLALAQIFCWFADDGFWYVGRYKLTDNELLEKAIENWETTVNKLNNNIKD---- 440 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 D ++++ + + A++ ++L + Sbjct: 441 ---DLNHIKSSLNSYGDYRVLYQDVLKRFDYSALDQDNDLDNAILA-------------N 484 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 + L + + + + +D+ I Sbjct: 485 IGRFTKVLGDYEQSVRYGGGNKNIQKEMKDLCW----------------------FINTY 522 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 Y + +I V + T+ + + ++ V L + + Sbjct: 523 ANHSY-----------------QEAKIEDLSKDNVVTVSTIHQSKGLEWQTVFLPSIINK 565 Query: 684 VYPRQLAPLGFDLMSQKPKRGDR--SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 +P ++ Q R + D + LF A+ A+ +S + Sbjct: 566 RFPSLTHFKSNLMIDQSLYEYSRYETSLDSEYRLFYVAVTRAKNYCLMSNFSAYPT-GRK 624 Query: 742 RFPSVLVQELIDYIGQSHYLPGDE 765 S ++ + Y E Sbjct: 625 TSESEFMRIIDKYEPVEDIEIETE 648 >UniRef50_A6CGD0 ATP-dependent DNA helicase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CGD0_9PLAN Length = 693 Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats. Identities = 50/490 (10%), Positives = 122/490 (24%), Gaps = 95/490 (19%) Query: 260 LLTRQRRHSFEDRELPLFRD-SENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLE 318 L + ++ + + +G VG+ + + +L Sbjct: 231 LRGQFEAVLVDEYQDTNILQSGILKNICPDGEGLTVVGDDAQSIYSFRAATVRNILD--- 287 Query: 319 SSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSIT 375 F + ++ + + A I N + Sbjct: 288 -------FPQEYEGTTVVTLEENYRSTQPILQATNQIIDEAHERYEKNLWSSKISGEAPC 340 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 C + + + ++L + + V+ + A R + Sbjct: 341 LVDCSDNNEQADFVVQQVLE--HREAGIPLNQQAVLFR-----ASHHSLSLEVELARRNI 393 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 Y ++ ++ L L ++ + L + L I ++ + L Sbjct: 394 AYHKYGGLKFIETAHVKDLMAYLRLAENPRDAVSGLRV-----LTLLPGIGQKKAQQLIN 448 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + ES R+ + Sbjct: 449 LLAESQFRFDAWSEFKP------------------------------------------- 465 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 A V H + + +++R + + R + + + +Q Sbjct: 466 -PAATVEHWPLFVRLMKNLSSPQSEKRGISAEVHQVRTFYSPLLDQQYDNATSRQRDLEQ 524 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDEL-----AQRLDQERISQRFLAGPVNICTLMPMRSI 670 + + + +E+ + D S + + T+ + + Sbjct: 525 LEQVASRFSSRMS--------FLEEITLDPPSSTQDVSAASGADDDDFLVLSTIHSSKGL 576 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 + V +L DG P +++ D++R LF AL A+ LY+ Sbjct: 577 EWDAVYVLQAADGSIPSEMSLES------------EDEIDEERRLFYVALTRAKNWLYVC 624 Query: 731 YIGRSIQDNS 740 + R N Sbjct: 625 FPHRQYFQNR 634 >UniRef50_C8RQU9 ATP-dependent DNA helicase II n=2 Tax=Corynebacterium jeikeium RepID=C8RQU9_CORJE Length = 1136 Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats. Identities = 89/869 (10%), Positives = 212/869 (24%), Gaps = 102/869 (11%) Query: 179 LGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL 238 A + + L G+ P++ A + ++ ++ Sbjct: 189 PALSYAGFAQQLRDLLLRATERGLSAQQLQQL----GVEHDRPMWEAAGRFQQEYQQVQR 244 Query: 239 LFT----NPCRYYWGDIKD------PAYLAKLLTRQRRHSFEDRELPLFRDSENAG-QLF 287 L N + + + + + +D + + Sbjct: 245 LSRSESLNASELLHATLAAFEKPEGEQLVEQQREKVKLLLVDDAHNLDPASARLIESFMV 304 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDL--ESSQELDAFVDVTPDNLLHNIQSDILEL 345 G+P + G D L + + + + Sbjct: 305 PGTRTLIAGDPDQCVFHFRGAD-EAFLDSYSQDPDHRVVLSASYRLTPPAAQSVNALRRH 363 Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 + V + D ++ + + E + D + + + Sbjct: 364 LGAQPSRVELRSADSGDFTSGGSTGAETVQVTITPTETAERLKIVDVVRRAHI-EQQVAW 422 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 DI V+V S + +P + + L + L + R Sbjct: 423 DDIAVIVRGTGSIARV-----RRTLMAYGVPVKVDPTSVVLAEQPLARMLLLAAEASYRT 477 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 ++ + + + + + S G L A Sbjct: 478 LTVAEMHSVLEGSVGGADPVMVRRVHRAVALAIRSAQMAGQVAGQAAGQTLRAHEDGRPF 537 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 + + E++ ++++L + + Sbjct: 538 QAADYVTELLNHPGDP---ANQWITSHCGPREKEVIQRVSTVLEAGRQAWKNNQGTEMVL 594 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL----GAQYGDAVPLSLLRDEL 641 + + + + + A+++ A+ + + L Sbjct: 595 WKIWQATKLDMHLRAQALKGGSLGAQADADLDAVMSLFDILGDFAERNPHAQMESFVENL 654 Query: 642 AQRL--DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 + R + AG V I +KVV + G+ +G +P G + Sbjct: 655 RAQKVPTGGRDQRGVRAGAVEILPAHAAAGRQWKVVAIAGVQEGEWPTGPTVGGLFGQLE 714 Query: 700 KPKRGDR------------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 DR +++R LFL AL A ++++ + S + PS Sbjct: 715 LVDLLDRGIDPSVPVARINDAIEEERRLFLLALSRATDSVHVTCVRNSG--DEALVPSRF 772 Query: 748 VQEL-------------------IDYIGQSHYLPGDEALNCDESEARVKAHLT--CLHTR 786 + E+ +G+ G AL + + A L Sbjct: 773 IAEMGVEPTELATADEAEGAEEAETSVGRKVSGSGAGALPRVLAIDSLLAELRDAVTDPN 832 Query: 787 MPFDPQNYQPGERQSYAREWLPAASQ---AGKAHSEFVQPLPFTLPETVPLETLQRFWAH 843 P + AR + A+ G A + + L+ + Sbjct: 833 RPGHERRAAARNLAKMARAGVYGAAPEDWWGTAEPSTDARVLAGDKIRLSPSKLESWNTC 892 Query: 844 PVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRA 903 +RAF V+ TE + + +V+ + + + Sbjct: 893 ALRAFLDSNGGVSESTE-------------AMRVGIFIHAIAEQIVQGMELDE--AQLAV 937 Query: 904 AGDLPYGAFGEIFWETQ-CQEMQQLADRVIACRQPGQSMEIDLACN-------------- 948 LP+ G + TQ + + +++ + E +L Sbjct: 938 REILPHVLDGPAWKNTQTVERWEGGVNKLHGFIAGYRDKEFELETERTLRARVGQTPDGV 997 Query: 949 GVQITGWLPQVQPDG-LLRWRPSLLSVAQ 976 V ++G + + + + Sbjct: 998 EVTLSGRADLLATNPEDGLTKVIDFKTGK 1026 >UniRef50_B2IQB2 DNA-dependent ATPase I and helicase II n=4 Tax=Bacilli RepID=B2IQB2_STRPS Length = 1334 Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats. Identities = 102/1046 (9%), Positives = 274/1046 (26%), Gaps = 234/1046 (22%) Query: 8 NRLDVLEALMEFIVERERLDDPFEPEMI-LVQSTGMAQWLQMTLSQKFGIAAN-IDFPLP 65 + +L + I+ E++ L + A + L + G + Sbjct: 41 GKTQILSRRVANILTNYHTSS---EEIVCLTYTEAGASEMLDRLEKLIGEEGRKVRVSTI 97 Query: 66 ASFIWDMF---VRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFT--LLRHYLTDDSD 120 +F ++ + PK + + +L ++++ L + Sbjct: 98 HAFCSELILRNSEIFGGQPKIISTAAK------YEILKEIMDEYVIEGNPLYK------N 145 Query: 121 KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAP----LWKALVEYT 176 K + + +LF Y + R + + + E + L+ +Y Sbjct: 146 SGKRYSAKDQLLELF--YKMKRENLNKEDFEKEIDEYF--KMIDLSIPGDDLYSKF-KYA 200 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 + + I L+ T + G+ + ++ I Sbjct: 201 RNSKSKDKKVGDYKDKAINELKENTQKL--------LAGV--------EIIEKYSSDISN 244 Query: 237 HLLFTNPCRYYWGDIK---DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-- 291 H F W K + + + R ++ + ++ L Sbjct: 245 HNYFDFDDMILWTIEKLEENEGFQRSVSDTIRYLFVDEFQDTSVVQNKLVDLLVKGKDNP 304 Query: 292 -EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV 350 VG+ + + G S+ + F + + + + Sbjct: 305 NIFVVGDDDQSIYRFQG----------VSANNIRDFDKKYKPTKIV-LDENYRSSQAIID 353 Query: 351 AGVNIEEFSRSDNKRPLDPLDSS------ITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 A + + + K + + + + E+ + + ++ D ++ Sbjct: 354 ASRQLISHNPREEKLLIAAGANKDYDYQLPILKSYENAKAEMFGVLTEIKELI--DSGVS 411 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 P +I V+ F D+ + + + + S P + +++L Sbjct: 412 PNEIGVIYGRNS-----YGEEFAKILRDKGIFVQMKENKDLFSEPFFKKIVAILKYLCKP 466 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 L + + +++ + + D + A Sbjct: 467 SRDVRELRKIVY-------------FDFFEVVLSQIVMIRNLKKDEKISIPTIAEIDQKL 513 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 ++ S VL I + Sbjct: 514 EIIRKKVNQSSKYLSPMYVLSDVLKSLSIDEYIMKSKEKYH------------------- 554 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 + V ++ + + + + + ++ Sbjct: 555 --LVSVLNELYKLMLMECHIHPKL------TVKGFLNQLSALEEMG----------ISLP 596 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD--------- 695 ++ S + V + T + + F V ++ NDG + P G + Sbjct: 597 IEDISGS---PSNCVQLMTAHGSKGLEFDHVFIMKCNDGKKKSEAWPGGENNSGRFSYPP 653 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 ++ K + + + +++R LF A+ A++ L++SY S + + L+ E ++I Sbjct: 654 SLNGKDENESQLKEEENRRLFYVAMTRAKKVLHLSYANDSTKTH-------LINEFEEFI 706 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 + E + K Sbjct: 707 DEVDVTESFEDCQSVDKV--------------------------------------VMPK 728 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 + + + L ++ + TL F P+ +F L++ T + + Sbjct: 729 FSNNVINEIFDEL--SLSVSTLNSFLKCPLSFYFNKGLKLPSETNE------------AM 774 Query: 876 SRYQINQQLLNALV---EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQ---------- 922 I ++L + + + L + + + F +F E Q Sbjct: 775 VFGSIIHEVLEKIYISVDGSQSSELTAKTVLSLEEALKLFETVFEEKSYQLTSNKIKKDD 834 Query: 923 ------EMQQLADRVIACRQPGQSMEIDL----------------ACNGVQITGWLPQVQ 960 ++ L + + ++E+ + + ++I G + +++ Sbjct: 835 YARGKKIIENLYKKSGYLKDGVVAVEVPIQGIRLGDILNTTVDLSEVSNIEINGKIDKIE 894 Query: 961 PDGLLRWRPSLLSVAQGMQLWLEHLV 986 DG + + + Sbjct: 895 CDGNI-VCLVDYKTGNFENAKKKLVA 919 Score = 58.4 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 21/191 (10%), Positives = 54/191 (28%), Gaps = 18/191 (9%) Query: 830 ETVPLETLQRFWAHPVRAFFQMRL------QVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 +++ + L R+ P +F+ L ++ ++ T G + Sbjct: 1050 KSLSVSKLNRYLRCPKSIYFEDVLQLSQAAGLSAGAKEKSTKITINHAPTGPVFGTAIHE 1109 Query: 884 LLNALVEQD-DAERLFRRFRAAG-DLPYGAFGEIFWETQCQEMQQLADRVIAC------R 935 + + ++D E + ++ + E + L + + Sbjct: 1110 TMEKIYKEDLQLEDAIEFYDSSLYSHQEEIIDTMSVEELKEYGHNLLTNLFEHFIPNSLK 1169 Query: 936 QPGQSMEIDLA---CNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGG 992 S+E +L + I G + +++ D R + E V Sbjct: 1170 GEHVSLEKELRVKLGDNYSINGIIDKLEFDND-LIRVVDYKTGSAQRGVEELEVGHDYWR 1228 Query: 993 NGESRLFLRKD 1003 L ++ Sbjct: 1229 QAVFYNLLLEN 1239 >UniRef50_A7HKZ3 UvrD/REP helicase n=4 Tax=Thermotogaceae RepID=A7HKZ3_FERNB Length = 656 Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats. Identities = 63/559 (11%), Positives = 157/559 (28%), Gaps = 94/559 (16%) Query: 217 SALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL 276 + L P + ++ + I++ + + Y + + L + + L Sbjct: 173 TFLTPYEV-VIKRAKRWIQVVDVIEKVFQEYALEKERQNVLDYDDLLLKTLQMLEGNEEL 231 Query: 277 FRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVT------ 330 R + + D QD L L + L + +Q + +F Sbjct: 232 RRRISSRFKWILVDEFQDTNILQLKIVQHLSEVHGNLFVVADDAQSIYSFRGARFENVKE 291 Query: 331 --PDNLLHNIQSDILELENRAVAGVN-IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVE 387 + IQ++ + + I S R + + E Sbjct: 292 VMDGANVFKIQTNYRSTDKIVELVNSMIPRNSVPKKLRAIRTSVQKPIVVNTYDHFDEAY 351 Query: 388 VLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 + R+ ++ D DI V+ R +P+ + Sbjct: 352 FVAQRINEIV--DEGFDYSDIAVLYRAHAH-----SLELQLELTKRNIPFKVLSGLRFTE 404 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID 507 ++ ++ L + + + + +L + V E+ + + NE + Sbjct: 405 TAHVKDVVAFLKILLNPYDVISWMRVLKL-VDNVGNVTAEKIISRITSESNEEKSPLDLF 463 Query: 508 DDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567 + + + + + + +Q +L Y Sbjct: 464 LEMKIKSSNVENLKSAIFNSIDKAPSFQIKNFYEQFYQDILEY----------------- 506 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 + +E +E + + + + + L ++ Sbjct: 507 -----HYTDFRDREEDIERLIEMASY-------------------YDNVEDFLNDILISE 542 Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 + D G V + T+ + + +KVV ++G+N G +P Sbjct: 543 DVRTNESNDFSD---------------DKGKVTLTTIHQAKGLEWKVVFVIGVNPGDFPH 587 Query: 688 QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD------NSE 741 F + + D++ LF A+ A+ LYI++ ++ NS+ Sbjct: 588 ------FLALKD-------NTLDEEERLFYVAITRAKDILYITHSTLPRREYFYNSFNSD 634 Query: 742 RFPSV-LVQELIDYIGQSH 759 + V+++ + + Sbjct: 635 KQIDRDFVKDIPRDLAEFW 653 >UniRef50_C4G2E3 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2E3_ABIDE Length = 618 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 51/503 (10%), Positives = 147/503 (29%), Gaps = 86/503 (17%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIY 312 P L ++ + ++ + E ++ + VG+ + + G Sbjct: 193 PHILEAWQSKFKYILIDEFQDVSKLQFELVRKMSKPLNNIFIVGDDDQSIYRFRGA---- 248 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV-AGVNIEEFSRSDNKRPLDPLD 371 + + F + PD + + E+ AG I + + +K+ + Sbjct: 249 ------KPEIMLGFEKIYPDCKKVLLNENYRSTESILNFAGSVIHKNKQRFDKKIIAAKG 302 Query: 372 ---SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + + E + ++ + + ++ ++ + P + Sbjct: 303 VRGNLPVIKSFTDRRTEDTAIVKDIIK--SHEAGIPFSEMAIVYRTNIAARPVVVK---- 356 Query: 429 APADRYLPYAISDRRA-RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + +P+ + + +H + + + L + + L +++ P + Sbjct: 357 -LIEYNIPFIMKEMAPSIYNHFIAKNIMDYLEIANGDRARSRFLNIMNRPNRYLTRESLA 415 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + + + V + + + A +T +F L ++ Sbjct: 416 DAVVLNKDKVEY--VSFIKWTAAYKGRNWMAERINTLQFHLAKLAELSP----------- 462 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 ++ R+ + ++ L ++ + F E E Sbjct: 463 --------------------FGAIHYIRKVIGYDKFLTDYADERHIDADELFEILEEIEE 502 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 A + ++ ++ V I T+ Sbjct: 503 AAKPF-NTLKEWKESIEDFNKKQK--------------EEFEKNKNTDRDAVVISTMHGC 547 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F+ V + + +G+ P K +S +++R LF A+ A+++L Sbjct: 548 KGLEFEKVYIPEVVEGIIP-------------YKKAIRQSDIEEERRLFYVAITRAKKEL 594 Query: 728 YISYIGRSIQDNSERFPSVLVQE 750 I+Y ++ S ++E Sbjct: 595 MITYPKN--LYGKDKEVSPFLRE 615 >UniRef50_B9DZK4 ATP-dependent helicase/nuclease subunit A n=13 Tax=Clostridia RepID=ADDA_CLOK1 Length = 1238 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 74/888 (8%), Positives = 192/888 (21%), Gaps = 188/888 (21%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN---SDGEQDVGNPLLASWGK 305 GDI + ++ + + VG+ + + Sbjct: 380 GDIIPSEAALEYREYFEEIFIDEYQDSNEVQEVIMNMISRKNIYANLFMVGDVKQSIYRF 439 Query: 306 LGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE-------- 357 L S E + + + + + A I + Sbjct: 440 RQARPELFLEKYNSYDEKEGSKNRK-----IKLSENFRSRKEIIDAINYIFKQIMCREVG 494 Query: 358 ---------FSRSDNKRPLDPL-DSSITFHVCHSPQR------------------EVEVL 389 S P + + HV + E ++ Sbjct: 495 ELDYGEEECLKSSARYEPFEGNCGGDVELHVVDKKENENKLEDENEEELLDAISVEARLV 554 Query: 390 HDRLLAM----------------LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 ++ + ++ ++ +DI++++ +++P F + Sbjct: 555 ASKINELVNPSLDQYSFKVYDKEIDNYRSIMYKDIVILMRATQNWAP----AFVEELNNS 610 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P ++ ISLL + D+ +ALL P+ + E L L Sbjct: 611 GIPVFADTSVGYFQAIEIKTIISLLQIIDNPLQDIPFIALLRSPIGG----FSPEDLIDL 666 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 R E + LEL Sbjct: 667 RVVNREISFYEILKAIKEHSLELK---------------------------------YSL 693 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 + L + +L +WRR + E + + F+ Sbjct: 694 EHIDERLEYKVEQFFNKLCLWRRKVIHMPIDEFIWHIYIETGYYGFVGAMPGGIQRQANL 753 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPVNICTLMPMRSIP 671 + + Y ++L ++ V I ++ + + Sbjct: 754 RMLFERAKQYKNISYKGLFNFINFINKLKSSSTDMGNAKILGENENVVRIMSIHKSKGLE 813 Query: 672 FKVVCLLGMND-----------------GVYP-----RQLAPLGFDLMSQKPKRGDRSRR 709 F V+ L G G+ P + + ++ Sbjct: 814 FPVIILSGAGKRFNLTDINKSVLFHKELGLGPEYVNSERHISYPTIVKQVLKRKLKMETL 873 Query: 710 DDDRYLFLEALISAQQKLYIS-----------------YIGRSIQDNSERFPSV-LVQEL 751 ++ + A A++KL I+ Y S + + Sbjct: 874 SEEMRILYVAFTRAKEKLIITGTVDNIENTFQRWCEAAYCEEDKLPEYSLINSRNFLDWI 933 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 + + + E + + N++ ++ + + Sbjct: 934 GPAVARHPCGEIIRKVCPFEYNLNLITGDDSKWKVFVYSKDNFKSTLDENIDEDIIGKIK 993 Query: 812 QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAF----FQMRLQVNFRTEDSEIPD- 866 + + + + F + R ++ E + Sbjct: 994 SL--ELDNNKEIYKNEVYRRLNWTYKYEQSSKIAAKFSVSELKRRFKLIDTENGIEFMEP 1051 Query: 867 ---------TEPFILEGLSRYQINQQLLNAL-VEQDDAERLFRRFRAAGDLPYGAFGEIF 916 E L R + ++ + +++ + + Sbjct: 1052 IYLKKPAFLRESKGLTPSERGIVMHLVMQHIDIDKVGSYEQIKEQVDKLVFREFITEAEA 1111 Query: 917 WETQCQEMQQLAD-----RVIACRQPGQSMEIDLAC----------------NGVQITGW 955 ++ + + R+ + + + V I G Sbjct: 1112 KSISVYKIIKFFNSEIGIRMKKSNNVYREVPFYMEIESTELYKQLPQHIYRDEKVLIQGI 1171 Query: 956 LPQVQPDGLLRWRPSLLSVAQG------MQLWLEHLVYCASGGNGESR 997 + + + + + Y + Sbjct: 1172 IDCYFEENNELILV-DYKTDHVGDIDSIKEKYQVQIYYYGRALEKLTG 1218 >UniRef50_B7J2J0 Exodeoxyribonuclease V, gamma chain n=26 Tax=Borrelia RepID=B7J2J0_BORBZ Length = 1079 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 132/965 (13%), Positives = 320/965 (33%), Gaps = 150/965 (15%) Query: 2 LRVYHSNRLDVLEALMEFIVERERLDDPFEPEM-ILVQSTGMAQWLQMTLSQKFGIAANI 60 + +Y +N+++ + ++ + +++ + F+ E I+V++ + + ++ T+++ GI+ N+ Sbjct: 1 MYIYKTNKVNKIYNKIKELTQKD---NIFKKETLIIVKNDLLREEIKKTIAKLNGISYNL 57 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMT---LLPQLLEREDFTLLRHYLTD 117 + + ++ + + + S+ L T +L +L+ E Y+ D Sbjct: 58 NIK--KNAAKSIYEISFKNPNIKKYIEENTFSFYLETEKFILYNILKTEKL----KYIKD 111 Query: 118 DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGH---LVEGLGEAQAWQAPLWKALVE 174 + + +SK DLF Y + WE E L + Q L+K L E Sbjct: 112 FKSTKNRYFFASKIIDLFHHYYSKFSKLIETWEDNGFLFQEENLKPYENMQKELFKKLFE 171 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 NL+++ I+ + + +FI + L +L+ + Sbjct: 172 KQKN-------ILNLHKKIIQE-KPTKKIEIEIKKIIFIGNNREIEKKILNSLEKIFDF- 222 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 E+H+L Y + L K + ++ Sbjct: 223 EVHVLIFEDLLNYESTLVKELLLTK-------------TKINPIKYQALEKVD------- 262 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 ++ F +N L +I+++I+ Sbjct: 263 ----------------------------IELFKG---ENFLTSIKNNII----------- 280 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV--MV 412 K P+ LD S + +REVE+L ++++ ++++ L DI + + Sbjct: 281 --------AKTPISTLDDSFKIIEAKNQKREVEILTNQIVHSMQKN-NLKLSDIAITCLQ 331 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYA--ISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 + Y P+I+ + + +S + + L + S F ++V Sbjct: 332 EKFNEYLPYIEECLNKYEIEYSVLCYNNLSRGESIIALKRLMDLFVSKNGTISNFSRKEV 391 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 LL + +F+I+ L YL ++ + I +G + + L ++W G R Sbjct: 392 FDLLSNNKVMKKFNISTSELNYLIEFSDTMNISFGANKTHKENLNYDQNFLNSWEDGFNR 451 Query: 531 MLLGYAMESA-QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 L+ + + E Q + I +L+ + SL +N ++ + E + Sbjct: 452 FLMSEIFDEKYEEETQKESTRFQDQESIMKLITIVKSLYEDINYFKNKAYKVYEWAEIIE 511 Query: 590 VCRDMLNAFFLPDAETEAAMTLIE-------QQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 + + E I+ + L + L + L Sbjct: 512 IFIQKYIDLEDFNTTDEYLQNKIKSFKNFPKDLNDNLYKNYLKEINEIKIEFYLFKIMLE 571 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 + L++E+ + + I + + K + LG + ++ +L+++ + Sbjct: 572 ESLEKEKYGVMYKKNGILIANYKEIEYLQKKEIHFLGFQK--FNSKINYDNMNLLNEYYE 629 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 + + ++ + + +K Y+ + E S + +++++I + Sbjct: 630 HENTEK--EEITALFNLIFATSEKFYLYCSFQDNLS-PEINTSKTINKILEHIQKYEKNF 686 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ---SYAREWLPAASQAG--KAH 817 H DP ++ + +Y E A K Sbjct: 687 Q-----------------IEKHPNENHDPVYFKDAKENYLINYDPEAYNIAKILQNSKPI 729 Query: 818 SEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQ-----VNFRTEDSEIPDTEPFIL 872 + P + L L+ ++P + F++ L + E E + + F + Sbjct: 730 GFKQNKIKLESPIKLNLYELKNALSNPYKHFYEKTLNVKIQDIRLENEIKEKQEEQIFSV 789 Query: 873 EGLSRY-----QINQQLL-----NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQ 922 + + + + +A + + R G +P+ + + Sbjct: 790 IEIIYRLIKNSTLLHEYIMGKKDDARKAIEIIKNHIRYEIQQGSIPFNIDQKTTVNEILK 849 Query: 923 EMQQL 927 ++ +L Sbjct: 850 KINKL 854 >UniRef50_A3EU22 Putative ATP-dependent DNA helicase, UvrD/REP family n=2 Tax=Leptospirillum sp. Group II RepID=A3EU22_9BACT Length = 746 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 59/565 (10%), Positives = 134/565 (23%), Gaps = 110/565 (19%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDY 310 +DP + ++ + L VG+ + Sbjct: 197 QDPEVRETYQRQFEHILVDEYQDTNPLQERLLRLLSRDRQNVTVVGDDDQS--------- 247 Query: 311 IYLLSDLESSQELDAFVDV-----------TPDNLLHNIQSDILELENRAVAG---VNIE 356 + F P + + A ++ Sbjct: 248 ------------IYRFRGAEVGHILSFPKEYPGARQVVLTVNYRSTRPIVTAASSMISSA 295 Query: 357 EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADID 416 + + S E + + + + RD +V+ Sbjct: 296 LARYRKDMVSTGRPGEPVFLKKLDSEWAEARFVARTIQEKV--ERGAMFRDQVVLFRMNV 353 Query: 417 SYSPFIQAVFGSAPADRYLPYAISDR-RARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 PFI A A+ +P+ + + + ++ L + + F + +L+ Sbjct: 354 QAQPFI-----RAFAEAGIPFQTRGAVQGFFNRREIRDLLAYLRVSANPFDRISLGRILN 408 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 VP G+ + ++ P L+ L G Sbjct: 409 VPP---------------------RGMGEKARERLDQQAGNPGLSSWELLERLSLELSGK 447 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 A ESA+ + RR + P Sbjct: 448 ARESARAFANDLEEAS-----------------------RRVRRGDGPFSLLQFWLSRTG 484 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL-----LRDELAQRLDQERI 650 ++ + E+ E+ + ++ G +EL ++ Sbjct: 485 YEQWVSEGESGEEGPGREENLKELLRMSERFGDGIGELTDRTPTGVFLEEL-ALSQEDPG 543 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 V++ T+ + + F V L G + + P + D+ + Sbjct: 544 EAGESPDRVSLLTIHQAKGLEFPHVYLAGAEEDILPMKSR--------------DKVDVE 589 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELIDYIGQSHYLPGDEALN 768 ++R LF A+ A+ L I++ PS ++++ Q Sbjct: 590 EERRLFYVAMTRARDSLAITWCLTRQLFGRTESPRPSRFLRDIPPEAVQGDRPVFRPETP 649 Query: 769 CDESEARVKAHLTCLHTRMPFDPQN 793 + + + Sbjct: 650 VSRQTSELPPRKVFPPPSLAPSRPA 674 >UniRef50_C7RGF9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7RGF9_ANAPD Length = 1121 Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats. Identities = 87/881 (9%), Positives = 229/881 (25%), Gaps = 145/881 (16%) Query: 174 EYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFI----CGISALPPVYLQALQA 229 + + +LY+ I+ + T L +F +S + + ++ Sbjct: 279 KDVEEDYSFIKDTRDLYKEDIKNVAKFVTNTDSLTMELFAKKEEDLLSEINVLVKDFMKV 338 Query: 230 LGKHIEIHLLFTNPCRYYWG-DIKD-PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF 287 + E + D+ D KL + F++ + + +L Sbjct: 339 YRRLKEEKAYLDFSDMEHKFIDLIDIEEARNKLRETYKYIFFDEYQDSNEIQNYIIEKLK 398 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN 347 D VG+ + +G + L L +A+ ++ ++ + ++ Sbjct: 399 GEDNLFFVGDVKQSIYGFRRAEPKLFLEKL------EAYDKDDK-SVRIDLNKNFRSQKD 451 Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQ---------------REVEVLHDR 392 I + + + +D D + + Q RE + L Sbjct: 452 VLDFDNFIFDRLMTKEESDIDYRDGGHRLNFNKNEQSAYERANIKVIDSKIREEDYLAKL 511 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 + + RDI +++ V+ A +P+ + + Sbjct: 512 IEEI--RAMGYDYRDIAILLRSGGK-----SYVYEEAFKKAEIPFFNDISKVSFRAVEVT 564 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 FI+LL + +L+LL + FD E+ L +R + D+ + Sbjct: 565 FFINLLKYLANPKDDLTLLSLLRSEI----FDFDEDDLVEIRLSSDSYSFTKAFDEYDKD 620 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 + ++ + + +++L E + + E G LL + Sbjct: 621 ------------EEIVEKINDFKTIFADLTYVKNLLSLYEFANYVFEKTGFYEYLLAR-- 666 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 + + + + I+ E Sbjct: 667 -------------------------------DRASDRINNVESFIDIMDEYDRTNDNGLF 695 Query: 633 PLSLLRDEL---AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 D L Q V I T+ + + F VV L + + Sbjct: 696 GFLEFVDSLSINQSDNIQTTRELSEAEDLVRIMTIHKSKGLEFPVVILADCG-KRFNNKH 754 Query: 690 APLGFDLMSQKP-----------------------KRGDRSRRDDDRYLFLEALISAQQK 726 + + + ++ + A+ A++ Sbjct: 755 LREPIVFDDDLGIGINLSDYENKLRFSSLRKNLINDKITKENKKEEMRILYVAMTRAEEM 814 Query: 727 LYISYIGRSIQDNS------ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 L+I+ S + ++ + + + + + A L Sbjct: 815 LFITGERNLKTVGRLKGRIDFLNMSTYMDWILSILSRDKV-SEELFEEYETNALDGLASL 873 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP--LETLQ 838 + P D + + + K + P E++ + + Sbjct: 874 EVIEESDPIDKFESKDITDFLKSEDVNQEIYNKLKQIFDSPYPYEDQTRESIKRSVTEIS 933 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPD-------TEPFILEGLSRYQINQQLLNAL--- 888 + + + + ++ E+ D E + + + ++ AL Sbjct: 934 KDFDPSLDGY-----RLPNYEENELAGDFRKANFIREEKSYKATDKGTMIHRIFQALDFK 988 Query: 889 ------VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME 942 ++++ + + L +I + ++ ++ + R+ Sbjct: 989 DYDKVSLKEEIDRLIREKRIEEDSLDLVDLDKILGFFEDPFIKDISQKATNIRKEE---S 1045 Query: 943 IDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLE 983 + + G + + + + L Sbjct: 1046 FLMTYEDYYVNGQIDLIFEIDDK-VILIDFKTDRTKRENLY 1085 >UniRef50_A6TVN2 ATP-dependent helicase/nuclease subunit A n=2 Tax=Alkaliphilus RepID=ADDA_ALKMQ Length = 1197 Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats. Identities = 80/940 (8%), Positives = 206/940 (21%), Gaps = 191/940 (20%) Query: 191 QRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGD 250 + ++E L L V + Y Q K + ++ N +Y + Sbjct: 319 EAYVEDLNKLHPLMDYLYQLV-----TGFTSRYAQ------KKADRGIVDFNDLEHYGLE 367 Query: 251 IK-DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD 309 I + + R ++ + + D VG+ + + D Sbjct: 368 ILANELVAQEYQQRFEYIFVDEYQDSNIVQETLIQSIKRKDNLFMVGDVKQSIYRFRLAD 427 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK----- 364 + E+ E + ++ D + + + ++ S Sbjct: 428 PSLFIEKYETFGEKEGDINRRID-----LAKNFRSRGEVLAGVNYLFKYIMSKELGEIGY 482 Query: 365 ----------RPLDPLDSSITFH-----------------VCHSPQREVEVLHDRLLAML 397 + SI + + E ++ R+ +L Sbjct: 483 DHRAALYQGASFESIKEPSIEVNLIEKNMEIDEDIEEELQELADIEVEARIIAKRIKDLL 542 Query: 398 EED---------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 E+ L +DI+V++ +++ F A +P Sbjct: 543 NEEIYDEKNEVYRRLEFKDIVVLLRTTKNWA----QSFLEAFIREGIPAYADANTGYFEA 598 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 + F++LL + D++ +++++ P+ Sbjct: 599 IEVGMFLNLLKVIDNKRQDIPLISVMRSPI------------------------------ 628 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 F ++ + + ++ Y L L S + Sbjct: 629 ---------------GEFTTAELIDIRINDKNGTYYDAIEKY--IEKNEDALKDKLVSFI 671 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 +LN W + + + D +++ + ++ Sbjct: 672 EKLNKWGNEARYIKIDQFIWKLLMDTGFYYYVGAMPGGLQRQANLRILFDRASQFEKTSI 731 Query: 629 GDAVPLSLLRDELAQRLDQERISQR--FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 ++L ++ V I ++ + + F VV GM Sbjct: 732 KGLFNFIKFIEKLQGSKGDMGAAKILGENDNVVRIMSIHKSKGLEFPVVIAAGMGKNFNL 791 Query: 687 RQLAPLGFDLMSQ----------------------KPKRGDRSRRDDDRYLFLEALISAQ 724 R + + ++ + A + Sbjct: 792 RDTSADVLLHKDLGLGPKFVDSNLRTYRDSIAKLAMKDQIKIESLSEEMRILYVAFTRPK 851 Query: 725 QKLYIS------------YIGRSIQDNSERFPSVLVQELIDYIGQ-------------SH 759 KL I + + S + + + + Sbjct: 852 DKLIIVGSLRKIDRLVTNWNQADNIYSLMNAKS-YLDWIGAALIKHPHGEVLRELGDFEF 910 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ--AGKAH 817 +A + + + L + + + RE + Sbjct: 911 NELKYKAEDSKWTVNILGRQAVVLEEHEKRLKEEEYKEKLTHFNREDFSPHRHTEHKEEI 970 Query: 818 SEFVQPLPFTLPETVPLETLQ-RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS 876 + TV L + + L Sbjct: 971 DNRLNWQYPYPQATVIPSKLSVSDIKKANMGEMDSIVHQIPTLVKTPKFMEGKKALTAAE 1030 Query: 877 RYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWE------TQCQEMQQLADR 930 R I +L L + + E + ++ R Sbjct: 1031 RGTIIHFVLQHLALNQVGSEEEISQQIDLMVARELITEEEAQVVNVGKIVNYFKSEIGKR 1090 Query: 931 VIACRQPGQSMEIDLA--------------CNGVQITGWLPQVQPDGLLRWRPSLLS--- 973 ++ + + + + + G + + Sbjct: 1091 MLGAEKVYRESPFIIEKSAKDVIHGLSENLEEKLLVQGVIDCYFEEMDGLVLV-DYKNDI 1149 Query: 974 -----VAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRF 1008 A M + L+ A + +++ + F Sbjct: 1150 VLNGDTASIMTRYDVQLMMYAEALERITGKQVKETYLYLF 1189 >UniRef50_A5DZQ5 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DZQ5_LODEL Length = 939 Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats. Identities = 60/588 (10%), Positives = 158/588 (26%), Gaps = 103/588 (17%) Query: 244 CRYYWGDIKDPAYLAKLL---------------TRQRRHSFEDRELPLFRDSENAGQLFN 288 R Y + D L R ++ + + + Sbjct: 220 YRAYQNKLSDERKLDFDDCLLSCYKLVTRIPVLHHVRHVLVDEFQDTNEIQLQLMYEFAK 279 Query: 289 SDGE--------QDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQS 340 D VG+P + + + + + + ++ Sbjct: 280 GDPLNLQYQHNVTLVGDPDQSIYAFREAQSNNF------HKMKEHYTTQDLSCSVVSLTE 333 Query: 341 DILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 + ++ + + N P + S +E + ++ + Sbjct: 334 NYRSTKDILDFSERVMTQQPDRILKNLNSQCPHSFKPVYLNLSSAAQEASWIAYQIDFLQ 393 Query: 398 EE-DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + + +I ++V + + + + +PY + +A + A + Sbjct: 394 QLPHNPIKYDEISILVR-----AAYQTRAIEAELVRKRIPYIMVRGKAFWERKEVTAIMD 448 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 L + +L L+ P + L + + + + N Sbjct: 449 YLRVCGEPNDRIAILQTLNYP----KRGFGAVTLEAIDRAITTAITSSNATSINTSTTTT 504 Query: 517 PATGQH-------TWRFGLTRMLLGYAMESAQGEWQSVLPYD-----ESSGLIAELVGHL 564 T + + +SA+ + +L + + E + Sbjct: 505 TVVDDLNNVNNTITVKDANNTFINKRTKKSARDVLRGLLESNNQYGVKLPLKAKESLKGY 564 Query: 565 ASLLMQLNIWRRGLAQERPLE--EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 ++ Q + L +E ++ + + + L + + + + Sbjct: 565 IKMIDQAQVMLDNLEKEEQIDPLKVARLFDQIYTDSGLKKEYESEEKEEVRLNVEEVKTQ 624 Query: 623 GLGA-------------------------------QYGDAVPLSLLRDELAQRLDQERIS 651 + + + D + Sbjct: 625 FCEFTPQSDLFMEEVTLDEIEESNNGKTDLINSTNDDLGENFIRKFVESVGLYEDDKTGD 684 Query: 652 QRFLAG-PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 ++ V I T+ + + + VV + G+++G+ P GF L + D + + Sbjct: 685 EKKKKKVGVAISTIHGSKGLEWPVVFVPGLSEGLLPA-----GFALTTD-----DPNSLN 734 Query: 711 DDRYLFLEALISAQQKLYI-SYIGRSIQDNSERFP----SVLVQELID 753 ++R F A A+ L+I SYI + +S R P S ++ + + Sbjct: 735 EERRCFYVASTRAKTLLFISSYIEKEYSGSSWRKPIDTVSRFLKAIDE 782 >UniRef50_Q1WRS0 ATP-dependent helicase/nuclease subunit A n=3 Tax=Lactobacillus RepID=ADDA_LACS1 Length = 1248 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 70/663 (10%), Positives = 157/663 (23%), Gaps = 133/663 (20%) Query: 153 HLVEGLGEAQAWQAPLWKALVEYTHQL---GQPRWHRANLYQRFIETLESATTCPPGLPS 209 GL + Q Q + + + A E + + L Sbjct: 289 KSDRGLDDDQKKQKERINKTLRDGSKKIIEDLSVKYFALPEDEIKELTQKSKQIVETLSE 348 Query: 210 RVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKD-PAYLAKLLTRQRRHS 268 V G + + + L N D D +L + + Sbjct: 349 VVKEFGAEFSKEKRRRHVLDFSDLEHLTLQILN------TDTPDGRRVKERLKNKFKEIM 402 Query: 269 FEDRELPLFRDSENAGQLFN--SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAF 326 ++ + + + VG+ + +G D L +F Sbjct: 403 VDEYQDTNQLQETILTTIAHKNPGNMFMVGDVKQSIYGFRLADPGLFLKKY------QSF 456 Query: 327 VDVTPDNLLHNIQSDILELENRAVAGVNIEEF------------------SRSDNKRPLD 368 D+ + + +EN I + Sbjct: 457 ATDDNDDERIILAENFRSMENVTAFTNLIFSQLMDEKVGEMAYDEDARLVYGAKYYPEET 516 Query: 369 PLDSSITFHVCHSPQREVE-------------------VLHDRLLAMLEEDP-------- 401 P+ + + + +E + + R+ ++E Sbjct: 517 PIKAEVLVYESEDSSQESDDEPVNEDFSIDNKAQGQIVMTAKRIKELVENGEKIYDKKQG 576 Query: 402 ---TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 + RDI ++ + + +P + D + L+ +S L Sbjct: 577 TIRPIEYRDIAILAPTRKNNL-----ILTEEFKRLGVPIFVPDAQNYFQTTELKIMMSFL 631 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + D+ + ++A+L P++ + +N Sbjct: 632 QIIDNPYQDIPLVAVLRSPIVGLK--------------------------ENELAYLRIN 665 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + + + +E A QS+ +A L QL +R Sbjct: 666 DKTGDYFQAVESFYDNFEVEKASAFAQSL-------------YEKIAIFLKQLTEFRNMA 712 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 Q + + ++ AE + Sbjct: 713 QQNELASLIWKIYEETGFLDYVGGMPGGLQRQANLHALYERAAEYEEMSFKGLFQFVRFI 772 Query: 639 DELAQR-LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY------------ 685 +++ + D + + V + T+ + + F VV LL Sbjct: 773 NKMQTKNKDLSEATTQVSDDAVTVMTIHGSKGLEFPVVFLLDATHKFNVGDLNKPYLLNA 832 Query: 686 ----------PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 P + K+ + + L AL A+Q+L+I + Sbjct: 833 DDGIGISYLDPDTRVKTDTLMKVIAGKQALKKLAAEQMRLLYVALTRAEQQLFIVGSYKD 892 Query: 736 IQD 738 + Sbjct: 893 KNE 895 >UniRef50_Q6FLH1 Strain CBS138 chromosome L complete sequence n=1 Tax=Candida glabrata RepID=Q6FLH1_CANGA Length = 1088 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 69/598 (11%), Positives = 156/598 (26%), Gaps = 64/598 (10%) Query: 189 LYQRFIETLESATTCPPGLPS-RVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYY 247 L ++ I L+S+ P +S +Y L L LL Sbjct: 192 LIKKHISRLKSSAILPQEYKDDSAHDSALSHFYELYQDELFKLNALDFDDLLMFT----- 246 Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE-----QDVGNPLLAS 302 + L + ++ + + L + VG+P + Sbjct: 247 ----FRLLTAERCLPFVQHVFVDEFQDTNSIQIDLMFLLARGNHHISRGITVVGDPDQSI 302 Query: 303 WGKLGRDYIYLLSDLE----SSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 + + + IL+ + Sbjct: 303 YAFRYALAHNFQEMSNKCPLECSRVILVENYRSSQK-------ILDTSETLIKQQQKGRE 355 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 R K + + + E + +L + + ++V Sbjct: 356 QRLPLKAQFTSHILPV-YMNFPAYFLEAPSIAREILYLKSLPNLFSYDSFAILVRKRRQI 414 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 + + + +PY I RA + A +++ + S E ++ + Sbjct: 415 -----RMIEKSLIEYRIPYQILRGRAFWELKEIMAMLNIFRIMVSENDEEAII----SSL 465 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNV----RELELPATGQHTWRFGLTRMLLG 534 + LR+ + + ++ N+ R GL +++ Sbjct: 466 SYPSRGFGDTSAERLREIFAKYTDKTKLEILNLIAIGRVYVDIPKSARGVVSGLCKLVEE 525 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 E+ Q ++ + + L + + + Sbjct: 526 CNKENGQELSVRLVKVFDLIYEKSGLKHEFLFKDGKKKGEIDIDGDPNLENPRHKNIQLL 585 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 + F + + +M E + I A + + L+ ++ ++ Sbjct: 586 RSYFVDTEENQDDSMINQENTALSSINTTKSHGISLADYILQFLNSLSLFAGEKTVATTD 645 Query: 655 LAGP-----VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD---- 705 V +CT+ + + + VV + G D P + D S + GD Sbjct: 646 DGNKGTLGTVTVCTIHGSKGLEWPVVFIPGCEDNNIPAIFSDDK-DNTSDNEEEGDGDNK 704 Query: 706 -------------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 D++R +F A A+ LY+S + R PS + + Sbjct: 705 EELTNKKSQNNNVEESIDEERRMFFVAQTRAKYLLYLS-SVTDMDAAVPRVPSRFLTQ 761 >UniRef50_A5ZAT8 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5ZAT8_9FIRM Length = 1220 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 95/886 (10%), Positives = 215/886 (24%), Gaps = 159/886 (17%) Query: 171 ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL 230 + E + + L F++ L+ GI AL L Sbjct: 318 QVFESICETKSSVEYIGKLTLEFMKRLKEQKEEK----------GIMDFNDQAFFALHIL 367 Query: 231 GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL---F 287 ++ + G++ + T+ + ++ + + F Sbjct: 368 NEYDK------------DGNLVPSETAKNMATQFKEIMIDEYQDSNIIQEAILSAITKGF 415 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN 347 + VG+ + + + L S D + D++ + + Sbjct: 416 GINNMFMVGDVKQSIYRFRNAEPKLFLEKYNSFS-----DDPSADSVKIVLDKNFRSRRE 470 Query: 348 RAVAGVNIEEFSRSDNK------------------RPLDPLDSSITFH--VCHSPQREVE 387 + + +F + P D+ F E Sbjct: 471 VIESVNFLFDFVMHEEVGGIDYKNGNGLVLGADYDEPPAGQDNLTEFVMVEGGDKSDEAA 530 Query: 388 VLHDRLLAML------------EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 + ++ + ++ + DI++++ + S ++ + + Sbjct: 531 YVARKIKEITNPETGLKITEKGKDMRPVRYGDIVILLRSMKDNSD----IYREQLENNGI 586 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 P + + ++LS+ D+ + A+L P+ Sbjct: 587 PVFAESKTGYYKTMEVMTITNMLSIIDNPRQDIPLAAVLTSPMF---------------- 630 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 G D + + ++ + + V Y SG Sbjct: 631 ---------GFDSNQLAIIKTENVC--------------------ESFYDCVEQY-SLSG 660 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 EL L L L +R + + + + AF++ L Q Sbjct: 661 SDVELRTRLTEFLNTLTKFRNMVPYTTVYDLINTLLDETGYAFYIRSMPGGKKRLLNIQA 720 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELA--QRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + Y +++ + D E + V I ++ + + F Sbjct: 721 LKEKAVAYDETSYKGLFNFLRYIEKIQYLAKDDGEASTVNENDNIVRIMSIHKSKGLQFP 780 Query: 674 VVCLLGMN--------------------DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDR 713 VV L N D + + L + + Sbjct: 781 VVFLCNTNGTSKNEANQLVSGADGNIGIDCINNKLKTKQTPLLKTYIRMSNKEEDVAETL 840 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE-- 771 + AL A++KLYI+ + N+E+ ++ D Y A E Sbjct: 841 RILYVALTRAKEKLYITG----LVKNAEKQIGEFESQIYDNSELMLYNDVIGAKTIMELI 896 Query: 772 -----------SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF 820 K C + D E Q L A E Sbjct: 897 GKTIGRNKAFDCVRTDKDATECGNPLYDKDSFIKVKVEEQPDVILGLAAEDITDSIKKET 956 Query: 821 VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQI 880 + L + F + + + ++ S + Sbjct: 957 MLMEMKQLANKENTSIEKLFQR--FQFQYPYIEDITLHSKASVTEIKKQSQGMEQEE--- 1011 Query: 881 NQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQS 940 Q A E+ + + F T + +L D + Sbjct: 1012 EQDAFQAFGEEVELPEIIPDFEKEDIDEPQYLTGAMRGTAYHRIFELLDMELE---EYNQ 1068 Query: 941 MEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV 986 + +G G + ++ ++R + + + + Sbjct: 1069 ETVKKMIDGFVDAGLIDRMGAASVMRKDIIDFTKSDLFRRMKKAYA 1114 >UniRef50_B2JFG2 UvrD/REP helicase n=33 Tax=Proteobacteria RepID=B2JFG2_BURP8 Length = 750 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 57/548 (10%), Positives = 123/548 (22%), Gaps = 83/548 (15%) Query: 247 YW-GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASWG 304 YW +PA A L R ++ + + L + G VG+ + + Sbjct: 257 YWSHMAAEPAIAADLSGRFDHVLVDEYQDTNRLQASILLALKPDGRGLTVVGDDAQSIYS 316 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK 364 G +L F L + + A + + + N Sbjct: 317 FRGATVRNILDFPAH------FDPPARQVTLERNYRSTQPILEASNAVIGLASERYTKNL 370 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 P + + +++LA + + + V+ + A Sbjct: 371 WTDKPSAQRPHLVTVADDADQARYVVEQVLA--AREAGMKLKSQAVLFR-----AAHHSA 423 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 R +P+ ++ +S+L ++ + + Sbjct: 424 TLEIELTRRNIPFVKFGGLKFLDSVHVKDVLSVLRWAENPRDRVAGFRV-----VQLLPG 478 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 + + + G + Sbjct: 479 VGPATAARVLDDIAARADALGSAGGLEAAHGVSTCAAGALTA------------------ 520 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 A + + + ++ P + R + E Sbjct: 521 ---------FAPPARTLEDWHPFVAMMASV---CGRQTPWPAEFEMVRRWYEPHLQRNHE 568 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA----QRLDQERISQRFLAGPVN 660 + Q ++I EL E + Sbjct: 569 DASIRQADLVQMESIAGTYASR--------ERFLTELTLDPPDATSDESGVPLIDEDYLI 620 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + T+ + ++ V +L DG P G D++R L A+ Sbjct: 621 LSTIHSAKGQEWRNVFVLNGVDGCIPS------------DLGTGSEEEIDEERRLLYVAM 668 Query: 721 ISAQQKLYISYIGRSIQDNSE--------RFPSVLV-QELIDYIGQSHYLPGDEALNCDE 771 A++ L+I R N + + L+ + P A E Sbjct: 669 TRAKEDLHIVMPQRFYVHNQTHLGDRHVWASRTRFIPPHLLPLFDSHAWPPAPVASAPTE 728 Query: 772 SEARVKAH 779 A Sbjct: 729 MGLAAAAQ 736 >UniRef50_C8WQE1 UvrD/REP helicase n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WQE1_ALIAD Length = 1240 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 106/978 (10%), Positives = 230/978 (23%), Gaps = 177/978 (18%) Query: 154 LVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFI 213 + L W++ E + L ++ + A R I Sbjct: 276 DPDRLAPLVHWESARLSKEYEPFKKWRGKANEAMKLLRKVLRR-GRAALEADVRAMRPHI 334 Query: 214 CGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIK--DPAYLAKLLTRQRRHSFED 271 ++ + L +A + +E + L + + ++ D A L R R ++ Sbjct: 335 EVLTGVARDTLA--RAQSRRLEENRLSFSDLEHLAHELLAKDEGVRAALHARYRYVFVDE 392 Query: 272 RELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL------ESSQELDA 325 + + G VG+ + +G + L+ + + +D Sbjct: 393 YQDTSPIQDAIVDAVAPPGGLFLVGDVKQSIYGFRMAEPGLFLARYRRYAEKDGGEAIDL 452 Query: 326 FVDVTPDNLLHNIQSD-ILELENRAVAGVNIEEFSRSDNKRPLDPLDSS---ITFHVCHS 381 + + + + +L + VAG + + + D + + S Sbjct: 453 SANYRSRSGIVRFVNYLFGQLFHADVAGFDYADGHEMKPEAAYPDDDGGPCPVKIKLFFS 512 Query: 382 PQR--------------------------------EVEVLHDRLLAMLEEDP-------- 401 E + D++ LE Sbjct: 513 GDAGNDRVEETEEPERADAKGEDEDEQVAREKLEIEAMWVADQIARALERQERVYDRAAK 572 Query: 402 ---TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 L +D+ +++ + A R +P + +SLL Sbjct: 573 AYRPLRYQDVAILLRAGGENLNTVV----QVLASRGIPAVARSSSGFFRAMEIRWAVSLL 628 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + D+ S + A L P + G+ DD++ + Sbjct: 629 TALDNPLDSLALAAALKSPFV-------------------------GLSDDDLAAARIAC 663 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 W A + +L WR Sbjct: 664 PRGPLWHAVREAARDTEGARDALRL-----------------------AVERLERWRGLA 700 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 P + + R++ +L A +Q + L+++R Sbjct: 701 HTLAPGDLLREIAREVEIDLYLRAMPRGLARAANLEQLIRLAQSHAPHAGDLYRFLAMVR 760 Query: 639 DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLA-------- 690 L + + A V + T+ + + F V +L + + Sbjct: 761 G-LEEADVDLGHAHGASADSVAVMTIHGSKGLEFPHVYVLCLGRQFPHNKRTLALHRRLG 819 Query: 691 ------------PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY------- 731 + + R ++ + AL A+++L + Sbjct: 820 IGATMCDVQTGVHWRTVPSIAVDQANLEASRAEEARVLYVALTRAKERLVLVGHAGKVAK 879 Query: 732 ---IGRSIQDNSERFPSVLVQ------ELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 D P ++ ++ + + D A + A Sbjct: 880 LADAAEGHDDEGRLTPEAFLKGNSYASWILPALMRHPDGAWLRKEAGDARAALLDAPGVR 939 Query: 783 LHTRMPFDPQNYQPG----ERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQ 838 + D + + PA + + P V E Sbjct: 940 FELEVEVDGRPQGQESGEPRSSLFKAPLPPAEEVERELRRLWQGPAWRYRAVRVASEQRG 999 Query: 839 RFWAHP--------VRAFFQMRLQVNFRTEDSEIPDTEPF---ILEGLSRYQINQQLLNA 887 + P R F + L+ R S + D R + Sbjct: 1000 SRVSLPSKLTATDIRRLFAERELRARGRHAGSVLEDPAFVRQSGASPRERGVAFHAFMQR 1059 Query: 888 LV-----EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ-QLADRVIACRQPGQSM 941 DD R + G L + + L RV+A + + Sbjct: 1060 APMQPYANPDDVRRAAQALLEQGLLDERMASALDPDDVLAFFASPLGRRVLAAGEVYREQ 1119 Query: 942 EIDLACN--------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN 993 + V + G + + D + Q + A Sbjct: 1120 PFFYRLDVRAGDAQAPVVVQGVIDCLIRDARG-YAVIDYKTDQVRDASDLDRLVRAYEPQ 1178 Query: 994 GESRLFLRKDGEWRFPPL 1011 + ++ P + Sbjct: 1179 VATYAAAVREAVGTEPEV 1196 >UniRef50_C0Z545 ATP-dependent nuclease subunit A n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z545_BREBN Length = 1275 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 86/949 (9%), Positives = 205/949 (21%), Gaps = 210/949 (22%) Query: 183 RWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTN 242 + + ++++ L+ L V + L+ L G + L Sbjct: 321 EQYFSTPAEQYVADLQRIAPHMQTLARLVTAFSDAYQLEKRLRGLVDFGDLEHLALRVLT 380 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL------FNSDGEQDVG 296 G + +L + ++ + + VG Sbjct: 381 ETNES-GKTVPSSISTQLREQFAEVLVDEYQDINLVQETILQMVSRDGANGQPANRFMVG 439 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHN---IQSDILELENRAVAGV 353 + + + + L + Q+ + + + ++ A Sbjct: 440 DVKQSIYRFRLAEPKLFLEKYVTYQK----DGDADEACIGRRIDLAANFRSRREVVDAVN 495 Query: 354 NIEEF----------------------------------SRSDNKRPLDPLDSSITFHVC 379 + ++ + + Sbjct: 496 FLFRQIMSHGVGEIGYDPSAELINRASYPEAQPNRLQAEMHLIDRNTVIADEGQAVVAEA 555 Query: 380 HSPQR-----------------EVEVLHDRLLAMLEEDPT----------------LTPR 406 E ++ R+ +E L R Sbjct: 556 TDEGEAGIPDGESAEEASVAQLEARLIASRIRRWMEPGEGEEPLLVFDKKAGGMRPLAYR 615 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 DI++++ + +P + +E +SLL + D+ Sbjct: 616 DIVILLRATSGWG----QTMQEELHAAGIPVYAEQTAGYFAATEVETMLSLLRVIDNPLQ 671 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 + A+L P++ R Sbjct: 672 DIPLAAVLRSPIVGLR------------------------------------------EQ 689 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 L ++ + YA Q+VL Y E L +L +WR + E Sbjct: 690 QLAQIRIHYATG---PFHQAVLQYAEERPPQESWEKRLRQFFGRLGLWRTEARRGALSEL 746 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 + R+ ++ E + + Y D L + + Sbjct: 747 LTMLYRETGYLDYVAALENGQQRQANLRALYDRARQYEAGSYRGLFRFLRFVDRLQEAGN 806 Query: 647 Q--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG--------------------- 683 E + V I T+ + + F VV + GM Sbjct: 807 DMGEARTIGENEDVVRIMTIHKSKGLEFPVVFVAGMGKQFNTMDLKSQFLLHKDLGFGPM 866 Query: 684 -VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS------- 735 V P ++ R ++ + AL A++KL + + Sbjct: 867 AVEPSMQLRYPSLAALGIRQKLRRDMLAEEMRVLYVALTRAREKLILVGSSKDLAKSVTD 926 Query: 736 -IQDNSERFPSV--------LVQEL-IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 + + S + + + S V+ + Sbjct: 927 WGRQDDSERLSDEDLIQAKGYLDWVGRAMLRHPGAGLLRAYPEQQGSGDVVRVRSVPDDS 986 Query: 786 RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPV 845 F Q + + + + + + + L HP+ Sbjct: 987 VWSFHFYQADELRAQGESANHEASLWERMTRREAIAERPSDDILREIVEKRLGWQDPHPI 1046 Query: 846 R---------AFFQMRLQVNF----------RTEDSEIPDTEPFILEGLSRYQINQQLLN 886 + + +V+ + + + + L + I + Sbjct: 1047 APRVAAKWSVSELKRHAKVSKGGQPLTLPSITEKPKFLSEQKSNRLTAAEKGTITHLVFQ 1106 Query: 887 AL-----VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQ-EMQQLADRVIACRQPGQS 940 L +++ D A L + + L R+ + + Sbjct: 1107 HLDLKRPLDEADIREQVTALAAHRFLTDEQVQAVDVPQIARFFADPLGQRMKSAAVVHRE 1166 Query: 941 MEIDLAC--------------NGVQITGWLPQVQPDGLLRWRPSLLSVA 975 + L V + G + + + Sbjct: 1167 LPFTLVLPAYEVEAELGEESDEQVVVQGVIDCLLEEPDGSLVLIDFKTD 1215 >UniRef50_UPI0001788A90 UvrD/REP helicase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788A90 Length = 822 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 66/511 (12%), Positives = 143/511 (27%), Gaps = 82/511 (16%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 D LA L +R R ++ + E ++ VG+ +G G Sbjct: 242 DSGLLASLQSRYRYVMVDEFQDTGLLPYELLKKIVAPHRNLMVVGDDDQTIYGFNGA--- 298 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA---VAGVNIEEFSRSDNKRPLD 368 ++ + F P + + + L + + + E R R Sbjct: 299 -------RNEFILEFDQTFPGAKVVTLDINYRSLSSIVGLGNEIIRVNERRRPKQLRSTR 351 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 S + P +E E+L + + + RD ++ ++ A+F Sbjct: 352 KSSSVPLYLRPGDPDQEAELLLTHITEQV-REHGKQYRDHAILYRTANNSR----AIFEQ 406 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + +++ + L L R + +L + Sbjct: 407 LVMREIPFIHYENGDLFYEQWIVKPLMDHLRLSLDRRNFTAMEGMLHTLYINR------- 459 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 ++ + L P R Sbjct: 460 --DKGMAFIRQQDAPRPKKGPLSHLLSFPGLKDFQIENIRER------------------ 499 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + +GL PL+ + R + F + Sbjct: 500 -----------------------SKLIKGLKAMEPLQAVQEMRRQFYDKFLEA--DERQE 534 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL----DQERISQRFLAGPVNICTL 664 +TL ++ Q + E A ++ + + + + + + A V + T+ Sbjct: 535 ITLHKEFIQEGLDEL-EASAKRFGDIAEFVGFVDRLIIIHKEMAAMKRDEHADAVRLMTI 593 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSR----RDDDRYLFLEAL 720 + + F VCL+G ++G+ P A Q+P + +++R L A+ Sbjct: 594 HKSKGLEFPSVCLIGASEGILPHTSALDAERRDDQRPLSDKEDKALDALEEERRLAYVAI 653 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 A+ +L IS G + S +++ Sbjct: 654 TRARDELVISSPGF--YRGRKAEVSRFFRDV 682 >UniRef50_UPI000185BEF4 helicase, uvrd/rep family n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BEF4 Length = 1119 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 90/888 (10%), Positives = 209/888 (23%), Gaps = 145/888 (16%) Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA------LPPVYLQALQ 228 + P + + F+ P L GI + Y Q ++ Sbjct: 175 ERLRPALPLVGFSRAVRDFLLRAAERGIDAPRLQQLGVDYGIESWCAAGKFMAEYQQTMR 234 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 D LA+ +D E + + + Sbjct: 235 --LAWEPSLNAAEIVSAALMELDADAQALARWGKSV--VLVDDAEHLSPEAARLVDRFVS 290 Query: 289 SDGEQDV-GNPLLASWGKLGRDYIYLLSDL-ESSQELDAFVDVTPDNLLHNIQSDILELE 346 + G+ + + G + YL + + + + ++ + + + Sbjct: 291 QAAVAVITGDEDQSVFHFRGANNDYLRGTGKAEYKAIHLQQSYRCNADIADLANAVSQRL 350 Query: 347 NRAVA---------GVNIEEFSRSDNKRPLDPLDS-----SITFHVCHSPQREVEVLHDR 392 +A A E N DS ++ + S + + + D Sbjct: 351 PKAPAYRGIAGSVGTQEARESEVGSNSETAAAEDSYAAKSAVKIAIHPSERAQRATVADY 410 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI-SDRRARQSHPVL 451 + D + +D+ V+V ++ A + +P I ++ Sbjct: 411 FRRLHI-DEGVAWKDMAVIVRSGAG-----ESSLFRALSRAGVPVQIDPTDIVLSHQRLV 464 Query: 452 EAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 A + L ++ + L P++ D Sbjct: 465 RALMVALRATMNQLDDVEWDEFLSGPLVNM-------------------------DPIVK 499 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 L + L+G + + L L L L Sbjct: 500 ERLLRGIRKADLFGGAAMTQLIGILKADGL----ATEQLELIESLSQRERQALQVPLDLL 555 Query: 572 NIWRRGLAQERPLEEWLPV----CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG-LGA 626 + R L W D L A L A+ A+ Sbjct: 556 SAAREALRDGVEATLWAIWQSTGLADHLVAASLRGGTAGASADRDLDAVMALFDFAGDRV 615 Query: 627 QYGDAVPLSLLRDELAQRL--DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 + + + + ++ R V I + +K V ++G+ +G Sbjct: 616 ELNPKLTVDGFIASVEEQELPIGARDRSGVERDAVRILSAHAALGRQWKAVAVVGVQEGQ 675 Query: 685 YPRQ------LAPLGFDLMSQKPKR------GDRSRRDDDRYLFLEALISAQQKLYISYI 732 +P + F + ++R L A+ A ++ ++ + Sbjct: 676 WPSLGVTGSVMKQNEFIGLVDHGIEPREYINSMADALAEERRLLHVAVSRASDRVLLTAV 735 Query: 733 GRSIQDNSERFPSVLVQELIDYI------------------------------------- 755 PS + EL++ + Sbjct: 736 DSPDDVG---VPSPFIIELVEKLGNSATELAKQSEASSAANGVGATANEANVGKPDVAEA 792 Query: 756 --GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR-EWLPAASQ 812 L+ + A ++A + Q + R + + Sbjct: 793 EDVAWAGEGLPRVLSVESLLAELRAAVVDDAETETRRRQAARQLARLAQVEVAGAHPDTW 852 Query: 813 AGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL 872 G +P+ P + ++ P++A Sbjct: 853 WGLRAPSTSKPVNDKKPMRINPSKVEATLNCPLKAMLDK-----------------SAPT 895 Query: 873 EGLSRYQINQQLLNALVEQDDAERL---FRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 + + Q + A+ + RR ET ++ Sbjct: 896 SAMYLGSLLHQAVEAVAKGVTVPEAQSEIRRVFGDLSDDPEWRKRTEEETWLTGLEDWQR 955 Query: 930 RVIACRQPGQSMEIDLAC-NGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 + + G + + + + + I G + ++ D + + + Sbjct: 956 WIETKKDIGTEVPVKVNINDDIVIVGRIDRLIEDADGAVQIVDIKTGK 1003 >UniRef50_A7HA18 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID=A7HA18_ANADF Length = 1196 Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats. Identities = 104/891 (11%), Positives = 216/891 (24%), Gaps = 152/891 (17%) Query: 194 IETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKD 253 + L+ A + G++A L L A + + + Sbjct: 289 LRELKDALAAAAEELGPLAAEGLAAATKEELCLLVAEAEARYAATKRAARAVDFDDLLVR 348 Query: 254 PAYLAK--------LLTRQRRHSFEDRELPLFRDSENAGQLFNSD-----GEQDVGNPLL 300 L + L R R ++ + E L VG+ Sbjct: 349 ARDLLRHDGALRAELRARYRALLVDEYQDVNGVQQELFELLSGPGGPAGPLLVAVGDLKQ 408 Query: 301 ASWGKLGRD---YIYLLSDLE--SSQELDAFVDVTPDNLLHNIQSDIL-------ELENR 348 + + G D + L+ LE + L + + + +++ + Sbjct: 409 SIYRFRGADVAVFARLIRRLEAGDGRVLHLSDNHRSAPAVVELVNEVFARCMRPPDGAPP 468 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHS------PQREVEVLHDRLLAMLEEDPT 402 + + R +RP + +RE + R+ A++ Sbjct: 469 RDDEIRFSDADRLVPRRPEGARPACELLEDHEDGNAAERRRREAGAIARRIRAVVSGAAG 528 Query: 403 L----------------TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 + D+ ++ + + A +PY ++ Sbjct: 529 VAVRERGEGGAERVRRPRLSDVAILFRRLTQIGEY-----ERALRAAGIPYRLARGGGFY 583 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 P + LL+ + A+L P+ + Sbjct: 584 QAPEVRDLGELLATLADPSDAIGWAAVLRSPMCGVS--------------------DATL 623 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 L A LG A + + L Sbjct: 624 FLLARAGLARLARVSPERLAAEVARALGEGGAGALAPEAAERAVASVPAEDWARLTRLLD 683 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 +L+ R LA + L + L+A L + E + + G+ Sbjct: 684 AWRELHALRDRLAPDALLTRAVERLD--LDAVLLAGPDGERRAVNVAKAIALAARF--GS 739 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 G A L+ A R +E ++ V + T+ + + + VV + + G P Sbjct: 740 DGGTAAELARHLRAQASRPPREPEAEVEAGDAVALLTVHQAKGLEWPVVFVPDL--GARP 797 Query: 687 RQLAPLGFDLMSQKP---KRGDRSRRDDD-------------------RYLFLEALISAQ 724 R A + + + R ++ R L A+ A+ Sbjct: 798 RSDARRALLDAEGRLCAMRYDPAADRFEETASVRDARAHERRAAAAESRRLLYVAMTRAR 857 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 +L +S + A + L Sbjct: 858 DRLVLSGEASNG-----------------------------AESWRGLVEVAAEARAELV 888 Query: 785 TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHP 844 R+ + P + PA ++ + P V + L + P Sbjct: 889 RRIALEEAGSAPACGPPVDGDDAPAPAEPPAVAPPRLAGAPRVAAVRVAVTELAEYARCP 948 Query: 845 VRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL-NALVEQDDAE---RLFRR 900 R L + P +P +R + +L A + E +L Sbjct: 949 RRHLLGRVLGLPEPHGARGAPADDPG--RATARGTLAHAMLAEADLAAPPLERRAQLAAA 1006 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC-----------NG 949 G P + R +A + ++ Sbjct: 1007 AARRGYDPRSPGVRRILGEVARFANAEGGRALAEAARDGRLRREVPFLLRLPSRTRGDPS 1066 Query: 950 VQITGWLPQVQPDGL------LRWRPSLLSVAQGMQLWLEHLVYCASGGNG 994 V + G + + D + ++ + + L+ L Y + Sbjct: 1067 VYLVGAIDALMVDRRARALTVVDYKYATWRPDAADRYRLQLLAYVLAARRA 1117 >UniRef50_C6LEN7 ATP-dependent helicase PcrA n=2 Tax=Clostridiales RepID=C6LEN7_9FIRM Length = 604 Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 65/591 (10%), Positives = 148/591 (25%), Gaps = 107/591 (18%) Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA-----LPPVY 223 ++ L E + A + L + G+ + Y Sbjct: 109 YRILREIISPMDIGIEDEAEFLHDTAREISRVKNERIPL-EHYYAAGVPQELFRKIYGSY 167 Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDI-KDPAYLAKLLTRQRRHSFEDRELPLFRDSEN 282 + ++ GK L+ W + P L R R ++ + + Sbjct: 168 CRGMERAGKLDYDDLMVYT-----WELLSARPDILEGWRKRFRYILVDEFQDINRLQYDI 222 Query: 283 AGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD 341 L + VG+ + + G +L+ F P + + Sbjct: 223 IKLLAAPENNLFVVGDDDQSIYRFRGAKPEIMLN----------FPKDYPQARQLLLDRN 272 Query: 342 IL---ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 + + A ++ + + + + ++E + R+ L Sbjct: 273 FRCPGNVCDLAARVISRNTVRYEKKIEKVKADGLPVEKLLFRNQEQESLGIIQRIRQGLA 332 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA-RQSHPVLEAFISL 457 + D V+ V + +P+ + D H + I+ Sbjct: 333 QGR--RYEDFAVLYRSNTDAG-----VLSQKLLEYNVPFKMRDTLPNLFEHWISRQVIAY 385 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L L + +VL +++ P + I L + + + +R ++ Sbjct: 386 LKLAHGDYSCANVLKIINRP----KRYIERSCLDTQQVDFERLRMYYEDKYWVIRRIDK- 440 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 L + + Q + L L+ + Sbjct: 441 ------LEQDLAALARMQPYAAVQYIRHGIGYEQYLEEYAEYRKIKAEDLYEVLDRLAQS 494 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 E W + Sbjct: 495 AKGYETCEAWFAYMEEY------------------------------------------- 511 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 ++ L ++ + V + TL + + F V L+ +N+G+ P Sbjct: 512 ----SEMLKEQAKNGAQKQDCVTLTTLHSAKGLEFPFVFLIDVNEGIIP----------- 556 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 K S +++R +F + A ++L I + PS + Sbjct: 557 --YKKALLASDVEEERRMFYVGITRASEQLTI--CVLKEKYGKSLKPSPFL 603 >UniRef50_C5VUD6 UvrD/REP helicase n=1 Tax=Clostridium phage D-1873 RepID=C5VUD6_9VIRU Length = 597 Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 56/487 (11%), Positives = 138/487 (28%), Gaps = 91/487 (18%) Query: 262 TRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ 321 ++ + +E L S V + A + G + + Sbjct: 192 YNFDYILVDEHQDSNLIQNELIKLLCPSKNIFCVFDYRQAIYTFRG----------GNPE 241 Query: 322 ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL-----DSSITF 376 F P+ + N+ ++ N + D + D + +I Sbjct: 242 YCMNFKHEYPNAQIINLDTNYRSCANIVNNANKFIKRYYGDYEYYSDSNASLLQNGNIQI 301 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 + + E + + + ++E L DI ++ ++SYS I + R +P Sbjct: 302 YNNEKQEDEAVKIVNEIEKKIKEGENL--EDIAILYR-LNSYSIHI----ENELKRRDIP 354 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 Y I + + +E +S L L ++ Sbjct: 355 YYIDNNGSFFKRKEIECILSCLRLVENPHDD----------------------------- 385 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 +D +++ + + ++ SA + + Sbjct: 386 -------GAVDMLLRYRPYPFTYIRNSTKENIRKL-------SAMNGLSLFQSFTLVNSS 431 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLN--AFFLPDAETEAAMTLIEQ 614 + +L +N +E+ L+ + +L + + + + Sbjct: 432 KKWELNNLKEFENIINRLNLQYKKEQNLKMLVDNIIKLLKLEDYIKNNYTNQEEIIDRLN 491 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 + + G LS + + + V + ++ + + FK Sbjct: 492 SLNSFKSFIKGD------NLSNFITYIYS-DEDNNKKAKQKEDKVQMMSIHKSKGLEFKN 544 Query: 675 VCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 V ++G+ DG +P ++ ++ LF + ++ LY+S I + Sbjct: 545 VFIVGIEDGKFP-----------------NKKTNLIEEARLFYVGVTRPKENLYLSQINQ 587 Query: 735 SIQDNSE 741 + E Sbjct: 588 GNKFIEE 594 >UniRef50_C5VEC7 Helicase, uvrd/rep family n=2 Tax=Corynebacterium matruchotii RepID=C5VEC7_9CORY Length = 1079 Score = 157 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 103/870 (11%), Positives = 217/870 (24%), Gaps = 135/870 (15%) Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 + G A + F+ P L G P+++ A + L ++ Sbjct: 185 EECRDGIVMVGFARGLRDFLLRTVERGLGPEDLERL----GEEHHRPMWVAAGKFLREYE 240 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTR--QRRHSFEDRELPLFRDSENAGQLFNSDGE 292 ++ L ++ A + +D + + +E + + Sbjct: 241 QVMSLGGTHSLS-ASELVSMALEHDVPPEISYSTVIVDDAQHLDPKSAELVARFIDQANF 299 Query: 293 QDV-GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 + G+P + + G L EL Sbjct: 300 AVIAGDPDQSVFRFRGARPQ-FLQHHPVDHELRLHTSYRVQA------------------ 340 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 P + FH S E + DR+ D + RDI V+ Sbjct: 341 ----------------RPGAPGVHFHRADSTGNMFEFVADRIRRARLIDD-VQWRDIAVV 383 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 V + +P A +P I ++ A I + ++ Sbjct: 384 VRSVGMITPI-----RRALLAAGVPVHIDPTDIVLSQQRIVSALILAVRAVHHGLTLAEL 438 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 L P+ A LR LRQ + R + A Q R L Sbjct: 439 EELALGPIGGADAVTLRRLLRGLRQV------------ELRRTGAVAAAFQTPTRRSLEV 486 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 + + + L +L ++ Q +EE L Sbjct: 487 LSELVLEPEPDPGL--------VAEVEQVLTDREQDILGRIRQVIAAGRQGGSVEEVLWE 538 Query: 591 CR------DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA-QYGDAVPLSLLRDELAQ 643 L+A + + A+ + + + + Sbjct: 539 IWSATNLDKHLSAVSMRGGAAGSQADRDLDAVMALFDAAGDWVERRPNSTIDAFITHIEE 598 Query: 644 RL--DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 + R + + VNI T + V + G+ + +P + Sbjct: 599 QELPTGVRDRRLVVPDAVNIVTAHATSGQEWHTVIICGVQEDSWPSLSETGTLFGQEELV 658 Query: 702 KRGDR------------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 D + ++R LF A A L I+ + + PS V+ Sbjct: 659 DLIDDGIAPGTTIARVTEQLREERRLFHMATSRATNTLIITAVD-DPDAAEPQEPSRFVR 717 Query: 750 ELIDYIGQSHYLPGDEALNCDESEA----------------RVKAHLTCLHTRMPFDPQN 793 + + E + ++ + + +N Sbjct: 718 DYMQPDSPEDPWEPQERVVGEQQIDVDNPLTYTRLLSAPAIVAELRRVVTNPDETQRARN 777 Query: 794 YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRL 853 + A +P A ++ ++ A P+RA Sbjct: 778 QAARQLARLAEAGVPGAHPDQWWGIAGPSTTRSLPVSSLSPSRIEAGMACPLRATMSRIF 837 Query: 854 QVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE-------RLFRRFRAAGD 906 TE ++ L R ++ A+ D++ ++ AA Sbjct: 838 -------------TEEELVFPLLRGRLLHAFAEAVALNVDSDVARLKIMDAYQEILAAPI 884 Query: 907 LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC-NGVQITGWLPQVQPDGLL 965 + + + + Q G +E ++ G+++ G + +++ Sbjct: 885 WLRSHRLDTWRTVLDRTKMWIETHRHIFEQVGVEVEAEVTIAEGMKLRGRIDRLEKTMDG 944 Query: 966 RWRPSLLSVA------QGMQLWLEHLVYCA 989 + + + ++ L Y Sbjct: 945 DYHIVDFKSGTNHPSEKTIADHIQLLTYQL 974 >UniRef50_C6J3M4 UvrD/REP helicase n=2 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3M4_9BACL Length = 732 Score = 157 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 64/552 (11%), Positives = 142/552 (25%), Gaps = 99/552 (17%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 + L + R ++ + +L V + + + G D Sbjct: 228 NEGVLRRYQRRYDYVLTDESQDTSRVQHAIIEKLVQQHRNLCVVADDDQSLYSWRGADPA 287 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV-AGVNIEEFSRSDNKRPLDPL 370 YLL+ F V P+ L+ ++ + A I+ K+ Sbjct: 288 YLLN----------FKQVYPEALILFMEQNYRSTPEIVNVANTLIQRNQDRYPKKMFTEN 337 Query: 371 D--SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 I +V+ L + + + ++ ++ + S + Sbjct: 338 PPHKPIEIRHLDDYSDQVKYLVNEIQQIKN------FAEVAILYRNNSS-----SIALMN 386 Query: 429 APADRYLPYAISD-RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 +P+ + D SH V+E ++ + + + + Sbjct: 387 EFDRAGIPFYMKDADNRFFSHWVVEDILNFMRMTFTDKRPDI------------------ 428 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L + I + + L + + L R+ L + Sbjct: 429 --LEKIH-----LKFNGYISKEQMAALLKIRNEESVFDNLLNRVPLKDYQVKQLQMCKET 481 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 L + + R L E+ LE+ + Sbjct: 482 FQ-----------EMKGMPPLHAIRVIRDRLGYEKALEKICEWKGFRMEYLLG------- 523 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 I + I AE + + L L + V T+ Sbjct: 524 ----ILNTLEEIAAELATMEE-----FAARLKYLESIL--RTARTKRGQNAVTFSTMHSS 572 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F+ V ++ + +G+ P + D+M ++ LF + A++ L Sbjct: 573 KGLEFERVYMIDLVEGIIPSKADKENTDMM------------EEATRLFYVGMTRAKKHL 620 Query: 728 YISYIGRSIQDNSERFPSVLV-----QELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 + + D +E S V +L G+ + L Sbjct: 621 ELLTYKKR--DGAEVTESRFVAYVRYIQLPPQAGEPSSATSPSIPVPAQDNPNAIRRLAE 678 Query: 783 LHTRMPFDPQNY 794 L + + Sbjct: 679 LREGESIVHRAF 690 >UniRef50_D1BXK8 UvrD/REP helicase n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BXK8_XYLCX Length = 1192 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 109/876 (12%), Positives = 198/876 (22%), Gaps = 149/876 (17%) Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLES 319 R R ++ + + E LF VG+P + +G G L+ Sbjct: 331 RARFRVVLLDEYQDTSYAQVELLAGLFGGGHAVTAVGDPHQSIYGWRGASASG-LARFPE 389 Query: 320 SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVC 379 L + ++D L +A + + + Sbjct: 390 RFRHADGAPAGVRYLSTSWRNDAAVLAAANIASAPLRAELTTHVPPLDLRPGAGAGVVSA 449 Query: 380 HSPQREVEVLHDRLLAMLEED---------PTLTPR---DIIVMVADIDSYSPFIQAVFG 427 H + L E P P V+ ++ Sbjct: 450 H--------VATTLEEEAEAAAEWVAERWRPGTHPHGRVTAAVLCRKRSQFA-----AVE 496 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A R LP + S P + ++LL + +L LL P + Sbjct: 497 VALRRRGLPVEVVGLGGLLSTPEVVDVVALLEAVHDPSRGDSLLRLLTGPRVNLGAADLH 556 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG------YAMESAQ 541 E R + A + ++ G +++ Sbjct: 557 ALGSRAADLAREDDPRRAAGRAHSDGDAPAAPDGGSGEADDLAVVEGDVVDHRSLVDALD 616 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 Q + L LA+L L R GL E + R + + Sbjct: 617 DLPQPGRAARDGRVLTPAGHTRLAALRSVLRSLR-GLTYLSLPELVVQAERALGLDVEVA 675 Query: 602 DAE---------TEAAMTLIEQQWQAIIAEGLGAQYG-DAVPLSLLRDELAQRLDQERI- 650 A+ E + A DA L L QER Sbjct: 676 TADAVATLVPDAGERVSRRGREHLDAFRDVAATFAQSADAATLGAFLAWLGVAQKQERGL 735 Query: 651 ---SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY---------------------- 685 + V + T + + + VV + G+ DGV+ Sbjct: 736 DLPVREPDPDAVQVITAHAAKGLEWDVVAVPGLVDGVFPTIAEAANGQRAESAWLTDVAA 795 Query: 686 -PRQLAPLGFDLMSQKPKRGD-----------------RSRRDDDRYLFLEALISAQQKL 727 P L DL + + + ++R L A A+++L Sbjct: 796 LPYPLRGDDADLPAFRWEAAVDTKELDGLRGEFRAACGEHALAEERRLAYVAFTRARREL 855 Query: 728 YISYIGRSIQDNSERFPSVLVQELIDYI---GQSHYLPGDEALNCDESEARVKAHLTCLH 784 ++ + R S + EL++ D A + + V A + Sbjct: 856 LLTAHWWGTSS-TPRRLSPFLVELVEVGLVTADGWTAAPDAADSNPRDDVEVTASWPAVD 914 Query: 785 TRMPFDPQ---------------------NYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 P+ G A + ++ A + Sbjct: 915 DVEVGSPRDVLRATAALVDAAATDRAAHAVAADGVLVDAAGHDIVELARILLAERDERSG 974 Query: 824 LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 +P V L R Q L+ E + R + Sbjct: 975 HEVEMPAHVSASGLVRLATDRDEFALQ--LRRPVPAEPTV----------HARRGTRFHE 1022 Query: 884 LLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEI 943 + + A G + + L ++ Sbjct: 1023 WVEQQFASSALFDVDDLPGADDGDLPGDADLDVLKE-----KFLVSEWADRTPIAVEQDV 1077 Query: 944 DLACNGVQITGWLPQVQPDG---LLRWRPSLLSVAQGMQL-----------WLEHLVYCA 989 + G+ + V D + + L + Sbjct: 1078 ETPLAGIMTRSRMDAVFADPDGEPGSVVVVDWKTGRPPTDTAARAAREVQLAVYRLAWSR 1137 Query: 990 SGGNGE-----SRLFLRKDGEWRFPPLAAEQALHYL 1020 G + ++ R LA E L L Sbjct: 1138 WTGLPLDKVSAAFCYVATGETVRPERLATEAELEAL 1173 >UniRef50_C1F7R1 ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7R1_ACIC5 Length = 943 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 48/412 (11%), Positives = 108/412 (26%), Gaps = 29/412 (7%) Query: 144 DWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTC 203 + L G ++ Q L K ++ + R L + Sbjct: 102 EALRIGNEGLTKTFAIYDESDQQSLVKQIMRRMGLDDKQLTPRVVLSKISWAKNHMIDPQ 161 Query: 204 PPGLPSRVFICG-ISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLT 262 L S + ++ + Y + L+ LL + Sbjct: 162 EYYLQSSDPVAERVAHIFEAYRKDLRKNNALDFDDLLLEAVRLL----KSSAEVRERYNR 217 Query: 263 RQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ 321 R + ++ + E L S VG+ + + G D +L Sbjct: 218 RYQYLLIDEYQDTNRPQYELMKLLAGSRHNVCVVGDEDQSIYSWRGADIRNILE------ 271 Query: 322 ELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHV 378 F P+ ++ + + A A V+ E + + S I F+ Sbjct: 272 ----FEKDFPNAQTIRLEQNYRSTQVILEAAGAVVSRNEQRKGKSLWTSREGGSLIGFYE 327 Query: 379 CHSPQREVEVLHDRLLA-MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 + E + D + + + + V+ + A + Y Sbjct: 328 APDGENEALFIADSIQKYLRKAGESAEQPRAAVLYRTNSQ-----SRLVEEALRRYGIRY 382 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 + + ++ +S L L + S + +++ P I + + L + Sbjct: 383 TMVGGFSFYERAEIKDLLSYLKLVQNPNDSIALQRIVNTPA----RGIGKTTMETLERIA 438 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 E+G +L + R++ A + + Sbjct: 439 LETGTSTWNGIVRALREKLLPSRALVALDTFVRLIEDARALLAPDFAEKLAA 490 Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 60/201 (29%), Gaps = 20/201 (9%) Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 R L E + D + E + + + AQ Sbjct: 603 DPHAAAFRKPGDPATLPELIKFLIDRSGYIRALEEEATPEAFSRIENLKELANAAQDAQE 662 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 L+ D A D ++ V + TL + + F +V L GM +G++P Sbjct: 663 RGET-LNEFLDHAALVSDTDQFDADA---RVTLMTLHAAKGLEFPMVVLAGMEEGLFPHS 718 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN----SERFP 744 D ++ +++R L L A L ++ + P Sbjct: 719 RT------------LTDPNQMEEERRLCYVGLTRAMDSLILTRARYRRRYGNDMPEASTP 766 Query: 745 SVLVQELIDYIGQSHYLPGDE 765 S ++E+ ++ ++ Sbjct: 767 SRFLEEIPAHLLENLGGTPAW 787 >UniRef50_C6B123 Double-strand break repair protein AddB n=19 Tax=Rhizobiaceae RepID=C6B123_RHILS Length = 1064 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 109/922 (11%), Positives = 237/922 (25%), Gaps = 117/922 (12%) Query: 77 LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFD 136 L + + ++W+ LP+++ L + L+ A+L D Sbjct: 106 LSNTARLLELARLILAWR--NKLPEIVRHIHSD---SPLVAPASPADAIWLARNLAELID 160 Query: 137 QYLVYRPDWLAQWETGHLVEGLGEAQAWQA-PLWKALVEYTHQLGQPRWHRANLYQRFIE 195 + D W ++ A WQ + + +++ + Sbjct: 161 --SIETEDL--DWSELSKLDTGDYAAWWQLTAEFLQIASAFWPERLAELGKSSPARHRNA 216 Query: 196 TLESATTCPPGLPSR--VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKD 253 L + + + I G + P + A+ E G I Sbjct: 217 ILRAEASRLSATKPAGPIIIAGSTGSVPATADLIAAVAHLPE-------------GVIVL 263 Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 P + R + + + + Sbjct: 264 PGLDLSMPERHWQMVAPEPAPGQHANPASRSHPQYGLSSLL------------------- 304 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS 373 D + P+ L + + A A + + L S Sbjct: 305 --KRLKLTRADLTLLDRPEADLERRAEILSQALAPAEATSDWGAWKTDLPAGALSSSFSD 362 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 ++ + + E + L LE + ++ D + + + + Sbjct: 363 VSLIEAANEREEATAIAIALRLALERPGQDSESRAALITPDRN-----LARRVMAELSRF 417 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 + S + P LL +++LL P+ ARF + L Sbjct: 418 GILADDSAGTPLSAMPQGTLLQLLLEAALRPGDPVAIISLLKHPL--ARFGLERGALISA 475 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + + +R G+ + ++ LE P L R + + ++ + Sbjct: 476 TEALELLALRGGVAEVDISTLE-PLLAHQLAEQALDRHAPQWRKALSP---EAADAAYDL 531 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 + + + LAS LM+ RG L EW L A + A + E Sbjct: 532 ARRVTQATEPLASALMRERPEDRGRTARFTLSEWAKRTGRSLEAVAVDPHGNLADLWSNE 591 Query: 614 --QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PVNICTLMPMRSI 670 A++ E + D +A + R L+ + I + R Sbjct: 592 AGDALAALLGEVIDTDGQMEADGPQWIDIMAALAAGHAVKPRALSHPRLFIFGTLEARLQ 651 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA--LISAQQKLY 728 + L G+N+G +P Q A F K + G +R + A A + Sbjct: 652 SVDTLILGGLNEGTWPGQTANNPFIPRMMKTEIGLEPP---ERRIGQLAHDFEMANGTRH 708 Query: 729 ISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP 788 + Y Q ++ S +Q L+ G++ N A + Sbjct: 709 LIYSRALRQGSTPTVASRWLQRLLALGGEAFEAELKGRGNRFLQWAALIDRGDAQAPAQ- 767 Query: 789 FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAF 848 +P P++ + R P + Sbjct: 768 -----------------------------RPSPKPPLALQPKSYSFSEVGRLRRDPYAIY 798 Query: 849 FQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD----DAERLFRRFRAA 904 + L+++ + P R + ++++ + + + Sbjct: 799 ARRVLRLDPVEPFNRDP-------GAAERGTLYHKIIDRFIREAHIAGTPDAAAAMEAIL 851 Query: 905 GDL-----PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN------GVQIT 953 +L ++ + + R ++ +++T Sbjct: 852 SELFDMEKLPPHIDAVWRPRFRAVARAFLEWEAGRRHGILKTLTEVRGGMELEPINIRLT 911 Query: 954 GWLPQVQPDGLLRWRPSLLSVA 975 G ++ G Sbjct: 912 GVADRIDVTGPHSADIIDYKTG 933 >UniRef50_B0MQS7 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQS7_9FIRM Length = 1235 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 71/713 (9%), Positives = 172/713 (24%), Gaps = 93/713 (13%) Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGR--DYIYLLS 315 + ++ + E L + VG+ + +G G + Sbjct: 381 RERADFSLIIVDEFQDSNKLQYEIFKMLTENKQGLYFVGDIKQSIYGFRGAQPSVFSAIC 440 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILEL--------ENRAVAGVNIEEFSRSDNKRPL 367 + +L + + + + + + + + A G I + + Sbjct: 441 KSDDFDKLPLNENFRSNRCVIDGINTLFDRMMTEENGGVDYAENGRLICGLEKDSDSPIS 500 Query: 368 DPLDSSITFHVCHSPQR----EVEVLHDRLLAMLEED-------PTLTPRDIIVMVAD-I 415 D + + + E + R+ M+ + T D +++ Sbjct: 501 DEDKTEVCIVSEKDRKNAVVTEAAYIAARIKQMIAQGYKVGSDKRPCTEDDFAIIMRSPK 560 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 + + ++ + L + R P + +SLL + + + ++ +L Sbjct: 561 NRIADYV-----NVLTANGLNVTYNQRAVLLDRPEIRLMLSLLKVINDPYNDTELAKVLM 615 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL-----TR 530 P+ + T + + L +G D +R ++ + Sbjct: 616 SPL----YCFTADDMARL------RTGTFGFDISKIRAECADELEKYCLGTKEIVGMKRK 665 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 L M++ +G S + A + L+ +R P E + Sbjct: 666 PLYSCVMQAVRGYDTSEYEKLHELTKDIKPDAKCAVFVNDLDSFRNAATASSPQELIRNI 725 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 + L + A + + E + G L L L + Sbjct: 726 YDRISADELLSVGDDPATRQANLELLVSYAREYSDYKDGGT--LGDLIFNLEN-MSSLTA 782 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS------------ 698 +Q V I + + + F VV + Sbjct: 783 AQTAGGHGVKIMSTHMSKGLQFPVVFVANCASSFNDDDYTGDVVISEEYAVASKSVDIST 842 Query: 699 ----------QKPKRGDRSRRDDDRYLFLEALISAQQKLYISY--------------IGR 734 + + ++ L A A+ KL + + R Sbjct: 843 MSKIQSPAYHAAAQEVKKQLESEEMRLLYVAATRAENKLIFTANISKACDEYMSVLDVNR 902 Query: 735 SIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 + + + S + LI+ + D + + Sbjct: 903 AGKKVGKCSGSSYLSWLIEVLSAECDKVNDMQSGIIDYGDVRYIFYPLAYEGDEHSLTIP 962 Query: 795 QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMR-- 852 A E+ + + Q + + + Sbjct: 963 ALNTGAENADEYTDDKNNDSTDIAVDEQFRSELEKKLNAAYAYEPLTKISAKFTATELAA 1022 Query: 853 -LQVNFRTE--------DSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER 896 L+ E S + + L G R +L+ + + Sbjct: 1023 NLREKNGEENYGLFIGKPSFLTENNTGKLSGKRRGDAYHKLMEHIPFEKILSE 1075 >UniRef50_Q8RCZ0 ATP-dependent helicase/nuclease subunit A n=3 Tax=Thermoanaerobacteraceae RepID=ADDA_THETN Length = 1204 Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats. Identities = 70/853 (8%), Positives = 203/853 (23%), Gaps = 180/853 (21%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD--GEQDVGNPLLASWGKLGR 308 + + ++ + ++ + + + VG+ + + Sbjct: 371 LSNEEVVSYYREKFEEIFIDEYQDSSLIQEAILSLIARDNPPNRFMVGDVKQSIYRFRQA 430 Query: 309 DYIYLLSDL------ESSQELDAFVDVTPDNLLHNIQSDILEL-------ENRAVAGVNI 355 + ++++ + + + + + I E E + Sbjct: 431 NPYIFFEKYTSYSQEGENKKILLYKNFRSRKEIIDAVNYIFEKIMSKNIGEVDYSEEEKL 490 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCH---------------SPQREVEVLHDRLLAMLEED 400 + ++ + ++ H+ Q E V+ +R+ + E Sbjct: 491 NYGANYESNPFEKENERTVEVHLIEREREEEFEEDEEILDDMQVEAHVVGERIKGLFREG 550 Query: 401 -----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 + RDI V++ + ++ F +P Sbjct: 551 FKVYDKEIGGYRPVEYRDICVLLRATEKWA----YAFEEEFVKMGIPVFADTNAGYFDTA 606 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 ++ +SLL + D+ +LA+L P+ + Sbjct: 607 EIKTMLSLLQVIDNPMQDIPLLAVLRSPIFS----------------------------- 637 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 F ++ ++ ++++ EL + + L Sbjct: 638 ----------------FTEEELVDIRLEDADGTIYEALKKASLRED---ELGEKVRNFLD 678 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 L W+ E + + ++ + E + Sbjct: 679 SLKRWQEKSIYMPVDEFLWYLYEETGFYSYVGAMPQGVERQANLRVLFERAKEYEETSFK 738 Query: 630 DAVPLSLLRDELAQRLDQERISQ--RFLAGPVNICTLMPMRSIPFKVVCLLGM------- 680 + L ++ V + ++ + + F +V + G+ Sbjct: 739 GLFNFVNFINRLRTTSTDMGSAKTVGENENVVRVMSIHKSKGLEFPIVIVAGLGKQFNTK 798 Query: 681 --NDGVYPRQLAPLGFDLMSQKPKRGDR-------------SRRDDDRYLFLEALISAQQ 725 N+ + +G + + + + ++ + AL A++ Sbjct: 799 DLNEKILYHHFLGIGPEFVDYRRRLSYPSIVKEAIKYKIKLESLSEEMRVLYVALTRAKE 858 Query: 726 KLYISYIGRSIQDNSER----------------FPSV-LVQELIDYIGQSHYLP--GDEA 766 KL + + I++ +++ S + + + + L + A Sbjct: 859 KLILVASVKDIKERAKKWGKAKLLGKKISEYDVLKSRSYIDWIGSALIRHRDLKLLREFA 918 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF------ 820 E E + + + + + R + Sbjct: 919 EISPELEQDSSKWEVKIWNKRDVIIERKKDEGIEVLERLNALNLEGLHTEFRKEVEERLN 978 Query: 821 ---VQPLPFTLPETVPLETLQRFWAHPV------RAFFQMRLQVNFRTEDSEIPDTEPFI 871 LP + + ++R V F + L+ E Sbjct: 979 YVYPYDRSSKLPAKLSVTEIKRILNDEVIDEETTSIFERRVLKTPLFLEKKR-------G 1031 Query: 872 LEGLSRYQINQQLLNALVEQDDAE-----RLFRRFRAAGDLPYGAFGEIFWETQCQEMQ- 925 L R ++ L D + L E+ + + Sbjct: 1032 LTPAERGIAMHLVMQKLDLSKDLSYRGIKEQIKDMVKNEILTEEQAKEVDANKIERFFKT 1091 Query: 926 QLADRVIACRQPGQSMEIDLACNGVQI---------------TGWLPQVQPDGLLRWRPS 970 L R++ ++ + + + + +I G + + Sbjct: 1092 PLGKRLLKAKEVRREVPFHIKISSREIYRDLPEVYQEEFIAVQGIIDCFFEEEGELVLI- 1150 Query: 971 LLSVAQGMQLWLE 983 +E Sbjct: 1151 DYKTDYVENGKIE 1163 >UniRef50_B8I7B7 UvrD/REP helicase n=2 Tax=Clostridium RepID=B8I7B7_CLOCE Length = 708 Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 47/510 (9%), Positives = 131/510 (25%), Gaps = 87/510 (17%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIY 312 P L R ++ + L D V + + + G + Y Sbjct: 220 PQILDWYKKRYTYIQVDEGQDLSNIQFAILKLLSGPDGNIFIVADDDQSIYRFRGAEPQY 279 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA---VAGVNIEEFSRSDNKRPLDP 369 +L L F ++++ N + + + + + Sbjct: 280 ILDMSSEFNNLKLF----------RLENNYRSSLNIVDLTSKFIMKNDKRYLKSHKTKNK 329 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + + +++ ++ +L + +++ I ++ + + Sbjct: 330 RADDPFILSVENESGQSDIVLKKISELLTGNRSIS---IGILYRNN-----LSSILVADK 381 Query: 430 PADRYLPYAISDRRA-RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + + I R H +++ + L + +E + I++ Sbjct: 382 LQRNSISFRIRQNRLFFFRHWLVQEVCAFLMFSLDGYDTESFTKIC----FRMNRFISKT 437 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L Q ++ +Q Sbjct: 438 MLECALQG-----------------------------EERDNVIDRIINNHDLKPFQLTA 468 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 D + + S L + R L + D N F Sbjct: 469 MRDLKGEFASLAKKNPWSALEYIKNDFRYLESVKEYSSISGQSFDYFNRLFGILHGISVD 528 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 I + L + + + + + + TL + Sbjct: 529 CPTISAFLVRLQE-------------------LEKIFEAGGVQNDWEKNQITLSTLHSSK 569 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 + + V ++ M + P + + ++ +++R LF + A++ LY Sbjct: 570 GLEYDSVFMIDMINSEIPG----------DKVLENSEKITLEEERRLFYVGMTRAKKDLY 619 Query: 729 ISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 + ++ + PS+ + E++ + + Sbjct: 620 LLNPC--TLNDEKFMPSIFINEVVQLLQKD 647 >UniRef50_Q027B8 ATP-dependent nuclease subunit B-like protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027B8_SOLUE Length = 897 Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats. Identities = 88/691 (12%), Positives = 185/691 (26%), Gaps = 116/691 (16%) Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 + S+ + +++ +REVE + R+L + R+I Sbjct: 219 ATLARLGALDFSEEQVRGTRTRNALALIKAPGIEREVEEIARRILRQV---EGRPFREIG 275 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 V+V + Y+P ++A +P + HPV+ + + Sbjct: 276 VIVRAPEIYAPILRAT----LDRFGIPARFYFDEKLERHPVIRFLAGAMDAMLGGWEHGA 331 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 LA+ + A + V E R G+ + ++ + L Sbjct: 332 TLAV----LRLAPRFADFGVMDRFDFDVRERIPRSGLGELRSLLIDEDGQPRPYAERLLH 387 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 ++ A+E + + + + R RP +E Sbjct: 388 KIDSLAALEEWRALELAPRDWA-----------------ARFATLREIFKPARPADEITH 430 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG-DAVPLSLLRDELAQRLDQE 648 + + + + E A +G +PL + L + Sbjct: 431 ELALQY-----------RSQAAVLDLFDEALDEAAQALHGIRHLPLEDYWRAVKSILRLK 479 Query: 649 RISQRFL-AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG--- 704 + V++ + R VV + GM + +P+ F + + + Sbjct: 480 PLRLEDGRRNVVHVMSAHEARQWVLPVVFVCGMVEKQFPKFHQQDPFFGDAARCRLNGSG 539 Query: 705 -----DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 ++R LF A+ A +SY + PS+ +++L Sbjct: 540 IRVRTAAEFEREERMLFDAAITRATMLATLSYPEFDGR-GERNLPSIYLEDLD------- 591 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 + A S + + Sbjct: 592 --------------------------------LPAEDAVAVRPAPRARTGDSAPVEIRNA 619 Query: 820 FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 + + L+ F P + F Q L++ PD L+ L++ Sbjct: 620 QLLEYMRHRTAQLSPTALETFLQCPFQYFTQRFLRLK------TAPDRPEQRLDFLTQGN 673 Query: 880 INQQLL-NALVEQDDAERLFRRFRAAGD----LPYGAFGEIFWETQCQEMQQLADR--VI 932 + +L +E D LF R AA +P G E ++++ Sbjct: 674 VVHAVLAEWWLEPQDLAALFERVFAAQLKEKCIPPGYHTERLRNAMLDDLRRFTSEDPWP 733 Query: 933 ACRQPGQ-SMEIDLACNG-VQITGWLPQVQPDGLLRWRPSLLSVA------------QGM 978 Q + + V+I G + ++ R + + Sbjct: 734 KIAFRSQIETKFCFPLDDTVEINGRIDRLDTAPDGRTFVIDYKYSAAQRVKDKLKDASLL 793 Query: 979 QLWLEHLVYCASGGNGESRLFLRKDGEWRFP 1009 Q L L + ++ G + Sbjct: 794 QAPLYMLAAQHLNLDAAGMYYVGVKGGIEYA 824 >UniRef50_Q2B8I4 ATP-dependent DNA helicase, UvrD/REP family protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B8I4_9BACI Length = 686 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 66/535 (12%), Positives = 166/535 (31%), Gaps = 78/535 (14%) Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 +A+ ++ ++ YW +P L K + + ++ + E L Sbjct: 207 YEAIKENENLYDYDDLIVECYWLFRFNPDILKKYQKQFQYILCDEFQDSSKIQYEIIRML 266 Query: 287 FNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL 345 + VG+ + +G G +L+ F P+ + + Sbjct: 267 AEPNNNLCLVGDDSQSIYGFRGGTPSFLI----------FFDIYYPNCRKILMDINYRSG 316 Query: 346 ENRAVAGVNIEEFSRSDNKRPLD----PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 + +I + K+ + + + F + ++E + + + + ++ Sbjct: 317 QGVIGLADSIISHNEKQIKKKMRVVKVENNFDVQFSKPINSEQEADWIVEDIKE--KQAA 374 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA--RQSHPVLEAFISLLS 459 + R+I V+ AVF +P+ + SH V+ +SLL Sbjct: 375 GMPLREIAVLYRTHAVGR----AVFERLLL-SDVPFVTFGGSSETIYSHSVIRPLLSLLR 429 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + + SE ++ + ++ R + E + A Sbjct: 430 VATNLMDSEAIVDAAPILYISRREM------------------------EETVEEVVSAN 465 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 T + +++ A + + LL +L +GL+ Sbjct: 466 NGETPKDLFIQVINKIANK--------------------KNGFQQRHLLTKL-ECIKGLS 504 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 + + + + +N + + +TL ++ ++ E A + Sbjct: 505 KMTAPQAIRDIRKGTINYERQLELDERKTLTLHKEMLIELLEECEQASR-GFQSIKAFLS 563 Query: 640 ELAQR----LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 + + + E + + V + T+ + + F+VV +GM + + P +A Sbjct: 564 FVERVEEKNEEMEELRSQPDIEAVRLMTIHSSKGLEFEVVYAIGMIEKILPHSIALDT-- 621 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 + +++R L + ++ LY+S + S + E Sbjct: 622 NRKEDTNLSPEESLEEERRLAYVCITRVKKCLYLSAPK--TYRGEKAKVSRFLLE 674 >UniRef50_B1C9D6 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9D6_9FIRM Length = 1171 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 69/897 (7%), Positives = 205/897 (22%), Gaps = 195/897 (21%) Query: 190 YQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWG 249 Y+ I+ + + + L + + Sbjct: 315 YKDIIDVVHELYPHMKTIEQAIIDFD---------AYYSHLKSEKGVLEFKDT--EHLCL 363 Query: 250 DIK-DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR 308 I D ++L++ ++ + ++ + VG+ + + Sbjct: 364 KILEDEKAREEILSKFDYVFVDEYQDTNLVQEAIINKVIKENNLFTVGDVKQSIYRFRQA 423 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE---------FS 359 + L + + N + ++ +N + E + Sbjct: 424 EPEIFLDR------IKNYKKDEKINKTVYMNTNFRTNKNIITGINTLFEKIMSKKTGKIN 477 Query: 360 RSDNKRPLDPLDSSI---------------------TFHVCHSPQREVEVLHDRLLAMLE 398 +N+R + D I + + E+ + + ++ Sbjct: 478 YDENERLIAGRDEEIESKIEVHLINKDTAGVDSFDSELSELSTEENEITYIALMINNLIG 537 Query: 399 ED---------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 D + DI ++ ++ ++ +F +P Sbjct: 538 TDIYDPELKEYRKVKFSDICILHRSANTRIKNVKEIFN----KYSIPVTSEKEIEYFKTL 593 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 +E LS+ ++ +L+++ P+ Sbjct: 594 EIETIKDFLSIINNFKDDITLLSVMRSPIF------------------------------ 623 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 F + +L ++S++ + + L + ++L Sbjct: 624 ---------------NFTVDELLEIKISTRESHYYKSIMSFINKENVNITLKDKVKNMLK 668 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 +N + + + + ++ + E Sbjct: 669 VINDYSDRSLYTSVPDLISNIYEETNIMDYMSALPFGNIRVNNMKTLLIKANEYESFSNE 728 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN------DG 683 D + + VN ++ + + F +V L+G + D Sbjct: 729 GLYGFINFMDYAKIQSESGYAFSEDSENSVNFMSIHKSKGLEFPIVILMGCHKMFNMLDT 788 Query: 684 VYPRQLAPL----GFDLMSQKPKRGD------------RSRRDDDRYLFLEALISAQQKL 727 P L + + D ++ L AL A++KL Sbjct: 789 KKPIMLNKDLGICPSLIDLDNKYKVDSIFKICAKIVENNEILSEEMRLLYVALTRAKEKL 848 Query: 728 YISYIGRSIQDNSERFPS-----------VLVQELIDYIGQSHYLPGDEALNCDES---- 772 ++ + + + PS ++ ++ I + + + +++ Sbjct: 849 ILTAYSKDTKKLIDNLPSNITPYSVEFSNSYLEWIMQGILPNKIYEEENNIIYEDNNFIV 908 Query: 773 ----EARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 + L+ + D + + Sbjct: 909 YNNKIEDLLTELSTSYINQKDDDFYLDDKIINKIKDDLNFKYKNIVNTTIPRKAGVSSLK 968 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 + + ++ + E +L + I + + Sbjct: 969 NVDLLEVG-------------NNVINLSEAPKFK----QEKSVLSSAEKGNIIHFIFEII 1011 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQE---------MQQLAD-----RVIAC 934 D ++L + ++ I + QE + D +I Sbjct: 1012 ----DIDKLKKTENIKAEIDTQIREFINKKMIKQEEVDNIDINYIYNFFDSNIGKELIHS 1067 Query: 935 RQPGQSMEIDLAC-------------NGVQITGWLPQVQPDGLLRWRPSLLSVAQGM 978 ++ + + +LA + + G + Sbjct: 1068 KKIYRELPFNLALKAKDISEKWKDSEEEILVQGIIDLTFETKDGAMILVDYKTNHYN 1124 >UniRef50_A4ALD4 ATP-dependent DNA helicase n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4ALD4_9ACTN Length = 1033 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 91/852 (10%), Positives = 202/852 (23%), Gaps = 121/852 (14%) Query: 194 IETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKD 253 + L T L R G++ + L LG+ + D Sbjct: 156 VRRLRGFRTELRDLMMRCVEFGVTP------RDLAQLGERNDRPEWVAASAFISVYDAVK 209 Query: 254 PAYLAKLLTRQRRHSFEDRE----LPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD 309 +Y + + D + ++ + LL + G Sbjct: 210 ASYRDRHFDASELLAEAAALIAEGHYAAVDRLRLVIVDDAHELTEATISLLRALATRG-- 267 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKR---- 365 I ++ + +F P L + LE + + Sbjct: 268 -ITIIGFGDPDLTTGSFRGAQPGVLSRWAEQLELENCQTLFLSSVHRHSASLRSAVIDVT 326 Query: 366 ---------------PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV 410 + SSI +P EV + L ++ + V Sbjct: 327 QRVGVSGLIEQRKSMSVATEPSSIHSFQLSTPAEEVAFIARHLREKHVL-ESVPWSRMAV 385 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 +V S P + + + S R A + + I LL L R Sbjct: 386 IVRT-GSLIPSLARQLRTL---EVVTSVSSARSAVRDEFSVNGLIVLLELALER------ 435 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 L S G D ++R L+ Sbjct: 436 -----------------RTLDAASAVELLSSSVGGFDAVSLRRLKAALRH--------EA 470 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP- 589 + + Q Q++ + + + A++ L+ A +EE L Sbjct: 471 LGAEIYDSADQLIAQALAAPAGFTSIETRVSRQAAAVAKNLHETAAAGAAGDTIEELLWG 530 Query: 590 ------VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR-DELA 642 + E A ++ + + P ++ + L+ Sbjct: 531 AWQRSGLADRWFTQALGSGVVAEEANRHLDAVVALFSSAKRFVERRPDAPANVFLTEWLS 590 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 + ++ ++ R + V + T + F VV + G+ + V+P P+ Sbjct: 591 ADVAEDTLAARSIVDSVTVGTPASVIGQEFDVVVVAGVQENVWPNLRVRGSLLGAHDLPR 650 Query: 703 RGDRSRRD----------DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 + D+ +F +A+ A +++ ++ + + + PS + + Sbjct: 651 VLAGEKLAVADRRREVLHDELRMFAQAISRATREVLVTAV-----EGDDNMPSPFLTLIP 705 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 + T + E A + Sbjct: 706 S--PDEPVRARPPLSLRGLVGVLRRELTTSANPGAAASSLARLAREGVPGADPSSWYGLR 763 Query: 813 AGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL 872 + + V V ++ F + P+ Sbjct: 764 SPSTTAPLVDLSEPDAKVRVSPSRMESFESCPLHWAIDQL--------------GGSTSN 809 Query: 873 EGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC-----QEMQQL 927 + + + + + ++ + A + E Q + Sbjct: 810 TASNLGTLIHGVAETATDFNAEALFKAVEDRWSEMSFEASWQSEAEKLRAKKLTQHLATY 869 Query: 928 ADRVIACRQPGQ--SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ------ 979 A M L ++G + +V+ G L + Sbjct: 870 LRDFTANGGELISNEMGFTLPLEQALLSGKIDRVEMYGGTTAVIVDLKTGKNEPSTDKAV 929 Query: 980 -LWLEHLVYCAS 990 + Y + Sbjct: 930 ADHPQLAAYQLA 941 >UniRef50_B8HBQ6 UvrD/REP helicase n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HBQ6_ARTCA Length = 1115 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 137/989 (13%), Positives = 245/989 (24%), Gaps = 139/989 (14%) Query: 58 ANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSW--KLMTLLPQLLEREDFTLLR--H 113 A I P D S + +W L+ + L R Sbjct: 114 AGILILAPTRLAADFLRDRFTARLDRSLSTTPARTWASYAFDLIRRAKAEGIIPLARPPR 173 Query: 114 YLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALV 173 L+ + + GH + GL W A L AL Sbjct: 174 LLSGPEQDL----------------------IIKELLEGHRLPGLE--LPWPADLGGALE 209 Query: 174 EYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPS--RVFICGISALPPVYLQALQALG 231 + L+ R IE+ + + R +AL Y L Sbjct: 210 TRGFRQEVR-----QLFDRIIESGRTPADLAELGKACGRQDWIAAAALYSEYRDVLDLRM 264 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 R + D P +LA R + +D + E + Sbjct: 265 PEAFDPAGIITAARQIFQD--APEFLAAERQRLQLILVDDIQEANPAVYELLADIAAGKD 322 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE--LENRA 349 +P G G L+++L DA V P H + + E L Sbjct: 323 CLVTSSPDTVVQGFRGARP-DLVAELPRLLSPDATVLERPLWHAHRLAPAVAEAWLGVAG 381 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 ++ + H+ S E+ + R+L + D+ Sbjct: 382 RISQRAGGQLSRRLEQTAGDAPGRVEAHLVPSAVHELRYVAQRILDQHI-GQGRSLTDVA 440 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAIS-DRRARQSHPVLEAFISLLSLPDSR--FV 466 V+V + S + + +P + A + + + ++ Sbjct: 441 VIVRNGGQVSE-----LQRYLSGQGIPVRVPVAESAVRDEVAVRPLLDAYAIALDTALLT 495 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 E ++LL + A + LR+ +G G D V L P Sbjct: 496 PEAAVSLLTSRIGGATPLELRRLRQSLRREELTAGGGRGSDSLLVEALLEPGALGSLG-- 553 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 + G A QS G AE V + Sbjct: 554 -----IEGRAARRTARMIQSGRQAARQPGANAESV------------LWALWSATGLSAA 596 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL--AQR 644 W A ++ + L + Sbjct: 597 WTETALAGGPH-------GARADRDLDAMMALFHTAERYVDQMPGAGPEQFLEYLLNQEL 649 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD---LMSQKP 701 ++ + V I T + VV + G+ +GV+P L + Sbjct: 650 PMDTLAARAQVDDAVEIMTPASAAGRQWPVVLIAGLQEGVWPNTRLRGELLGSTLYADAV 709 Query: 702 KRG------------DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 + G R R D+ F A+ A++ L + + PS + Sbjct: 710 EHGTSYALQRDPLSRLRDIRYDELRSFSTAVSRAEELLICTAVASEDD-----QPSSFL- 763 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW--- 806 + + G A+ + + A L Q A E Sbjct: 764 DYAAPLAPGEDARGFTAVERPMTLRALVAELRQHAQLEGAQAQEAARVLAGLAAAEPPVP 823 Query: 807 --LPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 P + + + +P V ++ P+ F Q Sbjct: 824 GAHPDSWWGIQPLTSTDAVVPPGSTVFVSPSKVESVQKSPLDWFVQ-------------A 870 Query: 865 PDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDL--PYGAFGEIFWETQCQ 922 E S + + + E E + R L G + + Sbjct: 871 AGGEAATDFARSLGTLVHAIAQDMPEASGQEYVAELARRWPQLGMKDNWEGRLDHQRAEA 930 Query: 923 EMQQLADRVIACRQPGQ-----SMEIDLACNGV----------QITGWLPQVQPDGLLRW 967 +++LA V+ R G+ + D+A V + G + +++ DG R Sbjct: 931 MVRKLAQYVLVMRGSGRSLLGVEQDFDVALGEVLLDDASPREAVLRGQVDRLEIDGEGRL 990 Query: 968 RPSLLSVAQGMQL------WLEHLVYCAS 990 L + + Y A+ Sbjct: 991 VIVDLKTGKRQPGKTELASHPQLGAYQAA 1019 >UniRef50_C2BJG0 Helicase n=5 Tax=Corynebacterium RepID=C2BJG0_9CORY Length = 1027 Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 104/962 (10%), Positives = 221/962 (22%), Gaps = 164/962 (17%) Query: 115 LTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVE 174 L D + + + + A F + L + E QA Sbjct: 81 LEDYAAQTSMVRSVHSLA--FALLRTTTEEELRLITGAEQDAVIRELLTGQAEDGHGSWP 138 Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 + A + F+ P L G P++ A + L ++ Sbjct: 139 AEMRPALEYVGFARQLRDFLLRSIERGLGPGDLERL----GAEHGRPMWSAAGEFLREYE 194 Query: 235 EIHLL--FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE 292 + LL + +D +L + ++ Sbjct: 195 RVQLLSRAHSYSAAELVTAVLQRPQLLREHPFHTIIVDDAQLLDPTAGKLIREMAPQANL 254 Query: 293 QDVG-NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 VG + + + G L D + +++ Sbjct: 255 VVVGGDADQSVFAFRGAS-SRFLRDFPADHDIELTEPHR--------------------- 292 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 P + I+ R +V+ + + ED + RDI V+ Sbjct: 293 ----------------TPSPACISIVDSDGRLR--DVVANTVRRRHLED-GVPWRDIAVI 333 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 V +P I ++ A + L + + ++ Sbjct: 334 VRSTGDIGQM-----RRTLLAAGVPVHISPTDVVLAEQRLVSAVLLALRALEEDLSNSEL 388 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 LL PV G D +R L + G+ Sbjct: 389 EELLTGPV-------------------------GGADPVTLRRLIRGLRRWDSTTRGIDS 423 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 + E Q + ++ L + L E Sbjct: 424 LRGLLYGELPDFNGQLTEREYSILERVRAVLSAGRDALASGDSVEEVLWAVWSATELDNR 483 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL--AQRLDQE 648 + ++ + + + + A L + + Sbjct: 484 LQASALRGGATGSQADRDLDAMMALFDAAGDYVER---RPDSSLRAFLTHITEQELPTGV 540 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD--- 705 R + + V I T + V + G +G +P D Sbjct: 541 RDRRTAIPQAVEILTAHGAVGREWDTVIVAGAQEGSWPSLGETGSIFGQEDLIDLLDHDI 600 Query: 706 ---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE------ 750 SR ++R LF A +Q+L I + + ++ PS + E Sbjct: 601 DPDTPVSHVASRLAEERRLFHVATTRHRQRLLI-AAVENPEGDTVSEPSRFISEFAGRGV 659 Query: 751 -------------------LIDYIGQSHYLPGDEALNCDESEARV-------------KA 778 L +G P +L + Sbjct: 660 DVPGQAARRQAKRALRRTQLPRELGLDVPEPAPVSLRDGLEVDPLDVAVLSVPAFVAQLR 719 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQ 838 + + + + A + A + + +P ++ ++ Sbjct: 720 RVVTNQESGEVERKQAARQLARLAAADIPGAHPEQWWSARSVAAEMPLHTSGSLSPSRVE 779 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF 898 P++A + E L R + A+ DAE+ Sbjct: 780 ALLNCPLKAVLGNVAEDPSTEE-------------HLLRGTLAHAFFEAIGRGMDAEKAK 826 Query: 899 R---RFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN-----GV 950 + + + + + +++ V Sbjct: 827 LLVMEAFERIQDVPQWQLRFRLDEFSTLLDRAREWARQSEVNQELAGVEIPVGVRVSEEV 886 Query: 951 QITGWLPQVQPDGLLRWRPSLLSVAQGMQ------LWLEHLVYCASGGNGESRLFLRKDG 1004 +I G++ ++ DG + L + ++ + Y + +G DG Sbjct: 887 RIGGYMDRLLRDGEGNYLVVDLKTGRSKPAKKEGEDHVQLMTYQLALAHGAFDGHQVHDG 946 Query: 1005 EW 1006 E Sbjct: 947 EG 948 >UniRef50_UPI00016B20DB DNA-dependent ATPase I and helicase II n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20DB Length = 811 Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 67/597 (11%), Positives = 156/597 (26%), Gaps = 85/597 (14%) Query: 207 LPSRVFICGISALPPVYLQALQALGK-----HIEIHLLFTNPCRYYWGDIKDPAYLAKLL 261 L +SA+ VY + ++ L + ++ L C + P A L Sbjct: 272 LKDSATADKLSAVVDVYEKYIEVLSDRSLFDYDDMILSVIQACEKH------PELRANLQ 325 Query: 262 TRQRRHSFEDRELPLFRDSENAGQLFNSDG----EQDVGNPLLASWGKLGRDYIYLLSDL 317 + + ++ + L + D VG+ A + G D Sbjct: 326 EQFQFIMVDEFQDTNLAQLRLLFNLTSDDDNNPNIMAVGDDDQAIFSFQGADVGN----- 380 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI-----------EEFSRSDNKRP 366 + F D + + + EN + + + Sbjct: 381 -----IQRFRQHYHDPKIIVLTDNYRSAENILTSARQVITQGSDRLENTIDGLSKQLTAH 435 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 D S + S E + ++ +++ P +I ++ + Sbjct: 436 ADSQGSRVEVQEFSSTSEERAGVAKQIAQLIQSGE--KPENITLIARHHKELIEILP--- 490 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 + V++ L + + ++ LA +P + A Sbjct: 491 --YLYRENIAVNYERHDDILEQNVIQILDKLARVIVAIHQNDLSLANSLLPEIIAHPAFG 548 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + ++ R +L L + ++ LL A + + Sbjct: 549 FSTSDIWKLSLHAYKNR---------QLWLESMLANSTFKEFGEWLLDRAKDVPNLPLEE 599 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 L + +E + P E+ L Sbjct: 600 HLDNLLGLTIDSENNNPSIISIASFYF---------PPEKLEKNPDTYLTT--------- 641 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA------QRLDQERISQRFLAGPVN 660 + + + + L + + RL Q R + G +N Sbjct: 642 ------LESLRTLRQKLRDRITDKNPTLEDFLEFIDLHISTKTRLTQIRPHASSIRGAIN 695 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM--SQKPKRGDRSRRDDDRYLFLE 718 + T + + F V ++G D + ++ + + + + D+ LF Sbjct: 696 LMTAHKSKGLEFPHVFVVGAIDSAWGEKVRTRSRLIRYPANLQLQPAGATYDERLRLFFV 755 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 A+ A+ L ++Y + + S + I + ++ S + Sbjct: 756 AMTRAKSTLTMTYSQTNDSGSDTIIAS-FLTNCTPTIIPAIENSTEQIEIAKTSWSE 811 >UniRef50_Q67RU7 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67RU7_SYMTH Length = 672 Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 80/617 (12%), Positives = 145/617 (23%), Gaps = 115/617 (18%) Query: 145 WLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCP 204 L + G + L E Q +Q L + L+ + L + L + P Sbjct: 148 MLRHAQGGGPLRILLEDQQFQ--LIRNLMRTMGLNTDDEAVQEVLAD--LSRLRAEPEPP 203 Query: 205 PGLPSRVFICGISALPPVYLQAL---QALGKHIEIHLLFTNPCRYYWGDIK-DPAYLAKL 260 G R +LPP L A K + L F + ++ P L Sbjct: 204 AGFRPR-------SLPPAEFDGLLRRYAEAKAEQGLLDFDDLLHEALALLRGRPELLEGY 256 Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLES 319 R ++ + L VG+ A +G G +LLS Sbjct: 257 RRRFGHILVDEFQDTNPVQFALVRLLAEPGRNLCVVGDDDQAIYGWRGATPEFLLS---- 312 Query: 320 SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN---IEEFSRSDNKRPLDPLDSSITF 376 F D+ P + + A RP+ + Sbjct: 313 ------FGDLYPGAAQVTLAVNHRCPAPVVEAANRLVAHNVRRLGKVMRPVRRSGPPVRL 366 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 E EV+ + V+ V + +P Sbjct: 367 LTPADTVEEAEVIARLVREA-----GAPLSHWAVIYRTNQQ-----AHVLAEVLSREGIP 416 Query: 437 YAISDRRA-RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 Y ++ ++ L Sbjct: 417 YRTLGGLPNLYRRWPVQDVLAYL------------------------------------- 439 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 D + L + + A + ++ Sbjct: 440 --------RAAAGDRMALLPVLNRPNRYLARAVAEEAARIAGATDGDLLAAIGRTGLLRT 491 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 V L L L E + R ++ A ++ Sbjct: 492 WQLRPVEELEDHLRALGRM--------TAPEAIAYVRSVIGYDDYLQEYAARAGGRPDEL 543 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 + A + L + + + V + T + + F V Sbjct: 544 LGLLAEVQRTA---PRLLLPAYLGHV-AAFSAQADRKAPEGQAVTLVTCHRAKGLEFPRV 599 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 + G D + P + P +++R L A+ A+++L+IS Sbjct: 600 VVAGAVDRLLPHRSNPD----------------IEEERRLMYVAVTRAREELWISAP--R 641 Query: 736 IQDNSERFPSVLVQELI 752 + E PS V EL+ Sbjct: 642 SYEGRECRPSPFVAELL 658 >UniRef50_B2T5W9 UvrD/REP helicase n=37 Tax=Proteobacteria RepID=B2T5W9_BURPP Length = 720 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 55/504 (10%), Positives = 116/504 (23%), Gaps = 90/504 (17%) Query: 247 YW-GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASWG 304 YW +P A L R ++ + + L + G VG+ + + Sbjct: 237 YWSHMAAEPGIAADLSGRFDHVLVDEYQDTNRLQASILLALKPDGRGLTVVGDDAQSIYS 296 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF---SRS 361 G +L P ++ + A + E + Sbjct: 297 FRGATVRNILDFPAHF---------DPPAKQVTLERNYRSSAPILAASNAVIELASERYT 347 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 N + + +++L + + + V+ + Sbjct: 348 KNLWTDKASAQRPRLVTVADEADQARYIVEQVLE--AREQGMKLKSQAVLFR-----AAH 400 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 A R +P+ ++ +++L ++ ++ Sbjct: 401 HSAALEIELTRRNIPFVKFGGLKFLDSVHVKDVLAVLRWAENPRDRVAGFRVVQ------ 454 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 LP G T L ++ + Sbjct: 455 ---------------------------------LLPGVGPATAARVLDEVVACAGSGNPA 481 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 L + E L+ + ++ P + R Sbjct: 482 DTAGGALAAFTAPARAQEDWHPFVKLMSSIY------GRQTPWPAEFEMVRRWYEPHLER 535 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA----QRLDQERISQRFLAG 657 + E A Q ++I EL E Sbjct: 536 NHEDAAIRHADVSQMESIAGTYASR--------ERFLTELTLDPPDATSDESGVPLIDED 587 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 + + T+ + ++ V +L DG P G D++R L Sbjct: 588 YLILSTIHSAKGQEWRNVFVLNGVDGCIPS------------DLGTGSEEEIDEERRLLY 635 Query: 718 EALISAQQKLYISYIGRSIQDNSE 741 A+ A++ L+I R N Sbjct: 636 VAMTRAKEDLHIVVPQRFYVHNQT 659 >UniRef50_Q0BZ49 UvrD/REP helicase domain protein n=2 Tax=Rhodobacterales RepID=Q0BZ49_HYPNA Length = 1137 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 99/778 (12%), Positives = 193/778 (24%), Gaps = 142/778 (18%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASWGKLGRDYI 311 D A ++ R ++ + L + VG+ + + G Sbjct: 410 DEAVRVEIQRRYEHVLVDEYQDVNRASVRLLRALKPDGSNLWVVGDAKQSIYRFRGASSY 469 Query: 312 YLLSDLESSQELDAFV-DVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 +D F + P + ++ + + + + Sbjct: 470 N----------IDRFETEDFPGGTSLQLSTNYRSSQEICNTFSTFATTRMAASGFQANAF 519 Query: 371 DSS----ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 +F S E++ + R+ A D T RD V+ + Sbjct: 520 KGKSGVAPSFVSVESKDHEIDEIAARISAAC--DDGTTFRDQAVICKGNARLAEIAA--- 574 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 R +P P ++ +SLLSL P F + Sbjct: 575 --GLEARGIPVLFLG--PLFDRPEIKEALSLLSLVIDPRAMALTCIASMKP-----FRMF 625 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 E + + V + +D V E + ++ G ++ Sbjct: 626 IEDVAVAIEAVRTTKKPLPLDWRTVLETASGMSEGGRASA-----------KALVGAFEE 674 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 + P + + ++ L + R L W FL E Sbjct: 675 IEPTATAWQVFTKIYLDRTRLAADIATQAREGNANPALALWQ-------FQNFLRSVLPE 727 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + I I + + D L + V + T+ Sbjct: 728 KSGYPIRDLLDHIRRLVILSDERDLRDLPATAQTI---------------NAVRLMTIHG 772 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG---------DRSRRDDDRYLFL 717 + + FK++ L + PR G D ++ R LF Sbjct: 773 SKGLEFKMLHLPSLTSDSIPRSAKQSRGLHPPDGMIEGPMFRGSDAIDAGHDEEQRCLFF 832 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 AL A+ L++ Y + + S V ++ + + + + ++ Sbjct: 833 VALSRAKDGLFL-YAPNKKSNGHRQSRSSFVDDISGQLADQKPISAVRDVVGEAERFTLE 891 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETL 837 + L Sbjct: 892 VDGVA------------------------------------------------RMSPSQL 903 Query: 838 QRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL---VEQDDA 894 F P R FF LQV R +S + + Q +++ L + Sbjct: 904 ATFDKCPRRFFFAHVLQVGGRRLESA----------PMRMHNAVQAVIDELTARPDDTPD 953 Query: 895 ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD-----RVIACRQPGQSMEIDLACNG 949 E + A + +G + Q +L R CR+P Q++ + Sbjct: 954 ETEMQSIIDAAWVAHGPIEHGYASEYRQICDELLKFFILLRQGECRRPPQTLSLRFEDAE 1013 Query: 950 VQITG--WLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGE 1005 V +T + R R + + A G GE+ G+ Sbjct: 1014 VVVTAHEQIETSHSTVFRRIRTGR-KTSTALDALDAAAFQIAVDGRGEAEFVYLTGGD 1070 >UniRef50_Q2SYL0 Superfamily I DNA and RNA helicases n=2 Tax=Burkholderia thailandensis E264 RepID=Q2SYL0_BURTA Length = 920 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 80/856 (9%), Positives = 193/856 (22%), Gaps = 166/856 (19%) Query: 176 THQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIE 235 R+ Y + L C L + +L+ + L Sbjct: 142 LDGKPLKRYTDTRNYVSALAILREDHPCDEALLEDNTV-------ASHLKIYEDLTDKKG 194 Query: 236 IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQD 294 R ++ +L R + ++ + +L Sbjct: 195 YLDYSGILNRAVAELTRNRELRERLALRVKHVIVDEYQDVNPVQEAIVAELRQLGADICV 254 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE------LENR 348 VG+ + G + +L F D ++ + L Sbjct: 255 VGDDDQTIYQWRGSEVQNIL----------TFDRRYNDVTQVRLEENFRSSEGVVALARE 304 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML-------EEDP 401 ++ +N D I SP+ E E + +A+ + Sbjct: 305 FISHLNHRLPKEMKATHAQSYEDGDIVALGFDSPEEEAEYIAKTCMALRGVVVHESSSER 364 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 ++ D+ V++ + +P + A A +PY I+ +EA L Sbjct: 365 GISWSDMAVLLRSVRRDAPAVTA----ALDAVRVPYVITGMDNLFQKEEVEAARQLFYFL 420 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 ++ A L + + + ++++ E+ Sbjct: 421 AGEIEMNELRAAWQ-----------RADLGITKHALEGAIAAAAEARVDMQDAEIGQFKV 469 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 + + + + G + +L ++ + Sbjct: 470 YNLQRQFIAFMEKSELREE----------RVPGGRGEIVFYNLGKFSQAISDFESIHFHS 519 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 P+E++ + E + + Q + +L Sbjct: 520 DPVEKYKSFAGFLRFHAENAYPEGWQDNGFVS---PDAVRIMTVHQAKGLQWPVVFIPQL 576 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 + P + + L ++ G Sbjct: 577 -------------------VKNRFPAKGGGGRNAWHLLPSEAFSNAARYRGG-------- 609 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 DD+R LF A+ AQ+ L++++ + + S E++ Sbjct: 610 -------ADDERRLFYVAVTRAQKYLHMTWAPHEGNR-TAQVASDFYNEVL--------- 652 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFV 821 ++ Sbjct: 653 ----------------------------------------ASKYVKRRVQNYATRQQLTP 672 Query: 822 QPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQIN 881 P T+ ++ F+ P + ++ N E + + L+ Sbjct: 673 APKASVANVTLSFSDVKYFFECPYQFKLRILYGFNAP--LDEALGYGKSLHDALAE---V 727 Query: 882 QQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC-QEMQQLADRVIACRQPGQS 940 + + + L + ++ +A + + Sbjct: 728 HA---RALRGETIDSREAEELIERHLRAPYAYPDLKDKLKSAAVKVVAAYIRKNAAEFNN 784 Query: 941 MEIDLA------CNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL--------WLEHLV 986 +E +GV + G + V+ L Q + L Sbjct: 785 LEFSEKAIEIALGDGVSVAGRIDLVRRMDTDEVTIVDLKSNDRAQAEAVTETQLHIYALG 844 Query: 987 YCASGGNGESRLFLRK 1002 Y G + + + Sbjct: 845 YKELTGRPADYVEIYE 860 >UniRef50_C1PCZ8 UvrD/REP helicase n=1 Tax=Bacillus coagulans 36D1 RepID=C1PCZ8_BACCO Length = 723 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 71/571 (12%), Positives = 161/571 (28%), Gaps = 96/571 (16%) Query: 184 WHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNP 243 + Q +I +++ P V +A +A + G + Sbjct: 147 EDQLEELQTYISYIKNKMIPPAKWGKVVTSVPEAARILKEYEAFKKQGTGQLLLDFDDML 206 Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLAS 302 +DP L R ++ + +L V + + Sbjct: 207 THANEIFRRDPNLLCMYQGRYDYVLTDESQDTSMVQHAIVEKLVRRHRNLCVVADDDQSI 266 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFS 359 + G + YLL+ F V PD + ++ + + + Sbjct: 267 YSWRGAEPSYLLN----------FKKVYPDAKILFMEQNYRSSQEVVTTANLFIKRNKHR 316 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 N +P I F + + + L ++ + E+ +I V+ + S Sbjct: 317 YDKNMFTENPPAGPIRFVRLPDYKYQAKYLAQNIV--VSEN----FSEIAVLYRNNMSSI 370 Query: 420 PFIQAVFGSAPADRYLPYAISDRR-ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 I + +P+ + D SH V++ ++++ L + ++ + + + Sbjct: 371 ALI-----NEFDREGIPFYLKDTDNRFFSHWVVQDILNVMRLTFTDKRADILAQV-HSKL 424 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 E ++ +R + + +++ + T R Sbjct: 425 DGYITKQQMEAVKGIRNNQSVFDNLVRYANLKDYQVQKVRKVKETLRE------------ 472 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 L +++ R L E+ LE Sbjct: 473 -----------------------MRGMPPLDAIHVIRGRLGYEKALENMCKKF------- 502 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 + + + + I + + + LA L + ++ Sbjct: 503 ----GFRKEYLIGVLNTLEDIADTLVTMEE-----FAARLKHLAHILKTAKGNKG--RHA 551 Query: 659 VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 V + T + + F+ V ++ + DG+ P LM ++ LF Sbjct: 552 VTLSTFHSSKGLEFEKVYMIDLVDGIIPGDDEKENDLLM------------EESVRLFYV 599 Query: 719 ALISAQQKL-YISYIGRSIQDNSERFPSVLV 748 A+ A++ L +SY R+ S S V Sbjct: 600 AMTRAKKSLEMVSYEKRN---GSRTMDSPFV 627 >UniRef50_B1XR08 ATP-dependent nuclease subunit A n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XR08_SYNP2 Length = 1075 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 78/829 (9%), Positives = 192/829 (23%), Gaps = 163/829 (19%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG----EQDVGNPLLASWGKL 306 ++DPA R R + ++ + + L VG+ + +G Sbjct: 341 LEDPAVRDYYKERWRAYLIDEFQDTNPTQGKLLEALTGRSEEQSKLTIVGDDKQSIYGFR 400 Query: 307 GRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRP 366 D + A + +S + + + +++ Sbjct: 401 RADVEVFRAWRSQLNNGVALTQSFRTH-----ESLVKNINTVFRPVLGELHQDLDAHRQE 455 Query: 367 LDPLDSSITFHVCHSPQR---------EVEVLHDRLLAMLEED-----------PTLTPR 406 + + ++ E + + + ML ++ + P+ Sbjct: 456 APHDPLHLEIYRFAPKEKMAIAEARKVEAQQIAQLIYEMLSQEMLVWDKATRKLRAIAPK 515 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 DI ++ D ++ A A +P+ S P +SLL + Sbjct: 516 DIAILSRTWDPLD-----IYSQALAQWQIPFLQSSGGNLLDTPEALDGLSLLQFIANPND 570 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 L L A + + Sbjct: 571 D----------------------------------------------LALVAVLRSPFLT 584 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 R+L + +W S L + + + L P + Sbjct: 585 LSDRLLYELRPQKKDKKWWSCLKDSQQPEVQQR--------VTILKQLLNKRDIFTPSQL 636 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 + + + + + + ++ + + Sbjct: 637 LQLADQLTGYSAVITNLPQAERRLADWRGFLELLRHLEQGTGDVLSVVRR-LQRFQRHGV 695 Query: 647 QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND---------------GVYPRQLAP 691 + V++ T+ + + + VV + + GV +Q Sbjct: 696 KIPRPPLEAENAVSLMTIHAAKGLEWSVVIVPDLTRKLSNTSSSILFDPEFGVALKQRDD 755 Query: 692 LGFD----LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 G L + + + AL A+ +L ++ Sbjct: 756 QGKLQKSVLFQLLEGHQKERETAEAKRVLYVALTRARDRLILTTPKEKGGG--------- 806 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 +D + + ++ D Sbjct: 807 ----LDLLQPGLEDFAIKDISPDL---------------------------YPPAEPWCE 835 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 S + + + + +P+ L + P + +F+ ++ TE Sbjct: 836 GDESSKPQQPPQLLLEPARSYGLELPMTALTTYARCPKKFYFEQIIRHPGLTEGESNY-- 893 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 G + + L + LP E Q + Sbjct: 894 ------GAAIGSLTHTALEKDYQTV---EQLNFHNQDLKLPPDKVQEALDLAQTFRTDPV 944 Query: 928 ADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVY 987 A + + + ++L N + + G V + +L + + Sbjct: 945 ---FAAVQAGEKEIALELRQNQLVLNGRADLVGTNFVLDVKT-DSKPNPIEHRFQLWAYA 1000 Query: 988 CASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLL 1036 A+ +LR+ + F P + L++ + P Sbjct: 1001 RAAEKPTAYIAYLRQRQLYTFSPTDLKSIDQEADILMQQIAQRDYTPKP 1049 >UniRef50_Q73RK3 ATP-dependent DNA helicase, UvrD/Rep family n=2 Tax=Bacteria RepID=Q73RK3_TREDE Length = 1139 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 80/934 (8%), Positives = 208/934 (22%), Gaps = 202/934 (21%) Query: 144 DWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTC 203 D +++ G + + E + +++ L+ + + F + L Sbjct: 253 DKISKTAKGRGNDAVKEIKEKLKIIYEKLICIYNFDYSR-----DFLASFFDMLNELQKE 307 Query: 204 PPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTR 263 + + S + + + L I D Sbjct: 308 YIYEKKQRGLLTFSDVSQLAVDVL-----------------------INDIDLRNFYKKN 344 Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSDG----------------EQDVGNPLLASWGKLG 307 ++ + + + VG+ + + G Sbjct: 345 ADIIMIDEFQDNNSLQRDLLFLIAEKFERSEKFVPGPHELCPNKLFFVGDEKQSIYAFRG 404 Query: 308 RD---YIYLLSDLESSQELDAFV---DVTPDNLLHNIQSDILELENRAVAGVNIEEFSR- 360 D + L D+ + L A + + L N+ + I + +E+ Sbjct: 405 ADVSVFRKLADDISDKERLAATRLLINYRTEPTLINLFNTIFSKVFYSEVNKPLEKNGFV 464 Query: 361 ---------SDNKRPLDPLDSSITFHVCHSPQ---------------REVEVLHDRLLAM 396 ++ + P+ ++ I + E L R+L + Sbjct: 465 PAYEAEYVPTETRAPVKGIEPKIEIMFFDKKRFNALEDSSRFLSPVEAEAFYLAKRILEL 524 Query: 397 LEED---------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 + + D V++ S + + +PY +R + Sbjct: 525 RNQGFKIRDGKSARACSWSDFAVLLRASTKQSTY-----ERVFRNFGIPYRSVQQRGLFN 579 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID 507 + ++L + + +L P + Sbjct: 580 DAPINDIYAMLKIIAYPSDKKTYAQVLHSPFV---------------------------- 611 Query: 508 DDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567 + +LL + + + + + L Sbjct: 612 --------------NIDDDAFAVLLLNFTKAFDISLAEKL------NEKNKDAYLRACDL 651 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 +LN ++ + + +FL E + + + Sbjct: 652 FARLNKNILTMSCAESVTYLW---YEEAYRYFLLSNEENHHYMDLYDYLFELACQADING 708 Query: 628 YGDAVPLSLLRDELA--QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 + + LL + +RLD + V T+ + + F +V + + Sbjct: 709 LTFSQFVDLLSSHIEDNERLDDMELPLDDQKDSVQFLTVHKSKGLEFPIVIVPDCGNRGI 768 Query: 686 PRQ-----------------------LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 P + A G + + + + L A Sbjct: 769 PEKKEGLVFYNEDMGPVLYSPKAPGLPAKAGNLIFESLRDEANAKLVAETKRLLYVAATR 828 Query: 723 AQQKLYISYIGRSIQDNSERFP--------------SVLVQELIDYIGQSHYLPGDEALN 768 A+ L IS + +Q+ + S ++E+ + D+ ++ Sbjct: 829 AESYLIISGVYNHLQNEDSKDSKKDVTKDNDCSSSDSRSLEEIKSMLK-----LSDKTIS 883 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 E P + ++ + A S+ + Sbjct: 884 FFELLLPALPDKHEDIIFTEILPTERKKLFNNLKTQKHEKVNFEKLFASSKVKEFNLAEK 943 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 T + + DS + L+ A Sbjct: 944 RITTATSLAHEVNKKSREGYLYSLTSEKDKLPDSFEDKDGQKEFTAAELGTLTHSLIEAR 1003 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR-----VIACRQPGQSMEI 943 + + + E+ + + Q Sbjct: 1004 LLNKEF------------IYPKGHSEVERKKIYAWADNFFNSDMYVLAKEAEQLKSEYGF 1051 Query: 944 DLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQG 977 G ++G + + + + + Sbjct: 1052 LTDYEGQIVSGQIDLLFKKSGIVY-VVDYKTDEI 1084 >UniRef50_C1ZID4 DNA/RNA helicase, superfamily I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZID4_PLALI Length = 700 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 61/489 (12%), Positives = 118/489 (24%), Gaps = 94/489 (19%) Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLE 318 L R + ++ + E L + G VG+ + + +L Sbjct: 241 LRQRYKAVLVDEYQDTNALQGEIVRALRPDGQGLTVVGDDAQSIYSFRAATIENILR--- 297 Query: 319 SSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN---IEEFSRSDNKRPLDPLDSSIT 375 F P + + + A + R P Sbjct: 298 -------FDQEYPGTNVLTLSQNYRSSPEILAASNLVMSLATEGRKKQLWTNRPPQGKPL 350 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 C + ++ +R+L + + ++ + V+ + A + R + Sbjct: 351 LVNCRDDNEQSTLVAERILEL--REMGVSLKGQAVLFR-----ASHHSATLEIELSRRNI 403 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 P+ ++ +++L L ++ L + Sbjct: 404 PFIKFGGLKFVEAAHVKDAMAMLRLAENPRDIVSALRV---------------------- 441 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 L LP G T R R+ G + Sbjct: 442 -----------------LLLLPGIGPKTARQLTERLGSGSSAFEPWR----------EHT 474 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 A H + L +G PL L R L + A +Q Sbjct: 475 PAAATKIHWPVFVALLRTLVKGGQTTTPLPLQLAQVRQFLAPLLEQKYDHAPARLRDLEQ 534 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELA----QRLDQERISQRFLAGPVNICTLMPMRSIP 671 + I A EL + + T+ + + Sbjct: 535 LEIIAARYESRS--------QFLAELTLDPPTSTQDFAQDPLLDEDWITLSTIHSAKGLE 586 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 + V +L DG P +A +++R LF AL A+ L + + Sbjct: 587 WDAVYVLHAADGNIPADMATRN------------PREIEEERRLFYVALTRAKTHLQVYH 634 Query: 732 IGRSIQDNS 740 R Sbjct: 635 PQRYYFHGK 643 >UniRef50_A8VW69 Phospholipase D/Transphosphatidylase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VW69_9BACI Length = 1244 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 97/1066 (9%), Positives = 239/1066 (22%), Gaps = 200/1066 (18%) Query: 43 AQWLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQL 102 +WLQ S + F LP F + + + + + +S L + Sbjct: 197 FEWLQYAASLYDKAGSGDVFELP------WFDELTGIVKENLSQSVSFLS----EALQLI 246 Query: 103 LEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYL-VYRPDWLAQWETGHLVEGLGEA 161 E F R + + D+ K + D+ V P + + E Sbjct: 247 DSHEGFEPYRDAVAFELDQAKNILETDHPGTAIDRLSSVTFPRLKPLSKKVEFDPEIQEK 306 Query: 162 QAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPP 221 + N + L + L + Sbjct: 307 IKQLRD-----KAKKTVDDSRSAYALNSLDDALNDLGALAEPVRELAKTIQRFEKKYAIK 361 Query: 222 VYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSE 281 + + L +K + + ++ + Sbjct: 362 KREKGVVDFSDLEHFALKILTSS------LKGEPIANQYSNYFQEVMTDEYQDTNRVQEA 415 Query: 282 NAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPD-NLLHNIQS 340 Q+ NS VG+ + + + L + + D ++ + Sbjct: 416 ILSQVSNSSNRFMVGDIKQSIYRFRLAEPGIFLDKYRRYTSDGSGEGMVIDLSMNFRSRD 475 Query: 341 DILELEN--------------------------------------RAVAGVNIEEFSRSD 362 +IL N + V E Sbjct: 476 EILSAVNYVFRQTMDERVGEIRYDDAASLVTGNHRFPEVFSPLVHVQLVNVAENESETEP 535 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE----------DPTLTPRDIIVMV 412 ++ P D Q E + + +M E + ++ RDI+++V Sbjct: 536 HQTPDSDSDEKEQDLSAA--QAEARSMIASIKSMTESSSVFDPSTGHERPVSYRDIVILV 593 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 + F +P + ++ I+LL + D+ + + Sbjct: 594 RSMTW-----ADTFMEEFKAAGIPMYADLSNGYFTAIEVQIMIALLKIIDNPKQDVPLAS 648 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 +L P++ M Sbjct: 649 VLRSPIVGL---------------------------------------------SADEMA 663 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAE-LVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 + + ++ Y + + E L + S L +L+ WR + Sbjct: 664 EIRIDLPSSDFFSAIHHYADQDQVENESLQIKVKSFLTKLDEWRSSARSTALSSLIWKLY 723 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ--ER 649 RD + + + ++ +R D E Sbjct: 724 RDTGYYDYAGGMPGGKQRQANLKALYDRAKAYEKTSFRGLYRFLSFIAKMQERGDDLGEA 783 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN----------------------DGVYPR 687 + V + T+ + + F +V + G+N P Sbjct: 784 RAIGEQEDVVRLMTIHKSKGLEFPIVFIPGINREFNQMDLRKSYLMHQKHGFGTQWFDPE 843 Query: 688 QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS-----------I 736 + R ++ + A+ A+++L++ G++ Sbjct: 844 LRVLYPSVQHELMKEISRREMLAEEMRVLYVAMTRAKEQLHLIGSGKNLPDQLEKWVNAG 903 Query: 737 QDNSERFP------S-VLVQELIDYIGQSHYLPG--DEALNCDESEARVKAHLTCLHTRM 787 D P S +I IG+ + + + + + + Sbjct: 904 DDEGPLIPVPQRLRSKRYADWIIPAIGRHPDIQQCLRDQTADIPIPSTILDDRSKWSMTL 963 Query: 788 PFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQ---PLPFTLPETVPLETLQRFWAHP 844 Q + + G + + + ++ A Sbjct: 964 TQSTDLPQYVGDLQPEQHTIIDQLAKGAPVKSDPALDLEVKERFEWSYAHKEATQYLAKQ 1023 Query: 845 VRAFFQMRL----------QVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN----ALVE 890 + + L + + L+ + + ++ Sbjct: 1024 TVSELKQTLDSDYGSDDFVRHFTPDFAERPAFMQQKKLKPAEKGTLVHLVMQLVNLKQTS 1083 Query: 891 QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ-QLADRVIACRQPGQSMEIDLA--- 946 + + +++ L + ++ E + Q + + + + + Sbjct: 1084 NKEIQAQLKQWVNEDRLTHEEADQLPVEQIARFFQTETGAEMKEAKLVWRELPFSFEAPV 1143 Query: 947 -----------CNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW 981 V I G + + + + Sbjct: 1144 KMAYPDWEGPSDEHVFIQGMVDALYQSNDGELVLVDYKTDRIPEHL 1189 >UniRef50_B6G1B8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1B8_9CLOT Length = 1256 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 86/1087 (7%), Positives = 248/1087 (22%), Gaps = 249/1087 (22%) Query: 62 FPLPASFIWDMFVRVLPEIPKESAFNKQSMSW---KLMTLLPQLLE-----REDFTLLRH 113 FP P ++ + L + F+ S W + ++ ++ + + + Sbjct: 195 FPNPEKWLNESADAFL----VDDDFDFTSSKWGRIVINSVKTEIEDIVGNMEKALATVHP 250 Query: 114 YLTDDSDKRKLFQLSSKAA-----------DLFDQYLVYRPDWLAQWETGHLVEGLGEAQ 162 YL + + +K+ S + D + P+ + + + + Sbjct: 251 YLGEIENIQKIITESERIDVVYNSLDKGWDDFIKAIGEFYPEDYRKGKKIKKDDPDEMRE 310 Query: 163 AW-QAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFIC------- 214 AW A ++ ++ + + ++ + + V Sbjct: 311 AWKIATEYRK-EAIESMKKVAEMYKNRYSKDIKKEIDMSYPIVRAISDAVLEFWKKFEEA 369 Query: 215 ----GISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFE 270 GI + AL+ L G + + + Sbjct: 370 KRDKGIIDFNDIEHFALEIL------------VDEDENGRQIPSETAKRYSEEFKEIFVD 417 Query: 271 DRELPLFRDSENAGQLFNSD--GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVD 328 + + + N + VG+ + + L E + Sbjct: 418 EYQDSNLVQEAILSSIANKEMPNRFMVGDVKQSIYRFRQAKPEIFLHKY----ETYSTEK 473 Query: 329 VTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS--------------- 373 D + + +N A I E S ++ D Sbjct: 474 D-KDGRKIMLYKNFRSRKNVLDAVNFIFENIMSKELGEIEYNDDEKLNPGAVFEECYEEN 532 Query: 374 --------ITFHV-----------------CHSPQREVEVLHDRLLAMLEED-------- 400 + + Q E + + ++ ++ Sbjct: 533 AIVGGSCDVHIIEKKANENLTDEQLEEEEDLDNIQIEARAIGKIIKEIVGKNSDGKIQMV 592 Query: 401 --------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 +DI++++ +++ + + +P ++ Sbjct: 593 YDKEEKRYRQAKYKDIVILLRATSNWASVLT----EEFTNMDIPVYADTGTGYFDTIEIK 648 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 +SLL + D+ +LA+L P+ Sbjct: 649 TIVSLLKVIDNPMQDIPLLAVLKSPIYNFTP----------------------------- 679 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 ++ + ++++ Y + + L +L+ Sbjct: 680 ----------------EELIDIRIVNRNVSFYEAMKIYASFDDCDNK---KVRDFLERLD 720 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 ++ + E + + + + + + Sbjct: 721 DYQERSSYLSTDELLWYLYNETGYYAYAAILPAGKQRQANLRILFERAKQFEDTSFKGIF 780 Query: 633 PLSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND-------- 682 ++L + E + A V I ++ + + F +V GM Sbjct: 781 NFINFVEKLKKSDSDMGEAKTLSENADVVRIMSIHKSKGLEFPIVICGGMGKRFNKMDMN 840 Query: 683 ---------GVYPRQLAPLGFDLMSQKPKRGDR-----SRRDDDRYLFLEALISAQQKLY 728 G P+ + K + ++ + A A++KL Sbjct: 841 RGILYHHELGYGPQVVNLETRLSYPSMMKEAMKKQMVVEMLSEEMRVLYVAFTRAKEKLI 900 Query: 729 ISYIGRSIQDNSERFPS--------------------VLVQELIDYIGQSHYLPGDEALN 768 I+ ++ N +++ S + ++ G L+ Sbjct: 901 ITGAVNDVEKNLQKWASNSQKVTKNNKLDRYNLLKSASFLDWIMSVAIAHKDARGILPLD 960 Query: 769 ---CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG--KAHSEFVQP 823 ++++ ++ + RE L ++ + + + Sbjct: 961 SEIVEKNDESEWKFKIHQREDYTLSSEDEEEINLADVLREELTSSREVDYSEIVRNRLDF 1020 Query: 824 LPFTLPE-----TVPLETLQRFWAHPVRAFFQ---------MRLQVNFRTEDSEIPDTEP 869 ++ + ++R W + + I + + Sbjct: 1021 KYPYQKSVEKSGSISVTEIKRLWNLEREDNLEIDINEIESSRNNKKTEIKRPKFIQENKD 1080 Query: 870 FILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ---- 925 L R + ++ ++ D + + + Sbjct: 1081 EKLSPTHRGSVVHLVMQ-IINMDRVSTIDEIKNQIEEFVQKEIITQKEADVVNPFKIYKF 1139 Query: 926 ---QLADRVIACRQPGQSMEIDLAC--------------NGVQITGWLPQVQPDGLLRWR 968 +L R+ G+ + + G + + Sbjct: 1140 FKSELGTRMKNADFVGREKAFYTEINMKNLFAKEGIDYDESIMLRGIIDAYFEE-NGEIV 1198 Query: 969 PSLLSVA 975 Sbjct: 1199 LLDYKTD 1205 >UniRef50_A4W0M6 ATP-dependent helicase/deoxyribonuclease subunit B n=6 Tax=Streptococcus suis RepID=ADDB_STRS2 Length = 1088 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 113/1010 (11%), Positives = 267/1010 (26%), Gaps = 178/1010 (17%) Query: 44 QWLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFN-----KQSMSWKLM-- 96 Q+L + + + P S ++M +VL +P+++ F+ ++ LM Sbjct: 14 QYLTEQTATFAEQGKRVFYIAPNSLSFEMERKVLEYLPEQATFDIIVTRFGQLARYLMID 73 Query: 97 --TLLPQLLEREDFTLLRHYLTDDSD-KRKL-------FQLSSKAADLFDQYLVYRPDW- 145 L + + L+ D K+ F ++ L+ + + R + Sbjct: 74 RKEAGQPLDDVGLAMIFFRVLSQFEDGDLKVYGRLQTDFGFINQLVALYKE--LQRANMS 131 Query: 146 LAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL-GQPRWHRANLYQRFIETLESATTCP 204 + E + QA L K + T L + H++ L Q + L Sbjct: 132 ILDLEAMDSPDK-------QADLVKIFLAVTDILSKEGFEHQSKLAQ--LTGLVETGQLD 182 Query: 205 PGLPSRV-FICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTR 263 L + V + G S + AL + + L+ + Sbjct: 183 EQLKNIVLVVDGFSRFSAEEEALVSALNERVSEILIGVYASKK----------------- 225 Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQEL 323 GN A+ D++ LS ++ Sbjct: 226 ------------------------AVQATYAEGNVYQANV-----DFLRQLSAQFQTKAT 256 Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQ 383 + +L+ + + I + + Sbjct: 257 YIGQEP------------VLDSIGKFSKNMEAYYDYSGTMIDLTPADQEKIQLWEVVNQK 304 Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 EVE + + + + +DI++++ D+DSY I +F +PY Sbjct: 305 EEVEQVATAIRQHVHQ--GARYKDILLLLGDVDSYKLQIGKIF----DKYDIPYYFGKAE 358 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 HP++ SL L RF +ED+L LL + A+ +++ L ++ + ++ Sbjct: 359 EMSHHPLVHFVESLERLRRYRFRAEDLLNLLKSGLYASI---SQKELDLFESYILFADMK 415 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 R + + + L+ + + P ++ + Sbjct: 416 G--QAAFSRAFSVNGRADYDAEVIKEKRLVYDLTVLEPLRAKIMEPLNQLFKAGPQSGTA 473 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 LL + + + + +E+ ++ + + ++ Sbjct: 474 ---LLEKFMAFLEAIDLPKNMEKMSRNLSEVEQEKEEQV----------WKSFTHLLENF 520 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMND 682 + + + L + VN+ + + K V +GM Sbjct: 521 HQIFGKEKLKMDDFLAILQAGMQASHYRTVPATVDVVNVKSYDLIEPHTAKYVYAIGMGQ 580 Query: 683 GVYPRQLAPLGFDLMSQKPKRGD------------RSRRDDDRYLFLEALISAQQKLYIS 730 +P+ + K R + + L SA ++L IS Sbjct: 581 SNFPKVAKNTSLLTEEEMEKVNLVSASSSRFDLVSRENIKKNHAAMMSLLNSATEQLVIS 640 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA---RVKAHLTCLHTRM 787 + S ++ L +S + L+ + + + + Sbjct: 641 TPQIYNEGEDSL--SPYIKILQKMGLKSEERGRIKTLSPQDIGHYKSLLSRLIESERPSL 698 Query: 788 PFDPQNYQPGERQSYAREWLPAASQAGKAHSEF--------------VQPLPFTLPETVP 833 + Q R P P + Sbjct: 699 ETEEWEGQRAFWTVLVRHLKKKLESQSIEIPTITGDIASKQLSDETLAALYPEDKPLNLS 758 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALV---E 890 +L F+ + F + L++ E ++ +V Sbjct: 759 ASSLTNFYNNQYLYFVRNVLRLRE---------QESIHPTAFQHGLFLHRIFERVVMDQS 809 Query: 891 QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ-------------- 936 + D ++ + + + +++ D++ Sbjct: 810 ELDFDQKVDKAILRTRDEAEFAMFYNQDADARYTEEVLDKIARSSATILRDNDLVEIDGQ 869 Query: 937 -----PGQSMEIDLACNG-VQITGWLPQVQPDGLLRWR-PSLLSVAQGMQ 979 +++ DL V + G + ++ + + + Sbjct: 870 EKSFRQDKALVFDLQNGKSVHVNGTIDRLDTLQINQAVGVVDYKSSDQSF 919 >UniRef50_A4W0M7 ATP-dependent helicase/nuclease subunit A n=61 Tax=Streptococcus RepID=ADDA_STRS2 Length = 1227 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 85/946 (8%), Positives = 218/946 (23%), Gaps = 169/946 (17%) Query: 173 VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFI-CGISALPPVYLQALQALG 231 EY Q +L Q E LP + + + YL Sbjct: 340 EEYNAGKSQIISELRDLGQEVYELTLLKDYQVQALPLLILLRDFVLDFSQAYLDV----- 394 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAY--LAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 I+ ++ I + + ++ + L N Sbjct: 395 -KIKEAAFEFGDIGHFAIRILEENADIRQFFQEKYHEVMVDEYQDNNHSQERMLDLLSNG 453 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA 349 VG+ + + D + ++ + + L ++ + Sbjct: 454 HNRFMVGDIKQSIYRFRQADPMIF------QEKFELYQANPQSGKLILLKENFRSQIEVL 507 Query: 350 VAGVNIE---------EFSRSDNKRPLDPLDSSITFHVCHSPQR---------------- 384 A I E D + + Sbjct: 508 EATNAIFTRLMDRQVGEIKYDDTHSLVAGSPGQ-KIAQPKNEMEYLIYDQQDSANSSTDA 566 Query: 385 ---------EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 E+EV+ ++ + + +DI ++V I ++F + Sbjct: 567 EEETPLTAGEIEVVAKEIIRL-HNEEGADFKDITLLVQKRTHN-DLIMSIFE----KHGI 620 Query: 436 PYAISDR-RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 P + + + L + ++ ++ALL P+ L Sbjct: 621 PIVADGGAASYLQSLEVMIMLDTLRVINNPLNDYALVALLKSPMFRF-------DEDELT 673 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + ++G + + + Sbjct: 674 RISLQAGTGFFYQKMEIAQQASGQ---------------------------------HPE 700 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 + +L + L L WR + + + ++ + Sbjct: 701 LMSEKLKKKITDFLSILENWRAYAKLHSIYDMIWKMFNEKFYYDYVGALPNGSKRQANLY 760 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER----ISQRFLAGPVNICTLMPMRSI 670 + Y LS + + L ++ + + V + T+ + + Sbjct: 761 ALGLRANQFEKTGYKG---LSRFIAMIDRALANDKDLADVQEFLPQNAVQLMTIHKSKGL 817 Query: 671 PFKVVCLLGMNDGVY--------------------------------PRQLAPLGFDLMS 698 FK V L+ ++ P+ + Sbjct: 818 EFKYVFLMNIDKRFNLEDHYQSVIISRKNGLGIQYLADMKDKVNSPLPQVRVLMNTLPYQ 877 Query: 699 QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI---------QDNSERFPSV--- 746 + + + L AL A++KLY+ G + ++N S Sbjct: 878 NNLQELKIANLSEQMRLLYVALTRAEKKLYLVGKGNADKLAEKYDGKKENGVLAQSTRES 937 Query: 747 ------LVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 + + + + ++ LT ++ + E Sbjct: 938 MATFQDWILAIDEAFSGEDLHFKKVFVTDEDLTEEKIGKLTLKSKLEDASLKDIRQSEDI 997 Query: 801 SYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTE 860 + A + L + + + + ++ P + + + + Sbjct: 998 AQALDQLSSVQELNERYKAAIELPSLRTPSQIKKLYEPILEQEGMEVMEKY----QPKRT 1053 Query: 861 DSEIPDTEPFILEGLSRYQINQQLLNAL-VEQDDAERLFRRFRAAGDLPYGAFGEIFWET 919 + ++ + G +L+ L + E R A +I + Sbjct: 1054 FNLPDFSKKPKITGAQVGSAVHELMQRLDLSWLVTEDTVRAALEAVHAEQAIKDKINVQM 1113 Query: 920 QCQEMQQLADR--VIACRQPGQSMEI------DLACNGVQITGWLPQ--VQPDGLLRWRP 969 R + + + ++ + G + + D ++ + Sbjct: 1114 ILDFFDTDLGREILANTDKLHREAPFASLQTDSVSQENFVLRGIIDGYLLYDDHIVLFDY 1173 Query: 970 SLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQ 1015 Q +QL + + + + L E+ Sbjct: 1174 KTDKYDQPIQLSQRYQAQMQLYAEALKKAYKIDRVDCHLILLGGER 1219 >UniRef50_A7VW13 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VW13_9CLOT Length = 1078 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 61/655 (9%), Positives = 147/655 (22%), Gaps = 149/655 (22%) Query: 167 PLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA-------- 218 L + L H + ++ L + S Sbjct: 524 ELRQRLKYALPAKAANAVHIGTFHSLCLKLLTGLRGKVTLAGEAEALDIASQVLRPLGLK 583 Query: 219 LPPVYLQALQALGKHIEIH----LLFTNPCRYYWGDIKDP-------------AYLAKLL 261 L P + LQ + K L C+ Y + + + Sbjct: 584 LSPR--RLLQEVSKWKNGFSEEALEHPGACQEYCRRLSERKLLDFDDLLLEVLREYERDP 641 Query: 262 TRQ-----RRHSFEDRELPLFRDSENAG-QLFNSDGEQDVGNPLLASWGKLGRDYIYLLS 315 R+ ++ + + + +G+P + +G G D Sbjct: 642 DAFPSKPFRQILVDEFQDCNAVQFKLLRYWSKKNGRLFVIGDPDQSVYGFRGSD------ 695 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR--SDNKRPLDPLDSS 373 + P+ ++++ + + + P + Sbjct: 696 ----PACFKRLQEEYPELQAVRLKTNYRSSPEILSCALPVISHNPGGKRELEAFRPPQGA 751 Query: 374 ITFHVCHSPQREVEVLHDRLLAML--------------EEDPTLTPRDIIVMVADIDSYS 419 + F C + + + + AM+ + + + +I ++ Sbjct: 752 VRFLPCENGLSQGIAIAKEINAMVGGIDMLDAQSCVSSQRETSRDFSEIAILYRTHHE-- 809 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + +PY ++ R H + + Sbjct: 810 ---AELLEKCLQRESIPYVVAGREDFLRHDKVRGLTCFFQFLSEPDDLTALAVC------ 860 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 ++ L GY++ Sbjct: 861 -------------------------------LKLLFSCPEDLSESLQRFLSSYQGYSLPK 889 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 ++ + L + + LE Sbjct: 890 KLELLENEYRNVGVLTVS-------LPLFRSIYPLLEKKKPAKLLETAALELSLEQEPAV 942 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 T + + + +I G + + + + V Sbjct: 943 QKLLNTASFYSKTSELLAQLI-LGQESDLTRSCKKNRF------------------SSAV 983 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 + TL + + F VV L G+N G P +G +++R LF Sbjct: 984 TLTTLHGSKGLEFPVVFLCGVNQGNLP-------------LEAQGRMQSIEEERRLFYVG 1030 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 + A+ +L + PS + E+ + + P +A + + + Sbjct: 1031 MTRAKDELILLSSDH---------PSPFLGEIPQELLKREARPAGKAPHPAQQLS 1076 >UniRef50_B8DM59 UvrD/REP helicase n=5 Tax=Bacteria RepID=B8DM59_DESVM Length = 1244 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 62/543 (11%), Positives = 143/543 (26%), Gaps = 65/543 (11%) Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF--NSDGEQDV 295 L +W D + R ++ + L G + Sbjct: 716 LADYTDLLEFWLDQMQNNI---YASPWRHVLVDEIQDLSPLQLTLVRALAPRGGAGFFGI 772 Query: 296 GNPLLASWGKLGR--DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 G+P + +G G D L + PD + ++ + Sbjct: 773 GDPDQSIYGFRGAHGDVAAFL------------REAWPDLSVVALEENYRSSARILDFAG 820 Query: 354 NIEEFSRS-DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE-------------- 398 + + + R + + + + E + +++ ++ Sbjct: 821 GLMQGRSACGPLRAARDMPGELHLFEAPTAEGEAAWIGEQIRGLIGATSHSLLDAGHGRT 880 Query: 399 ------EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 ++ +P DI V+V + +P A+ + A + + Sbjct: 881 RRGTVLDEGGFSPGDIAVLVRVKS-----LIPQLQRTLTRFGVPCAVPEAEAFWADQRVA 935 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 + + P L A + + + R G+D Sbjct: 936 LILGAAGRMLGIGSTSSPA----GPALPAGLSHRRLVAEGVHPSLAD---RLGLDASPFP 988 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 + G S + ++ A L Sbjct: 989 MHRGGDAADNAHGAPEAAAATGSPAVSGSPDGSDGPEASGAAIDPAGGEAPLRP--DAEI 1046 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 R + + L + A +L + + ++A+ Sbjct: 1047 PARDTPHEVDCPPKVLAR-GPLGVAAYLRETPPFDDLFWQSSAFRALSRAYDTHGG---- 1101 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 + L + ++ + + E + + + V I +L + + F+ V L + DG+ P A Sbjct: 1102 -WAGLMNWISLQSELELVRRG--SEKVQIMSLHAAKGLEFRAVFLPALEDGIMPFAGAGT 1158 Query: 693 GFD-LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQ 749 R+ D++R L + A + L++S R E PS + Sbjct: 1159 LTGKPQRDGASPDTRTDMDEERRLLYVGMTRASEGLFLSCAARRQLYGRELRLKPSRFLD 1218 Query: 750 ELI 752 ++ Sbjct: 1219 DVP 1221 >UniRef50_C4GBK5 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GBK5_9FIRM Length = 640 Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 77/547 (14%), Positives = 152/547 (27%), Gaps = 79/547 (14%) Query: 217 SALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL 276 S L + + ++ + ++ ++PA + R R ++ + Sbjct: 167 SDLTEQFARIYWSMKRRDKVLDFGDMLSEARILLEENPAIRDRWSHRFRMILVDEAQDMD 226 Query: 277 FRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLL 335 L VG+ + +G G LL P+ ++ Sbjct: 227 ALQFSLVQILAEGWGNLFLVGDDDQSIYGFRGARPGLLLDI----------RSTYPNAVI 276 Query: 336 HNIQSDILELENRAVAGVN---IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR 392 ++Q++ + A + + + RP I +P+ E E + Sbjct: 277 LHLQTNYRSTRSIVKAAKRLIGHNKMRYAKSIRPDRKEMGRIVVRRLRNPREEAEQIGGL 336 Query: 393 LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR-RARQSHPVL 451 L + V+ + I +P+ + + R H + Sbjct: 337 LRK--------RRGETAVLFRTRAQSTELI-----RVLRQEGIPFYMRRKERKVAGHWLT 383 Query: 452 EAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 + IS SL ED+L +L+ P EE + G + Sbjct: 384 QDIISYCSLALGHRRREDLLRILNRPCRQLPRSCIEEETFEWGELGRRLKEHPGQAKQFL 443 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 A + + LLG A +ES + LL L Sbjct: 444 ELERDMAFLASSSPYAALTYLLGKVGYRAF--------LEESYRGKRSEWDEIEMLLGIL 495 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 RG+ E + + LP+A + Sbjct: 496 MGLARGIRGRGK-EALKSYIKILEEERLLPEAGGADQYDQRRRGMGE------------- 541 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 + L Q V + T + + F V ++ +N+G+ P A Sbjct: 542 ----------NEILAQSNNRAPP----VGLFTFHGSKGLEFDQVHIMDVNEGITPSSRAR 587 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 R +++R +F AL A++++Y+ N + PS + E+ Sbjct: 588 G-------------REALEEERRMFYVALTRAKREVYLYSCL--EMGNQKLAPSRFLAEI 632 Query: 752 IDYIGQS 758 + Sbjct: 633 QEKDQDE 639 >UniRef50_B1YKM8 ATP-dependent helicase/nuclease subunit A n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=ADDA_EXIS2 Length = 1183 Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 94/916 (10%), Positives = 220/916 (24%), Gaps = 178/916 (19%) Query: 192 RFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDI 251 ++E L S + + V + L + + L + Sbjct: 317 DYLEDLRSQLGHVEMIVTLVRSFSAAYLEAKQQRGIVDFSDLEHFALAI-------LEEN 369 Query: 252 KDPAYLAKL-LTRQRRHSFEDRELPLFRDSENAGQLFNSDG----EQDVGNPLLASWGKL 306 +P +A+L R ++ + + SD VG+ + + Sbjct: 370 GEPTDVARLLQERFIEVLVDEYQDTNEVQERILRLVSKSDEATGNLFMVGDVKQSIYKFR 429 Query: 307 GRDYIYLLSDLESSQ------ELDAFVDVTPDNLLHNIQSDILELE------NRAVAGVN 354 + L+ + Q +D + + + + I Sbjct: 430 HAEPGLFLNKFKRFQQTEVGTRIDLTKNFRSRLEVLDGTNHIFRQVMDEAVGEIDYDEAA 489 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHS--PQREVEVLHDRLLAMLEEDPTL--------- 403 + + + E +V+ R++ M+ ++ Sbjct: 490 YLRLGNLGYVDSTQVDPELLLVDQTDTNKEELEAQVIATRIIEMVNDENPYLVFDAKQKR 549 Query: 404 ----TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 RDI+++V + VF LP ++ +SLL Sbjct: 550 FRKCEYRDIVILVRSRGKRVQALVDVFEQY----ELPVYADTTGGYFQATEIQIMMSLLK 605 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 D+ ++L P+ T+ L + Sbjct: 606 TIDNPLQDIPFASVLRSPIFGL----TDRDLGRI-------------------------- 635 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 A +++ + + L + L QL+ WR Sbjct: 636 ---------------RAKSKDGSFYEAAI---LVAKEQTPLGLRVDEALNQLHHWRTEAR 677 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 + + ++ + + + Y L Sbjct: 678 GKSLASLIRSLFDQTGYFEYVGCLNGGRSRQANLNALYERAHQYEASGYRGLYRFLRLIH 737 Query: 640 ELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN---------------- 681 L +R + E S V I T+ + + F V + + Sbjct: 738 RLVERGEDFSEARSLGEDEDVVRIMTIHQSKGLEFPVTIVSQLGKQFNKQDQIQAIQLHK 797 Query: 682 ------DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 D + P + G L + DR + ++ + A+ A++KL + + Sbjct: 798 TYGIALDAIDPVKRLRSGTLLKEVIRREMDREMKAEEMRVLYVAMTRAKEKLILVGAIKG 857 Query: 736 IQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ 795 ++D L++ + + D ++ V A L +++ Sbjct: 858 LEDQ-------LIKWQDQPLDELLLPEMDRRNAKTYADWVVPAVLRNFLLSEDGPRWSFR 910 Query: 796 PGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQV 855 A H ++ + ET+ ++ F + +Q+ Sbjct: 911 IIALDEIAPYQELTKMVEQLEHVRVLEKIDHAGDETLNIQIEAAFA---YQYPYQVATDT 967 Query: 856 NFRTEDSEIPDTEPFI-----------------------LEGLSRYQINQQLLNALVEQD 892 + +E+ TE L G R + + Sbjct: 968 AAKQTVTELKRTEQLERAAFESTHRQSTYYRTPQFLGPTLTGAERGTVLHLAMQLYESGR 1027 Query: 893 DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ-----------QLADRVIACRQPGQSM 941 E + +T + + QL ++ + + + + Sbjct: 1028 SFEEQI-----LDWEQAERISSLEAQTMREAIPELTTFLASDTGQLFEQRLLAGEVYREL 1082 Query: 942 EIDLACNGVQIT-------------GWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYC 988 + + G + + DG Q + Sbjct: 1083 PFTYKIDSARFRSDWHGPSDQAVMQGIVDCLIRDGDTYIL-LDYKSDQVFETTDNQNQAE 1141 Query: 989 ASGGNGESRLFLRKDG 1004 ++L L ++ Sbjct: 1142 VLRTRYATQLNLYQEA 1157 >UniRef50_B1YKK3 UvrD/REP helicase n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YKK3_EXIS2 Length = 724 Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 72/645 (11%), Positives = 166/645 (25%), Gaps = 95/645 (14%) Query: 152 GHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRV 211 +E + Q + ++ Q + + + Sbjct: 121 EGAIEKTATHRPEQPLHKRMILRRIFQEINRSVITEDQMDELLRMISFVKNRLLVTKDIE 180 Query: 212 FICG-ISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIK--DPAYLAKLLTRQRRHS 268 + I P +Y Q + L+ + Y I D A LA R Sbjct: 181 TLKTTIKHFPEIYSAYEQFKLRDPLHPLMDFDDMLTYANTILSQDAALLASYQRRFEYIL 240 Query: 269 FEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFV 327 ++ + + +L V + + G D ++ F Sbjct: 241 TDESQDTSLVQHQLVEKLALPHNNLCVVADDDQTLYSWRGADVSKIIH----------FK 290 Query: 328 DVTPDNLLHNIQSDILELENRAVAGVN-IEEFSRSDNKRPLDPLDSS--ITFHVCHSPQR 384 D PD + ++ + + I+ K+ SS IT + + Sbjct: 291 DTYPDATVLYMEQNYRSSKEIVETANRFIQRNKVRYPKKMYTENPSSRAITVETLPAYED 350 Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD-RR 443 + + +L +++ ++ + S + +A +P+ I D Sbjct: 351 QTRYVIRQLRE------ETNFKEVAILYRNNSSSINIM-----NALDLAGIPFYIKDVDH 399 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 SH VL+ + + L + E + + I++ L+ L Sbjct: 400 KFFSHWVLKDVLHFIELANDPSDVEILAQIH----TKFAGYISKVQLQRL---------- 445 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 Y +++ + + +L + E + + Sbjct: 446 -------------------------------YELQNGENVFDLLLQHVEMKFYQKKQLKT 474 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 + S+ + R P + ++ L + ++ Sbjct: 475 IKSVFAAIQTAR-------PAAALAMIRNELGYEKNLKKMSDS--LGFSIDFLLEMLNTI 525 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 L+ L + V + T + + F V ++ + +G Sbjct: 526 ENVASDLPTSLAFKERILHLEQLMRQAKSNKHQNAVTLSTFHSAKGLEFDRVFMIDLING 585 Query: 684 VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY-ISYIGRSIQDNSER 742 V P + K G ++ LF + A+ L+ +SY +S Sbjct: 586 VLPSSDNIKSY-------KDGQLEEMEEAVRLFYVGMTRARHDLHLLSYRYKS----KPV 634 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 S+ + + + + +E L Sbjct: 635 EESLFIANIRQILNPDQKAQKEARYASRLNEKPAGPLLQVEKNMR 679 >UniRef50_A3DE23 UvrD/REP helicase n=3 Tax=Clostridium thermocellum RepID=A3DE23_CLOTH Length = 706 Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 56/499 (11%), Positives = 129/499 (25%), Gaps = 94/499 (18%) Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLE 318 L R + ++ + E + + + VG+ + +G LL Sbjct: 222 LRERYHYINVDESQDTSLVQHEIIKLVAHPKNNIFMVGDEDQSIYGFRAAFPQALLD--- 278 Query: 319 SSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV---NIEEFSRSDNKRPLDPLDSSIT 375 F PD + ++ + ++ + + N + ++ Sbjct: 279 -------FKKTYPDAKILLMERNYRSTKSIVIPANIFIKQNKGRYEKNMYTENEEGEAVV 331 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 F + + L L + V+ + S P + + Sbjct: 332 FKHVKNRNEQYAYLTSVLK------SESNLSECAVLYRNNISAIPLV-----DYLEYNNI 380 Query: 436 PYAISDRRA-RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 P+ I D H V+ +S + L E + Sbjct: 381 PFYIRDTNLHFFKHWVVNDVLSFIRLALDPCDIEAFGQIYY------------------- 421 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 ++R + Y E+ + Sbjct: 422 ----------------------------KIGAFISREMFEYVAENMGKGKGVMETLLNFP 453 Query: 555 GLIAELVGHLASLLMQLN--IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 L + + L Q+ + + L +E+ + + ++ I Sbjct: 454 NLPEDTCNAVKYLAGQIETIDYLKPLKAIEFIEKECEY-EKYIRRASKEMGYSIDSLNYI 512 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-AGPVNICTLMPMRSIP 671 ++I + L+ S + V + T+ + + Sbjct: 513 IDGLKSIASRVDS--------FDEFFGRLSILKSAIENSGKNRYKNAVVLTTIHSSKGLE 564 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 F V ++ + DG +P + K G+ + +++ LF + A++ L + Sbjct: 565 FDKVYMIDLVDGQFPSSKSISDC-------KEGNDALMEEEVRLFYVGVTRARKYLEL-- 615 Query: 732 IGRSIQDNSERFPSVLVQE 750 I S +N S V Sbjct: 616 ITFSKVNNKPVSVSRFVHR 634 >UniRef50_Q331U3 Putative ATP-dependent DNA helicase n=1 Tax=Clostridium phage c-st RepID=Q331U3_CBCP Length = 592 Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 51/489 (10%), Positives = 133/489 (27%), Gaps = 89/489 (18%) Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL 317 K + ++ + + + S +G+ + G Sbjct: 185 NKYDHTFKYVLVDESQDNNLVQNLLLHEWCKSGNIFCIGDFRQCIYSFRG---------- 234 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN-----IEEFSRSDNKRPLDPLDS 372 F D + N+ ++ ++ N + N + + + Sbjct: 235 SKPDMFMNFDKEWNDATIINLDTNYRSCQDIVNKANNFVRRYYGNYRYYSNSKAYNNSKA 294 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 I + Q E + +++ +L+E P +I V+ Sbjct: 295 HIDINTYMHQQDESNEVVNKIQKLLQEGE--KPNEIAVLYRLNSH-----SHHVEGELRR 347 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 R +PY IS+ + +E +S L L D+ + + + +F Sbjct: 348 RKIPYYISNNSSFFKRKEIEGVMSYLRLIDNPYDNSAFENIFKFRNYPIQF--------- 398 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 + L + + +A + +++ + Sbjct: 399 -------------------------------FSNKLLQDIKSFAGRNNLSLYEAFTLFKY 427 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 + + + + +L + + L + + + + Sbjct: 428 KENWQEKNMKIFENNIEKLRLQKDKNIDICKLIDNVK-LAFNIEEYIECKYSNREDQEDR 486 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 + + + L + + ++ V + T+ + + F Sbjct: 487 LNSIETLKSFVK------GNNLQGFINY---AYNSSNKKKQDNKDCVKLMTIHSSKGLEF 537 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 K V ++G+ DG +P + +S D+ LF + ++ LY+S I Sbjct: 538 KHVFIIGIEDGKFPHK-----------------KSEIIDEARLFYVGVTRPKENLYLSQI 580 Query: 733 GRSIQDNSE 741 + + E Sbjct: 581 NQGNKFIEE 589 >UniRef50_C8NWA9 ATP-dependent DNA helicase n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NWA9_9CORY Length = 1040 Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 110/941 (11%), Positives = 218/941 (23%), Gaps = 185/941 (19%) Query: 139 LVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLE 198 L+ + +W L AL P A + F+ Sbjct: 129 LISGAEQDFAIRELLQGNAADGTGSWPEELRPAL---------PMVGFARQLRDFLLRAV 179 Query: 199 SATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLA 258 T P L G + PV+ A L ++ ++ + Y ++ Sbjct: 180 ERTLTPGQLRDM----GRTHGIPVWSAAGDFLAEYQDV-MALYGARSYSASELVAEVVRR 234 Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG-NPLLASWGKLGRDYIYLLSDL 317 L +D + QL VG + A + G Sbjct: 235 PLPRTWGTVFIDDAQHLDPASGILVNQLIAEADLAVVGGDEEQAVFRFRGASP------- 287 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFH 377 L +N +++ R+ R + D ++ Sbjct: 288 -------------------------LFFKNLDAPTIDLGVSRRTPTARAVIAPDGAMN-- 320 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 + D L + + RD+ V+V + P +P Sbjct: 321 --------NAFVADTLRRA-HLEEGVPWRDMAVVVRSVGMIEP-----LRRTLLQAGVPV 366 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 AI+ + A + L + + LL PV Sbjct: 367 AINPTDLVLGEQRIVAAMLLGLRALNGLDATHWRELLLGPV------------------- 407 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 G D +R L + A+ ++ ++L E Sbjct: 408 ------GGADPVTLRRLLRGLRRWRPEVRAEDTLSELLALRGELPDFGAILTQRELD--- 458 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPV------CRDMLNAFFLPDAETEAAMTL 611 L + L R L +EE L + L A L + Sbjct: 459 -----ILDRIRGVLEAGRTSLDDGGSVEEVLWAVWAQTGLAESLMAIALRGGAAGSQADR 513 Query: 612 IEQQWQAIIAEGLGA-QYGDAVPLSLLRDELAQRL--DQERISQRFLAGPVNICTLMPMR 668 A+ + + + ++ R + + V + T + Sbjct: 514 DLDAMMALFDAAGDFTERRPTATIEAFIAHIEEQELPTGVRDRRTAVPDAVPLLTAHGVA 573 Query: 669 SIPFKVVCLLGMNDGVYP-------RQLAPLGFDLMSQKPKRGDR-----SRRDDDRYLF 716 F V + + + +P DL+ Q R ++R LF Sbjct: 574 GREFARVIVSEVQELSWPTLSETGTLMRQEDLIDLVDQGIDPATPVSHTVDRLKEERRLF 633 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY---------------------- 754 A+ A +++ ++ + + PS VQ+ D Sbjct: 634 HVAVTRATEQVIVTAVDA-PDGDEVIEPSRFVQQFADARGTIPEHVSTGTAASGAAEQQT 692 Query: 755 -----------IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA 803 + H + E + + Sbjct: 693 LFDGVDTSTTGREEVHVDVAPVRVLAVEDIVAELRRAITDESSSEDVKLQAARQLARLAE 752 Query: 804 REWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSE 863 A E P + ++ P+R + Sbjct: 753 AGVPGADPGQWWGIREASISEGVEPPGRLSPSRIEGLLECPMRNVLER------------ 800 Query: 864 IPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQE 923 D P + ++R + A+ D E A + + Sbjct: 801 --DVAPASSDAMTRGTLAHYFFEAVGNGADVELAQADTLEAYRALFTVPSWKEVSDLGE- 857 Query: 924 MQQLADRVIACRQPGQ--------SMEIDLACN-GVQITGWLPQVQPDGLLRWRPSLLSV 974 +L R + + + +D+ G++I G + +++ + L Sbjct: 858 FTRLLGRAAQWVEETRGTFELVDTEVPVDVEVAPGLRIGGRIDRLEREESGAVHIVDLKT 917 Query: 975 AQGM----------QLWLEHLVYCASGGNGESRLFLRKDGE 1005 + QL+ L + + GE Sbjct: 918 GKNHPSAAEAEENPQLFAYQLALSRGALREGTDASVATAGE 958 >UniRef50_A3Z091 Putative ATP-dependent DNA helicase (PcrA) n=1 Tax=Synechococcus sp. WH 5701 RepID=A3Z091_9SYNE Length = 641 Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 53/513 (10%), Positives = 127/513 (24%), Gaps = 91/513 (17%) Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQEL 323 ++ + L VG+ A + G DY + + Sbjct: 208 YDAVLVDEMQDTNPLQWRLLQPLVKHTSLFCVGDDAQAIYAFRGSDY----------RFI 257 Query: 324 DAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDP-LDSSITFHVCHS 381 F ++ P++ + + ++ +++ S + +K + Sbjct: 258 HDFTELVPNSEKLTLTQNYRSPSEFLGISNWLLKDSSINYDKELWSELEGGKPNMRIFSD 317 Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD 441 P E E + D++ + + R ++M + SA A R +P Sbjct: 318 PFEEAEFIADKISE--DHGRGIPYRSNLIMFRS-----SVWRKALDSALAKRKIPVTYYG 370 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 + + +S L + + L L V + +N Sbjct: 371 GFSFLQARHVRDIVSTLRILHNPVDDIAWLRYLQV--FPGIGGEGASEIVNRFADLNALA 428 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 R + + + PA+ T ++ + E Sbjct: 429 ERIDLLKASDPKFRRPASAMQTIAQKISANMANLIGEITAILEDEFSKL----------- 477 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 + + + A I Q Sbjct: 478 -------------------------------------YRDEWPSRKADVPILQALAERED 500 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 ++ L+ + + D V + T+ + + +V + + Sbjct: 501 SISTFL--ESYALNPFTEGFQRGGDS-------NTDYVIVSTIHSAKGLESDIVYVPALQ 551 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 G YP + +++R AL A+ +L +S + Sbjct: 552 VGHYPPSYTKS-------------QDEFEEERRCLYVALTRAKTELNLSKALIATYQRIP 598 Query: 742 RFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 + + +QE+ + + + S Sbjct: 599 KGSAYFLQEMPEQLVDLEIKHVESVNAPSLSLE 631 >UniRef50_C8RQU8 ATP-dependent DNA helicase II n=3 Tax=Corynebacterium RepID=C8RQU8_CORJE Length = 1205 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 104/907 (11%), Positives = 207/907 (22%), Gaps = 166/907 (18%) Query: 258 AKLLTRQRRHSFEDRELPLFRD-------SENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 R R ++ + + S VG+P+ + + G Sbjct: 277 QDQRRRFRVVMLDEYQDTGHAQRVMLRSLFGDGRAGEGSFSAMAVGDPMQSIYQFRGATA 336 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQS--DILELENRAVAGVNIEEFSR-----SDN 363 L + A LL + ++ +L++ NR S+ Sbjct: 337 SN-LEKFRTDFPNAAGEPAEKLQLLTSWRNPTMVLDMANRVSTWSMERSTESTGRLVSEL 395 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT----------LTPRDIIVMVA 413 + + ++E++ L D+L + + + P V+V Sbjct: 396 RPRPGATEGESAVAFFDEREQELDWLADKLQSQWRDHQRKLETADDPAKVKPFSAAVLVT 455 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 P + +R +P ++ P + ++L + +L L Sbjct: 456 VNKDAVPIYEK-----LVERGVPADMTAGPGLLYIPEVADVFAMLRVLVDPTDDVALLRL 510 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD-------------DNVRELELPATG 520 + R++I L L + + R + +N+ L P Sbjct: 511 ----LTGPRWNIGAADLAVLTRRAEQIAKRGAGEAGAVDDAAMERQRQENIELLRTPGVR 566 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 L + + + L E G+ AE LA L +L RR + Sbjct: 567 DELIEEVLEAIPNATEFSVGLIDALADLTDAEQMGMSAEGSRRLAQLGRELGYLRRH-SL 625 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE--QQWQAIIAEGLGAQYGDAVPLSLLR 638 + L + + ML + L Sbjct: 626 GKNLPDLVADIEKMLGVRTEVLTRWHRRPEQAIGTSHLDKFAQIVRDVSRTGSATPKALV 685 Query: 639 DELAQRLDQERI----SQRFLAGPVNICTLMPMRSIPFKVVCLLGMN-----DGVYPRQL 689 + L +E + V I T+ + + + +V + + D PR Sbjct: 686 EYLLAAQSEEDGLDPGEVQRKDNTVQILTVHKAKGLEWDIVAVPHASRERYGDYSQPRSE 745 Query: 690 APLGF----DLMSQKPKRGDR--------SRRDDDR-----------------------Y 714 + S + GD + +DR Sbjct: 746 SAWTIKARVLPSSLRGDAGDDPGAYPTLVTDDAEDRSGHTKAYKEFNKQVSRFRAKENDR 805 Query: 715 LFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE--------- 765 LF A+ +++ L++S + PS+ + L +Y+ QS E Sbjct: 806 LFYVAITRSERVLFVSGSAFKESASKGNDPSICLTLLHEYLEQSGVAANVEHWSGMGMYY 865 Query: 766 -ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 L+ + + + + E + A + +P Sbjct: 866 KDLDTRLDNPDLPLEDKLMLPTPQINGERGDYEEERKERDTVATAGASWPSPAPAMTRPG 925 Query: 825 PFTLPETVP-------LETLQRFWAHPV--------------RAFFQMRLQVNF------ 857 E V + Q + P + L + Sbjct: 926 VAEGAEQVRKEIEAVSQQEEQDGQSRPAPGATADGAPTTLAEAWDLETNLLLEEFSAMDN 985 Query: 858 -------------RTEDSEIPDTEPFILEGLS-----------RYQINQQLLNALVEQDD 893 S D + F L R + +Q Sbjct: 986 AELVVPLNVRMTATEAVSLRKDNQEFALRARRPIPLEPKPYAKRGTAFHNWVEERYKQVS 1045 Query: 894 AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD-RVIACRQPGQSMEIDLACNGVQI 952 LP + + + + G Sbjct: 1046 L-------LDEDQLPGASDATLEDPYLETLKDAFLRSEWADRQPESVEGAYSVTIGGHVF 1098 Query: 953 TGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFP 1009 G + V D W + + L Sbjct: 1099 EGRIDAVFHDGTDPTAGWIVVDWKTGRKPTGADMDAAAMQLAVYRLAWAKLLSAKLGVEV 1158 Query: 1010 PLAAEQA 1016 P +A Sbjct: 1159 PAENVRA 1165 >UniRef50_Q1GAB0 ATP-dependent helicase/deoxyribonuclease subunit B n=3 Tax=Lactobacillus delbrueckii RepID=ADDB_LACDA Length = 1179 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 114/1078 (10%), Positives = 268/1078 (24%), Gaps = 197/1078 (18%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAA-- 58 M+++ + D L+ + R L P + I+V + + + + Sbjct: 1 MIKIITGRQSDPLQTEIIGRAARNYLAQPGKDTFIIVPNHIKFNTEVAAIGKVAQLQGRE 60 Query: 59 -----NIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRH 113 N+ + W F + +P+ L + +L Sbjct: 61 ETSVKNLHVLSFSRLAWFFFKKADLLMPE------------------SLDDAAATMILEQ 102 Query: 114 YLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALV 173 + D+ LF+ S + + Q VY L + L E A A Sbjct: 103 IIDKRRDELLLFKNSHANSGMIKQ--VY-STILQVHTGQLDLGNLLERAADPAV------ 153 Query: 174 EYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKH 233 +L + L V + + +Q Q L Sbjct: 154 ------------ALDLDNETRDKLHDLDLIYQDFLEIVSEKHFATKDELNIQLNQLLASR 201 Query: 234 IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQ 293 + + +Y D + K+ + + + + + + Sbjct: 202 PD----LVSQASFYVTDFSHFSIQEKMTMQLLAAFASEMTFAFKTADGSVIEPAAGEYDY 257 Query: 294 DVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 V + + + + I + A Sbjct: 258 VVQ------------------------KTIKDLTGYFSAHDFAWEREKIASPASPARDLN 293 Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA 413 + + ++ S E + + + RD +V+ Sbjct: 294 QAWQGQGQPDLN-------NLQLVKADSRYAEAYFVARTIYDEVAL-KGCQYRDFLVLAP 345 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 ++ Y ++ + +P+ ++ + HP++ +L L + +L++ Sbjct: 346 NLQEYETYLAPI----LRQNQIPFFDDLQQQMKYHPLVLLLENLGKLLQQAGDTPALLSI 401 Query: 474 LDVPVLAARFDITEE----------GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 + +L + + + + L + GI++ + +++ Sbjct: 402 MKTRLLIPDWYLEGDAEAGEAAYLRDIDQLENFALAHGIKYSLWQKPLKDFTKA--QVIA 459 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + L + + + + + + Sbjct: 460 LDQEQYQKWLDRLDKLRDFFVSKISRLARQLKSEKDSMTAVKLFFD----FLVKNGVSAR 515 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 LE W L A D + +++ + L + + L Sbjct: 516 LEAWR------LKASESGDLQQAQQPEQCWNLLLSLLKDYLLVNP-ENFAWADFFKMLTA 568 Query: 644 RLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 Q + + V + +++ +K V ++G +G P+ F Sbjct: 569 AFSQANFATIPASLDAVTLSEYGMVQTSGYKQVFIIGAANGSLPQINDQPNFLTTENLAS 628 Query: 703 RGDRSRRD------------DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 D +D D Y F AL A ++YISY + +N PS+ + Sbjct: 629 LADFFDQDAYLEDSQQLRNLDQEYQFGNALALASDRVYISYPVIN-SNNDLLDPSIYYKR 687 Query: 751 LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 L+ + Y D ++ L T E S + Sbjct: 688 LLKLVNGREYRQRDLPDIAEKDRTEFARQLLLFLTSPRASLGYLAYAEENSAQSPLVAKL 747 Query: 811 --------------SQAGKAHSEFVQPLPFTLPETVP-------LETLQRFWAHPVRAFF 849 G A+ Q + L E + + L+ ++ + F Sbjct: 748 VELSRQYEEEKAEEIAEGMAYDNNPQDISEDLAERLYGKDLLSSVSQLESYYQNSFEYFL 807 Query: 850 QMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD----------------- 892 L++ R E+ L + + L+++ Sbjct: 808 NYGLRLRPRAENE---------LNAIQSGNYFHRTFELLLKEMQKKNIEIDKLSELDLEL 858 Query: 893 ---DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEI--DLAC 947 + F E ++ + ++A +Q + +LA Sbjct: 859 LLKQVRSEILQEPLYQQFLRDPFNEYLFKVFDKTTSKVAQSYRRKQQENKMRATYGELAF 918 Query: 948 NG-------------------VQITGWLPQVQ---PDGLLRWRPSLLSVAQGMQLWLE 983 + + G + +V D + + + Sbjct: 919 GPAEKLAGLVLPLKKFAGQRKISLRGKIDRVDLFNGDQHVLGQLIDYKSSDHSFNLAR 976 >UniRef50_Q2NB36 Helicase n=4 Tax=Sphingomonadales RepID=Q2NB36_ERYLH Length = 994 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 108/1003 (10%), Positives = 233/1003 (23%), Gaps = 157/1003 (15%) Query: 108 FTLLRHYLTDDS-DKRKLFQLSSKAADLFDQYLVY---RPDWLAQWETGHLVEGLGEAQA 163 +LR + DD+ LF L+ + A D+ LV + L + A+ Sbjct: 116 AEVLRDVMGDDAPQGASLFVLARETAQTMDRLLVEDIGPEELLQD--RVLDLFDRDLAKH 173 Query: 164 WQAPLWK----ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISAL 219 WQ L + + A R E P + G+++ Sbjct: 174 WQDNLRRFAKVQQFWLAELGERGALDAAARRNRLFERAAKRWKAEPPATP-IVAAGVTSA 232 Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 P + L+ + + + ++ + + + A F + Sbjct: 233 APALARLLRVVSELPQGAVILPDLDLTMDAAVWEELGRAGAPAASGGAPFAKDDAVTHPQ 292 Query: 280 SENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQ 339 L S E+ + Sbjct: 293 YHLKLLLN---------------------------RMGVSRDEIQPWHRKGSGAARSERS 325 Query: 340 SDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 + + A + I +P+ E + + + L E Sbjct: 326 HAVSAVFLPPEASKVWVDLPSEKRHLS------GIRLMELPNPEAEAQAVALAVRQALAE 379 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 R + V+ D + + + S R F+ L Sbjct: 380 PE----RRVAVITPDRN-----LARRVVHHLRRWNIEADDSAGRPLAQTTAGRLFLLLAE 430 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + + ++ALL P++ Sbjct: 431 VMGTNAAPVPLMALLGHPLVR------------------------------------QGE 454 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 + W L + ++ P V + L G Sbjct: 455 ERRQWLRDLRALERKLRGSRPAPGLAAIRPVA-----REAQVIDWWEEVEALLGPLAGTD 509 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 L + L + A + + + + + + Sbjct: 510 DPLSLADCLDTLAAVGEALCGEALWAQEDGRALSATVEDLRQHARAVG--TQIRRADAHA 567 Query: 640 ELAQRLDQERISQRFLAG-PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS 698 L +DQ + + V I L+ R +V G+N+G +P + + Sbjct: 568 ILTDAMDQVAVRPPYGGHPRVAIYGLLEARMSRADLVICAGLNEGSWPGRPSVDPLLAPP 627 Query: 699 QKPKRGDRSRRDDD-RYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 G A ++ +S R + PS + + +G+ Sbjct: 628 VLRALGVPGADFRIGLSAHDLAGALGAPEVLLSRSERDAEG--PAIPSRFLLRVKALLGE 685 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH 817 + L E + A + Sbjct: 686 LLERYEERDLPR---------------------------------LAERIDDAPLEPRYQ 712 Query: 818 SEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR 877 P E + + L R + P + + L++ P + Sbjct: 713 RPEPMPSAEERRERISVTALDRLRSDPYQFYASAILRLKELDGLDAEP-------TPAWQ 765 Query: 878 YQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI---AC 934 Q+ +L E + + + + ++ + ++ +A + Sbjct: 766 GQLAHDILEHWHEHGGSLPDIAKAKLTEMDHHPLTRALWEPRLMKALEWVASEIEGDMDR 825 Query: 935 RQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNG 994 ++ GV I G + ++ + + + G Sbjct: 826 TPVLWEKWGEIEHRGVTIFGRIDRLDRLADGTFAVVDYKTGSPPSG--SQVEAGYALQLG 883 Query: 995 ESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQN 1054 L + K G + A A Y S + + E+G +++T Sbjct: 884 TLGLMVGKGGFAKHGIHGAASAFEYWS--LAKAKSATH-------ETGFGYIETPLKISG 934 Query: 1055 DAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQL 1097 D ++ K + + GD+ + RL Sbjct: 935 KRSGIDP---EEFLPKAADYLDDALSRWVLGDEPFTARLNPDA 974 >UniRef50_C4ZAR0 ATP-dependent DNA helicase n=4 Tax=Clostridiales RepID=C4ZAR0_EUBR3 Length = 617 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 50/505 (9%), Positives = 122/505 (24%), Gaps = 99/505 (19%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 P LA + + ++ + E L VG+ + + G Sbjct: 193 RPDILALWQNKYKYILIDEFQDINRLQYEIIKMLAAPQNNLFIVGDDDQSIYRFRG---- 248 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDIL---ELENRAVAGVNIEEFSRSDNKRPLD 368 + + F PD + ++ + ++ ++ Sbjct: 249 ------SKPEIMLGFEKDYPDAKRILLDTNYRCGRYIVEASLNLISHNRERFDKKIIAAS 302 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + +TF + + E L + ++ D V+ I Sbjct: 303 KSKAPVTFADFENRRDENIFLIRDIDKKIKA--GAVFSDFAVLFRTNTQPRQLI-----E 355 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 +P+ + Sbjct: 356 QLMSYNIPF--------------------------------------------------K 365 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + R + R L ++ A + + Sbjct: 366 TKDNIPNIYEHWIARDLFTYQRIAGGSRDRADFLQIMNRPKRYLSRDSLCDATVAFDEWI 425 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 + IAE + L + ++ + + + AE Sbjct: 426 KLFDEKPWIAERIEKLEYDMKLIS----RMNPYASINYIRRGIG-----YDDFLAEYAEY 476 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI---SQRFLAGPVNICTLM 665 + ++ I+ E + + + + Q ++ S+ V + TL Sbjct: 477 RNINKEDLFDILDEI-QSGAKGFATYEEWYEHIREYTKQMKLMALSKESDPNAVTLATLH 535 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 + + F+ V ++ N+G+ P K +++R LF + A+ Sbjct: 536 SSKGLEFENVYIIDANEGIMP-------------YKKAVLEKDIEEERRLFYVGMTRAKT 582 Query: 726 KLYISYIGRSIQDNSERFPSVLVQE 750 L + + ++ S V+E Sbjct: 583 SLSVYSVKS--VNDKSAQASRFVRE 605 >UniRef50_B0CJK1 Double-strand break repair protein AddB n=44 Tax=Rhizobiales RepID=B0CJK1_BRUSI Length = 1052 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 118/1016 (11%), Positives = 247/1016 (24%), Gaps = 160/1016 (15%) Query: 126 QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPL-WKALVEYTHQLGQPRW 184 L+ A L DQ A+W + A W+ L + +V Sbjct: 154 WLARDLAALMDQVETDG----AKWSKLTSIAPDDLADWWRVTLGFLDIVTRLWPDILAER 209 Query: 185 HRANLYQRFIETLESATTCPPGLPSR--VFICGISALPPVYLQALQALGKHIEIHLLFTN 242 +N + + S P V G + PV + + + + ++ Sbjct: 210 RLSNPAAHRNDLIRSEVKRLRDHPPAGPVIAAGSTGSIPVTAELISTIASLPQGAVVLPG 269 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS 302 L + L + NP + Sbjct: 270 --------------LDRDLDEAAWKLLGEAGD----------------------NP--SI 291 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 +G LL + + ++ ++ P ++ I+ R + D Sbjct: 292 FGHPQYGLHKLLQAIGALRQDVDVLEDMPRAK--RLRERIVSEALRPAETTDAWGLLNRD 349 Query: 363 N---KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 L + I + + E + L L ++ ++ AD + Sbjct: 350 PDMQPSALREAAARIDLVEASNEREEALAVALALRDALADERKTA----ALVTADRNLAR 405 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + A + S R + L+ + +LAL+ P+L Sbjct: 406 RVVG-----ELARFGIDADDSGGRHLRDVETATLLRLLVETVFNPGNPVALLALVKHPLL 460 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + L + + R G + +L R L A + Sbjct: 461 RLGGARIDRRLA--GETLELVAFRGGTGRAGILDLPAF----------FERRLKESADQP 508 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 Q W + + D L L+ + L + + E + N Sbjct: 509 WQPAWHTTVTQDMIEAARG-LCESLSVAVEPLAPFVTANRRTDIGEIARATVEALENMAR 567 Query: 600 LPDAETEAAMTLIE-QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG- 657 A + ++ + + + ++ L + E + Sbjct: 568 DETGSVAAFYSGERGEKLASFLRGLISSEAELDFEAMEWPAILDALMAGETVKPHPGGHP 627 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 + I + R + + G+N+G +P + F K +R L Sbjct: 628 RLFIWGALEARLQTVDAIVIGGLNEGSWPTKTRNDPFMSRPMKAMIALDPP---ERRTGL 684 Query: 718 EA----LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 A + + ++ RS DN+ PS +Q L +G Sbjct: 685 AAHDFQMALGMDHVVLTRSQRS--DNAPTVPSRWLQRLETVLGADVTNEMRGR------- 735 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP 833 G R + + A P P+ Sbjct: 736 -----------------------GTRFIHWSREIDRAEDVPFVRKPEPAPPVAARPKHFS 772 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL----NALV 889 + ++ P F + L++ P R + +L A + Sbjct: 773 VTEIETLRRDPYAIFAKKILKLRPLEPLIRDPA-------AAERGTLFHDILGHFTQAAI 825 Query: 890 EQDDAE------RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQS--- 940 + + L R A DLP ++W + Q Q Sbjct: 826 DPLAPDAAEKLMELGRILFADMDLPLE-IEAVWWPRFTALIPQFLQWERERAYKVQERFA 884 Query: 941 ----MEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGES 996 + ++ G+ ++G ++ H++ + Sbjct: 885 EIASQKREVENLGITLSGRADRIDLMRDGTAEIIDYKTGSTPSPKQAHVLLS-----PQL 939 Query: 997 RLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDA 1056 L F + +A + G P ES ++ + Sbjct: 940 ALEAALLARGAFLDVGPVRACDL--TYVRLKAAGEVKP-----ESILKI------SRPPS 986 Query: 1057 MLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRF 1112 + ++A + Q + E + R + ++ Sbjct: 987 EKTAPALGEEAWQRLAQLLA--EYQKPEK--GYLSRALPFRETDLTGDYDHLARVL 1038 >UniRef50_A3TGM2 Putative ATP-dependent DNA helicase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TGM2_9MICO Length = 1047 Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats. Identities = 93/825 (11%), Positives = 205/825 (24%), Gaps = 88/825 (10%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 L L ++ R E + + G +G+P A+ G D L Sbjct: 234 ARSLTAGLRLVVVDDAQEMTPAALRLLEVLRHVAPAAGIVLIGDPDSATQTFRGGDPTLL 293 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS 373 + + V H + +L + N + + + + S Sbjct: 294 AREWAVLGDGPTVVLPRS----HRLPEGLLSVTNAVAGHIGVL-GDVAHRRAEACVEGGS 348 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 H+ S +E + RL A D + D+ V+V + A Sbjct: 349 SEVHLLRSASQEAGFIAARLRAAHLLDD-VPWSDMAVIVRGQSRSAG-----LRRALQSS 402 Query: 434 YLPYAISDRR-ARQSHPVLEAFISLLSLPDS-------RFVSEDVLALLDVPVLAARFDI 485 +P + ++ + P + ++LL + + L +L P+ AA Sbjct: 403 GVPVSAAEAELPVRDEPSVRPLLTLLQVVADLALGRAEDVPVDVALDVLVSPLGAADPVE 462 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 R LR+ ++G D+ L PA G + +G + + Sbjct: 463 LRRLRRALRREELDAGGSRTSDELIAEVLLRPAVHDRLGIEGRSVQRIGRMIRAGVEACG 522 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 +V ++ + WR D + A A Sbjct: 523 AVEGEWGPGVSAEGILWAMWDASRLAGQWRETALGGGAAGARTDRDLDAVLAVLRAAATY 582 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL--AQRLDQERISQRFLAGPVNICT 663 + + ++ V++ T Sbjct: 583 GERL--------------------PGSSPEAFLQHVLGQDVPGDTLAARAPTGESVSLLT 622 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK----------PKRGDRSRRDDDR 713 + +V + G+ +G +P + + R D+ Sbjct: 623 PQSAAGRQWPLVVVAGVQEGSWPDLRLRGSLLGSQDLVDVVRGRAGGHRAALAAVRHDET 682 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 LF A+ A + L ++ + + PS + +++D + + Sbjct: 683 RLFHVAVSRASRSLLVTAVRSEDE-----QPSPYL-DVVDPLPDDADRREASDWARPVTL 736 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH----SEFVQPLPFTLP 829 + L + AR +P A A S+ P Sbjct: 737 PALVGALRRDVVSDDMRRRGGAITGLARLARAGVPGADPASWWVLHGLSDERPRRGPADP 796 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL-NAL 888 V + F + ++ ++ + ++ Sbjct: 797 VRVGPSAIDGFTSCQLKWALTKVGGDGP-------------MIGQRDIGTLIHEIAAEGD 843 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ-----SMEI 943 + LP G ++ + +LA G + Sbjct: 844 ADAATMRATLDERWPRLGLPQGWSTDLKRRQAEGMVDRLARFFDENTAVGWQRLAAESRM 903 Query: 944 DLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKD 1003 + + ++G + ++ R + G + + Sbjct: 904 KVELGRIVLSGTVDRLDVSPSGEVRVIDYKTGSSKPKASDVP----RHGQLGAYQLAVIE 959 Query: 1004 GEWRFPPLAAEQALHYLSQLIEGYREG----MSAPLLVLPESGGA 1044 G + + + L + + + + PL + G A Sbjct: 960 GGFEDVEVPQSSSGAALLHVGKAAGKATTMQVQPPLAEDEDPGWA 1004 >UniRef50_A2RH77 ATP-dependent helicase/nuclease subunit A n=4 Tax=Lactococcus lactis RepID=ADDA_LACLM Length = 1203 Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats. Identities = 82/888 (9%), Positives = 197/888 (22%), Gaps = 170/888 (19%) Query: 190 YQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWG 249 + + IE ++ + I + + + ++ +I Sbjct: 331 HGQLIEKYQNQAFEIASDLQKFIIDFYK--TYLERKKNENAFEYSDIAHFAIEILEE--- 385 Query: 250 DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD 309 +P L ++ + L N VG+ + +G D Sbjct: 386 ---NPDIRENLREHYDEIMIDEYQDTSHTQERMLELLSNGHNLFMVGDIKQSIYGFRLAD 442 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE------------ 357 L +S + N L ++ + +I + Sbjct: 443 PGLFLEKYKS------YDQAENPNQLIRLKENFRSRGEVLNFTNDIFKHLMDEKLGEMTY 496 Query: 358 ---------FSRSDNKRPLDPLDSSITFHVCHSPQREVE------------VLHDRLLAM 396 + + ++ + E+E + + Sbjct: 497 GKEEALVQGNISDYPVEAEKDFYPELLLYKENTSEEEIEDSEVKISDGEIKGAAQEIKKL 556 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR-ARQSHPVLEAFI 455 + + + P+DI ++V + +P + + R + + Sbjct: 557 I--EYGVEPKDIAILVRSKSN-----NNKIEDILLSYDIPVVLDEGRVDFLKSMEVLIML 609 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 +L D+ ++A+L P+ E+ L + + W Sbjct: 610 DVLRAIDNPLYDLSLVAMLRSPLFG----FNEDELTRISVQGSRDLRFW----------- 654 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 ++LL E E ++ L L + + WR Sbjct: 655 -------------DKILLSLKKEGKNPELINL-----------SLEQKLKAFNQKFTEWR 690 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 + + + + + ++ + Q + Y Sbjct: 691 KLVNKIPIHRLLWKIYTETYYFDYVGALKNGEMRQANLQALSVRAESYESSGYKGLFKFV 750 Query: 636 LLRD-ELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 L + + Q D ++ + V + T + + F V L+ + R L Sbjct: 751 RLINKFMEQNNDLASVNIKLPQNAVRVMTFHKSKGLEFDYVFLMNLQSRFNDRDLKEDVI 810 Query: 695 DLMS----------------------------------QKPKRGDRSRRDDDRYLFLEAL 720 R+ ++ + A Sbjct: 811 LSREHGLGMKYIADLKAEPDVITDFPYALVKMETFPYMVNKDLKQRAALSEEMRVLYVAF 870 Query: 721 ISAQQKLYISYIGRSI------------------QDNSERFPSVLVQELIDYIGQSHYLP 762 A++KLY+ + + R S Q I + + LP Sbjct: 871 TRAKKKLYLVGKIKDTDKKAGLELYDAATLEGKILSDKFRNSSRGFQHWILALQNATKLP 930 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA--SQAGKAHSEF 820 + + K T ++ + S++ E A H Sbjct: 931 MKLNVYTKDELETEKLEFTSQPDFKKLVEESEKFDNIMSFSDEIKEAQKIMNYQYPHQAA 990 Query: 821 VQPLPFTLPETVPLETLQRFWA----HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLS 876 + P V + ++ PV F + ++ + D P + Sbjct: 991 TELSSIQTPSQVKKRSYEKQLQVGEVQPVSEFVR--------VKNLDFSDFGPKKITAAE 1042 Query: 877 RYQINQQLLNAL----VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVI 932 + + + + E Q + Sbjct: 1043 MGSATHSFMQYADFSQADLFSFQATLDEMGFDEKIKNQIDITKILTLFDTEFGQFLSENV 1102 Query: 933 ACRQPGQSMEI----DLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 + + A + G + Sbjct: 1103 DKTVKEAPFSMLRTDEFAKEQYIVRGICDGFVKLADK-IILFDYKTDR 1149 >UniRef50_B0NBE0 Putative uncharacterized protein n=9 Tax=Clostridiales RepID=B0NBE0_EUBSP Length = 615 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 69/554 (12%), Positives = 147/554 (26%), Gaps = 124/554 (22%) Query: 216 ISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELP 275 L Y +A Q L K +L CR + +K L K + R ++ + Sbjct: 164 FRELYQAYEEAKQRLRKLDFEDMLLM--CRDLF--LKRRDILEKWQQKFRYILVDEFQDV 219 Query: 276 LFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFV-------- 327 + L + L + Q + F Sbjct: 220 NQAQYDVIRMLAAPED--------------------NLFIVGDDDQSIYGFRGAKPGIMM 259 Query: 328 ---DVTPDNLLHNIQSDILELENRAVAGVN---IEEFSRSDNKRPLDPLDSSITFHVCHS 381 + P+ + + + + + +I Sbjct: 260 EFANDYPNARQILLNVNYRSSAHIVNGALRVIGHNKTRFDKEIAAKQKAGETIHVQEVKD 319 Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD 441 P E + +R+ + + + V+ + + +P+ + + Sbjct: 320 PVEESRYVLERIQEY--QSQGIPYSQMAVLYRT-----SLDARMLSETLMEYQVPFTMKE 372 Query: 442 RR-ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE---GLRYLRQWV 497 R H + S L + L + + P D E LR + Sbjct: 373 RLNNIYEHFIGTDISSYFHLAKGEQERKYFLQIANRPNRYIGRDSMSESKVTYETLRNFY 432 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 + W + + E ++ T + + + E+ Sbjct: 433 CDKA--WMQNRIDQLEWDMKMICNKTPYAAIQYIRKSMGYDEYLREYAV----------- 479 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 L+ L ++ + + ++EW Sbjct: 480 -YRQMQPEELMAVLEEIQQNSKEYQSIDEWFE---------------------------- 510 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 + ++ L +Q R S+ V + T+ ++ + + V + Sbjct: 511 ---------------HVERYKEMLT---EQARKSRSQGGEGVALMTMHGVKGLEYDTVFI 552 Query: 678 LGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ 737 + N+G P + A D +++R LF A+ A++KL ISY+ + Sbjct: 553 IQGNEGSIPYKKAKSPDD-------------IEEERRLFYVAMTRAKRKLIISYVK--EK 597 Query: 738 DNSERFPSVLVQEL 751 + PS V EL Sbjct: 598 NGKSLSPSRFVNEL 611 >UniRef50_C6PW57 UvrD/REP helicase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PW57_9CLOT Length = 1112 Score = 152 bits (382), Expect = 9e-35, Method: Composition-based stats. Identities = 78/873 (8%), Positives = 213/873 (24%), Gaps = 189/873 (21%) Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-------EQDVGNPLLASWGKLG 307 + R + ++ + ++ D VG+ + +G G Sbjct: 245 NLRERYRNRYKTLLVDEFQDTNGIQKNILYKIAADDNGRLINKKIFIVGDFKQSIYGFRG 304 Query: 308 RDYIYLLSDLESSQ-ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRP 366 DY + + E+ + + + I + + KR Sbjct: 305 TDYTIFKQVSKDIENEVSLSTCYRSKSEIIKGINSIFNELIDGYQPLKCPKDEEIKEKRI 364 Query: 367 LDPLDSSITFHVCHSPQREV------------EVLHDRLLAM------------------ 396 I + EV E + L A+ Sbjct: 365 KLLTYEKIR-RTSDNVYTEVKNMLQGKESKKFENIQQALKALKDSNKDITVKKNKEGMAV 423 Query: 397 -----LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVL 451 + D L +DI ++V + R +PY I + Sbjct: 424 IKAIKILRDKNLEFKDICILVRSRS-----VIPDIEEELKRRNVPYCIIGGVGFYQKAEV 478 Query: 452 EAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 + ++L + F E + +++ Sbjct: 479 DEILNLYKVIVRGFSGE-----------------------------------FTYEENKN 503 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 L + L +M + S + ++++ Y++ G+ +E + + ++L +L Sbjct: 504 FIQVLRGSLFEISDDTLLKMNIEKEESSLENLYEALKVYED--GMHSEKLLNTVTILEKL 561 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 + L+ + ++ + C + + + ++ E Sbjct: 562 AGLKEKLSVVQIIQAIIKECNVFEIMLC------QDNGLQKFRNIEKLLQEAEKFDREQL 615 Query: 632 VPLSLLRDELAQRLDQERISQR-----FLAGPVNICTLMPMRSIPFKVVCLL-------G 679 L + + ++ + V I T+ + + FK V + Sbjct: 616 FTLEQFVNYINLLDEENGDDSEAALDTEDSEAVKIMTIHQSKGLEFKGVIIPKIHSDLLS 675 Query: 680 MNDGVYPRQ-LAPLGFDLMSQKPKRGDRSRRDDD-------------RYLFLEALISAQQ 725 M+ P L + ++ L A+ A+ Sbjct: 676 MSKKDKPNLVYNKNSIILSKDLENVELTTPEYEEYLNSKLEKEIEETERLLYVAMTRAED 735 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 + ++ D + P +++ D I + + + A + Sbjct: 736 YVILTG----GDDGKDPTP---IKDETDKIKELNSFLKQLKYSFTVGNADKELIEFINSD 788 Query: 786 RMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPV 845 + + + +E L + + +V ++ P Sbjct: 789 DIEDLEVIKRKISKVQIDKEKLQESLNYKGNIKNYA---------SVSATRYMKYLKCPR 839 Query: 846 RAFFQMRLQVNFRTEDS------------------EIPDTE-------PFILEGLSRYQI 880 R + + L +N + E+ D E + + Sbjct: 840 RFYLESVLNINGKDYIEKENKHDIAEFLAEDTAKMEVEDIEQKTEYKLSQSISASTIGTA 899 Query: 881 NQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQP--- 937 ++ L + + + + + + +++ + + Sbjct: 900 VHSIIENLNNEVSIDE-----KDIIKAAAEKYELNYVDGIENKLKHYVEGYKLLEKEKSS 954 Query: 938 -------GQSMEIDLACNGVQ---ITGWLPQVQ---PDGLLRWRPSLLSV---------A 975 ++ L+ + I+G++ +++ DG + Sbjct: 955 YGSLVSKFNELDYSLSQMEHRKTSISGFIDRLEIFQKDGKYTAVITDYKTNFIYGNRKIK 1014 Query: 976 QGMQLWLEHLVYCASGGNGESRLFLRKDGEWRF 1008 + + ++ + K E Sbjct: 1015 ELTAAYELQMLLYGKAVKELLYVKGFKVEEIIL 1047 >UniRef50_C8NLR2 Helicase n=5 Tax=Corynebacterium RepID=C8NLR2_COREF Length = 1024 Score = 152 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 105/883 (11%), Positives = 207/883 (23%), Gaps = 137/883 (15%) Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 + G A + F+ P L G P ++ A + L ++ +I Sbjct: 157 QREGLRMVGFARQLRDFLLRAVERGVGPDDL----VRYGQQYNRPAWVSAGEFLREYQQI 212 Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV- 295 L + + T R +D + + +E + + + Sbjct: 213 MRLAGSHSYSASELVTGALACGDPRTTYRGVFVDDAQHLDPKSAELITRFIPAAELAVIA 272 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 G+P + + G + L D E+++ + Sbjct: 273 GDPEQSVFHFRGANP-DFLLDFEANRSIHLGEGRRT------------------------ 307 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 I+ V + ++L D + D + DI V+V Sbjct: 308 ----------------PLISIAVTETASAHNDLLADTVRRAHLLD-GVDWSDIAVIVRSA 350 Query: 416 DSYSPFIQAVFGSAPADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 +P +P I ++ A I L Sbjct: 351 GMIAPV-----RRVLLAAGVPVHISPTDVVLSEQRIVAAMILGLRAL------------- 392 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 E L L G G D +R L G R + Sbjct: 393 ------------TEELTPLELEDLLLGPIGGADPVTLRRLLRGLRQAEMRADGHRRAIEV 440 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV--CR 592 + +L + + EL+ + S+L G + E L Sbjct: 441 LRGLLNTDADEELLAF--LTDRELELLERVRSVLRAGREAMAGGSTEEILWAVWEATGLS 498 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEG-LGAQYGDAVPLSLLRDEL--AQRLDQER 649 L+A L + A+ + + + + R Sbjct: 499 SHLSAVSLRGGAAGSQADRDLDAIMALFDAAGDYVERYPTAGIRSFIVHISEQELPTGVR 558 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR--- 706 + V + T ++ V + + +G +P + D Sbjct: 559 ERRGVSPEAVTVTTAHATTGREWRHVIVAEVQEGSWPSLGETGTLLGQEELIDLLDENID 618 Query: 707 ---------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 R ++R LF A A +L ++ + D R PS ++EL + Sbjct: 619 PDTIISRSVDRLAEERRLFHVATSRACDQLLVTAVNTPDSD-EVREPSRFLEELAEAHRV 677 Query: 758 SHYLPGDEALNCDESEARVKAHL------------TCLHTRMPFDPQNYQPGERQSYARE 805 + L + + A Sbjct: 678 EITHIEGPGETPLAEPEVLGHRLLSVPALVAELRRVVTDPGELGSRRRQAARQLNRLAGA 737 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPET---VPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 +P A +PE + ++ P+RA Sbjct: 738 GIPGADPDTWLALREPSTTAELIPEGRVWLSPSRIEALMNCPLRASLDRL---------- 787 Query: 863 EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR---FRAAGDLPYGAFGEIFWET 919 D+E + R + A+ D ER E + Sbjct: 788 ---DSEDETPIAMLRGTLVHAFAEAVARGADPERAGEMVTEAYMDLANVPSWSRETTEQD 844 Query: 920 QCQEMQQLADRVI--ACRQPGQSMEIDLACN---GVQITGWLPQVQPDGLLRWRPSLLSV 974 + + + + E+++ V I G + +++ + L Sbjct: 845 FRRTITRTHTWLQTSRVTFDLVGTEMEVEVGISTEVGIRGRMDRLERNHAGELVIVDLKT 904 Query: 975 AQ---GMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAE 1014 + + EH + + E P E Sbjct: 905 GRQAAVQKDMGEHAQLASYQLALSRGVLHGDRVEDPAPGETPE 947 >UniRef50_UPI0001C4301D ATP-dependent nuclease subunit A n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4301D Length = 1135 Score = 152 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 105/971 (10%), Positives = 232/971 (23%), Gaps = 216/971 (22%) Query: 143 PDWLAQWETGHLVEGLGEAQAWQ---APLWKALVEYTHQLGQPR----------WHRANL 189 P+ W G + + + WQ L++ E+ L + L Sbjct: 261 PNEYMDWLIGVMPKRTDKK--WQEAIPALFQLFEEHWKPLKDDWKAVGGEVEIDEAASLL 318 Query: 190 YQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWG 249 RFI+ L + S L + L+ Sbjct: 319 LGRFIDLLCDFHLAYKREKELRGVVDFSDLQQKAVSLLE--------------------- 357 Query: 250 DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD 309 + + R ++ + E ++ N VG+ + + G + Sbjct: 358 ---NKEIQEACQKQFRHMLVDEFQDTNRLQLEMLERI-NPSYRFIVGDTKQSIYRFRGAN 413 Query: 310 YI--YLLSDLESSQE-----------------LDAFVDVTPDNLLHNIQSDILELENRAV 350 L QE +D + + +I + A+ Sbjct: 414 VRLMNELEQDAVEQENAEAIEMNINYRTCKPIIDGVNALFQSAMTDHITESY-QTRYAAL 472 Query: 351 AGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREV---EVLHDRLLAMLEEDPTL---- 403 + E L E E L R+ M+ Sbjct: 473 SANREAEQPDQKQMELLLLNKEE--------TDEEAGSYEALAHRINEMITSQQPRVFKG 524 Query: 404 ------TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 +D+ V++ A + + +PY + + F++L Sbjct: 525 ESWQAPAFKDMAVLIPARTDLLK-----LERAFSKQNIPYTVYGGIGFYERQEIIDFLTL 579 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L + F VL+LL P++ + ++ +++ + L Sbjct: 580 LRWMNRPFEDVYVLSLLRSPLIGLT-MNDFVTIAKQKEATQSFADYLYQLSESMPQTGLA 638 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 + + L L + S G + + L+ L I G Sbjct: 639 DSSDLPAQQILDAALKLKEWLLNYVPFS----IKGSPGETFDRMIKETGLVHSLLIQSNG 694 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 L + + +E+ + + ++ + +E+ I + Sbjct: 695 LQKVKNVEKLIQMI-------------EQSHLRSLEEIIHFIDERMALNDKEGEAEMER- 740 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY------------ 685 VNI T+ + + F +V L + V Sbjct: 741 ----------------TEGDAVNIMTIHASKGLEFPIVYLPQLERSVQGDKGSVRFDAKL 784 Query: 686 ----------------PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 P++L GF+L+ + ++ + LF A A+ L + Sbjct: 785 GIVWSLEEETDNLEARPKKLVTPGFELVKEAAGL---ESEEESKRLFYVAATRAKDYLVM 841 Query: 730 SYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 G + + + + + + L + Sbjct: 842 IGNGDGAKK-------SWLHLIEEA------RDCGPLEDYITVVNEISEQLPHHAENHLY 888 Query: 790 DPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 + Y + + + F P + Sbjct: 889 KGTELAAKKEVLY----------------------------PLSVSEIMTFIHQPEEYYE 920 Query: 850 QMRLQVNFRTEDSEIPDTEP----FILEGLSRYQINQQLLNALVEQDDAERL--FRRFRA 903 + L VN D + ++ + + A+ Sbjct: 921 KYVLGVNESRRLRSDADADQETRVQQVDPAVVGTLVHRACELRDYGFGAQEAVTEAMNYV 980 Query: 904 AGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL--ACNGVQITGWLPQVQP 961 + + + + M+ ++ E G ++ G + +V Sbjct: 981 DELNDTASVKVSYEQEVSELMETYSEAQQTELGTPVENEWSFATEIAGAEVIGEIDKV-V 1039 Query: 962 DGLLRWRPSLLSVAQGM------------QLWLEHLVYCASGGNGESR--LFLRKDGEWR 1007 + + QL+L + Y G+ S L++ +D E Sbjct: 1040 ERDGCLHIIDFKTNRIKRSGSEWLAVYDVQLYLYKMAYEQETGHTISTMSLYVLRDKEKP 1099 Query: 1008 FPPLAAEQALH 1018 + E+ Sbjct: 1100 LHTIHVEEEKE 1110 >UniRef50_Q3AA35 ATP-dependent helicase/nuclease subunit A n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=ADDA_CARHZ Length = 1167 Score = 152 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 89/881 (10%), Positives = 202/881 (22%), Gaps = 188/881 (21%) Query: 246 YYWG-DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASW 303 +W DI +L + ++ + E + + VG+ + + Sbjct: 360 EHWALDILKSGVYRELREKYVEILVDEYQDINGLQEEILTYVSRDGQNLFMVGDVKQSIY 419 Query: 304 GKLGRDYIYLL---SDLESSQELDAFVDVTPDNLLHNIQS-------------------- 340 L D ++++ ++ + + Sbjct: 420 RFRWARPEIFLKKYEDFTDEKKIELSLNFRSREEIIATVNFIFKQIMKKRVAELSYDEKA 479 Query: 341 ------DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 D L N IE D +P + H RE ++ ++L Sbjct: 480 FLKKGADYLPNANCFAELHLIEGKPEEDINSNGEPEEDLTAVH------REARLVAAKIL 533 Query: 395 AMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 + EE L RDI+ + ++ +P + Sbjct: 534 KLKEEGFKVFDRETKEFRPLQYRDIV----ILSRSLSNSSNIWQEELTRAGIPVYVEGAG 589 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 + + + S L + D+ + A+L PV L Q E Sbjct: 590 SFLNSKEILLMTSFLKVIDNPCQDVPLAAVLCSPVAGL-------TYEELWQVRKEYPEG 642 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 D + L + Sbjct: 643 LLYDALKNKSLGKDELSVKS---------------------------------------- 662 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 L L +++ Q E + R + + + Sbjct: 663 -QKFLELLVEFQKLSRQISLAELVNEIYRKTNLPEIFGAYPGGEVRQANLKLLHDLAVDF 721 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQ----RFLAGPVNICTLMPMRSIPFKVVCLLG 679 G + L+Q + E S V + ++ + + F VV ++G Sbjct: 722 AEINGGG---IYNFLTFLSQAAESEDFSPAKLIGEADDVVRVMSVHKSKGLEFPVVFVVG 778 Query: 680 MNDGV---------------------YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 + P + +R R ++ + Sbjct: 779 LGKRFKFDYSNTVFLHSDLGFGPKFFDPEKRIRRHSIASQILSERMRRETLAEEMRILYV 838 Query: 719 ALISAQQKLYISYIGRS------------------IQDNSERFPSVLVQELIDYIGQSHY 760 AL A++KL + ++ + D + + + Sbjct: 839 ALTRAREKLILVGTVKNLAKKMAGWQSQTEALKDTLSDGQIARAGNFLDWIGPVV---FR 895 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF 820 D + + +P + + +AG + Sbjct: 896 EGSDLPDCLKVEVHPQQEKIEGEQWELPEVLRVKLLTKTPFTEETDYTGQFRAGLEF-NY 954 Query: 821 VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQI 880 LP + + L+ ++ V ++ E+ + +G + Sbjct: 955 PGLKIAKLPAKMSVSDLKEVFS---------TDDVISLEDEDEVFLPGVYFEDGAMLGIV 1005 Query: 881 NQQLLNAL-----VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ-QLADRVIAC 934 + L + + + A G LP + + + + L R++ Sbjct: 1006 YHEFLRRIDFQGDLSASGLKAQGETLVAEGVLPPESREMLDFTKIARIFATPLGQRILRA 1065 Query: 935 RQPGQSMEIDLAC-------------NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL- 980 R+ L + + G + + + + + Sbjct: 1066 REIYPEFPFTLGVKAGEIYPEATGFSEKILVRGVIDLLALEEDGFF-IVDWKTDRVTGDI 1124 Query: 981 -------WLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAE 1014 + L A + + K+ F L E Sbjct: 1125 LNERLKEYAGQLNLYARAVEEITGKKV-KEKYLYFINLEKE 1164 >UniRef50_B3WEJ1 ATP-dependent helicase/nuclease subunit A n=8 Tax=Lactobacillus RepID=ADDA_LACCB Length = 1234 Score = 152 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 94/1010 (9%), Positives = 220/1010 (21%), Gaps = 217/1010 (21%) Query: 147 AQWET-GHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPP 205 A W ++ + A + + T Q A ++ + L A Sbjct: 282 AAWSRISKGLDDADKDTKNAAKDLRDAAKKTWQNKLAPT-FALAAEQIGDLLREAQPL-- 338 Query: 206 GLPSRVFICGISALPPVYLQALQAL-GKHIEIHLLFTNPCRYYWGDIKDPAY-------L 257 ++ L V L+ AL + H+ + + I Sbjct: 339 ----------VATLANVALKFEDALTAEKAARHVQDYSDIAHNALRILQQKDPQTGAPIA 388 Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFN--SDGEQDVGNPLLASWGKLGRDYIYLLS 315 ++ + + VG+ + +G D + Sbjct: 389 DNYRASFDEVMVDEYQDISPLQEALLAAVSTTTPGDRFMVGDVKQSIYGFRLADPQLFIH 448 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---------------EEFSR 360 ++ Q+ P+ ++ + + +N I + Sbjct: 449 KYQTFQDAP-TDPAAPERII--LAENFRSTKNVLAFTNLIFSQIMDPEVGDLSYDNAAAL 505 Query: 361 SDNKRPLDPLDSSITFHVCH--------SPQREV-----------------EVLHDRLLA 395 ++ + S E+ +++ + Sbjct: 506 RYGALDYGDAHPAVKVLLYSKATSDEDSSDASELPGDADDNEPVDIATGQTQLVLAEIQR 565 Query: 396 ML------------EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 ++ +E + RDI ++ S + + A +P ++D + Sbjct: 566 LINDPDAQLWDRQAQEYRRIHYRDITLLTRQTSQNS-----LIQTQFAAAGVPLFVADTK 620 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 L ++LL + D++ ++A+L P++ Sbjct: 621 NFFKTTELMVMLALLKVIDNQKQDIPLVAVLRSPIVGLS--------------------- 659 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 L + L + L + + L Sbjct: 660 ---------------------ADQLALIRLAAKQVPYYDAVTAFLQAEPKTPLAQRTHDM 698 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 L QL+ +R + + + +D ++ + Q Sbjct: 699 LTHFFNQLSHFRDLARENDLVTLLWAIYQDTGFLDYVGGTPGGSQRQANLQALIDRARTY 758 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPVNICTLMPMRSIPFKVVCLLGMN 681 + + ++ + + V + T+ + + F VV L+ N Sbjct: 759 EAGGFKGLFAFIHFITLMQKQDQDLAMPAQVDPDNDAVKLMTIHKSKGLEFPVVFLMQAN 818 Query: 682 D---------------------GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + P ++ L AL Sbjct: 819 KHFNMRDQTGTAILTKQGIGIKWLDPETRVEYELPQYQAAKAARQNQTLAEEMRLLYVAL 878 Query: 721 ISAQQKLYISYIGRSI----------------QDNSERFPSV--------LVQELIDYIG 756 AQQ+LY+ S + R + + + + Sbjct: 879 TRAQQRLYVVGATMSGNQLTSADKTVEKWAAAAEGEARVLAPQVRSGATSYLDWIGPALI 938 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 + G + + T P P + + + ++ KA Sbjct: 939 RHPQARGLAETTIKPALVGDETEFTIEIDVNPQVTPTATPEKVSDDSGTMVDLSAWFKKA 998 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF---QMRLQVNFRTEDSEIPDTE---PF 870 + + ++R + P L D P P Sbjct: 999 YPFQAATTTTGFQS---VSEIKRAFDDPDTIDLVNADRFLGPKPPMRDLTAPAFLTETPS 1055 Query: 871 ILEGLSRYQINQQLLNAL-----VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 + + LL + + L + + I + + Sbjct: 1056 GISPAAIGTATHLLLQLVDLAKPITMASLRALRDQLTTKQVIAVDVAKHIDLTALIRFFE 1115 Query: 926 QLADRVIACRQPGQSMEIDL----------------ACNGVQITGWLPQVQPDGLLRWRP 969 R++ + E+ V I G + D Sbjct: 1116 TDLGRLLLAKPQQVHREVPFSMLLPADQVFEALADDPGEDVLIHGIIDGYVSDEQG-VTL 1174 Query: 970 SLLSVAQ------GMQLWLEHLVYCASGGNGE-------SRLFLRKDGEW 1006 + + L A L + G Sbjct: 1175 FDYKTDHNPNTAVLVDRYRGQLNLYAQALQDLQPKPVLHRYLVFLRTGTV 1224 >UniRef50_A1VQ25 UvrD/REP helicase n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VQ25_POLNA Length = 1141 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 87/802 (10%), Positives = 195/802 (24%), Gaps = 147/802 (18%) Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 + + L ++ + D L R + ++ + Sbjct: 385 YETYERLMTAKQLIDFGDLVAQPVRLVEADAEVRNALRARHKHVLVDEYQDVNRSSVRLL 444 Query: 284 GQL-FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDI 342 + + VG+ + + G + F P + + + Sbjct: 445 KAIVGDGRDLWVVGDARQSIYRFRGASATNM----------AQFTLDFPGAQVDQLGINY 494 Query: 343 LELENRAVAGVNIEEFSRSDN-------KRPLDPLDSSITFHVCHSPQREVEVLHDRLLA 395 + ++ K + F V + E+ + Sbjct: 495 RSRQEVIDVFTAFSGTMKASTGALPLHLKASRGASGVTPDFRVVSTTNDEISAIAA--AI 552 Query: 396 MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 + D R+ ++ A S R +P + P ++ + Sbjct: 553 QAQRDAGTAYREQALLCASNARLSEI-----AEGLEARGIPVLHLG--SLFERPEIKDLL 605 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEE-GLRYLRQWVNESGIRWGIDDDNVREL 514 +LLS+ + + V ++ A + E L+ + Q + D Sbjct: 606 ALLSMLNDPYA---------VGLVRASTMPSYELPLQDIAQIIERLRESKVAALDWRLAG 656 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 P T L R+ + + P +++ V L L + Sbjct: 657 NWPPELAGTSNATLARV---------AALFDGMSPTGNPWTILSTWVIDRLGLAKVLYLA 707 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 ++ + L W + + L Sbjct: 708 DDAQSRMKGLALWQ---------------------------FLNFCRQQPSGAGAPCTRL 740 Query: 635 SLLRDELAQRLDQERISQRFLA----GPVNICTLMPMRSIPFKVVCLLGMN------DGV 684 L + + V + T+ + + F V + GM + + Sbjct: 741 LDRIRRLVLLSEDRGLRHLPGVVDGIDAVRLMTIHASKGLEFHTVHIPGMVTSGLPRNNM 800 Query: 685 YPRQLAPLGFDLMSQ---KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 PR + P G S + +++ LF AL A+ +L++ Y D Sbjct: 801 APRCVPPDGLIHGSDGITGLEAVKSGHEEEEECLFFVALSRARDRLFL-YASSVQSDGRA 859 Query: 742 RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQS 801 R PS + + + S P ++ R KA L + P Sbjct: 860 RNPSKFLTSIRHLLIHSPNPPQ------RSAKLRAKACLQVAWAQKPVWTD--------- 904 Query: 802 YAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 + F P R F+ L++ R + Sbjct: 905 ---------------------------------SQVNLFARCPRRFFYTHVLKLGGRRTE 931 Query: 862 SEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC 921 + + + + ++ E GA + E Sbjct: 932 TAFMKMHNVVGDVFDWLKTTHEM------TVPTEAELGARFDQAWQVKGAIDHGYAEDYR 985 Query: 922 QEMQQLADRVIACR-----QPGQSMEIDLACNGVQIT-GWLPQVQPDGLLRWRPSLLSVA 975 + ++L D +I R P + + + + + + ++ R Sbjct: 986 RIARRLVDYLIETRSRGVLAPATPISLGWVEGEILVRPDSVARGDKGQIVVRRVKTGKPR 1045 Query: 976 QGMQLWLEHLVYCASGGNGESR 997 +E+ + + Sbjct: 1046 SNAFDDIEYTLLHLATMQTYGG 1067 >UniRef50_B2I385 Superfamily I DNA and RNA helicase n=17 Tax=Acinetobacter RepID=B2I385_ACIBC Length = 659 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 52/522 (9%), Positives = 131/522 (25%), Gaps = 98/522 (18%) Query: 265 RRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELD 324 + ++ + L VG+ + +G G D+ + Sbjct: 216 QALLVDEMQDTNPLQWALLQPLIGKVKLFCVGDDAQSIYGFRGADFEN----------IH 265 Query: 325 AFVDVTPDNLLHNIQSDILELENRAVAGV---NIEEFSRSDNKRPLDPLDSSITFHVCHS 381 +F + PD ++H + + + + H+ + Sbjct: 266 SFKERIPDAVIHTLDLNYRSTQEILDLSNWLLAHSPIDYQKQLQAHRGKGQKPQLHLFGN 325 Query: 382 PQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD 441 E + L+ ++ D +V+V + A +PY Sbjct: 326 EFEEANWIAQDLIERHQQ--GANWYDHMVLVRS-----GYSARYLEGAFIAAEIPYRFIG 378 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 ++ +SLL + + + Sbjct: 379 GVKLLESAHVKDVLSLLRIVSNPQDDLAWMRF--------------------------LT 412 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 + GI D +L R+ + Q++L + L + Sbjct: 413 LWDGIGDVGASKLAQELMSISEVEERCERLERHGKVP-----LQAILILKQLDVLQQHVE 467 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 + L L+ E+ + + D + + + Sbjct: 468 ASIGLALDALS------------EQLEQNYKTKDWSRRARDFDLVKQLARKHASLGEFLE 515 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 + + + + I + V + T+ + KV + ++ Sbjct: 516 -----------------EYVLEPISISEIEKAGDDDLVTLITIHSAKGAEQKVCYVPHVS 558 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI------SYIGRS 735 YP A FD +++R + AL A+ +L + ++ + Sbjct: 559 PNQYPYARAQGDFD------------EVEEERRVLYVALTRAENELILTKQNLNTWSQDT 606 Query: 736 IQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 + + S + +L ++ Q+ + + Sbjct: 607 YDEQGRKIESYFLNDLPAHLVQAKIHRQVPQPFAKKQWNTSR 648 >UniRef50_C6JEU5 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEU5_9FIRM Length = 1269 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 115/1082 (10%), Positives = 250/1082 (23%), Gaps = 204/1082 (18%) Query: 69 IWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLS 128 + + A + + L+ L +L E+ D+ L S R LS Sbjct: 234 ARRICSEPDGPYLYDEALSSDLL---LIRSLQELAEKRDYNGTAEILMKPSFAR----LS 286 Query: 129 SKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRAN 188 +K A D+ R L E +++ LG+ +Q+ K L+E + P Sbjct: 287 TKKAADVDEQKKQRVKDLRD-EEKGILKELGQR-YFQSA-EKELLEVIRYIRGPVEMLVE 343 Query: 189 LYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYW 248 L F E A L + ALQ L + + R Sbjct: 344 LTVGFKERFGEAKREKNIL----------DFTDMEHFALQILMTKEGEEIHMSQAARELS 393 Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG----QLFNSDGEQDVGNPLLASWG 304 + ++ + + VG+ + + Sbjct: 394 A-------------KYDEVLVDEYQDSNLVQELLTTAVSGWINQKKNIFMVGDVKQSIYR 440 Query: 305 KLGRDYIYLLSDL-------ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 + Q +D + + + I G + Sbjct: 441 FRLARPELFMEKYKSYSTEEAQEQRIDLHKNFRSREQVLESVNFIFRQIMGEDLGGITYD 500 Query: 358 FSRSDNKRPLDPLDSSITFHVCH------------------------SPQR--------- 384 + P S F + + Sbjct: 501 KDAALYPGASFPEGESEEFVKTEVLLVERDGEELSDVQDYEDAGASGNRREMENQTGQEL 560 Query: 385 EVEVLHDRLLAMLEED----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 E + R+ ++ ++ ++ DI++++ ++ F A + Sbjct: 561 EALAIAQRIKEIVGKEQIVDKEKKEYRSVEYGDIVILLRTAYGWA----ETFREVLASQG 616 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P + R S + ++ L + D+ ++ +L P++ T + L LR Sbjct: 617 IPVYCTSRTGYFSATEIVTVLNYLKVCDNPLQDIPLMGVLRSPIVG----CTSQELAELR 672 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 + + +L + + Sbjct: 673 IQY------------------PDGLLYESVSAYAGENEIPEKELDPDKLKSELLNSNLRT 714 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 L L L L R E L V ++ + Sbjct: 715 DEKNSLNIKLKGFLSLLEKVRNMATYTPVHELILYVLKETGYGDYARALPGGEQRFANLT 774 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG--PVNICTLMPMRSIPF 672 + Y ++L AG V I T+ + + F Sbjct: 775 MLVEKAMDYEKTSYRGLFNFVRYIEQLQAYQVDYGEVNLTGAGNTAVEIMTIHKSKGLEF 834 Query: 673 KVVCLLGMN----------------------DGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 VV + GM D + P + ++ + Sbjct: 835 PVVFVAGMGKQFNFQDMNAGLLLHPELGIGADAIIPEKRVIASSLNKQVIRRQLLKESLG 894 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ----------ELIDYIGQSHY 760 ++ + A+ A++KL ++ + S + + + Sbjct: 895 EELRVLYVAMTRAKEKLILTGTV-GKLEKQMMSLSRFLDEEEELLPLGTRMKAKNYWAFV 953 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF 820 LP L + D + + QAG E Sbjct: 954 LPALVRHRAMSELLWEYGILMKKQPGIYDDISEFVIKKITVRQMTEKAVLIQAGNQMQEE 1013 Query: 821 --VQPLPFTLPETVPLETLQRFWAH--PVRAFFQ-----MRLQVNFRTEDSEIPDTEPFI 871 + + V E +++ ++ P + + R+ E E Sbjct: 1014 YLKNWDENKVYDEVVKEEIEKRFSFVYPYKYLEDIPVKVSVSDLKKRSWHDESELEENIS 1073 Query: 872 LE------------------------GLSRYQINQQLLNAL-VEQDDAERLFRRFRAAGD 906 + G +R +++ L + D E R Sbjct: 1074 VSAEEQDEEQEAPVPAFMAEKQEEYKGAARGTAYHRVMECLDYAEADTEEQLRAQLKRLL 1133 Query: 907 LPYGAFGEIFWETQCQEMQQLAD----------RVIACRQPGQSMEID---------LAC 947 + + +++++ + + Q I Sbjct: 1134 ESQKMTEQEAECIRIRDIRRFVESGLGQRMKKAAMKKHLYREQPFVIQRNASMLDDGWKN 1193 Query: 948 NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL--VYCASGGNGESRLFLRKDGE 1005 V + G + + + + + L +Y + L Sbjct: 1194 ETVLVQGIIDAYFMEEEEIVLV-DYKTDRVRRGQEQKLINLYHVQLEDYARALERMTGKR 1252 Query: 1006 WR 1007 + Sbjct: 1253 VK 1254 >UniRef50_C6CTT6 Recombination helicase AddA n=2 Tax=Firmicutes RepID=C6CTT6_PAESJ Length = 1277 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 90/990 (9%), Positives = 205/990 (20%), Gaps = 210/990 (21%) Query: 156 EGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICG 215 + + QA + + + F L+ L V G Sbjct: 301 DDYDKTMQEQAKELRDQAKKLISSLADEL-FGRSAEEFAWELQELAPLMAALSELVIEFG 359 Query: 216 ISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELP 275 + L G L + + ++ + Sbjct: 360 QRYEAAKRSKGLLDFGDLEHYCLRILRAPESTPELTTPSPAATEYQRQFDEILLDEYQDT 419 Query: 276 LFRDSENAGQLFNSDG--EQDVGNPLLASWGKLGRD-------YIYLLSDLESSQELDAF 326 + N VG+ + + + Y + +D Sbjct: 420 NMVQEAIVSLIANPHAGNRFMVGDVKQSIYRFRLAEPNLFMSKYKNYGAPGGDGLRIDLA 479 Query: 327 VDVTPDNLLHNIQSDI---------------------------------LELENRAVAGV 353 + + + +D+ AV Sbjct: 480 RNFRSRLEVVDGVNDVFRAIMRETVAEMDYDKRAELVCGASYPEPDLPGRFAVELAVIDK 539 Query: 354 NIEEFSRSDNKRPLDPLDSSIT--------FHVCHSPQREVEVLHDRLLAMLEED----- 400 P D D S + Q E ++ ++ ++L+E Sbjct: 540 AGSSNEEDGAVSPADSDDESEQGAGPAAESAEELQTAQLEARLIARQIRSLLDEGFRVYD 599 Query: 401 ------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 + RDI++++ +++P I +P +E Sbjct: 600 GKKRESRPMEWRDIVILLRATQAWAPVII----EELQGAGIPAYAELSSGYFDATEVETI 655 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 +SLL + D+ + + L P+ Sbjct: 656 LSLLRVIDNPYQDIPLAGTLRSPIFGLN-------------------------------- 683 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 + L + +VL L EL L+ L +L+ W Sbjct: 684 -------------AEELALIRIGAMQDTYYDAVLQAAGDLLLPDELRRKLSLFLERLDRW 730 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 R Q + + R+ F + + + Sbjct: 731 RNDARQGSLADLIWSIYRETGYYDFAGGLPGGVQRQANLRALHDRARQYEATSFRGLFRF 790 Query: 635 SLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG--------- 683 + + + V I ++ + + F VV + G+ Sbjct: 791 LRFVERMRDSGGDLGTARALGEQENVVRIMSIHKSKGLEFPVVFVAGLGKNFNQQDLRSA 850 Query: 684 -------------VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 + P + +R ++ + AL ++K+++ Sbjct: 851 FLKHKQLGFGPKYIDPEKRVSYPTLPFLSIRRRMRMEMLAEEMRILYVALTRPKEKMFLV 910 Query: 731 YIGRSIQDNSERF-----------------PSVLVQELIDYIGQSHYLPGDEALNCDESE 773 R+ S + L + DE + E Sbjct: 911 GTVSDAAAKQRRWQSASDAKGYISDFRLSSASTFLDWLGPLAAAAFNQLPDETVPGHEDS 970 Query: 774 ARV------------------------KAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 + + Q Sbjct: 971 RLLQWRAGVVDAAMLGLEAAIGVEERTEEDQAREDRMQGVLSLAQLDQVEQDEELRNRLE 1030 Query: 810 ASQAGKAHSEFVQPLPFTLPETVPLETLQ----RFWAHPVRAFFQMR--------LQVNF 857 +A + T + + E ++ +P F + ++ Sbjct: 1031 WRYGYRASTLVAAKTSVTEMKRLHSEAVEMPEDSAALYPADTFSDRQQEDGKKSSGGGSY 1090 Query: 858 RTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFW 917 E L + ++ L+ L D + + + Sbjct: 1091 TFRLRRPRFMEEAALTAAEKGTVSHLLMQHLPLAGDVDVDRLGSILSDMVSRKLLTARQA 1150 Query: 918 ETQ-CQEMQQLAD-----RVIACRQPGQSMEI---------------DLACNGVQITGWL 956 ++ + D R++ + + + D+A V I G + Sbjct: 1151 DSIDLPAVAAFFDTEIGKRLVHAKWVRREVPFSCMFPAQRVYPGLAADMAGEPVLIQGVI 1210 Query: 957 PQVQPDGLLRWRPSLLSVAQGMQLWLEHLV 986 + D + E Sbjct: 1211 DCLFEDENGIVL-LDYKTDRIYMKQWEQAA 1239 >UniRef50_C1ZK16 ATP-dependent exonuclease V beta subunit, helicase and exonuclease domain-containing n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZK16_PLALI Length = 1226 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 107/1014 (10%), Positives = 243/1014 (23%), Gaps = 193/1014 (19%) Query: 130 KAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAW------QAPLWKALVEYTHQLGQPR 183 + ++ + P + + + ++Q A L+ L +G Sbjct: 225 RLSEFISRTSANSPKLDEKLKILRQIMEQLKSQQDSPEPGRLAELFAELSLQARVVGVKP 284 Query: 184 WH--RANLYQRFIETLESATTCPPGLPSRVFICGISALPPVY--LQALQALGK--HIEIH 237 H + ++ E L + + +P L L G+ Sbjct: 285 DHWGSPDDHELAKELFTQVRDDCKKLIETIQLAQTEFVPYAEKSLAWLSVAGESIRDYEL 344 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHS--------FEDRELPLFRDSENAGQLFNS 289 + + C + + L + R+ ++ + ++ + Sbjct: 345 IKKSRACVDFDDLLVLSRDLLRNDLTVRQALSRSIRVLMVDEFQDTDPVQADLVEMICGK 404 Query: 290 DG----EQDVGNPLLASWGKLGRD-------------------------------YIYLL 314 + VG+ + + G D ++ +L Sbjct: 405 ELTTGKLFLVGDQKQSIYRFRGADPLVFRSLKSKIPAAGQLPLTINFRSQPPILHFVNIL 464 Query: 315 -----------------SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV---- 353 + + ++ T +Q I A Sbjct: 465 FRRVMGADYEALEPSFADEKPELERIEFLWATTDVVENKAVQGSIPSTVPLAQGLADEQA 524 Query: 354 ---NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED---------- 400 E +N DS +RE + + R+L +L + Sbjct: 525 RDAADAESQDVENIDDDSRSDSGEKQTAPFLRRREADWIARRILELLADPTPRIREKSGP 584 Query: 401 -PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 T+ P DI ++ + + V+ A + Y ++ RA + + L Sbjct: 585 WRTIVPGDITILFRALTNL-----EVYEQALEAAGIDYYVAGGRAFFAQQEIYDLAHLCQ 639 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 D ++ LL P Sbjct: 640 FLDDPEDGFSLVGLLRSPFFC--------------------------------------- 660 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 + L L A Q + S V A L L R Sbjct: 661 ----FSDPLIHRLASRAGGITQSLFAEASVVSGLSPEETAQVQFAAQTLGSLVEQRDHWP 716 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 R + L + A + + + + + + A A ++ LR+ Sbjct: 717 LARIIRRALEL--TGYEAIVSQEFLGSRKLANVHKAI-ELARQFDLAGGSRAAFVTQLRE 773 Query: 640 EL-AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN-----DGVYPRQLAP-- 691 + + ++ + + V + ++ + + F VV + MN + + P Sbjct: 774 SIDQESREELAATHPESSSVVRLMSIHQSKGLEFPVVFVADMNRPRKTESLPPTLHPQLG 833 Query: 692 ---LGFDLMSQKPKR---------GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 + + ++ K + + ++ + L A A+ L +S + + Sbjct: 834 ALVTPSNPLGERQKHPVGQFIEIMEEAASLEEYQRLLYVAATRARDLLILSAGIKGFDEG 893 Query: 740 SERFPSVLVQELIDYIG--------QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 S + L + G E + + ++ H Sbjct: 894 KF---SPWMLVLKQVFHLETGLLRNDPWFASGHEDVKTPQEIPLIRTHHQPPQFIDHRVQ 950 Query: 792 QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQM 851 + L A + + L+ F Sbjct: 951 RQGVHKLSFPQVWNELELAESLPWPQLVADVQRGAEGRRRLSVSRLEEFQEQS-----SS 1005 Query: 852 RLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE---RLFRRFRAAGDLP 908 +L+ + E + ++ +L + E L R Sbjct: 1006 KLKSLVPAGELEAHSASLSRSDAELLGEMIHGVLERFEPRAAEESEKALLHRLWLWCQRQ 1065 Query: 909 YGAFGEIFWETQCQEMQ-----QLADRVIACRQPGQSMEIDLACN--------GVQITGW 955 G E Q ++ +L D + + + +E L +I G Sbjct: 1066 PAPPGGQILEQAQQWLKTFASTELIDELAMASELNRELEFSLDWKMTGEEPKRETEIYGL 1125 Query: 956 LPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFP 1009 + + D W ++ + L+ + + R P Sbjct: 1126 IDVLMKDSQDDWIILDYKTSRLAAGVTDELLLQPYRLQLGTYALAVQRLFGRLP 1179 >UniRef50_B1VFC4 Putative ATP-dependent DNA helicase II n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VFC4_CORU7 Length = 1188 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 116/884 (13%), Positives = 228/884 (25%), Gaps = 138/884 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIY 312 A L + + R +D +E Q F G+P + G D Sbjct: 268 RAQLDRWREKLRLILIDDAHNLDPAAAEFLEQFFTPETRVVLAGDPDQCVFHFRGAD-EE 326 Query: 313 LLSDLESSQE------------------LDAFVDVTPDN------LLHNIQSDILELENR 348 LLS + + ++A P + E E Sbjct: 327 LLSKYAADENHRVVLSGSQRFGAPTARAINALTGHLPHVDTRIPLRVAEGAEAAQEAEAT 386 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 A V + + I +S E + D L D + +D+ Sbjct: 387 AGELVAPDAGRAGATSGAGGERNQPIRVLRANSGTAERLHITDALRRAHVRD-GVAWQDM 445 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA-RQSHPVLEAFISLLSLPDSRFVS 467 V+V + +P A +P + P++ ++ L + Sbjct: 446 AVIVRSVGEIAPI-----RRALLTHGVPVRVDQTSIILAEQPLIRLLLTALEATYRPLEN 500 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 +V L++ V A + +R L + + ++ R + V E Q + Sbjct: 501 SEVRVLMESMVGGADPIM----VRRLERVLAQALARQRLQGKPVPENTAGLPFQSS--DA 554 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 L+ +L G A EW + G + L + L R + +E Sbjct: 555 LSTLLNGTASAEDAAEWTA--------GFNNRELQILQDMSDVLTAGREAQRAGQSVEMV 606 Query: 588 LPVCR-------DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 L + A ++ G + + +E Sbjct: 607 LWEIWKATGLDTRLQERALRGGTFGSQADQDLDSVMMLFDMAGDFVERHPNASIRTFCEE 666 Query: 641 LAQR-LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ 699 + + L + + V I + V + + +G +P G + Sbjct: 667 VRAQELPTGGRERGVASNAVEILPAHAAVGRQWHTVVVTRVQEGSWPAGPTVGGLFGQLE 726 Query: 700 KPKRGDR------------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 DR S ++R LFL A+ A + ++ I + +N PS Sbjct: 727 LVDLLDRGIEPGTRVSRVASAVHEERRLFLVAISRATRSTLVTCIDNASVENG--VPSRF 784 Query: 748 VQELIDY------IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQS 801 V+E+ D +G + ++ + + + L + Q P + S Sbjct: 785 VEEITDAPGAAVPLGTVDQIEQEDPVGQEATPGEPVQGELGLGLELGDSAQQGGPAVQAS 844 Query: 802 YAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQR---------------------- 839 A + + + + + P L + Sbjct: 845 PAEQLSSSDQLSPAEQLSALPRVLALEPLIAELRDVVTDPTQRHHRRVAAARNLAAMAEA 904 Query: 840 --FWAHPVRAF-----------FQMRLQVNFRTEDSEIPDTEPF------------ILEG 874 F +HPV + R V+ + D Sbjct: 905 GIFGSHPVDWWGMAEPTTMERVTDRRGGVSLSPSKLDNIDNCALKTFFDDNRGAQEETNP 964 Query: 875 LSRYQINQQLLNALVEQD----DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR 930 + + + A+V+QD DA+ R + E Q + L Sbjct: 965 MRVGTVVHAIAQAIVQQDLSLEDAQYAARTALKWAVVGPAFEVNAALERWEQGIANLHSW 1024 Query: 931 VIACRQPGQSMEIDLA------------CNGVQITGWLPQVQPDGLLRWRPSLLSVAQGM 978 + + E ++ V + G + + D R + Sbjct: 1025 ITETCTQTEGTEWEVEQQLDTTLGTLPTGEEVFLRGRIDLMATDADGRVVVYDFKTGKTP 1084 Query: 979 QLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQ 1022 + E G R + + + L + Sbjct: 1085 KTAAEAQASRQLGAYQFLVHVNRGKQPYGAHLIYPATSEGKLKK 1128 >UniRef50_B9ZQQ0 UvrD/REP helicase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZQQ0_9GAMM Length = 704 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 60/504 (11%), Positives = 130/504 (25%), Gaps = 64/504 (12%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 P + AKL R + ++ + + + VG+ + G L Sbjct: 224 PEWAAKLEERFTHIAVDEAQDTNRIQYAMLRLFSSHNNVIMVGDDDQCIYEWRGAAPSNL 283 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE-FSRSDNKRPL---DP 369 + + ++ + + A K P Sbjct: 284 -----------RTFRDETEAAIVRLERNYRSTPSIVSAAARHIACNQTRIEKSPYAEGRA 332 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + + + D ++P+ I ++ I V A Sbjct: 333 DGDPPDGQQHPDGVAMANAIAQDIREAI--DSGISPKRIAILYRVNK-----IARVLEPA 385 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 R +PY I+ P + + + L + S Sbjct: 386 LIARGIPYHIAQGIDVFQTPEAQLLMGAVRLVQNPQDSMA-------------------- 425 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L Q V G R D + + L++ A E + Sbjct: 426 ATKLAQLVKGLGERSLNDMIGYSVIHDLPILECRQHVKLSK-PAFAAAERLSQMIDGLAQ 484 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + L + L + + + + E + Sbjct: 485 WPPLYLAEWALDPEMGGFQDTLKELSKTADKPKTMYERRLT-----------------TI 527 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS 669 IE+ Q + S + + + L + V + T+ ++ Sbjct: 528 MSIEEAIQGRFGTSDQGKADAEYSRSEQWEIVQE-LALAAPDEEAEQDAVTVATVFRVKG 586 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 + + V + GM+DG+ P + + + + + +++R L A A+++L + Sbjct: 587 LEYHTVHIAGMSDGLMPMRRSSDKPPMFDEDEDEAAQ-NVEEERRLSYVAATRARERLVV 645 Query: 730 SYIGR--SIQDNSERFPSVLVQEL 751 + R D PS E+ Sbjct: 646 HHADRIHWGYDEDFFTPSGFADEM 669 >UniRef50_Q2S4M5 Probable ATP-dependent DNA helicase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S4M5_SALRD Length = 855 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 71/609 (11%), Positives = 150/609 (24%), Gaps = 84/609 (13%) Query: 232 KHIEIHLLFTNPCRYYWGDIKD-PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 + E + F + W + A+ ++ + + L Sbjct: 195 RRREGWVTFDDMLLEGWEALLRFDDLRARAQQAYEHVLIDEFQDISRVQYQMLDVLTEPH 254 Query: 291 G-EQDVGNPLLASWGKLGRDYIYLLS-----DLESSQELDAFVDVTPDNLLHNIQSDILE 344 VG+ + G + ++L + + D F P +L Sbjct: 255 RNYMAVGDDDQCIYEWRGANPSFILDFREEYEADEYLIRDTFRSQAPHTVL--------- 305 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 A A + + R + S H E + + + L+ TL Sbjct: 306 ----ANAVIAHNDHRREKHLNLTRGFGGSTQVHAADGADAEATHVAGAIESQLDTGRTLP 361 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 +++V+V DR LPY I ++ + L Sbjct: 362 --EMVVLVRQYAQ-----TPSLEQVFIDRDLPYRIVGNVPFYRRRPVQVLLRHLFWG--- 411 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 L + R R +L Sbjct: 412 ------------------------TLEATVRTAGWFDHRRNAQRYVDRFQKLMREPNRYV 447 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 L L A+ + + + L + L + Sbjct: 448 STDLITRLCREAVGDETSITDLLAA--SMGAMHDRTAERVERFLDTADQLVDRLDEPAHR 505 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 + + + E + +++I ++ + + + Sbjct: 506 TVDWLIKALDYEDYLRRYSAFEELADRRIRTARSLIDFAR-----GHPDVASVLRRIKE- 559 Query: 645 LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 + +R + A + I ++ + + VV + G NDG P + G Sbjct: 560 ISVDRPDRGAQADVLEIRSIHRAKGREWPVVFVPGCNDGTIPTSRDDSTMPPPDEDDSAG 619 Query: 705 D---------------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 +RR+++R LF AL AQ++L++SY + PS + Sbjct: 620 ASDDSGSEDSDTDDAPAARREEERRLFYVALTRAQEQLHLSY-------DRTEPPSPFLA 672 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 E + + + + Y + Sbjct: 673 EADAEHRLALCDRVRPVFHRPADDWAAADVAWLCIGAGALRLRRYLTTWWDPTEAQRRAL 732 Query: 810 ASQAGKAHS 818 A+ G+ + Sbjct: 733 AAHLGREEA 741 >UniRef50_C5CHI0 Exodeoxyribonuclease V n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CHI0_KOSOT Length = 991 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 91/815 (11%), Positives = 205/815 (25%), Gaps = 165/815 (20%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG--EQDVGNPLLASWGKLGRDYI 311 P K + R + ++ + + L + VG+ + + G D Sbjct: 252 PQLREKYVRRFKYILIDEFQDTDWLQKTIIDYLHEEERNFLLFVGDAKQSIYRFRGADVT 311 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD--- 368 + +A ++ ++ D++E +NR + + +++ S K D Sbjct: 312 VFNRTKAEFEIKNAHLE--TLSVNRRSHPDLVEFQNRLFSKIMLQDRSGKYYKSIYDTEV 369 Query: 369 --------PLDSSITFHVCHSPQREVEVLHDRLLAMLEED------------PTLTPRDI 408 DS + V + +V+ + +L E+ + P DI Sbjct: 370 SAIPYEQDSNDSRVRVLVSENSDD-SQVVAQYIKNLLSEEITFRNKDGSYSTRKIKPGDI 428 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 +++ + S + A + +PY +A P + ++ L + Sbjct: 429 AILLRKFVNVSRY-----EDALEENGIPYYTVGSKAFYDRPEIAGPLAWLDVIVDPLDDA 483 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 +L+ F T E L Sbjct: 484 AFARF----LLSPAFGATFEDL-------------------------------------- 501 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL 588 + ++L + L + P Sbjct: 502 -----FELKSKEKHISDAILKTTDE---------RFKPLRELFIKYSELKHVLSPSSVLQ 547 Query: 589 PVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQE 648 + L + ++ I E S ++ + + E Sbjct: 548 KFVDETEYLPKLASMKRGERAINNVKKMLEIAKELDRLGTSLRELSSNIKAFIDSSEETE 607 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVV-----CLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 + + V + T+ + + F VV G +DG G+ + ++PK+ Sbjct: 608 ATLETEESDSVKLLTVHKSKGLEFPVVIVADTFWKGKSDGSPYILTGEDGYIVSREQPKK 667 Query: 704 GDRSRRDD------------DRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 + ++ A A++ L +S G+ + S ++Q Sbjct: 668 ESDTIESQLHLEEKEKNLEEEKRTLYVAFSRAREMLVVSLNGKKATSDRP--WSQMLQGT 725 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 + ++ + E V+ + + F Q +S Sbjct: 726 LITGENQLCEDMEDLVEIVEPGEAVREEPESIEEKESFIIQWPDIEFIKSVDDRSYIKYI 785 Query: 812 QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI 871 L +F E SE + I Sbjct: 786 SPS-------------------------------------LLAEDFTIEISESEPGDILI 808 Query: 872 LEGLSRYQINQQLLNAL-VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ----- 925 + + +L A+ + +G +P F E + ++ Sbjct: 809 RKPRELGTLTHSVLEAVGIRGRTGRVTTLESLLSGGIPASVDRIRFSEEDYEIVRKILYK 868 Query: 926 ----QLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLS-------- 973 L + + ++ + + G + ++ WR Sbjct: 869 LIDHPLIKEIETSDEAMSEVQFQKKFDRYVLLGIVDKLYR-VNGNWRILDFKFAEFSQKS 927 Query: 974 -VAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWR 1007 Q+ + ++L KDGE R Sbjct: 928 FPKYEFQMKFYLYILKELLAPECAKLLFLKDGEVR 962 >UniRef50_A7VJ43 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VJ43_9CLOT Length = 1247 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 57/550 (10%), Positives = 140/550 (25%), Gaps = 108/550 (19%) Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLFNSDGE----QDVGNPLLASWGKLGRDYIYLL-- 314 R R ++ + F + + + VG+ + + L Sbjct: 393 ARRYREILIDEYQDSNFLQEDILNCVTGHGEDRKNMFMVGDIKQSIYRFRMARPDLFLNK 452 Query: 315 ------SDLESSQELDAFVDVTPDNLLHNIQSDILE---------LENRAVAGVNIEEFS 359 + Q++ + + + + I E ++ A ++I Sbjct: 453 YNTYSDREDAEDQKILLSNNFRSAGKVIDTINQIFEPLMSENLGGIDYDESAKLHIGRQD 512 Query: 360 RS-----------DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT------ 402 ++ N + E ++ D + +++ D Sbjct: 513 KNNMGYGSEILIVRNDCADSEKSQPEEIRSLTNVDIEARMIADEIYELVKGDKPLYIPDG 572 Query: 403 -------LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 ++ RDI V++ + + F A A+R +P + + + Sbjct: 573 DNGETRRVSYRDIAVLMRSVKKNA----KAFEEAFAERGIPLFVESESGYFDAIEISTLL 628 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 +L++ D+ + A+L P+ ++ Sbjct: 629 DMLAVIDNSHQDYALAAVLRSPL---------------------------------AGVK 655 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 + + + +Q V Y E +E L L L+ W+ Sbjct: 656 EQELAEIVGIYDRDFKDHEKNLARTASFYQKVCYYAEKP--DSEASEELRQFLRMLDSWK 713 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 E + +F+ ++ + + Sbjct: 714 ADKNYMSISELLHSILEQTGYYWFVGAMQSGKRRQANIDMLIQKADTYEDSSFRGLFNFL 773 Query: 636 LLRDEL--AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN------DGVYPR 687 D L E V + T+ + + F VV + G+ D + P Sbjct: 774 RYMDRLKTNDLDFAEASVLGDDDDSVVMMTMHKSKGLEFPVVFVSGLANRFSNLDALSPV 833 Query: 688 QLAPLGFDLMSQKPKRGD----------------RSRRDDDRYLFLEALISAQQKLYISY 731 + + ++ + ++ + AL A++KLY++ Sbjct: 834 TVNADSYLAGYAIDRKNRAKKKTFARAAMLSVMNAEKLAEEIRILYVALSRAKEKLYMTA 893 Query: 732 IGRSIQDNSE 741 + Sbjct: 894 AVKDPGAEKA 903 >UniRef50_B6R280 Double-strand break repair protein AddB n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R280_9RHOB Length = 1040 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 134/1026 (13%), Positives = 260/1026 (25%), Gaps = 164/1026 (15%) Query: 30 FEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMFVR---VLPEIPKESAF 86 I V + A+ L L + G A LP +L A Sbjct: 42 LADVTIYVPTRRAARTLPDVLRKALGAKAA---LLPKILPLGDVDEEEHILKGHGDGEAL 98 Query: 87 NKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLF--------QLSSKAADLFDQY 138 + + + +L+ L R L D L+ L D+ Sbjct: 99 PPAMSTMERKLAMTRLVWAWKGQLRRQILQLKEDDPARVPASSADAAWLAGNLLTLMDE- 157 Query: 139 LVYRPDWLAQWETGHLVEGLGEAQAWQAPL-WKALVEYTHQLGQPRWHRANLYQRFIETL 197 V + A W + A+ W+ L + +V + +R + Sbjct: 158 -VQTEE--ASWAELGSLVPEDHAEYWKITLEFLKIVTDLWPEHLKAIGMMDPKERRSALI 214 Query: 198 ESATTCPPGLPSR--VFICGISALPPVYLQALQALGKHIEIHLLFTNPCR----YYWGDI 251 + P R V + G + P + ++A+ L+ R W + Sbjct: 215 RAEAARLRTTPPRGPVIVAGATGSFPATAELMKAVLSLENGALVLPALDRGMDAESWEAL 274 Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYI 311 P+ + G+P Sbjct: 275 GSPSEPQR----------------------------------VPGHP--------QYSLR 292 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE-NRAVAGVNIEEFSRSDNKRPLDPL 370 LL L +E D P++ ++ +I+ A + F S+ + Sbjct: 293 QLLLALGVKRE-DVTQLGAPESEALRLRCEIVNEALRPAETTEEWQNFFTSELAEHRETA 351 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 + + E + L +E T ++ D + S Sbjct: 352 FAGTQLITARNEAEEALSIALLLREAVEAGKTT-----ALISPDRT-----LARRVASEL 401 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 + + R + P + I L ++LALL P L Sbjct: 402 TRWGIIVDDTAGRPLEQTPPMVLAILTAKLALQGLDPVNLLALLKHP------------L 449 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 +L E + V P G R + ++ + + Sbjct: 450 AFLGMKAKEVRSAARALERGVLRGPHPRPGLSGLREAVEAAHDQAMEKADRPVARWRKLV 509 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 +E I L+ L L L + E P+E+ + D + + + + Sbjct: 510 EEDWDAINTLLDRLEQALGPLEALLQN-PNEIPVEDIIKTHVDAVLLLGADENGSTEELF 568 Query: 611 LIEQ---QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PVNICTLMP 666 E + + + G VP + + + R A +++ M Sbjct: 569 SGENGKALAETLTSLLEADAAGLCVPANEWPGVFGALITGGAVRSRTPADPRIHLLGPME 628 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 R + +V L G+N+G +P++ + K + G +R + SA Sbjct: 629 ARLQRYDLVVLGGLNEGTWPQRTRNDPWLNRPMKGQIGLDPP---ERKIG----TSAHDF 681 Query: 727 LY------ISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 L+ + D S S +Q ++ GQS A V Sbjct: 682 LWNLGAPEVVLSRSERVDGSPTVASRWLQRIVTLAGQSVEQQMRAKGKRYTEMAHVLDRS 741 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 A +P P + + ++ Sbjct: 742 ET-----------------------------PVRPAKRPEPKPPVEARPVQLSVTAIENL 772 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD---AERL 897 P + + L+++ P + I L +E D E+ Sbjct: 773 IRDPYLIYARHVLKLDEVDPIGGEP-------GAADKGNIIHDALANFLEDWDGPFDEKA 825 Query: 898 FRRFRAAG------DLPYGAFGEIFWETQCQEMQQLADR--------VIACRQPGQSMEI 943 R G + A ++W + ++ + +E+ Sbjct: 826 VRALLTEGGRLFRPLDAFPAIRALWWPRFERIAEEFVAYEGEVAPKIYDRFLEEYGKVEM 885 Query: 944 DLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKD 1003 +TG ++ R Q + + S +R+ Sbjct: 886 PRPERNFTLTGRADRIDQMKDNTLRVVDYKTGQPPSA--KQVEALLSPQLPLEVAMIRRK 943 Query: 1004 GEWRFP 1009 G P Sbjct: 944 GFEDLP 949 >UniRef50_B5Y6N2 ATP-dependent DNA helicase PcrA n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y6N2_COPPD Length = 696 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 52/539 (9%), Positives = 140/539 (25%), Gaps = 88/539 (16%) Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-----GEQDVGNPLLAS 302 P + ++ + F + + N VG+P + Sbjct: 238 QRMEDRPELREMIAGLFDLVMVDEFQDTNFAQYQMLLYMTNPHYSGMNNVTIVGDPDQSI 297 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 +G +Y + ++ F+D L + I++ + + + Sbjct: 298 YGFRAAEYYNIKRFIDDYNPEVVFLD-----LNYRSNRTIVDSASALI--NDSPSALFER 350 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 + + + + + + + +I V++ + Sbjct: 351 KLESIKGAGNKLILRRPFDDADAAITAAFEVQRLHKM--GIPYEEIAVLMRTRA-----L 403 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 A A R + Y I + ++ ++ L L + + + + + Sbjct: 404 TARVEREFATRNIQYHIIGGVPFFARREIKDILAYLRLSRNAMDRVSLKRI----LTMKK 459 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 L L + E+ +L Sbjct: 460 RGFGTASLEKLFNFAEENK---------------------------LTLLEAMKAAVESL 492 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 ++ + D L +L+ + + E ++ L F Sbjct: 493 LFKKLSMNDYLES--------LYTLIQTIQEIAEPSQAIYLVME-----QENLLDHFRSI 539 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNIC 662 +++E + + +I+ + + A + V I Sbjct: 540 SKSEEEYIERTENVKQLISIAEESA-----DMDDFLQRSALGTRENNGGVE----GVAIS 590 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 T+ ++ + F+ V L + DG +P L+ + ++++R L A+ Sbjct: 591 TVHGVKGLEFQAVILYYVTDGFFPHSLSVTT-------------AEKEEERRLLYVAMTR 637 Query: 723 AQQKLYISYIGRSIQDN---SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 A++ L + N PS ++ + + + + + Sbjct: 638 AKEHLIFYVPYKQPWGNGFEQMARPSPFLRSIPKELWDGKPNEIESLYAPYSPQQKWSE 696 >UniRef50_Q97JY0 ATP-dependent DNA helicase, uvrD-like n=1 Tax=Clostridium acetobutylicum RepID=Q97JY0_CLOAB Length = 609 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 67/641 (10%), Positives = 167/641 (26%), Gaps = 115/641 (17%) Query: 123 KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPL------WKALVEYT 176 K F L L + + + D L T V L + + +L Sbjct: 28 KTFSLVQHIIHLVNDLNIPQSDILLISFTRAAVNNLKKKLEENFIYDVSVHTFHSLSAKI 87 Query: 177 HQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA---------LPPVYLQA- 226 + + + E + + G P+ Sbjct: 88 LSEYGLNVSKTLPVWKIQKEFEKINSNVET-EKILSWIGFQKNHGKTPKDKFYPIETDYT 146 Query: 227 ---LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 L+A+ K E N + I L K + + ++ + + E Sbjct: 147 ETELRAMFKLYENLKEKENCYDFEDWIILALEKLKKHPRKWKYVMADEVQDSNDLNIEMI 206 Query: 284 GQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL 343 + + VG+ A + G + L+ F + ++ + Sbjct: 207 KLISKN--LICVGDVRQAIYSFRGSSPQFFLN----------FDKEFNGAKILHLDINYR 254 Query: 344 ELENRAVAGVNIEEFSRSDNKR-----PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 +N + D K + I + + E E + + + + Sbjct: 255 SKKNIVDKSNKFIKPYFKDYKYYSDSIANFKDNGEIKYFSFVNKLEESEKISNLIKEKIT 314 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 + P +I V+ D + +PY I + + + + L Sbjct: 315 KGE--DPNNIAVLYRLNDD-----SSYLECVLRRDKIPYYIENDSSFFKRKEIAGIMGYL 367 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 L + L + ++ + ++ Sbjct: 368 RLIQNSKDDGAFLDVWNLRNIPLKYMSGT------------------------------- 396 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + + +++ + ++ D + + +L + + Sbjct: 397 ---------ILSDIRKQSVKENKSYFEIFKKMDFNKMFQIRSRNDFIKSIEKLKH-KNKV 446 Query: 579 AQERPLEEWLPVC-RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 + ++ +++ + P+ + + ++ I L Sbjct: 447 SIKQLIDDIVKEFNLYQWIKEKYPNKDEQEERKGSIDVLKSFI---------VNDDLQFF 497 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 D + + V + ++ + + +K V ++G+ D +P Sbjct: 498 IDFVQTSNMNIKKK---DKDGVKLMSIHRSKGLEWKSVFVIGIQDTRFP----------- 543 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 R+ +++ LF A A + LY+S IGR+ Sbjct: 544 ------NARNGLNEEARLFYVATTRAIENLYLSEIGRNNSF 578 >UniRef50_C0GDI3 Recombination helicase AddA n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDI3_9FIRM Length = 1229 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 118/1127 (10%), Positives = 265/1127 (23%), Gaps = 215/1127 (19%) Query: 49 TLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLP-QLLERED 107 L+ ++G + I ++ + + ++ + + + + Sbjct: 156 ELAHRYGGKTADE--GLGRLILRLYRYTWSNPWPRQWLAEAATAFNVPEGVETEEGLEKW 213 Query: 108 FTLLRHYLT-DDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGE------ 160 L+ +L + + Q + K + L Y L E +E L Sbjct: 214 LPPLKEHLGLSLAHAKSSLQRAGKLCNRPGGPLAYENRLLEDLEQVENLESLVAGSWDAL 273 Query: 161 AQAWQAPLWKAL-------------------VEYTHQLGQPRWHRANLYQRFIETLESAT 201 +AWQ +K L + ++ + Sbjct: 274 REAWQGLDFKRLPAVKDCDEELKEQVQALRKKAKEALSKIGKTFFERSAADYLREIGELA 333 Query: 202 TCPPGLPSRVFIC-GISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKL 260 L S V G L L G+I ++ Sbjct: 334 PLIEVLTSLVARFAGEYGQAKKMYGLLD-FNDLEHHCLQILMAEDAPPGEIIPSEAAREV 392 Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLFNSDG----EQDVGNPLLASWGKLGRDYIYLLSD 316 R ++ + + VG+ + + D L Sbjct: 393 RARYEHVLVDEYQDINPVQDAILTLVSRQGETTPNLFMVGDVKQSIYRFRLGDPGLFLER 452 Query: 317 LES-------SQELDAFVDVTP--DNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 + ++ + +L A + + + Sbjct: 453 YRRYPAEKGKKERKLLLSKNFRCRHGVVTAVNYLFRQLMTTQAAELEYDREAELVCGAHY 512 Query: 368 DPLDSSITFHVCHSP-------------------------QREVEVLHDRLLAML----- 397 +RE V+ ++L +L Sbjct: 513 PEPSQECKISGLVDVHLLEREQDGDHDRQGDDEGEDLDALEREATVIAGQILVLLNGPDG 572 Query: 398 ---------EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSH 448 + +T RDI++++ + + A +P + Sbjct: 573 ARYVFDKEEKAYRPVTYRDIVILLRATSNSAN----RLVEILARHGIPAYADLSSGYFAA 628 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 +E +SLL + D+ + A+L P++ T E L +RQ Sbjct: 629 TEVETMLSLLQVVDNPRQDIPLAAVLRSPLVGL----TVEDLAAVRQ------------- 671 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 A E + +VL + L L L Sbjct: 672 ---------------------------AGERNDDFFDAVLAASQQ--QFPGLSEKLTDFL 702 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 L WR +E V R+ + ++ A + + + Sbjct: 703 TTLERWRTLARRETLATFITAVYRESGYSDYVAGLPDGAQRQANLRALFSRARQFDRFAR 762 Query: 629 GDAVPLSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG--- 683 ++L + + + V I ++ + + F VV L + Sbjct: 763 QGLFRFLSFIEQLRRSGEDLGTARALGEKENVVRIMSIHKSKGLEFPVVILGDLGKTFNF 822 Query: 684 -------------------VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQ 724 V P + G+ R ++ + AL A+ Sbjct: 823 QDQRSEMLVHRRLGLGPLIVEPEKKLRYPSLPYLALKIMGEAETRAEEMRVLYVALTRAR 882 Query: 725 QKLYI------------SYIGRSIQDNSERFPSV------LVQELIDYIGQSHYLPGDEA 766 ++L + S+ + S + L + + + G Sbjct: 883 EQLILVGSARGLDKHLESWRQLLAHCGEQLPASELTRARTYLDWLGRALIRHGDVEGRTE 942 Query: 767 LNCDESEARVKAHLTCLHT--------RMPFDPQNYQPGERQSYAREWLPAASQAGKAHS 818 ++ + LT + + + + S R + A + Sbjct: 943 TYTWQAGEESRFRLTVWDRESLSEIAVKREGEEEYTKRDAILSLRRVKVDTADDLREEIR 1002 Query: 819 EFVQPLPF----TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 + LP + + L+R ++ + + + + L Sbjct: 1003 TRLAYKYPYARLDLPAKLSVSELKRRFSELEEEEGEKKA-FTPTSWSRPAFIQQKAGLSP 1061 Query: 875 LSRYQINQQLLNAL-----VEQDDAERLFRRFRAAGDLPYGAFGE----IFWETQCQEMQ 925 R + Q+L L +++ E + AG L A + E Sbjct: 1062 AERGILYHQVLQHLDLSLSLDERGIEGQIHYLQKAGVLAEEATDYLDPGLIAAFFTSEAG 1121 Query: 926 QLADRVIACRQPGQSMEIDLACNGV---------QITGWLPQVQPDGLLRWRPSLLSVAQ 976 ++ + + + L + I G + + + Sbjct: 1122 RVVQKYRSEVYREWPFTLSLPAAEIATGNGDESLIIQGIIDLLVRTPQGFV-VIDYKTDR 1180 Query: 977 GM--------QLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQ 1015 + + E L Y A + + + F + + Sbjct: 1181 LPGGGLNELAKRYEEQLRYYARAVETILSVPVCGAYLYAFAAGESVR 1227 >UniRef50_C8PAK3 ATP-dependent exonuclease subunit B n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PAK3_9LACO Length = 1157 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 82/701 (11%), Positives = 214/701 (30%), Gaps = 89/701 (12%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + S E+ + + + + +D +V+ ++ Y ++ +F Sbjct: 302 VHLIKADSRYAEINFVAQTIYQQVVFNH-YRYKDFLVLAPNLSEYETYLTPIFSQ----N 356 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE----EG 489 + ++ + HP++ ++ + D F ++D++ +L +L + + Sbjct: 357 NISMFNDLQKQMKFHPLVVMIENIADINDMGFKTQDIITILKTRLLIPEWYTDDIKFIAD 416 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + L +V I + + + L ++ +E Q ++ Sbjct: 417 VDLLENFVLAHNINHQLWKKSFYDFVDNNISH------LDQI--NEKVEKLDKLRQFIIE 468 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 ++ + ++ + + + LE+W A D + Sbjct: 469 NIDNLITQLHKLTNVQEAVTLFWNFLLKNKINKKLEKWRNT------AINNGDLQLAQQP 522 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMR 668 I ++ + + + D L + SQ V + + ++ Sbjct: 523 EQIWALLNKLLKDYVLIA--EEFNTENFFDILISGFSEANFSQIPSVLDAVTVSEIGMVQ 580 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGF----------DLMSQKPKRGDRSRR---DDDRYL 715 + FK V ++G + P+ GF + ++ + + + ++ D Y Sbjct: 581 NNSFKQVFIIGAVNNSLPKIQNKPGFLNIENINELNNSIADEQQYIENNQEVNNLDQTYQ 640 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI------DYIGQSHYLPGDEALNC 769 F + L A +YISY + N + S+ Q++ +Y+ + L+ Sbjct: 641 FGDVLSLASDGVYISYPIIN-VSNEKMEASIFYQDIKNTLNLTEYVQHDLPENQQQLLSF 699 Query: 770 DESEARVKAHLTCLHTRMPFDPQN---YQPGERQSYAREWLPAASQAGKAH--SEFVQPL 824 + ++ L + D N P + + A+S K + + Sbjct: 700 ITTPQASLGYIVYLKNKTNDDISNLLALTPSNQALLFDNVIQASSFKNKPVNLTPALAQE 759 Query: 825 PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI-PDTEPFILEGLSR---YQI 880 + + + L+ F+A+ F L ++ R E+ + + E + R Y Sbjct: 760 LYGNNINISISQLETFYANSYEYFLTYGLHLHKRFENELTNIQSGNYYHETMDRLVKYLK 819 Query: 881 NQQL-LNALVEQDD------AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIA 933 +L L ++ + + + +L F E ++ + +++ + Sbjct: 820 QHKLDFAELTKEKISVILANIQDELKTKGSYRELLGDPFNEFLFKCLDRTTKKVVNYWHQ 879 Query: 934 --CRQPGQSMEIDLACNG--------------------VQITGWLPQVQPDGLLRWRP-- 969 C+ + +L+ + + G + +V Sbjct: 880 NMCQTKFSPLYSELSFGNKEYIAGLSYQFIDKQQKTHHISLRGKIDRVDLLKDCDNEILQ 939 Query: 970 -SLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFP 1009 + + L S L + +D F Sbjct: 940 LIDYKSSAKKFDFN--LFKNGISMQMLSYLSVLQDNSHIFS 978 Score = 65.4 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 29/257 (11%), Positives = 71/257 (27%), Gaps = 49/257 (19%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIA--- 57 M+ + S + L+ + + + L++ + ++V + TL + I Sbjct: 1 MINIITSTQAYDLQNEILNMAVKTYLNNKTKKTFVIVPNHVKFTTEIDTLKKIANINKQD 60 Query: 58 ----ANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLERED-FTLLR 112 N+ + W K+ LP++++ +L Sbjct: 61 SVSVTNLQVLSFSRLAWYFLRNQ-----------------KI--ALPEIIDDATSLMILE 101 Query: 113 HYLTDDSDKRKLF---------QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQA 163 + + D+ LF Q+ L Q V L + E Sbjct: 102 KIVKNKKDELLLFNNSNNGSLKQIYESII-LIHQGNV----DLNSISHEAVTEETSRKLH 156 Query: 164 WQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFIC-GISALPPV 222 ++ ++ + + L++ + + F G S Sbjct: 157 DLQIIYDEFIQMLGDHFTTKDGIQLI-------LKTVMNKKLSIDNMNFFFCGFSYFSLS 209 Query: 223 YLQALQALGKHIEIHLL 239 L ++ + K + + Sbjct: 210 ELNIVKIIAKKAHLSVF 226 >UniRef50_Q88U41 ATP-dependent helicase/nuclease subunit A n=3 Tax=Lactobacillus plantarum RepID=ADDA_LACPL Length = 1249 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 58/626 (9%), Positives = 164/626 (26%), Gaps = 130/626 (20%) Query: 189 LYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYW 248 + ++ + T R + S L + LQ L + Sbjct: 349 IVTELVDATKQFKTAFAAEKRRRHVLDFSDLEHLTLQILTS------------------- 389 Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD--GEQDVGNPLLASWGKL 306 + A LA+L + ++ + L VG+ + + Sbjct: 390 DNESSQAALAQLRAQFEEVMVDEYQDINSLQESILQLLARDQPGNMFMVGDVKQSIYQFR 449 Query: 307 GRDYIYLLSDLESS-------QELDAFVDVTPDNLLHNIQSDILE--LENRAVAGVNIEE 357 D + L + + + + ++ + I ++ E Sbjct: 450 LADPLLFLHKYHDFGTNPEHGERIVLAENFRSVANVDHLTNLIFSQLMDAPVGQIDYDEA 509 Query: 358 FSRSDNKRPLDPLDS---SITFHVCHSPQ-------RE------------VEVLHDRLLA 395 + ++ + + + E + ++ ++LA Sbjct: 510 AYLKYGPKDYPADMPQTTNLLLYQTETDKSTEDVSTDETNFSIDDPAVGSITMVAQKILA 569 Query: 396 MLEEDPTL-----------TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 + +D + D+ ++V + I ++P ++D + Sbjct: 570 LKAQDKPIYERANGEYRPFRYSDVALLVPTRNHNLTII-----DVFKRYHIPVVVNDAQN 624 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 + ++LLS+ D+ + ++A+L P++ Sbjct: 625 YFQTTEIRIMMALLSIIDNPYQDIPLVAVLRSPIV------------------------- 659 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 G+D++ + L + ++ + P ++ ++ + Sbjct: 660 GLDENQLVYLRIQNKTSDYFQAVQD--------------FYHHYPTGPATEYGDQVYAKI 705 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 + L QL +R + + + + ++ Sbjct: 706 ETFLTQLTEFRDLARRNQIVTLIWQIYERTGFLDYVGGMPAGKQRQANLHALYERAYTYE 765 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERIS-QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 + + ++ + A VN+ T+ + + + V+ ++ M+ Sbjct: 766 QGSFKGLFQFVRFIRRMQEKDQDLAAAVAETDAEAVNVMTIHGSKGLEYPVIFVMDMDKQ 825 Query: 684 VY----------------------PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 P + + R ++ A+ Sbjct: 826 FNQTDTRSSALLDREAGIGITYLDPETRVKYPTLPQVVTKQVVSKKMRAEEMRKLYVAMT 885 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVL 747 AQQ+LY+ + I +E++ Sbjct: 886 RAQQQLYLVGTIKDIDTATEKWRQAF 911 >UniRef50_B0RA36 Putative helicase n=1 Tax=Halobacterium salinarum R1 RepID=B0RA36_HALS3 Length = 1211 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 87/867 (10%), Positives = 190/867 (21%), Gaps = 197/867 (22%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-----EQDVGNPLLASWGKLG 307 + A +L + ++ + R E L D VG+ + +G G Sbjct: 388 NDAVTERLREQFAAVMVDEFQDTDPRQWELVKLLTGVDEGTASNVFLVGDEKQSIYGFRG 447 Query: 308 RDYIYLLSDLESSQEL-------DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 D + Q + D + + L+ + E+ Sbjct: 448 ADVTTFGNARRELQTVNEARGVDDVPDGEAESPTALELSGNFRTLDEPLSFLNELFEYLL 507 Query: 361 SDNKRPLDPLD--------------------SSITFHVCHSP------------------ 382 +P + S+ + Sbjct: 508 QPEGDTHEPYEAPPQELTTQRDRIEDIEGLTGSVEYLAVPDDADTAAELFGDDHPVAEGA 567 Query: 383 -----QREVEVLHDRLLAMLEEDPTLT-----------PRDIIVMVADIDSYSPFIQAVF 426 + E + L RL + ++ P + P D +++ + Sbjct: 568 LDHTIEAEAQALAARLTHLFDDPPQVQDPDTGVHREATPDDTAILLRRRTHLDRY----- 622 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 A + +PY + P ++A +LL + + +L P+ Sbjct: 623 QRALEEYDIPYTVVGGVGFYDTPEVQALTNLLRVLGDPEDDVSLYGVLRSPLF------- 675 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 G L A+ A W + Sbjct: 676 ----------------------------------------GFADDRLAPAVAEADSVWDA 695 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE----WLPVCRDMLNAF-FLP 601 + D+ LA L+ WR P E W + +++ +L Sbjct: 696 LAETDDP---------QLADAFDLLSTWRTLSGCAAPSENGVLPWNRLLSRVIDDTGYLA 746 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD----QERISQRFLAG 657 + + + + L + ++ + + A Sbjct: 747 SVSADERGRQAIANVEKFRDQVRTWSENGVHTAAGLLHRIDRQAEIDPREGEADIPGDAE 806 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVY-----------------------PRQLAPLGF 694 V I T+ + + F +V + + + P P Sbjct: 807 GVRIMTIHSAKGLEFPIVTVPDLGSDLNFGRSVDDHGYVRLVDGTDDAPPVPAVGGPDPG 866 Query: 695 DLMSQKP--------KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 D S + ++ R + + L A + L + D S Sbjct: 867 DAFSIEKTAVHEYADRQSRPQERAESKRLLYVACTRTRDHLLLCGTHDIDVDE-----SG 921 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW 806 ++ D A V + R D +Y Sbjct: 922 AIELGEPAAFDDADRWRDWVQPALLDGALVAEAIRDGQARGEMDEASYTVRRPPRPVDWH 981 Query: 807 LPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 + P + + TL A S Sbjct: 982 TDDDAVDPALEISIPSPPSLAPAKRIAATTLVNAVAD------------ASTDGHSYSQR 1029 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 E L + + ++ +D+ L R + + Sbjct: 1030 EESAGLSPTTFGTVVHRINELRPPRDEWSTLIHRLSRMTGEVPTEADVREAVDHAADAVE 1089 Query: 927 LADRV---IACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQG------ 977 D + ++ + + +I G++ ++ + Sbjct: 1090 FVDHIESGSQLQEVHDEYSVVARIDESRIAGYIDRLLVMPDA-FHIIDYKTNDLSATTSD 1148 Query: 978 ---MQLWLEHLVYCASGGNGESRLFLR 1001 + L Y + + +R Sbjct: 1149 ELADHYRPQMLAYALALLQHDQTRDVR 1175 >UniRef50_A0PZA6 Superfamily I DNA helicase (Rep-like helicase) n=5 Tax=Clostridium RepID=A0PZA6_CLONN Length = 727 Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats. Identities = 48/506 (9%), Positives = 128/506 (25%), Gaps = 91/506 (17%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 IK+ L + ++ + E L + VG+ +G G Sbjct: 247 IKNLRTLNGYRKLFKYMLIDEFQDCDGIQIEILKLLNEDNSIFAVGDEDQCIYGFRG--- 303 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 + + F D + ++ ++ A + + ++ N + Sbjct: 304 -------SKPECMVNFHKYFKDGKKLFLSTNYRCPKSIVGASDYLIKNNKMRNDKNFKAN 356 Query: 371 DS---SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 I + + + + + ++ D ++ I Sbjct: 357 KKDMVEINVRSYKDEREQSDRIAMDITKLMSMGD-YNYEDNAILYRTNVESRSLI----- 410 Query: 428 SAPADRYLPYAISDRR-ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 + + +P+ + D+ H + + I+ L L E L +++ P Sbjct: 411 DSFIRKKIPFKLLDKEYNFFEHFICKDIIAYLKLSIDSSDKESFLRIINKPFRYISKIN- 469 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + S + Sbjct: 470 --------------------------------------------LAKVEKDNSGYDCFDI 485 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 + ++ + + + + LN A L L + + Sbjct: 486 LKENEKIPPFQLKKIDEIKKDIQNLNRMSLSGAINSVLHTL--DYYQYLKDYSMKFKLDI 543 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD-QERISQRFLAGPVNICTLM 665 + + I +++ + + + +++ D + V T+ Sbjct: 544 SELEEILEEFISASQDY--------TTIITFLAHISEVKDEIKNNKNNEEKNGVIFSTIH 595 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 ++ + FK V ++ N+ P D+ + R LF + + Sbjct: 596 GVKGMEFKNVFIINCNENNIPFGKEHEDIDIEEE-------------RRLFYVGVTRTIE 642 Query: 726 KLYISYIGRSIQDNSERFPSVLVQEL 751 L+I + + S ++E Sbjct: 643 NLWICMS--NEIKGKNKVASRFIKEC 666 >UniRef50_A6LPC4 ATP-dependent helicase/nuclease subunit A n=4 Tax=Clostridium RepID=ADDA_CLOB8 Length = 1245 Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats. Identities = 81/981 (8%), Positives = 222/981 (22%), Gaps = 212/981 (21%) Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 + ++ L F L + L+ Sbjct: 326 QQMLRNIQGSYPYIKKLIELVLEFSARFSKRKRERNIL----------DFNDLEHLCLKI 375 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA----GQ 285 L + + +I + ++ + + Sbjct: 376 LSDYDDE------------NNIIPSSIAMNFKEYFDEVLVDEYQDSNNVQETIINLVSRK 423 Query: 286 LFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLES-------SQELDAFVDVTPDNLLHNI 338 ++ VG+ + + + + ++++ + + + + Sbjct: 424 NDDNPNVFMVGDVKQSIYRFRQAKPELFIEKYNTYDSSNGVNRKIQLYKNFRSRREIIDG 483 Query: 339 QSDIL---------ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITF----------HVC 379 + I ELE +N+ +NK + I V Sbjct: 484 VNYIFKEVMSEVVGELEYTDEEALNLG-ADFKENKFKDTIVGGPIEVNIIDKSHNETVVE 542 Query: 380 HSPQRE--------VEVLHDRLLAMLEEDP----------------TLTPRDIIVMVADI 415 + ++E ++ R+ ++ + L RDI++++ Sbjct: 543 DNEEQEEINNVILEGRIVAKRIKELMSKSEDEQIFKVLDKESGEYRPLKYRDIVILLRAT 602 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 ++ + +P + ISLL + D+ V++++ Sbjct: 603 KNW----SEPLLDELSAEGIPVYADTGSGYFESIEIRTIISLLKVVDNPMQDIPVISVMR 658 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 P++ ++ + + + + + Sbjct: 659 SPIMGFS---------------------------AEEISDIRLVKKDNYFYENIKYISEE 691 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 A S + VL + ++ WR E + D Sbjct: 692 AYNSINESYSDVLIA------------KCKYFINSVDKWRNKSIYMAIDEFIWYLYMDTA 739 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL--AQRLDQERISQR 653 ++ + + + ++L + Sbjct: 740 YYGYVGAMPNGVLRQANLKILFQRARQFEKTSFKGLFNFINFINKLIKSSGDMGSAQVLG 799 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMND-----------------GVYP-----RQLAP 691 V I ++ + + F VV L G+ G+ P + Sbjct: 800 ENEDVVRIMSIHKSKGLEFPVVFLCGLGKNFNLMDLNKSILYHDELGLGPDFIDIGKRFS 859 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF-------- 743 +G K+ ++ + A A++KL ++ +++ ++E++ Sbjct: 860 IGTLAKESIKKKMKFETLSEEMRILYVACTRAKEKLIMTGTVGNLEKSAEKWLGSASLDY 919 Query: 744 ----PS------VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 PS + + + Q E+ + + Sbjct: 920 NRISPSEVLKGKSYLDWICMSLCQHRDGSVLSESFGTENLILKDDNSRWKVSFWNKGDLI 979 Query: 794 YQPGERQSYAREWLPAASQAGKAHSE-------------FVQPLPFTLPETVPLETLQRF 840 + E K + + T+ + + L+R Sbjct: 980 DKTKTEVLEQGEGYELTIINNKPYDNYLYEEVDKILSYKYPFKASTTIKSNISVSDLKR- 1038 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL-----LNALVEQDDAE 895 H + +L + + E L + + N + ++ + Sbjct: 1039 -RHAEEDYDTEQL-YREKVKVVPKFLQEKKGLTPSEKGTAVHFVMKKIDFNRVSSTEEIK 1096 Query: 896 RLFRRFRAAGDLPYGAFGEIFWETQCQEMQ-QLADRVIAC--RQPGQSMEIDL------- 945 L I + L +++ R EI Sbjct: 1097 EQLHELFEKEFLLSEELKVINPTKILSFFRSDLGKKILDLNCRGEKIYREIPFYTEISSL 1156 Query: 946 ----------ACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL--------WLEHLVY 987 +++ G + M+ + + L Y Sbjct: 1157 EVDKTLDNIYKDEKIRLQGIIDCFFEY-KGDIILIDYKTDYIMEGHEDEFKEKYRKQLDY 1215 Query: 988 CASGGNGESRLFLRKDGEWRF 1008 + + ++ + F Sbjct: 1216 YSDAIFKLTGKKVKYKYLYSF 1236 >UniRef50_B5VVV8 UvrD/REP helicase n=2 Tax=Arthrospira RepID=B5VVV8_SPIMA Length = 1070 Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 92/846 (10%), Positives = 207/846 (24%), Gaps = 155/846 (18%) Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 LQ L + +P R R ++ + E L Sbjct: 309 LQKLKWQGRVLTFADLEIGALTALQNNPTIQLYYQQRWRSFLVDEFQDTNPIQGEILELL 368 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE 346 + VG+ + +G D + + ++ + Q I ++ Sbjct: 369 TQTGDLTIVGDKKQSIYGFRRADIG-VFNKFRKRIIDHQGDEIILNQSFRTHQKLINQIN 427 Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHV----CHS-----PQREVEVLHDRLLAML 397 + + ++ V + E ++ L ML Sbjct: 428 QVFSPLLGDLRQDLEAVRIDPPSPRETLQVFVIPKTAETDINQRRIAEGNLIAKTLKEML 487 Query: 398 -----------EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 ++ + P DI ++ + + G A A +P A S Sbjct: 488 DNQIPVFDKQTQQLRPIQPGDIAILTRTWEPLDSY-----GEALAAAQIPLAPSGGGNLL 542 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 + SLL ++ALL P Sbjct: 543 ETQEAKDAWSLLKFLADPGDDIALVALLRSPFF--------------------------- 575 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 R+L + +S + L A Sbjct: 576 -------------------AISDRLLFNVSRQSQLSHKSTSENISWWQILTTASPAEFAK 616 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 + L + E P + + + ++ ++ Sbjct: 617 AIDTLKTLLKQRQIEPPSRLLQIADQLTGYTAIIANLPASNRRLADFSGFRELVQILEQ- 675 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP 686 D + L + + V++ T+ + + + +V + ++ P Sbjct: 676 GTDDLFGVVRRLKRLKDKAVTVERPPINTSNAVSLMTIFAAKGLEWPMVVVADLS-RPSP 734 Query: 687 RQLAPLGFD--------------------LMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 P+ FD L + R + + + AL ++ Sbjct: 735 NSSVPVYFDPEYGVAIRCKDDDKDLKDPVLYNWLKYRNQQREEAEALRILYVALTRSRDY 794 Query: 727 LYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 + ++ + +L + ++ +N D+ V Sbjct: 795 ILLTAPQEKGN---------YLDKLYLGLQAANIPITTLEINSDDIIPPVPPSPPPPAIN 845 Query: 787 MPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVR 846 P + + +P+ +L + P R Sbjct: 846 PPL-------------------------------LTNAMTSGLFELPVTSLSEYKRCPAR 874 Query: 847 AFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD-AERLFRRFRAAG 905 F L +E++ G+ Q+ L + D + + Sbjct: 875 FQFMYILGHPGLSEEANQ---------GMIIGQLVHNALEYDIRDIDQLGKFAQNGSNEQ 925 Query: 906 DLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLL 965 L + ++ +E ++ + + +E+ L GV G + + +L Sbjct: 926 SLREAIYLAQEFDN-TEEFKRFI-----HPKNQREVELKLDILGVTFNGVADLIGDNWVL 979 Query: 966 RWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPP----LAAEQALHYLS 1021 ++ + + L L A + +LR + F P A +A + Sbjct: 980 DYKTDKVMRPEHHNLQLWAYA-KALNCSEAHIAYLRHKKCYSFSPEILAKTAHEAESIVR 1038 Query: 1022 QLIEGY 1027 ++EGY Sbjct: 1039 DIVEGY 1044 >UniRef50_Q1JCJ8 ATP-dependent helicase/nuclease subunit A n=14 Tax=Streptococcus RepID=ADDA_STRPB Length = 1222 Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 83/921 (9%), Positives = 202/921 (21%), Gaps = 171/921 (18%) Query: 168 LWKALVEYTHQLGQPRWHR--ANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQ 225 L + L ++ H + + L ++ + + + + + + S + ++ Sbjct: 345 LHQKLKQFRHLETILMYQKDCFPLLEQLQDFVLAFSEAYLAVKIQESAFEFSDITHFAIK 404 Query: 226 ALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQ 285 L+ + ++ + Sbjct: 405 ILEE-----------------------NTDIRQSYQQHYHEVMVDEYQDNNHMQERLLTL 441 Query: 286 LFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL 345 L N VG+ + + D +Q+ + T + ++ + Sbjct: 442 LSNGHNRFMVGDIKQSIYRFRQADPQIF------NQKFRDYQKKTEQGKVILLKENFRSQ 495 Query: 346 ENRAVAGVNIEEFSRSD-----------------NKRPLDPLDSSITFHVCHSPQR---- 384 + + + + + LD + +S + Sbjct: 496 SEVLNVSNAVFSHLMDESVGDVLYDEQHQLIAGSHAQTVPYLDRRAQLLLYNSDKDDGNA 555 Query: 385 ----------EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 EV ++ ++ + D + DI ++V+ I F Sbjct: 556 PSDSEGISFSEVTIVAKEIIKL-HNDKGVPFEDITLLVSSRTRN-DIISHTFNQY----G 609 Query: 435 LPYAISDR-RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P + + + L ++ ++ALL P+ F E+ L + Sbjct: 610 IPIVTDGGQQNYLKSVEVMVMLDTLRTINNPRNDYALVALLRSPM----FAFDEDDLARI 665 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + + + R ++G Sbjct: 666 ------------------ALQKDNELDKDCLYDKIQRAVIGRG--------------AHP 693 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 + L+G L L L WRR + + D F+ Sbjct: 694 ELIHDTLLGKLNIFLKTLKSWRRYAKLGSLYDLIWKIFNDRFYFDFVASQAKAEQAQANL 753 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRD-ELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 + + Y + D L + D + VN+ T+ + + F Sbjct: 754 YALALRANQFEKSGYKGLYCFIKMIDKVLETQNDLADVEVAAPKQAVNLMTIHKSKGLQF 813 Query: 673 KVVCLLGMN---------------------------------DGVYPRQLAPLGFDLMSQ 699 V +L + + + Sbjct: 814 PYVFILNCDKRFSMTDIHKSFILNRQHGIGIKYLADIKVLLGETTLNSVKVSMETLPYQL 873 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 + + + L A+ A++K+Y + P L + L + + Sbjct: 874 NKQELRLATLSEQMRLLYVAMTRAEKKVYFIGKASKSKSQDITDPKKLGKLLPLALREQL 933 Query: 760 YLPGDEALNCDE---------SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 D L + ++ + + R+ A Sbjct: 934 LTFQDWLLAIADVFSTEDLYFDVRFIEDSDLTQESVGRLQTPQLLNPDDLKDNRQSETIA 993 Query: 811 SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 + + +P + V+ + S Sbjct: 994 RALDMLEAVSQLNANYEAAIHLPTVRTPSQLKAAYEPLLEPI-GVDIIEKSSRSLSDFTL 1052 Query: 871 IL-------EGLSRYQINQQLLNALVEQDD------AERLFRRFRAAGDLPYGAFGEIFW 917 E QL+ L + L +I Sbjct: 1053 PHFSKKVKVEASHIGSALHQLMQVLPLSKPINQQTLLDALREIDSNEEVKTALDLKKIES 1112 Query: 918 ETQCQEMQQLADRVIACRQPGQSMEI----DLACNGVQITGWLP--QVQPDGLLRWRPSL 971 + Q I ++ + G + + D ++ Sbjct: 1113 FFCDTSLGQFFQTYQKHLYREAPFAILKVDPISQEEYVLRGIIDAYFLFDDHIVLVDYKT 1172 Query: 972 LSVAQ---GMQLWLEHLVYCA 989 Q + + + L A Sbjct: 1173 DKYKQPIELKKRYQQQLELYA 1193 >UniRef50_C6MIZ6 TonB box domain protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIZ6_9PROT Length = 923 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 109/879 (12%), Positives = 233/879 (26%), Gaps = 138/879 (15%) Query: 222 VYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSE 281 +YL++L LL + W I + K L R + + E + Sbjct: 67 IYLESLYVKPVVTLPLLLTVYQEQVLWESIILSSEAGKALLRISQTARLVSEAWHLAHAW 126 Query: 282 NAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ------ELDAFVDVTPDNLL 335 + L+ W + ++ L + ++ E F+D+ + + Sbjct: 127 RLIHRLGDIVPNEDVREFLS-WAETYQNITTLTRQTDQARICDLITEQYEFLDIKKPSRI 185 Query: 336 HNIQSDILELENRAVAGVNIE---EFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR 392 D++ + E ++ ++I + Q E+ Sbjct: 186 ICYGFDVITPQQILFLKKLSNCGCEVVIANPTIQWPQSLATIQRFEYTNSQEEIYQAAIW 245 Query: 393 LLAMLEE-DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVL 451 + +E ++ + ++V + Y + +F HP + Sbjct: 246 ARSKIETVSNSVNSVRVGIVVPALMKYRNTLIRIFKEVM-----------------HPDI 288 Query: 452 EAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 + + F LAL + P++ F L L Q V + I + + Sbjct: 289 RLALPGAKQNIAPFNVSLGLALTNYPLIDIAFVG----LALLDQKVEFNRISYWL----R 340 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 + + + R L + ++ E +L S G ++ H S+L Sbjct: 341 SPFLAGSENEMSQRVLLDAQIRRFSEPEISLERLFILVSRASGGKECPILLHCLSVLRIF 400 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 R + + + + F + +++ + Q Sbjct: 401 RQTRLPQSDSHTVFARIIAEVLQILGFPGERGLDSSEFQTLKKWQMLVANFAALDQVNAK 460 Query: 632 VPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 L Q PV I + + F + ++G++D +P + P Sbjct: 461 TSYPEAVSRLRQMAANTLFQPETPNVPVQIIDVFEATGMEFDHLWVMGLSDEQWPLRSHP 520 Query: 692 LGFDLMSQKPKRGDR-----SRRDDDRYLFLEALISAQQKLYISYIGRS-IQDNSERFPS 745 F + + K + L L SA+ + +SY S +D E S Sbjct: 521 NPFLPLELQRKAKLPWGSTLESSAYCQRLTRNWLSSAKD-VILSYPRYSNDRDGHELKSS 579 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 L++ + P E+ Sbjct: 580 PLIRSI------------------------------------PLREAVILDMEQHHERII 603 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 S + ++ + A P RA+ + RL + Sbjct: 604 QSCEMEYIVDCESSPLGKEMAKQGIKGGTSVIKDYAACPFRAWAKHRLSITGLDAP---- 659 Query: 866 DTEPFILEGLSRYQINQQL---------------------LNALVEQDDAERLFRRFRAA 904 L R + Q+ L ++E + + + Sbjct: 660 ---HTGLNAAERGLLVHQVLAQLWQQLKTKEALDDISDHNLERMLEGITNSVILQMEQYR 716 Query: 905 GDLPYGAFGEIFWETQCQE-MQQLADRVIACRQPGQSMEID--LACNGVQITGWLPQVQP 961 G F +I + ++ L + + E + + + L ++ Sbjct: 717 PIALSGRFAQIEQRRLFRLVLEWLVEEKKRSSFRMIAAEEKCLIQIGDLILNARLDRIDE 776 Query: 962 DGLLRWRPSLLSVAQ--------GMQLWLEHLVYCASGG----NGESRLFLRKDGEWRFP 1009 +W ++ + +Y G + + K GE F Sbjct: 777 LEDGQWIVIDYKTSRKSIQSMIGERPDEPQLPLYLVMAGMKQQAAGAAFAVIKRGEMGFM 836 Query: 1010 PLAAEQ-------ALHYL---------SQLIEGYREGMS 1032 +A E A L LIE +R+ ++ Sbjct: 837 AVAREADLLPGIKAFSQLEKCTRFNTWEDLIEAWRQSLT 875 >UniRef50_A8SJB2 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SJB2_9FIRM Length = 1261 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 76/916 (8%), Positives = 210/916 (22%), Gaps = 209/916 (22%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR 308 G+IK + + ++ + + + VG+ + + Sbjct: 391 GNIKPSKTALEYQEKYSEVFIDEYQDSNLVQEILLSAVAKENNRFMVGDVKQSIYRFRQA 450 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN----- 363 D + E+ ++ D+ N + ++ + + Sbjct: 451 DPSIFMEKYENYYRVE--EDIESFNRKIMLYANFRSRKEILEGTNLVFSKIMKKETGELD 508 Query: 364 -------------KRPLDPLDSSITFH---VCHSPQREVEV------------------- 388 K + + ++ + E E+ Sbjct: 509 YTVDERLNPMASFKESDENVGGAVEILLVDENSDSEDEDEIILTDEYSEDFEEMKSFKLE 568 Query: 389 ---LHDRLLAMLEEDPT--------------LTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 + + + M+ + +DI++++ S + ++ VF Sbjct: 569 CIKIANTIYNMMNNKENPFKVYDKNLDDYRKVEYKDIVILMRSPSSNTKILEEVFLEY-- 626 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +P ++ I+LL + D+ +++++ P+ ++ T + L Sbjct: 627 --NIPIYAESTGGYFDTFEVDTIINLLKIIDNPMQDIPLISVMYSPI----YNFTSKELS 680 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 +R + R L Y + E + + Sbjct: 681 EIR--------------------------------LVDRELKFYELLIKILEDEDIEIRI 708 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF-FLPDAETEAAMT 610 I++ + L + + +E + + ++ + Sbjct: 709 SLKEKISKFIYDLKLFIEK--------KSLVSADELIWFLYKYTGYYNYVGLLDMGEQRK 760 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR-FLAGPVNICTLMPMRS 669 Y +++ + D A V I ++ + Sbjct: 761 TNLMLLFEKAKNYEKNSYKGLFNFVNYIQKISLKSDISEAKLISEDANVVKIMSIHKSKG 820 Query: 670 IPFKVVCLLGMNDGVYPRQLAPLGFD----------------------LMSQKPKRGDRS 707 + F +V L N R + + K Sbjct: 821 LEFPIVFLANTNKKFNFRADDSNLVLHQKLGFGAVVYDMDKKTSFNSIMKKKIEKFKKNE 880 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS-----------------VLVQE 750 + ++ L A+ A++KL I+ + ++ E S + Sbjct: 881 QIAEEMRLLYVAMTRAKEKLIITGRVKDYENLREEISSGIDERGNISNYKILKINNYLDW 940 Query: 751 L-------------IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP--------F 789 + ++ +G+ G+E L + Sbjct: 941 ILSSINNLTVYGTSLNCLGRKENFLGNEDLKFQLNVNTKTEEFIEYQRIKEEIKTNEIIL 1000 Query: 790 DPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 D N + + +E+L + + + + + + Sbjct: 1001 DEDNIEVKQEMRTVKEFLEDRFNKEYVYKNVLNKPSSITVSEIKKMIQEEDEEKHQKYYK 1060 Query: 850 QMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL----VEQDDAERLFRRFRAAG 905 + +T E + I + L + +D ++ ++ Sbjct: 1061 EN---FVLKTPSFIHQGEEKVGFNSAEKGTIFHLAMQLLDFSKFDTEDVSKIREEIKSQI 1117 Query: 906 DLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL-------------------- 945 + E + + + + + + Sbjct: 1118 NSFVEKNIMSLDEIETININWIVKFIKSDIFKEIYIANKFGKLFKEKAIDYNIKLKNLFK 1177 Query: 946 -----ACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLE--------HLVYCASGG 992 + + G + + + LE L S Sbjct: 1178 DENIEEYEKIMVVGIIDLFFENENGEIILLDYKTDYVTKENLEEVKARYKVQLDLYKSAI 1237 Query: 993 NGESRLFLRKDGEWRF 1008 S + K G + F Sbjct: 1238 EDISGKKVTKKGLYLF 1253 >UniRef50_Q18AN9 ATP-dependent helicase/nuclease subunit A n=7 Tax=Clostridium difficile RepID=ADDA_CLOD6 Length = 1275 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 82/925 (8%), Positives = 218/925 (23%), Gaps = 232/925 (25%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD--GEQDVGNPLLASWGKL 306 G+I + ++ + + N++ VG+ + + Sbjct: 388 GNIVPSDIAVGYRNKFYEIFIDEYQDSNLVQEVLLKAVANTETPNRFMVGDVKQSIYRFR 447 Query: 307 GRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF-------- 358 L + + + + + E A I E Sbjct: 448 QAKPELFLQKYNNYNDKKG-----SSHRKIMLYKNFRSREEVVDAVNYIFENIMNENIGE 502 Query: 359 --SRSDNKRPLDPL-----------DSSITFH---------------------------- 377 + L + H Sbjct: 503 IEYTEKERLNLGANFNVDTDEKSIIGGATEIHLIQKDNKLDDDIINDKDDRINNKENEIE 562 Query: 378 ---VCHSPQREVEVLHDRLLAMLEEDP----------------TLTPRDIIVMVADIDSY 418 + Q E ++ + + +++ + + RDI++++ ++ Sbjct: 563 EEEKLDNIQLEARMVGNIIKDLMKVNEDGKIQKVYDKGIDGYRPVEFRDIVILLRATSAW 622 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 +P VF + +P ++ +SLL + D+ ++++L P+ Sbjct: 623 AP----VFADELMNMDIPTYADVGVGYFDTIEIKTILSLLQIIDNPMQDIPLISVLKSPI 678 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 T E L +R + + + + ++ F Sbjct: 679 FG----FTPEDLIDIRVQSKDKIFYEVLKSTAEYDGFTDSQNENESEFI----------- 723 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF 598 E + L++L ++ E + Sbjct: 724 -----------------PSEECINKSKDFLIKLKEFKEKSMYMSTDEFIWYLYTRTGYYA 766 Query: 599 FLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ--ERISQRFLA 656 ++ + + + ++L + + A Sbjct: 767 YVGALPGGSQRQANLKVLFERAKQFEETSLKGIFNFVNFIEKLKKSSSDMGSAKTLGENA 826 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMND-----------------GVYPRQLAPLGFDLMSQ 699 V I ++ + + F VV M G P+ + Sbjct: 827 NVVRIMSIHKSKGLEFPVVICSAMGKNFNTQDFKKSILYHHNLGYGPQFVDYERRISFPS 886 Query: 700 KPKRGDR-----SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF---------PS 745 K + ++ + A A++KL I+ R+IQD+ +R+ S Sbjct: 887 IAKEALKSKINIENLSEEMRVLYVAFTRAKEKLIITGSTRNIQDSIKRWSNGIESLDTIS 946 Query: 746 V--------LVQELIDYIGQSHYLPGDEAL-----------------------------N 768 + ++ + + L Sbjct: 947 QYEILKGKNFLDWIMPCVLRHRDLSNLLEEVGLDAVFNVEHNSKWYGKLWNKNDILVEKK 1006 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 DE + ++ L + P + E+ +Y + + + ++ + Sbjct: 1007 SDEEKESIEEILEKIDVNNPDSDYYGEIEEKLNYIYPYEFSTRKPATISVTEIKKIQNNY 1066 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 E + ++ +V + + E + G R I ++ L Sbjct: 1067 EEELINTIFEQ--------------KVILKKPLFIQNEEEREKISGTERGTIVHLVMEVL 1112 Query: 889 --------------VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEM-QQLADRVIA 933 + ++ + +A+ PY + + + ++ +R + Sbjct: 1113 DLKNVSSVNDIKSQIRGFVSKGIITEKQASIVNPYKIYKFFASNIGKRMLNAEIINREKS 1172 Query: 934 CRQPGQSMEIDL-------------ACNGVQITGWLPQVQPDGLLRWRPSLLSVA----- 975 +I + V + G + + Sbjct: 1173 IYAQVNMKDIYIYEKLINNDDKKLYDNESVMLRGIVDAYFEEDNQIVLV-DYKTDFVNEE 1231 Query: 976 ---QGMQLWLEHLVYCASGGNGESR 997 Q ++ + + L A + Sbjct: 1232 NINQIIEKYKKQLDLYADIIETLTG 1256 >UniRef50_C0EV13 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EV13_9FIRM Length = 1221 Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 92/938 (9%), Positives = 228/938 (24%), Gaps = 172/938 (18%) Query: 173 VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGK 232 + +Q E L+ P+ + + P+ + + + Sbjct: 284 ATKKDKEWADYEIVKEWHQEVKELLQKQKETVFTAPAEELQREAAGIYPLLEEYIVLAQR 343 Query: 233 HIEIHLLFTNPCRYYWGDIKDPAYLAKLLT-------------------RQRRHSFEDRE 273 EI+L + Y D + L L+ + + ++ + Sbjct: 344 FEEIYLAYKKEKNVYDFDDLEHFALELLVDHYDEGGQAYPSETAKTLAKKYKMIFVDEYQ 403 Query: 274 LPLFRDSENAGQLFNSDG--EQDVGNPLLASWGKLGRDYIYLLSDLESSQ------ELDA 325 L D VG+ + + L E ++ Sbjct: 404 DTNLVQETILEMLSEKDNNTLFTVGDVKQSIYRFRQARPDLFLRRNEKYHNEEEGVSIEL 463 Query: 326 FVDVTPDNLLHNIQSDILEL-------------ENRAVAGVNIEEFSRSDNKRPLDPLDS 372 + + + + E AG + L + Sbjct: 464 RDNFRSAPGVLCFTNYVFSRLMERDFGGVDYNEETALRAGEGGPMLEDKETSELLFFVKD 523 Query: 373 SITFHV--CHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 S+ E ++ R+ ++ + DI++++ Sbjct: 524 SVQTLEEAPEDVLTETALITKRIQELI--EEGYHYGDIVILLRSGAGR----MEPMAEFL 577 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 +P + ++ + ++ LS+ D+ + + +++ + TEE L Sbjct: 578 EKNGIPVSCENKTGYFHTREITIILNYLSVVDNVYQDIPMASVMLSSIGG----FTEEEL 633 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 L R+L+ M + + Y Sbjct: 634 TKL------------------------------------RILVREPMREQYTLYDLMCLY 657 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 + G EL + L +R ++ + + + + A Sbjct: 658 LQ-EGAEEELRAKIQHFYKDLQYFREQKKEQPLGVLLWDIYQRTGFYYDVQLMPDGAKRK 716 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMR 668 + + + ++L + E S V I T+ + Sbjct: 717 ENLLMLLKKAEDYEKTVFKGLFYFNRYMEQLKSYEIELGEAGSGTENENVVKIMTIHKSK 776 Query: 669 SIPFKVVCLLGMN------DGVYPRQLAPL----------------GFDLMSQKPKRGDR 706 + F VV + G++ D P P + ++ + Sbjct: 777 GLEFPVVFVSGLSKKFNRMDLTKPMLCHPELGIGMECVNITLRFHHPSLMKRAIQEKVWK 836 Query: 707 SRRDDDRYLFLEALISAQQKLYISYI--GRSIQDN--------SERFPSV---LVQELID 753 +++ + A+ A++KL ++ I + ++ R S L+ L D Sbjct: 837 DTLEEEMRILYVAMTRAKRKLILTGIIKAQDLEAGLRLQINTQKWRATSAMDWLLPILAD 896 Query: 754 YIGQSHYLPGDEAL-------------NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 + +E + + + +KA L +PF + + E Sbjct: 897 QFRSTQSEKSEEREGFLKNQETQKQAHSEGVTASWLKARLVNWEEILPFFEKERKQKEEF 956 Query: 801 SYAREWLPAASQAGKA------HSEFVQPLPFTLPETVPLETLQRFWAHPV-----RAFF 849 SY A + E+ + L+ + Sbjct: 957 SYQIFMDTVVIPADVSMVEQSFSYEYPNRDATKWKRKYSVSELKTLSQTTLPEEESSIML 1016 Query: 850 QMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD---------AERLFRR 900 + + E E + +R I +++ L + L Sbjct: 1017 PEQNNFEEEVKMPEFLKEEKSEIAATARGTIIHKIMELLPFGQIQTKKQLFEWIDALKGT 1076 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC------------N 948 + + + E+ + ++ + + + + Sbjct: 1077 YPESEKISAKWLYRAIEAFLFSEIGEKLSQMDRQGNLRKELPFTVGLPVSLMNADTQAED 1136 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLV 986 V + G + W + + L+ Sbjct: 1137 TVVVQGIIDICGEAEESLWLI-DYKTDRIKEGEESLLL 1173 >UniRef50_Q31P32 Putative uncharacterized protein n=2 Tax=Synechococcus elongatus RepID=Q31P32_SYNE7 Length = 1061 Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 108/934 (11%), Positives = 216/934 (23%), Gaps = 170/934 (18%) Query: 144 DWLAQWETGHLVEGLGEAQAWQA----PLWKALVEYTHQLGQPRWHRANLYQRFIETLES 199 D + Q WQA + L + A L + + L Sbjct: 217 DQIQQILAWSDTLFDPANSNWQATYDEFIKLKLTQAGSAKNWGSADTAKLLRTQCKVLRD 276 Query: 200 ATTCPPGL-------PSRVFICGISALPPVYLQALQALG--KHIEIHLLFTNPCRYYWGD 250 L S + + L+++ K + L F + R Sbjct: 277 RLRDEESLLSLRPNEADDWNRDQRSRIYEAFETVLKSIDARKRQDRCLDFNDLERGAVRA 336 Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD--GEQDVGNPLLASWGKLGR 308 ++ A + R R ++ + S+ L++ VG+ + +G G Sbjct: 337 LESEAVRSHYQQRWRYCFVDEFQDTNPTQSQILQALWDPQHLILTLVGDEKQSIYGFRGA 396 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 + + Q+ + + + +LE N+ V +++P Sbjct: 397 ATQVFRNWQQQIQQHQGHIVTLSQSFRTH--QTLLETINQVFEPVLDPYQPLRSDRQPPH 454 Query: 369 PLDSSITFHVCHSPQR--------EVEVLHDRLLAMLEE-----------DPTLTPRDII 409 PL + + E + ++ +++ + DI Sbjct: 455 PLPPIQQLVIEPEEKDSLEQARIQEATAIAQQIQTWIQQPLLVWDKPSNQHRPIAYGDIA 514 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 ++ ++ V+G +P ++ + PV +LL Sbjct: 515 ILCRRRAP----LETVYGEVLNQAGIPVLVNGGGSLLETPVGYDLQALLEFLVYPSNDLA 570 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 + LL P + + + + +E PA Sbjct: 571 LATLLRSPAFGLS-----------DAQLYQRAQQGKGWWSHRQERPDPA----------- 608 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 A+ + L R E PL Sbjct: 609 ----------------------------------FAAAIKILEGLLRSRFLESPLRLVQQ 634 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 R + L + Q + E Q D L +L Q Sbjct: 635 FDRATGYSAVLASLPQAQRLLADWQALLTFLRE--QPQAHDLELLLRYWKQLQQAEVVLP 692 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR--- 706 V + TL + + + VV + + PR A Sbjct: 693 RPVLEAGNAVTLMTLHGSKGLEWPVVIIPDLTAK--PRSQAETVLFDTELGVALRQPYVK 750 Query: 707 ---------------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 + + R L A+ L ++ Sbjct: 751 EQAAAYQFFKYRKQQAEDAETRRLLYVGFTRARDLLLLTSPKS----------------- 793 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 S + A P DP + + Sbjct: 794 ----------------AEARSPLDLLAPGLEQAAIQPLDPNSGTEIAVTATLP------- 830 Query: 812 QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI 871 A + + ++ P F+ + + Sbjct: 831 TADAPLFWQSTAAIAPQYSELSVSAFADYFRCPALFHFRYTQG----HPGAIDGEGAGTS 886 Query: 872 LEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV 931 L + + L + Q E L A ++ + + Sbjct: 887 DRPLQLGLLVHRALELDLRQ--PEALKPYCAAEDQDLIPQALQLASCFATEPVYSAVREQ 944 Query: 932 IACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASG 991 R+ +E+ +G+ + G V D +L ++ + QL L + Sbjct: 945 AQQREVTLHLELS---SGLVLKGRADLVGADWVLDFKTDQQPQPENYQLQLWAYAAALNR 1001 Query: 992 GNGESRLFLRKDGEW---RFPPLAAEQALHYLSQ 1022 +W F P AE+A L+Q Sbjct: 1002 PQAAIAWLRHNQLDWIEIEFIPDQAERAAVQLAQ 1035 >UniRef50_A2ST33 UvrD/REP helicase n=1 Tax=Methanocorpusculum labreanum Z RepID=A2ST33_METLZ Length = 1057 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 86/806 (10%), Positives = 176/806 (21%), Gaps = 180/806 (22%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF----NSDGEQDVGNPLLASWGKL 306 I++ A L R R ++ + ++ L ++ VG+ + + Sbjct: 347 IENDAVQKTLNARYRYILVDEVQDNDPVLTDIIRILCGDPKENNRLFIVGDAKQSIYLFR 406 Query: 307 GRDY--IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK 364 G D + ++ ++ + + + + I E + Sbjct: 407 GADVSGFNAFQTVFANDPVELDTSFRTVPEIIRLVNHVFSSV--FADPKEIWEAGYGELT 464 Query: 365 RPLDPLDSSITFHV-------CHSPQREVEVLHDRLLAMLEE-----------DPTLTPR 406 S+T S +RE L + + Sbjct: 465 PHRAGHSGSVTLIRLPTGETKAESMRREARTLASWIFDTVSRKKLSVYDKDGTCRPARFG 524 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 DI V++ + A +PY + + F +LL Sbjct: 525 DIAVLI-----EARTHMDKLRHALESYGVPYTEEKGYSFYQKQEVFDFTNLLKAIVYPEE 579 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 + +L P Sbjct: 580 DIPLYGVLKSPYFGIS------------------------------------------DA 597 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 L R G +S + + L W + E + Sbjct: 598 ELCRAAAGSGRPLIWRLRNYATANPDS---------KIGKAVGDLARWHAEIGTEPFVPF 648 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 + + A T + ++A + L ++ Sbjct: 649 LSRLIAESGIAAVYGGLPFGREAT---ANLEKLVAIARSRSMNRPFSVYEYLGILDTCME 705 Query: 647 QERISQR-----FLAGPVNICTLMPMRSIPFKVVCLLGMNDGV----------------Y 685 +E + V I T+ + + + ++ L G Sbjct: 706 EEFDEREGMVPSEEDDRVKILTVHASKGLEYPILALCFAGTGDGLKVSAPVFDAELGVGI 765 Query: 686 PRQLAPLGFDL---MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 P +LA G L + + + LF A+ A+ L IS G + E Sbjct: 766 PVRLAGEGEGLSFVIECLKPEMKAKLLAERKRLFYVAMTRARDHLVIS--GTDGKKGPET 823 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 + I YLP E + P P + + Sbjct: 824 N--SFLSMYDAGISGCPYLPELITDCVAEPGDLCRIR--------PKVPDGWTDTPLPTK 873 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 E + + A + + Sbjct: 874 EEEAAQSLTAAVRNRTPSAAEE-------------------------------------- 895 Query: 863 EIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQ 922 + R ++ A+ +R+ LP A E + Sbjct: 896 ----------AAMLRGTALHEVFE----GKPADAAVKRYG----LPPAAAEEFAAKYAAF 937 Query: 923 EMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWL 982 L E+ + G + G + ++ W + ++ L Sbjct: 938 LASPLMQNAAKS---ICEQEVAFSFEGTPLNGVIDRLVQYEDGSWMIIDYKTGRPSKMEL 994 Query: 983 EHLVYCASGGNGESRLFLRKDGEWRF 1008 E + ++ KD E Sbjct: 995 ERYESQLAVYFLWAKRLFGKDPEVCL 1020 >UniRef50_C5E0S5 ZYRO0G15224p n=1 Tax=Zygosaccharomyces rouxii RepID=C5E0S5_ZYGRO Length = 1161 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 77/666 (11%), Positives = 170/666 (25%), Gaps = 87/666 (13%) Query: 144 DW--LAQWETGHLVEGLGEAQAWQAP-----LWKALVEYTHQLGQPRWHRA-NLYQRFIE 195 DW + + E +V + E Q L + + + G W + L ++ IE Sbjct: 118 DWRIIDEKEIEVIVHNMVEKMPDQIRDYSLSLRRKVNLCLPKNGSDEWTVSPKLVKKQIE 177 Query: 196 TLESATTCPPGLP-SRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDP 254 ++S P ++ Y L L LL Sbjct: 178 RIKSYALLPEEYKGDNNHDSALAYFFENYQNELNRLNALDFDDLLMYT---------FRL 228 Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQ-----LFNSDGEQDVGNPLLASWGKLGR- 308 K L R R ++ + + S G VG+P + + Sbjct: 229 LTREKCLPRIRHVLVDEFQDTNGIQMDLMFLFARGNHHLSRGITVVGDPDQSIYAFRNAL 288 Query: 309 --DYIYLLSDLE-SSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKR 365 ++ + + + IL+ + R + Sbjct: 289 AYNFQEMFRRCPIECSSVVLVENYRSSQK-------ILDTSETLIRQQTEGRTDRLPLRA 341 Query: 366 PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV 425 D + + + + E + +L + + D ++V Sbjct: 342 QYDCIFAPVYL-NFPASFLEAPSIVREMLYLKSLPNLFSYDDFAILVRQRRQIKKI---- 396 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 +A + +PY I A + I+LL S ++A L P Sbjct: 397 -ETALIEHRVPYKILKGHAFWELKETTSMINLLKCVYSENEKNAMIAALQYPARGIGPAT 455 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 E + + + ++ + + + M+ Sbjct: 456 AERLRTIIESKDISPFDTLKRIREGRIKFDMIGKARSSLIDFVN-MIEACKKLREAPIDV 514 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 ++ + + + + R+ ++ L +L +FL Sbjct: 515 ALKEIFDKLYESSGMKQEYCYFDGKKKADRKPDSEPNYLNPRHRNVL-VLRDYFLGTNSG 573 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI--------------- 650 ++ + G + L+ + + I Sbjct: 574 NENGGVVTDSVDNTVVSGNNDKSDPMTNLNSVMEHFRNFFVSLTIYSNDTEESEEANAIK 633 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR---- 706 Q++ G V + T+ + + + VV + G +G+ P + Sbjct: 634 KQKYSEGLVTVSTIHGAKGLEWPVVFIPGCEEGIIPSLFGDGRSSNLEGDDDEDSENESD 693 Query: 707 -----------------------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS-ER 742 +++R +F A A+ LY+S + +D Sbjct: 694 EEQKSEKPVTDNNSTKKKTVVPDDSLNEERRMFFVAQTRAKHLLYLSSVT--DRDGRVPA 751 Query: 743 FPSVLV 748 PS + Sbjct: 752 VPSRFL 757 >UniRef50_A6NVW3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVW3_9BACE Length = 1206 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 76/884 (8%), Positives = 188/884 (21%), Gaps = 202/884 (22%) Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASWGKLGRDYIYLLSDL 317 + R ++ + + + + VG+ + + D L Sbjct: 385 QWSGRYDEIMVDEYQDTNAVQNAIFSAISQDGRNLFMVGDVKQSIYRFRLADPTIFLEKY 444 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN-------------- 363 + + + P ++ + + I S + Sbjct: 445 RTFTPYETAEEGEPRRII--LSKNFRSRAQVLEGANFIFRGIMSRSFGEMDYTADEALYP 502 Query: 364 -KRPLDPLDSSITFHVCH---------------SPQR--EVEVLHDRLLAMLEED----- 400 + D ++ +P+ E L R+ + + Sbjct: 503 GASYPEGADYAVELDALDLAAGGGDDEDESGEKTPRDLLEARFLAKRIKELKDGGFPVSD 562 Query: 401 -----PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 D++++V +S + A +R +P+ + + Sbjct: 563 GEGGTRPAGYGDMVILVRSPNSVLHH----YARALGERDIPWEADAGGDYFETTEVSVAL 618 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 SLL + D+ ++++L PV Sbjct: 619 SLLQIVDNPRQDVPLISVLRSPVYG----------------------------------- 643 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 F R+ + A + +++ E G+ L +L R Sbjct: 644 ----------FTADRLAVLRAASPDTDFYAALVKGAEEGGVDCAA------FLAELEDLR 687 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 + + + + + A + Sbjct: 688 FRSGDRNSHQLLWQIYDRTNLLGIFGAMDEGEKRQGNLLALCELARQFEAAGHKGLFGFL 747 Query: 636 LLRDELAQRLDQERISQRF-LAGPVNICTLMPMRSIPFKVVCLLGMND------------ 682 L + Q G V I ++ + + F +V L G+ Sbjct: 748 TYLTRLRDNGGKLAAPQAAREGGGVRILSIHKSKGLEFPIVLLSGLTRRLNRDDMQRPIL 807 Query: 683 -----GVYPRQ-----LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 GV P++ + ++ + ++ L A+ A++KL +S Sbjct: 808 FHPQLGVGPKRLDTERMIEYPTLARRAVARQLEYEMMAEELRLLYVAMTRAKEKLILSCA 867 Query: 733 GRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ 792 + L + Y + L+ +S + + Sbjct: 868 LTRGAAD-----------LRKLAEDAEYPADPQVLSGCQSVGQWVLLPVLTRPDAVAIRR 916 Query: 793 NYQPGER-------QSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPV 845 + W+ + + + V T W +P Sbjct: 917 AADYPLPIAAAELGPDWDIRWVDGSDLLQPPERKTAVLSENVEDKPVGDLTGVLTWKYPY 976 Query: 846 RA----------------FFQMRLQVNFRTEDSEIPDT------------------EPFI 871 F E + E F Sbjct: 977 AGDVEIPSKLTATQLKGRELDQEAGAEFPLPQGEPEEPAAVPAGKRSTLRRPRFAEEEFG 1036 Query: 872 LEGLSRYQINQQL-----LNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ- 925 L + + ++ + R A + + Q Sbjct: 1037 LTPAQKGTALHLVMQYIDFERAGTEEQVKEEIARLVAGAYITPEQGEAVNPAKIAAFFQS 1096 Query: 926 QLADRVIACRQPGQSMEIDL------------ACNGVQITGWLPQVQPDGLLRWRPSLLS 973 L ++ + + + V + G + Sbjct: 1097 PLGREMMESVSLRREFKFSILVPAADYCPGAGEGEQVLLQGVVDCCFETLEG-ITVVDFK 1155 Query: 974 VAQGMQLWLE--------HLVYCASGGNGESRLFLRKDGEWRFP 1009 + + ++ L + + + + W F Sbjct: 1156 TDRVTRRTIQERAEEYRPQLTAYSRALEEMTGRRVVRRALWFFA 1199 >UniRef50_A7VXH9 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXH9_9CLOT Length = 1179 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 76/874 (8%), Positives = 186/874 (21%), Gaps = 152/874 (17%) Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF-NSD 290 +H + LL W +D LA+ ++ + + Sbjct: 366 EHWALRLLVRQ-TEEGWRRTEDARLLAESFDE---VMVDEYQDTNEAQDMIFRAISREEK 421 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV 350 VG+ + + L S + D + N+ + Sbjct: 422 NLFMVGDVKQSIYRFRQAMPEIFLRRKASYPDYDPEKNEYSAK--VNLDRNFRSRHGVTD 479 Query: 351 AGVNI-----------------EEFSRSDNKRPLDPLDSSITFHVCHSPQR----EVEVL 389 + EE + + + D+ + E E + Sbjct: 480 GVNFVFRQLMSVEMGEMEYTGEEELTPGASYPEREEADTELHILTLPKGADMDTLEAEYI 539 Query: 390 HDRLLAMLEEDP---------TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 + +M+ RD V++ + + V+ + + +P Sbjct: 540 GSLIASMVRNGELVQDGGKQRPAAYRDFCVLIRN----ANAHGGVYAAKLREMGIPAWSD 595 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 P + +S L + D+ +L++L P+ + T + L +R Sbjct: 596 TAGTFFGTPEVSVALSYLRVLDNPVQDIPLLSVLISPI----WGFTPDDLAQIRM----- 646 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 + ++ E ++ Sbjct: 647 ------------------------------------ARKGDAFYFALKDAAERPDVLGAR 670 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 L +R ++ + Sbjct: 671 CHRFLEHTEAFRRLAATLPADRLIQRLYE---ATGYPAVAQAMRQGDLRLNNLRLLMKYA 727 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQER--ISQRFLAGPVNICTLMPMRSIPFKVVCLL 678 + G+ Y D L ++ + A V + ++ + + F + L Sbjct: 728 RDYEGSGYQGLSGFIRFIDRLQEQDSDLAPAAALSESANVVRVMSIHKSKGLEFPICILA 787 Query: 679 GMNDGVYPRQLA--------------------PLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 R+ +R ++ + Sbjct: 788 NTARQFNKRREDILLHPALGLGMKLRDETMTVQYDTMPREAVSLEIERGGMSEELRVLYV 847 Query: 719 ALISAQQKLYISYIGRSIQD---------NSERFPSVLVQELIDYIGQSHYLPGDEALNC 769 A+ A++KL + + S V AL Sbjct: 848 AMTRAKEKLVMLTSLDDPVKTLGKLGAQLTDSKAISPYVVRSAGSFSDWILSC---ALRH 904 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP 829 + + +E + ++ + + Sbjct: 905 PSGGGLREKAGVLPGVMLTEGENWKILLNPVREQQETVSGETEKRRQIQADPELTALLQK 964 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF---ILEGLSRYQINQ---Q 883 + + + P + E + + + R Q Sbjct: 965 RFSFVYPGEALKSVPAKVAASELAGKENAKEYAAMSRPAFLTGQTMTPAERGTALHLYMQ 1024 Query: 884 LLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ-LADRVIACRQPGQSME 942 + + + D E+ R G L + + + Q L R+ + + Sbjct: 1025 FADYRLAKQDPEKQLRFLLEKGFLTQEQAEAVSLKKIERFFQSGLYRRMEQSENLRREIR 1084 Query: 943 IDLAC---------------NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ------LW 981 + V + G + V + + + Sbjct: 1085 FTVELAASEVNPGLTGQNGREPVVLQGAVDCVFEENGGLILV-DYKTDYVKEEQELKNRY 1143 Query: 982 LEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQ 1015 L A + L + + + F A + Sbjct: 1144 CRQLSLYALALEQTTGLKVTEQYLYSFSLGEAVR 1177 >UniRef50_C8WFT5 Double-strand break repair protein AddB n=3 Tax=Zymomonas mobilis RepID=C8WFT5_ZYMMN Length = 993 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 110/921 (11%), Positives = 233/921 (25%), Gaps = 162/921 (17%) Query: 78 PEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQ 137 P E F + K+M + + + L L D+ ++++ A Sbjct: 95 AIPPLERHFRLTRLVKKVMQKQGRTIAVPEAHRLAEELALTLDQL----MAAEIA----- 145 Query: 138 YLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQ------ 191 P+ L Q E L + WQA L L+E + + Sbjct: 146 -----PEQLTQLIDPMAEEELA--RHWQASL--KLLECIITEWPEELKKTGQIESQERRN 196 Query: 192 RFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDI 251 R ++ L P + G PV + L+ + + ++ + Sbjct: 197 RLLDRLADRWQTQPPSEKPIIAAGAITGSPVSARLLRVISEMEGGLVVLPG-----LDNS 251 Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYI 311 L +R ++ L + +L Sbjct: 252 MSDEEWQLLGPHERDPDTGIKQPSLESHPQFQLKL------------------------- 286 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD 371 LL + ++ D + N + I + A + P Sbjct: 287 -LLDRMGVDRKEVIEWDPPKNYHPDNREQAIRHVMAPARYTDRWRSLPEKERAFP----- 340 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 +++ P+ E +V+ L A +EE ++ D + + Sbjct: 341 -NLSVIETAHPEEEAQVIALALRAAVEEKGQTA----ALVTPDRA-----LAIRVSALLK 390 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 + S R P + L+SL F + LA+ P++ Sbjct: 391 RFGIDADDSAGRPLSLTPPGLLLLDLVSLAADHFSAVSFLAIAKHPLV------------ 438 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 G + D++R L++ G G + Sbjct: 439 -------AFGEDRDLWRDHIRSLDMILRGP-------------LLRNGLAGITAKIKEAV 478 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 ++ EL+ + + PL + + + R+ N EAA L Sbjct: 479 DNQKADPELLAWWEKTKIPFQALDQQYQSVLPLTKIVKILRETANQIAGEKIWAEAAGHL 538 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PVNICTLMPMRSI 670 I + + + + S L Q +D++ + + I L+ R Sbjct: 539 AADLIAEIESLAA--DHNEDMRFSDFAHVLRQLMDKQAVRPMTGGHPRIFIWGLIEARLQ 596 Query: 671 PFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR--SRRDDDRYLFLEALISAQQKLY 728 ++ +N+ V+P + + + G R +++ A++ L Sbjct: 597 HADLMIAASLNETVWPPIKEADPWLAPRIRSELGLPGLELRIGIAAHDFSSVLGAKKIL- 655 Query: 729 ISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP 788 ++ R + + PS L Sbjct: 656 LTRARRDAR--APTMPSRFWLRLEAMAA-------------------------------- 681 Query: 789 FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAF 848 N + Y L P P+ + + + P + Sbjct: 682 ----NLHHADNLPYWARQLDEPKGFRPVTRPAPNPPVLDRPKRIAVTRFDSLQSDPYSYY 737 Query: 849 FQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE----RLFRRFRAA 904 L + P R + +L V++D++ + Sbjct: 738 ASNILGLRKLDPVDAEP-------TAAWRGSLIHSILENWVKEDNSRIGRLKPRALAFLE 790 Query: 905 GDLPYGAFGEIFWETQCQEMQQLADRVIACRQP-----GQSMEIDLACNGVQITGWLPQV 959 + ++ Q + + V E NG+++ G++ ++ Sbjct: 791 SINAHIIQKTLWLPRLLQAIDWIEGEVQKNAAEGRTILDVEREGRSQINGIELFGFVDRI 850 Query: 960 QPDGLLRWRPSLLSVAQGMQL 980 G Sbjct: 851 DRMGDGSLAIVDYKTGTPPSA 871 >UniRef50_C0QYG3 UvrD/REP helicase n=3 Tax=Brachyspira RepID=C0QYG3_BRAHW Length = 1131 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 111/1029 (10%), Positives = 260/1029 (25%), Gaps = 122/1029 (11%) Query: 11 DVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIW 70 + L++ + I+ + + + + Q+ Q L I ++ F Sbjct: 144 ETLKSEILNILRQSKHAEIIRTLYRISTEDSKNQFAQRILHFLLKIKPRLE--NINRFEE 201 Query: 71 DMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTL----LRHYLTDDSDKRKLFQ 126 ++ KE ++ + L+ L+ F + L D K + Sbjct: 202 KAL-EIIKIDDKEYDKLYNNIYNYSIELINDNLKSGKFIIECKNRISLLLQKIDLIKNIE 260 Query: 127 LSSKAADLFDQYL-VYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWH 185 + + +Y+ + D + +++ Y + L + Sbjct: 261 KVKELSSEDYEYMRIALSDVSNAKLGNTKHDEFRAVLEDLKQCTVSMLNYVNILYNEENY 320 Query: 186 RANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCR 245 +A I+ ++ + S + I + ++AL+ EI N Sbjct: 321 KA-----VIDFIKETYNHIEKVKSNIGIYSHEDMMYKAIEALENDAISKEI---RDNISS 372 Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGK 305 + +D + L +F E VG+ + + Sbjct: 373 LILDEAQDTSILQFDFINL----------IVFGQREITSNSKTDKKLMIVGDRKQSIYRF 422 Query: 306 LGRDYIYLL--SDLESSQELDAFVDVTPDNLLHNIQSD-ILELENRAVAGVNIEEFSRSD 362 D + S+ + +++L + +D +E Sbjct: 423 RNADVNAFTNTQENFSNYVRYLKDNYRSNSMLIDFFNDLFKSTVFVNDDINYKDEDDLDY 482 Query: 363 NKRPLDP-----------LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 NK+ + D +I + + E + + + +D ++ +++ Sbjct: 483 NKKTENKAVSLLIFNNNIEDENIHLYADDKTELEAYAIAEYIKNNYSDD----YKNTVIL 538 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 + ++ A +D +PY I S + + L R + Sbjct: 539 LQTFKRLDKYL-----QALSDYKIPYYIDGGNKFYSREEIVLIKTFLEYLILR-DHAKLP 592 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 +L + + L ++ ++ D ++ Sbjct: 593 EILRSELFDI-------DIGNLSDFLFSLYVKNLDIKDYFPKMVYDENKYKEIEDIAK-- 643 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 L + LN + E +C Sbjct: 644 -------------------------SKSYYNQLKTAKEILNNIESKIPMMNANEIIETIC 678 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 D +L ++ + I + + L D E S Sbjct: 679 IDTNFYNYLMTMNDAEISYANIEKLKKIANDFENQTGN---NIYDFVLNLKNTNDNEPYS 735 Query: 652 QRF--LAGPVNICTLMPMRSIPFKVVCLLGMNDGVY-----------------PRQLAPL 692 V I T+ + + F V + GM + + P + Sbjct: 736 AIPKLSVESVKIMTIHKSKGLEFNNVFVAGMGNYIRSYLSDFDFIEDSPFIRLPVRNKHY 795 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 D + +S + R L AL A L +S E + S L + Sbjct: 796 NIDFSASNTDDNKKSETSEKRRLLYVALTRASNNLILSG----EHSKGESYRSYLNKYFN 851 Query: 753 DYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 D I + Y E ++ ++ + S + Sbjct: 852 DEIKKYEYNIISEDTEGLIKIDDIENKFIDSYSYGLAIKPEEEINIIDSQTIKEKIKNIS 911 Query: 813 AGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL 872 + + + P L + + + + ++ +++ E L Sbjct: 912 KENKKVNYSEYIKNINPSLNKNNKLSKNYVNISDLLNRQISKLENDINNTDNEYNEDIEL 971 Query: 873 -EGLSRYQINQQLLNAL----VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 I ++L ++ L + E E+ ++L Sbjct: 972 ISYKDIGTIIHKMLEYFNFDKYIKEKEAYLEKVKSYTLKSNNHYSKEQLTESLNTAFKKL 1031 Query: 928 AD-----RVIACRQPGQSMEIDLAC--NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL 980 + ++ + S E ITG + + + + VA+ + Sbjct: 1032 FENNHIKNILNGNEEIVSREHTFQHYDGKDLITGKIDIITKNKNDEYYILDYKVAEESEY 1091 Query: 981 WLEHLVYCA 989 + Y Sbjct: 1092 NINKYQYQL 1100 >UniRef50_Q2IGD2 Putative uncharacterized protein n=3 Tax=Anaeromyxobacter RepID=Q2IGD2_ANADE Length = 1151 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 143/1111 (12%), Positives = 277/1111 (24%), Gaps = 137/1111 (12%) Query: 18 EFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQ--KFGIAANIDFPLPASFIWDMFVR 75 V P +LV S A L+ L++ + A F P + ++ Sbjct: 56 ADAVAALPAPGPLPARTVLVPSERHAHALRRELARTGRDAALAGTRFLGPLTAAIEVLQA 115 Query: 76 VL-PEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADL 134 P P E A + LP L H+ D + + + A Sbjct: 116 AGVPFTPGEGALRPARLLALFHEDLP----------LEHFDLDLLRTTRGWDEAF--AGA 163 Query: 135 FDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFI 194 D A + A A LW + + A +++ Sbjct: 164 I-------GDLEAAGLAPRDLPAEPAAARDLARLWSRVEDGAGTSFSS----ARIFREAA 212 Query: 195 ETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDP 254 L P + + A V + L+A+ + L D Sbjct: 213 ALLARDAGAWPFHGPTLALASGHADA-VEARFLRAI---PGVRLAVQT----------DR 258 Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLL 314 + L R R + L D ++ V P Sbjct: 259 PAGERHLERVERLFGAEARSALAARGSTGSPRAEEDRDRAVRTP---------------- 302 Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSI 374 + + +P + + D+L A A V + D ++ Sbjct: 303 ARGSTGSPRAGGPGSSPAGRVT--ERDLLATYLLADAAVLA-----DPARPRSGGPDGTV 355 Query: 375 TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + E+E + + E +I V+V D D + + P D Sbjct: 356 DLEEHAGVEAELEATALWVARQVLEAR-RPLEEIAVLVPDQDPLAGLVADRLARLPFDGG 414 Query: 435 -LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 LP ++ S ++++ S +E + +L L D L + Sbjct: 415 PLPVFVAGGLPAISTAAGARILAVVRALRSHLSAETLAPVLPALRLEGVVDGDRTHLTHG 474 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 G+ + L +G+ R G L + + + Sbjct: 475 EAMELAFGLGIVGGNPAHPAGALAWSGRAAARAGELEAALAQVHADDDSAERERWRLERT 534 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 G + + L L R + + PL V L L E A + Sbjct: 535 LGSLR----AIRPALDALVGVARAVVEGAPLAAIGDVLGGFLTRCLLAPGEGAALPARLV 590 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + A LG L ++ D+L L RF V + T+ + F Sbjct: 591 EALAPACAGSLGKALSGDDALQVVEDQL---LGLRVAQGRFGEPAVYVGTVAGAAGVSFG 647 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS-----RRDDDRYLFLEALIS-----A 723 V ++G+ +GV P Q + + + + RR +DR + A Sbjct: 648 AVRIVGLCEGVLPSQPREDPVVPGALREQLERGAPDRVLRRAEDRVAAQAHALVAAVRGA 707 Query: 724 QQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 + + +S + ++ + + A ++ Sbjct: 708 RDAVALSAPRVDLARTEREPGAIFID--AAAALARPHAATGAPAEAVPDGAALRRDAFRP 765 Query: 784 HTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHS------------------------- 818 ++ P S+ A + Sbjct: 766 AASAAARFRDAHPISDASWLDRVARTAPALPPEWTGTPVVDLARLAALRAPSGPLGPSDG 825 Query: 819 ------EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL 872 F + L + P + L + + + L Sbjct: 826 IFDRGGPFPPVPGIAPERPISASALGQLLQCPRLFLMRRILGWDEPASAPSLRE-----L 880 Query: 873 EGLSRYQINQQLLNALVEQDDAE------RLFRRFRAAGDLPYGAFGEIFWET-QCQEMQ 925 + LS + +++ + A RL R A + AF + E E Sbjct: 881 DPLSFGSLLHRVVELFYREHGAAFSRREGRLARWLELARGVADRAFDGLLSEYPLVGEGV 940 Query: 926 QLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL 985 +L +R + + D + G + Sbjct: 941 RLKERERLHDALREFLAYDWKGGPRRFVGVELPFGTPEAPLSVEADGETLHVHG-----Y 995 Query: 986 VYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAP-----LLVLPE 1040 + +G + + K G+ + + Y+ Sbjct: 996 IDRVDAEDGVTLVRDLKSGKAHPRAGSEAGPTALRDVQLGLYQLAARKLARRWGTPAKVH 1055 Query: 1041 SGGAWLKTCYDAQNDAMLDDDSTLQKARTKF 1071 A+ + + A D L++A ++ Sbjct: 1056 GAYAYASGRGEVEERAFRADAGALEQATAEW 1086 >UniRef50_A7NRM2 UvrD/REP helicase n=2 Tax=Roseiflexus RepID=A7NRM2_ROSCS Length = 1180 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 82/711 (11%), Positives = 174/711 (24%), Gaps = 63/711 (8%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIY 312 PA A L R ++ + + E L VG+ + + G Sbjct: 434 PAIAADLRRRYHYLLVDEFQDINYASGELIRLLDGGRGRVWAVGDAWQSIYRFRGASAAN 493 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL----- 367 L D F P+ + + + L+ AG + +RP Sbjct: 494 L----------DEFPRYYPNARIFYLTRNYRSLQPILDAGAAVMSGDPRAAERPPLVAQR 543 Query: 368 -DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 ++ Q E L +L + + + S Sbjct: 544 NGGGAHTVVEWAAPRSQDEYAALARDILRRVR-------------LRNRWLASGCAARC- 589 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD-- 484 ++ R + ++L + + + + D Sbjct: 590 --RMPRSGTMRRVARRPPLSTRQWRFGDHAILCRTHEQAGAVAAVLETHGIPVDYINDVF 647 Query: 485 --ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 + + V + + + E L + R A+ A Sbjct: 648 DTPGVKDALAVCAQVGATNSAGLLRALTMPEHRLDPADLNRLVDLARR--SQQALPRAAR 705 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 + Q + E++ + + L + L L R L Sbjct: 706 DPQIIACLSEAAQQTLARIRIIVEALEGEGDAWQVLTAY--LFRHSRAMRARLIHAAQGH 763 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAV--PLSLLRDELAQRLDQERISQRFLAGPVN 660 + + + Q A + L + R S V Sbjct: 764 IRAQRELAALGQLLAIARNFVRAAAPDECDASHFIDYIRALRAAGVRPRSSIGGQVDAVR 823 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + T+ + + F +V + G+ +G +P + G L + + S ++RYL A+ Sbjct: 824 VMTVHAAKGLEFPIVYVPGLQEGRFPVRGNQRGIPLPAGLIRGPIESEEQEERYLLYVAM 883 Query: 721 ISAQQKLYISYIGRSIQDNSERFPS----------------VLVQELIDYIGQSHYLPGD 764 A+ +L +S S ++ ++ + + Sbjct: 884 TRARDRLVLSRSLTCGDGAKSAERSSLLPGDGQGNGAPWRVRFIESAVNCPVPTPDMRLQ 943 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW---LPAASQAGKAHSEFV 821 + L R + + + R A + Sbjct: 944 DTPLPRMPLPASSIDLDGCKRRFLYQYVYQLYDDLSPFLRMHQTIRECAKILTEQARRDA 1003 Query: 822 QPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQ-VNFRTEDSEIPDTEPFILEGLSRYQI 880 P T+ LQR+ V + + + T E + R I Sbjct: 1004 LPADEAGLRTLVFGQLQRYELDSVLYADDYAAEALRHARTVWDDLRTGRLSPECVDRRVI 1063 Query: 881 NQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV 931 ++ + + D E + + G + + LA + Sbjct: 1064 VRRPAGTIEVRIDREDMQDGVTRWVWVRPGMPRNDDHLAERVMLYALARQE 1114 >UniRef50_Q043G6 ATP-dependent helicase/nuclease subunit A n=25 Tax=Lactobacillus RepID=ADDA_LACGA Length = 1204 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 80/828 (9%), Positives = 203/828 (24%), Gaps = 153/828 (18%) Query: 256 YLAKLLTRQRRHSFEDRELPLFRDSENAGQLF--NSDGEQDVGNPLLASWGKLGRDYIYL 313 + ++ + + + VG+ + +G Sbjct: 385 AQEYYQEKFNEILIDEYQDVNALQENIIKAIKKKGQNTLFMVGDVKQSIYGFRQARPDLF 444 Query: 314 LSDL------ESSQELDAFVDVTPDNLLHNIQSD----ILELENRAVAGVNIEEFSRSDN 363 LS S+++ + + +D IL + + + Sbjct: 445 LSKYHTYGKDNDSEKIILADNFRSTKRVTKTVNDLFNPILTTNFGGIDYKKEGQLQFGAS 504 Query: 364 KRPLDPLDSSITFH------------VCHSPQR--EVEVLHDRLLAMLEED--------- 400 P D +S EV+++ R+ + E+ Sbjct: 505 YYPSDLPTASEYIFTDKKQTQSAYEDQYGDEMDFSEVQMVIARIKQLKAENFQVWDRRTQ 564 Query: 401 --PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 L DI ++ + A LP ++D + L ++ L Sbjct: 565 LKRPLEYSDIAIITRTRSDNLQVM-----QEFAKADLPLFVTDAQNYFQTFELIMIMNYL 619 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 L D+ ++A++ P+ + L +R Sbjct: 620 RLIDNPQQDIPLVAVMRSPLFNFKEP----ELAQIRVKTPAGNFY--------------- 660 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + + + L L QL R Sbjct: 661 -----------------------------TALTSFASVNSSLGKKCKEFLQQLETLRSFA 691 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 A R E + + + + A + Sbjct: 692 ATHRISELIWSIYEKTHLLEIVTGLPNGQQRRVNLESLYERATSYESAGFKGLYQFISFI 751 Query: 639 DELAQRLDQERISQRFL--AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR--------- 687 + + + V + T+ + + F +V ++G+ R Sbjct: 752 ERMRKNQKDLAQPLLSDKADNAVKLMTIHASKGLEFPIVFVMGLGHQYQTRDLSGNFTIS 811 Query: 688 ----------QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ 737 + + + S + + +++ + L AQQKL + I+ Sbjct: 812 QNELGLTIKEKNYRIDSLVKSLADVQKRQQMLEEEARILYVGLTRAQQKLILVASVNEIE 871 Query: 738 DNSERFPS---------VLVQEL-----IDYIGQSHYLPGDEALNCDESEARVKAHLTCL 783 + +++ S LV+++ +D++G + + + ++ Sbjct: 872 NKRKKWVSELDQKKDIIPLVKKINAQSPLDFLGPKLEQKHEFDQTIRDMTSALEEQDKLY 931 Query: 784 HTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPL--ETLQRFW 841 + + D + + ++ ++E ++ K F P T +++ + Sbjct: 932 YLKFNLDLEPEKIKDQNEDSQEVNSNVNKVVKELYNFKYPFEDATKTTAYQSVSEIKKAF 991 Query: 842 AHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL-----EGLSRYQINQQLLNAL-----VEQ 891 P+ + ++ + D P L G +L +Q Sbjct: 992 NDPIDTELENSRLISSSNRYLQPIDETPTFLEGQKFTGAEIGTAMHLVLQYYNYEGNKDQ 1051 Query: 892 DDAERLFRRFRAAGDL-----PYGAFGEIFWETQCQEMQQLADRVIACRQPGQ------- 939 ++ ++ + G L P+ + + W ++ + + Q Sbjct: 1052 ENLDQEIDQLVELGKLNSLMVPHLSKEALNWFVMSDFAKEFWKQPDKLHRESQFSSLVNA 1111 Query: 940 ---SMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 + V + G + + E Sbjct: 1112 SELFNDFSDPSAKVLVHGTVDGYFEAKDGLIL-FDYKTDFVDKTNEEQ 1158 >UniRef50_C0WLM5 ATP-dependent deoxyribonuclease, subunit A n=3 Tax=Lactobacillus RepID=C0WLM5_LACBU Length = 1254 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 96/1014 (9%), Positives = 235/1014 (23%), Gaps = 217/1014 (21%) Query: 115 LTDDSDKRKLFQLSSKAADLFDQYLVYRPDW-LAQWETGHLVEGLGEAQAWQAPL-WKAL 172 L + + + FD + + E V L + Q W+ L Sbjct: 262 LQKGVIEAADWDGLRQLITGFDFESMTKAKLTKDADEHQKQVHKLVKGTNDQMKKQWQKL 321 Query: 173 VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGK 232 V + A Q ++ + +A L + V +A + L + Sbjct: 322 VTG---------YFAWNEQDNVDLMNAAKARIEKLVTVVRTF---RAAYKQAKARRHLMQ 369 Query: 233 HIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG- 291 I+I + K +L + ++ + ++ SD Sbjct: 370 FIDIEHAAYDILNDVSEQAKQ--VRQRLQDQYYEIMTDEYQDNNRLQDAILNKIARSDRG 427 Query: 292 -EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV 350 VG+ + + D + +++ DN L ++ + +N Sbjct: 428 NRFMVGDVKQSIYRFRLADPTMFIKKQAQ------YIEQDNDNELISLSENFRSAKNIDD 481 Query: 351 AGVNIEEF----------SRSDNKRPLDP--------LDSSITFHVCHSPQR-------- 384 + E +K D S+ + S Sbjct: 482 FTNLVFEQTMDHRVGDIAYTGKSKLQFGATYYPDDMKADVSLIIYRTKSSAAATSNEDLG 541 Query: 385 -----------EVEVLHDRLLAM-----------LEEDPTLTPRDIIVMVADIDSYSPFI 422 + E++ ++ + LEE +T DI ++ ++ Sbjct: 542 AGDQIEDSDSGQAEIIAQKIRTLVDDKQLIYDKKLEEMRPVTFDDIAIISPTHNN----- 596 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 + +P I+ ++ ++ +SLLS+ D+ F ++A+L P++ Sbjct: 597 ELTLSDIFTQYGIPAEITGAKSYFKTTEIQIMMSLLSIIDNPFQDIALVAVLHSPIV--- 653 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 G+D++ + L + + ++ L Sbjct: 654 ----------------------GLDENQLAFLRINRNTGNYYQAVLD------------- 678 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 + E + + + + QL ++ Q+ + + ++ Sbjct: 679 -FYRGFDRLEPNDYATRIYQKVDRFMKQLRRFKDVAQQDGLVSLIWDIYDQTGYLDYVGG 737 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL-DQERISQRFLAGPVNI 661 A+ + + +R D + V++ Sbjct: 738 MPAGLQRQTNLHALYDRAADYEKNGFKGLFQFVKFIQRMQERDNDLANANPTTSENTVHV 797 Query: 662 CTLMPMRSIPFKVVCLLGMN----------------------DGVYPRQLAPLGFDLMSQ 699 T+ + + F +V L + D + + Sbjct: 798 MTIHGSKGLQFPIVFLNDVGKQFNMQDTIGKYVLNDHWGIGIDYLNNQTREFRSPLQKQA 857 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 + ++ A+ A+Q+LY+ + + + L+Q + Sbjct: 858 ILDMTKNAGLSEEMRKLYVAMTRAEQRLYLVAKVKGEKSGDNQQ---LIQGWQGLTDANE 914 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTR-------------MPFDPQNYQPGERQSYAREW 806 + N +S H + DP + Sbjct: 915 LVLPAAVRNAAKSYLGWIGPAISRHPNVLDRFGDSIHSNVLAGDPTLFNLDFYDDERITK 974 Query: 807 LPAASQAGKAHSEFVQPLPFTLPETVPL----------------------------ETLQ 838 +A + TV ++ Sbjct: 975 ESGRQKANQTSPNDFIDQLAQKKLTVAQPTKAAISQVMTFKYPHTAATKTTAYQSVSEIK 1034 Query: 839 RFWAHP----VRAF--------FQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN 886 R + P + + + + E + +L Sbjct: 1035 RLFDDPDNTQLSGYSTLDVNKLAKTGRYLKTDFEVPQFISEGGGKPAPTEIGTATHLVLQ 1094 Query: 887 A-----LVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSM 941 + + E L + +I + + Q + + Sbjct: 1095 QIDLTTVPTIERIEALIANLLKQQVISPEVASQINVDEVLRFYQSEVGKYVLANPENTHR 1154 Query: 942 EIDLAC----------------NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ 979 E + + I G + + Sbjct: 1155 EAPFSLLMKARDVFKDFQDNDEQTILIHGIIDGYVATNEAVYL-FDYKTDHITP 1207 >UniRef50_A6WGC8 UvrD/REP helicase n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WGC8_KINRD Length = 1123 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 122/990 (12%), Positives = 230/990 (23%), Gaps = 180/990 (18%) Query: 99 LPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADL---FDQY---LVYRPDWLAQWETG 152 LP + + LR L + +L++ ++ F Q R D LA Sbjct: 203 LPPVEAGDVLAPLRAVLAAADRWPEGDKLTTHLREVVHPFAQAVSAATDRWDVLALLGDV 262 Query: 153 HLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVF 212 L G AWQ ++ L A L S V Sbjct: 263 KLSSSGGRKPAWQQA-------------------GLDKAEVVDALAHAQRAVEDLRSAVG 303 Query: 213 ICGISALPPVYLQALQALGKHIEIH-LLFTNPCRYYWGDIKDPA--YLAKLLTRQRRHSF 269 L L A L + D+ +L + Sbjct: 304 AATTKTLTARVQDWLLAEADRRRELGALSFHDLLVLARDLLRRNRDVRERLHAQWPVLLI 363 Query: 270 EDRELPLFRDSENAGQLFN----------------SDGEQDVGNPLLASWGKLGRDYIYL 313 ++ + E A L VG+ + + G D Sbjct: 364 DEFQDTDPLQVEIACLLAGDCGEEPPEQWQEIPVAPGRLFFVGDAKQSIYRFRGADVATF 423 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA------VAGVNIEEFSRSDNKRPL 367 + + + T + +LE N A ++ R Sbjct: 424 TAVGDLHE-----RGRTGLAVNFRSVPGVLEAANHAFRTLIGADPAAGIAYADLHPARDG 478 Query: 368 DPLDSSITFHVCHSPQR---------EVEVLHDRLLAMLEED------------------ 400 + + + E E + D + E Sbjct: 479 GADGVDVPVLLLGGDRDVPAGALRDLEAEHVADVIARAKAEGWPVEASTRHPDGTSTRGQ 538 Query: 401 PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 RD+ V++ + A R +PY + R S + A ++LL Sbjct: 539 RPAQYRDVTVLLPTRTPLASI-----ERALEGRDIPYRVESRSLVWSTDAVRAVLALLQA 593 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 DS +LA L P LA +W + + GID+ + L Sbjct: 594 VDSPADQVALLAALRQPGLACSDVDLVGWRAAGGRWSIHAAVPEGIDEQHPVAAALRT-- 651 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 L + + R + Sbjct: 652 -----------------------------------------------LRRWHEQRWWVPV 664 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 + +EE + R + ++ ++ + ++ + L+ Sbjct: 665 NQLVEEVVRELR------LVELTASQRRPRDHWRRLRFVVDQAREWCDRGGSGLTGFLSW 718 Query: 641 LAQRLDQ-----ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN-----------DGV 684 ++ E + V I T+ + + F V + G+N Sbjct: 719 TVRQQQDSADLVETVVPEPDDDAVRILTVHGSKGLEFPVTVVAGLNGSGRDDATVLWAPD 778 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDR---YLFLEALISAQQKLYI-SYIGRSIQDNS 740 P M + + + ++ L AL AQ L + Y S S Sbjct: 779 GPLVRFRADVLEMPGWRQASQDEKAESEQEAIRLLYVALTRAQDHLVVGCYHKPSRTGGS 838 Query: 741 ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 + EL+ G + A + A + ++ Sbjct: 839 RAQK---LWELLADSGLARCESEPRAQRAAQGTAPATPFQVLVPEDEGRTARDLPDRAEF 895 Query: 801 SYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTE 860 R L AA A A S +P + P + H E Sbjct: 896 LEQRAALLAALHAAVATSATAVRQATAVPTSGPSREEEPAKEHDAP-------DTTAGDE 948 Query: 861 DSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAA---GDLPYGAFGEIFW 917 P G + ++L + + RR A + + GE+ Sbjct: 949 AGVRPPRRTTRRRGAAVGTAVHRVLELADLRSPSREEVRRLAEAVCAAEQVPDSTGEVEQ 1008 Query: 918 ETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQG 977 + + + + + + + G++ + + Sbjct: 1009 RAWSALTAPVVRDAADGGRTWREVYLVVDDGQRYLEGYVDLLAETSTGELVVVDYKTDRV 1068 Query: 978 MQLWL-----EHLVYCASGGNGESRLFLRK 1002 +H L + Sbjct: 1069 RSAADVAAKEQHYAGQLDAYADALARVLGR 1098 >UniRef50_A5HYY0 ATP-dependent helicase/nuclease subunit A n=11 Tax=Clostridia RepID=ADDA_CLOBH Length = 1279 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 82/933 (8%), Positives = 211/933 (22%), Gaps = 175/933 (18%) Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 + + ++ + L + +PS + + V + Q Sbjct: 350 EAKKRERDLIDFNDIEHLCLSILTDKNSEGHIIPSDIALDYRKKFAEVLIDEYQDSNLVQ 409 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD 294 E+ + + + YW + E + + + Sbjct: 410 EVIMSMVSRVKGYWS-------------FYNGQLMFNEEEINLEEPQICLDIP---NRFM 453 Query: 295 VGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 VG+ + + L E + + + + + Sbjct: 454 VGDVKQSIYRFRQAKPEIFLDKYNEYSEEEGTKNRK-----VKLFKNFRSRKEVINGVNY 508 Query: 355 IEEFSRSDNK----------------RPLDPLDSSITFH--------------------- 377 + + S + I Sbjct: 509 LFKQIMSKTIGELDYTEEEALKVGASYGEEVKGEPIELCLMDKKYEISEEVLKEYNVDEE 568 Query: 378 -VCHSPQREVEVLHDRLLAMLEED---------------PTLTPRDIIVMVADIDSYSPF 421 + Q E ++ ++ ++ + L RDI++++ +++P Sbjct: 569 EALDNIQLEGRLVAKKIQKLVGNNLEGGLKVFDKKLGEYRNLQYRDIVILMRATSNWAP- 627 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 +F A +P ++ ISLL + D+ +L++L P+ Sbjct: 628 ---IFVEELAKEGIPVFADTNSGYFDTAEIKTMISLLQIIDNPLQDIPLLSVLRSPI--- 681 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 T++ L +R ++ +++ Sbjct: 682 -ASFTDDELIDIRMVNKNITFYECMEIIYRLYKNEKLDSYYSFY---------------- 724 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 + +L + S + +L +WR E + + + Sbjct: 725 -IEDENKINKIIKDMNEKLKNKICSFIEKLKLWREKSIHIDIDEFIWFLYVETGYYGYAG 783 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPV 659 + + + Y ++L ++ V Sbjct: 784 ALQAGEQRQANLRILFQRAKQYAKTSYKGLFNFINFINKLKFSSGDMGSAKILGENENVV 843 Query: 660 NICTLMPMRSIPFKVVCLLG---------MNDGVYPRQLAPLGFDLMSQKPKRGDR---- 706 I ++ + + F VV L G +N + + G D + + + Sbjct: 844 RIMSIHKSKGLEFPVVILSGTGKNFNMTDLNKNILFHRDLGYGPDYVDTERRIAYPSLVK 903 Query: 707 ---------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE--RFPSVLVQELIDYI 755 ++ + AL A++KL I+ + ++ E S ++ +Y Sbjct: 904 NIIKNKIRLETLSEEMRILYVALTRAREKLIITGLINNMDKTVEDWLNLSEDKNKVPEYA 963 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 S D + L + + + + Sbjct: 964 VMSGKTYLDWIGPALIKHKDAVSFREELKMTSELSNIVDDKSKWKIELWNKRELLKEKVE 1023 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQM-----------RLQVNFRTEDSEI 864 + + + + ++ V + E Sbjct: 1024 EDEVEISEKIKETLMNLEESNYKEEIYKRLSFKYKYDNASSIPTKLSVSDVKKQFILDEK 1083 Query: 865 PDTEPFI----------------LEGLSRYQINQQLLNAL-----VEQDDAERLFRRFRA 903 +TE + R I + L ++D + R Sbjct: 1084 ENTEELFKKLELRKPMFMEEKKKISPSERGTIIHLFMQHLDLKKAENEEDIKEQINRLIE 1143 Query: 904 AGDLPYGAFGEIFWETQCQEMQ-QLADRVIACRQPGQSMEIDLAC--------------- 947 + Y I + + +L R++ + M + Sbjct: 1144 REFITYEQSKVINPYKILKFCRGELGKRILNSNNVNKEMPFSIEIPALEIYKELDKEIYK 1203 Query: 948 -NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ 979 + I G + + Sbjct: 1204 DEKLIIQGVIDCYFEEEDGLVL-LDYKTDYVND 1235 >UniRef50_A0PR95 ATP-dependent DNA helicase n=32 Tax=Mycobacterium RepID=A0PR95_MYCUA Length = 1057 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 135/1030 (13%), Positives = 252/1030 (24%), Gaps = 155/1030 (15%) Query: 99 LPQLLEREDFTLLRHYLTDDSD-KRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEG 157 L + + + +LR D +L + + A + + G L +G Sbjct: 90 LVRSVHSYAYAVLRRAAERTGDAPPRLLTSAEQDA------------IIRELLAGDLEDG 137 Query: 158 LGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPS------RV 211 AW L AL A + + P L R Sbjct: 138 PSAGSAWPRHLLPALTT---------AGFATELRNLLARCAERGVDPMELERLGRRSGRP 188 Query: 212 FICGISALPPVYLQALQALGKHIEIHLLFTNPC--------RYYWGDIKDPAYLAKLLTR 263 Y Q + T P DP LA R Sbjct: 189 EWAAAGRFARQYEQVMLLRAAVGTATPQATAPALGVAELVGSALEAFASDPELLAAERAR 248 Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSDGEQDV-GNPLLASWGKLGRDYIYLLSDLESSQE 322 R +D + + + L + G+P A +G G + LL Sbjct: 249 LRFLLVDDAQQLDPQAARLVEVLAAGAEFALIAGDPNQAVFGFRGGEPAGLLGGPLDGGP 308 Query: 323 LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSP 382 + + + R G D S+T + + Sbjct: 309 AVTLT--MSHRCAPAVARAVSGIARRLPGGSAGRHIDG------TGTEDGSVTVRLAATA 360 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 E + D L D + + V+V + + + +A +P Sbjct: 361 HAEAAAIADALRRAHLVD-GVPWSQMAVIVRSVPRVAARLPRALAAAGVPVSIP---PIG 416 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 + P + A +++L+ ++ LAL+ P+ + R Sbjct: 417 GSLAEEPAVGALLTVLAATAEGLNADQALALITGPI---GRVDPVRLRQLRRTLRRAVAG 473 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 R D ++ L G+ + G + + + Sbjct: 474 RSPEDFGDLLVATLSEDGRPAVGSAGSNQPPGPQFGPLRRVRAVLAAATRCHRAGQDPRY 533 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 L + WL A T + A+ Sbjct: 534 IL----------WAAWHRSGLQNRWLAAIDRGGPAGVQA--------TRNLEAVTALFDI 575 Query: 623 GLGA-QYGDAVPLSLLRDELAQ-RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 LS L + +A +L + V + + + +V + G+ Sbjct: 576 TDQYVSRTSGASLSGLLEHVAALQLPRVSEEPVAQNEQVGVLSAHAALGHEWDLVVIAGL 635 Query: 681 NDGVYPRQLAPLGF-----DLMSQKPKRGDRSRRD----DDRYLFLEALISAQQKLYISY 731 DG +P + G L G+ S R ++R L L A+ A+++L ++ Sbjct: 636 QDGSWPNTIPRGGVLATQRLLDELDGVSGNASARAPLLAEERRLLLAAMGRARRQLLVTA 695 Query: 732 IGRSIQDN--SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV----KAHLTCLHT 785 + PS E+ + ++ + + Sbjct: 696 VDGDTSGGGQQAALPSEFFFEIAQWANGDSQAVAAPPVSAPRVLSAAAVVGRLRGVVCAP 755 Query: 786 RMPFDPQNYQPGERQSYA------REWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQR 839 D Q Q PA S T+ TLQ Sbjct: 756 DGAVDDAARQCAATQLARLAKAGVAGADPAGWHGLIPVSTTAALYGAGDVVTLTPSTLQT 815 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFR 899 P+R + N R + + L+ + + L Sbjct: 816 LNDCPLRWLAERHGGTNPRDLR-------------ATIGSVLHALIAE-PGASEEQLLAE 861 Query: 900 RFRAAGDLPYG--AFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGV------- 950 R LP+ F +Q + R + +++ +GV Sbjct: 862 LARVWKLLPFEADWFSSNELARHRAMIQAFVEWRGQTRSELTEVGVEIDIDGVLDAARDD 921 Query: 951 ----QITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEW 1006 ++ G + +++ DG R + A+ Sbjct: 922 GGAIRLRGRVDRLERDGAGRLVILDIKTAK------------------------------ 951 Query: 1007 RFPPLAAEQALH--YLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTL 1064 P++ + A L+ EGM + + A A D D Sbjct: 952 --TPVSKDDAQQNAQLAMYQLAVAEGMVEAGAEPGGARLVY-PGKSAAAGAAQRDQDPLT 1008 Query: 1065 QKARTKFLQA 1074 AR ++ Sbjct: 1009 PAARDQWRNL 1018 >UniRef50_B5CQ86 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQ86_9FIRM Length = 1256 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 83/884 (9%), Positives = 202/884 (22%), Gaps = 144/884 (16%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN----SDGEQDVGNPLLASWG 304 G I A + R ++ + + + VG+ + + Sbjct: 377 GKIVPSAVAEEYQERFAEVMVDEYQDSNLVQETILTSVSGMSKGRNNMFMVGDVKQSIYR 436 Query: 305 KLGRDYIYLLSDLE-------SSQELDAFVDVTPDNLLHNIQSDILE---------LENR 348 + + Q +D + + + + + E +E Sbjct: 437 FRLSRPELFMEKYDTYSVESSPCQRIDLHKNFRSRKEVLDSTNYLFEKLMFREFGGIEYD 496 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHS------PQREVEVLHDRLLAMLEED-- 400 A + + + + + + E ++ R+ M+ Sbjct: 497 ENAALYAGAEFPPIPEDAVFTDKTEVLIFNQQDMKARDAKEAEARMIARRIREMMGSGYI 556 Query: 401 --------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 + +DI+++ I ++ F + A+ +P R + Sbjct: 557 YDKGSDSFRKIQYKDIVILTRSIQGWA----ESFSAVLAEEGIPAYSVSREGYFETYEIS 612 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 + L + D+ + A+L P + E L +R + Sbjct: 613 VLLDYLRILDNARQDLPLTAVLTSPFVGL----DAEELAQIRLAYPNLPFYESVWL---- 664 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 + T G E + + + S + + LA Q+ Sbjct: 665 -----CGEEKTEETGADGSGETGEKEKKEKKKSDAEAENRSGEISEAVREKLAEFTRQVR 719 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 +R L+ + + + F+ + G Y Sbjct: 720 YFRSILSYTPIHDLLAKILEETGYRTFIAAMPGGEQRIANVEMLIEKACAFEGTSYKGLF 779 Query: 633 PLSLLRDELAQRLDQERIS--QRFLAGPVNICTLMPMRSIPFKVVCLLGMN--------- 681 ++L + + A V + ++ + + F +V + GM Sbjct: 780 NFVRYIEQLKKYNVDYGEAGIMDEQADTVRLMSIHKSKGLEFPIVFVAGMGKSFNMQDQR 839 Query: 682 -------------DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 D V Q L ++ ++ + + A++K+ Sbjct: 840 GSIVIHPDWGIGIDAVDLEQRTKNPTFLKRMIQEKTKLENLSEELRVLYVGMTRAKEKMI 899 Query: 729 ISYIGR-------------SIQDNSERFPS------------------VLVQELIDYIGQ 757 ++ + I E+ S ++ + + Sbjct: 900 LTGTAKLGEEELLALEMMEDIIKREEKQNSWKADEKDSLALYQMEGAKTCFDWILPALMR 959 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQ-PGERQSYAREWLPAASQAGKA 816 + + + + +SY EW S+ Sbjct: 960 DWKKAEKWIQVRLVTREELSYGAATAGQAEVLAREVLEHWDTEKSYMPEWKELLSEQMNY 1019 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF------ 870 ++Q L TV + + +R Q E +P F Sbjct: 1020 TYPYLQEEQMKLKFTVSELKKRIYAGEQMR-EMQEDGGEELYQEPEIVPLVPGFMQDQKE 1078 Query: 871 ILEGLSRYQINQQLLN-----ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 L G SR +L+ + + F + I ++ Sbjct: 1079 GLTGASRGTAYHKLMELLDFTRQYTEAALKNAVHDFEKKKKMTLEMAACIRISDILLFLE 1138 Query: 926 ----QLADRVIACRQPGQSMEIDLACNG------------------VQITGWLPQVQPDG 963 + + + L + + + G + + Sbjct: 1139 SSSGKRMSAAAGKGKLWREQPFVLGVDADQVYPGFSGEPGSQEKEVILVQGIIDAYFEEE 1198 Query: 964 LLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWR 1007 + Y A L + + Sbjct: 1199 DG-IVVLDYKTDKVKSAEQLKERYHAQLEYYAQALEGLLEKPVK 1241 >UniRef50_C0FWK5 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FWK5_9FIRM Length = 734 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 64/523 (12%), Positives = 141/523 (26%), Gaps = 89/523 (17%) Query: 267 HSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGR--DYIYLLSDLESSQEL 323 ++ + + E L + VG+P + G Y L + EL Sbjct: 219 IIVDEVQDSDEKQLELIDCLKKTQTCFFAVGDPNQVIYSWRGSAFHIFYQLKTKYQATEL 278 Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQ 383 V+ + + + ++ + + I + P Sbjct: 279 TLPVNYRSSSEILAVARCFMQ---------------QGGTLQGGRESGDKIQIRNMYDPF 323 Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 +E + L R+ + L R+I + + +F +P+ +S ++ Sbjct: 324 QEADYLAGRIRELHAS--GLPYREIAIFYRLQNQ-----SEIFEHVFEKEGIPFEVSLKK 376 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 + PVL+ I +L + + L G+ Sbjct: 377 TVKDIPVLDWLIKVLRFSVNPKDKSSG-------------------IAALADKKYGDGMS 417 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 + + L Q +L +S + +L + + Sbjct: 418 VKEAEKTINILSETRKTQT-------EILKSENAKSGSDICEKMLEFSKV---------- 460 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 +++ L E L + N A T + + +I Sbjct: 461 -------------YASKQVALPEDLWSYFSLENHLHPTTASYVEDRTYVMDFFTRMITYQ 507 Query: 624 LGAQYGDAVPLSLLRDELAQ-RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 Q S + + ++ + V + TL + + F V + G+N Sbjct: 508 KEQQKNVVEGFSEFLNMASLYGMNILKKEIHNENDTVKLMTLHASKGLEFSHVFITGVNY 567 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 G+ P Q + + LF + A++ L +SY Q + Sbjct: 568 GLIPLQTKSFEEEEEE--------------QRLFFVGITRAKEHLELSYYTSPGQYRAAP 613 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 PS ++ + + + + + + R H Sbjct: 614 GPSRYLRMIPGNLVEGQEKDRESSATHLQDLKRQILAERGEHR 656 >UniRef50_A5Z389 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z389_9FIRM Length = 609 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 56/511 (10%), Positives = 144/511 (28%), Gaps = 93/511 (18%) Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGK 305 Y ++ L + + ++ + L + + VG+ + +G Sbjct: 187 YLLLCENHTILEQWRELYKYILIDEFQDINRIQMNIIELLASPLNNIFVVGDDDQSIYGF 246 Query: 306 LGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE---NRAVAGVNIEEFSRSD 362 G + + F D P+ L + + + N A + + Sbjct: 247 RGA----------RPEIMIEFKDYYPEAELIVLDVNYRSTQSIINVAGRVIENNKTRLDK 296 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 + D + E++ + ++ E+ ++ ++ ++V + Sbjct: 297 CAHANNNKDFQPDIRKFRNQVEELKFVVSKIKEY--ENQGISLSEMAILVRNNSQIQEIS 354 Query: 423 QAVFGSAPADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 +R + R + V + +S + +F L + Sbjct: 355 S-----FLKNRKIEAESGKHRSNIYNGMVAKDILSYVRGAL-KFDGTYFNENLIYVLNKP 408 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 + I+ + + + ++ + ++ + + + + L+ + G E Sbjct: 409 QRYISRQVVLSVNMNISAVRRIYSKNNIDSFLFHIEMIRKLPPQAALSYIRKGAGYEEYL 468 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 + E ++ LL QL + ++ LE+W+ Sbjct: 469 RLY------------AIENNIPMSGLLKQLEQLVQECSKFNTLEQWINSI---------- 506 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 ++ Q ++ + +NI Sbjct: 507 -------------------DSAQNSEG--------------QNFGKKSSGEGGTNNRINI 533 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 T+ + + FK V ++ N G+ P A D ++ LF A+ Sbjct: 534 MTMHGSKGLEFKAVFIVDANQGIIPTSKALRERDFEEERR-------------LFYVAIT 580 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELI 752 A L I + + S+ V+E++ Sbjct: 581 RAIDYLNIYAVEERL--GCPIEVSMFVEEML 609 >UniRef50_A6CVP4 UvrD/REP helicase n=1 Tax=Vibrio shilonii AK1 RepID=A6CVP4_9VIBR Length = 690 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 50/542 (9%), Positives = 136/542 (25%), Gaps = 99/542 (18%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSE-NAGQLFNSDGEQDVGNPLLASWGKLGRDYIY 312 P K+ + ++ + + + G VG+ + +G Sbjct: 225 PEIANKVRAQFDFILVDEYQDTNLLQAGMLKAFFPDGRGLTVVGDDAQSIYGFRAASVDN 284 Query: 313 LLSDLESSQELDAFVDVT-PDNLLHNIQSDILE---LENRAVAGVNIEEFSRSDNKRPLD 368 +L F P + + ++ + + + +N + Sbjct: 285 ILE----------FPQQFSPPAKVIMLTTNYRSHQGILDLSNQLLNEGQEGYKVELHSER 334 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 ++ E + + +L + + + V+ + Sbjct: 335 KQGPKPQLVTVEDDAKQAEYIVESILR--AREEGIELKRQAVLFRS-----SYHSDRLEL 387 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 R +PY ++ +S+L D+ + + L I + Sbjct: 388 ELTRRDIPYVKHGGLKFLEAAHVKDLLSILRWADNPKHTISAFRV-----LKLLAGIGPK 442 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + + + + + ++ Sbjct: 443 TANNIIEHLKAHQYQ----------------------------------------FSALS 462 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 AE + SLL + Q L ++ Sbjct: 463 DCKVPFSARAEFKTLVESLLTINSNAVPWAEQLSLLATLYSPLLELNYDDHFVRWGDVEQ 522 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 + +I Q+ Q + + + + T+ + Sbjct: 523 LVMISGQYSTRERFLTELTLDPP-----------QSTGDLASNPKIDDDFLILSTVHSAK 571 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 ++ V +L + DG +P + GD+ +++R L A+ A+Q+L+ Sbjct: 572 GQEWQNVYVLNVADGNFPN------------EYAVGDKRALEEERRLLYVAMTRAKQELH 619 Query: 729 I-----SYIGRSIQDNSERF---PSVLVQE-LIDYIGQSHYLPGDEALNCDESEARVKAH 779 + ++ + S + + L +++ + HY + A+ Sbjct: 620 LMQPMKYWVPEQQSWGDKHVYGGKSRFMTDSLCEHLNRVHYPKIAPDAQDKKIAAKAITD 679 Query: 780 LT 781 + Sbjct: 680 IR 681 >UniRef50_B2KE90 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KE90_ELUMP Length = 1074 Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 79/785 (10%), Positives = 187/785 (23%), Gaps = 142/785 (18%) Query: 256 YLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG---------------EQDVGNPLL 300 + L + ++ + E L + VG+P Sbjct: 353 VRSALKKQFEIIFIDEFQDTDPVQGELLLFLAEEEKSAAKVWNEIKLAPGKLFVVGDPKQ 412 Query: 301 ASWGKLGRDY--IYLLSDLESSQEL---DAFVDVTPDNLLHNIQS----DILELENRAVA 351 + + G D L ++L Q + D + + + ++E A Sbjct: 413 SIYRFRGADITAYQLFTELILKQGGMICYLQTNFRSDAQIIDFVNCAGFKLIEERPGFQA 472 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR----EVEVLHDRLLA-----MLEEDPT 402 D I+ S + E + L Sbjct: 473 KYVPINAKDGAPCDKDAVKDVIISSEQPQSADDYRHNQAEFTAKWIAENAGKLKLSNGSV 532 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 L +DI V++ +++ +F A + Y + + + + + ++LLSL D Sbjct: 533 LQYKDIAVLMRTSNAF-----NIFTEALKRYGVKYTVEEDKNFYTAQEITDILNLLSLLD 587 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + + + +L P ++ + + + + I L + Sbjct: 588 NPYDKNALAGVLRSPFGG----FNDDEIYQIFKQ-KFTDISAKKLPKGFERLGGFYKTLN 642 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 T + + R+ G L+ ++ + Sbjct: 643 TLKGFVGRISTGA-------------------------------LVEKILSSTMFAELSQ 671 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 ++ L + + Q A+ PL+ + L+ Sbjct: 672 LAYNGEQTISNLQKFAALAAGDQNENANSLGQFLANSKDLARQARGEGESPLAD--EFLS 729 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM--NDGVYPRQLAPLGF-DLMSQ 699 V++ T+ + + F VV L M + V + + F D+ Sbjct: 730 ---------------AVSVMTIHKSKGLEFPVVFLADMFRQESVKQNKYSYSWFYDMHGL 774 Query: 700 KPKRGDRSRRD------------DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 + + ++ + AL A++KL+I + + P+ Sbjct: 775 RAGPYADANLAFLEVQQLWHSKSEEARILYVALTRAKEKLFILGNNTETK----KTPAR- 829 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 L + + E N + + N+ P + Sbjct: 830 --HLRNAGLWPELVTVKELPNDKLTHPLQLEYFPYAEPDQFIYKINFTPEDGGVL---KN 884 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 A + + +L + Sbjct: 885 AGEWFNRWAKRSEIYEKIKEEALFISPSSLNK------------------HEAVFAGSSD 926 Query: 868 EPFILEGLSRYQINQQLLN--ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 + ++L E+ + E + Sbjct: 927 -----NAALLGTLCHKMLENYDFKTVITPEQTAASAASLQIEDNDIIKEAAEIINNFTVS 981 Query: 926 QLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHL 985 ++ ++ + R + M G I+G + + + + L Sbjct: 982 EVCKKLASMRVLAREMPFTYFEEGKIISGTVDVI-VEQEGEIFVLDYKTDKTPDPSKYAL 1040 Query: 986 VYCAS 990 A Sbjct: 1041 QLGAY 1045 >UniRef50_C4G1J5 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G1J5_ABIDE Length = 1183 Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 70/801 (8%), Positives = 185/801 (23%), Gaps = 140/801 (17%) Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFNSDG----EQDVGNPLLASWGKLGR------D 309 + ++ + + + VG+ + + + Sbjct: 389 YKEQFAEIMIDEYQDSNLLQEKILTSISREADGQPNIFMVGDVKQSIYKFRQAKPELFIE 448 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL--------------ENRAVAGVNI 355 S + +D + + + + + E + Sbjct: 449 KYNKYSQRNKGKRIDLHSNFRSGPEVIDSVNAVFERTMTESLGGIVYDEAARLVKGRDDK 508 Query: 356 EEFSRSDNKRPLDPLDSSI--TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVA 413 + + + L + I + E ++ R+ ++ E L +I +++ Sbjct: 509 LQNELNKTEILLFDKSNEIPEELLKLSDIELEAYMVAGRIKRLMVEKEGLKYSNIAILLR 568 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 ++ F +P S ++ ISLL + D+ + + Sbjct: 569 TNVEWA----ESFRRILISEGIPAICESSVGYFSAWEVQVMISLLKILDNPHQDLPLGTV 624 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 L P+ G D+ + EL + + L Sbjct: 625 LLSPI-------------------------GGFDEQELAELRINSNKDEDLWTILNLSEN 659 Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD 593 +++ + N R L E + + Sbjct: 660 EKSLK----------------------------FINWFNEQRSKLIFTPVHELIKELYEE 691 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 ++ + V D+L + + Sbjct: 692 SNFYSYVRAMPSGETRAANLDMLVYKAKAYEATSLHGVVHFVRYIDKLRKYEVDFGEAGA 751 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR----------------------QLAP 691 A V I ++ + + + VV + GM + + Sbjct: 752 GGAEAVRILSIHKSKGLQYPVVFVSGMAKSMNNQDSRASMVIQAELGIGIDYFNIETREK 811 Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD-------NSERFP 744 L + ++ L A+ A+ KL ++ ++D + + + Sbjct: 812 KTTILKKMLAGKIRLENVAEEIRLLYVAMTRAEDKLLLTAGLEDVEDKLVSWEHDEQGYM 871 Query: 745 S-----VLVQ-----ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 S L+ + + + A +S+ A L + + + Sbjct: 872 SLSKANSLLDFAMPALIKEKNEGRLTIAVQCAKELVDSKMDEAAEKEVLESDITKLISSL 931 Query: 795 QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQ 854 + +E + E V+ + L+ + Sbjct: 932 PEPDGYEAIKEMISREKDYIYPFKEAVELKSKMTVSEIKRLHLEEEEIGEAVYNLPHKEA 991 Query: 855 VNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL--------------VEQDDAERLFRR 900 F + EP +G +R + +L+ + + + + ++ Sbjct: 992 PEFEPYIPDFMSKEPEETKGAARGTLYHSILSRMDFGNISGKETFKDYIAKLNIDKKITN 1051 Query: 901 FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ---SMEIDLACNGVQITGWLP 957 + + Q + + P EI+ V + G + Sbjct: 1052 EELSSIDLRHFAKFFESNLYKRMRQAFLNSKLYREAPFVIGIDREINTEKETVLVQGIID 1111 Query: 958 QVQPDGLLRWRPSLLSVAQGM 978 + + Sbjct: 1112 AWFTENE-DVILVDYKTDRVY 1131 >UniRef50_C8PM70 ATP-dependent DNA helicase, UvrD/Rep family n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PM70_9SPIO Length = 1167 Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 80/847 (9%), Positives = 185/847 (21%), Gaps = 174/847 (20%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN----------------SDGEQD 294 I DP + R ++ + + L D Sbjct: 350 ITDPDLRLFYKKQTHRIMIDEFQDNNSLQRDLLFLLAEKEARTDQSIPKPDELVPDKLFF 409 Query: 295 VGNPLLASWGKLGRDYIYL------LSDLESSQELDAFVDVT--PDNLLHNI-------- 338 VG+ + + G D L SS ++ + PD L Sbjct: 410 VGDEKQSIYAFRGADVSVFRMLSQDLRQGGSSASINLQTNYRTEPDLLNFFNTAFMQVFY 469 Query: 339 --------------QSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR 384 +++ + + +R + + + S + + Sbjct: 470 SEVNQPLTGGVPAFEAEFIPILSRDAVPNLMPQTDILFIDKKRFANPSDTDTVMFTPIEC 529 Query: 385 EVEVLHDRLL-----------AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 E L ++ L T D V++ + QAV+ Sbjct: 530 EAYTLAQKIADIHAERYLVYDEALHATRPCTWSDFAVLLR-----ASTHQAVYERFFRAF 584 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +PY ++ L +LL L L P + ++ L Sbjct: 585 KIPYISVQQKGLFHDAPLNDICALLRLAVYPNDRAVYAQTLRSPFVRL----SDRSFTRL 640 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + E + T Sbjct: 641 MLYSLEHEGQPFNPAAAEELEAEDRQYFLTACA--------------------------- 673 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 L ++ + + + + D + L + Sbjct: 674 -------------LFERIQGYIKKKSNAELITALW---YDEGYRYILLTEPRYHRYLELY 717 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDEL--AQRLDQERISQRFLAGPVNICTLMPMRSIP 671 A+ + A+ + + L + +R++ I V I T+ + + Sbjct: 718 DYLFALAVKADEAKQSLSAFIDTLISYIHAEERIEDMEIPLEHGGDAVKIMTVHKSKGLE 777 Query: 672 FKVVCLLGMNDG--------------------VYPRQLAPLGF--DLMSQKPKRGDRSRR 709 F +VC+ + P + + + + Sbjct: 778 FPIVCIPDCGNAGKSETKEGMVFLHKDLGPVIHLPPETKNDPSANIFFEELRQEANAKHL 837 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSERF--PSVLVQELIDYIGQSHYLPGDEAL 767 + + L A+ A+ +L +S + + D + P ++E+ + Q ++ Sbjct: 838 AETKRLLYVAVTRAKVRLVMSGVQETGCDAEDLPEFP-RGLEEIRQQLVQPQQE--EKNR 894 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT 827 + + + P + + R+ + P Sbjct: 895 SFFQLLLPAVSDDIAGLHFAEVLPLPASTVQHTAEDRQRFNLDETRALYRQAAEKNFPLA 954 Query: 828 LPETVPLETLQ------RFWAHPV----------RAFFQMRLQVNF-----RTEDSEIPD 866 P +P + R P+ + + + + Sbjct: 955 EPRVIPATQFEKDTQWLRLSEAPLPSTEHTEKEIAFSADAISATDAASTAKPVDGNIGAE 1014 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 L + + + A LP E+ Sbjct: 1015 QGEDELSSTEFGTLVHKAMEARFLDRP-----------CILPAKYAREVEKLCAAFLSSP 1063 Query: 927 LADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ---GMQLWLE 983 + G I G + + + Q + + Sbjct: 1064 FGQKAAEASFRKTEYGFLTLYEGKLIIGQIDLLFEYEDTAY-IIDYKTDQKIYPEKHRKQ 1122 Query: 984 HLVYCAS 990 L+Y + Sbjct: 1123 LLIYKTA 1129 >UniRef50_B5E4P4 ATP-dependent helicase/deoxyribonuclease subunit B n=32 Tax=Streptococcus RepID=ADDB_STRP4 Length = 1091 Score = 147 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 88/778 (11%), Positives = 225/778 (28%), Gaps = 108/778 (13%) Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 ++A + + ++ C + + E+E++ + L E+ L+ + Sbjct: 269 DKASRLLESSYDFSELALDVDEKDRENLQIWSCLTQKEELELVARSIRQKLHENSDLSYK 328 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 +++ D+ SY ++ +F +P+ + A HP+ + S+L+L RF Sbjct: 329 HFRILLGDVASYQLSLKTIFDQY----QIPFYLGRSEAMAHHPLTQFVESILALKRYRFR 384 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 ED++ LL + + +++ +G + + T H +F Sbjct: 385 QEDLINLLRTDLYTDLSQSDIDAFEQYIRYLGING---------LPAFQQIFTKSHHGKF 435 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 L R+ + L A +LL + +++ + A + L++ Sbjct: 436 NLERLN-----------VLRLRILAPLETLFASRKQKAENLLQKWSVFLKEGAVTKQLQD 484 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 + + + + + ++ + G V L L + Sbjct: 485 LTTTLEAV----------EQERQAEVWKAFCHVLEQFATVFAGSQVSLEDFLALLHSGMS 534 Query: 647 QERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 + V + + + + V +G+ P+ ++ Sbjct: 535 LSQYRTIPATVDTVLVQSYDLIAPLTADFVYAIGLTQDNLPKISQNTSLLTDEERQNLNQ 594 Query: 706 R------------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 +RY L + SA+++L++S S+ + SE S +QELI Sbjct: 595 ATEEGVQLLIASSENLKKNRYTMLSLVNSARKQLFLSAP--SLFNESESKESAYLQELIH 652 Query: 754 Y-IGQSHYLPGDEALNCDE--SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 + + + L+ ++ S + + L H + + +R Sbjct: 653 FGFRRREKRMNHKGLSKEDMGSYHSLLSSLVAYHQQGEMSDTEQDLTFVKVLSRVIGKKL 712 Query: 811 SQAGKAHSEFVQPL--------------PFTLPETVPLETLQRFWAHPVRAFFQMRLQVN 856 G + P + L F+ + F + L + Sbjct: 713 DLQGLENPAIPTSPSSKTLAKDTLQALYPAKQEFYLSTSGLTEFYRNEYSYFLRYVLGLQ 772 Query: 857 FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVE-------QDDAERLFRRFRAAGDLPY 909 + S ++ ++ E+ + + Sbjct: 773 EELR---------LRPDARSHGNFLHRIFERALQLPNEDSFDQRLEQAIQETSQEREFEA 823 Query: 910 GAFGEIFWETQCQEMQQLAD---RVIACRQPGQSMEIDLACNG-------------VQIT 953 + + + + +A ++ ++++ + G V + Sbjct: 824 IYQESLEAQFTKEVLLDVARTTGHILRHNPAIETIKEEANFGGKDQAFIQLDNGRSVFVR 883 Query: 954 GWLPQVQPDG-LLRWRPSLLSVAQGMQLWL--------EHLVYCASGGNGESRLFLRKDG 1004 G + ++ + + + Y A+ + F Sbjct: 884 GKVDRIDRLKANGAIGVVDYKSSLTQFQFPHFFNGLNSQLPTYLAALKREGEQNFFGAMY 943 Query: 1005 EWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDS 1062 P+ + A+ L+ + + M + E ++L Y+ L D+ Sbjct: 944 LEMAEPVQSLMAVKSLAGAVVEASKSMKY-QGLFLEKESSYLGEFYNKNKANQLTDEE 1000 >UniRef50_UPI000169433B UvrD/REP helicase n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169433B Length = 608 Score = 147 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 58/541 (10%), Positives = 147/541 (27%), Gaps = 78/541 (14%) Query: 326 FVDVTPDNLLHNIQSDILE---LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSP 382 F P + + + + A ++ E R ++ + + Sbjct: 2 FEQQYPAARVITLDVNYRSGSSILGLANEVISHNEERRPKTLYTGIREKGTVQYLSPLTT 61 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 E E + + + + + DI ++ + + +A F + +P+ Sbjct: 62 DHEAEAILEHIKQQVGKGK-RKYGDIAILHRT----ASYSRAFFERLLME-DIPFVQYGN 115 Query: 443 RA-RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 H ++ ++ L L + + +L +A W+ E Sbjct: 116 SDLFYRHWLIRPVLNHLRLALNSRDMKACEGVLLTLYIAK---------EKGASWIREKE 166 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 + + ++ P ++ + R+ Sbjct: 167 KKKAKKWPLIHLMDHPDLKENQKEKLMERL------------------------------ 196 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 ++ + E + + D + P+ +T+ + + ++ Sbjct: 197 --------KMIKSLQAFKPEEAIRQIRIKFYDAFIDAYDPEPDTQYK-----ETLKEMLD 243 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQ----ERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 E L + + D+ E + + + + + T+ + + F VV L Sbjct: 244 EL-ETSARRFTGLEEFLGFVDRITDKYMVMESLKKEDESDALKLMTIHRSKGLEFPVVYL 302 Query: 678 LGMNDGVYPRQLA--PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 +G+++ V P + G + + G + +++R L A+ A+++LYIS G Sbjct: 303 IGVSERVLPHSTSLKKEGCKDNRFEGEHGAAAALEEERRLAYVAVTRAKEELYISSPGY- 361 Query: 736 IQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ--- 792 + S + + + + + D + Sbjct: 362 -YRGKQAHVSRFILQPFESRRSRVSNTAQPVPASAAKKPSAIQDRSMPEMGNASDKKTVR 420 Query: 793 ---NYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 S E Q TV L R V ++ Sbjct: 421 TQVYTAGYGTNSSQPERKARHDQPKLVSPAASVTSLSVYTHTVTKS-LDRQPVSAVDSYL 479 Query: 850 Q 850 + Sbjct: 480 K 480 >UniRef50_D1PLS4 Putative ATP-dependent nuclease subunit B n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLS4_9FIRM Length = 1094 Score = 147 bits (369), Expect = 4e-33, Method: Composition-based stats. Identities = 100/789 (12%), Positives = 216/789 (27%), Gaps = 87/789 (11%) Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNK-RPLDPLDSSITFHVCHSPQREVEVLHDRL 393 + D + +A +N+ + R +DP +I + S R+ E Sbjct: 243 TETLTDDPRHADTPVLAELNLLLADPTYTPDRTVDPDQPAIVCYGAAS--RQAEAKAVAA 300 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 + + V+ D Y ++ F + +P + ++ A Sbjct: 301 EIAARARAGMPYHRMAVICRDAAQYLGPLRYEF----RLQNIPLFCDEATTPENTAPARA 356 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 ++L L S S VL LL ++ E L + ++ Sbjct: 357 VHAVLDLARSGVSSRTVLRLLKTGLVNL----PERQQTALENYAYTWSLKAADWRAPFTR 412 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 TR A Q LP +++G A L Q+ + Sbjct: 413 SAAGYADVERAEDVRTREEAEAARVFLMERIQKFLPRVKNAGAAA--------LTKQVYL 464 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 + + L E L R + ++ + + +P Sbjct: 465 FLQSLGAEDTLNALAETLR------GQGRMPEADEVLREWNVVMGLLNQLAQLLGEEELP 518 Query: 634 LSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 + + L + + V + T MR V ++G+ +G +P+ Sbjct: 519 PADYAELFTLLLRTTDMGHIPQSLDSVILTTAGRMRLPETDAVFVVGLLEGEFPKTPGDQ 578 Query: 693 GFDLMSQKPKRGD---------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF 743 G + + ++ + F +A+ +A+ L++S+ G + ++ Sbjct: 579 GLLTHADRDAMIRQGAELPDCFENKVLREGVCFYKAMTAARSFLWLSWPGAAHAEDDT-P 637 Query: 744 PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA 803 S + + + P L + A + + + + + Sbjct: 638 ASSALAPVRRLLQVPFAGPSTAELGASPAAALDILGVISQQPGREGEGEALRAALEDAEG 697 Query: 804 REWLPAASQAGKAHSEFVQPLPFT---------LPETVPLETLQRFWAHPVRAFFQMRLQ 854 +A + E +P V +++ P F Q L+ Sbjct: 698 TPQSAPGYEAVRRAREKAEPAVRDTGALEKLLGPGLRVSPTRFEKYQTCPFGYFMQFVLR 757 Query: 855 VNFRTEDSEIPD-TEPFILEGLS-----RYQINQQLLNALVEQDDAERLFRRFRAAG--- 905 R + P+ + L + + L ++ E + +A Sbjct: 758 AAPRQKAELAPNISGTLTHWVLENALRRQGAAFKDLTAEELQALVEELVAEYTQANLPGI 817 Query: 906 DLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG---------------- 949 + E + + + + E+ + Sbjct: 818 TVRMQYLIERIRRNLVGLLGFIQRDLQQSGFQPVAFELRIDDRPGEDPEAPRIDPVELKD 877 Query: 950 -----VQITGWLPQVQPDGLL---RWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLR 1001 V+I G + +V L R + + VYC LF Sbjct: 878 GAGHTVRIVGTVDRVDAMPLGERTYLRVVDYKTG--GKDFQLKEVYCGLDCQMLLYLFTL 935 Query: 1002 KDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDD 1061 + P A + YL L + E + E+G + + + +L DD Sbjct: 936 ERNAGNKFPGATAAGVEYL--LADPAPESIPR-----SEAGQDAAEAENNYPLNGLLLDD 988 Query: 1062 STLQKARTK 1070 ++ +A + Sbjct: 989 ESVYQAMDR 997 >UniRef50_A6BJ96 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A6BJ96_9FIRM Length = 1221 Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats. Identities = 94/965 (9%), Positives = 213/965 (22%), Gaps = 200/965 (20%) Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 + LVE A+L + F E E + S + L+ L Sbjct: 322 EELVEDLRVCTPAMEELADLVRLFAERFEEQKRAQNMI-------DFSDMEQYALRILTQ 374 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 ++ + + + ++ + + Sbjct: 375 KTENGFVP----------------SKIAEEYQKQFEEIMIDEYQDSNLIQEAILTSVSGC 418 Query: 290 DG----EQDVGNPLLASWGKLGRDYIYLLSDL-------ESSQELDAFVDVTPDNLLHNI 338 VG+ + + L +Q +D + + Sbjct: 419 RSGRYNIFMVGDVKQSIYRFRLSRPELFLEKFRTYNIEESKTQRIDLHKNFRSRKEVLES 478 Query: 339 QSDI-LELENRAVAGVNIEEFSRSDNKRPLDPLDS-SITFHVCHSPQR------------ 384 + I ++ + G+ ++ + D+ V S Sbjct: 479 ANAIFRQIMTEKLGGIVYDDQAALYPGAEYPENDNVKTEILVMDSDLEILSKEEDFEEKI 538 Query: 385 ------EVEVLHDRLLAMLEEDP----------TLTPRDIIVMVADIDSYSPFIQAVFGS 428 E ++ R+ +L + DI+++ I ++ VF Sbjct: 539 PSERELEARMIAMRIRELLRSQKVTDKETGELRNVRYSDIVILTRSIKGFAD----VFTE 594 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 +P + + L + D+R + A+L Sbjct: 595 VLNREGIPTYAGTSEGYFQTQEIGVLMDYLRVLDNRRQDIPLTAVLSSAFAGLS------ 648 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L + + Sbjct: 649 ----------------------------------------QEELAEIRCAYPDTAFFESV 668 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 G A++ L L Q++ +R+ + E + ++ A Sbjct: 669 TKYREQGENADIQLKLQKCLDQMDDFRKIVPYTPMHELLWKILETTGYGDYVASMPGGAQ 728 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL--AGPVNICTLMP 666 Y ++L + + A V + T+ Sbjct: 729 RKANLDMLIEKARAYESTSYKGLFHFVRYIEQLQKYDVDYGEASIEDEHADTVRVMTIHK 788 Query: 667 MRSIPFKVVCLLGMN----------------------DGVYPRQLAPLGFDLMSQKPKRG 704 + + F VV + GM D V + + K Sbjct: 789 SKGLEFPVVIVAGMGKRFNMQDARSAVALHAGMGVGLDAVNLEYRTKIPSIIKKVIQKEE 848 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD----------NSERFPSVL-----VQ 749 ++ + AL A++KL I+ + +D N + S L V Sbjct: 849 ALESLGEELRVLYVALTRAKEKLIITGTLSNPEDKISDGRVFQGNKRKELSFLQLSHAVT 908 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQS-YAREWLP 808 + G+ V + + + Y + Sbjct: 909 YWDFILPAVLRTEGEPLKLQILHVEDVVKESIEEEEKSGISRAVLENWDVNEIYEPKLHD 968 Query: 809 AASQAGKAHSEFVQPLPFTLPETVPLETLQRF------WAHPVRAFFQMRLQVNFRTEDS 862 + + + + L TV + + ++ + Sbjct: 969 MMKEQFEFIYPYEKSSMRKLKFTVTELKKRAYEIGLDGGEEEREEEGELLQEEPEVVPMI 1028 Query: 863 EIPDTEPFILEGLSRYQINQQLLNALVEQDDAE-----------------RLFRRFRAAG 905 E +L G +R +++ L + E G Sbjct: 1029 PQFLQEDEVLAGAARGTAYHRVMELLDMKGMPEFTEDTAGEKENWKKYFMDWLDDQVRRG 1088 Query: 906 DLPYGAFGEIFWETQCQEMQQ-LADRVIACRQP---GQSMEIDLACNGVQI--------- 952 + A I WE Q + + R+ + L + ++ Sbjct: 1089 RIEEDAARCICWEDILQFAKSGIGRRLREADGKQRLWREQPFVLGIDARELYPEEEDGEL 1148 Query: 953 ---TGWLPQVQPDGLLRWRPSLLSVAQGM------QLWLEHLVYCASGGNGESRLFLRKD 1003 G + + + + + E L Y A + +++ Sbjct: 1149 ILVQGIIDAYFEEPDGLV-VLDYKTDKVRRKEELAERYQEQLRYYAKALEQMTGKKVKEK 1207 Query: 1004 GEWRF 1008 + F Sbjct: 1208 IIYSF 1212 >UniRef50_C7NJY8 DNA/RNA helicase, superfamily I n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NJY8_KYTSD Length = 1083 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 98/816 (12%), Positives = 193/816 (23%), Gaps = 105/816 (12%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPL---FRDSENAGQLFNSDGEQDVGNPLLASWGKLG 307 + D R + +D + + + G+P A G G Sbjct: 221 VVDDEVAEDAAGRLQLVLVDDAQELTAGTLALMDALARRTPRARWVLAGDPDAAVQGFRG 280 Query: 308 RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 L L + I E + +E Sbjct: 281 ARPGAFLEWARDGVSEVLPCSHRHGPALRAVAGRIAE----RIGAHGVEHRRPGPRADGE 336 Query: 368 DPLDSSITFHVCHS---------PQREVEVLH-----------DRLLAMLEEDPTLTPRD 407 + E L +L + Sbjct: 337 GSGGPGVAPSEAGDGPGVAGGSVRPEEAAALVFPSVHAELSHVSTVLRREHVLAGVPWGR 396 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR-RARQSHPVLEAFISLLSLPDSRFV 466 + V+ A +P +S + PV+ + L+ Sbjct: 397 MAVVARGRGR-----TEQVRRALERAGVPVQVSGGGQPVTGQPVVATLLDLVVAALD--- 448 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 LA L A + + + R + G+D +VR L + Sbjct: 449 ----LARLRPGAFAGQGAGSAAVVDQERITGWLTSPVGGLDQTSVRRLRRVLRAEAGAPT 504 Query: 527 GLTR-MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL---NIWRRGLAQER 582 G+T LL A+ W+ + +A + + + W G+ E Sbjct: 505 GVTSGELLEQAVLDPAHPWERRGAETGALRRLATALHAGVAAARRTPDGRGWALGVDAET 564 Query: 583 PLEEWLPVC---RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 L A ++ A + + D Sbjct: 565 VLWAVWDGLGLASGWQRQALAGGVAGRRADRELDAVLGLFAAAEQFVERRPGAGPDVFVD 624 Query: 640 ELAQ-RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF---- 694 + ++ ++ + V + T ++VV ++G+ GV+P Sbjct: 625 WMRSSQVARDSLVLGRQRDAVQVLTPQTAAGHEWEVVSVVGVQAGVWPDLRLRGSLVGSS 684 Query: 695 ---DLMSQKPKRGDRSR---RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 DL+ + R D+ FL A A + L ++ + ++E PS L+ Sbjct: 685 RLVDLVEGRAATVADELASVRHDETRQFLVACTRATRCLLVTAVR-----DTEESPSALL 739 Query: 749 Q---ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH----------------TRMPF 789 L D + + P + L+ A + L Sbjct: 740 NLVEPLPDGAEERPWAPWEPPLDLRHQVALARRELLAAAGADTGEDSAPGEHRIDPGARA 799 Query: 790 DPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 +S P A + + P P +V L + +R F Sbjct: 800 AWAAELAALVRSEVPRAHPEQWWALRQVTSARAPWPADTVPSVRPSALGTYQDCALRWFL 859 Query: 850 QMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDL-- 907 + LL E R +L Sbjct: 860 STHGGSTPPGRSQ-------------ELGILLHDLLAERPEDPVPALAAEAERRWAELGS 906 Query: 908 PYGAFGEIFWETQCQEMQQL--ADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDG-L 964 P + E + +++ R G + + + GV++ G + +++ Sbjct: 907 PEVWWSRRERERMAEWLRRYEIYRRESGRELVGTELPLAVEAEGVRLAGRVDRLERHPSS 966 Query: 965 LRWRPSLLSVA-----QGMQLWLEHLVYCASGGNGE 995 + L + + Y + G Sbjct: 967 GALHVADLKTGFVGPPSELPGNPQLGAYQVAVAAGA 1002 >UniRef50_A0JYL6 UvrD/REP helicase n=3 Tax=cellular organisms RepID=A0JYL6_ARTS2 Length = 1150 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 127/936 (13%), Positives = 243/936 (25%), Gaps = 150/936 (16%) Query: 145 WLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCP 204 + + GH + GL W L AL + L+ R IE+ + Sbjct: 172 IIKELLEGHTLPGLE--LPWPDDLGAALETRGFRQEVR-----QLFDRIIESGRTPADLV 224 Query: 205 PGLPS--RVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLT 262 R +AL Y L R + D P +LA Sbjct: 225 ALAQQCNRPDWIAAAALYAEYRDVLDLRMPEAFDPAGIITAARQIFQD--APEFLAAERE 282 Query: 263 RQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR------DYIYLLSD 316 R + +D + E + +P G G + +LL+ Sbjct: 283 RLQLILVDDIQEANPAVFELLADIAAGKDAYVAFSPDTVVQGFRGARPDLTAELPHLLAP 342 Query: 317 LESSQELDAFVDVTPDNLLHN-----------IQSDILELENRAVAGVNIEEFSRSDNKR 365 +++ P L + L + R + R ++ Sbjct: 343 ADATGRSPR-DAAAPGTALERPLWRTHRHTPAVAQAWLSVAGRISQRAGSQSARRLESAE 401 Query: 366 PLDPLDSS--------ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 P S + H+ SP +E+ + R+L D DI V+V + Sbjct: 402 PPSNRPESGAVPACGGVEGHILPSPVQELRYVAQRILDAHLNDR-RELGDIAVIVRNGGQ 460 Query: 418 YSPFIQAVFGSAPADRYLPYAIS-DRRARQSHPVLEAFISLLSLPDSR--FVSEDVLALL 474 A +P + A + + + ++ E +ALL Sbjct: 461 L-----NQLQRHLAGHGIPVRVPVAESAVRDEVAVRPLLDAYAVALDPAVLTPEAAVALL 515 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + A + LR+ G D V L P T + G Sbjct: 516 TSRIGGATSIELRRLRQSLRREEILGGGGRTSDALLVESLLEPGALATTG-------IEG 568 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 + ++ + G AE L L Sbjct: 569 RSARRVARMIEAGREAARAPGANAET-------------VLWALWNSTGLAARWTDAALA 615 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL--AQRLDQERISQ 652 A AM + + + + G+ + L + ++ Sbjct: 616 GGAAGARADRDLDAMMALFHTAERYVDQLPGSGPDQ------FLEYLLSQELPMDTLAAR 669 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD---LMSQKPKRG----- 704 L V + T + VV + G+ +GV+P L + + G Sbjct: 670 AQLEDAVELMTPASAAGREWPVVIIAGLQEGVWPNTRLRGELLGSTLFADAVEHGVDHAL 729 Query: 705 -------DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG- 756 R R D+ F A+ A++ L + + + PS + + Sbjct: 730 QLGPISRLREIRYDELRSFSTAVSRARELLICTAVSSEDE-----QPSSFLDYVAPLHPG 784 Query: 757 --QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG 814 + + P + + A ++ H + + R + A +P A Sbjct: 785 QDRRTFTPVERPMTLRALVAELRQHAQLDGRFAAESVEAARVLARLAAAEPSVPGAHPDS 844 Query: 815 K----AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF 870 A S + +P V ++ P+ F Q Sbjct: 845 WWGLAALSSEERIVPPGGTVFVSPSKVESVQKSPLDWFIQAVGGEAATDF---------- 894 Query: 871 ILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDL--PYGAFGEIFWETQCQEMQQLA 928 S + + L + +E L R L G++ ++ +++LA Sbjct: 895 ---ARSLGTLVHAIAQDLPDASGSEYLVELVRRWPALGMKDNWEGKLDFQRAEGMVRKLA 951 Query: 929 DRVIACRQPGQ-----SMEIDLACNGV-----------------------QITGWLPQVQ 960 V+ R G+ + ++ + + G + +++ Sbjct: 952 QYVLVMRSEGRSLVGVERDFEVKLPDIVDIPQPETLVPAATDAEPEVRSAVLRGQVDRLE 1011 Query: 961 PDGLLRWRPSLLSVAQGMQL------WLEHLVYCAS 990 D R L + + Y A+ Sbjct: 1012 IDAEGRLVIVDLKTGKRQPSKADLARHPQLGAYQAA 1047 >UniRef50_A6LT39 UvrD/REP helicase n=18 Tax=Clostridium RepID=A6LT39_CLOB8 Length = 671 Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats. Identities = 50/504 (9%), Positives = 129/504 (25%), Gaps = 93/504 (18%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG--EQDVGNPLLASWGKLGRDY 310 D L + ++ + + + + + VG+ + G Sbjct: 189 DKNMLLSYRKLFKYVLVDEFQDCDEMQIDFLRLINDGEDNNLFAVGDEDQCIYSFRG--- 245 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAG---VNIEEFSRSDNKRPL 367 + + F + + + + N + E + + Sbjct: 246 -------SKPEYMVNFDKIFIGGKKYYLSINYRSRMNIVDKSKTVIAYNEKRNNKEIKWN 298 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + + + ++ + + E L D ++ + + D V+ I Sbjct: 299 KECEGIVKWFNPYNEKMQAESLTDIVIN--NKTLGINYEDNAVLYRTNIESMSVI----- 351 Query: 428 SAPADRYLPYAISDRR-ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 R +P+ + DR H + IS L L F L +++ P I+ Sbjct: 352 DVLTKRKIPFTLLDREYNFFEHFICRDLISYLRLSVDEFDRNSFLQIINRPF----RYIS 407 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + L Y++ + E + I R + + + Sbjct: 408 KGNLFYIKNYDREES-PFTIIISKEDTPPFQKKKLDELRKDINYLNKISLSSAIAYIVMD 466 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 + D + L + ++ + + E+L ++ + +T+ Sbjct: 467 LGYRDYLQKYANKFNQSFEDLEDIIEEFKLSAEGYKTIFEFLEHIEEVKQSIEESKRKTK 526 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 ++ T+ Sbjct: 527 REGVIL-------------------------------------------------STIHG 537 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 ++ + FK V ++ + P + + +++R LF + A Sbjct: 538 VKGMEFKNVYVINCVEETIPHASSI--------------KENIEEERRLFYVGITRAIDN 583 Query: 727 LYISYIGRSIQDNSERFPSVLVQE 750 LY+ + + S + E Sbjct: 584 LYLFSP--RSRKGQFKDVSRFIIE 605 >UniRef50_A6P133 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P133_9BACE Length = 1053 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 56/532 (10%), Positives = 124/532 (23%), Gaps = 113/532 (21%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG-QLFNSDGEQDVGNPLLASWGKLGRD 309 + K L ++ + + +G+P + +G G D Sbjct: 620 ARAEGAADKDLKPFTHLLVDEFQDCDPIQYRLLRAWNRAGESLFVIGDPDQSIYGFRGGD 679 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK--RPL 367 S + L + P+ + + + + E + + + Sbjct: 680 -------GASWRHL---AEDWPEVRTVRLTENYRSRAEILRCALPVIEKNGGGPRGLHSV 729 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAML--------EEDPTLTPRDIIVMVADIDSYS 419 + +P + + + + + T D V Sbjct: 730 PGDGGRVRLVTADTPLSQGIFVAREIGRQVGGMDMVSAHGEAARTFSDFAVCCRTRRQL- 788 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + +P A+ + +H + + + LAL+ Sbjct: 789 ----ELLEECLRKEDVPCAVVGKGGFLTHRTVRGALGFFRALAWPEREDPSLALMLG--- 841 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + + W ++ + E A GL+R Sbjct: 842 ----------FDCPPDKAHAAAEVWRQENGSPVERARAAEAACPDADGLSR--------- 882 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 L L L +N Sbjct: 883 ----------------------------FRALMEQLAPLVGRDKPVRLLEAYGRAVNQAG 914 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 E M + ++ + + +A L Q + AG V Sbjct: 915 TEPLERLMNMAVFHRRMEDFL--LSLTVGREADLLR-------------SAGQGYRAGYV 959 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 + TL + + F VV L G+ G+ P + + D ++R LF Sbjct: 960 TLTTLHAAKGLEFPVVFLCGVEKGLLPYCS----------RRRASDP---AEERRLFYVG 1006 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE 771 + A ++L + PS + ++ + + + Sbjct: 1007 MTRAMEELILVAGP---------EPSPFLADIPPEALGTEQVSRHARSGDGQ 1049 >UniRef50_C7XXL2 Recombination helicase AddA n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XXL2_9LACO Length = 1281 Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 71/662 (10%), Positives = 165/662 (24%), Gaps = 148/662 (22%) Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 KA + R Q + +R+ + + ++ + Q+ Q Sbjct: 302 KAHYDELKDGRNELKKRLKTLQDKYFQYDERELRAKTAAARMMVEELVSVTKDFRQSYQE 361 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPA------YLAKLLTRQRRHSFEDRELPLFRDSENA 283 + H+L + +Y I L +L R ++ + + Sbjct: 362 --AKLARHMLDFSDLEHYAYQILTNQSDAGKQVLNELRHHYREILVDEYQDTNRLQDDLL 419 Query: 284 GQLFNSDG--EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD 341 QL + VG+ + + D L E Q + ++ + + Sbjct: 420 NQLHDPQLNHLFMVGDVKQSIYRFRQADPTLFLDKYERYQS------SSKNDETIILAEN 473 Query: 342 ILELENRAVAGVNI-------------------------------------------EEF 358 + N + Sbjct: 474 FRSMNNVTEFTNLVFTQLMDRTVGEMPYDDQAQLKFAAKWYDPKEVSPVPTELMVYDANA 533 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQR-EVEVLHDRLLAMLEE-----------DPTLTPR 406 + I EV ++ R+ ML+ + + P Sbjct: 534 DNETIIDKEENQQRYIKLPEGSDKYAGEVWMVAMRIRQMLDNQERIYDPELGHERPIQPA 593 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 DI+++ + + +P + D + + ISLL + D+ + Sbjct: 594 DIVILERTKSPNNRIV-----EQFGQLNIPVVVQDVQNYFKATEVRTMISLLKVIDNPYQ 648 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 ++A+L P++ L R+G + V+ Q + Sbjct: 649 DIPLVAVLRSPIVG---------LTEPEMAYLRINHRYGNFYEAVQFFTQQDPEQWSATT 699 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 + + +L L+ L +L ++ Q+ ++ Sbjct: 700 DVD---------------------------LEKLHVKLSRFLDRLTKFKVTAQQQSLVDL 732 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 + + ++ + + + + + +R + Sbjct: 733 IWQIYQTTGYLDYVGGIPGGSQRQANLHALYERAHTYEQSSFKGLYQFIHFIERMQKRDE 792 Query: 647 QE-RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND----------------------- 682 VN+ T+ + + F +V ++ MN Sbjct: 793 DLGEAPVELATDAVNVMTIHGSKGLQFPIVFVIDMNHHFNSRDVAGNLVIEPHLGIGIRY 852 Query: 683 -GVYPRQLAPLGFDLMSQKPKRGDRSR-----------RDDDRYLFLEALISAQQKLYIS 730 G P + + K R R ++ L AL A+Q+L ++ Sbjct: 853 LGDAPMKGDDQSLTAENIKVTYDLPQRTVVADAITRANRAEEMRLLYVALTRAEQRLILT 912 Query: 731 YI 732 Sbjct: 913 GS 914 >UniRef50_Q6CK19 KLLA0F14256p n=1 Tax=Kluyveromyces lactis RepID=Q6CK19_KLULA Length = 966 Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 83/766 (10%), Positives = 207/766 (27%), Gaps = 106/766 (13%) Query: 66 ASFIWDMFVRVL-PEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL 124 A F + + + + P + F +++ + L P L + + T S +L Sbjct: 40 ARFAYLVIEKNIHPLRIIMTTFTRKAANEIKERLQPILSQAGISSNGLLIGTFHSICARL 99 Query: 125 FQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRW 184 + + + + + + + + L + E +T +L + R Sbjct: 100 LRQAGHLIGIPKNWSIAKTEDINTILKTLLEDTPVEIIQ--------SSTFTTELSENRT 151 Query: 185 HRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPC 244 + L + + T L + I + + L + +L + Sbjct: 152 NVRFLRTKISDLKAKGVTPQAYLKDQSHDSAIQYIYERFQDTLLSEALLDFDDILLYSKI 211 Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-----DGEQDVGNPL 299 I R ++ + + L G VG+P Sbjct: 212 LLMQRRIWS---------FVRHVLVDEYQDTNELQLDLIYLLARGKHDKCSGITVVGDPD 262 Query: 300 LASWGKLGR--DYIYLLSDLESSQE--LDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 + + D L + Q + + L L+ + + Sbjct: 263 QSIYAFRFASSDNFNKLIERCPVQSAQISLIDNYRSAQTL-------LDFSEKVIGQQIK 315 Query: 356 EEFSRSDNKRPLDPLDSSIT--FHVCHS-PQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 R + + F + E L +L + D+ +++ Sbjct: 316 NRIKRDPLRAQFNHNVKPFYSYFQRTDTFENSESNSLAHEILYLKSLPGLFKFSDVAILL 375 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 A +PY I + + F+ L + S +L Sbjct: 376 RTRRQVYDI-----EKALIKNRIPYRIVNAKGVWEKKESGIFLDYLRIISQDSCSLAILR 430 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 + A I +R ++ ++ R ++ Q + Sbjct: 431 C----LQFASNGIGSTTIRKIKSAFDKDRCRNSLEVLKELCESNDLNNQKISAALKRFIN 486 Query: 533 LGYAME---SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 L ++ + + ++ EL L +N + + + L+ Sbjct: 487 LVEKLKLKCEEYDTYDGLKELFAEIYMLGELYSVLKISKETINEQIKDRSLKEFLQTEHQ 546 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQ------WQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 + F + + +I++ I ++ ++ Sbjct: 547 NMFKVYELFTEYELDQNDEHIMIQENAADPNDLALIKENFNSNDLNFFEVITFFTKSISL 606 Query: 644 RLDQERISQR-------FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR--QLAPLGF 694 +E ++ L V + T+ + + + VV + +N+G+ P Q A Sbjct: 607 YSSEEENTENSLDKLANHLQERVTVSTIHAAKGLEWPVVFIPSINEGLIPFTEQSARQRL 666 Query: 695 DLMSQKPKRGD---------------------------------RSRRDDDRYLFLEALI 721 + +++ + G+ + +++R +F AL Sbjct: 667 EDLAELRRDGEACNDLNNCSMGSGEFDNIKEELRGKESDLIDDLETTLNEERRIFFVALT 726 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 A+ LY+S G+ S+ ++ + +++ Sbjct: 727 RAKDLLYLSSSGKK---------SIFLKNCEQLYSNNVLFNNPQSI 763 >UniRef50_UPI0001789963 recombination helicase AddA n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789963 Length = 1373 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 74/772 (9%), Positives = 181/772 (23%), Gaps = 116/772 (15%) Query: 138 YLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETL 197 Y ++R + ++ E L E Q L + + ++L + R F+ L Sbjct: 286 YGIFREASFGKLKSVRKDEVLPELQEQVKELRDNVKKIVNELKNALFGRPAS--EFLREL 343 Query: 198 ESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYL 257 +A L V G + + L G + Sbjct: 344 HTAAPLMMELAETVIAFGERYREAKAAKGMVDFNDLEHYCLHILRHPDSVPGHMMPSDAA 403 Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD--GEQDVGNPLLASWGKLGRDYIYLLS 315 + + ++ + + + VG+ + + + L Sbjct: 404 MEYREQFDEVLLDEYQDTNSVQEDIVRLISREMPGNRFMVGDVKQSIYRFRLAEPGLFLD 463 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS---------------- 359 + + + + ++ + A + Sbjct: 464 KY---KTFSSGTGTSQTGIRIDLARNFRSRMEVVDAVNLLFRQIMNESVAEIAYDERAEL 520 Query: 360 -------------------------------RSDNKRPLDPLDSSITF----HVCHSPQR 384 + + + + Q Sbjct: 521 VCGASFPEQETNGGANPYMPEMLLIDRAGKGPEEQSDESASEEDGVQLEAEALEMETAQL 580 Query: 385 EVEVLHDRLLAM--------------LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 E + ++ M L+ D+++++ ++P I Sbjct: 581 EARAIARKIREMTGESGKPLMVYDKGLKTMRPAGYGDMVILLRSAMVWAPLII----EEL 636 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA--------R 482 +P + +E +SLL + D+ + ++L P+L R Sbjct: 637 RLEGIPAFGEQNKGYFQATEVEIILSLLQVIDNPRQDIPLASVLRSPILGLSEEEMAQVR 696 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 L+ V+ S +D GL G+ + + Sbjct: 697 LCAKGTYYDALKAAVSLSVAPPVMDPARPMGFVDGKWTPGAGLEGLAEAAAGHELVAGSH 756 Query: 543 EWQSVLPYD-ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 + L + + + AEL L + +L WR+ Q + + + ++ Sbjct: 757 LSDAPLTAEGHAIEISAELGAKLGLFMDRLQRWRQEARQGSLSDLIWGIYSETGYLDWVG 816 Query: 602 DAETEAAMTLIEQQWQAIIAEGLG-AQYGDAVPLSLLRDELAQRLDQ--ERISQRFLAGP 658 + L +R Sbjct: 817 GLPGGRQRQGNLTALYDRAVQYEQDTASRGLFRFLTFISRLRERGGDLGTAGGTESQGNA 876 Query: 659 VNICTLMPMRSIPFKVVCLLGMND-----------------GVYPR-----QLAPLGFDL 696 V + T+ + + F VV + G++ G P+ Sbjct: 877 VRLMTIHKSKGLEFPVVFVAGLSKNFNQQDLNAPFLMHKELGFGPKFVDEGMRVSYPTLP 936 Query: 697 MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE--LIDY 754 +R ++ + AL ++K+ + + + + S Q + Sbjct: 937 NLAIRRRSQLELLAEEMRVLYVALTRPKEKMILVGTVKDL----PKKVSAWAQADFNPEL 992 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW 806 + + L + A ++ P+ + +W Sbjct: 993 LLPDYVLARGRSYLDWIGPAVIRHPSASPLRGQAGLPEETSSRALAADRSQW 1044 >UniRef50_B2GEY4 ATP-dependent helicase/nuclease subunit A n=3 Tax=Lactobacillus fermentum RepID=ADDA_LACF3 Length = 1337 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 93/924 (10%), Positives = 226/924 (24%), Gaps = 168/924 (18%) Query: 256 YLAKLLTRQRRHSFEDRELPLFRDSENAGQLF--NSDGEQDVGNPLLASWGKLGRD---- 309 A+L + ++ + + L + VG+ + + D Sbjct: 399 VQAELQRHYKEIMIDEYQDTNRLQDDLLRLLHKSGQNHRFMVGDMKQSIYRFRQADPTLF 458 Query: 310 ---YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL----------------------- 343 Y +D +SS+ LD + + + ++ + I Sbjct: 459 KDYYDQFSADGQSSEALDLSDNYRSRHEVTDLVNLIFEQLMDQQLGEMVYDDKASLKPKA 518 Query: 344 ----ELENRAVAGVNIEEFSRSDNKRPLDPLDSS-ITFHVCHSPQR-EVEVLHDRLLAML 397 + + + A + F K +P I EV ++ R+ +L Sbjct: 519 DWGADRDQASPATPELLLFDGGVKKTTANPTGEDAIVVRQPEDKVASEVWLIGQRIRELL 578 Query: 398 EED----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 ++ +TP DI ++ + I +V A LP + Sbjct: 579 AKETILDPETKRVRPITPGDIAILSR-----AKRIHSVIAEQFAKLNLPVMVHGVENYFK 633 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR----FDITEEGLRYLRQWVNESGIR 503 + +SLL + D+ + + A+L P++ + Sbjct: 634 ATEIRVVMSLLKVIDNPYQDVPLAAVLRSPLIQVAPEVAAKFGLSQGENRIGFTEPELAY 693 Query: 504 WGIDDDNVRELELPATGQHTWRFGL-------TRMLLGYAMESAQGEWQSVLPYDESSGL 556 ++ + + + WR + E G+ + +E Sbjct: 694 LKVNSTSKDFFGVVQQNYYAWRDQEVEAVENHDALTEEELAERVAGDPAGLATKEELGVN 753 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 + LA + RR + ++ + + ++ Sbjct: 754 CGLIYLKLARFFELRDHLRRVAQRRPLVDLIWTIYQATGYLDYVGGMSGGPQRQANLHAL 813 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF-LAGPVNICTLMPMRSIPFKVV 675 + + + +++ ++ D + +N+ T+ + + F +V Sbjct: 814 YERASGYEESGFKGLYQFIHFIEQMQKKNDDLGEATTALAGDAINVMTIHKSKGLQFPIV 873 Query: 676 CLL----GMNDGVYPR--------------------QLAPLGFDLMSQKPKRGDRSRRDD 711 L+ P + ++ R R + Sbjct: 874 FLVETTHQFQADRDPVTIEPQAGLGFTYVDSTANETMRVKHPLVQQAALKEKKKRQDRAE 933 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDNSER--------FPSVL------------VQEL 751 + L AL A+Q+L+I+ + + S L + + Sbjct: 934 EMRLLYVALTRAEQRLFITGYVKDADLTKKMDKWNRAFDSASPLLTTTTRLKGQSMLDWI 993 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 + + ++ P E+ A LT ++ + + A + Sbjct: 994 MMTLVRTANFPTLR--EGVEAAATPLRGLTKAAYQIKLQNADQVQAALNTPLDLHPNATA 1051 Query: 812 QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI 871 + + + L + + ++ F +D + Sbjct: 1052 EQATPAAATSRQFKADLERVLNFTYPDQVATQTTAFQAVSTVREAFARQDPTNLEMGRLE 1111 Query: 872 LE---------------------------------GLSRYQINQQLLNAL-----VEQDD 893 ++ G + + L +++ Sbjct: 1112 IDRDQIKEAGAYLAPEERAFENPAFITGASDQEPTGTAIGTATHLVFQKLPLTEPLDEGA 1171 Query: 894 AERLFRRFRAAGDLPYGAFGE-IFWETQCQEMQQLADRVIACRQPGQSMEIDL------- 945 L + +G + I Q +VI E+ Sbjct: 1172 VRALIKSLTESGLIDNPQVAAGIDVAGVVSFYQTGLGQVITAHPEQVHREVPFSMLLSAH 1231 Query: 946 ---------ACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGES 996 + V I G + + + Q E Sbjct: 1232 DLFSGIGATDDSEVLIHGIIDGYVQHDD-QIDLFDYKTDRISQAHPE-EDLQELADKYSG 1289 Query: 997 RLFLRKDGEWRFPPLAAEQALHYL 1020 +L L D + + E+ +L Sbjct: 1290 QLVLYADALTKMTGVPLEKIHRHL 1313 >UniRef50_D1VUK5 UvrD/REP helicase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUK5_9FIRM Length = 613 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 55/505 (10%), Positives = 132/505 (26%), Gaps = 95/505 (18%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDY 310 D + K + ++ + + L + V + + +G G Sbjct: 193 DDAYFKNKYRSYFDFIQLDEGQDTSYVQFLILKLLAKPKNNIFIVADDDQSIYGFRGAKP 252 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPL 367 LL + D ++ ++ + +N + Sbjct: 253 DELLK----------LNETYKDLKIYYMEENFRSSKNIVNISNLFIGQNQNRFKKAICTN 302 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + + + + + E + D+L + ++ + S + Sbjct: 303 NDWKNPVELIKLKNSLDQYEFIRDKLPKLQGSC--------AILYRNNLSAIGLV----- 349 Query: 428 SAPADRYLPYAISD-RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 + + I D + SH ++ I ++ LAL I+ Sbjct: 350 EFLERNNIDFNIKDNKNKFFSHFIVRDIIDIIIFS----NDLSNLALYQKFYYKLEGYIS 405 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + + YL+ V ++ Sbjct: 406 KRHIAYLKNKV------------------------------------------TDNIFKE 423 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 ++ Y + + LAS L + L + L + + + E Sbjct: 424 LMAYPNLPPYYLKNISKLASDFKILKKMK--------LSKALSFIQYEMGYNKYLE-ENA 474 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + + + +A + L R + + T+ Sbjct: 475 KRLGENMNSISEYL-FYISLIGENAKDIDEFIGRLKHLQFLLRKPNDSNIN-LFLSTIHS 532 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + F V ++ + DG P + A D +++R LF A+ ++ Sbjct: 533 SKGLEFTNVFMIDLIDGNIPSKSAIDIL--------PDDTLGLEEERRLFYVAMTRTKEN 584 Query: 727 LYISYIGRSIQDNSERFPSVLVQEL 751 L++ Y +N + S + EL Sbjct: 585 LFLIYPYYR--NNIKNEMSRFLIEL 607 >UniRef50_A8SI09 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SI09_9FIRM Length = 1160 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 120/1089 (11%), Positives = 258/1089 (23%), Gaps = 178/1089 (16%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG--IAA 58 ML++ L+ + + ++LV + + + ++ G ++ Sbjct: 41 MLKLVLGTSGSGKTTLLYARIRARAEAG--KRSILLVPEQFTSST-EARIYRELGDALSG 97 Query: 59 NIDFPLPASFIWDMFV-RVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTD 117 ++ S + + + + + + + L + HY Sbjct: 98 MVESYSFTSLAEHILAIEGGAAVQTLTDAGRAVLVRRALEELQDNV---------HYYYR 148 Query: 118 DSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTH 177 R+ AA+ D+ E A +++ Sbjct: 149 H---RRSAAFCQMAAETIDELKSAGLSGQQLQELARDCGTESAKLGELALIFQGYESLLA 205 Query: 178 QLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIH 237 G R L +E + P L+ I+ Sbjct: 206 GTGMDPADRLELAADRLEAALARDELP--------------------DFLREREVFIDEF 245 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 F P + R E+ + D E G Sbjct: 246 DTFNAPKK-----------------RLMGAMLAALPAVTVALCEDGAPMQPGDLELFSG- 287 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEE 357 K + L+ +Q P+ L +L ++ G+ Sbjct: 288 ------AKQVAAQLRQLARKNGAQV------AAPELLR-------RDLRHKDAPGLAALT 328 Query: 358 FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDS 417 + S + E + ++ + + I V+ DI Sbjct: 329 ELLETGSCTPPESAPELRLFAAASREEEARCAAAAIRRLMRQ--GVRCGKIAVVCRDISL 386 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 Y ++ F A +P + + A +LL+L ++E + L Sbjct: 387 YRAAVRYEFRMA----EIPLYCDEPTTPEFSAPATAVRALLALLRGADMTEQLTVLAKTG 442 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + D+TE + L + + + Sbjct: 443 L----CDLTEPEVCALENYAYTWSPNAAAWRAEFTKSPRGFGDAELTEEDTQNLTRAENA 498 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 L S ++ L L +L + Q + Sbjct: 499 RKKLVTAVDTLRGKVRSANAEQISRALYFCLKELGAEGQQAVQVEDIR------------ 546 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA- 656 ++ E + + D + L + Sbjct: 547 -TARGIPAAEEAAREWNVVMQLLDEMARLLGSQGITVPEYEDLFSLLLRSSDLGHIPQTL 605 Query: 657 GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD---------RS 707 V + + MR V +LG+ +G +P A G + + + Sbjct: 606 DAVVLASAGKMRLDAPDYVFVLGLAEGEFPCTPAESGLLTHADRDLLMAKQIDLPDCFEN 665 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY--LPGDE 765 R ++ F +AL + + L++S+ + ++ +++ + + D Sbjct: 666 RVVREQVCFYKALTAPAKGLWMSWPK-----GQGQTLCAALEPIVEALQPAAPQLELIDL 720 Query: 766 ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 A + + + + A L + + VQ LP Sbjct: 721 AATPADGLDVLGGGWPLTELERASLTEALRAPGEGVQAPRGLALLQRMEQDPPRQVQDLP 780 Query: 826 FT-----LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQI 880 + L++++ F Q L + R D + Sbjct: 781 TLETLLGRRLHISPSQLEKYYTCRYGYFLQYVLGLKPRRRAELSAD---------QSGTL 831 Query: 881 NQQLLNALVEQDD---------------------------AERLFRRFRAAGDLPYGAFG 913 +L ++ + RR+ + Sbjct: 832 MHWVLQMALDPHPGADNPCAGLRPFLELDDAAMADLAAALVDEYARRYLPEDTARFAYLL 891 Query: 914 EIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNG---------------VQITGWLP- 957 ++ + L D + + E+ + VQ+ G + Sbjct: 892 SRLKKSMTSLLCYLRDEQNQSQFKPVACELKIGRGEDAVPGQVYRLSDGRTVQLVGTVDR 951 Query: 958 ---QVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLF-LRKDGEWRFPPLAA 1013 ++ DG R E VYC LF L +D RF Sbjct: 952 ADEWIEDDGTRWVRVVDYKTGSKKLDLKE--VYCGLDCQMLLYLFSLTRDAGGRFTGAQP 1009 Query: 1014 EQALHYLSQ 1022 L+ L+ Sbjct: 1010 AGVLYLLAD 1018 >UniRef50_Q897M0 ATP-dependent nuclease subunit A n=1 Tax=Clostridium tetani RepID=Q897M0_CLOTE Length = 1147 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 86/982 (8%), Positives = 223/982 (22%), Gaps = 225/982 (22%) Query: 151 TGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSR 210 E + + + ++ + + L IE + T Sbjct: 195 RDKAKESINKLKEDIGLGYENVEKNMKDLYPRMKC-------LIELVMKFTMEYDKRKRE 247 Query: 211 VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFE 270 I + + L+ L K ++ NP + + + + Sbjct: 248 KNIIDFNDIEHFALEILTDFDKEEKV-----NPS----------SVALEYRNKFEEVLVD 292 Query: 271 DRELPLFRDS--------ENAGQLFNSDG------EQDVGNPLLASWGKLGRDYIYLLSD 316 + + F +N Q D VG+ + + L Sbjct: 293 EYQDSNFVQEAILNSISRQNNLQSKIEDEKLIIPNLFMVGDIKQSIYRFRQAKPELFLRK 352 Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN------------- 363 ++ + + + +N I + S N Sbjct: 353 Y-NNYSEEVSSKYRK----IKLFKNFRSRKNIIEGVNFIFKQIMSKNVGELEYGEEEKLN 407 Query: 364 -----KRPLDPLD--SSITFHVCH---------------------SPQREVEVLHDRLLA 395 K + D I H+ + Q E ++ + Sbjct: 408 YGADFKELEEGKDLERDIEIHLMDKEENIEPYTEELGLEEEENIDNIQLEARMVGKVINN 467 Query: 396 MLEEDPT---------------LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 +++++ + + RDI++++ + + VF + +P Sbjct: 468 LIKDEESNSFMIQDKSTKEYRKVQYRDIVILMRATSAMAN----VFTEELNNVGIPVFAD 523 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 ++ +S+L + D+ +L++L P+ + +R + + + Sbjct: 524 TSSGYFETIEIKTIMSILQIVDNPRQDIPMLSVLRCPIFSFS-PEDIIDIRLINRDI--- 579 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 + L ++ + + + EL Sbjct: 580 ----------------------SIYECLEKIKNKEPCLEEEKVY--------IDEINEEL 609 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 + S L +LN+WR + + + ++ + Sbjct: 610 KERIISFLEKLNLWRDNSIHMSIDQFIWYLYTETGYYGYVGAMPGGVQRQANLRLLFERA 669 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPVNICTLMPMRSIPFKVVCLL 678 + Y ++L ++ V I ++ + + F VV + Sbjct: 670 KQYENTSYKGFFNFISFINKLRNTSGDMGSAKILGENENVVKIMSIHKSKGLEFPVVIMA 729 Query: 679 GMNDGVYPRQLAPL----------------------GFDLMSQKPKRGDRSRRDDDRYLF 716 G G + + + ++ ++ + Sbjct: 730 GTGRGFNLQDIRKDILFHHQLGFGPEYVDLDKKIKYPTIMKKIIAQKIKLETFSEEMRIL 789 Query: 717 LEALISAQQKLYISYIGRS-----------IQDNSERFPSV-------LVQELIDYIGQS 758 A A++KL I+ ++ + +R P + ++ + + Sbjct: 790 YVAFTRAKEKLIITGSVKNIEKSMSEWCFTGGEGGKRLPEYELIKSKNYLDWIMPTLTRH 849 Query: 759 HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHS 818 E E + + + + + + + + K S Sbjct: 850 ICFQKHIRRQFPEIEIKNGIEDNSCWSLQLWHKKELLEDKLEETKERDIIKEIEWNKEKS 909 Query: 819 EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI------- 871 + P + L V+ E+ DT Sbjct: 910 CKNIHEEEVEKRLNWKYKYIKASEIPAK------LSVSEIKSRFELLDTGNSDNLIEENI 963 Query: 872 -------------LEGLSRYQINQQLLNALVEQ-----DDAERLFRRFRAAGDLPYGAFG 913 ++ + Q +D E L Sbjct: 964 FFRKPQFLEEFKKFSSAEIGTFTHLVIQHIDFQRTNSIEDIENQIEELIKREFLTKEQAK 1023 Query: 914 EIFWETQCQEMQ-QLADRVIACRQPGQSMEIDLA---------------CNGVQITGWLP 957 I + ++ + DR+ + + + I G + Sbjct: 1024 VINIKKIYNFIKSPIVDRIKKSDNVRREESFYIEMSSKDLIPSISEVYKDEKILIQGVID 1083 Query: 958 QVQPDGLLRWRPSLLSVAQGMQ 979 +G Sbjct: 1084 LYFQEGN-DLIILDYKTDYIED 1104 >UniRef50_B4S6V4 UvrD/REP helicase n=2 Tax=Bacteroidetes/Chlorobi group RepID=B4S6V4_PROA2 Length = 984 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 74/766 (9%), Positives = 181/766 (23%), Gaps = 136/766 (17%) Query: 266 RHSFEDRELPLFRDSENAG-QLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELD 324 ++ + + VG+ + +G G D ++ Sbjct: 227 HLMVDEYQDVNISQERLIRGLYSRLNSLFVVGDDDQSIYGWRGADVRNIIE--------- 277 Query: 325 AFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS---RSDNKRPLDPLDSSITFHV--- 378 F P+ H + ++ + +K P+ D +I Sbjct: 278 -FDQRYPNCSTHTLSTNFRSTNTIVSTSDRFIQHQLSTARIDKAPISNSDGNIQHFGNLW 336 Query: 379 CHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 + Q E E I Y Sbjct: 337 FRTKQDEAEW---------------------------------IANRINQLL---GTKYI 360 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 +D R A + +R + A + E + + ++ Sbjct: 361 ETDGSERGLTKSDFAILMRSVQGGTRNGGAPYHRDYTNALSKADINYIIEAEGSIFERLH 420 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 + D + F + +L + + + ++ Sbjct: 421 A----RTLRDAMSLLRSPGYPRREAINFFNSNILPVFPNADLNKFLEILADWNN------ 470 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 + + RR + + + E L R F + + + Sbjct: 471 -------QIHRPIGGARRKVYPQLLVHELLEAFRISTTEFQNHEQVM-RDLGVFSGIILD 522 Query: 619 IIAEGLGAQ-YGDAVPLSLLRDEL-AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 + + + + + D ++ V I T+ M+ + F VV Sbjct: 523 VEKVFVSIDTGQRYQSMLNFLENVAESGYDTTQVELMSRPDAVTISTVHKMKGLEFPVVF 582 Query: 677 LLGMNDGVYP-RQLAPLGFDLMSQKPKRGDR----SRRDDDRYLFLEALISAQQKLYISY 731 ++ + +P ++ + G+ ++ R S + LF AL A++ LY++ Sbjct: 583 IVDVVQQRFPGKRSSYNGWLPLNLIQNPLSRGLYQSNIFGEARLFYTALTRAERFLYVTG 642 Query: 732 IGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 + PS + + + + ++ R++ MP Sbjct: 643 SSIQPGLQRPKNPSPFKLIIQGL---NDPEVITDTTHLPDNIERIEQRPRIDEESMPTS- 698 Query: 792 QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQM 851 ++ + P++ F+ Sbjct: 699 ------------------------------------------FTEIKDYLECPMKYKFRK 716 Query: 852 RLQVNFRTEDSEIPDTEPFILEGLSR-YQINQQLLNALVEQDDAER---LFRRFRAAGDL 907 + E+ ++R +Q+ E + + + D Sbjct: 717 IYGYSP--AVPELFGYGLTTHTAINRAHQLFANAAPTREEAGEITEDVFHLKHVFPSRDP 774 Query: 908 PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME--IDLACNGVQITGWLPQVQPDGL- 964 E + + A+ +S+E ++ N ITG + + + Sbjct: 775 EREGPYERAKNASKRLVGNYAEGYPEDFVQSRSLEQRFEIKANNALITGSIDLLLREDNN 834 Query: 965 ---LRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWR 1007 L R + L + + + Sbjct: 835 GNILEARVIDFKSMDFPEGQLNPFFWINLSLQVQLYAYAADIVLGE 880 >UniRef50_Q1Q4K9 Similar to ATP-dependent DNA helicase subunit AddA n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4K9_9BACT Length = 1198 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 68/819 (8%), Positives = 198/819 (24%), Gaps = 160/819 (19%) Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-------- 291 R + + L ++ + + L Sbjct: 384 LLTLARNLLQNNAYRSIRTSLKKNFSAILVDEFQDTDPIQYDIILFLSEMVNHHSDTIHG 443 Query: 292 -------EQDVGNPLLASWGKLGRDYIYLLSD----LESSQELDAFVDVTPDNLLHNIQS 340 VG+P + + D + L + + + N + Sbjct: 444 IPLEPGKLFIVGDPKQSIYSFRRADIEAYEHVVKQICNNEAPLSLLENFRSHSGIVNAVN 503 Query: 341 DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHS-----------PQREVEVL 389 D+ + ++ KR I + E + + Sbjct: 504 DLFGEKIITEQQGLQPKYIPIHAKRIQSDPFQRIEIISVSDTNGEELTAEAAREAEADWI 563 Query: 390 HDRLLAMLEEDPT------------LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 + + D L +DI +++ P++++ + +P+ Sbjct: 564 AKWIKNNVFYDNGGDTSADAATSYKLKYKDIALLLRSFTQIRPYVES-----FKEHDIPF 618 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 + + + F++LL ++ + + ++ L P + Sbjct: 619 IAEGEKYFYTTQEVIDFMNLLRTIENPYDTIALVGTLRSPFAGLTDN------------- 665 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 + ++ + Sbjct: 666 ------------------------------------EIYLLKINDLLDYRKTISDNIDID 689 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 A +G S L + N+ R + + E + + F + + Sbjct: 690 A-TIGDFYSFLRKYNVRSRIIPVSHLISEIIN------DPRFAGITASAWQGEQKLANLK 742 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-----AGPVNICTLMPMRSIPF 672 + + L + + + +D+ R V I T+ + + F Sbjct: 743 KFYRTACKLEQIQGISLKHFINNMKKYIDEAREEGESPLSDETLDVVKILTIHKSKGLEF 802 Query: 673 KVVCLLG-----------MNDGVYPRQLAPLGFDLMSQKPKR-----------GDRSRRD 710 VV L ++ + + G L + + + + Sbjct: 803 PVVILGNLHGEAKKENETLDSVAFDWNTSTTGIVLGKGEQQLRNLQSIILENKINERTWE 862 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCD 770 +++ + A+ A+++L ++ + + ++ + ++ + + Sbjct: 863 EEKRVLYVAMTRAKERLILTGALKDNDK-------SYIGLIMKSLSDAYDISLNNEPETP 915 Query: 771 ESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE 830 R F+ + ++ + W + + ++ Q + + Sbjct: 916 SGHVRKIVFGNSEIFLENFNYTGARRFVSKTAEKTWDIDWNSFVRIWNDRKQSMFAETEK 975 Query: 831 TVP--LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 + L + PV T + I E + + Q+L Sbjct: 976 PLFTSPSALSEEIS-PVHY--------ETPTHNKHINSAEIQQEYAAAIGSLCHQILEKW 1026 Query: 889 VEQDDAERLFRRFRAAGDLP------YGAFGEIFWETQCQEMQQL-----ADRVIACRQP 937 Q + L+ ++ + + + + + + R Sbjct: 1027 DFQGTLQALYDLITSSVTIHFTNASLHHTIIHLIKTEAVTILTAFFHSKAYNELKNARIL 1086 Query: 938 GQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 G+ + I L G + G + + + + Sbjct: 1087 GREIPILLHWEGQIMRGTIDIIYE-FENQIIIADYKTDY 1124 >UniRef50_C4V2E5 ATP-dependent deoxyribonuclease subunit A n=2 Tax=Selenomonas RepID=C4V2E5_9FIRM Length = 1260 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 98/943 (10%), Positives = 209/943 (22%), Gaps = 214/943 (22%) Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQA 229 + L ++ A L F ++ L + +AL Sbjct: 343 EELCAAENRANTAIRQYARLALDFHHAFQNEKLERSLL----------DFSDLEHRALAL 392 Query: 230 LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L +H E + + +L ++ + Q+ + Sbjct: 393 LCRHPEQL-------QDDLNSVDPTDIAEELRAYYAAIMVDEYQDTNGLQEGILRQIAHD 445 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA 349 D VG+ + + D A+ + L + + Sbjct: 446 DNRFIVGDVKQSIYRFRLADPSLF------QHTYRAYRQDSSAGELITMSENFRSRAEVL 499 Query: 350 VAGVNIEEF-----------SRSDNKRPLDPLDSSITFHVCHSPQR-------------- 384 I +S P D SP Sbjct: 500 QPINEIFSQIMTESAVEIAYDQSARLNPGRTFDDDPAGKSLASPLEIDLLDADYSAEEAD 559 Query: 385 -----------EVEVLHDRLLAM------LEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 E + R+ + ++ L DI+V++ + + Sbjct: 560 DEGEELAAFAVESHYIARRIKELVDAGYTVQSGKALRWSDIVVLLRGAKERAVILM---- 615 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A + +P D + +SLL++ D+ + A+L P++ ++ Sbjct: 616 DALREAGIPSYADDTAGYFEASEIRMMLSLLAVLDNARQDTPLTAVLTSPMIG----MSM 671 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 E L LR + G Sbjct: 672 EELALLRIH------------------------------------------TPVGSIYDA 689 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 L ++ + + L + WRR E + R ++ Sbjct: 690 LKGADAEEVPPAVRNKAKEALQTIRCWRREALLHSVPELLWHLYRTSGYYDYVGALPDGI 749 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ--RFLAGPVNICTLM 665 + + D L +R ++ V I T+ Sbjct: 750 LRQANLRMLIDRAGDFERTNERGLFRFLRYMDALQRRSTDLSAARTLGESEDVVRIMTIH 809 Query: 666 PMRSIPFKVVCLL---------GMNDGVYPRQ---------------LAPLGFDLMSQKP 701 + + F VV L ++ V Sbjct: 810 RSKGLEFPVVFLANIAGAFNTQDISGDVLYHAHAGIGVRVYENTEIGRQKYDTLGRRSVK 869 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 + R ++ + A+ AQ+KL ++ R+ + R + +L D+ Q Sbjct: 870 EVIRRETIAEEMRILYVAMTRAQEKLILTGTLRTSRSGLSR-----LAQLRDFCQQYARE 924 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFV 821 G+ + A L D Q G REW ++ + Sbjct: 925 EGETFPDAAILGASCYLDWIALALMRHPDGQALMEGVEGIELREWSDEKARFAVRIEKAD 984 Query: 822 QPLPFTLPETVPLETLQR--------------FWAHPVRAFFQMR--------------- 852 + E L + + + R Sbjct: 985 VRTSRSEEERAADAELSAIRSGEPLSPGVRAPYVDSILSWTYDSRGTEQIHAKTSVTELK 1044 Query: 853 --------------------LQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN-----A 887 + + L + R L+ Sbjct: 1045 RENFPDEEVLPSFAPAVGAGAGGQEWEVPRFLRTAKRAALSPMERGTAMHALMQHLDFAE 1104 Query: 888 LVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEM-QQLADRVIACRQPGQSMEI--- 943 + + ER R G L A+ + + + L R+ ++ + + Sbjct: 1105 VPDIAAIERQARSLFDQGILTEEAYQSLDVRNVWRFVSSALGRRLREAKRVYRELPFGRL 1164 Query: 944 ----------DLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 + + + G + + + + + Sbjct: 1165 LPAKKYYKEAQDEADRIFLQGIIDVLFEEENGDYILLDYKTDR 1207 >UniRef50_C4Z991 DNA helicase II n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z991_EUBR3 Length = 1220 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 78/894 (8%), Positives = 210/894 (23%), Gaps = 180/894 (20%) Query: 209 SRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLA------KLLT 262 R F+ + L + A++A+ + ++ + + D L + Sbjct: 332 QRPFVKELIRLSLEFYDAMEAVKIKKRVFDF-SDIEHFALRILVDEQTLEPTETAREFSK 390 Query: 263 RQRRHSFEDRELPLFRDSENAGQLFNSDG----EQDVGNPLLASWGKLGRDYIYLLSDL- 317 ++ + + + VG+ + + + Sbjct: 391 HFEEIMIDEYQDSNQVQEDILTAISREHQGVGNMFMVGDVKQSIYRFRMARPELFMEKYN 450 Query: 318 ------ESSQELDAFVDVTPDNLLHNIQSDIL--------------ELENRAVAGVNIEE 357 + Q +D + N + + +DI + +E Sbjct: 451 TYTSDDSAHQRIDLHKNFRSRNEVLDFTNDIFYKIMAADLGNVQYDDDAALYPGASYPKE 510 Query: 358 FSRSDNKRPLDPLDSSITFHVCHS---PQREVEVLHDRLLAMLEED----------PTLT 404 R + + Q E ++ +R+ +++E + Sbjct: 511 TMRPELLLVDYKDEDLSEIIEDEDGDKVQIEALLIANRIRSLMENGMVTDKKTGQLRAVQ 570 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 RDI+++ + ++ + AV D +P + S ++ +S+L + D+ Sbjct: 571 YRDIVILSRSVATWGNTVAAV----LKDCDIPAHVESNTGYFSSYEIQVILSMLRILDNP 626 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 + A+L P++ G+DD+ + ++ G Sbjct: 627 LQDIPMAAVLASPIV-------------------------GMDDEELAQIRSAFKGVSFA 661 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 + L+ M E L + + R +A Sbjct: 662 QAALSAMAGEDGYEDE----------------------KLKAFALVFERLRGAVADTPIH 699 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA-- 642 E + + + + A Y D Sbjct: 700 ELLYMMLDETGFYRYASAMPAGKRRRQNIDMLIEMAAAYEKTSYKGLFHFVRYIDIQQKY 759 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYP---------------- 686 + E + V I T+ + + F VV + G+ Sbjct: 760 EIDYGEADTAGENDDVVRIMTIHKSKGLEFPVVFVSGLGKSFNTQDTKSDLVIHEKLGLG 819 Query: 687 ------RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI---------SY 731 + ++ R R ++ + AL A++K+ + S+ Sbjct: 820 LVEKTKSPRTKRPSLIRNEIESRIKRENLGEELRVLYVALTRAKEKIILTGGLSNAQKSF 879 Query: 732 IGRSIQDNSERFPS--------VLVQELIDYIGQSHY-----LPGDEALNCDESEARVKA 778 N+ + S + +I + + Sbjct: 880 EKYRGNVNANQPISFGQREGAGCYLDWIIPAMLSYPDKYTVSTVDATEFAARTAMDMAAN 939 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQ 838 ++ + + + ++ + S++ ++ + Sbjct: 940 DISKAQLIGHISAADETKAKELAEEFDFEYVYASDITKKSKYSVSELKHDSMVEKYDSTE 999 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE--------------GLSRYQINQQL 884 R P + L+ D E G R ++ Sbjct: 1000 REAERP-----KFLLEEKETYVPDFARDDEAGGASNESKEPKNAAGVNQGALRGTAVHRV 1054 Query: 885 LN------------------ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQ 926 + + + + + + D+ ++ + ++ Sbjct: 1055 MECLDFKSLCDIDTKDHVAVSAFVKKSMDEMLEKRLITDDMYRLTRPKLIEQFISSDVAA 1114 Query: 927 LADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL 980 + + + GV + G + + + Sbjct: 1115 RMAQADKRGDLYKEKPFVMDYEGVLVQGIIDVFWLENDKIVL-LDYKTDRVNAA 1167 >UniRef50_UPI0001BC38AF DNA helicase II / ATP-dependent DNA helicase PcrA n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC38AF Length = 1174 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 78/841 (9%), Positives = 206/841 (24%), Gaps = 163/841 (19%) Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQ----LFNSDGEQDVGNPLLASWGKLGRDY 310 +L ++ + + + F + VG+ + + Sbjct: 380 HVADELSELYDEIYIDEYQDSNYVQEKILNAVSRCRFGCNNIFMVGDVKQSIYRFRMARP 439 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 + + + +P+ + + + N + +I + ++ Sbjct: 440 EIFIDKYNTY-----TEEQSPERKIE-LHKNFRSTVNVINSVNDIFRRIMKKSVGNIEYN 493 Query: 371 DSSITFHVCHSPQRE--------------------------VEVLHDRLLAMLEEDPTLT 404 D + + + + E E+ R+ ++ E+ LT Sbjct: 494 DDA-ALNYGGNIKDEINTDTDICMYVKESDDYNDDSKGIINAEIAAMRIKEIMAENEELT 552 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 +D ++++ P + + +P + S + I +L + D+ Sbjct: 553 YKDFVILLRSGKDAGP----EYVDTLGNMGIPADYASTTGYFSAYEVRLIIDVLKVIDNE 608 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 +LA++ T + ++ + Sbjct: 609 RQEIPLLAVMKSYFAG----FTANEMALIKGNRRKKNY---------------------- 642 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 + + + + G A+ + + +R+ Sbjct: 643 -------------------YDCLCEFSKGDGETAKKCRKFMNFIG---EYRKKAGVMTIR 680 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 E + ++ + + + + + D++ Sbjct: 681 ELVSELIYSTGYYDYVGFLLNGSRRKMNINMFILQAEKFEKTSFSGLFNFVRYIDKIRNY 740 Query: 645 LDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN--------------------- 681 E + V I T+ + + F VV L + Sbjct: 741 DVDFGEAGNAGNDNNYVRIMTIHQSKGLQFPVVILGNSDKRFNEEDLKSKIIIDEDFGIS 800 Query: 682 -DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS 740 D V + F K+ +R ++ L AL A QKL ++ + S + Sbjct: 801 MDYVDLKSRRKQKFLFKEIMKKKYEREGTGEEIRLLYVALTRAVQKLVVTGVVSSKKYEE 860 Query: 741 ERF---PSV----LVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP-- 791 S+ + +YI + L + L + + Sbjct: 861 FTSDIDRSIIDMKFILGNKNYISLILGALQSDELCGKYNYICYDNELLTDNVKDAVKEDL 920 Query: 792 ----QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRA 847 + ++ E + + H E + +++ + Sbjct: 921 TDINELFRRAFSGRKDTEQVKNTVEYIYPHKEIKNLKSKYSVSEIKHMSMEENEDEASKV 980 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL-----VEQDDAERLFRRFR 902 R + R + ++G R + L + + E + Sbjct: 981 IAPERTKAVPRFRKGVDEE-----VKGTLRGTAYHRFFEILNYDCCKDYNSIEEYLKTSV 1035 Query: 903 AAGDLPYGAFGEIFWETQCQEMQ-QLADRV-----IACRQPGQSMEIDL----------A 946 AAG + G I + + +Q L R+ Q ++L + Sbjct: 1036 AAGKISEEYAGLINLKRFEEFLQTDLGKRMGSAYKKGLLFREQPFIMELGADMIDKEYPS 1095 Query: 947 CNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL----------WLEHLVYCASGGNGES 996 + + G + + + + Q + + L A + + Sbjct: 1096 DEKILVQGIVDAFFFEEDKVY-IVDYKTDRVEQGKAGEKALVERYHKQLELYADTISRVT 1154 Query: 997 R 997 Sbjct: 1155 G 1155 >UniRef50_D2B0K9 Superfamily I DNA and RNA helicase-like protein n=2 Tax=Actinomycetales RepID=D2B0K9_STRRD Length = 1228 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 76/691 (10%), Positives = 163/691 (23%), Gaps = 92/691 (13%) Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 ++A L + E+ K R ++ + Sbjct: 221 VEAYDRLKRSREVVDHGDQMALAARIAAKHAEVGEIERGRFAVVLLDEYQDTSHAQLVLL 280 Query: 284 GQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDA-FVDVTPDNLLHNIQSD 341 LF VG+P + +G G L V ++ Sbjct: 281 RSLFGGGHPVTAVGDPCQSIYGWRGASAGNLTRFPRDFTTASGELAPVRRLSISFRNGDA 340 Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCH-SPQREVEVLHDRLLAMLEED 400 +L++ R + +E + ++ H + E + D + +L + Sbjct: 341 VLDVAARVQLPLRMEAREVPVLVPGGNRVERGRVVCAFHETADDEAAWVADGIARVLGGE 400 Query: 401 PT------------------------LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 L P D+ ++ + A +R +P Sbjct: 401 SAPDGMPWGEGERKKAKQSAWGGPQCLQPHDVAILARKRSQF-----PALRRALEERGIP 455 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 + + P + ++ L + + ++ LL P R+ I L+ L + Sbjct: 456 VEVVGLGGLLTVPEVSDIVATLRVLYDPTAGDALVRLLSGP----RWRIGPADLKELGER 511 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 E R + ++ L + + + P Sbjct: 512 ARELN-RETREGGSMASDPLDQVVADMAEERGSLIDALDELPDRPEWQDLFSPLARV--- 567 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 L ++ +L I R Q P + + + R + + T Sbjct: 568 ------RLLAMAQELRILRAHTGQPLP-DLIIEIERRLGLDIEVAARGTAIGPFAARADL 620 Query: 617 QAIIAEGLGAQYG-DAVPLSLLRDELAQRLDQER---ISQRFLAGPVNICTLMPMRSIPF 672 A + + L L ++E + + V + T+ + + + Sbjct: 621 DAFLDAAARFAGDSEDPTLGAFLAFLKAADEEENGLDAGRVGESNSVKLMTIHASKGLEW 680 Query: 673 KVVCLLGMND------------------GVYPRQLAPLGFDLMSQKPKRGD--------- 705 VV + GM+ P+ + D Sbjct: 681 PVVVIPGMSQALSKAGTLTVGTMFPARPTTSPKWTDNPRKLPYPLRGDASDLPRLGGLSK 740 Query: 706 -----------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 ++R L A+ A L S PS + E+ + Sbjct: 741 EELAEFDERCRDRDLLEERRLAYVAVTRAHYLLIASGYRWGSAA-KPLEPSDFLVEIRET 799 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG 814 G+ + + + P + + + L A + G Sbjct: 800 CGRVSVWAPEAGEGA--TNPLLAEPAEAGWPVTPDGLRYEAVLDGATMVEAALAALAGQG 857 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPV 845 + F P Sbjct: 858 GDPAASRPRDGSAQAPGAENAPFSDFSDIPF 888 Score = 66.5 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 33/297 (11%), Positives = 74/297 (24%), Gaps = 39/297 (13%) Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 V E + G+ E E + + P + + + + + +E Sbjct: 943 VHEAVHEGGRVPGEEPGNGHVLPEGEPGPEHRRVPEEGQEPGNERAGALADLRGWDKERA 1002 Query: 808 PAASQAGK------AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 A + + A + LP + + +L + P + + + R Sbjct: 1003 KAWERDTELLLRERAVNRRRGGGQVELPTHLTVSSLVTLASDP-KTLARQVRRPVPRKPT 1061 Query: 862 SEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC 921 R + L + Q +RL G +I + Sbjct: 1062 PL-----------ARRGTSFHRWLESRWGQ---QRLLDEMELPGSSDGFEETDIQLDQLR 1107 Query: 922 QEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL- 980 ++ + + + G + V R+ Q + Sbjct: 1108 DRFEE--SEWAGREPLDVEVPFETMIADRLVRGRMDAVFELPDGRYEVVDWKTGQRPEGK 1165 Query: 981 ----------WLEHLVYCASGGNGESRL-----FLRKDGEWRFPPLAAEQALHYLSQ 1022 L + +++ F+R + R L E+ L L + Sbjct: 1166 KAEAAAAVQLAAYRLAWSHLADVPLAQVSAAFHFVRLNETVRPVNLLDERGLVRLIE 1222 >UniRef50_B6WA25 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6WA25_9FIRM Length = 1021 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 71/731 (9%), Positives = 201/731 (27%), Gaps = 99/731 (13%) Query: 223 YLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSEN 282 + + K E +L F++ + +++ + KL + + F++ + + Sbjct: 336 EFEKIYKNKKREENYLDFSDMEHEFIKLLENDDLVEKLQKQFKYIFFDEYQDSNDIQNYI 395 Query: 283 AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ------ELDAFVDVTPDNLLH 336 +L N + VG+ + +G L LES + ++ + D L Sbjct: 396 VDKLKNKNNLFFVGDVKQSIYGFRNARPELFLEKLESYEKDSDSVRINLSKNFRTDKDLI 455 Query: 337 NIQSDILELE--NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 + + I + + ++ R + D ++ ++ E E L + Sbjct: 456 DFNNYIFDRLMTKKNSDIAYKDDNHRLNYHFEFDEKYPKVSIKALNASINEEEYLIKEID 515 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 ++ + ++ +DI +++ + + +P++ + + F Sbjct: 516 DLI--NSGMSYKDIAILLRSSSK-----AYLIENELKKAGIPFSSDISKISFETVEVNFF 568 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 I++L + +L++L + Sbjct: 569 INILKYIANPKDDFTLLSVLRSEIF----------------------------------- 593 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 F + L + ++ Y+E EL ++ + Sbjct: 594 ----------DFSEDELSLISLSSDKKFFYEKFSLYEE--NFDDELSQKISDFNTNFADF 641 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 L + + FL + + + ++ + Sbjct: 642 SYILNFSNMYDFANIIFEKSGYYDFLKARDRGYERVQNIEAFIELMDDYDKNNENSLFGF 701 Query: 635 SLLRDELAQRLDQ---ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP 691 D L + + V I T+ + + FK V L + G R + Sbjct: 702 LTYIDNLKNQKKDNLKASRNLSDEEDLVRIMTIHKSKGLEFKAVILPEASKGFNTRGKSK 761 Query: 692 LGFDL----------------------MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 ++ + + + ++ + AL A++KL I Sbjct: 762 DMLLDKDLGIGINISDWDNKIKISSIKRDLILEKLNLNDKKEEMRVLYVALTRAERKLSI 821 Query: 730 SYIGRSIQDN--------SERFPSVLVQELIDYIGQSHYLPGDEALNCD-ESEARVKAHL 780 + S S + ++ + + + L+ ++ + Sbjct: 822 IGQKDLNEKGLDKIISSDSILDLSSYMDWILKILLEDKIMADFIDLDYKTDNFRNGAVKI 881 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP--LETLQ 838 + N+ + + + + K + +++ + + Sbjct: 882 DYIEEFKLNSELNFTDVKDMIDGKNYDEKIYKNIKEIFSYSYENLENTNKSLKKSVTEIA 941 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL-VEQDDAERL 897 + + + + + D P+ + L + + ++ L ++ D + L Sbjct: 942 KNYDLSNNGYEKSSFDDVEISHDFRRPNFDQISLSPTQKGTLIHKIFQELEFKEYDLDSL 1001 Query: 898 FRRFRAAGDLP 908 DL Sbjct: 1002 KIEIDKLIDLR 1012 >UniRef50_B2A610 ATP-dependent helicase/nuclease subunit A n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=ADDA_NATTJ Length = 1282 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 72/770 (9%), Positives = 193/770 (25%), Gaps = 167/770 (21%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 + +Q + +L + + L + I+ + + + + I S L Sbjct: 322 KKTFQKLVQNYFTRSKDELLRDLQQLSPLMNKLIDMVINMDDKYEEVKKQRGIMDFSDLE 381 Query: 221 PVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDS 280 + L P +++L R ++ + + Sbjct: 382 HYVYELLDQY-----------------------PEIVSELHQRYDEVMVDEYQDINQVQN 418 Query: 281 ENAGQLFNSD----GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 +L VG+ + + + L+ ++ F + + L Sbjct: 419 AILEKLTGQQSISPDLFMVGDVKQSIYRFRLAEPELFLNKYDT------FDQRSEEGSLI 472 Query: 337 NIQSDILELENRAVAGVN------------IEEFSRSDNKRPLDPL-------------- 370 +Q + + IE + P Sbjct: 473 ELQENFRSSPMVLESVNYLFSRIMTGSLSGIEYNEKVKLIPASKPRELYLNEDDNEDDKY 532 Query: 371 -----------DSSITFHVCHSP---------QREVEVLHDRLLAMLEED---------- 400 D H+ + +RE +++ + +++EE+ Sbjct: 533 EGQAENENQVIDGRTEVHLLENKDTNSREEDTEREAQLIATTINSLVEEEYRIYDRDLDD 592 Query: 401 -PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 L D +++ + + VF +P + ++ +SLL Sbjct: 593 YRKLDYSDFVILSRKTKEQAELVTNVFQE----HGVPLYAELDTGYFAAQEVQVMLSLLK 648 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 + D+ + +L P++ G+D + + E+ Sbjct: 649 IIDNPRQDIPLAGVLRSPLV-------------------------GLDSNELVEIRRSNP 683 Query: 520 GQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLA 579 G + + ++ + + + + QL WRR Sbjct: 684 GTDYYEACKRVLTNS---------------IEQQNQCSEKTIQKMQKFFSQLERWRRISR 728 Query: 580 QERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD 639 + E + + ++ + + + V + Sbjct: 729 ERSLAELIWDIYQITDYLDYVAGFPGGRERQANLWSFYDRALQFDSFSHSGLVKFLNFIE 788 Query: 640 EL-AQRLDQERISQR-FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 +L Q D + V + ++ + + F VV ++G+ + Sbjct: 789 KLVEQDFDLGKARTVSENENVVRLMSIHKSKGLEFPVVFVMGLGNNFNFNDQKGDLLLHK 848 Query: 698 SQKPKRGD----------------------RSRRDDDRYLFLEALISAQQKLYISYIGRS 735 R ++ + A+ A++KL++ G+ Sbjct: 849 DLGLGPKLVDLTNRIKYPTIAHQAIKGSLGRETLAEEMRILYVAMTRAEEKLFLVGSGKD 908 Query: 736 IQDN-----SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 I+ + + +G+ L + + + + F+ Sbjct: 909 IESKISVPEEPAAAQNYLDWIYPQLGEDSELFHKIWNDIPGQQDG---KSVEYNWKSYFE 965 Query: 791 PQNYQPGERQSYAREWLPAASQAGKAHS-EFVQPLPFTLPETVPLETLQR 839 Q + E+ +A S + + + + + L + Sbjct: 966 SLLSQTFTWEVDQEEFEDQKRTLEQAISYSYPYNIATEIVGKMSVTDLAK 1015 >UniRef50_A6CDV2 ATP-dependent deoxyribonuclease subunit B n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CDV2_9PLAN Length = 1125 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 109/984 (11%), Positives = 256/984 (26%), Gaps = 143/984 (14%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHR 186 + DQ + P+ ++ +V+ L A Q Sbjct: 76 FAETILQSLDQPVQTLPEISKRYLLRSIVDDLVAAGQIQ----------YFSSIAGTTGF 125 Query: 187 ANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRY 246 +L FI L+ P F L Q Q L + + + + R Sbjct: 126 LDLISHFISELKREEIWPEQ-----FSEACGRLKTDSRQKDQELALIYDRYQVALHEMRR 180 Query: 247 YWGDIKDPAYLAKLLT-------RQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 Y + + + L + + E L + PL Sbjct: 181 YDSEGRFWSARTALQEGMWGPFGQFDLIVLDGFADFTHTQYEILELLAARTSRLLISLPL 240 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 + + L + ++++ + +H + + + E Sbjct: 241 ENNLRRQ-----DLFAKSVVARQVL---ENRLPGTIHCVACE--RDAPASSRSQICEALF 290 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 + P I + E+EVL + +L + + P +I ++ Y Sbjct: 291 DNPRGIKPSPSAEQIKVLAVAGQRNELEVLAVEIKQLLLQ--GVPPEEISLVFRSTLEYG 348 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 I + +PY + + PV+ A + L + + + ++++LD Sbjct: 349 DLIH----ETLSAAGIPYFLGQEQEFSRFPVIRAIFTFLQIELDNWSFDSLMSILDSNYF 404 Query: 480 AARF--DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 + + + +R L + + E ID L TR Sbjct: 405 SPDWPEYKSGTAVRCLSRILRELK----IDSGKTDILNALEKEYRKANELCTRYPDQPKR 460 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 ++ E +S + + + + + I + + W Sbjct: 461 QAILLEMESAYHLAKRLSSETQKLRGKELFVTWIEILISLANEFGLPKAWSSEEPGTEAL 520 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD--AVPLSLLRDELAQRLDQERISQR-F 654 E L+ + + + + L R L L+Q+ ++ + Sbjct: 521 DQRDQLVWERFQKLLFHAVAE-VDQIEQFHQREAAPLDLLTFRSLLLDLLEQQTLALQTE 579 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD--------R 706 G V + +R++ + + G+++ +PR + + + Sbjct: 580 ETGRVQVLDASQLRNLSVPYLLVGGLSEASFPRSHREDCLYSEKDRGELNEYGLSLKRHA 639 Query: 707 SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ--------- 757 +++ ++ LF E + ++L +SY S F S + L+D Sbjct: 640 NQQQEEMLLFYEVMTRFSKRLILSYPAISST-GQPLFASPYLTALMDLFEPGALSVRQVG 698 Query: 758 --SHYLPGDEALNCDESEARVKAHLTCLHTR---MPFDPQNYQPGERQSYAREWLPAASQ 812 + ++A++ + L + +Q R + + A Sbjct: 699 ELNPLPRREQAMSARDLRILAIDELKRDQPGLFLQILEEPGFQATARNILSAVEMAVARF 758 Query: 813 AGK-----------AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 + A + F L+ + A P + F Q L + Sbjct: 759 EQEGFTEYEGIMVSAATRQAIHERFPQDYEFSTTQLELYLACPFQFFVQNVLGIEVPEPP 818 Query: 862 SEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC 921 F+ G+ + I +L L + D +L+ + + Sbjct: 819 EL---RTNFLQRGIHVHSILTRLYEQLGSEGDNTQLYEADQVEPLFLELLEKRVSDSDVE 875 Query: 922 QEMQQLA-----DRVIACRQPGQSMEI-------------------DLACNGV------- 950 ++QQ+ + + ++ V Sbjct: 876 SKLQQVLLSIEKQILKDWGGLFAEQSVTYGQLFEELWDTVPAIVGREVPFGKVPGEPDPS 935 Query: 951 ----------------QITGWLPQVQP---DGLLRWRPSLLSVAQGMQLWLE-------H 984 ++ G + ++ +G + + + E Sbjct: 936 QRQYQHLTLGTGTRETRVRGQIDRIDVGTINGQKYFNIIDYKTGRSVPSSTEIRTGKKLQ 995 Query: 985 LVYCASGGNGESRLFLRKDGEWRF 1008 L + + Sbjct: 996 LALYLIAARRL-GMIDADAEPFHL 1018 >UniRef50_A4WWS4 RecB family exonuclease-like protein n=41 Tax=Proteobacteria RepID=A4WWS4_RHOS5 Length = 1000 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 139/1083 (12%), Positives = 277/1083 (25%), Gaps = 186/1083 (17%) Query: 13 LEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDM 72 L + + + + V + M + + + L G + Sbjct: 28 LVRGLRARMAGAPPEA-MARVELYVNTQRMRRRV-VELMTAEGAGFLPRI--------RL 77 Query: 73 FVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAA 132 + P + +L L+ +L+E + R L F LS A Sbjct: 78 VTELPPVPGLPAPVPPLRRRLELAQLVARLIEAQPDIAPRSAL---------FDLSDSLA 128 Query: 133 DLFDQYLVY--RPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLY 190 DL D+ P+ +A+ ++ + WQ +A + + A Sbjct: 129 DLIDEMQGEGVPPEAIAR------LDVADHSAHWQRT--QAFMAIVAPMFGADAPDAQAL 180 Query: 191 QRFI--ETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYW 248 R PP P V + G + +QA+ + + L+ Sbjct: 181 ARMTVERIAARWAEAPPDHP--VIVAGSTGSRGTTALFMQAVARLPQGALVLPGFDFDLP 238 Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR 308 ++ D D +P +G Sbjct: 239 AEVWD---------------------------------GLGDALTAEDHPQFRFHRLMG- 264 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 + ++ + D P + + L + A V + + L Sbjct: 265 ------LVGAAPSQVHRWTDEDPPSP----ARNRLISLSLRPAPVTDQWLTEGQRLTDLA 314 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + P+ E + L E+ ++ +D + + Sbjct: 315 LAAEGMALIEAAGPRAEALAVAIILRKAAEDGRRA-----ALITSDRG-----LTRQVAA 364 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A + S R + L R E +L LL P+ A D Sbjct: 365 ALDRWGIVPDDSAGRPLALSAPGRFLRHVARLFGQRLTGEALLTLLKHPLTATGSDRG-- 422 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + +RW D L R + W Sbjct: 423 -----------NHLRWTRD----------------LELHLRRKGPPFPTGGDLDLWAGAR 455 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET--E 606 P D A+ L L+ L+ + E + Sbjct: 456 PDDGV----ADWARWLGGLIEGLDAVGNRPLSDHVAAHLALAEALAAGPAGTGTGELWLK 511 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 A + + E + L D + R + Q + I + Sbjct: 512 EAGEAARAAVEELRREAPHGGELTTADYTDLFDAILARGEVREAVQAHP--GLMIWGTLE 569 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA----LIS 722 R +V L G+NDG +P+ P + + + G +R + L A Sbjct: 570 ARVQGADLVILGGLNDGTWPQLPPPDPWLNRQMRLRAGL---LLPERRIGLSAHDYSQAV 626 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 A ++ ++ R+ + +E PS + L++ + G EAL Sbjct: 627 AAPEVVLTRATRNAE--AETVPSRWLNRLMNLMSGLKAQGGPEALEAMR----------- 673 Query: 783 LHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWA 842 + + A + A QP P+ + + ++ Sbjct: 674 -----------ARGRGWLALASALEQPEAPVPLAARPAPQPPVSARPDRLAVTGIRTLIR 722 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDA--ERLFRR 900 P + + L++ PD R I ++L V+ +R R Sbjct: 723 DPYAIYARHILRLYPLDPLHRAPD-------ARLRGSILHRILEEFVKDRAPGTDRAAER 775 Query: 901 FRAA--------GDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME----IDLACN 948 R ++P+ A ++ + + A +E +DLA Sbjct: 776 ARLMRIAETVLTDEVPWPAARALWLARLDRAADFFLETEAAHGGTPVVLEEEGRVDLAPL 835 Query: 949 GVQITGWLPQVQPDGLLRWRPSLLS-----VAQGMQLWLEHLVYCASGGNGESRLFLRKD 1003 +T ++ R + + + + L+ A+ L Sbjct: 836 RFTLTAKPDRIDRLPDGRLHILDYKTGTPPTRKQQEQFDKQLLLEAAMAEHGGFRKLGPT 895 Query: 1004 GEWRFPPL-----AAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAML 1058 R + +++ + L+ EG+ A + ++ Sbjct: 896 DVARISYIGLGSSPKVESVETDAALLGQVWEGLHALVGRYLRREQGYVSRRAMFGERFPG 955 Query: 1059 DDD 1061 D D Sbjct: 956 DYD 958 >UniRef50_A8STY9 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8STY9_9FIRM Length = 1303 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 94/894 (10%), Positives = 221/894 (24%), Gaps = 162/894 (18%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE----QDVGNPLLASWG 304 G ++ R R ++ + F G + VG+ + + Sbjct: 430 GRPVPSKAGREVSLRYREIFIDEYQDSNFIQEYILGSVAGHGENINNTFMVGDVKQSIYK 489 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPD--NLLHNIQSDILELENRAVAGVNIEEFSRSD 362 + + Q L + D + + N + E Sbjct: 490 FRMARPDLFIGKYNTYQRLGDDDKASADMIGNCIILTRNFRSEINVLRTVNALFEQLMRK 549 Query: 363 NKRPLDPLDSSITF---HVCHSPQR----------------------------------- 384 + D + + P Sbjct: 550 EIGGI-EYDDAARLNSKYALEDPHGRMSEPGDVYQGPKSELIMIDGDTVSGDMDEDYSCA 608 Query: 385 --EVEVLHDRLLAMLEEDPT------------LTPRDIIVMVADIDSYSPFIQAVFGSAP 430 E + + +++ +++ D + DI++++ + + VF Sbjct: 609 QIEAKYIANKIHEIVDGDDPMYIHDGDGTVRKVEYSDIVILLRSVSGSATVFDQVFEDE- 667 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 +P I + +S+LS+ D+ +V D+ A+L P++ + EE L Sbjct: 668 ---GIPIYIQSESGYFGAVEVSCLVSMLSVIDNSYVDGDLAAVLRSPMVG----MDEEEL 720 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 + G D + +L ++ G + + Sbjct: 721 ARIVGEYRTRYEIDGRDYNVRLYDKLIDYLENHDDEG----------QGECAGLDDMAKS 770 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 + G +L+G + + + L+ + + V +F+ Sbjct: 771 SAAIGDEDKLIGKVRAFVGMLDYLKENKNFMSLSDIIRYVLDQTGFYWFVGARPMGRRRQ 830 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL-AGPVNICTLMPMRS 669 + G + + + LD V + T+ + Sbjct: 831 ANIDMLIKKADDFEKNSKGVFNFIRYVNELKTNSLDFAEADIVSDNDDVVRVMTMHKSKG 890 Query: 670 IPFKVVCLLGMNDGVYPR----------------------QLAPLGFDLMSQKPKRGDRS 707 + F V+ + G+ + L + Sbjct: 891 LEFPVLFVAGLGKSFNMKDVQKKVLVHQQYYLTASAIDADARVKRDTFLRNVMASEMRVE 950 Query: 708 RRDDDRYLFLEALISAQQKLYISYIGRSIQD----------NSERFPSVLVQELIDYIGQ 757 ++ + AL A++KLY++ +S+ SE + L+ G+ Sbjct: 951 NYAEELRVLYVALTRAKEKLYMTGCPKSLDKFKENCGIYAIGSEMSSAALIN------GK 1004 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH 817 S AL+ + E + + + D + S E L K Sbjct: 1005 SFLSWIYTALSYIDHEEFLDVNEIKSSDFVHTDAVSLTSKTENSDEMEILDETEGLDKEV 1064 Query: 818 SEFVQ--------PLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 E ++ + L + + +++ A + R P Sbjct: 1065 FEQIRKGIDFRYGHVSSGLKSKMSITEIKKLQAMYDDT--EYIDMGRERKYAERKSAPAP 1122 Query: 870 FILEGL------SRYQINQQLLNALVEQDDAERLF----RRFRAAGDLPYGAFGEIFWET 919 + G + +++ + E R G G +I + Sbjct: 1123 KFMSGEKTIAGNEIGTVYHKIMELADFRQTTEAGIYADVERIFGLGLFDDGYREKIKADK 1182 Query: 920 QCQEM-QQLADRVIACRQPGQ------------------SMEIDLACNGVQITGWLPQVQ 960 + + L R+ A G E D + + G + Sbjct: 1183 IVKMLGSSLGQRMAAADLRGDLYRERQFYMMMTPGEILGRSEKDKTDETIVVQGIIDAYF 1242 Query: 961 PDGLLRWRPSLLSVAQGMQL------WLEHLVYCASGGNGESRLFLRKDGEWRF 1008 + + + + L A + + +++ + F Sbjct: 1243 IE-DGQIVLMDYKTDSVKKSEELVRKYHVQLDKYADVLEQLTGMKVKEKIIYSF 1295 >UniRef50_C0XV86 Helicase n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XV86_9CORY Length = 1018 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 96/905 (10%), Positives = 213/905 (23%), Gaps = 150/905 (16%) Query: 139 LVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLE 198 L+ + A W L AL P A + F+ Sbjct: 122 LISGAEQDAAIRQLLQGHAEDGRGTWPEQLRPAL---------PMVGFARQLRDFLLRAV 172 Query: 199 SATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWG-DIKDPAYL 257 P L + G P++ A L ++ ++ L NP R+ ++ Sbjct: 173 ERQLTPDALRNL----GKVHNRPIWSAAGDFLDEYQQVMAL--NPARFVSASELVSSVLR 226 Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL-LASWGKLGRDYIYLLSD 316 ++ R +D + E +L VG L + + G + Sbjct: 227 GEIEQRWHTVVVDDAQHLAPAAGELVRRLVERASLGVVGGDLGQSVFRFRGASPRFF--- 283 Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITF 376 L + ++++L A + Sbjct: 284 ----------------ANLAGLPHEVIDLGESRRAPIAQAA------------------- 308 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 VC S + ++ D + E + R++ V+V S A +P Sbjct: 309 -VCDSAAAQNSLVADTVRRAHLEG-GVAYREMAVIVRSASSIESV-----RRALLHAGVP 361 Query: 437 YAI-SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 + ++ A I L + S + LL P + + R Sbjct: 362 VMVNPTDVVLSEQRIVAALILGLRALEGELSSAEWRELLLGP------VGGTDPVTLRRL 415 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 G ++ L +T + + + + Sbjct: 416 LRGLRRWEPGERAEDTLRHLLRSTQPLPDFGVVLTERELSILNHVREVLDAGRAELAHGS 475 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 + L ++ + + + Sbjct: 476 IEDVLWAVW------------------NATGLANHLLIAALRGGATGSQADRDLDSVMAL 517 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRL--DQERISQRFLAGPVNICTLMPMRSIPFK 673 + A G V + +++++ R + V + T F Sbjct: 518 FDAAGDYVERRVGGSDV--AGFVAHISEQVLPTGVRDRRTATPDAVAVLTAHGAVRCEFH 575 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD------------RSRRDDDRYLFLEALI 721 V + G+ + +P + D R +++ LF A+ Sbjct: 576 TVIVAGVQEMQWPSLAETGTMFGQEELVDLVDNDVDPAVPVSRKAERLAEEKRLFDVAVS 635 Query: 722 SAQQKLYISYIGRSIQDNSE-RFPSVLVQELIDYI----------------GQSHYLPGD 764 A ++ ++ + D E PS V++ Sbjct: 636 RATHRVLVTAV--DEPDGEEVIQPSRFVEDFCTTHDIAPACVTTASTSASPAAGAEEVTA 693 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 + + + + A + +E Sbjct: 694 VRVLARDDVIAELRRALNDSGIGEAGRRQAARQLARLADAGVPGADPEEWWTTTEAASHE 753 Query: 825 PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL 884 +PE + ++ A P+R Q + ++ + + Sbjct: 754 ALAVPERLSPSRIESLLACPMREVLQRMVGLDSSL--------------HMVWGSMAHAY 799 Query: 885 LNALVEQDDA---ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSM 941 A+ D R + D E +Q+ + R + + Sbjct: 800 FEAVGRGVDETFARNAVLEARRSVDDAPQWKVEREIAEFEAMLQRAHRWLQTSRSAFEQV 859 Query: 942 EIDLACN-----GVQITGWLPQVQPDGLLRWRPSLLSV------AQGMQLWLEHLVYCAS 990 ++ + G+++ G +++ DG L + + Y + Sbjct: 860 AVEADIDVEISPGLRVVGRADRIERDGSGALHIVDLKTGSGVPSKDDAEANPQLEAYQLA 919 Query: 991 GGNGE 995 G Sbjct: 920 LSRGA 924 >UniRef50_Q0G5V0 Helicase, UvrD/Rep family protein n=2 Tax=Aurantimonadaceae RepID=Q0G5V0_9RHIZ Length = 1211 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 143/1075 (13%), Positives = 264/1075 (24%), Gaps = 215/1075 (20%) Query: 50 LSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFT 109 L+ GI N D + VL IP + ++ L + +++ Sbjct: 230 LADALGIDPNTD--------EAAIISVLGPIPGLDPSTCE-----IVRHLAERSDKKTDQ 276 Query: 110 LLRHYLTDDS---DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQA 166 L L D + D + L + + Q R + TG + L E A Sbjct: 277 RLAESLPDLAAAADPLERLALLKQI--VMTQAGGRRASVATKVVTGE-LPDLDERVAEAQ 333 Query: 167 PLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQA 226 + + L R RA L + LE R+ + L Sbjct: 334 EYVETAEDRLAALKLFRASRAALV--IADALERDYALLKRRRGRL---DFTDLIARTADL 388 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 L +H KL ++ + R + QL Sbjct: 389 LTRSEAASWVHY--------------------KLDQGIDHILIDEAQDTSPRQWQVMRQL 428 Query: 287 FNS-----------DGEQDVGNPLLASWGKLGRD--YIYLLSDLESSQELDAFVDVTPDN 333 + VG+ + + G L + ++ +A + TP Sbjct: 429 VDEFFVGRSTHNRTRTVFAVGDEKQSIYSFQGASPHMFDLERRVVKAKADEAGLKFTP-- 486 Query: 334 LLHNIQSDILELENRAVAGVNIEEFSR---------SDNKRPLDPLDSSITFHVCHSPQR 384 ++ LE A + E D + + + Sbjct: 487 --VSLNQSFRTLETVLGAVDQVFEAPENRRGLSTGGERPTHTSARQDGEGLVEIWPTIRA 544 Query: 385 E------------------------VEVLHDRLLAMLEED-------PTLTPRDIIVMVA 413 E + + D++ L + L P D++++V Sbjct: 545 ESTVEPDNWLDPMDEEPKSSPAYRLAQRIADQIAEWLGDPIVEKGRIRPLDPGDVMILVR 604 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 ++ P + A A +R + A +DR H ++ I+L + + + AL Sbjct: 605 KRTNFIPAMAA----ALRERGISVAGADRLTITEHIAVQDLIALGRVAANFEDDLSLAAL 660 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 L P+ F+ T++ L L L GL ++ Sbjct: 661 LKSPL----FEFTDDELMAL---------------------ALSRGPLEHLSAGLRKLGG 695 Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD 593 + P A L+ + +L+ R E Sbjct: 696 EEGPGRVPDWFPDGEP-------AARLLEKAHHAIERLDELRNRTG----FESVFTFYAR 744 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 +L A + L L +L + + Sbjct: 745 ILGPEGGRSKLMARLGRDTADVIDAFLDLALSEDTAGVSGLDAFLSDLEAAPPEIKREME 804 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLG--------------MNDGVYPR--QLAPLGFDLM 697 G V I T + + VV L+ M PR GF Sbjct: 805 GGRGEVRIMTTHASKGLEAPVVFLVDPGSAPFHGSHGSRLMRWEEMPRLLADQAPGFLWR 864 Query: 698 SQK----------PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 + K + + ++ R L + A ++L I + R PS Sbjct: 865 AAKEVENSAIAALREIEKQRAEEEYRRLLYVGMTRAAERLVICGMA------GTRGPS-- 916 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 + + +T + + + R Sbjct: 917 --------------EEAWREKVESALKPHAEEITDMAGDPVCWRIGSRRMGKPETERPDA 962 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT 867 + S + + P T P F A + + S + T Sbjct: 963 ANLAVRALDLSRLEEEVAPPRPLT-PSSAGAAFEADELESSVLEEQNTAETAYASPVLGT 1021 Query: 868 EPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL 927 G+ R + +LL L +E R A G+ + +Q+L Sbjct: 1022 AATPSLGIQRGLVVHRLLQHLPT-LASEERERAAEAYVRRALPQVGDTHRKQLLASVQRL 1080 Query: 928 AD--RVIACRQPGQSMEIDLAC------NGVQITGWLPQVQPDGLLRWRPSLLSVAQ--- 976 D A G E+ +A + G + ++ + Sbjct: 1081 MDDPAYAAIFAEGSRAEVAIAGTVRIGRTNYAVNGTIDRLVVTDR-DVLIVDYKTNRPPP 1139 Query: 977 -----GMQLWLEHLVYCASGG------NGESRLFLRKDGEWRFPPLAAEQALHYL 1020 + ++ L + L +G F L L Sbjct: 1140 QTLAEVPKDYVRQLAIYRALVMQLYPHRPVRTALLFTEGP-HFIALDEAMMEGAL 1193 >UniRef50_C5BZ31 UvrD/REP helicase n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BZ31_BEUC1 Length = 1136 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 105/891 (11%), Positives = 202/891 (22%), Gaps = 168/891 (18%) Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 AL + PA T R ++ + L Sbjct: 256 FAALKSERSVLDFADQVALAARIARDVPAVGEAERTSARVVLLDEYQDTSVAQLRMLRGL 315 Query: 287 FNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD--IL 343 F VG+P +G G LL ++ + +L + ++D IL Sbjct: 316 FGGGHPVTAVGDPHQGIYGWRGASAGSLL-AFDTDFPRADGTPASRAHLTTSWRNDRAIL 374 Query: 344 ELENRAVAGVNIEEFSRSDNKR---------------------------------PLDPL 370 + NR + + + + D Sbjct: 375 QAANRVARALRLADEDAAPAVPDEAGESGTAGEAGAAGDEASTPPGPDLVPPLAARPDAG 434 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 + E + L V+ D + P +A Sbjct: 435 RGEVRSAFAAHRPEEAATIAAFLADRWRPGRGTA----AVLCRKRDLFEPV-----RAAL 485 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 +PY + P + + L + ++ LL P +A L Sbjct: 486 EAAGVPYQVVGLAGLLRTPEVTDVRAALQAAYDPSRGDALMRLLTGPAVAL----GPADL 541 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 L + +R DDD R + L ++ + Sbjct: 542 VALADAASARTVRRAGDDDAGRGGRREPAEAASIVEVLDQLPPPGWVS------------ 589 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERP-LEEWLPVCRDMLNAFFLPDAETEAAM 609 L E L L QL R P L + + +A A Sbjct: 590 PSGRSLSDEGRARLVGLAAQLRRIRGVAHLPMPDLVTATEEILGLDVEVAVHEARAGAGG 649 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER----ISQRFLAGPVNICTLM 665 + L L + ER V + T+ Sbjct: 650 RARANLDELAAVAAEFDAGAALATLGAFLAWLDAAEEHERGLEAAHVEPDPAAVQVLTVH 709 Query: 666 PMRSIPFKVVCLLGMNDGVYPR------------QLAPLGFDLMSQKPKRGDRSRRD--- 710 + + + VV + G+ +G +P L + + D Sbjct: 710 ASKGLEWDVVVVAGLTEGDFPAVDGGANGVRSSAWLTGVAELPYPLRGDVDHLPELDVIG 769 Query: 711 -----------DDRY-------------LFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 ++ L A+ A+ L ++ + + PS Sbjct: 770 PVTHKDMDVAREEFRSAAGERELLEERRLAYVAMTRARHVLLLTGSWWGTRK-TTLTPSR 828 Query: 747 LVQELIDYIGQSHYLPG---------------------DEALNCDESEARVKAHLTCLHT 785 ++E++ P A + ++ + + + Sbjct: 829 FLREVVADGSAVPLPPPWGGTLDAAPAEAAPAEPARAMWPAEPGGATAQALRDAASGVRS 888 Query: 786 RMPF--DPQNYQPGERQSYAREWLPAASQA--GKAHSEFVQPLPFTLPETVPLETLQRFW 841 + D + +PG S ++A + + + LP P + + + Sbjct: 889 WLAAGSDRLDLEPGAEPSARAREWLWQARALLDEREAAAGEALPADPPGHLSASAVVQLA 948 Query: 842 AHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRF 901 P AF + R + + R + + Sbjct: 949 RDP-EAFARARRRPVPAEPNP-----------NARRGTRFHAWVEQHFAAAALLDVDDLD 996 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC-NGVQITGWLPQVQ 960 A D F LA A +++ +G + + V Sbjct: 997 DEATDADLDVLRRAF----------LASDWAARTPIAVEADVETPLRDGTLVRCRIDAVF 1046 Query: 961 PDGL--LRWRPSLLSVA-----------QGMQLWLEHLVYCASGGNGESRL 998 P + +QL L L + G R+ Sbjct: 1047 PGRRSGQEVHVVDWKTGTPAADRSAREAREVQLALYRLAWSRLHGVPVERI 1097 >UniRef50_UPI000196B4E2 hypothetical protein CATMIT_00994 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4E2 Length = 1181 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 68/841 (8%), Positives = 184/841 (21%), Gaps = 173/841 (20%) Query: 239 LFTNPCRYYWGDIKDPAY--LAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE---Q 293 L + Y + P + +L + ++ + ++ N D Sbjct: 371 LDFHDLEEYATRLLQPDLPVVERLNHTLKEIMVDEYQDTNEMQENLVLKIANYDEHIPMF 430 Query: 294 DVGNPLLASWGKLGRD---YIYLLS---------DLESSQELDAFVDVTPDNLLHNIQS- 340 VG+ + + D + Y + +++ +D + + ++ + + Sbjct: 431 MVGDMKQSIYRFRQADPSIFQYKFDTFTKLEEMTEYDTNIRIDLKYNYRSEKVVLDSVNY 490 Query: 341 -------------DILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR--- 384 + + +N + + + D+ I + + + Sbjct: 491 IFDCIMDSSVGGLEYIHGDNAILRYDFDAKGTTLPELEKNHDFDTDILISLYKNQEEYTK 550 Query: 385 ---EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD 441 E ++ ++++M ++ D V++ + + + VF + Sbjct: 551 SEVEAHMVAQKIISM-KKLKDYKYHDFAVLMRATTEFITY-KKVFERYHIPANITL---- 604 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 + + ++LL + + + L Sbjct: 605 SSGLFESNEVISMMTLLKALVNP----------------------YDDIAML-------- 634 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 + T L ++ + L Sbjct: 635 ---------------SVLHNNFLFSHFTENELLDIRDADDPLY---------INLTHHTN 670 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 + L + R P E ++ F+ + Sbjct: 671 SKVLHFLEVFDDLRNTAMTSSPYETLKKCLKETGYQAFVSQLMNGEQRSANLDILLETFR 730 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQER-ISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 + L + L Q V T+ + + F VV + M Sbjct: 731 -----TNEEYPYLKDYLELLDSSSSQAPGFIASDENDAVEFMTIHKSKGLQFPVVFVSAM 785 Query: 681 NDGVYPRQLAPLGFDLMSQ----------------------------KPKRGDRSRRDDD 712 + +++ Sbjct: 786 QKKFNSSDENAEIIISQHDGVAGSVCKLEESPFGNIVCKYEHPYSKMLKMFIRQETVNEE 845 Query: 713 RYLFLEALISAQQKLYISYIGRSIQD-------------------NSE-----RFPSV-- 746 + AL A++KL ++ + ++ S Sbjct: 846 MRILYVALTRAEKKLILTGTIKDEEEIISIARQVQANDTDPTLKKGQGVVYNLAMRSTNN 905 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW 806 + ++ + + D + E + + D Q + + E Sbjct: 906 YLSWVLMALLRHKDFQEDIKILIPEIRPYLSLDRSSFKELENKDTQLARFHCTILDSSET 965 Query: 807 LPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 + K E + ++ P ++ + + Sbjct: 966 VQRIPPYAKIKIENQYRAYKKYYDFEYPYPVE-----PRSIAVTSMEEMKSDDTHFDFSN 1020 Query: 867 TEPFILEGLSRYQINQQLLNAL-VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 L R + LL+ ++DD E L + + + Sbjct: 1021 EGTRYL-ATDRGTLVHNLLSYFNFKEDDPEELIQSLYTNQMFDEEGLS--VLKNYLPHIN 1077 Query: 926 QLADR-----VIACRQPGQSMEIDLACN-GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ 979 + + Q Q + G+ I G V + + + Sbjct: 1078 DFINSDTYQLIKDADQIYQEKQFRYKDENGLIINGIFDLVFIKDNKVY-VLDYKTDRVSK 1136 Query: 980 L 980 Sbjct: 1137 D 1137 >UniRef50_UPI0001AF17D7 superfamily I DNA/RNA helicase n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=UPI0001AF17D7 Length = 921 Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats. Identities = 93/858 (10%), Positives = 197/858 (22%), Gaps = 177/858 (20%) Query: 175 YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHI 234 + RW + LYQ+ + L GL V G+ Y+Q L Sbjct: 136 KGAEKPLRRWVNSKLYQQVMAILREDDVDLDGLRPDV-ADGL----DKYMQLLSDRAYFD 190 Query: 235 EIHLLFTNPCRYYWGDIKDPAYLAKLLTR------QRRHSFEDRELPLFRDSENAGQLF- 287 +L D D + L + + ++ + + L Sbjct: 191 YTAILHNAA--VLLNDDNDEGDESVLDLQRHVKETVKYVVVDEYQDTNPVQEQLIRGLTR 248 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLL---SDLESSQELDAFVDVTPDNLLHNIQSDILE 344 + VG+ + G +L + + + + + ++ Sbjct: 249 HGANLCVVGDDDQTIYQWRGSAVDNILTIEDRYPNVHRVTLNENFRSSSAIVDLA---RH 305 Query: 345 LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 + R AG + + + + + D + + E L +R+ + + Sbjct: 306 VVERIPAGERLNKAMTAAGHQTFERGD--LLAQEFPDTEAEATWLVERMERL----RGVP 359 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSR 464 D + + F +D L Sbjct: 360 FHD-----REGSEPRGLDWSDFAVLFRS-----VKADAGPLVEE---------LRSRGIP 400 Query: 465 FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTW 524 +V + + L + P + A V L W Sbjct: 401 YVIKGLTKLFETPEVQAAVTC----------------------FRFVAGLADEQDVVDAW 438 Query: 525 RFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 + G ++ L G L + L +ER Sbjct: 439 VDAGVGLAEGDVRAGLPVLTAAMQWDASKPWDSTTLQGVFLEFLEAV-----ELREERVP 493 Query: 585 EEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR 644 E + L F + E + + Sbjct: 494 NERGELVYYNLGRFSTAIGDFERIH----------------LTSEPQQRFDAFAKWVEHQ 537 Query: 645 L-----DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG--FDLM 697 + + + V I T+ + + + V L + +P F ++ Sbjct: 538 APDYYEESDGDNGYAQPNAVVIATVHQAKGMQWPAVFLPALRKNTFPASGRGGLGVFHVV 597 Query: 698 SQKPKRGD---RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 ++ G R D+R LF A+ AQ+ L +S+ + +R S E Sbjct: 598 EEELIPGAARYRGTEADERRLFYVAVTRAQKYLALSFAPSDKRTGKKR--SDFFNE---- 651 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG 814 V Sbjct: 652 ---------------ATGVHTVLTREVIPSPDD--------------------------- 669 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 P T + L+ + P ++ + + Sbjct: 670 ---RLTPTPRRGTPEVVMSFSDLKYLFECPYSFKLRLLYGFDSPLQKE------------ 714 Query: 875 LSRYQINQQLLNALVEQDD------AERLFRRFRAAGDLPYGA--FGEIFWETQCQEMQQ 926 L + ++ + ++ E +LP+ + +++ Sbjct: 715 LGFGKSLHDVMAEIHKRAIEGDIATPEEAEDLVDRHLNLPFANKAAADQLRPAAETAVRR 774 Query: 927 LADR----VIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW- 981 +R + R Q +EI GV +TG + ++ ++ Q Sbjct: 775 YLERHGATLHQTRYSEQPVEIH-PVPGVTVTGRVDLIKRLDTNETSVVDFKSSERAQAED 833 Query: 982 --LEHLVYCASGGNGESR 997 + L G + Sbjct: 834 LTRDQLHLYVLGYRELTG 851 >UniRef50_UPI0001AEBA9E UvrD/REP helicase n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBA9E Length = 701 Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats. Identities = 54/576 (9%), Positives = 138/576 (23%), Gaps = 118/576 (20%) Query: 193 FIETLESATTCPPGLPSRV-FICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDI 251 I+ L++ + + A + +L + ++ L + + Sbjct: 180 LIDILDTHFPYCSEWEEELNTLFAHYAKTKIEQVSLD----YDDLLLYCFHMAQV----- 230 Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDY 310 A K+ + ++ + + F +G VG+ + + Sbjct: 231 --DAIAQKVREQFDNVLVDEYQDTNVLQAGILKGFFPTGEGLTVVGDDAQSIYSFRSATV 288 Query: 311 IYLLSDLESSQELDAFVDVTP-DNLLHNIQSDILE---LENRAVAGVNIEEFSRSDNKRP 366 +L+ F + +Q + + N + ++ + + Sbjct: 289 DNILN----------FPTAFSLPGKVITLQQNYRSHPNILNLSNTLLSESDEGYKVSLFS 338 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 + + + E + +R+LA + + + V+ + Sbjct: 339 ERKSGPMPKWITVENDMFQAEYIVERVLA--AREEGIDLKQQAVLFRS-----SYHSDRL 391 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 R +P+ ++ + +L D+ + L I Sbjct: 392 ELELTRRNIPFVKHGGLKFLEASHVKDMLCILRWADNPKHKISAFRV-----LKLLPGIG 446 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 + + + + G Sbjct: 447 PKIAERVFNDLEKHDFALGK---------------------------------------- 466 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 S L SL+ L+ P E + + Sbjct: 467 ----LRSFALSESAKPSFLSLVDLLDNVH---HNNIPWTEQTSAIAAFYKDLLEANYDDH 519 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA----QRLDQERISQRFLAGPVNIC 662 +Q I + EL Q + + Sbjct: 520 FTRFGDIEQLTMISGQYSSR--------ERFLTELTLDPPQSTGDLAGKPLLDDDFLILS 571 Query: 663 TLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 T+ + +K V +L + DG +P + GD+ +++R L A+ Sbjct: 572 TVHSAKGQEWKHVFVLNVADGNFPN------------EYAAGDKRALEEERRLLYVAITR 619 Query: 723 AQQKLYI-----SYIGRSIQDNSERF---PSVLVQE 750 A+ +L + ++ + + S + Sbjct: 620 AKDELSLVQPLKYWVPEQQKFGDKHVYGAKSRFFTD 655 >UniRef50_Q5YR01 Putative helicase n=4 Tax=Corynebacterineae RepID=Q5YR01_NOCFA Length = 1255 Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats. Identities = 70/655 (10%), Positives = 148/655 (22%), Gaps = 92/655 (14%) Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 D LA +L D + L + + + R Sbjct: 605 DGADELADARPDLLTDESDWRDTDLDWGLEVAEVADDSAAWQQAGGRIAPTDDPAPAGPA 664 Query: 526 FGLTRMLLGYAMES-AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPL 584 R L+ + +G GL L +L L+ R + L Sbjct: 665 ADDHRGLIDQSSAEVLRGLLVGAADPALLDGLTEVESAPLRRVLRALDRARAARRRGAGL 724 Query: 585 EEWLPVC-------RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 E+ L R + A A ++ A + Sbjct: 725 EDVLWALWTASRLERRWVAQSERGGAVGMQADRDLDAAVGLFDAAAAYVDRLPRAGIEGF 784 Query: 638 RDELAQR-LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + L+Q+ + + V + + + VV + G+ +G++P Sbjct: 785 VEYLSQQEIPHDTRPLTTPGEEVALLSAHAAAGREWDVVAVAGVQEGIWPNPRPRGTLLH 844 Query: 697 MSQKPKRGD------------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 ++R L L A A++ L ++ S+ + + P Sbjct: 845 TEDLVDLLAGVGGAGEHVSRSAPILAEERRLLLVACSRARRSLLVT-AVESVTGDRDLVP 903 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 S + EL+ + P + AR Sbjct: 904 SRFLAELLGHDEDGEPGVLPVVDPGRALVMHSLVAELRGAVCDPTADPERRRRAAFQLAR 963 Query: 805 EWLPAASQAGKAHSEFVQPLPFTLPE---------TVPLETLQRFWAHPVRAFFQMRLQV 855 L P + T+++ P+R + Sbjct: 964 LADAGVRGTAPEEWYGTAELSCADPLWSEEDDAVVALSPSTVEQLRTCPLRWALERHGGT 1023 Query: 856 NFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE---RLFRRFRAAGDLPYGAF 912 + + + L+ AL + + A D G Sbjct: 1024 DGDNP-------------HAVKGSLVHTLVQALAGRVPEAQVRAALDKAWRAIDPGDGWH 1070 Query: 913 GEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN-----------GVQITGWLPQVQP 961 ++ V R +++ + V+I G + +++ Sbjct: 1071 SRQERRRTEAMLETFLAWVRNTRGELTQAGVEVPVDCVLPARSEDERPVRIRGRIDRLER 1130 Query: 962 DGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQA--LHY 1019 D R+ + + P++ + A Sbjct: 1131 DEFGRFVIVDVKTGK--------------------------------NPISKQAAADHAQ 1158 Query: 1020 LSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQA 1074 L+ G P + ++ + + D A + Sbjct: 1159 LATYQVAAASGALDPEGEPGGARLVYVAKPHTKEGATQRMQDPLDAAALDSWRDT 1213 Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 40/317 (12%), Positives = 76/317 (23%), Gaps = 34/317 (10%) Query: 142 RPDWLAQWETGHLVEG-LGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESA 200 P L E ++ L A A L A + + Sbjct: 139 PPRLLTGAEQDAVLREMLRGDLADIAEGATGLWPQRLHAALGLDGFAQQLRDLMLRATER 198 Query: 201 TTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRY-------------- 246 P L G P ++ A + L ++ + LL + Sbjct: 199 GLGPEDLERL----GREHDRPEWVAAGRFLLRYEQALLLRWSVGVEAPEATAPALDAAEL 254 Query: 247 ----YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDV-GNPLLA 301 D LA R R +D + + + + + V G+P A Sbjct: 255 LGACLDALATDAELLAAERARIRYLFVDDAQHLDPQAATLVRVVGAAAHTAVVAGDPDQA 314 Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 + G D + + + + + A + Sbjct: 315 VFTFRGADARFAADPGAPADRRVVLRENHRSGPSVRLAA-----ARIAAKLPGAAPHRPA 369 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 ++ V +P +E ++ D L + + V+V + P Sbjct: 370 VAAESGGGDGVAVRVRVLATPAKEAALIADHLRRAHLTG-GVPWSRMAVIVRSV----PL 424 Query: 422 IQAVFGSAPADRYLPYA 438 A A +P Sbjct: 425 SLAPLRRALLAAGVPVH 441 >UniRef50_C7GAA3 ATP-dependent nuclease subunit A n=2 Tax=Roseburia RepID=C7GAA3_9FIRM Length = 1237 Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats. Identities = 100/934 (10%), Positives = 220/934 (23%), Gaps = 142/934 (15%) Query: 72 MFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKA 131 +L + + S + ++S + L + + + L D +K K S Sbjct: 212 FMQSLLQNLKRVSE-DLVALSGRAYKLTQ---DDDGPDMYAKALEGDLEKYKEIAASESF 267 Query: 132 ADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQ--LGQPRWHRANL 189 AD Y YR + + +G E L K L E R + Sbjct: 268 ADF---YQNYRNLSYDRLASSRGFDGNEEKL----ELVKKLREMGKDAVKKINRQYFFTS 320 Query: 190 YQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWG 249 + E ++ L + + L + H H G Sbjct: 321 PEIMAEQMKKTAPMAAELVRLTLEFDETFTAEKRRKNL--VDFHDLEHFALNIFVDEETG 378 Query: 250 DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG----EQDVGNPLLASWGK 305 +K A + + ++ + + + VG+ + + Sbjct: 379 KVKKTAEEFR--DNFKEIMIDEYQDSNEVQETILRAISREERGEYNLFMVGDVKQSIYRF 436 Query: 306 LGRDYIYLLSDLE-------SSQELDAFVDVTPDNLLHNIQSDILEL------------- 345 + + Q +D + N + + +DI Sbjct: 437 RLARPELFMEKYDTYSLTDAKMQRIDLHKNFRSRNEVLDFSNDIFYRIMKRNLGNVEYDA 496 Query: 346 -ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR--EVEVLHDRLLAMLEEDP- 401 EE + L D + ++ E ++ R+ ++ Sbjct: 497 DAALYPGASYQEETDMFTPEILLVDGDDELLDDAAADDKKLLEARMIAKRIKELMGTQKV 556 Query: 402 ---------TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 + D+++++ + Y+ F + D +P S ++ Sbjct: 557 TDKATGELRPVQYSDMVILLRSLSGYAD----RFAAVLNDAGIPAHTVSATGYFSTVEVQ 612 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 +S+L + D+ + A+L P+ G+ D+ + Sbjct: 613 TVLSMLRILDNPRQDIPLTAVLRSPI-------------------------AGLSDEELA 647 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 +L L + L + E + +L Sbjct: 648 KLRLKDKNVRFYECVLEECERLKQEAEENP--------GQGRDDSEEKLYRFYVTYEKLR 699 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 +E L + + + + I Y Sbjct: 700 QLVPDTPIHELIELLLK--ETGYGDYAAAMPAGDRRHANLLMLVEKAI-AYENTSYKGLF 756 Query: 633 PLSLLRDELAQRLDQERISQ--RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY----- 685 DEL + + V I ++ + + F VV GM Sbjct: 757 HFVRYIDELQKYDVDFGEADLIGENENVVRIMSIHKSKGLEFPVVFAAGMGKNFNRQDTR 816 Query: 686 ----PRQLAPLGFDLMSQKPK-------------RGDRSRRDDDRYLFLEALISAQQKLY 728 +G D M K + + D ++ + AL A++KL Sbjct: 817 SRLVLHPELGIGLDYMDGKQRVKSVTIAKRAIAKQIDMENLGEELRVLYVALTRAKEKLI 876 Query: 729 ISYIGRSIQDN--------SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 ++ + ++ E + LP + ++A Sbjct: 877 LTGSLKKAEETLSYIKAFPEELL--SYLGRESAAGYLDWILPAAASCQDKYQIRLMRAAE 934 Query: 781 TCLH--TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQ 838 D N ++ + + + H + + L+ Sbjct: 935 LVQEELETQIKDDWNRSACMEKAAQADEKKVQQFSERFHRRYAYENDVQRKNKYSVSELK 994 Query: 839 -RFWAHPVR--------AFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN--A 887 R ++ + +E L R +++ Sbjct: 995 HRAMREAFEKEEEAVPVFQYEEVVPYVPAFAREIEQQSEDASPGAL-RGTAMHRIMECYQ 1053 Query: 888 LVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC 921 A+ + G I Sbjct: 1054 FSSGVSAKEQVAGMLEKEQITPEMHGLIRIPQVE 1087 >UniRef50_UPI0001C36633 recombination helicase AddA n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36633 Length = 1244 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 89/848 (10%), Positives = 209/848 (24%), Gaps = 161/848 (18%) Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD----GEQDVGNPLLASWGKLGRDY 310 A +L + ++ + + VG+ + + Sbjct: 401 AVADELSRQFEEILVDEYQDSNDVQETLIHAISRERFGTPNVFMVGDVKQSIYKFRLARP 460 Query: 311 IYLLSDLES-------SQELDAFVDVTP-DNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 L ES Q ++ + D++L I ++ + + G+ E + Sbjct: 461 ELFLKKYESYPREEGLYQTIELHQNFRSRDSVLSGINEVFYQIMTKGLGGILYTEDAALH 520 Query: 363 NKRPLDPL----DSSITFHV-------------------CHSPQREVEVLHDRLLAMLEE 399 +P + H+ S + E ++ R+ ++ Sbjct: 521 PGAVFEPTEETVGGKLELHLVNTGGIQLKQLEMESDALDYTSREMEARLIVSRMKELVNP 580 Query: 400 DPTLT-------------PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 + L D+++++ + ++ F + + +P R Sbjct: 581 ETGLKIWDKKEKRYRTACYGDMVILLRSLSGFA----EDFVNILMNEGIPAYAERRTGYF 636 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 + +E + LS+ D+ + A+L P++ A ++E L L Sbjct: 637 TAIEVETVLCFLSVIDNPMQDIPLAAVLKSPMVGA----SDEDLARLM------------ 680 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 R G W L EL LA Sbjct: 681 -------------------AVFKRTAKKGQDRGIYGAWLYYLENCPEEEREEELYRKLAL 721 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 +L +RR E + + ++ A + Sbjct: 722 FFDELAEYRRMAGYLSIHELLYVIYENTGYYDYVAAMPAGDARQANLDMLVEKASAYEKT 781 Query: 627 QYGDAVPLSLLRDELAQRLDQ-ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG-- 683 Y ++L + + V I ++ + + F ++ L GM Sbjct: 782 SYSGLFHFIRYIEKLKKYDTDFGEAALAGDGNTVRILSIHKSKGLEFPIIFLAGMGKKFN 841 Query: 684 ---------VYPRQLAPLGFDLMSQK-----------PKRGDRSRRDDDRYLFLEALISA 723 + P + + + +R + ++ + A+ A Sbjct: 842 KQDLYGKILIDPDLGIATDYLDLDLRVKTSTLKKNVLRRRLELEALGEELRVLYVAMTRA 901 Query: 724 QQKLYISYIGRSIQDNSER-----------------FPSVLVQELIDYIGQSHYLPGDEA 766 ++KL ++ R + ER + L+ + + Sbjct: 902 KEKLIMTGTDRYLDKKLERFSDIKRTAGQIPFTILSTADSFLDWLLMSLSGKLSESALLS 961 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 E+ + + + ++E L + + + Sbjct: 962 EAGVETGLMTVREYSVAD----LVGVEIEHQAEKKLSKEELLNFDCSRIYDEAYAAGISA 1017 Query: 827 TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFIL---------EGLSR 877 P + + + Q+ E + +P F++ G R Sbjct: 1018 AFSYHYPHTADIGLHTKLSVSELKKQGQMVDEEESTFLPTIPAFLMEENGKKEQGGGAFR 1077 Query: 878 YQINQQLLNALV-----EQDDAERLFRRFRAAGDLPYGAFGEIF-------------WET 919 + L L D E F + + + Sbjct: 1078 GTAYHRALELLEFPAMKTLADVETALETFHREKYMDEESLALLDAGIIWNFLSSPLGRRM 1137 Query: 920 QCQEMQQLA--DRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQG 977 + + L ++ P + ME+ + V I G + +G Sbjct: 1138 SAAQSKGLLYKEQQFVIGIPAREMEVCDSGELVLIQGIIDAYMEEGDGLVLI-DYKTDHV 1196 Query: 978 MQLWLEHL 985 ++ L Sbjct: 1197 VKGHESLL 1204 >UniRef50_UPI00016C0036 Recombination helicase AddA n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0036 Length = 1186 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 75/825 (9%), Positives = 191/825 (23%), Gaps = 178/825 (21%) Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIYLLSDL 317 +L ++ + + N VG+ + + + L Sbjct: 383 ELGKYYSEIYIDEYQDVNDVQETILSAIATNGATRFMVGDIKQSIYKFRLSNPKIFLDKY 442 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS------------------ 359 Q+ F ++ ++ + A I E Sbjct: 443 NRFQQ---FSPTAAADIRIDLSHNFRSRAIILDAANEIFERLMRPAVGDLIYDQAQRLYA 499 Query: 360 -RSDNKRPLDPLDSSITFHV-----CHSPQR-------EVEVLHDRLLAMLEED------ 400 R + + E ++ + +L+ + Sbjct: 500 GREYATFDETAKQCELHLLELSTLDADDAEEPSNKAELEAAMIAKIVKDILDGNSNPKIV 559 Query: 401 --------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 + PRDI ++V + + F +A + ++ +E Sbjct: 560 YDKDLDIYRAVEPRDIAILVR-----AKAVSTAFENALYKVGVDAYAEISKSFFEATEVE 614 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 I+ L + D+ L++L +L FD Sbjct: 615 LMINFLKIIDNINQDIPFLSVLHSSLLGLDFD---------------------------- 646 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 L + + + + Y + LA ++ Sbjct: 647 ------------------ELSEIRTYADGSFYNACVAYKQL-----HPHSKLADFFAEIE 683 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 +R+ E V ++ + A + + + + Sbjct: 684 GFRKLSKMVPVSELIDQVFLQTGYLGYVSMLDHGAIRSANLRILKQTAIDFEQNTKVGLF 743 Query: 633 PLSLLRDELA--QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN------DGV 684 + ++L + Q+ S V I ++ + + F +V L + + Sbjct: 744 NFLIFLEQLRNDEASIQQAKSAVDQNNTVKIMSIHKSKGLEFPIVILANAHKRFNQMETY 803 Query: 685 YP----------------RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 P + + ++ + AL A++KL Sbjct: 804 QPILLHNQLGLGAQFRDMEKYVDYTTLPYLAIKNKIFNENISEEIRILYVALTRAKEKLI 863 Query: 729 ISYIGRSIQD--------NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 ++ + S +E S+ ++ Y+ ES A A Sbjct: 864 VTAVTNSFDSLLSNALLHATEHIDSIFIRNQNSYLNWIILALAHNPYTLTESVANFNAGT 923 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 + ++ A + +E +Q + + +L+ Sbjct: 924 MGQWIIKQYSRLSFADA----------DADFVEPPSSNEVIQDIFDLIATDTSSNSLKDE 973 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPF--------------------ILEGLSRYQI 880 + ++ L + S +GLS I Sbjct: 974 IFAKLDYEYRHILDTTLPQKISVSELKTKMSDSISSAPYSSNIPKFIASSSYDGLSHGNI 1033 Query: 881 NQQLLNAL----------VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR 930 + L + Q+ + + A L + + ++ Sbjct: 1034 IHAVFQHLDYLKYTDHTSIRQNIESMIAQNKLAKNTLAIANIDRLVSFANSAIINRMRKA 1093 Query: 931 VIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVA 975 + ++ ++ + I+G + + + Sbjct: 1094 AFSFKEQPFLYQLPQSEGRSLISGIVDAYFEE-NGKIIIIDYKTD 1137 >UniRef50_B0NWV2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NWV2_9CLOT Length = 1188 Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats. Identities = 79/944 (8%), Positives = 222/944 (23%), Gaps = 174/944 (18%) Query: 151 TGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSR 210 + + E Q + Y + L + GL Sbjct: 283 RKKKTDEIDEMLQDQCKYERN-QAYNLLDDLKAAYFYENESEIFHELRRIKSPLKGLIDL 341 Query: 211 VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFE 270 I + + L G+ + + Sbjct: 342 TRKFMIRYDEKKKNENIMDFDDMEHFALELLIDHYDEEGNPVPSKIAREKSDGYEEIYID 401 Query: 271 DRELPLFRDSENAGQLFNSDG----EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAF 326 + + + + VG+ + + L + Sbjct: 402 EYQDSNYIQDAILRSVSKESEGGHNMFMVGDVKQSIYSFRLARPELFLEKY------HGY 455 Query: 327 VDVTPDNLLHNIQSDILELENRA--------------VAGVNIEEFSRSDNKRPLDPLDS 372 + L ++++ + + + + Sbjct: 456 QQKGEEYQLIELRNNFRSRSEVLTFVNDVFYQIMHEDLGNIEYTQNVALVPTMEFEQGCD 515 Query: 373 S------ITFHVCHSPQR-----EVEVLHDRLLAMLEEDPT----------------LTP 405 + + + + E ++ R+ M++ + Sbjct: 516 AQTELLLLESNEVKDSEEDAVILEARMIATRIHEMIDGEDPMMVTGKDEEGNMILRKAKY 575 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 DI++++ + + + IQ + +P ++++ + +SLLS+ D+ + Sbjct: 576 SDIVILLRSMKTNAEVIQK----ELMNAGIPAFANNQKGYFDTVEIRTLLSLLSVVDNIY 631 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 + D+ A+L P++ Sbjct: 632 MDIDLAAVLRSPMIGM-------------------------------------------- 647 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 + ++ + + E LL L + L + + Sbjct: 648 -SEEELGRLKVDGEKDSLYECLCETKDK----MEKSKKALELLDLLRDAKTYLPLTQLI- 701 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 WL + + + + + I + +Q ++ + Sbjct: 702 -WLALEKSGYYHYAGAMPQGKKRQGNILMLVEQ-AKAFESSQIKGLFHFVRFIEQCREYD 759 Query: 646 DQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN---------------------- 681 E + V I ++ + + + +V + ++ Sbjct: 760 MDYGEANTMSEDQDLVRISSIHKSKGLEYPIVFVSKIHQKFNLRDGNGSMIFHGDYFIGA 819 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD--- 738 D + P L + + R ++ + A+ A++KL ++ I + D Sbjct: 820 DHIDPVYRTRKKTILKNLIKNQMTRESLGEELRVLYVAMTRAKEKLILTGIKKDDIDWNA 879 Query: 739 -------NSERFPSVL--VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 + S +++ + I + Y L + L ++ ++ + Sbjct: 880 KGEVTAIDRLSGRSYFDWIKKALPMIPKQDYRLKIYTLEDLLWQQEGNELLHEMNRQIFY 939 Query: 790 DPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 + N Q A + A +A ++ + + + + Sbjct: 940 ERLNDQIPNENVKALKESFAYHYRNEAETKGRLKYSVSEIKRMSQAADTE------EVMY 993 Query: 850 QMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL-----VEQDDAERLFRRFRAA 904 + S + TE + S+ I ++ L R+ + Sbjct: 994 SSVFMEKEKRIPSFVKKTER--ISAASKGTIIHKVFELLDFSKDYTMKSLNEDIERWISL 1051 Query: 905 GDLPYGAFGEIFWETQCQEMQQ---------------LADRVIACRQPGQSMEIDLACNG 949 G L I+ + + +R P M+ + + Sbjct: 1052 GKLKKEYEKVIYRKEILALTRSELGKRMKEAAQKKLLYKERQFVTGIPFSDMDKEAKTDD 1111 Query: 950 -VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGG 992 V + G + + + + + L+ Sbjct: 1112 FVVVQGIIDVYFEEEDKIILV-DYKTDRVREGEEDILIRRYRAQ 1154 >UniRef50_A6BJS6 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJS6_9FIRM Length = 717 Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats. Identities = 73/562 (12%), Positives = 164/562 (29%), Gaps = 108/562 (19%) Query: 263 RQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLG--RDYIYLLSDLES 319 R ++ + E L + VG+P + G ++ +LL + Sbjct: 222 RPEWIIVDEVQDSDRSQLEFLEALKGPETKIFAVGDPNQVIYSFRGTTQNMFFLLKNRFQ 281 Query: 320 SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVC 379 ++EL V+ + + + L+ + + I Sbjct: 282 AKELSLPVNYRSNASILEAANRFLQF---------------GGKIQGSNECGEKIQIRNH 326 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 + P +E L D++ + +E RDI V + A++ +PY + Sbjct: 327 YDPFQEAMYLADKIWTLHQEGK--EYRDIAVFYRLQKQ-----AEILEKMFAEQNIPYEV 379 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 S +++ + PVL + +L + + +L Sbjct: 380 SVKKSWKDIPVLNWLMYVLRFATHPDDIQAGMQVLM------------------------ 415 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES---AQGEWQSVLPYDESSGL 556 R+G + ++ + M+L Y + + + S+ + Sbjct: 416 -DKRFGDKCTKKKAEDIIKNHKTEKSDIYKNMMLFYTEKEVLSGEDIFDSLGLKEALHPT 474 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 A+ +L LN +++ R+ LN L E+ Sbjct: 475 SADYQQDAKQVLDFLNQICTYSREKKL--NMSDGIREFLNGMALGTIESPED-------- 524 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 QE + G V + TL + + F V Sbjct: 525 -----------------------------TQESAEKEEAGGRVKLMTLHASKGLEFDTVF 555 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 ++G+N G+ P + + + +++R LF + A+ L +SY Sbjct: 556 IIGVNPGLLPIRCSSF--------------DQEEEERRLFFVGITRARNHLELSYYTNPG 601 Query: 737 QDNSERFPSVLVQELIDYIGQSHYL--PGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 + S ++ + + + + + ++ N E R K + + + Q Sbjct: 602 EPGVLGSYSNYLKMIPEELLEWKEIRSDEEKRTNLKELTRRAKEEIRKAEAQKAENVQEQ 661 Query: 795 QPGERQSYAREWLPAASQAGKA 816 + ++ + A Sbjct: 662 KTESEKTENVQEQKAIHPKYGT 683 >UniRef50_C0CLZ2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0CLZ2_9FIRM Length = 608 Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats. Identities = 62/510 (12%), Positives = 144/510 (28%), Gaps = 96/510 (18%) Query: 248 WGDIKDPAYLAK-LLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGK 305 W +++ + + R ++ + + L VG+ + + Sbjct: 187 WELLRERTDIRRAWQERFPYILVDEFQDINPVQYDVIRLLAEPRKNLFIVGDDDQSIYHF 246 Query: 306 LGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL---ELENRAVAGVNIEEFSRSD 362 G Q + F P + + E+ N A+ + + Sbjct: 247 RGA----------RPQIMMNFEKDYPGTQKVLLNVNYRCTEEILNSAMRMIKHNKNRFPK 296 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 + + P+++ + L +E +L D V+ + Sbjct: 297 KLSTPNEKGCPVQICQLEQPRQQSLFVLKDLQKFVEAGGSL--EDAAVLFRTNLEAENMV 354 Query: 423 QAVFGSAPADRYLPYAISDRRA-RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 + + +LP+ + +R H + + + + + LA+++ P Sbjct: 355 -----NVLMEFHLPFTMKERLPDLYEHWICRNLLDYMEMAQGDMSRKRFLAVMNRP---- 405 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 I+ E + R + + + + ++L L + + Sbjct: 406 NRYISREAVYEKRVSLESLRMYYEEKEWMCDRIDL-------LEEQLKLLRQMKPYAAVN 458 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 + + A L L+ + LE+W D N Sbjct: 459 FIRHGIGYEEYLRDYAAYRKIKSEELFELLDRIQESTKGMDSLEQWKEHMEDYGN----- 513 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 +L ++ Q + V I Sbjct: 514 ------------------------------------------KLKEQAARQSQKSEGVTI 531 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 TL ++ + ++ V +L +N+G P + A L L ++ F + Sbjct: 532 STLHSVKGLEYERVYILNVNEGSIPYKKAVLEEQLEEERRL-------------FYVGMT 578 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 A++KL++ Y+ Q ER S ++E+ Sbjct: 579 RARKKLFLCYVTH--QFEKERERSRFLEEV 606 >UniRef50_Q0TV46 ATP-dependent helicase/nuclease subunit A n=12 Tax=Clostridium RepID=ADDA_CLOP1 Length = 1271 Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 71/893 (7%), Positives = 213/893 (23%), Gaps = 211/893 (23%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA----GQLFNSDGEQDVGNPLLASWG 304 G+IK + + ++ + + + VG+ + + Sbjct: 382 GNIKPSQVALEFKDKFEEVLVDEYQDSNTIQETIVGMVSRRDVENPNVFMVGDVKQSIYK 441 Query: 305 KLGRDYIYLLSDL-------ESSQELDAFVDVTPDNLLHNIQSDIL-------------- 343 + L +S++++ + + + N + I Sbjct: 442 FRQANPELFLEKYINYREFEDSNRKIMLYKNFRSREEIINGVNYIFKTLMSNTVGELEYD 501 Query: 344 --ELENRAVAGVNIEEFSRSDNKRPLDPL---DSSITFHVCH------------------ 380 E N + + E + I ++ + Sbjct: 502 EKEALNLGASYGELNEENVEKEYIDEIENLKVAGDIELNILNKAGNKEYRDDDELGEEEE 561 Query: 381 ---SPQREVEVLHDRLLAMLEEDPT---------------LTPRDIIVMVADIDSYSPFI 422 S Q E ++ ++ ++ + + +DI++++ +++ Sbjct: 562 DLDSIQLEARIIGKKIKELMNPEDGSHYMVFDKDLGKYRRIKYKDIVILLRATKNWA--- 618 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 F +P + ++LL + D+ +L+ L P+ + Sbjct: 619 -ETFVDELGTYGIPVYADTGTGYFQTIEIRTILALLHIIDNPMQDIYILSALRSPIFSFT 677 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 LR L + + E G Sbjct: 678 -SEEFADLRLLNK---------------------------------DKYFFEIIKEVVDG 703 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF-FLP 601 + + EL G L LN WR A P++E++ + + ++ Sbjct: 704 IYD--------ESISKELKGKCKYFLDYLNKWREKAAYM-PIDEFIWFLYSDTSYYGYVG 754 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR--FLAGPV 659 + + + ++L + ++ V Sbjct: 755 TMPNGVQRQANLRILFQRAKQYESTSFKGLFNFINFINKLKKSSGDMGSAKILGENENVV 814 Query: 660 NICTLMPMRSIPFKVVCL---------LGMNDGVYPR-------------QLAPLGFDLM 697 I ++ + + F VV L + + + + + Sbjct: 815 RIMSIHKSKGLEFPVVILGGTGKQFNKMDLREDILLHETLGIGTNCIDVKKRIKYDTLQK 874 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPS---------- 745 K+ + ++ + A A++KL I+ ++ + E S Sbjct: 875 HAIKKKCELEVLSEEMRILYVAFTRAKEKLIITGAVSDLEKSCENWCKASASSGDNRINP 934 Query: 746 -------VLVQELIDYIGQSHYLPGDEALNCDESEARVKAH--------------LTCLH 784 + + + + + + + T + Sbjct: 935 GNVLKGKSYLDWICMALTKHKDGDAIRNIGNGDITLNLDDKSNWSFKSWDRSELLETNNN 994 Query: 785 TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHP 844 + + ++ ++ + ++ P + + L+R AH Sbjct: 995 KKEKNNIDIFESNNWIESKKDIKEVIEIRDRLGFKYKYIESCNTPSNISVTELKR--AHQ 1052 Query: 845 VRAFFQMRLQVNFRTEDSEI-----------PDTEPFILEGLSRYQINQQLLNAL----- 888 F Q + + E + + I ++ + Sbjct: 1053 EEEFMQESYNIIDNESNEENKKEKIKRKPRFMEERQEEFSAAKKGTITHFVMQHIDLDKV 1112 Query: 889 -----VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEI 943 + ++ + + + + +I + Q++ + + ++ + + Sbjct: 1113 TYIDEIREEVLKMVKKELLTEEEGKVVNVFKIQKFFKSDLGQRMLNSYKSGKKVYRELPF 1172 Query: 944 DLAC----------------NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL 980 V++ G + + + Sbjct: 1173 ITEIPSSIIEKNLDPKIYGEEKVRLQGIIDAFFEEEDGYVL-LDYKTDYVKEG 1224 >UniRef50_C0CXS0 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CXS0_9CLOT Length = 851 Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 80/874 (9%), Positives = 209/874 (23%), Gaps = 155/874 (17%) Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD----GEQDVGNPLLASWGKLGRDY 310 A +L + ++ + + VG+ + + Sbjct: 5 AVADELARQFEEILVDEYQDSNNVQETLITSISRERWGKPNVFMVGDVKQSIYRFRLARP 64 Query: 311 IYLLSDLES-------SQELDAFVDVTPDNLLHNIQSDILE-LENRAVAGVNIEEFSRSD 362 + E Q+++ + + + +D+ + RA+ G+ E + Sbjct: 65 ELFMDKYERYSVSESLHQKIELHQNFRSRATVLDSVNDVFYKIMTRALGGIRYTEETALH 124 Query: 363 NKRPLDPLDS---SITFHVCHSPQR-----------------EVEVLHDRLLAML----- 397 P + + + E ++ R+ ++ Sbjct: 125 PGAQFAPGERTGTPTELLLVDTGADALKQLDEEAMDYTAKELEARMVAIRIRELMDPENG 184 Query: 398 --------EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 EE + D+++++ + + VF + + +P + + Sbjct: 185 LMVWDKGAEEYRPVRLGDMVILLRSLSGW----SEVFVNVLMNEGIPAYAQTKTGYFNTV 240 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 +E +SLL++ D+ + A++ P+++ W+ + R Sbjct: 241 EVETVLSLLAVVDNPMQDIPLAAVMKSPMVSMT--------DEEMAWMMAAYKRTPEKGQ 292 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 + + G+ + + LA L Sbjct: 293 DRGVYGAFMHWKENGGEGVD----------------------APEEAVEAIGEKLACLET 330 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 L RR + ++ Y Sbjct: 331 LLEGLRRDARYLPVHQLLYRAFEAGGYYDYVSAMPAGETRRANLDMLVEKAIAYEATSYK 390 Query: 630 DAVPLSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN------ 681 ++L + E A V I ++ + + F VV L GM Sbjct: 391 GLFHFIRYIEKLKKYDTDFGEANVAGEQADTVRIMSIHKSKGLEFPVVFLAGMGKRFNKQ 450 Query: 682 ----------------DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 D + +Q + +R + ++ + A+ A++ Sbjct: 451 DAYGAVLLDADLGLAADYLDLKQRLKMPTLKKQALKRRMELESMGEELRVLYVAMTRAKE 510 Query: 726 KLYISYIGRSIQDNSERF-----------------PSVLVQELIDYIGQSHYLPGDEALN 768 KL ++ RS+ E++ + L+ L Sbjct: 511 KLIMTATDRSLGSKMEKWAQVPLADGAIPYTILAAAGSFLDWLLMSACDGTIRKRQIPLT 570 Query: 769 C----DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 + + + D RQ + Sbjct: 571 GLVGMEIRRQASRQVSREELLTLDTDTVYDPEAARQLADALNYRYPYGGDTGLYAMLSVS 630 Query: 825 PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQL 884 V + + + + R+ + T+ + E G +R + Sbjct: 631 ELKKQGQVGQDEEEIGRGRILGGGEEARILGDVWTDGAGEGGPERAGAVGAARGTAYHRA 690 Query: 885 LN-----ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEM-QQLADRVIACRQP- 937 L L ++D + G L A+ + + L R+ ++ Sbjct: 691 LECLDLGKLHSREDVRAALKSLLETGYLEREAYDALDEMVIFTMLNSPLGQRMAEAQRDG 750 Query: 938 --GQSMEIDLAC-----------NGVQITGWLPQVQPDGLLRWRPSLLSVAQGM------ 978 + + + V + G + + + Sbjct: 751 RLHREQQFIIGIPAREMGRGDSQELVLVQGVIDAYLEEEDGLVLI-DYKTDRVPGGRAGR 809 Query: 979 ----QLWLEHLVYCASGGNGESRLFLRKDGEWRF 1008 + + + + Y + ++++ + Sbjct: 810 ECLAERYRQQVAYYQRALEQLTGKKVKENIIYSL 843 >UniRef50_Q03D71 ATP-dependent helicase/nuclease subunit A n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=ADDA_PEDPA Length = 1235 Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 95/1114 (8%), Positives = 249/1114 (22%), Gaps = 221/1114 (19%) Query: 5 YHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPL 64 + S+R D + + +P WLQ IA N + P Sbjct: 164 FSSDRSDEGLQDLILELFEFSNANPDPQA-----------WLQQ-------IAKNYEVPS 205 Query: 65 PASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDF--TLLRHYLTDDSDKR 122 + ++L E+ + ++ L E+ L++ ++ Sbjct: 206 DNVMDMEFIQQLLTEVKTK--------LMRIYRKDLDLTEQAINGGEPLKNAAEKFQNE- 256 Query: 123 KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQP 182 + D D + + + Y + Sbjct: 257 -----VDDLKTIIDSLNGSWDDVQQAVSKMKFAQLPRGKKEEV----QEFNAYAKSIRND 307 Query: 183 RWHRAN-LYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHL--L 239 N + ++ + + + I + LQ + L Sbjct: 308 FKDEFNTIADKYFKLSSEQMIAVFKDAHDLMMKLIEVQNQFAERFLQEKLTRRSLDFSDL 367 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTR-QRRHSFEDRELPLFRDSENAGQLFNSD--GEQDVG 296 + D ++ + + + ++ + + + D VG Sbjct: 368 EHFALQIVLDDSEEGQAIRRDFQQKFNEVIVDEYQDINPLQETILTSVASPDPGNMFMVG 427 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 + + + D +S F D + + + + N I Sbjct: 428 DVKQSIYAFRMADPSLFISKNNQ------FKDEEQADERIILAENFRSMRNVDDFTNLIF 481 Query: 357 EFSRSDNKRPLDPLDS----------------SITFHVCHSPQR---------------- 384 ++ D + + Q Sbjct: 482 NQVMDTEVGEIEYDDDAQLQFGAKYYPDEVQNNTEVMIYDDSQTDINDKEATPIISNKND 541 Query: 385 -EVEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 +++++ R+ + + L DI ++ + + + Sbjct: 542 GQLQMIAQRIQKLFADHTQIYDKKEQKMRDLEYSDIALLHSTGSNNLEIV-----DTFKK 596 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +P +++ + + ++LL + D+ + + A+L P++ Sbjct: 597 YGIPIQVNNAQDYFQTTEVSIMMALLKIIDNPYQDIPLAAVLRSPMV------------- 643 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 G+ ++ + L + H + L + + D Sbjct: 644 ------------GLKENELAFLRIGKKNGHYFEALL--------------YFLNEAKLDS 677 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 ++ +L + L QL+ + + Q ++ + + ++ Sbjct: 678 NNEFQMQLKTKITHFLEQLDHFSKLARQSTLVDLLWAIYDETGYLDYVGGMPDGPQRQNN 737 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERISQRFLAGPVNICTLMPMRSIP 671 + + +++ + D V + T+ + + Sbjct: 738 LHALYDRAKGYEESSFKGLFQFVRFVEKMRDKNKDLAENPVVTDVKAVKLMTIHGSKGLE 797 Query: 672 FKVVCLLGMNDGVYPR---------QLAPLGFDLMSQKPKRG-------------DRSRR 709 F +V L+ G + A +G L + + Sbjct: 798 FPIVFLIDAEHGFNTMDEKGRYVLDRDAGMGITLKDFIHRLEIDTVQKNWIISIKKQKAL 857 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQD-----------NSERFP-------SVLVQEL 751 + + AL A+QKL I+ S D + P S + + Sbjct: 858 AEKLRVLYVALTRAEQKLIITGAVNSADDTLNKWAEAVDTDETLIPAEARSKVSNFLDWI 917 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCL------HTRMPFDPQNYQPGERQSYARE 805 I + + A L + + + Sbjct: 918 GMAIMRVPSVVEKYADYNTRKLQGTLIPDVELKIINSSELMDQQGLTALKSAQIPELQQL 977 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPETVP-----LETLQRFWAHPVRAFFQ-------MRL 853 + + T + ++R + P + + Sbjct: 978 NAFDDIADVDKFKQIMNFKYHDEAATTTTAYQSVSEIKRVFDDPDKFELNFSEVDADQHI 1037 Query: 854 QVNFRTEDSEIPDT----EPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPY 909 + R + E + +L L + + + Sbjct: 1038 KPQNRFVTESLMAPRFMNEATKPKAAEIGTATHLILQQLDLNQPINETIIKDKIGELVMN 1097 Query: 910 GAFGEIFWETQC-----QEMQQLADRVIACRQPGQSMEIDLAC--------------NGV 950 E +++ E + + V Sbjct: 1098 RVLDEQVANRIRISTILDFFDSDLGQLMINHPENVHREEAFSLLLPAKGLFPKVKGDDDV 1157 Query: 951 QITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 I G + R + +E Sbjct: 1158 LIHGIIDAYFE-MEDRVILLDYKTDFVLPGSVEQ 1190 >UniRef50_B7PH97 Uvrd / recb / pcra DNA helicase, putative n=1 Tax=Ixodes scapularis RepID=B7PH97_IXOSC Length = 761 Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 41/391 (10%), Positives = 104/391 (26%), Gaps = 29/391 (7%) Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 Q Q + + R Y ++ R + ++ + Sbjct: 89 YQRYQEQCEREGVVDFGELLLRAYELLSRNAPIREHYQRRFKHILVDEFQDTNVLQYRWL 148 Query: 284 GQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDI 342 L VG+ + + G + + F + ++ + Sbjct: 149 RLLAGDQACMFAVGDDDQSIYAFRGANVGNM----------ADFERDYARGNVIRLEQNY 198 Query: 343 LE---LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE 399 + + A A + N + S E + + D + A++ E Sbjct: 199 RSCGHILDSANALIENNSGRLGKNLWTDSGEGELVRISELASDALEAQWIVDEVRALIAE 258 Query: 400 DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLS 459 +I ++ V + LPY + ++ ++ L Sbjct: 259 GKPRR--EIAILYRSNAQ-----SRVIEHRLFSQGLPYKVYGGHRFFERQEIKHVLAYLR 311 Query: 460 LPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPAT 519 L D+ L +++ P I + L E G ++ + Sbjct: 312 LMDNADDDTAFLRVVNFP----TRGIGARSVEQLADLARERGTSLLRAIPYLQGRAAASL 367 Query: 520 GQHT----WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 + + ++L + ++L + ++ AE + +L L+ + Sbjct: 368 MRFSNLIQDMASQAQILSLPELIEHVVHDSTLLAHYQADREGAERLENLQELVNAATAYA 427 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 + +E L P+ + + + Sbjct: 428 QEQGKELFLTGAKPIACAVCHTLADAGSAGA 458 >UniRef50_D2EH37 Recombination helicase AddA n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EH37_PEDAC Length = 1238 Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 81/939 (8%), Positives = 212/939 (22%), Gaps = 197/939 (20%) Query: 171 ALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQAL 230 L+ + + Q+F + L S L LQ LQ Sbjct: 327 QLIAIFKDAREIMLKLIEVQQQFSDRFLQEKLTRRSL-------DFSDLEHFALQILQNQ 379 Query: 231 GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 + A + ++ + + D Sbjct: 380 SEEG-------------------QAVRRNFQEKFNEVIVDEYQDINPLQETILTAVARED 420 Query: 291 --GEQDVGNPLLASWGKLGRDY-------IYLLSDLESSQELDAFVDVTPDNLLHNIQSD 341 VG+ + + D + + + + + + + Sbjct: 421 PGNMFMVGDVKQSIYAFRMADPSLFISKSRRFKQSGQPDERIILAENFRSMQNVDDFTNL 480 Query: 342 ILELENRAVAGVNIEEFSRSDNKRPLDPLDSSIT----FHVCHSPQRE------------ 385 I + A I + + K + + + Q E Sbjct: 481 IFN-QIMDQAVGEIAYDADAQLKFGAKYYPAEVQNDTEVLLFDDQQNENTADQEPGAIIT 539 Query: 386 ------VEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVFGS 428 ++++ R+ + + L DI ++ + ++ + Sbjct: 540 DKNDGQLQMIAQRIKRLFADQTEVFDRDTQEMRPLKYSDIALLHSTGNNNLNIV-----D 594 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 +P +S+ + + ++LL + D+ + + A+L P++ Sbjct: 595 TFKKYGIPIEVSNAQDYFQTTEVSIMMALLKIIDNPYQDIPLAAVLRSPIV--------- 645 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 G+D++ + L + H + L +Q+ Sbjct: 646 ----------------GLDENELAFLRISKKNGHYFESVL--------------YFQNEF 675 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 D + A L + L QL +R+ Q ++ + ++ ++ Sbjct: 676 KIDYQNEFQANLKRKIDQFLAQLQHFRKLSQQCTLVDLLWEIYQETGYLDYVGGMPDGPQ 735 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERISQRFLAGPVNICTLMPM 667 + + +++ ++ D V + T+ Sbjct: 736 RQNNLHALYDRAQSYEESSFKGLFQFVRFVEKMREKNKDLAENPVVTDTEAVKLMTIHSS 795 Query: 668 RSIPFKVVCLLGMNDGVYPR---------QLAPLGFDLMSQKPKRG-------------D 705 + + F +V L+ + G + A +G + + Sbjct: 796 KGLEFPIVFLIDADHGFNNSDTKGRYVLDRDAGMGITVKDFVHRLEVDTMQKNWIIDVRQ 855 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYI-----------GRSIQDNSERFPSV-------L 747 R ++ + AL AQQKL ++ ++ P Sbjct: 856 RKMLAEELRVLYVALTRAQQKLIVTGALKAATPTLEKWAQAADTGELLLPEAERGKAKNF 915 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL 807 + + I + + + L D Q + Sbjct: 916 LDWIGMAIMRVPSVMENYPEVSSRKLDSFAGVEVKLKVVNRADLLAGQRSDTGIEQGTPP 975 Query: 808 PAASQAGKAHSEFVQPLPFTLPETVP------------LETLQRFWAHPVRAFF-----Q 850 + + L + ++R + P + Sbjct: 976 TLEKMDVNSDINDADQIRAILNFKYHDIEATQTTAYQSVSEIKRVFDDPDKLEMDFSAVD 1035 Query: 851 MRLQVNFRTEDSEIPDTEPFILE------GLSRYQINQQLLNAL-VEQDDAERLFRRFRA 903 ++ + P + +L L + + + + + Sbjct: 1036 RDQKIRPQKRFVTDQLMTPRFMSEVSQPKPTEIGTATHLILQQLDLREPVTQAVIKDKIR 1095 Query: 904 AGDLPYGAFGEIFWETQCQEMQQLADR------VIACRQPGQSMEIDLAC---------- 947 + + + + + + Q + L Sbjct: 1096 ELVMNQVLEEAVAKRIRINSILDFFESELGQLMLAHPEQVHREEAFSLLLPAKGLFPNVV 1155 Query: 948 --NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 V I G + R + + Sbjct: 1156 GNQDVLIHGIIDAYFE-LDGRVILLDYKTDFVLPGSPQQ 1193 >UniRef50_B6WA23 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6WA23_9FIRM Length = 910 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 115/968 (11%), Positives = 279/968 (28%), Gaps = 164/968 (16%) Query: 1 MLRVYHS-----NRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTL-SQKF 54 M++V S N L + +E ++++ E ++V + + S K+ Sbjct: 1 MIKVIMSKFPEENSL-YIYKDIEEKLKKK------EQSFLIVPEQYTLESDMDFIDSIKY 53 Query: 55 GIAANIDFPLPASFIWDMFVRV-LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRH 113 + +S I + R+ L + + +K + L ++L ++ ++ L+ Sbjct: 54 KSVMDAKVLSFSSLISYISQRLSLKKHENLNQVSKAIL---LTSVLDEVDDK-----LKL 105 Query: 114 YLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGE-AQAWQAPLWKAL 172 + SD + LS ++ +Y + D+ Q E ++ + + ++ + Sbjct: 106 FSNKASDIDFVTSLSDFISN-IKEYY-FDHDFFDQIENNENLDTMTKLKFKEIKIIYDSY 163 Query: 173 VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGK 232 V+ ++ + I+ + + L + L ++ L K Sbjct: 164 VKKLENSYIDSEDELSIIKDNIKYCDFLKNVN------FYFDKFDLLSDLKLDFIRELIK 217 Query: 233 HI-EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 +I + + +YY + + R Sbjct: 218 IGAKITVSISLDSKYYQNHFSNDMEIFDQSMRFVES------------------------ 253 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 + L+ Q ++ DIL++ Sbjct: 254 ----------------------IKSLDKIQIINVEKKS-----------DILDI------ 274 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 ++ E N S+I S E+E + + ++ + DI ++ Sbjct: 275 -NHLYENFEKYNPEKFWDKTSNIKIVESISSTNEIENMALMIEKLIR--KGYSYSDISLV 331 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 +A+ D Y I+ +F + +P I + + V++ ++SL+ L F D+ Sbjct: 332 MANEDEYENLIRRIF----SRMNIPIFIDKSQKMSDNHVVKTWLSLIRLVVFNFRKTDLE 387 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 A + ++ D E L + + N R + + G + Sbjct: 388 AFIRSDLI----DFGENSLERVLVFQNYMNTRKIKGSMIFDDKYFTLDEN--FYKGEIKE 441 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 + + +L I+ + ++ ++ + + Sbjct: 442 EKKEELAKVNSIRKIILDLTNDLYEISNKNISASDIVKKIFNLIDNERIKSGFNHYQEYI 501 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 +D + I ++ I+ + + L + + + + I Sbjct: 502 KDNKIEIY-------EENKQIWDKFITILEQIVSIMKDGKANLRKIYKLIQKACEATTIG 554 Query: 652 QRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR---- 706 A V I R K+ +GM D +P ++K Sbjct: 555 LIPPAIDQVLIGDFSRDRINDRKIKIFVGMTDIYFPENNNSDMLISENEKTSLEKEGFDL 614 Query: 707 ----SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 ++++D L + + ++ QK+ SY + ++N S + ++I+ Y Sbjct: 615 KIYKAKKNDKILLNILRMFTSSQKIIFSYSLIN-KNNDPMNKSTSISDIINIFPNISYQK 673 Query: 763 GDE-------------ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWL-- 807 + + +K F Q + S E+ Sbjct: 674 ISTGKFDLVKYSKDLLDMKAYQILWDIKEKEKVSEIEKEFVKAYLQFKKDFSKNYEFNIS 733 Query: 808 ----PAASQAGKAHSEFVQPLPFTLPETVP------LETLQRFWAHPVRAFFQMRLQVNF 857 G +S PL + + + + ++ + P + F L+ Sbjct: 734 KNSSYDLFIKGFTYSNQKNPLDKEISKKLYNKNRFSVSEIESYARCPYKYFINYGLRAKK 793 Query: 858 RTEDSEIPDTEPFILEGLSRYQINQQLLN---ALVEQDDAERLFRRFRAAGDLPYGAFGE 914 ++ + I + + D E L + L F + Sbjct: 794 SK---------NLDVDMMEIGNIVHYNMENISKDLRGIDIENLDD--KKLESLVKENFEK 842 Query: 915 IFWETQCQ 922 + + Sbjct: 843 AIESSLEK 850 >UniRef50_B0CJK2 Double-strand break repair helicase AddA n=35 Tax=Rhizobiales RepID=B0CJK2_BRUSI Length = 1180 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 101/835 (12%), Positives = 188/835 (22%), Gaps = 167/835 (20%) Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNS-----------DGEQDVGNPLLASWGKLG 307 KL ++ + + L VG+ + + G Sbjct: 397 KLDRGIDHILVDEAQDTSPDQWQVIRMLSEEFFSGLGQRNVQRTLFAVGDEKQSIYSFQG 456 Query: 308 RDYIYLLSDLE----SSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 + + + N D+L+ + A Sbjct: 457 AVPDDFAEQGRAISIQASNAELKFERVSLNFSFRSTPDVLQAVDEVFARPEANRGLSGAT 516 Query: 364 KRPL--DPLDSSITFHVCHSPQ--RE------------------VEVLHDRLLAMLEEDP 401 D I +P+ E E + + L+ Sbjct: 517 VHSAIRDKEPGEIEIWDMLTPEMVEEPDDWRVPVDQLAAPAVRLAEQIAATIRYWLDRGE 576 Query: 402 TLT-------PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 + PRDI+V+V D + P + A + +P A +DR SH ++ Sbjct: 577 PIPGQNRKIAPRDIMVLVRKRDQFMPALSR----ALKNLSVPVAGADRLQLTSHIAIQDL 632 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 ++L + ALL P+ G DDD + L Sbjct: 633 MALGRFVLQPSDDLSLAALLKSPLF-------------------------GWDDDRLFTL 667 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 P T L R A L Q++ Sbjct: 668 AYPRGAGDTLFEYLYRASRHDAE------------------------------LAQIHKL 697 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 +L+A L A+ L Sbjct: 698 LSRWRNMADTMPVFEFYARVLSADGARRKLLARLGPEAGDIIDEFQNYALSAERAGLPGL 757 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY--------- 685 + L + + V I T+ + + VV L+ V+ Sbjct: 758 QAFLETLEAAAPEIKRELDQGRDEVRIMTVHAAKGLEGAVVFLVDPGSAVWTGSRAPKLI 817 Query: 686 -----------------PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 P GF + + ++ ++ R L + A+ +L Sbjct: 818 PYDFQGDGPPVKGFLWQPNSSCQTGFT--AAEIEKLKNRAEEEYRRLLYVGMTRAEDRLI 875 Query: 729 ISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMP 788 I + + L++ + + + K + + Sbjct: 876 ICGYRGTRESGET------WHRLVEDALAAKSETFVHPVTGVAARRYRKTPRSFIEINEE 929 Query: 789 FDPQNYQPGERQSYAREWLPAASQAGKAHSE----FVQPLPFTLPETVPLETLQRFWAHP 844 R+ + A + + + P + LQ P Sbjct: 930 DQAGATSLPPLPHDYRQPMKAEPGLPRPLAPSGASALIEADEEPPLDLSSPVLQPGTGAP 989 Query: 845 VRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAA 904 + ++ E E L + DAERL Sbjct: 990 A-FALRRGTAIHMLLEYLPDVAPEKREHLAADY------LARIAADWPDAERLKAWQSVH 1042 Query: 905 GDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGL 964 L FG +F E E+ + ID+ ++G + ++ D Sbjct: 1043 AILDDPRFGPVFAEGSRGEVAVMG-------------MIDIGGRDHAVSGQIDRISVDES 1089 Query: 965 LRWRPSLLSVAQGMQLWLE-----HLVYCASGGNGESRLFLRKDGEWRFPPLAAE 1014 R + LE + A L+ + E Sbjct: 1090 -RVLIVDYKTNRPPPKTLEAVPSAYRAQLALYRELLRPLYPGRVVEAALLFTEGP 1143 >UniRef50_A8U8N0 Exonuclease RexA n=3 Tax=Lactobacillales RepID=A8U8N0_9LACT Length = 1267 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 87/968 (8%), Positives = 227/968 (23%), Gaps = 186/968 (19%) Query: 157 GLGEAQAWQAPLWKALVEYTHQLG--QPRWHRANLYQRFIETLESATTCPPGLPSRVFIC 214 G EA A K L + + + Q I+ + +A + + Sbjct: 301 GTDEAIKETAEEMKLLRDQYKNRFKELTNDYFSASPQEQIDLMLNAAPLVEEMARVTQLF 360 Query: 215 GISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDREL 274 + L + HL ++ D + + ++ + Sbjct: 361 --TDAYRQRKDERNLLDFNDLEHLTLQILAQFKKQDWVPTEASMHYRDKFKEVMVDEYQD 418 Query: 275 PLFRDSENAGQLFNSDG----EQDVGNPLLASWGKLGRDYIYLLSDLES------SQELD 324 L + VG+ + + D L E + + Sbjct: 419 INQLQENILRWLAHDQSDQGNLFMVGDVKQSIYSFRLADPGLFLKKYEQYGHHQSGERII 478 Query: 325 AFVDVTPDNLLHNIQS--------------DILELENRAVAGVNIEEFSRSDNKRPLDPL 370 + + + D E + + + Sbjct: 479 LAENFRSRGEVLQFTNLIFEQLMDKAVGQMDYDEAAQLVQGFSGFPALQKHHPELLIYEK 538 Query: 371 DSSITFHVC-------------HSPQREVEVLHDRLLAMLEED-----------PTLTPR 406 ++ + + E+ ++ ++ +++ + + Sbjct: 539 GTTDSEEDSEETESVNWDMRIEDKTEGELLMVGQKIQELIQTQFPIYDKRSKTTRPIRYK 598 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 DI+++ + V +P ++D + + +SLL + D+ + Sbjct: 599 DIVLLTPTKKNNL-----VLMEMFKRLSIPLQVNDTQNYFQTTEITIMMSLLKVIDNPYQ 653 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 + A+L P++ ++ Sbjct: 654 DIPLAAVLRSPIVG--------------------------------------LDENELAS 675 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 G ++ + +Q+ +++S L G + LL +LN WR ++ + Sbjct: 676 IRISQKTGDYYDALKTFYQTYPGIEKASRFTTNLYGKIDVLLTRLNKWRELARRDHLVAL 735 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 + D ++ + A + +++ ++ Sbjct: 736 IWAIYDDTGFLDYVGGMNSGKQRKANLHALYERAASYEKTSFKGLFQFVRFIEKMQEKDK 795 Query: 647 QERISQ--RFLAGPVNICTLMPMRSIPFKVVCLLGM----------------------ND 682 V + T+ + + F VV +L + D Sbjct: 796 DLAEPTAISEDEDAVRVMTIHASKGLEFPVVFVLDLTKKFNLQDIKKSYVFNEQYGVGTD 855 Query: 683 GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI--SYIGRSIQDNS 740 + + ++ AL A++KL++ SY Sbjct: 856 YKDLERRIRYPSLPETALKVEKKTKLLSEEMRKLYVALTRAEEKLFLVGSYKNEEAAWKE 915 Query: 741 ERFPS-----------VL----VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 S + + I H +E + + H Sbjct: 916 WGVVSSHTPTVLPADIRFTSGSLMKWIGLALVRHPSSENEFTSFTARNGTITNHSAHFAV 975 Query: 786 RMPFDPQNYQ------------PGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV- 832 + + E+ +E P + + + + +T Sbjct: 976 HFYDESVIQEQLISKDVDLDENWLEKLDEQQEKTPTDESTHQTVQKALALMNYTYEHEGA 1035 Query: 833 -------PLETLQRFWAHPVRAFF--------QMRLQVNFRTEDSEIPDTEPFILEGLSR 877 + ++R + P + R + + D + TE + Sbjct: 1036 SHTTSYQSVSEIKRLFEEPDSDQMVKIDVSQPRNRNRYVEDSLDRPLFMTELTVPSNAEI 1095 Query: 878 YQINQQLLNAL-----VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ-QLADRV 931 ++ A+ ++ E L AG L ++ Q L + + Sbjct: 1096 GTATHSVMQAVDLATKPTKESLEALIASLIKAGVLKEEVASKVNVGQLVQFFATPLGNMI 1155 Query: 932 IACRQP-GQSMEIDLAC--------------NGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 + + + L + + I G + + + Sbjct: 1156 LDYSKEVHREEPFSLLLEAEKIFTDMNGDAEDKILIHGIIDG-YIELEDHIILFDYKTDR 1214 Query: 977 GMQLWLEH 984 + Sbjct: 1215 VSHYGAQA 1222 >UniRef50_A4IKW7 ATP-dependent helicase/nuclease subunit A n=94 Tax=Bacteria RepID=ADDA_GEOTN Length = 1242 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 99/967 (10%), Positives = 221/967 (22%), Gaps = 204/967 (21%) Query: 132 ADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQ 191 A+L D+ R + E AW + ++ A L + Sbjct: 304 AELIDEAKSLRDQAKKKIEALRDNVFSLHPSAWL--------RHMREMKPVVETIAALVR 355 Query: 192 RFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDI 251 RF E+A GI + L+ L ++ G+ Sbjct: 356 RFSAMFEAAKREK----------GIVDFSDLEHYCLRILRQYDPET-----------GEW 394 Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG----EQDVGNPLLASWGKLG 307 + + + + ++ + + VG+ + + Sbjct: 395 QPSSAALEYQAQFDEVLVDEYQDTNLVQETILQLVKKGSERTGNLFMVGDVKQSIYRFRL 454 Query: 308 RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE----------- 356 + + L + D + ++ S+ + Sbjct: 455 AEPMLFLDKYKRF-----TADGEAGGMKIDLASNFRSRAEVLDGTNFLFAQIMGEAVGEM 509 Query: 357 ---EFSRSDNKRPLDPLDSSITFHVCHSPQREV-----------------EVLHDRLLAM 396 E ++ ++ + QR ++ +++ + Sbjct: 510 VYDEAAQLKYGADYPEGTDAVPEVMIIDRQRTSEEDEEETAELEAAELESRLMAEKIKEI 569 Query: 397 LEE-----------DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 + RDI+V+V + + I + +P A Sbjct: 570 VSRPFYVYDRSSGQQRRAMYRDIVVLVRSMTNAPQMI-----EQLQAQGIPAAADLSSGY 624 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 + +SLL + D+ + + A+L P+ Sbjct: 625 FQATEISVMLSLLKVIDNPYQDIPLAAVLRSPLFRFD----------------------- 661 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 L + L + Q+ +G Sbjct: 662 -------------------ENELAMIRLSDPKGTFFEALQAFCQKTAETGEEENAKEKAI 702 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 S L +L WR + + + RD F+ + + Sbjct: 703 SFLNKLEEWRTMARRRSLADLIWQLYRDTQFYDFVGALPGGKQRQANLRALYDRARQYES 762 Query: 626 AQYGDAVPLSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 + + L +R D V + T+ + + F +V L+G+ Sbjct: 763 TSFRGLFRFLRFIERLQERGDDLGAARPLGDQEDVVRVMTIHSSKGLEFPIVFLVGLARP 822 Query: 684 ----------------------VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 V+PR + + ++ + AL Sbjct: 823 FYTRDLHSPYLLDKELGFAARFVHPRLRISYPTLPLLAIQVKKRLELLAEEMRILYVALT 882 Query: 722 SAQQKLYISYIGRS-----IQDNSERFPSVLV---------QELIDYIGQSHYLPGDEAL 767 A++KLY+ + S + + +D+IG++ D Sbjct: 883 RAKEKLYLLASVNDADKEIEKWKGVAAESGWLLPDDVRASARSYLDWIGRALIRHRDGRS 942 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT 827 + + A + + S RE A + Q Sbjct: 943 LVEVNRPDEIASHPSVWRFEIVSAAKLRN-AEVSTDREDGGALVALEQGRPVPTQGEWEE 1001 Query: 828 LPETVPLETLQRFWAHPVRA-----FFQMRLQVNFRTEDSEIPDTEPF------------ 870 L + VRA + + + D +P Sbjct: 1002 EARRRLLWRYRYGKETVVRAKQSVSELKEQQALFGEQADEWLPRKGTAPLFSRPRFMQEK 1061 Query: 871 ILEGLSRYQINQQLLNAL-----VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 L + ++ L +++ R L + Sbjct: 1062 TLTPAEKGTALHVVMRHLDLHAPMDESSIRSQIIRLVEKELLSAEQAETVDAAAIVAFFA 1121 Query: 926 -QLADRVIACRQPGQSMEIDL--------------ACNGVQITGWLPQVQPDGLLRWRPS 970 + R+ A R+ + + L + + + G + V D Sbjct: 1122 TDIGRRLCAAREVYREVPFSLGLPADELYGSEGMESGRRLLVQGVVDCVFADERGYV-VI 1180 Query: 971 LLSVAQG 977 + Sbjct: 1181 DYKTDEV 1187 >UniRef50_Q2SKI4 UvrD/REP helicase family protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKI4_HAHCH Length = 631 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 77/505 (15%), Positives = 143/505 (28%), Gaps = 97/505 (19%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRD-- 309 D L + ++ + + E L + VG+ + + G + Sbjct: 219 DAELRDALQYHLKHFIIDEFQDCNYLQFEAIRLLAANAVSITVVGDAKQSIYQFRGSEPT 278 Query: 310 -YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 + L ES + N L + + +A R Sbjct: 279 VFQAFLEAYESPSVRVLDTNYRSLNKLVQLSNK--------LADSMPHRLQDDIAMRAHK 330 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 D + F + E + + +L D +P +I V+ + Sbjct: 331 SGDGVVQFASPLNVMTESNEVAANIQTLL--DAGTSPDEIAVLYRENSQRLHI-----EQ 383 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 A R +PY +++ +SL P S +E Sbjct: 384 ALIARRIPYLVNEGVPLMRRRGPRMLLSLCLAPSS----------------------SES 421 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L + R I + + + Y E+ Q + Sbjct: 422 PLEEKYLEYILNHSRINIQWRHKKSGK-------------------YKDEAIFKYLQFIS 462 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 D S G A + L+ +LN +EE L F E+ A Sbjct: 463 DADGSLGEKATDIIRDIRLIKKLNH-----CPPSQVEEQLWEILLRHTYFSREGMESLPA 517 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMR 668 +I+Q + V L +EL S++ + +++ T+ + Sbjct: 518 KVVIQQLLDGL---------KKGVALEQSAEELLAI-----NSEKTESDKIHLMTIHASK 563 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 F V L+ +S +R D R+++R +F AL A+ +L+ Sbjct: 564 GTEFDTVFLINAT---------------LSDHKERDD--NREEERRVFYVALTRAKNRLH 606 Query: 729 ISYIGRSIQDNSERFPSVLVQELID 753 IS + + PS + EL Sbjct: 607 ISCPQYNER-GLPLQPSPYIAELRR 630 >UniRef50_C4LK54 Putative ATP-dependent DNA helicase II n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LK54_CORK4 Length = 1175 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 110/925 (11%), Positives = 242/925 (26%), Gaps = 116/925 (12%) Query: 143 PDWLAQWETGHLV-EGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESAT 201 P L E LV + L E A +W + A + F+ + Sbjct: 140 PRLLTGAEHDSLVRDMLREHSERGADIWPE----RLRSALTTLGFARQLRDFLLRVAERG 195 Query: 202 TCPPGLPSR---VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLA 258 L SA + +A + + + L + D D Sbjct: 196 CTSEELRQYGQGCSRDEWSA-AADFYDEYRATARLMGSNALNASELVRAAVDALDSDEEL 254 Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL-LASWGKLGRDYIYLLSDL 317 +D + SE + + V + + + G Y Sbjct: 255 AESLNFDVILIDDSQFFDPLSSELVERFRSRARLTLVASEQSESVFRFRGGSTTYADKLA 314 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILE--LENRAVAGVNIEEFSRSDNKRPLDPLDSSIT 375 ++ + + + + + + ++ ++ Sbjct: 315 KTENTIHLSGTKRLAPPVAELAARVADATRHPESLRWAKEIRHQDAERLSDHSAEFGEAD 374 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 V SP EV + DR+ D + +DI V+V +P + Sbjct: 375 VRVLVSPSAEVAAVVDRVRRAHIVD-NVQWKDIAVIVRSKSQAAPM-----RRGLLAAGV 428 Query: 436 PY-AISDRRARQSHPVLEAFISLLSLPDS-RFVSEDVLALLDVPVLAARFDITEEGLRYL 493 P P++ A + + ++++ L+ P+ R + Sbjct: 429 PVADDPTEIVLLEQPMVRAILQAVRCAVGEDLTNDELERLVLSPIGGG----DPITFRCI 484 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + + ++ D+ T +G + + A+++ + D + Sbjct: 485 LRGLRRGFMKVEFDNPVRAAELTAITTTDDEDYGRS---VFRAIDALRFILLGGELIDLT 541 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD-------MLNAFFLPDAETE 606 L A + + + + +E L D + N A Sbjct: 542 ENLTAREKDLIMRVRSVIQAGQEAFYGGESVEAILWAVWDAAGLSEALANQSLRGGAVGS 601 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL--AQRLDQERISQRFLAGPVNICTL 664 A ++ A G + ++ + + R + + V++ Sbjct: 602 MADQHLDAVMSLFDAAGDYVERHPHSTITSFVRFIVEQELPTGARDRRGPVREAVDVSPA 661 Query: 665 MPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR---------------SRR 709 + V + G+ + V+P + DR R Sbjct: 662 HATVGKEWDTVVVAGLQEDVWPSLSETGTIFRQEEFVDFLDRGVEPGRPENRRGRYDDRL 721 Query: 710 DDDRYLFLEALISAQQKLYISYIGRSIQDNSER-----FPSVLVQELI--DYIGQSHYLP 762 ++R LFL A+ A++ L ++ +G + D+ S ++EL + SH P Sbjct: 722 AEERRLFLVAVTRARRSLLVTAVGPHVSDDGTVDSDADIRSRFLEELAGDQALASSHGEP 781 Query: 763 GDEALNCDE----------------------------SEARVKAHLT------------C 782 E+ + + S + A L Sbjct: 782 DAESSDSADLRALTSSGGSQTQSPLSVLPECEFPRVLSPDSLIAELRRVVESEDSSGHER 841 Query: 783 LHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET---VPLETLQR 839 H G+ S A E PET + ++R Sbjct: 842 HHAARQLARLALAAGDAPSRESVITAANPDHWWGVQELSTTKSLHDPETAYFISPSQVER 901 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFR 899 + P+ AF Q T + + E + R + V + R Sbjct: 902 YLECPLEAFLQSVETAGRDTTATLLGTLTHMAAEAMERG-----VDEGDVRDVFLATVPR 956 Query: 900 RFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLA--------CNGVQ 951 + + + + + +++L R A +E + + V Sbjct: 957 LLGTLTWKKHDQIDK-WTDMFDRLVEKLHLRYAAVTG-HAEVEQVIESRIGQTSSGDDVY 1014 Query: 952 ITGWLPQVQPDGLLRWRPSLLSVAQ 976 + G + +++ + ++ Sbjct: 1015 VRGKIDRLEISDVGKYYIIDFKTGN 1039 >UniRef50_C6QAP5 Double-strand break repair protein AddB n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QAP5_9RHIZ Length = 1038 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 111/1009 (11%), Positives = 256/1009 (25%), Gaps = 145/1009 (14%) Query: 77 LPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFD 136 L + P ++ + +L++ + + D + S + +L+++ L D Sbjct: 101 LDQPPAIDPLDRTLVLMQLISHWRATMAQSDADR-----SSGSTPAQSARLAAELGKLMD 155 Query: 137 QYLVYRPDWLAQWETGHLVEGLGEAQAWQAPL-WKALVEYTHQLGQPRWHRANLYQRFIE 195 + R + + E E WQ + + +V + R Sbjct: 156 D--IERENVSLSDIQNLVPETYAE--HWQKTVDFLKIVTEFWPAHLEASGMTSPEARRNA 211 Query: 196 TLESATTCPPGLPSR--VFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKD 253 + + L V + GI+ P ++ ++A+ + Sbjct: 212 LILAEAERIAKLAPDEIVIVAGITGSIPATVELMRAVAARPSGAI--------------- 256 Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYL 313 + + S G+P +G L Sbjct: 257 -----------------------VLPALDQSLDDASWSAIVSGHPEHPQFG-----LKKL 288 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELE-NRAVAGVNIEEFSRSDNKRPLDPLDS 372 L L + + + +S + + + ++ + +K L+ + Sbjct: 289 LDGLNVERGAVLTLPGFEAGDVDRTRSAFVSESMRPSSSTDQWHRYATTADKGELEKALA 348 Query: 373 SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPAD 432 I+ S Q E E + L +E ++ D + Sbjct: 349 GISLIEAPSAQDEAETVALILREAIETPGQTA----ALVSPDR-----LLARRVAIRLEA 399 Query: 433 RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 + S R ++ S F + +ALL P+ +F+ +R Sbjct: 400 WGIRVDDSAGRPFAKTVPGAFLALVIGAMVSEFAPAETMALLRHPLCRLKFNAF--DIRK 457 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 + + S R + + R RM ++ + Sbjct: 458 YARALEISAFRTSYLGHGLDGIRAALETAERDRAEKKRMHPAARRLWSEDCDGARELVAR 517 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 + L A+ Q E D + Sbjct: 518 LAAAFQPLADLYAANGDQTLAEFARAHAEAAEALAQLPDDDAAAEASANPLWQGESGDTA 577 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 + + ++ + A A + L L R + + ++I R Sbjct: 578 SRFFAKLLDDATPAVAISAADYADLYATLLARENVRERTAVHP--RISIWGPFEARLQQP 635 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD--DRYLFLEALISAQQKLYIS 730 V+ L +N+G +P P + + G S ++ +L+ A+ +Y++ Sbjct: 636 DVLVLGSLNEGTWPEAAEPGAWLNRPMRRDLGLPSPEEEIGRAAHDFTSLLGAK-TIYLT 694 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 + D PS + + + A + AR + + Sbjct: 695 RAEK--VDGVPTVPSRWLMRMRALLKGMKLESVLVADKPWLAWARARDRIVGKR------ 746 Query: 791 PQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQ 850 +P P + + ++R+ A+P + + Sbjct: 747 -----------------------IAIKPPEPRPALALRPRRMSVTDIERWIANPYATYAR 783 Query: 851 MRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLP-- 908 L++ PD R + +L+ + Sbjct: 784 HILKLEPLPPLGASPD-------ASLRGALVHDVLSRFANAFPDRLPDDPLAELEKIAAD 836 Query: 909 -------YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC--------NGVQIT 953 + + + A+ R+ +S+ +++ + +T Sbjct: 837 VLQTYTGNARIAAFWMPRLKRFLSWFAEGEEKRREGVRSVIAEISGALVLAPTPDPFTLT 896 Query: 954 GWLPQVQPDGLLRWRPSLLSVAQGMQL---------WLEHLVYCASGGNGESRLFLRKDG 1004 ++ D + + L A G G L R Sbjct: 897 ARADRID-DTGSAVIITDYKTGAIPKQEWVENGRSPQLPLEAAIALGETGFPNLAGRTVE 955 Query: 1005 EWRFP------PLAAEQALHY--LSQLIEGYREGMSAPLLVLPESGGAW 1045 R+ P E+A+ + L R+G+ + + + Sbjct: 956 ALRYIRASGGEPAGEERAIKSNDIGTLAAQARQGLERLIAEFDDPATPY 1004 >UniRef50_A5V9S0 Double-strand break repair protein AddB n=2 Tax=Sphingomonas RepID=A5V9S0_SPHWW Length = 991 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 126/1025 (12%), Positives = 257/1025 (25%), Gaps = 173/1025 (16%) Query: 14 EALMEFIVERERLDDPF--EPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIW- 70 + + DP ++LV + A+ + ++ L + Sbjct: 16 ADALAAGLIARHGPDPLGLARTVVLVPNNRAARAISDAFVRRAEGG-----LLLPRLVAI 70 Query: 71 ---DMFVRVLPEI-PKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQ 126 ++ R+ + P ++ ++ + + L Q++ R D D + + Sbjct: 71 GDPELDERLGGLLDPIDADAEEEPIPPAIDPLERQMILARLTAEARQAAGDPIDGGEAIR 130 Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWK-ALVEYTHQLGQPRWH 185 L+ + DQ L+ + + LV ++ WQ L + Sbjct: 131 LAGELGRTLDQMLI---EQIPAARLRDLVALPELSEHWQRSLAMLDTILTRWPAELAARG 187 Query: 186 RANLYQRFIETLESATTCPPGLPS--RVFICGISALPPVYLQALQALGKHIEIHLLFTNP 243 R +L +R L+ P V GIS+ P + L + + E ++ Sbjct: 188 RIDLAERRNRLLDRVARRWRHRPPPGAVIAAGISSTTPAVARLLGVVARLPEGMVVLPG- 246 Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASW 303 + D A L + P +S L DVG +A+W Sbjct: 247 ----LDTVSDEAEWRALGPH--ETGEDGARPPRPVESHPQYALKRLLDRMDVGRGEVATW 300 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 G D + RA+A Sbjct: 301 RWGGG-------------------------------RDARSVRARAIANAMAPAAFTDKW 329 Query: 364 KRPLDPLDS--SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 R + +P E +V+ L +E ++ D Sbjct: 330 HRLPPAERRLSGVRAIELANPAEEAQVIALALREAIETPGRTA----ALVTPDR-----V 380 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 + + A + S P +++ F +LALL P++ Sbjct: 381 LARRVTAHLARWGIVADDSAGTPLSLTPAGTLLLAVAEAAAEGFAPVPLLALLKHPLVRR 440 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 W G ++ + Sbjct: 441 GAARG------------------------------------AWLDGARKLDIALRGPRPP 464 Query: 542 GEWQSVLPYDESSGLIAELVGH----LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + Y A + L R L E L R+ ++ Sbjct: 465 AGLDGIARYLRDGDGHARRARAPAIDWWDEVRPLLEPLEKAFSARTLAELLAALRETIST 524 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 + + E A + L L +D + Sbjct: 525 LADDAGWSGPDGRAAADLVAEL--EAWAPIGPAAFDPAGLAPTLRLLMDAVAVRPPQGGH 582 Query: 658 -PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR---SRRDDDR 713 ++I L+ R ++ L G+N+GV+P +P + + + G +R Sbjct: 583 PRLSIWGLLEARLQHADLMVLGGLNEGVWPALPSPDPWLAPRIRAELGLPGLETRIGLSA 642 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 + F A+ +L ++ R + + S L + Sbjct: 643 HDF--AMALGAPELIVTRARRDAR--APTIASRFWLRL------------------EAMT 680 Query: 774 ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP 833 + + D + P P + Sbjct: 681 GGITREHRLPNWAAAIDRPADRRF------------------IARPEPAPPVADRPNVIA 722 Query: 834 LETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD- 892 + L R A P + L++ P R + A ++QD Sbjct: 723 VTRLDRLQADPFAFYADAMLRLRPLDAVDADP-------TPAWRGTAVHAVFEAWMKQDD 775 Query: 893 -DAERLF--RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQ-----SMEID 944 D +RL + ++ + ++ +ADR+ R G+ ++ Sbjct: 776 CDPDRLLPRAEAMLRDMAAHPVMQALWEPRLIEALRWVADRMREERAQGRRPIAAELDGR 835 Query: 945 LACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWL----EHLVYCASGGNGESRLFL 1000 + G+ +TG + ++ + + G + F Sbjct: 836 VEVAGITLTGKVDRIDRLADGTLAIVDYKTGKPPSAAQVEAGYAMQLGLLGLIADRGGFD 895 Query: 1001 RKDGE 1005 +G Sbjct: 896 GIEGT 900 >UniRef50_Q03NA7 ATP-dependent helicase/nuclease subunit A n=1 Tax=Lactobacillus brevis ATCC 367 RepID=ADDA_LACBA Length = 1262 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 87/930 (9%), Positives = 214/930 (23%), Gaps = 209/930 (22%) Query: 248 WGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD---GEQDVGNPLLASWG 304 + A+L + ++ + + VG+ + + Sbjct: 382 QDSDQSRQVAAQLRHQFAEIMVDEYQDTNGLQEAILTAIAEPAPQGNLFMVGDVKQSIYR 441 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN- 363 D ++ + + L + + ++N I + Sbjct: 442 FRQADPTLFMTKTDQ------YAADAAAGELIVLAENFRSMKNVDDFTNLIFKQLMDREL 495 Query: 364 -----------KRPLDPLDSSIT------FHVCHSPQR---------------------- 384 K ++T ++ Sbjct: 496 GEIDYTGAAQLKFGASYYPDTVTSTAELLVYLTEDAPESAGDADSEAMDATFQVDNKHQG 555 Query: 385 EVEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 EV ++ ++ ++ + +T DI ++ + + Sbjct: 556 EVLMVGQKIQQLIADQTPIYDREAKQVRPMTYGDITLLTPTRTNNL-----IITDELRRL 610 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P ++D R ++ ++LL + D+ + + A+L P++ Sbjct: 611 GIPVVVNDARNYFKTTEIQIMMALLQIIDNPYQDIPLAAVLRSPIV-------------- 656 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 G++++ + L + ++ L +Q +++ Sbjct: 657 -----------GLNENELALLRINQRTGDYYQAVLH--------------FQRSFVPNQA 691 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 S + ++ L QL +R Q+ + + ++ ++ Sbjct: 692 SDFQQAVYQKVSHFLEQLQEFRDIAQQDELVTLIWRIYQETGFLDYVGGMPAGEQRQANL 751 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER-ISQRFLAGPVNICTLMPMRSIPF 672 + + + L +R D + V++ T+ + + F Sbjct: 752 HALYERAKSYEQSSFKGLFQFVRFVERLQERDDDLAGAPVQAADDAVSVMTIHGSKGLEF 811 Query: 673 KVVCLLGMN----------------------DGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 VV ++ + D + P + R+ Sbjct: 812 PVVFIMDASRQFNKQDQQGNYVMSGKTGIGIDYLDPDSRVKAPSLQKLVTAQAISRASLA 871 Query: 711 DDRYLFLEALISAQQKLYISYIGR--------------------SIQDNSERFPSVLVQE 750 ++ AL A+ ++YI + + + + + Sbjct: 872 EEMRKLYVALTRAESRVYIVGSHKTQEAAISAWEQAYQSPNLVLNATLREKNTLANYLDW 931 Query: 751 LIDYIGQSHYLPGDEALNCDE------SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 + + + + A H H P N + A Sbjct: 932 IGMCLVRDPKFAAELRQGTTTFSGLAGDPATFAVHFVTAHDLGPTQGVNETAVDWLQAAS 991 Query: 805 EWLPAASQAGKAHSEFVQPLPFTLPETV--------PLETLQRFWAHP-------VRAFF 849 E + + Q + F P + +R + P +A Sbjct: 992 ETAAKVTTPPVDTEQLHQIMDFRYPHQAATATTAYQSVSEAKRLFEDPDNATIGEYQASA 1051 Query: 850 Q-MRLQVNFRTEDSEIPDTEPFILEGL--SRYQINQQLLNAL-----VEQDDAERLFRRF 901 F T D PD + E L +L L D + + + Sbjct: 1052 TGQVGGHRFVTHDFARPDFLQTVREPLATEIGSATHLVLQQLDVTVTPTLDRVQGVIDQL 1111 Query: 902 RAAGDLPYGAFGEIFWETQCQEMQQLADR--VIACRQPGQSMEIDL-------------A 946 A L I E + + + A Q + + L Sbjct: 1112 VADQVLTAEVAQRIQPELILRFFSSSVGQQVLAAPDQLHREVPFSLLMPARSLFQDFQET 1171 Query: 947 CNGVQITGWLPQVQPDGLLRWRPSLLSVAQGM-----------------QLWLEHLVYCA 989 + V + G + Q+ L Sbjct: 1172 DSQVLVHGIIDGYLTTPAG-VILFDYKTDHVNAQNQAASIEKIVERYGGQVNLYAAALKQ 1230 Query: 990 SGGNGESRLFLRKDGEWRFPPLAAEQALHY 1019 G +L + +Q Sbjct: 1231 MTGQPIVGQYLYLLAIGELVAVPEQQVRRL 1260 >UniRef50_Q897P0 DNA helicase II n=1 Tax=Clostridium tetani RepID=Q897P0_CLOTE Length = 720 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 57/531 (10%), Positives = 146/531 (27%), Gaps = 91/531 (17%) Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 F + Y + L + + + ++ + N D QD Sbjct: 191 FMQIYKEYELFKRKNNLLDYDDMLVKCYKILNEDIVILDFYRNLYDYIEVDECQDTSKIQ 250 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL------------LHNIQSDILELEN 347 + L + Q + ++ D L L IQ + +N Sbjct: 251 QEIIKLISAPKFNLCIVGDDDQSIYSWRGAFSDGLLNFKKEYHKDGKLFFIQQNFRSDKN 310 Query: 348 RAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT 404 + + + + + I F ++ L L Sbjct: 311 IVITANEFIKSNKKRYNKELFTENEEGNKIKFINTKDEYDQINFLVKNLKE------KSN 364 Query: 405 PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA-RQSHPVLEAFISLLSLPDS 463 R+ ++ + S P + +P+ I D + V++ +S L Sbjct: 365 LRETTILYRNNISSIPIVDR-----LIQENIPFYIKDSVPSFFNSWVVKDILSFFELAFD 419 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 + + + + ++ L L + + + G + Sbjct: 420 LTNIDAFEKI----YYKMKSYVKKDDLNILYTRKIKESVFRTL---------YNNQGYSS 466 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + L + S+ ++++ + + Sbjct: 467 ANYRLKSFEEKFMKLSSLSGYKAI------------------NFIR-------------- 494 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 + D + + + I +++ + D + L Sbjct: 495 ---YELNYEDYMMDYCDKFKFNINNVQTILSILAMVLSSCPTLEDIDGKLI-----YLKD 546 Query: 644 RLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR 703 +++ + +F V + T+ + + F V ++ + + + P + K K+ Sbjct: 547 EMEKSKYKGKF--NGVILSTMHSCKGLEFDTVYIIDLIEHIIPSPESLD-------KSKK 597 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 D S +++ L A+ A++ LY+ +N + PS+ V++L Sbjct: 598 DDYSDFEEETRLMYVAITRARKNLYLINTLTR--NNKKCTPSIFVEKLYKI 646 >UniRef50_UPI0001C314BA ATP-dependent nuclease subunit B-like protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314BA Length = 986 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 112/875 (12%), Positives = 214/875 (24%), Gaps = 136/875 (15%) Query: 195 ETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDP 254 + L +A P P + ++A+ Y + L+ LG+ + D Sbjct: 128 QRLTAAVRALPDAPPTLH--EVAAIYDRYARGLERLGRVDAELFAWRAL------DALRA 179 Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIYL 313 T + F+D E ++ P A++ R + L Sbjct: 180 RKEVWGDTPVVFYGFDDFTTLERDAIETLSRVVGAEVTVSLTYEPGRAAFAGRARTFAEL 239 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS 373 QEL A D + +E + Sbjct: 240 SQIATEVQELPALDDWYDEA--------------GRAPLHALERGLFEPAAARDAEAGDA 285 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + V + E+E++ +L +L + +I V++ + ++ VFG+ Sbjct: 286 VRLLVAGGERAEIELVAATVLELL--GDGVPGEEIAVVLRTPARSASLVEQVFGAY---- 339 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P+ + R + ++L + +LA L Sbjct: 340 AIPHTLDWRVPLAHTALGRGLLALARCALLPADARPA------DLLAYLRTPGRLQRLEL 393 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + + R + L R+ A A Sbjct: 394 ADRLELTVRRRALLSMEEARRAWEEARGGWPLRELDRLRGAAADGPAALLGALAREARTL 453 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 + + A++ + Sbjct: 454 FVAPHRGQARV---------------------------------LDAAEEADARALSALL 480 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 + + + A L A + + G V + + +R+ F Sbjct: 481 RALEELGELAAAEPRRAAELLEPEALLAALGELEVSLGATAREGAVLVADPLAIRARRFD 540 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD---------RSRRDDDRYLFLEALISAQ 724 V + G+ +G +PR P F + + D+RYLF + Sbjct: 541 TVIVCGLQEGEFPRPAHPEPFLSDDVRRELNAVAGLRLPLREDALADERYLFYATASRPR 600 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 ++L +S D + PS V ++ + + + +A Sbjct: 601 RRLILSCRDADE-DGNPALPSFFVDDVRALLRELPERHRPLSAVTWPLDAAPTDAERERA 659 Query: 785 TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHP 844 + + P S A L E + L+R+ P Sbjct: 660 EALAAPRELPHPIGSLSEAATALLRQR------------------EVLSAGALERYARCP 701 Query: 845 VRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR------YQINQQLL---NALVEQDDAE 895 VR F + LQ D E I L R + I L +V + AE Sbjct: 702 VRWFVESELQPERFEPDPEAMARGSCIHSVLERTLARVSWPIAVAELPAIEQVVREVVAE 761 Query: 896 RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL---------- 945 G A + + A+ +E+ Sbjct: 762 EASAFTLGRGAAAQAAAAHEIAADVLRLLAHEAEAEAGGAFRPAELELRFGMGDESALPA 821 Query: 946 ---------------ACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWL------EH 984 +++ G + +V DG R + W E Sbjct: 822 LELTSAEPGDAAGGAPAEPLRLRGVIDRVDLDGAGRALVRDYKSGRRQPSWPVAKWASED 881 Query: 985 LVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHY 1019 + A L R+ + PL E Sbjct: 882 QLQVALYMVAVRELMGRQPAGGVYQPLRGEDLRAR 916 >UniRef50_B7J885 ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J885_ACIF2 Length = 745 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 58/509 (11%), Positives = 136/509 (26%), Gaps = 59/509 (11%) Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD- 290 + + + +P +AKL R + ++ + + +L + Sbjct: 230 RLAHVIDFGDLINLPFDFLRANPPAMAKLAHRYDQIIIDEAQDMDAAQYQGIQRLARAMP 289 Query: 291 --GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR 348 VG+ + +G G +L + + L E+ R Sbjct: 290 TPNLMLVGDDDQSIYGFRGSSP-SVLQYFADIFRPEIYR-------LERNYRSTREIVQR 341 Query: 349 AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 A V + SI + + + + RLL + Sbjct: 342 ASQHVAHNRHRIPKEPFSERETEESIFAYRHETDMDVLYWITRRLLQAHAD--GAPWSSF 399 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 V+ + P I A+ +P+ I + + ++ + L + S Sbjct: 400 AVLYRSR-RFGPQISAL----LVRYRIPFVIYGGLSFFEYLEVKFAGAYARLATNPRDSA 454 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 + L P+L D + L L + Sbjct: 455 ALRDLA--PLLPGVGDRYMDLLHA----------------------ALMENPTFGFVQAA 490 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ--LNIWRRGLAQERPLEE 586 + Q + E G + ++ + ++ Sbjct: 491 EACASNRFRTAHQSILKVQKTLRHLLQSNPETWGKTCWEYENSGIRVYLEKADAKEYADD 550 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 + + + + +Q +I E + V L +A Sbjct: 551 KSALIASL--------KRRQDNLGFFDQMITDVIHEADAEEAKHPVLL------IAGMFV 596 Query: 647 QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL-GFDLMSQKPKRGD 705 + + V + T+ + + F V + G + P + + ++ Sbjct: 597 TDAQKKDEDGDRVVLATVHACKGLEFDEVHIPGFVQPLMPWPIDDDRDITTLPPDDQQRI 656 Query: 706 RSRRDDDRYLFLEALISAQQKLYISYIGR 734 ++R+++R + AL A+ +L++ GR Sbjct: 657 YAQREEERRISYVALTRAKHRLFLHVPGR 685 >UniRef50_UPI0001C352F6 UvrD/REP helicase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C352F6 Length = 565 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 52/518 (10%), Positives = 124/518 (23%), Gaps = 88/518 (16%) Query: 262 TRQRRHSFEDRELPLFRDSENAG-QLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESS 320 + ++ + + E + VG+P + G L L++ Sbjct: 29 RNIQWVIVDEVQDCDGKQLEFIDCFMTGGAKLFAVGDPNQVIYSWRG-SAFNLFYTLKTR 87 Query: 321 QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCH 380 + +L + A ++ I + Sbjct: 88 YQ------AAELSLPV----NYRSSNEILEAARCFQQN--GGALEGTRGGGEKIVVKNHY 135 Query: 381 SPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 + +E L DR+ + + + +I + V + +PY ++ Sbjct: 136 NSFQEACYLADRICEL--QKQGIPFDEIAIFYRLQSQ-----SKVMEDVFSKNEIPYEVA 188 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 + P LE + LL + +L Sbjct: 189 VKTGIHEIPALEWLLRLLRFLADPADRAAAVFVLSS------------------------ 224 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 +G+ + +L G +A G ++ ++ + + I + Sbjct: 225 -REYGVGISAKKAEKLAEESCAWVCGRKEAQENGSEKAAAPGLFERMVSFARNGAEIEDT 283 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 G D+ + + + + Sbjct: 284 NGFYEYF-------------------------DLDCSLKPNASSYGEDKANVCHFLDRMF 318 Query: 621 AEGLGAQYGDAVPLSLLR---DELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 A + L + + V + TL + + F V + Sbjct: 319 AFMKAKGFSLPEGLREFLNSAALYGTSRELLPETDGAGENRVKMMTLHASKGLEFSHVFI 378 Query: 678 LGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ 737 +G+N G+ P + D++R LF + A+ L +S+ Sbjct: 379 IGVNYGLIPLRTKG--------------LDSEDEERRLFFVGITRARNYLELSWYTNPDI 424 Query: 738 DNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 S ++ + + + + R Sbjct: 425 FGVMAGESRYIRMIPSELVKGQESEMRTGTANLQELRR 462 >UniRef50_C5B538 Putative DNA helicase II n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B538_METEA Length = 707 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 90/628 (14%), Positives = 157/628 (25%), Gaps = 90/628 (14%) Query: 169 WKALVEYTHQLGQPR-WHRANLYQRFIETLESATTCPPGL--PSRVFIC-GISALPPVYL 224 W+ L + R I +S P + PSR G A YL Sbjct: 155 WERLSAAADGDRRRETAAFVREAARAIARWKSWGLTAPMVADPSRGRRDQGQEAFAATYL 214 Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG 284 +AL + + + DP ++ + A Sbjct: 215 AYQRAL-EARNMADFGDLVLKALVLLEDDPRVSRAEAGSVAHLLVDEAQDANAVQVRFAR 273 Query: 285 QLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL 343 L S VG+ G + Q + P LH + + Sbjct: 274 ALAASAESVFAVGDENQNIMAFQGAYPGAM-------QAIAG-----PGATLHVLTRNRR 321 Query: 344 ELENRAVAGVNIEEFSR--SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDP 401 + + ++R + S E + ++ + Sbjct: 322 CTDEILRPANEVVRWNRGSRRGALVSGRSGPAPQVVAYDSEVAEAHGIAKAAKQLIAD-- 379 Query: 402 TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP 461 P I V+V P+ A +P+A+ R + ++ L L Sbjct: 380 GTDPSKIAVLVRSAWVLKPY-----EEAFLRAKVPFAVVGGRNALDREEAKDVVAFLRLA 434 Query: 462 DSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQ 521 S + + P Sbjct: 435 TSPRDDLAFRRIANKPARG----------------------------------------- 453 Query: 522 HTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQE 581 + ++G+ S + ++ L E+ L L L L + A Sbjct: 454 --LGQAVVEAVVGHVSASGRTFHEACLAVAEAGHLEPRACEGLEILAEGLRLLYARAAGT 511 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL 641 +P L +E + + A+ L+ + L Sbjct: 512 KPDGLVEIAVTRTGYEEHLDRSEGDR--KERRATVAMLRRSARDAE-----DLTEFLETL 564 Query: 642 AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 A D E R A V I T+ + + F V L GV+P A + Sbjct: 565 ALMSDLEFEGLREGA-RVKISTIHAAKGLEFDEVFLPCWESGVFPNPRAVD----EGVRG 619 Query: 702 KRGDRSR------RDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--FPSVLVQELID 753 + GD D++R L AL A+ +++SY I + PS L+ E Sbjct: 620 RPGDPWNGPIGGGVDEERRLAHVALTRARHGVHVSYATARIGFGAFLGAGPSALLAEADL 679 Query: 754 YIGQSHYLPGDEALNCDESEARVKAHLT 781 + + A S Sbjct: 680 ELTAAPNGDLRPAKATRSSRMPAARGRR 707 >UniRef50_A9VDB1 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9VDB1_MONBE Length = 675 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 52/509 (10%), Positives = 129/509 (25%), Gaps = 80/509 (15%) Query: 223 YLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSEN 282 L + +H + + + + + ++ + Sbjct: 36 TLPFYERYKEHCQRQNWLDFDDQLL--NCDKYLEQNSQIKPFKHVLVDEFQDTNLIQYTM 93 Query: 283 AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDI 342 A +L VG+P A + G + ++ D + ++ + Sbjct: 94 ARRLAADGNLFVVGDPNQAIYSWCGAQP-NIFVRIQK--------DYASNVQQIELRKNY 144 Query: 343 LELENR----------AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR 392 + + + K+ + S Q E+ + Sbjct: 145 RSTKAILKFSSTLICQQQLSSDASQSDSQGTKQATQEQGPDVCLTTYPSLQEELSGIVQI 204 Query: 393 LLAMLEEDPT-LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVL 451 T L D +++ + +LPY ++ + + Sbjct: 205 FSQTANRAKTSLRYSDFAILLRTNATLCNV-----EQELKIHHLPYRLAGKTGPFQSQEV 259 Query: 452 EAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 ++ L L + R +D + I + L L E Sbjct: 260 GDLLAYLRLINDRSDDDDAFKRICN---RPSRGIGVQTLNKLDNLAKEQKTSLFSAAATS 316 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 + ++ A+ + G EL ++ ++ ++ Sbjct: 317 Q------------------------LKPAKSFADLIAELRGRLGNFKELSEYIQMVIKEI 352 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA-QYGD 630 + + A D E T + + +I Q Sbjct: 353 K--------------FEEHVKKTCKAAKTDDEHGENDFTRRWKNVELLIDCATSTQQQQC 398 Query: 631 AVPLSLLRDELAQRLDQERISQRFL-AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 + D++ + + I+ + + + T+ + + + VV + +ND YP Sbjct: 399 QQHGAKASDDVERSIQDLLINFVERYSDGITVSTVHKAKGLEWAVVAVPDVNDHNYPHIN 458 Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLE 718 GD + D++R L + Sbjct: 459 TQHD----------GDDAGVDEERRLLYQ 477 >UniRef50_C0FS43 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FS43_9FIRM Length = 1182 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 95/928 (10%), Positives = 226/928 (24%), Gaps = 159/928 (17%) Query: 119 SDKRKLFQLSSKAADLFDQYLVYRPDW-LAQWETGHLVEGLGEAQAWQAPLWKALVEYTH 177 + ++ SK F + V D + + EG + L + + Sbjct: 252 RSDLEKYESLSKLTS-FCELSVALSDIKYDRLASSRGFEGDPDKLELVKSLREQAKDVVK 310 Query: 178 QLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIH 237 +L + + + IE LE + L + A K + Sbjct: 311 KLCK--QYFFCSPEMMIEQLERTEPMLEE---------VVRLTKQFADEFAA-AKRRKNL 358 Query: 238 LLFTNPCRYYWGDIKDP------AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 + F + + + D + ++ + + + Sbjct: 359 VDFHDVEHFALQILVDEETEKAKKTAEEFRDTFEEIMIDEYQDSNEVQETLLRSISREER 418 Query: 292 ----EQDVGNPLLASWGKLGRDYIYLLSDLES-------SQELDAFVDVTPDNLLHNIQS 340 VG+ + + + +S +Q +D + + + Sbjct: 419 GENNIFMVGDVKQSIYRFRLARPELFMKKYDSYSLEESTTQRIDLHKNFRSREEVLTCTN 478 Query: 341 DILEL----------------------------------ENRAVAGVNIEEFSRSDNKRP 366 DI E A + Sbjct: 479 DIFYKIMARSLGNVEYDAEAALYPGASYPAIEMKKTAGKEETAEEQTKQSIADFTPEILL 538 Query: 367 LDPLDSSITFHVCHSPQR-EVEVLHDRLLAMLEEDP----------TLTPRDIIVMVADI 415 D D + + E +++ + + +++ P DI++++ + Sbjct: 539 ADSNDELLEDTEFSDKKTLEAKIVAEEIRHLMKTQPVTDKATGELRAARYSDIVILLRSL 598 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 ++ + V +P S ++ +S+L L D+ + A+L Sbjct: 599 SGWADSLVEV----LNGNGIPAHTVSSTGYFSTVEVQTVLSMLRLLDNPRQDIPMAAVLR 654 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 P+ T+E L L D + + + + + Sbjct: 655 SPMAGL----TDEELAVL----------RLEDGSVPFHEAVLELAEGLYEEDGQKEISDS 700 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC-RDM 594 +S + Q +++ I + R L + P+ E + + R+ Sbjct: 701 EADSEADQKQGRNADEKTENHIEITAHRKLLKFYKKYKQLRQLVPDTPIHELIEIILRET 760 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ--ERISQ 652 ++ T A Y DEL + E Sbjct: 761 GYGHYVAAMPAGNRRTANLNMLLEKAAAYEKTSYKGLFHFVRYIDELQKYDVDFGEADMV 820 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMN----------------------DGVYPRQLA 690 V I ++ + + F +V + GM D + ++ Sbjct: 821 GENEDVVRIMSIHKSKGLEFPIVIVSGMGKNFNKQDTRSKMVLHPELGIGLDYMDGKKRI 880 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD------------ 738 K+ D ++ + AL A++KL ++ + + Sbjct: 881 KSPTIAKKAIAKQIDLENLGEELRVLYVALTRAKEKLILTGTLKDAPEKLEFFRQQANLS 940 Query: 739 ---NSERF------PSVLVQELI-------DYIGQSHYLPGDEALNCDESEARVKAHLTC 782 + S + ++ D + L+ E++ LT Sbjct: 941 KAADRPLSYLTREGASGYLDWILPAVLSYGDKYPVRIVEAAELVLDEVENQLEQNEDLTE 1000 Query: 783 LHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQR--- 839 + +Q +++ + K + + E E + Sbjct: 1001 RIEEIEAADTQLVGQLKQRFSQRYPYQTDILRKNKYSVSELKHRAMREKFEAEQEETIPA 1060 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN--ALVEQDDAERL 897 F PV + + E + E L R +++ + Sbjct: 1061 FLEEPVTPT------IPLFIQREESVEQETANRGAL-RGTAVHRVMECYDFASEKSVHEQ 1113 Query: 898 FRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 + + +T + Sbjct: 1114 MEAMEKEEKITADMRALVREQTVADFVS 1141 >UniRef50_C5C3C7 ATP-dependent nuclease subunit B-like protein n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C3C7_BEUC1 Length = 1043 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 93/685 (13%), Positives = 185/685 (27%), Gaps = 80/685 (11%) Query: 348 RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD 407 A AGV + + D R + EV ++ ++ T+ Sbjct: 238 LAEAGVEVPQERADDGARLGPAPPVATYVRHASDADDEVRLVA---RELVATLETVPAHR 294 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 V+ A Y+ + + + R + +F++LL LP +RF Sbjct: 295 AAVLYAGASPYARLLHERLETV----GIRVNGPGVRGVAERAITRSFLALLRLPQARFAR 350 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 DV L + D + + Q + + G D D + Sbjct: 351 ADVFRALADAPVRTS-DGSPVPVARWEQVSRLAAVVEGTDWDARLRDWAARQHRVAETER 409 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 +E+A + ++ G + V +L WR A L Sbjct: 410 AADDPRPAVLEAADRDVETAEAMRREIGALIADVTRGT----ELRTWRELAAWALDLLAA 465 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 D L + AA+T + + + LS + + L++ Sbjct: 466 RYGESDDLRRLPPEEQYAAAALTSALRGLEVLDD------VDPVADLSTAVEAIELELER 519 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP---KRG 704 V + L + + VV ++G+ + YP +L + + Sbjct: 520 AVPRVGRFGEGVYVGPLGEVAGLDADVVFVVGLAEDAYPGRLRADALLGADARAATDRLA 579 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 DDR+ L +A ++ ++ ++ ++ER P+ + + + L Sbjct: 580 PARTWIDDRHRALLGAFAAAPRVVATFPRGDLRRSTERLPTRWLLPTLRALASDRDLAVT 639 Query: 765 EALNCDESE------------ARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQ 812 + P AR+ L Sbjct: 640 DWDTIRSPHLTGSPSFATELTTTPLPADEQEWRVRAASAGALVPDAVVDAARDLLAGRRG 699 Query: 813 AGKAHSEFVQPLPFTLPET------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 G + + LP+ V +L+ F P F Q L+V Sbjct: 700 PGLSRYDGDLSASAGLPDHATGTPVVSPTSLESFAECPHAWFVQRLLRVQPLELPE---- 755 Query: 867 TEPFILEGLSRYQINQQLLNALVE--------------------QDDAERLFRRFRAAGD 906 E + L + L+ LV + + R G Sbjct: 756 -ETVTISPLEIGTLVHACLDRLVRTSEALPANGAPWSAADRARLAEIFDTKAREAARRGA 814 Query: 907 LPYGAFGEIFWETQCQEMQQLADRVIACRQ----------------PGQSMEIDLACNGV 950 + E+ E +++ ++ D A R + + + + V Sbjct: 815 TGHARLWEVEREALLRDLGRMLDDDDAWRASRGATVLASELTFGTDGAEPVRVAVPGGAV 874 Query: 951 QITGWLPQVQPDGLLRWRPSLLSVA 975 + G +V G + + Sbjct: 875 ALRGSADKVDRAGDGTLIVTDVKTG 899 >UniRef50_Q83G17 Putative DNA helicase II n=2 Tax=Tropheryma whipplei RepID=Q83G17_TROWT Length = 973 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 79/787 (10%), Positives = 187/787 (23%), Gaps = 137/787 (17%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRD 309 + LA+ + ++ + E +F + VG+P A +G G Sbjct: 245 CRQTHVLAEFQEKIAYVVLDEYQDTSPIQVEFLKTIFGNRCRVLAVGDPRQAIFGFRGAS 304 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 + + ++ +IL+L N + + Sbjct: 305 VANIANFARDFVS----NKQYELSISWRNDKNILDLANHISPKIRPLH-------PRPEA 353 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 D S + V P++EV L +++E+ V+ Sbjct: 354 NDGSTSLEVYTDPEQEVHEGALWLNSVVEKGTA------AVLTRTRSRLISV-----SRV 402 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 + + Y +D P + +S + + + L L+ P R+ + Sbjct: 403 LDEIGVSYTRADVNIFYE-PEVVDILSCMRIISGVNENLSFLRLITGP----RWQVGISD 457 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 L LR ++ + + + + R+ + Sbjct: 458 LHALRGYI---------------AVGKKNLDRISLLEAVNRINI---------------- 486 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + + + E L L + E + + LN + + Sbjct: 487 --QKTPMSCEGKKRLEDFLEFFRKIKGLSFL--SPLELAYLIEESLN--LDIEVQMSHRG 540 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL---AGPVNICTLMP 666 +IA G LS + +++ G V + T+ Sbjct: 541 RENLDALYELIASFRGD------NLSEMLAWFDSLEEEDAFRGPTKQSCPGQVELFTVHS 594 Query: 667 MRSIPFKVVCLLGMND---------------GVYP--------------RQLAPLGFDLM 697 + + + V L ++D G+ P + Sbjct: 595 AKGLEWDWVLLPFLDDFPAKSREKSGWLSKTGLLPFCLRLDRESLPEFYFHKCSDSKEYR 654 Query: 698 SQKPKRGD---RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 + + + D + + ++R L A+ A+Q L IS R + P ++E+ ++ Sbjct: 655 AARRQYEDDVLQHQIREERKLLYVAVTRARQGLRISASAR-------QKPGQFLREISEF 707 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG 814 + + + + +S Sbjct: 708 LQTDLPQAVHNNPKKRVGYWPLDSLGARRKRVKLAAAAVHNRSIEESEESLKKEPLKALI 767 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 + + + + L + P ++ Sbjct: 768 AGMLKELDISVDKPEKRISATALSK--KDPNVFLL--------PQPP----------IKN 807 Query: 875 LSRYQINQQLLNALVEQDDAERLFRRFRAAGDL--PYGAFGEIFWETQCQEMQQLADRVI 932 + + P + F Q Sbjct: 808 AWLGVAFHAWIENYYSTYSDMLFHENSADEYGISGPVFEQSQRFSPELDQLRHNFMQSEW 867 Query: 933 ACRQPG-QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASG 991 + ++P + ++ V + + V DG R+ + L Sbjct: 868 SYKKPIAVELSLEWLIGDVIVPCTIDAVFFDGD-RYTILDWKSGLSSNQYRIQLSLYRLA 926 Query: 992 GNGESRL 998 + Sbjct: 927 FAEWKGV 933 >UniRef50_C8W759 UvrD/REP helicase n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W759_ATOPD Length = 1165 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 138/1215 (11%), Positives = 300/1215 (24%), Gaps = 265/1215 (21%) Query: 7 SNRLDVLEALMEFIVERERLDD--P----FEPEMILVQSTGMAQWLQMTL---SQKFGI- 56 S + L + + ++ D P + +I+ + A ++ + +K G+ Sbjct: 29 SGKTFTLTQRIVWALKEGSGADGKPYLSSLDQALIITFTNAAATEIKERVREALEKEGLH 88 Query: 57 AANIDFP-LPASFIWDMFVRVLPEIPKESAFNKQS-----MSWK------LMTLLPQLLE 104 +A + S I M R+L + + + M+ + +L +L + Sbjct: 89 SAALQVDDAWISTIHGMCSRILKIHALDLDLDPEFEIIDDMTRNQLVTISIEEVLRELSQ 148 Query: 105 REDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAW 164 E + + D K S+ L Y P + L +A Sbjct: 149 DESYAEFLSTYAGNRDALK-----SRIETLIS-YAQSSPLGIDSISFVGDSSDLDVLKAE 202 Query: 165 QAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYL 224 L AL + + + + A Q L L + + +L Sbjct: 203 LESLCGALEAFKAAIAEKKPDEAEQLQSVQSEL------LSKLQQHLVL----SLTDFDQ 252 Query: 225 QALQALGK-------------HIEIHLLFTNPCRYYWGDIKDPAYLAK------------ 259 +ALGK + + C +G I+D + + Sbjct: 253 AFWEALGKAVKAVRSSKEIKMVRDEAVYQLKVCSSLFGLIQDVSEGQRLKDVTEQVYKLF 312 Query: 260 --------------------------------LLTRQRRHSFEDRELPLFRDSENAGQLF 287 + + ++ + + + L Sbjct: 313 KQKKLAIGGLDNDDLLHLTAKVFEEHPEIAAVYTDKFKLVMVDEFQDTDQQQVQMIKSLS 372 Query: 288 NSDG--EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL 345 D VG+ + + G D P++L + + Sbjct: 373 GKDAQYLTTVGDAQQSIYRFRGADVDVFFRRQAEV----------PEDLQPRLVDNFRSH 422 Query: 346 ENRAVAGVNIEEFSRSDNKR--PLDPLDSSITFHVCHSPQR--E---------------- 385 + + T + HSP+ E Sbjct: 423 NEILRFVAKVCSADGMIADFMDLSAGREEPTTPFIAHSPRVYFEVTKFVKSGSSKPGDDI 482 Query: 386 ------VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 L DR+ ++ +D + +D+ ++++ + P+I A + + Sbjct: 483 SRKQLVAHQLADRINTLM-QDENIQAKDVAILMSSVKEAQPYI-----EALRTFGIESVV 536 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNE 499 S P +E SLL + + S + L + + F++ L L E Sbjct: 537 SGASTFGEQPEVELIGSLLQTLANMYDSYEGLFPVLS---SEIFNLDASDLLLLGTNFGE 593 Query: 500 SGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAE 559 +G + D + E Sbjct: 594 NGQKITNRDIAESLVNDAFNPPF------------------------------------E 617 Query: 560 LVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD--MLNAFFLPDAETEAAMTLIEQQWQ 617 + L + L L+ R L+ R + V D ++ E ++ + I + Sbjct: 618 ISLKLKNALEILSDARSSLSNNRVSDVLKKVVLDAGWISRLQNKGNEGQSKIANIFAALE 677 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL 677 I + G A + + ++ V T+ + + F VV + Sbjct: 678 QIDSLQKELSVGIASVAKAFSEWCGTAKESPKVLHSSTQNAVTFMTIHASKGLEFPVVAV 737 Query: 678 ------LGMNDGVYPRQLAPLG------FDLMSQKPK------RGDRSRRDDDR------ 713 + G P F S+K K + D+ + Sbjct: 738 VGAVSGPKASAGGEPFLHVKKDNSYQIAFSSSSKKLKNLYDGCHEVPTSIDECKNLLKWR 797 Query: 714 ----------------YLFLEALISAQQKLYISYIGRSIQDN--------------SERF 743 AL A++ + ++ ++ E Sbjct: 798 MFLEAQENEAEEQEQNRCLYVALTRAREAVILTSTIDLTKEGISPRYTRKITDALFEETP 857 Query: 744 PSV----L-----VQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 S + + + S + E + + + Sbjct: 858 LSAGEHLFEYGGNLAGCMRVVEGSGKKDEPIQVEGLELVEPSDVNPREEKYSQAVETFDI 917 Query: 795 QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQ 854 S A E + ++S Q + + + F + Sbjct: 918 YEKAELSVASETTYDQRKGFFSYSSAHQQMAENFESENNQKLEEEFKG------VSQGHE 971 Query: 855 VNFRTEDSEIPDTEPFIL-----EGLSRYQINQQLLNALVEQDD--AERLFRRFRAAGDL 907 + +E P L + S +L +VE E++ R + Sbjct: 972 ADNPQPATEASVVLPGTLADDGVDPTSLGSAFHELAQIMVETQSKVDEQIIDRLCLKNSV 1031 Query: 908 PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN---GVQITGWLPQV-QPDG 963 P A + + ++ +A L + G + G + + G Sbjct: 1032 PQRAVSRVKQALELWSNSEIRQEALAHDVVIAESPFTLQVDSEYGNYVEGAIDLLAYNRG 1091 Query: 964 LLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRK---DGEWRFPPLAAEQALHYL 1020 + + N + + +++ E F + E+A Sbjct: 1092 SKDALVVDYKTGDKGLSAAQIYEHHQMQANFYAYVLMQRGFTKVECAFVCVEIEEAGQ-- 1149 Query: 1021 SQLIEGYREGMSAPL 1035 + + P Sbjct: 1150 PHVARYAFDANHQPQ 1164 >UniRef50_C9LTM8 ATP-dependent nuclease subunit A n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LTM8_9FIRM Length = 1251 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 79/870 (9%), Positives = 199/870 (22%), Gaps = 190/870 (21%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR 308 G+++ A L + ++ + + D VG+ + + Sbjct: 384 GELRPSAQALALREKYEEVMVDEYQDTNGVQEAILSLVARDDNLFAVGDVKQSIYRFRLA 443 Query: 309 DYIYLLSD-------LESSQELDAFVDVTPDNLLHNIQSDILELE------NRAVAGVNI 355 D L E +D + + + I Sbjct: 444 DPQLFLKKQREYPTLGEKYARIDLSENYRSRAGVLAAVNWIFSQLMTPEAMELTYDDAAA 503 Query: 356 EEFSRSDNKRPLDPLDSSITFHVCHSPQR------------------------------- 384 F+ + L ++ H+ S Sbjct: 504 LHFAALYPEDSPKSLAGAVELHIIESDAESSVEPEEEDEEKAETSAVADGGAETPEGEEE 563 Query: 385 --------EVEVLHDRLLAMLEED---------PTLTPRDIIVMVADIDSYSPFIQAVFG 427 E + R+ ++E L RDI++++ + + + + Sbjct: 564 EELKGFALEAAFIARRVRELMESGALVADKDGYRPLRWRDIVILLRAVRTKADILL---- 619 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 D +P + + +++L++ D+ + A L P++ Sbjct: 620 ETLRDADIPAYATLDAGYFQATEVRVVLAVLAVIDNARQDVPLAAALCSPIVG------- 672 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 L A + Sbjct: 673 -------------------------------------LSVSELAELRLAALEEDIFGALL 695 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + D ++ A L + + L L WR + + E + RD ++ Sbjct: 696 VVNDPAAKFSASLREKVDAFLRLLKGWRDLVRRVSVPELIWQIYRDTGYYDYVGGMAGGL 755 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ--RFLAGPVNICTLM 665 + + + +++ Q ++ V I T+ Sbjct: 756 LRQANLRMLADRARDYEETNFRGLFRFLRFIEKMQQMETDLSAARTLGEGEDVVRIMTIH 815 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPL----------------------GFDLMSQKPKR 703 + + F VV + G+ + + +R Sbjct: 816 KSKGLEFPVVIVAGLGSKFNMQDASQDLLMHRELGLGLYRTEREKSLRYSTFAREAVAER 875 Query: 704 GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS------------------ 745 R + ++ + A+ A++KL + + + +E + S Sbjct: 876 IKRESKAEELRVLYVAMTRAREKLILVGSTKKLAACAEGWCSFVTQTERALPAHAALAAN 935 Query: 746 VLVQEL---------------IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFD 790 + L + + P E + + E + + + + D Sbjct: 936 SFLDWLGMTVARHADGAPLREKAALLEKRVAPEGEDDSRWQVEIVPASAVASVSAAVAED 995 Query: 791 PQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAF-- 848 + ++ R ++ +P + + L+R ++ A Sbjct: 996 NELFEKLRRGEPLEASEEKDDVEQMLAWQYAPHGVDNVPAKLSVTELKRRFSVEDAAEEK 1055 Query: 849 ----FQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD-----AERLFR 899 + + E L + +L + D E+ Sbjct: 1056 AYIPLKEVHGSSKNVFKRPDFMQEKAGLSAAEYGTLMHAVLQHIDLAGDTGREGLEKQLA 1115 Query: 900 RFRAAGDLPYGAFGEIFWETQCQEMQ-QLADRVIACRQPGQSMEIDLACN---------- 948 L + + +Q L R+ R+ + Sbjct: 1116 NMVEKELLLPEQAKAVRLDAVASFLQSPLGTRMKKARRLWHELPFSRRLEAHSFYPEAEP 1175 Query: 949 --GVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 + + G + + D + Sbjct: 1176 EARIFVQGVIDVLFEDEAGALVLLDYKTDK 1205 >UniRef50_Q6G1D2 Putative uncharacterized protein n=1 Tax=Bartonella quintana RepID=Q6G1D2_BARQU Length = 1039 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 119/1006 (11%), Positives = 240/1006 (23%), Gaps = 141/1006 (14%) Query: 126 QLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPL-WKALVEYTHQLGQPRW 184 L+ A L D+ A W + A+ WQ L + +V Sbjct: 146 WLAQDLAHLMDEIETE----AANWSKLKDIAPDMVAEWWQITLDFLTIVTQNWPQILKER 201 Query: 185 HRANLYQRFIETLE--SATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTN 242 R+N + + L+ + T + G+S P L+ + Sbjct: 202 QRSNPAEWRNQILKMHAETLYRTQPEKPILAAGVSGSIPAVSDLLKVVASL--------- 252 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS 302 P L + E G+P Sbjct: 253 -----------PKGAVVLPGLDLHMDEDQWNALGTTHEEKKTFDSFDHAANVFGHPQY-- 299 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 ++ L L Q + + + + E A + R D Sbjct: 300 -------HLKKLLSLMKCQRIHVREIGQQSTIKAKRAALLSEAFRPASTTDRWIQIVRDD 352 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 + +F + + E + L +E+ ++ D + + Sbjct: 353 YENLCADW----SFIEAINEREEALAISVALRNAIEDPQKTA----ALITNDRN-----L 399 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 + + S LL L+LL P+ Sbjct: 400 ARRVAAELKRFGIEANDSGGIPLAQTLPSTLLRLLLENVFQP-DPIAFLSLLKHPLTK-- 456 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 + ++ R +N L + + L + + Sbjct: 457 --------------LEQNRPRLREMAENFELFVLRKSTGRINLCECDQFLEKWIKTYSHD 502 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 +++ + L L + L +E + E ++ F + Sbjct: 503 TFENSTLDQQKCEEARLLCYLLKKAVEPLASLITQ-RKECTINEVAIATVEVFENFGRDE 561 Query: 603 AETEAAMTLIE--QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PV 659 + + E Q + E + Q G L + + ++ + Sbjct: 562 NNSLVNLYQHEAGQALSTFLCELVSDQSGLKFQLREWPAMFSALIATRSVTPSPGGHPRL 621 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA 719 I + R V + G+N+G +P F K +R + L A Sbjct: 622 FIWGTLESRLQTVDTVVIGGLNEGSWPITARNDAFLSRQMKMMLTLEPP---ERRIGLSA 678 Query: 720 ----LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEAR 775 K+ +S R ++ PS +Q L IG+ Sbjct: 679 HDFQWAMGMNKVVMSRALR--VNHVPSLPSRWLQRLETVIGK------------------ 718 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLE 835 Q GE + + + + A P P + Sbjct: 719 ------------QVWKQIRTRGEILLHWAKMIDNTNMTACATRPCPIPPLKMRPRHFSVT 766 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL---VEQD 892 + P + + L++ PD R + +L A V+ Sbjct: 767 EIPTLRYDPYAIYAKKILRLKPLKALIHDPD-------AAERGTLYHAILAAFCTQVKNP 819 Query: 893 DAERLFRRFRAAGD------LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEI--- 943 + G I+W + L + + E+ Sbjct: 820 NTANALDVLLNIGRKEFDKLNLPADIEAIWWNSFENFAPFLIQWEQSLEPRKRYAEVVSQ 879 Query: 944 DLACN--GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLR 1001 + GV ++G ++ + + + Sbjct: 880 KIPIGTTGVTLSGRADRIDVLPGKMVEIFDFKTSTPPSS--KQVRDLLFPQLALETALFM 937 Query: 1002 KDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDD 1061 + F L I +G AP +L + G +++ + A Sbjct: 938 QGAFTDFQDLTPTNLF-----YIALNGKGEIAPQSILLKKGKKDIQSAINLGEKAWKHLI 992 Query: 1062 STLQKARTKFLQAYEGNMMVRG---EGDDIWYQRLWRQLTPETMEA 1104 + ++ + Q Y + + EGD RLW + Sbjct: 993 ALIEYYQNP-QQGYLSHAVPLKKEYEGDYDHLARLWEWSSSLHKAG 1037 >UniRef50_Q0ATK6 Putative uncharacterized protein n=2 Tax=Hyphomonadaceae RepID=Q0ATK6_MARMM Length = 1016 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 113/994 (11%), Positives = 242/994 (24%), Gaps = 153/994 (15%) Query: 10 LDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFI 69 L VL + + D +IL + A+ L ++ +A N LP Sbjct: 23 LRVLATTLREEFDAAGDPDALTRLLILTPTRRAAKALGDVFAE---LAGNGVALLP---- 75 Query: 70 WDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSS 129 + + + F ++ +R+ ++L+ Sbjct: 76 --LIRPIGDVDVDDPPFEPGELA-------------GLAAPAISI------ERRRYELAR 114 Query: 130 KAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANL 189 L + + RP L L + L A + + L Sbjct: 115 LI--LAKEAALGRP--LGVGGALALSDSLAALLDDLAT-----EDVSDLSDLQDAVTTYL 165 Query: 190 YQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWG 249 E +E P+R+ G++ ++L H + P + Sbjct: 166 PADRREAVEFIDIVQRVWPARLAELGLTDAAAR-----RSLILHELVARWTKQPPDHPVL 220 Query: 250 DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD 309 + + + + + + + D +D +P A Sbjct: 221 AVGSTGSIPAARKLMKVIANLPQGAVVLPGFDWDADASAWDSIKDD-HPQWA-------- 271 Query: 310 YIYLLSDLESSQ-ELDAFVDVTPDNLLHNIQSDILELENRAVAGV----NIEEFSRSDNK 364 L+ +L + ++ ++ D+L + I E A I E Sbjct: 272 MKTLVDELGVDRLQMPSWPGAAEDSLAERRRRLIAEALRPADTTDEWLKRIGELQGRFGD 331 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 + + ++ E L +LE P ++V + + Sbjct: 332 SFFNDGMTGLSLVETADEISEARACALMLREVLET-----PDRTAILV----TPDRMLAR 382 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 + + S A LL + + AL P+ A Sbjct: 383 RVSAEMTRFGVRLDDSGGAALAETMAGAFLTRLLDVALDCGRVVALTALWGSPLFRAGHR 442 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 + + +R ++ + GQ+ F R + ++ Sbjct: 443 RGQT--HTVLAKFEAEALRGARPGRDLAAVRARLDGQYVRLFDEDRATINAILDQLDTSL 500 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE 604 +L + S A+ + + A+ Sbjct: 501 AGLLTPGKRSASAWARAHAEAA-------------------------EALASDDSGSGAQ 535 Query: 605 TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG-PVNICT 663 E + + ++ + L + R++ R + + Sbjct: 536 AVWVGEGGEAAAGLLRSLLEESESLPDMSLPEYAAAFGEMCRSRRVAPRLGVHPRLQVLG 595 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLE----A 719 + R I V L G+N+GV+P + + G + +R L A Sbjct: 596 PLEARLITADRVILAGLNEGVWPPGPGADPWLSPGMRRTVGLGAP---ERRYGLAAHDFA 652 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 ++A + ++ G+S + S S + L + + A + A + Sbjct: 653 QLAAAPDVIMTRSGKS--EGSPTVASRWLWRLKTLARGALGAAAEAAFAPETDYAALSRR 710 Query: 780 LTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQR 839 L + A P P + + ++ Sbjct: 711 L--------------------------DDPGAPPRAAPRPQPAPPVPVRPRQMSITEIRT 744 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL---VEQDDAER 896 + P + + L + PD R L A+ E Sbjct: 745 WVRDPYSIYARHVLGLRRLDPADMPPD-------ARERGSALHDALEAVVPAWSDGIPED 797 Query: 897 LFRRFRAAGDLPYGAFGE------IFWETQCQEMQQLADRVIACRQPGQSM--------- 941 ++ A +L G + + L R G + Sbjct: 798 AVKQLVAHAELKLAEAGFGPEEMVLERARFERAASWLVGWEAERRARGIHLDKVEIFGSM 857 Query: 942 EIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVA 975 + +TG + R Sbjct: 858 PFEGPAGPWTLTGRSDRFDRHPDGRLDIIDYKTG 891 >UniRef50_A7BEI5 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BEI5_9ACTO Length = 1078 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 106/890 (11%), Positives = 219/890 (24%), Gaps = 110/890 (12%) Query: 193 FIETLESATTCPPGLPSRVFIC--GISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGD 250 I LE P P + + I AL + A + + P D Sbjct: 211 IIAALEEGHERSPEYPRTLRVDLSRIQALAADLIDAWEQDAPKRGVQAPCPVPDVVIVDD 270 Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 ++D + +A G G + Sbjct: 271 LQD--------------------CTPSTLRLLRACRGAGARIVAFSDSDVAVAGYRGGEP 310 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK-RPLDP 369 L+ V++ ++++ + EL +A A + D Sbjct: 311 -----HLDRRLASALGVEIAELGQVYDMSRAVRELARQACARIAQSGSPARREAGVADDA 365 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 + ++ H+ +P + ++ L + + D +V+V + Sbjct: 366 PEGALVTHLGATPSQMGALIARALRS-HHLHDGIDFSDQVVIVRSSSMVAET-----SRY 419 Query: 430 PADRYLPYAISDR-RARQSHPVLEAFISLLSLPDSRFV------SEDVLALLDVPVLAAR 482 A +P A R + P + L+++P E LL P++ A Sbjct: 420 LARGGVPVAGGGRAFDFATQPTTRLLLDLVTMPTGTSDTDVAQRRELAERLLPSPLVRAD 479 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 LR L ++ G + + L A + + + Sbjct: 480 ALAIHRLLRRLNAARAQAAEEAGGESAPIP---LTAADLVSDPQTWRPFIEQAEQAGGKR 536 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 + + ++ + EW + D Sbjct: 537 ARAATMLARPLETAARLWELGMSGSVRPQERLWSLWEASGVAGEWR-------SRAIASD 589 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD--QERISQRFLAGPVN 660 + ++ + + Q A EL G V Sbjct: 590 DSSGWYDDQLDAVVALLRVADVWEQRNPAGSAVGFASELLAGSVPIDTISRVGVRPGGVE 649 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP------------------- 701 + T ++VV L G+ DG +P Sbjct: 650 VLTPAQAMGRHWQVVVLAGLQDGAWPNLRLRDRILRADLLADVGAGRVAVGEDGREELID 709 Query: 702 --KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 + R+ DD+ LF+ A+ ++ S + + + PSV +L+ Y+ +H Sbjct: 710 STRAARRAVLDDEYRLFVAAVTRSR-----SIVHAGAVRSEDAAPSVFF-DLVAYLAGTH 763 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 ++ E+ + H+ L R + + + + H Sbjct: 764 RENDIVPVDPVEAPLSLSGHIADLRARAANSDEPADAQLAATLLALMAREGIASAQPHRW 823 Query: 820 FVQPLPFTLPE------TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE 873 T + + +R A P+R F Sbjct: 824 LGAGGTPTSAQDYRGQIVLSPSQFERALACPLRWFLTTIGADAPSN-------------A 870 Query: 874 GLSRYQINQQLLNALVEQDDA---ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR 930 S + + E L R G G + + + LA Sbjct: 871 AASLGTLVHAVAEEHPHGTPEELTEALEARIEELGYNLDTWAGRVSDRHAREIVNNLASY 930 Query: 931 VIACRQP-GQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLW------LE 983 V+ + GV I G + +++ R + L + + Sbjct: 931 VVGVPGEVTVEQTVSSEVEGVTIRGRMDRLEQVDEG-VRVTDLKTGKSGYTKASVAENPQ 989 Query: 984 HLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSA 1033 Y + ++ + + +E +RE + Sbjct: 990 LAAYQMAMLASGEKVAGARIALLGGSKPQIYDQPALQGEELERWRESVRE 1039 >UniRef50_B8FXD7 ATP-dependent helicase/nuclease subunit A n=2 Tax=Desulfitobacterium hafniense RepID=ADDA_DESHD Length = 1392 Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 75/726 (10%), Positives = 181/726 (24%), Gaps = 71/726 (9%) Query: 161 AQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP 220 Q + KA + H A + + V + + Sbjct: 358 TQHFAREYQKAKRQRNCVDFSDLEHYALQLLAKDKQPTEIALKLQAYYAEVLVDEYQDIN 417 Query: 221 PVYLQALQALGKH----IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL 276 PV + LQ + + + ++ Y + DP + + P Sbjct: 418 PVQERILQLVSRQEEGKANLFMVGDVKQSIYRFRMADPGLFLRKYGEFPHYQEGGGAAPN 477 Query: 277 FRDSENAGQLFNSDGEQDVGNPLLASW----GKLGRDYIYLLSDLES------------S 320 N + Q + G++ D L Sbjct: 478 LVIDLNQNFRSRPEVIQGINYLFYQIMTEGAGEIVYDEQAALRPGAKFVSDGELRTAEGP 537 Query: 321 QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCH 380 E+ F D L + + + E N+ P D S + Sbjct: 538 IEVHLFDPKAIDLSLGQ-KRGAEDAATEVDSPAKGEGEEFEQNREPESGDDES-SLEEAE 595 Query: 381 SPQREVEVLHDRLLAM------------LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + + E ++ R+ M L + + DI++++ + S + +V+ Sbjct: 596 TARIEARLVAARIQKMVLEREFQIHDKELGDYRPVQYADIVILMRSLAS----VASVYAE 651 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 +P ++ +SLL + D+ + A+L P++ + Sbjct: 652 EFQKAGIPVYAETNSGYFGTNEVDTVLSLLKIIDNPRLDIPFAAVLRSPLVG----MNGT 707 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 L LR + + + H + + +L + + Q + Sbjct: 708 ELGKLRSLLPQGDFYETLVLTFWAGDAHRQEEGHEFYSEIREIL----GKHWESLPQLEV 763 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAA 608 E+ + + +L WR + + + D ++ A Sbjct: 764 KVRHILETSPEIKEKVDAFFPKLQEWRHRSRRTSLADLLWHLYEDTGYLAYVGTLPAGAQ 823 Query: 609 MTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS--QRFLAGPVNICTLMP 666 + Y ++ + + V T+ Sbjct: 824 RQANLRVLYDRACRYEATNYRGLFRFLRFLEKFQSQGKDLGNASIVGEKENVVRFITVHS 883 Query: 667 MRSIPFKVVCLLGMNDGVYPRQ----------------------LAPLGFDLMSQKPKRG 704 + + F VV + G+ R + +R Sbjct: 884 SKGLEFPVVFIAGLGKKFNTRSLSSQLLLHSHLGVGIPLIDIENQVRYPSVIQYAVKERL 943 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 + ++ + AL +++L++ + + ++ S+ + Sbjct: 944 WQEALAEELRILYVALTRGKERLFLFGHQHKLAEAINKWRSLALSCPDTAFPDGQLRGAK 1003 Query: 765 EALN-CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 L+ + R L L + + + + + +A S + Sbjct: 1004 TYLDWLGPALVRHPEDLFKLGSFPTASELPDSSSQWKVILHDQIAGKGPVQEATSSQDEI 1063 Query: 824 LPFTLP 829 + Sbjct: 1064 ILPDQE 1069 Score = 48.8 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 30/294 (10%), Positives = 72/294 (24%), Gaps = 38/294 (12%) Query: 99 LPQLLEREDFTLLRHYLTDDSDK-RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEG 157 L L+E ++R + D ++ L + + + A+L + Y P + Sbjct: 207 LDDLMESPWGQVVRQGVRDKVEEGLILLERAYRLAELPGGPVHYLPVLEDDQSRLGFLRE 266 Query: 158 LGEAQAWQ------------APLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPP 205 + E W L + + + L + + + A Sbjct: 267 MAEKGTWSDIETAFKSAAAFPGLPRGSKKNLPDSLIDEENSKRLREESKKARDEAKKKLE 326 Query: 206 GLPSRVFICGISALPPVYLQALQALGKHIEIHLLF--------------------TNPCR 245 + + VF ++ P + + +G ++ F + Sbjct: 327 EIKNTVFSVPLTDQLPFLNKMGELVGTLAQVTQHFAREYQKAKRQRNCVDFSDLEHYALQ 386 Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA----GQLFNSDGEQDVGNPLLA 301 D + KL ++ + Q VG+ + Sbjct: 387 LLAKDKQPTEIALKLQAYYAEVLVDEYQDINPVQERILQLVSRQEEGKANLFMVGDVKQS 446 Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI 355 + D L P+ L+ ++ + + Sbjct: 447 IYRFRMADPGLFLRKYGEFPHYQEGGGAAPN-LVIDLNQNFRSRPEVIQGINYL 499 >UniRef50_Q67MD5 ATP-dependent helicase/nuclease subunit A n=1 Tax=Symbiobacterium thermophilum RepID=ADDA_SYMTH Length = 1371 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 79/796 (9%), Positives = 178/796 (22%), Gaps = 160/796 (20%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF-----NSDGEQDVGNPLLASW 303 + L R R ++ + + VG+ + + Sbjct: 388 DRLVPSDVARDLRARYREILVDEYQDINGVQDAILTLVARDGQEGPPNRFMVGDVKQSIY 447 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS-- 361 D L+ + + + + ++ E A + S Sbjct: 448 RFRHADPGLFLAKYGAYRPWAGAPEPGAAGARIVLGANFRSREGVVNAVNFLFRQIMSAR 507 Query: 362 ------------------DNKRPLDPLDSSITFHVCHSPQR------------------- 384 + + + H+ ++ Sbjct: 508 AGELDYDRDAELVYRAGYPPLPGEEAAEPPVELHLLDGEEQGPADGAGSGQAPAASGPEA 567 Query: 385 ------------------------------EVEVLHDRLLAM----------------LE 398 E ++ R+ AM L+ Sbjct: 568 ASGDGVAGEADGEEEDPALAELADLTAMEREARLIAARIRAMVDGTADQPPVQVWDRKLK 627 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 L RDI +++ I V + +P ++ F+SLL Sbjct: 628 TYRPLQYRDIAILLRATTGRINTIIEV----LSQSGIPAYGQVSTGYFQATEVQVFLSLL 683 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR------QWVNESGIRWGIDDDNVR 512 + D+ + A+L P++ + L +R + + Sbjct: 684 QVLDNPLQDIPLAAVLHSPIVGL----SAADLARIRLANPRGSFYDALVAAAAPASGAAM 739 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 A A + ++ L G L L L+ Sbjct: 740 AEAAAAPASEAAMAEAAPAPASGAAMAEAAAAADPAEAGATTSTAPGLEGVLVRFLECLD 799 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 WR + + + ++ ++ A E Sbjct: 800 RWRTLARRRPLSQVVWQILQETGYLHYVGGMPGGAQRQANLLALYERAREFDQFARQGLF 859 Query: 633 PLSLLRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG------- 683 + L + V I ++ + + F VV + G+ Sbjct: 860 RFLRFIERLQAEQSDMGTAPALGEGEDVVRIMSIHKSKGLEFPVVFVAGLGSSFSDRDLR 919 Query: 684 ---------------VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLY 728 V P + + ++ + AL A+++L Sbjct: 920 GDLLLNRDLGFGPQVVDPGTRLKYPTLAYHAVREVTRLANLAEELRVLYVALTRARERLV 979 Query: 729 IS------------YIGRSIQDNSERFPSVLV--QELIDYIGQSHYLPGDEALNCDESEA 774 + + + S+L+ + +D+IG + D A + + Sbjct: 980 LVGSVKSLRAACARWSRGAGAPGWPLPESLLLSARSYLDWIGPAVLRHADGAPLRELAGE 1039 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPL 834 A + + DP ++ + + + +A V E + Sbjct: 1040 GGTAPGSGPDPALAGDPSRWEVTIWDPASLQQI--LQPRPEAAPPAVDWARIGAAEPLDR 1097 Query: 835 ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDA 894 P+ RL+ F PF +++ L + D Sbjct: 1098 ---------PLDEALHARLRARFGWRY-------PFEPVVRRFGKLSVTELKGYFDPDAE 1141 Query: 895 ERLFRRFRAAGDLPYG 910 A ++ Sbjct: 1142 APAEEMAPPAEEMAPP 1157 >UniRef50_UPI000050F874 UvrD/REP helicase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F874 Length = 1086 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 89/871 (10%), Positives = 200/871 (22%), Gaps = 143/871 (16%) Query: 198 ESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYL 257 + T P +P+ V G+ P L+ L + LF +P + + Sbjct: 246 RAWTFAPDVVPTVVLADGVQDFPAASWGLLEQLRERGSALALFGSP------ETVTGRFH 299 Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL 317 + R + ++R + +D VG+ D+ ++ Sbjct: 300 GADASIIDRSASDERFTTVVLPEVKNT----ADELVAVGD-----------DFGRRITTR 344 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFH 377 Q + + V+ P+ + H Sbjct: 345 WGLQHMPRPDGAARTGE-----------SADGIEPVDAGPQQGEGEPEPVASSPDKVETH 393 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 V L R+ + + D+ V+ + + V + + + Sbjct: 394 VFEGAASSYRYLARRVTNFV--EDGHAWSDVAVLCRNTST-----ARVVANELSASGVAT 446 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 A + P + LL+ E + A + + +R ++ V Sbjct: 447 ANIMQ-PLSIDPATAPLLELLARTPDFDDDESIAAQALSLAGSIYVRLDPVQIRRFKRVV 505 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 + A ++ L + + + + E + Sbjct: 506 RKQ--------------FPAAKSSNSLAQALRSDIDDSSPPGLATISRMLHAAAEVGSVD 551 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 L D L D E+ A Sbjct: 552 PH---------EALWGIWEAAG-----------IADKWQTEVLKDPESVANAH--LDSVL 589 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQR--LDQERISQRFLAGPVNICTLMPMRSIPFKVV 675 + +A++ +Q V + T + + +V Sbjct: 590 RLFTLAEKISDRGGFTARSFAGIVAEQDIAQDSLAAQAGTDDLVQVGTPSSLAHLRVPLV 649 Query: 676 CLLGMNDGVYPRQLAPLGFDLMSQ----------------KPKRGDRSRRDDDRYLFLEA 719 + +N+GV+P G + R+ ++ LF A Sbjct: 650 IIAEVNEGVWPNPKIRGGILGLDDLSAVLLTGETVTSDPGYHSHAKRTNLREEGELFYTA 709 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 L A++ + ++ ++E PS L + A+ ++ + Sbjct: 710 LTRAEEHVIVT-----AISDAESNPSPFFDVLAAGTAKGTQDADGYAITHEDELLPLSLA 764 Query: 780 L---------------TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 + T + Q S + + + Sbjct: 765 EMAAHARARLLRAAADSEQETAAEDVEEWAQLMAALSATSSTVDPPERWRETEDITSAQP 824 Query: 825 PFTLPE--TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 + + V ++ F +R F + S I Sbjct: 825 LYGAEDLVKVSPSQVESFTDCSLRWFLTRNGGDRPGSL-------------AQSLGTIIH 871 Query: 883 QLLNALVEQD--DAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQS 940 + D + + +L + + Sbjct: 872 AAAENYPQGPASAIREFVDEEFKTLDFDAEWERDREHVLAMKMADRLGEYIKDSPGEPIG 931 Query: 941 ME-------IDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGN 993 +E +D ++TG L +++ R + E + G Sbjct: 932 VEAQVYATGVDENGQEWKVTGRLDRIERTPEG-IRIVDFKTGKNTPTGQEMPRHAQLGVY 990 Query: 994 GESRLFLRKDGEWRFPPLAAEQALHYLSQLI 1024 E+ G A Y ++L+ Sbjct: 991 QEAI----NSGSITIGDDQVVDAKAYGAELV 1017 >UniRef50_Q38X69 ATP-dependent helicase/nuclease subunit A n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=ADDA_LACSS Length = 890 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 59/625 (9%), Positives = 154/625 (24%), Gaps = 117/625 (18%) Query: 122 RKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQ 181 + Q + + + + ++Y P + + WQA W+ + Sbjct: 240 LEALQEAEQLSKTSENLMIYAPQIATTQAALTQINADAKTLNWQA--WRQQLTDAQLGPA 297 Query: 182 PRWHRANLYQR-----FIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEI 236 R + ++ L+ L F+ + + QA Q + K + + Sbjct: 298 KRTKKLEPDEQINKDRLKADLDDVKKKIQTLLDTYFVFDEATTANIQRQAGQLVQKLVSV 357 Query: 237 HLLFTNPCRYYWGD------------------IKDPAYLAKLLTRQRRHSFEDRELPLFR 278 L F + ++D A + ++ + Sbjct: 358 TLTFREAFQAEKERRHLLDFSDLEQLCLTILSVEDSPARAFYQQKFSEVLVDEYQDTNPL 417 Query: 279 DSENAGQL--FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 ++ + VG+ + + D + + D+ Sbjct: 418 QETIIQKVTSDHPRNLFMVGDVKQSIYAFRLADPSLFKNKYNEF----GVTEAERDSERI 473 Query: 337 NIQSDILELENRAVAGVNIEEFSRSDNK-----------------RPLDPLDSSITFHVC 379 + + N I + +N P + + Sbjct: 474 ILAENFRSRRNIDDFTNLIFKQLMDENLGELDYDENAALQYGARYYPDQHPTAPTELLLY 533 Query: 380 HSPQREVEV-------------LHDRLLAM-----------LEEDPTLTPRDIIVMVADI 415 + E + R+ AM LE+ + RDI+++ Sbjct: 534 ETKPEEAVANPQLDKSEGQVVAVAKRIQAMMTNGEQIWDKKLEKMRPIEYRDIVLLAPTR 593 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 + + LP I D + ++ ++LL + D+ ++++L Sbjct: 594 GNNLFIL-----DYFKRFGLPVVIKDAQNYFQTTEVQIMLALLQVIDNPNQDIPLVSVLR 648 Query: 476 VPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 P++ +N L + + + Y Sbjct: 649 SPIVGLN--------------------------ENELALIRINDKTDDYYQAVFNFIDQY 682 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 + L +++ L + L +R Q+ ++ + ++ Sbjct: 683 NEQK-------------VGHLGQQVMQKLTHFMALLTSFRTIARQQPIVDLIWTIYQETG 729 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR-F 654 ++ + + L ++ Sbjct: 730 FLDYVGGMPAGRQRQANLHALYERATAYEENGFKGLFQFIQFIERLQKQDKDLAQPTSLE 789 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLG 679 +++ T+ + + F VV L+ Sbjct: 790 NQDAISVMTIHGSKGLEFPVVFLID 814 >UniRef50_Q4PDX2 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PDX2_USTMA Length = 1176 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 66/665 (9%), Positives = 182/665 (27%), Gaps = 124/665 (18%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILV--QSTGMAQWLQMTLSQKFG--IAANIDF 62 S + VL + + + + + PE ILV + A ++M L + G N+ Sbjct: 70 SGKTRVLTSRVA-WLILDP-ANKLRPEDILVVTFTNKAANEMKMRLVKLIGKERVDNLVI 127 Query: 63 PLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKR 122 S + I + F+ + + +L+ L + Sbjct: 128 GTFHSVCARYLRKYGRLISLSNNFSI-------------IDSEDAKRMLKSILKELK--- 171 Query: 123 KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQP 182 A+L + L +P+ + + + ++ L E Sbjct: 172 ---------AELEKENLELKPE-----QAMSEISKAKAKEID-PVRYRQLAEQEAAKSAS 216 Query: 183 RWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTN 242 R +A + ++F + + + + ++I Q + A + L++ Sbjct: 217 R--KAPIGKQF-----TGSASFKQVMATIYIM-------YQKQLVDANALDFDDLLVYG- 261 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLA 301 ++ +++ R ++ + E + S VG+P + Sbjct: 262 --------VQLFRRQNQVVRNIRHVLVDEFQDTNITQYELMRLVATASQAVSIVGDPDQS 313 Query: 302 SWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF--- 358 +G + L D ++ + + + + Sbjct: 314 IYGWRSAEIGNL----------DKMTREFKGTQQARLEENYRSTGAILELALRVVQQDTS 363 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL-TPRDIIVMVADIDS 417 + P + S Q E + + ++ + D ++++ Sbjct: 364 RVDKDLYTSHPRGLPVVLKSHASAQLEAAYIASEIKRLVAHYGGVLDYNDFVILLR---- 419 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 ++ + R + + ++ ++ L+L D+ + + +++VP Sbjct: 420 -FNYLSRAIEAELQSRGIDSKMMGGHKFFDRMEVKDLLAYLALADNPGFTPAFIRVVNVP 478 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 R D L + + + R++ G Sbjct: 479 ------------------------KRGIGDKGVTDLLTMAKAESCSPMELVERVVRGGKN 514 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 G+ + L L+ + R+ P+ + L + + ++ Sbjct: 515 P----------------GIKPAMKRGLEHLVEAVLAVRQAARNGTPVAQLLQLLIEKIDY 558 Query: 598 --FFLPDAETEAAMTLIEQQWQA--IIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 + + EA +++ I+A+ ++ + + + Sbjct: 559 ESYLQAQLDYEARWGNVQELISFSIIVAQNTAYADTPSLSIDQIISHTLSNQQDTDTGRD 618 Query: 654 FLAGP 658 Sbjct: 619 AQDDS 623 Score = 80.0 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 18/126 (14%) Query: 628 YGDAVPLSLLRDELAQRLDQERISQRFLAGP---VNICTLMPMRSIPFKVVCLLGMNDGV 684 G PL + D S+ V I T + + + VV + + +G Sbjct: 755 AGPKTPLRTFLEASILATDMGTESEEKDGKKKPKVTISTCHAAKGLEWPVVFIPAIEEGC 814 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQ--DNSER 742 +P ++R L A+ A+ LY+++ +Q + ++ Sbjct: 815 FPSFRCE-------------KPDEIAEERRLLYVAMTRAESMLYLTHASYRMQGGEGKDK 861 Query: 743 FPSVLV 748 S V Sbjct: 862 VLSTFV 867 >UniRef50_B9ZA08 UvrD/REP helicase n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZA08_NATMA Length = 1194 Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats. Identities = 86/912 (9%), Positives = 196/912 (21%), Gaps = 167/912 (18%) Query: 145 WLAQWETGHLVEGLGEAQAWQAPLWKA--LVEYTHQLGQPRWHRANLYQRFIETLESATT 202 E WQA L ++ L A Sbjct: 275 MAETAENMADHLRTESELEWQAFRLPEAMFEGERGPLTSITQTPMGRLSNYVHMLRRAR- 333 Query: 203 CPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLT 262 YL+AL L+ ++D +L Sbjct: 334 ------------AFVGAYEAYLEALDERNAFDYDELIHRTV-----DLLRDERVRDDILA 376 Query: 263 RQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE 322 ++ + E +L + VG+ A G+D + ES +E Sbjct: 377 EWDAVYCDEFQDTDESQLELVEELRDGLDIMVVGDSDQAIHEWRGQDPENMSKLPESFEE 436 Query: 323 LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSP 382 + +L + IL+L + E + +P S+ Sbjct: 437 IGL-------DLNFRSRQPILDLATNLDPDKDEIEAYK-------EPNPPSVVTVDSEGE 482 Query: 383 QREVEVLHDRLLAML----EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 + + + + +L E+ P DI V+V + +PY Sbjct: 483 RTPAQ-VSTTISHLLTGRFEDVPERELEDIAVLVRRNQNARDIASQ-----LDRDSIPYT 536 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 +S + + + +S + +L Sbjct: 537 LSSDASGELGHGVRTVLSYFRVLVEPGDDVSWQRVLLHLY-------------------- 576 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 +P T + GY ++ Sbjct: 577 ----------------RVPEGDVDTLLRAGETVPAGY---------DALAEPAAELRCPD 611 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQA 618 + L R ++ + E + + A+ +E+ +A Sbjct: 612 RVHEALTD-----YKTLRSVSDTHAISELYRHFKRETRIDWFLREHDRDALANVERLIEA 666 Query: 619 IIAEGLGAQYGDAV--PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 + ++ A L L+ + A V++ T+ + + F V Sbjct: 667 FNDSPVQSELTPAFVDYLERQAHLLSADDETATSPGSQSADAVDVMTIHQAKGLDFDTVL 726 Query: 677 LLGMNDGVYPRQL--------APLGFDLMSQKPKRGDR-------SRRDDDRYLFLEALI 721 L + + + + + + D + ++ + AL Sbjct: 727 LPFLTESEFGHITLANYQRDLYRYDILVDDVQGELADPLRADCSDDQIAEEWRVLHVALT 786 Query: 722 SAQQKLYIS-------YIGRSIQDNS-ERFPS-----------VL-----VQELIDYIGQ 757 A++ L++ G + D+ S + + D I Sbjct: 787 RAKEHLFLFGNDVEEQGPGADMLDDHLPSERSETPIHWSAEGPRFSVWNALMDSYDEIAA 846 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAH 817 + + + + + + A A Sbjct: 847 DTPDAVRDYTDAVNRGVDEDPGTITYYQTEVSTDEALETVLEFADEVVAGTLADGDSAAS 906 Query: 818 SEFVQPLPF--------TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 + L L+ + + D Sbjct: 907 PNTARFADAPLGTSVDVELARQHSHTALESVRNCERKHVLDHVVDAFP---DPTPATGGE 963 Query: 870 FILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 + + + + A + E + + + + Sbjct: 964 AEVTQADVGSLFHDVAELAY-WRGYDSKTEWREACEWVARSRDLTTALEPALECIDRYFE 1022 Query: 930 R-VIACRQPGQSMEIDLACNGVQ-------------------ITGWLPQVQPDGLLRWRP 969 V G + I + + + I G++ V+ Sbjct: 1023 TDVPEWPAVGAEVPIAVDGDEIAEVNGDIAAVDDGIAAIEGDIIGYVDSVRRHPDGGLVV 1082 Query: 970 SLLSVAQGMQLW 981 +Q + Sbjct: 1083 LDYKTSQAQKDL 1094 >UniRef50_B6JCP8 Double-strand break repair protein AddB n=15 Tax=Bradyrhizobiaceae RepID=B6JCP8_OLICO Length = 1066 Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats. Identities = 100/933 (10%), Positives = 222/933 (23%), Gaps = 125/933 (13%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPL-WKALVEYTHQLGQPRWH 185 L+ A L D D W + + Q W+ L + + Sbjct: 152 LADDLARLIDDMTTRGVD----WHALNTLVPDDLDQYWKITLDFLKIASEAWPAHLRESE 207 Query: 186 RANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCR 245 R + + P G + P + L A+ +H + ++ Sbjct: 208 LIEPVARRDLLIAAEAARMAAAPGPFIAAGSTGSMPSTAKFLHAVAQHPQGAVVLPG--- 264 Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGK 305 D+ D A+ A R F + L L V Sbjct: 265 -LDTDLDDEAWRAIGGVRDSTGRFAEHPLSSHPQY----ALHGLLDVFGV---------- 309 Query: 306 LGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKR 365 + L ++ + + D Sbjct: 310 ------------DRKAVRALAEPSAHGRELIASEA----MRPARETAQWHHRLADPDVTT 353 Query: 366 PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV 425 ++ ++ +P+ E + + + T ++ D + Sbjct: 354 RIEAGFDNLAIVEAANPEMEALAIATAMREARQFGKTT-----ALVTPDRA-----LARR 403 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 +A LPY S + P S +LALL P+L Sbjct: 404 VMAALGRWQLPYDDSGGDSLMDTPAGIFARLAAETVTSELAPPTLLALLKHPLLRLGAPA 463 Query: 486 T-EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 + G R ++ + + L + A+ Sbjct: 464 GGWTKATANLELAVLRGTRPAPGCKGLQAAFAAFVEEWSKTQRKELSTLHPSEPRARLTP 523 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL-AQERPLEEWLPVCRDMLNAFFLPDA 603 + + + + L S++ + + + ++ AF D Sbjct: 524 DDIESATRALDALVSALAPLESVVRGTHDFATLAQRHYETITHLSRDNDGLIAAFAGTD- 582 Query: 604 ETEAAMTLIEQQWQAII---AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP-V 659 + + + + A A+ + D A + + + + Sbjct: 583 -----GQQLASAFNELAPPNENDVPAPTHIALEAADYPDLFATAFANRVVRRPENSDAAL 637 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD--RSRRDDDRYLFL 717 I L+ R V L G+ +GV+P + + + G RR Sbjct: 638 RIYGLLEARLTQCDRVILGGLVEGVWPPAPRIDPWLSRPMRHELGLDLPERRIGLTAHDF 697 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 L+ A++ + I++ + + S + + G + ++ Sbjct: 698 AQLLGAKE-VIITHATK--VGGAPAVASRFLHRMKAIAGTKAWTEAEKR----------- 743 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETL 837 G E L A P P + + + Sbjct: 744 -------------------GADYVRYAEALDAPDSITPVAQPAPTPPVALRPLQMSVTEI 784 Query: 838 QRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD---A 894 + + P F + L++ L R L ++ Sbjct: 785 EDWLRDPYTIFAKRILKLTLLDPVDLP-------LTAADRGSAIHNALGDFTQKHSKTLP 837 Query: 895 ERLFRRFRAAGD------LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN 948 E + R G+ + + ++W + A + R + + Sbjct: 838 EDIVAELRFCGEEHFAALMAHPEARALWWPRFLRIADWFAGWELRRRAETVEIAAEQRGE 897 Query: 949 ---------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLF 999 +++ +++ + Q L Sbjct: 898 IAIPLGDGREFRLSARADRIELRADRTFAIIDYKTGQPPSNKQVQL---GLSPQLTLEAA 954 Query: 1000 LRKDGEWRFPPLAAEQALHYLSQLIEGYREGMS 1032 + + G +R + A +S+L+ G + Sbjct: 955 ILRGGGFRHAFASLP-ANPSVSELVYVRLSGNN 986 >UniRef50_Q02D21 ATP-dependent nuclease subunit B-like protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02D21_SOLUE Length = 987 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 97/818 (11%), Positives = 193/818 (23%), Gaps = 138/818 (16%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 A + +++ + S + P+ D ++ E + R+ A + Sbjct: 214 AEPATSLESLQRYLFSTDAVPVRDEDGTVEIFSTSGEALECVEIARRIGA-----RGIGF 268 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRF 465 + +++ + Y P + A +P + R +F++LL + R Sbjct: 269 DECAILLRSPERYQPLVV----EALRRAGIPAHCTRGSRRPDAA-GRSFLALLHCAEERL 323 Query: 466 VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWR 525 + L Q R + + G W Sbjct: 324 SASR-----------------FAEYLSLGQMPESEEPRTPAAWERLLVDAAVIGGAARWE 366 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLE 585 L + + A + + L + M + L + Sbjct: 367 TRLRGLREDFERRYAAA---EEEEERARWRQRIDRLEALRAFAMPVIERLAALPERANWG 423 Query: 586 EWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL 645 EW+ L F L D + + + I V L + L R Sbjct: 424 EWIETLTA-LAEFTLNDPTRVLELLEELEPMREI----------GPVGLGEVLLVLGPRF 472 Query: 646 DQER-ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 Q + G V + + R + F+ V + G+N+G++PR A L Q+ G Sbjct: 473 QQLSSAPEGARYGKVWVGGIEEARGMAFRAVYVPGVNEGLFPRPPAEDPLLLERQREALG 532 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD 764 + R +D L A A + +SY + R PS G S + Sbjct: 533 -IALRAEDTELLGIAAACATEHFALSYSRLDLLTGRVRVPSFYAFAAHRAAGGSEIDVHE 591 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQ--------------------------PGE 798 + + D + Sbjct: 592 FEKRARSATGTRIGWPAPENAADAIDDAEFDLATLAPLTKGSGQYLKSLPGRAVESLRAR 651 Query: 799 RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFR 858 + W A + TLQ++ P R + L + Sbjct: 652 WMRWHAPWKAADGLVVDEIGDDALKRYRLGARAWSPSTLQQYARCPYRFALRGILGLRAV 711 Query: 859 TEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD----------------------AER 896 T ++ R ++ ++ L+ E Sbjct: 712 ENP-----TGIQRMDPAQRGELFHRVQFELLRDLASRELLPVSPATLAGALDRLDAVLED 766 Query: 897 LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLAC--------- 947 + + A + +++ +L+ Sbjct: 767 VAAKAEAELAPAIPQIWRGEVQAIRADLRGWLQEKALRDADWTPQFYELSFGLKDPAGRD 826 Query: 948 -----------NGVQITGWLPQVQPDGLLRWRPSLLSVAQGM-------------QLWLE 983 G ++ G + V+ R + Q L Sbjct: 827 PRSRKDAVEVEGGYRLQGSIDLVERHPSGVLRVVDHKTGRVPEPKPDTVGGGEALQPLLY 886 Query: 984 HLVYCASGGNGE---SRLFLRKDGEWRFPPLAAEQA-LHYLSQLIEGYREGMSA-PLLVL 1038 L A G + +R + + ++E M L Sbjct: 887 ALAAEAIVGEPVSSGRLYYATIAQNYRTIDVPLNDWTRRRMQHVLEIIDGAMRDGFLPAA 946 Query: 1039 PE----SGGAWLKTCYDAQNDAMLDDDSTLQKARTKFL 1072 P G +L C + + + K + Sbjct: 947 PRKDGCKGCDYLPVCGPYEEERVRVKSQAELKTLKELR 984 >UniRef50_B5CL82 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B5CL82_9FIRM Length = 758 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 73/573 (12%), Positives = 159/573 (27%), Gaps = 89/573 (15%) Query: 267 HSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLG--RDYIYLLSDLESSQEL 323 ++ + E L VG+P + G + +LL ++E Sbjct: 218 IIVDEVQDSDKMQMEFLEALKGRETKLFAVGDPNQVIYSWRGTGENMFFLLKHRFEAKEY 277 Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQ 383 V+ + L+ + L+ R I + P Sbjct: 278 SLPVNYRSNALILGAANHFLQF---------------GSQIRASREKGEKIKIVNYYDPF 322 Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 +E E L R+ + ++ LT R++ V + + VF + +PY +S ++ Sbjct: 323 QEAEELELRIREL--KEQGLTYREMAVFYR-LQRQVDVLAKVFE----RQGIPYEVSVKK 375 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 + PVL F+ +L + + +A + + + Sbjct: 376 SLHDIPVLNWFVRVLRFCVNPLDEQSGIAAV---------------ADKEFGEFGMTRKK 420 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 + E Q T G M+ + E Q + Y + V Sbjct: 421 AEKIIKEKKLSESLLYEQMTGFQAWVVDNFGKFMKEGEKE-QKIFEYFHLKEFLRPTVES 479 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 + ++ + + L ++ R+ LN+ + + E Sbjct: 480 YTENVKKIKSFLKQLCSYCGSIDFRGHLREFLNS----------------SELYGLKMEA 523 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 + G + V + TL + + F V L+G+N G Sbjct: 524 GEKEVGAEMNPED------------------RKDAVQLMTLHASKGLEFDTVFLIGVNPG 565 Query: 684 VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERF 743 + P + +++R LF + A+ +L +S+ + Sbjct: 566 LIPLHSKNY--------------EQEEEERRLFFVGITRAKNRLELSWYTNPGEPGIAGE 611 Query: 744 PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYA 803 S ++ + + + + N + + V+ + + E+ Sbjct: 612 ESRYLKMIPQELLEGMPDEKERWANLQQLKKEVQEKAQEKVQEKAQEKAQEKVQEKAQEK 671 Query: 804 REWLPAASQAGKAHSEFVQPLPFTLPETVPLET 836 + K E L + E Sbjct: 672 VQEKAQKEVQEKEQKELRTELRQEVKLEDQQEQ 704 >UniRef50_A9KTE6 ATP-dependent helicase/nuclease subunit A n=1 Tax=Clostridium phytofermentans ISDg RepID=ADDA_CLOPH Length = 1377 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 55/583 (9%), Positives = 133/583 (22%), Gaps = 101/583 (17%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG----EQDVGNPLLASWG 304 G++ ++ + ++ + + + VG+ + + Sbjct: 384 GNLVPTKVATEMSEQFVEIMIDEYQDSNYVQEYILSSISKVTRGCPNVFMVGDVKQSIYK 443 Query: 305 KLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV----------- 353 + E + + ++++L+ N + Sbjct: 444 FRMARPELFMEKYEQYSTEEGLYRRIDLSKNFRSRAEVLDSINGVFEKIMTKAMGGIEYT 503 Query: 354 ------------------------------NIEEFSRSDNKRPLDPLDSSITF------- 376 + + + + + Sbjct: 504 KEVSLYPGAQFPEIGMDLDNTSFLFSDTKTELIILDLKEEEASIPDSMDRLDVMALEEDA 563 Query: 377 HVCHSPQREVEVLHDRLLAMLEEDPT---------------LTPRDIIVMVADIDSYSPF 421 + E + + R+ ++ + RDI++++ + + Sbjct: 564 IELSKRELEAKAVAMRIKQLVHGERGFSVTKRNGEEQDLKRCQYRDIVILLRTMSGW--- 620 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 F +P + ++ ++ L + D+ + A+L P++ Sbjct: 621 -SETFTEILKQEGIPAYSDTQTGYFQTLEVKTVLNYLRILDNPRQDAPLTAILYSPIVGL 679 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNV--RELELPATGQHTWRFGLTRMLLGYAMES 539 + E L +LR + + I D L + T + Sbjct: 680 ----SAEQLSFLRVKPGKGAEKLSIYDAARECALNYLEIQDEVTQPEETQPVYDSIIQAD 735 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 E S + E L + R E L ++ F Sbjct: 736 LMYEKSSAEKTVSMDKNLIETGEKLKRFFATYDKLREKAIYLPVHEIILEFFKETGYDLF 795 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA--QRLDQERISQRFLAG 657 + + Y + L + E Sbjct: 796 VYAMPGGEQRRNNLNLLVQHALSFEESSYHGLFQFIRYIERLLKFEIDYGEAGGLSENDN 855 Query: 658 PVNICTLMPMRSIPFKVVCLLGMND-----------------GVYP-----RQLAPLGFD 695 V I ++ + + F VV L GM G+ P + Sbjct: 856 AVRIMSIHKSKGLEFPVVILAGMGKQFNTMDAREKIVLHADYGIGPECIDYQLRTKCPTL 915 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 L K ++ + AL A++KL + D Sbjct: 916 LKQVIKKNIVLDNLGEELRVLYVALTRAKEKLIMIGSANDAND 958 >UniRef50_A6WX35 Double-strand break repair helicase AddA n=11 Tax=Brucellaceae RepID=A6WX35_OCHA4 Length = 1180 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 106/929 (11%), Positives = 213/929 (22%), Gaps = 188/929 (20%) Query: 187 ANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRY 246 A ++ ++ L+ L + I L Y + G L+ Sbjct: 329 AARVEQGLDRLKELRLVRLNLAALTLID---NLLQRYHDLKRQRGLLDFEDLITRTVAL- 384 Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-----------DGEQDV 295 + KL ++ + + L V Sbjct: 385 LARNGAGQWVQYKLDRGIDHILVDEAQDTSPDQWQVIRMLSEEFFSGVGQRNISRTLFAV 444 Query: 296 GNPLLASWGKLGRDYIYLLSDLE----SSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 G+ + + G + +++ + + N D+L+ + A Sbjct: 445 GDEKQSIYSFQGAVPEDFAAQGRSVSLRAEDAELKFERVSLNFSFRSAPDVLQAVDEVFA 504 Query: 352 GVNIEEFSRSDNKRPL--DPLDSSITFHVCHSPQ--RE------------------VEVL 389 + +P+ E + + Sbjct: 505 RPEANRGLAGATVHEAIRSDAPGEVEIWDMLTPEVVEEPDDWREPVDHLAAPAVRLADQI 564 Query: 390 HDRLLAMLEEDPTLT-------PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR 442 + L+ + PRDI+V+V D + P + A + +P A +DR Sbjct: 565 AATIRHWLDRGEPIPGQNRRIMPRDIMVLVRKRDQFMPALSR----ALKNLSVPVAGADR 620 Query: 443 RARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGI 502 SH ++ ++L + ++L P+ Sbjct: 621 LRLTSHIAIQDLMALGRFVLQPSDDLSLASVLKSPLF----------------------- 657 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVG 562 G DDD + EL P T L ++ G A Sbjct: 658 --GWDDDRLFELAHPRGSGLTLFERLYQVSRGDA-------------------------- 689 Query: 563 HLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAE 622 LA + L+ WR E + + L A Sbjct: 690 ALAEVHKTLSRWRNMADTMPVFEFYARILSADGARRKLLARLGPEAG----DIIDEFQNY 745 Query: 623 GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND 682 L A+ L + L + + V I T+ + + VV L+ Sbjct: 746 ALSAERAGLPGLQAYLETLEAASPEIKRELDQGRNEVRIMTVHAAKGLEGAVVFLVDPGS 805 Query: 683 GVYPRQLAPL--GFDLMSQ----------------------KPKRGDRSRRDDDRYLFLE 718 V+ AP FD + + ++ ++ R L Sbjct: 806 AVWTGSRAPKLIPFDFSNDSPSVKGYLWQPNAGYQTGFTTAQIEKLKTRAEEEYRRLLYV 865 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 + A+ +L I + + + + + ++ A + Sbjct: 866 GMTRAEDRLIICGYRGTRESGET---------WHRLVEDALATKAETFVHPVLKVAARRY 916 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQ 838 T + + S+ E+ L Sbjct: 917 RNTPRGMVDIAEQDRTEDHALPSFPDEYREPIKPEIGLPRPLAPS---------GASALI 967 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE-GLSRYQINQQLLNALVEQDDAERL 897 P S + L R LL L + R Sbjct: 968 EADEEP------------PLDSFSPVLGPGNGTPAFALRRGTAIHMLLQYLPDVPQDGRE 1015 Query: 898 FRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD--------RVIACRQPGQSMEIDLACNG 949 G + E + Q ++ + D + + I+L Sbjct: 1016 TLARDYLGRIAADWP-ETERQIAWQSVRTILDDPTYAPVFAEGSRGEVAIMGTIELGGRD 1074 Query: 950 VQITGWLPQVQPDGLLRWRPSLLSVAQ--------GMQLWLEHLVYCASGGNGE------ 995 ++G + ++ R + + L Sbjct: 1075 HAVSGQIDRISVGED-RVLIIDYKTNRPPPKTIEAVPFAYRAQLALYRELLAPLYPGRIV 1133 Query: 996 SRLFLRKDGEW--RFPPLAAEQALHYLSQ 1022 L +G + P + ++AL L Sbjct: 1134 ETALLFTEGPFLMPLPDVVLDEALQSLKD 1162 >UniRef50_C6AB51 Double-strand break repair helicase AddA n=5 Tax=Bartonella RepID=C6AB51_BARGA Length = 1158 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 109/983 (11%), Positives = 241/983 (24%), Gaps = 192/983 (19%) Query: 144 DWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIET-LESATT 202 D + + V + ++ + + +++ FI+ LE Sbjct: 261 DMVEKLSQLEKVHDETNILNIISDIYFTIKGEPRKFSHLSRKKSDQIWPFIQQMLEDKQN 320 Query: 203 CPPGLPSRVFICGISALP-------PVYLQALQALGKHIEIHLLFTNPCR--YYWGDIKD 253 L + ++ L VYL+ L K R + Sbjct: 321 KLSILLEKYQCAKVATLNMAAFQLCAVYLKIYTNLKKANGFLDFDDLIERTLHLLQRKGA 380 Query: 254 PAYLAKLLTR-QRRHSFEDRELPLFRDSENAGQLFNS-----------DGEQDVGNPLLA 301 ++ L R ++ + + L VG+ + Sbjct: 381 SQWVHYKLDRGLDHILLDEAQDTNPEQWQIIQLLAQEFFSGYSQRTNIRTLFAVGDEKQS 440 Query: 302 SWGKLGRDYIYL-----LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE 356 + G + + Q F + +D+L+ + Sbjct: 441 IYSFQGAAPENFAENGRIIQKKVQQTNQQFEKIQLHYS-FRSTADVLKSVDIVFETPENY 499 Query: 357 EFSRSDNKRPLDP-----LDSSITFHVCHSPQ--------------------REVEVLHD 391 + ++N + + + S + R E + + Sbjct: 500 KGLSAENTKTVHEAIRVHSPGEVVIWDAISQETSEFPHDWHLSVDHLDTPEVRLAEKIAE 559 Query: 392 RLLAMLEEDPTL-------TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 + L++ L DI+++V D + + F R +P A +DR Sbjct: 560 TIANWLQKGEMLPAKGRLIRASDIMILVRKRDQFVSALSRAF----KHRNIPVAGADRLQ 615 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 H + ++L + +L P+ A +EE L L + R Sbjct: 616 LTKHISIRDLMALARFVLQPQDDLSLACVLKSPLFAL----SEEELYQL------AAHRT 665 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 G + L A+ Q +++ ++ A+ + Sbjct: 666 GSLW---QSLFTHASSQASFKDAFEKLNHYRALVDKIPVF-------------------- 702 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 +LN + A + L Sbjct: 703 ------------------------EFYNHILNNDKGRQKILSRLGSEANDVLDAFMDYTL 738 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 Q L + L+ + + + I T+ + + +V L+ + Sbjct: 739 TIQKTGLPGLQAFLETLSASEPEIKREFEQNNEEIRIMTVHAAKGLEAAIVFLVDPGSAI 798 Query: 685 Y-----PR------------------QLAPLGFD--LMSQKPKRGDRSRRDDDRYLFLEA 719 + P FD L Q ++ R L Sbjct: 799 WHPQHAPHLLKVPLNNAKWNGKQAFIWRPNEKFDTKLSKQAISHLKERAEEEYRRLLYVG 858 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 + A+ +L+I + +Q + + AL +S + A Sbjct: 859 MTRAEDRLFIC-----GYKGQKTQSHTWLQLVKKAL-------EPHALAIKDSVEDIAAW 906 Query: 780 LTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQR 839 C+ P LPA + ++ +E Sbjct: 907 RFCITPPSSVSINPKVPCAECQTLPP-LPAFFSHKVPEEPVLPKPLKPSVASLSIEADTE 965 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFR 899 + P + L + I +LL L + ++ Sbjct: 966 LSSSPKQLTISPVLGATNTNRAF-----------SIEYGNIVHRLLQYLPD-YPLQKRRD 1013 Query: 900 RFRAAGDLPYGAFGEIFWETQCQEMQQLADR--VIACRQPGQSMEIDL------ACNGVQ 951 R ++ + E E + + ++ D + E+ L Sbjct: 1014 YARNYLNIKASHWYESQREDALRHVWKILDHVYLKPLFSEHSRAEVSLMGIVKIRGKEHA 1073 Query: 952 ITGWLPQVQPDGLLRWRPSLLSVA------------QGMQLWLEHLVYCASGGNGESRLF 999 I+G + ++ + +Q+ L + A + + + Sbjct: 1074 ISGQIDRLYITQN-SIIFADFKTGTPPENEAAIASHHWLQMALYRKLLQAIHPDKDIQAL 1132 Query: 1000 LRKDGEWRFPPLAAEQALHYLSQ 1022 L E + L+ E+ +L + Sbjct: 1133 LIYSKEAKIFKLSPEKLEAFLGE 1155 >UniRef50_B1MZM2 ATP-dependent helicase/nuclease subunit A n=3 Tax=Leuconostoc RepID=ADDA_LEUCK Length = 1236 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 48/544 (8%), Positives = 132/544 (24%), Gaps = 123/544 (22%) Query: 263 RQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD---YIYLLSDLE- 318 + + ++ + ++ N VG+ + +G + + Sbjct: 398 QFQEILVDEYQDINQLQETLLTKVSNGHNMYMVGDVKQSIYGFRQAEPTLFARKYRQFAL 457 Query: 319 ---SSQELDAFVDVTPDNLLHNIQSDIL---------ELENRAVAGVNIEEFS------- 359 ++ + N + + + I ++ A + + Sbjct: 458 PDNPDSRIELADNFRSQNNVTRVTNLIFTQLMDEKLGDIAYTGEAKLVPKANYPTDVTPV 517 Query: 360 ------RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEED-----------PT 402 + N + D S Q + L +++L++ + Sbjct: 518 FNMTIIKQPNVTTSEDEDES---QEFEKRQAQYAQLANQILSLRDTTIFDRKAEPAGMRP 574 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 + DI ++ Y + +P + + + +L + D Sbjct: 575 VQYGDIAILTRSKTGYIDLVAT-----LRQAGIPTQVDSVGNYFQTMEVYLMLDVLRVID 629 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + + A+L P+ G ++++ + L Sbjct: 630 NPHQDIPLAAILRSPMF-------------------------GYSENDLAAVRLADKKHD 664 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 W + A+ +++ + W + Q Sbjct: 665 YWSAL---------------------------TVFAQADQRSQTVIDLIKKWHQLAIQND 697 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 + + D ++ A + ++L Sbjct: 698 LVALIWAIFDDTSWLDYVAGMPGGAQRQANLHALYDYARTYQENTHAGLFRFIRYIEQLQ 757 Query: 643 QRLDQE-RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN-------------------- 681 + Q Q V I T+ + + F +V L + Sbjct: 758 ENDGQLGEAPQEANEQAVRIMTIHASKGLEFPIVFLPEFDKSFNTQDLSGKMLIQKNAGI 817 Query: 682 --DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 + + P L + + R ++ L AL A+Q++Y+ + ++ Sbjct: 818 GLEYLQPEALVAMPTLKKLTVQQALKRQSWSEEMRLLYVALTRAEQQIYVVGTVKLDENE 877 Query: 740 SERF 743 + Sbjct: 878 ENQR 881 >UniRef50_C0QS88 Putative uncharacterized protein n=1 Tax=Persephonella marina EX-H1 RepID=C0QS88_PERMH Length = 921 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 109/857 (12%), Positives = 240/857 (28%), Gaps = 123/857 (14%) Query: 170 KALVEYTHQLGQPRWHRANLYQRF-IETLESATTCPPGLPSRVFICGISALPPVYLQALQ 228 + ++ + A + + I + L + I I ++ ++ Sbjct: 40 RRAIKEYLSDSLGLLYNAEFFTKLDIARELTGKEPINNLEKEILIDSILKEKDIH---IE 96 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 L + + + D+ + L ++ +R + ++ + Sbjct: 97 GLSRAYSETIQKLKESKIEPQDLPEGERLKEVYEEYQRKLADLN-------LKDREDIIT 149 Query: 289 SDGEQDVGNPLLASWGKLG-----RDYIYLLSDLESSQELD------AFVDVTPDNLLHN 337 +D L +G RD L SS + F Sbjct: 150 EASLKDYKTDFLFVFGFHSLTEIDRDMFRSLLKNRSSVYIPINPGYSVFEKNPYLRSTFE 209 Query: 338 IQSDIL---ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 + E+ + S +I F V + E+ + +L Sbjct: 210 FFKNFRLKTYTESIKKEDQKLTSLMFSSAITEEGIGCKNIKFIVSKGKRDEIVKIAKSIL 269 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAF 454 + I V++ D+ SY I++VF +PY +S+ + Sbjct: 270 KI---KENTRWYKIGVVINDLGSYLKDIKSVFQEY----NIPYYLSEENRFIDQLPFKKM 322 Query: 455 ISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVREL 514 L SL ++ F D+L + +L IDD ++ Sbjct: 323 FLLFSLKENNFSKIDLLNSISKEILN-------------------------IDDIDISSF 357 Query: 515 ELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIW 574 E +++ G ++ + + G L Sbjct: 358 EKDLIE-NSYEEGYESIIKLLSDKGYNGIID-------------------------LLRS 391 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 + + + L + + D++ FF + + I + + + Sbjct: 392 IKKIPERGSLNDLIQNYTDIIERFFKKN----EHTEKFLNILENIQLNHVLKKLYPEITY 447 Query: 635 SLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 S L L++E I +R V I T I F + + MN+G YP + Sbjct: 448 SEFNSILLHYLEEEDIDRRLKGDIVQIRTPNISEGIIFDYLFFVDMNEGKYPSIIKDDPV 507 Query: 695 DLMSQK---PKRGDRSRRDDDRYLF--LEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 + + ++G ++ ++ + +YISY R + ++ PSVLV+ Sbjct: 508 INNTLRVKLEEKGLPKLNASYWQQIITFISIFNSSKNIYISYKNRDDK-GNDLSPSVLVE 566 Query: 750 ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 EL+ Y + L ++ E L + N ++ Sbjct: 567 ELLRLNYGRSYFENGDTLKLEDPEE--ITTLKEFRLKNAAHLINTDNLLKKVVEAHIKRE 624 Query: 810 ASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 + + + + LQ F P R F + + EI DTE Sbjct: 625 SEYITEYEGYVNVNPKYI---KLTPSKLQTFSDCPYRFFLSSVIN----PDTFEIVDTER 677 Query: 870 FILEGLSRYQINQQLLNALVEQDDAER-----------------LFRRFRAAGDLPYGAF 912 + ++L + + ++ L + + + Sbjct: 678 IPPD--KEGTAIHEILEFVYRKRIKDKSRLRMIIPALVKEKFRPLLEELKPSARIFEEKR 735 Query: 913 GEIFWETQCQEMQQLADRVIA-CRQPGQSMEIDLACNGVQITGWLPQVQPD-GLLRWRPS 970 + + + + + +R+ M+ + G + TG + + D ++ Sbjct: 736 VLLLSDILTEFVIKDLERIRNIYIPEVIEMKRSVNIYGFKFTGKIDRADRDLKNGKYIIY 795 Query: 971 LLSVAQGMQLWLEHLVY 987 + L + Sbjct: 796 DYKTGKKRIDDLRKALL 812 >UniRef50_B7AS99 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AS99_9BACE Length = 1022 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 83/988 (8%), Positives = 226/988 (22%), Gaps = 206/988 (20%) Query: 164 WQAPLWKALVEYTHQLGQPRWHR--ANLYQRFIETLESATTCPPGLPSRVFICGISALPP 221 L + + R + + ++ L + L L Sbjct: 90 DMKELVRNSRTKYRDSFRKLRDRLCSMSVEEYLRELSANGAPLRML---------ITLAS 140 Query: 222 VYLQALQALGKHIEIHLLF---TNPCRYYWGDIKDPAYLAKLLT----RQRRHSFEDREL 274 Y+ A+ A K I C D +L ++ + Sbjct: 141 EYMDAVDAAKKEKNIIDFNDIEHMACSLLVKHENDTDEYTQLADDLASYYGEILIDEYQD 200 Query: 275 PLFRDSENA------GQLFNSDGEQDVGNPLLASWGKLGRDYIYLLS------DLESSQE 322 + + VG+ + + L D + + Sbjct: 201 SNMLQEMILTAVSRGRLDSSRNNLFMVGDVKQSIYKFRLARPELFLDKYVKYPDADGCEV 260 Query: 323 LDAFVDVTPDNLLHNIQSDILE----------------LENRAVAGVNIEEFSRSDNKRP 366 ++ + + + + + E N + + DN+ Sbjct: 261 IELRNNFRSRSQVLYSVNSVFEKIMHRECGGIEYTEDVRLNPGLEFAQRTDSGMMDNRTS 320 Query: 367 LDPLDSSITFHV--CHSPQR-EVEVLHDRLLAMLEEDPTLT-------------PRDIIV 410 + D +I + ++P+ E ++ + +++ED + DI+V Sbjct: 321 IRLADLNIQYDEDDVNTPRECEGRLIASIIKEVIDEDTGMPVYDERLGTYRKAEYGDIVV 380 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 + +D ++ VF + +P A +E ++LL++ D+ + Sbjct: 381 LTRSLDGWAD----VFADELMNAGIPAAAQSSSGYYDTYEIEQVLNLLAVIDNPAQDIPL 436 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 A+ +D +++ Sbjct: 437 AAVALS-------------------------YFGTLDVNDLA------------------ 453 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 L+ A A+ + + E+ + +LL + +R E + Sbjct: 454 -LVKSAYPDARLYESMNRYLNSHADNQDEICAKINNLLTMIEGYRTKSVYLTINELIWKI 512 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA--QRLDQE 648 D ++ + Y +++ Q Sbjct: 513 IYDTGFYDYVGMMPAGSMRQQNLDMLCDKAESYARTSYHGLFNFLRYIEKIRKYNLDSQS 572 Query: 649 RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR--------------------- 687 S V I ++ + + F +V + G+ Sbjct: 573 GASDMSDNNAVQIMSIHKSKGLEFPIVIVAGIAKKFNNMDARGRVVVDSDIGVGADIIDT 632 Query: 688 -QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS----------- 735 + + S + ++ + A+ A++KL ++ ++ Sbjct: 633 VMRTKVSTPVKSAVEMKLVDDNLAEEMRILYVAMTRAKEKLIMTGTLKNYDKMCAKWKTT 692 Query: 736 --IQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 + + S + ++ ++ + + Sbjct: 693 DVSTFDGIQGCSSYMDMIMPVACGDAVNFDISVTEINKEPDEDEYNGDKHDIMAHNAADI 752 Query: 794 YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAH--PVRAFFQM 851 ++ ++ + + E V + E + F P Sbjct: 753 HEAAKKGAVSIEPYRYGYAVTMKTKLSVSEIKLHEYEEQ-----EEFTRDVLPELNAANN 807 Query: 852 RLQVNFRTEDSEIPDTEPFIL---------EGLSRYQINQQLLNAL-------------- 888 + + P EP + R +++ L Sbjct: 808 GKSGSESGIEGVQPAYEPCVPQFISKKEDVAPAERGTAFHRVMECLDYNRCGSVDDIRGY 867 Query: 889 VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD------------------R 930 +++ + R +A P + + + + Sbjct: 868 IDELVDRNMMTRRQADAVNPQKVYDFCNSSIGARTAEAFRAGRLYREQPFVMGIPAGSIK 927 Query: 931 VIACRQPGQSMEID-LACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ---------GMQL 980 + ++ L V I G + + + + Sbjct: 928 IYQELADRYNVSYSLLDEETVLIQGVIDMYFEE-NGKVVLVDYKTDRVSGSNAEKILRDH 986 Query: 981 WLEHLVYCASGGNGESRLFLRKDGEWRF 1008 + L + + + + + F Sbjct: 987 YTIQLELYSEALERALGMEVSEKLIYSF 1014 >UniRef50_Q3SWM3 DNA helicase/exodeoxyribonuclease V, subunit A n=15 Tax=Bradyrhizobiaceae RepID=Q3SWM3_NITWN Length = 1202 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 90/871 (10%), Positives = 194/871 (22%), Gaps = 166/871 (19%) Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNS------------DGEQDVGNPLLASWGKL 306 KL ++ + + + ++ VG+ + + Sbjct: 395 KLDRGVDHVLIDEAQDTSPKQWDIVERIIADFTTGEGAREGVRRTVFAVGDEKQSIFSFQ 454 Query: 307 GR--------------------------DYIYLLSDLESSQE--LDAFVDVTPDNLLHNI 338 G D+IY ++ E F D +H + Sbjct: 455 GAAPREFDERRRKLERKFTDAKLPFRKEDFIYSFRSGKTILESVDHVFRDPAIYASIHAV 514 Query: 339 QSDIL--ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQ-REVEVLHDRLLA 395 + + L + A V++ D + ++ + SP+ + + D + + Sbjct: 515 GAHPVHESLADAAPGIVDLWSLEERDKREEMEGWRAPFDAVTATSPEVKLARRIRDEIKS 574 Query: 396 MLEED---------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 ++ + L DI+V+V + + A +P A +DR Sbjct: 575 LIAQGAMTGHLGNRRPLGYGDILVLVRRRGNAFDAVI----QALKQSGIPVAGADRLKLT 630 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 H + ++L + L P+ ++ L L Sbjct: 631 EHIAIIDLMNLADALLLPRDDLALAVALKSPLFGL----DDDDLFKL------------- 673 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 WQ ++ A Sbjct: 674 ------------------------------------AWQRKGTLRDALAGHATADDKFRD 697 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 L A++ P + + + + A + L Sbjct: 698 AFESLKRCESRAARDTPFAFFAWLLGEEAGRRRILRRLGHEA----NDALDEFLELALTC 753 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG------- 679 + L L + + V + T+ + + VV L Sbjct: 754 ERKAPASLQGFMAWLRAADTEVKRDMEISRDEVRVMTVHGAKGLEASVVFLADTSTSPAD 813 Query: 680 --------MNDGVYP---------RQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 M G P ++Q + R L A+ Sbjct: 814 TERLSLIRMGRGNAPAGVAGVTIWAGRKAEDPPCVAQARAAMTAETEHEYRRLLYVAMTR 873 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 A +L + + + + F + E + A + R Sbjct: 874 AADRLIVGGCKPANRKDVREFSWYHLIEKGLANSGLAMQEIETASGKVKRFTRPDHDDPG 933 Query: 783 LHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWA 842 + + + ER + + A + L + Sbjct: 934 SNRSRIMNVIDSNILERDAGGKPLHTFPHPALEEAEPDAAGPAPPASPGATRIPLPPWLH 993 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFI------LEGLSRYQINQQLLNALVEQDDAER 896 R + D P R + +LL +L E R Sbjct: 994 LAAAPEAPARRSLYPSDADEAAHQRAPAGAIPDQRHRARLRGTLVHRLLQSLPEVPRDRR 1053 Query: 897 LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD--RVIACRQPGQSMEIDL-------AC 947 G G G+ + + + D R G E+ + Sbjct: 1054 REAALSYLGRNASGW-GKTEHDALAARVVAVLDDARFAPVFAEGSRAEVAIVGRLTTRRG 1112 Query: 948 NGVQITGWLPQVQPDGLLRWRPSLLSVA-------QGMQLWLEHLVYCASGGNGESR--- 997 + + ++G + ++ + ++ L + G Sbjct: 1113 DPLPVSGQIDRLVVTPHG-VLVVDYKTSPAPASLADVPPAYIRQLALYRAMLAGLYPELP 1171 Query: 998 --LFLRKDGEWRFPPLAAEQALHYLSQLIEG 1026 L ++A L +I Sbjct: 1172 VNAALLWTETPEMMEISASTLDAALEAIISV 1202 >UniRef50_C6XFZ3 Double-strand break repair protein AddB n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFZ3_LIBAP Length = 1040 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 114/1027 (11%), Positives = 267/1027 (25%), Gaps = 185/1027 (18%) Query: 17 MEFIVERERLDDPF--EPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMFV 74 + + L +P I V + Q L+ + G + I P+ S + Sbjct: 30 LVENFRYDPL-NPLLLASVTIYVPTKRAIQELRSEFIEITGKKSTI-LPIIKSLGDVVEE 87 Query: 75 RVLPE-------------IPKESAFNKQSMSWKLMTLLPQLLER--EDFTLLRHYLTDDS 119 + + I + + + W+ LP +++ + L+ Sbjct: 88 KFTADLLLSYNLNPPVSNIQRLLELARLILIWR--NKLPDIIKDLYPESP-----LSLPI 140 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQ-APLWKALVEYTHQ 178 L+ AD+ D ++ + +WE H ++ W A + + Sbjct: 141 SPANAIWLAKNLADIID--IIETEE--KKWEDLHALKNEKYGMWWLLAADFLKIASKYWT 196 Query: 179 LGQPRWHRANLYQRFIETLESATTC-PPGLPSRVFICGISALPPVYLQALQALGKH---- 233 + ++ I + + G + I G + P + + + H Sbjct: 197 ERLVELNASSPVGYQIALMRAEAEHLMKGTKGPIIIAGSTGSIPATARLMSTVANHPNGA 256 Query: 234 -------IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 I N +I + D D + G + Sbjct: 257 IVLPGLDCHIPTAIWNTITEKSTNITSSNTTYSTHPQYSLAKLLDFLDIKREDVKRLGNV 316 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE 346 N GR + S L D+ +++ I ++ Sbjct: 317 SNEMY---------------GRSMVISKSFLPPDTSDMRNTDI--------LENKIPNIQ 353 Query: 347 NRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 + + + E + L L+E+ + Sbjct: 354 KCFS----------------------DVALIEADNEREEAISIAIALRMSLDENKKKS-- 389 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 ++ AD + + + IS + SLL+ Sbjct: 390 --ALITADRN-----LARRVKLELTRFGINIDISAGIPLSTTLHSSILTSLLNAIFKLND 442 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNE-SGIRWGIDDDNVRELELPA------- 518 + L+ P+ F + G + D +++ L L Sbjct: 443 FMAIATLVKHPLAKFGFPEKYLSRAKNALELVALRGNKNSYDIMDLKSLVLDRIATQKNN 502 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 T W+ L+ A+ Q + P G+L Sbjct: 503 THVPHWQSRLSEEDKELAVLLVDHILQCITPLVTYKTNKNSTCGNL-------------- 548 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ--QWQAIIAEGLGAQYGDAVPLSL 636 + +W + L L + + E+ ++ ++ + Sbjct: 549 ----SISDWTKLTVTCLQNVCLDEHRKLPNLWFEEEGKTLSSLFSKIIETGSCIKANAIE 604 Query: 637 LRDELAQRLDQERI-SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 D + + +D E + + + + I + R + F + L G+N+GV+P+ A F Sbjct: 605 WIDIITRLIDGETVKPKIEKSSTLFILGTLESRLLNFDTLILGGLNEGVWPKNTAKNPFL 664 Query: 696 LMSQKPKRGDRSRRDDDRYLFLEA--LISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 + ++ ++Y+ A A ++ Y ++N S +Q L+ Sbjct: 665 SRVMQSDLNLKTA---EKYIGQAAHDFEMANGTRHLIYTRSLRENNIPTIASRWLQRLLV 721 Query: 754 YIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQA 813 G + + G+ L ++ Sbjct: 722 LGGTDFFDNLKKR------------------------------GQCYLDWTRKLDYTTKQ 751 Query: 814 GKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE 873 P P T +++ P + + L+++F + PD Sbjct: 752 PHYKRPKPFPPLEAQPRTYSFSEIKQLINDPYAVYARRILKLDFIPHFKKDPDR------ 805 Query: 874 GLSRYQINQQLLNALVEQDDA----------ERLFRRFRAAGDLPYGAFGEIFWETQCQE 923 R + ++ L+++ +++ +LP I+ + Sbjct: 806 -TDRGTLFHNIITELIKKRINKNTPEINHLMKQIIDSHFEKENLPP-HIDIIWRHLFHKI 863 Query: 924 MQQLADRVIACR------QPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQG 977 + + ++ + G+ +TG+ ++ + Sbjct: 864 SHSFLEHEEKIQSSIEKIFVNIPAKMAIESIGIHLTGFADRIDLLKSGFVDITDYKTGDN 923 Query: 978 MQLWLEH 984 + Sbjct: 924 PKKETAQ 930 >UniRef50_A3YTS6 ATP-depentend DNA helicase n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YTS6_9SYNE Length = 602 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 79/631 (12%), Positives = 162/631 (25%), Gaps = 90/631 (14%) Query: 125 FQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRW 184 +++ Y+ RPD+ E EA K L E Sbjct: 54 HSFAAEILRQHGHYIGLRPDFTILVEQADREAVATEAM-------KMLSEDVADTIPGAS 106 Query: 185 HRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPC 244 + L + + + L +S L Y L + Sbjct: 107 NALPLIDKMLAECSNPEELAERLGEHKHKEFLSQLFNAYRSKLIK----GNHLDFASLIG 162 Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG--EQDVGNPLLAS 302 + PA + R ++ + L + V + Sbjct: 163 MAAQLLEERPAIARQFQRVYRYICVDEFQDTNKTQFRLLCSLVPEERPNLFVVADDDQLI 222 Query: 303 WGKLGRDYIYL--LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 + G + L L + S + + + + + ++ + ++ Sbjct: 223 YQWNGANPKRLQELQNRFSVEIVQLPENYRCPPAVIELANN------LIIHNLDRSAGKE 276 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + D+ + ++EVE + D L P + +V+ Sbjct: 277 RLRAHKVSTADTHLRVFYFGDFRQEVEWVVDELKK----TPPDSRNSTVVLGRSKKLLDA 332 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 I + P IS R+++ + + L L ++R E + + Sbjct: 333 VIT-----ECKQQGFPAYISIRKSQFISAPVTWLHAALRLANARQDREQLRRVCKAFFSL 387 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 +I E + + + + Sbjct: 388 EGNNIRVEDV-----------------------------------------VATSSFQGG 406 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + + + G L + L WL ++ A Sbjct: 407 DYLRGWLEAALDQQTVSVATRGFLEHMKNTLLERLNHWLFIDSAFRWLDAIQNQPAATDN 466 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 E + + W + E + D V L L E R + V Sbjct: 467 AFDEYQVE----KDVWFLLQQEVIQQYGKDEVSLHSLLQEFDLRSKEAP----PPKDAVR 518 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 T+ + + FK V LLG+ + P + + K D ++R A+ Sbjct: 519 CMTIHSSKGLEFKRVYLLGLVEDQLPSW---------AARKKGDDSFEMSEERRNCFVAI 569 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 A+++L +SY + PS + E+ Sbjct: 570 TRAEEELILSYS--DRYFGYPKTPSRFLTEM 598 >UniRef50_C7MLK4 ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MLK4_CRYCD Length = 1262 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 71/609 (11%), Positives = 155/609 (25%), Gaps = 111/609 (18%) Query: 192 RFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDI 251 + + A + + + L + +A+ Sbjct: 263 ELKDAVSEAKALLQLSAASEMLDELIDLAQRTEEKYRAILHARAQLDTSDLIRTTLRLFK 322 Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD--GEQDVGNPLLASWGKLGRD 309 ++PA R + ++ + + + +D VG+ + + G D Sbjct: 323 QNPALARTYTERFKLIMVDEFQDTSQLQIDLIEFITGADKHNLCTVGDSQQSIYRFQGAD 382 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE-----------EF 358 L + + + + I + Sbjct: 383 VEVYLRHKRDMLS------DAVGARIEQLDDNFRSHADVLALVRRICGQKGYFSEEFLDL 436 Query: 359 SRSDNKRPLDPLDSSIT--FHVCHSPQR----EVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 + + DS I C S + E + R A+ RD++V++ Sbjct: 437 KAAGPGKTWLSSDSRIEMALTRCTSAEAGARCEAAHIARRFAAL--RQAGHKARDMVVLM 494 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 + ++ A D LP ++ P ++ L+++ + + SE +L Sbjct: 495 GSTTA-----SDIYAQALRDEGLPCIVAGGSKFFEAPWVDLCQRLVNVLANPYDSESLLM 549 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 +L +L ++ + L +L + NE T Sbjct: 550 VLTSELLP----VSSDDLLFLATYHNEV----------------------TGDAVRQNPA 583 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 +G S L L L + L +RP + ++ V Sbjct: 584 VGLLRADRAPFIASEL---------------LDHATDVLKRAWQSLGSQRPRDVFMQVIL 628 Query: 593 D-MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 + A A+ ++ +I E A D ++ + ++ + Sbjct: 629 ESGWLACLEKQGAEGQAIAADILKFARLIEEESYANGFDMARVARALEHRRTLSSEKPGA 688 Query: 652 Q-RFLAGPVNICTLMPMRSIPFKVVCLLGM----NDGVYPRQLAPLG----FDLMSQKPK 702 + V I T+ + + F +V + G P L G S Sbjct: 689 LTIEGSDAVRIMTVHASKGLEFPIVAIANCYTTRTTGERPYMLTDQGKIALTLPPSDLKA 748 Query: 703 RGDRSRR----------------------------DDDRYLFLEALISAQQKLYISYIGR 734 + + LF A A + + + Sbjct: 749 PKLPEELADATTPFEATNQLEFLQLIRKIDTDRKYAERKRLFYVAATRASDAVIVCLKHK 808 Query: 735 SIQDNSERF 743 +D S + Sbjct: 809 LKKDGSPQE 817 >UniRef50_C0WBY1 Predicted protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WBY1_9FIRM Length = 1037 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 79/759 (10%), Positives = 205/759 (27%), Gaps = 101/759 (13%) Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQEL 323 + + + P + + L+ + GK L D Sbjct: 201 LYDAALDVLQDPGAILPWEKLYFSEFNELTGLQMALVKALGKRVSISFGLFYDESRPDLS 260 Query: 324 DAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQ 383 +A + D LL + I+ + + I S Sbjct: 261 EATRKLEED-LLGDGYEKIIAPKKVSRPEDLAYFAETFPKATGDAVAAQHIYLGEASSVD 319 Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 E++++ + L+ + P +I+++V +++ Y G + L ++D Sbjct: 320 SEIKMVLTDVKKKLKS--GVAPHEILLLVRNLNDYQG-----LGRYMEEYGLLSTLADVT 372 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 P+ L ++ + +LAL+ ++ F + + +L + Sbjct: 373 DLAGQPLPLFLTKLWEAALTKDDTMPLLALMKTTLMQELFHVDRIAVGHLVE-------- 424 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 + T F L R+ + + ++++ Sbjct: 425 --------------ESYIETPGFLLERISHLSGVSDLKPLFEALQTP------------- 457 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAE---TEAAMTLIEQQWQAII 620 WR L + + + + + +E + + + + Sbjct: 458 -----KTCTQWRDYLDERLTEWDLVRTFGRLHQEGKVTLSEVKIMAQSEDFVRAFFDRLE 512 Query: 621 AEGLGAQYGDA-VPLSLLRDELAQRLDQERISQRFL-AGPVNICTLMPMRSIPFKVVCLL 678 A D V L + + L I+ + + ++ +P+ V +L Sbjct: 513 ALFEAVGSKDLSVGLGDIFSYWKEALIGTTITLTPSHEEGIRVMEASDIQGVPYPYVYIL 572 Query: 679 GMNDGVYPRQLAPLGFDLMSQKPKRGD--------RSRRDDDRYLFLEALISAQQKLYIS 730 G+ DG++P ++ + R DR+ F A+ A++++++S Sbjct: 573 GVRDGLFPAISRESWLYSDEERTELAALDIPLGTSARRLARDRFFFASAVSLAEKEVHLS 632 Query: 731 YIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDE--SEARVKAHLTCLHTRMP 788 + S ++ L + + + SE ++ +L Sbjct: 633 WFADDEGG-----ASYYIERLRHFFTPHALPFVTYHSDVHDCYSEPQMVRYLMEAENLGE 687 Query: 789 FDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAF 848 + ++ P + L F P Sbjct: 688 KEATYLADHVDAKILLRAQDEKNRFAPKSLYNGYLGPQEETLHLSASQLDGFLTCPFMYL 747 Query: 849 FQMRLQVNFRTEDSEIPDT---EPFILEGLSRY-------QINQQLLNALVEQDDA--ER 896 F +++ + + P I LSR+ + + L L ++ + Sbjct: 748 FTHVWKLDVKEAKTAFPTPDVVGNLIHLTLSRFMGRHLGEALFTKELEMLWQELSEAYQA 807 Query: 897 LFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD--------------------RVIACRQ 936 + GD+P + + ++ + +++ Sbjct: 808 AYTEMERNGDIPRSRYSDHIRKSYEEWLKRWLRMEVDYEEKSPTGVTVCAVEKAFGRKGA 867 Query: 937 PGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVA 975 ++ + V ++G + ++ Sbjct: 868 AWPPYDLTVDGKKVYLSGQIDRIDRSESGYL-IMDYKTG 905 >UniRef50_C6XP89 UvrD/REP helicase n=7 Tax=Proteobacteria RepID=C6XP89_HIRBI Length = 1134 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 100/904 (11%), Positives = 214/904 (23%), Gaps = 164/904 (18%) Query: 143 PDWLAQWETGHLVEGLGEAQAWQAPLWKALVE------YTHQLGQPRWHRANLYQRFIET 196 P + + E L+E ++ L + Q R+ + Sbjct: 297 PRMMDRIEAVELLEEEFPRLDL--AHYRNLYDPTQIISDILQAISRAKDEVVDPARYADL 354 Query: 197 LESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAY 256 + RV + VY + + L ++ P Sbjct: 355 AKEMAASATTEDQRVAAAKALEVARVY-ELYERLKANVHCVDFGDLVSMPVRLLESRPDI 413 Query: 257 LAKLLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASWGKLGRDYIYLLS 315 L ++ ++ + L + VG+ + + G + Sbjct: 414 CEHLRSQYDHILVDEYQDVNRSSVRLLTALCPDGRNLWAVGDAKQSIYRFRGASSFNMAR 473 Query: 316 DLESSQELDAFVDVTPDNLLHNIQSDILELENRA------VAGVNIEEFSRSDNKRPLDP 369 S P ++ + +E A + + + Sbjct: 474 FGVS---------DFPGGERGRLKKNYRSVEEIVDTFSDFAAAMIVGDTESGLEAVRGSS 524 Query: 370 LDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSA 429 D S T ++ + + + + R+ +V+ + S G + Sbjct: 525 GDRS-TLRKVAQAPDQIVAIAEAIQERHRD--GCAFREQVVLCTGNEKLSEI-----GQS 576 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +P + P ++ +SLL++ + V F++ + Sbjct: 577 LERLGVPVLFLG--SLFERPEIKDLMSLLTILSDKRAMGMVRVACI-----GDFEMPIDD 629 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 + + + + S + + L E Q ++ Sbjct: 630 VGKIYRHLRSS-------------------DGNPKSWLENTDLTATLSECGQMSLANLKA 670 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + +E +A LL+ L+ + Sbjct: 671 AFDGFDDTSEPWAVIAHLLLDRTSIAARLSISEMMAHRTQGIA----------------- 713 Query: 610 TLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLA----GPVNICTLM 665 I Q + ++ G L +R + D + Q LA V + T+ Sbjct: 714 --IWQFLNFLRSQPTGQGLPIKRLLDRVRRLVRLG-DDRNLRQLPLAAQGIDAVRLMTIH 770 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR--------DDDRYLFL 717 + + F+ V L G+N PR + + ++ LF Sbjct: 771 GAKGLEFETVHLPGLNADTIPRNPPLPTCPPPDGMVEGTTETALEAFRTAQAEEQECLFF 830 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVK 777 A+ A+ +L I + + S+R S + L I PG E Sbjct: 831 VAMSRARDRLLIYAPTQ-KSNGSKRNLSSFIDRLGSRIDHETIQPGGELP---------- 879 Query: 778 AHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETL 837 A E Q L Sbjct: 880 ------------------------AAPEMADVMLQVSGRVR-------------FSGAQL 902 Query: 838 QRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQD---DA 894 + P R F+ LQV R + + ++ + ++ +V + Sbjct: 903 SLYERCPRRFFYTHVLQVGGRRTATPF----------MQMHEAVRAVVKDVVAGKTTVSS 952 Query: 895 ERLFRRFRAAG----DLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGV 950 E R A +L + + E + + + + Sbjct: 953 EAELRSQVAREFSIHELSDNGYIREYTEYAVAMISFFLSARDGHTPEAPTA-VRVRLGDE 1011 Query: 951 QITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLE-------HLVYCASGGNGESRLFLRKD 1003 ++T V + + + L + E D Sbjct: 1012 ELTIEPDDVLLRADGSRTVRKVQTGHFRKSETDDVGTAAFLLAVRQAFPGAEVEFIHLSD 1071 Query: 1004 GEWR 1007 R Sbjct: 1072 QSAR 1075 >UniRef50_A6GVZ8 Putative uncharacterized protein n=3 Tax=Flavobacteriales RepID=A6GVZ8_FLAPJ Length = 922 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 110/993 (11%), Positives = 262/993 (26%), Gaps = 201/993 (20%) Query: 99 LPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGL 158 LP + T + ++ + ++ R + LF+ Y VY + Sbjct: 46 LPHFTFAPEITSIEDFIQEIANIRSI----DSIELLFEFYTVY-----LSVTAKEKQQTF 96 Query: 159 GEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA 218 + W L + + H + Q IE ++ + Sbjct: 97 EQFSNWGKTLLQDF-NEIDRYLLDPKHVFSYLQD-IEVIKRWGIEIED---------KTT 145 Query: 219 LPPVYLQALQAL-GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLF 277 L YL+ + L + + N Y G I Y + + + + +F Sbjct: 146 LIDNYLEFWKLLPLYYDTFYTHLKNKEIGYQGLI----YREAVTNLEEFITAFKNKKIVF 201 Query: 278 RDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHN 337 Q +Q + + + + + ++ + S + FV + Sbjct: 202 AGFNALNQAEEKIVQQLIAKDIASIYWDIDAVFLN-----DYSHDAGLFVRRFKSS---- 252 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAML 397 + + + + D +I + +++ + + Sbjct: 253 ---------------WSHYKTNPFEWVSTNFSEDKNIQIIGTAKAIGQAKIVSGIINKQI 297 Query: 398 EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 ++P + + +++ D + P + ++ S I+ + +++P+ L Sbjct: 298 SDNPNASLDKVALVLGDENMLIPMLHSLPASVG-----SLNITMGYSSKNNPIQLLIAKL 352 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 + ++ + + + V + + +++ Sbjct: 353 FKMHNNALNRSESSYVFYYKDVLDVLSNPIIESYVNASKVIYTIKKNNYTFITHQKVVSF 412 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 + L + +E + + +L + I+E + + L + Sbjct: 413 QENPNRLFELLFQKWNQKPIEILELICEILLIIKSNLESISEEDKVVKTFLYSIYKVINK 472 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 L E++ + I +Q + Sbjct: 473 LITYCSKNEYIENIDT---------------LHTIYKQVIDLAEVSFE------------ 505 Query: 638 RDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLM 697 + I ++ R + F+ V + +N+G +P F Sbjct: 506 ---------------GEPLSGLQIMGVLESRVLDFETVIITSLNEGKFPAGKTVNSFIPY 550 Query: 698 SQKPKRGDR---SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 K + G + Y F L A+ + D E+ S + +L Sbjct: 551 DVKRELGLPTYKEKDAIYTYHFYHLLQRAKNIYLLYNTESDGLDGGEK--SRFITQL--- 605 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG 814 + N Q Sbjct: 606 -------------------------EVEKQPKH-----NLTHEIIQPVVPNIASKTIVIP 635 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 KA S ++ + L + +P++ +FQ L + E E Sbjct: 636 KAKSAMIRLKEIATGKGFSPSALTTYIRNPIQFYFQRILSIRESEEVEENIALNTL---- 691 Query: 875 LSRYQINQQLLNALVEQ-----DDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD 929 I Q L AL + + L + A D F EI+ E + ++ + L Sbjct: 692 ---GTIIHQTLEALYKPIINKFLTTDDLNKMLAVANDEVLKQFKEIYKEGEVKKGKNLLA 748 Query: 930 ----------------RVIACRQPGQSMEIDLACNG----------VQITGWLPQVQPDG 963 + I + + ++ ++I G + +++ Sbjct: 749 FEVAKRNVFNFLIEEKKQIENGDVVKILALETPLERILEDNSLPFPIKIAGNVDRIEIRN 808 Query: 964 LLRWRPSLLSVAQGM------QLW------------LEHLVY------CASGGNGESRLF 999 R + + W ++ L Y A+G E+ + Sbjct: 809 NK-IRIIDYKTGKVEKNSVQLKDWNGLTLDIKNDKIIQLLCYAFMYEKQANGLEIEAGII 867 Query: 1000 LRKDGEWRFPPLAAEQALHYL----SQLIEGYR 1028 K+ + F P +Q L S+++E ++ Sbjct: 868 SFKNMKGGFLPFGIKQGKEILININSEILEHFK 900 >UniRef50_C7JGX2 DNA helicase II UvrD/Rep n=11 Tax=Acetobacteraceae RepID=C7JGX2_ACEP3 Length = 1190 Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 114/1067 (10%), Positives = 242/1067 (22%), Gaps = 181/1067 (16%) Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNK-QSMSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 DF + + F+K +++ +++ L P +L L T+ Sbjct: 201 DFIFISGVLRKDERSSSLLKLVVEDFDKAEAVLCQILGLSPDILHGSTSEFLEKSCTNFP 260 Query: 120 DKRKL---FQ-LSSKAADLFDQYLVYRPDWLA--------QWETGHLVEGLGE-AQAWQA 166 +++ L FQ LS + ++ + DWLA QW E Sbjct: 261 EEQNLREGFQILSEEGSEAIKRNAFSLLDWLALPASERAAQWSVWRNGFLTKEGKLRSVG 320 Query: 167 PLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQA 226 + K L E + + + E L + G +S+L Sbjct: 321 LISKKLSEKYSDISLYIQKESERISKVEEHLRARKLAEMGSALLKMAAAVSSLYTTQK-- 378 Query: 227 LQALGKHIEI-HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQ 285 +H +I + + + KL ++ + AG Sbjct: 379 ----ARHGQIEYDDLIQRALGLLREPGAAWVMYKLDGGIDHLLLDEVQDTSPEQWRIAGD 434 Query: 286 LFNS--------------DGEQDVGNPLLASWGKLGRDYIYLLS----DLESSQELDAFV 327 L VG+ + +G G D + Q+ Sbjct: 435 LTEEFFAGLGGRSEDEPPRTIFAVGDYKQSIYGFQGADPDSFREWRQKFKKRVQDAHLLW 494 Query: 328 DVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN------KRPLDPLDSSITFHVCHS 381 + + +L+L + A + + + Sbjct: 495 REPELTVSFRSTAPVLKLVDAVFADPEAAKGVVEEPGQIMEHITARPGEGGRVELWPLVE 554 Query: 382 PQRE-----------------------VEVLHDRLLAMLEE-----DPTLTPRDIIVMVA 413 ++E + + + L + LTP D++V+V Sbjct: 555 AEKEEDIISPWEPAQGNATRQSPRQKLADAVAGYIFRQLNQKPLSGQKPLTPGDVLVLVP 614 Query: 414 DIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 + + A +P R H ++ +SL + + + Sbjct: 615 RRSPFVGMLVR----ALKGHNIPVVTLVRTGLAEHLAVQDMLSLCAALLLPQDDLTLACV 670 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 L P+ + + L Q W+ + Sbjct: 671 LTSPLGGVS-----------DNSLMALAAGREKGEPLWSALRERHAEQSDWKQAWNFLNG 719 Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD 593 + ++ + G A + L Sbjct: 720 LFRQVDYLTPYEFLSAALGPGGARARFLARLGP--------------------------- 752 Query: 594 MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR 653 + +++ + Q L + + + Sbjct: 753 -----------------EAAEPIDELLSAAIRYQDQHPPSLQGFLHWMRHSEETVKREAE 795 Query: 654 FLAGPVNICTLMPMRSIPFKVVCLLG------MNDGVYPRQLAPLGFDLMSQKPKRGDRS 707 V I T + + ++V L + ++ D+ P+ Sbjct: 796 AGGDSVRIMTAHGSKGLQARLVILPDTVGLPRFEERLFWAHDKKQNIDVPLYVPRNALSV 855 Query: 708 RR-------------DDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY 754 ++ L AL A +L + P+ E Sbjct: 856 GLTRSLKDVMRSRVVEEYNRLLYVALTRAADRLVVCGWKPGR-----NVPAESWYERCRI 910 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAG 814 + + S + + T P ++ +S LP Sbjct: 911 GFEKAGATEIDFQEGGWSGSMLLLEETPQEEVNP--KKSVPTSVEKSEDTALLPQWMGTA 968 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILE- 873 + L + P + +I P Sbjct: 969 PLWKPTLPEAESPLARPLAPSKPDDAMLGP----------LPPVRSPLDIAAVTPAKARE 1018 Query: 874 -GLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD--R 930 R + LL + AE+ P Q++ + Sbjct: 1019 AAFRRGNLVHSLLQ-FLPACSAEQQPAMAHQWLARPASGLSSHEAAELAQQVIAVLRLPE 1077 Query: 931 VIACRQPGQSMEIDLAC--NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLE----- 983 + P E LA G I G + +++ + +E Sbjct: 1078 LADLFDPSARAEQRLAGVAGGQVIVGQVDRLRVLPNK-VLVCDFKTGRHAPRGVEDTPVL 1136 Query: 984 HLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREG 1030 +L A+ ++ + +A L++ Y G Sbjct: 1137 YLRQMAAYRALLQGIWPDRPVVCVLVWTEMPRADVLPDALLDKYAPG 1183 >UniRef50_Q1YTF0 UvrD/REP helicase family protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTF0_9GAMM Length = 1147 Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 107/870 (12%), Positives = 199/870 (22%), Gaps = 178/870 (20%) Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL----- 286 + I L N GD +L + R ++ + + QL Sbjct: 374 DYPAITLAALNALEPEAGDGVVSDITLRLDYQLRHILVDEFQDTSAAQIKLLEQLIGGWQ 433 Query: 287 -FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL 345 + VG+ + + +G + L+ + Q I+E Sbjct: 434 PDDGRTLFLVGDAMQSLYGFRNANVGLFLNAQRHPVG-PVQCRPLTLSSNFRSQLGIIEW 492 Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQ--------------REVEVLHD 391 N A S P P S+ + Q E + Sbjct: 493 VNSAFTDAFPAHADISRGAIPYSP---SVAVKAADNAQSVSFQGFSGDNHKLDEAAYIA- 548 Query: 392 RLLAMLEEDPTLTPRD-IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV 450 + + P + I ++V I A + L + D S Sbjct: 549 ---KLCSDLRDHKPDESIAILVRGRGHLRSIIP-----ALREAKLFWQAIDITPLASRMP 600 Query: 451 LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDN 510 + +SL S LA+L P G+ G Sbjct: 601 VIDLLSLTRALLSPADKIAWLAVLRAPFC---------------------GLSLGDLLAV 639 Query: 511 VRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQ 570 L H + L+ SA S + + + LL Sbjct: 640 ANSLGDNKENPHKPNNAVLAQLIELLGVSASQL-----HLSHLSQDGQQCLQRIVPLLES 694 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 R +E+ D + + + WQ GA D Sbjct: 695 AWANRGRTNLRASVEQLWIDLGGPATLKDSADLSDARSYLDLLENWQ------TGATVSD 748 Query: 631 AVPLSLLRDELAQRLDQERISQRFLAGP----VNICTLMPMRSIPFKVVCLLGMNDG--- 683 L D+L + G + I T+ + + F V L G++ G Sbjct: 749 WNSFKLAVDKLYAAPSPDDGGSDNTDGSQKSVIQIMTIHKAKGLEFDHVILPGLSRGSGS 808 Query: 684 ---------------------VYPRQLAPLGFDLMSQKPKRGD-RSRRDDDRYLFLEALI 721 + P D + KR D R + + A Sbjct: 809 DKKQLMRWQQHIDEHSDSSLIMAPLGAHDEEDDSVYSYLKREDSLKTRLESTRVLYVAAT 868 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 A ++LY+ + +++ Sbjct: 869 RAVRRLYLCGAVKQLKNGQ----------------------------------------- 887 Query: 782 CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFW 841 P +S ++ +E +P + L + Sbjct: 888 ----WQPTGKTTLLTPIWKSIETGLDQGLYAVQQSATELADKDSKEVPSLRHIRRLDGQF 943 Query: 842 AHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD-------- 893 P R L + ++ S + + L L + Sbjct: 944 QSPQRPDTSANLGTPETSAETGSDIDSSLSSRARSMGTVLHRTLKQLANEGVEQWPESRI 1003 Query: 894 ---AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL----A 946 + + G L + + + R I E L + Sbjct: 1004 SQLPATWGAQLKELGMLARPDELKSLLDAVNSMLADQRGRWILQHHEQAQCEQALGYRYS 1063 Query: 947 CNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEW 1006 G T + + + RW ++ + G E++ +R+ + Sbjct: 1064 DRGHVGTSVIDRTFVENGTRW-IIDYKLS------------QPAEGESETQFIVRQSSAY 1110 Query: 1007 RFPPLAAEQALHYLSQLIEGYREGMSAPLL 1036 LS + YR + P+ Sbjct: 1111 S----------AQLSHYAKLYRSMQANPVH 1130 >UniRef50_Q2FUG2 ATP-dependent nuclease subunit B-like n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FUG2_METHJ Length = 1140 Score = 137 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 81/605 (13%), Positives = 173/605 (28%), Gaps = 76/605 (12%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 I+ P E+ + ++ + E ++ DI + D S + A D Sbjct: 278 ISGMGFSDPATEMREVIREIVRLHEI--GVSYEDIAIATPDFRSTRVYAL----EACTDS 331 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 +P S QS P++ ++S+ L + ++++ ++ P EE Sbjct: 332 GIPVRPSQGSLLQSSPLIAYYLSIFDLIEKGMRYDELVRVIQSPYCRF-RWEPEEDADQK 390 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQH-------TWRFGLTRMLLGYAMESAQGEWQS 546 +SG R + + W L +LL E + Sbjct: 391 SGDQKKSGKRDSRYKYLSYKNFDLLCRTYGLDGGHIDWEKRLPDVLLFSDDEGDEQPLPD 450 Query: 547 VLPYDESSGLIAELVGHLASL-----------LMQLNIWRRGLAQERPLEEWLPVCRDML 595 + +S ++ L +++L + L +R + E + + +L Sbjct: 451 GQGFVQSKKPVSRTYHPRRPLEKQEIADTIEGIIRLVGIIKRLRDKRTIREHIWHFKTIL 510 Query: 596 NAFFLPDAETEAAMTLI----------EQQWQAIIAEGLGAQYGD---------AVPLSL 636 P A +L + +++E V Sbjct: 511 KEIGSPVPGLAHANSLNAWLTDEEYLDLSSFHTLLSELQDLSGTGVISYLNPAVPVTFID 570 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDL 696 + L ++ + A V + + + + V L+ +N+G PR L F Sbjct: 571 FIGAVRHVLQEKSGNVSPDASGVILTGIREIAHQHYPYVFLVSLNEGHIPRLTTRLPFTN 630 Query: 697 MSQKPKRGDR---SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELID 753 S+ + R ++Y F+ AL + LY+S+ +D SV + L Sbjct: 631 SSENSRMDTRTLSDILRQEKYQFITALAAGTTHLYLSWYEH--KDERTVLSSVFIDYLKS 688 Query: 754 --YIGQSHYLPGDEALN--CDESEARVKAHLTCLHTRMPFDPQN---------------Y 794 + + + + + EA A + ++ Sbjct: 689 STLLPEWGRGSDEGGYSGFPGDMEASYSAGVCIHNSEWERSRSYIPEDVLLSSLVQRISI 748 Query: 795 QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQ 854 + R R + + F+ + L+ + P R + + L Sbjct: 749 ERTYRFRLNRSEYDGIIGDDQIIRSAL-HFQFSPAYSWSASMLETYAKCPFRFYLERVLH 807 Query: 855 VNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE 914 + + E + + +++ RL A D + Sbjct: 808 IRPLPDIGSDIPPET-------KGNLIHVIMSRFKRTMHENRLLPIKEAGFDTALSLIRD 860 Query: 915 IFWET 919 I E Sbjct: 861 IAEEE 865 >UniRef50_A5VHK2 ATP-dependent helicase/nuclease subunit A n=10 Tax=Lactobacillus RepID=ADDA_LACRD Length = 1392 Score = 137 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 92/771 (11%), Positives = 190/771 (24%), Gaps = 123/771 (15%) Query: 71 DMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSK 130 M L + + K+ + +L T Q + D + Q Sbjct: 323 QMVSTYLGKQEAQEPIAKEELLTELTTFSDQFTDLLSKATESQLDAKTVDSLQKDQ--QM 380 Query: 131 AADLFDQYLVYRPDW--LAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRAN 188 +L D L+ P W + +G E LG R Sbjct: 381 MQELLD--LLQPPTWNTIRDLFANAKFARMGGKPKDDEL----AEEVYKSLGSARTGIKK 434 Query: 189 LYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGK-HIEIHLLFTNPCRYY 247 + + ++ + L S + L V + + + + H+L + +Y Sbjct: 435 QFDQLVDRFFNYREDQFRLISTHAQELLRELSAVTINFRRRYQQTKLNRHVLEFSDLEHY 494 Query: 248 WGDIKDPAYLA--------KLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG--EQDVGN 297 I P L + ++ + +L + + VG+ Sbjct: 495 AYAILTPPDDQPNWQTLVKDLQNHYQEIMIDEYQDTNRLQESILMKLTSPERKNLFMVGD 554 Query: 298 PLLASWGKLGRDYIYLL------SDLESSQELDAFVDVTPDNLLHNIQS----------- 340 + + D L + + + + + + Sbjct: 555 VKQSIYRFREADPTLFLGKYQNYRQGSDGEAIVLGENFRSMTNVTSFTNILFEQLMDREV 614 Query: 341 ---DILELENRAVAGVNIEEFSRSDNKRPL---------DPLDSSITFHVCHSPQREVEV 388 D E + A EE + DP + H E + Sbjct: 615 GEIDYDEDAHLKYAATYYEENQDNKVHPTEVLLYDANALDPEKEDVE-HEDDKLAGEFRM 673 Query: 389 LHDRLLAMLEEDP-----------TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 + R+ M+E + DI+++ I +P Sbjct: 674 IGMRIKQMVENQELIFHPEDGQMHPIQYGDIVLLERTKA-----INNSLMEEFNKLNIPL 728 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 + D + + +SLL + D+ ++A+L P++ T + L ++R Sbjct: 729 TVHDVESYFQATEVRVMMSLLKIIDNPQQDIPLVAVLRSPIVGL----TNQELAFIRLQN 784 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 + Q S + Sbjct: 785 RSVDYYAALQTFMSNYQRKALRHQSLLT----------------------------SEQV 816 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 L L L ++R+ Q+ ++ + ++ Sbjct: 817 NALYEKADHFLGLLRVFRQTAQQQTLVDLIWQIYDQTGYLDYVGAMPGGHQRQANLHALY 876 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI-SQRFLAGPVNICTLMPMRSIPFKVVC 676 + + +++ + + + A VN+ T+ + + F VV Sbjct: 877 QRAHSYEQSSFKGLYQFIRFIEKMQEHDKDLGVAPTQLTANTVNVMTIHGSKGLQFPVVF 936 Query: 677 LLGMNDGVYPRQLAPL---------GFDLMSQKPKRGD------------RSRRDDDRYL 715 L+ G G M + D R R +D + Sbjct: 937 LIDATHGFNKGAARENAVVDAVAGVGIRYMDDQRVIYDTPQRQAVIEEIQRGERAEDLRV 996 Query: 716 FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA 766 AL A+Q+L I+ S Q + L G + Sbjct: 997 LYVALTRAEQRLVITGSFNEEMRTQSLAGS--WQRWQKAYQSKNLLIGPQP 1045 >UniRef50_B8FB94 Exodeoxyribonuclease V, beta subunit n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FB94_DESAA Length = 1167 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 81/804 (10%), Positives = 172/804 (21%), Gaps = 162/804 (20%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG--EQDVGNPLLASWGKLGRDYI 311 PA + + + ++ + + LF +G+P A +G G D Sbjct: 364 PALADAVRKKYQAALIDEFQDTDAAQYDIFYNLFAGRRQALFLIGDPKQAIYGFRGADLF 423 Query: 312 YLLSDLESSQELDAFVDV-TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK------ 364 L + +E + + L + + +A IE S Sbjct: 424 SYLQASRNVEESYSLENNWRSSPQLIRGVNAVFSRNPQAFVLDGIEFKSVRPKPGVNPAL 483 Query: 365 -------------RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 D ++T + V + + +L +P DI V+ Sbjct: 484 PLEKGQTPPLEIWAVAPKEDKAVTIGEVQNIA--VRAVASEVSRLLGLGE-YSPSDIAVL 540 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 V + ++ P Sbjct: 541 VRSN-----MQAQAVRDGLRQAGVHSVLNRTGDLFETPE--------------------- 574 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 + R +T L+ + + + P Sbjct: 575 ------AVEIRRVMTAAAANRLQNVKAALSVSFLGWTAEELDRLAPGEE----------- 617 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 +E + + + SG + + + L E Sbjct: 618 ----VVEKVLTLFSDLHEIWQKSG--------FMRMFTYFMHNKELPSAVLTLPEGERRL 665 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 ++++ + + + + + + + D+ ++ Sbjct: 666 TNIMHLAEVLHQAEKERKLGVSGLIKWLDRQMDLSSPRK---------------DEHQLR 710 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKR-------- 703 A V + T+ + + F VV M PR+ PL F Q + Sbjct: 711 LESDAQAVQVVTMHGSKGLEFPVVFCPFMWQESEPRKGTPLTFHDPDQDERLTLDLRAED 770 Query: 704 ------GDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ--ELIDYI 755 ++ L AL A+ + Y+ + + P+ L+ + D Sbjct: 771 SPHREQAKLENVAENVRLAYVALTRAKDRCYMLWGAINKA--QTSAPAYLLHGGAVNDGR 828 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 + + +E + + P + G A Sbjct: 829 VEIRLNYKTLFEDLEELAKGAENAIALTLPPEEIYPAAFAAGGANPALEALEFKARPDLT 888 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 L P + P QV E E G+ Sbjct: 889 WSVTSFSALSMDQPGRNEPGADEAAAPGP---------QVEIEDEPEEEAADIFAFPRGI 939 Query: 876 SRYQINQQLLNALVEQDDAE-----------RLFRRFRAAGDLPYGAFGEIFWETQCQEM 924 + + L D A ++ G + + +E Sbjct: 940 GPGIMLHDIFENLDFLDHAPKKVLDLVQDKLEVYGFEDQWAQPVAGMVQNVLFCPLEKER 999 Query: 925 QQLADRVIACRQPGQSMEIDLACNGVQ----------------------------ITGWL 956 I ME + + G++ Sbjct: 1000 PDFTLSRIPMTARSNEMEFYFPIKKITPKAFEGIFGNGLPKDRPDRLHFSPVKGFVHGFM 1059 Query: 957 PQVQPDGLLRWRPSLLSVAQGMQL 980 V R+ Sbjct: 1060 DMVF-CFDGRYYIVDWKSNHLGNA 1082 >UniRef50_Q28JY0 Putative uncharacterized protein n=1 Tax=Jannaschia sp. CCS1 RepID=Q28JY0_JANSC Length = 986 Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats. Identities = 117/1055 (11%), Positives = 274/1055 (25%), Gaps = 174/1055 (16%) Query: 13 LEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQ-MTLSQKFGIAANID-FPLPASFIW 70 L ++ + + + I V + M + LQ + + + G+ I + Sbjct: 23 LIDGLDRALSGQGPEA-LARVEIHVANARMQRRLQTLYIRRGPGLLPRIRPVLSLSETA- 80 Query: 71 DMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSK 130 + P S ++ +L L+ +L++ D + + L+ L+ Sbjct: 81 ----DLEGLPPAMSPL---ALRLELAQLIGKLIDANP---------DLAPRAALYDLADS 124 Query: 131 AADLFDQYLVYR--PDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRAN 188 AD + + PD +A + G E A+ + + + G Sbjct: 125 LADFMGEMVEEGVTPDTIASLDMGEHSEHWTRARDFLG-----IAQQVIATGDRPTPEGR 179 Query: 189 LYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYW 248 + PP P V + G + + ++A+ + ++ R Sbjct: 180 QAAVVDRLIAQWRINPPTHP--VIVAGSTGSRRATFRLMEAVAHLPQGAVILPGIDRDMP 237 Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR 308 G I + E+ Q + VG Sbjct: 238 GAIWRGLLDGR---------------RSGLAGEDHPQYRLAKLLDAVG------------ 270 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 + + TP ++ ++ L A V + + + Sbjct: 271 ---------MDPATVPLWGRATPAVP---ARNAVVSLA-LRPAPVTNQWRTEGPKLTDVS 317 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + +T SPQ E + R+ + + + ++ D + + Sbjct: 318 GAMAGVTLLEAPSPQMEATAIALRMRKGVADGQRV-----ALVTPDRR-----LARKVTA 367 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + S + + + +E ++ALL P+ + D Sbjct: 368 QLDRWRILPDDSAGQVLAQTAPGRFLRQVAEMLCGPVTAEAMVALLKNPLCNSGPDRGN- 426 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVL 548 + T L + G + Sbjct: 427 ------------------------------HLRRTVDLELQLLRKGLTFPTRAALMDWAA 456 Query: 549 PYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE-WLPVCRDMLNAFFLPDAETEA 607 + A + LL + LA+ L + ++ + + Sbjct: 457 ARKDDVDTTAWVTWLADHLLEPVETAALPLAERVALHKSRADALAAGVDQTTTHELYKQE 516 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 E + + A A + L + R + R A V I Sbjct: 517 PGEKAETLLRELQAVADTGGAMSARDYADFFTAL-AHDREVRFALRPHAD-VLIWGTQEA 574 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR---SRRDDDRYLFLEALISAQ 724 R V L G+N+G +P+ + + + G R + F + + A Sbjct: 575 RVQGADVTILAGLNEGTWPQAASADPWLNRPLRADAGLRLPDRVIGLSAHDFQQGI--AG 632 Query: 725 QKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 ++++S R + + P+ + L++ +G Sbjct: 633 GEVWLSRAKRDDETD--TVPARWLNRLVNLLGG-----------------------ASDA 667 Query: 785 TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHP 844 + + E + A ++ A P T + + ++R P Sbjct: 668 SSQALTDMQARGAEWLTLADTLSTPDARETPAPRPAPAPQNITRLTALSVTDIERLIRDP 727 Query: 845 VRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL------- 897 + L + PD R + +++ + + Sbjct: 728 YAIYAARMLNLRALDPLRASPD-------ARLRGTVFHRIMEQFITATPTDLPEDAGQVF 780 Query: 898 --FRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEID------LACNG 949 A D P+ A ++ + + + R + ++ + G Sbjct: 781 MGLAGDILAQDAPWPAARHLWRHRLQTILPWYLAQEASFRALAEPWVLEERKDWHVPGLG 840 Query: 950 VQITGWLPQVQPDGLLRWRPSLLSVAQGMQL-----WLEHLVYCAS----GGNGESRLFL 1000 + ++G ++ R + + L+ A G + L + Sbjct: 841 MTLSGIADRIDSLPDGRVAIYDYKTGNLPTDRMEIAYNKQLLLLALMGRGGAFADRPLDV 900 Query: 1001 RKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPL 1035 + +A + L++ +G+ + Sbjct: 901 ARLAYVGLGTKPEIRAQDFDDGLLDETFKGLRELI 935 >UniRef50_C2HA17 UvrD Rep family helicase n=12 Tax=Enterococcus faecium RepID=C2HA17_ENTFC Length = 744 Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats. Identities = 65/633 (10%), Positives = 184/633 (29%), Gaps = 89/633 (14%) Query: 133 DLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPR-----WHRA 187 ++++ P+ Q G + + A L + + +Y L R Sbjct: 177 RIYNEICRKFPEVAMQGIQGDFSKDTAQKVN--AVLQQLIRKYNLYLFDQYGEKTIASRL 234 Query: 188 NLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG--KHIEIHLLFTNPCR 245 + +Q ++E + + L L K + L F + + Sbjct: 235 DYWQNMNLSIEEMIQLVKEKYDSIDKNTRQPISERLYGLLTELQEQKRRQQLLEFNDVLQ 294 Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG--EQDVGNPLLASW 303 +++ + + ++ + E ++ +G VG+ + + Sbjct: 295 NLKSALENEEIQHYIGQKYDYLFIDEFQDTNPLQWEIVKRMTKENGIKLIVVGDDDQSIY 354 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE----EFS 359 G G + F P L + + + Sbjct: 355 GFRG----------SEPAYIKNFEKEYPTKTLFLLT-NYRSRAAIVQGANRLISYNKNDR 403 Query: 360 RSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 P + ++ + E + L ++ + ++++ ++ I++ Sbjct: 404 IPKAMIPAQKEAGVMEAYLFSDTKAESQWLISQIQSFIQKNG--KYKESIILYRSASQTQ 461 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + + +P+ + + Sbjct: 462 QLV-----QSLLKTNIPFVLEADSPYE--------------------------------- 483 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + +S ++ + + + P T++ L ++++ ++ Sbjct: 484 --------------GIFGIKSFQQFYQKIVHWQTAQNPQKKNQTYQQLLRQLMVDCYLKK 529 Query: 540 A--QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 + + + I + +L S ++ + L + +E + + L+ Sbjct: 530 SECDQYFSPKYQNTAITDYILSVRPNLKSKSAEIRQFEEALRKTDQHQEVYSLVQSYLHL 589 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAG 657 + ++ I ++ + + EL RL R + Sbjct: 590 PRIAKEIDQSDQEWIREEVKQHATFRSIQALSQETQATA--KELKTRLIAYRQGKL---D 644 Query: 658 PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFL 717 + I ++ + + ++ V L+G N+G P A + S + K + +++R LF Sbjct: 645 ALCIQSIHKSKGLSYRNVFLIGCNEGSLPYNGATEKKVIDSNEIKAEPVTTIEEERRLFY 704 Query: 718 EALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 A+ A+ +LY+ +++ + S V+E Sbjct: 705 VAMTRARNRLYLCVPQ--MKNTRKLKVSRFVKE 735 >UniRef50_C5RQN8 Recombination helicase AddA n=1 Tax=Clostridium cellulovorans 743B RepID=C5RQN8_CLOCL Length = 1287 Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats. Identities = 54/560 (9%), Positives = 132/560 (23%), Gaps = 139/560 (24%) Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGE----QDVGNPLLASWGKLGRDYIYL 313 ++ + ++ + F E + D VG+ + + Sbjct: 400 LEIRRKFEEIMIDEYQDSSFIQEEIMTTISRKDEAVPNMFMVGDVKQSIYKFRQAKPELF 459 Query: 314 LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK--------- 364 L E+ +ELD + + + + I + S Sbjct: 460 LEKYETYEELDGARNRK-----ILLYKNFRSRKEILDGTNFIFKSIMSKELGELEYTDKE 514 Query: 365 ------------------------RPLDPLDSSITFHVCHSPQRE-----------VEVL 389 + +I E +++ Sbjct: 515 ALNLGADYVTFEDESLTFAEPIDVIIFEKPSGNIEIQKDTDEDAEDLEEINEFQMEAKII 574 Query: 390 HDRLLAMLEEDPTLT--------------PRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 + ++ + +DI++++ + + VF + + Sbjct: 575 GAEIKKIMGREAGYRRKKVFDKGSYRDVEYKDIVILLRSTVNRTD----VFLEELKNLEI 630 Query: 436 PYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQ 495 P + ++ ++LL + D+ +LA+L P+ D Sbjct: 631 PVYADSTSGFFDNIEVKTILALLQVIDNPKQDIPLLAVLRSPIGGFSDD----------- 679 Query: 496 WVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSG 555 + + +M+ + L G Sbjct: 680 ---------------------------------ELIDIKISMDKEYCYFFDKLSNYCVVG 706 Query: 556 LIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ 615 +L + L +LN +R +E + D F+ + Sbjct: 707 SDNDLREKTKAFLRRLNDYRSKSLHLSLVELIWFLFTDTGYLAFVGTLPNGMQRQGNLRI 766 Query: 616 WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ--RFLAGPVNICTLMPMRSIPFK 673 + Y +++ ++ V I T+ + + F Sbjct: 767 LFHRAKQYEATSYRGLFNFINFMEKMKNTSSDLGDAKLLGENDNVVRIMTIHKSKGLEFP 826 Query: 674 VVCLLGMNDGVYPR----------------------QLAPLGFDLMSQKPKRGDRSRRDD 711 VV L + R + L + ++ + Sbjct: 827 VVFLASTSKRFNNRELNNEFLFHHNFGIGIKYTDFEKRISYSSILRNLIQEKMKIENYSE 886 Query: 712 DRYLFLEALISAQQKLYISY 731 + + AL A++KL I+ Sbjct: 887 EMRVLYVALTRAKEKLIITG 906 >UniRef50_B0PD60 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PD60_9FIRM Length = 1174 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 77/841 (9%), Positives = 183/841 (21%), Gaps = 162/841 (19%) Query: 264 QRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE 322 ++ + + N VG+ + + + + Sbjct: 394 YDEVLIDEFQDTNAAQEIIFRAVSQNESNLFMVGDVKQSIYRFRQAMPELFMEKKKRFAP 453 Query: 323 LDAFVDVTPDNLLHNIQSDILELE-----------NRAVAGVNIEEFSRSDNKRPLDPLD 371 D P ++ + + + + ++++ + P Sbjct: 454 YDG--KTFPAKIV--LGKNFRSAQAVTGCVNFFFSQLMSGEIGEVDYNQEEALSPGASFP 509 Query: 372 SSITFH-------------VCHSPQREVEVLHDRLLAMLEED---------PTLTPRDII 409 I S Q E + +++ MLE + P DI Sbjct: 510 EGIEAGCTLRLIDASQYAGELDSTQLEARDVAEQIAGMLERGDLVADGGVTRRVRPSDIC 569 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 V++ + + A R +P + + + ++LL + + + D Sbjct: 570 VLLRSPAQKA----QAYFDALTRRGVPVWAEPKSGFLTSREIAPVVALLRVLGNPTLDID 625 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 + L P+ Sbjct: 626 FASALLSPLFGLT---------------------------------------------AD 640 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 + + + + E+ A + + + RR + + + Sbjct: 641 ELTQIRLTDRRAPLYIAAAKAAEAGDPRAA------NAVDTIARLRRFASNA-TADAVIR 693 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD--- 646 + + + ++ G LS + + +D Sbjct: 694 RIYEECDYMGK--VQAMRMGQARRANLLLLVQYACDYHAGGYKGLSGFIGFVDRLIDRGG 751 Query: 647 --QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD--------- 695 S A V + ++ + + F VV L L Sbjct: 752 DFAPAASMSEQADVVRVMSIHRSKGLEFPVVFLCDTAKRFNREDLNGNTLLHSELGFACV 811 Query: 696 -------------LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 M +RS ++ + AL A+Q++ I+ + ++ Sbjct: 812 RRDFELMKQYTTVPMQALRLELERSMLSEELRVLYVALTRAKQRIVITGVVTKPEE---- 867 Query: 743 FPSVLVQE------LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP 796 LV E L + + D L + + Sbjct: 868 LLCALVSESGTDGKLPPHQVRGANAYLDWILMAAARHPALAERFGLAGAPLDASEAPLTF 927 Query: 797 GERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN 856 + + E + A S L + P + Sbjct: 928 ELKAAADGEPDAEKTSETTAASPDEAALEALRRRLAFRYPFEAQTKIPTKMAVSQLAGSA 987 Query: 857 FRTEDSEIPDTEPF---ILEGLSRYQINQQLLN---ALVEQDDAERLFRRFRAAGDLPYG 910 + L G R + + DA R G L Sbjct: 988 YAASYRFSARPAFLQGDGLTGAQRGNALHKFMQFADYQAAARDASGEIARMAREGFLSRQ 1047 Query: 911 AFGEIFWETQCQEM-QQLADRVIACRQPGQSMEIDLACNGVQI---------------TG 954 I + +LA R+ + +Q + + ++ G Sbjct: 1048 EADSIRPDRVRAFFSSRLAARIFSAKQVWRELRFLAEAGERELGAYSALFTNGGETAIQG 1107 Query: 955 WLPQVQPDGLLRWRPSLLSVAQ------GMQLWLEHLVYCASGGNGESRLFLRKDGEWRF 1008 V + + + + L + + +++ + F Sbjct: 1108 VADCVFLEEDG-AVVVDYKTDRVKTPDELRERYRVQLALYRNALTEALGVPVKECVLYSF 1166 Query: 1009 P 1009 Sbjct: 1167 A 1167 >UniRef50_C1XIE9 DNA/RNA helicase, superfamily I n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XIE9_MEIRU Length = 809 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 94/767 (12%), Positives = 194/767 (25%), Gaps = 123/767 (16%) Query: 89 QSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKL------FQLSSKAADLFDQYLVYR 142 ++ +L L+ + + L + D K + + + L L YR Sbjct: 33 TALVHRLERLVRERVFEPRKILATSFSRLAVDDLKRALARWPHTQAIQVSTL--HALGYR 90 Query: 143 PDWLAQWETGHLVEGLGEAQAWQAPLWK--------ALVEYTHQLGQPRWHRANLYQRFI 194 A E + + + + QA L + L + + Sbjct: 91 IVRKAASEGLLKLAEVRDEGSEQALLQRTLRRARELKLEWVSELENLEAEDFLSYVGACK 150 Query: 195 ETLESATTCPPGLPSRVFICGISALPPVYLQALQAL------GKHIEIHLLFTNPCRYYW 248 L+ A GLP A P L+ L + E L F + W Sbjct: 151 GNLQYADLKGAGLPPAALRVASQAQAPEELEWYLELYKLMEQVRLEEGLLTFDDMLMTGW 210 Query: 249 GDIKD-PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKL 306 + P L + + ++ + SE + VG+ + Sbjct: 211 EVLVRHPGILQTVQKAFQAVLVDEFQDVNLAQSEMLDLITQPHRNYMAVGDDDQTIYEWR 270 Query: 307 GRDYIYLLSDLESS-----QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS 361 G ++L + D F P +L A + + Sbjct: 271 GASPRFILEFAQRYGAKKYLIRDTFRCPAPQVVL-------------AGRVIAHNQQREP 317 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 + + + + L + +L + P ++ V+V Sbjct: 318 KRLSLTKGFQGRVHLRLEPHTPAQAQGLVSDIAGLLAQGR--KPGEMAVLVRLYAQ---- 371 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 +R +PY + P ++ ++ L L + L + + P Sbjct: 372 -TPYIEQCLIERQIPYRVVGSTPFYQRPEIQGLLAYLQLALNP-TKHLWLQVYNTP---- 425 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 + + + + L L G A+ Sbjct: 426 ---------------------KRYLSRALADAVWRRVERGASLVEALRAELAGAEERVAR 464 Query: 542 GEWQSVLPYDESSGLIAELV-GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + ++ G IA+ + L + R L + E + + AF Sbjct: 465 RLRELAELFEWLGGAIAQGPAHAVLVALEARLDYCRHLLRSSGFYEVGVGRAEGVRAFLE 524 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 + + + Q + + ++ Sbjct: 525 YTRDKGR----VFELLQHLERLAQEHLGDE--------------------PAPETRERLS 560 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 + T+ + + + +V + N+G P + +++R LF AL Sbjct: 561 LMTIFRAKGLEWPLVFIPDCNEGTLPYSGS----------------ENLEEERRLFYVAL 604 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 + Q Y+ + S S +QE EAL E L Sbjct: 605 TRSSQHTYLYAL-------SSLPLSPFLQEAEYQQVLGAVERVGEALEMKAEELSTAQTL 657 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT 827 + + ++ + + A AH+E L Sbjct: 658 ALARGAHELGLERFLHRWWKAEQAQPIAAKVLRLFAHAERAGWLEAL 704 >UniRef50_D1C5W8 UvrD/REP helicase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5W8_SPHTD Length = 1125 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 94/918 (10%), Positives = 200/918 (21%), Gaps = 154/918 (16%) Query: 156 EGLGEAQAWQAPLWKALVEYTHQLGQPRWH------RANLYQRFIETLESATTCPPGLPS 209 + L + + L +A++ + + + L A Sbjct: 241 DDLRAVRNDRDALERAILHLPKISQKGARTSWVDPADCDRQKEICRELNEAVEEVKRALR 300 Query: 210 RVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSF 269 I G+ L +++ + P R R Sbjct: 301 AEAIAGLLPLAEDFVRGYTEQRRRTGRAEFEDLLIWARDLLRDRPEVRRYFRERFRCILV 360 Query: 270 EDRELPLFRDSENAGQLFNSD-----------------GEQDVGNPLLASWGKLGRDYIY 312 ++ + E L + VG+P + + D Sbjct: 361 DEFQDTDPLQVEILLYLCGEEPDGVAARDWRELRPAPGRLFLVGDPKQSIYRFRRADISI 420 Query: 313 LLSDLESSQELDA---FVDVTP-DNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 D + ++ + + + LD Sbjct: 421 YEWVKRHVLPGDLCTITQNFRSLGGVIDWVNGCFQHIIAPHDGVQAGYVPLDPWPQARLD 480 Query: 369 PLDSSITFH------VCHSPQR-EVEVLHDRLLAMLEED------------PTLTPRDII 409 + + +R E L L ++ + RD+ Sbjct: 481 LPRAPVVVVHHEMDGSADDVRRYEATTLAALLRQAVDVEGWPVRDPETGEIRPARWRDVA 540 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 +++ ++ A A+ +PY R+ + I+ L D Sbjct: 541 ILIPSRTGI-----EIYEEALAEAGIPYRHEGGRSFFQRQEVRELINCLRAIDDPGDRLS 595 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 ++A L + G + + E A G HT R Sbjct: 596 MVAALRSGAFGCSD-------EEIFLAAEAMGTDFDYRREPPPEHAAVADGMHTLRE--- 645 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 L+ R L + + Sbjct: 646 -----------------------------------------LHTLRHRLPLPELVRRVID 664 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL---- 645 R + A LP + AA ++ + L L Sbjct: 665 ETRLIEYALTLPQGDQAAA------NLLKVVDQARAFAAARGGGLRAFVRWLDTATSRST 718 Query: 646 -DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 +++ V + T+ + + F +V L + + + + G Sbjct: 719 EEEDADVAEAGDDVVRLLTIHAAKGLEFPIVALANLQGRDARTRNVIPDHAVRRLHLRVG 778 Query: 705 -------------------DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 + + L A A+ L + I ER P Sbjct: 779 SQDQGYFETPGYAAAAEIEKQHDAAEQDRLLYVAATRARDHLILPVIIWKGSREKERKPK 838 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 ++ L ++ + D + AHL + P A Sbjct: 839 GMLARLAPHLPVPTPDHSPNGADIDGCHVLLAAHLPVGDNGLRESPPATNVDVDDVLAVR 898 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 +A + +++ + P + P Sbjct: 899 ERWLMERAALLKQAGAGL------QVTTASSVEAWDQEPA-------------DDAEATP 939 Query: 866 DTEPFILEGLSRYQINQQLLNALVEQDDAE-RLFRRFRAAGDLPYGAFGEIFWETQCQEM 924 P L+ + AL DD E R +AA G E+ + Sbjct: 940 GALPRD-AALAVGTALHATMEALDLSDDGEVESMARAKAAEAGVPGHADEVAALARACLA 998 Query: 925 QQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 + R A + + L + G + + + + + ++ Sbjct: 999 SGVVQRARAAERAAREAAFTLPVGDGFVEGRVDLLFREPDGLV-IADYKTDRVTPEQVDA 1057 Query: 985 LVYCASGGNGESRLFLRK 1002 + + + Sbjct: 1058 RLAVYRNQAAVYAFAVAE 1075 >UniRef50_Q0G5V1 Putative uncharacterized protein n=2 Tax=Aurantimonadaceae RepID=Q0G5V1_9RHIZ Length = 1049 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 92/801 (11%), Positives = 194/801 (24%), Gaps = 100/801 (12%) Query: 328 DVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLD--SSITFHVCHSPQRE 385 D +L + + I + A E + D +T P+ E Sbjct: 298 DRDSVGVLESDKHLIARERFLSEALRPAETTEHWSKSGSANGEDALDGLTLIEATEPREE 357 Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 + + L + ++ D + + + S R Sbjct: 358 ALAIACAMRDALSDSKAT----CALITPDRNLARRVVI-----ELERFGIRANDSAGRPL 408 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 +S ++LLS+ + +LALL P++ E + Sbjct: 409 KSTAPGTLVLTLLSVAFTPGDPIPLLALLKHPLVRLGMTSAEARRAARAIELIALRGSVE 468 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ-SVLPYDESSGLIAELVGHL 564 I D + + R + + + L E L Sbjct: 469 IADAAKLSEIVDRRLLGSARPVDDEAAAEVTKQDRIRLSRPAQLVSKEDRELARRFAQAF 528 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE--QQWQAIIAE 622 + + L R +E L ++ V ++L + + E + ++ Sbjct: 529 EASISPLIALRGEATRE--LADYTAVLTEVLETLCRDENGYPRELYAEEPGHALKDFLSS 586 Query: 623 GLGAQYGD-AVPLSLLRDELAQRLDQERISQRFL-AGPVNICTLMPMRSIPFKVVCLLGM 680 + + P + L D + + + R + + + R L G+ Sbjct: 587 LVASPRTGFDFPATELEDVVDALMASVTVRPRGGLSARAFVWGTLEARLQSVDTAILGGL 646 Query: 681 NDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA----LISAQQKLYISYIGRSI 736 N+G +P F + +R + L A + +++ ++ + Sbjct: 647 NEGTWPAGAKNGAFLSRMMRRDIALDPP---ERRIGLAAHDFWMAMGARRVILTRSTK-- 701 Query: 737 QDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQP 796 QD + S +Q + + + + + LH Sbjct: 702 QDGAPTIASRWLQRIAAL------------AGPERTGDLKRRGIVYLH------------ 737 Query: 797 GERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN 856 A L +S+ A +P P + ++ P LQ+ Sbjct: 738 ------AARRLEESSRTAIAARPEPKPPVEKRPRRYSVTEVETLIRDPYAIHATKILQLE 791 Query: 857 FRTEDSEIPDTEPFILEGLSRYQINQQLLNALV-------EQDDAERLFRRFRAA--GDL 907 P R + +L+ V ++L R + Sbjct: 792 PLDPLMRSPA-------AAERGSLYHAILSDFVQNGLDPMADAALDQLLEIARDRFDKEQ 844 Query: 908 PYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACN------GVQITGWLPQVQP 961 +W D ++ + V++ G ++ Sbjct: 845 LPAEIEAFWWPRMEAIASGYLDWERGRNADVAVRHAEIKGSITVTGIDVELVGKADRIDV 904 Query: 962 DGLLRWRPSLLSVAQGMQLWLEHLVYC----ASGGNGESRLFLRKDGEWRFPPLAAEQAL 1017 + + GG F R L + Sbjct: 905 MRDGSIEIIDFKTGTAPSVAQARSLLAPQMPLEGGMALRGGFEDVKDADRIHDLTYVRLR 964 Query: 1018 HYLSQLIEGYREGMSAPLLVLPESGGA-----WLKTCYDAQNDAMLDDDSTLQKARTKFL 1072 + E Y EG++ P ++ A ++F Sbjct: 965 EH-----EVYPEGLAKP---ATKTAEAVDPMDLSVKAITKFESLAAKFQKRETPFTSRFR 1016 Query: 1073 QAYEGNMMVRGEGDDIWYQRL 1093 AY G+ G R Sbjct: 1017 PAYAGDFS----GTYDHLARA 1033 >UniRef50_C7R1Q7 UvrD/REP helicase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R1Q7_JONDD Length = 1059 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 77/764 (10%), Positives = 180/764 (23%), Gaps = 104/764 (13%) Query: 267 HSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAF 326 + +E+ + + G+P + G G +L F Sbjct: 240 IVDDAQEMTAATVALLQVLHRDGARIVMAGDPDMTVQGFRGASPRHLNQATFPRTAPGGF 299 Query: 327 VDVTPDNLLHN-----IQSDILELENRAVAGVNIEEFS----------------RSDNKR 365 ++ + E+ + + + + Sbjct: 300 AAERLTLSTVWRSHPAVRERVREVTSAIASAGIVAHRRATSRHVNRAQDPQASPPDEKPT 359 Query: 366 PLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAV 425 + + H+ S E + + L D + + V+ Sbjct: 360 TVSRTQPGVEAHLAPSIHVETSAIVNTLRHWHI-DEAIAWSSMAVIARSTAHLQRI---- 414 Query: 426 FGSAPADRYLPYAISD-RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 A +P + A + P + + +L A Sbjct: 415 -RRALERAQVPVTVLGTDVALRDEPAVRGLLDVL----------------------ALAR 451 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 L + + + G+ G+D +R+L R R ++ Sbjct: 452 DDTIDLDLVLRVLQ--GVYGGLDSLGIRQLR-RHLRSAELRQDGARTSDELLIDLMATIR 508 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWL-----PVCRDMLNAFF 599 + A +G L +++ +G + W V + Sbjct: 509 DHGHHDIPPHHVAAAAIGRLTAMIQAACTVMQGHTHDAQTALWAVWDAAQVAPTWRHIAL 568 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQR-LDQERISQRFLAGP 658 + A ++ + + + + L + ++ R + Sbjct: 569 SDSPASGRAHDDLDAVMALFRSAETHVDRMPDPSVESFIAFIEAQDLPADSLAIRNQSDH 628 Query: 659 V-NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQ---------------KPK 702 V ++ T ++ V + + DG++P + Sbjct: 629 VVSLLTPQAAAGRQWQRVIITALQDGIWPNLTLRDSLLGSLHLVDILTGRASEDGGPRDS 688 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 D+ F +L AQ+ + ++ + D+ E+ PS + L + L Sbjct: 689 AARTDILHDELRSFALSLSRAQEHVMLTAV-----DDDEQSPSPFLH-LAAPQPRPITLG 742 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK----AHS 818 + S Q +Q + PA+ S Sbjct: 743 DESGPLDMRSVTTAARAALHQALLREDAEQAHQLASLLAAMEPHTPASDPHTWYQAHPVS 802 Query: 819 EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRY 878 + + + +R E +P S Sbjct: 803 TTLPLFHELTTLPLSPSRVDVAQTCSLRWAL-------------ETSGGQPASGLSQSVG 849 Query: 879 QINQQLLNALVEQDDAE--RLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ 936 + + + +L +LP G + + +LA R Sbjct: 850 TLIHDVAAHAPMGTITQFTQLLDERWDQLNLPPGWPAQRLRSQAQTMVGKLAQYTSMVRD 909 Query: 937 PGQSM----EIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 + + G +I+G + +V+ R L + Sbjct: 910 DVVEVLVEHPFTVEIAGARISGSIDRVEILRSGDARIVDLKTGR 953 >UniRef50_C8X833 UvrD/REP helicase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X833_NAKMY Length = 676 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 60/511 (11%), Positives = 126/511 (24%), Gaps = 93/511 (18%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASWGKLGRD 309 + DP ++ R ++ + + L G VG+ A +G G D Sbjct: 208 LADPVVGPQIAGRWDHVLVDEYQDVNATQVDIVHALRPGGHGLTVVGDDAQAIYGFRGSD 267 Query: 310 YIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE---LENRAVAGVNIEEFSRSDNKRP 366 + +L + V P+ + ++ + L + A E Sbjct: 268 HAHL----------RSLVQELPEVTVVRLERNFRSHQRLLDLANVVRPGAEGEHRITLHS 317 Query: 367 LDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVF 426 CH E ++ D +L + R+ V++ + + Sbjct: 318 DRREGRPARLVRCHDAPAEARIIVDSVLEAHQ--KGRRLREQAVLMR-----AAAHSDLL 370 Query: 427 GSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 R +P+ ++ F++ + L D+ +L I Sbjct: 371 EVELTARGVPFVKYGGLKFLEAAHVKDFVAAVRLLDNPRDEVAWYR-----LLRLHDGIG 425 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 R L + + + +D PA + L+ + + + Sbjct: 426 PARARSLLGSLADPELSADLDRHAEAVAAAPAMSRVALAASLSTLADARSRNRIGERARG 485 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 L E L + Sbjct: 486 CL-------------------------------------ELLRPLLTARYRDWSARLGDL 508 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + Q + A + + T+ Sbjct: 509 ERLVGAADQSPDLAAFVAELTLDPP-----------ASTSDLAGPPSQDDDYLVLSTVHS 557 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + + VV +L + DG +P +A G +++ LF AL A + Sbjct: 558 AKGLEWPVVHVLHLVDGSFPSDMA------------LGTPEGVEEEARLFYVALTRAADE 605 Query: 727 LYISYIGR-------SIQDNSERFPSVLVQE 750 L + R +S S + + Sbjct: 606 LNLYAPLRMPHHRHARDDRHSMAPLSRFLDD 636 >UniRef50_A8RRN8 Putative uncharacterized protein n=4 Tax=Bacteria RepID=A8RRN8_9CLOT Length = 1331 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 76/916 (8%), Positives = 201/916 (21%), Gaps = 176/916 (19%) Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD----GEQDVGNPLLASWGKLGRDYIYL 313 +L + ++ + + + VG+ + + Sbjct: 397 DELSRQYEEILVDEYQDSNYVQEALITSISRERFGYPNVFMVGDVKQSIYRFRLARPELF 456 Query: 314 L-------SDLESSQELDAFVDVTPDNLLHNIQSDILEL--------------ENRAVAG 352 + Q ++ + + +D+ Sbjct: 457 MDKYEKYSRQGGPYQMIELQQNFRSRESVLTSVNDVFYQIMTKNLGGITYTPETALYPGA 516 Query: 353 VNIEEFSRSDNKRPLDPLD------SSITFHV-------------------------CHS 381 V E ++ L+ + ++F + Sbjct: 517 VFEEVNRKTVCGPGLEEGESDTQESGPVSFLAGTPTELLMVDTGAEALKQLDEDSLDYTA 576 Query: 382 PQREVEVLHDRLLAMLEEDPTL-------------TPRDIIVMVADIDSYSPFIQAVFGS 428 + E ++ R+ ++ + + D+++++ + + VF + Sbjct: 577 KELEARLIAGRIRQLVSQGQGILVWDKSRGAYRRARYGDVVILLRSMTGW----SEVFVN 632 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + +P R + +E +SLLS+ D+ + A++ P++ + Sbjct: 633 VLMNEGIPAFAQTRTGYFNTVEVETVLSLLSVVDNPMQDIPLAAVMRSPIVGMDDEEMAW 692 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYA------------ 536 + ++ + R + E P + + R G Sbjct: 693 MMAAYKRNSQKGQDRGVYGAWRLWLEEGPVPEEELEQEEGLRPGEGPGPEEEPEQEEGLG 752 Query: 537 ---------MESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 + +V + + L + + R E Sbjct: 753 PGKGPGPEENPDREEGLITVGLCSIPAEAAHSISLKSLKLSLLMERLRGEARHLPIHELL 812 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 V ++ ++ A Y ++L + Sbjct: 813 YRVYKESGYYDYVSAMPAGETRRANLDMLVEKAAAYESTSYKGLFHFVRYIEKLKKFDTD 872 Query: 648 --ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 E V I ++ + + F VV L G+ + +Q A L + D Sbjct: 873 FGEASVAGEQDNTVRIMSIHKSKGLEFPVVFLAGLG-KRFNKQDAYGQILLDADLGAAAD 931 Query: 706 RSRRD-----------------------DDRYLFLEALISAQQKLYISYIGRSIQDN--- 739 + ++ + A+ A++KL ++ +S+++ Sbjct: 932 FLDLELRVKAPTLKKQALKRRLELETMGEELRVLYVAMTRAKEKLIMTAADKSLENKLGK 991 Query: 740 -------SERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ 792 + P ++ + E L + Sbjct: 992 WKDIPLSQGQLPYTILASANSCLDWLLMAQPAIPAAHMEMRQIQVKDLIGEEITRQIIRK 1051 Query: 793 NYQPGERQSYAREWLPAASQAGKA---HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 + AA E+ L V + L++ Sbjct: 1052 MKKEDLLNLDGERVYDAAFGTHLRKVLEYEYPYESDTGLYAMVSVSELKKQSQIGRAEDA 1111 Query: 850 ----------------------QMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNA 887 Q FR + + G R +L Sbjct: 1112 IGTDRDNLEGAALGELTALRGKQDVAGSGFRESGEQNKPSSSGPNRGALRGTAYHAVLEH 1171 Query: 888 LVE---------QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG 938 + + + L + + W + + A + Sbjct: 1172 IRFHEIHSLSEVKPVVDELLENGFLDQEARDFINPNVIWNFLSSSLGTRMAKAQAEGRIH 1231 Query: 939 QSMEI-------DLACNG----VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVY 987 + + ++ V I G + + + E Sbjct: 1232 KEQQFIIGIPAREMGLGDSDELVLIQGIIDAYLEEEDGLVLI-DYKTDHVPEGSPEQGEK 1290 Query: 988 CASGGNGESRLFLRKD 1003 + + + Sbjct: 1291 MLAERYRVQLDYYERA 1306 >UniRef50_C4FGD5 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FGD5_9BIFI Length = 1288 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 54/498 (10%), Positives = 119/498 (23%), Gaps = 38/498 (7%) Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 ++A A + + + Y + P+ A+ R ++ + + Sbjct: 256 VEAYAAEKRRLNMAEFSDFTIAAYQLVTRFPSIGARYRKRFSHVLLDEYQDTSTTQAALI 315 Query: 284 GQLF--NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD 341 LF VG+P + + G + L ++ Sbjct: 316 ATLFRGEGTAVSAVGDPFQSIYAWRGASPGA-FRMFQRDFHLPPERKPYSLSVTRRNAKL 374 Query: 342 ILELENR----------AVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHD 391 +LE N + + E ++ + ++ + +E++ + Sbjct: 375 VLEAANNLTMPLRGTPSRPSSSPMREVDVNELAPLDNAPSGTVGVLGYETLGQEIDGVVR 434 Query: 392 RLLAMLEED-----PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQ 446 + + + V+ +F A L A Sbjct: 435 FCHEAIARNTHAGQSGEHKGSVAVLFRSKAK-----MPLFQQALEQSGLSAVAVGYSAML 489 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 P + +SLL + S ++ LL P ES R + Sbjct: 490 ERPEVRDILSLLRVACDHSDSASLMRLLATPRFGLGATALAALAGIANTLNLESQYRALV 549 Query: 507 DDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS 566 V R ++ + + S + + Sbjct: 550 MAGLVPADAPRGQWDALVREHRDSVINSVFVADLLLRDDLPEQLERCSRIDEHDARTIIR 609 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM-------------TLIE 613 L + RPL + + L I Sbjct: 610 AGAVLRTVCDAIG--RPLSDVVRTATQALELDVDAVVAQALHGDGTVNPTVARIPVEAII 667 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 ++E Q D L D+ V + T+ + + + Sbjct: 668 DLVDTYLSEIAAGQAPTLRGFMAWTDTLRTIEDETSTLNADSGADVELMTIHQSKGLEWD 727 Query: 674 VVCLLGMNDGVYPRQLAP 691 V ++ + +GV+P + Sbjct: 728 AVAVVELGEGVFPSKQGD 745 Score = 50.7 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 44/142 (30%), Gaps = 9/142 (6%) Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER------- 742 A L + + R D+R L AL A++ L ++Y + R Sbjct: 837 AMDPDSLYLTQVEEYGRRYHCDERRLAYVALTRARRDLLLTYCQTGEEGRDPRVLGAKTR 896 Query: 743 --FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQ 800 PSV QE+ D + + + + + ++ ++ + ++ G Sbjct: 897 KSKPSVFWQEVHDSLRIHNDIATTPSNLPEGADEQIALPEGYFVGDHAREYEDMVVGAAW 956 Query: 801 SYAREWLPAASQAGKAHSEFVQ 822 E A + + Sbjct: 957 LEEPETHDAQTSLPWPARLSRE 978 Score = 42.6 bits (98), Expect = 0.084, Method: Composition-based stats. Identities = 17/171 (9%), Positives = 34/171 (19%), Gaps = 21/171 (12%) Query: 874 GLSRYQINQQLLNALVEQDDAERLFR----RFRAAGDLPYGAFGEIFWETQCQEMQQLA- 928 S + E + + + ++LA Sbjct: 1097 AASAGTRFHAWAERFMNAMHPEESGESRSGMLQELDKAVQACQSGDADSSVLEWERRLAS 1156 Query: 929 DRVIACRQPGQSMEIDLACNGV---QITGWLPQVQ------PDGLLRWRPSLLSVAQGMQ 979 +I ++ + + G L V D R+ Sbjct: 1157 SAWAQRVPVWAERQIVVSIGDLNGQVVNGKLDAVFFGGLDPQDRTKRFTIVDWKTGHRPT 1216 Query: 980 LWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAA-----EQALHYLSQLIE 1025 + RL L + + A +A L +L Sbjct: 1217 SSED--TARKLLQLDMYRLLLAEIENVPLEAIDATLYYVSEADESLRELHA 1265 >UniRef50_A5ZW44 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZW44_9FIRM Length = 1233 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 96/983 (9%), Positives = 218/983 (22%), Gaps = 190/983 (19%) Query: 132 ADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAP-LWKALVEYTHQLGQPR-WHRANL 189 ++L + R + + A LW L E + Sbjct: 274 SELLKNHKYARLSTKKDLSVDEEKKIQVKDLRDSAKGLWNELTEKYFNQTEEMILEYLQY 333 Query: 190 YQRFIETLESAT-TCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYW 248 +R +E L T R I + AL L + P W Sbjct: 334 CRRPMEGLAEVTLQYKDAFADRKREQNILDFTDMEHFALDILMHKEGDTI---TPSAAAW 390 Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG----EQDVGNPLLASWG 304 L R ++ + + VG+ + + Sbjct: 391 E----------LSARYDEVMVDEYQDSNLVQEMITNLVAGWADKRKNIFMVGDVKQSIYR 440 Query: 305 KLGRDYIYLLSDL-------ESSQELDAFVDVTP-DNLLHNIQSDILEL----------- 345 + Q +D + +L ++ ++ Sbjct: 441 FRLARPELFMEKYHSYSLEDSEEQRIDLHKNFRSRGTVLSSVNYLFRQIMGEDLGGITYE 500 Query: 346 -ENRAVAGVNIEEFSRSDNKRP----LDPLDSSITFHVCHSPQR-EVEVLHDRLLAMLEE 399 EN G + E + ++ + + Q E + R+ ++ Sbjct: 501 DENALYTGASFPERADGKEPETEVLLIEKDGEELEEQGNQTVQELEALAIAQRIQKLVGI 560 Query: 400 DPTLT----------PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 + L DI++++ ++ F A + +P + R + Sbjct: 561 EEVLDKDSGTYRKAGYGDIVILLRTSAGWA----EPFSQVLASKGIPVYTASRTGYFAAQ 616 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 + ++ L + D+ + +L A + L +R + + + Sbjct: 617 EVVTLLNYLRICDNPMQDIPLTGVLHS----AIGGCNTQELAIIRSKCPDGMLYESLLAF 672 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 R+ + + R ++ + Sbjct: 673 RERKTDDRDEEELVLRE------------------------------------KISHFIE 696 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 L R E + R ++ A E Y Sbjct: 697 LLEEMRDLAVYTPVHELIQYILRKTGYGDYVRVIPGGAQRGANLHMLVEKAMEYEKTSYR 756 Query: 630 DAVPLSLLRDELA--QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN------ 681 ++L + E G V I T+ + + F +V GM Sbjct: 757 GLFNFVRYIEKLQKYEVDFGEVNLADAGNGAVQIMTIHKSKGLEFPIVFAAGMGKQFNFQ 816 Query: 682 ----------------DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQ 725 D + P + L ++ R ++ + AL A++ Sbjct: 817 DINSRFLIHPDMGFGVDVILPEKRLILSTVHKQIIRRQLKRESLGEELRVLYVALTRAKE 876 Query: 726 KLYISYIGRSIQD-----------NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEA 774 KL I+ + D P + Sbjct: 877 KLIITGTIAKLADVLQAVSWQMGRRETLLP----IGTRGEARNYWSFILPALARHEAMLP 932 Query: 775 RVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPL 834 + + + ++ + ++ A E + + L + Sbjct: 933 LFREYGIADRQIQVCEMEHAEFKVQKITAAELVQGEILGQTDSQMQEKLLKEWDSRKIYD 992 Query: 835 ETLQRFW--AHPVRAFFQMR-----------LQVNFRTEDSEIPDT-------------- 867 E + R F+ L+ + E ++ Sbjct: 993 EEIHEILTERFAFRYPFEYLKDLPVKVSVSELKKRSWRGEEEKEESLFYEPDIQEIIPTF 1052 Query: 868 ---EPFILEGLSRYQINQQLLN--ALVEQDDAERLFRRFRAAGDLP-------------- 908 E G +R +L+ +D ++ ++ R D Sbjct: 1053 VSGEKEEYRGAARGTAYHRLMECLDYTHAEDVHQIQKQIRMLTDSRKMSPEEAQCIRIAD 1112 Query: 909 -YGAFGEIFWETQCQEMQQ---LADRVIACRQPGQSMEIDLACNGVQI-TGWLPQVQPDG 963 + +Q ++ Q +E + G + + Sbjct: 1113 ILAFVDSKLGQRMKTAAEQNALYREQPFVIAQKMNQIEAAWNGEETVLVQGIIDAYFIED 1172 Query: 964 LLRWRPSLLSVAQGMQLWLEHLV 986 + + L+ Sbjct: 1173 DEIVLV-DYKTDKVSPGGEQDLI 1194 >UniRef50_A6L5X5 Putative uncharacterized protein n=19 Tax=Bacteroides RepID=A6L5X5_BACV8 Length = 959 Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 107/1049 (10%), Positives = 251/1049 (23%), Gaps = 210/1049 (20%) Query: 69 IWDMFVRVLPEIPKESAFNKQSMSWKLM-TLLPQLLEREDFTLLRHYLTDDSDKRKLFQL 127 D++ + + + L Q E ++ +++ +++ Sbjct: 9 AADLYKHTEGNLAHTAVVFPNKRAGLFFNEYLAQESESPIWSPAYVSISELFRSLSPWEV 68 Query: 128 SSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRA 187 + + Y ++R E L + W L + + Sbjct: 69 GDPVKLVCELYKIFR-------RETQSTETLDDFYFWGEMLISDFDDADKNKVDTDKLFS 121 Query: 188 NLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRY- 246 NL R + + + +A++ ++ I R+ Sbjct: 122 NLQDL-----------------RNIMDDYTFIDDEQEEAIRQFFQNFSIERRTALKERFI 164 Query: 247 -YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGK 305 W + + + + ++E + + +L + Sbjct: 165 SLWDVLGNIYKGFRESLASQNIAYEGMMYRHVIEHLDVDKLPYEK------------YVF 212 Query: 306 LGRDYIY-----LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 +G + + L + L+ + + + D + N Q+ E + Sbjct: 213 VGFNVLNKVEHTLFTQLKDAGKAVFYWDYDEFYMKENRQAVTHEAGEFIRRNLRDFPSPL 272 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 S + + + + L + L ++ V++ + P Sbjct: 273 SGELFKNLSKPKEVHYIASSTENAQARYLPQWIRNNLTTPE----KETAVVLCNEALLQP 328 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 + ++ I+ PV I+LL L F + V Sbjct: 329 VLHSLPAEVK-----HVNITMGFPLSQTPVYSFLIALLELHTHGFNFKSGRYTFQSVVTL 383 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 + T +E Sbjct: 384 LKHPYT-----------------------------------------RQLTGQAELLEKE 402 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 P G L L LN+ R + + Sbjct: 403 LTRNNRFYPLPGELGKDEFLTRLFTPLSGNLNLCIRLSETLQQVAGIYQANTSGTEDTDA 462 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS-QRFLAGPV 659 + ++ + V R L + L I A + Sbjct: 463 FNQLYRESLFKAYTTINRFRTLIEEDEL--TVQSETFRRLLVKVLSATNIPFHGEPAIGM 520 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD---RSRRDDDRYLF 716 + ++ R++ F+ + LL +N+G P+ F + + G + Y F Sbjct: 521 QVMGVLETRNLDFRHLVLLSVNEGQLPKSGGDSSFIPYNLRKAFGMTTIEHKIAVYAYYF 580 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 L A +++ + Y S N S + + + Sbjct: 581 YRLLQRA-ERITLMYNTSSDGLNRG-EWSRFMLQFL------------------------ 614 Query: 777 KAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLET 836 + P Q + G+ + + + + Sbjct: 615 ------IEWPHPITRQFLEAGQSPQGTSPITVEKTPDVMRRMQSLFDVRANPKAKFSPSA 668 Query: 837 LQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ----- 891 L + P++ +++ ++ E S D+ F I + + Sbjct: 669 LNYYLDCPLKFYYRYVAGLSAPDEVSAEIDSATF-------GSIFHYAAEHIYKDLTTHG 721 Query: 892 -----DDAERLFRRFRAAGDLPYGAFGEIFW------------------ETQCQEMQQLA 928 + E L R D AF ++F+ + ++QL Sbjct: 722 KVINKEALETLLRNEVKLQDYVDTAFKKLFFNVPQNEKPEYNGVQLINSAVIARYLKQLL 781 Query: 929 D---RVIACRQPGQSMEIDLACN--------GVQITGWLPQVQPDGLLRWRPSLLSVA-- 975 R ME+D + +I G + ++ R Sbjct: 782 QNDLRYAPFTFIASEMEVDEPIDIQTPKGVIKSRIGGIIDRMDS-KDGTLRIVDYKTGGD 840 Query: 976 --------------QGMQLWLEHLVYCAS--------GGNGESRLFLRKDGEWRFPPL-- 1011 + ++ A+ + L++ + + P+ Sbjct: 841 ADTPPHVESLFIPDKKRSNYVFQTFLYAAIMCRKQPTMKIAPALLYIHRAATETYSPVIQ 900 Query: 1012 -----AAEQALHYLSQLIEGYREGMSAPL 1035 ++A+ S+ + YRE + L Sbjct: 901 MGEPRKPKEAVEDFSKYEKEYRERLQGLL 929 >UniRef50_C7RHW7 UvrD/REP helicase n=4 Tax=Anaerococcus RepID=C7RHW7_ANAPD Length = 597 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 43/508 (8%), Positives = 141/508 (27%), Gaps = 102/508 (20%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYI 311 DP L + + R ++ + + ++ + V + + + + Sbjct: 187 DPRLLNSIRKKYRYIQVDEGQDTSLIQFKIIEKIVAPLNNLMIVADDDQSIYSFRAANVS 246 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILE---LENRAVAGVNIEEFSRSDNKRPLD 368 YLL+ P+ + + + + N + A ++I + + + Sbjct: 247 YLLNLKSK----------YPNLKIIEMTENHRSSKKIVNLSKAFIDINQDRYPKDLFTKN 296 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 I+ + + + + + + M +E+ ++ + I + Sbjct: 297 DFWGQISIKSLRNVRDQYKFI---IENMNQEEKN------AILFRNNIQALNIISFLMED 347 Query: 429 APADRYLPYAIS-DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + ++++ +++ +++ D + L + + Sbjct: 348 E-----IDFSVNISSLNFFESKIIDDLFNIIEFS----DDFDRIDLFCEIYYKIGTFLKK 398 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 E + L + + + ++ + + Q Sbjct: 399 EEVDKLSHKALNKNVFEALYEMDLEDY------------------------KIETLIQKE 434 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 L + M + +++ E Sbjct: 435 KQLKHIRKLSLDKKISYIYKYMDYKSYISNFSKKYREEVVNKDLF-------------IE 481 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 +M + ++I +D+L ++L R + + T+ Sbjct: 482 SMVNFTKNLESIEDFYSK------------KDKLEKKLSSSRSNLI-------LSTIHKS 522 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + + V ++ M +P + + +++R + A+ A++ L Sbjct: 523 KGLEYDNVFVINMVKNEFPIIVDNEDIVN-----------KIEEERRVMYVAMTRAKKNL 571 Query: 728 YISYIGRSIQDNSERFPSVLVQELIDYI 755 +I I + + PS+ ++ D + Sbjct: 572 HILTIKKRGS--EKLSPSIFFTQIKDLL 597 >UniRef50_A3VPE1 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VPE1_9PROT Length = 1015 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 86/861 (9%), Positives = 191/861 (22%), Gaps = 128/861 (14%) Query: 172 LVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALG 231 L + RA + E L + P+ + G L + + AL Sbjct: 170 LSALLSMTPEDLAGRAADHWH--EHLRFLSILAEAWPAILSKQGCIELSDRQTRLMTALA 227 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 H + + A A T S + Sbjct: 228 DH-------LSATPDGPPILIAGALGATEATAHLMESVAKSPRGAVILPGAMPMAADQST 280 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE--NRA 349 +P + L + +D L L Sbjct: 281 LLPPSHP--------QAAFQRWLRRVGGGASVDLSPWDERMTDRKQATRAFLSLALTPAE 332 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 G F+ + LD + ++F +P E + + L +LE + Sbjct: 333 ETGDWHRRFADFRDAYSLDEALAPLSFATAGTPNEEADFVALLLREVLETEGKTAL---- 388 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 ++ D D + + + S + Sbjct: 389 LVTPDRD-----LARRVCAKLRQWDIRLDDSGGTPLYGAYRGTYIRQWAHWLGAPDDPVA 443 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 + AL+ + +++ + L W+ Sbjct: 444 LAALVAHGLFLRGLTRSDKE-----------------RLARRVDRRLRGMRPRDWQDTQR 486 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 R+ Q + + L +L+ + + R ++ L Sbjct: 487 RLAGEGPSPLETELLQDLDAALRAFQAATTQHERLRALIEIADRFARSADGDQLL----- 541 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 + A ++ + + P + L Sbjct: 542 ------------------WQDQDGEALAAQLSAMMQTAFLPDCPPAAFASLFEALLGSAV 583 Query: 650 ISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR 709 I + + L+ R V L G+ +G +P+ F + + G + Sbjct: 584 IRTYGTHPRLTVLGLVEARLQSADRVILAGLTEGTWPKLTTADPFLPHNVRLALGLPTHD 643 Query: 710 DDDRYLFLEALISA-QQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 + L+ + A +++ + +S + PS + L + I + + Sbjct: 644 AEVGRSALDFVDHALGEEVILIRSEKSDRG--PALPSRWLTRLYNLIEAAKQTEATDITG 701 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTL 828 H + A +P L Sbjct: 702 RLRGWVGALRHPASVDP------------------------------ALPPMPRPAAALL 731 Query: 829 PETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL 888 P + + + + P + + L++ ++ P R + + L Sbjct: 732 PARLSVSDIGQLIRDPYSVYARRLLRLFPLDPLAQEPAE-------RERGTLFHAVYERL 784 Query: 889 VE---QDDAERLFRRFRAAG----------DLPYGAFGEIFWETQCQEMQQLADRVIACR 935 + + +F A Y G+ + Q Sbjct: 785 AKVAPDRVTQEVFAHALAETIDDCLYPSECHDLYAMMGQRAGKAFSVISQTQRRDGATAT 844 Query: 936 QPGQSMEIDLACNG--VQITGWLPQVQPDGLLRWRPSLLSVA-----QGMQLWLEHLVYC 988 E+ + G + + G ++ + + + L Sbjct: 845 FAEIEGELTVMAGGRSIDLYGRADRIDLYPDGTYTIIDYKGGSAPTFKQDASFEPQLSVL 904 Query: 989 ASGGNGESRLFLRKDGEWRFP 1009 A LR+ R Sbjct: 905 AMMAAAGGFKDLRRGQVRRLA 925 >UniRef50_C0VQH4 Helicase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VQH4_9CORY Length = 1025 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 103/889 (11%), Positives = 215/889 (24%), Gaps = 151/889 (16%) Query: 139 LVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLE 198 L+ + A + W A +AL + ++ Sbjct: 134 LMTGAEQDAVIRELLKGNQEAGGEYWPAERVEAL--DYVGFARGLRDFLLRAGERGKSAA 191 Query: 199 SATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLA 258 +++ + L H+ L R +PA L Sbjct: 192 DVKKLGEQENKPLWVAAGAFLEEYTAVMNLQQMHHLNASELLITAVRALED---NPALLE 248 Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVG-NPLLASWGKLGRDYIYLLSDL 317 K+ R + ++ + + + VG N + G + Sbjct: 249 KMRNRYDFLAVDNAQHLDPLSQKLVEMIGEHTPIFVVGGNTNGLVYSFRGANT------- 301 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFH 377 V+ + ++ ++ Sbjct: 302 -------DLVEDKSGKTVITLEQSFRRPSDK--------------------------RII 328 Query: 378 VCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 H+ V+ L + + D++V+ + P +Q +A ++ Sbjct: 329 YTHTAGDNFSVIARELRE-VHLIRDIPWEDMVVITRSLSQI-PALQRALATADVPVHID- 385 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 S +++A + + + ED++ L P+ A LR +++ + Sbjct: 386 --STDVVLVEQSIVQAMLQAVDIVMGNGTEEDIIELATGPIGGA----DPITLRRIQREI 439 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 E G + E + L Sbjct: 440 GELG----------------------------------------PVVRGAAGVAEDARLG 459 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM-------LNAFFLPDAETEAAMT 610 + L L + R + + LE L + + A Sbjct: 460 EQAESVLTHLSAVIQTGREAVERGDSLELILWSIWEATGLSTSKMYTALRGGPAAAQANR 519 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL--AQRLDQERISQRFLAGPVNICTLMPMR 668 + + G + L + L R Q V + T Sbjct: 520 DLNAMMELFDVAGDYVERVKQPSLEGFIEHLTSQDLPTGVRERQVVAPKAVALLTAHGAI 579 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD------------RSRRDDDRYLF 716 + V L G +D +P + D R R +++ LF Sbjct: 580 DDEWNTVILAGADDDSWPSLGLTGTIFDQEELVDLIDENVDPDAYIDRLRERLHEEQRLF 639 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY----IGQSHYLPGDEALNCDES 772 A L I+ I + +D+ PS V++L + + + Sbjct: 640 SLVTSRATDTLVITAINPAEEDSPLPQPSRFVRKLEEDETFSVSTVVETDELAVKSSRPF 699 Query: 773 EARVKAHLTCLHTRMPFDPQNYQPGERQSYA--REWLPAASQAGKAHSEFVQPLPFTLPE 830 A ++ LT + + + A E P ++ P Sbjct: 700 IAELRRALTSADSSDEEKEEAADLLAMLADAGFSEAEPTNWWGLAGPTDAQPLREPGQPA 759 Query: 831 TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNA--- 887 T+ ++ P++ T L + L A Sbjct: 760 TLSPSQVESGLQCPLKMVLNSV--------------TPTESSSALREGNLLHALAEASVT 805 Query: 888 ----LVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRV--IACRQPGQSM 941 +AE+L + + E + M ++ +A G + Sbjct: 806 LQQDEETWKEAEQLVLDAYLSSRTVPPWKEKADEEEFVEVMNATVSKMTNLAGDLVGVEI 865 Query: 942 EIDLACN------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 +D+ ++I G L +V D R + L + + E Sbjct: 866 PMDVTVGQLDDGSPIRIKGRLDRVHRDSEGRMKVYDLKTGRSAPTYQEA 914 >UniRef50_Q5KJH7 ATP-dependent DNA helicase pcra, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KJH7_CRYNE Length = 982 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 44/416 (10%), Positives = 113/416 (27%), Gaps = 62/416 (14%) Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYL 313 +++ R ++ + E + + G VG+P + +G + L Sbjct: 221 KEAPRVVENIRHILVDEFQDTNTTQYELLKRFAKAHKGVSVVGDPDQSIYGWRSAEIENL 280 Query: 314 ---LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 D + + + + + A A V+ + + P Sbjct: 281 NKMTKDFPGVEAIYLEENYRSTG----------SILDAAHAIVSQDRQRIQKSLFTSHPK 330 Query: 371 DSSITFHVCHSPQREVEVLHDRLLAMLEEDPT-LTPRDIIVMVADIDSYSPFIQAVFGSA 429 + +T V +P E + + ++ L D +++ + V S+ Sbjct: 331 SAPVTLKVFSTPVIEASFISTEIKRLIAYSGGLLRYDDFAILLRYNA-----LSRVIESS 385 Query: 430 PADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEG 489 +P I ++ ++ L L D+ + + +++VP Sbjct: 386 LQKDSIPNRIVGGHKFFERMEIKDLLAYLQLADNPGFNPAFVRVVNVP------------ 433 Query: 490 LRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLP 549 R D L + + + R+ G + Sbjct: 434 ------------KRSIGDKTLTDILSTAKSMKISPMQLCERVTDGEGIP----------- 470 Query: 550 YDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAM 609 + + + LA+ + + RR + + + + + +N ++ Sbjct: 471 ----ANIKPGVKKSLANFVGVIRKLRRAAEGGASVADLIKMVIEKVNYEDYLRT-SQPDW 525 Query: 610 TLIEQQWQAIIAEGLGAQ--YGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 + + +++ VPL +L Q S + Sbjct: 526 DSRWENVKELVSSPPTFLLFLHHRVPLWPWLTDLENGNSQISYSVTVAEEQARLSG 581 Score = 73.8 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 60/236 (25%), Gaps = 32/236 (13%) Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 E L + PL+ D E V I T+ + + + VV + + Sbjct: 682 ESLANAPDNLTPLAYFLQTSMLSTDTESGQDDASTPKVTIMTVHAAKGLEWPVVFIPAVE 741 Query: 682 DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 G +P + ++R L A+ AQ L+ + ++N E Sbjct: 742 QGTFPSYRC-------------TEPHEIAEERRLLYVAMTRAQSFLF--RMMGGEENNKE 786 Query: 742 -------------RFPSVLVQE-LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRM 787 + S ++ + D + S + Sbjct: 787 ATTDQPNVDTVVRKHMSAMLCRPMPDEDLTKDMIMKHVRAAPPLSTWDPPERSSWGEKIN 846 Query: 788 PFDPQN---YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF 840 F ++ + P A+ + P + +P F Sbjct: 847 RFARRDVTKAARATEYWASDVDEPPAALPMAPQKKPPPPSVKSANRHIPPTMPFTF 902 >UniRef50_D0WNM3 ATP-dependent DNA helicase n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WNM3_9ACTO Length = 1158 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 96/840 (11%), Positives = 199/840 (23%), Gaps = 121/840 (14%) Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQL----FNSDGEQDVGNPLLASWGKLGRDY 310 + +R R ++ + + + VG+P A +G G Sbjct: 294 RIGEETASRHRLVLLDEYQDTSVSQAVFLRRALGGAGEGRSVCAVGDPNQAIYGWRGAS- 352 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 L+D + +A V + + IL+ N A ++ K Sbjct: 353 ANALADFAVAFAGEAPVRRLTLSTSFRSDAAILDAANAVAAPLDEAAAGVRKLKARPGCG 412 Query: 371 DSSITFHVCHSPQREVEVLHDR---LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + + + R + A + P +I V+ S Sbjct: 413 PGRVVEARPLFAEDSYRAIARRVEDVQAEVARTRAAQP-EIAVLCRKRSSI-----ERVA 466 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A +R + Y I + P + + L + ++ LL + + Sbjct: 467 DALRERGIAYEIVGGESLIERPEIVTVRAALGVLARPSHGGLLVRLLLH------WGVGS 520 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + +R LR+W E R D E + + + + Sbjct: 521 DAMRALREWSWELARRSVGDAPLDPRAEAGLVEAVSRLPDPEWVGSRGLALDSAAFDRLS 580 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 L + L + + LA L+ + E R L++F A Sbjct: 581 LVSKSLASLRSSVHLPLADLVEKCISQLGLDLAAASRAEGSQRVRTSLDSFVALARGYSA 640 Query: 608 AMTLI-EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 + + + +YG + AG V I T+ Sbjct: 641 VHPGASVRDFVDWLDLVERHEYGGE----------EEAGIDASEEVEVHAGVVQILTVHA 690 Query: 667 MRSIPF-KVVCLLGMNDGVYPRQLAPLGFDLMSQ---KPKRGDRSRR------------- 709 + + + +V + M + + + + P R DR+ Sbjct: 691 AKGLEWRDLVAIPEMVSTQFSEKESGKSWTTDPSVFPFPLRADRAHLPRFRPSDFSEKLD 750 Query: 710 ------------------DDDRYLFLEALISAQQKLYISYIGRSIQDNSE---------- 741 + R L A Q +L+++ G + ++ Sbjct: 751 AALAYSRFLRADIPAHENAEARRLAYVAFTRPQAELFLAGYGLAAKEIPPSFVEGDAVSL 810 Query: 742 RFPSVLV-----------------QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH 784 SV + E + + A + + + + + Sbjct: 811 LPRSVFLDDVRKGAGVLPAADVAGPEWPPELTEECPATMPLAEATERTGGPPEPVIDYAN 870 Query: 785 TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHP 844 +P P + + + E P + L R Sbjct: 871 ADLPLWPADVVRAGPGAGHASEPGGSGGGSGDSGESPAPPERVAMWRRSADLLIREREAA 930 Query: 845 VRAFFQMRLQVNFRTEDSEIPDTEPFIL-----------EGLSRYQINQQLLNALVEQDD 893 R R V D F+ + + Sbjct: 931 SRPAVPERPYVTATDVVHLNEDPAAFLAQWRRPTPQRPSRAARTGTEVHSRIAEFY-ERP 989 Query: 894 AERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQL-ADRVIACRQPGQSMEIDLACNGVQI 952 A A G+ P + E + + ++ A R + G + Sbjct: 990 ARLDIDSVMAQGEQPVDM-DVLTREEEARLLEAFRASRWARMPAIAVEESLSAVIGGRVV 1048 Query: 953 TGWLPQVQPDGLL----RWRPSLLSVAQGM----------QLWLEHLVYCASGGNGESRL 998 + V + QL + L + + G + + Sbjct: 1049 RCTIDAVLDTSAEPGLSEATIVDWKTGRRPDGEALASRELQLAIYRLAWARAHGRDIADV 1108 >UniRef50_B8IZF9 UvrD/REP helicase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IZF9_DESDA Length = 1173 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 101/858 (11%), Positives = 193/858 (22%), Gaps = 146/858 (17%) Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-----G 291 L+ GD P L +L R + ++ + L Sbjct: 371 LLVPHMAHEVLSGDHGVPETLCRLGARLTHYLVDEFQDTSQEQWRALRPLVEEALSRGGS 430 Query: 292 EQDVGNPLLASWGKLGRD---YIYLLSD------LESSQELDAFVDVTPDNLLHNIQSDI 342 VG+ + +G D + +L D ++ + + + + Sbjct: 431 LTWVGDVKQSIYGWRDGDPELFDGILEDKGLAAVAATTARDSLPFNWRSRRQVVEHNNAL 490 Query: 343 LELEN---------------------------RAVAGVNIEEFSRSDNKRPLDPLDSSIT 375 L +V + P + Sbjct: 491 FSLLEQADTARAVMSALLPGDMPEDLSAEIMDASVKSLLGAFAGTRQECPEHTPDGGLVQ 550 Query: 376 F--HVCHSPQREVEVLHDRLLAMLEED--PTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 S + E + DRL +L +D P D++V+V D + Sbjct: 551 VEDIAADSSEMLREAVFDRLGRILLDDVAPQRPWSDVLVLVRSNDGAARI-----ADHLV 605 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +P + +HP++ ++LL+ DS + +L +L + Sbjct: 606 RLGIPVITENSLLLSAHPLIVQTVALLAFLDSPDDNIALLTVLTGEIFHG---------- 655 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYD 551 + EL T H W + L + Sbjct: 656 ------------------HPEAAELAHTDLHGWCARQKKGFLYQSFRQ------------ 685 Query: 552 ESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL 611 SLL + + EW + E Sbjct: 686 -------RWPHVWQSLLAPFFSQSGLMTPYDTVLEWYARLQV------------EQRFPE 726 Query: 612 IEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIP 671 + + A+ LS + + +E++ V + T+ + + Sbjct: 727 AATFLRRFMEVLHSAEEKGLATLSTFLEHWNAKSQEEKVPMPENMNAVRVMTVHKSKGLE 786 Query: 672 FKVVCLL----GMNDGVYPRQLAPLGFDLMSQKPKRGDR---SRRDDDRY----LFLEAL 720 VV + ++ P + G +M + K R L A Sbjct: 787 APVVFVPFTALNISASDKPLRTNRQGLSMMVRNQKALGRPYYEDLARQARESLNLLYVAF 846 Query: 721 ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL 780 A+ LYI S + S + + + + L + A + Sbjct: 847 TRARDALYIF--RTSAKRQSPVLAGLDILWERAGLQPPYALGSLPTAADTSRGSHAHAAI 904 Query: 781 TCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHS-----EFVQPLPFTLPETVPLE 835 P + G + A P P P + Sbjct: 905 GADVDTDCALPASPAGGRPANPAPAPTPGLQHVDGTAGAPGILPAAAPAISRTPSVGADQ 964 Query: 836 TLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE 895 F A R F + R + L L Sbjct: 965 EYDAFSPDTADAAEDWRPMQWLPRLKIFRNPMAAFDFQPEDRGNLLHFCLEHLRLTGSPR 1024 Query: 896 RLFRRFRAAGDLPYG---AFGEIFWETQCQEMQQLADRVIACRQ---PGQSMEIDLACNG 949 + G Y + + A + + R I A Sbjct: 1025 EDAQAALNFGLRHYPLPVPDDAALRHGAFEALHWFASQPQSARWLANGWPEHSIMTAQGQ 1084 Query: 950 VQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH--------LVYCASGGNGESRLFLR 1001 + + + + R Q +E L+ + L + Sbjct: 1085 LL---RMDLLVHEPWGRL-VIDYKSGQPEAAHVEQVRRYLGGLLLERENANTPVMGLLVY 1140 Query: 1002 KDGEWRFPPLAAEQALHY 1019 D RF + + A Sbjct: 1141 LDQR-RFRLVTPDGASEL 1157 >UniRef50_C9KJP8 ATP-dependent nuclease subunit A n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJP8_9FIRM Length = 1283 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 104/1004 (10%), Positives = 226/1004 (22%), Gaps = 207/1004 (20%) Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHR 186 L+ K A +D W G E L +A ++ + ++ R Sbjct: 286 LAEKKAGGWDALCAAAKGWKQPVLRGKKYEALRDAFPDIRKAFEKSRDEAKKIFTDARDR 345 Query: 187 ANLYQRFIETLESATTCPPGLPSRV-----FICGISALPPVYLQALQ-------ALGKHI 234 L + LE C + V FI + A L AL Sbjct: 346 -YLAEMEASVLEDIRACSATVRRYVDLTTAFIDALQA-AKKERNVLDFSDLEHFALAVLC 403 Query: 235 EIHLLFTNPCRYYW----GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD 290 + G L + ++ + + +D Sbjct: 404 RDSEALAGASEADFRGERGKALRTDAAEDLREKYAVIMVDEYQDTNGVQEAILNLIARAD 463 Query: 291 GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAV 350 VG+ + + D + ++ E D+ L ++ + Sbjct: 464 NRFTVGDVKQSIYRFRLADPYLFQAKYDAYPENPGAEDMDQ---LITMKQNFRSRAEVLA 520 Query: 351 AGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQRE------------------------- 385 I + + ++ + S + P+ E Sbjct: 521 PINFIFDQVMTREAMEIEYDEKSRLYPGASYPEAEHTLKGPMELDIILRGEPEQPVEGLS 580 Query: 386 --------------------VEVLHDRLLAMLEED-----------PTLTPRDIIVMVAD 414 + + DR+ ++E L RDI V++ Sbjct: 581 QAADAGDETGGEELEGFELEAQHIADRIAGLMESGYRVFDKDAGGYRPLAYRDIAVLLRA 640 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 + + +P + ++LL D+ + A+L Sbjct: 641 VKGKAN----TLLELLRKNSIPAYADVDGGYFEANEVRLVLALLKTIDNARQEIPLAAVL 696 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 P+ T E L LR Sbjct: 697 VSPIGG----FTMEELARLRM--------------------------------------- 713 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 ++ + + + L L A LN WR E + R+ Sbjct: 714 -SVPDEDLFGALLRSHSPETPLEEGLADRAADFCASLNRWRSYAVSHSVPELIWKLYRET 772 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ-- 652 ++ + + AE Y ++L +R +++ Sbjct: 773 GYYDYVGGLKGGLLRQANLRMLADRAAEYEKTNYRGLFRFLRFLEDLRKRDTDLSVARTL 832 Query: 653 RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY-----------------PRQ------- 688 V I ++ + + F VV + + G PR Sbjct: 833 GASEDVVRIMSIHKSKGLEFPVVIVADIAKGFNQLDARGTFLLHKELGIGPRLVERSTVG 892 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP---- 744 R + ++ + A+ A++KL ++ + + + Sbjct: 893 RQMYDTLPYQAIGARIVAETKAEEMRVLYVAMTRAREKLILTGTLAAAKWEKQAARYARS 952 Query: 745 --SV--------------LVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLH---- 784 S + + + + + + A H Sbjct: 953 LDSRELALPDDMIREADSYLDWIAPAVARHTDGAPIREAAGVDWGEMLDAVEPAAHFAVN 1012 Query: 785 --TRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWA 842 + P+ Q + A A + L + + Sbjct: 1013 LLSAEAIQPREEQEELDATLQSVREGRALPASPERELVEKRLSWHYDAEELPGITAKMTV 1072 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPF-----------ILEGLSRYQINQQLLNAL--- 888 ++ F L+ + P P L R + +L L Sbjct: 1073 SEIKQRFAESLREDEPAALPVAPAAPPVWRRPQFLQQKGRLSPAERGTLMHSILQNLDLH 1132 Query: 889 --VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ-QLADRVIACRQPGQSMEIDL 945 + ++ R G + G + + + Q L R+ + + + Sbjct: 1133 GDLTREGLRAQVARMEVTGMIAAGHEDAVNYTSIESFCQSSLGQRMQQAVRVWRELPFSR 1192 Query: 946 AC-------------NGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 + + G + + + + Sbjct: 1193 MIPVGEVNPTYAGSSEKIFVQGVIDVLFEEADGSLILLDYKTDR 1236 >UniRef50_C8P261 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P261_ERYRH Length = 1040 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 54/547 (9%), Positives = 137/547 (25%), Gaps = 109/547 (19%) Query: 219 LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLL-TRQRRHSFEDRELPLF 277 + Y++A +L + ++ +++L+ + + ++ + Sbjct: 340 MTQDYIEAFSSLKEEENCLDFNDFESMALRILNENDGEISELVKHKYKEIMVDEFQDTNE 399 Query: 278 RDSENAGQLFNSDGEQDVGNPLLASWGKLGR--DYIYLLSDLESSQELDAFVDVTPDNLL 335 E ++ + VG+ + + G + + L +++Q L + + Sbjct: 400 YQDEIITKISTGNNIFRVGDIKQSIYRFRGAKPNIMQNLMLDDTTQNLYLSFNYRSKKDI 459 Query: 336 HNIQSDILE---LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHS-------PQRE 385 + + + + + + + D I H Q Sbjct: 460 VEYNNYVFDKLMNLTFGITYDEHDHVNVGIPAQSEDTHPVEIHIIEKHDNRFKKTSDQLR 519 Query: 386 VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 + + ++ + +D++++V S A + +P+ I D+ Sbjct: 520 AQHIAQEIINYHSQ--GYRFKDMVILVRSHASKG-----YLKEAFEEYNIPHYIDDQSGF 572 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 ++ + ++LL+ + VPVL + F + + ++ S IR Sbjct: 573 YKSEIIASVVALLNYATTFHD------FYLVPVLTSPFYNYSDDQIAALKLMDASSIRKA 626 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 + L M+L + + Q ++ ++ L Sbjct: 627 L-----------EIENPELYQSLDDMVLSWRSKDLISIIQEIIQLNDVYNNTLSLQDK-- 673 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 + Sbjct: 674 ---------------------------------------------TNLDFLLEKAIQYQA 688 Query: 626 AQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 E E A V T+ + + F +V L GM G + Sbjct: 689 VSVPTLQGFVRFVAEFKDDTSSEASPLNKDADIVTAMTIHQSKGLQFPIVFLWGM--GRH 746 Query: 686 PRQLAPLGFDLMS-----------------------QKPKRGDRSRRDDDRYLFLEALIS 722 + + D +++ L AL Sbjct: 747 AVRDHSDILLNDDTFGIGLNHVELPMRFVSRNLIRTVMEIKQDNEEIEENLRLLYVALTR 806 Query: 723 AQQKLYI 729 Q+ L + Sbjct: 807 PQKHLIL 813 >UniRef50_P75437 Probable DNA helicase II homolog n=3 Tax=Mycoplasma RepID=UVRD_MYCPN Length = 715 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 59/501 (11%), Positives = 138/501 (27%), Gaps = 92/501 (18%) Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDY 310 KD L K + + ++ + E L + VG+ + G Sbjct: 209 KDHKLLRKWSKKFQYILGDEFQDTNQIQYELIKMLASHHQNLFLVGDNNQMIYRWRGA-V 267 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL 370 ++ L+S ++ + + +IL + N + + +E K L Sbjct: 268 SDIIDSLKSDFKV-RPENEFYITQNYRCDQNILTVANSILGTIYAKENQPDSTKGFLFSA 326 Query: 371 DSSITF---HVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 S S + + + +++ + ++ + +D+ ++ + Sbjct: 327 IKSNRLPVYFQASSVEGQHSWIINKIKNL-HKNHGIQYKDMAILFRTNRNMDSM-----T 380 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A + + Sbjct: 381 EALEADG-SIPLKQNKGFF----------------------------------------- 398 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + L ++ + R D L W L + L + Q++ Sbjct: 399 KQLETFKKVLVALITRSNYDIK------LALKSLRVWPNVLNKSLTVNEQVNLDKILQNL 452 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 + A + +L + +L F + Sbjct: 453 EQAIFLDEHTRGELTEAAKVFTRLIKFVEE-----------QQFEALLAFTFEALNTDQF 501 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 I + Q + E ++ +EL + D+ + S+ +N+ T+ Sbjct: 502 VCNFIFRTLQKLQTE------NKNFTITDFINELRFQQDELKQSK---DNVINLITVHSA 552 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F+ V + G+N +P + DL R D+ LF AL A++ L Sbjct: 553 KGLEFEAVFIYGINQDNFPLKSKNQIIDL----------QRELDELRLFYVALTRAKKYL 602 Query: 728 YISYIGRSIQDNSERFPSVLV 748 ++ + + +PS + Sbjct: 603 FLLSVYQ--MSGEIIYPSKFI 621 >UniRef50_B9Y4V4 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4V4_9FIRM Length = 1076 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 88/876 (10%), Positives = 192/876 (21%), Gaps = 178/876 (20%) Query: 169 WKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQ 228 + AL + + L + R + + L T L +AL YL Sbjct: 300 FNALRKQLNALAKDLVSRTYSEETLLSDLALTYTIIKPL---------TALTLDYLALYA 350 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLA-KLLTRQRRHSFEDRELPLFRDSENAGQLF 287 L + Y + A + R ++ + + + Sbjct: 351 ELKETQGGIDFDDMEHFAYQILTAENKLAAKRYQERFDEIMVDEFQDSNDLQNAIINLIS 410 Query: 288 NSDGEQDVGNPLLASWGKLG------RDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD 341 VG+ + + G RD + + + + ++ + +D Sbjct: 411 RGANVFRVGDVKQSIYRFRGGKPQIMRDLMN--DVRPENCFIHLSSNYRSKQMIVDFNND 468 Query: 342 -ILELENRAVAGVNIEEFSRSDNKRPLDPLDS-SITFHVCHS----PQRE---------- 385 L L N + P D+ + FH + Q E Sbjct: 469 LFLRLMNIPGCSDQYTDHDCVKTGAPAQKQDNYPVEFHALMTKALKEQDEGAENLAANQI 528 Query: 386 -VEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 + + ++L E +D +V+V +++ A +PY I + Sbjct: 529 KAQYIAQQILTRHETSDFRQWKDYVVLVRSHA-----VKSHLKQAFDQAGIPYYIDAKAG 583 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 ++ +S + + + + A+L A +E L L Sbjct: 584 FYQSEAMQILLSWFRILINPADNLSLTAVLSSDFYQA----DDEELARL----------- 628 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 + + E+ H R+ + ++ Sbjct: 629 TLKRERRPIFEILKEEHHPLVADRQRLNDIAQKQGLCALLDALFQIHHFYEEHCTAQQRT 688 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 + + Sbjct: 689 NC-----------------------------------------------DLLRQKAEQYS 701 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCL------- 677 + D++++ E I V + T+ + + F VV Sbjct: 702 AEHSDSLTGFLAMIDQVSEEKTSEAIPVGNEDDVVKVMTIHQSKGLQFPVVFYWASSRID 761 Query: 678 ---------------LGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS 722 +G+ P + + + +++ + AL Sbjct: 762 IMDKKETCIADADLGVGLPALELPWRFKR-PTAIRQAIEYKITLEELEENIRILYVALTR 820 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTC 782 AQ ++ + + + K Sbjct: 821 AQNQMIL--------------------------VDTVKGELPHKPVTMNTLLDRKGTTDL 854 Query: 783 LHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWA 842 + + M ++ E + + S LP T+ ++ Sbjct: 855 ILSAMCESDSHFWKVRTIEDRWEVQQLQRRRKEVVSLPRYTEEKPLPVTLTPSETEQTAY 914 Query: 843 HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFR 902 P + + R + + L E + E L R Sbjct: 915 IPALF-------------------PKSKAVRPAQRGIQLHEAVERLPEGEWTESLIR--- 952 Query: 903 AAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPD 962 L Q L +R + + + I G + V D Sbjct: 953 ---SLLPEIKRADLLLLLQLNKQPLFERCQKMS-VDKELSFAVLSGNEFIQGQMDYVAQD 1008 Query: 963 GLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL 998 + Q +Y L Sbjct: 1009 EN-EVILIDFKSDRHAQADQLKTLYARQISIYLRCL 1043 >UniRef50_UPI0001C41A07 ATP-dependent DNA helicase UvrD/REP family n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41A07 Length = 1546 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 95/794 (11%), Positives = 211/794 (26%), Gaps = 109/794 (13%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFG--IAANIDFPL 64 S + V+ + E+ DP E +I+ S A+ L+ L F I + Sbjct: 38 SGKTRVITER-VRYLVEEKEMDP-ESFLIITFSNKAARELKERLMDYFDVDIINQMQIST 95 Query: 65 PASFIWDMFVRVLPEIPKESAFN------------KQSMSWKLMTLLPQLLEREDFTLLR 112 SF + + + K + ++ + +K + L + ++ Sbjct: 96 VHSFCYKLLIENTNITYKILDDDYGTKKNMFIYKNRERLGFKRESTLTRGKVKDVVAAFD 155 Query: 113 HYLTDDSDKRKLFQLSSKAADLFDQY-----LVYR-----PDWLAQWETGHLVEGLGEAQ 162 Y T D D KL + + + Y YR P + Sbjct: 156 KYSTFDVDTEKLVEWIKENEPVSQDYIDFVNEEYRKTGKFPRKKIDLDKKKKNLKTATDY 215 Query: 163 AWQAP-LWKALVEYTHQLGQPRWHRANLYQRF------IETLESATTCPPGLPSRVFICG 215 A + AL + + + ++ LE P + + + Sbjct: 216 HAYADSWYNALHLQVAKAYPIYKKLLDEHNYLDFNILQVKALEYLKENPETQYTNILVDE 275 Query: 216 ISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELP 275 PV ++ + L K + +P +K + + EL Sbjct: 276 FQDTDPVQIEIFEILMK-----------------NALNPIEKSKDDAEEDCPPISELELD 318 Query: 276 LFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLL 335 S+ VG+ + +G G ++ Sbjct: 319 EAEISDKKIT----SSFTAVGDMDQSIYGFRGA-LENYFEYFDNKYC----------CKK 363 Query: 336 HNIQSDILELENRAVAGVNIEE----FSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHD 391 + + + N R +I + + E + Sbjct: 364 VGLNVNYRSTNEIIEFSEQYIKMQRGKKSRKNLREARKESRNIYYIENEEREMEAASIAK 423 Query: 392 RLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVL 451 + + +E+ D+ V++ + + S I VF +P+ + + ++ + Sbjct: 424 IIKGLKDEEKIKNYNDVAVLLRSVLTSSKDIINVFNDE----NIPFQVKGLQDLENKDEI 479 Query: 452 EAFISLLSLP-DSRFVSEDVLALLDVPVLAARFDITEEGLRYLR--------QWVNESGI 502 ++ ++LL + E + T + + + E Sbjct: 480 KSILTLLHFIIEDDNPQETPIITFWEADWLNLRAFTNADFKQTFIKLSSETEEILIEKQK 539 Query: 503 RWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS----------VLPYDE 552 + + N +L + + + +L E ++ + Y Sbjct: 540 EFEENVFNYAKLIYNDITGNRFTKRSYKGVLELEDEVLDAVFKEYPKPVLTNKTLREYGI 599 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 ++ E L L ++ + + + + + F D + Sbjct: 600 TNEDDLEFFNQLNELKFEIFGDDKDFDERPTILNVYYRILE-ICGFLSEDYIFDPKNKQA 658 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPF 672 + + + VNI T+ + + F Sbjct: 659 LDYIGLFTQIIYEYENIISNRDIRGLYWFLNSNIKNYSYDIENENGVNIMTIHKSKGLEF 718 Query: 673 KVVCLLGMNDGVYPRQLAPLGFDLMS------------QKPKRGDRS----RRDDDRYLF 716 VV L G+ND +PR+ L + K D+ +++ Sbjct: 719 PVVILAGLNDSSFPREYEDLRETKYKNGSAVFYTPRECLRYKSLDKDDVTLHYEEEERNI 778 Query: 717 LEALISAQQKLYIS 730 A+ AQ L +S Sbjct: 779 YVAMTRAQDLLILS 792 >UniRef50_Q21J64 DNA helicase/exodeoxyribonuclease V, subunit A n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21J64_SACD2 Length = 1155 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 93/896 (10%), Positives = 213/896 (23%), Gaps = 185/896 (20%) Query: 188 NLYQRFIETLESATTCPPGLPSRVFICGI-SALPPVYLQALQALGKHIEIHLLFTNPCRY 246 + ++ L VF + + L AL+ALG + P Sbjct: 368 EQQWQTLDALIQLLPLCTAHLKLVFKESSQTDFTEITLSALRALGSESD------TPTD- 420 Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL------FNSDGEQDVGNPLL 300 L R ++ + L VG+ + Sbjct: 421 ---------LSLILDYRLNHVLIDEFQDTSSIQLNLLKLLTQEWQPDEGRTLFIVGDGMQ 471 Query: 301 ASWGKLGRDYIYLLSDLESSQE------LDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 + +G + L+ ++ E ++ V+ + + N +D+ ++ A + Sbjct: 472 SCYGFRNANVGIFLNIRDNGLENVPMSAVNLCVNFRSNQAVVNWVNDVFKVA--FPAQND 529 Query: 355 IEEFSRSDNKRPLDPLDS----SITFHVCHSP---QREVEVLHDRLLAMLEEDPTLTPRD 407 I + S + H + E + + + LE +P + Sbjct: 530 INRGAVSYQPSVPFDTKELLSSHVECHGFVGDNGNEAEAQFVTSIIAQQLEVNPN---QS 586 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 I ++V + + I A + + Y D + P ++ +++ + + Sbjct: 587 IAILVRNRPHLTKIIT-----ALRSQNIAYQAVDIDPLLARPCVQDLLTITRVMQDQSDY 641 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 LA L P Sbjct: 642 LAWLAFLRAPWCG--------------------------------------LSLSELTVL 663 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 L + + + ++ D S L + + M L ++ Sbjct: 664 LGDHIYADTQPATHNVFATLHNEDLLSLLNTDTKNRVQRARMLLAQSFHQTQRKPLAALV 723 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 + + A ++ Q + G L Q+L Sbjct: 724 ESLWFALGGALIADNSNELDDARTYLQLLT------KHEKGGRIRQWDAFYAGL-QKLYA 776 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK------- 700 PV + T+ + + F V + G++ P + ++ Sbjct: 777 RPTPVDANVQPVQLMTMHKSKGLEFDTVFVCGLS---RPSKADDSPLLFWHERLNSYSEP 833 Query: 701 ----------------------PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD 738 + G +SR +D L A A+ +LYI+ Sbjct: 834 QTLLSPLSPKIESEADPVYAFLKEEGKQSRLLEDTRLLYVACTRAKARLYITAALTETPA 893 Query: 739 NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE 798 + P ++ + P N Sbjct: 894 AEIKPP-------------------ANNTMLARIWDAIQEQIITHVDPNVDMPSNDSVET 934 Query: 799 RQSYAREWLPAASQ-AGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNF 857 +Y R P A + + F Sbjct: 935 GSNYVRFLTPEAISGLHGLVDSALVTETEKQKTVFDNSDINIF----------------- 977 Query: 858 RTEDSEIPDTEPFILEGLSRYQINQQLL----NALVEQDDAERLFRRFRAAGDL-----P 908 + + + ++L + ++ E+L + Sbjct: 978 --------EDREVDNTAAAIGTLMHRILAVICDDGLDAWPLEKLAGMHKPWRAQLTANGV 1029 Query: 909 YGAFGEIFWETQCQEMQQLAD-----RVIACRQPGQSMEIDLACNGVQITGWLPQVQPDG 963 A E +T Q + ++ D +++ P E + + + +G Sbjct: 1030 PAATAEQALQTITQSVLKMLDDETARWLLSNSHPVSHCEWVVHYGSQPRDAVIDRFFIEG 1089 Query: 964 LLRWRPSLLSVAQGMQL--WLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQAL 1017 W + + + + + + + + E P + ++AL Sbjct: 1090 NTAW-IVDYKTSTPNKGETLEQFVSAQQAEYQPQVDFYQKLVKEIVPPEITIKKAL 1144 >UniRef50_D2BGG8 UvrD/REP helicase n=2 Tax=Bacteria RepID=D2BGG8_DEHSV Length = 972 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 85/809 (10%), Positives = 184/809 (22%), Gaps = 173/809 (21%) Query: 264 QRRHSFEDRELPLFRDSENAGQL-FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE 322 R ++ + E L S VG+ + + G D +L Sbjct: 223 LRHIMVDEYQDVNPCQEELVRLLHQRSQTLFVVGDDDQSIYAWRGADVSNIL-------- 274 Query: 323 LDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSP 382 F ++ +H + + A + + Sbjct: 275 --GFQGRYRNSTVHTLSQNFRSTAPIVQASDSFAAVLLGPS------------------- 313 Query: 383 QREVEVLHDRLLAMLEEDPTLTPRDIIVM-VADIDSYSPFIQAVFGSAPADRYLPYAISD 441 R+ L P+D+ V+ D + + ++ A Sbjct: 314 ---------RIAKNPAASTNLIPQDLRVLWFPDRSTEAGWVAARIRDLL----------- 353 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 A + + P A + + + Sbjct: 354 GTAYNDNGNIRGL---------------------TPADFAVLMRSTRQAEQDGVPRHTAF 392 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 + LE + + R +V + + ++A Sbjct: 393 TTALENLRIPFSLEAGGGPFDRPQTAVLRSTFELLRNVPLD-RNAVQQHFNNEVILAYPD 451 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWL----PVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 +L L W R + + + + D+L AF + + + Sbjct: 452 ADFTALARVLTDWSRRIHRPQGSSRIRLRPQQLVYDLLEAFNIAQTNFGDDIMRDIGLFS 511 Query: 618 AIIAEGLGA--QYGDAVPLSLLRDELAQRLDQ----ERISQRFLAGPVNICTLMPMRSIP 671 +I + S + + L + V + T+ M+ + Sbjct: 512 RMIMDVETVYMSVDSRQRFSEVLNFLQNAAETGYDVSTDDVLQRPDAVTVSTVHKMKGLE 571 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMS-----QKPKRGDRSRRDDDRYLFLEALISAQQK 726 F V ++ + +P++ + L + +S D++ LF A A++ Sbjct: 572 FPCVFIVDVEAHRFPKRRSSYSGWLPPGVMTSAINRGAYQSTPDEEIRLFYTAATRAERY 631 Query: 727 LYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 L++S Q S +L +H A + Sbjct: 632 LHVSGAENLPQARRPARRSPYALQL-----ATHPAVVQNAGGLPPGIVQATPRRRVEDAD 686 Query: 787 MPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVR 846 P ++ + P Sbjct: 687 YPTS-------------------------------------------FTEIKYYLQCPRG 703 Query: 847 AFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL------NALVEQDDAERLFRR 900 + R +N E+ + + + +L VEQ + + Sbjct: 704 YQLRQRYGLNPV--IPEMFGYGQTVHTSIQK---LHELYPNTPPSQDQVEQVVFDTFHLK 758 Query: 901 FRAAGDLPYGAFGEIF--WETQCQEMQQLADRVIA--CRQPGQSMEIDLACNGVQITGWL 956 P G + + A R+ ++ + I+G + Sbjct: 759 HVPQSGDPVNRPGAYENSRNRAVEIAEDYVASFGADFERERQVEAVFEIPTSNCVISGSI 818 Query: 957 PQV----QPDGLLRWRPSLLSV--------AQGMQLWLE-----HLVYCASGGN-----G 994 + + +L W E L A+ Sbjct: 819 DLLLHEDEHGEILHAEIIDFKTMEGGEAPAENDDLDWTELALQVQLYARAADQVMGQNTR 878 Query: 995 ESRLFLRKDGEWRFPPLAAEQALHYLSQL 1023 + L KD + P+ E LS + Sbjct: 879 TGSVHLLKDNQRIEVPITQEAVNAALSNI 907 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 47/415 (11%), Positives = 92/415 (22%), Gaps = 61/415 (14%) Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLL 239 +L R L L R + I A P + L + Sbjct: 173 AAEDQDVGDLLIRIRSGLREDQYIDFSLMIRDVVDSIRANVPGLENGIGNLRHIMVDEYQ 232 Query: 240 FTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPL 299 NPC+ + S VG+ Sbjct: 233 DVNPCQEELVRLLHQR---------------------------------SQTLFVVGDDD 259 Query: 300 LASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFS 359 + + G D +L F ++ +H + + A + Sbjct: 260 QSIYAWRGADVSNIL----------GFQGRYRNSTVHTLSQNFRSTAPIVQASDSFAAVL 309 Query: 360 RSDNKRPLDPL------DSSITFHVCHSPQREVEVLHDRLLAMLEED-------PTLTPR 406 ++ +P + E + R+ +L LTP Sbjct: 310 LGPSRIAKNPAASTNLIPQDLRVLWFPDRSTEAGWVAARIRDLLGTAYNDNGNIRGLTPA 369 Query: 407 DIIVMVADIDSYSP---FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDS 463 D V++ F +A + +P+++ P S L + Sbjct: 370 DFAVLMRSTRQAEQDGVPRHTAFTTALENLRIPFSLEAGGGPFDRPQTAVLRSTFELLRN 429 Query: 464 -RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 V + V+ A D L + + R + Sbjct: 430 VPLDRNAVQQHFNNEVILAYPDADFTALARVLTDWSRRIHRPQGSSRIRLRPQQLVYDLL 489 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 M G + ++ E+ + + + +L L Sbjct: 490 EAFNIAQTNFGDDIMRDI-GLFSRMIMDVETVYMSVDSRQRFSEVLNFLQNAAET 543 >UniRef50_D0BK91 ATP-dependent nuclease subunit A n=2 Tax=Granulicatella RepID=D0BK91_9LACT Length = 1244 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 72/877 (8%), Positives = 189/877 (21%), Gaps = 177/877 (20%) Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRD---YIYLLS 315 ++ + + + VG+ + + D + Sbjct: 394 YYKELFTEVLIDEYQDVNRVQEAILTSVARENNLFMVGDVKQSIYAFRLADPSLFRDKYE 453 Query: 316 DLESS---QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS 372 + + + + + + + I G + S + L+ D Sbjct: 454 AYADENGGKRIILAENFRSRDQVLSFTNLIFRQIMDHELGQIDYDDSAALKTGNLNYSDD 513 Query: 373 SITFHVC-------------------------HSPQREVEVLHDRLLAMLEED------- 400 + F C S EV + ++ ++ Sbjct: 514 TDKFSECYIIQNANLEEEEEESSGLESESPIDSSASAEVHFIAGKIKELMANQFEIMHEE 573 Query: 401 --------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLE 452 + +DI+++ + + +P + + Sbjct: 574 STKENPKKRPIQYKDIVILAPTKANNG-----LIEEIFTQYQIPVLVQKNLQYFKRTEIA 628 Query: 453 AFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVR 512 +S L + D+ +++L ++ + + N + + Sbjct: 629 IMMSALKIIDNPTQDIPFVSVLRSGIV------GLDEIALAHIRKNNKSCSFYEACVHFV 682 Query: 513 ELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLN 572 E + S +L + S L QL Sbjct: 683 EHFTLEEVNYYD-----------------------------SSQQQQLKERIKSFLDQLE 713 Query: 573 IWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAV 632 WR + + D ++ L + + + Sbjct: 714 SWRDIANHQSISTLIWQIYMDTNYLTYVHGQSVGQQRVLNLHALYKYAKDFEDSSFKGLR 773 Query: 633 PLSLLRDELAQRLDQERISQR--FLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY----- 685 ++ + + V + T+ + + + VV L+ Sbjct: 774 NFVRFIQQMQHKKQDLEEPTQISDEEDAVRVMTIHASKGLEYPVVFLMNAGKKFNQQDIR 833 Query: 686 ------------------PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 P ++ K ++ A+ A++KL Sbjct: 834 QQAIRSDELGVGVKYLQLPERIQWTTI-PYVMAYKAEKNKLLSEEMRKLYVAMTRAREKL 892 Query: 728 YISYIGRS------------IQDNSERFPS------VLVQELI--DYIGQSHYLPGDEAL 767 I + D+ S + ++ Q E + Sbjct: 893 IIVGSLKDFDKFKEEHSMIEDIDDETLPYSLRYHVDNYLTWILMATMRKQEKVSFHQEVI 952 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL--- 824 + ++ + + T + + Q + + + + Sbjct: 953 DFEQIKQNALNWIQETETTSINEVEWLQKQVEGKPVKNLSNLLEDLKQTYPYLLASTTAS 1012 Query: 825 ---------PFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 P+ L L+ + Q + + S I + + Sbjct: 1013 YQSVSEIKRMNEEPDVKQLPQLEEQTQETEKNVQQYVYLTSELAKPSFIESKQK--VSAA 1070 Query: 876 SRYQINQQLLNAL-----VEQDDAERLFRRFRAAGDLPYG-----------AFGEIFWET 919 R L+ L + + + ++ L F + + Sbjct: 1071 ERGSGLHLLMQKLDLTKEITPEFIQETIQQLVETQFLEKEVAAVIPVDQVYHFFQSEFGQ 1130 Query: 920 QCQEMQQLADRVIAC----RQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVA 975 QE Q L +R A + + + I G + + Sbjct: 1131 WIQEHQALLNREQAFSHVVTAKRIFKHLPDNEDSMLIHGIIDG-FVELDDEIILFDYKTD 1189 Query: 976 QGMQL----------WLEHLVYCASGGNGESRLFLRK 1002 + + + L A + + K Sbjct: 1190 HVVPTQKGIQKVVDKYKQQLNLYAEALETSYQKKVTK 1226 >UniRef50_O26611 DNA helicase II n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26611_METTH Length = 683 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 69/581 (11%), Positives = 149/581 (25%), Gaps = 89/581 (15%) Query: 173 VEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISAL----PPVYLQALQ 228 LG + R L Q F + P L G Y + L Sbjct: 126 HREQLGLGNVQRERFPLIQGFFSECQENMVDPETLIQHYRNKGAGRFEMTVAEAYQRYLN 185 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 L + R D L L +R R ++ + L Sbjct: 186 -LMDENGLLDFAGMQWRVVRLLENDSKILDDLRSRYRFLMVDEYQDTNQIQERFLELLAG 244 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHN----------I 338 + + + + Q + F TP+N L + Sbjct: 245 EE--------------------CNIFAVGDEDQSIYGFRGSTPENFLGFQKKYGAEVVML 284 Query: 339 QSDILELENRAVAGVNIEEFSRSDNK--RPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 + + + + + R K RP+ ++ + + Q E + + A+ Sbjct: 285 EKNFRSVPSIVDVTQRFMDGYREYPKDIRPVRDSENRVFILDNPTHQDEPSNVVGIIRAL 344 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 ++ + ++ + + I + +P+ + + + Sbjct: 345 VDHGVIPHQGYVTLLFRSVKHDAVEIM----NELRREGIPFNVYGEGGFFDREEILYIMH 400 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 LL + +R L+ E R L++ Sbjct: 401 LLHHTRNERRKI---------------------IRKLKYEHLEGEFMDLTPGSVNRILDM 439 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 R G+ + ++ +S L L + Sbjct: 440 DEEELRGLREHREFRGAGFTDPDDIRKLVALNRLIDSD-------------LGVLERYYE 486 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG-DAVPLS 635 L + + + ++ ++I + L Sbjct: 487 ILE-----------LTEYPHRLLERGDDESREKLYNLARFSSLIKDYERISLEPGVEGLM 535 Query: 636 LLRDE-LAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 ++ R+ + VNI T+ + + F VV + + +G +PR++ Sbjct: 536 EFIRMAMSGRIKKYDQILLDNPYSVNIMTMHRAKGLEFPVVIICSVFNGKFPRKVRERSE 595 Query: 695 D-LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 L + + R+ ++R LF + AQ L +S Sbjct: 596 LELPEELRRSTMRTDEIEERRLFYVGMTRAQDMLIVSATKN 636 >UniRef50_Q1D938 Putative uncharacterized protein n=2 Tax=Cystobacterineae RepID=Q1D938_MYXXD Length = 1079 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 81/740 (10%), Positives = 174/740 (23%), Gaps = 111/740 (15%) Query: 361 SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 + L S+ + + E +L + +L + P DI V ++ + Sbjct: 260 RAPRDVLKDAVPSLRVWNAATARDEARLLARDVRRLLA--EGVAPGDIAVAYRELGPEAG 317 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 + + +P + + + L L + F E + L+ Sbjct: 318 ----WLAESLGELGVPVRLPWGEPLGLAGPVRLALDLPLLVEDGFPVERMAELMGSRYAP 373 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGI-DDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 + L R G ++ L + TR Sbjct: 374 KLSRGGPDAPATLFAQAAVRDDRLGAVRGRGAYDVRLDGLARRLLALNGTRKAQDSTRVD 433 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 A + + G A LL L P L A Sbjct: 434 AVKLLRERCLLLVEACRRIPEEGTAAELLAAWWQVVERLGLVDSEGALAPREEGGLGARA 493 Query: 600 LPDAETEAAMTLIEQQ-WQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP 658 + A + Q + G + L + + R G Sbjct: 494 ADARARDDAAREALRLRVQGLTRMMKAVGGGPKMRRRTFGRWLRDAMADAHLPPRGPRGA 553 Query: 659 -VNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD------------ 705 V + + + F+ + L G+ +G +P + AP +++ Sbjct: 554 AVEVLDVAELPGRSFQDLFLAGLTEGRFPGRDAPSPLLADAERAALNKHLGRDVFRLTGG 613 Query: 706 ------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDY----- 754 R +DR LF AL +A+ + +S+ S E+ PS ++E+ Sbjct: 614 EFDERAAWRLTEDRLLFASALAAAEANVSLSFAVESA-GGQEQVPSAFLEEVRRLTALKW 672 Query: 755 ----------IGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 + + E+ ++ K +T + + P + AR Sbjct: 673 EPRSLSPIPPLDEVLTESELRRCVALEALSQPKLRVTEPDAAAAVLRRRFAPEAWYAGAR 732 Query: 805 E--------------------WLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHP 844 E + + F + + L RF Sbjct: 733 ELSEVEMERLFFFGDPKVQPGPYSGSVDLDTQRESLRETFRFDITRPLSASALARFGNCG 792 Query: 845 VRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ------------- 891 + F L+V E + R +++ + Sbjct: 793 FQGFLSYGLKVAEPDVPGE-------EFDARGRGTFWHKVVEEVFAALKEKQLLGKAPEE 845 Query: 892 -------DDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ--PGQSME 942 + + F + + ++ E +++ Sbjct: 846 VPDEVLDAALKAAIKDFERVHHVGHPELWKLAHERARAMARRILVDERRGLPFDTMTPEN 905 Query: 943 IDLACN------------------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEH 984 + V G + ++ + + L+ Sbjct: 906 FEFRFGPAARDDKWSNVVLHAGEEPVYFEGTIDRLDK-SGGEVGVIDYKSGRLDKRSLKE 964 Query: 985 LVYCASGGNGESRLFLRKDG 1004 + + R+ G Sbjct: 965 RLLTSDFQLPLYLYAARESG 984 >UniRef50_A8U0G7 Inactivated superfamily I helicase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U0G7_9PROT Length = 1005 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 106/987 (10%), Positives = 208/987 (21%), Gaps = 160/987 (16%) Query: 115 LTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPL-WKALV 173 + + +L++ A L DQ +E + A+ W L + +V Sbjct: 124 VAAPRSPEQAVRLAAALAGLIDQVQAEG----LAFEALTGLVPSEYAEHWGLTLRFLTIV 179 Query: 174 EYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSR--VFICGISALPPVYLQALQALG 231 + R + + T P V I G + P + A+ Sbjct: 180 TELWPKWLEEQGAVDPVVRRDALMRARATAWQAAPPSDPVIIAGSTGSVPATAGLMTAVL 239 Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 + L+ + + G Sbjct: 240 GLPQGTLVLPG------------LDQDSDDSVWASVGTDAAHPQHGLHRLLVGLGIPRGD 287 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 G +++ + P Sbjct: 288 VGL----------WPGAAT---FVPATAARARMLREAMRPAATTEAW------------- 321 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVM 411 + S+ P I SP+ E + + +LE ++ Sbjct: 322 --RMLATRPSEPDAPATGAFDGIRRLEAPSPREEAGAIAMLMREVLETPGRTA----ALV 375 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 D + S L S R + Sbjct: 376 TPDRS-----LARRVASELERWDLTVDDSAGRPLAESAPAAFLRLI--------GDLAAE 422 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 VP+ L L+ + G VR LE G T + Sbjct: 423 QAAPVPL-----------LAALKHPLAAGGQAPDAFRRMVRRLERLVLRGPRPAPGFTGL 471 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 + + GL L L +L E L Sbjct: 472 RRAVEVLEDKHAEARAGLLVWVDGLAGRLGPLLDTLNRPAVAATEMADAHARAAEALAQS 531 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 A L + A+ + + + + L L R+ + R Sbjct: 532 DQQSGADRLWRGDAGEALARLFDEMRDALDALEPVPGRAWPGL--FEALLESRVVRPRWG 589 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 ++I + R F V L G+N+G +P AP + + G + Sbjct: 590 AHP---RLHILGALEARLQRFDRVILGGLNEGTWPADPAPDPWMSRPMRRDFGLPAP--- 643 Query: 712 DRYLFLEA----LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEAL 767 +R + L A + ++ ++ R + + PS + L + Sbjct: 644 ERRIGLAAHDVSMAFGAPEVVLTRATR--VEGTPTVPSRWLLRLETVARALGAEAEFRSD 701 Query: 768 NCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFT 827 + + P Sbjct: 702 PAPVAWHGQLDRPASVEPGKA------------------------------PLPCPPVHV 731 Query: 828 LPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNA 887 P T+ + + + P + L + + P R L+A Sbjct: 732 RPRTLSVTRIDTWLRDPYSIYASRILDLRALDDLDSDP-------NAAERGNAIHNALDA 784 Query: 888 LVEQDDAERLFRRFRAA---------GDLPYGAFGEIFWETQCQEMQQLADRVIACR--- 935 V + + L +W + + R Sbjct: 785 FVAAYPRDLPPDPLQRLLEYGQASFADHLDRPGVWAFWWPRFERVAAWFVEVERDRRRGL 844 Query: 936 -----QPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVA------QGMQLWLEH 984 + + + +TG ++ G + Sbjct: 845 SATVTEQKGRLAVPGPAGDFTLTGIADRIDRMGDGTYAIVDYKTGGYPSKNDLKNGAAPQ 904 Query: 985 LVYCA----------SGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAP 1034 L A S L + G PP A + +++L+ G+ Sbjct: 905 LPLEALILAGGGFPDLPVAPVSSLAYWRVGGGD-PPGAIDAVESGVAELVAEAEAGLRTL 963 Query: 1035 LLVLPESGGAWLKTCYDAQNDAMLDDD 1061 + + + + D Sbjct: 964 IATFDDEQTPYHSVPDAGRKPRFNDYA 990 >UniRef50_A7HPC8 Double-strand break repair helicase AddA n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HPC8_PARL1 Length = 1156 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 91/830 (10%), Positives = 185/830 (22%), Gaps = 179/830 (21%) Query: 250 DIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS-----------DGEQDVGNP 298 P L KL ++ + + +L + VG+ Sbjct: 385 RAMAPWVLYKLDGGIDHILIDEAQDTSPEQWDIIARLADEFLSGSGARGVVRTIFAVGDE 444 Query: 299 LLASWGKLGRDYIYL----LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 + + G D + + + D P ++L ++ + Sbjct: 445 KQSIFSFQGADPARFDDMKIYFERRVKASEQRWDYVPLTRSFRSVPEVLAAVDKVFESLK 504 Query: 355 IEEF-----SRSDNKRPLDPLDSSITFHVC--HSPQREV--------------------E 387 + + + + +E Sbjct: 505 ARSGLTASGNLDIHIAHRELDAGLVEIWELEEPDEGQEASPWDAPLDYMTEAAPMAKLAA 564 Query: 388 VLHDRLLAML-------EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 + + L + + DI+++V +++ + + +P A + Sbjct: 565 RIAATIRNWLDSKEVLISKGRPIRAGDILILVRRRNAFVGEMVR----HLKELGVPVAGA 620 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 DR + ++L + +L P + + Sbjct: 621 DRMVLTEQLAVMDLLALARFVLLPEDDLTLATVLKSPFAGFTEEEVFDLA---------- 670 Query: 501 GIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL 560 W + L+ AT + +L + ++ G L Sbjct: 671 ---WNRKGTLWQSLKEKATRNPRYAEAAAFLLRLLERADYEPPYEFFAHVLGGEGGRTRL 727 Query: 561 VGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 + L + Sbjct: 728 LARLGP--------------------------------------------EAADPIDEFL 743 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 + L + L L + + + V + T+ + + ++V + Sbjct: 744 SLALEFERKHPPALEAFVHWLERGSSEIKRDMDQGRDEVRVMTVHGAKGLEAEIVFMPDT 803 Query: 681 NDG----------VYPRQLAPLGFDLMSQKPKRGDRS------------RRDDDRYLFLE 718 P L+ K+ + + + R L Sbjct: 804 CAAPGGSHDPALLSLPALEQDGPKLLLWPVRKKDEDEVSAGARALHREIQAAEYRRLLYV 863 Query: 719 ALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 AL A+ +LYIS PS + + A Sbjct: 864 ALTRARDRLYISGYRN------ATPPSS------ECWYEMVCETLKPAAREIVLPDGRMV 911 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQ 838 R D + E S EW A + P P +P E L+ Sbjct: 912 WRIEGEQRRQVDSKAPSAAEEPSAPPEW------AHRDAPLEPTPSRPLAPSRLPPEDLE 965 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF 898 + S + R + +LL +L + + AER Sbjct: 966 ------------------EPSVLSPLAGDNT---NRFRRGSLIHRLLESLPDMEPAERRA 1004 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME-------IDLACNGVQ 951 R +G E + + L D IA S I+L + Sbjct: 1005 AARRFLAQPAHGIDEAAQNEIEAAVFRVLDDATIAHVFGKGSRAEVPVAGTIELGGRPLL 1064 Query: 952 ITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLR 1001 I G + ++ + LE +V G R L Sbjct: 1065 IAGQIDRLCVTED-SVTIIDYKTNRPPPQTLEAVVPAYIGQMAAYRALLA 1113 >UniRef50_C6P6T0 UvrD/REP helicase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6T0_9PROT Length = 1134 Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 81/634 (12%), Positives = 157/634 (24%), Gaps = 121/634 (19%) Query: 224 LQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENA 283 QAL+A + ++ L CR KL +R R ++ + + Sbjct: 343 YQALKAQKQQMDFSDLEWQLCRLLQQSEHAETMQYKLDSRYRHVLLDEFQDTNPLQWQIL 402 Query: 284 GQLFNSD-------GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH 336 F++ VG+P + + D L + ++L Sbjct: 403 RAWFDASVAVDSQPTVFVVGDPKQSIYRFRRAD-ARLFGVAREYLQEYFSAQTQGNSLTR 461 Query: 337 NIQSDILELENRAVAGV-----NIEEFSRSDNKR------------------------PL 367 +++ N +E + Sbjct: 462 RNSQPVVDAVNAVFHEQPDGFEFVEHQTHQKELPGYVLVLPLAVAEVIPSPNGGGDINGA 521 Query: 368 DPLDSSITFH-VCHSPQREVEVLHDRLLAML-----------------EEDPTLTPRDII 409 + +P+ E E ++ A ++ T DI+ Sbjct: 522 GGEGEELRLRDPLTTPRDEAEEGARQIEAAQFAEMLQTIARDWSVNEGGQERRATYGDIM 581 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 V+V + V+ A R++P+ S R E +LL + F Sbjct: 582 VLVRSRTHLT-----VYEEALRARHIPFISSRRGGLLDTLEAEDVQALLMFLITPFADLA 636 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 + +L P+ F ++ L L Q E G + + +W L Sbjct: 637 LAQVLRTPI----FACSDADLMRLAQNSAEYGATSSEGGAEISAQRSALGTRTSWWQRLQ 692 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 + + L L W + + Sbjct: 693 HL--------------------------GDPSPALRRATGLLQRWLALADKLPVHDLLDR 726 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER 649 + + + A + L G L EL + D + Sbjct: 727 IYFEGDVLARYAAVLPPEMRAKVAANLHAFMEIALSVDAGRYPSLPRFLQELRELRDSKD 786 Query: 650 ISQRFL-----AGPVNICTLMPMRSIPFKVVCLLGMNDG-----------VYPRQLAPLG 693 + V I T+ + + +V LL N +P Q Sbjct: 787 DAPDEGKLGSAGDAVRIYTVHESKGLEAPIVWLLDANAEKRSMAGNDVLLDWPTQEPQPS 846 Query: 694 -FDLMSQKPKRGDR----------SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 F L + + RG + + ++ L A+ AQQ L +S + E Sbjct: 847 HFSLYADQASRGKKRAHLFEQDAAQQAREEMNLLYVAMTRAQQALIVSG----NKGGKEN 902 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARV 776 + + + + E + Sbjct: 903 RSTTWYERIAAVARDQENPLRKAVPSAVEKQGAA 936 >UniRef50_C8WGH3 UvrD/REP helicase n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGH3_EGGLE Length = 1165 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 83/819 (10%), Positives = 176/819 (21%), Gaps = 84/819 (10%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS--DGEQDVGNPLLASWGKLGRDYI 311 P A+ R + ++ + + +L VG+ + + G D Sbjct: 344 PDIAARYERRFKLVMVDEFQDTSQLQIDMIARLAGPRCAHLCTVGDAQQSIYRFRGADVN 403 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA--------VAGVNIEEFSRSDN 363 + ++ + + D+L +R A +++E + + Sbjct: 404 VYEAHKKAMRADEVGALYVELTKNFRSHGDVLSFVDRVFEQSTVFGEAFMSLEPNEQRPS 463 Query: 364 -----------KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 + P + + E + R A+ + P D++V++ Sbjct: 464 CYRGSAPRIDLVLSVQPAGRGTGVRTADAKRAGAEAIARRFAAL--REDGHAPGDMVVLL 521 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 + + A ++ S P + + + + + Sbjct: 522 GKMSRAGMY-----AEALRAEGFECVVTGGSLFASAPEVRVVARFVEALANPANTAALFE 576 Query: 473 LLDVPVLAARFDIT---EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 +L ++ D V + G R LP H R Sbjct: 577 VLTSDMMRLSADDLLVLTTEEDPETGCVRRRDLDRGFARLASRADGLPPRLAHAVRLFER 636 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR--------RGLAQE 581 A +V+ + L E A L R R L Sbjct: 637 ARDESRTRPVATVVRDAVVRSGWMARLEEEGAAGTARAANVLKAVRLVDRLETERHLGLA 696 Query: 582 RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQ---------WQAIIAEGLGAQYGDAV 632 L + + I A+ + Sbjct: 697 STARALADELAVGLKEAPGALSGAGGDVVKIMTIHASKGLEFPVVALADFADARAGSGKL 756 Query: 633 PLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRS-IPFKVVCLLGMNDGVY-PR--- 687 + L + F ++ + +G P Sbjct: 757 LVETCGAIARASLAPAASLEAFPQLAKRSGAAAAGDGEDDADLLAARRLVEGEDGPACAL 816 Query: 688 -QLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 + +Q +R + R L A + L ++ ++ + Sbjct: 817 GASSCTQAAYRAQLARRAADEELAEARRKLYVGLTRASEALVVAMDAKAPSAGKPPAYAP 876 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREW 806 LV ++ + P A A + + P + Sbjct: 877 LVDDIRSALCGDGDFPEGVAELPYGGTAPARFERILVQPPEPRAEE-------------- 922 Query: 807 LPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPD 866 A + FV + T+ L R A + L D Sbjct: 923 --GVEPAPEPRLFFVPVVDDASRSTLFAGGLARDDAFSYSSIAPNPLPAPADEGVPFAAD 980 Query: 867 TEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEM-- 924 + + + VE R + C+ Sbjct: 981 AD----KATDLGSAFHRAAQLAVETGRVPGAARLGVLSEAYALSTGQRARLADACERWFS 1036 Query: 925 QQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLL----RWRPSLLSVAQGMQL 980 + + + + + G + + D R Sbjct: 1037 SATYAETLQWGLRRAEVPFFVPISDAFVEGEIDLLCTDDAQLAGARALVVDYKTGGSDGE 1096 Query: 981 WLEHL----VYCASGGNGESRLFLRKDGEWRFPPLAAEQ 1015 E L + A + E RF + E Sbjct: 1097 APEALRSKHLLQAQCYAYALLRQGCVEVELRFARVERED 1135 >UniRef50_C4G8V9 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G8V9_9FIRM Length = 1315 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 95/919 (10%), Positives = 220/919 (23%), Gaps = 164/919 (17%) Query: 152 GHLVEGLGEAQAWQAP-LWKALVEYTHQLGQPRWHR----ANLYQRFIETLESATTCPPG 206 ++ + Q+ +++ L + + A + ++ + Sbjct: 301 DEELKARAKDLRDQSKKVFEQLRRDYSGDPAAEFDKLSVMAPYLKTLLDLTKEYAVSFEA 360 Query: 207 LPSRVFICGISALPPVYLQALQALGKH-IEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQR 265 + + + L L+ L+ + N CR Y Sbjct: 361 CKRKKNVVDFADLEHYALRILRDPADPAHPMTETAENLCRQY-----------------A 403 Query: 266 RHSFEDRELPLFRDSENAGQLFNSDG----EQDVGNPLLASWGKLGRD---YIYLLSDLE 318 ++ + + SD VG+ + + + L + Sbjct: 404 EVMIDEYQDSNNLQEAILSAVAGSDQGEHKTFMVGDVKQSIYSFRQARPELFNSKLKSYD 463 Query: 319 ----------SSQELDAFVDVTPDNLLHNIQSDIL-----------------------EL 345 SQ +D + + + + I + Sbjct: 464 KLTAESQKTVRSQRIDLSRNFRSRQEILDFANHIFYRVMQEDLGGVAYHEDVALHLGADY 523 Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR-EVEVLHDRLLAMLEEDP--- 401 A A E S + ++ E ++ +R+ +++E Sbjct: 524 PATAAAVSGKAEDPYSAELILCEQDMEALEALGLEDKAELEANMIGERIQRLMKEQKVVN 583 Query: 402 ------------TLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 L +DI++++ S VF +P I+ + Sbjct: 584 EEAEEGDQNPLRRLRYQDIVILLRSPGSNG----QVFVDRLTQMGIPAHITSGKGYFDTV 639 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 + F++LLSL ++R + A++ V F TE+ L +R D+ Sbjct: 640 EVSRFLALLSLLNNRQDDRSLAAVMLSHVFGEPF--TEDQLYLIRSAYPRLTTGQDRGDE 697 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 + +R +L E + L L + Sbjct: 698 SRDIQNACLWESLEAMESYSRGILAGEKEDSDQ------RPGHLLELDTSLPQKVLDFCD 751 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 +L R + + + ++ + G+ Y Sbjct: 752 RLEAARARIPYTPIHRLIEELLDETAYLNYVTALPGGQIRRANLLKLVDEAIRFEGSSYR 811 Query: 630 DAVPLSLLRDELAQRLDQERISQ--RFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPR 687 +L ++ V I ++ + + + VV + G+ R Sbjct: 812 GLYRFMNYIQKLRTYNVDLSAAELIGEEDDAVRITSIHKSKGLQYPVVFVCGLGQKFNMR 871 Query: 688 QLAPLGFDLMSQKPKRGDRSR----------------------RDDDRYLFLEALISAQQ 725 + M R+ ++ + AL A++ Sbjct: 872 DSSGDMLIEMDLGISLRTRNAAKRTMSDSLFHRAVSDQRKENSLAEEMRVLYVALTRAKE 931 Query: 726 KLYISYIGRSIQD--NSERFPSV------------------LVQELIDYIGQSHYLPGDE 765 KL +S +++ + E + + ++ + L Sbjct: 932 KLILSGSLSRLKERLDQEWEATRGKGDGYVLPYHRRMGAKNYLDWILPSLASYGELYRQS 991 Query: 766 ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 E P + E L + Sbjct: 992 IHCYIPGEDGAL----TWGQEQAESPGRADCDGTPANHLEDLKDLPGTEALLQYLRRVFA 1047 Query: 826 FTLPETVPLETLQRFWAHPVRAF-FQMRLQVNFRTEDSEIPDTEPFI------------- 871 + P ++ ++ Q+ + E D + ++ Sbjct: 1048 YRYPYAASQNYKSKYSVSEIKHASMQLGMGEKEGQEIFRPVDEDRYVPEFARAVTEERGQ 1107 Query: 872 -----LEGLSRYQINQQLLN-----ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC 921 G R +++ D + RA G L G + + Sbjct: 1108 NNKKIHPGALRGTAMHRVMECLDFAREDYADSLGEQLDQMRADGRLSEEELGLVLPDRIQ 1167 Query: 922 QEM-QQLADRVIACRQPGQ 939 + Q +ADR+ G+ Sbjct: 1168 SFLKQDMADRIHRSAVEGR 1186 >UniRef50_C0BDK3 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BDK3_9FIRM Length = 1214 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 70/830 (8%), Positives = 188/830 (22%), Gaps = 160/830 (19%) Query: 259 KLLTRQRRHSFEDRELPLFRDSENA----GQLFNSDGEQDVGNPLLASWGKLGRDYIYLL 314 + ++ + + VG+ + + + Sbjct: 385 EYQNTFEEVMIDEYQDSNLIQEAILTSVSRISRGENNLFMVGDVKQSIYRFRLSRPELFM 444 Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENR-----------AVAGVNIEEFSRSDN 363 + + ++++L+ N + + Sbjct: 445 EKFNTYSLTYGGNRRIDLHKNFRSRAEVLDAVNFIFRQIMTEELGRITYDENAALYVGAS 504 Query: 364 KRPLDPLDSSITFHVCHSPQR----------------EVEVLHDRLLAMLEED------- 400 + ++ I S + EV ++ R+ ++E Sbjct: 505 YPESEKNETEILLLDTKSEEEDTGLSVRSGSQTAKELEVRLIAQRIGELMENQQIVDKET 564 Query: 401 ---PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 + +DI+++ ++ + + +P + + Sbjct: 565 GMLRPIRYQDIVILTRSPAGWTDTVTRILQDE----GIPVLAESADGYFETLEIGWMMDY 620 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L + D+ ++A+L P +T E L +R+ Sbjct: 621 LRVLDNFRQDIPLVAVLKSPFGR----MTNEELAQIRE---------------------- 654 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS---GLIAELVGHLASLLMQLNIW 574 + + +Q+VL + L A ++ + + L + Sbjct: 655 -------------------LNAEVPFYQNVLETADPEKKTDLPAGILKKVRDVFGWLFYF 695 Query: 575 RRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPL 634 R + + + + ++ Y Sbjct: 696 RERIPYTAIHDLLWEIMKKTGYRDYIAAMPGGKGRRANLDMLITRAKAFEATSYKGLYHF 755 Query: 635 SLLRDELAQRLDQERISQ--RFLAGPVNICTLMPMRSIPFKVVCLLGMN----------- 681 D+L + + V + ++ + + F VV + GM Sbjct: 756 VRYIDQLKKYNVDFGEAGLYDEQTDAVRLMSIHKSKGLEFPVVIVTGMGKRFNIQDTTAS 815 Query: 682 -----------DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYIS 730 D + + L ++ + AL A++KL ++ Sbjct: 816 VVIHPDLGFGIDAIDLERRTKSPTLLKKVIQNEIGLENLGEELRVLYVALTRAKEKLILT 875 Query: 731 YIGRSIQDNSE--------------------RFPSVLVQELIDYIGQSHYLPGD-EALNC 769 D E R S L + ++ +P + + + Sbjct: 876 GTVPHAADKLEACQLEQENSQKETLDFTKLARATSYYDWILPAAVRKTEEVPIELKVIGV 935 Query: 770 DESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLP 829 D + + + E + A + L Sbjct: 936 DTLVEGEVDKEAADYLEKEVFLEKIEAEEHPMSVTDERFRAKIEEAFSYRYPYQGEDQLK 995 Query: 830 ETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL- 888 + L+++ A ++ + E ++G ++ +++ L Sbjct: 996 MKYTVSELKKYAAASEEEDGEILIPEEEIVPILPNFMKEEEEVKGATKGTAYHKVMELLD 1055 Query: 889 ----VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ----QLADRVIACRQPGQS 940 D + G L G G I + + + + + + Sbjct: 1056 FSKIYTMDLLRENIENLKNEGYLDAGTAGCIQKKEIMEFLNTNVGKRMQNAARAKTLYRE 1115 Query: 941 MEIDLACNG------------VQITGWLPQVQPDGLLRWRPSLLSVAQGM 978 L + V I G + + + Sbjct: 1116 QPFVLGVDAKEFYPDQKKGEMVLIQGIIDAYFEE-DGEIIVLDYKTDRVQ 1164 >UniRef50_Q2SPC8 Superfamily I DNA and RNA helicase n=4 Tax=Gammaproteobacteria RepID=Q2SPC8_HAHCH Length = 776 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 80/698 (11%), Positives = 183/698 (26%), Gaps = 89/698 (12%) Query: 149 WETGHLVEGLGEAQAWQAP---LWKALVEYTHQLGQPRWHR-----ANLYQRFIETLESA 200 G L +G+ + Q LW+ L + + Q R L R ++ +++ Sbjct: 121 IREGVLPAFVGQVLSDQEIHFQLWQLLRRHAPESHQDSVKRNKKEYIELASRLLDMSKTS 180 Query: 201 TTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKL 260 + ++ A + + +A K + P + + Sbjct: 181 LLPLQTVFEQLEYRKELAFLIEVVNSFEAWRKSHSRISFADMLYEPVKCLQESPDLVKLV 240 Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLFNS-DGEQDVGNPLLASWGKLGRDYIYLLSDLES 319 + ++ + + + VG+P + G ++L+ Sbjct: 241 ADKMDVILVDEYQDTNEIQHLLLRYIAGARARVTVVGDPDQTIYEFRGAQPEFILNRFAE 300 Query: 320 SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVC 379 E + + L N + + + + + D + Sbjct: 301 EFESPRE---FTLSYTFRYGHKVALLANHLITHNHGRKDLLCRSHKGTPSTD--VNVLQG 355 Query: 380 HSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI 439 E L +L +L + P DI ++ P A +PY I Sbjct: 356 GD---ETRQLVLQLGRLL--NGGGEPEDIAILFRVWSQAVPV-----ELALLAHRIPYRI 405 Query: 440 SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI---TEEGLRYLRQW 496 + ++ + +L + R + +V RF ++ LR L Sbjct: 406 DGDKGALANREVMHIQYVLEMASGRLGMLEENKRAEVLAGLLRFPHVGLKDDTLRELAHI 465 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 + + WG + L + Q+ + G Sbjct: 466 LAQHDAHWG----------------DQLLEWIPDSLHALQKRKLKRTAQAWSLLPKMKGS 509 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 A++V +E + + + + + + ++ Sbjct: 510 AADIVRFYIDDTELFKTLEELALTHDTADERINNVLGVEHYLATLNLPSLETLQHFDEL- 568 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVC 676 + S + G V + T+ + + + VV Sbjct: 569 ------------------------------RRLASAQKQQGGVTLSTMHRTKGLEWPVVM 598 Query: 677 LLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 L+G+N+ P + + +R L A+ A++ LY+ + Sbjct: 599 LIGLNEQYLPYSMRGGEDIVD----------HLQAERRLLYVAMTRAKEALYLFTPTLND 648 Query: 737 QD--NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNY 794 + + + PS V+E G+ +++A AH P + Sbjct: 649 KTALSKDDKPSRFVKE---ACMDVSMAVGEFLDQRKQTDANDSAHYESGQRLTPIATRYL 705 Query: 795 QPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV 832 A+ + V+ E + Sbjct: 706 DWHNVNYEQPAQAAASEPEQIWSGDRVRHSILGEGEVI 743 >UniRef50_B8DL18 UvrD/REP helicase n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DL18_DESVM Length = 1161 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 96/825 (11%), Positives = 184/825 (22%), Gaps = 133/825 (16%) Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-----EQDVGNPLLASWGKLGRD---Y 310 ++ TR ++ + L VG+ A +G G D + Sbjct: 392 RMGTRLAHVLIDEFQDTSRDQWAAIEPLAVECLSRGGGLTWVGDVKQAIYGWRGGDSALF 451 Query: 311 IYLLSDLE------SSQELDAFVDVTPDNLLHNIQSDILE-------------------- 344 +L+ Q + + + + Sbjct: 452 DDILASPALTAIVPDPQRETLPRNWRSRAAIVRHNNTVFAQLDDPLRARGVLSAMLGDKT 511 Query: 345 ----LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQ--REVEVLHDRLLAMLE 398 L+ A + + + + H + + +L A+ Sbjct: 512 PDHVLDEAAASVARAFAGAAQEVPDRDSAQGGLVRIVPVHGEDNGDLRDKVRQQLRALFM 571 Query: 399 ED--PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 +D RD+ V+V D + D +P + HP++ ++ Sbjct: 572 DDLAARRPWRDVAVLVRKNDESAQVASW-----LMDWGVPVVTENSLRLADHPLVTQTVA 626 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 LL+ D + + + L GI D L Sbjct: 627 LLAFLDYPPNALALWEV-------------------LTGVELFGGISGLSDHALRDWLAD 667 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 G +L + A + L Sbjct: 668 RCARPADDPRGGKGLLADF---------------------RATFPVAWETWLAPFYARAG 706 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 + + E R + + A+ L+ Sbjct: 707 LMGPYDTVREIFERFRV------------AQRHPEDIGYVRRFLEVVHNAESRGLTSLAT 754 Query: 637 LRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN--DGVYP---RQLAP 691 + + +E++ V + T+ + + F VV + + D P Sbjct: 755 FLEFWVESGGEEKVPMPEAMDAVRVMTMHKSKGLEFPVVVIPFHHQPDRTDPPLVVAELD 814 Query: 692 LGFDLMSQKPKRGDRSR------RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS 745 L P+ GDR + +L +L+ + S Sbjct: 815 GQPLLAPLCPEMGDRYHHAQAAAAAEKLHLLYVGWTRPVDELHAYVTSTPFAE----RSS 870 Query: 746 VLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE 805 L+ + + G E + AR + ++ A+ Sbjct: 871 SLLAGVRALLTGCAIDTGQEYVAGVVPPARATDAHAGSD-----TEDTREAPRDEAAAQA 925 Query: 806 WLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 P A QA A P P P + R Sbjct: 926 APPDAPQAVPAPLPSPARAPAPGPLPGHAAAHAPDLPSPAAPW---RPMQWLPRLKIFRN 982 Query: 866 DTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGD------LPYGAFGEIFWET 919 E F R + L L ++ R A G +P Sbjct: 983 QLEEFTFTERRRGMLVHACLEQLRLTGTPDQDAARAVAHGMRAFPLPVPDPEATANELTA 1042 Query: 920 QCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWL-PQVQPDGLLRWRPSLLSVAQGM 978 + L I A + T + + ++ W+ S Sbjct: 1043 MLAWLAALPQAAHWFTHGVPEQSIMDAQGSIHRTDLMVDDGETCTVVEWKTGRPSDDHVA 1102 Query: 979 QLWLEHLVYCAS---GGNGESRLFLRKDG-EWRFPPLAAEQALHY 1019 Q+ + + G G + + DG R L A Sbjct: 1103 QVRRYLGLLAEATGRGPAGVRGVLVYLDGRTVRPVALRTADAAPQ 1147 >UniRef50_A1A303 Widely conserved ATP-dependent DNA helicase n=9 Tax=Bifidobacterium RepID=A1A303_BIFAA Length = 1356 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 54/476 (11%), Positives = 120/476 (25%), Gaps = 43/476 (9%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-----EQDVGNPLLASWGKLGR 308 P+ A R ++ + + LF++D VG+P + + G Sbjct: 312 PSIGATYRKRYTHVLLDEYQDTSTTQAALLTALFHADSTHRSAVNAVGDPFQSIYAWRGA 371 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN----------RAVAGVNIEEF 358 L+ DA + +LE N R + E Sbjct: 372 SPGA-FRMLQHDFGHDATDKPYTLTVTRRNSRMVLEAANNLTKPLRLPARRRGSSLMREV 430 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLT------PRD----I 408 + + ++ + +E++ + + +D + Sbjct: 431 DVPPLANIDNAPEGTLGVLGYATFGQEIDAIVRFAKQAIALHMPTENELADGAKDNRPHV 490 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSE 468 ++ + A L + + A P ++ ++LL + S Sbjct: 491 ALLFRSKTQ-----MPAYEDALEQAGLTTLVVGQAALLERPEIKDILALLHVVCDHTDSA 545 Query: 469 DVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL 528 ++ LL P D + + R + V P+ Sbjct: 546 ALMRLLATPRFGLSADDLQALAGIAERLNTAQRYRALVSAGIVEADANPSDADIRATVRA 605 Query: 529 TRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP----- 583 R + A+ + L + L + + +R P Sbjct: 606 YRDQVPNAVFLIDVLLRGDLRHLVDGVLSRTGAASVIHAGRVIQQVQRTAGHPLPEVVRT 665 Query: 584 -LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA----EGLGAQYGDAVPLSLLR 638 + +L A + A+++ L Sbjct: 666 AITALGLDIDLLLAERMRHPDAGNRATSHAASSLDAMLSLVDTYLQEIAAQGTPSLRAFI 725 Query: 639 DELAQRLDQERISQRFLAGPVNI--CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPL 692 + D + PV++ T+ + + + V ++GM DG +P Sbjct: 726 SWVDSLRDASDDNATAPDTPVDVVLMTVHQSKGLEWDAVAVVGMRDGTFPSSQGDH 781 >UniRef50_B0MQS6 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQS6_9FIRM Length = 1132 Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 87/830 (10%), Positives = 195/830 (23%), Gaps = 115/830 (13%) Query: 231 GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL--FRDSENAGQLFN 288 + + +HL + D K RQ + + + D + Sbjct: 143 AERLPVHLAEKMGDIAAVYSVYDKKLTEKYADRQDNLTLAAQVIRNGDSFDENTTIYIDG 202 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILEL--- 345 D L + G +++ L E+ E+ A D T + DI Sbjct: 203 FDSFSGAQQNFLRALADKGVNFVVALCTDENKAEVFATCDRTERLFERGNREDIKYTRLC 262 Query: 346 --ENRAVAGVNIEEFSRSDNKRPLDPLD-SSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 R G D IT S E + + + ++ Sbjct: 263 GKAPRYKNGNLKALRDFLQTGVKDSKADSDGITMAYSSSVSGEADFVCANIRKLV-RSEG 321 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 DI V+ A Y + + A A +P P+L F +LL D Sbjct: 322 YRYSDIAVICASPAKYKDAVNS----AAARYDVPVFADLPVPISEKPMLRFFEALLKAAD 377 Query: 463 SRF--VSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 + + V + + + + + + + E + + + + Sbjct: 378 NPTGTNILRYIRSGFVRLPSEKNNGKTVPMTLKERHLVEQHLMEEYAECWDLKRKKWDKP 437 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 + + + + + G L+ + + + Sbjct: 438 MPHITNASEQRVEEIRIATVTPLVEFAKSVRGIGG---------RELVKKFTAFL--FDK 486 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 C+D E + + ++ + L+ Sbjct: 487 VDISAAIQGKCQDNSTRQLRYVKELTEEYNQLWRTVSEMLTSLYETLDDTPLTLAEFSAL 546 Query: 641 LAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG--FDLM 697 + + IS+ V RS K V ++G DG +P F Sbjct: 547 IHSCASRISISRTPNVLDSVLFGDPARTRSREVKAVFVMGAADGAFPDIYPEGNSVFTSD 606 Query: 698 S-QKPKRGDRSRRDDDRYL------FLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 Q+ D +D+ +A+ A +KL+I++ + S + + Sbjct: 607 DVQRLAENDIELENDEARYSSAVLDAYKAMTLAGEKLFITFT------GEKENASEYIAD 660 Query: 751 LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAA 810 + G + + +++ D Q S + + Sbjct: 661 IAKRFGAELINVDNLDALYMTESVKSAEKQYVINSAQLTDGQKKAVEAVLSENEKEPSSI 720 Query: 811 SQAGK----------AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTE 860 + H + +++ F + + ++ Sbjct: 721 DRIKAVMSNNSGNSDIHRISDIAPIVFPQTALSPTAIEKLNGCKFAYFLRYGMNLS---- 776 Query: 861 DSEIPDTEPFILEGLSRYQINQQL----LNALVEQ---------------DDAERLFRRF 901 + + + I + + + D E+ + Sbjct: 777 -----SSAGIAMNASNYGNIMHYIMKYCFENMYDGARENGNPHVSDGRIKDLIEQALAEY 831 Query: 902 RAAGDLPYGAFGEIFWETQCQE-------MQQLADRVIACRQPGQSMEIDLACNG----- 949 R L F ++ +A + R E+ L Sbjct: 832 REKYLLTEENMSARFNTLYNALSVTAFYLIKYMAQELEKSRFVPSYFELKLESGKSENGF 891 Query: 950 ------------------VQITGWLPQVQ-----PDGLLRWRPSLLSVAQ 976 + + G + +V + R Sbjct: 892 DISPYSFDIELADKSRQTITVGGTVDRVDIAYDDDKSGGQIRVIDYKTGN 941 Score = 54.2 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 31/270 (11%), Positives = 74/270 (27%), Gaps = 17/270 (6%) Query: 1 MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI 60 M + A + +++ + ++LV + + + + ++I Sbjct: 1 MTHIITGPAGSGKTAALYELLKNDSKS-----RILLVPDQFVFESERRVAKETDEKTSDI 55 Query: 61 DFPLPASFIWDMFVRVLPEIPKESAFNKQS-MSWKLMTLLPQLLEREDFTLLRHYLTDDS 119 S + + P+ K + MS + L L + ++ Sbjct: 56 KVMGFMSLSESILKKHCPQKTYADTTAKTAIMSGAVRGLCGDLKFYGNAARKNGFVEMCL 115 Query: 120 DKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQL 179 + + +AD ++ P+ + L L E A ++ + + Sbjct: 116 SAVNELKAAGISADELTN-TLHSPE---KNTAERLPVHLAEKMGDIAAVYSVYDKKLTEK 171 Query: 180 GQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGK--HIEIH 237 R L + I +S ++I G + L+AL + Sbjct: 172 YADRQDNLTLAAQVIRNGDSFDENTT-----IYIDGFDSFSGAQQNFLRALADKGVNFVV 226 Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRH 267 L T+ + D + Sbjct: 227 ALCTDENKAEVFATCDRTERLFERGNREDI 256 >UniRef50_B8HWJ9 UvrD/REP helicase n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HWJ9_CYAP4 Length = 827 Score = 133 bits (333), Expect = 6e-29, Method: Composition-based stats. Identities = 93/723 (12%), Positives = 186/723 (25%), Gaps = 105/723 (14%) Query: 139 LVYRPDWLAQWETGHLVEGLGEAQAWQAP-LWKALVEYTHQ--LGQPRWHRANLYQRFIE 195 +Y P +L G + L + QA + L Sbjct: 96 GLYDPAYLNLERVGPTTDKLPQTLIRQAANRARRLNRDYKGELDNFDPEDFETYVSACKG 155 Query: 196 TLESATTCPPGLPSRVFICGISALPPV-----YLQA--LQALGKHIEIHLLFTNPCRYYW 248 L+ A LP A PP YL L + + L F + W Sbjct: 156 KLQYANLEGADLPDSALRVASQAQPPEAPLEWYLDFYQLYEQERIEQQLLTFDDMLLSAW 215 Query: 249 GDIKD-PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKL 306 + P L ++ +Q ++ + ++ + S VG+ + Sbjct: 216 ELLHRHPQLLTQVQQQQDTVLCDEYQDVNLVQADLLDLITASHRNYMVVGDDDQTIYSWR 275 Query: 307 GRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDIL---ELENRAVAGVNIEEFSRSDN 363 G D ++L + + I + A + Sbjct: 276 GSDCRFILDFADRY-----------GAKVFTITDNFRCGASHIALANRVIEHNRTRYRKR 324 Query: 364 KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQ 423 L H P+ E + +L ++ + +++++V P Sbjct: 325 LSLTRGLRGHTHLHPARHPRELAETVVKEVLQ--SQERGTSLAEMVILVRTYGQTPP--- 379 Query: 424 AVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARF 483 A + +PY + P + + L Sbjct: 380 --LEQAFLNAQIPYRVVGNLPFYRRPEILGLLKYL------------------------- 412 Query: 484 DITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG--QHTWRFGLTRMLLGYAMESAQ 541 L L Q G+ ++ R + G + Sbjct: 413 -----ELAQLEQRRLSEGLTPVEQGQWGACWLQIYNTPLRYIPRAVAEEIREGAVLAGEC 467 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 +Q + + + LA +L + L E + Sbjct: 468 LVYQLRKTTADQPEWLQRRLRELAQVLEWVLSQTETTPAASVLAELESRL--GYCRYLTS 525 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNI 661 ++ E + +A I G L + R + + Sbjct: 526 RSQAEETGQSRAENVRAAIQWSQGFGSVG-----EFLAHLQKL----EQPDRDQPHCLTL 576 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 ++ + + ++ V L ND V P+ R+ R+++R L AL Sbjct: 577 MSIHRAKGLEWETVFLPFCNDKVIPQ-----------------ARADREEERRLLYVALT 619 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQE--LIDYIGQSHYLPGDEALNCDESEARVKAH 779 +++ L++ ++ + S +QE + Q L + E A Sbjct: 620 RSRRDLHLLWL-------KDEPISPFLQESQCQRVLEQCQTLTRIYEHSPREWSAHDLVT 672 Query: 780 LTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQR 839 L L + P+ Q W A++ + +Q + V LE L+ Sbjct: 673 LVRLSPWLGL-PRYLSHYGEQP--PTWTAIAAERLQQVLRIIQTQGWETKLGVDLEQLEA 729 Query: 840 FWA 842 + Sbjct: 730 WEK 732 >UniRef50_A5CQ87 Putative ATP-dependant DNA helicase/nuclease n=2 Tax=Clavibacter michiganensis RepID=A5CQ87_CLAM3 Length = 1089 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 116/1083 (10%), Positives = 257/1083 (23%), Gaps = 206/1083 (19%) Query: 7 SNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPA 66 S R L L+ + + LD ++L S A L+ L+ + G+ Sbjct: 47 SGRTTTLRELVAERILAQGLDP--AEVLVLAPSRAAATRLRDELALRVGV---------- 94 Query: 67 SFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQ 126 + P ++ + ++ R ++ +L Sbjct: 95 -------PTLGPLARTATSVAFEVLA-------------------RRAAETGTEPPRLLT 128 Query: 127 LSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHR 186 + + DQ + D LA E + + +A +L Sbjct: 129 GAEQ-----DQII---ADLLAGHEELGTGPAWPDPLGVEVRRLRAFRTELRELLMRATEE 180 Query: 187 ANLYQRFIETLESATTC---PPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNP 243 E + +R + + + +L + + L + + + Sbjct: 181 GVRPDALAELGRAHDVPEWIAAAAFAREYEDVVDSFRGDHLDSAELLAEAVLLV------ 234 Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASW 303 + L + + + E + S G+P +A+ Sbjct: 235 -----------SRGEALTGIRLVVADDLHEATVATLSLLRALAARGADVVAFGDPDVAAA 283 Query: 304 GKLGRDYIYL-----LSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEF 358 G + L + L + L L + + Sbjct: 284 TFRGAEASALGRLSTVLGLPGLRTLVLDRVHRQPPALRALT----SAVTARIGAAGAGRQ 339 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSY 418 ++ + LD I + E+ L RL + ++V+V S Sbjct: 340 RQAGSAPGLDDDADPIQIIEAPTRALELARLARRLREEHLLG-GVPWARMVVLVRS-GSL 397 Query: 419 SPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPV 478 P + +A + A R LAL+ Sbjct: 398 VPQVARSLATAEVPTRMAVAGRALR----------------------DDLAALALIRAVD 435 Query: 479 LAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAME 538 + + +G G+D +R L L + G Sbjct: 436 VVLGRVPLTPDIAA----ELATGPLGGLDGVALRRLRLAMRQEELAGDGHR--------S 483 Query: 539 SAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD----- 593 S + +++ L L L L R + + +EE L + Sbjct: 484 SDELLVEALAAPGRLETLDLAPARRLGRLARTLQGARELASADGTIEELLWHLWEGSKLA 543 Query: 594 --MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA-QRLDQERI 650 + A ++ A + P S +EL + ++ + Sbjct: 544 KPWFEQALQTGIVADQANRDLDGVVALFTAARRFVERSPGRPASDFVEELLGAEVPEDTL 603 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMS---------QKP 701 S + LA V + T + ++VV + + +GV+P + Sbjct: 604 SPQPLADTVLVATPSAVVGAGYEVVAVAALQEGVWPNLRLRGSLLHPQRLSAVARGLDRA 663 Query: 702 KRGDRSR-RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ----------- 749 +R+ D+ + A+ A + + +S + PS ++ Sbjct: 664 DVDERAEVLGDELRMLALAVSRASRVVVLSATANDEE-----APSPFLRLVPPAPGIAEA 718 Query: 750 -------ELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 + + + D L+ ++ L +H ++ Sbjct: 719 EAGVESGRVAKDAPAALRIRPDHPLSLRGLVGALRRELAVVHRDAVLLDDGRVVSGDRTA 778 Query: 803 AREWLPAAS----------------------------QAGKAHSEFVQPLPFTLPETVPL 834 R + V V Sbjct: 779 RRAADATRERGRAAASALARLAAEGVTGADPAEWYGLREPSTTEPVVDLTDPEARVPVSP 838 Query: 835 ETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNAL------ 888 L+ F P+ F + + I ++ Sbjct: 839 SRLEAFERSPLNWFIDQ--------------ASGGSTSTAMGIGTIVHAVMEEASLDPEA 884 Query: 889 -VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSM-----E 942 + E GE + + ++ + G M Sbjct: 885 DLRPAALEERLDERWGELPFESPWVGERERRQAGELIAGVSGYLRDFEARGGRMLAAEGG 944 Query: 943 IDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRK 1002 +L ++ G + +++ + L + E + G + + Sbjct: 945 FELEVGVARLRGKIDRIELTEEGQVVIVDLKTGRHFPTRAEIPAHAQLGSYQLAYVEGSL 1004 Query: 1003 DGE 1005 + Sbjct: 1005 EQV 1007 >UniRef50_C7MBM5 DNA/RNA helicase, superfamily I n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MBM5_BRAFD Length = 1058 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 91/888 (10%), Positives = 197/888 (22%), Gaps = 96/888 (10%) Query: 163 AWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGL---PSRVFICGISAL 219 A Q L L+ A F L T L P+ + G Sbjct: 129 AEQDALLAELIAQREAWHLEVDPGARTLPGFRTELRDLITRAAELGLTPADLEELGHERG 188 Query: 220 PPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTR---------QRRHSFE 270 P + A L ++ + L + + A + + + R + Sbjct: 189 RPAWADAAAILRDYLGVLDLEASAALDAGPRLDSGALVRRAVRLLADPSTPAPFRAVVVD 248 Query: 271 DRELPLFRDSEN-AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV 329 D + + A P A G L D V Sbjct: 249 DAQDLTAAGIDLVAALAAAGARVLVCACPDTAVDTFRGA-----LPDAADRLHTLLPRPV 303 Query: 330 TPDNLLH-NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEV 388 L + Q+ L A+ G + ++++RP P ++ P E + Sbjct: 304 EAMVLDGAHAQTAPLTAAVDALRGRLPLAGAPAESRRPRAPRPGALVTLRAQDPLDEARL 363 Query: 389 LHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR-RARQS 447 + L + + D+ V+ + + + LP + R + + Sbjct: 364 IGSALRDLHHR-EGVQYDDMAVVCRSGAAVAD-----LADLLSRTGLPVRVPRRPQPLRE 417 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID 507 P + + +L + + + L +L F + + + R Sbjct: 418 VPAIADLLRILEIGLAPQDAPLDPRLA-TELLRGPFGDADTLRLRRIRRLLLGAHRAA-- 474 Query: 508 DDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASL 567 P + + + ++ E + Sbjct: 475 --------EPDSETPSEQLLARALVDEEVPGLPAPEARDRAAAPIHRVREMIRAVREHPE 526 Query: 568 LMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQ 627 + W + A+ ++ + A Sbjct: 527 ADAQQVLWHAWNASGLAGGWRRAALGSAGDVDGARSRLAASR--LDALLELFAAAERLTD 584 Query: 628 YGDAVPLSLLRDELA--QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVY 685 L +++ ++ G + + T + V L + +G + Sbjct: 585 RRPGAGALELVEQIRGQAVVEDTLAPAAAARGRLAVLTPAQLAGEHRDTVVLARLQEGAW 644 Query: 686 PRQLAPLGFDLMSQK-------------------PKRGDRSRRDDDRYLFLEALISAQQK 726 P ++ D+ L + AL A+++ Sbjct: 645 PDLRLRSTLFGAAELQLRAGARRGAELPIEPEAVRALQREQVIADELRLAVSALARARRR 704 Query: 727 LYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 + ++ + + + PS L + + + + Sbjct: 705 VLVTAVQ-----DEQNEPSALFEAFEGMAADPWIDLETLRRDPGPAPDARRLVAALRRRL 759 Query: 787 MPFDPQ-----NYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFW 841 DPQ + S P + L+R Sbjct: 760 RGEDPQTVRDAALALDALGRAGAPGTDPGRWYHQEPSSTAPLHEDDTPIRLSPSALERAV 819 Query: 842 AHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRF 901 P + I L Sbjct: 820 DCPQSWLMERAGGTRAGGPAQLI-------------GTALHHLAQVHPRGPADAEEDLLA 866 Query: 902 RAAGDLP-----YGAFGEIFWETQCQEMQQLADRVIACRQP-GQSMEIDLACNGVQITGW 955 L G + LA + + +P ++ VQ+ G Sbjct: 867 ELHTLLRAVPGTETWSGRRRVRRAEDAARLLAAHLRSAGEPLAVEAPFEVELGRVQLRGS 926 Query: 956 LPQVQPDGLLRWRPSLLSVAQGMQLW------LEHLVYCASGGNGESR 997 + +++ D L + + L+ Y A+ G Sbjct: 927 IDRIEGDPTG-LHVVDLKTGRAAKSAAKAEEDLQLAAYQAAVREGALT 973 >UniRef50_A5TXD7 ATP-dependent DNA helicase n=8 Tax=Fusobacterium RepID=A5TXD7_FUSNP Length = 919 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 54/589 (9%), Positives = 147/589 (24%), Gaps = 92/589 (15%) Query: 169 WKALVE---YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQ 225 ++ + Y + W +++ + I L + + + Sbjct: 136 YQKFFDNLSYNENKYRSDWQKSSFLRNKINDLNENAIDIESVQTS---DIYINFIKSTYK 192 Query: 226 ALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQ 285 + I + + + +L K+ ++ + + Sbjct: 193 LYEKQLFENNIVDFSYLQVEFLNMLLNNADFLEKINNHFDYIMVDEYQDSNKIQEKILLS 252 Query: 286 LFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQE-----LDAFVDVTPDNLLHNIQ 339 + + VG+ + + G +L+ + E + + Sbjct: 253 ISKNKKNICVVGDEDQSIYRFRGASAENILNFSKHFGEGECKLIVLEENYRSV------- 305 Query: 340 SDILELENRAVAGVNIEEFSRSDNK---RPLDPLDSSITFHVCHSPQREVEVLHDRLLAM 396 +DI+E N+ + ++ N R + L S+ + + + + Sbjct: 306 NDIVEFNNKWINAIDWHGNRFEKNIVSMRLDNILSKSVFHISGSTLDENIRNTVTFIKKL 365 Query: 397 LEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFIS 456 + + I V+ + A + + ++ Sbjct: 366 KQSNKITNYNQIAVLF---SHFKDRSAKKLEDALKKENIEVYSPRTKVFFEMYEVKLTFG 422 Query: 457 LLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELEL 516 ++ ++ E+VL + L + +L + + Sbjct: 423 VILACFKKYFPEEVLDTYLLECLDLARLEIRKDNEFL-------------AWIKEKIENI 469 Query: 517 PATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRR 576 ++ +L ++ E + A +LA L +++ Sbjct: 470 SEYSFNSLNEIFYELLSFSYYKNV---------LKEEGPIEARANHNLAILSKIFKNFQK 520 Query: 577 GLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 + ++ + Sbjct: 521 YVHSKKI--------------------------------------SIEDDFSIIKYFFTK 542 Query: 637 LRDELAQRLDQERISQR-FLAGPVNICTLMPMRSIPFKVVCLLGMN-----DGVYPRQLA 690 + L Q E S+ + + T+ + + F VV + + G RQ + Sbjct: 543 YLEILKQSRVDEIFSEEDYPNDCIPFLTIHQSKGLEFPVVIVFSLYSKPNVSGDLSRQTS 602 Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 + K ++ D R F A A+ L +S + + +N Sbjct: 603 IDRLINSNSKISEIEKEYFDFYRK-FYVAFSRAKNLLVLSCYEKGVSEN 650 >UniRef50_C4L3Q8 Recombination helicase AddA n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L3Q8_EXISA Length = 1205 Score = 132 bits (331), Expect = 9e-29, Method: Composition-based stats. Identities = 91/895 (10%), Positives = 191/895 (21%), Gaps = 170/895 (18%) Query: 192 RFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDI 251 +E++ L V G + +A L D Sbjct: 320 DLLESVSMQQPLVETLVRTVRAFGQAYEQAKRDRAFVDFSDLEHYALAI------LRQDG 373 Query: 252 KDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG----EQDVGNPLLASWGKLG 307 A R ++ + + N VG+ + + Sbjct: 374 GPSDVAALYKERFAEVLVDEYQDTNEIQETIINLVANEREEIGNLFMVGDIKQSIYRFRH 433 Query: 308 RDYIYL------LSDLESSQELDAFVDVTPDN-LLHNIQSDILELENRAVAGVNIEEFSR 360 + + + +D + + +L+ I ++L + V + +E ++ Sbjct: 434 AEPGLFIDKATRFRQANTGKRIDLSQNFRSRSEVLYGINDLFVQLMDEEVGEIAYDEAAQ 493 Query: 361 SDNKRPLDPLDSSITFHVCHSPQREV-------EVLHDRLLAMLEEDPT----------- 402 R +P+ + F + RE+ + R+L ++ D Sbjct: 494 LVPGREYEPIPADPEFILVDGASRELSKQEVEGRAIATRILELVSGDEPFKVTDESTGQL 553 Query: 403 --LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSL 460 RDI+++V + +P + ++LL + Sbjct: 554 RNCEYRDIVILVRSKKERVEQLM----DILTQYNIPAYTDSDGGYFQATEIRMILALLKV 609 Query: 461 PDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATG 520 D+ + L P+ Sbjct: 610 IDNPLQDIPLAGALRSPMFRFD-------------------------------------- 631 Query: 521 QHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQ 580 L +ES ++++ + EL +L +L+ WR Sbjct: 632 --------DGELARIRLESEDSFYEALKAKADDDD---ELGVKCGEMLDRLSRWRTYARN 680 Query: 581 ERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 E + D F + + Y + D Sbjct: 681 HSLSELIQQLFNDTGFYDFSGGLPGGKGRQENLKALYDRALAYERSGYRGLYRFLRVMDR 740 Query: 641 LAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN---------DGVYPRQL 689 L + E S V I T+ + + F V + + V + Sbjct: 741 LQDTGEDLSEARSLGDEENVVRIMTVHKSKGLEFPVTIVAQLGKQFNKRDQMQRVIFHKQ 800 Query: 690 APLGFDLMS-------------QKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSI 736 + D + + D + + ++ + AL A++KL + Sbjct: 801 YGISLDAIDVVTRTKSETFVKEMIRRDLDATMKAEEMRVLYVALTRAKEKLILVGTVGEP 860 Query: 737 Q-----------------DNSERFPSVLVQELIDYIGQSHYL----------------PG 763 + R + + + + Sbjct: 861 LKHLQQWLQVGQSGDLLASEARREAKTYLDWIAPALLRLPSATSFIESFGFTVPSTFQES 920 Query: 764 DEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQP 823 + EA + T E + E+ Sbjct: 921 TSWIYRVIGEADLAEIATLQEMMAQLHHVQRFEAIDFPIQNEEETIRAVKRALTYEYPAR 980 Query: 824 LPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQ 883 + L+R AF P G R Sbjct: 981 DAVRTAAKQTVTELKRAMQLEQAAFEDPV---RPIDTPYREPKWRQVKQTGAERGTTLHL 1037 Query: 884 LLNALVEQDDAERLFRRFRAAGDLPY----------GAFGEIFWETQCQEMQQLADRVIA 933 + ++ G L F Q + +R A Sbjct: 1038 IFQLADPNQPIVDQINQWEMQGMLSPVEAETARLAIPDIEMFFQTEVGQALADALERGTA 1097 Query: 934 CRQPGQSMEI---------DLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ 979 R+ + + V I G + + DG Sbjct: 1098 WRELPFTYTVPAERVNPDGHFTDEHVLIQGIIDCLYFDGDSYVL-LDYKSDAVTH 1151 >UniRef50_Q6AFN4 ATP-dependent DNA helicase n=2 Tax=Actinomycetales RepID=Q6AFN4_LEIXX Length = 1043 Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 106/916 (11%), Positives = 220/916 (24%), Gaps = 112/916 (12%) Query: 125 FQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGL--GEAQAWQAPLWKALVEYTHQLGQP 182 FQL+ + A + P L E ++ L G+ + PLW + + Sbjct: 110 FQLARERAR---RTGEEPPRLLTGGEQDRIIAELLAGQLEDGTGPLW---PDVLGPEVRS 163 Query: 183 RWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTN 242 + I P L I G + A + ++ + + Sbjct: 164 LRGFRTELRELIARCAERGVSPARLSELGTITGREG----WRAAAGFIAEYQSVLDSYRG 219 Query: 243 PCRYYWGDIKDPAYLAKL---LTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNP 298 I + + L R +D + L + G+P Sbjct: 220 RFVDAAELIASAVAIVRDGSPLDCLRAVFVDDLQEATVATVALLRALASRGVAIIAFGDP 279 Query: 299 LLASWGKLGRDYIYLLSDLE----SSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN 354 +AS G + L +L + + + E A AGV Sbjct: 280 DVASTAFRGAEATALGQLGARLGVPVTRFVLATAHRQTPVLRELTARMTERIGTAAAGVQ 339 Query: 355 IEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVAD 414 + + S R L + ++ V+V Sbjct: 340 RVASAGRGEPERTGGTRPEVVIISAVSTPS-EAARLARRLRERRLLDGVPWGEMAVVVRS 398 Query: 415 IDSYSPFIQAV-FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLAL 473 +A+ P + RA + I+L Sbjct: 399 GAHIPGLARALAVAEVPTKTSI-----AGRALRDVFAARQLITL---------------- 437 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLL 533 A ++ L R G G+D ++R L L + Sbjct: 438 -------AGIEVGALELTPERAAELLLGPFGGLDSISLRRLRLALRQ--------EELAS 482 Query: 534 GYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRD 593 + +++ + + + A L L R A +EE L + Sbjct: 483 DGNRAADDLLVEALADPARLATIDSSPARRAARLAETLRSGREKAATGSTIEELLWHAWE 542 Query: 594 -------MLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR-DELAQRL 645 + + A ++ A + P S + L + Sbjct: 543 RSGLARRWMEQSERSGIVADEANRHLDGVVALFTAARRFVERFPERPASDFVVELLGADV 602 Query: 646 DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD 705 ++ ++ + V +CT F+VV + + + V+P + D Sbjct: 603 PEDTLAAQTAGDAVLVCTSSATIGREFEVVAVARLQESVWPNLRLRGSLLHPQELGSALD 662 Query: 706 RSRRD----------DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 + + D+ +F A+ A+ ++ ++ + PS + L + Sbjct: 663 GRKTETEDQRAQVLGDELRMFALAVSRARGQVLLTATVNDDE-----QPSPFL-RLAGEL 716 Query: 756 GQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 L+ R++ L A Sbjct: 717 AAPDTEDSIHPLSLRGMVGRLRRRLVTTGAPEAAAALARLADAGVEGADPADWYGLAEPT 776 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGL 875 V + L F P+ F E + P + + Sbjct: 777 TEEPLVDLTDPEAGVRLSPSRLGTFEKSPLAWF---------VEEMAASPSSLTAGI--- 824 Query: 876 SRYQINQQLLNALVEQDD---AERLFRRFRAAGDLPYGAFGEIFWETQCQE-----MQQL 927 + ++ + + +L + + E + + Sbjct: 825 --GTVVHAVMEEASATGEFGVDALWAGIEQRWAELAFESPWVEERERRRTRGLVGGVSDY 882 Query: 928 ADRVIACRQP--GQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ------ 979 G E +L +I G + +V+ L + + Sbjct: 883 LRDFERAGGRLLGSEGEFELRLGRARIGGKIDRVEATPDGTVVLVDLKTGRTVPSAAETA 942 Query: 980 LWLEHLVYCASGGNGE 995 + Y + +G Sbjct: 943 SHAQLGAYQLALEHGA 958 >UniRef50_Q1W555 UvrD/REP family helicase n=1 Tax=Pseudomonas aeruginosa RepID=Q1W555_PSEAE Length = 760 Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 79/621 (12%), Positives = 165/621 (26%), Gaps = 95/621 (15%) Query: 219 LPPVYLQALQALGKHI---EIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELP 275 + Y++A + +H ++ ++ PA + R ++ + Sbjct: 167 ITQGYVEAFRLYEEHRAQLKVRFFEDQLYDPVKLMLRQPATQRYVQNRVDHLIVDEAQDM 226 Query: 276 LFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL 334 L VG+ A + G + YL + F P+ Sbjct: 227 NGIQIALLKILAGDRAKVMLVGDEDQAIYDWRGAEPDYL---------IRGFEQDFPEAT 277 Query: 335 LHNIQSDIL--ELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCH---SPQREVEVL 389 + + + + A + V +R+ H E + Sbjct: 278 RYTLPHTFRFGHMLSIAASQVISCNTNRNPKISISAEGTPRTRIHCLPLALGLADLGEHV 337 Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 +RL L +DI V+V D + R +PY + R P Sbjct: 338 AERL------TSGLKLQDIAVLVRTYD-----LSVTLELDLHQRGIPYHVYGRPPLMRIP 386 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 + A + +L L R+ + LR + R + D Sbjct: 387 EISALLGVLQLASGRWKTL--------------------DANQLRYVIKSLMYRPTLYLD 426 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 + + + +++ + + + ++A +L Sbjct: 427 KAAINRVVELVVRQPECLVEAIRSTITLQTKDYQANQIRDRADLLEILATATDPQDKVLT 486 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 L+ + ER +E+ P A+ AA+ Q ++ I + G+ Sbjct: 487 VLDRYLLATEFERNIEK------------QSPTADQAAAVMANVQAFRLIASRHEGS--- 531 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 + D + +D + V I ++ + + V + G+ +PR Sbjct: 532 ----IDAFLDSIDPLIDSSAMEP-PTTPHVWISSIHRAKGAQWSRVFVPGVVRSGFPRDD 586 Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP----- 744 + +R LF A+ A +++I++ S P Sbjct: 587 LS--------------ADEIEAERRLFYVAITRAVDEVFIAHPNDLEFQRSLERPDITET 632 Query: 745 -------SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG 797 S + E+ + + +E E PF Sbjct: 633 HPETSSVSRFLWEMDIALARHAGAAVEEGRFAALGEVDRPEVANTYFATFPFSKDWRYAK 692 Query: 798 ERQSYAREWLPAASQAGKAHS 818 Q + A A Sbjct: 693 RPQPPSPASAGANHDVVGAAK 713 >UniRef50_C7HA04 ATP-dependent exoDNAse beta subunit n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HA04_9FIRM Length = 1233 Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 86/834 (10%), Positives = 182/834 (21%), Gaps = 137/834 (16%) Query: 261 LTRQRRHSFEDRELPLFRDSENAGQLFNS--DGEQDVGNPLLASWGKLGRDYIYLLSDLE 318 ++ + L + D VG+ + + D L+ Sbjct: 415 RQNYAAVMVDEYQDTNALQDALYRCLASPAGDDLFLVGDLKQSIYRFRQADPSIFREKLD 474 Query: 319 SSQELDAF-------VDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKR------ 365 S L + + + ++ + E S Sbjct: 475 SWPALPGGAARPRPAEGTPGTDAMLALDANFRSAPQVVEGINFLFERLMSPELGDTAYGD 534 Query: 366 -------PLDPLDSSITFHVCHSPQRE--VEVLHDRLLAMLEEDPTLT---------PRD 407 S+ H E + R+ +++ + D Sbjct: 535 GQRLICGAPGEYTGSVEAHFLPDDTAETDAGWIARRIEELVQSGEPVRDGSATRPVQYED 594 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 +++A + ++ A R +P R P + I+LL + D+ Sbjct: 595 CCILLAARIDFPAYV-----EALTARGIPVYADARENLLDAPHIRPLIALLKVIDNPAQD 649 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 + A + P+ T++ L LR E + G + L Sbjct: 650 IYLAAAMLGPLFG----FTDDDLVRLRARAEEIQKQQGENAPQRISLY------------ 693 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 L +SG G + + +L RR + Sbjct: 694 ------------------GALLLTVNSGEDTPFTGKVRAFYARLTELRRMARSVPAEQLL 735 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 + L E A +++ + A V LA Q Sbjct: 736 EEIFASTGYLAALGVMENGARRREDARRFASFCAGAGSGGISALVRAIDAAA-LAGSTGQ 794 Query: 648 ERISQRFLAGPVNICTLMPMRSIPFKVVCLLG------MNDGVYP---RQLAPLGFDLMS 698 + + G V + T+ + + F VV + D P ++ G L Sbjct: 795 DTVPGGSRPGCVTVMTIHRSKGLQFPVVFVADTARRFNAADTRQPVLLHRMYGAGLRLRP 854 Query: 699 QKPKRG-------------DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE-RFP 744 ++ + R + L AL AQ KL ++ + ++ Sbjct: 855 EEGEGAYKTAAYTALSNVHAAEMRSEQMRLLYVALTRAQDKLILTVPLGIGKTSNPFTRA 914 Query: 745 SVLVQE------LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE 798 + ++ + +L ++ + R A L + Sbjct: 915 AAFLEAGAGQTLCRQANSFADWLRAALLVHPNGGPLRRLAEDLELPFADTGSTITLTVQQ 974 Query: 799 RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFR 858 E + P + + + Sbjct: 975 ALPEGVEPPDPEPEERPLAQADPALTEALRQGFAWQYPAAELARVPAKVSVTGIVHKAEQ 1034 Query: 859 TEDSEIPDTEPFILEGLSRYQINQQLLNALVE------------QDDAERLFRRFRAAGD 906 T L L + R A Sbjct: 1035 TTLERPGFLAKDGLTAAEMGTALHAFLEHADFAALAAAKQAGTLETAIPAERDRQVEAKL 1094 Query: 907 LPYGAFGEIFWETQCQEMQ-QLADRVIACRQPGQSMEI---------------------D 944 ++ + ++ + R+ A + + ++ Sbjct: 1095 TAPEIAEKLDAGRIRRFVESEAFARICAADEVLRELDFITALPAAEVLTAQGTDSADSAA 1154 Query: 945 LACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL 998 +A V + G V + Y A + Sbjct: 1155 VAQAKVLVQGIADLVLV-FPNHLELLDYKTDRRKSEDDFLAAYRAQLDLYALAI 1207 >UniRef50_C8WFT6 Double-strand break repair helicase AddA n=3 Tax=Zymomonas mobilis RepID=C8WFT6_ZYMMN Length = 1162 Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 102/1032 (9%), Positives = 219/1032 (21%), Gaps = 212/1032 (20%) Query: 85 AFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPD 144 AF ++ + + + + L+ + + D F L + A+ +++ Sbjct: 204 AFAFNNLGVAIESRVKRALDLPFSDINQALEEACDDDHFDFALLRQIAEANEKWDTATAH 263 Query: 145 ----WLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESA 200 + + + L +Q+ + E A Y+ ++ L A Sbjct: 264 KNLAIIQDFVAASPADRLASLGDFQSLILTQKGELKKAPTGITKKIAPEYEEWMIALSKA 323 Query: 201 TTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAK- 259 L R S L+ QA + + + + I+ L + Sbjct: 324 IHQIISLKKRH---EFSQFAIAALRTGQAYSQAWQQT-KKESGLVDFNDMIETSVALLRT 379 Query: 260 ----------LLTRQRRHSFEDRELPLFRDSENAGQLFNS-------------DGEQDVG 296 L ++ + L VG Sbjct: 380 PGIGEWVRYKLDRTTDHILVDEAQDTNIFQWAIISALAEDFFSGESAKSVETSRSIFAVG 439 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVN-- 354 + A +G G D + + + + L ++ Sbjct: 440 DFKQAIYGFQGTDPQAFVDARDYFNDKS--QGSGREILDLSLNRSFRSTPPILAIVDQML 497 Query: 355 -----------IEEFSRSDNKRPLDPLDSSITFHVCHSPQRE------------------ 385 I + + ++ L S+ S +E Sbjct: 498 ADIESSCGGIGISQQALQPHQSARSDLGGSVVLWQPISDYQEEGENTSEETDADDEEQLE 557 Query: 386 ------VEVLHDRLLAML---------EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAP 430 L ++ L PRDI+++V + + I Sbjct: 558 NGELELAIRLARQIETWLNPKTPLYLPALGRNAAPRDILILVRNRGRLASLIVGC----L 613 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 + +P A DR + + +S + + LL P++ Sbjct: 614 HAQKIPVAGLDRLTLTAPLAVSDLLSAIRFVLQPDDDLTLACLLVSPLIGW--------- 664 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 + L A + R+ A + + L Sbjct: 665 -------------------DQERLYRLAAKRAKKESLFDRLRKSEAEKETWDVIRGWLSK 705 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 + L L+ L +E Sbjct: 706 ADFITPYRFLEMLLSGKGEGRRKLLERLGEEA---------------------------- 737 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSI 670 ++ L + D + + V I T+ + + Sbjct: 738 --RDPINELLNAALLLESETTPSFQRFLDWFDSGDVEIKRDPSVRQNTVRIMTVHGAKGL 795 Query: 671 PFKVVCLLGMNDG------------VYPRQLAPLGFDLMSQKPKRGDRSR---------- 708 VV L +P A + S S Sbjct: 796 QAPVVILADATRDPHQSNGFRKEIITWPLDEANAPIPMPSNDDIAYLPSDFGDIINEKKA 855 Query: 709 --RDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEA 766 + L A A++ L I+ S N S A Sbjct: 856 KGLQEHWRLLYVAATRAEEYLVITGHLGSRAKNIPPKDSWYAC----------------A 899 Query: 767 LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPF 826 + + + + + + P + +E + Sbjct: 900 TRAITAMGIAWQEDAMWQQKAVYHWEGRKKVTDIPKKQPTFPKEAMPSWIKNEIPEEPKP 959 Query: 827 TLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLN 886 P + L + + PD + R + L Sbjct: 960 AYP--LRPSDLVK------------------DNTSNPPPDGG--SITAAKRGTLLHALFE 997 Query: 887 ALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLAD----RVIACRQPGQSME 942 L E + + G + ++ R I + Sbjct: 998 RLP-MLPVEEREKAGLRWLETSAGVKDAALRNSLIKDACDAMSNPVYRDIFSEKALAEAP 1056 Query: 943 IDLACNGVQITGWLPQVQPDGL-LRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLR 1001 I I+G + ++ D R + + E + + + Sbjct: 1057 IAAKVGEHVISGTVDRLWIDRDKKRVHIVDFKTGRRVPATKEQ--VSEAYQRQLAAYVVA 1114 Query: 1002 KDGEWRFPPLAA 1013 + + + A Sbjct: 1115 LEKIFPDYAIEA 1126 >UniRef50_A5Z8R6 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8R6_9FIRM Length = 660 Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 55/507 (10%), Positives = 136/507 (26%), Gaps = 100/507 (19%) Query: 228 QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF 287 Q+L + + + + P L + ++ + + L Sbjct: 193 QSLMDYDDQMVYAYTMLKT------TPQVLEYFQNMYQYICVDEAQDTSKIQHKIIEILA 246 Query: 288 N-SDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE 346 + VG+ + +G LLS F P+ + ++ + Sbjct: 247 MKNKKLFMVGDEDQSIYGFRAAYPEALLS----------FESTYPEGKILLMEENFRSDG 296 Query: 347 NRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTL 403 A + N + + I + + + L + E+ + Sbjct: 297 AIVSAADRFIQKNKLRHKKNMKASRDMVKDIRLIEVKTRKSQYSYLTK-----VAENCNV 351 Query: 404 TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAI-SDRRARQSHPVLEAFISLLSLPD 462 D V+ D +S P + + Y I + +H ++ +++ + Sbjct: 352 ---DTAVLYRDNESIIPVV-----DMLERSGIDYKIKNADLTFFNHKIVTDIKNIIRFAE 403 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + +E + + E R Sbjct: 404 NPKDTEIFMQIYFKIGTYLSKMGAIEACR------------------------------- 432 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 + E S L Y + L + + +E Sbjct: 433 ------------ISEEKGIPVIDSALRYGRIPKGTEKS-------LKAMKTHIESILEES 473 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 + + M + +L A+ + I Q A + + L Sbjct: 474 AYKAVYRIVNFMGYSAYLERAKIKDGKISILQALAA-----------NEKTPEDFLNRLD 522 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 + + + + T+ + + + V ++ + DGV+P ++ + ++ K Sbjct: 523 ELAMIIKNKKNNYDCKFTLSTIHSSKGLEYDTVYIMDVKDGVFPEKVVANRKNATDEEIK 582 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYI 729 +++R L+ A+ A+ +L I Sbjct: 583 -----TYEEERRLYYVAVTRAKNQLCI 604 >UniRef50_Q2YB41 DNA helicase/exodeoxyribonuclease V, subunit A n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YB41_NITMU Length = 1196 Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 90/861 (10%), Positives = 191/861 (22%), Gaps = 162/861 (18%) Query: 197 LESATTCPPGLPSRVFICG-------ISALPP---VYLQALQALGKHIEIHLLFTNPCRY 246 L + LP + G I+ L P L+ + ++ + R Sbjct: 360 LRQSLHDIRLLPPPAYTEGQWKILGSITRLLPYAVAQLKLVFQQHGKVDFTEVAQAALRA 419 Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL------FNSDGEQDVGNPLL 300 L R R ++ + E +L + VG+P+ Sbjct: 420 LGDPEAPTDLALALDYRIRHLLIDEFQDTSISQYELVTKLTTGWEPGDGRSMFVVGDPMQ 479 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR 360 + + + L + + + + Q I++ N A V + + Sbjct: 480 SIYRFRQAEVGLFLRARAAGFG-NVTLGPVSLSANFRSQRGIVDWVNATFASVMPQRENI 538 Query: 361 SDNKRPLDPL--------DSSITFHVCHSPQREVEVL-HDRLLAMLEEDPTLTPRDIIVM 411 S P D +++ H + E ++A + D ++ Sbjct: 539 STGSVRYSPSVAVRTALPDPAVSVHPFFNDDHGAEGAKVVEIVARAQRDENC--STTAIL 596 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 V + + + L + + PV++ + L Sbjct: 597 VRNRSHLAEILPR-----LKKAGLRFRAIEIEGLGRQPVVQDLLVLTRALMHPADRLAWF 651 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 ALL P + D + P G + Sbjct: 652 ALLRAPWCGL-----------------------TLADLHALVSAAPDQSDEASAPGTVQE 688 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 A W+ + + + + A+ L + L ++ Sbjct: 689 GEENAGPGRGTVWEWLQDENRIAFVSADGYERLLRVRNVLKACMANRNRQS----LRATV 744 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 A P + A + A + + L + L Sbjct: 745 EAAWLALGGPACLEDEAG------LEDASAYLDYLESHEEAGSIRSLAALEEGLTGLSAL 798 Query: 652 QRFLAGP-VNICTLMPMRSIPFKVVCLLGMNDGVY------------------------- 685 A + I T+ + + F V + G+ Sbjct: 799 PDAKADGTLQIMTIHKAKGLEFDCVIVPGLGRLSRSDEKKLFMWMEHLRDEWPETEEEES 858 Query: 686 ---------PRQLAPLGFDL-MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI---SYI 732 P Q G D S K D +D L A A+++L++ + + Sbjct: 859 GGRNDLLLAPIQETGSGSDPIYSWIEKLDDEKECLEDGRLLYVAATRARKRLHLLGSTGV 918 Query: 733 GRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQ 792 + +E P + L + A D + Sbjct: 919 ISGNEGGAELRP-----------PPARTLLSKIWPAVESFYREAAAKAVFSDPASCGDNK 967 Query: 793 NYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMR 852 + ++ + S + Sbjct: 968 EQEARDKPVIDQSLRRLVSGWELPPAPRALQWEAGPSP---------------------- 1005 Query: 853 LQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE-------RLFRRFRAA- 904 + E E I + L + E A+ L FR Sbjct: 1006 --LPPWREVEYSWAGET----ARLVGNIVHKWLQRIAEDGLADWNAARIIDLRDVFRRQL 1059 Query: 905 --------GDLPYGAFGEIFWETQCQEMQQLADRVIAC--RQPGQSMEIDLACNGVQITG 954 G + + + R + ++ + + G + Sbjct: 1060 IACGAISTGKDDSDVAVKRVMAALTHAVSEPRGRWLLGPQQEARSELRMTGHIGGQYMDF 1119 Query: 955 WLPQVQPDGLLRWRPSLLSVA 975 + + D + + Sbjct: 1120 VIDRTFRDVAGQRWVVDYKTS 1140 >UniRef50_A2ST32 ATP-dependent nuclease subunit B-like protein n=1 Tax=Methanocorpusculum labreanum Z RepID=A2ST32_METLZ Length = 915 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 75/680 (11%), Positives = 178/680 (26%), Gaps = 94/680 (13%) Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS-----AP 430 + + E+ + + A++ + + P+DI ++ + S P + + Sbjct: 205 VYQYTDTRTELRSALESIAALI--ESGVPPKDIALLTPSLPSALPLLDELVPDFSVLLEG 262 Query: 431 ADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGL 490 R L + + ++ P + ++ L+ +D+ +++ P + + D Sbjct: 263 TRRPLGFFAGEDIPIENLPPVRCALAWLAAFAFDCRIDDLKIIIESPYFSLKKDWLTA-- 320 Query: 491 RYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY 550 + + G+ WR R+ + Sbjct: 321 ---------------GRLEKAGIITKTEKGRAAWRTVAERL--------------AAARK 351 Query: 551 DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMT 610 E A L LL +L+ L L + L+A + + Sbjct: 352 KEIGEHDAAFQASLDRLLDRLD---ENLEHTGTLAGHCRALKADLSALGWTKIQMKPQDE 408 Query: 611 LIEQQWQAIIAEGLGAQYGD-AVPLSLLRDELAQRLD-QERISQRFLAGPVNICTLMPMR 668 + ++ + + + + L++ + +IS L + Sbjct: 409 AARHAFLRLLDKLALTSLAEVSYTVREFYAMLSRFCEKTTKISYPESKHAFFAGDLRSVA 468 Query: 669 SIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD---RSRRDDDRYLFLEALISAQQ 725 V + G++ PR A + + + ++ D RY F A ++A++ Sbjct: 469 GTKRPYVFITGLSADRIPRIEAAIPLLNAQETARIQPDRVQNLLDASRYYFHAAGLAAEK 528 Query: 726 KLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHT 785 +L +S G + PS + L + +S + A Sbjct: 529 QLILSCAGHDGE--KSLTPSPYLTRLAEPEPKSPGFLAHSMTANQTRAGELLAAGRENEC 586 Query: 786 R----MPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE--TVPLETLQR 839 +P + ++ R P A A + E L+R Sbjct: 587 EGLFGIPSLETAAEIIGIETVDRTGTPGIYDAEFAGDGIAEAFAAAYTEKTEFAPTVLER 646 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFR 899 + P + + L++ + F E + + + + + + Sbjct: 647 YRECPFKWYLADHLRLENPAD---------FSAERIIVGTVMHKAMERFFREYMSPLTEE 697 Query: 900 RFRAAGDLPYGAFGEIFWET--------------------------QCQEMQQLADRVIA 933 A + E F + Sbjct: 698 NESDAAEFLKKLVTEEFKNRHIKTPSWQSMLNGYLGNGGLESSCDLIIRLETGFYAAGFR 757 Query: 934 CRQPGQSMEIDLAC---NGVQITGWLPQV-QPDGLLRWRPSLLSVAQGMQLWLEHLVYCA 989 ++ + +TGW+ +V + + + W E A Sbjct: 758 TLPEWLEQKVTAEIPGGDPFTVTGWVDRVMFNEQTKEFAVVDYKTGNV-KTWKELEEGSA 816 Query: 990 SGGNGESRLFLRKDGEWRFP 1009 + + G P Sbjct: 817 LQIPLYTEAVRQMTGCSPLP 836 >UniRef50_D1BPN9 Recombination helicase AddA n=3 Tax=Veillonella RepID=D1BPN9_VEIPT Length = 1288 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 55/550 (10%), Positives = 131/550 (23%), Gaps = 122/550 (22%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGR 308 D + +L + ++ + + D VG+ A + Sbjct: 393 DDPQPSEVAKELQDTFKEIMVDEYQDTNGVQETIINLISRVDNRFYVGDVKQAIYSFRMA 452 Query: 309 DYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA---------------VAGV 353 D + + DA ++IL N A Sbjct: 453 DSSLFMEKYNTYGGTDAVERRIDLAKNFRSDANILAATNFLFYQIMTEDAAELNYTEAES 512 Query: 354 NIEEFSRSDNKRPLDPLDSSITFHVC------------------HSPQREVEVLHDRLLA 395 I D D + + +RE++ + ++ Sbjct: 513 LIPGRIVEDVPEDWVGGDVELQLLDVSKDTLGASESDEDEGDDPENNERELDFIIQKIKE 572 Query: 396 MLEEDPTLT----------PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRAR 445 + + RD ++ + + A +P +++R Sbjct: 573 IHAAKKQVQNPDGTFRQIEWRDFAILRRSLAGWGTRAV----EAMRQAGIPAVVNERDGY 628 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 ++ ++LLS+ D+ + A+L ++ G Sbjct: 629 FEAQEIQLLLALLSIIDNPEQDLPMAAVLHSGLV-------------------------G 663 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 +D + + L L G W + Y E + L Sbjct: 664 LDANELGALRLSGEG---------------------SLWSLMPAYAEVAQDE-----RLL 697 Query: 566 SLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLG 625 + + + WR + + + ++ Sbjct: 698 AFIGHMERWRTLSRRHGVTDLLWDIYESQDYVNYVGAMPNGLVRRANVLALYDRAKGYEA 757 Query: 626 AQYGDAVPLSLLRDELAQRLDQERIS--QRFLAGPVNICTLMPMRSIPFKVVCLLGMN-- 681 + + + L ++ V + T+ + + F VV L G+ Sbjct: 758 SGFRGLFRFLRFVESLRDSNQDMPLANVVSEADNVVRLMTIHKSKGLEFPVVFLSGVQKR 817 Query: 682 --------------------DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 G +P + + + +++ + AL Sbjct: 818 FNMMDLRSELLIDKNAGLGLKGYFPDIRVSFPTMPWFYVKDVKEAALKAEEQRILYVALT 877 Query: 722 SAQQKLYISY 731 A+ KL+++ Sbjct: 878 RARDKLFMTG 887 >UniRef50_B5GJN9 ATP-dependent DNA helicase n=2 Tax=Streptomyces RepID=B5GJN9_9ACTO Length = 1129 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 50/503 (9%), Positives = 112/503 (22%), Gaps = 51/503 (10%) Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 +LL A+ + Y +++ + L+ +LL + L + W Sbjct: 561 VLLARALAEPERLIAHDAAYAKTARALGLLLARTRALLARGGTAEEALWELWNGTRWPAR 620 Query: 591 CRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 + + + + A+ + D Sbjct: 621 LERASRRGGAGGRNADRDLDAVCALFATAARAEERTGGRGALNFLAETEAQEIAADTLSG 680 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD------LMSQKPKRG 704 V + T + + +++V + G+ +GV+P Sbjct: 681 RTVRP-DAVRLMTAHRAKGLQWRLVVVAGVQEGVWPDLRQRGSLLEADRIGSDGLAEPLT 739 Query: 705 DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL---IDYIGQSHYL 761 + ++R LF A A +L ++ + +D PS + EL ++ Sbjct: 740 RGALLAEERRLFYVAATRAADRLVVTAVKAPAEDGD--QPSRFLTELGVEPQHLTVRPRR 797 Query: 762 PGDEALNCDE------SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 P E A R+ R Sbjct: 798 PLAVPALVAELRATTVDPRASPALREAAARRLARLAALTDGEGRPLVPSAHPGTWWGLAD 857 Query: 816 AHSEFVQPLPFTLPETVPLETLQRFWA-HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 V P + L + ++ F ++ Sbjct: 858 ETVNEVPVRDPDQPLALSASALGQLVDVCALQWFLGREVRAEAPAS------------TA 905 Query: 875 LSRYQINQQLLNALVEQDDAERL------FRRFRAAGDLPYGAFGEIFWETQCQEMQQLA 928 + L + + L E +++ Sbjct: 906 QGFGNVVHVLADEVATGRSPADLDVLMERLDTVWDGLAFDAPWKSAQERENARAALERFL 965 Query: 929 DRVIACRQPGQSMEIDLACN--------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQ- 979 + R + + + ++I G + +V D R + Sbjct: 966 RWHVLDRAGRTPVASEHPFDVTLPAGEHEIRIRGTMDRVDADAAGRAYVVDFKTGKNAPT 1025 Query: 980 -----LWLEHLVYCASGGNGESR 997 + VY + G Sbjct: 1026 AAEVAHHPQLAVYQRAVAEGAVG 1048 Score = 83.9 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 41/333 (12%), Positives = 87/333 (26%), Gaps = 32/333 (9%) Query: 151 TGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQR---------FIETLESAT 201 G V L + A + L+E L R + F + + + Sbjct: 89 EGSPVRLLSGPEQDLAV--RELLEGETALSAEGRGRVRWPGQLRACLTTRGFADEVRAVL 146 Query: 202 TCPPGL---PSRVFICGISALPPVYLQALQALGKHIEIHLL---FTNPCRYYWGDIKDPA 255 L P + P + A L +++++ L + D+ Sbjct: 147 ARSRELGLGPDALHRFARRTGRPDWQAAAAFLAEYLDVLDLQGVIDYAELVHRADLLARR 206 Query: 256 --YLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN-SDGEQDVGNPLLASWGKLGRDYIY 312 +L ++ + L G+P + + G D Sbjct: 207 PDVARELAASYDAVYVDEYQDTDPAQVRLLDALAGQGRTLLAFGDPDQSIYAFRGADVNG 266 Query: 313 LLSDLESSQELDAFVDVTP-----DNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPL 367 +L ++ + + + L R R+ ++ Sbjct: 267 ILGFPDTFRTREGAPAPVRVLPAARRAARAVLDATRALTLRIPLTRLPAAAVRAHREQLP 326 Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 + H C SP E + + D L ED L D+ V++ + Sbjct: 327 TREGGDVAVHTCPSPGAETDHVADLLRRAHLED-GLPWGDMAVLLR-----AGHRLPALR 380 Query: 428 SAPADRYLPYAISDRR-ARQSHPVLEAFISLLS 459 + +P + P ++ ++ L Sbjct: 381 RSLTAAGVPIDTEGDELPLRLEPAVQPLLTALR 413 >UniRef50_UPI0001C37CA2 recombination helicase AddA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37CA2 Length = 1213 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 91/886 (10%), Positives = 201/886 (22%), Gaps = 185/886 (20%) Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS------------DGEQDVG 296 G+I K ++ + + L + D VG Sbjct: 376 GNIIQSEAALKTSEYYDIIMIDEYQDSNNKQDLIFKLLSKNYRTDENGQPLYGDNVFLVG 435 Query: 297 NPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI- 355 + + + + + L+S++ D ++L + + EN + Sbjct: 436 DVKQSIYRFRLANPRNFIGTLKSAEPYSVESDAPIKSIL--LNRNFRSSENVIDFVNYVF 493 Query: 356 ----------------EEFSRSDNKRPLDPLDSSITFHVC-----------HSPQREVEV 388 E+ + S T + +E Sbjct: 494 SEVMSEKCGDIDYSDDEKLYFGAEYYRGISDEKSRTVINFINDDADEEEEDGNINKEAVF 553 Query: 389 LHDRLLAMLEED----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYA 438 + ML + P D ++V + + + +P Sbjct: 554 TAQTIAEMLHKGTEVVGNDGSTRPCRPSDFCILVRNN-----VHINKYAEQLSLLGVPAK 608 Query: 439 ISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVN 498 S+ + I LL + + + + A++ P+ + + L Y+R Sbjct: 609 GSEESGYLRSREIAVLIDLLRVVSNPLLDIPMAAVMTSPM----YMFSIRELAYIRSLEK 664 Query: 499 ESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIA 558 L +L G A + + L Sbjct: 665 GRP--------------------------LYSVLRGLADGEYEECFDMFLR--------- 689 Query: 559 ELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF--FLPDAETEAAMTLIEQQW 616 L L+ +R + + E + D + ++ E + Sbjct: 690 ---ERCRDFLDSLDSFRMD-SVTMTIGELISSIYDTTDFISVMQLYSDGEKKRANLRALI 745 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR----FLAGPVNICTLMPMRSIPF 672 Q + A + + L L + ++ +Q V++ TL + + F Sbjct: 746 QYAQSYEESAAFEGSGGLGGFLRHLDKVMENGDYAQGKVAASSGDYVSVLTLHRSKGLEF 805 Query: 673 KVVC--------------LLGMNDGV------YPRQLAPLGFDLMSQKPKRGDRSRRDDD 712 V ++ +DG P+ S +R R ++ Sbjct: 806 PFVFIAETSTKFQYDSDIVMCSSDGRAGYILYDPKIYRKYRTFQQSILASEEERDTRSEE 865 Query: 713 RYLFLEALISAQQKLY--ISYIGRSIQDNSERFPS----------------VLVQELIDY 754 L L A+QKL+ + ++++ + S + Sbjct: 866 MRLLYVGLTRAKQKLFVDLKCGEKAMKRVRSKLESCIINDGDISEIVAEADYFSDWIWAA 925 Query: 755 IGQSHYLPGDEALNCDESEARVKAHLTCLHT------RMPFDPQNYQPGERQSYAREWLP 808 + + C P E Sbjct: 926 LMHHSDFSAIAEKLGLTEAGESVPDVRCEEKLFDCVFAENISPVYIDRDEAAEKTTADEA 985 Query: 809 AASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTE 868 ++ + S+ P + + + + F +L+ T Sbjct: 986 VYTELEELVSDSYDRTLSETPAKLSVTEITKKLKQESDNF-DYKLK-------RPRFITG 1037 Query: 869 PFILEGLSRYQINQQLLNALV---EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 L G R Q D G + I E Sbjct: 1038 SGKLTGSERGTAIHTFFQYCDFDNAQADVSAEIEAVAKRGFITSAQADVISPEKASAFFA 1097 Query: 926 Q-LADRVI-ACRQPGQSMEIDLACNGV---------------QITGWLPQVQPDGLLRWR 968 L R+ A + + + +A + I G + V + Sbjct: 1098 SGLYKRIRAAGDKVWREKKFMVAVADLDIGSDALDQLKKSDGMIKGIMDLVFEEDDGLI- 1156 Query: 969 PSLLSVAQ------GMQLWLEHLVYCASGGNGESRLFLRKDGEWRF 1008 + + + L + ++ + F Sbjct: 1157 IVDYKSDRGASAKALSERYSMQLTLYKAAAELTMHKKVKAAYLYSF 1202 >UniRef50_A2RH76 ATP-dependent helicase/deoxyribonuclease subunit B n=5 Tax=Lactococcus lactis RepID=ADDB_LACLM Length = 1099 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 113/1063 (10%), Positives = 261/1063 (24%), Gaps = 184/1063 (17%) Query: 31 EPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQS 90 +V S+ + + L + + D + + K+ + Sbjct: 28 RKVYYIVPSSMSFEKEKEILERLAKGS---DTAVFDLLVTRF---------KQLPYYFDK 75 Query: 91 MSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVY-RPDWLAQW 149 M +L L R L S + + F + L+ R + L Sbjct: 76 REKATMKT--ELGTVGLSMLFRRVLRSFKKDEIPLYFSLQDSAGFLEMLIQLRAELLTAN 133 Query: 150 ETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPS 209 + + + Q + L F L Sbjct: 134 LSVENLPDNPKNQELKKILA-KFEAELSVEYANYSEFG----DFTNRLVDGEFDQQLKDV 188 Query: 210 RVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSF 269 + I G + Sbjct: 189 TIIIDGYTRFSAEE--------------------------------------ELFIESIQ 210 Query: 270 EDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDV 329 E + + L VG + + L + SS + + Sbjct: 211 EKVARFVVGTYSDENSLTAGSETIYVGTS-QMITRFRNK-FPVELRKIASSAVNEVY--- 265 Query: 330 TPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVL 389 + L IL+L++R V E D K + + E+E + Sbjct: 266 ---SKLTR----ILDLDSRFVITDEKIELKAEDEKYF--------RIWEAENQKVEIERV 310 Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHP 449 + + + +D V+V D +Y ++ VF +P+ + + HP Sbjct: 311 AKEIRQKIIQ--GAFFKDFTVLVGDPAAYEITLKEVFDLY----EIPFFYAQEESMSQHP 364 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 ++ F SL ++ + + ++DV+ LL + ++ EE + Y +V + I Sbjct: 365 LVIFFESLFAIKKNNYRTDDVVNLLKSK-VYTDANLDEEVIDYFEYYVQKYKISGRKKFT 423 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 E Q + LLG + Sbjct: 424 --EEFIESEFSQIELVNEMREKLLGSESPLQVFL-------------GNNRKKTGKKWVS 468 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 L + + + + + Q + + E L Sbjct: 469 DLQGLLENGNVMTNMNAYFSAAE------LQNEHQMADKHEQVWQMLISTLNEFLAVFSD 522 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + + D L L + Q VN+ + K + +G++ +PR Sbjct: 523 EKLKSVEFLDILLAGLKNAKYRQIPANVDVVNVKDYELVEPKTNKYIYAIGLSQTNFPRI 582 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEA------------LISAQQKLYISYIGRSI 736 ++ + + + A + SA++ L +S Sbjct: 583 KKNSTLLSDEERLEINQTTDENQFIEQLNVANYQKNQFTVLSLINSAKESLVLSMPQIMA 642 Query: 737 QDNSERFP--SVLVQE-------------LIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 + E P + +++ L + + A+ V++ T Sbjct: 643 NEQGEFSPVFQLFLKDADEKILQKIQGVNLFESLEHIGNSRSVIAMIGQIERELVESEET 702 Query: 782 CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP--LETLQR 839 R+ + + + ++ L ++ + L + + + + +R Sbjct: 703 SEDKRVFWSSIFRILVKSNADFQKILLDLAKDIDTVNLAPDTLEQIYGDKIYASVSSFER 762 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDA----- 894 F+ + F + L + E + ++ ++++ D Sbjct: 763 FYNCEYQYFLENTLSL---------ETFENIDINSKIVGNFFHEVFEKVMKETDLSAENF 813 Query: 895 ---------ERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR----------VIACR 935 E R F E ++ + + Sbjct: 814 DEKLTLVLQEVDKNYSRYFTQDATARFTWSNLEEIVRQTATVLKATVSTDELKTLLTESS 873 Query: 936 QPGQSMEI-DLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNG 994 E+ + + + + + G + ++ + + Y Sbjct: 874 FGLPKSELGNFSVDDIYLRGRIDRLDQLSTDYLGAIDYKSS--AHSFKLQEAYDGLSLQF 931 Query: 995 ESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLV 1037 + L + K QA Y + + P+ + Sbjct: 932 MTYLDVIK------------QAFPNQKIWGALYLQFKNQPINL 962 >UniRef50_Q04AN7 ATP-dependent helicase/nuclease subunit A n=3 Tax=Lactobacillus RepID=ADDA_LACDB Length = 1227 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 85/887 (9%), Positives = 204/887 (22%), Gaps = 176/887 (19%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL--FNSDGEQDVGNPLLASWGKLGRDY 310 A +R + ++ + +L + VG+ + +G + Sbjct: 388 SDLARAYYQSRFKEIMVDEYQDTNALQDGLIQRLKKAGKNNLFMVGDVKQSIYGFRQAEP 447 Query: 311 IYLLSDLES--------SQELDAFVDVTPDNLLHNIQSDILEL----ENRAVAGVNIEEF 358 ++ + Q + + + + I + + + + Sbjct: 448 SLFIAKYDEYGQENSAGKQRIIFAENFRSSQPVTQAVNLIFDSLLTKDFGGIDYQKEGQL 507 Query: 359 SRSDNKRPLDPLDSSITFH-----VCHSPQREV-----EVLHDRLLAMLEED-------- 400 + P L + E+ ++ R+ ++ + Sbjct: 508 KFAAGYDPEAALPTETEVLYQEDSSATDDDGELNQGDLAMVISRIQKLIADQTPIFDPKT 567 Query: 401 ---PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISL 457 ++ DI ++ S +P + D + L +S Sbjct: 568 GQTRPVSYGDIAILTRSKTSNLDI-----KQEFDRYGVPLFVMDVQNYFQTFELTVIMSY 622 Query: 458 LSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELP 517 L + D+ ++A+L P+ F+ + L + Sbjct: 623 LKIIDNPDQDIPLVAVLRSPI----FNFSSSDLAEI------------------------ 654 Query: 518 ATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRG 577 + + + ++ Y + +A L QL R Sbjct: 655 -----------------RLVNKSVSFYAALRTYAKKDTDLAA---RCRDFLAQLQDLRDF 694 Query: 578 LAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL 637 R E + + L + + + D Sbjct: 695 SLSHRISELLWTIYERTSFLEIVTAMTNGQQRRLNLTALYERASAYESSGFKDLYQFINF 754 Query: 638 RDELAQRLDQERIS--QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 + + V + T+ + + F VV +LG+ +Q + Sbjct: 755 IARMRKNQKDLAQPILSENAGNSVKLMTIHASKGLEFPVVFVLGLEHRYNYQQDITGSYV 814 Query: 696 LMS------------------------QKPKRGDRSRRDDDRYLFLEALISAQQKLYISY 731 L + + +++ L AL A+QKL ++ Sbjct: 815 LDASGLGLSFAYPFDEAEYRADTLANAWLKIAKKKKLLEEEARLLYVALTRAKQKLILAA 874 Query: 732 ----------IGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 G + E L + + + + + ++ Sbjct: 875 NIKLPARTDLAGLEEKWAKEISAGRLTLLDKMKVAKPLDFLAPALARAKQVKRLGEKAVS 934 Query: 782 CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVP-------- 833 L T ++ A+ A A A + F E + Sbjct: 935 DLATGQEGSLVFVHFDPKKDQAQLPDSEAVAASGADLTEDEAAVFKQAEKLYTFSQGGYP 994 Query: 834 ------------LETLQRFWAHPVRAFF--QMRLQVNFRTEDSEIPDTEPFIL-----EG 874 + +++ + P+ ++ + DTEP L Sbjct: 995 YLDASRTTAYQAVSEIKKVFGDPIEDELADSHISELQSANRYLQPIDTEPDFLFQNTVSS 1054 Query: 875 LSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIAC 934 + +L + A G + Q + + DR Sbjct: 1055 AELGTASHLVLQYYDYAKGDKDAIDSCIA---------GLVEKGRLSQTLASMLDREALS 1105 Query: 935 RQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSV--AQGMQLWLEHLVYCASGG 992 D ++ + LV+ G Sbjct: 1106 WFVKSDFAKDFYQQPDRLH--------REENFATILSPKTLFKDFSDFPGKILVHGTIDG 1157 Query: 993 --NGESRLFLRKDGEWRFPPLAAEQALHYLSQL----IEGYREGMSA 1033 E+ + L P ++A+ L + + Y ++ Sbjct: 1158 YYEAENGIILFDYKTDHVNPRKQDEAIQKLKEKYQGQLRLYERALNE 1204 >UniRef50_B7IZB5 Helicase, UvrD/Rep family n=5 Tax=Bacillus cereus group RepID=B7IZB5_BACC2 Length = 666 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 47/532 (8%), Positives = 144/532 (27%), Gaps = 72/532 (13%) Query: 198 ESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYL 257 ++ P LP++ I + + + Y + Sbjct: 198 KNHMIKPSDLPTKSVIDRELR---DIYAMYEQWKEQQNMIDFDDILVIMYDLLTTNFKLR 254 Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSD 316 + + + ++ + + VG+ + + G + +L+ Sbjct: 255 ELIQEKIKYILVDEFQDSSSIQYAILQIIAAPHNNLTIVGDDWQSIYAFRGANPGIILN- 313 Query: 317 LESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRS---DNKRPLDPLDSS 373 F + + ++ G +I + ++ S Sbjct: 314 ---------FPNDYSKVKKVILDTNYRSNPYIVGLGNSIIKQNKKQFDKTLNTNKDSGSK 364 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + ++E ++ + ++ ++ RD ++ I + Sbjct: 365 PKYFSPDDSKQEATMIINDIIGQIKGGNK-NYRDFSILYRTHAVSRSLI-----EQLVIK 418 Query: 434 YLPYAISDRRA-RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRY 492 +P+ + ++ ++ I++L L + L + P+L D Sbjct: 419 EIPFVQYKTKDLFYNNSNVKPIINVLKLAIRPKTDFESLKGVC-PMLYIGKD-------- 469 Query: 493 LRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDE 552 + ++ YA++ +G+ + ++ Y Sbjct: 470 ---------------------------------KVIDSIINAYALDDLEGQTKPLISYLL 496 Query: 553 SSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLI 612 L + L + R A E + ++ Sbjct: 497 KCQLTHNQNKRVMQLYKTIKECRGMSAIEAIQCIRYGHLQYEQYLLDNKRKNMTTHKEMM 556 Query: 613 EQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQER-ISQRFLAGPVNICTLMPMRSIP 671 ++ + E + L ++L + ++ + + + +++ T+ + + Sbjct: 557 LEELDEL--ETSAKGFSTIKELIDFIEKLETQYEKMKELQKEQNVNAISLMTIHGSKGLE 614 Query: 672 FKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYL---FLEAL 720 FK V ++G ++G P + + D + + + F +L Sbjct: 615 FKHVYIIGASEGTLPHKSSLEITDDRVIDGSKEKKKYFKNYLRKKEGFYTSL 666 >UniRef50_Q4L4Y3 ATP-dependent helicase/nuclease subunit A n=65 Tax=cellular organisms RepID=ADDA_STAHJ Length = 1225 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 69/835 (8%), Positives = 191/835 (22%), Gaps = 178/835 (21%) Query: 259 KLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG----EQDVGNPLLASWGKLGRDYIYLL 314 + ++ ++ + ++ D VG+ + + D + Sbjct: 393 EYRSQFEEILVDEYQDTNQVQEAIISKIKRGDESNGNLFMVGDVKQSIYKFRQADPTLFM 452 Query: 315 SDLESSQELDAFVDV-TPDNLLHNIQSDILELENRAVAGVNI---------------EEF 358 F L ++ + + + + Sbjct: 453 DKY------HRFTKDGDQSGLRIDLSKNFRSRKEVLATTNYLFDHMMDEEVGEIEYDADA 506 Query: 359 SRSDNKRPLDPLDSSITFHV----------CHSPQREVEVLHDRLLAML----------E 398 + H ++E + +++ ++ E Sbjct: 507 RLYFGATKYSDKSMPLELHALIQDKSSDNDLEKSEQEARYIAEQVKYIIEHKQVYDMKSE 566 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 T +DI+++ + + D +P+ ++ + + +S L Sbjct: 567 TYRQATFKDIVILERGLKNARN-----LQQVFKDYNIPFHVNSKEGYFEQTEVRLVLSFL 621 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 D+ ++ L+ + TE+ L +R Sbjct: 622 RTVDNPLQDIYLVGLMRS----VIYQFTEDELANIRVQSM-------------------- 657 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + +QS+L Y + LV L + +N++ + Sbjct: 658 --------------------NDDYFYQSILHYMKDQEANPLLVEKLEHFMDDINMY-QEY 696 Query: 579 AQERPLEEWLPVCR--DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSL 636 +Q P+ + + + +F + + + + + + Sbjct: 697 SQSHPVYQLIDKFYNDHYVIQYFSGLIGGKGRRANLYGLFNKAVE-FENSSFRGLYQFIR 755 Query: 637 LRDELAQRLDQ--ERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN------------- 681 DEL +R E V + T+ + + F V ++ Sbjct: 756 FIDELIERNKDFGEENVIGPNDNVVRMMTVHSSKGLEFPYVIYSELSKNFNKGDLRKPLI 815 Query: 682 ---------DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYI 732 D Q ++ ++ L AL A+++L + Sbjct: 816 LNQKYGLGIDYFDLEQNVTYPSLSSVVIKSITEKELISEEMRLMYVALTRAKEQLILIGT 875 Query: 733 GRSIQDNSER-------------------FPSVLVQELIDYIGQSHYLPGDEALNCDESE 773 + + P L+ ++ + LP ++ Sbjct: 876 IDKEEALEKLERLPISGNQIALHKRLSADRPFDLIYSILAKYQSTSLLPEYRFEKSIDNL 935 Query: 774 ARVKAHLTC------LHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHS----EFVQP 823 + + E + + + ++ Sbjct: 936 DESLRPTVDIKIAQFEELSIEDSESEQESRNISDLEVEGSHDDTLKQQINDQLSFKYPYL 995 Query: 824 LPFTLPETVPLETLQRFWA-----HPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRY 878 P + L+R Q R+ V+ + E + Sbjct: 996 KDTEKPSKQSVSELKRQLETEESGTSYERVRQYRIGVSTYERPKFL--RENKKRKANEIG 1053 Query: 879 QINQQLLNALV------EQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ-QLADRV 931 + ++ L + + + A +I +E ++ L + Sbjct: 1054 TLMHTVMQHLPFKETRMTETELNDYINELIEKHIIEEDAKKDIQFEAVMNFIRSDLYMTI 1113 Query: 932 IACRQPGQSMEIDLACNGV-----------QITGWLPQVQPDGLLRWRPSLLSVA 975 + + + + V I G + + + Sbjct: 1114 TQADKVYRELPFVVNQARVDEMPESDEDVSIIQGMIDLIFLKDDQYYFV-DYKTD 1167 >UniRef50_C7RA34 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RA34_KANKD Length = 913 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 103/885 (11%), Positives = 232/885 (26%), Gaps = 151/885 (17%) Query: 191 QRFIETLESATTCPPGLPSRVFICGIS-----ALPPVYLQALQALGKHIE----IHLLFT 241 QR L + + A L+ K HLL Sbjct: 22 QRLARHLREEYNRWQAAQGKTVWATLQVMPWGAFTATLWDLLREQLKSSSSEKLPHLLSD 81 Query: 242 NPCRYYWGDIKDPAYLAKLLTRQRRH----------SFEDRELPLFRDSENAGQLFNSDG 291 ++ W DI + + L + + + + D Sbjct: 82 QQSQFIWQDIIERSDWNDFLLNINATSSKAWQAWQQYQQWQLDITQSLTWDKDTQAFKDW 141 Query: 292 EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVA 351 + L S I LL +L S +L + I +L +R Sbjct: 142 ASEFVQRLEESHWIDSASSINLLLELMSQHQLPVADTIFTAGF-EQITPQQQKLFDRLRQ 200 Query: 352 GVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQRE----VEVLHDRLLAMLEEDPTLTPRD 407 +EE + S+ +S + E + D ++ L+++P R Sbjct: 201 TSKLEELASSNTTVTP-------QVLSFNSMREEFKTAIHQARDSVIKALKDNPDQPFR- 252 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADR---------YLPYAISDRRARQSHPVLEAFISLL 458 ++V +++ + I+ + + Y IS + P++ ++LL Sbjct: 253 CAIVVPELEKHKALIERLLWQELTPSLEPEQQPVVGI-YDISLGESLNRQPLVVTALNLL 311 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 + ++ + LL P + L Sbjct: 312 KFLNGSIEAQVLQQLLLSPYFGKPKASGTGHDQLLS------------------------ 347 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 R L + + + ++ + + A L+ L+ ++ + Sbjct: 348 ----------DRARLEKFLRKSHKQRFAISELSDLAQQAKITSSSFADLIESLSSAQQLV 397 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTL-IEQQWQAIIAEGLGAQ--YGDAVPLS 635 + L +W+ +L+A P T + ++Q + Q Y + + S Sbjct: 398 KTKLTLADWVKRLTSILDAAEWPGMRTLQSREYQVQQTLYDCFNQLRQFQVFYPEVISFS 457 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFD 695 L + L+Q + +++ Q P+ + L+ + F + L G V P Q P F Sbjct: 458 SLLELLSQLIAEKQFHQELPKAPIQVMGLLETLGLEFDQLWLTGATYQVLPAQPNPNPFI 517 Query: 696 LMSQKPKRGDR----SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQEL 751 + R + +L+++ + +SY SE PS + E Sbjct: 518 DKQTLKQHQMPGSSAQREYEYAQQLFNSLLASGDDVTVSYPRFDGS--SELLPSPFIAEF 575 Query: 752 IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAAS 811 + T + + + Sbjct: 576 PE------------------------------QTIAANARLAPDFINQIVESSRREDSVE 605 Query: 812 QAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFI 871 H + + + + P +A+ RL+V E + Sbjct: 606 SYQDTHGQPLATGVVKGGTGFFRDQIN----CPFKAYMSYRLKVKEFEEVEQ-------G 654 Query: 872 LEGLSRYQINQQLLNALVEQDDAERLF---------------------RRFRAAGDLPYG 910 L + R + +L A ++ D+ + L Sbjct: 655 LNAMERGSLVHTVLEAFWKEHDSNEILTDKSESQLSSLIEPYLASVLDEYSEQFYYLQLA 714 Query: 911 AFGEIFWETQCQEMQQLADRVIACRQ---PGQSMEIDLACNGVQITGWLPQVQPDGLLRW 967 F + ++ +++ + + + G+ + ++ Sbjct: 715 DFADNEFQRLLKQLVEALQVDAKRLPFTSLPPEQDQSITIEGLTFNLKVDRIDEVEDGLL 774 Query: 968 RPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLA 1012 + L + + L+ G+ ++ Sbjct: 775 -IIDYKTGTPTRAKLYPKNKELAPEEPQLALYAINQGDKPIAGVS 818 >UniRef50_B0MLR5 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLR5_9FIRM Length = 767 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 57/555 (10%), Positives = 135/555 (24%), Gaps = 104/555 (18%) Query: 225 QALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAG 284 + ++AL L R Y + + + + + Sbjct: 164 EEIEALSGSGYDTLRI---YREYNLALSSRSLMDYDDQMVTALDILRKYPDILAYFNGRF 220 Query: 285 QLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLH-------- 336 + D QD L + + Q + AF P+ L+ Sbjct: 221 RYICVDEAQDTSKIQHEIIRLLAAKSGNIFMVGDEDQSIYAFRGAYPEALIDFEKTYKNA 280 Query: 337 ---NIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLH 390 ++ + + F R R ++ + C + + L Sbjct: 281 QILFMEQNFRSTPEIIGVADSFVKCNRFRREKTIRAVNKSGIPVRIVRCERRNVQYDFLC 340 Query: 391 DRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA-RQSHP 449 + A E+ + + DS V +PY + + Sbjct: 341 G-IAARNEQ-------QTAALFRNNDS-----AVVLVDMLERNNIPYRLKGGEKTFFTSR 387 Query: 450 VLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDD 509 + ++ ++ + + +A+ IT++ + + I Sbjct: 388 PVLDITEIIRFINNPYDIDSFMAI----YYKIGLYITKQTAEAACKISLQRHIT------ 437 Query: 510 NVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLM 569 + ++ + + Sbjct: 438 -------------------------------------ITDALLGIDTGTQISVNSKRNIK 460 Query: 570 QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYG 629 Q R E + M A + + I + Sbjct: 461 QTAQLMRQAQNSSATEVLSIILHGMQYADYAHKNGLDENKYDILRMLAR----------- 509 Query: 630 DAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 + + L D L++ + + T+ + + + V LL + D V P Sbjct: 510 NVNSSAELIDRLSELSGIMAEHKDDPYSKFTLSTVHSSKGLEYDCVYLLDVIDNVLPCIT 569 Query: 690 APLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQ 749 D + D + +++R +F A+ A+++LY+ S + Sbjct: 570 KDKLND-------KEDIKQYEEERRVFYVAVTRARKELYLFSCKGES--------SEFLD 614 Query: 750 ELIDYIGQSHYLPGD 764 E+ + + D Sbjct: 615 EIDKNLPIEYTDSND 629 >UniRef50_Q1GX41 UvrD/REP helicase n=1 Tax=Sphingopyxis alaskensis RepID=Q1GX41_SPHAL Length = 1112 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 61/570 (10%), Positives = 133/570 (23%), Gaps = 70/570 (12%) Query: 256 YLAKLLTRQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIYLL 314 A++ R ++ + + +L+ VG+ + + G + Sbjct: 407 VRAQVAQRHSMVLVDEYQDVNRASARLLMELYREGARLWVVGDARQSLYRWRGASSANM- 465 Query: 315 SDLESSQELDAFVDVTPDNLLHNIQSDILELENRA------VAGVNIEEFSRSDNKRPLD 368 F + + E+ + + + N + Sbjct: 466 ---------AQFERDFSGGKRLPLDRNYRSTEHIVGLGRGFARDMRAGKNGLAYNAKSAR 516 Query: 369 PLDSS-ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 S V + E E+L + ++ + + V+ + + Sbjct: 517 EEPGSATRLLVGLDDRCEGELLAAEITSLKQA--GVPLSQQAVLAPTNNRLD-----IVA 569 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 A+ + + + +S+++L Sbjct: 570 GILAEHGIATTHLG--SFFEREEVRDLLSVIALLAEANGG-------------------- 607 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 +R D + A L G + + Q Sbjct: 608 ---ALVRVAALREIGVGASDIGVIVRAAQAARVPLLSLLATASTLTGMSPTGGEALEQLG 664 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 L + LL + + R L F Sbjct: 665 LQMAGLDQFTPAFEVAASWLLDRSDYLRDLAVAPDASGSLSRAALLALLGFLDQRELGGQ 724 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 +T S + LA D + A V + T+ Sbjct: 725 PLTPARAL---------------KRMRSTVL--LADDRDLRDATLGADADAVRLMTIHGA 767 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRS-RRDDDRYLFLEALISAQQK 726 + + F V ++G++D P L + R +++ LF A+ A+ Sbjct: 768 KGLEFPAVHVVGLHDQCLPGAFRRDDSPLPPGLVEPETREGHLEEEECLFFVAISRAEDH 827 Query: 727 LYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTR 786 L + + + R PS + L + A + + L Sbjct: 828 LRLYHSELANVRG--RKPSPFLGRLGALERRHLPAAATAAGAAGSPLSPISTDRINLFDV 885 Query: 787 MPFDPQNYQPGERQSYAREWLPAASQAGKA 816 FD + R+ + E + K Sbjct: 886 RDFDSCPLRIAYRRFFGVEGRRHETPYLKT 915 >UniRef50_C2KR62 UvrD/REP helicase n=2 Tax=Mobiluncus mulieris RepID=C2KR62_9ACTO Length = 1213 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 85/868 (9%), Positives = 207/868 (23%), Gaps = 208/868 (23%) Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLES 319 R + ++ + + LF + VG+P A + G Sbjct: 358 YQQRYQLVLLDEFQDTSVAQLKYLSALFRNHAVTAVGDPNQAIYAWRGAS---------- 407 Query: 320 SQELDAFVDVTPD--------NLLHNIQSD--ILELENRAVAGVNIEEFSRSDN------ 363 + ++ F D L + ++D IL + N + + + + N Sbjct: 408 AASIEEFPKYFSDNPSKVASLTLRTSWRNDAAILNVANCIASEIAEQNRTEGKNENFIMP 467 Query: 364 ----KRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEE-----------------DPT 402 + P + + E + + + L ++ Sbjct: 468 DLSLRPGASPDLGRVYGAPFLTDTDEAQAVANFLENWRKDLEQAVEKTAAWQAAGRVGQP 527 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 + V+ P + + R +P+ + R + P + + L++ Sbjct: 528 PSLPTAAVLCRKKSIMLPIL-----RELSRRGIPFQLQARESALLDPGVVLVRAALNVVV 582 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 + S +L LL+ RF ++ E L + Sbjct: 583 NPQNSGSLLLLLN------RFRLSREDLEAI----------------------------- 607 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 A +Q V+ + + LA L + + ++ Sbjct: 608 -----------SKAAGRTVLPFQEVMKSQIGASVSQPGRERLAILREIIAKLEKHVSYAT 656 Query: 583 PLEE--WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDE 640 PL+ + +P + I ++ + L + Sbjct: 657 PLQMAKLAAKLLGLDIEQRIPGTPYQEEAFTI------FLSIIEDFERSGQATLRAFLEW 710 Query: 641 LAQRLDQE----RISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAP----- 691 L +E + + V + T+ + + + V + G+++G +P Sbjct: 711 LDVAESEEKEVGQFQEAVDTKKVQVITVHAAKGLEWDYVAVPGLSEGNFPDNRTEIWLKN 770 Query: 692 ---LGFDLMSQK----------PKRGDRSR----------------RDDDRYLFLEALIS 722 L + L + + G++ R ++ L A Sbjct: 771 YFVLPYPLRGDRDSLPQYEINLRQLGEKDRSRKFLEQYDGVRTLHHLKEEANLAYVAFTR 830 Query: 723 AQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGD------------------ 764 A+ L++S + + P + L+ + + Sbjct: 831 AKSHLFLSMSWFKGCNVNTAKPGAFFRVLLGEDAKLFCMEKPNKGMTLVNSQEFMHLPDW 890 Query: 765 ---------EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGK 815 E + + +A L + + P++ +P + Sbjct: 891 LGDINPCFTEPEEANPNVQEFEAGLWQAPSWLDLPPESIRPETFPWDVAGLQRSYQMVTV 950 Query: 816 AHSEFVQPLPFTLPETVPLE-TLQRFWAHPV-----RAFFQMRLQVNFRTEDSEIPD--- 866 A L + + + P + + D D Sbjct: 951 AAENPPDSQALESAIPGSLSWRVWKLYNAPRPRLDSSTLLRQIAATSVVKLDESSDDFML 1010 Query: 867 -----TEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQC 921 I + + Q + +P G+ + +++ Sbjct: 1011 QKLRPLPLPPSPAARLGIIMHAWIAQQLGQPTLD-----------IPDGSEATLDADSRL 1059 Query: 922 QEMQQLADRVIACRQPGQSMEIDLACNGVQITG----------WLPQVQPDGL-LRWRPS 970 + + + +D+ +G + G + V + Sbjct: 1060 K-LDCYRQTWENLQFLKGKAVMDIEHSGSLVVGEGTEGFEVPLRIDAVFQERSCGTTWIV 1118 Query: 971 LLSVAQGMQLWLEHLVYCASGGNGESRL 998 A G L Sbjct: 1119 DWKTASHPHPPQYERYLHQLGIYRLYWL 1146 >UniRef50_D1C5W7 ATP-dependent nuclease subunit B-like protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5W7_SPHTD Length = 1066 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 90/792 (11%), Positives = 197/792 (24%), Gaps = 137/792 (17%) Query: 368 DPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFG 427 D ++ P REV + + ++ V+ + Y + VF Sbjct: 270 TEPDGTVRLVSAPDPAREVREAAR--ACLAWAAEGIPFHEMAVVFRRDEPYRALVDEVF- 326 Query: 428 SAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 + +P + R HP +LAL P+ A Sbjct: 327 ---RETGIPVYLYGGRPLAEHP-------------QGRRLLALLALAGSPLRRAAVMEFI 370 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 G D + G+ W L+ + E + Sbjct: 371 TETHLPDATAERYGPVEPALWDALSREAGIVEGRDQWISRLSLLHQAKRRAVLGEEQEDP 430 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 DE E + L+ + + + L RD+ + E Sbjct: 431 ERIDERLRTELEAIERLSQFIKDFADQLEARPEHASWQAHLDYLRDLAVTYVDRA-EPLL 489 Query: 608 AMTLIEQQWQAIIAE--GLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLM 665 + + A++ + + Q L D+ + F V + + Sbjct: 490 DLLAPLARLDALVPQVSFVRFQRTVRRVLERADAGTVLGPDEVPPNGHFGRDGVAVLDVF 549 Query: 666 PMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLF--------- 716 +R + + V +LG+ + +P L ++ + R + Sbjct: 550 SLRFLRLRAVAVLGLAERSFPAPPRQDALLLDRERVRLSAAGRWEIPLRAAGADPEPLLF 609 Query: 717 LEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI-GQSHYLPGDEALNCDESEAR 775 A+ +A ++L +SY RS D PS + + + G+ + ++L+ + Sbjct: 610 ALAVAAAGERLLLSYP-RSGGDGRTILPSHFFRAAAEALTGRRVGVEDIDSLSRELFTRV 668 Query: 776 VKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPET---- 831 Y +E ++ + Sbjct: 669 PTNRFGAATPEEALTAGEYDRTLLALLPQEGAECLARLHPPFARARAAWEARWRGRELTT 728 Query: 832 ----------------------VPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEP 869 + L+ + P R F L++ E + E Sbjct: 729 YDGVLGEAAAAAVARRAGLRRAISPSRLETYATCPFRFFLSYLLRLEPVEEPDLLERIES 788 Query: 870 FILEGLSRYQINQQLLNALVEQ--------------------DDAERLFRRFRAAGDLPY 909 L R + +L + + AE G + Y Sbjct: 789 -----LERGALVHDVLQRFLTECGANDPPSRVRREAHLARLRAIAEEECADREQRGLVGY 843 Query: 910 GAFGEIFWETQCQEM-----QQLADRVIACRQPGQSMEI-------------------DL 945 ++ +++ +++A+R A R + L Sbjct: 844 PLLWQVDRRAILEDLITWYDREVAERDDALRPGAFELRFGPKWTHDREDSPLSTDDPVPL 903 Query: 946 ACNGVQIT--GWLPQVQPDGLLR-WRPSLLSVAQGMQLW----------LEHLVYCASGG 992 +G+ + G + ++ +R + L+ +Y + Sbjct: 904 QADGLTLRFQGRIDRIDWSPDRSAFRVVDYKTGKCPGHHKDDRLAGGRALQLPIYLLAAS 963 Query: 993 NGE---------SRLFLRKDGEWRFPPLAAEQALHYLSQ-------LIEGYREGMSAPLL 1036 + ++ + GE++ + + L EG G P+ Sbjct: 964 HVLGIPWERGEAEYFYVTRRGEFKRVRFSGATLRDRWEEFTALVQGLAEGIAAGRFHPVP 1023 Query: 1037 VLPESGGAWLKT 1048 + Sbjct: 1024 GPSREHCTYCDY 1035 >UniRef50_C0EHH1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHH1_9CLOT Length = 1188 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 81/827 (9%), Positives = 170/827 (20%), Gaps = 159/827 (19%) Query: 263 RQRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQ 321 ++ + + + VG+ + + L Sbjct: 409 EIDEILVDEFQDVNQMQDMLFEAVSKDETNLFLVGDIKQSIYRFRQASPEIFLQKRARYA 468 Query: 322 ELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI-----------------EEFSRSDNK 364 + P L + + + E+ + + Sbjct: 469 DFS--TGSYPARLT--LAENFRSRPEVTGCVNYLFRQLMSEQLGELDYGEGEQLRAAASY 524 Query: 365 RPLDPLDSSITFH--VCHSPQR-----EVEVLHDRLLAMLEED----------PTLTPRD 407 P + + E + ++L+ML T D Sbjct: 525 PPHPDAQAELHLIDTAADDSDEGRVAIEANYIGRKILSMLRNGYPVTGEDGKLRPCTLSD 584 Query: 408 IIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVS 467 +++ + V+ L + + ++L Sbjct: 585 FAILLRSKKDKA----EVYAEQLMHLGLDVWTENTSGYFRSREVSLMLNL---------- 630 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 L ++D P+ Sbjct: 631 ---LRVIDNPL-----------------------------------------QDIPLLSV 646 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 L L G+ + + A GH + L+ R A + Sbjct: 647 LLSPLYGFTPDELAELRILDRRAPLYLCVTASDSGHCREFVQSLSRLREAAAVTSVEKLI 706 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 + + L E+ + + A D + Sbjct: 707 QKIYDETLFYALFGAMESSEQKLANLRLLLSYAAGYERGSGRGLSGFLRYIDTAEEANRD 766 Query: 648 ERISQRFLAG--PVNICTLMPMRSIPFKVVCLLGMNDGVY-------------------- 685 + F V I T+ + + F + + Sbjct: 767 FECANIFTENSSAVRIMTMHKSKGLEFPICFVANCAGRFNQRDLSSVYCLSNTHGFAMKL 826 Query: 686 --PRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD----- 738 P L R+ ++ + A+ A++KL ++ + Q Sbjct: 827 TVPELLKQYPTLPYLAAQLENKRALLSEEMRVLYVAMTRAREKLILTIAADNPQQLVQKA 886 Query: 739 -----NSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 ER P + Y D Sbjct: 887 AVQIVEGERLPFYPLYSAHSYADWLLMGLLRHPSAGDLRSQADSGLSPYEPQSGDARCPL 946 Query: 794 YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRL 853 + Q Y + L A A +A E + L L L P + Sbjct: 947 KVVLDGQEYGEQELEQAQPAPEADEETLAALRQNLGYRYAHAALSEI---PAKLSVTQIA 1003 Query: 854 QVNFRTEDSEIPDTE-PFILEGLSRYQINQQLLN---ALVEQDDAERLFRRFRAAGDLPY 909 + + + P E L R Q + DD E R R G + Sbjct: 1004 EHSRPASLTRRPQFERERGLTPAERGTATHQFIQFADFARAADDLEAEISRLRENGFIDP 1063 Query: 910 GAFGEIFWETQCQEMQ-QLADRVIACRQPGQSMEI-------------DLACNGVQITGW 955 + + LA R+ A R+ + ++ + + + G Sbjct: 1064 QQAASVDRKGLESLFHSPLAQRIRAARRVYRELDFFYDLDASEIFPEQETDGEKILVQGI 1123 Query: 956 LPQVQPDGLLRWRPSLLSVAQGMQLWL------EHLVYCASGGNGES 996 V D + + + + ++Y + Sbjct: 1124 ADCVL-DEGESLVIIDYKTDRATREQIAGRYRGQLMLYKRAVEAMLG 1169 >UniRef50_C6P6S9 Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6S9_9PROT Length = 825 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 102/806 (12%), Positives = 224/806 (27%), Gaps = 125/806 (15%) Query: 246 YYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGK 305 GD A + + R++S E L + +A Q LA + Sbjct: 75 DLPGDADAFAAAVQQAYQARKNSTLQLEARLVFELWHAMQSGEELDAGRAYQQRLAKLAE 134 Query: 306 LGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNK- 364 R +++L + F+D ++ +L ++ S + + Sbjct: 135 QARQPLFVLRTSDWCALEQRFLDEYAG----RAAVEVFDLRKMDAQWGSLLHESSAGLRS 190 Query: 365 RPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQA 424 + + L + F S ++E ++ L+ RDI ++ D + Sbjct: 191 QSIASLGGKLGFFAATSLEQEARAAAMQVRLWLQAGK----RDIAIVAQDR-----VVAR 241 Query: 425 VFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFD 484 + + A + V L+ S F D+L LL P + A Sbjct: 242 RMRALLERAEIMVADETGWTFATLSVSTVLDRWLTALQSDFYHHDLLDLLKSPFIFADMT 301 Query: 485 ITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW 544 A+ + + + L ++L + + ++ Sbjct: 302 ---------------------------------ASERKSAVYQLEQLLRKQGVVAGLEKF 328 Query: 545 QSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAF-FLPDA 603 +++ ++ + A+LL Q ++R L EWL R+ L Sbjct: 329 SALVEHETVLHQPLARLRQAAALLEQ--------HKKRTLAEWLAALRESLQVLSIDSGL 380 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICT 663 + A + + E + R LAQ+LD + + V Sbjct: 381 LQDDAGMQLLGALETWQQELTADEGR--YRFPEWRRWLAQQLDTQTYRDNSIDSQVRFTH 438 Query: 664 LMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRR--DDDRYLFLEALI 721 L R F V LLG + P + + + +R + + L +L+ Sbjct: 439 LAATRWRAFDAVLLLGCDADHLPSVADGGRWFNDAVRSSLNLPTRAINAERQRDDLLSLL 498 Query: 722 SAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLT 781 + + +++ + ++ S ++ L D + Sbjct: 499 ALNDCVLVTW--QKDRNGEAGLLSPYLEILRDLHLLTWGDD------------------- 537 Query: 782 CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFW 841 E +Y A + ++ +P V + Sbjct: 538 ------------LAESELPAYLAAEEARAVELPQSAQPAPVVQKEIIPTGVSISAYNSLV 585 Query: 842 AHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDD---AERLF 898 A P + + + L++N E E + + +L E+ Sbjct: 586 ACPYQFYARHILRLNELDEVQEGIEK-------RDYGERVHAILQRFHERYPRVSEHSRD 638 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEM--------------QQLADRVIACRQPGQSMEID 944 A + F ++ + Q+ + R D Sbjct: 639 TMEVALRQISEEVFADLLQQDFEARAWLARWFKALPAYIEWQMVNEAQGWRYVESESAFD 698 Query: 945 LACNGVQITGWLPQVQPDGLLRWRPSLLSV-------AQGMQLWLEHLVYCASGGNGESR 997 GV++ G + ++ +G + R + + + + C + + + Sbjct: 699 WELEGVRLRGRIDRLDMNGQQK-RVLDYKTQSDQVLRNKLREPGEDVQLACYAYAHEAAD 757 Query: 998 LFLRKDGEWRFPPLAAEQALHYLSQL 1023 + + E + L+QL Sbjct: 758 AAFLSIESGKVKSVEPEGDVPLLAQL 783 >UniRef50_D2QPX2 Putative uncharacterized protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QPX2_9SPHI Length = 1039 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 112/978 (11%), Positives = 257/978 (26%), Gaps = 139/978 (14%) Query: 64 LPASFIWDMFVRVLPEIPKESAFNKQSMS-WKLMTLLPQLLEREDFTLLRHYLTDDSDKR 122 +F P + + + L L +R + D + Sbjct: 3 FLQQTAQRIFDTHGPSLNDVWVILPTRRAVSTFLDELAALSDRPFLAPHALAVDDFITQA 62 Query: 123 KLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQP 182 QL + LF+ Y V+ + + + W + L L P Sbjct: 63 AGVQLIDSVSLLFELYDVF--------KEIDPLVEFEQFIGWASILLSDFDRIDQYLVNP 114 Query: 183 RWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTN 242 + L + LE P + + Y + + + H H L Sbjct: 115 HELFSYLTAA--KALERWQVDMPSSAKPIV---ETPGTTRYFKLFENI--HTAYHALH-- 165 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS 302 +L ++ + L + + VG L+ Sbjct: 166 ---------------QRLNEQRLAYRGMAYRLLAQQVEPLIRDNLAYERVYFVGFNALS- 209 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 K I +L D + ++ + ++ + ++ + Sbjct: 210 --KAEEHIIRVLVDAKKAELIWDADLYYMNDRRQEAGEFLRRYKDNGWLFSRQNHADLAQ 267 Query: 363 NKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD-------IIVMVADI 415 L + +I + + + ++ + + + PRD +++AD Sbjct: 268 LSNNLLGSEKNIRVVGVPNASMQ-TKVAGKIYSEWQRADSAVPRDAATPSPKTAIVLADE 326 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLP--DSRFVSEDVLAL 473 P + A + ++ + +S + +L + F ++D L Sbjct: 327 TLLVPVLY-----ALDENVTDLNVTMGLSLRSSLLFTLVDTLFEMQRTVHEFRTKDGRDL 381 Query: 474 LDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGL---TR 530 P R + +L+Q+ G+ W D + E+ P + R Sbjct: 382 KI-PKFHHRHVVKLLNHPFLKQYERIRGLMWPGDVLSTGEILPPEPLFQWIAKEIVKNQR 440 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE---- 586 + L G+ ++ E + + + + + R + E Sbjct: 441 VYLTERDMLELGQDDPLVRVLFRRWPNEEPMKAIRTFYDLIELLRDVYRTSQDAIEIEYL 500 Query: 587 -----WLPVCRDMLNAFFLPDAETEA-----AMTLIEQQWQAIIA------EGLGAQYGD 630 L L+ Q AI+ + Sbjct: 501 YLFFTLLKQLEATLDRQGEGAQGAGRGVPVPKARNRGQGGTAILDTGAPVPMLHVHEPSA 560 Query: 631 AVPLSLLRDELAQRLDQERIS-QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 AV + L+ L + + Q I + I ++ R++ F V +L +N+G+ P+ Sbjct: 561 AVTVRSLKQFLYELIRQTSIPFTSEGKSQLQIMGMLETRALDFDRVIILSVNEGILPQSR 620 Query: 690 APLGFDL-----MSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 + Y F L A + + + NS+ P Sbjct: 621 KLNSLIPFDIAADENIKLPTYSEQEAVMAYHFYRLLQRASEVVLLYTTSTDAYGNSKGEP 680 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 S +++L + + R S + Sbjct: 681 SRFIRQLEHELVPRSNGLVRISYPTVR-------------------------FGRTSEKK 715 Query: 805 EWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 E K S + + + + L +F + +R +F + ++ + E Sbjct: 716 ETSLTELSVPKTESVRDGLINLLITKGLYPSYLNQFVSCSMRFYFSRIVNISEEEDIEEK 775 Query: 865 PDTEPFILEGLSRYQINQQLLNAL-----VEQDDAERLFRRFRAAGDLPYGAFGEIFWET 919 + +++ L ++ + + + G + Sbjct: 776 -------MGAAEFGSWLHKVMERLDLEYRLKALPIDESIIKMLLEEEFASTNKGRVIESG 828 Query: 920 QCQEMQQLADRVIACRQPGQ-----------------SMEIDLACNG---VQITGWLPQV 959 + LA +++ Q Q + + + G V+I G + ++ Sbjct: 829 MNLLLYDLAQKLMLDFQRQQNALPGLTVIGTEQTLETYLTVSIEGRGAVRVRIAGKVDRI 888 Query: 960 QPDGLLRWRPSLLSVAQG 977 + G + R + Sbjct: 889 ERLGD-QIRIVDYKTGKV 905 >UniRef50_C3WKP8 DNA helicase II n=1 Tax=Fusobacterium sp. 2_1_31 RepID=C3WKP8_9FUSO Length = 929 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 60/628 (9%), Positives = 164/628 (26%), Gaps = 99/628 (15%) Query: 132 ADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYT---HQLGQPRWHRAN 188 +D FD + + D+ + ++ + + ++ + Q W R++ Sbjct: 111 SDFFDNFELMSGDYEQHFFIYSRLKEYKKLED-----YQKFFDNLSNNTGKYQGDWARSS 165 Query: 189 LYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYW 248 + I L + + + I ++ Sbjct: 166 FLKNKINDLNENAIDIENIQTS---DVYINFIKEAYKLYVKQLYEANIVDFSYLQVEFFN 222 Query: 249 GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLG 307 +K+ +L K+ ++ + + + + VG+ + + G Sbjct: 223 MLVKNKEFLEKINHDFEYIMVDEYQDSNKIQEKILLLISKTRKNICVVGDEDQSIYRFRG 282 Query: 308 RDYIYLLS-----DLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 +L+ D + + + + DI+E N+ ++ ++ + Sbjct: 283 ASSENILNFPKHFDEDECKIIILEENYRSVT-------DIVEFNNKWISSIDWQGNRFDK 335 Query: 363 NKRPLDPLD---SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYS 419 N + D ++ + ++ + + + + I V+ ++ Sbjct: 336 NIVSMRDTDILGKNVFHISGKTMDENIKNTVIFIKKLKQHNKITNYNQIAVLF---ANFK 392 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 A + + ++ + ++ ++ ED + + Sbjct: 393 NNSAKKLEVALKKENIEVYSPRTKVFFEMYEIKLTLGIILACFKKYFPEDSIDQYLTECI 452 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 ++ +L + + + L ++ Sbjct: 453 DFARLEIKKDSEFL-------------AWIKEKIENISEESFDSLNEIFYEFLNFTYYKN 499 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 +E + + + +LA L +++ + + E Sbjct: 500 V---------LNEETPVDSRANHNLAILSKIFKNFQKYVHYRKITAE------------- 537 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQR-FLAGP 658 + D L + E S+ + Sbjct: 538 -------------------------DDFSVVKYFFTGYLDILKESRVDEIFSEEDYPNEC 572 Query: 659 VNICTLMPMRSIPFKVVCLLGMN-------DGVYPRQLAPLGFDLMSQKPKRGDRSRRDD 711 + T+ + + F VV + +N D RQ + S K D+ + D Sbjct: 573 IPFLTIHQSKGLEFPVVIVFSLNSKPNRYEDDDISRQTSIDRLINSSSKLSENDKEKFDF 632 Query: 712 DRYLFLEALISAQQKLYISYIGRSIQDN 739 R F A A+ L +S I +N Sbjct: 633 YRK-FYVAFSRAKNLLVLSSYEMGISEN 659 >UniRef50_B8N0A9 ATP-dependent DNA helicase, putative n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8N0A9_ASPFN Length = 787 Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats. Identities = 37/325 (11%), Positives = 93/325 (28%), Gaps = 40/325 (12%) Query: 210 RVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPA------------YL 257 R+ + P L+A Q G + H F + Y + D L Sbjct: 5 RISYQKAHGVTPEDLEAKQMKGSKVLEHREFIQVYQAYESHLADSNLLDYDDLLLRCAQL 64 Query: 258 AKLLTR----QRRHSFEDRELPLFRDSENAGQLF-NSDGEQDVGNPLLASWGKLGRDYIY 312 + + ++ + + + VG+P + +G + Sbjct: 65 LRQHPECVSNVQSVLVDEFQDTNHIQYQLMNLFASQNRRITVVGDPDQSIYGFRSAEIKN 124 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPL-- 370 L + D + ++ + + + ++ E S + L P Sbjct: 125 LTRM----------QQLYSDTSVVLLEDNYRSSGSILSSAQDVIEQDSSRPAKRLQPTHS 174 Query: 371 -DSSITFHVCHSPQREVEVLHDRLLAMLE-EDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + + + E + + + + L D +++ + S Sbjct: 175 VGTMPVLRKLPTAEAEAQWIVLEIKRCIAMTGKLLKYSDFAILLRSAA-----LSRQIES 229 Query: 429 APADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEE 488 + +PY + ++ + L + ++ +L +++VP I EE Sbjct: 230 EMGKQGMPYRMVGGLRFFDRVEIKLLLDYLRVISQPGNTDALLRIINVP----SRKIGEE 285 Query: 489 GLRYLRQWVNESGIRWGIDDDNVRE 513 +R L ++ +V + Sbjct: 286 SIRSLMSGAEKANKPLWDFMKDVAQ 310 Score = 59.6 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 41/162 (25%), Gaps = 18/162 (11%) Query: 680 MNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDN 739 + +G+ P A D++R L A+ AQ LY+SY + Sbjct: 397 VYNGIIPHSRAEDS----------------DEERRLLYVAMTRAQALLYLSYPLEQSRSG 440 Query: 740 SERFPSVLVQE--LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPG 797 S + E + ++ + R + Sbjct: 441 ETTSVSTFLPEKIIESRFRLLGPNLHEQIVYAIADILRRPRPTLEAMLEGQVSLPSTLDD 500 Query: 798 ERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQR 839 + RE A + + + + P ++ Sbjct: 501 QWTVDGREAADAVFRWDGSRAVDGEEPSAKRPRYSRESSIST 542 >UniRef50_D0YYJ6 ATP-dependent DNA helicase PcrA n=5 Tax=Photobacterium RepID=D0YYJ6_LISDA Length = 774 Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 70/651 (10%), Positives = 165/651 (25%), Gaps = 84/651 (12%) Query: 213 ICGISALPPVYLQALQA------LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRR 266 + +S + Y ++A L + ++ + A + R Sbjct: 159 VFDLSDISSEYQFIIEAFRNFETLRQERKLLFFDDWLVETVKLLQNNEAIRQYYHQQCRF 218 Query: 267 HSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDA 325 ++ + + QL VG+ + G ++L+ Sbjct: 219 IVVDEFQDINTAQYQLLKQLLGPQSQLVAVGDVDQCIYKWRGSAPQFMLN---------- 268 Query: 326 FVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSI--TFHVCHSPQ 383 F +++ + A+A ++ +R+ S+ T + Sbjct: 269 FERDFAPAKTYSLSRTFRFGHSLALAASHLISNNRNRFHDFQTVSHESVSDTQIEVVGSE 328 Query: 384 REVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR 443 R+V + + LE+ +D+ ++V +F A + +PY + Sbjct: 329 RQVGEIAQAIQQFLEQ--GGQAKDVAILVRRWSQ-----TLLFELAFLTKKIPYQMPVPS 381 Query: 444 ARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIR 503 + + +L RF + F + L+ +E R Sbjct: 382 VLGHSREVRLLMDILGFAIGRFEQQSPQQRSSFLFNIMAFPHCYVPNKDLKPLCDELANR 441 Query: 504 WGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGH 563 WR +T+ Y+ + V Sbjct: 442 ----------------PIEQWRAYVTKAEKIYSALNLDSFIDRVELLITLRRKGQ----- 480 Query: 564 LASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEG 623 L+++R+ +E L+ W+ + + ++ Sbjct: 481 ----FKALDVYRQ-YRKESQLDNWIWKTEATASEI--------EEAVERLDSVETVLESM 527 Query: 624 LGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDG 683 + +Q+ V + T+ + F V L + Sbjct: 528 DQHCEKALQYFEYYTQ--QSTHHDQHQAQQPNINGVQVTTIFRAKGCEFSQVYLPYWDKD 585 Query: 684 VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS--- 740 +P + G + +++R L A+ A+ + Y + S Sbjct: 586 AFPYMN----------RSSAGLAADTEEERRLAYVAMTRAKDVARVYYTVEPKKKESYVR 635 Query: 741 -ERFPSVLVQE--------LIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDP 791 + S V E + + + Q LP ++ R+ + Sbjct: 636 ANKNASQFVLESKVDVAQTVGEKLYQEGELPHHKSPIVYGYYQRLGRLDDMAQPPKEREI 695 Query: 792 QNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWA 842 + + + ++ L T + L R Sbjct: 696 ELPSSDGAYQQYSYEWALNQPLPENADKLIRTLMRTKKQKYFETELARLLR 746 >UniRef50_A3IAC3 DNA helicase II n=1 Tax=Bacillus sp. B14905 RepID=A3IAC3_9BACI Length = 720 Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 69/620 (11%), Positives = 151/620 (24%), Gaps = 106/620 (17%) Query: 186 RANLYQRFIETLESATTCPPGLPSRVFICGISA---LPPVYLQALQALGKHIEIHLLFTN 242 + + + E L L + LP + + Sbjct: 134 KKRVLREIFEQLNDTKITEDQLDELLTYITFIKNKMLPEQEWDIANV---KVPRKVQILQ 190 Query: 243 PCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLAS 302 Y D + + + + + + +D QD Sbjct: 191 RYEEYKRTGSDHLLIDFDDMLLMANEIFTKNREVLAQYQRRYDYYFTDESQDTSPVQHEI 250 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHN-----------IQSDILELENRAV- 350 KL + L + Q + ++ PD LL + + + Sbjct: 251 IAKLVAVHQNLCVVADEDQAIYSWRGADPDYLLDFQKVFPEAQVLLMTQNYRSSASIVEP 310 Query: 351 AGVNIEEFSRSDNKRPLDPLD--SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDI 408 A + I+ + NK+ I+F + + + + L D+L + + T Sbjct: 311 ANMFIQRNKKRYNKQMFTENPAAEPISFKILENYHLQAKYLVDQLKNLSKRGST------ 364 Query: 409 IVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR-ARQSHPVLEAFISLLSLPDSRFVS 467 ++ + S P + A LP+ + D +H V+E ++ + L + Sbjct: 365 AILYRNNTSAIPLM-----DAIDRVGLPFYMKDSTIRFFTHWVVEDIMNFMRLAYN---- 415 Query: 468 EDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFG 527 + + +N + Sbjct: 416 ----------------TKNITVFEKIYRKMNAYITPAQLKALQR---------------- 443 Query: 528 LTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEW 587 + + +L + E E + + + + Sbjct: 444 ---------VPEEGCVFTQLLEHVELKDYQPEYIKRIRKTYDSIQ------FDKTTPTAM 488 Query: 588 LPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ 647 L R + + + + I+ + L Q Sbjct: 489 LEHIR-YDFGYERTLKKMSETLGFNYENLLDIVDVLGLIARHTQTM-TEFAGRLKQLEHL 546 Query: 648 ERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR 706 R S + + TL + + F V L+ + +G+ P + + Sbjct: 547 ARSSHIKKDLNAITLTTLHSSKGLEFDRVYLIDLIEGILPSEQEEEIEEET--------- 597 Query: 707 SRRDDDRYLFLEALISAQQKL-YISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE 765 LF + A + L ISY R + PS+ ++EL + E Sbjct: 598 -------RLFYVGITRAIRHLELISYSKR---FKTSVEPSIFMKELKQIVSPQEVPKKAE 647 Query: 766 ALNCDESEARVKAHLTCLHT 785 + + Sbjct: 648 KSPRKALKQYYNERTITTES 667 >UniRef50_C8X4N8 Putative DNA repair protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X4N8_DESRD Length = 913 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 70/671 (10%), Positives = 148/671 (22%), Gaps = 113/671 (16%) Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADR 433 + C ++E++ +LEE ++ I ++V ++ + + + Sbjct: 228 VACVPCADARQEMDDAARWARELLEESASIR---IGIVVPNLQAVREDVLEALEAVLEPE 284 Query: 434 YLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYL 493 L D + + V + R E L Sbjct: 285 RLLPWGGDTPS-----------CINVSLGGPVAETAVGRCALGLLRLGRTTFKTEDFGAL 333 Query: 494 RQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDES 553 + + +G + R L + Sbjct: 334 LRSRHWAG----------------GESEWAARAELEAAVYAVGEPQWTRTLAEFFLARHG 377 Query: 554 SGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIE 613 E L +L+ R + + E + V R + Sbjct: 378 ETDCPETARALHRFWARLDDLPRKQSWSQWAETFGEVLRSVGWPGASGQPSASYQAVEAW 437 Query: 614 QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFK 673 Q+ + + + L Q + PV + L+ F Sbjct: 438 QECLEGLEQFDQVL--EPAGYGEALQRLEQLARETLFQPESGHHPVQVLGLLEAAGSRFD 495 Query: 674 VVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALIS----AQQKLYI 729 + ++G+ D V+P P + + F + A ++ Sbjct: 496 ALWVMGLTDEVWPPAARPHPLLPHALQIHSDMPHCAAQRELRFARQVTHRLSTAAPEVVF 555 Query: 730 SYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 S R + E PS L+ + +L Sbjct: 556 SLPQRDG--DRELQPSPLLADHPRIARDELLPTTVPSL---------------------- 591 Query: 790 DPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFF 849 E L A++ E L TL+ P +AF Sbjct: 592 --------------WEQLGQAAEPHWELDEGAPALVEGTRLRGGTGTLKAQALCPFQAFG 637 Query: 850 QMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPY 909 + RLQ + L R + + L + + A Sbjct: 638 RFRLQAAAVRPPEP-------GITALERGNLVHKALETFWAEMQTRERLQGASAETIAAT 690 Query: 910 GAFGE-----------------IFWETQCQEMQQLADRVIACRQPGQSM-------EIDL 945 G E + + +L ++ A ++ Sbjct: 691 ARKGAQKGVEQLAERRPMTLTGRHRELEEDRLTRLLEQWAARELERTPFAVVEREHRVEA 750 Query: 946 ACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQL--------WLEHLVYCASGGNGESR 997 + G ++ +V R + + +Y + Sbjct: 751 SFAGARLRIVCDRVDRLDDGRLAVVDYKTGEIRVSDWFAPRLLEPQLPLYALLAETEVAG 810 Query: 998 LFLRKDGEWRF 1008 +F+ + Sbjct: 811 IFVARIKTGHL 821 >UniRef50_A9M3L9 Exodeoxyribonuclease V beta subunit n=30 Tax=Neisseria RepID=A9M3L9_NEIM0 Length = 1204 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 96/956 (10%), Positives = 211/956 (22%), Gaps = 166/956 (17%) Query: 146 LAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIET------LES 199 LAQ + L + L A + L + + A ++ + L + Sbjct: 279 LAQKSAAGQLPFLDKDTHD-RLLKLASDKLEAGLKKGKTPDAAVFAELQKLADFGRDLNA 337 Query: 200 ATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAK 259 R+ + I L L ++ + L + + Sbjct: 338 LEEAEEATMIRLQLDLIEYLN-RSLAEMKKSRRERGFDDLLLDVHTALTDNPHAETLARA 396 Query: 260 LLTRQRRHSFEDRELPLFRDSEN--AGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDL 317 + ++ + E + + VG+P A + G D L Sbjct: 397 VAENWETALIDEFQDTDPLQYEIFQKIFIAQNRPLFLVGDPKQAIYSFRGADIYAYLQAA 456 Query: 318 ESSQELD-AFVDVTPDNLLHNIQSDILELENR--AVAGVNIEEFSRSDNKRPLDPLDSSI 374 E ++ + L + L+ R + + E + + L P ++ Sbjct: 457 EDARHRYTLATNYRSHAALIGSIGALFRLKERPFVLENIGYSEVGAARAESRLSPKRPAV 516 Query: 375 TFHVCHSPQRE-----------VEVLHDRLLAMLEEDPTLTP---------RDIIVMVAD 414 H E + D + L E DI V+V Sbjct: 517 QVRWLHENDNEKANKDVLRRRAADYCADEIAHALNEAAGGRLNFKGYPLQSGDIAVLVRT 576 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 + + +A R + + R + + P A +L+ + + +L Sbjct: 577 HNE-----AVMVSAALKKRQVQSVLLSRESVFASPEAAALSALIGFWLEPRRAGTLRFVL 631 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 + +G D + + + W L Sbjct: 632 TSGI-------------------------FGYDAQQLHDFNQNESEILHWAESARTALDN 666 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 + + G + ++ + ++ G+ L+ R L + + Sbjct: 667 W---NQYGIFAAMQQFSQTHGIETRLLSR---------------NNGRSLTNYFQLL--- 705 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF 654 + + + + I+ D I Sbjct: 706 --ELLAAEDAQNRNPAALHKWLRDQISLADNNGG-----------------DNRAIRLES 746 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMND--GVYPRQLA-------PLGFD----LMSQKP 701 V I T+ + + + +V D P L + Sbjct: 747 DEDLVKIVTMHASKGLQYPLVYCPFAWDAQDTGPSDWQILHQSANRTELLAKAQLSEDEQ 806 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYL 761 K+ + L AL A+++L I + ++ + L++ ++ Sbjct: 807 KQYADEEMAERLRLLYVALTRAEEQLNIYAAYSTNTADTPL--AYLIEGSPQDSRETVRQ 864 Query: 762 PGDEALNCDESEARVKAHLTCLHT-----RMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 + + R L D + A S + Sbjct: 865 TYAQEKDGIAMLKRNWRRLADNAPAGTDFVFTEDAPPPAAYRGNADQTAEFAANSIPERG 924 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF-ILEGL 875 TL A P + + + +G Sbjct: 925 FRFVRHTSFTTLSRHTQTPDGSEEDACPSLDAAETSVPAMPSETPTASDGISIHNFPKGT 984 Query: 876 SRYQINQQLLNALVEQDDA--------ERLFRRFRAAGDLP------------------- 908 ++L A ++L + LP Sbjct: 985 QAGLCLHEILENFKFGQAAAGQETFITDKLKKYGFEEIWLPAVAEMAEACQKTPLTGAYG 1044 Query: 909 ------------YGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQ--ITG 954 G + A I + ++ L + V + G Sbjct: 1045 LSDILSECRCPEMGFTLHTEDFGLKRLRDWFARDDIRLPEVCRAAAETLDFHTVNGFLNG 1104 Query: 955 WLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPP 1010 ++ V D A + + + Sbjct: 1105 FIDMVCQDPDGNICVIDYKSNHLGTDA-SAYTQQAMDEAVAHHHYYLQALIYAVAA 1159 >UniRef50_A8SMD3 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMD3_9FIRM Length = 615 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 52/507 (10%), Positives = 138/507 (27%), Gaps = 99/507 (19%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 D L L R + ++ + E ++ + V + + + G Sbjct: 200 DKKLLKALKNRYKFFQIDEGQDTSTLQFEIIRKIVFPENNVFIVADDDQSIYSFRGASPE 259 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLD 368 LL+ F ++ P++ + + + +N I + + Sbjct: 260 NLLN----------FKNIYPNSKIFFMDKNFRSTKNIIKISNKIIQGNKIRYEKTSKHTT 309 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRD-IIVMVADIDSYSPFIQAVFG 427 S I + + L R+ + P + I ++ + Sbjct: 310 EESSQIMLFKVKNSIIQARELLKRISE-------INPNETIGILYRNN-----VSSLYVA 357 Query: 428 SAPADRYLPYAISD-RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDIT 486 + + + + + + S+ +L ++LS F Sbjct: 358 DILKNNDIDFFVKENKFDFYSNRILNDVKNILS-----------------------FSED 394 Query: 487 EEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQS 546 L ++ + Y + + + Sbjct: 395 TSDLEVFKRIYFKLN--------------------------------AYIKKDFITKLEY 422 Query: 547 VLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETE 606 + +L L + R + + + + +L D Sbjct: 423 KPYNQCILESLLDLDELNDFYLNKFTSLRNNFKRLKRM-KMEDKIDCILYEIGYGDYLDN 481 Query: 607 AAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMP 666 +I + + D ++ +L + + ++I T+ Sbjct: 482 FNDFSNLN--YNLIFDLIKYLSKDLKTFGEFIEK-LDKLKELLKNASSSKSNISISTIHS 538 Query: 667 MRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQK 726 + + + V ++ + DG +P++ F D +++R LF A+ A+++ Sbjct: 539 AKGLEYDNVFIIDLIDGEFPQKSVLNSF----------DEKLLEEERRLFYVAMTRARKR 588 Query: 727 LYISYIGRSIQDNSERFPSVLVQELID 753 L++ ++N S+ EL + Sbjct: 589 LFLF--TIKERNNLPVESSIFYNELKN 613 >UniRef50_C5V6X1 DNA helicase/exodeoxyribonuclease V, subunit B n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V6X1_9PROT Length = 902 Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats. Identities = 109/909 (11%), Positives = 227/909 (24%), Gaps = 133/909 (14%) Query: 146 LAQWETGHLVE-GLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCP 204 LA W + + L++AL + W +L + + ++ T Sbjct: 34 LADWAQSIPLAVSVQSDTQRLLTLYQALRDRNWFPDADLW---SLSRELLTLMDELTRHH 90 Query: 205 PGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQ 264 LP + + W + L Q Sbjct: 91 VSLPESTEAFSRQLVAAYQ-------AQSGVAMQFEARVVHELWYAMAAHDELDVTAAYQ 143 Query: 265 RRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELD 324 +R + +++ + L + + L+ + Sbjct: 144 QRLAILAQQVTMPLFVLQTCDLDAPE--------------------MRFLAACRERVRVT 183 Query: 325 AFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR 384 F LL L + S + ++ L I H ++ Sbjct: 184 VF---DLRELLGMDAGCALLSAALQQELHGEDLRSAAQSRVAGVALTDRIGLFGAHGMEQ 240 Query: 385 EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 E + ++ L E T I V+V D + + + Sbjct: 241 EAQAADVQVRRWLLEGKTA----IAVVVQDR-----MVARRLRALLERARVMVQDETGWT 291 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 + V + L F +DVL LL P L A + + Y + + Sbjct: 292 FATLSVSTVLMRWLEAVQGDFYYQDVLDLLKSPFLFAENQVLRKQAAYQFEQLVRRHGVV 351 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 ++++ A A +++ +++ L+ L Sbjct: 352 LHLNEHIAA----------------------AEREAPELVPALVRLRQAARLLTARHASL 389 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 + L L+ L +AA + Q E Sbjct: 390 SGWLSALHQSLDLLGVIH-------------------GWRQDAAGQQLMQLLALWQEELQ 430 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGV 684 + S R L+Q+LD + PV L R F V LLG + G Sbjct: 431 AD--TTSCSFSEWRRWLSQQLDLNTYRDLSVDSPVLFTHLAATRWRCFDAVLLLGCDAGH 488 Query: 685 YPRQLAPLGFDLMSQKPKRGDRSR--RDDDRYLFLEALISAQQKLYISYIGRSIQDNSER 742 P + + + + G + D L +L++ + ++ ++ + Sbjct: 489 LPAPVNAGLWFNDAVRTTLGLPLSCVQQDQVRDDLLSLLAMNGTVLATW--QANCNGEPN 546 Query: 743 FPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSY 802 S + L + D + + + Sbjct: 547 LLSPYFEMLRAMHLLAFGHDLMNVELGGLLPLA-------QVRIQDSDRKGLPRTTKVLH 599 Query: 803 AREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDS 862 + A P +P+ + A P + F + L +N + Sbjct: 600 TKFLREGCRIQDPAKMPRPVVPPELIPQKISPSGYNSLVACPYQYFARHVLHLNELDDVR 659 Query: 863 EIPDTEPFILEGLSRYQINQQLLNALVEQDD---------AERLFRRFRAA---GDLPYG 910 E L+ ++L + AER+ RR L + Sbjct: 660 ED-------LDKRDYGTWVHEVLQRFHAEIPQLGSRDKGEAERVLRRISDEVFANALAHD 712 Query: 911 AFGEIFWETQCQEMQQLADRVIA-----CRQPGQSMEIDLAC-NGVQITGWLPQVQ--PD 962 + + + + R + ++A + + G L +V + Sbjct: 713 YLAQAWLLRWQGLIPAYLHWQLEIEADGWRYHAAEVPFEVAVSGNLLLRGRLDRVDVSVE 772 Query: 963 GLLRWRPSLLSVAQGM--------QLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAE 1014 + L A ++ F+ D + ++ + Sbjct: 773 NADAFAVIDYKTQSIQGLKNKLKSPGEDVQLACYAHVQAAKTAAFVSLDDD-TVQAVSPD 831 Query: 1015 QALHYLSQL 1023 + + L+QL Sbjct: 832 EEIDELAQL 840 >UniRef50_C6QAP4 Double-strand break repair helicase AddA n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QAP4_9RHIZ Length = 1196 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 93/865 (10%), Positives = 193/865 (22%), Gaps = 177/865 (20%) Query: 256 YLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS------------DGEQDVGNPLLASW 303 L KL ++ + + L + VG+ + + Sbjct: 405 VLFKLDGGLDHILVDEAQDTSPEQWDIVKALAHEFFMGAATRDGSPRTVFAVGDEKQSIY 464 Query: 304 GKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDN 363 G D + D + + A + + Sbjct: 465 SFQGADPKMF--ADAGIRFAALARDAGLIWKSIELTMSFRTVTPVLAAVDAVFADAAKTP 522 Query: 364 KRPLDPLDSS---ITF----------------HVCHSP-------------QREVEVLHD 391 I P R E + D Sbjct: 523 GLTAGGPPPKHNAIRLGHAGLVEMWPTEKPDDLNAADPWAPLSDTSEHSPANRLAERIAD 582 Query: 392 RLLAMLEEDPTL-------TPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA 444 + L+ L DI+++V + ++ + A A R + A SDR A Sbjct: 583 TIKGWLDRGERLESQGREIRAGDILILVRKRNPFAVPMVA----ALKRRGIAVAGSDRIA 638 Query: 445 RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRW 504 ++ ++L + A+L P+ Sbjct: 639 LTDQIAVQDLMALGDFLILPEDDLALAAVLKGPIF------------------------- 673 Query: 505 GIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHL 564 G DDD++ + + W L + Sbjct: 674 GFDDDDLLAIAPGRKSKTLWSALLD---------------------------STGVKPEY 706 Query: 565 ASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL 624 L WR P E + V + A + L Sbjct: 707 RDAAETLKRWRAKADFTPPFEFFSSVLDRDGAREKMLRRLGPEAA----DVIDEFLDLAL 762 Query: 625 GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG----M 680 G L+ EL + + V + T+ + + +V L Sbjct: 763 SYDDGTPPSLTQFLAELRAIAPEVKRDMDHGRDEVRVMTVHGAKGLEAPIVFLPDTCTTA 822 Query: 681 NDGVYPRQLAPLGFDLMSQK--------------------PKRGDRSRRDDDR-YLFLEA 719 + + L L +RG +R ++R L A Sbjct: 823 SGDLSAASLVRLSGLPRPDHIPEPIVWTVKGTSRLEAVTIARRGREAREHEERNRLLYVA 882 Query: 720 LISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAH 779 + A+ +LYI + R S + + + D E A Sbjct: 883 MTRARDRLYI----AGFEGKKGRAESCWYDAISEALLPVAEEIDDNGKKVWRIETAQTAE 938 Query: 780 LTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQR 839 L ++ + S P S + Sbjct: 939 LDQSRGEKTRQLESEERPAFASERARPEPKLSVPLAPSRLEPYAPDAEGEP------IMS 992 Query: 840 FWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFR 899 A + D+ P L R + LL L A Sbjct: 993 AKADAAATY------------DAPSPLAGNSEHRFL-RGTLTHALLQHLPS-VAASGREA 1038 Query: 900 RFRAAGDLPYGAFGEIFWETQCQEMQQLADR--VIACRQPGQSMEIDL---------ACN 948 A + +E + P E+ + + Sbjct: 1039 IATAFVAKRGAVLSRKARDGIVRETLAILSSADFAPLFGPNSMAEVPIAAVIPRPSGSGP 1098 Query: 949 GVQITGWLPQV----QPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDG 1004 + ++G + ++ ++ ++ + ++ + +L A+ ++ + Sbjct: 1099 ALDLSGQIDRLAVTDDEVLIVDYKTNRPPPSEVRFVAPAYLYQLAAYRLALGEIYPGRRV 1158 Query: 1005 EWRFPPLAAEQALHYLSQLIEGYRE 1029 + + + + +++GY+ Sbjct: 1159 KAALLWTDGPRLMEVPADVLDGYQS 1183 >UniRef50_C3WAC5 DNA helicase II n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WAC5_FUSMR Length = 939 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 69/627 (11%), Positives = 162/627 (25%), Gaps = 79/627 (12%) Query: 237 HLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDV 295 + FT R + + L KL R ++ + + L V Sbjct: 196 LMDFTTIQRELYRILHREEVLEKLQNRIEYIMIDEYQDTNTIQEKIIFMLGAKKENICVV 255 Query: 296 GNPLLASWGKLGRDYIYLLSDLESSQ-----ELDAFVDVTPDNLLHNIQSDILELENRAV 350 G+ + G +L E + +++ ++ DI+ NR + Sbjct: 256 GDDDQGIYRFRGATVRNILRFPERFEKGRCKKINLDINYRSH-------EDIIRFCNRWI 308 Query: 351 AGVNIEEFSRSDNKRPLDPLD----SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPR 406 +N EF P + + S + S + + ++ + + Sbjct: 309 KLINWREFRYEKEIVPPEDKEFSKTSGVIRIGGDSEKHWKDNIYKFIKKLYTTKKISDYS 368 Query: 407 DIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFV 466 + + + + + +P + ++ I L + + Sbjct: 369 QVAFLFRSV---QNPNVKELKNYLEECGIPIYSPRSKDFFDRIEIKLTIGALLVYFPQCK 425 Query: 467 SEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRF 526 + + + + +E +W + + + R Sbjct: 426 YLVLDEVQNRGQSVFYYYKDCLTQLKKVIQNDEELYKW-LVERRKANASEEVITIPSLRK 484 Query: 527 GLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEE 586 +L ++ + + +L L + R E +E Sbjct: 485 IFYSLLQFE-------TFKKFIKLESEGVNEGRETYNLGVFTEILEKFERLSKVEDIAKE 537 Query: 587 WLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD 646 + ++ + +R+D Sbjct: 538 EIEKVVRYFFMVYMK-------------------------------------NLYQKRVD 560 Query: 647 QERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG-- 704 + + F G + T + + F +V + ++ P + D++ + + G Sbjct: 561 EYENKEEFPLGAIPFLTFHQAKGLEFPIVVVGSLDSS--PVERGKTEEDILEELLRLGDD 618 Query: 705 ----DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIG---- 756 DR D ++ A AQ L ++ I N PS + + + I Sbjct: 619 YEPRDRKNIFDFWRIYYTAFSRAQNLLVLTSIENRSGRNE--LPSRTFRPMYESIPYVDD 676 Query: 757 QSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKA 816 + L E +E + T F P Y+ + + P Sbjct: 677 ERFQLKNLEVEPLKVTENKELLSYTGHILLYEFCPLKYRFIKDFKFKALSNPKTYYGIFV 736 Query: 817 HSEFVQPLPFTLPETVPLETLQRFWAH 843 H + L E+L+ + Sbjct: 737 HKVIERIHKEFLSGIFQRESLKELIEN 763 >UniRef50_C6P8R0 ATP-dependent nuclease subunit B-like protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P8R0_CLOTS Length = 1053 Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats. Identities = 83/707 (11%), Positives = 193/707 (27%), Gaps = 108/707 (15%) Query: 336 HNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLA 395 N+ +DI E+ + + S + D SI S + EV + Sbjct: 250 FNVNNDIYEMIEVNHDVKKVATYIYSGETVL-NGEDLSIKIMNSPSIEHEVRETARLIKR 308 Query: 396 MLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 + D + P I V + +ID Y I +F +P I+ + P+ Sbjct: 309 KIVFDK-INPDRIAVFIKNIDDYRTQIIDIFDE----MNIPVKINRGIKLSTMPITNDIY 363 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 +L+S + E + ++ L + R ID + + + Sbjct: 364 NLISYKLN-HDYESFVNIMTSKFLVP--------------YEISKRSREIIDLLSGIDRD 408 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 L E + + + E + + + Sbjct: 409 KDNFEDEFVTAMKDDKSLNATFEFLKRYVDVFINFREVPYKDTKE------FVESVLKVI 462 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 L ++ + DM A+ I+Q + + Sbjct: 463 DLLE----IDFNIKALFDMGIIRSSDFISNVKALETIKQILNKELEIKKQYGEPSIDDIE 518 Query: 636 LLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 ++++ L +S R L V I + R + VV +LG+N+GV P + Sbjct: 519 NFQNDILDMLSNFDVSIRNLDFEGVRIISPDLARGQMYDVVFILGVNEGVLPSTKSINPI 578 Query: 695 DLMSQKPKRGD--------RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSV 746 +S + + + ++ F + SA +++Y+SY D S Sbjct: 579 FDLSDEEYLEKHGIYMLSRKWEFEREKVRFNACIASALKEVYVSYRTTDE-DGCNMIKSP 637 Query: 747 LVQELIDYIGQSHYLPGDEAL-----------NCDESEARVKAHLTCLHTRMPFDP---- 791 + +L + + + + + + + + D Sbjct: 638 FIDDLQNLFDEKSKERLIAPIVYMKDRFAFECDAASKDEALLFMIDSKWNKRQGDANTIY 697 Query: 792 ---QNYQPGERQSYAREWLPAASQAGKAHS----------EFVQPLPFTLPETVPLETLQ 838 +SY+ A+ + + + L + +L Sbjct: 698 SNILENDLYLTKSYSYINFSASIEKKRRANCEVDNHMGIISKDANLKELSDIHLSASSLN 757 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL------------- 885 + P + F + L ++ E E + + ++L Sbjct: 758 SYVVCPFKFFIETLLNLHVSDEFIESKKS---------IGSLYHEVLMKYYKDNLDLYDV 808 Query: 886 -NALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEM-QQLADRV-------IACRQ 936 + + E + D+ + + F+ Q + +++R+ Sbjct: 809 NEDRLGEIIDESFEKITGIENDIIFDKIKQEFYNVVFQLVKDDISNRLYYYNKTGAELIP 868 Query: 937 PGQSMEIDLAC--NGVQITGWLPQVQPDGLLR------WRPSLLSVA 975 + ++ G G + ++ + + + Sbjct: 869 SIFEKKFEMKDHYGGNIFHGKIDRIDLERNIDGKFTGKYVIYDYKSG 915 >UniRef50_C0GSZ0 UvrD/REP helicase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GSZ0_9DELT Length = 1142 Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats. Identities = 80/672 (11%), Positives = 168/672 (25%), Gaps = 113/672 (16%) Query: 213 ICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDR 272 + + L LQ ++ + T + D L +R + ++ Sbjct: 373 LFDVLRLAAACLQLEFQDQGSVDFTEITTRARQALGTDEDPTDLALVLDSRIQHLLMDEF 432 Query: 273 ELPLFRDSENAGQL------FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAF 326 + + L + VG+P+ + +G + L + Sbjct: 433 QDTSISQYQLLLALTAGWTPGDGRTFFAVGDPMQSIYGFREAEVGLFLQARSQGLD-HIP 491 Query: 327 VDVTPDNLLHNIQSDILELENRAVAGVNIEEFSR--------SDNKRPLDPLDSSITFHV 378 ++ + Q+ I++ N+A V E + + D ++ H Sbjct: 492 LEPLRLTVNFRSQAGIVDWANQAFPRVLPEVEDQMTGSVPYSGSHAFLPPLEDPAVQVHP 551 Query: 379 CHSP--QREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLP 436 Q E + + +EDP + ++V + A L Sbjct: 552 FFDADFQPESSRIVSLVQQARQEDPG---GTVAILVRSRPHLQAALP-----ALRQSGLE 603 Query: 437 YAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQW 496 Y + PV++ SL + LA+L P Sbjct: 604 YQAVEIDPLSRRPVIQDLCSLARALTHPGHNLAWLAVLRAPWC----------------- 646 Query: 497 VNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGL 556 G+D +++ L A + + D S L Sbjct: 647 --------GLDLEDLAIL---------------------AADKDAFIVNRIQDQDILSSL 677 Query: 557 IAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQW 616 + L + L + + + A PD + + Sbjct: 678 SPQGRRRLDRVREILLKFLQQRQRSG----LRSQVESCWKALGGPDCLHSQSQRRDADVF 733 Query: 617 QAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGP-VNICTLMPMRSIPFKVV 675 ++ + L + DEL + AG + + T+ + + F V Sbjct: 734 FRLLQQRLEHSPH------RVVDELENAVAGLYAGPDTSAGQDLQVMTIHKAKGLEFDTV 787 Query: 676 CLLGMN--------------DGVYPRQLAP-----------LGFDLMSQKPKRGDRSRRD 710 + G+ + PR + + + R Sbjct: 788 IIPGLGRAPGSDENPLLVWMERTSPRGHTDLLMAPKTATGEDKDPVYAYIQRLMARKTSH 847 Query: 711 DDRYLFLEALISAQQKLYISYIGRSIQDNSERFPS------VLVQELIDYIGQSHYLPGD 764 +D L A A+++L++ + P+ L + D ++ P D Sbjct: 848 EDGRLLYVACTRARKRLHLLGHTGLTEKGLPSKPAGGSLLESLWPAVKDEFERAAATPRD 907 Query: 765 EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPL 824 +A +E A L LH + + A Sbjct: 908 DADTREEHGASAGQTLYRLHQDWQPPRLPAGITTPSDSRPDPGQESIVFDWAGETIRLAG 967 Query: 825 PFTLPETVPLET 836 + + Sbjct: 968 TCVHRWMLTMAE 979 >UniRef50_Q1Q555 Similar to DNA helicase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q555_9BACT Length = 641 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 89/653 (13%), Positives = 173/653 (26%), Gaps = 90/653 (13%) Query: 111 LRHYLTDDSDKRKLFQLSSKAADLFDQY---LVYRPDWLAQWETGHLVEGLGEAQAWQAP 167 + + + + +L S AA+L Q+ L +RPD ++ Sbjct: 71 VEKLVPGELSRVRLTTFHSYAAELLQQHGNHLSFRPD----FQILSNDADREALLDDVLG 126 Query: 168 LWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQAL 227 + + Y+ R +E L I L VY Sbjct: 127 RLRKDMAYSLPDHFKAAQLLPAVTRLLEQCIPPDQAAVVLQQANVENAIP-LARVYAAYR 185 Query: 228 QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTR-QRRHSFEDRELPLFRDSENAGQL 286 +AL H+ L F + + +L K + + + ++ + + Sbjct: 186 EAL--HLTNSLDFPSLIAESLDLLDKYPFLVKHIRKVYKHILIDEFQDTNHSQYRILSLI 243 Query: 287 FNSDG--EQDVGNPLLASWGKLGRDYIYL--LSDLESSQELDAFVDVTPDNLLHNIQSDI 342 D V + + G + L D EL + L+ + + + Sbjct: 244 AQPDPSTLFVVADDDQIIYQWNGASPERIKALRDDFGVSELQLPENYRCPPLVIELANAL 303 Query: 343 LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPT 402 +E +N + + E E + + + T Sbjct: 304 IE------KNLNRSAGKKPLKAVKQGEGGDVVRVFRFDDVDGEAEWIAQDIAKKTPQLRT 357 Query: 403 LTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPD 462 D V+ + + G +P + R+ L ++L L + Sbjct: 358 ----DCAVLARTKK-----LLDLAGRKLEGAGVPVYYAARKDEFKSAPLRMLHAILRLVN 408 Query: 463 SRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQH 522 S + + L L + + R D ++ Sbjct: 409 STEDKQSLARLSKAFY----------ELEGISIELAPVLSRASADGKDL----------- 447 Query: 523 TWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQER 582 L L A E L L+ L +L W Q Sbjct: 448 -----LRCWLDEVKRRDALEEETLRLLETGIKPLLNSLNYR--DFADKLLKWAEACQQTS 500 Query: 583 PLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELA 642 +E + W+ ++AE G+ V L L EL Sbjct: 501 RPDE-----------------NAFNEFDEEREVWKLLLAEITKKFDGEDVSLHQLLHEL- 542 Query: 643 QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPK 702 D + V T+ + + F V L+G+ + P A D + Sbjct: 543 ---DLTSKTLPKPPEAVPCFTIHASKGMEFGQVYLMGLVEDQLPSWAAVKKGDNSLE--- 596 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYI 755 ++R A+ AQ+ L +++ + + PS + E+ + Sbjct: 597 ------MQEERRNCFVAITRAQESLTLTFSAQ--VFGWPKQPSRFLSEMGIEL 641 >UniRef50_A5D1P3 ATP-dependent helicase/nuclease subunit A n=2 Tax=Peptococcaceae RepID=ADDA_PELTS Length = 1269 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 115/1061 (10%), Positives = 250/1061 (23%), Gaps = 193/1061 (18%) Query: 69 IWDMFVRVLPEIPKESAFNKQS-MSWKLMT---------LLPQLLEREDFTLLRHYLTDD 118 + + ++ + +L+ L + F+ L+ +D Sbjct: 248 ALRIAREPGGPQAYLANLEQEHDLVCRLLQSCRTNAPWAELYSYFKEVVFSPLKQCRKED 307 Query: 119 SD-----KRKLFQLS--SKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKA 171 +D + + F+ S K + +Y P+ L + + A L + Sbjct: 308 ADLKLAGQARNFRESAKKKVMQVKSRYFSLPPEDLCA-----DLRRMAPLIKELAGLVRE 362 Query: 172 LVE-YTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVF-----------ICGISAL 219 Y N + + + + +PS+V + + Sbjct: 363 FDATYRKAKAARGVVDFNDLEHYCLQVLAEKGPSGAVPSQVAHELQEKFVEVLVDEYQDI 422 Query: 220 PPVYLQALQALGK----HIEIHLLFTNPCRYYWGDIKDP-AYLAKLLTRQRRHSFEDREL 274 V LQ + + + ++ Y + +P +L K + Sbjct: 423 NAVQETILQMVSRKGEGQSNLFMVGDVKQSIYRFRLAEPGLFLKKYASFSAGTGGGQGRR 482 Query: 275 PLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL 334 + + Q S + + G++ +L + + + Sbjct: 483 LALTANFRSRQGVVSAVNFIFKQIMTPAVGEMAYGSDAMLVYGADYPPVPEGQGNYEEAV 542 Query: 335 LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 L L R AG + + + + Q+E ++ R+ Sbjct: 543 E-------LHLVERGPAGKDGGGDDPAGEEADGGVEAVEEIEEELEAGQKEARLVARRIK 595 Query: 395 AML-----------------EEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPY 437 +L ++ LT RD+ V++ Y+ F +P Sbjct: 596 ELLGGSPGGEHALEIYDRELKKYRPLTYRDVAVLLRATAGYAN----SFVEEFRREGIPA 651 Query: 438 AISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWV 497 +E ISLL + D+ + +L P + Sbjct: 652 YAELSTGYFESTEVETVISLLKVIDNPRQDIPLAGVLRSPAV------------------ 693 Query: 498 NESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLI 557 G+ ++ + L + + + L G Sbjct: 694 -------GLKAGDLARIRLASPRGDFYDAVVAASLAG----------------------Q 724 Query: 558 AELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQ 617 EL LA L +L WR Q + V RD F + Sbjct: 725 GELSERLADFLKKLEEWRTIARQGTLADLIWAVYRDTGYYDFTGCLPGGGQRQANLRALH 784 Query: 618 AIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ--RFLAGPVNICTLMPMRSIPFKVV 675 + + + L + ++ V I ++ + + F VV Sbjct: 785 DRARQFETTAFRGLFLFLRFIERLREGGRDFGAARLLSEKENVVRIMSIHKSKGLEFPVV 844 Query: 676 CLLGMND-----------------GVYPRQLAPLGFDLMSQKPKRGDR-----SRRDDDR 713 + G+ G+ P+ + K + ++ Sbjct: 845 FVAGLGRNFNFRNLNKAVLFHKDLGLGPQLVDAEARVTRPTAAKLALKHRLKMEALAEEM 904 Query: 714 YLFLEALISAQQKLYISYIGRSIQDNSER-----------FPSVL-------VQELIDYI 755 + A+ AQ+KL + R++ + R P + L+ + Sbjct: 905 RILYVAMTRAQEKLILVGSARNLPGCARRWCGPAGTAGWALPDGFLAGAGTCLDWLMAAL 964 Query: 756 GQSHYLPGDE------ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPA 809 + E A + + + R P Sbjct: 965 ARHRDGAAIRELAACAEEPPAEVAADRSRWRVFFSDSRGRSAEMAEEPVLLAKVRRMEPL 1024 Query: 810 ASQAGKA-------HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNF---RT 859 A + P + L+R + Q T Sbjct: 1025 EPAGPLAGMIKARLEWSYPAIAVLGRPAKAAVTELKRRFDQLAAGEEQYGEGHFESFRLT 1084 Query: 860 EDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAE------RLFRRFRAAGDLPYGAFG 913 + E L + ++ L + ++ P A Sbjct: 1085 AGRPLFMQEKRGLTAAEAGEALHLVMQHLDLTGSLDITAVRSQIEDMVWRELLTPEQAAA 1144 Query: 914 EIFWETQCQEMQQLADRVIACRQPGQSMEIDL--------------ACNGVQITGWLPQV 959 + L R++A Q + + + V + G + + Sbjct: 1145 VPAEKIAAFFAGPLGRRLLAGFQVLRELPFTMAVQAAEIYPELVPYPGEAVLVQGVIDCL 1204 Query: 960 QPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFL 1000 +G + E G + Sbjct: 1205 VDEGDGYLL-LDYKTGKRPLGRPEEAARRYCGQLNIYARAV 1244 >UniRef50_A9WPI7 ATP-dependent DNA helicase n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WPI7_RENSM Length = 1073 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 110/891 (12%), Positives = 227/891 (25%), Gaps = 116/891 (13%) Query: 170 KALVEYTHQLGQPRWHRANL---YQRFIETLESATTCPPGLPSRVFICGISALPPVYLQA 226 AL H A L +++ + L LPS + G P + A Sbjct: 149 HALGLAPGPQWPEELHEALLTRGFRQEVRQLFDRIVDNGLLPSDLVELGRENNRPDWQAA 208 Query: 227 LQALGKHIEIHLLFTNPCRYYWGDIK--------DPAYLAKLLTRQRRHSFEDRELPLFR 278 Q ++ ++ L C G ++ +P +LA+ R +D + Sbjct: 209 AQLYREYRDLIELKNPGCYDPAGIVRAASELFDANPDWLARERERHSLILVDDLQETGRA 268 Query: 279 DSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNI 338 ++ P G G + + +A + + L + Sbjct: 269 VHGLLRRIGTGQEMLATACPDTVVQGFRGARPDRVGLVRDELGANEAVL-SSSHRLNQPL 327 Query: 339 QSDILELENRAVAGVNIEEFSR----SDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLL 394 + L + R + + +D + ++ V S ++ + +R++ Sbjct: 328 AAAWLRIAERIAQSKGGHKARQLDFPADEPTVGPESEQVVSGVVVGSDVQQRRFVAERIM 387 Query: 395 AMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDR-RARQSHPVLEA 453 D RD+ V+V + FG +P IS + P + Sbjct: 388 H-FHVDRERPLRDMAVIVRTGAQVA-----AFGRYLVSHGIPVRISAAETPVRDEPAVRP 441 Query: 454 FISLLSLPDSR--FVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNV 511 + + + +E + LL + + LR +G G D+ V Sbjct: 442 LLLAYRVAVTPELLDAELAVDLLTSRIGGLSSVQIRRVRKLLRAEEIANGGVRGSDELLV 501 Query: 512 RELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQL 571 L+ PA + G A + G + V Sbjct: 502 EGLQRPA-------QLAALGVDGRAAARMATVLAAGSQAMTEPGANPQSV---------- 544 Query: 572 NIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDA 631 EW A DA A ++ A + A Sbjct: 545 --LWALWDATGLSTEWA-------TAALREDANGSRADRDLDAMMALFQAAERYVEQSPA 595 Query: 632 VPLSLLRDEL--AQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 + L + ++ V + T + VV + G+ +GV+P Sbjct: 596 ASPEAFVEYLLNQELPMDTLAARAESGDAVEVMTPASAAGRQWPVVIVAGLQEGVWPNNR 655 Query: 690 APLGFD---------------LMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 + R R D+ F A+ A ++L + Sbjct: 656 LRGELLGSQYLVEVLELGAASARRLAAVQRMRDIRYDELRSFATAISRASERLICVGVSS 715 Query: 735 SIQDNSERFPSVLVQEL-IDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQN 793 + PS + + I + L + ++ + A L + R + + Sbjct: 716 EDE-----QPSGFLDLVDPWPIEDNDGLRPLTDVRRPKTLRALVAELRQANERGANERDS 770 Query: 794 YQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE-------------TVPLETLQRF 840 E+ + + A P V ++ Sbjct: 771 DDRAEQPAAEAARVLAELARNAVPGADPSSWWGLAPLSSTDPILPVDAVVPVSPSKIEAV 830 Query: 841 WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR 900 + F Q S + + L + E L Sbjct: 831 HESALSWFLQAAGGEAQLDL-------------ARSLGTLIHGIAQDLPAGNAEELLAEL 877 Query: 901 FRAAGD--LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME-------IDLACNGV- 950 LP + +++LA + G + I++ + Sbjct: 878 ANRWPALGLPENWETAAQLRRAERMLRKLAGYLRLISAQGHELVGVEQGFGIEVPGARIA 937 Query: 951 QITGWLPQVQPDGLLRWRPSLLSVAQ------GMQLWLEHLVYCASGGNGE 995 + G + +++ L + ++ + Y + +G Sbjct: 938 ALKGIVDRLELTAEGTLIVVDLKTGKNKPTAAQVEQHPQLGAYQVAAKHGA 988 >UniRef50_A1VCM0 UvrD/REP helicase n=3 Tax=Desulfovibrio vulgaris RepID=A1VCM0_DESVV Length = 1152 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 105/899 (11%), Positives = 198/899 (22%), Gaps = 155/899 (17%) Query: 190 YQRFIETLESATTCPPGLPSRVFICGISALPPVYLQAL---QALGKHIEIHLLFTNPCRY 246 + F+ L + T L + I + + + L Q + LL R Sbjct: 296 FSAFMAALAAFRTRGRLLQRALAIMPLVGIAETLARRLPDYQLREGKVPAQLLPQMARRV 355 Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-----GEQDVGNPLLA 301 G+ ++ TR ++ + L VG+ A Sbjct: 356 LDGEYGVSEAFCRMGTRLAHILVDEFQDTSKDQWAAIQPLAVECLSRGGSLTWVGDVKQA 415 Query: 302 SWGKLGRDYI---------YLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENR---- 348 +G G D LL+ + + + +D+ L Sbjct: 416 IYGWRGGDSALFDAVLRDGELLAIAGDGISGTLPRNWRSRPEIVHFNNDVFALLGDEAHA 475 Query: 349 -----------------AVAGVNIEEFSRSDNKRPLDPLDSS--------ITFHVCHSPQ 383 + A + + D +T + Sbjct: 476 TTVLRAMLPEGTPPDVFSEAVDELARAFTGAAQETPPRGDDESQEEGFVRLTHVAAFDSE 535 Query: 384 REVEVLHDRLLAMLEEDPTLT--PRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD 441 + L ++ D L RD+ V+V + + +P + Sbjct: 536 ELDAEVKTTLRSLFMGDLALRRRWRDVAVLVRTNGEAGRV-----ATWLMEWDIPVVTEN 590 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 HP++ ++LL Sbjct: 591 SLRLADHPLISQTVALLGF----------------------------------------- 609 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 L+ P W F LLG A L L Sbjct: 610 ------------LDYPRDDLAFWEFAAGPELLGDAAGLDAPAMDDWLAEGGRGPLFTRFR 657 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIA 621 W L R++ F + D E A + + Sbjct: 658 DA---FPAVWRRWIAPFYSRAGLMSVYDTVREVYTRFRVFDRYPEDAG-----FLRRFLE 709 Query: 622 EGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN 681 A+ V LS D + E++ V + T+ + + F VV + + Sbjct: 710 VVHAAEGQGLVSLSTFLDFWKRTGGDEKVPMPEGMDAVRVMTMHKAKGLEFPVVVIPFHH 769 Query: 682 D----GVYPRQLAPLGFDLMSQK-PKRGDRSRRD------DDRYLFLEALISAQQKLYIS 730 P ++ G DL+ + P+ G + ++ A ++L+ Sbjct: 770 QADRADDTPVRMEVEGLDLLVPRCPEMGKPYYEAFAASVREQLHVLYVAWTRPVEELHAF 829 Query: 731 YIGRSIQDNSERFPSVLVQELIDYI------------GQSHYLPGDEALNCDESEARVKA 778 R S L++ L + + A + E+ + Sbjct: 830 ITERKTGKGR----SALLEGLKVLLGLCGVPETWGTWERGTIPASALADSTTETMPEGRP 885 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPE---TVPLE 835 P + PAA T P+ Sbjct: 886 DQPESTPHAMASPTLADSAPADAAPVVLAPAAQTVPPPQPAASACASETAPQATGHDTPS 945 Query: 836 TLQRFWAHPVRAFFQMRLQVNF----RTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQ 891 + A E F R + L AL Sbjct: 946 LMVDAAASIPAPASTPDDDWRPMQWLPRLKIFRNQLEEFTFTERRRGMLVHACLEALHPT 1005 Query: 892 DDAERLFRRFRAAGD------LPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDL 945 R G +P T + + R I Sbjct: 1006 GAPREDAARAVRHGIRAFPLPVPDEDAVAAELTTMLEWYAAQPETAHWLRHGTPEQGILD 1065 Query: 946 ACNGVQITG-WLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKD 1003 A + T ++ ++ ++ S Q+ + + + + D Sbjct: 1066 AQGRLHRTDLFVDDGNVRVVVEYKTGAPSPDHIEQVHRYLSLLLDADPRPVHGVLVYLD 1124 >UniRef50_C8ZW81 UvrD/REP helicase n=4 Tax=Enterococcus RepID=C8ZW81_ENTGA Length = 1226 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 104/975 (10%), Positives = 243/975 (24%), Gaps = 170/975 (17%) Query: 127 LSSKAADL-FDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWH 185 L + L FD+Y YR + E L + + + L + L Y Sbjct: 281 LYDRLTHLTFDRYPSYRKE-----EQKELSQEIKPLRDDAKKLLEQLKGYFPYPPADMLQ 335 Query: 186 RANLYQRFIETLESATTC-PPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPC 244 L + + T+ T +R G+ + L+ L Sbjct: 336 MLQLSEPIVATMAEMTKEFLTAFQARKLAKGLLDFNDLEHFTLKIL-------------- 381 Query: 245 RYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD----SENAGQLFNSDGEQDVGNPLL 300 GD + ++ + + VG+ Sbjct: 382 ---LGDGTGSDASVYYRDKFEEVLVDEYQDINRLQEAILYWVRQVSGDHGNMFMVGDVKQ 438 Query: 301 ASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV------- 353 + + D + + + + + + ++L+ N + Sbjct: 439 SIYSFRLADPTLFIEKYLAFEHQNGGRRIV-LAENFRSRREVLDFTNLVFQQLMDEQVGQ 497 Query: 354 ---------------NIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 E + + S T + + E+ V ++ +++ Sbjct: 498 IPYDDAAALVPGFPSFHESDAFIPELLIYEKEAESTTNLIEDKTEGELHVTAIKIQELIQ 557 Query: 399 -----------EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQS 447 E+ +T +DI+++ + + +P ++D + Sbjct: 558 SQFMIYDKKRREERPVTYQDIVLLTPTRKNNLVIL-----DVFKKFGIPLEVNDAQNYFQ 612 Query: 448 HPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGID 507 ++ I+LL + D+ + ++A+L P++ Sbjct: 613 ATEIQTMIALLQIIDNPYQDIPLVAVLRSPMVGLT------------------------- 647 Query: 508 DDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPY-DESSGLIAELVGHLAS 566 + + +++VL Y D G ++ L + Sbjct: 648 --------------------EDELAEIRLADRTSEFYKAVLTYQDNQKGTVSALSKRVDD 687 Query: 567 LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGA 626 L +LN WR + + ++ + + Sbjct: 688 FLSELNRWREAARRLPIPNLLWDIYDTTAYLDYVVGLPAGQQRYANLIALIHRAEKYEKS 747 Query: 627 QYGDAVPLSLLRDELAQRLDQERISQRFLA-GPVNICTLMPMRSIPFKVVCLLGMN---- 681 + +++ ++ A V + T+ + + F VV LL Sbjct: 748 SFRGLYQFIRFIEKMQEKDKDLAEPLATPAENAVRVMTVHASKGLEFPVVFLLDTTKFFN 807 Query: 682 ------------------DGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISA 723 + + + + ++ AL A Sbjct: 808 YQDFQKRYIFEEQLGAGIQYIDASENIKYETIPFQAIKQVRLKKALSEEMRKLYVALTRA 867 Query: 724 QQKLYISYIGRSIQ-----DNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKA 778 +QKLY+ + Q + S V L + + + Sbjct: 868 EQKLYLVGSYKDRQAAFKAWQAGLTQSQTV--LDPALRLVARGSLMDWVGLTLIRHPEME 925 Query: 779 HLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQ 838 + + + + + ++ + Q V P P T L L Sbjct: 926 QVFTDASERKMTIHHPARFQIHWWNQDQIDQQLQVQPPTEAVVAPTPSTTAPERLLNRLD 985 Query: 839 RFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLF 898 + P Q + D + + L + +Q+L + E Sbjct: 986 YQY--PYSKATQTTSYQSVSELKRLYNDPDDQDITLLEWHSADQKLAPQRFRYVETELAK 1043 Query: 899 RRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQ 958 RF + G L +++ + + ++ + Sbjct: 1044 PRFLQEQKPQASSIGS---------ATHLVMQMLPLTEVPTEAS---------LAAFIDE 1085 Query: 959 VQPDGLLRWRPSLLSVAQGMQLWLEH------LVYCASGGNGESRLFLRKDGEWRFPPLA 1012 + L + + Q +W L+ A+ E + K+ F Sbjct: 1086 LVERQLFTKDVAD-KIDQASIVWFYQTAVGQTLIKYATQVKREQPFSMLKEAATIFEGFD 1144 Query: 1013 AEQALHYLSQLIEGY 1027 A + +I+GY Sbjct: 1145 EPDAELLIHGIIDGY 1159 >UniRef50_B2IGN3 Double-strand break repair protein AddB n=2 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IGN3_BEII9 Length = 1076 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 119/954 (12%), Positives = 230/954 (24%), Gaps = 130/954 (13%) Query: 146 LAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPP 205 LA E G ++ W L A+V ++ A Sbjct: 119 LAASEIGRRMQLTELILKWAEALNHAIVRIGPDGTIESDTTERF--SVARSVTDAWHLSG 176 Query: 206 GLPSRVFICGISALPPVYLQ--ALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTR 263 L + I + L L + I + F N W +I R Sbjct: 177 QLAQLIDELIIEDITWSQLDPLVLPEFDAYWRITMNFLNIAIESWPEICSEQGWIDAAKR 236 Query: 264 QRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGK--LGRDYIYLLSDLESSQ 321 + + +E S G + LLAS + G +L L+ Sbjct: 237 RVLLLAREARKLDEGTAEGPVIALGSPGFNRTTSALLASIARAPQGA---VILPGLDQDL 293 Query: 322 ELDAFVDVTPDNL-------------LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLD 368 + AF + ++ L + D++ L + + S+ RP D Sbjct: 294 DEAAFKMIDHESFGHPQAVYVRLLPILGVTRQDVMPLGEMSPMLIR-RHGFLSEALRPAD 352 Query: 369 PLDS------------------SITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIV 410 D IT ++E L L +LE + Sbjct: 353 TTDEWITYQVRNVSTDLADALSGITMIEAQDERQEALALAIALREILETPGKTA----AL 408 Query: 411 MVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDV 470 + D + + + + S + P L+ S ++D+ Sbjct: 409 VTPDRE-----LARRVRTELLRWNIEIDDSGGDPLNTSPRGLLARLALACITSGMDAKDL 463 Query: 471 LALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTR 530 ALL ++ + + ++ L + +R + ++ T Sbjct: 464 AALLANEQVSLG--LGRDRIKALAPQFEIAILRSAPVMRFFDQPDIALTMARD--AAFDT 519 Query: 531 MLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPV 590 +W + E L +L L R R + V Sbjct: 520 YAHPAKARIEAEDWDGLAQILE----------RLRDVLSPLRALRGTWPLARWIAAHRMV 569 Query: 591 CRDMLNAFFLPDAETEAAMT----LIEQQWQAIIAEGLGAQYGDA-VPLSLLRDELAQRL 645 ++ D + + T +A+ E G ++ Sbjct: 570 LDGLVRDADQTDGQDQQDRTLEAGEDAAALEALFDELSGTTPQGLLFDVASYAAFFTDIS 629 Query: 646 DQERIS-QRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 + R+ R + I L+ R + V+ L G+++ ++P F + G Sbjct: 630 GEVRLRGPRRAHPRLKILGLIEARLMQADVMLLGGLDETIWPPAAQMDAFLNRPMRAALG 689 Query: 705 D--RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 RR + A + + +S + + S L+Q + G Sbjct: 690 LTPPERRLGQATHDFTQAMGA-ESVILSRAKKRG--GTPTVASRLIQRMAALAGD----- 741 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQ 822 + + + E + Sbjct: 742 -------------------VWQSCLEQGERFLAFAEALDRTPINPADHRPQRPLGRPNPK 782 Query: 823 PLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 P P + + ++ P F + L + D Sbjct: 783 PPVGLRPTHLSVTQIETLRRDPYAIFAEKILGLKALDALGAGADR-------RDDGMAVH 835 Query: 883 QLLNAL--------VEQDDAERLFRRFRA--AGDLPYGAFGEIFWETQCQEMQQLADRVI 932 +L + D E+L R A L F W + + Sbjct: 836 AVLERCGKLHPTGPLPADMDEQLLSWLREALAARLDDPDFSAFQWPRLQKAIDVYLAFEA 895 Query: 933 ACRQPGQSMEIDL---------ACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLE 983 R +E++ + +T +++ Sbjct: 896 ERRDNLVRIEVETFGRLPIDLADGSRFLLTARADRLEFHRDQSLVLVDYKTGAPPSSKE- 954 Query: 984 HLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLV 1037 +G + L F A QA L + G G P+ Sbjct: 955 ----IRTGLAPQLTLEAAMAKRGAFGSDAIAQAYGGLYLKLGGADGGQVRPVEF 1004 >UniRef50_C5DEJ8 KLTH0C09856p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DEJ8_LACTC Length = 713 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 60/488 (12%), Positives = 130/488 (26%), Gaps = 88/488 (18%) Query: 260 LLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLG--RDYIYLLSDL 317 LL + + ++ + + + G+P + +G LG R I L + Sbjct: 218 LLHKYKVVIVDEYQDLFPSLGPFLSAISQNKQLFLFGDPHQSIYGFLGDNRSVIRFLESM 277 Query: 318 ESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIE--EFSRSDNKRPLDPLDSSIT 375 + L F +I N V+ + +K P+ S + Sbjct: 278 RPPENLKVFHLYD----NFRSTPEITRWANAVAGDVSRAVTNNNAFFSKEPMGIEPSLVD 333 Query: 376 FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYL 435 P E+E++ D++ ++ ++ DI V+ G + + Sbjct: 334 I---ADPLEELEIITDKICQLVSN--SVKLSDIAVLTRTNAQL-----KAVGDHFSSYGI 383 Query: 436 PYAISDRRA-RQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 P + S ++ + LL + + Sbjct: 384 PTEKLTAQPDWISDKNIKFLVDLLKTCM--------------------------LVSREK 417 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 ++V +G V L + + L G A ++ W + + Sbjct: 418 RFVEGAGQHQSDFSVIVTLSSLKGVSNQSIQT-----LFGEAQKANISLWNFISQSRQW- 471 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR----DMLNAFFLPDAETEAAMT 610 + S + L L +PL + R F + + E + Sbjct: 472 PTGVSNRTRIESFVRHLEPLLEYLESSQPLTAISIISRLVTVSHQIGFKPDEIKNENDLE 531 Query: 611 LIEQQWQAIIAEGLGAQYGDAVPL---SLLRDELAQRLDQ------ERISQRFLAGPVNI 661 + + ++ + + + S G V I Sbjct: 532 IFREHLIEMLGVLKLCSSTRPQNVSLTEWFLETWMDQHSSFIQHAANERSNIHDLGAVKI 591 Query: 662 CTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALI 721 T+ + + F VV L G ++ +P ++ + Sbjct: 592 STIHSSKGLEFPVVFLSGSSNSNFP------------------------IEKNALYVGMT 627 Query: 722 SAQQKLYI 729 A+ LY+ Sbjct: 628 RARNLLYM 635 >UniRef50_C1XFM8 ATP-dependent exonuclease V beta subunit, helicase and exonuclease domain-containing n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XFM8_MEIRU Length = 833 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 80/610 (13%), Positives = 155/610 (25%), Gaps = 126/610 (20%) Query: 155 VEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFIC 214 + EA+ + L L + L + E+ L R Sbjct: 254 LPRAPEAREFLRDLKDKARRAALFLPEMGSGDLFLLKHRHLLAEAFQGVRNFLQRRKRED 313 Query: 215 GISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDREL 274 G+ + + AL+AL P L R R ++ + Sbjct: 314 GVLNFADLEVHALRALDH---------------------PPVLEAYRARWRAFLVDEHQD 352 Query: 275 PLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL 334 E +LF VG+ A +G D+ +E P Sbjct: 353 TNPIQGEILERLFGEAPVAVVGDRKQAIYGFRYADHRVFTGFVEEV-------KTRPRGR 405 Query: 335 LHNIQSDILELENRAVAGVNIE-------EFSRSDNKRPLDPLDSSITFHVCHS------ 381 ++++ A + + + + + V Sbjct: 406 AVRLEANYRTQAPLLEAVDRLAEGFLGPLHQPLQPTRPAWNSPEPCLWRLVFSGSLPSKD 465 Query: 382 ----PQREVEVLHDRLLAMLEE---DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRY 434 + E + + +LE+ D L P +I ++ ++ P F A Sbjct: 466 KERLREAEARRVAQEVRTLLEKGLPDGPLRPGEIAILARTWNTLEP-----FTRALEAEG 520 Query: 435 LPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLR 494 +P + + P ++LL+ +L LL P A Sbjct: 521 IPAVSAGGGSLLETPEARDGMALLAFLADPRDDLALLTLLRSPYFAV------------- 567 Query: 495 QWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESS 554 D V +W L + + Q Sbjct: 568 -------------PDAVLHRLAEGRQAASWWEALQADGPEEPRQMLEELRQKRSLLPSFL 614 Query: 555 GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQ 614 A+L ++L L R LA E + + Sbjct: 615 LQEADLATGYTAVLAHLPGPERRLADYGAFLELVRGLEA--------------RGEGLWG 660 Query: 615 QWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKV 674 + PL L V + ++ + + ++V Sbjct: 661 VVDRLRTLARRRLELPRPPLGGL-------------------EAVQLLSVHAAKGLEWRV 701 Query: 675 VCLLGMNDG---------VYPRQLAPLGFD-----LMSQKPKRGDRSRRDDDRYLFLEAL 720 V L+G++ ++P + + D L ++ K R + +++ L AL Sbjct: 702 VFLVGLDRRPAAPSPSLLLHPERGLGIRLDKEPGGLYAELLKESLRGQVEEEARLLYVAL 761 Query: 721 ISAQQKLYIS 730 A+ L +S Sbjct: 762 TRARDLLVLS 771 >UniRef50_Q5WEU2 ATP-dependent exoDNAse beta subunit n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WEU2_BACSK Length = 863 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 71/617 (11%), Positives = 145/617 (23%), Gaps = 128/617 (20%) Query: 169 WKALVEYTHQLGQPRWHRAN-LYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQAL 227 WK + + Q R L + F+ L++ L ++ + S L L Sbjct: 295 WKPFKKQWSERNQVCSDRGLPLLKAFVTLLQAFAKRYADLKAQRLVADFSDLQQKAYTLL 354 Query: 228 QALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF 287 Q P A + ++ + + Q Sbjct: 355 QL------------------------PKVAAACQSAYTHIMVDEFQDTNQVQLQIV-QAI 389 Query: 288 NSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN 347 N VG+ + + G D + + + E++ L ++Q + Sbjct: 390 NPAHLFFVGDEKQSIYRFRGADVAIMNEMAKKAAEINEGE-------LIHLQENYRTAPQ 442 Query: 348 RAVAGVNIEEFSRSD--------------NKRPLDPLDSSITFHVCHSPQ--REVEVLHD 391 + + K P + H + E Sbjct: 443 IVELVNELFAHVMAPGGEDALPYATSYVPLKAGRKPHTNKQALAAFHQLEKSNEARSFAS 502 Query: 392 RLLAMLEED----------PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD 441 L + + D+ V++ + A A+ +PY + Sbjct: 503 LLQQTIADGMIEVEGEGKVRQAQWNDVAVLLPSRTNL-----PELEQAFAEAGIPYRVHG 557 Query: 442 RRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESG 501 + F+++L+ F V+ALL P+ T L + E Sbjct: 558 GVGFFEKQEVIDFLNVLNWLRRPFEDAYVVALLRSPLFGL----TLSDLLTVNDCKEEH- 612 Query: 502 IRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELV 561 + + L Sbjct: 613 -------------------------------------ENLAVFLAKEEAPSLFANHPRLQ 635 Query: 562 GHLASLLMQLNIWRRGLAQERPLEEWLPVCR-DMLNAFFLPDAETEAAMTLIEQQWQAII 620 L ++++ E L + L L D + +E+ Sbjct: 636 QALKQYGEWIDLFLPFAFTGSVKEGLLQLFELTGLRYAVLSDTNGIQRVGNVEKLIDLFA 695 Query: 621 AEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGM 680 + ++ + E V I T+ + + F VVCL M Sbjct: 696 QLNTTNLETLCLQMNRYIAASKNVPEAEVEQLE--GEAVTIMTVHASKGLEFPVVCLPYM 753 Query: 681 NDGVYP-----------------RQLAPLGFDLMSQKPKRGDR--SRRDDDRYLFLEALI 721 + P + + + R ++ + LF AL Sbjct: 754 DQKRRPDTDAVYFDQEWDIVFQLKLDDRDPISTPAYFQAQEKRGKQALEEAKRLFYVALT 813 Query: 722 SAQQKLYISYIGRSIQD 738 A+ ++ S + Sbjct: 814 RAKDYCLLAAADLSERR 830 >UniRef50_C5RAZ6 ATP-dependent deoxyribonuclease, subunit A n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAZ6_WEIPA Length = 1269 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 85/911 (9%), Positives = 201/911 (22%), Gaps = 212/911 (23%) Query: 228 QALGKHIEIHLLFTNPCRYYWGDIKD-PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 L + + +L N ++ I A+L R ++ + ++ Sbjct: 366 DFLTEKLRRKVLDFNDLEHFALQIVSQEKVKAELQERYTEIMVDEYQDTNQLQEAILHEI 425 Query: 287 FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELE 346 + D VG+ + + D L + + +Q + Sbjct: 426 TSGDNLFQVGDIKQSIYKFRQADPTLFAGKLA-------TYPSDTISEVITLQENFRSQP 478 Query: 347 NRAVAGVNIEEFSRSDNK----------------RPLDPLDSSITFHVCHSP-------- 382 N I + S + + L + Sbjct: 479 NVTNFINYIFAQAMSRSLGDIEYTGEAELVAGADYYPEELPKKAELLLYLDDANQDESPA 538 Query: 383 ----QREVEVLHD----------------RLLAML-----------EEDPTLTPRDIIVM 411 E + L ++ ++ ++ + DI ++ Sbjct: 539 DAEVDAEADTLASDAPYTKATGQIRLTALKIQELMQSKFEIFDRQAQKKRPVNYGDITIL 598 Query: 412 VADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVL 471 V + + +P I + +S L + D+ ++ Sbjct: 599 VPTKGQNLDVL-----DVFREMNIPIMIDGTENYFQTTEISVIMSFLQVIDNPHQDIPLV 653 Query: 472 ALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 A+L P+ ++ E L T Sbjct: 654 AVLRSPLY------------------------------DIGENGLALIRAQTPEEDFYTA 683 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 + A + + P L+ + L L ++R Q + + + Sbjct: 684 VKNLANDDEIDTIGDISPA-----LVKNTQTQVQRFLADLAVFRDLAVQNQIVTLLWAIY 738 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRL-DQERI 650 ++ + A + + + +L D Sbjct: 739 NRTGWLDYVGGLPSGAQRQANLHALYDRASAYQKSSFVGLYQFINYVTQLQSHDKDLGEA 798 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK---------- 700 V++ T+ + + F +V LL + ++ L +Q Sbjct: 799 DANVAQDSVSLMTIHHSKGLEFPIVFLLNATRTMISQRETQGSIILDAQAGGGMNYVDLQ 858 Query: 701 -------------PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS-IQDNSERFPSV 746 + ++ + + AL A+Q+L+I + + S Sbjct: 859 HHLKLITPQHEYIAQVKRQNAYAEQLRVLYVALTRAEQQLFIVGAYDNVDKLWQTWQQSA 918 Query: 747 LVQELI---------DYIGQSHYLPGDEALNCDESEARVKAHLT---------------- 781 V E + + E A ++ + Sbjct: 919 GVTEWMLPDTVRLAGKSFMDLLGMTLIRHPQAPEQFAPLRGYDVNDVMQFDEIRTKTPKN 978 Query: 782 ----------------CLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 + P + + E + + Sbjct: 979 AFAFDLEVINTQDLVNRVANYQPLSDDIVDTKDVTETSAEENTDWQSVLQFAYPYETATR 1038 Query: 826 FTLPETVPLETLQRFWAHPV----RAFFQMRL------QVNFRTEDSEIPD---TEPFIL 872 T ++V ++R + P R RL + E+ PD L Sbjct: 1039 ATAYQSV--SEIKRLFEDPDLAEGRQLLDRRLVTDDLAGLRMTDEELPEPDFMQESATRL 1096 Query: 873 EGLSRYQINQQLLNAL------VEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEM-- 924 + ++ L + L ++ + I + Sbjct: 1097 SSAAIGTATHLVMQRLDLTKGVPTEVVIRTLIQQLVNEKLIDDKIAPLISVAKIGRFFND 1156 Query: 925 ----QQLADRVIACRQPGQSMEIDL------------ACNGVQITGWLPQVQPDGLLRWR 968 +Q+ + R + + L + V + G + W Sbjct: 1157 SPLGKQMIQHADSLR---REVPFSLLLDAKRLYRAFDGDDKVLVHGIIDGYFQVDDEIWL 1213 Query: 969 PSLLSVAQGMQ 979 Q Sbjct: 1214 -FDYKTDHVSQ 1223 >UniRef50_B8DWI6 UvrD/REP helicase n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DWI6_BIFA0 Length = 1378 Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 60/499 (12%), Positives = 137/499 (27%), Gaps = 40/499 (8%) Query: 232 KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG 291 + + Y + P+ A + ++ + S LF+ D Sbjct: 295 RRRHMAEYSDFVIAAYQLVERFPSIGAHYRRQFTHVLLDEFQDTSTTQSALLAALFHVDE 354 Query: 292 ---------EQDVGNPLLASWGKLGRD------YIYLLSDLESSQELDAFVDVTPDNLLH 336 VG+P + + G +I +++ L ++ Sbjct: 355 PHGTDRSAAVSAVGDPFQSIYAWRGASPGAFRMFINDFHMPAAAEPLPMTRTRRNSRVVL 414 Query: 337 NIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITF-------HVCHSPQREVEVL 389 +++ ++ R + + + D S+ + +EV+ + Sbjct: 415 QGANNLTKVLRRVEQRPSSANAQEVPVQPLRNVDDGSVEVDEGTLAVLGFQTRGQEVDAV 474 Query: 390 HDRLLAMLEE-DPTLTPRD--IIVMVADIDSYSPFIQAVFGSAPAD-RYLPYAISDRRAR 445 + +E+ P D + V+ S + + + D R L A Sbjct: 475 TRFVKQSVEQYGDACKPGDSPVAVLFRGKKSMALYEDQLSQVTLRDGRPLRVRAVGLSAM 534 Query: 446 QSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWG 505 P ++ ++LL + + ++ LL P A + + L +N Sbjct: 535 LDRPEVQDVLALLKVVGDHTDANALMRLLATP-RYALGALDLKRLARRAADLNTEYRFRT 593 Query: 506 IDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLA 565 + + + P R V E++GL E + Sbjct: 594 LVEAGLAPAGTPKREWGALVRQYARNAPNMVYLIDMLLRDDVEAQLEAAGLSDEGRAGVM 653 Query: 566 SLLMQLNIWRRGLAQE-----RPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAII 620 + ++ + + Q E L + D++ A L A + A++ Sbjct: 654 QAVRAMHRVQDEMYQPLAQVIHTAVEALNLDVDLMVASSLRTGGAPAPRDAVRAAIDALL 713 Query: 621 A----EGLGAQYGDAVPLSLLRDELAQR----LDQERISQRFLAGPVNICTLMPMRSIPF 672 L L + + V + T+ + + + Sbjct: 714 ETVNTYTSEIAQQQRPTLRGFLTYLDMANGSDMPEAAADLGDEPADVVLMTVHQSKGLEW 773 Query: 673 KVVCLLGMNDGVYPRQLAP 691 V ++GM G +P Sbjct: 774 DAVAIVGMQQGAFPSNKGD 792 Score = 46.9 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 72/261 (27%), Gaps = 28/261 (10%) Query: 691 PLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQD-------NSERF 743 P ++L ++ + R+ D+R L AL A+ ++Y + Sbjct: 897 PDAWNLSQKEER--GRALHADERRLMYVALTRAKHDALVTYSVGATTSRIPEDNAKESGA 954 Query: 744 PSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF-------DPQNYQP 796 PSV +EL D + L +++ A Q Sbjct: 955 PSVFWRELRDSMSCDDSFSQRVELTAFDNQTTAPARPVAATAGNTAVTYDDLESTQPRSL 1014 Query: 797 GERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETV-------PLETL----QRFWAHPV 845 ER + E + A + + V E + L R Sbjct: 1015 HERGAKRPEGVIVGKGAEQFATLLVDEPYEEPMEPIDTEQHLPWPSRLSEEMHRTLRKGA 1074 Query: 846 RAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAG 905 Q Q N E + + L +R Q+ + E A+ + + R G Sbjct: 1075 AQVVQRMSQNNPTDMPGETAEGDGRSLLERAR-QLIDNRATLIREGMTADEIEQAVRMRG 1133 Query: 906 DLPYGAFGEIFWETQCQEMQQ 926 A ++ + + Sbjct: 1134 QRVLAAKDKLTATGLQRNAEA 1154 >UniRef50_D1BAW6 DNA/RNA helicase, superfamily I n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BAW6_SANKS Length = 1124 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 94/715 (13%), Positives = 169/715 (23%), Gaps = 91/715 (12%) Query: 346 ENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTP 405 RA A + ++ D D ++ V SP E + L A Sbjct: 363 HRRAPARSLDAAAAAAEASDGTDSTDGTVETAVLPSPALEEAHVAKTLRAEHLV-RGTAW 421 Query: 406 RDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISD-RRARQSHPVLEAFISLLSLPD-S 463 + V+ A +P A+ + P + + L Sbjct: 422 SQMAVVARSGSELV-----RLRRALGGAGVPVAVVGTDVPLRDEPAVRPLLRALRASATG 476 Query: 464 RFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHT 523 E + LL P+ R LR G D V L PA Sbjct: 477 DLAPEVAVELLTSPLGGIDAVGLRRLRRALRGEELAGGGGRTSDALLVEALGDPARVVTL 536 Query: 524 WRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP 583 + A ++ E+ G A+ V A Sbjct: 537 PSDVVR------APRRVARVLEAGRTALEAPGANAQTV------------LWALWAAADV 578 Query: 584 LEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQ 643 E W + A ++ A + D + Sbjct: 579 AETWRSI-------AVNGGPGAARADRDLDAVMAVFRAAETFVERVPQATAVAFADHVES 631 Query: 644 RL--DQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQK- 700 + + V + T ++VV + G+ DG +P Sbjct: 632 QDLPADTLAKGAAASDTVQLLTPAGAAGGEWEVVVVAGVQDGTWPDLRLRDSMLGSQALV 691 Query: 701 -------------PKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVL 747 + R+ D+ F A+ A ++L ++ + + PSV Sbjct: 692 DVLSGRSQDATSTGRDARRAVLADELRAFAVAVSRASRRLVVTAVRDVDSE-----PSVF 746 Query: 748 VQELIDYIGQSHYLPGD---EALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 V + S P D L+ + ++ L + G S Sbjct: 747 VDLVSPDDDGSDTEPPDVFAAPLDLRGVVSTLRTELAAALSMDGAAGSAGSAGSAGSAGS 806 Query: 805 EWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAF----FQMRLQVNFRTE 860 A++ S L + + A P + + E Sbjct: 807 AGSEGAARTAAPASTARAASVAGLLARLAGAGVGE--ADPTSWYGSAELSTPAALRAPDE 864 Query: 861 -DSEIPDTEPFILEGLSR------------------YQINQQLLNALVEQDDAERLFRRF 901 P + R + + L AE Sbjct: 865 TVPVSPSKVEQVHRCALRWALESAGGTAGSALSQSVGNLVHDIARELPAAGHAELAAELD 924 Query: 902 RAAGDL--PYGAFGEIFWETQCQEMQQLADRVIACRQPG-QSMEIDLACNGVQITGWLPQ 958 R +L P G +++LAD ++ + G + + Sbjct: 925 RRWHELGMPDGWPATQTRRRADAMVRRLADYYTEISGEVLVEESFEVQVGRAVLRGSVDR 984 Query: 959 VQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAA 1013 ++ G R + L +G+ E + N + + FP L Sbjct: 985 LERSGEDGVRVTDLKTGRGIPSVAE------AATNAQLGAYQLAVESGAFPELGP 1033 >UniRef50_A7HPC7 Double-strand break repair protein AddB n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HPC7_PARL1 Length = 1001 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 101/998 (10%), Positives = 227/998 (22%), Gaps = 137/998 (13%) Query: 68 FIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQL 127 F+ + +L + F ++ LLP R L +L + L Sbjct: 17 FLERLAATLLDDPSLGGRFKGSPELAEITILLP--TRRSVRALGEAFLRAGAGAPLLLPS 74 Query: 128 SSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRA 187 D+ ++ L+ P L + E L + + Q L + +VE A Sbjct: 75 IRTLGDVDEEDLILDPRGLGR-EALELPPAMPALER-QLRLARMIVEGQGGDETRALALA 132 Query: 188 NLYQRFIETLESATTCPPGLPS----------RVFICGISALPPVYLQALQAL--GKHIE 235 F++ + + L ++ I + L + + L L + E Sbjct: 133 ADLGHFLDMVLTEGADLTRLADLVPQDFADHWQITIDFLKVLTARWPEELARLGHMEQAE 192 Query: 236 IHLLFTNPCRYYW------GDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNS 289 L W G + + + Sbjct: 193 RRNLLLRAQAEAWTAAPPPGPVIAAGSTGSIPATAALLGVVAHLPMGAVVLPALDLDLDE 252 Query: 290 DGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRA 349 + +G P AS + G LL+ L +++ + + +L R Sbjct: 253 ESWNIIGKPGTASHPQYG--MKKLLAHLRATRADVGIWPGAERSAALRSRGRLLSEALRP 310 Query: 350 VAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 + + S + E + + +LE Sbjct: 311 AETTERWLGRLGALDGDVKDGLKGLALIEAPSERDEAGAVALLMRDVLERPGKTA----A 366 Query: 410 VMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSED 469 ++ D + + S + + ++ Sbjct: 367 LVTPDRK-----LARRVAMELRRWKIDVNDSGGEPLAKTAPVAFLRLVANMVTEDLAPVP 421 Query: 470 VLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLT 529 +LA L P+ E R + Sbjct: 422 LLACLKHPL-------------------------------AAAGEEPAKFRARVRRLEMH 450 Query: 530 RMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLP 589 + G + ++ G E+ L + + ++ + Sbjct: 451 LLRGPRPAPGLDGLRAACRALEDKPGDSGEISILLDKIERSIAPLLNAATKKGTATSIVE 510 Query: 590 VCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP----LSLLRDELAQRL 645 + ET A + +A L Sbjct: 511 AHVEAAERLAASATETGAERLWKGEAGEAAADFIRELMEATPAFGDIDPRFYPHFFDVLL 570 Query: 646 DQERISQRFLAG-PVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRG 704 + R+ + I + R + L G+N+G +P + + + G Sbjct: 571 SGRVLRPRWGRHSRLFIWGPLEARLQHADRMILGGLNEGTWPAEANIDPWLNRPMRATMG 630 Query: 705 DRSRRDDDRYLFLEALISA----QQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHY 760 +R + L A A + +++ + + + S L + Sbjct: 631 LEPP---ERRIGLAAHDFAEGASAGEAFLTRALK--VEGAPTVASRWWLRLASLLQGLEQ 685 Query: 761 LPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEF 820 A PQ +Q L ++ Sbjct: 686 EEAVSA------------------------PQWWQW-------AHKLDEPAKVLTPLRPR 714 Query: 821 VQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQI 880 P P+ + ++ P + + L + + R I Sbjct: 715 PVPPLEARPQRFSVTEIETLIRDPYAIYARKILGLKVLDPLDAD-------IAAAERGTI 767 Query: 881 NQQLLNALVEQDDAERLFRRFRAAGDLPYGAF---------GEIFWETQCQEMQQLADRV 931 + L VE + + ++ AF +W + + + D Sbjct: 768 IHEALEKFVEAYPRDLPENALQELINVGEEAFRQAIGRPGVAAFWWPRFLRIAKWIVDYE 827 Query: 932 IACRQPGQSMEIDLACN--------GVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLE 983 R + + + V ++G ++ ++ Sbjct: 828 QEERAGLRHIHAETRGEILIAELAQPVVLSGKADRIDEREDGMVNIVDYKTGTVPS--IK 885 Query: 984 HLVYCASGGNGESRLFLRKDGEWRF--PPLAAEQALHY 1019 + + + + G P+ +A Sbjct: 886 QVEIGLTPQLPLEAAMMARGGFRTKDGAPIPPAKAASL 923 >UniRef50_B0S125 DNA helicase II n=2 Tax=Finegoldia magna RepID=B0S125_FINM2 Length = 613 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 48/507 (9%), Positives = 140/507 (27%), Gaps = 97/507 (19%) Query: 253 DPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYI 311 D L ++ + + ++ + E ++ + V + + + G D Sbjct: 193 DEYILKRIKRKYKFFQVDEGQDTSKIQFELIKKIAYPENNLFIVADDDQSIYSFRGADPS 252 Query: 312 YLLSDLESSQELDAFVDVTPDNLLHNIQSDIL---ELENRAVAGVNIEEFSRSDNKRPLD 368 YLL F + + ++ I + ++ N + + + + + Sbjct: 253 YLLD----------FNKIFSNASIYYIDQNFRCSDKIVNASNLFIKQNKNRYNKDVTSTK 302 Query: 369 PLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGS 428 + I + L+ L + D ++ Sbjct: 303 ASNKKIIIKFPQNFLS----LYSYLKNNINPDKKT-----AILYRKN-----ISSIALTK 348 Query: 429 APADRYLPYAI-SDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITE 487 D+ + + + +H VL + +++ +++ + I + Sbjct: 349 YLHDQDIDFHSRYQKDDFYNHFVLNDILKMIAFSENKTSVGLFRDI----YYKLNSYIKK 404 Query: 488 EGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSV 547 + L + + + + Sbjct: 405 TSINQLETY-----------------------------------------DESMPVLDRL 423 Query: 548 LPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEA 607 L S + L S + + ++N ++ Sbjct: 424 LDDSTLSRYYVDRFMDLKSFFSGIKRAKGS-----------KKIDIIMNDIDYKTYIEDS 472 Query: 608 AMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPM 667 + ++ + E + D +E+ ++ S + + +N+ T+ Sbjct: 473 VLLQNQKISLDHLVEIYKYLFKDCECYEDFINEIESLKKIQKESIKHTSN-LNLLTVHSA 531 Query: 668 RSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + + F V ++ + DG +P + K+ + +++R +F A+ A+ KL Sbjct: 532 KGLEFDEVFIIDLIDGEFPTNIDSN---------KKNYENIFEEERRMFYVAMTRAKDKL 582 Query: 728 YISYIGRSIQDNSERFPSVLVQELIDY 754 + E S ++++I+ Sbjct: 583 TLLSPKTRNS--VEVDSSQFLKDIIEI 607 >UniRef50_Q6MIL6 Probable exonuclease RexA n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MIL6_BDEBA Length = 1007 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 77/806 (9%), Positives = 189/806 (23%), Gaps = 150/806 (18%) Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDY 310 + P K ++ + E L VG+P + + G Sbjct: 305 LDQPEAAVKFSQEWDFWMVDEYQDTSPVQVELLRHLVGEKPVFIVGDPQQSIYLFRGA-- 362 Query: 311 IYLLSDLESSQELDAFVDVTPDNLLH-NIQSDILELENRAVAGVNIEEFSRSDNKRPLDP 369 E E++A L++ ++LE N + + + + +++ Sbjct: 363 -RSEVFREKVAEIEAQQGDVQVKLVNYRSSPEVLEFFNHYFTRLGSQFAAMTPDEKKPKK 421 Query: 370 LDS----SITFHVCHSPQR---EVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFI 422 + E+ R+ +L+ +P I V+ + Sbjct: 422 GPEVPVVQVVLSETGDEDETSAEILATVARIQELLQA--GTSPEQICVLGRTHRTLEDI- 478 Query: 423 QAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAAR 482 + +P + + +++L + + + +ALL P LA Sbjct: 479 ----AKVAQEYGVPLQLHSGSGFYERREVLDALAVLKFLVNPHDNANFVALLRSPWLA-- 532 Query: 483 FDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQG 542 + L + +H++ + L Sbjct: 533 -------------------------LPDSEILSYCHSFRHSFWKEAQKNLDQKPEIHPLR 567 Query: 543 EWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPD 602 +++L E GL L L L L + Sbjct: 568 VMKALLAQAEVKGLSWTLKKALIDL--------------------------GLFDYSARI 601 Query: 603 AETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDEL--AQRLDQERISQRFLAGPVN 660 T + + + E + L + L + + + VN Sbjct: 602 DSTGRREANLWKVVSLLSQEERRPGFNYLDFLDSSLETLSTDEGGEDADATPVIEPKRVN 661 Query: 661 ICTLMPMRSIPFKVVCLLGMNDG----VYP--RQLAPLGFDLMSQKPKRG---------- 704 T+ + + F V L GM + P G + + + Sbjct: 662 FMTVHASKGLQFDQVILPGMGNDPRASHAPVLSIHEKTGLWSLKVRNEETQAMAGSVLAD 721 Query: 705 ------DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQS 758 + ++ + AL A+ + + + + + + + Sbjct: 722 QIVEELRKRETEEFNRVLYVALTRAKSGVTLLWDKKVGKK-------SWAAHCPLNLEEG 774 Query: 759 HYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHS 818 + D + + + A K Sbjct: 775 LHEEKDFSYVVRSENPQPVK----------------------------MSEQDLAEKDLR 806 Query: 819 EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRY 878 Q + + + L V + L + Sbjct: 807 PQWQAEASEKRKYISVTELVTPE------------GVQAGGGYTPKASQLGAGLARAQQG 854 Query: 879 QINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPG 938 +L A ++ + L + P + + + + + Sbjct: 855 TNAHRLFEA-LKFTSFDELLKISDEDLKKPLEFLAKTPELPLLRIIN---EGFVEWGFAL 910 Query: 939 QSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRL 998 + E L + + G + ++ ++ + LE + + Sbjct: 911 KYKE-ALMQGQIDLWGVVDG--TLWMVDYKTGSQRYSDTAFRQLEAYTWALYRMKYLDNV 967 Query: 999 -FLRKDGEWRFPPLAAEQALHYLSQL 1023 ++ + + +AL L +L Sbjct: 968 QQVKLAVVYPVDEVVKIEALGSLKEL 993 >UniRef50_C1ZCN1 ATP-dependent nuclease, subunit B n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCN1_PLALI Length = 1113 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 111/958 (11%), Positives = 248/958 (25%), Gaps = 166/958 (17%) Query: 238 LLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGN 297 L Y + + + + + D + Sbjct: 158 LALAAIYHEYQALLNARGWYDQEGRSWLARAAVSQGARAPFDQVRLVVCDGFVDFTWIQY 217 Query: 298 PLLASWGKLGRDYIYLLSDLESSQELDAFVDVT----PDNLLHNIQSDILELENRAVAGV 353 LL + + D + L D +SQ +F P L ++S I L+ V + Sbjct: 218 ELLEQFARWNADIVITLPDEFASQRNTSFDRSELFAIPRRTLEILKSRIKPLQEIRVHSI 277 Query: 354 NIEEFSRSDNK---RPLDPLDSSITFHV------------CHSPQREVEVLHDRLLAMLE 398 + + + L + P RE+E + ++ Sbjct: 278 STNPDHGAVPTGIEQLARNLFGNPRIVSRCSTAAGFDAIAAGGPHRELEAVSHQIKKW-- 335 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 +I+V+V + S + F A +P + +S PV+ L+ Sbjct: 336 RSSGFLAEEIVVVVRGLASEASRWLDHFELA----GIPAYAPQASSLESCPVVRWMAQLV 391 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 L + + S D+ ++ + P+ Sbjct: 392 KLELNDWTSHDLRLVVSSTFFRP--------------------------------AQFPS 419 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + L + + + + ++ L L L Sbjct: 420 KAKRALLAWLAKSPASSRKILSLKARERAADPSALTTEKEINHTLVSQGLETLLRVTEKL 479 Query: 579 AQERPLEEWLPVCRDMLNAF--FLPDAETEAAMTLIEQQWQAIIAEGLGAQY-----GDA 631 + E W+ + +++ + FLPD+ + A + Q I+ + + Sbjct: 480 STSHSFEGWIDLWAAIISQWTPFLPDSSNDRADRADWELLQRILRRVSRCRGTWQEPSER 539 Query: 632 VPLSLLRDELAQRLD-QERISQRFLAGPVNICTLMPMRSIP-FKVVCLLGMNDGVYPRQL 689 + L E+ L + + G +++ R + + V ++G + YP Sbjct: 540 LSLQAWWSEVEACLSVERSLPPAPSPGMISLIDPAQARFLDSARCVVIVGATEQAYPAAD 599 Query: 690 APLGFDLMSQKPKRG--------DRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 +++ + ++ LF + + A + L I+Y + + E Sbjct: 600 HTNCLYSHAERQSLIAAGLRLVREEDHSSEETLLFWQLVSMATENLLITYPAINAK-GQE 658 Query: 742 RFPSVLVQELIDYIGQSHYLPGDEA-----LNCDESEARVKAHLTCLHTRMPFDPQNYQP 796 FPS V D + LP +E R + M ++ Sbjct: 659 LFPSPFVLAACDLFTKDVQLPRHVGSIHVMPEREEIHTRRDLRIVAFEQAMTGHAGWWKT 718 Query: 797 GERQSYAREWLPAASQ--------------------AGKAHSEFVQPLPFTLPETVPLET 836 G + + ++ + + + Sbjct: 719 GLLDTTEGQAYRNMARGLPMLQARYRTEGFTEYEGMLNEPALREEFARQYGPEHQFSVTR 778 Query: 837 LQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAER 896 L+ + P R + + L + R L R L +L+ Sbjct: 779 LELYANCPFRFWIEEVLGLAPRETKQ-------LSTNYLMRGTALHSALASLLGSGRLAL 831 Query: 897 LFR---------------RFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQ----- 936 + RA G A + + +Q A + Sbjct: 832 ADEAELSRIFAEHVAVEMQRRAKGSPLAEAMARLDSQIVSAWSEQFAASQREYLETMVSA 891 Query: 937 ---------------------------PGQSMEIDLACNGVQITGWLPQVQPDG----LL 965 P ++EI + V++ G + ++ Sbjct: 892 WGGMPETTLPEVAFGQVYDDHGELIHGPYPALEISRGGHLVRLGGKIDRIDAHKLPTGEQ 951 Query: 966 RWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIE 1025 + ++ + G S + + +A + A + + Sbjct: 952 FFSIIDYKSG----GASQYRFDEKAVQQGLSLQLVVYLLAVKRLRMAGDDAEAWQAGFWG 1007 Query: 1026 GYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRG 1083 +EG+ A L ++G + ++ +++ Q + G MV G Sbjct: 1008 LRKEGLVAGL----KAGRKSKEWNRLDEDSVHRLEEAVQQSVIDLAISIRNGEFMVDG 1061 >UniRef50_C9LQY5 ATP-dependent nuclease subunit A n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQY5_9FIRM Length = 1285 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 74/633 (11%), Positives = 154/633 (24%), Gaps = 126/633 (19%) Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTC-PPGLPSRVFICGISALPPVYLQALQ 228 + L+ + + H + L T R G+ + L Sbjct: 324 EKLIPFFAISEEQWLHDVIRMHPIVRALSDVTIAFSRAYADRKKKEGLMEFTDMEHYVLD 383 Query: 229 ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFN 288 L ++ P R L K + + ++ + A L N Sbjct: 384 IL---VDKTAEGFTPERAGEFPSSAARELQK---KYKEIMIDEYQDTNDVQELIATLLSN 437 Query: 289 SDGEQDVGNPLLASWGKLGRDYIYLLSDL--------ESSQELDAFVDVTPDNLLHNIQS 340 VG+ + + D + +D + D + + Sbjct: 438 GRNRFMVGDVKQSIYRFRQADPTIFQKKYRSFSSDENAEDRRIDLNRNFRSDAAILASIN 497 Query: 341 DI---------LELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQR------- 384 I LEL+ + S + F + + Sbjct: 498 YIFRQLMSEKLLELDYGDREALYPGRHEDSRPA-AYAGGAVEVEFIDKVTDENTVPMDES 556 Query: 385 ---------EVEVLHDRLLAMLEEDPTL----------TPRDIIVMVADIDSYSPFIQAV 425 E ++ ++ A++EE + DI +++ ID +P + V Sbjct: 557 VNDITSITFEGRLIAKKIRALMEEKRQVMNKDGTFRSTDYSDIAILLRSIDKKAPALLKV 616 Query: 426 FGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDI 485 + ++P ++ SLL + D+ +LA+L + Sbjct: 617 ----LNEEHIPATADKDDDFIRSMEVQILWSLLKILDNPRQDLPLLAVLRSFL------- 665 Query: 486 TEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQ 545 G+D+++ L L W Sbjct: 666 ------------------AGLDEEDFARLRLA------------------LAPEEDSLWD 689 Query: 546 SVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAET 605 + L L+ L+ WR+ ++ + D ++ Sbjct: 690 ILPRAKGIIPEEKAL--RLSRFLLLYETWRKEARKDGVAPLLRRIIEDTDYLSWVAGLPN 747 Query: 606 EAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLM 665 A + + A + D + IS V I ++ Sbjct: 748 GTAGKSHVLSFYELAKTRDSATVNGLFSFLEYLR--RAQKDFKTISTSAKGNAVQIMSIH 805 Query: 666 PMRSIPFKVVCLLGMNDGVY-----------------------PRQLAPLGFDLMSQKPK 702 + + F VV L M+ + Sbjct: 806 KSKGLEFPVVFLADAAKSFNVKDLDRTVIFHREMGLGIHYFDKEHMAHWPSLYWMAIRTA 865 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRS 735 G R + ++ L A+ A+ L I+ ++ Sbjct: 866 AG-REAQAEEARLLYVAMTRARDLLCITAFRKN 897 >UniRef50_C0GSZ1 Putative uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GSZ1_9DELT Length = 904 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 117/859 (13%), Positives = 227/859 (26%), Gaps = 159/859 (18%) Query: 247 YWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKL 306 W DI + ++ L + + + N + + W Sbjct: 89 LWEDIIRQSPHSRGLLHLEETARQAARAWTLFEQWNLQDQQDPALWSSPDHRAFLEWSTA 148 Query: 307 GRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILE-LENRAVAGVNIEEFSR----S 361 RDY +E ++ + L +L LEN + +I + Sbjct: 149 FRDYTQGRGWMEEARHTRHVARMFEKGCLPCPAHLVLAGLENLSPVQEHILDVLDGLGCK 208 Query: 362 DNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPF 421 N D +IT ++E+ + LE D I V+V D+ S Sbjct: 209 INHLEPARNDPAITLMPLADREQEMRTCALWVRTKLESDHEQR---IGVVVPDLYSVRQE 265 Query: 422 IQAVFGSAPAD---------RYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 I F + Y +S R +P++ + + LL L E V A Sbjct: 266 IIHTFDAVLHPDTAFEPLPPEKRAYDLSLGRPLSGYPLIRSALHLLDLRLDPLPLETVSA 325 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 +L+ P L A + R GL +L Sbjct: 326 VLNSPFLKG------------------------------------AKSETPARSGLETLL 349 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 + D S LA L + L +P W Sbjct: 350 RKTREPQISFSFLLDKAADSSKSWS---CLVLARSLKAFQARIKELPSTQPPSAWAQDLD 406 Query: 593 DMLNAFFLPDAE--TEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERI 650 +L P + ++ + + + +S L++ L++ Sbjct: 407 LLLQDLGWPGDITLSSHEYQTVQAFNACLKRLAGLDRVMPSTGMSQATQTLSRILNETIF 466 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDR---- 706 V I ++ S F + ++G+ D +P+ P F +S + Sbjct: 467 QPEPPEVRVRIMGMLEAESESFDELWIMGLTDQAWPQSPEPSPFLPVSLQKHLDMPRSSP 526 Query: 707 -SRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDE 765 D R + L + + +SY R +++ E PS L++E+ L Sbjct: 527 QHELDYARRIMHRLLQNTSRA-ILSYPCR--EEDLELLPSPLLREISGLEFNEPGL---- 579 Query: 766 ALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLP 825 L P + A A+ G Sbjct: 580 --------------LPDPDPWAGLSPGEQLKYFQNEQAPPLSQASRAPGGT--------- 616 Query: 826 FTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLL 885 L+ P +AF + R+ E L R I L Sbjct: 617 ---------GVLRSQALCPFQAFARHRMHARSLEEP-------VVGLGPPERGIIMHAAL 660 Query: 886 NALVE-----------------QDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLA 928 + Q + + + R F E + + +Q L Sbjct: 661 EYFWQSCRDQAALLNLTGDRRLQMIDQAVDQAIREMHSQRPQTMTSRFQELERERLQDLL 720 Query: 929 DRVIACRQPGQSMEID-------LACNGVQITGWLPQVQPDGLLRWRPSLLSVAQG---- 977 +A + Q ++ ++ NG+++ ++ R + Sbjct: 721 QEWLALEEQRQPFQVQELEKRSNISINGLELNVVADRMDRLEDGRLVVIDYKSGRHAMSE 780 Query: 978 ----MQLWLEHLVYCASGGNGESRLFLR--KDGEWRFPPLAAEQAL-------------- 1017 + + +Y + ++ + GE F L E + Sbjct: 781 WFKKRPVEPQVPLYTLFCPEHVAGVYFGVVRKGECAFVGLGQEDGIVPGCKGFASHKLTS 840 Query: 1018 --HYLSQLIEGYREGMSAP 1034 + +L++ +++ + Sbjct: 841 HYQHWDELLQDWKKSLEKL 859 >UniRef50_D1R7X5 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7X5_9CHLA Length = 1167 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 109/1031 (10%), Positives = 253/1031 (24%), Gaps = 177/1031 (17%) Query: 71 DMFVRVLPEIPKESAFNKQSMSWKLMTLLPQ--------LLEREDFTLLRHYLTDDSDKR 122 + + +P P S + ++ M LL L + L LTD + Sbjct: 202 KVMTQGIPLAPSPSFEEQYALFKNAMLLLKDRGFSSHSILTDFHTLIPLYKGLTDRQKRI 261 Query: 123 KLFQLSS-KA-ADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLG 180 K LS + A LFDQ +W ++ Q L KAL Sbjct: 262 KAETLSKVQLFASLFDQ-----EEW--------SLQDYESVIEDQLFLVKALDPSALTQK 308 Query: 181 QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF 240 L + +L P P + + L + L+ + E Sbjct: 309 ALSAPPPILILPNMLSLLKRHLEPLVNP----LSTFAKLAYDCQKFLKHYQQQEEKFRFD 364 Query: 241 TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDG----EQDVG 296 ++DP + + + R ++ + + LF + VG Sbjct: 365 DLLHNMLQA-LQDPTFTENIRNQYRAALIDEFQDTDPIQWKIFESLFLHEAYSGYLYLVG 423 Query: 297 NPLLASWGKLGRDYIYLL---SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGV 353 +P + + D L + + + L ++L + A + Sbjct: 424 DPKQSIYAFRQADIYTYLSAAQAIGEDYRVSLTTNYRSHPSLVQGL-NVLFAQENAPDFI 482 Query: 354 NIEEFSRSDNKRPLDPLD-----------SSITFHVCH------SPQREVE---VLHDRL 393 ++ ++ ++ N + + D SI F + E + + Sbjct: 483 HLPKWQKTLNYQHVQAADKTFGKTLTDEMGSIHFILSDQEKPSLDSLEEKVYFPFIAQEI 542 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 + ++ T +D V+VAD + +P P ++ Sbjct: 543 QKLCHQN-TFEYQDFAVLVADR-----YQAQRMSDYFKTLNIPSLTQRNANLADSPAVQC 596 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 + +L S + + G +G + +++ Sbjct: 597 WQEILHGILHARQSSAL-------------------------KIALGGKIFGWNHEDILR 631 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 LE P + T + + E + +++ L + Sbjct: 632 LEDPFFYEKTLAE-IYFLRKKLLSEGFIAFYDALMH---------------HQLFQDSHT 675 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 + + ++L + ET + + Sbjct: 676 LIEKILHQESGADFLDELCQIAELLIQKQNETHCPPEGLIAFLDEF----------PILK 725 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMN-DGVYPRQLAPL 692 L+ ++ V I +L + + F++V +LG+ P L P Sbjct: 726 LND--------DERLYKQVDTHRKAVQILSLHSSKGLEFEIVFVLGLTKKNQAPSPLIPQ 777 Query: 693 G-----------FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSE 741 +DL + + A A+ +LY++ + + + Sbjct: 778 SQEGSQSILQMVYDLQDPAYIDYCQELDAEKMRQLYVAFTRAKYRLYVAALSPYEKQTAY 837 Query: 742 RFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQS 801 S ++ + +GQ + + Sbjct: 838 GCASP-IELFLAKLGQPSCTYAQLYERIHANSTESLISFI-DALDNSISITYTIESQVTP 895 Query: 802 YAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 E S + + Q PV + Sbjct: 896 PCYEMNTTPSPILLPPPTIHISGEMLAISSFSQISKQMDQITPVWT-------ESPPHHF 948 Query: 862 SEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPY------GAFGEI 915 + G + ++L + + + PY + ++ Sbjct: 949 DASTKNLHTLPAGNITGLLLHEILEKFPFEKANDMQNPSEMRSWITPYVQNTEFQDWDQV 1008 Query: 916 FWETQCQEM--------QQLADRVIACRQPGQSMEI---------DLACNGVQITGWLPQ 958 E + A + + + + +E DL + G + Sbjct: 1009 LAEMLFNTLKTPLPFKDATFALQDVQETKIFKEVEFLYPCEKGLLDLHIPEGFLKGVIDL 1068 Query: 959 VQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALH 1018 + + L+ + + + + + + Sbjct: 1069 MFEHAGKFYMI-DWKSNWLGPN-LQAYSTTSLQQSMHQHHYHLQSAIY----------VE 1116 Query: 1019 YLSQLIEGYRE 1029 L + ++ + + Sbjct: 1117 SLKRYLKLFNQ 1127 >UniRef50_B5CRL8 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CRL8_9FIRM Length = 723 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 62/526 (11%), Positives = 147/526 (27%), Gaps = 102/526 (19%) Query: 216 ISALPPVYLQALQA--LGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRE 273 IS + Y + L+A L + + + R P L ++ + Sbjct: 180 ISVIYKEYCRQLRAKGLMDYDDQMVYAYTMLRSV------PELLRHFQELYPYICVDEAQ 233 Query: 274 LPLFRDSENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPD 332 L + VG+ + +G LL F PD Sbjct: 234 DTSKIQHAIIALLASGSENLFMVGDEDQSIYGFRAAYPEALL----------TFEKNYPD 283 Query: 333 NLLHNIQSDILELENRAVAGVNIEE---FSRSDNKRPLDPLDSSITFHVCHSPQREVEVL 389 + ++ + + + + + S I S + + L Sbjct: 284 AKVLLMEENFRSDARIVLGADRFIQKNTLRHEKHMKAARKPVSDIREISLRSRKAQYTYL 343 Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRR-ARQSH 448 L E T ++ D + P + +PY + + + SH Sbjct: 344 AK-----LAEGCT---SQTAILYRDNECILPLV-----DLLERNGIPYQMRNAELSFFSH 390 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 + I+++ L + +E L + R Sbjct: 391 RTILDIINIIKLAQNPMDTEAFLQIYYKIGTYLRKQD----------------------- 427 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 A+ A+ + +P + + +L GH+ + Sbjct: 428 ---------------------------AIRIARISEEKRIPVLDVAAEDPDLNGHVLGSV 460 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 + + L Q+ + + M +L + + I + + Sbjct: 461 RSMRTHLQNLLQDSGERAIYRIMQFMGYQEYLNRSGMSDSKLEILRILGSRADS------ 514 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + L+ ++L + ++ ++ + + T+ + + + V L+ + DG+ P Sbjct: 515 --PMELAERLEQLKVMIREKEPDRKCP---LILSTIHASKGLEYDSVYLIDVADGILPES 569 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR 734 + +++ K +++R LF + A+ L + R Sbjct: 570 IPQNLHQASAEELK-----AYEEERRLFYVGVTRAKDHLTLFTTNR 610 >UniRef50_Q311L1 ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q311L1_DESDG Length = 1067 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 102/867 (11%), Positives = 211/867 (24%), Gaps = 172/867 (19%) Query: 198 ESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYL 257 L FI I+ L L+ G + L G+ Sbjct: 305 REGKLMRRALQQAPFITLINLLTEQAQSMLKQEG-LVPNALWPAYARTVLSGEAGASEAF 363 Query: 258 AKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-----GEQDVGNPLLASWGKLGRD--- 309 ++ TR ++ + + L VG+ A + G D Sbjct: 364 CRMGTRLTHLLVDEFQDTSRDQWQAIMPLATECLAKGGSVTYVGDVKQAIYSWRGGDSDL 423 Query: 310 YIYLLSD------LESSQELDAFVDVTPDNLLHNIQSDILE------------------- 344 + L + S ++L + ++ + + E Sbjct: 424 FDGALEEPELRAICPSPRQLLLPFNWRSSEIVVTTNNRLFEPLGSGQSALAAARAICDDD 483 Query: 345 -----LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFH--VCHSPQREVEVLHDRLLAML 397 ++ A + + + + S + E + + L ++ Sbjct: 484 APEEVIQEAASRILRSFTGTAQQVPEHRQGSGGLVRLYDLYADSSEDLYESVKEELHRLI 543 Query: 398 EED--PTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFI 455 E+ RDI V+V + +P + HP++ + Sbjct: 544 TEELSGRRQWRDIAVLVRSNPEAGRV-----AEWLVEWDIPIITENSLRLADHPLITQTV 598 Query: 456 SLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELE 515 + L D L + + + G L+ Sbjct: 599 AFLRFLDYPLDELA-----------------------LCEVLCGCELFGGAGGLARASLD 635 Query: 516 LPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWR 575 R L+ + E+ W++ + + + L + + R Sbjct: 636 ------GQLATRGDRPLITWLRETYPDIWKTWFAPFYTQAGLMSAYDTVQELFNRFMVCR 689 Query: 576 RGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS 635 R A + + A LS Sbjct: 690 RHPADTV--------------------------------FIRRFLEIVHAADARGLRSLS 717 Query: 636 LLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLG----MNDGVYPRQLAP 691 + Q +E++ V I T+ + + F VV + + + P + Sbjct: 718 TFLEYWQQHGTEEKVPMPDNLDAVRIMTMHKSKGLEFPVVIIPFHHHTLQNDNTPVRTTV 777 Query: 692 LGFDLMSQ------KPKRGDRSRRD-DDRYLFLEALISAQQKLYISYIGRSIQDNSERFP 744 G D+M R+R + L A +L+ S +N Sbjct: 778 DGQDVMVAACAELGAQWYAARARDACEQLNLLYVAWTRPVDELHAFLGCTSRNENKAPML 837 Query: 745 SVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAR 804 S L L + ++ A T + P Sbjct: 838 SALRVMLGEDYPARGETVQWGETPHAQAAGSSPAGTTADAVQQPC--------------A 883 Query: 805 EWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEI 864 P ++ A A + LP + + +P+ Sbjct: 884 GSAPCSAPAEPAAALQNWMPMDWLPT-------LKIFRNPL------------------- 917 Query: 865 PDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGD------LPYGAFGEIFWE 918 E + + R ++ + +L D E RR + +P Sbjct: 918 ---EDVVFDERRRGELAHSCMESLKLTGDTESDIRRAVSHALEKCPFPVPDKESTAQELH 974 Query: 919 TQCQEMQQLAD--RVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQ 976 + L D R +A QP QS+ +D ++ + ++ ++ S A Sbjct: 975 GMLRWAASLPDMPRWLAHGQPEQSV-MDADGALHRVDLLVDDGHTRTVVEYKTGAQSAAH 1033 Query: 977 GMQLWLEHLVYCASGGNGESRLFLRKD 1003 Q+ + + + + D Sbjct: 1034 RQQVSRYLNLLRQISPVPAAGVIIYLD 1060 >UniRef50_Q5CVQ2 UvrD like super family I helicase involved in nucleotide excision repair, possible bacterial horizontal transfer n=2 Tax=Cryptosporidium RepID=Q5CVQ2_CRYPV Length = 917 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 58/589 (9%), Positives = 159/589 (26%), Gaps = 114/589 (19%) Query: 255 AYLAKLLTRQRRHSFEDRELPLFRDSENAGQLF---------NSDGEQ------------ 293 K+ ++ + + L + Sbjct: 319 NIREKIQDSYPYIFCDEFQDTSKLQFKILELLTKSIINKKRKFEAEKFTRDQNLRRGGIT 378 Query: 294 DVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL-LHNIQSDILELENR-AVA 351 VG+ A + G + F + DN+ L + ++ ++ V+ Sbjct: 379 VVGDDDQAIYSWRGVETG----------VFSRFSSMFKDNINLIYLSTNFRSTKSIIQVS 428 Query: 352 GVNIEEFSRSDNKRPLDPLDSSIT--FHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDII 409 +++ +K + D + + E+ + +L +L+ + + Sbjct: 429 NNLVKKNKFRISKLLISNNDFGVEPVVYYFPKQIDEMHWIASTIL-LLKMKFNYSWSEFA 487 Query: 410 VMVADIDSY---------SPFIQAVFGSAPADRYLPY--------------AISDRRARQ 446 ++ D+ F+ + + D+ +R Sbjct: 488 ILARTNDTLFYVEKLLSDKKFLISCLEMLQDTENINNERGWFKMISNDLLDFDIDQLSRY 547 Query: 447 SHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGI 506 + + S + +F S+ + + +L+ + +E + R Sbjct: 548 KSAEITFPLENTSRNNPKFASDLLYRAEILDILSYCRLMIDETADDCFLRICNRPKRGIG 607 Query: 507 DDDNVRELELPATGQHTWRF---------GLTRMLLGYAMESAQGEWQSVLPYDESS--- 554 D+ E A G R L + G S Sbjct: 608 DNAIKLIEEYGAKGISLMRKSTQPLNGICELDTSVYGNTTNVYTSIVSVCRMLVSSKFET 667 Query: 555 ------GLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC-----RDMLNAFFLPDA 603 L + + + + L L+ ++ + + + E + + D N + + Sbjct: 668 KSKINYKLHKKSINSIKAFLDFLDDLKQFIKNKVSVSEIINLIVKKMNLDNQNEIMVKQS 727 Query: 604 ETEAAMTLIE-QQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRF-------- 654 + + + + + LS + L ++ Sbjct: 728 KNKRLLQSNLVDNINSNTEDSEKINSRKLSTLSSISTLLKYSEPYTPNDEQPTGYECLLC 787 Query: 655 -------------LAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKP 701 +++ T+ + + +KVV + D V+P ++ ++ Sbjct: 788 FLQDASNGLLQIKKGEKISLSTIHRAKGLEWKVVFIPKFVDKVFPLYRESENLEIKNEFD 847 Query: 702 KRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQE 750 + +++R + A A+++L++S + PS +Q+ Sbjct: 848 EIT----IEEERRIVYVAFTRAKERLFVSVPLNVGK------PSPFIQD 886 >UniRef50_Q836J8 ATP-dependent helicase/nuclease subunit A n=35 Tax=Bacteria RepID=ADDA_ENTFA Length = 1264 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 71/867 (8%), Positives = 192/867 (22%), Gaps = 195/867 (22%) Query: 259 KLLTRQRRHSFEDRELPLFRD----SENAGQLFNSDGEQDVGNPLLASWGKLGRDY---- 310 + ++ + L VG+ + + D Sbjct: 399 YYREKFDEVLVDEYQDINQLQESILYWLRRPLSTEGNLFMVGDVKQSIYSFRLADPTLFI 458 Query: 311 --IYLLSDLESSQELDAFVDVTPD------NLLHNIQ---SDILELENRAVAGVNI---- 355 + + + + L Q + ++ A + Sbjct: 459 EKYNQYGQGKEGKRIILAENFRSRKDVLDFTNLVFSQLMDERVGQIAYDESAALVHGFDQ 518 Query: 356 ---EEFSRSDNKRPLDPLDSSITFHVCHSPQ--------REVEVLHDRLLAMLEE----- 399 ++ S+ F SP+ E+ V ++ ++++ Sbjct: 519 FSEAADYSTELLIYEKKATESVEFPELQSPELLIEDKTEGELYVTALKIRELIDQNFLIY 578 Query: 400 ------DPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 D +T +DI+++ + + +P ++D + + Sbjct: 579 DKKLKTDRPITYQDIVLLTPTKKNNLTIL-----DVFKSLEIPVQVNDAQNYFQATEIRT 633 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 I+LL L D+ + + A+L P++ + Sbjct: 634 MIALLQLIDNPYQDIPLAAVLRSPIVGLK------------------------------- 662 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAEL---VGHLASLLMQ 570 ++L +++ L +++ E Sbjct: 663 --------------ENELVLIRLANKETSYYEAFLTFNQKMEPTMEEAVVQEKTIRFAES 708 Query: 571 LNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGD 630 L WR + + + R+ ++ A + Sbjct: 709 LEKWREQARRNQISNLLWTIYRETAYLDYVGGLPVGKQRQANLYALVDRAAAYEKTTFRG 768 Query: 631 AVPLSLLRDELAQRLDQERISQR-FLAGPVNICTLMPMRSIPFKVVCLLGMNDG------ 683 +++ ++ V + T+ + + F VV +L M Sbjct: 769 LFQFVRFIEKMQEKDKDLAEPVVLSEENAVRVMTIHASKGLEFPVVFVLDMTKEFNVSDL 828 Query: 684 ----------------VYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKL 727 + P + + R ++ AL A+QKL Sbjct: 829 NERYIFEENLGVGIRYLQPEERVMYDTLPFLAIKQVRLRKLLSEEMRKLYVALTRAEQKL 888 Query: 728 YISYIGRS-------------------IQDNSERFPSVLVQELIDYIGQSHYLPGDEALN 768 ++ + +N + S L+ + + + + Sbjct: 889 FLVGSYKDQAAMWKEWLKVGDVETLVLPAENRLQSKSSLMNWVGMTLVRHQKADEYQQEV 948 Query: 769 CDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHS---------- 818 + +VK H H + + Q ++ ++ + + Sbjct: 949 VVSNVPQVKKHPANFHIQWFNEEQLRAAIQQLQLPERQAEDLAEKAQLSADKINRGLARL 1008 Query: 819 --EFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPF------ 870 + + + ++R + P + ++ R +++ Sbjct: 1009 SFNYPFEVATRTTSYQSVSEIKRVFDDPDN---KEIGKIEVREDNTIQAQPLIVNRMIEG 1065 Query: 871 ------------ILEGLSRYQINQQLLN--ALVEQDDAERLFRRFRAAGDLPYGAFGEIF 916 LL L +Q E + + Sbjct: 1066 DLSKPKFLDTVQAPSAAEIGTATHYLLQLIDLSKQPSYEEVRAVQERLVENKLILPAIAE 1125 Query: 917 WETQCQEMQQLADRV-IACRQPGQSMEIDLAC------------------NGVQITGWLP 957 Q + + Q Q++ + + + I G + Sbjct: 1126 KMNLEQIVAFFDTALGKQLIQHHQTVRREQPFSMLIEAEELIQNYPETTQDDLLIHGIID 1185 Query: 958 QVQPDGLLRWRPSLLSVAQGMQLWLEH 984 + Sbjct: 1186 GYIELDNQCILY-DYKTDHVKGTSPQA 1211 >UniRef50_C6IZE1 Recombination helicase AddA n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZE1_9BACL Length = 1341 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 71/691 (10%), Positives = 156/691 (22%), Gaps = 135/691 (19%) Query: 191 QRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGD 250 + F+ + L V G + L G+ Sbjct: 336 EAFLREMHDMAPLLGALSELVSEFGERYRLQKVSKGWLDFSDLEHYCLQILRHPDSEPGE 395 Query: 251 IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD--GEQDVGNPLLASWGKLGR 308 ++ + + ++ + + + VG+ + + Sbjct: 396 LRPSDAALEYRRQFDEVLLDEYQDTNTVQETIVRLISRENPGNRFMVGDVKQSIYRFRLA 455 Query: 309 ------------------------------------DYIYLL------------------ 314 D + LL Sbjct: 456 EPGLFLEKYRIYGDNFDGAGLRIDLARNFRSRREVVDAVNLLFRQIMNESVAEISYDTRA 515 Query: 315 -SDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSS 373 + D P+ LL + + + + G N ++ L + Sbjct: 516 ELVYGEGFPPEGAEDYRPELLLIDRDNGSSGGSDSSERGDNEWTDGDGGDEEDEAALIEA 575 Query: 374 ITFHVCHSPQREVEVLHDRLLAMLEED--------------PTLTPRDIIVMVADIDSYS 419 + E + R+ ML E + RD+++++ +++ Sbjct: 576 VRL--------EARAIAARIRGMLGEGGEPLRIYDKQLQAMRPVAFRDMVILLRSTLTWA 627 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 P + +P + +E +SLL + D+ + A+L P+ Sbjct: 628 PAMI----EELRVEGIPAYGELSQGYFQASEVETMLSLLQVIDNPLQDIPLAAVLRSPL- 682 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 +D +EE L +R + A + Sbjct: 683 ---YDFSEEELADIRLASPSGRYYEAVLARAAAGNAESALSDSRGGDAGEASVYHPETGQ 739 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 + L L + L QL WR + + + R+ + Sbjct: 740 IEPSANDALAL------------KLQAFLRQLEAWRSMARVGQLGDLIREIYRETGYLEW 787 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQ-----ERISQRF 654 + Q + + L + + + Sbjct: 788 VGGLPGGTQRQSNLQALLDRARQYEVSSSAPG--LFRFLRYVTRLRENGGDLGAPGDAGE 845 Query: 655 LAGPVNICTLMPMRSIPFKVVCLLGMND-----------------GVYPRQ-----LAPL 692 V I T+ + + F VV + G++ G P+ Sbjct: 846 QGDGVRIMTIHKSKGLEFPVVFVAGLSKQFNRQDLNAPFLMHKELGFGPKYVDANTRVSY 905 Query: 693 GFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRS-----IQDNSERFPSVL 747 +R ++ + AL + KL + ++ S Sbjct: 906 PTLPNLAIRRRAQMELLAEEMRVLYVALTRPKDKLVLVSSVKNLTKSVEAWGGALEASE- 964 Query: 748 VQELIDYIGQSHYLPGDEALNCDESEARVKA 778 Q+L DY+ D + Sbjct: 965 -QQLPDYLLARGRCYLDWIGPALIRHPSARE 994 >UniRef50_D2RKU2 ATP-dependent nuclease subunit B-like protein n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RKU2_ACIFE Length = 1003 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 100/786 (12%), Positives = 200/786 (25%), Gaps = 109/786 (13%) Query: 353 VNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMV 412 I S ++E+ + + L++ + P +I+V+V Sbjct: 256 DLAALAREWKPGAKCGLAADHIHLGEGASQEQEIRLALTSIKERLQD--GVQPEEILVLV 313 Query: 413 ADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLA 472 + Y + + A +P + +S P+ + LL+ ++ A Sbjct: 314 RKLQDYQGLV-----RSFAQYGIPCRLPLPADLKSQPLPDFLTKLLAAAGEKWDLSLWQA 368 Query: 473 LLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRML 532 L P++ F E L +L G +VR EL + G L + Sbjct: 369 LFRCPLMELLFQTDRENLDFLYT--QAYFSSAGAFLAHVRRKELVSAGFWDLVDFLQQDH 426 Query: 533 LGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCR 592 A L W R + + Sbjct: 427 TPEAWRDG------------------------------LTEWLDRWQLARTWGQLHKEGK 456 Query: 593 DMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQ 652 L+ L + ++ + G + L Q + Sbjct: 457 VDLDQVKLLAGTEDFVRKTLDSLVKTWEQCGEEKSALGLDKIRTF---WKDSLAQASLPL 513 Query: 653 RFL-AGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGD------ 705 + + ++ F V +LG+ +G++P ++ + Sbjct: 514 TPGEPRGIPVREAGEIQGAAFPYVYILGVREGMFPAVKRESWLYSDQERAELNALGLELS 573 Query: 706 --RSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPG 763 D DRY F A A ++L++S+ + E S + L + Sbjct: 574 LTARALDTDRYFFGSAAALASRELHLSWY-----SDEEGGASPYITGLDHFYAPDSLPVT 628 Query: 764 DEALNCDE--SEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFV 821 + D S A + L P + + ++ A + + S + Sbjct: 629 VYEADPDRCASPALLTNCLAEQEWLGPREKETLLAAVGTDFSDRTQSARRRWEEPDSPWN 688 Query: 822 QPLP--FTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDT---EPFILEGLS 876 +P P + +L F P A ++ E P + + L+ Sbjct: 689 GTVPGVVKKPLHLSASSLDAFLQCPFAALVSRVWKLVPWEEQEPWPAPDVVGNLLHQTLA 748 Query: 877 --RYQINQQLLNALVEQDDAERLFR-------RFRAAGDLPYGAFGEIFWETQCQEMQQL 927 Q L A + + L + RF G +P + E +E++ Sbjct: 749 AFLGNHLQTGLEAKDREILEQELEQVYQGIFDRFHQEGKIPDSPLLDHIRERYGKELRTW 808 Query: 928 ADRVIACRQ--------------------PGQSMEIDLACNGVQITGWLPQVQPDGLLRW 967 + P ++ + V +G + ++ +G W Sbjct: 809 LRGELDYEARDQLGLKPWKVEWSFGREHSPWPALTRTVDGKKVWFSGQIDRIDSNGK-TW 867 Query: 968 RPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGY 1027 Q L + L L Sbjct: 868 SLLDYKTGQPPTGQDILQGRAVQLPLYLEALAV----------LGEVDPEAILGGGYVQL 917 Query: 1028 REGMSA--PLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKF-LQAYEGNMMVRGE 1084 G + W++ + L Q+A + + EG R Sbjct: 918 CSGERKGGIWDKAVKDAFPWMQKARPPEKKQAL---EAAQQAMDQAVREIREGKFPARPS 974 Query: 1085 GDDIWY 1090 G + Sbjct: 975 GTCPGW 980 >UniRef50_Q0ATK5 DNA helicase/exodeoxyribonuclease V, subunit A n=1 Tax=Maricaulis maris MCS10 RepID=Q0ATK5_MARMM Length = 1183 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 97/970 (10%), Positives = 211/970 (21%), Gaps = 195/970 (20%) Query: 139 LVYRPDWLA-QWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETL 197 V R + + G + A + T ++ + + L Sbjct: 265 DVTRGETIRVALAAGDPAQAFDAYL---AAFYTKGGTGTRAASLATKTISDRFPHVLSLL 321 Query: 198 ESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYL 257 E+ L + I+ V L+ + + L + D+ A L Sbjct: 322 EAEADRLDALRDMIKRADIARASAVALRIVDDFTRAYSEALEQARALD--FDDLIRLAGL 379 Query: 258 A-------------KLLTRQRRHSFEDRELPLFRDSENAGQLFNS-----------DGEQ 293 KL + ++ + R + L Sbjct: 380 LLAPENPFSGWVGYKLDGQLAHALIDEAQDTAPRQWDMIRGLTAEFFAGAGAQETGRTLF 439 Query: 294 DVGNPLLASWGKLGRDYIYLLSDLES----SQELDAFVDVTPDNLLHNIQSDILELENRA 349 VG+ + + G + + + + + ++ + ++ +IL ++A Sbjct: 440 VVGDEKQSIYSFQGAEPARFIEEGDRIAASAAAVELPFERPGLDVSFRSAPEILTAVDQA 499 Query: 350 VAGVNIE-------------EFSRSDNKRPLDPLDSSITFHVC----------------- 379 ++ + Sbjct: 500 FEAKRPALEMKFVAGATDLPFARYQGHRAARSHTPGCVEIWPAIPKPEKTEEGSIFDPVD 559 Query: 380 -----HSPQREVEVLHDRLLAMLEED-------------PTLTPRDIIVMV--ADIDSYS 419 S + + + M+ + P DI ++V + Sbjct: 560 LRARGSSRDVLAQTVAGEIADMISRGDAVWEEKGGQFTQRPVRPSDIAILVWRRTGGFFE 619 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 I +P A +DR + ++ ++L + + +L P+ Sbjct: 620 EVI-----RQLKLAGVPVAGADRMVLRDQTAVKDMLALGRFAMTSGDDLALAEVLRSPLF 674 Query: 480 ----AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGY 535 A+ I E+ L L + + R + + + + L Sbjct: 675 DPVDPAKAGIDEQALYDLARSRTDLKRRGTLWNALFTSEDPRFADARSALSALRD----- 729 Query: 536 AMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDML 595 + + + E Sbjct: 730 -QADKSRLYDFFTGFLNARTPTGETRWARMF----------------------------- 759 Query: 596 NAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFL 655 Q +A L + + L+ + Q + Sbjct: 760 ----------ARLGEEARDPLQEFLARALQHEREEGGALASFIARIEGEDVQIKREMSPD 809 Query: 656 AGPVNICTLMPMRSIPFKVVCLLGMND----------------GVYPRQLAPLGFDLMSQ 699 V + T+ + + V+ L G+ Q D ++ Sbjct: 810 RDEVQVMTVHASKGLERPVIILPDTTRSPLTGKTTPIFAQTDCGLLWSQRKDDDTDAVAA 869 Query: 700 KPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSH 759 ++ + + + L AL A+ +L + G + D + Sbjct: 870 LRQQSENRQLAEHGRLLYVALTRARDRLIV--CGWRQGQGHP-------GRIADDSWYTQ 920 Query: 760 YLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSE 819 + E V + + F P G + A A Sbjct: 921 LAEAWQGEEWMPFETPVSRLVEDAEPGLRFGPAPVALGAVSEAGAGDTSLPAWARLAAPA 980 Query: 820 FVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQ 879 + P ++ L P +P R Sbjct: 981 EGGQILGAAPSSL--------------------LADADSEPAVLSPLADPGGHR-FRRGD 1019 Query: 880 INQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADR--VIACRQP 937 + +LL L + R R E E + D P Sbjct: 1020 VIHKLLQTLPDLPSDRREAAGQRFL--AAQSDIAESDRAQILTETLGILDHPDFAPLFGP 1077 Query: 938 GQSMEIDLAC------NGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASG 991 G E+ L + I G + ++ G + + + G Sbjct: 1078 GSRAEVALVGQAPGLPANMIIRGQVDRLVVTGD-EVLIIDYKTNRPPPADVAAVAKVYLG 1136 Query: 992 GNGESRLFLR 1001 R LR Sbjct: 1137 QMATYRALLR 1146 >UniRef50_Q2KX58 DNA helicase n=4 Tax=Proteobacteria RepID=Q2KX58_BORA1 Length = 685 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 54/569 (9%), Positives = 129/569 (22%), Gaps = 112/569 (19%) Query: 225 QALQALGK-HIEIHLLFTNPCRYYWGDIKDPAYLAKLL-TRQRRHSFEDRELPLFRDSEN 282 + QA + E H+L + YW ++ +A+ + R ++ + + Sbjct: 195 RLFQAYMQAKQEQHILDYDDLLLYWAEMMSDPGIARDVSARFDYVLVDEYQDTNRLQASI 254 Query: 283 AGQL-FNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD 341 + G VG+ + + +L + ++ + Sbjct: 255 LLAMKPGGQGLTVVGDDAQSIYAFRAATVRNILDFPAQF-----------GAHVITLERN 303 Query: 342 ILELEN---RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLE 398 + + A + + + + D++LA Sbjct: 304 YRSTQPVLDASNAMIAQATERYAKALWTDRAATQKPELVNVSDEVGQARWVADQVLAR-- 361 Query: 399 EDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLL 458 + + + + A R +P+ ++ +S+L Sbjct: 362 REEGESLKSQAALFRTASH-----SAALELELTRRNIPFVKFGGLRFLEAAHVKDLLSVL 416 Query: 459 SLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPA 518 R+ + V+ I L + E Sbjct: 417 -----RWAENPRSRMAGFRVVQLLGGIGPVTAGKLMDLMAE------------------- 452 Query: 519 TGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGL 578 + L + R Sbjct: 453 -----------------------------AADPQVCLANFRTGPQWEGLAQMFSALR--- 480 Query: 579 AQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLR 638 +++ + + + + Q + Sbjct: 481 SEQAGWPADIDLALNWYAPLLEQRYDDAPVRRADLDQLARLA--------SGYPTRERFL 532 Query: 639 DELA----QRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGF 694 EL E + + T+ + +K V +L DG P +A Sbjct: 533 TELTLDPPSATSDESGKPLLDEDYMILSTIHSAKGQEWKSVYILNAVDGCIPSDMAT--- 589 Query: 695 DLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR------SIQDNSERFPS--V 746 G+ +++R L A+ A+++L I R S + + S Sbjct: 590 ---------GNAEEIEEERRLLYVAMTRARERLQIVVPQRFYVHQQSGMGDRHVYASRTR 640 Query: 747 LVQELIDYIGQSHYLPGDEALNCDESEAR 775 + E + + + L A Sbjct: 641 FLPEAMMPLFEHLPKLPASPLGRAAPGAA 669 >UniRef50_Q6APW2 Related to ATP-dependent DNA helicase II (Rep) n=1 Tax=Desulfotalea psychrophila RepID=Q6APW2_DESPS Length = 770 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 69/553 (12%), Positives = 149/553 (26%), Gaps = 72/553 (13%) Query: 184 WHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNP 243 + FI+ +++ P + + + A + L +I Sbjct: 134 RDDLEDFLTFIDLVKAKLASPAQVAREIGLPEKFASFIEGYSLFEDLRLKEKIRFYSELI 193 Query: 244 CRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLF-RDSENAGQLFNSDGEQDVGNPLLAS 302 +D A + R ++ + + + VG+ Sbjct: 194 NEPVLAMEEDAELRAWVENRVEHIIVDEYQDISNCQQGLLKMVAGSRAQVMVVGDADQCI 253 Query: 303 WGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSD 362 + G Y+ F + P + + ++A ++ + Sbjct: 254 YEWRGAKPEYI---------STLFAEDFPAPRDYTLSFSFRYGHQLSLAANHLIAHNIDK 304 Query: 363 NKRPLDPLDSSI--TFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP 420 ++ ++ E L + +D + +I V+V P Sbjct: 305 SRTLCRSHPLNVNTQIFTAELVAGERHPLVGIVRDW--QDSGRSRAEIAVLVRLYGMSVP 362 Query: 421 FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA 480 A + +PY + R P + A I L D + Sbjct: 363 V-----ELALLEAGIPYQLQGGRTVFRCPEILALIGYLRFCDG--------------SIV 403 Query: 481 ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA 540 + L G++ G + + + GL + Sbjct: 404 EISGQERKALVQEMLVQPHLGLKKGQMEHLLVSITASPLAAPALILGLVNEAMPAYQRKR 463 Query: 541 QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL 600 + + A L L+ +L+ L AF+ Sbjct: 464 LARLSDCWQWLVAEPGEARADKVLKRLVARLD----------------------LYAFYR 501 Query: 601 PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN 660 A + + Q +++IA G A L D+ + S A P+ Sbjct: 502 DFASRQVSGENRIQICRSLIAFAEERARGVADFLLEF--------DRLKKSDGAGADPLL 553 Query: 661 ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL 720 I ++ + + +V L G+ +G +P + ++ DD+R LF + Sbjct: 554 ITSIHRAKGCEWPLVILPGLEEGSFPFRRQQKESPSFTE---------VDDERRLFYVGM 604 Query: 721 ISAQQKLYISYIG 733 A ++LY+ + Sbjct: 605 TRAIERLYLLHPR 617 >UniRef50_B9XFA1 Recombination helicase AddA n=1 Tax=bacterium Ellin514 RepID=B9XFA1_9BACT Length = 1211 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 83/841 (9%), Positives = 191/841 (22%), Gaps = 161/841 (19%) Query: 237 HLLFTNPCRYYWGD--IKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL---FNSDG 291 H L + + W + A + + R ++ + L Sbjct: 341 HDLEQHSLQLLWDRNTKQATAVARQWRKKLRFVFVDEYQDINDAQDAILKALSREGEESN 400 Query: 292 EQDVGNPLLASWGKLGRD---YIYLLS--DLESSQELDAFVDVTPDNLLHN--------- 337 VG+ + + D + + + + + + N Sbjct: 401 RFLVGDVKQSIYRFRLADPHIFQNYIETWRGADGKAIPLVDNFRSREAILNFINSLFEGL 460 Query: 338 IQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFH-------VCHS--------- 381 ++ DI + A + + + H Sbjct: 461 MRRDIGSVPYDDEARLRFGNAENRVDLSCAKEDAPRVELHLRLKGSLEAKDMPEGEGEGS 520 Query: 382 -----------PQREVEVLHDRLLAMLEED-----------PTLTPRDIIVMVADIDSYS 419 ++E ++ RLLA+ E +T D+ V++ + Sbjct: 521 RAWTEMMNLEEAEKEARLIGKRLLALKAEKHLAWDEHTKAMRPVTWSDMAVLLRSPARKA 580 Query: 420 PFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVL 479 + + +P ++ + +SLL L D+ LA+L P++ Sbjct: 581 ----ESYAKEFSRLGIPLLVARG-GFYESMEVTDLLSLLQLLDNPLQDVPTLAVLHSPLV 635 Query: 480 AARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMES 539 L + + Sbjct: 636 GM---------------------------------------------SLDELATIRLKLT 650 Query: 540 AQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFF 599 W ++ + ES A L WRR Q V + A + Sbjct: 651 KGPIWMALRRFHESDEEHA-GWKKADRFLKNFASWRRLARQVSLSRCLEAVLSETHYAAW 709 Query: 600 LPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPV 659 L Q+ + + Q D + ++ V Sbjct: 710 LLTQHRGEQRHANVQRLLGLAQQFDRFQRQGLFRFLRFIDAQQAAETEPEVAAVAEEDAV 769 Query: 660 NICTLMPMRSIPFKVVCLLGMNDG----------------------VYPRQLAPLGFDLM 697 ++ ++ + + F VV + + P Sbjct: 770 SLMSVHQSKGLEFPVVVVADLGKPFNMMDLRAEIMLDDKFGLCPQVKPPHTGQRYPSLPY 829 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNS-----------ERFPSV 746 +R + ++ L AL A+ L ++ N + Sbjct: 830 WLARQRQKQEMLGEEMRLLYVALTRARDTLILTGSISEPVFNKRWLETSELTAATLLAAR 889 Query: 747 -LVQELIDYIGQSHYLPGDEALNCD----ESEARVKAHLTCLHTRMPFDPQNYQPGERQS 801 + L + + E + HL + + + Sbjct: 890 NFLDWLAGWCTKITGTVLKENQGRNSLFCWKVYEDDTHLIETSPSAASEAEKMEQTSVPM 949 Query: 802 YAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 A W + + P + L+R A + + ++ Sbjct: 950 DAASWKKLQQKLSWIYPHSAAT---HEPAKTSVSALRRRMAEDIETEARPLFELKSANPQ 1006 Query: 862 SEIPDT-----EPFILEGLSRYQINQQL-----LNALVEQDDAERLFRRFRAAGDLPYGA 911 ++ L + L + ++ R +R A L Sbjct: 1007 TKAQQRKNGNNNSERLSAAEVGTTHHSFLQMVSLERVGSVEELRREAKRLEAEQLLTVEE 1066 Query: 912 FGEIFWETQCQEMQ-QLADRV-IACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRP 969 G + + + +L R+ R + + + + ++ G P+ + Sbjct: 1067 AGSLDFPALAAFWKSELGLRIQRQSRHVRRELAFTVRFSPEEVAGNTPKDPELFDEEFVV 1126 Query: 970 S 970 Sbjct: 1127 V 1127 >UniRef50_UPI0001C31915 UvrD/REP helicase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31915 Length = 1052 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 92/768 (11%), Positives = 198/768 (25%), Gaps = 76/768 (9%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIY 312 P A++ R R +D + P F L + G+ A Sbjct: 221 PHVRARVAARYRHLLVDDVQEPNFAHGLLLRLLASEHGNLTAAGDDDQAIQRFRAAATKN 280 Query: 313 LLSDLESSQELDAFVDVTPDNLLHNIQSDILELEN-RAVAGVNIEEFSRSDNKRPLDPLD 371 L F PD + ++ + A + KR PL Sbjct: 281 L----------RDFQAELPDATVVQLEHSFRCPQRVLDAANAVVAPLEDRIEKRLDGPLG 330 Query: 372 SSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPA 431 + F + + + + + + ++ + P I V+V I + A Sbjct: 331 GEVAFWRSANERAQAQSVAADVERLIGR-EGVPPERIAVLVRSIAREGQAVAV----ALE 385 Query: 432 DRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLR 491 +R + + + A + ++ L L + V+ L P + + Sbjct: 386 ERAVGHRLIGEAAFFQRAEVRDLLAWLRLLIDPADAPAVVRALARPPI-ELRSVDLARCT 444 Query: 492 YLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEW------Q 545 + + + ++ A + GL R +G + + Sbjct: 445 QIARRRKLDMVGALGAALESPQIPPEARDRIRMFLGLYRSAVGAIDTMRPDLFVHRLIER 504 Query: 546 SVLPYDESSGLIAELVGHLASLLM--QLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDA 603 L + AE+V L L +L + E+ A + Sbjct: 505 LGLRRQQLFTAQAEVVERLRGLARFGELATAFTQRQPQATPREFARSIAAAAEAGLREEE 564 Query: 604 ETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLL---------RDELAQRLDQERISQRF 654 E A T Q A+GL + + L + +A L +E + + Sbjct: 565 EPPPATTRGVQVMSMHAAQGLEFDHVFVLGLHAAGLPGAHTRTLEPIAPALMKETLPEDD 624 Query: 655 LAGPV----NICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRD 710 V + + RS V+ +D P F ++ G R Sbjct: 625 HEAHVAEMRRLLHVAMTRSRQRLVLVHPQASDRG--AAQPPSPFAEEARAAVGGVWEERA 682 Query: 711 DDRYLFLEALISA----QQKLYISYIGRSIQDNS-----ERFPSVLVQELIDYIGQSHYL 761 ++ + E+L S + +L + + + S + ++ + + + Sbjct: 683 EELFGPAESLHSTYRILRDELLETIKRTGSRIGELRFDTDLDVSHAIVRYLEVVKLAALI 742 Query: 762 PGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFV 821 + + ++ A V A L T D P + + A A E Sbjct: 743 ERSDDQSVKDALAEVNARLASAITSEQRDILATSPLDEYLLDADRDDRTRAAAIAAREEP 802 Query: 822 QPLPFTLPE----TVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSR 877 PF + + + P++ F ++ ++ Sbjct: 803 SLEPFLPRRGDGVMLSASDIDTYRTCPLKYKFARVFRIPQEPTLNQ------------RF 850 Query: 878 YQINQQLLNALVEQ--DDAERLFRRFRAAGDLPYGAFGEIFWETQC------QEMQQLAD 929 + Q+L ++ L + + + + Sbjct: 851 GILVHQVLERFHSDPSRPSQSLDEMLGLLEFGWRRGGFGGTEQEIQLRGKATAALTRYFE 910 Query: 930 RVIA--CRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVA 975 R + + G + +V + Sbjct: 911 RFQEEPSQPVAFERSFSFRLGPHLLRGRVDRVDKLPEGGFELIDYKTG 958 >UniRef50_B9EAN8 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EAN8_MACCJ Length = 1148 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 75/836 (8%), Positives = 202/836 (24%), Gaps = 130/836 (15%) Query: 210 RVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPA---YLAKLLTRQRR 266 V + ++ + + + L + ++ I + L + + Sbjct: 323 SVEVERLTRMTQMVIDRFSQLKRERKLIDFSDYEHFALQILIHNDEPTEIAHMLKAQYKE 382 Query: 267 HSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQE---- 322 ++ + + D VG+ + + + + + Sbjct: 383 ILVDEYQDTNRVQESIIQAIKRDDNMFMVGDVKQSIYKFRQAEPELFMEKYSHFKSGGPG 442 Query: 323 --LDAFVDVTPDNLLHNIQSDILE-LENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVC 379 +D + + N ++I + + + + ++ P D + H+ Sbjct: 443 KVIDLSQNFRSRRAVINNTNEIFSKIMDEKLGDIIYDDDQMLYYGAPYDDMSQHTELHLL 502 Query: 380 HSPQREV--------EVLHDRLLAMLEEDPTL----------TPRDIIVMVADIDSYSPF 421 + + E+ + D + ++ ++ +DI ++ S + Sbjct: 503 N--KEELNDIEYFASHHIADVIEQIIAQEEVYDVKTGEYRAAQYKDIAILERGFSSAAEH 560 Query: 422 IQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAA 481 + DR +P+ ++ + + +SLL + D+ + LL + Sbjct: 561 M-----KVMKDRKIPFHVNSKEGYFQTDEINTILSLLRVVDNPLQDIPLAGLLRSIIYQF 615 Query: 482 RFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQ 541 L + + Sbjct: 616 DAH----------------------------------------------ELTALRSDCSV 629 Query: 542 GEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLP 601 + ++L Y +G A+L + +L ++ +R + + + D L Sbjct: 630 FLYHNLLSY-SVNGEDAQLKYKVKKVLADISDYREQSRKVSVKDLIDYIYNDTLLIEKFT 688 Query: 602 DAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRD-ELAQRLDQERISQRFL-AGPV 659 + + + Y D L D ++ A V Sbjct: 689 LLPGGHQRQANLEGLLQKAEQFEQSSYRGIYQFLRFVDNILEAGKDFGEMNIVSDEANVV 748 Query: 660 NICTLMPMRSIPFKVVCLLGMNDGVYP----------------------RQLAPLGFDLM 697 + T+ + + F V ++ + Sbjct: 749 RMMTVHASKGLEFPFVIYNNIDRQFNLMETKEQLLLNQRLGLSITFYDKMAHTTYPLAIN 808 Query: 698 SQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQ 757 + + ++ L AL A++KL + + + + ++ + Sbjct: 809 QLFKTKIRNEQVSEELRLMYVALTRAREKLVLVGNVKDDKVIEKFQN----VDVDKKMDD 864 Query: 758 SHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYARE---WLPAASQAG 814 + L L A + R +N +S E WL Sbjct: 865 YYRLSALSPLQFIAPIALHDDSIDVRMIRTLNTLENKATETAESTKAEGVTWLQELKDYR 924 Query: 815 KAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEG 874 + + A Q RL + + + Sbjct: 925 YPYLSENLLPTKESVSEIKKAQETDDEATAWTYINQYRLGKATYDRPKFMSEEKK---TA 981 Query: 875 LSRYQINQQLLNAL--VEQDDAERLFRRFRAAGDLPYGAFGEI----FWETQCQEMQQLA 928 + +++ L + D+E + + + E L Sbjct: 982 AEYGTLMHKVMQHLPRLNNVDSEDIKHFLDDLVNRRIISDEERPLINEKHIYQFTKTVLY 1041 Query: 929 DRVIACRQPGQSMEIDL-------ACNGVQITGWLPQVQPDGLLRWRPSLLSVAQG 977 DR++ + + + + + G + V + Q Sbjct: 1042 DRLVHADEVYFELPFVIGKQYITQSHPDQLVQGMIDCVFKYEGHYYFI-DYKTDQV 1096 >UniRef50_C8SXN2 Exodeoxyribonuclease subunit V gamma (Fragment) n=4 Tax=Enterobacteriaceae RepID=C8SXN2_KLEPR Length = 170 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 119/165 (72%), Positives = 140/165 (84%) Query: 958 QVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQAL 1017 QVQPDGLLRWRPSLLSV+QGMQLWLEHLVYCASGG GESRLF+RK+GEWRFP LA +A Sbjct: 3 QVQPDGLLRWRPSLLSVSQGMQLWLEHLVYCASGGTGESRLFVRKEGEWRFPALAPAEAQ 62 Query: 1018 HYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEG 1077 YL++L++GY GMS PLL+LPESGGAWLK CYDA+ D +L D+ T QKAR+KFLQ YEG Sbjct: 63 AYLNELVDGYLLGMSQPLLLLPESGGAWLKACYDAEKDVILMDEETQQKARSKFLQTYEG 122 Query: 1078 NMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS 1122 NM+V GEG DIWYQRLWR L P E I+ Q+QR+LLPL+R+++S Sbjct: 123 NMVVSGEGADIWYQRLWRSLEPAHYEEIIAQTQRYLLPLYRYHRS 167 >UniRef50_B6XVB6 Putative uncharacterized protein n=2 Tax=Bifidobacterium RepID=B6XVB6_9BIFI Length = 1398 Score = 126 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 63/603 (10%), Positives = 138/603 (22%), Gaps = 98/603 (16%) Query: 176 THQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALP--PVYLQALQAL--- 230 + + L + E L + + + L L L Sbjct: 209 PTEQPKSPKPPKRLKKDSDADYEKKLEKYRELGHSMCVFNSTQLASVAKQRNLLLDLVLD 268 Query: 231 ----GKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQL 286 + + + + P+ A R ++ + + L Sbjct: 269 YHAEKRACNMAEFSDFTIAAFQLVSRFPSIGATYRKRYSHVLLDEYQDTSTTQAALLSAL 328 Query: 287 FNSDG-----EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSD 341 F++D VG+P + + G L+ +DA + Sbjct: 329 FHADDTHRSAVNAVGDPFQSIYAWRGASPGA-FRMLQHDFGMDATRKPFALTVTRRNSRM 387 Query: 342 ILELEN----------RAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHD 391 +LE N R ++ + E + + +I + +EV+ + Sbjct: 388 VLEAANNLTKPLRLPARRLSSSLMREVDVPALSNIEEAPEGTIGVLGFATFGQEVDAVVR 447 Query: 392 RLLAMLEEDPTLTPRD-----------IIVMVADIDSYSPFIQAVFGSAPADRYLPYAIS 440 + + RD + V+ + S + A L + Sbjct: 448 FAKHAIALHTP-SARDLDHGAKNNRPHVAVLFRSKGTMSKY-----AEALEQAGLTTLVV 501 Query: 441 DRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNES 500 + A P + +LL + S ++ LL P RF + + L+ L Sbjct: 502 GQAALLERPEVRDVFALLHVVSDHTDSAALMRLLATP----RFAVEADDLQALADTAERV 557 Query: 501 GIRWGIDD-----------------------------------DNVRELELPATGQHTWR 525 + + + + L + Sbjct: 558 NTVYRYRALVSAGIVPAQTTKAGNSGDSINSGDSRKTSNSENSETISDSGLSNAEIRSIV 617 Query: 526 FGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERP-- 583 + + + L + L +R L P Sbjct: 618 REYRDQVPNAVFLVDLMLRDDLEQLID-GRLSRRGAQAVLRAADTLRQVQRVLGHPLPEV 676 Query: 584 ----LEEWLPVCRDMLNAFFLPDAETEAAMTLI-------EQQWQAIIA-EGLGAQYGDA 631 + +L D ++ Sbjct: 677 VREAITALNLDIDMLLARHMRADHAEAMLDASHVALAKSPIDAVMKLVDTYMQEIASQGL 736 Query: 632 VPLSLLRDELAQR--LDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQL 689 L + +E + V + T+ + + + V ++GM DG +P Sbjct: 737 PSLRAFISWVDSLRDASEENAVAPDVPVDVVLMTVHQSKGLEWDAVAVVGMTDGGFPSNK 796 Query: 690 APL 692 Sbjct: 797 GDN 799 Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 28/261 (10%), Positives = 66/261 (25%), Gaps = 14/261 (5%) Query: 692 LGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSER--------- 742 L + + R D+R L AL A+ + ++Y +++ R Sbjct: 893 DPDGLYLTQSEEYGRRLHADERRLAYVALTRARHEALLTYSETNVESRDPRAVGERKQVA 952 Query: 743 FPSVLVQELIDYIGQSHYLPGDEA-LNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQS 801 PS QE+ D + + + L + + S Sbjct: 953 KPSNFWQEVYDSMHNIVSRADEPSNLGDIAEVEDGADAVFSGDGISGNNASENGISSLHS 1012 Query: 802 YAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTED 861 A + + +RF P R+ Sbjct: 1013 IGAPLPSGYFVGEHACDFEDAVVGDAWNAPLEPLEGERFL--PWPCALTEETCEMLRSSA 1070 Query: 862 SEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL--FRRFRAAGDLPYGAFGEIFWET 919 ++ D L + + + L + G+L + + Sbjct: 1071 DQVRDAMVAGAADLDTGVGVDAVADDVALGSAGSLLHCAQLLVDDGNLMPDMLADASQDA 1130 Query: 920 QCQEMQQLADRVIACRQPGQS 940 + ++ ++++A + + Sbjct: 1131 FDRSVRAQGEKILASGRQNVT 1151 >UniRef50_D1PLS3 ATP-dependent deoxyribonuclease subunit A n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLS3_9FIRM Length = 1160 Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats. Identities = 85/820 (10%), Positives = 173/820 (21%), Gaps = 147/820 (17%) Query: 262 TRQRRHSFEDRELPLFRDSENAGQLF--NSDGEQDVGNPLLASWGKLGRDYIYLLSDLES 319 R ++ + L +D VG+ + + D L Sbjct: 394 ERYSAVLVDEYQDTNALQDAIYFALASPEADNLFFVGDIKQSIYRFRQADPAVFL---GK 450 Query: 320 SQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS------- 372 Q + P + ++ + S+ + D Sbjct: 451 QQCWQPYPQPAPQPATLALDANFRSAPQVIEGINYLFSVFFSEGLGGVTYGDGQRLVVGK 510 Query: 373 ---------SITFHVCHSPQREVEVLHDRLLAMLEED---------PTLTPRDIIVMVAD 414 + + + R+ M++E D +++ Sbjct: 511 PDVSYPGLCEVDVLDGADAAGDAAGIAQRIAGMMQEGFAVRDKTGTRPCRYDDFCILLRG 570 Query: 415 IDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALL 474 +S ++ A +P P + F +LL + D+ + A+L Sbjct: 571 RADFS-----IYEEALRAAEIPVFADTAADLLDAPHIRPFAALLRVIDNPAQDIPLAAVL 625 Query: 475 DVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLG 534 P+ F T + L LR+ + + + Sbjct: 626 LSPM----FPYTPDDLVSLRRACPQGSLYGAVLYGGQPRFAAFTES-------------- 667 Query: 535 YAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDM 594 L + R L +R LEE L R Sbjct: 668 ---------------------------------LAEYRRLARTLPVDRLLEELLA--RTG 692 Query: 595 LNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLD----QERI 650 A + + ++ A LS L + + Sbjct: 693 YLAAVGALPDGARCR-------EDLLTFVTWAGGAGRAGLSALVRAMDSAAANGGLNQSG 745 Query: 651 SQRFLAGPVNICTLMPMRSIPFKVVCLLGM------NDGVYP----------------RQ 688 + G V+I T+ + + F VV + +D + P + Sbjct: 746 GGQTRPGCVSIMTVHRSKGLEFPVVFVANTAHQFNQSDAIRPVLTHSRLGVGVMLRAGKS 805 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLV 748 + + ++ + AL AQ L ++ + + + Sbjct: 806 AKRYKTLPYAALAQAIRTETLSEEMRVLYVALTRAQDALIVTIPLKKTDSALKTPA---L 862 Query: 749 QELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLP 808 + G + + L P P + + P Sbjct: 863 CAAAEATGPEAMQGMSSWAGWLLTAVLLHPESDALWAHTPLLPHHLPTKVPLTVRLLPAP 922 Query: 809 AASQAGKA---HSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIP 865 A V ++ P + Sbjct: 923 EAMPEQPPCLEVQPDVSLRRALEETFAWHNPREKLQKIPAKVSVSAVTHGARPVALERPA 982 Query: 866 DTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQ 925 + + G R L ++ A L + DL + ++ Sbjct: 983 FLQKSGMTGAERGTAIHAFLQSVPFDGPAPDLQAEVQRQKDLRLLDADLAEKLDLER-VR 1041 Query: 926 QLAD-----RVIACRQPGQSMEIDLAC-------------NGVQITGWLPQVQPDGLLRW 967 + R+ A R+ + A V + G V Sbjct: 1042 PFFESGVWRRIRAARRVLREEPFITALPASQVAPEAGQSDAEVLVQGIADLVLV-FDDHA 1100 Query: 968 RPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWR 1007 + Y A LR Sbjct: 1101 EICDYKTDASREPEFYKKEYAAQLQLYRHAFALRLGVPVT 1140 >UniRef50_A7IDE0 UvrD/REP helicase n=2 Tax=Rhizobiales RepID=A7IDE0_XANP2 Length = 1107 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 102/979 (10%), Positives = 223/979 (22%), Gaps = 146/979 (14%) Query: 100 PQLLEREDFTLLRHYLTDDSDKRKLFQLSSKA---ADLFDQYLVYRPDWLAQWETGHLVE 156 P + E R +L+ + K +L + AD F P + W Sbjct: 210 PDIDLVEAVADFRRWLSAQPLEPKTLELVGQLETLADHFAGSFATAPVFDTLW-RLAHPA 268 Query: 157 GLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGI 216 L + + L + + A L C + RV + Sbjct: 269 RLPCMRRYTFDLLTPRTKTAWDKAAGKDRGAELNAEAGRHFARVDHCYRVILGRVATALV 328 Query: 217 SALPPVYLQALQALG---KHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRE 273 + L + L + + R A L R ++ + Sbjct: 329 AKLSDELDEVLADYAAFKRAAAVLDFDDLLERARALVRGHDAVRRALGQRYSHIFVDEFQ 388 Query: 274 LPLFRDSENAGQLFNSDG-------------EQDVGNPLLASWGKLGRDYIYLLSDLESS 320 +E ++ D VG+P A + G D ++ S+ Sbjct: 389 DTDPIQAEILFRIAADDSPPRWQDSRLRAGALFMVGDPKQAIYRFRGADVGSY-AEARSA 447 Query: 321 QELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDS-------- 372 ++ + IL NR A + + Sbjct: 448 IARRWPNNIVQITANFRSRPAILSHINRCFATPLSAQNQPGYVELAPTLDPPDHDLPCAA 507 Query: 373 SITFHVCHSPQR------EVEVLHDRLLAMLE---------EDPTLTPRDIIVMVADIDS 417 IT + + E EV+ D ++ + LTP I ++ Sbjct: 508 KITIDLPPDSRAAQIRDAEAEVVADLCARLIGNVTIRDEDGDLAPLTPGGIALLAPTGSE 567 Query: 418 YSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVP 477 + A R L A + ++ ++L+ + + AL+ P Sbjct: 568 L-----WRYERAFEARGLRIASQAGKGLFRRQEVQDLVALVRVLADGGDTLAFGALMRGP 622 Query: 478 VLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAM 537 ++ + + + Sbjct: 623 LVG--------------------------------------------LSEEELLDITAGL 638 Query: 538 ESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNA 597 +++ + ++ +L L RR P + Sbjct: 639 PPLADRPEAIPRFSLATDADDVAHPVARRVLTILQDLRRRARATTPALLLAEAVERLAVR 698 Query: 598 FFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLS-LLRDELAQRLDQERISQRFLA 656 L E + + +A++ + + + Sbjct: 699 PILSAREGDRSAR-AAANVEALLERARPYGVKGMKRFARDVSRDWRGGAAYNEGRVDADG 757 Query: 657 GPVNICTLMPMRSIPFKVVCLLG---MNDGVYPRQLAPLGFDL-----------MSQKPK 702 + I T+ + + + VV + + P L + + Sbjct: 758 DAIEIITIHSAKGLEWPVVIPINTATLLRSREPFVHRADDDTLHWVIGDVVPPELRAALE 817 Query: 703 RGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLP 762 D S + L+ A A++ L + + ++ + +V D + + Sbjct: 818 TDDESLTRERERLWYVACTRARELLIV----PELAQAEQKSWARVVNLGHDALPELDISR 873 Query: 763 GDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQ 822 A ++ + + + Sbjct: 874 MTPAPMPMSADPPNTQTAELFAAERATIEEAAVALTWVRPSDHDPDRLEAVEAITLDAGD 933 Query: 823 PLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQ 882 LP VR +L + + + F+ Sbjct: 934 APEVDLPVGAGR----------VRGLLLHKL-MEEVLSGELVEEVGRFVSRAREL----- 977 Query: 883 QLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSME 942 L +++ DD+E L + Q ++ L DR+ Sbjct: 978 -LTELVLDPDDSEALPDS--------DEIAATAWRTLQLPDIAALRDRLTPEWPVY--AL 1026 Query: 943 IDLACNGVQITGWLPQVQPDGLLRWRPSLLSVA------QGMQLWLEHLVYCASGGNGES 996 ++ + + G + + G + Y + G Sbjct: 1027 LEDSSKPRALAGRIDAIAYTGDRAEVVVDWKSDVDPSDADIRLHAGQLEDYLRATGAPRG 1086 Query: 997 RLFLRKDGEWRFPPLAAEQ 1015 L G R+ E+ Sbjct: 1087 ALVYMTPGLVRWVAGRDER 1105 >UniRef50_A6P0W2 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6P0W2_9BACE Length = 702 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 72/521 (13%), Positives = 141/521 (27%), Gaps = 104/521 (19%) Query: 216 ISALPPVYLQALQ--ALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRE 273 A Y +AL+ L + + + R Y P L + R R + ++ + Sbjct: 175 FPAFYQAYCKALRDRQLMDYDDQMVYALQILRQY------PQILGAVRDRYRYYCVDEAQ 228 Query: 274 LPLFRDSENAGQLFNSD-GEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPD 332 L VG+ + +G Q L F V P Sbjct: 229 DTSKIQHTIIRLLAGQSGNLFMVGDEDQSIYGFRAA----------YPQALTEFDRVYPH 278 Query: 333 NLLHNIQSDILELENRAVAGVNI---EEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVL 389 + ++ + E A + + R + + Q++ L Sbjct: 279 AKVLYMEQNYRSTEQIVAAADRFIQKNKNRHPKHMRATRGSGPELREISVYDRQKQYRYL 338 Query: 390 HDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRA-RQSH 448 M E T + V+ D DS P + +PY + ++ Sbjct: 339 C----KMAENCET----ETAVLYRDNDSALPLM-----DLLERSGIPYRCRQVESVFFTN 385 Query: 449 PVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDD 508 V+ ++ L + +E L + Sbjct: 386 RVVRDITDIIRLAQAPGNAEYFLNIYY--------------------------------- 412 Query: 509 DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLL 568 G++R L A A +++L Y SS + Sbjct: 413 --------------KLGAGISRTLAQEAAAQAGRAGETILEYIASSSSASPWTRKQ---C 455 Query: 569 MQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQY 628 L L E + M +L D + I + Sbjct: 456 RALQTHMNNLLDEPADRAVYRIVHFMGYGAYLEDRGGDLNKAEILEAL-----------G 504 Query: 629 GDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQ 688 + L + L + + + P + T+ + + + V L+ + DG+ P+ Sbjct: 505 AEEPTPWRLLERLEELREVVQAGAGTPDCPFVLSTIHSSKGLEYDRVILMDVADGMLPKA 564 Query: 689 LAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYI 729 L + P + +++R LF + A+++L I Sbjct: 565 -------LPQRDPSPQELDLYEEERRLFYVGMTRAKRELDI 598 >UniRef50_B9CK51 UvrD/REP helicase n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CK51_9ACTN Length = 1169 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 82/797 (10%), Positives = 193/797 (24%), Gaps = 123/797 (15%) Query: 254 PAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQD--VGNPLLASWGKLGRDYI 311 P + ++ + ++ + + +L D VG+ + +G D Sbjct: 353 PELAGEYSSKFKLVMVDEFQDTNEQQVRMIKRLAGEDARFLTTVGDAQQSIYGFREADVE 412 Query: 312 YLLSDLES--SQELDAFVDVTP--DNLLHNIQ---------SDILELENRAVAGVNIEEF 358 + + +D D++L ++ D ++L+ + Sbjct: 413 VFFERQKEIPEENRPLLIDNFRSHDDILRFVKAVCGAEGMIPDFMDLKASRRESSGPLQN 472 Query: 359 SRSDNKRPLDPLDSSITFHVCHSPQRE---VEVLHDRLLAMLEEDPTLTPRDIIVMVADI 415 + L ++ + + E L DR+ ++ E +DI +++ + Sbjct: 473 NIPRVMVELTAVEKKGNKRAAKADVYQRVAAEQLADRIARIISEGV-FQAKDIAILMTSV 531 Query: 416 DSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLD 475 S +I A R + +S P ++ +LLS +E L + Sbjct: 532 KDASLYI-----EALRQRGIESVLSGGTGFGQLPEVQTIAALLSALADIHDTEQGLFPVL 586 Query: 476 V----PVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRM 531 + A+ F + L +V + I G+ P+ L + Sbjct: 587 TSGMFSLEASDFVLLSTDLTKREGFVFKRPIEGGLLTQEFSGDHQPSCRLKRALTILNQA 646 Query: 532 LLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVC 591 A++ Q V+ W+ Sbjct: 647 KRDIAVKDVATVIQQVIKASG----------------------------------WIERL 672 Query: 592 RDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERIS 651 DA+ + I + + G + + L + Sbjct: 673 ET-------GDAQERSQAANILAAIRRVRELERDLGVGPSQLSVAFKHWLKVTKAAPVVL 725 Query: 652 QRFLAGPVNICTLMPMRSIPFKVVCLLGM---NDGVYPRQLAPLGFDLMSQKPKRGDRSR 708 V I T+ + +KVV ++G D P L + +++ R Sbjct: 726 NDERQDAVKIQTIHASKGKEYKVVAVVGALKDLDQRAPSTKRCLIGRVDAKRIVALKPPR 785 Query: 709 RD---------------------------------DDRYLFLEALISAQQKLYISYIGRS 735 + + L L A++ + ++ Sbjct: 786 TELRGDKIPEDISQCKTICDWRLYLDETQNAAAQAEAIRLLYVGLTRAREMVILTATAIQ 845 Query: 736 IQDNS------ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPF 789 + + S +++E D + ++ P + + + + Sbjct: 846 QKAAGFSPKLTKAVISSILKE--DSLPRAGESPFEYGGSQAGVCRTLYVRFSEQADGYAL 903 Query: 790 DPQNYQPGERQSYAREWLPAA--SQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRA 847 D + S A+E S E +L + + Sbjct: 904 DGVDLDQTRTMSDAQENQAGLTFDLYAPETSVPQAKKETNYQEFYSYSSLHQQINDKFQE 963 Query: 848 FFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERL--FRRFRAAG 905 + + + + + S +L +VE D R Sbjct: 964 VSEQQETLQGKEASQDGGAEGET--SATSFGSTFHELAQYMVEADAYPERSTIERIAIQN 1021 Query: 906 DLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLA---CNGVQITGWLPQVQPD 962 + + + M L + + G + + + Sbjct: 1022 HVQKSLMSRLESALTLWNNSDVRAEARKYACVCAEMPFCLEQVYGDKKYLNGAIDLLATN 1081 Query: 963 GL-LRWRPSLLSVAQGM 978 Sbjct: 1082 PKSTEAFVVDYKTGDKN 1098 >UniRef50_Q0A7Z8 UvrD/REP helicase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A7Z8_ALHEH Length = 683 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 72/602 (11%), Positives = 154/602 (25%), Gaps = 92/602 (15%) Query: 170 KALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPG----LPSRVFICGISALPPVYLQ 225 + +++ P R + L +A P P R + + P + Sbjct: 112 RRMLDALLAGPFPDRTRRQRAMEAQDALAAAGLDPTEPDHLAPMRDALEAMGFGPGATAR 171 Query: 226 ALQALGKHIE------IHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRD 279 +Q L ++ I + P A+L + R + ++ + Sbjct: 172 LVQRLRRYDAEKRRAAIMDFADLILLPSRLLRQAPDLRARLREQLRDITVDEAQDTDGAQ 231 Query: 280 SENAGQLFNSDG-EQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNI 338 L + VG+ A + L +E Q ++ + Sbjct: 232 FHLLSLLIPENRTVVLVGDDDQAIYEWRHARPANLRRFIEEQQ-----------ARVYRL 280 Query: 339 QSDILELENRAV-AGVNIEEFSRSDNKRPL----DPLDSSITFHVCHSPQREVEVLHDRL 393 + + A + + KRP + +T + E + + Sbjct: 281 ERNYRSTPPIVDGAVSLVRHNRQRLEKRPWAVRGPEQAAPVTLVRHTRAEEMAEAVVQDI 340 Query: 394 LAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEA 453 + L L+ ++ V+ + A +PY + H + Sbjct: 341 RSRLRA--GLSADEVAVLYRKNR-----LARPLEGALLRHGIPYRVKAGMDLLGHADVRM 393 Query: 454 FISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRE 513 ++ L +R L L + G R + Sbjct: 394 MLAAGRLAANRRD--------------------VRALSRLADLIPGLGARGVSRLISSAG 433 Query: 514 LELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNI 573 L A GQ + L A+++ +++ LN Sbjct: 434 DPLTAAGQLPPQAAQAVERLRQALDNLFRL---------GPQALSQWCLQTPVFAEWLNH 484 Query: 574 WRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVP 633 R + L + A+ ++ P Sbjct: 485 RARAALKRDGSRAAPEALDRALKPARARLGAVQRAINRRLAALDR-----------ESAP 533 Query: 634 LSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLG 693 + L S A V +C++ + + + V + G +G+ P Sbjct: 534 AQRWTNALEIAASASDDSSGEDA-CVTLCSVHGAKGLEWPEVHVFGFTEGLMP------- 585 Query: 694 FDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGR----SIQDNSERFPSVLVQ 749 + G +++R L A+ Q ++ + + R Q S ++ Sbjct: 586 ------LARDGRVDNLEEERRLAYVAITRGQDRVVLHHADRIDRGDGQGVGAAALSPFLE 639 Query: 750 EL 751 EL Sbjct: 640 EL 641 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.110 0.256 Lambda K H 0.267 0.0335 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,511,120,125 Number of Sequences: 3077464 Number of extensions: 160304348 Number of successful extensions: 733954 Number of sequences better than 1.0e-01: 1000 Number of HSP's better than 0.1 without gapping: 3408 Number of HSP's successfully gapped in prelim test: 4159 Number of HSP's that attempted gapping in prelim test: 701193 Number of HSP's gapped (non-prelim): 15776 length of query: 1122 length of database: 1,040,396,356 effective HSP length: 140 effective length of query: 982 effective length of database: 609,551,396 effective search space: 598579470872 effective search space used: 598579470872 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 98 (42.6 bits)