57 c1rnlA_ Probab=99.87   E-value=1.8e-21  Score=141.81  Aligned_columns=184  Identities=25%

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEE
Q ss_conf             88569998599899999999999889--8999998989999999858998799612222211110126889727766503
Q batch____         3 ENYKILVVDDDMRLRALLERYLTEQG--FQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPII   80 (239)
Q Consensus         3 ~~~rILivedd~~~~~~l~~~L~~~g--~~v~~a~~~~eal~~l~~~~~dlvildi~~~~~~g~~~~~~lr~~~~~~~ii   80 (239)
                      +++|||||||||.++..+...|+..+  ..|.+|.|+.+|++.+.+..||++++|+.+|+++|...++.++...+..+++
T Consensus         1 ~pi~Ilivdd~~~~~~~l~~~L~~~~~~~~v~~a~~~~eal~~~~~~~pdiilld~~l~~~~g~~~~~~~~~~~~~~~~~   80 (200)
T c1rnlA_           1 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIV   80 (200)
T ss_dssp             CCEEEEEECSCHHHHHHHHHHHHTCTTEEEEEEESSHHHHHHHHHHHCCSEEEEETTCGGGCHHHHHHHHTTSCCCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf             97089997499899999999998489817999978989999999871997554211111000136899974203100123


Q ss_pred             EECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf             31135778886666654304543113212343000011011100000111111112222223234532110101232100
Q batch____        81 MVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMP  160 (239)
Q Consensus        81 ~lt~~~~~~~~~~~~~~ga~dyl~Kp~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (239)
                      +++..............+..++..++.....+......                     .....................
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~  139 (200)
T c1rnlA_          81 VFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ---------------------AAAGEMVLSEALTPVLAASLQ  139 (200)
T ss_dssp             EECSCSCHHHHHHHHHTTCSEEECTTSCHHHHHHHHHH---------------------HHHSCCCCCTTTHHHHHHHCC
T ss_pred             CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC---------------------CCCCCCCCCCCCCCCCCCCCC
T ss_conf             44453101110000112222221001222222222222---------------------222222222222211111111


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf             11112110012332101144699999985158888864289999999999733257
Q batch____       161 LTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDP  216 (239)
Q Consensus       161 lt~~e~~ll~~l~~~~~~~vsr~~l~~~vw~~~~~~~~r~i~~~I~rLR~kL~~~~  216 (239)
                      ++++|..++.++...    .|..+|++.+     ..+.+||++|+++|++||+..+
T Consensus       140 lt~re~~vl~~~~~g----~s~keIA~~L-----~iS~~TV~~h~~~i~~KL~v~n  186 (200)
T c1rnlA_         140 LTPRERDILKLIAQG----LPNKMIARRL-----DITESTVKVHVKHMLKKMKLKS  186 (200)
T ss_dssp             CCHHHHHHHHHHHTT----CCHHHHHHHH-----TCCHHHHHHHHHHHHHHTTCCS
T ss_pred             CCCCCCCCCCCCCCC----CCHHHHHHHH-----CCCCHHHHHHHHHHHHHCCCCC
T ss_conf             222111112224567----7689989886-----8870699999999999817998