14/01/2012 19:05:26 : INFO  : Run start: Sat Jan 14 19:05:25 GMT 2012
14/01/2012 19:05:31 : INFO  : Initialised job
14/01/2012 19:05:33 : INFO  : Renaming log file 'phyre2_20120114_190525.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/c9f8ca49a98b7c75/phyre_20120114_190525.log'
14/01/2012 19:05:34 : INFO  : Initialised job:
Sequence
>batch____
MRADKSLSPFEIRVYRHYRIVHGTRVALAFLLTFLIIRLFTIPESTWPLVTMVVIMGPIS
FWGNVVPRAFERIGGTVLGSILGLIALQLELISLPLMLVWCAAAMFLCGWLALGKKPYQG
LLIGVTLAIVVGSPTGEIDTALWRSGDVILGSLLAMLFTGIWPQRAFIHWRIQLAKSLTE
YNRVYQSAFSPNLLERPRLESHLQKLLTDAVKMRGLIAPASKETRIPKSIYEGIQTINRN
LVCMLELQINAYWATRPSHFVLLNAQKLRDTQHMMQQILLSLVHALYEGNPQPVFANTEK
LNDAVEELRQLLNNHHDLKVVETPIYGYVWLNMETAHQLELLSNLICRALRK

14/01/2012 19:05:35 : INFO  : Checked sequence
14/01/2012 19:05:38 : INFO  : Finding homologues with PSI-BLAST
14/01/2012 19:05:39 : INFO  : PSI-BLAST 3 iterations
14/01/2012 19:07:23 : INFO  : PSI-BLAST 5 iterations
14/01/2012 19:09:28 : INFO  : Finished PSI-BLAST
14/01/2012 19:09:30 : INFO  : Running Buildali to generate a3m file
14/01/2012 19:17:01 : INFO  : Converting to HMM
14/01/2012 19:17:05 : INFO  : Calibrating HMM
14/01/2012 19:17:22 : INFO  : Searching HMM database
14/01/2012 19:23:11 : INFO  : Finished buildali
14/01/2012 19:23:13 : INFO  : Predicting secondary structure
14/01/2012 19:23:19 : INFO  : Predicted secondary structure (PSI-Pred)
14/01/2012 19:23:20 : INFO  : Predicting Disordered regions
14/01/2012 19:23:24 : INFO  : Predicted Disorder (Disopred)
14/01/2012 19:23:25 : INFO  : Running memsat_svm check
14/01/2012 19:27:44 : INFO  : Running memsat_svm full
14/01/2012 19:31:39 : INFO  : Predicted Transmembrane (memsat_svm) ID 'c9f8ca49a98b7c75'
14/01/2012 19:31:41 : INFO  : Initialising fold library search
14/01/2012 19:31:45 : INFO  : Initialised search input
14/01/2012 19:31:50 : INFO  : Building Ensemble models
14/01/2012 19:31:53 : INFO  : Building hh.d1rwta_.model.1.pdb
14/01/2012 19:32:08 : INFO  : Building d1rwta_.1.pdb
14/01/2012 19:32:22 : INFO  : Building c1oy8A_.2.pdb
14/01/2012 19:32:37 : INFO  : Building d3cx5h1.3.pdb
14/01/2012 19:32:51 : INFO  : Building d2b0ha1.4.pdb
14/01/2012 19:33:07 : INFO  : Building c3cwbT_.5.pdb
14/01/2012 19:33:20 : INFO  : Building c3k07A_.6.pdb
14/01/2012 19:33:34 : INFO  : Building d2r6gf1.7.pdb
14/01/2012 19:33:47 : INFO  : Building d1fx8a_.8.pdb
14/01/2012 19:34:00 : INFO  : Building c1ldaA_.9.pdb
14/01/2012 19:34:12 : INFO  : Building c2yzwA_.10.pdb
14/01/2012 19:34:24 : INFO  : Building d1iwga8.11.pdb
14/01/2012 19:34:39 : INFO  : Building c2kvpA_.12.pdb
14/01/2012 19:34:51 : INFO  : Building c2xq2A_.13.pdb
14/01/2012 19:35:04 : INFO  : Building c2wse4_.14.pdb
14/01/2012 19:35:17 : INFO  : Building c2wocA_.15.pdb
14/01/2012 19:35:30 : INFO  : Building c3hfwA_.16.pdb
14/01/2012 19:35:43 : INFO  : Building c3g9dB_.17.pdb
14/01/2012 19:35:55 : INFO  : Building c2ht2B_.18.pdb
14/01/2012 19:36:07 : INFO  : Building d1j4na_.19.pdb
14/01/2012 19:36:17 : INFO  : Building c3oq3A_.20.pdb
14/01/2012 19:36:43 : INFO  : Finished HH model building
14/01/2012 19:36:45 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
14/01/2012 19:38:02 : INFO  : html domain output complete ID 'c9f8ca49a98b7c75'
14/01/2012 19:48:44 : INFO  : Run end  : Sat Jan 14 19:48:43 GMT 2012
