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| Job Description | P77249 | | Confidence | 5.90% | Date | Thu Jan 5 12:26:49 GMT 2012 |
| Rank | 98 | Aligned Residues | 74 |
| % Identity | 9% | Template | c1kriA_ |
| PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:vp4; |
PDBTitle: nmr solution structures of the rhesus rotavirus vp4 sialic2 acid binding domain without ligand
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| Resolution | UNK |
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140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
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| Query Sequence |   |
L | R | P | I | Q | L | Q | E | L | P | A | E | A | P | D | T | L | K | F | S | R | S | G | N | Y | I | N | V | H | N | P | S | P | F | Y | V | T | L | V | N | L | Q | V | G | S | Q | K | L | G | N | A | M | A | A | P | R | V | N | S | Q | I | P | L | P | S | G | V | Q | G | K | L | K | F | Q | T | V | N |
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| Template Conservation |   |
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| Template Sequence |   |
Y | Q | P | T | T | F | N | P | P | V | D | . |
Y | W | M | L | L | A | P | T | A | A | G | V | V | V | E | G | T | N | N | T | D | R | W | L | A | T | I | L | V | E | P | N | V | T | S | E | T | R | S | Y | T | L | F | G | T | Q | E | Q | I | T | I | A | N | A | S | Q | T | . |
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| Template Known Secondary structure |   |
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| Template Predicted Secondary structure |   |
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69 | 70 | . | . | . | . | . | . | . | . | . | |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
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. | . | . | 140 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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