7 c3rfaA_ Probab=99.83   E-value=5.7e-18  Score=146.22  Aligned_columns=211  Identities=13%

Q ss_pred             CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHH----------CCCEEEEEECCCCCCCCCCC
Q ss_conf             56678259998048998856201114545881414889999999999970----------79889997414321125767
Q batch____       142 PRAEGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDDILFEIAQLAAQ----------GVREVNLLGQNVNAWRGENY  211 (474)
Q Consensus       142 ~~~~~~~a~i~isrGC~~~CsFC~~p~~rG~~rsr~~e~Iv~ei~~l~~~----------G~kei~l~g~~~~~y~~d~~  211 (474)
                      |+..+...-|.+|.||+++|+||.++.. |..|.+++++|++++..+.+.          .+..+++.       |...+
T Consensus        94 ~~~~r~t~cissqvGC~~~C~FC~t~~~-g~~R~ls~~EIv~qv~~~~~~~~~~~~~~~~~i~~vv~~-------g~GEP  165 (333)
T c3rfaA_          94 PEDDRATLCVSSQVGCALECKFCSTAQQ-GFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMM-------GMGEP  165 (333)
T ss_dssp             ECSSCEEEECCCEEECSSCCTTCGGGTT-CEEEECCHHHHHHHHHHHHHHHCCHHHHSSCSCSEEEEC-------SSSCG
T ss_pred             EECCCEEEEEECCCCCCCCCEEEECCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE-------CCCCC
T ss_conf             6389038997267575366703411244-850135889999999999986414332035542125750-------58632


Q ss_pred             CCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHH---HCCCCCHHHHHH
Q ss_conf             89988999999999733898289995212111899999999967985557876032299889997---288989989999
Q batch____       212 DGTTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNL---MGRTHTALEYKA  288 (474)
Q Consensus       212 ~~~~~~l~~Ll~~l~~~~~~~~ir~~~~~p~~l~~ell~~l~~~g~~~~~i~igieSgs~~vL~~---m~R~~t~e~~~~  288 (474)
                      ..+...+.++++.+.+..+................+.+..|++.+  +..+.++++|+++++.+.   ++|+++.+++.+
T Consensus       166 l~n~~~v~~~l~~l~~~~gl~i~~~~itvst~g~~~~i~~L~~~~--~~~l~isl~a~~~e~r~~l~p~~k~~~l~~i~~  243 (333)
T c3rfaA_         166 LLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMI--DVALAISLHAPNDEIRDEIVPINKKYNIETFLA  243 (333)
T ss_dssp             GGCHHHHHHHHHHHHSTTTTCCCGGGEEEEESCCHHHHHHHHHHC--CCEEEEECCCSSHHHHHHHSGGGGTSCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHC--CCEEEECCCCCCHHHHHHHEECCCCCCHHHHHH
T ss_conf             249899999999852115524301121015755417899987315--848998067798778623140678889999999


Q ss_pred             HHHHHHHHCCC---CEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHCCCCCCHHHHHHHHHHH
Q ss_conf             99999983699---389988997499979999999999998579776999852169868246776788989999999999
Q batch____       289 IIRKLRAARPD---IQISSDFIVGFPGETTEDFEKTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQRLYIL  365 (474)
Q Consensus       289 ~v~~l~~~~pg---i~i~~d~IvG~PgET~ed~~~tl~~i~~~~~~~v~vf~ysp~pGTpa~~~~~~v~~~~k~~R~~~l  365 (474)
                      +++.+.+....   -....++|++-|+||+||+++++++++.++. ++++.+|.|.|||+    -...+.+...+..+.|
T Consensus       244 ~~~~~~~~~~~~g~~v~i~y~li~g~nDs~e~a~~l~~~l~~~~~-~Vnlip~nP~~g~~----~~~p~~e~i~~f~~~L  318 (333)
T c3rfaA_         244 AVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC-KINLIPWNPFPGAP----YGRSSNSRIDRFSKVL  318 (333)
T ss_dssp             HHHHHHHHCTTTTTCEEEEEEEBTTTTCSHHHHHHHHHHTTTSCE-EEEEEECCCCTTCC----CCBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCC-EEEEEECCCCCCCC----CCCCCHHHHHHHHHHH
T ss_conf             999999977643980899855408999898999999999850898-79999624688888----7788989999999999


Q ss_pred             HH
Q ss_conf             99
Q batch____       366 QE  367 (474)
Q Consensus       366 ~~  367 (474)
                      ++
T Consensus       319 ~~  320 (333)
T c3rfaA_         319 MS  320 (333)
T ss_dssp             HH
T ss_pred             HH
T ss_conf             97