BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (305 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P46125 Inner membrane protein yedI n=318 Tax=Bacteria R... 592 e-168 UniRef50_D0J5H4 Hypothetical conserved protein n=2 Tax=Comamonas... 326 7e-88 UniRef50_B1KFT3 Putative uncharacterized protein n=4 Tax=Proteob... 320 3e-86 UniRef50_C6AJU4 Inner membrane protein YedI n=20 Tax=Proteobacte... 262 1e-68 UniRef50_D0W1M0 Inner membrane protein YedI n=2 Tax=Proteobacter... 253 6e-66 UniRef50_A0M4Q9 Membrane protein containing DUF808 n=17 Tax=Bact... 242 1e-62 UniRef50_A5P853 Putative uncharacterized protein n=1 Tax=Erythro... 200 5e-50 UniRef50_A8EUP4 Conserved hypothetical membrane protein (DUF808)... 199 1e-49 UniRef50_B8H5Q0 Conserved membrane spanning protein n=64 Tax=Bac... 191 3e-47 UniRef50_B2SBI3 Tetracycline resistance protein n=34 Tax=Brucell... 186 1e-45 UniRef50_D2QIJ1 Putative uncharacterized protein n=1 Tax=Spiroso... 183 7e-45 UniRef50_C7NKD3 Uncharacterized conserved protein n=2 Tax=Actino... 182 1e-44 UniRef50_B8IG37 Putative uncharacterized protein n=5 Tax=Rhizobi... 178 2e-43 UniRef50_C7R5J1 Putative uncharacterized protein n=3 Tax=Actinom... 171 3e-41 UniRef50_B8R4L5 Putative ABC transport system membrane protein n... 168 3e-40 UniRef50_B6IVS2 Inner membrane protein, putative n=3 Tax=Alphapr... 165 2e-39 UniRef50_C8NMU2 Membrane protein n=36 Tax=Bacteria RepID=C8NMU2_... 164 3e-39 UniRef50_C6S5Y4 Putative uncharacterized protein n=5 Tax=Neisser... 148 3e-34 UniRef50_B8HHA1 Putative uncharacterized protein n=2 Tax=Bacteri... 143 9e-33 UniRef50_C7MEM6 Uncharacterized conserved protein n=28 Tax=Bacte... 138 3e-31 UniRef50_Q9ZAK8 Putative uncharacterized protein mutK n=1 Tax=Vi... 102 2e-20 UniRef50_UPI000050FF39 hypothetical protein BlinB_11411 n=1 Tax=... 102 2e-20 UniRef50_B3SFI5 Putative uncharacterized protein n=2 Tax=cellula... 62 2e-08 UniRef50_UPI0001AF2FA6 hypothetical protein Psyrpo1_12001 n=1 Ta... 61 4e-08 UniRef50_Q6LGY0 Putative uncharacterized protein SF2002 n=1 Tax=... 55 3e-06 >UniRef50_P46125 Inner membrane protein yedI n=318 Tax=Bacteria RepID=YEDI_ECOLI Length = 305 Score = 592 bits (1525), Expect = e-168, Method: Compositional matrix adjust. Identities = 305/305 (100%), Positives = 305/305 (100%) Query: 1 MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVV 60 MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVV Sbjct: 1 MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVV 60 Query: 61 WGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKED 120 WGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKED Sbjct: 61 WGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKED 120 Query: 121 PAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSG 180 PAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSG Sbjct: 121 PAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSG 180 Query: 181 IALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAM 240 IALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAM Sbjct: 181 IALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAM 240 Query: 241 FLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVEKM 300 FLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVEKM Sbjct: 241 FLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVEKM 300 Query: 301 RGQAH 305 RGQAH Sbjct: 301 RGQAH 305 >UniRef50_D0J5H4 Hypothetical conserved protein n=2 Tax=Comamonas testosteroni RepID=D0J5H4_COMTE Length = 339 Score = 326 bits (835), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 174/333 (52%), Positives = 229/333 (68%), Gaps = 36/333 (10%) Query: 3 LAGSSLLTLLDDIATLLDDISVMGKLAA------------------KKTAGVLGDDLSLN 44 +AG+ LL LLDDIA+LLDD+++M K AA +KTAGVLGDDL+LN Sbjct: 1 MAGAGLLMLLDDIASLLDDVALMTKTAAGKSTAILDDVATQTKVAVQKTAGVLGDDLALN 60 Query: 45 AQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEG 104 A+QV+GV+ANRELPVVW VAKGSL+NK ILVP AL+ISAF+PW ITPLLM+GGAFLCFEG Sbjct: 61 AEQVTGVKANRELPVVWAVAKGSLMNKAILVPAALLISAFVPWLITPLLMVGGAFLCFEG 120 Query: 105 VEKVLHMLEARKHKEDPAQ----------------SQQRLEKLAAQDPLKFEKDKIKGAI 148 VEK+L + KH++ A S R + DP+++EK K+KGA+ Sbjct: 121 VEKILELF--HKHQKHDAHDAVVDAEEAAHKGVAPSSVRAAREKQMDPMEYEKQKVKGAV 178 Query: 149 RTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAE 208 RTDFILSAEI+AI LG V+ P+ Q VL +AL +TV VYGLV IV++DD+G WL Sbjct: 179 RTDFILSAEIMAIALGTVSAKPIWEQASVLIAVALAITVFVYGLVAGIVRMDDVGGWLMA 238 Query: 209 KSSALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSA 268 KSS+ +A+G+GL+ PWLM+ LSIVGT AMF+VGG ++VHGI P+ H IE Sbjct: 239 KSSSAAKAMGRGLIAFTPWLMRGLSIVGTAAMFMVGGSLLVHGIEPVEHWIEQVIVPAGG 298 Query: 269 VVAMILPTVLNLILGFIIGGIVVLGVKAVEKMR 301 +VA + P ++++++G +IGG VV+ V+ K+R Sbjct: 299 IVAALGPVLVHVLVGAVIGGAVVVCVELWHKLR 331 >UniRef50_B1KFT3 Putative uncharacterized protein n=4 Tax=Proteobacteria RepID=B1KFT3_SHEWM Length = 311 Score = 320 bits (821), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 176/316 (55%), Positives = 227/316 (71%), Gaps = 18/316 (5%) Query: 3 LAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWG 62 +AG+SLLTLLDDIA +LDD+++M K+AAKKTAGVLGDDL+LNAQQVSGV A+RELPVVW Sbjct: 1 MAGASLLTLLDDIAAILDDVALMSKVAAKKTAGVLGDDLALNAQQVSGVSADRELPVVWA 60 Query: 63 VAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEAR--KHKED 120 VA GSL NK ILVP AL+ISAFIP AITPLLM GG FLCFEG EK+ H KH E Sbjct: 61 VAIGSLKNKCILVPAALLISAFIPQAITPLLMFGGLFLCFEGFEKLYHSYTHHRVKHSEG 120 Query: 121 PAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSG 180 + + ++ LAA +EK+KIKGAIRTDF+LSAEI+AITLG+VAEA QV+ LS Sbjct: 121 EEGAVRLVDDLAA-----YEKEKIKGAIRTDFVLSAEIIAITLGVVAEASFSTQVVTLSA 175 Query: 181 IALVVTVGVYGLVGVIVKIDDLGYWLAEKS-----SALMQALGKGLLIIAPWLMKALSIV 235 IAL++T+GVYGLV IVK+DDLG +L + + + G GL+ AP+LMK L++V Sbjct: 176 IALMMTIGVYGLVAGIVKLDDLGLYLNRREGPGLFTRFGRWFGGGLVNAAPYLMKGLTVV 235 Query: 236 GTLAMFLVGGGIVVHGIAPLHHAIEHFA---GQQSAV---VAMILPTVLNLILGFIIGGI 289 GT+AMF+VGGGI+ HG+ + I H A G+ S V ++ I P++LN + G + G + Sbjct: 236 GTVAMFMVGGGILTHGLHVVSEHITHVATLVGELSVVGPTLSFITPSLLNTLFGIVAGAL 295 Query: 290 VVLGVKAVEKMRGQAH 305 + + V+K+RG + Sbjct: 296 ALALISMVQKIRGNTN 311 >UniRef50_C6AJU4 Inner membrane protein YedI n=20 Tax=Proteobacteria RepID=C6AJU4_AGGAN Length = 287 Score = 262 bits (670), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 147/260 (56%), Positives = 190/260 (73%), Gaps = 12/260 (4%) Query: 3 LAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWG 62 +A SSL TLLDDIA+LLDD+SVM K+AAKKT GV+GDDL+LNA QV+G A RELP+VW Sbjct: 1 MAFSSLFTLLDDIASLLDDVSVMTKVAAKKTVGVVGDDLALNANQVTGATAERELPIVWA 60 Query: 63 VAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPA 122 V KGSL+NK+IL+P+AL++SAF+P I PLLMIGGA+LCFEGVEK+LH H E P Sbjct: 61 VTKGSLVNKIILIPIALLLSAFLPALIVPLLMIGGAYLCFEGVEKILHKFFFAHHDE-PH 119 Query: 123 QSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIA 182 + + + EK KIKGAIRTDFILSAEI+ I LG +++A +L Q++ L I Sbjct: 120 EDNKPFD----------EKAKIKGAIRTDFILSAEIIIIALGELSDAEILTQIISLIIIG 169 Query: 183 LVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFL 242 L +T+ VYG+V +IVK DD G +L +K + + LGKG+L I P M++LS +GT+AMFL Sbjct: 170 LGITLVVYGIVALIVKADDFGVFLIKK-GGVAETLGKGILFIMPKFMRSLSFIGTIAMFL 228 Query: 243 VGGGIVVHGIAPLHHAIEHF 262 VGGGI VH + LHH + + Sbjct: 229 VGGGIFVHNVETLHHLLADY 248 >UniRef50_D0W1M0 Inner membrane protein YedI n=2 Tax=Proteobacteria RepID=D0W1M0_NEICI Length = 286 Score = 253 bits (646), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 139/256 (54%), Positives = 183/256 (71%), Gaps = 15/256 (5%) Query: 3 LAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWG 62 +A +SL TLLDDIA +LDD+++M K AAKKT GV+GDDL+LNA QV+G+ + RELP++W Sbjct: 1 MAFASLFTLLDDIAAVLDDVALMTKTAAKKTVGVVGDDLALNANQVAGISSERELPIIWA 60 Query: 63 VAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEAR--KHKED 120 VAKGSL NK+IL+P AL++S F+P AITPLL IGG +LCFEGVEK+LH R + + Sbjct: 61 VAKGSLFNKLILIPAALLLSTFLPQAITPLLTIGGIYLCFEGVEKLLHKFLHRNVNLEAE 120 Query: 121 PAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSG 180 A S+ E++KIKGAIRTDFILSAEI+ I LG V + LL + LV++ Sbjct: 121 TATSEN-------------EQEKIKGAIRTDFILSAEIIIIALGTVGQYGLLTRSLVMAA 167 Query: 181 IALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAM 240 I + +TV VYGLV VIVK+DDLG L ++ L++ G+ L+ PW M+ L+I GT+AM Sbjct: 168 IGIGMTVFVYGLVAVIVKLDDLGILLMKRPQNLLRRTGRTLISFMPWFMRGLAIAGTIAM 227 Query: 241 FLVGGGIVVHGIAPLH 256 FLVGGG+V H + LH Sbjct: 228 FLVGGGLVSHNLGFLH 243 >UniRef50_A0M4Q9 Membrane protein containing DUF808 n=17 Tax=Bacteria RepID=A0M4Q9_GRAFK Length = 291 Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 136/301 (45%), Positives = 203/301 (67%), Gaps = 16/301 (5%) Query: 5 GSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWGVA 64 S LLDDIA L+DD+SVM K+A KKTAG+LGDDL++NA++ SG ++RELPV+W + Sbjct: 2 ASGFFALLDDIAALMDDVSVMTKVAGKKTAGLLGDDLAVNAEKASGFMSSRELPVLWAIT 61 Query: 65 KGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPAQS 124 KGSL+NK I++P+A ++SAF+P AIT +L+IGG +L +EG EK+ H P++ Sbjct: 62 KGSLLNKAIILPVAFLLSAFVPTAITIILLIGGLYLAYEGAEKIYEYFFPHAH---PSE- 117 Query: 125 QQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIALV 184 + LE+L ++ L+ EK+KIK AI TDFILS EIV I LG V++ L Q++V++ IAL+ Sbjct: 118 KPVLEELTKEEALEREKEKIKSAILTDFILSIEIVIIALGAVSQEILSTQIIVVTIIALI 177 Query: 185 VTVGVYGLVGVIVKIDDLG---YWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMF 241 TVGVYG+V +IV++D+ G L E+ + +GK L+ PW++K+LS++GT+A+ Sbjct: 178 ATVGVYGVVALIVRMDEFGAKLINLNEQEDSFSDKVGKFLVRALPWVIKSLSVIGTIALM 237 Query: 242 LVGGGIVVHGIAPLHHAIEHF-AGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVEKM 300 LV GGI H I HF G ++ ++I+ V+ L++G I+ +V LG K + + Sbjct: 238 LVSGGIFTHSI--------HFLDGLFESIPSIIVEFVIGLVVGIIMVLLVNLGKKIWKAV 289 Query: 301 R 301 R Sbjct: 290 R 290 >UniRef50_A5P853 Putative uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P853_9SPHN Length = 318 Score = 200 bits (509), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 127/304 (41%), Positives = 180/304 (59%), Gaps = 43/304 (14%) Query: 18 LLDDISVMGKL--------------AAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWGV 63 LLDD+S++ + A KTAGV+ DD ++ V+G+ RELP++W + Sbjct: 8 LLDDVSIIARTAAASVDDVAAAAGRAGSKTAGVIIDDAAVTPSYVTGLSPARELPIIWAI 67 Query: 64 AKGSLINKVI-LVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPA 122 KGS NK+I L+P AL++S F+P AI +LM+GGAFL +EG EKV+ L KH Sbjct: 68 TKGSFKNKLIFLLPGALLLSEFLPSAIILILMLGGAFLSYEGAEKVMEKLGGEKHG---- 123 Query: 123 QSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQV----LVL 178 + +E + QDP+ FEK ++ GAIRTD ILSAEI+AI L ++ ++ L L Sbjct: 124 ---KTVEDVI-QDPVAFEKQRVAGAIRTDLILSAEIMAIVLNELSSETIVETFWQRGLAL 179 Query: 179 SGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTL 238 + +A+ VTV VYG V +IVK+DD+G L +KSSA QA+G+ LL PWL+K LS VGT+ Sbjct: 180 ALVAIAVTVVVYGSVALIVKMDDVGLHLTKKSSATAQAIGRALLKGMPWLLKTLSFVGTI 239 Query: 239 AMFLVGGGIVVHGIAPL------------HHAIEHFAGQQSAVVAMI----LPTVLNLIL 282 AM VGGGIVVHG L +A+++ G S + + + ++ L L Sbjct: 240 AMLWVGGGIVVHGTHELGFDLFYDIAHGAEYAVQNATGALSGLAGWVTYAGISALIGLAL 299 Query: 283 GFII 286 GF+I Sbjct: 300 GFVI 303 >UniRef50_A8EUP4 Conserved hypothetical membrane protein (DUF808) n=2 Tax=Campylobacterales RepID=A8EUP4_ARCB4 Length = 368 Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 122/353 (34%), Positives = 185/353 (52%), Gaps = 68/353 (19%) Query: 1 MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSL----------------- 43 M SL T LDDI L DDI+ KLA+ K++G+L DDL+ Sbjct: 23 MATTAKSLATSLDDIGLLFDDIATYTKLASIKSSGLLVDDLAAIANFTNETTSEILKKEL 82 Query: 44 -NAQQVSGVRAN---------------------------------RELPVVWGVAKGSLI 69 A+ V + N RELP+V+ +AKGS I Sbjct: 83 EKAKSVEEFQENIKKLDTKTQQEIILELEHIRNVAMLEAKRKAALRELPIVYKIAKGSFI 142 Query: 70 NKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLH-MLEARKHKEDPAQSQQRL 128 NK I++P+ L++S PWAI P+L+IGGA+L +EGVE +L +H ED + + Sbjct: 143 NKFIIIPIVLLLSYLAPWAIAPILIIGGAYLAYEGVESILEKFFHHEEHNEDNNKKEISN 202 Query: 129 EKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIALVVTVG 188 E FE +K+K A++TDFILS EI+ I+L ++ + L ++ VL + ++ T+ Sbjct: 203 EN--------FEDEKVKSAVKTDFILSFEIIVISLSLLDNSDFLTKLFVLISVGILTTIF 254 Query: 189 VYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIV 248 VYG+V I+K+DD+G++L EK S ++Q +G G + P+++K + ++GT+AM VGGGI+ Sbjct: 255 VYGIVAFIIKLDDIGFYLQEKRSEILQKIGDGFVKAMPYIIKVIGVLGTIAMLAVGGGII 314 Query: 249 VHGIAPLHHAIEHFAGQQSAV-VAMILPTVLNLILGFIIGGIVVLGVKAVEKM 300 H H + F+ AV + +L LG I+G IVVL V K+ Sbjct: 315 AHET----HILSSFSETLKAVPLGGFFSEIL---LGAIVGYIVVLVVPIFSKV 360 >UniRef50_B8H5Q0 Conserved membrane spanning protein n=64 Tax=Bacteria RepID=B8H5Q0_CAUCN Length = 314 Score = 191 bits (485), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 130/304 (42%), Positives = 181/304 (59%), Gaps = 27/304 (8%) Query: 6 SSLLTLLDDIATL-------LDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELP 58 S L LLDD+A + LDD+ A K GV+ DD ++ G +RELP Sbjct: 3 SGLAALLDDVAAITKLAAASLDDVGAAAGKAGTKAVGVVVDDAAVTPGYAIGFTPDRELP 62 Query: 59 VVWGVAKGSLINKVI-LVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKH 117 +VW +A GSL NK+I L+P ALI+SAF PWA+TP+LM+GGA+L FE EKVL Sbjct: 63 IVWKIAMGSLRNKLIFLLPGALILSAFAPWAVTPILMLGGAYLAFEATEKVLEAF----- 117 Query: 118 KEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLV 177 P + +E+LA P EK K+ GAIRTD ILS EI+AI L VA L Q Sbjct: 118 --TPEAEGEAIEELALSGP-DLEKQKVDGAIRTDLILSGEIMAIALAEVAHLSLAMQAGA 174 Query: 178 LSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGT 237 L+ + +++TVGVYG V +IVK+DD+G L+ + + QALG+GL+ P M+AL+++GT Sbjct: 175 LALVGVLLTVGVYGAVALIVKMDDIGLHLSRRPNKGSQALGRGLVKAMPVTMEALTVIGT 234 Query: 238 LAMFLVGGGIVVHG-----IAPLHHAIE---HFAGQQ---SAVVAMILPTVLNLILGFII 286 AM VGGGI+VHG + P+ H +E H+AGQ V + + + ++G +I Sbjct: 235 AAMLWVGGGIIVHGLEHFHLTPIPHWVEGLSHWAGQAPVVGPVTGWLAFALGSAVVGLVI 294 Query: 287 GGIV 290 GG++ Sbjct: 295 GGVL 298 >UniRef50_B2SBI3 Tetracycline resistance protein n=34 Tax=Brucella RepID=B2SBI3_BRUA1 Length = 318 Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 112/270 (41%), Positives = 166/270 (61%), Gaps = 24/270 (8%) Query: 6 SSLLTLLDDIATL-------LDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELP 58 S L LLD+IA + LDD++ A+ K AG++ DD ++ + V G+ RELP Sbjct: 8 SGLFALLDNIAAIAKMAAASLDDVAGQTAKASAKAAGIVIDDTAVTPKYVVGLTPERELP 67 Query: 59 VVWGVAKGSLINKVI-LVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHML---EA 114 V+W + KGSL NK+I L+P+AL++ F P I PLLM+GG +L FEG EK++ + Sbjct: 68 VIWKITKGSLRNKLIFLLPIALVLGYFAPDFIMPLLMLGGIYLAFEGTEKLVEFFLPHDE 127 Query: 115 RKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQ 174 +H E S + +E + GAIRTDFILSAEI+A+TL + + + Q Sbjct: 128 EEHSETQGNSAREIEA-----------STVAGAIRTDFILSAEIMALTLAGLPPSSIFTQ 176 Query: 175 VLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKS-SALMQALGKGLLIIAPWLMKALS 233 ++L+ + +++T VYG+VG+IVK+DD+G L S +++ + LGKGL+ P L++ LS Sbjct: 177 AIILAAVGILITFAVYGVVGIIVKLDDMGASLFMHSHTSVGRKLGKGLVGAMPVLLETLS 236 Query: 234 IVGTLAMFLVGGGIVVHGIAPL-HHAIEHF 262 VGT+AM VGG I+VHG+A L H +E F Sbjct: 237 SVGTIAMLWVGGSIIVHGLASLGFHTVEEF 266 >UniRef50_D2QIJ1 Putative uncharacterized protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QIJ1_9SPHI Length = 305 Score = 183 bits (464), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 108/268 (40%), Positives = 158/268 (58%), Gaps = 19/268 (7%) Query: 6 SSLLTLLDDIATL-------LDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELP 58 S LLDDI+ L LDD+ K +G++ DD ++ + V G+ +REL Sbjct: 3 SGFFALLDDISALVKASAASLDDVPTQVAKTTGKVSGIVIDDTAVTPKYVVGLDPSRELA 62 Query: 59 VVWGVAKGSLINKVILV-PLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKH 117 +++ +AK SLINK++L+ P ALI+ F PWAITP+LM+GGA+LCFEG EKV + H Sbjct: 63 IIYQIAKKSLINKLLLLSPAALILGYFAPWAITPILMVGGAYLCFEGYEKVHSLFS--HH 120 Query: 118 KEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLV 177 D + E++ P + EK+++ A+RTD ILSAEI+AI V ++NQ++V Sbjct: 121 DGDTNR-----EQVKEITPEELEKERVGSAVRTDIILSAEIIAIAYSQVTGQAIVNQIVV 175 Query: 178 LSGIALVVTVGVYGLVGVIVKIDDLGYWLA-EKSSALMQALGKGLLIIAPWLMKALSIVG 236 + +A+ +TV VYG VG++VK DD+G LA K +Q +G+ ++ P + L VG Sbjct: 176 MVAVAIFITVAVYGFVGLLVKADDIGLHLAGNKYPPAIQKIGRSVVKFMPHFLSWLGYVG 235 Query: 237 TLAMFLVGGGIVVHGI---APLHHAIEH 261 T AM VG I+ HGI A L H +E Sbjct: 236 TAAMLWVGAEIIAHGIPFTAHLLHELEQ 263 >UniRef50_C7NKD3 Uncharacterized conserved protein n=2 Tax=Actinomycetales RepID=C7NKD3_KYTSD Length = 366 Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 114/276 (41%), Positives = 168/276 (60%), Gaps = 23/276 (8%) Query: 29 AAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFIPWA 88 A+ K AGV+ DD ++ Q + G NRELP++W +AKGSL NK I+VP+ L++S F PW Sbjct: 33 ASTKAAGVVVDDAAVTPQYLEGAEPNRELPMIWRIAKGSLRNKAIIVPVLLLLSQFAPWI 92 Query: 89 ITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAI 148 +TPLLM+GG +LCFEG EKV + H +D + +R E QD E+ +K AI Sbjct: 93 LTPLLMLGGTYLCFEGAEKVWEKISG--HGDDGKAADERSE----QD----EEQVVKSAI 142 Query: 149 RTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAE 208 TDF+LS EI+ I+L V + LL++ L+L +AL++TV VYG V +IVK+DD+G LA+ Sbjct: 143 TTDFVLSCEILVISLNEVTDQSLLSRGLILVVVALLMTVVVYGAVALIVKMDDVGLHLAK 202 Query: 209 KSS--ALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGI------APL---HH 257 K+ + LG+G++ P ++ + VG LAM VGG I++ GI AP HH Sbjct: 203 KNDEGSAGHKLGRGMVKAMPTVLDIIGFVGMLAMLWVGGHIIMVGIDEYGLSAPYDLAHH 262 Query: 258 AIEHFAGQQ--SAVVAMILPTVLNLILGFIIGGIVV 291 + AG ++A + T++ + LG + G I+V Sbjct: 263 LADMVAGTPVIGGLLAWLADTLVAMALGLVWGAIIV 298 >UniRef50_B8IG37 Putative uncharacterized protein n=5 Tax=Rhizobiales RepID=B8IG37_METNO Length = 345 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 114/268 (42%), Positives = 156/268 (58%), Gaps = 37/268 (13%) Query: 35 GVLGDDLSLNAQQVSGVRANRELPVVWGVAKGSLINKVI-LVPLALIISAFIPWAITPLL 93 GV+ DD ++ + V G+ A+RELP++ +A GSL NK++ L+P AL +S PW +TPLL Sbjct: 39 GVVIDDTAVTPRYVVGLSASRELPIIGKIALGSLKNKLLFLLPGALALSFLAPWLLTPLL 98 Query: 94 MIGGAFLCFEGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFI 153 MIGGA+LCFEG EKV L A + E +DP E +K++ I+TDFI Sbjct: 99 MIGGAYLCFEGAEKVHEALWPH------AAHAEEAEDPVPRDPKALEDEKVRSTIKTDFI 152 Query: 154 LSAEIVAITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSA- 212 LSAEI+A+TL V+EA L Q+ VL+ + + +T VYG+V +IVK DD+G LA +S Sbjct: 153 LSAEIMALTLATVSEARLGTQIFVLAAVGIGITALVYGVVALIVKADDVGLALARESRPA 212 Query: 213 -----------------------LMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVV 249 L + LG+G++ P L++ L IVGT AM VGGGI+V Sbjct: 213 SSLLGLRVPPRPSATPADRALALLTRGLGRGMVRGMPVLLRGLGIVGTAAMIWVGGGIIV 272 Query: 250 H-----GIAPLHHAIEHFA-GQQSAVVA 271 H G+A + HAIEH A G AV A Sbjct: 273 HGLESFGLAAIGHAIEHAAQGAADAVPA 300 >UniRef50_C7R5J1 Putative uncharacterized protein n=3 Tax=Actinomycetales RepID=C7R5J1_JONDD Length = 313 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 122/318 (38%), Positives = 183/318 (57%), Gaps = 30/318 (9%) Query: 6 SSLLTLLDDIATL-------LDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELP 58 S L LLDDIA L LDD+S A+ K+AGV+ DD ++ Q V GV REL Sbjct: 3 SGFLALLDDIAVLARAAASSLDDLSAAAMKASAKSAGVVIDDAAVTPQYVQGVSPKRELH 62 Query: 59 VVWGVAKGSLINK-VILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKH 117 V+ + GSL NK +I++P A+I + + PW + LL++GGA+L FEG EKVL H Sbjct: 63 VIKRITLGSLRNKFLIILPAAMIFTTWAPWILPILLIVGGAYLTFEGAEKVLGWFGVHLH 122 Query: 118 KEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLV 177 E + +++P +FE ++GA+RTD ILS EI+ ITL V +++++V Sbjct: 123 GEKETLTT-------SENPDEFENTLVRGAVRTDLILSTEIMLITLSNVDVDGFVDRLIV 175 Query: 178 LSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGT 237 L +ALV+T VYG V V+VK+DD+G LA + + A+G+GL+ + P + ALSI+GT Sbjct: 176 LIIVALVMTAVVYGAVAVLVKMDDIGLVLARSRADAVGAVGRGLVAVMPKVFTALSIIGT 235 Query: 238 LAMFLVGGGIVVHGIAPL------------HHAIEHFAGQQSAVVAMILPTVLNLILGFI 285 +AM VGG I+ ++ L HA+E + G AV A + T+ + + G + Sbjct: 236 VAMLWVGGHILTASMSDLGFSLFYDIAHDVAHAVEPWGG---AVGAWVADTLYSAVFGVL 292 Query: 286 IGGIVVLGVKAVEKMRGQ 303 +G ++V V V K+R + Sbjct: 293 VGLLIVAVVAGVGKLRHR 310 >UniRef50_B8R4L5 Putative ABC transport system membrane protein n=1 Tax=Arthrobacter globiformis RepID=B8R4L5_ARTGO Length = 311 Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 112/277 (40%), Positives = 154/277 (55%), Gaps = 24/277 (8%) Query: 18 LLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWGVAKGSLINK-VILVP 76 ++DDI A+ KTAGV+ DD ++ Q V G+ RELPVVW +A GSL+NK VI++P Sbjct: 8 VVDDILTAALKASAKTAGVVIDDAAVTPQYVQGITPARELPVVWKIALGSLVNKFVIIIP 67 Query: 77 LALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDP 136 +AL+++AF PW + LL+IGG FLCFEG EKVL A ED D Sbjct: 68 IALLLTAFAPWVLPYLLIIGGGFLCFEGAEKVLEWFGAHHESED--------------DG 113 Query: 137 LKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVL-VLSGIALVVTVGVYGLVGV 195 + EK + GAIRTD ILS EI+ I L + L L L+ I L +T VYG V + Sbjct: 114 PRDEKKLVFGAIRTDLILSTEIMLIALTSLDPGFGLGMTLGALAVIGLGMTALVYGAVAL 173 Query: 196 IVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVV------ 249 +VKIDD+G L + S ++ G ++ P + + +S+VGT+AM VGG +V+ Sbjct: 174 LVKIDDIGLRLMKSPSRGIRRAGARVVASMPAVFRVISVVGTVAMLWVGGHLVIANLAET 233 Query: 250 --HGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGF 284 HG L HA+ H VV I+ T L+ + G Sbjct: 234 FWHGPYDLVHAVTHLVEAAGPVVVWIVDTALSAVFGL 270 >UniRef50_B6IVS2 Inner membrane protein, putative n=3 Tax=Alphaproteobacteria RepID=B6IVS2_RHOCS Length = 366 Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 111/288 (38%), Positives = 156/288 (54%), Gaps = 47/288 (16%) Query: 6 SSLLTLLDDI-------ATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELP 58 + L+ LLDD+ A +DD + A K AGV+ DD ++ + V+G A RELP Sbjct: 3 TGLIALLDDVVGLAKVAAASIDDAAGQASRAGAKAAGVVVDDAAVTPRYVTGFSAERELP 62 Query: 59 VVWGVAKGSLINKVILVPLALIISAFI-PWAITPLLMIGGAFLCFEGVEKVLHMLEARKH 117 ++ + GSL NK++ + ++ + + PWAITPLLM+GGAFLC+EG EKV + Sbjct: 63 IIGRITVGSLKNKLLYLLPLALLLSLVAPWAITPLLMLGGAFLCYEGAEKVYEAVWPHAV 122 Query: 118 KEDPAQSQQRLEKLAA--QDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAE--APLLN 173 P + +AA QD E++K+ GAI+TDFILSAEI+AITL VAE + Sbjct: 123 THGPGGA------VAATIQDARALEEEKVSGAIKTDFILSAEIMAITLSTVAEETSSFWG 176 Query: 174 QVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKS----------------------- 210 Q VL+ + + +T+ VYG V +IVK DD+G LA Sbjct: 177 QAAVLAIVGIGITLAVYGTVALIVKADDVGLALARNPRPVSTLLGLRRAAAADPTATDPT 236 Query: 211 ------SALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGI 252 + L Q LG+GL+ P +K L +VGT AM VGGGIV+HG+ Sbjct: 237 GADRALAGLTQGLGRGLVRFMPVFLKLLGLVGTAAMLWVGGGIVLHGL 284 >UniRef50_C8NMU2 Membrane protein n=36 Tax=Bacteria RepID=C8NMU2_COREF Length = 322 Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 114/288 (39%), Positives = 168/288 (58%), Gaps = 22/288 (7%) Query: 32 KTAGVLGDDLSLNAQQVSGVRANRELPVVWGVAKGSLINKVILVPLALII-SAFIPWAIT 90 K AGV+ DD ++ Q V GV+ RELP++W +AKGSL+NK+I++ ++ S+F PWA+T Sbjct: 36 KAAGVVVDDAAVTPQYVDGVKPARELPMIWRIAKGSLVNKIIIILPIALLLSSFAPWALT 95 Query: 91 PLLMIGGAFLCFEGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRT 150 P+LM+GG +LCFEG EK+ H + R H ED + +Q K E +KGAI T Sbjct: 96 PILMLGGTYLCFEGAEKIWHSIHTRMHHEDKPMVPK------SQAGPKSEDALVKGAITT 149 Query: 151 DFILSAEIVAITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLA--E 208 D ILSAEI+ I+L + + Q L + + +T VYG+V ++VK+DD+G +A E Sbjct: 150 DLILSAEIMVISLNEITAETIWMQAATLFVVGVGITALVYGVVALLVKMDDMGLAVATRE 209 Query: 209 KSSALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLH--------HAIE 260 +SA G+GL+ P +++ +S++G AM VGG I+V G+ L H +E Sbjct: 210 GASAGAVRFGRGLVKAMPIILQIISVIGVFAMLWVGGHIMVVGLDELGWHLPYGLVHGLE 269 Query: 261 HFAGQQSAVVAMIL-PTVLNLILGFIIGGIVVLGVKAVEKM----RGQ 303 FA + A L TV +L G + G +VV+ V AV KM RG+ Sbjct: 270 EFAAGAAGGFAGWLGNTVGSLAFGAVWGALVVIIVTAVGKMINRSRGE 317 >UniRef50_C6S5Y4 Putative uncharacterized protein n=5 Tax=Neisseria meningitidis RepID=C6S5Y4_NEIML Length = 276 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 72/119 (60%), Positives = 91/119 (76%), Gaps = 3/119 (2%) Query: 2 LLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVW 61 L+A +SL TL DDI +LDD+++M K AAKKTAGV+GDDL+ NA +V+GV A RELP+VW Sbjct: 25 LMAFASLFTLPDDITAVLDDVALMTKAAAKKTAGVVGDDLAPNANRVTGVSAERELPIVW 84 Query: 62 GVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKED 120 +AKGS NK +LVP AL++SAF+P ITPLL GG +LCFEGVEK+LH H+ D Sbjct: 85 SMAKGSFSNKPVLVPAALLLSAFLPQLITPLLTAGGIYLCFEGVEKLLHKF---LHRHD 140 >UniRef50_B8HHA1 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B8HHA1_ARTCA Length = 351 Score = 143 bits (360), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 107/266 (40%), Positives = 160/266 (60%), Gaps = 20/266 (7%) Query: 39 DDLSLNAQQVSGVRANRELPVVWGVAKGSLINKVILVPLALII-SAFIPWAITPLLMIGG 97 DD ++ Q VSG +RELP++ + GSL NK++++ AL++ SAFIPW I +LM+GG Sbjct: 43 DDAAVTPQYVSGADPSRELPMIKKIFWGSLRNKLLIILPALLLISAFIPWIIPFILMLGG 102 Query: 98 AFLCFEGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAE 157 +LC+EG EKV H L ++ + + R E +KGAI TDFILS E Sbjct: 103 TYLCYEGAEKVWHKLRGHHSADEDSPAVDRGPDA--------ESKVVKGAITTDFILSCE 154 Query: 158 IVAITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQAL 217 I+ I + V +A L + L+L +A+V+TV VYG V +IVK+DD+G LA K SA Q Sbjct: 155 IMVIAMNEVPDASLWVRALILVVVAVVITVAVYGAVALIVKMDDVGMHLAAKDSAGSQRF 214 Query: 218 GKGLLIIAPWLMKALSIVGTLAMFLVGGGIVV--------HGIAPLHHAIEH-FAGQQS- 267 G+ L+ P ++ A++ +GT+AM VGG I++ H + L HA+EH FAG + Sbjct: 215 GELLVRGMPKVLGAITFIGTIAMLWVGGHIMLQGTHDLGWHTLYDLVHALEHPFAGIAAV 274 Query: 268 -AVVAMILPTVLNLILGFIIGGIVVL 292 +A ++ T+ + ++GFI G IV+L Sbjct: 275 GGFLAWLVNTLCSAVIGFIWGTIVML 300 >UniRef50_C7MEM6 Uncharacterized conserved protein n=28 Tax=Bacteria RepID=C7MEM6_BRAFD Length = 317 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 100/269 (37%), Positives = 159/269 (59%), Gaps = 24/269 (8%) Query: 35 GVLGDDLSLNAQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFI-PWAITPLL 93 GV+ DD ++ Q V G+ RELP++W +AKGSL NK++++ L++ + I PW +TP+L Sbjct: 39 GVVIDDAAVTPQYVRGIEPRRELPIIWRIAKGSLRNKLLIILPVLLLLSVIAPWLLTPIL 98 Query: 94 MIGGAFLCFEGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFI 153 M+GG +L FEG EK+ ++ + P S A+D + + GA+RTD I Sbjct: 99 MLGGLYLSFEGAEKIGELV-----RGAPTTSPVTAAGGDAEDRI------VSGAVRTDLI 147 Query: 154 LSAEIVAITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKS-SA 212 LSAEI+ I++ V L + VL +AL +T VYG VG++VK+DD+G ++ + SA Sbjct: 148 LSAEIMVISMDAVDATSLWIRTAVLLVVALAITALVYGAVGLLVKMDDIGVSMSSREGSA 207 Query: 213 LMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLH--------HAIEHFAG 264 L Q +G+GL+ P +M +S+VG +AM VGG I++ G L H +E A Sbjct: 208 LAQRIGRGLVRSMPRVMDVISVVGMIAMLWVGGHILLVGTHELGLAQPYGLVHRLEGLAA 267 Query: 265 QQSAVVAM---ILPTVLNLILGFIIGGIV 290 + V A+ ++ TV +L++G ++GG+V Sbjct: 268 GVAGVGAVLAWLVNTVFSLVIGVLLGGVV 296 >UniRef50_Q9ZAK8 Putative uncharacterized protein mutK n=1 Tax=Vibrio cholerae RepID=Q9ZAK8_VIBCH Length = 163 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 93/138 (67%), Gaps = 4/138 (2%) Query: 171 LLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAE--KSSALMQALGKGLLIIAPWL 228 +L Q+LV+S IA+++T+GVYGLV IVK+DDLG++L K L +LG L+ AP L Sbjct: 1 MLTQILVVSLIAVIMTIGVYGLVAGIVKLDDLGFYLQRPSKGQGLKASLGGVLVRFAPKL 60 Query: 229 MKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSA--VVAMILPTVLNLILGFII 286 MK L++VGT A+FLVGGGIVVH + +HH +E A VV ++PT++N ++G + Sbjct: 61 MKGLTVVGTAAIFLVGGGIVVHNVPAVHHILEPMLDVLHAWPVVGTLMPTLINGVIGVMA 120 Query: 287 GGIVVLGVKAVEKMRGQA 304 G +++ ++ K+RG + Sbjct: 121 GSLLITVMEVWHKIRGNS 138 >UniRef50_UPI000050FF39 hypothetical protein BlinB_11411 n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FF39 Length = 273 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 101/186 (54%), Gaps = 15/186 (8%) Query: 116 KHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQV 175 +H E+P + + +K EK ++ AI TDF+LS EI+ I L VA L+ + Sbjct: 18 EHHEEPKKESKHGKKGDGD----AEKKIVRSAITTDFVLSCEIMVIALNEVASEDLIPRA 73 Query: 176 LVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIV 235 ++L +AL +T+GVYG V +IVK+DD+G +A+K A Q G+ L+ P L+ LS++ Sbjct: 74 IILVVVALAITIGVYGSVALIVKMDDIGLHMAQKEKASTQKFGRFLVKAMPKLLGGLSVI 133 Query: 236 GTLAMFLVGGGIVVHGIAPL-HHAIEHFAGQQSAVVAMI----------LPTVLNLILGF 284 GT AM VGG I++ G L HA+ F VA I + T +LILG Sbjct: 134 GTFAMLWVGGHIILVGTDELGFHALYDFVHHLEEPVAAIAGVGGILGWLVNTFFSLILGA 193 Query: 285 IIGGIV 290 GGIV Sbjct: 194 AWGGIV 199 >UniRef50_B3SFI5 Putative uncharacterized protein n=2 Tax=cellular organisms RepID=B3SFI5_TRIAD Length = 173 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 5/63 (7%) Query: 199 IDDLGYWLAEKS-----SALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIA 253 +DD+G ++ KS + L + +G+ LL+ AP LMK L++VGT+AMFLVGGGI+ H I Sbjct: 1 MDDVGLYMLRKSLTGSMNTLQRFIGRALLVAAPALMKTLAVVGTVAMFLVGGGILTHSIG 60 Query: 254 PLH 256 LH Sbjct: 61 FLH 63 >UniRef50_UPI0001AF2FA6 hypothetical protein Psyrpo1_12001 n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF2FA6 Length = 89 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 3/88 (3%) Query: 221 LLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVV---AMILPTV 277 +L +AP LMK LSIVGT AMF+VGGGI+VHG+ +HH +E V ++++PT+ Sbjct: 1 MLWLAPVLMKVLSIVGTAAMFMVGGGILVHGLPFVHHWVEGVTEAAEGAVGGLSLVVPTL 60 Query: 278 LNLILGFIIGGIVVLGVKAVEKMRGQAH 305 ++ + G I G ++VL V + K+ A Sbjct: 61 IDAVAGIIAGAVLVLVVTLIGKLWKAAR 88 >UniRef50_Q6LGY0 Putative uncharacterized protein SF2002 n=1 Tax=Photobacterium profundum RepID=Q6LGY0_PHOPR Length = 107 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 4/77 (5%) Query: 206 LAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQ 265 L + L L L+ AP+LMK L++VGT+AMFLVGGGIVVH + P H I H + Sbjct: 10 LGDAECRLYNHLYDFLVNPAPYLMKILAVVGTMAMFLVGGGIVVHSV-PNSHDIVHAITE 68 Query: 266 QSAVVA---MILPTVLN 279 A + +I PT+ N Sbjct: 69 SVATIPTADVIAPTLFN 85 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P46125 Inner membrane protein yedI n=318 Tax=Bacteria R... 362 8e-99 UniRef50_D0J5H4 Hypothetical conserved protein n=2 Tax=Comamonas... 335 2e-90 UniRef50_B1KFT3 Putative uncharacterized protein n=4 Tax=Proteob... 324 2e-87 UniRef50_C7NKD3 Uncharacterized conserved protein n=2 Tax=Actino... 302 1e-80 UniRef50_D0W1M0 Inner membrane protein YedI n=2 Tax=Proteobacter... 299 9e-80 UniRef50_A0M4Q9 Membrane protein containing DUF808 n=17 Tax=Bact... 298 2e-79 UniRef50_D2QIJ1 Putative uncharacterized protein n=1 Tax=Spiroso... 290 4e-77 UniRef50_C6AJU4 Inner membrane protein YedI n=20 Tax=Proteobacte... 285 2e-75 UniRef50_C7R5J1 Putative uncharacterized protein n=3 Tax=Actinom... 279 7e-74 UniRef50_A8EUP4 Conserved hypothetical membrane protein (DUF808)... 279 1e-73 UniRef50_B2SBI3 Tetracycline resistance protein n=34 Tax=Brucell... 276 5e-73 UniRef50_C8NMU2 Membrane protein n=36 Tax=Bacteria RepID=C8NMU2_... 276 9e-73 UniRef50_B8R4L5 Putative ABC transport system membrane protein n... 274 3e-72 UniRef50_B8H5Q0 Conserved membrane spanning protein n=64 Tax=Bac... 272 8e-72 UniRef50_A5P853 Putative uncharacterized protein n=1 Tax=Erythro... 271 2e-71 UniRef50_B8HHA1 Putative uncharacterized protein n=2 Tax=Bacteri... 266 5e-70 UniRef50_B8IG37 Putative uncharacterized protein n=5 Tax=Rhizobi... 251 2e-65 UniRef50_B6IVS2 Inner membrane protein, putative n=3 Tax=Alphapr... 249 8e-65 UniRef50_C7MEM6 Uncharacterized conserved protein n=28 Tax=Bacte... 236 1e-60 UniRef50_UPI000050FF39 hypothetical protein BlinB_11411 n=1 Tax=... 191 2e-47 UniRef50_C6S5Y4 Putative uncharacterized protein n=5 Tax=Neisser... 187 3e-46 UniRef50_Q9ZAK8 Putative uncharacterized protein mutK n=1 Tax=Vi... 126 1e-27 UniRef50_UPI0001AF2FA6 hypothetical protein Psyrpo1_12001 n=1 Ta... 75 4e-12 UniRef50_B3SFI5 Putative uncharacterized protein n=2 Tax=cellula... 73 1e-11 UniRef50_Q6LGY0 Putative uncharacterized protein SF2002 n=1 Tax=... 72 2e-11 Sequences not found previously or not previously below threshold: CONVERGED! >UniRef50_P46125 Inner membrane protein yedI n=318 Tax=Bacteria RepID=YEDI_ECOLI Length = 305 Score = 362 bits (930), Expect = 8e-99, Method: Composition-based stats. Identities = 305/305 (100%), Positives = 305/305 (100%) Query: 1 MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVV 60 MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVV Sbjct: 1 MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVV 60 Query: 61 WGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKED 120 WGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKED Sbjct: 61 WGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKED 120 Query: 121 PAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSG 180 PAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSG Sbjct: 121 PAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSG 180 Query: 181 IALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAM 240 IALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAM Sbjct: 181 IALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAM 240 Query: 241 FLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVEKM 300 FLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVEKM Sbjct: 241 FLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVEKM 300 Query: 301 RGQAH 305 RGQAH Sbjct: 301 RGQAH 305 >UniRef50_D0J5H4 Hypothetical conserved protein n=2 Tax=Comamonas testosteroni RepID=D0J5H4_COMTE Length = 339 Score = 335 bits (858), Expect = 2e-90, Method: Composition-based stats. Identities = 172/331 (51%), Positives = 227/331 (68%), Gaps = 32/331 (9%) Query: 3 LAGSSLLTLLDDIATLLDDISVMGKLAA------------------KKTAGVLGDDLSLN 44 +AG+ LL LLDDIA+LLDD+++M K AA +KTAGVLGDDL+LN Sbjct: 1 MAGAGLLMLLDDIASLLDDVALMTKTAAGKSTAILDDVATQTKVAVQKTAGVLGDDLALN 60 Query: 45 AQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEG 104 A+QV+GV+ANRELPVVW VAKGSL+NK ILVP AL+ISAF+PW ITPLLM+GGAFLCFEG Sbjct: 61 AEQVTGVKANRELPVVWAVAKGSLMNKAILVPAALLISAFVPWLITPLLMVGGAFLCFEG 120 Query: 105 VEKVLHMLEARKHKE--------------DPAQSQQRLEKLAAQDPLKFEKDKIKGAIRT 150 VEK+L + + + A S R + DP+++EK K+KGA+RT Sbjct: 121 VEKILELFHKHQKHDAHDAVVDAEEAAHKGVAPSSVRAAREKQMDPMEYEKQKVKGAVRT 180 Query: 151 DFILSAEIVAITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKS 210 DFILSAEI+AI LG V+ P+ Q VL +AL +TV VYGLV IV++DD+G WL KS Sbjct: 181 DFILSAEIMAIALGTVSAKPIWEQASVLIAVALAITVFVYGLVAGIVRMDDVGGWLMAKS 240 Query: 211 SALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVV 270 S+ +A+G+GL+ PWLM+ LSIVGT AMF+VGG ++VHGI P+ H IE +V Sbjct: 241 SSAAKAMGRGLIAFTPWLMRGLSIVGTAAMFMVGGSLLVHGIEPVEHWIEQVIVPAGGIV 300 Query: 271 AMILPTVLNLILGFIIGGIVVLGVKAVEKMR 301 A + P ++++++G +IGG VV+ V+ K+R Sbjct: 301 AALGPVLVHVLVGAVIGGAVVVCVELWHKLR 331 >UniRef50_B1KFT3 Putative uncharacterized protein n=4 Tax=Proteobacteria RepID=B1KFT3_SHEWM Length = 311 Score = 324 bits (831), Expect = 2e-87, Method: Composition-based stats. Identities = 173/316 (54%), Positives = 223/316 (70%), Gaps = 18/316 (5%) Query: 3 LAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWG 62 +AG+SLLTLLDDIA +LDD+++M K+AAKKTAGVLGDDL+LNAQQVSGV A+RELPVVW Sbjct: 1 MAGASLLTLLDDIAAILDDVALMSKVAAKKTAGVLGDDLALNAQQVSGVSADRELPVVWA 60 Query: 63 VAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEAR--KHKED 120 VA GSL NK ILVP AL+ISAFIP AITPLLM GG FLCFEG EK+ H KH E Sbjct: 61 VAIGSLKNKCILVPAALLISAFIPQAITPLLMFGGLFLCFEGFEKLYHSYTHHRVKHSEG 120 Query: 121 PAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSG 180 + + ++ LAA +EK+KIKGAIRTDF+LSAEI+AITLG+VAEA QV+ LS Sbjct: 121 EEGAVRLVDDLAA-----YEKEKIKGAIRTDFVLSAEIIAITLGVVAEASFSTQVVTLSA 175 Query: 181 IALVVTVGVYGLVGVIVKIDDLGYWLAEKS-----SALMQALGKGLLIIAPWLMKALSIV 235 IAL++T+GVYGLV IVK+DDLG +L + + + G GL+ AP+LMK L++V Sbjct: 176 IALMMTIGVYGLVAGIVKLDDLGLYLNRREGPGLFTRFGRWFGGGLVNAAPYLMKGLTVV 235 Query: 236 GTLAMFLVGGGIVVHGIAPLHHAIEHFAG------QQSAVVAMILPTVLNLILGFIIGGI 289 GT+AMF+VGGGI+ HG+ + I H A ++ I P++LN + G + G + Sbjct: 236 GTVAMFMVGGGILTHGLHVVSEHITHVATLVGELSVVGPTLSFITPSLLNTLFGIVAGAL 295 Query: 290 VVLGVKAVEKMRGQAH 305 + + V+K+RG + Sbjct: 296 ALALISMVQKIRGNTN 311 >UniRef50_C7NKD3 Uncharacterized conserved protein n=2 Tax=Actinomycetales RepID=C7NKD3_KYTSD Length = 366 Score = 302 bits (773), Expect = 1e-80, Method: Composition-based stats. Identities = 117/312 (37%), Positives = 174/312 (55%), Gaps = 30/312 (9%) Query: 5 GSSLLTLLDDIATLLDDISVM-------GKLAAKKTAGVLGDDLSLNAQQVSGVRANREL 57 L LLDDIA + + A+ K AGV+ DD ++ Q + G NREL Sbjct: 2 AGGLAALLDDIAAMARLAAASVDDVAAGAAKASTKAAGVVVDDAAVTPQYLEGAEPNREL 61 Query: 58 PVVWGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKH 117 P++W +AKGSL NK I+VP+ L++S F PW +TPLLM+GG +LCFEG EKV + H Sbjct: 62 PMIWRIAKGSLRNKAIIVPVLLLLSQFAPWILTPLLMLGGTYLCFEGAEKVWEKISG--H 119 Query: 118 KEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLV 177 +D + +R E+ E+ +K AI TDF+LS EI+ I+L V + LL++ L+ Sbjct: 120 GDDGKAADERSEQ--------DEEQVVKSAITTDFVLSCEILVISLNEVTDQSLLSRGLI 171 Query: 178 LSGIALVVTVGVYGLVGVIVKIDDLGYWLAEK--SSALMQALGKGLLIIAPWLMKALSIV 235 L +AL++TV VYG V +IVK+DD+G LA+K + LG+G++ P ++ + V Sbjct: 172 LVVVALLMTVVVYGAVALIVKMDDVGLHLAKKNDEGSAGHKLGRGMVKAMPTVLDIIGFV 231 Query: 236 GTLAMFLVGGGIVVHGIAPL---------HHAIEHFAGQQ--SAVVAMILPTVLNLILGF 284 G LAM VGG I++ GI HH + AG ++A + T++ + LG Sbjct: 232 GMLAMLWVGGHIIMVGIDEYGLSAPYDLAHHLADMVAGTPVIGGLLAWLADTLVAMALGL 291 Query: 285 IIGGIVVLGVKA 296 + G I+V + Sbjct: 292 VWGAIIVAVLHV 303 >UniRef50_D0W1M0 Inner membrane protein YedI n=2 Tax=Proteobacteria RepID=D0W1M0_NEICI Length = 286 Score = 299 bits (766), Expect = 9e-80, Method: Composition-based stats. Identities = 142/297 (47%), Positives = 195/297 (65%), Gaps = 12/297 (4%) Query: 3 LAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWG 62 +A +SL TLLDDIA +LDD+++M K AAKKT GV+GDDL+LNA QV+G+ + RELP++W Sbjct: 1 MAFASLFTLLDDIAAVLDDVALMTKTAAKKTVGVVGDDLALNANQVAGISSERELPIIWA 60 Query: 63 VAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPA 122 VAKGSL NK+IL+P AL++S F+P AITPLL IGG +LCFEGVEK+LH R + Sbjct: 61 VAKGSLFNKLILIPAALLLSTFLPQAITPLLTIGGIYLCFEGVEKLLHKFLHRNVNLEAE 120 Query: 123 QSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIA 182 + + E++KIKGAIRTDFILSAEI+ I LG V + LL + LV++ I Sbjct: 121 TAT-----------SENEQEKIKGAIRTDFILSAEIIIIALGTVGQYGLLTRSLVMAAIG 169 Query: 183 LVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFL 242 + +TV VYGLV VIVK+DDLG L ++ L++ G+ L+ PW M+ L+I GT+AMFL Sbjct: 170 IGMTVFVYGLVAVIVKLDDLGILLMKRPQNLLRRTGRTLISFMPWFMRGLAIAGTIAMFL 229 Query: 243 VGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVEK 299 VGGG+V H + L H H S ++ + ++ L G + V+ + + Sbjct: 230 VGGGLVSHNLGFL-HDFLHTHHWDSGWISHLSDLLIGLAAGSLACAAVLPLINCFRR 285 >UniRef50_A0M4Q9 Membrane protein containing DUF808 n=17 Tax=Bacteria RepID=A0M4Q9_GRAFK Length = 291 Score = 298 bits (762), Expect = 2e-79, Method: Composition-based stats. Identities = 134/301 (44%), Positives = 199/301 (66%), Gaps = 14/301 (4%) Query: 5 GSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWGVA 64 S LLDDIA L+DD+SVM K+A KKTAG+LGDDL++NA++ SG ++RELPV+W + Sbjct: 2 ASGFFALLDDIAALMDDVSVMTKVAGKKTAGLLGDDLAVNAEKASGFMSSRELPVLWAIT 61 Query: 65 KGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPAQS 124 KGSL+NK I++P+A ++SAF+P AIT +L+IGG +L +EG EK+ H Sbjct: 62 KGSLLNKAIILPVAFLLSAFVPTAITIILLIGGLYLAYEGAEKIYEYFFPHAH----PSE 117 Query: 125 QQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIALV 184 + LE+L ++ L+ EK+KIK AI TDFILS EIV I LG V++ L Q++V++ IAL+ Sbjct: 118 KPVLEELTKEEALEREKEKIKSAILTDFILSIEIVIIALGAVSQEILSTQIIVVTIIALI 177 Query: 185 VTVGVYGLVGVIVKIDDLG---YWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMF 241 TVGVYG+V +IV++D+ G L E+ + +GK L+ PW++K+LS++GT+A+ Sbjct: 178 ATVGVYGVVALIVRMDEFGAKLINLNEQEDSFSDKVGKFLVRALPWVIKSLSVIGTIALM 237 Query: 242 LVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVEKMR 301 LV GGI H I L G ++ ++I+ V+ L++G I+ +V LG K + +R Sbjct: 238 LVSGGIFTHSIHFL-------DGLFESIPSIIVEFVIGLVVGIIMVLLVNLGKKIWKAVR 290 Query: 302 G 302 Sbjct: 291 K 291 >UniRef50_D2QIJ1 Putative uncharacterized protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QIJ1_9SPHI Length = 305 Score = 290 bits (743), Expect = 4e-77, Method: Composition-based stats. Identities = 109/283 (38%), Positives = 160/283 (56%), Gaps = 18/283 (6%) Query: 6 SSLLTLLDDIATL-------LDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELP 58 S LLDDI+ L LDD+ K +G++ DD ++ + V G+ +REL Sbjct: 3 SGFFALLDDISALVKASAASLDDVPTQVAKTTGKVSGIVIDDTAVTPKYVVGLDPSRELA 62 Query: 59 VVWGVAKGSLINKVILV-PLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKH 117 +++ +AK SLINK++L+ P ALI+ F PWAITP+LM+GGA+LCFEG EKV + H Sbjct: 63 IIYQIAKKSLINKLLLLSPAALILGYFAPWAITPILMVGGAYLCFEGYEKVHSLFS--HH 120 Query: 118 KEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLV 177 D + E++ P + EK+++ A+RTD ILSAEI+AI V ++NQ++V Sbjct: 121 DGDTNR-----EQVKEITPEELEKERVGSAVRTDIILSAEIIAIAYSQVTGQAIVNQIVV 175 Query: 178 LSGIALVVTVGVYGLVGVIVKIDDLGYWLA-EKSSALMQALGKGLLIIAPWLMKALSIVG 236 + +A+ +TV VYG VG++VK DD+G LA K +Q +G+ ++ P + L VG Sbjct: 176 MVAVAIFITVAVYGFVGLLVKADDIGLHLAGNKYPPAIQKIGRSVVKFMPHFLSWLGYVG 235 Query: 237 TLAMFLVGGGIVVHGIAPLHHAIEHFAGQQS--AVVAMILPTV 277 T AM VG I+ HGI H + S VVA + Sbjct: 236 TAAMLWVGAEIIAHGIPFTAHLLHELEQSLSSMPVVAWFAKAL 278 >UniRef50_C6AJU4 Inner membrane protein YedI n=20 Tax=Proteobacteria RepID=C6AJU4_AGGAN Length = 287 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 152/297 (51%), Positives = 203/297 (68%), Gaps = 13/297 (4%) Query: 3 LAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWG 62 +A SSL TLLDDIA+LLDD+SVM K+AAKKT GV+GDDL+LNA QV+G A RELP+VW Sbjct: 1 MAFSSLFTLLDDIASLLDDVSVMTKVAAKKTVGVVGDDLALNANQVTGATAERELPIVWA 60 Query: 63 VAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPA 122 V KGSL+NK+IL+P+AL++SAF+P I PLLMIGGA+LCFEGVEK+LH H E Sbjct: 61 VTKGSLVNKIILIPIALLLSAFLPALIVPLLMIGGAYLCFEGVEKILHKFFFAHHDE--- 117 Query: 123 QSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIA 182 + EK KIKGAIRTDFILSAEI+ I LG +++A +L Q++ L I Sbjct: 118 --------PHEDNKPFDEKAKIKGAIRTDFILSAEIIIIALGELSDAEILTQIISLIIIG 169 Query: 183 LVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFL 242 L +T+ VYG+V +IVK DD G +L +K + + LGKG+L I P M++LS +GT+AMFL Sbjct: 170 LGITLVVYGIVALIVKADDFGVFLIKK-GGVAETLGKGILFIMPKFMRSLSFIGTIAMFL 228 Query: 243 VGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVEK 299 VGGGI VH + LHH + + + ++ V+ L +G + +V+ +K E+ Sbjct: 229 VGGGIFVHNVETLHHLLADY-QIAEGWLGILSTIVVGLAVGALCCLVVLPVMKLFEE 284 >UniRef50_C7R5J1 Putative uncharacterized protein n=3 Tax=Actinomycetales RepID=C7R5J1_JONDD Length = 313 Score = 279 bits (715), Expect = 7e-74, Method: Composition-based stats. Identities = 119/316 (37%), Positives = 179/316 (56%), Gaps = 24/316 (7%) Query: 5 GSSLLTLLDDIATL-------LDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANREL 57 S L LLDDIA L LDD+S A+ K+AGV+ DD ++ Q V GV REL Sbjct: 2 ASGFLALLDDIAVLARAAASSLDDLSAAAMKASAKSAGVVIDDAAVTPQYVQGVSPKREL 61 Query: 58 PVVWGVAKGSLINK-VILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARK 116 V+ + GSL NK +I++P A+I + + PW + LL++GGA+L FEG EKVL Sbjct: 62 HVIKRITLGSLRNKFLIILPAAMIFTTWAPWILPILLIVGGAYLTFEGAEKVLGWFGVHL 121 Query: 117 HKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVL 176 H E + +++P +FE ++GA+RTD ILS EI+ ITL V +++++ Sbjct: 122 HGEKETLT-------TSENPDEFENTLVRGAVRTDLILSTEIMLITLSNVDVDGFVDRLI 174 Query: 177 VLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVG 236 VL +ALV+T VYG V V+VK+DD+G LA + + A+G+GL+ + P + ALSI+G Sbjct: 175 VLIIVALVMTAVVYGAVAVLVKMDDIGLVLARSRADAVGAVGRGLVAVMPKVFTALSIIG 234 Query: 237 TLAMFLVGGGIVVHGIAPLH--------HAIEHFAGQQSA-VVAMILPTVLNLILGFIIG 287 T+AM VGG I+ ++ L H + H V A + T+ + + G ++G Sbjct: 235 TVAMLWVGGHILTASMSDLGFSLFYDIAHDVAHAVEPWGGAVGAWVADTLYSAVFGVLVG 294 Query: 288 GIVVLGVKAVEKMRGQ 303 ++V V V K+R + Sbjct: 295 LLIVAVVAGVGKLRHR 310 >UniRef50_A8EUP4 Conserved hypothetical membrane protein (DUF808) n=2 Tax=Campylobacterales RepID=A8EUP4_ARCB4 Length = 368 Score = 279 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 119/352 (33%), Positives = 183/352 (51%), Gaps = 66/352 (18%) Query: 1 MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRAN------ 54 M SL T LDDI L DDI+ KLA+ K++G+L DDL+ A + + Sbjct: 23 MATTAKSLATSLDDIGLLFDDIATYTKLASIKSSGLLVDDLAAIANFTNETTSEILKKEL 82 Query: 55 ---------------------------------------------RELPVVWGVAKGSLI 69 RELP+V+ +AKGS I Sbjct: 83 EKAKSVEEFQENIKKLDTKTQQEIILELEHIRNVAMLEAKRKAALRELPIVYKIAKGSFI 142 Query: 70 NKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARK-HKEDPAQSQQRL 128 NK I++P+ L++S PWAI P+L+IGGA+L +EGVE +L + H ED + + Sbjct: 143 NKFIIIPIVLLLSYLAPWAIAPILIIGGAYLAYEGVESILEKFFHHEEHNEDNNKKEISN 202 Query: 129 EKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIALVVTVG 188 E FE +K+K A++TDFILS EI+ I+L ++ + L ++ VL + ++ T+ Sbjct: 203 EN--------FEDEKVKSAVKTDFILSFEIIVISLSLLDNSDFLTKLFVLISVGILTTIF 254 Query: 189 VYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIV 248 VYG+V I+K+DD+G++L EK S ++Q +G G + P+++K + ++GT+AM VGGGI+ Sbjct: 255 VYGIVAFIIKLDDIGFYLQEKRSEILQKIGDGFVKAMPYIIKVIGVLGTIAMLAVGGGII 314 Query: 249 VHGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVEKM 300 H H + F+ AV + ++LG I+G IVVL V K+ Sbjct: 315 AHET----HILSSFSETLKAVP--LGGFFSEILLGAIVGYIVVLVVPIFSKV 360 >UniRef50_B2SBI3 Tetracycline resistance protein n=34 Tax=Brucella RepID=B2SBI3_BRUA1 Length = 318 Score = 276 bits (707), Expect = 5e-73, Method: Composition-based stats. Identities = 115/317 (36%), Positives = 179/317 (56%), Gaps = 29/317 (9%) Query: 5 GSSLLTLLDDIATL-------LDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANREL 57 S L LLD+IA + LDD++ A+ K AG++ DD ++ + V G+ REL Sbjct: 7 ASGLFALLDNIAAIAKMAAASLDDVAGQTAKASAKAAGIVIDDTAVTPKYVVGLTPEREL 66 Query: 58 PVVWGVAKGSLINKVI-LVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARK 116 PV+W + KGSL NK+I L+P+AL++ F P I PLLM+GG +L FEG EK++ Sbjct: 67 PVIWKITKGSLRNKLIFLLPIALVLGYFAPDFIMPLLMLGGIYLAFEGTEKLVEFFLPHD 126 Query: 117 HKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVL 176 +E + E + GAIRTDFILSAEI+A+TL + + + Q + Sbjct: 127 EEEHSETQGNSA--------REIEASTVAGAIRTDFILSAEIMALTLAGLPPSSIFTQAI 178 Query: 177 VLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKS-SALMQALGKGLLIIAPWLMKALSIV 235 +L+ + +++T VYG+VG+IVK+DD+G L S +++ + LGKGL+ P L++ LS V Sbjct: 179 ILAAVGILITFAVYGVVGIIVKLDDMGASLFMHSHTSVGRKLGKGLVGAMPVLLETLSSV 238 Query: 236 GTLAMFLVGGGIVVHGIAPLH-HAIEHFAGQQSAVVA-----------MILPTVLNLILG 283 GT+AM VGG I+VHG+A L H +E F + + ++ + L +L Sbjct: 239 GTIAMLWVGGSIIVHGLASLGFHTVEEFIRSVAQAIPAERFPFPEAVRWVVTSFLQAVLA 298 Query: 284 FIIGGIVVLGVKAVEKM 300 + G + V+ V +++ Sbjct: 299 VLTGLVAVVIVHLAKRI 315 >UniRef50_C8NMU2 Membrane protein n=36 Tax=Bacteria RepID=C8NMU2_COREF Length = 322 Score = 276 bits (705), Expect = 9e-73, Method: Composition-based stats. Identities = 114/320 (35%), Positives = 174/320 (54%), Gaps = 25/320 (7%) Query: 5 GSSLLTLLDDIATLLDDIS-------VMGKLAAKKTAGVLGDDLSLNAQQVSGVRANREL 57 L LLDD+A + + + + K AGV+ DD ++ Q V GV+ REL Sbjct: 2 AGGLAALLDDVAAIARAAAASVDDVAGLAGKTSVKAAGVVVDDAAVTPQYVDGVKPAREL 61 Query: 58 PVVWGVAKGSLINKVILVPLALII-SAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARK 116 P++W +AKGSL+NK+I++ ++ S+F PWA+TP+LM+GG +LCFEG EK+ H + R Sbjct: 62 PMIWRIAKGSLVNKIIIILPIALLLSSFAPWALTPILMLGGTYLCFEGAEKIWHSIHTRM 121 Query: 117 HKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVL 176 H ED + +Q K E +KGAI TD ILSAEI+ I+L + + Q Sbjct: 122 HHEDKPMVPK------SQAGPKSEDALVKGAITTDLILSAEIMVISLNEITAETIWMQAA 175 Query: 177 VLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKS--SALMQALGKGLLIIAPWLMKALSI 234 L + + +T VYG+V ++VK+DD+G +A + SA G+GL+ P +++ +S+ Sbjct: 176 TLFVVGVGITALVYGVVALLVKMDDMGLAVATREGASAGAVRFGRGLVKAMPIILQIISV 235 Query: 235 VGTLAMFLVGGGIVVHGIAPLHHAI---------EHFAGQQSAVVAMILPTVLNLILGFI 285 +G AM VGG I+V G+ L + E AG + TV +L G + Sbjct: 236 IGVFAMLWVGGHIMVVGLDELGWHLPYGLVHGLEEFAAGAAGGFAGWLGNTVGSLAFGAV 295 Query: 286 IGGIVVLGVKAVEKMRGQAH 305 G +VV+ V AV KM ++ Sbjct: 296 WGALVVIIVTAVGKMINRSR 315 >UniRef50_B8R4L5 Putative ABC transport system membrane protein n=1 Tax=Arthrobacter globiformis RepID=B8R4L5_ARTGO Length = 311 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 116/294 (39%), Positives = 164/294 (55%), Gaps = 24/294 (8%) Query: 17 TLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWGVAKGSLINK-VILV 75 ++DDI A+ KTAGV+ DD ++ Q V G+ RELPVVW +A GSL+NK VI++ Sbjct: 7 AVVDDILTAALKASAKTAGVVIDDAAVTPQYVQGITPARELPVVWKIALGSLVNKFVIII 66 Query: 76 PLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQD 135 P+AL+++AF PW + LL+IGG FLCFEG EKVL A ED D Sbjct: 67 PIALLLTAFAPWVLPYLLIIGGGFLCFEGAEKVLEWFGAHHESED--------------D 112 Query: 136 PLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVL-VLSGIALVVTVGVYGLVG 194 + EK + GAIRTD ILS EI+ I L + L L L+ I L +T VYG V Sbjct: 113 GPRDEKKLVFGAIRTDLILSTEIMLIALTSLDPGFGLGMTLGALAVIGLGMTALVYGAVA 172 Query: 195 VIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVV----- 249 ++VKIDD+G L + S ++ G ++ P + + +S+VGT+AM VGG +V+ Sbjct: 173 LLVKIDDIGLRLMKSPSRGIRRAGARVVASMPAVFRVISVVGTVAMLWVGGHLVIANLAE 232 Query: 250 ---HGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVEKM 300 HG L HA+ H VV I+ T L+ + G ++G ++V V V ++ Sbjct: 233 TFWHGPYDLVHAVTHLVEAAGPVVVWIVDTALSAVFGLVVGLVIVAVVTGVSRL 286 >UniRef50_B8H5Q0 Conserved membrane spanning protein n=64 Tax=Bacteria RepID=B8H5Q0_CAUCN Length = 314 Score = 272 bits (697), Expect = 8e-72, Method: Composition-based stats. Identities = 129/318 (40%), Positives = 179/318 (56%), Gaps = 27/318 (8%) Query: 6 SSLLTLLDDIATL-------LDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELP 58 S L LLDD+A + LDD+ A K GV+ DD ++ G +RELP Sbjct: 3 SGLAALLDDVAAITKLAAASLDDVGAAAGKAGTKAVGVVVDDAAVTPGYAIGFTPDRELP 62 Query: 59 VVWGVAKGSLINKVI-LVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKH 117 +VW +A GSL NK+I L+P ALI+SAF PWA+TP+LM+GGA+L FE EKVL Sbjct: 63 IVWKIAMGSLRNKLIFLLPGALILSAFAPWAVTPILMLGGAYLAFEATEKVLEAFTPEAE 122 Query: 118 KEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLV 177 E + A EK K+ GAIRTD ILS EI+AI L VA L Q Sbjct: 123 GE--------AIEELALSGPDLEKQKVDGAIRTDLILSGEIMAIALAEVAHLSLAMQAGA 174 Query: 178 LSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGT 237 L+ + +++TVGVYG V +IVK+DD+G L+ + + QALG+GL+ P M+AL+++GT Sbjct: 175 LALVGVLLTVGVYGAVALIVKMDDIGLHLSRRPNKGSQALGRGLVKAMPVTMEALTVIGT 234 Query: 238 LAMFLVGGGIVVHGIAPLH-----HAIE---HFAGQQ---SAVVAMILPTVLNLILGFII 286 AM VGGGI+VHG+ H H +E H+AGQ V + + + ++G +I Sbjct: 235 AAMLWVGGGIIVHGLEHFHLTPIPHWVEGLSHWAGQAPVVGPVTGWLAFALGSAVVGLVI 294 Query: 287 GGIVVLGVKAVEKMRGQA 304 GG++ + +G A Sbjct: 295 GGVLAGVMHLWHHRKGAA 312 >UniRef50_A5P853 Putative uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P853_9SPHN Length = 318 Score = 271 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 125/313 (39%), Positives = 185/313 (59%), Gaps = 32/313 (10%) Query: 6 SSLLTLLDDIATL-------LDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELP 58 + L+ LLDD++ + +DD++ A KTAGV+ DD ++ V+G+ RELP Sbjct: 3 TGLVALLDDVSIIARTAAASVDDVAAAAGRAGSKTAGVIIDDAAVTPSYVTGLSPARELP 62 Query: 59 VVWGVAKGSLINKVI-LVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKH 117 ++W + KGS NK+I L+P AL++S F+P AI +LM+GGAFL +EG EKV+ L KH Sbjct: 63 IIWAITKGSFKNKLIFLLPGALLLSEFLPSAIILILMLGGAFLSYEGAEKVMEKLGGEKH 122 Query: 118 KEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAP----LLN 173 + + QDP+ FEK ++ GAIRTD ILSAEI+AI L ++ Sbjct: 123 GKT--------VEDVIQDPVAFEKQRVAGAIRTDLILSAEIMAIVLNELSSETIVETFWQ 174 Query: 174 QVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALS 233 + L L+ +A+ VTV VYG V +IVK+DD+G L +KSSA QA+G+ LL PWL+K LS Sbjct: 175 RGLALALVAIAVTVVVYGSVALIVKMDDVGLHLTKKSSATAQAIGRALLKGMPWLLKTLS 234 Query: 234 IVGTLAMFLVGGGIVVHGIAPLH------------HAIEHFAGQQSAVVAMILPTVLNLI 281 VGT+AM VGGGIVVHG L +A+++ G S + + ++ + Sbjct: 235 FVGTIAMLWVGGGIVVHGTHELGFDLFYDIAHGAEYAVQNATGALSGLAGWVTYAGISAL 294 Query: 282 LGFIIGGIVVLGV 294 +G +G ++ + + Sbjct: 295 IGLALGFVIAMLI 307 >UniRef50_B8HHA1 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B8HHA1_ARTCA Length = 351 Score = 266 bits (681), Expect = 5e-70, Method: Composition-based stats. Identities = 108/270 (40%), Positives = 160/270 (59%), Gaps = 20/270 (7%) Query: 38 GDDLSLNAQQVSGVRANRELPVVWGVAKGSLINKVILVPLALII-SAFIPWAITPLLMIG 96 DD ++ Q VSG +RELP++ + GSL NK++++ AL++ SAFIPW I +LM+G Sbjct: 42 IDDAAVTPQYVSGADPSRELPMIKKIFWGSLRNKLLIILPALLLISAFIPWIIPFILMLG 101 Query: 97 GAFLCFEGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSA 156 G +LC+EG EKV H L ++ + + R E +KGAI TDFILS Sbjct: 102 GTYLCYEGAEKVWHKLRGHHSADEDSPAVDRGPDA--------ESKVVKGAITTDFILSC 153 Query: 157 EIVAITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQA 216 EI+ I + V +A L + L+L +A+V+TV VYG V +IVK+DD+G LA K SA Q Sbjct: 154 EIMVIAMNEVPDASLWVRALILVVVAVVITVAVYGAVALIVKMDDVGMHLAAKDSAGSQR 213 Query: 217 LGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVV--------HGIAPLHHAIEH-FAGQQ- 266 G+ L+ P ++ A++ +GT+AM VGG I++ H + L HA+EH FAG Sbjct: 214 FGELLVRGMPKVLGAITFIGTIAMLWVGGHIMLQGTHDLGWHTLYDLVHALEHPFAGIAA 273 Query: 267 -SAVVAMILPTVLNLILGFIIGGIVVLGVK 295 +A ++ T+ + ++GFI G IV+L V Sbjct: 274 VGGFLAWLVNTLCSAVIGFIWGTIVMLVVT 303 >UniRef50_B8IG37 Putative uncharacterized protein n=5 Tax=Rhizobiales RepID=B8IG37_METNO Length = 345 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 125/306 (40%), Positives = 172/306 (56%), Gaps = 44/306 (14%) Query: 5 GSSLLTLLDDIATLLD-------DISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANREL 57 + L+ L+DDIA L D + A+ K AGV+ DD ++ + V G+ A+REL Sbjct: 2 ATGLIALIDDIAGLAKMAAASLDDAASQAARASAKAAGVVIDDTAVTPRYVVGLSASREL 61 Query: 58 PVVWGVAKGSLINKVI-LVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARK 116 P++ +A GSL NK++ L+P AL +S PW +TPLLMIGGA+LCFEG EKV L Sbjct: 62 PIIGKIALGSLKNKLLFLLPGALALSFLAPWLLTPLLMIGGAYLCFEGAEKVHEALWPH- 120 Query: 117 HKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVL 176 A + E +DP E +K++ I+TDFILSAEI+A+TL V+EA L Q+ Sbjct: 121 -----AAHAEEAEDPVPRDPKALEDEKVRSTIKTDFILSAEIMALTLATVSEARLGTQIF 175 Query: 177 VLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSA------------------------ 212 VL+ + + +T VYG+V +IVK DD+G LA +S Sbjct: 176 VLAAVGIGITALVYGVVALIVKADDVGLALARESRPASSLLGLRVPPRPSATPADRALAL 235 Query: 213 LMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVH-----GIAPLHHAIEHFA-GQQ 266 L + LG+G++ P L++ L IVGT AM VGGGI+VH G+A + HAIEH A G Sbjct: 236 LTRGLGRGMVRGMPVLLRGLGIVGTAAMIWVGGGIIVHGLESFGLAAIGHAIEHAAQGAA 295 Query: 267 SAVVAM 272 AV A Sbjct: 296 DAVPAG 301 >UniRef50_B6IVS2 Inner membrane protein, putative n=3 Tax=Alphaproteobacteria RepID=B6IVS2_RHOCS Length = 366 Score = 249 bits (636), Expect = 8e-65, Method: Composition-based stats. Identities = 115/290 (39%), Positives = 155/290 (53%), Gaps = 43/290 (14%) Query: 6 SSLLTLLDDI-------ATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELP 58 + L+ LLDD+ A +DD + A K AGV+ DD ++ + V+G A RELP Sbjct: 3 TGLIALLDDVVGLAKVAAASIDDAAGQASRAGAKAAGVVVDDAAVTPRYVTGFSAERELP 62 Query: 59 VVWGVAKGSLINK-VILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKH 117 ++ + GSL NK + L+PLAL++S PWAITPLLM+GGAFLC+EG EKV + Sbjct: 63 IIGRITVGSLKNKLLYLLPLALLLSLVAPWAITPLLMLGGAFLCYEGAEKVYEAVWPHAV 122 Query: 118 KEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEA--PLLNQV 175 P + QD E++K+ GAI+TDFILSAEI+AITL VAE Q Sbjct: 123 THGPGGAV----AATIQDARALEEEKVSGAIKTDFILSAEIMAITLSTVAEETSSFWGQA 178 Query: 176 LVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKS------------------------- 210 VL+ + + +T+ VYG V +IVK DD+G LA Sbjct: 179 AVLAIVGIGITLAVYGTVALIVKADDVGLALARNPRPVSTLLGLRRAAAADPTATDPTGA 238 Query: 211 ----SALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLH 256 + L Q LG+GL+ P +K L +VGT AM VGGGIV+HG+ Sbjct: 239 DRALAGLTQGLGRGLVRFMPVFLKLLGLVGTAAMLWVGGGIVLHGLEVYG 288 >UniRef50_C7MEM6 Uncharacterized conserved protein n=28 Tax=Bacteria RepID=C7MEM6_BRAFD Length = 317 Score = 236 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 110/312 (35%), Positives = 168/312 (53%), Gaps = 31/312 (9%) Query: 5 GSSLLTLLDDIATLLDDISVMGKLAAKKTA-------GVLGDDLSLNAQQVSGVRANREL 57 L LLDDIA L + A +A GV+ DD ++ Q V G+ REL Sbjct: 2 AGGLAALLDDIAALARLAAASADDVAAASAKASSKAVGVVIDDAAVTPQYVRGIEPRREL 61 Query: 58 PVVWGVAKGSLINKVILVPLALIISAF-IPWAITPLLMIGGAFLCFEGVEKVLHMLEARK 116 P++W +AKGSL NK++++ L++ + PW +TP+LM+GG +L FEG EK+ ++ Sbjct: 62 PIIWRIAKGSLRNKLLIILPVLLLLSVIAPWLLTPILMLGGLYLSFEGAEKIGELV---- 117 Query: 117 HKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVL 176 + P S A E + GA+RTD ILSAEI+ I++ V L + Sbjct: 118 -RGAPTTSPVTAAGGDA------EDRIVSGAVRTDLILSAEIMVISMDAVDATSLWIRTA 170 Query: 177 VLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKS-SALMQALGKGLLIIAPWLMKALSIV 235 VL +AL +T VYG VG++VK+DD+G ++ + SAL Q +G+GL+ P +M +S+V Sbjct: 171 VLLVVALAITALVYGAVGLLVKMDDIGVSMSSREGSALAQRIGRGLVRSMPRVMDVISVV 230 Query: 236 GTLAMFLVGGGIVVHGIAPLH--------HAIE---HFAGQQSAVVAMILPTVLNLILGF 284 G +AM VGG I++ G L H +E AV+A ++ TV +L++G Sbjct: 231 GMIAMLWVGGHILLVGTHELGLAQPYGLVHRLEGLAAGVAGVGAVLAWLVNTVFSLVIGV 290 Query: 285 IIGGIVVLGVKA 296 ++GG+V V Sbjct: 291 LLGGVVAAIVHL 302 >UniRef50_UPI000050FF39 hypothetical protein BlinB_11411 n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FF39 Length = 273 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 15/201 (7%) Query: 116 KHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQV 175 +H E+P + + +K EK ++ AI TDF+LS EI+ I L VA L+ + Sbjct: 18 EHHEEPKKESKHGKKGDGDA----EKKIVRSAITTDFVLSCEIMVIALNEVASEDLIPRA 73 Query: 176 LVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIV 235 ++L +AL +T+GVYG V +IVK+DD+G +A+K A Q G+ L+ P L+ LS++ Sbjct: 74 IILVVVALAITIGVYGSVALIVKMDDIGLHMAQKEKASTQKFGRFLVKAMPKLLGGLSVI 133 Query: 236 GTLAMFLVGGGIVVHGIAPLH-HAIEHFAGQQ----------SAVVAMILPTVLNLILGF 284 GT AM VGG I++ G L HA+ F ++ ++ T +LILG Sbjct: 134 GTFAMLWVGGHIILVGTDELGFHALYDFVHHLEEPVAAIAGVGGILGWLVNTFFSLILGA 193 Query: 285 IIGGIVVLGVKAVEKMRGQAH 305 GGIV + + Sbjct: 194 AWGGIVAGIAIGFTALLKSGN 214 >UniRef50_C6S5Y4 Putative uncharacterized protein n=5 Tax=Neisseria meningitidis RepID=C6S5Y4_NEIML Length = 276 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 71/129 (55%), Positives = 90/129 (69%) Query: 2 LLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVW 61 L+A +SL TL DDI +LDD+++M K AAKKTAGV+GDDL+ NA +V+GV A RELP+VW Sbjct: 25 LMAFASLFTLPDDITAVLDDVALMTKAAAKKTAGVVGDDLAPNANRVTGVSAERELPIVW 84 Query: 62 GVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDP 121 +AKGS NK +LVP AL++SAF+P ITPLL GG +LCFEGVEK+LH R Sbjct: 85 SMAKGSFSNKPVLVPAALLLSAFLPQLITPLLTAGGIYLCFEGVEKLLHKFLHRHDAHAR 144 Query: 122 AQSQQRLEK 130 + Sbjct: 145 NGGNRHRHD 153 >UniRef50_Q9ZAK8 Putative uncharacterized protein mutK n=1 Tax=Vibrio cholerae RepID=Q9ZAK8_VIBCH Length = 163 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 61/138 (44%), Positives = 93/138 (67%), Gaps = 4/138 (2%) Query: 171 LLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAE--KSSALMQALGKGLLIIAPWL 228 +L Q+LV+S IA+++T+GVYGLV IVK+DDLG++L K L +LG L+ AP L Sbjct: 1 MLTQILVVSLIAVIMTIGVYGLVAGIVKLDDLGFYLQRPSKGQGLKASLGGVLVRFAPKL 60 Query: 229 MKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSA--VVAMILPTVLNLILGFII 286 MK L++VGT A+FLVGGGIVVH + +HH +E A VV ++PT++N ++G + Sbjct: 61 MKGLTVVGTAAIFLVGGGIVVHNVPAVHHILEPMLDVLHAWPVVGTLMPTLINGVIGVMA 120 Query: 287 GGIVVLGVKAVEKMRGQA 304 G +++ ++ K+RG + Sbjct: 121 GSLLITVMEVWHKIRGNS 138 >UniRef50_UPI0001AF2FA6 hypothetical protein Psyrpo1_12001 n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF2FA6 Length = 89 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 3/88 (3%) Query: 221 LLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMI---LPTV 277 +L +AP LMK LSIVGT AMF+VGGGI+VHG+ +HH +E V + +PT+ Sbjct: 1 MLWLAPVLMKVLSIVGTAAMFMVGGGILVHGLPFVHHWVEGVTEAAEGAVGGLSLVVPTL 60 Query: 278 LNLILGFIIGGIVVLGVKAVEKMRGQAH 305 ++ + G I G ++VL V + K+ A Sbjct: 61 IDAVAGIIAGAVLVLVVTLIGKLWKAAR 88 >UniRef50_B3SFI5 Putative uncharacterized protein n=2 Tax=cellular organisms RepID=B3SFI5_TRIAD Length = 173 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 6/98 (6%) Query: 199 IDDLGYWLAEKS-----SALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIA 253 +DD+G ++ KS + L + +G+ LL+ AP LMK L++VGT+AMFLVGGGI+ H I Sbjct: 1 MDDVGLYMLRKSLTGSMNTLQRFIGRALLVAAPALMKTLAVVGTVAMFLVGGGILTHSIG 60 Query: 254 PLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVV 291 L H I + ++++ + + ++G V+ Sbjct: 61 FL-HVITDWFTALIPDASLVMSILADGVVGIAAATSVL 97 >UniRef50_Q6LGY0 Putative uncharacterized protein SF2002 n=1 Tax=Photobacterium profundum RepID=Q6LGY0_PHOPR Length = 107 Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 4/87 (4%) Query: 205 WLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAG 264 L + L L L+ AP+LMK L++VGT+AMFLVGGGIVVH + P H I H Sbjct: 9 ALGDAECRLYNHLYDFLVNPAPYLMKILAVVGTMAMFLVGGGIVVHSV-PNSHDIVHAIT 67 Query: 265 QQSAVVA---MILPTVLNLILGFIIGG 288 + A + +I PT+ N ++ G Sbjct: 68 ESVATIPTADVIAPTLFNGVVCCSWCG 94 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.317 0.143 0.405 Lambda K H 0.267 0.0439 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,181,796,587 Number of Sequences: 3077464 Number of extensions: 49279513 Number of successful extensions: 209531 Number of sequences better than 1.0e-01: 60 Number of HSP's better than 0.1 without gapping: 50 Number of HSP's successfully gapped in prelim test: 38 Number of HSP's that attempted gapping in prelim test: 209245 Number of HSP's gapped (non-prelim): 136 length of query: 305 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 177 effective length of database: 646,480,964 effective search space: 114427130628 effective search space used: 114427130628 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 93 (40.3 bits)