BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (269 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P33228 Protein recT n=37 Tax=root RepID=RECT_ECOLI 558 e-158 UniRef50_Q9AKZ0 Putative uncharacterized protein n=1 Tax=Legione... 256 4e-67 UniRef50_C9S1B3 RecT protein n=15 Tax=root RepID=C9S1B3_GEOSY 241 1e-62 UniRef50_C0Q2I7 Rac prophage; recombination and repair protein n... 235 1e-60 UniRef50_A9I8T0 Phage-related DNA recombination protein n=11 Tax... 227 3e-58 UniRef50_A6LN18 RecT protein n=2 Tax=Bacteria RepID=A6LN18_THEM4 224 3e-57 UniRef50_B9EBP3 Putative uncharacterized protein n=1 Tax=Macroco... 223 5e-57 UniRef50_C5EMH8 RecT protein n=3 Tax=Clostridiales RepID=C5EMH8_... 196 6e-49 UniRef50_A8RIH0 Putative uncharacterized protein n=1 Tax=Clostri... 195 1e-48 UniRef50_Q38143 35 protein n=1 Tax=Bacillus phage SPP1 RepID=Q38... 190 3e-47 UniRef50_Q7P5T6 RecT protein n=1 Tax=Fusobacterium nucleatum sub... 184 2e-45 UniRef50_B2JU71 RecT protein n=1 Tax=Burkholderia phymatum STM81... 181 2e-44 UniRef50_UPI00016C62AB recombination and repair protein RecT n=1... 180 3e-44 UniRef50_C9LU62 Protein RecT n=2 Tax=Selenomonas RepID=C9LU62_9FIRM 176 9e-43 UniRef50_C3WEC1 RecT protein n=1 Tax=Fusobacterium mortiferum AT... 170 5e-41 UniRef50_C0W9K5 Recombination and repair protein recT n=1 Tax=Ac... 170 6e-41 UniRef50_A7VTD0 Putative uncharacterized protein n=1 Tax=Clostri... 167 4e-40 UniRef50_C3KZR3 RecT n=1 Tax=Clostridium botulinum Ba4 str. 657 ... 165 1e-39 UniRef50_C0ZFI5 Putative uncharacterized protein n=1 Tax=Breviba... 160 6e-38 UniRef50_C5V0B4 RecT protein n=1 Tax=Gallionella ferruginea ES-2... 156 9e-37 UniRef50_A0QB14 YqaK protein n=4 Tax=root RepID=A0QB14_MYCA1 150 6e-35 UniRef50_C2CG07 Recombination and repair protein RecT n=1 Tax=An... 144 2e-33 UniRef50_A7A5B7 Putative uncharacterized protein n=1 Tax=Bifidob... 140 4e-32 UniRef50_Q2G4T8 Rect protein n=1 Tax=Novosphingobium aromaticivo... 138 2e-31 UniRef50_C0A3T3 Recombinational DNA repair protein (RecE pathway... 132 8e-30 UniRef50_B8IIR3 RecT protein n=3 Tax=Methylobacterium RepID=B8II... 118 2e-25 UniRef50_D2L6Y9 RecT protein n=1 Tax=Desulfovibrio sp. FW1012B R... 105 1e-21 UniRef50_A4XBY1 RecT protein n=1 Tax=Salinispora tropica CNB-440... 102 1e-20 UniRef50_Q854T9 Gp61 n=1 Tax=Mycobacterium phage Che9c RepID=Q85... 101 2e-20 UniRef50_C4VG97 RecT family protein n=19 Tax=root RepID=C4VG97_E... 100 1e-19 UniRef50_C5IHJ8 Gp06 n=2 Tax=unclassified Podoviridae RepID=C5IH... 98 2e-19 UniRef50_C9AMX6 Recombinase n=11 Tax=Enterococcus faecium RepID=... 97 8e-19 UniRef50_C7Q4I7 RecT protein n=1 Tax=Catenulispora acidiphila DS... 95 2e-18 UniRef50_B3WDD8 RecT protein n=3 Tax=Lactobacillus casei group R... 88 2e-16 UniRef50_B3WCF3 RecT protein n=2 Tax=Lactobacillus casei group R... 88 2e-16 UniRef50_A9BYL3 RecT protein n=3 Tax=Burkholderiales RepID=A9BYL... 87 5e-16 UniRef50_Q9AZQ0 RecT n=2 Tax=root RepID=Q9AZQ0_9CAUD 87 6e-16 UniRef50_B6JI05 Rect protein n=1 Tax=Oligotropha carboxidovorans... 84 5e-15 UniRef50_A5N589 Phage-related protein n=16 Tax=Clostridium RepID... 84 6e-15 UniRef50_C5WGX9 RecT protein n=7 Tax=Streptococcus RepID=C5WGX9_... 84 7e-15 UniRef50_C3Q0Z8 RecT family protein n=2 Tax=Bacteroides RepID=C3... 83 9e-15 UniRef50_A9DEN8 DNA recomination protein n=1 Tax=Yersinia phage ... 82 2e-14 UniRef50_B2GBH1 Hypothetical phage protein n=1 Tax=Lactobacillus... 80 7e-14 UniRef50_C8PFI2 Phage recombination protein Bet n=1 Tax=Campylob... 80 8e-14 UniRef50_C0CR08 Putative uncharacterized protein n=1 Tax=Blautia... 79 1e-13 UniRef50_B1KTX5 RecT family protein n=2 Tax=Clostridium botulinu... 79 2e-13 UniRef50_Q3C0K4 RecT protein n=2 Tax=root RepID=Q3C0K4_SODGL 78 3e-13 UniRef50_B3H0V7 Possible phage recombinase n=6 Tax=Proteobacteri... 77 6e-13 UniRef50_Q4QKZ2 Predicted recombinational DNA repair protein, Re... 76 1e-12 UniRef50_C8U7M5 Predicted DNA recombination protein Bet n=14 Tax... 74 5e-12 UniRef50_A1U8M4 RecT protein n=1 Tax=Marinobacter aquaeolei VT8 ... 73 1e-11 UniRef50_B1QU69 RecT family protein n=2 Tax=Clostridium butyricu... 72 3e-11 UniRef50_P45908 Uncharacterized protein yqaK n=15 Tax=root RepID... 72 3e-11 UniRef50_C3X3A2 RecT family protein n=1 Tax=Oxalobacter formigen... 72 3e-11 UniRef50_A8RCV0 Putative uncharacterized protein n=2 Tax=Firmicu... 72 3e-11 UniRef50_Q03VK6 Recombinational DNA repair protein (RecE pathway... 70 1e-10 UniRef50_Q6AC64 Phage recombination protein n=1 Tax=Leifsonia xy... 70 1e-10 UniRef50_A5MYQ8 Phage-related rekombinase protein n=2 Tax=Clostr... 69 1e-10 UniRef50_C9PZW7 RecT family protein n=3 Tax=Bacteroidales RepID=... 67 5e-10 UniRef50_D0AR03 RecT protein n=2 Tax=Enterococcus faecium RepID=... 67 8e-10 UniRef50_C3WER4 Putative uncharacterized protein n=2 Tax=Fusobac... 65 2e-09 UniRef50_C2FKJ7 Recombination protein RecT n=2 Tax=Lactobacillus... 65 3e-09 UniRef50_C7WI33 Prophage Lp1 protein 18 n=11 Tax=Enterococcus Re... 65 3e-09 UniRef50_Q14MJ4 Putative rect protein n=1 Tax=Spiroplasma citri ... 64 4e-09 UniRef50_C4ZCC7 RecT family protein n=1 Tax=Eubacterium rectale ... 63 1e-08 UniRef50_B4AH83 RecT protein n=1 Tax=Bacillus pumilus ATCC 7061 ... 62 2e-08 UniRef50_C0WT85 Putative uncharacterized protein n=1 Tax=Lactoba... 62 2e-08 UniRef50_B1XAU6 RecT protein n=3 Tax=Enterobacteriaceae RepID=B1... 61 3e-08 UniRef50_A8Z301 Possible recombination protein RecT n=32 Tax=roo... 60 7e-08 UniRef50_Q708Q2 Putative uncharacterized protein n=2 Tax=root Re... 60 1e-07 UniRef50_A0M496 RecT family protein n=1 Tax=Gramella forsetii KT... 57 4e-07 UniRef50_C0YSU1 Probable RecT protein n=2 Tax=Flavobacteriaceae ... 57 6e-07 UniRef50_A5VKM2 RecT protein n=8 Tax=Lactobacillus reuteri RepID... 57 7e-07 UniRef50_C7THK4 RecT family protein n=4 Tax=Lactobacillales RepI... 55 2e-06 UniRef50_B7XGP3 DNA recombination protein n=2 Tax=Pseudomonas Re... 55 2e-06 UniRef50_Q14KA3 Putative rect protein n=3 Tax=Spiroplasma citri ... 52 2e-05 UniRef50_C6CX43 RecT protein n=2 Tax=Paenibacillus RepID=C6CX43_... 50 1e-04 UniRef50_Q8L268 DNA recombination protein n=1 Tax=Proteus vulgar... 47 6e-04 UniRef50_Q1CP37 RecT protein n=5 Tax=Streptococcus pyogenes RepI... 46 0.001 UniRef50_C3XHV1 Predicted protein n=1 Tax=Helicobacter bilis ATC... 46 0.002 UniRef50_A6LTW5 RecT protein n=2 Tax=Clostridium RepID=A6LTW5_CLOB8 45 0.004 UniRef50_Q4EN42 RecT protein, putative n=5 Tax=Listeria monocyto... 44 0.007 >UniRef50_P33228 Protein recT n=37 Tax=root RepID=RECT_ECOLI Length = 269 Score = 558 bits (1439), Expect = e-158, Method: Compositional matrix adjust. Identities = 269/269 (100%), Positives = 269/269 (100%) Query: 1 MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIAT 60 MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIAT Sbjct: 1 MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIAT 60 Query: 61 TEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIG 120 TEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIG Sbjct: 61 TEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIG 120 Query: 121 YRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLK 180 YRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLK Sbjct: 121 YRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLK 180 Query: 181 DGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVS 240 DGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVS Sbjct: 181 DGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVS 240 Query: 241 MDEKEPLTIDPADSSVLTGEYSVIDNSEE 269 MDEKEPLTIDPADSSVLTGEYSVIDNSEE Sbjct: 241 MDEKEPLTIDPADSSVLTGEYSVIDNSEE 269 >UniRef50_Q9AKZ0 Putative uncharacterized protein n=1 Tax=Legionella pneumophila RepID=Q9AKZ0_LEGPN Length = 294 Score = 256 bits (655), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 123/225 (54%), Positives = 161/225 (71%), Gaps = 5/225 (2%) Query: 19 RAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFV 78 R+ V+ + Q MK ++A LP+H+T ERM RIA TE+RK P L CD +SF+ Sbjct: 9 RSMMVANQKTVMGLLEQ--MKGEIARCLPKHLTPERMARIAMTELRKTPKLQECDPLSFI 66 Query: 79 SAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLS 138 ++I+Q +QLGLEPG LG YL+PF N K GK + GYRG +DLARRSGQI SL Sbjct: 67 ASIMQAAQLGLEPG-ILGSCYLIPFWNS--KLGKFECTFMPGYRGFLDLARRSGQIVSLV 123 Query: 139 ARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVR 198 AR V E DEFS+EFGL E +IH+P + + VYAVA LKDGG QF+VM++++++ VR Sbjct: 124 ARSVYENDEFSYEFGLKENIIHKPAMDNKGQLIAVYAVAILKDGGHQFDVMSKEEVDTVR 183 Query: 199 SLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDE 243 SK+ +NGPWVTH+EEMAKKT +RRLFK+LP S+E+Q+AVS+DE Sbjct: 184 ETSKSKDNGPWVTHYEEMAKKTVLRRLFKWLPCSVEMQKAVSLDE 228 >UniRef50_C9S1B3 RecT protein n=15 Tax=root RepID=C9S1B3_GEOSY Length = 281 Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 123/231 (53%), Positives = 153/231 (66%), Gaps = 6/231 (2%) Query: 38 MKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGH 97 M ++ ALP+HM A+RM RIA T IR P L C S + A++Q +QLGLEPG +GH Sbjct: 36 MGPEIEKALPKHMDADRMARIALTTIRTNPKLLECSVPSLLGAVMQAAQLGLEPG-LIGH 94 Query: 98 AYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEK 157 YL+PF KN K+G+ +VQ IIGY+GMIDLARRSG I S+ A V D F +E+GL K Sbjct: 95 CYLVPF--KNGKTGQSDVQFIIGYKGMIDLARRSGNIESIYAHAVYSNDTFEYEYGLHPK 152 Query: 158 LIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMA 217 L+H+P YAVA KDGG QFE M +++IE R SKA NNGPWVT +EEMA Sbjct: 153 LVHKPAMTNRGEFIGAYAVAHFKDGGYQFEFMPKEEIEKRRKRSKAANNGPWVTDYEEMA 212 Query: 218 KKTAIRRLFKYLPVSIEIQRAVSMDE--KEPLTIDPADSSVLTGE-YSVID 265 KKT IR ++KYLP+SIEIQ+AV DE K+ +T DP + E Y VID Sbjct: 213 KKTVIRHMWKYLPISIEIQQAVVQDETVKKDITADPEPVDYIEAEAYEVID 263 >UniRef50_C0Q2I7 Rac prophage; recombination and repair protein n=4 Tax=Salmonella enterica RepID=C0Q2I7_SALPC Length = 148 Score = 235 bits (600), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 111/122 (90%), Positives = 117/122 (95%) Query: 58 IATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQL 117 +ATTEIRKVPALG+CDTMSFVSAIVQCSQLGLEPG ALGHAYLL FGN+NEKS KKNVQL Sbjct: 17 VATTEIRKVPALGDCDTMSFVSAIVQCSQLGLEPGGALGHAYLLAFGNRNEKSSKKNVQL 76 Query: 118 IIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVA 177 IIGYRGMIDLARRSGQIASLSARVVRE D+FSFEFGL+EKL+HRPGENEDA VTHVYAVA Sbjct: 77 IIGYRGMIDLARRSGQIASLSARVVREDDDFSFEFGLEEKLVHRPGENEDAQVTHVYAVA 136 Query: 178 RL 179 RL Sbjct: 137 RL 138 >UniRef50_A9I8T0 Phage-related DNA recombination protein n=11 Tax=Proteobacteria RepID=A9I8T0_BORPD Length = 399 Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 114/242 (47%), Positives = 159/242 (65%), Gaps = 13/242 (5%) Query: 37 SMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALG 96 S K LAA LP+H++A+RM++IA +R P L NC S + +VQCSQLGLEP + LG Sbjct: 17 SQKGTLAAVLPKHVSADRMLKIALGAMRTTPKLMNCTLESLLGGVVQCSQLGLEPNTPLG 76 Query: 97 HAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDE 156 HAYL+PF N+ + G VQ+++GY+G+IDL+RRSGQ+ S++A V E D+F + +GLDE Sbjct: 77 HAYLIPFDNR--RKGITEVQIVLGYKGLIDLSRRSGQVVSIAAHEVCENDKFDYAYGLDE 134 Query: 157 KLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLS--------KAGNNGP 208 +L HRP +E V YAVA+LKDGG FEVM+R Q+E + S KAG+ Sbjct: 135 RLDHRPAMDERGKVIAFYAVAKLKDGGHAFEVMSRAQVEKICDESQNYKFAKDKAGS--V 192 Query: 209 WVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPA-DSSVLTGEYSVIDNS 267 W H+ EM +KT +RRLFKYLPVSIE+ A ++D+ + D + + GE++VI Sbjct: 193 WGQHFVEMGRKTVLRRLFKYLPVSIEMATAAALDDLNARGVSQELDINTIDGEFTVIPTG 252 Query: 268 EE 269 +E Sbjct: 253 DE 254 >UniRef50_A6LN18 RecT protein n=2 Tax=Bacteria RepID=A6LN18_THEM4 Length = 300 Score = 224 bits (571), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 114/235 (48%), Positives = 152/235 (64%), Gaps = 6/235 (2%) Query: 9 KADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPA 68 KA LQK G + PA K + + I + M+ Q+ ALP+H+ ER RI TE+RK P Sbjct: 8 KAQLQKKGGTKPPA--KGNTLADLIKK--MEPQIKRALPKHLNVERFTRIILTEVRKNPK 63 Query: 69 LGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLA 128 L +CD MSF++A++ +QLGLEPGS LG AY++P+ N+ K GK Q +GY+G+IDL Sbjct: 64 LLDCDPMSFMAAMMTAAQLGLEPGSHLGQAYIIPYYNR--KLGKTLAQFQLGYKGIIDLF 121 Query: 129 RRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEV 188 RS Q ++ A V E DEF FE+GL KL H+P N V YAVA LKDGG F V Sbjct: 122 YRSEQALNIDAHEVCENDEFEFEYGLHPKLYHKPSLNGRGKVIAYYAVAHLKDGGYSFMV 181 Query: 189 MTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDE 243 M+ IE +R SK N GPW+T ++ MAKKT I++L KY+P+S+E+QR +S DE Sbjct: 182 MSVDDIEKIRKRSKTPNEGPWITDYDAMAKKTVIKQLLKYMPLSVELQRKLSTDE 236 >UniRef50_B9EBP3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EBP3_MACCJ Length = 276 Score = 223 bits (568), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 114/241 (47%), Positives = 154/241 (63%), Gaps = 12/241 (4%) Query: 38 MKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGH 97 M +A ALP+HM +R+ R+A T IR PAL + D S + A++Q +QLGLEPG +GH Sbjct: 35 MAPAMAQALPKHMDIDRLTRLAMTTIRTTPALKDADVGSLLGAVMQAAQLGLEPG-LMGH 93 Query: 98 AYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEK 157 YLLPF NKN+ G K VQ IIGY+GMIDLARRSG I S+ A V DEF +E GL+ K Sbjct: 94 CYLLPFNNKNK--GIKEVQFIIGYKGMIDLARRSGHIKSIYAHAVYSNDEFDYELGLESK 151 Query: 158 LIHRPG-ENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNN--GPWVTHWE 214 L+H+P E + YAVA KDGG QFE M++ IE + SKA N+ PW + +E Sbjct: 152 LVHKPTMEPDKGEFIGAYAVAHFKDGGYQFEFMSKADIEKRKGRSKAANSKFSPWTSDYE 211 Query: 215 EMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTID------PADSSVLTGEYSVIDNSE 268 EMAKKT +R ++KYLP+S+E+Q+ V+ DE I P D+ + +Y ++D ++ Sbjct: 212 EMAKKTVVRHMWKYLPISVEVQQQVAYDEGTGKDISKIKDVTPDDTLLEAPDYELLDITD 271 Query: 269 E 269 E Sbjct: 272 E 272 >UniRef50_C5EMH8 RecT protein n=3 Tax=Clostridiales RepID=C5EMH8_9FIRM Length = 280 Score = 196 bits (499), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 93/223 (41%), Positives = 141/223 (63%), Gaps = 9/223 (4%) Query: 24 VKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQ 83 KN ++ + +++ ++ ALP +T ER R+A + I PAL +C MSF++A++ Sbjct: 36 TKNMTIVDMVK--ALEPEIRRALPAVLTPERFTRMALSAINNTPALADCTPMSFIAAMMN 93 Query: 84 CSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVR 143 +QLGLEP + LG AY++P+ NK G Q +GY+GMIDLA R+GQ+ + A++VR Sbjct: 94 AAQLGLEPNTPLGQAYMIPYKNK----GVLECQFQLGYKGMIDLAYRTGQVQMIQAQIVR 149 Query: 144 EGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELV---RSL 200 E D F +++GL+ KL+HRPGEN+ +T +Y + RL +GG FEV + ++ S Sbjct: 150 EYDYFEYQYGLEPKLVHRPGENDRGEITFIYGLFRLINGGYGFEVSNKADMDAFAAKYSK 209 Query: 201 SKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDE 243 S PW ++E+MAKKT I+R KY PVS + Q+A+SMDE Sbjct: 210 SFGSRYSPWTENYEDMAKKTVIKRALKYAPVSADFQKALSMDE 252 >UniRef50_A8RIH0 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RIH0_9CLOT Length = 266 Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 92/223 (41%), Positives = 139/223 (62%), Gaps = 9/223 (4%) Query: 24 VKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQ 83 KN ++ + +++ ++ ALP +T ER R+A + I P L C MSF++A++ Sbjct: 23 TKNMTIVDMVK--ALEPEIRRALPAVLTPERFTRMALSSINNTPELAECTPMSFIAALLN 80 Query: 84 CSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVR 143 +QLGLEP + LG AYL+P+ NK GK Q +GY+G+IDLA R+GQ+ + A+VVR Sbjct: 81 AAQLGLEPNTPLGQAYLIPYKNK----GKLECQFQLGYKGLIDLAYRTGQVQIIQAQVVR 136 Query: 144 EGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELV---RSL 200 E D F +++GLD KL+H+PGE +T+VY + +L +GG FEV + +++ S Sbjct: 137 EFDSFEYQYGLDSKLVHKPGEGARGEITYVYGLFKLSNGGYGFEVSNKTEMDTFAARYSK 196 Query: 201 SKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDE 243 S PW +E MAKKT I+R+ KY P+S + Q+A+SMDE Sbjct: 197 SFGSKYSPWTEDYESMAKKTVIKRVLKYAPISSDFQKALSMDE 239 >UniRef50_Q38143 35 protein n=1 Tax=Bacillus phage SPP1 RepID=Q38143_BPSPP Length = 287 Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 95/218 (43%), Positives = 146/218 (66%), Gaps = 17/218 (7%) Query: 36 PSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSAL 95 P++K+ LP+H+ A+R+ RIA IR P L CDT S + A+++ ++LG+EPG L Sbjct: 40 PAIKD----VLPKHLDADRLSRIAMNVIRTNPKLLECDTASLMGAVLESAKLGVEPG-LL 94 Query: 96 GHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLD 155 G AY+LP+ N +K+ + Q I+GY+G++DL RRSG ++++SA+ V + D F +E+GLD Sbjct: 95 GQAYILPYTNYKKKTVE--AQFILGYKGLLDLVRRSGHVSTISAQTVYKNDTFEYEYGLD 152 Query: 156 EKLIHRP---GENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVR-SLSKAGNN----- 206 +KL+HRP G + PV + YAVA++KDGG F VM+++ +E R + SK+ N Sbjct: 153 DKLVHRPAPFGTDRGEPVGY-YAVAKMKDGGYNFLVMSKQDVEKHRDAFSKSKNREGVVY 211 Query: 207 GPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEK 244 GPW H++ MAKKT +R+L YLP+S+E V+ DE+ Sbjct: 212 GPWADHFDAMAKKTVLRQLINYLPISVEQLSGVAADER 249 >UniRef50_Q7P5T6 RecT protein n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P5T6_FUSNV Length = 301 Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 93/230 (40%), Positives = 139/230 (60%), Gaps = 7/230 (3%) Query: 40 EQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAY 99 +Q A ALP+H+ ++R +RIA T IR P L C S + A++ +QLGLEPG+ LG Y Sbjct: 37 KQFATALPKHINSDRFVRIAITTIRLNPKLAKCSQESLLGALMVSAQLGLEPGT-LGQCY 95 Query: 100 LLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLI 159 L+PF NK K+G Q IGY+G+I+L RRSGQ++ + + V E D+F+ E+GL L+ Sbjct: 96 LIPFENK--KAGTVECQFQIGYKGLIELLRRSGQLSDIYSYTVYENDDFNIEYGLSRTLV 153 Query: 160 HRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGN--NGPWVTHWEEMA 217 H+P + + YAVA LKDG FE MT+ ++ + G+ N W ++EEMA Sbjct: 154 HKPNFTDRGEIKGFYAVAILKDGAKAFEYMTKDEVVKHEEKYRKGSYKNDVWNKNFEEMA 213 Query: 218 KKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDNS 267 +KT +++L K+LPVS+E + DEK +D D S E +++N+ Sbjct: 214 QKTVVKKLLKWLPVSVEFLEMAAKDEKSFKVVD--DKSTEVQEIEILENN 261 >UniRef50_B2JU71 RecT protein n=1 Tax=Burkholderia phymatum STM815 RepID=B2JU71_BURP8 Length = 351 Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 103/268 (38%), Positives = 156/268 (58%), Gaps = 25/268 (9%) Query: 21 PAAVKNSDVISFINQPSMKEQLAAALPRH-MTAERMIRIATTEIRKVPALGNCDTMSFVS 79 PA +K ++++ + + K+ +AA LP +T +R+ ++A PAL C+ S V+ Sbjct: 17 PATLKPKELLAHMLERKRKD-IAAMLPSGPLTVDRLFKLAIVAATTTPALAKCEIASVVA 75 Query: 80 AIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKN------VQLIIGYRGMIDLARRSGQ 133 A+ C+QLGLEP + LGHAYL+PF N K G N VQ+IIGYRG I+LARRSGQ Sbjct: 76 AVGFCAQLGLEPNTPLGHAYLVPF-NTKRKDGNGNEYWVNSVQVIIGYRGYIELARRSGQ 134 Query: 134 IASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQ 193 I S++A VRE D+F++ +GL EKL H P + + YAVA K GG FE M Q Sbjct: 135 IVSITAHEVREKDKFTYAYGLREKLDHIPARGDRGEIIGFYAVAMFKGGGHAFEFMDVAQ 194 Query: 194 IELVRSLSKAGNNG---------PWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEK 244 I +R S+ PW H+ EM +K+AIRR+ K+LP+++++ +A + D + Sbjct: 195 INEIRDGSQGWQQAQKYKKTATHPWQKHFVEMGRKSAIRRIAKFLPLTVQLTQAFAADGR 254 Query: 245 EPLTIDPA----DSSVLTGEYSVIDNSE 268 TI+ A D + + G++S + + + Sbjct: 255 ---TINDAPQLNDPNTIDGDFSWVPDGD 279 >UniRef50_UPI00016C62AB recombination and repair protein RecT n=1 Tax=Clostridium difficile ATCC 43255 RepID=UPI00016C62AB Length = 277 Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 99/233 (42%), Positives = 147/233 (63%), Gaps = 17/233 (7%) Query: 38 MKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGH 97 M Q+ ALP +++ER R+A T P L +C+ MSF++A+++ +QLGLEP + LG Sbjct: 35 MASQIKKALPSMVSSERFQRVALTAFSNNPRLQSCEPMSFIAAMMESAQLGLEPNTPLGQ 94 Query: 98 AYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEK 157 AYL+P+GNK VQ IGY+G+++LA+RSG+I ++ A +RE D+F ++GL + Sbjct: 95 AYLIPYGNK--------VQFQIGYKGLLELAQRSGKIKTIYAHKIRENDKFEIKYGLHQD 146 Query: 158 LIHRPGENED-APVTHVYAVARLKDGGTQFEVMTRKQ-IELVRSLSKAGNNGPWVTHWEE 215 L+H P N D + YAV L GG F MT+++ IE +S SK+ ++GPW T ++ Sbjct: 147 LVHEPKLNGDRGEIIGYYAVYHLDTGGHSFSFMTKEEIIEFAKSKSKSYSSGPWQTDFDS 206 Query: 216 MAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDNSE 268 MAKKT I++L KY P+SIE+Q+A+ DE ID D S+ V+D SE Sbjct: 207 MAKKTVIKQLLKYAPLSIELQKAMVGDETIKSEID-EDMSM------VVDESE 252 >UniRef50_C9LU62 Protein RecT n=2 Tax=Selenomonas RepID=C9LU62_9FIRM Length = 303 Score = 176 bits (445), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 89/211 (42%), Positives = 126/211 (59%), Gaps = 8/211 (3%) Query: 37 SMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALG 96 SM+ Q+A ALP +T ER R+ T + L C SF+ A++Q +QLG+EP + LG Sbjct: 32 SMEGQIAKALPSVLTPERFTRMVLTALSTNQKLRECTPQSFLGAMMQAAQLGVEPNTPLG 91 Query: 97 HAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDE 156 AYL+P+ NK G Q +GY+G++DLA RSG++ + A V E D F +E GL+ Sbjct: 92 QAYLIPYKNK----GILECQFQLGYKGLLDLAYRSGEVTIIQAHEVYENDVFEYELGLEP 147 Query: 157 KLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIE-LVRSLSKA---GNNGPWVTH 212 KL H P E VTH YA+ + K GG F VM+R +++ R S+A G + PW T+ Sbjct: 148 KLRHVPTTGEKGAVTHYYAMFKTKSGGYGFHVMSRAEVDTFARKYSQAYKKGYSTPWTTN 207 Query: 213 WEEMAKKTAIRRLFKYLPVSIEIQRAVSMDE 243 ++EMAKKT ++ KY P+ E RA+S DE Sbjct: 208 FDEMAKKTVLKACLKYAPIKTEFTRALSTDE 238 >UniRef50_C3WEC1 RecT protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEC1_FUSMR Length = 327 Score = 170 bits (430), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 87/211 (41%), Positives = 127/211 (60%), Gaps = 8/211 (3%) Query: 39 KEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHA 98 ++Q AAALP+H+ +ER RIA T IR+ P L C+ S + +++ +QLGLEPG LG Sbjct: 36 EKQFAAALPKHLNSERFTRIAITTIRQNPKLAECNAESLLGSLMTIAQLGLEPG-VLGQC 94 Query: 99 YLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKL 158 YL+PF KN K G Q +GY+GMI+L RR+GQ++ + A V DEF E+GLD L Sbjct: 95 YLIPF--KNNKLGTIECQFQLGYKGMIELLRRTGQLSDIYAYTVYSNDEFDIEYGLDRTL 152 Query: 159 IHRPGENE---DAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGN--NGPWVTHW 213 H+P + Y+VA LKDG FE MT+K++ + GN N W ++ Sbjct: 153 KHKPAFTNPEGRGEIVGFYSVAILKDGTRAFEYMTKKEVIEHEEKYRKGNFKNEIWNKNF 212 Query: 214 EEMAKKTAIRRLFKYLPVSIEIQRAVSMDEK 244 EEM+ KT +++ K+LP+S+E+ + DE+ Sbjct: 213 EEMSLKTVTKKMLKWLPISVEMIENLRKDEQ 243 >UniRef50_C0W9K5 Recombination and repair protein recT n=1 Tax=Acidaminococcus sp. D21 RepID=C0W9K5_9FIRM Length = 290 Score = 170 bits (430), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 96/210 (45%), Positives = 128/210 (60%), Gaps = 7/210 (3%) Query: 37 SMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALG 96 SM+ Q+ AALP +T ER R+ T + P L C SF+ A++Q +QLG+EP + LG Sbjct: 28 SMEPQIKAALPSILTPERFTRMVLTALSSNPKLQECSPQSFLGAMMQAAQLGVEPNTPLG 87 Query: 97 HAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDE 156 AYL+P+ N G Q +GY+G+IDLA RSG I +SA VV GD F FE+G + Sbjct: 88 QAYLIPYRNH----GILECQFQLGYKGLIDLAYRSGSIRDISAHVVYSGDGFEFEYGFEP 143 Query: 157 KLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRS-LSKAGNNG--PWVTHW 213 KLIH+P + YAV KDGG F VM+++ IE R+ SKA G PW T++ Sbjct: 144 KLIHKPAMTDRGTPIAYYAVYHTKDGGGNFVVMSQEDIEKHRNKFSKAAGQGFSPWGTNF 203 Query: 214 EEMAKKTAIRRLFKYLPVSIEIQRAVSMDE 243 EEMAKKT +++L KY P+ E RAV+ DE Sbjct: 204 EEMAKKTVLKKLLKYAPLKTEFVRAVATDE 233 >UniRef50_A7VTD0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTD0_9CLOT Length = 276 Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 100/242 (41%), Positives = 142/242 (58%), Gaps = 18/242 (7%) Query: 12 LQKTQGNR--APAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPAL 69 +QK N+ A A +S + ++I + M+ ++ ALP MT ER RI + + P L Sbjct: 4 IQKNVENQELARKAPHDSTMQNYIKK--MEGEIKKALPSVMTPERFTRITLSALSTNPKL 61 Query: 70 GNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLAR 129 G SF+ A++ +QLGLEP + LG AYL+PF N +K + Q IGY+G+IDLA Sbjct: 62 GETTPNSFLGAMMTAAQLGLEPNTPLGQAYLIPFYNGKKK--QLECQFQIGYKGLIDLAY 119 Query: 130 RSGQIASLSARVVREGDEFSFEFGLDEKLIHRP--GENEDAPVTHVYAVARLKDGGTQFE 187 RSG+I+S+ A V E DEF F FGL+ KL H P G ++ P YA ++KDGG FE Sbjct: 120 RSGEISSIQAHTVYENDEFEFAFGLEPKLKHVPYKGTDKGEPA-WFYAAFKMKDGGFGFE 178 Query: 188 VMTRKQIELVR------SLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSM 241 VM+ ++ VR S S +G+ PW T +EEMAKKT +++ KY P+ + RA + Sbjct: 179 VMS---VDDVRAHANKYSQSYSGDYSPWKTAFEEMAKKTVLKKALKYAPMKSDFVRASNS 235 Query: 242 DE 243 DE Sbjct: 236 DE 237 >UniRef50_C3KZR3 RecT n=1 Tax=Clostridium botulinum Ba4 str. 657 RepID=C3KZR3_CLOB6 Length = 294 Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 129/215 (60%), Gaps = 10/215 (4%) Query: 38 MKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGH 97 M ++ A+ + MT ER RIA + P DT SF+SA++Q +Q GLEP + LG Sbjct: 33 MLPEIKKAVGKTMTPERFSRIALSLFNGNPQFWEADTTSFLSALMQSAQCGLEPNTVLGE 92 Query: 98 AYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEK 157 AY++P+ KN K G V +GY+G++ +A +G+ ++ A VR+GDEF +E+GL + Sbjct: 93 AYVIPY--KNNKQGITEVNFQVGYKGILKMAFNTGEYEAIYAHEVRKGDEFEYEYGLHKT 150 Query: 158 LIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQI-----ELVRSLSKAGN---NGPW 209 L+H+P + VTH YAV +LK+GG F V +R+++ E ++ + GN N W Sbjct: 151 LVHKPADIPSDEVTHYYAVYKLKNGGFDFVVWSRERVEHHAREFSKNYTYKGNVNKNSVW 210 Query: 210 VTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEK 244 +++ MAKKT + + KY P S+E+ +A+ MD K Sbjct: 211 AKNFDSMAKKTVLLDVLKYAPKSVEMAKALDMDYK 245 >UniRef50_C0ZFI5 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZFI5_BREBN Length = 314 Score = 160 bits (404), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 87/241 (36%), Positives = 126/241 (52%), Gaps = 40/241 (16%) Query: 40 EQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAY 99 + + + +P+HMT ER+ RI T I + PAL +C S V A++ C+ LGLEP + +GHAY Sbjct: 40 QAIKSLVPKHMTPERLARITLTAISRTPALIDCTPASIVGAVMNCATLGLEP-NLIGHAY 98 Query: 100 LLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLI 159 L+PF KN ++ + Q IGY+G IDL RR+G ++ + A V E D F + G D++L+ Sbjct: 99 LVPF--KNNRTKQMECQFQIGYKGQIDLIRRTGDVSKIYAETVYENDLFIYIKGEDKRLV 156 Query: 160 HRP--------------------------------GENEDAPVTHVYAVARLKDGGTQFE 187 H P G N+ Y+ RLKDG F Sbjct: 157 HVPFDMLHHLENFTPSKDDFMDIMMAQAIGAIKSRGANDQGKPVRYYSAYRLKDGAFDFV 216 Query: 188 VMTRKQIE---LVRSLSKAGNN--GPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMD 242 MT +Q + + S +K GPW H+E M KKT I+ + KY+P+SIE+Q +S D Sbjct: 217 TMTAEQCQKHAMTHSAAKKDGKLVGPWKDHFESMCKKTCIKEMAKYMPISIEVQEKLSTD 276 Query: 243 E 243 E Sbjct: 277 E 277 >UniRef50_C5V0B4 RecT protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0B4_9PROT Length = 350 Score = 156 bits (394), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 97/254 (38%), Positives = 136/254 (53%), Gaps = 37/254 (14%) Query: 36 PSMKEQLAA----ALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEP 91 P+M EQ ALP+H+ +RM+RIA T R P L +CD S +A++Q SQLGLE Sbjct: 26 PAMLEQFKGEITRALPKHINPDRMVRIALTAFRMTPKLADCDPRSVFAAVIQSSQLGLEV 85 Query: 92 GSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFE 151 G +G A+L+PFG + QLI GY G++ LAR+SG + + A VR D+F+ + Sbjct: 86 G-LMGEAHLVPFGGQ--------CQLIPGYTGLMKLARQSGLVIDIYAEAVRINDKFALK 136 Query: 152 FGLDEKLIHRP---------GENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLS- 201 G++ L H P + E V YAV LKDG F M RK++E +R S Sbjct: 137 LGMERNLEHEPLTAPGGFPASDEERGDVVGFYAVGVLKDGSRTFVAMGRKEVERIRDGSR 196 Query: 202 ------KAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDE---KEPLTIDPA 252 K W T + M KTAIRR+ K+LP S E+ A++MDE ++ L +D Sbjct: 197 GYQAAKKYKKESTWDTDFVAMGLKTAIRRICKFLPKSPELATALAMDEQAGRQNLNLD-- 254 Query: 253 DSSVLTGEYS-VID 265 V+ G Y+ V+D Sbjct: 255 --DVINGSYTPVVD 266 >UniRef50_A0QB14 YqaK protein n=4 Tax=root RepID=A0QB14_MYCA1 Length = 370 Score = 150 bits (378), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 90/222 (40%), Positives = 127/222 (57%), Gaps = 19/222 (8%) Query: 38 MKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPG-SALG 96 M++Q A+PR + A +++R A T ++ P L C+ S + A++ C+QLGL PG S LG Sbjct: 29 MEQQFQLAMPRGVEAVQLVRDALTCLQSNPKLAECEHKSVLGALMTCAQLGLRPGVSVLG 88 Query: 97 HAYLLPFGNKNEK-----SGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFE 151 AYLLPF +KN + G QL+IGY+G ++LA RSG+IASL AR V D F E Sbjct: 89 QAYLLPFWDKNLERPNGGKGGFRAQLVIGYQGYVELAYRSGRIASLHARRVYANDYFEIE 148 Query: 152 FG-LDEKLIHRPGENEDAP---VTHVYAVARLKDGGTQF-EVMTRKQIELVRSLSKAGNN 206 +G ++K +HRP D P V YAV R DGG + + ++ ++ R + Sbjct: 149 YGAAEDKWVHRP--YLDGPRGDVKLYYAVGRTVDGGYRITDPVSVADMQAYRDRHATAKD 206 Query: 207 ------GPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMD 242 GPWV H++ MA KT IR L K LP S E Q+A++ D Sbjct: 207 RNGKVVGPWVDHFDAMADKTMIRTLMKLLPKSTEQQQAIAHD 248 >UniRef50_C2CG07 Recombination and repair protein RecT n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CG07_9FIRM Length = 297 Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 89/261 (34%), Positives = 141/261 (54%), Gaps = 22/261 (8%) Query: 8 AKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVP 67 AK L+K N+ PA K V + SMK ++ ALP ++ E+ +R A T I P Sbjct: 4 AKNALKKNTQNK-PALSKQDTVRGLL--MSMKGEIQNALPSYLPVEKFVRTALTAINSNP 60 Query: 68 ALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDL 127 L NC S ++AI+ +QLGLE + LG AYL+P+G+ V IGY+G++ L Sbjct: 61 KLANCTQQSLLAAIMNSAQLGLEFNTPLGEAYLIPYGS--------TVNFQIGYKGLLKL 112 Query: 128 ARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDA-PVTHVYAVARLKDGGTQF 186 A +GQ ++AR VR ++F+ ++G E + H+P D+ V YA+ + KDGG Sbjct: 113 AYNTGQFKRITAREVRGNEDFAIDYGTGE-ISHKPCLTGDSGEVIGYYAIYQTKDGGQDV 171 Query: 187 EVMTRKQIELV-RSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKE 245 M++ E ++ SK+ +GPW T ++ MAKK+ + ++ KY P +IE Q + + Sbjct: 172 FYMSKADAERYGKTYSKSFYSGPWKTDFDSMAKKSCLIQVLKYAPKAIESQGLI-----Q 226 Query: 246 PLTIDPADSSVLTGEYSVIDN 266 ++ D A+ TG +DN Sbjct: 227 AMSFDNAN---FTGSQKTVDN 244 >UniRef50_A7A5B7 Putative uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5B7_BIFAD Length = 287 Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 84/222 (37%), Positives = 122/222 (54%), Gaps = 20/222 (9%) Query: 41 QLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGS--ALGHA 98 Q+A + ++ +E ++++ + I + PAL +C +S +S +QC+ LGL P LG A Sbjct: 32 QIARVIGGNLDSEALLQMCISSINRTPALADCTPVSVLSCFMQCAALGLRPSDVDGLGQA 91 Query: 99 YLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEK- 157 Y+LP+GNKN +G+K +IGY+GM+ L SG A R V E D + LDE Sbjct: 92 YILPYGNKNYATGEKQATFVIGYKGMLKLLENSGIYAQ--PRAVYEDDNIKLK--LDENG 147 Query: 158 --LIHRPGE-NEDAP-----VTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGN---- 205 I P E N DA + VY +L +GG + M+++ + R N Sbjct: 148 VPTIECPDEVNVDADHSEDKLKFVYLSVQLPNGGRYADYMSKRDLLEYREKYAPRNRSRQ 207 Query: 206 -NGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEP 246 GPWV ++ EMAKKT IRR FKYLPV+IE ++A S+DE P Sbjct: 208 ITGPWVKNFVEMAKKTIIRRSFKYLPVNIEAKKAASVDETTP 249 >UniRef50_Q2G4T8 Rect protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G4T8_NOVAD Length = 294 Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 85/223 (38%), Positives = 122/223 (54%), Gaps = 13/223 (5%) Query: 20 APAAVKNSDV-ISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFV 78 A AA +NS V + N +M + AALP H+T E+ R+A T I P L D S Sbjct: 2 ASAARENSPVAVVKQNLTAMAPEFRAALPAHVTVEKFTRVAQTAILSNPNLMRADRASLF 61 Query: 79 SAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLS 138 +I + +Q GL P A L+ FG + VQ + G++ R+SG++A +S Sbjct: 62 GSITKLAQDGLLPDGR--EAALVMFGQQ--------VQAMPMIAGVLKKIRQSGEVAKIS 111 Query: 139 ARVVREGDEFSFEFGLDEKLIHRPG--ENEDAPVTHVYAVARLKDGGTQFEVMTRKQIEL 196 A+VV E D F +G DE + H P + YA A LKDG EVM+ ++I+ Sbjct: 112 AQVVHENDHFVVSYGFDEDVTHNPPPLDKPRGKAIGAYATAVLKDGSRMLEVMSLEEIDK 171 Query: 197 VRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAV 239 VR++S+AG +GPWV W EMA+KT +RRL K LP+S +++ V Sbjct: 172 VRAVSRAGKSGPWVQWWGEMARKTVMRRLSKRLPMSTDLEEEV 214 >UniRef50_C0A3T3 Recombinational DNA repair protein (RecE pathway)-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A3T3_9BACT Length = 471 Score = 132 bits (333), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 74/217 (34%), Positives = 116/217 (53%), Gaps = 9/217 (4%) Query: 30 ISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGL 89 ++ +P+ +E++ A +P M+ +R R+ T+ I + P L NC+ +SF + + C+ +G+ Sbjct: 14 LTVWAKPTTQEKIKALVPATMSFDRFARLTTSLIHRNPELANCEPVSFFACLSDCATIGV 73 Query: 90 EPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFS 149 P G AYL+P N K K L++GY+G+ +A RS I + VVR GD Sbjct: 74 YPDPVTGQAYLIP--RWNSKKQIKECTLLVGYKGLRTIALRSPDIVDIWTGVVRVGDTLK 131 Query: 150 FEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVR--SLSKAGNN- 206 +++IH P +E V Y+ + L+ GGT +E M + VR +L+K + Sbjct: 132 LIKAPRQEIIHEPLPDEAGEVIGYYSCSSLRGGGTSYEWMPVATVRKVRDEALAKIKEDW 191 Query: 207 ----GPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAV 239 PWVT EEM +KT +RR FK LP+ E Q AV Sbjct: 192 KREQSPWVTWEEEMGRKTVLRRHFKSLPLRPEDQEAV 228 >UniRef50_B8IIR3 RecT protein n=3 Tax=Methylobacterium RepID=B8IIR3_METNO Length = 320 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/192 (38%), Positives = 106/192 (55%), Gaps = 12/192 (6%) Query: 37 SMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALG 96 S + + AAALP H+ ER RI T ++ P L + SF +A ++ +Q GL P G Sbjct: 26 SREAEFAAALPAHIPVERFKRILLTAVQNNPDLLKLERRSFFNAAMRAAQDGLLPDGREG 85 Query: 97 HAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDE 156 ++ F + + + +I G R + R SG++++ A VV E DEF ++ G D Sbjct: 86 --AIVEFNGRAQW-----MPMIAGIRKKV---RNSGEVSTWEANVVFENDEFEYQLGDDP 135 Query: 157 KLIHRPG-ENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEE 215 K+IHRP N P+ Y++A LK G EVMT ++IE VR +S+A N GPW WEE Sbjct: 136 KIIHRPALVNRGKPIA-AYSIAVLKSGERSREVMTVEEIEKVRKVSRARNGGPWSQWWEE 194 Query: 216 MAKKTAIRRLFK 227 MA+KT RR K Sbjct: 195 MARKTVARRHSK 206 >UniRef50_D2L6Y9 RecT protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L6Y9_9DELT Length = 324 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 78/221 (35%), Positives = 109/221 (49%), Gaps = 28/221 (12%) Query: 48 RHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKN 107 R AER R+A T IR L C S + A++ + L LE G AYL+P+G Sbjct: 38 RQKRAERFARVALTTIRNNDKLAQCRVESLLGALMTSASLNLEI-DPRGLAYLIPYG--- 93 Query: 108 EKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVR----EGDEFSFEFGLDEKLIH--- 160 + QL IGY+G+ +LA R+G I ++ A VV E F+ E GL L H Sbjct: 94 -----REAQLQIGYKGIKELAYRAGGIKAIYAEVVYKPEVEAGMFTIEIGLSRSLTHKLD 148 Query: 161 --RPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGP---WVTHWEE 215 RP E + + YAVA ++DG F R ++E R SK P W EE Sbjct: 149 PLRP-ELRNGDLVLAYAVAEMEDGRRHFAYCLRDEVEKRRKTSKMNTASPDSTWGKWAEE 207 Query: 216 MAKKTAIRRLFKYLPVSIE--IQRAVSMDEKE----PLTID 250 M +KTA+++L K LP S E + +AV++D++ P T D Sbjct: 208 MWRKTAVKKLCKDLPQSTEDAMAKAVALDDQAEAGVPQTFD 248 >UniRef50_A4XBY1 RecT protein n=1 Tax=Salinispora tropica CNB-440 RepID=A4XBY1_SALTO Length = 299 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 70/232 (30%), Positives = 120/232 (51%), Gaps = 25/232 (10%) Query: 23 AVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRK----------VPALGNC 72 A +++ I Q S E A LP H+ +R+A +++ + + Sbjct: 10 ATRDNSPAGLITQYS--ESFAQVLPSHIKPATWVRLAQGALKRGKRGDGGRFELEIAASN 67 Query: 73 DTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSG 132 + F++A++ ++ GLEPG+ YL P K G+ + I GY+G I+L R+G Sbjct: 68 NPGVFLAALLDAARQGLEPGTE--QYYLTPRKVK----GRLEILGITGYQGHIELMYRAG 121 Query: 133 QIASLSARVVREGDEFSFEFGLDEKLIHR----PGENEDAPVTHVYAVARLKDGGTQFEV 188 +AS+ A +VRE DE+ ++ G+D+ +HR + E + VYA AR+KDG V Sbjct: 122 AVASVVAEIVREHDEYRYQRGIDDVPVHRYKPFARDAERGALIGVYAYARMKDGAVSRVV 181 Query: 189 -MTRKQIELVRSLSKAGNN--GPWVTHWEEMAKKTAIRRLFKYLPVSIEIQR 237 ++R I+ +++ S+ N+ PW H M K+A+R+L K++P S E +R Sbjct: 182 ELSRDDIDRIKASSQGANSEYSPWQKHEAAMWLKSAVRQLQKWVPTSAEFRR 233 >UniRef50_Q854T9 Gp61 n=1 Tax=Mycobacterium phage Che9c RepID=Q854T9_9CAUD Length = 353 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 109/214 (50%), Gaps = 14/214 (6%) Query: 41 QLAAALPRHMTAERMIRIATTEIRKV----------PALGNCDTMSFVSAIVQCSQLGLE 90 QLA A+P+ M +R+ RI TEIRK +L +C SF A++ + LGLE Sbjct: 28 QLARAVPKGMDPDRIARIVQTEIRKSRNAKAAGIAKQSLDDCTQESFAGALLTSAALGLE 87 Query: 91 PGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSF 150 PG G YL+P+ ++ + G QLIIGY+G++ L + + + + A+ V DEF + Sbjct: 88 PG-VNGECYLVPY--RDTRRGVVECQLIIGYQGIVKLFWQHPRASRIDAQWVGANDEFHY 144 Query: 151 EFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWV 210 GL+ L H + + + YA+ + ++V T +I +R K G++G Sbjct: 145 TMGLNPTLKHVKAKGDRGNPVYFYAIVEVTGAEPLWDVFTADEIRELRR-GKVGSSGDIK 203 Query: 211 THWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEK 244 M +KTA++++ K P + + A+ D++ Sbjct: 204 DPQRWMERKTALKQVLKLAPKTTRLDAAIRADDR 237 >UniRef50_C4VG97 RecT family protein n=19 Tax=root RepID=C4VG97_ENTFA Length = 297 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/240 (30%), Positives = 114/240 (47%), Gaps = 11/240 (4%) Query: 13 QKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNC 72 Q +Q N+ + +N P+MK + L H A + T + L Sbjct: 10 QLSQQNQKQVPANQLGLKGLMNTPTMKRKFEEVL--HENANAFMSNVMTLVSNDSYLAES 67 Query: 73 DTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGK--KNVQLIIGYRGMIDLARR 130 + MS +S + + L L LG+AYL+PF KN+++GK + Q I+GY+G I LA+R Sbjct: 68 EPMSILSGALTAATLNLGLDKNLGYAYLVPFNTKNKQTGKWERKAQFILGYKGYIQLAQR 127 Query: 131 SGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMT 190 SG+ +L+ V EG+ S+ L E+ P + V L +G + T Sbjct: 128 SGKYKALNVIEVYEGELLSWN-RLTEEFEFDPNGRQSDDVIGYVGYFELLNGFKKTVYWT 186 Query: 191 RKQIELVR-----SLSKAGNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDEK 244 +++IE R K +G W T + MA+KT +R + K+ +SIE+Q A + DEK Sbjct: 187 KQEIEAHRIANSKDKEKTKLSGVWATDYNAMARKTVLRNMLSKWGILSIEMQEATTSDEK 246 >UniRef50_C5IHJ8 Gp06 n=2 Tax=unclassified Podoviridae RepID=C5IHJ8_9CAUD Length = 342 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/240 (30%), Positives = 118/240 (49%), Gaps = 22/240 (9%) Query: 21 PAAVKNSDVISF---INQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSF 77 PA K + I F +N+ ++ ++ ALP + +R IR T ++ P L + S Sbjct: 11 PAEQKPTPYIEFREKLNR-GIRVEIEKALPPDIDVDRFIRTVLTSVQMNPDLLYANRQSL 69 Query: 78 VSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLI------IGY----RGMIDL 127 ++A ++ +Q GL P G +L N K N +LI + Y RG++ + Sbjct: 70 MNACMRAAQDGLFPD---GREAVLNIYNTKVKVRDGNNRLIEEWVPMVQYLPMVRGILKV 126 Query: 128 ARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRP--GENEDAPVTHVYAVARLKDGGTQ 185 R SG++A++ A V D F F G D ++ H P G+++ PV Y + +L +G + Sbjct: 127 MRNSGEVANIDAAAVYAKDHFRFVRGDDPRIEHEPYLGDDDPGPVVAAYMIVKLSNGEVR 186 Query: 186 FEVMTRKQIELVRSLSK--AGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIE-IQRAVSMD 242 EVM R+ IE R SK G N PW +++MA K I+R K LP S + + R + D Sbjct: 187 REVMPRRDIEKTRLASKNAEGANSPWTKWYDQMAIKGVIKRGAKLLPASSDRLDRVIDHD 246 >UniRef50_C9AMX6 Recombinase n=11 Tax=Enterococcus faecium RepID=C9AMX6_ENTFC Length = 312 Score = 96.7 bits (239), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 69/226 (30%), Positives = 114/226 (50%), Gaps = 19/226 (8%) Query: 31 SFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLE 90 + +N P+M+++ L H A + T + L + + MS +S + + L L Sbjct: 28 ALMNTPTMRKKFEEVL--HDNANAFMSNVMTLVSNDNYLADSEPMSIMSGALTAATLNLG 85 Query: 91 PGSALGHAYLLPFGNKNEKSGK--KNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEF 148 LG+AYL+PF +KN+++GK K Q ++GY+G I LA+RSG+ +L+ V EG+ Sbjct: 86 LDKNLGYAYLVPFNSKNKQTGKWEKKAQFMLGYKGYIQLAQRSGKYKALNVIEVYEGELK 145 Query: 149 SFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNN-- 206 S+ +E G D + +V L +G + T+++IE R GNN Sbjct: 146 SWNRLTEEFEFDPNGRTSDEVIGYV-GYFELLNGFKKTVYWTKQEIEAHR----IGNNKD 200 Query: 207 -------GPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDEK 244 G W + + MA+KT +R L K+ +SIE+Q A + DE+ Sbjct: 201 RDKTKLSGVWASDYNAMARKTVLRNLLSKWGILSIEMQEATTSDER 246 >UniRef50_C7Q4I7 RecT protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q4I7_CATAD Length = 313 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 35/247 (14%) Query: 15 TQGNRAPAAVKNSDVISFINQP-----SMKEQLAAALPRHMTAERMIRIATTEIRK---- 65 T+ A AV D N P S A LP H+ E +R+A ++K Sbjct: 5 TENTTASTAVATRD-----NSPGGMVKSFSADFAMVLPSHIKPETWVRLAQGALKKGKKV 59 Query: 66 ----------VPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNV 115 + N + F+S+++ ++LGLEPG+ YL P K G+ + Sbjct: 60 KLDDGSTRTELEIAANNNPAVFLSSLLDAARLGLEPGTE--QYYLTPRSVK----GQLEI 113 Query: 116 QLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGEN--EDAPVTHV 173 I+GY+G I+L R+G I+S+ A V D F+++ G+ E+ +H + + + V Sbjct: 114 LGIVGYQGYIELMYRAGAISSVVAECVYANDAFTYKPGVHERPLHDIDWDLADRGALRLV 173 Query: 174 YAVARLKDGGT-QFEVMTRKQIELVRSLSKAGNN--GPWVTHWEEMAKKTAIRRLFKYLP 230 YA A + DG T + V+ R I ++ S+ N+ PW TH M K+A+R+L K++P Sbjct: 174 YAYAVMGDGATSKVVVLNRAAILKIKDSSQGANSNYSPWKTHEPAMWLKSAVRQLAKWVP 233 Query: 231 VSIEIQR 237 S E R Sbjct: 234 TSSEYMR 240 >UniRef50_B3WDD8 RecT protein n=3 Tax=Lactobacillus casei group RepID=B3WDD8_LACCB Length = 287 Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 72/238 (30%), Positives = 121/238 (50%), Gaps = 23/238 (9%) Query: 24 VKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQ 83 +K V I ++K + AA L + A + + + + P+L D +S +++ + Sbjct: 7 LKKMPVKKLIETQTIKNKFAALLDKR--APQFLSSIASAVSLNPSLARVDQLSVINSALV 64 Query: 84 CSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVR 143 + L L +LG Y++P+ N+ Q IGY+G I LA+RSG+ L+A + Sbjct: 65 AATLDLPVNPSLGFVYIVPYKNQ--------AQPQIGYKGYIQLAQRSGRYQRLTALPIY 116 Query: 144 EGDEFSFEFGLDEKLIHRPGENE----DAPVTHVYAVARLKDGGTQFEVMTRKQIELVRS 199 E DEF L E+L + P ++ + PV + A +L +G + T +Q++ R Sbjct: 117 E-DEFKSWNPLTEELEYTPNFHDRKASEKPVGYA-ASFKLTNGFEKMVYWTYQQVDDHRK 174 Query: 200 -LSKAGNN----GPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDEKEPLTIDP 251 SK+G + G W ++E MA KT I+ L K+ P++ ++Q AVS DEK P+ DP Sbjct: 175 RFSKSGGSAEPKGVWKDNYEAMALKTVIKSLLTKWGPMTTDMQSAVSADEK-PVEADP 231 >UniRef50_B3WCF3 RecT protein n=2 Tax=Lactobacillus casei group RepID=B3WCF3_LACCB Length = 295 Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 27/255 (10%) Query: 7 IAKADLQKTQGNRAPAAVKNSD---VISFINQPSMKEQLAAALPRHMTAERMIRIATTEI 63 +A LQK + A K+S V ++ P+M+++ L + +A++ + Sbjct: 1 MATTSLQKQLNEVSQAKGKSSAGSVVKDLLSAPAMQKRFNEVLGK--SAQQFTSSIINVV 58 Query: 64 RKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGK--KNVQLIIGY 121 L D MS +S+ + + L L LG+ Y++PF K++ +GK K Q +GY Sbjct: 59 NSSQQLQGVDAMSVISSAMVAATLNLPIDPNLGYMYIVPFNEKDKATGKYLKRAQPQMGY 118 Query: 122 RGMIDLARRSGQIASLSARVVREG-----DEFSFEFGLDEKLIHRPGENEDAPVTHVYAV 176 RG I LA R+GQ S++AR V EG D FS + GE V Sbjct: 119 RGYIQLALRTGQYKSINARAVHEGEITNWDPFS--------ETYERGEKTSDKVVGYVGH 170 Query: 177 ARLKDGGTQFEVMTRKQIELVRSL-SKAGN-----NGPWVTHWEEMAKKTAIRRLF-KYL 229 L +G + T ++++ R L SK+GN +G W ++++ MA KT IR L K+ Sbjct: 171 FELLNGFQKTTYWTVEEMDQHRKLYSKSGNYNGQRSGVWKSNFDAMATKTVIRDLLSKWG 230 Query: 230 PVSIEIQRAVSMDEK 244 +SI++Q AV DEK Sbjct: 231 ILSIQMQDAVVKDEK 245 >UniRef50_A9BYL3 RecT protein n=3 Tax=Burkholderiales RepID=A9BYL3_DELAS Length = 307 Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 14/179 (7%) Query: 66 VPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMI 125 + L D S V+A+ + +G+ A AYL+P + GK + L I Y G+I Sbjct: 46 IAKLAANDRQSVVNAVTNIAAIGISLNPAKKQAYLVP------RKGK--ICLDISYMGLI 97 Query: 126 DLARRSGQIASLSARVVREGDEFSFEFGLDEKLIH--RPGENEDAPVTHVYAVARLKDGG 183 DLA ++G I A +V D F+ G D H P E + Y V + G Sbjct: 98 DLAVQAGSILWAQADLVYASDAFTLN-GFDRPPTHSYNPFSRERGELVGAYVVVKTPSGD 156 Query: 184 TQFEVMTRKQIELVRSLS---KAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAV 239 + M+R++I+ +++ S KAG + PW T + EMAKKT ++R +KY P S + +A+ Sbjct: 157 YLTDCMSREEIDAIKNRSESVKAGKSSPWDTDYGEMAKKTVVKRAYKYWPKSDRLDQAI 215 >UniRef50_Q9AZQ0 RecT n=2 Tax=root RepID=Q9AZQ0_9CAUD Length = 268 Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 13/181 (7%) Query: 69 LGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLA 128 L N D S ++A ++ + L L +LG AY++P+G + Q IGY+G I LA Sbjct: 45 LKNADANSVMTAAMKAATLDLPIEPSLGFAYVIPYG--------REAQFQIGYKGFIQLA 96 Query: 129 RRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEV 188 RSGQ+ L+ +V E S++ L E+L + +A +L +G + Sbjct: 97 LRSGQLTGLNCGIVYESQFVSYD-PLFEELELDFSQQASGDAVGYFASMKLANGFKKVTY 155 Query: 189 MTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIE---IQRAVSMDEK 244 +++Q+ + NGPW H++ MA+KT ++ + KY P SIE IQ A++ D+ Sbjct: 156 WSKEQVLAHKKKFVKSANGPWRDHFDAMAQKTVLKAMLTKYAPASIESKMIQTAITEDDS 215 Query: 245 E 245 E Sbjct: 216 E 216 >UniRef50_B6JI05 Rect protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JI05_OLICO Length = 461 Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 72/233 (30%), Positives = 106/233 (45%), Gaps = 21/233 (9%) Query: 21 PAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSA 80 PA N V F + LP H+ ++++ +A T I++ P L C S +A Sbjct: 26 PAQKSNHPVAVFREYAMQRISTLQELP-HIDPQQLLSVALTAIQRKPDLMRCTPQSLWNA 84 Query: 81 IVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMID----LARRSGQIAS 136 V +Q GL P G ++P+G E + K V I + M++ R SGQI Sbjct: 85 CVLAAQDGLLPDGREG--AIVPYG---ENADGKRVAEIATWMPMVEGLRKKVRNSGQIKD 139 Query: 137 LSARVVREGDEFSFEFGLDEKLIHRP----GENEDAP---VTHVYAVARLKDGG-TQFEV 188 +V GD F + G D +L H P + P + Y++A DG + EV Sbjct: 140 WYVELVYAGDFFRYRKGDDPRLEHEPVPPSQRTPNTPFHGIVAAYSIAVFTDGSKSAPEV 199 Query: 189 MTRKQIELVRSLSKAGNNGPW--VTHWEEMAKKTAIRRLFKYLPVSIEIQRAV 239 M ++IE VR+ SKA NGPW + EM KK RR +K LP S + + + Sbjct: 200 MWIEEIEKVRTKSKA-KNGPWQDSAFYPEMCKKVVARRHYKQLPHSAGMDKLI 251 >UniRef50_A5N589 Phage-related protein n=16 Tax=Clostridium RepID=A5N589_CLOK5 Length = 268 Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 15/204 (7%) Query: 45 ALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFG 104 ALP+ R ++ T ++ + C +S +++ + LGL+ + Y +P+ Sbjct: 26 ALPKDFNKSRFLQNCMTVLQDTKDIDKCQPISVARTMLKGAFLGLDFFNR--ECYAIPYN 83 Query: 105 NKNEKSGKKNVQLIIGYRGMIDLARRS--GQIASLSARVVREGDEFSFEFGLDEKLIH-R 161 N+Q Y+G I LA++ I + A+VVR+GDEF + ++ + Sbjct: 84 G--------NLQFQTDYKGEIKLAKKYSINPIKDIYAKVVRKGDEFQESIVNGHQTVNFK 135 Query: 162 PGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRS-LSKAGNNGPWVTHWEEMAKKT 220 P + + +AV +DG +E MT+++IE +R+ SKA N+ WV EM KKT Sbjct: 136 PLPFNNDEIIGAFAVCLFQDGSMIYETMTKQEIEDIRNNFSKAKNSPAWVKTPGEMYKKT 195 Query: 221 AIRRLFKYLPVSIE-IQRAVSMDE 243 +RRL K++ + I+ + DE Sbjct: 196 VLRRLCKFIELDFNSIESKKTYDE 219 >UniRef50_C5WGX9 RecT protein n=7 Tax=Streptococcus RepID=C5WGX9_STRDG Length = 308 Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 105/191 (54%), Gaps = 18/191 (9%) Query: 68 ALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDL 127 +L + S +A ++ + L L +LG AYL+P+ K Q +GY+G+I+L Sbjct: 47 SLKSASNESIYAAAMKAAVLNLPIEPSLGRAYLVPY--------KGQAQFQLGYKGLIEL 98 Query: 128 ARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFE 187 A+RSGQ +++A +V + S+ L E+L+ + +D V + +A +L +G FE Sbjct: 99 AQRSGQYKNINAGIVYKSQLISYN-PLFEELLLDFSKPQDEIVGY-FAAFKLLNG---FE 153 Query: 188 VMTRKQIELV----RSLSKAGNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMD 242 ++ +E V + SK+ +GPW T ++ MA+KT ++ + KY P+S+E+Q+A+ D Sbjct: 154 KVSFWTVEKVTAHGKKFSKSFASGPWKTDFDAMAQKTILKDILSKYGPLSVEMQKAIEED 213 Query: 243 EKEPLTIDPAD 253 ++ P D Sbjct: 214 NQDSTISTPKD 224 >UniRef50_C3Q0Z8 RecT family protein n=2 Tax=Bacteroides RepID=C3Q0Z8_9BACE Length = 302 Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 92/203 (45%), Gaps = 19/203 (9%) Query: 37 SMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTM---SFVSAIVQCSQLGLEPGS 93 S K+ AA R + A + P L +C V AI S GL Sbjct: 61 SPKKAFIAAGGTEQQFAREVNFAMQAMLNNPYLIDCARQYPDHLVEAIKNVSLTGLTLNP 120 Query: 94 ALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFG 153 L YL+P+ K V+ Y G +D+ R+G + + + +V DEFS G Sbjct: 121 ELRLGYLVPYKGK--------VKFQASYMGKVDILIRTGVVKDIYSDLVYANDEFSMTKG 172 Query: 154 LDEKLIHRP---GENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKA---GNNG 207 +IH+P GE D + +AV L G +F+ M + +IE ++S S+A G Sbjct: 173 TGGTIIHKPNVFGERGDLLGGYYFAV--LTSGVVKFDAMPKARIEEIKSRSEAVKKGKQS 230 Query: 208 PWVTHWEEMAKKTAIRRLFKYLP 230 PW T +EEMA+KT + FK+LP Sbjct: 231 PWDTDFEEMARKTIVNWAFKFLP 253 >UniRef50_A9DEN8 DNA recomination protein n=1 Tax=Yersinia phage PY100 RepID=A9DEN8_9CAUD Length = 332 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 89/189 (47%), Gaps = 13/189 (6%) Query: 76 SFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIA 135 S +AI + +G+ A HAYL+P ++G NV L I Y G+I++A SG I Sbjct: 77 SLKNAITNVAAIGVSLNPAKKHAYLVP------RNG--NVCLDISYLGLINIAVESGSIK 128 Query: 136 SLSARVVREGDEFSFEFGLDEKLIHRPGE-NEDAPVTHVYAVARLKDGGTQFEVMTRKQI 194 A++V D + G+D IH+ + Y + +D M+ +I Sbjct: 129 WAQAKIVYSNDTYE-NTGVDTAPIHKYNAFGNRGEIIGAYVTVKTRDDSYLTTEMSIDEI 187 Query: 195 ELVRSLS---KAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDP 251 +R S K GN+ PW T +EEM KKT I+R +K PVS + A+ M ++ ID Sbjct: 188 HRIRQRSESFKKGNSSPWKTDYEEMVKKTVIKRAYKLWPVSDRLANAIEMLNEQGEGIDF 247 Query: 252 ADSSVLTGE 260 +GE Sbjct: 248 NSERKASGE 256 >UniRef50_B2GBH1 Hypothetical phage protein n=1 Tax=Lactobacillus fermentum IFO 3956 RepID=B2GBH1_LACF3 Length = 342 Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 24/197 (12%) Query: 45 ALPRHMTAERMIRIATTEIRKV------PALGNCDTMSFVSAIVQCSQLGLEPGSALGHA 98 ALP H A+ ++ A ++ V PAL C S +A++ + GL P A Sbjct: 38 ALPAHYNAQNALKAAYLRLQTVKDRQGRPALTVCTEPSIANALLDMAIQGLSP--AKNQC 95 Query: 99 YLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEK- 157 Y + +GN+ +Q+ Y G I +R I + A+V+ +GDEF E G DE Sbjct: 96 YFIVYGNE--------LQMQRSYFGTIAALKRLDSIEDIDAQVIHQGDEF--EIGADETG 145 Query: 158 ----LIHRPG-ENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTH 212 +P N D P+ +A +L +G T + VMT+ QI++ S S+ N Sbjct: 146 HIIVTKFKPSFANLDKPIKGAFAFIKLTNGRTAYTVMTKAQIDVSWSQSRNRQNKVQDKF 205 Query: 213 WEEMAKKTAIRRLFKYL 229 +EMAK+T I R K Sbjct: 206 SDEMAKRTVINRAAKIF 222 >UniRef50_C8PFI2 Phage recombination protein Bet n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PFI2_9PROT Length = 328 Score = 79.7 bits (195), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 25/191 (13%) Query: 67 PALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMID 126 PAL C S + A ++ +LGL P G AY++PF NK QL IGY+G + Sbjct: 47 PALSICSVQSVIGAGLEIVRLGLNPNKTFGQAYVVPFKNK--------AQLQIGYKGWLS 98 Query: 127 LARRSGQIASLSARVVREGDEFSFEF-GLDEKLIHRPGENEDAPVTHVY-------AVAR 178 LA R+G I A + DEF F G+ + + P +E ++ + Sbjct: 99 LAYRNGWI--FRALAAYKCDEFEINFAGIKDDIEFSPNYDERDETNSLWVFNNLRGVIVY 156 Query: 179 LKD-GGTQF-EVMTRKQIELVRSLSKAGNNGPWVTH-W----EEMAKKTAIRRLFKYLPV 231 +KD GG +F E + K++E +R S+ + +T+ W EEM K AI+ + LP+ Sbjct: 157 VKDAGGNEFSEFVPFKKLEQLRLKSQNQKDKEALTNIWGEWAEEMYKAKAIKYVATRLPI 216 Query: 232 SIEIQRAVSMD 242 + +IQ A++ + Sbjct: 217 TEQIQEAINAE 227 >UniRef50_C0CR08 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CR08_9FIRM Length = 342 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%) Query: 29 VISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLG 88 + +++ +KEQ+ + A R I + ++ L C S SA + L Sbjct: 20 ITGYLSNEKVKEQIVNVVGEK-NATRFISSVVSAVQTNANLQKCTNASIFSAALLGESLQ 78 Query: 89 LEPGSALGHAYLLPFGNK----NEKSGKKN------VQLIIGYRGMIDLARRSGQIASLS 138 L P LG Y++P+ N + K+G++ Q IGY+G I LA RSGQ + Sbjct: 79 LTPSPQLGQFYMVPYENNKMVTDPKTGRETKVKVNEAQFQIGYKGYIQLAIRSGQYRKIV 138 Query: 139 ARVVREGDEFSF-----EFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQ 193 V++G+ F EFG++ L + ++ PV Y + L +G + ++Q Sbjct: 139 VSDVKDGEVGFFNPITEEFGMNPVLDME--KRQELPVVGYYGMFELTNGFRKELYWPKEQ 196 Query: 194 IE---------LVRSLSKAGNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMD 242 +E L K + W +++ MAKKT IR+L K+ +SIE+QRA D Sbjct: 197 MEKHAKTYSKGYASDLRKNTSYTFWTKNFDAMAKKTLIRQLISKWGIMSIEMQRAYEAD 255 >UniRef50_B1KTX5 RecT family protein n=2 Tax=Clostridium botulinum RepID=B1KTX5_CLOBM Length = 306 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 18/213 (8%) Query: 38 MKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGH 97 + E L P +++ MI ++ + P L C+ M+ +S+ V + L L +G Sbjct: 26 LNEILGKKTPGFVSS--MINVSNS-----PTLKECEPMTVISSAVVAATLDLPIDPNIGF 78 Query: 98 AYLLPFGNKNEKSGK--KNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLD 155 AY++P+ K++K+GK K Q +GYRG + LA R+ Q +++ V G S+ L Sbjct: 79 AYVVPYNCKDKKTGKWIKKAQFQLGYRGYVQLALRTSQYKNINVVEVYRGQLASWN-PLT 137 Query: 156 EKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELV----RSLSKAGNNGPWVT 211 E+L E V +L +G FE + + E V + SK ++GPW Sbjct: 138 EELQFDFDNKESDEVIGYAGFFKLTNG---FEKVVYWKKEDVLNHAKKYSKTFSSGPWKD 194 Query: 212 HWEEMAKKTAIRRLFKYLPV-SIEIQRAVSMDE 243 ++ MAKKT ++ + K + SIE+Q + D+ Sbjct: 195 DFDSMAKKTVLKDMIKKWGILSIEMQTGIKADQ 227 >UniRef50_Q3C0K4 RecT protein n=2 Tax=root RepID=Q3C0K4_SODGL Length = 557 Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 11/163 (6%) Query: 80 AIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMID----LARRSGQIA 135 A+ +C+ GL P A L+ KN +G+ +++ Y M+D AR+SGQ+A Sbjct: 2 ALKKCATDGLMPDGR--EAALVIRQTKNSSTGQYEDRVV--YMPMVDGVLKRARQSGQVA 57 Query: 136 SLSARVVREGDEFSFEFG-LDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQI 194 ++ ++ V D+F + DE L HRP + + VYA A+L G EVM R ++ Sbjct: 58 NIVSKAVYTADQFDYWVDERDEHLKHRPAFEDRGELRLVYAFAKLTSGELVVEVMGRAEV 117 Query: 195 ELVR-SLSKAGNNG-PWVTHWEEMAKKTAIRRLFKYLPVSIEI 235 + VR +++ AG +G PW ++ MA KT + RL + LP + E+ Sbjct: 118 DKVRATVTSAGKSGSPWAKWYDRMALKTVLHRLARRLPCASEM 160 >UniRef50_B3H0V7 Possible phage recombinase n=6 Tax=Proteobacteria RepID=B3H0V7_ACTP7 Length = 318 Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 104/218 (47%), Gaps = 35/218 (16%) Query: 69 LGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLA 128 L N D MS +A + L L + LG AY++P+ NK E+ K Q +GY+G+I LA Sbjct: 58 LRNADPMSVFNAACMAATLNLPLQNGLGFAYIVPYQNKKER--KTEAQFQLGYKGLIQLA 115 Query: 129 RRSGQIASLSA------RVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDG 182 +RSGQ L A +++ E +EF +K P NE PV + YA +L + Sbjct: 116 QRSGQFKRLVAVPVYEKQLINEDPINGYEFDWKQK----PEANE-KPVGY-YAYFQLVNT 169 Query: 183 GTQFEVMTRKQI--------ELVRSLSKAGNNGPWVT-----HWEEMAKKTAIRRLF-KY 228 T MT ++ + R+ G W T ++E MA KT ++ L K Sbjct: 170 FTAELYMTAFEVDQHAQRYSQTYRTYLDKKAKGQWATSVWADNFEAMALKTVMKLLLSKQ 229 Query: 229 LPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDN 266 P+S+E+Q+AV D+ + D+S E+S DN Sbjct: 230 APLSVEMQQAVLADQA---VVKDVDNS----EFSYPDN 260 >UniRef50_Q4QKZ2 Predicted recombinational DNA repair protein, RecE pathway n=12 Tax=Pasteurellaceae RepID=Q4QKZ2_HAEI8 Length = 306 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 75/263 (28%), Positives = 120/263 (45%), Gaps = 30/263 (11%) Query: 16 QGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMT--AERMIRIATTEIRKVPALGNCD 73 Q N+ P A+K +F +++ ++ + ++ A +++IA + L D Sbjct: 8 QQNKQPPALK-----TFFESANVQNKIKELVGKNAATFATSVMQIANSN----AMLKTAD 58 Query: 74 TMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQ 133 MS +A + L L + LG AY++PF N EK K Q IGY+G I LA+RSGQ Sbjct: 59 PMSIFNAACMAATLNLPLQNGLGFAYIVPFRNNKEK--KTEAQFQIGYKGFIQLAQRSGQ 116 Query: 134 IASLSARVVREGDEFSFEF--GLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTR 191 L A V + +F G + P +NE+ P+ + YA +L + + M+ Sbjct: 117 FKRLVALPVYKKQLIKKDFINGFEFDWEQEPEQNEN-PIGY-YAYFKLVNDFSAELYMSH 174 Query: 192 ----KQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDEKEP 246 K + K G G W ++E MA KT + L K P+S+E+Q+AV D+ Sbjct: 175 DDIVKHAQRYSQTFKKG-YGVWHDNFEAMALKTVTKLLLSKQAPLSVEMQQAVLADQ--- 230 Query: 247 LTIDPADSSVLTGEYSVIDNSEE 269 V E++ DN +E Sbjct: 231 ----AVVKDVENQEFNYTDNIQE 249 >UniRef50_C8U7M5 Predicted DNA recombination protein Bet n=14 Tax=Enterobacteriaceae RepID=C8U7M5_ECO10 Length = 316 Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 19/159 (11%) Query: 79 SAIVQCSQLG--LEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIAS 136 +AI+ + +G L P S L AYL+P KK V L I Y G++ LA+ +G I Sbjct: 56 NAIINVAAIGITLNPASKL--AYLVP--------RKKAVCLDISYMGLLHLAQVTGAIQW 105 Query: 137 LSARVVREGDEFSFEFGLDEKLIHR--PGENEDAPVTHVYAVARLKDGGTQFEVMTRKQI 194 ++V E D + G+D H+ P + A + Y V + +G E M+ ++I Sbjct: 106 GQCKLVYEKDIYESN-GIDCAPTHKYNPFVDRGARIGG-YCVVKTSEGDYLTEEMSNREI 163 Query: 195 ELVRSLSKAGNNG---PWVTHWEEMAKKTAIRRLFKYLP 230 E++R+ SKAGNNG PW + +EMA+K ++R KY P Sbjct: 164 EVIRACSKAGNNGGSSPWDSFPDEMARKAIVKRASKYWP 202 >UniRef50_A1U8M4 RecT protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U8M4_MARAV Length = 319 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 7/157 (4%) Query: 80 AIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSA 139 A+ + +GL G AYL+P + + K V L I YRG+I + +G I A Sbjct: 62 AMYNVAAVGLTLNPNQGLAYLVPRRLRRNEDAK--VMLDISYRGLIAIGVETGAIRWAKA 119 Query: 140 RVVREGDEFSFEFGLDEKLIHR--PGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELV 197 +V E DEF+++ G +K H+ P + + Y +A L GG E M++ ++ + Sbjct: 120 ELVYENDEFTYK-GPADKPDHKCDPFSTDRGAIRGGYCLAELPSGGVLVEAMSKADMDKI 178 Query: 198 RSLSKAGNN--GPWVTHWEEMAKKTAIRRLFKYLPVS 232 R +S+A GPWV E+M K+ ++R K+ P+S Sbjct: 179 RDVSEAFKKGFGPWVDWAEQMMLKSIVKRASKWWPMS 215 >UniRef50_B1QU69 RecT family protein n=2 Tax=Clostridium butyricum RepID=B1QU69_CLOBU Length = 295 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 80/180 (44%), Gaps = 17/180 (9%) Query: 55 MIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKN 114 +I T + K P L +C S ++ ++ + GL P A Y + FG K Sbjct: 47 LILSETVDRDKKPVLQSCSQTSIINTLLDMTIQGLSP--AKKQCYFIAFGGK-------- 96 Query: 115 VQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENED------A 168 +QL+ Y G I +R + ++ A V+ E DEFS+E L+ L N+D Sbjct: 97 LQLMKSYLGNIAATKRLKGVKNVFANVIYEKDEFSYELDLETGLKKITKHNQDFENIDIN 156 Query: 169 PVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKA-GNNGPWVTHWEEMAKKTAIRRLFK 227 + YAV ++DG EVM QI S A G +G +EMAKKT I R K Sbjct: 157 KIKGAYAVIVMEDGLNYVEVMNINQIRNSWSQGAAKGQSGAHKNFTDEMAKKTVINRACK 216 >UniRef50_P45908 Uncharacterized protein yqaK n=15 Tax=root RepID=YQAK_BACSU Length = 284 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 71/268 (26%), Positives = 127/268 (47%), Gaps = 22/268 (8%) Query: 9 KADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMT--AERMIRIATTEIRKV 66 K ++QK Q N P + + + ++ PS+ ++ L + T ++ + +E Sbjct: 8 KNNIQKKQKN-VPVQQQGATMKGLLSSPSVIKRFEEVLGKRATQFTASILSLYNSE---- 62 Query: 67 PALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMID 126 L D MS +S+ + + L L LG+A+++P+G K Q +GY+G I Sbjct: 63 QMLQKTDPMSVISSAMVAATLDLPIDKNLGYAWIVPYGGK--------AQFQLGYKGYIQ 114 Query: 127 LARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQF 186 LA R+GQ S++ + EG+ + +E I DA + + A L +G + Sbjct: 115 LALRTGQYKSINCIPIHEGELQKWNPLTEEIEIDFEKRESDAVIGYA-AYFELINGFRKT 173 Query: 187 EVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRR-LFKYLPVSIEIQRAVSMDEKE 245 T+ Q+E + + G W W+ MA KT ++ L K+ +S+E+Q+AV +++ Sbjct: 174 VYWTKAQVEKHKKKFSKSDFG-WKNDWDAMALKTVLKAVLSKWGILSVEMQKAVIEEDET 232 Query: 246 PLTID---PADSS-VLTGEYSVIDNSEE 269 ID ADSS ++ E S D +E+ Sbjct: 233 RERIDITNEADSSEIIDSEPSNKDETEK 260 >UniRef50_C3X3A2 RecT family protein n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X3A2_OXAFO Length = 290 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 33/201 (16%) Query: 67 PALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMID 126 P L C + VSA +Q + L L P LGH Y++P+ +K Q +GY+G I Sbjct: 50 PNLSVCSRGTIVSAALQGAALDLSPSPVLGHFYIVPYKDK--------AQFQLGYKGYIQ 101 Query: 127 LARRSGQIASLSARVVREGDEFS---FEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGG 183 LA RSGQ ++ +REG+ F + ++I + E PV YA+ L +G Sbjct: 102 LAIRSGQYRRINVLEIREGELLGWNPFAEKISVEIIEDDEKREKLPVVGYYAMFELVNGF 161 Query: 184 TQFEVMTRKQIEL----------VRSLSKAGN-----------NGPWVTHWEEMAKKTAI 222 + ++K++E + S K + W +++MA KT + Sbjct: 162 EKSVYWSKKKMEQHADRYSPAFSLESFKKIQEGKIPKSEMWKYSSFWYADFDQMAFKTLL 221 Query: 223 RRLF-KYLPVSIEIQRAVSMD 242 R L K+ +SI++Q A+ D Sbjct: 222 RHLISKWGVMSIDMQSAIEKD 242 >UniRef50_A8RCV0 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=A8RCV0_9FIRM Length = 304 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 30/236 (12%) Query: 33 INQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPG 92 I S+++ + L +++ + ++ + P L CD S V+A + L L P Sbjct: 21 IQSESIQKLINNTLGDTKKSQKFVTAISSAVAVNPQLQECDGFSIVNAALLGETLQLSPS 80 Query: 93 SALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEF 152 LGH Y++PF +KN+ K +GY+G + LA RSGQ ++ +++G+ +F+ Sbjct: 81 PQLGHYYMVPFNDKNK---GKVATFELGYKGYLQLAIRSGQYKKINVLEIKKGELINFD- 136 Query: 153 GLDEK----LIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTR-KQIELVRSLSKAGN-- 205 L+E+ LI E E A YA+ L +G + ++ K + S A N Sbjct: 137 PLNEELEINLIQDELEREKAETIGYYAMFELVNGFKKALYWSKEKMLSHADKYSAAFNAK 196 Query: 206 ------------------NGPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMD 242 + W ++ MA KT +R+L K+ +SIE+Q A D Sbjct: 197 SYNDLMTGKILDKDKWKYSSFWYKDFDGMAFKTMLRQLISKWGIMSIELQAAFEGD 252 >UniRef50_Q03VK6 Recombinational DNA repair protein (RecE pathway) n=1 Tax=Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 RepID=Q03VK6_LEUMM Length = 310 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 25/201 (12%) Query: 67 PALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGK---KNV--QLIIGY 121 P L + +A ++ + L L LG AY++P+G + + GK K+V Q +GY Sbjct: 44 PDLAKTNMNDLTNAAMRAAILDLSVLPDLGEAYVIPYGKRAKVDGKWVTKDVKAQFQLGY 103 Query: 122 RGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLI----HRPGENEDAPV------- 170 RG+I L + +G++ L VV E ++ + + DE + + P + ++PV Sbjct: 104 RGIIKLVQNTGRVGRLGGSVVYEANKPHYNYVFDEFTMENENYDPYVDGESPVAGYLAFY 163 Query: 171 -------THVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIR 223 + + R+ + T+F T K + K PW T ++ MA KT ++ Sbjct: 164 YLDGERIVKYWPIQRVINHATKFS-QTYKGPDHKDRYGKTPQT-PWYTDFDAMAIKTVMK 221 Query: 224 RLFKYLPVSIEIQRAVSMDEK 244 L K+ P + ++ +A++ D+K Sbjct: 222 DLLKFAPKTTKVAQAIAEDDK 242 >UniRef50_Q6AC64 Phage recombination protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AC64_LEIXX Length = 261 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 89/206 (43%), Gaps = 13/206 (6%) Query: 45 ALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFG 104 AL M A + + A T I++ P +G+ D S A+ +QL L G L +L Sbjct: 23 ALGASMDAAKFAQDALTAIKQNPKIGHSDPRSLFGALFLAAQLKLPVGGPLAQFHL---- 78 Query: 105 NKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEF----SFEFGLDEKLIH 160 G V I+GY G + L +G + +SA ++ GD F + E G E Sbjct: 79 TTRTVKGNLTVVPIVGYGGYVQLIMNTGLYSRVSAFLIHAGDYFVTGANSERG--EFYDF 136 Query: 161 RPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKT 220 R +++ V V A A++K V + + K + PW EM KKT Sbjct: 137 RRADSDRGEVKGVIAYAKVKGHNESSWVYIDAETMRAKHRPKYWESTPWADDAGEMFKKT 196 Query: 221 AIRRLFKYLPVSIE---IQRAVSMDE 243 IR L KYLP S+E + A S D+ Sbjct: 197 GIRVLQKYLPKSVESLNVALAASADQ 222 >UniRef50_A5MYQ8 Phage-related rekombinase protein n=2 Tax=Clostridium kluyveri RepID=A5MYQ8_CLOK5 Length = 297 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/229 (26%), Positives = 112/229 (48%), Gaps = 22/229 (9%) Query: 18 NRAPAAVKNSDVISFIN-QPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMS 76 N P VKN +++ +N Q +E L M + +I ++ +++ + + S Sbjct: 6 NGKPVEVKN--ILANVNVQKRFQEILGKKAAGFMAS--LINVSNGKLKGI------EPYS 55 Query: 77 FVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIAS 136 VS+ + + L L LG A+++P+ KK Q +GY+G + L R+GQ + Sbjct: 56 VVSSAMIAATLDLPIDPNLGFAWIVPY--------KKKAQFQMGYKGFVQLGLRTGQYKN 107 Query: 137 LSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQ-IE 195 ++A + +G S+ L EK+ E V A L G ++ ++++ I Sbjct: 108 INAISIYKGQLKSWN-PLTEKIELNFENKESNEVIGYAAYFSLVSGFEKYVYWSKEEVIT 166 Query: 196 LVRSLSKAGNNGPWVTHWEEMAKKTAIRR-LFKYLPVSIEIQRAVSMDE 243 + SKA N+GPW T++ MA+KT ++ L K+ +SI++Q A+ D+ Sbjct: 167 HAKRFSKAFNDGPWQTNFNRMAEKTVLKNTLSKWGILSIDMQLALQADQ 215 >UniRef50_C9PZW7 RecT family protein n=3 Tax=Bacteroidales RepID=C9PZW7_9BACT Length = 307 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 67/247 (27%), Positives = 106/247 (42%), Gaps = 46/247 (18%) Query: 31 SFINQPSMKEQLAAALPRHMTA--ERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLG 88 S ++ PS+++Q AL H A +I + T + + L CD + V ++ + L Sbjct: 17 SIVSAPSVQDQFKNALGEHKDAFVASLIDLYTGDKQ----LQTCDAKAIVMEALRAATLR 72 Query: 89 LEPGSALGHAYLLPFGN--KNEKSGKKNV---QLIIGYRGMIDLARRSGQIASLSARVVR 143 L ALG AY++ F N KN V + GY+G I LA R+GQ +++A V Sbjct: 73 LPLNRALGFAYIIVFNNNVKNPDGSWSKVPTPTFVPGYKGYIQLAMRTGQYKTINADFVY 132 Query: 144 EG-----DEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQI---E 195 EG D+ E D GE + + + L +G ++ + +++ Sbjct: 133 EGELRKVDKLKGEVAFD-------GEKKSDKIVGYFCYFELLNGFSKTLYVPIEEMAAYA 185 Query: 196 LVRSLSKAGNNGP-------------------WVTHWEEMAKKTAIRRLF-KYLPVSIEI 235 L S S G N P W ++ +M KT IRRL KY +S+E+ Sbjct: 186 LRYSPSFKGKNKPTVEALIAAAQSGAVSSQVGWSGNFNDMGLKTVIRRLLSKYGYLSVEM 245 Query: 236 QRAVSMD 242 Q A+ D Sbjct: 246 QTAMDKD 252 >UniRef50_D0AR03 RecT protein n=2 Tax=Enterococcus faecium RepID=D0AR03_ENTFC Length = 340 Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 73/157 (46%), Gaps = 13/157 (8%) Query: 76 SFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIA 135 S +A++ GL P A Y + +GNK VQL+ Y G + + R A Sbjct: 69 SISNALLDMVIQGLSP--AKKQCYFIKYGNK--------VQLMRSYFGTMAVLDRVTGGA 118 Query: 136 SLSARVVREGDEFSFEFGLDEKLIHR---PGENEDAPVTHVYAVARLKDGGTQFEVMTRK 192 ++ VVR+GDEF ++ + EN D + Y V +L +G VMT+K Sbjct: 119 DITPVVVRQGDEFEVAMDGPNMVVKKHETKFENLDNEIIAAYVVIKLTNGKETTTVMTKK 178 Query: 193 QIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYL 229 QI+ + SK +GP EEMAK+T I R K L Sbjct: 179 QIDQSWAKSKMKGSGPQKEFPEEMAKRTVINRAAKAL 215 >UniRef50_C3WER4 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C3WER4_FUSMR Length = 333 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 28/246 (11%) Query: 22 AAVKNS-----DVISFINQPSMKEQLAA-ALPRHMTA---ERMIRIATTEIRKV---PAL 69 A VKN D+ S + P++K LA A+ + + + ER I+ V P L Sbjct: 2 AKVKNDLVPKDDIQSNVGVPALKSMLATQAIKKQLKSLLGERAGHFMMAIIQVVEGTPQL 61 Query: 70 GNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLAR 129 D S ++A + + L L LG AY++P+ +KN+ + Q +GY+G I LA Sbjct: 62 QQADPQSIINAAIASAVLNLPIEKNLGFAYIVPYNDKNKGTL---AQFQMGYKGYIQLAL 118 Query: 130 RSGQIASLSARVVREGDEFSFEF---GLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQF 186 RSG+ ++A ++EG+ + L+ K I + +A + +G Sbjct: 119 RSGEYKYINAIEIKEGEIQGYNILTGELNLKFIEDLDKRLEAKTVGYASYIEFNNGFRNT 178 Query: 187 EVMTRKQIE---------LVRSLSKAGNNGPWVTHWEEMAKKTAIR-RLFKYLPVSIEIQ 236 MT Q++ L K W +++ MA KT ++ L K+ +S+E+Q Sbjct: 179 LFMTVGQVKNHAEKYSQSYQYDLRKGYTMSNWSKNFDAMALKTVLKLNLSKFGALSVEVQ 238 Query: 237 RAVSMD 242 +A+ D Sbjct: 239 KALQTD 244 >UniRef50_C2FKJ7 Recombination protein RecT n=2 Tax=Lactobacillus plantarum RepID=C2FKJ7_LACPL Length = 299 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 76/170 (44%), Gaps = 25/170 (14%) Query: 67 PALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLII--GYRGM 124 P L CD S + A++ + GL P A Y +P+GN QL++ Y G Sbjct: 49 PLLDKCDQGSVIKALMNMAIQGLSP--AKNQCYFIPYGN----------QLVMQRSYFGS 96 Query: 125 IDLARRSGQIASLSARVVREGDEFSF--EFG-LDEKLIHRPGENEDAPVTHVYAVARLKD 181 I + +R + + A+VV + D F E G L K EN D P+ +A + Sbjct: 97 ISVVKRLSNVKDIQAQVVHKDDTFKIGGENGVLVVKEFEPSFENLDKPIIGAFAWVEDLN 156 Query: 182 GGTQFEVMTRKQIELVRSLSKAG---NNGPWVTHWEEMAKKTAIRRLFKY 228 G + VMT+K I+ S +K N P EEMAK+T I R K+ Sbjct: 157 GNRTYTVMTKKDIDTSWSHAKTKKVQNEFP-----EEMAKRTVINRAAKF 201 >UniRef50_C7WI33 Prophage Lp1 protein 18 n=11 Tax=Enterococcus RepID=C7WI33_ENTFA Length = 338 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 59/168 (35%), Positives = 80/168 (47%), Gaps = 20/168 (11%) Query: 68 ALGNCDTMSFVS-AIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMID 126 A N +T + +S A++ GL P A Y + +GNK VQL+ Y G + Sbjct: 60 AANNPETKTSISNALLDMVIQGLSP--AKKQCYFIKYGNK--------VQLMRSYFGTMA 109 Query: 127 LARRSGQIASLSARVVREGDEFSFEFGLD-EKLI---HRPG-ENEDAPVTHVYAVARLKD 181 + R A ++ VVREGD FE +D L+ H EN D + Y V +L + Sbjct: 110 VLDRVTGGAEITPVVVREGD--VFEIAMDGPDLVVAKHETSFENLDNDIKAAYVVIKLAN 167 Query: 182 GGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYL 229 G VMT+KQI+ +S SKA EEMAK+T I R KYL Sbjct: 168 GKEVTTVMTKKQID--KSWSKAKTKNVQNDFPEEMAKRTVINRAAKYL 213 >UniRef50_Q14MJ4 Putative rect protein n=1 Tax=Spiroplasma citri RepID=Q14MJ4_SPICI Length = 304 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 14/189 (7%) Query: 76 SFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEK--SGKK------NVQLIIGYRGMIDL 127 + ++A Q L L G+AY++P+ K + +G++ Q +GY+G I L Sbjct: 51 TIMTACYQGVLLNLPMEKQFGYAYVVPYNTKITRIINGREIQEWVNQAQFQMGYKGYIQL 110 Query: 128 ARRSGQIASLSARVVREGDEFSFEF--GLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQ 185 A+RSGQ +S VR G+ +++ G + E E + A ++ +G + Sbjct: 111 AQRSGQYLDMSVSDVRVGELVNYDRLKGTSFNWVQNEDEREKLQIIGYVAYFKMVNGFEK 170 Query: 186 FEVMTRKQIE---LVRSLSKAGNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSM 241 MT++Q+E + S + A N ++ ++EMA KT + L K+ +S+E+Q+A Sbjct: 171 TLYMTKEQMENHFMKYSKTYAKNKSFYIATFDEMALKTVLTSLLRKWGIMSVELQQAYKS 230 Query: 242 DEKEPLTID 250 D+ T D Sbjct: 231 DQSVITTND 239 >UniRef50_C4ZCC7 RecT family protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZCC7_EUBR3 Length = 302 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 40/258 (15%) Query: 16 QGNRAPAAVKNSDVISFINQPSMKEQLAAAL----PRHMTAERMIRIATTEIRKVPALGN 71 QG + A + V S I+Q ++K++ L P+ + + + + +++K PA Sbjct: 11 QGTQLSVAAQ---VKSMISQDAVKKKFTEVLGQKAPQFLASITNVVAGSAQLKKCPA--- 64 Query: 72 CDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKN--------EKSGKKNVQLIIGYRG 123 + +SA + L S LG A ++P+ N EK + Q++ Y+G Sbjct: 65 ---TTIMSAAFVAATYDLPIDSNLGFAAIVPYNNNKYNPQTRQWEKHPEAQFQMM--YKG 119 Query: 124 MIDLARRSGQIASLSARVVREGDEFSF-------EFGLDEKLIHRPGENEDAPVTHVYAV 176 I LA RSG ++ VV + + S+ EF D + E + + YA Sbjct: 120 FIQLAIRSGYYEKMNCSVVYKDELVSYNPITGEVEFVTDFSKCTQRAEGKSENIAGYYAW 179 Query: 177 ARLKDGGTQFEVMTRKQIE-LVRSLSKA-----GNN---GPWVTHWEEMAKKTAIRRLF- 226 +L G + MT ++E R S A NN W T +E MA KT I+ L Sbjct: 180 FKLLTGFRKELFMTTAEVENHARKYSTAYRYDLENNKKGSKWTTDFEAMALKTVIKMLLS 239 Query: 227 KYLPVSIEIQRAVSMDEK 244 K+ +S+++QRA+ D+K Sbjct: 240 KWGILSVDMQRAIQDDQK 257 >UniRef50_B4AH83 RecT protein n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AH83_BACPU Length = 306 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 23/198 (11%) Query: 46 LPRHMTAERMIRIATTEIRKV------PALGNCDTMSFVSAIVQCSQLGLEPGSALGHAY 99 LP + A ++ A ++++V PAL C S ++++ GL P A Y Sbjct: 31 LPSNYNASNALKSAFFKLQEVKDKSGRPALEVCTRESIANSLLDMVVQGLSP--AKTQCY 88 Query: 100 LLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEF-GLDEKL 158 + +GNK +Q+ Y G + +R + + + V+ EGD F +E G EKL Sbjct: 89 FIVYGNK--------LQMNRSYFGTQAVLKRLTNVKDIWSNVIYEGDVFEYEIDGGQEKL 140 Query: 159 IHRPG--ENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHW-EE 215 I EN D + YAV + D MT+K+IE S SK G + +E Sbjct: 141 IKHETKLENRDKDIIGAYAVVKTIDDIELLTPMTKKEIETAWSQSKTS--GAVQKKFPQE 198 Query: 216 MAKKTAIRRLFK-YLPVS 232 MA++T I R K Y+ S Sbjct: 199 MAQRTVINRAAKRYINTS 216 >UniRef50_C0WT85 Putative uncharacterized protein n=1 Tax=Lactobacillus buchneri ATCC 11577 RepID=C0WT85_LACBU Length = 333 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 72/156 (46%), Gaps = 17/156 (10%) Query: 76 SFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIA 135 S +A+V GL P A Y +P+G K V L Y G +R + Sbjct: 63 SIANALVDMVVQGLTP--AKDQVYFIPYG--------KQVTLQRSYFGTQAALKRLNSVQ 112 Query: 136 SLSARVVREGDEFSFEFGLDEKLI---HRPG-ENEDAPVTHVYAVARLKDGGTQFEVMTR 191 + A VV + DEF D +LI +P EN D P+ +AV + DG + VMT+ Sbjct: 113 DIWAEVVHKDDEFEIS-AEDGRLIVSKFKPSFENLDKPIVGTFAVVQKVDGEKIYTVMTK 171 Query: 192 KQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFK 227 KQI+ S S+A N+ EEMAK+T I R K Sbjct: 172 KQIDT--SWSQARNHNVQQKFPEEMAKRTVINRAAK 205 >UniRef50_B1XAU6 RecT protein n=3 Tax=Enterobacteriaceae RepID=B1XAU6_ECODH Length = 305 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 21/164 (12%) Query: 79 SAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLS 138 +AI+ + +G+ A AYL+P K + L I Y G++ +A++SG I Sbjct: 57 NAIINVAAIGISLNPAQKLAYLVP--------RKGAICLDISYMGLMHIAQQSGAIKWCQ 108 Query: 139 ARVVREGDEFSFEFGLDEKLIH----RPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQI 194 + +VR D+F E GLD+ IH E + + Y + DG M I Sbjct: 109 SAIVRRNDQFRRE-GLDKPPIHIYNDFDTEEQRGDIVGAYVTVKTDDGDYLTHTMRIDAI 167 Query: 195 ELVRSLSKA--------GNNGPWVTHWEEMAKKTAIRRLFKYLP 230 +R S+A PWVT E+M KT +++ KY P Sbjct: 168 YSIRDRSEAWKKYKSDNSKKCPWVTDEEQMILKTVVKQAAKYWP 211 >UniRef50_A8Z301 Possible recombination protein RecT n=32 Tax=root RepID=A8Z301_STAAT Length = 306 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 44/227 (19%) Query: 46 LPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGN 105 LP + ++ A +I + L +C+ S +A++ GL P A Y +P+GN Sbjct: 39 LPNDYSPSNAMKQAWLQISQDNKLMSCNDTSKANALLDMVTQGLNP--AKNQCYFIPYGN 96 Query: 106 KNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFG---------LDE 156 K +QL Y G + + +R + A+V+ +GD F E G ++ Sbjct: 97 K--------MQLQRSYHGNVMMLKRDAGAQDVVAQVIYKGDTFKQEMGETGRIKAIKHEQ 148 Query: 157 KLIHRPGENEDAPVTHVYAVARLKDGGTQF-EVMTRKQIE-------LVRSLSKAGNNGP 208 + EN + Y DG + EVMT +QI+ +++ N+ Sbjct: 149 DFFNIDKEN----IIGAYCTIVFNDGRDNYIEVMTIEQIKQAWMQSSMIKDEKALQNSKT 204 Query: 209 WVTHWEEMAKKTAIRR-------------LFKYLPVSIEIQRAVSMD 242 EEMAKKT I R LFKY S + QR +D Sbjct: 205 HNNFKEEMAKKTVINRAAKRYINTSTDSNLFKYAQESEQRQRKEVLD 251 >UniRef50_Q708Q2 Putative uncharacterized protein n=2 Tax=root RepID=Q708Q2_9CAUD Length = 323 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 15/159 (9%) Query: 72 CDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRS 131 C S +A++ GL P A Y +P+GN V+L Y G + + ++ Sbjct: 57 CTQDSIYNALLDMVTQGLSP--AKTQCYFIPYGN--------TVKLTRSYFGTMKVVKQL 106 Query: 132 GQIASLSARVVREGDEFSF--EFGLDEKLIHRPGE-NEDAPVTHVYAVARLKDGGTQFEV 188 ++ + A V+ EGD+F E G + H N D P+ Y + +DG V Sbjct: 107 PEVKDIYAEVIYEGDKFQIKNENGRKVFVSHETDWVNADNPIAGAYCIIEKEDGEKILTV 166 Query: 189 MTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFK 227 MT+K+I+ +S ++A +EMAK+T I R K Sbjct: 167 MTKKEID--KSWAQAKTKNVQNNFPQEMAKRTVINRAAK 203 >UniRef50_A0M496 RecT family protein n=1 Tax=Gramella forsetii KT0803 RepID=A0M496_GRAFK Length = 313 Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 33/197 (16%) Query: 46 LPRHMTAERMIRIA------TTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAY 99 +P++ + E ++ A T + K P L +C S A+++ GL P Y Sbjct: 36 IPKNYSVENSLKSAYLILSETKDKNKKPVLESCSVTSLSEALLKMVVWGLNPMKK--QCY 93 Query: 100 LLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFG------ 153 +P+G K ++ I Y G I +A+R + + A V + D F FE Sbjct: 94 FVPYGGK--------IECIPDYTGKIAMAKRYAGLKDIKAHAVFKDDTFEFEVDPSTGRK 145 Query: 154 ---LDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWV 210 + + G NE YA+ + DG E+M++ QI V + + NG Sbjct: 146 KVTKHTQTLESMGSNE---FKGAYAIMEMNDGTFDVEIMSKPQI--VAAWQQGHANGTSP 200 Query: 211 THW---EEMAKKTAIRR 224 H + MA+K+ I R Sbjct: 201 AHKKFPDRMARKSVINR 217 >UniRef50_C0YSU1 Probable RecT protein n=2 Tax=Flavobacteriaceae RepID=C0YSU1_9FLAO Length = 289 Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 63/247 (25%), Positives = 110/247 (44%), Gaps = 27/247 (10%) Query: 22 AAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAI 81 +A ++ NQ +++E+ L + A+ I + L N D M+ +A Sbjct: 2 SATNQKSALTLFNQTNVQEKFEKLLGKK--AQGFISSVLQIVNGNKLLQNADPMTVYNAA 59 Query: 82 VQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARV 141 + L L LG A+++P+ K + Q +G++G + LA R+ Q +++ Sbjct: 60 ATAAVLDLPINPNLGFAWIVPY--------KGSAQFQMGWKGFVQLALRTNQYQNINTTE 111 Query: 142 VREGDEFSFEFGLDEKL---IHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQ-IELV 197 V E SF L E+L GE E + +LK G ++ ++++ I Sbjct: 112 VYENQFKSFN-RLTEELEADFDVQGEGE---IVGYAGYMKLKSGFSKTTYWSKEEVITHA 167 Query: 198 RSLSKA---GNNGPW--VTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMD---EKEPLT 248 + S+A G+ PW + MAKKT ++ L K+ +S+E+Q A D +KE + Sbjct: 168 KKYSQAYGKGSMSPWNDKEQFHAMAKKTVLKNLISKWGIMSVEMQNAHLADQSVQKEMGS 227 Query: 249 IDPADSS 255 D DSS Sbjct: 228 YDYVDSS 234 >UniRef50_A5VKM2 RecT protein n=8 Tax=Lactobacillus reuteri RepID=A5VKM2_LACRD Length = 329 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 32/198 (16%) Query: 45 ALPRHMTAERMIRIATTEIR-KVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPF 103 ++P +T + ++R+ + + K P L C S + +++ GL P A Y + + Sbjct: 58 SVPNALT-QALLRLQAVKTKGKTPVLQACTPNSIIQSLMDMVVQGLSP--AKDQCYFIAY 114 Query: 104 GNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFG------LDEK 157 GN+ +QL Y G R I + A+ + EGD+ + LD + Sbjct: 115 GNE--------LQLRRSYFGTTAALLRLENITDVDAQAIYEGDQVNTSIDRHGHLVLDTE 166 Query: 158 LIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTH----- 212 H N+D + YA+ DG +MT+KQI++ + SK TH Sbjct: 167 NTHLDWTNQDNELIGAYAIITTADGVDHLTIMTKKQIKVSWNQSK--------THDVQNK 218 Query: 213 -WEEMAKKTAIRRLFKYL 229 EMAK+T + R K Sbjct: 219 FGSEMAKRTVLNRAAKMF 236 >UniRef50_C7THK4 RecT family protein n=4 Tax=Lactobacillales RepID=C7THK4_LACRL Length = 291 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 19/147 (12%) Query: 88 GLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDE 147 GL P A Y +P+G K++ L+ Y G + + +R + + A VVREGD+ Sbjct: 70 GLSP--AKNQVYFIPYG--------KDLTLMRSYFGSLAILKRLDNVQDVWAEVVREGDK 119 Query: 148 FSFEFGLDE-----KLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSK 202 F+ G D K+ EN+D + +AV +G F +MT+KQI+ +S S Sbjct: 120 --FQIGSDRGRTVVKVFEPRIENQDNAIAAAFAVIVDNNGVENFTIMTKKQID--QSWSH 175 Query: 203 AGNNGPWVTHWEEMAKKTAIRRLFKYL 229 A EEMAK+T + R K+ Sbjct: 176 AKTKKVQQEFPEEMAKRTVLNRAAKFF 202 >UniRef50_B7XGP3 DNA recombination protein n=2 Tax=Pseudomonas RepID=B7XGP3_PSEPU Length = 373 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 81/200 (40%), Gaps = 27/200 (13%) Query: 38 MKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGH 97 K +L A M + + + ATT + +S +A Q + GL + Sbjct: 42 FKNELLFASQAMMNNDYLCKCATT-----------NPLSLRNAFSQVAAYGLTLNQSRQL 90 Query: 98 AYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEK 157 AYL+P + G+ V L + +RGM+ +A G I +V D+F + G + Sbjct: 91 AYLVP------RDGQ--VVLDVSWRGMVKVAVNDGAIRDCIVELVYSKDKFEYR-GKRQS 141 Query: 158 LIH--RPGEN--EDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRS---LSKAGNNGPWV 210 H P + + Y A L DG E +T +I R L K GPWV Sbjct: 142 PTHTFNPFDKKADRGEFVGCYVEALLPDGRVHVEAVTADEINAARDASELWKRKKKGPWV 201 Query: 211 THWEEMAKKTAIRRLFKYLP 230 + M KK+AI+ KY P Sbjct: 202 DFEDSMRKKSAIKIARKYWP 221 >UniRef50_Q14KA3 Putative rect protein n=3 Tax=Spiroplasma citri RepID=Q14KA3_SPICI Length = 284 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 27/237 (11%) Query: 17 GNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGN---CD 73 N+ + NS V ++IN E+L ++ + ++ I P L + + Sbjct: 2 NNKIELILNNSKVNNWIN-----EKLTNQKEINLFRKNILTIYNNN----PNLFDKEKIN 52 Query: 74 TMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQ 133 MS +SA V+ L L LG+AY++P+ K QL IGY+G I LA R+G+ Sbjct: 53 LMSVLSACVKAMLLDLPLDPNLGYAYIVPYNGKG--------QLQIGYKGYIQLAIRTGK 104 Query: 134 IASLSARVVREGDEFSF---EFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMT 190 +++A V++G+ +F E + K I E A +L +G + + Sbjct: 105 YLTINAIEVKQGELLNFDELEQEYNFKWITNENERTKKETIGYVAFFKLLNGYKKTLYWS 164 Query: 191 RKQIE-LVRSLSKAGNNGPWVT--HWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDE 243 +++ E ++ SK T +E MA KT + +L K+ +S+E+Q A D+ Sbjct: 165 KEKCENHFKTYSKNYQTYGKFTAGSYEGMALKTVLTQLLRKWGIMSVEMQEAYQHDQ 221 >UniRef50_C6CX43 RecT protein n=2 Tax=Paenibacillus RepID=C6CX43_PAESJ Length = 299 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 84/213 (39%), Gaps = 33/213 (15%) Query: 15 TQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDT 74 T N+A A+ ++ NQ + E L A + + T E+ Sbjct: 2 TNNNKAVQAIDTQALVGNFNQTEL-ETLKATIAKGTTNEQ-------------------- 40 Query: 75 MSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQI 134 F + C++ GL P L Y + + N K G + + I G++ LA+R Q Sbjct: 41 --FALFVQTCARSGLNP--FLNQIYCIVY---NGKDGPV-MSIQIAVEGIVSLAKRHPQY 92 Query: 135 ASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQI 194 A V+E DEF + + +H+ + Y VA D ++T Q+ Sbjct: 93 GGFIASEVKEHDEFEIDV-VSGVPVHKITSLQRGKTIGAYCVAYRTDAPNIAVIITNDQV 151 Query: 195 ELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFK 227 + L K N W ++++M K AI+R FK Sbjct: 152 D---HLLKGRNGQMWKDYFDDMIVKHAIKRAFK 181 >UniRef50_Q8L268 DNA recombination protein n=1 Tax=Proteus vulgaris RepID=Q8L268_PROVU Length = 510 Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 33/180 (18%) Query: 76 SFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIA 135 SF +A +Q + GL AL AYL+P + G+ V L + Y G+ LA G Sbjct: 82 SFGTAFLQLATSGLSLDPALKLAYLVP------RMGR--VFLDVSYIGLSRLATDEGLCQ 133 Query: 136 SLSARVV-----------REGDEFSFE-FGLDEKLIHRP-------GENEDAPVTHVYAV 176 + +V R+ E SF+ F L+ P GE VY Sbjct: 134 DIVVELVFTDDSFKSNGRRQSPEHSFDPFADKGPLLLTPEEEKAYTGERPRGVFRGVYVD 193 Query: 177 ARLKDGGTQFEVMTRKQIELVRSLSKAGN------NGPWVTHWEEMAKKTAIRRLFKYLP 230 ++KDG +TR+++ RS+S + PW T +M +K+AI++ +P Sbjct: 194 YQMKDGRNLVYFLTRQELAAARSVSDSWKKTEKRAQSPWTTFPWQMVRKSAIKQTIHQIP 253 >UniRef50_Q1CP37 RecT protein n=5 Tax=Streptococcus pyogenes RepID=Q1CP37_STRPF Length = 185 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 8/89 (8%) Query: 170 VTHVYAVARLKDGGTQFEVMTRKQIELV----RSLSKAGNNGPWVTHWEEMAKKTAIRRL 225 + +A +L +G FE ++ +E V + SK+ +GPW T ++ MA+KT ++ + Sbjct: 16 IVGYFAAFKLFNG---FEKVSFWTVEKVTAHGKKFSKSFASGPWKTDFDAMAQKTILKDI 72 Query: 226 F-KYLPVSIEIQRAVSMDEKEPLTIDPAD 253 KY P+S+E+Q+A+ D ++ P D Sbjct: 73 LSKYGPLSVEMQKAIEEDNQDSTISTPKD 101 >UniRef50_C3XHV1 Predicted protein n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XHV1_9HELI Length = 147 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 4/135 (2%) Query: 25 KNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQC 84 + ++V+ + ++E+L A + ++ + + I L C S V A + Sbjct: 9 RKNEVMVLLENKEIQERLCALCGNEASKDK-FKASLLNIALDSNLSACSMQSIVKASLDI 67 Query: 85 SQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVRE 144 + L L LG AY++P + ++ IGY+G ++LA+RS S+ A V + Sbjct: 68 AGLKLNLNKNLGKAYIVPRSVRQGNGYVTEARIDIGYKGWLELAKRSK--LSVKAHSVFD 125 Query: 145 GDEFSFE-FGLDEKL 158 DEFS+ G++E + Sbjct: 126 CDEFSYNVMGVNENM 140 >UniRef50_A6LTW5 RecT protein n=2 Tax=Clostridium RepID=A6LTW5_CLOB8 Length = 306 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 25/197 (12%) Query: 46 LPRHMTAERMIRIATTEIRKV------PALGNCDTMSFVSAIVQCSQLGLEPGSALGHAY 99 LP++ +AE I A +++V AL C S V A+ GL P Y Sbjct: 32 LPKNYSAENAINSAWLMLQEVVDKEKKQALEVCTKTSIVEALYNMVLQGLSPSKR--QCY 89 Query: 100 LLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLI 159 + G+K + L+ Y G I +R I + A V+ EGD F F + I Sbjct: 90 FIVHGSK--------LTLMKSYMGSIVATKRLSGIKDVKAFVIYEGDVFETVFNNETYTI 141 Query: 160 ---HRPG-ENEDA-PVTHVYAVARLKDGG-TQFEVMTRKQIELVRSLSKAGNNGPWVTH- 212 ++P EN ++ + +A+ D E+MT QI + A +G TH Sbjct: 142 EFNYQPKFENINSNKIKGAFALIIGDDNKLLHTEIMTIDQIRKSWGMGIAYKSGKSNTHN 201 Query: 213 --WEEMAKKTAIRRLFK 227 EEMAKK+ I R K Sbjct: 202 DFGEEMAKKSVINRACK 218 >UniRef50_Q4EN42 RecT protein, putative n=5 Tax=Listeria monocytogenes RepID=Q4EN42_LISMO Length = 303 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 19/145 (13%) Query: 84 CSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVR 143 C GL P L H Y + +GN+ N+Q I G+ LARRS + ++V Sbjct: 45 CKNSGLNP--FLNHVYFIKYGNQ------MNIQ--ISVEGVEYLARRSEGYRGIDVQLVH 94 Query: 144 EGDEFSFEFGLDEKLIHRPGENE----DAPVTHVYAVARLKDGGTQFEVMTRKQIELVRS 199 E DE FG +E+ + ++E VT YA+AR K+ F V+ + V Sbjct: 95 EKDEIR--FGRNEQGVMTVTKHEFGFPRGKVTGGYAIAR-KENFPDFVVVMDVE--EVEH 149 Query: 200 LSKAGNNGPWVTHWEEMAKKTAIRR 224 + N W ++ +M KK I+R Sbjct: 150 MKNGTNKNMWSKYFNDMFKKHLIKR 174 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P33228 Protein recT n=37 Tax=root RepID=RECT_ECOLI 404 e-111 UniRef50_A6LN18 RecT protein n=2 Tax=Bacteria RepID=A6LN18_THEM4 303 4e-81 UniRef50_C9S1B3 RecT protein n=15 Tax=root RepID=C9S1B3_GEOSY 303 4e-81 UniRef50_Q9AKZ0 Putative uncharacterized protein n=1 Tax=Legione... 289 7e-77 UniRef50_A8RIH0 Putative uncharacterized protein n=1 Tax=Clostri... 284 2e-75 UniRef50_A9I8T0 Phage-related DNA recombination protein n=11 Tax... 281 1e-74 UniRef50_C5EMH8 RecT protein n=3 Tax=Clostridiales RepID=C5EMH8_... 281 2e-74 UniRef50_B9EBP3 Putative uncharacterized protein n=1 Tax=Macroco... 278 1e-73 UniRef50_Q7P5T6 RecT protein n=1 Tax=Fusobacterium nucleatum sub... 278 1e-73 UniRef50_C9LU62 Protein RecT n=2 Tax=Selenomonas RepID=C9LU62_9FIRM 275 1e-72 UniRef50_UPI00016C62AB recombination and repair protein RecT n=1... 269 7e-71 UniRef50_A7VTD0 Putative uncharacterized protein n=1 Tax=Clostri... 268 1e-70 UniRef50_Q38143 35 protein n=1 Tax=Bacillus phage SPP1 RepID=Q38... 266 6e-70 UniRef50_C3WEC1 RecT protein n=1 Tax=Fusobacterium mortiferum AT... 261 2e-68 UniRef50_C0W9K5 Recombination and repair protein recT n=1 Tax=Ac... 257 4e-67 UniRef50_B2JU71 RecT protein n=1 Tax=Burkholderia phymatum STM81... 254 3e-66 UniRef50_C3KZR3 RecT n=1 Tax=Clostridium botulinum Ba4 str. 657 ... 246 5e-64 UniRef50_C2CG07 Recombination and repair protein RecT n=1 Tax=An... 246 8e-64 UniRef50_C4VG97 RecT family protein n=19 Tax=root RepID=C4VG97_E... 238 2e-61 UniRef50_C5V0B4 RecT protein n=1 Tax=Gallionella ferruginea ES-2... 236 8e-61 UniRef50_C0ZFI5 Putative uncharacterized protein n=1 Tax=Breviba... 235 1e-60 UniRef50_P45908 Uncharacterized protein yqaK n=15 Tax=root RepID... 230 4e-59 UniRef50_C9AMX6 Recombinase n=11 Tax=Enterococcus faecium RepID=... 229 6e-59 UniRef50_B3WCF3 RecT protein n=2 Tax=Lactobacillus casei group R... 228 2e-58 UniRef50_A0QB14 YqaK protein n=4 Tax=root RepID=A0QB14_MYCA1 226 6e-58 UniRef50_Q2G4T8 Rect protein n=1 Tax=Novosphingobium aromaticivo... 219 7e-56 UniRef50_Q4QKZ2 Predicted recombinational DNA repair protein, Re... 216 5e-55 UniRef50_B3WDD8 RecT protein n=3 Tax=Lactobacillus casei group R... 216 6e-55 UniRef50_C0A3T3 Recombinational DNA repair protein (RecE pathway... 215 1e-54 UniRef50_B1KTX5 RecT family protein n=2 Tax=Clostridium botulinu... 212 9e-54 UniRef50_C5WGX9 RecT protein n=7 Tax=Streptococcus RepID=C5WGX9_... 209 9e-53 UniRef50_B8IIR3 RecT protein n=3 Tax=Methylobacterium RepID=B8II... 207 2e-52 UniRef50_C0YSU1 Probable RecT protein n=2 Tax=Flavobacteriaceae ... 204 3e-51 UniRef50_C5IHJ8 Gp06 n=2 Tax=unclassified Podoviridae RepID=C5IH... 202 1e-50 UniRef50_B3H0V7 Possible phage recombinase n=6 Tax=Proteobacteri... 201 2e-50 UniRef50_A7A5B7 Putative uncharacterized protein n=1 Tax=Bifidob... 201 3e-50 UniRef50_C0CR08 Putative uncharacterized protein n=1 Tax=Blautia... 201 3e-50 UniRef50_D2L6Y9 RecT protein n=1 Tax=Desulfovibrio sp. FW1012B R... 197 2e-49 UniRef50_Q854T9 Gp61 n=1 Tax=Mycobacterium phage Che9c RepID=Q85... 196 6e-49 UniRef50_A8RCV0 Putative uncharacterized protein n=2 Tax=Firmicu... 196 1e-48 UniRef50_A5MYQ8 Phage-related rekombinase protein n=2 Tax=Clostr... 195 1e-48 UniRef50_Q9AZQ0 RecT n=2 Tax=root RepID=Q9AZQ0_9CAUD 195 2e-48 UniRef50_C4ZCC7 RecT family protein n=1 Tax=Eubacterium rectale ... 193 4e-48 UniRef50_A9BYL3 RecT protein n=3 Tax=Burkholderiales RepID=A9BYL... 191 2e-47 UniRef50_B6JI05 Rect protein n=1 Tax=Oligotropha carboxidovorans... 191 3e-47 UniRef50_C3WER4 Putative uncharacterized protein n=2 Tax=Fusobac... 188 2e-46 UniRef50_C3X3A2 RecT family protein n=1 Tax=Oxalobacter formigen... 186 6e-46 UniRef50_Q14MJ4 Putative rect protein n=1 Tax=Spiroplasma citri ... 185 1e-45 UniRef50_A9DEN8 DNA recomination protein n=1 Tax=Yersinia phage ... 185 1e-45 UniRef50_Q6AC64 Phage recombination protein n=1 Tax=Leifsonia xy... 181 2e-44 UniRef50_A4XBY1 RecT protein n=1 Tax=Salinispora tropica CNB-440... 181 2e-44 UniRef50_C3Q0Z8 RecT family protein n=2 Tax=Bacteroides RepID=C3... 179 1e-43 UniRef50_C7Q4I7 RecT protein n=1 Tax=Catenulispora acidiphila DS... 179 1e-43 UniRef50_Q03VK6 Recombinational DNA repair protein (RecE pathway... 176 7e-43 UniRef50_C9PZW7 RecT family protein n=3 Tax=Bacteroidales RepID=... 176 1e-42 UniRef50_A1U8M4 RecT protein n=1 Tax=Marinobacter aquaeolei VT8 ... 172 8e-42 UniRef50_C0Q2I7 Rac prophage; recombination and repair protein n... 170 3e-41 UniRef50_A5N589 Phage-related protein n=16 Tax=Clostridium RepID... 162 1e-38 UniRef50_B2GBH1 Hypothetical phage protein n=1 Tax=Lactobacillus... 162 2e-38 UniRef50_C8U7M5 Predicted DNA recombination protein Bet n=14 Tax... 160 6e-38 UniRef50_C2FKJ7 Recombination protein RecT n=2 Tax=Lactobacillus... 159 1e-37 UniRef50_Q14KA3 Putative rect protein n=3 Tax=Spiroplasma citri ... 157 3e-37 UniRef50_B1XAU6 RecT protein n=3 Tax=Enterobacteriaceae RepID=B1... 154 2e-36 UniRef50_B4AH83 RecT protein n=1 Tax=Bacillus pumilus ATCC 7061 ... 154 3e-36 UniRef50_Q3C0K4 RecT protein n=2 Tax=root RepID=Q3C0K4_SODGL 151 2e-35 UniRef50_Q708Q2 Putative uncharacterized protein n=2 Tax=root Re... 150 5e-35 UniRef50_C8PFI2 Phage recombination protein Bet n=1 Tax=Campylob... 150 6e-35 UniRef50_D0AR03 RecT protein n=2 Tax=Enterococcus faecium RepID=... 149 1e-34 UniRef50_B1QU69 RecT family protein n=2 Tax=Clostridium butyricu... 148 2e-34 UniRef50_A8Z301 Possible recombination protein RecT n=32 Tax=roo... 147 3e-34 UniRef50_A5VKM2 RecT protein n=8 Tax=Lactobacillus reuteri RepID... 145 2e-33 UniRef50_C7WI33 Prophage Lp1 protein 18 n=11 Tax=Enterococcus Re... 143 5e-33 UniRef50_A0M496 RecT family protein n=1 Tax=Gramella forsetii KT... 143 6e-33 UniRef50_C0WT85 Putative uncharacterized protein n=1 Tax=Lactoba... 143 7e-33 UniRef50_B7XGP3 DNA recombination protein n=2 Tax=Pseudomonas Re... 142 9e-33 UniRef50_C7THK4 RecT family protein n=4 Tax=Lactobacillales RepI... 138 2e-31 UniRef50_C6CX43 RecT protein n=2 Tax=Paenibacillus RepID=C6CX43_... 131 3e-29 UniRef50_Q8L268 DNA recombination protein n=1 Tax=Proteus vulgar... 122 1e-26 UniRef50_C3XHV1 Predicted protein n=1 Tax=Helicobacter bilis ATC... 113 7e-24 UniRef50_Q1CP37 RecT protein n=5 Tax=Streptococcus pyogenes RepI... 107 5e-22 Sequences not found previously or not previously below threshold: UniRef50_A8U879 Putative uncharacterized protein n=1 Tax=Carnoba... 125 1e-27 UniRef50_Q14NF8 Putative rect protein n-terminal truncated n=1 T... 121 2e-26 UniRef50_A6LTW5 RecT protein n=2 Tax=Clostridium RepID=A6LTW5_CLOB8 117 3e-25 UniRef50_C1MEI7 DNA recombination protein n=1 Tax=Citrobacter sp... 112 9e-24 UniRef50_D2BK83 Phage protein n=2 Tax=root RepID=D2BK83_LACLK 84 6e-15 UniRef50_B2KDD4 Putative uncharacterized protein n=1 Tax=Elusimi... 84 6e-15 UniRef50_Q4EN42 RecT protein, putative n=5 Tax=Listeria monocyto... 80 6e-14 UniRef50_A0L2V3 Putative uncharacterized protein n=1 Tax=Shewane... 79 1e-13 UniRef50_B7AAL6 RecT protein n=1 Tax=Thermus aquaticus Y51MC23 R... 68 3e-10 UniRef50_UPI0001BC8619 hypothetical protein BacD2_23915 n=1 Tax=... 65 2e-09 UniRef50_B0N8M1 Putative uncharacterized protein n=1 Tax=Clostri... 64 6e-09 UniRef50_UPI00016930B5 hypothetical protein Plarl_00518 n=2 Tax=... 61 3e-08 UniRef50_A0L2V4 Putative uncharacterized protein n=1 Tax=Shewane... 60 6e-08 UniRef50_Q14KS4 Putative uncharacterized protein n=2 Tax=Spiropl... 60 7e-08 UniRef50_B5D087 Putative uncharacterized protein n=1 Tax=Bactero... 59 2e-07 UniRef50_C5UY99 Phage recombination protein Bet n=1 Tax=Clostrid... 47 7e-04 UniRef50_Q1DAT2 Phage recombination protein Bet n=2 Tax=Cystobac... 46 0.002 UniRef50_A6TRD8 Phage recombination protein Bet n=4 Tax=Clostrid... 43 0.008 UniRef50_A7ILD9 Putative uncharacterized protein n=1 Tax=Xanthob... 43 0.013 UniRef50_B6GAM9 Putative uncharacterized protein n=1 Tax=Collins... 42 0.015 UniRef50_A8ATK8 Gp50 n=3 Tax=root RepID=A8ATK8_9CAUD 42 0.024 UniRef50_Q1CQT2 Phage protein, RecT family n=4 Tax=Streptococcus... 42 0.031 >UniRef50_P33228 Protein recT n=37 Tax=root RepID=RECT_ECOLI Length = 269 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 269/269 (100%), Positives = 269/269 (100%) Query: 1 MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIAT 60 MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIAT Sbjct: 1 MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIAT 60 Query: 61 TEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIG 120 TEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIG Sbjct: 61 TEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIG 120 Query: 121 YRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLK 180 YRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLK Sbjct: 121 YRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLK 180 Query: 181 DGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVS 240 DGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVS Sbjct: 181 DGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVS 240 Query: 241 MDEKEPLTIDPADSSVLTGEYSVIDNSEE 269 MDEKEPLTIDPADSSVLTGEYSVIDNSEE Sbjct: 241 MDEKEPLTIDPADSSVLTGEYSVIDNSEE 269 >UniRef50_A6LN18 RecT protein n=2 Tax=Bacteria RepID=A6LN18_THEM4 Length = 300 Score = 303 bits (776), Expect = 4e-81, Method: Composition-based stats. Identities = 117/258 (45%), Positives = 161/258 (62%), Gaps = 7/258 (2%) Query: 9 KADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPA 68 KA LQK G + PA K + + I + M+ Q+ ALP+H+ ER RI TE+RK P Sbjct: 8 KAQLQKKGGTKPPA--KGNTLADLIKK--MEPQIKRALPKHLNVERFTRIILTEVRKNPK 63 Query: 69 LGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLA 128 L +CD MSF++A++ +QLGLEPGS LG AY++P+ N+ K GK Q +GY+G+IDL Sbjct: 64 LLDCDPMSFMAAMMTAAQLGLEPGSHLGQAYIIPYYNR--KLGKTLAQFQLGYKGIIDLF 121 Query: 129 RRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEV 188 RS Q ++ A V E DEF FE+GL KL H+P N V YAVA LKDGG F V Sbjct: 122 YRSEQALNIDAHEVCENDEFEFEYGLHPKLYHKPSLNGRGKVIAYYAVAHLKDGGYSFMV 181 Query: 189 MTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLT 248 M+ IE +R SK N GPW+T ++ MAKKT I++L KY+P+S+E+QR +S DE + Sbjct: 182 MSVDDIEKIRKRSKTPNEGPWITDYDAMAKKTVIKQLLKYMPLSVELQRKLSTDETTKIE 241 Query: 249 IDP-ADSSVLTGEYSVID 265 + D + ++ +ID Sbjct: 242 LSEHMDEAPDETDWEIID 259 >UniRef50_C9S1B3 RecT protein n=15 Tax=root RepID=C9S1B3_GEOSY Length = 281 Score = 303 bits (776), Expect = 4e-81, Method: Composition-based stats. Identities = 128/268 (47%), Positives = 164/268 (61%), Gaps = 14/268 (5%) Query: 7 IAKADLQKTQ------GNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIAT 60 +A KTQ A + +++ + M ++ ALP+HM A+RM RIA Sbjct: 1 MATNQTLKTQLANKAKNTEAAPPSPAQTIAAYLKK--MGPEIEKALPKHMDADRMARIAL 58 Query: 61 TEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIG 120 T IR P L C S + A++Q +QLGLEPG +GH YL+PF KN K+G+ +VQ IIG Sbjct: 59 TTIRTNPKLLECSVPSLLGAVMQAAQLGLEPG-LIGHCYLVPF--KNGKTGQSDVQFIIG 115 Query: 121 YRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLK 180 Y+GMIDLARRSG I S+ A V D F +E+GL KL+H+P YAVA K Sbjct: 116 YKGMIDLARRSGNIESIYAHAVYSNDTFEYEYGLHPKLVHKPAMTNRGEFIGAYAVAHFK 175 Query: 181 DGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVS 240 DGG QFE M +++IE R SKA NNGPWVT +EEMAKKT IR ++KYLP+SIEIQ+AV Sbjct: 176 DGGYQFEFMPKEEIEKRRKRSKAANNGPWVTDYEEMAKKTVIRHMWKYLPISIEIQQAVV 235 Query: 241 MDE--KEPLTIDPADSSVLTGE-YSVID 265 DE K+ +T DP + E Y VID Sbjct: 236 QDETVKKDITADPEPVDYIEAEAYEVID 263 >UniRef50_Q9AKZ0 Putative uncharacterized protein n=1 Tax=Legionella pneumophila RepID=Q9AKZ0_LEGPN Length = 294 Score = 289 bits (739), Expect = 7e-77, Method: Composition-based stats. Identities = 127/259 (49%), Positives = 172/259 (66%), Gaps = 8/259 (3%) Query: 14 KTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCD 73 + R+ V+ + Q MK ++A LP+H+T ERM RIA TE+RK P L CD Sbjct: 4 QKVDKRSMMVANQKTVMGLLEQ--MKGEIARCLPKHLTPERMARIAMTELRKTPKLQECD 61 Query: 74 TMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQ 133 +SF+++I+Q +QLGLEPG LG YL+PF N K GK + GYRG +DLARRSGQ Sbjct: 62 PLSFIASIMQAAQLGLEPG-ILGSCYLIPFWN--SKLGKFECTFMPGYRGFLDLARRSGQ 118 Query: 134 IASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQ 193 I SL AR V E DEFS+EFGL E +IH+P + + VYAVA LKDGG QF+VM++++ Sbjct: 119 IVSLVARSVYENDEFSYEFGLKENIIHKPAMDNKGQLIAVYAVAILKDGGHQFDVMSKEE 178 Query: 194 IELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKE---PLTID 250 ++ VR SK+ +NGPWVTH+EEMAKKT +RRLFK+LP S+E+Q+AVS+DE + I Sbjct: 179 VDTVRETSKSKDNGPWVTHYEEMAKKTVLRRLFKWLPCSVEMQKAVSLDEMQEAGMQNIK 238 Query: 251 PADSSVLTGEYSVIDNSEE 269 A S ++ + ++ E Sbjct: 239 VAASEEFDIDFVIDADTGE 257 >UniRef50_A8RIH0 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RIH0_9CLOT Length = 266 Score = 284 bits (726), Expect = 2e-75, Method: Composition-based stats. Identities = 99/252 (39%), Positives = 148/252 (58%), Gaps = 11/252 (4%) Query: 13 QKTQGNRAPA-AVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGN 71 Q+ G A KN ++ + +++ ++ ALP +T ER R+A + I P L Sbjct: 11 QRAAGQGASVRLTKNMTIVDMVK--ALEPEIRRALPAVLTPERFTRMALSSINNTPELAE 68 Query: 72 CDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRS 131 C MSF++A++ +QLGLEP + LG AYL+P+ NK GK Q +GY+G+IDLA R+ Sbjct: 69 CTPMSFIAALLNAAQLGLEPNTPLGQAYLIPYKNK----GKLECQFQLGYKGLIDLAYRT 124 Query: 132 GQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTR 191 GQ+ + A+VVRE D F +++GLD KL+H+PGE +T+VY + +L +GG FEV + Sbjct: 125 GQVQIIQAQVVREFDSFEYQYGLDSKLVHKPGEGARGEITYVYGLFKLSNGGYGFEVSNK 184 Query: 192 KQIELV---RSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLT 248 +++ S S PW +E MAKKT I+R+ KY P+S + Q+A+SMDE Sbjct: 185 TEMDTFAARYSKSFGSKYSPWTEDYESMAKKTVIKRVLKYAPISSDFQKALSMDETIKTG 244 Query: 249 IDPADSSVLTGE 260 I D S + E Sbjct: 245 I-AVDMSEIRNE 255 >UniRef50_A9I8T0 Phage-related DNA recombination protein n=11 Tax=Proteobacteria RepID=A9I8T0_BORPD Length = 399 Score = 281 bits (720), Expect = 1e-74, Method: Composition-based stats. Identities = 113/249 (45%), Positives = 159/249 (63%), Gaps = 11/249 (4%) Query: 28 DVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQL 87 V +F S K LAA LP+H++A+RM++IA +R P L NC S + +VQCSQL Sbjct: 10 TVKTFFE--SQKGTLAAVLPKHVSADRMLKIALGAMRTTPKLMNCTLESLLGGVVQCSQL 67 Query: 88 GLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDE 147 GLEP + LGHAYL+PF N+ + G VQ+++GY+G+IDL+RRSGQ+ S++A V E D+ Sbjct: 68 GLEPNTPLGHAYLIPFDNR--RKGITEVQIVLGYKGLIDLSRRSGQVVSIAAHEVCENDK 125 Query: 148 FSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGN-- 205 F + +GLDE+L HRP +E V YAVA+LKDGG FEVM+R Q+E + S+ Sbjct: 126 FDYAYGLDERLDHRPAMDERGKVIAFYAVAKLKDGGHAFEVMSRAQVEKICDESQNYKFA 185 Query: 206 ----NGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPA-DSSVLTGE 260 W H+ EM +KT +RRLFKYLPVSIE+ A ++D+ + D + + GE Sbjct: 186 KDKAGSVWGQHFVEMGRKTVLRRLFKYLPVSIEMATAAALDDLNARGVSQELDINTIDGE 245 Query: 261 YSVIDNSEE 269 ++VI +E Sbjct: 246 FTVIPTGDE 254 >UniRef50_C5EMH8 RecT protein n=3 Tax=Clostridiales RepID=C5EMH8_9FIRM Length = 280 Score = 281 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 101/265 (38%), Positives = 153/265 (57%), Gaps = 12/265 (4%) Query: 9 KADLQKTQ--GNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKV 66 K +L+K KN ++ + +++ ++ ALP +T ER R+A + I Sbjct: 19 KNELEKRAAIQENPVRLTKNMTIVDMVK--ALEPEIRRALPAVLTPERFTRMALSAINNT 76 Query: 67 PALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMID 126 PAL +C MSF++A++ +QLGLEP + LG AY++P+ NK G Q +GY+GMID Sbjct: 77 PALADCTPMSFIAAMMNAAQLGLEPNTPLGQAYMIPYKNK----GVLECQFQLGYKGMID 132 Query: 127 LARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQF 186 LA R+GQ+ + A++VRE D F +++GL+ KL+HRPGEN+ +T +Y + RL +GG F Sbjct: 133 LAYRTGQVQMIQAQIVREYDYFEYQYGLEPKLVHRPGENDRGEITFIYGLFRLINGGYGF 192 Query: 187 EVMTRKQIELV---RSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDE 243 EV + ++ S S PW ++E+MAKKT I+R KY PVS + Q+A+SMDE Sbjct: 193 EVSNKADMDAFAAKYSKSFGSRYSPWTENYEDMAKKTVIKRALKYAPVSADFQKALSMDE 252 Query: 244 KEPLTIDPADSSVLTGEYSVIDNSE 268 I D S + E + E Sbjct: 253 TIKTEI-AVDMSEIRNECLPEPDGE 276 >UniRef50_B9EBP3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EBP3_MACCJ Length = 276 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 115/256 (44%), Positives = 159/256 (62%), Gaps = 14/256 (5%) Query: 23 AVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIV 82 K + ++ + M +A ALP+HM +R+ R+A T IR PAL + D S + A++ Sbjct: 22 QPKPQTIDDYMKK--MAPAMAQALPKHMDIDRLTRLAMTTIRTTPALKDADVGSLLGAVM 79 Query: 83 QCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVV 142 Q +QLGLEPG +GH YLLPF NKN+ G K VQ IIGY+GMIDLARRSG I S+ A V Sbjct: 80 QAAQLGLEPG-LMGHCYLLPFNNKNK--GIKEVQFIIGYKGMIDLARRSGHIKSIYAHAV 136 Query: 143 REGDEFSFEFGLDEKLIHRPG-ENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLS 201 DEF +E GL+ KL+H+P E + YAVA KDGG QFE M++ IE + S Sbjct: 137 YSNDEFDYELGLESKLVHKPTMEPDKGEFIGAYAVAHFKDGGYQFEFMSKADIEKRKGRS 196 Query: 202 KAGNN--GPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTID------PAD 253 KA N+ PW + +EEMAKKT +R ++KYLP+S+E+Q+ V+ DE I P D Sbjct: 197 KAANSKFSPWTSDYEEMAKKTVVRHMWKYLPISVEVQQQVAYDEGTGKDISKIKDVTPDD 256 Query: 254 SSVLTGEYSVIDNSEE 269 + + +Y ++D ++E Sbjct: 257 TLLEAPDYELLDITDE 272 >UniRef50_Q7P5T6 RecT protein n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P5T6_FUSNV Length = 301 Score = 278 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 100/263 (38%), Positives = 149/263 (56%), Gaps = 10/263 (3%) Query: 8 AKADLQKTQGNRAPAAVKNSDVISFINQ-PSMKEQLAAALPRHMTAERMIRIATTEIRKV 66 AK L T N A K + + + + +Q A ALP+H+ ++R +RIA T IR Sbjct: 6 AKNSL--TTNNGATVTKKENKQKTIFDVIQAGAKQFATALPKHINSDRFVRIAITTIRLN 63 Query: 67 PALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMID 126 P L C S + A++ +QLGLEPG+ LG YL+PF NK K+G Q IGY+G+I+ Sbjct: 64 PKLAKCSQESLLGALMVSAQLGLEPGT-LGQCYLIPFENK--KAGTVECQFQIGYKGLIE 120 Query: 127 LARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQF 186 L RRSGQ++ + + V E D+F+ E+GL L+H+P + + YAVA LKDG F Sbjct: 121 LLRRSGQLSDIYSYTVYENDDFNIEYGLSRTLVHKPNFTDRGEIKGFYAVAILKDGAKAF 180 Query: 187 EVMTRKQIELVRSLSKAG--NNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEK 244 E MT+ ++ + G N W ++EEMA+KT +++L K+LPVS+E + DEK Sbjct: 181 EYMTKDEVVKHEEKYRKGSYKNDVWNKNFEEMAQKTVVKKLLKWLPVSVEFLEMAAKDEK 240 Query: 245 EPLTIDPADSSVLTGEYSVIDNS 267 +D D S E +++N+ Sbjct: 241 SFKVVD--DKSTEVQEIEILENN 261 >UniRef50_C9LU62 Protein RecT n=2 Tax=Selenomonas RepID=C9LU62_9FIRM Length = 303 Score = 275 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 99/259 (38%), Positives = 139/259 (53%), Gaps = 11/259 (4%) Query: 11 DLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALG 70 +QK Q R + I SM+ Q+A ALP +T ER R+ T + L Sbjct: 8 AIQKAQEQRMAVQQGARSIKDLI--VSMEGQIAKALPSVLTPERFTRMVLTALSTNQKLR 65 Query: 71 NCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARR 130 C SF+ A++Q +QLG+EP + LG AYL+P+ NK G Q +GY+G++DLA R Sbjct: 66 ECTPQSFLGAMMQAAQLGVEPNTPLGQAYLIPYKNK----GILECQFQLGYKGLLDLAYR 121 Query: 131 SGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMT 190 SG++ + A V E D F +E GL+ KL H P E VTH YA+ + K GG F VM+ Sbjct: 122 SGEVTIIQAHEVYENDVFEYELGLEPKLRHVPTTGEKGAVTHYYAMFKTKSGGYGFHVMS 181 Query: 191 RKQIEL-VRSLSKAGNNG---PWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEP 246 R +++ R S+A G PW T+++EMAKKT ++ KY P+ E RA+S DE Sbjct: 182 RAEVDTFARKYSQAYKKGYSTPWTTNFDEMAKKTVLKACLKYAPIKTEFTRALSTDETIK 241 Query: 247 LTIDPADSSVLTGEYSVID 265 I AD + E I+ Sbjct: 242 TEI-AADMTAAADETDYIE 259 >UniRef50_UPI00016C62AB recombination and repair protein RecT n=1 Tax=Clostridium difficile ATCC 43255 RepID=UPI00016C62AB Length = 277 Score = 269 bits (688), Expect = 7e-71, Method: Composition-based stats. Identities = 102/269 (37%), Positives = 157/269 (58%), Gaps = 17/269 (6%) Query: 8 AKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVP 67 AK L+K V S + + M Q+ ALP +++ER R+A T P Sbjct: 6 AKGALEKKVSGANTVKVSPSKGMEQLMNK-MASQIKKALPSMVSSERFQRVALTAFSNNP 64 Query: 68 ALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDL 127 L +C+ MSF++A+++ +QLGLEP + LG AYL+P+GNK VQ IGY+G+++L Sbjct: 65 RLQSCEPMSFIAAMMESAQLGLEPNTPLGQAYLIPYGNK--------VQFQIGYKGLLEL 116 Query: 128 ARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGEN-EDAPVTHVYAVARLKDGGTQF 186 A+RSG+I ++ A +RE D+F ++GL + L+H P N + + YAV L GG F Sbjct: 117 AQRSGKIKTIYAHKIRENDKFEIKYGLHQDLVHEPKLNGDRGEIIGYYAVYHLDTGGHSF 176 Query: 187 EVMTRKQ-IELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKE 245 MT+++ IE +S SK+ ++GPW T ++ MAKKT I++L KY P+SIE+Q+A+ DE Sbjct: 177 SFMTKEEIIEFAKSKSKSYSSGPWQTDFDSMAKKTVIKQLLKYAPLSIELQKAMVGDETI 236 Query: 246 PLTIDPADSSVLTG------EYSVIDNSE 268 ID S V+ ++ V +N + Sbjct: 237 KSEIDEDMSMVVDESESLEVDFEVKENMD 265 >UniRef50_A7VTD0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTD0_9CLOT Length = 276 Score = 268 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 98/252 (38%), Positives = 140/252 (55%), Gaps = 10/252 (3%) Query: 11 DLQKTQGNR--APAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPA 68 +QK N+ A A +S + ++I + M+ ++ ALP MT ER RI + + P Sbjct: 3 SIQKNVENQELARKAPHDSTMQNYIKK--MEGEIKKALPSVMTPERFTRITLSALSTNPK 60 Query: 69 LGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLA 128 LG SF+ A++ +QLGLEP + LG AYL+PF N +K + Q IGY+G+IDLA Sbjct: 61 LGETTPNSFLGAMMTAAQLGLEPNTPLGQAYLIPFYNGKKK--QLECQFQIGYKGLIDLA 118 Query: 129 RRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGE-NEDAPVTHVYAVARLKDGGTQFE 187 RSG+I+S+ A V E DEF F FGL+ KL H P + + YA ++KDGG FE Sbjct: 119 YRSGEISSIQAHTVYENDEFEFAFGLEPKLKHVPYKGTDKGEPAWFYAAFKMKDGGFGFE 178 Query: 188 VMTRKQIELV---RSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEK 244 VM+ + S S +G+ PW T +EEMAKKT +++ KY P+ + RA + DE Sbjct: 179 VMSVDDVRAHANKYSQSYSGDYSPWKTAFEEMAKKTVLKKALKYAPMKSDFVRASNSDET 238 Query: 245 EPLTIDPADSSV 256 + SV Sbjct: 239 IKTELSDDMFSV 250 >UniRef50_Q38143 35 protein n=1 Tax=Bacillus phage SPP1 RepID=Q38143_BPSPP Length = 287 Score = 266 bits (679), Expect = 6e-70, Method: Composition-based stats. Identities = 101/279 (36%), Positives = 160/279 (57%), Gaps = 17/279 (6%) Query: 2 TKQPPIAKADLQKTQGNRAPAAVKNSD-VISFINQPSMKEQLAAALPRHMTAERMIRIAT 60 TK+ K L + G VK D V ++ + M + LP+H+ A+R+ RIA Sbjct: 3 TKKQEELKNALAQQNGAVPQTPVKPQDKVKGYLER--MMPAIKDVLPKHLDADRLSRIAM 60 Query: 61 TEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIG 120 IR P L CDT S + A+++ ++LG+EPG LG AY+LP+ N +K+ Q I+G Sbjct: 61 NVIRTNPKLLECDTASLMGAVLESAKLGVEPG-LLGQAYILPYTNYKKKT--VEAQFILG 117 Query: 121 YRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGE--NEDAPVTHVYAVAR 178 Y+G++DL RRSG ++++SA+ V + D F +E+GLD+KL+HRP + YAVA+ Sbjct: 118 YKGLLDLVRRSGHVSTISAQTVYKNDTFEYEYGLDDKLVHRPAPFGTDRGEPVGYYAVAK 177 Query: 179 LKDGGTQFEVMTRKQIELVRS-LSKAGN-----NGPWVTHWEEMAKKTAIRRLFKYLPVS 232 +KDGG F VM+++ +E R SK+ N GPW H++ MAKKT +R+L YLP+S Sbjct: 178 MKDGGYNFLVMSKQDVEKHRDAFSKSKNREGVVYGPWADHFDAMAKKTVLRQLINYLPIS 237 Query: 233 IEIQRAVSMDEKEPLTIDP---ADSSVLTGEYSVIDNSE 268 +E V+ DE+ + D +++ + + + + Sbjct: 238 VEQLSGVAADERTGSELHNQFADDDNIINVDINTGEIID 276 >UniRef50_C3WEC1 RecT protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEC1_FUSMR Length = 327 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 96/265 (36%), Positives = 139/265 (52%), Gaps = 14/265 (5%) Query: 8 AKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVP 67 A L K N + I + ++Q AAALP+H+ +ER RIA T IR+ P Sbjct: 7 ATNSLVKGSNGAVTEKKPNKTIYEIIK--AGEKQFAAALPKHLNSERFTRIAITTIRQNP 64 Query: 68 ALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDL 127 L C+ S + +++ +QLGLEPG LG YL+PF KN K G Q +GY+GMI+L Sbjct: 65 KLAECNAESLLGSLMTIAQLGLEPG-VLGQCYLIPF--KNNKLGTIECQFQLGYKGMIEL 121 Query: 128 ARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENE---DAPVTHVYAVARLKDGGT 184 RR+GQ++ + A V DEF E+GLD L H+P + Y+VA LKDG Sbjct: 122 LRRTGQLSDIYAYTVYSNDEFDIEYGLDRTLKHKPAFTNPEGRGEIVGFYSVAILKDGTR 181 Query: 185 QFEVMTRKQIELVRSLSKAGN--NGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMD 242 FE MT+K++ + GN N W ++EEM+ KT +++ K+LP+S+E+ + D Sbjct: 182 AFEYMTKKEVIEHEEKYRKGNFKNEIWNKNFEEMSLKTVTKKMLKWLPISVEMIENLRKD 241 Query: 243 EKEPLTIDPADSSVLTGEYSVIDNS 267 E+ I D ID + Sbjct: 242 EQ----IHKLDEKTNEVTSEYIDEN 262 >UniRef50_C0W9K5 Recombination and repair protein recT n=1 Tax=Acidaminococcus sp. D21 RepID=C0W9K5_9FIRM Length = 290 Score = 257 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 101/237 (42%), Positives = 134/237 (56%), Gaps = 9/237 (3%) Query: 19 RAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFV 78 +A K + I SM+ Q+ AALP +T ER R+ T + P L C SF+ Sbjct: 12 QAGVQTKVHSIKDLI--RSMEPQIKAALPSILTPERFTRMVLTALSSNPKLQECSPQSFL 69 Query: 79 SAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLS 138 A++Q +QLG+EP + LG AYL+P+ N G Q +GY+G+IDLA RSG I +S Sbjct: 70 GAMMQAAQLGVEPNTPLGQAYLIPYRN----HGILECQFQLGYKGLIDLAYRSGSIRDIS 125 Query: 139 ARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVR 198 A VV GD F FE+G + KLIH+P + YAV KDGG F VM+++ IE R Sbjct: 126 AHVVYSGDGFEFEYGFEPKLIHKPAMTDRGTPIAYYAVYHTKDGGGNFVVMSQEDIEKHR 185 Query: 199 -SLSKAGNNG--PWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPA 252 SKA G PW T++EEMAKKT +++L KY P+ E RAV+ DE I P Sbjct: 186 NKFSKAAGQGFSPWGTNFEEMAKKTVLKKLLKYAPLKTEFVRAVATDETVKSNIMPD 242 >UniRef50_B2JU71 RecT protein n=1 Tax=Burkholderia phymatum STM815 RepID=B2JU71_BURP8 Length = 351 Score = 254 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 99/280 (35%), Positives = 157/280 (56%), Gaps = 19/280 (6%) Query: 7 IAKADLQ--KTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRH-MTAERMIRIATTEI 63 +A +++ K + PA +K ++++ + + K+ +AA LP +T +R+ ++A Sbjct: 1 MATTNIKDLKPKPPVDPATLKPKELLAHMLERKRKD-IAAMLPSGPLTVDRLFKLAIVAA 59 Query: 64 RKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKN-----VQLI 118 PAL C+ S V+A+ C+QLGLEP + LGHAYL+PF K + VQ+I Sbjct: 60 TTTPALAKCEIASVVAAVGFCAQLGLEPNTPLGHAYLVPFNTKRKDGNGNEYWVNSVQVI 119 Query: 119 IGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVAR 178 IGYRG I+LARRSGQI S++A VRE D+F++ +GL EKL H P + + YAVA Sbjct: 120 IGYRGYIELARRSGQIVSITAHEVREKDKFTYAYGLREKLDHIPARGDRGEIIGFYAVAM 179 Query: 179 LKDGGTQFEVMTRKQIELVRSLSKAGNNG---------PWVTHWEEMAKKTAIRRLFKYL 229 K GG FE M QI +R S+ PW H+ EM +K+AIRR+ K+L Sbjct: 180 FKGGGHAFEFMDVAQINEIRDGSQGWQQAQKYKKTATHPWQKHFVEMGRKSAIRRIAKFL 239 Query: 230 PVSIEIQRAVSMDEKEPLTIDP-ADSSVLTGEYSVIDNSE 268 P+++++ +A + D + D + + G++S + + + Sbjct: 240 PLTVQLTQAFAADGRTINDAPQLNDPNTIDGDFSWVPDGD 279 >UniRef50_C3KZR3 RecT n=1 Tax=Clostridium botulinum Ba4 str. 657 RepID=C3KZR3_CLOB6 Length = 294 Score = 246 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 93/274 (33%), Positives = 147/274 (53%), Gaps = 23/274 (8%) Query: 10 ADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPAL 69 A+ Q TQ + K + + M ++ A+ + MT ER RIA + P Sbjct: 10 ANKQATQNIQLTPQKKMQNAL-----EKMLPEIKKAVGKTMTPERFSRIALSLFNGNPQF 64 Query: 70 GNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLAR 129 DT SF+SA++Q +Q GLEP + LG AY++P+ KN K G V +GY+G++ +A Sbjct: 65 WEADTTSFLSALMQSAQCGLEPNTVLGEAYVIPY--KNNKQGITEVNFQVGYKGILKMAF 122 Query: 130 RSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVM 189 +G+ ++ A VR+GDEF +E+GL + L+H+P + VTH YAV +LK+GG F V Sbjct: 123 NTGEYEAIYAHEVRKGDEFEYEYGLHKTLVHKPADIPSDEVTHYYAVYKLKNGGFDFVVW 182 Query: 190 TRKQIELV-RSLSKAG-------NNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSM 241 +R+++E R SK N W +++ MAKKT + + KY P S+E+ +A+ M Sbjct: 183 SRERVEHHAREFSKNYTYKGNVNKNSVWAKNFDSMAKKTVLLDVLKYAPKSVEMAKALDM 242 Query: 242 D------EKEPLTIDPADSSVLTGEYSVIDNSEE 269 D E++ + D + E + ID E+ Sbjct: 243 DYKAEAKEEKLNNFNYVDVDTV--EVNNIDTEED 274 >UniRef50_C2CG07 Recombination and repair protein RecT n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CG07_9FIRM Length = 297 Score = 246 bits (627), Expect = 8e-64, Method: Composition-based stats. Identities = 88/261 (33%), Positives = 138/261 (52%), Gaps = 22/261 (8%) Query: 8 AKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVP 67 AK L+K N+ PA K V + SMK ++ ALP ++ E+ +R A T I P Sbjct: 4 AKNALKKNTQNK-PALSKQDTVRGLL--MSMKGEIQNALPSYLPVEKFVRTALTAINSNP 60 Query: 68 ALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDL 127 L NC S ++AI+ +QLGLE + LG AYL+P+G V IGY+G++ L Sbjct: 61 KLANCTQQSLLAAIMNSAQLGLEFNTPLGEAYLIPYG--------STVNFQIGYKGLLKL 112 Query: 128 ARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPG-ENEDAPVTHVYAVARLKDGGTQF 186 A +GQ ++AR VR ++F+ ++G E + H+P + V YA+ + KDGG Sbjct: 113 AYNTGQFKRITAREVRGNEDFAIDYGTGE-ISHKPCLTGDSGEVIGYYAIYQTKDGGQDV 171 Query: 187 EVMTRKQIELV-RSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKE 245 M++ E ++ SK+ +GPW T ++ MAKK+ + ++ KY P +IE Q + Sbjct: 172 FYMSKADAERYGKTYSKSFYSGPWKTDFDSMAKKSCLIQVLKYAPKAIESQGLIQA---- 227 Query: 246 PLTIDPADSSVLTGEYSVIDN 266 ++ D A+ TG +DN Sbjct: 228 -MSFDNAN---FTGSQKTVDN 244 >UniRef50_C4VG97 RecT family protein n=19 Tax=root RepID=C4VG97_ENTFA Length = 297 Score = 238 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 121/263 (46%), Gaps = 14/263 (5%) Query: 13 QKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNC 72 Q +Q N+ + +N P+MK + L H A + T + L Sbjct: 10 QLSQQNQKQVPANQLGLKGLMNTPTMKRKFEEVL--HENANAFMSNVMTLVSNDSYLAES 67 Query: 73 DTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKN--VQLIIGYRGMIDLARR 130 + MS +S + + L L LG+AYL+PF KN+++GK Q I+GY+G I LA+R Sbjct: 68 EPMSILSGALTAATLNLGLDKNLGYAYLVPFNTKNKQTGKWERKAQFILGYKGYIQLAQR 127 Query: 131 SGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMT 190 SG+ +L+ V EG+ S+ L E+ P + V L +G + T Sbjct: 128 SGKYKALNVIEVYEGELLSWNR-LTEEFEFDPNGRQSDDVIGYVGYFELLNGFKKTVYWT 186 Query: 191 RKQIELVR-----SLSKAGNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDEK 244 +++IE R K +G W T + MA+KT +R + K+ +SIE+Q A + DEK Sbjct: 187 KQEIEAHRIANSKDKEKTKLSGVWATDYNAMARKTVLRNMLSKWGILSIEMQEATTSDEK 246 Query: 245 EPLTIDPADSSVLTGEYSVIDNS 267 + + + E V +N+ Sbjct: 247 VQQMQEDGN---IISETEVEENT 266 >UniRef50_C5V0B4 RecT protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0B4_9PROT Length = 350 Score = 236 bits (601), Expect = 8e-61, Method: Composition-based stats. Identities = 96/270 (35%), Positives = 138/270 (51%), Gaps = 29/270 (10%) Query: 14 KTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCD 73 + N A + + + + Q K ++ ALP+H+ +RM+RIA T R P L +CD Sbjct: 10 RNTNNNAGKSEQQQGFPAMLEQ--FKGEITRALPKHINPDRMVRIALTAFRMTPKLADCD 67 Query: 74 TMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQ 133 S +A++Q SQLGLE G +G A+L+PFG QLI GY G++ LAR+SG Sbjct: 68 PRSVFAAVIQSSQLGLEVG-LMGEAHLVPFGG--------QCQLIPGYTGLMKLARQSGL 118 Query: 134 IASLSARVVREGDEFSFEFGLDEKLIHRP---------GENEDAPVTHVYAVARLKDGGT 184 + + A VR D+F+ + G++ L H P + E V YAV LKDG Sbjct: 119 VIDIYAEAVRINDKFALKLGMERNLEHEPLTAPGGFPASDEERGDVVGFYAVGVLKDGSR 178 Query: 185 QFEVMTRKQIELVRSLS-------KAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQR 237 F M RK++E +R S K W T + M KTAIRR+ K+LP S E+ Sbjct: 179 TFVAMGRKEVERIRDGSRGYQAAKKYKKESTWDTDFVAMGLKTAIRRICKFLPKSPELAT 238 Query: 238 AVSMDEKEPLTIDPADSSVLTGEYS-VIDN 266 A++MDE+ D V+ G Y+ V+D Sbjct: 239 ALAMDEQAGRQNLNLD-DVINGSYTPVVDE 267 >UniRef50_C0ZFI5 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZFI5_BREBN Length = 314 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 92/308 (29%), Positives = 146/308 (47%), Gaps = 43/308 (13%) Query: 1 MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIAT 60 M++ + ++ L R +N + + + + + +P+HMT ER+ RI Sbjct: 1 MSEAKTVNQSALAGQLAQRTMTKAENFNAVIKKELADNFQAIKSLVPKHMTPERLARITL 60 Query: 61 TEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIG 120 T I + PAL +C S V A++ C+ LGLEP +GHAYL+PF KN ++ + Q IG Sbjct: 61 TAISRTPALIDCTPASIVGAVMNCATLGLEPN-LIGHAYLVPF--KNNRTKQMECQFQIG 117 Query: 121 YRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGE---------------- 164 Y+G IDL RR+G ++ + A V E D F + G D++L+H P + Sbjct: 118 YKGQIDLIRRTGDVSKIYAETVYENDLFIYIKGEDKRLVHVPFDMLHHLENFTPSKDDFM 177 Query: 165 ----------------NEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVR-SLSKAGNN- 206 N+ Y+ RLKDG F MT +Q + + S A + Sbjct: 178 DIMMAQAIGAIKSRGANDQGKPVRYYSAYRLKDGAFDFVTMTAEQCQKHAMTHSAAKKDG 237 Query: 207 ---GPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDE---KEPLTIDPADSSVLTGE 260 GPW H+E M KKT I+ + KY+P+SIE+Q +S DE K ++ + Sbjct: 238 KLVGPWKDHFESMCKKTCIKEMAKYMPISIEVQEKLSTDEAVLKLRKDNGIESDNIFDVD 297 Query: 261 YSVIDNSE 268 Y +++ + Sbjct: 298 YKIVEEGQ 305 >UniRef50_P45908 Uncharacterized protein yqaK n=15 Tax=root RepID=YQAK_BACSU Length = 284 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 66/266 (24%), Positives = 121/266 (45%), Gaps = 18/266 (6%) Query: 9 KADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPA 68 K ++QK Q N P + + + ++ PS+ ++ L + A + + Sbjct: 8 KNNIQKKQKN-VPVQQQGATMKGLLSSPSVIKRFEEVLGKR--ATQFTASILSLYNSEQM 64 Query: 69 LGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLA 128 L D MS +S+ + + L L LG+A+++P+G K Q +GY+G I LA Sbjct: 65 LQKTDPMSVISSAMVAATLDLPIDKNLGYAWIVPYGGK--------AQFQLGYKGYIQLA 116 Query: 129 RRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEV 188 R+GQ S++ + EG+ + L E++ + E V A L +G + Sbjct: 117 LRTGQYKSINCIPIHEGELQKWN-PLTEEIEIDFEKRESDAVIGYAAYFELINGFRKTVY 175 Query: 189 MTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDEKEPL 247 T+ Q+E + + G W W+ MA KT ++ + K+ +S+E+Q+AV +++ Sbjct: 176 WTKAQVEKHKKKFSKSDFG-WKNDWDAMALKTVLKAVLSKWGILSVEMQKAVIEEDETRE 234 Query: 248 TID----PADSSVLTGEYSVIDNSEE 269 ID S ++ E S D +E+ Sbjct: 235 RIDITNEADSSEIIDSEPSNKDETEK 260 >UniRef50_C9AMX6 Recombinase n=11 Tax=Enterococcus faecium RepID=C9AMX6_ENTFC Length = 312 Score = 229 bits (585), Expect = 6e-59, Method: Composition-based stats. Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 14/274 (5%) Query: 7 IAKADLQKTQ---GNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEI 63 +A + K Q + A + + +N P+M+++ L H A + T + Sbjct: 1 MATNESLKNQLAEKPQKQVAPGQLGLKALMNTPTMRKKFEEVL--HDNANAFMSNVMTLV 58 Query: 64 RKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGK--KNVQLIIGY 121 L + + MS +S + + L L LG+AYL+PF +KN+++GK K Q ++GY Sbjct: 59 SNDNYLADSEPMSIMSGALTAATLNLGLDKNLGYAYLVPFNSKNKQTGKWEKKAQFMLGY 118 Query: 122 RGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKD 181 +G I LA+RSG+ +L+ V EG+ S+ L E+ P V L + Sbjct: 119 KGYIQLAQRSGKYKALNVIEVYEGELKSWNR-LTEEFEFDPNGRTSDEVIGYVGYFELLN 177 Query: 182 GGTQFEVMTRKQIELVR-----SLSKAGNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIEI 235 G + T+++IE R K +G W + + MA+KT +R L K+ +SIE+ Sbjct: 178 GFKKTVYWTKQEIEAHRIGNNKDRDKTKLSGVWASDYNAMARKTVLRNLLSKWGILSIEM 237 Query: 236 QRAVSMDEKEPLTIDPADSSVLTGEYSVIDNSEE 269 Q A + DE+ + T I +E Sbjct: 238 QEATTSDERVQRVQEDGSIIAETEVEEDIPERKE 271 >UniRef50_B3WCF3 RecT protein n=2 Tax=Lactobacillus casei group RepID=B3WCF3_LACCB Length = 295 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 80/275 (29%), Positives = 134/275 (48%), Gaps = 19/275 (6%) Query: 7 IAKADLQKTQGNRAPAAVKNSD---VISFINQPSMKEQLAAALPRHMTAERMIRIATTEI 63 +A LQK + A K+S V ++ P+M+++ L + +A++ + Sbjct: 1 MATTSLQKQLNEVSQAKGKSSAGSVVKDLLSAPAMQKRFNEVLGK--SAQQFTSSIINVV 58 Query: 64 RKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGK--KNVQLIIGY 121 L D MS +S+ + + L L LG+ Y++PF K++ +GK K Q +GY Sbjct: 59 NSSQQLQGVDAMSVISSAMVAATLNLPIDPNLGYMYIVPFNEKDKATGKYLKRAQPQMGY 118 Query: 122 RGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKD 181 RG I LA R+GQ S++AR V EG+ +++ + GE V L + Sbjct: 119 RGYIQLALRTGQYKSINARAVHEGEITNWDP---FSETYERGEKTSDKVVGYVGHFELLN 175 Query: 182 GGTQFEVMTRKQIELVRS-LSKAGN-----NGPWVTHWEEMAKKTAIRRLF-KYLPVSIE 234 G + T ++++ R SK+GN +G W ++++ MA KT IR L K+ +SI+ Sbjct: 176 GFQKTTYWTVEEMDQHRKLYSKSGNYNGQRSGVWKSNFDAMATKTVIRDLLSKWGILSIQ 235 Query: 235 IQRAVSMDEKEPLTIDPADSSVLTGEYSVIDNSEE 269 +Q AV DEK P D A++ L+ + N+ E Sbjct: 236 MQDAVVKDEK-PQVYD-AETGELSTDPKWASNATE 268 >UniRef50_A0QB14 YqaK protein n=4 Tax=root RepID=A0QB14_MYCA1 Length = 370 Score = 226 bits (576), Expect = 6e-58, Method: Composition-based stats. Identities = 96/267 (35%), Positives = 140/267 (52%), Gaps = 20/267 (7%) Query: 14 KTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCD 73 K R A + + + I Q M++Q A+PR + A +++R A T ++ P L C+ Sbjct: 7 KPVAQRRTVAQAENSLQNKIRQ--MEQQFQLAMPRGVEAVQLVRDALTCLQSNPKLAECE 64 Query: 74 TMSFVSAIVQCSQLGLEPG-SALGHAYLLPFGNK-----NEKSGKKNVQLIIGYRGMIDL 127 S + A++ C+QLGL PG S LG AYLLPF +K N G QL+IGY+G ++L Sbjct: 65 HKSVLGALMTCAQLGLRPGVSVLGQAYLLPFWDKNLERPNGGKGGFRAQLVIGYQGYVEL 124 Query: 128 ARRSGQIASLSARVVREGDEFSFEFG-LDEKLIHRPG-ENEDAPVTHVYAVARLKDGGTQ 185 A RSG+IASL AR V D F E+G ++K +HRP + V YAV R DGG + Sbjct: 125 AYRSGRIASLHARRVYANDYFEIEYGAAEDKWVHRPYLDGPRGDVKLYYAVGRTVDGGYR 184 Query: 186 -FEVMTRKQIELVRSLSKAGNN------GPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRA 238 + ++ ++ R + GPWV H++ MA KT IR L K LP S E Q+A Sbjct: 185 ITDPVSVADMQAYRDRHATAKDRNGKVVGPWVDHFDAMADKTMIRTLMKLLPKSTEQQQA 244 Query: 239 VSMDEKEPLTIDPADSSVLTGEYSVID 265 ++ D + + P + E +D Sbjct: 245 IAHDGGVRVDVTP---DAINTEPDYVD 268 >UniRef50_Q2G4T8 Rect protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G4T8_NOVAD Length = 294 Score = 219 bits (558), Expect = 7e-56, Method: Composition-based stats. Identities = 88/236 (37%), Positives = 125/236 (52%), Gaps = 14/236 (5%) Query: 20 APAAVKNSDVISF-INQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFV 78 A AA +NS V N +M + AALP H+T E+ R+A T I P L D S Sbjct: 2 ASAARENSPVAVVKQNLTAMAPEFRAALPAHVTVEKFTRVAQTAILSNPNLMRADRASLF 61 Query: 79 SAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLS 138 +I + +Q GL P A L+ FG + VQ + G++ R+SG++A +S Sbjct: 62 GSITKLAQDGLLPDGR--EAALVMFG--------QQVQAMPMIAGVLKKIRQSGEVAKIS 111 Query: 139 ARVVREGDEFSFEFGLDEKLIHRPG--ENEDAPVTHVYAVARLKDGGTQFEVMTRKQIEL 196 A+VV E D F +G DE + H P + YA A LKDG EVM+ ++I+ Sbjct: 112 AQVVHENDHFVVSYGFDEDVTHNPPPLDKPRGKAIGAYATAVLKDGSRMLEVMSLEEIDK 171 Query: 197 VRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAV-SMDEKEPLTIDP 251 VR++S+AG +GPWV W EMA+KT +RRL K LP+S +++ V S D+ P Sbjct: 172 VRAVSRAGKSGPWVQWWGEMARKTVMRRLSKRLPMSTDLEEEVFSRDDTMTTEFRP 227 >UniRef50_Q4QKZ2 Predicted recombinational DNA repair protein, RecE pathway n=12 Tax=Pasteurellaceae RepID=Q4QKZ2_HAEI8 Length = 306 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 70/267 (26%), Positives = 109/267 (40%), Gaps = 25/267 (9%) Query: 9 KADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPA 68 +Q Q + PA + +F +++ ++ + + A Sbjct: 2 TNQVQHQQNKQPPA------LKTFFESANVQNKIKELVGK--NAATFATSVMQIANSNAM 53 Query: 69 LGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLA 128 L D MS +A + L L + LG AY++PF N EK K Q IGY+G I LA Sbjct: 54 LKTADPMSIFNAACMAATLNLPLQNGLGFAYIVPFRNNKEK--KTEAQFQIGYKGFIQLA 111 Query: 129 RRSGQIASLSARVVREGDEFSFEF--GLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQF 186 +RSGQ L A V + +F G + P +NE+ YA +L + + Sbjct: 112 QRSGQFKRLVALPVYKKQLIKKDFINGFEFDWEQEPEQNEN--PIGYYAYFKLVNDFSAE 169 Query: 187 EVMTRKQIELV---RSLSKAGNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMD 242 M+ I S + G W ++E MA KT + L K P+S+E+Q+AV D Sbjct: 170 LYMSHDDIVKHAQRYSQTFKKGYGVWHDNFEAMALKTVTKLLLSKQAPLSVEMQQAVLAD 229 Query: 243 EKEPLTIDPADSSVLTGEYSVIDNSEE 269 + V E++ DN +E Sbjct: 230 Q-------AVVKDVENQEFNYTDNIQE 249 >UniRef50_B3WDD8 RecT protein n=3 Tax=Lactobacillus casei group RepID=B3WDD8_LACCB Length = 287 Score = 216 bits (550), Expect = 6e-55, Method: Composition-based stats. Identities = 72/252 (28%), Positives = 122/252 (48%), Gaps = 21/252 (8%) Query: 24 VKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQ 83 +K V I ++K + AA L + A + + + + P+L D +S +++ + Sbjct: 7 LKKMPVKKLIETQTIKNKFAALLDKR--APQFLSSIASAVSLNPSLARVDQLSVINSALV 64 Query: 84 CSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVR 143 + L L +LG Y++P+ N Q IGY+G I LA+RSG+ L+A + Sbjct: 65 AATLDLPVNPSLGFVYIVPYKN--------QAQPQIGYKGYIQLAQRSGRYQRLTALPIY 116 Query: 144 EGDEFSFEFGLDEKLIHRPGENEDA---PVTHVYAVARLKDGGTQFEVMTRKQIELVRSL 200 E DEF L E+L + P ++ A +L +G + T +Q++ R Sbjct: 117 E-DEFKSWNPLTEELEYTPNFHDRKASEKPVGYAASFKLTNGFEKMVYWTYQQVDDHRKR 175 Query: 201 -SKAGNN----GPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDEKEPLTIDPADS 254 SK+G + G W ++E MA KT I+ L K+ P++ ++Q AVS DEK P+ DP Sbjct: 176 FSKSGGSAEPKGVWKDNYEAMALKTVIKSLLTKWGPMTTDMQSAVSADEK-PVEADPELK 234 Query: 255 SVLTGEYSVIDN 266 V + + I++ Sbjct: 235 DVTPEDPNSIED 246 >UniRef50_C0A3T3 Recombinational DNA repair protein (RecE pathway)-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A3T3_9BACT Length = 471 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 117/239 (48%), Gaps = 13/239 (5%) Query: 26 NSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCS 85 ++ +P+ +E++ A +P M+ +R R+ T+ I + P L NC+ +SF + + C+ Sbjct: 10 QERALTVWAKPTTQEKIKALVPATMSFDRFARLTTSLIHRNPELANCEPVSFFACLSDCA 69 Query: 86 QLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREG 145 +G+ P G AYL+P N K K L++GY+G+ +A RS I + VVR G Sbjct: 70 TIGVYPDPVTGQAYLIPRWN--SKKQIKECTLLVGYKGLRTIALRSPDIVDIWTGVVRVG 127 Query: 146 DEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAG- 204 D +++IH P +E V Y+ + L+ GGT +E M + VR + A Sbjct: 128 DTLKLIKAPRQEIIHEPLPDEAGEVIGYYSCSSLRGGGTSYEWMPVATVRKVRDEALAKI 187 Query: 205 ------NNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVS----MDEKEPLTIDPAD 253 PWVT EEM +KT +RR FK LP+ E Q AV D K P D Sbjct: 188 KEDWKREQSPWVTWEEEMGRKTVLRRHFKSLPLRPEDQEAVQRELDDDLKNVTGTAPED 246 >UniRef50_B1KTX5 RecT family protein n=2 Tax=Clostridium botulinum RepID=B1KTX5_CLOBM Length = 306 Score = 212 bits (540), Expect = 9e-54, Method: Composition-based stats. Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 8/235 (3%) Query: 38 MKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGH 97 +KE+L L + + + P L C+ M+ +S+ V + L L +G Sbjct: 22 IKERLNEILGKKTPG---FVSSMINVSNSPTLKECEPMTVISSAVVAATLDLPIDPNIGF 78 Query: 98 AYLLPFGNKNEKSGK--KNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLD 155 AY++P+ K++K+GK K Q +GYRG + LA R+ Q +++ V G S+ L Sbjct: 79 AYVVPYNCKDKKTGKWIKKAQFQLGYRGYVQLALRTSQYKNINVVEVYRGQLASWN-PLT 137 Query: 156 EKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQI-ELVRSLSKAGNNGPWVTHWE 214 E+L E V +L +G + ++ + + SK ++GPW ++ Sbjct: 138 EELQFDFDNKESDEVIGYAGFFKLTNGFEKVVYWKKEDVLNHAKKYSKTFSSGPWKDDFD 197 Query: 215 EMAKKTAIRRLF-KYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDNSE 268 MAKKT ++ + K+ +SIE+Q + D+ S L +DN + Sbjct: 198 SMAKKTVLKDMIKKWGILSIEMQTGIKADQAVIKEGIVNKDSGLDENIDYVDNPQ 252 >UniRef50_C5WGX9 RecT protein n=7 Tax=Streptococcus RepID=C5WGX9_STRDG Length = 308 Score = 209 bits (531), Expect = 9e-53, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 117/246 (47%), Gaps = 16/246 (6%) Query: 23 AVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIV 82 + F N P++++ T + + ++ +L + S +A + Sbjct: 4 QLSTYTHKQFFNAPTIQKAFDDVWKGAGT--QFAVSILSVLQGSQSLKSASNESIYAAAM 61 Query: 83 QCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVV 142 + + L L +LG AYL+P+ K Q +GY+G+I+LA+RSGQ +++A +V Sbjct: 62 KAAVLNLPIEPSLGRAYLVPY--------KGQAQFQLGYKGLIELAQRSGQYKNINAGIV 113 Query: 143 REGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELV-RSLS 201 + S+ +E L+ + +A +L +G + T +++ + S Sbjct: 114 YKSQLISYNPLFEELLL--DFSKPQDEIVGYFAAFKLLNGFEKVSFWTVEKVTAHGKKFS 171 Query: 202 KAGNNGPWVTHWEEMAKKTAIRR-LFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGE 260 K+ +GPW T ++ MA+KT ++ L KY P+S+E+Q+A+ D ++ P D + E Sbjct: 172 KSFASGPWKTDFDAMAQKTILKDILSKYGPLSVEMQKAIEEDNQDSTISTPKD--ITPQE 229 Query: 261 YSVIDN 266 + +D+ Sbjct: 230 ANSLDD 235 >UniRef50_B8IIR3 RecT protein n=3 Tax=Methylobacterium RepID=B8IIR3_METNO Length = 320 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 77/210 (36%), Positives = 107/210 (50%), Gaps = 12/210 (5%) Query: 18 NRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSF 77 R PAA N V+ S + + AAALP H+ ER RI T ++ P L + SF Sbjct: 9 ERNPAA--NPLVLVREQIQSREAEFAAALPAHIPVERFKRILLTAVQNNPDLLKLERRSF 66 Query: 78 VSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASL 137 +A ++ +Q GL P G ++ F + Q + G+ R SG++++ Sbjct: 67 FNAAMRAAQDGLLPDGREG--AIVEFNGR--------AQWMPMIAGIRKKVRNSGEVSTW 116 Query: 138 SARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELV 197 A VV E DEF ++ G D K+IHRP Y++A LK G EVMT ++IE V Sbjct: 117 EANVVFENDEFEYQLGDDPKIIHRPALVNRGKPIAAYSIAVLKSGERSREVMTVEEIEKV 176 Query: 198 RSLSKAGNNGPWVTHWEEMAKKTAIRRLFK 227 R +S+A N GPW WEEMA+KT RR K Sbjct: 177 RKVSRARNGGPWSQWWEEMARKTVARRHSK 206 >UniRef50_C0YSU1 Probable RecT protein n=2 Tax=Flavobacteriaceae RepID=C0YSU1_9FLAO Length = 289 Score = 204 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 62/260 (23%), Positives = 114/260 (43%), Gaps = 22/260 (8%) Query: 21 PAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSA 80 +A ++ NQ +++E+ L + A+ I + L N D M+ +A Sbjct: 1 MSATNQKSALTLFNQTNVQEKFEKLLGK--KAQGFISSVLQIVNGNKLLQNADPMTVYNA 58 Query: 81 IVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSAR 140 + L L LG A+++P+ K + Q +G++G + LA R+ Q +++ Sbjct: 59 AATAAVLDLPINPNLGFAWIVPY--------KGSAQFQMGWKGFVQLALRTNQYQNINTT 110 Query: 141 VVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQ-IELVRS 199 V E SF L E+L + + +LK G ++ ++++ I + Sbjct: 111 EVYENQFKSFNR-LTEELEADFDVQGEGEIVGYAGYMKLKSGFSKTTYWSKEEVITHAKK 169 Query: 200 LSKA---GNNGPWVT--HWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMD---EKEPLTID 250 S+A G+ PW + MAKKT ++ L K+ +S+E+Q A D +KE + D Sbjct: 170 YSQAYGKGSMSPWNDKEQFHAMAKKTVLKNLISKWGIMSVEMQNAHLADQSVQKEMGSYD 229 Query: 251 PADSS-VLTGEYSVIDNSEE 269 DSS + E ++ E+ Sbjct: 230 YVDSSNTIDIEAENVNEEEK 249 >UniRef50_C5IHJ8 Gp06 n=2 Tax=unclassified Podoviridae RepID=C5IHJ8_9CAUD Length = 342 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 19/264 (7%) Query: 13 QKTQGNRAPAAVKNSDVISFINQ--PSMKEQLAAALPRHMTAERMIRIATTEIRKVPALG 70 ++ + PA K + I F + ++ ++ ALP + +R IR T ++ P L Sbjct: 3 EQMSNEQQPAEQKPTPYIEFREKLNRGIRVEIEKALPPDIDVDRFIRTVLTSVQMNPDLL 62 Query: 71 NCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKN---------VQLIIGY 121 + S ++A ++ +Q GL P A L + K + N VQ + Sbjct: 63 YANRQSLMNACMRAAQDGLFPDGR--EAVLNIYNTKVKVRDGNNRLIEEWVPMVQYLPMV 120 Query: 122 RGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRP--GENEDAPVTHVYAVARL 179 RG++ + R SG++A++ A V D F F G D ++ H P G+++ PV Y + +L Sbjct: 121 RGILKVMRNSGEVANIDAAAVYAKDHFRFVRGDDPRIEHEPYLGDDDPGPVVAAYMIVKL 180 Query: 180 KDGGTQFEVMTRKQIELVRSLSKA--GNNGPWVTHWEEMAKKTAIRRLFKYLPVSIE-IQ 236 +G + EVM R+ IE R SK G N PW +++MA K I+R K LP S + + Sbjct: 181 SNGEVRREVMPRRDIEKTRLASKNAEGANSPWTKWYDQMAIKGVIKRGAKLLPASSDRLD 240 Query: 237 RAVSMDEKEPLTIDPADSSVLTGE 260 R + D E D + + Sbjct: 241 RVIDHDN-EASGFDAFNQRGVDAS 263 >UniRef50_B3H0V7 Possible phage recombinase n=6 Tax=Proteobacteria RepID=B3H0V7_ACTP7 Length = 318 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 29/260 (11%) Query: 23 AVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIV 82 + + ++K++L L + A + L N D MS +A Sbjct: 14 KQDKFPIKTLFESQNVKQKLQELL--NKNASTFTTSVLQIVNSNSMLRNADPMSVFNAAC 71 Query: 83 QCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVV 142 + L L + LG AY++P+ NK E+ K Q +GY+G+I LA+RSGQ L A V Sbjct: 72 MAATLNLPLQNGLGFAYIVPYQNKKER--KTEAQFQLGYKGLIQLAQRSGQFKRLVAVPV 129 Query: 143 REGDEFSFE--FGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELV-RS 199 E + + G + +P NE YA +L + T MT +++ + Sbjct: 130 YEKQLINEDPINGYEFDWKQKPEANE--KPVGYYAYFQLVNTFTAELYMTAFEVDQHAQR 187 Query: 200 LSKA------------GNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDEKEP 246 S+ W ++E MA KT ++ L K P+S+E+Q+AV D+ Sbjct: 188 YSQTYRTYLDKKAKGQWATSVWADNFEAMALKTVMKLLLSKQAPLSVEMQQAVLADQAVV 247 Query: 247 LTIDPADSSVLTGEYSVIDN 266 +D E+S DN Sbjct: 248 KDVD-------NSEFSYPDN 260 >UniRef50_A7A5B7 Putative uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5B7_BIFAD Length = 287 Score = 201 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 76/225 (33%), Positives = 120/225 (53%), Gaps = 16/225 (7%) Query: 40 EQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSA--LGH 97 Q+A + ++ +E ++++ + I + PAL +C +S +S +QC+ LGL P LG Sbjct: 31 PQIARVIGGNLDSEALLQMCISSINRTPALADCTPVSVLSCFMQCAALGLRPSDVDGLGQ 90 Query: 98 AYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLD-- 155 AY+LP+GNKN +G+K +IGY+GM+ L SG A R V E D + + Sbjct: 91 AYILPYGNKNYATGEKQATFVIGYKGMLKLLENSGIYA--QPRAVYEDDNIKLKLDENGV 148 Query: 156 -----EKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGN----- 205 ++ ++ + + VY +L +GG + M+++ + R N Sbjct: 149 PTIECPDEVNVDADHSEDKLKFVYLSVQLPNGGRYADYMSKRDLLEYREKYAPRNRSRQI 208 Query: 206 NGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTID 250 GPWV ++ EMAKKT IRR FKYLPV+IE ++A S+DE P D Sbjct: 209 TGPWVKNFVEMAKKTIIRRSFKYLPVNIEAKKAASVDETTPDYSD 253 >UniRef50_C0CR08 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CR08_9FIRM Length = 342 Score = 201 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 70/289 (24%), Positives = 119/289 (41%), Gaps = 32/289 (11%) Query: 12 LQKTQGNRAPAAVKNSDV--ISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPAL 69 + + + + A K V +++ +KEQ+ + A R I + ++ L Sbjct: 1 MAENKNTQVVAQQKPVKVGITGYLSNEKVKEQIVNVVGE-KNATRFISSVVSAVQTNANL 59 Query: 70 GNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKK----------NVQLII 119 C S SA + L L P LG Y++P+ N + K Q I Sbjct: 60 QKCTNASIFSAALLGESLQLTPSPQLGQFYMVPYENNKMVTDPKTGRETKVKVNEAQFQI 119 Query: 120 GYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDE---KLIHRPGENEDAPVTHVYAV 176 GY+G I LA RSGQ + V++G+ F +E + + ++ PV Y + Sbjct: 120 GYKGYIQLAIRSGQYRKIVVSDVKDGEVGFFNPITEEFGMNPVLDMEKRQELPVVGYYGM 179 Query: 177 ARLKDGGTQFEVMTRKQIELV-RSLSKAGNN--------GPWVTHWEEMAKKTAIRRLF- 226 L +G + ++Q+E ++ SK + W +++ MAKKT IR+L Sbjct: 180 FELTNGFRKELYWPKEQMEKHAKTYSKGYASDLRKNTSYTFWTKNFDAMAKKTLIRQLIS 239 Query: 227 KYLPVSIEIQRAVSMD------EKEPLTIDPADSSVLTGEYSVIDNSEE 269 K+ +SIE+QRA D + +D V E + +NS + Sbjct: 240 KWGIMSIEMQRAYEADMGVLDEDGTVRYVDNDSDIVAEVEAEISENSNK 288 >UniRef50_D2L6Y9 RecT protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L6Y9_9DELT Length = 324 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 85/272 (31%), Positives = 123/272 (45%), Gaps = 31/272 (11%) Query: 17 GNRAPAAVKNSDVISFINQPSMKEQLAAALP----RHMTAERMIRIATTEIRKVPALGNC 72 P + V + I Q +A + R AER R+A T IR L C Sbjct: 3 NGNLPQESGGASVAALIQQQIPAIAMAVSGGTKEERQKRAERFARVALTTIRNNDKLAQC 62 Query: 73 DTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSG 132 S + A++ + L LE G AYL+P+G + QL IGY+G+ +LA R+G Sbjct: 63 RVESLLGALMTSASLNLEIDPR-GLAYLIPYG--------REAQLQIGYKGIKELAYRAG 113 Query: 133 QIASLSARVVR----EGDEFSFEFGLDEKLIHR----PGENEDAPVTHVYAVARLKDGGT 184 I ++ A VV E F+ E GL L H+ E + + YAVA ++DG Sbjct: 114 GIKAIYAEVVYKPEVEAGMFTIEIGLSRSLTHKLDPLRPELRNGDLVLAYAVAEMEDGRR 173 Query: 185 QFEVMTRKQIELVRSLSKAGNNGP---WVTHWEEMAKKTAIRRLFKYLPVSIE--IQRAV 239 F R ++E R SK P W EEM +KTA+++L K LP S E + +AV Sbjct: 174 HFAYCLRDEVEKRRKTSKMNTASPDSTWGKWAEEMWRKTAVKKLCKDLPQSTEDAMAKAV 233 Query: 240 SMDEKE----PLTID-PADSSVLTGEYSVIDN 266 ++D++ P T D P D +T E + Sbjct: 234 ALDDQAEAGVPQTFDLPKDFIDVTPEPKTASD 265 >UniRef50_Q854T9 Gp61 n=1 Tax=Mycobacterium phage Che9c RepID=Q854T9_9CAUD Length = 353 Score = 196 bits (499), Expect = 6e-49, Method: Composition-based stats. Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 25/273 (9%) Query: 7 IAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRK- 65 +A+ + K +AP + + QLA A+P+ M +R+ RI TEIRK Sbjct: 1 MAENAVTKQDSPKAPETISQV-------LQVLVPQLARAVPKGMDPDRIARIVQTEIRKS 53 Query: 66 ---------VPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQ 116 +L +C SF A++ + LGLEPG G YL+P+ ++ + G Q Sbjct: 54 RNAKAAGIAKQSLDDCTQESFAGALLTSAALGLEPGVN-GECYLVPY--RDTRRGVVECQ 110 Query: 117 LIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAV 176 LIIGY+G++ L + + + + A+ V DEF + GL+ L H + + + YA+ Sbjct: 111 LIIGYQGIVKLFWQHPRASRIDAQWVGANDEFHYTMGLNPTLKHVKAKGDRGNPVYFYAI 170 Query: 177 ARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQ 236 + ++V T +I +R K G++G M +KTA++++ K P + + Sbjct: 171 VEVTGAEPLWDVFTADEIRELR-RGKVGSSGDIKDPQRWMERKTALKQVLKLAPKTTRLD 229 Query: 237 RAVSMDEKEPLTIDPAD----SSVLTGEYSVID 265 A+ D++ + + S + ID Sbjct: 230 AAIRADDRPGTDLSQSQALALPSTVKPTADYID 262 >UniRef50_A8RCV0 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=A8RCV0_9FIRM Length = 304 Score = 196 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 65/285 (22%), Positives = 117/285 (41%), Gaps = 34/285 (11%) Query: 16 QGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTM 75 Q N + I S+++ + L +++ + ++ + P L CD Sbjct: 4 QNNLSAQGTGKRKFSVVIQSESIQKLINNTLGDTKKSQKFVTAISSAVAVNPQLQECDGF 63 Query: 76 SFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIA 135 S V+A + L L P LGH Y++PF +KN+ K +GY+G + LA RSGQ Sbjct: 64 SIVNAALLGETLQLSPSPQLGHYYMVPFNDKNK---GKVATFELGYKGYLQLAIRSGQYK 120 Query: 136 SLSARVVREGDEFSFEFGLDE---KLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRK 192 ++ +++G+ +F+ +E LI E E A YA+ L +G + +++ Sbjct: 121 KINVLEIKKGELINFDPLNEELEINLIQDELEREKAETIGYYAMFELVNGFKKALYWSKE 180 Query: 193 QI-ELVRSLSKAGN--------------------NGPWVTHWEEMAKKTAIRRLF-KYLP 230 ++ S A N + W ++ MA KT +R+L K+ Sbjct: 181 KMLSHADKYSAAFNAKSYNDLMTGKILDKDKWKYSSFWYKDFDGMAFKTMLRQLISKWGI 240 Query: 231 VSIEIQRAVSMDEK------EPLTIDPADSSVLTGEYSVIDNSEE 269 +SIE+Q A D ++ + ++ + V EE Sbjct: 241 MSIELQAAFEGDYTFKDASGNSTYVEETNEPLINPDIEVTQVHEE 285 >UniRef50_A5MYQ8 Phage-related rekombinase protein n=2 Tax=Clostridium kluyveri RepID=A5MYQ8_CLOK5 Length = 297 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 27/255 (10%) Query: 25 KNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQC 84 K +V + + +++++ L + A + L + S VS+ + Sbjct: 8 KPVEVKNILANVNVQKRFQEILGK--KAAGFMASLINV--SNGKLKGIEPYSVVSSAMIA 63 Query: 85 SQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVRE 144 + L L LG A+++P+ KK Q +GY+G + L R+GQ +++A + + Sbjct: 64 ATLDLPIDPNLGFAWIVPY--------KKKAQFQMGYKGFVQLGLRTGQYKNINAISIYK 115 Query: 145 GDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQ-IELVRSLSKA 203 G S+ L EK+ E V A L G ++ ++++ I + SKA Sbjct: 116 GQLKSWN-PLTEKIELNFENKESNEVIGYAAYFSLVSGFEKYVYWSKEEVITHAKRFSKA 174 Query: 204 GNNGPWVTHWEEMAKKTAIRR-LFKYLPVSIEIQRAVSMDEKEPL-----------TIDP 251 N+GPW T++ MA+KT ++ L K+ +SI++Q A+ D+ +D Sbjct: 175 FNDGPWQTNFNRMAEKTVLKNTLSKWGILSIDMQLALQADQAVIKKGVLDGEPVEVNLDY 234 Query: 252 AD-SSVLTGEYSVID 265 D + E+ +D Sbjct: 235 IDNPDSIDTEFEEVD 249 >UniRef50_Q9AZQ0 RecT n=2 Tax=root RepID=Q9AZQ0_9CAUD Length = 268 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 30/241 (12%) Query: 9 KADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPA 68 + KTQ + P +K++ L + E + + + Sbjct: 2 SNQITKTQQT--------------LKSPEVKKKFEEVLGK--KTEGFVASLLSVV-GNSN 44 Query: 69 LGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLA 128 L N D S ++A ++ + L L +LG AY++P+G + Q IGY+G I LA Sbjct: 45 LKNADANSVMTAAMKAATLDLPIEPSLGFAYVIPYG--------REAQFQIGYKGFIQLA 96 Query: 129 RRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEV 188 RSGQ+ L+ +V E S++ L E+L + +A +L +G + Sbjct: 97 LRSGQLTGLNCGIVYESQFVSYD-PLFEELELDFSQQASGDAVGYFASMKLANGFKKVTY 155 Query: 189 MTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIE---IQRAVSMDEK 244 +++Q+ + NGPW H++ MA+KT ++ + KY P SIE IQ A++ D+ Sbjct: 156 WSKEQVLAHKKKFVKSANGPWRDHFDAMAQKTVLKAMLTKYAPASIESKMIQTAITEDDS 215 Query: 245 E 245 E Sbjct: 216 E 216 >UniRef50_C4ZCC7 RecT family protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZCC7_EUBR3 Length = 302 Score = 193 bits (491), Expect = 4e-48, Method: Composition-based stats. Identities = 69/281 (24%), Positives = 112/281 (39%), Gaps = 37/281 (13%) Query: 9 KADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPA 68 + + QG + A + V S I+Q ++K++ L + A + + T + Sbjct: 4 QNAVATQQGTQLSVAAQ---VKSMISQDAVKKKFTEVLGQ--KAPQFLASITNVVAGSAQ 58 Query: 69 LGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKN------EKSGKKNVQLIIGYR 122 L C + +SA + L S LG A ++P+ N + Q + Y+ Sbjct: 59 LKKCPATTIMSAAFVAATYDLPIDSNLGFAAIVPYNNNKYNPQTRQWEKHPEAQFQMMYK 118 Query: 123 GMIDLARRSGQIASLSARVVREGDEFSF-------EFGLDEKLIHRPGENEDAPVTHVYA 175 G I LA RSG ++ VV + + S+ EF D + E + + YA Sbjct: 119 GFIQLAIRSGYYEKMNCSVVYKDELVSYNPITGEVEFVTDFSKCTQRAEGKSENIAGYYA 178 Query: 176 VARLKDGGTQFEVMTRKQIE-LVRSLSKA--------GNNGPWVTHWEEMAKKTAIRRLF 226 +L G + MT ++E R S A W T +E MA KT I+ L Sbjct: 179 WFKLLTGFRKELFMTTAEVENHARKYSTAYRYDLENNKKGSKWTTDFEAMALKTVIKMLL 238 Query: 227 -KYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDN 266 K+ +S+++QRA+ D+K GE S DN Sbjct: 239 SKWGILSVDMQRAIQDDQKVYD---------EDGEGSYGDN 270 >UniRef50_A9BYL3 RecT protein n=3 Tax=Burkholderiales RepID=A9BYL3_DELAS Length = 307 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 65/229 (28%), Positives = 101/229 (44%), Gaps = 21/229 (9%) Query: 45 ALPRHMTAER---MIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLL 101 + R + ER T + L D S V+A+ + +G+ A AYL+ Sbjct: 22 LVDRSINFEREAGFAIQVLTAGDYIAKLAANDRQSVVNAVTNIAAIGISLNPAKKQAYLV 81 Query: 102 PFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIH- 160 P K + L I Y G+IDLA ++G I A +V D F+ G D H Sbjct: 82 PRKGK--------ICLDISYMGLIDLAVQAGSILWAQADLVYASDAFTLN-GFDRPPTHS 132 Query: 161 -RPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLS---KAGNNGPWVTHWEEM 216 P E + Y V + G + M+R++I+ +++ S KAG + PW T + EM Sbjct: 133 YNPFSRERGELVGAYVVVKTPSGDYLTDCMSREEIDAIKNRSESVKAGKSSPWDTDYGEM 192 Query: 217 AKKTAIRRLFKYLPVSIEIQRAVSMDEKEPL----TIDPADSSVLTGEY 261 AKKT ++R +KY P S + +A+ E T PA S+ + + Sbjct: 193 AKKTVVKRAYKYWPKSDRLDQAIHHLNTEGGEGLATAQPARSAAIDPQP 241 >UniRef50_B6JI05 Rect protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JI05_OLICO Length = 461 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 70/234 (29%), Positives = 104/234 (44%), Gaps = 15/234 (6%) Query: 17 GNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMS 76 PA N V F + LP H+ ++++ +A T I++ P L C S Sbjct: 22 NVNVPAQKSNHPVAVFREYAMQRISTLQELP-HIDPQQLLSVALTAIQRKPDLMRCTPQS 80 Query: 77 FVSAIVQCSQLGLEPGSALGHAYLLPFG-NKNEKSGKKNVQLIIGYRGMIDLARRSGQIA 135 +A V +Q GL P G ++P+G N + K + + G+ R SGQI Sbjct: 81 LWNACVLAAQDGLLPDGREG--AIVPYGENADGKRVAEIATWMPMVEGLRKKVRNSGQIK 138 Query: 136 SLSARVVREGDEFSFEFGLDEKLIHRP-GENEDAP------VTHVYAVARLKDGGTQF-E 187 +V GD F + G D +L H P ++ P + Y++A DG E Sbjct: 139 DWYVELVYAGDFFRYRKGDDPRLEHEPVPPSQRTPNTPFHGIVAAYSIAVFTDGSKSAPE 198 Query: 188 VMTRKQIELVRSLSKAGNNGPWVT--HWEEMAKKTAIRRLFKYLPVSIEIQRAV 239 VM ++IE VR+ SKA N GPW + EM KK RR +K LP S + + + Sbjct: 199 VMWIEEIEKVRTKSKAKN-GPWQDSAFYPEMCKKVVARRHYKQLPHSAGMDKLI 251 >UniRef50_C3WER4 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C3WER4_FUSMR Length = 333 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 60/255 (23%), Positives = 110/255 (43%), Gaps = 22/255 (8%) Query: 28 DVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQL 87 + S + ++K+QL + L A + + P L D S ++A + + L Sbjct: 22 ALKSMLATQAIKKQLKSLLGER--AGHFMMAIIQVVEGTPQLQQADPQSIINAAIASAVL 79 Query: 88 GLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDE 147 L LG AY++P+ +KN+ + Q +GY+G I LA RSG+ ++A ++EG+ Sbjct: 80 NLPIEKNLGFAYIVPYNDKNKGT---LAQFQMGYKGYIQLALRSGEYKYINAIEIKEGEI 136 Query: 148 FSFEFGLDE---KLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELV------- 197 + E K I + +A + +G MT Q++ Sbjct: 137 QGYNILTGELNLKFIEDLDKRLEAKTVGYASYIEFNNGFRNTLFMTVGQVKNHAEKYSQS 196 Query: 198 --RSLSKAGNNGPWVTHWEEMAKKTAIR-RLFKYLPVSIEIQRAVSMDEKEPLTIDPADS 254 L K W +++ MA KT ++ L K+ +S+E+Q+A+ D + D Sbjct: 197 YQYDLRKGYTMSNWSKNFDAMALKTVLKLNLSKFGALSVEVQKALQTDGLVVKEV--EDD 254 Query: 255 SVLTGEYSVIDNSEE 269 + G+++ DN+ E Sbjct: 255 GTIIGQFA--DNTGE 267 >UniRef50_C3X3A2 RecT family protein n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X3A2_OXAFO Length = 290 Score = 186 bits (472), Expect = 6e-46, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 116/280 (41%), Gaps = 42/280 (15%) Query: 18 NRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSF 77 N A ++ + +F+N +++ L + + + + P L C + Sbjct: 7 NLAETKKQDVSLAAFVNN-----KVSNIL-NGTKRDAFVTSVVSAVTINPNLSVCSRGTI 60 Query: 78 VSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASL 137 VSA +Q + L L P LGH Y++P+ +K Q +GY+G I LA RSGQ + Sbjct: 61 VSAALQGAALDLSPSPVLGHFYIVPYKDK--------AQFQLGYKGYIQLAIRSGQYRRI 112 Query: 138 SARVVREGDEFSFEF---GLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQI 194 + +REG+ + + ++I + E PV YA+ L +G + ++K++ Sbjct: 113 NVLEIREGELLGWNPFAEKISVEIIEDDEKREKLPVVGYYAMFELVNGFEKSVYWSKKKM 172 Query: 195 ELVRS--------------------LSKAGN-NGPWVTHWEEMAKKTAIRRLF-KYLPVS 232 E S+ + W +++MA KT +R L K+ +S Sbjct: 173 EQHADRYSPAFSLESFKKIQEGKIPKSEMWKYSSFWYADFDQMAFKTLLRHLISKWGVMS 232 Query: 233 IEIQRAVSMDEK---EPLTIDPADSSVLTGEYSVIDNSEE 269 I++Q A+ D E D+ ++ + + E+ Sbjct: 233 IDMQSAIEKDMTIIDENGIPQYEDNDLIDLPDGSVSDVEK 272 >UniRef50_Q14MJ4 Putative rect protein n=1 Tax=Spiroplasma citri RepID=Q14MJ4_SPICI Length = 304 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 14/238 (5%) Query: 29 VISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLG 88 ++ F+ + E + + R L + + ++A Q L Sbjct: 4 IVEFLKTDKVNEWIKSKFSNENEIARFKSNIVAISNSNDLLQKANPRTIMTACYQGVLLN 63 Query: 89 LEPGSALGHAYLLPFGNKNEKSGKK--------NVQLIIGYRGMIDLARRSGQIASLSAR 140 L G+AY++P+ K + Q +GY+G I LA+RSGQ +S Sbjct: 64 LPMEKQFGYAYVVPYNTKITRIINGREIQEWVNQAQFQMGYKGYIQLAQRSGQYLDMSVS 123 Query: 141 VVREGDEFSFEF--GLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELV- 197 VR G+ +++ G + E E + A ++ +G + MT++Q+E Sbjct: 124 DVRVGELVNYDRLKGTSFNWVQNEDEREKLQIIGYVAYFKMVNGFEKTLYMTKEQMENHF 183 Query: 198 --RSLSKAGNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDEKEPLTIDPA 252 S + A N ++ ++EMA KT + L K+ +S+E+Q+A D+ T D Sbjct: 184 MKYSKTYAKNKSFYIATFDEMALKTVLTSLLRKWGIMSVELQQAYKSDQSVITTNDEN 241 >UniRef50_A9DEN8 DNA recomination protein n=1 Tax=Yersinia phage PY100 RepID=A9DEN8_9CAUD Length = 332 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 62/232 (26%), Positives = 98/232 (42%), Gaps = 17/232 (7%) Query: 37 SMKEQLAAALPRH-MTAERMIRIATTEIRKVP---ALGNCDTMSFVSAIVQCSQLGLEPG 92 S + Q A + + + A ++ + + S +AI + +G+ Sbjct: 34 SQQGQFEAVVTDDKINFVKEAGFALQILQGNNFTCGVAQRNPESLKNAITNVAAIGVSLN 93 Query: 93 SALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEF 152 A HAYL+P NV L I Y G+I++A SG I A++V D + Sbjct: 94 PAKKHAYLVPRNG--------NVCLDISYLGLINIAVESGSIKWAQAKIVYSNDTYE-NT 144 Query: 153 GLDEKLIHRP-GENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLS---KAGNNGP 208 G+D IH+ + Y + +D M+ +I +R S K GN+ P Sbjct: 145 GVDTAPIHKYNAFGNRGEIIGAYVTVKTRDDSYLTTEMSIDEIHRIRQRSESFKKGNSSP 204 Query: 209 WVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGE 260 W T +EEM KKT I+R +K PVS + A+ M ++ ID +GE Sbjct: 205 WKTDYEEMVKKTVIKRAYKLWPVSDRLANAIEMLNEQGEGIDFNSERKASGE 256 >UniRef50_Q6AC64 Phage recombination protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AC64_LEIXX Length = 261 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 65/240 (27%), Positives = 100/240 (41%), Gaps = 15/240 (6%) Query: 21 PAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSA 80 A KN + ++ + + + AL M A + + A T I++ P +G+ D S A Sbjct: 1 MAVKKNPTIEDYLIKY--EPEFQRALGASMDAAKFAQDALTAIKQNPKIGHSDPRSLFGA 58 Query: 81 IVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSAR 140 + +QL L G L +L G V I+GY G + L +G + +SA Sbjct: 59 LFLAAQLKLPVGGPLAQFHL----TTRTVKGNLTVVPIVGYGGYVQLIMNTGLYSRVSAF 114 Query: 141 VVREGDEF----SFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIEL 196 ++ GD F + E G E R +++ V V A A++K V + Sbjct: 115 LIHAGDYFVTGANSERG--EFYDFRRADSDRGEVKGVIAYAKVKGHNESSWVYIDAETMR 172 Query: 197 VRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIE---IQRAVSMDEKEPLTIDPAD 253 + K + PW EM KKT IR L KYLP S+E + A S D+ +D Sbjct: 173 AKHRPKYWESTPWADDAGEMFKKTGIRVLQKYLPKSVESLNVALAASADQAIVRKVDGVP 232 >UniRef50_A4XBY1 RecT protein n=1 Tax=Salinispora tropica CNB-440 RepID=A4XBY1_SALTO Length = 299 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 29/266 (10%) Query: 15 TQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPA------ 68 TQ A +++ I Q S E A LP H+ +R+A +++ Sbjct: 2 TQTVSQAVATRDNSPAGLITQYS--ESFAQVLPSHIKPATWVRLAQGALKRGKRGDGGRF 59 Query: 69 ----LGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGM 124 + + F++A++ ++ GLEPG+ YL P K G+ + I GY+G Sbjct: 60 ELEIAASNNPGVFLAALLDAARQGLEPGTE--QYYLTPRKVK----GRLEILGITGYQGH 113 Query: 125 IDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIH--RPGENE--DAPVTHVYAVARLK 180 I+L R+G +AS+ A +VRE DE+ ++ G+D+ +H +P + + VYA AR+K Sbjct: 114 IELMYRAGAVASVVAEIVREHDEYRYQRGIDDVPVHRYKPFARDAERGALIGVYAYARMK 173 Query: 181 DGGTQFEV-MTRKQIELVRSLSKAGNN--GPWVTHWEEMAKKTAIRRLFKYLPVSIEIQ- 236 DG V ++R I+ +++ S+ N+ PW H M K+A+R+L K++P S E + Sbjct: 174 DGAVSRVVELSRDDIDRIKASSQGANSEYSPWQKHEAAMWLKSAVRQLQKWVPTSAEFRR 233 Query: 237 ---RAVSMDEKEPLTIDPADSSVLTG 259 RA + + D D + Sbjct: 234 EQLRAAAEAHRVASAADAPDGATAPQ 259 >UniRef50_C3Q0Z8 RecT family protein n=2 Tax=Bacteroides RepID=C3Q0Z8_9BACE Length = 302 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 99/240 (41%), Gaps = 15/240 (6%) Query: 37 SMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTM---SFVSAIVQCSQLGLEPGS 93 S K+ AA R + A + P L +C V AI S GL Sbjct: 61 SPKKAFIAAGGTEQQFAREVNFAMQAMLNNPYLIDCARQYPDHLVEAIKNVSLTGLTLNP 120 Query: 94 ALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFG 153 L YL+P+ K V+ Y G +D+ R+G + + + +V DEFS G Sbjct: 121 ELRLGYLVPYKGK--------VKFQASYMGKVDILIRTGVVKDIYSDLVYANDEFSMTKG 172 Query: 154 LDEKLIHRPG-ENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLS---KAGNNGPW 209 +IH+P E + Y A L G +F+ M + +IE ++S S K G PW Sbjct: 173 TGGTIIHKPNVFGERGDLLGGYYFAVLTSGVVKFDAMPKARIEEIKSRSEAVKKGKQSPW 232 Query: 210 VTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDNSEE 269 T +EEMA+KT + FK+LP + + + E E D + D+ EE Sbjct: 233 DTDFEEMARKTIVNWAFKFLPKTGISDSMIKVLETESQLDDEMFEDWKKAQGQKPDDFEE 292 >UniRef50_C7Q4I7 RecT protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q4I7_CATAD Length = 313 Score = 179 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 69/244 (28%), Positives = 116/244 (47%), Gaps = 29/244 (11%) Query: 15 TQGNRAP--AAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPA---- 68 T+ A A +++ + S A LP H+ E +R+A ++K Sbjct: 5 TENTTASTAVATRDNSPGGMVK--SFSADFAMVLPSHIKPETWVRLAQGALKKGKKVKLD 62 Query: 69 ----------LGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLI 118 N + F+S+++ ++LGLEPG+ YL P K G+ + I Sbjct: 63 DGSTRTELEIAANNNPAVFLSSLLDAARLGLEPGTE--QYYLTPRSVK----GQLEILGI 116 Query: 119 IGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGEN--EDAPVTHVYAV 176 +GY+G I+L R+G I+S+ A V D F+++ G+ E+ +H + + + VYA Sbjct: 117 VGYQGYIELMYRAGAISSVVAECVYANDAFTYKPGVHERPLHDIDWDLADRGALRLVYAY 176 Query: 177 ARLKDGGT-QFEVMTRKQIELVRSLSKAGNN--GPWVTHWEEMAKKTAIRRLFKYLPVSI 233 A + DG T + V+ R I ++ S+ N+ PW TH M K+A+R+L K++P S Sbjct: 177 AVMGDGATSKVVVLNRAAILKIKDSSQGANSNYSPWKTHEPAMWLKSAVRQLAKWVPTSS 236 Query: 234 EIQR 237 E R Sbjct: 237 EYMR 240 >UniRef50_Q03VK6 Recombinational DNA repair protein (RecE pathway) n=1 Tax=Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 RepID=Q03VK6_LEUMM Length = 310 Score = 176 bits (446), Expect = 7e-43, Method: Composition-based stats. Identities = 60/267 (22%), Positives = 107/267 (40%), Gaps = 32/267 (11%) Query: 29 VISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLG 88 V IN M++ L A + +T + P L + +A ++ + L Sbjct: 8 VQKIINSDKMQKHFEEILQD--NAAGFLSGLSTVVALNPDLAKTNMNDLTNAAMRAAILD 65 Query: 89 LEPGSALGHAYLLPFGNKNEKSGK-----KNVQLIIGYRGMIDLARRSGQIASLSARVVR 143 L LG AY++P+G + + GK Q +GYRG+I L + +G++ L VV Sbjct: 66 LSVLPDLGEAYVIPYGKRAKVDGKWVTKDVKAQFQLGYRGIIKLVQNTGRVGRLGGSVVY 125 Query: 144 EGDEFSFEFGLDEKLI----HRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQ-IELVR 198 E ++ + + DE + + P + ++PV A L DG + ++ I Sbjct: 126 EANKPHYNYVFDEFTMENENYDPYVDGESPVAGYLAFYYL-DGERIVKYWPIQRVINHAT 184 Query: 199 SLSKAGN------------NGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEP 246 S+ PW T ++ MA KT ++ L K+ P + ++ +A++ D+K Sbjct: 185 KFSQTYKGPDHKDRYGKTPQTPWYTDFDAMAIKTVMKDLLKFAPKTTKVAQAIAEDDKNE 244 Query: 247 LTIDPADSSVL-------TGEYSVIDN 266 E +IDN Sbjct: 245 REARDVTPETEEITPEEQNVEPEIIDN 271 >UniRef50_C9PZW7 RecT family protein n=3 Tax=Bacteroidales RepID=C9PZW7_9BACT Length = 307 Score = 176 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 64/269 (23%), Positives = 108/269 (40%), Gaps = 32/269 (11%) Query: 29 VISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLG 88 + S ++ PS+++Q AL H A + L CD + V ++ + L Sbjct: 15 LKSIVSAPSVQDQFKNALGEHKDA--FVASLIDLYTGDKQLQTCDAKAIVMEALRAATLR 72 Query: 89 LEPGSALGHAYLLPFGN--KNEKSGKKNV---QLIIGYRGMIDLARRSGQIASLSARVVR 143 L ALG AY++ F N KN V + GY+G I LA R+GQ +++A V Sbjct: 73 LPLNRALGFAYIIVFNNNVKNPDGSWSKVPTPTFVPGYKGYIQLAMRTGQYKTINADFVY 132 Query: 144 EGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELV---RSL 200 EG+ + E GE + + + L +G ++ + +++ S Sbjct: 133 EGELRKVDKLKGEVAF--DGEKKSDKIVGYFCYFELLNGFSKTLYVPIEEMAAYALRYSP 190 Query: 201 SKAGNNGP-------------------WVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVS 240 S G N P W ++ +M KT IRRL KY +S+E+Q A+ Sbjct: 191 SFKGKNKPTVEALIAAAQSGAVSSQVGWSGNFNDMGLKTVIRRLLSKYGYLSVEMQTAMD 250 Query: 241 MDEKEPLTIDPADSSVLTGEYSVIDNSEE 269 D ++ + ++I + E Sbjct: 251 KDVEDAGNSRDETIAEHANNKTIIAEAVE 279 >UniRef50_A1U8M4 RecT protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U8M4_MARAV Length = 319 Score = 172 bits (437), Expect = 8e-42, Method: Composition-based stats. Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 14/221 (6%) Query: 36 PSMKEQLAAALPRHMTAERMIRIATTEIRKVPAL---GNCDTMSFVSAIVQCSQLGLEPG 92 S KE+ + + ++ AT ++ L + S A+ + +GL Sbjct: 18 ESSKEKFS---GSGLDFKQEQIFATQQLMNNSYLLDVAKNNPSSLRLAMYNVAAVGLTLN 74 Query: 93 SALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEF 152 G AYL+P + + K V L I YRG+I + +G I A +V E DEF+++ Sbjct: 75 PNQGLAYLVPRRLRRNEDAK--VMLDISYRGLIAIGVETGAIRWAKAELVYENDEFTYK- 131 Query: 153 GLDEKLIHR--PGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNN--GP 208 G +K H+ P + + Y +A L GG E M++ ++ +R +S+A GP Sbjct: 132 GPADKPDHKCDPFSTDRGAIRGGYCLAELPSGGVLVEAMSKADMDKIRDVSEAFKKGFGP 191 Query: 209 WVTHWEEMAKKTAIRRLFKYLPVSI-EIQRAVSMDEKEPLT 248 WV E+M K+ ++R K+ P+S + RA+ + +E Sbjct: 192 WVDWAEQMMLKSIVKRASKWWPMSTPRMARALQILNEENGE 232 >UniRef50_C0Q2I7 Rac prophage; recombination and repair protein n=4 Tax=Salmonella enterica RepID=C0Q2I7_SALPC Length = 148 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 111/133 (83%), Positives = 120/133 (90%) Query: 47 PRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNK 106 + + + +ATTEIRKVPALG+CDTMSFVSAIVQCSQLGLEPG ALGHAYLL FGN+ Sbjct: 6 GAALQVDGVPAVATTEIRKVPALGDCDTMSFVSAIVQCSQLGLEPGGALGHAYLLAFGNR 65 Query: 107 NEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENE 166 NEKS KKNVQLIIGYRGMIDLARRSGQIASLSARVVRE D+FSFEFGL+EKL+HRPGENE Sbjct: 66 NEKSSKKNVQLIIGYRGMIDLARRSGQIASLSARVVREDDDFSFEFGLEEKLVHRPGENE 125 Query: 167 DAPVTHVYAVARL 179 DA VTHVYAVARL Sbjct: 126 DAQVTHVYAVARL 138 >UniRef50_A5N589 Phage-related protein n=16 Tax=Clostridium RepID=A5N589_CLOK5 Length = 268 Score = 162 bits (410), Expect = 1e-38, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 110/239 (46%), Gaps = 23/239 (9%) Query: 43 AAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLP 102 ALP+ R ++ T ++ + C +S +++ + LGL+ + Y +P Sbjct: 24 KEALPKDFNKSRFLQNCMTVLQDTKDIDKCQPISVARTMLKGAFLGLDFFNR--ECYAIP 81 Query: 103 FGNKNEKSGKKNVQLIIGYRGMIDLARRS--GQIASLSARVVREGDEFSFEFGLDEKLI- 159 + N+Q Y+G I LA++ I + A+VVR+GDEF + + Sbjct: 82 YNG--------NLQFQTDYKGEIKLAKKYSINPIKDIYAKVVRKGDEFQESIVNGHQTVN 133 Query: 160 HRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVR-SLSKAGNNGPWVTHWEEMAK 218 +P + + +AV +DG +E MT+++IE +R + SKA N+ WV EM K Sbjct: 134 FKPLPFNNDEIIGAFAVCLFQDGSMIYETMTKQEIEDIRNNFSKAKNSPAWVKTPGEMYK 193 Query: 219 KTAIRRLFKYLPV---SIEIQRAVSM------DEKEPLTIDPADSSVLTGEYSVIDNSE 268 KT +RRL K++ + SIE ++ + + + D + + +V ++E Sbjct: 194 KTVLRRLCKFIELDFNSIESKKTYDEASDFQFEHEPNKEVSNFDKGSIDEDKTVEADTE 252 >UniRef50_B2GBH1 Hypothetical phage protein n=1 Tax=Lactobacillus fermentum IFO 3956 RepID=B2GBH1_LACF3 Length = 342 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 20/200 (10%) Query: 45 ALPRHMTAERMIRIATTEIRKV------PALGNCDTMSFVSAIVQCSQLGLEPGSALGHA 98 ALP H A+ ++ A ++ V PAL C S +A++ + GL P A Sbjct: 38 ALPAHYNAQNALKAAYLRLQTVKDRQGRPALTVCTEPSIANALLDMAIQGLSP--AKNQC 95 Query: 99 YLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKL 158 Y + +GN +Q+ Y G I +R I + A+V+ +GDEF + Sbjct: 96 YFIVYGN--------ELQMQRSYFGTIAALKRLDSIEDIDAQVIHQGDEFEIGADETGHI 147 Query: 159 I---HRPGE-NEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWE 214 I +P N D P+ +A +L +G T + VMT+ QI++ S S+ N + Sbjct: 148 IVTKFKPSFANLDKPIKGAFAFIKLTNGRTAYTVMTKAQIDVSWSQSRNRQNKVQDKFSD 207 Query: 215 EMAKKTAIRRLFKYLPVSIE 234 EMAK+T I R K + + Sbjct: 208 EMAKRTVINRAAKIFINTSD 227 >UniRef50_C8U7M5 Predicted DNA recombination protein Bet n=14 Tax=Enterobacteriaceae RepID=C8U7M5_ECO10 Length = 316 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 62/250 (24%), Positives = 109/250 (43%), Gaps = 19/250 (7%) Query: 29 VISFINQPSMKEQL--AAALPRHMTAERMIRIATTEIRKVPALGN---CDTMSFVSAIVQ 83 + + +E+ A +T + + A + +K L + + S +AI+ Sbjct: 1 MFDIVEFVKQQERFFCEALTEPTLTWAKESQFAIQQFQKNAFLADTARANLPSAQNAIIN 60 Query: 84 CSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVR 143 + +G+ A AYL+P KK V L I Y G++ LA+ +G I ++V Sbjct: 61 VAAIGITLNPASKLAYLVPR--------KKAVCLDISYMGLLHLAQVTGAIQWGQCKLVY 112 Query: 144 EGDEFSFEFGLDEKLIHRPGEN-EDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSK 202 E D + G+D H+ + Y V + +G E M+ ++IE++R+ SK Sbjct: 113 EKDIYESN-GIDCAPTHKYNPFVDRGARIGGYCVVKTSEGDYLTEEMSNREIEVIRACSK 171 Query: 203 AGNNG---PWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTG 259 AGNNG PW + +EMA+K ++R KY P + A+ + ++ + Sbjct: 172 AGNNGGSSPWDSFPDEMARKAIVKRASKYWPRRDRLDTAIDYLNTQGGEGIILNADHI-P 230 Query: 260 EYSVIDNSEE 269 E V S+E Sbjct: 231 ERDVTPASDE 240 >UniRef50_C2FKJ7 Recombination protein RecT n=2 Tax=Lactobacillus plantarum RepID=C2FKJ7_LACPL Length = 299 Score = 159 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 104/257 (40%), Gaps = 26/257 (10%) Query: 26 NSDVISFINQ--PSMKEQLAAALPRHMTAERMIRIATTEIRKV----PALGNCDTMSFVS 79 ++++++ +N MK +LP + + A + P L CD S + Sbjct: 2 SNELVTMVNNNIEDMKNNEGLSLPPDYSVGNALNSAYLILSDTSKGQPLLDKCDQGSVIK 61 Query: 80 AIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSA 139 A++ + GL P A Y +P+GN + + Y G I + +R + + A Sbjct: 62 ALMNMAIQGLSP--AKNQCYFIPYGN--------QLVMQRSYFGSISVVKRLSNVKDIQA 111 Query: 140 RVVREGDEFSF--EFGLDEKLIHRP-GENEDAPVTHVYAVARLKDGGTQFEVMTRKQIEL 196 +VV + D F E G+ P EN D P+ +A +G + VMT+K I+ Sbjct: 112 QVVHKDDTFKIGGENGVLVVKEFEPSFENLDKPIIGAFAWVEDLNGNRTYTVMTKKDIDT 171 Query: 197 VRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIE----IQRAVSMDEKEPLTIDPA 252 S +K EEMAK+T I R K+ S +AV+ D + Sbjct: 172 SWSHAKTKK--VQNEFPEEMAKRTVINRAAKFYINSSSDNDLFVQAVN-DTTSSEYENDD 228 Query: 253 DSSVLTGEYSVIDNSEE 269 V + S++ + EE Sbjct: 229 PKDVTPTKRSLVADVEE 245 >UniRef50_Q14KA3 Putative rect protein n=3 Tax=Spiroplasma citri RepID=Q14KA3_SPICI Length = 284 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 18/240 (7%) Query: 26 NSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPAL---GNCDTMSFVSAIV 82 N+ + +N + + L + T P L + MS +SA V Sbjct: 2 NNKIELILNNSKVNNWINEKLTNQKEINLFRKNILTIYNNNPNLFDKEKINLMSVLSACV 61 Query: 83 QCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVV 142 + L L LG+AY++P+ K QL IGY+G I LA R+G+ +++A V Sbjct: 62 KAMLLDLPLDPNLGYAYIVPYNGKG--------QLQIGYKGYIQLAIRTGKYLTINAIEV 113 Query: 143 REGDEFSF---EFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIE-LVR 198 ++G+ +F E + K I E A +L +G + ++++ E + Sbjct: 114 KQGELLNFDELEQEYNFKWITNENERTKKETIGYVAFFKLLNGYKKTLYWSKEKCENHFK 173 Query: 199 SLSKAGNNGPWVT--HWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDEKEPLTIDPADSS 255 + SK T +E MA KT + +L K+ +S+E+Q A D+ + S Sbjct: 174 TYSKNYQTYGKFTAGSYEGMALKTVLTQLLRKWGIMSVEMQEAYQHDQAIIINNSKEFSD 233 >UniRef50_B1XAU6 RecT protein n=3 Tax=Enterobacteriaceae RepID=B1XAU6_ECODH Length = 305 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 59/244 (24%), Positives = 94/244 (38%), Gaps = 27/244 (11%) Query: 42 LAAALPRHMTAERMIRIATTEIRKVPALGNC---DTMSFVSAIVQCSQLGLEPGSALGHA 98 + AA M + + A + L + S +AI+ + +G+ A A Sbjct: 17 IKAATDERMVWAKESQFAIQLFQNNDYLAKVAFQNQTSTQNAIINVAAIGISLNPAQKLA 76 Query: 99 YLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKL 158 YL+P K + L I Y G++ +A++SG I + +VR D+F E GLD+ Sbjct: 77 YLVPR--------KGAICLDISYMGLMHIAQQSGAIKWCQSAIVRRNDQFRRE-GLDKPP 127 Query: 159 IHR----PGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNN-------- 206 IH E + + Y + DG M I +R S+A Sbjct: 128 IHIYNDFDTEEQRGDIVGAYVTVKTDDGDYLTHTMRIDAIYSIRDRSEAWKKYKSDNSKK 187 Query: 207 GPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEP-LTIDPADSSVLTGEYSVID 265 PWVT E+M KT +++ KY P + A+ E I+ + E V Sbjct: 188 CPWVTDEEQMILKTVVKQAAKYWPRRERLDAAIDHVNTEGEEGINFSAER--QPERDVTP 245 Query: 266 NSEE 269 +E Sbjct: 246 AGDE 249 >UniRef50_B4AH83 RecT protein n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AH83_BACPU Length = 306 Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 39/253 (15%) Query: 45 ALPRHMTAERMIRIATTEIRKV------PALGNCDTMSFVSAIVQCSQLGLEPGSALGHA 98 LP + A ++ A ++++V PAL C S ++++ GL P A Sbjct: 30 VLPSNYNASNALKSAFFKLQEVKDKSGRPALEVCTRESIANSLLDMVVQGLSP--AKTQC 87 Query: 99 YLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEF--GLDE 156 Y + +GNK +Q+ Y G + +R + + + V+ EGD F +E G ++ Sbjct: 88 YFIVYGNK--------LQMNRSYFGTQAVLKRLTNVKDIWSNVIYEGDVFEYEIDGGQEK 139 Query: 157 KLIHRPG-ENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEE 215 + H EN D + YAV + D MT+K+IE S SK + +E Sbjct: 140 LIKHETKLENRDKDIIGAYAVVKTIDDIELLTPMTKKEIETAWSQSKT-SGAVQKKFPQE 198 Query: 216 MAKKTAIRRLFK-YLPVSIEIQRAVSM------------------DEKEPLTIDPADSSV 256 MA++T I R K Y+ S + V DE + + A+S + Sbjct: 199 MAQRTVINRAAKRYINTSDDSDLLVQAINNSTENEYDNERVDVTPDEVKKEISENANSEI 258 Query: 257 LTGEYSVIDNSEE 269 + ++ + E Sbjct: 259 IDVGFNEPEEDSE 271 >UniRef50_Q3C0K4 RecT protein n=2 Tax=root RepID=Q3C0K4_SODGL Length = 557 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 7/161 (4%) Query: 80 AIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKN--VQLIIGYRGMIDLARRSGQIASL 137 A+ +C+ GL P A L+ KN +G+ V + G++ AR+SGQ+A++ Sbjct: 2 ALKKCATDGLMPDGR--EAALVIRQTKNSSTGQYEDRVVYMPMVDGVLKRARQSGQVANI 59 Query: 138 SARVVREGDEFSFEFG-LDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIEL 196 ++ V D+F + DE L HRP + + VYA A+L G EVM R +++ Sbjct: 60 VSKAVYTADQFDYWVDERDEHLKHRPAFEDRGELRLVYAFAKLTSGELVVEVMGRAEVDK 119 Query: 197 VRSL--SKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEI 235 VR+ S + PW ++ MA KT + RL + LP + E+ Sbjct: 120 VRATVTSAGKSGSPWAKWYDRMALKTVLHRLARRLPCASEM 160 >UniRef50_Q708Q2 Putative uncharacterized protein n=2 Tax=root RepID=Q708Q2_9CAUD Length = 323 Score = 150 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 97/251 (38%), Gaps = 22/251 (8%) Query: 18 NRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPA---LGNCDT 74 N S V + I M+ + + ++ + + A ++ + L C Sbjct: 3 NELTQKQITSPVAARIG--EMQNE-GLMIAQNYSVSNALSSAYYALKNSSSGNLLQMCTQ 59 Query: 75 MSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQI 134 S +A++ GL P A Y +P+GN V+L Y G + + ++ ++ Sbjct: 60 DSIYNALLDMVTQGLSP--AKTQCYFIPYGN--------TVKLTRSYFGTMKVVKQLPEV 109 Query: 135 ASLSARVVREGDEFSF--EFGLDEKLIHRPGE-NEDAPVTHVYAVARLKDGGTQFEVMTR 191 + A V+ EGD+F E G + H N D P+ Y + +DG VMT+ Sbjct: 110 KDIYAEVIYEGDKFQIKNENGRKVFVSHETDWVNADNPIAGAYCIIEKEDGEKILTVMTK 169 Query: 192 KQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFK-YLPVSIEIQRAVSMDEKEPLTID 250 K+I+ + +K N +EMAK+T I R K + S + + + Sbjct: 170 KEIDKSWAQAKTKN--VQNNFPQEMAKRTVINRAAKQFFNTSDDNDLFIDAVNRTTENEY 227 Query: 251 PADSSVLTGEY 261 + V E Sbjct: 228 DNERQVKEAEP 238 >UniRef50_C8PFI2 Phage recombination protein Bet n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PFI2_9PROT Length = 328 Score = 150 bits (378), Expect = 6e-35, Method: Composition-based stats. Identities = 56/222 (25%), Positives = 90/222 (40%), Gaps = 25/222 (11%) Query: 42 LAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLL 101 + + T + PAL C S + A ++ +LGL P G AY++ Sbjct: 22 IKTITGGDKAKMSAFAASLTAMASDPALSICSVQSVIGAGLEIVRLGLNPNKTFGQAYVV 81 Query: 102 PFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEF-GLDEKLIH 160 PF NK QL IGY+G + LA R+G I A + DEF F G+ + + Sbjct: 82 PFKNK--------AQLQIGYKGWLSLAYRNGWI--FRALAAYKCDEFEINFAGIKDDIEF 131 Query: 161 RPGENEDAP---------VTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGP--- 208 P +E + V + G E + K++E +R S+ + Sbjct: 132 SPNYDERDETNSLWVFNNLRGVIVYVKDAGGNEFSEFVPFKKLEQLRLKSQNQKDKEALT 191 Query: 209 --WVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLT 248 W EEM K AI+ + LP++ +IQ A++ + + Sbjct: 192 NIWGEWAEEMYKAKAIKYVATRLPITEQIQEAINAENEAYKE 233 >UniRef50_D0AR03 RecT protein n=2 Tax=Enterococcus faecium RepID=D0AR03_ENTFC Length = 340 Score = 149 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 69/270 (25%), Positives = 105/270 (38%), Gaps = 31/270 (11%) Query: 17 GNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKV------PALG 70 + ++ D N ++EQ +P + + ++ A E+ Sbjct: 3 NDLTQTTQRSLDEQVISNLGRLQEQ-GLEMPPGYSPQNALKSAFFELTNNTGGNLLQMAA 61 Query: 71 NCDTM--SFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLA 128 N M S +A++ GL P A Y + +GNK VQL+ Y G + + Sbjct: 62 NNQEMKTSISNALLDMVIQGLSP--AKKQCYFIKYGNK--------VQLMRSYFGTMAVL 111 Query: 129 RRSGQIASLSARVVREGDEFSFEFGLDEKLIHR---PGENEDAPVTHVYAVARLKDGGTQ 185 R A ++ VVR+GDEF ++ + EN D + Y V +L +G Sbjct: 112 DRVTGGADITPVVVRQGDEFEVAMDGPNMVVKKHETKFENLDNEIIAAYVVIKLTNGKET 171 Query: 186 FEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIE-----IQRAVS 240 VMT+KQI+ + SK +GP EEMAK+T I R K L + +Q A Sbjct: 172 TTVMTKKQIDQSWAKSKMKGSGPQKEFPEEMAKRTVINRAAKALINTSNDNDLLVQAAKD 231 Query: 241 MDEKE----PLTIDPADSSVLTGEYSVIDN 266 E E + P V T E N Sbjct: 232 TLENEFDNNRKDVTPQTEKVATLEQKFFSN 261 >UniRef50_B1QU69 RecT family protein n=2 Tax=Clostridium butyricum RepID=B1QU69_CLOBU Length = 295 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 62/258 (24%), Positives = 99/258 (38%), Gaps = 23/258 (8%) Query: 16 QGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIR------KVPAL 69 + + KN +++ +P + + ++ A + K P L Sbjct: 2 ENKQVSVQEKNVTDKVLSRIKALEGTGDITMPANYSYSNALKSAYLILSETVDRDKKPVL 61 Query: 70 GNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLAR 129 +C S ++ ++ + GL P A Y + FG K +QL+ Y G I + Sbjct: 62 QSCSQTSIINTLLDMTIQGLSP--AKKQCYFIAFGGK--------LQLMKSYLGNIAATK 111 Query: 130 RSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENED------APVTHVYAVARLKDGG 183 R + ++ A V+ E DEFS+E L+ L N+D + YAV ++DG Sbjct: 112 RLKGVKNVFANVIYEKDEFSYELDLETGLKKITKHNQDFENIDINKIKGAYAVIVMEDGL 171 Query: 184 TQFEVMTRKQIELVRSLSKA-GNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMD 242 EVM QI S A G +G +EMAKKT I R K + + + Sbjct: 172 NYVEVMNINQIRNSWSQGAAKGQSGAHKNFTDEMAKKTVINRACKNFVCTSDDSDLLIES 231 Query: 243 EKEPLTIDPADSSVLTGE 260 +P D T E Sbjct: 232 MNRTNEYNPEDIVESTHE 249 >UniRef50_A8Z301 Possible recombination protein RecT n=32 Tax=root RepID=A8Z301_STAAT Length = 306 Score = 147 bits (371), Expect = 3e-34, Method: Composition-based stats. Identities = 63/285 (22%), Positives = 103/285 (36%), Gaps = 41/285 (14%) Query: 13 QKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNC 72 + + KN ++ Q LP + ++ A +I + L +C Sbjct: 6 KLQTIEQQLVQEKNVSDNVLNKVRVLESQGNLELPNDYSPSNAMKQAWLQISQDNKLMSC 65 Query: 73 DTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSG 132 + S +A++ GL P A Y +P+GNK +QL Y G + + +R Sbjct: 66 NDTSKANALLDMVTQGLNP--AKNQCYFIPYGNK--------MQLQRSYHGNVMMLKRDA 115 Query: 133 QIASLSARVVREGDEFSFEFGLDEKL-----IHRPGENEDAPVTHVYAVARLKDGGTQF- 186 + A+V+ +GD F E G ++ + + Y DG + Sbjct: 116 GAQDVVAQVIYKGDTFKQEMGETGRIKAIKHEQDFFNIDKENIIGAYCTIVFNDGRDNYI 175 Query: 187 EVMTRKQIELVRSLSKA-------GNNGPWVTHWEEMAKKTAIRR-------------LF 226 EVMT +QI+ S N+ EEMAKKT I R LF Sbjct: 176 EVMTIEQIKQAWMQSSMIKDEKALQNSKTHNNFKEEMAKKTVINRAAKRYINTSTDSNLF 235 Query: 227 KYLPVSIEIQRAVSMD-----EKEPLTIDPADSSVLTGEYSVIDN 266 KY S + QR +D +D + +Y+ ++N Sbjct: 236 KYAQESEQRQRKEVLDAEVEENANQEQLDFEQPVLEEAQYTELEN 280 >UniRef50_A5VKM2 RecT protein n=8 Tax=Lactobacillus reuteri RepID=A5VKM2_LACRD Length = 329 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 52/227 (22%), Positives = 85/227 (37%), Gaps = 29/227 (12%) Query: 46 LPRHMTAERMIRIATTEIR------KVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAY 99 LP + + + A ++ K P L C S + +++ GL P A Y Sbjct: 53 LPANYSVPNALTQALLRLQAVKTKGKTPVLQACTPNSIIQSLMDMVVQGLSP--AKDQCY 110 Query: 100 LLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFG------ 153 + +GN +QL Y G R I + A+ + EGD+ + Sbjct: 111 FIAYGN--------ELQLRRSYFGTTAALLRLENITDVDAQAIYEGDQVNTSIDRHGHLV 162 Query: 154 LDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHW 213 LD + H N+D + YA+ DG +MT+KQI++ + SK + Sbjct: 163 LDTENTHLDWTNQDNELIGAYAIITTADGVDHLTIMTKKQIKVSWNQSKTHD--VQNKFG 220 Query: 214 EEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGE 260 EMAK+T + R K + + D I+ S+ E Sbjct: 221 SEMAKRTVLNRAAKMFINTSD-----DSDHLLTGAINDTTSNEYDDE 262 >UniRef50_C7WI33 Prophage Lp1 protein 18 n=11 Tax=Enterococcus RepID=C7WI33_ENTFA Length = 338 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 66/259 (25%), Positives = 100/259 (38%), Gaps = 29/259 (11%) Query: 17 GNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVP-----ALGN 71 + ++ D N ++EQ +P + + ++ A E+ L Sbjct: 3 NDLTQVTQRSLDEQVIGNLNRLQEQ-GLEMPPGYSPQNALKSAFFELTNNSGGNLLQLAA 61 Query: 72 CDTM---SFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLA 128 + S +A++ GL P A Y + +GNK VQL+ Y G + + Sbjct: 62 NNPETKTSISNALLDMVIQGLSP--AKKQCYFIKYGNK--------VQLMRSYFGTMAVL 111 Query: 129 RRSGQIASLSARVVREGDEFSFEFGLDEKLI--HRP-GENEDAPVTHVYAVARLKDGGTQ 185 R A ++ VVREGD F + ++ H EN D + Y V +L +G Sbjct: 112 DRVTGGAEITPVVVREGDVFEIAMDGPDLVVAKHETSFENLDNDIKAAYVVIKLANGKEV 171 Query: 186 FEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIE-----IQRAVS 240 VMT+KQI+ +S SKA EEMAK+T I R KYL + +Q A Sbjct: 172 TTVMTKKQID--KSWSKAKTKNVQNDFPEEMAKRTVINRAAKYLINTSNDNDLFVQAAKD 229 Query: 241 MDEKEPLTIDPADSSVLTG 259 E E D Sbjct: 230 TLENEFERKDVTPEREEQA 248 >UniRef50_A0M496 RecT family protein n=1 Tax=Gramella forsetii KT0803 RepID=A0M496_GRAFK Length = 313 Score = 143 bits (361), Expect = 6e-33, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 94/257 (36%), Gaps = 26/257 (10%) Query: 15 TQGNRAPAAVKNSDV--ISFINQPSMKEQLAAALPRHMTAERMIRIA------TTEIRKV 66 ++ ++ K D+ ++ +P++ + E ++ A T + K Sbjct: 3 SETSKQLVKQKKQDISTRVLAKVNEFEQTGELRIPKNYSVENSLKSAYLILSETKDKNKK 62 Query: 67 PALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMID 126 P L +C S A+++ GL P Y +P+G K ++ I Y G I Sbjct: 63 PVLESCSVTSLSEALLKMVVWGLNPM--KKQCYFVPYGGK--------IECIPDYTGKIA 112 Query: 127 LARRSGQIASLSARVVREGDEFSFEF----GLDEKLIHRPGEN--EDAPVTHVYAVARLK 180 +A+R + + A V + D F FE G + H YA+ + Sbjct: 113 MAKRYAGLKDIKAHAVFKDDTFEFEVDPSTGRKKVTKHTQTLESMGSNEFKGAYAIMEMN 172 Query: 181 DGGTQFEVMTRKQIELVRSLSKAGNNGP-WVTHWEEMAKKTAIRRLFKYLPVSIEIQRAV 239 DG E+M++ QI A P + MA+K+ I R L S + + Sbjct: 173 DGTFDVEIMSKPQIVAAWQQGHANGTSPAHKKFPDRMARKSVINRACDALIRSSD-DSVL 231 Query: 240 SMDEKEPLTIDPADSSV 256 DE E ID + Sbjct: 232 YEDEDERKIIDVPSEDL 248 >UniRef50_C0WT85 Putative uncharacterized protein n=1 Tax=Lactobacillus buchneri ATCC 11577 RepID=C0WT85_LACBU Length = 333 Score = 143 bits (360), Expect = 7e-33, Method: Composition-based stats. Identities = 60/219 (27%), Positives = 90/219 (41%), Gaps = 21/219 (9%) Query: 45 ALPRHMTAERMIRIA---TTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLL 101 A P++ ++ A T L S +A+V GL P A Y + Sbjct: 29 ATPKNYNPANALKSAFFALTNANGGNLLEKGSKDSIANALVDMVVQGLTP--AKDQVYFI 86 Query: 102 PFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLI-- 159 P+G K V L Y G +R + + A VV + DEF ++ Sbjct: 87 PYG--------KQVTLQRSYFGTQAALKRLNSVQDIWAEVVHKDDEFEISAEDGRLIVSK 138 Query: 160 HRP-GENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAK 218 +P EN D P+ +AV + DG + VMT+KQI+ S S+A N+ EEMAK Sbjct: 139 FKPSFENLDKPIVGTFAVVQKVDGEKIYTVMTKKQIDT--SWSQARNHNVQQKFPEEMAK 196 Query: 219 KTAIRRLFK-YLPVSIEIQRAVSMDEKEPLTIDPADSSV 256 +T I R K +L S + + +D T + D+ Sbjct: 197 RTVINRAAKNFLNTSDDSD--LLVDSINRTTSNEYDNRK 233 >UniRef50_B7XGP3 DNA recombination protein n=2 Tax=Pseudomonas RepID=B7XGP3_PSEPU Length = 373 Score = 142 bits (359), Expect = 9e-33, Method: Composition-based stats. Identities = 57/228 (25%), Positives = 85/228 (37%), Gaps = 31/228 (13%) Query: 16 QGNRAPAAVKNSDVISFINQPS----MKEQLAAALPRHMTAERMIRIATTEIRKVPALGN 71 Q A A + I + K +L A M + + + ATT Sbjct: 16 QNAVAIIAKQEEKFIKLVESSKTDVMFKNELLFASQAMMNNDYLCKCATT---------- 65 Query: 72 CDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRS 131 + +S +A Q + GL + AYL+P V L + +RGM+ +A Sbjct: 66 -NPLSLRNAFSQVAAYGLTLNQSRQLAYLVPRDG--------QVVLDVSWRGMVKVAVND 116 Query: 132 GQIASLSARVVREGDEFSFEFGLDEKLIH--RPGEN--EDAPVTHVYAVARLKDGGTQFE 187 G I +V D+F + G + H P + + Y A L DG E Sbjct: 117 GAIRDCIVELVYSKDKFEY-RGKRQSPTHTFNPFDKKADRGEFVGCYVEALLPDGRVHVE 175 Query: 188 VMTRKQIELVRSLS---KAGNNGPWVTHWEEMAKKTAIRRLFKYLPVS 232 +T +I R S K GPWV + M KK+AI+ KY P + Sbjct: 176 AVTADEINAARDASELWKRKKKGPWVDFEDSMRKKSAIKIARKYWPQT 223 >UniRef50_C7THK4 RecT family protein n=4 Tax=Lactobacillales RepID=C7THK4_LACRL Length = 291 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 94/244 (38%), Gaps = 29/244 (11%) Query: 36 PSMKEQLAAALPRHMTAERMIRIATTEIRKVPA----LGNCDTMSFVSAIVQCSQLGLEP 91 M++ LP + + + A + L S A++ GL P Sbjct: 14 TEMQKNEGLKLPANYSPSNALNSAWLTLSDNSKGPSLLDKTSPQSQAKALLNMVIQGLSP 73 Query: 92 GSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSF- 150 A Y +P+G K++ L+ Y G + + +R + + A VVREGD+F Sbjct: 74 --AKNQVYFIPYG--------KDLTLMRSYFGSLAILKRLDNVQDVWAEVVREGDKFQIG 123 Query: 151 -EFGLDEKLIHRPG-ENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGP 208 + G + P EN+D + +AV +G F +MT+KQI+ S +K Sbjct: 124 SDRGRTVVKVFEPRIENQDNAIAAAFAVIVDNNGVENFTIMTKKQIDQSWSHAKTKK--V 181 Query: 209 WVTHWEEMAKKTAIRRLFKYLPVS----------IEIQRAVSMDEKEPLTIDPADSSVLT 258 EEMAK+T + R K+ S + A D EP + P ++ Sbjct: 182 QQEFPEEMAKRTVLNRAAKFFINSSSDNDLLLGAVNDTTADEYDNAEPKDVTPNFDDLID 241 Query: 259 GEYS 262 + Sbjct: 242 SKPK 245 >UniRef50_C6CX43 RecT protein n=2 Tax=Paenibacillus RepID=C6CX43_PAESJ Length = 299 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 95/248 (38%), Gaps = 34/248 (13%) Query: 15 TQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDT 74 T N+A A+ ++ NQ + E L A + + T E+ T Sbjct: 2 TNNNKAVQAIDTQALVGNFNQTEL-ETLKATIAKGTTNEQFALFVQT------------- 47 Query: 75 MSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQI 134 C++ GL P L Y + + K+ + + I G++ LA+R Q Sbjct: 48 ---------CARSGLNPF--LNQIYCIVYNGKDGPV----MSIQIAVEGIVSLAKRHPQY 92 Query: 135 ASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQI 194 A V+E DEF + + +H+ + Y VA D ++T Q+ Sbjct: 93 GGFIASEVKEHDEFEIDV-VSGVPVHKITSLQRGKTIGAYCVAYRTDAPNIAVIITNDQV 151 Query: 195 ELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADS 254 + + K N W ++++M K AI+R FK IE+ S+ + + P + Sbjct: 152 DHL---LKGRNGQMWKDYFDDMIVKHAIKRAFKR-QYGIEVAEDESVGPETAASPSPYER 207 Query: 255 SVLTGEYS 262 +T E + Sbjct: 208 RDITSEVN 215 >UniRef50_A8U879 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U879_9LACT Length = 297 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 83/237 (35%), Gaps = 29/237 (12%) Query: 17 GNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRK------VPALG 70 N K ++ LP + +R A ++++ PAL Sbjct: 3 NNELVLQQKQIADSVEKKVSLFVKEGQLDLPGDYSPGNAMRSAWLKLQEVQTKDYKPALE 62 Query: 71 NCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARR 130 S +A++ GL P G Y + +G+K + Y G + + +R Sbjct: 63 VATKDSVANALLSMVVQGLNPEKNQG--YFIMYGSK--------LTFQRSYFGTMAVTKR 112 Query: 131 SGQIASLSARVVREGDEFSFEF--GLDEKLIHRPGEN--EDAPVTHVYAVARLKD-GGTQ 185 + +V+ EGD+ +++ G + L+H+ + YA + D Sbjct: 113 VTGATDIVGQVIYEGDDVTYDLTNGTIKNLVHKQKFGNINKDKIIGAYATVVMPDEKENH 172 Query: 186 FEVMTRKQIELVRSLSKAGNN--------GPWVTHWEEMAKKTAIRRLFKYLPVSIE 234 E+MT ++I S SK +EMAKKT I R K S + Sbjct: 173 IELMTFEEITAAWSQSKMWGKDQKAPKAGSTHDKFAQEMAKKTVINRACKNFINSSD 229 >UniRef50_Q8L268 DNA recombination protein n=1 Tax=Proteus vulgaris RepID=Q8L268_PROVU Length = 510 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 89/256 (34%), Gaps = 42/256 (16%) Query: 8 AKADLQKTQGNRAPAAVKNSDVISFINQP--SMKEQLAAALP--RHMTAERMIRIATTEI 63 +++ ++ ++ + +++++ A ++ + A I Sbjct: 7 SRSSYDNKSNSKKDTKANPMVLLDTATRHLVTLEKEFTVAASWNPSLSFAKESVFAKNVI 66 Query: 64 RKVPALGNC---DTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIG 120 L + SF +A +Q + GL AL AYL+P + V L + Sbjct: 67 NNNSYLTELAVQNPQSFGTAFLQLATSGLSLDPALKLAYLVPRMGR--------VFLDVS 118 Query: 121 YRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRP------------------ 162 Y G+ LA G + +V D F G + H Sbjct: 119 YIGLSRLATDEGLCQDIVVELVFTDDSFKSN-GRRQSPEHSFDPFADKGPLLLTPEEEKA 177 Query: 163 --GENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNN------GPWVTHWE 214 GE VY ++KDG +TR+++ RS+S + PW T Sbjct: 178 YTGERPRGVFRGVYVDYQMKDGRNLVYFLTRQELAAARSVSDSWKKTEKRAQSPWTTFPW 237 Query: 215 EMAKKTAIRRLFKYLP 230 +M +K+AI++ +P Sbjct: 238 QMVRKSAIKQTIHQIP 253 >UniRef50_Q14NF8 Putative rect protein n-terminal truncated n=1 Tax=Spiroplasma citri RepID=Q14NF8_SPICI Length = 197 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 7/146 (4%) Query: 117 LIIGYRGMIDLARRSGQIASLSARVVREGDEFSF---EFGLDEKLIHRPGENEDAPVTHV 173 + IGY+G I LA R+G+ +++A V++G+ +F E + K I E Sbjct: 1 MQIGYKGYIQLAIRTGKYLTINAIEVKQGELLNFDELEQEYNFKWITNENERTKKETIGY 60 Query: 174 YAVARLKDGGTQFEVMTRKQIE-LVRSLSKAGNNGPWVT--HWEEMAKKTAIRRLF-KYL 229 A +L +G + ++++ E ++ SK T +E MA KT + +L K+ Sbjct: 61 VAFFKLLNGYKKTLYWSKEKCENHFKTYSKNYQTYGKFTAGSYEGMALKTVLTQLLRKWG 120 Query: 230 PVSIEIQRAVSMDEKEPLTIDPADSS 255 +S+E+Q A D+ + S Sbjct: 121 IMSVEMQEAYQHDQAIIINNSKEFSD 146 >UniRef50_A6LTW5 RecT protein n=2 Tax=Clostridium RepID=A6LTW5_CLOB8 Length = 306 Score = 117 bits (294), Expect = 3e-25, Method: Composition-based stats. Identities = 54/224 (24%), Positives = 80/224 (35%), Gaps = 26/224 (11%) Query: 46 LPRHMTAERMIRIATTEIR------KVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAY 99 LP++ +AE I A ++ K AL C S V A+ GL P Y Sbjct: 32 LPKNYSAENAINSAWLMLQEVVDKEKKQALEVCTKTSIVEALYNMVLQGLSPSKR--QCY 89 Query: 100 LLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLI 159 + G+K + L+ Y G I +R I + A V+ EGD F F + I Sbjct: 90 FIVHGSK--------LTLMKSYMGSIVATKRLSGIKDVKAFVIYEGDVFETVFNNETYTI 141 Query: 160 H-----RPGENEDAPVTHVYA-VARLKDGGTQFEVMTRKQIELVRS---LSKAGNNGPWV 210 + + +A + + E+MT QI K+G + Sbjct: 142 EFNYQPKFENINSNKIKGAFALIIGDDNKLLHTEIMTIDQIRKSWGMGIAYKSGKSNTHN 201 Query: 211 THWEEMAKKTAIRRLFK-YLPVSIEIQRAVSMDEKEPLTIDPAD 253 EEMAKK+ I R K + S + + D AD Sbjct: 202 DFGEEMAKKSVINRACKRFYNTSDDSDVLIESLNNTDEDYDEAD 245 >UniRef50_C3XHV1 Predicted protein n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XHV1_9HELI Length = 147 Score = 113 bits (282), Expect = 7e-24, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 4/138 (2%) Query: 23 AVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIV 82 + ++V+ + ++E+L A + ++ + + I L C S V A + Sbjct: 7 QQRKNEVMVLLENKEIQERLCALCGNEASKDKF-KASLLNIALDSNLSACSMQSIVKASL 65 Query: 83 QCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVV 142 + L L LG AY++P + ++ IGY+G ++LA+RS S+ A V Sbjct: 66 DIAGLKLNLNKNLGKAYIVPRSVRQGNGYVTEARIDIGYKGWLELAKRSK--LSVKAHSV 123 Query: 143 REGDEFSFE-FGLDEKLI 159 + DEFS+ G++E + Sbjct: 124 FDCDEFSYNVMGVNENMT 141 >UniRef50_C1MEI7 DNA recombination protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1MEI7_9ENTR Length = 480 Score = 112 bits (281), Expect = 9e-24, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 70/208 (33%), Gaps = 35/208 (16%) Query: 49 HMTAERMIRIATTEIRKVPALGN---CDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGN 105 H++ ER A + L + + SF +A +Q + GL A AYL+P Sbjct: 11 HISFERECVFAKHIVNNNNFLADIAVNNPKSFETAFLQLASSGLTLDPAQKQAYLVPRDG 70 Query: 106 KNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGE- 164 + V L + Y G+ +A G + A +V + D F G H Sbjct: 71 R--------VILDVSYIGLSRMATDEGLCEDIVAELVFDKDSFKTN-GRRSSPDHEFDPF 121 Query: 165 ----------------NEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAG---- 204 + Y +KDG + + + R+ S++ Sbjct: 122 AYKGGLVLTNTDQGDLGDRGMFRGAYVDYLMKDGRHLVFFIDLQDLAQSRAKSESWAKVE 181 Query: 205 --NNGPWVTHWEEMAKKTAIRRLFKYLP 230 PW +M K+AI++ +P Sbjct: 182 KRQYSPWTQFPWKMVLKSAIKQTIHLIP 209 >UniRef50_Q1CP37 RecT protein n=5 Tax=Streptococcus pyogenes RepID=Q1CP37_STRPF Length = 185 Score = 107 bits (266), Expect = 5e-22, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 4/106 (3%) Query: 163 GENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELV-RSLSKAGNNGPWVTHWEEMAKKTA 221 + +A +L +G + T +++ + SK+ +GPW T ++ MA+KT Sbjct: 9 FSKPQDEIVGYFAAFKLFNGFEKVSFWTVEKVTAHGKKFSKSFASGPWKTDFDAMAQKTI 68 Query: 222 IRR-LFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDN 266 ++ L KY P+S+E+Q+A+ D ++ P D + E + +D+ Sbjct: 69 LKDILSKYGPLSVEMQKAIEEDNQDSTISTPKD--ITPQEANSLDD 112 >UniRef50_D2BK83 Phage protein n=2 Tax=root RepID=D2BK83_LACLK Length = 308 Score = 83.6 bits (205), Expect = 6e-15, Method: Composition-based stats. Identities = 53/270 (19%), Positives = 88/270 (32%), Gaps = 53/270 (19%) Query: 18 NRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSF 77 N + +N + + +P++ AE + T + V + Sbjct: 3 NEIQVTTAEQYQKAALNTLKRQITMGVNIPKNFDAEGAL--GYTALAIVNSGVTVSKEVI 60 Query: 78 VSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIAS- 136 V +++ + GL Y++P + K V L+ Y G LA +I Sbjct: 61 VDTLIKVASKGL--DPRKDQLYVIP-------NKKGQVMLMESYFGYEKLAYDIPEIERG 111 Query: 137 -LSARVVREGDEFSFEFGLDEKLIHRPGENE-DAPVTHVYAVARLKDGGTQFEVMTRKQI 194 + A VVR+G+ SF+ L H D + YA ++ D M+ QI Sbjct: 112 SIFAEVVRQGETVSFQ---GRTLEHERAFEAIDNDIIGAYAKVKIGD-EEIAHYMSVYQI 167 Query: 195 ELVRS-----------------LSKAGN-----------------NGPWVTHWEEMAKKT 220 S K+ N EEM+K+T Sbjct: 168 SKSWSKTNSLDKNFVEEQRHNNYGKSWTVKVADTSKIEKGKLTAFNKNQEDFPEEMSKRT 227 Query: 221 AIRRLFKYLPVS-IEIQRAVSMDEKEPLTI 249 I+ L K + S E A ++D E T+ Sbjct: 228 VIKALLKPIIKSYAEPTSAAALDNNEEGTV 257 >UniRef50_B2KDD4 Putative uncharacterized protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDD4_ELUMP Length = 284 Score = 83.6 bits (205), Expect = 6e-15, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 73/196 (37%), Gaps = 13/196 (6%) Query: 71 NCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARR 130 D S A G+ + AYL KN +GK +Q GY G + R+ Sbjct: 58 EVDVQSIKEAFKCSMDTGIPVDNRR-LAYLTI--VKNNSTGKYEIQYEPGYMGFVHKLRQ 114 Query: 131 SGQIASLSARVVREGDEFSFE----FGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQF 186 A + ++ E D F+++ + +P ++ + + + G ++ Sbjct: 115 IKPGAVVQTILLWEKDVFTYKSTTGVAEYSYVPEKPMRSDFNHIIGGFCYISYFEHGREY 174 Query: 187 EV---MTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKY-LPVSIEIQRAVSMD 242 MT+ +++L R KA W EM KK I+R K E+++ +D Sbjct: 175 SFVTPMTKAELDLAR--GKAKTQDVWGVWPGEMYKKVIIKRAGKVEFIGEPEMEKLNEID 232 Query: 243 EKEPLTIDPADSSVLT 258 ++ + + + Sbjct: 233 DRSYTGFERKQPAKVD 248 >UniRef50_Q4EN42 RecT protein, putative n=5 Tax=Listeria monocytogenes RepID=Q4EN42_LISMO Length = 303 Score = 80.5 bits (197), Expect = 6e-14, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 77/210 (36%), Gaps = 29/210 (13%) Query: 70 GNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLAR 129 N F + C GL P L H Y + +GN + + I G+ LAR Sbjct: 31 KNSTPQEFELFVQVCKNSGLNPF--LNHVYFIKYGN--------QMNIQISVEGVEYLAR 80 Query: 130 RSGQIASLSARVVREGDEFSF---EFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQF 186 RS + ++V E DE F E G+ H G VT YA+AR ++ Sbjct: 81 RSEGYRGIDVQLVHEKDEIRFGRNEQGVMTVTKHEFGF-PRGKVTGGYAIARKEN---FP 136 Query: 187 EVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDE--- 243 + + +E V + N W ++ +M KK I+R K + + DE Sbjct: 137 DFVVVMDVEEVEHMKNGTNKNMWSKYFNDMFKKHLIKRAAK-----TQFGIEIGEDEMLP 191 Query: 244 ----KEPLTIDPADSSVLTGEYSVIDNSEE 269 + +P +T I+ EE Sbjct: 192 SNGIENEQEYNPGQRKDITPAQKTIETDEE 221 >UniRef50_A0L2V3 Putative uncharacterized protein n=1 Tax=Shewanella sp. ANA-3 RepID=A0L2V3_SHESA Length = 215 Score = 79.3 bits (194), Expect = 1e-13, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 63/188 (33%), Gaps = 10/188 (5%) Query: 41 QLAAALPRHMTAERMIRIATTEIRK----VP-ALGNCDTMSFVSAIVQCSQLGLEPGSAL 95 + A P + + I ++++ P +G + S + + +Q + Sbjct: 20 EFNTAYPNNNFPYSELNILFAQLQRLLMLNPSQIGWVNIHSVFDVMTELTQAQISLNPNR 79 Query: 96 GHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLD 155 A +L SG VQL YRG D A ++G I S +V E D+F + Sbjct: 80 KQASIL--LGAYYDSGWLGVQLCWTYRGYRDAAAKAGIIRSARPVIVYEADDFQWIDSFT 137 Query: 156 -EKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWE 214 + + P + Y VA L GG T + + W + Sbjct: 138 PPRHQYDPFSKNRGNIRGAYCVAELAGGGVCVTHFTFDDLMTTFEHRQVATRA-WNEFFV 196 Query: 215 EMAK-KTA 221 M KT Sbjct: 197 GMILAKTV 204 >UniRef50_B7AAL6 RecT protein n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAL6_THEAQ Length = 308 Score = 68.1 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 17/158 (10%) Query: 78 VSAIVQCSQ-LGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIAS 136 A + +Q LGL+P S ++P + + G+ V I+ G + A R A Sbjct: 27 FQAFLLVAQKLGLDPVSRE----IIP-QVREGQHGR-QVAFIVSRDGYLKAAMRDPGFAG 80 Query: 137 LSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIEL 196 L + VVREGD F + K++HR G + +A+A K+ Sbjct: 81 LQSMVVREGDTFEI-HPSEGKVVHRFGSK-RGEILGAWAIAYHKERPPVIFF------AD 132 Query: 197 VRSLSKAGNNGP-WVTHWEEMAKKTA-IRRLFKYLPVS 232 + +A P W T+ M +K A + L + P+S Sbjct: 133 FKEYYEANKTSPTWRTYPSAMIQKVAEVGALRRQFPLS 170 >UniRef50_UPI0001BC8619 hypothetical protein BacD2_23915 n=1 Tax=Bacteroides sp. D2 RepID=UPI0001BC8619 Length = 324 Score = 65.1 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 59/164 (35%), Gaps = 20/164 (12%) Query: 63 IRKVPALGNCDTMSFVSAIVQCSQLGLEPG-SALGHAYLLPFGNKNEKSGKKNVQL---- 117 +R P L + MS + + GL + Y+L +++ K+G KN Q Sbjct: 58 LRDNPDLADSTKMSLYGCFLDIAVNGLTLDQTGHPLCYIL---SRSSKTGHKNAQGYDIY 114 Query: 118 -------IIGYRGMIDLARRSGQIASL-SARVVREGDEFSFEF--GLDEKLIHRPGENED 167 + GY G + + R+GQI + VV EGD F G+ Sbjct: 115 EKRAYVSVTGY-GELTMRMRAGQIKYADNPVVVYEGDHFKASLVNGIKNIEYEAQCPRTS 173 Query: 168 APVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVT 211 V + D ++ + IE ++ S+ N+ W Sbjct: 174 TKVIAAFIRIVRNDNSVDYQWLMEGDIERLKHYSEKANSK-WND 216 >UniRef50_B0N8M1 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N8M1_9FIRM Length = 315 Score = 63.9 bits (154), Expect = 6e-09, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 84/211 (39%), Gaps = 33/211 (15%) Query: 85 SQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLA-----RRSGQIASLSA 139 ++LGL +L N K+GKK++ + I Y+G L + G + ++ Sbjct: 83 ARLGLSLND--KEIWLDIRNN--TKAGKKDINIKIQYQGEEKLLSKFCKKNHG-VKNIIK 137 Query: 140 RVVREGDEF----SFEFGLDEKLIHRPGE--------NEDAPVTHVYAVARLKDGGTQFE 187 VV EG+E F+ G E + H+ + V YAVA +G Sbjct: 138 DVVLEGEELVQKRDFKTGDYEIIDHKIPDILNRNIDFKNKDKVKGAYAVAYHNNGSQTAI 197 Query: 188 VMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIR----RLFKYLPVSIEIQR-----A 238 ++ + +I+ +K W + +++M KT + L K+ + E+ + Sbjct: 198 IIDKDRIDRAMKAAKTAM--VWQSDFKKMVLKTVVHELYQELAKFNVIPDELLKDYSEMV 255 Query: 239 VSMDEKEPLTIDPADSSVLTGEYSVIDNSEE 269 ++ +E + A+ + ++ D + E Sbjct: 256 IAKNEVQSEINANANKEFIDVDFVENDAAPE 286 >UniRef50_UPI00016930B5 hypothetical protein Plarl_00518 n=2 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016930B5 Length = 226 Score = 61.2 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 28/198 (14%) Query: 34 NQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGS 93 NQ ++ ++ A + +++ T I P + + F+ + + L Sbjct: 4 NQITLTPEINEAFKPEV-----LQVIRTSI--CPTASDAE---FMLFAHKAATYRL--DP 51 Query: 94 ALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFG 153 + + +GN + AR ++V E DEF Sbjct: 52 FKNEIFFIKYGNTARIQFAAEA--------YLAKAREKEGFQPPDTQMVCENDEFKVSKN 103 Query: 154 LD----EKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPW 209 + E H G + Y++A VM R ++E + N W Sbjct: 104 PETKELEVFEHEIGF-PRGKIIGAYSIAYRDGYRPVTVVMDRSEVEHM---FTGQNKDNW 159 Query: 210 VTHWEEMAKKTAIRRLFK 227 +M K +R K Sbjct: 160 NKWTADMFGKHVEQRALK 177 >UniRef50_A0L2V4 Putative uncharacterized protein n=1 Tax=Shewanella sp. ANA-3 RepID=A0L2V4_SHESA Length = 240 Score = 60.4 bits (145), Expect = 6e-08, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 14/144 (9%) Query: 85 SQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVRE 144 + GL YL + + ++ + Y G +DLA +SG+I + A +RE Sbjct: 54 AATGLSWSPGENLLYL-------ALNDEGQIETKLTYIGGLDLALQSGEIQAYQAWAIRE 106 Query: 145 GDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAG 204 GD + + + A A L G E ++ +I+ + S A Sbjct: 107 GDSIRVFNDRMPLVSLVGLSPKRGELRGGIASALLPSG----EYVSF-EIDQIELESVAE 161 Query: 205 NNG-PWVTHW-EEMAKKTAIRRLF 226 N W + + +EM KK A+ RL Sbjct: 162 NGSEVWQSIYVDEMVKKQALWRLL 185 >UniRef50_Q14KS4 Putative uncharacterized protein n=2 Tax=Spiroplasma citri RepID=Q14KS4_SPICI Length = 295 Score = 60.4 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 74/177 (41%), Gaps = 13/177 (7%) Query: 100 LLPF--GNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEK 157 ++PF +K++K ++ +I + SG + A ++ +G++F ++ Sbjct: 76 IIPFKKWDKDKKINSYSLTTVIDSKVYCKKIEESG-YSPRKA-IIFKGEKFEWDSLNSCP 133 Query: 158 LIHRPGENED----APVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNN--GPWVT 211 IH N + + YA A+ K+G Q ++ + I+ +++ S +GN+ PW Sbjct: 134 KIHEINFNANTSDYNEIIGAYAFAKDKNGNYQGILLRKADIDRLKNSSPSGNSEYSPWNK 193 Query: 212 HWEEMAKKTAIRRLFKYL---PVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVID 265 +EM + R+L + I++ ++ I D V + + D Sbjct: 194 WPKEMVEAKLYRKLALEIGTDISDIDLDEKEIKEDGNFEYISFKDIDVAKNKGQMSD 250 >UniRef50_B5D087 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5D087_9BACE Length = 319 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 57/162 (35%), Gaps = 16/162 (9%) Query: 63 IRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGH--AYLLPFGNK--------NEKSGK 112 +R P + MS + + GL GH Y+L K N+ K Sbjct: 58 LRDNPDVSTSSKMSLYGCFLDIAVNGLTLD-QTGHPLCYILSRNCKTGYKNEHGNDIYEK 116 Query: 113 KNVQLIIGYRGMIDLARRSGQIASL-SARVVREGDEFSFEFGLDEKLIHRPGE--NEDAP 169 + + GY G + + R+GQI + VV EGD F K I + Sbjct: 117 RAYVSVTGY-GELTMRMRAGQIKYADNPVVVYEGDHFKASLVNGVKNIEYEAQCPRTSTK 175 Query: 170 VTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVT 211 V + D ++ + + IE ++ S+ N+ W Sbjct: 176 VIAAFIRIVRNDNSVDYQWLMQGDIERLKHYSEKANSK-WNE 216 >UniRef50_C5UY99 Phage recombination protein Bet n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UY99_CLOBO Length = 323 Score = 47.0 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 62/177 (35%), Gaps = 22/177 (12%) Query: 57 RIATTEIRKVPALGNCDTMSFVS-----AIVQCSQLGLEPGSALGHAYLLPFGNKNEKSG 111 +I T+ L N D + + ++ C GL P + A+L+ FGN+ Sbjct: 17 KIELTQGMVKQYLVNGDVRAVTNEEIGMFMMLCKSQGLNPF--VKEAHLIKFGNRP---- 70 Query: 112 KKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVT 171 +I+G A R+ + A V+ + E+ + + Sbjct: 71 ---ATMIVGKDAFTKRANRNPNYEGVEAGVIVVNFKKEIEYREGSFYV-----KNGEQLV 122 Query: 172 HVYAVARLKDG-GTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFK 227 +A K+ ++ + E ++ KA N W T M +K A+ + + Sbjct: 123 GGWAKVHTKNKKFADMITVSYDEYEGKKADGKA--NSNWSTRPGTMIRKVALVQALR 177 >UniRef50_Q1DAT2 Phage recombination protein Bet n=2 Tax=Cystobacterineae RepID=Q1DAT2_MYXXD Length = 364 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 8/104 (7%) Query: 83 QCSQLGLEPGSALGHAYLLPF----GNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLS 138 QC + GL L A+ + GN+ + + GM+ A R + Sbjct: 51 QCKRSGL--DPLLKEAFCVARRQNAGNRERPNWVTKYEFQPSEAGMLARAERFPDFKGIQ 108 Query: 139 ARVVREGDEFSFEFGLDEKLIHRPGE-NEDAPVTHVYAVARLKD 181 A V D+ + G E ++HR + ++ +D Sbjct: 109 ASAVFAEDDIVVDQGRGE-VVHRFNPAKRKGALVGAWSRVVRED 151 >UniRef50_A6TRD8 Phage recombination protein Bet n=4 Tax=Clostridiaceae RepID=A6TRD8_ALKMQ Length = 264 Score = 43.5 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 43/137 (31%), Gaps = 21/137 (15%) Query: 91 PGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSF 150 L AYL+ F QLI + A + + A ++ Sbjct: 54 LNPFLNEAYLVKFKG-------APAQLITSKEAYMKRAFDHPKFDGIKAGII-------V 99 Query: 151 EFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWV 210 + G + + + +A +KD ++ +T+ I+ W Sbjct: 100 QRGEETLELEGSFSLPGDQLLGGWAEVYVKD--KKYPYITKINIDEF-----NKGQATWK 152 Query: 211 THWEEMAKKTAIRRLFK 227 + M +KTA+ + + Sbjct: 153 AMPKTMIRKTALVQALR 169 >UniRef50_A7ILD9 Putative uncharacterized protein n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7ILD9_XANP2 Length = 369 Score = 42.7 bits (99), Expect = 0.013, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 26/150 (17%) Query: 73 DTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSG 132 + + AI+ +LG+ P +AL ++ + G I L R SG Sbjct: 44 NVQAVAIAIMTGLELGVPPMTALQRIAVI--NGRPTIWGDLA----------IALVRASG 91 Query: 133 QIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRK 192 ++ ++ EGD + + + V ++VA D R+ Sbjct: 92 LAETIKEEILGEGD-------DRVAICTVKRKGDPQQVVGSFSVA---DAKRARLWDPRE 141 Query: 193 QIELVRS----LSKAGNNGPWVTHWEEMAK 218 +++ R +A N+ PW E M K Sbjct: 142 KVQRRRQDGNGTYEALNDAPWHRFPERMMK 171 >UniRef50_B6GAM9 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAM9_9ACTN Length = 270 Score = 42.3 bits (98), Expect = 0.015, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 66/229 (28%), Gaps = 47/229 (20%) Query: 54 RMIRIATTEIRKVPA------LGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKN 107 + + ++ P N + C L P + AYL+ +G Sbjct: 6 KFTDDSGLAVQVTPDDVRRYICENATEKEVGLFLQLCQTQRLNPF--VKDAYLVKYGG-- 61 Query: 108 EKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPG---- 163 +I Y+ A R + + VV D ++H+ G Sbjct: 62 -----APASMITSYQVFNRRACRDANYDGIKSGVV---------VLRDGDVVHKRGAACY 107 Query: 164 ENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIR 223 + + +A R KDG ++ + S +N W M +K A Sbjct: 108 KKAGEELIGGWAEVRFKDGRETA----YAEV-ALDDYSTGKSN--WAKMPGVMIEKCA-- 158 Query: 224 RLFKY----------LPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYS 262 + + + + E+ +A ++ P D + + Sbjct: 159 KAAAWRLAFPDTFQGMYAAEEMDQAQQPEQVRAQAEQPVDLQPIRELFK 207 >UniRef50_A8ATK8 Gp50 n=3 Tax=root RepID=A8ATK8_9CAUD Length = 261 Score = 42.0 bits (97), Expect = 0.024, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 44/153 (28%), Gaps = 18/153 (11%) Query: 70 GNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLAR 129 + + C L P L AYL+ F KN K K Q+I+ + A Sbjct: 44 AEVTDQEIIMFLQLCKYQKLNPF--LNEAYLVKF--KNTKGPDKPAQIIVSKEAFMKRAE 99 Query: 130 RSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVM 189 Q A V+ E G + + + +A KD V Sbjct: 100 THEQYDGFEAGVI-------VERGGEIIELEGAVSLASDKLLGGWAKVFRKDRNRPVSV- 151 Query: 190 TRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAI 222 + W T M +KTA+ Sbjct: 152 ------RISEKEFNKRQSTWNTMPLTMMRKTAV 178 >UniRef50_Q1CQT2 Phage protein, RecT family n=4 Tax=Streptococcus RepID=Q1CQT2_STRPC Length = 263 Score = 41.6 bits (96), Expect = 0.031, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 52/161 (32%), Gaps = 20/161 (12%) Query: 73 DTMSFVSAIVQCSQLGL----EPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLA 128 D + +S L L Y++ + N + + LI+ + A Sbjct: 31 DPQNLLSEKQVGQALALCKGRNLNPFANEVYIVAYKNNSG----TDFSLIVSKEAFMKRA 86 Query: 129 RRSGQIASLSAR--VVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQF 186 R A V+R G+ E L D + +A+ KD ++ Sbjct: 87 ERCEGYDGFEAGITVMRNGEMVEIEGSLK---------LPDDVLIGGWAIVYRKDRSHRY 137 Query: 187 EVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFK 227 +V T E V+ W + M +KTA+ + + Sbjct: 138 KV-TVDFNEYVKLDKYGNPRSTWKSMPGTMIRKTALVQTLR 177 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P33228 Protein recT n=37 Tax=root RepID=RECT_ECOLI 344 2e-93 UniRef50_C9S1B3 RecT protein n=15 Tax=root RepID=C9S1B3_GEOSY 289 9e-77 UniRef50_A6LN18 RecT protein n=2 Tax=Bacteria RepID=A6LN18_THEM4 286 6e-76 UniRef50_A8RIH0 Putative uncharacterized protein n=1 Tax=Clostri... 274 2e-72 UniRef50_Q9AKZ0 Putative uncharacterized protein n=1 Tax=Legione... 273 4e-72 UniRef50_C5EMH8 RecT protein n=3 Tax=Clostridiales RepID=C5EMH8_... 271 2e-71 UniRef50_C9LU62 Protein RecT n=2 Tax=Selenomonas RepID=C9LU62_9FIRM 269 5e-71 UniRef50_A9I8T0 Phage-related DNA recombination protein n=11 Tax... 267 3e-70 UniRef50_B9EBP3 Putative uncharacterized protein n=1 Tax=Macroco... 265 1e-69 UniRef50_Q7P5T6 RecT protein n=1 Tax=Fusobacterium nucleatum sub... 264 2e-69 UniRef50_UPI00016C62AB recombination and repair protein RecT n=1... 261 2e-68 UniRef50_Q38143 35 protein n=1 Tax=Bacillus phage SPP1 RepID=Q38... 260 3e-68 UniRef50_A7VTD0 Putative uncharacterized protein n=1 Tax=Clostri... 258 1e-67 UniRef50_C0W9K5 Recombination and repair protein recT n=1 Tax=Ac... 255 1e-66 UniRef50_C3WEC1 RecT protein n=1 Tax=Fusobacterium mortiferum AT... 249 1e-64 UniRef50_B2JU71 RecT protein n=1 Tax=Burkholderia phymatum STM81... 244 2e-63 UniRef50_C3KZR3 RecT n=1 Tax=Clostridium botulinum Ba4 str. 657 ... 238 2e-61 UniRef50_C2CG07 Recombination and repair protein RecT n=1 Tax=An... 235 9e-61 UniRef50_C0ZFI5 Putative uncharacterized protein n=1 Tax=Breviba... 234 3e-60 UniRef50_C9AMX6 Recombinase n=11 Tax=Enterococcus faecium RepID=... 231 2e-59 UniRef50_C4VG97 RecT family protein n=19 Tax=root RepID=C4VG97_E... 231 3e-59 UniRef50_C5V0B4 RecT protein n=1 Tax=Gallionella ferruginea ES-2... 226 6e-58 UniRef50_B3WCF3 RecT protein n=2 Tax=Lactobacillus casei group R... 226 7e-58 UniRef50_A0QB14 YqaK protein n=4 Tax=root RepID=A0QB14_MYCA1 226 9e-58 UniRef50_P45908 Uncharacterized protein yqaK n=15 Tax=root RepID... 224 2e-57 UniRef50_B3WDD8 RecT protein n=3 Tax=Lactobacillus casei group R... 216 5e-55 UniRef50_C0A3T3 Recombinational DNA repair protein (RecE pathway... 216 5e-55 UniRef50_Q2G4T8 Rect protein n=1 Tax=Novosphingobium aromaticivo... 214 2e-54 UniRef50_Q4QKZ2 Predicted recombinational DNA repair protein, Re... 213 6e-54 UniRef50_B1KTX5 RecT family protein n=2 Tax=Clostridium botulinu... 209 6e-53 UniRef50_C5WGX9 RecT protein n=7 Tax=Streptococcus RepID=C5WGX9_... 209 7e-53 UniRef50_B8IIR3 RecT protein n=3 Tax=Methylobacterium RepID=B8II... 206 5e-52 UniRef50_D2L6Y9 RecT protein n=1 Tax=Desulfovibrio sp. FW1012B R... 205 1e-51 UniRef50_C5IHJ8 Gp06 n=2 Tax=unclassified Podoviridae RepID=C5IH... 204 2e-51 UniRef50_A7A5B7 Putative uncharacterized protein n=1 Tax=Bifidob... 203 5e-51 UniRef50_A9BYL3 RecT protein n=3 Tax=Burkholderiales RepID=A9BYL... 199 8e-50 UniRef50_A5MYQ8 Phage-related rekombinase protein n=2 Tax=Clostr... 199 8e-50 UniRef50_B3H0V7 Possible phage recombinase n=6 Tax=Proteobacteri... 199 1e-49 UniRef50_C0CR08 Putative uncharacterized protein n=1 Tax=Blautia... 198 1e-49 UniRef50_Q854T9 Gp61 n=1 Tax=Mycobacterium phage Che9c RepID=Q85... 197 3e-49 UniRef50_A8RCV0 Putative uncharacterized protein n=2 Tax=Firmicu... 197 3e-49 UniRef50_C0YSU1 Probable RecT protein n=2 Tax=Flavobacteriaceae ... 196 5e-49 UniRef50_A9DEN8 DNA recomination protein n=1 Tax=Yersinia phage ... 194 2e-48 UniRef50_Q9AZQ0 RecT n=2 Tax=root RepID=Q9AZQ0_9CAUD 193 5e-48 UniRef50_C4ZCC7 RecT family protein n=1 Tax=Eubacterium rectale ... 193 5e-48 UniRef50_C3Q0Z8 RecT family protein n=2 Tax=Bacteroides RepID=C3... 191 2e-47 UniRef50_B6JI05 Rect protein n=1 Tax=Oligotropha carboxidovorans... 189 1e-46 UniRef50_C3X3A2 RecT family protein n=1 Tax=Oxalobacter formigen... 188 2e-46 UniRef50_C8U7M5 Predicted DNA recombination protein Bet n=14 Tax... 188 2e-46 UniRef50_C3WER4 Putative uncharacterized protein n=2 Tax=Fusobac... 187 3e-46 UniRef50_A1U8M4 RecT protein n=1 Tax=Marinobacter aquaeolei VT8 ... 187 5e-46 UniRef50_Q6AC64 Phage recombination protein n=1 Tax=Leifsonia xy... 184 2e-45 UniRef50_C9PZW7 RecT family protein n=3 Tax=Bacteroidales RepID=... 184 4e-45 UniRef50_Q14MJ4 Putative rect protein n=1 Tax=Spiroplasma citri ... 182 8e-45 UniRef50_A4XBY1 RecT protein n=1 Tax=Salinispora tropica CNB-440... 180 5e-44 UniRef50_C2FKJ7 Recombination protein RecT n=2 Tax=Lactobacillus... 178 1e-43 UniRef50_Q03VK6 Recombinational DNA repair protein (RecE pathway... 178 2e-43 UniRef50_B1XAU6 RecT protein n=3 Tax=Enterobacteriaceae RepID=B1... 175 1e-42 UniRef50_D0AR03 RecT protein n=2 Tax=Enterococcus faecium RepID=... 174 3e-42 UniRef50_C7Q4I7 RecT protein n=1 Tax=Catenulispora acidiphila DS... 173 5e-42 UniRef50_A5N589 Phage-related protein n=16 Tax=Clostridium RepID... 173 5e-42 UniRef50_B1QU69 RecT family protein n=2 Tax=Clostridium butyricu... 172 8e-42 UniRef50_B2GBH1 Hypothetical phage protein n=1 Tax=Lactobacillus... 171 2e-41 UniRef50_A8Z301 Possible recombination protein RecT n=32 Tax=roo... 171 3e-41 UniRef50_C7WI33 Prophage Lp1 protein 18 n=11 Tax=Enterococcus Re... 169 1e-40 UniRef50_Q708Q2 Putative uncharacterized protein n=2 Tax=root Re... 167 4e-40 UniRef50_B4AH83 RecT protein n=1 Tax=Bacillus pumilus ATCC 7061 ... 165 1e-39 UniRef50_A0M496 RecT family protein n=1 Tax=Gramella forsetii KT... 165 2e-39 UniRef50_Q14KA3 Putative rect protein n=3 Tax=Spiroplasma citri ... 162 1e-38 UniRef50_A5VKM2 RecT protein n=8 Tax=Lactobacillus reuteri RepID... 161 3e-38 UniRef50_C0Q2I7 Rac prophage; recombination and repair protein n... 159 8e-38 UniRef50_C0WT85 Putative uncharacterized protein n=1 Tax=Lactoba... 159 1e-37 UniRef50_Q3C0K4 RecT protein n=2 Tax=root RepID=Q3C0K4_SODGL 159 1e-37 UniRef50_A8U879 Putative uncharacterized protein n=1 Tax=Carnoba... 156 7e-37 UniRef50_C7THK4 RecT family protein n=4 Tax=Lactobacillales RepI... 155 2e-36 UniRef50_B7XGP3 DNA recombination protein n=2 Tax=Pseudomonas Re... 154 2e-36 UniRef50_C8PFI2 Phage recombination protein Bet n=1 Tax=Campylob... 150 4e-35 UniRef50_Q8L268 DNA recombination protein n=1 Tax=Proteus vulgar... 149 1e-34 UniRef50_C1MEI7 DNA recombination protein n=1 Tax=Citrobacter sp... 146 9e-34 UniRef50_A6LTW5 RecT protein n=2 Tax=Clostridium RepID=A6LTW5_CLOB8 145 1e-33 UniRef50_C6CX43 RecT protein n=2 Tax=Paenibacillus RepID=C6CX43_... 139 1e-31 UniRef50_A0L2V3 Putative uncharacterized protein n=1 Tax=Shewane... 125 2e-27 UniRef50_B2KDD4 Putative uncharacterized protein n=1 Tax=Elusimi... 124 3e-27 UniRef50_Q14NF8 Putative rect protein n-terminal truncated n=1 T... 116 9e-25 UniRef50_D2BK83 Phage protein n=2 Tax=root RepID=D2BK83_LACLK 114 3e-24 UniRef50_C3XHV1 Predicted protein n=1 Tax=Helicobacter bilis ATC... 110 4e-23 UniRef50_Q4EN42 RecT protein, putative n=5 Tax=Listeria monocyto... 109 1e-22 UniRef50_Q1CP37 RecT protein n=5 Tax=Streptococcus pyogenes RepI... 106 1e-21 UniRef50_UPI00016930B5 hypothetical protein Plarl_00518 n=2 Tax=... 105 2e-21 UniRef50_B7AAL6 RecT protein n=1 Tax=Thermus aquaticus Y51MC23 R... 97 4e-19 UniRef50_Q14KS4 Putative uncharacterized protein n=2 Tax=Spiropl... 95 3e-18 UniRef50_UPI0001BC8619 hypothetical protein BacD2_23915 n=1 Tax=... 92 2e-17 UniRef50_B0N8M1 Putative uncharacterized protein n=1 Tax=Clostri... 91 4e-17 UniRef50_B5D087 Putative uncharacterized protein n=1 Tax=Bactero... 90 6e-17 UniRef50_A0L2V4 Putative uncharacterized protein n=1 Tax=Shewane... 89 2e-16 UniRef50_C5UY99 Phage recombination protein Bet n=1 Tax=Clostrid... 84 3e-15 UniRef50_Q1DAT2 Phage recombination protein Bet n=2 Tax=Cystobac... 79 2e-13 Sequences not found previously or not previously below threshold: UniRef50_A8ATK8 Gp50 n=3 Tax=root RepID=A8ATK8_9CAUD 60 6e-08 UniRef50_A6TRD8 Phage recombination protein Bet n=4 Tax=Clostrid... 59 2e-07 UniRef50_Q1CQT2 Phage protein, RecT family n=4 Tax=Streptococcus... 55 2e-06 UniRef50_B6GAM9 Putative uncharacterized protein n=1 Tax=Collins... 55 3e-06 UniRef50_C5RN39 Phage recombination protein Bet n=1 Tax=Clostrid... 54 6e-06 UniRef50_A5GYJ1 Sak n=9 Tax=root RepID=A5GYJ1_9CAUD 53 1e-05 UniRef50_A4XJG5 Phage recombination protein Bet n=2 Tax=Caldicel... 49 2e-04 UniRef50_C1CGI1 Phage recombination protein Bet n=2 Tax=Streptoc... 48 2e-04 UniRef50_Q4HNA9 Phage recombination protein Bet, putative n=4 Ta... 47 6e-04 UniRef50_A7DYD3 Putative uncharacterized protein n=1 Tax=Strepto... 46 0.001 UniRef50_Q18AA7 Putative phage recombination protein n=1 Tax=Clo... 46 0.001 UniRef50_C7MM83 Phage recombination protein Bet n=1 Tax=Cryptoba... 45 0.002 UniRef50_A1AQ73 Phage recombination protein Bet n=1 Tax=Pelobact... 45 0.003 UniRef50_Q3ABH5 Prophage LambdaCh01, recombination protein Bet n... 44 0.004 UniRef50_A7ILD9 Putative uncharacterized protein n=1 Tax=Xanthob... 44 0.004 UniRef50_C7IDX1 Putative uncharacterized protein n=1 Tax=Clostri... 42 0.019 UniRef50_D0GLJ4 Phage recombination protein Bet n=1 Tax=Leptotri... 42 0.021 UniRef50_C0QSA2 Putative uncharacterized protein n=1 Tax=Perseph... 42 0.025 UniRef50_A4E7B6 Putative uncharacterized protein n=1 Tax=Collins... 41 0.034 UniRef50_D1AH69 Phage recombination protein Bet n=1 Tax=Sebaldel... 40 0.096 >UniRef50_P33228 Protein recT n=37 Tax=root RepID=RECT_ECOLI Length = 269 Score = 344 bits (882), Expect = 2e-93, Method: Composition-based stats. Identities = 269/269 (100%), Positives = 269/269 (100%) Query: 1 MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIAT 60 MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIAT Sbjct: 1 MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIAT 60 Query: 61 TEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIG 120 TEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIG Sbjct: 61 TEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIG 120 Query: 121 YRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLK 180 YRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLK Sbjct: 121 YRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLK 180 Query: 181 DGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVS 240 DGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVS Sbjct: 181 DGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVS 240 Query: 241 MDEKEPLTIDPADSSVLTGEYSVIDNSEE 269 MDEKEPLTIDPADSSVLTGEYSVIDNSEE Sbjct: 241 MDEKEPLTIDPADSSVLTGEYSVIDNSEE 269 >UniRef50_C9S1B3 RecT protein n=15 Tax=root RepID=C9S1B3_GEOSY Length = 281 Score = 289 bits (739), Expect = 9e-77, Method: Composition-based stats. Identities = 127/268 (47%), Positives = 160/268 (59%), Gaps = 14/268 (5%) Query: 7 IAKADLQKTQ------GNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIAT 60 +A KTQ A + +++ M ++ ALP+HM A+RM RIA Sbjct: 1 MATNQTLKTQLANKAKNTEAAPPSPAQTIAAYLK--KMGPEIEKALPKHMDADRMARIAL 58 Query: 61 TEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIG 120 T IR P L C S + A++Q +QLGLEPG +GH YL+PF KN K+G+ +VQ IIG Sbjct: 59 TTIRTNPKLLECSVPSLLGAVMQAAQLGLEPG-LIGHCYLVPF--KNGKTGQSDVQFIIG 115 Query: 121 YRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLK 180 Y+GMIDLARRSG I S+ A V D F +E+GL KL+H+P YAVA K Sbjct: 116 YKGMIDLARRSGNIESIYAHAVYSNDTFEYEYGLHPKLVHKPAMTNRGEFIGAYAVAHFK 175 Query: 181 DGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVS 240 DGG QFE M +++IE R SKA NNGPWVT +EEMAKKT IR ++KYLP+SIEIQ+AV Sbjct: 176 DGGYQFEFMPKEEIEKRRKRSKAANNGPWVTDYEEMAKKTVIRHMWKYLPISIEIQQAVV 235 Query: 241 MDEKEPLTI--DPADSSVLTGE-YSVID 265 DE I DP + E Y VID Sbjct: 236 QDETVKKDITADPEPVDYIEAEAYEVID 263 >UniRef50_A6LN18 RecT protein n=2 Tax=Bacteria RepID=A6LN18_THEM4 Length = 300 Score = 286 bits (732), Expect = 6e-76, Method: Composition-based stats. Identities = 120/266 (45%), Positives = 163/266 (61%), Gaps = 8/266 (3%) Query: 1 MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIAT 60 M K I KA LQK G + PA K + + I M+ Q+ ALP+H+ ER RI Sbjct: 1 MAKVNEI-KAQLQKKGGTKPPA--KGNTLADLIK--KMEPQIKRALPKHLNVERFTRIIL 55 Query: 61 TEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIG 120 TE+RK P L +CD MSF++A++ +QLGLEPGS LG AY++P+ N+ K GK Q +G Sbjct: 56 TEVRKNPKLLDCDPMSFMAAMMTAAQLGLEPGSHLGQAYIIPYYNR--KLGKTLAQFQLG 113 Query: 121 YRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLK 180 Y+G+IDL RS Q ++ A V E DEF FE+GL KL H+P N V YAVA LK Sbjct: 114 YKGIIDLFYRSEQALNIDAHEVCENDEFEFEYGLHPKLYHKPSLNGRGKVIAYYAVAHLK 173 Query: 181 DGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVS 240 DGG F VM+ IE +R SK N GPW+T ++ MAKKT I++L KY+P+S+E+QR +S Sbjct: 174 DGGYSFMVMSVDDIEKIRKRSKTPNEGPWITDYDAMAKKTVIKQLLKYMPLSVELQRKLS 233 Query: 241 MDEKEPLTIDP-ADSSVLTGEYSVID 265 DE + + D + ++ +ID Sbjct: 234 TDETTKIELSEHMDEAPDETDWEIID 259 >UniRef50_A8RIH0 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RIH0_9CLOT Length = 266 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 97/249 (38%), Positives = 146/249 (58%), Gaps = 10/249 (4%) Query: 24 VKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQ 83 KN ++ + +++ ++ ALP +T ER R+A + I P L C MSF++A++ Sbjct: 23 TKNMTIVDMVK--ALEPEIRRALPAVLTPERFTRMALSSINNTPELAECTPMSFIAALLN 80 Query: 84 CSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVR 143 +QLGLEP + LG AYL+P+ NK GK Q +GY+G+IDLA R+GQ+ + A+VVR Sbjct: 81 AAQLGLEPNTPLGQAYLIPYKNK----GKLECQFQLGYKGLIDLAYRTGQVQIIQAQVVR 136 Query: 144 EGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELV---RSL 200 E D F +++GLD KL+H+PGE +T+VY + +L +GG FEV + +++ S Sbjct: 137 EFDSFEYQYGLDSKLVHKPGEGARGEITYVYGLFKLSNGGYGFEVSNKTEMDTFAARYSK 196 Query: 201 SKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGE 260 S PW +E MAKKT I+R+ KY P+S + Q+A+SMDE I D S + E Sbjct: 197 SFGSKYSPWTEDYESMAKKTVIKRVLKYAPISSDFQKALSMDETIKTGI-AVDMSEIRNE 255 Query: 261 YSVIDNSEE 269 + E Sbjct: 256 CLPEEAGSE 264 >UniRef50_Q9AKZ0 Putative uncharacterized protein n=1 Tax=Legionella pneumophila RepID=Q9AKZ0_LEGPN Length = 294 Score = 273 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 127/260 (48%), Positives = 172/260 (66%), Gaps = 8/260 (3%) Query: 13 QKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNC 72 + R+ V+ + Q MK ++A LP+H+T ERM RIA TE+RK P L C Sbjct: 3 TQKVDKRSMMVANQKTVMGLLEQ--MKGEIARCLPKHLTPERMARIAMTELRKTPKLQEC 60 Query: 73 DTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSG 132 D +SF+++I+Q +QLGLEPG LG YL+PF N K GK + GYRG +DLARRSG Sbjct: 61 DPLSFIASIMQAAQLGLEPG-ILGSCYLIPFWN--SKLGKFECTFMPGYRGFLDLARRSG 117 Query: 133 QIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRK 192 QI SL AR V E DEFS+EFGL E +IH+P + + VYAVA LKDGG QF+VM+++ Sbjct: 118 QIVSLVARSVYENDEFSYEFGLKENIIHKPAMDNKGQLIAVYAVAILKDGGHQFDVMSKE 177 Query: 193 QIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEP---LTI 249 +++ VR SK+ +NGPWVTH+EEMAKKT +RRLFK+LP S+E+Q+AVS+DE + I Sbjct: 178 EVDTVRETSKSKDNGPWVTHYEEMAKKTVLRRLFKWLPCSVEMQKAVSLDEMQEAGMQNI 237 Query: 250 DPADSSVLTGEYSVIDNSEE 269 A S ++ + ++ E Sbjct: 238 KVAASEEFDIDFVIDADTGE 257 >UniRef50_C5EMH8 RecT protein n=3 Tax=Clostridiales RepID=C5EMH8_9FIRM Length = 280 Score = 271 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 101/265 (38%), Positives = 153/265 (57%), Gaps = 12/265 (4%) Query: 9 KADLQKTQ--GNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKV 66 K +L+K KN ++ + +++ ++ ALP +T ER R+A + I Sbjct: 19 KNELEKRAAIQENPVRLTKNMTIVDMVK--ALEPEIRRALPAVLTPERFTRMALSAINNT 76 Query: 67 PALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMID 126 PAL +C MSF++A++ +QLGLEP + LG AY++P+ NK G Q +GY+GMID Sbjct: 77 PALADCTPMSFIAAMMNAAQLGLEPNTPLGQAYMIPYKNK----GVLECQFQLGYKGMID 132 Query: 127 LARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQF 186 LA R+GQ+ + A++VRE D F +++GL+ KL+HRPGEN+ +T +Y + RL +GG F Sbjct: 133 LAYRTGQVQMIQAQIVREYDYFEYQYGLEPKLVHRPGENDRGEITFIYGLFRLINGGYGF 192 Query: 187 EVMTRKQIELV---RSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDE 243 EV + ++ S S PW ++E+MAKKT I+R KY PVS + Q+A+SMDE Sbjct: 193 EVSNKADMDAFAAKYSKSFGSRYSPWTENYEDMAKKTVIKRALKYAPVSADFQKALSMDE 252 Query: 244 KEPLTIDPADSSVLTGEYSVIDNSE 268 I D S + E + E Sbjct: 253 TIKTEI-AVDMSEIRNECLPEPDGE 276 >UniRef50_C9LU62 Protein RecT n=2 Tax=Selenomonas RepID=C9LU62_9FIRM Length = 303 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 96/263 (36%), Positives = 138/263 (52%), Gaps = 10/263 (3%) Query: 11 DLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALG 70 +QK Q R + I SM+ Q+A ALP +T ER R+ T + L Sbjct: 8 AIQKAQEQRMAVQQGARSIKDLI--VSMEGQIAKALPSVLTPERFTRMVLTALSTNQKLR 65 Query: 71 NCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARR 130 C SF+ A++Q +QLG+EP + LG AYL+P+ NK G Q +GY+G++DLA R Sbjct: 66 ECTPQSFLGAMMQAAQLGVEPNTPLGQAYLIPYKNK----GILECQFQLGYKGLLDLAYR 121 Query: 131 SGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMT 190 SG++ + A V E D F +E GL+ KL H P E VTH YA+ + K GG F VM+ Sbjct: 122 SGEVTIIQAHEVYENDVFEYELGLEPKLRHVPTTGEKGAVTHYYAMFKTKSGGYGFHVMS 181 Query: 191 RKQIEL-VRSLSKAGNNG---PWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEP 246 R +++ R S+A G PW T+++EMAKKT ++ KY P+ E RA+S DE Sbjct: 182 RAEVDTFARKYSQAYKKGYSTPWTTNFDEMAKKTVLKACLKYAPIKTEFTRALSTDETIK 241 Query: 247 LTIDPADSSVLTGEYSVIDNSEE 269 I ++ + + E Sbjct: 242 TEIAADMTAAADETDYIEAEAVE 264 >UniRef50_A9I8T0 Phage-related DNA recombination protein n=11 Tax=Proteobacteria RepID=A9I8T0_BORPD Length = 399 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 113/249 (45%), Positives = 159/249 (63%), Gaps = 11/249 (4%) Query: 28 DVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQL 87 V +F S K LAA LP+H++A+RM++IA +R P L NC S + +VQCSQL Sbjct: 10 TVKTFFE--SQKGTLAAVLPKHVSADRMLKIALGAMRTTPKLMNCTLESLLGGVVQCSQL 67 Query: 88 GLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDE 147 GLEP + LGHAYL+PF N+ + G VQ+++GY+G+IDL+RRSGQ+ S++A V E D+ Sbjct: 68 GLEPNTPLGHAYLIPFDNRRK--GITEVQIVLGYKGLIDLSRRSGQVVSIAAHEVCENDK 125 Query: 148 FSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGN-- 205 F + +GLDE+L HRP +E V YAVA+LKDGG FEVM+R Q+E + S+ Sbjct: 126 FDYAYGLDERLDHRPAMDERGKVIAFYAVAKLKDGGHAFEVMSRAQVEKICDESQNYKFA 185 Query: 206 ----NGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPA-DSSVLTGE 260 W H+ EM +KT +RRLFKYLPVSIE+ A ++D+ + D + + GE Sbjct: 186 KDKAGSVWGQHFVEMGRKTVLRRLFKYLPVSIEMATAAALDDLNARGVSQELDINTIDGE 245 Query: 261 YSVIDNSEE 269 ++VI +E Sbjct: 246 FTVIPTGDE 254 >UniRef50_B9EBP3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EBP3_MACCJ Length = 276 Score = 265 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 115/256 (44%), Positives = 158/256 (61%), Gaps = 14/256 (5%) Query: 23 AVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIV 82 K + ++ M +A ALP+HM +R+ R+A T IR PAL + D S + A++ Sbjct: 22 QPKPQTIDDYMK--KMAPAMAQALPKHMDIDRLTRLAMTTIRTTPALKDADVGSLLGAVM 79 Query: 83 QCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVV 142 Q +QLGLEPG +GH YLLPF NKN+ G K VQ IIGY+GMIDLARRSG I S+ A V Sbjct: 80 QAAQLGLEPG-LMGHCYLLPFNNKNK--GIKEVQFIIGYKGMIDLARRSGHIKSIYAHAV 136 Query: 143 REGDEFSFEFGLDEKLIHRP-GENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLS 201 DEF +E GL+ KL+H+P E + YAVA KDGG QFE M++ IE + S Sbjct: 137 YSNDEFDYELGLESKLVHKPTMEPDKGEFIGAYAVAHFKDGGYQFEFMSKADIEKRKGRS 196 Query: 202 KAGNN--GPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTID------PAD 253 KA N+ PW + +EEMAKKT +R ++KYLP+S+E+Q+ V+ DE I P D Sbjct: 197 KAANSKFSPWTSDYEEMAKKTVVRHMWKYLPISVEVQQQVAYDEGTGKDISKIKDVTPDD 256 Query: 254 SSVLTGEYSVIDNSEE 269 + + +Y ++D ++E Sbjct: 257 TLLEAPDYELLDITDE 272 >UniRef50_Q7P5T6 RecT protein n=1 Tax=Fusobacterium nucleatum subsp. vincentii ATCC 49256 RepID=Q7P5T6_FUSNV Length = 301 Score = 264 bits (674), Expect = 2e-69, Method: Composition-based stats. Identities = 99/267 (37%), Positives = 150/267 (56%), Gaps = 10/267 (3%) Query: 6 PIAKADLQKTQGNRAPAAVKNSDVISFINQ-PSMKEQLAAALPRHMTAERMIRIATTEIR 64 AK L T N A K + + + + +Q A ALP+H+ ++R +RIA T IR Sbjct: 4 TTAKNSL--TTNNGATVTKKENKQKTIFDVIQAGAKQFATALPKHINSDRFVRIAITTIR 61 Query: 65 KVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGM 124 P L C S + A++ +QLGLEPG+ LG YL+PF NK K+G Q IGY+G+ Sbjct: 62 LNPKLAKCSQESLLGALMVSAQLGLEPGT-LGQCYLIPFENK--KAGTVECQFQIGYKGL 118 Query: 125 IDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGT 184 I+L RRSGQ++ + + V E D+F+ E+GL L+H+P + + YAVA LKDG Sbjct: 119 IELLRRSGQLSDIYSYTVYENDDFNIEYGLSRTLVHKPNFTDRGEIKGFYAVAILKDGAK 178 Query: 185 QFEVMTRKQIELVRSLSK--AGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMD 242 FE MT+ ++ + + N W ++EEMA+KT +++L K+LPVS+E + D Sbjct: 179 AFEYMTKDEVVKHEEKYRKGSYKNDVWNKNFEEMAQKTVVKKLLKWLPVSVEFLEMAAKD 238 Query: 243 EKEPLTIDPADSSVLTGEYSVIDNSEE 269 EK +D D S E +++N+ + Sbjct: 239 EKSFKVVD--DKSTEVQEIEILENNGD 263 >UniRef50_UPI00016C62AB recombination and repair protein RecT n=1 Tax=Clostridium difficile ATCC 43255 RepID=UPI00016C62AB Length = 277 Score = 261 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 102/273 (37%), Positives = 157/273 (57%), Gaps = 17/273 (6%) Query: 4 QPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEI 63 AK L+K V S + + M Q+ ALP +++ER R+A T Sbjct: 2 ASEKAKGALEKKVSGANTVKVSPSKGMEQLMN-KMASQIKKALPSMVSSERFQRVALTAF 60 Query: 64 RKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRG 123 P L +C+ MSF++A+++ +QLGLEP + LG AYL+P+GNK VQ IGY+G Sbjct: 61 SNNPRLQSCEPMSFIAAMMESAQLGLEPNTPLGQAYLIPYGNK--------VQFQIGYKG 112 Query: 124 MIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGEN-EDAPVTHVYAVARLKDG 182 +++LA+RSG+I ++ A +RE D+F ++GL + L+H P N + + YAV L G Sbjct: 113 LLELAQRSGKIKTIYAHKIRENDKFEIKYGLHQDLVHEPKLNGDRGEIIGYYAVYHLDTG 172 Query: 183 GTQFEVMTRKQ-IELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSM 241 G F MT+++ IE +S SK+ ++GPW T ++ MAKKT I++L KY P+SIE+Q+A+ Sbjct: 173 GHSFSFMTKEEIIEFAKSKSKSYSSGPWQTDFDSMAKKTVIKQLLKYAPLSIELQKAMVG 232 Query: 242 DEKEPLTIDPADSSVLT------GEYSVIDNSE 268 DE ID S V+ ++ V +N + Sbjct: 233 DETIKSEIDEDMSMVVDESESLEVDFEVKENMD 265 >UniRef50_Q38143 35 protein n=1 Tax=Bacillus phage SPP1 RepID=Q38143_BPSPP Length = 287 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 100/279 (35%), Positives = 159/279 (56%), Gaps = 17/279 (6%) Query: 2 TKQPPIAKADLQKTQGNRAPAAVKNS-DVISFINQPSMKEQLAAALPRHMTAERMIRIAT 60 TK+ K L + G VK V ++ + M + LP+H+ A+R+ RIA Sbjct: 3 TKKQEELKNALAQQNGAVPQTPVKPQDKVKGYLER--MMPAIKDVLPKHLDADRLSRIAM 60 Query: 61 TEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIG 120 IR P L CDT S + A+++ ++LG+EPG LG AY+LP+ N +K+ Q I+G Sbjct: 61 NVIRTNPKLLECDTASLMGAVLESAKLGVEPG-LLGQAYILPYTNYKKKT--VEAQFILG 117 Query: 121 YRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGE--NEDAPVTHVYAVAR 178 Y+G++DL RRSG ++++SA+ V + D F +E+GLD+KL+HRP + YAVA+ Sbjct: 118 YKGLLDLVRRSGHVSTISAQTVYKNDTFEYEYGLDDKLVHRPAPFGTDRGEPVGYYAVAK 177 Query: 179 LKDGGTQFEVMTRKQIELVRS-LSKAGN-----NGPWVTHWEEMAKKTAIRRLFKYLPVS 232 +KDGG F VM+++ +E R SK+ N GPW H++ MAKKT +R+L YLP+S Sbjct: 178 MKDGGYNFLVMSKQDVEKHRDAFSKSKNREGVVYGPWADHFDAMAKKTVLRQLINYLPIS 237 Query: 233 IEIQRAVSMDEKEPLTIDP---ADSSVLTGEYSVIDNSE 268 +E V+ DE+ + D +++ + + + + Sbjct: 238 VEQLSGVAADERTGSELHNQFADDDNIINVDINTGEIID 276 >UniRef50_A7VTD0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTD0_9CLOT Length = 276 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 96/265 (36%), Positives = 135/265 (50%), Gaps = 10/265 (3%) Query: 11 DLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALG 70 +QK N+ A D M+ ++ ALP MT ER RI + + P LG Sbjct: 3 SIQKNVENQELARKAPHDSTMQNYIKKMEGEIKKALPSVMTPERFTRITLSALSTNPKLG 62 Query: 71 NCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARR 130 SF+ A++ +QLGLEP + LG AYL+PF N K + Q IGY+G+IDLA R Sbjct: 63 ETTPNSFLGAMMTAAQLGLEPNTPLGQAYLIPFYN--GKKKQLECQFQIGYKGLIDLAYR 120 Query: 131 SGQIASLSARVVREGDEFSFEFGLDEKLIHRPGEN-EDAPVTHVYAVARLKDGGTQFEVM 189 SG+I+S+ A V E DEF F FGL+ KL H P + + YA ++KDGG FEVM Sbjct: 121 SGEISSIQAHTVYENDEFEFAFGLEPKLKHVPYKGTDKGEPAWFYAAFKMKDGGFGFEVM 180 Query: 190 TRKQIELV---RSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEP 246 + + S S +G+ PW T +EEMAKKT +++ KY P+ + RA + DE Sbjct: 181 SVDDVRAHANKYSQSYSGDYSPWKTAFEEMAKKTVLKKALKYAPMKSDFVRASNSDETIK 240 Query: 247 LTIDPA----DSSVLTGEYSVIDNS 267 + ++ E +D Sbjct: 241 TELSDDMFSVPPEIIEAEGVEVDAE 265 >UniRef50_C0W9K5 Recombination and repair protein recT n=1 Tax=Acidaminococcus sp. D21 RepID=C0W9K5_9FIRM Length = 290 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 103/253 (40%), Positives = 139/253 (54%), Gaps = 10/253 (3%) Query: 19 RAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFV 78 +A K + I SM+ Q+ AALP +T ER R+ T + P L C SF+ Sbjct: 12 QAGVQTKVHSIKDLI--RSMEPQIKAALPSILTPERFTRMVLTALSSNPKLQECSPQSFL 69 Query: 79 SAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLS 138 A++Q +QLG+EP + LG AYL+P+ N G Q +GY+G+IDLA RSG I +S Sbjct: 70 GAMMQAAQLGVEPNTPLGQAYLIPYRN----HGILECQFQLGYKGLIDLAYRSGSIRDIS 125 Query: 139 ARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVR 198 A VV GD F FE+G + KLIH+P + YAV KDGG F VM+++ IE R Sbjct: 126 AHVVYSGDGFEFEYGFEPKLIHKPAMTDRGTPIAYYAVYHTKDGGGNFVVMSQEDIEKHR 185 Query: 199 -SLSKAGNN--GPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSS 255 SKA PW T++EEMAKKT +++L KY P+ E RAV+ DE I P D + Sbjct: 186 NKFSKAAGQGFSPWGTNFEEMAKKTVLKKLLKYAPLKTEFVRAVATDETVKSNIMP-DMA 244 Query: 256 VLTGEYSVIDNSE 268 E + +E Sbjct: 245 DQPNEMDYAEAAE 257 >UniRef50_C3WEC1 RecT protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEC1_FUSMR Length = 327 Score = 249 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 95/265 (35%), Positives = 137/265 (51%), Gaps = 14/265 (5%) Query: 8 AKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVP 67 A L K N + I ++Q AAALP+H+ +ER RIA T IR+ P Sbjct: 7 ATNSLVKGSNGAVTEKKPNKTIYEIIKAG--EKQFAAALPKHLNSERFTRIAITTIRQNP 64 Query: 68 ALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDL 127 L C+ S + +++ +QLGLEPG LG YL+PF KN K G Q +GY+GMI+L Sbjct: 65 KLAECNAESLLGSLMTIAQLGLEPG-VLGQCYLIPF--KNNKLGTIECQFQLGYKGMIEL 121 Query: 128 ARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENE---DAPVTHVYAVARLKDGGT 184 RR+GQ++ + A V DEF E+GLD L H+P + Y+VA LKDG Sbjct: 122 LRRTGQLSDIYAYTVYSNDEFDIEYGLDRTLKHKPAFTNPEGRGEIVGFYSVAILKDGTR 181 Query: 185 QFEVMTRKQIELVRSLSKAGNNGP--WVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMD 242 FE MT+K++ + GN W ++EEM+ KT +++ K+LP+S+E+ + D Sbjct: 182 AFEYMTKKEVIEHEEKYRKGNFKNEIWNKNFEEMSLKTVTKKMLKWLPISVEMIENLRKD 241 Query: 243 EKEPLTIDPADSSVLTGEYSVIDNS 267 E+ I D ID + Sbjct: 242 EQ----IHKLDEKTNEVTSEYIDEN 262 >UniRef50_B2JU71 RecT protein n=1 Tax=Burkholderia phymatum STM815 RepID=B2JU71_BURP8 Length = 351 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 99/280 (35%), Positives = 157/280 (56%), Gaps = 19/280 (6%) Query: 7 IAKADLQ--KTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRH-MTAERMIRIATTEI 63 +A +++ K + PA +K ++++ + + K+ +AA LP +T +R+ ++A Sbjct: 1 MATTNIKDLKPKPPVDPATLKPKELLAHMLERKRKD-IAAMLPSGPLTVDRLFKLAIVAA 59 Query: 64 RKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKN-----VQLI 118 PAL C+ S V+A+ C+QLGLEP + LGHAYL+PF K + VQ+I Sbjct: 60 TTTPALAKCEIASVVAAVGFCAQLGLEPNTPLGHAYLVPFNTKRKDGNGNEYWVNSVQVI 119 Query: 119 IGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVAR 178 IGYRG I+LARRSGQI S++A VRE D+F++ +GL EKL H P + + YAVA Sbjct: 120 IGYRGYIELARRSGQIVSITAHEVREKDKFTYAYGLREKLDHIPARGDRGEIIGFYAVAM 179 Query: 179 LKDGGTQFEVMTRKQIELVRSLSKAGNNG---------PWVTHWEEMAKKTAIRRLFKYL 229 K GG FE M QI +R S+ PW H+ EM +K+AIRR+ K+L Sbjct: 180 FKGGGHAFEFMDVAQINEIRDGSQGWQQAQKYKKTATHPWQKHFVEMGRKSAIRRIAKFL 239 Query: 230 PVSIEIQRAVSMDEKEPLTIDP-ADSSVLTGEYSVIDNSE 268 P+++++ +A + D + D + + G++S + + + Sbjct: 240 PLTVQLTQAFAADGRTINDAPQLNDPNTIDGDFSWVPDGD 279 >UniRef50_C3KZR3 RecT n=1 Tax=Clostridium botulinum Ba4 str. 657 RepID=C3KZR3_CLOB6 Length = 294 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 95/272 (34%), Positives = 146/272 (53%), Gaps = 19/272 (6%) Query: 10 ADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPAL 69 A+ Q TQ + K + + M ++ A+ + MT ER RIA + P Sbjct: 10 ANKQATQNIQLTPQKKMQNAL-----EKMLPEIKKAVGKTMTPERFSRIALSLFNGNPQF 64 Query: 70 GNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLAR 129 DT SF+SA++Q +Q GLEP + LG AY++P+ KN K G V +GY+G++ +A Sbjct: 65 WEADTTSFLSALMQSAQCGLEPNTVLGEAYVIPY--KNNKQGITEVNFQVGYKGILKMAF 122 Query: 130 RSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVM 189 +G+ ++ A VR+GDEF +E+GL + L+H+P + VTH YAV +LK+GG F V Sbjct: 123 NTGEYEAIYAHEVRKGDEFEYEYGLHKTLVHKPADIPSDEVTHYYAVYKLKNGGFDFVVW 182 Query: 190 TRKQIELV-RSLSKAG-------NNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSM 241 +R+++E R SK N W +++ MAKKT + + KY P S+E+ +A+ M Sbjct: 183 SRERVEHHAREFSKNYTYKGNVNKNSVWAKNFDSMAKKTVLLDVLKYAPKSVEMAKALDM 242 Query: 242 DE----KEPLTIDPADSSVLTGEYSVIDNSEE 269 D KE + V T E + ID E+ Sbjct: 243 DYKAEAKEEKLNNFNYVDVDTVEVNNIDTEED 274 >UniRef50_C2CG07 Recombination and repair protein RecT n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CG07_9FIRM Length = 297 Score = 235 bits (600), Expect = 9e-61, Method: Composition-based stats. Identities = 85/261 (32%), Positives = 136/261 (52%), Gaps = 17/261 (6%) Query: 8 AKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVP 67 AK L+K N+ PA K V + SMK ++ ALP ++ E+ +R A T I P Sbjct: 4 AKNALKKNTQNK-PALSKQDTVRGLL--MSMKGEIQNALPSYLPVEKFVRTALTAINSNP 60 Query: 68 ALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDL 127 L NC S ++AI+ +QLGLE + LG AYL+P+G+ V IGY+G++ L Sbjct: 61 KLANCTQQSLLAAIMNSAQLGLEFNTPLGEAYLIPYGST--------VNFQIGYKGLLKL 112 Query: 128 ARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPG-ENEDAPVTHVYAVARLKDGGTQF 186 A +GQ ++AR VR ++F+ ++G E + H+P + V YA+ + KDGG Sbjct: 113 AYNTGQFKRITAREVRGNEDFAIDYGTGE-ISHKPCLTGDSGEVIGYYAIYQTKDGGQDV 171 Query: 187 EVMTRKQIELV-RSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQ---RAVSMD 242 M++ E ++ SK+ +GPW T ++ MAKK+ + ++ KY P +IE Q +A+S D Sbjct: 172 FYMSKADAERYGKTYSKSFYSGPWKTDFDSMAKKSCLIQVLKYAPKAIESQGLIQAMSFD 231 Query: 243 EKEPLTIDPADSSVLTGEYSV 263 + + + Sbjct: 232 NANFTGSQKTVDNHYDFDVNY 252 >UniRef50_C0ZFI5 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZFI5_BREBN Length = 314 Score = 234 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 91/308 (29%), Positives = 145/308 (47%), Gaps = 43/308 (13%) Query: 1 MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIAT 60 M++ + ++ L R +N + + + + + +P+HMT ER+ RI Sbjct: 1 MSEAKTVNQSALAGQLAQRTMTKAENFNAVIKKELADNFQAIKSLVPKHMTPERLARITL 60 Query: 61 TEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIG 120 T I + PAL +C S V A++ C+ LGLEP +GHAYL+PF KN ++ + Q IG Sbjct: 61 TAISRTPALIDCTPASIVGAVMNCATLGLEPN-LIGHAYLVPF--KNNRTKQMECQFQIG 117 Query: 121 YRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGE---------------- 164 Y+G IDL RR+G ++ + A V E D F + G D++L+H P + Sbjct: 118 YKGQIDLIRRTGDVSKIYAETVYENDLFIYIKGEDKRLVHVPFDMLHHLENFTPSKDDFM 177 Query: 165 ----------------NEDAPVTHVYAVARLKDGGTQFEVMTRKQIELV-RSLSKAGNN- 206 N+ Y+ RLKDG F MT +Q + + S A + Sbjct: 178 DIMMAQAIGAIKSRGANDQGKPVRYYSAYRLKDGAFDFVTMTAEQCQKHAMTHSAAKKDG 237 Query: 207 ---GPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKE---PLTIDPADSSVLTGE 260 GPW H+E M KKT I+ + KY+P+SIE+Q +S DE ++ + Sbjct: 238 KLVGPWKDHFESMCKKTCIKEMAKYMPISIEVQEKLSTDEAVLKLRKDNGIESDNIFDVD 297 Query: 261 YSVIDNSE 268 Y +++ + Sbjct: 298 YKIVEEGQ 305 >UniRef50_C9AMX6 Recombinase n=11 Tax=Enterococcus faecium RepID=C9AMX6_ENTFC Length = 312 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 73/274 (26%), Positives = 123/274 (44%), Gaps = 14/274 (5%) Query: 7 IAKADLQKTQ---GNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEI 63 +A + K Q + A + + +N P+M+++ L H A + T + Sbjct: 1 MATNESLKNQLAEKPQKQVAPGQLGLKALMNTPTMRKKFEEVL--HDNANAFMSNVMTLV 58 Query: 64 RKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKN--VQLIIGY 121 L + + MS +S + + L L LG+AYL+PF +KN+++GK Q ++GY Sbjct: 59 SNDNYLADSEPMSIMSGALTAATLNLGLDKNLGYAYLVPFNSKNKQTGKWEKKAQFMLGY 118 Query: 122 RGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKD 181 +G I LA+RSG+ +L+ V EG+ S+ L E+ P V L + Sbjct: 119 KGYIQLAQRSGKYKALNVIEVYEGELKSWNR-LTEEFEFDPNGRTSDEVIGYVGYFELLN 177 Query: 182 GGTQFEVMTRKQIELVR-----SLSKAGNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIEI 235 G + T+++IE R K +G W + + MA+KT +R L K+ +SIE+ Sbjct: 178 GFKKTVYWTKQEIEAHRIGNNKDRDKTKLSGVWASDYNAMARKTVLRNLLSKWGILSIEM 237 Query: 236 QRAVSMDEKEPLTIDPADSSVLTGEYSVIDNSEE 269 Q A + DE+ + T I +E Sbjct: 238 QEATTSDERVQRVQEDGSIIAETEVEEDIPERKE 271 >UniRef50_C4VG97 RecT family protein n=19 Tax=root RepID=C4VG97_ENTFA Length = 297 Score = 231 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 17/272 (6%) Query: 7 IAKADLQKTQ---GNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEI 63 +A + K Q N+ + +N P+MK + L H A + T + Sbjct: 1 MATNETLKNQLSQQNQKQVPANQLGLKGLMNTPTMKRKFEEVL--HENANAFMSNVMTLV 58 Query: 64 RKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKN--VQLIIGY 121 L + MS +S + + L L LG+AYL+PF KN+++GK Q I+GY Sbjct: 59 SNDSYLAESEPMSILSGALTAATLNLGLDKNLGYAYLVPFNTKNKQTGKWERKAQFILGY 118 Query: 122 RGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKD 181 +G I LA+RSG+ +L+ V EG+ S+ L E+ P + V L + Sbjct: 119 KGYIQLAQRSGKYKALNVIEVYEGELLSWNR-LTEEFEFDPNGRQSDDVIGYVGYFELLN 177 Query: 182 GGTQFEVMTRKQIELVR-----SLSKAGNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIEI 235 G + T+++IE R K +G W T + MA+KT +R + K+ +SIE+ Sbjct: 178 GFKKTVYWTKQEIEAHRIANSKDKEKTKLSGVWATDYNAMARKTVLRNMLSKWGILSIEM 237 Query: 236 QRAVSMDEKEPLTIDPADSSVLTGEYSVIDNS 267 Q A + DEK + + + E V +N+ Sbjct: 238 QEATTSDEKVQQMQEDGN---IISETEVEENT 266 >UniRef50_C5V0B4 RecT protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0B4_9PROT Length = 350 Score = 226 bits (576), Expect = 6e-58, Method: Composition-based stats. Identities = 94/271 (34%), Positives = 138/271 (50%), Gaps = 28/271 (10%) Query: 14 KTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCD 73 + N A + + + + Q K ++ ALP+H+ +RM+RIA T R P L +CD Sbjct: 10 RNTNNNAGKSEQQQGFPAMLEQ--FKGEITRALPKHINPDRMVRIALTAFRMTPKLADCD 67 Query: 74 TMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQ 133 S +A++Q SQLGLE G +G A+L+PFG QLI GY G++ LAR+SG Sbjct: 68 PRSVFAAVIQSSQLGLEVG-LMGEAHLVPFGG--------QCQLIPGYTGLMKLARQSGL 118 Query: 134 IASLSARVVREGDEFSFEFGLDEKLIHRP---------GENEDAPVTHVYAVARLKDGGT 184 + + A VR D+F+ + G++ L H P + E V YAV LKDG Sbjct: 119 VIDIYAEAVRINDKFALKLGMERNLEHEPLTAPGGFPASDEERGDVVGFYAVGVLKDGSR 178 Query: 185 QFEVMTRKQIELVRSLS-------KAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQR 237 F M RK++E +R S K W T + M KTAIRR+ K+LP S E+ Sbjct: 179 TFVAMGRKEVERIRDGSRGYQAAKKYKKESTWDTDFVAMGLKTAIRRICKFLPKSPELAT 238 Query: 238 AVSMDEKEPLTIDPADSSVLTGEYSVIDNSE 268 A++MDE+ D V+ G Y+ + + + Sbjct: 239 ALAMDEQAGRQNLNLD-DVINGSYTPVVDED 268 >UniRef50_B3WCF3 RecT protein n=2 Tax=Lactobacillus casei group RepID=B3WCF3_LACCB Length = 295 Score = 226 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 75/275 (27%), Positives = 129/275 (46%), Gaps = 17/275 (6%) Query: 7 IAKADLQKTQGNRAPAAVKNSD---VISFINQPSMKEQLAAALPRHMTAERMIRIATTEI 63 +A LQK + A K+S V ++ P+M+++ L + +A++ + Sbjct: 1 MATTSLQKQLNEVSQAKGKSSAGSVVKDLLSAPAMQKRFNEVLGK--SAQQFTSSIINVV 58 Query: 64 RKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGK--KNVQLIIGY 121 L D MS +S+ + + L L LG+ Y++PF K++ +GK K Q +GY Sbjct: 59 NSSQQLQGVDAMSVISSAMVAATLNLPIDPNLGYMYIVPFNEKDKATGKYLKRAQPQMGY 118 Query: 122 RGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKD 181 RG I LA R+GQ S++AR V EG+ +++ + GE V L + Sbjct: 119 RGYIQLALRTGQYKSINARAVHEGEITNWDP---FSETYERGEKTSDKVVGYVGHFELLN 175 Query: 182 GGTQFEVMTRKQIELVRS-LSKAGN-----NGPWVTHWEEMAKKTAIRRLF-KYLPVSIE 234 G + T ++++ R SK+GN +G W ++++ MA KT IR L K+ +SI+ Sbjct: 176 GFQKTTYWTVEEMDQHRKLYSKSGNYNGQRSGVWKSNFDAMATKTVIRDLLSKWGILSIQ 235 Query: 235 IQRAVSMDEKEPLTIDPADSSVLTGEYSVIDNSEE 269 +Q AV DEK + +++ +E Sbjct: 236 MQDAVVKDEKPQVYDAETGELSTDPKWASNATEDE 270 >UniRef50_A0QB14 YqaK protein n=4 Tax=root RepID=A0QB14_MYCA1 Length = 370 Score = 226 bits (575), Expect = 9e-58, Method: Composition-based stats. Identities = 96/267 (35%), Positives = 139/267 (52%), Gaps = 20/267 (7%) Query: 14 KTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCD 73 K R A + + + I Q M++Q A+PR + A +++R A T ++ P L C+ Sbjct: 7 KPVAQRRTVAQAENSLQNKIRQ--MEQQFQLAMPRGVEAVQLVRDALTCLQSNPKLAECE 64 Query: 74 TMSFVSAIVQCSQLGLEPG-SALGHAYLLPFGNK-----NEKSGKKNVQLIIGYRGMIDL 127 S + A++ C+QLGL PG S LG AYLLPF +K N G QL+IGY+G ++L Sbjct: 65 HKSVLGALMTCAQLGLRPGVSVLGQAYLLPFWDKNLERPNGGKGGFRAQLVIGYQGYVEL 124 Query: 128 ARRSGQIASLSARVVREGDEFSFEFG-LDEKLIHRPG-ENEDAPVTHVYAVARLKDGGT- 184 A RSG+IASL AR V D F E+G ++K +HRP + V YAV R DGG Sbjct: 125 AYRSGRIASLHARRVYANDYFEIEYGAAEDKWVHRPYLDGPRGDVKLYYAVGRTVDGGYR 184 Query: 185 QFEVMTRKQIELVRSLSKAGNN------GPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRA 238 + ++ ++ R + GPWV H++ MA KT IR L K LP S E Q+A Sbjct: 185 ITDPVSVADMQAYRDRHATAKDRNGKVVGPWVDHFDAMADKTMIRTLMKLLPKSTEQQQA 244 Query: 239 VSMDEKEPLTIDPADSSVLTGEYSVID 265 ++ D + + P + E +D Sbjct: 245 IAHDGGVRVDVTP---DAINTEPDYVD 268 >UniRef50_P45908 Uncharacterized protein yqaK n=15 Tax=root RepID=YQAK_BACSU Length = 284 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 66/266 (24%), Positives = 121/266 (45%), Gaps = 18/266 (6%) Query: 9 KADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPA 68 K ++QK Q N P + + + ++ PS+ ++ L + A + + Sbjct: 8 KNNIQKKQKN-VPVQQQGATMKGLLSSPSVIKRFEEVLGKR--ATQFTASILSLYNSEQM 64 Query: 69 LGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLA 128 L D MS +S+ + + L L LG+A+++P+G K Q +GY+G I LA Sbjct: 65 LQKTDPMSVISSAMVAATLDLPIDKNLGYAWIVPYGGK--------AQFQLGYKGYIQLA 116 Query: 129 RRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEV 188 R+GQ S++ + EG+ + L E++ + E V A L +G + Sbjct: 117 LRTGQYKSINCIPIHEGELQKWNP-LTEEIEIDFEKRESDAVIGYAAYFELINGFRKTVY 175 Query: 189 MTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDEKEPL 247 T+ Q+E + + G W W+ MA KT ++ + K+ +S+E+Q+AV +++ Sbjct: 176 WTKAQVEKHKKKFSKSDFG-WKNDWDAMALKTVLKAVLSKWGILSVEMQKAVIEEDETRE 234 Query: 248 TID----PADSSVLTGEYSVIDNSEE 269 ID S ++ E S D +E+ Sbjct: 235 RIDITNEADSSEIIDSEPSNKDETEK 260 >UniRef50_B3WDD8 RecT protein n=3 Tax=Lactobacillus casei group RepID=B3WDD8_LACCB Length = 287 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 71/252 (28%), Positives = 120/252 (47%), Gaps = 21/252 (8%) Query: 25 KNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQC 84 K V I ++K + AA L + A + + + + P+L D +S +++ + Sbjct: 8 KKMPVKKLIETQTIKNKFAALLDKR--APQFLSSIASAVSLNPSLARVDQLSVINSALVA 65 Query: 85 SQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVRE 144 + L L +LG Y++P+ N Q IGY+G I LA+RSG+ L+A + E Sbjct: 66 ATLDLPVNPSLGFVYIVPYKN--------QAQPQIGYKGYIQLAQRSGRYQRLTALPIYE 117 Query: 145 GDEFSFEFGLDEKLIHRPGENEDA---PVTHVYAVARLKDGGTQFEVMTRKQIELVRSL- 200 DEF L E+L + P ++ A +L +G + T +Q++ R Sbjct: 118 -DEFKSWNPLTEELEYTPNFHDRKASEKPVGYAASFKLTNGFEKMVYWTYQQVDDHRKRF 176 Query: 201 SKAGNN----GPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDEKEPLTIDPADSS 255 SK+G + G W ++E MA KT I+ L K+ P++ ++Q AVS DEK DP Sbjct: 177 SKSGGSAEPKGVWKDNYEAMALKTVIKSLLTKWGPMTTDMQSAVSADEKPV-EADPELKD 235 Query: 256 VLTGEYSVIDNS 267 V + + I+++ Sbjct: 236 VTPEDPNSIEDA 247 >UniRef50_C0A3T3 Recombinational DNA repair protein (RecE pathway)-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A3T3_9BACT Length = 471 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 77/243 (31%), Positives = 117/243 (48%), Gaps = 13/243 (5%) Query: 22 AAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAI 81 ++ +P+ +E++ A +P M+ +R R+ T+ I + P L NC+ +SF + + Sbjct: 6 TTAPQERALTVWAKPTTQEKIKALVPATMSFDRFARLTTSLIHRNPELANCEPVSFFACL 65 Query: 82 VQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARV 141 C+ +G+ P G AYL+P N K K L++GY+G+ +A RS I + V Sbjct: 66 SDCATIGVYPDPVTGQAYLIPRWN--SKKQIKECTLLVGYKGLRTIALRSPDIVDIWTGV 123 Query: 142 VREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLS 201 VR GD +++IH P +E V Y+ + L+ GGT +E M + VR + Sbjct: 124 VRVGDTLKLIKAPRQEIIHEPLPDEAGEVIGYYSCSSLRGGGTSYEWMPVATVRKVRDEA 183 Query: 202 KAG-------NNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAV----SMDEKEPLTID 250 A PWVT EEM +KT +RR FK LP+ E Q AV D K Sbjct: 184 LAKIKEDWKREQSPWVTWEEEMGRKTVLRRHFKSLPLRPEDQEAVQRELDDDLKNVTGTA 243 Query: 251 PAD 253 P D Sbjct: 244 PED 246 >UniRef50_Q2G4T8 Rect protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G4T8_NOVAD Length = 294 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 89/245 (36%), Positives = 125/245 (51%), Gaps = 14/245 (5%) Query: 20 APAAVKNSDVISFI-NQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFV 78 A AA +NS V N +M + AALP H+T E+ R+A T I P L D S Sbjct: 2 ASAARENSPVAVVKQNLTAMAPEFRAALPAHVTVEKFTRVAQTAILSNPNLMRADRASLF 61 Query: 79 SAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLS 138 +I + +Q GL P A L+ FG + VQ + G++ R+SG++A +S Sbjct: 62 GSITKLAQDGLLPDGR--EAALVMFG--------QQVQAMPMIAGVLKKIRQSGEVAKIS 111 Query: 139 ARVVREGDEFSFEFGLDEKLIHRPGE--NEDAPVTHVYAVARLKDGGTQFEVMTRKQIEL 196 A+VV E D F +G DE + H P YA A LKDG EVM+ ++I+ Sbjct: 112 AQVVHENDHFVVSYGFDEDVTHNPPPLDKPRGKAIGAYATAVLKDGSRMLEVMSLEEIDK 171 Query: 197 VRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAV-SMDEKEPLTIDPADSS 255 VR++S+AG +GPWV W EMA+KT +RRL K LP+S +++ V S D+ P Sbjct: 172 VRAVSRAGKSGPWVQWWGEMARKTVMRRLSKRLPMSTDLEEEVFSRDDTMTTEFRPTLIE 231 Query: 256 VLTGE 260 E Sbjct: 232 GDAQE 236 >UniRef50_Q4QKZ2 Predicted recombinational DNA repair protein, RecE pathway n=12 Tax=Pasteurellaceae RepID=Q4QKZ2_HAEI8 Length = 306 Score = 213 bits (542), Expect = 6e-54, Method: Composition-based stats. Identities = 65/265 (24%), Positives = 105/265 (39%), Gaps = 21/265 (7%) Query: 9 KADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPA 68 +Q Q + PA + +F +++ ++ + + A Sbjct: 2 TNQVQHQQNKQPPA------LKTFFESANVQNKIKELVGK--NAATFATSVMQIANSNAM 53 Query: 69 LGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLA 128 L D MS +A + L L + LG AY++PF +N K K Q IGY+G I LA Sbjct: 54 LKTADPMSIFNAACMAATLNLPLQNGLGFAYIVPF--RNNKEKKTEAQFQIGYKGFIQLA 111 Query: 129 RRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEV 188 +RSGQ L A V + +F + ++ YA +L + + Sbjct: 112 QRSGQFKRLVALPVYKKQLIKKDFINGFEFDWEQEPEQNENPIGYYAYFKLVNDFSAELY 171 Query: 189 MTRKQIELV---RSLSKAGNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDEK 244 M+ I S + G W ++E MA KT + L K P+S+E+Q+AV D+ Sbjct: 172 MSHDDIVKHAQRYSQTFKKGYGVWHDNFEAMALKTVTKLLLSKQAPLSVEMQQAVLADQA 231 Query: 245 EPLTIDPADSSVLTGEYSVIDNSEE 269 V E++ DN +E Sbjct: 232 VVK-------DVENQEFNYTDNIQE 249 >UniRef50_B1KTX5 RecT family protein n=2 Tax=Clostridium botulinum RepID=B1KTX5_CLOBM Length = 306 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 11/252 (4%) Query: 24 VKNSDVISFINQPS---MKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSA 80 K +V S + +KE+L L + + + P L C+ M+ +S+ Sbjct: 5 AKVENVKSILESSKGIQIKERLNEILGK--KTPGFVSSMIN-VSNSPTLKECEPMTVISS 61 Query: 81 IVQCSQLGLEPGSALGHAYLLPFGNKNEKSGK--KNVQLIIGYRGMIDLARRSGQIASLS 138 V + L L +G AY++P+ K++K+GK K Q +GYRG + LA R+ Q +++ Sbjct: 62 AVVAATLDLPIDPNIGFAYVVPYNCKDKKTGKWIKKAQFQLGYRGYVQLALRTSQYKNIN 121 Query: 139 ARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQI-ELV 197 V G S+ L E+L E V +L +G + ++ + Sbjct: 122 VVEVYRGQLASWNP-LTEELQFDFDNKESDEVIGYAGFFKLTNGFEKVVYWKKEDVLNHA 180 Query: 198 RSLSKAGNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDEKEPLTIDPADSSV 256 + SK ++GPW ++ MAKKT ++ + K+ +SIE+Q + D+ S Sbjct: 181 KKYSKTFSSGPWKDDFDSMAKKTVLKDMIKKWGILSIEMQTGIKADQAVIKEGIVNKDSG 240 Query: 257 LTGEYSVIDNSE 268 L +DN + Sbjct: 241 LDENIDYVDNPQ 252 >UniRef50_C5WGX9 RecT protein n=7 Tax=Streptococcus RepID=C5WGX9_STRDG Length = 308 Score = 209 bits (532), Expect = 7e-53, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 116/246 (47%), Gaps = 16/246 (6%) Query: 23 AVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIV 82 + F N P++++ T + + ++ +L + S +A + Sbjct: 4 QLSTYTHKQFFNAPTIQKAFDDVWKGAGT--QFAVSILSVLQGSQSLKSASNESIYAAAM 61 Query: 83 QCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVV 142 + + L L +LG AYL+P+ Q +GY+G+I+LA+RSGQ +++A +V Sbjct: 62 KAAVLNLPIEPSLGRAYLVPYKG--------QAQFQLGYKGLIELAQRSGQYKNINAGIV 113 Query: 143 REGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELV-RSLS 201 + S+ +E L+ + +A +L +G + T +++ + S Sbjct: 114 YKSQLISYNPLFEELLL--DFSKPQDEIVGYFAAFKLLNGFEKVSFWTVEKVTAHGKKFS 171 Query: 202 KAGNNGPWVTHWEEMAKKTAIRR-LFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGE 260 K+ +GPW T ++ MA+KT ++ L KY P+S+E+Q+A+ D ++ P D + E Sbjct: 172 KSFASGPWKTDFDAMAQKTILKDILSKYGPLSVEMQKAIEEDNQDSTISTPKD--ITPQE 229 Query: 261 YSVIDN 266 + +D+ Sbjct: 230 ANSLDD 235 >UniRef50_B8IIR3 RecT protein n=3 Tax=Methylobacterium RepID=B8IIR3_METNO Length = 320 Score = 206 bits (525), Expect = 5e-52, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 103/205 (50%), Gaps = 10/205 (4%) Query: 23 AVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIV 82 N V+ S + + AAALP H+ ER RI T ++ P L + SF +A + Sbjct: 12 PAANPLVLVREQIQSREAEFAAALPAHIPVERFKRILLTAVQNNPDLLKLERRSFFNAAM 71 Query: 83 QCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVV 142 + +Q GL P G ++ F + Q + G+ R SG++++ A VV Sbjct: 72 RAAQDGLLPDGREG--AIVEFNGR--------AQWMPMIAGIRKKVRNSGEVSTWEANVV 121 Query: 143 REGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSK 202 E DEF ++ G D K+IHRP Y++A LK G EVMT ++IE VR +S+ Sbjct: 122 FENDEFEYQLGDDPKIIHRPALVNRGKPIAAYSIAVLKSGERSREVMTVEEIEKVRKVSR 181 Query: 203 AGNNGPWVTHWEEMAKKTAIRRLFK 227 A N GPW WEEMA+KT RR K Sbjct: 182 ARNGGPWSQWWEEMARKTVARRHSK 206 >UniRef50_D2L6Y9 RecT protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L6Y9_9DELT Length = 324 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 81/274 (29%), Positives = 122/274 (44%), Gaps = 31/274 (11%) Query: 15 TQGNRAPAAVKNSDVISFINQPSMKEQLAAALP----RHMTAERMIRIATTEIRKVPALG 70 P + V + I Q +A + R AER R+A T IR L Sbjct: 1 MSNGNLPQESGGASVAALIQQQIPAIAMAVSGGTKEERQKRAERFARVALTTIRNNDKLA 60 Query: 71 NCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARR 130 C S + A++ + L LE G AYL+P+G + QL IGY+G+ +LA R Sbjct: 61 QCRVESLLGALMTSASLNLEIDPR-GLAYLIPYG--------REAQLQIGYKGIKELAYR 111 Query: 131 SGQIASLSARVVREGDE----FSFEFGLDEKLIHR----PGENEDAPVTHVYAVARLKDG 182 +G I ++ A VV + + F+ E GL L H+ E + + YAVA ++DG Sbjct: 112 AGGIKAIYAEVVYKPEVEAGMFTIEIGLSRSLTHKLDPLRPELRNGDLVLAYAVAEMEDG 171 Query: 183 GTQFEVMTRKQIELVRSLSKAGNNGP---WVTHWEEMAKKTAIRRLFKYLPVSIE--IQR 237 F R ++E R SK P W EEM +KTA+++L K LP S E + + Sbjct: 172 RRHFAYCLRDEVEKRRKTSKMNTASPDSTWGKWAEEMWRKTAVKKLCKDLPQSTEDAMAK 231 Query: 238 AVSMDEKEPLTID-----PADSSVLTGEYSVIDN 266 AV++D++ + P D +T E + Sbjct: 232 AVALDDQAEAGVPQTFDLPKDFIDVTPEPKTASD 265 >UniRef50_C5IHJ8 Gp06 n=2 Tax=unclassified Podoviridae RepID=C5IHJ8_9CAUD Length = 342 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 19/264 (7%) Query: 13 QKTQGNRAPAAVKNSDVISFIN--QPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALG 70 ++ + PA K + I F ++ ++ ALP + +R IR T ++ P L Sbjct: 3 EQMSNEQQPAEQKPTPYIEFREKLNRGIRVEIEKALPPDIDVDRFIRTVLTSVQMNPDLL 62 Query: 71 NCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKN---------VQLIIGY 121 + S ++A ++ +Q GL P A L + K + N VQ + Sbjct: 63 YANRQSLMNACMRAAQDGLFPDGR--EAVLNIYNTKVKVRDGNNRLIEEWVPMVQYLPMV 120 Query: 122 RGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRP--GENEDAPVTHVYAVARL 179 RG++ + R SG++A++ A V D F F G D ++ H P G+++ PV Y + +L Sbjct: 121 RGILKVMRNSGEVANIDAAAVYAKDHFRFVRGDDPRIEHEPYLGDDDPGPVVAAYMIVKL 180 Query: 180 KDGGTQFEVMTRKQIELVRSLSKA--GNNGPWVTHWEEMAKKTAIRRLFKYLPVSIE-IQ 236 +G + EVM R+ IE R SK G N PW +++MA K I+R K LP S + + Sbjct: 181 SNGEVRREVMPRRDIEKTRLASKNAEGANSPWTKWYDQMAIKGVIKRGAKLLPASSDRLD 240 Query: 237 RAVSMDEKEPLTIDPADSSVLTGE 260 R + D E D + + Sbjct: 241 RVIDHDN-EASGFDAFNQRGVDAS 263 >UniRef50_A7A5B7 Putative uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A5B7_BIFAD Length = 287 Score = 203 bits (516), Expect = 5e-51, Method: Composition-based stats. Identities = 77/241 (31%), Positives = 122/241 (50%), Gaps = 16/241 (6%) Query: 40 EQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGS--ALGH 97 Q+A + ++ +E ++++ + I + PAL +C +S +S +QC+ LGL P LG Sbjct: 31 PQIARVIGGNLDSEALLQMCISSINRTPALADCTPVSVLSCFMQCAALGLRPSDVDGLGQ 90 Query: 98 AYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEK 157 AY+LP+GNKN +G+K +IGY+GM+ L SG A R V E D + + Sbjct: 91 AYILPYGNKNYATGEKQATFVIGYKGMLKLLENSGIYA--QPRAVYEDDNIKLKLDENGV 148 Query: 158 L-------IHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGN----- 205 ++ ++ + + VY +L +GG + M+++ + R N Sbjct: 149 PTIECPDEVNVDADHSEDKLKFVYLSVQLPNGGRYADYMSKRDLLEYREKYAPRNRSRQI 208 Query: 206 NGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVID 265 GPWV ++ EMAKKT IRR FKYLPV+IE ++A S+DE P D + V Sbjct: 209 TGPWVKNFVEMAKKTIIRRSFKYLPVNIEAKKAASVDETTPDYSDVFQPVITDSTDDVTA 268 Query: 266 N 266 Sbjct: 269 E 269 >UniRef50_A9BYL3 RecT protein n=3 Tax=Burkholderiales RepID=A9BYL3_DELAS Length = 307 Score = 199 bits (506), Expect = 8e-50, Method: Composition-based stats. Identities = 64/229 (27%), Positives = 100/229 (43%), Gaps = 21/229 (9%) Query: 45 ALPRHMTAERMIRIATTEIRKV---PALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLL 101 + R + ER A + L D S V+A+ + +G+ A AYL+ Sbjct: 22 LVDRSINFEREAGFAIQVLTAGDYIAKLAANDRQSVVNAVTNIAAIGISLNPAKKQAYLV 81 Query: 102 PFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIH- 160 P K + L I Y G+IDLA ++G I A +V D F+ G D H Sbjct: 82 PRKGK--------ICLDISYMGLIDLAVQAGSILWAQADLVYASDAFTLN-GFDRPPTHS 132 Query: 161 -RPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLS---KAGNNGPWVTHWEEM 216 P E + Y V + G + M+R++I+ +++ S KAG + PW T + EM Sbjct: 133 YNPFSRERGELVGAYVVVKTPSGDYLTDCMSREEIDAIKNRSESVKAGKSSPWDTDYGEM 192 Query: 217 AKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLT----IDPADSSVLTGEY 261 AKKT ++R +KY P S + +A+ E PA S+ + + Sbjct: 193 AKKTVVKRAYKYWPKSDRLDQAIHHLNTEGGEGLATAQPARSAAIDPQP 241 >UniRef50_A5MYQ8 Phage-related rekombinase protein n=2 Tax=Clostridium kluyveri RepID=A5MYQ8_CLOK5 Length = 297 Score = 199 bits (506), Expect = 8e-50, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 16/246 (6%) Query: 25 KNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQC 84 K +V + + +++++ L + A + L + S VS+ + Sbjct: 8 KPVEVKNILANVNVQKRFQEILGK--KAAGFMASLINV--SNGKLKGIEPYSVVSSAMIA 63 Query: 85 SQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVRE 144 + L L LG A+++P+ KK Q +GY+G + L R+GQ +++A + + Sbjct: 64 ATLDLPIDPNLGFAWIVPY--------KKKAQFQMGYKGFVQLGLRTGQYKNINAISIYK 115 Query: 145 GDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQ-IELVRSLSKA 203 G S+ L EK+ E V A L G ++ ++++ I + SKA Sbjct: 116 GQLKSWNP-LTEKIELNFENKESNEVIGYAAYFSLVSGFEKYVYWSKEEVITHAKRFSKA 174 Query: 204 GNNGPWVTHWEEMAKKTAIRR-LFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYS 262 N+GPW T++ MA+KT ++ L K+ +SI++Q A+ D+ D + Sbjct: 175 FNDGPWQTNFNRMAEKTVLKNTLSKWGILSIDMQLALQADQAVIKK-GVLDGEPVEVNLD 233 Query: 263 VIDNSE 268 IDN + Sbjct: 234 YIDNPD 239 >UniRef50_B3H0V7 Possible phage recombinase n=6 Tax=Proteobacteria RepID=B3H0V7_ACTP7 Length = 318 Score = 199 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 18/260 (6%) Query: 20 APAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVS 79 + + ++K++L L + A + L N D MS + Sbjct: 11 VAKKQDKFPIKTLFESQNVKQKLQELL--NKNASTFTTSVLQIVNSNSMLRNADPMSVFN 68 Query: 80 AIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSA 139 A + L L + LG AY++P+ NK E+ K Q +GY+G+I LA+RSGQ L A Sbjct: 69 AACMAATLNLPLQNGLGFAYIVPYQNKKER--KTEAQFQLGYKGLIQLAQRSGQFKRLVA 126 Query: 140 RVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELV-R 198 V E + + + + + YA +L + T MT +++ + Sbjct: 127 VPVYEKQLINEDPINGYEFDWKQKPEANEKPVGYYAYFQLVNTFTAELYMTAFEVDQHAQ 186 Query: 199 SLSKA------------GNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDEKE 245 S+ W ++E MA KT ++ L K P+S+E+Q+AV D+ Sbjct: 187 RYSQTYRTYLDKKAKGQWATSVWADNFEAMALKTVMKLLLSKQAPLSVEMQQAVLADQAV 246 Query: 246 PLTIDPADSSVLTGEYSVID 265 +D ++ S + + Sbjct: 247 VKDVDNSEFSYPDNDIQDAE 266 >UniRef50_C0CR08 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CR08_9FIRM Length = 342 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 70/289 (24%), Positives = 119/289 (41%), Gaps = 32/289 (11%) Query: 12 LQKTQGNRAPAAVKNSDV--ISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPAL 69 + + + + A K V +++ +KEQ+ + A R I + ++ L Sbjct: 1 MAENKNTQVVAQQKPVKVGITGYLSNEKVKEQIVNVVG-EKNATRFISSVVSAVQTNANL 59 Query: 70 GNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGN----------KNEKSGKKNVQLII 119 C S SA + L L P LG Y++P+ N + K Q I Sbjct: 60 QKCTNASIFSAALLGESLQLTPSPQLGQFYMVPYENNKMVTDPKTGRETKVKVNEAQFQI 119 Query: 120 GYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDE---KLIHRPGENEDAPVTHVYAV 176 GY+G I LA RSGQ + V++G+ F +E + + ++ PV Y + Sbjct: 120 GYKGYIQLAIRSGQYRKIVVSDVKDGEVGFFNPITEEFGMNPVLDMEKRQELPVVGYYGM 179 Query: 177 ARLKDGGTQFEVMTRKQIELV-RSLSKAGNN--------GPWVTHWEEMAKKTAIRRLF- 226 L +G + ++Q+E ++ SK + W +++ MAKKT IR+L Sbjct: 180 FELTNGFRKELYWPKEQMEKHAKTYSKGYASDLRKNTSYTFWTKNFDAMAKKTLIRQLIS 239 Query: 227 KYLPVSIEIQRAVSMD------EKEPLTIDPADSSVLTGEYSVIDNSEE 269 K+ +SIE+QRA D + +D V E + +NS + Sbjct: 240 KWGIMSIEMQRAYEADMGVLDEDGTVRYVDNDSDIVAEVEAEISENSNK 288 >UniRef50_Q854T9 Gp61 n=1 Tax=Mycobacterium phage Che9c RepID=Q854T9_9CAUD Length = 353 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 25/273 (9%) Query: 7 IAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRK- 65 +A+ + K +AP + + QLA A+P+ M +R+ RI TEIRK Sbjct: 1 MAENAVTKQDSPKAPETISQV-------LQVLVPQLARAVPKGMDPDRIARIVQTEIRKS 53 Query: 66 ---------VPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQ 116 +L +C SF A++ + LGLEPG G YL+P+ ++ + G Q Sbjct: 54 RNAKAAGIAKQSLDDCTQESFAGALLTSAALGLEPGVN-GECYLVPY--RDTRRGVVECQ 110 Query: 117 LIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAV 176 LIIGY+G++ L + + + + A+ V DEF + GL+ L H + + + YA+ Sbjct: 111 LIIGYQGIVKLFWQHPRASRIDAQWVGANDEFHYTMGLNPTLKHVKAKGDRGNPVYFYAI 170 Query: 177 ARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQ 236 + ++V T +I +R K G++G M +KTA++++ K P + + Sbjct: 171 VEVTGAEPLWDVFTADEIRELR-RGKVGSSGDIKDPQRWMERKTALKQVLKLAPKTTRLD 229 Query: 237 RAVSMDEKEPLTIDPAD----SSVLTGEYSVID 265 A+ D++ + + S + ID Sbjct: 230 AAIRADDRPGTDLSQSQALALPSTVKPTADYID 262 >UniRef50_A8RCV0 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=A8RCV0_9FIRM Length = 304 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 65/285 (22%), Positives = 117/285 (41%), Gaps = 34/285 (11%) Query: 16 QGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTM 75 Q N + I S+++ + L +++ + ++ + P L CD Sbjct: 4 QNNLSAQGTGKRKFSVVIQSESIQKLINNTLGDTKKSQKFVTAISSAVAVNPQLQECDGF 63 Query: 76 SFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIA 135 S V+A + L L P LGH Y++PF +KN+ K +GY+G + LA RSGQ Sbjct: 64 SIVNAALLGETLQLSPSPQLGHYYMVPFNDKNK---GKVATFELGYKGYLQLAIRSGQYK 120 Query: 136 SLSARVVREGDEFSFEFGLDE---KLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRK 192 ++ +++G+ +F+ +E LI E E A YA+ L +G + +++ Sbjct: 121 KINVLEIKKGELINFDPLNEELEINLIQDELEREKAETIGYYAMFELVNGFKKALYWSKE 180 Query: 193 QI-ELVRSLSKAGN--------------------NGPWVTHWEEMAKKTAIRRLF-KYLP 230 ++ S A N + W ++ MA KT +R+L K+ Sbjct: 181 KMLSHADKYSAAFNAKSYNDLMTGKILDKDKWKYSSFWYKDFDGMAFKTMLRQLISKWGI 240 Query: 231 VSIEIQRAVSMDEK------EPLTIDPADSSVLTGEYSVIDNSEE 269 +SIE+Q A D ++ + ++ + V EE Sbjct: 241 MSIELQAAFEGDYTFKDASGNSTYVEETNEPLINPDIEVTQVHEE 285 >UniRef50_C0YSU1 Probable RecT protein n=2 Tax=Flavobacteriaceae RepID=C0YSU1_9FLAO Length = 289 Score = 196 bits (499), Expect = 5e-49, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 108/260 (41%), Gaps = 22/260 (8%) Query: 21 PAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSA 80 +A ++ NQ +++E+ L + A+ I + L N D M+ +A Sbjct: 1 MSATNQKSALTLFNQTNVQEKFEKLLGK--KAQGFISSVLQIVNGNKLLQNADPMTVYNA 58 Query: 81 IVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSAR 140 + L L LG A+++P+ + Q +G++G + LA R+ Q +++ Sbjct: 59 AATAAVLDLPINPNLGFAWIVPYKG--------SAQFQMGWKGFVQLALRTNQYQNINTT 110 Query: 141 VVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQ-IELVRS 199 V E SF L E+L + + +LK G ++ ++++ I + Sbjct: 111 EVYENQFKSFNR-LTEELEADFDVQGEGEIVGYAGYMKLKSGFSKTTYWSKEEVITHAKK 169 Query: 200 LSKAGNN---GPWVT--HWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDEKEPLTIDPAD 253 S+A PW + MAKKT ++ L K+ +S+E+Q A D+ + D Sbjct: 170 YSQAYGKGSMSPWNDKEQFHAMAKKTVLKNLISKWGIMSVEMQNAHLADQSVQKEMGSYD 229 Query: 254 ----SSVLTGEYSVIDNSEE 269 S+ + E ++ E+ Sbjct: 230 YVDSSNTIDIEAENVNEEEK 249 >UniRef50_A9DEN8 DNA recomination protein n=1 Tax=Yersinia phage PY100 RepID=A9DEN8_9CAUD Length = 332 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 62/235 (26%), Positives = 99/235 (42%), Gaps = 17/235 (7%) Query: 37 SMKEQLAAALPRH-MTAERMIRIATTEIRKVPA---LGNCDTMSFVSAIVQCSQLGLEPG 92 S + Q A + + + A ++ + + S +AI + +G+ Sbjct: 34 SQQGQFEAVVTDDKINFVKEAGFALQILQGNNFTCGVAQRNPESLKNAITNVAAIGVSLN 93 Query: 93 SALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEF 152 A HAYL+P NV L I Y G+I++A SG I A++V D + Sbjct: 94 PAKKHAYLVPRNG--------NVCLDISYLGLINIAVESGSIKWAQAKIVYSNDTYE-NT 144 Query: 153 GLDEKLIHRPG-ENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLS---KAGNNGP 208 G+D IH+ + Y + +D M+ +I +R S K GN+ P Sbjct: 145 GVDTAPIHKYNAFGNRGEIIGAYVTVKTRDDSYLTTEMSIDEIHRIRQRSESFKKGNSSP 204 Query: 209 WVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSV 263 W T +EEM KKT I+R +K PVS + A+ M ++ ID +GE + Sbjct: 205 WKTDYEEMVKKTVIKRAYKLWPVSDRLANAIEMLNEQGEGIDFNSERKASGERVI 259 >UniRef50_Q9AZQ0 RecT n=2 Tax=root RepID=Q9AZQ0_9CAUD Length = 268 Score = 193 bits (490), Expect = 5e-48, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 20/240 (8%) Query: 33 INQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPG 92 + P +K++ L + E + + + L N D S ++A ++ + L L Sbjct: 12 LKSPEVKKKFEEVLGK--KTEGFVASLLSVV-GNSNLKNADANSVMTAAMKAATLDLPIE 68 Query: 93 SALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEF 152 +LG AY++P+G + Q IGY+G I LA RSGQ+ L+ +V E S++ Sbjct: 69 PSLGFAYVIPYG--------REAQFQIGYKGFIQLALRSGQLTGLNCGIVYESQFVSYDP 120 Query: 153 GLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTH 212 +E L + +A +L +G + +++Q+ + NGPW H Sbjct: 121 LFEE-LELDFSQQASGDAVGYFASMKLANGFKKVTYWSKEQVLAHKKKFVKSANGPWRDH 179 Query: 213 WEEMAKKTAIRRLF-KYLPVSIE---IQRAVSMDEKEPLTIDPADSSVLTGEYSVIDNSE 268 ++ MA+KT ++ + KY P SIE IQ A++ D+ E ++ +T + VI E Sbjct: 180 FDAMAQKTVLKAMLTKYAPASIESKMIQTAITEDDSER----FENAKDVTPDEPVISIDE 235 >UniRef50_C4ZCC7 RecT family protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZCC7_EUBR3 Length = 302 Score = 193 bits (490), Expect = 5e-48, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 112/283 (39%), Gaps = 30/283 (10%) Query: 9 KADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPA 68 + + QG + A + V S I+Q ++K++ L + A + + T + Sbjct: 4 QNAVATQQGTQLSVAAQ---VKSMISQDAVKKKFTEVLGQ--KAPQFLASITNVVAGSAQ 58 Query: 69 LGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNE------KSGKKNVQLIIGYR 122 L C + +SA + L S LG A ++P+ N Q + Y+ Sbjct: 59 LKKCPATTIMSAAFVAATYDLPIDSNLGFAAIVPYNNNKYNPQTRQWEKHPEAQFQMMYK 118 Query: 123 GMIDLARRSGQIASLSARVVREGDEFSFE-------FGLDEKLIHRPGENEDAPVTHVYA 175 G I LA RSG ++ VV + + S+ F D + E + + YA Sbjct: 119 GFIQLAIRSGYYEKMNCSVVYKDELVSYNPITGEVEFVTDFSKCTQRAEGKSENIAGYYA 178 Query: 176 VARLKDGGTQFEVMTRKQIE-LVRSLSKA--------GNNGPWVTHWEEMAKKTAIRRLF 226 +L G + MT ++E R S A W T +E MA KT I+ L Sbjct: 179 WFKLLTGFRKELFMTTAEVENHARKYSTAYRYDLENNKKGSKWTTDFEAMALKTVIKMLL 238 Query: 227 -KYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDNSE 268 K+ +S+++QRA+ D+K + S + +++ + Sbjct: 239 SKWGILSVDMQRAIQDDQKVYDE--DGEGSYGDNQPDIVEAQD 279 >UniRef50_C3Q0Z8 RecT family protein n=2 Tax=Bacteroides RepID=C3Q0Z8_9BACE Length = 302 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 99/240 (41%), Gaps = 15/240 (6%) Query: 37 SMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCD---TMSFVSAIVQCSQLGLEPGS 93 S K+ AA R + A + P L +C V AI S GL Sbjct: 61 SPKKAFIAAGGTEQQFAREVNFAMQAMLNNPYLIDCARQYPDHLVEAIKNVSLTGLTLNP 120 Query: 94 ALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFG 153 L YL+P+ K V+ Y G +D+ R+G + + + +V DEFS G Sbjct: 121 ELRLGYLVPYKGK--------VKFQASYMGKVDILIRTGVVKDIYSDLVYANDEFSMTKG 172 Query: 154 LDEKLIHRPG-ENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLS---KAGNNGPW 209 +IH+P E + Y A L G +F+ M + +IE ++S S K G PW Sbjct: 173 TGGTIIHKPNVFGERGDLLGGYYFAVLTSGVVKFDAMPKARIEEIKSRSEAVKKGKQSPW 232 Query: 210 VTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDNSEE 269 T +EEMA+KT + FK+LP + + + E E D + D+ EE Sbjct: 233 DTDFEEMARKTIVNWAFKFLPKTGISDSMIKVLETESQLDDEMFEDWKKAQGQKPDDFEE 292 >UniRef50_B6JI05 Rect protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JI05_OLICO Length = 461 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 72/255 (28%), Positives = 107/255 (41%), Gaps = 20/255 (7%) Query: 1 MTKQPPIAKADLQKTQ-----GNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERM 55 M K + PA N V F + LP H+ +++ Sbjct: 1 MAKTETRERTQADHRSAEPAPNVNVPAQKSNHPVAVFREYAMQRISTLQELP-HIDPQQL 59 Query: 56 IRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFG-NKNEKSGKKN 114 + +A T I++ P L C S +A V +Q GL P G ++P+G N + K + Sbjct: 60 LSVALTAIQRKPDLMRCTPQSLWNACVLAAQDGLLPDGREG--AIVPYGENADGKRVAEI 117 Query: 115 VQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRP-GENEDAP---- 169 + G+ R SGQI +V GD F + G D +L H P ++ P Sbjct: 118 ATWMPMVEGLRKKVRNSGQIKDWYVELVYAGDFFRYRKGDDPRLEHEPVPPSQRTPNTPF 177 Query: 170 --VTHVYAVARLKDGGTQF-EVMTRKQIELVRSLSKAGNNGPWVT--HWEEMAKKTAIRR 224 + Y++A DG EVM ++IE VR+ SKA N GPW + EM KK RR Sbjct: 178 HGIVAAYSIAVFTDGSKSAPEVMWIEEIEKVRTKSKAKN-GPWQDSAFYPEMCKKVVARR 236 Query: 225 LFKYLPVSIEIQRAV 239 +K LP S + + + Sbjct: 237 HYKQLPHSAGMDKLI 251 >UniRef50_C3X3A2 RecT family protein n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X3A2_OXAFO Length = 290 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 61/280 (21%), Positives = 115/280 (41%), Gaps = 42/280 (15%) Query: 18 NRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSF 77 N A ++ + +F+N +++ L + + + + P L C + Sbjct: 7 NLAETKKQDVSLAAFVNN-----KVSNIL-NGTKRDAFVTSVVSAVTINPNLSVCSRGTI 60 Query: 78 VSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASL 137 VSA +Q + L L P LGH Y++P+ +K Q +GY+G I LA RSGQ + Sbjct: 61 VSAALQGAALDLSPSPVLGHFYIVPYKDK--------AQFQLGYKGYIQLAIRSGQYRRI 112 Query: 138 SARVVREGDEFSFEF---GLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQI 194 + +REG+ + + ++I + E PV YA+ L +G + ++K++ Sbjct: 113 NVLEIREGELLGWNPFAEKISVEIIEDDEKREKLPVVGYYAMFELVNGFEKSVYWSKKKM 172 Query: 195 ELVRS--------------------LSKAGN-NGPWVTHWEEMAKKTAIRRLF-KYLPVS 232 E S+ + W +++MA KT +R L K+ +S Sbjct: 173 EQHADRYSPAFSLESFKKIQEGKIPKSEMWKYSSFWYADFDQMAFKTLLRHLISKWGVMS 232 Query: 233 IEIQRAVSMDEKEPLTI---DPADSSVLTGEYSVIDNSEE 269 I++Q A+ D D+ ++ + + E+ Sbjct: 233 IDMQSAIEKDMTIIDENGIPQYEDNDLIDLPDGSVSDVEK 272 >UniRef50_C8U7M5 Predicted DNA recombination protein Bet n=14 Tax=Enterobacteriaceae RepID=C8U7M5_ECO10 Length = 316 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 19/250 (7%) Query: 29 VISFINQPSMKEQL--AAALPRHMTAERMIRIATTEIRKVPALGN---CDTMSFVSAIVQ 83 + + +E+ A +T + + A + +K L + + S +AI+ Sbjct: 1 MFDIVEFVKQQERFFCEALTEPTLTWAKESQFAIQQFQKNAFLADTARANLPSAQNAIIN 60 Query: 84 CSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVR 143 + +G+ A AYL+P KK V L I Y G++ LA+ +G I ++V Sbjct: 61 VAAIGITLNPASKLAYLVPR--------KKAVCLDISYMGLLHLAQVTGAIQWGQCKLVY 112 Query: 144 EGDEFSFEFGLDEKLIHRPGEN-EDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSK 202 E D + G+D H+ + Y V + +G E M+ ++IE++R+ SK Sbjct: 113 EKDIYESN-GIDCAPTHKYNPFVDRGARIGGYCVVKTSEGDYLTEEMSNREIEVIRACSK 171 Query: 203 AGN---NGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTG 259 AGN + PW + +EMA+K ++R KY P + A+ + ++ + Sbjct: 172 AGNNGGSSPWDSFPDEMARKAIVKRASKYWPRRDRLDTAIDYLNTQGGEGIILNADHI-P 230 Query: 260 EYSVIDNSEE 269 E V S+E Sbjct: 231 ERDVTPASDE 240 >UniRef50_C3WER4 Putative uncharacterized protein n=2 Tax=Fusobacterium RepID=C3WER4_FUSMR Length = 333 Score = 187 bits (475), Expect = 3e-46, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 108/256 (42%), Gaps = 22/256 (8%) Query: 27 SDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQ 86 + S + ++K+QL + L A + + P L D S ++A + + Sbjct: 21 PALKSMLATQAIKKQLKSLLGER--AGHFMMAIIQVVEGTPQLQQADPQSIINAAIASAV 78 Query: 87 LGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGD 146 L L LG AY++P+ +KN+ + Q +GY+G I LA RSG+ ++A ++EG+ Sbjct: 79 LNLPIEKNLGFAYIVPYNDKNKGTL---AQFQMGYKGYIQLALRSGEYKYINAIEIKEGE 135 Query: 147 EFSFEFGLDE---KLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLS-- 201 + E K I + +A + +G MT Q++ Sbjct: 136 IQGYNILTGELNLKFIEDLDKRLEAKTVGYASYIEFNNGFRNTLFMTVGQVKNHAEKYSQ 195 Query: 202 -------KAGNNGPWVTHWEEMAKKTAIR-RLFKYLPVSIEIQRAVSMDEKEPLTIDPAD 253 K W +++ MA KT ++ L K+ +S+E+Q+A+ D + D Sbjct: 196 SYQYDLRKGYTMSNWSKNFDAMALKTVLKLNLSKFGALSVEVQKALQTDGLVVKEV--ED 253 Query: 254 SSVLTGEYSVIDNSEE 269 + G++ DN+ E Sbjct: 254 DGTIIGQF--ADNTGE 267 >UniRef50_A1U8M4 RecT protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U8M4_MARAV Length = 319 Score = 187 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 14/221 (6%) Query: 36 PSMKEQLAAALPRHMTAERMIRIATTEIRKVPAL---GNCDTMSFVSAIVQCSQLGLEPG 92 S KE+ + + ++ AT ++ L + S A+ + +GL Sbjct: 18 ESSKEKFS---GSGLDFKQEQIFATQQLMNNSYLLDVAKNNPSSLRLAMYNVAAVGLTLN 74 Query: 93 SALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEF 152 G AYL+P + + K V L I YRG+I + +G I A +V E DEF+++ Sbjct: 75 PNQGLAYLVPRRLRRNEDAK--VMLDISYRGLIAIGVETGAIRWAKAELVYENDEFTYK- 131 Query: 153 GLDEKLIHR--PGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNN--GP 208 G +K H+ P + + Y +A L GG E M++ ++ +R +S+A GP Sbjct: 132 GPADKPDHKCDPFSTDRGAIRGGYCLAELPSGGVLVEAMSKADMDKIRDVSEAFKKGFGP 191 Query: 209 WVTHWEEMAKKTAIRRLFKYLPVSI-EIQRAVSMDEKEPLT 248 WV E+M K+ ++R K+ P+S + RA+ + +E Sbjct: 192 WVDWAEQMMLKSIVKRASKWWPMSTPRMARALQILNEENGE 232 >UniRef50_Q6AC64 Phage recombination protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AC64_LEIXX Length = 261 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 64/248 (25%), Positives = 99/248 (39%), Gaps = 11/248 (4%) Query: 21 PAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSA 80 A KN + ++ + + AL M A + + A T I++ P +G+ D S A Sbjct: 1 MAVKKNPTIEDYL--IKYEPEFQRALGASMDAAKFAQDALTAIKQNPKIGHSDPRSLFGA 58 Query: 81 IVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSAR 140 + +QL L G L +L K G V I+GY G + L +G + +SA Sbjct: 59 LFLAAQLKLPVGGPLAQFHLTTRTVK----GNLTVVPIVGYGGYVQLIMNTGLYSRVSAF 114 Query: 141 VVREGDEFSF--EFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVR 198 ++ GD F E R +++ V V A A++K V + + Sbjct: 115 LIHAGDYFVTGANSERGEFYDFRRADSDRGEVKGVIAYAKVKGHNESSWVYIDAETMRAK 174 Query: 199 SLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIE---IQRAVSMDEKEPLTIDPADSS 255 K + PW EM KKT IR L KYLP S+E + A S D+ +D Sbjct: 175 HRPKYWESTPWADDAGEMFKKTGIRVLQKYLPKSVESLNVALAASADQAIVRKVDGVPDL 234 Query: 256 VLTGEYSV 263 + + Sbjct: 235 DIQHDRDT 242 >UniRef50_C9PZW7 RecT family protein n=3 Tax=Bacteroidales RepID=C9PZW7_9BACT Length = 307 Score = 184 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 64/269 (23%), Positives = 108/269 (40%), Gaps = 32/269 (11%) Query: 29 VISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLG 88 + S ++ PS+++Q AL H A + L CD + V ++ + L Sbjct: 15 LKSIVSAPSVQDQFKNALGEHKDA--FVASLIDLYTGDKQLQTCDAKAIVMEALRAATLR 72 Query: 89 LEPGSALGHAYLLPFGN--KNEKSGKKNV---QLIIGYRGMIDLARRSGQIASLSARVVR 143 L ALG AY++ F N KN V + GY+G I LA R+GQ +++A V Sbjct: 73 LPLNRALGFAYIIVFNNNVKNPDGSWSKVPTPTFVPGYKGYIQLAMRTGQYKTINADFVY 132 Query: 144 EGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELV---RSL 200 EG+ + E GE + + + L +G ++ + +++ S Sbjct: 133 EGELRKVDKLKGEVAF--DGEKKSDKIVGYFCYFELLNGFSKTLYVPIEEMAAYALRYSP 190 Query: 201 SKAGNNGP-------------------WVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVS 240 S G N P W ++ +M KT IRRL KY +S+E+Q A+ Sbjct: 191 SFKGKNKPTVEALIAAAQSGAVSSQVGWSGNFNDMGLKTVIRRLLSKYGYLSVEMQTAMD 250 Query: 241 MDEKEPLTIDPADSSVLTGEYSVIDNSEE 269 D ++ + ++I + E Sbjct: 251 KDVEDAGNSRDETIAEHANNKTIIAEAVE 279 >UniRef50_Q14MJ4 Putative rect protein n=1 Tax=Spiroplasma citri RepID=Q14MJ4_SPICI Length = 304 Score = 182 bits (463), Expect = 8e-45, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 104/253 (41%), Gaps = 16/253 (6%) Query: 28 DVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQL 87 +++ F+ + E + + R L + + ++A Q L Sbjct: 3 NIVEFLKTDKVNEWIKSKFSNENEIARFKSNIVAISNSNDLLQKANPRTIMTACYQGVLL 62 Query: 88 GLEPGSALGHAYLLPFGNKNEK--------SGKKNVQLIIGYRGMIDLARRSGQIASLSA 139 L G+AY++P+ K + Q +GY+G I LA+RSGQ +S Sbjct: 63 NLPMEKQFGYAYVVPYNTKITRIINGREIQEWVNQAQFQMGYKGYIQLAQRSGQYLDMSV 122 Query: 140 RVVREGDEFSFEF--GLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELV 197 VR G+ +++ G + E E + A ++ +G + MT++Q+E Sbjct: 123 SDVRVGELVNYDRLKGTSFNWVQNEDEREKLQIIGYVAYFKMVNGFEKTLYMTKEQMENH 182 Query: 198 ---RSLSKAGNNGPWVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDEKEPLTIDPAD 253 S + A N ++ ++EMA KT + L K+ +S+E+Q+A D+ T D Sbjct: 183 FMKYSKTYAKNKSFYIATFDEMALKTVLTSLLRKWGIMSVELQQAYKSDQSVITTNDEN- 241 Query: 254 SSVLTGEYSVIDN 266 + + +V N Sbjct: 242 -IYIDNDTTVAKN 253 >UniRef50_A4XBY1 RecT protein n=1 Tax=Salinispora tropica CNB-440 RepID=A4XBY1_SALTO Length = 299 Score = 180 bits (456), Expect = 5e-44, Method: Composition-based stats. Identities = 76/279 (27%), Positives = 132/279 (47%), Gaps = 33/279 (11%) Query: 15 TQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPA------ 68 TQ A +++ I Q S E A LP H+ +R+A +++ Sbjct: 2 TQTVSQAVATRDNSPAGLITQYS--ESFAQVLPSHIKPATWVRLAQGALKRGKRGDGGRF 59 Query: 69 ----LGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGM 124 + + F++A++ ++ GLEPG+ YL P K G+ + I GY+G Sbjct: 60 ELEIAASNNPGVFLAALLDAARQGLEPGTE--QYYLTPRKVK----GRLEILGITGYQGH 113 Query: 125 IDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIH--RPGENE--DAPVTHVYAVARLK 180 I+L R+G +AS+ A +VRE DE+ ++ G+D+ +H +P + + VYA AR+K Sbjct: 114 IELMYRAGAVASVVAEIVREHDEYRYQRGIDDVPVHRYKPFARDAERGALIGVYAYARMK 173 Query: 181 DGGTQFEV-MTRKQIELVRSLSKAGNN--GPWVTHWEEMAKKTAIRRLFKYLPVSIEIQ- 236 DG V ++R I+ +++ S+ N+ PW H M K+A+R+L K++P S E + Sbjct: 174 DGAVSRVVELSRDDIDRIKASSQGANSEYSPWQKHEAAMWLKSAVRQLQKWVPTSAEFRR 233 Query: 237 ---RAVSMDEKEPLTIDPADSSVLTG----EYSVIDNSE 268 RA + + D D + + V+D + Sbjct: 234 EQLRAAAEAHRVASAADAPDGATAPQGDVLDGEVLDEAP 272 >UniRef50_C2FKJ7 Recombination protein RecT n=2 Tax=Lactobacillus plantarum RepID=C2FKJ7_LACPL Length = 299 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 60/246 (24%), Positives = 95/246 (38%), Gaps = 22/246 (8%) Query: 34 NQPSMKEQLAAALPRHMTAERMIRIATTEIRKV----PALGNCDTMSFVSAIVQCSQLGL 89 N MK +LP + + A + P L CD S + A++ + GL Sbjct: 12 NIEDMKNNEGLSLPPDYSVGNALNSAYLILSDTSKGQPLLDKCDQGSVIKALMNMAIQGL 71 Query: 90 EPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFS 149 P A Y +P+GN + + Y G I + +R + + A+VV + D F Sbjct: 72 SP--AKNQCYFIPYGN--------QLVMQRSYFGSISVVKRLSNVKDIQAQVVHKDDTFK 121 Query: 150 F--EFGLDEKLIHRP-GENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNN 206 E G+ P EN D P+ +A +G + VMT+K I+ S +K Sbjct: 122 IGGENGVLVVKEFEPSFENLDKPIIGAFAWVEDLNGNRTYTVMTKKDIDTSWSHAKTKK- 180 Query: 207 GPWVTHWEEMAKKTAIRRLFKYLPVSI---EIQRAVSMDEKEPLTIDPADSSVLTGEYSV 263 EEMAK+T I R K+ S ++ D + V + S+ Sbjct: 181 -VQNEFPEEMAKRTVINRAAKFYINSSSDNDLFVQAVNDTTSSEYENDDPKDVTPTKRSL 239 Query: 264 IDNSEE 269 + + EE Sbjct: 240 VADVEE 245 >UniRef50_Q03VK6 Recombinational DNA repair protein (RecE pathway) n=1 Tax=Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 RepID=Q03VK6_LEUMM Length = 310 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 60/267 (22%), Positives = 107/267 (40%), Gaps = 32/267 (11%) Query: 29 VISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLG 88 V IN M++ L A + +T + P L + +A ++ + L Sbjct: 8 VQKIINSDKMQKHFEEILQD--NAAGFLSGLSTVVALNPDLAKTNMNDLTNAAMRAAILD 65 Query: 89 LEPGSALGHAYLLPFGNKNEKSGKK-----NVQLIIGYRGMIDLARRSGQIASLSARVVR 143 L LG AY++P+G + + GK Q +GYRG+I L + +G++ L VV Sbjct: 66 LSVLPDLGEAYVIPYGKRAKVDGKWVTKDVKAQFQLGYRGIIKLVQNTGRVGRLGGSVVY 125 Query: 144 EGDEFSFEFGLDEKLI----HRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQ-IELVR 198 E ++ + + DE + + P + ++PV A L DG + ++ I Sbjct: 126 EANKPHYNYVFDEFTMENENYDPYVDGESPVAGYLAFYYL-DGERIVKYWPIQRVINHAT 184 Query: 199 SLSKAGN------------NGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEP 246 S+ PW T ++ MA KT ++ L K+ P + ++ +A++ D+K Sbjct: 185 KFSQTYKGPDHKDRYGKTPQTPWYTDFDAMAIKTVMKDLLKFAPKTTKVAQAIAEDDKNE 244 Query: 247 LTIDPADSSVL-------TGEYSVIDN 266 E +IDN Sbjct: 245 REARDVTPETEEITPEEQNVEPEIIDN 271 >UniRef50_B1XAU6 RecT protein n=3 Tax=Enterobacteriaceae RepID=B1XAU6_ECODH Length = 305 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 57/243 (23%), Positives = 92/243 (37%), Gaps = 25/243 (10%) Query: 42 LAAALPRHMTAERMIRIATTEIRKVPALGNC---DTMSFVSAIVQCSQLGLEPGSALGHA 98 + AA M + + A + L + S +AI+ + +G+ A A Sbjct: 17 IKAATDERMVWAKESQFAIQLFQNNDYLAKVAFQNQTSTQNAIINVAAIGISLNPAQKLA 76 Query: 99 YLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKL 158 YL+P + L I Y G++ +A++SG I + +VR D+F E GLD+ Sbjct: 77 YLVPRKG--------AICLDISYMGLMHIAQQSGAIKWCQSAIVRRNDQFRRE-GLDKPP 127 Query: 159 IHRPGENE----DAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNN-------- 206 IH + + + Y + DG M I +R S+A Sbjct: 128 IHIYNDFDTEEQRGDIVGAYVTVKTDDGDYLTHTMRIDAIYSIRDRSEAWKKYKSDNSKK 187 Query: 207 GPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDN 266 PWVT E+M KT +++ KY P + A+ E S+ E V Sbjct: 188 CPWVTDEEQMILKTVVKQAAKYWPRRERLDAAIDHVNTEGEE-GINFSAERQPERDVTPA 246 Query: 267 SEE 269 +E Sbjct: 247 GDE 249 >UniRef50_D0AR03 RecT protein n=2 Tax=Enterococcus faecium RepID=D0AR03_ENTFC Length = 340 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 104/265 (39%), Gaps = 23/265 (8%) Query: 17 GNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKV------PALG 70 + ++ D N ++EQ +P + + ++ A E+ Sbjct: 3 NDLTQTTQRSLDEQVISNLGRLQEQ-GLEMPPGYSPQNALKSAFFELTNNTGGNLLQMAA 61 Query: 71 NCDTM--SFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLA 128 N M S +A++ GL P A Y + +GNK VQL+ Y G + + Sbjct: 62 NNQEMKTSISNALLDMVIQGLSP--AKKQCYFIKYGNK--------VQLMRSYFGTMAVL 111 Query: 129 RRSGQIASLSARVVREGDEFSFEFGLDEKLIHR---PGENEDAPVTHVYAVARLKDGGTQ 185 R A ++ VVR+GDEF ++ + EN D + Y V +L +G Sbjct: 112 DRVTGGADITPVVVRQGDEFEVAMDGPNMVVKKHETKFENLDNEIIAAYVVIKLTNGKET 171 Query: 186 FEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSI-EIQRAVSMDEK 244 VMT+KQI+ + SK +GP EEMAK+T I R K L + + V + Sbjct: 172 TTVMTKKQIDQSWAKSKMKGSGPQKEFPEEMAKRTVINRAAKALINTSNDNDLLVQAAKD 231 Query: 245 EPLTIDPADSSVLTGEYSVIDNSEE 269 + +T + + E+ Sbjct: 232 TLENEFDNNRKDVTPQTEKVATLEQ 256 >UniRef50_C7Q4I7 RecT protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q4I7_CATAD Length = 313 Score = 173 bits (439), Expect = 5e-42, Method: Composition-based stats. Identities = 67/247 (27%), Positives = 115/247 (46%), Gaps = 27/247 (10%) Query: 10 ADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPAL 69 + A +++ + S A LP H+ E +R+A ++K + Sbjct: 2 TATTENTTASTAVATRDNSPGGMVK--SFSADFAMVLPSHIKPETWVRLAQGALKKGKKV 59 Query: 70 --------------GNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNV 115 N + F+S+++ ++LGLEPG+ YL P K G+ + Sbjct: 60 KLDDGSTRTELEIAANNNPAVFLSSLLDAARLGLEPGTE--QYYLTPRSVK----GQLEI 113 Query: 116 QLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGEN--EDAPVTHV 173 I+GY+G I+L R+G I+S+ A V D F+++ G+ E+ +H + + + V Sbjct: 114 LGIVGYQGYIELMYRAGAISSVVAECVYANDAFTYKPGVHERPLHDIDWDLADRGALRLV 173 Query: 174 YAVARLKDGGT-QFEVMTRKQIELVRSLSKAGNN--GPWVTHWEEMAKKTAIRRLFKYLP 230 YA A + DG T + V+ R I ++ S+ N+ PW TH M K+A+R+L K++P Sbjct: 174 YAYAVMGDGATSKVVVLNRAAILKIKDSSQGANSNYSPWKTHEPAMWLKSAVRQLAKWVP 233 Query: 231 VSIEIQR 237 S E R Sbjct: 234 TSSEYMR 240 >UniRef50_A5N589 Phage-related protein n=16 Tax=Clostridium RepID=A5N589_CLOK5 Length = 268 Score = 173 bits (439), Expect = 5e-42, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 112/246 (45%), Gaps = 23/246 (9%) Query: 36 PSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSAL 95 + E ALP+ R ++ T ++ + C +S +++ + LGL+ + Sbjct: 17 NKLLETKKEALPKDFNKSRFLQNCMTVLQDTKDIDKCQPISVARTMLKGAFLGLDFFNR- 75 Query: 96 GHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRS--GQIASLSARVVREGDEFSFEFG 153 Y +P+ N+Q Y+G I LA++ I + A+VVR+GDEF Sbjct: 76 -ECYAIPYNG--------NLQFQTDYKGEIKLAKKYSINPIKDIYAKVVRKGDEFQESIV 126 Query: 154 LDEKLI-HRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVR-SLSKAGNNGPWVT 211 + + +P + + +AV +DG +E MT+++IE +R + SKA N+ WV Sbjct: 127 NGHQTVNFKPLPFNNDEIIGAFAVCLFQDGSMIYETMTKQEIEDIRNNFSKAKNSPAWVK 186 Query: 212 HWEEMAKKTAIRRLFKYLPV---SIEIQRAVSM------DEKEPLTIDPADSSVLTGEYS 262 EM KKT +RRL K++ + SIE ++ + + + D + + + Sbjct: 187 TPGEMYKKTVLRRLCKFIELDFNSIESKKTYDEASDFQFEHEPNKEVSNFDKGSIDEDKT 246 Query: 263 VIDNSE 268 V ++E Sbjct: 247 VEADTE 252 >UniRef50_B1QU69 RecT family protein n=2 Tax=Clostridium butyricum RepID=B1QU69_CLOBU Length = 295 Score = 172 bits (437), Expect = 8e-42, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 96/259 (37%), Gaps = 23/259 (8%) Query: 15 TQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIR------KVPA 68 + + KN +++ +P + + ++ A + K P Sbjct: 1 MENKQVSVQEKNVTDKVLSRIKALEGTGDITMPANYSYSNALKSAYLILSETVDRDKKPV 60 Query: 69 LGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLA 128 L +C S ++ ++ + GL P A Y + FG K +QL+ Y G I Sbjct: 61 LQSCSQTSIINTLLDMTIQGLSP--AKKQCYFIAFGGK--------LQLMKSYLGNIAAT 110 Query: 129 RRSGQIASLSARVVREGDEFSFEFGLDEKLI------HRPGENEDAPVTHVYAVARLKDG 182 +R + ++ A V+ E DEFS+E L+ L + + YAV ++DG Sbjct: 111 KRLKGVKNVFANVIYEKDEFSYELDLETGLKKITKHNQDFENIDINKIKGAYAVIVMEDG 170 Query: 183 GTQFEVMTRKQIELVRSLSKAG-NNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSM 241 EVM QI S A +G +EMAKKT I R K + + + Sbjct: 171 LNYVEVMNINQIRNSWSQGAAKGQSGAHKNFTDEMAKKTVINRACKNFVCTSDDSDLLIE 230 Query: 242 DEKEPLTIDPADSSVLTGE 260 +P D T E Sbjct: 231 SMNRTNEYNPEDIVESTHE 249 >UniRef50_B2GBH1 Hypothetical phage protein n=1 Tax=Lactobacillus fermentum IFO 3956 RepID=B2GBH1_LACF3 Length = 342 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 65/271 (23%), Positives = 110/271 (40%), Gaps = 32/271 (11%) Query: 20 APAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKV------PALGNCD 73 P K ++K++ ALP H A+ ++ A ++ V PAL C Sbjct: 14 QPTNAKQITSAVAERLDTLKDE-GLALPAHYNAQNALKAAYLRLQTVKDRQGRPALTVCT 72 Query: 74 TMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQ 133 S +A++ + GL P A Y + +GN +Q+ Y G I +R Sbjct: 73 EPSIANALLDMAIQGLSP--AKNQCYFIVYGN--------ELQMQRSYFGTIAALKRLDS 122 Query: 134 IASLSARVVREGDEFSFEFGLDEKLI---HRPGE-NEDAPVTHVYAVARLKDGGTQFEVM 189 I + A+V+ +GDEF +I +P N D P+ +A +L +G T + VM Sbjct: 123 IEDIDAQVIHQGDEFEIGADETGHIIVTKFKPSFANLDKPIKGAFAFIKLTNGRTAYTVM 182 Query: 190 TRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIE-----------IQRA 238 T+ QI++ S S+ N +EMAK+T I R K + + + +A Sbjct: 183 TKAQIDVSWSQSRNRQNKVQDKFSDEMAKRTVINRAAKIFINTSDDSDLLTGSINAVTKA 242 Query: 239 VSMDEKEPLTIDPADSSVLTGEYSVIDNSEE 269 + EP I + ++ + +E Sbjct: 243 EYEEPTEPKDITQTAAEEQGSTAQLLADFKE 273 >UniRef50_A8Z301 Possible recombination protein RecT n=32 Tax=root RepID=A8Z301_STAAT Length = 306 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 101/292 (34%), Gaps = 42/292 (14%) Query: 7 IAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKV 66 + + + + + KN ++ Q LP + ++ A +I + Sbjct: 1 MTENN-KLQTIEQQLVQEKNVSDNVLNKVRVLESQGNLELPNDYSPSNAMKQAWLQISQD 59 Query: 67 PALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMID 126 L +C+ S +A++ GL A Y +P+GNK +QL Y G + Sbjct: 60 NKLMSCNDTSKANALLDMVTQGL--NPAKNQCYFIPYGNK--------MQLQRSYHGNVM 109 Query: 127 LARRSGQIASLSARVVREGDEFSFEFGLDEKL-----IHRPGENEDAPVTHVYAVARLKD 181 + +R + A+V+ +GD F E G ++ + + Y D Sbjct: 110 MLKRDAGAQDVVAQVIYKGDTFKQEMGETGRIKAIKHEQDFFNIDKENIIGAYCTIVFND 169 Query: 182 GGTQF-EVMTRKQIELVRSLSKA-------GNNGPWVTHWEEMAKKTAIRRLFKYLPVSI 233 G + EVMT +QI+ S N+ EEMAKKT I R K + Sbjct: 170 GRDNYIEVMTIEQIKQAWMQSSMIKDEKALQNSKTHNNFKEEMAKKTVINRAAKRYINTS 229 Query: 234 ------------------EIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDNS 267 E+ A + +D + +Y+ ++N Sbjct: 230 TDSNLFKYAQESEQRQRKEVLDAEVEENANQEQLDFEQPVLEEAQYTELEND 281 >UniRef50_C7WI33 Prophage Lp1 protein 18 n=11 Tax=Enterococcus RepID=C7WI33_ENTFA Length = 338 Score = 169 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 98/261 (37%), Gaps = 29/261 (11%) Query: 15 TQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVP-----AL 69 + ++ D N ++EQ +P + + ++ A E+ L Sbjct: 1 MSNDLTQVTQRSLDEQVIGNLNRLQEQ-GLEMPPGYSPQNALKSAFFELTNNSGGNLLQL 59 Query: 70 GNCDTM---SFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMID 126 + S +A++ GL P A Y + +GNK VQL+ Y G + Sbjct: 60 AANNPETKTSISNALLDMVIQGLSP--AKKQCYFIKYGNK--------VQLMRSYFGTMA 109 Query: 127 LARRSGQIASLSARVVREGDEFSFEFGLDEKLI--HRP-GENEDAPVTHVYAVARLKDGG 183 + R A ++ VVREGD F + ++ H EN D + Y V +L +G Sbjct: 110 VLDRVTGGAEITPVVVREGDVFEIAMDGPDLVVAKHETSFENLDNDIKAAYVVIKLANGK 169 Query: 184 TQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIE-----IQRA 238 VMT+KQI+ SKA EEMAK+T I R KYL + +Q A Sbjct: 170 EVTTVMTKKQIDKSW--SKAKTKNVQNDFPEEMAKRTVINRAAKYLINTSNDNDLFVQAA 227 Query: 239 VSMDEKEPLTIDPADSSVLTG 259 E E D Sbjct: 228 KDTLENEFERKDVTPEREEQA 248 >UniRef50_Q708Q2 Putative uncharacterized protein n=2 Tax=root RepID=Q708Q2_9CAUD Length = 323 Score = 167 bits (423), Expect = 4e-40, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 93/246 (37%), Gaps = 20/246 (8%) Query: 23 AVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPA---LGNCDTMSFVS 79 K M+ + + ++ + + A ++ + L C S + Sbjct: 6 TQKQITSPVAARIGEMQNE-GLMIAQNYSVSNALSSAYYALKNSSSGNLLQMCTQDSIYN 64 Query: 80 AIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSA 139 A++ GL P A Y +P+GN V+L Y G + + ++ ++ + A Sbjct: 65 ALLDMVTQGLSP--AKTQCYFIPYGNT--------VKLTRSYFGTMKVVKQLPEVKDIYA 114 Query: 140 RVVREGDEFSF--EFGLDEKLIHRPGE-NEDAPVTHVYAVARLKDGGTQFEVMTRKQIEL 196 V+ EGD+F E G + H N D P+ Y + +DG VMT+K+I+ Sbjct: 115 EVIYEGDKFQIKNENGRKVFVSHETDWVNADNPIAGAYCIIEKEDGEKILTVMTKKEIDK 174 Query: 197 VRSLSKAGNNGPWVTHWEEMAKKTAIRRLFK-YLPVSIEIQRAVSMDEKEPLTIDPADSS 255 + +K N +EMAK+T I R K + S + + + + Sbjct: 175 SWAQAKTKN--VQNNFPQEMAKRTVINRAAKQFFNTSDDNDLFIDAVNRTTENEYDNERQ 232 Query: 256 VLTGEY 261 V E Sbjct: 233 VKEAEP 238 >UniRef50_B4AH83 RecT protein n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AH83_BACPU Length = 306 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 102/264 (38%), Gaps = 22/264 (8%) Query: 15 TQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKV------PA 68 N+ K+ + +++ LP + A ++ A ++++V PA Sbjct: 1 MSKNQLANVQKDITDDVNNSLGRLQDD-GLVLPSNYNASNALKSAFFKLQEVKDKSGRPA 59 Query: 69 LGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLA 128 L C S ++++ GL P A Y + +GNK +Q+ Y G + Sbjct: 60 LEVCTRESIANSLLDMVVQGLSP--AKTQCYFIVYGNK--------LQMNRSYFGTQAVL 109 Query: 129 RRSGQIASLSARVVREGDEFSFEF--GLDEKLIHRPGENEDAP-VTHVYAVARLKDGGTQ 185 +R + + + V+ EGD F +E G ++ + H + YAV + D Sbjct: 110 KRLTNVKDIWSNVIYEGDVFEYEIDGGQEKLIKHETKLENRDKDIIGAYAVVKTIDDIEL 169 Query: 186 FEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFK-YLPVSIEIQRAVSMDEK 244 MT+K+IE S SK + +EMA++T I R K Y+ S + V Sbjct: 170 LTPMTKKEIETAWSQSKT-SGAVQKKFPQEMAQRTVINRAAKRYINTSDDSDLLVQAINN 228 Query: 245 EPLTIDPADSSVLTGEYSVIDNSE 268 + +T + + SE Sbjct: 229 STENEYDNERVDVTPDEVKKEISE 252 >UniRef50_A0M496 RecT family protein n=1 Tax=Gramella forsetii KT0803 RepID=A0M496_GRAFK Length = 313 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 89/256 (34%), Gaps = 24/256 (9%) Query: 14 KTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEI------RKVP 67 +T ++ ++ +P++ + E ++ A + K P Sbjct: 4 ETSKQLVKQKKQDISTRVLAKVNEFEQTGELRIPKNYSVENSLKSAYLILSETKDKNKKP 63 Query: 68 ALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDL 127 L +C S A+++ GL Y +P+G K ++ I Y G I + Sbjct: 64 VLESCSVTSLSEALLKMVVWGL--NPMKKQCYFVPYGGK--------IECIPDYTGKIAM 113 Query: 128 ARRSGQIASLSARVVREGDEFSFEF----GLDEKLIHRPGEN--EDAPVTHVYAVARLKD 181 A+R + + A V + D F FE G + H YA+ + D Sbjct: 114 AKRYAGLKDIKAHAVFKDDTFEFEVDPSTGRKKVTKHTQTLESMGSNEFKGAYAIMEMND 173 Query: 182 GGTQFEVMTRKQIELVRSLSKAGNNGP-WVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVS 240 G E+M++ QI A P + MA+K+ I R L S + + Sbjct: 174 GTFDVEIMSKPQIVAAWQQGHANGTSPAHKKFPDRMARKSVINRACDALIRSSD-DSVLY 232 Query: 241 MDEKEPLTIDPADSSV 256 DE E ID + Sbjct: 233 EDEDERKIIDVPSEDL 248 >UniRef50_Q14KA3 Putative rect protein n=3 Tax=Spiroplasma citri RepID=Q14KA3_SPICI Length = 284 Score = 162 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 104/254 (40%), Gaps = 18/254 (7%) Query: 26 NSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPAL---GNCDTMSFVSAIV 82 N+ + +N + + L + T P L + MS +SA V Sbjct: 2 NNKIELILNNSKVNNWINEKLTNQKEINLFRKNILTIYNNNPNLFDKEKINLMSVLSACV 61 Query: 83 QCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVV 142 + L L LG+AY++P+ K QL IGY+G I LA R+G+ +++A V Sbjct: 62 KAMLLDLPLDPNLGYAYIVPYNGKG--------QLQIGYKGYIQLAIRTGKYLTINAIEV 113 Query: 143 REGDEFSFEFGLDE---KLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIE-LVR 198 ++G+ +F+ E K I E A +L +G + ++++ E + Sbjct: 114 KQGELLNFDELEQEYNFKWITNENERTKKETIGYVAFFKLLNGYKKTLYWSKEKCENHFK 173 Query: 199 SLSKAGNNGPWVT--HWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDEKEPLTIDPADSS 255 + SK T +E MA KT + +L K+ +S+E+Q A D+ + S Sbjct: 174 TYSKNYQTYGKFTAGSYEGMALKTVLTQLLRKWGIMSVEMQEAYQHDQAIIINNSKEFSD 233 Query: 256 VLTGEYSVIDNSEE 269 + +N E Sbjct: 234 NPNIKNKEDNNVIE 247 >UniRef50_A5VKM2 RecT protein n=8 Tax=Lactobacillus reuteri RepID=A5VKM2_LACRD Length = 329 Score = 161 bits (407), Expect = 3e-38, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 98/275 (35%), Gaps = 28/275 (10%) Query: 10 ADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAA-LPRHMTAERMIRIATTEIR---- 64 + + A+ + + I+ K+Q LP + + + A ++ Sbjct: 16 NSILSSVNINQTGALAVGQLRTVIDARINKQQNQGLDLPANYSVPNALTQALLRLQAVKT 75 Query: 65 --KVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYR 122 K P L C S + +++ GL P A Y + +GN +QL Y Sbjct: 76 KGKTPVLQACTPNSIIQSLMDMVVQGLSP--AKDQCYFIAYGN--------ELQLRRSYF 125 Query: 123 GMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLI------HRPGENEDAPVTHVYAV 176 G R I + A+ + EGD+ + L+ H N+D + YA+ Sbjct: 126 GTTAALLRLENITDVDAQAIYEGDQVNTSIDRHGHLVLDTENTHLDWTNQDNELIGAYAI 185 Query: 177 ARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQ 236 DG +MT+KQI++ + SK + EMAK+T + R K + + Sbjct: 186 ITTADGVDHLTIMTKKQIKVSWNQSKT--HDVQNKFGSEMAKRTVLNRAAKMFINTSDDS 243 Query: 237 RAV---SMDEKEPLTIDPADSSVLTGEYSVIDNSE 268 + ++++ D V E E Sbjct: 244 DHLLTGAINDTTSNEYDDERRDVTPVEDEKQSTDE 278 >UniRef50_C0Q2I7 Rac prophage; recombination and repair protein n=4 Tax=Salmonella enterica RepID=C0Q2I7_SALPC Length = 148 Score = 159 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 111/133 (83%), Positives = 120/133 (90%) Query: 47 PRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNK 106 + + + +ATTEIRKVPALG+CDTMSFVSAIVQCSQLGLEPG ALGHAYLL FGN+ Sbjct: 6 GAALQVDGVPAVATTEIRKVPALGDCDTMSFVSAIVQCSQLGLEPGGALGHAYLLAFGNR 65 Query: 107 NEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENE 166 NEKS KKNVQLIIGYRGMIDLARRSGQIASLSARVVRE D+FSFEFGL+EKL+HRPGENE Sbjct: 66 NEKSSKKNVQLIIGYRGMIDLARRSGQIASLSARVVREDDDFSFEFGLEEKLVHRPGENE 125 Query: 167 DAPVTHVYAVARL 179 DA VTHVYAVARL Sbjct: 126 DAQVTHVYAVARL 138 >UniRef50_C0WT85 Putative uncharacterized protein n=1 Tax=Lactobacillus buchneri ATCC 11577 RepID=C0WT85_LACBU Length = 333 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 59/252 (23%), Positives = 91/252 (36%), Gaps = 20/252 (7%) Query: 18 NRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIA---TTEIRKVPALGNCDT 74 N K+ +++ A P++ ++ A T L Sbjct: 3 NELAILQKDLTDQINTKLDGLRK-GGLATPKNYNPANALKSAFFALTNANGGNLLEKGSK 61 Query: 75 MSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQI 134 S +A+V GL P A Y +P+G K V L Y G +R + Sbjct: 62 DSIANALVDMVVQGLTP--AKDQVYFIPYG--------KQVTLQRSYFGTQAALKRLNSV 111 Query: 135 ASLSARVVREGDEFSFEFGLDEKLIHRP---GENEDAPVTHVYAVARLKDGGTQFEVMTR 191 + A VV + DEF ++ + EN D P+ +AV + DG + VMT+ Sbjct: 112 QDIWAEVVHKDDEFEISAEDGRLIVSKFKPSFENLDKPIVGTFAVVQKVDGEKIYTVMTK 171 Query: 192 KQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFK-YLPVSIEIQRAVSMDEKEPLTID 250 KQI+ S+A N+ EEMAK+T I R K +L S + V + Sbjct: 172 KQIDTSW--SQARNHNVQQKFPEEMAKRTVINRAAKNFLNTSDDSDLLVDSINRTTSNEY 229 Query: 251 PADSSVLTGEYS 262 V + Sbjct: 230 DNRKDVTPDKLE 241 >UniRef50_Q3C0K4 RecT protein n=2 Tax=root RepID=Q3C0K4_SODGL Length = 557 Score = 159 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 10/194 (5%) Query: 80 AIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKN--VQLIIGYRGMIDLARRSGQIASL 137 A+ +C+ GL P A L+ KN +G+ V + G++ AR+SGQ+A++ Sbjct: 2 ALKKCATDGLMPDGR--EAALVIRQTKNSSTGQYEDRVVYMPMVDGVLKRARQSGQVANI 59 Query: 138 SARVVREGDEFSFEFG-LDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIEL 196 ++ V D+F + DE L HRP + + VYA A+L G EVM R +++ Sbjct: 60 VSKAVYTADQFDYWVDERDEHLKHRPAFEDRGELRLVYAFAKLTSGELVVEVMGRAEVDK 119 Query: 197 VRS--LSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDE---KEPLTIDP 251 VR+ S + PW ++ MA KT + RL + LP + E+ + + Sbjct: 120 VRATVTSAGKSGSPWAKWYDRMALKTVLHRLARRLPCASEMYALFDAEHVPAEGRTETGA 179 Query: 252 ADSSVLTGEYSVID 265 + + + + D Sbjct: 180 ENRTTVNARPRLRD 193 >UniRef50_A8U879 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U879_9LACT Length = 297 Score = 156 bits (395), Expect = 7e-37, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 87/260 (33%), Gaps = 36/260 (13%) Query: 17 GNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRK------VPALG 70 N K ++ LP + +R A ++++ PAL Sbjct: 3 NNELVLQQKQIADSVEKKVSLFVKEGQLDLPGDYSPGNAMRSAWLKLQEVQTKDYKPALE 62 Query: 71 NCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARR 130 S +A++ GL P G Y + +G+K + Y G + + +R Sbjct: 63 VATKDSVANALLSMVVQGLNPEKNQG--YFIMYGSK--------LTFQRSYFGTMAVTKR 112 Query: 131 SGQIASLSARVVREGDEFSFEF--GLDEKLIHR--PGENEDAPVTHVYAVARLKD-GGTQ 185 + +V+ EGD+ +++ G + L+H+ G + YA + D Sbjct: 113 VTGATDIVGQVIYEGDDVTYDLTNGTIKNLVHKQKFGNINKDKIIGAYATVVMPDEKENH 172 Query: 186 FEVMTRKQIELVRSLSKAGNN--------GPWVTHWEEMAKKTAIRRLFKYLPVSIEIQR 237 E+MT ++I S SK +EMAKKT I R K S + Sbjct: 173 IELMTFEEITAAWSQSKMWGKDQKAPKAGSTHDKFAQEMAKKTVINRACKNFINSSD--- 229 Query: 238 AVSMDEKEPLTIDPADSSVL 257 D S + Sbjct: 230 ----DSSVMTEFFNKQSDEI 245 >UniRef50_C7THK4 RecT family protein n=4 Tax=Lactobacillales RepID=C7THK4_LACRL Length = 291 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 94/247 (38%), Gaps = 29/247 (11%) Query: 36 PSMKEQLAAALPRHMTAERMIRIATTEIRKVPA----LGNCDTMSFVSAIVQCSQLGLEP 91 M++ LP + + + A + L S A++ GL P Sbjct: 14 TEMQKNEGLKLPANYSPSNALNSAWLTLSDNSKGPSLLDKTSPQSQAKALLNMVIQGLSP 73 Query: 92 GSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSF- 150 A Y +P+G K++ L+ Y G + + +R + + A VVREGD+F Sbjct: 74 --AKNQVYFIPYG--------KDLTLMRSYFGSLAILKRLDNVQDVWAEVVREGDKFQIG 123 Query: 151 -EFGLDEKLIHRPG-ENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGP 208 + G + P EN+D + +AV +G F +MT+KQI+ S +K Sbjct: 124 SDRGRTVVKVFEPRIENQDNAIAAAFAVIVDNNGVENFTIMTKKQIDQSWSHAKTKK--V 181 Query: 209 WVTHWEEMAKKTAIRRLFKYLPVS----------IEIQRAVSMDEKEPLTIDPADSSVLT 258 EEMAK+T + R K+ S + A D EP + P ++ Sbjct: 182 QQEFPEEMAKRTVLNRAAKFFINSSSDNDLLLGAVNDTTADEYDNAEPKDVTPNFDDLID 241 Query: 259 GEYSVID 265 + Sbjct: 242 SKPKEES 248 >UniRef50_B7XGP3 DNA recombination protein n=2 Tax=Pseudomonas RepID=B7XGP3_PSEPU Length = 373 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 84/234 (35%), Gaps = 20/234 (8%) Query: 26 NSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNC---DTMSFVSAIV 82 + V Q +L + + + + A+ + L C + +S +A Sbjct: 16 QNAVAIIAKQEEKFIKLVESSKTDVMFKNELLFASQAMMNNDYLCKCATTNPLSLRNAFS 75 Query: 83 QCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVV 142 Q + GL + AYL+P V L + +RGM+ +A G I +V Sbjct: 76 QVAAYGLTLNQSRQLAYLVPRDG--------QVVLDVSWRGMVKVAVNDGAIRDCIVELV 127 Query: 143 REGDEFSFEFGLDEKLIHRPGENE----DAPVTHVYAVARLKDGGTQFEVMTRKQIELVR 198 D+F + G + H + Y A L DG E +T +I R Sbjct: 128 YSKDKFEY-RGKRQSPTHTFNPFDKKADRGEFVGCYVEALLPDGRVHVEAVTADEINAAR 186 Query: 199 SLS---KAGNNGPWVTHWEEMAKKTAIRRLFKYLPVS-IEIQRAVSMDEKEPLT 248 S K GPWV + M KK+AI+ KY P + ++ + + Sbjct: 187 DASELWKRKKKGPWVDFEDSMRKKSAIKIARKYWPQTGSKLDGVIQYLNTDAGE 240 >UniRef50_C8PFI2 Phage recombination protein Bet n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PFI2_9PROT Length = 328 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 56/222 (25%), Positives = 89/222 (40%), Gaps = 25/222 (11%) Query: 42 LAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLL 101 + + T + PAL C S + A ++ +LGL P G AY++ Sbjct: 22 IKTITGGDKAKMSAFAASLTAMASDPALSICSVQSVIGAGLEIVRLGLNPNKTFGQAYVV 81 Query: 102 PFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEF-GLDEKLIH 160 PF NK QL IGY+G + LA R+G I A + DEF F G+ + + Sbjct: 82 PFKNK--------AQLQIGYKGWLSLAYRNGWI--FRALAAYKCDEFEINFAGIKDDIEF 131 Query: 161 RPGENEDAP---------VTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGN-----N 206 P +E + V + G E + K++E +R S+ Sbjct: 132 SPNYDERDETNSLWVFNNLRGVIVYVKDAGGNEFSEFVPFKKLEQLRLKSQNQKDKEALT 191 Query: 207 GPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLT 248 W EEM K AI+ + LP++ +IQ A++ + + Sbjct: 192 NIWGEWAEEMYKAKAIKYVATRLPITEQIQEAINAENEAYKE 233 >UniRef50_Q8L268 DNA recombination protein n=1 Tax=Proteus vulgaris RepID=Q8L268_PROVU Length = 510 Score = 149 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 93/275 (33%), Gaps = 43/275 (15%) Query: 8 AKADLQKTQGNRAPAAVKNSDVISFINQP--SMKEQLAAALP--RHMTAERMIRIATTEI 63 +++ ++ ++ + +++++ A ++ + A I Sbjct: 7 SRSSYDNKSNSKKDTKANPMVLLDTATRHLVTLEKEFTVAASWNPSLSFAKESVFAKNVI 66 Query: 64 RKVPALGNC---DTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIG 120 L + SF +A +Q + GL AL AYL+P + V L + Sbjct: 67 NNNSYLTELAVQNPQSFGTAFLQLATSGLSLDPALKLAYLVPRMGR--------VFLDVS 118 Query: 121 YRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRP------------------ 162 Y G+ LA G + +V D F G + H Sbjct: 119 YIGLSRLATDEGLCQDIVVELVFTDDSFKSN-GRRQSPEHSFDPFADKGPLLLTPEEEKA 177 Query: 163 --GENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGN------NGPWVTHWE 214 GE VY ++KDG +TR+++ RS+S + PW T Sbjct: 178 YTGERPRGVFRGVYVDYQMKDGRNLVYFLTRQELAAARSVSDSWKKTEKRAQSPWTTFPW 237 Query: 215 EMAKKTAIRRLFKYLP-VSIEIQRAVSMDEKEPLT 248 +M +K+AI++ +P + + K+ Sbjct: 238 QMVRKSAIKQTIHQIPGNRTRVATIIDYLNKDGGE 272 >UniRef50_C1MEI7 DNA recombination protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1MEI7_9ENTR Length = 480 Score = 146 bits (368), Expect = 9e-34, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 72/228 (31%), Gaps = 36/228 (15%) Query: 48 RHMTAERMIRIATTEIRKVPALGN---CDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFG 104 H++ ER A + L + + SF +A +Q + GL A AYL+P Sbjct: 10 PHISFERECVFAKHIVNNNNFLADIAVNNPKSFETAFLQLASSGLTLDPAQKQAYLVPRD 69 Query: 105 NKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGE 164 + V L + Y G+ +A G + A +V + D F G H Sbjct: 70 GR--------VILDVSYIGLSRMATDEGLCEDIVAELVFDKDSFKTN-GRRSSPDHEFDP 120 Query: 165 -----------------NEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAG--- 204 + Y +KDG + + + R+ S++ Sbjct: 121 FAYKGGLVLTNTDQGDLGDRGMFRGAYVDYLMKDGRHLVFFIDLQDLAQSRAKSESWAKV 180 Query: 205 ---NNGPWVTHWEEMAKKTAIRRLFKYLP-VSIEIQRAVSMDEKEPLT 248 PW +M K+AI++ +P + + Sbjct: 181 EKRQYSPWTQFPWKMVLKSAIKQTIHLIPGNRTRLSSMIEYLNTAGGE 228 >UniRef50_A6LTW5 RecT protein n=2 Tax=Clostridium RepID=A6LTW5_CLOB8 Length = 306 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 86/247 (34%), Gaps = 26/247 (10%) Query: 31 SFINQPSMKEQLAAALPRHMTAERMIRIATTEIR------KVPALGNCDTMSFVSAIVQC 84 ++++ LP++ +AE I A ++ K AL C S V A+ Sbjct: 17 VMAKIAALEKNNGIKLPKNYSAENAINSAWLMLQEVVDKEKKQALEVCTKTSIVEALYNM 76 Query: 85 SQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVRE 144 GL P Y + G+K + L+ Y G I +R I + A V+ E Sbjct: 77 VLQGLSPSKR--QCYFIVHGSK--------LTLMKSYMGSIVATKRLSGIKDVKAFVIYE 126 Query: 145 GDEFSFEFGLDEKLIH-----RPGENEDAPVTHVYA-VARLKDGGTQFEVMTRKQIELVR 198 GD F F + I + + +A + + E+MT QI Sbjct: 127 GDVFETVFNNETYTIEFNYQPKFENINSNKIKGAFALIIGDDNKLLHTEIMTIDQIRKSW 186 Query: 199 SL---SKAGNNGPWVTHWEEMAKKTAIRRLFK-YLPVSIEIQRAVSMDEKEPLTIDPADS 254 + K+G + EEMAKK+ I R K + S + + D AD Sbjct: 187 GMGIAYKSGKSNTHNDFGEEMAKKSVINRACKRFYNTSDDSDVLIESLNNTDEDYDEADI 246 Query: 255 SVLTGEY 261 E Sbjct: 247 IENAKEQ 253 >UniRef50_C6CX43 RecT protein n=2 Tax=Paenibacillus RepID=C6CX43_PAESJ Length = 299 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 95/248 (38%), Gaps = 34/248 (13%) Query: 15 TQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDT 74 T N+A A+ ++ NQ + E L A + + T E+ T Sbjct: 2 TNNNKAVQAIDTQALVGNFNQTEL-ETLKATIAKGTTNEQFALFVQT------------- 47 Query: 75 MSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQI 134 C++ GL P L Y + + K+ + + I G++ LA+R Q Sbjct: 48 ---------CARSGLNPF--LNQIYCIVYNGKDGPV----MSIQIAVEGIVSLAKRHPQY 92 Query: 135 ASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQI 194 A V+E DEF + + +H+ + Y VA D ++T Q+ Sbjct: 93 GGFIASEVKEHDEFEIDV-VSGVPVHKITSLQRGKTIGAYCVAYRTDAPNIAVIITNDQV 151 Query: 195 ELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADS 254 + + K N W ++++M K AI+R FK IE+ S+ + + P + Sbjct: 152 DHL---LKGRNGQMWKDYFDDMIVKHAIKRAFKR-QYGIEVAEDESVGPETAASPSPYER 207 Query: 255 SVLTGEYS 262 +T E + Sbjct: 208 RDITSEVN 215 >UniRef50_A0L2V3 Putative uncharacterized protein n=1 Tax=Shewanella sp. ANA-3 RepID=A0L2V3_SHESA Length = 215 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 63/188 (33%), Gaps = 10/188 (5%) Query: 41 QLAAALPRHMTAERMIRIATTEIRK----VP-ALGNCDTMSFVSAIVQCSQLGLEPGSAL 95 + A P + + I ++++ P +G + S + + +Q + Sbjct: 20 EFNTAYPNNNFPYSELNILFAQLQRLLMLNPSQIGWVNIHSVFDVMTELTQAQISLNPNR 79 Query: 96 GHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLD 155 A +L SG VQL YRG D A ++G I S +V E D+F + Sbjct: 80 KQASIL--LGAYYDSGWLGVQLCWTYRGYRDAAAKAGIIRSARPVIVYEADDFQWIDSFT 137 Query: 156 -EKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWE 214 + + P + Y VA L GG T + + W + Sbjct: 138 PPRHQYDPFSKNRGNIRGAYCVAELAGGGVCVTHFTFDDLMTTFEHRQVATRA-WNEFFV 196 Query: 215 EMAK-KTA 221 M KT Sbjct: 197 GMILAKTV 204 >UniRef50_B2KDD4 Putative uncharacterized protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDD4_ELUMP Length = 284 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 74/197 (37%), Gaps = 13/197 (6%) Query: 70 GNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLAR 129 G D S A G+ + AYL KN +GK +Q GY G + R Sbjct: 57 GEVDVQSIKEAFKCSMDTGIPVDNRR-LAYLTI--VKNNSTGKYEIQYEPGYMGFVHKLR 113 Query: 130 RSGQIASLSARVVREGDEFSFE----FGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQ 185 + A + ++ E D F+++ + +P ++ + + + G + Sbjct: 114 QIKPGAVVQTILLWEKDVFTYKSTTGVAEYSYVPEKPMRSDFNHIIGGFCYISYFEHGRE 173 Query: 186 FEV---MTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFK-YLPVSIEIQRAVSM 241 + MT+ +++L R KA W EM KK I+R K E+++ + Sbjct: 174 YSFVTPMTKAELDLAR--GKAKTQDVWGVWPGEMYKKVIIKRAGKVEFIGEPEMEKLNEI 231 Query: 242 DEKEPLTIDPADSSVLT 258 D++ + + + Sbjct: 232 DDRSYTGFERKQPAKVD 248 >UniRef50_Q14NF8 Putative rect protein n-terminal truncated n=1 Tax=Spiroplasma citri RepID=Q14NF8_SPICI Length = 197 Score = 116 bits (290), Expect = 9e-25, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 7/160 (4%) Query: 117 LIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDE---KLIHRPGENEDAPVTHV 173 + IGY+G I LA R+G+ +++A V++G+ +F+ E K I E Sbjct: 1 MQIGYKGYIQLAIRTGKYLTINAIEVKQGELLNFDELEQEYNFKWITNENERTKKETIGY 60 Query: 174 YAVARLKDGGTQFEVMTRKQIE-LVRSLSKAGNNGPWVT--HWEEMAKKTAIRRLF-KYL 229 A +L +G + ++++ E ++ SK T +E MA KT + +L K+ Sbjct: 61 VAFFKLLNGYKKTLYWSKEKCENHFKTYSKNYQTYGKFTAGSYEGMALKTVLTQLLRKWG 120 Query: 230 PVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDNSEE 269 +S+E+Q A D+ + S + N E Sbjct: 121 IMSVEMQEAYQHDQAIIINNSKEFSDNPNIKNKEDKNVIE 160 >UniRef50_D2BK83 Phage protein n=2 Tax=root RepID=D2BK83_LACLK Length = 308 Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats. Identities = 55/297 (18%), Positives = 94/297 (31%), Gaps = 59/297 (19%) Query: 17 GNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMS 76 N + +N + + +P++ AE + T + V + Sbjct: 2 TNEIQVTTAEQYQKAALNTLKRQITMGVNIPKNFDAEGAL--GYTALAIVNSGVTVSKEV 59 Query: 77 FVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIAS 136 V +++ + GL Y++P + K V L+ Y G LA +I Sbjct: 60 IVDTLIKVASKGL--DPRKDQLYVIP-------NKKGQVMLMESYFGYEKLAYDIPEIER 110 Query: 137 --LSARVVREGDEFSFEFGLDEKLIHRPGENE-DAPVTHVYAVARLKDGGTQFEVMTRKQ 193 + A VVR+G+ SF+ L H D + YA ++ D M+ Q Sbjct: 111 GSIFAEVVRQGETVSFQ---GRTLEHERAFEAIDNDIIGAYAKVKIGD-EEIAHYMSVYQ 166 Query: 194 IELVRS-----------------LSKAGN-----------------NGPWVTHWEEMAKK 219 I S K+ N EEM+K+ Sbjct: 167 ISKSWSKTNSLDKNFVEEQRHNNYGKSWTVKVADTSKIEKGKLTAFNKNQEDFPEEMSKR 226 Query: 220 TAIRRLFKYLPVS-IEIQRAVSMDEKEPL------TIDPADSSVLTGEYSVIDNSEE 269 T I+ L K + S E A ++D E + D + E ++ +E Sbjct: 227 TVIKALLKPIIKSYAEPTSAAALDNNEEGTVIKEAEVLDDDFVLEEVEAKQVETPKE 283 >UniRef50_C3XHV1 Predicted protein n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XHV1_9HELI Length = 147 Score = 110 bits (276), Expect = 4e-23, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 4/143 (2%) Query: 18 NRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSF 77 + + ++V+ + ++E+L A + ++ I L C S Sbjct: 2 SNNMIQQRKNEVMVLLENKEIQERLCALCGNEASKDKFKASLLN-IALDSNLSACSMQSI 60 Query: 78 VSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASL 137 V A + + L L LG AY++P + ++ IGY+G ++LA+RS S+ Sbjct: 61 VKASLDIAGLKLNLNKNLGKAYIVPRSVRQGNGYVTEARIDIGYKGWLELAKRSKL--SV 118 Query: 138 SARVVREGDEFSFE-FGLDEKLI 159 A V + DEFS+ G++E + Sbjct: 119 KAHSVFDCDEFSYNVMGVNENMT 141 >UniRef50_Q4EN42 RecT protein, putative n=5 Tax=Listeria monocytogenes RepID=Q4EN42_LISMO Length = 303 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 77/210 (36%), Gaps = 29/210 (13%) Query: 70 GNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLAR 129 N F + C GL P L H Y + +GN + + I G+ LAR Sbjct: 31 KNSTPQEFELFVQVCKNSGLNPF--LNHVYFIKYGN--------QMNIQISVEGVEYLAR 80 Query: 130 RSGQIASLSARVVREGDEFSF---EFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQF 186 RS + ++V E DE F E G+ H G VT YA+AR ++ Sbjct: 81 RSEGYRGIDVQLVHEKDEIRFGRNEQGVMTVTKHEFGF-PRGKVTGGYAIARKEN---FP 136 Query: 187 EVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDE--- 243 + + +E V + N W ++ +M KK I+R K + + DE Sbjct: 137 DFVVVMDVEEVEHMKNGTNKNMWSKYFNDMFKKHLIKRAAK-----TQFGIEIGEDEMLP 191 Query: 244 ----KEPLTIDPADSSVLTGEYSVIDNSEE 269 + +P +T I+ EE Sbjct: 192 SNGIENEQEYNPGQRKDITPAQKTIETDEE 221 >UniRef50_Q1CP37 RecT protein n=5 Tax=Streptococcus pyogenes RepID=Q1CP37_STRPF Length = 185 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 4/107 (3%) Query: 162 PGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELV-RSLSKAGNNGPWVTHWEEMAKKT 220 + +A +L +G + T +++ + SK+ +GPW T ++ MA+KT Sbjct: 8 DFSKPQDEIVGYFAAFKLFNGFEKVSFWTVEKVTAHGKKFSKSFASGPWKTDFDAMAQKT 67 Query: 221 AIRR-LFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDN 266 ++ L KY P+S+E+Q+A+ D ++ P D + E + +D+ Sbjct: 68 ILKDILSKYGPLSVEMQKAIEEDNQDSTISTPKD--ITPQEANSLDD 112 >UniRef50_UPI00016930B5 hypothetical protein Plarl_00518 n=2 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016930B5 Length = 226 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 61/198 (30%), Gaps = 28/198 (14%) Query: 34 NQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGS 93 NQ ++ ++ A + +++ T I P + + F+ + + L Sbjct: 4 NQITLTPEINEAFKPEV-----LQVIRTSI--CPTASDAE---FMLFAHKAATYRL--DP 51 Query: 94 ALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFG 153 + + +GN + AR ++V E DEF Sbjct: 52 FKNEIFFIKYGNTARIQFAAEA--------YLAKAREKEGFQPPDTQMVCENDEFKVSKN 103 Query: 154 LD----EKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPW 209 + E H G + Y++A VM R ++E + + N W Sbjct: 104 PETKELEVFEHEIGF-PRGKIIGAYSIAYRDGYRPVTVVMDRSEVEHMFT---GQNKDNW 159 Query: 210 VTHWEEMAKKTAIRRLFK 227 +M K +R K Sbjct: 160 NKWTADMFGKHVEQRALK 177 >UniRef50_B7AAL6 RecT protein n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAL6_THEAQ Length = 308 Score = 97.4 bits (241), Expect = 4e-19, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 17/158 (10%) Query: 78 VSAIVQCSQ-LGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIAS 136 A + +Q LGL+P S ++P + + G+ V I+ G + A R A Sbjct: 27 FQAFLLVAQKLGLDPVSRE----IIP-QVREGQHGR-QVAFIVSRDGYLKAAMRDPGFAG 80 Query: 137 LSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIEL 196 L + VVREGD F + K++HR G + +A+A K+ Sbjct: 81 LQSMVVREGDTFEI-HPSEGKVVHRFGSK-RGEILGAWAIAYHKERPPVIFF------AD 132 Query: 197 VRSLSKAGNNGP-WVTHWEEMAKKTA-IRRLFKYLPVS 232 + +A P W T+ M +K A + L + P+S Sbjct: 133 FKEYYEANKTSPTWRTYPSAMIQKVAEVGALRRQFPLS 170 >UniRef50_Q14KS4 Putative uncharacterized protein n=2 Tax=Spiroplasma citri RepID=Q14KS4_SPICI Length = 295 Score = 94.7 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 82/199 (41%), Gaps = 18/199 (9%) Query: 83 QCSQLGLEPGSALGHAY-----LLPF--GNKNEKSGKKNVQLIIGYRGMIDLARRSGQIA 135 + + LG+ S G + ++PF +K++K ++ +I + SG + Sbjct: 54 KITALGIIKLSNKGLIFGKDFNIIPFKKWDKDKKINSYSLTTVIDSKVYCKKIEESG-YS 112 Query: 136 SLSARVVREGDEFSFEFGLDEKLIHRPGEN----EDAPVTHVYAVARLKDGGTQFEVMTR 191 A ++ +G++F ++ IH N + + YA A+ K+G Q ++ + Sbjct: 113 PRKA-IIFKGEKFEWDSLNSCPKIHEINFNANTSDYNEIIGAYAFAKDKNGNYQGILLRK 171 Query: 192 KQIELVRSLSKAGNN--GPWVTHWEEMAKKTAIRRLFKYL---PVSIEIQRAVSMDEKEP 246 I+ +++ S +GN+ PW +EM + R+L + I++ ++ Sbjct: 172 ADIDRLKNSSPSGNSEYSPWNKWPKEMVEAKLYRKLALEIGTDISDIDLDEKEIKEDGNF 231 Query: 247 LTIDPADSSVLTGEYSVID 265 I D V + + D Sbjct: 232 EYISFKDIDVAKNKGQMSD 250 >UniRef50_UPI0001BC8619 hypothetical protein BacD2_23915 n=1 Tax=Bacteroides sp. D2 RepID=UPI0001BC8619 Length = 324 Score = 91.6 bits (226), Expect = 2e-17, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 54/161 (33%), Gaps = 14/161 (8%) Query: 63 IRKVPALGNCDTMSFVSAIVQCSQLGLEPG-SALGHAYLLPFGNKNEKSG--------KK 113 +R P L + MS + + GL + Y+L +K K+ Sbjct: 58 LRDNPDLADSTKMSLYGCFLDIAVNGLTLDQTGHPLCYILSRSSKTGHKNAQGYDIYEKR 117 Query: 114 NVQLIIGYRGMIDLARRSGQIASL-SARVVREGDEFSFEF--GLDEKLIHRPGENEDAPV 170 + GY G + + R+GQI + VV EGD F G+ V Sbjct: 118 AYVSVTGY-GELTMRMRAGQIKYADNPVVVYEGDHFKASLVNGIKNIEYEAQCPRTSTKV 176 Query: 171 THVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVT 211 + D ++ + IE ++ S+ N+ W Sbjct: 177 IAAFIRIVRNDNSVDYQWLMEGDIERLKHYSEKANSK-WND 216 >UniRef50_B0N8M1 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N8M1_9FIRM Length = 315 Score = 90.9 bits (224), Expect = 4e-17, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 84/210 (40%), Gaps = 31/210 (14%) Query: 85 SQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLA----RRSGQIASLSAR 140 ++LGL +L N K+GKK++ + I Y+G L +++ + ++ Sbjct: 83 ARLGLSLND--KEIWLDIRNN--TKAGKKDINIKIQYQGEEKLLSKFCKKNHGVKNIIKD 138 Query: 141 VVREGDEF----SFEFGLDEKLIHRP--------GENEDAPVTHVYAVARLKDGGTQFEV 188 VV EG+E F+ G E + H+ V YAVA +G + Sbjct: 139 VVLEGEELVQKRDFKTGDYEIIDHKIPDILNRNIDFKNKDKVKGAYAVAYHNNGSQTAII 198 Query: 189 MTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIR----RLFKYLPVSIEIQR-----AV 239 + + +I+ +K W + +++M KT + L K+ + E+ + + Sbjct: 199 IDKDRIDRAMKAAKTAM--VWQSDFKKMVLKTVVHELYQELAKFNVIPDELLKDYSEMVI 256 Query: 240 SMDEKEPLTIDPADSSVLTGEYSVIDNSEE 269 + +E + A+ + ++ D + E Sbjct: 257 AKNEVQSEINANANKEFIDVDFVENDAAPE 286 >UniRef50_B5D087 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5D087_9BACE Length = 319 Score = 90.5 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 55/161 (34%), Gaps = 14/161 (8%) Query: 63 IRKVPALGNCDTMSFVSAIVQCSQLGLEPG-SALGHAYLLPFGNK--------NEKSGKK 113 +R P + MS + + GL + Y+L K N+ K+ Sbjct: 58 LRDNPDVSTSSKMSLYGCFLDIAVNGLTLDQTGHPLCYILSRNCKTGYKNEHGNDIYEKR 117 Query: 114 NVQLIIGYRGMIDLARRSGQIASL-SARVVREGDEFSFEFGLDEKLIHRPG--ENEDAPV 170 + GY G + + R+GQI + VV EGD F K I V Sbjct: 118 AYVSVTGY-GELTMRMRAGQIKYADNPVVVYEGDHFKASLVNGVKNIEYEAQCPRTSTKV 176 Query: 171 THVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVT 211 + D ++ + + IE ++ S+ N+ W Sbjct: 177 IAAFIRIVRNDNSVDYQWLMQGDIERLKHYSEKANSK-WNE 216 >UniRef50_A0L2V4 Putative uncharacterized protein n=1 Tax=Shewanella sp. ANA-3 RepID=A0L2V4_SHESA Length = 240 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 16/157 (10%) Query: 74 TMSFVSAIVQC--SQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRS 131 + A + + GL YL + + ++ + Y G +DLA +S Sbjct: 41 PRDQLEAYMLSVYAATGLSWSPGENLLYL-------ALNDEGQIETKLTYIGGLDLALQS 93 Query: 132 GQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTR 191 G+I + A +REGD + + + A A L G E ++ Sbjct: 94 GEIQAYQAWAIREGDSIRVFNDRMPLVSLVGLSPKRGELRGGIASALLPSG----EYVSF 149 Query: 192 KQIELVRSLSKAGNNG-PWVTHW-EEMAKKTAIRRLF 226 +I+ + S A N W + + +EM KK A+ RL Sbjct: 150 -EIDQIELESVAENGSEVWQSIYVDEMVKKQALWRLL 185 >UniRef50_C5UY99 Phage recombination protein Bet n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UY99_CLOBO Length = 323 Score = 84.3 bits (207), Expect = 3e-15, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 73/218 (33%), Gaps = 29/218 (13%) Query: 57 RIATTEIRKVPALGNCDTMSFVS-----AIVQCSQLGLEPGSALGHAYLLPFGNKNEKSG 111 +I T+ L N D + + ++ C GL P + A+L+ FGN+ Sbjct: 17 KIELTQGMVKQYLVNGDVRAVTNEEIGMFMMLCKSQGLNPF--VKEAHLIKFGNRP---- 70 Query: 112 KKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVT 171 +I+G A R+ + A V+ + E+ + + Sbjct: 71 ---ATMIVGKDAFTKRANRNPNYEGVEAGVIVVNFKKEIEYREGSFYV-----KNGEQLV 122 Query: 172 HVYAVARLKDG-GTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLP 230 +A K+ ++ + E ++ KA N W T M +K A+ + + Sbjct: 123 GGWAKVHTKNKKFADMITVSYDEYEGKKADGKA--NSNWSTRPGTMIRKVALVQALREA- 179 Query: 231 VSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDNSE 268 + S +E D + L E I+ + Sbjct: 180 FPDDFVGMYSAEEM------GIDETELNHEPVNIEEEQ 211 >UniRef50_Q1DAT2 Phage recombination protein Bet n=2 Tax=Cystobacterineae RepID=Q1DAT2_MYXXD Length = 364 Score = 78.5 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 50/161 (31%), Gaps = 19/161 (11%) Query: 77 FVSAIVQCSQLGLEPGSALGHAYLLPF----GNKNEKSGKKNVQLIIGYRGMIDLARRSG 132 F I QC + GL L A+ + GN+ + + GM+ A R Sbjct: 45 FALFIEQCKRSGL--DPLLKEAFCVARRQNAGNRERPNWVTKYEFQPSEAGMLARAERFP 102 Query: 133 QIASLSARVVREGDEFSFEFGLDEKLIHRPGE-NEDAPVTHVYAVARLKDGGTQFEVMTR 191 + A V D+ + G E ++HR + ++ +D + Sbjct: 103 DFKGIQASAVFAEDDIVVDQGRGE-VVHRFNPAKRKGALVGAWSRVVREDKLPVVVWL-- 159 Query: 192 KQIELVRSLSKAGNNGP-WVTHWEEMAKKTA-IRRLFKYLP 230 S P W M +K A + L K P Sbjct: 160 -------DFSGYVQQTPLWSKIPTTMIEKCARVAALRKAYP 193 >UniRef50_A8ATK8 Gp50 n=3 Tax=root RepID=A8ATK8_9CAUD Length = 261 Score = 60.4 bits (145), Expect = 6e-08, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 61/213 (28%), Gaps = 33/213 (15%) Query: 70 GNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLAR 129 + + C L P L AYL+ F N K Q+I+ + A Sbjct: 44 AEVTDQEIIMFLQLCKYQKLNPF--LNEAYLVKFKNTKGPD--KPAQIIVSKEAFMKRAE 99 Query: 130 RSGQIASLSARVVRE--GDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFE 187 Q A V+ E G+ E + + +A KD Sbjct: 100 THEQYDGFEAGVIVERGGEIIELEGAVS---------LASDKLLGGWAKVFRKDRNRPVS 150 Query: 188 VMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFK------YLPVSIE-----IQ 236 V + W T M +KTA+ + + E +Q Sbjct: 151 V-------RISEKEFNKRQSTWNTMPLTMMRKTAVVNAMREAFPDNLGAMYTEEEQGSLQ 203 Query: 237 RAVSMDEKEPLTIDPADSSVLTGEYSVIDNSEE 269 + ++E A+ + + + + + +E Sbjct: 204 NTETSVQQEIKQNANAEVLDIPSQQNEVPDFKE 236 >UniRef50_A6TRD8 Phage recombination protein Bet n=4 Tax=Clostridiaceae RepID=A6TRD8_ALKMQ Length = 264 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 59/198 (29%), Gaps = 24/198 (12%) Query: 71 NCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARR 130 V I C L P L AYL+ F QLI + A Sbjct: 36 TVSEQEIVMFINLCKYQKLNPF--LNEAYLVKFKGAP-------AQLITSKEAYMKRAFD 86 Query: 131 SGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMT 190 + + A ++ + G + + + +A +KD ++ +T Sbjct: 87 HPKFDGIKAGII-------VQRGEETLELEGSFSLPGDQLLGGWAEVYVKD--KKYPYIT 137 Query: 191 RKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTID 250 + I+ W + M +KTA+ + + + + DE+ + Sbjct: 138 KINIDEF-----NKGQATWKAMPKTMIRKTALVQALREA-FPDNLGAMYTDDEQVIVKET 191 Query: 251 PADSSVLTGEYSVIDNSE 268 + E N++ Sbjct: 192 NTVEVEVAEEIQQNANNQ 209 >UniRef50_Q1CQT2 Phage protein, RecT family n=4 Tax=Streptococcus RepID=Q1CQT2_STRPC Length = 263 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 47/142 (33%), Gaps = 16/142 (11%) Query: 88 GLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSAR--VVREG 145 G Y++ + N + LI+ + A R A V+R G Sbjct: 50 GRNLNPFANEVYIVAYKNNSGTDFS----LIVSKEAFMKRAERCEGYDGFEAGITVMRNG 105 Query: 146 DEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGN 205 + E L + D + +A+ KD +++V T E V+ Sbjct: 106 EMVEIEGSL---------KLPDDVLIGGWAIVYRKDRSHRYKV-TVDFNEYVKLDKYGNP 155 Query: 206 NGPWVTHWEEMAKKTAIRRLFK 227 W + M +KTA+ + + Sbjct: 156 RSTWKSMPGTMIRKTALVQTLR 177 >UniRef50_B6GAM9 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAM9_9ACTN Length = 270 Score = 54.6 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 59/205 (28%), Gaps = 37/205 (18%) Query: 70 GNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLAR 129 N + C L P + AYL+ +G +I Y+ A Sbjct: 28 ENATEKEVGLFLQLCQTQRLNPF--VKDAYLVKYGGAP-------ASMITSYQVFNRRAC 78 Query: 130 RSGQIASLSARVVREGDEFSFEFGLDEKLIHRPG----ENEDAPVTHVYAVARLKDGGTQ 185 R + + VV D ++H+ G + + +A R KDG Sbjct: 79 RDANYDGIKSGVV---------VLRDGDVVHKRGAACYKKAGEELIGGWAEVRFKDGRET 129 Query: 186 FEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKY-LPVS-------IEIQR 237 ++ + S W M +K A ++ P + E+ + Sbjct: 130 A----YAEV-ALDDYSTGK--SNWAKMPGVMIEKCAKAAAWRLAFPDTFQGMYAAEEMDQ 182 Query: 238 AVSMDEKEPLTIDPADSSVLTGEYS 262 A ++ P D + + Sbjct: 183 AQQPEQVRAQAEQPVDLQPIRELFK 207 >UniRef50_C5RN39 Phage recombination protein Bet n=1 Tax=Clostridium cellulovorans 743B RepID=C5RN39_CLOCL Length = 322 Score = 53.9 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 57/185 (30%), Gaps = 20/185 (10%) Query: 87 LGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGD 146 G + L AYL+ +G+ + Q+I+G A + + ++ Sbjct: 52 QGQKLNPFLREAYLVKYGD-------QAAQMIVGKDAFTKRAETNENYKGSKSGIIIINL 104 Query: 147 EFSFEFGLDEKLIHRPGENEDAPVTHVYA-VARLKDGGTQFEVMTRKQIELVRSLSKAGN 205 + E + + E + +A V D + ++ + Sbjct: 105 KGELEEREGTFYLSKHKEK-KEELVGGWAKVFFKNDKEEVYHTVSFDEYNT--------G 155 Query: 206 NGPWVTHWEEMAKKTAIRRLFKY-LPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVI 264 W + M +K A+ + + P S + + + +E P D + Sbjct: 156 KSLWGSKPATMIRKVALVQALREAFPNS--LSQLYTAEEVGVDEDLPTDPVNVEDRMREE 213 Query: 265 DNSEE 269 + EE Sbjct: 214 NKVEE 218 >UniRef50_A5GYJ1 Sak n=9 Tax=root RepID=A5GYJ1_9CAUD Length = 245 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/141 (11%), Positives = 39/141 (27%), Gaps = 17/141 (12%) Query: 90 EPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFS 149 + Y + +GN+ Q+++ A ++ + V+ + Sbjct: 44 NMNPFMKEVYFIKYGNQP-------AQIVVSRDFYRKRAFQNPNFVGIEVGVIVLNKDGV 96 Query: 150 FEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGG-TQFEVMTRKQIELVRSLSKAGNNGP 208 E H + +A LK+ + ++ + ++ N Sbjct: 97 LEHNEGTFKTHEQ------ELVGAWARVHLKNTEIPVYVAVSYDEYVQMKD---GHPNKM 147 Query: 209 WVTHWEEMAKKTAIRRLFKYL 229 W M K A + + Sbjct: 148 WTNKPCTMLGKVAESQALRMA 168 >UniRef50_A4XJG5 Phage recombination protein Bet n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XJG5_CALS8 Length = 344 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 63/199 (31%), Gaps = 20/199 (10%) Query: 70 GNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLAR 129 V + C L P YL+ FG++ L++ I A+ Sbjct: 43 SKVSDEEVVLFMKLCEAQKLNPFRR--DVYLIKFGDEP-------ASLVVSKDVFIRRAQ 93 Query: 130 RSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKD-GGTQFEV 188 +SG A V+ + D+ S E ++ D + +A KD Sbjct: 94 KSGLCNGWRAGVIIQHDDGSVEERQGTLVL------PDEKLVGGWAEVFRKDWQVPLKIT 147 Query: 189 MTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPL- 247 +T + R + + W M +K A+ + + + E+Q +E Sbjct: 148 VTLSEYLRRRKDGQPMRS--WQQMPATMIRKVALEQALREAFM-EELQGLYGAEEMGAEL 204 Query: 248 TIDPADSSVLTGEYSVIDN 266 P + E ++N Sbjct: 205 DETPMVQPAVVSELKEVEN 223 >UniRef50_C1CGI1 Phage recombination protein Bet n=2 Tax=Streptococcus pneumoniae RepID=C1CGI1_STRZJ Length = 272 Score = 48.5 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 36/246 (14%), Positives = 65/246 (26%), Gaps = 47/246 (19%) Query: 39 KEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHA 98 Q+ A +T +++ P G I Q L P + Sbjct: 3 NNQIVEAKGDFLTNPQLLNSGIIRKYLDPQ-GKASDEELAYFIAQAKAQNLNPFT--KEI 59 Query: 99 YLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGD-EFSFEFGLDEK 157 Y + +G + Q++ A Q A V+ D E + G Sbjct: 60 YFIKYGTQP-------AQIVTAKSAFEKKADSHPQFDGKEAGVIYLMDGEIKYSKG---- 108 Query: 158 LIHRPGENEDA-PVTHVYAVARLKDGGTQFEV-MTRKQIELVR----------------- 198 + +A KD E ++ ++ + + Sbjct: 109 -----AFIPKGAEILGGWAKVYRKDRTYPTETEVSFEEYDNSKIRARVKELTQQGKDVTY 163 Query: 199 ----SLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADS 254 S K W T M +K A+ ++ E+ + DE + +D Sbjct: 164 PVMNSYGKPIGENNWDTMPCVMIRKVALVSAYREA-FPAELGASYEADE---IQLDNTPK 219 Query: 255 SVLTGE 260 V E Sbjct: 220 DVTPQE 225 >UniRef50_Q4HNA9 Phage recombination protein Bet, putative n=4 Tax=Campylobacter RepID=Q4HNA9_CAMUP Length = 268 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 61/195 (31%), Gaps = 28/195 (14%) Query: 73 DTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKN-VQLIIGYRGMIDLARRS 131 + S L + +P +KN + ++ ++G G + +A +S Sbjct: 29 NANSIEMEYCFSVAYQYNLDPILRQIFFVPRRSKNAEGKWIEKIEPLVGRDGFLAIAHKS 88 Query: 132 GQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTR 191 G+ A + S+ + + + KD F Sbjct: 89 GEFAGIK----------SWSEVKSIPKLENGSWKNVSDLI-AICEVYRKDSDKAF----- 132 Query: 192 KQIELVRSLSKAGNNGP-----WVTHWEEMAKKTAIRRLF-KYLPVSIEIQRAVSMDEKE 245 ++E+ S + W T + M KK A + K +S S +E Sbjct: 133 -RVEVAYSEYVQMTSSNEITHFWKTKPDTMLKKVAESQALRKAFNLS----GLYSPEELG 187 Query: 246 PLTIDPADSSVLTGE 260 +D +++ ++ + Sbjct: 188 LGIVDESNAVIIDTQ 202 >UniRef50_A7DYD3 Putative uncharacterized protein n=1 Tax=Streptococcus phage M102 RepID=A7DYD3_9CAUD Length = 248 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 24/183 (13%), Positives = 51/183 (27%), Gaps = 21/183 (11%) Query: 81 IVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSAR 140 + G Y + +G+ Q+++ ++ A + A Sbjct: 40 ALLAIVKGRNLNPFTKEVYFIKYGSAP-------AQIVVSKEAIMKRAEENPDFDGFEAG 92 Query: 141 VVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSL 200 +V E + + E + + A + + KD + + + Sbjct: 93 IVVETKDGAIERLTGTIV------PKSATLRGGWCKVYRKDRSHAI------EADADFAY 140 Query: 201 SKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGE 260 N W M +K AI F+ S + + DE + T + + Sbjct: 141 YTTSKN-LWQKMPALMIRKVAIVSAFREA-FSESVGGLYTADEMQRETQAEVRARKMKEA 198 Query: 261 YSV 263 Y Sbjct: 199 YEE 201 >UniRef50_Q18AA7 Putative phage recombination protein n=1 Tax=Clostridium difficile 630 RepID=Q18AA7_CLOD6 Length = 300 Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 30/162 (18%) Query: 70 GNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLAR 129 GN + I C L P + AYL+ FGN +++G + A Sbjct: 33 GNVTDQEVLMFIELCKAQKLNPF--IKEAYLIKFGNSP-------ANIVVGKDVFVKRAN 83 Query: 130 RSGQIASLSARVV---REGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKD-GGTQ 185 ++ + A +V + G+ F E L + + + ++ Sbjct: 84 KNPNFEGMKAGIVTVNKNGEIFEREGSL---------KLPQEELIGGWCEVSVRGMKFPI 134 Query: 186 FEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFK 227 V++ ++ S S+A W M +K AI + Sbjct: 135 KSVVSLEE----YSKSQA----TWKQMPCVMIRKCAIVTALR 168 >UniRef50_C7MM83 Phage recombination protein Bet n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MM83_CRYCD Length = 224 Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 59/212 (27%), Gaps = 22/212 (10%) Query: 58 IATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQL 117 IA + D SF++ +C GL G AY+ + K+ + + Sbjct: 25 IAKYIVSGNGLASEKDIYSFMA---RCQARGL--NPLAGDAYMTVYQGKDGNTSSSVIVS 79 Query: 118 IIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVA 177 Y A+ S + A V + + + + +A Sbjct: 80 K-DYFVRTATAQDS--FDGMEAGVTVLNGQGQIQKREGC----EFFPSLGEKLLGGWAKV 132 Query: 178 RLKDGGTQFEV-MTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQ 236 +KD + +T + + R W + M +K AI + + + Sbjct: 133 HVKDREHPSKAAVTMDEYDQHR--------SLWKSKPATMIRKVAIVQALREA-YPGQFG 183 Query: 237 RAVSMDEKEPLTIDPADSSVLTGEYSVIDNSE 268 DE P + + + Sbjct: 184 GVYDRDEMPPSQEPQQVPVEVYEAPEAYETPD 215 >UniRef50_A1AQ73 Phage recombination protein Bet n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQ73_PELPD Length = 322 Score = 44.6 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 41/139 (29%), Gaps = 12/139 (8%) Query: 89 LEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEF 148 L + + K + V+ ++G G + +A RS Q A + Sbjct: 42 LCLNPITKEIFFVKRRQKIDDKWVTKVEPMVGRDGFLSIAHRSKQFAGI----------- 90 Query: 149 SFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGP 208 G+ E G+ + KD F V E + S+ Sbjct: 91 ETTAGIREVPQLEGGQWGFKNQLVTECIVWRKDSPKPFTV-QVAYNEYCQRNSEGNPTKF 149 Query: 209 WVTHWEEMAKKTAIRRLFK 227 W E M KK A + + Sbjct: 150 WAEKPETMLKKVAESQALR 168 >UniRef50_Q3ABH5 Prophage LambdaCh01, recombination protein Bet n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABH5_CARHZ Length = 293 Score = 44.2 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 57/204 (27%), Gaps = 27/204 (13%) Query: 72 CDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNV-QLIIGYRGMIDLARR 130 + Q + GL+P + + + + V + G G +A R Sbjct: 37 ATDDELALFLYQAKRTGLDPLTR--QIHFVKRKQRQPDGSIVEVGTIQTGIDGFRVIAER 94 Query: 131 SGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMT 190 SG+ G + G D + R P D + + Sbjct: 95 SGK---------YAGQLGPYWCGKDGQW--RDVWLSPDPPVAAKVGILRSD--FKEPIWA 141 Query: 191 RKQIEL-VRSLSKAGNNGPWVTHWEEM----AKKTAIRRLFKYLPVSIEIQRAVSMDEKE 245 + + + S W + M A+ AIR+ F + + E+ Sbjct: 142 VARFDAYAQRKSDGKLFENWAKMPDLMLAKCAEALAIRKAF------PQDLSGIYAHEEM 195 Query: 246 PLTIDPADSSVLTGEYSVIDNSEE 269 + P + + E +N + Sbjct: 196 GQSYIPEQNRIAEPEIIPSENGND 219 >UniRef50_A7ILD9 Putative uncharacterized protein n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7ILD9_XANP2 Length = 369 Score = 44.2 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 26/150 (17%) Query: 73 DTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSG 132 + + AI+ +LG+ P +AL ++ + G I L R SG Sbjct: 44 NVQAVAIAIMTGLELGVPPMTALQRIAVI--NGRPTIWGDLA----------IALVRASG 91 Query: 133 QIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRK 192 ++ ++ EGD+ + + + V ++VA D R+ Sbjct: 92 LAETIKEEILGEGDD-------RVAICTVKRKGDPQQVVGSFSVA---DAKRARLWDPRE 141 Query: 193 QIELVRS----LSKAGNNGPWVTHWEEMAK 218 +++ R +A N+ PW E M K Sbjct: 142 KVQRRRQDGNGTYEALNDAPWHRFPERMMK 171 >UniRef50_C7IDX1 Putative uncharacterized protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IDX1_9CLOT Length = 207 Score = 42.3 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 66/195 (33%), Gaps = 25/195 (12%) Query: 1 MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAA----ALPRHMTAERMI 56 +TK P ++ A + S + I +++LA L + Sbjct: 10 VTKAAPKKLNASERFT---AMVMKEFSSGVGEIQLTDFQKRLARNYFIVLDATLKTAEAK 66 Query: 57 RIATTEIRKVPALGNCDTMSFVSAIVQC--------SQLGLEPGSALGHAYLLPFGNKNE 108 RI E + S+ + ++ +++GL+P + H ++P+ KN Sbjct: 67 RIVKNEKTTNEKYKETLSFSWENINMEILARNVVSYARIGLDP-AQKNHINMIPY--KNN 123 Query: 109 KSGKKNVQLIIGYRGMIDLARRSG-QIAS-LSARVVREGDEFS-----FEFGLDEKLIHR 161 + K ++ I GYRG+ ++ G I + +V D F ++ Sbjct: 124 TTKKYDIGFIEGYRGLELKGKKYGLDIPDSVIVELVFSKDVFKPIKKSASNKIESYEFEI 183 Query: 162 PGENEDAPVTHVYAV 176 + + + Sbjct: 184 TSPFDRGEIVGGFYY 198 >UniRef50_D0GLJ4 Phage recombination protein Bet n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GLJ4_9FUSO Length = 251 Score = 41.9 bits (97), Expect = 0.021, Method: Composition-based stats. Identities = 28/210 (13%), Positives = 56/210 (26%), Gaps = 24/210 (11%) Query: 70 GNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLAR 129 GN + + C L P AYL+ + +K+ +++ + A Sbjct: 39 GNVTDEEIMYFMKLCKARNLNPFVR--DAYLIKYSDKDA------ATIVVAKDAIEKRAI 90 Query: 130 RSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKD-GGTQFEV 188 + + + E G EK E + + KD Sbjct: 91 QHPKYNGKEVGLY----IIKKETGDLEKRNGTIYLKEKEEIAGAWCTVYRKDWDNPVTVE 146 Query: 189 MTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFK--YLPVSIEIQRAVSM----- 241 + + + A N W M K A + + ++ + A Sbjct: 147 VNFDEYVGRKKDGTA--NINWANRPVTMITKVAKAQALREAFIEEISGMYEAEEAGINVN 204 Query: 242 --DEKEPLTIDPADSSVLTGEYSVIDNSEE 269 D+ D + +T + +E Sbjct: 205 DLDDTPIEQKDMQNMPDVTNTVQETEIDDE 234 >UniRef50_C0QSA2 Putative uncharacterized protein n=1 Tax=Persephonella marina EX-H1 RepID=C0QSA2_PERMH Length = 359 Score = 41.9 bits (97), Expect = 0.025, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 62/187 (33%), Gaps = 35/187 (18%) Query: 80 AIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSA 139 A++ + L LGH ++ +L I G++ +A SG++ + Sbjct: 44 ALIVLAAQQLGLNPILGHLTII------------QDRLYITNAGLLHIAHNSGKLQGIKT 91 Query: 140 RVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRS 199 R E + ++ G + K IH A LK + + Sbjct: 92 RPATEEERKAYFLGNNPKDIHLWR-----------AEVYLKGQKEPYIGWGKA------- 133 Query: 200 LSKAGNNGPW--VTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVL 257 + N W ++ +EMA+ A+ R + +DE+ + D + Sbjct: 134 ---STNEKSWAVKSNPQEMAETRAVNRALRKAFNVAGYTSVEEIDEEPQFINEEDDEEPI 190 Query: 258 TGEYSVI 264 T E I Sbjct: 191 TQEQVKI 197 >UniRef50_A4E7B6 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E7B6_9ACTN Length = 299 Score = 41.2 bits (95), Expect = 0.034, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 38/131 (29%), Gaps = 23/131 (17%) Query: 91 PGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVV--REGDEF 148 YL+ + + +I Y+ A R + + VV REG Sbjct: 48 LNPFTKEVYLVKYRDAP-------ASIITSYQVFNRRANRQESYGGIKSGVVVMREGQIV 100 Query: 149 SFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGP 208 +++ + + +A + KDG V ++ + S Sbjct: 101 K----KRGSAVYKQVGEQ---LLGGWAEVQFKDGKEPAYV----EL-ALTDYSTGK--SN 146 Query: 209 WVTHWEEMAKK 219 W M +K Sbjct: 147 WAKMPGVMIEK 157 >UniRef50_D1AH69 Phage recombination protein Bet n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AH69_SEBTE Length = 238 Score = 40.0 bits (92), Expect = 0.096, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 60/201 (29%), Gaps = 20/201 (9%) Query: 72 CDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRS 131 V + C L P + AYL+ +G + +++ + A ++ Sbjct: 44 VTDQEIVYFMHLCKSRQLNPF--IKEAYLIKYG-------HEPATMVVARDALEKRAIKN 94 Query: 132 GQIASLSARV-VREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEV-M 189 Q + V + I E + + KD V + Sbjct: 95 VQYNGKKVGIYVMNKETNELIKRDGTIYI-----KETEKLIGAWCTVYRKDWENPVSVEV 149 Query: 190 TRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTI 249 + + N W M K A + + + E++ +E Sbjct: 150 NLDEYIGRKKDGTV--NANWTNKPVTMVTKVAKAQALREAFI-EELEGMYEQEEVNVNLN 206 Query: 250 DPADSSVLTGEYSVI-DNSEE 269 D +++ ++T + I DN+ E Sbjct: 207 DISEAEIITDDIEDIQDNTNE 227 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.309 0.138 0.358 Lambda K H 0.267 0.0425 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,385,610,837 Number of Sequences: 3077464 Number of extensions: 53093819 Number of successful extensions: 143880 Number of sequences better than 1.0e-01: 120 Number of HSP's better than 0.1 without gapping: 207 Number of HSP's successfully gapped in prelim test: 97 Number of HSP's that attempted gapping in prelim test: 142916 Number of HSP's gapped (non-prelim): 325 length of query: 269 length of database: 1,040,396,356 effective HSP length: 126 effective length of query: 143 effective length of database: 652,635,892 effective search space: 93326932556 effective search space used: 93326932556 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 92 (40.0 bits)