BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (201 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_C4K7W2 Recombination protein recR n=48 Tax=Bacteria Rep... 301 1e-80 UniRef50_Q5ZRX0 Recombination protein recR n=10 Tax=Gammaproteob... 228 9e-59 UniRef50_UPI0000E87F50 recombination protein RecR n=1 Tax=Methyl... 218 1e-55 UniRef50_A5EY33 Recombination protein recR n=2 Tax=Gammaproteoba... 208 1e-52 UniRef50_Q12B97 Recombination protein recR n=671 Tax=Proteobacte... 201 9e-51 UniRef50_Q4FTL1 Recombination protein recR n=3 Tax=Gammaproteoba... 195 8e-49 UniRef50_C8PX50 Recombination protein RecR n=1 Tax=Enhydrobacter... 192 8e-48 UniRef50_B9XNI6 Recombination protein RecR n=1 Tax=bacterium Ell... 183 4e-45 UniRef50_B0TY95 Recombination protein recR n=18 Tax=Francisella ... 179 7e-44 UniRef50_A9HZ10 Recombination protein recR n=9 Tax=Burkholderial... 177 2e-43 UniRef50_B2TR53 Recombination protein recR n=5 Tax=Firmicutes Re... 174 1e-42 UniRef50_C9KLD0 Recombination protein RecR n=1 Tax=Mitsuokella m... 174 2e-42 UniRef50_P74533 Recombination protein recR n=254 Tax=cellular or... 172 9e-42 UniRef50_B1YGD0 Recombination protein recR n=96 Tax=Bacteria Rep... 171 1e-41 UniRef50_Q04NX9 Recombination protein recR n=6 Tax=Leptospira Re... 170 2e-41 UniRef50_A0L8F5 Recombination protein recR n=5 Tax=Proteobacteri... 170 2e-41 UniRef50_D2NPN6 Recombinational DNA repair protein n=8 Tax=Bacte... 170 3e-41 UniRef50_C7M1M5 Recombination protein RecR n=1 Tax=Acidimicrobiu... 169 6e-41 UniRef50_Q3A7K8 Recombination protein recR n=8 Tax=Bacteria RepI... 169 7e-41 UniRef50_B5YKY1 Recombination protein RecR n=1 Tax=Thermodesulfo... 168 1e-40 UniRef50_C0QUF6 Recombination protein RecR n=4 Tax=Aquificales R... 167 2e-40 UniRef50_Q1IY76 Recombination protein recR n=172 Tax=Bacteria Re... 166 3e-40 UniRef50_A4QAN3 Recombination protein recR n=14 Tax=Corynebacter... 166 6e-40 UniRef50_D0LUK9 Recombination protein RecR n=3 Tax=Bacteria RepI... 165 9e-40 UniRef50_Q7UQ68 Recombination protein recR n=3 Tax=Planctomyceta... 164 2e-39 UniRef50_Q74GZ7 Recombination protein recR n=2 Tax=Deltaproteoba... 163 3e-39 UniRef50_A5FRM7 Recombination protein recR n=22 Tax=Bacteria Rep... 162 7e-39 UniRef50_A3ZPF3 Recombinant protein RecR n=3 Tax=Planctomycetace... 162 8e-39 UniRef50_C2D9P1 Recombination protein RecR n=1 Tax=Atopobium vag... 160 2e-38 UniRef50_B4D3F8 Recombination protein RecR n=1 Tax=Chthoniobacte... 160 2e-38 UniRef50_C7GZD8 Recombination protein RecR n=1 Tax=Eubacterium s... 160 3e-38 UniRef50_A5G9K4 Recombination protein recR n=2 Tax=Deltaproteoba... 159 5e-38 UniRef50_A6DLE7 Recombination protein RecR n=1 Tax=Lentisphaera ... 159 5e-38 UniRef50_B2S0G5 Recombination protein RecR n=4 Tax=Borrelia RepI... 159 5e-38 UniRef50_A6LBX7 Recombination protein recR n=84 Tax=cellular org... 158 1e-37 UniRef50_Q8RG96 Recombination protein recR n=12 Tax=Fusobacteria... 158 1e-37 UniRef50_A1BFN2 Recombination protein recR n=17 Tax=Bacteria Rep... 157 2e-37 UniRef50_O83969 Recombination protein recR n=3 Tax=Treponema Rep... 156 3e-37 UniRef50_Q115W2 DNA replication and repair protein RecR n=5 Tax=... 156 4e-37 UniRef50_A1HM03 Recombination protein RecR n=5 Tax=Bacteria RepI... 155 5e-37 UniRef50_C3RP48 Recombination protein recR n=6 Tax=Bacteria RepI... 155 7e-37 UniRef50_A7NFA0 Recombination protein recR n=7 Tax=Bacteria RepI... 155 8e-37 UniRef50_Q0EXX1 Recombination protein RecR n=1 Tax=Mariprofundus... 153 3e-36 UniRef50_C2CG29 Recombination protein RecR n=4 Tax=Clostridiales... 153 3e-36 UniRef50_B1GZS8 Recombination protein recR n=1 Tax=uncultured Te... 153 4e-36 UniRef50_Q73FZ1 Recombination protein recR n=14 Tax=Rickettsiale... 152 6e-36 UniRef50_B2KES1 Recombination protein RecR n=1 Tax=Elusimicrobiu... 152 6e-36 UniRef50_C6HVG6 Recombination protein RecR n=1 Tax=Leptospirillu... 152 8e-36 UniRef50_B0S0K8 Recombination protein recR n=2 Tax=Finegoldia ma... 152 8e-36 UniRef50_Q2LYF5 Recombination protein recR n=3 Tax=Bacteria RepI... 152 9e-36 UniRef50_C7RH59 Recombination protein RecR n=2 Tax=Anaerococcus ... 151 1e-35 UniRef50_A4BJR1 Recombination protein RecR n=1 Tax=Reinekea blan... 151 2e-35 UniRef50_A8ZU38 Recombination protein recR n=2 Tax=Desulfobacter... 150 3e-35 UniRef50_A1AKR3 Recombination protein recR n=3 Tax=Desulfuromona... 149 5e-35 UniRef50_D2MMY3 Recombination protein RecR n=1 Tax=Bulleidia ext... 149 5e-35 UniRef50_Q1Q3A9 Strongly similar to recombination protein RecR n... 148 9e-35 UniRef50_D1VUH0 Recombination protein RecR n=1 Tax=Peptoniphilus... 148 1e-34 UniRef50_B0VGB5 Recombination protein RecR n=1 Tax=Candidatus Cl... 148 1e-34 UniRef50_D1R5I7 Putative uncharacterized protein n=1 Tax=Parachl... 147 2e-34 UniRef50_C7N9F2 Recombination protein RecR n=6 Tax=Fusobacteriac... 147 2e-34 UniRef50_Q2RZH8 Recombination protein recR n=1 Tax=Salinibacter ... 147 2e-34 UniRef50_Q38YT8 Recombination protein recR n=11 Tax=Bacteria Rep... 146 3e-34 UniRef50_B3DWR4 Recombinational DNA repair protein RecR n=1 Tax=... 146 3e-34 UniRef50_Q6MAF1 Recombination protein recR n=1 Tax=Candidatus Pr... 146 4e-34 UniRef50_Q0B0W3 Recombination protein recR n=1 Tax=Syntrophomona... 145 6e-34 UniRef50_D0W4J6 Recombination protein RecR n=3 Tax=Neisseriaceae... 144 2e-33 UniRef50_UPI00016B25D7 recombination protein RecR n=1 Tax=candid... 142 4e-33 UniRef50_O67455 Recombination protein recR n=3 Tax=Aquificales R... 142 6e-33 UniRef50_UPI000174441B recombination protein RecR n=1 Tax=Verruc... 140 2e-32 UniRef50_A9NE31 Recombination DNA repair protein n=1 Tax=Acholep... 140 4e-32 UniRef50_C8P1Z7 Recombination protein RecR n=1 Tax=Erysipelothri... 138 8e-32 UniRef50_C9RQ73 Recombination protein RecR n=1 Tax=Fibrobacter s... 138 1e-31 UniRef50_C1TMJ9 Recombination protein RecR n=3 Tax=Synergistacea... 136 5e-31 UniRef50_Q03ZG8 Recombination protein recR n=31 Tax=Firmicutes R... 135 8e-31 UniRef50_Q045U7 Recombination protein recR n=130 Tax=Firmicutes ... 135 1e-30 UniRef50_B4U725 Recombination protein RecR n=1 Tax=Hydrogenobacu... 134 2e-30 UniRef50_B3R068 Recombination protein recR n=1 Tax=Candidatus Ph... 134 3e-30 UniRef50_Q0BVJ5 Recombination protein recR n=184 Tax=Bacteria Re... 133 3e-30 UniRef50_B8DQU5 Recombination protein recR n=13 Tax=Desulfovibri... 132 5e-30 UniRef50_Q1MPV5 Recombinational DNA repair protein (RecF pathway... 132 8e-30 UniRef50_B5Y7S4 Recombination protein RecR n=1 Tax=Coprothermoba... 131 2e-29 UniRef50_D1B5E4 Recombination protein RecR n=1 Tax=Thermanaerovi... 130 3e-29 UniRef50_B7CCG8 Putative uncharacterized protein n=1 Tax=Eubacte... 128 1e-28 UniRef50_D0RR34 Recombination protein RecR n=1 Tax=alpha proteob... 128 1e-28 UniRef50_C1QBW2 Recombination protein RecR n=1 Tax=Brachyspira m... 128 1e-28 UniRef50_Q3KMC2 Recombination protein recR n=12 Tax=Chlamydiacea... 127 2e-28 UniRef50_B2UKM6 Recombination protein RecR n=1 Tax=Akkermansia m... 127 2e-28 UniRef50_A8EUC6 Recombination protein RecR n=6 Tax=Campylobacter... 127 2e-28 UniRef50_Q4FNA8 Recombination protein recR n=5 Tax=root RepID=RE... 125 6e-28 UniRef50_C0QZV8 Recombination protein recR n=1 Tax=Brachyspira h... 125 7e-28 UniRef50_D1NBH0 Recombination protein RecR n=1 Tax=Victivallis v... 125 9e-28 UniRef50_B9L9M2 Recombination protein RecR n=1 Tax=Nautilia prof... 124 1e-27 UniRef50_Q5PB75 Recombination protein recR n=5 Tax=Anaplasma Rep... 124 3e-27 UniRef50_Q8EUW2 Recombinational DNA repair protein RecR n=1 Tax=... 123 4e-27 UniRef50_A5CCA2 Recombination protein recR n=17 Tax=Rickettsieae... 121 1e-26 UniRef50_Q17WX2 Recombination protein recR n=17 Tax=Helicobacter... 121 1e-26 UniRef50_A9GQA8 DNA repair and genetic recombination protein n=2... 121 1e-26 UniRef50_C3XMA4 Recombination protein RecR n=3 Tax=Helicobacter ... 121 1e-26 UniRef50_Q30R19 DNA replication and repair protein RecR n=4 Tax=... 120 3e-26 UniRef50_A1W0P8 Recombination protein recR n=21 Tax=Epsilonprote... 117 2e-25 UniRef50_B1AI75 Recombination protein recR n=15 Tax=Ureaplasma R... 115 6e-25 UniRef50_B1ZW44 Recombination protein RecR n=3 Tax=Verrucomicrob... 115 1e-24 UniRef50_Q7NAN7 RecR n=2 Tax=Mycoplasma gallisepticum RepID=Q7NA... 110 3e-23 UniRef50_Q4JSL5 Recombination protein recR n=8 Tax=Corynebacteri... 108 9e-23 UniRef50_Q2STA5 DNA repair protein RecM n=5 Tax=Mollicutes RepID... 108 1e-22 UniRef50_Q6KIL5 Recombination protein n=1 Tax=Mycoplasma mobile ... 108 1e-22 UniRef50_Q14QH4 Putative recombination protein recr dna repair n... 107 2e-22 UniRef50_Q98RF8 Recombination protein recR n=1 Tax=Mycoplasma pu... 106 5e-22 UniRef50_C8PFQ8 Recombination protein RecR n=1 Tax=Campylobacter... 103 5e-21 UniRef50_B1VIS4 Recombination protein n=1 Tax=Corynebacterium ur... 100 5e-20 UniRef50_Q4A6Z7 Putative recombination protein n=1 Tax=Mycoplasm... 100 5e-20 UniRef50_A5IZC7 Recombination protein RecR n=1 Tax=Mycoplasma ag... 94 2e-18 UniRef50_C4XFW1 Putative uncharacterized protein n=1 Tax=Mycopla... 93 6e-18 UniRef50_D1J7N4 Recombination protein recR n=1 Tax=Mycoplasma ho... 84 3e-15 UniRef50_Q4A8A7 Recombination protein recR n=4 Tax=Mycoplasma Re... 79 9e-14 UniRef50_B3PM36 Recombination protein RecR n=1 Tax=Mycoplasma ar... 79 1e-13 UniRef50_D0GR72 Putative uncharacterized protein n=1 Tax=Vibrio ... 41 0.028 >UniRef50_C4K7W2 Recombination protein recR n=48 Tax=Bacteria RepID=RECR_HAMD5 Length = 202 Score = 301 bits (770), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 145/201 (72%), Positives = 168/201 (83%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQTS ++ LME+LR LPGVGPKSAQRMAF LLQ DRS G+RLA++L +AMSEIGHC C Sbjct: 1 MQTSLVIEALMESLRHLPGVGPKSAQRMAFYLLQSDRSKGIRLAESLLKAMSEIGHCGVC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 RTFTEQ C+ICSN R++ GQICVVESP+DI AIEQTGQFSGRYFVLMG LSPLDGIGP Sbjct: 61 RTFTEQPCCDICSNVYREKMGQICVVESPSDICAIEQTGQFSGRYFVLMGRLSPLDGIGP 120 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 DDIGL LE RL+ E I EVILA NPTVEGEAT+NYIA++C +Y + ++IAHGVP+GG+ Sbjct: 121 DDIGLPLLEHRLSTEPIKEVILAMNPTVEGEATSNYIAQMCEEYGISTTKIAHGVPIGGD 180 Query: 181 LEMVDGTTLSHSLAGRHKIRF 201 LEMVD TTLSH+L GR + F Sbjct: 181 LEMVDETTLSHALVGRRPMNF 201 >UniRef50_Q5ZRX0 Recombination protein recR n=10 Tax=Gammaproteobacteria RepID=RECR_LEGPH Length = 199 Score = 228 bits (581), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 106/190 (55%), Positives = 138/190 (72%), Gaps = 1/190 (0%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L++L+EALRCLPGVGPKSAQRM F LLQ R G+ LA L +AM I HC C +TEQ Sbjct: 6 LSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCNNYTEQ 65 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 +C +C NP R ++ +CVVESPAD+ AIEQ+ F G+YFVLMG +SPLDG+GPDDIGL Sbjct: 66 TLCALCQNPNR-DSTLLCVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLP 124 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 +L++ + EKI EVILA +P+VE + T ++I +L V S++AHG+P GGELE +DG Sbjct: 125 KLKELITREKIQEVILALSPSVESQTTIHFIHQLLKDETVNISQLAHGIPSGGELEFLDG 184 Query: 187 TTLSHSLAGR 196 T+S +L R Sbjct: 185 NTISSALKNR 194 >UniRef50_UPI0000E87F50 recombination protein RecR n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87F50 Length = 198 Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 101/199 (50%), Positives = 144/199 (72%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ + +L L++AL+CLPGVGPKSA R+A+ LLQR+R G L+Q+++ A+ ++GHC C Sbjct: 1 MKDTEVLQSLVDALKCLPGVGPKSALRLAYYLLQRNRKGADTLSQSISNALEQLGHCKLC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 FTEQEVC ICS+ +R + IC+VE P+D+ +EQT + G YFVLMG LSPLDG+GP Sbjct: 61 NDFTEQEVCKICSSQKRDVH-TICIVEMPSDLLMMEQTHSYKGMYFVLMGRLSPLDGVGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 +I LDRL +R+ +I E+ILATN T EG ATA YI EL +++ +RIA G+P+GGE Sbjct: 120 KEIHLDRLIERIKSSEIREIILATNFTAEGNATAQYIKELLKGAEIKMTRIARGLPMGGE 179 Query: 181 LEMVDGTTLSHSLAGRHKI 199 +E +D TL+ ++ R ++ Sbjct: 180 IEYIDSGTLAQAVVERKQL 198 >UniRef50_A5EY33 Recombination protein recR n=2 Tax=Gammaproteobacteria RepID=RECR_DICNV Length = 201 Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 97/196 (49%), Positives = 138/196 (70%), Gaps = 1/196 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M SP L++AL CL GVG K+AQRMA LL + + LA+ALT A++ + C C Sbjct: 1 MSFSPSFDALVQALTCLSGVGKKTAQRMALDLLLKKNAEAATLAKALTTALATVQRCRYC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 R ++ EVC +C++P R QICVVE+PAD+ AIEQ + G +FVLMGH++PLDG+GP Sbjct: 61 RNLSDAEVCLLCADPLRNRQ-QICVVETPADVIAIEQATDYRGLFFVLMGHIAPLDGMGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + +G+D L+ RLA E I+E++LATN T+EGE TA ++AEL A++ ++A+R+A+GVP+G E Sbjct: 120 EALGMDILDDRLANEAISELVLATNATLEGETTAYFLAELAAKHGIQATRLAYGVPLGSE 179 Query: 181 LEMVDGTTLSHSLAGR 196 L +D TL H+ R Sbjct: 180 LSYIDKQTLHHAFQSR 195 >UniRef50_Q12B97 Recombination protein recR n=671 Tax=Proteobacteria RepID=RECR_POLSJ Length = 208 Score = 201 bits (512), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 108/208 (51%), Positives = 139/208 (66%), Gaps = 13/208 (6%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M S L L +ALR LPGVG KSA RMAF LLQ D+ G +++A+AL A++ + HC C Sbjct: 1 MADSNALEGLTQALRKLPGVGVKSAARMAFHLLQHDKPGALQIARALEHAVNSVRHCTLC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T TEQEVC C+NP+R + ++CVVE+PAD A+E+T + G YFVLMG LSPLDGIGP Sbjct: 61 NTLTEQEVCATCANPQR-DRSKLCVVETPADQAALERTLAYRGLYFVLMGKLSPLDGIGP 119 Query: 121 DDIGLDRLEQRL------------AEEKITEVILATNPTVEGEATANYIAELCAQYDVEA 168 +DIGL +L R+ A ++ EVILATN T EGEATA+ IA+ V+ Sbjct: 120 NDIGLQKLFDRVVPRDEHGEPLPPASREVQEVILATNFTAEGEATAHVIAQALKSRGVQV 179 Query: 169 SRIAHGVPVGGELEMVDGTTLSHSLAGR 196 +R+A GVPVG ELE VD T++H+L R Sbjct: 180 TRLARGVPVGSELEYVDLGTIAHALVDR 207 >UniRef50_Q4FTL1 Recombination protein recR n=3 Tax=Gammaproteobacteria RepID=RECR_PSYA2 Length = 197 Score = 195 bits (495), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 95/188 (50%), Positives = 132/188 (70%), Gaps = 1/188 (0%) Query: 9 QLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEV 68 QL++ LR LPGVG KSAQRMA LL + R GM LAQAL AM +I C C +F++ V Sbjct: 8 QLVKQLRILPGVGQKSAQRMALHLLTKKRPQGMALAQALDEAMRDIVECQRCHSFSDDAV 67 Query: 69 CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRL 128 C +C +PRR ++ +CVVE+ AD+ AIEQT + GRYFVL GHLSP+DGI DD+ +++L Sbjct: 68 CPLCQDPRR-DDALLCVVETAADVMAIEQTAGYRGRYFVLGGHLSPIDGISADDLNIEQL 126 Query: 129 EQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDGTT 188 R+ +E + E+ILAT TVEG+ TA++I E +++ + +R+A GVP+GGELE +D T Sbjct: 127 VWRVKQEPVEELILATGTTVEGQTTAHFINEAVSRHVNKVTRLAQGVPMGGELEYLDSMT 186 Query: 189 LSHSLAGR 196 L ++ R Sbjct: 187 LGQAMQNR 194 >UniRef50_C8PX50 Recombination protein RecR n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PX50_9GAMM Length = 202 Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 95/201 (47%), Positives = 136/201 (67%), Gaps = 6/201 (2%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 +P +L++ L+ LPGVGPKSAQRMA LL R G L +AL AM +I C CR Sbjct: 3 TPKFDELVKQLKVLPGVGPKSAQRMALHLLSYKRPQGQALGEALIVAMHDIKQCQVCRGL 62 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 +++++C ICS+PRR E +C+VE+ AD+ AIEQT F+G+YFVL GHLSP+DGIG + + Sbjct: 63 SDEDICPICSDPRRNER-VLCIVETAADMMAIEQTAGFNGKYFVLGGHLSPIDGIGVEQL 121 Query: 124 GLDRL-----EQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVG 178 G+++L + + A+ + E+ILAT+ TVEG+ TA++I+E Y SRIA G+P+G Sbjct: 122 GINQLIGLLKQHQAAQTPVEEIILATSTTVEGQTTAHFISEAVKPYVTHISRIAQGIPMG 181 Query: 179 GELEMVDGTTLSHSLAGRHKI 199 GELE +D TL +L R ++ Sbjct: 182 GELEYLDSMTLGQALQNRGRL 202 >UniRef50_B9XNI6 Recombination protein RecR n=1 Tax=bacterium Ellin514 RepID=B9XNI6_9BACT Length = 200 Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 93/193 (48%), Positives = 130/193 (67%), Gaps = 1/193 (0%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 +T L L LPG+GP+SA+R+A L+Q D S +LAQ L A I C C + TEQ Sbjct: 8 ITTLTGILSRLPGIGPRSAERLALHLVQSDVSEVKQLAQILVEARERIQTCPICGSLTEQ 67 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 C+ICS+ RR + G IC+VE P DI +IE++G F GRY VL G +SPL+G+GP+D+ + Sbjct: 68 TPCSICSDERR-DGGLICLVERPTDIISIEKSGTFHGRYHVLGGKISPLNGVGPEDLRIS 126 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 LE RL++E I E+++A VEG+AT+NY+A+ A+ + SRIAHG+P G LE D Sbjct: 127 ELESRLSQEPIKEIVVALGTDVEGDATSNYLAKKLARPGLRISRIAHGLPAGSGLEFADE 186 Query: 187 TTLSHSLAGRHKI 199 TL+H+LAGR ++ Sbjct: 187 LTLTHALAGRREM 199 >UniRef50_B0TY95 Recombination protein recR n=18 Tax=Francisella RepID=RECR_FRAP2 Length = 201 Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 90/197 (45%), Positives = 134/197 (68%), Gaps = 2/197 (1%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 SP +T ++E+LR LP +G KS+QR+A LL + + +A +L A I C C++ Sbjct: 7 SPKITAVIESLRKLPTIGKKSSQRLALYLLDKSPETAITIANSLLDAAENIKKCKYCQSL 66 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 TE++VC+IC + R E+ ++C++ES D+ AIE+ G F G+YFVL G +SPLDGIGP+++ Sbjct: 67 TEKDVCDICGSQNRDES-KLCIIESMLDLVAIEEAGFFKGKYFVLNGRISPLDGIGPNEL 125 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 LD LEQ + +I E+ILA +PTVEGE TA++I+++ + D++ SRI GVP GGELE Sbjct: 126 KLDILEQIIINREINEIILAISPTVEGETTAHFISQMIGK-DIKISRIGFGVPFGGELEY 184 Query: 184 VDGTTLSHSLAGRHKIR 200 +D TL H+ R I+ Sbjct: 185 LDQQTLIHAFNARTNIK 201 >UniRef50_A9HZ10 Recombination protein recR n=9 Tax=Burkholderiales RepID=RECR_BORPD Length = 202 Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 89/190 (46%), Positives = 128/190 (67%), Gaps = 1/190 (0%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L L+EALR LPGVG +SA+RMA+ L+Q D G L +AL A+ + HCA C +FTE Sbjct: 11 LVSLIEALRRLPGVGVRSARRMAYHLMQHDLQGADMLGRALAGAVQNLRHCARCNSFTED 70 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 ++C C+NP+R + +CVVE+PAD IE + + G Y+VLMG ++PL+GIGP ++ Sbjct: 71 DICATCANPKRDPS-VLCVVETPADQNMIEASHGYRGLYYVLMGRVAPLEGIGPRELDFQ 129 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 RL +R ++ + EVILATN T EGE TA+++ E+ A ++ +R+A GVP G ELE VD Sbjct: 130 RLLERASDGVVREVILATNFTAEGETTAHFLGEVLAGKGLKVTRLARGVPAGSELEYVDA 189 Query: 187 TTLSHSLAGR 196 T++ +L R Sbjct: 190 GTIAWALMER 199 >UniRef50_B2TR53 Recombination protein recR n=5 Tax=Firmicutes RepID=RECR_CLOBB Length = 198 Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 91/200 (45%), Positives = 125/200 (62%), Gaps = 3/200 (1%) Query: 1 MQTSPL-LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCAD 59 M+ P+ + +L+E LP +G K+AQR+A +L A AL +A I +C+ Sbjct: 1 MEFYPVAIEKLIEEFAKLPSIGKKTAQRLALHILNLPNDEVREFATALVKARGTIKYCST 60 Query: 60 CRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 C FT+ + C +CSNP R + ICVVE P DI +E+ +F+G Y VL G++SP+ G G Sbjct: 61 CGNFTDTDPCALCSNPNR-DKSTICVVEQPKDIMTMEKVKEFNGLYHVLHGNISPMQGRG 119 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 P DI + L R+ EE EVILATNP +EGEATA YIA++ DV+ +RIA G+PVGG Sbjct: 120 PQDIKIRELVARMNEEA-KEVILATNPNIEGEATAMYIAKVLKPLDVKVTRIAAGIPVGG 178 Query: 180 ELEMVDGTTLSHSLAGRHKI 199 +LE D TLS +L GR +I Sbjct: 179 DLEYADEVTLSKALEGRKEI 198 >UniRef50_C9KLD0 Recombination protein RecR n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLD0_9FIRM Length = 198 Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 88/199 (44%), Positives = 125/199 (62%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ L L+E R LPG+G K+A R+A+ +L D + LA A+ A +IG+C C Sbjct: 1 MQYIAPLANLIEHFRALPGIGQKTAVRLAYHVLDMDPAQARALASAIIDAKEKIGYCNTC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 ++Q C IC++ R ++ ICVVE P D+ A+E+ + G Y VL G LSPL+GIGP Sbjct: 61 FNLSDQNPCAICASDER-DHSVICVVEQPQDVAAMERMRDYQGVYHVLHGALSPLEGIGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 DI + L RL ++ + EVI+ATNP VEGEAT YIA+L ++ +RIAHG+P+GG+ Sbjct: 120 SDIRIKELLGRLQDDTVKEVIMATNPNVEGEATTMYIAKLLKPLGIKVTRIAHGLPIGGD 179 Query: 181 LEMVDGTTLSHSLAGRHKI 199 LE D TL+ ++ R +I Sbjct: 180 LEYADEVTLAKAMENRREI 198 >UniRef50_P74533 Recombination protein recR n=254 Tax=cellular organisms RepID=RECR_SYNY3 Length = 232 Score = 172 bits (435), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 87/196 (44%), Positives = 130/196 (66%), Gaps = 2/196 (1%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 +P L +L+E L+ LP VGPK+AQR+A LL+R + LAQAL A +G C C Sbjct: 39 TPPLARLIEQLQRLPSVGPKTAQRLALHLLKRPDAEVENLAQALLDAKKRVGQCQVCFHL 98 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 + + VC+IC +P+R +N ICVV P D+ A+E+T +F G+Y VL G +SP+DGIGP+ + Sbjct: 99 SAEPVCDICRHPQR-DNSVICVVSDPRDVIALEKTREFRGKYHVLGGVISPMDGIGPEQL 157 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 + L R+++ +I EVILA +P+VEGE T Y+ +L + + +RIA G+P+GG+LE Sbjct: 158 TIQPLLHRVSQPEIKEVILAISPSVEGETTTLYLGKLLQPF-TKVTRIAFGLPMGGDLEY 216 Query: 184 VDGTTLSHSLAGRHKI 199 D TL+ +L GR ++ Sbjct: 217 ADEVTLARALEGRREL 232 >UniRef50_B1YGD0 Recombination protein recR n=96 Tax=Bacteria RepID=RECR_EXIS2 Length = 199 Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 84/200 (42%), Positives = 128/200 (64%), Gaps = 2/200 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ +++L+E+ LPG+GPK+A R+AF +L + + +AL A +I +C+ C Sbjct: 1 MQYPEAISRLIESFTKLPGIGPKTAVRLAFHVLDMEEDDVLMFGKALVSAKRDISYCSIC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T+++ C +CS+ R +CVV+ D+ A+E+ + G Y VL G +SP++GIGP Sbjct: 61 GNITDKDPCYVCSDKHRNRT-IVCVVQDSRDVIAMEKMRDYQGLYHVLHGAISPMEGIGP 119 Query: 121 DDIGLDRLEQRL-AEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 +DI + L RL A+E ITE+ILATNP +EGEATA Y++ L + +RIAHG+PVGG Sbjct: 120 EDINVSSLLTRLQADEAITEIILATNPNIEGEATAMYLSRLLKPTGIRVTRIAHGLPVGG 179 Query: 180 ELEMVDGTTLSHSLAGRHKI 199 +LE D TLS ++ GR ++ Sbjct: 180 DLEYADEVTLSRAMEGRREL 199 >UniRef50_Q04NX9 Recombination protein recR n=6 Tax=Leptospira RepID=RECR_LEPBJ Length = 197 Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 82/191 (42%), Positives = 125/191 (65%), Gaps = 1/191 (0%) Query: 6 LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTE 65 LL ++++AL LPG+G KSA R++F LL+ ++ LT ++I C C ++ E Sbjct: 5 LLEEMVDALSSLPGIGRKSAFRISFHLLRLEQGHFNHFIHQLTNTKNKIKFCKRCGSYAE 64 Query: 66 QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGL 125 E+CNIC++ +R + CVVE P DI+ IE T +F G+Y VL G +SPL+GIGP D+ + Sbjct: 65 TEICNICTSEKR-DTHTFCVVEQPEDIFFIENTREFHGKYHVLNGVISPLEGIGPKDLRI 123 Query: 126 DRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVD 185 L +R+ E+I EV++ATNPT+EG+ATA+Y+A V+ +RIA+G+ VGG +E+ D Sbjct: 124 KELLERIEPEQIKEVLVATNPTLEGDATADYLASQLKPLSVDVTRIAYGITVGGSIELAD 183 Query: 186 GTTLSHSLAGR 196 TL ++ R Sbjct: 184 QYTLGRAIRSR 194 >UniRef50_A0L8F5 Recombination protein recR n=5 Tax=Proteobacteria RepID=RECR_MAGSM Length = 200 Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 89/195 (45%), Positives = 122/195 (62%), Gaps = 1/195 (0%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 P L + +E LPGVG KSAQRM + LL+ L Q L I C C Sbjct: 6 PTLERSIELFSRLPGVGRKSAQRMVYHLLKEGGREATLLGQGLLALSERIHFCEVCHNLA 65 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 E+ +C IC + +R ++G ICVVE P D+ A+E+ G + G Y VL G LSP+DGIGPD + Sbjct: 66 EEGLCAICQDSKR-DHGLICVVEEPVDVLAMERAGAYRGLYHVLGGRLSPMDGIGPDALY 124 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 LD L +RL + + E+I+ATNPTV GEATA+YI +L ++ SR+A+G+P+GGELE + Sbjct: 125 LDALLERLQQGGVRELIIATNPTVAGEATAHYITQLAQPLTIDISRLAYGMPMGGELEYL 184 Query: 185 DGTTLSHSLAGRHKI 199 D +TL +L GR + Sbjct: 185 DESTLFQALQGRRGV 199 >UniRef50_D2NPN6 Recombinational DNA repair protein n=8 Tax=Bacteria RepID=D2NPN6_9MICC Length = 384 Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 86/193 (44%), Positives = 124/193 (64%), Gaps = 1/193 (0%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 + L++ L LPGVGPKSAQR+AF +L D + RLA A++ + + C +C +E Sbjct: 6 VQNLIDELGRLPGVGPKSAQRIAFHILNADAADMARLANAISTVKTSVSFCEECGNVSET 65 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 ++C IC + RR + +CVVE D+ AIE+T F+GRY VL G ++PL G+GP+ + + Sbjct: 66 KLCTICRDERR-DPSVLCVVEESKDVVAIERTRSFTGRYHVLGGAINPLAGVGPEQLRIR 124 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 L RLA+E+I E+ILA +P +EGEATA Y++ + V SR+A G+PVGG+LE D Sbjct: 125 ELVSRLADERIQEIILAMDPNLEGEATATYLSRMLVPLGVRLSRLASGLPVGGDLEYADE 184 Query: 187 TTLSHSLAGRHKI 199 TL +L GR I Sbjct: 185 ITLGRALEGRRVI 197 >UniRef50_C7M1M5 Recombination protein RecR n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M1M5_ACIFD Length = 205 Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 92/193 (47%), Positives = 118/193 (61%), Gaps = 2/193 (1%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 P L L+E L LPG+GPKSAQR+A L+ R + RLA L A +G C C Sbjct: 6 PTLDALIEELGRLPGIGPKSAQRIALALIVRGPAAAHRLADVLVTATERLGRCDRCGALA 65 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 E C IC +P R + VVE D++A E+ +F G Y VL G +SP+DG+GPDD+ Sbjct: 66 EGARCPICDDPARDPR-IVLVVEGDRDVWAFERARRFRGTYHVLGGVISPMDGVGPDDLA 124 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 + RL R+ E I EV++AT+PTVEGE TA Y+A + A V SR+A GVPVGGELE V Sbjct: 125 IGRLIARVEAEPIEEVVVATSPTVEGETTATYLARVLAGR-VGVSRLATGVPVGGELEYV 183 Query: 185 DGTTLSHSLAGRH 197 D TL+ +L GR Sbjct: 184 DELTLARALEGRR 196 >UniRef50_Q3A7K8 Recombination protein recR n=8 Tax=Bacteria RepID=RECR_PELCD Length = 199 Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 82/199 (41%), Positives = 128/199 (64%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 ++ +P +L+ LPG+G K+A R+ +L++ + L +A+ C+ C Sbjct: 2 VKFTPSFNRLVGEFAKLPGIGRKTAVRLTLFMLRQTSQDALALGEAVRELKERTRFCSRC 61 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 FTE++ C +C++ R ++ ICVVE P D+ AIE++ F GRY VL G LSPLDGIGP Sbjct: 62 FYFTEEDPCPLCTDVGR-DDQLICVVEEPQDVIAIERSRSFRGRYHVLHGSLSPLDGIGP 120 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 DD+ +D L +RL + + EV+LATN VEGEATA Y+A++ + V+ +R+AHG+P G + Sbjct: 121 DDLKIDALLERLQQNNVKEVLLATNFDVEGEATALYLAKVIQPFGVKVTRLAHGIPTGSD 180 Query: 181 LEMVDGTTLSHSLAGRHKI 199 LE VD T++H++ GR ++ Sbjct: 181 LEYVDEATVNHAVEGRREL 199 >UniRef50_B5YKY1 Recombination protein RecR n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKY1_THEYD Length = 197 Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 82/194 (42%), Positives = 126/194 (64%), Gaps = 2/194 (1%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L L+E L LPG+G K+AQR+AF ++ + + +A+A+ + C+ C TE Sbjct: 5 LENLIENLCKLPGIGRKTAQRLAFFIMNMPENEALEIAEAIINLKKKAKFCSVCFNITEN 64 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 E CNICSN R ++ ICVVE P++I E+TG + G Y VL G++SP+DG+ PD + + Sbjct: 65 EKCNICSNSIR-DHSIICVVEEPSNIILFEKTG-YKGVYHVLGGNISPVDGLTPDKLKIK 122 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 LE+R+ +I EVI++T+P +GE TA +IA+L +Y+V+ SRIA+G+P+G ++E D Sbjct: 123 ELEERVKTGQIREVIISTSPNTKGELTAQWIADLLKKYNVKISRIAYGLPIGIDIEFADE 182 Query: 187 TTLSHSLAGRHKIR 200 TLS +L GR + Sbjct: 183 VTLSKALEGRKPVN 196 >UniRef50_C0QUF6 Recombination protein RecR n=4 Tax=Aquificales RepID=C0QUF6_PERMH Length = 202 Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 87/192 (45%), Positives = 124/192 (64%), Gaps = 3/192 (1%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L + +E + LPG G KSA+R A LL R +++ + L + +I C++C +TE+ Sbjct: 11 LKEAVEKISELPGYGEKSAKRFAVNLLDMPRGEAIQIIKTLFDMLEKIHPCSECGLYTEE 70 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 E+C+ICS+ R + ICVVE D +AIE+TG+F G Y V+ G LSPL+GI +D+ ++ Sbjct: 71 EICSICSSEER-DRSVICVVEETFDAFAIEKTGKFKGVYHVIGGRLSPLEGITAEDLNIE 129 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 +L +R+ + + E+ILATNPTVEGEATA+YI L DV SRIA+G+P G LE D Sbjct: 130 KLVERVDKNGVKEIILATNPTVEGEATASYIHNLLKDRDVIISRIAYGLPFGAVLENADD 189 Query: 187 TTLSHSLAGRHK 198 TLS +L HK Sbjct: 190 FTLSKAL--EHK 199 >UniRef50_Q1IY76 Recombination protein recR n=172 Tax=Bacteria RepID=RECR_DEIGD Length = 222 Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 90/199 (45%), Positives = 125/199 (62%), Gaps = 3/199 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ P L L+ L LPG+GPKSAQR+AF L ++ R RLA A+ A ++ C C Sbjct: 1 MKYPPSLVGLIRELSRLPGIGPKSAQRLAFYLFEQPREDIERLAGAILEAKRDLHTCPVC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T+ E C++CS+P R ++ ICVVE P D+ AIE++G++ G Y VL G LSP++G+GP Sbjct: 61 FNITDAERCDVCSDPTRDQS-VICVVEEPGDVIAIERSGEYRGLYHVLHGALSPMNGVGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 D + + L R+ + EVILAT TVEG+ATA Y+ L SRIA+G+PVGG Sbjct: 120 DRLQIRPLLPRVQDG--MEVILATGTTVEGDATALYLQRLLEPLGAVVSRIAYGLPVGGA 177 Query: 181 LEMVDGTTLSHSLAGRHKI 199 LE D TL +L+GR ++ Sbjct: 178 LEYADEVTLGRALSGRRRV 196 >UniRef50_A4QAN3 Recombination protein recR n=14 Tax=Corynebacterineae RepID=RECR_CORGB Length = 218 Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 97/214 (45%), Positives = 126/214 (58%), Gaps = 22/214 (10%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L L++ L LPGVGPKSAQR+AF LL D + RL +AL + C C + + Sbjct: 6 LQDLIDELSRLPGVGPKSAQRIAFHLLNVDPTDITRLQEALGGVRDGVQFCRICCNISRE 65 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 EVC ICS+ R + G ICVVE P DI IE+TG+FSGRY VL G L PL IGP ++ + Sbjct: 66 EVCRICSDSGR-DGGTICVVEEPKDIQVIERTGEFSGRYHVLGGALDPLANIGPRELNIS 124 Query: 127 RLEQRL--------------------AEEKITEVILATNPTVEGEATANYIAELCAQY-D 165 L QR+ A + EVILAT+P EGEATA+Y+ L + D Sbjct: 125 TLLQRIGGVLPDRELADSTPENKLFDATPTVREVILATDPNTEGEATASYLGRLLKDFPD 184 Query: 166 VEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKI 199 + SR+A G+P+GG+LE VD TLS +L+GR +I Sbjct: 185 LVVSRLASGMPLGGDLEFVDELTLSRALSGRLQI 218 >UniRef50_D0LUK9 Recombination protein RecR n=3 Tax=Bacteria RepID=D0LUK9_HALO1 Length = 201 Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 88/198 (44%), Positives = 126/198 (63%), Gaps = 6/198 (3%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 + +L++ L LPG+G K+A R+AF L++ S LAQ L + + C+ C T+ Sbjct: 5 IKRLVQHLARLPGIGEKTATRLAFHLIRSPASQVKDLAQTLVEVIEQTVLCSVCANITQD 64 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 + C IC +P R E ICVV +P+D+ AI++ G F GR+ VL G LSPL+GIGP+D+ +D Sbjct: 65 DPCVICRDPGR-EASAICVVSNPSDVVAIDRGGHFRGRFHVLHGVLSPLEGIGPEDLRID 123 Query: 127 RLEQRL-----AEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGEL 181 L +RL E +I E+I+AT+ VEGEATA Y+A L ++ SRIA G+PVGGEL Sbjct: 124 ELLKRLQTPAAGEPEIDEIIVATSANVEGEATAMYLARLIKPLNIRVSRIASGIPVGGEL 183 Query: 182 EMVDGTTLSHSLAGRHKI 199 E D T++ +LAGR + Sbjct: 184 EYSDQATIARALAGRSPL 201 >UniRef50_Q7UQ68 Recombination protein recR n=3 Tax=Planctomycetaceae RepID=RECR_RHOBA Length = 199 Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 75/193 (38%), Positives = 127/193 (65%), Gaps = 1/193 (0%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 ++ L++ L LPG+G KSA+R+AF LL+ + LA A+ R +++ +C+ C +E Sbjct: 8 VSDLVDQLSKLPGIGRKSAERLAFHLLRVHEDEALALASAIRRVRTDVRYCSVCYNLSET 67 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 E+C ICS+P+R ++CVVE P D+ +++ +G +SG Y VL+G ++PLDGI PD + +D Sbjct: 68 ELCRICSDPKRDAT-RLCVVEQPRDLLSLDASGVYSGLYHVLLGRIAPLDGITPDQLTID 126 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 L +R+ +E+I+ATNPTVEG+ T+ Y++ L ++ VE +R+A G+ G LE + Sbjct: 127 SLVERVRTGNFSEIIMATNPTVEGDGTSLYLSNLMQEFPVEITRLARGITSGSVLEYANR 186 Query: 187 TTLSHSLAGRHKI 199 ++ +L GR ++ Sbjct: 187 EIIADALTGRQRL 199 >UniRef50_Q74GZ7 Recombination protein recR n=2 Tax=Deltaproteobacteria RepID=RECR_GEOSL Length = 197 Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 86/193 (44%), Positives = 123/193 (63%), Gaps = 3/193 (1%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L++L+ L+ LPGVG K+A R+AF LL+ + LA +L MS + C+ C TE Sbjct: 8 LSRLLAELQKLPGVGEKTALRLAFHLLKSPDNAAA-LADSLRDVMSRVRFCSVCFGITED 66 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 + C CS+ R ++G ICVVE P D+ A+E+T F GRY VL G LSPL+G+ PD + + Sbjct: 67 DPCRFCSDAR--DDGAICVVEEPQDLLAVERTRAFRGRYHVLQGALSPLNGVTPDRLRVA 124 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 L +RL + EV++ATN TVEGEATA Y+A + V +R+AHG+P+G +LE VD Sbjct: 125 ELMKRLEGGGVREVVIATNFTVEGEATALYLARMIKPLGVRVTRLAHGIPLGSDLEFVDA 184 Query: 187 TTLSHSLAGRHKI 199 T+ +L GR ++ Sbjct: 185 ATVQRALEGRSEL 197 >UniRef50_A5FRM7 Recombination protein recR n=22 Tax=Bacteria RepID=RECR_DEHSB Length = 204 Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 81/197 (41%), Positives = 121/197 (61%), Gaps = 1/197 (0%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 T+ ++ +L+++L LPG+GPKSAQR+AF L++ + L+ + ++I C C Sbjct: 9 TAGVVNKLIDSLGKLPGIGPKSAQRLAFYLMRAPEDQVISLSDTIRNIKNQISQCRICCN 68 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 + E+C IC N +R+ N +ICVVE P DI A+E G + G Y VL G +SP +GI + Sbjct: 69 VADSELCPICQNTKRETN-KICVVEQPQDILALEHVGVYRGYYHVLHGAISPTEGITSQN 127 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 I ++ L RL ++ E+ILATNPT EGEATA Y++ L ++ +R+A G+P G ELE Sbjct: 128 IRINELMVRLDNGQVEEIILATNPTTEGEATAMYLSRLITPLGIKVTRLARGLPFGTELE 187 Query: 183 MVDGTTLSHSLAGRHKI 199 D TLS ++ GR Sbjct: 188 YADDVTLSRAMEGRQNF 204 >UniRef50_A3ZPF3 Recombinant protein RecR n=3 Tax=Planctomycetaceae RepID=A3ZPF3_9PLAN Length = 199 Score = 162 bits (409), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 77/199 (38%), Positives = 125/199 (62%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 +QT+ +T+L++ LPG+G KSA+R+A+ +L+ S + LA ++ + +C+ C Sbjct: 2 VQTTDSVTRLVDEFAKLPGIGRKSAERLAYHILRVHESEALALADSIRTVKQNVRYCSQC 61 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 E E+C +C + RR + +C+VE P D+ A+EQ+G F G Y VL+G ++PL+GIGP Sbjct: 62 FNLAESELCTVCQDTRRDQT-LLCIVEQPRDLMALEQSGMFPGLYHVLLGRIAPLEGIGP 120 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 D + +D L R+ K E+I+ATNPT EG+ TA +I+ L A+ V +R+A G+ G Sbjct: 121 DQLTIDALVDRVRAGKFREIIMATNPTTEGDGTALHISNLLAELPVTLTRLARGITSGSV 180 Query: 181 LEMVDGTTLSHSLAGRHKI 199 LE + L+ +L+GR K+ Sbjct: 181 LEFTNKEILADALSGRQKL 199 >UniRef50_C2D9P1 Recombination protein RecR n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9P1_9ACTN Length = 200 Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 79/183 (43%), Positives = 117/183 (63%), Gaps = 1/183 (0%) Query: 17 LPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEVCNICSNPR 76 LPG+GPKSAQR+A+ L++ D RL++A+ + C C + +VC +C++ Sbjct: 19 LPGIGPKSAQRIAYFLMEADDETARRLSRAILNLKEHVHFCPVCFAYATDDVCALCNDST 78 Query: 77 RQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEK 136 R + ++CVV P DI +IE+TG + G Y VL G +SP+D IGP+ + + L RLA ++ Sbjct: 79 R-DVSKVCVVCEPRDIASIEKTGVYHGLYHVLGGVISPMDKIGPEQLHVKELLARLAGDE 137 Query: 137 ITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGR 196 I EVILA NPTVEGE TA Y+A ++ +R+A G+PVGG+LE VD TL ++ R Sbjct: 138 IKEVILAMNPTVEGETTATYLARTIKTLGIQTTRLASGLPVGGDLEYVDEVTLGRAIEAR 197 Query: 197 HKI 199 H++ Sbjct: 198 HEM 200 >UniRef50_B4D3F8 Recombination protein RecR n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3F8_9BACT Length = 203 Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 82/191 (42%), Positives = 119/191 (62%), Gaps = 1/191 (0%) Query: 10 LMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEVC 69 L+ L+ LPG+GP+SA+R+A +LQ + + +++ + I C C FT +C Sbjct: 13 LIGELKRLPGIGPRSAERIALWMLQSRDARPLEVSRVIREVQESIHACPRCGFFTTDTLC 72 Query: 70 NICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLE 129 IC++ R + QICVVE P DI +E+TG F GRY L G +SPLD +GP+++ +D L Sbjct: 73 EICADTTR-DAAQICVVEQPTDILPLERTGVFLGRYHALGGRISPLDHVGPEELRIDALI 131 Query: 130 QRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDGTTL 189 +R+ E +E+ILA VEGEATANY+A L + V +R+A G+P GG LE D TL Sbjct: 132 ERIKAEAPSEIILALGSDVEGEATANYLATLLRELPVTVTRLAQGLPAGGGLEQADELTL 191 Query: 190 SHSLAGRHKIR 200 S +LAGR ++ Sbjct: 192 SRALAGRTAVK 202 >UniRef50_C7GZD8 Recombination protein RecR n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZD8_9FIRM Length = 198 Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 79/199 (39%), Positives = 125/199 (62%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ L+ L LPG+G K+AQR+A + + + + +++A+ A++ + C C Sbjct: 1 MQFPVYFENLITELSRLPGIGRKTAQRLAIFITDMEDNKALSISRAIEEAVNNLKPCDTC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T+ C CS+P R ++ ICVVE+ DI A+E+ + GRY VL G +SPLDGIGP Sbjct: 61 GCLTDNGKCLFCSDPLRNDD-VICVVENTIDIVAMEKLKNYRGRYHVLGGVISPLDGIGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 D + +D L R+ + + EVILAT+ T+EGEATANYIA+ + ++A+RIA G+PVGG+ Sbjct: 120 DHLRIDTLLSRVVKYDVKEVILATSVTIEGEATANYIAKELEKLGIKATRIAKGIPVGGK 179 Query: 181 LEMVDGTTLSHSLAGRHKI 199 + +D T+ +++ R ++ Sbjct: 180 FDYIDAMTMQNAIDKREEM 198 >UniRef50_A5G9K4 Recombination protein recR n=2 Tax=Deltaproteobacteria RepID=RECR_GEOUR Length = 197 Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 83/199 (41%), Positives = 123/199 (61%), Gaps = 3/199 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 + S LT+L+ L+ LP VG K+A R+AF LL+ + LA++L + C+ C Sbjct: 2 LHISRSLTKLLGELKKLPSVGDKTALRLAFHLLKSPENLSA-LAKSLLEVRDGVRFCSTC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 TE + C++C+ PR ++ ICVVE P DI A+E++ F GRY VL G LSPL+G+ P Sbjct: 61 FGITESDPCHLCTTPR--DDASICVVEEPQDILAMERSQAFKGRYHVLHGALSPLNGVTP 118 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + + L QRL + EV+LATN TVEGEATA Y+ L ++ +R+AHG+P+G + Sbjct: 119 GQLRIAELLQRLENGSVKEVLLATNFTVEGEATALYLTRLIKPLSIKVTRLAHGIPIGSD 178 Query: 181 LEMVDGTTLSHSLAGRHKI 199 LE VD T+ ++ GR ++ Sbjct: 179 LEYVDAATVQRAVEGRSEL 197 >UniRef50_A6DLE7 Recombination protein RecR n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DLE7_9BACT Length = 200 Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 76/194 (39%), Positives = 121/194 (62%), Gaps = 2/194 (1%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 Q +E + LPG+G K A+++A L S A + ++ +CA C F+++ Sbjct: 8 FQQAIETIASLPGIGKKGAEKLALALYSWPESKLKHFASLIDSMQHDLHNCAQCGFFSQK 67 Query: 67 E-VCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGL 125 + +C ICS+P+R N QICVVE + + IE++G F G Y VL G LSP+ GIGPDDI + Sbjct: 68 DALCPICSDPKRL-NHQICVVEQVSQLPVIEKSGSFKGLYHVLHGKLSPMSGIGPDDINI 126 Query: 126 DRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVD 185 D L QR E ++EVILAT+ +EG+ATA++IA+L ++ + +RIA G+P+G +L D Sbjct: 127 DSLLQRCKENHVSEVILATSTDIEGQATASFIAKLLNEHGINTTRIAQGIPIGADLNYAD 186 Query: 186 GTTLSHSLAGRHKI 199 +++ ++ R ++ Sbjct: 187 AASIAMAINSRREL 200 >UniRef50_B2S0G5 Recombination protein RecR n=4 Tax=Borrelia RepID=B2S0G5_BORHD Length = 194 Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 79/196 (40%), Positives = 115/196 (58%), Gaps = 5/196 (2%) Query: 6 LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTE 65 ++ L+ + LPG+G K+A RM + +L + L Q L+ S I C +C F E Sbjct: 2 IIQDLIVLVSKLPGIGKKTASRMVYDILYKGEEYAKNLGQILSNLHSSIRKCKNCYNFAE 61 Query: 66 QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGL 125 +E C+IC + R +N ICVVE P D+ IE TG++ G YFVL GHL PL IGP+ + L Sbjct: 62 EEFCDICMDLSRNKN-VICVVEMPQDLEVIESTGEYDGFYFVLHGHLDPLKDIGPNRLNL 120 Query: 126 DRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVD 185 D+LE + + EVI+AT ++EG+ TANYI+ + D+ +RIA G+PVGG + D Sbjct: 121 DKLEGYVGALEAQEVIIATEFSIEGDVTANYISSILKNLDINVTRIASGLPVGGSISNAD 180 Query: 186 GTTLSHSLAGRHKIRF 201 T +L ++RF Sbjct: 181 KMTTLRAL----RLRF 192 >UniRef50_A6LBX7 Recombination protein recR n=84 Tax=cellular organisms RepID=RECR_PARD8 Length = 208 Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 83/193 (43%), Positives = 117/193 (60%), Gaps = 1/193 (0%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 S LL + L LPGVG K+A R+A +L+RD A AL ++ +C C Sbjct: 7 SALLENAVNELASLPGVGRKTALRLALYMLRRDVGYTENFAAALVALRRDVKYCKVCHNI 66 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 + EVC+IC+NP R ++ +CVVE+ ++ AIE TGQF G Y VL G +SP+DGIGP D+ Sbjct: 67 CDDEVCSICANPSR-DHSLVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGIGPGDL 125 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 +D L +R+AE ++ E+ILA + T+EG+ T +I + YDV S IA GV +G E+E Sbjct: 126 RIDSLVRRVAEGEVKEIILALSTTMEGDTTNFFIYRKLSGYDVRISVIARGVSIGDEIEY 185 Query: 184 VDGTTLSHSLAGR 196 D TL S+ R Sbjct: 186 ADEITLGRSIINR 198 >UniRef50_Q8RG96 Recombination protein recR n=12 Tax=Fusobacteriaceae RepID=RECR_FUSNN Length = 197 Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 79/193 (40%), Positives = 117/193 (60%), Gaps = 1/193 (0%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L +L+ LPGVG KSA R AF +L + A+AL + C C + E Sbjct: 6 LERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHVCGNYCES 65 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 + CNICS+ R ++ ICVVE DI +E+T +F G Y VL G L PL+GI P+++ + Sbjct: 66 DTCNICSDNAR-DHRIICVVEESKDIMILEKTTKFRGVYHVLNGRLDPLNGITPNELNIK 124 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 L +R+A++ I E+ILATNP +EGE TA Y+A+L + ++ +++A G+P+GG LE D Sbjct: 125 SLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLEFSDT 184 Query: 187 TTLSHSLAGRHKI 199 T+S +L R +I Sbjct: 185 ATISRALDDRIEI 197 >UniRef50_A1BFN2 Recombination protein recR n=17 Tax=Bacteria RepID=RECR_CHLPD Length = 205 Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 124/200 (62%), Gaps = 7/200 (3%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 TS + L++ LPG+G K+AQR+ +L R+ +LA+AL + C++C+ Sbjct: 4 TSGAIETLIDEFARLPGIGRKTAQRLCMHMLNEPRTAAEKLAKALLDVKDRVIRCSECQN 63 Query: 63 FTEQEV--CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T+++ C +C + R + ICVVESP D+ A E+TG + G Y VL G +SPLDGIGP Sbjct: 64 VTDRDSDPCVLCRSSGR-DRTVICVVESPVDLLAFEKTGHYKGLYHVLHGVISPLDGIGP 122 Query: 121 DDIGLDRLEQRLA--EE--KITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVP 176 DDI + L R++ EE ++ EV+LA NPTVEGE T+ YI+ L + S+IA G+P Sbjct: 123 DDIKVRELLARVSRPEESLQVREVVLALNPTVEGETTSLYISRLLKPLGIAVSKIARGIP 182 Query: 177 VGGELEMVDGTTLSHSLAGR 196 VG ELE +D TLS ++ GR Sbjct: 183 VGAELEFIDEATLSRAMEGR 202 >UniRef50_O83969 Recombination protein recR n=3 Tax=Treponema RepID=RECR_TREPA Length = 201 Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 80/195 (41%), Positives = 121/195 (62%), Gaps = 1/195 (0%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 P + +++E L LPG+G K A R+A+ LL+RD + LA+ + + C C F Sbjct: 3 PAIEEVVEHLSRLPGIGVKLATRLAYHLLKRDPAEAQVLARGIACLHERVYRCVCCGAFC 62 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 E C +C++ R + G ICVVE D+ + G++ G + VL G ++PL+G+GPD + Sbjct: 63 EGRTCALCTDASR-DRGIICVVERAQDVEMMAGVGEYRGLFHVLGGVIAPLEGVGPDQLR 121 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 + L +RL E + EVILA NPTVEG+ TA Y+ ++ A + V +R+A G+PVGG+LE + Sbjct: 122 IAALLKRLQESSVREVILALNPTVEGDTTALYVQKILANFPVIVTRLASGIPVGGDLEYI 181 Query: 185 DGTTLSHSLAGRHKI 199 D TTL+HSL GR + Sbjct: 182 DRTTLAHSLRGRRPL 196 >UniRef50_Q115W2 DNA replication and repair protein RecR n=5 Tax=Bacteria RepID=Q115W2_TRIEI Length = 182 Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 77/183 (42%), Positives = 121/183 (66%), Gaps = 2/183 (1%) Query: 17 LPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEVCNICSNPR 76 +PGVGPK+AQR+A +++R + LA+AL A +IG C C + + +C IC NP+ Sbjct: 1 MPGVGPKTAQRLALYIIKRPEAEIQALAEALVDARKKIGLCQKCFHLSAEPICEICRNPQ 60 Query: 77 RQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEK 136 R + ICVV D+ A+E+T ++ G+Y VL G +SP+DGIGP+ + + L +R+++E Sbjct: 61 RDKE-VICVVCDSRDLIALEKTREYKGQYHVLGGVISPMDGIGPEQLSIQPLVRRVSQEN 119 Query: 137 ITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGR 196 I EVI+A +P+VEGE T Y+ +L + + +RIA G+P+GG+LE D TL+ +L GR Sbjct: 120 IQEVIIAISPSVEGETTTLYVGQLLRPF-TKVTRIAFGLPMGGDLEYADELTLARALEGR 178 Query: 197 HKI 199 ++ Sbjct: 179 QEL 181 >UniRef50_A1HM03 Recombination protein RecR n=5 Tax=Bacteria RepID=A1HM03_9FIRM Length = 171 Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 80/172 (46%), Positives = 111/172 (64%), Gaps = 1/172 (0%) Query: 28 MAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQENGQICVVE 87 MA+ +L+ D+ LAQA+ A ++G+C+ C T+ + C +C R + ICVVE Sbjct: 1 MAYHVLEMDKDEAQALAQAILDAKEKVGYCSVCFNLTDCDPCQVCQAEGR-DRTVICVVE 59 Query: 88 SPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPT 147 P D+ A+E+T ++ G Y VL G LSPLDG+GPD + L L QRL + + EVI+ATNP Sbjct: 60 DPRDVEAMERTREYRGLYHVLHGALSPLDGVGPDQLRLAELLQRLRQGDVREVIMATNPN 119 Query: 148 VEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKI 199 VEGEATA YIA L V+ +RIAHG+PVGG+LE D TL+ +L R ++ Sbjct: 120 VEGEATAMYIARLLKPLGVKVTRIAHGLPVGGDLEYADEVTLAKALENRREL 171 >UniRef50_C3RP48 Recombination protein recR n=6 Tax=Bacteria RepID=C3RP48_9MOLU Length = 197 Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 77/199 (38%), Positives = 122/199 (61%), Gaps = 2/199 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M L++ + LPG+G KSA+R+A+ +L D+ + A+ ++I +C C Sbjct: 1 MNYPQAFQDLVDCFKRLPGIGGKSAERLAYHVLSMDKKYVDEFSAAIGSIQTKIHYCKKC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 E E+C+IC +P R + IC+VE P D++A+E+ ++ G Y VL G +S +DG Sbjct: 61 GHICEGEICDICQDPDRDQT-TICIVEDPKDVFAMEKVKEYHGLYHVLHGAMSIMDGKTM 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 DD+ + L +RL ++ I EVI+ATNPT +GE TA Y+A+L ++ ++ SRIA+G+P+G Sbjct: 120 DDLNIASLFERL-DDSIKEVIIATNPTRDGETTALYLAKLLSKKNINTSRIANGLPIGSN 178 Query: 181 LEMVDGTTLSHSLAGRHKI 199 ++ D TL SL GR KI Sbjct: 179 IDYADELTLLKSLEGRKKI 197 >UniRef50_A7NFA0 Recombination protein recR n=7 Tax=Bacteria RepID=RECR_ROSCS Length = 205 Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 82/193 (42%), Positives = 117/193 (60%), Gaps = 1/193 (0%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 + +L+E L LPGVGPK+A R+ F LL+ LA AL ++ C+ C T+ Sbjct: 14 VIRLIEELSRLPGVGPKTASRLTFFLLRAPDELPRALANALIGLKQQVQLCSRCYFITQN 73 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 ++C IC+NP R + +CVVE P D+ AIE+TG + G Y VL G ++PL+G+ +DI D Sbjct: 74 DLCAICANPARDQR-IVCVVEEPLDVVAIERTGVYRGLYHVLHGRIAPLEGMNREDIYFD 132 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 L R+ E I EVI+ATNP +EGEATA ++ A +R+A G+P GG+LE D Sbjct: 133 ELLDRVRAEPIDEVIIATNPNLEGEATAFHLQRALAPLGARVTRLARGLPTGGDLEWADP 192 Query: 187 TTLSHSLAGRHKI 199 TL +L GR ++ Sbjct: 193 GTLGSALEGRREM 205 >UniRef50_Q0EXX1 Recombination protein RecR n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXX1_9PROT Length = 204 Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 87/190 (45%), Positives = 119/190 (62%), Gaps = 2/190 (1%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L +++E L LPGVGPK+A RM LL R LAQAL ++G C C F+EQ Sbjct: 10 LARVVEMLSSLPGVGPKTAMRMGLNLLTRPAGDAAALAQALECLHEQVGFCPVCGCFSEQ 69 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 C+ C +P R + +CVVE P D+ +E+ + G Y VL+G LSP+DG+GP+ + L Sbjct: 70 GHCHFCDDPSR-DAATLCVVEQPVDVLMMERGHGYRGSYHVLLGRLSPVDGVGPEQLRLA 128 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 L+QR+ ++ I E+ILAT+ TV+GEATA+Y+A V SRI+ GVP GGELE +D Sbjct: 129 SLDQRM-KQGINEIILATSATVDGEATAHYLANRYQHAGVSVSRISRGVPEGGELEYLDE 187 Query: 187 TTLSHSLAGR 196 TLS +L R Sbjct: 188 HTLSRALDQR 197 >UniRef50_C2CG29 Recombination protein RecR n=4 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2CG29_9FIRM Length = 201 Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 74/193 (38%), Positives = 119/193 (61%), Gaps = 1/193 (0%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L L++ + LP +G KSA+R+A +++ RD+ A++L S I C C TE+ Sbjct: 8 LVNLIDEFQKLPTIGRKSAERLAMSIVDRDKDSVDEFAKSLLEVKSRIHSCEICGNLTEE 67 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 ++C+IC + R E +C+VE ++ AIE++ + GRY VL G +SP D IGPD + +D Sbjct: 68 DICDICKDITRNEEC-LCIVEDVKNLIAIEKSHAYRGRYHVLGGLISPSDDIGPDKLNVD 126 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 +L +R+ +E I EVILA + T+EGE T+ ++ L + +V+ +++A G+PVG LE D Sbjct: 127 KLLERIDKEDIKEVILAISSTIEGETTSLFLTGLLSNKNVKITKLAQGIPVGSNLEYFDQ 186 Query: 187 TTLSHSLAGRHKI 199 TL +L R +I Sbjct: 187 LTLERALEDRREI 199 >UniRef50_B1GZS8 Recombination protein recR n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=RECR_UNCTG Length = 198 Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 73/191 (38%), Positives = 124/191 (64%), Gaps = 1/191 (0%) Query: 9 QLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEV 68 +++ ++ LPGVG K A+R+++ +L+ + RL ++ A + C+ C +E + Sbjct: 9 KMVGIIKKLPGVGHKMAERLSYHILKMPQVEVDRLIDSIQNARRTMKCCSICCNLSEHDP 68 Query: 69 CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRL 128 C ICS+ R++N +CVVE+P D+ A+ + + G YFVL G LSPLD +GPDDI +D+L Sbjct: 69 CPICSDVTREKN-IVCVVETPQDLIAVSKVEDYKGLYFVLGGALSPLDAVGPDDIRIDKL 127 Query: 129 EQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDGTT 188 +RL + I EVI+AT+ +GE TA Y+A++ ++ +R+ +G+PVGG++E D T Sbjct: 128 IKRLKRDSINEVIIATDADSKGEITAVYLADIIKILGIKVTRLGYGLPVGGDIEYADEIT 187 Query: 189 LSHSLAGRHKI 199 +S ++AGR ++ Sbjct: 188 ISRAIAGRKEM 198 >UniRef50_Q73FZ1 Recombination protein recR n=14 Tax=Rickettsiales RepID=RECR_WOLPM Length = 201 Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 76/192 (39%), Positives = 114/192 (59%), Gaps = 1/192 (0%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 + L+ A LP +GP S++R+ LLQ + LA + I C C + Sbjct: 5 IKNLVHAFSKLPSLGPSSSRRLVIHLLQNKEKVMLPLASLIKELADLIIECEVCGNLDTK 64 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 C+IC+NP+R + +CVVE D++A E+ +SG Y VL G LS ++GIGP ++ LD Sbjct: 65 SPCSICTNPKR-DTKLLCVVEELGDLWAFEKGNIYSGLYHVLGGRLSAINGIGPKELNLD 123 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 + +R+ E KI E+I+A NPT+EG+ TA YI EL DV+ SR+A G+P+GGE++ +D Sbjct: 124 TILKRVTESKIEEIIIAINPTLEGQVTAQYIIELLKNLDVKISRLACGIPMGGEIDYLDE 183 Query: 187 TTLSHSLAGRHK 198 TL +L R + Sbjct: 184 GTLRIALTSRQE 195 >UniRef50_B2KES1 Recombination protein RecR n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KES1_ELUMP Length = 197 Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 85/195 (43%), Positives = 119/195 (61%), Gaps = 3/195 (1%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 +L+ ALR LPGVGP+ A+R + L+ S AL+ I C+ C ++E Sbjct: 4 FDRLVRALRRLPGVGPRQAERFSAYFLKTSDSEIDEFINALSALRENIHLCSICFAYSED 63 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 VC+IC + R E ICVVE P DI AIE+TG F G Y VL G LSP+DG G ++I + Sbjct: 64 GVCDICEDSSR-ERDIICVVEDPQDIEAIEKTGAFKGLYHVLHGALSPIDGRGVENIKIR 122 Query: 127 RLEQRL--AEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 L +R+ ++ + EVI+AT+P EGE TA YIA+ + SRI +GVP+GG+L+ + Sbjct: 123 ELIERIHNSQTPVREVIIATDPDTEGETTALYIADALRGLVDKVSRIGYGVPLGGDLDYL 182 Query: 185 DGTTLSHSLAGRHKI 199 D TL++SL GR K+ Sbjct: 183 DEMTLTYSLKGRTKL 197 >UniRef50_C6HVG6 Recombination protein RecR n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVG6_9BACT Length = 215 Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 84/196 (42%), Positives = 116/196 (59%), Gaps = 9/196 (4%) Query: 10 LMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEV- 68 L++ R LPG+G K+A R+AF LLQ S LA A++ + C++CR Sbjct: 19 LVDLFRRLPGIGTKTATRLAFHLLQSSESERQELASAVSTLKERLLPCSECRNIVASPPP 78 Query: 69 -------CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 C IC +P R ++ + VVE +Y+IE++G+F GRY VL G LSPL+GI P+ Sbjct: 79 ESPEVPRCAICLDPAR-DSTILIVVEDIQTLYSIEKSGEFRGRYHVLEGRLSPLEGIAPE 137 Query: 122 DIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGEL 181 + + L QRL I EV+LAT+PT +GEATA Y++ L + SRIA G+PVG EL Sbjct: 138 MLRVRELLQRLENPDIREVVLATSPTTDGEATALYLSRLVKPLGIRVSRIAFGIPVGLEL 197 Query: 182 EMVDGTTLSHSLAGRH 197 E VD TL ++ GRH Sbjct: 198 EYVDEVTLIRAVEGRH 213 >UniRef50_B0S0K8 Recombination protein recR n=2 Tax=Finegoldia magna RepID=RECR_FINM2 Length = 202 Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 74/196 (37%), Positives = 123/196 (62%), Gaps = 3/196 (1%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 + +L++ L LP +G KSA+R+A+ ++ D L +++ + I CA+C T++ Sbjct: 8 MDELIKNLSNLPTIGRKSARRLAYRIIDMDPKKVDELVESIVNVKTNIRPCANCGNLTDK 67 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 ++C+ICS+ +R +N I VVE ++ +IE+TG+++G+Y VL G LSP D I P D+ L+ Sbjct: 68 KLCDICSDQKR-DNSVITVVEDSMNVISIEKTGEYNGKYHVLGGLLSPRDNIAPQDLNLE 126 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCA--QYDVEASRIAHGVPVGGELEMV 184 L R ++ + EVILA +PT G+ T N+I E+ +Y+V+ SRIA GVP+G LE Sbjct: 127 NLFLRCKKDYVKEVILALSPTTNGDLTTNFIIEVLKNEEYNVKVSRIAMGVPLGANLEYY 186 Query: 185 DGTTLSHSLAGRHKIR 200 D +L ++ R +I+ Sbjct: 187 DEMSLYKAILDRREIK 202 >UniRef50_Q2LYF5 Recombination protein recR n=3 Tax=Bacteria RepID=RECR_SYNAS Length = 203 Score = 152 bits (383), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 84/197 (42%), Positives = 116/197 (58%), Gaps = 2/197 (1%) Query: 1 MQTSPL-LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCAD 59 M PL + L+ L LPG+G K+A R+A +L+ LA ++ +I C Sbjct: 1 MAGYPLPIKHLISELGKLPGIGEKTATRLAMHILRAPEGDARALADSILEVRDKIRFCRV 60 Query: 60 CRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 C F+E E+C +C + R ++ QICVVE P + AIE +G +SG Y VL G LSPLDGIG Sbjct: 61 CYNFSEAELCTVCRDSAR-DSSQICVVEDPDALMAIEDSGSYSGTYHVLHGVLSPLDGIG 119 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 P+ + L L +R+ E + EVILATNP V G++TA I+ + V +RIA GVP+G Sbjct: 120 PEQLKLRELVERIRESGVREVILATNPNVSGDSTALLISRMIGPLAVTVTRIAQGVPMGS 179 Query: 180 ELEMVDGTTLSHSLAGR 196 +L +D TLS SL R Sbjct: 180 DLRYMDRMTLSKSLEFR 196 >UniRef50_C7RH59 Recombination protein RecR n=2 Tax=Anaerococcus RepID=C7RH59_ANAPD Length = 201 Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 73/193 (37%), Positives = 117/193 (60%), Gaps = 1/193 (0%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L L+E + LP +G KSA+R+A +++ D +++LT I C C TE Sbjct: 8 LQNLIEQFQKLPTIGRKSAERLAMAIVESDYKSVDDFSKSLTEVKDRIHACKICGNLTED 67 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 EVC+IC + R E +C+VE ++ AIE++ + G+Y VL G +SP DG+GPD + +D Sbjct: 68 EVCDICKDITRNEE-YLCIVEDVRNLIAIEKSHAYRGKYHVLGGLISPSDGLGPDQLNID 126 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 +L +R+ +E I EVILA + T+EGE T ++ L ++ +++ +++A G+PVG LE D Sbjct: 127 KLLERIEKENIEEVILAISSTIEGETTVLFLTNLLSERNIKITKLAQGIPVGSNLEYFDQ 186 Query: 187 TTLSHSLAGRHKI 199 TL +L R +I Sbjct: 187 LTLERALEDRREI 199 >UniRef50_A4BJR1 Recombination protein RecR n=1 Tax=Reinekea blandensis MED297 RepID=A4BJR1_9GAMM Length = 203 Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 78/201 (38%), Positives = 119/201 (59%), Gaps = 1/201 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M +P +L++AL+ LPGVG +SAQRMA LL+R+ G RL+ AL+ A++ + C C Sbjct: 1 MAFTPATEKLIQALQALPGVGVRSAQRMALQLLEREPETGQRLSSALSDALTLVHKCPQC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 RT TE ++C +C+NP R + ICVV S D IE + F GRYFVL G LSP+DGIGP Sbjct: 61 RTLTEDDLCGVCANPDR-DASVICVVASDVDRAGIEMSAAFQGRYFVLHGVLSPIDGIGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + +GL L + +++E++LA + +E EAT ++I E + + +R+ G Sbjct: 120 ETLGLVELVELARSGEVSEIMLALDDRLESEATVHFIKEQFKESGLTVTRVPFHQMKSGA 179 Query: 181 LEMVDGTTLSHSLAGRHKIRF 201 L+ D + +L + + F Sbjct: 180 LDQADSRVIEQALTQKQTLGF 200 >UniRef50_A8ZU38 Recombination protein recR n=2 Tax=Desulfobacteraceae RepID=RECR_DESOH Length = 199 Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 78/195 (40%), Positives = 114/195 (58%), Gaps = 1/195 (0%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 P + + L LPG+G K+A+R+A LL LA++L C+ C T + Sbjct: 6 PSIRNAISHLSRLPGIGQKTAERLAMHLLHVPDRAVHELARSLVDLKKNTRMCSVCFTLS 65 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 + VC IC +P R + +CVVE P ++ AIE+T F G Y VL G LSP+DGIGPDDI Sbjct: 66 DTPVCAICGDPDRNAS-LLCVVEGPTEVMAIEKTAAFKGVYHVLHGVLSPMDGIGPDDIR 124 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 + L R+ + + E++LAT+ VEGEATA Y+ E+ + V +RIA G+P GGE+ Sbjct: 125 IRELVDRVKKGIVKEIVLATDTRVEGEATAAYLVEVLKPFPVTVTRIASGMPAGGEVRYS 184 Query: 185 DGTTLSHSLAGRHKI 199 D TL +++ R+ + Sbjct: 185 DPVTLKNAMEKRYAL 199 >UniRef50_A1AKR3 Recombination protein recR n=3 Tax=Desulfuromonadales RepID=RECR_PELPD Length = 197 Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 81/200 (40%), Positives = 126/200 (63%), Gaps = 4/200 (2%) Query: 1 MQTSP-LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCAD 59 M T P L++L+ L+ LPGVG ++A R+AF LL+ ++ L+++L S + C+ Sbjct: 1 MLTKPSALSRLVGELKKLPGVGERTALRLAFHLLKTPQNL-TALSESLLEVKSRVRSCSI 59 Query: 60 CRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 C TE + C IC+ R + G ICVVE+ D+ A+E++ + G Y VL G +SPL GIG Sbjct: 60 CFAITEDDPCAICAGDR--DTGTICVVENSQDLMALERSNAYHGTYHVLEGVISPLAGIG 117 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 P ++ + L R+ + EV++ATN TVEGEATA Y+A+L + SR+AHG+P+G Sbjct: 118 PSELRIAELLARIGRGGVDEVVIATNFTVEGEATALYLAKLLKPLGIRISRLAHGIPLGS 177 Query: 180 ELEMVDGTTLSHSLAGRHKI 199 ++E VD T+ +L GR+++ Sbjct: 178 DIEYVDAATVQWALQGRNQL 197 >UniRef50_D2MMY3 Recombination protein RecR n=1 Tax=Bulleidia extructa W1219 RepID=D2MMY3_9FIRM Length = 200 Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 79/202 (39%), Positives = 125/202 (61%), Gaps = 5/202 (2%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ L L+E +R LPGVG K+A+R AF L + ++ + A A+ +++ +C C Sbjct: 1 MKYPDSLNHLIEMIRQLPGVGEKTAERYAFALYEMEKEEAIEFAHAIVNMKNKVKNCLIC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 +E+E C ICS+ +R ++ +I VV+SP DI AIE G++ G Y VL G +S GI P Sbjct: 61 GNMSEEEQCAICSSSKR-DHTKILVVQSPKDIIAIENMGEYDGVYHVLNGLISATKGILP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQY--DVEASRIAHGVPVG 178 +++ + L QR E + EVILAT+ T++GE T+ Y+ ++ Q ++ +RIAHG+P G Sbjct: 120 ENLKIKELIQRAKEAR--EVILATSATLDGETTSLYLTKVLDQEYPNLLVTRIAHGLPSG 177 Query: 179 GELEMVDGTTLSHSLAGRHKIR 200 L+ D TLSH+L+ R K++ Sbjct: 178 AMLDYADEMTLSHALSERRKVK 199 >UniRef50_Q1Q3A9 Strongly similar to recombination protein RecR n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3A9_9BACT Length = 215 Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 123/201 (61%), Gaps = 2/201 (0%) Query: 1 MQTSP-LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCAD 59 + T P + L+ +PG+G K+A+R+A +L++ M+LA A+ + C Sbjct: 15 LNTYPQTVNNLISEFGKMPGIGQKTAERLACYVLKQPVDDAMKLAYAIRDVKKYMKICTV 74 Query: 60 CRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 C +E C+ICSN RR ++ ICVVE AD+ IE+TG+++G Y +L GH+SPL+GI Sbjct: 75 CFNVSENSPCHICSNLRR-DSSIICVVEQFADLLTIEKTGKYNGHYHILQGHISPLEGID 133 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 PD + + RL QR+ + + EVILATN +EG+ TA YI + + V+ +RIA G+P G Sbjct: 134 PDLLTIGRLLQRVKDGSVKEVILATNLNMEGDITAVYIHKQLQSFGVKVTRIARGLPTGS 193 Query: 180 ELEMVDGTTLSHSLAGRHKIR 200 LE + ++ +++ R+++R Sbjct: 194 YLEYANTAIVADAVSDRNEMR 214 >UniRef50_D1VUH0 Recombination protein RecR n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUH0_9FIRM Length = 201 Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 120/194 (61%), Gaps = 2/194 (1%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 + QL+ L LPG+GPK+AQR+A+ ++ D+ LA ++ S++ C+ C ++ Sbjct: 8 IEQLIRNLTRLPGIGPKTAQRLAYHIIDMDKVEVEELADSIGTIKSKVKKCSLCCNISDT 67 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 + CNIC + R + ICVV+ P D+ A+E+T + G Y VL G +SPL G DI Sbjct: 68 DPCNICQDNNR-DKSTICVVQYPKDVDAMERTHTYKGLYHVLNGFISPLKGRTESDINFV 126 Query: 127 RLEQRLAEEK-ITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVD 185 L +R+ K I E+I+A++PTV+G+ TA+++ E +D++ +RI +G+PVGG+LE D Sbjct: 127 ELIKRVENNKEIKEIIIASSPTVDGDITASFLVEALKAFDLKVTRIGYGLPVGGDLEYYD 186 Query: 186 GTTLSHSLAGRHKI 199 T+S +L R ++ Sbjct: 187 EITISAALKNRREL 200 >UniRef50_B0VGB5 Recombination protein RecR n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VGB5_9BACT Length = 199 Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 119/200 (59%), Gaps = 1/200 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M S L +L+++ PG+G K+AQR+A+ L+ +D++ + LA+ + + C+ C Sbjct: 1 MLFSENLEKLIQSFNRFPGIGRKTAQRLAWYLVAQDKNFALNLAETIKTTVESFKTCSQC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 +E + C C +P R ++ +CVVE+ +DI +E +F GRYFVL LSPLDG GP Sbjct: 61 NMLSESDPCPFCISPDRSDS-YLCVVENSSDIQILEGMNEFKGRYFVLGHLLSPLDGYGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + I L +R+ +EVILA P+ EGEAT +Y+ EL + +R++ G+P GG+ Sbjct: 120 EQINTAMLLERIENLHPSEVILALKPSAEGEATIHYLWELLKDKGISITRLSTGIPFGGD 179 Query: 181 LEMVDGTTLSHSLAGRHKIR 200 LE + TL+++ R+ ++ Sbjct: 180 LEYSNLNTLANAWKRRYTVQ 199 >UniRef50_D1R5I7 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5I7_9CHLA Length = 200 Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 77/197 (39%), Positives = 118/197 (59%), Gaps = 1/197 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ L +L++ L+ LPGVG +SA+R AF L++ D L++ +I C+ C Sbjct: 1 MRYPSHLIKLIQVLKKLPGVGARSAERFAFQLMEWDEEKLREFGTILSQVPEKIQACSAC 60 Query: 61 RTFTEQEV-CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 E+ C C + RQ + +CV+ SP D+++IE+T ++ G Y VL G LSPLDG G Sbjct: 61 GCLKEEAGGCPFCDDLVRQASQILCVISSPRDVFSIEETREYKGLYHVLGGLLSPLDGFG 120 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 P+ + L L+ R+ +I EV++A T+EG+ATA YI V+ SR+A+G+PVG Sbjct: 121 PERLSLASLKGRIEIHQIHEVVIALGSTLEGDATALYIKRELGTLPVQVSRLAYGLPVGS 180 Query: 180 ELEMVDGTTLSHSLAGR 196 L+ VDG TL+ + +GR Sbjct: 181 SLDYVDGGTLARAFSGR 197 >UniRef50_C7N9F2 Recombination protein RecR n=6 Tax=Fusobacteriaceae RepID=C7N9F2_LEPBD Length = 198 Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 72/190 (37%), Positives = 116/190 (61%), Gaps = 2/190 (1%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L L++ LPG+G KSA R+AF +L++ + R+ + + + + I HC C +E Sbjct: 4 LDDLIDVFAKLPGIGRKSAARIAFDVLEKSEADIDRMLEIIKDSHTNIKHCEICGNLSEN 63 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 ++C IC+N +R + ICVVE D+ A E++ ++G Y VL G + PL+G+ +D+ L Sbjct: 64 DICEICANEKRDKE-VICVVEGVRDVIAFEKSETYNGLYHVLGGKIDPLNGVTIEDLNLM 122 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 +L +RL + + E+ILA NP +EGE T+ Y+ + +V+ S+IA G+P+GG +E D Sbjct: 123 KLMRRL-DGNVKEIILALNPDLEGETTSLYLTKFLKDKNVKISKIASGIPMGGNIEYTDM 181 Query: 187 TTLSHSLAGR 196 TL SL GR Sbjct: 182 ATLGRSLEGR 191 >UniRef50_Q2RZH8 Recombination protein recR n=1 Tax=Salinibacter ruber DSM 13855 RepID=RECR_SALRD Length = 237 Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 85/234 (36%), Positives = 123/234 (52%), Gaps = 38/234 (16%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 TS + L+E LP +G K+A+R+A +L+ + +A ALT ++ C+ C Sbjct: 4 TSESVETLVEQFTKLPTIGKKTARRLANYVLKMPQEEVETIANALTSVKEDVQRCSTCYV 63 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 +Q+ C IC + +R + ICVVE +D+ AIEQT ++ G Y VL G +SPLDG+GPDD Sbjct: 64 VADQDPCPICGSDKR-DASTICVVEESSDLTAIEQTNEYRGVYHVLGGVISPLDGVGPDD 122 Query: 123 IGLDRLEQRL-------------------------------------AEEKITEVILATN 145 + + L R+ AE + EVILA N Sbjct: 123 LRVHELATRIDPSFEDTAADAAPEPNTTPDGEADAEAPPSENGGADEAESGVDEVILAVN 182 Query: 146 PTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKI 199 P VEG+ TA YI++L +DV +RIA G+P+GG+LE D TLS +L GR + Sbjct: 183 PNVEGDTTAYYISQLLEPFDVRVTRIARGLPIGGDLEYADEATLSRALEGRGHV 236 >UniRef50_Q38YT8 Recombination protein recR n=11 Tax=Bacteria RepID=RECR_LACSS Length = 198 Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 117/199 (58%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ + +L+E+ LPG+G K+A R+AF + + A+ L A ++ +C+ C Sbjct: 1 MQYPEPIAKLIESYMKLPGIGNKTATRLAFYTIDMNEDDVTNFAKNLISARRDLHYCSVC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T+++ C IC + R + I VVE P D+ ++E+ + G Y VL G LSP++G GP Sbjct: 61 GNITDEDPCEICRDTARSQE-MILVVEQPKDVMSMERMNDYHGLYHVLHGVLSPIEGKGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 DDI + L +RL + EVI+ATN T EGEATA YI+ L ++ +R+AHG+ VG + Sbjct: 120 DDINIANLIKRLQKTPAKEVIIATNATPEGEATAMYISRLIKPAGIKVTRLAHGLAVGSD 179 Query: 181 LEMVDGTTLSHSLAGRHKI 199 +E D TL ++ GR +I Sbjct: 180 IEYADEMTLLKAVEGRQEI 198 >UniRef50_B3DWR4 Recombinational DNA repair protein RecR n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DWR4_METI4 Length = 199 Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 76/195 (38%), Positives = 118/195 (60%), Gaps = 1/195 (0%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 P + L+ +L+ LPG+GP+SA+R+ LL+ + +LAQ++ ++I C+ C +T Sbjct: 6 PAIQNLIHSLKELPGIGPRSAERITLYLLEETKGTKQKLAQSINEIGAKIKPCSRCGFYT 65 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 E+ +C+IC + R + C+V P D+ IE+TG F G Y VL +SPL+G P+D+ Sbjct: 66 EETLCSICLDHSRDKQC-FCLVIHPIDVIKIERTGAFRGVYHVLGKKISPLEGHVPEDLP 124 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 L L QR+ EEK E+ILA E EATA YI ++ + + S +A G+P G LE Sbjct: 125 LSPLLQRIDEEKPREIILAFGTDAEAEATALYIGQILKKRAIRVSSLAMGLPAGSGLEYA 184 Query: 185 DGTTLSHSLAGRHKI 199 D TLS++L+GR ++ Sbjct: 185 DSVTLSYALSGRREL 199 >UniRef50_Q6MAF1 Recombination protein recR n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=RECR_PARUW Length = 198 Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 121/199 (60%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ L +L+ L+ PGVG KSA+R AF LL + L++ + +I C +C Sbjct: 1 MRYPEHLLKLIHILKKFPGVGHKSAERFAFHLLNWPMEHLIELSETVKNTKDKIKQCLNC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T++ C C +R ++ ICV P D+++IE+T ++ G Y VL G LSPL+ GP Sbjct: 61 GCLTDEAACYFCDINQR-DSQIICVTAFPRDVFSIEETHEYRGLYHVLGGVLSPLENRGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + + + RL+ R+ + +I EV++A + T+EG+ATA ++ + A D++ SR+A G+P+G Sbjct: 120 EHLSISRLKHRIQDLQIKEVVIALDSTLEGDATALFLKQELAADDIQISRLAFGLPMGSS 179 Query: 181 LEMVDGTTLSHSLAGRHKI 199 L+ VDG TL+ +LAGR + Sbjct: 180 LDYVDGGTLARALAGRSRF 198 >UniRef50_Q0B0W3 Recombination protein recR n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RECR_SYNWW Length = 197 Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 122/199 (61%), Gaps = 2/199 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ + L L++ L LPG+GPK+AQR+A +L+ +LAQA+ ++ C+ C Sbjct: 1 MRLARPLENLIDQLLKLPGIGPKTAQRLALYILKLPEMEARQLAQAIVDCRQKVFPCSRC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T+ + C ICS+ R + IC+ E +D+ AIE+TG F G+YFVL + ++ G Sbjct: 61 GYLTDFDPCLICSDESR-DKSLICIGEESSDVIAIERTG-FRGQYFVLNKDFNLMEDKGL 118 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 +D+ L LE RLA +I EV+LA NP ++GE + ++A + + V+ +R+AHG+PVGG+ Sbjct: 119 EDLNLKPLEDRLATGEIKEVVLALNPDMDGEVMSRFLATVAGSFGVKVTRLAHGLPVGGD 178 Query: 181 LEMVDGTTLSHSLAGRHKI 199 +E D TL +L GR ++ Sbjct: 179 IEFADEITLRRALEGRKEL 197 >UniRef50_D0W4J6 Recombination protein RecR n=3 Tax=Neisseriaceae RepID=D0W4J6_NEICI Length = 206 Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 80/194 (41%), Positives = 119/194 (61%), Gaps = 1/194 (0%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 +L+ AL+ LP VGPKSAQR+A+ LLQ R L AL A+ ++ HC+ C TF E Sbjct: 10 FQRLIGALKVLPNVGPKSAQRIAYHLLQHKRKEAEELVDALQTALRQVDHCSMCNTFCEG 69 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 +C+IC++P R ++ +V PAD+ +E G YFVLMG ++ G+ I LD Sbjct: 70 GLCSICADPSRDVR-KLMIVHMPADVSNMEAANCHDGLYFVLMGQINTALGMDVSAIALD 128 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 +L +RL +E+I E+I+AT T EG ATA ++E + + SR++ G+P+GGELE VD Sbjct: 129 KLAERLKKEEIEEIIIATAFTAEGNATAFVLSEFFKKLPYKISRLSQGIPLGGELEYVDA 188 Query: 187 TTLSHSLAGRHKIR 200 TL+ ++ R I+ Sbjct: 189 GTLAQAVYERRLIK 202 >UniRef50_UPI00016B25D7 recombination protein RecR n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25D7 Length = 205 Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 77/199 (38%), Positives = 124/199 (62%), Gaps = 9/199 (4%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF--T 64 LT L++ L LPGVG ++A+R A+ LL+ RL+ ++ + + +C + Sbjct: 10 LTTLIDELGNLPGVGVRTAERYAYHLLRTKAESNKRLSNSIANLKANVKYCPATFALIDS 69 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 ++E+ + ++P R + I VVE P DI A+E+TGQ++G Y VL G +SP+D IGP+ + Sbjct: 70 DEEISPLYADPTRNKK-VIAVVEEPLDIIALERTGQYNGTYHVLGGVISPIDNIGPEQLH 128 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATA----NYIAELCAQYDVEASRIAHGVPVGGE 180 + L R+ ++++ E+I+ATN +VEGE+TA YI E + +V+ SR+A G+PVG + Sbjct: 129 IKELVIRIKQDEVEEIIIATNASVEGESTALFLQRYIKE--NEINVKMSRLARGLPVGVD 186 Query: 181 LEMVDGTTLSHSLAGRHKI 199 LE D TLSH+L GR + Sbjct: 187 LEYADQITLSHALEGRRSL 205 >UniRef50_O67455 Recombination protein recR n=3 Tax=Aquificales RepID=RECR_AQUAE Length = 211 Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 74/193 (38%), Positives = 115/193 (59%), Gaps = 3/193 (1%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L + +E ++ +P G + A R + LL+ ++ + + + A+ + C +C T++ Sbjct: 20 LKEALEGIKEIPTYGERGASRFMYNLLKLEKEKRKEIIEKVLEAVEVLRPCRECFLITDR 79 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 EVC ICS+ +R + ICVVE D YAIE+ ++ G Y VL GH++PL+GI +D+ +D Sbjct: 80 EVCPICSDEKRSKKF-ICVVEESQDAYAIEKLERYKGVYHVLQGHIAPLEGISAEDLTID 138 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQY--DVEASRIAHGVPVGGELEMV 184 L +R+ + + EVILATNP VEGEATANYIA L + V+ +R A+G G +E V Sbjct: 139 ALMERIKKYQPKEVILATNPNVEGEATANYIAGLIRRKFPAVKITRTAYGFQFGSLIEFV 198 Query: 185 DGTTLSHSLAGRH 197 D +L S+ R Sbjct: 199 DEYSLEKSMENRK 211 >UniRef50_UPI000174441B recombination protein RecR n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174441B Length = 202 Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 78/194 (40%), Positives = 120/194 (61%), Gaps = 2/194 (1%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 + +L+ ++ LPG+G +SA+R+ ++ R + LA+AL + +G C +C F E+ Sbjct: 10 IRELILQMKSLPGIGQRSAERLVLWMMGRGHARAAELARALAQLEQRVGICPECGFFIER 69 Query: 67 EV-CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGL 125 + C +C + +RQ +CVVE AD+ +E++G FSG+Y VL G LSPLD I P D+ + Sbjct: 70 DAACGLCQSDKRQTT-VVCVVEQAADVLRLERSGAFSGQYHVLGGRLSPLDNITPSDLRI 128 Query: 126 DRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVD 185 L R+ EVILA + VEGEATANY+A++ V+ +R+A G+P GG L+ VD Sbjct: 129 RELAARVPALGAEEVILALSADVEGEATANYLADILRPLGVKVTRLAQGMPAGGGLDHVD 188 Query: 186 GTTLSHSLAGRHKI 199 TL H+L+GR + Sbjct: 189 EMTLHHALSGRRAM 202 >UniRef50_A9NE31 Recombination DNA repair protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NE31_ACHLI Length = 195 Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 106/193 (54%), Gaps = 3/193 (1%) Query: 6 LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTE 65 ++ +L++ L+ LPG+G K+A+R+A L D L + I C C T+ Sbjct: 5 IILELIDDLKKLPGIGEKTAERLALHLTNWDSEDLKHFGTHLIELKTNISFCDICGLLTD 64 Query: 66 QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGL 125 +C+IC + + + QI VV D++AIE+T F G Y VL G + GI P D+ Sbjct: 65 DHICSICKDETKDKT-QIMVVSDSKDVFAIEKTKTFHGNYHVLNGLIDFSKGIEPKDLNF 123 Query: 126 DRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVD 185 D+L R+ + I E+I+ATN VEGE TA YI L D+ SR+ +G+PVG +L+ D Sbjct: 124 DKLTNRVKD--IKEIIIATNSNVEGELTAQYIKSLYKDLDLTISRLGYGLPVGADLKYAD 181 Query: 186 GTTLSHSLAGRHK 198 TL+ ++ R K Sbjct: 182 QLTLTKAVENRQK 194 >UniRef50_C8P1Z7 Recombination protein RecR n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1Z7_ERYRH Length = 196 Score = 138 bits (348), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 77/195 (39%), Positives = 119/195 (61%), Gaps = 5/195 (2%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L QL+E+ LPGVG K+A+R A ++L + + +Q LT A +EI C C +++ Sbjct: 6 LEQLIESFMMLPGVGQKTAERYALSILDQQTQDVDKFSQDLTIARNEIQSCKVCHNLSDE 65 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 E+C IC + R + ICVV + + ++IE+ ++ G Y VL G +S GI P+++ + Sbjct: 66 EICQICKDNTR-DRSIICVVATAKEAFSIEKMNEYHGVYHVLGGLISTQKGILPENLNIL 124 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIA-ELCAQYDVEASRIAHGVPVGGELEMVD 185 L R+ +E +TEVILA N TVEGE T+ Y+A +L + DV SR+A G+P+GG L+ D Sbjct: 125 SLINRV-DENVTEVILALNATVEGEMTSLYLAKKLEDKTDV--SRLAFGLPIGGHLDYAD 181 Query: 186 GTTLSHSLAGRHKIR 200 TL + GR K++ Sbjct: 182 DMTLMKAFEGRSKVK 196 >UniRef50_C9RQ73 Recombination protein RecR n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQ73_FIBSS Length = 198 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 112/190 (58%), Gaps = 2/190 (1%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L L+ LPG+G K+A+R+A+ +L R + R A +L +A ++ C C FT++ Sbjct: 8 LENLISEFASLPGIGLKTARRLAYHMLSRKKGDVERFADSLMQAAEKVHPCPRCHAFTDE 67 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 ++C C R+ ICVVE +DI E++ G YFVL G +SPLDGIGP+ + L Sbjct: 68 DICPTCRA--REGAKSICVVEKNSDILPFERSSVHKGLYFVLGGVISPLDGIGPEALHLP 125 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 +L +R+ E I E++LA + E ++TA I + A +V+ +R+A G+P+G +LE +D Sbjct: 126 QLVERIKAENIEELVLALGSSPEADSTALMIDRMLAGVNVKRTRLARGIPMGSDLEFIDE 185 Query: 187 TTLSHSLAGR 196 T+ + GR Sbjct: 186 VTMLRAFEGR 195 >UniRef50_C1TMJ9 Recombination protein RecR n=3 Tax=Synergistaceae RepID=C1TMJ9_9BACT Length = 203 Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 75/189 (39%), Positives = 112/189 (59%), Gaps = 2/189 (1%) Query: 9 QLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEV 68 +L+ L+ LPGVG KSA+RMAF + Q + LA A + C C T+++ Sbjct: 9 RLIGLLKRLPGVGEKSARRMAFFVFQAPEGYSIELADAFLSLKKNLSVCEICGNLTDRQP 68 Query: 69 CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRL 128 CNICS+P R + +CVVE D+ +IEQ G + G Y+VL G +SPLDG + LD L Sbjct: 69 CNICSDPLRDRS-TLCVVEGIEDLLSIEQAGVYDGLYYVLGGTVSPLDGEDLPEGSLDGL 127 Query: 129 EQRLAEEKITEVILATNPTVEGEATANYI-AELCAQYDVEASRIAHGVPVGGELEMVDGT 187 + +++EVI+ATNP VEG+ T + + + L D++ SR+++G+PVGG +E D Sbjct: 128 INMIERGRVSEVIVATNPRVEGDMTYHAVLSALKGMSDLKKSRLSYGLPVGGSIEFADRV 187 Query: 188 TLSHSLAGR 196 TL ++ R Sbjct: 188 TLHAAMETR 196 >UniRef50_Q03ZG8 Recombination protein recR n=31 Tax=Firmicutes RepID=RECR_LEUMM Length = 201 Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 119/202 (58%), Gaps = 4/202 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ + +L+++ LPG+GPK+A R+AF L + ++AL A +++ C+ C Sbjct: 1 MQYPEPIAKLIDSYTKLPGIGPKTATRLAFYTLGMNEEDVQDFSKALISAKTDLTFCSIC 60 Query: 61 R--TFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGI 118 T T+ + C IC + R ++ + VVE+ D+ A+E T + G Y VL G +SP G Sbjct: 61 GNITATDTDPCVICRDQSRDQS-TVFVVENSRDVMAMENTRDYHGLYHVLNGVISPSAGT 119 Query: 119 GPDDIGLDRLEQRLAE-EKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPV 177 GP+DI L L +RL+E E+I EVI+ TN EGEATA Y+A L + +R+AHG+ V Sbjct: 120 GPEDINLPSLIRRLSEHEEIKEVIVGTNANAEGEATAMYLARLLKPAGIAVTRLAHGLAV 179 Query: 178 GGELEMVDGTTLSHSLAGRHKI 199 G +++ D TL ++ GR K+ Sbjct: 180 GSDIDYADELTLIKAVQGRTKL 201 >UniRef50_Q045U7 Recombination protein recR n=130 Tax=Firmicutes RepID=RECR_LACGA Length = 199 Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 71/197 (36%), Positives = 115/197 (58%), Gaps = 2/197 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ + +L++ LPG+G K+A R+AF + +++L + + C+ C Sbjct: 1 MQYPLPIARLIDNYMKLPGIGEKTATRLAFYTMDMPEDDVEDFSKSLIQVKENLHSCSIC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 TE + C IC + R + I VVE P D+ A E+ G+++G Y VL G LSP+DG+GP Sbjct: 61 GNITESDPCEICRDANR-DRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGP 119 Query: 121 DDIGLDRLEQRL-AEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 ++I + L RL ++++ EVILA N + EGEATA Y+A+L ++ +R+A G+ VG Sbjct: 120 EEINIKSLITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGS 179 Query: 180 ELEMVDGTTLSHSLAGR 196 ++E + TL ++ GR Sbjct: 180 DIEYANSITLKRAVQGR 196 >UniRef50_B4U725 Recombination protein RecR n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U725_HYDS0 Length = 223 Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 114/215 (53%), Gaps = 26/215 (12%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L + +E ++ +PG G K+A R + L+ D+ + ++L S I C +C T+Q Sbjct: 11 LLKALENIKHIPGYGEKNASRFVYGFLKLDKIKKEDIVKSLENLFS-ITTCKECNILTDQ 69 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 EVC ICSNP+R + I VVE D Y IE+ +F G Y +L G +SPL+GI P+D+ ++ Sbjct: 70 EVCAICSNPKRSKK-YIAVVEESQDAYKIEKLERFKGVYHILGGRISPLEGIAPEDLSIE 128 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEA------------------ 168 L++R+ + E+I+ATNP EGEATANY+ ++ + ++ Sbjct: 129 LLKERIRKYNPKEIIIATNPNPEGEATANYLIKIIKSLNNKSATSMPRTTSMPRTTSLPR 188 Query: 169 ------SRIAHGVPVGGELEMVDGTTLSHSLAGRH 197 +RIA + G +E VD +L S+ R Sbjct: 189 STTPKITRIATAIQFGTLIEYVDDLSLEESIEKRE 223 >UniRef50_B3R068 Recombination protein recR n=1 Tax=Candidatus Phytoplasma mali AT RepID=RECR_PHYMT Length = 206 Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 64/205 (31%), Positives = 119/205 (58%), Gaps = 8/205 (3%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLL-QRDRSGGMRLAQALTRAMSEIGHCAD 59 M+ SP + +L+E+ LPGVG K+A+R F L+ Q++++ + L++ L ++ I C Sbjct: 1 MKNSPTVEKLIESFTLLPGVGKKTAERYTFFLINQKNKNKILYLSKHLKELVNNIKSCNI 60 Query: 60 CRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 C TE+ +CN CS+ +R ++ I +V D+Y E+ + G Y +L G + I Sbjct: 61 CGYITEKNICNFCSDSQR-DHSTIMIVADNRDVYCFEKINHYHGLYHILGGLIDFSRCIK 119 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQY----DVEASRIAHGV 175 P+++ + L+ RL + I E+I+ATN T+EGE TA Y + +Y ++ +++A+G+ Sbjct: 120 PENLNFNSLKDRL--KTIKEIIIATNSTLEGEITATYSKKFLKKYLKDEKIKITKLAYGI 177 Query: 176 PVGGELEMVDGTTLSHSLAGRHKIR 200 P+G + +D TL +++ R+ + Sbjct: 178 PIGLDFNYLDEKTLCNAINNRNNFK 202 >UniRef50_Q0BVJ5 Recombination protein recR n=184 Tax=Bacteria RepID=RECR_GRABC Length = 202 Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 77/190 (40%), Positives = 113/190 (59%), Gaps = 6/190 (3%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 P L QL+ L LPG+GP+SA+R A LLQ+ + + LA A+ A + C C Sbjct: 4 PELEQLIALLARLPGLGPRSARRAALRLLQQPETRLLPLAAAMQNAARAVKTCRVCGNLD 63 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 + C++C++P R ENG ICVVES D++A+++ G + G Y VL G LS L G GPD + Sbjct: 64 SADPCSVCTDPSR-ENGLICVVESVGDLWAMDRAGIYRGLYHVLGGVLSALAGTGPDALN 122 Query: 125 LDRLEQRLAEEK-----ITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 L +R+ + +TEVILA TV+G TA+++AE V +R+A G+P+GG Sbjct: 123 WPALMRRIESSRPSATPVTEVILALGATVDGATTAHWLAEQLRPMGVSVTRLAQGIPIGG 182 Query: 180 ELEMVDGTTL 189 L+++D TL Sbjct: 183 ALDVLDDGTL 192 >UniRef50_B8DQU5 Recombination protein recR n=13 Tax=Desulfovibrionales RepID=RECR_DESVM Length = 201 Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 74/195 (37%), Positives = 111/195 (56%), Gaps = 3/195 (1%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L L+E L LPG+GPKSA R+A TLL+ S RL +A+ + C C T+ Sbjct: 8 LKALVEQLSRLPGLGPKSALRLAMTLLKWPASETRRLGRAVHDLRDNLHLCGRCGALTDV 67 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 + C IC++P R +C+V + +E+ G + G+Y +L G L+PLD + D + LD Sbjct: 68 DPCGICTDPARS-GETLCLVSEWDSLLTLEEGGFYKGQYLILGGLLAPLDNLHADSLELD 126 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCA-QY-DVEASRIAHGVPVGGELEMV 184 RL +R+AE + EV++A TVE E TA YI + QY V +R+A G+P+G E++ + Sbjct: 127 RLTKRMAEGTVREVVMALGTTVEAENTATYIRNMIVRQYPQVRVTRLAQGIPLGSEVKFM 186 Query: 185 DGTTLSHSLAGRHKI 199 D TL S+ R + Sbjct: 187 DRETLRQSMQYRQDL 201 >UniRef50_Q1MPV5 Recombinational DNA repair protein (RecF pathway) ref|ZP_00131299.1| 353: Recombinational DNA repair protein (RecF pathway) n=2 Tax=Desulfovibrionaceae RepID=Q1MPV5_LAWIP Length = 203 Score = 132 bits (331), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 68/196 (34%), Positives = 113/196 (57%), Gaps = 3/196 (1%) Query: 6 LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTE 65 +L ++ L LPG+GPKSA R+A T L+ S L +++ ++G C+ C ++ Sbjct: 8 ILRTVIGQLTKLPGLGPKSAMRIAMTFLKWPESETRSLGKSIYELRDKLGLCSSCGALSD 67 Query: 66 QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGL 125 +C +C++ R +N +C+V + +E+ G F GRY +L G L+PLD +G D + + Sbjct: 68 SNLCFVCADSERLDN-LLCIVSEWDSMVTLEEVGFFQGRYMILGGLLAPLDNMGLDKLEI 126 Query: 126 DRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQY--DVEASRIAHGVPVGGELEM 183 DRL RL + ++ EVILA T+E E TA I L ++ + +R+A G+P+G E++ Sbjct: 127 DRLIDRLNKGEVKEVILALGSTIEAETTATMIYSLISKRFPYIRVTRLAQGIPLGAEVKF 186 Query: 184 VDGTTLSHSLAGRHKI 199 +D TL SL R ++ Sbjct: 187 MDRETLRQSLQYRQEL 202 >UniRef50_B5Y7S4 Recombination protein RecR n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7S4_COPPD Length = 201 Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 72/196 (36%), Positives = 111/196 (56%), Gaps = 5/196 (2%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF-TE 65 L +L + R LPGVGP++A++MA+ L + R + L +I C C Sbjct: 3 LEELSKQFRRLPGVGPRTAEKMAYYWLTLEDDEAERFLRTLENFRRQITLCKRCHNLAVG 62 Query: 66 QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGL 125 ++CNIC + RR + I VVE+P D+ IEQ G + G Y VL G +SP G+ P+ + + Sbjct: 63 SDLCNICQDNRRDK--AIVVVETPQDVENIEQAGIYHGYYHVLHGLISPRKGVTPEQLFI 120 Query: 126 DRLEQRLAEEKITEVILATNPTVEGEATANYIAELCA--QYDVEASRIAHGVPVGGELEM 183 L R+ +E IT+VI+AT+ T+EG+ TA+Y+A+ Q ++ R+ G+PVGGEL Sbjct: 121 SDLFDRIVDEGITQVIIATSFTMEGDITADYLAKQLKTLQPNIPIYRLGTGLPVGGELNY 180 Query: 184 VDGTTLSHSLAGRHKI 199 D TL + + K+ Sbjct: 181 ADKATLRAAFITKQKV 196 >UniRef50_D1B5E4 Recombination protein RecR n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5E4_THEAS Length = 200 Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 78/193 (40%), Positives = 106/193 (54%), Gaps = 1/193 (0%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 P + L+E L+ LPGVG K A+R AF +L + + L++A+ A + C+ C Sbjct: 7 PSVDGLIEKLKRLPGVGEKGARRFAFFILGQPKDWVEDLSRAIREARWSVRPCSVCGGLA 66 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 E ++C ICS+P R ICVVES D A+E+ F+GRY VL G SPLDG Sbjct: 67 EGDLCPICSDPARDRE-VICVVESQEDCVAMERHRIFNGRYHVLGGRYSPLDGEDIPSEA 125 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 L L R+ + EVILA P+VEGE TA + E V+ SR++ G+PVGG + Sbjct: 126 LASLRDRVERGGVQEVILALAPSVEGELTALAVKEALDDLPVKVSRLSSGLPVGGSIGFA 185 Query: 185 DGTTLSHSLAGRH 197 D TL +L GR Sbjct: 186 DSATLKLALEGRR 198 >UniRef50_B7CCG8 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG8_9FIRM Length = 195 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 75/187 (40%), Positives = 108/187 (57%), Gaps = 3/187 (1%) Query: 10 LMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEVC 69 L+ + LPGVG K+A+R AFT+L + +A+ L ++ C C TE E+C Sbjct: 9 LIYEFQKLPGVGAKTAERYAFTVLSWNEDEISEMAETLINLKKKVKKCTCCGNLTEDELC 68 Query: 70 NICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLE 129 C + +R +N ICVV++P DI IE +F+G Y VL G ++ G+ PD + + L Sbjct: 69 EFCKSSKRNQN-IICVVQNPKDISVIESMQEFNGVYHVLDGLINTQKGVLPDQLNIMSLL 127 Query: 130 QRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDGTTL 189 +R+ E EVILA +PTVEGE TA YI++L + SR+AHG+PVG L+ D TL Sbjct: 128 KRI-NENTEEVILALDPTVEGETTALYISKLL-EGKCRVSRLAHGIPVGSHLDYTDAMTL 185 Query: 190 SHSLAGR 196 + GR Sbjct: 186 LKAFEGR 192 >UniRef50_D0RR34 Recombination protein RecR n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RR34_9RICK Length = 205 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 112/199 (56%), Gaps = 2/199 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 T P+L L+ + LPG+GPKSA+R+A L + + LA L A +I C C Sbjct: 4 TEPVLDNLISLISRLPGLGPKSARRIALHLFKNKENLMKPLADTLGIAHEKILRCKICGA 63 Query: 63 FTEQEVCNICSNPRRQENG--QICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 + S +N Q+C+VE+ AD++A+E T + G Y +L G LS L+G P Sbjct: 64 IKSVDANCTISKCEYIDNSYDQLCIVENIADMWAMEATNIYKGHYHILGGTLSALNGSDP 123 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + + + L R+ + + EVI+AT+ T+EG+ TA+YI + +++ +++AHG+PVG E Sbjct: 124 ESLLIGSLIDRVKKNNVKEVIIATSATIEGQTTAHYINDSLKNLNIKITKLAHGLPVGSE 183 Query: 181 LEMVDGTTLSHSLAGRHKI 199 +E +D TL + R+ I Sbjct: 184 IEYLDDGTLFSAFKYRNSI 202 >UniRef50_C1QBW2 Recombination protein RecR n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QBW2_9SPIR Length = 203 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/192 (34%), Positives = 110/192 (57%), Gaps = 3/192 (1%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L +L + + LPG+G ++A R+A L D A L I C+ C + ++ Sbjct: 9 LDKLTQIISRLPGIGGRTAMRLALYLFDCDEEYLKEFADTLYTLHDNIKLCSKCYSLSDN 68 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 ++C ICSN +R+ N +ICVVE+ D+ AIE+T +++G Y VL G ++PL GIG DI + Sbjct: 69 DICYICSNDKREHN-KICVVETYPDMLAIEKTEEYNGVYHVLGGLIAPLKGIGISDIRIK 127 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCA--QYDVEASRIAHGVPVGGELEMV 184 L +R+ E I E+++A + ++E + TA YI +L Y +RI +G+ + ++E Sbjct: 128 ELIERVNTENIDEIMIAFSASLEADTTAGYIFKLLKDNNYTGRVTRITYGISLSSDIENA 187 Query: 185 DGTTLSHSLAGR 196 D +L+ S+ R Sbjct: 188 DSRSLARSILDR 199 >UniRef50_Q3KMC2 Recombination protein recR n=12 Tax=Chlamydiaceae RepID=RECR_CHLTA Length = 200 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 115/193 (59%), Gaps = 4/193 (2%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF--T 64 +++L+ L+ LPG+G KSA+++AF LL+ D S +AQAL + C++C + Sbjct: 8 ISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQIEAMAQALQEFSTSHATCSNCFCLKIS 67 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 + CN CS R ++ +C+V +P D++A+E++ F G YFVL LSP+ G Sbjct: 68 QTSPCNFCSESR--DSSSLCIVATPKDVFALEKSKIFKGHYFVLGNLLSPITGKHLSLEK 125 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 L L+QR+ E+I+A + T+EG+ATA ++ + + ++ SR+A G+PVG + V Sbjct: 126 LAILKQRIEACSPKEMIIALDATLEGDATALFLKQEFSYLPIKISRLALGMPVGLSFDFV 185 Query: 185 DGTTLSHSLAGRH 197 D TL+ + +GR+ Sbjct: 186 DANTLARAFSGRN 198 >UniRef50_B2UKM6 Recombination protein RecR n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKM6_AKKM8 Length = 202 Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 76/196 (38%), Positives = 110/196 (56%), Gaps = 3/196 (1%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF- 63 P+L +L+ AL+ LPG+G + A+RMA +LQ +A+ + +A + C C F Sbjct: 9 PVL-ELVTALKQLPGIGTRGAERMALWMLQGHMGEAEAIARTIGQAAEHVTPCPVCGFFS 67 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 TE E C C + R ++ ICVVE D+ IE++ + G Y L G LSPLD + P+D+ Sbjct: 68 TEGEPCAACRDEER-DSRLICVVEQATDVIPIERSSAYRGLYHCLGGKLSPLDDVEPEDL 126 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 + L +R++ + EVILAT VEGEATA Y+ L + D SR A G+P G L Sbjct: 127 NIQSLVERVSRQPDCEVILATGSDVEGEATATYLHHLLKEMDCRISRPAQGLPAGSGLSH 186 Query: 184 VDGTTLSHSLAGRHKI 199 D TL +L GR ++ Sbjct: 187 ADTLTLMKALEGRTRL 202 >UniRef50_A8EUC6 Recombination protein RecR n=6 Tax=Campylobacteraceae RepID=A8EUC6_ARCB4 Length = 190 Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 10/193 (5%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 +L+EA LP +G KSA R+A+ ++ D G+++A ++ A+ I C+ C + +E Sbjct: 8 FYELVEAFESLPTIGKKSALRLAYHIVMNDNYCGIKIAHSIENALKNITKCSRCGSMSEH 67 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 E+C C + R +N ++C+V+S DI+ IE + QF GRYFV + LD D+ LD Sbjct: 68 EICEFCLDENR-DNEKLCIVQSAKDIFVIEDSNQFDGRYFV----IEELD----QDV-LD 117 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 L++ + + ++ A P++ +A +I + +D++ ++IA GVP G LE VD Sbjct: 118 SLQRFILNNGVKTILFAITPSIANDAFILFIEDKLKDFDIKFTKIAQGVPTGVSLENVDI 177 Query: 187 TTLSHSLAGRHKI 199 +LS ++ + +I Sbjct: 178 LSLSKAIQSKVEI 190 >UniRef50_Q4FNA8 Recombination protein recR n=5 Tax=root RepID=RECR_PELUB Length = 203 Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 112/201 (55%), Gaps = 3/201 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ + +L++ + LPG+GPKSA+R+ L+ +A L + + C C Sbjct: 1 MQNINEIEELIKLISKLPGLGPKSAKRIVLKLINNRDELVKPMANTLAQVYKNVIRCQSC 60 Query: 61 RTFTEQEV-CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 T + CN C N + + N +ICVVE AD ++IE + + G + +L G +S G Sbjct: 61 GTLKSNSLGCNNCENSKEKYN-KICVVEDIADQWSIENSNIYKGYFHILGGTISSA-GQR 118 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 +D+ ++ L +R++ E I EVILAT+ TVEG+ TA YI + + + +++A G+PVGG Sbjct: 119 KEDLLINSLVERVSRENIEEVILATSATVEGQTTAYYIEDSLKKTSTKVTKLAQGLPVGG 178 Query: 180 ELEMVDGTTLSHSLAGRHKIR 200 E+E +D TL + R I+ Sbjct: 179 EIESLDDGTLYSAFKNRTGIK 199 >UniRef50_C0QZV8 Recombination protein recR n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=RECR_BRAHW Length = 201 Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 112/198 (56%), Gaps = 3/198 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M L +L + + LPG+G ++A R+A L D + L+ I C C Sbjct: 1 MNNIQSLDKLTQIISRLPGIGTRTAMRLALYLFDCDDEYLKEFSDVLSSLHENIKLCQVC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 + ++ ++C+ICSN +R+ N +IC+VES D+ AIE+T +++G Y +L G +SPL GIG Sbjct: 61 YSLSDNDICDICSNDKREHN-KICIVESYPDMLAIEKTEEYNGVYHILGGLISPLKGIGI 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCA--QYDVEASRIAHGVPVG 178 DI + L +R+ I E+++A + ++E + TA+YI + ++ +RI +G+ + Sbjct: 120 SDIRIKELIERVNNNSIEEIMIAFSASLEADTTASYIYKTLKDNNFNGRITRITYGISLA 179 Query: 179 GELEMVDGTTLSHSLAGR 196 ++E D +L+ S+ R Sbjct: 180 SDIENADSRSLARSILDR 197 >UniRef50_D1NBH0 Recombination protein RecR n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NBH0_9BACT Length = 210 Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 70/189 (37%), Positives = 108/189 (57%), Gaps = 2/189 (1%) Query: 9 QLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ-E 67 +L+ AL+ LPG+G + A+R+A ++L + L + + + +G C +C + E Sbjct: 13 ELIGALKQLPGIGRRGAERLALSMLGWEPEKLQYLGKLVETLPATVGSCPECGALSNAGE 72 Query: 68 VCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDR 127 +C +C P R +CVVE+ A ++AIE +G F GRY VL G LSPLD + L++ Sbjct: 73 LCAVCRLPDRDRQ-LVCVVETMAQVFAIEASGNFRGRYHVLGGRLSPLDAENGAGLNLEK 131 Query: 128 LEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDGT 187 L ++ E+ILA +P VEG ATA Y+AEL V ++ A G+P G L DG Sbjct: 132 LIGLARSGQVREIILALSPDVEGRATAIYLAELLRDAPVRVTQPALGLPAGANLSYADGA 191 Query: 188 TLSHSLAGR 196 T++ +L+GR Sbjct: 192 TIAAALSGR 200 >UniRef50_B9L9M2 Recombination protein RecR n=1 Tax=Nautilia profundicola AmH RepID=B9L9M2_NAUPA Length = 187 Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/193 (33%), Positives = 112/193 (58%), Gaps = 12/193 (6%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 + +L+EA LP +G KSA R+A ++ +D+ ++L A+ ++ I C C F+E Sbjct: 7 INRLIEAFEELPSIGKKSATRLALSI-AKDKFKALKLINAIEDVVANIKECEICGNFSEH 65 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 E+C+IC++ R + + +VE+ DI IE++G ++G YFVL H+ DD + Sbjct: 66 EICDICASENR--DKTLAIVENSKDIMIIEESGSYNGYYFVL-THI--------DDEVIQ 114 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 +L + + +++I EVI A P+VE EA + YI + ++E ++IA GVP G E VD Sbjct: 115 KLREIIKDKEIKEVIFAFPPSVESEARSLYIEDKLKDLNIEFTQIAQGVPTGVHFENVDV 174 Query: 187 TTLSHSLAGRHKI 199 +L+ ++ R K+ Sbjct: 175 NSLAKAIKLRFKL 187 >UniRef50_Q5PB75 Recombination protein recR n=5 Tax=Anaplasma RepID=RECR_ANAMM Length = 195 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 110/193 (56%), Gaps = 1/193 (0%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 +T+L+ LP +GP S++R+ LL+ + + LA + C C Sbjct: 3 ITKLINLFAKLPSLGPASSRRIVLHLLRHRQDVMVPLAAGIRELEMHTKECTICHNLDTI 62 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 C+ICS+ R ++ ICVVE D++A E+ +SG Y VL G LS L GIGP+D+ L Sbjct: 63 SPCSICSDKGRDQS-IICVVEELGDLWAFERGRIYSGVYHVLGGALSALSGIGPEDLNLG 121 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 + R+ + EVI+AT+ ++G+ T +YIA++ D + +R+A G+P+GGE++ +D Sbjct: 122 GIVDRIRTHGVKEVIVATSNDMDGQVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDE 181 Query: 187 TTLSHSLAGRHKI 199 TL +L+ R+ I Sbjct: 182 GTLRAALSSRYVI 194 >UniRef50_Q8EUW2 Recombinational DNA repair protein RecR n=1 Tax=Mycoplasma penetrans RepID=Q8EUW2_MYCPE Length = 201 Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 59/193 (30%), Positives = 104/193 (53%), Gaps = 4/193 (2%) Query: 10 LMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEV- 68 +EAL+ LP + K+A ++A+ L+ D + LT S I C +C T + Sbjct: 9 FVEALKSLPTISNKNASKIAYFFLEADEVFYSQFLDRLTSLKSNIKFCLNCNNLTSDSLY 68 Query: 69 CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRL 128 C+IC+ R +N ++C+V D+ IE + FSG YFVL + D I L++L Sbjct: 69 CDICNTDSRDKN-KLCIVSYLEDLEKIEASNSFSGLYFVLNTEIKHKDLKTAKKINLEKL 127 Query: 129 EQRLAEEKITEVILATNPTVEGEATANYIAELCAQ--YDVEASRIAHGVPVGGELEMVDG 186 E + + + E+++ TN T++GE T++YI + Y+++ R+A G+P+ +E +D Sbjct: 128 ENMINKFHVREILICTNMTIDGELTSSYIKNFIKEKNYNIDLYRLALGIPMNASIEYIDW 187 Query: 187 TTLSHSLAGRHKI 199 +L +S+ + KI Sbjct: 188 ESLKYSIENKRKI 200 >UniRef50_A5CCA2 Recombination protein recR n=17 Tax=Rickettsieae RepID=RECR_ORITB Length = 203 Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 111/197 (56%), Gaps = 2/197 (1%) Query: 2 QTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCR 61 + S ++ +L+ + LPG+G +SA+R+ L+Q L LT ++ I C C Sbjct: 3 KDSNIIEELIFSFAQLPGLGNRSARRIVLYLMQDKEVRIKNLNNQLTSVLNNIMECDYCG 62 Query: 62 TFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP- 120 +CNIC + R ++ I +VES AD++A+E++ F G Y VL LS + G Sbjct: 63 NLDVVSICNICRHSER-DSSIIAIVESVADLWALERSKVFKGWYHVLGKTLSAVSGNDAI 121 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + + L +L R+ E K+ E+ILATN T++G+ TA ++ + +++ S++A G+P+GGE Sbjct: 122 NSLKLPKLLNRIREYKVQEIILATNSTIDGQMTAFFVIDYLKDENLKISKLASGIPLGGE 181 Query: 181 LEMVDGTTLSHSLAGRH 197 L+ +D TL + R Sbjct: 182 LDYLDEGTLLAAFKARQ 198 >UniRef50_Q17WX2 Recombination protein recR n=17 Tax=Helicobacter RepID=RECR_HELAH Length = 193 Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 10/190 (5%) Query: 9 QLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEV 68 L++ L +P VG KSA +MA+ L + ++L AL A+ + C C +E E+ Sbjct: 13 NLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKLTHALENALENLKTCTSCNALSESEI 72 Query: 69 CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRL 128 C ICS+ RQ N Q+C+V P D++ +E F GRY VL +++ + L Sbjct: 73 CEICSDESRQ-NSQLCMVLHPRDVFILEDLKDFLGRYHVLN---------SIENVDFNAL 122 Query: 129 EQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDGTT 188 E+RL +EKI E+I A PT+ ++ YI + + ++IA GVP G E +D + Sbjct: 123 EKRLIKEKIKEIIFAFPPTLANDSLMLYIEDKLQHCHLTFTKIAQGVPAGVNFENIDSVS 182 Query: 189 LSHSLAGRHK 198 LS + R K Sbjct: 183 LSRAFNSRIK 192 >UniRef50_A9GQA8 DNA repair and genetic recombination protein n=2 Tax=Bacteria RepID=A9GQA8_SORC5 Length = 238 Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 109/200 (54%), Gaps = 8/200 (4%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTE- 65 L+++ + L LPGVG K+AQR A L+ L L I C C E Sbjct: 39 LSRVAQLLARLPGVGEKTAQRFALFLVTAGEDTARDLGGELVELCDHIRPCIRCGHIAEL 98 Query: 66 ----QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 + +C IC + RR + +CVV D+ AIE++G GRYFVL LSPL+G+G + Sbjct: 99 DDGGRALCAICLDTRR-DGALLCVVARVQDLLAIERSGAMRGRYFVLGRLLSPLEGVGAE 157 Query: 122 DIGLDRLEQRL--AEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 ++ L+ L R+ E+ + EV++AT P+V+GEATA +A ++ +RIA GVP GG Sbjct: 158 ELPLEALRARVRDPEQPVREVLVATPPSVDGEATALLLARELGAMGIQVTRIASGVPHGG 217 Query: 180 ELEMVDGTTLSHSLAGRHKI 199 +LE D TL ++ GR Sbjct: 218 DLEFADQVTLGRAIEGRKSF 237 >UniRef50_C3XMA4 Recombination protein RecR n=3 Tax=Helicobacter RepID=C3XMA4_9HELI Length = 190 Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 116/200 (58%), Gaps = 11/200 (5%) Query: 1 MQTSP-LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCAD 59 M++ P +L+E+L +P VG KSA R+A+ L D+ +++A + + E+ C + Sbjct: 1 MKSYPESFAKLVESLERIPSVGRKSAMRLAYFLAFEDKFSALQVAHNIECCVQELRTCEE 60 Query: 60 CRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 C T Q VC IC + R NG++C+V +P +I+ +E++G+F G+YFV LD + Sbjct: 61 CGGITNQAVCEICLDATRN-NGELCIVANPREIFLLEESGEFFGKYFV-------LDSL- 111 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 D + L++LE+ + + ITE+I A +P++ ++ Y+ + + + ++IA G+P G Sbjct: 112 -DKLNLEQLERSVTKFGITEIIFAFSPSLGSDSIMLYLEDKLENFGLRFTKIAQGIPTGV 170 Query: 180 ELEMVDGTTLSHSLAGRHKI 199 LE VD ++ +L R KI Sbjct: 171 SLENVDQLSIIRALQSRVKI 190 >UniRef50_Q30R19 DNA replication and repair protein RecR n=4 Tax=Epsilonproteobacteria RepID=Q30R19_SULDN Length = 189 Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 65/193 (33%), Positives = 107/193 (55%), Gaps = 11/193 (5%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 +L+EA + LP +G KSA R+A+ ++ ++ G+++A A+ A+ I CA C +E Sbjct: 8 FNKLVEAFQELPTIGKKSAIRLAYHIVMKNSFVGIKIAHAIEEALGSIKQCAACGGMSED 67 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 E+C IC + R E +C+VE+ DI +E+ F GRYFV LD + ++ L Sbjct: 68 ELCFICCDESRDET-LLCIVENAKDILLLEENRLFDGRYFV-------LDSL--ENFNLS 117 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 LE L + + E++ A P++ +A YI + + + + S+IA GVP G LE +D Sbjct: 118 GLES-LVKNGVEEIVFALTPSIANDAVILYIEDKLSDFTINFSKIAQGVPTGVSLENIDL 176 Query: 187 TTLSHSLAGRHKI 199 +LS +L R K+ Sbjct: 177 LSLSRALIDRVKV 189 >UniRef50_A1W0P8 Recombination protein recR n=21 Tax=Epsilonproteobacteria RepID=RECR_CAMJJ Length = 190 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/193 (33%), Positives = 109/193 (56%), Gaps = 10/193 (5%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 +L+E+ LP +G K+A R+A+ L ++ GM+LA + A+ I C C +E Sbjct: 8 FNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPCEQCGALSEN 67 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 E+C ICS+ R +N +C+VESP DI +E++ ++G YFV LD + + L+ Sbjct: 68 ELCEICSDEERNKN-ILCIVESPKDILTLEESQSYNGLYFV-------LDELNEE--KLE 117 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 +L+Q + + I+E+I A ++ +AT +I + ++ S+IA G+P G LE VD Sbjct: 118 KLKQIILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFSKIAQGIPSGVNLENVDL 177 Query: 187 TTLSHSLAGRHKI 199 +L+ ++ R KI Sbjct: 178 ISLNKAMNFRTKI 190 >UniRef50_B1AI75 Recombination protein recR n=15 Tax=Ureaplasma RepID=RECR_UREP2 Length = 201 Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 104/192 (54%), Gaps = 2/192 (1%) Query: 10 LMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEVC 69 L++AL+ LPGVG K+A + AF LLQ+D+ L + + A + I C C FT ++ C Sbjct: 10 LVDALKSLPGVGTKNANKWAFFLLQQDQKYIDDLIKRIKEAKTNILKCKYCANFTNKDEC 69 Query: 70 NICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLE 129 +IC N R + ++ +V + D+ IE ++G Y + G +S + + + ++ Sbjct: 70 DICLNEYR-DFTKLMIVTTNEDLERIESANIYNGLYHITNGEISLRKNVVIEHTNIKTIK 128 Query: 130 QRLAEEKITEVILATNPTVEGEATANYIAELCAQY-DVEASRIAHGVPVGGELEMVDGTT 188 +R+ E+I+AT+ T +GE TA+YI + D++ RI G+P+ ++ D T Sbjct: 129 ERVLNGSFKEIIIATSYTHDGEVTADYIIRMLEDIKDLQIYRIGFGIPLNSSIDYADDET 188 Query: 189 LSHSLAGRHKIR 200 L SL + KIR Sbjct: 189 LKQSLINKRKIR 200 >UniRef50_B1ZW44 Recombination protein RecR n=3 Tax=Verrucomicrobia RepID=B1ZW44_OPITP Length = 198 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/189 (37%), Positives = 105/189 (55%), Gaps = 2/189 (1%) Query: 9 QLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEV 68 +L + L+ LPG+G +S++R+A LL L AL A + C C E E+ Sbjct: 7 KLQQQLKQLPGLGYRSSERIALHLLVEKPQRLPALVAALEEAARTVRRCTRCGNLAEAEL 66 Query: 69 CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRL 128 C IC++ RR + +CVVE D+ A+E++G + G Y VL G LSP+ G+GPDD+ + L Sbjct: 67 CPICADERRDPS-LVCVVEEVPDLVALERSGAYRGVYHVLHGKLSPMHGVGPDDLNVASL 125 Query: 129 EQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDV-EASRIAHGVPVGGELEMVDGT 187 R+ + E+ILA + VEGEAT +Y+ E + + +RI G+P GG + D Sbjct: 126 LARVESGAVGELILALSNDVEGEATCHYLTEQLKKGKAPQITRIGFGLPSGGGVLYADSV 185 Query: 188 TLSHSLAGR 196 TL +L R Sbjct: 186 TLKSALDAR 194 >UniRef50_Q7NAN7 RecR n=2 Tax=Mycoplasma gallisepticum RepID=Q7NAN7_MYCGA Length = 213 Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 101/194 (52%), Gaps = 1/194 (0%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L+E + LP V K A+++ L+ + L L RA I C C+ ++ + Sbjct: 17 FNNLVEQISDLPSVSKKQAKKITQYLMTKSDRYVYDLIDVLKRAKLSIKICEMCQGWSNR 76 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 +C+ICS+ R N ++C+V D+ IE++ + G+YF+L +S + ++I D Sbjct: 77 SICSICSDESRN-NNELCIVSFFDDLNVIEESQAYHGKYFILNHEISKKNKRIIEEINFD 135 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 L + ++KI +VI+ATN T +G+ TANY+ L +D++ R+ G+P ++ D Sbjct: 136 LLLDLIKKQKIEKVIIATNFTQDGQTTANYLRFLLDDFDLKIYRLGMGLPYNSSIDYADS 195 Query: 187 TTLSHSLAGRHKIR 200 +L + + I+ Sbjct: 196 FSLKGAFENKQLIK 209 >UniRef50_Q4JSL5 Recombination protein recR n=8 Tax=Corynebacterium RepID=RECR_CORJK Length = 250 Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 76/244 (31%), Positives = 112/244 (45%), Gaps = 56/244 (22%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L +++ LPG+GPKSAQR+A LL + R AL R + C C +++ Sbjct: 6 LQDVIDEFSRLPGIGPKSAQRIALHLLNEEPEDIERFQSALGRLQRGVTFCRICHNISQE 65 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 +VC IC++ R ++ ICVVE DI IE+T ++ GRY VL G L PL+GIGP ++ + Sbjct: 66 DVCRICADSNRDKS-IICVVEESKDIQVIERTAEYRGRYHVLGGALDPLNGIGPKELNVT 124 Query: 127 RLEQRLAEEKITEVILA----------TNPTVEGEATANYIAEL------CAQYDVE--- 167 L QR+ + +V L + +GE++ AE + DVE Sbjct: 125 PLVQRIG-GALPDVALGAKGGGASLGDADTPADGESSGADAAETGNAKTAAVETDVEYDE 183 Query: 168 -----------------------------------ASRIAHGVPVGGELEMVDGTTLSHS 192 +R+A G+P+GG+LE VD TLS + Sbjct: 184 APEITEVIIATDPNTEGEATASYLGRLLRDFPGLTVTRLASGIPMGGDLEFVDELTLSRA 243 Query: 193 LAGR 196 AGR Sbjct: 244 FAGR 247 >UniRef50_Q2STA5 DNA repair protein RecM n=5 Tax=Mollicutes RepID=Q2STA5_MYCCT Length = 196 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/195 (29%), Positives = 102/195 (52%), Gaps = 6/195 (3%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLL-QRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 + +++E++R G+ K+++R+ LL +D+ L + I C C Sbjct: 4 SIFNEIVESIRTNEGLTKKTSERLLVNLLLNKDKLD--EFINQLNKVNQLISTCKICGYL 61 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 +E C +CS R +N IC+V + D IE ++ G Y +L G ++ I D + Sbjct: 62 SENNKCLVCSLDNRNQN-TICIVSTILDAKNIENANKYKGVYHILNGEINLNKNITFDKL 120 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 + + +R+ ++ TE+ILA N T EGE TANY+ +L + +++ +R+A G+P+G L+ Sbjct: 121 NISSIFKRINDD--TEIILALNSTFEGELTANYLYKLLSTKNIKITRLAKGIPMGASLDY 178 Query: 184 VDGTTLSHSLAGRHK 198 +D TL + R K Sbjct: 179 MDEFTLQSAFINRKK 193 >UniRef50_Q6KIL5 Recombination protein n=1 Tax=Mycoplasma mobile RepID=Q6KIL5_MYCMO Length = 196 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 105/191 (54%), Gaps = 6/191 (3%) Query: 9 QLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEV 68 L+ +L+ LPG+ K A++++F ++Q + L A +A S + C +C +E ++ Sbjct: 8 NLVLSLKELPGISKKQAEKISFYIIQSKKDVLNNLIDAFQKAKSNLVKCNNCNLISEHQL 67 Query: 69 CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRL 128 C+IC + R + ++ VVES ++ E +SG+YFV+ + D +++ Sbjct: 68 CSICIDKSR--DNKLMVVESSLEVNKFEDLQIYSGKYFVVDSLIKNFDDKSTYFETYNKI 125 Query: 129 EQRLAEEKITEVILATNPTVEGEATANYIAELCAQY--DVEASRIAHGVPVGGELEMVDG 186 + L EVILA +PT+EGE +A YI L + +++ S++A+G+PVG ++E +D Sbjct: 126 FKILPNA--DEVILALSPTLEGEVSAIYIKNLINEKFPNLKISQLANGLPVGSQVEYIDS 183 Query: 187 TTLSHSLAGRH 197 TL+ + R Sbjct: 184 LTLNFAFKNRK 194 >UniRef50_Q14QH4 Putative recombination protein recr dna repair n=1 Tax=Spiroplasma citri RepID=Q14QH4_SPICI Length = 174 Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/167 (35%), Positives = 89/167 (53%), Gaps = 10/167 (5%) Query: 14 LRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGH----CADCRTFTEQEVC 69 L+ + GVG K+A+R+ L+ + L Q L +EI + C C T + VC Sbjct: 3 LKTILGVGKKTAERIFNKLIIKPS-----LLQTLEHVFNEIKNNYHQCPICSTLMQNNVC 57 Query: 70 NICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLE 129 C N R + ++CVV + DI IE T F+G Y VL G ++ +GI PD + LE Sbjct: 58 LFCHNDLRDQT-KLCVVSNFFDIIKIEATKVFNGVYHVLNGEINVKNGITPDKMTFPVLE 116 Query: 130 QRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVP 176 R+ ++ I EVI+A T EGE TA Y+ +D++ SR+A G+P Sbjct: 117 SRMNDKIIKEVIIAVGATFEGEVTAQYLKTFLQSFDIKISRLAQGIP 163 >UniRef50_Q98RF8 Recombination protein recR n=1 Tax=Mycoplasma pulmonis RepID=RECR_MYCPU Length = 191 Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 100/190 (52%), Gaps = 5/190 (2%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 + L+ L+ LPGVG K A++++F LL+++ + ++ ++ I C +C Sbjct: 6 IDNLILNLKKLPGVGTKQAEKISFFLLKQNENEVEQIINSIVDLKKNIKECQNCNFLQSN 65 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 +C+ C + R N Q+ + E+ +D E+ G + G+YF++ + + D Sbjct: 66 NICHFCMDKSR--NKQLMIFETTSDALKFEKLGIYRGKYFIIKNLIENVKNANEPKWK-D 122 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 +L + E+I+A NPT+EG+ T+NYI + + ++ +++A G+P+ +++ +D Sbjct: 123 KLLHYASN--FEEIIIALNPTIEGQITSNYIKVILEEVALKVTKLAQGLPINSQIDYIDP 180 Query: 187 TTLSHSLAGR 196 TL+ S R Sbjct: 181 ITLNLSFENR 190 >UniRef50_C8PFQ8 Recombination protein RecR n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PFQ8_9PROT Length = 189 Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 100/199 (50%), Gaps = 10/199 (5%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M + +L+ + LPGVG KSA R A+ + ++ G+ LA + A+ + C C Sbjct: 1 MSGTDRFEELVASFEKLPGVGKKSALRFAYYVSVQNSFLGLNLAHNIEEAVRGLHRCRIC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 E E+C C++ R E+ +IC+VE+P DI+ +E ++GRYFV LD Sbjct: 61 GAVCEGEICEYCADDER-ESDKICIVENPKDIFILESNKIYNGRYFV-------LDAADE 112 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 D I L + ++ E+I A P + + Y+ + A ++ +++A GVP G Sbjct: 113 DKIA--ALREMVSRNGARELIFALTPGINSDGIMLYVEDKLADLSLKFTKLAQGVPTGVS 170 Query: 181 LEMVDGTTLSHSLAGRHKI 199 L+ VD +L ++ GR I Sbjct: 171 LDNVDMLSLIKAINGRTDI 189 >UniRef50_B1VIS4 Recombination protein n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VIS4_CORU7 Length = 273 Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 51/128 (39%), Positives = 76/128 (59%), Gaps = 2/128 (1%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQA-LTRAMSEIGHCADCRTFTE 65 L +++ LPG+GPKSAQR+A LL+ + QA L S + C C ++ Sbjct: 6 LQDVIDEFASLPGIGPKSAQRIALHLLENATGEDIERFQATLGNLHSGVAFCRICHNISQ 65 Query: 66 QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGL 125 ++VC IC++ R + +CVVE P DI IE+TG++ GRY VL G L PL+G+GP ++ + Sbjct: 66 EDVCRICADSSRDAS-LVCVVEEPKDIQVIERTGEYRGRYHVLGGALDPLNGVGPGELNV 124 Query: 126 DRLEQRLA 133 L QR+ Sbjct: 125 TALVQRIG 132 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/79 (49%), Positives = 55/79 (69%), Gaps = 2/79 (2%) Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQY-DVEASRIAHGVPVGGELE 182 G D +E R A E ITEVI+AT+P EGEATA+Y+ L ++ + SR+A G+P+GG+LE Sbjct: 196 GADEVEYREAPE-ITEVIIATDPNTEGEATASYLGRLLKEFPGLTVSRLASGIPMGGDLE 254 Query: 183 MVDGTTLSHSLAGRHKIRF 201 VD TLS + AGR +++ Sbjct: 255 FVDELTLSRAFAGRTQLKL 273 >UniRef50_Q4A6Z7 Putative recombination protein n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A6Z7_MYCS5 Length = 194 Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 4/198 (2%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M L+ + + +R +PG+ K A+++ +L L+ + I C+ C Sbjct: 1 MFNLSLIEEFITKIRKIPGISRKQAEKIVAWILYSKDDEIYELSNYFKKLKDNISFCSFC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 E C IC++ R+ ++ VVE+P I +E+ F G+YFV + + Sbjct: 61 NIPQENNNCYICNDTSRE--NKLLVVENPLIIEKLEKLSLFKGKYFVFKNLVKNEKSLDK 118 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + L +L + + EVI +PT+EGE T N I + ++ + +S++A G+P+G Sbjct: 119 FYLDLSKLLKYC--KNFEEVIFGISPTLEGEVTTNLIRKEFEKFQINSSQLAIGIPIGAS 176 Query: 181 LEMVDGTTLSHSLAGRHK 198 ++ +D TL S+ R K Sbjct: 177 IDYMDEITLKFSIKNRQK 194 >UniRef50_A5IZC7 Recombination protein RecR n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IZC7_MYCAP Length = 195 Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 2/192 (1%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 + +L + L +P + K A+++A +L+ + + + + +IG C C E Sbjct: 6 IDELTKKLLSIPTITKKQAEKLADYILKSPKDEIKQTLEYILETKDKIGFCEKCNFIVEN 65 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 C C R + VVES A + I T ++G +FVL LS D + Sbjct: 66 GKCANCD--RFNLWNTLIVVESVASVKKIFDTDFYNGYFFVLPYLLSMSPKNAKVDFNYE 123 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 L + +KITEVI+ +PT+EG+ T + ++C + DV+ +R A G+P+ +E +D Sbjct: 124 HLVNFIKTKKITEVIIVLSPTIEGQMTTAQLMQICREIDVKVTRAAVGLPLNANIEYIDE 183 Query: 187 TTLSHSLAGRHK 198 T+ ++ R K Sbjct: 184 FTIKQAIENRTK 195 >UniRef50_C4XFW1 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XFW1_MYCFE Length = 196 Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 49/193 (25%), Positives = 98/193 (50%), Gaps = 3/193 (1%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 + +L + L +PG+ K A +M+ L++D+ L +++ + I +C+ C E Sbjct: 6 IEKLNQVLTTIPGISKKQADKMSNFFLKQDQEYIDNLVKSINDLKTNISYCSICNFLKEG 65 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 C +C + R + +VE+ A + I+ ++G Y+VL + + + Sbjct: 66 GKCLVCDDKSRY--NFLMIVENAATLRKIDDMNFYNGYYYVLPYLFNLKNNKEIKNYDYK 123 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELC-AQYDVEASRIAHGVPVGGELEMVD 185 L + +K EVI+ +P++EGE T ++ +L +Q+ ++ +R A G+P+G LE +D Sbjct: 124 ELINYIQHKKFDEVIIVLSPSLEGEMTTGHLLKLINSQFKIKVTRAAIGMPMGSNLEYLD 183 Query: 186 GTTLSHSLAGRHK 198 T+ S+ R+K Sbjct: 184 TFTIKQSIENRNK 196 >UniRef50_D1J7N4 Recombination protein recR n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7N4_MYCHP Length = 196 Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 94/197 (47%), Gaps = 10/197 (5%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 + +L E L+ + K +Q+ F + + ++ + + I C C + E Sbjct: 6 IQKLEELLKTVFDFTKKQSQKFIFNIFKSSSEDIDQICNQIKALRNSIKKCNICNRYNEN 65 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 +CNIC + R + Q+ +V + DI E G + G+YFV ++S + +D + Sbjct: 66 TICNICLDTNRTK--QLMLVGNSLDIDKFENIGLYKGKYFVFDQNIS----LKNEDFIVS 119 Query: 127 RLEQRLAE--EKITEVILATNPTVEGEATANYIAELCAQY--DVEASRIAHGVPVGGELE 182 L ++L + + E+IL+ +PT+EG+ +YI + +++ G+P+G +E Sbjct: 120 SLLEKLIDILKDKNELILSLSPTIEGQFNMHYIKKFLKNKINFTNVFQLSTGIPLGSSVE 179 Query: 183 MVDGTTLSHSLAGRHKI 199 +D TL SL + K+ Sbjct: 180 YIDQDTLKESLLNKIKM 196 >UniRef50_Q4A8A7 Recombination protein recR n=4 Tax=Mycoplasma RepID=Q4A8A7_MYCH7 Length = 194 Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 6/193 (3%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L E LR +PG+ K A R+ L+ +A+ +C C Sbjct: 6 FKNLAEDLRKIPGISKKQAMRILSFLVDVPIEKIENFVRAICDLKKNTQYCEKCGYLNTN 65 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 VC IC + +R + +I VVE+ I E+ G++ G+YFV + + + + + Sbjct: 66 PVCEICLDFQR--SFKILVVENTEMIAKFEEYGKYDGQYFVFGKY--DIKNLENHNAQIK 121 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 +L A + +E+IL + T+EG ANY+A+ ++ +R+A G+P G ++ +D Sbjct: 122 KLADLAANK--SEIILGLSSTMEGLIFANYLAKHEFLSGLKITRLATGIPFGAIIDYIDN 179 Query: 187 TTLSHSLAGRHKI 199 TL +L R ++ Sbjct: 180 ITLDQALKNRQEM 192 >UniRef50_B3PM36 Recombination protein RecR n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM36_MYCA5 Length = 196 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 8/197 (4%) Query: 6 LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTE 65 LL +L L+ + G+ K + +L + +A + + C C F+ Sbjct: 5 LLNKLTIKLKAIQGLNKKQITAIVEYILNAESGELDDIAMLIKTIKTTYKKCLFCNNFSS 64 Query: 66 QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGL 125 QE C ICS+ R+ ++ VVE+ I E + G+YF+L +P P+ + Sbjct: 65 QEKCEICSDSTRE--NKLMVVENAKTIKQFEVAQIYRGKYFILEALYNPK---KPNLLFN 119 Query: 126 DRLEQ-RLAEEKITEVILATNPTVEGEATANYIAELC--AQYDVEASRIAHGVPVGGELE 182 LE+ L K EV+LA +PT+EG T +Y+ + A ++A G+P+G +E Sbjct: 120 KNLEKLLLIATKANEVVLALSPTIEGAITMDYLKKSLRDANNMHNVYQLATGIPLGVNVE 179 Query: 183 MVDGTTLSHSLAGRHKI 199 +D TL S + K Sbjct: 180 YIDSETLKQSFLKKTKF 196 >UniRef50_D0GR72 Putative uncharacterized protein n=1 Tax=Vibrio mimicus MB-451 RepID=D0GR72_VIBMI Length = 37 Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust. Identities = 18/23 (78%), Positives = 20/23 (86%) Query: 1 MQTSPLLTQLMEALRCLPGVGPK 23 M+TS +L LMEALRCLPGVGPK Sbjct: 1 MRTSHMLEHLMEALRCLPGVGPK 23 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C9KLD0 Recombination protein RecR n=1 Tax=Mitsuokella m... 317 1e-85 UniRef50_P74533 Recombination protein recR n=254 Tax=cellular or... 313 2e-84 UniRef50_B1YGD0 Recombination protein recR n=96 Tax=Bacteria Rep... 312 6e-84 UniRef50_Q3A7K8 Recombination protein recR n=8 Tax=Bacteria RepI... 308 5e-83 UniRef50_Q1IY76 Recombination protein recR n=172 Tax=Bacteria Re... 308 7e-83 UniRef50_B2TR53 Recombination protein recR n=5 Tax=Firmicutes Re... 307 1e-82 UniRef50_D2NPN6 Recombinational DNA repair protein n=8 Tax=Bacte... 304 1e-81 UniRef50_Q38YT8 Recombination protein recR n=11 Tax=Bacteria Rep... 302 5e-81 UniRef50_Q045U7 Recombination protein recR n=130 Tax=Firmicutes ... 301 1e-80 UniRef50_C4K7W2 Recombination protein recR n=48 Tax=Bacteria Rep... 298 5e-80 UniRef50_A0L8F5 Recombination protein recR n=5 Tax=Proteobacteri... 294 1e-78 UniRef50_C2D9P1 Recombination protein RecR n=1 Tax=Atopobium vag... 292 4e-78 UniRef50_A5FRM7 Recombination protein recR n=22 Tax=Bacteria Rep... 292 5e-78 UniRef50_C3RP48 Recombination protein recR n=6 Tax=Bacteria RepI... 291 9e-78 UniRef50_Q74GZ7 Recombination protein recR n=2 Tax=Deltaproteoba... 291 9e-78 UniRef50_Q8RG96 Recombination protein recR n=12 Tax=Fusobacteria... 290 2e-77 UniRef50_Q03ZG8 Recombination protein recR n=31 Tax=Firmicutes R... 289 4e-77 UniRef50_Q2LYF5 Recombination protein recR n=3 Tax=Bacteria RepI... 288 8e-77 UniRef50_A8ZU38 Recombination protein recR n=2 Tax=Desulfobacter... 287 2e-76 UniRef50_B9XNI6 Recombination protein RecR n=1 Tax=bacterium Ell... 286 3e-76 UniRef50_A1AKR3 Recombination protein recR n=3 Tax=Desulfuromona... 286 4e-76 UniRef50_A7NFA0 Recombination protein recR n=7 Tax=Bacteria RepI... 286 4e-76 UniRef50_C7GZD8 Recombination protein RecR n=1 Tax=Eubacterium s... 285 5e-76 UniRef50_B5YKY1 Recombination protein RecR n=1 Tax=Thermodesulfo... 285 6e-76 UniRef50_Q4FTL1 Recombination protein recR n=3 Tax=Gammaproteoba... 285 6e-76 UniRef50_C7RH59 Recombination protein RecR n=2 Tax=Anaerococcus ... 285 7e-76 UniRef50_Q2RZH8 Recombination protein recR n=1 Tax=Salinibacter ... 285 8e-76 UniRef50_UPI0000E87F50 recombination protein RecR n=1 Tax=Methyl... 284 8e-76 UniRef50_A5G9K4 Recombination protein recR n=2 Tax=Deltaproteoba... 284 1e-75 UniRef50_A1HM03 Recombination protein RecR n=5 Tax=Bacteria RepI... 284 2e-75 UniRef50_C2CG29 Recombination protein RecR n=4 Tax=Clostridiales... 283 2e-75 UniRef50_B4D3F8 Recombination protein RecR n=1 Tax=Chthoniobacte... 282 4e-75 UniRef50_Q12B97 Recombination protein recR n=671 Tax=Proteobacte... 282 5e-75 UniRef50_D0LUK9 Recombination protein RecR n=3 Tax=Bacteria RepI... 282 6e-75 UniRef50_A1BFN2 Recombination protein recR n=17 Tax=Bacteria Rep... 281 7e-75 UniRef50_C8PX50 Recombination protein RecR n=1 Tax=Enhydrobacter... 280 2e-74 UniRef50_B1GZS8 Recombination protein recR n=1 Tax=uncultured Te... 279 3e-74 UniRef50_D1VUH0 Recombination protein RecR n=1 Tax=Peptoniphilus... 279 3e-74 UniRef50_Q115W2 DNA replication and repair protein RecR n=5 Tax=... 278 8e-74 UniRef50_C7M1M5 Recombination protein RecR n=1 Tax=Acidimicrobiu... 278 1e-73 UniRef50_Q5ZRX0 Recombination protein recR n=10 Tax=Gammaproteob... 277 1e-73 UniRef50_Q6MAF1 Recombination protein recR n=1 Tax=Candidatus Pr... 277 2e-73 UniRef50_Q04NX9 Recombination protein recR n=6 Tax=Leptospira Re... 276 4e-73 UniRef50_Q7UQ68 Recombination protein recR n=3 Tax=Planctomyceta... 275 6e-73 UniRef50_A4QAN3 Recombination protein recR n=14 Tax=Corynebacter... 275 6e-73 UniRef50_A3ZPF3 Recombinant protein RecR n=3 Tax=Planctomycetace... 275 7e-73 UniRef50_A6LBX7 Recombination protein recR n=84 Tax=cellular org... 275 8e-73 UniRef50_D1R5I7 Putative uncharacterized protein n=1 Tax=Parachl... 274 1e-72 UniRef50_B2KES1 Recombination protein RecR n=1 Tax=Elusimicrobiu... 274 1e-72 UniRef50_Q1Q3A9 Strongly similar to recombination protein RecR n... 274 1e-72 UniRef50_A9HZ10 Recombination protein recR n=9 Tax=Burkholderial... 274 2e-72 UniRef50_Q4JSL5 Recombination protein recR n=8 Tax=Corynebacteri... 273 3e-72 UniRef50_C7N9F2 Recombination protein RecR n=6 Tax=Fusobacteriac... 272 4e-72 UniRef50_O83969 Recombination protein recR n=3 Tax=Treponema Rep... 272 6e-72 UniRef50_B0VGB5 Recombination protein RecR n=1 Tax=Candidatus Cl... 271 8e-72 UniRef50_D1B5E4 Recombination protein RecR n=1 Tax=Thermanaerovi... 271 1e-71 UniRef50_C0QUF6 Recombination protein RecR n=4 Tax=Aquificales R... 270 2e-71 UniRef50_Q0B0W3 Recombination protein recR n=1 Tax=Syntrophomona... 269 4e-71 UniRef50_D2MMY3 Recombination protein RecR n=1 Tax=Bulleidia ext... 269 5e-71 UniRef50_A6DLE7 Recombination protein RecR n=1 Tax=Lentisphaera ... 269 6e-71 UniRef50_C9RQ73 Recombination protein RecR n=1 Tax=Fibrobacter s... 268 8e-71 UniRef50_A9NE31 Recombination DNA repair protein n=1 Tax=Acholep... 268 9e-71 UniRef50_C6HVG6 Recombination protein RecR n=1 Tax=Leptospirillu... 267 1e-70 UniRef50_B0S0K8 Recombination protein recR n=2 Tax=Finegoldia ma... 267 2e-70 UniRef50_B3DWR4 Recombinational DNA repair protein RecR n=1 Tax=... 266 4e-70 UniRef50_A5EY33 Recombination protein recR n=2 Tax=Gammaproteoba... 265 6e-70 UniRef50_C8P1Z7 Recombination protein RecR n=1 Tax=Erysipelothri... 265 7e-70 UniRef50_B2UKM6 Recombination protein RecR n=1 Tax=Akkermansia m... 264 1e-69 UniRef50_UPI00016B25D7 recombination protein RecR n=1 Tax=candid... 262 3e-69 UniRef50_Q0EXX1 Recombination protein RecR n=1 Tax=Mariprofundus... 262 5e-69 UniRef50_D0RR34 Recombination protein RecR n=1 Tax=alpha proteob... 259 3e-68 UniRef50_Q73FZ1 Recombination protein recR n=14 Tax=Rickettsiale... 257 2e-67 UniRef50_B5Y7S4 Recombination protein RecR n=1 Tax=Coprothermoba... 256 3e-67 UniRef50_C1TMJ9 Recombination protein RecR n=3 Tax=Synergistacea... 256 4e-67 UniRef50_C0QZV8 Recombination protein recR n=1 Tax=Brachyspira h... 254 1e-66 UniRef50_UPI000174441B recombination protein RecR n=1 Tax=Verruc... 253 3e-66 UniRef50_B2S0G5 Recombination protein RecR n=4 Tax=Borrelia RepI... 252 4e-66 UniRef50_C1QBW2 Recombination protein RecR n=1 Tax=Brachyspira m... 252 4e-66 UniRef50_Q5PB75 Recombination protein recR n=5 Tax=Anaplasma Rep... 251 8e-66 UniRef50_B3R068 Recombination protein recR n=1 Tax=Candidatus Ph... 249 3e-65 UniRef50_B0TY95 Recombination protein recR n=18 Tax=Francisella ... 249 4e-65 UniRef50_B7CCG8 Putative uncharacterized protein n=1 Tax=Eubacte... 249 6e-65 UniRef50_B1ZW44 Recombination protein RecR n=3 Tax=Verrucomicrob... 246 4e-64 UniRef50_A9GQA8 DNA repair and genetic recombination protein n=2... 244 9e-64 UniRef50_Q4FNA8 Recombination protein recR n=5 Tax=root RepID=RE... 244 2e-63 UniRef50_Q0BVJ5 Recombination protein recR n=184 Tax=Bacteria Re... 243 2e-63 UniRef50_D1NBH0 Recombination protein RecR n=1 Tax=Victivallis v... 242 6e-63 UniRef50_Q1MPV5 Recombinational DNA repair protein (RecF pathway... 241 1e-62 UniRef50_B8DQU5 Recombination protein recR n=13 Tax=Desulfovibri... 241 1e-62 UniRef50_O67455 Recombination protein recR n=3 Tax=Aquificales R... 240 2e-62 UniRef50_Q3KMC2 Recombination protein recR n=12 Tax=Chlamydiacea... 239 3e-62 UniRef50_A5CCA2 Recombination protein recR n=17 Tax=Rickettsieae... 238 8e-62 UniRef50_A4BJR1 Recombination protein RecR n=1 Tax=Reinekea blan... 236 3e-61 UniRef50_D0W4J6 Recombination protein RecR n=3 Tax=Neisseriaceae... 232 6e-60 UniRef50_B1AI75 Recombination protein recR n=15 Tax=Ureaplasma R... 231 1e-59 UniRef50_Q7NAN7 RecR n=2 Tax=Mycoplasma gallisepticum RepID=Q7NA... 223 4e-57 UniRef50_B9L9M2 Recombination protein RecR n=1 Tax=Nautilia prof... 220 2e-56 UniRef50_Q98RF8 Recombination protein recR n=1 Tax=Mycoplasma pu... 220 2e-56 UniRef50_B4U725 Recombination protein RecR n=1 Tax=Hydrogenobacu... 219 6e-56 UniRef50_A1W0P8 Recombination protein recR n=21 Tax=Epsilonprote... 215 5e-55 UniRef50_C8PFQ8 Recombination protein RecR n=1 Tax=Campylobacter... 215 8e-55 UniRef50_Q2STA5 DNA repair protein RecM n=5 Tax=Mollicutes RepID... 215 1e-54 UniRef50_C3XMA4 Recombination protein RecR n=3 Tax=Helicobacter ... 214 2e-54 UniRef50_Q17WX2 Recombination protein recR n=17 Tax=Helicobacter... 214 2e-54 UniRef50_C4XFW1 Putative uncharacterized protein n=1 Tax=Mycopla... 213 3e-54 UniRef50_A8EUC6 Recombination protein RecR n=6 Tax=Campylobacter... 209 3e-53 UniRef50_Q6KIL5 Recombination protein n=1 Tax=Mycoplasma mobile ... 208 8e-53 UniRef50_Q30R19 DNA replication and repair protein RecR n=4 Tax=... 208 9e-53 UniRef50_Q8EUW2 Recombinational DNA repair protein RecR n=1 Tax=... 208 1e-52 UniRef50_A5IZC7 Recombination protein RecR n=1 Tax=Mycoplasma ag... 206 3e-52 UniRef50_Q4A6Z7 Putative recombination protein n=1 Tax=Mycoplasm... 204 1e-51 UniRef50_Q4A8A7 Recombination protein recR n=4 Tax=Mycoplasma Re... 198 9e-50 UniRef50_Q14QH4 Putative recombination protein recr dna repair n... 194 1e-48 UniRef50_B1VIS4 Recombination protein n=1 Tax=Corynebacterium ur... 186 4e-46 UniRef50_B3PM36 Recombination protein RecR n=1 Tax=Mycoplasma ar... 184 1e-45 UniRef50_D1J7N4 Recombination protein recR n=1 Tax=Mycoplasma ho... 179 4e-44 Sequences not found previously or not previously below threshold: UniRef50_Q08SU2 Recombination protein RecR (Fragment) n=1 Tax=St... 55 2e-06 UniRef50_Q8R979 Topoisomerase n=14 Tax=Bacteria RepID=RGYR_THETN 52 1e-05 UniRef50_A9FRC6 DNA topoisomerase I n=1 Tax=Sorangium cellulosum... 45 0.001 UniRef50_D0LR99 DNA topoisomerase n=169 Tax=cellular organisms R... 45 0.002 UniRef50_B3PMD8 DNA topoisomerase I n=3 Tax=Mycoplasma RepID=B3P... 45 0.002 UniRef50_B9MRC8 Reverse gyrase n=1 Tax=Anaerocellum thermophilum... 43 0.004 UniRef50_Q3A7H8 DNA topoisomerase n=13 Tax=Bacteria RepID=Q3A7H8... 43 0.005 UniRef50_B8E2F6 DNA topoisomerase n=1 Tax=Dictyoglomus turgidum ... 43 0.006 UniRef50_C5CFS3 Holliday junction ATP-dependent DNA helicase ruv... 43 0.006 UniRef50_B5YFC7 DNA topoisomerase n=1 Tax=Dictyoglomus thermophi... 43 0.008 UniRef50_Q9JN65 DNA topoisomerase 1 n=2 Tax=Mycoplasma gallisept... 42 0.015 UniRef50_B1VAJ5 DNA topoisomerase n=6 Tax=Acholeplasmataceae Rep... 41 0.015 UniRef50_D1BLL7 Holliday junction DNA helicase RuvA n=3 Tax=Veil... 41 0.017 UniRef50_Q3SMS7 DNA topoisomerase n=8 Tax=Proteobacteria RepID=Q... 41 0.030 UniRef50_Q9X3X7 DNA topoisomerase 1 n=7 Tax=cellular organisms R... 41 0.030 UniRef50_A8F8Q5 RuvA domain protein n=1 Tax=Thermotoga lettingae... 41 0.031 UniRef50_O28948 Putative uncharacterized protein n=1 Tax=Archaeo... 40 0.039 UniRef50_B4ST34 Holliday junction ATP-dependent DNA helicase ruv... 40 0.044 UniRef50_UPI0001BCCB68 Holliday junction DNA helicase RuvA n=1 T... 40 0.045 UniRef50_A6DCG6 Holliday junction DNA helicase motor protein n=1... 40 0.050 UniRef50_A6LLH1 Holliday junction ATP-dependent DNA helicase ruv... 40 0.059 UniRef50_Q2LT40 DNA topoisomerase n=2 Tax=Bacteria RepID=Q2LT40_... 40 0.063 UniRef50_B5YKX8 DNA topoisomerase n=1 Tax=Thermodesulfovibrio ye... 40 0.065 UniRef50_Q1NVI5 DNA recombination protein, RuvA:Helix-hairpin-he... 39 0.088 UniRef50_C5NYW8 DNA topoisomerase n=1 Tax=Gemella haemolysans AT... 39 0.093 >UniRef50_C9KLD0 Recombination protein RecR n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLD0_9FIRM Length = 198 Score = 317 bits (814), Expect = 1e-85, Method: Composition-based stats. Identities = 88/199 (44%), Positives = 125/199 (62%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ L L+E R LPG+G K+A R+A+ +L D + LA A+ A +IG+C C Sbjct: 1 MQYIAPLANLIEHFRALPGIGQKTAVRLAYHVLDMDPAQARALASAIIDAKEKIGYCNTC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 ++Q C IC++ R ++ ICVVE P D+ A+E+ + G Y VL G LSPL+GIGP Sbjct: 61 FNLSDQNPCAICASDER-DHSVICVVEQPQDVAAMERMRDYQGVYHVLHGALSPLEGIGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 DI + L RL ++ + EVI+ATNP VEGEAT YIA+L ++ +RIAHG+P+GG+ Sbjct: 120 SDIRIKELLGRLQDDTVKEVIMATNPNVEGEATTMYIAKLLKPLGIKVTRIAHGLPIGGD 179 Query: 181 LEMVDGTTLSHSLAGRHKI 199 LE D TL+ ++ R +I Sbjct: 180 LEYADEVTLAKAMENRREI 198 >UniRef50_P74533 Recombination protein recR n=254 Tax=cellular organisms RepID=RECR_SYNY3 Length = 232 Score = 313 bits (803), Expect = 2e-84, Method: Composition-based stats. Identities = 87/197 (44%), Positives = 130/197 (65%), Gaps = 2/197 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 +P L +L+E L+ LP VGPK+AQR+A LL+R + LAQAL A +G C C Sbjct: 38 YTPPLARLIEQLQRLPSVGPKTAQRLALHLLKRPDAEVENLAQALLDAKKRVGQCQVCFH 97 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 + + VC+IC +P+R +N ICVV P D+ A+E+T +F G+Y VL G +SP+DGIGP+ Sbjct: 98 LSAEPVCDICRHPQR-DNSVICVVSDPRDVIALEKTREFRGKYHVLGGVISPMDGIGPEQ 156 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + + L R+++ +I EVILA +P+VEGE T Y+ +L + + +RIA G+P+GG+LE Sbjct: 157 LTIQPLLHRVSQPEIKEVILAISPSVEGETTTLYLGKLLQPF-TKVTRIAFGLPMGGDLE 215 Query: 183 MVDGTTLSHSLAGRHKI 199 D TL+ +L GR ++ Sbjct: 216 YADEVTLARALEGRREL 232 >UniRef50_B1YGD0 Recombination protein recR n=96 Tax=Bacteria RepID=RECR_EXIS2 Length = 199 Score = 312 bits (800), Expect = 6e-84, Method: Composition-based stats. Identities = 83/200 (41%), Positives = 127/200 (63%), Gaps = 2/200 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ +++L+E+ LPG+GPK+A R+AF +L + + +AL A +I +C+ C Sbjct: 1 MQYPEAISRLIESFTKLPGIGPKTAVRLAFHVLDMEEDDVLMFGKALVSAKRDISYCSIC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T+++ C +CS+ R +CVV+ D+ A+E+ + G Y VL G +SP++GIGP Sbjct: 61 GNITDKDPCYVCSDKHRN-RTIVCVVQDSRDVIAMEKMRDYQGLYHVLHGAISPMEGIGP 119 Query: 121 DDIGLDRLEQRLA-EEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 +DI + L RL +E ITE+ILATNP +EGEATA Y++ L + +RIAHG+PVGG Sbjct: 120 EDINVSSLLTRLQADEAITEIILATNPNIEGEATAMYLSRLLKPTGIRVTRIAHGLPVGG 179 Query: 180 ELEMVDGTTLSHSLAGRHKI 199 +LE D TLS ++ GR ++ Sbjct: 180 DLEYADEVTLSRAMEGRREL 199 >UniRef50_Q3A7K8 Recombination protein recR n=8 Tax=Bacteria RepID=RECR_PELCD Length = 199 Score = 308 bits (791), Expect = 5e-83, Method: Composition-based stats. Identities = 82/199 (41%), Positives = 127/199 (63%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 ++ +P +L+ LPG+G K+A R+ +L++ + L +A+ C+ C Sbjct: 2 VKFTPSFNRLVGEFAKLPGIGRKTAVRLTLFMLRQTSQDALALGEAVRELKERTRFCSRC 61 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 FTE++ C +C++ R + ICVVE P D+ AIE++ F GRY VL G LSPLDGIGP Sbjct: 62 FYFTEEDPCPLCTDVGRDD-QLICVVEEPQDVIAIERSRSFRGRYHVLHGSLSPLDGIGP 120 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 DD+ +D L +RL + + EV+LATN VEGEATA Y+A++ + V+ +R+AHG+P G + Sbjct: 121 DDLKIDALLERLQQNNVKEVLLATNFDVEGEATALYLAKVIQPFGVKVTRLAHGIPTGSD 180 Query: 181 LEMVDGTTLSHSLAGRHKI 199 LE VD T++H++ GR ++ Sbjct: 181 LEYVDEATVNHAVEGRREL 199 >UniRef50_Q1IY76 Recombination protein recR n=172 Tax=Bacteria RepID=RECR_DEIGD Length = 222 Score = 308 bits (790), Expect = 7e-83, Method: Composition-based stats. Identities = 90/199 (45%), Positives = 125/199 (62%), Gaps = 3/199 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ P L L+ L LPG+GPKSAQR+AF L ++ R RLA A+ A ++ C C Sbjct: 1 MKYPPSLVGLIRELSRLPGIGPKSAQRLAFYLFEQPREDIERLAGAILEAKRDLHTCPVC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T+ E C++CS+P R ++ ICVVE P D+ AIE++G++ G Y VL G LSP++G+GP Sbjct: 61 FNITDAERCDVCSDPTRDQS-VICVVEEPGDVIAIERSGEYRGLYHVLHGALSPMNGVGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 D + + L R+ + EVILAT TVEG+ATA Y+ L SRIA+G+PVGG Sbjct: 120 DRLQIRPLLPRVQDG--MEVILATGTTVEGDATALYLQRLLEPLGAVVSRIAYGLPVGGA 177 Query: 181 LEMVDGTTLSHSLAGRHKI 199 LE D TL +L+GR ++ Sbjct: 178 LEYADEVTLGRALSGRRRV 196 >UniRef50_B2TR53 Recombination protein recR n=5 Tax=Firmicutes RepID=RECR_CLOBB Length = 198 Score = 307 bits (788), Expect = 1e-82, Method: Composition-based stats. Identities = 90/200 (45%), Positives = 125/200 (62%), Gaps = 3/200 (1%) Query: 1 MQTSP-LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCAD 59 M+ P + +L+E LP +G K+AQR+A +L A AL +A I +C+ Sbjct: 1 MEFYPVAIEKLIEEFAKLPSIGKKTAQRLALHILNLPNDEVREFATALVKARGTIKYCST 60 Query: 60 CRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 C FT+ + C +CSNP R ++ ICVVE P DI +E+ +F+G Y VL G++SP+ G G Sbjct: 61 CGNFTDTDPCALCSNPNRDKS-TICVVEQPKDIMTMEKVKEFNGLYHVLHGNISPMQGRG 119 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 P DI + L R+ E+ EVILATNP +EGEATA YIA++ DV+ +RIA G+PVGG Sbjct: 120 PQDIKIRELVARM-NEEAKEVILATNPNIEGEATAMYIAKVLKPLDVKVTRIAAGIPVGG 178 Query: 180 ELEMVDGTTLSHSLAGRHKI 199 +LE D TLS +L GR +I Sbjct: 179 DLEYADEVTLSKALEGRKEI 198 >UniRef50_D2NPN6 Recombinational DNA repair protein n=8 Tax=Bacteria RepID=D2NPN6_9MICC Length = 384 Score = 304 bits (780), Expect = 1e-81, Method: Composition-based stats. Identities = 86/197 (43%), Positives = 124/197 (62%), Gaps = 1/197 (0%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 + L++ L LPGVGPKSAQR+AF +L D + RLA A++ + + C +C Sbjct: 2 YEGAVQNLIDELGRLPGVGPKSAQRIAFHILNADAADMARLANAISTVKTSVSFCEECGN 61 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 +E ++C IC + RR + +CVVE D+ AIE+T F+GRY VL G ++PL G+GP+ Sbjct: 62 VSETKLCTICRDERRDPS-VLCVVEESKDVVAIERTRSFTGRYHVLGGAINPLAGVGPEQ 120 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + + L RLA+E+I E+ILA +P +EGEATA Y++ + V SR+A G+PVGG+LE Sbjct: 121 LRIRELVSRLADERIQEIILAMDPNLEGEATATYLSRMLVPLGVRLSRLASGLPVGGDLE 180 Query: 183 MVDGTTLSHSLAGRHKI 199 D TL +L GR I Sbjct: 181 YADEITLGRALEGRRVI 197 >UniRef50_Q38YT8 Recombination protein recR n=11 Tax=Bacteria RepID=RECR_LACSS Length = 198 Score = 302 bits (774), Expect = 5e-81, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 117/199 (58%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ + +L+E+ LPG+G K+A R+AF + + A+ L A ++ +C+ C Sbjct: 1 MQYPEPIAKLIESYMKLPGIGNKTATRLAFYTIDMNEDDVTNFAKNLISARRDLHYCSVC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T+++ C IC + R + + VVE P D+ ++E+ + G Y VL G LSP++G GP Sbjct: 61 GNITDEDPCEICRDTARSQEMIL-VVEQPKDVMSMERMNDYHGLYHVLHGVLSPIEGKGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 DDI + L +RL + EVI+ATN T EGEATA YI+ L ++ +R+AHG+ VG + Sbjct: 120 DDINIANLIKRLQKTPAKEVIIATNATPEGEATAMYISRLIKPAGIKVTRLAHGLAVGSD 179 Query: 181 LEMVDGTTLSHSLAGRHKI 199 +E D TL ++ GR +I Sbjct: 180 IEYADEMTLLKAVEGRQEI 198 >UniRef50_Q045U7 Recombination protein recR n=130 Tax=Firmicutes RepID=RECR_LACGA Length = 199 Score = 301 bits (771), Expect = 1e-80, Method: Composition-based stats. Identities = 71/200 (35%), Positives = 116/200 (58%), Gaps = 2/200 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ + +L++ LPG+G K+A R+AF + +++L + + C+ C Sbjct: 1 MQYPLPIARLIDNYMKLPGIGEKTATRLAFYTMDMPEDDVEDFSKSLIQVKENLHSCSIC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 TE + C IC + R + I VVE P D+ A E+ G+++G Y VL G LSP+DG+GP Sbjct: 61 GNITESDPCEICRDANR-DRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGP 119 Query: 121 DDIGLDRLEQRL-AEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 ++I + L RL ++++ EVILA N + EGEATA Y+A+L ++ +R+A G+ VG Sbjct: 120 EEINIKSLITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGS 179 Query: 180 ELEMVDGTTLSHSLAGRHKI 199 ++E + TL ++ GR + Sbjct: 180 DIEYANSITLKRAVQGRTDL 199 >UniRef50_C4K7W2 Recombination protein recR n=48 Tax=Bacteria RepID=RECR_HAMD5 Length = 202 Score = 298 bits (765), Expect = 5e-80, Method: Composition-based stats. Identities = 145/201 (72%), Positives = 168/201 (83%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQTS ++ LME+LR LPGVGPKSAQRMAF LLQ DRS G+RLA++L +AMSEIGHC C Sbjct: 1 MQTSLVIEALMESLRHLPGVGPKSAQRMAFYLLQSDRSKGIRLAESLLKAMSEIGHCGVC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 RTFTEQ C+ICSN R++ GQICVVESP+DI AIEQTGQFSGRYFVLMG LSPLDGIGP Sbjct: 61 RTFTEQPCCDICSNVYREKMGQICVVESPSDICAIEQTGQFSGRYFVLMGRLSPLDGIGP 120 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 DDIGL LE RL+ E I EVILA NPTVEGEAT+NYIA++C +Y + ++IAHGVP+GG+ Sbjct: 121 DDIGLPLLEHRLSTEPIKEVILAMNPTVEGEATSNYIAQMCEEYGISTTKIAHGVPIGGD 180 Query: 181 LEMVDGTTLSHSLAGRHKIRF 201 LEMVD TTLSH+L GR + F Sbjct: 181 LEMVDETTLSHALVGRRPMNF 201 >UniRef50_A0L8F5 Recombination protein recR n=5 Tax=Proteobacteria RepID=RECR_MAGSM Length = 200 Score = 294 bits (753), Expect = 1e-78, Method: Composition-based stats. Identities = 89/195 (45%), Positives = 122/195 (62%), Gaps = 1/195 (0%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 P L + +E LPGVG KSAQRM + LL+ L Q L I C C Sbjct: 6 PTLERSIELFSRLPGVGRKSAQRMVYHLLKEGGREATLLGQGLLALSERIHFCEVCHNLA 65 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 E+ +C IC + +R ++G ICVVE P D+ A+E+ G + G Y VL G LSP+DGIGPD + Sbjct: 66 EEGLCAICQDSKR-DHGLICVVEEPVDVLAMERAGAYRGLYHVLGGRLSPMDGIGPDALY 124 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 LD L +RL + + E+I+ATNPTV GEATA+YI +L ++ SR+A+G+P+GGELE + Sbjct: 125 LDALLERLQQGGVRELIIATNPTVAGEATAHYITQLAQPLTIDISRLAYGMPMGGELEYL 184 Query: 185 DGTTLSHSLAGRHKI 199 D +TL +L GR + Sbjct: 185 DESTLFQALQGRRGV 199 >UniRef50_C2D9P1 Recombination protein RecR n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9P1_9ACTN Length = 200 Score = 292 bits (749), Expect = 4e-78, Method: Composition-based stats. Identities = 80/195 (41%), Positives = 121/195 (62%), Gaps = 1/195 (0%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 L +++ LPG+GPKSAQR+A+ L++ D RL++A+ + C C + Sbjct: 7 QALQFVLDEFGRLPGIGPKSAQRIAYFLMEADDETARRLSRAILNLKEHVHFCPVCFAYA 66 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 +VC +C++ R + ++CVV P DI +IE+TG + G Y VL G +SP+D IGP+ + Sbjct: 67 TDDVCALCNDSTR-DVSKVCVVCEPRDIASIEKTGVYHGLYHVLGGVISPMDKIGPEQLH 125 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 + L RLA ++I EVILA NPTVEGE TA Y+A ++ +R+A G+PVGG+LE V Sbjct: 126 VKELLARLAGDEIKEVILAMNPTVEGETTATYLARTIKTLGIQTTRLASGLPVGGDLEYV 185 Query: 185 DGTTLSHSLAGRHKI 199 D TL ++ RH++ Sbjct: 186 DEVTLGRAIEARHEM 200 >UniRef50_A5FRM7 Recombination protein recR n=22 Tax=Bacteria RepID=RECR_DEHSB Length = 204 Score = 292 bits (748), Expect = 5e-78, Method: Composition-based stats. Identities = 80/198 (40%), Positives = 120/198 (60%), Gaps = 1/198 (0%) Query: 2 QTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCR 61 T+ ++ +L+++L LPG+GPKSAQR+AF L++ + L+ + ++I C C Sbjct: 8 STAGVVNKLIDSLGKLPGIGPKSAQRLAFYLMRAPEDQVISLSDTIRNIKNQISQCRICC 67 Query: 62 TFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 + E+C IC N +R+ +ICVVE P DI A+E G + G Y VL G +SP +GI Sbjct: 68 NVADSELCPICQNTKRE-TNKICVVEQPQDILALEHVGVYRGYYHVLHGAISPTEGITSQ 126 Query: 122 DIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGEL 181 +I ++ L RL ++ E+ILATNPT EGEATA Y++ L ++ +R+A G+P G EL Sbjct: 127 NIRINELMVRLDNGQVEEIILATNPTTEGEATAMYLSRLITPLGIKVTRLARGLPFGTEL 186 Query: 182 EMVDGTTLSHSLAGRHKI 199 E D TLS ++ GR Sbjct: 187 EYADDVTLSRAMEGRQNF 204 >UniRef50_C3RP48 Recombination protein recR n=6 Tax=Bacteria RepID=C3RP48_9MOLU Length = 197 Score = 291 bits (746), Expect = 9e-78, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 122/199 (61%), Gaps = 2/199 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M L++ + LPG+G KSA+R+A+ +L D+ + A+ ++I +C C Sbjct: 1 MNYPQAFQDLVDCFKRLPGIGGKSAERLAYHVLSMDKKYVDEFSAAIGSIQTKIHYCKKC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 E E+C+IC +P R + IC+VE P D++A+E+ ++ G Y VL G +S +DG Sbjct: 61 GHICEGEICDICQDPDRDQT-TICIVEDPKDVFAMEKVKEYHGLYHVLHGAMSIMDGKTM 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 DD+ + L +RL ++ I EVI+ATNPT +GE TA Y+A+L ++ ++ SRIA+G+P+G Sbjct: 120 DDLNIASLFERL-DDSIKEVIIATNPTRDGETTALYLAKLLSKKNINTSRIANGLPIGSN 178 Query: 181 LEMVDGTTLSHSLAGRHKI 199 ++ D TL SL GR KI Sbjct: 179 IDYADELTLLKSLEGRKKI 197 >UniRef50_Q74GZ7 Recombination protein recR n=2 Tax=Deltaproteobacteria RepID=RECR_GEOSL Length = 197 Score = 291 bits (746), Expect = 9e-78, Method: Composition-based stats. Identities = 87/199 (43%), Positives = 125/199 (62%), Gaps = 3/199 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 + S L++L+ L+ LPGVG K+A R+AF LL+ + LA +L MS + C+ C Sbjct: 2 VHFSDSLSRLLAELQKLPGVGEKTALRLAFHLLKSPDN-AAALADSLRDVMSRVRFCSVC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 TE + C CS+ R ++G ICVVE P D+ A+E+T F GRY VL G LSPL+G+ P Sbjct: 61 FGITEDDPCRFCSDAR--DDGAICVVEEPQDLLAVERTRAFRGRYHVLQGALSPLNGVTP 118 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 D + + L +RL + EV++ATN TVEGEATA Y+A + V +R+AHG+P+G + Sbjct: 119 DRLRVAELMKRLEGGGVREVVIATNFTVEGEATALYLARMIKPLGVRVTRLAHGIPLGSD 178 Query: 181 LEMVDGTTLSHSLAGRHKI 199 LE VD T+ +L GR ++ Sbjct: 179 LEFVDAATVQRALEGRSEL 197 >UniRef50_Q8RG96 Recombination protein recR n=12 Tax=Fusobacteriaceae RepID=RECR_FUSNN Length = 197 Score = 290 bits (743), Expect = 2e-77, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 118/196 (60%), Gaps = 1/196 (0%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 + L +L+ LPGVG KSA R AF +L + A+AL + C C + Sbjct: 3 TKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHVCGNY 62 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 E + CNICS+ R ++ ICVVE DI +E+T +F G Y VL G L PL+GI P+++ Sbjct: 63 CESDTCNICSDNAR-DHRIICVVEESKDIMILEKTTKFRGVYHVLNGRLDPLNGITPNEL 121 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 + L +R+A++ I E+ILATNP +EGE TA Y+A+L + ++ +++A G+P+GG LE Sbjct: 122 NIKSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLEF 181 Query: 184 VDGTTLSHSLAGRHKI 199 D T+S +L R +I Sbjct: 182 SDTATISRALDDRIEI 197 >UniRef50_Q03ZG8 Recombination protein recR n=31 Tax=Firmicutes RepID=RECR_LEUMM Length = 201 Score = 289 bits (741), Expect = 4e-77, Method: Composition-based stats. Identities = 76/202 (37%), Positives = 117/202 (57%), Gaps = 4/202 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ + +L+++ LPG+GPK+A R+AF L + ++AL A +++ C+ C Sbjct: 1 MQYPEPIAKLIDSYTKLPGIGPKTATRLAFYTLGMNEEDVQDFSKALISAKTDLTFCSIC 60 Query: 61 RTFT--EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGI 118 T + + C IC + R ++ VVE+ D+ A+E T + G Y VL G +SP G Sbjct: 61 GNITATDTDPCVICRDQSRDQSTVF-VVENSRDVMAMENTRDYHGLYHVLNGVISPSAGT 119 Query: 119 GPDDIGLDRLEQRLAE-EKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPV 177 GP+DI L L +RL+E E+I EVI+ TN EGEATA Y+A L + +R+AHG+ V Sbjct: 120 GPEDINLPSLIRRLSEHEEIKEVIVGTNANAEGEATAMYLARLLKPAGIAVTRLAHGLAV 179 Query: 178 GGELEMVDGTTLSHSLAGRHKI 199 G +++ D TL ++ GR K+ Sbjct: 180 GSDIDYADELTLIKAVQGRTKL 201 >UniRef50_Q2LYF5 Recombination protein recR n=3 Tax=Bacteria RepID=RECR_SYNAS Length = 203 Score = 288 bits (738), Expect = 8e-77, Method: Composition-based stats. Identities = 83/200 (41%), Positives = 116/200 (58%), Gaps = 2/200 (1%) Query: 1 MQTSP-LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCAD 59 M P + L+ L LPG+G K+A R+A +L+ LA ++ +I C Sbjct: 1 MAGYPLPIKHLISELGKLPGIGEKTATRLAMHILRAPEGDARALADSILEVRDKIRFCRV 60 Query: 60 CRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 C F+E E+C +C + R ++ QICVVE P + AIE +G +SG Y VL G LSPLDGIG Sbjct: 61 CYNFSEAELCTVCRDSAR-DSSQICVVEDPDALMAIEDSGSYSGTYHVLHGVLSPLDGIG 119 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 P+ + L L +R+ E + EVILATNP V G++TA I+ + V +RIA GVP+G Sbjct: 120 PEQLKLRELVERIRESGVREVILATNPNVSGDSTALLISRMIGPLAVTVTRIAQGVPMGS 179 Query: 180 ELEMVDGTTLSHSLAGRHKI 199 +L +D TLS SL R + Sbjct: 180 DLRYMDRMTLSKSLEFRRGM 199 >UniRef50_A8ZU38 Recombination protein recR n=2 Tax=Desulfobacteraceae RepID=RECR_DESOH Length = 199 Score = 287 bits (735), Expect = 2e-76, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 P + + L LPG+G K+A+R+A LL LA++L C+ C T Sbjct: 4 YPPSIRNAISHLSRLPGIGQKTAERLAMHLLHVPDRAVHELARSLVDLKKNTRMCSVCFT 63 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 ++ VC IC +P R +CVVE P ++ AIE+T F G Y VL G LSP+DGIGPDD Sbjct: 64 LSDTPVCAICGDPDRN-ASLLCVVEGPTEVMAIEKTAAFKGVYHVLHGVLSPMDGIGPDD 122 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 I + L R+ + + E++LAT+ VEGEATA Y+ E+ + V +RIA G+P GGE+ Sbjct: 123 IRIRELVDRVKKGIVKEIVLATDTRVEGEATAAYLVEVLKPFPVTVTRIASGMPAGGEVR 182 Query: 183 MVDGTTLSHSLAGRHKI 199 D TL +++ R+ + Sbjct: 183 YSDPVTLKNAMEKRYAL 199 >UniRef50_B9XNI6 Recombination protein RecR n=1 Tax=bacterium Ellin514 RepID=B9XNI6_9BACT Length = 200 Score = 286 bits (733), Expect = 3e-76, Method: Composition-based stats. Identities = 93/196 (47%), Positives = 130/196 (66%), Gaps = 1/196 (0%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 +T L L LPG+GP+SA+R+A L+Q D S +LAQ L A I C C + Sbjct: 5 PEPITTLTGILSRLPGIGPRSAERLALHLVQSDVSEVKQLAQILVEARERIQTCPICGSL 64 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 TEQ C+ICS+ RR + G IC+VE P DI +IE++G F GRY VL G +SPL+G+GP+D+ Sbjct: 65 TEQTPCSICSDERR-DGGLICLVERPTDIISIEKSGTFHGRYHVLGGKISPLNGVGPEDL 123 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 + LE RL++E I E+++A VEG+AT+NY+A+ A+ + SRIAHG+P G LE Sbjct: 124 RISELESRLSQEPIKEIVVALGTDVEGDATSNYLAKKLARPGLRISRIAHGLPAGSGLEF 183 Query: 184 VDGTTLSHSLAGRHKI 199 D TL+H+LAGR ++ Sbjct: 184 ADELTLTHALAGRREM 199 >UniRef50_A1AKR3 Recombination protein recR n=3 Tax=Desulfuromonadales RepID=RECR_PELPD Length = 197 Score = 286 bits (732), Expect = 4e-76, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 123/196 (62%), Gaps = 3/196 (1%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 L++L+ L+ LPGVG ++A R+AF LL+ ++ L+++L S + C+ C Sbjct: 5 PSALSRLVGELKKLPGVGERTALRLAFHLLKTPQN-LTALSESLLEVKSRVRSCSICFAI 63 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 TE + C IC+ R + G ICVVE+ D+ A+E++ + G Y VL G +SPL GIGP ++ Sbjct: 64 TEDDPCAICAGDR--DTGTICVVENSQDLMALERSNAYHGTYHVLEGVISPLAGIGPSEL 121 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 + L R+ + EV++ATN TVEGEATA Y+A+L + SR+AHG+P+G ++E Sbjct: 122 RIAELLARIGRGGVDEVVIATNFTVEGEATALYLAKLLKPLGIRISRLAHGIPLGSDIEY 181 Query: 184 VDGTTLSHSLAGRHKI 199 VD T+ +L GR+++ Sbjct: 182 VDAATVQWALQGRNQL 197 >UniRef50_A7NFA0 Recombination protein recR n=7 Tax=Bacteria RepID=RECR_ROSCS Length = 205 Score = 286 bits (732), Expect = 4e-76, Method: Composition-based stats. Identities = 82/196 (41%), Positives = 117/196 (59%), Gaps = 1/196 (0%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 + +L+E L LPGVGPK+A R+ F LL+ LA AL ++ C+ C Sbjct: 11 PTPVIRLIEELSRLPGVGPKTASRLTFFLLRAPDELPRALANALIGLKQQVQLCSRCYFI 70 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 T+ ++C IC+NP R + +CVVE P D+ AIE+TG + G Y VL G ++PL+G+ +DI Sbjct: 71 TQNDLCAICANPARDQR-IVCVVEEPLDVVAIERTGVYRGLYHVLHGRIAPLEGMNREDI 129 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 D L R+ E I EVI+ATNP +EGEATA ++ A +R+A G+P GG+LE Sbjct: 130 YFDELLDRVRAEPIDEVIIATNPNLEGEATAFHLQRALAPLGARVTRLARGLPTGGDLEW 189 Query: 184 VDGTTLSHSLAGRHKI 199 D TL +L GR ++ Sbjct: 190 ADPGTLGSALEGRREM 205 >UniRef50_C7GZD8 Recombination protein RecR n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZD8_9FIRM Length = 198 Score = 285 bits (731), Expect = 5e-76, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 125/199 (62%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ L+ L LPG+G K+AQR+A + + + + +++A+ A++ + C C Sbjct: 1 MQFPVYFENLITELSRLPGIGRKTAQRLAIFITDMEDNKALSISRAIEEAVNNLKPCDTC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T+ C CS+P R ++ ICVVE+ DI A+E+ + GRY VL G +SPLDGIGP Sbjct: 61 GCLTDNGKCLFCSDPLRNDD-VICVVENTIDIVAMEKLKNYRGRYHVLGGVISPLDGIGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 D + +D L R+ + + EVILAT+ T+EGEATANYIA+ + ++A+RIA G+PVGG+ Sbjct: 120 DHLRIDTLLSRVVKYDVKEVILATSVTIEGEATANYIAKELEKLGIKATRIAKGIPVGGK 179 Query: 181 LEMVDGTTLSHSLAGRHKI 199 + +D T+ +++ R ++ Sbjct: 180 FDYIDAMTMQNAIDKREEM 198 >UniRef50_B5YKY1 Recombination protein RecR n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKY1_THEYD Length = 197 Score = 285 bits (730), Expect = 6e-76, Method: Composition-based stats. Identities = 83/197 (42%), Positives = 127/197 (64%), Gaps = 2/197 (1%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 S L L+E L LPG+G K+AQR+AF ++ + + +A+A+ + C+ C Sbjct: 2 SNPLENLIENLCKLPGIGRKTAQRLAFFIMNMPENEALEIAEAIINLKKKAKFCSVCFNI 61 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 TE E CNICSN R ++ ICVVE P++I E+TG + G Y VL G++SP+DG+ PD + Sbjct: 62 TENEKCNICSNSIR-DHSIICVVEEPSNIILFEKTG-YKGVYHVLGGNISPVDGLTPDKL 119 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 + LE+R+ +I EVI++T+P +GE TA +IA+L +Y+V+ SRIA+G+P+G ++E Sbjct: 120 KIKELEERVKTGQIREVIISTSPNTKGELTAQWIADLLKKYNVKISRIAYGLPIGIDIEF 179 Query: 184 VDGTTLSHSLAGRHKIR 200 D TLS +L GR + Sbjct: 180 ADEVTLSKALEGRKPVN 196 >UniRef50_Q4FTL1 Recombination protein recR n=3 Tax=Gammaproteobacteria RepID=RECR_PSYA2 Length = 197 Score = 285 bits (730), Expect = 6e-76, Method: Composition-based stats. Identities = 95/193 (49%), Positives = 132/193 (68%), Gaps = 1/193 (0%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 + QL++ LR LPGVG KSAQRMA LL + R GM LAQAL AM +I C C +F Sbjct: 3 TAKFDQLVKQLRILPGVGQKSAQRMALHLLTKKRPQGMALAQALDEAMRDIVECQRCHSF 62 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 ++ VC +C +PRR + +CVVE+ AD+ AIEQT + GRYFVL GHLSP+DGI DD+ Sbjct: 63 SDDAVCPLCQDPRRDD-ALLCVVETAADVMAIEQTAGYRGRYFVLGGHLSPIDGISADDL 121 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 +++L R+ +E + E+ILAT TVEG+ TA++I E +++ + +R+A GVP+GGELE Sbjct: 122 NIEQLVWRVKQEPVEELILATGTTVEGQTTAHFINEAVSRHVNKVTRLAQGVPMGGELEY 181 Query: 184 VDGTTLSHSLAGR 196 +D TL ++ R Sbjct: 182 LDSMTLGQAMQNR 194 >UniRef50_C7RH59 Recombination protein RecR n=2 Tax=Anaerococcus RepID=C7RH59_ANAPD Length = 201 Score = 285 bits (730), Expect = 7e-76, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 117/197 (59%), Gaps = 1/197 (0%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 L L+E + LP +G KSA+R+A +++ D +++LT I C C Sbjct: 4 YPESLQNLIEQFQKLPTIGRKSAERLAMAIVESDYKSVDDFSKSLTEVKDRIHACKICGN 63 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 TE EVC+IC + R E +C+VE ++ AIE++ + G+Y VL G +SP DG+GPD Sbjct: 64 LTEDEVCDICKDITRNE-EYLCIVEDVRNLIAIEKSHAYRGKYHVLGGLISPSDGLGPDQ 122 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + +D+L +R+ +E I EVILA + T+EGE T ++ L ++ +++ +++A G+PVG LE Sbjct: 123 LNIDKLLERIEKENIEEVILAISSTIEGETTVLFLTNLLSERNIKITKLAQGIPVGSNLE 182 Query: 183 MVDGTTLSHSLAGRHKI 199 D TL +L R +I Sbjct: 183 YFDQLTLERALEDRREI 199 >UniRef50_Q2RZH8 Recombination protein recR n=1 Tax=Salinibacter ruber DSM 13855 RepID=RECR_SALRD Length = 237 Score = 285 bits (730), Expect = 8e-76, Method: Composition-based stats. Identities = 86/234 (36%), Positives = 123/234 (52%), Gaps = 39/234 (16%) Query: 1 MQT-SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCAD 59 MQ S + L+E LP +G K+A+R+A +L+ + +A ALT ++ C+ Sbjct: 1 MQYTSESVETLVEQFTKLPTIGKKTARRLANYVLKMPQEEVETIANALTSVKEDVQRCST 60 Query: 60 CRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 C +Q+ C IC + +R + ICVVE +D+ AIEQT ++ G Y VL G +SPLDG+G Sbjct: 61 CYVVADQDPCPICGSDKR-DASTICVVEESSDLTAIEQTNEYRGVYHVLGGVISPLDGVG 119 Query: 120 PDDIGLDRLEQRL-------------------------------------AEEKITEVIL 142 PDD+ + L R+ AE + EVIL Sbjct: 120 PDDLRVHELATRIDPSFEDTAADAAPEPNTTPDGEADAEAPPSENGGADEAESGVDEVIL 179 Query: 143 ATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGR 196 A NP VEG+ TA YI++L +DV +RIA G+P+GG+LE D TLS +L GR Sbjct: 180 AVNPNVEGDTTAYYISQLLEPFDVRVTRIARGLPIGGDLEYADEATLSRALEGR 233 >UniRef50_UPI0000E87F50 recombination protein RecR n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87F50 Length = 198 Score = 284 bits (729), Expect = 8e-76, Method: Composition-based stats. Identities = 101/199 (50%), Positives = 144/199 (72%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ + +L L++AL+CLPGVGPKSA R+A+ LLQR+R G L+Q+++ A+ ++GHC C Sbjct: 1 MKDTEVLQSLVDALKCLPGVGPKSALRLAYYLLQRNRKGADTLSQSISNALEQLGHCKLC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 FTEQEVC ICS+ +R + IC+VE P+D+ +EQT + G YFVLMG LSPLDG+GP Sbjct: 61 NDFTEQEVCKICSSQKRDVH-TICIVEMPSDLLMMEQTHSYKGMYFVLMGRLSPLDGVGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 +I LDRL +R+ +I E+ILATN T EG ATA YI EL +++ +RIA G+P+GGE Sbjct: 120 KEIHLDRLIERIKSSEIREIILATNFTAEGNATAQYIKELLKGAEIKMTRIARGLPMGGE 179 Query: 181 LEMVDGTTLSHSLAGRHKI 199 +E +D TL+ ++ R ++ Sbjct: 180 IEYIDSGTLAQAVVERKQL 198 >UniRef50_A5G9K4 Recombination protein recR n=2 Tax=Deltaproteobacteria RepID=RECR_GEOUR Length = 197 Score = 284 bits (728), Expect = 1e-75, Method: Composition-based stats. Identities = 83/199 (41%), Positives = 122/199 (61%), Gaps = 3/199 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 + S LT+L+ L+ LP VG K+A R+AF LL+ + LA++L + C+ C Sbjct: 2 LHISRSLTKLLGELKKLPSVGDKTALRLAFHLLKSPEN-LSALAKSLLEVRDGVRFCSTC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 TE + C++C+ P R + ICVVE P DI A+E++ F GRY VL G LSPL+G+ P Sbjct: 61 FGITESDPCHLCTTP-RDDAS-ICVVEEPQDILAMERSQAFKGRYHVLHGALSPLNGVTP 118 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + + L QRL + EV+LATN TVEGEATA Y+ L ++ +R+AHG+P+G + Sbjct: 119 GQLRIAELLQRLENGSVKEVLLATNFTVEGEATALYLTRLIKPLSIKVTRLAHGIPIGSD 178 Query: 181 LEMVDGTTLSHSLAGRHKI 199 LE VD T+ ++ GR ++ Sbjct: 179 LEYVDAATVQRAVEGRSEL 197 >UniRef50_A1HM03 Recombination protein RecR n=5 Tax=Bacteria RepID=A1HM03_9FIRM Length = 171 Score = 284 bits (727), Expect = 2e-75, Method: Composition-based stats. Identities = 80/172 (46%), Positives = 111/172 (64%), Gaps = 1/172 (0%) Query: 28 MAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQENGQICVVE 87 MA+ +L+ D+ LAQA+ A ++G+C+ C T+ + C +C R + ICVVE Sbjct: 1 MAYHVLEMDKDEAQALAQAILDAKEKVGYCSVCFNLTDCDPCQVCQAEGR-DRTVICVVE 59 Query: 88 SPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPT 147 P D+ A+E+T ++ G Y VL G LSPLDG+GPD + L L QRL + + EVI+ATNP Sbjct: 60 DPRDVEAMERTREYRGLYHVLHGALSPLDGVGPDQLRLAELLQRLRQGDVREVIMATNPN 119 Query: 148 VEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKI 199 VEGEATA YIA L V+ +RIAHG+PVGG+LE D TL+ +L R ++ Sbjct: 120 VEGEATAMYIARLLKPLGVKVTRIAHGLPVGGDLEYADEVTLAKALENRREL 171 >UniRef50_C2CG29 Recombination protein RecR n=4 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2CG29_9FIRM Length = 201 Score = 283 bits (726), Expect = 2e-75, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 119/197 (60%), Gaps = 1/197 (0%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 L L++ + LP +G KSA+R+A +++ RD+ A++L S I C C Sbjct: 4 YPESLVNLIDEFQKLPTIGRKSAERLAMSIVDRDKDSVDEFAKSLLEVKSRIHSCEICGN 63 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 TE+++C+IC + R E +C+VE ++ AIE++ + GRY VL G +SP D IGPD Sbjct: 64 LTEEDICDICKDITRNEEC-LCIVEDVKNLIAIEKSHAYRGRYHVLGGLISPSDDIGPDK 122 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + +D+L +R+ +E I EVILA + T+EGE T+ ++ L + +V+ +++A G+PVG LE Sbjct: 123 LNVDKLLERIDKEDIKEVILAISSTIEGETTSLFLTGLLSNKNVKITKLAQGIPVGSNLE 182 Query: 183 MVDGTTLSHSLAGRHKI 199 D TL +L R +I Sbjct: 183 YFDQLTLERALEDRREI 199 >UniRef50_B4D3F8 Recombination protein RecR n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3F8_9BACT Length = 203 Score = 282 bits (723), Expect = 4e-75, Method: Composition-based stats. Identities = 82/199 (41%), Positives = 120/199 (60%), Gaps = 1/199 (0%) Query: 2 QTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCR 61 + L+ L+ LPG+GP+SA+R+A +LQ + + +++ + I C C Sbjct: 5 AYPAAIQALIGELKRLPGIGPRSAERIALWMLQSRDARPLEVSRVIREVQESIHACPRCG 64 Query: 62 TFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 FT +C IC++ R + QICVVE P DI +E+TG F GRY L G +SPLD +GP+ Sbjct: 65 FFTTDTLCEICADTTR-DAAQICVVEQPTDILPLERTGVFLGRYHALGGRISPLDHVGPE 123 Query: 122 DIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGEL 181 ++ +D L +R+ E +E+ILA VEGEATANY+A L + V +R+A G+P GG L Sbjct: 124 ELRIDALIERIKAEAPSEIILALGSDVEGEATANYLATLLRELPVTVTRLAQGLPAGGGL 183 Query: 182 EMVDGTTLSHSLAGRHKIR 200 E D TLS +LAGR ++ Sbjct: 184 EQADELTLSRALAGRTAVK 202 >UniRef50_Q12B97 Recombination protein recR n=671 Tax=Proteobacteria RepID=RECR_POLSJ Length = 208 Score = 282 bits (723), Expect = 5e-75, Method: Composition-based stats. Identities = 108/209 (51%), Positives = 139/209 (66%), Gaps = 13/209 (6%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M S L L +ALR LPGVG KSA RMAF LLQ D+ G +++A+AL A++ + HC C Sbjct: 1 MADSNALEGLTQALRKLPGVGVKSAARMAFHLLQHDKPGALQIARALEHAVNSVRHCTLC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T TEQEVC C+NP+R + ++CVVE+PAD A+E+T + G YFVLMG LSPLDGIGP Sbjct: 61 NTLTEQEVCATCANPQR-DRSKLCVVETPADQAALERTLAYRGLYFVLMGKLSPLDGIGP 119 Query: 121 DDIGLDRLEQRL------------AEEKITEVILATNPTVEGEATANYIAELCAQYDVEA 168 +DIGL +L R+ A ++ EVILATN T EGEATA+ IA+ V+ Sbjct: 120 NDIGLQKLFDRVVPRDEHGEPLPPASREVQEVILATNFTAEGEATAHVIAQALKSRGVQV 179 Query: 169 SRIAHGVPVGGELEMVDGTTLSHSLAGRH 197 +R+A GVPVG ELE VD T++H+L R Sbjct: 180 TRLARGVPVGSELEYVDLGTIAHALVDRR 208 >UniRef50_D0LUK9 Recombination protein RecR n=3 Tax=Bacteria RepID=D0LUK9_HALO1 Length = 201 Score = 282 bits (722), Expect = 6e-75, Method: Composition-based stats. Identities = 87/200 (43%), Positives = 127/200 (63%), Gaps = 6/200 (3%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 + +L++ L LPG+G K+A R+AF L++ S LAQ L + + C+ C T Sbjct: 3 DPIKRLVQHLARLPGIGEKTATRLAFHLIRSPASQVKDLAQTLVEVIEQTVLCSVCANIT 62 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 + + C IC +P R+ + ICVV +P+D+ AI++ G F GR+ VL G LSPL+GIGP+D+ Sbjct: 63 QDDPCVICRDPGREASA-ICVVSNPSDVVAIDRGGHFRGRFHVLHGVLSPLEGIGPEDLR 121 Query: 125 LDRLEQRLA-----EEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 +D L +RL E +I E+I+AT+ VEGEATA Y+A L ++ SRIA G+PVGG Sbjct: 122 IDELLKRLQTPAAGEPEIDEIIVATSANVEGEATAMYLARLIKPLNIRVSRIASGIPVGG 181 Query: 180 ELEMVDGTTLSHSLAGRHKI 199 ELE D T++ +LAGR + Sbjct: 182 ELEYSDQATIARALAGRSPL 201 >UniRef50_A1BFN2 Recombination protein recR n=17 Tax=Bacteria RepID=RECR_CHLPD Length = 205 Score = 281 bits (721), Expect = 7e-75, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 123/206 (59%), Gaps = 8/206 (3%) Query: 1 MQTSP-LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCAD 59 M+ + + L++ LPG+G K+AQR+ +L R+ +LA+AL + C++ Sbjct: 1 MRYTSGAIETLIDEFARLPGIGRKTAQRLCMHMLNEPRTAAEKLAKALLDVKDRVIRCSE 60 Query: 60 CRTFTE--QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDG 117 C+ T+ + C +C + R + ICVVESP D+ A E+TG + G Y VL G +SPLDG Sbjct: 61 CQNVTDRDSDPCVLCRSSGR-DRTVICVVESPVDLLAFEKTGHYKGLYHVLHGVISPLDG 119 Query: 118 IGPDDIGLDRLEQRLAEEK----ITEVILATNPTVEGEATANYIAELCAQYDVEASRIAH 173 IGPDDI + L R++ + + EV+LA NPTVEGE T+ YI+ L + S+IA Sbjct: 120 IGPDDIKVRELLARVSRPEESLQVREVVLALNPTVEGETTSLYISRLLKPLGIAVSKIAR 179 Query: 174 GVPVGGELEMVDGTTLSHSLAGRHKI 199 G+PVG ELE +D TLS ++ GR + Sbjct: 180 GIPVGAELEFIDEATLSRAMEGRSAM 205 >UniRef50_C8PX50 Recombination protein RecR n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PX50_9GAMM Length = 202 Score = 280 bits (717), Expect = 2e-74, Method: Composition-based stats. Identities = 95/201 (47%), Positives = 134/201 (66%), Gaps = 6/201 (2%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 +P +L++ L+ LPGVGPKSAQRMA LL R G L +AL AM +I C CR Sbjct: 3 TPKFDELVKQLKVLPGVGPKSAQRMALHLLSYKRPQGQALGEALIVAMHDIKQCQVCRGL 62 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 +++++C ICS+PRR E +C+VE+ AD+ AIEQT F+G+YFVL GHLSP+DGIG + + Sbjct: 63 SDEDICPICSDPRRNER-VLCIVETAADMMAIEQTAGFNGKYFVLGGHLSPIDGIGVEQL 121 Query: 124 GLDRLEQRLAEE-----KITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVG 178 G+++L L + + E+ILAT+ TVEG+ TA++I+E Y SRIA G+P+G Sbjct: 122 GINQLIGLLKQHQAAQTPVEEIILATSTTVEGQTTAHFISEAVKPYVTHISRIAQGIPMG 181 Query: 179 GELEMVDGTTLSHSLAGRHKI 199 GELE +D TL +L R ++ Sbjct: 182 GELEYLDSMTLGQALQNRGRL 202 >UniRef50_B1GZS8 Recombination protein recR n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=RECR_UNCTG Length = 198 Score = 279 bits (716), Expect = 3e-74, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 126/199 (63%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M + +++ ++ LPGVG K A+R+++ +L+ + RL ++ A + C+ C Sbjct: 1 MNRPRPVEKMVGIIKKLPGVGHKMAERLSYHILKMPQVEVDRLIDSIQNARRTMKCCSIC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 +E + C ICS+ R++N +CVVE+P D+ A+ + + G YFVL G LSPLD +GP Sbjct: 61 CNLSEHDPCPICSDVTREKN-IVCVVETPQDLIAVSKVEDYKGLYFVLGGALSPLDAVGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 DDI +D+L +RL + I EVI+AT+ +GE TA Y+A++ ++ +R+ +G+PVGG+ Sbjct: 120 DDIRIDKLIKRLKRDSINEVIIATDADSKGEITAVYLADIIKILGIKVTRLGYGLPVGGD 179 Query: 181 LEMVDGTTLSHSLAGRHKI 199 +E D T+S ++AGR ++ Sbjct: 180 IEYADEITISRAIAGRKEM 198 >UniRef50_D1VUH0 Recombination protein RecR n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUH0_9FIRM Length = 201 Score = 279 bits (716), Expect = 3e-74, Method: Composition-based stats. Identities = 72/195 (36%), Positives = 122/195 (62%), Gaps = 2/195 (1%) Query: 6 LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTE 65 + QL+ L LPG+GPK+AQR+A+ ++ D+ LA ++ S++ C+ C ++ Sbjct: 7 PIEQLIRNLTRLPGIGPKTAQRLAYHIIDMDKVEVEELADSIGTIKSKVKKCSLCCNISD 66 Query: 66 QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGL 125 + CNIC + R ++ ICVV+ P D+ A+E+T + G Y VL G +SPL G DI Sbjct: 67 TDPCNICQDNNRDKS-TICVVQYPKDVDAMERTHTYKGLYHVLNGFISPLKGRTESDINF 125 Query: 126 DRLEQRLA-EEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 L +R+ ++I E+I+A++PTV+G+ TA+++ E +D++ +RI +G+PVGG+LE Sbjct: 126 VELIKRVENNKEIKEIIIASSPTVDGDITASFLVEALKAFDLKVTRIGYGLPVGGDLEYY 185 Query: 185 DGTTLSHSLAGRHKI 199 D T+S +L R ++ Sbjct: 186 DEITISAALKNRREL 200 >UniRef50_Q115W2 DNA replication and repair protein RecR n=5 Tax=Bacteria RepID=Q115W2_TRIEI Length = 182 Score = 278 bits (712), Expect = 8e-74, Method: Composition-based stats. Identities = 77/183 (42%), Positives = 121/183 (66%), Gaps = 2/183 (1%) Query: 17 LPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEVCNICSNPR 76 +PGVGPK+AQR+A +++R + LA+AL A +IG C C + + +C IC NP+ Sbjct: 1 MPGVGPKTAQRLALYIIKRPEAEIQALAEALVDARKKIGLCQKCFHLSAEPICEICRNPQ 60 Query: 77 RQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEK 136 R + ICVV D+ A+E+T ++ G+Y VL G +SP+DGIGP+ + + L +R+++E Sbjct: 61 RDK-EVICVVCDSRDLIALEKTREYKGQYHVLGGVISPMDGIGPEQLSIQPLVRRVSQEN 119 Query: 137 ITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGR 196 I EVI+A +P+VEGE T Y+ +L + + +RIA G+P+GG+LE D TL+ +L GR Sbjct: 120 IQEVIIAISPSVEGETTTLYVGQLLRPF-TKVTRIAFGLPMGGDLEYADELTLARALEGR 178 Query: 197 HKI 199 ++ Sbjct: 179 QEL 181 >UniRef50_C7M1M5 Recombination protein RecR n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M1M5_ACIFD Length = 205 Score = 278 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 92/196 (46%), Positives = 118/196 (60%), Gaps = 2/196 (1%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 P L L+E L LPG+GPKSAQR+A L+ R + RLA L A +G C C Sbjct: 5 PPTLDALIEELGRLPGIGPKSAQRIALALIVRGPAAAHRLADVLVTATERLGRCDRCGAL 64 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 E C IC +P R + VVE D++A E+ +F G Y VL G +SP+DG+GPDD+ Sbjct: 65 AEGARCPICDDPARDPRIVL-VVEGDRDVWAFERARRFRGTYHVLGGVISPMDGVGPDDL 123 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 + RL R+ E I EV++AT+PTVEGE TA Y+A + A V SR+A GVPVGGELE Sbjct: 124 AIGRLIARVEAEPIEEVVVATSPTVEGETTATYLARVLAGR-VGVSRLATGVPVGGELEY 182 Query: 184 VDGTTLSHSLAGRHKI 199 VD TL+ +L GR Sbjct: 183 VDELTLARALEGRRPF 198 >UniRef50_Q5ZRX0 Recombination protein recR n=10 Tax=Gammaproteobacteria RepID=RECR_LEGPH Length = 199 Score = 277 bits (710), Expect = 1e-73, Method: Composition-based stats. Identities = 108/198 (54%), Positives = 140/198 (70%), Gaps = 1/198 (0%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 T L++L+EALRCLPGVGPKSAQRM F LLQ R G+ LA L +AM I HC C Sbjct: 2 TMDALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCNN 61 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 +TEQ +C +C NP R ++ +CVVESPAD+ AIEQ+ F G+YFVLMG +SPLDG+GPDD Sbjct: 62 YTEQTLCALCQNPNR-DSTLLCVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDD 120 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 IGL +L++ + EKI EVILA +P+VE + T ++I +L V S++AHG+P GGELE Sbjct: 121 IGLPKLKELITREKIQEVILALSPSVESQTTIHFIHQLLKDETVNISQLAHGIPSGGELE 180 Query: 183 MVDGTTLSHSLAGRHKIR 200 +DG T+S +L R I Sbjct: 181 FLDGNTISSALKNRAVIN 198 >UniRef50_Q6MAF1 Recombination protein recR n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=RECR_PARUW Length = 198 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 121/199 (60%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ L +L+ L+ PGVG KSA+R AF LL + L++ + +I C +C Sbjct: 1 MRYPEHLLKLIHILKKFPGVGHKSAERFAFHLLNWPMEHLIELSETVKNTKDKIKQCLNC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T++ C C +R ++ ICV P D+++IE+T ++ G Y VL G LSPL+ GP Sbjct: 61 GCLTDEAACYFCDINQR-DSQIICVTAFPRDVFSIEETHEYRGLYHVLGGVLSPLENRGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + + + RL+ R+ + +I EV++A + T+EG+ATA ++ + A D++ SR+A G+P+G Sbjct: 120 EHLSISRLKHRIQDLQIKEVVIALDSTLEGDATALFLKQELAADDIQISRLAFGLPMGSS 179 Query: 181 LEMVDGTTLSHSLAGRHKI 199 L+ VDG TL+ +LAGR + Sbjct: 180 LDYVDGGTLARALAGRSRF 198 >UniRef50_Q04NX9 Recombination protein recR n=6 Tax=Leptospira RepID=RECR_LEPBJ Length = 197 Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats. Identities = 82/194 (42%), Positives = 127/194 (65%), Gaps = 1/194 (0%) Query: 6 LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTE 65 LL ++++AL LPG+G KSA R++F LL+ ++ LT ++I C C ++ E Sbjct: 5 LLEEMVDALSSLPGIGRKSAFRISFHLLRLEQGHFNHFIHQLTNTKNKIKFCKRCGSYAE 64 Query: 66 QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGL 125 E+CNIC++ +R + CVVE P DI+ IE T +F G+Y VL G +SPL+GIGP D+ + Sbjct: 65 TEICNICTSEKR-DTHTFCVVEQPEDIFFIENTREFHGKYHVLNGVISPLEGIGPKDLRI 123 Query: 126 DRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVD 185 L +R+ E+I EV++ATNPT+EG+ATA+Y+A V+ +RIA+G+ VGG +E+ D Sbjct: 124 KELLERIEPEQIKEVLVATNPTLEGDATADYLASQLKPLSVDVTRIAYGITVGGSIELAD 183 Query: 186 GTTLSHSLAGRHKI 199 TL ++ R ++ Sbjct: 184 QYTLGRAIRSRLQL 197 >UniRef50_Q7UQ68 Recombination protein recR n=3 Tax=Planctomycetaceae RepID=RECR_RHOBA Length = 199 Score = 275 bits (705), Expect = 6e-73, Method: Composition-based stats. Identities = 75/194 (38%), Positives = 128/194 (65%), Gaps = 1/194 (0%) Query: 6 LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTE 65 ++ L++ L LPG+G KSA+R+AF LL+ + LA A+ R +++ +C+ C +E Sbjct: 7 AVSDLVDQLSKLPGIGRKSAERLAFHLLRVHEDEALALASAIRRVRTDVRYCSVCYNLSE 66 Query: 66 QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGL 125 E+C ICS+P+R + ++CVVE P D+ +++ +G +SG Y VL+G ++PLDGI PD + + Sbjct: 67 TELCRICSDPKR-DATRLCVVEQPRDLLSLDASGVYSGLYHVLLGRIAPLDGITPDQLTI 125 Query: 126 DRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVD 185 D L +R+ +E+I+ATNPTVEG+ T+ Y++ L ++ VE +R+A G+ G LE + Sbjct: 126 DSLVERVRTGNFSEIIMATNPTVEGDGTSLYLSNLMQEFPVEITRLARGITSGSVLEYAN 185 Query: 186 GTTLSHSLAGRHKI 199 ++ +L GR ++ Sbjct: 186 REIIADALTGRQRL 199 >UniRef50_A4QAN3 Recombination protein recR n=14 Tax=Corynebacterineae RepID=RECR_CORGB Length = 218 Score = 275 bits (704), Expect = 6e-73, Method: Composition-based stats. Identities = 97/218 (44%), Positives = 126/218 (57%), Gaps = 22/218 (10%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 L L++ L LPGVGPKSAQR+AF LL D + RL +AL + C C Sbjct: 2 FEGPLQDLIDELSRLPGVGPKSAQRIAFHLLNVDPTDITRLQEALGGVRDGVQFCRICCN 61 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 + +EVC ICS+ R + G ICVVE P DI IE+TG+FSGRY VL G L PL IGP + Sbjct: 62 ISREEVCRICSDSGR-DGGTICVVEEPKDIQVIERTGEFSGRYHVLGGALDPLANIGPRE 120 Query: 123 IGLDRLEQRL--------------------AEEKITEVILATNPTVEGEATANYIAELCA 162 + + L QR+ A + EVILAT+P EGEATA+Y+ L Sbjct: 121 LNISTLLQRIGGVLPDRELADSTPENKLFDATPTVREVILATDPNTEGEATASYLGRLLK 180 Query: 163 QY-DVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKI 199 + D+ SR+A G+P+GG+LE VD TLS +L+GR +I Sbjct: 181 DFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLQI 218 >UniRef50_A3ZPF3 Recombinant protein RecR n=3 Tax=Planctomycetaceae RepID=A3ZPF3_9PLAN Length = 199 Score = 275 bits (704), Expect = 7e-73, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 125/199 (62%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 +QT+ +T+L++ LPG+G KSA+R+A+ +L+ S + LA ++ + +C+ C Sbjct: 2 VQTTDSVTRLVDEFAKLPGIGRKSAERLAYHILRVHESEALALADSIRTVKQNVRYCSQC 61 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 E E+C +C + RR + +C+VE P D+ A+EQ+G F G Y VL+G ++PL+GIGP Sbjct: 62 FNLAESELCTVCQDTRRDQT-LLCIVEQPRDLMALEQSGMFPGLYHVLLGRIAPLEGIGP 120 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 D + +D L R+ K E+I+ATNPT EG+ TA +I+ L A+ V +R+A G+ G Sbjct: 121 DQLTIDALVDRVRAGKFREIIMATNPTTEGDGTALHISNLLAELPVTLTRLARGITSGSV 180 Query: 181 LEMVDGTTLSHSLAGRHKI 199 LE + L+ +L+GR K+ Sbjct: 181 LEFTNKEILADALSGRQKL 199 >UniRef50_A6LBX7 Recombination protein recR n=84 Tax=cellular organisms RepID=RECR_PARD8 Length = 208 Score = 275 bits (704), Expect = 8e-73, Method: Composition-based stats. Identities = 83/198 (41%), Positives = 118/198 (59%), Gaps = 1/198 (0%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 S LL + L LPGVG K+A R+A +L+RD A AL ++ +C C Sbjct: 7 SALLENAVNELASLPGVGRKTALRLALYMLRRDVGYTENFAAALVALRRDVKYCKVCHNI 66 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 + EVC+IC+NP R ++ +CVVE+ ++ AIE TGQF G Y VL G +SP+DGIGP D+ Sbjct: 67 CDDEVCSICANPSR-DHSLVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGIGPGDL 125 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 +D L +R+AE ++ E+ILA + T+EG+ T +I + YDV S IA GV +G E+E Sbjct: 126 RIDSLVRRVAEGEVKEIILALSTTMEGDTTNFFIYRKLSGYDVRISVIARGVSIGDEIEY 185 Query: 184 VDGTTLSHSLAGRHKIRF 201 D TL S+ R + Sbjct: 186 ADEITLGRSIINRTEFNL 203 >UniRef50_D1R5I7 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5I7_9CHLA Length = 200 Score = 274 bits (702), Expect = 1e-72, Method: Composition-based stats. Identities = 77/197 (39%), Positives = 118/197 (59%), Gaps = 1/197 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ L +L++ L+ LPGVG +SA+R AF L++ D L++ +I C+ C Sbjct: 1 MRYPSHLIKLIQVLKKLPGVGARSAERFAFQLMEWDEEKLREFGTILSQVPEKIQACSAC 60 Query: 61 RTFTEQ-EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 E+ C C + RQ + +CV+ SP D+++IE+T ++ G Y VL G LSPLDG G Sbjct: 61 GCLKEEAGGCPFCDDLVRQASQILCVISSPRDVFSIEETREYKGLYHVLGGLLSPLDGFG 120 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 P+ + L L+ R+ +I EV++A T+EG+ATA YI V+ SR+A+G+PVG Sbjct: 121 PERLSLASLKGRIEIHQIHEVVIALGSTLEGDATALYIKRELGTLPVQVSRLAYGLPVGS 180 Query: 180 ELEMVDGTTLSHSLAGR 196 L+ VDG TL+ + +GR Sbjct: 181 SLDYVDGGTLARAFSGR 197 >UniRef50_B2KES1 Recombination protein RecR n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KES1_ELUMP Length = 197 Score = 274 bits (702), Expect = 1e-72, Method: Composition-based stats. Identities = 84/196 (42%), Positives = 119/196 (60%), Gaps = 3/196 (1%) Query: 6 LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTE 65 +L+ ALR LPGVGP+ A+R + L+ S AL+ I C+ C ++E Sbjct: 3 SFDRLVRALRRLPGVGPRQAERFSAYFLKTSDSEIDEFINALSALRENIHLCSICFAYSE 62 Query: 66 QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGL 125 VC+IC + R+ ICVVE P DI AIE+TG F G Y VL G LSP+DG G ++I + Sbjct: 63 DGVCDICEDSSRE-RDIICVVEDPQDIEAIEKTGAFKGLYHVLHGALSPIDGRGVENIKI 121 Query: 126 DRLEQRL--AEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 L +R+ ++ + EVI+AT+P EGE TA YIA+ + SRI +GVP+GG+L+ Sbjct: 122 RELIERIHNSQTPVREVIIATDPDTEGETTALYIADALRGLVDKVSRIGYGVPLGGDLDY 181 Query: 184 VDGTTLSHSLAGRHKI 199 +D TL++SL GR K+ Sbjct: 182 LDEMTLTYSLKGRTKL 197 >UniRef50_Q1Q3A9 Strongly similar to recombination protein RecR n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3A9_9BACT Length = 215 Score = 274 bits (701), Expect = 1e-72, Method: Composition-based stats. Identities = 74/198 (37%), Positives = 120/198 (60%), Gaps = 1/198 (0%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 + L+ +PG+G K+A+R+A +L++ M+LA A+ + C C Sbjct: 18 YPQTVNNLISEFGKMPGIGQKTAERLACYVLKQPVDDAMKLAYAIRDVKKYMKICTVCFN 77 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 +E C+ICSN RR ++ ICVVE AD+ IE+TG+++G Y +L GH+SPL+GI PD Sbjct: 78 VSENSPCHICSNLRR-DSSIICVVEQFADLLTIEKTGKYNGHYHILQGHISPLEGIDPDL 136 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + + RL QR+ + + EVILATN +EG+ TA YI + + V+ +RIA G+P G LE Sbjct: 137 LTIGRLLQRVKDGSVKEVILATNLNMEGDITAVYIHKQLQSFGVKVTRIARGLPTGSYLE 196 Query: 183 MVDGTTLSHSLAGRHKIR 200 + ++ +++ R+++R Sbjct: 197 YANTAIVADAVSDRNEMR 214 >UniRef50_A9HZ10 Recombination protein recR n=9 Tax=Burkholderiales RepID=RECR_BORPD Length = 202 Score = 274 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 89/194 (45%), Positives = 128/194 (65%), Gaps = 1/194 (0%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 L L+EALR LPGVG +SA+RMA+ L+Q D G L +AL A+ + HCA C +F Sbjct: 8 PEPLVSLIEALRRLPGVGVRSARRMAYHLMQHDLQGADMLGRALAGAVQNLRHCARCNSF 67 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 TE ++C C+NP+R + +CVVE+PAD IE + + G Y+VLMG ++PL+GIGP ++ Sbjct: 68 TEDDICATCANPKRDPS-VLCVVETPADQNMIEASHGYRGLYYVLMGRVAPLEGIGPREL 126 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 RL +R ++ + EVILATN T EGE TA+++ E+ A ++ +R+A GVP G ELE Sbjct: 127 DFQRLLERASDGVVREVILATNFTAEGETTAHFLGEVLAGKGLKVTRLARGVPAGSELEY 186 Query: 184 VDGTTLSHSLAGRH 197 VD T++ +L R Sbjct: 187 VDAGTIAWALMERK 200 >UniRef50_Q4JSL5 Recombination protein recR n=8 Tax=Corynebacterium RepID=RECR_CORJK Length = 250 Score = 273 bits (699), Expect = 3e-72, Method: Composition-based stats. Identities = 83/250 (33%), Positives = 120/250 (48%), Gaps = 54/250 (21%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 L +++ LPG+GPKSAQR+A LL + R AL R + C C Sbjct: 2 FEGPLQDVIDEFSRLPGIGPKSAQRIALHLLNEEPEDIERFQSALGRLQRGVTFCRICHN 61 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 ++++VC IC++ R ++ ICVVE DI IE+T ++ GRY VL G L PL+GIGP + Sbjct: 62 ISQEDVCRICADSNRDKS-IICVVEESKDIQVIERTAEYRGRYHVLGGALDPLNGIGPKE 120 Query: 123 IGLDRLEQRL-------------------------------------------------- 132 + + L QR+ Sbjct: 121 LNVTPLVQRIGGALPDVALGAKGGGASLGDADTPADGESSGADAAETGNAKTAAVETDVE 180 Query: 133 --AEEKITEVILATNPTVEGEATANYIAELCAQY-DVEASRIAHGVPVGGELEMVDGTTL 189 +ITEVI+AT+P EGEATA+Y+ L + + +R+A G+P+GG+LE VD TL Sbjct: 181 YDEAPEITEVIIATDPNTEGEATASYLGRLLRDFPGLTVTRLASGIPMGGDLEFVDELTL 240 Query: 190 SHSLAGRHKI 199 S + AGR + Sbjct: 241 SRAFAGRTAL 250 >UniRef50_C7N9F2 Recombination protein RecR n=6 Tax=Fusobacteriaceae RepID=C7N9F2_LEPBD Length = 198 Score = 272 bits (697), Expect = 4e-72, Method: Composition-based stats. Identities = 72/193 (37%), Positives = 117/193 (60%), Gaps = 2/193 (1%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L L++ LPG+G KSA R+AF +L++ + R+ + + + + I HC C +E Sbjct: 4 LDDLIDVFAKLPGIGRKSAARIAFDVLEKSEADIDRMLEIIKDSHTNIKHCEICGNLSEN 63 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 ++C IC+N +R + ICVVE D+ A E++ ++G Y VL G + PL+G+ +D+ L Sbjct: 64 DICEICANEKRDK-EVICVVEGVRDVIAFEKSETYNGLYHVLGGKIDPLNGVTIEDLNLM 122 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 +L +RL + + E+ILA NP +EGE T+ Y+ + +V+ S+IA G+P+GG +E D Sbjct: 123 KLMRRL-DGNVKEIILALNPDLEGETTSLYLTKFLKDKNVKISKIASGIPMGGNIEYTDM 181 Query: 187 TTLSHSLAGRHKI 199 TL SL GR + Sbjct: 182 ATLGRSLEGRVNV 194 >UniRef50_O83969 Recombination protein recR n=3 Tax=Treponema RepID=RECR_TREPA Length = 201 Score = 272 bits (696), Expect = 6e-72, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 121/196 (61%), Gaps = 1/196 (0%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 P + +++E L LPG+G K A R+A+ LL+RD + LA+ + + C C F Sbjct: 2 IPAIEEVVEHLSRLPGIGVKLATRLAYHLLKRDPAEAQVLARGIACLHERVYRCVCCGAF 61 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 E C +C++ R + G ICVVE D+ + G++ G + VL G ++PL+G+GPD + Sbjct: 62 CEGRTCALCTDASR-DRGIICVVERAQDVEMMAGVGEYRGLFHVLGGVIAPLEGVGPDQL 120 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 + L +RL E + EVILA NPTVEG+ TA Y+ ++ A + V +R+A G+PVGG+LE Sbjct: 121 RIAALLKRLQESSVREVILALNPTVEGDTTALYVQKILANFPVIVTRLASGIPVGGDLEY 180 Query: 184 VDGTTLSHSLAGRHKI 199 +D TTL+HSL GR + Sbjct: 181 IDRTTLAHSLRGRRPL 196 >UniRef50_B0VGB5 Recombination protein RecR n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VGB5_9BACT Length = 199 Score = 271 bits (695), Expect = 8e-72, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 119/200 (59%), Gaps = 1/200 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M S L +L+++ PG+G K+AQR+A+ L+ +D++ + LA+ + + C+ C Sbjct: 1 MLFSENLEKLIQSFNRFPGIGRKTAQRLAWYLVAQDKNFALNLAETIKTTVESFKTCSQC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 +E + C C +P R ++ +CVVE+ +DI +E +F GRYFVL LSPLDG GP Sbjct: 61 NMLSESDPCPFCISPDRSDS-YLCVVENSSDIQILEGMNEFKGRYFVLGHLLSPLDGYGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + I L +R+ +EVILA P+ EGEAT +Y+ EL + +R++ G+P GG+ Sbjct: 120 EQINTAMLLERIENLHPSEVILALKPSAEGEATIHYLWELLKDKGISITRLSTGIPFGGD 179 Query: 181 LEMVDGTTLSHSLAGRHKIR 200 LE + TL+++ R+ ++ Sbjct: 180 LEYSNLNTLANAWKRRYTVQ 199 >UniRef50_D1B5E4 Recombination protein RecR n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5E4_THEAS Length = 200 Score = 271 bits (693), Expect = 1e-71, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 108/196 (55%), Gaps = 1/196 (0%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 P + L+E L+ LPGVG K A+R AF +L + + L++A+ A + C+ C Sbjct: 6 IPSVDGLIEKLKRLPGVGEKGARRFAFFILGQPKDWVEDLSRAIREARWSVRPCSVCGGL 65 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 E ++C ICS+P R + ICVVES D A+E+ F+GRY VL G SPLDG Sbjct: 66 AEGDLCPICSDPAR-DREVICVVESQEDCVAMERHRIFNGRYHVLGGRYSPLDGEDIPSE 124 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 L L R+ + EVILA P+VEGE TA + E V+ SR++ G+PVGG + Sbjct: 125 ALASLRDRVERGGVQEVILALAPSVEGELTALAVKEALDDLPVKVSRLSSGLPVGGSIGF 184 Query: 184 VDGTTLSHSLAGRHKI 199 D TL +L GR + Sbjct: 185 ADSATLKLALEGRRGM 200 >UniRef50_C0QUF6 Recombination protein RecR n=4 Tax=Aquificales RepID=C0QUF6_PERMH Length = 202 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 86/196 (43%), Positives = 124/196 (63%), Gaps = 1/196 (0%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 L + +E + LPG G KSA+R A LL R +++ + L + +I C++C + Sbjct: 8 PSTLKEAVEKISELPGYGEKSAKRFAVNLLDMPRGEAIQIIKTLFDMLEKIHPCSECGLY 67 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 TE+E+C+ICS+ R + ICVVE D +AIE+TG+F G Y V+ G LSPL+GI +D+ Sbjct: 68 TEEEICSICSSEER-DRSVICVVEETFDAFAIEKTGKFKGVYHVIGGRLSPLEGITAEDL 126 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 +++L +R+ + + E+ILATNPTVEGEATA+YI L DV SRIA+G+P G LE Sbjct: 127 NIEKLVERVDKNGVKEIILATNPTVEGEATASYIHNLLKDRDVIISRIAYGLPFGAVLEN 186 Query: 184 VDGTTLSHSLAGRHKI 199 D TLS +L + I Sbjct: 187 ADDFTLSKALEHKTII 202 >UniRef50_Q0B0W3 Recombination protein recR n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RECR_SYNWW Length = 197 Score = 269 bits (689), Expect = 4e-71, Method: Composition-based stats. Identities = 76/199 (38%), Positives = 123/199 (61%), Gaps = 2/199 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ + L L++ L LPG+GPK+AQR+A +L+ +LAQA+ ++ C+ C Sbjct: 1 MRLARPLENLIDQLLKLPGIGPKTAQRLALYILKLPEMEARQLAQAIVDCRQKVFPCSRC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T+ + C ICS+ R ++ IC+ E +D+ AIE+TG F G+YFVL + ++ G Sbjct: 61 GYLTDFDPCLICSDESRDKS-LICIGEESSDVIAIERTG-FRGQYFVLNKDFNLMEDKGL 118 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 +D+ L LE RLA +I EV+LA NP ++GE + ++A + + V+ +R+AHG+PVGG+ Sbjct: 119 EDLNLKPLEDRLATGEIKEVVLALNPDMDGEVMSRFLATVAGSFGVKVTRLAHGLPVGGD 178 Query: 181 LEMVDGTTLSHSLAGRHKI 199 +E D TL +L GR ++ Sbjct: 179 IEFADEITLRRALEGRKEL 197 >UniRef50_D2MMY3 Recombination protein RecR n=1 Tax=Bulleidia extructa W1219 RepID=D2MMY3_9FIRM Length = 200 Score = 269 bits (688), Expect = 5e-71, Method: Composition-based stats. Identities = 79/202 (39%), Positives = 124/202 (61%), Gaps = 5/202 (2%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ L L+E +R LPGVG K+A+R AF L + ++ + A A+ +++ +C C Sbjct: 1 MKYPDSLNHLIEMIRQLPGVGEKTAERYAFALYEMEKEEAIEFAHAIVNMKNKVKNCLIC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 +E+E C ICS+ +R ++ +I VV+SP DI AIE G++ G Y VL G +S GI P Sbjct: 61 GNMSEEEQCAICSSSKR-DHTKILVVQSPKDIIAIENMGEYDGVYHVLNGLISATKGILP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQY--DVEASRIAHGVPVG 178 +++ + L QR E EVILAT+ T++GE T+ Y+ ++ Q ++ +RIAHG+P G Sbjct: 120 ENLKIKELIQRAKE--AREVILATSATLDGETTSLYLTKVLDQEYPNLLVTRIAHGLPSG 177 Query: 179 GELEMVDGTTLSHSLAGRHKIR 200 L+ D TLSH+L+ R K++ Sbjct: 178 AMLDYADEMTLSHALSERRKVK 199 >UniRef50_A6DLE7 Recombination protein RecR n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DLE7_9BACT Length = 200 Score = 269 bits (688), Expect = 6e-71, Method: Composition-based stats. Identities = 77/201 (38%), Positives = 123/201 (61%), Gaps = 3/201 (1%) Query: 1 MQ-TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCAD 59 M+ Q +E + LPG+G K A+++A L S A + ++ +CA Sbjct: 1 MKLYPEQFQQAIETIASLPGIGKKGAEKLALALYSWPESKLKHFASLIDSMQHDLHNCAQ 60 Query: 60 CRTFTEQE-VCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGI 118 C F++++ +C ICS+P+R N QICVVE + + IE++G F G Y VL G LSP+ GI Sbjct: 61 CGFFSQKDALCPICSDPKRL-NHQICVVEQVSQLPVIEKSGSFKGLYHVLHGKLSPMSGI 119 Query: 119 GPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVG 178 GPDDI +D L QR E ++EVILAT+ +EG+ATA++IA+L ++ + +RIA G+P+G Sbjct: 120 GPDDINIDSLLQRCKENHVSEVILATSTDIEGQATASFIAKLLNEHGINTTRIAQGIPIG 179 Query: 179 GELEMVDGTTLSHSLAGRHKI 199 +L D +++ ++ R ++ Sbjct: 180 ADLNYADAASIAMAINSRREL 200 >UniRef50_C9RQ73 Recombination protein RecR n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQ73_FIBSS Length = 198 Score = 268 bits (686), Expect = 8e-71, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 113/196 (57%), Gaps = 2/196 (1%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 L L+ LPG+G K+A+R+A+ +L R + R A +L +A ++ C C F Sbjct: 5 PQSLENLISEFASLPGIGLKTARRLAYHMLSRKKGDVERFADSLMQAAEKVHPCPRCHAF 64 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 T++++C C R+ ICVVE +DI E++ G YFVL G +SPLDGIGP+ + Sbjct: 65 TDEDICPTCR--AREGAKSICVVEKNSDILPFERSSVHKGLYFVLGGVISPLDGIGPEAL 122 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 L +L +R+ E I E++LA + E ++TA I + A +V+ +R+A G+P+G +LE Sbjct: 123 HLPQLVERIKAENIEELVLALGSSPEADSTALMIDRMLAGVNVKRTRLARGIPMGSDLEF 182 Query: 184 VDGTTLSHSLAGRHKI 199 +D T+ + GR + Sbjct: 183 IDEVTMLRAFEGRVSL 198 >UniRef50_A9NE31 Recombination DNA repair protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NE31_ACHLI Length = 195 Score = 268 bits (686), Expect = 9e-71, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 106/196 (54%), Gaps = 3/196 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 ++ +L++ L+ LPG+G K+A+R+A L D L + I C C Sbjct: 2 YPTIILELIDDLKKLPGIGEKTAERLALHLTNWDSEDLKHFGTHLIELKTNISFCDICGL 61 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 T+ +C+IC + + + QI VV D++AIE+T F G Y VL G + GI P D Sbjct: 62 LTDDHICSICKDETKDKT-QIMVVSDSKDVFAIEKTKTFHGNYHVLNGLIDFSKGIEPKD 120 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + D+L R+ + I E+I+ATN VEGE TA YI L D+ SR+ +G+PVG +L+ Sbjct: 121 LNFDKLTNRVKD--IKEIIIATNSNVEGELTAQYIKSLYKDLDLTISRLGYGLPVGADLK 178 Query: 183 MVDGTTLSHSLAGRHK 198 D TL+ ++ R K Sbjct: 179 YADQLTLTKAVENRQK 194 >UniRef50_C6HVG6 Recombination protein RecR n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVG6_9BACT Length = 215 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 84/205 (40%), Positives = 116/205 (56%), Gaps = 9/205 (4%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 L++ R LPG+G K+A R+AF LLQ S LA A++ + C++CR Sbjct: 12 FPAPFQDLVDLFRRLPGIGTKTATRLAFHLLQSSESERQELASAVSTLKERLLPCSECRN 71 Query: 63 FTEQEV--------CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSP 114 C IC +P R ++ + VVE +Y+IE++G+F GRY VL G LSP Sbjct: 72 IVASPPPESPEVPRCAICLDPAR-DSTILIVVEDIQTLYSIEKSGEFRGRYHVLEGRLSP 130 Query: 115 LDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHG 174 L+GI P+ + + L QRL I EV+LAT+PT +GEATA Y++ L + SRIA G Sbjct: 131 LEGIAPEMLRVRELLQRLENPDIREVVLATSPTTDGEATALYLSRLVKPLGIRVSRIAFG 190 Query: 175 VPVGGELEMVDGTTLSHSLAGRHKI 199 +PVG ELE VD TL ++ GRH Sbjct: 191 IPVGLELEYVDEVTLIRAVEGRHPF 215 >UniRef50_B0S0K8 Recombination protein recR n=2 Tax=Finegoldia magna RepID=RECR_FINM2 Length = 202 Score = 267 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 74/200 (37%), Positives = 123/200 (61%), Gaps = 3/200 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 + +L++ L LP +G KSA+R+A+ ++ D L +++ + I CA+C Sbjct: 4 YPKAMDELIKNLSNLPTIGRKSARRLAYRIIDMDPKKVDELVESIVNVKTNIRPCANCGN 63 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 T++++C+ICS+ +R +N I VVE ++ +IE+TG+++G+Y VL G LSP D I P D Sbjct: 64 LTDKKLCDICSDQKR-DNSVITVVEDSMNVISIEKTGEYNGKYHVLGGLLSPRDNIAPQD 122 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCA--QYDVEASRIAHGVPVGGE 180 + L+ L R ++ + EVILA +PT G+ T N+I E+ +Y+V+ SRIA GVP+G Sbjct: 123 LNLENLFLRCKKDYVKEVILALSPTTNGDLTTNFIIEVLKNEEYNVKVSRIAMGVPLGAN 182 Query: 181 LEMVDGTTLSHSLAGRHKIR 200 LE D +L ++ R +I+ Sbjct: 183 LEYYDEMSLYKAILDRREIK 202 >UniRef50_B3DWR4 Recombinational DNA repair protein RecR n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DWR4_METI4 Length = 199 Score = 266 bits (680), Expect = 4e-70, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 118/197 (59%), Gaps = 1/197 (0%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 P + L+ +L+ LPG+GP+SA+R+ LL+ + +LAQ++ ++I C+ C Sbjct: 4 FPPAIQNLIHSLKELPGIGPRSAERITLYLLEETKGTKQKLAQSINEIGAKIKPCSRCGF 63 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 +TE+ +C+IC + R + C+V P D+ IE+TG F G Y VL +SPL+G P+D Sbjct: 64 YTEETLCSICLDHSRDKQC-FCLVIHPIDVIKIERTGAFRGVYHVLGKKISPLEGHVPED 122 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + L L QR+ EEK E+ILA E EATA YI ++ + + S +A G+P G LE Sbjct: 123 LPLSPLLQRIDEEKPREIILAFGTDAEAEATALYIGQILKKRAIRVSSLAMGLPAGSGLE 182 Query: 183 MVDGTTLSHSLAGRHKI 199 D TLS++L+GR ++ Sbjct: 183 YADSVTLSYALSGRREL 199 >UniRef50_A5EY33 Recombination protein recR n=2 Tax=Gammaproteobacteria RepID=RECR_DICNV Length = 201 Score = 265 bits (679), Expect = 6e-70, Method: Composition-based stats. Identities = 97/196 (49%), Positives = 138/196 (70%), Gaps = 1/196 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M SP L++AL CL GVG K+AQRMA LL + + LA+ALT A++ + C C Sbjct: 1 MSFSPSFDALVQALTCLSGVGKKTAQRMALDLLLKKNAEAATLAKALTTALATVQRCRYC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 R ++ EVC +C++P R QICVVE+PAD+ AIEQ + G +FVLMGH++PLDG+GP Sbjct: 61 RNLSDAEVCLLCADPLRN-RQQICVVETPADVIAIEQATDYRGLFFVLMGHIAPLDGMGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + +G+D L+ RLA E I+E++LATN T+EGE TA ++AEL A++ ++A+R+A+GVP+G E Sbjct: 120 EALGMDILDDRLANEAISELVLATNATLEGETTAYFLAELAAKHGIQATRLAYGVPLGSE 179 Query: 181 LEMVDGTTLSHSLAGR 196 L +D TL H+ R Sbjct: 180 LSYIDKQTLHHAFQSR 195 >UniRef50_C8P1Z7 Recombination protein RecR n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1Z7_ERYRH Length = 196 Score = 265 bits (678), Expect = 7e-70, Method: Composition-based stats. Identities = 74/198 (37%), Positives = 116/198 (58%), Gaps = 3/198 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 L QL+E+ LPGVG K+A+R A ++L + + +Q LT A +EI C C Sbjct: 2 YPKKLEQLIESFMMLPGVGQKTAERYALSILDQQTQDVDKFSQDLTIARNEIQSCKVCHN 61 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 +++E+C IC + R + ICVV + + ++IE+ ++ G Y VL G +S GI P++ Sbjct: 62 LSDEEICQICKDNTR-DRSIICVVATAKEAFSIEKMNEYHGVYHVLGGLISTQKGILPEN 120 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + + L R+ +E +TEVILA N TVEGE T+ Y+A+ + SR+A G+P+GG L+ Sbjct: 121 LNILSLINRV-DENVTEVILALNATVEGEMTSLYLAKKLEDK-TDVSRLAFGLPIGGHLD 178 Query: 183 MVDGTTLSHSLAGRHKIR 200 D TL + GR K++ Sbjct: 179 YADDMTLMKAFEGRSKVK 196 >UniRef50_B2UKM6 Recombination protein RecR n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKM6_AKKM8 Length = 202 Score = 264 bits (676), Expect = 1e-69, Method: Composition-based stats. Identities = 74/198 (37%), Positives = 108/198 (54%), Gaps = 2/198 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 + +L+ AL+ LPG+G + A+RMA +LQ +A+ + +A + C C Sbjct: 6 YPIPVLELVTALKQLPGIGTRGAERMALWMLQGHMGEAEAIARTIGQAAEHVTPCPVCGF 65 Query: 63 F-TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 F TE E C C + R ++ ICVVE D+ IE++ + G Y L G LSPLD + P+ Sbjct: 66 FSTEGEPCAACRDEER-DSRLICVVEQATDVIPIERSSAYRGLYHCLGGKLSPLDDVEPE 124 Query: 122 DIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGEL 181 D+ + L +R++ + EVILAT VEGEATA Y+ L + D SR A G+P G L Sbjct: 125 DLNIQSLVERVSRQPDCEVILATGSDVEGEATATYLHHLLKEMDCRISRPAQGLPAGSGL 184 Query: 182 EMVDGTTLSHSLAGRHKI 199 D TL +L GR ++ Sbjct: 185 SHADTLTLMKALEGRTRL 202 >UniRef50_UPI00016B25D7 recombination protein RecR n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25D7 Length = 205 Score = 262 bits (672), Expect = 3e-69, Method: Composition-based stats. Identities = 74/200 (37%), Positives = 123/200 (61%), Gaps = 5/200 (2%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 LT L++ L LPGVG ++A+R A+ LL+ RL+ ++ + + +C Sbjct: 7 PRALTTLIDELGNLPGVGVRTAERYAYHLLRTKAESNKRLSNSIANLKANVKYCPATFAL 66 Query: 64 --TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 +++E+ + ++P R + I VVE P DI A+E+TGQ++G Y VL G +SP+D IGP+ Sbjct: 67 IDSDEEISPLYADPTRNKK-VIAVVEEPLDIIALERTGQYNGTYHVLGGVISPIDNIGPE 125 Query: 122 DIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCA--QYDVEASRIAHGVPVGG 179 + + L R+ ++++ E+I+ATN +VEGE+TA ++ + +V+ SR+A G+PVG Sbjct: 126 QLHIKELVIRIKQDEVEEIIIATNASVEGESTALFLQRYIKENEINVKMSRLARGLPVGV 185 Query: 180 ELEMVDGTTLSHSLAGRHKI 199 +LE D TLSH+L GR + Sbjct: 186 DLEYADQITLSHALEGRRSL 205 >UniRef50_Q0EXX1 Recombination protein RecR n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXX1_9PROT Length = 204 Score = 262 bits (671), Expect = 5e-69, Method: Composition-based stats. Identities = 87/193 (45%), Positives = 118/193 (61%), Gaps = 2/193 (1%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 L +++E L LPGVGPK+A RM LL R LAQAL ++G C C F Sbjct: 7 PAPLARVVEMLSSLPGVGPKTAMRMGLNLLTRPAGDAAALAQALECLHEQVGFCPVCGCF 66 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 +EQ C+ C +P R + +CVVE P D+ +E+ + G Y VL+G LSP+DG+GP+ + Sbjct: 67 SEQGHCHFCDDPSR-DAATLCVVEQPVDVLMMERGHGYRGSYHVLLGRLSPVDGVGPEQL 125 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 L L+QR+ + I E+ILAT+ TV+GEATA+Y+A V SRI+ GVP GGELE Sbjct: 126 RLASLDQRMKQG-INEIILATSATVDGEATAHYLANRYQHAGVSVSRISRGVPEGGELEY 184 Query: 184 VDGTTLSHSLAGR 196 +D TLS +L R Sbjct: 185 LDEHTLSRALDQR 197 >UniRef50_D0RR34 Recombination protein RecR n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RR34_9RICK Length = 205 Score = 259 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 71/204 (34%), Positives = 116/204 (56%), Gaps = 5/204 (2%) Query: 1 MQTS-PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCAD 59 M+ + P+L L+ + LPG+GPKSA+R+A L + + LA L A +I C Sbjct: 1 MKFTEPVLDNLISLISRLPGLGPKSARRIALHLFKNKENLMKPLADTLGIAHEKILRCKI 60 Query: 60 CRTFTEQEV-CNICSNPRRQENG--QICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLD 116 C + C I S +N Q+C+VE+ AD++A+E T + G Y +L G LS L+ Sbjct: 61 CGAIKSVDANCTI-SKCEYIDNSYDQLCIVENIADMWAMEATNIYKGHYHILGGTLSALN 119 Query: 117 GIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVP 176 G P+ + + L R+ + + EVI+AT+ T+EG+ TA+YI + +++ +++AHG+P Sbjct: 120 GSDPESLLIGSLIDRVKKNNVKEVIIATSATIEGQTTAHYINDSLKNLNIKITKLAHGLP 179 Query: 177 VGGELEMVDGTTLSHSLAGRHKIR 200 VG E+E +D TL + R+ I Sbjct: 180 VGSEIEYLDDGTLFSAFKYRNSIG 203 >UniRef50_Q73FZ1 Recombination protein recR n=14 Tax=Rickettsiales RepID=RECR_WOLPM Length = 201 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 76/192 (39%), Positives = 114/192 (59%), Gaps = 1/192 (0%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 + L+ A LP +GP S++R+ LLQ + LA + I C C + Sbjct: 5 IKNLVHAFSKLPSLGPSSSRRLVIHLLQNKEKVMLPLASLIKELADLIIECEVCGNLDTK 64 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 C+IC+NP+R + +CVVE D++A E+ +SG Y VL G LS ++GIGP ++ LD Sbjct: 65 SPCSICTNPKR-DTKLLCVVEELGDLWAFEKGNIYSGLYHVLGGRLSAINGIGPKELNLD 123 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 + +R+ E KI E+I+A NPT+EG+ TA YI EL DV+ SR+A G+P+GGE++ +D Sbjct: 124 TILKRVTESKIEEIIIAINPTLEGQVTAQYIIELLKNLDVKISRLACGIPMGGEIDYLDE 183 Query: 187 TTLSHSLAGRHK 198 TL +L R + Sbjct: 184 GTLRIALTSRQE 195 >UniRef50_B5Y7S4 Recombination protein RecR n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7S4_COPPD Length = 201 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 110/197 (55%), Gaps = 5/197 (2%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT-E 65 L +L + R LPGVGP++A++MA+ L + R + L +I C C Sbjct: 3 LEELSKQFRRLPGVGPRTAEKMAYYWLTLEDDEAERFLRTLENFRRQITLCKRCHNLAVG 62 Query: 66 QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGL 125 ++CNIC + RR + I VVE+P D+ IEQ G + G Y VL G +SP G+ P+ + + Sbjct: 63 SDLCNICQDNRRDKA--IVVVETPQDVENIEQAGIYHGYYHVLHGLISPRKGVTPEQLFI 120 Query: 126 DRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQY--DVEASRIAHGVPVGGELEM 183 L R+ +E IT+VI+AT+ T+EG+ TA+Y+A+ ++ R+ G+PVGGEL Sbjct: 121 SDLFDRIVDEGITQVIIATSFTMEGDITADYLAKQLKTLQPNIPIYRLGTGLPVGGELNY 180 Query: 184 VDGTTLSHSLAGRHKIR 200 D TL + + K+ Sbjct: 181 ADKATLRAAFITKQKVG 197 >UniRef50_C1TMJ9 Recombination protein RecR n=3 Tax=Synergistaceae RepID=C1TMJ9_9BACT Length = 203 Score = 256 bits (654), Expect = 4e-67, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 111/197 (56%), Gaps = 2/197 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M +L+ L+ LPGVG KSA+RMAF + Q + LA A + C C Sbjct: 1 MALPGPFERLIGLLKRLPGVGEKSARRMAFFVFQAPEGYSIELADAFLSLKKNLSVCEIC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T+++ CNICS+P R + +CVVE D+ +IEQ G + G Y+VL G +SPLDG Sbjct: 61 GNLTDRQPCNICSDPLR-DRSTLCVVEGIEDLLSIEQAGVYDGLYYVLGGTVSPLDGEDL 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQY-DVEASRIAHGVPVGG 179 + LD L + +++EVI+ATNP VEG+ T + + D++ SR+++G+PVGG Sbjct: 120 PEGSLDGLINMIERGRVSEVIVATNPRVEGDMTYHAVLSALKGMSDLKKSRLSYGLPVGG 179 Query: 180 ELEMVDGTTLSHSLAGR 196 +E D TL ++ R Sbjct: 180 SIEFADRVTLHAAMETR 196 >UniRef50_C0QZV8 Recombination protein recR n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=RECR_BRAHW Length = 201 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 113/202 (55%), Gaps = 3/202 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M L +L + + LPG+G ++A R+A L D + L+ I C C Sbjct: 1 MNNIQSLDKLTQIISRLPGIGTRTAMRLALYLFDCDDEYLKEFSDVLSSLHENIKLCQVC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 + ++ ++C+ICSN +R+ + +IC+VES D+ AIE+T +++G Y +L G +SPL GIG Sbjct: 61 YSLSDNDICDICSNDKRE-HNKICIVESYPDMLAIEKTEEYNGVYHILGGLISPLKGIGI 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQ--YDVEASRIAHGVPVG 178 DI + L +R+ I E+++A + ++E + TA+YI + ++ +RI +G+ + Sbjct: 120 SDIRIKELIERVNNNSIEEIMIAFSASLEADTTASYIYKTLKDNNFNGRITRITYGISLA 179 Query: 179 GELEMVDGTTLSHSLAGRHKIR 200 ++E D +L+ S+ R + Sbjct: 180 SDIENADSRSLARSILDRVDMN 201 >UniRef50_UPI000174441B recombination protein RecR n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174441B Length = 202 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 77/198 (38%), Positives = 120/198 (60%), Gaps = 2/198 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 + +L+ ++ LPG+G +SA+R+ ++ R + LA+AL + +G C +C Sbjct: 6 YPAPIRELILQMKSLPGIGQRSAERLVLWMMGRGHARAAELARALAQLEQRVGICPECGF 65 Query: 63 FTEQEV-CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 F E++ C +C + +R + +CVVE AD+ +E++G FSG+Y VL G LSPLD I P Sbjct: 66 FIERDAACGLCQSDKR-QTTVVCVVEQAADVLRLERSGAFSGQYHVLGGRLSPLDNITPS 124 Query: 122 DIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGEL 181 D+ + L R+ EVILA + VEGEATANY+A++ V+ +R+A G+P GG L Sbjct: 125 DLRIRELAARVPALGAEEVILALSADVEGEATANYLADILRPLGVKVTRLAQGMPAGGGL 184 Query: 182 EMVDGTTLSHSLAGRHKI 199 + VD TL H+L+GR + Sbjct: 185 DHVDEMTLHHALSGRRAM 202 >UniRef50_B2S0G5 Recombination protein RecR n=4 Tax=Borrelia RepID=B2S0G5_BORHD Length = 194 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 78/194 (40%), Positives = 113/194 (58%), Gaps = 1/194 (0%) Query: 6 LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTE 65 ++ L+ + LPG+G K+A RM + +L + L Q L+ S I C +C F E Sbjct: 2 IIQDLIVLVSKLPGIGKKTASRMVYDILYKGEEYAKNLGQILSNLHSSIRKCKNCYNFAE 61 Query: 66 QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGL 125 +E C+IC + R +N ICVVE P D+ IE TG++ G YFVL GHL PL IGP+ + L Sbjct: 62 EEFCDICMDLSRNKN-VICVVEMPQDLEVIESTGEYDGFYFVLHGHLDPLKDIGPNRLNL 120 Query: 126 DRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVD 185 D+LE + + EVI+AT ++EG+ TANYI+ + D+ +RIA G+PVGG + D Sbjct: 121 DKLEGYVGALEAQEVIIATEFSIEGDVTANYISSILKNLDINVTRIASGLPVGGSISNAD 180 Query: 186 GTTLSHSLAGRHKI 199 T +L R + Sbjct: 181 KMTTLRALRLRFNM 194 >UniRef50_C1QBW2 Recombination protein RecR n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QBW2_9SPIR Length = 203 Score = 252 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 113/201 (56%), Gaps = 3/201 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 + L +L + + LPG+G ++A R+A L D A L I C+ C Sbjct: 3 LNNIQSLDKLTQIISRLPGIGGRTAMRLALYLFDCDEEYLKEFADTLYTLHDNIKLCSKC 62 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 + ++ ++C ICSN +R+ + +ICVVE+ D+ AIE+T +++G Y VL G ++PL GIG Sbjct: 63 YSLSDNDICYICSNDKRE-HNKICVVETYPDMLAIEKTEEYNGVYHVLGGLIAPLKGIGI 121 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDV--EASRIAHGVPVG 178 DI + L +R+ E I E+++A + ++E + TA YI +L + +RI +G+ + Sbjct: 122 SDIRIKELIERVNTENIDEIMIAFSASLEADTTAGYIFKLLKDNNYTGRVTRITYGISLS 181 Query: 179 GELEMVDGTTLSHSLAGRHKI 199 ++E D +L+ S+ R ++ Sbjct: 182 SDIENADSRSLARSILDRVEM 202 >UniRef50_Q5PB75 Recombination protein recR n=5 Tax=Anaplasma RepID=RECR_ANAMM Length = 195 Score = 251 bits (643), Expect = 8e-66, Method: Composition-based stats. Identities = 67/193 (34%), Positives = 110/193 (56%), Gaps = 1/193 (0%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 +T+L+ LP +GP S++R+ LL+ + + LA + C C Sbjct: 3 ITKLINLFAKLPSLGPASSRRIVLHLLRHRQDVMVPLAAGIRELEMHTKECTICHNLDTI 62 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 C+ICS+ R ++ ICVVE D++A E+ +SG Y VL G LS L GIGP+D+ L Sbjct: 63 SPCSICSDKGRDQS-IICVVEELGDLWAFERGRIYSGVYHVLGGALSALSGIGPEDLNLG 121 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 + R+ + EVI+AT+ ++G+ T +YIA++ D + +R+A G+P+GGE++ +D Sbjct: 122 GIVDRIRTHGVKEVIVATSNDMDGQVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDE 181 Query: 187 TTLSHSLAGRHKI 199 TL +L+ R+ I Sbjct: 182 GTLRAALSSRYVI 194 >UniRef50_B3R068 Recombination protein recR n=1 Tax=Candidatus Phytoplasma mali AT RepID=RECR_PHYMT Length = 206 Score = 249 bits (638), Expect = 3e-65, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 117/205 (57%), Gaps = 8/205 (3%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLL-QRDRSGGMRLAQALTRAMSEIGHCAD 59 M+ SP + +L+E+ LPGVG K+A+R F L+ Q++++ + L++ L ++ I C Sbjct: 1 MKNSPTVEKLIESFTLLPGVGKKTAERYTFFLINQKNKNKILYLSKHLKELVNNIKSCNI 60 Query: 60 CRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 C TE+ +CN CS+ +R ++ I +V D+Y E+ + G Y +L G + I Sbjct: 61 CGYITEKNICNFCSDSQR-DHSTIMIVADNRDVYCFEKINHYHGLYHILGGLIDFSRCIK 119 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANY----IAELCAQYDVEASRIAHGV 175 P+++ + L+ RL I E+I+ATN T+EGE TA Y + + ++ +++A+G+ Sbjct: 120 PENLNFNSLKDRLKT--IKEIIIATNSTLEGEITATYSKKFLKKYLKDEKIKITKLAYGI 177 Query: 176 PVGGELEMVDGTTLSHSLAGRHKIR 200 P+G + +D TL +++ R+ + Sbjct: 178 PIGLDFNYLDEKTLCNAINNRNNFK 202 >UniRef50_B0TY95 Recombination protein recR n=18 Tax=Francisella RepID=RECR_FRAP2 Length = 201 Score = 249 bits (637), Expect = 4e-65, Method: Composition-based stats. Identities = 90/198 (45%), Positives = 134/198 (67%), Gaps = 2/198 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 SP +T ++E+LR LP +G KS+QR+A LL + + +A +L A I C C++ Sbjct: 6 FSPKITAVIESLRKLPTIGKKSSQRLALYLLDKSPETAITIANSLLDAAENIKKCKYCQS 65 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 TE++VC+IC + R E+ ++C++ES D+ AIE+ G F G+YFVL G +SPLDGIGP++ Sbjct: 66 LTEKDVCDICGSQNRDES-KLCIIESMLDLVAIEEAGFFKGKYFVLNGRISPLDGIGPNE 124 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + LD LEQ + +I E+ILA +PTVEGE TA++I+++ + D++ SRI GVP GGELE Sbjct: 125 LKLDILEQIIINREINEIILAISPTVEGETTAHFISQMIGK-DIKISRIGFGVPFGGELE 183 Query: 183 MVDGTTLSHSLAGRHKIR 200 +D TL H+ R I+ Sbjct: 184 YLDQQTLIHAFNARTNIK 201 >UniRef50_B7CCG8 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG8_9FIRM Length = 195 Score = 249 bits (636), Expect = 6e-65, Method: Composition-based stats. Identities = 75/195 (38%), Positives = 107/195 (54%), Gaps = 3/195 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 L+ + LPGVG K+A+R AFT+L + +A+ L ++ C C Sbjct: 2 YPKTFDDLIYEFQKLPGVGAKTAERYAFTVLSWNEDEISEMAETLINLKKKVKKCTCCGN 61 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 TE E+C C + +R +N ICVV++P DI IE +F+G Y VL G ++ G+ PD Sbjct: 62 LTEDELCEFCKSSKRNQN-IICVVQNPKDISVIESMQEFNGVYHVLDGLINTQKGVLPDQ 120 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + + L +R+ E EVILA +PTVEGE TA YI++L SR+AHG+PVG L+ Sbjct: 121 LNIMSLLKRI-NENTEEVILALDPTVEGETTALYISKLLEGK-CRVSRLAHGIPVGSHLD 178 Query: 183 MVDGTTLSHSLAGRH 197 D TL + GR Sbjct: 179 YTDAMTLLKAFEGRK 193 >UniRef50_B1ZW44 Recombination protein RecR n=3 Tax=Verrucomicrobia RepID=B1ZW44_OPITP Length = 198 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 2/195 (1%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 +L + L+ LPG+G +S++R+A LL L AL A + C C Sbjct: 2 PSAFEKLQQQLKQLPGLGYRSSERIALHLLVEKPQRLPALVAALEEAARTVRRCTRCGNL 61 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 E E+C IC++ RR + +CVVE D+ A+E++G + G Y VL G LSP+ G+GPDD+ Sbjct: 62 AEAELCPICADERRDPS-LVCVVEEVPDLVALERSGAYRGVYHVLHGKLSPMHGVGPDDL 120 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDV-EASRIAHGVPVGGELE 182 + L R+ + E+ILA + VEGEAT +Y+ E + + +RI G+P GG + Sbjct: 121 NVASLLARVESGAVGELILALSNDVEGEATCHYLTEQLKKGKAPQITRIGFGLPSGGGVL 180 Query: 183 MVDGTTLSHSLAGRH 197 D TL +L R Sbjct: 181 YADSVTLKSALDARR 195 >UniRef50_A9GQA8 DNA repair and genetic recombination protein n=2 Tax=Bacteria RepID=A9GQA8_SORC5 Length = 238 Score = 244 bits (625), Expect = 9e-64, Method: Composition-based stats. Identities = 74/204 (36%), Positives = 109/204 (53%), Gaps = 8/204 (3%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 L+++ + L LPGVG K+AQR A L+ L L I C C Sbjct: 36 PGRLSRVAQLLARLPGVGEKTAQRFALFLVTAGEDTARDLGGELVELCDHIRPCIRCGHI 95 Query: 64 TEQE-----VCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGI 118 E + +C IC + RR + +CVV D+ AIE++G GRYFVL LSPL+G+ Sbjct: 96 AELDDGGRALCAICLDTRR-DGALLCVVARVQDLLAIERSGAMRGRYFVLGRLLSPLEGV 154 Query: 119 GPDDIGLDRLEQRLAE--EKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVP 176 G +++ L+ L R+ + + + EV++AT P+V+GEATA +A ++ +RIA GVP Sbjct: 155 GAEELPLEALRARVRDPEQPVREVLVATPPSVDGEATALLLARELGAMGIQVTRIASGVP 214 Query: 177 VGGELEMVDGTTLSHSLAGRHKIR 200 GG+LE D TL ++ GR Sbjct: 215 HGGDLEFADQVTLGRAIEGRKSFG 238 >UniRef50_Q4FNA8 Recombination protein recR n=5 Tax=root RepID=RECR_PELUB Length = 203 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 112/201 (55%), Gaps = 3/201 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ + +L++ + LPG+GPKSA+R+ L+ +A L + + C C Sbjct: 1 MQNINEIEELIKLISKLPGLGPKSAKRIVLKLINNRDELVKPMANTLAQVYKNVIRCQSC 60 Query: 61 RTFTEQEV-CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 T + CN C N + ++ +ICVVE AD ++IE + + G + +L G +S G Sbjct: 61 GTLKSNSLGCNNCENSK-EKYNKICVVEDIADQWSIENSNIYKGYFHILGGTIS-SAGQR 118 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 +D+ ++ L +R++ E I EVILAT+ TVEG+ TA YI + + + +++A G+PVGG Sbjct: 119 KEDLLINSLVERVSRENIEEVILATSATVEGQTTAYYIEDSLKKTSTKVTKLAQGLPVGG 178 Query: 180 ELEMVDGTTLSHSLAGRHKIR 200 E+E +D TL + R I+ Sbjct: 179 EIESLDDGTLYSAFKNRTGIK 199 >UniRef50_Q0BVJ5 Recombination protein recR n=184 Tax=Bacteria RepID=RECR_GRABC Length = 202 Score = 243 bits (622), Expect = 2e-63, Method: Composition-based stats. Identities = 76/190 (40%), Positives = 112/190 (58%), Gaps = 6/190 (3%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 P L QL+ L LPG+GP+SA+R A LLQ+ + + LA A+ A + C C Sbjct: 4 PELEQLIALLARLPGLGPRSARRAALRLLQQPETRLLPLAAAMQNAARAVKTCRVCGNLD 63 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 + C++C++P R+ NG ICVVES D++A+++ G + G Y VL G LS L G GPD + Sbjct: 64 SADPCSVCTDPSRE-NGLICVVESVGDLWAMDRAGIYRGLYHVLGGVLSALAGTGPDALN 122 Query: 125 LDRLEQRLAEE-----KITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 L +R+ +TEVILA TV+G TA+++AE V +R+A G+P+GG Sbjct: 123 WPALMRRIESSRPSATPVTEVILALGATVDGATTAHWLAEQLRPMGVSVTRLAQGIPIGG 182 Query: 180 ELEMVDGTTL 189 L+++D TL Sbjct: 183 ALDVLDDGTL 192 >UniRef50_D1NBH0 Recombination protein RecR n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NBH0_9BACT Length = 210 Score = 242 bits (618), Expect = 6e-63, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 111/198 (56%), Gaps = 2/198 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 + + +L+ AL+ LPG+G + A+R+A ++L + L + + + +G C +C Sbjct: 5 LSYPDAVEELIGALKQLPGIGRRGAERLALSMLGWEPEKLQYLGKLVETLPATVGSCPEC 64 Query: 61 RTFTE-QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 + E+C +C P R + +CVVE+ A ++AIE +G F GRY VL G LSPLD Sbjct: 65 GALSNAGELCAVCRLPDR-DRQLVCVVETMAQVFAIEASGNFRGRYHVLGGRLSPLDAEN 123 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 + L++L ++ E+ILA +P VEG ATA Y+AEL V ++ A G+P G Sbjct: 124 GAGLNLEKLIGLARSGQVREIILALSPDVEGRATAIYLAELLRDAPVRVTQPALGLPAGA 183 Query: 180 ELEMVDGTTLSHSLAGRH 197 L DG T++ +L+GR Sbjct: 184 NLSYADGATIAAALSGRT 201 >UniRef50_Q1MPV5 Recombinational DNA repair protein (RecF pathway) ref|ZP_00131299.1| 353: Recombinational DNA repair protein (RecF pathway) n=2 Tax=Desulfovibrionaceae RepID=Q1MPV5_LAWIP Length = 203 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 113/198 (57%), Gaps = 3/198 (1%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 +L ++ L LPG+GPKSA R+A T L+ S L +++ ++G C+ C Sbjct: 6 PEILRTVIGQLTKLPGLGPKSAMRIAMTFLKWPESETRSLGKSIYELRDKLGLCSSCGAL 65 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 ++ +C +C++ R +N +C+V + +E+ G F GRY +L G L+PLD +G D + Sbjct: 66 SDSNLCFVCADSERLDN-LLCIVSEWDSMVTLEEVGFFQGRYMILGGLLAPLDNMGLDKL 124 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYD--VEASRIAHGVPVGGEL 181 +DRL RL + ++ EVILA T+E E TA I L ++ + +R+A G+P+G E+ Sbjct: 125 EIDRLIDRLNKGEVKEVILALGSTIEAETTATMIYSLISKRFPYIRVTRLAQGIPLGAEV 184 Query: 182 EMVDGTTLSHSLAGRHKI 199 + +D TL SL R ++ Sbjct: 185 KFMDRETLRQSLQYRQEL 202 >UniRef50_B8DQU5 Recombination protein recR n=13 Tax=Desulfovibrionales RepID=RECR_DESVM Length = 201 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 110/200 (55%), Gaps = 3/200 (1%) Query: 2 QTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCR 61 + L L+E L LPG+GPKSA R+A TLL+ S RL +A+ + C C Sbjct: 3 RLPEPLKALVEQLSRLPGLGPKSALRLAMTLLKWPASETRRLGRAVHDLRDNLHLCGRCG 62 Query: 62 TFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 T+ + C IC++P R +C+V + +E+ G + G+Y +L G L+PLD + D Sbjct: 63 ALTDVDPCGICTDPARS-GETLCLVSEWDSLLTLEEGGFYKGQYLILGGLLAPLDNLHAD 121 Query: 122 DIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELC--AQYDVEASRIAHGVPVGG 179 + LDRL +R+AE + EV++A TVE E TA YI + V +R+A G+P+G Sbjct: 122 SLELDRLTKRMAEGTVREVVMALGTTVEAENTATYIRNMIVRQYPQVRVTRLAQGIPLGS 181 Query: 180 ELEMVDGTTLSHSLAGRHKI 199 E++ +D TL S+ R + Sbjct: 182 EVKFMDRETLRQSMQYRQDL 201 >UniRef50_O67455 Recombination protein recR n=3 Tax=Aquificales RepID=RECR_AQUAE Length = 211 Score = 240 bits (613), Expect = 2e-62, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 115/197 (58%), Gaps = 3/197 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 L + +E ++ +P G + A R + LL+ ++ + + + A+ + C +C Sbjct: 16 FPKSLKEALEGIKEIPTYGERGASRFMYNLLKLEKEKRKEIIEKVLEAVEVLRPCRECFL 75 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 T++EVC ICS+ +R + ICVVE D YAIE+ ++ G Y VL GH++PL+GI +D Sbjct: 76 ITDREVCPICSDEKRSKKF-ICVVEESQDAYAIEKLERYKGVYHVLQGHIAPLEGISAED 134 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQY--DVEASRIAHGVPVGGE 180 + +D L +R+ + + EVILATNP VEGEATANYIA L + V+ +R A+G G Sbjct: 135 LTIDALMERIKKYQPKEVILATNPNVEGEATANYIAGLIRRKFPAVKITRTAYGFQFGSL 194 Query: 181 LEMVDGTTLSHSLAGRH 197 +E VD +L S+ R Sbjct: 195 IEFVDEYSLEKSMENRK 211 >UniRef50_Q3KMC2 Recombination protein recR n=12 Tax=Chlamydiaceae RepID=RECR_CHLTA Length = 200 Score = 239 bits (612), Expect = 3e-62, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 117/199 (58%), Gaps = 4/199 (2%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 ++ +++L+ L+ LPG+G KSA+++AF LL+ D S +AQAL + C++C Sbjct: 2 LKYPDYISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQIEAMAQALQEFSTSHATCSNC 61 Query: 61 RTF--TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGI 118 ++ CN CS R ++ +C+V +P D++A+E++ F G YFVL LSP+ G Sbjct: 62 FCLKISQTSPCNFCSESR--DSSSLCIVATPKDVFALEKSKIFKGHYFVLGNLLSPITGK 119 Query: 119 GPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVG 178 L L+QR+ E+I+A + T+EG+ATA ++ + + ++ SR+A G+PVG Sbjct: 120 HLSLEKLAILKQRIEACSPKEMIIALDATLEGDATALFLKQEFSYLPIKISRLALGMPVG 179 Query: 179 GELEMVDGTTLSHSLAGRH 197 + VD TL+ + +GR+ Sbjct: 180 LSFDFVDANTLARAFSGRN 198 >UniRef50_A5CCA2 Recombination protein recR n=17 Tax=Rickettsieae RepID=RECR_ORITB Length = 203 Score = 238 bits (609), Expect = 8e-62, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 111/197 (56%), Gaps = 2/197 (1%) Query: 2 QTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCR 61 + S ++ +L+ + LPG+G +SA+R+ L+Q L LT ++ I C C Sbjct: 3 KDSNIIEELIFSFAQLPGLGNRSARRIVLYLMQDKEVRIKNLNNQLTSVLNNIMECDYCG 62 Query: 62 TFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG-P 120 +CNIC + R ++ I +VES AD++A+E++ F G Y VL LS + G Sbjct: 63 NLDVVSICNICRHSER-DSSIIAIVESVADLWALERSKVFKGWYHVLGKTLSAVSGNDAI 121 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + + L +L R+ E K+ E+ILATN T++G+ TA ++ + +++ S++A G+P+GGE Sbjct: 122 NSLKLPKLLNRIREYKVQEIILATNSTIDGQMTAFFVIDYLKDENLKISKLASGIPLGGE 181 Query: 181 LEMVDGTTLSHSLAGRH 197 L+ +D TL + R Sbjct: 182 LDYLDEGTLLAAFKARQ 198 >UniRef50_A4BJR1 Recombination protein RecR n=1 Tax=Reinekea blandensis MED297 RepID=A4BJR1_9GAMM Length = 203 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 78/201 (38%), Positives = 119/201 (59%), Gaps = 1/201 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M +P +L++AL+ LPGVG +SAQRMA LL+R+ G RL+ AL+ A++ + C C Sbjct: 1 MAFTPATEKLIQALQALPGVGVRSAQRMALQLLEREPETGQRLSSALSDALTLVHKCPQC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 RT TE ++C +C+NP R + ICVV S D IE + F GRYFVL G LSP+DGIGP Sbjct: 61 RTLTEDDLCGVCANPDR-DASVICVVASDVDRAGIEMSAAFQGRYFVLHGVLSPIDGIGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + +GL L + +++E++LA + +E EAT ++I E + + +R+ G Sbjct: 120 ETLGLVELVELARSGEVSEIMLALDDRLESEATVHFIKEQFKESGLTVTRVPFHQMKSGA 179 Query: 181 LEMVDGTTLSHSLAGRHKIRF 201 L+ D + +L + + F Sbjct: 180 LDQADSRVIEQALTQKQTLGF 200 >UniRef50_D0W4J6 Recombination protein RecR n=3 Tax=Neisseriaceae RepID=D0W4J6_NEICI Length = 206 Score = 232 bits (592), Expect = 6e-60, Method: Composition-based stats. Identities = 81/203 (39%), Positives = 120/203 (59%), Gaps = 4/203 (1%) Query: 1 MQTS---PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHC 57 M +L+ AL+ LP VGPKSAQR+A+ LLQ R L AL A+ ++ HC Sbjct: 1 MMNPKKQDAFQRLIGALKVLPNVGPKSAQRIAYHLLQHKRKEAEELVDALQTALRQVDHC 60 Query: 58 ADCRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDG 117 + C TF E +C+IC++P R ++ +V PAD+ +E G YFVLMG ++ G Sbjct: 61 SMCNTFCEGGLCSICADPSRDVR-KLMIVHMPADVSNMEAANCHDGLYFVLMGQINTALG 119 Query: 118 IGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPV 177 + I LD+L +RL +E+I E+I+AT T EG ATA ++E + + SR++ G+P+ Sbjct: 120 MDVSAIALDKLAERLKKEEIEEIIIATAFTAEGNATAFVLSEFFKKLPYKISRLSQGIPL 179 Query: 178 GGELEMVDGTTLSHSLAGRHKIR 200 GGELE VD TL+ ++ R I+ Sbjct: 180 GGELEYVDAGTLAQAVYERRLIK 202 >UniRef50_B1AI75 Recombination protein recR n=15 Tax=Ureaplasma RepID=RECR_UREP2 Length = 201 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 2/201 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M L++AL+ LPGVG K+A + AF LLQ+D+ L + + A + I C C Sbjct: 1 MSKPVEFEMLVDALKSLPGVGTKNANKWAFFLLQQDQKYIDDLIKRIKEAKTNILKCKYC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 FT ++ C+IC N R + ++ +V + D+ IE ++G Y + G +S + Sbjct: 61 ANFTNKDECDICLNEYR-DFTKLMIVTTNEDLERIESANIYNGLYHITNGEISLRKNVVI 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQ-YDVEASRIAHGVPVGG 179 + + +++R+ E+I+AT+ T +GE TA+YI + D++ RI G+P+ Sbjct: 120 EHTNIKTIKERVLNGSFKEIIIATSYTHDGEVTADYIIRMLEDIKDLQIYRIGFGIPLNS 179 Query: 180 ELEMVDGTTLSHSLAGRHKIR 200 ++ D TL SL + KIR Sbjct: 180 SIDYADDETLKQSLINKRKIR 200 >UniRef50_Q7NAN7 RecR n=2 Tax=Mycoplasma gallisepticum RepID=Q7NAN7_MYCGA Length = 213 Score = 223 bits (569), Expect = 4e-57, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 101/196 (51%), Gaps = 1/196 (0%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 L+E + LP V K A+++ L+ + L L RA I C C+ ++ Sbjct: 15 NEFNNLVEQISDLPSVSKKQAKKITQYLMTKSDRYVYDLIDVLKRAKLSIKICEMCQGWS 74 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 + +C+ICS+ R N ++C+V D+ IE++ + G+YF+L +S + ++I Sbjct: 75 NRSICSICSDESRN-NNELCIVSFFDDLNVIEESQAYHGKYFILNHEISKKNKRIIEEIN 133 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 D L + ++KI +VI+ATN T +G+ TANY+ L +D++ R+ G+P ++ Sbjct: 134 FDLLLDLIKKQKIEKVIIATNFTQDGQTTANYLRFLLDDFDLKIYRLGMGLPYNSSIDYA 193 Query: 185 DGTTLSHSLAGRHKIR 200 D +L + + I+ Sbjct: 194 DSFSLKGAFENKQLIK 209 >UniRef50_B9L9M2 Recombination protein RecR n=1 Tax=Nautilia profundicola AmH RepID=B9L9M2_NAUPA Length = 187 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 112/199 (56%), Gaps = 12/199 (6%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ + +L+EA LP +G KSA R+A ++ + D+ ++L A+ ++ I C C Sbjct: 1 MKDLHSINRLIEAFEELPSIGKKSATRLALSIAK-DKFKALKLINAIEDVVANIKECEIC 59 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 F+E E+C+IC++ R + + +VE+ DI IE++G ++G YFVL Sbjct: 60 GNFSEHEICDICASENRDK--TLAIVENSKDIMIIEESGSYNGYYFVL---------THI 108 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 DD + +L + + +++I EVI A P+VE EA + YI + ++E ++IA GVP G Sbjct: 109 DDEVIQKLREIIKDKEIKEVIFAFPPSVESEARSLYIEDKLKDLNIEFTQIAQGVPTGVH 168 Query: 181 LEMVDGTTLSHSLAGRHKI 199 E VD +L+ ++ R K+ Sbjct: 169 FENVDVNSLAKAIKLRFKL 187 >UniRef50_Q98RF8 Recombination protein recR n=1 Tax=Mycoplasma pulmonis RepID=RECR_MYCPU Length = 191 Score = 220 bits (561), Expect = 2e-56, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 102/197 (51%), Gaps = 6/197 (3%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ + L+ L+ LPGVG K A++++F LL+++ + ++ ++ I C +C Sbjct: 1 MKN-QYIDNLILNLKKLPGVGTKQAEKISFFLLKQNENEVEQIINSIVDLKKNIKECQNC 59 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 +C+ C + R + Q+ + E+ +D E+ G + G+YF++ + + Sbjct: 60 NFLQSNNICHFCMDKSRNK--QLMIFETTSDALKFEKLGIYRGKYFIIKNLIENVKNANE 117 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 D+L + E+I+A NPT+EG+ T+NYI + + ++ +++A G+P+ + Sbjct: 118 PKWK-DKLLHYASN--FEEIIIALNPTIEGQITSNYIKVILEEVALKVTKLAQGLPINSQ 174 Query: 181 LEMVDGTTLSHSLAGRH 197 ++ +D TL+ S R Sbjct: 175 IDYIDPITLNLSFENRK 191 >UniRef50_B4U725 Recombination protein RecR n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U725_HYDS0 Length = 223 Score = 219 bits (558), Expect = 6e-56, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 112/217 (51%), Gaps = 26/217 (11%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 L + +E ++ +PG G K+A R + L+ D+ + ++L I C +C Sbjct: 8 PRNLLKALENIKHIPGYGEKNASRFVYGFLKLDKIKKEDIVKSLENLF-SITTCKECNIL 66 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 T+QEVC ICSNP+R + I VVE D Y IE+ +F G Y +L G +SPL+GI P+D+ Sbjct: 67 TDQEVCAICSNPKRSKK-YIAVVEESQDAYKIEKLERFKGVYHILGGRISPLEGIAPEDL 125 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDV----------------- 166 ++ L++R+ + E+I+ATNP EGEATANY+ ++ + Sbjct: 126 SIELLKERIRKYNPKEIIIATNPNPEGEATANYLIKIIKSLNNKSATSMPRTTSMPRTTS 185 Query: 167 -------EASRIAHGVPVGGELEMVDGTTLSHSLAGR 196 + +RIA + G +E VD +L S+ R Sbjct: 186 LPRSTTPKITRIATAIQFGTLIEYVDDLSLEESIEKR 222 >UniRef50_A1W0P8 Recombination protein recR n=21 Tax=Epsilonproteobacteria RepID=RECR_CAMJJ Length = 190 Score = 215 bits (550), Expect = 5e-55, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 110/199 (55%), Gaps = 10/199 (5%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 ++ +L+E+ LP +G K+A R+A+ L ++ GM+LA + A+ I C C Sbjct: 2 VKGLEKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPCEQC 61 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 +E E+C ICS+ R +N +C+VESP DI +E++ ++G YFVL Sbjct: 62 GALSENELCEICSDEERNKN-ILCIVESPKDILTLEESQSYNGLYFVLDEL--------- 111 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 ++ L++L+Q + + I+E+I A ++ +AT +I + ++ S+IA G+P G Sbjct: 112 NEEKLEKLKQIILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFSKIAQGIPSGVN 171 Query: 181 LEMVDGTTLSHSLAGRHKI 199 LE VD +L+ ++ R KI Sbjct: 172 LENVDLISLNKAMNFRTKI 190 >UniRef50_C8PFQ8 Recombination protein RecR n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PFQ8_9PROT Length = 189 Score = 215 bits (548), Expect = 8e-55, Method: Composition-based stats. Identities = 57/199 (28%), Positives = 100/199 (50%), Gaps = 10/199 (5%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M + +L+ + LPGVG KSA R A+ + ++ G+ LA + A+ + C C Sbjct: 1 MSGTDRFEELVASFEKLPGVGKKSALRFAYYVSVQNSFLGLNLAHNIEEAVRGLHRCRIC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 E E+C C++ R+ + +IC+VE+P DI+ +E ++GRYFVL Sbjct: 61 GAVCEGEICEYCADDERE-SDKICIVENPKDIFILESNKIYNGRYFVLD---------AA 110 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 D+ + L + ++ E+I A P + + Y+ + A ++ +++A GVP G Sbjct: 111 DEDKIAALREMVSRNGARELIFALTPGINSDGIMLYVEDKLADLSLKFTKLAQGVPTGVS 170 Query: 181 LEMVDGTTLSHSLAGRHKI 199 L+ VD +L ++ GR I Sbjct: 171 LDNVDMLSLIKAINGRTDI 189 >UniRef50_Q2STA5 DNA repair protein RecM n=5 Tax=Mollicutes RepID=Q2STA5_MYCCT Length = 196 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 4/194 (2%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 + +++E++R G+ K+++R+ LL ++ L + I C C + Sbjct: 4 SIFNEIVESIRTNEGLTKKTSERLLVNLL-LNKDKLDEFINQLNKVNQLISTCKICGYLS 62 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 E C +CS R +N IC+V + D IE ++ G Y +L G ++ I D + Sbjct: 63 ENNKCLVCSLDNRNQN-TICIVSTILDAKNIENANKYKGVYHILNGEINLNKNITFDKLN 121 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 + + +R+ ++ TE+ILA N T EGE TANY+ +L + +++ +R+A G+P+G L+ + Sbjct: 122 ISSIFKRINDD--TEIILALNSTFEGELTANYLYKLLSTKNIKITRLAKGIPMGASLDYM 179 Query: 185 DGTTLSHSLAGRHK 198 D TL + R K Sbjct: 180 DEFTLQSAFINRKK 193 >UniRef50_C3XMA4 Recombination protein RecR n=3 Tax=Helicobacter RepID=C3XMA4_9HELI Length = 190 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 62/198 (31%), Positives = 110/198 (55%), Gaps = 10/198 (5%) Query: 2 QTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCR 61 +L+E+L +P VG KSA R+A+ L D+ +++A + + E+ C +C Sbjct: 3 SYPESFAKLVESLERIPSVGRKSAMRLAYFLAFEDKFSALQVAHNIECCVQELRTCEECG 62 Query: 62 TFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 T Q VC IC + R NG++C+V +P +I+ +E++G+F G+YFVL D Sbjct: 63 GITNQAVCEICLDATRN-NGELCIVANPREIFLLEESGEFFGKYFVLDSL---------D 112 Query: 122 DIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGEL 181 + L++LE+ + + ITE+I A +P++ ++ Y+ + + + ++IA G+P G L Sbjct: 113 KLNLEQLERSVTKFGITEIIFAFSPSLGSDSIMLYLEDKLENFGLRFTKIAQGIPTGVSL 172 Query: 182 EMVDGTTLSHSLAGRHKI 199 E VD ++ +L R KI Sbjct: 173 ENVDQLSIIRALQSRVKI 190 >UniRef50_Q17WX2 Recombination protein recR n=17 Tax=Helicobacter RepID=RECR_HELAH Length = 193 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 10/197 (5%) Query: 2 QTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCR 61 + L++ L +P VG KSA +MA+ L + ++L AL A+ + C C Sbjct: 6 NSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKLTHALENALENLKTCTSCN 65 Query: 62 TFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 +E E+C ICS+ R +N Q+C+V P D++ +E F GRY VL + Sbjct: 66 ALSESEICEICSDESR-QNSQLCMVLHPRDVFILEDLKDFLGRYHVLN---------SIE 115 Query: 122 DIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGEL 181 ++ + LE+RL +EKI E+I A PT+ ++ YI + + ++IA GVP G Sbjct: 116 NVDFNALEKRLIKEKIKEIIFAFPPTLANDSLMLYIEDKLQHCHLTFTKIAQGVPAGVNF 175 Query: 182 EMVDGTTLSHSLAGRHK 198 E +D +LS + R K Sbjct: 176 ENIDSVSLSRAFNSRIK 192 >UniRef50_C4XFW1 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XFW1_MYCFE Length = 196 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 100/199 (50%), Gaps = 4/199 (2%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ + +L + L +PG+ K A +M+ L++D+ L +++ + I +C+ C Sbjct: 1 MK-IETIEKLNQVLTTIPGISKKQADKMSNFFLKQDQEYIDNLVKSINDLKTNISYCSIC 59 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 E C +C + R + +VE+ A + I+ ++G Y+VL + + Sbjct: 60 NFLKEGGKCLVCDDKSRY--NFLMIVENAATLRKIDDMNFYNGYYYVLPYLFNLKNNKEI 117 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELC-AQYDVEASRIAHGVPVGG 179 + L + +K EVI+ +P++EGE T ++ +L +Q+ ++ +R A G+P+G Sbjct: 118 KNYDYKELINYIQHKKFDEVIIVLSPSLEGEMTTGHLLKLINSQFKIKVTRAAIGMPMGS 177 Query: 180 ELEMVDGTTLSHSLAGRHK 198 LE +D T+ S+ R+K Sbjct: 178 NLEYLDTFTIKQSIENRNK 196 >UniRef50_A8EUC6 Recombination protein RecR n=6 Tax=Campylobacteraceae RepID=A8EUC6_ARCB4 Length = 190 Score = 209 bits (534), Expect = 3e-53, Method: Composition-based stats. Identities = 60/198 (30%), Positives = 108/198 (54%), Gaps = 10/198 (5%) Query: 2 QTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCR 61 + +L+EA LP +G KSA R+A+ ++ D G+++A ++ A+ I C+ C Sbjct: 3 KGLEKFYELVEAFESLPTIGKKSALRLAYHIVMNDNYCGIKIAHSIENALKNITKCSRCG 62 Query: 62 TFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 + +E E+C C + R +N ++C+V+S DI+ IE + QF GRYFV+ D Sbjct: 63 SMSEHEICEFCLDENR-DNEKLCIVQSAKDIFVIEDSNQFDGRYFVIEEL---------D 112 Query: 122 DIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGEL 181 LD L++ + + ++ A P++ +A +I + +D++ ++IA GVP G L Sbjct: 113 QDVLDSLQRFILNNGVKTILFAITPSIANDAFILFIEDKLKDFDIKFTKIAQGVPTGVSL 172 Query: 182 EMVDGTTLSHSLAGRHKI 199 E VD +LS ++ + +I Sbjct: 173 ENVDILSLSKAIQSKVEI 190 >UniRef50_Q6KIL5 Recombination protein n=1 Tax=Mycoplasma mobile RepID=Q6KIL5_MYCMO Length = 196 Score = 208 bits (531), Expect = 8e-53, Method: Composition-based stats. Identities = 58/199 (29%), Positives = 105/199 (52%), Gaps = 7/199 (3%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M L+ +L+ LPG+ K A++++F ++Q + L A +A S + C +C Sbjct: 1 MNNK-TFENLVLSLKELPGISKKQAEKISFYIIQSKKDVLNNLIDAFQKAKSNLVKCNNC 59 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 +E ++C+IC + R ++ VVES ++ E +SG+YFV+ + D Sbjct: 60 NLISEHQLCSICIDKSRD--NKLMVVESSLEVNKFEDLQIYSGKYFVVDSLIKNFDDKST 117 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQY--DVEASRIAHGVPVG 178 +++ + L EVILA +PT+EGE +A YI L + +++ S++A+G+PVG Sbjct: 118 YFETYNKIFKILPN--ADEVILALSPTLEGEVSAIYIKNLINEKFPNLKISQLANGLPVG 175 Query: 179 GELEMVDGTTLSHSLAGRH 197 ++E +D TL+ + R Sbjct: 176 SQVEYIDSLTLNFAFKNRK 194 >UniRef50_Q30R19 DNA replication and repair protein RecR n=4 Tax=Epsilonproteobacteria RepID=Q30R19_SULDN Length = 189 Score = 208 bits (530), Expect = 9e-53, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 104/195 (53%), Gaps = 11/195 (5%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 +L+EA + LP +G KSA R+A+ ++ ++ G+++A A+ A+ I CA C + Sbjct: 6 EKFNKLVEAFQELPTIGKKSAIRLAYHIVMKNSFVGIKIAHAIEEALGSIKQCAACGGMS 65 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 E E+C IC + R E +C+VE+ DI +E+ F GRYFVL ++ Sbjct: 66 EDELCFICCDESRDET-LLCIVENAKDILLLEENRLFDGRYFVLDSL---------ENFN 115 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 L LE + + E++ A P++ +A YI + + + + S+IA GVP G LE + Sbjct: 116 LSGLESLVKNG-VEEIVFALTPSIANDAVILYIEDKLSDFTINFSKIAQGVPTGVSLENI 174 Query: 185 DGTTLSHSLAGRHKI 199 D +LS +L R K+ Sbjct: 175 DLLSLSRALIDRVKV 189 >UniRef50_Q8EUW2 Recombinational DNA repair protein RecR n=1 Tax=Mycoplasma penetrans RepID=Q8EUW2_MYCPE Length = 201 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 4/199 (2%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 +EAL+ LP + K+A ++A+ L+ D + LT S I C +C Sbjct: 3 PKEFEYFVEALKSLPTISNKNASKIAYFFLEADEVFYSQFLDRLTSLKSNIKFCLNCNNL 62 Query: 64 TEQEV-CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 T + C+IC+ R +N ++C+V D+ IE + FSG YFVL + D Sbjct: 63 TSDSLYCDICNTDSRDKN-KLCIVSYLEDLEKIEASNSFSGLYFVLNTEIKHKDLKTAKK 121 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQ--YDVEASRIAHGVPVGGE 180 I L++LE + + + E+++ TN T++GE T++YI + Y+++ R+A G+P+ Sbjct: 122 INLEKLENMINKFHVREILICTNMTIDGELTSSYIKNFIKEKNYNIDLYRLALGIPMNAS 181 Query: 181 LEMVDGTTLSHSLAGRHKI 199 +E +D +L +S+ + KI Sbjct: 182 IEYIDWESLKYSIENKRKI 200 >UniRef50_A5IZC7 Recombination protein RecR n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IZC7_MYCAP Length = 195 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 2/196 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 + +L + L +P + K A+++A +L+ + + + + +IG C C Sbjct: 2 NIKTIDELTKKLLSIPTITKKQAEKLADYILKSPKDEIKQTLEYILETKDKIGFCEKCNF 61 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 E C C R + VVES A + I T ++G +FVL LS D Sbjct: 62 IVENGKCANC--DRFNLWNTLIVVESVASVKKIFDTDFYNGYFFVLPYLLSMSPKNAKVD 119 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + L + +KITEVI+ +PT+EG+ T + ++C + DV+ +R A G+P+ +E Sbjct: 120 FNYEHLVNFIKTKKITEVIIVLSPTIEGQMTTAQLMQICREIDVKVTRAAVGLPLNANIE 179 Query: 183 MVDGTTLSHSLAGRHK 198 +D T+ ++ R K Sbjct: 180 YIDEFTIKQAIENRTK 195 >UniRef50_Q4A6Z7 Putative recombination protein n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A6Z7_MYCS5 Length = 194 Score = 204 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 4/198 (2%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M L+ + + +R +PG+ K A+++ +L L+ + I C+ C Sbjct: 1 MFNLSLIEEFITKIRKIPGISRKQAEKIVAWILYSKDDEIYELSNYFKKLKDNISFCSFC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 E C IC++ R+ ++ VVE+P I +E+ F G+YFV + + Sbjct: 61 NIPQENNNCYICNDTSRE--NKLLVVENPLIIEKLEKLSLFKGKYFVFKNLVKNEKSLDK 118 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + L +L + EVI +PT+EGE T N I + ++ + +S++A G+P+G Sbjct: 119 FYLDLSKLLKYCKN--FEEVIFGISPTLEGEVTTNLIRKEFEKFQINSSQLAIGIPIGAS 176 Query: 181 LEMVDGTTLSHSLAGRHK 198 ++ +D TL S+ R K Sbjct: 177 IDYMDEITLKFSIKNRQK 194 >UniRef50_Q4A8A7 Recombination protein recR n=4 Tax=Mycoplasma RepID=Q4A8A7_MYCH7 Length = 194 Score = 198 bits (505), Expect = 9e-50, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 6/195 (3%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 L E LR +PG+ K A R+ L+ +A+ +C C Sbjct: 4 ETFKNLAEDLRKIPGISKKQAMRILSFLVDVPIEKIENFVRAICDLKKNTQYCEKCGYLN 63 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 VC IC + +R + +I VVE+ I E+ G++ G+YFV + + + + Sbjct: 64 TNPVCEICLDFQR--SFKILVVENTEMIAKFEEYGKYDGQYFVFGKY--DIKNLENHNAQ 119 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 + +L A + +E+IL + T+EG ANY+A+ ++ +R+A G+P G ++ + Sbjct: 120 IKKLADLAANK--SEIILGLSSTMEGLIFANYLAKHEFLSGLKITRLATGIPFGAIIDYI 177 Query: 185 DGTTLSHSLAGRHKI 199 D TL +L R ++ Sbjct: 178 DNITLDQALKNRQEM 192 >UniRef50_Q14QH4 Putative recombination protein recr dna repair n=1 Tax=Spiroplasma citri RepID=Q14QH4_SPICI Length = 174 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 2/164 (1%) Query: 13 ALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEVCNIC 72 L+ + GVG K+A+R+ F L S L + C C T + VC C Sbjct: 2 ELKTILGVGKKTAERI-FNKLIIKPSLLQTLEHVFNEIKNNYHQCPICSTLMQNNVCLFC 60 Query: 73 SNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRL 132 N R + ++CVV + DI IE T F+G Y VL G ++ +GI PD + LE R+ Sbjct: 61 HNDLRDQT-KLCVVSNFFDIIKIEATKVFNGVYHVLNGEINVKNGITPDKMTFPVLESRM 119 Query: 133 AEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVP 176 ++ I EVI+A T EGE TA Y+ +D++ SR+A G+P Sbjct: 120 NDKIIKEVIIAVGATFEGEVTAQYLKTFLQSFDIKISRLAQGIP 163 >UniRef50_B1VIS4 Recombination protein n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VIS4_CORU7 Length = 273 Score = 186 bits (473), Expect = 4e-46, Method: Composition-based stats. Identities = 50/131 (38%), Positives = 74/131 (56%), Gaps = 2/131 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDR-SGGMRLAQALTRAMSEIGHCADCR 61 L +++ LPG+GPKSAQR+A LL+ R L S + C C Sbjct: 2 FEGPLQDVIDEFASLPGIGPKSAQRIALHLLENATGEDIERFQATLGNLHSGVAFCRICH 61 Query: 62 TFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 ++++VC IC++ R + +CVVE P DI IE+TG++ GRY VL G L PL+G+GP Sbjct: 62 NISQEDVCRICADSSR-DASLVCVVEEPKDIQVIERTGEYRGRYHVLGGALDPLNGVGPG 120 Query: 122 DIGLDRLEQRL 132 ++ + L QR+ Sbjct: 121 ELNVTALVQRI 131 Score = 112 bits (281), Expect = 8e-24, Method: Composition-based stats. Identities = 33/74 (44%), Positives = 50/74 (67%), Gaps = 1/74 (1%) Query: 129 EQRLAEEKITEVILATNPTVEGEATANYIAELCAQY-DVEASRIAHGVPVGGELEMVDGT 187 + +ITEVI+AT+P EGEATA+Y+ L ++ + SR+A G+P+GG+LE VD Sbjct: 200 VEYREAPEITEVIIATDPNTEGEATASYLGRLLKEFPGLTVSRLASGIPMGGDLEFVDEL 259 Query: 188 TLSHSLAGRHKIRF 201 TLS + AGR +++ Sbjct: 260 TLSRAFAGRTQLKL 273 >UniRef50_B3PM36 Recombination protein RecR n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM36_MYCA5 Length = 196 Score = 184 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 6/199 (3%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 LL +L L+ + G+ K + +L + +A + + C C Sbjct: 2 YDELLNKLTIKLKAIQGLNKKQITAIVEYILNAESGELDDIAMLIKTIKTTYKKCLFCNN 61 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 F+ QE C ICS+ R+ ++ VVE+ I E + G+YF+L +P + Sbjct: 62 FSSQEKCEICSDSTRE--NKLMVVENAKTIKQFEVAQIYRGKYFILEALYNPKKPNLLFN 119 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYD--VEASRIAHGVPVGGE 180 L++L L K EV+LA +PT+EG T +Y+ + + ++A G+P+G Sbjct: 120 KNLEKLL--LIATKANEVVLALSPTIEGAITMDYLKKSLRDANNMHNVYQLATGIPLGVN 177 Query: 181 LEMVDGTTLSHSLAGRHKI 199 +E +D TL S + K Sbjct: 178 VEYIDSETLKQSFLKKTKF 196 >UniRef50_D1J7N4 Recombination protein recR n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7N4_MYCHP Length = 196 Score = 179 bits (456), Expect = 4e-44, Method: Composition-based stats. Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 11/203 (5%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M + +L E L+ + K +Q+ F + + ++ + + I C C Sbjct: 1 MNNIE-IQKLEELLKTVFDFTKKQSQKFIFNIFKSSSEDIDQICNQIKALRNSIKKCNIC 59 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 + E +CNIC + R + Q+ +V + DI E G + G+YFV ++S + Sbjct: 60 NRYNENTICNICLDTNRTK--QLMLVGNSLDIDKFENIGLYKGKYFVFDQNISLKN---- 113 Query: 121 DDIGLDRLEQRLAE--EKITEVILATNPTVEGEATANYIAELCAQY--DVEASRIAHGVP 176 +D + L ++L + + E+IL+ +PT+EG+ +YI + +++ G+P Sbjct: 114 EDFIVSSLLEKLIDILKDKNELILSLSPTIEGQFNMHYIKKFLKNKINFTNVFQLSTGIP 173 Query: 177 VGGELEMVDGTTLSHSLAGRHKI 199 +G +E +D TL SL + K+ Sbjct: 174 LGSSVEYIDQDTLKESLLNKIKM 196 >UniRef50_Q08SU2 Recombination protein RecR (Fragment) n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08SU2_STIAU Length = 39 Score = 54.6 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 14/30 (46%), Positives = 20/30 (66%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTL 32 T L +L+ L LPG+G K+AQR+AF + Sbjct: 2 TPDPLNRLVAQLAKLPGIGEKTAQRLAFHI 31 >UniRef50_Q8R979 Topoisomerase n=14 Tax=Bacteria RepID=RGYR_THETN Length = 1117 Score = 51.9 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 45/122 (36%) Query: 52 SEIGHCADCRT-FTEQEV-CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLM 109 + I C+ C FT++ C C++ + + +I E+ DI A+E Sbjct: 629 NSIKRCSSCGAQFTDELPRCPYCNSDKIDDKKKIL--EALRDI-AME------------- 672 Query: 110 GHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEAS 169 + EVI+AT+P VEGE I++ + Sbjct: 673 ---------------------------VDEVIIATDPDVEGEKIGWDISQYIKPVNKNVQ 705 Query: 170 RI 171 RI Sbjct: 706 RI 707 >UniRef50_A9FRC6 DNA topoisomerase I n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FRC6_SORC5 Length = 864 Score = 45.0 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASR 170 L+ L+ A +K EV+LAT+P EGEA A +I+E ++ +R Sbjct: 64 LEELKS--AAKKADEVLLATDPDREGEAIAFHISEEIKNPKLKVAR 107 >UniRef50_D0LR99 DNA topoisomerase n=169 Tax=cellular organisms RepID=D0LR99_HALO1 Length = 894 Score = 44.6 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 51/125 (40%), Gaps = 37/125 (29%) Query: 75 PRRQENGQ----ICVVESPADIYAIEQTGQFSGRYFVLM---------GHLS--PLDGIG 119 R + + + VVESPA I G+Y L GH+ P + IG Sbjct: 127 KSRSKATKQGKALVVVESPAKARTI-------GKY--LGPDYTVKASVGHIKDLPKNKIG 177 Query: 120 --------PDDIGLDRLEQ-----RLAEEKITEVILATNPTVEGEATANYIAELCAQYDV 166 P+ + + ++ R A E++ EV LA +P EGEA A +IAE + Sbjct: 178 VDVDQAFEPEYVVISDKKKVISEIRKAAERVEEVYLAPDPDREGEAIAWHIAEEIKPIND 237 Query: 167 EASRI 171 RI Sbjct: 238 NIKRI 242 >UniRef50_B3PMD8 DNA topoisomerase I n=3 Tax=Mycoplasma RepID=B3PMD8_MYCA5 Length = 620 Score = 44.6 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 27/112 (24%) Query: 80 NGQICVVESPADIYAIEQ--TGQFS-----GRYFVLMGHLSPLDGIGPDDIG-------- 124 + ++ +VESP + I+Q ++ G +L S +DG+G D Sbjct: 2 DQKVLIVESPNKVKTIQQYVGSDYNVVSSVG--HILKLSTSGVDGLGIDFTNWEPMMIQD 59 Query: 125 ------LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASR 170 + L+ A + EV++AT+P EGEA A + + + R Sbjct: 60 RTKAKVIKALKD--ATKNAKEVLIATDPDREGEAIAQNLVDTLKLS--KIYR 107 >UniRef50_B9MRC8 Reverse gyrase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MRC8_ANATD Length = 1122 Score = 43.4 bits (102), Expect = 0.004, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 41/122 (33%), Gaps = 45/122 (36%) Query: 52 SEIGHCADCRT-FTEQ-EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLM 109 + I C C T FT++ + C C++ + +I Sbjct: 635 NSIKRCMKCNTQFTDELDSCPKCASNTIDDKKEI-------------------------- 668 Query: 110 GHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEAS 169 L L + E + EV++AT+P VEGE + I++ + Sbjct: 669 ---------------LKTLRELALE--VDEVLIATDPDVEGEKISWDISQYIKPANSNIK 711 Query: 170 RI 171 RI Sbjct: 712 RI 713 >UniRef50_Q3A7H8 DNA topoisomerase n=13 Tax=Bacteria RepID=Q3A7H8_PELCD Length = 841 Score = 43.4 bits (102), Expect = 0.005, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 23/98 (23%) Query: 83 ICVVESPADIYAIEQTGQFSGR-YFVL------------------MGHLSPLDGIGPDDI 123 + +VESPA IE+ F G Y VL + SPL + P+ Sbjct: 5 LVIVESPAKAKTIEK---FLGPGYKVLASYGHVRALPSKQGSVDVEHNFSPLYHVLPESQ 61 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELC 161 L ++ +K E+ILAT+P EGEA A ++ E Sbjct: 62 KHIELLKK-EAKKSRELILATDPDREGEAIAWHLLEAL 98 >UniRef50_B8E2F6 DNA topoisomerase n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E2F6_DICTD Length = 696 Score = 43.0 bits (101), Expect = 0.006, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 23/112 (20%) Query: 79 ENGQICVVESPADIYAIEQ--TGQFSGRYFVLM--GHLSPL----------DGIGPDDIG 124 +N ++ +VESPA IE+ +F VL GH+ L + P + Sbjct: 2 DNEKLIIVESPAKAKTIEKILGKEFK----VLASYGHIRDLPEKELGVDIENNFKPKYVL 57 Query: 125 L---DRLEQRLAE--EKITEVILATNPTVEGEATANYIAELCAQYDVEASRI 171 L ++ + + +K ++ LAT+P EGEA A ++ E + +RI Sbjct: 58 LPSRKKIIDTIKDLSKKAEKLYLATDPDREGEAIAWHLVEELKLPKEKFTRI 109 >UniRef50_C5CFS3 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=RUVA_KOSOT Length = 195 Score = 43.0 bits (101), Expect = 0.006, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 5/55 (9%) Query: 4 SPLLTQLMEA-----LRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSE 53 +L +++ + L LPG+G K+A+R+ L + + + L+ + Sbjct: 95 PEMLQKMIASKDISGLSRLPGLGKKTAERLVSELYDLVKDYAVEFPKELSDVSED 149 >UniRef50_B5YFC7 DNA topoisomerase n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YFC7_DICT6 Length = 694 Score = 42.7 bits (100), Expect = 0.008, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 23/111 (20%) Query: 80 NGQICVVESPADIYAIEQ--TGQFSGRYFVLM--GHLSPL----------DGIGPDDIGL 125 ++ +VESPA IE+ F VL GH+ L +G P + L Sbjct: 3 KEKLIIVESPAKAKTIEKILGKDFK----VLASYGHIRDLPEKELGVDIENGFKPKYVLL 58 Query: 126 ---DRLEQRLAE--EKITEVILATNPTVEGEATANYIAELCAQYDVEASRI 171 ++ + + +K+ ++ LAT+P EGEA A ++ E + +RI Sbjct: 59 PSRKKIIDTIKDLSKKVEKLYLATDPDREGEAIAWHLVETLKLPKDKFTRI 109 >UniRef50_Q9JN65 DNA topoisomerase 1 n=2 Tax=Mycoplasma gallisepticum RepID=TOP1_MYCGA Length = 719 Score = 41.9 bits (98), Expect = 0.015, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASR 170 +D L +K E+ LAT+P EGEA + ++ ++ + V ++ Sbjct: 88 IDELVD--KAKKADEIYLATDPDREGEAISWHVYDVLKEKGVNVNK 131 >UniRef50_B1VAJ5 DNA topoisomerase n=6 Tax=Acholeplasmataceae RepID=B1VAJ5_PHYAS Length = 655 Score = 41.5 bits (97), Expect = 0.015, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 21/101 (20%) Query: 80 NGQICVVESPADIYAIEQTGQFSGRYFVL--MGHLSPLDGIGPDDIGLD----------- 126 ++ +VESPA I + + F + +L GH+ L G D +G+D Sbjct: 2 KKKVIIVESPAKIKTL--SRFFDDKVEILSSKGHIRDLSLSGKDRLGIDIKNGFIPKYEI 59 Query: 127 -----RLEQ-RLAEEKITEVILATNPTVEGEATANYIAELC 161 L + + + K E+ LAT+P EGEA A +++++ Sbjct: 60 IKEKKTLVESLIKKTKNKEIFLATDPDREGEAIAWHLSKVL 100 >UniRef50_D1BLL7 Holliday junction DNA helicase RuvA n=3 Tax=Veillonella RepID=D1BLL7_VEIPT Length = 202 Score = 41.5 bits (97), Expect = 0.017, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 17/27 (62%) Query: 6 LLTQLMEALRCLPGVGPKSAQRMAFTL 32 ++ ++ L LPG+G KSA+R+ L Sbjct: 101 IINGQVQQLTKLPGIGKKSAERLVLEL 127 >UniRef50_Q3SMS7 DNA topoisomerase n=8 Tax=Proteobacteria RepID=Q3SMS7_THIDA Length = 857 Score = 40.7 bits (95), Expect = 0.030, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 24/35 (68%) Query: 133 AEEKITEVILATNPTVEGEATANYIAELCAQYDVE 167 A +K EV+LAT+P EGEA + +I+E+ + V+ Sbjct: 68 AAKKADEVLLATDPDREGEAISWHISEILKEKKVK 102 >UniRef50_Q9X3X7 DNA topoisomerase 1 n=7 Tax=cellular organisms RepID=TOP1_ZYMMO Length = 1217 Score = 40.7 bits (95), Expect = 0.030, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 21/94 (22%) Query: 82 QICVVESPADIYAIEQTGQFSGR-YFVL------------MGHLSPLDGIGPDDIGLDRL 128 ++ VVESPA IE+ + G Y VL G ++P +G Sbjct: 7 KLVVVESPAKAKTIEK---YLGSGYQVLASYGHIRDLPSKDGSVNPDNGFSMVWQNYPDK 63 Query: 129 EQRLA--EEKITE---VILATNPTVEGEATANYI 157 RL E+ + E +ILAT+P EGEA + +I Sbjct: 64 AHRLKAIEDAVKESDSLILATDPDREGEAISWHI 97 >UniRef50_A8F8Q5 RuvA domain protein n=1 Tax=Thermotoga lettingae TMO RepID=A8F8Q5_THELT Length = 186 Score = 40.7 bits (95), Expect = 0.031, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Query: 6 LLTQLMEALRCLPGVGPKSAQRMAFTL----LQRDRSGGMRLAQALTRAM 51 +++Q +E L PG+G K+A+R+ L + L+ A+ + Sbjct: 99 IISQDVEKLSRFPGIGKKTAERLIAELKDEEFEIKSDYSKELSDAIDALV 148 >UniRef50_O28948 Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus RepID=O28948_ARCFU Length = 287 Score = 40.3 bits (94), Expect = 0.039, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 17/53 (32%), Gaps = 3/53 (5%) Query: 28 MAFTLLQRDRSGGMRLAQALT---RAMSEIGHCADCRTFTEQEVCNICSNPRR 77 + + + +R + L E +C C + +VC C R Sbjct: 233 IVYDIERRKPGFVKNFVRGLVRPAEEFEETKYCKICGEVSSGDVCAFCRLRER 285 >UniRef50_B4ST34 Holliday junction ATP-dependent DNA helicase ruvA n=13 Tax=Xanthomonadaceae RepID=RUVA_STRM5 Length = 197 Score = 40.0 bits (93), Expect = 0.044, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 15/22 (68%) Query: 11 MEALRCLPGVGPKSAQRMAFTL 32 + AL +PG+G K+A+RM L Sbjct: 107 ITALTRIPGIGKKTAERMVLEL 128 >UniRef50_UPI0001BCCB68 Holliday junction DNA helicase RuvA n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCCB68 Length = 200 Score = 40.0 bits (93), Expect = 0.045, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 3/38 (7%) Query: 11 MEALRCLPGVGPKSAQRMAFTL---LQRDRSGGMRLAQ 45 ++A+ LPG+G K+A+R+ L L A Sbjct: 106 VKAITKLPGIGKKTAERIILELKDKLTSSSFDDDSFAD 143 >UniRef50_A6DCG6 Holliday junction DNA helicase motor protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCG6_9PROT Length = 180 Score = 40.0 bits (93), Expect = 0.050, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 23/46 (50%) Query: 11 MEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGH 56 + +L+ +PG+GPKSA+R+ + + + A+ +G Sbjct: 103 INSLKKVPGIGPKSAKRILMEMGDFEIENINPIISQAVTALENLGF 148 >UniRef50_A6LLH1 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Thermosipho RepID=RUVA_THEM4 Length = 189 Score = 39.6 bits (92), Expect = 0.059, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 10/57 (17%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTL----------LQRDRSGGMRLAQALTRA 50 S ++ + ++ L LPG+GPK+A+R+ L L + +AL Sbjct: 99 SAIVNEDVKTLSTLPGIGPKTAERIILELKDSMKEFDVTLTEKDKKILEAIEALVTL 155 >UniRef50_Q2LT40 DNA topoisomerase n=2 Tax=Bacteria RepID=Q2LT40_SYNAS Length = 769 Score = 39.6 bits (92), Expect = 0.063, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 25/108 (23%) Query: 83 ICVVESPADIYAIEQTGQFSGR-YFVL--MGHLSPLD----GIGPDDIG----------- 124 + +VESP + + ++ G Y VL GH+ L GI P + Sbjct: 5 LIIVESPTKVKTL---KKYLGADYEVLASKGHIKDLPKKTLGIDPQNEFQPTYSVIDDKK 61 Query: 125 --LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASR 170 + L++ A + ++ + LA +P EGEA A +IAE + E R Sbjct: 62 KVIADLKK--AAKNVSRIFLAPDPDREGEAIAWHIAEEIKAKNKEIYR 107 >UniRef50_B5YKX8 DNA topoisomerase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKX8_THEYD Length = 777 Score = 39.6 bits (92), Expect = 0.065, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Query: 116 DGIGPDDIGLDRLEQRLAE-----EKITEVILATNPTVEGEATANYIAELCAQYDVEASR 170 G PD I + E+ + E + ++ +AT+P EGEA A +IAE + + R Sbjct: 51 KGFQPDYIIIPGKEKIVKELKDSAKNAQKIFIATDPDREGEAIAYHIAEEIKVPENKVYR 110 >UniRef50_Q1NVI5 DNA recombination protein, RuvA:Helix-hairpin-helix motif n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NVI5_9DELT Length = 212 Score = 39.2 bits (91), Expect = 0.088, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 15/22 (68%) Query: 11 MEALRCLPGVGPKSAQRMAFTL 32 + L+ LPGVG K+A+R+ L Sbjct: 107 IAGLKKLPGVGKKTAERLCLEL 128 >UniRef50_C5NYW8 DNA topoisomerase n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYW8_9BACL Length = 702 Score = 39.2 bits (91), Expect = 0.093, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Query: 132 LAEEKITEVILATNPTVEGEATANYIAELCA-QYDVE 167 L + + EVI+AT+ EGE A YI + +V+ Sbjct: 90 LNRKDVNEVIIATDAGREGELVARYIIDKAKCNKNVK 126 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C9KLD0 Recombination protein RecR n=1 Tax=Mitsuokella m... 305 6e-82 UniRef50_B1YGD0 Recombination protein recR n=96 Tax=Bacteria Rep... 298 6e-80 UniRef50_P74533 Recombination protein recR n=254 Tax=cellular or... 298 1e-79 UniRef50_Q1IY76 Recombination protein recR n=172 Tax=Bacteria Re... 295 6e-79 UniRef50_Q3A7K8 Recombination protein recR n=8 Tax=Bacteria RepI... 295 8e-79 UniRef50_B2TR53 Recombination protein recR n=5 Tax=Firmicutes Re... 293 3e-78 UniRef50_Q38YT8 Recombination protein recR n=11 Tax=Bacteria Rep... 291 8e-78 UniRef50_D2NPN6 Recombinational DNA repair protein n=8 Tax=Bacte... 289 4e-77 UniRef50_Q045U7 Recombination protein recR n=130 Tax=Firmicutes ... 288 8e-77 UniRef50_C4K7W2 Recombination protein recR n=48 Tax=Bacteria Rep... 283 3e-75 UniRef50_C2D9P1 Recombination protein RecR n=1 Tax=Atopobium vag... 279 3e-74 UniRef50_A0L8F5 Recombination protein recR n=5 Tax=Proteobacteri... 279 3e-74 UniRef50_Q03ZG8 Recombination protein recR n=31 Tax=Firmicutes R... 278 5e-74 UniRef50_A5FRM7 Recombination protein recR n=22 Tax=Bacteria Rep... 278 7e-74 UniRef50_C3RP48 Recombination protein recR n=6 Tax=Bacteria RepI... 278 1e-73 UniRef50_Q2LYF5 Recombination protein recR n=3 Tax=Bacteria RepI... 277 2e-73 UniRef50_A7NFA0 Recombination protein recR n=7 Tax=Bacteria RepI... 276 2e-73 UniRef50_Q74GZ7 Recombination protein recR n=2 Tax=Deltaproteoba... 276 2e-73 UniRef50_B9XNI6 Recombination protein RecR n=1 Tax=bacterium Ell... 275 6e-73 UniRef50_Q2RZH8 Recombination protein recR n=1 Tax=Salinibacter ... 275 8e-73 UniRef50_A1HM03 Recombination protein RecR n=5 Tax=Bacteria RepI... 274 1e-72 UniRef50_A1AKR3 Recombination protein recR n=3 Tax=Desulfuromona... 273 2e-72 UniRef50_A5G9K4 Recombination protein recR n=2 Tax=Deltaproteoba... 272 4e-72 UniRef50_A8ZU38 Recombination protein recR n=2 Tax=Desulfobacter... 272 4e-72 UniRef50_Q8RG96 Recombination protein recR n=12 Tax=Fusobacteria... 272 5e-72 UniRef50_C7GZD8 Recombination protein RecR n=1 Tax=Eubacterium s... 271 8e-72 UniRef50_Q4FTL1 Recombination protein recR n=3 Tax=Gammaproteoba... 271 1e-71 UniRef50_B4D3F8 Recombination protein RecR n=1 Tax=Chthoniobacte... 271 1e-71 UniRef50_C7RH59 Recombination protein RecR n=2 Tax=Anaerococcus ... 271 1e-71 UniRef50_B1GZS8 Recombination protein recR n=1 Tax=uncultured Te... 270 2e-71 UniRef50_UPI0000E87F50 recombination protein RecR n=1 Tax=Methyl... 270 2e-71 UniRef50_A1BFN2 Recombination protein recR n=17 Tax=Bacteria Rep... 270 2e-71 UniRef50_B5YKY1 Recombination protein RecR n=1 Tax=Thermodesulfo... 270 2e-71 UniRef50_D0LUK9 Recombination protein RecR n=3 Tax=Bacteria RepI... 269 5e-71 UniRef50_C2CG29 Recombination protein RecR n=4 Tax=Clostridiales... 268 7e-71 UniRef50_Q12B97 Recombination protein recR n=671 Tax=Proteobacte... 268 7e-71 UniRef50_Q6MAF1 Recombination protein recR n=1 Tax=Candidatus Pr... 267 1e-70 UniRef50_Q115W2 DNA replication and repair protein RecR n=5 Tax=... 266 3e-70 UniRef50_C7M1M5 Recombination protein RecR n=1 Tax=Acidimicrobiu... 266 3e-70 UniRef50_D1R5I7 Putative uncharacterized protein n=1 Tax=Parachl... 265 6e-70 UniRef50_B2KES1 Recombination protein RecR n=1 Tax=Elusimicrobiu... 265 6e-70 UniRef50_D1VUH0 Recombination protein RecR n=1 Tax=Peptoniphilus... 265 8e-70 UniRef50_C8PX50 Recombination protein RecR n=1 Tax=Enhydrobacter... 264 8e-70 UniRef50_Q5ZRX0 Recombination protein recR n=10 Tax=Gammaproteob... 264 1e-69 UniRef50_A6LBX7 Recombination protein recR n=84 Tax=cellular org... 263 3e-69 UniRef50_D1B5E4 Recombination protein RecR n=1 Tax=Thermanaerovi... 262 5e-69 UniRef50_A9HZ10 Recombination protein recR n=9 Tax=Burkholderial... 262 5e-69 UniRef50_Q1Q3A9 Strongly similar to recombination protein RecR n... 262 6e-69 UniRef50_Q04NX9 Recombination protein recR n=6 Tax=Leptospira Re... 262 6e-69 UniRef50_C0QUF6 Recombination protein RecR n=4 Tax=Aquificales R... 261 1e-68 UniRef50_Q7UQ68 Recombination protein recR n=3 Tax=Planctomyceta... 260 2e-68 UniRef50_O83969 Recombination protein recR n=3 Tax=Treponema Rep... 259 3e-68 UniRef50_B0VGB5 Recombination protein RecR n=1 Tax=Candidatus Cl... 259 3e-68 UniRef50_A3ZPF3 Recombinant protein RecR n=3 Tax=Planctomycetace... 259 4e-68 UniRef50_D2MMY3 Recombination protein RecR n=1 Tax=Bulleidia ext... 259 5e-68 UniRef50_C7N9F2 Recombination protein RecR n=6 Tax=Fusobacteriac... 259 6e-68 UniRef50_A6DLE7 Recombination protein RecR n=1 Tax=Lentisphaera ... 258 6e-68 UniRef50_A4QAN3 Recombination protein recR n=14 Tax=Corynebacter... 258 7e-68 UniRef50_C6HVG6 Recombination protein RecR n=1 Tax=Leptospirillu... 258 1e-67 UniRef50_C9RQ73 Recombination protein RecR n=1 Tax=Fibrobacter s... 257 2e-67 UniRef50_Q0B0W3 Recombination protein recR n=1 Tax=Syntrophomona... 256 4e-67 UniRef50_B2UKM6 Recombination protein RecR n=1 Tax=Akkermansia m... 254 9e-67 UniRef50_B0S0K8 Recombination protein recR n=2 Tax=Finegoldia ma... 254 9e-67 UniRef50_Q0EXX1 Recombination protein RecR n=1 Tax=Mariprofundus... 254 1e-66 UniRef50_Q4JSL5 Recombination protein recR n=8 Tax=Corynebacteri... 254 2e-66 UniRef50_A9NE31 Recombination DNA repair protein n=1 Tax=Acholep... 253 2e-66 UniRef50_B3DWR4 Recombinational DNA repair protein RecR n=1 Tax=... 253 3e-66 UniRef50_C8P1Z7 Recombination protein RecR n=1 Tax=Erysipelothri... 252 4e-66 UniRef50_A5EY33 Recombination protein recR n=2 Tax=Gammaproteoba... 252 6e-66 UniRef50_UPI00016B25D7 recombination protein RecR n=1 Tax=candid... 251 1e-65 UniRef50_C1TMJ9 Recombination protein RecR n=3 Tax=Synergistacea... 248 9e-65 UniRef50_UPI000174441B recombination protein RecR n=1 Tax=Verruc... 245 7e-64 UniRef50_B5Y7S4 Recombination protein RecR n=1 Tax=Coprothermoba... 245 7e-64 UniRef50_Q73FZ1 Recombination protein recR n=14 Tax=Rickettsiale... 245 8e-64 UniRef50_C0QZV8 Recombination protein recR n=1 Tax=Brachyspira h... 244 2e-63 UniRef50_D0RR34 Recombination protein RecR n=1 Tax=alpha proteob... 243 3e-63 UniRef50_C1QBW2 Recombination protein RecR n=1 Tax=Brachyspira m... 243 4e-63 UniRef50_Q5PB75 Recombination protein recR n=5 Tax=Anaplasma Rep... 243 4e-63 UniRef50_B2S0G5 Recombination protein RecR n=4 Tax=Borrelia RepI... 242 5e-63 UniRef50_B7CCG8 Putative uncharacterized protein n=1 Tax=Eubacte... 240 2e-62 UniRef50_B1ZW44 Recombination protein RecR n=3 Tax=Verrucomicrob... 239 5e-62 UniRef50_A9GQA8 DNA repair and genetic recombination protein n=2... 237 2e-61 UniRef50_B0TY95 Recombination protein recR n=18 Tax=Francisella ... 236 3e-61 UniRef50_D1NBH0 Recombination protein RecR n=1 Tax=Victivallis v... 236 3e-61 UniRef50_B3R068 Recombination protein recR n=1 Tax=Candidatus Ph... 234 9e-61 UniRef50_B8DQU5 Recombination protein recR n=13 Tax=Desulfovibri... 234 1e-60 UniRef50_Q0BVJ5 Recombination protein recR n=184 Tax=Bacteria Re... 233 3e-60 UniRef50_O67455 Recombination protein recR n=3 Tax=Aquificales R... 231 8e-60 UniRef50_Q3KMC2 Recombination protein recR n=12 Tax=Chlamydiacea... 231 1e-59 UniRef50_Q4FNA8 Recombination protein recR n=5 Tax=root RepID=RE... 231 1e-59 UniRef50_Q1MPV5 Recombinational DNA repair protein (RecF pathway... 231 1e-59 UniRef50_A5CCA2 Recombination protein recR n=17 Tax=Rickettsieae... 226 5e-58 UniRef50_B1AI75 Recombination protein recR n=15 Tax=Ureaplasma R... 224 1e-57 UniRef50_D0W4J6 Recombination protein RecR n=3 Tax=Neisseriaceae... 223 3e-57 UniRef50_A4BJR1 Recombination protein RecR n=1 Tax=Reinekea blan... 221 9e-57 UniRef50_Q7NAN7 RecR n=2 Tax=Mycoplasma gallisepticum RepID=Q7NA... 214 2e-54 UniRef50_B9L9M2 Recombination protein RecR n=1 Tax=Nautilia prof... 212 7e-54 UniRef50_B4U725 Recombination protein RecR n=1 Tax=Hydrogenobacu... 210 3e-53 UniRef50_C8PFQ8 Recombination protein RecR n=1 Tax=Campylobacter... 210 3e-53 UniRef50_Q98RF8 Recombination protein recR n=1 Tax=Mycoplasma pu... 209 4e-53 UniRef50_Q2STA5 DNA repair protein RecM n=5 Tax=Mollicutes RepID... 209 5e-53 UniRef50_C4XFW1 Putative uncharacterized protein n=1 Tax=Mycopla... 208 1e-52 UniRef50_C3XMA4 Recombination protein RecR n=3 Tax=Helicobacter ... 208 1e-52 UniRef50_A1W0P8 Recombination protein recR n=21 Tax=Epsilonprote... 206 3e-52 UniRef50_Q17WX2 Recombination protein recR n=17 Tax=Helicobacter... 204 2e-51 UniRef50_Q8EUW2 Recombinational DNA repair protein RecR n=1 Tax=... 203 2e-51 UniRef50_A8EUC6 Recombination protein RecR n=6 Tax=Campylobacter... 202 5e-51 UniRef50_Q6KIL5 Recombination protein n=1 Tax=Mycoplasma mobile ... 202 7e-51 UniRef50_Q30R19 DNA replication and repair protein RecR n=4 Tax=... 201 2e-50 UniRef50_A5IZC7 Recombination protein RecR n=1 Tax=Mycoplasma ag... 200 2e-50 UniRef50_Q4A6Z7 Putative recombination protein n=1 Tax=Mycoplasm... 197 1e-49 UniRef50_Q4A8A7 Recombination protein recR n=4 Tax=Mycoplasma Re... 192 8e-48 UniRef50_B3PM36 Recombination protein RecR n=1 Tax=Mycoplasma ar... 191 1e-47 UniRef50_Q14QH4 Putative recombination protein recr dna repair n... 191 2e-47 UniRef50_D1J7N4 Recombination protein recR n=1 Tax=Mycoplasma ho... 182 5e-45 UniRef50_B1VIS4 Recombination protein n=1 Tax=Corynebacterium ur... 171 2e-41 UniRef50_Q8R979 Topoisomerase n=14 Tax=Bacteria RepID=RGYR_THETN 71 2e-11 UniRef50_A9FRC6 DNA topoisomerase I n=1 Tax=Sorangium cellulosum... 49 9e-05 UniRef50_Q08SU2 Recombination protein RecR (Fragment) n=1 Tax=St... 49 1e-04 Sequences not found previously or not previously below threshold: UniRef50_B9MRC8 Reverse gyrase n=1 Tax=Anaerocellum thermophilum... 54 2e-06 UniRef50_A4XJT7 Reverse gyrase n=1 Tax=Caldicellulosiruptor sacc... 52 9e-06 UniRef50_A3DN56 Reverse gyrase n=2 Tax=Archaea RepID=A3DN56_STAMF 49 1e-04 UniRef50_D0LR99 DNA topoisomerase n=169 Tax=cellular organisms R... 49 1e-04 UniRef50_Q3A7H8 DNA topoisomerase n=13 Tax=Bacteria RepID=Q3A7H8... 47 3e-04 UniRef50_B8D628 Reverse gyrase n=1 Tax=Desulfurococcus kamchatke... 47 3e-04 UniRef50_B8E2F6 DNA topoisomerase n=1 Tax=Dictyoglomus turgidum ... 46 0.001 UniRef50_Q9JN65 DNA topoisomerase 1 n=2 Tax=Mycoplasma gallisept... 45 0.001 UniRef50_A8A9U6 Reverse gyrase n=3 Tax=Archaea RepID=A8A9U6_IGNH4 45 0.001 UniRef50_Q3SMS7 DNA topoisomerase n=8 Tax=Proteobacteria RepID=Q... 45 0.001 UniRef50_Q9X3X7 DNA topoisomerase 1 n=7 Tax=cellular organisms R... 45 0.001 UniRef50_B7IEV8 Reverse gyrase n=1 Tax=Thermosipho africanus TCF... 45 0.002 UniRef50_B5YFC7 DNA topoisomerase n=1 Tax=Dictyoglomus thermophi... 45 0.002 UniRef50_Q6F598 Pko r-Gyr intein n=16 Tax=cellular organisms Rep... 45 0.002 UniRef50_B3PMD8 DNA topoisomerase I n=3 Tax=Mycoplasma RepID=B3P... 45 0.002 UniRef50_B1VAJ5 DNA topoisomerase n=6 Tax=Acholeplasmataceae Rep... 44 0.003 UniRef50_A4YIX2 Reverse gyrase n=2 Tax=cellular organisms RepID=... 43 0.004 UniRef50_Q87AQ6 DNA topoisomerase 1 n=26 Tax=Gammaproteobacteria... 43 0.006 UniRef50_Q74MA4 Reverse gyrase n=1 Tax=Nanoarchaeum equitans Rep... 43 0.006 UniRef50_Q2LT40 DNA topoisomerase n=2 Tax=Bacteria RepID=Q2LT40_... 43 0.006 UniRef50_Q9YC75 Topoisomerase n=4 Tax=Archaea RepID=RGYR2_AERPE 43 0.007 UniRef50_B9L0B0 DNA topoisomerase n=1 Tax=Thermomicrobium roseum... 43 0.007 UniRef50_Q67PC7 DNA topoisomerase n=3 Tax=Bacteria RepID=Q67PC7_... 42 0.010 UniRef50_D1C7I9 DNA topoisomerase n=8 Tax=Bacteria RepID=D1C7I9_... 42 0.012 UniRef50_A6Q5V5 Reverse gyrase n=30 Tax=cellular organisms RepID... 42 0.014 UniRef50_B1GYR4 DNA topoisomerase n=1 Tax=uncultured Termite gro... 42 0.014 UniRef50_Q3M6J7 DNA topoisomerase n=12 Tax=Cyanobacteria RepID=Q... 42 0.015 UniRef50_Q4QCK3 DNA topoisomerase 1A n=6 Tax=Trypanosomatidae Re... 42 0.015 UniRef50_B5YKX8 DNA topoisomerase n=1 Tax=Thermodesulfovibrio ye... 42 0.016 UniRef50_C1E9E3 DNA topoisomerase n=1 Tax=Micromonas sp. RCC299 ... 42 0.016 UniRef50_A2BLB8 Reverse gyrase n=2 Tax=Hyperthermus butylicus Re... 41 0.023 UniRef50_Q1UZD4 DNA topoisomerase n=4 Tax=Bacteria RepID=Q1UZD4_... 41 0.024 UniRef50_C1MSJ2 DNA topoisomerase n=1 Tax=Micromonas pusilla CCM... 41 0.029 UniRef50_C1D174 DNA topoisomerase n=34 Tax=cellular organisms Re... 41 0.031 UniRef50_C5CFS3 Holliday junction ATP-dependent DNA helicase ruv... 40 0.033 UniRef50_O58530 Pho r-Gyr intein n=3 Tax=Pyrococcus RepID=RGYR_P... 40 0.037 UniRef50_A8ZW15 DNA topoisomerase n=3 Tax=Desulfobacteraceae Rep... 40 0.039 UniRef50_B3EPW7 DNA topoisomerase n=12 Tax=Chlorobiaceae RepID=B... 40 0.040 UniRef50_B1M0P4 DNA topoisomerase n=14 Tax=Alphaproteobacteria R... 40 0.040 UniRef50_Q4DQ13 DNA topoisomerase IA, putative n=3 Tax=Trypanoso... 40 0.051 UniRef50_A1U7T2 DNA topoisomerase I n=2 Tax=Marinobacter RepID=A... 40 0.051 UniRef50_C9LM02 DNA topoisomerase n=1 Tax=Dialister invisus DSM ... 40 0.051 UniRef50_D0KVS8 DNA topoisomerase n=6 Tax=Gammaproteobacteria Re... 40 0.054 UniRef50_B7I2H2 DNA topoisomerase n=4 Tax=Proteobacteria RepID=B... 40 0.066 UniRef50_P73810 DNA topoisomerase 1 n=13 Tax=cellular organisms ... 39 0.070 UniRef50_UPI00016C444E DNA topoisomerase I n=1 Tax=Gemmata obscu... 39 0.074 UniRef50_Q8CS09 DNA topoisomerase n=2 Tax=Staphylococcaceae RepI... 39 0.074 UniRef50_D1BMP2 DNA topoisomerase n=6 Tax=Firmicutes RepID=D1BMP... 39 0.075 UniRef50_C5NYW8 DNA topoisomerase n=1 Tax=Gemella haemolysans AT... 39 0.075 UniRef50_D1U7W1 DNA topoisomerase n=1 Tax=Desulfovibrio aespoeen... 39 0.077 UniRef50_B0MRI8 DNA topoisomerase n=1 Tax=Eubacterium siraeum DS... 39 0.077 UniRef50_Q04TE1 DNA topoisomerase n=4 Tax=Leptospira RepID=Q04TE... 39 0.087 UniRef50_C9LSJ2 DNA topoisomerase n=3 Tax=Veillonellaceae RepID=... 39 0.087 UniRef50_C9R890 Reverse gyrase n=1 Tax=Ammonifex degensii KC4 Re... 39 0.093 >UniRef50_C9KLD0 Recombination protein RecR n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLD0_9FIRM Length = 198 Score = 305 bits (782), Expect = 6e-82, Method: Composition-based stats. Identities = 88/199 (44%), Positives = 125/199 (62%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ L L+E R LPG+G K+A R+A+ +L D + LA A+ A +IG+C C Sbjct: 1 MQYIAPLANLIEHFRALPGIGQKTAVRLAYHVLDMDPAQARALASAIIDAKEKIGYCNTC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 ++Q C IC++ R ++ ICVVE P D+ A+E+ + G Y VL G LSPL+GIGP Sbjct: 61 FNLSDQNPCAICASDER-DHSVICVVEQPQDVAAMERMRDYQGVYHVLHGALSPLEGIGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 DI + L RL ++ + EVI+ATNP VEGEAT YIA+L ++ +RIAHG+P+GG+ Sbjct: 120 SDIRIKELLGRLQDDTVKEVIMATNPNVEGEATTMYIAKLLKPLGIKVTRIAHGLPIGGD 179 Query: 181 LEMVDGTTLSHSLAGRHKI 199 LE D TL+ ++ R +I Sbjct: 180 LEYADEVTLAKAMENRREI 198 >UniRef50_B1YGD0 Recombination protein recR n=96 Tax=Bacteria RepID=RECR_EXIS2 Length = 199 Score = 298 bits (765), Expect = 6e-80, Method: Composition-based stats. Identities = 83/200 (41%), Positives = 127/200 (63%), Gaps = 2/200 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ +++L+E+ LPG+GPK+A R+AF +L + + +AL A +I +C+ C Sbjct: 1 MQYPEAISRLIESFTKLPGIGPKTAVRLAFHVLDMEEDDVLMFGKALVSAKRDISYCSIC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T+++ C +CS+ R +CVV+ D+ A+E+ + G Y VL G +SP++GIGP Sbjct: 61 GNITDKDPCYVCSDKHRN-RTIVCVVQDSRDVIAMEKMRDYQGLYHVLHGAISPMEGIGP 119 Query: 121 DDIGLDRLEQRLA-EEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 +DI + L RL +E ITE+ILATNP +EGEATA Y++ L + +RIAHG+PVGG Sbjct: 120 EDINVSSLLTRLQADEAITEIILATNPNIEGEATAMYLSRLLKPTGIRVTRIAHGLPVGG 179 Query: 180 ELEMVDGTTLSHSLAGRHKI 199 +LE D TLS ++ GR ++ Sbjct: 180 DLEYADEVTLSRAMEGRREL 199 >UniRef50_P74533 Recombination protein recR n=254 Tax=cellular organisms RepID=RECR_SYNY3 Length = 232 Score = 298 bits (763), Expect = 1e-79, Method: Composition-based stats. Identities = 87/197 (44%), Positives = 130/197 (65%), Gaps = 2/197 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 +P L +L+E L+ LP VGPK+AQR+A LL+R + LAQAL A +G C C Sbjct: 38 YTPPLARLIEQLQRLPSVGPKTAQRLALHLLKRPDAEVENLAQALLDAKKRVGQCQVCFH 97 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 + + VC+IC +P+R +N ICVV P D+ A+E+T +F G+Y VL G +SP+DGIGP+ Sbjct: 98 LSAEPVCDICRHPQR-DNSVICVVSDPRDVIALEKTREFRGKYHVLGGVISPMDGIGPEQ 156 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + + L R+++ +I EVILA +P+VEGE T Y+ +L + + +RIA G+P+GG+LE Sbjct: 157 LTIQPLLHRVSQPEIKEVILAISPSVEGETTTLYLGKLLQPF-TKVTRIAFGLPMGGDLE 215 Query: 183 MVDGTTLSHSLAGRHKI 199 D TL+ +L GR ++ Sbjct: 216 YADEVTLARALEGRREL 232 >UniRef50_Q1IY76 Recombination protein recR n=172 Tax=Bacteria RepID=RECR_DEIGD Length = 222 Score = 295 bits (756), Expect = 6e-79, Method: Composition-based stats. Identities = 90/199 (45%), Positives = 125/199 (62%), Gaps = 3/199 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ P L L+ L LPG+GPKSAQR+AF L ++ R RLA A+ A ++ C C Sbjct: 1 MKYPPSLVGLIRELSRLPGIGPKSAQRLAFYLFEQPREDIERLAGAILEAKRDLHTCPVC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T+ E C++CS+P R ++ ICVVE P D+ AIE++G++ G Y VL G LSP++G+GP Sbjct: 61 FNITDAERCDVCSDPTRDQS-VICVVEEPGDVIAIERSGEYRGLYHVLHGALSPMNGVGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 D + + L R+ + EVILAT TVEG+ATA Y+ L SRIA+G+PVGG Sbjct: 120 DRLQIRPLLPRVQDG--MEVILATGTTVEGDATALYLQRLLEPLGAVVSRIAYGLPVGGA 177 Query: 181 LEMVDGTTLSHSLAGRHKI 199 LE D TL +L+GR ++ Sbjct: 178 LEYADEVTLGRALSGRRRV 196 >UniRef50_Q3A7K8 Recombination protein recR n=8 Tax=Bacteria RepID=RECR_PELCD Length = 199 Score = 295 bits (755), Expect = 8e-79, Method: Composition-based stats. Identities = 82/199 (41%), Positives = 127/199 (63%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 ++ +P +L+ LPG+G K+A R+ +L++ + L +A+ C+ C Sbjct: 2 VKFTPSFNRLVGEFAKLPGIGRKTAVRLTLFMLRQTSQDALALGEAVRELKERTRFCSRC 61 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 FTE++ C +C++ R + ICVVE P D+ AIE++ F GRY VL G LSPLDGIGP Sbjct: 62 FYFTEEDPCPLCTDVGRDD-QLICVVEEPQDVIAIERSRSFRGRYHVLHGSLSPLDGIGP 120 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 DD+ +D L +RL + + EV+LATN VEGEATA Y+A++ + V+ +R+AHG+P G + Sbjct: 121 DDLKIDALLERLQQNNVKEVLLATNFDVEGEATALYLAKVIQPFGVKVTRLAHGIPTGSD 180 Query: 181 LEMVDGTTLSHSLAGRHKI 199 LE VD T++H++ GR ++ Sbjct: 181 LEYVDEATVNHAVEGRREL 199 >UniRef50_B2TR53 Recombination protein recR n=5 Tax=Firmicutes RepID=RECR_CLOBB Length = 198 Score = 293 bits (750), Expect = 3e-78, Method: Composition-based stats. Identities = 88/197 (44%), Positives = 122/197 (61%), Gaps = 2/197 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 + +L+E LP +G K+AQR+A +L A AL +A I +C+ C Sbjct: 4 YPVAIEKLIEEFAKLPSIGKKTAQRLALHILNLPNDEVREFATALVKARGTIKYCSTCGN 63 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 FT+ + C +CSNP R ++ ICVVE P DI +E+ +F+G Y VL G++SP+ G GP D Sbjct: 64 FTDTDPCALCSNPNRDKS-TICVVEQPKDIMTMEKVKEFNGLYHVLHGNISPMQGRGPQD 122 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 I + L R+ E+ EVILATNP +EGEATA YIA++ DV+ +RIA G+PVGG+LE Sbjct: 123 IKIRELVARM-NEEAKEVILATNPNIEGEATAMYIAKVLKPLDVKVTRIAAGIPVGGDLE 181 Query: 183 MVDGTTLSHSLAGRHKI 199 D TLS +L GR +I Sbjct: 182 YADEVTLSKALEGRKEI 198 >UniRef50_Q38YT8 Recombination protein recR n=11 Tax=Bacteria RepID=RECR_LACSS Length = 198 Score = 291 bits (746), Expect = 8e-78, Method: Composition-based stats. Identities = 76/199 (38%), Positives = 117/199 (58%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ + +L+E+ LPG+G K+A R+AF + + A+ L A ++ +C+ C Sbjct: 1 MQYPEPIAKLIESYMKLPGIGNKTATRLAFYTIDMNEDDVTNFAKNLISARRDLHYCSVC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T+++ C IC + R + I VVE P D+ ++E+ + G Y VL G LSP++G GP Sbjct: 61 GNITDEDPCEICRDTARSQ-EMILVVEQPKDVMSMERMNDYHGLYHVLHGVLSPIEGKGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 DDI + L +RL + EVI+ATN T EGEATA YI+ L ++ +R+AHG+ VG + Sbjct: 120 DDINIANLIKRLQKTPAKEVIIATNATPEGEATAMYISRLIKPAGIKVTRLAHGLAVGSD 179 Query: 181 LEMVDGTTLSHSLAGRHKI 199 +E D TL ++ GR +I Sbjct: 180 IEYADEMTLLKAVEGRQEI 198 >UniRef50_D2NPN6 Recombinational DNA repair protein n=8 Tax=Bacteria RepID=D2NPN6_9MICC Length = 384 Score = 289 bits (740), Expect = 4e-77, Method: Composition-based stats. Identities = 86/197 (43%), Positives = 124/197 (62%), Gaps = 1/197 (0%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 + L++ L LPGVGPKSAQR+AF +L D + RLA A++ + + C +C Sbjct: 2 YEGAVQNLIDELGRLPGVGPKSAQRIAFHILNADAADMARLANAISTVKTSVSFCEECGN 61 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 +E ++C IC + RR + +CVVE D+ AIE+T F+GRY VL G ++PL G+GP+ Sbjct: 62 VSETKLCTICRDERRDPS-VLCVVEESKDVVAIERTRSFTGRYHVLGGAINPLAGVGPEQ 120 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + + L RLA+E+I E+ILA +P +EGEATA Y++ + V SR+A G+PVGG+LE Sbjct: 121 LRIRELVSRLADERIQEIILAMDPNLEGEATATYLSRMLVPLGVRLSRLASGLPVGGDLE 180 Query: 183 MVDGTTLSHSLAGRHKI 199 D TL +L GR I Sbjct: 181 YADEITLGRALEGRRVI 197 >UniRef50_Q045U7 Recombination protein recR n=130 Tax=Firmicutes RepID=RECR_LACGA Length = 199 Score = 288 bits (738), Expect = 8e-77, Method: Composition-based stats. Identities = 71/200 (35%), Positives = 116/200 (58%), Gaps = 2/200 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ + +L++ LPG+G K+A R+AF + +++L + + C+ C Sbjct: 1 MQYPLPIARLIDNYMKLPGIGEKTATRLAFYTMDMPEDDVEDFSKSLIQVKENLHSCSIC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 TE + C IC + R + I VVE P D+ A E+ G+++G Y VL G LSP+DG+GP Sbjct: 61 GNITESDPCEICRDANR-DRSTIMVVEQPKDVMAFEEMGEYNGLYHVLHGVLSPMDGVGP 119 Query: 121 DDIGLDRLEQRL-AEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 ++I + L RL ++++ EVILA N + EGEATA Y+A+L ++ +R+A G+ VG Sbjct: 120 EEINIKSLITRLQKQDEVKEVILALNSSPEGEATAMYLAKLIKPAGLKVTRLAAGLAVGS 179 Query: 180 ELEMVDGTTLSHSLAGRHKI 199 ++E + TL ++ GR + Sbjct: 180 DIEYANSITLKRAVQGRTDL 199 >UniRef50_C4K7W2 Recombination protein recR n=48 Tax=Bacteria RepID=RECR_HAMD5 Length = 202 Score = 283 bits (724), Expect = 3e-75, Method: Composition-based stats. Identities = 145/201 (72%), Positives = 168/201 (83%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQTS ++ LME+LR LPGVGPKSAQRMAF LLQ DRS G+RLA++L +AMSEIGHC C Sbjct: 1 MQTSLVIEALMESLRHLPGVGPKSAQRMAFYLLQSDRSKGIRLAESLLKAMSEIGHCGVC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 RTFTEQ C+ICSN R++ GQICVVESP+DI AIEQTGQFSGRYFVLMG LSPLDGIGP Sbjct: 61 RTFTEQPCCDICSNVYREKMGQICVVESPSDICAIEQTGQFSGRYFVLMGRLSPLDGIGP 120 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 DDIGL LE RL+ E I EVILA NPTVEGEAT+NYIA++C +Y + ++IAHGVP+GG+ Sbjct: 121 DDIGLPLLEHRLSTEPIKEVILAMNPTVEGEATSNYIAQMCEEYGISTTKIAHGVPIGGD 180 Query: 181 LEMVDGTTLSHSLAGRHKIRF 201 LEMVD TTLSH+L GR + F Sbjct: 181 LEMVDETTLSHALVGRRPMNF 201 >UniRef50_C2D9P1 Recombination protein RecR n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9P1_9ACTN Length = 200 Score = 279 bits (715), Expect = 3e-74, Method: Composition-based stats. Identities = 80/195 (41%), Positives = 121/195 (62%), Gaps = 1/195 (0%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 L +++ LPG+GPKSAQR+A+ L++ D RL++A+ + C C + Sbjct: 7 QALQFVLDEFGRLPGIGPKSAQRIAYFLMEADDETARRLSRAILNLKEHVHFCPVCFAYA 66 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 +VC +C++ R + ++CVV P DI +IE+TG + G Y VL G +SP+D IGP+ + Sbjct: 67 TDDVCALCNDSTR-DVSKVCVVCEPRDIASIEKTGVYHGLYHVLGGVISPMDKIGPEQLH 125 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 + L RLA ++I EVILA NPTVEGE TA Y+A ++ +R+A G+PVGG+LE V Sbjct: 126 VKELLARLAGDEIKEVILAMNPTVEGETTATYLARTIKTLGIQTTRLASGLPVGGDLEYV 185 Query: 185 DGTTLSHSLAGRHKI 199 D TL ++ RH++ Sbjct: 186 DEVTLGRAIEARHEM 200 >UniRef50_A0L8F5 Recombination protein recR n=5 Tax=Proteobacteria RepID=RECR_MAGSM Length = 200 Score = 279 bits (715), Expect = 3e-74, Method: Composition-based stats. Identities = 89/195 (45%), Positives = 122/195 (62%), Gaps = 1/195 (0%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 P L + +E LPGVG KSAQRM + LL+ L Q L I C C Sbjct: 6 PTLERSIELFSRLPGVGRKSAQRMVYHLLKEGGREATLLGQGLLALSERIHFCEVCHNLA 65 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 E+ +C IC + +R ++G ICVVE P D+ A+E+ G + G Y VL G LSP+DGIGPD + Sbjct: 66 EEGLCAICQDSKR-DHGLICVVEEPVDVLAMERAGAYRGLYHVLGGRLSPMDGIGPDALY 124 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 LD L +RL + + E+I+ATNPTV GEATA+YI +L ++ SR+A+G+P+GGELE + Sbjct: 125 LDALLERLQQGGVRELIIATNPTVAGEATAHYITQLAQPLTIDISRLAYGMPMGGELEYL 184 Query: 185 DGTTLSHSLAGRHKI 199 D +TL +L GR + Sbjct: 185 DESTLFQALQGRRGV 199 >UniRef50_Q03ZG8 Recombination protein recR n=31 Tax=Firmicutes RepID=RECR_LEUMM Length = 201 Score = 278 bits (713), Expect = 5e-74, Method: Composition-based stats. Identities = 76/202 (37%), Positives = 117/202 (57%), Gaps = 4/202 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ + +L+++ LPG+GPK+A R+AF L + ++AL A +++ C+ C Sbjct: 1 MQYPEPIAKLIDSYTKLPGIGPKTATRLAFYTLGMNEEDVQDFSKALISAKTDLTFCSIC 60 Query: 61 RTFT--EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGI 118 T + + C IC + R ++ VVE+ D+ A+E T + G Y VL G +SP G Sbjct: 61 GNITATDTDPCVICRDQSRDQSTVF-VVENSRDVMAMENTRDYHGLYHVLNGVISPSAGT 119 Query: 119 GPDDIGLDRLEQRLAE-EKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPV 177 GP+DI L L +RL+E E+I EVI+ TN EGEATA Y+A L + +R+AHG+ V Sbjct: 120 GPEDINLPSLIRRLSEHEEIKEVIVGTNANAEGEATAMYLARLLKPAGIAVTRLAHGLAV 179 Query: 178 GGELEMVDGTTLSHSLAGRHKI 199 G +++ D TL ++ GR K+ Sbjct: 180 GSDIDYADELTLIKAVQGRTKL 201 >UniRef50_A5FRM7 Recombination protein recR n=22 Tax=Bacteria RepID=RECR_DEHSB Length = 204 Score = 278 bits (712), Expect = 7e-74, Method: Composition-based stats. Identities = 79/193 (40%), Positives = 117/193 (60%), Gaps = 1/193 (0%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 + +L+++L LPG+GPKSAQR+AF L++ + L+ + ++I C C + Sbjct: 13 VNKLIDSLGKLPGIGPKSAQRLAFYLMRAPEDQVISLSDTIRNIKNQISQCRICCNVADS 72 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 E+C IC N +R+ +ICVVE P DI A+E G + G Y VL G +SP +GI +I ++ Sbjct: 73 ELCPICQNTKRE-TNKICVVEQPQDILALEHVGVYRGYYHVLHGAISPTEGITSQNIRIN 131 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 L RL ++ E+ILATNPT EGEATA Y++ L ++ +R+A G+P G ELE D Sbjct: 132 ELMVRLDNGQVEEIILATNPTTEGEATAMYLSRLITPLGIKVTRLARGLPFGTELEYADD 191 Query: 187 TTLSHSLAGRHKI 199 TLS ++ GR Sbjct: 192 VTLSRAMEGRQNF 204 >UniRef50_C3RP48 Recombination protein recR n=6 Tax=Bacteria RepID=C3RP48_9MOLU Length = 197 Score = 278 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 122/199 (61%), Gaps = 2/199 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M L++ + LPG+G KSA+R+A+ +L D+ + A+ ++I +C C Sbjct: 1 MNYPQAFQDLVDCFKRLPGIGGKSAERLAYHVLSMDKKYVDEFSAAIGSIQTKIHYCKKC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 E E+C+IC +P R + IC+VE P D++A+E+ ++ G Y VL G +S +DG Sbjct: 61 GHICEGEICDICQDPDRDQT-TICIVEDPKDVFAMEKVKEYHGLYHVLHGAMSIMDGKTM 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 DD+ + L +RL ++ I EVI+ATNPT +GE TA Y+A+L ++ ++ SRIA+G+P+G Sbjct: 120 DDLNIASLFERL-DDSIKEVIIATNPTRDGETTALYLAKLLSKKNINTSRIANGLPIGSN 178 Query: 181 LEMVDGTTLSHSLAGRHKI 199 ++ D TL SL GR KI Sbjct: 179 IDYADELTLLKSLEGRKKI 197 >UniRef50_Q2LYF5 Recombination protein recR n=3 Tax=Bacteria RepID=RECR_SYNAS Length = 203 Score = 277 bits (709), Expect = 2e-73, Method: Composition-based stats. Identities = 81/197 (41%), Positives = 114/197 (57%), Gaps = 1/197 (0%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 + L+ L LPG+G K+A R+A +L+ LA ++ +I C C Sbjct: 4 YPLPIKHLISELGKLPGIGEKTATRLAMHILRAPEGDARALADSILEVRDKIRFCRVCYN 63 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 F+E E+C +C + R ++ QICVVE P + AIE +G +SG Y VL G LSPLDGIGP+ Sbjct: 64 FSEAELCTVCRDSAR-DSSQICVVEDPDALMAIEDSGSYSGTYHVLHGVLSPLDGIGPEQ 122 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + L L +R+ E + EVILATNP V G++TA I+ + V +RIA GVP+G +L Sbjct: 123 LKLRELVERIRESGVREVILATNPNVSGDSTALLISRMIGPLAVTVTRIAQGVPMGSDLR 182 Query: 183 MVDGTTLSHSLAGRHKI 199 +D TLS SL R + Sbjct: 183 YMDRMTLSKSLEFRRGM 199 >UniRef50_A7NFA0 Recombination protein recR n=7 Tax=Bacteria RepID=RECR_ROSCS Length = 205 Score = 276 bits (708), Expect = 2e-73, Method: Composition-based stats. Identities = 82/196 (41%), Positives = 117/196 (59%), Gaps = 1/196 (0%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 + +L+E L LPGVGPK+A R+ F LL+ LA AL ++ C+ C Sbjct: 11 PTPVIRLIEELSRLPGVGPKTASRLTFFLLRAPDELPRALANALIGLKQQVQLCSRCYFI 70 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 T+ ++C IC+NP R + +CVVE P D+ AIE+TG + G Y VL G ++PL+G+ +DI Sbjct: 71 TQNDLCAICANPARDQR-IVCVVEEPLDVVAIERTGVYRGLYHVLHGRIAPLEGMNREDI 129 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 D L R+ E I EVI+ATNP +EGEATA ++ A +R+A G+P GG+LE Sbjct: 130 YFDELLDRVRAEPIDEVIIATNPNLEGEATAFHLQRALAPLGARVTRLARGLPTGGDLEW 189 Query: 184 VDGTTLSHSLAGRHKI 199 D TL +L GR ++ Sbjct: 190 ADPGTLGSALEGRREM 205 >UniRef50_Q74GZ7 Recombination protein recR n=2 Tax=Deltaproteobacteria RepID=RECR_GEOSL Length = 197 Score = 276 bits (708), Expect = 2e-73, Method: Composition-based stats. Identities = 86/199 (43%), Positives = 123/199 (61%), Gaps = 3/199 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 + S L++L+ L+ LPGVG K+A R+AF LL+ + LA +L MS + C+ C Sbjct: 2 VHFSDSLSRLLAELQKLPGVGEKTALRLAFHLLKSPDN-AAALADSLRDVMSRVRFCSVC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 TE + C CS+ R + ICVVE P D+ A+E+T F GRY VL G LSPL+G+ P Sbjct: 61 FGITEDDPCRFCSD-ARDDGA-ICVVEEPQDLLAVERTRAFRGRYHVLQGALSPLNGVTP 118 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 D + + L +RL + EV++ATN TVEGEATA Y+A + V +R+AHG+P+G + Sbjct: 119 DRLRVAELMKRLEGGGVREVVIATNFTVEGEATALYLARMIKPLGVRVTRLAHGIPLGSD 178 Query: 181 LEMVDGTTLSHSLAGRHKI 199 LE VD T+ +L GR ++ Sbjct: 179 LEFVDAATVQRALEGRSEL 197 >UniRef50_B9XNI6 Recombination protein RecR n=1 Tax=bacterium Ellin514 RepID=B9XNI6_9BACT Length = 200 Score = 275 bits (704), Expect = 6e-73, Method: Composition-based stats. Identities = 93/196 (47%), Positives = 130/196 (66%), Gaps = 1/196 (0%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 +T L L LPG+GP+SA+R+A L+Q D S +LAQ L A I C C + Sbjct: 5 PEPITTLTGILSRLPGIGPRSAERLALHLVQSDVSEVKQLAQILVEARERIQTCPICGSL 64 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 TEQ C+ICS+ RR + G IC+VE P DI +IE++G F GRY VL G +SPL+G+GP+D+ Sbjct: 65 TEQTPCSICSDERR-DGGLICLVERPTDIISIEKSGTFHGRYHVLGGKISPLNGVGPEDL 123 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 + LE RL++E I E+++A VEG+AT+NY+A+ A+ + SRIAHG+P G LE Sbjct: 124 RISELESRLSQEPIKEIVVALGTDVEGDATSNYLAKKLARPGLRISRIAHGLPAGSGLEF 183 Query: 184 VDGTTLSHSLAGRHKI 199 D TL+H+LAGR ++ Sbjct: 184 ADELTLTHALAGRREM 199 >UniRef50_Q2RZH8 Recombination protein recR n=1 Tax=Salinibacter ruber DSM 13855 RepID=RECR_SALRD Length = 237 Score = 275 bits (703), Expect = 8e-73, Method: Composition-based stats. Identities = 86/234 (36%), Positives = 123/234 (52%), Gaps = 39/234 (16%) Query: 1 MQT-SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCAD 59 MQ S + L+E LP +G K+A+R+A +L+ + +A ALT ++ C+ Sbjct: 1 MQYTSESVETLVEQFTKLPTIGKKTARRLANYVLKMPQEEVETIANALTSVKEDVQRCST 60 Query: 60 CRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 C +Q+ C IC + +R + ICVVE +D+ AIEQT ++ G Y VL G +SPLDG+G Sbjct: 61 CYVVADQDPCPICGSDKR-DASTICVVEESSDLTAIEQTNEYRGVYHVLGGVISPLDGVG 119 Query: 120 PDDIGLDRLEQRL-------------------------------------AEEKITEVIL 142 PDD+ + L R+ AE + EVIL Sbjct: 120 PDDLRVHELATRIDPSFEDTAADAAPEPNTTPDGEADAEAPPSENGGADEAESGVDEVIL 179 Query: 143 ATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGR 196 A NP VEG+ TA YI++L +DV +RIA G+P+GG+LE D TLS +L GR Sbjct: 180 AVNPNVEGDTTAYYISQLLEPFDVRVTRIARGLPIGGDLEYADEATLSRALEGR 233 >UniRef50_A1HM03 Recombination protein RecR n=5 Tax=Bacteria RepID=A1HM03_9FIRM Length = 171 Score = 274 bits (702), Expect = 1e-72, Method: Composition-based stats. Identities = 80/172 (46%), Positives = 111/172 (64%), Gaps = 1/172 (0%) Query: 28 MAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQENGQICVVE 87 MA+ +L+ D+ LAQA+ A ++G+C+ C T+ + C +C R + ICVVE Sbjct: 1 MAYHVLEMDKDEAQALAQAILDAKEKVGYCSVCFNLTDCDPCQVCQAEGR-DRTVICVVE 59 Query: 88 SPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPT 147 P D+ A+E+T ++ G Y VL G LSPLDG+GPD + L L QRL + + EVI+ATNP Sbjct: 60 DPRDVEAMERTREYRGLYHVLHGALSPLDGVGPDQLRLAELLQRLRQGDVREVIMATNPN 119 Query: 148 VEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKI 199 VEGEATA YIA L V+ +RIAHG+PVGG+LE D TL+ +L R ++ Sbjct: 120 VEGEATAMYIARLLKPLGVKVTRIAHGLPVGGDLEYADEVTLAKALENRREL 171 >UniRef50_A1AKR3 Recombination protein recR n=3 Tax=Desulfuromonadales RepID=RECR_PELPD Length = 197 Score = 273 bits (700), Expect = 2e-72, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 123/196 (62%), Gaps = 3/196 (1%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 L++L+ L+ LPGVG ++A R+AF LL+ ++ L+++L S + C+ C Sbjct: 5 PSALSRLVGELKKLPGVGERTALRLAFHLLKTPQN-LTALSESLLEVKSRVRSCSICFAI 63 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 TE + C IC+ R + G ICVVE+ D+ A+E++ + G Y VL G +SPL GIGP ++ Sbjct: 64 TEDDPCAICAGDR--DTGTICVVENSQDLMALERSNAYHGTYHVLEGVISPLAGIGPSEL 121 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 + L R+ + EV++ATN TVEGEATA Y+A+L + SR+AHG+P+G ++E Sbjct: 122 RIAELLARIGRGGVDEVVIATNFTVEGEATALYLAKLLKPLGIRISRLAHGIPLGSDIEY 181 Query: 184 VDGTTLSHSLAGRHKI 199 VD T+ +L GR+++ Sbjct: 182 VDAATVQWALQGRNQL 197 >UniRef50_A5G9K4 Recombination protein recR n=2 Tax=Deltaproteobacteria RepID=RECR_GEOUR Length = 197 Score = 272 bits (697), Expect = 4e-72, Method: Composition-based stats. Identities = 83/196 (42%), Positives = 121/196 (61%), Gaps = 3/196 (1%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 S LT+L+ L+ LP VG K+A R+AF LL+ + LA++L + C+ C Sbjct: 5 SRSLTKLLGELKKLPSVGDKTALRLAFHLLKSPEN-LSALAKSLLEVRDGVRFCSTCFGI 63 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 TE + C++C+ P R + ICVVE P DI A+E++ F GRY VL G LSPL+G+ P + Sbjct: 64 TESDPCHLCTTP-RDDAS-ICVVEEPQDILAMERSQAFKGRYHVLHGALSPLNGVTPGQL 121 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 + L QRL + EV+LATN TVEGEATA Y+ L ++ +R+AHG+P+G +LE Sbjct: 122 RIAELLQRLENGSVKEVLLATNFTVEGEATALYLTRLIKPLSIKVTRLAHGIPIGSDLEY 181 Query: 184 VDGTTLSHSLAGRHKI 199 VD T+ ++ GR ++ Sbjct: 182 VDAATVQRAVEGRSEL 197 >UniRef50_A8ZU38 Recombination protein recR n=2 Tax=Desulfobacteraceae RepID=RECR_DESOH Length = 199 Score = 272 bits (697), Expect = 4e-72, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 113/197 (57%), Gaps = 1/197 (0%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 P + + L LPG+G K+A+R+A LL LA++L C+ C T Sbjct: 4 YPPSIRNAISHLSRLPGIGQKTAERLAMHLLHVPDRAVHELARSLVDLKKNTRMCSVCFT 63 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 ++ VC IC +P R +CVVE P ++ AIE+T F G Y VL G LSP+DGIGPDD Sbjct: 64 LSDTPVCAICGDPDRN-ASLLCVVEGPTEVMAIEKTAAFKGVYHVLHGVLSPMDGIGPDD 122 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 I + L R+ + + E++LAT+ VEGEATA Y+ E+ + V +RIA G+P GGE+ Sbjct: 123 IRIRELVDRVKKGIVKEIVLATDTRVEGEATAAYLVEVLKPFPVTVTRIASGMPAGGEVR 182 Query: 183 MVDGTTLSHSLAGRHKI 199 D TL +++ R+ + Sbjct: 183 YSDPVTLKNAMEKRYAL 199 >UniRef50_Q8RG96 Recombination protein recR n=12 Tax=Fusobacteriaceae RepID=RECR_FUSNN Length = 197 Score = 272 bits (696), Expect = 5e-72, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 118/196 (60%), Gaps = 1/196 (0%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 + L +L+ LPGVG KSA R AF +L + A+AL + C C + Sbjct: 3 TKSLERLILEFNKLPGVGQKSATRYAFHILNQSEEDVKNFAEALLAVKENVKKCHVCGNY 62 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 E + CNICS+ R ++ ICVVE DI +E+T +F G Y VL G L PL+GI P+++ Sbjct: 63 CESDTCNICSDNAR-DHRIICVVEESKDIMILEKTTKFRGVYHVLNGRLDPLNGITPNEL 121 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 + L +R+A++ I E+ILATNP +EGE TA Y+A+L + ++ +++A G+P+GG LE Sbjct: 122 NIKSLLERIAKDDIEEIILATNPNIEGETTAMYLAKLMKNFGIKITKLASGIPMGGNLEF 181 Query: 184 VDGTTLSHSLAGRHKI 199 D T+S +L R +I Sbjct: 182 SDTATISRALDDRIEI 197 >UniRef50_C7GZD8 Recombination protein RecR n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZD8_9FIRM Length = 198 Score = 271 bits (695), Expect = 8e-72, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 124/199 (62%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ L+ L LPG+G K+AQR+A + + + + +++A+ A++ + C C Sbjct: 1 MQFPVYFENLITELSRLPGIGRKTAQRLAIFITDMEDNKALSISRAIEEAVNNLKPCDTC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T+ C CS+P R + ICVVE+ DI A+E+ + GRY VL G +SPLDGIGP Sbjct: 61 GCLTDNGKCLFCSDPLRND-DVICVVENTIDIVAMEKLKNYRGRYHVLGGVISPLDGIGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 D + +D L R+ + + EVILAT+ T+EGEATANYIA+ + ++A+RIA G+PVGG+ Sbjct: 120 DHLRIDTLLSRVVKYDVKEVILATSVTIEGEATANYIAKELEKLGIKATRIAKGIPVGGK 179 Query: 181 LEMVDGTTLSHSLAGRHKI 199 + +D T+ +++ R ++ Sbjct: 180 FDYIDAMTMQNAIDKREEM 198 >UniRef50_Q4FTL1 Recombination protein recR n=3 Tax=Gammaproteobacteria RepID=RECR_PSYA2 Length = 197 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 95/193 (49%), Positives = 132/193 (68%), Gaps = 1/193 (0%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 + QL++ LR LPGVG KSAQRMA LL + R GM LAQAL AM +I C C +F Sbjct: 3 TAKFDQLVKQLRILPGVGQKSAQRMALHLLTKKRPQGMALAQALDEAMRDIVECQRCHSF 62 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 ++ VC +C +PRR + +CVVE+ AD+ AIEQT + GRYFVL GHLSP+DGI DD+ Sbjct: 63 SDDAVCPLCQDPRRDDA-LLCVVETAADVMAIEQTAGYRGRYFVLGGHLSPIDGISADDL 121 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 +++L R+ +E + E+ILAT TVEG+ TA++I E +++ + +R+A GVP+GGELE Sbjct: 122 NIEQLVWRVKQEPVEELILATGTTVEGQTTAHFINEAVSRHVNKVTRLAQGVPMGGELEY 181 Query: 184 VDGTTLSHSLAGR 196 +D TL ++ R Sbjct: 182 LDSMTLGQAMQNR 194 >UniRef50_B4D3F8 Recombination protein RecR n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3F8_9BACT Length = 203 Score = 271 bits (693), Expect = 1e-71, Method: Composition-based stats. Identities = 82/199 (41%), Positives = 120/199 (60%), Gaps = 1/199 (0%) Query: 2 QTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCR 61 + L+ L+ LPG+GP+SA+R+A +LQ + + +++ + I C C Sbjct: 5 AYPAAIQALIGELKRLPGIGPRSAERIALWMLQSRDARPLEVSRVIREVQESIHACPRCG 64 Query: 62 TFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 FT +C IC++ R + QICVVE P DI +E+TG F GRY L G +SPLD +GP+ Sbjct: 65 FFTTDTLCEICADTTR-DAAQICVVEQPTDILPLERTGVFLGRYHALGGRISPLDHVGPE 123 Query: 122 DIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGEL 181 ++ +D L +R+ E +E+ILA VEGEATANY+A L + V +R+A G+P GG L Sbjct: 124 ELRIDALIERIKAEAPSEIILALGSDVEGEATANYLATLLRELPVTVTRLAQGLPAGGGL 183 Query: 182 EMVDGTTLSHSLAGRHKIR 200 E D TLS +LAGR ++ Sbjct: 184 EQADELTLSRALAGRTAVK 202 >UniRef50_C7RH59 Recombination protein RecR n=2 Tax=Anaerococcus RepID=C7RH59_ANAPD Length = 201 Score = 271 bits (693), Expect = 1e-71, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 117/197 (59%), Gaps = 1/197 (0%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 L L+E + LP +G KSA+R+A +++ D +++LT I C C Sbjct: 4 YPESLQNLIEQFQKLPTIGRKSAERLAMAIVESDYKSVDDFSKSLTEVKDRIHACKICGN 63 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 TE EVC+IC + R E +C+VE ++ AIE++ + G+Y VL G +SP DG+GPD Sbjct: 64 LTEDEVCDICKDITRNE-EYLCIVEDVRNLIAIEKSHAYRGKYHVLGGLISPSDGLGPDQ 122 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + +D+L +R+ +E I EVILA + T+EGE T ++ L ++ +++ +++A G+PVG LE Sbjct: 123 LNIDKLLERIEKENIEEVILAISSTIEGETTVLFLTNLLSERNIKITKLAQGIPVGSNLE 182 Query: 183 MVDGTTLSHSLAGRHKI 199 D TL +L R +I Sbjct: 183 YFDQLTLERALEDRREI 199 >UniRef50_B1GZS8 Recombination protein recR n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=RECR_UNCTG Length = 198 Score = 270 bits (691), Expect = 2e-71, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 126/199 (63%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M + +++ ++ LPGVG K A+R+++ +L+ + RL ++ A + C+ C Sbjct: 1 MNRPRPVEKMVGIIKKLPGVGHKMAERLSYHILKMPQVEVDRLIDSIQNARRTMKCCSIC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 +E + C ICS+ R++N +CVVE+P D+ A+ + + G YFVL G LSPLD +GP Sbjct: 61 CNLSEHDPCPICSDVTREKN-IVCVVETPQDLIAVSKVEDYKGLYFVLGGALSPLDAVGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 DDI +D+L +RL + I EVI+AT+ +GE TA Y+A++ ++ +R+ +G+PVGG+ Sbjct: 120 DDIRIDKLIKRLKRDSINEVIIATDADSKGEITAVYLADIIKILGIKVTRLGYGLPVGGD 179 Query: 181 LEMVDGTTLSHSLAGRHKI 199 +E D T+S ++AGR ++ Sbjct: 180 IEYADEITISRAIAGRKEM 198 >UniRef50_UPI0000E87F50 recombination protein RecR n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87F50 Length = 198 Score = 270 bits (691), Expect = 2e-71, Method: Composition-based stats. Identities = 101/199 (50%), Positives = 144/199 (72%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ + +L L++AL+CLPGVGPKSA R+A+ LLQR+R G L+Q+++ A+ ++GHC C Sbjct: 1 MKDTEVLQSLVDALKCLPGVGPKSALRLAYYLLQRNRKGADTLSQSISNALEQLGHCKLC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 FTEQEVC ICS+ +R + IC+VE P+D+ +EQT + G YFVLMG LSPLDG+GP Sbjct: 61 NDFTEQEVCKICSSQKRDVH-TICIVEMPSDLLMMEQTHSYKGMYFVLMGRLSPLDGVGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 +I LDRL +R+ +I E+ILATN T EG ATA YI EL +++ +RIA G+P+GGE Sbjct: 120 KEIHLDRLIERIKSSEIREIILATNFTAEGNATAQYIKELLKGAEIKMTRIARGLPMGGE 179 Query: 181 LEMVDGTTLSHSLAGRHKI 199 +E +D TL+ ++ R ++ Sbjct: 180 IEYIDSGTLAQAVVERKQL 198 >UniRef50_A1BFN2 Recombination protein recR n=17 Tax=Bacteria RepID=RECR_CHLPD Length = 205 Score = 270 bits (691), Expect = 2e-71, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 123/206 (59%), Gaps = 8/206 (3%) Query: 1 MQTSP-LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCAD 59 M+ + + L++ LPG+G K+AQR+ +L R+ +LA+AL + C++ Sbjct: 1 MRYTSGAIETLIDEFARLPGIGRKTAQRLCMHMLNEPRTAAEKLAKALLDVKDRVIRCSE 60 Query: 60 CRTFTE--QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDG 117 C+ T+ + C +C + R + ICVVESP D+ A E+TG + G Y VL G +SPLDG Sbjct: 61 CQNVTDRDSDPCVLCRSSGR-DRTVICVVESPVDLLAFEKTGHYKGLYHVLHGVISPLDG 119 Query: 118 IGPDDIGLDRLEQRLAEEK----ITEVILATNPTVEGEATANYIAELCAQYDVEASRIAH 173 IGPDDI + L R++ + + EV+LA NPTVEGE T+ YI+ L + S+IA Sbjct: 120 IGPDDIKVRELLARVSRPEESLQVREVVLALNPTVEGETTSLYISRLLKPLGIAVSKIAR 179 Query: 174 GVPVGGELEMVDGTTLSHSLAGRHKI 199 G+PVG ELE +D TLS ++ GR + Sbjct: 180 GIPVGAELEFIDEATLSRAMEGRSAM 205 >UniRef50_B5YKY1 Recombination protein RecR n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKY1_THEYD Length = 197 Score = 270 bits (691), Expect = 2e-71, Method: Composition-based stats. Identities = 83/200 (41%), Positives = 127/200 (63%), Gaps = 4/200 (2%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M L L+E L LPG+G K+AQR+AF ++ + + +A+A+ + C+ C Sbjct: 1 MSNP--LENLIENLCKLPGIGRKTAQRLAFFIMNMPENEALEIAEAIINLKKKAKFCSVC 58 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 TE E CNICSN R ++ ICVVE P++I E+TG + G Y VL G++SP+DG+ P Sbjct: 59 FNITENEKCNICSNSIR-DHSIICVVEEPSNIILFEKTG-YKGVYHVLGGNISPVDGLTP 116 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 D + + LE+R+ +I EVI++T+P +GE TA +IA+L +Y+V+ SRIA+G+P+G + Sbjct: 117 DKLKIKELEERVKTGQIREVIISTSPNTKGELTAQWIADLLKKYNVKISRIAYGLPIGID 176 Query: 181 LEMVDGTTLSHSLAGRHKIR 200 +E D TLS +L GR + Sbjct: 177 IEFADEVTLSKALEGRKPVN 196 >UniRef50_D0LUK9 Recombination protein RecR n=3 Tax=Bacteria RepID=D0LUK9_HALO1 Length = 201 Score = 269 bits (688), Expect = 5e-71, Method: Composition-based stats. Identities = 87/200 (43%), Positives = 127/200 (63%), Gaps = 6/200 (3%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 + +L++ L LPG+G K+A R+AF L++ S LAQ L + + C+ C T Sbjct: 3 DPIKRLVQHLARLPGIGEKTATRLAFHLIRSPASQVKDLAQTLVEVIEQTVLCSVCANIT 62 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 + + C IC +P R+ + ICVV +P+D+ AI++ G F GR+ VL G LSPL+GIGP+D+ Sbjct: 63 QDDPCVICRDPGREASA-ICVVSNPSDVVAIDRGGHFRGRFHVLHGVLSPLEGIGPEDLR 121 Query: 125 LDRLEQRLA-----EEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 +D L +RL E +I E+I+AT+ VEGEATA Y+A L ++ SRIA G+PVGG Sbjct: 122 IDELLKRLQTPAAGEPEIDEIIVATSANVEGEATAMYLARLIKPLNIRVSRIASGIPVGG 181 Query: 180 ELEMVDGTTLSHSLAGRHKI 199 ELE D T++ +LAGR + Sbjct: 182 ELEYSDQATIARALAGRSPL 201 >UniRef50_C2CG29 Recombination protein RecR n=4 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2CG29_9FIRM Length = 201 Score = 268 bits (687), Expect = 7e-71, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 119/197 (60%), Gaps = 1/197 (0%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 L L++ + LP +G KSA+R+A +++ RD+ A++L S I C C Sbjct: 4 YPESLVNLIDEFQKLPTIGRKSAERLAMSIVDRDKDSVDEFAKSLLEVKSRIHSCEICGN 63 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 TE+++C+IC + R E +C+VE ++ AIE++ + GRY VL G +SP D IGPD Sbjct: 64 LTEEDICDICKDITRNEEC-LCIVEDVKNLIAIEKSHAYRGRYHVLGGLISPSDDIGPDK 122 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + +D+L +R+ +E I EVILA + T+EGE T+ ++ L + +V+ +++A G+PVG LE Sbjct: 123 LNVDKLLERIDKEDIKEVILAISSTIEGETTSLFLTGLLSNKNVKITKLAQGIPVGSNLE 182 Query: 183 MVDGTTLSHSLAGRHKI 199 D TL +L R +I Sbjct: 183 YFDQLTLERALEDRREI 199 >UniRef50_Q12B97 Recombination protein recR n=671 Tax=Proteobacteria RepID=RECR_POLSJ Length = 208 Score = 268 bits (687), Expect = 7e-71, Method: Composition-based stats. Identities = 108/209 (51%), Positives = 139/209 (66%), Gaps = 13/209 (6%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M S L L +ALR LPGVG KSA RMAF LLQ D+ G +++A+AL A++ + HC C Sbjct: 1 MADSNALEGLTQALRKLPGVGVKSAARMAFHLLQHDKPGALQIARALEHAVNSVRHCTLC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T TEQEVC C+NP+R + ++CVVE+PAD A+E+T + G YFVLMG LSPLDGIGP Sbjct: 61 NTLTEQEVCATCANPQR-DRSKLCVVETPADQAALERTLAYRGLYFVLMGKLSPLDGIGP 119 Query: 121 DDIGLDRLEQRL------------AEEKITEVILATNPTVEGEATANYIAELCAQYDVEA 168 +DIGL +L R+ A ++ EVILATN T EGEATA+ IA+ V+ Sbjct: 120 NDIGLQKLFDRVVPRDEHGEPLPPASREVQEVILATNFTAEGEATAHVIAQALKSRGVQV 179 Query: 169 SRIAHGVPVGGELEMVDGTTLSHSLAGRH 197 +R+A GVPVG ELE VD T++H+L R Sbjct: 180 TRLARGVPVGSELEYVDLGTIAHALVDRR 208 >UniRef50_Q6MAF1 Recombination protein recR n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=RECR_PARUW Length = 198 Score = 267 bits (684), Expect = 1e-70, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 121/199 (60%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ L +L+ L+ PGVG KSA+R AF LL + L++ + +I C +C Sbjct: 1 MRYPEHLLKLIHILKKFPGVGHKSAERFAFHLLNWPMEHLIELSETVKNTKDKIKQCLNC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T++ C C +R ++ ICV P D+++IE+T ++ G Y VL G LSPL+ GP Sbjct: 61 GCLTDEAACYFCDINQR-DSQIICVTAFPRDVFSIEETHEYRGLYHVLGGVLSPLENRGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + + + RL+ R+ + +I EV++A + T+EG+ATA ++ + A D++ SR+A G+P+G Sbjct: 120 EHLSISRLKHRIQDLQIKEVVIALDSTLEGDATALFLKQELAADDIQISRLAFGLPMGSS 179 Query: 181 LEMVDGTTLSHSLAGRHKI 199 L+ VDG TL+ +LAGR + Sbjct: 180 LDYVDGGTLARALAGRSRF 198 >UniRef50_Q115W2 DNA replication and repair protein RecR n=5 Tax=Bacteria RepID=Q115W2_TRIEI Length = 182 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 77/183 (42%), Positives = 121/183 (66%), Gaps = 2/183 (1%) Query: 17 LPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEVCNICSNPR 76 +PGVGPK+AQR+A +++R + LA+AL A +IG C C + + +C IC NP+ Sbjct: 1 MPGVGPKTAQRLALYIIKRPEAEIQALAEALVDARKKIGLCQKCFHLSAEPICEICRNPQ 60 Query: 77 RQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEK 136 R + ICVV D+ A+E+T ++ G+Y VL G +SP+DGIGP+ + + L +R+++E Sbjct: 61 RDK-EVICVVCDSRDLIALEKTREYKGQYHVLGGVISPMDGIGPEQLSIQPLVRRVSQEN 119 Query: 137 ITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGR 196 I EVI+A +P+VEGE T Y+ +L + + +RIA G+P+GG+LE D TL+ +L GR Sbjct: 120 IQEVIIAISPSVEGETTTLYVGQLLRPF-TKVTRIAFGLPMGGDLEYADELTLARALEGR 178 Query: 197 HKI 199 ++ Sbjct: 179 QEL 181 >UniRef50_C7M1M5 Recombination protein RecR n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M1M5_ACIFD Length = 205 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 92/196 (46%), Positives = 118/196 (60%), Gaps = 2/196 (1%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 P L L+E L LPG+GPKSAQR+A L+ R + RLA L A +G C C Sbjct: 5 PPTLDALIEELGRLPGIGPKSAQRIALALIVRGPAAAHRLADVLVTATERLGRCDRCGAL 64 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 E C IC +P R + VVE D++A E+ +F G Y VL G +SP+DG+GPDD+ Sbjct: 65 AEGARCPICDDPARDPRIVL-VVEGDRDVWAFERARRFRGTYHVLGGVISPMDGVGPDDL 123 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 + RL R+ E I EV++AT+PTVEGE TA Y+A + A V SR+A GVPVGGELE Sbjct: 124 AIGRLIARVEAEPIEEVVVATSPTVEGETTATYLARVLAGR-VGVSRLATGVPVGGELEY 182 Query: 184 VDGTTLSHSLAGRHKI 199 VD TL+ +L GR Sbjct: 183 VDELTLARALEGRRPF 198 >UniRef50_D1R5I7 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5I7_9CHLA Length = 200 Score = 265 bits (678), Expect = 6e-70, Method: Composition-based stats. Identities = 77/200 (38%), Positives = 118/200 (59%), Gaps = 1/200 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ L +L++ L+ LPGVG +SA+R AF L++ D L++ +I C+ C Sbjct: 1 MRYPSHLIKLIQVLKKLPGVGARSAERFAFQLMEWDEEKLREFGTILSQVPEKIQACSAC 60 Query: 61 RTFTEQ-EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 E+ C C + RQ + +CV+ SP D+++IE+T ++ G Y VL G LSPLDG G Sbjct: 61 GCLKEEAGGCPFCDDLVRQASQILCVISSPRDVFSIEETREYKGLYHVLGGLLSPLDGFG 120 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 P+ + L L+ R+ +I EV++A T+EG+ATA YI V+ SR+A+G+PVG Sbjct: 121 PERLSLASLKGRIEIHQIHEVVIALGSTLEGDATALYIKRELGTLPVQVSRLAYGLPVGS 180 Query: 180 ELEMVDGTTLSHSLAGRHKI 199 L+ VDG TL+ + +GR Sbjct: 181 SLDYVDGGTLARAFSGRASF 200 >UniRef50_B2KES1 Recombination protein RecR n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KES1_ELUMP Length = 197 Score = 265 bits (678), Expect = 6e-70, Method: Composition-based stats. Identities = 84/197 (42%), Positives = 119/197 (60%), Gaps = 3/197 (1%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 +L+ ALR LPGVGP+ A+R + L+ S AL+ I C+ C ++ Sbjct: 2 KSFDRLVRALRRLPGVGPRQAERFSAYFLKTSDSEIDEFINALSALRENIHLCSICFAYS 61 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 E VC+IC + R+ ICVVE P DI AIE+TG F G Y VL G LSP+DG G ++I Sbjct: 62 EDGVCDICEDSSRE-RDIICVVEDPQDIEAIEKTGAFKGLYHVLHGALSPIDGRGVENIK 120 Query: 125 LDRLEQRL--AEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + L +R+ ++ + EVI+AT+P EGE TA YIA+ + SRI +GVP+GG+L+ Sbjct: 121 IRELIERIHNSQTPVREVIIATDPDTEGETTALYIADALRGLVDKVSRIGYGVPLGGDLD 180 Query: 183 MVDGTTLSHSLAGRHKI 199 +D TL++SL GR K+ Sbjct: 181 YLDEMTLTYSLKGRTKL 197 >UniRef50_D1VUH0 Recombination protein RecR n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUH0_9FIRM Length = 201 Score = 265 bits (678), Expect = 8e-70, Method: Composition-based stats. Identities = 72/195 (36%), Positives = 122/195 (62%), Gaps = 2/195 (1%) Query: 6 LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTE 65 + QL+ L LPG+GPK+AQR+A+ ++ D+ LA ++ S++ C+ C ++ Sbjct: 7 PIEQLIRNLTRLPGIGPKTAQRLAYHIIDMDKVEVEELADSIGTIKSKVKKCSLCCNISD 66 Query: 66 QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGL 125 + CNIC + R ++ ICVV+ P D+ A+E+T + G Y VL G +SPL G DI Sbjct: 67 TDPCNICQDNNRDKS-TICVVQYPKDVDAMERTHTYKGLYHVLNGFISPLKGRTESDINF 125 Query: 126 DRLEQRLA-EEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 L +R+ ++I E+I+A++PTV+G+ TA+++ E +D++ +RI +G+PVGG+LE Sbjct: 126 VELIKRVENNKEIKEIIIASSPTVDGDITASFLVEALKAFDLKVTRIGYGLPVGGDLEYY 185 Query: 185 DGTTLSHSLAGRHKI 199 D T+S +L R ++ Sbjct: 186 DEITISAALKNRREL 200 >UniRef50_C8PX50 Recombination protein RecR n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PX50_9GAMM Length = 202 Score = 264 bits (677), Expect = 8e-70, Method: Composition-based stats. Identities = 95/201 (47%), Positives = 134/201 (66%), Gaps = 6/201 (2%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 +P +L++ L+ LPGVGPKSAQRMA LL R G L +AL AM +I C CR Sbjct: 3 TPKFDELVKQLKVLPGVGPKSAQRMALHLLSYKRPQGQALGEALIVAMHDIKQCQVCRGL 62 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 +++++C ICS+PRR E +C+VE+ AD+ AIEQT F+G+YFVL GHLSP+DGIG + + Sbjct: 63 SDEDICPICSDPRRNER-VLCIVETAADMMAIEQTAGFNGKYFVLGGHLSPIDGIGVEQL 121 Query: 124 GLDRLEQRLAEE-----KITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVG 178 G+++L L + + E+ILAT+ TVEG+ TA++I+E Y SRIA G+P+G Sbjct: 122 GINQLIGLLKQHQAAQTPVEEIILATSTTVEGQTTAHFISEAVKPYVTHISRIAQGIPMG 181 Query: 179 GELEMVDGTTLSHSLAGRHKI 199 GELE +D TL +L R ++ Sbjct: 182 GELEYLDSMTLGQALQNRGRL 202 >UniRef50_Q5ZRX0 Recombination protein recR n=10 Tax=Gammaproteobacteria RepID=RECR_LEGPH Length = 199 Score = 264 bits (675), Expect = 1e-69, Method: Composition-based stats. Identities = 107/196 (54%), Positives = 139/196 (70%), Gaps = 1/196 (0%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 L++L+EALRCLPGVGPKSAQRM F LLQ R G+ LA L +AM I HC C +T Sbjct: 4 DALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCNNYT 63 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 EQ +C +C NP R ++ +CVVESPAD+ AIEQ+ F G+YFVLMG +SPLDG+GPDDIG Sbjct: 64 EQTLCALCQNPNR-DSTLLCVVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIG 122 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 L +L++ + EKI EVILA +P+VE + T ++I +L V S++AHG+P GGELE + Sbjct: 123 LPKLKELITREKIQEVILALSPSVESQTTIHFIHQLLKDETVNISQLAHGIPSGGELEFL 182 Query: 185 DGTTLSHSLAGRHKIR 200 DG T+S +L R I Sbjct: 183 DGNTISSALKNRAVIN 198 >UniRef50_A6LBX7 Recombination protein recR n=84 Tax=cellular organisms RepID=RECR_PARD8 Length = 208 Score = 263 bits (672), Expect = 3e-69, Method: Composition-based stats. Identities = 81/201 (40%), Positives = 117/201 (58%), Gaps = 2/201 (0%) Query: 2 QTSPLL-TQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 + L + L LPGVG K+A R+A +L+RD A AL ++ +C C Sbjct: 4 RYPSALLENAVNELASLPGVGRKTALRLALYMLRRDVGYTENFAAALVALRRDVKYCKVC 63 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 + EVC+IC+NP R ++ +CVVE+ ++ AIE TGQF G Y VL G +SP+DGIGP Sbjct: 64 HNICDDEVCSICANPSR-DHSLVCVVENIKEVMAIENTGQFRGVYHVLGGIISPMDGIGP 122 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 D+ +D L +R+AE ++ E+ILA + T+EG+ T +I + YDV S IA GV +G E Sbjct: 123 GDLRIDSLVRRVAEGEVKEIILALSTTMEGDTTNFFIYRKLSGYDVRISVIARGVSIGDE 182 Query: 181 LEMVDGTTLSHSLAGRHKIRF 201 +E D TL S+ R + Sbjct: 183 IEYADEITLGRSIINRTEFNL 203 >UniRef50_D1B5E4 Recombination protein RecR n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5E4_THEAS Length = 200 Score = 262 bits (671), Expect = 5e-69, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 108/196 (55%), Gaps = 1/196 (0%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 P + L+E L+ LPGVG K A+R AF +L + + L++A+ A + C+ C Sbjct: 6 IPSVDGLIEKLKRLPGVGEKGARRFAFFILGQPKDWVEDLSRAIREARWSVRPCSVCGGL 65 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 E ++C ICS+P R + ICVVES D A+E+ F+GRY VL G SPLDG Sbjct: 66 AEGDLCPICSDPAR-DREVICVVESQEDCVAMERHRIFNGRYHVLGGRYSPLDGEDIPSE 124 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 L L R+ + EVILA P+VEGE TA + E V+ SR++ G+PVGG + Sbjct: 125 ALASLRDRVERGGVQEVILALAPSVEGELTALAVKEALDDLPVKVSRLSSGLPVGGSIGF 184 Query: 184 VDGTTLSHSLAGRHKI 199 D TL +L GR + Sbjct: 185 ADSATLKLALEGRRGM 200 >UniRef50_A9HZ10 Recombination protein recR n=9 Tax=Burkholderiales RepID=RECR_BORPD Length = 202 Score = 262 bits (671), Expect = 5e-69, Method: Composition-based stats. Identities = 89/194 (45%), Positives = 128/194 (65%), Gaps = 1/194 (0%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 L L+EALR LPGVG +SA+RMA+ L+Q D G L +AL A+ + HCA C +F Sbjct: 8 PEPLVSLIEALRRLPGVGVRSARRMAYHLMQHDLQGADMLGRALAGAVQNLRHCARCNSF 67 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 TE ++C C+NP+R + +CVVE+PAD IE + + G Y+VLMG ++PL+GIGP ++ Sbjct: 68 TEDDICATCANPKRDPS-VLCVVETPADQNMIEASHGYRGLYYVLMGRVAPLEGIGPREL 126 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 RL +R ++ + EVILATN T EGE TA+++ E+ A ++ +R+A GVP G ELE Sbjct: 127 DFQRLLERASDGVVREVILATNFTAEGETTAHFLGEVLAGKGLKVTRLARGVPAGSELEY 186 Query: 184 VDGTTLSHSLAGRH 197 VD T++ +L R Sbjct: 187 VDAGTIAWALMERK 200 >UniRef50_Q1Q3A9 Strongly similar to recombination protein RecR n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3A9_9BACT Length = 215 Score = 262 bits (670), Expect = 6e-69, Method: Composition-based stats. Identities = 74/198 (37%), Positives = 120/198 (60%), Gaps = 1/198 (0%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 + L+ +PG+G K+A+R+A +L++ M+LA A+ + C C Sbjct: 18 YPQTVNNLISEFGKMPGIGQKTAERLACYVLKQPVDDAMKLAYAIRDVKKYMKICTVCFN 77 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 +E C+ICSN RR ++ ICVVE AD+ IE+TG+++G Y +L GH+SPL+GI PD Sbjct: 78 VSENSPCHICSNLRR-DSSIICVVEQFADLLTIEKTGKYNGHYHILQGHISPLEGIDPDL 136 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + + RL QR+ + + EVILATN +EG+ TA YI + + V+ +RIA G+P G LE Sbjct: 137 LTIGRLLQRVKDGSVKEVILATNLNMEGDITAVYIHKQLQSFGVKVTRIARGLPTGSYLE 196 Query: 183 MVDGTTLSHSLAGRHKIR 200 + ++ +++ R+++R Sbjct: 197 YANTAIVADAVSDRNEMR 214 >UniRef50_Q04NX9 Recombination protein recR n=6 Tax=Leptospira RepID=RECR_LEPBJ Length = 197 Score = 262 bits (670), Expect = 6e-69, Method: Composition-based stats. Identities = 81/193 (41%), Positives = 126/193 (65%), Gaps = 1/193 (0%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 L ++++AL LPG+G KSA R++F LL+ ++ LT ++I C C ++ E Sbjct: 6 LEEMVDALSSLPGIGRKSAFRISFHLLRLEQGHFNHFIHQLTNTKNKIKFCKRCGSYAET 65 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 E+CNIC++ +R + CVVE P DI+ IE T +F G+Y VL G +SPL+GIGP D+ + Sbjct: 66 EICNICTSEKR-DTHTFCVVEQPEDIFFIENTREFHGKYHVLNGVISPLEGIGPKDLRIK 124 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 L +R+ E+I EV++ATNPT+EG+ATA+Y+A V+ +RIA+G+ VGG +E+ D Sbjct: 125 ELLERIEPEQIKEVLVATNPTLEGDATADYLASQLKPLSVDVTRIAYGITVGGSIELADQ 184 Query: 187 TTLSHSLAGRHKI 199 TL ++ R ++ Sbjct: 185 YTLGRAIRSRLQL 197 >UniRef50_C0QUF6 Recombination protein RecR n=4 Tax=Aquificales RepID=C0QUF6_PERMH Length = 202 Score = 261 bits (667), Expect = 1e-68, Method: Composition-based stats. Identities = 86/196 (43%), Positives = 124/196 (63%), Gaps = 1/196 (0%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 L + +E + LPG G KSA+R A LL R +++ + L + +I C++C + Sbjct: 8 PSTLKEAVEKISELPGYGEKSAKRFAVNLLDMPRGEAIQIIKTLFDMLEKIHPCSECGLY 67 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 TE+E+C+ICS+ R + ICVVE D +AIE+TG+F G Y V+ G LSPL+GI +D+ Sbjct: 68 TEEEICSICSSEER-DRSVICVVEETFDAFAIEKTGKFKGVYHVIGGRLSPLEGITAEDL 126 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 +++L +R+ + + E+ILATNPTVEGEATA+YI L DV SRIA+G+P G LE Sbjct: 127 NIEKLVERVDKNGVKEIILATNPTVEGEATASYIHNLLKDRDVIISRIAYGLPFGAVLEN 186 Query: 184 VDGTTLSHSLAGRHKI 199 D TLS +L + I Sbjct: 187 ADDFTLSKALEHKTII 202 >UniRef50_Q7UQ68 Recombination protein recR n=3 Tax=Planctomycetaceae RepID=RECR_RHOBA Length = 199 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 75/194 (38%), Positives = 128/194 (65%), Gaps = 1/194 (0%) Query: 6 LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTE 65 ++ L++ L LPG+G KSA+R+AF LL+ + LA A+ R +++ +C+ C +E Sbjct: 7 AVSDLVDQLSKLPGIGRKSAERLAFHLLRVHEDEALALASAIRRVRTDVRYCSVCYNLSE 66 Query: 66 QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGL 125 E+C ICS+P+R + ++CVVE P D+ +++ +G +SG Y VL+G ++PLDGI PD + + Sbjct: 67 TELCRICSDPKR-DATRLCVVEQPRDLLSLDASGVYSGLYHVLLGRIAPLDGITPDQLTI 125 Query: 126 DRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVD 185 D L +R+ +E+I+ATNPTVEG+ T+ Y++ L ++ VE +R+A G+ G LE + Sbjct: 126 DSLVERVRTGNFSEIIMATNPTVEGDGTSLYLSNLMQEFPVEITRLARGITSGSVLEYAN 185 Query: 186 GTTLSHSLAGRHKI 199 ++ +L GR ++ Sbjct: 186 REIIADALTGRQRL 199 >UniRef50_O83969 Recombination protein recR n=3 Tax=Treponema RepID=RECR_TREPA Length = 201 Score = 259 bits (664), Expect = 3e-68, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 121/196 (61%), Gaps = 1/196 (0%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 P + +++E L LPG+G K A R+A+ LL+RD + LA+ + + C C F Sbjct: 2 IPAIEEVVEHLSRLPGIGVKLATRLAYHLLKRDPAEAQVLARGIACLHERVYRCVCCGAF 61 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 E C +C++ R + G ICVVE D+ + G++ G + VL G ++PL+G+GPD + Sbjct: 62 CEGRTCALCTDASR-DRGIICVVERAQDVEMMAGVGEYRGLFHVLGGVIAPLEGVGPDQL 120 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 + L +RL E + EVILA NPTVEG+ TA Y+ ++ A + V +R+A G+PVGG+LE Sbjct: 121 RIAALLKRLQESSVREVILALNPTVEGDTTALYVQKILANFPVIVTRLASGIPVGGDLEY 180 Query: 184 VDGTTLSHSLAGRHKI 199 +D TTL+HSL GR + Sbjct: 181 IDRTTLAHSLRGRRPL 196 >UniRef50_B0VGB5 Recombination protein RecR n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VGB5_9BACT Length = 199 Score = 259 bits (663), Expect = 3e-68, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 119/200 (59%), Gaps = 1/200 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M S L +L+++ PG+G K+AQR+A+ L+ +D++ + LA+ + + C+ C Sbjct: 1 MLFSENLEKLIQSFNRFPGIGRKTAQRLAWYLVAQDKNFALNLAETIKTTVESFKTCSQC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 +E + C C +P R ++ +CVVE+ +DI +E +F GRYFVL LSPLDG GP Sbjct: 61 NMLSESDPCPFCISPDRSDS-YLCVVENSSDIQILEGMNEFKGRYFVLGHLLSPLDGYGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + I L +R+ +EVILA P+ EGEAT +Y+ EL + +R++ G+P GG+ Sbjct: 120 EQINTAMLLERIENLHPSEVILALKPSAEGEATIHYLWELLKDKGISITRLSTGIPFGGD 179 Query: 181 LEMVDGTTLSHSLAGRHKIR 200 LE + TL+++ R+ ++ Sbjct: 180 LEYSNLNTLANAWKRRYTVQ 199 >UniRef50_A3ZPF3 Recombinant protein RecR n=3 Tax=Planctomycetaceae RepID=A3ZPF3_9PLAN Length = 199 Score = 259 bits (663), Expect = 4e-68, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 125/199 (62%), Gaps = 1/199 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 +QT+ +T+L++ LPG+G KSA+R+A+ +L+ S + LA ++ + +C+ C Sbjct: 2 VQTTDSVTRLVDEFAKLPGIGRKSAERLAYHILRVHESEALALADSIRTVKQNVRYCSQC 61 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 E E+C +C + RR + +C+VE P D+ A+EQ+G F G Y VL+G ++PL+GIGP Sbjct: 62 FNLAESELCTVCQDTRRDQT-LLCIVEQPRDLMALEQSGMFPGLYHVLLGRIAPLEGIGP 120 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 D + +D L R+ K E+I+ATNPT EG+ TA +I+ L A+ V +R+A G+ G Sbjct: 121 DQLTIDALVDRVRAGKFREIIMATNPTTEGDGTALHISNLLAELPVTLTRLARGITSGSV 180 Query: 181 LEMVDGTTLSHSLAGRHKI 199 LE + L+ +L+GR K+ Sbjct: 181 LEFTNKEILADALSGRQKL 199 >UniRef50_D2MMY3 Recombination protein RecR n=1 Tax=Bulleidia extructa W1219 RepID=D2MMY3_9FIRM Length = 200 Score = 259 bits (662), Expect = 5e-68, Method: Composition-based stats. Identities = 77/202 (38%), Positives = 123/202 (60%), Gaps = 5/202 (2%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ L L+E +R LPGVG K+A+R AF L + ++ + A A+ +++ +C C Sbjct: 1 MKYPDSLNHLIEMIRQLPGVGEKTAERYAFALYEMEKEEAIEFAHAIVNMKNKVKNCLIC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 +E+E C ICS+ +R ++ +I VV+SP DI AIE G++ G Y VL G +S GI P Sbjct: 61 GNMSEEEQCAICSSSKR-DHTKILVVQSPKDIIAIENMGEYDGVYHVLNGLISATKGILP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELC--AQYDVEASRIAHGVPVG 178 +++ + L QR + EVILAT+ T++GE T+ Y+ ++ ++ +RIAHG+P G Sbjct: 120 ENLKIKELIQRAK--EAREVILATSATLDGETTSLYLTKVLDQEYPNLLVTRIAHGLPSG 177 Query: 179 GELEMVDGTTLSHSLAGRHKIR 200 L+ D TLSH+L+ R K++ Sbjct: 178 AMLDYADEMTLSHALSERRKVK 199 >UniRef50_C7N9F2 Recombination protein RecR n=6 Tax=Fusobacteriaceae RepID=C7N9F2_LEPBD Length = 198 Score = 259 bits (662), Expect = 6e-68, Method: Composition-based stats. Identities = 72/195 (36%), Positives = 117/195 (60%), Gaps = 2/195 (1%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 L L++ LPG+G KSA R+AF +L++ + R+ + + + + I HC C + Sbjct: 2 KKLDDLIDVFAKLPGIGRKSAARIAFDVLEKSEADIDRMLEIIKDSHTNIKHCEICGNLS 61 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 E ++C IC+N +R + ICVVE D+ A E++ ++G Y VL G + PL+G+ +D+ Sbjct: 62 ENDICEICANEKRDK-EVICVVEGVRDVIAFEKSETYNGLYHVLGGKIDPLNGVTIEDLN 120 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 L +L +RL + + E+ILA NP +EGE T+ Y+ + +V+ S+IA G+P+GG +E Sbjct: 121 LMKLMRRL-DGNVKEIILALNPDLEGETTSLYLTKFLKDKNVKISKIASGIPMGGNIEYT 179 Query: 185 DGTTLSHSLAGRHKI 199 D TL SL GR + Sbjct: 180 DMATLGRSLEGRVNV 194 >UniRef50_A6DLE7 Recombination protein RecR n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DLE7_9BACT Length = 200 Score = 258 bits (661), Expect = 6e-68, Method: Composition-based stats. Identities = 77/201 (38%), Positives = 123/201 (61%), Gaps = 3/201 (1%) Query: 1 MQ-TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCAD 59 M+ Q +E + LPG+G K A+++A L S A + ++ +CA Sbjct: 1 MKLYPEQFQQAIETIASLPGIGKKGAEKLALALYSWPESKLKHFASLIDSMQHDLHNCAQ 60 Query: 60 CRTFTEQE-VCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGI 118 C F++++ +C ICS+P+R N QICVVE + + IE++G F G Y VL G LSP+ GI Sbjct: 61 CGFFSQKDALCPICSDPKRL-NHQICVVEQVSQLPVIEKSGSFKGLYHVLHGKLSPMSGI 119 Query: 119 GPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVG 178 GPDDI +D L QR E ++EVILAT+ +EG+ATA++IA+L ++ + +RIA G+P+G Sbjct: 120 GPDDINIDSLLQRCKENHVSEVILATSTDIEGQATASFIAKLLNEHGINTTRIAQGIPIG 179 Query: 179 GELEMVDGTTLSHSLAGRHKI 199 +L D +++ ++ R ++ Sbjct: 180 ADLNYADAASIAMAINSRREL 200 >UniRef50_A4QAN3 Recombination protein recR n=14 Tax=Corynebacterineae RepID=RECR_CORGB Length = 218 Score = 258 bits (661), Expect = 7e-68, Method: Composition-based stats. Identities = 97/218 (44%), Positives = 126/218 (57%), Gaps = 22/218 (10%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 L L++ L LPGVGPKSAQR+AF LL D + RL +AL + C C Sbjct: 2 FEGPLQDLIDELSRLPGVGPKSAQRIAFHLLNVDPTDITRLQEALGGVRDGVQFCRICCN 61 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 + +EVC ICS+ R + G ICVVE P DI IE+TG+FSGRY VL G L PL IGP + Sbjct: 62 ISREEVCRICSDSGR-DGGTICVVEEPKDIQVIERTGEFSGRYHVLGGALDPLANIGPRE 120 Query: 123 IGLDRLEQRL--------------------AEEKITEVILATNPTVEGEATANYIAELCA 162 + + L QR+ A + EVILAT+P EGEATA+Y+ L Sbjct: 121 LNISTLLQRIGGVLPDRELADSTPENKLFDATPTVREVILATDPNTEGEATASYLGRLLK 180 Query: 163 QY-DVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKI 199 + D+ SR+A G+P+GG+LE VD TLS +L+GR +I Sbjct: 181 DFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLQI 218 >UniRef50_C6HVG6 Recombination protein RecR n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HVG6_9BACT Length = 215 Score = 258 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 84/205 (40%), Positives = 116/205 (56%), Gaps = 9/205 (4%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 L++ R LPG+G K+A R+AF LLQ S LA A++ + C++CR Sbjct: 12 FPAPFQDLVDLFRRLPGIGTKTATRLAFHLLQSSESERQELASAVSTLKERLLPCSECRN 71 Query: 63 FTEQEV--------CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSP 114 C IC +P R ++ + VVE +Y+IE++G+F GRY VL G LSP Sbjct: 72 IVASPPPESPEVPRCAICLDPAR-DSTILIVVEDIQTLYSIEKSGEFRGRYHVLEGRLSP 130 Query: 115 LDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHG 174 L+GI P+ + + L QRL I EV+LAT+PT +GEATA Y++ L + SRIA G Sbjct: 131 LEGIAPEMLRVRELLQRLENPDIREVVLATSPTTDGEATALYLSRLVKPLGIRVSRIAFG 190 Query: 175 VPVGGELEMVDGTTLSHSLAGRHKI 199 +PVG ELE VD TL ++ GRH Sbjct: 191 IPVGLELEYVDEVTLIRAVEGRHPF 215 >UniRef50_C9RQ73 Recombination protein RecR n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQ73_FIBSS Length = 198 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 113/196 (57%), Gaps = 2/196 (1%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 L L+ LPG+G K+A+R+A+ +L R + R A +L +A ++ C C F Sbjct: 5 PQSLENLISEFASLPGIGLKTARRLAYHMLSRKKGDVERFADSLMQAAEKVHPCPRCHAF 64 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 T++++C C R+ ICVVE +DI E++ G YFVL G +SPLDGIGP+ + Sbjct: 65 TDEDICPTCR--AREGAKSICVVEKNSDILPFERSSVHKGLYFVLGGVISPLDGIGPEAL 122 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEM 183 L +L +R+ E I E++LA + E ++TA I + A +V+ +R+A G+P+G +LE Sbjct: 123 HLPQLVERIKAENIEELVLALGSSPEADSTALMIDRMLAGVNVKRTRLARGIPMGSDLEF 182 Query: 184 VDGTTLSHSLAGRHKI 199 +D T+ + GR + Sbjct: 183 IDEVTMLRAFEGRVSL 198 >UniRef50_Q0B0W3 Recombination protein recR n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RECR_SYNWW Length = 197 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 76/199 (38%), Positives = 123/199 (61%), Gaps = 2/199 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ + L L++ L LPG+GPK+AQR+A +L+ +LAQA+ ++ C+ C Sbjct: 1 MRLARPLENLIDQLLKLPGIGPKTAQRLALYILKLPEMEARQLAQAIVDCRQKVFPCSRC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T+ + C ICS+ R ++ IC+ E +D+ AIE+TG F G+YFVL + ++ G Sbjct: 61 GYLTDFDPCLICSDESRDKS-LICIGEESSDVIAIERTG-FRGQYFVLNKDFNLMEDKGL 118 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 +D+ L LE RLA +I EV+LA NP ++GE + ++A + + V+ +R+AHG+PVGG+ Sbjct: 119 EDLNLKPLEDRLATGEIKEVVLALNPDMDGEVMSRFLATVAGSFGVKVTRLAHGLPVGGD 178 Query: 181 LEMVDGTTLSHSLAGRHKI 199 +E D TL +L GR ++ Sbjct: 179 IEFADEITLRRALEGRKEL 197 >UniRef50_B2UKM6 Recombination protein RecR n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKM6_AKKM8 Length = 202 Score = 254 bits (651), Expect = 9e-67, Method: Composition-based stats. Identities = 74/198 (37%), Positives = 108/198 (54%), Gaps = 2/198 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 + +L+ AL+ LPG+G + A+RMA +LQ +A+ + +A + C C Sbjct: 6 YPIPVLELVTALKQLPGIGTRGAERMALWMLQGHMGEAEAIARTIGQAAEHVTPCPVCGF 65 Query: 63 F-TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 F TE E C C + R ++ ICVVE D+ IE++ + G Y L G LSPLD + P+ Sbjct: 66 FSTEGEPCAACRDEER-DSRLICVVEQATDVIPIERSSAYRGLYHCLGGKLSPLDDVEPE 124 Query: 122 DIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGEL 181 D+ + L +R++ + EVILAT VEGEATA Y+ L + D SR A G+P G L Sbjct: 125 DLNIQSLVERVSRQPDCEVILATGSDVEGEATATYLHHLLKEMDCRISRPAQGLPAGSGL 184 Query: 182 EMVDGTTLSHSLAGRHKI 199 D TL +L GR ++ Sbjct: 185 SHADTLTLMKALEGRTRL 202 >UniRef50_B0S0K8 Recombination protein recR n=2 Tax=Finegoldia magna RepID=RECR_FINM2 Length = 202 Score = 254 bits (651), Expect = 9e-67, Method: Composition-based stats. Identities = 74/200 (37%), Positives = 123/200 (61%), Gaps = 3/200 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 + +L++ L LP +G KSA+R+A+ ++ D L +++ + I CA+C Sbjct: 4 YPKAMDELIKNLSNLPTIGRKSARRLAYRIIDMDPKKVDELVESIVNVKTNIRPCANCGN 63 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 T++++C+ICS+ +R +N I VVE ++ +IE+TG+++G+Y VL G LSP D I P D Sbjct: 64 LTDKKLCDICSDQKR-DNSVITVVEDSMNVISIEKTGEYNGKYHVLGGLLSPRDNIAPQD 122 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCA--QYDVEASRIAHGVPVGGE 180 + L+ L R ++ + EVILA +PT G+ T N+I E+ +Y+V+ SRIA GVP+G Sbjct: 123 LNLENLFLRCKKDYVKEVILALSPTTNGDLTTNFIIEVLKNEEYNVKVSRIAMGVPLGAN 182 Query: 181 LEMVDGTTLSHSLAGRHKIR 200 LE D +L ++ R +I+ Sbjct: 183 LEYYDEMSLYKAILDRREIK 202 >UniRef50_Q0EXX1 Recombination protein RecR n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXX1_9PROT Length = 204 Score = 254 bits (649), Expect = 1e-66, Method: Composition-based stats. Identities = 88/199 (44%), Positives = 119/199 (59%), Gaps = 5/199 (2%) Query: 1 MQTS---PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHC 57 M L +++E L LPGVGPK+A RM LL R LAQAL ++G C Sbjct: 1 MHFPGMPAPLARVVEMLSSLPGVGPKTAMRMGLNLLTRPAGDAAALAQALECLHEQVGFC 60 Query: 58 ADCRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDG 117 C F+EQ C+ C +P R + +CVVE P D+ +E+ + G Y VL+G LSP+DG Sbjct: 61 PVCGCFSEQGHCHFCDDPSR-DAATLCVVEQPVDVLMMERGHGYRGSYHVLLGRLSPVDG 119 Query: 118 IGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPV 177 +GP+ + L L+QR+ + I E+ILAT+ TV+GEATA+Y+A V SRI+ GVP Sbjct: 120 VGPEQLRLASLDQRMKQG-INEIILATSATVDGEATAHYLANRYQHAGVSVSRISRGVPE 178 Query: 178 GGELEMVDGTTLSHSLAGR 196 GGELE +D TLS +L R Sbjct: 179 GGELEYLDEHTLSRALDQR 197 >UniRef50_Q4JSL5 Recombination protein recR n=8 Tax=Corynebacterium RepID=RECR_CORJK Length = 250 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 83/250 (33%), Positives = 120/250 (48%), Gaps = 54/250 (21%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 L +++ LPG+GPKSAQR+A LL + R AL R + C C Sbjct: 2 FEGPLQDVIDEFSRLPGIGPKSAQRIALHLLNEEPEDIERFQSALGRLQRGVTFCRICHN 61 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 ++++VC IC++ R ++ ICVVE DI IE+T ++ GRY VL G L PL+GIGP + Sbjct: 62 ISQEDVCRICADSNRDKS-IICVVEESKDIQVIERTAEYRGRYHVLGGALDPLNGIGPKE 120 Query: 123 IGLDRLEQRL-------------------------------------------------- 132 + + L QR+ Sbjct: 121 LNVTPLVQRIGGALPDVALGAKGGGASLGDADTPADGESSGADAAETGNAKTAAVETDVE 180 Query: 133 --AEEKITEVILATNPTVEGEATANYIAELCAQY-DVEASRIAHGVPVGGELEMVDGTTL 189 +ITEVI+AT+P EGEATA+Y+ L + + +R+A G+P+GG+LE VD TL Sbjct: 181 YDEAPEITEVIIATDPNTEGEATASYLGRLLRDFPGLTVTRLASGIPMGGDLEFVDELTL 240 Query: 190 SHSLAGRHKI 199 S + AGR + Sbjct: 241 SRAFAGRTAL 250 >UniRef50_A9NE31 Recombination DNA repair protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NE31_ACHLI Length = 195 Score = 253 bits (648), Expect = 2e-66, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 106/196 (54%), Gaps = 3/196 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 ++ +L++ L+ LPG+G K+A+R+A L D L + I C C Sbjct: 2 YPTIILELIDDLKKLPGIGEKTAERLALHLTNWDSEDLKHFGTHLIELKTNISFCDICGL 61 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 T+ +C+IC + + + QI VV D++AIE+T F G Y VL G + GI P D Sbjct: 62 LTDDHICSICKDETKDKT-QIMVVSDSKDVFAIEKTKTFHGNYHVLNGLIDFSKGIEPKD 120 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + D+L R+ + I E+I+ATN VEGE TA YI L D+ SR+ +G+PVG +L+ Sbjct: 121 LNFDKLTNRVKD--IKEIIIATNSNVEGELTAQYIKSLYKDLDLTISRLGYGLPVGADLK 178 Query: 183 MVDGTTLSHSLAGRHK 198 D TL+ ++ R K Sbjct: 179 YADQLTLTKAVENRQK 194 >UniRef50_B3DWR4 Recombinational DNA repair protein RecR n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DWR4_METI4 Length = 199 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 118/197 (59%), Gaps = 1/197 (0%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 P + L+ +L+ LPG+GP+SA+R+ LL+ + +LAQ++ ++I C+ C Sbjct: 4 FPPAIQNLIHSLKELPGIGPRSAERITLYLLEETKGTKQKLAQSINEIGAKIKPCSRCGF 63 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 +TE+ +C+IC + R + C+V P D+ IE+TG F G Y VL +SPL+G P+D Sbjct: 64 YTEETLCSICLDHSRDKQC-FCLVIHPIDVIKIERTGAFRGVYHVLGKKISPLEGHVPED 122 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + L L QR+ EEK E+ILA E EATA YI ++ + + S +A G+P G LE Sbjct: 123 LPLSPLLQRIDEEKPREIILAFGTDAEAEATALYIGQILKKRAIRVSSLAMGLPAGSGLE 182 Query: 183 MVDGTTLSHSLAGRHKI 199 D TLS++L+GR ++ Sbjct: 183 YADSVTLSYALSGRREL 199 >UniRef50_C8P1Z7 Recombination protein RecR n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1Z7_ERYRH Length = 196 Score = 252 bits (645), Expect = 4e-66, Method: Composition-based stats. Identities = 74/198 (37%), Positives = 116/198 (58%), Gaps = 3/198 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 L QL+E+ LPGVG K+A+R A ++L + + +Q LT A +EI C C Sbjct: 2 YPKKLEQLIESFMMLPGVGQKTAERYALSILDQQTQDVDKFSQDLTIARNEIQSCKVCHN 61 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 +++E+C IC + R + ICVV + + ++IE+ ++ G Y VL G +S GI P++ Sbjct: 62 LSDEEICQICKDNTR-DRSIICVVATAKEAFSIEKMNEYHGVYHVLGGLISTQKGILPEN 120 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + + L R+ +E +TEVILA N TVEGE T+ Y+A+ + SR+A G+P+GG L+ Sbjct: 121 LNILSLINRV-DENVTEVILALNATVEGEMTSLYLAKKLEDK-TDVSRLAFGLPIGGHLD 178 Query: 183 MVDGTTLSHSLAGRHKIR 200 D TL + GR K++ Sbjct: 179 YADDMTLMKAFEGRSKVK 196 >UniRef50_A5EY33 Recombination protein recR n=2 Tax=Gammaproteobacteria RepID=RECR_DICNV Length = 201 Score = 252 bits (644), Expect = 6e-66, Method: Composition-based stats. Identities = 97/196 (49%), Positives = 138/196 (70%), Gaps = 1/196 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M SP L++AL CL GVG K+AQRMA LL + + LA+ALT A++ + C C Sbjct: 1 MSFSPSFDALVQALTCLSGVGKKTAQRMALDLLLKKNAEAATLAKALTTALATVQRCRYC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 R ++ EVC +C++P R QICVVE+PAD+ AIEQ + G +FVLMGH++PLDG+GP Sbjct: 61 RNLSDAEVCLLCADPLRN-RQQICVVETPADVIAIEQATDYRGLFFVLMGHIAPLDGMGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + +G+D L+ RLA E I+E++LATN T+EGE TA ++AEL A++ ++A+R+A+GVP+G E Sbjct: 120 EALGMDILDDRLANEAISELVLATNATLEGETTAYFLAELAAKHGIQATRLAYGVPLGSE 179 Query: 181 LEMVDGTTLSHSLAGR 196 L +D TL H+ R Sbjct: 180 LSYIDKQTLHHAFQSR 195 >UniRef50_UPI00016B25D7 recombination protein RecR n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25D7 Length = 205 Score = 251 bits (641), Expect = 1e-65, Method: Composition-based stats. Identities = 74/200 (37%), Positives = 123/200 (61%), Gaps = 5/200 (2%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 LT L++ L LPGVG ++A+R A+ LL+ RL+ ++ + + +C Sbjct: 7 PRALTTLIDELGNLPGVGVRTAERYAYHLLRTKAESNKRLSNSIANLKANVKYCPATFAL 66 Query: 64 --TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 +++E+ + ++P R + I VVE P DI A+E+TGQ++G Y VL G +SP+D IGP+ Sbjct: 67 IDSDEEISPLYADPTRNKK-VIAVVEEPLDIIALERTGQYNGTYHVLGGVISPIDNIGPE 125 Query: 122 DIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCA--QYDVEASRIAHGVPVGG 179 + + L R+ ++++ E+I+ATN +VEGE+TA ++ + +V+ SR+A G+PVG Sbjct: 126 QLHIKELVIRIKQDEVEEIIIATNASVEGESTALFLQRYIKENEINVKMSRLARGLPVGV 185 Query: 180 ELEMVDGTTLSHSLAGRHKI 199 +LE D TLSH+L GR + Sbjct: 186 DLEYADQITLSHALEGRRSL 205 >UniRef50_C1TMJ9 Recombination protein RecR n=3 Tax=Synergistaceae RepID=C1TMJ9_9BACT Length = 203 Score = 248 bits (634), Expect = 9e-65, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 111/197 (56%), Gaps = 2/197 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M +L+ L+ LPGVG KSA+RMAF + Q + LA A + C C Sbjct: 1 MALPGPFERLIGLLKRLPGVGEKSARRMAFFVFQAPEGYSIELADAFLSLKKNLSVCEIC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 T+++ CNICS+P R + +CVVE D+ +IEQ G + G Y+VL G +SPLDG Sbjct: 61 GNLTDRQPCNICSDPLR-DRSTLCVVEGIEDLLSIEQAGVYDGLYYVLGGTVSPLDGEDL 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQY-DVEASRIAHGVPVGG 179 + LD L + +++EVI+ATNP VEG+ T + + D++ SR+++G+PVGG Sbjct: 120 PEGSLDGLINMIERGRVSEVIVATNPRVEGDMTYHAVLSALKGMSDLKKSRLSYGLPVGG 179 Query: 180 ELEMVDGTTLSHSLAGR 196 +E D TL ++ R Sbjct: 180 SIEFADRVTLHAAMETR 196 >UniRef50_UPI000174441B recombination protein RecR n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174441B Length = 202 Score = 245 bits (626), Expect = 7e-64, Method: Composition-based stats. Identities = 77/198 (38%), Positives = 120/198 (60%), Gaps = 2/198 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 + +L+ ++ LPG+G +SA+R+ ++ R + LA+AL + +G C +C Sbjct: 6 YPAPIRELILQMKSLPGIGQRSAERLVLWMMGRGHARAAELARALAQLEQRVGICPECGF 65 Query: 63 FTEQEV-CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 F E++ C +C + +R + +CVVE AD+ +E++G FSG+Y VL G LSPLD I P Sbjct: 66 FIERDAACGLCQSDKR-QTTVVCVVEQAADVLRLERSGAFSGQYHVLGGRLSPLDNITPS 124 Query: 122 DIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGEL 181 D+ + L R+ EVILA + VEGEATANY+A++ V+ +R+A G+P GG L Sbjct: 125 DLRIRELAARVPALGAEEVILALSADVEGEATANYLADILRPLGVKVTRLAQGMPAGGGL 184 Query: 182 EMVDGTTLSHSLAGRHKI 199 + VD TL H+L+GR + Sbjct: 185 DHVDEMTLHHALSGRRAM 202 >UniRef50_B5Y7S4 Recombination protein RecR n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7S4_COPPD Length = 201 Score = 245 bits (626), Expect = 7e-64, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 110/197 (55%), Gaps = 5/197 (2%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT-E 65 L +L + R LPGVGP++A++MA+ L + R + L +I C C Sbjct: 3 LEELSKQFRRLPGVGPRTAEKMAYYWLTLEDDEAERFLRTLENFRRQITLCKRCHNLAVG 62 Query: 66 QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGL 125 ++CNIC + RR + I VVE+P D+ IEQ G + G Y VL G +SP G+ P+ + + Sbjct: 63 SDLCNICQDNRRDKA--IVVVETPQDVENIEQAGIYHGYYHVLHGLISPRKGVTPEQLFI 120 Query: 126 DRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQY--DVEASRIAHGVPVGGELEM 183 L R+ +E IT+VI+AT+ T+EG+ TA+Y+A+ ++ R+ G+PVGGEL Sbjct: 121 SDLFDRIVDEGITQVIIATSFTMEGDITADYLAKQLKTLQPNIPIYRLGTGLPVGGELNY 180 Query: 184 VDGTTLSHSLAGRHKIR 200 D TL + + K+ Sbjct: 181 ADKATLRAAFITKQKVG 197 >UniRef50_Q73FZ1 Recombination protein recR n=14 Tax=Rickettsiales RepID=RECR_WOLPM Length = 201 Score = 245 bits (626), Expect = 8e-64, Method: Composition-based stats. Identities = 76/192 (39%), Positives = 114/192 (59%), Gaps = 1/192 (0%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 + L+ A LP +GP S++R+ LLQ + LA + I C C + Sbjct: 5 IKNLVHAFSKLPSLGPSSSRRLVIHLLQNKEKVMLPLASLIKELADLIIECEVCGNLDTK 64 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 C+IC+NP+R + +CVVE D++A E+ +SG Y VL G LS ++GIGP ++ LD Sbjct: 65 SPCSICTNPKR-DTKLLCVVEELGDLWAFEKGNIYSGLYHVLGGRLSAINGIGPKELNLD 123 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 + +R+ E KI E+I+A NPT+EG+ TA YI EL DV+ SR+A G+P+GGE++ +D Sbjct: 124 TILKRVTESKIEEIIIAINPTLEGQVTAQYIIELLKNLDVKISRLACGIPMGGEIDYLDE 183 Query: 187 TTLSHSLAGRHK 198 TL +L R + Sbjct: 184 GTLRIALTSRQE 195 >UniRef50_C0QZV8 Recombination protein recR n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=RECR_BRAHW Length = 201 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 113/202 (55%), Gaps = 3/202 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M L +L + + LPG+G ++A R+A L D + L+ I C C Sbjct: 1 MNNIQSLDKLTQIISRLPGIGTRTAMRLALYLFDCDDEYLKEFSDVLSSLHENIKLCQVC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 + ++ ++C+ICSN +R+ + +IC+VES D+ AIE+T +++G Y +L G +SPL GIG Sbjct: 61 YSLSDNDICDICSNDKRE-HNKICIVESYPDMLAIEKTEEYNGVYHILGGLISPLKGIGI 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQ--YDVEASRIAHGVPVG 178 DI + L +R+ I E+++A + ++E + TA+YI + ++ +RI +G+ + Sbjct: 120 SDIRIKELIERVNNNSIEEIMIAFSASLEADTTASYIYKTLKDNNFNGRITRITYGISLA 179 Query: 179 GELEMVDGTTLSHSLAGRHKIR 200 ++E D +L+ S+ R + Sbjct: 180 SDIENADSRSLARSILDRVDMN 201 >UniRef50_D0RR34 Recombination protein RecR n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RR34_9RICK Length = 205 Score = 243 bits (620), Expect = 3e-63, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 112/203 (55%), Gaps = 3/203 (1%) Query: 1 MQTSPL-LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCAD 59 M+ + L L+ + LPG+GPKSA+R+A L + + LA L A +I C Sbjct: 1 MKFTEPVLDNLISLISRLPGLGPKSARRIALHLFKNKENLMKPLADTLGIAHEKILRCKI 60 Query: 60 CRTFTEQEV-CNICSNPRRQEN-GQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDG 117 C + C I + Q+C+VE+ AD++A+E T + G Y +L G LS L+G Sbjct: 61 CGAIKSVDANCTISKCEYIDNSYDQLCIVENIADMWAMEATNIYKGHYHILGGTLSALNG 120 Query: 118 IGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPV 177 P+ + + L R+ + + EVI+AT+ T+EG+ TA+YI + +++ +++AHG+PV Sbjct: 121 SDPESLLIGSLIDRVKKNNVKEVIIATSATIEGQTTAHYINDSLKNLNIKITKLAHGLPV 180 Query: 178 GGELEMVDGTTLSHSLAGRHKIR 200 G E+E +D TL + R+ I Sbjct: 181 GSEIEYLDDGTLFSAFKYRNSIG 203 >UniRef50_C1QBW2 Recombination protein RecR n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QBW2_9SPIR Length = 203 Score = 243 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 113/201 (56%), Gaps = 3/201 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 + L +L + + LPG+G ++A R+A L D A L I C+ C Sbjct: 3 LNNIQSLDKLTQIISRLPGIGGRTAMRLALYLFDCDEEYLKEFADTLYTLHDNIKLCSKC 62 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 + ++ ++C ICSN +R+ + +ICVVE+ D+ AIE+T +++G Y VL G ++PL GIG Sbjct: 63 YSLSDNDICYICSNDKRE-HNKICVVETYPDMLAIEKTEEYNGVYHVLGGLIAPLKGIGI 121 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDV--EASRIAHGVPVG 178 DI + L +R+ E I E+++A + ++E + TA YI +L + +RI +G+ + Sbjct: 122 SDIRIKELIERVNTENIDEIMIAFSASLEADTTAGYIFKLLKDNNYTGRVTRITYGISLS 181 Query: 179 GELEMVDGTTLSHSLAGRHKI 199 ++E D +L+ S+ R ++ Sbjct: 182 SDIENADSRSLARSILDRVEM 202 >UniRef50_Q5PB75 Recombination protein recR n=5 Tax=Anaplasma RepID=RECR_ANAMM Length = 195 Score = 243 bits (620), Expect = 4e-63, Method: Composition-based stats. Identities = 67/193 (34%), Positives = 110/193 (56%), Gaps = 1/193 (0%) Query: 7 LTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQ 66 +T+L+ LP +GP S++R+ LL+ + + LA + C C Sbjct: 3 ITKLINLFAKLPSLGPASSRRIVLHLLRHRQDVMVPLAAGIRELEMHTKECTICHNLDTI 62 Query: 67 EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLD 126 C+ICS+ R ++ ICVVE D++A E+ +SG Y VL G LS L GIGP+D+ L Sbjct: 63 SPCSICSDKGRDQS-IICVVEELGDLWAFERGRIYSGVYHVLGGALSALSGIGPEDLNLG 121 Query: 127 RLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDG 186 + R+ + EVI+AT+ ++G+ T +YIA++ D + +R+A G+P+GGE++ +D Sbjct: 122 GIVDRIRTHGVKEVIVATSNDMDGQVTCHYIAQMVKGTDAKVTRLACGIPLGGEIDYLDE 181 Query: 187 TTLSHSLAGRHKI 199 TL +L+ R+ I Sbjct: 182 GTLRAALSSRYVI 194 >UniRef50_B2S0G5 Recombination protein RecR n=4 Tax=Borrelia RepID=B2S0G5_BORHD Length = 194 Score = 242 bits (619), Expect = 5e-63, Method: Composition-based stats. Identities = 78/194 (40%), Positives = 113/194 (58%), Gaps = 1/194 (0%) Query: 6 LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTE 65 ++ L+ + LPG+G K+A RM + +L + L Q L+ S I C +C F E Sbjct: 2 IIQDLIVLVSKLPGIGKKTASRMVYDILYKGEEYAKNLGQILSNLHSSIRKCKNCYNFAE 61 Query: 66 QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGL 125 +E C+IC + R +N ICVVE P D+ IE TG++ G YFVL GHL PL IGP+ + L Sbjct: 62 EEFCDICMDLSRNKN-VICVVEMPQDLEVIESTGEYDGFYFVLHGHLDPLKDIGPNRLNL 120 Query: 126 DRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVD 185 D+LE + + EVI+AT ++EG+ TANYI+ + D+ +RIA G+PVGG + D Sbjct: 121 DKLEGYVGALEAQEVIIATEFSIEGDVTANYISSILKNLDINVTRIASGLPVGGSISNAD 180 Query: 186 GTTLSHSLAGRHKI 199 T +L R + Sbjct: 181 KMTTLRALRLRFNM 194 >UniRef50_B7CCG8 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG8_9FIRM Length = 195 Score = 240 bits (613), Expect = 2e-62, Method: Composition-based stats. Identities = 75/195 (38%), Positives = 107/195 (54%), Gaps = 3/195 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 L+ + LPGVG K+A+R AFT+L + +A+ L ++ C C Sbjct: 2 YPKTFDDLIYEFQKLPGVGAKTAERYAFTVLSWNEDEISEMAETLINLKKKVKKCTCCGN 61 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 TE E+C C + +R +N ICVV++P DI IE +F+G Y VL G ++ G+ PD Sbjct: 62 LTEDELCEFCKSSKRNQN-IICVVQNPKDISVIESMQEFNGVYHVLDGLINTQKGVLPDQ 120 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + + L +R+ E EVILA +PTVEGE TA YI++L SR+AHG+PVG L+ Sbjct: 121 LNIMSLLKRI-NENTEEVILALDPTVEGETTALYISKLLEGK-CRVSRLAHGIPVGSHLD 178 Query: 183 MVDGTTLSHSLAGRH 197 D TL + GR Sbjct: 179 YTDAMTLLKAFEGRK 193 >UniRef50_B1ZW44 Recombination protein RecR n=3 Tax=Verrucomicrobia RepID=B1ZW44_OPITP Length = 198 Score = 239 bits (610), Expect = 5e-62, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 2/195 (1%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 +L + L+ LPG+G +S++R+A LL L AL A + C C Sbjct: 2 PSAFEKLQQQLKQLPGLGYRSSERIALHLLVEKPQRLPALVAALEEAARTVRRCTRCGNL 61 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 E E+C IC++ RR + +CVVE D+ A+E++G + G Y VL G LSP+ G+GPDD+ Sbjct: 62 AEAELCPICADERRDPS-LVCVVEEVPDLVALERSGAYRGVYHVLHGKLSPMHGVGPDDL 120 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQ-YDVEASRIAHGVPVGGELE 182 + L R+ + E+ILA + VEGEAT +Y+ E + + +RI G+P GG + Sbjct: 121 NVASLLARVESGAVGELILALSNDVEGEATCHYLTEQLKKGKAPQITRIGFGLPSGGGVL 180 Query: 183 MVDGTTLSHSLAGRH 197 D TL +L R Sbjct: 181 YADSVTLKSALDARR 195 >UniRef50_A9GQA8 DNA repair and genetic recombination protein n=2 Tax=Bacteria RepID=A9GQA8_SORC5 Length = 238 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 74/204 (36%), Positives = 109/204 (53%), Gaps = 8/204 (3%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 L+++ + L LPGVG K+AQR A L+ L L I C C Sbjct: 36 PGRLSRVAQLLARLPGVGEKTAQRFALFLVTAGEDTARDLGGELVELCDHIRPCIRCGHI 95 Query: 64 TEQE-----VCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGI 118 E + +C IC + RR + +CVV D+ AIE++G GRYFVL LSPL+G+ Sbjct: 96 AELDDGGRALCAICLDTRR-DGALLCVVARVQDLLAIERSGAMRGRYFVLGRLLSPLEGV 154 Query: 119 GPDDIGLDRLEQRLAE--EKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVP 176 G +++ L+ L R+ + + + EV++AT P+V+GEATA +A ++ +RIA GVP Sbjct: 155 GAEELPLEALRARVRDPEQPVREVLVATPPSVDGEATALLLARELGAMGIQVTRIASGVP 214 Query: 177 VGGELEMVDGTTLSHSLAGRHKIR 200 GG+LE D TL ++ GR Sbjct: 215 HGGDLEFADQVTLGRAIEGRKSFG 238 >UniRef50_B0TY95 Recombination protein recR n=18 Tax=Francisella RepID=RECR_FRAP2 Length = 201 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 90/198 (45%), Positives = 133/198 (67%), Gaps = 2/198 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 SP +T ++E+LR LP +G KS+QR+A LL + + +A +L A I C C++ Sbjct: 6 FSPKITAVIESLRKLPTIGKKSSQRLALYLLDKSPETAITIANSLLDAAENIKKCKYCQS 65 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 TE++VC+IC + R E+ ++C++ES D+ AIE+ G F G+YFVL G +SPLDGIGP++ Sbjct: 66 LTEKDVCDICGSQNRDES-KLCIIESMLDLVAIEEAGFFKGKYFVLNGRISPLDGIGPNE 124 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + LD LEQ + +I E+ILA +PTVEGE TA++I+++ D++ SRI GVP GGELE Sbjct: 125 LKLDILEQIIINREINEIILAISPTVEGETTAHFISQMI-GKDIKISRIGFGVPFGGELE 183 Query: 183 MVDGTTLSHSLAGRHKIR 200 +D TL H+ R I+ Sbjct: 184 YLDQQTLIHAFNARTNIK 201 >UniRef50_D1NBH0 Recombination protein RecR n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NBH0_9BACT Length = 210 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 112/201 (55%), Gaps = 2/201 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 + + +L+ AL+ LPG+G + A+R+A ++L + L + + + +G C +C Sbjct: 5 LSYPDAVEELIGALKQLPGIGRRGAERLALSMLGWEPEKLQYLGKLVETLPATVGSCPEC 64 Query: 61 RTFTE-QEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 + E+C +C P R + +CVVE+ A ++AIE +G F GRY VL G LSPLD Sbjct: 65 GALSNAGELCAVCRLPDR-DRQLVCVVETMAQVFAIEASGNFRGRYHVLGGRLSPLDAEN 123 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 + L++L ++ E+ILA +P VEG ATA Y+AEL V ++ A G+P G Sbjct: 124 GAGLNLEKLIGLARSGQVREIILALSPDVEGRATAIYLAELLRDAPVRVTQPALGLPAGA 183 Query: 180 ELEMVDGTTLSHSLAGRHKIR 200 L DG T++ +L+GR + Sbjct: 184 NLSYADGATIAAALSGRTILG 204 >UniRef50_B3R068 Recombination protein recR n=1 Tax=Candidatus Phytoplasma mali AT RepID=RECR_PHYMT Length = 206 Score = 234 bits (599), Expect = 9e-61, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 117/205 (57%), Gaps = 8/205 (3%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLL-QRDRSGGMRLAQALTRAMSEIGHCAD 59 M+ SP + +L+E+ LPGVG K+A+R F L+ Q++++ + L++ L ++ I C Sbjct: 1 MKNSPTVEKLIESFTLLPGVGKKTAERYTFFLINQKNKNKILYLSKHLKELVNNIKSCNI 60 Query: 60 CRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 C TE+ +CN CS+ +R ++ I +V D+Y E+ + G Y +L G + I Sbjct: 61 CGYITEKNICNFCSDSQR-DHSTIMIVADNRDVYCFEKINHYHGLYHILGGLIDFSRCIK 119 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANY----IAELCAQYDVEASRIAHGV 175 P+++ + L+ RL I E+I+ATN T+EGE TA Y + + ++ +++A+G+ Sbjct: 120 PENLNFNSLKDRLKT--IKEIIIATNSTLEGEITATYSKKFLKKYLKDEKIKITKLAYGI 177 Query: 176 PVGGELEMVDGTTLSHSLAGRHKIR 200 P+G + +D TL +++ R+ + Sbjct: 178 PIGLDFNYLDEKTLCNAINNRNNFK 202 >UniRef50_B8DQU5 Recombination protein recR n=13 Tax=Desulfovibrionales RepID=RECR_DESVM Length = 201 Score = 234 bits (598), Expect = 1e-60, Method: Composition-based stats. Identities = 72/198 (36%), Positives = 109/198 (55%), Gaps = 3/198 (1%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 L L+E L LPG+GPKSA R+A TLL+ S RL +A+ + C C Sbjct: 5 PEPLKALVEQLSRLPGLGPKSALRLAMTLLKWPASETRRLGRAVHDLRDNLHLCGRCGAL 64 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 T+ + C IC++P R +C+V + +E+ G + G+Y +L G L+PLD + D + Sbjct: 65 TDVDPCGICTDPARS-GETLCLVSEWDSLLTLEEGGFYKGQYLILGGLLAPLDNLHADSL 123 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELC--AQYDVEASRIAHGVPVGGEL 181 LDRL +R+AE + EV++A TVE E TA YI + V +R+A G+P+G E+ Sbjct: 124 ELDRLTKRMAEGTVREVVMALGTTVEAENTATYIRNMIVRQYPQVRVTRLAQGIPLGSEV 183 Query: 182 EMVDGTTLSHSLAGRHKI 199 + +D TL S+ R + Sbjct: 184 KFMDRETLRQSMQYRQDL 201 >UniRef50_Q0BVJ5 Recombination protein recR n=184 Tax=Bacteria RepID=RECR_GRABC Length = 202 Score = 233 bits (595), Expect = 3e-60, Method: Composition-based stats. Identities = 76/194 (39%), Positives = 112/194 (57%), Gaps = 7/194 (3%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M L QL+ L LPG+GP+SA+R A LLQ+ + + LA A+ A + C C Sbjct: 1 MGGPE-LEQLIALLARLPGLGPRSARRAALRLLQQPETRLLPLAAAMQNAARAVKTCRVC 59 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 + C++C++P R+ NG ICVVES D++A+++ G + G Y VL G LS L G GP Sbjct: 60 GNLDSADPCSVCTDPSRE-NGLICVVESVGDLWAMDRAGIYRGLYHVLGGVLSALAGTGP 118 Query: 121 DDIGLDRLEQRLAEE-----KITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGV 175 D + L +R+ +TEVILA TV+G TA+++AE V +R+A G+ Sbjct: 119 DALNWPALMRRIESSRPSATPVTEVILALGATVDGATTAHWLAEQLRPMGVSVTRLAQGI 178 Query: 176 PVGGELEMVDGTTL 189 P+GG L+++D TL Sbjct: 179 PIGGALDVLDDGTL 192 >UniRef50_O67455 Recombination protein recR n=3 Tax=Aquificales RepID=RECR_AQUAE Length = 211 Score = 231 bits (591), Expect = 8e-60, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 115/197 (58%), Gaps = 3/197 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 L + +E ++ +P G + A R + LL+ ++ + + + A+ + C +C Sbjct: 16 FPKSLKEALEGIKEIPTYGERGASRFMYNLLKLEKEKRKEIIEKVLEAVEVLRPCRECFL 75 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 T++EVC ICS+ +R + ICVVE D YAIE+ ++ G Y VL GH++PL+GI +D Sbjct: 76 ITDREVCPICSDEKRSKKF-ICVVEESQDAYAIEKLERYKGVYHVLQGHIAPLEGISAED 134 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQY--DVEASRIAHGVPVGGE 180 + +D L +R+ + + EVILATNP VEGEATANYIA L + V+ +R A+G G Sbjct: 135 LTIDALMERIKKYQPKEVILATNPNVEGEATANYIAGLIRRKFPAVKITRTAYGFQFGSL 194 Query: 181 LEMVDGTTLSHSLAGRH 197 +E VD +L S+ R Sbjct: 195 IEFVDEYSLEKSMENRK 211 >UniRef50_Q3KMC2 Recombination protein recR n=12 Tax=Chlamydiaceae RepID=RECR_CHLTA Length = 200 Score = 231 bits (589), Expect = 1e-59, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 117/199 (58%), Gaps = 4/199 (2%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 ++ +++L+ L+ LPG+G KSA+++AF LL+ D S +AQAL + C++C Sbjct: 2 LKYPDYISKLISFLKKLPGIGFKSAEKIAFELLEWDPSQIEAMAQALQEFSTSHATCSNC 61 Query: 61 RTF--TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGI 118 ++ CN CS R ++ +C+V +P D++A+E++ F G YFVL LSP+ G Sbjct: 62 FCLKISQTSPCNFCSESR--DSSSLCIVATPKDVFALEKSKIFKGHYFVLGNLLSPITGK 119 Query: 119 GPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVG 178 L L+QR+ E+I+A + T+EG+ATA ++ + + ++ SR+A G+PVG Sbjct: 120 HLSLEKLAILKQRIEACSPKEMIIALDATLEGDATALFLKQEFSYLPIKISRLALGMPVG 179 Query: 179 GELEMVDGTTLSHSLAGRH 197 + VD TL+ + +GR+ Sbjct: 180 LSFDFVDANTLARAFSGRN 198 >UniRef50_Q4FNA8 Recombination protein recR n=5 Tax=root RepID=RECR_PELUB Length = 203 Score = 231 bits (589), Expect = 1e-59, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 112/201 (55%), Gaps = 3/201 (1%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 MQ + +L++ + LPG+GPKSA+R+ L+ +A L + + C C Sbjct: 1 MQNINEIEELIKLISKLPGLGPKSAKRIVLKLINNRDELVKPMANTLAQVYKNVIRCQSC 60 Query: 61 RTFTEQEV-CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 T + CN C N + ++ +ICVVE AD ++IE + + G + +L G +S G Sbjct: 61 GTLKSNSLGCNNCENSK-EKYNKICVVEDIADQWSIENSNIYKGYFHILGGTIS-SAGQR 118 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGG 179 +D+ ++ L +R++ E I EVILAT+ TVEG+ TA YI + + + +++A G+PVGG Sbjct: 119 KEDLLINSLVERVSRENIEEVILATSATVEGQTTAYYIEDSLKKTSTKVTKLAQGLPVGG 178 Query: 180 ELEMVDGTTLSHSLAGRHKIR 200 E+E +D TL + R I+ Sbjct: 179 EIESLDDGTLYSAFKNRTGIK 199 >UniRef50_Q1MPV5 Recombinational DNA repair protein (RecF pathway) ref|ZP_00131299.1| 353: Recombinational DNA repair protein (RecF pathway) n=2 Tax=Desulfovibrionaceae RepID=Q1MPV5_LAWIP Length = 203 Score = 231 bits (589), Expect = 1e-59, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 113/198 (57%), Gaps = 3/198 (1%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 +L ++ L LPG+GPKSA R+A T L+ S L +++ ++G C+ C Sbjct: 6 PEILRTVIGQLTKLPGLGPKSAMRIAMTFLKWPESETRSLGKSIYELRDKLGLCSSCGAL 65 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 ++ +C +C++ R +N +C+V + +E+ G F GRY +L G L+PLD +G D + Sbjct: 66 SDSNLCFVCADSERLDN-LLCIVSEWDSMVTLEEVGFFQGRYMILGGLLAPLDNMGLDKL 124 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYD--VEASRIAHGVPVGGEL 181 +DRL RL + ++ EVILA T+E E TA I L ++ + +R+A G+P+G E+ Sbjct: 125 EIDRLIDRLNKGEVKEVILALGSTIEAETTATMIYSLISKRFPYIRVTRLAQGIPLGAEV 184 Query: 182 EMVDGTTLSHSLAGRHKI 199 + +D TL SL R ++ Sbjct: 185 KFMDRETLRQSLQYRQEL 202 >UniRef50_A5CCA2 Recombination protein recR n=17 Tax=Rickettsieae RepID=RECR_ORITB Length = 203 Score = 226 bits (576), Expect = 5e-58, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 111/197 (56%), Gaps = 2/197 (1%) Query: 2 QTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCR 61 + S ++ +L+ + LPG+G +SA+R+ L+Q L LT ++ I C C Sbjct: 3 KDSNIIEELIFSFAQLPGLGNRSARRIVLYLMQDKEVRIKNLNNQLTSVLNNIMECDYCG 62 Query: 62 TFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG-P 120 +CNIC + R ++ I +VES AD++A+E++ F G Y VL LS + G Sbjct: 63 NLDVVSICNICRHSER-DSSIIAIVESVADLWALERSKVFKGWYHVLGKTLSAVSGNDAI 121 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + + L +L R+ E K+ E+ILATN T++G+ TA ++ + +++ S++A G+P+GGE Sbjct: 122 NSLKLPKLLNRIREYKVQEIILATNSTIDGQMTAFFVIDYLKDENLKISKLASGIPLGGE 181 Query: 181 LEMVDGTTLSHSLAGRH 197 L+ +D TL + R Sbjct: 182 LDYLDEGTLLAAFKARQ 198 >UniRef50_B1AI75 Recombination protein recR n=15 Tax=Ureaplasma RepID=RECR_UREP2 Length = 201 Score = 224 bits (572), Expect = 1e-57, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 2/201 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M L++AL+ LPGVG K+A + AF LLQ+D+ L + + A + I C C Sbjct: 1 MSKPVEFEMLVDALKSLPGVGTKNANKWAFFLLQQDQKYIDDLIKRIKEAKTNILKCKYC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 FT ++ C+IC N R + ++ +V + D+ IE ++G Y + G +S + Sbjct: 61 ANFTNKDECDICLNEYR-DFTKLMIVTTNEDLERIESANIYNGLYHITNGEISLRKNVVI 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQ-YDVEASRIAHGVPVGG 179 + + +++R+ E+I+AT+ T +GE TA+YI + D++ RI G+P+ Sbjct: 120 EHTNIKTIKERVLNGSFKEIIIATSYTHDGEVTADYIIRMLEDIKDLQIYRIGFGIPLNS 179 Query: 180 ELEMVDGTTLSHSLAGRHKIR 200 ++ D TL SL + KIR Sbjct: 180 SIDYADDETLKQSLINKRKIR 200 >UniRef50_D0W4J6 Recombination protein RecR n=3 Tax=Neisseriaceae RepID=D0W4J6_NEICI Length = 206 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 81/203 (39%), Positives = 120/203 (59%), Gaps = 4/203 (1%) Query: 1 MQTSP---LLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHC 57 M +L+ AL+ LP VGPKSAQR+A+ LLQ R L AL A+ ++ HC Sbjct: 1 MMNPKKQDAFQRLIGALKVLPNVGPKSAQRIAYHLLQHKRKEAEELVDALQTALRQVDHC 60 Query: 58 ADCRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDG 117 + C TF E +C+IC++P R ++ +V PAD+ +E G YFVLMG ++ G Sbjct: 61 SMCNTFCEGGLCSICADPSRDVR-KLMIVHMPADVSNMEAANCHDGLYFVLMGQINTALG 119 Query: 118 IGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPV 177 + I LD+L +RL +E+I E+I+AT T EG ATA ++E + + SR++ G+P+ Sbjct: 120 MDVSAIALDKLAERLKKEEIEEIIIATAFTAEGNATAFVLSEFFKKLPYKISRLSQGIPL 179 Query: 178 GGELEMVDGTTLSHSLAGRHKIR 200 GGELE VD TL+ ++ R I+ Sbjct: 180 GGELEYVDAGTLAQAVYERRLIK 202 >UniRef50_A4BJR1 Recombination protein RecR n=1 Tax=Reinekea blandensis MED297 RepID=A4BJR1_9GAMM Length = 203 Score = 221 bits (565), Expect = 9e-57, Method: Composition-based stats. Identities = 78/201 (38%), Positives = 119/201 (59%), Gaps = 1/201 (0%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M +P +L++AL+ LPGVG +SAQRMA LL+R+ G RL+ AL+ A++ + C C Sbjct: 1 MAFTPATEKLIQALQALPGVGVRSAQRMALQLLEREPETGQRLSSALSDALTLVHKCPQC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 RT TE ++C +C+NP R + ICVV S D IE + F GRYFVL G LSP+DGIGP Sbjct: 61 RTLTEDDLCGVCANPDR-DASVICVVASDVDRAGIEMSAAFQGRYFVLHGVLSPIDGIGP 119 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + +GL L + +++E++LA + +E EAT ++I E + + +R+ G Sbjct: 120 ETLGLVELVELARSGEVSEIMLALDDRLESEATVHFIKEQFKESGLTVTRVPFHQMKSGA 179 Query: 181 LEMVDGTTLSHSLAGRHKIRF 201 L+ D + +L + + F Sbjct: 180 LDQADSRVIEQALTQKQTLGF 200 >UniRef50_Q7NAN7 RecR n=2 Tax=Mycoplasma gallisepticum RepID=Q7NAN7_MYCGA Length = 213 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 55/196 (28%), Positives = 101/196 (51%), Gaps = 1/196 (0%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 L+E + LP V K A+++ L+ + L L RA I C C+ ++ Sbjct: 15 NEFNNLVEQISDLPSVSKKQAKKITQYLMTKSDRYVYDLIDVLKRAKLSIKICEMCQGWS 74 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 + +C+ICS+ R N ++C+V D+ IE++ + G+YF+L +S + ++I Sbjct: 75 NRSICSICSDESRN-NNELCIVSFFDDLNVIEESQAYHGKYFILNHEISKKNKRIIEEIN 133 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 D L + ++KI +VI+ATN T +G+ TANY+ L +D++ R+ G+P ++ Sbjct: 134 FDLLLDLIKKQKIEKVIIATNFTQDGQTTANYLRFLLDDFDLKIYRLGMGLPYNSSIDYA 193 Query: 185 DGTTLSHSLAGRHKIR 200 D +L + + I+ Sbjct: 194 DSFSLKGAFENKQLIK 209 >UniRef50_B9L9M2 Recombination protein RecR n=1 Tax=Nautilia profundicola AmH RepID=B9L9M2_NAUPA Length = 187 Score = 212 bits (540), Expect = 7e-54, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 112/199 (56%), Gaps = 12/199 (6%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ + +L+EA LP +G KSA R+A ++ + D+ ++L A+ ++ I C C Sbjct: 1 MKDLHSINRLIEAFEELPSIGKKSATRLALSIAK-DKFKALKLINAIEDVVANIKECEIC 59 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 F+E E+C+IC++ R + + +VE+ DI IE++G ++G YFVL Sbjct: 60 GNFSEHEICDICASENRDK--TLAIVENSKDIMIIEESGSYNGYYFVL---------THI 108 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 DD + +L + + +++I EVI A P+VE EA + YI + ++E ++IA GVP G Sbjct: 109 DDEVIQKLREIIKDKEIKEVIFAFPPSVESEARSLYIEDKLKDLNIEFTQIAQGVPTGVH 168 Query: 181 LEMVDGTTLSHSLAGRHKI 199 E VD +L+ ++ R K+ Sbjct: 169 FENVDVNSLAKAIKLRFKL 187 >UniRef50_B4U725 Recombination protein RecR n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U725_HYDS0 Length = 223 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 112/217 (51%), Gaps = 26/217 (11%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTF 63 L + +E ++ +PG G K+A R + L+ D+ + ++L I C +C Sbjct: 8 PRNLLKALENIKHIPGYGEKNASRFVYGFLKLDKIKKEDIVKSLENLF-SITTCKECNIL 66 Query: 64 TEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDI 123 T+QEVC ICSNP+R + I VVE D Y IE+ +F G Y +L G +SPL+GI P+D+ Sbjct: 67 TDQEVCAICSNPKRSKK-YIAVVEESQDAYKIEKLERFKGVYHILGGRISPLEGIAPEDL 125 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDV----------------- 166 ++ L++R+ + E+I+ATNP EGEATANY+ ++ + Sbjct: 126 SIELLKERIRKYNPKEIIIATNPNPEGEATANYLIKIIKSLNNKSATSMPRTTSMPRTTS 185 Query: 167 -------EASRIAHGVPVGGELEMVDGTTLSHSLAGR 196 + +RIA + G +E VD +L S+ R Sbjct: 186 LPRSTTPKITRIATAIQFGTLIEYVDDLSLEESIEKR 222 >UniRef50_C8PFQ8 Recombination protein RecR n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PFQ8_9PROT Length = 189 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 57/199 (28%), Positives = 100/199 (50%), Gaps = 10/199 (5%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M + +L+ + LPGVG KSA R A+ + ++ G+ LA + A+ + C C Sbjct: 1 MSGTDRFEELVASFEKLPGVGKKSALRFAYYVSVQNSFLGLNLAHNIEEAVRGLHRCRIC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 E E+C C++ R+ + +IC+VE+P DI+ +E ++GRYFVL Sbjct: 61 GAVCEGEICEYCADDERE-SDKICIVENPKDIFILESNKIYNGRYFVLD---------AA 110 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 D+ + L + ++ E+I A P + + Y+ + A ++ +++A GVP G Sbjct: 111 DEDKIAALREMVSRNGARELIFALTPGINSDGIMLYVEDKLADLSLKFTKLAQGVPTGVS 170 Query: 181 LEMVDGTTLSHSLAGRHKI 199 L+ VD +L ++ GR I Sbjct: 171 LDNVDMLSLIKAINGRTDI 189 >UniRef50_Q98RF8 Recombination protein recR n=1 Tax=Mycoplasma pulmonis RepID=RECR_MYCPU Length = 191 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 102/197 (51%), Gaps = 6/197 (3%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ + L+ L+ LPGVG K A++++F LL+++ + ++ ++ I C +C Sbjct: 1 MKN-QYIDNLILNLKKLPGVGTKQAEKISFFLLKQNENEVEQIINSIVDLKKNIKECQNC 59 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 +C+ C + R + Q+ + E+ +D E+ G + G+YF++ + + Sbjct: 60 NFLQSNNICHFCMDKSRNK--QLMIFETTSDALKFEKLGIYRGKYFIIKNLIENVKNANE 117 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 D+L + E+I+A NPT+EG+ T+NYI + + ++ +++A G+P+ + Sbjct: 118 PKWK-DKLLHYASN--FEEIIIALNPTIEGQITSNYIKVILEEVALKVTKLAQGLPINSQ 174 Query: 181 LEMVDGTTLSHSLAGRH 197 ++ +D TL+ S R Sbjct: 175 IDYIDPITLNLSFENRK 191 >UniRef50_Q2STA5 DNA repair protein RecM n=5 Tax=Mollicutes RepID=Q2STA5_MYCCT Length = 196 Score = 209 bits (532), Expect = 5e-53, Method: Composition-based stats. Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 4/194 (2%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 + +++E++R G+ K+++R+ LL ++ L + I C C + Sbjct: 4 SIFNEIVESIRTNEGLTKKTSERLLVNLL-LNKDKLDEFINQLNKVNQLISTCKICGYLS 62 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 E C +CS R +N IC+V + D IE ++ G Y +L G ++ I D + Sbjct: 63 ENNKCLVCSLDNRNQN-TICIVSTILDAKNIENANKYKGVYHILNGEINLNKNITFDKLN 121 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 + + +R+ ++ TE+ILA N T EGE TANY+ +L + +++ +R+A G+P+G L+ + Sbjct: 122 ISSIFKRINDD--TEIILALNSTFEGELTANYLYKLLSTKNIKITRLAKGIPMGASLDYM 179 Query: 185 DGTTLSHSLAGRHK 198 D TL + R K Sbjct: 180 DEFTLQSAFINRKK 193 >UniRef50_C4XFW1 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XFW1_MYCFE Length = 196 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 100/199 (50%), Gaps = 4/199 (2%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ + +L + L +PG+ K A +M+ L++D+ L +++ + I +C+ C Sbjct: 1 MK-IETIEKLNQVLTTIPGISKKQADKMSNFFLKQDQEYIDNLVKSINDLKTNISYCSIC 59 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 E C +C + R + +VE+ A + I+ ++G Y+VL + + Sbjct: 60 NFLKEGGKCLVCDDKSRY--NFLMIVENAATLRKIDDMNFYNGYYYVLPYLFNLKNNKEI 117 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELC-AQYDVEASRIAHGVPVGG 179 + L + +K EVI+ +P++EGE T ++ +L +Q+ ++ +R A G+P+G Sbjct: 118 KNYDYKELINYIQHKKFDEVIIVLSPSLEGEMTTGHLLKLINSQFKIKVTRAAIGMPMGS 177 Query: 180 ELEMVDGTTLSHSLAGRHK 198 LE +D T+ S+ R+K Sbjct: 178 NLEYLDTFTIKQSIENRNK 196 >UniRef50_C3XMA4 Recombination protein RecR n=3 Tax=Helicobacter RepID=C3XMA4_9HELI Length = 190 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 62/198 (31%), Positives = 110/198 (55%), Gaps = 10/198 (5%) Query: 2 QTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCR 61 +L+E+L +P VG KSA R+A+ L D+ +++A + + E+ C +C Sbjct: 3 SYPESFAKLVESLERIPSVGRKSAMRLAYFLAFEDKFSALQVAHNIECCVQELRTCEECG 62 Query: 62 TFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 T Q VC IC + R NG++C+V +P +I+ +E++G+F G+YFVL D Sbjct: 63 GITNQAVCEICLDATRN-NGELCIVANPREIFLLEESGEFFGKYFVLDSL---------D 112 Query: 122 DIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGEL 181 + L++LE+ + + ITE+I A +P++ ++ Y+ + + + ++IA G+P G L Sbjct: 113 KLNLEQLERSVTKFGITEIIFAFSPSLGSDSIMLYLEDKLENFGLRFTKIAQGIPTGVSL 172 Query: 182 EMVDGTTLSHSLAGRHKI 199 E VD ++ +L R KI Sbjct: 173 ENVDQLSIIRALQSRVKI 190 >UniRef50_A1W0P8 Recombination protein recR n=21 Tax=Epsilonproteobacteria RepID=RECR_CAMJJ Length = 190 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 110/199 (55%), Gaps = 10/199 (5%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 ++ +L+E+ LP +G K+A R+A+ L ++ GM+LA + A+ I C C Sbjct: 2 VKGLEKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLAHNIENAIRFIKPCEQC 61 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 +E E+C ICS+ R +N +C+VESP DI +E++ ++G YFVL Sbjct: 62 GALSENELCEICSDEERNKN-ILCIVESPKDILTLEESQSYNGLYFVLDEL--------- 111 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 ++ L++L+Q + + I+E+I A ++ +AT +I + ++ S+IA G+P G Sbjct: 112 NEEKLEKLKQIILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFSKIAQGIPSGVN 171 Query: 181 LEMVDGTTLSHSLAGRHKI 199 LE VD +L+ ++ R KI Sbjct: 172 LENVDLISLNKAMNFRTKI 190 >UniRef50_Q17WX2 Recombination protein recR n=17 Tax=Helicobacter RepID=RECR_HELAH Length = 193 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 10/197 (5%) Query: 2 QTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCR 61 + L++ L +P VG KSA +MA+ L + ++L AL A+ + C C Sbjct: 6 NSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKLTHALENALENLKTCTSCN 65 Query: 62 TFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 +E E+C ICS+ R +N Q+C+V P D++ +E F GRY VL + Sbjct: 66 ALSESEICEICSDESR-QNSQLCMVLHPRDVFILEDLKDFLGRYHVLN---------SIE 115 Query: 122 DIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGEL 181 ++ + LE+RL +EKI E+I A PT+ ++ YI + + ++IA GVP G Sbjct: 116 NVDFNALEKRLIKEKIKEIIFAFPPTLANDSLMLYIEDKLQHCHLTFTKIAQGVPAGVNF 175 Query: 182 EMVDGTTLSHSLAGRHK 198 E +D +LS + R K Sbjct: 176 ENIDSVSLSRAFNSRIK 192 >UniRef50_Q8EUW2 Recombinational DNA repair protein RecR n=1 Tax=Mycoplasma penetrans RepID=Q8EUW2_MYCPE Length = 201 Score = 203 bits (518), Expect = 2e-51, Method: Composition-based stats. Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 5/202 (2%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M+ +EAL+ LP + K+A ++A+ L+ D + LT S I C +C Sbjct: 1 MK-PKEFEYFVEALKSLPTISNKNASKIAYFFLEADEVFYSQFLDRLTSLKSNIKFCLNC 59 Query: 61 RTFTEQEV-CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIG 119 T + C+IC+ R +N ++C+V D+ IE + FSG YFVL + D Sbjct: 60 NNLTSDSLYCDICNTDSRDKN-KLCIVSYLEDLEKIEASNSFSGLYFVLNTEIKHKDLKT 118 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEA--SRIAHGVPV 177 I L++LE + + + E+++ TN T++GE T++YI + + R+A G+P+ Sbjct: 119 AKKINLEKLENMINKFHVREILICTNMTIDGELTSSYIKNFIKEKNYNIDLYRLALGIPM 178 Query: 178 GGELEMVDGTTLSHSLAGRHKI 199 +E +D +L +S+ + KI Sbjct: 179 NASIEYIDWESLKYSIENKRKI 200 >UniRef50_A8EUC6 Recombination protein RecR n=6 Tax=Campylobacteraceae RepID=A8EUC6_ARCB4 Length = 190 Score = 202 bits (515), Expect = 5e-51, Method: Composition-based stats. Identities = 60/198 (30%), Positives = 108/198 (54%), Gaps = 10/198 (5%) Query: 2 QTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCR 61 + +L+EA LP +G KSA R+A+ ++ D G+++A ++ A+ I C+ C Sbjct: 3 KGLEKFYELVEAFESLPTIGKKSALRLAYHIVMNDNYCGIKIAHSIENALKNITKCSRCG 62 Query: 62 TFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 + +E E+C C + R +N ++C+V+S DI+ IE + QF GRYFV+ D Sbjct: 63 SMSEHEICEFCLDENR-DNEKLCIVQSAKDIFVIEDSNQFDGRYFVIEEL---------D 112 Query: 122 DIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGEL 181 LD L++ + + ++ A P++ +A +I + +D++ ++IA GVP G L Sbjct: 113 QDVLDSLQRFILNNGVKTILFAITPSIANDAFILFIEDKLKDFDIKFTKIAQGVPTGVSL 172 Query: 182 EMVDGTTLSHSLAGRHKI 199 E VD +LS ++ + +I Sbjct: 173 ENVDILSLSKAIQSKVEI 190 >UniRef50_Q6KIL5 Recombination protein n=1 Tax=Mycoplasma mobile RepID=Q6KIL5_MYCMO Length = 196 Score = 202 bits (514), Expect = 7e-51, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 105/200 (52%), Gaps = 7/200 (3%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M L+ +L+ LPG+ K A++++F ++Q + L A +A S + C +C Sbjct: 1 MNN-KTFENLVLSLKELPGISKKQAEKISFYIIQSKKDVLNNLIDAFQKAKSNLVKCNNC 59 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 +E ++C+IC + R ++ VVES ++ E +SG+YFV+ + D Sbjct: 60 NLISEHQLCSICIDKSRD--NKLMVVESSLEVNKFEDLQIYSGKYFVVDSLIKNFDDKST 117 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQY--DVEASRIAHGVPVG 178 +++ + L EVILA +PT+EGE +A YI L + +++ S++A+G+PVG Sbjct: 118 YFETYNKIFKILPN--ADEVILALSPTLEGEVSAIYIKNLINEKFPNLKISQLANGLPVG 175 Query: 179 GELEMVDGTTLSHSLAGRHK 198 ++E +D TL+ + R Sbjct: 176 SQVEYIDSLTLNFAFKNRKD 195 >UniRef50_Q30R19 DNA replication and repair protein RecR n=4 Tax=Epsilonproteobacteria RepID=Q30R19_SULDN Length = 189 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 104/195 (53%), Gaps = 11/195 (5%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 +L+EA + LP +G KSA R+A+ ++ ++ G+++A A+ A+ I CA C + Sbjct: 6 EKFNKLVEAFQELPTIGKKSAIRLAYHIVMKNSFVGIKIAHAIEEALGSIKQCAACGGMS 65 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 E E+C IC + R E +C+VE+ DI +E+ F GRYFVL ++ Sbjct: 66 EDELCFICCDESRDET-LLCIVENAKDILLLEENRLFDGRYFVLDSL---------ENFN 115 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 L LE + + E++ A P++ +A YI + + + + S+IA GVP G LE + Sbjct: 116 LSGLESLVKNG-VEEIVFALTPSIANDAVILYIEDKLSDFTINFSKIAQGVPTGVSLENI 174 Query: 185 DGTTLSHSLAGRHKI 199 D +LS +L R K+ Sbjct: 175 DLLSLSRALIDRVKV 189 >UniRef50_A5IZC7 Recombination protein RecR n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IZC7_MYCAP Length = 195 Score = 200 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 2/196 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 + +L + L +P + K A+++A +L+ + + + + +IG C C Sbjct: 2 NIKTIDELTKKLLSIPTITKKQAEKLADYILKSPKDEIKQTLEYILETKDKIGFCEKCNF 61 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 E C C R + VVES A + I T ++G +FVL LS D Sbjct: 62 IVENGKCANC--DRFNLWNTLIVVESVASVKKIFDTDFYNGYFFVLPYLLSMSPKNAKVD 119 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELE 182 + L + +KITEVI+ +PT+EG+ T + ++C + DV+ +R A G+P+ +E Sbjct: 120 FNYEHLVNFIKTKKITEVIIVLSPTIEGQMTTAQLMQICREIDVKVTRAAVGLPLNANIE 179 Query: 183 MVDGTTLSHSLAGRHK 198 +D T+ ++ R K Sbjct: 180 YIDEFTIKQAIENRTK 195 >UniRef50_Q4A6Z7 Putative recombination protein n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A6Z7_MYCS5 Length = 194 Score = 197 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 4/198 (2%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M L+ + + +R +PG+ K A+++ +L L+ + I C+ C Sbjct: 1 MFNLSLIEEFITKIRKIPGISRKQAEKIVAWILYSKDDEIYELSNYFKKLKDNISFCSFC 60 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 E C IC++ R+ ++ VVE+P I +E+ F G+YFV + + Sbjct: 61 NIPQENNNCYICNDTSRE--NKLLVVENPLIIEKLEKLSLFKGKYFVFKNLVKNEKSLDK 118 Query: 121 DDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGE 180 + L +L + EVI +PT+EGE T N I + ++ + +S++A G+P+G Sbjct: 119 FYLDLSKLLKYCKN--FEEVIFGISPTLEGEVTTNLIRKEFEKFQINSSQLAIGIPIGAS 176 Query: 181 LEMVDGTTLSHSLAGRHK 198 ++ +D TL S+ R K Sbjct: 177 IDYMDEITLKFSIKNRQK 194 >UniRef50_Q4A8A7 Recombination protein recR n=4 Tax=Mycoplasma RepID=Q4A8A7_MYCH7 Length = 194 Score = 192 bits (488), Expect = 8e-48, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 6/195 (3%) Query: 5 PLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFT 64 L E LR +PG+ K A R+ L+ +A+ +C C Sbjct: 4 ETFKNLAEDLRKIPGISKKQAMRILSFLVDVPIEKIENFVRAICDLKKNTQYCEKCGYLN 63 Query: 65 EQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIG 124 VC IC + +R + +I VVE+ I E+ G++ G+YFV + + + + Sbjct: 64 TNPVCEICLDFQR--SFKILVVENTEMIAKFEEYGKYDGQYFVFGKY--DIKNLENHNAQ 119 Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 + +L A + +E+IL + T+EG ANY+A+ ++ +R+A G+P G ++ + Sbjct: 120 IKKLADLAANK--SEIILGLSSTMEGLIFANYLAKHEFLSGLKITRLATGIPFGAIIDYI 177 Query: 185 DGTTLSHSLAGRHKI 199 D TL +L R ++ Sbjct: 178 DNITLDQALKNRQEM 192 >UniRef50_B3PM36 Recombination protein RecR n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM36_MYCA5 Length = 196 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 6/199 (3%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRT 62 LL +L L+ + G+ K + +L + +A + + C C Sbjct: 2 YDELLNKLTIKLKAIQGLNKKQITAIVEYILNAESGELDDIAMLIKTIKTTYKKCLFCNN 61 Query: 63 FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDD 122 F+ QE C ICS+ R+ ++ VVE+ I E + G+YF+L +P + Sbjct: 62 FSSQEKCEICSDSTRE--NKLMVVENAKTIKQFEVAQIYRGKYFILEALYNPKKPNLLFN 119 Query: 123 IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYD--VEASRIAHGVPVGGE 180 L++L L K EV+LA +PT+EG T +Y+ + + ++A G+P+G Sbjct: 120 KNLEKLL--LIATKANEVVLALSPTIEGAITMDYLKKSLRDANNMHNVYQLATGIPLGVN 177 Query: 181 LEMVDGTTLSHSLAGRHKI 199 +E +D TL S + K Sbjct: 178 VEYIDSETLKQSFLKKTKF 196 >UniRef50_Q14QH4 Putative recombination protein recr dna repair n=1 Tax=Spiroplasma citri RepID=Q14QH4_SPICI Length = 174 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 58/164 (35%), Positives = 84/164 (51%), Gaps = 2/164 (1%) Query: 13 ALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEVCNIC 72 L+ + GVG K+A+R+ F L S L + C C T + VC C Sbjct: 2 ELKTILGVGKKTAERI-FNKLIIKPSLLQTLEHVFNEIKNNYHQCPICSTLMQNNVCLFC 60 Query: 73 SNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRL 132 N R + ++CVV + DI IE T F+G Y VL G ++ +GI PD + LE R+ Sbjct: 61 HNDLRDQT-KLCVVSNFFDIIKIEATKVFNGVYHVLNGEINVKNGITPDKMTFPVLESRM 119 Query: 133 AEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVP 176 ++ I EVI+A T EGE TA Y+ +D++ SR+A G+P Sbjct: 120 NDKIIKEVIIAVGATFEGEVTAQYLKTFLQSFDIKISRLAQGIP 163 >UniRef50_D1J7N4 Recombination protein recR n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7N4_MYCHP Length = 196 Score = 182 bits (464), Expect = 5e-45, Method: Composition-based stats. Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 11/203 (5%) Query: 1 MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADC 60 M + +L E L+ + K +Q+ F + + ++ + + I C C Sbjct: 1 MNNIE-IQKLEELLKTVFDFTKKQSQKFIFNIFKSSSEDIDQICNQIKALRNSIKKCNIC 59 Query: 61 RTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGP 120 + E +CNIC + R + Q+ +V + DI E G + G+YFV ++S + Sbjct: 60 NRYNENTICNICLDTNRTK--QLMLVGNSLDIDKFENIGLYKGKYFVFDQNISLKN---- 113 Query: 121 DDIGLDRLEQRLAE--EKITEVILATNPTVEGEATANYIAELCAQY--DVEASRIAHGVP 176 +D + L ++L + + E+IL+ +PT+EG+ +YI + +++ G+P Sbjct: 114 EDFIVSSLLEKLIDILKDKNELILSLSPTIEGQFNMHYIKKFLKNKINFTNVFQLSTGIP 173 Query: 177 VGGELEMVDGTTLSHSLAGRHKI 199 +G +E +D TL SL + K+ Sbjct: 174 LGSSVEYIDQDTLKESLLNKIKM 196 >UniRef50_B1VIS4 Recombination protein n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VIS4_CORU7 Length = 273 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 50/131 (38%), Positives = 74/131 (56%), Gaps = 2/131 (1%) Query: 3 TSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDR-SGGMRLAQALTRAMSEIGHCADCR 61 L +++ LPG+GPKSAQR+A LL+ R L S + C C Sbjct: 2 FEGPLQDVIDEFASLPGIGPKSAQRIALHLLENATGEDIERFQATLGNLHSGVAFCRICH 61 Query: 62 TFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPD 121 ++++VC IC++ R + +CVVE P DI IE+TG++ GRY VL G L PL+G+GP Sbjct: 62 NISQEDVCRICADSSR-DASLVCVVEEPKDIQVIERTGEYRGRYHVLGGALDPLNGVGPG 120 Query: 122 DIGLDRLEQRL 132 ++ + L QR+ Sbjct: 121 ELNVTALVQRI 131 Score = 110 bits (275), Expect = 4e-23, Method: Composition-based stats. Identities = 33/74 (44%), Positives = 50/74 (67%), Gaps = 1/74 (1%) Query: 129 EQRLAEEKITEVILATNPTVEGEATANYIAELCAQY-DVEASRIAHGVPVGGELEMVDGT 187 + +ITEVI+AT+P EGEATA+Y+ L ++ + SR+A G+P+GG+LE VD Sbjct: 200 VEYREAPEITEVIIATDPNTEGEATASYLGRLLKEFPGLTVSRLASGIPMGGDLEFVDEL 259 Query: 188 TLSHSLAGRHKIRF 201 TLS + AGR +++ Sbjct: 260 TLSRAFAGRTQLKL 273 >UniRef50_Q8R979 Topoisomerase n=14 Tax=Bacteria RepID=RGYR_THETN Length = 1117 Score = 71.2 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 45/122 (36%) Query: 52 SEIGHCADCRT-FTEQEV-CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLM 109 + I C+ C FT++ C C++ + + +I E+ DI A+E Sbjct: 629 NSIKRCSSCGAQFTDELPRCPYCNSDKIDDKKKIL--EALRDI-AME------------- 672 Query: 110 GHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEAS 169 + EVI+AT+P VEGE I++ + Sbjct: 673 ---------------------------VDEVIIATDPDVEGEKIGWDISQYIKPVNKNVQ 705 Query: 170 RI 171 RI Sbjct: 706 RI 707 >UniRef50_B9MRC8 Reverse gyrase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MRC8_ANATD Length = 1122 Score = 54.3 bits (130), Expect = 2e-06, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 45/122 (36%) Query: 52 SEIGHCADCRT-FTEQ-EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLM 109 + I C C T FT++ + C C++ + +I Sbjct: 635 NSIKRCMKCNTQFTDELDSCPKCASNTIDDKKEI-------------------------- 668 Query: 110 GHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEAS 169 L L + ++ EV++AT+P VEGE + I++ + Sbjct: 669 ---------------LKTLREL--ALEVDEVLIATDPDVEGEKISWDISQYIKPANSNIK 711 Query: 170 RI 171 RI Sbjct: 712 RI 713 >UniRef50_A4XJT7 Reverse gyrase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XJT7_CALS8 Length = 1121 Score = 52.4 bits (125), Expect = 9e-06, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 41/122 (33%), Gaps = 45/122 (36%) Query: 52 SEIGHCADCRT-FTEQ-EVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLM 109 + I C C T FT++ C C + + + +I V +I A Sbjct: 634 NSIKRCTSCGTQFTDEYSSCPKCGSDKIDDKKEILKV--LREIAA--------------- 676 Query: 110 GHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEAS 169 ++ E+++AT+P VEGE + I++ + Sbjct: 677 --------------------------EVDEILVATDPDVEGEKISWDISQYLKPVNPNLR 710 Query: 170 RI 171 RI Sbjct: 711 RI 712 >UniRef50_A9FRC6 DNA topoisomerase I n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FRC6_SORC5 Length = 864 Score = 48.9 bits (116), Expect = 9e-05, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASR 170 L+ L+ A +K EV+LAT+P EGEA A +I+E ++ +R Sbjct: 64 LEELKS--AAKKADEVLLATDPDREGEAIAFHISEEIKNPKLKVAR 107 >UniRef50_A3DN56 Reverse gyrase n=2 Tax=Archaea RepID=A3DN56_STAMF Length = 1220 Score = 48.9 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 44/161 (27%), Gaps = 58/161 (36%) Query: 45 QALTRAMSEIGHCADCRT-FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSG 103 ++ + I C C FT + C C + ++ Sbjct: 697 NRISPVYTSIKRCRVCGYQFTYGDRCPRCGSTSFTDS----------------------- 733 Query: 104 RYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQ 163 Y V+ R ++ EV +AT+P +EGE A + Sbjct: 734 -YEVVN-------------------VLRKLAQEADEVYIATDPDIEGEKIAYDVYLTIKG 773 Query: 164 YDVEASRIAHGVPVGGELEMVDGTTLS---HSLAGRHKIRF 201 + RI TL+ ++L + I Sbjct: 774 FVDRVWRIELH-----------EITLNEFLNALENKRNINL 803 >UniRef50_Q08SU2 Recombination protein RecR (Fragment) n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08SU2_STIAU Length = 39 Score = 48.5 bits (115), Expect = 1e-04, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 19/29 (65%) Query: 4 SPLLTQLMEALRCLPGVGPKSAQRMAFTL 32 L +L+ L LPG+G K+AQR+AF + Sbjct: 3 PDPLNRLVAQLAKLPGIGEKTAQRLAFHI 31 >UniRef50_D0LR99 DNA topoisomerase n=169 Tax=cellular organisms RepID=D0LR99_HALO1 Length = 894 Score = 48.5 bits (115), Expect = 1e-04, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 25/119 (21%) Query: 75 PRRQENGQ----ICVVESPADIYAIEQTGQFSG-RYFVLM--GHLS--PLDGIG------ 119 R + + + VVESPA I G++ G Y V GH+ P + IG Sbjct: 127 KSRSKATKQGKALVVVESPAKARTI---GKYLGPDYTVKASVGHIKDLPKNKIGVDVDQA 183 Query: 120 --PDDIGLDRLEQ-----RLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRI 171 P+ + + ++ R A E++ EV LA +P EGEA A +IAE + RI Sbjct: 184 FEPEYVVISDKKKVISEIRKAAERVEEVYLAPDPDREGEAIAWHIAEEIKPINDNIKRI 242 >UniRef50_Q3A7H8 DNA topoisomerase n=13 Tax=Bacteria RepID=Q3A7H8_PELCD Length = 841 Score = 47.3 bits (112), Expect = 3e-04, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 23/98 (23%) Query: 83 ICVVESPADIYAIEQTGQFSGR-YFVL------------------MGHLSPLDGIGPDDI 123 + +VESPA IE+ F G Y VL + SPL + P+ Sbjct: 5 LVIVESPAKAKTIEK---FLGPGYKVLASYGHVRALPSKQGSVDVEHNFSPLYHVLPESQ 61 Query: 124 GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELC 161 L ++ +K E+ILAT+P EGEA A ++ E Sbjct: 62 KHIELLKK-EAKKSRELILATDPDREGEAIAWHLLEAL 98 >UniRef50_B8D628 Reverse gyrase n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D628_DESK1 Length = 1212 Score = 47.3 bits (112), Expect = 3e-04, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 43/155 (27%), Gaps = 58/155 (37%) Query: 50 AMSEIGHCADCRT-FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVL 108 I C C T FT + C C + ++ I + A+ Sbjct: 693 VYEYIKKCRLCGTQFTTGDHCPRCGSRLFSDSRTI--------VAAL------------- 731 Query: 109 MGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEA 168 R ++ EV +AT+P +EGE A + Y+ + Sbjct: 732 ----------------------RKIAGEVDEVYIATDPDIEGEKIAYDVYLAVKYYNEKV 769 Query: 169 SRIAHGVPVGGELEMVDGTTLS---HSLAGRHKIR 200 RI TL ++ + I Sbjct: 770 WRIELH-----------EITLQEFLKAINNKRGIN 793 >UniRef50_B8E2F6 DNA topoisomerase n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E2F6_DICTD Length = 696 Score = 45.8 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 23/112 (20%) Query: 79 ENGQICVVESPADIYAIEQ--TGQFSGRYFVLM--GHLSPL----------DGIGPDDIG 124 +N ++ +VESPA IE+ +F VL GH+ L + P + Sbjct: 2 DNEKLIIVESPAKAKTIEKILGKEFK----VLASYGHIRDLPEKELGVDIENNFKPKYVL 57 Query: 125 LDRLEQRLAE-----EKITEVILATNPTVEGEATANYIAELCAQYDVEASRI 171 L ++ + +K ++ LAT+P EGEA A ++ E + +RI Sbjct: 58 LPSRKKIIDTIKDLSKKAEKLYLATDPDREGEAIAWHLVEELKLPKEKFTRI 109 >UniRef50_Q9JN65 DNA topoisomerase 1 n=2 Tax=Mycoplasma gallisepticum RepID=TOP1_MYCGA Length = 719 Score = 45.4 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASR 170 +D L +K E+ LAT+P EGEA + ++ ++ + V ++ Sbjct: 88 IDELVD--KAKKADEIYLATDPDREGEAISWHVYDVLKEKGVNVNK 131 >UniRef50_A8A9U6 Reverse gyrase n=3 Tax=Archaea RepID=A8A9U6_IGNH4 Length = 1259 Score = 45.4 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 39/125 (31%), Gaps = 45/125 (36%) Query: 48 TRAMSEIGHCADCRTFTEQEV--CNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRY 105 +S I CA C +V C C +P ++ D+ Sbjct: 699 EEVLSSIKRCAVCGHQFSGDVKECPRCGSPFIKD---------AKDVV------------ 737 Query: 106 FVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYD 165 DG L L Q ++ EV++ T+P EGE + L + + Sbjct: 738 ----------DG-------LRELAQ-----EVDEVLIGTDPDTEGEKIGWDLKNLISPFA 775 Query: 166 VEASR 170 + R Sbjct: 776 KKIRR 780 >UniRef50_Q3SMS7 DNA topoisomerase n=8 Tax=Proteobacteria RepID=Q3SMS7_THIDA Length = 857 Score = 45.4 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 24/35 (68%) Query: 133 AEEKITEVILATNPTVEGEATANYIAELCAQYDVE 167 A +K EV+LAT+P EGEA + +I+E+ + V+ Sbjct: 68 AAKKADEVLLATDPDREGEAISWHISEILKEKKVK 102 >UniRef50_Q9X3X7 DNA topoisomerase 1 n=7 Tax=cellular organisms RepID=TOP1_ZYMMO Length = 1217 Score = 45.0 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 21/94 (22%) Query: 82 QICVVESPADIYAIEQTGQFSGR-YFVL------------MGHLSPLDGIGPDDIGLDRL 128 ++ VVESPA IE+ + G Y VL G ++P +G Sbjct: 7 KLVVVESPAKAKTIEK---YLGSGYQVLASYGHIRDLPSKDGSVNPDNGFSMVWQNYPDK 63 Query: 129 EQRLA--EEKITE---VILATNPTVEGEATANYI 157 RL E+ + E +ILAT+P EGEA + +I Sbjct: 64 AHRLKAIEDAVKESDSLILATDPDREGEAISWHI 97 >UniRef50_B7IEV8 Reverse gyrase n=1 Tax=Thermosipho africanus TCF52B RepID=B7IEV8_THEAB Length = 1031 Score = 45.0 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 46/146 (31%), Gaps = 46/146 (31%) Query: 29 AFTLLQRDRSGGMRLAQ-ALTRAMSEIGHCADCRT-FTEQ-EVCNICSNPRRQENGQICV 85 + L+ R+ G+ + + I C DC F + + C C++ + Sbjct: 527 TYDLITREGYHGVEFSNNTFIPIYNTIKKCKDCGYQFVDNYDKCPKCNSKNIDDK----- 581 Query: 86 VESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATN 145 LS L + R ++ E+++A++ Sbjct: 582 --------------------------LSVLKAL------------RELSLEVDEILIASD 603 Query: 146 PTVEGEATANYIAELCAQYDVEASRI 171 P VEGE A I + + RI Sbjct: 604 PDVEGEKIAYDILQYIYPVNSNIKRI 629 >UniRef50_B5YFC7 DNA topoisomerase n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YFC7_DICT6 Length = 694 Score = 45.0 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 23/111 (20%) Query: 80 NGQICVVESPADIYAIEQ--TGQFSGRYFVLM--GHLSPL----------DGIGPDDIGL 125 ++ +VESPA IE+ F VL GH+ L +G P + L Sbjct: 3 KEKLIIVESPAKAKTIEKILGKDFK----VLASYGHIRDLPEKELGVDIENGFKPKYVLL 58 Query: 126 DRLEQRLAE-----EKITEVILATNPTVEGEATANYIAELCAQYDVEASRI 171 ++ + +K+ ++ LAT+P EGEA A ++ E + +RI Sbjct: 59 PSRKKIIDTIKDLSKKVEKLYLATDPDREGEAIAWHLVETLKLPKDKFTRI 109 >UniRef50_Q6F598 Pko r-Gyr intein n=16 Tax=cellular organisms RepID=RGYR_PYRKO Length = 1711 Score = 44.7 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 22/41 (53%) Query: 131 RLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRI 171 R +++ E+++AT+P EGE A I + A Y RI Sbjct: 760 REIAQEVDEILIATDPDTEGEKIAWDIRNVLAPYTPNIKRI 800 >UniRef50_B3PMD8 DNA topoisomerase I n=3 Tax=Mycoplasma RepID=B3PMD8_MYCA5 Length = 620 Score = 44.7 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 25/110 (22%) Query: 81 GQICVVESPADIYAIEQTGQFSGR-Y-------FVLMGHLSPLDGIGPDDIGLDRLE--Q 130 ++ +VESP + I Q+ G Y +L S +DG+G D + + Sbjct: 3 QKVLIVESPNKVKTI---QQYVGSDYNVVSSVGHILKLSTSGVDGLGIDFTNWEPMMIQD 59 Query: 131 RLAEEKIT----------EVILATNPTVEGEATANYIAELCAQYDVEASR 170 R + I EV++AT+P EGEA A + + + R Sbjct: 60 RTKAKVIKALKDATKNAKEVLIATDPDREGEAIAQNLVDTLKLS--KIYR 107 >UniRef50_B1VAJ5 DNA topoisomerase n=6 Tax=Acholeplasmataceae RepID=B1VAJ5_PHYAS Length = 655 Score = 44.3 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 21/101 (20%) Query: 80 NGQICVVESPADIYAIEQTGQFSGRYFVL--MGHLSPLDGIGPDDIGLD----------- 126 ++ +VESPA I + + F + +L GH+ L G D +G+D Sbjct: 2 KKKVIIVESPAKIKTL--SRFFDDKVEILSSKGHIRDLSLSGKDRLGIDIKNGFIPKYEI 59 Query: 127 -----RLEQ-RLAEEKITEVILATNPTVEGEATANYIAELC 161 L + + + K E+ LAT+P EGEA A +++++ Sbjct: 60 IKEKKTLVESLIKKTKNKEIFLATDPDREGEAIAWHLSKVL 100 >UniRef50_A4YIX2 Reverse gyrase n=2 Tax=cellular organisms RepID=A4YIX2_METS5 Length = 1220 Score = 43.5 bits (102), Expect = 0.004, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 35/123 (28%), Gaps = 48/123 (39%) Query: 52 SEIGHCADCRTFTE---QEVCNICSNPR-RQENGQICVVESPADIYAIEQTGQFSGRYFV 107 + + C + FTE C IC + R + I V Sbjct: 686 NTLKRCENGHQFTEYAEGGKCPICMSTNVRDKRSAINV---------------------- 723 Query: 108 LMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVE 167 L RL + EV++ T+P VEGE A + ++ Sbjct: 724 -----------------LRRLV-----LEADEVLIGTDPDVEGEKIAWDLYLNLKPFNSN 761 Query: 168 ASR 170 R Sbjct: 762 IFR 764 >UniRef50_Q87AQ6 DNA topoisomerase 1 n=26 Tax=Gammaproteobacteria RepID=TOP1_XYLFT Length = 815 Score = 43.1 bits (101), Expect = 0.006, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 21/102 (20%) Query: 83 ICVVESPADIYAIEQTGQFSGRYF-VL------------MGHLSPLDGIGPDDIGLDRLE 129 + +VESPA I ++ G+ F VL G + P +G +D+ E Sbjct: 5 LLIVESPAKAKTI---NKYLGKDFTVLASYGHVRDLVPKEGAVDPENGFAMRYDLIDKNE 61 Query: 130 QRLAE-----EKITEVILATNPTVEGEATANYIAELCAQYDV 166 + + + + LAT+P EGEA + +I+E+ + + Sbjct: 62 KHVEAITKAAKTADSIYLATDPDREGEAISWHISEILKERGL 103 >UniRef50_Q74MA4 Reverse gyrase n=1 Tax=Nanoarchaeum equitans RepID=Q74MA4_NANEQ Length = 701 Score = 43.1 bits (101), Expect = 0.006, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 31/118 (26%), Gaps = 44/118 (37%) Query: 54 IGHCADCRT-FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHL 112 I C DC F +++ C C + + Sbjct: 117 IKKCLDCGHQFVDEDKCPRCGSENIDDAS------------------------------- 145 Query: 113 SPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASR 170 + L E I V++ T+P EGE A + + Y+ R Sbjct: 146 ----------DRIKVLRDLAQEADI--VLIGTDPDAEGEKIAYDVYSIIRPYNKNIYR 191 >UniRef50_Q2LT40 DNA topoisomerase n=2 Tax=Bacteria RepID=Q2LT40_SYNAS Length = 769 Score = 43.1 bits (101), Expect = 0.006, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 25/108 (23%) Query: 83 ICVVESPADIYAIEQTGQFSGR-YFVL--MGHLSPLD----GIGPDDI------------ 123 + +VESP + + ++ G Y VL GH+ L GI P + Sbjct: 5 LIIVESPTKVKTL---KKYLGADYEVLASKGHIKDLPKKTLGIDPQNEFQPTYSVIDDKK 61 Query: 124 -GLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASR 170 + L++ A + ++ + LA +P EGEA A +IAE + E R Sbjct: 62 KVIADLKK--AAKNVSRIFLAPDPDREGEAIAWHIAEEIKAKNKEIYR 107 >UniRef50_Q9YC75 Topoisomerase n=4 Tax=Archaea RepID=RGYR2_AERPE Length = 1215 Score = 42.7 bits (100), Expect = 0.007, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 36/121 (29%), Gaps = 45/121 (37%) Query: 52 SEIGHCADCRT--FTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLM 109 S I C DC + C C +PR+ ++ VVE Sbjct: 700 STIKRCLDCGAQHTSSSPFCPRCGSPRQVDSKS--VVE---------------------- 735 Query: 110 GHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEAS 169 R ++ E+++AT+P EGE A + Y+ Sbjct: 736 -------------------ILRKLASEVDEIVIATDPDREGEKIAWDVFLAVRPYNPNVR 776 Query: 170 R 170 R Sbjct: 777 R 777 >UniRef50_B9L0B0 DNA topoisomerase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0B0_THERP Length = 744 Score = 42.7 bits (100), Expect = 0.007, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRI 171 + L++ + E+ILAT+P EGEA A ++ E +D RI Sbjct: 96 VKELQESVQR--ARELILATDPDREGEAIAWHLIEATRAHDKPVRRI 140 >UniRef50_Q67PC7 DNA topoisomerase n=3 Tax=Bacteria RepID=Q67PC7_SYMTH Length = 735 Score = 42.3 bits (99), Expect = 0.010, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 25/100 (25%) Query: 83 ICVVESPADIYAIEQTGQFSGR-Y-------FV-------LMGHLSPLDGIGPDDIGL-- 125 + +VESPA IE+ F GR Y V L +S + P I + Sbjct: 5 LIIVESPAKAKTIEK---FLGRKYAVKASMGHVRDLPKSQLG--VSVENDFEPKYITIRG 59 Query: 126 --DRLEQ-RLAEEKITEVILATNPTVEGEATANYIAELCA 162 D L++ R + K V LAT+P EGEA + ++A++ Sbjct: 60 KGDILKELRESARKADRVYLATDPDREGEAISWHLAQVLK 99 >UniRef50_D1C7I9 DNA topoisomerase n=8 Tax=Bacteria RepID=D1C7I9_SPHTD Length = 769 Score = 42.0 bits (98), Expect = 0.012, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 22/41 (53%) Query: 131 RLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRI 171 R ++ E++LAT+P EGEA A ++ E D RI Sbjct: 125 RADVKEAREILLATDPDREGEAIAWHLVEATDPGDKPVRRI 165 >UniRef50_A6Q5V5 Reverse gyrase n=30 Tax=cellular organisms RepID=A6Q5V5_NITSB Length = 1118 Score = 42.0 bits (98), Expect = 0.014, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Query: 103 GRYFVL--MGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAEL 160 G Y VL + + I + + +R+ E + +V +AT+P VEGE + + L Sbjct: 635 GVYGVLRQEHFIPLFEPIDENKRRIIEALRRIGVE-VQDVYIATDPDVEGEKISYDLQLL 693 Query: 161 CAQYDVEASR 170 Y+ R Sbjct: 694 TKPYNHTVQR 703 >UniRef50_B1GYR4 DNA topoisomerase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYR4_UNCTG Length = 740 Score = 41.6 bits (97), Expect = 0.014, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 116 DGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRI 171 I + L+++ ++ LAT+ EGEA A ++ E + + SRI Sbjct: 55 KNISKSKKLISDLKKKAENS--DKIYLATDFDREGEAIAWHLKEALKLPESKISRI 108 >UniRef50_Q3M6J7 DNA topoisomerase n=12 Tax=Cyanobacteria RepID=Q3M6J7_ANAVT Length = 728 Score = 41.6 bits (97), Expect = 0.015, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 2/40 (5%) Query: 122 DIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELC 161 + +L+ A ++++EV+LAT+P EGE A ++ E+ Sbjct: 66 KETIQQLKS--AAKQVSEVVLATDPDREGETIAWHLKEVL 103 >UniRef50_Q4QCK3 DNA topoisomerase 1A n=6 Tax=Trypanosomatidae RepID=Q4QCK3_LEIMA Length = 812 Score = 41.6 bits (97), Expect = 0.015, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 18/73 (24%) Query: 133 AEEKITEVILATNPTVEGEATANY----IAELCAQYDVEASRIAHGVPVGGELEMVDGTT 188 + +TE+I+AT+P EGE A + I + Q + +R + T Sbjct: 119 KADNLTEIIVATDPDREGELIAVHAQNLIRRMFPQLNAPFTRA-----------YMHSIT 167 Query: 189 ---LSHSLAGRHK 198 + ++ RH+ Sbjct: 168 ADGIRRAMEERHE 180 >UniRef50_B5YKX8 DNA topoisomerase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKX8_THEYD Length = 777 Score = 41.6 bits (97), Expect = 0.016, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Query: 116 DGIGPDDIGLDRLEQRLAE-----EKITEVILATNPTVEGEATANYIAELCAQYDVEASR 170 G PD I + E+ + E + ++ +AT+P EGEA A +IAE + + R Sbjct: 51 KGFQPDYIIIPGKEKIVKELKDSAKNAQKIFIATDPDREGEAIAYHIAEEIKVPENKVYR 110 >UniRef50_C1E9E3 DNA topoisomerase n=1 Tax=Micromonas sp. RCC299 RepID=C1E9E3_9CHLO Length = 1227 Score = 41.6 bits (97), Expect = 0.016, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 20/103 (19%) Query: 81 GQICVVESPADIYAIEQTGQFSGR-YFVLM--GHLSPL----DGIGPDDIGLDRLEQRLA 133 G++ VVESPA ++++ + G Y VL GH+ L G+ P+D ++ Sbjct: 134 GKLVVVESPAKATSVQK---YLGDGYTVLASYGHVRDLVQKNGGVKPEDDFAMLWAEKAR 190 Query: 134 EEKIT----------EVILATNPTVEGEATANYIAELCAQYDV 166 + + E++LAT+P EGEA + +I EL + V Sbjct: 191 DGVVRDIVKNAKGAAELLLATDPDREGEAISWHIVELLREKGV 233 >UniRef50_A2BLB8 Reverse gyrase n=2 Tax=Hyperthermus butylicus RepID=A2BLB8_HYPBU Length = 1183 Score = 41.2 bits (96), Expect = 0.023, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 47/148 (31%), Gaps = 53/148 (35%) Query: 54 IGHCADCR--TFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGH 111 I C C + +VC C + +V D+ Sbjct: 666 IKRCLSCGHQFSSSSQVCPRCGSSN--------IVSK-EDV------------------- 697 Query: 112 LSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRI 171 + L Q E ++ V +AT+P VEGE A I L Y + RI Sbjct: 698 -------------IGALRQLAIENEV--VYIATDPDVEGEKIAYDIYLLLRPYARKIMRI 742 Query: 172 AHGVPVGGELEMVDGTTLSHSLAGRHKI 199 EL + + L+ +LA ++ Sbjct: 743 --------ELHEITRSELNRALANPREV 762 >UniRef50_Q1UZD4 DNA topoisomerase n=4 Tax=Bacteria RepID=Q1UZD4_PELUB Length = 863 Score = 41.2 bits (96), Expect = 0.024, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 21/102 (20%) Query: 83 ICVVESPADIYAIEQTGQFSGR-YFVL------------MGHLSPLDGI----GPDDIGL 125 + VVESPA I ++ G Y VL G + P + D Sbjct: 3 LVVVESPAKAKTI---NKYLGDDYIVLASYGHIRDLPSKNGSVDPENNFKMEWEVDSFSK 59 Query: 126 DRLEQRLAEEKIT-EVILATNPTVEGEATANYIAELCAQYDV 166 L++ KI+ ++ILAT+P EGEA A ++ E + + Sbjct: 60 KYLKEITDAAKISSKIILATDPDREGEAIAWHVKEYLNEKKL 101 >UniRef50_C1MSJ2 DNA topoisomerase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MSJ2_9CHLO Length = 1243 Score = 40.8 bits (95), Expect = 0.029, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 18/26 (69%) Query: 140 VILATNPTVEGEATANYIAELCAQYD 165 V+LAT+P EGEA A +I+EL + Sbjct: 172 VVLATDPDREGEAIAWHISELLKERG 197 >UniRef50_C1D174 DNA topoisomerase n=34 Tax=cellular organisms RepID=C1D174_DEIDV Length = 966 Score = 40.8 bits (95), Expect = 0.031, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Query: 114 PLDGIGPDD-IGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQY 164 PL + PD + +L + A+ E+ILAT+ EGE+ A ++ + Sbjct: 66 PLYVVAPDKRQHVAKLRKLAAD--ADEIILATDDDREGESIAWHLFQELKPK 115 >UniRef50_C5CFS3 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=RUVA_KOSOT Length = 195 Score = 40.4 bits (94), Expect = 0.033, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 5/55 (9%) Query: 4 SPLLTQLMEA-----LRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSE 53 +L +++ + L LPG+G K+A+R+ L + + + L+ + Sbjct: 95 PEMLQKMIASKDISGLSRLPGLGKKTAERLVSELYDLVKDYAVEFPKELSDVSED 149 >UniRef50_O58530 Pho r-Gyr intein n=3 Tax=Pyrococcus RepID=RGYR_PYRHO Length = 1624 Score = 40.4 bits (94), Expect = 0.037, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 20/41 (48%) Query: 131 RLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRI 171 R ++ E+++ T+P EGE A I + A Y RI Sbjct: 758 RELALEVDEILIGTDPDTEGEKIAWDIRNVLAPYAPNIKRI 798 >UniRef50_A8ZW15 DNA topoisomerase n=3 Tax=Desulfobacteraceae RepID=A8ZW15_DESOH Length = 758 Score = 40.4 bits (94), Expect = 0.039, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 25/111 (22%) Query: 80 NGQICVVESPADIYAIEQTGQFSGR-Y--------------FVLMGHLSPLDGIGPDDIG 124 N + +VESP + I + ++G Y L + +G PD + Sbjct: 2 NKPVIIVESPTKVKTITK---YTGNAYSVTATSGHLRDLPPHELG--IDIDNGFAPDYVN 56 Query: 125 LDRLEQRLAE-----EKITEVILATNPTVEGEATANYIAELCAQYDVEASR 170 + ++ + ++ LA +P EGEA A ++A+L + R Sbjct: 57 IKGKQKVIKALKSAVGDADDIYLAPDPDREGEAIAFHVADLLKKKGRRFHR 107 >UniRef50_B3EPW7 DNA topoisomerase n=12 Tax=Chlorobiaceae RepID=B3EPW7_CHLPB Length = 804 Score = 40.4 bits (94), Expect = 0.040, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 25/112 (22%) Query: 79 ENGQICVVESPADIYAIEQTGQFSGR-YFVLM--GHLS--PLDGIGPDDIG--------- 124 + + VVESP+ I ++ G Y V GH+ P IG D Sbjct: 11 KGKTLIVVESPSKAKTI---NKYLGSDYLVFASVGHIKDLPKKEIGLDFDNNYEPRYEVI 67 Query: 125 ------LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASR 170 + +L++ + ++++AT+P EGEA A +IA R Sbjct: 68 SGKEKVVRQLKKL--AGQANDILIATDPDREGEAIAWHIANEVDAAQKPVHR 117 >UniRef50_B1M0P4 DNA topoisomerase n=14 Tax=Alphaproteobacteria RepID=B1M0P4_METRJ Length = 894 Score = 40.4 bits (94), Expect = 0.040, Method: Composition-based stats. Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 30/116 (25%) Query: 82 QICVVESPADIYAIEQTGQFSGR-YFVLM--GHLS---PLDG-IGPDDIG--LDRLEQRL 132 ++ VVESPA I ++ GR Y V+ GH+ P DG + P+ + L R Sbjct: 2 KVVVVESPAKAKTI---NKYLGRDYEVIASFGHIRDLPPKDGSVDPEQDFRMVWELADR- 57 Query: 133 AEEKITEV----------ILATNPTVEGEATANYIAELC-AQYDVEASRIAHGVPV 177 +++E+ ILAT+P EGEA + ++ E A+ ++ G+PV Sbjct: 58 GASRVSEIAKAVKGADKLILATDPDREGEAISWHVLEALTARKALK------GIPV 107 >UniRef50_Q4DQ13 DNA topoisomerase IA, putative n=3 Tax=Trypanosoma cruzi RepID=Q4DQ13_TRYCR Length = 830 Score = 40.0 bits (93), Expect = 0.051, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 20/80 (25%) Query: 126 DRLEQRLAEE--KITEVILATNPTVEGEATANY----IAELCAQYDVEASRIAHGVPVGG 179 + LE+ + E+ +TE+ILAT+P EGE A + I L + V SR Sbjct: 112 ETLERYIQEKLNNVTEIILATDPDREGELIAVHALQTIKRLYPKLKVPYSRA-------- 163 Query: 180 ELEMVDGTT---LSHSLAGR 196 + T + ++ R Sbjct: 164 ---YMHSITEDGIRKAMRER 180 >UniRef50_A1U7T2 DNA topoisomerase I n=2 Tax=Marinobacter RepID=A1U7T2_MARAV Length = 729 Score = 40.0 bits (93), Expect = 0.051, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 7/42 (16%) Query: 138 TEVILATNPTVEGEATANYIAELCA-QYDVE------ASRIA 172 EVILAT+P EGEA A ++ DV+ +R A Sbjct: 74 DEVILATDPDREGEAIAWHLKVALRLPDDVKRVSYQEITRDA 115 >UniRef50_C9LM02 DNA topoisomerase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LM02_9FIRM Length = 799 Score = 40.0 bits (93), Expect = 0.051, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 19/112 (16%) Query: 79 ENGQICVVESPADIYAIEQTGQFSGRYFVL--MGHLSPL----------DGIGPDDIGLD 126 + + +VESPA IE+ Y VL MGHL L + P+ + Sbjct: 30 KGKHLIIVESPAKAKTIERILGSD--YKVLASMGHLRDLPQRTLGVDVANDFKPEYVSSA 87 Query: 127 RLEQRLAE-----EKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAH 173 + K +++LAT+P EGEA + ++++L +RIA Sbjct: 88 ERADVIENLQKEANKSKDILLATDPDREGEAISWHLSKLLDVDPRSNARIAF 139 >UniRef50_D0KVS8 DNA topoisomerase n=6 Tax=Gammaproteobacteria RepID=D0KVS8_HALNC Length = 834 Score = 39.6 bits (92), Expect = 0.054, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 25/114 (21%) Query: 80 NGQICVVESPADIYAIEQTGQFSGR-YFVLMGH-----LSPLDG--------------IG 119 + + +VESPA I ++ G Y VL + L P DG I Sbjct: 2 SQTLVIVESPAKAKTI---KKYLGPGYEVLASYGHVRDLIPKDGAVDTAHDFAMNYTLID 58 Query: 120 PDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAH 173 + +D +++ L I ++LAT+P EGEA + ++ EL A+ + ++ A Sbjct: 59 KNVRHVDAIKKALKSSDI--LLLATDPDREGEAISWHLRELLAEAGLLKNKTAQ 110 >UniRef50_B7I2H2 DNA topoisomerase n=4 Tax=Proteobacteria RepID=B7I2H2_ACIB5 Length = 672 Score = 39.6 bits (92), Expect = 0.066, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 22/100 (22%) Query: 81 GQICVVESPADIYAIEQT--GQFS-----GRYFVLMGHLSPLD-GIGPDDIGL------- 125 + +VESP + I + G V L P + GI P D Sbjct: 2 TTLVIVESPGKVKKISALLGAGYKVVASVG--HVRD--LPPKELGIEPPDFRPHYQPTER 57 Query: 126 -DRLEQRLAEE--KITEVILATNPTVEGEATANYIAELCA 162 + RL ++ ++LAT+P EGEA A ++A+ Sbjct: 58 GRDVLARLKKDVAAADRILLATDPDREGEAIAWHLADALK 97 >UniRef50_P73810 DNA topoisomerase 1 n=13 Tax=cellular organisms RepID=TOP1_SYNY3 Length = 898 Score = 39.3 bits (91), Expect = 0.070, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 15/75 (20%) Query: 135 EKITEVILATNPTVEGEATANYIAELCAQY-DVE------ASRIAHGVPVGGELEM---V 184 + EVILAT+ EGE+ + ++ +L ++ ++ A + LE + Sbjct: 85 KNADEVILATDEDREGESISWHLLQLLQPKVPIKRMVFHEITQEA----IRSALENCRDI 140 Query: 185 DGTTLSHSLAGRHKI 199 D L H+ R + Sbjct: 141 DEN-LVHAQETRRIL 154 >UniRef50_UPI00016C444E DNA topoisomerase I n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C444E Length = 985 Score = 39.3 bits (91), Expect = 0.074, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 4/84 (4%) Query: 90 ADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEE--KITEVILATNPT 147 DI I+ + RY V G S +G + + E + +V LA++P Sbjct: 92 EDIAGIDIANGWKLRYTVDDG--SKSEGGRKRFRTAKEILGEIGREASRANKVYLASDPD 149 Query: 148 VEGEATANYIAELCAQYDVEASRI 171 EGE+ A +IA+ D RI Sbjct: 150 REGESIAWHIADELKLPDATTYRI 173 >UniRef50_Q8CS09 DNA topoisomerase n=2 Tax=Staphylococcaceae RepID=Q8CS09_STAES Length = 718 Score = 39.3 bits (91), Expect = 0.074, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Query: 125 LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCA-QYDVEASRI 171 + L + L + +E+I+AT+P EGEA A Y+ +++ R+ Sbjct: 94 IKELCENLNSD--SEIIIATDPDREGEAIARYVLNKIPCTKNLKLKRL 139 >UniRef50_D1BMP2 DNA topoisomerase n=6 Tax=Firmicutes RepID=D1BMP2_VEIPT Length = 791 Score = 39.3 bits (91), Expect = 0.075, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 25/113 (22%) Query: 79 ENGQICVVESPADIYAIEQTGQFSGRYFVL---MGHLSPLD----GIGPDDI---GLDRL 128 + + +VESPA IE+ F G +V+ MGHL L GI + L Sbjct: 71 DGKVLVIVESPAKSKTIEK---FLGPNYVVKASMGHLRDLPKSQIGIDIEHDFTPRYSNL 127 Query: 129 EQRLAEEKITE----------VILATNPTVEGEATANYIAELCAQYDVEASRI 171 R ++ I E V+LAT+P EGEA + ++A + RI Sbjct: 128 VTR--KKVIDELVSYADESSAVLLATDPDREGEAISWHLAYILNVDPTSTCRI 178 >UniRef50_C5NYW8 DNA topoisomerase n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYW8_9BACL Length = 702 Score = 39.3 bits (91), Expect = 0.075, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 132 LAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRI 171 L + + EVI+AT+ EGE A YI + + R+ Sbjct: 90 LNRKDVNEVIIATDAGREGELVARYIIDKAK-CNKNVKRL 128 >UniRef50_D1U7W1 DNA topoisomerase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U7W1_9DELT Length = 821 Score = 39.3 bits (91), Expect = 0.077, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 35/139 (25%) Query: 83 ICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKI----T 138 + +VESPA + I + F G+ +++ + + + D+G+D +I Sbjct: 5 LIIVESPAKVKTISK---FLGKDYMVDASVGHVRDLPTRDLGVDEENGFTPRYEIIQGKE 61 Query: 139 EVI--------------LATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMV 184 EV+ LA +P EGEA A ++AEL + RI Sbjct: 62 EVVKRLKAAAKKAGTVYLAPDPDREGEAIAWHVAELLRPVNSNIRRIQF----------- 110 Query: 185 DGTT---LSHSLAGRHKIR 200 + T + +L + Sbjct: 111 NEITARAVKEALENAQDLN 129 >UniRef50_B0MRI8 DNA topoisomerase n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRI8_9FIRM Length = 713 Score = 39.3 bits (91), Expect = 0.077, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 28/110 (25%) Query: 83 ICVVESPADIYAIEQTGQFSGR-YFVLM--GHLSPL----------DGIGPDDIG----- 124 + +VESPA IE+ + G+ Y V+ GH+ L + P Sbjct: 18 LVIVESPAKAKTIEK---YLGKDYSVVASVGHIRDLPKSKLGVDVDNNFEPKYENKKDKA 74 Query: 125 --LDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCA---QYDVEAS 169 + L++ I V LAT+P EGEA + ++A + V + Sbjct: 75 ALIKELKKDAKASDI--VYLATDPDREGEAISWHLAHVLGISPDAPVRVT 122 >UniRef50_Q04TE1 DNA topoisomerase n=4 Tax=Leptospira RepID=Q04TE1_LEPBJ Length = 613 Score = 39.3 bits (91), Expect = 0.087, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 24/110 (21%) Query: 81 GQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKI--- 137 + +VESP+ I G + G+ F ++ L + + +GLD L+ R E + Sbjct: 2 SSLIIVESPSKAKTI---GGYLGKEFRILATLGHVADLPKTTLGLD-LKNRFEPEYVVLP 57 Query: 138 ------TEVI----------LATNPTVEGEATANYIAELCAQYDVEASRI 171 +E+I LAT+P EGE + YI + + RI Sbjct: 58 GKKKILSEIIKAAKESQRIFLATDPDREGEFISAYIRDRLKKKS-NVFRI 106 >UniRef50_C9LSJ2 DNA topoisomerase n=3 Tax=Veillonellaceae RepID=C9LSJ2_9FIRM Length = 836 Score = 39.3 bits (91), Expect = 0.087, Method: Composition-based stats. Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 21/99 (21%) Query: 81 GQICVVESPADIYAIEQTGQFSGR-YFVL--MGHLSPL----------DGIGPDDIGLD- 126 + VVESPA IE+ + G+ Y V MGHL L + P I + Sbjct: 116 QTLVVVESPAKAKTIEK---YLGKKYMVRASMGHLRDLPKSQFGIDVENDFAPKYINIRG 172 Query: 127 --RLEQRLAE--EKITEVILATNPTVEGEATANYIAELC 161 L + L + + +V LA++P EGEA A ++A + Sbjct: 173 KGDLIKALKKDAKHAAKVYLASDPDREGEAIAWHLAHIL 211 >UniRef50_C9R890 Reverse gyrase n=1 Tax=Ammonifex degensii KC4 RepID=C9R890_AMMDK Length = 1143 Score = 38.9 bits (90), Expect = 0.093, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 18/36 (50%) Query: 136 KITEVILATNPTVEGEATANYIAELCAQYDVEASRI 171 ++ EV +A++P EGE A + ++ R+ Sbjct: 695 EVDEVYIASDPDAEGEKIAYDLYLSLRPFNPHIYRL 730 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.177 0.590 Lambda K H 0.267 0.0542 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,784,543,482 Number of Sequences: 3077464 Number of extensions: 100641898 Number of successful extensions: 246592 Number of sequences better than 1.0e-01: 195 Number of HSP's better than 0.1 without gapping: 395 Number of HSP's successfully gapped in prelim test: 67 Number of HSP's that attempted gapping in prelim test: 245502 Number of HSP's gapped (non-prelim): 510 length of query: 201 length of database: 1,040,396,356 effective HSP length: 122 effective length of query: 79 effective length of database: 664,945,748 effective search space: 52530714092 effective search space used: 52530714092 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 91 (39.3 bits)