08/01/2012 03:00:29 : INFO  : Run start: Sun Jan  8 03:00:28 GMT 2012
08/01/2012 03:00:37 : INFO  : Initialised job
08/01/2012 03:00:39 : INFO  : Renaming log file 'phyre2_20120108_030027.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/c7fa664ad6996e65/phyre_20120108_030027.log'
08/01/2012 03:00:41 : INFO  : Initialised job:
Sequence
>batch____
MQDLISQVEDLAGIEIDHTTSMVMIFGIIFLTAVVVHIILHWVVLRTFEKRAIASSRLWL
QIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTCAQLWIMMYALLSVFSLLD
VILNLAQKFPAASQLPLKGIFQGIKLIGAILVGILMISLLIGQSPAILISGLGAMAAVLM
LVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGAVIDIGLTTVKVRNWDNTITTIP
TWSLVSDSFKNWSGMSASGGRRIKRSISIDVTSIRFLDEDEMQRLNKAHLLKPYLTSRHQ
EINEWNRQQGSTESVLNLRRMTNIGTFRAYLNEYLRNHPRIRKDMTLMVRQLAPGDNGLP
LEIYAFTNTVVWLEYESIQADIFDHIFAIVEEFGLRLHQSPTGNDIRSLAGAFKQ

08/01/2012 03:00:43 : INFO  : Checked sequence
08/01/2012 03:00:47 : INFO  : Finding homologues with PSI-BLAST
08/01/2012 03:00:48 : INFO  : PSI-BLAST 3 iterations
08/01/2012 03:02:57 : INFO  : PSI-BLAST 5 iterations
08/01/2012 03:05:43 : INFO  : Finished PSI-BLAST
08/01/2012 03:05:46 : INFO  : Running Buildali to generate a3m file
08/01/2012 03:16:02 : INFO  : Converting to HMM
08/01/2012 03:16:07 : INFO  : Calibrating HMM
08/01/2012 03:16:25 : INFO  : Searching HMM database
08/01/2012 03:24:44 : INFO  : Finished buildali
08/01/2012 03:24:46 : INFO  : Predicting secondary structure
08/01/2012 03:24:59 : INFO  : Predicted secondary structure (PSI-Pred)
08/01/2012 03:25:01 : INFO  : Predicting Disordered regions
08/01/2012 03:25:08 : INFO  : Predicted Disorder (Disopred)
08/01/2012 03:25:10 : INFO  : Running memsat_svm check
08/01/2012 03:28:12 : INFO  : Running memsat_svm full
08/01/2012 03:33:41 : INFO  : Predicted Transmembrane (memsat_svm) ID 'c7fa664ad6996e65'
08/01/2012 03:33:43 : INFO  : Initialising fold library search
08/01/2012 03:33:47 : INFO  : Initialised search input
08/01/2012 03:33:50 : INFO  : Building Ensemble models
08/01/2012 03:33:54 : INFO  : Building hh.c2vv5D_.model.1.pdb
08/01/2012 03:34:14 : INFO  : Building c2vv5D_.1.pdb
08/01/2012 03:34:33 : INFO  : Building d2vv5a1.2.pdb
08/01/2012 03:34:50 : INFO  : Building d2vv5a2.3.pdb
08/01/2012 03:35:08 : INFO  : Building d2vv5a3.4.pdb
08/01/2012 03:35:25 : INFO  : Building d1nz9a_.5.pdb
08/01/2012 03:35:44 : INFO  : Building d1nppa2.6.pdb
08/01/2012 03:36:01 : INFO  : Building d2hqha1.7.pdb
08/01/2012 03:36:17 : INFO  : Building c2kvqG_.8.pdb
08/01/2012 03:36:33 : INFO  : Building c2jvvA_.9.pdb
08/01/2012 03:36:50 : INFO  : Building c2e6zA_.10.pdb
08/01/2012 03:37:07 : INFO  : Building c2zkrt_.11.pdb
08/01/2012 03:37:25 : INFO  : Building c2l82A_.12.pdb
08/01/2012 03:37:42 : INFO  : Building d1t9ha1.13.pdb
08/01/2012 03:37:58 : INFO  : Building c3p8bB_.14.pdb
08/01/2012 03:38:17 : INFO  : Building d1u0la1.15.pdb
08/01/2012 03:38:33 : INFO  : Building c2rcnA_.16.pdb
08/01/2012 03:38:51 : INFO  : Building d2gvha1.17.pdb
08/01/2012 03:39:07 : INFO  : Building c2gvhC_.18.pdb
08/01/2012 03:39:25 : INFO  : Building d2eyqa1.19.pdb
08/01/2012 03:39:43 : INFO  : Building c2yv5A_.20.pdb
08/01/2012 03:40:21 : INFO  : Finished HH model building
08/01/2012 03:40:23 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
08/01/2012 03:42:00 : INFO  : html domain output complete ID 'c7fa664ad6996e65'
08/01/2012 03:58:21 : INFO  : Run end  : Sun Jan  8 03:58:19 GMT 2012
