Phyre 2 alignment of P0AAT4 with c1u0lB_

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Job Description | P0AAT4
Confidence | 36.96% | Date | Thu Jan 5 11:13:46 GMT 2012
Rank | 35 | Aligned Residues | 37
% Identity | 22% | Template | c1u0lB_
PDB info | PDB header:hydrolase | Chain: B: PDB Molecule:probable gtpase engc; | PDBTitle: crystal structure of yjeq from thermotoga maritima
Resolution | 2.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 204 | . | . | . | . | . | 210 | . |  | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 |  |  |  |  |  | . | . | . | . | . | . | . | . | . | 240
Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | G | D | W | L | E | M | P | . | K | Y | G | A | D | G | A | V | I | D | I | G | L | T | T | V | K | V | R | . | . | . | . | . | N | W | D | N | T | I | T | T | I | P
Query Conservation |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | G | D | R | V | E | Y | T | P | D | E | T | G | S | G | V | I | E | N | V | L | H | R | K | N | L | L | T | K | P | H | V | A | N | V | D | Q | V | I | L | V | V | T
Template Known Secondary structure |  | T | T |  |  |  |  |  |  |  |  | S | T | T | S | B |  |  |  |  |  |  |  |  | S |  |  |  | T | T | T | T |  |  | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 345 | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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