Phyre 2 alignment of P0AAT4 with d2btva_

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Job Description | P0AAT4
Confidence | 17.18% | Date | Thu Jan 5 11:13:46 GMT 2012
Rank | 68 | Aligned Residues | 35
% Identity | 26% | Template | d2btva_
SCOP info | Reovirus inner layer core protein p3 | Reovirus inner layer core protein p3 | Orbivirus core
Resolution | 3.50

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 192 | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | G | I | Q | L | S | A | N | D | M | L | K | L | G | D | W | L | E | M | P | K | Y | G | A | D | G | A | V | I | D | I | G | L | T | T | V | K | V | R | N | W | D | N | T | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | Q | F | R | A | A | L | R | R | I | M | D | D | D | D | W | V | R | F | . | . | G | G | V | . | . | . | . | . | . | . | . | L | R | T | V | R | V | K | F | F | D | A | R | P
Template Known Secondary structure |  | T |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  | . | . |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | S | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 756 | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . |  |  | . | . | . |  |  |  |  |  |  |  |  | . | . | 780 | . | . | . | . | . | . | . | . | . | 790

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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