35 c3csgA_ Probab=100.00  E-value=1.6e-33  Score=199.50  Aligned_columns=271  Identities=16%

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCCCCC
Q ss_conf             89997776678134579999999987488799997189799999999602799830885067303689997898576782
Q batch____        22 LTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGV  101 (327)
Q Consensus        22 ltv~~~~s~~~~~~~~~~l~~~Fe~~~gi~V~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~~~~g~l~~~~~  101 (327)
                      |+||+.++  .....+++++++|||+|||+|+++..++   +.+++.....++..++++..+...+..+++.|++.++++
T Consensus         2 l~vW~~~~--~~~~~~~e~~~~Fek~tGIkV~~~~~~d---~~~kl~~~~asG~~PDI~~~~~~~~~~~~~~G~L~~L~~   76 (458)
T c3csgA_           2 LVIWINGD--KGYNGLAEVGKKFEKDTGIKVTVEHPDK---LEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITP   76 (458)
T ss_dssp             EEEECCTT--SCHHHHHHHHHHHHHHHCCCEEEECCTT---HHHHHHHHHTTTCSCSEEEEEHHHHHHHHHTTCBCCCCC
T ss_pred             EEEEEECC--CHHHHHHHHHHHHHHCCCCEEEEEECCC---HHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCCEECCCC
T ss_conf             89997085--3578999999987203796899986210---799999998389997199987212788997898213781


Q ss_pred             --------HHHHCCCCCCCCCCEEEEEEEEEEEEEEECHHCCCCCCCCHHH----HHHHHCCCEEECCCCCCHHHHHHHH
Q ss_conf             --------0331143322575517788750299999710114478980464----0276629500017774236899998
Q batch____       102 --------AADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKEL----VESDQNWRVIYQDPRTSTPGLGLLL  169 (327)
Q Consensus       102 --------~~~~~~~~~~~~~~y~iP~~~~~~~l~yn~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  169 (327)
                              ..........+|+.|++|+..++.+++||||+|+++|.+|+++    ..-...+...+..+.........+.
T Consensus        77 ~~~~~d~~~~~~~~~~~~dGk~YgiP~~~~~~~l~YNkdlf~e~P~Twdel~~~a~klk~~g~~~~~~~~~~~~~~~~~~  156 (458)
T c3csgA_          77 DKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLI  156 (458)
T ss_dssp             CHHHHTTBCHHHHHTTEETTEECSEEEEEECCEEEEETTTCSSCCSBGGGHHHHHHHHHTTTCEEECCCTTCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHEEECCEEEEEECCCCEEEEEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHH
T ss_conf             04356530256563077889799975277147999806661212368889999999988579830673364205799999


Q ss_pred             HHH--------------------CCCCCCHHHHHHHHHHCCCEECCC-HHHHHHHHHCCCCCEEEEECCHHHHHHHHCCC
Q ss_conf             643--------------------037621799999998548757268-48999999879956899727069998740389
Q batch____       170 WMQ--------------------KVYGDDAPQAWQKLAKKTVTVTKG-WSEAYGLFLKGESDLVLSYTTSPAYHILEEKK  228 (327)
Q Consensus       170 ~~~--------------------~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~  228 (327)
                      ...                    .....+..+++.++.+++...... +.+....|.+|+++|.+.+.|..........+
T Consensus       157 ~~~gg~~~~~~~~~~~~~~~~l~sp~~~~al~~~~~l~~~g~~~~~~~~~~~~~~F~~G~~am~~~g~w~~~~~~~~~~~  236 (458)
T c3csgA_         157 AADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVN  236 (458)
T ss_dssp             HHTTCEEEEECSSSEEEEEEESSSHHHHHHHHHHHHHHHTTSSCTTCCHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCC
T ss_pred             HHHCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCC
T ss_conf             98564200126852345663438999999999999999708989888977898998649745998450335567417986


Q ss_pred             CCEEEEECCCC----CEEEEEEEEEECCCCCHHHHHHHHH-HHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHC
Q ss_conf             97899988998----6623468999889999899999999-983989999999850884565765895577502
Q batch____       229 DNYAAANFSEG----HYLQVEVAARTAASKQPELAQKFLQ-FMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLT  297 (327)
Q Consensus       229 ~~~~~~~p~~g----~~~~~~~~~i~~~s~~~~~A~~Fi~-fl~s~e~Q~~~~~~~~~~P~~~~~~~~~~~~~~  297 (327)
                      ..+..++...|    +..++++++|+++|+|+++|++||+ |+.++|.|..+...++..|.+.....+.+...+
T Consensus       237 ~~v~~~P~~~g~~~~~~~g~~~~~I~~~SknkeaA~~Fl~~~~~s~e~~~~~~~~~~~~~~~~~~~~~~~~~~p  310 (458)
T c3csgA_         237 YGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDP  310 (458)
T ss_dssp             EEEECCCEETTEECCCEEEEEEEEEBTTCTTHHHHHHHHHHTTSSHHHHHHHHHHSCCCEESBHHHHHHHTTSH
T ss_pred             CCEEECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCH
T ss_conf             13687135688877416787889982898798999999998839989999997318988742100111443183