BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (175 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P63206 Transcriptional regulator gadE n=61 Tax=Enteroba... 353 1e-96 UniRef50_Q83J60 HTH-type transcriptional regulator dctR n=59 Tax... 68 1e-10 UniRef50_B7LQG5 Putative HTH-type transcriptional regulator dctR... 66 5e-10 UniRef50_Q3JAH3 Two component transcriptional regulator, LuxR fa... 42 0.009 UniRef50_Q15U24 Two component transcriptional regulator, LuxR fa... 41 0.020 UniRef50_A5W547 Transcriptional regulator, LuxR family n=5 Tax=P... 39 0.063 UniRef50_C1F244 Two-component system response regulator n=1 Tax=... 39 0.089 >UniRef50_P63206 Transcriptional regulator gadE n=61 Tax=Enterobacteriaceae RepID=GADE_ECO57 Length = 175 Score = 353 bits (906), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 175/175 (100%), Positives = 175/175 (100%) Query: 1 MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKF 60 MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKF Sbjct: 1 MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKF 60 Query: 61 LEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQ 120 LEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQ Sbjct: 61 LEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQ 120 Query: 121 FKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 FKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF Sbjct: 121 FKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 >UniRef50_Q83J60 HTH-type transcriptional regulator dctR n=59 Tax=Enterobacteriaceae RepID=DCTR_SHIFL Length = 176 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 80/167 (47%) Query: 1 MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKF 60 M ++T+D+ + ++ I + EI + ++ VIIDT N++ + Sbjct: 1 MFLIITRDTMFFTAMKNILSKGNVVHIQNEEEIDVMLHQNAFVIIDTLMNNVFHSNFLTQ 60 Query: 61 LEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQ 120 +E+L +IV +P++I + K P+ FV R +I + + + G + + + S Q Sbjct: 61 IERLKPVHVIVFSPFNIKRCLGKVPVTFVPRTITIIDFVALINGSYCSVPEANVSLSRKQ 120 Query: 121 FKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIV 167 +++ I +I L IS +T K NIM L L+R++++V Sbjct: 121 HQVLSCIANQMTTEDILEKLKISLKTFYCHKHNIMMILNLKRINELV 167 >UniRef50_B7LQG5 Putative HTH-type transcriptional regulator dctR, Probable repressor of dctA dicarboxylate transporter gene n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LQG5_ESCF3 Length = 187 Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 40/175 (22%), Positives = 84/175 (48%) Query: 1 MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKF 60 M ++TKD+ L L + +++ + +I V ++ +IIDT N++ + Sbjct: 12 MFLVITKDTVLFNAITFLLNKSQVVHVQDEDDIDLVLHQHCHIIIDTLMNNVFHSAMAEK 71 Query: 61 LEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQ 120 +++L E++IV +P+ I + P+ FV R S+ + + + P + + S Q Sbjct: 72 IKQLRPEQVIVFSPFIIKRCLGDIPVTFVLRNISLIDFMVLVNRGLCPAPEADIMLSRKQ 131 Query: 121 FKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 +++ I + +I + IS +T K ++M L LRR+++++ SY Sbjct: 132 HQVLSYIAQQMQTEDILQKMQISLKTFYCHKHSVMMILNLRRITELIKYPHVSYL 186 >UniRef50_Q3JAH3 Two component transcriptional regulator, LuxR family n=2 Tax=Nitrosococcus oceani RepID=Q3JAH3_NITOC Length = 201 Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Query: 108 PHKNSQL-CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDI 166 P K +QL + + ++ +L+ + K +I + L IS +T++ + NIM KLK+R ++DI Sbjct: 133 PEKLAQLESLTRRERQVFKLLAQGKMNKHIAAELCISIRTVETHRANIMEKLKVRSLADI 192 Query: 167 VTLGI 171 V L I Sbjct: 193 VRLAI 197 >UniRef50_Q15U24 Two component transcriptional regulator, LuxR family n=4 Tax=Gammaproteobacteria RepID=Q15U24_PSEA6 Length = 212 Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust. Identities = 16/54 (29%), Positives = 36/54 (66%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTL 169 + + ++M ++ + I S LN+SQ+T++I + N+M K+++R ++++VTL Sbjct: 154 LTERETEVMHRVIAGQANKVIASELNLSQRTVEIHRANVMDKMQVRSLAELVTL 207 >UniRef50_A5W547 Transcriptional regulator, LuxR family n=5 Tax=Pseudomonas RepID=A5W547_PSEP1 Length = 303 Score = 39.3 bits (90), Expect = 0.063, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 5/116 (4%) Query: 57 AIKFLEKLDAE---RIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQ 113 ++ F +KLD + R ++ P+ ++ L K SR +N+LE L + S Sbjct: 165 SLAFTDKLDGQSRTRFGLITPWVLAVL-GKHFAGLDSRAGRFENILEQRIHAALNNFGSS 223 Query: 114 LCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTL 169 L + + +I QLIL+ + ++ L +S+ T+K + N+ KL + S++ +L Sbjct: 224 L-LTERECRIAQLILRGHSTRSLAERLGVSEDTIKSHRKNVYVKLDIGTQSELFSL 278 >UniRef50_C1F244 Two-component system response regulator n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F244_ACIC5 Length = 214 Score = 38.5 bits (88), Expect = 0.089, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 32/52 (61%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIV 167 + + +++QL+ + K+ S L S T++ Q+ N+M KL+LR +SD+V Sbjct: 152 LTPREGEVLQLLAEGKSTKEAASVLGTSTFTVETQRKNVMRKLRLRNVSDLV 203 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B7LQG5 Putative HTH-type transcriptional regulator dctR... 228 8e-59 UniRef50_Q83J60 HTH-type transcriptional regulator dctR n=59 Tax... 221 9e-57 UniRef50_P63206 Transcriptional regulator gadE n=61 Tax=Enteroba... 214 1e-54 Sequences not found previously or not previously below threshold: UniRef50_C7PCU2 Two component transcriptional regulator, LuxR fa... 48 2e-04 UniRef50_B5JLG5 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi... 47 3e-04 UniRef50_B7GMR0 DNA-binding response regulator, NarL family (REC... 45 9e-04 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 45 0.001 UniRef50_B8CMA1 Response regulator containing a CheY-like receiv... 45 0.001 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 45 0.001 UniRef50_Q2SQ58 Response regulator containing a CheY-like receiv... 45 0.001 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 45 0.001 UniRef50_C7PDL7 Two component transcriptional regulator, LuxR fa... 45 0.001 UniRef50_B2KBW2 Two component transcriptional regulator, LuxR fa... 44 0.002 UniRef50_A8G0P8 Two component transcriptional regulator, LuxR fa... 44 0.002 UniRef50_Q2JYB4 Probable two-component response regulator protei... 44 0.002 UniRef50_Q04VJ6 Receiver component of a two-component response r... 44 0.003 UniRef50_Q3JL34 DNA-binding response regulator n=30 Tax=pseudoma... 43 0.004 UniRef50_Q3JAH3 Two component transcriptional regulator, LuxR fa... 43 0.005 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 43 0.005 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 43 0.005 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 43 0.005 UniRef50_B1ZN14 Two component transcriptional regulator, LuxR fa... 42 0.006 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 42 0.007 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 42 0.007 UniRef50_B2VL70 Putative uncharacterized protein n=1 Tax=Erwinia... 42 0.007 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 42 0.007 UniRef50_A9BWP2 Two component transcriptional regulator, LuxR fa... 42 0.008 UniRef50_Q21X49 Two component transcriptional regulator, LuxR fa... 42 0.010 UniRef50_B4ELF5 Two-component regulatory system, response regula... 42 0.010 UniRef50_C1A5E6 NarL family two-component response regulator n=1... 42 0.010 UniRef50_A4JQY4 Response regulator receiver protein n=1 Tax=Burk... 42 0.012 UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opit... 42 0.013 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 42 0.013 UniRef50_C5V4D3 Transcriptional regulator, LuxR family n=1 Tax=G... 41 0.015 UniRef50_C4K7T4 Putative transcriptional regulator, response reg... 41 0.016 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 41 0.018 UniRef50_Q11XC0 Fimbrial Z protein; probable signal transducer n... 41 0.020 UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa... 41 0.022 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 40 0.024 UniRef50_B6R3D7 Transcriptional regulatory protein FixJ n=1 Tax=... 40 0.024 UniRef50_Q0K3Q8 Response regulator, NarL-family n=1 Tax=Ralstoni... 40 0.025 UniRef50_C4SF83 Response regulator containing a CheY-like receiv... 40 0.026 UniRef50_Q9RLW5 Virulence protein A n=1 Tax=Klebsiella pneumonia... 40 0.026 UniRef50_Q021D5 Two component transcriptional regulator, LuxR fa... 40 0.037 UniRef50_A5W4E2 Response regulator receiver protein n=4 Tax=Pseu... 40 0.037 UniRef50_C4UMU0 Putative uncharacterized protein n=1 Tax=Yersini... 40 0.042 UniRef50_C3BGJ6 Two component transcriptional regulator, LuxR n=... 40 0.044 UniRef50_B5XXE8 Transcriptional regulator, LuxR family n=3 Tax=E... 40 0.046 UniRef50_C4UE15 Positive transcription regulator evgA n=1 Tax=Ye... 40 0.046 UniRef50_B3PWQ9 Two-component response regulator nitrogen regula... 40 0.047 UniRef50_C1F244 Two-component system response regulator n=1 Tax=... 40 0.049 UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa... 40 0.049 UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR fa... 40 0.051 UniRef50_P0ACZ6 Positive transcription regulator evgA n=68 Tax=E... 39 0.051 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 39 0.053 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 39 0.055 UniRef50_D0LIL7 Transcriptional regulator, LuxR family n=1 Tax=H... 39 0.056 UniRef50_A0KNC9 Transcriptional regulatory protein FixJ n=1 Tax=... 39 0.057 UniRef50_B1T1G9 Two component transcriptional regulator, LuxR fa... 39 0.057 UniRef50_UPI00017452CB response regulator with a HTH DNA-binding... 39 0.057 UniRef50_A1SCH1 Regulatory protein, LuxR n=2 Tax=Nocardioides sp... 39 0.063 UniRef50_B0TSG4 Two component transcriptional regulator, LuxR fa... 39 0.064 UniRef50_A3HUJ9 Transcriptional regulator, LuxR family protein n... 39 0.066 UniRef50_Q2YB36 Two component transcriptional regulator, LuxR fa... 39 0.067 UniRef50_A1ATT6 Two component transcriptional regulator, LuxR fa... 39 0.069 UniRef50_Q475M9 Regulatory protein, LuxR:Response regulator rece... 39 0.070 UniRef50_A5EP63 Sensor protein n=1 Tax=Bradyrhizobium sp. BTAi1 ... 39 0.071 UniRef50_B0UG66 Two component transcriptional regulator, LuxR fa... 39 0.072 UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR fa... 39 0.072 UniRef50_B5JQZ3 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi... 39 0.073 UniRef50_UPI0001969032 hypothetical protein BACCELL_01743 n=1 Ta... 39 0.077 UniRef50_D0FXM2 LuxR family transcriptional regulator n=3 Tax=Er... 39 0.077 UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax... 39 0.077 UniRef50_B6J0B9 Response regulator n=18 Tax=Coxiella burnetii Re... 39 0.079 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 39 0.080 UniRef50_C0YN07 LuxR family transcriptional regulator protein n=... 39 0.085 UniRef50_C1ZGK9 Response regulator containing a CheY-like receiv... 39 0.086 UniRef50_Q3JAP2 Two component transcriptional regulator, LuxR fa... 38 0.089 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 38 0.092 UniRef50_Q5E1C3 Two component response regulator n=17 Tax=Gammap... 38 0.095 UniRef50_UPI00016AE77A regulatory protein, LuxR:Response regulat... 38 0.095 UniRef50_A6GNE3 Two component transcriptional regulator, LuxR fa... 38 0.100 >UniRef50_B7LQG5 Putative HTH-type transcriptional regulator dctR, Probable repressor of dctA dicarboxylate transporter gene n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LQG5_ESCF3 Length = 187 Score = 228 bits (581), Expect = 8e-59, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 84/175 (48%) Query: 1 MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKF 60 M ++TKD+ L L + +++ + +I V ++ +IIDT N++ + Sbjct: 12 MFLVITKDTVLFNAITFLLNKSQVVHVQDEDDIDLVLHQHCHIIIDTLMNNVFHSAMAEK 71 Query: 61 LEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQ 120 +++L E++IV +P+ I + P+ FV R S+ + + + P + + S Q Sbjct: 72 IKQLRPEQVIVFSPFIIKRCLGDIPVTFVLRNISLIDFMVLVNRGLCPAPEADIMLSRKQ 131 Query: 121 FKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 +++ I + +I + IS +T K ++M L LRR+++++ SY Sbjct: 132 HQVLSYIAQQMQTEDILQKMQISLKTFYCHKHSVMMILNLRRITELIKYPHVSYL 186 >UniRef50_Q83J60 HTH-type transcriptional regulator dctR n=59 Tax=Enterobacteriaceae RepID=DCTR_SHIFL Length = 176 Score = 221 bits (563), Expect = 9e-57, Method: Composition-based stats. Identities = 42/175 (24%), Positives = 81/175 (46%) Query: 1 MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKF 60 M ++T+D+ + ++ I + EI + ++ VIIDT N++ + Sbjct: 1 MFLIITRDTMFFTAMKNILSKGNVVHIQNEEEIDVMLHQNAFVIIDTLMNNVFHSNFLTQ 60 Query: 61 LEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQ 120 +E+L +IV +P++I + K P+ FV R +I + + + G + + + S Q Sbjct: 61 IERLKPVHVIVFSPFNIKRCLGKVPVTFVPRTITIIDFVALINGSYCSVPEANVSLSRKQ 120 Query: 121 FKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 +++ I +I L IS +T K NIM L L+R++++V Y Sbjct: 121 HQVLSCIANQMTTEDILEKLKISLKTFYCHKHNIMMILNLKRINELVRHQHIDYL 175 >UniRef50_P63206 Transcriptional regulator gadE n=61 Tax=Enterobacteriaceae RepID=GADE_ECO57 Length = 175 Score = 214 bits (544), Expect = 1e-54, Method: Composition-based stats. Identities = 175/175 (100%), Positives = 175/175 (100%) Query: 1 MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKF 60 MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKF Sbjct: 1 MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKF 60 Query: 61 LEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQ 120 LEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQ Sbjct: 61 LEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQ 120 Query: 121 FKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 FKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF Sbjct: 121 FKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 >UniRef50_C7PCU2 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PCU2_CHIPD Length = 220 Score = 47.7 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 32/61 (52%) Query: 111 NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLG 170 + S +F++MQ+I + + I +LNIS +T++ + NI KL L + ++ Sbjct: 149 EAHHKLSKTEFRVMQMIAEGMSTKEIAQSLNISIKTVENHRHNISKKLNLTGHNSLIKYA 208 Query: 171 I 171 I Sbjct: 209 I 209 >UniRef50_B5JLG5 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLG5_9BACT Length = 225 Score = 46.9 bits (110), Expect = 3e-04, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 109 HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVT 168 +S++ S + +I+QL+ ++ + I S LNIS +T+ + NIM KL L ++ + Sbjct: 155 AASSEIPLSDREKQILQLVAESFSTKEIASRLNISVRTVDNHRTNIMRKLNLHDVAALTR 214 Query: 169 LGI 171 I Sbjct: 215 YAI 217 >UniRef50_B7GMR0 DNA-binding response regulator, NarL family (REC-HTH domains) n=4 Tax=Bacillaceae RepID=B7GMR0_ANOFW Length = 206 Score = 45.4 bits (106), Expect = 9e-04, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 84/188 (44%), Gaps = 22/188 (11%) Query: 2 IFLMTKDSFLLQGFWQLKDNHE-------MIKINSLSEIKKVGNKPFKVIIDTYHNHILD 54 + L+ + +++G +L E ++ ++ L E + N +++D Sbjct: 11 VLLVDDHALMIEGVKELLGREEDMHVVGTVLHLSQLQESIETLNPHV-IVMDIRLKDGNG 69 Query: 55 EEAIKFLEKLDAE-RIIVLAPYH----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPH 109 E K ++ L + ++++L+ Y+ I K FV ++ESI L G + Sbjct: 70 LEWTKKMKMLYPDCKVVILSGYNYSEYIRAAKHAGASAFVVKEESILQLANAIRGAYEGF 129 Query: 110 --------KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKL- 160 + + + + I++LI ++K NI+ +LNIS++T++ I+ KL++ Sbjct: 130 AFFPNDVDEEENISLTKMELVILKLIAQDKTNENISHSLNISRRTVEHHVSTIIKKLRVD 189 Query: 161 RRMSDIVT 168 R+ +V Sbjct: 190 SRVGAVVK 197 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 45.0 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 2/84 (2%) Query: 88 FVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 F+++ + K L+I +G+ ++ + + +I +IL+ + I LN+S +T+ Sbjct: 124 FINQAVAEKLTLQILHGRDTDAPHTG--LTDREHQIFLMILQGLGVTEIGRQLNLSVKTV 181 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGI 171 K +I+ K+ LR +++V I Sbjct: 182 STHKASILAKMNLRNSAELVRYAI 205 >UniRef50_B8CMA1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Gammaproteobacteria RepID=B8CMA1_SHEPW Length = 196 Score = 45.0 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 77/172 (44%), Gaps = 17/172 (9%) Query: 18 LKDNHEMIKI--NSLSEIKKV-GNKPFKVIIDTYHNHILDEEAIKFLEKLDAERIIVLAP 74 LK H+++ I + ++ V + P VI D + A+ L+++ + ++ Sbjct: 21 LKAEHQVLAIAKDGEELVELVKQHDPELVITDISMPGMTGIAAVAALKRIKKDLRVICLT 80 Query: 75 YHISKLKAKAPIY-----FVSRKESIKNLLEITYG---------KHLPHKNSQLCFSHNQ 120 H + A+ I +V + E+ +L++ K + ++S S Q Sbjct: 81 MHDEQEYAEGAIAAGALGYVLKHEATDDLVDAVNSVLAGKQYLSKSVQVEDSAPTLSARQ 140 Query: 121 FKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGIT 172 +++L+ + K+ + L IS +T++ K++IM ++ + ++++ ++ Sbjct: 141 LSVLRLLAQGKSAKQVADALFISPRTVEFHKYSIMKLIEAKSSAELIQYALS 192 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 45.0 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 75/204 (36%), Gaps = 32/204 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKV-IIDTYHNHILDE 55 I L + + I+I N I + ++P + +D + Sbjct: 5 IVLADDHQMFRHALRAMLEKEPGIRIVGEASNGDELIDLISHQPVDIACVDIGMPGMNGI 64 Query: 56 EAIKFLEKLDA-ERIIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITYG------ 104 EA + L + R+I L+ + + L +V++ E+ + LL + Sbjct: 65 EATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQQSKT 124 Query: 105 KHLPHKNSQLC---------------FSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 P + + + + +++QLI + + I L+++ T+++ Sbjct: 125 YLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLAPSTVEV 184 Query: 150 QKFNIMYKLKLRRMSDIVTLGITS 173 + NIM KL L ++++ I S Sbjct: 185 HRRNIMRKLDLHSVAELTKYAIRS 208 >UniRef50_Q2SQ58 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ58_HAHCH Length = 207 Score = 45.0 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 72/196 (36%), Gaps = 33/196 (16%) Query: 3 FLMTKDSFLLQG-----FWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEA 57 F++T D + + L + E+++ S SE+ ++ N V + + D + Sbjct: 5 FVITDDHGIFRSGLKLIISGLYPDAEILEAASGSEVFRLLNANTDVDLVLLDLSMPDSQG 64 Query: 58 IKFLEKLDAERIIVLAPYHISKL---------------KAKAPIYFVSRKESIKNLLEIT 102 ++ L KL E V+ P+ + P + + L ++ Sbjct: 65 LELLRKLKQE--FVMTPFAVISASEEAALIQGAIQLGALGYVPKSSSNAVIASAIQLMLS 122 Query: 103 YGKHLPH-----------KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 G ++PH +C + Q +++ L+ + + I + L+I+ T+K Sbjct: 123 GGVYIPHELLRTGHDEGMPTGDICLTPRQHEVLGLLAEGMSNKQIGTKLSIAPGTIKAHI 182 Query: 152 FNIMYKLKLRRMSDIV 167 I +L + V Sbjct: 183 AAIFRELNAANRTQAV 198 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 45.0 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 35/70 (50%) Query: 102 TYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLR 161 T G +S + S + +++QLI + I T +S +T+ +Q+ ++M KL L Sbjct: 149 TKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGVSIKTVAVQRMSVMKKLNLF 208 Query: 162 RMSDIVTLGI 171 ++D+ + Sbjct: 209 NVADLTKYAV 218 >UniRef50_C7PDL7 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PDL7_CHIPD Length = 210 Score = 44.6 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 35/56 (62%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGI 171 S + +I++ + + N I+S+L IS+ T+K + NIM+KL ++ ++++ L I Sbjct: 150 LSEREKEIIKCLAEGMNTKAISSSLYISEHTVKTHRRNIMHKLNVKTSAELIRLAI 205 >UniRef50_B2KBW2 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBW2_ELUMP Length = 215 Score = 44.2 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 33/68 (48%) Query: 104 GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRM 163 GK P K + + +I+QLI + + I +S T+ + + NIM KL + + Sbjct: 141 GKASPSKKDPSGLTPKEKQILQLIAEGFSSKEIAKEFGLSLNTVHVHRNNIMRKLDIHKQ 200 Query: 164 SDIVTLGI 171 +++V I Sbjct: 201 AELVRYAI 208 >UniRef50_A8G0P8 Two component transcriptional regulator, LuxR family n=16 Tax=Gammaproteobacteria RepID=A8G0P8_SHESH Length = 209 Score = 44.2 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 71/195 (36%), Gaps = 28/195 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDN--HEMIKINSLSEI--KKVGNKPFKVIIDTYHNHILDEEA 57 ++L+ D +L + + + N+ + +P VI+D+ + +E Sbjct: 7 LYLVDDDIAILDSLSFMLGQFGYNITAFNNGDDFLNTVPLERPACVILDSRMPEVSGQEV 66 Query: 58 IKFLEKLDAERIIVLAPYHISKLKAKAPIY----------FVSRKESIKNLLEITYGKHL 107 + L ++D+ I+ H P+ F + S K L L Sbjct: 67 QQKLLEIDSPLGIIFLTGH-----GDMPMAVDAFRKGACDFFQKPVSGKALSCAIDKAML 121 Query: 108 ---------PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKL 158 K S + +++ L+ K I+ L +S +T+++ + +M KL Sbjct: 122 YSHRTFEAQSLKRKLSTLSEREQEVLNLLTKGMTNKQISEALFLSLRTIEVHRAKVMKKL 181 Query: 159 KLRRMSDIVTLGITS 173 ++ M+++ S Sbjct: 182 EVHNMAELAKYSQMS 196 >UniRef50_Q2JYB4 Probable two-component response regulator protein n=1 Tax=Rhizobium etli CFN 42 RepID=Q2JYB4_RHIEC Length = 217 Score = 43.8 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 73/181 (40%), Gaps = 30/181 (16%) Query: 18 LKDNHEMIKINSLSEIKKVGNKPFK------------------VIIDTYHNHILDEEAIK 59 L N + + EI+ +G++P VIID LD + + Sbjct: 26 LVSNDLVFHRSLDEEIQSLGSRPASFSSARDFLTHARDARFACVIIDNTVPD-LDVDVLT 84 Query: 60 FLEKLDAER--IIVLAP---YHISKLKAKAPIYFVSRKESIKNLLEITYGKH-LPHKNSQ 113 L L A R +IVL ++ + P+ F+ R NL+++ SQ Sbjct: 85 LLICLQAVRHPVIVLTSEGDSQVTLTATRYPVTFLPRPFGTDNLVQLIRSSVEATISISQ 144 Query: 114 L-----CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVT 168 L S + ++MQ +++ + LNIS T+K + +M K++ R + ++V Sbjct: 145 LDCRYQSLSARERQVMQFVVEGLLNKQVAYKLNISVITVKAHRGQVMRKMRARSLPELVN 204 Query: 169 L 169 + Sbjct: 205 M 205 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 43.8 bits (102), Expect = 0.003, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 109 HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVT 168 K + S + +I++L+ + + +I L IS T+K+ + NIM KL L +++D+V Sbjct: 152 AKKAFSVLSDREREILKLVAEGNSNESIGKILGISPATVKVHRANIMKKLNLHKVADLVM 211 Query: 169 LGI 171 I Sbjct: 212 YAI 214 >UniRef50_Q3JL34 DNA-binding response regulator n=30 Tax=pseudomallei group RepID=Q3JL34_BURP1 Length = 223 Score = 43.1 bits (100), Expect = 0.004, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 27/52 (51%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIV 167 + + ++++LI I S LNIS +T+ + +M KL R ++ ++ Sbjct: 156 LTRREKQVLKLIADGMRNREIASLLNISPKTVDCHRQRLMQKLGARNVATVI 207 >UniRef50_Q3JAH3 Two component transcriptional regulator, LuxR family n=2 Tax=Nitrosococcus oceani RepID=Q3JAH3_NITOC Length = 201 Score = 42.7 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%) Query: 108 PHKNSQL-CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDI 166 P K +QL + + ++ +L+ + K +I + L IS +T++ + NIM KLK+R ++DI Sbjct: 133 PEKLAQLESLTRRERQVFKLLAQGKMNKHIAAELCISIRTVETHRANIMEKLKVRSLADI 192 Query: 167 VTLGITSYF 175 V L I Sbjct: 193 VRLAILETL 201 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 42.7 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 38/80 (47%), Gaps = 4/80 (5%) Query: 94 SIKNLLEITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFN 153 ++ + L + G + + + +++QLI + I L+I+ T+++ + N Sbjct: 133 TVADALRDSPGVYAAAPR----LTARERQVLQLIAEGLTSVQIGDRLHIAASTVEVHRRN 188 Query: 154 IMYKLKLRRMSDIVTLGITS 173 +M KL L ++++ I S Sbjct: 189 LMRKLDLHNVAELTRYAIHS 208 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 42.7 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 33/61 (54%) Query: 111 NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLG 170 ++ + + +++QLI + N N LNI+ +T+ + IM KLK+R ++++ Sbjct: 147 QPEVPLTPREREVLQLIAEGNNAKNAAYQLNINVKTVDTHRQQIMKKLKMRSVAELTKYA 206 Query: 171 I 171 I Sbjct: 207 I 207 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 42.7 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 39/85 (45%) Query: 87 YFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 +F SR + E SQ + + +I+QL+ + + ++ LNIS +T Sbjct: 129 FFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGKALNISVKT 188 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGI 171 + + IM KL + ++D+V I Sbjct: 189 AETHRARIMAKLGIDSVADLVRYAI 213 >UniRef50_B1ZN14 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B1ZN14_OPITP Length = 215 Score = 42.3 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 61/156 (39%), Gaps = 25/156 (16%) Query: 39 KPFKVIIDTYHNHILDEEAIKFL-EKLDAERIIVLA----PYHISKLKAKAPIYFVSRKE 93 KP +++D + + ++ + +KL R++V + P I ++ FV + Sbjct: 47 KPDLLVLDAKLPGLNGVDLLRRISKKLSGMRVLVFSGHENPVLIREMLEAGAHGFVEKTA 106 Query: 94 SIKNL-----------------LEITYGKHLPHKNSQLC---FSHNQFKIMQLILKNKNE 133 + + + + ++ + + +I+QL+ ++ + Sbjct: 107 GLFEFKKGLETVASGGTYFGPAVAALLRNVVANPSASNTADFLTDREREILQLVAESHST 166 Query: 134 SNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTL 169 I + L IS +T+ + N+M KL L ++ + Sbjct: 167 KEIAAKLGISIKTVDNHRTNLMRKLNLHDVASLTRY 202 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 42.3 bits (98), Expect = 0.007, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%) Query: 94 SIKNLLEITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFN 153 SI +++ Y L + + + +I+ L+ + + L++S +T+ + + Sbjct: 128 SISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIKTVGTHRQH 187 Query: 154 IMYKLKLRRMSDIVTLGI 171 IM KLKL+ ++D+V I Sbjct: 188 IMNKLKLKNLADLVKYAI 205 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 42.3 bits (98), Expect = 0.007, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 28/54 (51%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTL 169 S + +I+ LI K +I L +S +T++ K +IM KL L+ ++V Sbjct: 156 LSKRELEILPLIAKGYGNKDIAEKLFVSVKTVEAHKTHIMTKLNLKSKPELVEY 209 >UniRef50_B2VL70 Putative uncharacterized protein n=1 Tax=Erwinia tasmaniensis RepID=B2VL70_ERWT9 Length = 200 Score = 42.3 bits (98), Expect = 0.007, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 29/55 (52%) Query: 112 SQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDI 166 + L + ++ +++ + + + ++ L IS +T+ K ++M KL +R ++ Sbjct: 129 ALLKLTRSEVRVISCMAQEMSPVSLPQYLKISPKTISAHKRSVMRKLGFKRNEEL 183 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 42.3 bits (98), Expect = 0.007, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 28/56 (50%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGI 171 S +F++M + + I L IS +T+ + +++ KL+LR SDI I Sbjct: 150 LSKREFQVMTHLAQGMTNREIAGVLQISVKTVDTHRSHVLKKLELRNNSDITRFAI 205 >UniRef50_A9BWP2 Two component transcriptional regulator, LuxR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BWP2_DELAS Length = 218 Score = 41.9 bits (97), Expect = 0.008, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 33/71 (46%) Query: 101 ITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKL 160 + G+ L + + S + +++ L + S I L S +T+ K +M KL + Sbjct: 139 LLGGEWLGAVRTSIELSKREEEVLLLFISGMTVSEIAKKLYRSIKTVSTHKVAVMNKLGI 198 Query: 161 RRMSDIVTLGI 171 R+ D++ GI Sbjct: 199 RKDIDLIRYGI 209 >UniRef50_Q21X49 Two component transcriptional regulator, LuxR family n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21X49_RHOFD Length = 487 Score = 41.9 bits (97), Expect = 0.010, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 28/60 (46%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 S Q ++++L+ + I L IS T+ + ++M KL L ++++ + S Sbjct: 425 ISARQRQVLELVAMGCTSAQIAEKLQISPATVVTHRRDLMGKLDLHTVAELTRYAMQSKL 484 >UniRef50_B4ELF5 Two-component regulatory system, response regulator protein n=5 Tax=Burkholderiaceae RepID=B4ELF5_BURCJ Length = 238 Score = 41.9 bits (97), Expect = 0.010, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 30/59 (50%) Query: 108 PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDI 166 ++ L S + ++++ L + S+I S + S +T+ QK + KL +R +++ Sbjct: 167 SGPSADLRLSPREHEVLRCFLAGMSVSDIASKFSRSPKTISAQKQSAFRKLGIRSDAEL 225 >UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E6_GEMAT Length = 213 Score = 41.5 bits (96), Expect = 0.010, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 27/56 (48%) Query: 114 LCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTL 169 + + + +++QLI S + LNIS T + N+M KL + ++V + Sbjct: 145 VSLTAREREVLQLIANGLTTSAVAEALNISPHTATRHRANLMQKLNVHNQVELVRI 200 >UniRef50_A4JQY4 Response regulator receiver protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JQY4_BURVG Length = 260 Score = 41.5 bits (96), Expect = 0.012, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 24/53 (45%) Query: 108 PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKL 160 PH N + S Q + + + + K S+I L IS+ T++ M L + Sbjct: 191 PHPNEFIQLSPRQRQCLSWVAQGKTSSDICMILKISRHTVEYHITEAMRVLNV 243 >UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9E4_9BACT Length = 227 Score = 41.5 bits (96), Expect = 0.013, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 60/148 (40%), Gaps = 17/148 (11%) Query: 38 NKPFKVIIDTYHNHILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIY-----FVSRK 92 + P V+ D + + I+ ++ I++ H ++L FV + Sbjct: 48 HNPDIVVADLSMPGVTGLDLIQQIKDAGLLTRIIMLTMHRTRLTVHEAFSVGANAFVLKS 107 Query: 93 ESIKNLLEITYGKH----------LP--HKNSQLCFSHNQFKIMQLILKNKNESNITSTL 140 ++ ++L++I + H LP S + +++ I + I+ L Sbjct: 108 DAFEDLVDIIHRVHEGENTLTSKGLPPYEPACAATLSPREKDVLEGISAGLSNKEISRRL 167 Query: 141 NISQQTLKIQKFNIMYKLKLRRMSDIVT 168 IS +T++ + IM KL + + +++V Sbjct: 168 AISSKTVETHRSRIMQKLNVTKATELVR 195 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 41.5 bits (96), Expect = 0.013, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTL 169 S + K++ LI I L IS +T++ K+ IM KL ++ SD+V Sbjct: 152 LSDQEKKVLSLIAAGYANREIAEQLVISVKTVETYKYRIMEKLNCKKRSDLVKF 205 >UniRef50_C5V4D3 Transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D3_9PROT Length = 491 Score = 41.1 bits (95), Expect = 0.015, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 26/56 (46%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGI 171 S ++ LI + I + LNISQ T+ + N+M KL L +++ I Sbjct: 429 LSRRHLDVIGLIAAGLTSAQIAARLNISQTTVITHRRNLMRKLGLHSAAELTAYAI 484 >UniRef50_C4K7T4 Putative transcriptional regulator, response regulator receiver and GerE domains n=2 Tax=Enterobacteriaceae RepID=C4K7T4_HAMD5 Length = 207 Score = 41.1 bits (95), Expect = 0.016, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 26/51 (50%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDI 166 S + +++ + K +I + IS +T+ K +MYKL+L M D+ Sbjct: 147 LSTKELQVLSCLSKGMKILDIAEQMKISHKTVSTYKSRMMYKLQLNNMVDL 197 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 40.8 bits (94), Expect = 0.018, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 28/161 (17%) Query: 39 KPFKVIIDTYHNHILDEEAIKFLEKLDA-ERIIVLAPY----HISKLKAKAPIYFVSRKE 93 KP VI+D ++ A + + + R+I L+ + +I ++ I +V + Sbjct: 47 KPDIVIMDITMPNMNGSIATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDS 106 Query: 94 SIKNLLEITY----GKHLPHKN-----SQLC--------------FSHNQFKIMQLILKN 130 + L + GK+ + + C S + +++QLI + Sbjct: 107 AFAELFDAIQAVGRGKYYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEG 166 Query: 131 KNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGI 171 I L +S +T++ + NIM KL + ++ + I Sbjct: 167 VKTRQIAERLFVSIKTVEAHRRNIMNKLMISSVAGLTRFAI 207 >UniRef50_Q11XC0 Fimbrial Z protein; probable signal transducer n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11XC0_CYTH3 Length = 212 Score = 40.8 bits (94), Expect = 0.020, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 46/90 (51%) Query: 78 SKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNIT 137 +L + +++ + ++ ++ L ++ S FS + ++++ I K ++ I Sbjct: 111 EELLHAVQQVYTNKEYYVSDVTQVLLKGFLANQTSDSIFSDRELEVLRYICKGRSNEQIA 170 Query: 138 STLNISQQTLKIQKFNIMYKLKLRRMSDIV 167 L IS++T+ + NIM K +++ ++++ Sbjct: 171 DILFISEKTIATHRRNIMKKAGVKKSTELI 200 >UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI Length = 218 Score = 40.8 bits (94), Expect = 0.022, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 33/61 (54%) Query: 111 NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLG 170 Q S+ + +I+Q ++ + I L +S +T+ + N+M +L++R +++V + Sbjct: 153 ERQSKLSNKEKEILQFLVDGMSSREIAEKLQLSVRTVDNHRANMMRRLQVRNAAELVRMA 212 Query: 171 I 171 + Sbjct: 213 V 213 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 40.4 bits (93), Expect = 0.024, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 28/56 (50%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGI 171 + + ++++L + + I L IS +T++ + NIM KL L D+V I Sbjct: 156 LTERELEVLRLAAEGLTNAEIARRLVISVKTVQAHRANIMQKLGLHDRVDLVKYAI 211 >UniRef50_B6R3D7 Transcriptional regulatory protein FixJ n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R3D7_9RHOB Length = 225 Score = 40.4 bits (93), Expect = 0.024, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 32/54 (59%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTL 169 ++ + ++M + + +I + L +S +T++I + N++ KL+++ + D+ L Sbjct: 154 LTNREREVMGYLAQGLQNKSIANALGLSVKTVEIHRHNVLTKLEVQTLVDVYQL 207 >UniRef50_Q0K3Q8 Response regulator, NarL-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K3Q8_RALEH Length = 219 Score = 40.4 bits (93), Expect = 0.025, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 28/54 (51%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTL 169 + + +I+ LI + +I + L+IS T + + N+M KL L +++V Sbjct: 149 LTRRELQILMLIARGATAGDIAAQLDISPLTARKHRENLMRKLDLHNTAEVVAY 202 >UniRef50_C4SF83 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Yersinia mollaretii ATCC 43969 RepID=C4SF83_YERMO Length = 205 Score = 40.4 bits (93), Expect = 0.026, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 15/116 (12%) Query: 65 DAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHL----------PHKNSQL 114 ++ I+VL+ I+ +K + P F R +S++ LL + + P K + Sbjct: 72 KSQLIMVLSQQEINSVKHQTPWVFY-RNQSLETLLALVDQALMASVIKGNKKEPEKQRDI 130 Query: 115 C----FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDI 166 + Q +I+ + + S I L I ++T+ K + M +L+L + +D+ Sbjct: 131 SHLDILTRRQKQIINYVSEGICPSKIADNLQIHEKTVSSHKRSAMKRLQLNKTTDL 186 >UniRef50_Q9RLW5 Virulence protein A n=1 Tax=Klebsiella pneumoniae RepID=Q9RLW5_KLEPN Length = 207 Score = 40.4 bits (93), Expect = 0.026, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 13/95 (13%) Query: 88 FVSRKESIKNLLEITY---GKH----------LPHKNSQLCFSHNQFKIMQLILKNKNES 134 F+S+KES+ N + + P +N L S + KIM+ I+ Sbjct: 106 FISKKESMDNFVAAIQAVQRGYYYFPLPSYNPTPAENKILSLSEQEIKIMRYIVSGAPNQ 165 Query: 135 NITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTL 169 NI + +NI+ +T+ K +M KL + + D+ Sbjct: 166 NIAAEMNINPKTVSTYKRRLMGKLNCKTLKDLFVF 200 >UniRef50_Q021D5 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q021D5_SOLUE Length = 210 Score = 40.0 bits (92), Expect = 0.037, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 76/195 (38%), Gaps = 25/195 (12%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSE-----IKKVGNKPFKVII-DTYHNHILDE 55 + L+ S + +GF ++ ++ I + +E ++ G +V++ D + Sbjct: 8 VLLVDDHSLVRRGFRRMLEDDPAIVVVGEAEDGHQAVQLAGELHPRVVVMDFAMPSMNGA 67 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITY----GKH 106 A + + + E I++ H + ++ + ++ GK Sbjct: 68 VAARHILRTAPETAILILSMHAEASYVRTCLEAGVRGYLLKNALDLEMVAAVKQVAAGKQ 127 Query: 107 ----------LPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMY 156 LP + + + +++QLI+ K+ I + L++S T+ + + NIM Sbjct: 128 VLDRRLGALDLPSGAAPAGLTTRELEVLQLIVHGKSNKEIAAVLSLSANTVAVHRANIMQ 187 Query: 157 KLKLRRMSDIVTLGI 171 L + +++V I Sbjct: 188 TLGIHNTAELVVYAI 202 >UniRef50_A5W4E2 Response regulator receiver protein n=4 Tax=Pseudomonas RepID=A5W4E2_PSEP1 Length = 206 Score = 40.0 bits (92), Expect = 0.037, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 32/59 (54%) Query: 110 KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVT 168 K + S + ++++ +L+ L+IS+ T+K+ + NIM K+K+ + D+V Sbjct: 138 KENYESLSKREQQVLKFVLRGYLNKQTALELDISEATVKVHRHNIMRKMKVSSIQDLVR 196 >UniRef50_C4UMU0 Putative uncharacterized protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UMU0_YERRU Length = 179 Score = 39.6 bits (91), Expect = 0.042, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 59/137 (43%), Gaps = 18/137 (13%) Query: 39 KPFKVIIDTYHNHILDEEAIKFLEKLD----AERIIVL----APYHISKLKAKAPIYFVS 90 +P VI D ++++ + +K LE L +++V +P+ L + ++ Sbjct: 26 QPQLVIAD-LYSYVFETHNLKILESLLATCIPSKLLVYLHSPSPWLSQYLLDRGAWKVIT 84 Query: 91 RKESIKNLLEITYGKHL---------PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLN 141 +K +I L ++ P + + FS + I+ L+ + I +TL+ Sbjct: 85 KKHNISQLEQLVSAALCNPMGSYSEHPLQPAPALFSDREESILNYWLEGWIDQRIANTLD 144 Query: 142 ISQQTLKIQKFNIMYKL 158 I+ +T+ K NI KL Sbjct: 145 INIKTVYTHKRNIRLKL 161 >UniRef50_C3BGJ6 Two component transcriptional regulator, LuxR n=5 Tax=Firmicutes RepID=C3BGJ6_9BACI Length = 201 Score = 39.6 bits (91), Expect = 0.044, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 33/62 (53%) Query: 110 KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTL 169 +N + S + +++Q ++K + S I L IS +T+ K ++ KL L + S++V Sbjct: 132 RNPYVILSPREREVLQFLVKGFSLSEIAQELTISIKTVDTHKTRMLNKLNLSKKSELVQY 191 Query: 170 GI 171 I Sbjct: 192 AI 193 >UniRef50_B5XXE8 Transcriptional regulator, LuxR family n=3 Tax=Enterobacteriaceae RepID=B5XXE8_KLEP3 Length = 206 Score = 39.6 bits (91), Expect = 0.046, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 13/97 (13%) Query: 86 IYFVSRKESIKNLLEITYGKHLPHKNSQLC-------------FSHNQFKIMQLILKNKN 132 I F+SR++S+ L +G + + S Q +IM + + + Sbjct: 93 IIFISRRDSVTRLRTALHGAWHRLQQTNTRQSSMSCCDCQPTRLSPQQIRIMTCLYEGMS 152 Query: 133 ESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTL 169 I L IS++T+ K+ +M K LR +++ L Sbjct: 153 VMQIADELMISEKTVYAHKYMVMRKFNLRNDYELMLL 189 >UniRef50_C4UE15 Positive transcription regulator evgA n=1 Tax=Yersinia aldovae ATCC 35236 RepID=C4UE15_YERAL Length = 215 Score = 39.6 bits (91), Expect = 0.046, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 46/113 (40%), Gaps = 21/113 (18%) Query: 75 YHISKLKAKAPIYFVSRKESIKNL---LEITYGKHLPHKNSQL----------------- 114 +++ + + F+S++ ++ + G + + Q Sbjct: 93 HYVKRCASAGADGFISKRNNLLGFTDAMRAIKGGYGYYPRDQSRKVAMSGSIEENGQSKI 152 Query: 115 -CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDI 166 S + ++++ ++K +I+ + IS +T+ K +M KL+L+ M ++ Sbjct: 153 STLSDKELQVLRFLVKGIKVVDISVKMQISDKTVSTYKRRLMLKLELKNMVEL 205 >UniRef50_B3PWQ9 Two-component response regulator nitrogen regulation protein n=7 Tax=Bacteria RepID=B3PWQ9_RHIE6 Length = 222 Score = 39.6 bits (91), Expect = 0.047, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 31/57 (54%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGIT 172 + + +++ +L I L IS +T+++ + N+M K+ R +++++ + +T Sbjct: 142 LTDREHQVLTGVLDGLQNKMIAYQLGISSRTVEVHRANVMAKMGARNLAELMRMAVT 198 >UniRef50_C1F244 Two-component system response regulator n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F244_ACIC5 Length = 214 Score = 39.6 bits (91), Expect = 0.049, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 35/60 (58%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 + + +++QL+ + K+ S L S T++ Q+ N+M KL+LR +SD+V + ++ Sbjct: 152 LTPREGEVLQLLAEGKSTKEAASVLGTSTFTVETQRKNVMRKLRLRNVSDLVRYAVRNHM 211 >UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT Length = 211 Score = 39.6 bits (91), Expect = 0.049, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Query: 100 EITYGKHLPHKNSQLCF-SHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKL 158 E+ Y +P N+ L S + +I +L+++ + +I+ L IS +T+ K N++ KL Sbjct: 133 ELAYTSAIPQANNSLALLSSREQEIFRLLVEGLSNDDISRQLFISDRTVSAHKINLLNKL 192 Query: 159 KLRRMSDIVTLGI 171 L+ + ++V I Sbjct: 193 GLKNVVELVHYSI 205 >UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H4_DESAH Length = 217 Score = 39.6 bits (91), Expect = 0.051, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 32/56 (57%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGI 171 S + +++ L+ + K+ I L IS +T++ + +IM +L LR ++D++ I Sbjct: 154 LSPREEEVLTLLAEGKSNKKIADILCISTRTVEHHRASIMKRLDLRTLADLIKYAI 209 >UniRef50_P0ACZ6 Positive transcription regulator evgA n=68 Tax=Enterobacteriaceae RepID=EVGA_ECO57 Length = 204 Score = 39.2 bits (90), Expect = 0.051, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 22/153 (14%) Query: 39 KPFKVIIDTYHNHILDEEAIKFLEKLDAERIIVLAP-----YHISKLKAKAPIYFVSRKE 93 KP VIID + + ++ L K II++ ++ FVS+KE Sbjct: 45 KPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKE 104 Query: 94 SIKNLLEITY-----------------GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNI 136 + N++ G + S + +M+ IL K+ ++I Sbjct: 105 GMNNIIAAIEAAKNGYCYFPFSLNRFVGSLTSDQQKLDSLSKQEISVMRYILDGKDNNDI 164 Query: 137 TSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTL 169 + IS +T+ K +M KL+ + + D+ T Sbjct: 165 AEKMFISNKTVSTYKSRLMEKLECKSLMDLYTF 197 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 39.2 bits (90), Expect = 0.053, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 79/205 (38%), Gaps = 35/205 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVG-NKPFKVIIDTYHNHILDE 55 I L + + +G L ++H ++ + + G + P V++D + Sbjct: 6 ILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMPGLNGI 65 Query: 56 EAIKFLEKLDAERIIVL------APYHISKLKAKAPIYFV---SRKESIKNLLEITYGKH 106 EA + + IV Y + LKA A Y + + + I ++ ++ GK Sbjct: 66 EAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAVSEGKA 125 Query: 107 LPHK--------------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 +S + + +++QL+ + KN + + LN+S T Sbjct: 126 FFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILNLSLYT 185 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGI 171 ++ + NI+ KL L ++++ I Sbjct: 186 VETHRGNILQKLNLHSGAELILYAI 210 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 39.2 bits (90), Expect = 0.055, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 25/59 (42%) Query: 111 NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTL 169 S + +++QLI I L IS +T++ I KL L R S++V Sbjct: 147 EKNYDLSDREKEVLQLIALGYTNKEIAEKLYISIKTVETHIARIKEKLGLNRRSELVRY 205 >UniRef50_D0LIL7 Transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIL7_HALO1 Length = 230 Score = 39.2 bits (90), Expect = 0.056, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 37/80 (46%), Gaps = 1/80 (1%) Query: 90 SRKESIKNLLEITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 R+ S +++ + + + S + ++ L++ K+ +I TL IS +T K Sbjct: 149 LRRISREDVSALV-RARVDLLAEEGSLSSREHSVLGLLVAGKSAEDIGGTLGISPRTAKF 207 Query: 150 QKFNIMYKLKLRRMSDIVTL 169 + NI+ KL + ++ L Sbjct: 208 HQTNILQKLNVDSRLELFRL 227 >UniRef50_A0KNC9 Transcriptional regulatory protein FixJ n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KNC9_AERHH Length = 203 Score = 39.2 bits (90), Expect = 0.057, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 74/188 (39%), Gaps = 21/188 (11%) Query: 2 IFLMTKDSFLLQGFWQLK---DNHEMIKINSLSEI--KKVGNKPFKVIIDTYHNHILDEE 56 ++L+ D +L + D ++ + ++P +I+D + E Sbjct: 9 LYLVDDDEAVLDSLRFMLESCDERQLFSFADGERFLAEVDLHQPACLILDCRMPGLSGPE 68 Query: 57 AIKFLEKLDAERIIVL------APYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 + L+ + I+ P + LK A + F+ + + LL Sbjct: 69 VQQRLKAAQSPIAILFLTGHGEVPLAVESLKLGA-VDFLQKPVQLAPLLAAIERAEQATL 127 Query: 111 NSQLCFSH---------NQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLR 161 ++ F+ + +++QLI + I L IS +T+++ + ++M +L++ Sbjct: 128 SAATRFAQLAAYQRLTPREHQLLQLIARGHKNQQIAQDLCISVRTVEVCRASLMKRLEVD 187 Query: 162 RMSDIVTL 169 +++++ L Sbjct: 188 SLAELMLL 195 >UniRef50_B1T1G9 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T1G9_9BURK Length = 204 Score = 39.2 bits (90), Expect = 0.057, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 62/158 (39%), Gaps = 21/158 (13%) Query: 39 KPFKVIIDTYHNHILDEEAIKFLEKLDA-ERIIVLAPYHIS----KLKAKAPIYFVSRKE 93 KP +I+D + + + I+ + DA +I+V + Y + A +V++ E Sbjct: 46 KPDLLIVDIDLDGMDGIDLIQRVRIKDATVKILVFSGYSAELFALRCHAAGANGYVNKSE 105 Query: 94 SIKNLLEITY----GKHL-----------PHKNSQL-CFSHNQFKIMQLILKNKNESNIT 137 + ++L G H ++ S + +++ + K + I Sbjct: 106 DVTHVLSAANAVLAGFHCFPLDINAMASGSGPHAAFAMLSERELTVLRYLAKGLSNKEIG 165 Query: 138 STLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 +L++S +T+ K NI+ KL + D+ + Sbjct: 166 DSLSLSNKTISTHKANILAKLGFTNVVDLAAFAKAHHL 203 >UniRef50_UPI00017452CB response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017452CB Length = 235 Score = 39.2 bits (90), Expect = 0.057, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 32/56 (57%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGI 171 S +F++ QLI + K+ I LNIS +T+++ + +I KLKL + ++ + Sbjct: 169 LSDREFEVFQLISEGKSTQQIGDALNISVKTVEVHRAHIREKLKLEDGASVLRYAV 224 >UniRef50_A1SCH1 Regulatory protein, LuxR n=2 Tax=Nocardioides sp. JS614 RepID=A1SCH1_NOCSJ Length = 574 Score = 39.2 bits (90), Expect = 0.063, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 27/60 (45%) Query: 110 KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTL 169 + S + +++ L+++ + + I L IS +T NI+ KL +R ++ Sbjct: 498 PRDGVVLSRREQEVLSLVVEGLSNAEIAERLFISVKTAGHHVSNILTKLGVRSRTEATAY 557 >UniRef50_B0TSG4 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=B0TSG4_SHEHH Length = 222 Score = 39.2 bits (90), Expect = 0.064, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 31/56 (55%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGI 171 + Q +I+QLI + + I +++S +T++ + +IM +L + ++ +V I Sbjct: 154 LTSRQRQILQLIAEGYSTREIAERMSVSIKTVETHRAHIMSRLNIFDIAGLVRFAI 209 >UniRef50_A3HUJ9 Transcriptional regulator, LuxR family protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3HUJ9_9SPHI Length = 269 Score = 39.2 bits (90), Expect = 0.066, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 29/56 (51%) Query: 114 LCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTL 169 + + + +I+++IL I LNIS T+ + NI+ KL + + ++V + Sbjct: 204 VSLTKKEKQIVKMILDGMKSKEIGQVLNISFNTVSTHRKNILRKLGAKNLGEMVKI 259 >UniRef50_Q2YB36 Two component transcriptional regulator, LuxR family n=3 Tax=Betaproteobacteria RepID=Q2YB36_NITMU Length = 217 Score = 38.8 bits (89), Expect = 0.067, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 6/122 (4%) Query: 48 YHNHILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHL 107 Y L A ++ K + ++V A + + LK ++S+ K L + G Sbjct: 94 YAERALRAGARGYVMKQEPGEVLVTAIHEV--LKGNI---YLSKPMHAKLLNRVAGGNSE 148 Query: 108 PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIV 167 P + ++F+++ LI + I L+ S +T++ +FNI KL L+ +D++ Sbjct: 149 PEPLIN-SLTPSEFEVLHLIGSGHSSQEIAKLLSRSIKTIETHRFNIRTKLNLKDGADLI 207 Query: 168 TL 169 Sbjct: 208 RY 209 >UniRef50_A1ATT6 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ATT6_PELPD Length = 203 Score = 38.8 bits (89), Expect = 0.069, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 27/58 (46%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITS 173 + + +I+ LI I L IS +T+ + N+M KL L +++V + + Sbjct: 143 LTEREREILGLIAHGCTNRMIAQHLGISIKTVNNHRTNLMGKLNLHSTAELVRYSLLT 200 >UniRef50_Q475M9 Regulatory protein, LuxR:Response regulator receiver n=3 Tax=Cupriavidus RepID=Q475M9_RALEJ Length = 212 Score = 38.8 bits (89), Expect = 0.070, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 39/100 (39%), Gaps = 18/100 (18%) Query: 88 FVSRKESIKNLLEITYG---KHLPHKNSQLCFSHN---------------QFKIMQLILK 129 FV R+ + +++ G +L L + + ++Q + + Sbjct: 106 FVPRQRDLAEMVQAARGVMSGYLVFPTHTLDAARKLRLPSAGKLARLTARELTVLQYLAR 165 Query: 130 NKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTL 169 + I + L IS +T+ K NIM KL + + ++V Sbjct: 166 GHSNKTIGARLLISSKTVSTHKTNIMCKLNVGSVVEMVDY 205 >UniRef50_A5EP63 Sensor protein n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EP63_BRASB Length = 596 Score = 38.8 bits (89), Expect = 0.071, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 6/119 (5%) Query: 54 DEEAIKFLEKLDAERI-IVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNS 112 + + + A + ++ P H S+L V+R + + + T G+ + Sbjct: 479 HGDVATTVAAMKAGAVDVIEKPIHSSELLDG-----VARVMRLVRMSDSTAGRSDGSADR 533 Query: 113 QLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGI 171 CF+ Q ++MQ +L NI L IS++T++ + +IM K +R + + L I Sbjct: 534 IPCFTRRQQEVMQRVLAGHPSKNIAVDLGISRRTVESHRASIMKKAGVRSLPALARLAI 592 >UniRef50_B0UG66 Two component transcriptional regulator, LuxR family n=2 Tax=Methylobacterium sp. 4-46 RepID=B0UG66_METS4 Length = 244 Score = 38.8 bits (89), Expect = 0.072, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 48/115 (41%), Gaps = 5/115 (4%) Query: 51 HILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 + L F+ K+ + ++ A L + +V R + + ++ + Sbjct: 89 NCLSAGFHGFIYKMQPDSELIRA--ITDLLSGRI---YVPRWLADGDDVKPNTPASIALP 143 Query: 111 NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSD 165 + +L + Q +I+ L+ + + I ++LNI+ T KI ++ L R ++ Sbjct: 144 SDRLKLTPRQHEILPLLAQGMSNKEIANSLNIAAGTAKIHTAALLRALGARNRTE 198 >UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteroidetes RepID=A5FAZ3_FLAJ1 Length = 219 Score = 38.8 bits (89), Expect = 0.072, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 33/54 (61%) Query: 113 QLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDI 166 ++ + + +I+ L+L K I L IS++T ++ +FN+M KLK++ + ++ Sbjct: 156 EMMITKREKEILTLLLSGKGNKEIAEALEISKRTAEVHRFNLMKKLKVKNLMEL 209 >UniRef50_B5JQZ3 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQZ3_9BACT Length = 222 Score = 38.8 bits (89), Expect = 0.073, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 27/53 (50%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVT 168 S+ + +++Q + + + I L +S +T++ + N+M KL R ++ Sbjct: 147 LSNREREVLQAVAEGFSTKQIAEMLEVSVKTIEAHRANLMKKLDARSAVELTR 199 >UniRef50_UPI0001969032 hypothetical protein BACCELL_01743 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001969032 Length = 215 Score = 38.8 bits (89), Expect = 0.077, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 20/138 (14%) Query: 56 EAIKFLEKLDAERIIVLAPYH----ISKLKAKAPIYFV------SRKESIKNLLEITYGK 105 E I+ + L + I++ H I + KA + V ++ K Sbjct: 73 ELIEQIRLLYPDMRIIIETMHSEVWIVRRMVKADVDAVILKQSDPENLQEAIYSVLSGRK 132 Query: 106 H-LPH---------KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIM 155 + PH S + ++++ I + + I + L IS T++ + IM Sbjct: 133 YFCPHFRKCLRKLPPEMPQVLSKREQEVLKCISEGLKSNEIATKLYISVNTVEFHRKQIM 192 Query: 156 YKLKLRRMSDIVTLGITS 173 KL+ + SD++ I S Sbjct: 193 LKLEAKNASDMLIKAIKS 210 >UniRef50_D0FXM2 LuxR family transcriptional regulator n=3 Tax=Erwinia RepID=D0FXM2_ERWPY Length = 207 Score = 38.8 bits (89), Expect = 0.077, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 42/90 (46%), Gaps = 12/90 (13%) Query: 89 VSRKESIKNLLEITYGKHLPHKN------------SQLCFSHNQFKIMQLILKNKNESNI 136 + R +S++N+L + + N S + + +I++ + + + + Sbjct: 102 IYRNQSVENILAVVNDQMEQLDNFRTRLTPSGVNRSSNNLTRRETEILRYLARGISNGGV 161 Query: 137 TSTLNISQQTLKIQKFNIMYKLKLRRMSDI 166 LNIS++T+ K NIM KL + R +++ Sbjct: 162 ARFLNISEKTVSAHKRNIMSKLNMVRPAEL 191 >UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ84_DESAH Length = 218 Score = 38.8 bits (89), Expect = 0.077, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 80/204 (39%), Gaps = 34/204 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKV-GNKPFKVIIDTYHNHILDE 55 I L+ L Q + + +K+ N L ++ + P VI+D + Sbjct: 8 ILLVDDHDILRQSLKKALEEKPNVKVLQGACNGLDAVRLTEKHCPNIVIMDINMPDLNGI 67 Query: 56 EAIKFLEKLDAE-RIIVLA----PYHISKLKAKAPIYFVSRKESIKNL----LEITYGKH 106 EA K + + + +II L+ +++ + F+ + S+++L L + GK Sbjct: 68 EAAKQIISKNPDIKIIALSMLCDEFNVKSMIQAGAKGFLLKTSSLEDLHTAILMVASGKS 127 Query: 107 LPHKNS-QLC------------------FSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 + + + + ++QLI + I+ LNIS++T+ Sbjct: 128 YLCPEALNIMMEDIQTPGDTKLLCPLQRLTLRERGVIQLIAEGYTSQEISEKLNISKRTV 187 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGI 171 + + N M KLK+ ++ + + Sbjct: 188 DVHRTNTMNKLKIHTIAGLTRFAV 211 >UniRef50_B6J0B9 Response regulator n=18 Tax=Coxiella burnetii RepID=B6J0B9_COXB2 Length = 240 Score = 38.8 bits (89), Expect = 0.079, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 31/56 (55%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGI 171 S+ Q +++ L+ K N +I L+I+ +T+ ++ + KL ++ +++ L + Sbjct: 171 LSNRQMEVLLLLAKGMNAESIAKQLHITAKTVNSHRYRMFEKLGVKNDVELIKLAV 226 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 38.8 bits (89), Expect = 0.080, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 31/56 (55%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGI 171 + + +I++++ + K+ I + +S +T++ KFN+M KL + + +V I Sbjct: 156 LTKREREILKMLAEGKSVKEIAAFFELSVKTVEAHKFNLMRKLDIHNKAQLVQYAI 211 >UniRef50_C0YN07 LuxR family transcriptional regulator protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YN07_9FLAO Length = 265 Score = 38.8 bits (89), Expect = 0.085, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Query: 97 NLLEITYGKHLPHKNS-QLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIM 155 + ++ + +H S + F+ + +I+ I K + I+ LNIS++T++ + NI+ Sbjct: 185 DFHQMQWTEHDRFPESVPVIFTRREVEIINCIAKGYSTGKISDLLNISEETVRTHRKNIL 244 Query: 156 YKLKLRRMSDIVT 168 K + S+++ Sbjct: 245 RKSDCKNSSELIK 257 >UniRef50_C1ZGK9 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGK9_PLALI Length = 217 Score = 38.8 bits (89), Expect = 0.086, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 28/55 (50%) Query: 115 CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTL 169 S + ++++LI I + L+IS +T++ K M KL LR +++V Sbjct: 152 SLSERETEVLKLIAAGHMAKEIAAKLDISLKTVETYKSRGMQKLSLRGRTELVRF 206 >UniRef50_Q3JAP2 Two component transcriptional regulator, LuxR family n=2 Tax=Nitrosococcus oceani RepID=Q3JAP2_NITOC Length = 232 Score = 38.4 bits (88), Expect = 0.089, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 30/55 (54%) Query: 115 CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTL 169 + + +I+ L+L+ I L IS +T+++ + N+M KL + + +++ L Sbjct: 143 SLTLREKQILDLVLRGTLNKVIAYELEISMKTVEVHRHNMMEKLSAKNLVELINL 197 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 38.4 bits (88), Expect = 0.092, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 30/57 (52%) Query: 115 CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGI 171 + + ++++L+ + + + L+IS +T++ + N+M KL + D+V I Sbjct: 149 SLTQREREVLRLLAQGDSNREVAGQLSISAKTVETHRANVMRKLGASSIVDLVHYAI 205 >UniRef50_Q5E1C3 Two component response regulator n=17 Tax=Gammaproteobacteria RepID=Q5E1C3_VIBF1 Length = 205 Score = 38.4 bits (88), Expect = 0.095, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 61/138 (44%), Gaps = 14/138 (10%) Query: 44 IIDTYHNHILDEEAIKFLEKLD-AERIIVLA-----PYHISKLKAKAPIYFVSRKESIKN 97 I+D+ + ++ + L++ + +I L P + LKA A +F + + Sbjct: 59 ILDSRMPELRGQDVHELLKQQNSPLSVIFLTGHGDIPMAVDALKAGAADFFQKPVDGEEL 118 Query: 98 LLEITYGKHLPHKN--------SQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 + I G K S L + + ++++LI++ + + +S +T+++ Sbjct: 119 FIAIKNGLAASEKRYKSQDAHRSYLSLTAREQEVLKLIVQGMKNQQMADAMCVSLRTIEV 178 Query: 150 QKFNIMYKLKLRRMSDIV 167 + N+M KL + + D++ Sbjct: 179 HRSNLMKKLGVNSVVDLI 196 >UniRef50_UPI00016AE77A regulatory protein, LuxR:Response regulator receiver n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AE77A Length = 194 Score = 38.4 bits (88), Expect = 0.095, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%) Query: 108 PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIV 167 P N L + + ++++L + + I + L S+QT+ QK N M K+ ++R D++ Sbjct: 118 PTSNRGLALTPRELEVVRLFVSGLTINEIAARLRRSKQTISSQKNNAMRKMSIKRNIDLI 177 Query: 168 TLGITSYF 175 + + Sbjct: 178 KYAVDTKL 185 >UniRef50_A6GNE3 Two component transcriptional regulator, LuxR family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GNE3_9BURK Length = 228 Score = 38.4 bits (88), Expect = 0.100, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 27/58 (46%) Query: 116 FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITS 173 + + +++ LI + + I L +S +T+ + ++ KL L +V I++ Sbjct: 167 LTRRERQVLTLIAQGRPRREIAELLKVSPRTIDAYRARLLQKLNLDSSVQLVKYAISA 224 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q83J60 HTH-type transcriptional regulator dctR n=59 Tax... 187 1e-46 UniRef50_B7LQG5 Putative HTH-type transcriptional regulator dctR... 185 7e-46 UniRef50_P63206 Transcriptional regulator gadE n=61 Tax=Enteroba... 177 2e-43 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 150 2e-35 UniRef50_B8CMA1 Response regulator containing a CheY-like receiv... 131 1e-29 UniRef50_Q2SQ58 Response regulator containing a CheY-like receiv... 130 1e-29 UniRef50_B7GMR0 DNA-binding response regulator, NarL family (REC... 126 3e-28 UniRef50_B2KBW2 Two component transcriptional regulator, LuxR fa... 111 1e-23 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 108 9e-23 UniRef50_C7PDL7 Two component transcriptional regulator, LuxR fa... 97 3e-19 UniRef50_B5JLG5 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi... 95 1e-18 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 93 3e-18 UniRef50_C7PCU2 Two component transcriptional regulator, LuxR fa... 79 6e-14 Sequences not found previously or not previously below threshold: UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 130 2e-29 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 105 5e-22 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 103 3e-21 UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR fa... 103 3e-21 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 102 6e-21 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 100 2e-20 UniRef50_Q04VJ6 Receiver component of a two-component response r... 100 4e-20 UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opit... 99 7e-20 UniRef50_B4CVL8 Two component transcriptional regulator, LuxR fa... 98 9e-20 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 97 2e-19 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 97 3e-19 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 97 3e-19 UniRef50_Q021D5 Two component transcriptional regulator, LuxR fa... 96 4e-19 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 96 4e-19 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 96 5e-19 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 96 6e-19 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 95 8e-19 UniRef50_Q023R1 Two component transcriptional regulator, LuxR fa... 95 8e-19 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 95 1e-18 UniRef50_B6WQV4 Putative uncharacterized protein n=1 Tax=Desulfo... 94 1e-18 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 94 1e-18 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 94 1e-18 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 94 1e-18 UniRef50_UPI00017452CB response regulator with a HTH DNA-binding... 93 3e-18 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 93 3e-18 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 93 3e-18 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 93 4e-18 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 92 7e-18 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 92 8e-18 UniRef50_C1TL94 Response regulator containing a CheY-like receiv... 92 8e-18 UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opit... 92 8e-18 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 92 8e-18 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 92 9e-18 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 92 9e-18 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 92 9e-18 UniRef50_B1ZU68 Two component transcriptional regulator, LuxR fa... 91 1e-17 UniRef50_A1VIF2 Two component transcriptional regulator, LuxR fa... 91 1e-17 UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=... 91 1e-17 UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms Re... 91 1e-17 UniRef50_B3RA82 Response regulator protein; Response regulator r... 91 1e-17 UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax... 91 1e-17 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 91 1e-17 UniRef50_Q0A525 Two component transcriptional regulator, LuxR fa... 91 1e-17 UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=... 91 2e-17 UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa... 91 2e-17 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 91 2e-17 UniRef50_C6Y2F0 Response regulator receiver n=1 Tax=Pedobacter h... 91 2e-17 UniRef50_C5D3Y5 Two component transcriptional regulator, LuxR fa... 90 2e-17 UniRef50_C1F244 Two-component system response regulator n=1 Tax=... 90 2e-17 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 90 2e-17 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 90 2e-17 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 90 3e-17 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 90 3e-17 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 90 3e-17 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 90 4e-17 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 89 4e-17 UniRef50_C4XMF2 NarL family two-component response regulator n=1... 89 5e-17 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 89 6e-17 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 89 7e-17 UniRef50_A1ATT6 Two component transcriptional regulator, LuxR fa... 89 7e-17 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 89 8e-17 UniRef50_B5EEC0 Two component transcriptional regulator, LuxR fa... 89 8e-17 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 88 1e-16 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 88 1e-16 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 88 1e-16 UniRef50_C1A5E6 NarL family two-component response regulator n=1... 88 1e-16 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 88 1e-16 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 88 2e-16 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 88 2e-16 UniRef50_A4XNE1 Two component transcriptional regulator, LuxR fa... 87 2e-16 UniRef50_Q8PM22 Transcriptional regulator n=3 Tax=Xanthomonas Re... 87 2e-16 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 87 2e-16 UniRef50_A3D3Y4 Two component transcriptional regulator, LuxR fa... 87 2e-16 UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa... 87 2e-16 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 87 2e-16 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 87 2e-16 UniRef50_B0SY65 Two component transcriptional regulator, LuxR fa... 87 3e-16 UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Ta... 87 3e-16 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 87 3e-16 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 87 3e-16 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 87 3e-16 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 87 3e-16 UniRef50_A9VYF8 Response regulator receiver n=5 Tax=Methylobacte... 86 4e-16 UniRef50_UPI0001AF0F26 two-component system response regulator n... 86 4e-16 UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T... 86 4e-16 UniRef50_B4D2X8 Two component transcriptional regulator, LuxR fa... 86 4e-16 UniRef50_A4CN07 Response regulator containing a CheY-like receiv... 86 4e-16 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 86 5e-16 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 86 5e-16 UniRef50_B1ZN14 Two component transcriptional regulator, LuxR fa... 86 5e-16 UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92... 86 6e-16 UniRef50_Q842F8 Response regulator, two-component system n=8 Tax... 85 6e-16 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 85 6e-16 UniRef50_C6E2Z2 Two component transcriptional regulator, LuxR fa... 85 7e-16 UniRef50_C4XSZ8 NarL family two-component response regulator n=2... 85 7e-16 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 85 7e-16 UniRef50_B0TSG4 Two component transcriptional regulator, LuxR fa... 85 8e-16 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 85 8e-16 UniRef50_Q2W0D2 Response regulator containing a CheY-like receiv... 85 8e-16 UniRef50_B6JD38 Two component transcriptional regulator, LuxR fa... 85 8e-16 UniRef50_Q024A4 Two component transcriptional regulator, LuxR fa... 85 9e-16 UniRef50_C7PEC4 Two component transcriptional regulator, LuxR fa... 85 9e-16 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 85 9e-16 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 85 9e-16 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 85 1e-15 UniRef50_Q2RU94 Sensor protein n=1 Tax=Rhodospirillum rubrum ATC... 85 1e-15 UniRef50_A8H3B9 Two component transcriptional regulator, LuxR fa... 85 1e-15 UniRef50_B4D4R4 Two component transcriptional regulator, LuxR fa... 85 1e-15 UniRef50_Q47DK2 Two component transcriptional regulator, LuxR fa... 85 1e-15 UniRef50_B1ZT64 Two component transcriptional regulator, LuxR fa... 85 1e-15 UniRef50_C6X598 Two-component response regulator n=1 Tax=Flavoba... 85 1e-15 UniRef50_Q2W107 Response regulator containing a CheY-like receiv... 85 1e-15 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 84 1e-15 UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding... 84 2e-15 UniRef50_C7I0E4 Two component transcriptional regulator, LuxR fa... 84 2e-15 UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa... 84 2e-15 UniRef50_A8G0P8 Two component transcriptional regulator, LuxR fa... 84 2e-15 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 84 2e-15 UniRef50_C1XWT0 Two component transcriptional regulator, LuxR fa... 84 2e-15 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 84 3e-15 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 84 3e-15 UniRef50_Q39TN7 Two component transcriptional regulator, LuxR fa... 84 3e-15 UniRef50_D2PZN7 Two component transcriptional regulator, LuxR fa... 84 3e-15 UniRef50_C6VTJ6 Two component transcriptional regulator, LuxR fa... 84 3e-15 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 84 3e-15 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 84 3e-15 UniRef50_C6I025 Two component transcriptional regulator, LuxR fa... 83 3e-15 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 83 3e-15 UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR fa... 83 3e-15 UniRef50_B6IU89 Glycerol metabolism activator AgmR n=1 Tax=Rhodo... 83 3e-15 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 83 4e-15 UniRef50_D0L5W2 Response regulator receiver n=36 Tax=Actinomycet... 83 4e-15 UniRef50_D1BGN7 Response regulator containing a CheY-like receiv... 83 4e-15 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 83 4e-15 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 83 4e-15 UniRef50_C7PGM2 Two component transcriptional regulator, LuxR fa... 83 4e-15 UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR fa... 83 5e-15 UniRef50_Q89DY0 Two-component response regulator n=1 Tax=Bradyrh... 83 5e-15 UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc... 83 5e-15 UniRef50_Q0S3P7 Response regulator, two-component system n=11 Ta... 83 5e-15 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 82 5e-15 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 82 6e-15 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 82 6e-15 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 82 6e-15 UniRef50_B4DAD9 Two component transcriptional regulator, LuxR fa... 82 6e-15 UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomyceta... 82 7e-15 UniRef50_C7LQH4 Two component transcriptional regulator, LuxR fa... 82 7e-15 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 82 7e-15 UniRef50_A6BYP5 Response regulator receiver domain protein n=1 T... 82 7e-15 UniRef50_C5T9P3 Two component transcriptional regulator, LuxR fa... 82 8e-15 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 82 8e-15 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 82 8e-15 UniRef50_B9JLI1 Two-component response regulator protein n=1 Tax... 82 8e-15 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 82 8e-15 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 82 8e-15 UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR fa... 82 9e-15 UniRef50_Q1J2K9 Two component transcriptional regulator, LuxR fa... 82 9e-15 UniRef50_UPI0001969032 hypothetical protein BACCELL_01743 n=1 Ta... 82 9e-15 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 82 9e-15 UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1... 82 9e-15 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 82 9e-15 UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR fa... 82 1e-14 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 82 1e-14 UniRef50_C9M9U6 Response regulator GacA n=1 Tax=Jonquetella anth... 82 1e-14 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 82 1e-14 UniRef50_Q0K3Q8 Response regulator, NarL-family n=1 Tax=Ralstoni... 82 1e-14 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 82 1e-14 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 82 1e-14 UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa... 82 1e-14 UniRef50_C6WIC9 Two component transcriptional regulator, LuxR fa... 82 1e-14 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 81 1e-14 UniRef50_Q12FM5 Two component transcriptional regulator, LuxR fa... 81 1e-14 UniRef50_B1ZWL0 Two component transcriptional regulator, LuxR fa... 81 1e-14 UniRef50_A8L345 Two component transcriptional regulator, LuxR fa... 81 1e-14 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 81 1e-14 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 81 1e-14 UniRef50_Q0AL13 Two component transcriptional regulator, LuxR fa... 81 1e-14 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 81 1e-14 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 81 1e-14 UniRef50_A1TUY1 Two component transcriptional regulator, LuxR fa... 81 2e-14 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 81 2e-14 UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa... 81 2e-14 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 81 2e-14 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 81 2e-14 UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC... 81 2e-14 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 81 2e-14 UniRef50_B8GUD1 Two component transcriptional regulator, LuxR fa... 81 2e-14 UniRef50_B6INK4 Glycerol metabolism activator AgmR n=3 Tax=Rhodo... 81 2e-14 UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv... 81 2e-14 UniRef50_C4XNR8 NarL family two-component response regulator n=1... 81 2e-14 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 80 2e-14 UniRef50_Q3JL34 DNA-binding response regulator n=30 Tax=pseudoma... 80 2e-14 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 80 2e-14 UniRef50_B1ZU87 Two component transcriptional regulator, LuxR fa... 80 2e-14 UniRef50_C5C3G8 Two component transcriptional regulator, LuxR fa... 80 2e-14 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 80 2e-14 UniRef50_D2Q428 Two component transcriptional regulator, LuxR fa... 80 2e-14 UniRef50_B8ET67 Two component transcriptional regulator, LuxR fa... 80 3e-14 UniRef50_A7HS72 Two component transcriptional regulator, LuxR fa... 80 3e-14 UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR fa... 80 3e-14 UniRef50_C1A730 NarL family two-component response regulator n=1... 80 3e-14 UniRef50_A9DM99 Transcriptional regulator, LuxR family protein n... 80 3e-14 UniRef50_C4ZM15 Two component transcriptional regulator, LuxR fa... 80 3e-14 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 80 4e-14 UniRef50_C5T9S0 Two component transcriptional regulator, LuxR fa... 80 4e-14 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 80 4e-14 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 80 4e-14 UniRef50_C4KBL1 Two component transcriptional regulator, LuxR fa... 80 4e-14 UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto... 80 4e-14 UniRef50_C9RXQ8 Two component transcriptional regulator, LuxR fa... 80 4e-14 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 80 4e-14 UniRef50_C1XKQ4 Two component transcriptional regulator, LuxR fa... 79 4e-14 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 79 5e-14 UniRef50_A5FNZ8 Two component transcriptional regulator, LuxR fa... 79 5e-14 UniRef50_C5T0X1 Two component transcriptional regulator, LuxR fa... 79 5e-14 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 79 5e-14 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 79 5e-14 UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methyli... 79 5e-14 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 79 5e-14 UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR fa... 79 5e-14 UniRef50_C7PMV2 Two component transcriptional regulator, LuxR fa... 79 6e-14 UniRef50_C7PJC5 Two component transcriptional regulator, LuxR fa... 79 6e-14 UniRef50_Q2YB36 Two component transcriptional regulator, LuxR fa... 79 6e-14 UniRef50_UPI0001744C34 response regulator with a HTH DNA-binding... 79 6e-14 UniRef50_Q39C19 Two component transcriptional regulator, LuxR fa... 79 6e-14 UniRef50_Q1IJ83 Two component transcriptional regulator, LuxR fa... 79 7e-14 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 79 7e-14 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 79 7e-14 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 79 7e-14 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 79 7e-14 UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n... 79 7e-14 UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR fa... 79 8e-14 UniRef50_A5LFV2 FimR protein n=3 Tax=Porphyromonas gingivalis Re... 79 8e-14 UniRef50_Q24Z68 Putative uncharacterized protein n=1 Tax=Desulfi... 79 8e-14 UniRef50_B4CYJ9 Two component transcriptional regulator, LuxR fa... 79 8e-14 UniRef50_A5FAW2 Two component transcriptional regulator, LuxR fa... 79 8e-14 UniRef50_B3PDX5 Response regulator n=1 Tax=Cellvibrio japonicus ... 79 9e-14 >UniRef50_Q83J60 HTH-type transcriptional regulator dctR n=59 Tax=Enterobacteriaceae RepID=DCTR_SHIFL Length = 176 Score = 187 bits (476), Expect = 1e-46, Method: Composition-based stats. Identities = 42/175 (24%), Positives = 81/175 (46%) Query: 1 MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKF 60 M ++T+D+ + ++ I + EI + ++ VIIDT N++ + Sbjct: 1 MFLIITRDTMFFTAMKNILSKGNVVHIQNEEEIDVMLHQNAFVIIDTLMNNVFHSNFLTQ 60 Query: 61 LEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQ 120 +E+L +IV +P++I + K P+ FV R +I + + + G + + + S Q Sbjct: 61 IERLKPVHVIVFSPFNIKRCLGKVPVTFVPRTITIIDFVALINGSYCSVPEANVSLSRKQ 120 Query: 121 FKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 +++ I +I L IS +T K NIM L L+R++++V Y Sbjct: 121 HQVLSCIANQMTTEDILEKLKISLKTFYCHKHNIMMILNLKRINELVRHQHIDYL 175 >UniRef50_B7LQG5 Putative HTH-type transcriptional regulator dctR, Probable repressor of dctA dicarboxylate transporter gene n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LQG5_ESCF3 Length = 187 Score = 185 bits (469), Expect = 7e-46, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 84/175 (48%) Query: 1 MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKF 60 M ++TKD+ L L + +++ + +I V ++ +IIDT N++ + Sbjct: 12 MFLVITKDTVLFNAITFLLNKSQVVHVQDEDDIDLVLHQHCHIIIDTLMNNVFHSAMAEK 71 Query: 61 LEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQ 120 +++L E++IV +P+ I + P+ FV R S+ + + + P + + S Q Sbjct: 72 IKQLRPEQVIVFSPFIIKRCLGDIPVTFVLRNISLIDFMVLVNRGLCPAPEADIMLSRKQ 131 Query: 121 FKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 +++ I + +I + IS +T K ++M L LRR+++++ SY Sbjct: 132 HQVLSYIAQQMQTEDILQKMQISLKTFYCHKHSVMMILNLRRITELIKYPHVSYL 186 >UniRef50_P63206 Transcriptional regulator gadE n=61 Tax=Enterobacteriaceae RepID=GADE_ECO57 Length = 175 Score = 177 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 175/175 (100%), Positives = 175/175 (100%) Query: 1 MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKF 60 MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKF Sbjct: 1 MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKF 60 Query: 61 LEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQ 120 LEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQ Sbjct: 61 LEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQ 120 Query: 121 FKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 FKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF Sbjct: 121 FKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 150 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 75/204 (36%), Gaps = 32/204 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKV-IIDTYHNHILDE 55 I L + + I+I N I + ++P + +D + Sbjct: 5 IVLADDHQMFRHALRAMLEKEPGIRIVGEASNGDELIDLISHQPVDIACVDIGMPGMNGI 64 Query: 56 EAIKFLEKLDA-ERIIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITYG------ 104 EA + L + R+I L+ + + L +V++ E+ + LL + Sbjct: 65 EATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQQSKT 124 Query: 105 KHLPHKNSQLC---------------FSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 P + + + + +++QLI + + I L+++ T+++ Sbjct: 125 YLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLAPSTVEV 184 Query: 150 QKFNIMYKLKLRRMSDIVTLGITS 173 + NIM KL L ++++ I S Sbjct: 185 HRRNIMRKLDLHSVAELTKYAIRS 208 >UniRef50_B8CMA1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Gammaproteobacteria RepID=B8CMA1_SHEPW Length = 196 Score = 131 bits (329), Expect = 1e-29, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 81/189 (42%), Gaps = 18/189 (9%) Query: 2 IFLMTKDSFLLQGFWQLK-DNHEMIKI--NSLSEIKKV-GNKPFKVIIDTYHNHILDEEA 57 I + + QG L H+++ I + ++ V + P VI D + A Sbjct: 4 IIIADDHLIVAQGIAGLLKAEHQVLAIAKDGEELVELVKQHDPELVITDISMPGMTGIAA 63 Query: 58 IKFLEKLDAERIIVLAPYHISKLKAKAPIY-----FVSRKESIKNLLEITYG-------- 104 + L+++ + ++ H + A+ I +V + E+ +L++ Sbjct: 64 VAALKRIKKDLRVICLTMHDEQEYAEGAIAAGALGYVLKHEATDDLVDAVNSVLAGKQYL 123 Query: 105 -KHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRM 163 K + ++S S Q +++L+ + K+ + L IS +T++ K++IM ++ + Sbjct: 124 SKSVQVEDSAPTLSARQLSVLRLLAQGKSAKQVADALFISPRTVEFHKYSIMKLIEAKSS 183 Query: 164 SDIVTLGIT 172 ++++ ++ Sbjct: 184 AELIQYALS 192 >UniRef50_Q2SQ58 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQ58_HAHCH Length = 207 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 72/199 (36%), Gaps = 33/199 (16%) Query: 3 FLMTKDSFLLQG-----FWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEA 57 F++T D + + L + E+++ S SE+ ++ N V + + D + Sbjct: 5 FVITDDHGIFRSGLKLIISGLYPDAEILEAASGSEVFRLLNANTDVDLVLLDLSMPDSQG 64 Query: 58 IKFLEKLDAERIIVLAPYHISKL---------------KAKAPIYFVSRKESIKNLLEIT 102 ++ L KL E V+ P+ + P + + L ++ Sbjct: 65 LELLRKLKQE--FVMTPFAVISASEEAALIQGAIQLGALGYVPKSSSNAVIASAIQLMLS 122 Query: 103 YGKHLPH-----------KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 G ++PH +C + Q +++ L+ + + I + L+I+ T+K Sbjct: 123 GGVYIPHELLRTGHDEGMPTGDICLTPRQHEVLGLLAEGMSNKQIGTKLSIAPGTIKAHI 182 Query: 152 FNIMYKLKLRRMSDIVTLG 170 I +L + V Sbjct: 183 AAIFRELNAANRTQAVHRA 201 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 69/204 (33%), Gaps = 32/204 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFK-VIIDTYHNHILDE 55 I L L +++ + + +P V +D + Sbjct: 5 ILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPGMDGI 64 Query: 56 EAIKFLEKLDAE-RIIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITY------G 104 EA + L R+I L+ + + L A ++++ E+ LL Sbjct: 65 EATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCEGRS 124 Query: 105 KHLPHKNSQLC---------------FSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 P + + + + +++QLI + I L+I+ T+++ Sbjct: 125 YLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAASTVEV 184 Query: 150 QKFNIMYKLKLRRMSDIVTLGITS 173 + N+M KL L ++++ I S Sbjct: 185 HRRNLMRKLDLHNVAELTRYAIHS 208 >UniRef50_B7GMR0 DNA-binding response regulator, NarL family (REC-HTH domains) n=4 Tax=Bacillaceae RepID=B7GMR0_ANOFW Length = 206 Score = 126 bits (317), Expect = 3e-28, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 82/190 (43%), Gaps = 21/190 (11%) Query: 2 IFLMTKDSFLLQGFWQLKDNHE-------MIKINSLSEIKKVGNKPFKVIIDTYHNHILD 54 + L+ + +++G +L E ++ ++ L E + N +++D Sbjct: 11 VLLVDDHALMIEGVKELLGREEDMHVVGTVLHLSQLQESIETLNPHV-IVMDIRLKDGNG 69 Query: 55 EEAIKFLEKLDAE-RIIVLAPYH----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPH 109 E K ++ L + ++++L+ Y+ I K FV ++ESI L G + Sbjct: 70 LEWTKKMKMLYPDCKVVILSGYNYSEYIRAAKHAGASAFVVKEESILQLANAIRGAYEGF 129 Query: 110 --------KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLR 161 + + + + I++LI ++K NI+ +LNIS++T++ I+ KL++ Sbjct: 130 AFFPNDVDEEENISLTKMELVILKLIAQDKTNENISHSLNISRRTVEHHVSTIIKKLRVD 189 Query: 162 RMSDIVTLGI 171 V I Sbjct: 190 SRVGAVVKAI 199 >UniRef50_B2KBW2 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBW2_ELUMP Length = 215 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 77/207 (37%), Gaps = 35/207 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDN-----HEMIKINSLSEI--KKVGNKPFKV-IIDTYHNHIL 53 I L + + G + + + ++ + E+ V NK V ++D + Sbjct: 4 ILLADDHALVRDGIKSILERKGKNISVVAEMGNGKEMLDYAVKNKNIDVYVVDIAMPILN 63 Query: 54 DEEAIKFLEKLDAE-RIIVLAPYHIS----KLKAKAPIYFVSRKESIKNLLEITY----- 103 A++ L K++ + ++IVL+ Y K FV + S ++E Sbjct: 64 GIAAVQKLLKINPDAKVIVLSMYDDRASVEKAFKAGARGFVVKVSSADEIIEAIKEVSAG 123 Query: 104 -----------------GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 GK P K + + +I+QLI + + I +S T Sbjct: 124 RFYLCSKVSKFVVQGFLGKASPSKKDPSGLTPKEKQILQLIAEGFSSKEIAKEFGLSLNT 183 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGITS 173 + + + NIM KL + + +++V I Sbjct: 184 VHVHRNNIMRKLDIHKQAELVRYAIKE 210 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 108 bits (270), Expect = 9e-23, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 75/206 (36%), Gaps = 34/206 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI----NSLSEIKKVGNK--PFKVIIDTYHNHILDE 55 + L+ + +G + I++ + E + ++ P V++D + Sbjct: 15 VLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMPEMNGI 74 Query: 56 EAIKFLEKLDAE-RIIVLAPYHISKL----KAKAPIYFVSRKESIKNLLEITY------- 103 EAI+ + + R +VL+ ++ + +++ L+ + Sbjct: 75 EAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHTVASGEP 134 Query: 104 ----------------GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 G +S + S + +++QLI + I T +S +T+ Sbjct: 135 YLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGVSIKTV 194 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGITS 173 +Q+ ++M KL L ++D+ + Sbjct: 195 AVQRMSVMKKLNLFNVADLTKYAVRE 220 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 26/210 (12%), Positives = 74/210 (35%), Gaps = 38/210 (18%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL--------SEIKKVGNKPFKV---IIDTYHN 50 I L + + +G + D + + ++++ P +V ++D Sbjct: 30 ILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDVAMP 89 Query: 51 HILDEEAIKFLEKLDAERIIVLAPYHISK-----LKAKAPIYFVSRKESIKNLLEITYGK 105 + +A + L ++ I++ H ++ +V + + ++L++ Sbjct: 90 RMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQACRAA 149 Query: 106 HLPHK----------------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNIS 143 + + + +I++L+ + + I TL IS Sbjct: 150 VRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIADTLFIS 209 Query: 144 QQTLKIQKFNIMYKLKLRRMSDIVTLGITS 173 +T++ + NI+ KL ++ ++ I + Sbjct: 210 VKTVERHRANILAKLGMKDRLELTRYAIRT 239 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 103 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 28/207 (13%), Positives = 81/207 (39%), Gaps = 36/207 (17%) Query: 3 FLMTKDSFLLQGFWQLKDNHEMI----KINSLSEIKKVGNK--PFKVIIDTYHNHILDEE 56 + + +G L ++H + ++ E ++ + P V++D + E Sbjct: 1 MVADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLAQELRPDVVVLDVTMPELNGLE 60 Query: 57 AIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEIT-----YGKH 106 A + + + I+L H S + +V ++++ ++L++ + + Sbjct: 61 ATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKHAPY 120 Query: 107 LPHKNSQ--------------------LCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 +P + ++ + + ++++L+ + + + L+IS +T Sbjct: 121 VPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSISAKT 180 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGITS 173 ++ + N+M KL + D+V I + Sbjct: 181 VETHRANVMRKLGASSIVDLVHYAIRN 207 >UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H4_DESAH Length = 217 Score = 103 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 77/205 (37%), Gaps = 34/205 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFK-VIIDTYHNHILDE 55 + + + L +G Q+ + E + + + + + + +P VI+D + Sbjct: 6 VVIADDHAMLRRGICQVIETQEGVSVVGEVGDGIELLNLLSTQPADLVILDISMPKMSGI 65 Query: 56 EAIKFLEKLDAERIIVLAPYHISKLK-----AKAPIYFVSRKES-------------IKN 97 EA K + I+ H + ++ ++++ K Sbjct: 66 EAAKKIRATYPGIKILFLSMHKRNEYLYHAFSAGANGYLLKEDTDTEILTAMDTILEGKA 125 Query: 98 LLEITYGKHLPHKNSQL----------CFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 L + K +P + + S + +++ L+ + K+ I L IS +T+ Sbjct: 126 FLSSIFTKDMPDILTDMVKNGSSFPGGTLSPREEEVLTLLAEGKSNKKIADILCISTRTV 185 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGIT 172 + + +IM +L LR ++D++ I Sbjct: 186 EHHRASIMKRLDLRTLADLIKYAIR 210 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 102 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 69/203 (33%), Gaps = 33/203 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNH----EMIKINSLSEIKK-VGNKPFKVIIDTYHNHILDEE 56 I + + + +G L + + N + V KP VI+D ++ Sbjct: 5 ILIADDHAIVREGLRVLLERKGLEVPWMAENGRQAVCLAVKFKPDIVIMDITMPNMNGSI 64 Query: 57 AIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEIT----YGKHL 107 A + + + ++ H I ++ I +V + + L + GK+ Sbjct: 65 ATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAIQAVGRGKYY 124 Query: 108 PHKNSQLCF-------------------SHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 + S + +++QLI + I L +S +T++ Sbjct: 125 ISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLFVSIKTVE 184 Query: 149 IQKFNIMYKLKLRRMSDIVTLGI 171 + NIM KL + ++ + I Sbjct: 185 AHRRNIMNKLMISSVAGLTRFAI 207 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 100 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 75/206 (36%), Gaps = 34/206 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGN------KPFKVIIDTYHNHILDE 55 + ++ S + +G L + + + + ++ + + P V++D + Sbjct: 4 VMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPGLNGI 63 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPH- 109 +A + L E +++ H +S+ ++ + + L++ Sbjct: 64 DATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVACGEM 123 Query: 110 ------------------KNS----QLCFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 S ++ + + +++QLI + N N LNI+ +T+ Sbjct: 124 YVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNINVKTV 183 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGITS 173 + IM KLK+R ++++ I Sbjct: 184 DTHRQQIMKKLKMRSVAELTKYAIRE 209 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 99.7 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 78/209 (37%), Gaps = 37/209 (17%) Query: 2 IFLMTKDSFLLQGFWQLK-DNHEMIKINSLSE--IKKVGN-KPFKVIIDTYHNHILDEEA 57 IFL+ + L +G + E+ + +E + ++G P VI D + + Sbjct: 8 IFLVDDHAILREGLKMILSGQFEICGESGDAEKALDQIGKLNPDLVITDISMPGLSGIDL 67 Query: 58 IKFLEKLDAERIIVLAPYHI-----SKLKAKAPIYFVSRKESIKNLLEITYGKH------ 106 +K L K ++ H KL +V + ++ +LL H Sbjct: 68 VKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIEAVHKGETYL 127 Query: 107 ----------------------LPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQ 144 K + S + +I++L+ + + +I L IS Sbjct: 128 SPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNESIGKILGISP 187 Query: 145 QTLKIQKFNIMYKLKLRRMSDIVTLGITS 173 T+K+ + NIM KL L +++D+V I + Sbjct: 188 ATVKVHRANIMKKLNLHKVADLVMYAIRA 216 >UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9E4_9BACT Length = 227 Score = 98.6 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 74/195 (37%), Gaps = 23/195 (11%) Query: 2 IFLMTKDSFLLQGFWQLKDNHE----MIKINSLSEIKKV--GNKPFKVIIDTYHNHILDE 55 + ++ +L+G L + K S E ++ + P V+ D + Sbjct: 6 VIIVDDHQLMLEGIASLLRATPDITLVAKAQSAKEAFELVKQHNPDIVVADLSMPGVTGL 65 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPH- 109 + I+ ++ I++ H + + + FV + ++ ++L++I + H Sbjct: 66 DLIQQIKDAGLLTRIIMLTMHRTRLTVHEAFSVGANAFVLKSDAFEDLVDIIHRVHEGEN 125 Query: 110 -----------KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKL 158 S + +++ I + I+ L IS +T++ + IM KL Sbjct: 126 TLTSKGLPPYEPACAATLSPREKDVLEGISAGLSNKEISRRLAISSKTVETHRSRIMQKL 185 Query: 159 KLRRMSDIVTLGITS 173 + + +++V + S Sbjct: 186 NVTKATELVREAMRS 200 >UniRef50_B4CVL8 Two component transcriptional regulator, LuxR family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVL8_9BACT Length = 217 Score = 98.2 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 75/209 (35%), Gaps = 35/209 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKVGN-KPFKVIIDTYHNHILDE 55 + + + +G + + E ++ ++ V +P V++D + Sbjct: 6 VLIADDHQVMRRGVRAVVELLEGWEVCGEASTGREAVEMVEKLQPQIVVMDVTMPELNGL 65 Query: 56 EAIKFLEKLDAERIIVL-----APYHISKLKAKAPIYFVSRK------------------ 92 EA + ++K+ I++ I ++ ++ + Sbjct: 66 EATRQIKKIAPATEILMFTGLETEELIRQVFEAGARSYILKTDGREQLEAALTALAAHKP 125 Query: 93 -----ESIKNLLEITYGKHLPHKNS-QLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 + +GK + + + + +I+QL+ + + + +L IS +T Sbjct: 126 YFTTQVGEILFAKFLHGKPKDEEQTVDGRLTDREREIVQLLAEGASNKEVADSLGISVKT 185 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 ++ + IM KLK + SD+V I ++ Sbjct: 186 VETHRAAIMKKLKFKSFSDLVRYAIRNHI 214 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 97.4 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 24/206 (11%), Positives = 69/206 (33%), Gaps = 35/206 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGN-----KPFKVIIDTYHNH 51 + ++ + G ++ + ++ + +P +++D Sbjct: 15 VMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIILMDLMMPG 74 Query: 52 ILDEEAIKFLEKLDAE-RIIVLAPYH----ISKLKAKAPIYFVSRKESIKNLLEITYGKH 106 + EA K + + +I++L + + + + +V + S + L+ G + Sbjct: 75 MNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELIYALQGAY 134 Query: 107 LPHK--------------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 + + +++ LI + K+ +I L+IS +T Sbjct: 135 RGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEELHISIKT 194 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGIT 172 +K N++ K +L + + Sbjct: 195 VKTHVSNLLMKCELEDRTQLAIYAHR 220 >UniRef50_C7PDL7 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PDL7_CHIPD Length = 210 Score = 97.0 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 74/202 (36%), Gaps = 32/202 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKVII-DTYHNHILDE 55 + ++ +G L + I + N + VI+ D + Sbjct: 4 VLIVDDHHLFAEGVASLFKPEDGIAVVKHTTNGNEIPDILAGSDIDVILLDIDMPILNGI 63 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHL--- 107 ++ L+ ++ +V+ H + K +V + S L++ Sbjct: 64 ACMELLKHKGYDKPVVMLTMHQSMRQVKDALEKGAQGYVLKDASKAELVQAINNASERKN 123 Query: 108 ---PHKNSQL---------------CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 P N Q+ S + +I++ + + N I+S+L IS+ T+K Sbjct: 124 YFHPKINDQVFDYFRGKSVGKSGLQELSEREKEIIKCLAEGMNTKAISSSLYISEHTVKT 183 Query: 150 QKFNIMYKLKLRRMSDIVTLGI 171 + NIM+KL ++ ++++ L I Sbjct: 184 HRRNIMHKLNVKTSAELIRLAI 205 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 96.7 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 28/199 (14%), Positives = 70/199 (35%), Gaps = 28/199 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKV-IIDTYHNHILDE 55 I + + QG L H+ ++I ++ + + V ++D + Sbjct: 4 IIMADDHTIFRQGLAHLLSAHQELEIVGEAGRGDDALQLIRDLNPDVALLDISMPGLNGL 63 Query: 56 EAIKFLEKLDAERIIVLAPYHI-----SKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 + +K + + ++L H K + + +V + + LL+ + Sbjct: 64 DVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNAFSELLDAILAVAAGKR 123 Query: 111 -----------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFN 153 + + S + ++++L+ + I +L IS +T+ + Sbjct: 124 FVSEVVAEKVNELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKTVDTHRTR 183 Query: 154 IMYKLKLRRMSDIVTLGIT 172 +M KL L +D+V + Sbjct: 184 LMRKLNLHTTADVVRYAMR 202 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 96.7 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 24/175 (13%), Positives = 62/175 (35%), Gaps = 31/175 (17%) Query: 29 SLSEIKKVGN-KPFKVIIDTYHNHILDEEAIKFLEKLDAERIIVLAPYH-----ISKLKA 82 ++ KP VI+D + EA + +++ E ++ H + + Sbjct: 17 GEEAVELTKALKPDVVIMDISLPDMSGIEATRLIKEAVPETRVIGLTMHEEEPFVLEFLR 76 Query: 83 KAPIYFVSRKESIKNLLEITY-------------------------GKHLPHKNSQLCFS 117 ++ ++ + +L+ G+ + + Sbjct: 77 AGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYVSRPGRAVGQPEEPCPLT 136 Query: 118 HNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGIT 172 + +I+ LI + + I L IS++T++ + N++ KL + +++V I Sbjct: 137 PREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGIHDRTELVRYAIR 191 >UniRef50_Q021D5 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q021D5_SOLUE Length = 210 Score = 96.3 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 74/196 (37%), Gaps = 25/196 (12%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSE-----IKKVGN-KPFKVIIDTYHNHILDE 55 + L+ S + +GF ++ ++ I + +E ++ G P V++D + Sbjct: 8 VLLVDDHSLVRRGFRRMLEDDPAIVVVGEAEDGHQAVQLAGELHPRVVVMDFAMPSMNGA 67 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGK----- 105 A + + + E I++ H + ++ + ++ Sbjct: 68 VAARHILRTAPETAILILSMHAEASYVRTCLEAGVRGYLLKNALDLEMVAAVKQVAAGKQ 127 Query: 106 ---------HLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMY 156 LP + + + +++QLI+ K+ I + L++S T+ + + NIM Sbjct: 128 VLDRRLGALDLPSGAAPAGLTTRELEVLQLIVHGKSNKEIAAVLSLSANTVAVHRANIMQ 187 Query: 157 KLKLRRMSDIVTLGIT 172 L + +++V I Sbjct: 188 TLGIHNTAELVVYAIR 203 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 96.3 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 79/200 (39%), Gaps = 30/200 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKV-GNKPFKVIIDTYHNHILDE 55 + ++ +L GF + I++ N L ++ V ++P V++D + Sbjct: 11 VVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPIMNGI 70 Query: 56 EAIKFLEKLDAERIIVLAPYHISKLK-----AKAPIYFVSRKESIKNLLEITYGKH---- 106 EA + +++ +++ H ++ + ++ ++ S +++ H Sbjct: 71 EATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVHQGAT 130 Query: 107 ---------------LPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 LP N S + I++++ + + I + LNIS +T++ + Sbjct: 131 YFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNISYRTVETHR 190 Query: 152 FNIMYKLKLRRMSDIVTLGI 171 NI +KL + +++ + Sbjct: 191 QNIKHKLDIHSTAELAQYAL 210 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 95.9 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 68/206 (33%), Gaps = 36/206 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKVGN-KPFKVIIDTYHNHILDE 55 I L + QG L +++ + +P V++D + Sbjct: 6 ILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMAGMSSF 65 Query: 56 EAIKFLEKLDAERIIVLAPYHI-----SKLKAKAPIYFVSRKESIKNLLEITY------G 104 EA + + K E ++ + ++ ++ + L+ Sbjct: 66 EATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREVQRGGS 125 Query: 105 KHLPHKNSQL-------------------CFSHNQFKIMQLILKNKNESNITSTLNISQQ 145 P S+L + + +I++++ + K+ I + +S + Sbjct: 126 YLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFFELSVK 185 Query: 146 TLKIQKFNIMYKLKLRRMSDIVTLGI 171 T++ KFN+M KL + + +V I Sbjct: 186 TVEAHKFNLMRKLDIHNKAQLVQYAI 211 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 95.5 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 73/206 (35%), Gaps = 35/206 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVG-NKPFKVIIDTYHNHILDE 55 I L + + +G L ++H ++ + + G + P V++D + Sbjct: 6 ILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMPGLNGI 65 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHL--- 107 EA + + IV H + K ++ + + +L+ Sbjct: 66 EAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAVSEGKA 125 Query: 108 ---------------------PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 ++S + + +++QL+ + KN + + LN+S T Sbjct: 126 FFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILNLSLYT 185 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGIT 172 ++ + NI+ KL L ++++ I Sbjct: 186 VETHRGNILQKLNLHSGAELILYAIR 211 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 95.1 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 75/203 (36%), Gaps = 31/203 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 I L L +G L + E +++ N + G +P ++D + Sbjct: 5 ILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQMDGI 64 Query: 56 EAIKFLEKLDAERIIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITYG------- 104 EA + + + + R++ L+ Y + + F+ + + L+E Sbjct: 65 EATRRIVEDGSSRVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVMDGEIY 124 Query: 105 --------------KHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ 150 L + + + +I+ L+ + + L++S +T+ Sbjct: 125 LGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIKTVGTH 184 Query: 151 KFNIMYKLKLRRMSDIVTLGITS 173 + +IM KLKL+ ++D+V I + Sbjct: 185 RQHIMNKLKLKNLADLVKYAIRN 207 >UniRef50_Q023R1 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023R1_SOLUE Length = 214 Score = 95.1 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 70/200 (35%), Gaps = 30/200 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNH-EMI--KINSLSEIKKVGN-KPFKVIIDTYHNHILDEEA 57 I L + +L G L + H E+I + N + I+ KP V++D + +A Sbjct: 6 ILLGDDHAMILSGIKGLLEGHYEVIGSEKNGRALIETAVRLKPDLVVLDVSMPILNGIDA 65 Query: 58 IKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITY--------- 103 + ++K ++ H + K +V + + + LL Sbjct: 66 AREIKKALPAAKLIFLTMHTNAIYLRKALHAGASGYVLKSGAAEELLTAIEEVCKGYIYV 125 Query: 104 ------------GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 + + Q I+QL+ + K I +IS +T++ + Sbjct: 126 GPDFGQDVIESIRSTGDSQGGLPALTDRQRHILQLLAEGKQNKEIGEIAHISVRTVEFHR 185 Query: 152 FNIMYKLKLRRMSDIVTLGI 171 +M +L ++++ I Sbjct: 186 SRLMSRLGAHSVAELTRFAI 205 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 94.7 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 22/202 (10%), Positives = 57/202 (28%), Gaps = 32/202 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVG----------NKPFKVIIDTYHNH 51 + L+ + + G + + ++ + +P VI D Sbjct: 21 VLLIDDHALVRDGMRMHLTLQPDLYVVGEADGGEAALAWLERAGARERPDLVITDIGMRG 80 Query: 52 ILDEEAIKFLEKLDAERIIVLAPYHI-----SKLKAKAPIYFVSRKESIKNLLEIT---- 102 + L + E +++ H + +V + L+ Sbjct: 81 MGGIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGARGYVLKDAPADELMAAIEAVL 140 Query: 103 -----------YGKHLPHKNSQL--CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 G + + + I+ I + I + L +S +T++ Sbjct: 141 AGRVFYSARIARGMAEQMPATGPLDALTRRERDILGCIGRGMANKEIATQLGVSVRTVET 200 Query: 150 QKFNIMYKLKLRRMSDIVTLGI 171 + N+ KL + + +V + Sbjct: 201 HRLNLKRKLGIEGRAGLVKYAV 222 >UniRef50_B5JLG5 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLG5_9BACT Length = 225 Score = 94.7 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 74/201 (36%), Gaps = 31/201 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINS------LSEIKKVGNKPFKVIIDTYHNHILDE 55 + ++ + + + + +I + KP VI+D + Sbjct: 17 VVIIEDQTAIREMVSEFISMLPGYEIVGSFGTGEEGLQGCIKLKPEIVILDVGLPELSGT 76 Query: 56 EAIKFLEKLDA-ERIIVLAP----YHISKLKAKAPIYFVSRKESIKNL---LEITYGKHL 107 E ++ L +++V + +I +L + +V + + L+I G Sbjct: 77 EVLRGLTLHVPGVKVLVFSGRASSANIRELLSAGAQGYVDKMDGFDEFKKALDIISGGGT 136 Query: 108 -----------------PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ 150 +S++ S + +I+QL+ ++ + I S LNIS +T+ Sbjct: 137 FIGPKMASVMRSLILNPDAASSEIPLSDREKQILQLVAESFSTKEIASRLNISVRTVDNH 196 Query: 151 KFNIMYKLKLRRMSDIVTLGI 171 + NIM KL L ++ + I Sbjct: 197 RTNIMRKLNLHDVAALTRYAI 217 >UniRef50_B6WQV4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WQV4_9DELT Length = 222 Score = 94.3 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 76/210 (36%), Gaps = 39/210 (18%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 I L+ L++G L H +++ + + P VI+D + Sbjct: 7 ILLVDDHKLLMEGIRSLLAPHSHLRVAGMAPDGKEAVGLAATLSPDLVIMDISMPGMNGV 66 Query: 56 EAIKFLEKLDAERIIVLAPYHISK---------------LKAKAPIYFVSRKESIKN--- 97 EA + + ++ E I++ H + K+ P + ++++ Sbjct: 67 EASRAILQIRPETRILIYTGHEDQRHLLELIQLGIMGHVCKSDPPSVLLQAIDAVRQGEV 126 Query: 98 -------------LLEITYGKHLPHKNSQL--CFSHNQFKIMQLILKNKNESNITSTLNI 142 L+ + P + S + +I +L+ + I LNI Sbjct: 127 FLSCADPGGCMAALMRQNRQRLSPAEGGPDIGMLSPREKEIFRLLADGYSVRQIGDALNI 186 Query: 143 SQQTLKIQKFNIMYKLKLRRMSDIVTLGIT 172 S +T++ K++++ KL+ ++++ + I Sbjct: 187 SPKTVETHKYSVLTKLRASSINELTKMAIR 216 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 94.3 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 73/207 (35%), Gaps = 36/207 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSE-----IKKVGN-KPFKVIIDTYHNHILDE 55 + + + + +G L + I++ +E IK V P V++D + Sbjct: 6 VLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMPELNGM 65 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPH- 109 +A + L+K + I++ H I + ++ ++ + +L++ + H Sbjct: 66 DATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAAHAGDC 125 Query: 110 ------------------------KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQ 145 S + +++QLI + I L IS + Sbjct: 126 FLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHLYISPK 185 Query: 146 TLKIQKFNIMYKLKLRRMSDIVTLGIT 172 T++ + +I KL L +++ I Sbjct: 186 TVEAHRNHIQKKLGLNGTAELTKYAIR 212 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 94.3 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 72/207 (34%), Gaps = 35/207 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNK------PFKVIIDTYHNHILDE 55 I L + +G L + +I + + + + P VI+D + Sbjct: 9 ILLADDHDIVRRGLRTLLELRSDWEICAEASDGRAAVQFAEDLAPDIVILDLSMPELNGL 68 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPH- 109 EA + + +++ H + + A ++ + ++ ++L Sbjct: 69 EAARRIAAHCPRSRMLMLTMHETEQFVREALAAGVRGYILKTDAGRDLANAVDALIRGET 128 Query: 110 -----------------------KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 SQ + + +I+QL+ + + ++ LNIS +T Sbjct: 129 FFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGKALNISVKT 188 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGITS 173 + + IM KL + ++D+V I + Sbjct: 189 AETHRARIMAKLGIDSVADLVRYAIRN 215 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 94.3 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 67/202 (33%), Gaps = 32/202 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEI--KKVGNK----PFKVIIDTYHNHILDE 55 + L+ + +G +L + +++ +E + + P +++D + Sbjct: 17 LLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVSMPGMNGI 76 Query: 56 EAIKFLEKLDA-ERIIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 EA + ++ I+VL Y L ++ + S LL Sbjct: 77 EATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAVAAGES 136 Query: 111 NSQLC---------------------FSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 S + +++++ + I L+IS +T+++ Sbjct: 137 ALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISPRTVQV 196 Query: 150 QKFNIMYKLKLRRMSDIVTLGI 171 NI KL + ++ V GI Sbjct: 197 HLANIFSKLGVGSRTEAVLYGI 218 >UniRef50_UPI00017452CB response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017452CB Length = 235 Score = 93.2 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 75/205 (36%), Gaps = 34/205 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMI------KINSLSEIKKVGNKPFKVIIDTYHNHILDE 55 I + + L G +L ++ + + + KP + +D Sbjct: 21 IAFVDDHTMLRDGLQKLVESQPDLCCYWTASNTQDALQQLEQGKPDMLAVDISLPGRNGL 80 Query: 56 EAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITY-----GK 105 E IK L + I++ H ++ +V + LL+ G+ Sbjct: 81 ELIKDALALHPDLPILVISMHDESFYAQRVLKAGARGYVMKDAESTTLLQAIRNVLEGGR 140 Query: 106 HL-PHKNSQLC-----------------FSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 ++ P ++Q+ S +F++ QLI + K+ I LNIS +T+ Sbjct: 141 YVSPAMSAQIMEAFSGRGAARPVDGVQRLSDREFEVFQLISEGKSTQQIGDALNISVKTV 200 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGIT 172 ++ + +I KLKL + ++ + Sbjct: 201 EVHRAHIREKLKLEDGASVLRYAVR 225 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 93.2 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 70/203 (34%), Gaps = 36/203 (17%) Query: 3 FLMTKDSFLLQGFWQLKDNHEMIKINSLS------EIKKVGNKPFKVIIDTYHNHILDEE 56 + L G + + I + + + ++ +++D E Sbjct: 5 LIADDHDILRIGLKHILSDTGDIVVTAEASNGIEALVELRKGTFDALVLDLTMPGRNGIE 64 Query: 57 AIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIY-----------------------F 88 IK ++ + I++ H + F Sbjct: 65 LIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGASGYLCKDSAETLLADAIRKVADGGLF 124 Query: 89 VSRKESIKNLLEITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 +++ + K L+I +G+ ++ + + +I +IL+ + I LN+S +T+ Sbjct: 125 INQAVAEKLTLQILHGRDTDAPHTG--LTDREHQIFLMILQGLGVTEIGRQLNLSVKTVS 182 Query: 149 IQKFNIMYKLKLRRMSDIVTLGI 171 K +I+ K+ LR +++V I Sbjct: 183 THKASILAKMNLRNSAELVRYAI 205 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 93.2 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 64/200 (32%), Gaps = 29/200 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGN-----KPFKVIIDTYHNHILDEE 56 I + + QG L ++ + + K P V++D + E Sbjct: 5 ILIAEDQQLVRQGLVALLAVDDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPELDGVE 64 Query: 57 AIKFLEKLDA-ERIIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITYG------- 104 A + ++++ R++VL + + A + +K L+ Sbjct: 65 ATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINAVCAGKTY 124 Query: 105 ------------KHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKF 152 + + +++QLI + I L I+ +T++ + Sbjct: 125 LGPGLSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGIAIKTVETHRT 184 Query: 153 NIMYKLKLRRMSDIVTLGIT 172 IM KL L +++ I Sbjct: 185 KIMQKLDLHNSAELAAYAIR 204 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 93.2 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 61/197 (30%), Gaps = 31/197 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 + L+ L G L + ++ + I V + P V++D + Sbjct: 21 VLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPGVTGI 80 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGK----- 105 EA + L + +++ + +V + + + Sbjct: 81 EATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVARGEA 140 Query: 106 -------------HLPHKNSQL--CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ 150 S + + +I+ L+ K+ + I L +SQ+T+K Sbjct: 141 VYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQKTVKNH 200 Query: 151 KFNIMYKLKLRRMSDIV 167 +I KL++ + V Sbjct: 201 LTSIFAKLQVADRTQAV 217 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 92.8 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 37/211 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNK-PFKVIIDTYHNHILDE 55 + + + +G + I++ + + + P V++D Sbjct: 89 VLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRMPKRTGI 148 Query: 56 EAIKFLEKLDAERIIVLAPYHISKL-----KAKAPIYFVSRKESIKN------------- 97 EA ++++ I++ + + ++ ++ SI Sbjct: 149 EACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVHGGQS 208 Query: 98 -------------LLEITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQ 144 + H+ + + ++++L+ K N +I L IS+ Sbjct: 209 LISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQLFISE 268 Query: 145 QTLKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 T+K NI+ KL+L + V + Sbjct: 269 NTVKNHVRNILEKLQLHSRMEAVVYAVREKL 299 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 92.0 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 27/205 (13%), Positives = 69/205 (33%), Gaps = 35/205 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVG------NKPFKVIIDTYHNHILDE 55 + + + L +G L + + + + ++ N+P V++D + Sbjct: 7 LIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPRMDGV 66 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKH---- 106 +A + ++K E +++ H + A +V + S + Sbjct: 67 QATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGGKI 126 Query: 107 --------------------LPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 +S + + +I QL+ + I L +S +T Sbjct: 127 YLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSVKT 186 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGI 171 ++ + N+M KL + +++ L + Sbjct: 187 VEKHRSNLMQKLGVHSAAELRALAL 211 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 92.0 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 65/194 (33%), Gaps = 25/194 (12%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL----SEIKKVGN--KPFKVIIDTYHNHILDE 55 I + L +G + ++ E+ ++ + +P V++D Sbjct: 6 ILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMPGTGGV 65 Query: 56 EAIKFLEKLD-AERIIVLAPYHISKLKAK---APIYFVSRKESIKNLLEITYGKHLPHKN 111 E ++ L LD +++V Y +L + + S + + H Sbjct: 66 EVLRRLRGLDDPPKVVVFTAYDDERLLEALREGARGCLLKGASRTEIFDAVRTVHAGGSV 125 Query: 112 SQL---------------CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMY 156 + + ++++L+ + + L IS++T+K +++ Sbjct: 126 IPPEITARVLKEMRGESEPLTPRELEVLRLVARGLTNREVARALFISERTVKFHVSSLLA 185 Query: 157 KLKLRRMSDIVTLG 170 KL+ + V + Sbjct: 186 KLRAENRTQAVAIA 199 >UniRef50_C1TL94 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL94_9BACT Length = 215 Score = 92.0 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 72/206 (34%), Gaps = 34/206 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI------NSLSEIKKVGNKPFKVIIDTYHNHILDE 55 + + L+G + + + + + + + P V++D + Sbjct: 4 LIIADDHELFLEGVRDILSREDDLDVLALARTGQEALELTLQHHPDVVVMDVTMPKMNGI 63 Query: 56 EAIKFLEK-LDAERIIVLAPYHISKLKA----KAPIYFVSRKESIKNLLEITYGK----- 105 EA + ++ L +I+ L+ + +L A + ++ S + L+ + Sbjct: 64 EASRRIKSSLGDVKILALSMHADKRLIAEILKAGASGYALKEGSSEELIRAIHIVSSGET 123 Query: 106 ------------------HLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 + S + +++ L+ K + + S+L+IS+ T+ Sbjct: 124 YLSPKIASILIKDYLKLLDTAVPSRASLLSDREREVLALLAKGSSTKEVASSLHISKNTV 183 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGITS 173 + IM KL +++++ I Sbjct: 184 DTHRRRIMEKLDCGNIAELIRFAIRE 209 >UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A2L6_9BACT Length = 240 Score = 92.0 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 26/197 (13%), Positives = 73/197 (37%), Gaps = 25/197 (12%) Query: 2 IFLMTKDSFLLQGFWQLK----DNHEMIKINSLSEIKKVGNK--PFKVIIDTYHNHILDE 55 + + + QG L D + +++ E +++ ++ P ++ D Sbjct: 23 VAIADDHHVVRQGIEALLRMCPDMEYVGGASTVDEARQLVHRTRPDVLVSDLSMPGGSGV 82 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 ++ L + + IV+ H + FV++ ++ L+ I H + Sbjct: 83 GFLRNLRRECPDTRIVVLTMHATALAMQDAFDSGAHAFVAKDDAFDTLVSIIRRVHSGEE 142 Query: 111 --------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMY 156 + + +++Q I K + I + L +S +T+++ + +M Sbjct: 143 FLFSRTMKEVTGGSQETPRLAPREREVLQGITKGLSTKEIGAQLFLSPKTVEVYRGRLMK 202 Query: 157 KLKLRRMSDIVTLGITS 173 K + + ++++ + S Sbjct: 203 KFNVTKGTELIHHAVAS 219 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 91.7 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 26/206 (12%), Positives = 66/206 (32%), Gaps = 34/206 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLS----EIKKVGN--KPFKVIIDTYHNHILDE 55 I L + + G L + + I + E + + P I+D + Sbjct: 7 IVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPGLNGF 66 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGK----- 105 +A + + +++ H + + ++ + + L Sbjct: 67 DATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAVRKGET 126 Query: 106 ------------------HLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 P + +I+QLI + ++ I LN+S +T+ Sbjct: 127 YLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNLSVKTI 186 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGITS 173 + + ++M +L L ++ +V + + Sbjct: 187 ETHRMHLMARLGLHDVAGVVRYALRT 212 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 91.7 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 70/201 (34%), Gaps = 35/201 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 I L+ + + +G L + + + + +K+V P V++D + Sbjct: 4 IVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPRMTGL 63 Query: 56 EAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITYGKH---- 106 EA++ + + ER +VL + F+ + + L + Sbjct: 64 EALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVANGET 123 Query: 107 --------------------LPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 PH + + ++M+LI + + I + L ++ T Sbjct: 124 LLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLGTAEGT 183 Query: 147 LKIQKFNIMYKLKLRRMSDIV 167 +K Q NI+ KL +R + V Sbjct: 184 VKNQTSNILAKLGVRDRTRAV 204 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 91.7 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 23/207 (11%), Positives = 70/207 (33%), Gaps = 36/207 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSE-------IKKVGNKPFKVIIDTYHNHILD 54 + L + G L + H + + + +E + + + P +I+D + Sbjct: 5 VLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELH-PEIIIMDISMPDMNG 63 Query: 55 EEAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPH 109 +A + + ++ H + + ++ + + + L+ H Sbjct: 64 IDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTVLSNH 123 Query: 110 KNSQLC-----------------------FSHNQFKIMQLILKNKNESNITSTLNISQQT 146 + + +++QL+ + + I + L++S +T Sbjct: 124 TYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHVSVKT 183 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGITS 173 ++ + NI KL + +++++ I Sbjct: 184 VETHRRNITQKLGVGSVAELIKYAIRE 210 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 91.7 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 23/208 (11%), Positives = 70/208 (33%), Gaps = 37/208 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKVGN-KPFKVIIDTYHNHILDE 55 + ++ +G L + + + KP V +D + Sbjct: 6 VLIVDDHPLFREGVKSLVERSANYQAVGEAGCGAEALALAQELKPDLVTMDVSLPDMSGI 65 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLE---------- 100 E ++ + L E I++ + +++ +V ++ + L++ Sbjct: 66 EVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQGFDALCRGEF 125 Query: 101 ITYGKHLPHKNSQLC----------------FSHNQFKIMQLILKNKNESNITSTLNISQ 144 G+ ++L + + ++++L+ + + I + + +S Sbjct: 126 FVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQIAAAIELSP 185 Query: 145 QTLKIQKFNIMYKLKLRRMSDIVTLGIT 172 +T++ + N+M KL + ++V Sbjct: 186 KTVENHRTNLMKKLDVHSKMELVKYAAR 213 >UniRef50_B1ZU68 Two component transcriptional regulator, LuxR family n=2 Tax=Opitutus terrae PB90-1 RepID=B1ZU68_OPITP Length = 238 Score = 91.3 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 17/201 (8%), Positives = 63/201 (31%), Gaps = 30/201 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKV------GNKPFKVIIDTYHNHILDE 55 + ++ + + Q + + +E + ++P V++D + Sbjct: 11 VMMVEDHTAIRQMLAAFVAAMPGFHVVAEAESVEQALAMAELHRPSVVVLDWMLSGRSGL 70 Query: 56 EAIKFLEKLDAERIIVLAP----YHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK- 110 ++ + R++V + + + A ++ + + Sbjct: 71 GFVRDIRIDPPPRVLVFSAITSALAVREALAAGAKGYLEKTAPFDEFKMALRSVAAGREY 130 Query: 111 -------------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 + ++ + ++++ + + I L +S +T++ + Sbjct: 131 LGASAKRLLQQEAHAAMRLGAGPALTNREREVLRYVAEGLGSKEIADRLALSTRTVENHR 190 Query: 152 FNIMYKLKLRRMSDIVTLGIT 172 NI+ + LR ++ +V Sbjct: 191 ANILKRTGLRSVAQLVLYAAR 211 >UniRef50_A1VIF2 Two component transcriptional regulator, LuxR family n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VIF2_POLNA Length = 219 Score = 91.3 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 22/195 (11%), Positives = 64/195 (32%), Gaps = 29/195 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKIN-----SLSEIKKVGNKPFKVIIDTYHNHILDEE 56 + L+ + +G + + ++ + +L + + V++D I E Sbjct: 11 VLLVDDHTLFREGMRLMLGSSPLVHAHILDAGNLPDALALQQSVDLVLLDIGLPGIGGLE 70 Query: 57 AIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITYG------- 104 + + + + +IV+ H + +K FVS+ + + Sbjct: 71 GLLSVRQRWPDAVIVMLSAHDRPELVREALSKGACGFVSKTAQPVQICQEVRRWLYQQRG 130 Query: 105 ------------KHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKF 152 + Q+++++L+ + + I L++S+ T++ Sbjct: 131 PEPQPQALPGEAAAGAIPGGDESLTPRQYEVLKLLAQGLSNKAIAFKLHLSEHTIRNHVV 190 Query: 153 NIMYKLKLRRMSDIV 167 I+ ++ V Sbjct: 191 AILRHFNALTRTEAV 205 >UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=Flavobacteriales RepID=A0M4P6_GRAFK Length = 205 Score = 91.3 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 72/196 (36%), Gaps = 26/196 (13%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNK-PFKVIIDTYHNHILDE 55 + + + L+ G + E I+ N I+ K P +I D + Sbjct: 4 LVIAEDHTALIDGIKVFFEYEEDIEFVGFANNGQELIELTRRKKPNLIITDIRMPVMDGI 63 Query: 56 EAIKFLEKLDAE-RIIVLAPY----HISKLKAKAPIYFVSRKESIKNLLEITYGKHLP-- 108 +A K + + +II + + + ++ ++ + S+K LL H Sbjct: 64 QATKEILEEFPNIKIIAFSMFDQDKAVQQMLEAGASGYILKNSSLKELLYAIRKVHEGEH 123 Query: 109 -------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIM 155 S+ + Q +I++LI + + I L I + T++ + N++ Sbjct: 124 YYDPNITVKQKSVSPKSKAVLTGRQREILKLIGQGRTNQEIADQLFIGKTTVETHRKNMI 183 Query: 156 YKLKLRRMSDIVTLGI 171 KL L+ +++ + Sbjct: 184 RKLGLQGAGELLRYAL 199 >UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms RepID=B9PAD6_POPTR Length = 326 Score = 91.3 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 24/200 (12%), Positives = 59/200 (29%), Gaps = 30/200 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSE----------IKKVGNKPFKVIIDTYHNH 51 + L+ + + G +++ ++ + G P VI D Sbjct: 117 VLLIDDHALVRDGMRMHLTLQPGLEVVGEADDGEAALAWLAAAEAGRMPDLVITDIGMRG 176 Query: 52 ILDEEAIKFLEKLDAERIIVLAPYHI-----SKLKAKAPIYFVSRKESIKNLLEIT---- 102 + L E +++ H + +V + LL Sbjct: 177 MGGIALAGALHDRYPELAVLIVSMHDNLEYVRQAIRAGARGYVLKDAPADELLAAIQAVL 236 Query: 103 -----------YGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 G + + + I+ I + + +I L +S +T++ + Sbjct: 237 AGRVFYSARIARGMAAQAVSPLDALTPRERDILHGIGRGQANKDIAVQLGVSVRTVETHR 296 Query: 152 FNIMYKLKLRRMSDIVTLGI 171 N+ KL + +++V + Sbjct: 297 LNLKRKLGIEGRAELVKYAV 316 >UniRef50_B3RA82 Response regulator protein; Response regulator receiver domain, HTH LuxR domain; higly similar to B. subtilis Transcriptional regulatory protein degU (Protease production enhancer protein) n=1 Tax=Cupriavidus taiwanensis RepID=B3RA82_CUPTR Length = 223 Score = 91.3 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 79/198 (39%), Gaps = 28/198 (14%) Query: 2 IFLMTKDSFLLQGFW-QLKDNHEMIKINSLSEIKKVG-----NKPFKVIIDTYHNHILDE 55 + L+ F+L G +L+ EM I + +++ + P V+ D + Sbjct: 7 VLLVDDHPFVLDGVRLRLEATGEMTVIGQAASVEEAIVLAGRHAPDLVVSDIHMPDANGL 66 Query: 56 E-AIKFLEKLDAERIIVLA----PYHISKLKAKAPIYFVSRKESIKNLLEITYGK----- 105 + A +F E+ + R+I L+ P ++ + A +V ++ L+ Sbjct: 67 QLAARFAEQFPSVRVIALSMHKDPEYVRRAFALGVAAYVLKEAPAHELVTAIRTVAAGGT 126 Query: 106 ------------HLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFN 153 P +S+ + + +++L+ + ++ I L S +T++ + + Sbjct: 127 YLNAELQAFLHTDEPPPSSRRALTPKEATVLKLLAEGRSNKEIAERLGTSVRTVETHRLH 186 Query: 154 IMYKLKLRRMSDIVTLGI 171 + KL++ +++V + Sbjct: 187 LRRKLRVGGRAELVKYAV 204 >UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ84_DESAH Length = 218 Score = 91.3 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 74/206 (35%), Gaps = 34/206 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVG-NKPFKVIIDTYHNHILDE 55 I L+ L Q + + +K+ N L ++ + P VI+D + Sbjct: 8 ILLVDDHDILRQSLKKALEEKPNVKVLQGACNGLDAVRLTEKHCPNIVIMDINMPDLNGI 67 Query: 56 EAIKFLEKLDAERIIV-----LAPYHISKLKAKAPIYFVSRKESIKNLLEIT------YG 104 EA K + + + I+ +++ + F+ + S+++L Sbjct: 68 EAAKQIISKNPDIKIIALSMLCDEFNVKSMIQAGAKGFLLKTSSLEDLHTAILMVASGKS 127 Query: 105 KHLPHKNSQLC-----------------FSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 P + + + + ++QLI + I+ LNIS++T+ Sbjct: 128 YLCPEALNIMMEDIQTPGDTKLLCPLQRLTLRERGVIQLIAEGYTSQEISEKLNISKRTV 187 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGITS 173 + + N M KLK+ ++ + + Sbjct: 188 DVHRTNTMNKLKIHTIAGLTRFAVKE 213 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 90.9 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 23/203 (11%), Positives = 69/203 (33%), Gaps = 33/203 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKK-VGNKPFKVIIDTYHNHILDE 55 + + + + +G + D I++ N + + + + P V++D Sbjct: 13 VLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDITMPEESGL 72 Query: 56 EAIKFLEKLDAERIIVLAPYHISKLKAK-----APIYFVSRKESIKNLLEITYGKHLP-- 108 +A L + + ++L H + ++ + + + L H Sbjct: 73 KAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRAVHAGGT 132 Query: 109 -------------------HKNSQL-CFSHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 +QL + + ++ + + I + L IS++T++ Sbjct: 133 FFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGISRRTVE 192 Query: 149 IQKFNIMYKLKLRRMSDIVTLGI 171 + ++M KL++ ++ + + Sbjct: 193 AHRESLMRKLQIHSVAGLTRFAL 215 >UniRef50_Q0A525 Two component transcriptional regulator, LuxR family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A525_ALHEH Length = 214 Score = 90.9 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 75/198 (37%), Gaps = 26/198 (13%) Query: 2 IFLMTKDSFLLQGFWQLKDNH----EMIKINSLSEIKKVGNKPFK--VIIDTYHNHILDE 55 + L+ + + G+ +L + ++ + +S + + V++D I Sbjct: 12 LLLVDDHAVVRAGYRRLLEQASRCWQVTEADSGESAYRACARERFDVVVMDISLPGISGL 71 Query: 56 EAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITYGKH---- 106 E + L++ E +++ H + + ++++ + + L+E Sbjct: 72 ETLARLQRRAPEIRVLIFSMHEEPVFAEQALSGGAAGYITKSSAPEVLVEAVQRIAAGGH 131 Query: 107 -------LPHKNSQL----CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIM 155 H ++ S +F+I +L+ + + I LNIS +T+ I Sbjct: 132 YLGPDVRCRHGDADTAGLQSLSAREFEIFRLLAEGCGSAEIARLLNISYKTVANYGSGIR 191 Query: 156 YKLKLRRMSDIVTLGITS 173 KL L ++++ L I + Sbjct: 192 EKLALNNVAEMTRLAIRA 209 >UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48EF Length = 220 Score = 90.9 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 61/197 (30%), Gaps = 27/197 (13%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKV-GNKPFKVIIDTYHNHILDE 55 I L L +G L +++ + V +P + +D Sbjct: 6 IVLADDHVILREGLRALISAQPDLEVVGEAASGTETVDCVRATEPRVLCLDLSMPGWGSA 65 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHL--- 107 I + +L +++ H + A + + +LL Sbjct: 66 TTITRVTQLAPRTRVLVLTMHNDPAYVRSALAAGAAGYFLKTTPSPDLLAAIRAVATGAR 125 Query: 108 -------------PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNI 154 P + S + ++++L++K I L +S +T++ + + Sbjct: 126 VIDPALGDVLGGPPPPAERSQLSRRETEVLELLVKGLTHQEIADQLFLSVKTVETYRARL 185 Query: 155 MYKLKLRRMSDIVTLGI 171 K L+ +D V G+ Sbjct: 186 REKTGLKTRADYVRYGL 202 >UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT Length = 229 Score = 90.9 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 78/205 (38%), Gaps = 34/205 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSE-----IKKV-GNKPFKVIIDTYHNHILDE 55 I L+ + +G Q+ N + + +E ++ V KP V+ D Sbjct: 15 ILLVDDHPMMREGLRQIIGNEIDLAVCGEAENAFQALELVKSEKPDLVLADITLPDKNGL 74 Query: 56 EAIKFLEKLDAERIIVLAPYHISKLKA-----KAPIYFVSRKESIKNLLEITY------- 103 E +K L+ + +++ H L A ++ + E K +++ Sbjct: 75 ELLKDLQAQHPKLPVLVISMHDEALYAERVLRAGGRGYIMKHEGGKKIMQAIRHVLSGQI 134 Query: 104 ---------------GKHLPHKNSQL-CFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 G +S + + +F++ +LI + + I + +++S +T+ Sbjct: 135 FVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKEIAANMHVSAKTV 194 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGIT 172 ++ + NI KL L+ ++++ + Sbjct: 195 EVHRMNIKTKLGLKTAAELIRYTVR 219 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 90.9 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 27/204 (13%), Positives = 66/204 (32%), Gaps = 33/204 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKVI-IDTYHNHILDE 55 I L+ S G L D ++ I++ + + V+ +D + Sbjct: 6 IILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMPGMNGA 65 Query: 56 EAIKFLEKLDA-ERIIVLAPYHIS----KLKAKAPIYFVSRKESIKNLLEIT-------- 102 E + L+ ++I L+ + ++ F+ + + +L Sbjct: 66 ETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETVAAGGT 125 Query: 103 --------------YGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 ++ S S + +I+ + + + I L IS++T+ Sbjct: 126 YFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFISKRTVD 185 Query: 149 IQKFNIMYKLKLRRMSDIVTLGIT 172 + NI+ K + + +V + Sbjct: 186 KHRANILEKTGCKNTASLVVYAVR 209 >UniRef50_C6Y2F0 Response regulator receiver n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y2F0_PEDHD Length = 206 Score = 90.9 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 73/196 (37%), Gaps = 27/196 (13%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLS------EIKKVGNKPFKVIIDTYHNHILDE 55 IF++ +++G L N + + + ++P +++D Sbjct: 7 IFVVDDHYMVIEGIRSLLQNEKTLDWMGHATNAASCLSFLKLHEPDVILMDVNLPDKSGI 66 Query: 56 EAIKFLEKLDA-ERIIVLAPYH----ISKLKAKAPIYFVSRKESIKNLLEITYGKH---- 106 + K +++L ++ L+ ++ I + +V + + + LLE Sbjct: 67 DLCKEVKQLYPSVAVLGLSTFNQQAIIKNMIDNGASGYVLKNATKEELLEAINAVSKGKV 126 Query: 107 -----------LPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIM 155 +P + QL + + +++ LI + + I L IS T+ + +++ Sbjct: 127 YYSQEAFSSLRIPAPD-QLLITRREKEVLLLIAEGLTNAEIAEKLFISIPTVNTHRKSLI 185 Query: 156 YKLKLRRMSDIVTLGI 171 K ++ + ++ I Sbjct: 186 EKFNVKNTAMLIGKAI 201 >UniRef50_C5D3Y5 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacillus RepID=C5D3Y5_GEOSW Length = 199 Score = 90.5 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 81/187 (43%), Gaps = 20/187 (10%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL------SEIKKVGNKPFKVIIDTYHNHILDE 55 + L+ ++ G QL +N +++ + E + + + P +++D + Sbjct: 5 VLLVDDHLLVMLGIQQLLENEADLEVVNTICHPARLEEEIIKHNPDVIVMDIRMKNDNGI 64 Query: 56 EAIKFLEKLDAE-RIIVLAPY----HISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 E K + + ++++L+ Y +I FV+++ S L HL K Sbjct: 65 EWTKKIAETYPTCKVVILSGYDYDEYIHAAYEAGAYAFVTKENSAFELANAIRQSHLGIK 124 Query: 111 NSQL--------CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKL-R 161 + + + + I+QLI ++K + I+ LNIS++T++ +I+ KL + Sbjct: 125 SFPIDRLSNYNSPLTKIELNILQLISEDKTNTEISELLNISRRTVEHHVSSILRKLDVDS 184 Query: 162 RMSDIVT 168 R+ +V Sbjct: 185 RVGAVVK 191 >UniRef50_C1F244 Two-component system response regulator n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F244_ACIC5 Length = 214 Score = 90.5 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 72/208 (34%), Gaps = 35/208 (16%) Query: 3 FLMTKDSFLLQGFWQLKDNHEMIKINS-----LSEIKKVGNKPFKVIIDTYHNHILDEEA 57 + L G + + I + + K + KP V+ID + EA Sbjct: 4 LIADDHMLLRAGVRDAIERNGGIVCDEATTGREAFDKAILYKPTLVVIDVTMPELNGIEA 63 Query: 58 IKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGK------H 106 + + +++ H + ++ + ++ + LL+ Sbjct: 64 TRRILNALPTVKVIILTQHQSNELVRSAVEAGARGYLLKTDTGQILLQAIQSVMAGGTFF 123 Query: 107 LPHKNSQL-------------------CFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 P + + + +++QL+ + K+ S L S T+ Sbjct: 124 SPVITDVVLQSLARSVHLTGPGIVYKERLTPREGEVLQLLAEGKSTKEAASVLGTSTFTV 183 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGITSYF 175 + Q+ N+M KL+LR +SD+V + ++ Sbjct: 184 ETQRKNVMRKLRLRNVSDLVRYAVRNHM 211 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 90.5 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 64/198 (32%), Gaps = 29/198 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKV-GNKPFKVIIDTYHNHILDE 55 I L+ +G L +I + L +K ++P V++D + Sbjct: 8 ILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDVEMPVMNGP 67 Query: 56 EAIKFLEKLDAERIIVLAPY-----HISKLKAKAPIYFVSRKESIKNLLEITY------- 103 EA+ + +++ ++ K ++ + L+E Sbjct: 68 EALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQAVAGQQ 127 Query: 104 ---------GKHLPHKNSQL--CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKF 152 G+ +P ++S + + + +++ + + I + +S+ T+K Sbjct: 128 TVSPEMNNAGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSENTVKAHMQ 187 Query: 153 NIMYKLKLRRMSDIVTLG 170 NI KL + Sbjct: 188 NIFRKLNIDNRVRAAVYA 205 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 90.5 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 68/205 (33%), Gaps = 35/205 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 I L + G L + ++ + + + V + +P ++ D + Sbjct: 4 IVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGMSGI 63 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 E + K + +V+ + + + +V + + + L+ H+ Sbjct: 64 EVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQGHR 123 Query: 111 NSQLCFSH------------------------NQFKIMQLILKNKNESNITSTLNISQQT 146 S + +++ L+ + + I L IS +T Sbjct: 124 YLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFISPRT 183 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGI 171 +++ + N+M KL LR + ++ + Sbjct: 184 VEVHRANMMRKLDLRNQTQLLRYAL 208 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 90.1 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 68/206 (33%), Gaps = 34/206 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINS------LSEIKKVGNKPFKVIIDTYHNHILDE 55 + L L+G +L + I++ + +P ++D + Sbjct: 5 VLLADDHEMFLEGLRELLGKADGIELAGLARDGAEAVAAAERLQPDVALMDMTMPRLNGI 64 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEIT----YGKH 106 +A + + +++ H I + +V ++ S + L G++ Sbjct: 65 QATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQTVANGQY 124 Query: 107 LPHKN-------------------SQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 S S + +++L++K N I L+IS+ T+ Sbjct: 125 YLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSISKNTV 184 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGITS 173 + +I+ KL M+++ I Sbjct: 185 DTHRRHILDKLGCNSMAELTRYAIRE 210 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 90.1 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 26/202 (12%), Positives = 67/202 (33%), Gaps = 31/202 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 + L+ + +G + E I++ + I + +P +++D Sbjct: 10 VLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGTDGI 69 Query: 56 EAIKFLEKL-DAERIIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITYGKHL--- 107 EA++ L +L + R++++ + + +V + L H Sbjct: 70 EALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSVHAGHV 129 Query: 108 -----------------PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ 150 P + + + +++ I ++ I L +S++T+K Sbjct: 130 LLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEKTVKTH 189 Query: 151 KFNIMYKLKLRRMSDIVTLGIT 172 NI+ KL + + + Sbjct: 190 VSNILMKLDVADRTQAALWAVR 211 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 89.7 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 66/195 (33%), Gaps = 24/195 (12%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI------NSLSEIKKVGNKPFKVIIDTYHNHILDE 55 I ++ + G + + + + + + P V++D Sbjct: 9 ILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDLRLPGANGT 68 Query: 56 EAIKFLEKLDAE-RIIVLAPYH----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 A L + + R+++ + I + ++ + + + LL + Sbjct: 69 AATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAIRAVAAGER 128 Query: 111 N-------------SQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYK 157 + + S + +++QLI + K I + L IS++T+K N+ K Sbjct: 129 HLSAALAQRLAGRVAAPDVSDREREVLQLIARGKANKEIAAALGISEETVKRHASNLFVK 188 Query: 158 LKLRRMSDIVTLGIT 172 + + + + GI Sbjct: 189 MGVADRAQATSEGIR 203 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 89.7 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 70/202 (34%), Gaps = 32/202 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLS------EIKKVGNKPFKVIIDTYHNHILDE 55 + ++ + + G + E I++ + +P V++D + Sbjct: 6 VLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMPEMSGL 65 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLP-- 108 E +K L + ++L H + + A + +V +K + L + + Sbjct: 66 ECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRAVYSGEM 125 Query: 109 -------------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 + + S + K++ LI I L IS +T++ Sbjct: 126 YIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISVKTVET 185 Query: 150 QKFNIMYKLKLRRMSDIVTLGI 171 K+ IM KL ++ SD+V + Sbjct: 186 YKYRIMEKLNCKKRSDLVKFAL 207 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 89.3 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 21/199 (10%), Positives = 68/199 (34%), Gaps = 30/199 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL------SEIKKVGNKPFKVIIDTYHN-HILD 54 + ++ + + QG + I++ + V ++P +++D + + Sbjct: 6 VVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAVKDRPDVMLMDVHMPQGLDG 65 Query: 55 EEAIKFLEKLDAERIIVLAPY-----HISKLKAKAPIYFVSRKESIKNLLEITYGKHLPH 109 + L ++ + +++ H+ K+ V + + ++ H Sbjct: 66 ITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAIQHGQPGH 125 Query: 110 K------------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 + S + +++ L+ + + L+IS +T++ + Sbjct: 126 PYLSRRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHISVKTVETHR 185 Query: 152 FNIMYKLKLRRMSDIVTLG 170 +IM ++ L + +V Sbjct: 186 QHIMRRIGLHSRAALVRYA 204 >UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF2_DESMR Length = 218 Score = 89.3 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 20/206 (9%), Positives = 67/206 (32%), Gaps = 37/206 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLS----EIKKVGNK--PFKVIIDTYHNHILDE 55 + ++ +G + + + E + P ++D Sbjct: 6 LLIVDDHPLFREGLKAILRRDPSYAVAGEAGSYAEALRTAKDCRPDLAVLDISLPDRSGI 65 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 + + L ++ I++ H +++ + ++++ + NLL Sbjct: 66 QLARELRQMLPSLGILMVSMHAKVDYVAEALKVGALGYLTKDAATDNLLSGLRAVAAGQP 125 Query: 111 --------------------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQ 144 ++ + + ++M+L+++ + + + L IS Sbjct: 126 WLDPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNKEVAAALEISV 185 Query: 145 QTLKIQKFNIMYKLKLRRMSDIVTLG 170 +T + + ++M KL ++ ++V Sbjct: 186 KTAEHHRGSLMRKLGMQNSVELVRYA 211 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 89.0 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 66/202 (32%), Gaps = 34/202 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEI------KKVGNKPFKVIIDTYHNHILDE 55 + + QG L +++ +E +P V++D + Sbjct: 12 VLITDDHPVFRQGLRGLL-EALGVEVVGEAESGPQAVQLAAELQPDVVVMDLHMPGGNGI 70 Query: 56 EAIKFLEKLDA-ERIIVLAPYHIS----KLKAKAPIYFVSRKESIKNLL----------- 99 EA + + + ++VL + ++ ++ + + Sbjct: 71 EATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVRAVAAGEA 130 Query: 100 ---------EITYGKHLPHKNSQ--LCFSHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 +TY +P + + +++QLI + ++ I TL +S +T++ Sbjct: 131 IYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLFLSPKTVR 190 Query: 149 IQKFNIMYKLKLRRMSDIVTLG 170 NI KL + + + L Sbjct: 191 NHVSNIFMKLHVADRAQAIVLA 212 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 89.0 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 74/205 (36%), Gaps = 35/205 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLS----EIKKVGNK--PFKVIIDTYHNHILDE 55 + L + + QG L + I+I + E ++ K P +++D + Sbjct: 33 VLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREAVQMAQKLTPDVILMDIAMPLMNGL 92 Query: 56 EAIKFLEKLDAE-RIIVLAPY----HISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 EA + + ++ +++VL+ Y ++ KL ++ + + +L+ H + Sbjct: 93 EATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAVRETHKGNA 152 Query: 111 ------------------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 + + + + + I+ K I + IS +T Sbjct: 153 FFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIACDMGISIKT 212 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGI 171 ++ + +M KL + ++ + I Sbjct: 213 VEKHRQQVMNKLNIHEVASLTRYAI 237 >UniRef50_A1ATT6 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ATT6_PELPD Length = 203 Score = 89.0 bits (219), Expect = 7e-17, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 62/198 (31%), Gaps = 27/198 (13%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLS-------EIKKVGNKPFKVIIDTYHNHILD 54 + + QG L E I I + E+ + +P ++D + Sbjct: 4 VLIADDHVMFRQGLINLLTTAEDIHIAAECGDGATALELIRSL-EPDIAVLDITMPKLDG 62 Query: 55 EEAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITYGKHLP- 108 + + L ++ H + + F+ + ++ + LL Sbjct: 63 ISITRAMGNLGLATRAIILTMHDDPLMYGRAVSAGAHGFILKDDAYEELLSALRTVAAGG 122 Query: 109 ------------HKNSQLC-FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIM 155 + + + +I+ LI I L IS +T+ + N+M Sbjct: 123 TAISRAIQHAAIEPEPPVAELTEREREILGLIAHGCTNRMIAQHLGISIKTVNNHRTNLM 182 Query: 156 YKLKLRRMSDIVTLGITS 173 KL L +++V + + Sbjct: 183 GKLNLHSTAELVRYSLLT 200 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 88.6 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 27/200 (13%), Positives = 64/200 (32%), Gaps = 29/200 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKV-IIDTYHNHILDE 55 I L L +G L + E + + ++K P + ++D H+ Sbjct: 10 ILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKAAKTPVDIALLDLSMPHMGGL 69 Query: 56 EAIKFLEKLDAERIIVLAPYHISK-----LKAKAPIYFVSRKESIKNLLEITYGKHLP-- 108 E ++ L+ + +++ H + ++ + L Sbjct: 70 ECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALRTVAAGGR 129 Query: 109 ----------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKF 152 S + ++++LI+ + S I L +S +T+ K Sbjct: 130 YLGEREAELLIDGALEEPEEPAALSTREREVLELIVHGYSLSTIADKLYLSIKTVSTYKT 189 Query: 153 NIMYKLKLRRMSDIVTLGIT 172 ++ KL + S++V + Sbjct: 190 RLLQKLDCTQNSELVDYALR 209 >UniRef50_B5EEC0 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=B5EEC0_GEOBB Length = 216 Score = 88.6 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 69/201 (34%), Gaps = 31/201 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVG-NKPFKVIIDTYHNHILDE 55 I L +G L + E + + + +S ++K N P V++D + Sbjct: 5 IILADDHVMFREGMRALLEREEDMVVVAEAGDGVSVVEKTLENMPDVVVLDLSMPGMNGT 64 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYG------ 104 EA + + I++ H + + F+ ++ + + L+ Sbjct: 65 EAASVIHQKVPGIGIIILSMHSDRQYVIEALKLGVKSFILKEWAFQELVTAVRCVFKDTS 124 Query: 105 --------------KHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ 150 + + + + +L++ KN I L IS +T++ Sbjct: 125 YLSPRLSDIIISGLADEGKPLGKYSLTPREEQAYRLLVAGKNCKEIGYELKISSKTVETY 184 Query: 151 KFNIMYKLKLRRMSDIVTLGI 171 + +M KL + ++ +V + Sbjct: 185 RLKVMKKLNISNIAQLVNHAV 205 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 88.2 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 24/197 (12%), Positives = 68/197 (34%), Gaps = 28/197 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKVI-IDTYHNHILDE 55 ++L+ + G L ++ + + + + + V+ +D + Sbjct: 4 VYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVMDGV 63 Query: 56 EAIKFLEKLDAE-RIIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITY------- 103 EA + + + R++VL + + + A I +V + +LL + Sbjct: 64 EATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAAARGEV 123 Query: 104 -------GKHLPH---KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFN 153 G LP + S + ++++L+ + + L I+++T+K Sbjct: 124 PIDPRVAGALLPSAGGPSVADRLSPRETQVLRLVAQGLANKQVARALGITERTVKAHLGR 183 Query: 154 IMYKLKLRRMSDIVTLG 170 + ++ + + Sbjct: 184 VFREIGVLDRTSAALWA 200 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 88.2 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 66/197 (33%), Gaps = 27/197 (13%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGN------KPFKVIIDTYHNHILDE 55 + L+ +L G + + + I++ + + + G +P V++D + Sbjct: 9 VLLIDNHPLVLDGLKAVLETFDHIEVAGTAGLAQTGLDIARQIQPQVVLMDINMPKLSGI 68 Query: 56 EAIKFLEKLDAERIIVLAPYHISKLK-----AKAPIYFVSRKESIKNLLEITYGKHLP-- 108 +AI+ E +V+ H S+ +V + S ++ Sbjct: 69 DAIELFRNEFPEIRVVMLSMHDSREYISSSVMHGAAGYVLKDVSTDEIVAAIETVADGGT 128 Query: 109 --------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNI 154 + + + I+ LI+ ++ I L IS T + + N+ Sbjct: 129 YFSSGVFDALMGERAEEGSDPLTPREHDILGLIVAGRSNREIAEVLGISSATAETHRKNL 188 Query: 155 MYKLKLRRMSDIVTLGI 171 KL + + ++ + Sbjct: 189 KKKLGIATTAGLIRYAL 205 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 87.8 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 78/200 (39%), Gaps = 30/200 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVG------NKPFKVIIDTYHNHILDE 55 I L+ + G +L + ++ +++ + ++ + + P +++D + Sbjct: 7 IMLVDDHEVVRSGLRRLLEQNDGVEVIAEADSGEQAYQFYGEHMPDVIVMDMSMPGMGGL 66 Query: 56 EAIKFLEKLDAERIIVLAPYHI-----SKLKAKAPIYFVSRKESIKNLLEITY------G 104 EA++ + + +++ H S+ +V++ + +L++ G Sbjct: 67 EALRRIIARYPQARVIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQAVREVAQGKG 126 Query: 105 KHLPHKNSQLCF-------------SHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 P Q+ S +F++ +L+ K I++ L ISQ+T+ + Sbjct: 127 YLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQKTVANYQ 186 Query: 152 FNIMYKLKLRRMSDIVTLGI 171 + KL + ++V L I Sbjct: 187 TLLKQKLGITSPIELVRLAI 206 >UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E6_GEMAT Length = 213 Score = 87.8 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 63/195 (32%), Gaps = 26/195 (13%) Query: 2 IFLMTKDSFLLQGFWQLK---DNHEMIKINSLSEIKKVG---NKPFKVIIDTYHNHILDE 55 + L+ S + +G L H+++ E +P VI+D I Sbjct: 7 VVLVDDHSLVRRGLAVLLRLDGRHDVVGEAGTGEAAVPLIEAERPDLVILDLNMPGIDGL 66 Query: 56 EAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEIT-------- 102 E ++ + +++ H + + ++ + L Sbjct: 67 ETLRRVRAKGLTTRVLVLSMHDETHLVGQALSAGADGYLLKDSMDDELFFAIESVLRGQR 126 Query: 103 -------YGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIM 155 + + + + + +++QLI S + LNIS T + N+M Sbjct: 127 YLAAAIDRARLQESRMRPVSLTAREREVLQLIANGLTTSAVAEALNISPHTATRHRANLM 186 Query: 156 YKLKLRRMSDIVTLG 170 KL + ++V + Sbjct: 187 QKLNVHNQVELVRIA 201 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 87.8 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 77/203 (37%), Gaps = 29/203 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 ++L+ F+LQG + E I+I N IK++ P ++D + Sbjct: 4 VYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGLNGI 63 Query: 56 EAIKFLEKLDA-ERIIVLAPYH----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 E + ++K + +I+L+ ++ + + + +V + + L+E Sbjct: 64 EVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARRGEP 123 Query: 111 ------------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKF 152 + + +++ +++ + +I TL IS+ T+K Sbjct: 124 VLTPGVAKKIMKRAARKGRKTEPLTPREKEVLACLVRGNSNRDIAKTLCISETTVKTHVS 183 Query: 153 NIMYKLKLRRMSDIVTLGITSYF 175 NI+ KL ++ + V I + Sbjct: 184 NILKKLDVKDRTQAVIKAIENNL 206 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 87.8 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 70/201 (34%), Gaps = 31/201 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKVGNKPFKV-IIDTYHNHILDE 55 +F+ + QG QL + I + G + V ++D Sbjct: 5 VFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMPGKGGI 64 Query: 56 EAIKFLEKLDAERIIVLAPY-----HISKLKAKAPIYFVSRKESIKNLLEITY-----GK 105 + IK L + +R +++ + ++ +++++ + ++L+ G+ Sbjct: 65 DLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRKVARGGR 124 Query: 106 HLPHKNS---------------QLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ 150 + S +++IM L+ K I L +S T+ Sbjct: 125 FVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPNTISTY 184 Query: 151 KFNIMYKLKLRRMSDIVTLGI 171 + I+ KL L+ ++++ I Sbjct: 185 RKRILEKLDLKSNAELMRYAI 205 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 87.8 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 68/199 (34%), Gaps = 28/199 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMI-----KINSLSEIKKVGNKPFKVI-IDTYHNH-ILD 54 + L+ S + +G I N S ++ VI +D I Sbjct: 6 VALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMPGGIDG 65 Query: 55 EEAIKFLEKLDA-ERIIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITYGKHL-- 107 E + L++L II+L+ Y I ++ ++ + LLE G Sbjct: 66 IETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIRGAMAGK 125 Query: 108 --------------PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFN 153 + + + ++++L+ + + I S L +S++T+K + Sbjct: 126 AVLAPALMQRILEAQTSKAADTLTEREREVLKLVAEGLTNAEIASRLTVSEETVKTHVAS 185 Query: 154 IMYKLKLRRMSDIVTLGIT 172 I+ KL L + + Sbjct: 186 ILRKLGLAHRTQAAIYALR 204 >UniRef50_A4XNE1 Two component transcriptional regulator, LuxR family n=2 Tax=Pseudomonadaceae RepID=A4XNE1_PSEMY Length = 210 Score = 87.4 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 23/195 (11%), Positives = 70/195 (35%), Gaps = 25/195 (12%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKVGNKPFKVI-IDTYHNHILDE 55 I L+ + + +G L + ++ + P ++ +D I Sbjct: 8 IALIDDHALVREGIRALLEVLPHFQVVGEAGSGAEAFDLLQRTPVDILLMDVGLRDINGL 67 Query: 56 EAIKFLEKLDAERIIVLAPYHISKL-----KAKAPIYFVSRKESIKNLLEI--------- 101 E + L + +++ + ++ A +V ++ + ++ Sbjct: 68 ELTRQLRERYPAIKVLMLSMYDNQEYVSSSLAVGASGYVLKEAPSREIVAAIEAIAAGGS 127 Query: 102 -----TYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMY 156 K + S+ + + +++ ++ + N + TL IS +T++ + +I Sbjct: 128 FYSGDIARKLVKPAPSEDELTPREREVLLMLAQGLNNKVMARTLQISVRTVETHRLSIRR 187 Query: 157 KLKLRRMSDIVTLGI 171 KL + + +D++ + Sbjct: 188 KLAIDKPADLLKHAL 202 >UniRef50_Q8PM22 Transcriptional regulator n=3 Tax=Xanthomonas RepID=Q8PM22_XANAC Length = 237 Score = 87.4 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 26/202 (12%), Positives = 65/202 (32%), Gaps = 32/202 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNK------PFKVIIDTYHNHILDE 55 I + + L++G L I++ +E + P V++D + Sbjct: 6 IVVAADRTILVEGMVALLQKVPGIEVVGHAEDGLACLQIAARERPDIVLVDVLLPGLNGI 65 Query: 56 EAIKFLEKLDAERIIVLAPYHI-----SKLKAKAPIYFVSRKESIKNLLEITY------- 103 + + L + + S + +++R LL Sbjct: 66 DLTRRLMQRSPNSRAICIAPSDACTQSSAVFEAGAKAYLARTSRFAELLRAIQCVIQDQT 125 Query: 104 --------------GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 + ++ + + +I+QL + + I + L++S +T+ Sbjct: 126 YISPQMSRSLIAGLRRAAKADSAYTRLTSREREIVQLYSEGLSTRQIANRLHLSVKTVGT 185 Query: 150 QKFNIMYKLKLRRMSDIVTLGI 171 + N M KL ++ ++ + I Sbjct: 186 HRENCMLKLNIQSIAQLTRYAI 207 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 87.4 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 32/202 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVG------NKPFKVIIDTYHNHILDE 55 I L+ + L G L ++ + + +E + +P +++D + Sbjct: 4 ILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSLTNSSGL 63 Query: 56 EAIKFLEKLDAERIIVLAPYHI-----SKLKAKAPIYFVSRKESIKNLLEITYGKH---- 106 AI+ L + I++ H + A +V ++ + L+ Sbjct: 64 AAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLRGEL 123 Query: 107 ----------------LPHKNSQ-LCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 P + S + +++ L+ + + I LN+S +T++ Sbjct: 124 YIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKTVET 183 Query: 150 QKFNIMYKLKLRRMSDIVTLGI 171 + M KL LR + +V + Sbjct: 184 YRTRGMEKLGLRSRAALVQFAL 205 >UniRef50_A3D3Y4 Two component transcriptional regulator, LuxR family n=46 Tax=Proteobacteria RepID=A3D3Y4_SHEB5 Length = 214 Score = 87.4 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 24/198 (12%), Positives = 64/198 (32%), Gaps = 30/198 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNK------PFKVIIDTYHNHILDE 55 I ++ S + G + + + E + P V +D + Sbjct: 11 ILVVDDHSLIFDGLLGCLAPYPELNLIGSVEDGLAVYEKCLKLRPDLVFMDLKLPGMGGF 70 Query: 56 EAIKFLEKLDAERIIVLAPYHI-----SKLKAKAPIYFVSRKESIKNLLEITY------- 103 + I+ L + E +I++ + + +V + LL Sbjct: 71 DVIRQLRQRWPEMMIIMLTATVEEKSAREALDVGANGYVLKYSPKSTLLAAIKCVCKGKN 130 Query: 104 -----------GKHLPHKNSQLCF-SHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 + + + + ++++LI + + +I L I +T++ + Sbjct: 131 FIDPSLDERQIAALSGVVDGDMPLLTPREQQVLKLICEGRRNRDIAEDLVIGLKTVETHR 190 Query: 152 FNIMYKLKLRRMSDIVTL 169 N+M KL +++++ Sbjct: 191 MNLMRKLNAHNVAELMHW 208 >UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI Length = 218 Score = 87.0 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 74/217 (34%), Gaps = 44/217 (20%) Query: 3 FLMTKDSFLLQGFWQLKDNHEMIKI----NSLSEIK---KVGNK-----PFKVIIDTYHN 50 L+ S + G L + + ++I N E+ KV P +++D Sbjct: 1 MLVDDHSIVRDGIRLLLEQADGLEIIDEANDGEEVLDKLKVLQPDPSLLPDLILMDISLP 60 Query: 51 HILDEEAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGK 105 + + + + +L +++ H I + ++ + S +++ Sbjct: 61 GMSGIQTTQVISRLYKNVRVLMLSMHNNEDYILRSVEAGAYGYILKDSSSDEMIKAIRTI 120 Query: 106 HLPHK---------------------------NSQLCFSHNQFKIMQLILKNKNESNITS 138 K Q S+ + +I+Q ++ + I Sbjct: 121 ASGEKYYSSPVASIILSGYMQQLKKGDRHGRAERQSKLSNKEKEILQFLVDGMSSREIAE 180 Query: 139 TLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 L +S +T+ + N+M +L++R +++V + + Sbjct: 181 KLQLSVRTVDNHRANMMRRLQVRNAAELVRMAVEDKL 217 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 87.0 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 25/205 (12%), Positives = 67/205 (32%), Gaps = 31/205 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVG------NKPFKVIIDTYHNHILDE 55 I + + G + + + ++ + + VI+D + Sbjct: 8 IVIADDHPIVRSGIRAVLEQRAEWWVCGEADNGETAVRLAREHAAKIVILDYSLPVLNGL 67 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEIT------YG 104 EA + + + E +++ H I + ++ + E L+ Sbjct: 68 EATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDSELVAAVAALIRGQT 127 Query: 105 KHLPHKNSQL--------------CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ 150 P + + ++ + ++++ + + ++ I + L +S +T+ Sbjct: 128 YFSPRVSECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRIAARLGVSVKTVDSH 187 Query: 151 KFNIMYKLKLRRMSDIVTLGITSYF 175 + M KL LR D+V I + Sbjct: 188 RTTAMRKLGLRNAVDLVRYAIRNKL 212 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 87.0 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 74/200 (37%), Gaps = 26/200 (13%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI----NSLSEIKKVGNK--PFKVIIDTYHNHILDE 55 + ++ + G ++ + ++ + + S + + N+ P V++D + Sbjct: 8 VLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRLPGMNGI 67 Query: 56 EAIKFLEKLDAE-RIIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 EA + + + + R++++ Y + ++S+ + L+E + Sbjct: 68 EATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRAVAGGNS 127 Query: 111 NSQLCF---------------SHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIM 155 Q + + +++L+ + + I S L IS +T++ I Sbjct: 128 VLQPTLMAALLAKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISARTVERHCDRIY 187 Query: 156 YKLKLRRMSDIVTLGITSYF 175 KL + ++ V I++ Sbjct: 188 GKLGVTSRTEAVVRAISANL 207 >UniRef50_B0SY65 Two component transcriptional regulator, LuxR family n=1 Tax=Caulobacter sp. K31 RepID=B0SY65_CAUSK Length = 222 Score = 87.0 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 77/211 (36%), Gaps = 37/211 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMI----KINSLSEIKKVGNK--PFKVIIDTYHNHILDE 55 I L S + G + ++ + ++ + ++ + P +I+D + Sbjct: 9 ILLADDHSIVRAGLREALESQPGWTICGEASNGRDAVRMAKELVPDVMILDISMPDLSGV 68 Query: 56 EAIKFLEKLDAERIIVLAPYHI-----SKLKAKAPIYFVSRKESIKNLLEIT-------- 102 + + KL +++ H ++ + FV + S N++ Sbjct: 69 IVARDVRKLKTHTELLIFTMHDSEQLVREVLSAGARGFVLKSASTDNIIAAVASLLNHKP 128 Query: 103 -----------YGKHLPHKNS-------QLCFSHNQFKIMQLILKNKNESNITSTLNISQ 144 G P ++ + + I+QL+ ++++ I S L+IS Sbjct: 129 YFCPGITDTVLRGYLSPGGHALGELIEGAETLTTRELLIVQLLAESRSNKVIASMLDISV 188 Query: 145 QTLKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 +T++ + NIM KL ++DIV I + Sbjct: 189 KTVESHRGNIMRKLGAHSLADIVRYAIRNKL 219 >UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Tax=Gammaproteobacteria RepID=UHPA_ECO57 Length = 196 Score = 87.0 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 27/187 (14%), Positives = 67/187 (35%), Gaps = 20/187 (10%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKVII-DTYHNHILDE 55 + L+ + GF QL +++ + + + + +V I D I Sbjct: 4 VALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGL 63 Query: 56 EAIKFLEKLDAERIIVL--APYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLP----- 108 E + L K A ++ + +P + + F+S++ S L+ + Sbjct: 64 ELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCYLT 123 Query: 109 -------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLR 161 Q + + ++ + + + I + L +S +T+ + + N+M KL + Sbjct: 124 PDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKLGVS 183 Query: 162 RMSDIVT 168 ++ Sbjct: 184 NDVELAR 190 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 86.6 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 22/206 (10%), Positives = 72/206 (34%), Gaps = 35/206 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNK------PFKVIIDTYHNHILDE 55 + ++ + L G + + + + + P +++D + Sbjct: 7 VLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLCPDLILMDLSLPGMNGI 66 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 +AI +++ I+ H + + +V + S +L+ L K Sbjct: 67 DAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAMRVVLLGKK 126 Query: 111 NSQLCF------------------------SHNQFKIMQLILKNKNESNITSTLNISQQT 146 + + + +++L+ + ++ + +N+S +T Sbjct: 127 HLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIYMNLSPKT 186 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGIT 172 ++ + ++M KL + ++++V + I+ Sbjct: 187 IEKYRASLMRKLGITNLTELVLIAIS 212 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 86.6 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 28/207 (13%), Positives = 69/207 (33%), Gaps = 38/207 (18%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKV-GNKPFKVIIDTYHNHILDE 55 + ++ + + +G L D E +++ ++++ G +P V++D + Sbjct: 7 VMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRMPRMDGI 66 Query: 56 EAIKFLEKLDAE-RIIVLAPYHIS----KLKAKAPIYFVSRKESIKNLLEIT-------- 102 + I+ L + E I+L + + ++ + + L Sbjct: 67 QLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIEKVHRGEA 126 Query: 103 ------------------YGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQ 144 G P S S + ++++L+ + I L I++ Sbjct: 127 VLDGPITLKVISELGRLSKGPAGPQPGSG-GLSEREMEVLRLVASGASNREIARALYITE 185 Query: 145 QTLKIQKFNIMYKLKLRRMSDIVTLGI 171 T+K +I+ KL R + + Sbjct: 186 GTVKNHISSILRKLGFRDRTQAALYAL 212 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 86.6 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 73/207 (35%), Gaps = 35/207 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSE--IKKVG----NKPFKVIIDTYHNHILDE 55 I L+ + G + + + +E V + P V++D + Sbjct: 5 IVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPGMNGI 64 Query: 56 EAIKFLEKLDA-ERIIVLAPYHIS----KLKAKAPIYFVSRKESIKNLLEITY-----GK 105 EA L + ++I+L+ Y FV +K S LL+ G Sbjct: 65 EATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVARGGS 124 Query: 106 HLPHKNSQ-------------------LCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 +L + S S + ++++L+ + K +I L++ QT Sbjct: 125 YLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLGLQT 184 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGITS 173 ++ + +M KL + ++ + L + + Sbjct: 185 VRSYRKTMMKKLGVNNVAGLTQLALAA 211 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 86.6 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 79/201 (39%), Gaps = 31/201 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIK-----INSLSEIKKVGNKPFKVI-IDTYHNHILDE 55 + ++ + +G ++ + IK + I + + F ++ +D + I Sbjct: 7 VLIVDDHTLFRKGLKEILLDTPYIKECKEAKSGYEAIDILSKESFDIVFLDIAMSDINGI 66 Query: 56 EAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEIT-----YGK 105 E +K ++ L E I++ + + ++++ + LL+ GK Sbjct: 67 ETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGASGYLTKSADPEELLKAVDKIIKGGK 126 Query: 106 HLPHKNS---------------QLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ 150 +LPH S S +F++ +I K K+ I+ L+IS +T+ Sbjct: 127 YLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSISIKTVSTY 186 Query: 151 KFNIMYKLKLRRMSDIVTLGI 171 + I+ KL L ++I+ I Sbjct: 187 RARILEKLGLENNAEIINYAI 207 >UniRef50_A9VYF8 Response regulator receiver n=5 Tax=Methylobacterium RepID=A9VYF8_METEP Length = 236 Score = 86.3 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 66/206 (32%), Gaps = 36/206 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSE-----IKKVGN-KPFKVIIDTYHNHILDE 55 + L+ G L I++ + + V KP VI+D + Sbjct: 10 VALIDDHPIFRSGVRGLLGETAGIEVVGEASDGRHALDLVLRTKPDVVIMDITMTGMSGL 69 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITY------- 103 + L ++ + IV + + + +V ++ + +LLE Sbjct: 70 AVARALREVGSAVHIVFLTVNEDLAFVDEALTAGAQGYVLKRSAGTSLLEAIEAVVLGGQ 129 Query: 104 ------------------GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQ 145 G PH + + + ++++LI ++ ++IS Sbjct: 130 YVDAEMRAPPAPPDRTEAGPPAPHPGQEGGLTAREREVLRLIALGMTMKEVSLAMSISAA 189 Query: 146 TLKIQKFNIMYKLKLRRMSDIVTLGI 171 ++ K KL LR + IV + Sbjct: 190 SVDTYKIRGCKKLGLRSRASIVRFAL 215 >UniRef50_UPI0001AF0F26 two-component system response regulator n=2 Tax=Streptomyces filamentosus RepID=UPI0001AF0F26 Length = 234 Score = 86.3 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 23/197 (11%), Positives = 66/197 (33%), Gaps = 33/197 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKIN-----SLSEIKKVGNKPFKVIIDTYHNHILDEE 56 + ++ D+ + G ++ ++ + I++ + ++P ++D + E Sbjct: 8 VLVVDDDALVRDGLRRILESADDIRVPAVCGPGEALALARRHRPDVALVDLHMPGTDGIE 67 Query: 57 AIKFLEK-LDAERIIVLAPY----HISKLKAKAPIYFVSRKESIKNL-----LEITYGKH 106 ++ L R+ VL + H+ + F+ + ++ L L G Sbjct: 68 VLRGLRASARPPRVAVLTGFGEDEHVRRALRAGAAGFLLKDSAVDELIPGVRLLAAGGSA 127 Query: 107 LP------------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 L + + ++++L+ + I L +S+ T++ Sbjct: 128 LSERVVRSLPDGAGKEAAPADPPGARLLTAREREVLELLPSGMSNEEIGRRLFLSRTTVR 187 Query: 149 IQKFNIMYKLKLRRMSD 165 +++ KL Sbjct: 188 DHVSSLLAKLGAANRVQ 204 >UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio RepID=C9QDP7_VIBOR Length = 209 Score = 86.3 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 63/200 (31%), Gaps = 30/200 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 + L + G + + + I ++ KP +++D ++ Sbjct: 4 LILADDHRLMQDGLKSRLEREDNLDIIACVGTGTEALEATLELKPDVLLLDINMPNLNGI 63 Query: 56 EAIKFLEKLDAERIIVLAPYHISKLK-----AKAPIYFVSRKESIKNLLEITY------G 104 E ++ L K + +++ H S+ +V + + L+ Sbjct: 64 EVLEQLAKTSSATSVIMLSMHDSRDYVVRSVKAGAKGYVLKDVGSEELVMAINQVAQGRS 123 Query: 105 KHLPH-------------KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 P + S + +++ I I +L+IS +T++ + Sbjct: 124 YLCPQASDRLLEQINEAPEEKDDTLSKRESDVLKAIANGAGNKEIADSLHISVRTVETHR 183 Query: 152 FNIMYKLKLRRMSDIVTLGI 171 I KL + +V L + Sbjct: 184 LRIKKKLGATSTAALVKLAL 203 >UniRef50_B4D2X8 Two component transcriptional regulator, LuxR family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT Length = 242 Score = 86.3 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 65/205 (31%), Gaps = 36/205 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLS-------EIKKVGNKPFKVIIDTYHNHILD 54 + L+ + +G + D + + E + N VI D Sbjct: 25 VLLVDDHPAIRRGMAAIIDEEPDLTTCGEASTAPMALEAMRRLNPDIAVI-DISMPGTNG 83 Query: 55 EEAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLL---------- 99 E IK + I++ H + +V + E+++ +L Sbjct: 84 VELIKLMLAEQPGLQILMLSMHDESVYALRALRAGAKGYVMKGEALECVLTGLRKVGEGE 143 Query: 100 -------------EITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 + + S +F++++L+ + I L++S +T Sbjct: 144 IYVSPKFSDRLIFKTIQSTIAGVASPVDKLSDREFEVLRLLGRGFGSREIAEELSLSVKT 203 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGI 171 ++ + +I KL + ++V I Sbjct: 204 VETHRAHIKEKLGFKEAGEMVRFAI 228 >UniRef50_A4CN07 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CN07_9FLAO Length = 217 Score = 86.3 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 20/199 (10%), Positives = 64/199 (32%), Gaps = 30/199 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKVII-DTYHNHILDE 55 I L+ L+G + D +++ + + + V++ D + Sbjct: 4 IALVDDHRLFLEGIRSILDREIGLEVHASVGQGVELLNLLKTTRADVVLTDIRMPGMDGL 63 Query: 56 EAIKFLEKLDAERIIVLAPY-----HISKLKAKAPIYFVSRKESIKNLLEITYG------ 104 + + + ++ + L ++ + + L++ + Sbjct: 64 SLTRQICRSFPNTRVIALTMLDHEQDVKDLLDAGARGYLVKNVEKEELVQAIHTVARGDY 123 Query: 105 -------------KHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 K + + + + ++++LI + + I +L +S+ T+ + Sbjct: 124 YLSRKFRPIYKNWKSQEPRQESVRLTRRERQVLELIAQGRTSQQIAESLKLSRFTIDTHR 183 Query: 152 FNIMYKLKLRRMSDIVTLG 170 NI K+ +R ++ Sbjct: 184 KNIHKKMGIRSNIGLLKAA 202 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 85.9 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 25/208 (12%), Positives = 64/208 (30%), Gaps = 39/208 (18%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNK-PFKVIIDTYHNHILDE 55 + + + + +G L I++ + + V K P V++D Sbjct: 1 MVVADDQAIVREGIVMLLGLLPGIEVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRCDGV 60 Query: 56 EAIKFLEKLDA-ERIIVLAPYHIS----KLKAKAPIYFVSRKESIKNLLEIT-------- 102 EA + + K +++VL + ++++ + +++ Sbjct: 61 EATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSGEA 120 Query: 103 ---------------YGKHLPHK-----NSQLCFSHNQFKIMQLILKNKNESNITSTLNI 142 + +P + + +++ LI + + I L++ Sbjct: 121 GLSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARALHV 180 Query: 143 SQQTLKIQKFNIMYKLKLRRMSDIVTLG 170 S T+K N+ K R + V Sbjct: 181 SAATVKTHINNLFAKTGARDRTQAVRYA 208 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 85.9 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 26/206 (12%), Positives = 66/206 (32%), Gaps = 35/206 (16%) Query: 2 IFLMTKDSFLLQGFWQ---LKDNHEMI-KINSLSEIKKVGNK------PFKVIIDTYHNH 51 + ++ + G L+ E++ + S + P +++D Sbjct: 9 VMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVILMDLMMPG 68 Query: 52 ILDEEAIKFLEKLDAERIIVLAP--YHISKLKAK---APIYFVSRKESIKNLLEITYGKH 106 + E + L I++ K+ + +V + S + L+ +G Sbjct: 69 MDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEELIYALHGAV 128 Query: 107 LPHK--------------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 + + + +++ LI + ++ I L+IS +T Sbjct: 129 KGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGEELHISVKT 188 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGIT 172 +K N++ K +L + + L Sbjct: 189 VKTHVSNLLMKCELEDRTQLAVLAHR 214 >UniRef50_B1ZN14 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B1ZN14_OPITP Length = 215 Score = 85.9 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 27/201 (13%), Positives = 77/201 (38%), Gaps = 31/201 (15%) Query: 2 IFLMTKDSFLLQGFWQLK---DNHEMIKINSLSEIKKVGN---KPFKVIIDTYHNHILDE 55 + ++ + + + ++ N++++ + + KP +++D + Sbjct: 4 LVIVEDQTAIREMLVEILRLDANYQLVGESGDGQSALALCLEVKPDLLVLDAKLPGLNGV 63 Query: 56 EAIKFL-EKLDAERIIVLA----PYHISKLKAKAPIYFVSRKESIKNL-----LEITYGK 105 + ++ + +KL R++V + P I ++ FV + + + G Sbjct: 64 DLLRRISKKLSGMRVLVFSGHENPVLIREMLEAGAHGFVEKTAGLFEFKKGLETVASGGT 123 Query: 106 HLP---------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ 150 + N+ + + +I+QL+ ++ + I + L IS +T+ Sbjct: 124 YFGPAVAALLRNVVANPSASNTADFLTDREREILQLVAESHSTKEIAAKLGISIKTVDNH 183 Query: 151 KFNIMYKLKLRRMSDIVTLGI 171 + N+M KL L ++ + + Sbjct: 184 RTNLMRKLNLHDVASLTRYAL 204 >UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92 Tax=Burkholderiales RepID=Q3JFS6_BURP1 Length = 282 Score = 85.9 bits (211), Expect = 6e-16, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 70/205 (34%), Gaps = 31/205 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKVGNKPFKV-IIDTYHNHILDE 55 + + + + G + N ++ + I V + P +V ++D Sbjct: 71 VLIADDHALVRDGLRHILQNASGYEVAGEAFDSATTIALVRSTPAQVLVLDLSMPGRNGV 130 Query: 56 EAIKFLEKLDAERIIVLAPYHISKLKA-----KAPIYFVSRKESIKNLL-----EITYGK 105 E IK +++ I++ H + A +++++ + L+ + G Sbjct: 131 ELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGASGYLTKESASSELVGAVTKVASGGV 190 Query: 106 HLPHKNS---------------QLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ 150 ++ + S +F + + I + + I L +S +T+ Sbjct: 191 YVSLAMAERFAQSLNEPAETLPHHRLSDREFDVFRRIASGQTLTQIADELCVSAKTVSTY 250 Query: 151 KFNIMYKLKLRRMSDIVTLGITSYF 175 K I+ K+++ + +V + Sbjct: 251 KTRILEKMQMPHEAALVRYALRHKL 275 >UniRef50_Q842F8 Response regulator, two-component system n=8 Tax=Rhodococcus RepID=Q842F8_RHOSR Length = 209 Score = 85.5 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 23/199 (11%), Positives = 74/199 (37%), Gaps = 30/199 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNK------PFKVIIDTYHNHILDE 55 + + + G ++ + + + + ++ + P V++D + Sbjct: 4 VVVCDDHGIIRSGIRRILETTTDFHLVASAPTGELLLQAVRDFAPELVVLDIRLSDCNGL 63 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITY------- 103 + ++ + + E +V+ + + K K + +++++ + L+ + Y Sbjct: 64 DLLEQISAISPETRVVMLSMYGAKGYVDKAKTRGARGYITKECLDEELVSVLYTVMKDEG 123 Query: 104 -----------GKHLPHKNSQL-CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 G + + S + ++M+LI + I L +S +T++ + Sbjct: 124 FVSFRADTTEPGGSESLLEANIDSLSSRELEVMKLIASGLTNTEIAEELTVSPRTVESHR 183 Query: 152 FNIMYKLKLRRMSDIVTLG 170 +I KL +R +++ + Sbjct: 184 ASIQRKLLIRTRAELARVA 202 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 85.5 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 26/204 (12%), Positives = 65/204 (31%), Gaps = 35/204 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL----SEIKKVGN--KPFKVIIDTYHNHILDE 55 + L +L G L + I++ SE + + P ++D + Sbjct: 7 VALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDVSMPGLNGL 66 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHL--- 107 E + + +++ H + L ++ ++ + ++LL Sbjct: 67 ELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRAVAAGGI 126 Query: 108 ---------------------PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 + S S + +++LI + + I ++S ++ Sbjct: 127 YLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRFDLSVKS 186 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLG 170 ++ K KL LR ++I+ Sbjct: 187 IETYKARAAEKLGLRTRAEIIRYA 210 >UniRef50_C6E2Z2 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter sp. M21 RepID=C6E2Z2_GEOSM Length = 215 Score = 85.5 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 77/207 (37%), Gaps = 36/207 (17%) Query: 3 FLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKVGNKPFKVIIDTYHNHILDEEA 57 LM+ + Q W L + + + + +E+++V ++I D + Sbjct: 7 ILMSDQILVRQCLWVLLEKAPELDLAAQLDFAATELEEVLELHSDLVI--IDPDSSDIDG 64 Query: 58 IKFLEKL----DAERIIVLA----PYHISKLKAKAPIYFVSRKESIKNLLEIT-----YG 104 + L + ++L+ P ++ L FV + + LL G Sbjct: 65 SDTIRSLVSGTFPAKALILSGRAEPKRVADLLNAGASGFVPKSSPVDELLWAVKAVTGNG 124 Query: 105 KHLP----------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 +LP + Q+ + + IM L+ + K+ ++ L IS +T++ Sbjct: 125 FYLPPELDAVVRRKGSTWSAAQPQQVILTPREHDIMVLLAQGKSSRAVSEQLLISVKTVE 184 Query: 149 IQKFNIMYKLKLRRMSDIVTLGITSYF 175 + +IM KL L M+ + + + F Sbjct: 185 AHRAHIMKKLGLSGMAALAKYALRAGF 211 >UniRef50_C4XSZ8 NarL family two-component response regulator n=2 Tax=Desulfovibrio RepID=C4XSZ8_DESMR Length = 226 Score = 85.5 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 26/208 (12%), Positives = 68/208 (32%), Gaps = 37/208 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSE-----IKKVGN-KPFKVIIDTYHNHILDE 55 I + + QG + ++ + + + P +++D Sbjct: 8 IAIADDHGLMRQGLAAILAADPRFEVVGEAADAAGAVGLARDLAPDVLLLDVGLAGGSGV 67 Query: 56 EAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITY------- 103 + + L E +V+ H + +V + + +L+ Sbjct: 68 DVAGRVAGLAPECRVVMVTMHARLDLVAACFRAGAMGYVVKDSAATSLVAAIEAVLRGER 127 Query: 104 -------------------GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQ 144 K P + + + +I++L+ + ++ + I + L IS+ Sbjct: 128 YLDAAITPQVLLRLDEYAARKTGPRDPAYDSLTRREQQILRLLAEGRSVAAIATELFISK 187 Query: 145 QTLKIQKFNIMYKLKLRRMSDIVTLGIT 172 +T++ + NI KL L ++++V Sbjct: 188 KTVENHRANICGKLGLANLAELVRYAAR 215 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 85.5 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 26/208 (12%), Positives = 74/208 (35%), Gaps = 39/208 (18%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL--------SEIKKVGNKPFKVIIDTYHNHIL 53 + L+ + + +G L E +++ +++ P V++D + Sbjct: 7 VLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERL--APDVVVMDINMPKLD 64 Query: 54 DEEAIKFLE-KLDAERIIVLAPY----HISKLKAKAPIYFVSRKESIKNLLEITY----- 103 A + + K++A R+++L+ Y ++ ++ + + +L+ Sbjct: 65 GVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREVAGG 124 Query: 104 -------------------GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQ 144 + + + +++ L+ + K+ I L +S Sbjct: 125 NAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILGLSV 184 Query: 145 QTLKIQKFNIMYKLKLRRMSDIVTLGIT 172 +T++ + IM KL + ++ +V I Sbjct: 185 KTIEGHRGRIMAKLGVHNVAGLVRQAIR 212 >UniRef50_B0TSG4 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=B0TSG4_SHEHH Length = 222 Score = 85.5 bits (210), Expect = 8e-16, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 78/204 (38%), Gaps = 33/204 (16%) Query: 2 IFLMTKDSFLLQGFWQLKD---NHEMIKINS---LSEIKKVGNKPFKVIIDTYHNHILDE 55 I L+ + G L + N E+IK + + ++P +I+D + Sbjct: 7 IILVDDHILVRAGIRSLLESIANVEVIKESGDGIEALSLLRTHQPTLLILDISLPGLNGL 66 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNL------------ 98 E + + K+ + I++ H ++K ++ ++ +++ L Sbjct: 67 EVARSVTKMKTKTKILMLSMHSDVEYVAKALTIGSHGYLMKESAVEELETAISTLINDKQ 126 Query: 99 ----------LEITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 ++ G + + Q +I+QLI + + I +++S +T++ Sbjct: 127 YIGKNIDLEMVDKLRGDSNQESDLIKLLTSRQRQILQLIAEGYSTREIAERMSVSIKTVE 186 Query: 149 IQKFNIMYKLKLRRMSDIVTLGIT 172 + +IM +L + ++ +V I Sbjct: 187 THRAHIMSRLNIFDIAGLVRFAIR 210 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 85.1 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 23/198 (11%), Positives = 63/198 (31%), Gaps = 28/198 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLS------EIKKVGNKPFKVIIDTYHNHILDE 55 + + + G + D I + + + E + P +++D Sbjct: 16 VVIADDHRVVRSGLRMVLDAEPDIAVVAEAGDVPSAERAVRAHHPHVLVLDLNMPGEQSL 75 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITY------- 103 AI L E +V+ + +V ++ + L++ Sbjct: 76 PAIPRLVAELPETAVVVLTMQQDPAFAREALRSGARGYVLKEAADDELVQAVRLAREGRT 135 Query: 104 ---------GKHLPHKNSQLC-FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFN 153 P + + + ++++LI + I L +S +T++ + + Sbjct: 136 YLNPELGARMAAEPPPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSIRTVESHRAH 195 Query: 154 IMYKLKLRRMSDIVTLGI 171 I K++ +++V + Sbjct: 196 IQQKVRRSSRAELVRYAL 213 >UniRef50_Q2W0D2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Rhodospirillaceae RepID=Q2W0D2_MAGSA Length = 290 Score = 85.1 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 65/209 (31%), Gaps = 50/209 (23%) Query: 2 IFLMTKDSFLLQGFWQLKDNHE--------------MIKINSLSEIKKVGNKPFKVIIDT 47 I + G + D E + + S +I V +D Sbjct: 74 ILIADDHELFRDGLRHVLDQFEGPPTIIEACDFPQAIAAVQSEKDIDIVL-------LDL 126 Query: 48 YHNHILDEEAIKFLEKLDAERI--IVLAPYHISK---------LKAKAPIYFVSRKESIK 96 + E + L++L + IVL+ + P SR Sbjct: 127 TMPGMAWTEGLAKLKELLPSTVPLIVLSASDDRRHVLQAVNMGAAGFIPKTSSSRVMLSA 186 Query: 97 NLLEITYGKHLP------------------HKNSQLCFSHNQFKIMQLILKNKNESNITS 138 L ++ G +LP +++ + Q +++ L+ + K+ I Sbjct: 187 LKLVLSGGVYLPPALLEQGGPGGDDGAPVAGESAIASLTPRQREVLALLGQGKSNKEIAR 246 Query: 139 TLNISQQTLKIQKFNIMYKLKLRRMSDIV 167 L +++ T+K+ I+ L + + V Sbjct: 247 VLELAEGTVKLHVTAILKALNVNNRTRAV 275 >UniRef50_B6JD38 Two component transcriptional regulator, LuxR family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD38_OLICO Length = 210 Score = 85.1 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 22/203 (10%), Positives = 64/203 (31%), Gaps = 32/203 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHE-----MIKINSLSEIKKVGNKPFKVII-DTYHNHILDE 55 I + + +G Q+ N + ++ P +++ D I Sbjct: 4 IIIADDHTIFREGLRQILAEANDFTLVGEATNGDDLLVRLREAPCDIVLLDLSMPGISGI 63 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYG------ 104 ++ ++ I++ H + + +V++ + L+ Sbjct: 64 TLVRAAREIAGAHRIIVLSMHEEHQYVVEALKAGADGYVTKNSASDQLIAAIRKVSQGEL 123 Query: 105 ---------------KHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 + P + + + ++ +++ S I L++S +T+ Sbjct: 124 FVSAAASQEAILREMRTSPTELPHTRLTRREREVFDMLVAGHKISRIARDLDLSIKTVST 183 Query: 150 QKFNIMYKLKLRRMSDIVTLGIT 172 K N++ K+ +D+V + Sbjct: 184 HKTNLLAKMDAETTADLVRYALR 206 >UniRef50_Q024A4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q024A4_SOLUE Length = 225 Score = 85.1 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 69/194 (35%), Gaps = 24/194 (12%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINS------LSEIKKVGNKPFKVIIDTYHNHILDE 55 + + + G + + + + + + P +++D + Sbjct: 25 VLIADDHPVVCLGLLGIINGQPDMTVVGQAKTGTEAVALARKHSPDVILMDLRMPGMSGV 84 Query: 56 EAIKFLEKLDAER-IIVLAPYH----ISKLKAKAPIYFVSRKESIKNLLEITYGK----- 105 EA + + E +IVL Y I K A ++ + S LLE Sbjct: 85 EATEVIRAERPESAVIVLTTYQGDEDIRKALAAGAQSYLLKGMSHLKLLEAIRSVRTGHT 144 Query: 106 --------HLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYK 157 +P K ++ S + I++LI++ + I LNI++ T+K I+ + Sbjct: 145 YFPRAIRNSVPGKLNRAALSPREMDILRLIVRGLSNQEIADALNITRGTVKWHVNIILRR 204 Query: 158 LKLRRMSDIVTLGI 171 L + + V + + Sbjct: 205 LDVNDRTQAVVVAV 218 >UniRef50_C7PEC4 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PEC4_CHIPD Length = 207 Score = 85.1 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 71/195 (36%), Gaps = 27/195 (13%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVG------NKPFKVIIDTYHNHILDE 55 I L + G L + I + ++ +V ++P I+D + Sbjct: 7 IILADDHTLFADGIRSLLEQTPYITVQGIASNGQVLIEMLQRHQPDLAILDISMPVLNGL 66 Query: 56 EAIKFLEKLDA-ERIIVLAPYHISKLKA----KAPIYFVSRKESIKNLLE----ITYGKH 106 E K + K R I+L+ Y L + ++ + + +LL+ + G+ Sbjct: 67 EVTKIIRKDMPHIRTIILSSYSDPHLISLSRSYGADGYLMKTCNQYDLLQTITRVVRGES 126 Query: 107 L------------PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNI 154 H + + + +I+ LI + I + L +S T++ + NI Sbjct: 127 CFPQLPRIQEAEIDHSFREFNLTRRELEILHLINQQFTNQQIATHLYLSIYTVETHRKNI 186 Query: 155 MYKLKLRRMSDIVTL 169 M KL+L+ + + Sbjct: 187 MQKLQLKSPAALTRF 201 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 85.1 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 25/204 (12%), Positives = 70/204 (34%), Gaps = 35/204 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHE-----MIKINSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 + + + + QG Q+ + + + + K P V++D Sbjct: 13 VLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMPKQNGI 72 Query: 56 EAIKFLEKLDAERIIVLAPYHISKLK-----AKAPIYFVSRKESIKNLLEITYGKH---- 106 + ++ L+ +D+ I++ +H + +V + ++L++ + Sbjct: 73 QTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDVYQGLN 132 Query: 107 --------------------LPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 +N++ + +++++ L+ + N I L IS++T Sbjct: 133 YIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCLFISEKT 192 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLG 170 +K NI K+ + + Sbjct: 193 VKNHVSNIFKKINVNDRTQAAIYA 216 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 85.1 bits (209), Expect = 9e-16, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 67/204 (32%), Gaps = 33/204 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 + ++ +G QL + I++ N +K V +P V++D + Sbjct: 30 VLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDINMPGMDGI 89 Query: 56 EAIKFL-EKLDAERIIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITYGKHLP-- 108 A + + ++ +++L Y + ++ + + LL + Sbjct: 90 RATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAIHVAAEGGA 149 Query: 109 --------------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 S + +++L+ + N I LN+++ T+K Sbjct: 150 TIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADALNLAESTVK 209 Query: 149 IQKFNIMYKLKLRRMSDIVTLGIT 172 + KL +R + V I+ Sbjct: 210 NNLSALFQKLGVRDRTQAVIYAIS 233 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 85.1 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 26/201 (12%), Positives = 69/201 (34%), Gaps = 31/201 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNH---EMIKINSLSEIKKVGN--KPFKVIIDTYHNHILDEE 56 + + + G L ++ + + ++ E ++ + P V++D + + Sbjct: 1441 VVIADDHALFRDGIKSLLESEGFQMVGEASNGQEAVELVHNLSPDLVLMDLSMPVMGGLD 1500 Query: 57 AIKFLEKLDA-ERIIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITYGKHLPHKN 111 AI+ + ++IVL K F+ + + ++ Sbjct: 1501 AIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLLRNVIRGEPA 1560 Query: 112 SQL--------------------CFSHNQFKIMQLILKNK-NESNITSTLNISQQTLKIQ 150 + + +I+QL++ + +++ L +S+ T+K Sbjct: 1561 ITPRLAGKLIDEFSRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQLGVSEHTVKYH 1620 Query: 151 KFNIMYKLKLRRMSDIVTLGI 171 NI+ KL L+ + +V + Sbjct: 1621 LRNILSKLHLQSRAQVVAWAV 1641 >UniRef50_Q2RU94 Sensor protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RU94_RHORT Length = 1483 Score = 84.7 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 74/196 (37%), Gaps = 28/196 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLS--EIKKVGNKP----FKVIIDTYHNHILDE 55 I+L+ D+ L L ++ + +K+ E +P ++ID Y + Sbjct: 1277 IYLVDDDASLRDSLRALLED-DGLKVEDYESSEAFLAAYRPGGGEACLLIDAYLPGMSGL 1335 Query: 56 EAIKFLEKLDAER-IIVLAPYHIS----KLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 + ++ L+K + IV+ Y + F+ + LL H+ Sbjct: 1336 DLLERLKKENRLLPAIVITGYSEVAMAVQAMKAGASDFIEKPVGRTELLISIDRALEQHR 1395 Query: 111 NSQ----------------LCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNI 154 S Q +IM+++L + NI + L ISQ+T++ + I Sbjct: 1396 EHGNSGKMRLWRDAAKARLASLSARQREIMEMVLAGQPSKNIAADLGISQRTVESHRALI 1455 Query: 155 MYKLKLRRMSDIVTLG 170 M KL ++ + +V L Sbjct: 1456 MKKLGVKSLPALVRLA 1471 >UniRef50_A8H3B9 Two component transcriptional regulator, LuxR family n=3 Tax=Gammaproteobacteria RepID=A8H3B9_SHEPA Length = 210 Score = 84.7 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 71/190 (37%), Gaps = 19/190 (10%) Query: 2 IFLMTKDSFLLQGFWQLKDNH---EMIKINSLSEIKKV-GNKPFKVIIDTYHNHILDEEA 57 I + + +G +L + + + I N+ I+ +P +I D + + Sbjct: 17 IIIADDHQIVSEGIARLVEKNYQVQSITTNAEELIQAAKQFQPDIIITDISMPGMQLNQT 76 Query: 58 IKFLEKLDAERIIVLAPYHISK-----LKAKAPIYFVSRKESIKNLLEITYGKHLPHK-- 110 + L++ E I+ H ++ + ++ LL+ + Sbjct: 77 LGLLKRTCKEAKIICLTMHDEAEILQAAFEYGADGYIVKHQAGFELLQALETVLAGKQYV 136 Query: 111 --------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRR 162 N + + Q I++L+ K + I +LNIS +T++ K+ ++ +L L Sbjct: 137 SAELQEKFNQKTVLTARQLDILKLLAKGMSAKKIALSLNISAKTVEYHKYKMIEQLDLDN 196 Query: 163 MSDIVTLGIT 172 S +V + Sbjct: 197 ASSLVAYAHS 206 >UniRef50_B4D4R4 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4R4_9BACT Length = 195 Score = 84.7 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 55/156 (35%), Gaps = 22/156 (14%) Query: 39 KPFKVIIDTYHNHILDEEAIKFLEK-LDAERIIVLAPYHISK----LKAKAPIYFVSRKE 93 KP V++D + E ++ L + R +V + + P FV + + Sbjct: 32 KPQLVVLDLILPELNGLEVLRALRAEMREVRCMVYSGTLDRRLIVEALQARPHGFVHKSD 91 Query: 94 SIKNLLEITY------GKHLPHKN-----------SQLCFSHNQFKIMQLILKNKNESNI 136 +K E P + + + I+Q+I + + + Sbjct: 92 PLKIFCEALRAVTEGCSYFTPFATKLMDDERHLHTAASHLTDRERAILQMIAEGMSNKEM 151 Query: 137 TSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGIT 172 ++I+ +T++ + +M KL + ++ + + Sbjct: 152 AERISIAPKTVEHHRAQVMQKLGMHDVATLTRYAVR 187 >UniRef50_Q47DK2 Two component transcriptional regulator, LuxR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47DK2_DECAR Length = 211 Score = 84.7 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 71/202 (35%), Gaps = 30/202 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKVGN-KPFKVIIDTYHNHILDE 55 I L + G + + +I + I + +P V++D Sbjct: 6 IILADDQLLIRAGIRAIVETLPGFQIEAECTDGYEAISAIQRLQPDVVLLDIAMPGPSGI 65 Query: 56 EAIKFLEKLDAE-RIIVLA----PYHISKLKAKAPIYFVSRKESIKNLLEIT----YGKH 106 E + + + D +I+VL+ P I + A ++ + + LL+ +G+ Sbjct: 66 EVARTIRQFDPNTKILVLSSVDRPEIIEQALAAGVNGYLLKDFVLAELLQALEMVLHGER 125 Query: 107 LPHKN---------------SQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 S + Q +I++L+ + I L IS +T++ + Sbjct: 126 FLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLGISPKTVEFHR 185 Query: 152 FNIMYKLKLRRMSDIVTLGITS 173 +M ++ + ++ + + + Sbjct: 186 SRLMERIGVHDVTGLTRFALQT 207 >UniRef50_B1ZT64 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B1ZT64_OPITP Length = 274 Score = 84.7 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 70/206 (33%), Gaps = 35/206 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLS------EIKKVGNKPFKVIIDTYHNHILDE 55 I+++ + G + + +++ + + + +P VI D Sbjct: 44 IYVVDDHPLMRMGLRAMINGEPDMEVIGEAADSATATAEIMKLRPDLVIADISLRGNSGI 103 Query: 56 EAIKFLEKLDAERIIVLAPYHISKLKA-----KAPIYFVSRKESIKNLLEITY------- 103 E IK ++ D +V+ + + A +V +++ +L+ Sbjct: 104 ELIKNVKAFDPGIDVVVVSMYDESIYALRVLKAGARAYVMKQDVTTRVLDAIRRARNGQL 163 Query: 104 ----------------GKHLPHKNSQLC-FSHNQFKIMQLILKNKNESNITSTLNISQQT 146 G +S + S + +I+ LI + I + L +S +T Sbjct: 164 FVSERVATQMLNRFVDGTEDGAADSPVSSLSDRELEIVNLIGEGLPTREIAAKLFLSIKT 223 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGIT 172 ++ + +I KL L + +V + Sbjct: 224 VETHRVHIKRKLNLANATQLVQFCVR 249 >UniRef50_C6X598 Two-component response regulator n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X598_FLAB3 Length = 226 Score = 84.7 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 29/208 (13%), Positives = 74/208 (35%), Gaps = 36/208 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI------NSLSEIKKVGNKPFKVIIDTYHNHILDE 55 I ++ +++G L ++ + I + ++ +++D Sbjct: 12 ILIVDDHQLMIEGLKSLLEDEDSISFVAGATTMKETLDFLAEHEIDVILMDVNMPDSSGI 71 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 E K + L ++ H ISK+ +V ++ ++ +++ H + Sbjct: 72 EITKKVRALYPHPKVIALTMHEDISIISKMIKAGASGYVLKRTNMHEVIDALKTVHQNGR 131 Query: 111 -------------------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQ 145 +++ S + ++++LI K + I L IS++ Sbjct: 132 YLSTSVQNVIMDNLMLPEDLMDAKDDNKPVLSGRELEVLKLIAKEFSNEQIGEQLFISER 191 Query: 146 TLKIQKFNIMYKLKLRRMSDIVTLGITS 173 T++ + NI K K + + ++ IT Sbjct: 192 TVEAHRRNIFMKTKTKSIVGLIKYAITE 219 >UniRef50_Q2W107 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Magnetospirillum RepID=Q2W107_MAGSA Length = 214 Score = 84.7 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 22/203 (10%), Positives = 63/203 (31%), Gaps = 33/203 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI------NSLSEIKKVGNKPFKVIIDTYHNHILDE 55 + L+ + + ++I + + P +++D + Sbjct: 5 VMLVDDHRMFREALRAPLEAESDMEIVAEANSGADTLASLDLACPDVLVLDIGLPDLNGI 64 Query: 56 EAIKFLEKLDAERIIV-LAPYHIS----KLKAKAPIYFVSRKESIKNLLEITY----GKH 106 E + + + IV L+ + ++ +V + L+ G Sbjct: 65 EVARTAIRRHPDLRIVALSGFADRIYIEEMLKAGAHGYVVKSSGADELVSAIRAVAGGSS 124 Query: 107 LPHKNS------------------QLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 + + +++ L+ + I ++L I+ T++ Sbjct: 125 FLSPEATQVMLRHIQSDADTVAPPPSVLGKREREVLVLLAGGLRSAEIAASLGIAVGTVE 184 Query: 149 IQKFNIMYKLKLRRMSDIVTLGI 171 + + NI KL + R +D++ + Sbjct: 185 VHRRNIKQKLGMNRTADLIRYAV 207 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 84.3 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 23/196 (11%), Positives = 69/196 (35%), Gaps = 26/196 (13%) Query: 2 IFLMTKDSFLLQGFWQLKDN----HEMIKINSLSEIKKVGNK--PFKVIIDTYHNHILDE 55 + ++ + +G + ++ + ++S E P +++D + Sbjct: 26 VLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNMPDVGGL 85 Query: 56 EAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITY------- 103 A + +++ E +++ H S + + +V + + + Sbjct: 86 SATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVMRGEQ 145 Query: 104 -------GKHLP-HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIM 155 G P + S+ + + I+ + + K+ + L+IS +T++ + NI Sbjct: 146 YLCTGAAGSLSPQSQTSREALTGREQTILLELAQGKSNKEVAQALDISVRTVETHRKNIK 205 Query: 156 YKLKLRRMSDIVTLGI 171 KL + + + + Sbjct: 206 RKLGISSTAGLTRYAL 221 >UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746AEC Length = 222 Score = 83.9 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 69/205 (33%), Gaps = 34/205 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI------NSLSEIKKVGNKPFKVIIDTYHNHILDE 55 + L+ +L+G+ + + +++ + + +P V+ D Sbjct: 12 VLLVDDHRMVLEGYRFMLNAQPDLEVCATAVSAAEALGLLEQVRPDLVVTDLTLGGRSGL 71 Query: 56 EAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITY------- 103 + IK + L E I++ H + +V + L Sbjct: 72 DLIKDVMALFPETKILVCSMHDEMLWANRTLQAGARGYVMKDADGPTFLTAVRTVLAGQR 131 Query: 104 --------------GKHLPHKNSQL--CFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 G+ P +S S +F++ +L + K I + LN+S +T+ Sbjct: 132 YMSSRLAASVLESFGQSKPRGSSSPIEKLSDREFEVFRLFGEGKTAKEIAAQLNLSPKTV 191 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGIT 172 + + +I KL ++++ + Sbjct: 192 SVHRDHIKEKLGFSTSAEMIRQAVR 216 >UniRef50_C7I0E4 Two component transcriptional regulator, LuxR family n=2 Tax=Thiomonas intermedia K12 RepID=C7I0E4_THIIN Length = 226 Score = 83.9 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 24/200 (12%), Positives = 75/200 (37%), Gaps = 30/200 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGN----KPFKVIIDTYHNHILDEEA 57 + ++ + L + + +++M + ++ + + V++D + Sbjct: 21 VLIIDDHALLGESLARFLGSNDMQAVWCGDLVEAMQSIRDRSWSVVLLDLSMPRGNGLDL 80 Query: 58 IKFLEKLDAERIIVLAPYHISK-----LKAKAPIYFVSRKESIKNLLEIT-----YGKHL 107 +K ++ + + +++ H + ++++ S L+E G++L Sbjct: 81 LKRIKLMHPDLPVLILSMHPEQQFALRALRGGAAGYLTKGCSPDVLVEAIQKVVHGGRYL 140 Query: 108 ----------------PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 + S + ++ +++ K+ + + L+IS +T+ K Sbjct: 141 TPGVAEQLANYMNEGEAAEEPHARLSDREMQVFMRLVEGKSVNQVADELHISCKTVSTHK 200 Query: 152 FNIMYKLKLRRMSDIVTLGI 171 +M+KL L +D+V + Sbjct: 201 TRLMHKLALDNDADLVRYAM 220 >UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT Length = 211 Score = 83.9 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 77/201 (38%), Gaps = 31/201 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFK-VIIDTYHNHILDE 55 + + + G QL + I++ N ++K+ V++D Sbjct: 5 LIVTDDHELVRAGLLQLFEGAPGIEVVGEAVNGEELMRKLQATQVDLVLLDLDMPGENGA 64 Query: 56 EAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITY-----GK 105 I+ + + + +I++ H + ++ + S K LLE + GK Sbjct: 65 NLIERIRRHYPDLLILILSAHDEIKVVSRAVQAGASGYICKDCSPKTLLEAIHKVVATGK 124 Query: 106 HL---------------PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ 150 +L NS S + +I +L+++ + +I+ L IS +T+ Sbjct: 125 YLSPLMAEELAYTSAIPQANNSLALLSSREQEIFRLLVEGLSNDDISRQLFISDRTVSAH 184 Query: 151 KFNIMYKLKLRRMSDIVTLGI 171 K N++ KL L+ + ++V I Sbjct: 185 KINLLNKLGLKNVVELVHYSI 205 >UniRef50_A8G0P8 Two component transcriptional regulator, LuxR family n=16 Tax=Gammaproteobacteria RepID=A8G0P8_SHESH Length = 209 Score = 83.9 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 70/190 (36%), Gaps = 18/190 (9%) Query: 2 IFLMTKDSFLLQGFWQLKDN--HEMIKINSLSEIKKV--GNKPFKVIIDTYHNHILDEEA 57 ++L+ D +L + + + N+ + +P VI+D+ + +E Sbjct: 7 LYLVDDDIAILDSLSFMLGQFGYNITAFNNGDDFLNTVPLERPACVILDSRMPEVSGQEV 66 Query: 58 IKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHL----- 107 + L ++D+ I+ H K F + S K L L Sbjct: 67 QQKLLEIDSPLGIIFLTGHGDMPMAVDAFRKGACDFFQKPVSGKALSCAIDKAMLYSHRT 126 Query: 108 ----PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRM 163 K S + +++ L+ K I+ L +S +T+++ + +M KL++ M Sbjct: 127 FEAQSLKRKLSTLSEREQEVLNLLTKGMTNKQISEALFLSLRTIEVHRAKVMKKLEVHNM 186 Query: 164 SDIVTLGITS 173 +++ S Sbjct: 187 AELAKYSQMS 196 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 83.6 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 25/199 (12%), Positives = 72/199 (36%), Gaps = 30/199 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNK------PFKVIIDTYHNHILDE 55 + L+ + + +G+ +L + + + + + + P V++D Sbjct: 8 VLLVDDHAVVREGYRRLLELNADVHVCGEAADAAQAYQRFCALRPDVVVMDVSLPGASGI 67 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITY------G 104 EA++ + + + +++ H + + + +V++ + L+E G Sbjct: 68 EAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGALGYVTKASAPDVLVEAVRTIARRAG 127 Query: 105 KHLPHKNSQL-------------CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 P + L S +F++++L+++ +I L +SQ+T+ + Sbjct: 128 YLSPDISQALALRNAFSEGPPGRQLSAREFEVLRLLVQGYTLPSIAEKLGLSQKTVANHQ 187 Query: 152 FNIMYKLKLRRMSDIVTLG 170 I K + + Sbjct: 188 SVIRQKFGADNGVQLAQMA 206 >UniRef50_C1XWT0 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=C1XWT0_9DEIN Length = 206 Score = 83.6 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 26/199 (13%), Positives = 65/199 (32%), Gaps = 28/199 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKVI-IDTYHNHILDE 55 +F++ +F G +++ ++ I+++ + V+ +D + Sbjct: 4 VFIVEDHAFTRDGLRVAVGREPDLQVVGEARSAEEGIEQLAHTSADVVLMDIGLPGMDGI 63 Query: 56 EAIKFLEKLDAERIIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITYGKHLPH-- 109 EA K +++ R++VL + + + + +LL + Sbjct: 64 EATKLVKERFGVRVVVLTVHQLEAEVLAAMTAGADAYCLKSTDPASLLLAIRAAAIGSTY 123 Query: 110 ----------------KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFN 153 Q S + ++++LI + + I L IS T+K Sbjct: 124 LDPQIAHIVLGQLSVLSGGQAQLSPRELEVLRLIAEGLSNKEIAQRLGISLSTVKTHIEE 183 Query: 154 IMYKLKLRRMSDIVTLGIT 172 ++ KL + + Sbjct: 184 LLAKLSASDRTQAAIKAVR 202 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 83.6 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 21/199 (10%), Positives = 63/199 (31%), Gaps = 30/199 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLS----EIKKVGNK--PFKVIIDTYHNHILDE 55 + L + + G + I++ + E K+ ++ P +++D + Sbjct: 7 VLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMPVMNGL 66 Query: 56 EAIKFLEKLDAERIIVLAPYHISKLK-----AKAPIYFVSRKESIKNLLEITY------- 103 EA + K E +++ + + ++ + S ++ Sbjct: 67 EAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISSVASGGY 126 Query: 104 -----------GKHLPHK-NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 G + + +++ I K + +L IS +T++ + Sbjct: 127 YFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLGISVRTVESHR 186 Query: 152 FNIMYKLKLRRMSDIVTLG 170 N+ K+ + + + + Sbjct: 187 LNLREKVGNKNAAQLYKVA 205 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 83.6 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 70/194 (36%), Gaps = 24/194 (12%) Query: 2 IFLMTKDSFLLQGFWQLKDNHE----MIKINSLSEIKKVG--NKPFKVIIDTYHNHILDE 55 + + + QG + + + + + ++ + ++P ++D + Sbjct: 9 VLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDLRMPEVEGV 68 Query: 56 EAIKFL-EKLDAERIIVLAPYH----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 AI + + RIIVL Y I + ++ ++ LL H HK Sbjct: 69 AAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRGHK 128 Query: 111 N-------------SQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYK 157 S S + ++++ + + + ++I L+I + T+K I+ K Sbjct: 129 YIPPDVGAKLVQRLSNPELSERELEVLRSLAQGMSNADIADALSIGEGTVKSHVNRILNK 188 Query: 158 LKLRRMSDIVTLGI 171 L + + V + + Sbjct: 189 LDVSDRTQAVIVAV 202 >UniRef50_Q39TN7 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TN7_GEOMG Length = 210 Score = 83.6 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 25/205 (12%), Positives = 72/205 (35%), Gaps = 31/205 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMI-----KINSLSEIKKVG-NKPFKVIIDTYHNHILDE 55 I + + +G Q+ + ++ + K+ N VI+D Sbjct: 5 ILVADDHAIFREGLKQVIGTTVDMSVVDEAVDGKELLNKIQANDYDMVILDITMPGRNGL 64 Query: 56 EAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITY------- 103 + + ++ + + +++ H + ++++ + LL+ + Sbjct: 65 DVLTEMKSIKPKLPVLVMSMHPEEQYALRAYKSGAAGYLNKGSASNELLDALHKISMGKK 124 Query: 104 -----------GKHLPHKNSQL--CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ 150 H L S+ ++++M +I K I + L++S +T+ Sbjct: 125 YVSSALAESLVSGLSDHNQQDLLQSLSNREYQVMSMIASGKTVGKIATELSLSVKTVSTY 184 Query: 151 KFNIMYKLKLRRMSDIVTLGITSYF 175 + +I+ KL ++ +++ I + Sbjct: 185 RAHILRKLNMKNNAELTRFVIENKL 209 >UniRef50_D2PZN7 Two component transcriptional regulator, LuxR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZN7_9ACTO Length = 242 Score = 83.6 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 39/211 (18%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKVI-IDTYHNHILDE 55 + L + L F L D+ + I + + + V+ +D + Sbjct: 18 VVLADDQALLRGAFRTLLDSTDDIAVVGEAGDGEEAVALTRRTHPDVVVMDIQMPGMDGL 77 Query: 56 EAIKFLEK---LDAERIIVLAPY----HISKLKAKAPIYFVSRKESIKNLLEITYGKH-- 106 A + L A R+++L Y ++++ F+ + L++ Sbjct: 78 TATAQICADPDLRASRVLILTTYETDEYVAQALRAGASGFIGKGIDADGLIDAVRTIADG 137 Query: 107 ------------------LPHKNSQ------LCFSHNQFKIMQLILKNKNESNITSTLNI 142 P + + + + +++ L+ + I + + Sbjct: 138 DALLSPAATRSLVARFLATPVDTAPRDVERLVALTPREREMVALVATGLSNLEIADRMYV 197 Query: 143 SQQTLKIQKFNIMYKLKLRRMSDIVTLGITS 173 S T++ M KL+ R + +V + + Sbjct: 198 SPFTVRAHVQRAMTKLEARDRAQLVAIAYRT 228 >UniRef50_C6VTJ6 Two component transcriptional regulator, LuxR family n=2 Tax=Sphingobacteriales RepID=C6VTJ6_DYAFD Length = 207 Score = 83.6 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 65/198 (32%), Gaps = 29/198 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINS------LSEIKKVGNKPFKVIIDTYHNHILDE 55 +F++ +LQG L ++ E I++ + + P +++D I Sbjct: 3 VFIIDDHPIVLQGLKNLLESREGIRVTGIFDQADSALAALDSHIPEVMLMDINLPDISGV 62 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPH- 109 + +++ E +V H I + +V + +++ Sbjct: 63 TLCQQVKQAHPEIRVVALSIHNERSVIMSMLQSGASGYVLKNAIGDDIVAALQAAMEGQI 122 Query: 110 -----------------KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKF 152 + + +I++LI + I + L IS T++ + Sbjct: 123 YLCAETQKALNEAPGTEPKEIPRLTRREKEILELIGQGYTTQQIAAELFISTHTVESHRK 182 Query: 153 NIMYKLKLRRMSDIVTLG 170 N+ K + + +V + Sbjct: 183 NLKEKFGVPNTATVVRMA 200 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 83.6 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 70/194 (36%), Gaps = 24/194 (12%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKK-VGNKPFKVIIDTYHNHILDE 55 I ++ + QG L + ++ + + I ++P I+D + Sbjct: 12 ILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLRLPRMNGV 71 Query: 56 EAIKFLEKLDA-ERIIVLAPYH----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 EAI + + RI+VL + I + ++ + +L H Sbjct: 72 EAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIRSVHAGKS 131 Query: 111 N-------------SQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYK 157 S + + +++LI++ ++ I + L+IS+ T+K N++ K Sbjct: 132 RIPTVVAERLAERMSGSELTARELDVLRLIVQGRSNREIAADLHISEATVKTHINNLLSK 191 Query: 158 LKLRRMSDIVTLGI 171 L + + T + Sbjct: 192 LGVSDRTQAATTAL 205 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 83.6 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 72/206 (34%), Gaps = 32/206 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVG-NKPFKVIIDTYHNHILDE 55 + L + G ++ ++ E IK+ N I + P ++D I Sbjct: 4 VLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPGIDGL 63 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPH- 109 E + L + +++ H + + + ++++K + + L+ H Sbjct: 64 EVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHSGSR 123 Query: 110 ----KNSQL----------------CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 + ++L S + ++++ + I + +IS +T+ Sbjct: 124 FLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISVKTVDT 183 Query: 150 QKFNIMYKLKLRRMSDIVTLGITSYF 175 + ++ KL LR +DI I + Sbjct: 184 YRARLLKKLNLRNNADISRFAIQNNL 209 >UniRef50_C6I025 Two component transcriptional regulator, LuxR family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I025_9BACT Length = 219 Score = 83.2 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 64/205 (31%), Gaps = 41/205 (20%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKK----------------VGNKPFKVII 45 +FL+ + QG I I +E + P V++ Sbjct: 4 VFLVEDHPLMRQGLVAALGQVPEIAILGEAESGEEALAALLPPEGETPPPAERTPDVVVM 63 Query: 46 DTYHNHILDEEAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLE 100 D + E + L+ + I++ H I + + + + +L+ Sbjct: 64 DIGLPGLSGIETTRRLKAARPDLRILMFTVHQLEGEIFGAFSSGADGYCLKDSELDSLIL 123 Query: 101 ITYGK--------------------HLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTL 140 P ++ S + ++++L+ + ++ +I L Sbjct: 124 GIQAVALGSLYVDPRIAHLAIRRILSSPAPETETPLSARETEVLRLLAEGQSNRDIAVAL 183 Query: 141 NISQQTLKIQKFNIMYKLKLRRMSD 165 IS T+K +I+ KL +D Sbjct: 184 GISVSTVKAHIQSILVKLSAATRAD 208 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 83.2 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 24/207 (11%), Positives = 64/207 (30%), Gaps = 37/207 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVG-NKPFKVIIDTYHNHILDE 55 + L ++ + G + I++ + I V ++P V++D + Sbjct: 4 VLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREAIDLVLSHRPDVVLLDIRMPRMDGL 63 Query: 56 EAIKFLEKLDA-ERIIVLAPY----HISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 A+ L ++ +++L + +I++ + F+ + + LL + Sbjct: 64 AAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAVAEGAA 123 Query: 111 --------------------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQ 144 + + ++ L+ + + I L + + Sbjct: 124 YLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLYLVE 183 Query: 145 QTLKIQKFNIMYKLKLRRMSDIVTLGI 171 T+K I+ +L R L Sbjct: 184 GTVKAHVSAILTRLGARNRVQAAILAH 210 >UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W2Z0_DYAFD Length = 205 Score = 83.2 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 25/195 (12%), Positives = 69/195 (35%), Gaps = 26/195 (13%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINS------LSEIKKVGNKPFKVIIDTYHNHILDE 55 I ++ +L+G L + E +++ + GN+ +D I Sbjct: 5 ILIVDDHPLVLEGLKSLLADAEGVQVVGTATNAIEAIAFLKGNEVDIAFLDINLPDISGI 64 Query: 56 EAIKFLEKLDAE-RIIVLAPYH----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLP-- 108 + K ++ E + + L+ ++ +S++ ++ + +++LE Sbjct: 65 DLCKKVKDQFPEVKTLALSTFNERAYVSRMIQNGASGYLIKSSGKEDILEAIAQVQAGGY 124 Query: 109 -------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIM 155 + + + +++ LI + I L IS T+ + N++ Sbjct: 125 FMNVQFDQVTPATAPKTVPFLTRREKEVLVLIAEGLTNPQIAEQLFISVTTVNSHRQNLL 184 Query: 156 YKLKLRRMSDIVTLG 170 K ++ + ++ L Sbjct: 185 IKFEVSNTASLIKLA 199 >UniRef50_B6IU89 Glycerol metabolism activator AgmR n=1 Tax=Rhodospirillum centenum SW RepID=B6IU89_RHOCS Length = 205 Score = 83.2 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 63/197 (31%), Gaps = 27/197 (13%) Query: 2 IFLMTKDSFLLQGFWQLKDNH----EMIKINSLSEIKKVGNKP---FKVIIDTYHNHILD 54 + + L + E++ + S+ + V++D + Sbjct: 3 LLIADDHDLLRDALRSHIERASPGTEVLGVGSVDAAVTALARHRGIELVLLDLRMPGMNG 62 Query: 55 EEAIKFLEKLDAERIIVL-----APYHISKLKAKAPIYFVSRKESIKNLLEITY------ 103 E + L + L +P + A + F+ + L+E Sbjct: 63 LEGLVRLRTSHPGVKVALMSGEASPEDVRAALAFGAVGFLPKTLPGTALVEAISRLVAGQ 122 Query: 104 -----GKHLPHKNSQL----CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNI 154 G P +SQL F+ + +++ +LK + I L++ + T+K+ + Sbjct: 123 TFVPEGAAAPEPDSQLAGGASFTRREREVLDFLLKGCSNKEIARALSLEEVTVKLHVRGL 182 Query: 155 MYKLKLRRMSDIVTLGI 171 KL + + + Sbjct: 183 CRKLGAKNRTQAAMRAV 199 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 83.2 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 64/198 (32%), Gaps = 28/198 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHE-----MIKINSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 IF++ +G + N ++K+ N P V++D + Sbjct: 3 IFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKMPNLMPDIVLMDISMPEMNGM 62 Query: 56 EAIKFLEKLDAERIIVLAPYHISKL-----KAKAPIYFVSRKESIKNLLEITYGKH---- 106 +A + + E I++ H K + + + S + H Sbjct: 63 DAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHNGGI 122 Query: 107 -------------LPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFN 153 + + + +++L+ N + L+IS +T++ + N Sbjct: 123 YYSRAISDLLVQSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRTIETHRRN 182 Query: 154 IMYKLKLRRMSDIVTLGI 171 I KL ++ + +V I Sbjct: 183 IKDKLAIKTSAGLVRYAI 200 >UniRef50_D0L5W2 Response regulator receiver n=36 Tax=Actinomycetales RepID=D0L5W2_GORB4 Length = 216 Score = 82.8 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 20/203 (9%), Positives = 61/203 (30%), Gaps = 34/203 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNK-----PFKVIIDTYHNHILDEE 56 + ++ G + + + + ++ ++ P V++D Sbjct: 8 VMVVDDHPMWRDGVARDLADEGFDVVATADGVRAATSRAAAVRPDVVLMDMQMPDGTGAT 67 Query: 57 AIKFLEKLDAERIIVLAPYHISK-----LKAKAPIYFVSRKESIKNLLEITYG------- 104 A L K+ E +++ + ++ + L+ + Sbjct: 68 ATAELLKVCPEAHVLVLSASDERDDVLDAIKAGATGYLVKSAQRSELVAAVHATADGQAV 127 Query: 105 ----------------KHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 P + + + + ++++ + K + I + L IS +T++ Sbjct: 128 FTPGLAGLVLGEYRRIARSPGPETPV-LTERETQVLREVAKGLSSRQIANRLAISPRTVE 186 Query: 149 IQKFNIMYKLKLRRMSDIVTLGI 171 + KL+L ++ I Sbjct: 187 NHVGATLRKLQLANRVELTRYAI 209 >UniRef50_D1BGN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Actinomycetales RepID=D1BGN7_SANKS Length = 258 Score = 82.8 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 66/209 (31%), Gaps = 39/209 (18%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI----NSLSEIKKVGNK--PFKVIIDTYHNHILDE 55 + L+ G + D + +++ SE ++ + P V++D + Sbjct: 36 VLLVDDQELFRSGIAVIVDAQDGLEVVGQAADGSEAVRMVDDLSPDVVLMDVRMPELDGV 95 Query: 56 EAIKFL-------EKLDAERIIVLAPYHI----SKLKAKAPIYFVSRKESIKNLLEITYG 104 EA + + + R+IVL + + + F+ + + L + Sbjct: 96 EATRQIFAPARAASRAGPVRVIVLTTFDLDDRAAAAIRYGASGFLLKDATPAMLRDAIRT 155 Query: 105 KHL----------------------PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNI 142 H P + + +++ + N + I + Sbjct: 156 VHAGNAVLAPDDLSTLLDGRFRARRPSPPGLEDLTPKEREVLAAVAAGLNNAEIARRAFV 215 Query: 143 SQQTLKIQKFNIMYKLKLRRMSDIVTLGI 171 S+ T+K ++ KL LR +V L Sbjct: 216 SESTVKTHVGAVLRKLGLRDRVQVVVLAH 244 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 82.8 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 74/198 (37%), Gaps = 28/198 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVG-NKPFKVIIDTYHNHILDE 55 + + + +G +L + +E IK+ + L +K V + P V++D + Sbjct: 6 VLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMPRMGGI 65 Query: 56 EAIKFLEKLDAERIIVLAPYHISKLKAK-----APIYFVSRKESIKNLLEITY------- 103 AIK ++++ +++ H + ++ + + L Sbjct: 66 TAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKVIKGDK 125 Query: 104 ----------GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFN 153 + + K S + ++++L+ + + I L IS++T+K N Sbjct: 126 VFPRSTENEVREVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEKTVKNHVSN 185 Query: 154 IMYKLKLRRMSDIVTLGI 171 I+ KL + + V + + Sbjct: 186 ILRKLSVNDRTQAVIVAL 203 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 82.8 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 23/209 (11%), Positives = 64/209 (30%), Gaps = 38/209 (18%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLS-------EIKKVGNKPFKVIIDTYHNHILD 54 + ++ +G + + I + + E + +P ++D + Sbjct: 12 VLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTL-QPDVTLLDIHMPVCNG 70 Query: 55 EEAIKFLEKLDAERIIVLAPYHISK-----LKAKAPIYFVSRKESIKNLLEITYGKHL-- 107 E + + + + I++ ++ +V + S + L+E + Sbjct: 71 LETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQVYEGE 130 Query: 108 -----------------------PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQ 144 P S + + +++Q + + I L IS+ Sbjct: 131 PVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARALFISE 190 Query: 145 QTLKIQKFNIMYKLKLRRMSDIVTLGITS 173 T++ +I+ KL L + + + Sbjct: 191 NTVRNHVRHILDKLHLSNRAQAAAYAVRN 219 >UniRef50_C7PGM2 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGM2_CHIPD Length = 213 Score = 82.8 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 71/198 (35%), Gaps = 29/198 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINS------LSEIKKVGNKPFKVIIDTYHNHILDE 55 I ++ +++GF L ++ + +I +K V++D Sbjct: 10 IAIVDDHPIVIEGFRSLLESSPLYEIAGCFTTGAGCMGFLQQHKADIVLLDITLPDGNGV 69 Query: 56 EAIKFLEKLDAERIIV-LAPYH----ISKLKAKAPIYFVSRKESIKNLLEITYGK----- 105 + + + ++V L+ + IS+L ++ + S K LL+ Sbjct: 70 HFCAVINEFYPDTMVVALSNLNERSIISQLFKNGAKGYLLKNISAKELLDALNTVWEGNI 129 Query: 106 -------------HLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKF 152 L + + + +I+QL+ + + + I L IS T+K + Sbjct: 130 AMSPEVKEIMQQPDLNTLQTIPELTKREKQILQLLAEGRKSAAIAEELFISPLTVKTHRA 189 Query: 153 NIMYKLKLRRMSDIVTLG 170 +++K ++ + +V Sbjct: 190 TLLHKFQVSNIVTLVNRA 207 >UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR family n=18 Tax=cellular organisms RepID=B4SLZ0_STRM5 Length = 217 Score = 82.8 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 70/196 (35%), Gaps = 25/196 (12%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 + ++ L G L +++ + I +P V++D + Sbjct: 10 VLVVDDHPLLRDGLAALLGAQPDLRLLGEAADGEEAIACYQRLQPDVVLMDLQMPRLDGV 69 Query: 56 EAIKFLEKLDA-ERIIVLAPYH----ISKLKAKAPIYFVS----RKESIKNLLEITYGKH 106 EAI + LD RIIVL Y + ++ R E + + + G+ Sbjct: 70 EAIVRIRALDPRARIIVLTTYRGDVRAVRALQAGASAYLLKDMLRHELVDTIRMVAGGRR 129 Query: 107 LPHKNS----------QLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMY 156 P + + S + ++++ + + I + IS+QT+K ++M Sbjct: 130 APIPPAVAASIAAHVVEDRLSPRETEVLRHVAGGLSNKRIGERMQISEQTVKAHMKSLMD 189 Query: 157 KLKLRRMSDIVTLGIT 172 KL + + VT + Sbjct: 190 KLGVGDRTHAVTQALR 205 >UniRef50_Q89DY0 Two-component response regulator n=1 Tax=Bradyrhizobium japonicum RepID=Q89DY0_BRAJA Length = 225 Score = 82.8 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 22/204 (10%), Positives = 68/204 (33%), Gaps = 31/204 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDN----HEMIKINSLS--EIKKVGNKPFKVIIDTYHNHILDE 55 + + G + + + + N S + ++P I+D + Sbjct: 20 FLIADDHEAVRLGLRAVLEQRADWEVVAEANDGSKALTAAIESRPHVAIVDFSMPRMTGV 79 Query: 56 EAIKFLEKLDAERIIVL------APYHISKLKAKAPIYFVSRKESIKNLLE-----ITYG 104 E + + + VL + + F+++ ++ ++LL + + Sbjct: 80 EVARRIRD-YPLQTEVLIFTVHKSGLLAQQAFEAGARAFLTKSDANRSLLAAVDALLVHK 138 Query: 105 KHL-------------PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 + + + + +++L+ + + I++ LN+S +T + + Sbjct: 139 RFCSESCRNELDHGAGGEADRGRGLTPREQLVVKLVAEGYSNKGISAILNLSVKTTEAHR 198 Query: 152 FNIMYKLKLRRMSDIVTLGITSYF 175 M KL + + +V + + Sbjct: 199 AAAMRKLDVNSTAGLVRYAVRAQL 222 >UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZEE6_9SPHI Length = 213 Score = 82.8 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 26/209 (12%), Positives = 71/209 (33%), Gaps = 35/209 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-------NSLSEIKKVGNKPFKVIIDTYHNHILD 54 +++ + + QG QL + +K+ + + + G +P V+ D + Sbjct: 4 FYIVEDHTIVRQGLKQLLAKYAEMKVLAEFGVPDQIMDNLAKGERPDIVLCDINLPGMDG 63 Query: 55 EEAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLE--------- 100 + +++ ++ I++ H + K + + L+ Sbjct: 64 LALTEKIKQKYPDQKIIILTMHQKEFYVLKAFDAGADGYFHKDTEESELIMGIKKIYNGQ 123 Query: 101 --------------ITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 + K+ K + + ++++ ++ I L IS +T Sbjct: 124 KYFCQSVSQILINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREIGDKLCISTRT 183 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 ++ + NI+ K L+ ++V I + Sbjct: 184 VENHRANILRKFGLKNTVELVKFAIENSL 212 >UniRef50_Q0S3P7 Response regulator, two-component system n=11 Tax=Actinomycetales RepID=Q0S3P7_RHOSR Length = 228 Score = 82.8 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 67/198 (33%), Gaps = 32/198 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKVGN-KPFKVIIDTYHNHILDE 55 + L+ + L QG + + +++ + VG+ P V++D + D Sbjct: 22 LVLVDDHAILRQGLRSVLEREPDLEVVGEASSMQEALAVVGDVAPDVVLMDLKLSAASDY 81 Query: 56 EAIKFLEKLDAER----IIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITYGKHL 107 E + +L A ++VL + + +V + L+ Sbjct: 82 EGLALCAQLSAADGTMGLLVLTTFLDEQLVVRAIHAGARGYVVKDVDTTELVRAIRAVSR 141 Query: 108 PHKNSQL------------------CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 + + +++QL+ K + + I L IS T+K Sbjct: 142 GESAFDSRSASAVIRSLNGQTTPRDGLTERELEVLQLLAKGLSNAKIGERLFISATTVKF 201 Query: 150 QKFNIMYKLKLRRMSDIV 167 NIM KL + R ++ V Sbjct: 202 HVSNIMRKLDVGRRAEAV 219 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 82.4 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 26/206 (12%), Positives = 63/206 (30%), Gaps = 32/206 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 + L+ + G + I++ + ++ P +++D + Sbjct: 4 VLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGMDGI 63 Query: 56 EAIKFL-EKLDAERIIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 EA K + +L +IIVL + + + ++ + + + Sbjct: 64 EATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASKGEP 123 Query: 111 N---------------------SQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 + + +I+ LI + K I L I+ +T+K Sbjct: 124 KLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITIKTVKT 183 Query: 150 QKFNIMYKLKLRRMSDIVTLGITSYF 175 NI+ KL + + ++ Sbjct: 184 HITNILSKLDVSDRTQAAVYAHRNHL 209 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 82.4 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 20/198 (10%), Positives = 61/198 (30%), Gaps = 30/198 (15%) Query: 3 FLMTKDSFLLQGFWQLKDN----HEMIKINSLSEIKKVGNK--PFKVIIDTYHNHILDEE 56 L + G + + + E + + P +++D + E Sbjct: 1 MLADDHELVRDGIRARLQKVADLEVVGEATNGREALTLAHDLRPDVLLMDVSMPVMNGLE 60 Query: 57 AIKFLEKLDAERIIVLA-----PYHISKLKAKAPIYFVSRKESIKNLLEIT-----YGKH 106 A + KL E +++ P ++ + ++ + S ++ G + Sbjct: 61 AATQMRKLLPEIAVLILSVYDNPEYVRGVVQAGARGYILKDISAAEMITAITSVASGGYY 120 Query: 107 LPHK--------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKF 152 + + +++ I + + + L IS +T++ + Sbjct: 121 FSSAVGPTLVGAGTSAPVEDPYGLTDRERQVLTAIARGQPNKEVAKELGISVRTVESHRL 180 Query: 153 NIMYKLKLRRMSDIVTLG 170 N+ K+ + + + + Sbjct: 181 NLREKVGNKNAAQLYKVA 198 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 82.4 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 76/202 (37%), Gaps = 32/202 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKVII-DTYHNHILDE 55 I + + L +G ++ E+I++ N ++ V K V++ D Sbjct: 4 IAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVKDGI 63 Query: 56 EAIKFLEKLDAERIIVLAPYHISKLKA-----KAPIYFVSRKESIKNLLEIT-----YGK 105 EA + L+ I++ H + A F+S+ ++ LL+ + Sbjct: 64 EATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHEGQR 123 Query: 106 HLPHKNSQL----------------CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 +LP K + S +F++M + + I L IS +T+ Sbjct: 124 YLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISVKTVDT 183 Query: 150 QKFNIMYKLKLRRMSDIVTLGI 171 + +++ KL+LR SDI I Sbjct: 184 HRSHVLKKLELRNNSDITRFAI 205 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 82.4 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 74/208 (35%), Gaps = 34/208 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI----NSLSEIKKVGN-KPFKVIIDTYHNHILDEE 56 + L+ D + + L + H++ + N +K + KP +++D + + Sbjct: 11 LLLVDDDPLVRRSLRMLFELHDINVVGEASNGEEALKAIARLKPTMILMDVNMPKMDGIQ 70 Query: 57 AIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHL---- 107 A+K ++ + +++ H + + +V + + L+E+ Sbjct: 71 ALKAIKTNYPDIQVIILTVHNQHEKVVQAIRDGCSAYVLKDSPPEQLIEVVESVAEGRYF 130 Query: 108 --------------------PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 H + + + +++QLI+ + I LNI+ +T+ Sbjct: 131 VDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGLSNKEIAGKLNITLRTV 190 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGITSYF 175 K +I+ KL + + L I Sbjct: 191 KAHVSSILMKLNVNDRTQAAVLAIQENL 218 >UniRef50_B4DAD9 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAD9_9BACT Length = 237 Score = 82.4 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 70/209 (33%), Gaps = 42/209 (20%) Query: 2 IFLMTKDSFLLQGFWQLKDNHE-----MIKINSLSEIKKVGNKPFK-VIIDTYHNHILDE 55 + + +L G+ + + + N+ ++ + V++D Sbjct: 18 LLFVDDHPVVLDGYSLMLKSQPDLDICGLATNAGDAVQLFEKEHPDLVVMDLNLPGRSGL 77 Query: 56 EAIKFLEKLDAERIIVLAPYHISKLKA-----KAPIYFVSRKESIKNLLEITY------- 103 + +K L L+ +++ H L A +V++ S LL Sbjct: 78 DLVKDLLALEPSARVLVCSMHDEMLYAERSLRAGAKGYVTKDCSAALLLTAIRRVLGGNI 137 Query: 104 --------------------GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNIS 143 G H P + S +F++ L + K I + LN+S Sbjct: 138 HVSERLAVRVLEAFAGARPRGSHSPLEK----LSDREFEVFVLFGEGKTAKEIGAKLNLS 193 Query: 144 QQTLKIQKFNIMYKLKLRRMSDIVTLGIT 172 +T+ + + +I K++ ++++ + Sbjct: 194 PKTVSVHRDHIKQKMEFGTSAEMIRQAVR 222 >UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomycetales RepID=D0LE76_GORB4 Length = 228 Score = 82.4 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 67/202 (33%), Gaps = 33/202 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI----NSLSEI--KKVGNKPFKVIIDTYHNHILDE 55 + L+ + G ++ + I SE+ + P V++D ++ Sbjct: 16 VLLVDDQELIRTGLRRILRVRDGFHIVGECADGSEVPAAVAEHSPDVVVMDLRMRNVDGI 75 Query: 56 EAIKFLEKL-DAERIIVLAPYHISKLKA----KAPIYFVSRKESIKNLLEITY------- 103 A L L D ++VL + KL + F+ + ++L+ Sbjct: 76 TATSMLAALNDPPPVLVLTTFDDDKLLSGALRAGAAGFILKDSPAESLIWAVRAVVRDGA 135 Query: 104 ---------------GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 + + + +++L+ + + + I + L IS+ T+K Sbjct: 136 FLDPAVTGRVLTGYRRSTTGDIATPDELTERETDVLRLVARGRTNAEIAAGLGISEVTVK 195 Query: 149 IQKFNIMYKLKLRRMSDIVTLG 170 +I KL LR + + Sbjct: 196 SHINHIFTKLDLRDRAAAIVYA 217 >UniRef50_C7LQH4 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQH4_DESBD Length = 222 Score = 82.0 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 23/208 (11%), Positives = 60/208 (28%), Gaps = 37/208 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKVGN-KPFKVIIDTYHNHILDE 55 I ++ G D + + ++ P +ID Sbjct: 7 ILIIDDHPLYRDGLRARLDTRPDLCVVGEAGTCAEGLRLTQTLAPDLAVIDISLPDGSGI 66 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 E + + + +++ H I+ ++S++ + +L+ + Sbjct: 67 ELTREIRLARPDLPVLIVSMHAKLDFIAAAFQAGASGYMSKESGGEGILQAIETVLSGGQ 126 Query: 111 NSQLCFSH--------------------------NQFKIMQLILKNKNESNITSTLNISQ 144 S + ++M+L+ + I + L +S+ Sbjct: 127 YLDGSLSPSVLRRLSDISGRKAKTVDASYGSLSLREQQVMRLLAEGLTPEEIAAKLFVSR 186 Query: 145 QTLKIQKFNIMYKLKLRRMSDIVTLGIT 172 +T+ ++ IM KL ++ V Sbjct: 187 KTVLNHRYAIMTKLGIKSPVAFVRHAAR 214 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 82.0 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 70/209 (33%), Gaps = 35/209 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINS------LSEIKKVGNKPFKVIIDTYHN-HILD 54 + + + + + + + +++ + + N+P V++D Sbjct: 3 LLIADDHAVVRSALKFMINAQKDMEVIGDAADGTEAFLFIESNRPDIVLMDLSMPPGENG 62 Query: 55 EEAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITYG----- 104 K + + E ++L H + ++ + S + LL+ Sbjct: 63 LLTTKRITEAFPETKVILLTMHDEEAYITQALQAGAQGYIMKNSSEELLLDAIRSVMGGQ 122 Query: 105 ------------------KHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 + +N S + +I+ LI I L IS +T Sbjct: 123 IIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFISAKT 182 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 +++ K +IM KL++++ SD++ + Sbjct: 183 VEVHKSHIMKKLEMKKFSDLLRFCVKEQL 211 >UniRef50_A6BYP5 Response regulator receiver domain protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BYP5_9PLAN Length = 221 Score = 82.0 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 80/204 (39%), Gaps = 34/204 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKK------VGNKPFKVIIDTYHNHILDE 55 + ++ + +G+ +L ++ + +++ ++ K + N P +I+D Sbjct: 11 VMIVDDHPIVREGYSRLIEHQDDLQVCGEADSKVDAIRKIMENPPDLIIVDISLKDGSGL 70 Query: 56 EAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITY------- 103 E IK ++ ++ ++ H + + +V+++++ + L++ Y Sbjct: 71 ELIKDVKAQFSQIKMLTVSMHDETLFAERSLRAGALGYVNKQQAPEQLIKAIYQVLKGKV 130 Query: 104 ---------------GKHLPHKNSQL-CFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 G S + S + ++ + I + + +I LN+S +T+ Sbjct: 131 YLSAAVTERMICRSIGSDNYSDQSPIESLSDRELEVFEQIGEGETTRSIAQKLNLSSKTV 190 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGI 171 + + NI +KL L + + I Sbjct: 191 ETYRENIKHKLNLENATALTRHAI 214 >UniRef50_C5T9P3 Two component transcriptional regulator, LuxR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9P3_ACIDE Length = 239 Score = 82.0 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 21/198 (10%), Positives = 61/198 (30%), Gaps = 28/198 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLS----EIKKVGNK--PFKVIIDTYHNHILDE 55 I L+ + G + E I + + E + + P V+ D Sbjct: 7 ILLVDDHPLVRDGVRMRLEATEHICVAGEAASVGESLPLAHALAPDIVLTDIRMPAASGI 66 Query: 56 EAIKFLEKLDAERIIVLAPYHI-----SKLKAKAPIYFVSRKESIKNLLEITYGKHLP-- 108 + +++ H + + +V + + L+E H Sbjct: 67 HLAAVFREQFPRVRVLVLSMHDDAEYVRRAVSLGARGYVLKDAPAQQLIEAIEAVHQGGC 126 Query: 109 ---------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFN 153 S + + ++Q + + ++ I + + S +T++ + + Sbjct: 127 YFSPGLEQLLDDAGSVARSNRSLTPREASVLQWVSEGRSNKEIAALMGTSVRTVETHRLH 186 Query: 154 IMYKLKLRRMSDIVTLGI 171 + KL++ + ++ + Sbjct: 187 LRRKLRIEGQAALMKYAV 204 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 82.0 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 24/204 (11%), Positives = 63/204 (30%), Gaps = 33/204 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKVGN-KPFKVIIDTYHNHILDE 55 + + + QG + E I++ ++ +P +++D + Sbjct: 10 VLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMPGVDGV 69 Query: 56 EAIKFLEKL-DAERIIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 A++ L + R++V+ + + +V + L H H Sbjct: 70 GAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSVHAGHV 129 Query: 111 ----------------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 + + +++ LI + + I L ++++T+K Sbjct: 130 LLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLAEKTVK 189 Query: 149 IQKFNIMYKLKLRRMSDIVTLGIT 172 NI+ KL + + + Sbjct: 190 THVSNILMKLGVADRTQAALWAVR 213 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 82.0 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 26/206 (12%), Positives = 65/206 (31%), Gaps = 37/206 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGN------KPFKVIIDTYHNHILDE 55 + ++ S + QG + + +++ +E KV +P V++D + Sbjct: 11 LLIVDDQSLIRQGLKAMLEQEPDLEVVGDAENGKVALELVAELQPDVVLMDIRMPEMDGR 70 Query: 56 EAIKFLEKLDAE-RIIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 A K + + +++VL+ + ++ + L + H + Sbjct: 71 TATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIRFGHSGYT 130 Query: 111 NSQLCF--------------------------SHNQFKIMQLILKNKNESNITSTLNISQ 144 + + +++ LI I L I++ Sbjct: 131 QFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIAQQLYITE 190 Query: 145 QTLKIQKFNIMYKLKLRRMSDIVTLG 170 T+K +I+ +L L+ S + Sbjct: 191 GTVKTHVTSILSRLNLKNRSQLAIYA 216 >UniRef50_B9JLI1 Two-component response regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLI1_AGRRK Length = 219 Score = 82.0 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 25/206 (12%), Positives = 64/206 (31%), Gaps = 36/206 (17%) Query: 3 FLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKV-IIDTYHNHILDEE 56 + + + +G L + I N + + V + + I+D + + Sbjct: 8 IIADDHAIVREGLKLLISAMTNVSIVAEAANGDTLLDLVRSTRADLLILDLGMPGVAGIQ 67 Query: 57 AIKFLEKLDAERIIVLAPYHI-----SKLKAKAPIYFVSR-------------KESIKNL 98 I + L I++ +I ++++ +S K Sbjct: 68 FISDIRALAPRMKILVLTANIEPRTVRAALDAGANGYLTKDGDPEELDTAIDAVKSGKTY 127 Query: 99 LEITYGKHLPHKN------------SQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 L + + S + + + +++ L + + + L IS T Sbjct: 128 LAKSIRFAVADPERLGKMPVTGEIVSPIPLTLRERQVLLLSAQGQTSRQMAERLGISPLT 187 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGIT 172 + + N+M KL L +++ + Sbjct: 188 ARKHRENLMRKLNLHSTAEVTAYAVR 213 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 82.0 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 33/202 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 + L + L QG L + N L ++K +P +ID + Sbjct: 4 VMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRPQVAVIDISMPELNGM 63 Query: 56 EAIKFLEKLDAERIIVLAPYHISKLK-----AKAPIYFVSRKESIKNLLEITY------G 104 E +K + E I++ H + ++ + + + L++ Sbjct: 64 EVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALATGKT 123 Query: 105 KHLPHKNSQLC----------------FSHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 + + S L + + ++ L++ K +I TL+IS +T + Sbjct: 124 YYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISVKTAE 183 Query: 149 IQKFNIMYKLKLRRMSDIVTLG 170 + ++ KL + +++V Sbjct: 184 NHRGKVLDKLGVSNTAELVRYA 205 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 82.0 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 36/206 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFK-VIIDTYHNHILDE 55 I L + L G L + +++ + I +V + V++D + Sbjct: 7 IVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPKLNGV 66 Query: 56 EAIKFLEKLDAERIIVLAPYHI-----SKLKAKAPIYFVSRKESIKNLLEITYGKH---- 106 + I+ L K A+ I++ H + +V +K + LL Sbjct: 67 DCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTVARGEM 126 Query: 107 -------------------LPHKNSQL--CFSHNQFKIMQLILKNKNESNITSTLNISQQ 145 P K S+ S + ++++ + +I L++S + Sbjct: 127 FIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLLHVSVK 186 Query: 146 TLKIQKFNIMYKLKLRRMSDIVTLGI 171 T++ K +M KL++ + +++V + Sbjct: 187 TVETYKARVMEKLEMHKRAELVRYAM 212 >UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR family n=16 Tax=Proteobacteria RepID=B2JVJ8_BURP8 Length = 219 Score = 81.6 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 69/202 (34%), Gaps = 32/202 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNK------PFKVIIDTYHNHILDE 55 + L+ + +G QL + ++ + +VG P V+ID + Sbjct: 7 VLLIDDHALFRKGVAQLIQMNPAFRVVGEASSGRVGVDLAVRLKPDVVLIDLNMPDMNGI 66 Query: 56 EAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSR----KESIKNLLEITYGKH 106 E ++ + + + ++ + ++ + +E NL + G Sbjct: 67 ETLEMMRQHGVDARFLMLTVSDNERDVVAALRAGASGYLLKDMEPEELCLNLQKALQGTA 126 Query: 107 L-----------------PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 + P +Q S + +++ +++ I L+IS T+K+ Sbjct: 127 VLSEAVTGKLFHALSAGQPLPANQSNLSVREQEVLDYLVEGMCNKEIARKLDISVGTVKV 186 Query: 150 QKFNIMYKLKLRRMSDIVTLGI 171 ++++KL L + V Sbjct: 187 HVKHLLHKLDLHSRVEAVVWHH 208 >UniRef50_Q1J2K9 Two component transcriptional regulator, LuxR family n=2 Tax=Deinococcus RepID=Q1J2K9_DEIGD Length = 209 Score = 81.6 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 64/200 (32%), Gaps = 28/200 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKV-IIDTYHNHILDE 55 I ++ +F G + +++ + ++ + + V I+D + Sbjct: 7 ILIVEDHAFTRDGLRASLNLEADLRVVAEARSGEEALEVLRGQAADVAIVDIGLPGMDGI 66 Query: 56 EAIKFLEKLDAERIIVLAPYHISKL-----KAKAPIYFVSRKESIKNLLEITYGKH---- 106 +A + L++ E IV+ H + A + + LL Sbjct: 67 QAARELKRRWPELRIVMLTAHDLREEVFASLASGADAYCLKSARPDLLLLAVRAAAAGSA 126 Query: 107 -------------LPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFN 153 + ++ + + +++LI I + L IS T+K+ Sbjct: 127 YLDPQVAHHVLGGVRAPDAGAPLTPRELDVLRLIADGLANKEIAAALEISVSTVKLHVQE 186 Query: 154 IMYKLKLRRMSDIVTLGITS 173 I+ KL+ + + + Sbjct: 187 ILVKLQAADRTQAAVKALRA 206 >UniRef50_UPI0001969032 hypothetical protein BACCELL_01743 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001969032 Length = 215 Score = 81.6 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 74/198 (37%), Gaps = 26/198 (13%) Query: 2 IFLMTKDSFLLQGFWQLKDN----HEMIKINSLSEIKKVG--NKPFKVIIDTYHNHILDE 55 + L+ +L G + + E+ +S ++ ++ + ++D + Sbjct: 13 LLLIDDHPIVLAGIRNILEVCPEIGEIYAADSAAKALELLKSHDISICMVDIELPDMSGF 72 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYG------ 104 E I+ + L + I++ H + ++ + ++ +NL E Y Sbjct: 73 ELIEQIRLLYPDMRIIIETMHSEVWIVRRMVKADVDAVILKQSDPENLQEAIYSVLSGRK 132 Query: 105 KHLPH---------KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIM 155 PH S + ++++ I + + I + L IS T++ + IM Sbjct: 133 YFCPHFRKCLRKLPPEMPQVLSKREQEVLKCISEGLKSNEIATKLYISVNTVEFHRKQIM 192 Query: 156 YKLKLRRMSDIVTLGITS 173 KL+ + SD++ I S Sbjct: 193 LKLEAKNASDMLIKAIKS 210 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 81.6 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 28/206 (13%), Positives = 73/206 (35%), Gaps = 32/206 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEI-KKVGNK-----PFKVIIDTYHNHILDE 55 I ++ +FL + ++ + + + V K P +++D Sbjct: 7 ILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRPDCILMDINLPGKNGI 66 Query: 56 EAIKFLEKLDAE-RIIVLAPY----HISKLKAKAPIYFVSRKESIKNLLEIT-------- 102 EA + ++K R++V Y ++ ++ + S + ++ Sbjct: 67 EATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIRMLYRGDS 126 Query: 103 -------------YGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 + + + ++++ + + +I+ ++K + I L IS +T+KI Sbjct: 127 VIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALYISDKTVKI 186 Query: 150 QKFNIMYKLKLRRMSDIVTLGITSYF 175 I KL ++ S V + + Sbjct: 187 HINKIFKKLNVKSRSQAVIYAVRNQL 212 >UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC81D Length = 209 Score = 81.6 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 70/198 (35%), Gaps = 29/198 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKVGN-KPFKVIIDTYHNHILDE 55 + L + QG Q+ + + I + + I V P +++D + Sbjct: 5 VVLADDHVLMRQGVSQMLNANPDISVVGECDDGVALIAAVLKLSPDVILMDISMPRMSGL 64 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLP-- 108 AI + ++ I++ H I ++ ++ ++ S ++L+E Sbjct: 65 VAIDKILSQRSDAKILVLSMHNEVEYIEAMRDAGAKGYILKESSGESLVEAIKKVAANKT 124 Query: 109 ----------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKF 152 H + + + ++ L++ I L++S +T + + Sbjct: 125 CFPDELTQSSSDQCQKHVSPLSVLTRREREVFFLVVAGNTSKKIAELLDMSLKTAENHRS 184 Query: 153 NIMYKLKLRRMSDIVTLG 170 NI KL L ++++ + Sbjct: 185 NIYKKLNLSSSAELIRMA 202 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 81.6 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 66/201 (32%), Gaps = 34/201 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKV--GNKPFKVIIDTYHNHILD 54 +F++ + G Q H+ I++ ++++ + V +D Sbjct: 38 VFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPALHPHVAV-LDGRLPDGSG 96 Query: 55 EEAIKFLEKLDAERI-IVLAPYHISKLK----AKAPIYFVSRKESIKNLLEITYG----- 104 + + + + ++L Y + +V ++ +L+ Sbjct: 97 IDVCREVRSALPDVACLILTSYDDDEALFSAIMAGAAGYVLKEIRGNDLVGAIRTVASGQ 156 Query: 105 ---------------KHLPHKN-SQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 + P ++ + + + +I+QLI I + L +S++T+K Sbjct: 157 SLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTRLGLSEKTVK 216 Query: 149 IQKFNIMYKLKLRRMSDIVTL 169 +I+ KL L + Sbjct: 217 NYVSSILEKLGLASRTQAAVY 237 >UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMB6_ACAM1 Length = 215 Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 68/206 (33%), Gaps = 36/206 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHE-----MIKINSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 I L+ + +G L + E + N IK+ + KP +++D + Sbjct: 5 ILLVDDQYLIREGIASLLELEEDLEVAGMAANGKEAIKQAIDLKPNIILMDIRMPELNGV 64 Query: 56 EAIKFLEKLDAE-RIIVLAPYHIS----KLKAKAPIYFVSRKESIKNLLEIT-------- 102 EA +++ +II+L + + ++ + +L + Sbjct: 65 EATAKIKQSLPHCQIIMLTTFDDEELIVQSLLAGACGYLMKDIPPDDLGQAIKLADAGVF 124 Query: 103 -----------------YGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQ 145 P + + + ++++L+ K I N+S+ Sbjct: 125 QLAPEVAGKLIGSLKTQRAGDAPKLPTDTPLTTRELEVLKLLAKGNTNKEIAKAFNLSEG 184 Query: 146 TLKIQKFNIMYKLKLRRMSDIVTLGI 171 T+K NI+ +L LR + + Sbjct: 185 TVKNHVSNILMRLGLRDRTQAAVYAV 210 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 28/206 (13%), Positives = 68/206 (33%), Gaps = 34/206 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 I + + + +G L + ++ N L+ I+ KP +++D + Sbjct: 8 ILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDLSMPKMNGL 67 Query: 56 EAIKFLEKLDAERIIVLAPYHISK-----LKAKAPIYFVSRKESIKNLLEITYGKHLP-- 108 ++ L+K E I++ H S+ + ++ + + + L Sbjct: 68 ATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIRAIMDGKA 127 Query: 109 ---------------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 + + + ++ QL+ + I L IS +T+ Sbjct: 128 YLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLFISPKTV 187 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGITS 173 + N+M KL L ++ + + Sbjct: 188 DKHRTNLMKKLDLHSAREVSNFALKN 213 >UniRef50_C9M9U6 Response regulator GacA n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9U6_9BACT Length = 217 Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 27/210 (12%), Positives = 64/210 (30%), Gaps = 36/210 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKV-IIDTYHNHILDE 55 + L+ + G ++ + +++ + S + V + V ++D I Sbjct: 4 LVLIDDHRMFIAGLMEIFASRPDLQVVGSAPDGESGLAVVREQRPDVAVLDMTMPSIGGV 63 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHL--- 107 E + L + E I+ H IS+L ++ + + LL Sbjct: 64 ECARRLVESFPETKILALSMHNDLRFISELLRIGAKGYLLKDCATDELLTAVRTVAEGRL 123 Query: 108 ----------------------PHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQ 145 + S + ++ L+ + I L IS+ Sbjct: 124 YLAGGVVQLLVEDYLRLKRAVHDGPARSMVLSEREKSVLALMAQGLTSKAIGDELGISKN 183 Query: 146 TLKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 T+ + +M KL +++++ Sbjct: 184 TVDTHRRRMMDKLGCNSVAELLRHAYREEL 213 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 76/199 (38%), Gaps = 28/199 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMI----KINSLSEIKKVGN--KPFKVIIDTYHNHILDE 55 + ++ + G L + + + + E ++ + +P V++D + Sbjct: 22 VLVVDDHPPMRVGLVALIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLRMPGMGGV 81 Query: 56 EAIKFLEKLDAE-RIIVLAPYH----ISKLKAKAPIYFVSRK---ESIKNLLEITYGKHL 107 EAI + K E R+IVL+ Y I + ++ + E I + + Y Sbjct: 82 EAILAIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRAVYAGDT 141 Query: 108 PHKNSQL----------CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYK 157 S + + +++ ++K ++ I S+L IS+ T+K + K Sbjct: 142 SLPRSVAERLTERAQREQLTERERDVLESLIKGRSNKEIASSLCISEDTVKSHLKTLFAK 201 Query: 158 LKLRRMS----DIVTLGIT 172 L++R + + + GI Sbjct: 202 LRVRDRTGAAIEAIRHGIV 220 >UniRef50_Q0K3Q8 Response regulator, NarL-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K3Q8_RALEH Length = 219 Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 24/196 (12%), Positives = 60/196 (30%), Gaps = 25/196 (12%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKVGNKPFKV-IIDTYHNHILDE 55 + L + +L+G Q+ + + + + P + ++D + Sbjct: 10 VALADDHAIVLEGLKQVLSGVGNLVLAGEAADGAQLLGLLERVPTDLLVMDLGMPGVDGL 69 Query: 56 EAIKFLEKLDAERIIVLAPYHI-----SKLKAKAPIYFVSRKESIKNLLEIT-------- 102 ++ L I++ ++ + I L+ Sbjct: 70 AFVERLRTRHPALRILVLTGSAGAGMAHAAIDAGANGYLVKSGDISELVPALMALREGRN 129 Query: 103 ------YGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMY 156 + + + +I+ LI + +I + L+IS T + + N+M Sbjct: 130 FVAARATAPATAAPDGIATLTRRELQILMLIARGATAGDIAAQLDISPLTARKHRENLMR 189 Query: 157 KLKLRRMSDIVTLGIT 172 KL L +++V Sbjct: 190 KLDLHNTAEVVAYAAR 205 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 70/206 (33%), Gaps = 37/206 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLS-------EIKKVGNKPFKVIIDTYHNHILD 54 + L + +G +L + + + E+ + V++D + Sbjct: 9 VLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDV-VVMDIAMPRLNG 67 Query: 55 EEAIKFLEKLDAER-IIVLAPY----HISKLKAKAPIYFVSRKESIKNLLEITYGKHLPH 109 EA K +++L I++L Y +I + F+ + LLE + Sbjct: 68 IEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAIRAVYAGE 127 Query: 110 K------------------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQ 145 ++ + + +++++ + + +I L +S + Sbjct: 128 SVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIADQLYLSNR 187 Query: 146 TLKIQKFNIMYKLKLRRMSDIVTLGI 171 T++ NI KL + ++ + G+ Sbjct: 188 TIQTHLSNIFKKLSVGSRTEAILYGL 213 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 71/205 (34%), Gaps = 35/205 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 + L + +G +N E I+I + + KV P V++D + Sbjct: 21 VLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSKVRELSPEIVLMDLDMPTMSGL 80 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKH---- 106 EA K + + +++ H + ++ +V + + L+ H Sbjct: 81 EATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIESVHGGGA 140 Query: 107 ------------------LPHKNSQLC--FSHNQFKIMQLILKNKNESNITSTLNISQQT 146 + S ++ + +++ +I + ++ + S + + +T Sbjct: 141 FFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRMGVGVRT 200 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGI 171 ++ + +M KL + ++ + I Sbjct: 201 VETHRERVMNKLDIHNVAGLTKYAI 225 >UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP Length = 235 Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 74/201 (36%), Gaps = 31/201 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHE----MIKINSL-SEIKKVGNKPFKV-IIDTYHNHILDE 55 I ++ + +G ++ + + + +S ++ + ++P + I+D + Sbjct: 15 ILIVDDHVIVREGLQRILEATGAGWVVAEASSGFQALEVMRHQPIDLAIVDLSMPGMNGL 74 Query: 56 EAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITY-----GK 105 + IK + +++ H + +V++ + L+ G Sbjct: 75 DLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGANGYVTKDGASAELVNAVRKVATGGA 134 Query: 106 HLPHK---------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ 150 ++ S + ++++ I+ + ++I L++S +T+ Sbjct: 135 YVTASLAERVVLQLNGATTAPGHAQLSDRELEVLRRIVAGERITDIAEALHLSVKTVSTH 194 Query: 151 KFNIMYKLKLRRMSDIVTLGI 171 K I KL+L M+ ++ G+ Sbjct: 195 KSRIQEKLQLPTMAALIRYGM 215 >UniRef50_C6WIC9 Two component transcriptional regulator, LuxR family n=31 Tax=Actinobacteria (class) RepID=C6WIC9_ACTMD Length = 302 Score = 81.6 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 73/206 (35%), Gaps = 34/206 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSE------IKKVGNKPFKVIIDTYHNHILDE 55 + + + L F L + +++ +E +P V++D ++ Sbjct: 73 VVIADDQALLRGSFEVLVGSAPDLRVLGTAEDGERAVAVAARVRPDVVLMDVRMPNVDGI 132 Query: 56 EAIKFLEKLDA-ERIIVLAPY----HISKLKAKAPIYFVSRKESIKNLLEITY----GKH 106 EA + A R+++L + ++ F+ + +LL G+ Sbjct: 133 EATARICAAQAGVRVLILTTFDLDEYVYAALRAGASGFLLKDTPPADLLAAIRVVASGEA 192 Query: 107 LPHKNSQLCF-------------------SHNQFKIMQLILKNKNESNITSTLNISQQTL 147 L + + + ++++L+ + + + IT L++S+ TL Sbjct: 193 LLSPSVTRRLITEFAARPAARPLPALDAVTAREREVLRLVAEGLSNTEITEALHVSRGTL 252 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGITS 173 K +++KL R + +V S Sbjct: 253 KTHVGRLLHKLGARDRAQLVIAAYES 278 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 81.3 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 72/200 (36%), Gaps = 30/200 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSE------IKKVGNKPFKVIIDTYHNHILDE 55 + L+ + +G E +I +E +P V++D + Sbjct: 17 LLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKMDGI 76 Query: 56 EAIKFLEKLDA-ERIIVLAPYH----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 EA K +++ D +I++L+ + + + ++ + L+ + + Sbjct: 77 EATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIYEGNA 136 Query: 111 NSQL-------------------CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 N + + +++Q I K ++ I + L+I++QT+K Sbjct: 137 NFHPKVTPALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQTVKTHV 196 Query: 152 FNIMYKLKLRRMSDIVTLGI 171 NI+ KL++ + + Sbjct: 197 SNILAKLEVDDRTQAALYAV 216 >UniRef50_Q12FM5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=Q12FM5_POLSJ Length = 224 Score = 81.3 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 67/203 (33%), Gaps = 33/203 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMI----KINSLSEIKKVGNK--PFKVIIDTYHNHILDE 55 I ++ + +G + + + + S+ E V P IID N Sbjct: 16 IMMVDDHPLVREGMARFLNLQGDLDLCCEAGSVEEALAVVADCNPALAIIDISLNGESGL 75 Query: 56 EAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITYGKHLP-- 108 E IK L + ++ H + ++ +KE+ N+L Sbjct: 76 ELIKTLRRRYPGLALLAISMHDESVFAERALRAGANGYLMKKEATGNILLAVRRVLAGDI 135 Query: 109 --------------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 + S +F+I+ L+ + LN S +T++ Sbjct: 136 YLSAAMHSRLSQRLLAPQAGAPSPIAGLSEREFEILHLLGLGFGTRQVADKLNRSIKTIE 195 Query: 149 IQKFNIMYKLKLRRMSDIVTLGI 171 + ++ KL+L+ +D+V I Sbjct: 196 THRASLKEKLQLKSGADLVRFAI 218 >UniRef50_B1ZWL0 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZWL0_OPITP Length = 234 Score = 81.3 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 68/204 (33%), Gaps = 34/204 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSE-----IKKVGNKPFKV-IIDTYHNHILDE 55 +FL+ QG L + + + ++ I + V ++D Sbjct: 22 VFLVDDHPITRQGVAVLINQERDLMVCGEADSAPVAIDLIQKLSPDVALVDITLKTTSGI 81 Query: 56 EAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLL----------- 99 E +K L+ L E +++ H + ++ + E+ +L Sbjct: 82 ELMKHLKALRPEMPVLIMSMHDESLFAERALRAGAKGYIMKHEASAKILTAIRRVLSGEL 141 Query: 100 ------------EITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 + + S S + ++ QLI I S LN+S +T+ Sbjct: 142 YLSDKMKEKMLHRLVNNRKEEVVFSIDTLSDREMEVFQLIGNGYGTRQIASKLNLSVKTI 201 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGI 171 + ++ KL+L +++V I Sbjct: 202 DSYREHLKLKLRLESGTELVRHAI 225 >UniRef50_A8L345 Two component transcriptional regulator, LuxR family n=33 Tax=Bacteria RepID=A8L345_FRASN Length = 249 Score = 81.3 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 25/206 (12%), Positives = 59/206 (28%), Gaps = 37/206 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMI-----KINSLSEIKKVGNKPFKVI-IDTYHNHILDE 55 + + + G + D I ++ ++ V ID + Sbjct: 25 VVVADDQEIVRTGLRMILDAQPGIVVVGVAVDGRRAVELARRLRPDVCLIDIRMPVMDGI 84 Query: 56 EAIKFLE---KLDAERIIVLAPY----HISKLKAKAPIYFVSRKESIKNLLEITYGKHL- 107 +A L D ++V+ + ++ F+ + L + + Sbjct: 85 QATLALAGPGVADPLAVVVITTFDLDEYVYAALRAGARGFLLKDAGPDLLAQAVHAAACG 144 Query: 108 ----------------------PHKNSQL-CFSHNQFKIMQLILKNKNESNITSTLNISQ 144 P + + + +++ + + S I + L+IS Sbjct: 145 DALIAPNVTARLLATFAGSGPAPVPAQPVEALTDREEQVLATVAGGRTNSEIAADLHISL 204 Query: 145 QTLKIQKFNIMYKLKLRRMSDIVTLG 170 T+K ++M KL R +I Sbjct: 205 STVKTHIASLMAKLGARNRVEIALWA 230 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 81.3 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 75/202 (37%), Gaps = 32/202 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 I ++ + +G + + E + + + +++ + KP V++D Sbjct: 4 ILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGTDGV 63 Query: 56 EAIKFLEKLDAE-RIIVLAPYH----ISKLKAKAPIYFVSRKESIKNLLEITY------- 103 +AI+ ++++D R++VL Y I + ++ + +++ Sbjct: 64 QAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYRGGS 123 Query: 104 --------------GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 G L + + + + ++ L+ + I L+I+++T+K Sbjct: 124 LLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERTVKF 183 Query: 150 QKFNIMYKLKLRRMSDIVTLGI 171 I KL + ++ V+ I Sbjct: 184 HANAIYRKLDVSGRTEAVSKAI 205 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 81.3 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 66/209 (31%), Gaps = 35/209 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGN------KPFKVIIDTYHNHILDE 55 + ++ +G L I++ + G P V++D Sbjct: 1 MLVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGI 60 Query: 56 EAIKFLEKLDAERIIVLAPYHISKL-----KAKAPIYFVSRKESIKNLLEITY----GKH 106 EA +++ I++ + ++ + SI+ + + G+ Sbjct: 61 EACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQS 120 Query: 107 LPHKNSQLCF--------------------SHNQFKIMQLILKNKNESNITSTLNISQQT 146 L + + + + ++++L+ K N I L IS+ T Sbjct: 121 LISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISENT 180 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 +K NI+ KL+L + V + Sbjct: 181 VKNHVRNILEKLQLHSRMEAVMYAVKEKL 209 >UniRef50_Q0AL13 Two component transcriptional regulator, LuxR family n=1 Tax=Maricaulis maris MCS10 RepID=Q0AL13_MARMM Length = 201 Score = 81.3 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 72/197 (36%), Gaps = 23/197 (11%) Query: 2 IFLMTKDSFLLQGFWQLK----DNHEMIKINSLSEIKKVG---NKPFKVIIDTYHNHILD 54 I + +L L + E+ + S +E+++ N+ V++D I Sbjct: 3 ILIADDHDLVLDAVRALLENDIPDAEVELVRSGNEVERSLSDGNRYDLVLLDLRMPGIAG 62 Query: 55 EEAIKFLEKLDAERIIVL-----APYHISKLKAKAPIYFVSRKESIKNLLEITY------ 103 + ++ L K A++ + + +P + L F+ + L+ Sbjct: 63 VQDVRDLMKRHADQPVAILSGMASPMEVQMLLENGARGFIPKTMPADGLVAAVRLILAGQ 122 Query: 104 -----GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKL 158 +N + + +++ + + + I +L I + T+K+ ++ KL Sbjct: 123 VFSPIHHTTDPENEPASLTPREREVLFCLQRGEANKEIARSLEIQETTVKLHLRSLSLKL 182 Query: 159 KLRRMSDIVTLGITSYF 175 R +++V I + F Sbjct: 183 DARNRTEVVVKAIQAGF 199 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 81.3 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 70/205 (34%), Gaps = 33/205 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKVGNK-PFKVIIDTYHNHILDE 55 + ++ + L +G L ++ + +++ + K P V++D Sbjct: 5 VLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDKQGH 64 Query: 56 EAIKFLEKLDAERIIVLAPYHI----SKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK- 110 E IK L++ + R++ L + ++ ++ +K + L+ + Sbjct: 65 EIIKELKESCSARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSVYQGEVI 124 Query: 111 ----------------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 S + +++QLI I L IS +T++ Sbjct: 125 VDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYISIKTVE 184 Query: 149 IQKFNIMYKLKLRRMSDIVTLGITS 173 I KL L R S++V + + Sbjct: 185 THIARIKEKLGLNRRSELVRYAMRN 209 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 81.3 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 66/209 (31%), Gaps = 35/209 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKVI-IDTYHNHILDE 55 + + + +G ++ I + N + P ++ +D + Sbjct: 7 LLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINMPIMNGI 66 Query: 56 EAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITYGKHLP-- 108 EA + ++KL+ I+ H +L +V + L++ G Sbjct: 67 EACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILGVAQGES 126 Query: 109 ----------------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 + L + + ++++ + K ++ I + L IS++T Sbjct: 127 FIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANALYISEKT 186 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 +K NI K+ + + I Sbjct: 187 VKNHLTNIFQKIGVADRTQAALYAIKEKL 215 >UniRef50_A1TUY1 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=A1TUY1_ACIAC Length = 219 Score = 80.9 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 21/195 (10%), Positives = 65/195 (33%), Gaps = 25/195 (12%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNK------PFKVIIDTYHNHILDE 55 +FL+ + + G + + I + + P V++D + Sbjct: 15 LFLVDDHALVRDGLRARLGSLPWVAIVGEASGAEEAGPLIARLAPGIVLMDVGMKDVSGL 74 Query: 56 EAIKFLEKLDAERIIVLA-----PYHISKLKAKAPIYFVSR--------------KESIK 96 + L D +++ P ++ + +V + Sbjct: 75 DFAARLLAGDGAPRVLMLSMYDNPEYVQRALQVGASGYVLKDAPASELVAALEAVAAGGT 134 Query: 97 NLLEITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMY 156 L + ++ + + + +I+ + + + I L +S +T++ + NI Sbjct: 135 FLSPAVSQRLFRNQAPKPLLTPRESEILAALGRGASSKQIACDLGLSVRTVEAHRQNIRR 194 Query: 157 KLKLRRMSDIVTLGI 171 +L+L +++++ + Sbjct: 195 RLELGSLAELIRYAV 209 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 80.9 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 24/198 (12%), Positives = 62/198 (31%), Gaps = 32/198 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKVI-IDTYHNHILDE 55 + L +L G L D+ + + + + + G + V+ +D I Sbjct: 10 VLLADDHRLVLDGLSALIDSVDGLTVVGEATSGEQAVDLAGTEHPDVVLMDIEMPGIGGV 69 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGK----- 105 EA + + +V+ + + ++ + K+++ Sbjct: 70 EATRRITTAQPTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRTIGAVARGDA 129 Query: 106 ---------------HLPHKNSQ-LCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 P +N+ + + +++ L+ S I L ++ +T+ Sbjct: 130 VFGPDVAHRVLRTFTSPPAENAPFPELTEREREVLSLLANGWPNSRIARHLQLTPKTVAN 189 Query: 150 QKFNIMYKLKLRRMSDIV 167 NI+ KL + + Sbjct: 190 NVSNILAKLHAPDRTAAI 207 >UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ Length = 207 Score = 80.9 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 25/200 (12%), Positives = 62/200 (31%), Gaps = 29/200 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKVGNKPFKV-IIDTYHNHILDE 55 + L+ + G L + +++ ++ + V I+D Sbjct: 4 VVLVEDHLLVRSGLRHLLEARGPVRVVGEAGSCREALELLEKVQADVAILDVSLPDGTGI 63 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEIT------YG 104 + L + E ++ H + +VS+ + LL+ Sbjct: 64 ALCQRLRERFPELRLLALSMHEDLEYVRGFLQAGGQGYVSKAAVDQELLDAVLAVARGER 123 Query: 105 KHLPH------------KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKF 152 P + S + ++++L+ + + + L IS++T+ + Sbjct: 124 YLNPALAMRLAMELVRESAEEAPLSPREEEVLRLLAQGLSHKEVAEKLGISEKTVATYRE 183 Query: 153 NIMYKLKLRRMSDIVTLGIT 172 M KL L S+++ Sbjct: 184 RGMEKLGLASRSELLRYAAR 203 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 80.9 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 35/201 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 + + + L +G +L + I++ + + V KP V++D + Sbjct: 6 VLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMPRLTGV 65 Query: 56 EAIKFLEKLDAER-IIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITY------- 103 EA K ++K + I++L Y + L ++ + ++ Sbjct: 66 EATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRAIKAGES 125 Query: 104 -----------------GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 K + S + +I+QL K + I L +S +T Sbjct: 126 VLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKLTLSMRT 185 Query: 147 LKIQKFNIMYKLKLRRMSDIV 167 +K NI K++ ++ + Sbjct: 186 VKAHLSNIFNKMRCSCRTEAI 206 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 80.9 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 21/202 (10%), Positives = 60/202 (29%), Gaps = 32/202 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLS-EIKKVGN---------KPFKVIIDTYHNH 51 + L+ F+ G + + I++ + + + P V+ D Sbjct: 7 LILVDDHPFVRDGVRMRLEATDDIRVVGEAGSVDEAMQLATDLGDERAPHIVLTDISMRG 66 Query: 52 ILDEEAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKH 106 + E + +++ H + + +V + + L+ H Sbjct: 67 MSGIELAALFQHRFPGIDVLVLSMHNNLEYVKRAIESGAKGYVLKDAPAQELVNAIRAVH 126 Query: 107 LP-----------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 + + + + + I L++S +T++ Sbjct: 127 AGETFFSPELQQYTEGFRASSGGNSPLTPKESATLAWLACGYSNKQIARELSMSVRTVET 186 Query: 150 QKFNIMYKLKLRRMSDIVTLGI 171 + N+ KL++ +++V I Sbjct: 187 HRLNLRRKLRITGQAELVKYAI 208 >UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC-HTH domains) n=7 Tax=Bacteria RepID=B3DW63_METI4 Length = 243 Score = 80.9 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 72/207 (34%), Gaps = 38/207 (18%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI--------NSLSEIKKVGNKPFKVIIDTYHNHIL 53 + ++ + L +G QL ++ + + I+K P V++D Sbjct: 21 VLIVDDHAILREGLIQLINSTPGLSVCGAAKNAHEGFELIEKTM--PDVVLVDISLPGKS 78 Query: 54 DEEAIKFLEKLDAERIIVLAPYHISKLKA-----KAPIYFVSRKESIKNLLEITY----- 103 E IK + + +++ H L A ++ + E + L+ Sbjct: 79 GLELIKDIHAAYPDIALLVLSMHEESLYAERVLRAGARGYLMKNEGGQKLIAAIQKVLAG 138 Query: 104 -----------------GKHLPHKNSQL-CFSHNQFKIMQLILKNKNESNITSTLNISQQ 145 GK S + S +F++ QLI K I L++S + Sbjct: 139 GISVSERVANRILQGVSGKRKALSISPIEALSDREFEVFQLIGKGYGSRQIAEQLSLSVK 198 Query: 146 TLKIQKFNIMYKLKLRRMSDIVTLGIT 172 T++ + +I KL L+ +V I+ Sbjct: 199 TVEAYRASIKQKLYLKSGPQLVHYAIS 225 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 80.9 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 77/205 (37%), Gaps = 31/205 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKVII-DTYHNHILDE 55 + + + L +G Q+ E I++ N+ IK G K V++ D Sbjct: 9 VVIADDHAILREGLKQILAETEDIEVVADAKNAAEAIKLAGTKGLDVVVLDISLPDRSGI 68 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYG-----K 105 EA ++K +++ H + + ++S++ + L+ K Sbjct: 69 EACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAIRTVAKGKK 128 Query: 106 HLPHKNS---------------QLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ 150 ++ + + S+ +F+ + +I + S I L++S +T+ + Sbjct: 129 YISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSLSVKTVSMY 188 Query: 151 KFNIMYKLKLRRMSDIVTLGITSYF 175 + ++ KL LR +++ I + Sbjct: 189 RARLLEKLNLRHNAELTHYAIKNNL 213 >UniRef50_B8GUD1 Two component transcriptional regulator, LuxR family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUD1_THISH Length = 227 Score = 80.9 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 24/204 (11%), Positives = 66/204 (32%), Gaps = 34/204 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI----NSLSEIKKVGNK-PFKVIIDTYHNHILDEE 56 + L+ + +G +L H + + + + I + P +++D + E Sbjct: 5 VLLIDDHTLFREGLQELLKRHGIDTVGAVGDGETGIDLARDLLPDVILLDMRMPAMNGLE 64 Query: 57 AIKFLEKLDAERIIVLAPYHISK-----LKAKAPIYFVSRKESIKNLLEIT--------- 102 ++ L + + IV+ + ++ ++ +L++ Sbjct: 65 VLRRLRQAGLKMPIVMLTTSTEEQDLVECLRNGAQGYLLKEMEPGDLVDALEEILQGKTV 124 Query: 103 ---------------YGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 + + + +I+ L+ + ++ I L IS T+ Sbjct: 125 VAPDLAQLLVRVVQGKSSSANEPSPFDELTPREGEILALLAEGQSNKVIARNLGISDGTV 184 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGI 171 K+ I+ KL + + L + Sbjct: 185 KLHVKAILRKLGVHSRVEAAVLAV 208 >UniRef50_B6INK4 Glycerol metabolism activator AgmR n=3 Tax=Rhodospirillaceae RepID=B6INK4_RHOCS Length = 214 Score = 80.9 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 71/206 (34%), Gaps = 39/206 (18%) Query: 1 MIFLMTKDSFLLQG-----FWQLKDNHEMIKINSLSEIKKV--GNKPFKVI-IDTYHNHI 52 M L+ D L + QL + + + E+ ++ G++ F +I +D Sbjct: 1 MNILIGDDHLLFREGLCRLLTQLDADANFFEAGTFDEVMELCQGDQDFDLILMDLQMPSW 60 Query: 53 LDEEAIKFLEKLDAERIIVL-----APYHISKLKAKAPIYFVSRKESIKNLLEITY---- 103 I+ + ++ A +V+ + + ++ + S+K +L Sbjct: 61 PGFPGIQQICEIQAGTPVVIVSASESQSDVRAALDAGASGYIPKSSSVKIMLSALNLVFS 120 Query: 104 -GKHLPHKN---------------------SQLCFSHNQFKIMQLILKNKNESNITSTLN 141 G ++P + Q +++ + + K+ I L Sbjct: 121 GGIYVPPAAIQGEGQSSGSAAQGGGHASGPGMPALTQRQRDVLRCLREGKSNKQIAYELG 180 Query: 142 ISQQTLKIQKFNIMYKLKLRRMSDIV 167 +S+ T+KI +M L +R + V Sbjct: 181 LSEGTVKIHVTAVMRSLGVRNRTQAV 206 >UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=29 Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD Length = 261 Score = 80.9 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 26/210 (12%), Positives = 65/210 (30%), Gaps = 38/210 (18%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEI------KKVGNKPFKVIIDTYHNHILDE 55 + ++ + GF + +++ +++ + + + +P V++D Sbjct: 45 VLIVDDQDLVRNGFKLILSSYDHVRVVGEASNGIEAYEQSLALRPQVVLMDIRMPVEDGI 104 Query: 56 EAIKFL---EKLDAERIIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITYGKHLP 108 A + + L R++VL + I + F+ + +++ Sbjct: 105 AATRKIVGDTALAQTRVLVLTTFDIDEYVYDALQAGASGFMLKDAEPDDIVRAVRTVAAG 164 Query: 109 HKNSQLC-------------------------FSHNQFKIMQLILKNKNESNITSTLNIS 143 Q + + +I++ + + + I L IS Sbjct: 165 DALIQPSITRRLIETFVSSRPRTSAAAGGLVDLTDREREILRFVARGMSNEEIADDLVIS 224 Query: 144 QQTLKIQKFNIMYKLKLRRMSDIVTLGITS 173 T+K IM KL + +V S Sbjct: 225 PATVKTHLARIMGKLDAHDRAQLVVAAYES 254 >UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR8_DESMR Length = 220 Score = 80.9 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 69/205 (33%), Gaps = 34/205 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHE-----MIKINSLSEIKKVGNKPFKV-IIDTYHNHILDE 55 I L + L G L DN + + + V P +V ++D + Sbjct: 6 IILADDHTVLRTGLRLLIDNQPDFTVVGEAADGEALLALVERVPAEVLVLDLSMPRVSGL 65 Query: 56 EAIKFLEKLDAERIIVLAPYH----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLP--- 108 E IK L+ E I++ H + + A + ++ ++ L Sbjct: 66 ECIKELKSRGQEIKILVLTMHGREYVKEAMAAGALGYIEKQALDSELFVAIRTVASGRRY 125 Query: 109 ---------------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 + + + ++++L+++ + I L++S +T+ Sbjct: 126 MSPDNAEVLLDQLLSPTPQAASPDPYAVLTAREREVLKLLVRGHTLTQIAGLLHLSVKTI 185 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGIT 172 K ++M KL L S +V + Sbjct: 186 DTHKTHVMEKLNLTHKSQLVDYALR 210 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 80.5 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 71/205 (34%), Gaps = 36/205 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL----SEIKKVG--NKPFKVIIDTYHNHILDE 55 I + S + +G ++ + +++ E ++ +P +I+D + Sbjct: 9 ILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDINMPGLNGI 68 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGK----- 105 EA K + + + I+ H I +L +V + S + L++ Y Sbjct: 69 EATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAVYQVARGAR 128 Query: 106 -------------------HLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 P S + + + +I+ + K+ I L IS++T Sbjct: 129 VIHPGVAQKVIGCIQKQKPFTPAPVS-IPLTAREREILIHVSLGKSNREIARELFISEKT 187 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGI 171 +K +I +K+ + + + Sbjct: 188 VKNHLTHIFHKIGVSDRTQAALYAL 212 >UniRef50_Q3JL34 DNA-binding response regulator n=30 Tax=pseudomallei group RepID=Q3JL34_BURP1 Length = 223 Score = 80.5 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 23/203 (11%), Positives = 65/203 (32%), Gaps = 32/203 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNH-EMIKINSLSEIKKVGNK-----PFKVIIDTYHNHILDE 55 + ++ + G + I ++ +++ + ++ P V++D Sbjct: 10 VLVVDSHPIVRDGIEVVLGKAYAGIDVDGAADMAEASDRCGRDRPDLVLLDVMLPGEDPL 69 Query: 56 EAIKFLEKLDAERIIVLAPYHISKLKAK-----APIYFVSRKESIKNLLEITYGKHLPHK 110 A+ + + V+ S+ +A ++ + S +++ Sbjct: 70 PAMGEILRAHPGLRFVVFTALGSEARAADAIRFGASGYLLKWCSPDGIVQAIRRVMAGRV 129 Query: 111 NSQLCF---------------------SHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 + + + ++++LI I S LNIS +T+ Sbjct: 130 HIDPSLDEARVASAAGGRTLASPVDELTRREKQVLKLIADGMRNREIASLLNISPKTVDC 189 Query: 150 QKFNIMYKLKLRRMSDIVTLGIT 172 + +M KL R ++ ++ Sbjct: 190 HRQRLMQKLGARNVATVIHWAYR 212 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 80.5 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 26/206 (12%), Positives = 64/206 (31%), Gaps = 36/206 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKVII-DTYHNHILDE 55 I L+ G + + + S I+ +II D + Sbjct: 5 IMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPGLDGI 64 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITY------- 103 E + +++ + I++ + + + +V ++ L+ Sbjct: 65 EVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVMNGEH 124 Query: 104 ------------------GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQ 145 P N + S + ++++ I + I++ L IS + Sbjct: 125 YIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELFISIK 184 Query: 146 TLKIQKFNIMYKLKLRRMSDIVTLGI 171 T+ K +M K+ ++ S +V + Sbjct: 185 TVDTYKKRVMEKIGSKKKSALVRYAL 210 >UniRef50_B1ZU87 Two component transcriptional regulator, LuxR family n=4 Tax=Verrucomicrobia RepID=B1ZU87_OPITP Length = 212 Score = 80.5 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 76/194 (39%), Gaps = 23/194 (11%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKV-GNKPFKVIIDTYHNHILDE 55 I L+ + G + +++ N I+ ++P V++D + + Sbjct: 12 ILLVDDHMVMRMGLVTATSDEPDMEVVADVENGAEAIEAYRAHRPDVVVLDLRMHGMSGV 71 Query: 56 EAIKFLE-KLDAERIIVLAPYH----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 +AI+ L + R++V + Y + + FV ++ +++ LLE H + Sbjct: 72 DAIRALRSEFGNVRVLVYSNYAAGEEVYQALKAGASGFVVKEMALERLLEAIRKVHAGEQ 131 Query: 111 NSQL------------CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKL 158 S + +++L+ K ++ I + L++ + T KI NI+ KL Sbjct: 132 YVPPEIAMRMGERLMAQLSPRELDVLKLVAKGRSNKEIAAELHVVEGTAKIHVANILTKL 191 Query: 159 KLRRMSDIVTLGIT 172 + + + + + Sbjct: 192 GVSDRTQAIVVAVR 205 >UniRef50_C5C3G8 Two component transcriptional regulator, LuxR family n=6 Tax=Actinomycetales RepID=C5C3G8_BEUC1 Length = 208 Score = 80.5 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 22/192 (11%), Positives = 70/192 (36%), Gaps = 26/192 (13%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKK------VGNKPFKVIIDTYHNHILDE 55 + ++ + +G + D +++ + + +P ++D Sbjct: 5 VMIVDDHEVVRRGIADMVDAAGDLRVVAEAGSVADAVRRGTLTRPEVALVDLQLPDGTGI 64 Query: 56 EAIKFLEKLDAE-RIIVLAPYHISKLKAK----APIYFVSRKESIKNLLEITYGKHLP-- 108 E I+ L ++ R +VL + A +V + ++++ Sbjct: 65 EVIRRLADESSDTRCVVLTSFDDDDALASAIEVGARAYVLKTVRGAEIVDVVRAVAAGRV 124 Query: 109 -------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIM 155 H++ + ++ ++++L+ + +I L ++++T+K +++ Sbjct: 125 LLDERSLTRRRAAHEDPTSALTPSERRVLELVAEGLTNRDIAERLGVAEKTVKNHVTSML 184 Query: 156 YKLKLRRMSDIV 167 K+ L+R + V Sbjct: 185 SKMGLQRRTQAV 196 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 80.5 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 67/207 (32%), Gaps = 38/207 (18%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLS-------EIKKVGNKPFKVIIDTYHNHILD 54 + L + G L + I + + E+ + +P ++D Sbjct: 8 VLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELARTL-QPDVAVLDISMPG-NG 65 Query: 55 EEAIKFLEKLD-AERIIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEIT------- 102 EA++ + L R ++L + + + +V + +L+E Sbjct: 66 LEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIRLVARGE 125 Query: 103 -----------------YGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQ 145 + + ++ S + ++++L I L +S + Sbjct: 126 VFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQLFLSPK 185 Query: 146 TLKIQKFNIMYKLKLRRMSDIVTLGIT 172 T++ + +M KL R S++V + Sbjct: 186 TVETYRHRVMQKLGFSRRSELVRFALR 212 >UniRef50_D2Q428 Two component transcriptional regulator, LuxR family n=9 Tax=Actinobacteria (class) RepID=D2Q428_9ACTO Length = 213 Score = 80.5 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 21/203 (10%), Positives = 59/203 (29%), Gaps = 35/203 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIK-----KVGNKPFKVIIDTYHNHILDEE 56 + ++ G + + +++ V +P V++D + E Sbjct: 6 VVVVDDHDMFRAGVRSEIG-ASVDIVGEGADVDSAVKAIVAAEPDVVLLDVHLPGGGGTE 64 Query: 57 AIKFLEKLDAERIIVLAPYHISKL-----KAKAPIYFVSRKESIKNLLEITYGKH----- 106 +K + + E + + +V++ S L++ Sbjct: 65 VMKQVHQRHPEVKFLALSVSDAAEDVIGVIRAGARGYVTKNISGTELVDAIGRVADGDAV 124 Query: 107 -------------------LPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 S + ++++LI + + L IS +T+ Sbjct: 125 FSPRLAGFVLDAFSGAIDIASVDEDLDRLSQREREVLRLIARGYAYKEVARELFISVKTV 184 Query: 148 KIQKFNIMYKLKLRRMSDIVTLG 170 + +++ KL+L ++ Sbjct: 185 ETHVSSVLRKLQLSNRHELTRWA 207 >UniRef50_B8ET67 Two component transcriptional regulator, LuxR family n=12 Tax=Proteobacteria RepID=B8ET67_METSB Length = 223 Score = 80.1 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 75/201 (37%), Gaps = 30/201 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHE----MIKINSLSEIKKVGNK--PFKVIIDTYHNHILDE 55 I L+ + + +G+ L + + +E ++ + P VI+D + Sbjct: 7 ILLVDDHAIVREGYRALLQQQPRLKVVAEAGDGAEAYRLFKQVKPDLVIMDLTMPGLGGV 66 Query: 56 EAIKFLEKLDAERIIVLAPYHISKLKA-----KAPIYFVSR------------------- 91 EA+K + + D I++ H + A +V++ Sbjct: 67 EAVKRIRQWDPAARILVFTMHQNAAFAVQAIRAGAKGYVTKSSPPEALIRGAFDVLQGRI 126 Query: 92 KESIKNLLEITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 S E+ + + + +F+I++L+L K+ I + L +S +T+ + Sbjct: 127 ALSADIDHELALSRVTETPTATDVLTPREFEILRLLLAEKSTEAIAAILGLSPKTVANTR 186 Query: 152 FNIMYKLKLRRMSDIVTLGIT 172 + I KL + ++V + + Sbjct: 187 YLIKAKLGVASDIELVLVALR 207 >UniRef50_A7HS72 Two component transcriptional regulator, LuxR family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HS72_PARL1 Length = 213 Score = 80.1 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 75/205 (36%), Gaps = 32/205 (15%) Query: 3 FLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGN-KPFKVIIDTYHNHILDEE 56 +L+ L Q ++ + E I + ++ S I ++ N KP I+D + Sbjct: 7 YLIDDHHVLRQAVVEMLEAEEDISVIGQSGDARSGIGEIANLKPDVAILDLKMPGMTGLA 66 Query: 57 AIKFLEKLDAERIIVLAPYHISKLK-----AKAPIYFVSRKESIKNLLEITY-----GKH 106 AI + + + I++ + + +V + S ++LL G + Sbjct: 67 AIGEILRAAPKTGIIIFTMYDNPAYVWETTNAGASGYVLKSASKEDLLRAVRAVHAGGGY 126 Query: 107 LPHKNSQL----------------CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ 150 L + ++ + + ++++ + ++ I TL+I++ T+K Sbjct: 127 LQAEVTKPLLRRLAQDARTSGQKATLTSRELQVLECLADGQSNKMIAQTLSITEDTVKAH 186 Query: 151 KFNIMYKLKLRRMSDIVTLGITSYF 175 ++ KL + V + + Sbjct: 187 LKSLYEKLGASDRAHAVAISLRQQL 211 >UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ASJ5_PELPD Length = 208 Score = 80.1 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 25/196 (12%), Positives = 78/196 (39%), Gaps = 26/196 (13%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNK-----PFKVIIDTYHNHILDEE 56 I + + + +G + ++ MI + + ++ P V++D + + Sbjct: 5 ILIADDHAIVREGLTMILESSGMIVAGEARDGRDALSQTEVLRPDVVVMDIAMPELNGID 64 Query: 57 AIKFLE-KLDAERIIVLAPYHIS----KLKAKAPIYFVSRKESIKNLLEITY-------- 103 A + + +L ++IVL+ ++ + ++ ++ + L++ Sbjct: 65 ATRMIHGRLPEVKVIVLSMHNTREHVFRAMQAGARAYLLKESAGSGLVDAVRAVIRGECY 124 Query: 104 ---GKHLPHKNSQL-----CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIM 155 G P + S + +++QL+++ + + I L++S ++++ + +M Sbjct: 125 FGEGVDAPQAVAGFKSPLDSLSLREREVIQLVVEGRTSAEIAELLSLSPKSIETYRSRLM 184 Query: 156 YKLKLRRMSDIVTLGI 171 KL + + +V + Sbjct: 185 VKLGVGNIPALVKFAL 200 >UniRef50_C1A730 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A730_GEMAT Length = 209 Score = 80.1 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 70/194 (36%), Gaps = 24/194 (12%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNK-PFKVIIDTYHNHILDE 55 I L+ + L +G L + + +++ + + I N P VI D + Sbjct: 8 ILLVDDHAILREGLAALLNGVDGMQVIGQAGDGATAIDLYRNLLPDVVICDLRMVPMDGT 67 Query: 56 EAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 E + ++L + + + ++ + L++ + + K Sbjct: 68 EVTSTIRAEFPAARVILLTTYDTDEEVFRGLRAGASSYLLKDVEPAQLIDTVHAVYAGRK 127 Query: 111 NSQLC-------------FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYK 157 + Q ++++ + + ++ I +TL IS+ T+K I+ K Sbjct: 128 AIDPSIAAKLAEHVASDALTARQLEVLRSLAEGRSNIEIANTLYISEGTVKAHIKAILQK 187 Query: 158 LKLRRMSDIVTLGI 171 L R + VT+GI Sbjct: 188 LGARDRTQAVTIGI 201 >UniRef50_A9DM99 Transcriptional regulator, LuxR family protein n=1 Tax=Kordia algicida OT-1 RepID=A9DM99_9FLAO Length = 212 Score = 79.7 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 75/199 (37%), Gaps = 29/199 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKV-IIDTYHNHILDE 55 I + ++ G L H IK+ + +K + N + ++D + Sbjct: 9 IIIADDHQIVIDGLKSLLVAHPHIKVVGEASDGEEALKLIENNTVNIAVLDISMPKMNGV 68 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEI--------- 101 E K ++K I++ H I +L ++ + + +E Sbjct: 69 ETTKIIKKKYPYIKILILTMHDGDEFIHELFEIGADGYILKNRGKEEFVEALETINNGEE 128 Query: 102 -TYGKHLPH--------KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKF 152 GK L K+ + F+ + +++LI+ + S I++ LNI+ T++ + Sbjct: 129 YIKGKVLNVLLDAVRKPKSKTIQFTKREKDVLRLIVGDHTTSEISAKLNIANSTVETHRR 188 Query: 153 NIMYKLKLRRMSDIVTLGI 171 N++ K ++ +V + Sbjct: 189 NLIEKTGVKSSLGLVRYAV 207 >UniRef50_C4ZM15 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZM15_THASP Length = 226 Score = 79.7 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 23/199 (11%), Positives = 65/199 (32%), Gaps = 33/199 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIK-----INSLSEIKKVGN-KPFKVIIDTYHNHILDE 55 + L+ S + G L + + + ++ +P V++D + + Sbjct: 6 VLLVDDHSLVRAGIRALLGSIAGVAGIEEASSGRQAVELAATMQPDLVLMDIAMDDMDGL 65 Query: 56 EAIKFLEKLDAERIIVLAPYHI-----SKLKAKAPIYFVSRKESIKNLLEITYGKHLPH- 109 A + + +V+ H + ++ + ++ L Sbjct: 66 AATRTIAAAHPHIKVVILSMHDTGDFFEQALRCGARGYLLKDAAVAELEMAIAAVMRGDV 125 Query: 110 ---------------------KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 + + + Q +I++LI I L++S +T++ Sbjct: 126 YLSPAVSRHLVGNMLARPPEDERAASVLTPRQTEILELIGSGLGTKEIARRLDLSVKTVE 185 Query: 149 IQKFNIMYKLKLRRMSDIV 167 + IM +L +R +++++ Sbjct: 186 AHRAQIMERLGVRDIANLL 204 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 79.7 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 71/205 (34%), Gaps = 39/205 (19%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKVII-DTYHNHILDE 55 + + + + G Q + E I N + ++ V V++ D + Sbjct: 4 VLIADDHAVVRGGLRQFLSSTEEFDIVAEAANGQTALELVRTSGCDVVLLDITLPDLNGL 63 Query: 56 EAIKFLEKLDAER-IIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITY------- 103 E +K +++ + +++ + + + ++++ +L + Sbjct: 64 EVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGASGYLNKDSPPAQILAALHTVVAGAR 123 Query: 104 -----------------GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 GK LPH+N S + ++ L+ K + I ++S +T Sbjct: 124 YVSPSLAERLLAGTMSPGKRLPHEN----LSPREMAVLLLLSKGVPLTRIGEQFHLSVKT 179 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGI 171 + + I+ KL L ++I + Sbjct: 180 ISTYRARILEKLDLASNAEITRYVL 204 >UniRef50_C5T9S0 Two component transcriptional regulator, LuxR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9S0_ACIDE Length = 204 Score = 79.7 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 71/195 (36%), Gaps = 24/195 (12%) Query: 2 IFLMTKDSFLLQGFWQLK----DNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEA 57 L+ + G L D HE+++ S + + + + Sbjct: 3 FLLIDDHALFRFGLRALLMSLPDGHEVVEAPSCEAALALDAAVVAPDVVVLDLTLPGIQG 62 Query: 58 IKFLEKLD----AERIIVLA----PYHISKLKAKAPIYFVSRKESIKNLLEIT-----YG 104 ++ LE+L I+V++ P + + F+ + S +++ G Sbjct: 63 LEGLERLRAWHPPATIVVMSAAEGPEWAVEGLRRGARGFIPKSLSPAAMVQALEQVMRGG 122 Query: 105 KHLPHKNS-------QLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYK 157 H+ ++ + + Q +++ L+ +N + I TL++S T+++ I Sbjct: 123 VHVHALDTLGVARRTGIELTPRQRQVLGLLTQNYSNKAIARTLDMSVNTVRVHVAAIFGA 182 Query: 158 LKLRRMSDIVTLGIT 172 L++ D + IT Sbjct: 183 LEVDNRVDAARMAIT 197 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 79.7 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 23/197 (11%), Positives = 63/197 (31%), Gaps = 26/197 (13%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI------NSLSEIKKVGNKPFKVIIDTYHNHILDE 55 + + + QG D + + + ++P V++D Sbjct: 7 VLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPGSDGA 66 Query: 56 EAIKFLEKLD-AERIIVLA----PYHISKLKAKAPIYFVSRKESIKNLLEITYGKH---- 106 + + L D ++IVL +++ A F+ + +L + Sbjct: 67 KVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVADGQV 126 Query: 107 -----------LPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIM 155 P + + +++ L+ ++ I L+++++T+K ++ Sbjct: 127 IFAREAVTAMTAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTVKTHLSSLF 186 Query: 156 YKLKLRRMSDIVTLGIT 172 KL + + +T Sbjct: 187 RKLGVADRTQAALYAVT 203 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 79.7 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 23/200 (11%), Positives = 67/200 (33%), Gaps = 32/200 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL--------SEIKKVGNKPFKVIIDTYHNHIL 53 + L+ + + QG E I++ E +++ +P V++D + Sbjct: 16 VLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEAERL--RPEVVVMDLMMPVMD 73 Query: 54 DEEAIKFLEKLDAERIIVLAPYHISK-----LKAKAPIYFVSRKESIKNLLEITYG---- 104 A + L + + ++ + + I ++ + S L + + Sbjct: 74 GITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHAAARG 133 Query: 105 -------------KHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 + + + + ++QL+ + ++ +I + +S+ T+K Sbjct: 134 EVRLHPEAARRLVRDFRSPEMRESLTPKETAVLQLLARGQSNKDIAAEQGVSEATVKTHV 193 Query: 152 FNIMYKLKLRRMSDIVTLGI 171 ++ KL L + + Sbjct: 194 SRLLSKLGLDSRTQAALYAL 213 >UniRef50_C4KBL1 Two component transcriptional regulator, LuxR family n=8 Tax=Betaproteobacteria RepID=C4KBL1_THASP Length = 212 Score = 79.7 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 69/194 (35%), Gaps = 22/194 (11%) Query: 1 MIFLMTKDSFLLQGF-WQLKDNHEMIKINSLSEIKKVGNKPFK---VIIDTYHNHILDEE 56 ++ ++ D L W L+ N + ++ E P V++D + E Sbjct: 11 IVHVVDDDEALRDSLAWMLEANGHAVAVHESGEAFLAACTPEMTGCVLLDVRMPGMSGLE 70 Query: 57 AIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITY-------- 103 + L + +V H + + FV + + +L + Sbjct: 71 VFEELGRRRCGLPVVFITGHGDVPMAVSALKQGAVDFVEKPFGEREMLRVVEQCLRLERE 130 Query: 104 GKHLPHKNSQLC-----FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKL 158 + + + + + ++++LI+ K I L IS +T+++ + +M K+ Sbjct: 131 TRDRRLQEADTARRLGLLTQREREVLELIIVGKLNKQIADVLGISIKTVEVHRARVMEKM 190 Query: 159 KLRRMSDIVTLGIT 172 ++++V + Sbjct: 191 GAHSLAELVQHVVV 204 >UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae RepID=B8GSX5_THISH Length = 220 Score = 79.7 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 68/203 (33%), Gaps = 34/203 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMI---------KINSLSEIKKVGNKPFKVIIDTYHNHI 52 + L+ + G L D + + ++ KP V++D I Sbjct: 4 VLLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEAKRLKPDVVLMDINMPGI 63 Query: 53 LDEEAIKFLEKLDA-ERIIVLAPYHI----SKLKAKAPIYFVSRKESIKNLLEITYGKHL 107 A + + + +++VL + ++++ I+ ++ G Sbjct: 64 GGLVATRRIVEAQPSVKVLVLTAMDEGPVPRWVLEAGASGYLTKGCRIEEMIAAIQGAMQ 123 Query: 108 PHKNSQLC--------------------FSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 ++ S + +I+ +IL+ + I + LNIS +T+ Sbjct: 124 GERHISPAVAQRLALGGLAKGQANPFDELSGRERQILLMILQGQTPQAIATALNISPKTV 183 Query: 148 KIQKFNIMYKLKLRRMSDIVTLG 170 K +M KL + +VTL Sbjct: 184 STYKCRVMGKLGISNDMQLVTLA 206 >UniRef50_C9RXQ8 Two component transcriptional regulator, LuxR family n=3 Tax=Geobacillus RepID=C9RXQ8_GEOSY Length = 200 Score = 79.7 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 71/190 (37%), Gaps = 19/190 (10%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKVGN-KPFKVIIDTYHNHILDE 55 I ++ ++ G QL + +++ K++ + +P ++ID Sbjct: 6 ILIIGDHGLVMDGIRQLLEREPDLEVVGAVFSPAELEKEIAHFQPDIIVIDAPSQRENYL 65 Query: 56 EAIKFLEKLDAERIIVL-----APYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 K + +V+ + ++ + FVS+ +S + L+ + K Sbjct: 66 IWTKNISSRFPASKVVMLSGDASAEYVQAVHEAGAYAFVSKCDSAETLIHAIRESYRGVK 125 Query: 111 --------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRR 162 + + + ++ LI ++K I LNIS++T++ +I+ KL ++ Sbjct: 126 SFPTDLAFHDGSPLTEMELAVLDLIARDKTNREIGEQLNISKRTVEHHVSSILRKLHVKS 185 Query: 163 MSDIVTLGIT 172 + V Sbjct: 186 RAGAVGKAFR 195 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 79.7 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 24/205 (11%), Positives = 70/205 (34%), Gaps = 33/205 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI------NSLSEIKKVGNKPFKVIIDTYHNHILDE 55 I+L+ + +GF + + + + + + + KP V++D Sbjct: 24 IYLIDDHPVVREGFARALSDEPDMVVVGQAGTAADALRETASCKPDVVLVDLNIPDRDGI 83 Query: 56 EAIKFLE-KLDAERIIVLAPYHIS----KLKAKAPIYFVSRKESIKNLLEITYGKHL--- 107 E + L +L +++VL+ Y + ++ + ++ ++E Sbjct: 84 ELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIEGIRRIATGGA 143 Query: 108 ----------------PHKNSQLCF---SHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 P + + ++++L+ + + L IS +T++ Sbjct: 144 PLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLTISPKTVE 203 Query: 149 IQKFNIMYKLKLRRMSDIVTLGITS 173 + I KL + ++ + + + Sbjct: 204 THRVRIYAKLGCKSAVELTRIAVRT 228 >UniRef50_C1XKQ4 Two component transcriptional regulator, LuxR family n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XKQ4_MEIRU Length = 194 Score = 79.3 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 25/184 (13%), Positives = 62/184 (33%), Gaps = 15/184 (8%) Query: 2 IFLMTKDSFLLQGFWQLKDNHE---MIKINSLSEIKKVGNK--PFKVIIDTYHNHILDEE 56 + + G + + + E K+G + P V++D + Sbjct: 3 LLIADDHPLFRMGLRAALEREGFAVVAEAGDGQEAVKLGLELLPDGVLLDVRMPQMDGIT 62 Query: 57 AIKFLEKLDAERIIVLA-----PYHISKLKAKAPIYFVSRK---ESIKNLLEITYGKHLP 108 A + L + +I L P + + + S++ E++ L P Sbjct: 63 ATRMLREQRYNGLIALLTTFNEPVLVQQAAYAGADAYWSKELPPEALAERLRRLGLGLEP 122 Query: 109 HKNSQ--LCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDI 166 + + + +++Q + + + I ++IS +T+K + KL+ R + Sbjct: 123 RLRAPELPRLTAREQEVLQWMAQGLSTKEIARQMHISPETVKDHLLRLYEKLEARNRVEA 182 Query: 167 VTLG 170 + Sbjct: 183 LERA 186 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 79.3 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 72/200 (36%), Gaps = 30/200 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNK------PFKVIIDTYHNHILDE 55 + L+ + + G +L + H IK+ + +E + + P ++D + Sbjct: 8 VLLVDDHTVVRSGLCRLLEQHSGIKVVAEAESGEQAYQVFGEYLPDVTVMDLSMPGMGGL 67 Query: 56 EAIKFLEKLDAERIIVLAPYHISKLKA-----KAPIYFVSRKESIKNLLEIT----YGKH 106 EA++ + +++ H + A +V++ S L++ GK Sbjct: 68 EAMRRILARYRTARVLIFSMHENAAFAMQTLKSGARGYVAKTGSFDELVKAVVEVARGKS 127 Query: 107 ---------------LPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 + + S +F++ +L + KN I L ISQ+T+ Sbjct: 128 YISTSIAQKIALQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQKTVANYH 187 Query: 152 FNIMYKLKLRRMSDIVTLGI 171 + KL L ++V I Sbjct: 188 TLVKQKLGLSNPVEMVRFAI 207 >UniRef50_A5FNZ8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteroidetes RepID=A5FNZ8_FLAJ1 Length = 221 Score = 79.3 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 78/208 (37%), Gaps = 36/208 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGN---KPFKVIIDTYHNHIL 53 I L+ + +G L + I+I N + K+ KP +I+D + Sbjct: 7 IALVDDEVLFRKGIAFLLQREDNIEIVFEASNGEDLVNKLLENEIKPDIIIMDLKMPVLN 66 Query: 54 DEEAIKFLEKLDAE-RIIVLAPYHISKLKAK----APIYFVSRKESIKNLLEITY----- 103 EA K + K E +II L Y A + ++ + + K+L++ Sbjct: 67 GVEATKIIRKSFPEIKIIALTSYDSKSFIANMIQVGAVAYLIKNTTPKDLIKTINEVNKK 126 Query: 104 ------------------GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQ 145 K+ S + +I+QLI + K S I L +S + Sbjct: 127 GFYYNESVLKTIQETIVSSKNSKGNLETSFLSPREIEILQLICQQKTTSEIAEHLFLSPR 186 Query: 146 TLKIQKFNIMYKLKLRRMSDIVTLGITS 173 T++ + N++ K + R ++ +V I + Sbjct: 187 TVEGHRNNLLLKTESRNIAGLVVYAIQN 214 >UniRef50_C5T0X1 Two component transcriptional regulator, LuxR family (Fragment) n=2 Tax=Burkholderiales RepID=C5T0X1_ACIDE Length = 191 Score = 79.3 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 24/187 (12%), Positives = 59/187 (31%), Gaps = 24/187 (12%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKVGNKPFKVIIDTYHNHILDEE 56 + L+ + G + +H ++ + V++D + + Sbjct: 5 LLLVDDHALFRTGLRLIVQDHPAVQTIHEAGTVAEACGLKLDAADLVLLDIQMPGMSGLD 64 Query: 57 AIKFLEKLDAERIIVL-----APYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK- 110 ++ L + IVL AP I + + + F+ + S +++L+ Sbjct: 65 GLRLLRQACPRARIVLVSASVAPDAIHEARVRGADGFLPKSASAEDILDAITCALAGDPC 124 Query: 111 -------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYK 157 + Q ++ + K I L +S+ T+++ I + Sbjct: 125 FPAHCGNAPPLRAPVAPALTARQLDVLLQLCTGKPNKVIARNLGLSENTVRVHVAAIFAQ 184 Query: 158 LKLRRMS 164 L + S Sbjct: 185 LGVNSRS 191 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 79.3 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 23/205 (11%), Positives = 70/205 (34%), Gaps = 32/205 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLS-------EIKKVGNKPFKVIIDTYHNHILD 54 + + + + G + + ++ + ++ + + +++D Sbjct: 4 VIIADDHTVVRNGLRHILERTSDFEVVGEAARGTEVPQLVRELSPHV-ILLDLSMPGRNG 62 Query: 55 EEAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLP- 108 E I+ L I++ H + + +++++ + L+E Sbjct: 63 LELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKVAAGG 122 Query: 109 -----------------HKNSQL-CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ 150 ++ S + ++ + I+ ++ + I + L +S +T+ Sbjct: 123 TYVSPAMAEKLALGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKTVSTY 182 Query: 151 KFNIMYKLKLRRMSDIVTLGITSYF 175 K +M KL+LR + +V I + Sbjct: 183 KMRLMEKLQLRSDAALVRYAIEARL 207 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 79.3 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 24/205 (11%), Positives = 59/205 (28%), Gaps = 33/205 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLS------EIKKVGNKPFKVIIDTYHNHILDE 55 I ++ + + G Q+ ++ + +P V++D + Sbjct: 4 ILIVEDHALMRIGLRQVLSQTPEYEVAGEAADGEQALALARSLQPDLVLMDLGLPVMSGT 63 Query: 56 EAIKFLEKLDAERIIVLAPYHISK-----LKAKAPIYFVSRKESIK--NLLEITYG---- 104 E + L++ ++ H A + + + LL Sbjct: 64 EVTRILKREYPAMRVLALTSHDEDESVFGALAAGADGYCLKATAGIASRLLAAVASVRDG 123 Query: 105 ----------------KHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLK 148 +P + S + ++++LI + I L I+ T++ Sbjct: 124 AAWLDPDIADRVLRDLGRIPQAGADNPLSEREMEVLKLIADGLTNAEIGRRLYIASGTVR 183 Query: 149 IQKFNIMYKLKLRRMSDIVTLGITS 173 + NI+ KL + + Sbjct: 184 VHVSNIIAKLGVNDRVQAAVRALRE 208 >UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCN0_METPP Length = 210 Score = 79.3 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 27/199 (13%), Positives = 74/199 (37%), Gaps = 30/199 (15%) Query: 2 IFLMTKDSFLLQGFWQLKD-NHEMIKINSLSEIKKVGNK-----PFKVIIDTYHNHILDE 55 + L+ + + +G+ +L + +++ + + + N+ P V+ID + Sbjct: 5 VMLVDDHAIVREGYKRLLELQSDIVVVAEAGDGGEALNQWRALRPAVVVIDLGLPGMGGL 64 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEITYGK----- 105 E I L + D ++ H +++ + +V++ + L+ Sbjct: 65 ELIARLRQRDEACRMLAFSMHRDAVWVAQALRAGALGYVTKSSAPSQLVAAVREVNQGRR 124 Query: 106 --------------HLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 P ++ S +F++M+L++ + I +L++S +T+ Sbjct: 125 VLSPDVSGEVASALLDPQDSAAHGLSPREFEVMRLLVGGRTPQEIAQSLSLSVKTVHNVH 184 Query: 152 FNIMYKLKLRRMSDIVTLG 170 + I KL ++ + Sbjct: 185 YQIKSKLGTASDFELARMA 203 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 79.3 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 69/197 (35%), Gaps = 28/197 (14%) Query: 2 IFLMTKDSFLLQGFW---QLKDNHEMIKINSLSE---IKKVGNKPFKVIIDTYHNHILDE 55 + L+ + G L+ + E++ S E K + KP V++D + Sbjct: 6 VMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMPKMTGV 65 Query: 56 EAIKFLEKLDAE-RIIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITYGKHLP-- 108 EA L K + +I++L Y ++ + ++ + S +L L Sbjct: 66 EATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRKVALGEY 125 Query: 109 ---------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFN 153 H + + + +I+ L+ K + I IS +T+K N Sbjct: 126 AIETEVEKKVEHHKRHPDLHDDLTAREREILTLLAKGYDNQRIADESFISLKTVKTHVSN 185 Query: 154 IMYKLKLRRMSDIVTLG 170 I+ KL + + V Sbjct: 186 ILSKLAVSDRTQAVVYA 202 >UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR family n=3 Tax=Anaeromyxobacter RepID=Q2IIQ2_ANADE Length = 210 Score = 79.3 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 28/206 (13%), Positives = 71/206 (34%), Gaps = 39/206 (18%) Query: 2 IFLMTKDSFLLQGFWQLKDNH-------EMIKINSLSEIKKVGNKPFKVII-DTYHNHIL 53 I L + G ++ + E I + E ++G +P+ V++ D Sbjct: 4 ILLADDHAMFRSGLRRILEAEFPGASVGEAATIADVQE--RLGAQPWDVLLLDISMAGQN 61 Query: 54 DEEAIKFLEKLDAER-IIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITY----- 103 A+ L++ ++VL+ Y + +++++ + + L+ Sbjct: 62 SLNALPPLKERHPRLPVVVLSMYGDRQFVIQALRAGASAYLTKERAPEELIRAIRSVLAG 121 Query: 104 -----------------GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 G + S + +I + ++ S I L +S +T Sbjct: 122 RRYVGDDLAEQLADHLAGGGTGSPHE--RLSPRELEIFLQLAAARSVSEIAERLQLSVKT 179 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGIT 172 + + I+ K+ LR ++++ + Sbjct: 180 VSTYRGRILEKMALRSNAELMQYAVR 205 >UniRef50_C7PMV2 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMV2_CHIPD Length = 222 Score = 78.9 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 21/209 (10%), Positives = 69/209 (33%), Gaps = 35/209 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEIKKVGNKPFKVII-DTYHNHILDE 55 + + G + I + N ++ + + V++ D + Sbjct: 7 LVIADDHEIFRDGLALMLSRQPDITLVGQANNGRELLELLTSVEADVVMTDLKMPLMDGI 66 Query: 56 EAIKFLEKLDAERIIVLAPYHISKLK-----AKAPIYFVSRKESIKNLLEITYGKHLPH- 109 A + L + + + I+ + ++ + + ++E + H Sbjct: 67 TATRALLQRNPDIKIIALSMFDEEELIVEMLEAGAKGYLLKNADKQEIIEAINSVYEDHI 126 Query: 110 -----------------------KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 +N+ + F+ + +I++LI + I + +S++T Sbjct: 127 FYCRQTSARLAAMIVKSRFNPPRENNAVTFTDREKEIIRLICQQFTAQEIGDKIFLSKRT 186 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 ++ + I+ K+ ++ + +V + + Sbjct: 187 VEGHRTRILEKMNVKNTAGVVVFALKNNL 215 >UniRef50_C7PJC5 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteroidetes RepID=C7PJC5_CHIPD Length = 208 Score = 78.9 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 24/199 (12%), Positives = 71/199 (35%), Gaps = 30/199 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINS------LSEIKKVGNKPFKVIIDTYHNHILDE 55 IF+ + +G + + E + + +P +++D I Sbjct: 4 IFITDDHPIVREGLKNVLNATEGFAVTGTCSTGKETLEAFEKKEPDILLLDINLPDINGV 63 Query: 56 EAIKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLLEIT-----YGK 105 E ++K + ++ H I+ + + ++ + + ++E G Sbjct: 64 ELCAAVKKKHPDVYVIALSVHNEAPIINSILRQGASGYIQKNALSEIIVEAIQDVLKGGS 123 Query: 106 HLPHKNSQL--------------CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQK 151 ++ ++ ++ + + +I++L + + I L IS T++ + Sbjct: 124 YVCEQSREILRRQRGKGGLTQLPKMTRREKEILKLAAEGLTIAQIAEKLFISPYTVESHR 183 Query: 152 FNIMYKLKLRRMSDIVTLG 170 N+M K ++ ++ + L Sbjct: 184 KNLMDKFEVNSVAAAIKLA 202 >UniRef50_Q2YB36 Two component transcriptional regulator, LuxR family n=3 Tax=Betaproteobacteria RepID=Q2YB36_NITMU Length = 217 Score = 78.9 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 72/204 (35%), Gaps = 36/204 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI-----NSLSEI--KKVGNKPFKVIIDTYHNHILD 54 + L+ + L G L + +++ + + K G+ V++D + Sbjct: 8 VMLVDDHAMLRHGMAMLINLEPDMEVFAEAGDGDEALATLKAGHHADIVLMDVSLKTLSG 67 Query: 55 EEAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITY------ 103 E IK + L +++ H + +V ++E + L+ + Sbjct: 68 FEVIKSIHTLLPALPVLVVSMHDEGVYAERALRAGARGYVMKQEPGEVLVTAIHEVLKGN 127 Query: 104 -----------------GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQT 146 G P + ++F+++ LI + I L+ S +T Sbjct: 128 IYLSKPMHAKLLNRVAGGNSEPEPLIN-SLTPSEFEVLHLIGSGHSSQEIAKLLSRSIKT 186 Query: 147 LKIQKFNIMYKLKLRRMSDIVTLG 170 ++ +FNI KL L+ +D++ Sbjct: 187 IETHRFNIRTKLNLKDGADLIRYA 210 >UniRef50_UPI0001744C34 response regulator with a HTH DNA-binding domain n=2 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744C34 Length = 234 Score = 78.9 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 27/203 (13%), Positives = 67/203 (33%), Gaps = 34/203 (16%) Query: 4 LMTKDSFLLQGFWQLKDNHEMIK------INSLSEIKKVGNKPFKVIIDTYHNHILDEEA 57 ++ +F+ +G ++ + + + K ++P +I+D E Sbjct: 21 IVEDHTFMQEGMKVFVESLPGFECAWLAGTAAEAVEKIAQDEPNVLIVDITLPDRSGLEL 80 Query: 58 IKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSR--------------------- 91 IK L + +++ H + ++ + Sbjct: 81 IKDLHATHNQMHVLVVSMHEEDLYAERALKAGAKGYIMKNAPHDVFESALTRVSQGGVAV 140 Query: 92 -KESIKNLLEITYGKHLPHKNSQ-LCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 + +L P +S S +F++ Q + + K+ + ++ IS +T+ + Sbjct: 141 SHKMTDRVLMAFSSGVQPRPDSGLHNLSDREFEVFQHLGEGKSTHQVAESMRISPKTVDV 200 Query: 150 QKFNIMYKLKLRRMSDIVTLGIT 172 + NI KL L + + I Sbjct: 201 HRMNIKNKLNLEDGAAVTRYAIR 223 >UniRef50_Q39C19 Two component transcriptional regulator, LuxR family n=60 Tax=Betaproteobacteria RepID=Q39C19_BURS3 Length = 271 Score = 78.9 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 27/205 (13%), Positives = 79/205 (38%), Gaps = 31/205 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIK-----INSLSEIKKVGNKPFKVII-DTYHNHILDE 55 I L+ + + QG QL + + + N + V + F VI+ D Sbjct: 5 ILLVDDHAIVRQGIRQLLIDRGVARDVTEAENGGDAVAAVDKQEFDVILLDISLPDTNGI 64 Query: 56 EAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITY------- 103 E +K L++ +++ + + ++S+ + ++ Sbjct: 65 EVLKRLKRKLPRTPVLMFSMYREDQYAVRALKAGAAGYLSKTVNAAQMIGAIQQVAAGRK 124 Query: 104 ----------GKHLPHKNSQLC---FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ 150 +++ +N L S +++ + ++ K ++I +TL++S +T+ + Sbjct: 125 YVSPAMAEALAEYVSFENEPLPHEKLSDREYQTLCMLASGKRLTDIANTLSLSVKTVSVY 184 Query: 151 KFNIMYKLKLRRMSDIVTLGITSYF 175 + ++ K++L +++ +++ Sbjct: 185 RSRLLEKMRLSNNAELTFYVMSNRL 209 >UniRef50_C7PCU2 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PCU2_CHIPD Length = 220 Score = 78.9 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 73/204 (35%), Gaps = 32/204 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEM-IKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKF 60 I ++ +D+ L++ QL H + +S +E + ++ I + F Sbjct: 8 ILVIEEDAALIRKIQQLLTLHHYDVHTSSTAEEGIYICRQYQPDIVVCGVKLRGSSGFHF 67 Query: 61 LEKLDAERIIVLAPYH----------ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPH- 109 L +L + + P+ + F+SR K LL + Sbjct: 68 LMELRNDTSLQHIPFIFISGKEGKEDMRMGMNLGADDFLSRPFKSKELLMSIKSRLTRFT 127 Query: 110 --------------------KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 + + S +F++MQ+I + + I +LNIS +T++ Sbjct: 128 IFNVQQRDKHTTIISVPAIPQEAHHKLSKTEFRVMQMIAEGMSTKEIAQSLNISIKTVEN 187 Query: 150 QKFNIMYKLKLRRMSDIVTLGITS 173 + NI KL L + ++ I + Sbjct: 188 HRHNISKKLNLTGHNSLIKYAIKN 211 >UniRef50_Q1IJ83 Two component transcriptional regulator, LuxR family n=2 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ83_ACIBL Length = 233 Score = 78.9 bits (193), Expect = 7e-14, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 74/203 (36%), Gaps = 31/203 (15%) Query: 2 IFLMTKDSFLLQGFWQLKDNH-EMIKINSLSEIKK---VGNKPFKVIIDTYHNHILDEEA 57 I L + + + +L + E++ I + V KP +I D + +A Sbjct: 26 ILLADDHNLVAELCKKLLETEYEVVGIATDGRALVRAAVELKPDVIIADVGMPLLNGLDA 85 Query: 58 IKFLEKLDAERIIVLAPYH-----ISKLKAKAPIYFVSRKESIKNLL----EITYGKHLP 108 + +++ I+ + ++ + ++ + + ++ E+ GK Sbjct: 86 AQQVKQKLPTVKIIFLTMNPDPDIAAEAFRRGASAYLVKTSAASEVVASVREVLRGKTYV 145 Query: 109 HK------------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ 150 + + Q +++QL+ + K + + LN++ +T+ Sbjct: 146 SPTIPREMIDLSLWQHKKLVDETHKLTDRQREVLQLLAEGKGMKEVAAILNMTTRTVAFH 205 Query: 151 KFNIMYKLKLRRMSDIVTLGITS 173 K+ IM L + +D+V + + Sbjct: 206 KYRIMEVLGTKNNADLVKYAVRN 228 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 78.9 bits (193), Expect = 7e-14, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 70/198 (35%), Gaps = 28/198 (14%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIK-----INSLSEIKKV-GNKPFKVIIDTYHNHILDE 55 + ++ + G + + + + + + +P V++D + Sbjct: 4 VLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQLSGI 63 Query: 56 EAIKFLEKLDAE-RIIVLAPY----HISKLKAKAPIYFVSRKESIKNLLEITYGKHLP-- 108 E ++ R +VL Y +I ++ + S + + + Sbjct: 64 EVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYEGGA 123 Query: 109 ---------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFN 153 + ++ S + ++QL+++ ++ I +LNIS+ T+K + Sbjct: 124 ALQSGIAARVLKRLATEPAEDELSQRELDVLQLLVRGESNKAIALSLNISENTIKSHVSH 183 Query: 154 IMYKLKLRRMSDIVTLGI 171 I KL +R ++ V + + Sbjct: 184 IFSKLDVRSRAEAVAVAL 201 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 78.9 bits (193), Expect = 7e-14, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 66/206 (32%), Gaps = 37/206 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSL-----SEIKKVGNKPFKVI-IDTYHNHILDE 55 + L + GF + + + I++ ++ + V+ +D + Sbjct: 23 VVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDVQMPKLDGL 82 Query: 56 EAIKFLE----KLDAERIIVLAPYHIS----KLKAKAPIYFVSRKESIKNLLEITY---- 103 EA + L ++I+L + + F+ + S ++L+E Sbjct: 83 EATRRLLGPAGADHPTKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLIESVRIVAR 142 Query: 104 ---------------GKHLPHKNSQ----LCFSHNQFKIMQLILKNKNESNITSTLNISQ 144 P + +F+++ L+ K + + I L + + Sbjct: 143 GDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEIARQLVLGE 202 Query: 145 QTLKIQKFNIMYKLKLRRMSDIVTLG 170 T+K I+ KL LR + V Sbjct: 203 TTVKTHVSRILTKLNLRDRTHAVVFA 228 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 78.6 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 69/206 (33%), Gaps = 34/206 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKI----NSLSEIKKVGN-KPFKVIIDTYHNHILDEE 56 + ++ L +G + N ++ I N ++ V KP V++D + E Sbjct: 3 VLIVDDHLMLRKGVLSVLSNTDLEVIGEASNGQEALELVPKLKPDLVLMDINMPVLDGVE 62 Query: 57 AIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITYGKHLPH-- 109 A + L+++ + +V+ + ++ + + L+ Sbjct: 63 ATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAISGEAP 122 Query: 110 ----------------------KNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 K S + ++++L I + L +++ T+ Sbjct: 123 ISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVAESTV 182 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGITS 173 K +I+ KL LR S+ V I + Sbjct: 183 KNHMRHILEKLHLRNRSEAVGYAIRT 208 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 78.6 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 66/194 (34%), Gaps = 24/194 (12%) Query: 2 IFLMTKDSFLLQGFWQLKDNHE----MIKINSLSEIKKV--GNKPFKVIIDTYHNHILDE 55 I L L Q + E ++ ++P ++D + Sbjct: 11 ILLADDHPILGQALTMFLQCESDMTVIGHAGDGREALELFHQHQPDVALMDLRMPKMEGA 70 Query: 56 EAIKFL-EKLDAERIIVLAPYH----ISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 +AI + K RI+VL + I + ++ + LL+ H K Sbjct: 71 DAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAIRTVHKGQK 130 Query: 111 NSQLC-------------FSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYK 157 S + ++++LI K KN I++ LNI++ T++ NI K Sbjct: 131 YIPPTIAAKLAERMSSEELSDRELEVLRLIAKGKNNQQISNVLNIAESTVRFHTNNIFGK 190 Query: 158 LKLRRMSDIVTLGI 171 L + + + + Sbjct: 191 LNVSDRTQALVTAL 204 >UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNZ3_9GAMM Length = 223 Score = 78.6 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 78/211 (36%), Gaps = 40/211 (18%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKK------VGNKPFKVIIDTYHNH---- 51 I L+ + GF +L + E I+I ++ + + P VI+D Sbjct: 7 ILLVDDHPLVRAGFQRLLISDESIEIVGEADNGQSACEMYASHMPDVVIMDLNMPSDANT 66 Query: 52 -------ILDEEAIKFLEKLDAE-RIIVLAPYHI----SKLKAKAPIYFVSRKESIKNLL 99 EAI+ + D + +++VL I + + F++++ + LL Sbjct: 67 EEMSNNLNGGLEAIRRIISHDPKAKVLVLTAMEIDPFPAHVVNAGAKGFLTKRCAPDELL 126 Query: 100 EITYGKHLPHK------------------NSQLCFSHNQFKIMQLILKNKNESNITSTLN 141 E H + S + + +I L+ + + S + + Sbjct: 127 EAVKAIHAGEEYITEEIRLRITEGGSADGASLASLTKRELQIFSLLAEGRTVSIVAEEMF 186 Query: 142 ISQQTLKIQKFNIMYKLKLRRMSDIVTLGIT 172 +S +T+ + NI KLK+ S++V L I Sbjct: 187 LSPKTVHAHRTNIFRKLKISNNSELVHLAIR 217 >UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteroidetes RepID=A5FAZ3_FLAJ1 Length = 219 Score = 78.6 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 73/203 (35%), Gaps = 38/203 (18%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLS------EIKKVGNKPFKVIIDTYHNHILDE 55 + L F+ G L +N I++ + KP +I+D ++ Sbjct: 7 VVLADDHVFVRDGIKSLLENEANIEVVGEAIDGADALEVVTATKPDLLIVDIRMPNLTGI 66 Query: 56 EAIKFLEKLDAERIIVLAPYHISKLK-----AKAPIYFVSRKESIKNLLEITYGKHLPHK 110 E ++ L + I++ H S+ ++ + S + L+ + K Sbjct: 67 EVVEKLRSENNNVKIIMLSMHESEEYVLKSIKAGADGYLLKGSSKEEFLKALHAVSSGGK 126 Query: 111 ---------------------------NSQLCFSHNQFKIMQLILKNKNESNITSTLNIS 143 ++ + + +I+ L+L K I L IS Sbjct: 127 YFSGDISSILISQLTNSTASLEPKQTLGEEMMITKREKEILTLLLSGKGNKEIAEALEIS 186 Query: 144 QQTLKIQKFNIMYKLKLRRMSDI 166 ++T ++ +FN+M KLK++ + ++ Sbjct: 187 KRTAEVHRFNLMKKLKVKNLMEL 209 >UniRef50_A5LFV2 FimR protein n=3 Tax=Porphyromonas gingivalis RepID=A5LFV2_PORGI Length = 227 Score = 78.6 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 29/218 (13%), Positives = 72/218 (33%), Gaps = 46/218 (21%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIK--------INSLSEIKKVGNKPFKVIIDTYHNHIL 53 I L+ G + + L K +P +I+D + Sbjct: 4 IVLVDDHELYRVGLRAAISQMQGLAEIVGECSSCEELETFLKEQKEPGLIILDIWLPDGN 63 Query: 54 DEEAIKFLEKLDA-ERIIVLAP----YHISKLKAKAPIYFVSRKESIKNLLEIT------ 102 + L+KL +II+L+ +++L A ++ + I ++ Sbjct: 64 GVNIARKLKKLYPAVKIIILSSEVSEKTVNELLAIDVEGYICKTAQINDIGNAIRTVTTG 123 Query: 103 ---YGKHLPHKNSQLC------------------------FSHNQFKIMQLILKNKNESN 135 YGK + +C + + +++Q + + Sbjct: 124 SHFYGKSVSKMILDICVSRSADQSHKKSKKQQQQQNDSSELTQREKEVVQYLCDGYSAKE 183 Query: 136 ITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITS 173 +++S +T++ + NI++KL ++++ + S Sbjct: 184 TAEKMHLSYRTVETHRSNILHKLGFSNAAELIRYAVKS 221 >UniRef50_Q24Z68 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24Z68_DESHY Length = 227 Score = 78.6 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 23/204 (11%), Positives = 60/204 (29%), Gaps = 34/204 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINS-----LSEIKKVGN-KPFKVIIDTYHNHILDE 55 +FL L Q D + + +++ + +P +++D Sbjct: 15 VFLADDHHILRQSLGVFLDQQRDLGVVGQAGTAEQAVREALHLRPDVILMDIDFLDFSGI 74 Query: 56 EAIKFLEKLDAERIIVLAPYHISK-----LKAKAPIYFVSRKESIKNLLEITYGKHLP-- 108 EA + K E I+ H + ++ + + +L+ Sbjct: 75 EATIQIRKEWPEARILALTMHSEENYLLPFLDAGGCGYLHKSAADTDLIRAIRMAAQGQV 134 Query: 109 ---------------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 H + + + +++ ++ + I L I+ T+ Sbjct: 135 FLRPEGLAVLTVQQKLNKKQKHCGGEPVLTERETQVLGMVARGYTSKEIGEKLYIAPSTV 194 Query: 148 KIQKFNIMYKLKLRRMSDIVTLGI 171 + ++ KL+ + +V I Sbjct: 195 DTYRERLIKKLEFTTRAQLVDYAI 218 >UniRef50_B4CYJ9 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYJ9_9BACT Length = 219 Score = 78.6 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 68/203 (33%), Gaps = 34/203 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSE------IKKVGNKPFKVIIDTYHNHILDE 55 + ++ +G QL + + + +P +++D + Sbjct: 10 VLIVEDHEIFREGLAQLINRQPDFMVCGECDDPKGIAAAIEKAEPDVLLLDLMLHGAGGI 69 Query: 56 EAIKFLEKLDAERIIVLAPYHIS-----KLKAKAPIYFVSRKESIKNLLEITYGKHLP-- 108 + IK L L + I++ H + + +V ++E+ +L + Sbjct: 70 DLIKQLHTLFPKVRILVLSMHDETVFAPRALRAGALGYVMKQEASGQVLAALRAVVVGEL 129 Query: 109 ---------------------HKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTL 147 + S + + +LI I + L IS +T+ Sbjct: 130 HVSRKVGITLMQRAIKMPELSAADGVAKLSDRELHVFELIGAGIPTREIATRLGISIKTV 189 Query: 148 KIQKFNIMYKLKLRRMSDIVTLG 170 + + NI +KL+L+ +++VT Sbjct: 190 ETHRENIKHKLELQSGTELVTRA 212 >UniRef50_A5FAW2 Two component transcriptional regulator, LuxR family n=2 Tax=Flavobacterium RepID=A5FAW2_FLAJ1 Length = 219 Score = 78.6 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 72/211 (34%), Gaps = 37/211 (17%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINSLSEI------KKVGNKPFKVIIDTYHNHILDE 55 I L L+ G L +I S + ++ +++D Sbjct: 6 IHLADDHQVLIDGLTNLLQTVSNFEIVGSSLNGVTVYDDVIQDQADILVLDISMPQKDGI 65 Query: 56 EAIKFL-EKLDAERIIVLAPY----HISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHK 110 E +K +K ++I+L+ Y I ++ ++++K + +N++E + + Sbjct: 66 EVLKEFNQKGLPCKVIILSSYDDLKIIKEVMKLGAKGYLTKKCAGENMIEAIEAVYEGQE 125 Query: 111 N--------------------------SQLCFSHNQFKIMQLILKNKNESNITSTLNISQ 144 S + +I+ LI + I+ L IS Sbjct: 126 YFSDAVREKIFSMFSQNNPKLNKNVYIENPILSPREIEIVTLICLEYSGKEISEKLFISV 185 Query: 145 QTLKIQKFNIMYKLKLRRMSDIVTLGITSYF 175 T++ + NIM KL ++ +V + + Sbjct: 186 NTVETHRKNIMKKLNIKNTIGLVKYALKNNL 216 >UniRef50_B3PDX5 Response regulator n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PDX5_CELJU Length = 225 Score = 78.6 bits (192), Expect = 9e-14, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 69/198 (34%), Gaps = 33/198 (16%) Query: 2 IFLMTKDSFLLQGFWQLKDNHEMIKINS-----LSEIKKVGNKPFKVII-DTYHNHILDE 55 + L+ D+ L + F ++ + ++ + + ++ +P +++ D Sbjct: 18 VLLLEDDTPLRERFARILGDWPGGELVAACATLSEALDRLHRQPVDLLMADLNLPDGHGI 77 Query: 56 EAIKFLEKLDAER-IIVLAPYHISK----LKAKAPIYFVSRKESIKNLLEITY------- 103 EAI+ L +L E +V++ + + ++ + L+E Sbjct: 78 EAIQLLRRLYPEADAMVISALADDETVLGAIEAGAVGYLLKDADSLELVEAIQELRAGRS 137 Query: 104 --------------GKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKI 149 G P + + +I++ I K + + L IS+ T+ + Sbjct: 138 PISSSIARILVRRMGGSTPA-TPTPELTPRETEILRGIAKGFTYTELAEWLGISRHTVPV 196 Query: 150 QKFNIMYKLKLRRMSDIV 167 NI KL S+ V Sbjct: 197 HIKNIYRKLAANNRSEAV 214 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.320 0.135 0.299 Lambda K H 0.267 0.0411 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 769,365,979 Number of Sequences: 3077464 Number of extensions: 26060689 Number of successful extensions: 116944 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 4252 Number of HSP's successfully gapped in prelim test: 1114 Number of HSP's that attempted gapping in prelim test: 111917 Number of HSP's gapped (non-prelim): 5505 length of query: 175 length of database: 1,040,396,356 effective HSP length: 120 effective length of query: 55 effective length of database: 671,100,676 effective search space: 36910537180 effective search space used: 36910537180 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 88 (38.5 bits)