 |
| Job Description | P60624 | | Confidence | 14.44% | Date | Thu Jan 5 12:06:57 GMT 2012 |
| Rank | 56 | Aligned Residues | 30 |
| % Identity | 40% | Template | c3dclC_ |
| PDB info |
PDB header:structural genomics, unknown function | Chain: C: PDB Molecule:tm1086; |
PDBTitle: crystal structure of tm1086
|
| Resolution | 2.25 Å |
|
|   |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
. | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| Query Sequence |   |
D | D | E | V | I | V | L | T | G | K | D | K | G | K | R | G | K | V | K | N | V | L | S | S | . |
G | K | V | I | V | E |
| Query Conservation |   |
|
|   |
|   |
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |
|   |   |   | . |   |   |
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|   |
|   |
|
|   |
|
|
|   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|   |
| Template Sequence |   |
G | N | E | V | I | V | X | S | G | D | A | K | G | S | R | G | F | V | T | G | K | H | G | G | V | N | H | V | L | V | H |
| Template Known Secondary structure |   |
T |
|  |  |  |  |
| S | S | T | T | T | T |
|  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|