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| Job Description | P05704 | | Confidence | 31.64% | Date | Thu Jan 5 10:58:48 GMT 2012 |
| Rank | 31 | Aligned Residues | 47 |
| % Identity | 23% | Template | c2npsA_ |
| PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:vesicle-associated membrane protein 4; |
PDBTitle: crystal structure of the early endosomal snare complex
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| Resolution | 2.50 Å |
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478 | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . |
| Predicted Secondary structure |   |
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| Query Sequence |   |
I | T | Q | V | S | Q | A | I | S | E | M | D | K | V | T | Q | Q | N | A | S | L | V | E | E | A | S | A | A | A | V | S | L | E | E | Q | A | A | R | L | T | E | A | V | D | V | F | R |
| Query Conservation |   |
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| Alig confidence |   |
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| Template Conservation |   |
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| Template Sequence |   |
I | K | H | V | Q | N | Q | V | D | E | V | I | D | V | M | Q | E | N | I | T | K | V | I | E | R | G | E | R | L | D | E | L | Q | D | K | S | E | S | L | S | D | N | A | T | A | F | S |
| Template Known Secondary structure |   |
S |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
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| Template SS confidence |   |
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54 | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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