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| Job Description | P05704 | | Confidence | 28.20% | Date | Thu Jan 5 10:58:48 GMT 2012 |
| Rank | 32 | Aligned Residues | 46 |
| % Identity | 20% | Template | c3b5nE_ |
| PDB info |
PDB header:membrane protein | Chain: E: PDB Molecule:synaptobrevin homolog 1; |
PDBTitle: structure of the yeast plasma membrane snare complex
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| Resolution | 1.60 Å |
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479 | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . |
| Predicted Secondary structure |   |
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| Query Sequence |   |
T | Q | V | S | Q | A | I | S | E | M | D | K | V | T | Q | Q | N | A | S | L | V | E | E | A | S | A | A | A | V | S | L | E | E | Q | A | A | R | L | T | E | A | V | D | V | F | R |
| Query Conservation |   |
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| Template Conservation |   |
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| Template Sequence |   |
A | E | L | Q | A | E | I | D | D | T | V | G | I | M | R | D | N | I | N | K | V | A | E | R | G | E | R | L | T | S | I | E | D | K | A | D | N | L | A | V | S | A | Q | G | F | K |
| Template Known Secondary structure |   |
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| Template Predicted Secondary structure |   |
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| Template SS confidence |   |
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30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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