Job Description P77515 Confidence 7.44% Date Thu Jan 5 12:30:11 GMT 2012 Rank 13 Aligned Residues 58 % Identity 28% Template d1fmd1_ SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Picornaviridae-like VP (VP1, VP2, VP3 and VP4) Resolution 3.50

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		91	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		Y	P	V	G	A	P	I	P	W	.	P	S	D	T	V	P	S	G	Y	A	L	M	Q	G	Q	T	F	D	K	S	A	Y	P	K	L	A	V	A	Y	P	S	G	V	I	P	D	M	R	G	W	T	I	K	G	K	P	A	S	G	R	A	V	L	S	Q	E	Q	D	G	I	K	S	H	T	H	S	A	S	A	S
Query Conservation											.
Alig confidence											.												.																				.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.																				.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	N	G	A	P	V	S	A	L	N	N	T	T	N	P	T	A	Y	H	K	.	G	P	V	T	R	L	A	L	P	Y	T	A	P	H	R	V	L	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T			G	G	G	G	G		T	T	S	S						.	S	S											S	S	S	S			S	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.																				.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.														.	130	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	D	L	G	T	E	T	T	S	S	F	D	Y	G	T	K	S	T	N
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	G	A	H	L	P	T	S	F	N	F	G	A	V	K	A	E
Template Known Secondary structure		.	.	.	.						T	T		S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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