Phyre 2 alignment of P77515 with c3fsnA_

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Job Description | P77515
Confidence | 1.87% | Date | Thu Jan 5 12:30:11 GMT 2012
Rank | 97 | Aligned Residues | 24
% Identity | 33% | Template | c3fsnA_
PDB info | PDB header:isomerase | Chain: A: PDB Molecule:retinal pigment epithelium-specific 65 kda protein; | PDBTitle: crystal structure of rpe65 at 2.14 angstrom resolution
Resolution | 2.14 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 119 | 120 | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | 130 | . | . | . | . |  | . | . | . | . | . | 140 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | . |  |  |  |  |  |  |  |
Query Sequence |  | S | A | Y | P | K | L | A | V | A | Y | P | . | . | . | . | . | . | . | . | . | . | S | G | V | I | P | . | D | M | R | G | W | T | I | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | G | Y | K | K | L | F | E | T | V | E | E | L | S | S | P | L | T | A | H | V | T | G | R | I | P | L | W | L | T | G | S | L | L | R
Template Known Secondary structure |  |  | G | G | G | G | G | G | S |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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