Phyre 2 alignment of P46850 with d1r0ua_

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Job Description | P46850
Confidence | 15.27% | Date | Thu Jan 5 12:04:22 GMT 2012
Rank | 39 | Aligned Residues | 34
% Identity | 24% | Template | d1r0ua_
SCOP info | Lipocalins | Lipocalins | Hypothetical protein YwiB
Resolution | 1.75

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 282 | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | N | Y | V | Q | K | E | Q | H | F | G | E | E | I | Y | V | T | R | K | G | A | V | S | A | R | A | G | Q | Y | G | I | I | P | G | S | M | G | A | K | S | F
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | I | V | K | V | S | E | . | . | . | G | E | V | L | V | M | R | S | G | A | V | K | M | N | . | . | . | Q | R | F | V | T | G | A | S | T | I | A | K | Y
Template Known Secondary structure |  |  |  |  |  |  |  | T | . | . | . | T |  |  |  |  |  |  |  |  | S | S | B |  |  | . | . | . |  |  |  |  | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 54 | . | . | . | . | . | 60 |  |  |  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |  |  |  | . | . | . | . | . | 80 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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