Phyre 2 alignment of P46850 with d1jmxa1

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Job Description | P46850
Confidence | 20.08% | Date | Thu Jan 5 12:04:22 GMT 2012
Rank | 19 | Aligned Residues | 18
% Identity | 11% | Template | d1jmxa1
SCOP info | Cytochrome c | Cytochrome c | Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2
Resolution | 1.90

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
Query Sequence |  | E | S | F | C | S | C | S | H | G | A | G | R | V | . | . | . | . | . | . | . | . | . | . | M | S | R | T | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Q | N | K | C | M | G | C | H | I | P | E | G | N | D | T | Y | S | R | I | S | H | Q | R | K | T | P | E | G
Template Known Secondary structure |  |  |  |  |  | B | T | T | B |  |  |  |  | T | T |  |  | T | T | G | G | G |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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