67 d1pama4 Probab=100.00  E-value=0  Score=451.15  Aligned_columns=354  Identities=20%

Q ss_pred             CCCCEEEEEEECCCCCCC----------------------CCHHHHHHHHH--HHHHCCCCEEEECCCCCCCCCC-----
Q ss_conf             988459999842686778----------------------51799998566--5897499899988700279999-----
Q batch____         1 MRNPTLLQCFHWYYPEGG----------------------KLWPELAERAD--GFNDIGINMVWLPPAYKGASGG-----   51 (495)
Q Consensus         1 ~~~~~~~~~f~~~~~~~~----------------------~~~~~i~~kld--yl~~lGv~aIwl~Pi~~~~~~~-----   51 (495)
                      .|++||+|.|-..-..+.                      |.|+||++|||  |||+||||+||||||++++.+.     
T Consensus        12 ~~~~viY~i~~~~F~~~d~~~~~~~~~~~~~~~~~~~~~gGd~~gi~~kLD~~YLk~LGv~~I~L~Pi~~~~~~~~~~~~   91 (406)
T d1pama4          12 FSTDVIYQIFTDRFSDGNPANNPTGAAFDGSCTNLRLYCGGDWQGIINKINDGYLTGMGITAIWISQPVENIYSVINYSG   91 (406)
T ss_dssp             CTTCCEEECCGGGTCCSCGGGCCCGGGBCTTCCSTTSBCCCCHHHHHHHHHTTTTGGGTCCEEEECCCEEECCCCEEETT
T ss_pred             HHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCEEEECCCCCCCCCCCCCCC
T ss_conf             30282899821113577867676666666676665564688689999744988899629989998776346554445566


Q ss_pred             ----CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             ----9998653233444444555530877889999999999999889889999964344588875431001357776443
Q batch____        52 ----YSVGYDSYDLFDLGEFDQKGSIPTKYGDKAQLLAAIDALKRNDIAVLLDVVVNHKMGADEKEAIRVQRVNADDRTQ  127 (495)
Q Consensus        52 ----~~~GY~~~dy~~~~~~~~~~~v~~~~Gt~~df~~lv~~aH~~GI~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~  127 (495)
                          .+|||++.|||         +|||+|||++|||+||++||++||+||||+|+||+|  ..+.|+............
T Consensus        92 ~~~~~~~GY~~~d~~---------~id~~~Gt~~dfk~Lv~~~H~~Gi~VilD~V~NH~s--~~~~~~~~~~~~~~~~~~  160 (406)
T d1pama4          92 VNNTAYHGYWARDFK---------KTNPAYGTMQDFKNLIDTAHAHNIKVIIDFAPNHTS--PASSDDPSFAENGRLYDN  160 (406)
T ss_dssp             EEECCTTSCSEEEEE---------EECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEE--ECCSSCTTSTTTTCEEET
T ss_pred             CCCCCCCCCCCCCCC---------CCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCC--CCCCCCCHHCCCCCCCCC
T ss_conf             676777774657454---------337343899999999999987898999976045246--876321000024655567


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf             45565455555444556666777776778640357777766675666335567667677646553034325577665678
Q batch____       128 IDEEIIECEGWTRYTFPARAGQYSQFIWDFKCFSGIDHIENPDEDGIFKIVNDYTGEGWNDQVDDELGNFDYLMGENIDF  207 (495)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~  207 (495)
                      ..........+.......                                      ..............++..++|||+
T Consensus       161 ~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~~dln~  202 (406)
T d1pama4         161 GNLLGGYTNDTQNLFHHY--------------------------------------GGTDFSTIENGIYKNLYDLADLNH  202 (406)
T ss_dssp             TEEEECSTTCTTCCBCCS--------------------------------------CBCCCSSHHHHHHSBSTTEEEBCT
T ss_pred             CCCCCCCCCCCCCCCCCC--------------------------------------CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             664666776666734666--------------------------------------777777767620068553543158


Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCC-CCCCC
Q ss_conf             99999999999999999844998899844026889999999999974169966999965078856754441147-87430
Q batch____       208 RNHAVTEEIKYWARWVMEQTQCDGFRLDAVKHIPAWFYKEWIEHVQEVAPKPLFIVAEYWSHEVDKLQTYIDQV-EGKTM  286 (495)
Q Consensus       208 ~n~~V~~~l~~~~~~w~~~~giDGfRiDa~~~v~~~f~~~~~~~~k~~~~~~~~~~gE~~~~~~~~~~~~~~~~-~~~~~  286 (495)
                      +||+|++++++++++|+ ++||||||+|++++++.++|+++++.+++..+  ++++||++....+....+.... ....+
T Consensus       203 ~~p~v~~~~~~~~~~w~-e~giDGfR~D~~~~~~~~~~~~~~~~~~~~~~--~~~~~E~~~~~~~~~~~~~~~~~~~~~~  279 (406)
T d1pama4         203 NNSSVDVYLKDAIKMWL-DLGVDGIRVDAVKHMPFGWQKSFMATINNYKP--VFTFGEWFLGVNEISPEYHQFANESGMS  279 (406)
T ss_dssp             TSHHHHHHHHHHHHHHH-HTTCCEEEETTGGGSCHHHHHHHHHHHHHHSC--CEEEECCCCCTTCCCHHHHHHHHHSSSE
T ss_pred             CCHHHHHHHHHHHHHHH-HCCCCEEEECCHHHCCHHHHHHHHHHHHHCCC--EEEEEEECCCCHHHHHHHHHCCCCCCCE
T ss_conf             98899999999999998-44997888757565898999999999851596--3999831167524534665236667712


Q ss_pred             CCCHHHHHHHHHHHCCCCCCH---HHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCE
Q ss_conf             106689999999870676210---78998743310384504896045676741011036757889999999998489827
Q batch____       287 LFDAPLQMKFHEASRMGRDYD---MTQIFTGTLVEADPFHAVTLVANHDTQPLQALEAPVEPWFKPLAYALILLRENGVP  363 (495)
Q Consensus       287 ~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~fl~nHD~~r~~~~~~~~~~~~~~la~a~~l~t~~GiP  363 (495)
                      ++|+++...++..+.......   ...+.........+...++|++|||++|+.+........+..++   ++++.||+|
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nHD~~R~~~~~~~~~~~~~a~~---~~~~~pG~P  356 (406)
T d1pama4         280 LLDFRFAQKARQVFRDNTDNMYGLKAMLEGSEVDYAQVNDQVTFIDNHDMERFHTSNGDRRKLEQALA---FTLTSRGVP  356 (406)
T ss_dssp             EBCHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHHSTTGGGCEECSCCTTSCCSCCTTSCHHHHHHHHH---HHHHSSSEE
T ss_pred             EECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHCEEECCCCCCCHHHHHCCCHHHHHHHHH---HHHHHCCCE
T ss_conf             20717999999997088877899999985234315670210431678762235430582899999999---999828971


Q ss_pred             EEECCHHCCCCCCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHCCCCC
Q ss_conf             997542408779999987552433---8089999999999997336771
Q batch____       364 SVFYPDLYGAHYEDVGGDGQTYPI---DMPIIEQLDELILARQRFAHGV  409 (495)
Q Consensus       364 ~IyyGdE~g~~~~~~~~~~~~~~~---~~~~~~~~~~L~~lR~~~~~g~  409 (495)
                      |||||||+|+.+..++.+|..+.|   +.++++++|+|++|||++|+.+
T Consensus       357 ~iy~G~E~g~~g~~d~~~r~~~~~~~~~~~~~~~~~~L~~lR~~~paL~  405 (406)
T d1pama4         357 AIYYGSEQYMSGGNDPDNRARLPSFSTTTTAYQVIQKLAPLRKSNPAIA  405 (406)
T ss_dssp             EEETTGGGTCCCCSTTGGGCCCCCCCSCSHHHHHHHHHTTHHHHCHHHH
T ss_pred             EEECCHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf             9876710150788563224547887564189999999999998762135