38 c3amkA_ Probab=100.00  E-value=0  Score=469.79  Aligned_columns=414  Identities=17%

Q ss_pred             CCCCEEEEEE--ECCCCCCCCCHHHHHHH-HHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9884599998--42686778517999985-66589749989998870027999999986532334444445555308778
Q batch____         1 MRNPTLLQCF--HWYYPEGGKLWPELAER-ADGFNDIGINMVWLPPAYKGASGGYSVGYDSYDLFDLGEFDQKGSIPTKY   77 (495)
Q Consensus         1 ~~~~~~~~~f--~~~~~~~~~~~~~i~~k-ldyl~~lGv~aIwl~Pi~~~~~~~~~~GY~~~dy~~~~~~~~~~~v~~~~   77 (495)
                      ....+|++..  .+.....-+.|+++++| |||||+||||+||||||++++... +|||++.+||         +++++|
T Consensus       173 ~~~~~iYE~hv~~~~~~~~~~~~~~~~~~~l~ylk~LGvt~I~LmPi~e~~~~~-~wGY~~~~y~---------av~~~y  242 (675)
T c3amkA_         173 PDAPRIYEAHVGMSGEEPEVSTYREFADNVLPRIRANNYNTVQLMAIMEHSYYA-SFGYHVTNFF---------AVSSRS  242 (675)
T ss_dssp             CSSCEEEEECSTTCSSSSSCCCHHHHHHHTHHHHHHTTCCEEEECSCEECSCGG-GTTCSCSEEE---------EECGGG
T ss_pred             CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC-CCCCCCCCCC---------CCCCCC
T ss_conf             545648998522247898747589999989899997599799984862688989-8576555235---------607667


Q ss_pred             CCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             89999999999999889889999964344588875431001357776443455654555554445566667777767786
Q batch____        78 GDKAQLLAAIDALKRNDIAVLLDVVVNHKMGADEKEAIRVQRVNADDRTQIDEEIIECEGWTRYTFPARAGQYSQFIWDF  157 (495)
Q Consensus        78 Gt~~df~~lv~~aH~~GI~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (495)
                      ||++|||+||++||++||+||||+|+||++....+.........+.........+..                       
T Consensus       243 Gt~~dfk~LVd~~H~~GI~VIlDvV~NH~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-----------------------  299 (675)
T c3amkA_         243 GTPEDLKYLVDKAHSLGLRVLMDVVHSHASNNVTDGLNGYDVGQNTHESYFHTGDRG-----------------------  299 (675)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEEECCSCEECCTTTSGGGGCSSCCGGGSSBCCGGGG-----------------------
T ss_pred             CCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC-----------------------
T ss_conf             899999999999998898899997125357853004453116888742334168876-----------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCC
Q ss_conf             40357777766675666335567667677646553034325577665678999999999999999998449988998440
Q batch____       158 KCFSGIDHIENPDEDGIFKIVNDYTGEGWNDQVDDELGNFDYLMGENIDFRNHAVTEEIKYWARWVMEQTQCDGFRLDAV  237 (495)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~n~~V~~~l~~~~~~w~~~~giDGfRiDa~  237 (495)
                                                            .....+.+++|++||+|+++|++++++|++++||||||+|++
T Consensus       300 --------------------------------------~~~~w~~~~~n~~~p~Vr~~i~d~~~~Wi~eygIDGfR~Dav  341 (675)
T c3amkA_         300 --------------------------------------YHKLWDSRLFNYANWEVLRFLLSNLRYWMDEFMFDGFRFDGV  341 (675)
T ss_dssp             --------------------------------------EETTTTEECBCTTSHHHHHHHHHHHHHHHHHHCCSEEEETTH
T ss_pred             --------------------------------------CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCH
T ss_conf             --------------------------------------167898521179899999999999999998629989998645


Q ss_pred             CCC--------------------------CHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCHH
Q ss_conf             268--------------------------899999999999741699669999650788567544411478743010668
Q batch____       238 KHI--------------------------PAWFYKEWIEHVQEVAPKPLFIVAEYWSHEVDKLQTYIDQVEGKTMLFDAP  291 (495)
Q Consensus       238 ~~v--------------------------~~~f~~~~~~~~k~~~~~~~~~~gE~~~~~~~~~~~~~~~~~~~~~~~d~~  291 (495)
                      ++|                          ..+||+++.+.+++..| +++++||.|.+.+.........+.+++..+++.
T Consensus       342 ~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~i~~~~p-~~~~iaE~~~~~~~~~~~~~~gg~gfd~~~~~~  420 (675)
T c3amkA_         342 TSMLYHHHGINKGFTGNYKEYFSLDTDVDAIVYMMLANHLMHKLLP-EATIVAEDVSGMPVLCRPVDEGGVGFDFRLAMA  420 (675)
T ss_dssp             HHHHBTTTTTTCCCCSCHHHHSSTTBCHHHHHHHHHHHHHHHHHCT-TCEEEECCSSCCTTTTSCGGGTSCCCSEEECTT
T ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CEEEEEEEECCCHHHHCCCCCCCCCCCEEECCH
T ss_conf             5303233456554444443334665663358999999999988669-869997440786345000114798701011736


Q ss_pred             HHHHHHHHHCCCCCCH--HHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHCCCCC------------------HHHHHHH
Q ss_conf             9999999870676210--7899874331038450489604567674101103675------------------7889999
Q batch____       292 LQMKFHEASRMGRDYD--MTQIFTGTLVEADPFHAVTLVANHDTQPLQALEAPVE------------------PWFKPLA  351 (495)
Q Consensus       292 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~fl~nHD~~r~~~~~~~~~------------------~~~~~la  351 (495)
                      ++..++..+.+.....  ...+.........+..+++|++|||+.|+........                  ....+++
T Consensus       421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~enHD~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  500 (675)
T c3amkA_         421 IPDRWIDYLKNKEDRKWSMSEIVQTLTNRRYTEKCIAYAESHDDKTIAFLLMDKEMYTGMSDLQPASPTINRGIALQKMI  500 (675)
T ss_dssp             HHHHHHHHHHHCCGGGCCHHHHHHHHHCSCTTSCEEBCSCCCCCCCHHHHHHGGGHHHHTBTTSCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             88999998634853013688888666237682016996100686620001263233100002445786779999999999


Q ss_pred             HHHHHHHCCCCEEEECCHHCCC--------CCCCCCCCCCCCCCC---------CHHHHHHHHHHHHHHHCCC---CCEE
Q ss_conf             9999984898279975424087--------799999875524338---------0899999999999973367---7148
Q batch____       352 YALILLRENGVPSVFYPDLYGA--------HYEDVGGDGQTYPID---------MPIIEQLDELILARQRFAH---GVQT  411 (495)
Q Consensus       352 ~a~~l~t~~GiP~IyyGdE~g~--------~~~~~~~~~~~~~~~---------~~~~~~~~~L~~lR~~~~~---g~~~  411 (495)
                      +++++++.++.|+||||+|+|+        .+..+..++....|+         ..+++++|+|++||+++++   |...
T Consensus       501 ~~~~l~~~G~p~liy~G~E~G~~~~~d~~~~~~~~~~~~~~~~w~~~~~~~~~~~~L~~f~k~Li~LRk~~paL~~g~~~  580 (675)
T c3amkA_         501 HFITMALGGDGYLNFMGNEFGHPEWIDFPREGNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALEEEFSFLSSSKQI  580 (675)
T ss_dssp             HHHHHHHHCSSEEEETTGGGTCCSCCCCCCGGGTSCCTTSSCCHHHHHCTTBSHHHHHHHHHHHHHHHHHHCGGGCCCEE
T ss_pred             HHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf             99999948983178401011465788865457688855466587753333332379999999999998748302078289


Q ss_pred             EEEECCC--EEEEEEEECCCCEEEEEEEECCCCCE-EEEEECCCCCCCEEEEEECCC-----------------CCCEEE
Q ss_conf             8971699--79999974798706999997389950-899930568985899731589-----------------762797
Q batch____       412 LFFDHPN--CIAFSRSGTDEFPGCVVVMSNGDDGE-KTIHLGENYGNKTWRDFLGNR-----------------QERVVT  471 (495)
Q Consensus       412 ~~~~~~~--v~~f~R~~~~~~~~~~vv~nn~~~~~-~~~~v~~~~~g~~~~d~l~~~-----------------~~~v~~  471 (495)
                      ....+.+  |++|.|      ..++||+|++.... ..+.|++..+| +|+.++...                 ......
T Consensus       581 ~~~~~~~~~Viaf~R------~~llvV~N~~~~~~~~~~~i~~p~~G-~y~~ilnSd~~~ygG~~~~~~~~~~~~~~~~~  653 (675)
T c3amkA_         581 VSDMNEKDKVIVFER------GDLVFVFNFHPNKTYKGYKVGCDLPG-KYRVALDSDALVFGGHGRVGHDVDHFTSPEGM  653 (675)
T ss_dssp             EEEEETTTTEEEEEE------TTEEEEEECCSSCCEEEEEEEESSCS-EEEEEEETTSGGGTCCCCSCSSCCEECEECCC
T ss_pred             EEEECCCCCEEEEEE------CCEEEEEECCCCCEEEEEEEECCCCC-EEEEEEECCCHHCCCCCCCCCCCCCCCCCCCC
T ss_conf             996338984999998------88899997649852433784328996-59998507520308877566652001445547


Q ss_pred             CCCCEEEEEECCCEEEEEEEHH
Q ss_conf             7894799998894599987411
Q batch____       472 DENGEATFFCNGGSVSVWVIEE  493 (495)
Q Consensus       472 ~~~G~~~~~v~~~s~~V~~~~~  493 (495)
                      +..++++++|||+|+.|+++.|
T Consensus       654 ~~~~~~~i~lPp~s~~Vl~~~d  675 (675)
T c3amkA_         654 NRPNSFKVLSPPRTCVAYYRVD  675 (675)
T ss_dssp             CCSEEEEEEECTTEEEEEEECC
T ss_pred             CCCCEEEEEECCCEEEEEEECC
T ss_conf             8440289993892589998378