125 c3a5vA_ Probab=98.27   E-value=0.00044  Score=45.91  Aligned_columns=344  Identities=12%

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHH-----CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             2686778517999985665897-----49989998870027999999986532334444445555308778899999999
Q batch____        12 WYYPEGGKLWPELAERADGFND-----IGINMVWLPPAYKGASGGYSVGYDSYDLFDLGEFDQKGSIPTKYGDKAQLLAA   86 (495)
Q Consensus        12 ~~~~~~~~~~~~i~~kldyl~~-----lGv~aIwl~Pi~~~~~~~~~~GY~~~dy~~~~~~~~~~~v~~~~Gt~~df~~l   86 (495)
                      |+.=...-..+.|.+.+|.+++     +|++.|-|           +-|+.....-..+.......-=|.     .|++|
T Consensus        16 W~~~~~~i~e~~i~~~~d~~~~~gl~~~G~~yi~i-----------DdGW~~~~~~~~G~~~~~~~kFP~-----Glk~l   79 (397)
T c3a5vA_          16 WNKYGCNVDEQLILDAAKAIASSGLKDLGYNYVII-----------DDCWQKNERESSKTLLADPTKFPR-----GIKPL   79 (397)
T ss_dssp             HHHHGGGCCHHHHHHHHHHHHHHTHHHHTCCEEEC-----------CSSCBCSSCCTTSCCCBCTTTCTT-----CHHHH
T ss_pred             HHHHCCCCCHHHHHHHHHHHHHCCCHHHCCEEEEE-----------CCCCCCCCCCCCCCCCCCCCCCCC-----CHHHH
T ss_conf             88722236999999999999872971509529997-----------388867654656652206131553-----17999


Q ss_pred             HHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99999889889999964344588875431001357776443455654555554445566667777767786403577777
Q batch____        87 IDALKRNDIAVLLDVVVNHKMGADEKEAIRVQRVNADDRTQIDEEIIECEGWTRYTFPARAGQYSQFIWDFKCFSGIDHI  166 (495)
Q Consensus        87 v~~aH~~GI~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (495)
                      ++.+|++|+++-+=..+....                                                           
T Consensus        80 ~d~i~~~G~k~Gi~~~~g~~~-----------------------------------------------------------  100 (397)
T c3a5vA_          80 VDDIHNLGLKAGIYSSAGTLT-----------------------------------------------------------  100 (397)
T ss_dssp             HHHHHHTTCEEEEEEESSSBC-----------------------------------------------------------
T ss_pred             HHHHHHCCCCCCEEEECCCCC-----------------------------------------------------------
T ss_conf             999997497353687146445-----------------------------------------------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCC--------C
Q ss_conf             66675666335567667677646553034325577665678999999999999999998449988998440--------2
Q batch____       167 ENPDEDGIFKIVNDYTGEGWNDQVDDELGNFDYLMGENIDFRNHAVTEEIKYWARWVMEQTQCDGFRLDAV--------K  238 (495)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~n~~V~~~l~~~~~~w~~~~giDGfRiDa~--------~  238 (495)
                                                             ...+|..+.++...++.+.+- |||++.+|..        .
T Consensus       101 ---------------------------------------~~~~pg~~~~~~~~~~~~~~~-Gvd~iK~D~~~~~~~~~~~  140 (397)
T c3a5vA_         101 ---------------------------------------CGGHIASLGYEDIDAKTWAKW-GIDYLKYDNCYNQGQSGTP  140 (397)
T ss_dssp             ---------------------------------------TTSCBCCTTCHHHHHHHHHHH-TCCEEEEECTTCTTCCSSH
T ss_pred             ---------------------------------------CCCCHHHHHHHHHHHHHHHHC-CCCEEEECCCCCCCCCCCC
T ss_conf             ---------------------------------------476821223689999999724-9675854287786546775


Q ss_pred             CCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHH-------HHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHH
Q ss_conf             6889999999999974169966999965078856754-------441147874301066899999998706762107899
Q batch____       239 HIPAWFYKEWIEHVQEVAPKPLFIVAEYWSHEVDKLQ-------TYIDQVEGKTMLFDAPLQMKFHEASRMGRDYDMTQI  311 (495)
Q Consensus       239 ~v~~~f~~~~~~~~k~~~~~~~~~~gE~~~~~~~~~~-------~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~  311 (495)
                      ....+.+..+.+++.+...+-++.+-..-...+-...       ......................+.........+...
T Consensus       141 ~~~~~~y~~~~~al~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~R~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (397)
T c3a5vA_         141 KLSYDRYKAMGNALNKTGRPMLYSLCNWGEDGPWNFASTISNSWRISGDVYDNFNRPDPACPCTTYDCVLAGFRCSVMNI  220 (397)
T ss_dssp             HHHHHHHHHHHHHHHHTCSCCEEEECSTTTTCHHHHSTTTCSEEECSSCBCSCSSCCCTTSCCCSSCCSCCCSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf             45799999999999872992999813888874124664115368981066788786311123343222344303668876


Q ss_pred             HHHHHHCCCCCEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             87433103845048960456767410110367578899999999984898279975424087799999875524338089
Q batch____       312 FTGTLVEADPFHAVTLVANHDTQPLQALEAPVEPWFKPLAYALILLRENGVPSVFYPDLYGAHYEDVGGDGQTYPIDMPI  391 (495)
Q Consensus       312 ~~~~~~~~~~~~~v~fl~nHD~~r~~~~~~~~~~~~~~la~a~~l~t~~GiP~IyyGdE~g~~~~~~~~~~~~~~~~~~~  391 (495)
                      ...............+ .--|..............+..+++-.+    -|-|+|...|.-              ....+.
T Consensus       221 ~~~~~~~~~~~~~~~~-~D~D~l~~~~~~~t~~e~r~~~a~w~i----~~spl~~~~d~~--------------~~~~~~  281 (397)
T c3a5vA_         221 INKAVAVSQKARSGGW-NDLDMLEVGNGGMNQEEYRVHYTIWAA----LKSPLILGNDVT--------------NITNTT  281 (397)
T ss_dssp             HHHHHHHGGGCBTTBE-EECCCBCTTSSSSCHHHHHHHHHHHHH----TTCCEEECSCSS--------------SCCHHH
T ss_pred             HHHHHHHHHHCCCCCC-CCHHHEECCCCCCCHHHHHHHHHHHHH----HHCCEEECCCCC--------------CCCHHH
T ss_conf             7653555430586878-841212237888888899999999999----727354147732--------------189889


Q ss_pred             HHHH--HHHHHHHHHCCCCCEEEEEECCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCCC------------E
Q ss_conf             9999--9999999733677148897169979999974798706999997389950899930568985------------8
Q batch____       392 IEQL--DELILARQRFAHGVQTLFFDHPNCIAFSRSGTDEFPGCVVVMSNGDDGEKTIHLGENYGNK------------T  457 (495)
Q Consensus       392 ~~~~--~~L~~lR~~~~~g~~~~~~~~~~v~~f~R~~~~~~~~~~vv~nn~~~~~~~~~v~~~~~g~------------~  457 (495)
                      .+.+  +.++++++..............+.-++.+...+..  .+|++.|..+..+++++.....+.            .
T Consensus       282 ~~~l~n~~~i~i~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~va~~N~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~  359 (397)
T c3a5vA_         282 KEIIMNKEVIAVNQDSSFSPANRIWVKGDQQLFSGNLANNT--QVVILLNAGDSAAKMTATWDDIWVYNLPNVDSSRSIE  359 (397)
T ss_dssp             HHHHCCHHHHHHHTCTTCCCCEEEEEETTEEEEEEEETTTE--EEEEEEECSSSCEEEEEEHHHHTGGGTTSBCTTCCEE
T ss_pred             HHHHCCHHHHHCCCCCCCCCCCEEECCCCCEEEEEECCCCC--EEEEEEECCCCCEEEEEEHHHCCCCCCCCCCCCCCEE
T ss_conf             98730754431044556556731113688259999858995--8999996799837789877450444444656787289


Q ss_pred             EEEEECCCCCCEEECCCCEEEEEECCCEEEEEEEHHC
Q ss_conf             9973158976279778947999988945999874110
Q batch____       458 WRDFLGNRQERVVTDENGEATFFCNGGSVSVWVIEEV  494 (495)
Q Consensus       458 ~~d~l~~~~~~v~~~~~G~~~~~v~~~s~~V~~~~~~  494 (495)
                      .+|+..+.....   ..|.++++|+|++++|+-+..+
T Consensus       360 v~Dlw~~~~~~~---~~~~~t~~L~p~~~~~~r~~~~  393 (397)
T c3a5vA_         360 VRDLWKQKSLGN---FSNHITLDVPAHGVRLLKFMDS  393 (397)
T ss_dssp             EEETTTTEEEEE---ECSEEEEEECTTEEEEEEESSC
T ss_pred             EEEEECCCEECC---CCCEEEEEECCCCEEEEEEEEC
T ss_conf             999535822102---3650899988885799998106