24 c1cygA_ Probab=100.00  E-value=0  Score=510.15  Aligned_columns=433  Identities=20%

Q ss_pred             CCCEEEEEEECCCCCCC----------------------CCHHHHHHHHH--HHHHCCCCEEEECCCCCCCCCCC-----
Q ss_conf             88459999842686778----------------------51799998566--58974998999887002799999-----
Q batch____         2 RNPTLLQCFHWYYPEGG----------------------KLWPELAERAD--GFNDIGINMVWLPPAYKGASGGY-----   52 (495)
Q Consensus         2 ~~~~~~~~f~~~~~~~~----------------------~~~~~i~~kld--yl~~lGv~aIwl~Pi~~~~~~~~-----   52 (495)
                      ++.||+|.|-..-..+-                      |.++||++|||  |||+||||+||||||+|+.....     
T Consensus        10 ~~~~iY~i~~drF~~g~~~~~~~~~~~~~~~~~~~~~~gGd~~gi~~kLd~pYl~~LGv~~i~l~P~~~~~~~~~~~~~~   89 (680)
T c1cygA_          10 TSDVVYQIVVDRFVDGNTSNNPSGALFSSGCTNLRKYCGGDWQGIINKINDGYLTDMGVTAIWISQPVENVFSVMNDASG   89 (680)
T ss_dssp             TTCCEEEECGGGTCCSCGGGCCCGGGBCGGGCSTTSBCCCCHHHHHHHHHTSTTTTTTCCEEEECCCEEECCCCCSSSSC
T ss_pred             CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHCCCCEEEECCCCCCCCCCCCCCCC
T ss_conf             15746999320013788888876655666765544415785999997628877997299899987751466655556667


Q ss_pred             ---CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             ---99865323344444455553087788999999999999988988999996434458887543100135777644345
Q batch____        53 ---SVGYDSYDLFDLGEFDQKGSIPTKYGDKAQLLAAIDALKRNDIAVLLDVVVNHKMGADEKEAIRVQRVNADDRTQID  129 (495)
Q Consensus        53 ---~~GY~~~dy~~~~~~~~~~~v~~~~Gt~~df~~lv~~aH~~GI~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~  129 (495)
                         +|||++.||+         +|||+|||++|||+||++||+||||||||+|+||+|                  ....
T Consensus        90 ~~~~~GY~~~d~~---------~id~~~Gt~~dfk~lV~~aH~~Gi~VilD~V~NH~s------------------~~~~  142 (680)
T c1cygA_          90 SASYHGYWARDFK---------KPNPFFGTLSDFQRLVDAAHAKGIKVIIDFAPNHTS------------------PASE  142 (680)
T ss_dssp             CCSTTSCSEEEEE---------EECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEE------------------ECCS
T ss_pred             CCCCCCCCCCCCC---------CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCC------------------CCCC
T ss_conf             6777775656243---------356332899999999999998898899999623368------------------8775


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf             56545555544455666677777677864035777776667566633556766767764655303432557766567899
Q batch____       130 EEIIECEGWTRYTFPARAGQYSQFIWDFKCFSGIDHIENPDEDGIFKIVNDYTGEGWNDQVDDELGNFDYLMGENIDFRN  209 (495)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~n  209 (495)
                      ..+........+........+......+++..                      ..+......+..++.+..++|||++|
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~dln~~n  200 (680)
T c1cygA_         143 TNPSYMENGRLYDNGTLLGGYTNDANMYFHHN----------------------GGTTFSSLEDGIYRNLFDLADLNHQN  200 (680)
T ss_dssp             SCTTSTTTTCEEETTEEEECSTTCTTCCBCCS----------------------CBCCCSSHHHHHSSBSTTEEEBCTTS
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----------------------CCCCCCCCCCCEECCCCCCCCCCCCC
T ss_conf             43200015734546530467887656653366----------------------88755665631005778888546899


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHH-HHHHHCCCCCCCCCC
Q ss_conf             9999999999999998449988998440268899999999999741699669999650788567-544411478743010
Q batch____       210 HAVTEEIKYWARWVMEQTQCDGFRLDAVKHIPAWFYKEWIEHVQEVAPKPLFIVAEYWSHEVDK-LQTYIDQVEGKTMLF  288 (495)
Q Consensus       210 ~~V~~~l~~~~~~w~~~~giDGfRiDa~~~v~~~f~~~~~~~~k~~~~~~~~~~gE~~~~~~~~-~~~~~~~~~~~~~~~  288 (495)
                      |+|+++|++++++|+ ++||||||||+++|++.+||++++++++...+  .++++|+|...... ............+++
T Consensus       201 ~~v~~~~~~~~~~w~-~~giDGfR~D~~~~~~~~~~~~~~~~~~~~~~--~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  277 (680)
T c1cygA_         201 PVIDRYLKDAVKMWI-DMGIDGIRMDAVKHMPFGWQKSLMDEIDNYRP--VFTFGEWFLSENEVDANNHYFANESGMSLL  277 (680)
T ss_dssp             HHHHHHHHHHHHHHH-TTTCCEEEESCGGGSCSHHHHHHHHHHHHHCC--CEEEECCCCCTTCCCHHHHHHHHHSSCEEB
T ss_pred             HHHHHHHHHHHHHHH-HCCCCEEEECCCCCCCHHHHHHHHHHHHHHCC--EEEEEEEECCCCCCCCHHHHHCCCCCCEEE
T ss_conf             999999999999998-44588377614103899899999999862188--089998644775322013330367771454


Q ss_pred             CHHHHHHHHHHHCCCCC--CHHHHHHHHHHHCC-CCCEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf             66899999998706762--10789987433103-8450489604567674101103675788999999999848982799
Q batch____       289 DAPLQMKFHEASRMGRD--YDMTQIFTGTLVEA-DPFHAVTLVANHDTQPLQALEAPVEPWFKPLAYALILLRENGVPSV  365 (495)
Q Consensus       289 d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~v~fl~nHD~~r~~~~~~~~~~~~~~la~a~~l~t~~GiP~I  365 (495)
                      |++++..+++.+.....  ..+...+....... .+..+++|++|||++|+.+........+..++   ++|+.||+|+|
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~nHD~~R~~~~~~~~~~~~~a~~---~~l~~pG~P~i  354 (680)
T c1cygA_         278 DFRFGQKLRQVLRNNSDNWYGFNQMIQDTASAYDEVLDQVTFIDNHDMDRFMIDGGDPRKVDMALA---VLLTSRGVPNI  354 (680)
T ss_dssp             CHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHCTTGGGCEECSCCTTSCCSCCTTCCTHHHHHHHH---HHHHSSSEEEE
T ss_pred             CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHH---HHHHHCCCEEE
T ss_conf             207999999986048778999999998876418862432896057875503231799999999999---99990897199


Q ss_pred             ECCHHCCCCCCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHCCC---CCEEEEEECCCEEEEEEEECCCCEEEEEEEEC
Q ss_conf             7542408779999987552433---80899999999999973367---71488971699799999747987069999973
Q batch____       366 FYPDLYGAHYEDVGGDGQTYPI---DMPIIEQLDELILARQRFAH---GVQTLFFDHPNCIAFSRSGTDEFPGCVVVMSN  439 (495)
Q Consensus       366 yyGdE~g~~~~~~~~~~~~~~~---~~~~~~~~~~L~~lR~~~~~---g~~~~~~~~~~v~~f~R~~~~~~~~~~vv~nn  439 (495)
                      |||||+|+.+..++.+|..+.+   +.++++++|+|++|||++++   |.+...+.++++++|.|...++.  ++||+|+
T Consensus       355 yyG~E~g~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~~lR~~~~al~~G~~~~~~~~~~v~af~R~~~~~~--~~v~~N~  432 (680)
T c1cygA_         355 YYGTEQYMTGNGDPNNRKMMSSFNKNTRAYQVIQKLSSLRRNNPALAYGDTEQRWINGDVYVYERQFGKDV--VLVAVNR  432 (680)
T ss_dssp             ETTGGGTCCCCSTTGGGCCCCCCCSCSHHHHHHHHHHHHHHHCHHHHHCEEEEEEECSSEEEEEEEETTEE--EEEEEEC
T ss_pred             ECCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHCCEEEEEEECCCEEEEEEECCCCE--EEEECCC
T ss_conf             95635243687686543215889888589999999999987683221571789950794899999629942--9984045


Q ss_pred             CCCCEEEE-EECCCCCCCEEEEEECCCCCC---EEECCCCEEEEEECCCEEEEEEE
Q ss_conf             89950899-930568985899731589762---79778947999988945999874
Q batch____       440 GDDGEKTI-HLGENYGNKTWRDFLGNRQER---VVTDENGEATFFCNGGSVSVWVI  491 (495)
Q Consensus       440 ~~~~~~~~-~v~~~~~g~~~~d~l~~~~~~---v~~~~~G~~~~~v~~~s~~V~~~  491 (495)
                      +......+ .+....+.+++.+.+++....   .+....+..++++++.++.++..
T Consensus       433 ~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~~~t~~~~~~~~t~~~~~~~~~~~~~  488 (680)
T c1cygA_         433 SSSSNYSITGLFTALPAGTYTDQLGGLLDGNTIQVGSNGSVNAFDLGPGEVGVWAY  488 (680)
T ss_dssp             CSSCCEEECSCBCSSCSEEECCTTTTTTCCCCEEECGGGBBCCEEECTTCEEEEEE
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCEEEEC
T ss_conf             55554311222223221222210013455520232045640356406775200002