Phyre 2 alignment of P76007 with c3r6dA_

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Job Description | P76007
Confidence | 16.92% | Date | Thu Jan 5 12:17:17 GMT 2012
Rank | 54 | Aligned Residues | 39
% Identity | 8% | Template | c3r6dA_
PDB info | PDB header:lyase, isomerase | Chain: A: PDB Molecule:nad-dependent epimerase/dehydratase; | PDBTitle: crystal structure of nad-dependent epimerase/dehydratase from2 veillonella parvula dsm 2008 with cz-methylated lysine
Resolution | 1.25 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 413 | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | P | W | E | Q | F | V | Y | Q | L | S | A | D | K | W | C | V | G | A | A | L | R | D | L | H | M | P | K | E | T | R | I | A | A | L | F | R | D | N | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | N | A | X | Y | Y | I | T | I | L | G | A | A | G | Q | I | A | Q | L | T | A | T | L | L | T | Y | T | D | X | H | I | T | L | Y | G | R | Q | L | K
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | S | T | T | S | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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