Phyre 2 Results for P76007

Email | l.a.kelley@imperial.ac.uk
Description | P76007
Date | Thu Jan 5 12:17:17 GMT 2012
Unique Job ID | c64e74c953cdb402

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c1zcdA_ |
|  | 99.9 | 14 | PDB header:membrane protein Chain: A: PDB Molecule:na(+)/h(+) antiporter 1; PDBTitle: crystal structure of the na+/h+ antiporter nhaa
2 | c3jxoB_ |
|  | 99.3 | 30 | PDB header:transport protein Chain: B: PDB Molecule:trka-n domain protein; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima
3 | d1vcta2 |
|  | 98.8 | 21 | Fold:TrkA C-terminal domain-like Superfamily:TrkA C-terminal domain-like Family:TrkA C-terminal domain-like
4 | c2bknA_ |
|  | 98.8 | 18 | PDB header:membrane protein Chain: A: PDB Molecule:hypothetical protein ph0236; PDBTitle: structure analysis of unknown function protein
5 | d2fy8a2 |
|  | 98.8 | 18 | Fold:TrkA C-terminal domain-like Superfamily:TrkA C-terminal domain-like Family:TrkA C-terminal domain-like
6 | c2fy8A_ |
|  | 98.5 | 18 | PDB header:transport protein Chain: A: PDB Molecule:calcium-gated potassium channel mthk; PDBTitle: crystal structure of mthk rck domain in its ligand-free gating-ring2 form
7 | c1lnqC_ |
|  | 98.5 | 18 | PDB header:metal transport Chain: C: PDB Molecule:potassium channel related protein; PDBTitle: crystal structure of mthk at 3.3 a
8 | c3l4bG_ |
|  | 98.2 | 32 | PDB header:transport protein Chain: G: PDB Molecule:trka k+ channel protien tm1088b; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima
9 | d3deda1 |
|  | 97.9 | 23 | Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like
10 | d2o1ra1 |
|  | 97.8 | 24 | Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like
11 | d2plia1 |
|  | 97.8 | 25 | Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like
12 | d2p13a1 |
|  | 97.7 | 18 | Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like
13 | c3llbA_ |
|  | 97.7 | 23 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of the protein pa3983 with unknown2 function from pseudomonas aeruginosa pao1
14 | c3dedB_ |
|  | 97.6 | 25 | PDB header:membrane protein Chain: B: PDB Molecule:probable hemolysin; PDBTitle: c-terminal domain of probable hemolysin from chromobacterium violaceum
15 | d2o3ga1 |
|  | 97.6 | 23 | Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like
16 | d2plsa1 |
|  | 97.4 | 23 | Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like
17 | d2nqwa1 |
|  | 97.4 | 21 | Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like
18 | d2oaia1 |
|  | 97.3 | 18 | Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like
19 | d2rk5a1 |
|  | 97.2 | 15 | Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like
20 | d2r2za1 |
|  | 97.1 | 15 | Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like
21 | c3mt5A_ |
| not modelled | 96.8 | 11 | PDB header:membrane protein, transport protein Chain: A: PDB Molecule:potassium large conductance calcium-activated channel, PDBTitle: crystal structure of the human bk gating apparatus
22 | d2p3ha1 |
| not modelled | 96.0 | 18 | Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like
23 | c3u6nC_ |
| not modelled | 95.4 | 10 | PDB header:transport protein Chain: C: PDB Molecule:high-conductance ca2+-activated k+ channel protein; PDBTitle: open structure of the bk channel gating ring
24 | d2p4pa1 |
| not modelled | 93.8 | 9 | Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:CorC/HlyC domain-like
25 | c3eywA_ |
| not modelled | 92.3 | 11 | PDB header:transport protein Chain: A: PDB Molecule:c-terminal domain of glutathione-regulated potassium-efflux PDBTitle: crystal structure of the c-terminal domain of e. coli kefc in complex2 with keff
26 | c2l0eA_ |
| not modelled | 88.8 | 27 | PDB header:membrane protein Chain: A: PDB Molecule:sodium/hydrogen exchanger 1; PDBTitle: structural and functional analysis of tm vi of the nhe1 isoform of the2 na+/h+ exchanger
27 | d1lssa_ |
| not modelled | 88.2 | 15 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Potassium channel NAD-binding domain
28 | c2g1uA_ |
| not modelled | 78.4 | 19 | PDB header:transport protein Chain: A: PDB Molecule:hypothetical protein tm1088a; PDBTitle: crystal structure of a putative transport protein (tm1088a) from2 thermotoga maritima at 1.50 a resolution
29 | c3llvA_ |
| not modelled | 78.2 | 16 | PDB header:nad(p) binding protein Chain: A: PDB Molecule:exopolyphosphatase-related protein; PDBTitle: the crystal structure of the nad(p)-binding domain of an2 exopolyphosphatase-related protein from archaeoglobus fulgidus to3 1.7a
30 | c3fwzA_ |
| not modelled | 74.4 | 10 | PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli
31 | d1id1a_ |
| not modelled | 65.7 | 13 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Potassium channel NAD-binding domain
32 | c2kbvA_ |
| not modelled | 53.0 | 35 | PDB header:membrane protein Chain: A: PDB Molecule:sodium/hydrogen exchanger 1; PDBTitle: structural and functional analysis of tm xi of the nhe12 isoform of the na+/h+ exchanger
33 | c2khaA_ |
| not modelled | 48.2 | 12 | PDB header:sugar binding protein Chain: A: PDB Molecule:beta-1,3-glucan-binding protein; PDBTitle: solution structure of a pathogen recognition domain from a2 lepidopteran insect, plodia interpunctella
34 | c3ie4A_ |
| not modelled | 47.2 | 16 | PDB header:immune system Chain: A: PDB Molecule:gram-negative binding protein 3; PDBTitle: b-glucan binding domain of drosophila gnbp3 defines a novel2 family of pattern recognition receptor
35 | c2rqeA_ |
| not modelled | 44.9 | 12 | PDB header:sugar binding protein Chain: A: PDB Molecule:beta-1,3-glucan-binding protein; PDBTitle: solution structure of the silkworm bgrp/gnbp3 n-terminal2 domain reveals the mechanism for b-1,3-glucan specific3 recognition
36 | d2fy8a1 |
| not modelled | 43.5 | 17 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Potassium channel NAD-binding domain
37 | d2c5aa1 |
| not modelled | 41.9 | 8 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
38 | d1tygb_ |
| not modelled | 38.4 | 14 | Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS
39 | d1pjqa1 |
| not modelled | 36.2 | 12 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Siroheme synthase N-terminal domain-like
40 | c1tygG_ |
| not modelled | 35.6 | 15 | PDB header:biosynthetic protein Chain: G: PDB Molecule:yjbs; PDBTitle: structure of the thiazole synthase/this complex
41 | c3nafA_ |
| not modelled | 35.6 | 12 | PDB header:ion transport Chain: A: PDB Molecule:calcium-activated potassium channel subunit alpha-1; PDBTitle: structure of the intracellular gating ring from the human high-2 conductance ca2+ gated k+ channel (bk channel)
42 | d2hmva1 |
| not modelled | 35.1 | 9 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Potassium channel NAD-binding domain
43 | c3dqpA_ |
| not modelled | 29.4 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase ylbe; PDBTitle: crystal structure of the oxidoreductase ylbe from2 lactococcus lactis, northeast structural genomics3 consortium target kr121.
44 | d1hdoa_ |
| not modelled | 29.1 | 11 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
45 | d1e5qa1 |
| not modelled | 28.5 | 4 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
46 | c2kl0A_ |
| not modelled | 25.5 | 14 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative thiamin biosynthesis this; PDBTitle: solution nmr structure of rhodopseudomonas palustris rpa3574,2 northeast structural genomics consortium (nesg) target rpr325
47 | c3cwiA_ |
| not modelled | 21.1 | 15 | PDB header:biosynthetic protein Chain: A: PDB Molecule:thiamine-biosynthesis protein this; PDBTitle: crystal structure of thiamine biosynthesis protein (this)2 from geobacter metallireducens. northeast structural3 genomics consortium target gmr137
48 | d1zud21 |
| not modelled | 19.5 | 21 | Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS
49 | c3c85A_ |
| not modelled | 19.2 | 9 | PDB header:transport protein Chain: A: PDB Molecule:putative glutathione-regulated potassium-efflux system PDBTitle: crystal structure of trka domain of putative glutathione-regulated2 potassium-efflux kefb from vibrio parahaemolyticus
50 | d1b0aa1 |
| not modelled | 18.8 | 9 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain
51 | d1x5qa1 |
| not modelled | 18.4 | 14 | Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain
52 | d1edza1 |
| not modelled | 17.1 | 14 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain
53 | d1g9oa_ |
| not modelled | 17.0 | 18 | Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain
54 | c3r6dA_ |
| not modelled | 16.9 | 8 | PDB header:lyase, isomerase Chain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: crystal structure of nad-dependent epimerase/dehydratase from2 veillonella parvula dsm 2008 with cz-methylated lysine
55 | c3bpuA_ |
| not modelled | 16.1 | 19 | PDB header:transferase Chain: A: PDB Molecule:membrane-associated guanylate kinase, ww and pdz domain- PDBTitle: crystal structure of the 3rd pdz domain of human membrane associated2 guanylate kinase, c677s and c709s double mutant
56 | d1g7sa2 |
| not modelled | 15.6 | 14 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Translation proteins Family:Elongation factors
57 | c3icpA_ |
| not modelled | 15.3 | 12 | PDB header:isomerase Chain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: crystal structure of udp-galactose 4-epimerase
58 | c3l77A_ |
| not modelled | 15.3 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:short-chain alcohol dehydrogenase; PDBTitle: x-ray structure alcohol dehydrogenase from archaeon thermococcus2 sibiricus complexed with 5-hydroxy-nadp
59 | c1edzA_ |
| not modelled | 15.0 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:5,10-methylenetetrahydrofolate dehydrogenase; PDBTitle: structure of the nad-dependent 5,10-2 methylenetetrahydrofolate dehydrogenase from saccharomyces3 cerevisiae
60 | d2cu3a1 |
| not modelled | 14.5 | 26 | Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS
61 | c3htrB_ |
| not modelled | 14.5 | 16 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized prc-barrel domain protein; PDBTitle: crystal structure of prc-barrel domain protein from2 rhodopseudomonas palustris
62 | c3k8hA_ |
| not modelled | 14.2 | 14 | PDB header:membrane protein Chain: A: PDB Molecule:30klp; PDBTitle: structure of crystal form i of tp0453
63 | c2vspA_ |
| not modelled | 14.1 | 15 | PDB header:transport protein Chain: A: PDB Molecule:pdz domain-containing protein 1; PDBTitle: crystal structure of the fourth pdz domain of pdz domain-2 containing protein 1
64 | c3r3sD_ |
| not modelled | 13.2 | 8 | PDB header:oxidoreductase Chain: D: PDB Molecule:oxidoreductase; PDBTitle: structure of the ygha oxidoreductase from salmonella enterica
65 | c2pk3B_ |
| not modelled | 13.2 | 13 | PDB header:oxidoreductase Chain: B: PDB Molecule:gdp-6-deoxy-d-lyxo-4-hexulose reductase; PDBTitle: crystal structure of a gdp-4-keto-6-deoxy-d-mannose reductase
66 | c2x4gA_ |
| not modelled | 13.1 | 9 | PDB header:isomerase Chain: A: PDB Molecule:nucleoside-diphosphate-sugar epimerase; PDBTitle: crystal structure of pa4631, a nucleoside-diphosphate-sugar2 epimerase from pseudomonas aeruginosa
67 | d1yjma1 |
| not modelled | 13.1 | 36 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain
68 | d1tp5a1 |
| not modelled | 13.1 | 16 | Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain
69 | c2q1wC_ |
| not modelled | 12.9 | 5 | PDB header:sugar binding protein Chain: C: PDB Molecule:putative nucleotide sugar epimerase/ dehydratase; PDBTitle: crystal structure of the bordetella bronchiseptica enzyme wbmh in2 complex with nad+
70 | d2piea1 |
| not modelled | 12.8 | 19 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain
71 | d2i0ia1 |
| not modelled | 12.5 | 18 | Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain
72 | c1yj5C_ |
| not modelled | 12.3 | 38 | PDB header:transferase Chain: C: PDB Molecule:5' polynucleotide kinase-3' phosphatase fha domain; PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme
73 | d1a4ia1 |
| not modelled | 12.3 | 15 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain
74 | d1wvga1 |
| not modelled | 12.1 | 13 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
75 | c3dhnA_ |
| not modelled | 11.9 | 19 | PDB header:isomerase, lyase Chain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: crystal structure of the putative epimerase q89z24_bactn2 from bacteroides thetaiotaomicron. northeast structural3 genomics consortium target btr310.
76 | d2f1ka2 |
| not modelled | 11.8 | 10 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
77 | c3ctmH_ |
| not modelled | 11.5 | 8 | PDB header:oxidoreductase Chain: H: PDB Molecule:carbonyl reductase; PDBTitle: crystal structure of a carbonyl reductase from candida2 parapsilosis with anti-prelog stereo-specificity
78 | c3h2sA_ |
| not modelled | 11.2 | 18 | PDB header:oxidoreductase Chain: A: PDB Molecule:putative nadh-flavin reductase; PDBTitle: crystal structure of the q03b84 protein from lactobacillus2 casei. northeast structural genomics consortium target3 lcr19.
79 | c2p5uC_ |
| not modelled | 11.0 | 8 | PDB header:isomerase Chain: C: PDB Molecule:udp-glucose 4-epimerase; PDBTitle: crystal structure of thermus thermophilus hb8 udp-glucose 4-2 epimerase complex with nad
80 | c2nwqA_ |
| not modelled | 11.0 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:probable short-chain dehydrogenase; PDBTitle: short chain dehydrogenase from pseudomonas aeruginosa
81 | d1rkxa_ |
| not modelled | 10.9 | 13 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
82 | c3ew7A_ |
| not modelled | 10.8 | 9 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lmo0794 protein; PDBTitle: crystal structure of the lmo0794 protein from listeria2 monocytogenes. northeast structural genomics consortium3 target lmr162.
83 | d1be9a_ |
| not modelled | 10.8 | 16 | Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain
84 | d1hi9a_ |
| not modelled | 10.6 | 13 | Fold:Dipeptide transport protein Superfamily:Dipeptide transport protein Family:Dipeptide transport protein
85 | c2jxoA_ |
| not modelled | 10.5 | 18 | PDB header:protein binding Chain: A: PDB Molecule:ezrin-radixin-moesin-binding phosphoprotein 50; PDBTitle: structure of the second pdz domain of nherf-1
86 | d2brfa1 |
| not modelled | 10.4 | 32 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain
87 | d1dg6a_ |
| not modelled | 10.3 | 25 | Fold:TNF-like Superfamily:TNF-like Family:TNF-like
88 | c1dg6A_ |
| not modelled | 10.3 | 25 | PDB header:apoptosis Chain: A: PDB Molecule:apo2l/tnf-related apopotis inducing ligand (trail); PDBTitle: crystal structure of apo2l/trail
89 | c3edmD_ |
| not modelled | 10.3 | 8 | PDB header:oxidoreductase Chain: D: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase from agrobacterium2 tumefaciens
90 | d2q8oa1 |
| not modelled | 10.3 | 20 | Fold:TNF-like Superfamily:TNF-like Family:TNF-like
91 | c3kt9A_ |
| not modelled | 10.3 | 23 | PDB header:hydrolase Chain: A: PDB Molecule:aprataxin; PDBTitle: aprataxin fha domain
92 | c2qq5A_ |
| not modelled | 10.2 | 5 | PDB header:oxidoreductase Chain: A: PDB Molecule:dehydrogenase/reductase sdr family member 1; PDBTitle: crystal structure of human sdr family member 1
93 | d1xu9a_ |
| not modelled | 10.1 | 6 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases
94 | d2q1ma1 |
| not modelled | 9.9 | 26 | Fold:TNF-like Superfamily:TNF-like Family:TNF-like
95 | d1lgpa_ |
| not modelled | 9.8 | 17 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain
96 | c2q30C_ |
| not modelled | 9.8 | 13 | PDB header:unknown function Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a rmlc-like cupin protein (dde_2303) from2 desulfovibrio desulfuricans subsp. at 1.94 a resolution
97 | c3iusB_ |
| not modelled | 9.6 | 16 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: the structure of a functionally unknown conserved protein2 from silicibacter pomeroyi dss
98 | c3oh8A_ |
| not modelled | 9.5 | 17 | PDB header:isomerase Chain: A: PDB Molecule:nucleoside-diphosphate sugar epimerase (sula family); PDBTitle: crystal structure of the nucleoside-diphosphate sugar epimerase from2 corynebacterium glutamicum. northeast structural genomics consortium3 target cgr91
99 | d1ujxa_ |
| not modelled | 9.5 | 41 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain