Phyre 2 alignment of P76007 with d2q1ma1

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Job Description | P76007
Confidence | 9.87% | Date | Thu Jan 5 12:17:17 GMT 2012
Rank | 94 | Aligned Residues | 34
% Identity | 26% | Template | d2q1ma1
SCOP info | TNF-like | TNF-like | TNF-like
Resolution | 2.30

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 457 | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | S | T | R | L | R | E | G | D | V | L | C | V | I | G | R | E | R | D | L | P | A | L | G | K | L | F | S | Q | S | P | P | V | A | L | D | Q | R | F | F | G | D | F | I | L | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | T | Y | E | L | H | V | G | D | T | I | D | L | I | F | N | S | E | H | Q | . | . | . | . | . | . | . | . | . | . | . | . | V | L | K | N | N | T | Y | W | G | I | I | L | L | A
Template Known Secondary structure |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S | S | T | T | S | . | . | . | . | . | . | . | . | . | . | . | . | B |  | T | T | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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