Phyre 2 alignment of P76007 with d2p13a1

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Job Description | P76007
Confidence | 97.73% | Date | Thu Jan 5 12:17:17 GMT 2012
Rank | 12 | Aligned Residues | 82
% Identity | 18% | Template | d2p13a1
SCOP info | FAD-binding/transporter-associated domain-like | FAD-binding/transporter-associated domain-like | CorC/HlyC domain-like
Resolution | 1.65

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 488 | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | V | A | L | D | Q | R | F | F | G | D | F | I | L | E | A | S | A | K | Y | A | D | V | A | L | I | Y | G | L | E | D | G | R | E | Y | R | D | K | Q | Q | T | L | G | E | I | V | Q | Q | L | L | G | A | A | P | V | V | G | D | Q | V | E | F | A | G | M | I | W | T | V | A | E | K | E | D | N | E | V | L | K | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | V | V | A | E | Q | Q | A | D | G | T | W | L | X | D | G | W | I | S | I | R | K | A | S | N | L | L | E | H | D | L | V | D | E | . | A | E | R | Y | S | T | L | G | G | Y | L | L | W | Q | F | G | Y | I | P | A | A | G | E | Q | I | T | V | D | G | L | I | F | E | I | V | S | V | N | K | H | N | I | G | K | V
Template Known Secondary structure |  |  |  | S |  |  |  |  | T | T | S |  |  |  |  |  | T | T | S | B |  |  |  |  |  |  |  |  | T | S |  |  |  |  | T | . | T |  |  |  |  | B |  |  |  |  |  |  |  |  |  | S | S |  |  |  | T | T |  |  |  |  |  | T | T |  |  |  |  |  |  |  | B |  | S | S | S | B |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 432 | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . |  | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510
|  | 568 | . | 570
Predicted Secondary structure |  |  |  |
Query SS confidence |  |  |  |
Query Sequence |  | G | V | R
Query Conservation |  |  |  |
Alig confidence |  |  |  |
Template Conservation |  |  |  |
Template Sequence |  | R | V | H
Template Known Secondary structure |  |  |  |
Template Predicted Secondary structure |  |  |  |
Template SS confidence |  |  |  |
|  | 511 | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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