 |
| Job Description | P24197 | | Confidence | 16.21% | Date | Thu Jan 5 11:41:08 GMT 2012 |
| Rank | 54 | Aligned Residues | 34 |
| % Identity | 9% | Template | d1uala_ |
| SCOP info | alpha/beta knot
| alpha/beta knot
| tRNA(m1G37)-methyltransferase TrmD
|
| Resolution | 1.80 |
|
|   |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
G | S | P | M | N | V | L | E | D | N | L | Y | T | R | S | W | Q | K | L | G | M | T | L | P | R | P | Q | A | I | V | V | V | S | A |
| Query Conservation |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |
|
|   |
|
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |
|
|
|
|   |   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
| Template Sequence |   |
G | G | P | G | M | L | M | M | V | Q | P | L | R | D | A | I | H | T | A | K | A | A | A | G | E | G | A | K | V | I | Y | L | S | P |
| Template Known Secondary structure |   |
|
| S |
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|