214 d1r88a_ Probab=99.25   E-value=4.5e-09  Score=64.88  Aligned_columns=221  Identities=17%

Q ss_pred             CEEEEECCCCCCCCEEEEECCCCC--CHHHHHHH---HHHHHC-CCEEEEEC--CCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             949981588989778999874799--88899999---998748-98899956--86899999886532207999864222
Q batch____         1 MKLSLSPPPYADAPVVVLISGLGG--SGSYWLPQ---LAVLEQ-EYQVVCYD--QRGTGNNPDTLAEDYSIAQMAAELHQ   72 (266)
Q Consensus         1 lhv~i~~~~~g~gp~ivllHG~~~--~~~~~~~~---~~~L~~-~~~via~D--~~G~G~S~~~~~~~~~~~~~~~~~~~   72 (266)
                      +++.|..|+.   |+|+|+||.++  +...|...   .+.+++ ++.|+.++  ..++.................+++..
T Consensus        18 ~~~~v~~p~~---p~l~lLHG~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~   94 (267)
T d1r88a_          18 IPVAFLAGGP---HAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQDGSKQWDTFLSAELPD   94 (267)
T ss_dssp             EEEEEECCSS---SEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSBCSSCTTCBHHHHHHTHHHH
T ss_pred             EEEEEEECCC---CEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             6899981899---7999988789998832123321089998328948972678877689874455544458899998999


Q ss_pred             HHHH---HHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
Q ss_conf             3321---0001233445540258999999862011373388547778770125678988864310000234444454311
Q batch____        73 ALVA---AGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLY  149 (266)
Q Consensus        73 ~~~~---~~~~~~~~~g~s~gg~~~~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (266)
                      .+..   ....+..+.|+|+||..++.++.++|+++..++..++....................................
T Consensus        95 ~~~~~~~~~~~~~~i~G~S~GG~~Al~la~~~Pd~f~~~~~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (267)
T d1r88a_          95 WLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAAGMQQFGGVDTNGMWGAPQLGR  174 (267)
T ss_dssp             HHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHHHHHHHHHHHHHHCCCTHHHHCCGGGST
T ss_pred             HHHHHCCCCCCCEEEEEECHHHHHHHHHHHHCHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHCCCCCCHHH
T ss_conf             88874599858589999787899999999978000230111143445557665200234443102232010037753688


Q ss_pred             CHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCCC----------------
Q ss_conf             0000002320234677777643211245665421011101344432104662588623887578----------------
Q batch____       150 PADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVP----------------  213 (266)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~D~~~~----------------  213 (266)
                                                      ............+.....++.+..+..|...+                
T Consensus       175 --------------------------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (267)
T d1r88a_         175 --------------------------------WKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSR  222 (267)
T ss_dssp             --------------------------------TGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHH
T ss_pred             --------------------------------HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             --------------------------------864103222444202682389731787665661000101355443238


Q ss_pred             HHHHHHHHHHCCCCEEEEECCCCC-CHHHHCHHHHHHHHHHHHHHH
Q ss_conf             999999999779979999889975-865727999999999999852
Q batch____       214 TACSSELHAALPDSQKMVMPYGGH-ACNVTDPETFNALLLNGLASL  258 (266)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~i~~~gH-~~~~e~p~~~~~~i~~fL~~~  258 (266)
                      ....+.....-.+.++.++++++| |...+  +.+.+.+-+.+..+
T Consensus       223 ~~~~~~~~~~g~~~~~~~~~~G~H~w~~W~--~~l~~~~~~l~~~l  266 (267)
T d1r88a_         223 MFYNQYRSVGGHNGHFDFPASGDNGWGSWA--PQLGAMSGDIVGAI  266 (267)
T ss_dssp             HHHHHHHHTTCCSEEEECCSSCCSSHHHHH--HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCEEEEEECCCCCCHHHHH--HHHHHHHHHHHHHH
T ss_conf             999999983899389999886775737889--99999999987560