BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (295 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P59439 Excinuclease cho n=116 Tax=Gammaproteobacteria R... 597 e-169 UniRef50_C1DM13 Excinuclease ABC protein, subunit C n=1 Tax=Azot... 270 3e-71 UniRef50_Q3BWL1 Excinuclease subunit n=5 Tax=Xanthomonas RepID=Q... 258 2e-67 UniRef50_B1XZE9 Excinuclease ABC C subunit domain protein n=1 Ta... 247 4e-64 UniRef50_Q2L1Q9 Excinuclease (Fragment) n=1 Tax=Bordetella avium... 203 7e-51 UniRef50_C7RVE9 Exonuclease RNase T and DNA polymerase III n=1 T... 201 2e-50 UniRef50_Q3SKJ9 DNA polymerase III, epsilon subunit n=4 Tax=Prot... 197 5e-49 UniRef50_C4K928 DNA polymerase III, epsilon subunit n=1 Tax=Thau... 197 5e-49 UniRef50_Q21VB4 DNA polymerase III, epsilon subunit n=7 Tax=Beta... 197 5e-49 UniRef50_Q1LGD6 DNA polymerase III, epsilon subunit n=5 Tax=cell... 190 4e-47 UniRef50_B3R8V7 DNA polymerase III, epsilon subunit + GIY-YIG en... 181 3e-44 UniRef50_A4SZE6 DNA polymerase III, epsilon subunit n=1 Tax=Poly... 179 8e-44 UniRef50_D0L0M1 DNA polymerase III, epsilon subunit n=1 Tax=Halo... 160 5e-38 UniRef50_A4AB96 Excinuclease ABC subunit C n=3 Tax=unclassified ... 158 2e-37 UniRef50_A3JBF5 Putative uncharacterized protein n=2 Tax=Marinob... 155 1e-36 UniRef50_C6NVW4 DNA polymerase III epsilon subunit n=1 Tax=Acidi... 149 1e-34 UniRef50_Q3BRX4 Putative excinuclease subunit n=1 Tax=Xanthomona... 146 8e-34 UniRef50_C0N1K0 Exonuclease family n=1 Tax=Methylophaga thiooxid... 144 4e-33 UniRef50_B9Z6P2 DNA polymerase III, epsilon subunit n=2 Tax=Chro... 141 2e-32 UniRef50_Q1YU82 DNA polymerase III, epsilon subunit n=1 Tax=gamm... 141 3e-32 UniRef50_Q5P3L6 Nuclease subunit Cho of the excinuclease complex... 139 1e-31 UniRef50_C7RR73 DNA polymerase III, epsilon subunit n=1 Tax=Cand... 127 5e-28 UniRef50_B7RUJ0 GIY-YIG catalytic domain protein n=1 Tax=marine ... 125 1e-27 UniRef50_C4K987 DNA polymerase III, epsilon subunit n=1 Tax=Thau... 108 2e-22 UniRef50_C1DBV5 Probable DNA-directed DNA polymerase III n=1 Tax... 105 2e-21 UniRef50_Q1CZB4 GIY-YIG catalytic domain protein n=1 Tax=Myxococ... 89 1e-16 UniRef50_C0GMH4 Excinuclease ABC, C subunit n=1 Tax=Desulfonatro... 87 5e-16 UniRef50_A4XIQ3 UvrABC system protein C n=2 Tax=Clostridia RepID... 86 1e-15 UniRef50_A0LZ46 Exonuclease family protein n=14 Tax=Bacteroidete... 86 2e-15 UniRef50_Q2FPC6 UvrABC system protein C n=16 Tax=Archaea RepID=U... 84 7e-15 UniRef50_Q26FQ2 DNA polymerase III, epsilon subunit n=1 Tax=Flav... 84 7e-15 UniRef50_Q72DX8 UvrABC system protein C n=3 Tax=Desulfovibrio vu... 83 1e-14 UniRef50_B5YHU3 Excinuclease ABC, C subunit n=1 Tax=Thermodesulf... 82 2e-14 UniRef50_A0M4R6 Protein containing exonuclease domain n=2 Tax=Fl... 82 3e-14 UniRef50_B8KSX2 Excinuclease cho n=1 Tax=gamma proteobacterium N... 82 3e-14 UniRef50_C9LR57 Excinuclease ABC subunit C n=1 Tax=Dialister inv... 81 4e-14 UniRef50_C0QPW8 Excinuclease ABC subunit C n=5 Tax=Aquificales R... 81 5e-14 UniRef50_B4U9X0 UvrABC system protein C n=3 Tax=Aquificaceae Rep... 80 8e-14 UniRef50_C1A8T0 UvrABC system protein C n=1 Tax=Gemmatimonas aur... 80 9e-14 UniRef50_A6EU25 DNA polymerase III, epsilon subunit n=2 Tax=Bact... 80 1e-13 UniRef50_A0LHP7 Excinuclease ABC, C subunit n=1 Tax=Syntrophobac... 80 1e-13 UniRef50_B3QSB2 DNA polymerase III, epsilon subunit n=1 Tax=Chlo... 80 1e-13 UniRef50_B7AWB5 Putative uncharacterized protein n=1 Tax=Bactero... 79 1e-13 UniRef50_C6X0K5 Excinuclease ABC subunit C n=9 Tax=Bacteroidetes... 79 2e-13 UniRef50_B9LUM9 UvrABC system protein C n=9 Tax=Halobacteriaceae... 79 2e-13 UniRef50_B5Y9S9 Excinuclease ABC, C subunit n=1 Tax=Coprothermob... 79 2e-13 UniRef50_B8DRE6 Excinuclease ABC, C subunit n=1 Tax=Desulfovibri... 79 3e-13 UniRef50_Q5F928 UvrABC system protein C n=29 Tax=Betaproteobacte... 78 3e-13 UniRef50_B7K124 Excinuclease ABC, C subunit n=5 Tax=Cyanobacteri... 78 3e-13 UniRef50_C7LYI3 Excinuclease ABC, C subunit n=1 Tax=Acidimicrobi... 77 7e-13 UniRef50_D1BLY6 Excinuclease ABC, C subunit n=5 Tax=Veillonellac... 77 7e-13 UniRef50_C6E9G2 UvrABC system protein C n=3 Tax=Geobacter RepID=... 77 8e-13 UniRef50_Q3ZYA3 UvrABC system protein C n=5 Tax=Dehalococcoides ... 77 9e-13 UniRef50_B0S0L4 UvrABC system protein C n=2 Tax=Finegoldia magna... 77 9e-13 UniRef50_Q2S280 UvrABC system protein C n=1 Tax=Salinibacter rub... 76 1e-12 UniRef50_A3DJ07 UvrABC system protein C n=15 Tax=Bacteria RepID=... 76 1e-12 UniRef50_Q180Q8 UvrABC system protein C n=8 Tax=Clostridiales Re... 76 2e-12 UniRef50_A9NEZ8 Excinuclease ABC, subunit C n=1 Tax=Acholeplasma... 76 2e-12 UniRef50_D2RRA5 Excinuclease ABC, C subunit n=2 Tax=Halobacteria... 76 2e-12 UniRef50_D0MI24 DNA polymerase III, epsilon subunit n=1 Tax=Rhod... 75 2e-12 UniRef50_Q255T2 UvrABC system protein C n=17 Tax=Chlamydiaceae R... 75 2e-12 UniRef50_C1SGC9 Excinuclease ABC, C subunit n=1 Tax=Denitrovibri... 75 2e-12 UniRef50_Q2S2L6 Exonuclease family n=2 Tax=Salinibacter ruber DS... 75 3e-12 UniRef50_Q7NKN5 Excinuclease ABC subunit C n=1 Tax=Gloeobacter v... 75 3e-12 UniRef50_Q0B0A0 UvrABC system protein C n=1 Tax=Syntrophomonas w... 74 4e-12 UniRef50_Q1IZB2 UvrABC system protein C n=4 Tax=Deinococcus RepI... 74 4e-12 UniRef50_Q3M542 UvrABC system protein C n=11 Tax=Cyanobacteria R... 74 4e-12 UniRef50_A9BGW2 UvrABC system protein C n=1 Tax=Petrotoga mobili... 74 6e-12 UniRef50_A9B4F8 Excinuclease ABC, C subunit n=1 Tax=Herpetosipho... 74 6e-12 UniRef50_A0L8U4 Excinuclease ABC subunit C n=1 Tax=Magnetococcus... 74 6e-12 UniRef50_D1Y7G8 Excinuclease ABC, C subunit n=1 Tax=Pyramidobact... 74 8e-12 UniRef50_A0AGX5 Complete genome n=3 Tax=Listeria RepID=A0AGX5_LISW6 74 8e-12 UniRef50_D1R706 Putative uncharacterized protein n=1 Tax=Parachl... 74 8e-12 UniRef50_B8FTB6 Excinuclease ABC C subunit domain protein n=2 Ta... 74 9e-12 UniRef50_A1BED8 UvrABC system protein C n=12 Tax=cellular organi... 73 9e-12 UniRef50_C7H041 Excinuclease ABC subunit C n=1 Tax=Eubacterium s... 73 1e-11 UniRef50_C9R9D0 Excinuclease ABC, C subunit n=1 Tax=Ammonifex de... 73 1e-11 UniRef50_A9KSS0 UvrABC system protein C n=59 Tax=Firmicutes RepI... 73 1e-11 UniRef50_A8SNK4 Putative uncharacterized protein n=1 Tax=Parvimo... 73 1e-11 UniRef50_A7VUD6 Putative uncharacterized protein n=4 Tax=Clostri... 72 2e-11 UniRef50_A8GXA7 Excinuclease ABC subunit C n=2 Tax=Rickettsia be... 72 2e-11 UniRef50_O26541 UvrABC system protein C n=1 Tax=Methanothermobac... 72 2e-11 UniRef50_C9M9X8 Excinuclease ABC, C subunit n=1 Tax=Jonquetella ... 72 2e-11 UniRef50_Q7V7L7 UvrABC system protein C n=43 Tax=Cyanobacteria R... 72 2e-11 UniRef50_Q313T1 UvrABC system protein C n=2 Tax=Desulfovibrio de... 72 3e-11 UniRef50_Q1MQH2 UvrABC system protein C n=3 Tax=Desulfovibrionac... 72 3e-11 UniRef50_A6BHR5 Putative uncharacterized protein n=1 Tax=Dorea l... 72 3e-11 UniRef50_B5YF86 UvrABC system protein C n=2 Tax=Dictyoglomus Rep... 72 3e-11 UniRef50_Q83NI9 UvrABC system protein C n=2 Tax=Tropheryma whipp... 72 3e-11 UniRef50_Q12W02 UvrABC system protein C n=1 Tax=Methanococcoides... 71 4e-11 UniRef50_B2RM62 UvrABC system protein C n=4 Tax=Bacteroidetes Re... 71 4e-11 UniRef50_UPI0001C41B0D excinuclease ABC C subunit UvrC n=1 Tax=M... 71 4e-11 UniRef50_C4LI21 Putative uncharacterized protein n=1 Tax=Coryneb... 71 4e-11 UniRef50_D1VLC1 DNA polymerase III, epsilon subunit n=1 Tax=Fran... 71 4e-11 UniRef50_Q1AUH1 UvrABC system protein C n=1 Tax=Rubrobacter xyla... 71 4e-11 UniRef50_A5WBX3 UvrABC system protein C n=3 Tax=Psychrobacter Re... 71 5e-11 UniRef50_B8DGB7 UvrABC system protein C (Protein UvrC) (Excinucl... 71 5e-11 UniRef50_Q5X1P5 UvrABC system protein C n=7 Tax=Gammaproteobacte... 71 5e-11 UniRef50_B5EPN1 Excinuclease ABC, C subunit n=2 Tax=Acidithiobac... 71 5e-11 UniRef50_B8CYK1 Excinuclease ABC, C subunit n=1 Tax=Halothermoth... 71 5e-11 UniRef50_A0M672 UvrABC system protein C n=7 Tax=Bacteroidetes Re... 71 6e-11 UniRef50_A9DMS8 DNA polymerase III, epsilon subunit n=1 Tax=Kord... 70 6e-11 UniRef50_B3E0M3 Excinuclease ABC subunit C n=1 Tax=Methylacidiph... 70 6e-11 UniRef50_C9RQJ8 Excinuclease ABC, C subunit n=1 Tax=Fibrobacter ... 70 7e-11 UniRef50_Q2NGT2 UvrABC system protein C n=4 Tax=Methanobacteriac... 70 7e-11 UniRef50_A4BWD8 DNA polymerase III, epsilon subunit n=3 Tax=Flav... 70 8e-11 UniRef50_C7MCN8 Excinuclease ABC subunit C n=1 Tax=Brachybacteri... 70 8e-11 UniRef50_A9WT69 UvrABC system protein C n=2 Tax=Actinobacteria (... 70 9e-11 UniRef50_C5RNQ3 Excinuclease ABC C subunit domain protein n=1 Ta... 70 9e-11 UniRef50_A6M201 Excinuclease ABC, C subunit domain protein n=5 T... 70 1e-10 UniRef50_Q3AFE5 UvrABC system protein C n=1 Tax=Carboxydothermus... 69 2e-10 UniRef50_Q5LIY7 UvrABC system protein C n=26 Tax=Bacteroidetes R... 69 2e-10 UniRef50_B1CBT5 Putative uncharacterized protein n=1 Tax=Anaerof... 69 2e-10 UniRef50_Q1Q607 Similar to uvrABC system protein C (UvrC exinucl... 69 2e-10 UniRef50_D1CFI6 Excinuclease ABC, C subunit n=1 Tax=Thermobaculu... 69 2e-10 UniRef50_C6NXT8 Excinuclease ABC subunit C n=2 Tax=Gammaproteoba... 69 3e-10 UniRef50_C6MYN0 Excinuclease ABC subunit n=1 Tax=Legionella dran... 68 3e-10 UniRef50_C7LTD0 Excinuclease ABC, C subunit n=2 Tax=Desulfovibri... 68 3e-10 UniRef50_C6XFB9 Excinuclease ABC subunit C n=1 Tax=Candidatus Li... 68 3e-10 UniRef50_Q5GSR4 UvrABC system protein C n=10 Tax=Wolbachia RepID... 68 3e-10 UniRef50_B3QRR8 Excinuclease ABC, C subunit n=3 Tax=Bacteria Rep... 68 3e-10 UniRef50_D2RIL8 Excinuclease ABC, C subunit n=3 Tax=Veillonellac... 68 4e-10 UniRef50_UPI0001C3237F excinuclease ABC, C subunit n=1 Tax=Conex... 68 4e-10 UniRef50_C8WI08 Excinuclease ABC, C subunit n=3 Tax=Coriobacteri... 68 4e-10 UniRef50_Q6MDC8 UvrABC system protein C n=1 Tax=Candidatus Proto... 68 4e-10 UniRef50_A4X9Y0 DNA polymerase III, epsilon subunit n=6 Tax=Acti... 68 4e-10 UniRef50_B0SB16 UvrABC system protein C n=6 Tax=Leptospira RepID... 68 5e-10 UniRef50_B2A711 Excinuclease ABC, C subunit n=2 Tax=Firmicutes R... 67 5e-10 UniRef50_D2R0D2 Excinuclease ABC C subunit domain protein n=1 Ta... 67 5e-10 UniRef50_D0LVJ3 Excinuclease ABC, C subunit n=1 Tax=Haliangium o... 67 5e-10 UniRef50_A6SXR9 UvrABC system protein C n=19 Tax=Betaproteobacte... 67 5e-10 UniRef50_C1PCU9 Excinuclease ABC C subunit domain protein n=1 Ta... 67 6e-10 UniRef50_C2MAD2 Excinuclease ABC subunit C n=1 Tax=Porphyromonas... 67 6e-10 UniRef50_Q03F33 UvrABC system protein C n=7 Tax=Firmicutes RepID... 67 6e-10 UniRef50_Q21AW5 UvrABC system protein C n=89 Tax=Alphaproteobact... 67 6e-10 UniRef50_A8GP33 UvrABC system protein C n=14 Tax=Rickettsia RepI... 67 7e-10 UniRef50_UPI00016BFB47 excinuclease ABC, C subunit n=1 Tax=Epulo... 67 1e-09 UniRef50_Q0F271 Excinuclease ABC subunit C n=1 Tax=Mariprofundus... 67 1e-09 UniRef50_C4FUE0 Putative uncharacterized protein n=1 Tax=Catonel... 66 1e-09 UniRef50_Q7VK73 UvrABC system protein C n=2 Tax=Helicobacter Rep... 66 1e-09 UniRef50_A5EW70 UvrABC system protein C n=1 Tax=Dichelobacter no... 66 1e-09 UniRef50_D1B5F2 Excinuclease ABC, C subunit n=2 Tax=Synergistace... 66 1e-09 UniRef50_C1AB71 Putative exonuclease n=1 Tax=Gemmatimonas aurant... 66 1e-09 UniRef50_B9XGZ6 Excinuclease ABC C subunit domain protein n=2 Ta... 66 1e-09 UniRef50_Q2LR71 UvrABC system protein C n=1 Tax=Syntrophus acidi... 66 1e-09 UniRef50_Q1D921 UvrABC system protein C n=2 Tax=Cystobacterineae... 66 1e-09 UniRef50_Q11YP9 UvrABC system protein C n=3 Tax=Bacteroidetes Re... 66 1e-09 UniRef50_C7N5B1 Excinuclease ABC, C subunit n=6 Tax=Coriobacteri... 66 1e-09 UniRef50_C1F4W9 UvrABC system protein C n=1 Tax=Acidobacterium c... 66 2e-09 UniRef50_C9KP10 Excinuclease ABC subunit C n=1 Tax=Mitsuokella m... 66 2e-09 UniRef50_Q31GI3 UvrABC system protein C n=2 Tax=Bacteria RepID=U... 66 2e-09 UniRef50_B6INU7 Excinuclease ABC, C subunit, putative n=18 Tax=c... 66 2e-09 UniRef50_D1BFZ9 Exonuclease, DNA polymerase III, epsilon subunit... 65 2e-09 UniRef50_C2KQB5 Excinuclease ABC subunit C n=2 Tax=Mobiluncus mu... 65 2e-09 UniRef50_UPI000050F72E excinuclease ABC subunit C n=1 Tax=Brevib... 65 2e-09 UniRef50_A7HD93 UvrABC system protein C n=5 Tax=Bacteria RepID=U... 65 2e-09 UniRef50_C5CDH0 Excinuclease ABC, C subunit n=1 Tax=Kosmotoga ol... 65 2e-09 UniRef50_Q2NJ78 UvrABC system protein C n=3 Tax=Candidatus Phyto... 65 2e-09 UniRef50_Q601Y1 Excinuclease ABC subunit C n=4 Tax=Mycoplasma hy... 65 3e-09 UniRef50_A4FBL9 UvrABC system protein C n=26 Tax=Actinomycetales... 65 3e-09 UniRef50_C6J7F4 UvrABC system protein C n=1 Tax=Paenibacillus sp... 65 3e-09 UniRef50_Q0BPX7 UvrABC system protein C n=43 Tax=Alphaproteobact... 65 3e-09 UniRef50_Q26GF0 Excinuclease ABC, C subunit n=5 Tax=cellular org... 65 3e-09 UniRef50_Q6MKS2 UvrABC system protein C n=1 Tax=Bdellovibrio bac... 65 3e-09 UniRef50_D2ML33 Excinuclease ABC, C subunit n=1 Tax=Candidatus P... 65 3e-09 UniRef50_Q0RH00 DNA excision repair enzyme UvrABC; UvrC subunit ... 65 3e-09 UniRef50_D1BHL1 Excinuclease ABC subunit C n=16 Tax=Actinomyceta... 65 3e-09 UniRef50_D0WQL3 Putative DNA polymerase III, epsilon subunit n=1... 65 3e-09 UniRef50_Q7UPD6 Excinuclease ABC subunit C n=5 Tax=Planctomyceta... 65 3e-09 UniRef50_C7RHW1 Excinuclease ABC, C subunit n=4 Tax=Clostridiale... 65 4e-09 UniRef50_Q2JCI3 UvrABC system protein C n=12 Tax=Actinomycetales... 65 4e-09 UniRef50_UPI0001788B47 Excinuclease ABC C subunit domain protein... 64 4e-09 UniRef50_A7GIE5 GIY-YIG domain protein n=10 Tax=Clostridium RepI... 64 4e-09 UniRef50_A5FM03 UvrABC system protein C n=25 Tax=Bacteroidetes R... 64 4e-09 UniRef50_B3WE47 UvrABC system protein C n=33 Tax=Bacilli RepID=U... 64 4e-09 UniRef50_B6AR33 Excinuclease ABC, C subunit (UvrC) n=3 Tax=Lepto... 64 5e-09 UniRef50_D1RJY2 Excinuclease ABC subunit C n=1 Tax=Legionella lo... 64 5e-09 UniRef50_D2L1M6 Excinuclease ABC, C subunit n=1 Tax=Desulfovibri... 64 5e-09 UniRef50_Q4JVI8 UvrABC system protein C n=8 Tax=Corynebacterium ... 64 5e-09 UniRef50_C2CW30 Excinuclease ABC subunit C n=1 Tax=Gardnerella v... 64 5e-09 UniRef50_A5FIG6 DNA polymerase III, epsilon subunit n=1 Tax=Flav... 64 5e-09 UniRef50_C0QWI5 Excinuclease ABC, C subunit n=2 Tax=Brachyspira ... 64 6e-09 UniRef50_B3DRV5 UvrABC system protein C n=18 Tax=Bifidobacterium... 64 6e-09 UniRef50_Q1LKN9 UvrABC system protein C n=32 Tax=Proteobacteria ... 64 6e-09 UniRef50_B4RF25 UvrC, excinuclease ABC, C subunit n=1 Tax=Phenyl... 64 7e-09 UniRef50_C3JAE7 Excinuclease ABC subunit C n=2 Tax=Bacteria RepI... 64 7e-09 UniRef50_B6IZT9 UvrABC system protein C n=6 Tax=Coxiella burneti... 64 7e-09 UniRef50_A1ZTX2 Excinuclease ABC, C subunit n=4 Tax=Bacteroidete... 64 8e-09 UniRef50_Q4FPI1 UvrABC system protein C n=3 Tax=Candidatus Pelag... 64 9e-09 UniRef50_D1VGT9 Excinuclease ABC, C subunit n=1 Tax=Frankia sp. ... 63 1e-08 UniRef50_B9M422 UvrABC system protein C n=8 Tax=Desulfuromonadal... 63 1e-08 UniRef50_B5E2L2 UvrABC system protein C n=268 Tax=Bacilli RepID=... 63 1e-08 UniRef50_C7HUD8 UvrABC system, C protein n=2 Tax=Anaerococcus Re... 63 1e-08 UniRef50_Q2RS75 UvrABC system protein C n=13 Tax=Alphaproteobact... 63 1e-08 UniRef50_Q0A8X6 UvrABC system protein C n=19 Tax=Gammaproteobact... 63 1e-08 UniRef50_A5M6P1 Excinuclease ABC subunit C n=1 Tax=Streptococcus... 63 1e-08 UniRef50_C0X5Y6 Excision endonuclease subunit UvrC n=22 Tax=Ente... 63 1e-08 UniRef50_D0WMS6 Excinuclease ABC subunit C n=1 Tax=Actinomyces s... 63 1e-08 UniRef50_C0ZZE8 UvrABC system protein C n=14 Tax=Actinomycetales... 63 1e-08 UniRef50_Q14NX3 Putative uvrc protein excinuclease abc subunit c... 63 1e-08 UniRef50_P47448 UvrABC system protein C n=2 Tax=Mycoplasma RepID... 63 1e-08 UniRef50_A3NXK5 UvrABC system protein C n=59 Tax=Proteobacteria ... 63 1e-08 UniRef50_D2LI59 Excinuclease ABC, C subunit n=1 Tax=Rhodomicrobi... 63 1e-08 UniRef50_C5BV40 UvrABC system protein C n=16 Tax=Actinomycetales... 62 2e-08 UniRef50_C0QET6 UvrABC system protein C n=2 Tax=Desulfobacterace... 62 2e-08 UniRef50_UPI0001977D11 excinuclease ABC subunit C n=1 Tax=Helico... 62 2e-08 UniRef50_B0K791 UvrABC system protein C n=11 Tax=Thermoanaerobac... 62 2e-08 UniRef50_Q04EZ7 UvrABC system protein C n=42 Tax=Lactobacillales... 62 2e-08 UniRef50_D0RRP8 Excinuclease ABC subunit C n=1 Tax=alpha proteob... 62 2e-08 UniRef50_C3XLG8 Excinuclease abc subunit c n=1 Tax=Helicobacter ... 62 2e-08 UniRef50_D1PLG8 Excinuclease ABC subunit C n=3 Tax=Ruminococcace... 62 2e-08 UniRef50_A1SLE5 DNA polymerase III, epsilon subunit n=5 Tax=Acti... 62 2e-08 UniRef50_B3EU62 Excinuclease ABC, C subunit n=2 Tax=Candidatus A... 62 2e-08 UniRef50_Q6SI31 Excinuclease ABC, C subunit n=1 Tax=uncultured m... 62 3e-08 UniRef50_C4XSA3 UvrABC system protein C n=1 Tax=Desulfovibrio ma... 62 3e-08 UniRef50_B2JFL2 Excinuclease ABC, C subunit n=2 Tax=Burkholderia... 62 3e-08 UniRef50_C7PV18 DNA polymerase III, epsilon subunit n=3 Tax=Sphi... 62 3e-08 UniRef50_A0Q5Q7 UvrABC system protein C n=18 Tax=Francisella Rep... 62 3e-08 UniRef50_A8MLA3 Excinuclease ABC C subunit domain protein n=1 Ta... 62 3e-08 UniRef50_C2FTR2 DNA polymerase III, epsilon subunit n=2 Tax=Sphi... 62 3e-08 UniRef50_Q3IYX6 UvrABC system protein C n=23 Tax=Alphaproteobact... 62 3e-08 UniRef50_Q47EE8 UvrABC system protein C n=6 Tax=Proteobacteria R... 62 3e-08 UniRef50_Q2G9G8 UvrABC system protein C n=2 Tax=Sphingomonadales... 61 4e-08 UniRef50_B8I8F2 UvrABC system protein C n=2 Tax=Clostridium RepI... 61 4e-08 UniRef50_Q7NBC4 UvrABC system protein C n=1 Tax=Mycoplasma galli... 61 4e-08 UniRef50_A0QWV6 UvrABC system protein C n=27 Tax=Actinomycetales... 61 5e-08 UniRef50_C3XEM6 Excinuclease ABC subunit C n=1 Tax=Helicobacter ... 61 5e-08 UniRef50_UPI0000510268 hypothetical protein BlinB_15797 n=1 Tax=... 61 5e-08 UniRef50_B0VLX1 UvrABC system protein C n=17 Tax=Moraxellaceae R... 61 5e-08 UniRef50_C9AVR8 Excinuclease ABC n=3 Tax=Enterococcus casselifla... 61 5e-08 UniRef50_C2M5F0 DNA polymerase III, epsilon subunit n=1 Tax=Capn... 61 6e-08 UniRef50_A8ZVJ2 Excinuclease ABC, C subunit n=1 Tax=Desulfococcu... 61 6e-08 UniRef50_A9EYQ9 Excinuclease ABC, subunit C n=1 Tax=Sorangium ce... 61 6e-08 UniRef50_C1B4L2 UvrABC system protein C n=10 Tax=Actinomycetales... 60 7e-08 UniRef50_B9KXM0 DNA polymerase III, epsilon subunit n=2 Tax=Ther... 60 7e-08 UniRef50_B7J223 UvrABC system protein C n=22 Tax=Borrelia RepID=... 60 7e-08 UniRef50_C5NYN4 Excinuclease ABC subunit C n=1 Tax=Gemella haemo... 60 7e-08 UniRef50_B0VH58 Excinuclease ABC, C subunit n=1 Tax=Candidatus C... 60 8e-08 UniRef50_B2I637 UvrABC system protein C n=15 Tax=Xanthomonadacea... 60 9e-08 UniRef50_Q820N6 UvrABC system protein C n=2 Tax=Proteobacteria R... 60 1e-07 UniRef50_D1AXF7 Excinuclease ABC, C subunit n=1 Tax=Streptobacil... 60 1e-07 UniRef50_A8ESX8 UvrABC system protein C n=26 Tax=Epsilonproteoba... 60 1e-07 UniRef50_A9AEP6 DNA polymerase III, epsilon subunit n=55 Tax=Bur... 59 1e-07 UniRef50_B0AA93 Putative uncharacterized protein n=1 Tax=Clostri... 59 1e-07 UniRef50_Q2GJJ1 UvrABC system protein C n=6 Tax=Anaplasma RepID=... 59 1e-07 UniRef50_D2RB48 Excinuclease ABC, C subunit n=1 Tax=Gardnerella ... 59 2e-07 UniRef50_C5ADA8 UvrABC system protein C (Protein uvrC) n=4 Tax=P... 59 2e-07 UniRef50_B8FHR2 UvrABC system protein C n=1 Tax=Desulfatibacillu... 59 3e-07 UniRef50_Q6AKB8 UvrABC system protein C n=3 Tax=Deltaproteobacte... 58 3e-07 UniRef50_A9A4M1 Excinuclease ABC, C subunit n=2 Tax=Thaumarchaeo... 58 4e-07 >UniRef50_P59439 Excinuclease cho n=116 Tax=Gammaproteobacteria RepID=CHO_ECOL6 Length = 295 Score = 597 bits (1538), Expect = e-169, Method: Compositional matrix adjust. Identities = 287/295 (97%), Positives = 293/295 (99%) Query: 1 MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSR 60 MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKS+NIRSR Sbjct: 1 MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSINIRSR 60 Query: 61 VLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ 120 VLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ Sbjct: 61 VLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ 120 Query: 121 LNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA 180 LNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA Sbjct: 121 LNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA 180 Query: 181 CFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQ 240 CFRSALKRCAGACCGKESH++HALRLRQSLERLRVVCWPW+GAVALKEQHPEMTQYHIIQ Sbjct: 181 CFRSALKRCAGACCGKESHDDHALRLRQSLERLRVVCWPWKGAVALKEQHPEMTQYHIIQ 240 Query: 241 NWLWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRAS 295 NWLWLGAVNSL+EATTLIR PAGFDHDGYKILCKPLLSGNYEITELDP NDQ+AS Sbjct: 241 NWLWLGAVNSLKEATTLIRAPAGFDHDGYKILCKPLLSGNYEITELDPVNDQQAS 295 >UniRef50_C1DM13 Excinuclease ABC protein, subunit C n=1 Tax=Azotobacter vinelandii DJ RepID=C1DM13_AZOVD Length = 282 Score = 270 bits (691), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 147/276 (53%), Positives = 192/276 (69%), Gaps = 9/276 (3%) Query: 15 AAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAML 74 A +YEYPEHLR + +P PGVYLF+G+SD++PLYIGKSV+IR+R+L+HLRTP+EA +L Sbjct: 11 AELYEYPEHLRERIASMPKAPGVYLFYGDSDSLPLYIGKSVDIRARLLAHLRTPEEARLL 70 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEV 134 RQ+RRI I TAGEIGALLLE+RLIKE QPL+NKRLR R+L +++L + R +VV A Sbjct: 71 RQTRRIEHIRTAGEIGALLLESRLIKELQPLYNKRLRCQRRLYSIRLADGRPEVVEAVPP 130 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 D +A L+GLF +RR A + L +AD +LC GLLGLE GRACFR+ + RCAGAC Sbjct: 131 DREQA--LYGLFRSRRVAGERLLEMADRHRLCLGLLGLERHEPGRACFRTQIGRCAGACA 188 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 G+ESHE HA RL +L ++ CWP+ G VAL E + YH++ W +LG SL+ A Sbjct: 189 GRESHEAHAARLLAALTEWQLFCWPYPGPVALHEHGEGLRDYHVVDRWHFLGTYASLKAA 248 Query: 255 TTLIRTPAG----FDHDGYKILCKPLLSGNYEITEL 286 + PAG FD D Y+IL +P+L G + L Sbjct: 249 R---KAPAGPLPRFDADSYQILLRPILQGGAGVVPL 281 >UniRef50_Q3BWL1 Excinuclease subunit n=5 Tax=Xanthomonas RepID=Q3BWL1_XANC5 Length = 287 Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 125/271 (46%), Positives = 181/271 (66%) Query: 18 YEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQS 77 Y YPEHLR + LP GVY FHG+ +PLYIGKSVN+R+RV+ H RT +EA++LRQ+ Sbjct: 17 YAYPEHLRDCVEALPKTAGVYTFHGKEGLLPLYIGKSVNVRTRVMDHCRTLEEASLLRQT 76 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 +S I AG+ GA LLEA+++K Q PL+NK LR+ + +++L V +V++ E D + Sbjct: 77 TSVSCIPMAGDTGARLLEAQMVKRQMPLYNKLLRKVPRQFSIRLYRGEVSIVHSAEYDVA 136 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 +P L+GL+++ ++A ++L+ IAD+ +LCY L+GLE L GR CFR+ LKRCAGAC G E Sbjct: 137 SSPMLYGLYSSPQSAQKSLRRIADDHRLCYALVGLERLPSGRPCFRAMLKRCAGACSGGE 196 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + ++H RLR +L RL + WP+ G +AL+E+ + Q H++ W +LG V +L A L Sbjct: 197 TLDDHEERLRAALIRLELSTWPFHGRIALEEKGENLRQLHVLDAWHYLGTVTTLTAARKL 256 Query: 258 IRTPAGFDHDGYKILCKPLLSGNYEITELDP 288 P GFD D Y+I+ + SG IT L P Sbjct: 257 KGEPLGFDRDSYRIIRAAIESGLDAITVLGP 287 >UniRef50_B1XZE9 Excinuclease ABC C subunit domain protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XZE9_LEPCP Length = 275 Score = 247 bits (630), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 138/269 (51%), Positives = 171/269 (63%), Gaps = 11/269 (4%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRISWICTAG 87 L LP+ PGVYLFHGES +PLYIGKSVNIRSRVLSHLR P EA ML Q+RR++WI TAG Sbjct: 8 LRALPSAPGVYLFHGES-ALPLYIGKSVNIRSRVLSHLREPGEARMLLQTRRVTWIRTAG 66 Query: 88 EIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDV----VYAKEVDFSRAPNLF 143 EIGALLLE+RLIK QQPL+NK+LRR+R+LC+ + + V VY+++VDF+ LF Sbjct: 67 EIGALLLESRLIKAQQPLYNKQLRRSRELCSWRFCGSQPAVAPALVYSRDVDFAVTDGLF 126 Query: 144 GLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHA 203 GLF + AA L A +LC LGLEP +R R CF L RC G C G+ES HA Sbjct: 127 GLFRSAHAAKDFLIDTAQAHRLCLVALGLEPATR-RGCFGLQLGRCDGVCVGRESAASHA 185 Query: 204 LRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNW-----LWLGAVNSLEEATTLI 258 LR+ Q+L + V WP+ GAV L E+ + Q H+++NW L +G Sbjct: 186 LRVAQALAQCAVQRWPFPGAVGLVERDGDWVQTHVVRNWRHERTLDVGGAQDARPPLADP 245 Query: 259 RTPAGFDHDGYKILCKPLLSGNYEITELD 287 AGFD D Y+IL KPLL G E L+ Sbjct: 246 GAGAGFDLDAYRILVKPLLDGGCERIHLE 274 >UniRef50_Q2L1Q9 Excinuclease (Fragment) n=1 Tax=Bordetella avium 197N RepID=Q2L1Q9_BORA1 Length = 301 Score = 203 bits (516), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 117/276 (42%), Positives = 170/276 (61%), Gaps = 20/276 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRIS 81 + +R+ LP GVYL+ GE+ T+PLYIGKSV++R R LSHLRTP EAAM+RQ RR+ Sbjct: 11 QTVRALARTLPRSTGVYLYFGEA-TLPLYIGKSVDMRGRFLSHLRTPAEAAMMRQVRRVD 69 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-------EKRVDVVYAKEV 134 I TAGE+GALLLEA LIK++ PLFN+RLRR R+L L+L + R++ + + Sbjct: 70 CIETAGELGALLLEASLIKQRMPLFNQRLRRTRRLHVLRLASLACGGLQPRIEGLTGTPL 129 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 + A FGLF +R AA++ L+++A +LC GLLG+E + R CF L RC G C Sbjct: 130 ECEAAR--FGLFKSRSAAVEHLRSLAQAHELCLGLLGIERMG-SRGCFGLQLGRCRGVCV 186 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 G+E + H RL+++L+ LRV WP+ G + + E+ + Q H + +W +L S + Sbjct: 187 GREPRQTHDQRLQEALDALRVHAWPYAGPIRIVERAGDWVQSHEVHDWRYLHTDCSRQG- 245 Query: 255 TTLIRTPAG----FDHDGYKILCKPLLSGNYEITEL 286 R AG FD D Y++L +P+L +I ++ Sbjct: 246 ----RIGAGIQQSFDADIYRLLVRPILEQQADIVQV 277 >UniRef50_C7RVE9 Exonuclease RNase T and DNA polymerase III n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVE9_9PROT Length = 469 Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 116/279 (41%), Positives = 166/279 (59%), Gaps = 17/279 (6%) Query: 21 PEHLRS-FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSH----LRTPDEAAMLR 75 P HL S L+DLP PGVYLF+G++D + LY+GKSVN+R RV +H LR E + + Sbjct: 186 PPHLDSALLDDLPESPGVYLFYGDNDAL-LYVGKSVNLRQRVRAHFASDLREYKEMRLSQ 244 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-----NEKRVDVVY 130 + RR+ W T GE+GALLLE+RLIKE QP+ N RLRR+ LC QL + R+ +V Sbjct: 245 EVRRLRWQETVGELGALLLESRLIKECQPIHNHRLRRSSDLCTWQLVQVAPGDCRLRLVS 304 Query: 131 AKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLE-PLSRGRACFRSALKRC 189 + DF R+ +LFGLFANRR A +L+ +A LC +LGLE P GR CF +K C Sbjct: 305 GQTADFVRSNDLFGLFANRREATDSLRKVAAANGLCPIILGLEKPAGPGRPCFSHQVKHC 364 Query: 190 AGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHP--EMTQYHIIQNWLWLGA 247 GAC GKE+ H+ R+ +L +L++ WP+ GA+ + E+ + + H++ W LG+ Sbjct: 365 RGACVGKEAIGVHSDRMLSALMKLKLTAWPYPGAIGVVERDDLRRVEEVHVVNGWRHLGS 424 Query: 248 VNSLEEATTLIRTPAG---FDHDGYKILCKPLLSGNYEI 283 S ++ +G FD D Y++L L G ++ Sbjct: 425 ARSEVGVQEILLGQSGQGRFDRDTYRLLAAHLGKGRVQV 463 >UniRef50_Q3SKJ9 DNA polymerase III, epsilon subunit n=4 Tax=Proteobacteria RepID=Q3SKJ9_THIDA Length = 470 Score = 197 bits (500), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 118/281 (41%), Positives = 164/281 (58%), Gaps = 16/281 (5%) Query: 21 PEHLR-SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLR 75 P HL + L DLP PGVYLF+GE+D + LY+GKSVN+R RV SH R + + Sbjct: 191 PPHLDPALLEDLPESPGVYLFYGENDVL-LYVGKSVNLRQRVFSHFAADTREYKAMQLTQ 249 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK-----RVDVVY 130 Q RR+ W T GE+GALLLE+RLIKE P N+RLRR +LCA +L+E R +V Sbjct: 250 QVRRVEWRETVGELGALLLESRLIKEGAPAHNRRLRRASELCAWRLDEVAPGDFRPVLVT 309 Query: 131 AKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA-CFRSALKRC 189 A + DF R +LFG F++RR A AL+ IAD +LC +LGLE +R + CF +++C Sbjct: 310 ADDPDFGRDGDLFGPFSSRRQATLALRKIADAHQLCPVVLGLEKPARPDSPCFAFQVQKC 369 Query: 190 AGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHP--EMTQYHIIQNWLWLGA 247 GAC GKE+ H+ RL +L + ++ W + GA+ L E+ ++ + H++ W +LG Sbjct: 370 RGACAGKETAGLHSARLMAALAKTKMKSWAYPGAIGLVERDDFLDVEEVHVVHAWRYLGT 429 Query: 248 VNSLEEATTLIRTP--AGFDHDGYKILCKPLLSGNYEITEL 286 S E L+ A FD D YK+L L + I L Sbjct: 430 AKSEAEIGELLEHAARAPFDLDTYKLLKTQLAKSKFTIRAL 470 >UniRef50_C4K928 DNA polymerase III, epsilon subunit n=1 Tax=Thauera sp. MZ1T RepID=C4K928_THASP Length = 502 Score = 197 bits (500), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 124/306 (40%), Positives = 158/306 (51%), Gaps = 57/306 (18%) Query: 21 PEHLR-SFLNDLPTRPGVYLFHGES----------------------------------- 44 P HL + DLP PGVYLF+GE Sbjct: 192 PPHLDPEQIADLPDTPGVYLFYGERGGESSQLGGNDEADAEAEADPLGPGRARTGARDRK 251 Query: 45 -----DTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQSRRISWICTAGEIGALLLE 95 +PLYIGKS +RSRVLSH + E ++ +Q RRI WI TAGEIGALL E Sbjct: 252 RHAPLQDLPLYIGKSTRLRSRVLSHFAADHSSDRELSLSQQVRRIEWIATAGEIGALLKE 311 Query: 96 ARLIKEQQPLFNKRLRRNRQLCALQL-----NEKRVDVVYAKEVDFSRAPNLFGLFANRR 150 A L+K QP N++LRRNR+LC +L + R+++V+A ++DF R +L+G F RR Sbjct: 312 AELVKRLQPTHNRQLRRNRELCTWRLATDIVGDWRLELVHAADLDFGRRDDLYGFFRTRR 371 Query: 151 AALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQSL 210 A L+ +A + LC LLGLE +G CF LKRC GAC G ES + HALRL ++L Sbjct: 372 EATNRLRALARDHALCPPLLGLEKPPQGARCFDFQLKRCRGACHGGESPQAHALRLIEAL 431 Query: 211 ERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT--PAGFDHDG 268 L+V W W G V L+E H++ W WLG L+ PA FDHD Sbjct: 432 HALKVEHWTWPGPVGLREG----EAIHVVDGWRWLGTATDEAMLADLLEAGRPA-FDHDI 486 Query: 269 YKILCK 274 YKIL K Sbjct: 487 YKILVK 492 >UniRef50_Q21VB4 DNA polymerase III, epsilon subunit n=7 Tax=Betaproteobacteria RepID=Q21VB4_RHOFD Length = 476 Score = 197 bits (500), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 115/288 (39%), Positives = 168/288 (58%), Gaps = 19/288 (6%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQ 76 P L + + D+P GVY+F+GE +PLYIGKS+ +RSRVL+H R P E M ++ Sbjct: 187 PPQLETRVADIPESVGVYIFYGEG-PLPLYIGKSIKLRSRVLAHFQAASRAPREMRMAQE 245 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK-----RVDVVYA 131 RRI W+ TAGEIGALLLEARL+KE+QP +N+RLRR LCA +L + + +V Sbjct: 246 IRRIEWLETAGEIGALLLEARLVKERQPAYNRRLRRESTLCAWRLADDPLARPLLSLVRG 305 Query: 132 KEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAG 191 + + ++G++ ++ AL +L+ +AD Q LC LGLE +GR CF + RC G Sbjct: 306 EALQPQEFGQMYGVYRSKNQALSSLRELADSQGLCLQALGLES-GKGR-CFAHQIGRCQG 363 Query: 192 ACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQH--PEMTQYHIIQNWLWLGAVN 249 CCG+ES E H LRL+ +L + +++ WP+ G V L+E + E T HI W L V+ Sbjct: 364 VCCGEESPERHHLRLQLALAQQKLLVWPYPGKVGLREYNARSERTDIHIFDQWCHLATVH 423 Query: 250 SLEEATTLI--RTPAGFDHDGYKILCKPLLS---GNYEITELDPANDQ 292 E T + R+ FD D Y++L K + + G +E+ + Q Sbjct: 424 DETELTDALGSRSTLAFDLDTYRLLLKHIAAPGKGKFELIDWTEKQQQ 471 >UniRef50_Q1LGD6 DNA polymerase III, epsilon subunit n=5 Tax=cellular organisms RepID=Q1LGD6_RALME Length = 530 Score = 190 bits (483), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 105/257 (40%), Positives = 154/257 (59%), Gaps = 16/257 (6%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQSRRISWI 83 L+D+P RPGVYLF+G+ D +PLY+GKS+++R R+ +H E + R RR+ W Sbjct: 223 LDDVPDRPGVYLFYGDDD-VPLYVGKSIHLRQRIRAHFAGDHSNAREMRLSRSVRRVEWR 281 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK------RVDVVYAKEVDFS 137 T GEIGALL EA L+K +PL N LR+N +L + ++ + R D + VDFS Sbjct: 282 ETGGEIGALLSEAHLVKTLRPLHNHLLRQNTELFSWEMLDGLPAPRLRSD----RHVDFS 337 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR-GRACFRSALKRCAGACCGK 196 R L+G F +R +A L+++ADE +LC L LE +R G CF L RCAGAC G+ Sbjct: 338 RHAALYGAFPSRASAQARLRSLADEHRLCLATLMLEGTTRRGSPCFARQLHRCAGACTGE 397 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 ES H R +++ + + WP+ GA+A +E + +HII++W +LG+ +LE+A Sbjct: 398 ESQTAHRERTVEAMASMAIQRWPFAGAIAWREASGDRFPWHIIEDWCYLGSAPTLEDAAR 457 Query: 257 LIRTPAGFDHDGYKILC 273 + PA FD D Y+IL Sbjct: 458 QLVAPARFDIDTYQILA 474 >UniRef50_B3R8V7 DNA polymerase III, epsilon subunit + GIY-YIG endonuclease (Modular protein) n=2 Tax=Burkholderiales RepID=B3R8V7_CUPTR Length = 532 Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 110/257 (42%), Positives = 155/257 (60%), Gaps = 16/257 (6%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQSRRISWI 83 L D+P PGVY+F+G+ D +PLY+GKSV++R R+ +H R + + R RR+ W Sbjct: 221 LEDVPASPGVYIFYGDQD-VPLYVGKSVHLRQRIGAHFSGDYRYGKDMRLARLVRRVEWR 279 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK------RVDVVYAKEVDFS 137 T GE GALLLEA+L+K QP+ N+ LRRN +L A +L ++ R D ++ DF Sbjct: 280 ETGGETGALLLEAQLVKAMQPVHNQMLRRNTRLYAWELPQQLPVPRLRSD----RDTDFC 335 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR-GRACFRSALKRCAGACCGK 196 R +LFG+F +R AA L+ +A+E LC L LE +R G CF + RCAGAC G Sbjct: 336 RHRDLFGVFGSRGAAEARLRALAEEHGLCMATLSLEKTTRRGSPCFARQVHRCAGACVGA 395 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 ES EH RL +L + ++ WP+ GAVA +EQH +H++ W +LG ++LE+A Sbjct: 396 ESPREHRARLAAALGPIALLPWPFDGAVAWREQHGARACWHVVDEWCYLGCADTLEDAGA 455 Query: 257 LIRTPAGFDHDGYKILC 273 L PA FD D Y+IL Sbjct: 456 LAAAPAHFDLDTYQILA 472 >UniRef50_A4SZE6 DNA polymerase III, epsilon subunit n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SZE6_POLSQ Length = 466 Score = 179 bits (455), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 108/272 (39%), Positives = 156/272 (57%), Gaps = 16/272 (5%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLRQ 76 P R ++ +P PG Y+F+G++ T PLYIGKS+++R+RV+ H + E + Q Sbjct: 192 PNIDRDLIDSIPDTPGCYIFYGDNKT-PLYIGKSISLRNRVMGHFQGALTQRKEMKLSLQ 250 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 R I WI T+GE+GAL+LE+RLIKE+ P N +LRR++ LC L E V+ + V Sbjct: 251 IRDIDWIETSGELGALILESRLIKERMPSMNIKLRRSKDLCGWSLVEDESGVLLPQLVTH 310 Query: 137 SR-AP----NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAG 191 + AP NL+GLF ++R A L+ IA + LC LLGLE G++CF +K+C G Sbjct: 311 HQLAPGLQENLYGLFYSKREAHSYLKAIAKKHHLCEALLGLEKRVEGKSCFGYQVKQCGG 370 Query: 192 ACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSL 251 AC H L+L+ LE ++ WP+ G +A+KE EM +I W +LG + Sbjct: 371 ACLNLTPITLHNLQLKTVLELFKIQVWPYSGPIAIKEGG-EMI---VIDKWCYLGTAINQ 426 Query: 252 EEATTLIRT-PAGFDHDGYKILCKPLLSGNYE 282 +E L + A FD D YKI+ K LSG Y+ Sbjct: 427 DELYELAESGDAEFDLDIYKIV-KKALSGAYK 457 >UniRef50_D0L0M1 DNA polymerase III, epsilon subunit n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0M1_HALNC Length = 481 Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 100/263 (38%), Positives = 138/263 (52%), Gaps = 10/263 (3%) Query: 21 PEHLR-SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLR 75 P HL ++++P PGVYL +G+ +PLYIGKS+++R RVL H R E + + Sbjct: 201 PPHLAPERIDEIPDTPGVYLMYGDG-ALPLYIGKSIHLRRRVLDHFRNDHREQKEMRLAQ 259 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVD 135 + I WI T GE+ ALLLE+RLIK PLFN++LRR R LC V D Sbjct: 260 AVQHIDWIETPGELSALLLESRLIKTLSPLFNRKLRRTRDLCTWHWVFGNVQPPRLLRGD 319 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 + +G F + A Q L+ +A + LC LGL+ S CF +KRC G C G Sbjct: 320 DVIPGSCYGPFRHATQAKQVLRELAAKHGLCDIRLGLQ--SGSGPCFAHQIKRCRGVCVG 377 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEM-TQYHIIQNWLWLGAVNSLEEA 254 +ES +H LRL +LE LR+ WP+ G V L E +H+I W+ G ++ E Sbjct: 378 QESPMQHDLRLATALEELRIKQWPYDGPVVLHESDDHTGASWHVIDQWVHWGTAHNEAEL 437 Query: 255 TTLIRTP-AGFDHDGYKILCKPL 276 ++ P FD D Y IL + L Sbjct: 438 DAVLEHPRPNFDRDTYLILLRHL 460 >UniRef50_A4AB96 Excinuclease ABC subunit C n=3 Tax=unclassified Gammaproteobacteria RepID=A4AB96_9GAMM Length = 416 Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 100/273 (36%), Positives = 146/273 (53%), Gaps = 28/273 (10%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQSRRISWI 83 LN P PGVY F+ E DT+ LYIGKS++I +R+ SH E M+ RI Sbjct: 95 LNAAPRCPGVYRFYSEEDTL-LYIGKSIDIGTRLNSHFADAREPGRQQRMMSAVHRIDCQ 153 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF----SRA 139 TAGE+GALL+E IK + PL+N+R RR+R+L +L E + DF R Sbjct: 154 LTAGEVGALLIENAAIKAETPLYNRRQRRSRKLWTQRLQEDVEGFLQVIPSDFCPAGERI 213 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA-CFRSALKRCAGACCGKES 198 ++FGLF +R+ +L+++A + LC +LG E RGR CF + RC GAC GKES Sbjct: 214 ESVFGLFRSRKHIDNSLRSLARDNGLCLRMLGAE---RGRGPCFGHQVGRCHGACAGKES 270 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMT-------------QYHIIQNWLWL 245 + H RL Q+L++ R+ WP+ G V L+E+ + + Q+H+I +W +L Sbjct: 271 ADAHNSRLLQALDKQRIAAWPFAGPVLLQEERDKDSRYTGESSPLQPKRQFHLINHWSYL 330 Query: 246 GAVNSLEEATTLIRTPAG--FDHDGYKILCKPL 276 G + A + + FD D Y+I + L Sbjct: 331 GTFERRDRARQAAKRDSDLIFDRDTYRIAVRSL 363 >UniRef50_A3JBF5 Putative uncharacterized protein n=2 Tax=Marinobacter RepID=A3JBF5_9ALTE Length = 483 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 110/281 (39%), Positives = 157/281 (55%), Gaps = 17/281 (6%) Query: 21 PEHLR-SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLR 75 P HL L +LP PGVY F+GE+D + LY+GKS NI RV SH + + Sbjct: 194 PSHLPLDTLQELPRGPGVYRFYGENDAL-LYVGKSTNIAQRVASHFSGDHNSTRGVRISE 252 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAK--- 132 RR+ W TAGE+GALLLE + IK +PLFN+R R + L +++L + A+ Sbjct: 253 SLRRVDWTETAGELGALLLELKQIKGLRPLFNRRSRAAKNLVSIELTTNAQGYLQARLIR 312 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGA 192 E+D R + +GLF ++R A +AL +IA + +LC LLGLEP G CF+ AL RC GA Sbjct: 313 EIDPGRLGDYYGLFRSKRDAERALASIAAKNELCNRLLGLEPEHSG-PCFQRALGRCQGA 371 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQH--PEMTQYHIIQNWLWLGAVNS 250 C G+E + LR++ + LR+ WPW+G VA+ E++ T ++ NW+ + V+ Sbjct: 372 CEGREDPLRYNLRMQIAFHSLRLQTWPWKGPVAIIERNEISHKTDVLVVHNWVHVATVHD 431 Query: 251 LEE--ATTLIRTPAGFDHDGYKILCKPLLS---GNYEITEL 286 E + +L FD D YK+L K LL G + I L Sbjct: 432 DHELDSLSLGGQAVNFDLDSYKLLAKALLGKDRGQFRIQPL 472 >UniRef50_C6NVW4 DNA polymerase III epsilon subunit n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVW4_9GAMM Length = 475 Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 106/261 (40%), Positives = 143/261 (54%), Gaps = 14/261 (5%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPD----EAAMLRQSRRISWI 83 L+ LP RPGVYL + E+D++ LY+GKS+ +R RV H E +++Q RR+ WI Sbjct: 197 LDALPDRPGVYLCYDEADSL-LYVGKSIRLRERVWDHFYAATSQQREMRLVQQIRRLEWI 255 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ---LNEKRVDVVYAKEVDFSRAP 140 T E+ ALLLEARLIKE+QP+ N+RLRR L + + +V ++ D Sbjct: 256 ETPTELSALLLEARLIKERQPILNRRLRRRENLFTIAWEGIERGSPRIVPLRDCD---GG 312 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 L+G FAN A Q+L+ +A LC LGLE + G CF LK+C GACCG ES Sbjct: 313 ELYGSFANAYRARQSLRRLARRHGLCLKALGLEKPTSG-PCFAHQLKQCRGACCGAESRL 371 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGA-VNSLEEATTLIR 259 H LRL +L LR+ WPW G + L E+ YH++ W+ G + + AT R Sbjct: 372 LHDLRLSAALRHLRIEHWPWDGPMVLVEEGGGQRLYHLLWQWIHCGYRADPADLATLWER 431 Query: 260 TPAGFDHDGYKILCKPLLSGN 280 FD D Y+I C LS N Sbjct: 432 REGEFDMDIYRI-CFNALSRN 451 >UniRef50_Q3BRX4 Putative excinuclease subunit n=1 Tax=Xanthomonas campestris pv. vesicatoria str. 85-10 RepID=Q3BRX4_XANC5 Length = 161 Score = 146 bits (369), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 74/161 (45%), Positives = 105/161 (65%) Query: 126 VDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSA 185 + +V+ E D + P L+GL+++ RAA +AL+ +AD +LCYGL GLE + GR CFR+ Sbjct: 1 MSIVHLAERDPAVIPWLYGLYSSPRAAQEALRRLADRDRLCYGLPGLERATDGRPCFRAM 60 Query: 186 LKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWL 245 LKRCAGAC G ES +H +RLR +LE L WP+ GAVALKE+ ++ Q+H+++NW +L Sbjct: 61 LKRCAGACHGAESLGDHEMRLRAALEHLEQAVWPFPGAVALKEEGKQLRQFHVLRNWHYL 120 Query: 246 GAVNSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITEL 286 G+ SL A L P FD D Y+IL K L + + + L Sbjct: 121 GSATSLAAARKLKTAPGDFDRDCYRILRKGLQTHLHNVVLL 161 >UniRef50_C0N1K0 Exonuclease family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N1K0_9GAMM Length = 488 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 103/277 (37%), Positives = 148/277 (53%), Gaps = 22/277 (7%) Query: 21 PEHL-RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLR 75 P H+ +S ++ LP G+Y F+ + + LYIGKSVNIR RVLSH + E + + Sbjct: 192 PSHVSQSDIDLLPEAAGIYRFYDANGGL-LYIGKSVNIRERVLSHFGQDHQHGKELDISQ 250 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-----VDVVY 130 Q I++ T + GA LLE IK P FN+R + ++L L L + + Sbjct: 251 QLHHITFQQTPSDFGAQLLENTEIKHYSPRFNRRQTKTKKLYQLTLTTDKQGYHHLKTEV 310 Query: 131 AKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCA 190 A + + +GLF +R+ A + + + D +LC L G+E RG ACF LK+C Sbjct: 311 ADMTEINTITQRYGLFRSRKQAEKKMLELIDTHRLCQKLCGIEKSQRG-ACFGYQLKKCR 369 Query: 191 GACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHP-----EMTQYHIIQNWLWL 245 GACCG ES E + LRL+ +L +L+ WPW G + + E+HP + +H+I W +L Sbjct: 370 GACCGDESAETYNLRLQLALAQLKNQQWPWSGPIVV-EEHPVHDDWDDVIFHLIDQWCYL 428 Query: 246 GAVNSLEEA-TTLIR---TPAGFDHDGYKILCKPLLS 278 G V EE TL R TP FD D YKIL + LL+ Sbjct: 429 GQVIDNEECLATLSRRQHTPVSFDLDAYKILLRFLLT 465 >UniRef50_B9Z6P2 DNA polymerase III, epsilon subunit n=2 Tax=Chromobacterium group RepID=B9Z6P2_9NEIS Length = 476 Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 100/261 (38%), Positives = 143/261 (54%), Gaps = 21/261 (8%) Query: 27 FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQSRRIS 81 L+ LP PGVYL D +PLY+G+ N+R +VL+H D+A + RR+ Sbjct: 194 LLDSLPDVPGVYLLL-GDDGLPLYVGRGANLRRQVLAHFYA-DKAHGKTLHIAEPIRRVE 251 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK-----RVDVVYAKEVDF 136 W T GE GA+LLE + I+ +P N+R +LC++QL E R +V A E+DF Sbjct: 252 WRETLGEFGAMLLELQWIRAHRPRHNRRGGPGDELCSIQLGEGADGFVRPRIVLAHELDF 311 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS--RGRACFRSALKRCAGACC 194 SR +L+GLF + R A + LQ +A Q LC +LG+E ++ +G C C GAC Sbjct: 312 SRTADLYGLFRHPREARKMLQDMARAQGLCQAVLGVEQMTSRKGAPCGGFQAGLCRGACI 371 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQ---YHIIQNWLWLGAVNSL 251 G+E +H RL +L R+RV WP+ GAVA+ E E+T H+ W +LG ++ Sbjct: 372 GREPAMQHNTRLMSALSRVRVKNWPFPGAVAVVEWD-EVTGERVEHVFDRWCYLGTRHAA 430 Query: 252 EEATTLIRTPAGFDHDGYKIL 272 E TL P+ FD D YK+ Sbjct: 431 SE--TLEGQPS-FDLDSYKLF 448 >UniRef50_Q1YU82 DNA polymerase III, epsilon subunit n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YU82_9GAMM Length = 528 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 80/246 (32%), Positives = 134/246 (54%), Gaps = 19/246 (7%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRIS 81 S + LP GVY F+ + + LY+GKS++IR+RV+SH P + + + I Sbjct: 211 SDIKKLPASAGVYYFYDANGAL-LYVGKSIHIRNRVMSHFSQDHSNPKDLQINNKLAHID 269 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVD----VVYAKEVDFS 137 + T ++GA + E+ IK PL+N+RLR+ ++L + +E R + A E+D Sbjct: 270 FEKTPSDLGAQIRESNQIKALYPLYNRRLRKTKKLYQYRCDEDRNGYQRIAIEAVELDSD 329 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEP-------LSRGRACFRSALKRCA 190 A FGLF + R A + ++ +AD LC+ LLGLE + + CFR+ LK+C Sbjct: 330 SADERFGLFRSPRQASKQIEKLADHYFLCHKLLGLESSTATTSVATNQKPCFRAQLKKCF 389 Query: 191 GACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKE---QHPEMTQYHIIQNWLWLGA 247 GAC G ES E + R+ +L+ ++ WP+ G + ++E Q PE +H++ NW ++ Sbjct: 390 GACHGAESPENYNERVSAALKTYQLKMWPYPGPILIEERDMQEPEHVAFHVVHNWRYIAK 449 Query: 248 VNSLEE 253 + +E+ Sbjct: 450 LTLIED 455 >UniRef50_Q5P3L6 Nuclease subunit Cho of the excinuclease complex (UvrC homolog protein) n=2 Tax=Rhodocyclaceae RepID=Q5P3L6_AZOSE Length = 469 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 92/259 (35%), Positives = 134/259 (51%), Gaps = 15/259 (5%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAAMLRQSRRISWIC 84 L +P PGVY F GE+D + LYIG+S ++R+RV+ H R EA + RQ RR+ W Sbjct: 196 LEGVPDAPGVYSFFGENDRL-LYIGRSASLRARVMEHFSPGRADSEAGLARQVRRVEWEE 254 Query: 85 TAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-----VDVVYAKEVDFSRA 139 TAGE A L EA L++ ++PL + + L+L +R + V D + Sbjct: 255 TAGEFAASLREADLLRARRPLHARPAVGGEDVFGLRLVPQRKRAPIFERVPLHATDPAAW 314 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 + G F R+ A L+ +A +LC LGLE S AC +RCAG C GKES Sbjct: 315 EAVHGTFRTRKEADSLLRELAQLYQLCPRRLGLEGGSG--ACGAHEARRCAGVCTGKESI 372 Query: 200 EEHALRLRQSLERLRVVCWPWQGAVALKEQ--HPEMTQYHIIQNWLWLGAVNSLEEATTL 257 H RL +L + + WPW GAV ++E+ H +H++ +W LG+ +S E L Sbjct: 373 AAHDARLAGALGSVTLREWPWVGAVVIEERCAHSGCEAFHLVDHWCHLGSADSAEALVAL 432 Query: 258 IRTPAG--FDHDGYKILCK 274 + P FD D Y++L + Sbjct: 433 LHNPPARRFDLDTYRLLVR 451 >UniRef50_C7RR73 DNA polymerase III, epsilon subunit n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RR73_9PROT Length = 484 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 94/281 (33%), Positives = 145/281 (51%), Gaps = 16/281 (5%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPD-EAAMLRQSRR 79 P+ + ++DLP G Y F G +D L + ++ N+R +VL+H + + A++R + R Sbjct: 194 PQIDAAVIDDLPEAAGAYAFLG-ADGRRLLVRRTGNVRQQVLAHFAAANRDTALIRDTWR 252 Query: 80 ISWICTAGEIGALLLE---ARLIKEQQPLFNKRLRRNRQLCALQLNEK-----RVDVVYA 131 I W AGE+GA L E AR + L + +LC+ QL R +V++ Sbjct: 253 IEWRDAAGEVGARLHEIELARATATESGLAAEPGDAAGELCSWQLQRSAGGGFRPQLVFS 312 Query: 132 KEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAG 191 + DF+ A +LFG++ NRR AL+AL+ +AD Q+LC+ LGLE +RG AC K C G Sbjct: 313 ADRDFAVADDLFGVYPNRREALRALRRLADGQRLCHQQLGLEETARGEACSAYRQKNCRG 372 Query: 192 ACCGKESHEEHALRLRQSLERLRVVCWPWQGAVAL--KEQHPEMTQYHIIQNWLWLGAVN 249 AC GKE+ H RL +L + R+ WP++G +AL ++ H+I W +G Sbjct: 373 ACIGKEAAAVHGARLLTALAKFRLRAWPYRGPIALLERDDFGMREDIHLIDRWRHIGTAR 432 Query: 250 SLEEATTLIRTPAG----FDHDGYKILCKPLLSGNYEITEL 286 E + FD + Y+IL + L +G I L Sbjct: 433 CEETLQAYLADGPHWHRRFDPEIYRILSRALQAGKVRIRPL 473 >UniRef50_B7RUJ0 GIY-YIG catalytic domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RUJ0_9GAMM Length = 282 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 91/256 (35%), Positives = 130/256 (50%), Gaps = 17/256 (6%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQSRRISWICTA 86 +P PG+Y F + + LYIGKS+NIRSRV +HL + ML +++ I TA Sbjct: 1 MPDCPGIYRFL-DRNGCALYIGKSINIRSRVKTHLAEARGLSRKHRMLSETKCIDVRPTA 59 Query: 87 GEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS-RAPNL--- 142 GEIGALLLE IK+Q P FN+R R +++ + L R + +S P + Sbjct: 60 GEIGALLLENDAIKKQAPAFNRRQRSIKKMWSYALTSGRGEFCVPTLQSYSMHKPEILAS 119 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 +G + + A +AL+ + LC +LGLE +G CF + RC GAC ES E H Sbjct: 120 YGAYTSPSRAKKALEQATRDHGLCPRILGLE-AGKG-PCFNFQIGRCRGACADFESAESH 177 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMT-----QYHIIQNWLWLGAVNSLEEATTL 257 RL+ +L WP V L E + T ++H++ NW +LG ++LE A + Sbjct: 178 NRRLKAALRFKGFSAWPVASPVLLHEVASDPTLQPAQEWHLLHNWAYLGTFDTLELARSA 237 Query: 258 IRTPA-GFDHDGYKIL 272 P FD D Y IL Sbjct: 238 KLLPGFMFDKDTYHIL 253 >UniRef50_C4K987 DNA polymerase III, epsilon subunit n=1 Tax=Thauera sp. MZ1T RepID=C4K987_THASP Length = 482 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 87/268 (32%), Positives = 128/268 (47%), Gaps = 23/268 (8%) Query: 26 SFLNDLPTRPGVYLFHGESDTMP-------LYIGKSVNIRSRVLSHL----RTPDEAAML 74 L LP PG+YLFH + + P L++G++ ++R+RV H R +A + Sbjct: 194 GMLEALPDAPGLYLFHAQPEPPPAGARDPALFVGRAQSLRARVREHFGAGARKGRDAELA 253 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV-----DVV 129 + +R+ WI TAGE+ L E L++ P +N+ AL+L +R + V Sbjct: 254 ARVKRVEWIETAGELDTSLRENALLRALAPPYNRPQEPAEAAFALRLLPRRRRAPIYETV 313 Query: 130 YAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRC 189 D + +L G+F NRR A L+ +A +LC LGLE S C A +RC Sbjct: 314 AIAGTDPADWHDLHGVFRNRREADNLLRELALLYRLCPRRLGLEGGSG--PCTAHAARRC 371 Query: 190 AGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKE---QHPEMTQYHIIQNWLWLG 246 AG C +E+ EEH RL +L + V WPW G VA++E P Q + W LG Sbjct: 372 AGVCARRETPEEHDARLAGALAGVGVKPWPWAGPVAVEEVRAHGPHRLQ--VFDRWCHLG 429 Query: 247 AVNSLEEATTLIRTPAGFDHDGYKILCK 274 + A L P FD D ++IL + Sbjct: 430 SAQDEAGALALAAAPRAFDADVWRILAR 457 >UniRef50_C1DBV5 Probable DNA-directed DNA polymerase III n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DBV5_LARHH Length = 493 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 80/248 (32%), Positives = 118/248 (47%), Gaps = 14/248 (5%) Query: 19 EYPEHLRSFLND-LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSH----LRTPDEAAM 73 E PE + + L D LP PGV+ T+ L++GK+ N+R+ VL + +R EA + Sbjct: 186 ELPEGVGAGLVDHLPDVPGVFRLMAADGTV-LHVGKAANLRASVLRYFQPRVRNQKEARL 244 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKE-QQPLFNKRLRRNRQLCALQLNEKRVDVVYAK 132 + + W T GE GA L E R++ + PL + R + + +L + Sbjct: 245 AARVASVVWDETLGEFGAALREVRILGQLPAPLAGGKGRADETALSWRLVADEQGYLGPV 304 Query: 133 EVDFS-----RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALK 187 V + A FG+F N R A + L T AD KLC LGLE GR C +L Sbjct: 305 PVPLAEALAGHAGRCFGVFRNPREAQRLLATFADSYKLCCKRLGLEQSRSGRPCSAHSLG 364 Query: 188 RCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQH--PEMTQYHIIQNWLWL 245 RC GAC G+ES + RL L R + WP+ A+A+ EQ + H+ +W +L Sbjct: 365 RCRGACLGRESAAQFNTRLESVLARHALPSWPFDDALAVVEQDVVTGRCERHLFADWRYL 424 Query: 246 GAVNSLEE 253 G+ + E Sbjct: 425 GSFTADGE 432 >UniRef50_Q1CZB4 GIY-YIG catalytic domain protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1CZB4_MYXXD Length = 404 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 101/213 (47%), Gaps = 20/213 (9%) Query: 10 LEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP- 68 +E AA++ H+R + RPGVY G SD + LY+GKSV +R+R+LS+ R Sbjct: 44 MESRVAALFA---HVREHAEN---RPGVYRMLGPSDEV-LYVGKSVRVRTRLLSYFRAEA 96 Query: 69 --DEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV 126 A ++ + RI W T E ALL E RLIK Q+PL+N +R+R C + L + V Sbjct: 97 HEKAAEIIAHAHRIVWEYTPSEFAALLHEFRLIKSQRPLYNVEHKRDRGHCFIHLTREPV 156 Query: 127 DVVYAKEVDFSRAPNLFGLFANRRAALQALQTIAD--EQKLCYGLLGLE--------PLS 176 + S + +G F R A ++ ++D E + C + PL Sbjct: 157 PRLRVVSRASSERGDYYGPFHGRSAMSDVVRAVSDLLELRDCAADTPMRLADQGQLFPLK 216 Query: 177 RGRACFRSALKRCAGACCGKESHEEHALRLRQS 209 + C R L RC C G + E+ R+ Q+ Sbjct: 217 QEPLCMRGQLSRCLAPCAGGCTRAEYDARVAQA 249 >UniRef50_C0GMH4 Excinuclease ABC, C subunit n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMH4_9DELT Length = 641 Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 102/191 (53%), Gaps = 18/191 (9%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQSRRISWI 83 +D P PGVYL E + + +Y+GK+ N+RSRV S+ R+ P ML + ++ +I Sbjct: 44 SDFPRDPGVYLMKDEQNRI-IYVGKAKNLRSRVSSYFRSSRDPSPKTRVMLGRVLQVDYI 102 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR----VDVVYAKEVDFSRA 139 T E ALLLEA LIK+ +P +N LR ++Q +L++ R +++ + D S Sbjct: 103 TTTSEKEALLLEASLIKKHRPRYNIVLRDDKQYVLFRLDKSRPYPALELTRSARRDGS-- 160 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCY-GLLGLEPL-SRGRACFRSALKRCAGACCGKE 197 FG F + AA + ++ I +L Y G + +R R C + ++RC G CC Sbjct: 161 -VYFGPFTSAAAARETMKVI---NRLFYLRKCGHKKFRNRVRPCLQHFIRRCPGPCCLDV 216 Query: 198 SHEEHALRLRQ 208 S EE++ +R+ Sbjct: 217 STEEYSREIRR 227 >UniRef50_A4XIQ3 UvrABC system protein C n=2 Tax=Clostridia RepID=UVRC_CALS8 Length = 593 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 71/252 (28%), Positives = 120/252 (47%), Gaps = 35/252 (13%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRR 79 L+ L +LPT PGVY+ E+ + +Y+GK+VN+R+RV + + TP M+++ + Sbjct: 4 LQEKLANLPTTPGVYMMKDENGKV-IYVGKAVNLRNRVRQYFQNSDMTPKTRLMVKKIKD 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSR 138 +I T E+ AL+LE LIKE +P +N LR ++ +++ NE +V ++V+ Sbjct: 63 FEYIVTDTEVEALILECNLIKEYRPKYNVLLRDDKNYQYIKITNEMFPRLVTTRKVEKDG 122 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGL--------EPLSRGRACFRSALKRCA 190 A FG + + + Q ++ L L L + L +GR C ++RC Sbjct: 123 AK-YFGPYVSGYSVKQTIE-------LLKSLFMLRTCKRKFPDQLGKGRPCLNFYIERCL 174 Query: 191 GACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGA--- 247 G C G EE+ Q L V +G ++E +M +Y N ++ A Sbjct: 175 GVCKGDIPEEEY-----QKLVEKAVKVLSGKGDEIVEELKKKMFEYA--DNLMFEKAQEI 227 Query: 248 ---VNSLEEATT 256 + SLE+ T Sbjct: 228 KNKITSLEQIIT 239 >UniRef50_A0LZ46 Exonuclease family protein n=14 Tax=Bacteroidetes RepID=A0LZ46_GRAFK Length = 457 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 72/263 (27%), Positives = 115/263 (43%), Gaps = 34/263 (12%) Query: 27 FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT--PDEAAMLRQSRRISWIC 84 L +LP+ GVY FH E+ + +Y+GKS NIR RV H P M ++ +S+ Sbjct: 189 ILEELPSETGVYYFHDENSEI-IYVGKSRNIRKRVNQHFTNDNPKSREMQKKVASVSYEL 247 Query: 85 TAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFG 144 T E+ ALL E + IKE +P +N+ L+R+ AL + K ++ Sbjct: 248 TGNELIALLKENQEIKELKPRYNRALKRDIFSHALYQFTDDDGYINLKIGRANKTKKNIT 307 Query: 145 LFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHAL 204 F++ R+A +L+ E +LC L GL + CF +K C GAC G+E + Sbjct: 308 TFSSLRSAKNSLEKWVTEFELCERLAGLHGGTGN--CFAYTIKSCHGACIGEEPPISYNE 365 Query: 205 RLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPAGF 264 R+ + ++R + QN L +G ++E + L+ F Sbjct: 366 RVNKLIDR----------------------HSYNNQNMLLIGRGREVDEKSALLIEDGDF 403 Query: 265 DHDGYKILCKPLLSGNYEITELD 287 GY + N++I LD Sbjct: 404 KGTGY-------FNLNHQINNLD 419 >UniRef50_Q2FPC6 UvrABC system protein C n=16 Tax=Archaea RepID=UVRC_METHJ Length = 520 Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 11/180 (6%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISWI 83 L +P PG Y F E+ T+ LY+GK+ N++ RV S+ + TP ++ R I I Sbjct: 6 LTTIPEEPGCYQFKDETGTI-LYVGKAKNLKKRVSSYFQKKSITPRIDILVSLIRDIDVI 64 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSRAPNL 142 T+ E+ AL+LE LIK+ QP +N L+ + +Q+ N+ + A++ + L Sbjct: 65 VTSSEVEALILENNLIKKYQPKYNIDLKDAKSYAFIQISNDPFPRIGIARDRTVKKTGTL 124 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 +G F + Q L+ + K + L + +++ RAC RS L CA C GK S E+ Sbjct: 125 YGPFVSAAERDQILKFV----KQTFHLRTCKKMTK-RACLRSHLGTCAAPCTGKISEPEY 179 >UniRef50_Q26FQ2 DNA polymerase III, epsilon subunit n=1 Tax=Flavobacteria bacterium BBFL7 RepID=Q26FQ2_9BACT Length = 466 Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 98/203 (48%), Gaps = 16/203 (7%) Query: 20 YPEHL-RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL--RTPDEAAMLRQ 76 +P HL R+ + LP PGVYLF + + +YIGK++NIR RVLSH +T M ++ Sbjct: 189 FPPHLDRTQFDQLPETPGVYLFKDQGHKI-IYIGKAINIRKRVLSHFYSKTSKSYLMCQE 247 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFN---KRLRRNRQLCAL--QLNEKRVDVVYA 131 I I T E+ ALL E+ LIK+ P FN K+ + Q+ QL + V Sbjct: 248 IHHIDHIVTGNELVALLQESDLIKKHYPKFNVVQKKPKPAYQILHYKNQLGIIQFAVGLV 307 Query: 132 KEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAG 191 K D+S + NR A++ L+ + + LC + ++ LK C G Sbjct: 308 KSYDYSVVTHY-----NRAHAVEQLEQLCADYNLCPRYCSFK--TKDDCTSHYKLKNCKG 360 Query: 192 ACCGKESHEEHALRLRQSLERLR 214 C +E + LR +Q+L+ L Sbjct: 361 VCKKEELVSLYNLRAQQALDSLH 383 >UniRef50_Q72DX8 UvrABC system protein C n=3 Tax=Desulfovibrio vulgaris RepID=UVRC_DESVH Length = 688 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 96/199 (48%), Gaps = 26/199 (13%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRR 79 R L+ +P PGVYL+ ES + +Y+GK+ +R RV S+ R TP AMLR + Sbjct: 3 RPDLSTIPLTPGVYLYKDESGRI-IYVGKARCLRRRVASYFRDVSALTPKTVAMLRHAVT 61 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK----RVDVVYAKEVD 135 I + T E ALLLEA LIK+ +P +N LR ++Q ++ K R+++V D Sbjct: 62 IDTLSTTTEKEALLLEASLIKKHRPRYNIVLRDDKQYVLFRIGAKHPYPRLEIVRKARRD 121 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKL------CYGLLGLEPLSRGRACFRSALKRC 189 R FG F + AA + +TI L +G +R RAC + +C Sbjct: 122 DGR---YFGPFTSASAARETWKTIHRAFPLRRCSDRAFG-------NRVRACLYHHMGQC 171 Query: 190 AGACCGKESHEEHALRLRQ 208 G C + E +A L Q Sbjct: 172 LGPCVNEVPSETYAALLEQ 190 >UniRef50_B5YHU3 Excinuclease ABC, C subunit n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHU3_THEYD Length = 589 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 63/187 (33%), Positives = 100/187 (53%), Gaps = 22/187 (11%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPD----EAAMLRQSRRISWI 83 LN +P+ PGVYLF +S LY+GK+ N+R+R+ S+ ++ D ++ M++ + S+I Sbjct: 4 LNTVPSLPGVYLFK-DSKGKVLYVGKAKNLRNRLKSYFQSDDLDPRKSKMVKLIKDFSYI 62 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYA-KEVDFSRAP-- 140 T+ E AL+LEA LIK+ +P FN LR ++ L R+ VV ++D R P Sbjct: 63 VTSNEFEALVLEANLIKQHKPSFNVLLRDDKSYPYL-----RITVVEEWPKIDVVRKPKK 117 Query: 141 --NL-FGLFANRRAALQALQTIADE--QKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 NL FG + ++ +AL I + C L +P+ R C + +KRC C G Sbjct: 118 DGNLYFGPYVPAQSMWEALSFIRRNFPIRTCKYRLN-KPI---RPCVQYQMKRCPAPCAG 173 Query: 196 KESHEEH 202 S E++ Sbjct: 174 FISREDY 180 >UniRef50_A0M4R6 Protein containing exonuclease domain n=2 Tax=Flavobacteriaceae RepID=A0M4R6_GRAFK Length = 507 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 15/208 (7%) Query: 13 EAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL--RTPDE 70 + AA Y P S LP GVY F + D PLYIGK+ NI+SR+ SH ++ + Sbjct: 181 KTAASYLPPNFKSSDFEKLPITTGVYFFK-DKDGRPLYIGKAKNIKSRIKSHFQEKSNRK 239 Query: 71 AAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFN---KRLRRNRQLCALQLNEKRVD 127 +++++ I + T E+ ALL E+ LI + P +N K++ R L + N+K ++ Sbjct: 240 YKLMQETYSIDYELTGNELLALLRESELILKFFPKYNKAQKKVSRPYTLTSYH-NQKGIE 298 Query: 128 --VVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSA 185 ++ ++ AP + F R A++ ++ + +E +LC GL+ + + C Sbjct: 299 QFALHKNKI----APVSWMKFYTREEAIKFMEFLCEEFQLCPKYCGLQ--TGVKICDHYK 352 Query: 186 LKRCAGACCGKESHEEHALRLRQSLERL 213 + C G C G+ S EE+ R+ +++E + Sbjct: 353 ITNCGGVCKGEVSKEEYNARVEKAIEYI 380 >UniRef50_B8KSX2 Excinuclease cho n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KSX2_9GAMM Length = 142 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 12/128 (9%) Query: 169 LLGLEPLSRGRA-CFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALK 227 +LGLE +GRA CF LKRC GAC G E+ EEH RL +L+ R+ WP+ G + L+ Sbjct: 1 MLGLE---KGRAPCFHYQLKRCDGACAGDETAEEHNARLLSALDGDRIAAWPFPGPLLLR 57 Query: 228 EQ--HP----EMTQYHIIQNWLWLGAVNSLEEATTLIRTPA--GFDHDGYKILCKPLLSG 279 E HP Q++ + +W++ G NS+ A T + FD D Y ++ K L+ G Sbjct: 58 EHTLHPVDPQPPEQFYWVNHWVYHGHFNSINSAQRAADTESRRRFDRDSYHLIMKALVRG 117 Query: 280 NYEITELD 287 E+ LD Sbjct: 118 QVEVLGLD 125 >UniRef50_C9LR57 Excinuclease ABC subunit C n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR57_9FIRM Length = 625 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 15/192 (7%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSR 78 +R+ ++ LP PGVY + + D +Y+GK+VN+++RV S+LR +P AAM+R + Sbjct: 8 IRAKVDALPDSPGVYRWK-DKDGRVIYVGKAVNLKNRVRSYLREDKNRSPKVAAMIRHAA 66 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEKRVDVVYAKEVDF 136 + TA E+ AL+LE LIKE P +N LR ++ + +NEK ++ + + Sbjct: 67 DLDITMTATEMEALILECNLIKELHPKYNISLRDDKSYPYVKITVNEKWPRILVTRNIRR 126 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC--- 193 FG F + + + L I + Y + + R C + + C C Sbjct: 127 DDGAKYFGPFTDVGSLRKTLSLI----RRLYPIRTCRSMKVSRPCLQYHMNLCCAPCWNH 182 Query: 194 CGKESHEEHALR 205 C +E + E+ ++ Sbjct: 183 CTEEQYHEYVVK 194 >UniRef50_C0QPW8 Excinuclease ABC subunit C n=5 Tax=Aquificales RepID=C0QPW8_PERMH Length = 580 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 10/191 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQS 77 E L++ +++ P PGVYLF G+ +YIGK+ NI++R+ HL P E + +S Sbjct: 11 EDLKNLIDEAPQSPGVYLFKGKKGEY-IYIGKAKNIKNRLKGHLNQYRIDPKEKKIFDES 69 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 +I WI T + A +LE LIK+ +P +N RL+ L + + V Sbjct: 70 SKIEWIITKSDYEAFVLENELIKQYKPKYNVRLKSGSGYPMLVITDDEYPTVVISRKFGE 129 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL-SRGRACFRSALKRCAGACCGK 196 FG F R A + + D + L +PL R CF L C+ C K Sbjct: 130 IEGEYFGPFLPARTA----RAMKDLIHKLFRLRTCDPLPKRDIVCFDYHLGLCSAPCVNK 185 Query: 197 ESHEEHALRLR 207 S +++ ++ Sbjct: 186 ISKKDYNFDVK 196 >UniRef50_B4U9X0 UvrABC system protein C n=3 Tax=Aquificaceae RepID=UVRC_HYDS0 Length = 565 Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 84/186 (45%), Gaps = 18/186 (9%) Query: 32 PTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISWICTAG 87 P PGVY+F + +YIGK++NI+ R+L HL+ + EA + S+ + WI T Sbjct: 11 PEEPGVYIFKNQKHY--IYIGKAINIKKRLLQHLKEREQSKKEANIFNHSKELEWIVTRN 68 Query: 88 EIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFA 147 E ALLLE LI+ +P +N L+ + L + V D S FG F Sbjct: 69 EYEALLLEMDLIRTHKPKYNVLLKHGSGYPVILLTDDEYPTVKITR-DTSEKGEAFGPFL 127 Query: 148 NRRAALQALQTIADEQKLCYGLLGL----EPLSRGRACFRSALKRCAGACCGKESHEEHA 203 N AL+ +KL + L E R C L C+G C S E++A Sbjct: 128 NINKALKI-------KKLIHATFRLRTCEEMPKRPTPCMDYHLGLCSGPCANLISKEDYA 180 Query: 204 LRLRQS 209 + ++ + Sbjct: 181 ISVKSA 186 >UniRef50_C1A8T0 UvrABC system protein C n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=UVRC_GEMAT Length = 616 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 90/185 (48%), Gaps = 15/185 (8%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLS-----HLRTPDEAAMLRQSRRISW 82 L LP PGVYL+ + + LY+GK+ +RSRV S H +P AM+R+ R + Sbjct: 7 LPHLPESPGVYLWK-DVEGQVLYVGKAKRLRSRVRSYWAQEHESSPKTRAMVRKVRDLET 65 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ--LNEKRVDVVYAKEVDFSRAP 140 I E AL+LEA LIKE P FN LR ++ ++ +NE V+ + + Sbjct: 66 IVVPSEAHALILEATLIKEYHPRFNIALRDDKSYPYIRVTVNEPFPRVMVTRRL-LDDGA 124 Query: 141 NLFGLFAN---RRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG + + R AL ++ I + Y L G P R C ++KRC C G + Sbjct: 125 RYFGPYTDVGAMRRALNVVKRIFTVRSCHYALPGEAP---ERPCLDYSIKRCKAPCVGYQ 181 Query: 198 SHEEH 202 S E++ Sbjct: 182 SREDY 186 >UniRef50_A6EU25 DNA polymerase III, epsilon subunit n=2 Tax=Bacteroidetes RepID=A6EU25_9BACT Length = 472 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 6/196 (3%) Query: 21 PEHLRS-FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL--RTPDEAAMLRQS 77 P H+ + N LP+ G+YLF + + LY+GK+ NI+ RVLSHL +T M ++ Sbjct: 191 PPHINTEDFNRLPSTAGIYLFKDKKGKI-LYVGKAKNIKKRVLSHLYSKTQKSINMCAET 249 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 + ++ T E+ ALLLE+ I++ P FNK +R + + R+ V + Sbjct: 250 HHLDFVETGNELSALLLESDYIQQFYPKFNKAQKRPVKTFQIISYTNRIGVEQIALGECR 309 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 A N N+ A L L + + LC L+ + C + C G C G E Sbjct: 310 SATNSVYTLYNKIAGLALLTRLCETYNLCPKYCALQ--TTNEPCSHYKITDCYGVCSGNE 367 Query: 198 SHEEHALRLRQSLERL 213 + R+ ++LE L Sbjct: 368 PAVAYNKRVSKALEAL 383 >UniRef50_A0LHP7 Excinuclease ABC, C subunit n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHP7_SYNFM Length = 677 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 99/184 (53%), Gaps = 20/184 (10%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQSRRISWICT 85 P PGVYLF S + LY+GK++++R R+ S+ ++ A++ ++ + ++ T Sbjct: 75 FPHLPGVYLFKDASGAV-LYVGKAIDLRKRIASYFKSTGPIPVKTRALMGKAADMEYVVT 133 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK----RVDVVYAKEVDFSRAPN 141 + E ALLLEA LIK+ +P +N LR ++ AL+++ + R++VV F R Sbjct: 134 SNEKEALLLEASLIKKHRPRYNVVLRDDKNYPALRIDPREPFPRLEVVRR----FQRDGA 189 Query: 142 L-FGLFANRRAALQALQTIAD--EQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 L FG + + A + L+ + +LC G L+R R C +L RC GAC G+ S Sbjct: 190 LYFGPYHSAYALRETLRLLHQLFPLRLCK---GKRLLARERPCLNYSLGRCLGACAGRVS 246 Query: 199 HEEH 202 E++ Sbjct: 247 PEDY 250 >UniRef50_B3QSB2 DNA polymerase III, epsilon subunit n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QSB2_CHLT3 Length = 578 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 73/249 (29%), Positives = 112/249 (44%), Gaps = 31/249 (12%) Query: 21 PEHL----RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEA 71 P H + LN PT+ GVYL D + LYIGKS N++SRV S+ R+ Sbjct: 214 PRHFSKIRNTVLNKFPTKSGVYLMKSAKDEV-LYIGKSKNLKSRVSSYFNQNIDRSEKVV 272 Query: 72 AMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV-DVVY 130 + R+I + T E+ ALLLE++LIK+ +P FN L+R R L +E + Sbjct: 273 ELTHHVRKIDYTLTGSELEALLLESKLIKQYKPRFNTLLKRYRSYPFLTFSEHEFPKLEI 332 Query: 131 AKEVDFSRAPNLFGLFANRRAALQALQTIAD--EQKLCYGLLGLEPLSRGRACFRSALKR 188 A +V+ FG F +L+ LQ + + E+ SR R C L R Sbjct: 333 ALDVE-DGDKEYFGPF----PSLELLQHVVEILERYFKVRKCSDHDFSRARFCIYFDLDR 387 Query: 189 CAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAV 248 C C + ++E ++ L+++R L ++PE+ +I+ L + Sbjct: 388 CFAPCKHPKHYKEAYIK---ELDQIRAF---------LSGKNPEIINV-MIREMKALASE 434 Query: 249 NSLEEATTL 257 N EEA L Sbjct: 435 NLFEEAADL 443 >UniRef50_B7AWB5 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AWB5_9BACE Length = 640 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 102/195 (52%), Gaps = 12/195 (6%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQSRRISW 82 L LP++PGVY+ H ++D + +YIGK+V++++RV + ++ + M+ + Sbjct: 8 LKKLPSKPGVYIMHDKTDAI-IYIGKAVSLKNRVRQYFQSSRNLSVKIQHMVSNIDHFEY 66 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEKRVDVVYAKEVDFSRAP 140 I T E+ AL+LE LIKE +P +N L+ ++ + +NEK V++A+ + ++ Sbjct: 67 IITDSELEALVLECNLIKEHRPKYNTMLKDDKSYPFIKVTVNEKYPRVLFARSMKKDKS- 125 Query: 141 NLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG + + A ++ + ++ C L + + + R C + +C+ C G S Sbjct: 126 RYFGPYTSAGAVKDTIELLCRLYRIRTCSRKLPAD-MCKDRPCLNYHINQCSAPCQGYIS 184 Query: 199 HEEHALRLRQSLERL 213 EE+ +RQ ++ L Sbjct: 185 EEEYKESVRQVIDFL 199 >UniRef50_C6X0K5 Excinuclease ABC subunit C n=9 Tax=Bacteroidetes RepID=C6X0K5_FLAB3 Length = 611 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 15/190 (7%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-------RTPDEAAMLRQSRRI 80 L LP+ PGVY ++ ++D + LY+GK+ +++ RVLS+ RT M+ + R+ Sbjct: 22 LKTLPSEPGVYRYYDKNDQL-LYVGKAKHLKKRVLSYFNKNLPGYRT---RIMVAKIHRL 77 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 E ALLLE LIKE QP +N L+ ++ + + + ++ Sbjct: 78 ETTIVPSEYDALLLENNLIKEHQPFYNVMLKDDKSYPWICIKNEDFPRIFLTRTMIKDGS 137 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEP--LSRG--RACFRSALKRCAGACCGK 196 +G +A R A L TI KL L L P ++ G + C +K C G C Sbjct: 138 EYYGPYARVRPAKVLLDTIKHIYKLRTCTLNLSPPKIAEGKYKVCLEFHIKNCQGPCEML 197 Query: 197 ESHEEHALRL 206 ES E++ L++ Sbjct: 198 ESKEDYDLKI 207 >UniRef50_B9LUM9 UvrABC system protein C n=9 Tax=Halobacteriaceae RepID=UVRC_HALLT Length = 592 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 14/188 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL--RTPDEAAMLRQSRR 79 + +R DLPT PGVY F T LY+GK+VN+R+RV S+ R+ M+ ++ R Sbjct: 4 DAVRERAADLPTEPGVYQFRAGETT--LYVGKAVNLRNRVRSYADPRSGRIRGMVGRADR 61 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRA 139 I + T E ALLLEA LIK +P +N RL+ ++ + + + V ++ +R Sbjct: 62 IEFAVTDTETQALLLEANLIKRLRPRYNVRLKDDKSYPLVAITDHPV-----PRIEVTRD 116 Query: 140 PN----LFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 P +G F ++ ++ I DE +L G + +R R C + C+ C G Sbjct: 117 PEEGAVAYGPFTSKGRVETVVKAIRDEYRL-RGCSDHKYANRDRPCLDYEMGICSAPCTG 175 Query: 196 KESHEEHA 203 + E +A Sbjct: 176 EIDPESYA 183 >UniRef50_B5Y9S9 Excinuclease ABC, C subunit n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9S9_COPPD Length = 595 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 22/209 (10%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQSRRI 80 LR + P PGVYLF+G S + +Y+GK+ ++ +R+ + R+ E ++ + ++ Sbjct: 3 LRESIEQAPHSPGVYLFYGNSGQV-IYVGKASDLHNRLADYARSQPGQKEHLIMSNASKV 61 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR----VDVVYAKEVDF 136 SWI A E +L LE LIK+ P +N L+ + L+++ + V++V K+ Sbjct: 62 SWIIVANERQSLELEETLIKKYAPPYNVLLKDGKGYSYLRIDLSQEYPAVEIVRIKQRKP 121 Query: 137 SRAPNLFGLF---------ANRRAALQALQTIADEQKLCYGLLGLE-PLS-RGRACFRSA 185 LFG F R L+ L IA+E +G+ + PL R R C Sbjct: 122 KPGQLLFGPFVPLRVPDMPGKVRGDLKNLIQIAEE---VFGIRSCKGPLKRRMRPCVYYE 178 Query: 186 LKRCAGACCGKESHEEHALRLRQSLERLR 214 + RC+G C GK S EE+ R++ ++ L+ Sbjct: 179 IGRCSGPCIGKISPEEYKDRVQLFIKFLK 207 >UniRef50_B8DRE6 Excinuclease ABC, C subunit n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DRE6_DESVM Length = 762 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 24/205 (11%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----------TPDEAAML 74 + ++++P PGVYL+ + + LY+GK+ ++R R+ S+ R TP AML Sbjct: 3 KPVMSNIPDTPGVYLYKDAAGRI-LYVGKAKHLRKRIASYFREAAEGAPPPQTPKTLAML 61 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK----RVDVVY 130 RQ+ R+ + T E ALLLEA LIK+ +P +N LR ++Q +L +K R+D+V Sbjct: 62 RQAERLDTLSTTTEKEALLLEASLIKKHRPRYNIVLRDDKQYVLFRLQKKHPYPRLDIVR 121 Query: 131 AKEVDFSRAPNLFGLFANRRAALQALQTI--ADEQKLCYGLLGLEPLSRGRACFRSALKR 188 A D ++ +G F + AA + I A + C LE +R R C + + Sbjct: 122 AVRRDGAQ---YYGPFTSAGAARATWKAIHRAFPLRRCTD-RALE--NRVRPCLYHFIGQ 175 Query: 189 CAGACCGKESHEEHALRLRQSLERL 213 C C EE+A L Q +E L Sbjct: 176 CLAPCVFDVPREEYAA-LVQRVEML 199 >UniRef50_Q5F928 UvrABC system protein C n=29 Tax=Betaproteobacteria RepID=UVRC_NEIG1 Length = 617 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 86/190 (45%), Gaps = 12/190 (6%) Query: 27 FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE----AAMLRQSRRISW 82 FL +LP PGVY F E + LY+GK+VN++ RV + + D A M++Q R I Sbjct: 16 FLKNLPKLPGVYRFFDEGGNV-LYVGKAVNLKRRVSGYFQKNDHSPRIALMVKQVRHIET 74 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNL 142 T E AL+LE IK P +N R ++ L L+ + + Sbjct: 75 TITRSEAEALILENNFIKALSPKYNILFRDDKSYPYLMLSGHQYPQMAYYRGTLKNPNQY 134 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPL---SRGRACFRSALKRCAGACCGKESH 199 FG + N A ++Q + QK+ + L E R R C +KRC C G S Sbjct: 135 FGPYPNSNAVRDSIQVL---QKV-FMLRTCEDSVFEHRDRPCLLYQIKRCTAPCVGHISE 190 Query: 200 EEHALRLRQS 209 E++ +RQ+ Sbjct: 191 EDYCDSVRQA 200 >UniRef50_B7K124 Excinuclease ABC, C subunit n=5 Tax=Cyanobacteria RepID=B7K124_CYAP8 Length = 617 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 16/191 (8%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQ 76 + L + L +LP+ PGVYL + + LYIGKS +RSRV S+ R +P M++Q Sbjct: 12 DDLETRLKELPSEPGVYLMRNQGGEI-LYIGKSKKLRSRVRSYFRPSQPHSPRIGLMVQQ 70 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ---LCAL-QLNEKRVDVVYAK 132 I +I T E AL LEA LIK+ QP FN L+ +++ +C R+ + + Sbjct: 71 VADIEFIVTDTEAEALALEANLIKQHQPYFNVLLKDDKKYPYVCITWSQTYPRIFITRKR 130 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGL-EPLSRGRACFRSALKRCAG 191 ++ R +G + + Q LQ + K + L +PL + R C + +C G Sbjct: 131 RLNNERD-RYYGPYVDTHLLRQTLQLV----KRVFPLRQRPKPLFKDRPCLNYDIGKCPG 185 Query: 192 ACCGKESHEEH 202 C G S E++ Sbjct: 186 VCQGLISPEDY 196 >UniRef50_C7LYI3 Excinuclease ABC, C subunit n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYI3_ACIFD Length = 620 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 15/182 (8%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRR 79 R L +P PG Y F D + +Y+GK+ N+R+RV S+ + +P AML + R Sbjct: 4 RPDLAAIPEAPGSYQFRDGEDRV-IYVGKARNLRARVGSYFQDPRQLSPKTRAMLAVASR 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEK--RVDVVYAKEVD 135 ++WI E ALLLE LIKE P +N RLR ++ + A+ + E+ R + K Sbjct: 63 LTWIVVPSEQDALLLEYSLIKEHHPRYNIRLRDDKSYPMIAVTVGERWPRAMIYRGKR-- 120 Query: 136 FSRAPNLFGLFANRRAALQALQTI--ADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 R FG +A+ AA + L+ + A + C + GR C + RC G C Sbjct: 121 -RRGARYFGPYADAGAAREVLELLRRALPLRTCSPAKLAQHERAGRPCLYFDIGRCVGPC 179 Query: 194 CG 195 G Sbjct: 180 IG 181 >UniRef50_D1BLY6 Excinuclease ABC, C subunit n=5 Tax=Veillonellaceae RepID=D1BLY6_VEIPT Length = 608 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 17/186 (9%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQ 76 E L ++ LPT PGVYL+ + + + +Y+GK++N+R+RV S++R P AM+++ Sbjct: 4 EELLEKVSHLPTTPGVYLWRDQYNRI-IYVGKAINLRNRVRSYVRNDANRAPKVTAMMKR 62 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQL----CALQLNEKRVDVVYAK 132 + + I T E+ AL+LE LIKE +P +N RLR ++ ++Q + RV + Sbjct: 63 AVDVEVIQTKTEMEALILENTLIKEHEPKYNIRLRDDKTYPYVKISVQEDYPRVYMTRRL 122 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGA 192 E D ++ FG F + + L+ I + Y L + + R C + + C Sbjct: 123 ERDGAK---YFGPFTDVTSVHVVLKLI----RQYYPLRTCKSMKVERPCLQYHMHYCEAP 175 Query: 193 CCGKES 198 C K S Sbjct: 176 CFNKIS 181 >UniRef50_C6E9G2 UvrABC system protein C n=3 Tax=Geobacter RepID=UVRC_GEOSM Length = 649 Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 98/188 (52%), Gaps = 14/188 (7%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQSRR 79 ++ + + P+ PGVYL DT+ +Y+GK+ N++ RV S+ ++ M++ Sbjct: 4 QAMIENFPSSPGVYLMKSADDTV-IYVGKARNLKKRVRSYAGDTRDSRIHIRFMVQLVHS 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK----RVDVVYAKEVD 135 + ++ T E AL+LE LIK+ +P +N LR ++ +L+++ K R+ +V D Sbjct: 63 VDYLVTDTEKEALILENTLIKQHRPKYNINLRDDKTYFSLRMDMKEQFPRLSIVRKIPSD 122 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 +R FG +A+ AA + L+ + L + L ++R R C +K+C+ CCG Sbjct: 123 GAR---YFGPYASATAAKEVLKQLYKMFPLRHYPLAT-CMARKRPCLYHQIKQCSAPCCG 178 Query: 196 KESHEEHA 203 S E+A Sbjct: 179 LISAAEYA 186 >UniRef50_Q3ZYA3 UvrABC system protein C n=5 Tax=Dehalococcoides RepID=UVRC_DEHSC Length = 607 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 18/200 (9%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQ 76 E L++ + LP PGVYL + +Y+GK+ ++ RV S+ TP ++ Q Sbjct: 4 ETLQNQIASLPENPGVYLMKNAQGEI-IYVGKAAVLKDRVKSYFVPPSRLTPKTCQLVSQ 62 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ--LNEK--RVDVVYAK 132 + ++ T E AL+LE LIK +P FN RL+ ++ L+ LNEK R+ + + Sbjct: 63 INELEYLITGSEQEALILELNLIKRHRPYFNVRLKDDKGFPYLKITLNEKWPRIYITRSM 122 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCA 190 D R FG FAN R+ LQ + + + C EP R C + +C Sbjct: 123 ADDGGR---YFGPFANTRSVRHTLQVLKELFRFRSCN---RTEPEKHSRPCLEYDIHQCL 176 Query: 191 GACCGKESHEEHALRLRQSL 210 C GK S ++ + Q++ Sbjct: 177 SPCTGKISKSDYDHLISQAI 196 >UniRef50_B0S0L4 UvrABC system protein C n=2 Tax=Finegoldia magna RepID=UVRC_FINM2 Length = 608 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 8/189 (4%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE----AAMLRQSRR 79 ++ L +P +PGVY+ H ++D + +Y+GK++++R RV + + + AAM+ Sbjct: 4 IKKELQKVPHKPGVYIMHDKNDEI-IYVGKAIDLRRRVGQYFDSSKKLAKVAAMVSHVEY 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSR 138 +I E AL+LE+ LIK+ P +N LR ++Q +++ NEK V+ + V + Sbjct: 63 FEYIIVNNECEALVLESNLIKKNSPKYNIVLRDDKQYPYIKITNEKFPRVLKTRRVLKDK 122 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR-GRACFRSALKRCAGACCGKE 197 A FG F N A + I + K+ L + + R C + RC G C Sbjct: 123 AK-YFGPFPNAYAVNDIIDLIHETYKIRTCNLNFDKGQKLKRPCLNYYINRCDGMCVYDV 181 Query: 198 SHEEHALRL 206 + E++ L Sbjct: 182 NEEDYNKEL 190 >UniRef50_Q2S280 UvrABC system protein C n=1 Tax=Salinibacter ruber DSM 13855 RepID=UVRC_SALRD Length = 633 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 12/198 (6%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE-----AAMLR 75 PE L L+ LPT PGVY F + +++ LY+GK+ N+R+RV ++ + + M++ Sbjct: 9 PEVLVQKLDALPTDPGVYKFLDDEESV-LYVGKAKNLRNRVRTYFQQSRQRDGRIEVMVQ 67 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVD 135 ++ + I T E AL+LE IKE QP +N LR ++ + + +R V+ Sbjct: 68 KAVDVDIIVTDTEAEALILENNQIKELQPRYNVNLRDDKTYPYICIKNERFPRVFKTRTV 127 Query: 136 FSRAPNLFGLFAN---RRAALQALQTIADEQKLCYGLLGLEPLSRGR--ACFRSALKRCA 190 FG +A+ + + A++++ + + C L E + G+ C + + C Sbjct: 128 KQDGSEYFGPYADVSKMNSMMDAIRSVF-QLRTCSLDLTEEKIEAGKYDVCLQHHIDNCK 186 Query: 191 GACCGKESHEEHALRLRQ 208 C GK+S ++ + Q Sbjct: 187 APCVGKQSEADYMETIEQ 204 >UniRef50_A3DJ07 UvrABC system protein C n=15 Tax=Bacteria RepID=UVRC_CLOTH Length = 625 Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 12/189 (6%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRRISW 82 L LP +PGVY+ E+ + +Y+GK+V +++RV + + TP AM+ + + Sbjct: 8 LKKLPDKPGVYIMKDENGEI-IYVGKAVVLKNRVRQYFQSLSNQTPKVRAMVAHIKEFEY 66 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLR--RNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 I T E+ AL+LE LIK+ +P FN L+ +N + +NE ++ + V+ A Sbjct: 67 IVTDTELEALILECNLIKKHRPKFNILLKDDKNYPYIKVTMNEDFPRILMTRRVEKDGA- 125 Query: 141 NLFGLFANRRAALQALQTIAD--EQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG + + A + + + K C +L + + +GR C + +C G C G S Sbjct: 126 KYFGPYTSAYAVRETIDLVKKLFPVKTCSKVLPRD-IGKGRPCLNYHIYQCLGPCQGNVS 184 Query: 199 HEEHALRLR 207 EE+ ++ Sbjct: 185 KEEYRFMMQ 193 >UniRef50_Q180Q8 UvrABC system protein C n=8 Tax=Clostridiales RepID=UVRC_CLOD6 Length = 605 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 15/196 (7%) Query: 17 IYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEA 71 +++ EHL+ LP+ PGVYL + D + +Y+GK++++++RV + + T Sbjct: 1 MFDIQEHLKK----LPSEPGVYLMKDKYDHI-IYVGKAISLKNRVRQYFQSSKNHTSKVK 55 Query: 72 AMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL--NEKRVDVV 129 +M++ + +I T E+ AL+LE LIK +P +N LR ++ +++ NE ++ Sbjct: 56 SMVKNIYKFEYIITDSELEALILECNLIKRYRPKYNVVLRDDKTYPYIKVTTNEDYPRIL 115 Query: 130 YAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALK 187 + V +A FG + N A L+ I+ + C + ++ R C + Sbjct: 116 KVRRVLKDKAK-YFGPYTNITAVNDTLELISSTYPIRSCKIDIDKAIKNKTRPCLNLHIN 174 Query: 188 RCAGACCGKESHEEHA 203 +C G C G S EE+ Sbjct: 175 KCLGPCTGNVSKEEYG 190 >UniRef50_A9NEZ8 Excinuclease ABC, subunit C n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEZ8_ACHLI Length = 577 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 93/175 (53%), Gaps = 10/175 (5%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA---MLRQSRRI 80 ++ L+ LPT PG Y+ +S + +Y+GK+ N+++RV S+ R A ++ + Sbjct: 1 MKEKLSILPTEPGCYMMLDQSGEV-IYVGKAKNLKNRVSSYFRGAHNAKTEKLISEISDF 59 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSRA 139 ++I T E +L+LE LIK+ PL+N RL ++ L++ NEK +V ++ ++ + Sbjct: 60 NYIVTNSEQESLILEYNLIKKYAPLYNIRLIDDKSYPYLEITNEKDPMLVVSRYIEVDKT 119 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 LFG + N ++A + L+ + Q+L Y L P+ + C + C G C Sbjct: 120 KTLFGPYPNSKSARETLKLL---QRL-YPLRRCNPVD-SKPCLYYHMGLCLGPCA 169 >UniRef50_D2RRA5 Excinuclease ABC, C subunit n=2 Tax=Halobacteriaceae RepID=D2RRA5_9EURY Length = 597 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 24/191 (12%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL--RTPDEAAMLRQSRR 79 + +R LP PGVY F E T LY+GK+V++RSRV S+ RT M+ ++ Sbjct: 4 DGVRERAKSLPREPGVYQFRAEGTT--LYVGKAVDLRSRVRSYADPRTARIRRMVDRADE 61 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK---RVDVVYAKEVD- 135 I T E ALLLEA LIK QP +N RL+ ++ +QL + R+++ + + Sbjct: 62 IEIAVTDTETQALLLEANLIKRHQPRYNVRLKDDKSYPMVQLTDHEAPRIEITRDPDGEA 121 Query: 136 ---------FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEP---LSRGRACFR 183 + P +FG F N+ ++T+ + YG+ G R R C Sbjct: 122 QGASSASGGAASGPTVFGPFTNK----GQVETVVKALRETYGVRGCSDHKYSGRDRPCLD 177 Query: 184 SALKRCAGACC 194 + C C Sbjct: 178 YEMGLCTAPCT 188 >UniRef50_D0MI24 DNA polymerase III, epsilon subunit n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MI24_RHOM4 Length = 565 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/168 (36%), Positives = 83/168 (49%), Gaps = 14/168 (8%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQSRRI 80 + L LP PGVYLF E + LY+GK+ N+++RV HL P M+ + R+I Sbjct: 205 TLLPRLPEAPGVYLFRDEHGRL-LYVGKARNLQARVRQHLTAVEAHPPRLRQMVSEIRQI 263 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNK--RLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 W TA E+ ALL E+RLIK+ QP +N+ R R R L L+E V+ V Sbjct: 264 EWHVTATELEALLEESRLIKQHQPRYNRLQRRYRTRPFLRLALHET-PPVLSLTPVLLDD 322 Query: 139 APNLFGLFANRRA---ALQALQTI--ADEQKLCYGLLGLEPLSRGRAC 181 +G RR AL+ALQ I Q L+G PL+ G C Sbjct: 323 GAEYYGPLPGRRQGRRALEALQEIFRLPRQNAHLVLMGRCPLAGGELC 370 >UniRef50_Q255T2 UvrABC system protein C n=17 Tax=Chlamydiaceae RepID=UVRC_CHLFF Length = 604 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 16/204 (7%) Query: 23 HLRSFLNDL-PTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQ 76 H++ F + P PGVYL S + LYIGK+ N+R+R+ ++ + ++ ++++ Sbjct: 2 HVKDFSPKIIPPSPGVYLMKDSSGEV-LYIGKAKNLRNRITTYFQKQGDSRERIPFLMKK 60 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK----RVDVVYAK 132 + I I + E ALLLE LIK+ P +N L+ ++ L ++ R+D + K Sbjct: 61 TTDIETILVSNETEALLLENNLIKKYHPKYNVLLKDDKTFFCLAISLSHPWPRIDAIRTK 120 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIAD--EQKLCYGLLGLEPLSRGRACFRSALKRCA 190 V S+ +FG + + A L+ I + C E +R R C +KRC Sbjct: 121 AVTSSKKQIVFGPYVSAEACQTLLEVIGQWFPLRTCS---NREFSTRKRPCILYEMKRCL 177 Query: 191 GACCGKESHEEHALRLRQSLERLR 214 C S EE+A L +++ L+ Sbjct: 178 APCVNFCSQEEYAETLEKAVLFLK 201 >UniRef50_C1SGC9 Excinuclease ABC, C subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGC9_9BACT Length = 599 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 117/246 (47%), Gaps = 37/246 (15%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQSR 78 + L ++P PG+YL+ G++ + LY+GK+ N+R+RV S+ + ML+ +R Sbjct: 2 FKPVLKEIPENPGIYLYLGKNGEI-LYVGKAKNLRNRVSSYFVDFESKPIRTRKMLQSAR 60 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK-----RVDVVYAKE 133 I ++ T E ALLLE +IK ++P +N RL+ ++ + + E+ R+ K+ Sbjct: 61 DIRFVVTTSEAEALLLENNVIKTEKPRYNVRLKDSKSYPFILITEEDYPKLRITRESGKK 120 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGL--LGLEPLSRGRACFRSALKRCAG 191 ++ FG F + + +L++I DE + L G G+ C + +++C G Sbjct: 121 GEY------FGPFVD----VGSLRSIVDELLKVFPLRSCGDSKFREGKLCLKFQIRKCLG 170 Query: 192 ACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSL 251 C S R Q +E++R ++G V + + H+ Q + L + Sbjct: 171 PCENMISKN----RYNQLVEQIREF---FRGNV-------DTVKSHMEQEMMRLSDDMNF 216 Query: 252 EEATTL 257 EEA + Sbjct: 217 EEAAIM 222 >UniRef50_Q2S2L6 Exonuclease family n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2L6_SALRD Length = 538 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 19/195 (9%) Query: 17 IYEYPEHLRSF----LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA 72 + E P H+ S L D+P PGVY+ S T PLYIGK+ + R+ SH + + Sbjct: 169 VREVPGHIESIRDEVLPDVPDEPGVYVMKNRSGT-PLYIGKAKRLPDRLRSHFTAVESSG 227 Query: 73 -----MLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRR--NRQLCALQLNEKR 125 ML++ R + W TA E+ A+LLE+R IK ++P +N+ RR NR L + Sbjct: 228 ARKRKMLQKVRSVDWTTTATELEAILLESRRIKAEKPRYNRAQRRYYNRPFIRLDTAHEY 287 Query: 126 VDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFR 183 V + + ++ A +G N A + + +L C E L G+ C Sbjct: 288 PTVSWTRRLEADGA-EYYGPVRNTEQAEMVVDVVGRFFQLRECDD----ERLHLGQRCLY 342 Query: 184 SALKRCAGACCGKES 198 + + RC C K++ Sbjct: 343 ADMDRCTVPCETKDA 357 >UniRef50_Q7NKN5 Excinuclease ABC subunit C n=1 Tax=Gloeobacter violaceus RepID=Q7NKN5_GLOVI Length = 370 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 95/197 (48%), Gaps = 18/197 (9%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRISW----- 82 L DLP PGVY F + D LYIGKSV++R+RV S+LR + RQ+ R+ + Sbjct: 12 LEDLPDAPGVYRFV-DCDGRLLYIGKSVHLRTRVRSYLRR--DGGHSRQTERLKFEAQAV 68 Query: 83 --ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRA 139 +CT E+ ALLLE RLI+E P FN+ +R RQ L+L+ ++ ++ V Sbjct: 69 EVLCTGSELAALLLEGRLIREYLPPFNQAQKRYRQYPFLRLSVQEDYPRLHLTRVLAGDG 128 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 +G ++ R + +AD L LGL A + L G C G Sbjct: 129 AEYYGPYSQAR----FVSWMAD---LLSASLGLRTCRDFSAIYHGCLLDQLGKCLGPCRT 181 Query: 200 EEHALRLRQSLERLRVV 216 + R+ +ERLR + Sbjct: 182 GALVAQYRERVERLRAL 198 >UniRef50_Q0B0A0 UvrABC system protein C n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=UVRC_SYNWW Length = 601 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 24/199 (12%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE-----AAMLRQ 76 E L+ L +P +PGVYLF + + LY+GK+ +R R+ S+ + P+ AM+ Sbjct: 4 EMLKERLKKVPLQPGVYLFKNQEGQV-LYVGKARVLRQRMRSYFQAPERMHPKVKAMMAW 62 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK----RVDVVYAK 132 +I T E+ AL+LE LIK +P +N LR ++ +++ RV + K Sbjct: 63 VSDFDFIVTHSEMEALILENNLIKSYKPRYNIDLRDDKSYPYIKVTVADKFPRVYLAREK 122 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEP----LSRGRACFRSALKR 188 + SR FG + + + ++ D KL G+ GL SR R C + + Sbjct: 123 KDGVSR---YFGPYTD-------VTSLRDTLKLLNGVFGLRSCRTMKSRRRPCLNRDMGK 172 Query: 189 CAGACCGKESHEEHALRLR 207 C C G+ S EE++ +++ Sbjct: 173 CLSPCSGEISEEEYSQKVQ 191 >UniRef50_Q1IZB2 UvrABC system protein C n=4 Tax=Deinococcus RepID=UVRC_DEIGD Length = 616 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 4/174 (2%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQ-SRRISWICTAGEI 89 LP PGVY+F P+YIGK+VN+RSRV H + ++ + + +I T E+ Sbjct: 9 LPASPGVYIF--RRGGTPIYIGKAVNLRSRVAQHFKAGGKSGKFTALADSLDFITTRNEV 66 Query: 90 GALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFANR 149 AL+LEA LIK+ +P +N L+ ++ L+L + ++ + +G + + Sbjct: 67 EALILEANLIKQHRPHYNVLLKDDKHYPFLKLTNEAFPMLVVTRRVLKDGASYYGPYPD- 125 Query: 150 RAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHA 203 +A++ ++ + D GL + R C + RC G C + +A Sbjct: 126 ASAVRRVKHLIDTMFPLRKNSGLPMQKKPRPCLNYHMGRCLGPCVDAADPQAYA 179 >UniRef50_Q3M542 UvrABC system protein C n=11 Tax=Cyanobacteria RepID=UVRC_ANAVT Length = 627 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLR 75 PE L + L+++P PGVY SD + +YIGKS +RSRV S+ R T A M + Sbjct: 14 PERLEARLSEIPPEPGVYFMRDGSDRI-IYIGKSRKLRSRVRSYFREGYNKTERIATMAK 72 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEKRVDVVYAKE 133 I +I T E AL LEA LIK+ QP FN L+ +++ + +E + ++ Sbjct: 73 LVTEIEFIVTDTEAEALALEANLIKQHQPYFNVLLKDDKKYPYVCITWSEDYPRIFITRK 132 Query: 134 VDFSRAPN-LFGLFANRRAALQALQTIADEQKLCYGLLGL-EPLSRGRACFRSALKRCAG 191 + + +G + + + L L+ I K + L +PL + R C L RC G Sbjct: 133 RQLGKEKDKYYGPYTD--SGL--LREILRISKRIFALRQRPQPLFKDRPCLNYDLGRCPG 188 Query: 192 ACCGKESHEEHALRLRQSLERLRVVCWPWQG 222 C S EE+ R++++++ +V +QG Sbjct: 189 VCQQLISPEEY----RKTVQKVAMV---FQG 212 >UniRef50_A9BGW2 UvrABC system protein C n=1 Tax=Petrotoga mobilis SJ95 RepID=UVRC_PETMO Length = 574 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 13/177 (7%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA------MLRQSR 78 RS LN++P +PGVY+F P+YIGK+ N+++RV S+ + ML ++ Sbjct: 4 RSILNNIPKKPGVYIFKNNKGD-PIYIGKAKNLKNRVSSYFNKKNYIGNEKTYEMLEKAT 62 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 + +I T+ E A +LEA LI +P +N L+ R + + +++ + Sbjct: 63 NLDYIITSNENQAFILEANLIYIHKPKYNIMLKDTRVYPYILVTDEQFPKIKYIRTKKEE 122 Query: 139 APNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGAC 193 +G +++ + ++ + K+ C LG + + CF L RC G C Sbjct: 123 KGKFYGPYSDVKFVKDVIEVLQSVYKIRSCDRDLG----RKSKPCFLYHLGRCYGPC 175 >UniRef50_A9B4F8 Excinuclease ABC, C subunit n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B4F8_HERA2 Length = 641 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 12/190 (6%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRI------- 80 L +LP PGVY++ +++T+ +Y+GKS ++R RV S+ P + ++RR+ Sbjct: 19 LRNLPLSPGVYIYRDQANTI-IYVGKSKSLRDRVRSYFGAP--RGLTSKTRRLVQNIADF 75 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 +I T E+ ALLLE LIK+ +P +N L+ ++ +++ ++ V Sbjct: 76 EFITTDTELEALLLEMNLIKKHRPRYNVLLKDDKSYPYIKITKEAWPRVLRVRKVIEDGG 135 Query: 141 NLFGLFANRRAALQALQTIAD--EQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG FA + ++ + +LC + + R RAC +KRC G C + Sbjct: 136 IYFGPFAKASSVYATIELLNKLFAFRLCNDDMFKKHERRNRACMYYDIKRCLGPCANNCT 195 Query: 199 HEEHALRLRQ 208 EE++ + Q Sbjct: 196 TEEYSTAINQ 205 >UniRef50_A0L8U4 Excinuclease ABC subunit C n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8U4_MAGSM Length = 617 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 12/183 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQ 76 + L+ + LP +PGVY F+ ++ + LY+GK+ +R RV S+ +P M++Q Sbjct: 13 QRLKRDVKQLPLKPGVYRFYDDAGQL-LYVGKAKALRKRVSSYFNHLAGHSPKTVVMVKQ 71 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 R+ + TA E AL+LEA LIK QP +N L+ N+ L L D Y + + Sbjct: 72 IMRLEFTTTANENDALVLEANLIKAHQPRYNVLLKDNKSYPYLHLT---TDHAYPRLALY 128 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS---RGRACFRSALKRCAGAC 193 G F + A++ + + + + E R R C + + RC G C Sbjct: 129 RGDRKARGRFFGPYPSAHAVRETLNWLQKIFPVRQCEDSQFNHRSRPCLQYQIHRCGGPC 188 Query: 194 CGK 196 C + Sbjct: 189 CDR 191 >UniRef50_D1Y7G8 Excinuclease ABC, C subunit n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y7G8_9BACT Length = 575 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 7/185 (3%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQSR 78 +R+ L LP +PGVYL H E+ + +Y+GK+ ++ RV S+ D A +++ + Sbjct: 10 IRAILRTLPLKPGVYLMHDETGKV-IYVGKAKKLKRRVSSYFNHRDFAIPRLRKLVQTVQ 68 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 IS+I T E A ++E+RLIK QP FN L+ + + + ++ V + Sbjct: 69 DISFIRTETESEAFIVESRLIKAIQPFFNVELKMGSRYPFIVVTAEKFPRVLVTHTR-PK 127 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 +FG + + A L I + + LE R C + +C G C GK + Sbjct: 128 TGRVFGPYTSAGAMRSMLNMIKNFFPARNCSMNLEKEKLARPCIMYDIGKCLGPCAGKCT 187 Query: 199 HEEHA 203 +E+ Sbjct: 188 EKEYG 192 >UniRef50_A0AGX5 Complete genome n=3 Tax=Listeria RepID=A0AGX5_LISW6 Length = 366 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 61/181 (33%), Positives = 91/181 (50%), Gaps = 25/181 (13%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPD---EAAMLRQSRRI 80 L++ L LP PG Y++ E++ + LYIGKS +++RV S+ + A ++RQ R + Sbjct: 5 LQTKLTLLPESPGCYIYKDENNEI-LYIGKSKCLKNRVKSYFHSKQIGKTARLVRQIRDL 63 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKR--VDVVYAKEVDFS 137 I T E ALLLE LI++ QP FN +L+ +++ NEK ++VV+ + D Sbjct: 64 ELIITTSEKEALLLEMILIQKYQPPFNIQLKEGTSYPYIKITNEKNPHIEVVFEAKQD-- 121 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR-----GRACFRSALKRCAGA 192 + FG + R +A Q + I QKL PL R GR C L C G Sbjct: 122 -GAHYFGPYPGRYSARQTVDLI---QKLF-------PLCRCDGKPGRPCLYYHLGLCLGP 170 Query: 193 C 193 C Sbjct: 171 C 171 >UniRef50_D1R706 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R706_9CHLA Length = 614 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 51/231 (22%) Query: 32 PTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQSRRISWICTA 86 P PGVYL + M LY+GK+ N+R+R+ + T + ++ Q I I Sbjct: 12 PNHPGVYLMKNRT-GMILYVGKAKNLRTRIRQYFMTSGDGREMIPFLVPQIESIETISVT 70 Query: 87 GEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK---------------RVDVVYA 131 E ALLLE+ LIK+ +P +N L+ ++ AL++N K + D VY Sbjct: 71 SEKEALLLESHLIKKHKPKYNALLKDDKSYVALKINVKNPWPMLSLERYRGKPKADGVY- 129 Query: 132 KEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS------RGRACFRSA 185 FG + + AA + L L + L L S R R C Sbjct: 130 -----------FGPYTHAGAARRTLD-------LLHRLFPLRQCSDAEFARRTRPCILYD 171 Query: 186 LKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQY 236 +KRC C K + EE+ +++ ++++ LR Q L+E + EM Y Sbjct: 172 MKRCIAPCVQKCTKEEYQIQVDRTIKFLR-----GQNKEILQEMYQEMETY 217 >UniRef50_B8FTB6 Excinuclease ABC C subunit domain protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FTB6_DESHD Length = 376 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 19/194 (9%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSR 78 L+ L DLP +PGVYL +S +Y+GK+ N+++RV + R P M+ + Sbjct: 7 LKEKLKDLPEQPGVYLMQ-DSLGNIIYVGKAKNLKNRVSQYFYKQKDRDPKVEEMILRIA 65 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK---RVDVVYAKEVD 135 + E+ ALL E RLIKE +P +N++++ +++ +++ ++ R+D+V +E Sbjct: 66 DWEYRIVDTELDALLEECRLIKEIKPHYNRQMKNHQKYVYIKIPDESFPRLDIVQERE-- 123 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR---GRACFRSALKRCAGA 192 + +G F++R A++ ++D + + R G C L C G Sbjct: 124 -AGGGIYYGPFSSRHRVETAVEGLSD----IFLIRKCSAPGRSKGGNGCLYRQLGTCVGV 178 Query: 193 CCGKESHEEHALRL 206 C GK S EE+ RL Sbjct: 179 CTGKVSSEEYRERL 192 >UniRef50_A1BED8 UvrABC system protein C n=12 Tax=cellular organisms RepID=UVRC_CHLPD Length = 631 Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 12/186 (6%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQSRRISWICT 85 LP+ PGVY F + +YIGK+ N+R+RV S+ R P + M+ + I I T Sbjct: 24 LPSSPGVYQFKNAQGRV-IYIGKAKNLRNRVRSYFRNPQQLFGKTLVMVGKIADIEVIIT 82 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSRAPNLFG 144 + E+ AL+LE LIKE +P +N L+ ++ L + NE ++ ++V FG Sbjct: 83 SSEVEALILENNLIKELKPRYNVNLKDDKTYPYLVITNEPFPRILVTRQVK-KDGSTWFG 141 Query: 145 LFANRRAALQALQTIAD--EQKLCYGLLGLEPLSRG--RACFRSALKRCAGACCGKESHE 200 + R L I + C L E +SRG + C + +C G C G + E Sbjct: 142 PYTEARQLRSILDFIGSIFPIRSCKLRLSPENISRGKFKVCLDYHIHKCKGPCEGLLTEE 201 Query: 201 EHALRL 206 E+ L + Sbjct: 202 EYLLMI 207 >UniRef50_C7H041 Excinuclease ABC subunit C n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H041_9FIRM Length = 626 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 19/198 (9%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSH----LRTPDEAAMLRQSRRISWI 83 + LP PGVYL H +S +Y+GK+ N++ RV S+ +++ A M+RQ +I Sbjct: 8 VKKLPEVPGVYL-HKDSTGKVIYVGKANNLKKRVQSYFSKTVKSRKVAYMVRQITEFEYI 66 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK----RVDVVYAKEVDFSRA 139 TA E AL+LE LIK+ P +N L ++ ++++E R+ E D ++ Sbjct: 67 VTANEKEALILECNLIKKYMPRYNVLLTDDKTYPYIKISEDEEYPRITKTRRIEKDGAK- 125 Query: 140 PNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRG-RACFRSALKRCAGACCGK 196 FG +++ AA + + + +L C L+ G RAC + +C G C GK Sbjct: 126 --YFGPYSDEFAANEIMDLLNKIYRLKKC----KLQKFPDGMRACLNYHIGQCDGMCIGK 179 Query: 197 ESHEEHALRLRQSLERLR 214 + E++ R+ ++ + L+ Sbjct: 180 GNREDYLDRIEKAKDFLQ 197 >UniRef50_C9R9D0 Excinuclease ABC, C subunit n=1 Tax=Ammonifex degensii KC4 RepID=C9R9D0_AMMDK Length = 622 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 10/178 (5%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSRRISWICT 85 LP PGVYLF E + +Y+GK+ ++R RV S+ + +P A+LR+ + ++ T Sbjct: 10 QSLPAEPGVYLFKDERGEV-IYVGKAASLRQRVKSYFQGNPSPKVEAILRRVANLEFMVT 68 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAPNLFG 144 E+ AL+LEA LIK +P +N L+ ++ +++ E+ V + FG Sbjct: 69 DNEVEALILEANLIKLHRPRYNVVLKDDKSYPYIKVTVEEEYPRVLFARRRDDKRARYFG 128 Query: 145 LFANRRAALQALQTIAD--EQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 + A + L+ + + C G + P R C +KRC G C G+ E Sbjct: 129 PYTKAGAVYETLRFLRTLFPYRSCSGPV---PRPNSRPCLNYHIKRCPGPCTGQVDPE 183 >UniRef50_A9KSS0 UvrABC system protein C n=59 Tax=Firmicutes RepID=UVRC_CLOPH Length = 628 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 28/203 (13%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQSRRISW 82 L LP +PGVY+ H D + +Y+GK++++++RV + ++ + M+ + Sbjct: 8 LKKLPAKPGVYIMHNNKDEI-IYVGKAISLKNRVRQYFQSSRNLSTKIQQMVSNIDHFEY 66 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEKRVDVVYAKEVDFSRAP 140 I E+ AL+LE LIKE +P +N L+ ++ + +NE V++A++ +A Sbjct: 67 IIVDSEMEALVLECNLIKEHRPKYNTMLKDDKSYPYIKVTVNEAYPRVLFARQQKKDKA- 125 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGL----------LGLEPLSRGRACFRSALKRCA 190 FG + +L A++ I D + Y + +GLE R C +K+C Sbjct: 126 KYFGPY----TSLGAVKDILDLLRRLYFIRTCNRNLPKDIGLE-----RPCLYYHIKQCK 176 Query: 191 GACCGKESHEEHALRLRQSLERL 213 C G S EE+ + + +E L Sbjct: 177 APCQGYISEEEYRKSIDEVIEFL 199 >UniRef50_A8SNK4 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SNK4_9FIRM Length = 620 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 16/196 (8%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE----AAMLRQSRRISWI 83 L LP PGVY+ + + D + +Y+GKSV++++RV S+ T + AM+ R +I Sbjct: 14 LKKLPDLPGVYIMYDKDDKI-IYVGKSVSLKNRVRSYFTTNHKYKKVQAMVEHIHRFEYI 72 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSRAPNL 142 E +L+LEA LIK+ +P +N L+ ++Q +++ NEK ++ +++ +A Sbjct: 73 IVNNETESLVLEANLIKKNRPKYNINLKDDKQYPYIKITNEKFPKILKVRDIKEDKAQ-Y 131 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLE-PLSRG----RACFRSALKRCAGACCGKE 197 FG F + L+ + + L Y + + +G R C L RC+ C Sbjct: 132 FGPF----PTISDLEKLMELSILIYNIRDCKLNFDKGKFLQRPCMSYYLGRCSAPCTQNI 187 Query: 198 SHEEHALRLRQSLERL 213 E + +++ ++ L Sbjct: 188 DRENYNNDVKRVIKFL 203 >UniRef50_A7VUD6 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VUD6_9CLOT Length = 628 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 15/201 (7%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQSR 78 LR+ LP PGVYL S+ + +YIGK+ +++RV + +P M+ Q Sbjct: 8 LRTRAMALPAAPGVYLMKNASNEI-IYIGKAKALKNRVSQYFGSPKNHPPKVRKMVSQVD 66 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 +I T E AL+LE LIK+ P +N L+ ++ +++ K ++ + + Sbjct: 67 HFDYILTDSEFEALVLECSLIKQHTPKYNILLKDDKGYHYIKVTPKPYRRIFEAKQKLND 126 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGL-----EPLSRGRACFRSALKRCAGAC 193 G + + + Q++ DE + + L + + RGR C +K+C C Sbjct: 127 GAEYIGPYTSSFSVKQSV----DEARKIFKLPTCSRKFPQEIGRGRPCLNYFIKQCCAPC 182 Query: 194 CGKESHEEHALRLRQSLERLR 214 GK S EE+ + ++LE L+ Sbjct: 183 RGKLSEEEYEGYVDEALEFLK 203 >UniRef50_A8GXA7 Excinuclease ABC subunit C n=2 Tax=Rickettsia bellii RepID=A8GXA7_RICB8 Length = 356 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 18/216 (8%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE---AAMLRQSRRI 80 ++ L +PT PG+YL + SD +YIGK+ N++ R+ + + A M+ Q + Sbjct: 6 IKKLLPLVPTLPGIYLMYN-SDKEIIYIGKAKNLKKRLNYYSKNNLRGRIARMVHQVYLV 64 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSRA 139 + T E A LLE +LIK+ QP FN LRR++ ++L ++ + +D S Sbjct: 65 EYKVTISESEAFLLETQLIKQHQPRFNILLRRDKSASYIKLRSDHDFPTLVKCYLDNSTG 124 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS------RGRACFRSALKRCAGAC 193 LFG F + Q I + QK + L S R R C + +C C Sbjct: 125 NKLFGPFT---SGHQIDLIITELQK----IFKLRTCSDSDFAFRKRPCLEYEIGKCFAPC 177 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQ 229 G S E++A + Q + L G +ALK Q Sbjct: 178 TGNISKEDYAELIEQINDFLSSNIEKLLGKLALKMQ 213 >UniRef50_O26541 UvrABC system protein C n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=UVRC_METTH Length = 579 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 20/180 (11%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSRRISWICTAG 87 LP GVY+F D + LY+GKS++IR RV S+ R P M+R I +I T Sbjct: 10 LPDATGVYIFRDRDDRV-LYVGKSISIRKRVSSYFREQENPRLRIMMRHLESIEYILTQN 68 Query: 88 EIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK---RVDVVYAKEVDFSRAPNLFG 144 E AL+LE+ LIK +P +N RL+ +++ +++ ++ RV +V D +R +G Sbjct: 69 EKEALILESNLIKRYRPPYNVRLKDDKRYPFIKITDEEYPRVLIVRTIGRDSAR---YYG 125 Query: 145 LFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 F + A + L+ I ++ C + G C S + C C G+ S E++ Sbjct: 126 PFTDTGAVRRTLKLIKSLFRIRSCRRMDG--------PCLNSQIDLCYAPCDGRISREDY 177 >UniRef50_C9M9X8 Excinuclease ABC, C subunit n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9X8_9BACT Length = 496 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 11/192 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRIS 81 E +R L LP RPGVYL H E + +Y+GK+ N++ RV S+ D A+ R + ++ Sbjct: 2 ERIRGLLKKLPNRPGVYLMHDERGKI-IYVGKAKNLKRRVSSYFNHKD-FAIPRLRKLVA 59 Query: 82 WIC------TAGEIGALLLEARLIKEQQPLFNKRLRR-NRQLCALQLNEKRVDVVYAKEV 134 +C TA + A ++E+RLIK QP FN L+ R A+ +E +V + Sbjct: 60 TVCDITTIRTASDAEAYIVESRLIKAYQPFFNVELKMGTRYPWAVVTDEPFPRLVVTRRR 119 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 D FG F + A L I L L R C + +C C Sbjct: 120 DIK--GRYFGPFISAGALKDVLHIIEKAFPLRSCKYDLTRTKLSRPCLDYGIGKCDAPCV 177 Query: 195 GKESHEEHALRL 206 G + E+ R+ Sbjct: 178 GLCTAREYGERV 189 >UniRef50_Q7V7L7 UvrABC system protein C n=43 Tax=Cyanobacteria RepID=UVRC_PROMM Length = 667 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 20/197 (10%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQSR 78 L L ++P PG YL D + LY+GKS +R+RV S+ R+ + M+RQ Sbjct: 34 LEQRLKEIPAEPGCYLMRDVEDRL-LYVGKSKCLRNRVRSYFRSSSDHGPRIRLMVRQIA 92 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ---LCALQLNEKRVDVVYAKEVD 135 I +I T E +L+LE+ LIK QQP FN L+ +++ LC E + + Sbjct: 93 EIEFIVTDSEAESLVLESNLIKNQQPHFNVLLKDDKKYPYLCITWSEEYPRIFITRRRRF 152 Query: 136 FSRAPNLFGLFAN----RRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAG 191 ++ +G + + RR L ++ Q+ PL + R C ++ RC G Sbjct: 153 RNKNDRFYGPYVDVGLLRRTLLLVKRSFPLRQR-------PRPLHQDRTCLNYSIGRCPG 205 Query: 192 ACCGKESHEEHALRLRQ 208 C K + +++ LR+ Sbjct: 206 VCQQKITPQDYHQVLRK 222 >UniRef50_Q313T1 UvrABC system protein C n=2 Tax=Desulfovibrio desulfuricans subsp. desulfuricans RepID=UVRC_DESDG Length = 700 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 22/177 (12%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRRISWICT 85 +PT PGVYL+ + + +Y+GK+ ++R RV S+ R TP AMLR + + + T Sbjct: 9 IPTTPGVYLYKDPAGKV-VYVGKAKHLRRRVASYFRDIQRHTPKTRAMLRSAATVETLST 67 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR--VDVVYAKEVDFSRAPNLF 143 E ALLLEA LIK+ +P +N LR ++Q QL K +V ++V F Sbjct: 68 TTEKEALLLEASLIKKHRPRYNILLRDDKQYVLFQLTRKHHWPRLVLTRKVR-KDGSAYF 126 Query: 144 GLFANRRAALQALQTIADEQKLCYGLLGLEPLS------RGRACFRSALKRCAGACC 194 G F + +AA Q + I + + L S R R C + +C G C Sbjct: 127 GPFTSGQAARQTWKVI-------HKVFPLRRCSDKAFRNRVRPCLYHFMNQCPGPCV 176 >UniRef50_Q1MQH2 UvrABC system protein C n=3 Tax=Desulfovibrionaceae RepID=UVRC_LAWIP Length = 621 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 26/195 (13%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRRISWI 83 + +PT PGVYL+ +S +Y+GK+ N+R RVLS+ R TP AM+ + + I Sbjct: 7 SSIPTTPGVYLYK-DSQGRIIYVGKARNLRKRVLSYFRDGLVITPKTKAMMNHANLLETI 65 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE----KRVDVVYAKEVDFSRA 139 T E ALLLEA LIK+ +P +N LR ++Q ++ + R+++V D + Sbjct: 66 STNTEKEALLLEASLIKKHRPRYNIVLRDDKQYLLFRIQKGIPFPRLEIVRQSYKDNAV- 124 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS------RGRACFRSALKRCAGAC 193 FG F + ++ D K + + L S R R C L++C C Sbjct: 125 --YFGPFTSG-------TSVRDTWKFIHKIFPLRRCSDKVFNNRIRPCLYFYLQQCLAPC 175 Query: 194 CGKESHEEHALRLRQ 208 + +++A+ +++ Sbjct: 176 TEEVDPKDYAVLIQK 190 >UniRef50_A6BHR5 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHR5_9FIRM Length = 617 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 12/184 (6%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQSRRISW 82 L LP +PGVYL H E D + +Y+GK++++++RV + ++ M+ R + Sbjct: 10 LKKLPGKPGVYLMHDEKDAI-IYVGKAISLKNRVRQYFQSSRNKGAKIEQMVTHISRFEY 68 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEKRVDVVYAKEVDFSRAP 140 I T E+ AL+LE LIKE +P +N L ++ + +NE V+ A+ + +A Sbjct: 69 IVTDSELEALVLECNLIKEHRPKYNTMLMDDKTYPFIKVTVNEPFPRVMMARRMKKDKA- 127 Query: 141 NLFGLFANRRAALQALQTIAD--EQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG + + A ++ I + C L + + + R C + +C C G S Sbjct: 128 KYFGPYTSTGAVKDTIELIRKLYHIRSCNRSLP-KDIGKERPCLNYHIHQCYAPCQGYIS 186 Query: 199 HEEH 202 EE+ Sbjct: 187 REEY 190 >UniRef50_B5YF86 UvrABC system protein C n=2 Tax=Dictyoglomus RepID=UVRC_DICT6 Length = 599 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 93/185 (50%), Gaps = 10/185 (5%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR--TPDEAAMLRQSRRIS 81 L+ + + P GVY+F+ S + +Y+GK+ N+R RVLS+ +P +L++++ I Sbjct: 10 LKQKVENFPESTGVYIFYDHSGKV-IYVGKAKNLRKRVLSYFNDDSPKSNYILKKAKNIE 68 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEKRVDVVYAK--EVDFS 137 + T E AL+LE+ LIK+ +P+ N +LR ++Q + L L E+ +V A+ E D + Sbjct: 69 FYITDTETEALILESVLIKKYRPIMNVQLRDDKQYPMLKLTLYEEYPRLVLARRFEDDGA 128 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 R + R + ++ I + + + L +P R C + C C Sbjct: 129 RYYGPYTQSGTVRETISMVKKIFNLRSCNWNLPKSKP---KRPCLNYFIGNCKAPCQNYI 185 Query: 198 SHEEH 202 + EE+ Sbjct: 186 TKEEY 190 >UniRef50_Q83NI9 UvrABC system protein C n=2 Tax=Tropheryma whipplei RepID=UVRC_TROW8 Length = 607 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 21/191 (10%) Query: 30 DLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQSRRISWICT 85 ++P +PGVY F E+ + LY+GK+ N+R+R+ S+ R + ML S+++ W C Sbjct: 8 EIPCKPGVYRFEDENGRI-LYVGKAKNLRNRLGSYFTNARRGRRISYMLSISKKVGWTCV 66 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEK-------RVDVVYAKEVDF 136 A +I AL LE IKE P N +L+ ++ A+ + E+ R + YA F Sbjct: 67 ADDIEALRLEYSWIKEFAPPCNVKLKDDKAYPFLAVTIGEQVPRLLITRRKIQYA--THF 124 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 P +F L R + L I + + C ++ G CF + +C G C K Sbjct: 125 GPYPKVFHL----RETVSLLHKIF-QIRTCSPTNYKRAIASGMPCFEGQINKCFGPCSLK 179 Query: 197 ESHEEHALRLR 207 +H ++ R++ Sbjct: 180 TTHLQYQKRIK 190 >UniRef50_Q12W02 UvrABC system protein C n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=UVRC_METBU Length = 604 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 54/228 (23%), Positives = 108/228 (47%), Gaps = 19/228 (8%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQSR 78 +R ++++P PGVYL SD + +YIGK+ +++ RV + ++ AM+R+ Sbjct: 1 MRPDISNIPELPGVYLMKDISDNI-IYIGKAKSLKKRVSQYFQSSKNHSSKTRAMVRKIA 59 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS 137 + +I T E+ AL+LEA L+K+ +P +N L+ +++ +++ + ++ Sbjct: 60 DVDYIVTESEVAALILEANLVKKNRPHYNIDLKDDKRYPYVKVTVNTKFPKIFITRRRLM 119 Query: 138 RAPNLFGLFANRRAALQALQTIAD--EQKLCYGLLGLEPLSRG-RACFRSALKRCAGACC 194 FG + N + Q L I+ K C + +G RAC + RC C Sbjct: 120 DGALYFGPYTNVKPVRQTLDMISQIFRIKRCNRRVD----GKGKRACLNYHIDRCYAPCN 175 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNW 242 G + EE+ + ++++ + + + +KE +M + I Q + Sbjct: 176 GSITPEEYRNNVMEAVK-----LFKGETSGTIKELQEKMNIHAIAQEY 218 >UniRef50_B2RM62 UvrABC system protein C n=4 Tax=Bacteroidetes RepID=UVRC_PORG3 Length = 600 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 9/201 (4%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLRQS 77 + L L LP +PG Y + E D +Y+GK+ N+R RV S+ ++RQ Sbjct: 5 DELNIILPTLPEKPGCYQYFDE-DGKVIYVGKAKNLRRRVSSYFYKEHADRKTRILVRQI 63 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 R I +I E ALLLE LIKE QP +N L+ + ++ + + ++A Sbjct: 64 RSIKYIVVDSEGDALLLENSLIKEYQPRYNVLLKDGKTYPSIVIKREPFPRIFATRDIKK 123 Query: 138 RAPNLFGLFANRRAALQALQTIAD--EQKLCYGLLGLEPLSRG--RACFRSALKRCAGAC 193 FG + A L+ + + + C L E + +G R C + +K+C G C Sbjct: 124 DGSEYFGPYPGALIAKGMLRLVKEIYPIRTCKLDLREEKIRQGRYRVCLQYHIKKCKGPC 183 Query: 194 CGKESHEEHALRLRQSLERLR 214 G ++ E+ + + + LR Sbjct: 184 IGNQTSNEYESNVSEIRDLLR 204 >UniRef50_UPI0001C41B0D excinuclease ABC C subunit UvrC n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41B0D Length = 615 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 25/215 (11%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSH----LRTPDEAAMLRQSRRISWIC 84 ++LP +PG+Y+ ++ + +Y+GKS ++R+RV S+ L +P ++ + +I Sbjct: 9 DELPQKPGIYIMKDINEEI-IYVGKSKSLRNRVKSYFQKNLDSPKTKVLMSHFNSLEYIV 67 Query: 85 TAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSRAPNLF 143 T E AL+LEA LIK+ +P +N RL+ +++ +++ +E +V + + S+ + Sbjct: 68 TNTEKEALILEANLIKKHRPRYNIRLKDDKRYPYVKITDEDFPKIVITRTI--SKTGTYY 125 Query: 144 GLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA-CFRSALKRCAGACCGKESHEEH 202 G F + A Q + K L + R C S + C C G+ S EE+ Sbjct: 126 GPFTDVTAVRQTV-------KFLKQLFRIRTCKRMDGPCLNSQIDLCYAPCDGQISKEEY 178 Query: 203 ALRLRQSLERLRVVCWPWQGAV--ALKEQHPEMTQ 235 E ++ + +QG +K+ EM Q Sbjct: 179 K-------EHIKKIDLFFQGKYNKIIKDLEIEMKQ 206 >UniRef50_C4LI21 Putative uncharacterized protein n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LI21_CORK4 Length = 616 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 6/162 (3%) Query: 13 EAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE-- 70 +A +I P R + ++P+ PGVY+F S PLYIG +VN+R R+ ++ D+ Sbjct: 230 DATSISPSPNRYRRLIENVPSSPGVYIFRSHSGE-PLYIGTAVNLRRRLRQYINGNDKRR 288 Query: 71 --AAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV-D 127 +L Q+R I I A A + EA LI + +P FN+R + RQ + R D Sbjct: 289 LIPHLLPQTRNIDTIECAHGFEAEVREATLIAKFRPPFNRRSKEPRQYWWISGARPRAHD 348 Query: 128 VVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGL 169 V A R+PN G F R+ A A + + GL Sbjct: 349 VSRATISRDPRSPNALGPFRTRQKATTAARLLGIGAPTASGL 390 >UniRef50_D1VLC1 DNA polymerase III, epsilon subunit n=1 Tax=Frankia sp. EuI1c RepID=D1VLC1_9ACTO Length = 615 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 15/188 (7%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE----AAMLRQSRRI 80 R +DLPT PGVY+F + + LY+GKS ++R+RV ++ + A M+ + R+ Sbjct: 243 RVLADDLPTGPGVYIFRDATGRV-LYVGKSASVRARVRTYFTASETRSRMAEMVAAAERV 301 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK---RVDVVYAKEVDFS 137 I A + A + E RLI E +P +N+R R ++ L+L ++ R+ V D Sbjct: 302 DAIACAHALEAEVRELRLIAEHKPPYNRRSRFPERVVFLRLTDEPFPRLSKVRQVRAD-- 359 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGACCG 195 A G F A A + D L C G L P AC + L +C C G Sbjct: 360 -AGTYLGPFGGVGGAELAGDGLLDAVALRRCGGR--LSPRVTSPACALADLGKCGAPCDG 416 Query: 196 KESHEEHA 203 ++S E + Sbjct: 417 RQSVESYG 424 >UniRef50_Q1AUH1 UvrABC system protein C n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=UVRC_RUBXD Length = 611 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 59/190 (31%), Positives = 86/190 (45%), Gaps = 9/190 (4%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLR 75 PE+ + LP PGVY+F + + LY+GK+ NIRSRV S+ P A + Sbjct: 2 PENSYPDRSHLPASPGVYIFR-DGEGRVLYVGKARNIRSRVASYFTRSGDGRPKIAELRE 60 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEV 134 + R+I +I GE AL+LEA LIK +P FN LR ++ + + V+A Sbjct: 61 RVRQIDFIAARGETEALVLEANLIKRHRPRFNASLRDDKSYPYIVVTTGDEYPRVFATRG 120 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR-GRACFRSALKRCAGAC 193 FG F + ++ A + ++ G EP R G C + R A C Sbjct: 121 PHDPRHRYFGPFPS-AGSVHATLDVLNKTFRFRKCRGPEPGRRSGIPCLNYHIGRSAAPC 179 Query: 194 CGKESHEEHA 203 G S EE+ Sbjct: 180 IGAVSKEEYG 189 >UniRef50_A5WBX3 UvrABC system protein C n=3 Tax=Psychrobacter RepID=UVRC_PSYWF Length = 614 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 12/199 (6%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSH----LRTPDEAAMLRQSRR 79 L+ + LP PGVY G++ + LY+GK+ +++SRV S+ + P A++ + Sbjct: 17 LKHLIKRLPNLPGVYKMLGKNGDI-LYVGKAKSLKSRVNSYFAKTIDHPKTRALVSRIHD 75 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEKRVDVVYAKEVDFS 137 I I T E ALLLE LIKE +P +N LR ++ + ++ + Y + Sbjct: 76 IETIITRSETEALLLEQNLIKEHRPPYNVLLRDDKSYLYVFISADQPYPRLAYGRGKAKH 135 Query: 138 RAPNLFGLFANRRAALQALQTIAD--EQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 + FG F + AA + L + + + C + R R C +KRC C G Sbjct: 136 QKGKFFGPFPSAHAAKETLVLMQKMFQMRQCTNTFFRQ---RKRPCLEYQIKRCRAPCVG 192 Query: 196 KESHEEHALRLRQSLERLR 214 S EE+A ++ ++ L+ Sbjct: 193 LVSAEEYAADVQNTIRFLK 211 >UniRef50_B8DGB7 UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C) n=18 Tax=Listeria RepID=B8DGB7_LISMH Length = 366 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 25/183 (13%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPD---EAAMLRQSR 78 + L+ L LP PG Y++ E++ + LYIGKS +++RV S+ + A ++RQ R Sbjct: 3 DKLQKKLTLLPESPGCYIYRDENNEI-LYIGKSKCLKNRVKSYFHSKQIGKTARLVRQIR 61 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKR--VDVVYAKEVD 135 + I T E ALLLE LI++ QP FN +L+ +++ NEK ++VV+ + D Sbjct: 62 DLELIITTSEKEALLLEMILIQKYQPPFNIQLKEGTSYPYIKITNEKNPHIEVVFEVKRD 121 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR-----GRACFRSALKRCA 190 + FG + R +A Q + I L PL R GR C L C Sbjct: 122 ---GAHYFGPYPGRFSARQTVDLIEK----------LFPLCRCDGKPGRPCLYYHLGLCL 168 Query: 191 GAC 193 G C Sbjct: 169 GPC 171 >UniRef50_Q5X1P5 UvrABC system protein C n=7 Tax=Gammaproteobacteria RepID=UVRC_LEGPA Length = 618 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 16/209 (7%) Query: 27 FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA----AMLRQSRRISW 82 FL LP+ PG+Y E T+ LY+GK+ N++ RV S+ + A++ Q + I Sbjct: 13 FLTKLPSEPGIYRMLDEEGTV-LYVGKAANLKKRVNSYFSKQNTGVKTRALVSQIKSIEI 71 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK----RVDVVYAKEVDFSR 138 T E ALLLE+ LIK +P +N LR ++ + L+ R+++ +K+ S Sbjct: 72 SVTRSETEALLLESNLIKALRPKYNVLLRDDKSYPYIHLSNHPDFPRIELYRSKKKPPS- 130 Query: 139 APNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 N FG + A + + TI K+ C +R R C + +KRC C Sbjct: 131 -GNFFGPYPGVAAVRETIVTIQKIFKIRNCRDSYF---KARSRPCLQYQIKRCTAPCVHY 186 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVA 225 S E + L + ++ L+ C A+A Sbjct: 187 ISPENYKLSVEDAIRFLQGKCQIILDALA 215 >UniRef50_B5EPN1 Excinuclease ABC, C subunit n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EPN1_ACIF5 Length = 623 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 13/185 (7%) Query: 27 FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISW 82 FL L ++PG+Y G+ + LY+GK+ N+R RV S+ + TP AML Q R+ Sbjct: 25 FLRTLTSQPGIYQMFGQGSRL-LYVGKARNLRRRVSSYFQKQRHTPKTLAMLAQVTRVEV 83 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP-N 141 + T E AL+LEA LIK P +N LR ++ L + + + + Sbjct: 84 VVTHTETEALVLEANLIKRHHPPYNILLRDDKSYPYLFIETGHGTPRMSLHRGAQKGKGH 143 Query: 142 LFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS---RGRACFRSALKRCAGACCGKES 198 FG + A+ AL+ + + L E + R RAC + ++RC+G C G S Sbjct: 144 YFGPY----PAVTALRESMVLLQKAFRLRTCEDHTFHHRSRACLQFQIRRCSGPCVGHIS 199 Query: 199 HEEHA 203 E++A Sbjct: 200 GEDYA 204 >UniRef50_B8CYK1 Excinuclease ABC, C subunit n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYK1_HALOH Length = 607 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 7/174 (4%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISWI 83 L LP RPGVYL E+ + +Y+GK+ ++R RV S+ R T M++ +I Sbjct: 8 LKRLPDRPGVYLMKDETGEV-IYVGKAKSLRRRVRSYFRKGNHTFKTKIMVKHIADFDYI 66 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAPNL 142 T E+ A +LEA LIK+ P FN RL+ ++ +++ ++ ++ + + Sbjct: 67 VTDTEVEAFILEANLIKKYNPKFNIRLKDDKTYPYIKVTVQEDFPRIFKTRLVKNDGNRY 126 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEP-LSRGRACFRSALKRCAGACCG 195 FG F + A + + + D L LE R C + +C G C G Sbjct: 127 FGPFTDVNAIYKTIDVLKDLFSLRTCKKNLEAGKPEKRPCLNYHIGKCVGPCIG 180 >UniRef50_A0M672 UvrABC system protein C n=7 Tax=Bacteroidetes RepID=UVRC_GRAFK Length = 597 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 20/206 (9%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA----AMLRQSRRISWI 83 L LP PGVY + ++ + LY+GK+ N++ RV S+ ++ M+++ I I Sbjct: 10 LKTLPNSPGVYQYFDKNGKI-LYVGKAKNLKKRVTSYFNKNHDSHRIGVMVKKICEIKHI 68 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLF 143 A E ALLLE LIK+ QP FN L+ ++ + + +R V+ + Sbjct: 69 VVASETDALLLENNLIKKHQPRFNVMLKDDKTYPWICIKNERFPRVFPTRRLIKDGSEYY 128 Query: 144 GLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRG--RACFRSALKRCAGACCGKESH 199 G F + + L I KL C L + + G + C L C G C G + Sbjct: 129 GPFTSFKTVNTLLDLIKGLYKLRTCNYDLAEDKIRNGKYKVCLEYHLGNCLGPCEGFQPE 188 Query: 200 EEH-----ALR------LRQSLERLR 214 EE+ A+R + SL+R R Sbjct: 189 EEYNNNIEAIRQIVKGNFKDSLQRFR 214 >UniRef50_A9DMS8 DNA polymerase III, epsilon subunit n=1 Tax=Kordia algicida OT-1 RepID=A9DMS8_9FLAO Length = 457 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 8/229 (3%) Query: 21 PEHLRS-FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL--RTPDEAAMLRQS 77 P HL S +DLP +PG+Y F + + +Y+GK+ NI+ RVL H ++ E + R++ Sbjct: 186 PPHLPSKIFDDLPAKPGIYYFKDKKGKI-IYVGKAKNIQKRVLGHFYNKSKKELDLCRET 244 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 I + + E+ ALL+E IK P +N +R + A+ R V + D Sbjct: 245 ADIDYELSGSELIALLMEDAAIKHHYPRYNVASKRTPKRFAIFEYADRRGVRHLAINDAK 304 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 + +F N R L+ + + LC L+ + C ++ C G C +E Sbjct: 305 IIQDPLIVFYNIRDCRTYLERLCMQFDLCPKYCHLQ--ENVKECSHFMIQSCQGICKSEE 362 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLG 246 + E + R++Q++ + + K ++ + +++N L+LG Sbjct: 363 AIETYNERVQQAIAHSKE--SSQNVVIKQKGRNTNEEAFVMVKNGLYLG 409 >UniRef50_B3E0M3 Excinuclease ABC subunit C n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E0M3_METI4 Length = 486 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 38/259 (14%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRISWI 83 L+ + DLP +PGVYLF + + +Y+GK+V++ RV + + LR R+++ + Sbjct: 5 LQEKIRDLPHKPGVYLFKDRFNRV-IYVGKAVDLHKRVSQYFHP---SRRLRADRKLNAL 60 Query: 84 CTAG----------EIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNE--KRVDVV 129 A E A+LLE RLIKE +P +N R +++ L + L+E R V Sbjct: 61 VEAAVDLEYYVVHSEAEAVLLEGRLIKEFRPRYNVSFRDDKRFLLVKVDLSEPFPRFQVT 120 Query: 130 YAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGL---LGLEPLSRG-RACFRSA 185 K+ D +R FG FA+ AL+T + K +GL L P + + C Sbjct: 121 RLKKQDNAR---YFGPFASS----SALRTTLNLMKKKFGLRSCSALIPSEKDYKHCLDHI 173 Query: 186 LKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVA--LKEQHPEMTQYHIIQNWL 243 +K C+ C K S E+ LER+++ C +G + E +M + Q++ Sbjct: 174 IKNCSAPCIAKISQAEY-------LERVKMACAFLEGKSKEMIDEIRLKMEEAAQAQDFE 226 Query: 244 WLGAVNSLEEATTLIRTPA 262 + +L EA PA Sbjct: 227 KAAELRNLLEALEETTRPA 245 >UniRef50_C9RQJ8 Excinuclease ABC, C subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQJ8_FIBSS Length = 623 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 94/200 (47%), Gaps = 18/200 (9%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA------MLR 75 EH+ L +LP PGVY+ + +YIGK+ +++RV S+ D A ML Sbjct: 6 EHIERRLAELPLLPGVYIMKNAQGKI-IYIGKAKVLKNRVSSYFDGSDHAGHRAATLMLP 64 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQL--CALQLNEKRVDVVYAKE 133 R I WI T E AL+LEA LI++ P +N L+ ++ A +NE + ++ Sbjct: 65 YIRDIEWIITESETEALILEANLIRKHTPKYNVLLKDDKHFPYLAFSVNEPFPRLFLSRS 124 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIAD---EQKLCYGLLGLEPLSRG-RACFRSALKRC 189 V +G + + R Q LQ IA + + C L PL+R R C + RC Sbjct: 125 VK-KDGCLYYGPYMSSRMIRQ-LQDIAARLFQIRECKLKL---PLNRPVRPCLNYHIGRC 179 Query: 190 AGACCGKESHEEHALRLRQS 209 C G + EE+ ++ Q+ Sbjct: 180 GAPCAGLVTREEYQKKVAQT 199 >UniRef50_Q2NGT2 UvrABC system protein C n=4 Tax=Methanobacteriaceae RepID=UVRC_METST Length = 598 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 89/188 (47%), Gaps = 17/188 (9%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE------AAMLRQSRRISW 82 +++P +PGVY+ H + D + +Y+GK+ ++SR+ S+ R D+ ++R + Sbjct: 7 DEVPQKPGVYIMHNKEDEV-IYVGKAKKLKSRLQSYFRDEDKLDRPKTQFLMRHFSYFEY 65 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNL 142 I T E AL+LEA LIK+ +P +N L+ +Q +++ + +Y + + Sbjct: 66 ILTNTEKEALILEANLIKKYRPHYNISLKDGKQYPYIKITNEDFPRIYITRNIVNDKASY 125 Query: 143 FGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 +G + + A + + ++ C + G C +K+C+ C S E Sbjct: 126 YGPYTDSTHARAFIDFLNKNFQIRTCKHMDG--------PCLNYQIKQCSAPCVNYISQE 177 Query: 201 EHALRLRQ 208 E+ +R+ Sbjct: 178 EYNRNIRR 185 >UniRef50_A4BWD8 DNA polymerase III, epsilon subunit n=3 Tax=Flavobacteriales RepID=A4BWD8_9FLAO Length = 462 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 5/185 (2%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL--RTPDEAAMLRQSRRISWICT 85 +++LP GVY F + + +Y+GK+ NI+ RV+SH + E M ++ +S+ T Sbjct: 192 IDNLPETFGVYYFKNLAKEI-IYVGKANNIKQRVISHFYDKKKKEQTMCLETADVSFTKT 250 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGL 145 E+ ALLLE+ IK P FN+ R++ + L E + +++ APN Sbjct: 251 GSELLALLLESSEIKHIYPKFNRAQRKSAEAVGLFSYEDQKGILHLAYNRLKLAPNALLK 310 Query: 146 FANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALR 205 + + L+T+ + +LC L+ + +CF LK C G CC KE+ E + R Sbjct: 311 YYSISECRNHLETLCETFELCPKYCHLQ--TNVSSCFHYQLKECKGVCCDKETVESYNKR 368 Query: 206 LRQSL 210 +++++ Sbjct: 369 VKEAI 373 >UniRef50_C7MCN8 Excinuclease ABC subunit C n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MCN8_BRAFD Length = 650 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 13/192 (6%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRR- 79 P R +PTRPGVY F E + +Y+GK+ N+R R++++ + D + + ++RR Sbjct: 4 PATYRPATGTIPTRPGVYRFRDEHGRV-IYVGKAKNLRQRLVNYFQ--DLSVLHERTRRM 60 Query: 80 ------ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAK 132 + W E+ AL LE IKE P FN + R ++ L L ++V V+ Sbjct: 61 VTTAASVEWTVVGTEVEALTLEYTWIKEFDPRFNVKFRDDKSYPYLVLTMGEKVPRVHIT 120 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTI--ADEQKLCYGLLGLEPLSRGRACFRSALKRCA 190 ++ FG + A + L + + C + GR C + +CA Sbjct: 121 RRPRAKGDRTFGPYPQVGAIRETLDLMLRVFPIRSCTAGVYRRAERSGRPCLLGFIGKCA 180 Query: 191 GACCGKESHEEH 202 C G S EEH Sbjct: 181 APCVGDISEEEH 192 >UniRef50_A9WT69 UvrABC system protein C n=2 Tax=Actinobacteria (class) RepID=UVRC_RENSM Length = 655 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 55/191 (28%), Positives = 82/191 (42%), Gaps = 12/191 (6%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLR 75 P R ++PT PGVY F E + +Y+GK+ N+RSR+ S+ P AM+ Sbjct: 4 PASYRPKTGEIPTDPGVYRFRDEHGRV-IYVGKAKNLRSRLTSYFANPVTLLPKTFAMVH 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEK--RVDVVYA 131 + + W E+ AL LE IKE P +N R ++ A+ + E+ RV V+ Sbjct: 63 TATSVQWTIVGSELEALQLEYTWIKEFAPRYNLAFRDDKSYPYLAVTMGEEFPRVQVMRG 122 Query: 132 KEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAG 191 + +R F A R L+ + C GR C + +CA Sbjct: 123 ERRKGTRYFGPFTAGAIRETVDTLLRVFP--VRTCSPSTFKRAQQSGRPCLLGYIDKCAV 180 Query: 192 ACCGKESHEEH 202 C G+ S EEH Sbjct: 181 PCVGRVSAEEH 191 >UniRef50_C5RNQ3 Excinuclease ABC C subunit domain protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RNQ3_CLOCL Length = 364 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 12/187 (6%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQS 77 +L+ + LP+ PGVYL + + +YIGKS N+++RV S+ + + +++ Sbjct: 2 NLKEKIKGLPSVPGVYLMKDSLENI-IYIGKSKNLKNRVSSYFQNSKNHSSKVIRLVQNL 60 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ--LNEKRVDVVYAKEVD 135 + +I T E A +LE +LIKE +P +N+ ++ +Q L + +D+ E Sbjct: 61 KDFDYIITDTEFEAFILECKLIKEIKPPYNRLMKSPMSYSYIQVALGDNCLDISLKSEAV 120 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 FG + +R + + I + K+ +G AC +LK C G C Sbjct: 121 KDDNCIYFGPYTSRNIVERGILGIKNHLKIA----CTNNSRKGSACINYSLKLCMGMCMN 176 Query: 196 KESHEEH 202 K S ++ Sbjct: 177 KVSQNQY 183 >UniRef50_A6M201 Excinuclease ABC, C subunit domain protein n=5 Tax=Clostridium RepID=A6M201_CLOB8 Length = 366 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 12/186 (6%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSR 78 L+ + LP+ PGVYL + + +Y+GKS N++SRV S+ +P +++ + Sbjct: 5 LKEKVKKLPSSPGVYLMKDSLNNV-IYVGKSKNLKSRVGSYFINSKSHSPKILKLVQNLK 63 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ--LNEKRVDVVYAKEVDF 136 + T E A LLE LIK+ +P +N+ ++ + ++ LNEK ++ + E + Sbjct: 64 DFEYKITDTEFEAFLLECELIKKIKPAYNRLMKNPKSYSYIKIVLNEKYPNIEISHESNE 123 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 + FG ++ + A + L I + K+ + + +CF +L C G C Sbjct: 124 TDGNIYFGPYSRKNIAEKGLYGIKEYCKIQCSI----NQRKTSSCFNYSLGLCIGMCLDT 179 Query: 197 ESHEEH 202 EE+ Sbjct: 180 TPREEY 185 >UniRef50_Q3AFE5 UvrABC system protein C n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=UVRC_CARHZ Length = 607 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 13/183 (7%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQSRRISW 82 + +LP PGVYL+ E + +Y+GK+ N+++RV S+ + P++ M+ ++R I Sbjct: 7 VKNLPDSPGVYLYKDEKGEV-IYVGKAKNLKNRVRSYFQPPEKLLPKTRVMMEKARDIEV 65 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNL 142 I T+ E+ AL+LE LIK +P +N L+ ++ L++ + + + Sbjct: 66 IITSTEVEALILEQNLIKRYRPRYNILLKDDKSYPYLKITGEEFPRLLITRRVVNDGGRY 125 Query: 143 FGLFANRRA---ALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 FG + + A + L++I + + + R C +K+C+ C G+ S Sbjct: 126 FGPYPDAGALNETYKLLRSIFKFRTCTPTIFA----QKKRPCLNFHIKKCSAPCAGEISR 181 Query: 200 EEH 202 EE+ Sbjct: 182 EEY 184 >UniRef50_Q5LIY7 UvrABC system protein C n=26 Tax=Bacteroidetes RepID=UVRC_BACFN Length = 608 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 9/189 (4%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLR----QS 77 E+L+ +++LP +PG+Y + T+ +Y+GK+ N++ RV S+ + R + Sbjct: 11 EYLKGIVSNLPEKPGIYQYLNAEGTI-IYVGKAKNLKRRVYSYFSKEHQPGKTRVLVSKI 69 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 I +I E ALLLE LIK+ +P +N L+ ++ ++ + + V+ Sbjct: 70 ADIRYIVVNSEEDALLLENNLIKKYKPRYNVLLKDDKTYPSICVQNEYFPRVFKTRRIIR 129 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEP----LSRGRACFRSALKRCAGAC 193 + +G +++ + L I L L L P + C +K CAG C Sbjct: 130 NGSSYYGPYSHSPSMHAVLDLIKHLYPLRTCNLNLSPENIRAGKFNVCLEYHIKNCAGPC 189 Query: 194 CGKESHEEH 202 G +S EE+ Sbjct: 190 IGLQSQEEY 198 >UniRef50_B1CBT5 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBT5_9FIRM Length = 622 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 8/183 (4%) Query: 20 YPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAML 74 Y ++L + + LP GVYL E+ T+ +Y+GK+ +++RV + R TP M+ Sbjct: 5 YSKNLNNKIKLLPENSGVYLMKDENGTI-IYVGKAKVLKNRVTQYFRKNSNHTPKVLKMV 63 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK-RVDVVYAKE 133 +I T E+ AL+LE LIK+ +P +N +R ++ +++ K ++ Sbjct: 64 ENIADFEYIITNNEMEALILECNLIKKYRPYYNILMRDDKTYPYIKITIKDEYPKLFVTR 123 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEP-LSRGRACFRSALKRCAGA 192 + FG +AN A +A+ TI + + L+ + +G C + +C G Sbjct: 124 KYINDGNKYFGPYANATYAKKAVSTINELYPIAMCKKELKSGVKKGNVCLNYHIGQCLGV 183 Query: 193 CCG 195 C G Sbjct: 184 CQG 186 >UniRef50_Q1Q607 Similar to uvrABC system protein C (UvrC exinuclease) n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q607_9BACT Length = 610 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 14/177 (7%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR--TPDE---AAMLRQSRRISW 82 L ++P PGVYL + +Y+GK+ N+++RV S+ + T D +++ I + Sbjct: 7 LKNVPVSPGVYLMKDAKHKV-IYVGKAKNLKNRVRSYFQKGTGDRLYTEYLIKHVVDIDF 65 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEV--DFSRAP 140 + T E AL+LE IK+ +P FN LR ++ ++L E D Y K V Sbjct: 66 VLTETEKEALILENNFIKQFKPKFNINLRDDKNFLCIKL-ETNKDFPYPKVVRQKEDDGA 124 Query: 141 NLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGACCG 195 FG +A+ RA + L+ I D + C SR + C + +C G CCG Sbjct: 125 MYFGPYASARAVRETLRYINDTIPVRKCRDNAF---KSRTKPCLYYQIHKCLGPCCG 178 >UniRef50_D1CFI6 Excinuclease ABC, C subunit n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFI6_THET1 Length = 613 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 12/189 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT---PDEA-AMLRQS 77 E + + L +P +PGVYL + + +Y+GK+ +R+RV S+ + P++ M+ Q Sbjct: 8 EEIITRLQAIPEKPGVYLMKDKHGKV-IYVGKAKVLRNRVRSYFSSKHLPEKIREMVPQI 66 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQL--CALQLNEKRVDVVYAKEVD 135 I +I T E AL LE LIK P +N + +++L + + E+ V+ +++ Sbjct: 67 HDIDYIVTDSEHEALTLEVTLIKHHMPKYNSMFKDDKRLPYIKVTVQEEFPRVLKCRQI- 125 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS--RGRACFRSALKRCAGAC 193 + +G + +A +A++ I LC+ EP+ + R C L RC GAC Sbjct: 126 INDGSKYYGPYTALGSAAEAIKLIHQHFMLCHK--ENEPIDGKQSRPCLPYYLHRCLGAC 183 Query: 194 CGKESHEEH 202 G+ +E+ Sbjct: 184 AGRADPQEY 192 >UniRef50_C6NXT8 Excinuclease ABC subunit C n=2 Tax=Gammaproteobacteria RepID=C6NXT8_9GAMM Length = 624 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 13/202 (6%) Query: 17 IYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAA 72 I + P L+ FL L ++PGVY +D LY+GK+ N++ RV S+ + +P A Sbjct: 14 IQDEPFDLKLFLRSLGSQPGVYQMLA-ADGHILYVGKARNLKRRVSSYFQKTRHSPKTLA 72 Query: 73 MLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAK 132 ML Q R+ + T E AL+LEA+LIK+ +P +N LR ++ L ++ + Sbjct: 73 MLAQVARVEVLVTHTETEALVLEAQLIKKHRPHYNILLRDDKSYPYLYIDTSSAFPRMSL 132 Query: 133 EVDFSRAP-NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL---SRGRACFRSALKR 188 R + FG + A+ AL+ + + L E +R RAC ++R Sbjct: 133 HRGTQRGKGHYFGPY----PAVSALRESMVLLQKAFRLRTCEDSVFHNRSRACLHYQIRR 188 Query: 189 CAGACCGKESHEEHALRLRQSL 210 C+G C G + + L+ +L Sbjct: 189 CSGPCVGHIDEKSYHRDLQDAL 210 >UniRef50_C6MYN0 Excinuclease ABC subunit n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MYN0_9GAMM Length = 620 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 16/201 (7%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA----AMLRQSRR 79 L FL LP PG+Y + T+ LY+GK+ N++ RV S+ + +++ Q Sbjct: 10 LTQFLAKLPNEPGIYRMLDQEGTV-LYVGKAANLKKRVTSYFNKQNTGVKTRSLVSQIAS 68 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK----RVDVVYAKEVD 135 I T E ALLLE+ LIK +P +N LR ++ + L+E R++ +K+ Sbjct: 69 IEISVTRSETEALLLESNLIKALRPKYNVLLRDDKSYPYIHLSEHPDFPRIESYRSKKKP 128 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGAC 193 A N FG + + A + + TI K+ C +R R C + +KRC C Sbjct: 129 L--AGNFFGPYPSVTAVKETIVTIQKVFKIRNCRDSYF---NARSRPCLQYQIKRCTAPC 183 Query: 194 CGKESHEEHALRLRQSLERLR 214 + +E+ ++ ++ L+ Sbjct: 184 VHYITSDEYQRSVQDAMRFLQ 204 >UniRef50_C7LTD0 Excinuclease ABC, C subunit n=2 Tax=Desulfovibrionales RepID=C7LTD0_DESBD Length = 605 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 26/202 (12%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRR 79 R L PT PGVYL + + +Y+GK+ ++R R+ S+ + P M+ + Sbjct: 4 RKILPSFPTCPGVYLMKNATGRI-IYVGKAKHLRRRLASYFQPEHRLAPKVRVMMTRVET 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEKRVDVVYAKEVDFS 137 I ++CT+ E ALLLEA LIK+ +P +N LR ++Q L L N + ++V Sbjct: 63 IDFLCTSTEKEALLLEASLIKKHRPKYNIVLRDDKQYVLFCLSRNHPFPALRLTRKV-LR 121 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL------SRGRACFRSALKRCAG 191 FG F + AL A +T +++ L L +R R C + + RC G Sbjct: 122 DGSVYFGPFTS---ALSARET----KRVIDRLFPLRKCRDTVFSNRTRPCLQYHIGRCLG 174 Query: 192 ACCGKESHEEHALRLRQSLERL 213 CC S EE+ RQ + R+ Sbjct: 175 PCCLPVSEEEY----RQVVRRV 192 >UniRef50_C6XFB9 Excinuclease ABC subunit C n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFB9_LIBAP Length = 616 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 90/179 (50%), Gaps = 11/179 (6%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQSRRISWICTA 86 +P PGVY + + LY+GK+ N++ R+ S++ + + M+ Q I + T Sbjct: 6 MPECPGVYQMLDIAGRV-LYVGKAYNLQKRIKSYMHSNNHTHRITHMISQINNIRFTVTC 64 Query: 87 GEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK-RVDVVYAKEVDFSRAPNLFGL 145 E+ ALLLEA +IK +P FN LR ++ + + +K ++ +Y + + FG Sbjct: 65 TEVEALLLEANMIKRLKPRFNILLRDDKSFPYILITDKHKIPALYKHRDSSTIQGSYFGP 124 Query: 146 FANRRAALQALQTIADEQKLCYGLLGLEPL--SRGRACFRSALKRCAGACCGKESHEEH 202 FA+ A + + ++ Q+ + + + R R C +KRC+G C G+ S E++ Sbjct: 125 FASVDAVEKTINSL---QRTFFLRSCADSVFRHRTRPCLLFQIKRCSGPCTGEISSEKY 180 >UniRef50_Q5GSR4 UvrABC system protein C n=10 Tax=Wolbachia RepID=UVRC_WOLTR Length = 606 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 11/189 (5%) Query: 32 PTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQSRRISWICTAG 87 P GVY G+ D + LY+GK+ N++SR+ ++LR + + ML Q ++ + T Sbjct: 18 PQSCGVYQMIGDKDKV-LYVGKAKNLKSRLSNYLRYENLSERTKFMLSQVIKVEVLVTEN 76 Query: 88 EIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP-NLFGLF 146 EI ALLLEARLIK +P +N + R + +++ + F + + +G F Sbjct: 77 EIDALLLEARLIKSLKPPYNIIFKDGRSYPYIVISKHNYPRIAQYRGKFKKGEFHYYGPF 136 Query: 147 ANRRAALQALQTIADE--QKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHAL 204 + A Q + ++ ++C S R C +KRC+ C GK + +++ Sbjct: 137 ISVAAVKQTMLSLQKTFLLRVCSDQYF---ASTKRPCIEYQIKRCSAPCVGKITKDDYCQ 193 Query: 205 RLRQSLERL 213 ++Q+ + L Sbjct: 194 SVKQTRDTL 202 >UniRef50_B3QRR8 Excinuclease ABC, C subunit n=3 Tax=Bacteria RepID=B3QRR8_CHLT3 Length = 640 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 10/190 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQ 76 E L+ L +LPT PGVY F + D +Y+GK+ N+R+RV S+ R E + ++R+ Sbjct: 28 EALQFKLKNLPTSPGVYQFK-DKDERVIYVGKAKNLRARVQSYFRNLSEHSGKTRLLVRR 86 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 + I T E+ AL+LE LIK+ +P +N L+ ++ + + + V+ Sbjct: 87 IMDLELILTGTEVEALILENNLIKQLKPRYNINLKDDKSYPYIVVTNEPFPRVFPTRNVR 146 Query: 137 SRAPNLFGLFANRRAALQALQTIAD--EQKLCYGLLGLEPLS--RGRACFRSALKRCAGA 192 +G + R L I++ + + C + E ++ + + C +K+C G Sbjct: 147 RDGSKYYGPYTETRQMRMLLDAISEIFQVRSCSLNMTDENIAARKFKVCLDYHIKKCLGP 206 Query: 193 CCGKESHEEH 202 C +S E++ Sbjct: 207 CEALQSREDY 216 >UniRef50_D2RIL8 Excinuclease ABC, C subunit n=3 Tax=Veillonellaceae RepID=D2RIL8_ACIFE Length = 618 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 13/182 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQ 76 + ++ L LP PGVY+ H S + +Y+GK+V +++RV S+ R +P A+ Sbjct: 3 DAIKETLAVLPNAPGVYIMHDASGKV-IYVGKAVILKNRVRSYFRPASQVSPKVRAINAH 61 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN--EKRVDVVYAKEV 134 I I TA E+ AL+LE LIK+ +P +N L+ ++ L++ E +V + V Sbjct: 62 VASIETIVTASEMEALILECNLIKKYRPRYNIDLKDDKTYPYLKITVGEAYPRMVLTRRV 121 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 +G FA+ A ++ I + + L L+ R C + L RC C Sbjct: 122 -LKDGARYYGPFADAGALRDTMKLI----RTMFPLRHCRNLNAKRPCLQYHLHRCLAPCT 176 Query: 195 GK 196 GK Sbjct: 177 GK 178 >UniRef50_UPI0001C3237F excinuclease ABC, C subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3237F Length = 647 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 81/178 (45%), Gaps = 9/178 (5%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA---MLRQSRRISWICTAG 87 LP +PGVYLF T+ +Y+GK+ +I+ RV SH P +L RI + + Sbjct: 38 LPDQPGVYLFRNAKSTV-IYVGKAKSIKKRVASHFSNPSTQMGRDLLPMIDRIESLVVST 96 Query: 88 EIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEKRVDVVYAKEVDFSRAPNLFGL 145 E ALL E IK+ +P FN RLR ++ + L+E V + +E R FG Sbjct: 97 EAEALLAEQNFIKQYKPRFNIRLRDDKSYPYIGISLDEDFPRVYFTRE-RHRRERAYFGP 155 Query: 146 FANRRAALQALQTIADEQKLCYGLLGLEPLSR-GRACFRSALKRCAGACCGKESHEEH 202 ++N + + L + + L G P R G C +KRC C + E + Sbjct: 156 YSNAKRVRETLDLLG-KIFLFRSCDGPTPGRRSGSPCLDYYIKRCEAPCVDYVTKEHY 212 >UniRef50_C8WI08 Excinuclease ABC, C subunit n=3 Tax=Coriobacteriaceae RepID=C8WI08_EGGLE Length = 737 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 23/212 (10%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQS 77 E ++ LN +PT PGVYL+ +S + +Y+GK+ +R+R+ ++ DE A ++ Q Sbjct: 60 ERIKEELNSVPTLPGVYLWKDKSGQV-IYVGKAKQLRARMRQYVNFQDERAKIPLLVDQI 118 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV--DVVYAKEVD 135 +I E +L+LE LI + P FN + ++ + L + V + Y +E Sbjct: 119 DSFDYIVVENEHESLVLEKNLINQHAPFFNADFKDDKSYPFIALTKGDVFPAIKYTREKH 178 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGL----------LGLEPLS----RGRAC 181 + FG + + RAA + LC L +PL+ R C Sbjct: 179 RADT-KYFGPYTDSRAARDMVDIARRVVPLCATSCADWRQLKRRLEKDPLALMSHDARPC 237 Query: 182 FRSALKRCAGACCGKESHEEHALRLRQSLERL 213 F + + GACCG + E++ + +++ +ER Sbjct: 238 FDAHVGLGPGACCGGITPEDYRVHVKR-IERF 268 >UniRef50_Q6MDC8 UvrABC system protein C n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=UVRC_PARUW Length = 610 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 21/214 (9%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAML-----RQSRRISWICT 85 PT PGVYL E + LY+GK+ N+R RV + + ++ + I I Sbjct: 11 FPTLPGVYLMKNEEGEV-LYVGKAKNLRQRVKQYFVPGRDGRLMIPYLVAKINYIETIVV 69 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGL 145 E ALLLE LIK+ +P +N L+ ++ AL++++ + V + P GL Sbjct: 70 TSEKEALLLENNLIKQHKPRYNALLKDDKSYIALKISQNDAWAT-VRLVRYKGTPEPDGL 128 Query: 146 FANRRAALQALQTIADEQKLCYGLLGLEPLS------RGRACFRSALKRCAGACCGKESH 199 + + QA + D L L L S R R C +KRC G C K + Sbjct: 129 YFGPYTSAQAARQTLD---LLNRLFPLRQCSDQEFARRTRPCLLYQMKRCVGPCTQKCTK 185 Query: 200 EEHALRLRQSLERLRVVCWPWQGAVALKEQHPEM 233 E+ L ++++ LR Q LK+ + EM Sbjct: 186 GEYQQHLDRTIKFLR-----GQNKDVLKDLYEEM 214 >UniRef50_A4X9Y0 DNA polymerase III, epsilon subunit n=6 Tax=Actinomycetales RepID=A4X9Y0_SALTO Length = 607 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 98/215 (45%), Gaps = 22/215 (10%) Query: 10 LEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPD 69 +EF A A+ R LP PGVYLF G +D PLY+G S++I +RV S+ + Sbjct: 232 IEF-ARAVTPTQRRKRHLAEGLPHSPGVYLFRG-ADNRPLYVGTSIDIATRVRSYFTAAE 289 Query: 70 EAA----MLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK- 124 + A ML + R+ + A + A + E RLI P +N+R + ++ L+L ++ Sbjct: 290 KRARISEMLAAAERVEAVECAHSLEAEVRELRLIGTHAPPYNRRSKFPERVVWLKLTDEA 349 Query: 125 --RVDVVYAKEVDFSRAPN---LFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSR 177 R+ VV + AP G F +RRAA A D L C L + ++ Sbjct: 350 YPRLSVVR------NLAPGDEAYLGPFTSRRAAELAAAGFHDAMPLRQCTHRLSVRKVT- 402 Query: 178 GRACFRSALKRCAGACCGKESHEEHALRLRQSLER 212 AC + L RC C + + E+A R R Sbjct: 403 -PACAVAELGRCPAPCEHRITPTEYADRATTPFRR 436 >UniRef50_B0SB16 UvrABC system protein C n=6 Tax=Leptospira RepID=UVRC_LEPBA Length = 614 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 12/184 (6%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQSRRISW 82 + +L + PG YL+ E + +Y+GK++ ++SRV S+L P++ A+ + + W Sbjct: 14 IKNLGSLPGCYLWKNELGQV-IYVGKALKLQSRVRSYL-NPNQKDRKTRALFVELYDLDW 71 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ---LCALQLNEKRVDVVYAKEVDFSRA 139 I T E ALLLEA LIK+ P FN RL+ +++ LC + +E V ++V Sbjct: 72 IATGTEKEALLLEATLIKKYNPKFNVRLKDDKKYPFLC-VSTSEDYPMVFLTRKVK-DNG 129 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 FG F + +AA L+ I + L L R C + RC G C G + Sbjct: 130 DRYFGPFTDVKAARDTLELIHRIFPIRKTKLKLPLPKPQRPCLNFHMGRCLGPCQGNVTK 189 Query: 200 EEHA 203 + ++ Sbjct: 190 DTYS 193 >UniRef50_B2A711 Excinuclease ABC, C subunit n=2 Tax=Firmicutes RepID=B2A711_NATTJ Length = 685 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 15/190 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQS 77 E L+ L +LP +PGVYL + + +Y+GK++N+++RV S+ + ++A M + Sbjct: 4 EDLQEKLANLPEKPGVYLMKSKQGRV-IYVGKAINLKNRVRSYFNSGNKAVKVQVMTPKI 62 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN--EKRVDVVYAKEVD 135 I I T E+ AL+LE LIK+ +P +N LR ++ L++ E ++ A+ + Sbjct: 63 SDIETIVTDSELEALILENNLIKKYRPKYNVSLRDDKNYPYLKITTEEDYPRLIIARRM- 121 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRG-RACFRSALKRCAGA 192 + FG + N A + ++ + +KL G P ++G R C + RC Sbjct: 122 -GKHGRYFGPYPNAGAVRETIKLL---RKLFPVRTCKGETPKNQGKRPCLNYFINRCLAP 177 Query: 193 CCGKESHEEH 202 C K S +E+ Sbjct: 178 CNEKVSRDEY 187 >UniRef50_D2R0D2 Excinuclease ABC C subunit domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R0D2_9PLAN Length = 493 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 21/199 (10%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSH-LRTPDE----AAMLRQSRRISW 82 + + P PG+YL ++ + +Y+GK+ N+RSR S+ LR E A + + I + Sbjct: 68 VREFPRTPGIYLMKDDAGRV-IYVGKAKNLRSRAGSYFLRGAKEEYRTAIWVDEICDIDY 126 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK----RVDVVYAKEVDFSR 138 + E+ ALL+EARLIK+ QP NK L+ ++ L ++ + RV+V R Sbjct: 127 VECESEVDALLMEARLIKDIQPKHNKELKDDKTFPYLMISTREDFPRVEVTRQPA---DR 183 Query: 139 APNLFGLFANR---RAALQALQTIADEQKLCYGLLGLEPLSR-GRACFRSALKRCAGACC 194 LFG FA+ R A+Q LQ I + + + R R C +++++C C Sbjct: 184 GVKLFGPFASAGSLRGAVQVLQRIFKFRTCSLDIEDGDDRWRWFRPCLLASIQQCTAPCN 243 Query: 195 GKESHEEHALRLRQSLERL 213 + S +E+ R+ ++RL Sbjct: 244 LRISKDEY----RRDIDRL 258 >UniRef50_D0LVJ3 Excinuclease ABC, C subunit n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LVJ3_HALO1 Length = 689 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 86/183 (46%), Gaps = 20/183 (10%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAML-------RQS 77 + F +PT PGVYL S + +Y+GK+ N+R+RV + R +A R Sbjct: 11 KEFFERIPTAPGVYLMKDRSGRV-VYVGKAKNLRTRVRQYFRPGADARFFVAAGLLARVL 69 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK----RVDVVYAKE 133 I + E ALLLE LIK+ QP FN LR ++Q L+++ RV+VV Sbjct: 70 ADIDTVVVDNEKEALLLENHLIKKHQPRFNINLRDDKQYLVLRIDPNADYPRVEVVRNIR 129 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAG 191 D +R FG + + + + L+ + +L C + +R R C + +KRC G Sbjct: 130 DDQAR---YFGPYHSATSCRETLRLLNRHFQLRTCTDHV---LRTRTRPCLQYQIKRCPG 183 Query: 192 ACC 194 C Sbjct: 184 PCV 186 >UniRef50_A6SXR9 UvrABC system protein C n=19 Tax=Betaproteobacteria RepID=UVRC_JANMA Length = 618 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 20/226 (8%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRV----LSHLRTPDEAAMLRQSRRISWICTA 86 LP PGVY + D + LY+GK+ +++ RV L +L +P A M+ + R+ T Sbjct: 20 LPNLPGVYRYFDAEDNL-LYVGKARDLKKRVSSYFLKNLASPRTALMVERIARLETTVTR 78 Query: 87 GEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVD--VVYAKEVDFSRAPNLFG 144 E ALLLE LIK QP +N R ++ L++ + Y VD + FG Sbjct: 79 SEAEALLLENNLIKTLQPRYNILFRDDKSYPYLKITGQEYPRMAYYRGAVD--KKNQYFG 136 Query: 145 LFANRRAALQALQTIADEQKLCYGLLGLEP---LSRGRACFRSALKRCAGACCGKESHEE 201 F + A +++Q + QK+ + L E +R R C + RC+G C S E+ Sbjct: 137 PFPSGWAVKESMQIL---QKV-FLLRTCEDSVFANRTRPCLLHQIHRCSGPCVNFISKED 192 Query: 202 HALRLRQSLERLR----VVCWPWQGAVALKEQHPEMTQYHIIQNWL 243 +AL + + + LR V QG + + + Q +++N + Sbjct: 193 YALDVENAAKFLRGRQSEVLETLQGKMLAYAEELKFEQAALVRNQI 238 >UniRef50_C1PCU9 Excinuclease ABC C subunit domain protein n=1 Tax=Bacillus coagulans 36D1 RepID=C1PCU9_BACCO Length = 361 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 24/216 (11%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-TPDEAA--MLRQSRRISWIC 84 L+ LP PG YL + +Y+GK+ +++RV S+ + DE ++ + + WI Sbjct: 9 LSLLPEEPGCYLMKSREGEI-IYVGKAKKLKNRVRSYFTGSHDEKTTQLVGEIFDLEWIV 67 Query: 85 TAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSRAPNLF 143 TA AL+LE LIK+ +P +N L+ ++ +++ +E+ ++ +E + F Sbjct: 68 TATNTEALVLEMNLIKQYRPKYNIMLKDDKSYPFIKITDERHPQLILTREAGRDKG-KYF 126 Query: 144 GLFANRRAALQALQTIADEQKLCYGLLGLE--PLSRGRACFRSALKRCAGACCGKESHEE 201 G F N RAA A+ +K+ L L P S R C L C G C + EE Sbjct: 127 GPFPNARAA-------AETKKVLDRLYPLRRCPESSTRPCLYYQLGLCIGTCAREVGEEE 179 Query: 202 HALRLRQSLERLRVVCWPWQGA--VALKEQHPEMTQ 235 + E++R + + G LK+ EM Q Sbjct: 180 YK-------EQIRKIVHFFHGGYRAVLKDMKKEMLQ 208 >UniRef50_C2MAD2 Excinuclease ABC subunit C n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MAD2_9PORP Length = 602 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 95/195 (48%), Gaps = 12/195 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQS 77 + +++ L +P PG Y + ++ T+ +Y+GK+ N+R+RV S+ + P ++ + Sbjct: 4 DEIKAILPTIPQEPGCYQYRNKNGTI-IYVGKAKNLRNRVSSYFNNSPKNPKTTRLVSEI 62 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 R++ + E AL+LE LIK P +N L+ ++ + + ++ ++A + Sbjct: 63 RQLEYFVVNTEAEALVLENNLIKTHLPKYNILLKDDKSYPRIVITDEPFPRIFATRKEVG 122 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRA--CFRSALKRCAGAC 193 + + FG + N A + I +L C L E + R C + +K+C G C Sbjct: 123 KG-DYFGPYPNVAMAHTVIDLIHRVLQLRSCRYALTPEVVRERRVDLCLQYHIKKCGGPC 181 Query: 194 CGKESHEE--HALRL 206 G S EE H+++L Sbjct: 182 QGFVSAEEYDHSVQL 196 >UniRef50_Q03F33 UvrABC system protein C n=7 Tax=Firmicutes RepID=UVRC_PEDPA Length = 594 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 19/189 (10%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE---AAMLRQSR 78 EH+ L LP +PG Y + + +Y+GK+ N+++RV S+ ++ E A ++ + Sbjct: 4 EHIEHKLALLPDKPGCYQMKNLNSQI-IYVGKAKNLKNRVRSYFKSSHEGKTAKLVSEIA 62 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEK--RVDVVYAKEVD 135 +I T+ + A LLE LI++ QP +N +L++ +++ NEK R+++V + D Sbjct: 63 DFDYIVTSSDKEAFLLEITLIQKFQPYYNIKLKKGTGYPYIKITNEKDPRMEIVSSVRRD 122 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGAC 193 FG + N AA + L + L C G +GR C + +C GAC Sbjct: 123 ---GGFYFGPYPNVYAAEETLHFLEKVYPLRRCNGF-------QGRPCLYYHMGQCLGAC 172 Query: 194 CGKESHEEH 202 + EE+ Sbjct: 173 FQEVPKEEY 181 >UniRef50_Q21AW5 UvrABC system protein C n=89 Tax=Alphaproteobacteria RepID=UVRC_RHOPB Length = 699 Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 89/191 (46%), Gaps = 15/191 (7%) Query: 32 PTRPGVY-LFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQSRRISWICTA 86 PT PGVY + + SD LY+GK+ N++ R+ S+ R M+ + + I TA Sbjct: 91 PTSPGVYRMLNAASDV--LYVGKAKNVKKRLASYARPTGHVVRISRMIAATVSVEIISTA 148 Query: 87 GEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKEVDFSRAPNLFGL 145 E ALLLEA LIK+ +P FN LR ++ + + + SR FG Sbjct: 149 TETEALLLEANLIKQLRPRFNVLLRDDKSFPYILITGDHWAPQIIKHRGAQSRPGRYFGP 208 Query: 146 FANRRA---ALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 FA+ + + ALQ A + C E SR R C +KRCAG C G+ + Sbjct: 209 FASVGSVNRTITALQR-AFLMRSCTDAF-FE--SRTRPCLLYQIKRCAGPCTGEIDFPGY 264 Query: 203 ALRLRQSLERL 213 +R++ + L Sbjct: 265 TALVREATDFL 275 >UniRef50_A8GP33 UvrABC system protein C n=14 Tax=Rickettsia RepID=UVRC_RICAH Length = 651 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 58/193 (30%), Positives = 100/193 (51%), Gaps = 22/193 (11%) Query: 22 EHLRSFLNDLPTRPGVY-LFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRR- 79 E ++S L D P R GVY +F + + +Y+GK+ N++ R+ ++++ + LR Sbjct: 9 ELIKSKLIDAPERCGVYRMF--DVNKQVIYVGKAKNLKKRLTHYIKSDLDNKTLRMIANT 66 Query: 80 --ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 + + T E+ ALLLEA+LIK+ QP FN L+ ++ ++L R+D + + + + Sbjct: 67 CFLEYSITNSEVEALLLEAQLIKKFQPKFNILLKDDKSFPFIKL---RLDHDFPQLLKY- 122 Query: 138 RAPNL-----FGLFANRRAALQALQTIADEQKLCYGLLGLEP---LSRGRACFRSALKRC 189 R L FG FA +A + T+ + QK+ + L SR R C + +KRC Sbjct: 123 RGKTLNDGKCFGPFA---SATEVNTTLTELQKI-FKLRSCTDNYFNSRTRPCMQYEIKRC 178 Query: 190 AGACCGKESHEEH 202 C GK + E++ Sbjct: 179 YAPCVGKINKEDY 191 >UniRef50_UPI00016BFB47 excinuclease ABC, C subunit n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFB47 Length = 602 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 14/183 (7%) Query: 30 DLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRRISWIC 84 +LPT PGVYL + D + +Y+GK+ N+++RV + + + M+ +I Sbjct: 3 NLPTTPGVYLMKDDLDEV-IYVGKAKNLKNRVSQYFQKNKNHSAKTIKMVSNIASYEYIV 61 Query: 85 TAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK----RVDVVYAKEVDFSRAP 140 T E+ AL+LE LIK+ P +N RL+ +++ +++N K R+ VV D ++ Sbjct: 62 TNTEVEALILECNLIKKYSPKYNIRLKDDKRYPYIKINIKSPFPRIQVVRKIIKDDAK-- 119 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGL-EPLSRGRACFRSALKRCAGACCGKESH 199 FG + + + + ++ I +L L + + + R C + RC+G C + Sbjct: 120 -YFGPYTDATSMWEMIELIKQLWQLRSXNKKLPKDIGKNRECLNFHIGRCSGPCIKNITA 178 Query: 200 EEH 202 E+ Sbjct: 179 REY 181 >UniRef50_Q0F271 Excinuclease ABC subunit C n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F271_9PROT Length = 611 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 12/174 (6%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISWI 83 L LP PGVY + + +Y+GK+ N+R RV S+ + +P AM+RQ R I++ Sbjct: 9 LTALPREPGVYRMLDHARKV-IYVGKARNLRKRVSSYFQRQPESPRTIAMVRQVRDIAFS 67 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLF 143 T E AL+LE LIK+ +P +N ++ ++ + L+++ + + + F Sbjct: 68 VTPSEAEALVLEHNLIKQLKPRYNVLMKDSKTYPYILLSDEPFPKLTMYRGNRTLPGEYF 127 Query: 144 GLFANRRAALQALQTIADEQKLCYGLLGLEPL---SRGRACFRSALKRCAGACC 194 G F N A Q L + + + L E +R R C + + RC+ CC Sbjct: 128 GPFPNAGAVHQTLHIM----QSMFLLRDCEDAVFNNRSRPCMQHQIGRCSAPCC 177 >UniRef50_C4FUE0 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUE0_9FIRM Length = 604 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 58/198 (29%), Positives = 87/198 (43%), Gaps = 22/198 (11%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRIS 81 E + + L LP PG YL +D + LY+GK+ N+++RV S+ R + + I Sbjct: 17 ERIEAKLKLLPDLPGCYLMKDAADQI-LYVGKAKNLKNRVRSYFRGAHDTKTTKLVSEID 75 Query: 82 ---WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 I T ALLLE LI++ +P FN RL+ L++ ++R + Sbjct: 76 HFEIIITNSNKEALLLEINLIQQYKPPFNIRLKEGTMYPYLKITKERHPQLIITSNVTKD 135 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR-----GRACFRSALKRCAGAC 193 FG F N AA Q Q L + PL R RACF L +C G C Sbjct: 136 GGLYFGPFPNVGAATQTQQL----------LHRVYPLRRCGKNEKRACFYYHLGQCIGPC 185 Query: 194 ---CGKESHEEHALRLRQ 208 K+ +E+ +++Q Sbjct: 186 DHEVTKDMYEQQIQKIKQ 203 >UniRef50_Q7VK73 UvrABC system protein C n=2 Tax=Helicobacter RepID=UVRC_HELHP Length = 621 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 34/204 (16%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR------------TPDEAAMLR 75 L DLPT+ G+Y F DT+ LY+GK+ N+++R+ S+L +P A M+ Sbjct: 15 LADLPTQSGIYQFFDNEDTL-LYVGKAKNLKNRIKSYLSIENKHIVPKNNLSPRIALMVS 73 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK----RVDVVYA 131 Q RI + T E AL+LE LIK +P +N LR ++ + +++ R ++ Sbjct: 74 QITRIHTLLTNNEQDALILENSLIKSLKPKYNILLRDDKTYPYIYIDKSLPYPRFEL--T 131 Query: 132 KEVDFSRAPNLFGLFANRRAALQALQTIAD-----EQKLCYGLLGLEPLSRGRACFRSAL 186 ++V S FG F + A + L ++ D ++K C + +AC + Sbjct: 132 RQVLKSNQIQYFGPFVS--GARELLDSLYDNLPLVQKKSC--------VKGKKACIFHQI 181 Query: 187 KRCAGACCGKESHEEHALRLRQSL 210 +C C K S + +A + Q + Sbjct: 182 HKCPAPCENKVSIQTYAQTIAQGI 205 >UniRef50_A5EW70 UvrABC system protein C n=1 Tax=Dichelobacter nodosus VCS1703A RepID=UVRC_DICNV Length = 607 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 17/186 (9%) Query: 27 FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISW 82 FL+ + T GVY ++ T+ LY+GK+ N+R R+ + + + A++R I Sbjct: 13 FLSHVSTLSGVYQMRDQNGTV-LYVGKAKNLRQRLSHYFQKTGLSVKTRALMRAVYDIQT 71 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ---LCALQLNEKRVDVVYA--KEVDFS 137 T E ALLLE LIK+ QP FN LR ++ +C Q + R+ + K DF Sbjct: 72 TSTPTEAEALLLENNLIKQYQPKFNILLRDDKSYPYICLSQHDFPRLFLYRGARKNGDF- 130 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG + N ++A AL + +L L +R R C + +KRC C GK Sbjct: 131 -----FGPYPNVQSAHHALAILQKVFRLRPCLDSFFK-NRSRPCLQYQIKRCYAPCVGKI 184 Query: 198 SHEEHA 203 S E +A Sbjct: 185 SAEMYA 190 >UniRef50_D1B5F2 Excinuclease ABC, C subunit n=2 Tax=Synergistaceae RepID=D1B5F2_THEAS Length = 479 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 15/183 (8%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQ 76 E L + LP RPGVY+ + D +Y+GK+ +R RV+S+ R +P ++ Sbjct: 4 EALMKHVRSLPERPGVYIMR-DRDGNVIYVGKAKALRRRVMSYFRHGNFASPRLRKLVET 62 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 IS + TA E AL+LEARLI++ +P FN L+ + + +++ ++R V Sbjct: 63 VHDISVMRTATEAEALILEARLIRQLKPFFNVELKMSERYPYIRVTQERF-----PRVMV 117 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGL----LGLEPLSRGRACFRSALKRCAGA 192 +R GLF ++ L+ + + L +EP R C A+ +C Sbjct: 118 TRVRKGEGLFIGPYVKVRELRELLRLLDRFFPLRKCSFPIEPPYDRRPCIYHAIGKCLAP 177 Query: 193 CCG 195 C G Sbjct: 178 CAG 180 >UniRef50_C1AB71 Putative exonuclease n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AB71_GEMAT Length = 366 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 100/245 (40%), Gaps = 39/245 (15%) Query: 37 VYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLRQSRRISWICTAGEIGAL 92 +YL G + LY+GKS +R+R+LS+ R P A MLR++ I W E AL Sbjct: 1 MYLMRGGRGDV-LYVGKSTQVRTRLLSYFRLPWPEHRHARMLRETAHIEWEPHPSEFAAL 59 Query: 93 LLEARLIKEQQPLFNKRLRRNRQ----LCALQLNEKRVDVVYAKEVDFSR-APNLFGLFA 147 L E RLI+ P +N R R + + R+ V A SR + G FA Sbjct: 60 LREVRLIRAHLPRYNVRSARPLDKWWVITIAKGLTPRLRVQRASAAARSRDVAQIIGPFA 119 Query: 148 NRRAALQALQTIADEQKL--CYGLLGLE-------------PLSRGRACFRSALKRCAGA 192 +RR + AL+ + D L C + + + R AC R +RC G Sbjct: 120 SRRPLVDALRVLNDALGLRDCSDRIRMHVRDVAELFEEHHPAMQRTPACHRYETRRCLGP 179 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C G S E+ R L R A A+ E + Q H+++ A S E Sbjct: 180 CVGATSEYEY----RTQLTR----------AKAVLEGRDDSPQQHLVREMAVASAALSYE 225 Query: 253 EATTL 257 A L Sbjct: 226 RAGWL 230 >UniRef50_B9XGZ6 Excinuclease ABC C subunit domain protein n=2 Tax=Verrucomicrobiales RepID=B9XGZ6_9BACT Length = 559 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/200 (28%), Positives = 89/200 (44%), Gaps = 35/200 (17%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRISWI 83 +RS LN+LP +PG+YL T+ +Y+GK+ ++R RV + SR++ W Sbjct: 7 IRSKLNELPHKPGIYLMKDRFGTV-IYVGKARDLRKRVSQYFHP---------SRKMGWD 56 Query: 84 ----------------CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK--- 124 E ALLLE +LIKE P +N + +++ L++N Sbjct: 57 LKFKALTEAIYDLDVHVVRSEPEALLLEGKLIKEFHPRYNISFKDDKRFLMLKVNLNDPI 116 Query: 125 -RVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRG-RACF 182 R + K+ D +R FG FA+ +AL+ T+ Q G L P R + C Sbjct: 117 PRFTLTRFKQDDGAR---YFGPFAH-SSALKNTLTMIRRQFHLRGCRPLTPNERDYKHCL 172 Query: 183 RSALKRCAGACCGKESHEEH 202 LK C C G + E++ Sbjct: 173 YGNLKHCTAPCIGNVTREQY 192 >UniRef50_Q2LR71 UvrABC system protein C n=1 Tax=Syntrophus aciditrophicus SB RepID=UVRC_SYNAS Length = 618 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 13/200 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAML----RQS 77 + L ++ P PGVYL + + LY+GK+ N++SR ++ D AM+ + Sbjct: 4 QQLEGRIDIAPRTPGVYLMKDAAGKI-LYVGKAKNLKSRTRAYFSGTDSRAMIPFLVSRI 62 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ--LNEK--RVDVVYAKE 133 I +I T E AL+LE LIKE P +N R ++ ++ LNE R +V Sbjct: 63 HDIEFILTETEKEALILENNLIKEHHPRYNICFRDDKAYFNIRADLNEPFPRFQLVRRPR 122 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 D ++ + A+ R LQ LQ+I + C E SR R C +KRC C Sbjct: 123 KDGAKYFGPYPSSASARETLQFLQSIF-PLRTCRDA---ELKSRTRPCLEYQIKRCLAPC 178 Query: 194 CGKESHEEHALRLRQSLERL 213 G+ + E++ +R + L Sbjct: 179 VGRINSEDYLQMVRDGVSFL 198 >UniRef50_Q1D921 UvrABC system protein C n=2 Tax=Cystobacterineae RepID=UVRC_MYXXD Length = 646 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 18/178 (10%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-RTPDE---AAMLRQS-RRISW 82 L+ LPT PGVYL + +Y+GK++N+RSRV S+ RT D ++L Q + Sbjct: 9 LDALPTEPGVYLMKDRRGQV-IYVGKAINLRSRVRSYFNRTGDTRVFVSLLDQLLGDLET 67 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK----RVDVVYAKEVDFSR 138 + + E ALLLE LIK+ +P FN L+ ++Q +L+L+ R++VV E D +R Sbjct: 68 VLVSNEKEALLLENELIKKHRPRFNVLLKDDKQFISLRLDRTQPYPRLEVVRKYERDGAR 127 Query: 139 APNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGACC 194 FG +++ A + L+ + +L C + +R R C + RC C Sbjct: 128 ---YFGPYSSAGAIRETLRVVNRFFRLRTCTDHV---LANRKRPCLLHQIGRCPAPCV 179 >UniRef50_Q11YP9 UvrABC system protein C n=3 Tax=Bacteroidetes RepID=UVRC_CYTH3 Length = 596 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 10/196 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEA--AMLRQ 76 E +RS L +LP+ PGVY F+ + +Y+GK+ ++R RV ++ + D+ +M+R+ Sbjct: 5 EDIRSLLKELPSSPGVYRFYSIEKEL-IYVGKAKSLRKRVANYFTNKKNLDQKTRSMVRK 63 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 + E ALLLE LIKE +P +N LR ++ + L+ + Sbjct: 64 IYHAEYTLVNSEYEALLLENNLIKENKPKYNVLLRDDKTYPFICLSSADFPTLTTTRKID 123 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS----RGRACFRSALKRCAGA 192 + FG + + RA ++++ + L L + + + C + C G Sbjct: 124 KKKGEYFGPYTSGRAMHSLVESLRKTFFIRTCDLNLTKQNIDAHKFKVCLEYHIGNCKGP 183 Query: 193 CCGKESHEEHALRLRQ 208 C GK+ E++ + + Q Sbjct: 184 CEGKQEKEDYDVSIIQ 199 >UniRef50_C7N5B1 Excinuclease ABC, C subunit n=6 Tax=Coriobacteriaceae RepID=C7N5B1_SLAHD Length = 666 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 28/214 (13%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQS 77 + ++ L +PT PGVYL+ + D +Y+GK+ +R+R+ ++ D+ A ++ Q Sbjct: 8 QDIKHQLASVPTLPGVYLWKNK-DGEVIYVGKAKQLRARMRQYVNFQDDRAKIPLLVDQI 66 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV--DVVYAKEVD 135 +I E AL+LE LI + P FN + N+ + L + V + Y +E Sbjct: 67 DSFEYIVVENEHEALVLEKNLINQYAPFFNADFKDNKSYPFIALTKGDVFPAIKYTREKH 126 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYG----------------LLGLEPLSRGR 179 + + FG + + RAA Q + + LC L + R Sbjct: 127 VA-STRYFGPYTDGRAARQLVDIVRKVVPLCSSSCAEWRRLKKKLDNDDLTAFLSETGTR 185 Query: 180 ACFRSALKRCAGACCGKESHEEHALRLRQSLERL 213 CF + + GACCG+ + E++ R+ +ER+ Sbjct: 186 PCFDAHVGLGPGACCGQITPEDY----RRHVERV 215 >UniRef50_C1F4W9 UvrABC system protein C n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=UVRC_ACIC5 Length = 645 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 8/177 (4%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQSR 78 L+ + LPT PGVYL+ +D +Y+GK+ N+RSRV S+L +A +++R++ Sbjct: 3 LQEKIRTLPTGPGVYLYKN-ADGEVIYVGKAKNLRSRVRSYLLEASQANAKTGSLMREAV 61 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS 137 + +I E AL LE LIK+++P FN LR ++ ++L R V+ Sbjct: 62 DLDYITVGNEHEALALENNLIKQRKPRFNVLLRDDKTYPYVKLTLGDRYPKVFVTRRLRK 121 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 +G F A + + I L + L RAC + +KRC G C Sbjct: 122 DGAAYYGPFFPGNLAYRIVDLIHRSFLLPSCKVDLSRYH-ARACLQYYIKRCLGPCV 177 >UniRef50_C9KP10 Excinuclease ABC subunit C n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KP10_9FIRM Length = 623 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 22/194 (11%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRRISW 82 L LP PGVY+ +++ +Y+GK+V +++RV + + +P AM+ Sbjct: 9 LKLLPDSPGVYIMK-DANGRIIYVGKAVVLKNRVRQYFQHNKNHSPKVKAMVSHIADFEI 67 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQL----CALQLNEKRVDVVYAKEVDFSR 138 I T E+ AL+LE LIK+ +P +N L+ ++ +Q RV + + D +R Sbjct: 68 IMTHSEVEALILECNLIKKHRPHYNISLKDDKSYPYVKVTVQEEYPRVFLTHRVTKDGAR 127 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS--RGRACFRSALKRCAGACCGK 196 FG + + A Q+L KL L L + R C +KRC C GK Sbjct: 128 ---YFGPYTDVTAVHQSL-------KLLRKLFPLRTCRHLQERPCLEYHIKRCLAPCVGK 177 Query: 197 ESHEEHALRLRQSL 210 + E++A +R L Sbjct: 178 VTEEDYAAMIRAVL 191 >UniRef50_Q31GI3 UvrABC system protein C n=2 Tax=Bacteria RepID=UVRC_THICR Length = 613 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 15/186 (8%) Query: 18 YEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA----AM 73 +E + +FL L RPGVYL + S + +Y+GK+ N++ RV S+ + E + Sbjct: 5 FETQFDIDAFLKHLTERPGVYLMYDASGQI-IYVGKAKNLKRRVSSYFKKRHEEIKTETL 63 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQL--CALQLNEKRVDVVYA 131 + Q I T E AL+LE LIK +P +N R ++ + +K + Y Sbjct: 64 VSQVASIEVTVTDTESEALILENTLIKRHKPRYNILFRDDKSYPYIFVSTGKKFPSLSYH 123 Query: 132 KEVDFSRAPNLFGLFANRRA---ALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKR 188 + + FG F N A L ALQ I ++ + R R C + +KR Sbjct: 124 RGAK-RKVGRYFGPFPNASAVHQTLHALQKIFPVRQCTESVFN----HRSRPCLQYQIKR 178 Query: 189 CAGACC 194 C+G C Sbjct: 179 CSGPCV 184 >UniRef50_B6INU7 Excinuclease ABC, C subunit, putative n=18 Tax=cellular organisms RepID=B6INU7_RHOCS Length = 694 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 13/196 (6%) Query: 22 EHLRSFLNDLPTRPGVY-LFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQ 76 E ++ +L LP RPGVY + E D LY+GK+ N++ RV ++ + M+ + Sbjct: 87 ETIKGYLRTLPDRPGVYRMLSAEGDV--LYVGKARNLKRRVTNYTQVAKLPVRLQRMVAE 144 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 + + ++ T E+ ALLLE+ LIK P +N LR ++ + + K Sbjct: 145 TVTMEFVTTHTEVEALLLESNLIKRLMPRYNVLLRDDKSFPHILITGDHPFPQLTKHRGA 204 Query: 137 -SRAPNLFGLFANRRAALQALQTI--ADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 RA + +G FA+ A + + + A + + C + SR R C + +KRC C Sbjct: 205 RDRAGSYYGPFASAGAVNRVMTALQRAFQIRTCTDTVF---ASRTRPCLQFQIKRCTAPC 261 Query: 194 CGKESHEEHALRLRQS 209 G+ +A ++ ++ Sbjct: 262 VGRVGDAGYAAQVAEA 277 >UniRef50_D1BFZ9 Exonuclease, DNA polymerase III, epsilon subunit family n=14 Tax=Actinomycetales RepID=D1BFZ9_SANKS Length = 616 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 12/188 (6%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE----AAMLRQSRRI 80 R + +P+ PGVY+F G D + LY+G S ++R+RV S+ ++ M+R + + Sbjct: 253 RHLADGMPSGPGVYMFVGPQDEV-LYVGTSTDVRTRVRSYFTAAEKRGRMTEMIRLAVTV 311 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK---RVDVVYAKEVDFS 137 + A + A + E RLI E P +N+R + ++ ++++ + R+ VV ++ + Sbjct: 312 RAVPCATALEARVRELRLITEHAPRYNRRSKHPERMHWVRVSSEAYPRLTVV--RDGTAA 369 Query: 138 RAPNLFGLFANRRAALQALQTI--ADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 + G F +R A +A++ + A + + C L P + AC + + RC+ C Sbjct: 370 LGEPVVGPFVSRARATEAVEALQSAHQVRQCTKKLPALPSATASACVLAEMGRCSAPCVR 429 Query: 196 KESHEEHA 203 S A Sbjct: 430 PSSRPTTA 437 >UniRef50_C2KQB5 Excinuclease ABC subunit C n=2 Tax=Mobiluncus mulieris RepID=C2KQB5_9ACTO Length = 702 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 17/185 (9%) Query: 30 DLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE-----AAMLRQSRRISWIC 84 ++PT PGVY + ++ +Y+GK+ N+R+R+ S+ P + A M+ + +SW+ Sbjct: 11 EIPTAPGVYRWR-DAHGRVIYVGKAKNLRNRLTSYFVDPAKLHPRTAKMVATAESVSWVV 69 Query: 85 TAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEK--RVDVVYAKEVDFSRAP 140 E+ AL LE IKE P FN + ++ A+ LN++ R+ V+ + R Sbjct: 70 VGSEVEALTLEYTWIKEYDPKFNVMFKDDKSYPYFAVTLNQEFPRMGVLRSAH---QRGV 126 Query: 141 NLFGLFANRRAALQA---LQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG + A Q L+T+ + G+ + GRAC + + RC+ C G+ Sbjct: 127 RYFGPYTAVWAIRQTSDLLETVFPVRTCTDGVFARA-RAAGRACLKGYIGRCSAPCIGRI 185 Query: 198 SHEEH 202 S EH Sbjct: 186 SAAEH 190 >UniRef50_UPI000050F72E excinuclease ABC subunit C n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F72E Length = 619 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 11/191 (5%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE-----AAMLR 75 P R +PT GVY F + D +Y+GK+ N+R+R+ S+ P + + M+ Sbjct: 4 PASYRPATGSIPTSAGVYKFR-DPDRRVIYVGKAKNLRNRLNSYFSNPAQLHPRTSTMVH 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEKRVDVVYAKE 133 + + W E+ AL LE I E P FN R ++ A+ +N++ V + Sbjct: 63 TAASVEWTVVDTEVEALQLEWTWINEFNPRFNVMFRDDKSYPYLAITMNDE-VPRAFITR 121 Query: 134 VDFSRAPNLFGLFANRRAALQALQTI--ADEQKLCYGLLGLEPLSRGRACFRSALKRCAG 191 + FG FA A L + A + C + GR C + +CA Sbjct: 122 GKRRKGVKYFGPFAQVWAIKDTLDLLLRAFPMRTCTAGVYRRAERSGRPCLLGYIDKCAA 181 Query: 192 ACCGKESHEEH 202 C G+ S E H Sbjct: 182 PCVGQISVEGH 192 >UniRef50_A7HD93 UvrABC system protein C n=5 Tax=Bacteria RepID=UVRC_ANADF Length = 716 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 21/201 (10%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEA--AMLRQS 77 +LR L++LP PG YL + +Y+GK+ ++RSRV S+ R D A A+L + Sbjct: 4 NLRKTLDELPAEPGCYLMKDRRGAV-VYVGKASSLRSRVRSYFDASRGDDRAFVALLDEL 62 Query: 78 -RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK----RVDVVYAK 132 + I T E A+LLE LIK +P FN RLR ++ L+L+E+ R++V A+ Sbjct: 63 LGDVEVIVTRSEKEAVLLENELIKRHRPRFNIRLRDDKDFIVLRLDERHAFPRLEVRRAR 122 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCA 190 E + A FG +++ + + L+ + +L C + E R R C +KRC Sbjct: 123 EPRRAGA-RYFGPYSSASSIRETLRVVNRHFQLRTCTDHV-FE--HRKRPCILYQIKRCP 178 Query: 191 GACCGKESHEEHALRLRQSLE 211 C E+ RQS+E Sbjct: 179 APCVYDVPEAEY----RQSVE 195 >UniRef50_C5CDH0 Excinuclease ABC, C subunit n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CDH0_KOSOT Length = 574 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 25/200 (12%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR--TPDEAAMLRQSRR----IS 81 + +LP +PG+YLF + + +YIGK+ +R RV S+ R T ++ R+ + + Sbjct: 9 VRELPEKPGIYLFKNKKGEI-IYIGKAKKLRKRVSSYFRASTHEQNGKTRELYQEIDDLE 67 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF----- 136 +I E ALLLEA LI + +P FN L+ + KR ++ + +F Sbjct: 68 FIVVPTEKEALLLEANLIYQHKPKFNVLLK----------DSKRYPYIFISDDEFPYISI 117 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGL---LGLEPLSRGRACFRSALKRCAGAC 193 +R + G + ++ ++ + D + + L + +GR CF LK C+ Sbjct: 118 TRIRDRKGFYYGPYTSITLVRNLLDLLQRIFKLRSCMDNRDCKKGRPCFLYHLKMCSAPL 177 Query: 194 CGKESHEEHALRLRQSLERL 213 G+ SH E+ ++R ++ L Sbjct: 178 AGEISHAEYQKQVRGFMDFL 197 >UniRef50_Q2NJ78 UvrABC system protein C n=3 Tax=Candidatus Phytoplasma RepID=UVRC_AYWBP Length = 589 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 14/172 (8%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE---AAMLRQSRRISWICTAG 87 LP PG YLF DT+ +Y+GK+ N++ RV S+ + A ++ +++ +I T Sbjct: 11 LPPNPGCYLFKNTKDTI-IYVGKAKNLKKRVQSYFTKRNNLKTAMLIEETQDFFYIITNN 69 Query: 88 EIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAPNLFGLF 146 E AL+LEA LIK P +N +L ++ +++ EK + ++ +FG + Sbjct: 70 EQEALILEANLIKTHTPKYNFKLLDDKTYPYIEITKEKHPQLKISRFKQIPPGKIIFGPY 129 Query: 147 ANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 N ++ + L+ + L C L+ + C + +C GAC GK Sbjct: 130 PNLKSTKETLKLLHLLYPLRRC-------QLASKKPCLHFHINQCLGACAGK 174 >UniRef50_Q601Y1 Excinuclease ABC subunit C n=4 Tax=Mycoplasma hyopneumoniae RepID=Q601Y1_MYCH2 Length = 516 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 79/131 (60%), Gaps = 9/131 (6%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA----AMLRQSRRISWICTA 86 LP + GVY F+ E +T+ LY+GK+ N++SR+ + + + ++R+++ I + Sbjct: 13 LPNQVGVYRFYDEKNTL-LYVGKAKNLKSRMNQYAKGATNSYKTEVLIRKTKEIKYDILQ 71 Query: 87 GEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS-RAPNLF- 143 E AL+LE ++I + QP++N +L+ ++ ++L EK++++ ++ S ++ N+F Sbjct: 72 NETEALILEKKIISKFQPIYNIKLKDDQNYPYIKLELEKKLNIELVYKISRSKKSKNIFF 131 Query: 144 -GLFANRRAAL 153 G F N+ +AL Sbjct: 132 YGPFLNKSSAL 142 >UniRef50_A4FBL9 UvrABC system protein C n=26 Tax=Actinomycetales RepID=UVRC_SACEN Length = 717 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 11/191 (5%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLR 75 P R +P PGVY FH +++ +Y+GK+ ++RSR+ S+ P M+ Sbjct: 4 PSTYRPAPGTIPDAPGVYRFH-DAEGRVIYVGKAKSLRSRLSSYFADLSGLHPRTRQMVT 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEKRVDVVYAKE 133 + + W E+ AL LE IKE P FN R R ++ + A+ L+E +Y Sbjct: 63 TATGVRWTVVGTEVEALQLEYSWIKEYDPRFNVRYRDDKSYPVLAVTLHED-FPRLYVTR 121 Query: 134 VDFSRAPNLFGLFANRRAALQALQTI--ADEQKLCYGLLGLEPLSRGRACFRSALKRCAG 191 + FG +A+ A + L + + C + GR C + +C+ Sbjct: 122 GPRRKGVRYFGPYAHAWAIRETLDMLLRVFPARTCSAGVFKRHSQIGRPCLLGYIGKCSA 181 Query: 192 ACCGKESHEEH 202 C G+ +EH Sbjct: 182 PCVGRVDADEH 192 >UniRef50_C6J7F4 UvrABC system protein C n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7F4_9BACL Length = 363 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 15/189 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQ 76 E + L LP PGVYL + + +Y+GKS N++ RV S+ R+ + Sbjct: 4 ERVEQQLRTLPAAPGVYLMKDAAGGV-IYVGKSKNLQQRVRSYFHASRHRSKKVERLAHN 62 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKE-VD 135 + + + T E AL+LE RLI+E +P++NK+++ L + + D ++ E VD Sbjct: 63 VKDLEILRTDTEFEALMLECRLIRELKPMYNKKMKSPHGYVYLVIRD--TDGIWDLEVVD 120 Query: 136 FSRAPNLFGLF----ANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAG 191 AP + ++ A+R + A++++ + ++ P G C +L C G Sbjct: 121 VPEAPGIRQVYGPYSASRHSVEAAVRSVREALRIACSRPRSAPT--GVPCLNHSLGLCLG 178 Query: 192 ACCGKESHE 200 AC G E+ E Sbjct: 179 ACLGGEAVE 187 >UniRef50_Q0BPX7 UvrABC system protein C n=43 Tax=Alphaproteobacteria RepID=UVRC_GRABC Length = 644 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 14/195 (7%) Query: 24 LRSFLNDLPTRPGVY-LFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAA-MLRQSR 78 + + L LP RPGVY + G+ + LY+GK+ +++ RV S+ R P+ M+ ++ Sbjct: 33 IEAMLKLLPDRPGVYRMLDGQGEA--LYVGKARSLKKRVASYTQIHRLPERLRRMVSETV 90 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV--DVVYAKEVDF 136 + + T E ALLLEA LIK +P FN LR ++ L L E ++ + Sbjct: 91 SMEIVTTHTEAEALLLEANLIKRLKPRFNIVLRDDKSYPWLMLTEDHAFPQIMKHRGAQT 150 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL--SRGRACFRSALKRCAGACC 194 +A + +G FA+ A QT+ Q++ + + +R R C ++RC+ C Sbjct: 151 RKAASYWGPFAS---AWAVNQTVTAMQRIFLLRSCSDSVFANRSRPCLLFQIRRCSAPCV 207 Query: 195 GKESHEEHALRLRQS 209 + S E++A + Q+ Sbjct: 208 DRISQEDYAELVDQA 222 >UniRef50_Q26GF0 Excinuclease ABC, C subunit n=5 Tax=cellular organisms RepID=Q26GF0_9BACT Length = 599 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 9/171 (5%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA----AMLRQSRRISWICTA 86 LPT PGVY ++ + D LY+GK+ N++ RV S+ ++ +M+++ I I Sbjct: 13 LPTTPGVYQYY-DKDHKLLYVGKAKNLKKRVSSYFTKNHDSYRIKSMVKKIVTIEHIVVE 71 Query: 87 GEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLF 146 E+ ALLLE LIK + P +N LR ++ L + ++R V+ +G F Sbjct: 72 TEMDALLLENSLIKNRNPRYNIMLRDDKTYPWLCIKKERFPRVFLTRRMIKDGSEYYGPF 131 Query: 147 ANRRAALQALQTIADEQKL--CYGLLGLEPLSRG--RACFRSALKRCAGAC 193 ++ + L I L C L + ++ G + C + CAG C Sbjct: 132 SSVKTVRALLDLIKGLYPLRTCKYDLSADKINAGKYKVCLEYHIGNCAGPC 182 >UniRef50_Q6MKS2 UvrABC system protein C n=1 Tax=Bdellovibrio bacteriovorus RepID=UVRC_BDEBA Length = 630 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 6/98 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQ 76 E +R + + PT+ GVYL +D + +YIGK+ N+R+RV S+ +P ++ Sbjct: 7 EEVRDKVKEFPTQSGVYLMKNTADKI-IYIGKAKNLRNRVRSYFNDSKDHSPKTRLLVSN 65 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNR 114 + +I T E+ A LLEA LIK+ +P +N RLR ++ Sbjct: 66 ICEVEYILTKTEVEAFLLEASLIKKHRPKYNIRLRDDK 103 >UniRef50_D2ML33 Excinuclease ABC, C subunit n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2ML33_9BACT Length = 583 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 17/178 (9%) Query: 48 PLYIGKSVNIRSRVLSHL-RTPDEAA---MLRQSRRISWICTAGEIGALLLEARLIKEQQ 103 P+YIGK+ N+R+RV+S+ R D ++R+ I ++ T GE AL +E LIK + Sbjct: 8 PVYIGKAKNLRARVMSYFQRGSDRGQIPYLVREVDSIDYVVTEGESEALFIENSLIKRHK 67 Query: 104 PLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQ 163 P +N RL+ ++ +L+L+ V + + R + L+ A+ + L++ + Sbjct: 68 PKYNIRLKDDKTFSSLRLS---VGERFPRLSRTRRIRDDGALYFGPFASGKFLKSTVN-- 122 Query: 164 KLCYGLLGLEPLSRG-------RACFRSALKRCAGACCGKESHEEHALRLRQSLERLR 214 L + L L ++ R C +K C+G C GK S E++ + Q+ LR Sbjct: 123 -LVHRLFPLRDCTQSKFERHSTRPCLNYFMKLCSGPCAGKISEEDYGELVSQATSFLR 179 >UniRef50_Q0RH00 DNA excision repair enzyme UvrABC; UvrC subunit n=1 Tax=Frankia alni ACN14a RepID=Q0RH00_FRAAA Length = 802 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 15/193 (7%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLS-----HLRTPDEAAMLR 75 P R +P PGVY F E + LY+GK+ N+R+R+ + H P M++ Sbjct: 4 PASYRPAPGSIPETPGVYRFRDEHGRV-LYVGKAKNLRARLANYFADLHTLHPRTQHMVQ 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQL--CALQLNEK--RVDVVYA 131 + + W + E+ AL LE IKE P FN R R ++ A+ L+E+ R+ V+ Sbjct: 63 AASAVDWTVVSTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPSLAVTLHEEFPRLQVMRG 122 Query: 132 KEVDFSRAPNLFGLFANRRAALQALQTI--ADEQKLCYGLLGLEPLSRGRACFRSALKRC 189 + R FG +A+ A + L + + C + GR C + RC Sbjct: 123 PKRKGVR---YFGPYAHAWAIRETLDLLLRVFPARTCSAGVFKRAGQVGRPCLLGYIDRC 179 Query: 190 AGACCGKESHEEH 202 + C G+ E H Sbjct: 180 SAPCVGRVDAETH 192 >UniRef50_D1BHL1 Excinuclease ABC subunit C n=16 Tax=Actinomycetales RepID=D1BHL1_SANKS Length = 703 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 15/193 (7%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLR 75 P R ++PT PGVY F + + +Y+GK+ N+R+R+ S+ + P M+ Sbjct: 4 PATYRPAPGEIPTTPGVYRFRDDHGRV-IYVGKAKNLRARLSSYFQDLAALHPRTQTMVT 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEK--RVDVVYA 131 + + W E+ AL LE IKE P FN + R ++ A+ + E R V+ Sbjct: 63 TASSVEWTVVGTEVEALALEYSWIKEYDPRFNVKYRDDKSYPYLAVTMGESVPRAQVMRG 122 Query: 132 KEVDFSRAPNLFGLFANRRAALQALQTI--ADEQKLCYGLLGLEPLSRGRACFRSALKRC 189 + +R FG FA+ A + L + + C + GR C + +C Sbjct: 123 SKRVGTR---YFGPFAHAWAIRETLDLLLRVFPIRTCSAGVYKRAQQSGRPCLLGYIDKC 179 Query: 190 AGACCGKESHEEH 202 A C + S + H Sbjct: 180 AAPCVERISKDAH 192 >UniRef50_D0WQL3 Putative DNA polymerase III, epsilon subunit n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WQL3_9ACTO Length = 589 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 10/168 (5%) Query: 35 PGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE----AAMLRQSRRISWICTAGEIG 90 PG+Y F G + + LY+G S N+R+RV + + A M + R T + Sbjct: 248 PGIYRFIGPAGDV-LYVGSSSNLRARVRQYFTAAETRKRMAEMTDLAERAEVDETPTVLE 306 Query: 91 ALLLEARLIKEQQPLFNKRLRR--NRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFAN 148 A +LE R I E P +N+R RR NR L +E + + A G F + Sbjct: 307 ARILELRQIAEFDPPYNRRSRRPDNRPWLTLT-DEAHPRLKVTASLAMEDAAAALGPFGS 365 Query: 149 RRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGACC 194 R+AA QA + +AD+ +L C L +P R C A+ RC+ C Sbjct: 366 RKAARQAAELVADDARLRTCTTRLPAKPSGRKAPCHLHAMGRCSAPCA 413 >UniRef50_Q7UPD6 Excinuclease ABC subunit C n=5 Tax=Planctomycetaceae RepID=Q7UPD6_RHOBA Length = 474 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 21/198 (10%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSH-LRTPDEAAM----LRQSRRISWICT 85 P PGVYL +S + +Y+GK+ N+RSR S+ L+ E A + I ++ T Sbjct: 52 FPQSPGVYLMK-DSAGVVIYVGKAKNLRSRASSYFLKAASEDARTADWIGDIADIDFVET 110 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK----RVDVVYAKEVDFSRAPN 141 E+ ALL+E+RLIK+ QP NK L+ ++ L + + RV+V S+ Sbjct: 111 ESEVDALLMESRLIKDIQPRNNKELKDDKSFPYLMITTREEFPRVEVTREPP---SKGVK 167 Query: 142 LFGLFANR---RAALQALQTIADEQKLCYGLL-GLEPLSRGRACFRSALKRCAGACCGKE 197 L+G F + R A+Q +Q I + + E R C +++ +C C + Sbjct: 168 LYGPFTSAGALRGAIQVMQRIFKFRTCSLDISESDERWQWFRPCLLASINQCTAPCNFRI 227 Query: 198 SHEEHALRLRQSLERLRV 215 S E++ R+ ++RL+ Sbjct: 228 SKEDY----RRDIKRLQT 241 >UniRef50_C7RHW1 Excinuclease ABC, C subunit n=4 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RHW1_ANAPD Length = 616 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 17/192 (8%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQ 76 + ++ L +LP PGVY+ D + +Y+GK+++++ RV + AM++ Sbjct: 4 KQIKEKLKELPDLPGVYIMRNAEDEI-IYVGKAISLKRRVRQYFDNNKNKGAKVLAMVKN 62 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVD 135 +I E+ AL+LE+ LIK+ +P +N LR ++Q +++ EK + ++V Sbjct: 63 IDHFEYIIVQNEVEALVLESNLIKKNRPRYNIVLRDDKQYPYIKICKEKYPRIKKVRQV- 121 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGL----LGLEPLSR-GRACFRSALKRCA 190 FG F + A A+ D L Y L + +R R C + +C Sbjct: 122 LKDGGRYFGPFPDAYAVNDAI----DLFHLYYPFRTCNLNFDKGARLDRPCLNYFIHKCK 177 Query: 191 GACCGKESHEEH 202 G C KE + + Sbjct: 178 GPCVDKEDEKRY 189 >UniRef50_Q2JCI3 UvrABC system protein C n=12 Tax=Actinomycetales RepID=UVRC_FRASC Length = 705 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 15/193 (7%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLS-----HLRTPDEAAMLR 75 P R +P PGVY F E + LY+GK+ N+R+R+ + H P M+ Sbjct: 4 PASYRPAPGSIPETPGVYRFRDEHGRV-LYVGKAKNLRARLANYFAELHTLHPRTQHMVS 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQL--CALQLNEK--RVDVVYA 131 + + W + E+ AL LE IK+ P FN R R ++ A+ L+E+ R+ V+ Sbjct: 63 SASSVDWTVVSTEVEALQLEYTWIKQFDPRFNVRYRDDKSYPSLAVTLHEEFPRLQVMRG 122 Query: 132 KEVDFSRAPNLFGLFANRRAALQALQTI--ADEQKLCYGLLGLEPLSRGRACFRSALKRC 189 + + FG +A+ A + L + + C G + GR C + RC Sbjct: 123 PK---RKGVRYFGPYAHAWAIRETLDLLLRVFPARTCSGGVFKRAAQVGRPCLLGYIDRC 179 Query: 190 AGACCGKESHEEH 202 + C G+ H Sbjct: 180 SAPCVGRVDAATH 192 >UniRef50_UPI0001788B47 Excinuclease ABC C subunit domain protein n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788B47 Length = 368 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 16/187 (8%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSR 78 +++ + +LP PGVYL T+ +Y+GKS +++ RV S+ +P +++ + Sbjct: 1 MKTKIQELPLSPGVYLMRDSRGTV-IYVGKSKSLKKRVQSYFYNNKSHSPKVKRLVQHVK 59 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR----VDVVYAKEV 134 + I T E A +LE RLI++ +P++N++++ + L +KR +++ + Sbjct: 60 DLEHIVTDTEFEAFMLECRLIQDIKPMYNRKMKNPLGYSYIVLRQKRDWRWLEITDTLDE 119 Query: 135 DFSRAPNLFGLFANRRAALQ-ALQTIADEQKLCYGLLGLEPL--SRGRACFRSALKRCAG 191 FG + R +L+ A+Q + ++ C P S C ++ C G Sbjct: 120 GTHEPSRFFGPYTASRHSLEHAVQKV---KECCKIACNHAPAASSANTPCLNYSIGLCLG 176 Query: 192 ACCGKES 198 C G ES Sbjct: 177 KCLGGES 183 >UniRef50_A7GIE5 GIY-YIG domain protein n=10 Tax=Clostridium RepID=A7GIE5_CLOBL Length = 365 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 30/188 (15%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQSRRISWICT 85 LP PG+Y+ +S + +Y+GKS N+R RV S+ + A +++ + +ICT Sbjct: 10 LPQSPGIYIMR-DSLSNIIYVGKSKNLRKRVYSYFIKQNNATSKIEKLIKNIKDFQYICT 68 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN--EKRVDVVYAKEVDFSRAPN-- 141 E+ ALLLE IK +P +N+ ++ + + +Q+N ++ + A E+ + N Sbjct: 69 DTELEALLLECTFIKCIKPQYNRLMKNHERYIYIQINIKDQYPIIKVASEI---KDDNYL 125 Query: 142 LFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR-------GRACFRSALKRCAGACC 194 +G F N L+ ++ GL + PL + C A+ +C G C Sbjct: 126 YYGPFINYNRILKFVE----------GLNEILPLIKCNNYLKHKSTCINYAIGKCKGPCI 175 Query: 195 GKESHEEH 202 S +++ Sbjct: 176 ENISSKQY 183 >UniRef50_A5FM03 UvrABC system protein C n=25 Tax=Bacteroidetes RepID=UVRC_FLAJ1 Length = 597 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 20/231 (8%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQSRRISWICTA 86 LP PGVY ++ + D LY+GK+ N++ RV S+ + A ++++ I I Sbjct: 13 LPDNPGVYQYY-DKDGKILYVGKAKNLKKRVSSYFNKIHDTAKTNVLVKKIVTIKHIVVP 71 Query: 87 GEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLF 146 E ALLLE LIK QP +N LR ++ + + ++ ++ FG + Sbjct: 72 TETDALLLENNLIKTLQPRYNVLLRDDKSYPWICIKKEPFSRIFLTRRMVKDGSEYFGPY 131 Query: 147 ANRRAALQALQTIADEQKL--CYGLLGLEPLSRG--RACFRSALKRCAGACCGKESHEEH 202 N + L I + L C L + G + C + C G C G E EE+ Sbjct: 132 TNFKMVYTILDLIKELYPLRTCNYDLSQSNIDSGKFKVCLEYHIGNCKGPCEGLEPLEEY 191 Query: 203 -----ALR------LRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNW 242 A+R ++SL+ + + + + +E + +++N+ Sbjct: 192 QRQVNAIREILKGNFKESLKDFKKLMNNYAQNLQFEEAQKIKEKIEVLENY 242 >UniRef50_B3WE47 UvrABC system protein C n=33 Tax=Bacilli RepID=UVRC_LACCB Length = 602 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 13/176 (7%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE---AAMLRQSRR 79 H+ L+ LP PG Y + + +Y+GK+ N+++RV S+ ++ + AAM+ Q Sbjct: 5 HIEHKLSLLPDLPGSYQMKDINGKI-IYVGKAKNLKNRVRSYFKSSHDGKVAAMVSQVAD 63 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRA 139 +I T+ + A LLE LI++ QP +N +L++ +++ +R + Sbjct: 64 FDFIVTSTDKEAFLLEITLIQKYQPYYNIKLKKGTGYPYIKITHERDPKIEITGTIRKDG 123 Query: 140 PNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGAC 193 FG + N AA + + I L C G +GR C + +C GAC Sbjct: 124 GYYFGPYPNVYAAQETMHFIQKVYPLRRCNGY-------QGRPCLYYHMGQCLGAC 172 >UniRef50_B6AR33 Excinuclease ABC, C subunit (UvrC) n=3 Tax=Leptospirillum RepID=B6AR33_9BACT Length = 632 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 88/188 (46%), Gaps = 16/188 (8%) Query: 21 PEH-LRSFLND----LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSH-----LRTPDE 70 P H L S + D LP PGVYL E+ + LY+GKS +++ RV S+ +R+ Sbjct: 9 PNHSLSSLVEDRLRTLPEEPGVYLMKSETGEV-LYVGKSRSLKDRVRSYFQETRVRSARI 67 Query: 71 AAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL--NEKRVDV 128 A ++ + R + I T E+ AL+LE LIK +P +N LR ++ L+ N+ + Sbjct: 68 ALLVSRVRDLEIIRTKTELDALILENTLIKRYRPRYNVLLRDDKTYPYLKFSWNDPFPRL 127 Query: 129 VYAKEVDFSRAPNL-FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALK 187 + V NL FG + N A L+ I L + L+ + R C +K Sbjct: 128 TITRRV--RNDGNLYFGPYPNPSAMKDTLRLIRRTFPLATCTIPLDQPTLERPCVEYQIK 185 Query: 188 RCAGACCG 195 RC G C Sbjct: 186 RCLGPCVA 193 >UniRef50_D1RJY2 Excinuclease ABC subunit C n=1 Tax=Legionella longbeachae D-4968 RepID=D1RJY2_LEGLO Length = 631 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 16/201 (7%) Query: 27 FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA----AMLRQSRRISW 82 FL LP PG+Y ES + LY+GK+ N++ RV S+ +++ Q I Sbjct: 21 FLAKLPNEPGIYRMLDESGAV-LYVGKAANLKKRVTSYFNKQKTGIKTRSLVTQIASIEI 79 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK----RVDVVYAKEVDFSR 138 T E ALLLE+ LIK +P +N LR ++ + L+ R++ +K+ S Sbjct: 80 SVTRSETEALLLESNLIKTLKPKYNVLLRDDKSYPYIHLSNHPQFPRIESYRSKKKPVS- 138 Query: 139 APNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 + FG + + + + TI K+ C +R R C + +KRC C Sbjct: 139 -GDFFGPYPSSGTVKETIVTIQKVFKIRNCRDSYF---NARSRPCLQYQIKRCTAPCVNY 194 Query: 197 ESHEEHALRLRQSLERLRVVC 217 S E++ ++ ++ L+ C Sbjct: 195 ISPEDYKRSVQDAMRFLQGKC 215 >UniRef50_D2L1M6 Excinuclease ABC, C subunit n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L1M6_9DELT Length = 695 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 11/132 (8%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRRISWI 83 + PT PGVYL G + LY+GK+ N+R+R+ S+ R T AA++ + + + Sbjct: 7 KNFPTSPGVYLMKGGKGKI-LYVGKAKNLRARLGSYFRGETGHTVKTAALVGRIEAVDVL 65 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVD---VVYAKEVDFSRAP 140 TA E ALLLE+ LIK+ +P +N L+ ++ +L+ KR D + + + V+ A Sbjct: 66 LTASEKEALLLESSLIKKHRPRYNVVLKDDKNYILFKLD-KRSDFPRLAFTRRVERDGA- 123 Query: 141 NLFGLFANRRAA 152 FG F + AA Sbjct: 124 TYFGPFTSAAAA 135 >UniRef50_Q4JVI8 UvrABC system protein C n=8 Tax=Corynebacterium RepID=UVRC_CORJK Length = 690 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 9/180 (5%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQSRRISWICT 85 +PT PGVY F + + +Y+GK+ N+R+R+ ++ + D+ AM++ + + W Sbjct: 13 IPTDPGVYTFRDAHERV-IYVGKAKNLRARLSNYFQDLDQLHPRTRAMVQSANHVQWTVV 71 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK-RVDVVYAKEVDFSRAPNLFG 144 + E+ AL LE IK P FN R ++ L ++ K ++ + + FG Sbjct: 72 SSELEALNLEYTWIKRFNPRFNVMYRDDKTYPMLAISVKEQIPRAFMYRGPRRKGVRYFG 131 Query: 145 LFANRRAALQALQTIAD--EQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 + A + L+++ + C + + GR C + RC+ C GK + E+H Sbjct: 132 PYPKAWAIRETLESLTRVFPIRTCSAGVYRRHEALGRPCLLGYIDRCSAPCVGKITPEDH 191 >UniRef50_C2CW30 Excinuclease ABC subunit C n=1 Tax=Gardnerella vaginalis ATCC 14019 RepID=C2CW30_GARVA Length = 749 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 57/241 (23%), Positives = 110/241 (45%), Gaps = 19/241 (7%) Query: 6 TSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL 65 S + F A+ + + + R +D+P +PGVY + E + +Y+GK+ ++R+R+ ++ Sbjct: 45 NSVKNNFGASLLGDTRDLFRPKTSDIPNQPGVYKWRDEKGKV-IYVGKAKSLRNRLSNYF 103 Query: 66 RT-----PDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCA 118 + P +M+ +R + W E+ AL LE IKE P FN + ++ A Sbjct: 104 QPLNQLHPRTQSMVLTARSLEWTVVNTELEALTLEYTWIKEFNPRFNVVFKDDKTYPYLA 163 Query: 119 LQLNEKRVDVVYAKEVDFSRAPNLFGLFAN----RRAALQALQTIADEQKLCYGLLGLEP 174 + +N+ V + + S++ FG +A R + L+T + C + ++ Sbjct: 164 VSVNDDFPRVWITRNRN-SKSTRYFGPYAKVWQLRHSLDSLLKTFP--VRTCRQSVFVKA 220 Query: 175 LSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMT 234 GR C +A+ +C+ C K + H R ++E+L V G + + EM Sbjct: 221 HKTGRPCLLAAIGKCSAPCIAKVDRKTH----RHNVEQLVGVLTGSIGDSYINDLTREMK 276 Query: 235 Q 235 + Sbjct: 277 E 277 >UniRef50_A5FIG6 DNA polymerase III, epsilon subunit n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FIG6_FLAJ1 Length = 459 Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 5/89 (5%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISWI 83 N+LP +PG+Y F+ ++ + +Y+GK+VN++ RV SH P LR IS+ Sbjct: 195 FNNLPEKPGIYYFYNQAKKV-IYVGKAVNLKKRVTSHFTGNNINPQRQHFLRDIYGISFE 253 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRR 112 A E+ ALLLE IK+ P +N+ L+R Sbjct: 254 ICATELMALLLECTEIKKLWPTYNRALKR 282 >UniRef50_C0QWI5 Excinuclease ABC, C subunit n=2 Tax=Brachyspira RepID=C0QWI5_BRAHW Length = 613 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 22/198 (11%) Query: 22 EHLRSFLND----LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE----AAM 73 + ++S+++D +P + GVY F +S + +YIGK+ +++ RV S+ ++ A+ Sbjct: 3 QEVKSYIHDKLKRIPDKSGVY-FMKDSKSEIIYIGKAKSLKKRVSSYFNNSNKDAKTTAL 61 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAK 132 + R I +I T E+ AL+LEA +I++ +P +N L+ + + + NE V+ A+ Sbjct: 62 VEHIRDIEYILTENEVEALILEAEMIRKHKPHYNILLKDQKSFPFIAITNEHFPRVIKAR 121 Query: 133 EV---DFSRA-PNLFGLFANRRAALQALQTIADEQKL--C-YGLLGLEPLSRG-RACFRS 184 V D +R +G + A ++ I D KL C Y PL R R C Sbjct: 122 NVIDKDNARKYKKYYGPYVAAERADNIVKFIIDNFKLRRCKYDF----PLKRAIRPCLYH 177 Query: 185 ALKRCAGACCGKESHEEH 202 + +C C E++ Sbjct: 178 HIGKCTAPCADLIKEEDY 195 >UniRef50_B3DRV5 UvrABC system protein C n=18 Tax=Bifidobacterium RepID=UVRC_BIFLD Length = 746 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 13/189 (6%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQSR 78 R +D+P +PGVY + + + +Y+GK+ N+R+R+ ++ + P M+ +R Sbjct: 9 FRPKTSDIPAKPGVYKWR-DGEGRVIYVGKAKNLRNRLTNYFQPLYLLHPRTQTMVLTAR 67 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEVDFS 137 + W A E+ +L LE IKE P FN + R ++ L ++ +R+ V+ Sbjct: 68 SLEWTVVATELESLTLEYTWIKEFDPRFNVQFRDDKTYPYLAVSTGERIPRVWVTRSRKR 127 Query: 138 RAPNLFGLFAN----RRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 R FG +A R + + L+T + C + + GR C +++ +C+ C Sbjct: 128 RDTRYFGPYAKVWELRHSLDRLLRTFP--VRTCTTNVFHKAQLTGRPCLFASIGKCSAPC 185 Query: 194 CGKESHEEH 202 + +EH Sbjct: 186 VNRIEADEH 194 >UniRef50_Q1LKN9 UvrABC system protein C n=32 Tax=Proteobacteria RepID=UVRC_RALME Length = 673 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 12/186 (6%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRI 80 R L +P PGVY + ++D LY+GK+ +++ RV S+ +P A M+ + RI Sbjct: 31 RPILARMPGLPGVYRYF-DADGNILYVGKARDLKKRVSSYFNKTQLSPRIAMMVAKIARI 89 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 E ALLLE LIK P +N R ++ L+L + + R Sbjct: 90 DTTVVRTEAEALLLENNLIKALAPRYNILFRDDKSYPFLRLTGHKFPRMAYYRGATDRKH 149 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL---SRGRACFRSALKRCAGACCGKE 197 FG F + A +++Q + QK+ + L E +R R C + RC G C G Sbjct: 150 QYFGPFPSAHAVRESMQIL---QKV-FQLRTCEDTVFNNRTRPCLLHQIHRCTGPCVGAI 205 Query: 198 SHEEHA 203 S +++A Sbjct: 206 SEDDYA 211 >UniRef50_B4RF25 UvrC, excinuclease ABC, C subunit n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RF25_PHEZH Length = 662 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 7/177 (3%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSH----LRTPDEAAMLRQSRRISWICTA 86 LP RPGVY GE D LY+GK+ +++ RVL + T A M+ +R + ++ T Sbjct: 64 LPDRPGVYRMIGE-DGEVLYVGKARSLKKRVLQYAQGRFHTQRIAHMVDLTRAMEFVTTR 122 Query: 87 GEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVD-FSRAPNLFGL 145 E ALLLE LIK+ +P FN LR ++ + + K S + FG Sbjct: 123 TETDALLLEINLIKQLKPRFNVLLRDDKSFPEIVIRRDHAAPQLRKHRGAHSIKGDYFGP 182 Query: 146 FANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 FA+ A + L T+ + L +R R C ++RC+ C G S E++ Sbjct: 183 FASAWAVNRTLNTL-QKAFLLRSCSDSVYETRTRPCMLHQIRRCSAPCTGLISLEDY 238 >UniRef50_C3JAE7 Excinuclease ABC subunit C n=2 Tax=Bacteria RepID=C3JAE7_9PORP Length = 604 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 9/201 (4%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQ----S 77 E ++ L LP PG Y ++ + +Y+GK+ N+R RV S+ + RQ Sbjct: 4 EEIKKILPTLPLSPGCYQYYNAEGEI-IYVGKAKNLRRRVSSYFQKEHTDRKTRQLVAQI 62 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 + +I A E ALLLE LIK QP +N L+ ++ ++ + + ++ Sbjct: 63 VDVKYIVVANESDALLLENNLIKTYQPKYNILLKDDKSYPSIVVTREPFPRIFVTRTIDP 122 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRA--CFRSALKRCAGAC 193 + +G + + A + I + K+ C E + RG+ C + +KRC C Sbjct: 123 SWGDYYGPYTSVAMAHGMVGIIREMYKVRTCRHRFTQEAIERGKYARCLQYHIKRCEAPC 182 Query: 194 CGKESHEEHALRLRQSLERLR 214 G S E++ + ++E L+ Sbjct: 183 EGLVSREDYLNNIAAAVELLK 203 >UniRef50_B6IZT9 UvrABC system protein C n=6 Tax=Coxiella burnetii RepID=UVRC_COXB2 Length = 609 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 86/187 (45%), Gaps = 18/187 (9%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSRRISW 82 +FL LPT GVY ++ +Y+GK+ N++ RV S+ R AM+ Q + I Sbjct: 8 AFLKTLPTGSGVYQMQ-DAQGKVIYVGKARNLQKRVSSYFRRQLDSKTQAMMAQVQSIQT 66 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR---- 138 T E ALLLEA IK+ +P +N LR ++ L L + +DF R Sbjct: 67 TITRNENEALLLEASFIKQFRPRYNVLLRDDKSYPYLYLATHQ----KFPRLDFYRGAKK 122 Query: 139 APN-LFGLFANRRAALQALQTIADEQKLCYGLLGLEPL--SRGRACFRSALKRCAGACCG 195 AP FG + N + + L I QKL E +R R C + +KRC C G Sbjct: 123 APGRYFGPYPNAGSVRENLALI---QKLFKLRQCSESFFKNRTRPCLQYQIKRCTAPCVG 179 Query: 196 KESHEEH 202 + +E+ Sbjct: 180 YVNEQEY 186 >UniRef50_A1ZTX2 Excinuclease ABC, C subunit n=4 Tax=Bacteroidetes RepID=A1ZTX2_9SPHI Length = 601 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 12/190 (6%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE-----AAMLRQS 77 + + L LPT GVY F +++ + LY+GK+ N+++RV S+ + +++Q Sbjct: 3 QIEATLKQLPTNAGVYKFFDKNNVL-LYVGKAKNLKNRVNSYFNKSAQHNRKTINLVKQI 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQL-CALQLNEKRVDVVYAKEVDF 136 + + E ALLLE LIK QP +N L+ ++ L NE +V ++++ Sbjct: 62 AHVDYTVVNSEFDALLLENNLIKNYQPKYNILLKDDKTYPYILITNEPFPKLVVTRKLEK 121 Query: 137 SRAPNLFGLFANRRAALQALQTIAD--EQKLCYGLLGLEPLSRG--RACFRSALKRCAGA 192 ++ +G F N +A ++ I + + C L E + + + C L C Sbjct: 122 NKG-RFYGPFTNLKAMNAIVELIRELYTIRTCNLHLSKENIQQNKFKLCLEYHLGNCQAP 180 Query: 193 CCGKESHEEH 202 C G +S E++ Sbjct: 181 CEGLQSEEDY 190 >UniRef50_Q4FPI1 UvrABC system protein C n=3 Tax=Candidatus Pelagibacter RepID=UVRC_PELUB Length = 611 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 13/189 (6%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE----AAMLRQSRRISWICTA 86 +P PGVY D + LY+GK+ N+ +R+ S++ + A ML Q+ ++ TA Sbjct: 18 IPKSPGVYRMLDHKDVI-LYVGKAKNLPNRLKSYVAEKNHIIRTARMLSQTFKLEITTTA 76 Query: 87 GEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSRAPNLFGL 145 E ALLLEA LIK+ +P FN L+ ++ + + N+ + V + FG Sbjct: 77 NESEALLLEANLIKKHKPKFNILLKDDKSFPFVFISNKDQWAQVTKHRGKKDKEGFYFGP 136 Query: 146 FANRRAA---LQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 FA+ A ++ LQ I + ++C +R R C +KRC+G C E++ Sbjct: 137 FASAGTANWTIKMLQKIF-QIRVCDDSTF---KNRKRPCILYQIKRCSGPCVDYIDKEDY 192 Query: 203 ALRLRQSLE 211 + Q+++ Sbjct: 193 KKSVDQAIQ 201 >UniRef50_D1VGT9 Excinuclease ABC, C subunit n=1 Tax=Frankia sp. EuI1c RepID=D1VGT9_9ACTO Length = 835 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 21/196 (10%) Query: 21 PEHLRSFLNDLPTRPGVYLF---HGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAA 72 P R +P PGVY F HG LY+GK+ N+R+R+ ++ P Sbjct: 4 PASYRPAPGSIPETPGVYRFRDPHGRV----LYVGKAKNLRARLNNYFTDVFALHPRTRT 59 Query: 73 MLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQL--CALQLNEK--RVDV 128 M+ + + W + E+ AL LE IKE P FN R R ++ A+ L E+ R+ V Sbjct: 60 MVTTASSVEWTVVSTEVEALALEYTWIKEYDPRFNVRYRDDKSYPSLAVTLQEEFPRLQV 119 Query: 129 VYAKEVDFSRAPNLFGLFANRRAALQALQTI--ADEQKLCYGLLGLEPLSRGRACFRSAL 186 + + R FG +A+ A + L + + C + GR C + Sbjct: 120 MRGPKRKGVR---YFGPYAHAWAIRETLDLLLRVFPARTCSTGVFKRAGQVGRPCLLGYI 176 Query: 187 KRCAGACCGKESHEEH 202 RC+ C G+ + +EH Sbjct: 177 DRCSAPCVGRVTPDEH 192 >UniRef50_B9M422 UvrABC system protein C n=8 Tax=Desulfuromonadales RepID=UVRC_GEOSF Length = 622 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 26/190 (13%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQSRRISW 82 + P+ PGVY+ +++ LY+GK+ ++R R+ S+ ++ ++ + I + Sbjct: 7 IGHFPSSPGVYIMK-DAEATVLYVGKARDLRKRIRSYFAASGDSRYQIRFLMARVTDIQF 65 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK----RVDVVYAKEVDFSR 138 I T E AL+LE LIK+ +P +N LR ++ +L+++ R+ ++ D +R Sbjct: 66 IVTDTEKEALILENTLIKKYRPKYNFNLRDDKTYFSLRMDMSSDFPRLSIIRKVTRDGAR 125 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLE--PLS----RGRACFRSALKRCAGA 192 + ++ RA L+ L Y L L P+ R R C LK+C+ Sbjct: 126 YFGPYSSASDARAVLKHL----------YKLFPLRHYPMETCRRRNRPCLFYQLKQCSAP 175 Query: 193 CCGKESHEEH 202 C GK S E++ Sbjct: 176 CHGKISREDY 185 >UniRef50_B5E2L2 UvrABC system protein C n=268 Tax=Bacilli RepID=UVRC_STRP4 Length = 615 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 4/105 (3%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA---AMLRQSRRI 80 ++S L LPT PG Y+ H + + +Y+GK+ N+R+RV S+ R + A++ + Sbjct: 5 IKSKLELLPTSPGCYI-HKDKNGTIIYVGKAKNLRNRVRSYFRGSHDTKTEALVSEIVDF 63 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR 125 +I T I ALLLE LIKE +P +N L+ ++ +++ +R Sbjct: 64 EFIVTESNIEALLLEINLIKENKPKYNIMLKDDKSYPFIKITNER 108 >UniRef50_C7HUD8 UvrABC system, C protein n=2 Tax=Anaerococcus RepID=C7HUD8_9FIRM Length = 615 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 17/191 (8%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQS 77 ++ L +LP PGVY+ D + +Y+GK++N++ RV + +M+ Sbjct: 4 QIKEKLKELPDLPGVYIMRNSQDEI-IYVGKAINLKKRVSQYFDNNKNKGRKVLSMVSHI 62 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDF 136 +I E+ AL+LE+ LIK+ +P +N LR ++Q +++ NEK + + V Sbjct: 63 NHFEYIIVENEVEALVLESNLIKKNRPKYNIVLRDDKQYPYIKITNEKFPRIQKVRNVKK 122 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGL----LGLEPLSR-GRACFRSALKRCAG 191 + +G + + A ++ + Y + L + + R C + RC Sbjct: 123 DKGY-YYGPYPDAYAVNDVIELFH----ILYPIRTCNLNFDKGQQLDRPCLNYYIDRCKA 177 Query: 192 ACCGKESHEEH 202 C GK +E+ Sbjct: 178 PCVGKGDEKEY 188 >UniRef50_Q2RS75 UvrABC system protein C n=13 Tax=Alphaproteobacteria RepID=UVRC_RHORT Length = 639 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 21/193 (10%) Query: 22 EHLRSFLNDLPTRPGVY-LFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAA-MLRQ 76 E +R+ L +P+ PGVY + G+ D LY+GK+ N++ RV+++ R P M+ Sbjct: 31 EAIRAALRTMPSSPGVYRMIDGKGDV--LYVGKARNLKRRVINYTQPHRLPVRIQRMIAA 88 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 + + + T E ALLLE+ LIK+ +P +N LR ++ +++ D + + V F Sbjct: 89 TLTMEVLTTHTEAEALLLESNLIKKLKPRYNILLRDDKSFPYIEITS---DHAFPRIVKF 145 Query: 137 ----SRAPNLFGLFANRRA---ALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRC 189 + FG FA+ A L ALQ + + SR R C +KRC Sbjct: 146 RGTLRKGGEYFGPFASAGAVTSTLTALQKTFLLRTCADNVFA----SRSRPCLLFQIKRC 201 Query: 190 AGACCGKESHEEH 202 A C + + ++ Sbjct: 202 AAPCVDRVAEADY 214 >UniRef50_Q0A8X6 UvrABC system protein C n=19 Tax=Gammaproteobacteria RepID=UVRC_ALHEH Length = 611 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 13/198 (6%) Query: 21 PEHLRSFLNDLPTRPGVY-LFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLR 75 P ++F+ L RPGVY + G + LY+GK+ N++ RV S+ ++A ML Sbjct: 7 PFDPKAFVRSLTQRPGVYRMVDGRGEV--LYVGKARNLKKRVASYFTRSRKSARIELMLT 64 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVD 135 Q + I T E AL+LE LIKE +P +N LR ++ + L+ + + Sbjct: 65 QVQDIQVTVTHTEAEALILENTLIKELRPRYNVLLRDDKSYPWIYLSSHQDFPRLSFHRG 124 Query: 136 FSRAPNL-FGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGA 192 + P FG F + A + L T+ ++ C +R R C + +KRC Sbjct: 125 ARKGPGRWFGPFPSGHAVRETLNTLQKVFRIRQCQDSFF---SNRSRPCLQHQIKRCTAP 181 Query: 193 CCGKESHEEHALRLRQSL 210 C G S E + +R ++ Sbjct: 182 CVGYISREAYQEDVRHAV 199 >UniRef50_A5M6P1 Excinuclease ABC subunit C n=1 Tax=Streptococcus pneumoniae SP14-BS69 RepID=A5M6P1_STRPN Length = 553 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 4/105 (3%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA---AMLRQSRRI 80 ++S L LPT PG Y+ H + + +Y+GK+ N+R+RV S+ R + A++ + Sbjct: 5 IKSKLELLPTSPGCYI-HKDKNGTIIYVGKAKNLRNRVRSYFRGSHDTKTEALVSEIVDF 63 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR 125 +I T I ALLLE LIKE +P +N L+ ++ +++ +R Sbjct: 64 EFIVTESNIEALLLEINLIKENKPKYNIMLKDDKSYPFIKITNER 108 >UniRef50_C0X5Y6 Excision endonuclease subunit UvrC n=22 Tax=Enterococcus faecalis RepID=C0X5Y6_ENTFA Length = 320 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 83/147 (56%), Gaps = 12/147 (8%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQ 76 E+L+ + LP PGVYL +DT+ +Y+GK+ +++RV S+ ++ + +++Q Sbjct: 3 EYLKEKAHQLPLTPGVYLMKDATDTI-IYVGKAKKLKNRVSSYFINSNQHSRKTMRLVKQ 61 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEKRVDVVYAKEV 134 + T E+ ALLLE +LI++ +P +N+++ Q ++ +NE+++++ K + Sbjct: 62 IIDFDVLHTDTELDALLLECQLIQQYRPRYNRQMNAYEQYSYVSVAVNERQLEI---KLL 118 Query: 135 DFSRAPNLFGLFANRRAALQALQTIAD 161 + N FG ++ RR L L+ I D Sbjct: 119 NIPTKENCFGPYSIRR-KLNRLKIILD 144 >UniRef50_D0WMS6 Excinuclease ABC subunit C n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WMS6_9ACTO Length = 734 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 13/192 (6%) Query: 21 PEHLRSFLNDLPTRPGVYLF-HGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AML 74 P R +PT+PGVY F GE LY+GK+ N+R+R+ S+ + P AM+ Sbjct: 4 PRQYRPEQGAIPTQPGVYRFLDGEGRV--LYVGKAKNLRARLSSYFQDPAGLSDRIRAMV 61 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEKRVDVVYAK 132 + + W+ E+ AL LE IKE P FN R N+ A+ L E+ V+ Sbjct: 62 YTAEAVKWVVVGSEVEALTLEYLWIKEFTPTFNVVFRDNKSYPYLAVSLGEE-YPRVWVT 120 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIAD--EQKLCYGLLGLEPLSRGRACFRSALKRCA 190 + + G + A + L + + C + GR C + +C+ Sbjct: 121 RQEHRKGTRYLGPYTKVWAIRETLDQLLSVFPMRSCTKSQFNQARRLGRPCLFGHIGKCS 180 Query: 191 GACCGKESHEEH 202 C + + EEH Sbjct: 181 APCIERVTPEEH 192 >UniRef50_C0ZZE8 UvrABC system protein C n=14 Tax=Actinomycetales RepID=UVRC_RHOE4 Length = 730 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 17/194 (8%) Query: 21 PEHLRSFLNDLPTRPGVYLF---HGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAA 72 P R +P PGVY F HG +Y+GK+ ++RSR+ S+ P Sbjct: 4 PSTYRPATGTIPAAPGVYKFRDPHGRV----IYVGKAKSLRSRLNSYFADVTTLHPRTRQ 59 Query: 73 MLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEKRVDVVY 130 M+ + + W + E+ AL LE IKE P FN R R ++ + A+ LNE+ ++ Sbjct: 60 MVTTAGSVEWTVVSTEVEALQLEYNWIKEFDPRFNVRYRDDKTYPVLAVTLNEE-FPRLF 118 Query: 131 AKEVDFSRAPNLFGLFANRRAALQALQTI--ADEQKLCYGLLGLEPLSRGRACFRSALKR 188 + FG +++ A + L + + C + GR C + + Sbjct: 119 VYRGPRRKGVRYFGPYSHAWAIRETLDLLLRVFPARTCSSGVFKRHNQIGRPCLLGYIDK 178 Query: 189 CAGACCGKESHEEH 202 C+ C G+ S EEH Sbjct: 179 CSAPCVGRVSAEEH 192 >UniRef50_Q14NX3 Putative uvrc protein excinuclease abc subunit c n=1 Tax=Spiroplasma citri RepID=Q14NX3_SPICI Length = 593 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 15/174 (8%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSRRISWICTAG 87 LP +PG YLF+ + LY+GK+ N+RSRV S+ ++++ R+ I T Sbjct: 14 LPAKPGCYLFYNNYHQV-LYVGKAKNLRSRVSSYFNKVYNYKTTRLVQEIVRLETIITKT 72 Query: 88 EIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV--DFSRAPNLFG 144 E AL+LE LIK+ +P +N L ++ + + EK +Y + + ++R F Sbjct: 73 EKEALILEHNLIKQYKPKYNILLNDDKHYPYIVITKEKDPQYLYVRNIHQKYARYYGPFP 132 Query: 145 LFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 ++ R ++ L+ + ++ C G L G+ C + +C+GAC S Sbjct: 133 EGSHAREIIKVLERLYPLRR-CKGNL-------GKPCLYYHINQCSGACVKTVS 178 >UniRef50_P47448 UvrABC system protein C n=2 Tax=Mycoplasma RepID=UVRC_MYCGE Length = 597 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 68/263 (25%), Positives = 117/263 (44%), Gaps = 30/263 (11%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR--TPDEAAMLR-QSRR 79 +L+ L P +PG YL+ +S+ LY+GK+ NI +RV + + P + +L Q Sbjct: 4 NLKQKLKTAPKKPGCYLW-KDSNGKVLYVGKASNIFNRVHQYFQKNNPYKTQLLSSQISD 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEVDFSR 138 + + E AL LEA+LI + QP FN L++N + + K+ + A++ + Sbjct: 63 VDFFILKDENDALNLEAKLINQYQPRFNLVLKQNNGYLYFYITKAKKPTLELARKYQI-K 121 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL------SRGRACFRSALKRCAGA 192 FG FA+ + L+ + + LL L PL + CF + C G Sbjct: 122 TTKCFGPFASSKFKLREIHDL---------LLKLFPLRKCAPHQKNHPCFYFQMGLCMGQ 172 Query: 193 CC---GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWL-GAV 248 C KE +++ + Q VV + A +++ + ++ Q +L L AV Sbjct: 173 CMQTDTKEKYQQVISNIEQFFNDPSVVINYLKAA---EKKASDNQEFEKAQQFLTLQKAV 229 Query: 249 NSLEEA--TTLIRTPAGFDHDGY 269 L + TT+I+ + D GY Sbjct: 230 LELTKTHHTTIIKQKSSHDFIGY 252 >UniRef50_A3NXK5 UvrABC system protein C n=59 Tax=Proteobacteria RepID=UVRC_BURP0 Length = 747 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 84/188 (44%), Gaps = 16/188 (8%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRI 80 + L LP PGVY ++ D + LY+GK+ +++ RV S+ +P A M+ + RI Sbjct: 14 KPILAQLPHLPGVYRYYDAQDAV-LYVGKARDLKKRVSSYFTKTQLSPRIAMMITRIARI 72 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVD--VVYAKEVDFSR 138 T E ALLLE LIK P +N R ++ L+L R Y VD + Sbjct: 73 ETTVTRSEAEALLLENNLIKALAPRYNILFRDDKSYPYLKLTGHRFPRMAYYRGAVD--K 130 Query: 139 APNLFGLFANR---RAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 FG F + R ++Q LQ + + + +R R C + RC+ C G Sbjct: 131 KNQYFGPFPSAWAVRESIQILQRVFQLRTCEDSVFN----NRTRPCLLHQIGRCSAPCVG 186 Query: 196 KESHEEHA 203 E++A Sbjct: 187 AIGEEDYA 194 >UniRef50_D2LI59 Excinuclease ABC, C subunit n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LI59_RHOVA Length = 689 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/191 (29%), Positives = 92/191 (48%), Gaps = 11/191 (5%) Query: 11 EFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---- 66 E A+A P+ + ++ L T PGVY + + +Y+GK+ N+++RV ++ R Sbjct: 17 EDAASAPETGPQVIHRYVKHLGTGPGVYRMVDLAGEV-IYVGKARNLKNRVQNYTRMGGH 75 Query: 67 TPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV 126 T AAM+R + + ++ T E ALLLEA LIK +P +N R ++ + + + Sbjct: 76 TNRIAAMIRATATMEFVNTRTEAEALLLEANLIKRFKPRYNVSFRDDKSFPYIVIRRDQE 135 Query: 127 DVVYAKEVDF-SRAPNLFGLFANRRAALQALQTI--ADEQKLCYGLLGLEPLSRGRACFR 183 AK + + FG FA+ A + + T+ A + C + SR R C Sbjct: 136 AAQIAKHRGARTVKGDYFGPFASAGAVNRTINTLQRAFLLRTCADSV---YDSRTRPCLL 192 Query: 184 SALKRCAGACC 194 +KRCAG C Sbjct: 193 FQIKRCAGPCT 203 >UniRef50_C5BV40 UvrABC system protein C n=16 Tax=Actinomycetales RepID=UVRC_BEUC1 Length = 693 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 21/196 (10%) Query: 21 PEHLRSFLNDLPTRPGVYLF---HGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAA 72 P R ++P PGVY F HG +Y+GK+ ++RSR+ S+ + P Sbjct: 4 PTTYRPRPGEIPDAPGVYRFRDPHGRV----VYVGKAKSLRSRLSSYFQDLSALHPRTQQ 59 Query: 73 MLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEK--RVDV 128 M+ + + W E+ AL LE IKE P FN + R ++ A+ + E+ RV V Sbjct: 60 MVTTASSVEWTVVGTEVEALQLEYSWIKEFDPRFNVKYRDDKSYPYLAVTMGEEVPRVQV 119 Query: 129 VYAKEVDFSRAPNLFGLFANRRAALQALQTI--ADEQKLCYGLLGLEPLSRGRACFRSAL 186 + + +R FG + + A + + + + C + + GR C + Sbjct: 120 MRGAKRKGTR---YFGPYGHAWAIRETVDLLLRVFPVRTCSSGVYKRAAASGRPCLLGYI 176 Query: 187 KRCAGACCGKESHEEH 202 +C+ C G+ S E+H Sbjct: 177 DKCSAPCVGRISVEDH 192 >UniRef50_C0QET6 UvrABC system protein C n=2 Tax=Desulfobacteraceae RepID=UVRC_DESAH Length = 606 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 18/183 (9%) Query: 32 PTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSRRISWICTA 86 P PGVYL + T+ +Y+GK++N++ R+ S+ +L++ I TA Sbjct: 13 PQNPGVYLMKDKRGTI-IYVGKALNLKKRLASYFARETGHDMKTGVLLKKVVDFDLIVTA 71 Query: 87 GEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR----VDVVYAKEVDFSRAPNL 142 E AL+LE+ LIK+ P +N L+ + L+++ + ++VV +++ A Sbjct: 72 TEHEALILESTLIKKHSPRYNVILKDGKSYPCLRIDTSKPFPALEVV--RKIGDDNAV-Y 128 Query: 143 FGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG +++ ++ ++ + KL C + + +R R C + C GACC + S + Sbjct: 129 FGPYSSVQSVRSTIKQVNKIFKLRKCRDV---QFANRTRPCLNYQINACLGACCNRVSRQ 185 Query: 201 EHA 203 E+A Sbjct: 186 EYA 188 >UniRef50_UPI0001977D11 excinuclease ABC subunit C n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI0001977D11 Length = 627 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 58/287 (20%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE------------AAMLR 75 L +LPT+PG+Y + + D + LY+GK+ N+++R+ S+ ++ A M+ Sbjct: 22 LQNLPTQPGIYQYFDKDDNL-LYVGKAKNLKNRIKSYFSIHNDIITPKANLSQRIALMVS 80 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVD 135 Q +I + T + AL+LE LIK +P +N LR ++K +Y +D Sbjct: 81 QVAKIHTLLTQSQEDALILENSLIKSLKPKYNILLR----------DDKTYPYIY---ID 127 Query: 136 FSRAPNLFGLFANRRAALQALQT------IADEQKLCYGLLGLEPLSRGRACFRSA---- 185 S F F R ALQ+ ++ ++L L PL + ++C + Sbjct: 128 TSAT---FPRFEITRKALQSKHIEYFGPFVSGARELLDSLYDALPLVQKKSCLKGKKACI 184 Query: 186 ---LKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNW 242 + +C C K S ++A + Q+ + +G + + E ++ H +Q Sbjct: 185 FHQIHKCPAPCENKISQSQYAEYITQA----KAFIDDRKGLIEILESKMQILS-HNLQFE 239 Query: 243 LWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPA 289 + +++ TL +T + D ++SG+Y+I LD A Sbjct: 240 EAAKIRDRIQKLKTL-KTQSIID----------IMSGDYDIFLLDSA 275 >UniRef50_B0K791 UvrABC system protein C n=11 Tax=Thermoanaerobacterales RepID=UVRC_THEP3 Length = 615 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/195 (23%), Positives = 91/195 (46%), Gaps = 24/195 (12%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQSRRISWICT 85 LP +PGVY+ +S + +Y+GK+V +++RV + + P ML +I T Sbjct: 10 LPEKPGVYIMKDKSGKI-IYVGKAVVLKNRVRQYFQNKEKQLPKVKVMLSHVEDFEYIVT 68 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLR--RNRQLCALQLNEKRVDVVYAKEVDFSRAPNLF 143 E+ AL+LE LIK+ +P +N L+ +N + +NE+ +++ + ++ P+ Sbjct: 69 DTELEALMLECNLIKKYKPKYNVLLKDDKNYPYIKVTVNEEYPRIMFTRRIE----PDGA 124 Query: 144 GLFANRRAALQALQTIADEQKLCYGLLGL--------EPLSRGRACFRSALKRCAGACCG 195 F +A +TI KL + + + + + R C + C+ C Sbjct: 125 KYFGPYSSAFAVRETI----KLVRKMFPIRTCNKNIEKDMGKVRECLYYHIGLCSAPCTN 180 Query: 196 KESHEEHALRLRQSL 210 K + E++ + Q++ Sbjct: 181 KINKEDYIKLVDQAV 195 >UniRef50_Q04EZ7 UvrABC system protein C n=42 Tax=Lactobacillales RepID=UVRC_OENOB Length = 607 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 21/181 (11%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSRRISWICTAG 87 LP++PG Y ++ + +Y+GK+ N+++RV S+ + T A ++ +I T Sbjct: 13 LPSQPGSYQMKDKNGKI-IYVGKAKNLKNRVRSYFKAEHTGKTAELVANIHDFEFIVTNS 71 Query: 88 EIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSRAPNLFGLF 146 + A LLE LIK +P FN RL+ + +++ NE+ ++ A + FG + Sbjct: 72 DKEAFLLENTLIKRYRPYFNIRLKFSGSYPYIEITNERDPRLILANTLKHDHG-TYFGPY 130 Query: 147 ANRRAALQALQTIADEQKLCYGLLGLEPLSR-----GRACFRSALKRCAGACCGKESHEE 201 N AA + L + ++ Y PL R GR C ++ +C GAC EE Sbjct: 131 PNVYAASETLHFL----EMTY------PLRRCNGYQGRPCLYYSMGQCLGACWRTVPQEE 180 Query: 202 H 202 + Sbjct: 181 Y 181 >UniRef50_D0RRP8 Excinuclease ABC subunit C n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RRP8_9RICK Length = 612 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 17/179 (9%) Query: 35 PGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQSRRISWICTAGEIG 90 PGVY E + + +Y+GK+ N+ +R+ ++ + + M+ + RI I T E Sbjct: 22 PGVYQVFDEKNKI-IYVGKAKNLPNRLSNYSSSSTQPIRTERMIASTNRIDTISTLNESE 80 Query: 91 ALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPN----LFGLF 146 ALLLEA LIK+ +P +N L+ ++ +Q+ R Y + F N FG F Sbjct: 81 ALLLEANLIKKNKPRYNVLLKDDKSFPYIQI---RSSHDYPQITKFRGKHNDKDIYFGPF 137 Query: 147 ANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA--CFRSALKRCAGACCGKESHEEHA 203 A+ +A ++ + QK+ + + +GR+ C +KRC+G C G+ + E++ Sbjct: 138 ASIASANWTIKML---QKVFQIRVCDDNTFKGRSRPCILYQIKRCSGPCTGEITKSEYS 193 >UniRef50_C3XLG8 Excinuclease abc subunit c n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XLG8_9HELI Length = 618 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 23/205 (11%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-TPDEA--------- 71 ++L L +P GVY + + LY+GK+ N++ R+ S+ R TP+ A Sbjct: 10 QNLLETLKKIPNSSGVYHYFDTQGKL-LYVGKAKNLKHRIKSYFRFTPNLAPAPNLSPRI 68 Query: 72 -AMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ---LCALQLNEKRVD 127 M+ Q + +I E AL+LE LIK+ +P +N LR ++ LC + L E Sbjct: 69 TQMVSQIAHLRYIVVENENDALILENSLIKQLKPKYNVLLRDDKTYPYLC-VDLQEDFPR 127 Query: 128 VVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRG-RACFRSAL 186 ++ +++ + FG F++ A L +I + + L E G +AC + Sbjct: 128 ILLTRKIFKKQGLRYFGPFSS--GARDLLDSIYE----IFPLAQKESCKNGKKACLFYQI 181 Query: 187 KRCAGACCGKESHEEHALRLRQSLE 211 RC C GK S +++A L+ +LE Sbjct: 182 HRCLAPCEGKISTKDYAKILQNALE 206 >UniRef50_D1PLG8 Excinuclease ABC subunit C n=3 Tax=Ruminococcaceae RepID=D1PLG8_9FIRM Length = 616 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 21/197 (10%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR--TPDEAA---MLRQSRRISWICT 85 LP PGVY+ +SDT+ +YIGK+ +++RV + R P +A M+ + I Sbjct: 13 LPLLPGVYIIRDKSDTI-IYIGKAKRLKTRVSQYFREGVPHDAKVTQMIAHAFTFDVIVC 71 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK---RVDVVYAKEVDFSRAPNL 142 E AL+LEA IK P +N L+ ++ +++ + R+ K+ D + Sbjct: 72 QSEFEALVLEASQIKAHTPKYNILLKDDKGYSYVKVTKGPWPRISAALQKDDD---GADY 128 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLE-----PLSRGRACFRSALKRCAGACCGKE 197 G F + A + ++ D C+ L +GR C + + +C C GK Sbjct: 129 IGPFTSSFAVREMVEMAQD----CFLLPRCNREFPRDFGKGRPCLNAHIGKCMAVCSGKI 184 Query: 198 SHEEHALRLRQSLERLR 214 S E + ++ +L +R Sbjct: 185 SCEAYNEAVQGALRMIR 201 >UniRef50_A1SLE5 DNA polymerase III, epsilon subunit n=5 Tax=Actinomycetales RepID=A1SLE5_NOCSJ Length = 601 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 14/194 (7%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRISWIC 84 R LP PGVYLF E + LY+G S ++R+RV S+ + + + + I+ + Sbjct: 222 RHLAEGLPHAPGVYLFRDEQAQV-LYVGTSRDLRTRVRSYFTASETRSRMGEMVGIATVV 280 Query: 85 TAGE----IGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK---RVDVVYAKEVDFS 137 A E + A + E RLI E +P +N+R R ++ ++L + R+ +V D + Sbjct: 281 DAIECATALEAEVRELRLIAEHKPKYNRRSRNPSKVHFIKLTREPWPRLSLVRRVLDDDA 340 Query: 138 RAPNLFGLFANRRAALQALQTIADE--QKLCYGLLGLEPLSRGRA-CFRSALKRCAGACC 194 + G F++++ A + L + + + C L +P + GRA C + + RC C Sbjct: 341 ---DYLGPFSSKKTAEKCLAALHETFPVRQCTDRLPGDPAAAGRAPCVLAEMGRCLAPCD 397 Query: 195 GKESHEEHALRLRQ 208 G H +A + Q Sbjct: 398 GSVDHATYAAVVHQ 411 >UniRef50_B3EU62 Excinuclease ABC, C subunit n=2 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3EU62_AMOA5 Length = 596 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 10/190 (5%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQSRRISW 82 + LP +PGVY F+ + + +Y+GK+ +++ RV S+ + M+ + IS+ Sbjct: 11 IGKLPNQPGVYFFYNKQQQI-IYVGKAKDLKKRVSSYFNKNQQDNLKTRRMVEEIAAISF 69 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNL 142 E ALLLE LIK QP +N L+ ++ + + +R V ++ Sbjct: 70 TIVNSEYEALLLENNLIKRFQPRYNILLKDDKSFPYICITRERFPKVITTRQPGAKLGQY 129 Query: 143 FGLFANRRAALQALQTIADEQKL--C-YGLLGLEPLS-RGRACFRSALKRCAGACCGKES 198 +G F + + Q L I L C Y LL + + C + C G C G ++ Sbjct: 130 YGPFTDLKNMYQILDLIKSLYTLRTCNYNLLEENICKHKFKVCLEYHIGHCKGPCEGLQT 189 Query: 199 HEEHALRLRQ 208 E + ++Q Sbjct: 190 EEAYNQDIQQ 199 >UniRef50_Q6SI31 Excinuclease ABC, C subunit n=1 Tax=uncultured marine bacterium 105 RepID=Q6SI31_9BACT Length = 622 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 93/211 (44%), Gaps = 35/211 (16%) Query: 22 EHLRSFLNDLPTRPGVYL-FHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQ 76 + L+ ++ LP +PGVYL F+G DT +Y+GK+ +R RV S+L +P A+L Sbjct: 4 QDLKVQISTLPEQPGVYLYFNGAGDT--IYVGKASVLRDRVRSYLSAHGASPRIDALLDD 61 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL--NEKRVDVVYAKEV 134 + I T AL LE LIK + P +N LR ++ LQL NE V+ ++ V Sbjct: 62 VESLEIIVTDSVAEALALENNLIKHRAPKYNVLLRDDKNYPYLQLTTNEAFPRVLVSRRV 121 Query: 135 D----FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS------RGRACFRS 184 F P L A R+ L L + L G+ + R R C Sbjct: 122 QRDGAFYAGPFLPTALA-RKTML-----------LTHRLFGIRSCNEVITGRRDRPCLEY 169 Query: 185 ALKRCAGAC----CGKESHEEHALRLRQSLE 211 +KRC C C +E + E R LE Sbjct: 170 DIKRCLAPCVANVCSQERYAEAVEHTRMFLE 200 >UniRef50_C4XSA3 UvrABC system protein C n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XSA3_DESMR Length = 691 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 6/101 (5%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRRISWI 83 + P PGVYL G + LY+GK+ N+RSR+ S+ R T AA++ + + + Sbjct: 7 KNFPMSPGVYLMKGARGKI-LYVGKAKNLRSRLSSYFRNDAGLTVKTAALVAKVEGVDVL 65 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK 124 TA E ALLLE+ LIK+ +P +N L+ ++ +L+++ Sbjct: 66 LTASEKEALLLESSLIKKHRPRYNIVLKDDKNYILFKLDKR 106 >UniRef50_B2JFL2 Excinuclease ABC, C subunit n=2 Tax=Burkholderia RepID=B2JFL2_BURP8 Length = 740 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 12/186 (6%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSH----LRTPDEAAMLRQSRRI 80 + L LP PGVY ++ E + LY+GK+ +++ RV S+ L +P A M+ + +I Sbjct: 41 KKVLRQLPHMPGVYRYYDEQGAV-LYVGKARDLKKRVSSYFTKTLLSPRIAMMVSRIAKI 99 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 T E ALLLE LIK P +N R ++ L+L + + + Sbjct: 100 ETTVTRSEAEALLLENNLIKALAPRYNILFRDDKSYPYLKLTGHQFPRMAYYRGSVDKKN 159 Query: 141 NLFGLFANR---RAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG F + R ++Q LQ + + + +R R C + RC C G Sbjct: 160 QYFGPFPSAWAVRESIQILQRVFQLRTCEDSVFN----NRTRPCLLHQIGRCTAPCVGAV 215 Query: 198 SHEEHA 203 + E++A Sbjct: 216 TEEDYA 221 >UniRef50_C7PV18 DNA polymerase III, epsilon subunit n=3 Tax=Sphingobacteriales RepID=C7PV18_CHIPD Length = 456 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 17/193 (8%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQSRRISWICT 85 LP PGVY FH + + +Y+GK+ NIR RV SH T + A LR IS T Sbjct: 194 LPGTPGVYYFHDQKGKV-VYVGKAKNIRKRVNSHF-TGNSAGRKRQEFLRNIYSISHEVT 251 Query: 86 AGEIGALLLEARLIKEQQPLFN---KRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNL 142 E+ A +LE+ IK P++N K + + E + +V K +S + Sbjct: 252 GTELMAHILESVEIKRLWPVYNYSQKYIEFKYGFYCFEDQEGYLRLVIEKRRKYSAPLHS 311 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGR-ACFRSALKRCAGACCGKESHEE 201 F L Q L+ + E LC L L+ +G+ AC C GAC KE+ E Sbjct: 312 FPLLVQGH---QMLRGLIREFDLCPRLCFLQ---KGQGACSPIPDHTCRGACEKKETSET 365 Query: 202 HALRLRQSLERLR 214 + LR++ ++ ++ Sbjct: 366 YNLRVKAAIIHMQ 378 >UniRef50_A0Q5Q7 UvrABC system protein C n=18 Tax=Francisella RepID=UVRC_FRATN Length = 612 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 31/200 (15%) Query: 24 LRSFLNDLPTRPGVYLF---HGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQ 76 L+SFL +L T GVY HGE +Y+GK+ N+++RV S+ + M+ Q Sbjct: 11 LKSFLANLTTHSGVYRMLDKHGE----IIYVGKAKNLKNRVNSYFSKGAKDSKTLMMVEQ 66 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD 135 RI T + A LLE LIK+ +P +N + ++ L ++ +K V + + Sbjct: 67 IARIEITITPSDYEAYLLENNLIKQHRPKYNILFKDDKSYPYLVISRDKFPRVSFYRGKS 126 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL---------SRGRACFRSAL 186 + FG + + + L TI QK+ P+ SR R C + + Sbjct: 127 AYKKGQCFGPYVSISSVKNTLNTI---QKIF-------PIRQCENSYYKSRVRPCLQYQI 176 Query: 187 KRCAGACCGKESHEEHALRL 206 KRC C G S +++ +L Sbjct: 177 KRCLAPCVGLVSQQQYDEQL 196 >UniRef50_A8MLA3 Excinuclease ABC C subunit domain protein n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MLA3_ALKOO Length = 338 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 14/164 (8%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQS 77 ++L+ ++ +P +PG+Y + +Y+GKS ++RSRV S+ E+ M+ Sbjct: 6 QNLKEKIDHMPLKPGIYQMKDIEGNI-IYVGKSKSLRSRVRSYFYGEHESEKINRMVFHI 64 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE----KRVDVVYAKE 133 I +I T + A +LE LIK+ QP++N++ + +++ L++ K + VY KE Sbjct: 65 EDIHYIVTDTHLEAQILECALIKKLQPIYNQQFKNDQRYMYLKIEAYNRFKPLSAVYEKE 124 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR 177 + P F N+ +Q + LC G E + + Sbjct: 125 GHYCLGP-----FRNKNVLFDTVQFFQNIYPLCKNDHGYEFIYK 163 >UniRef50_C2FTR2 DNA polymerase III, epsilon subunit n=2 Tax=Sphingobacterium spiritivorum RepID=C2FTR2_9SPHI Length = 469 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 6/108 (5%) Query: 21 PEHLRSFLND-LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLR 75 P H+ + + LP +PG+Y+F + +Y+GK++NIR RVLSH + + L+ Sbjct: 194 PTHIDKMVFERLPAKPGIYIFKNNKGKI-IYVGKAINIRKRVLSHFTGNNTSNRRQLFLK 252 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE 123 + I + + E+ ALL+E +LIK+ P +N+ L++ L + E Sbjct: 253 EIFDIDFEESGTELMALLMECQLIKKHWPAYNRALKQYEPKLGLMIYE 300 >UniRef50_Q3IYX6 UvrABC system protein C n=23 Tax=Alphaproteobacteria RepID=UVRC_RHOS4 Length = 623 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 25/194 (12%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE----AAMLRQSRR 79 ++ +L L PGVY ++ + LY+GK+ N+R+RV ++ R A M+R++ Sbjct: 18 IQGYLKTLDGSPGVYRML-DAQSQVLYVGKARNLRARVSNYARPSGHSGRIARMIRETAS 76 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF--- 136 + ++ T E ALLLE LIK+ +P +N LR ++ +++ AK+ F Sbjct: 77 MMFLTTRTETEALLLEQNLIKQLKPRYNVLLRDDKSFP---------NILIAKDHPFPML 127 Query: 137 -------SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRC 189 S + FG FA+ A + L + L SR R C +KRC Sbjct: 128 KKHRGKKSEKGSYFGPFASAGAVNRTLNQL-QRVFLLRTCSDATFESRTRPCLLFQIKRC 186 Query: 190 AGACCGKESHEEHA 203 + C G+ E++A Sbjct: 187 SAPCVGRVPAEDYA 200 >UniRef50_Q47EE8 UvrABC system protein C n=6 Tax=Proteobacteria RepID=UVRC_DECAR Length = 603 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 12/186 (6%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRI 80 ++FL L PGVY + LY+GK+ N++ RV S+ R +P A M+ Q I Sbjct: 6 KAFLATLTELPGVYRMLDIGGNV-LYVGKAKNLKKRVASYFRENLSSPRIAHMVSQIASI 64 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 T E ALLLE LIK P +N R ++ + L++ + + + R Sbjct: 65 ETTATRTEAEALLLENNLIKSLAPRYNILFRDDKSYPYIVLSKGKFPRLGFFRGNPDRKA 124 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL---SRGRACFRSALKRCAGACCGKE 197 + FG + + A ++ + QK+ + L E +R R C +KRC+G C G Sbjct: 125 DYFGPYPSSWAVRDSIHLM---QKM-FRLRTCEDTVFSNRSRPCLLYQIKRCSGPCVGFI 180 Query: 198 SHEEHA 203 S +++A Sbjct: 181 SADDYA 186 >UniRef50_Q2G9G8 UvrABC system protein C n=2 Tax=Sphingomonadales RepID=UVRC_NOVAD Length = 658 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 15/199 (7%) Query: 24 LRSFLNDLPTRPGVY-LFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDE-AAMLRQSR 78 +R + L +PGVY + D LY+GK+ +++RV ++ R P+ M+ Q+R Sbjct: 53 IRETVQTLKPKPGVYRMLDARGDV--LYVGKARALKNRVANYTQVERLPNRLRRMVSQTR 110 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 ++ + T E ALLLEA+LIK +P +N LR ++ + L +K + Sbjct: 111 SMTIVTTNSEAEALLLEAQLIKRFRPPYNVLLRDDKSFPFILLRGDHAFPRISKHRGARK 170 Query: 139 AP-NLFGLFANR---RAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 A N +G FA+ + ALQ + + G + R R C ++RC+ C Sbjct: 171 AKGNYYGPFASAGSVNTTINALQKLFLLRSCNDGFMA----RRDRPCLLYQIRRCSAPCV 226 Query: 195 GKESHEEHALRLRQSLERL 213 G+ S ++ +RQ+ + L Sbjct: 227 GRISEADYGELVRQAKDFL 245 >UniRef50_B8I8F2 UvrABC system protein C n=2 Tax=Clostridium RepID=UVRC_CLOCE Length = 613 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 90/184 (48%), Gaps = 12/184 (6%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQSRRISW 82 L LP + GVY+ +++ + +Y+GK+V +++RV + + P AM+ + + Sbjct: 8 LKKLPDKSGVYIMK-DANGVVIYVGKAVVLKNRVRQYFQQSANHPPKVQAMVSKVSEFEY 66 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEKRVDVVYAKEVDFSRAP 140 I E+ AL+LE LIK+ +P +N L+ ++ + LNE+ ++ + V+ A Sbjct: 67 IVVDSEVEALMLECTLIKKYKPKYNILLKDDKHYPYIKVTLNEEYPRILKTRRVEKDGA- 125 Query: 141 NLFGLFANRRAALQALQTIAD--EQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG +++ A + T+ K C L + + + R C +K+C C G + Sbjct: 126 RYFGPYSSGFAVNDTIDTLKKLFSLKTCNKNLPRD-IGKTRPCLNYHMKQCLAPCQGGVN 184 Query: 199 HEEH 202 +E+ Sbjct: 185 RDEY 188 >UniRef50_Q7NBC4 UvrABC system protein C n=1 Tax=Mycoplasma gallisepticum RepID=UVRC_MYCGA Length = 592 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 20/191 (10%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE---AAMLRQSRR 79 +L+ L+ P +PG YL+ + + +YIGK+ NI RV + P + + ++ + Sbjct: 4 NLKQKLDLAPKKPGCYLWKNHLNEI-IYIGKAKNIYKRVHQYFNGPKDLKTSKLVNEIFY 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQL-CALQLNEKRVDVVYAKEVDFSR 138 + +I E ALLLEA LIK+ +P +N L+ N L EK ++Y + D + Sbjct: 63 VEFIEVNNENEALLLEANLIKKHKPRYNILLKDNNGYPYILMTKEKYPRLIYTRNFDPKK 122 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL-----SRGRACFRSALKRCAGAC 193 + +G FA+ L + LL L PL +GR C L C AC Sbjct: 123 GKH-YGPFASSEMKAYDLYNL---------LLKLFPLKNCFNKKGRKCEFYDLNLCMKAC 172 Query: 194 CGKESHEEHAL 204 + S ++ + Sbjct: 173 THEVSEADYEV 183 >UniRef50_A0QWV6 UvrABC system protein C n=27 Tax=Actinomycetales RepID=UVRC_MYCS2 Length = 706 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 27/199 (13%) Query: 21 PEHLRSFLNDLPTRPGVYLF---HGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAA 72 P R +P PGVY F HG +Y+GK+ ++RSR+ S+ P Sbjct: 4 PATYRPAPGSIPVEPGVYRFRDPHGRV----IYVGKAKSLRSRLTSYFADITSLAPRTRQ 59 Query: 73 MLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEKRVDVVY 130 M+ + + W E+ AL LE IKE P FN R R ++ + A+ LNE+ Y Sbjct: 60 MVMTAGSVEWTVVTTEVEALQLEYNWIKEFDPRFNVRYRDDKSYPVLAVTLNEE-----Y 114 Query: 131 AKEVDFSRAP-----NLFGLFANRRAALQALQ--TIADEQKLCYGLLGLEPLSRGRACFR 183 + + + R P FG +++ A + L T + C + R C Sbjct: 115 PRLMVY-RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHKQIDRPCLL 173 Query: 184 SALKRCAGACCGKESHEEH 202 + +C+ C G+ S E+H Sbjct: 174 GYIDKCSAPCVGRVSAEQH 192 >UniRef50_C3XEM6 Excinuclease ABC subunit C n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XEM6_9HELI Length = 563 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 27/192 (14%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLR----- 75 L+S L +P PG+Y ++ + D + LY+GK+ N++ RV S+ +P+ LR Sbjct: 5 LQSQLQKIPNEPGIYQYYDKDDKL-LYVGKAKNLKKRVKSYFTKECSPNPKNSLRIQHMV 63 Query: 76 -QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEKRVDVVYAK 132 Q I I A E AL+LE IK Q P +N LR ++ + LN+ + Sbjct: 64 AQIAHIHTIIVANEHEALILENSFIKSQNPKYNILLRDDKTYPYITINLNDCYPRFSITR 123 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIAD-----EQKLCYGLLGLEPLSRGRACFRSALK 187 + + FG + + A + LQ++ + +Q C L G +P C + Sbjct: 124 RIIKHKDTLYFGPYP--KGAKEILQSLYELFPIVQQASC--LKGKKP------CLYYQIG 173 Query: 188 RCAGACCGKESH 199 +C G C K+S+ Sbjct: 174 KCLGVCSIKDSN 185 >UniRef50_UPI0000510268 hypothetical protein BlinB_15797 n=1 Tax=Brevibacterium linens BL2 RepID=UPI0000510268 Length = 581 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 12/175 (6%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE----AAMLRQSRRISWICTA 86 +P PGVY+F + + LYIGKS N+ RV + + A M+ ++ +S + A Sbjct: 229 VPAEPGVYMFLDGTRRV-LYIGKSGNMARRVRGYFNASENRGRMAEMITAAQEVSCLPCA 287 Query: 87 GEIGALLLEARLIKEQQPLFNKRLR---RNRQLCALQLNEKRVDVVYAKEVDFSRAPNLF 143 + A + E RLI E P +N+R + RN + R+ VV A Sbjct: 288 HALEAEVREIRLIGELAPPYNRRSKNPERNSWIVLSDEEYPRLSVVRANTALEKSPATPL 347 Query: 144 GLFANRRAALQALQTIADE---QKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 G F +R+ A QA++ + D K C + L+ R C S + +C G C G Sbjct: 348 GPFRSRKTA-QAVKELLDTLYPVKRCTAKITASNLASHRPCVSSQVGQCGGPCAG 401 >UniRef50_B0VLX1 UvrABC system protein C n=17 Tax=Moraxellaceae RepID=UVRC_ACIBS Length = 599 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 14/201 (6%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSH----LRTPDEAAMLRQSR 78 H+ L +L PGVY G+ + LY+GK+ N+++RV S+ + P A++ + Sbjct: 8 HIEKILANLTQLPGVYKMLGKEGEL-LYVGKAKNLKNRVSSYFVKTIEHPKTQALVARIY 66 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR--VDVVYAKEVDF 136 I + T E ALLLE LIK+ +P +N LR ++ + ++ + + + Sbjct: 67 DIETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSADKPYPRIASGRGKGK 126 Query: 137 SRAPNLFGLFA---NRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 + FG + + R L LQ + + ++ R R C + +KRC+ C Sbjct: 127 HQIGKFFGPYPSAYSARDTLLVLQKLFNVRQCENSYFS----QRKRPCLQYQIKRCSAPC 182 Query: 194 CGKESHEEHALRLRQSLERLR 214 G S E++ + S+ L+ Sbjct: 183 VGLVSPEDYKEDVNNSIRFLQ 203 >UniRef50_C9AVR8 Excinuclease ABC n=3 Tax=Enterococcus casseliflavus RepID=C9AVR8_ENTCA Length = 321 Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 6/118 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQ 76 E L++ N LP +PGVYL + + + LY+GK+ +++ RV+S+ R + A ++ Sbjct: 14 EFLKNKANALPEKPGVYLMKDQHNEV-LYVGKAKSLKQRVVSYFRKNQQHANKVLRLVYN 72 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEV 134 I T E+ ALLLE RLI+ P++N+++ + C + L + ++ Sbjct: 73 VVDFETIETDTELDALLLECRLIQAFHPIYNRQMNHSANYCFVDLTNHTFTITQTPQI 130 >UniRef50_C2M5F0 DNA polymerase III, epsilon subunit n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M5F0_CAPGI Length = 453 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 13/207 (6%) Query: 11 EFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE 70 EF + P HL S L+ LP + G+Y + + + LY+ KS NIR RV H + Sbjct: 172 EFVKQDLSPLPMHLLSMLDGLPNQLGIYYLYDKKGKL-LYMSKSKNIRKRVNEHFTGEGK 230 Query: 71 AAMLRQSR--RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCAL-QLNEKRVD 127 + Q + ++ + T ++ A L + K F + ++ AL +KR Sbjct: 231 RDIFLQQQVGKVMYELTGTDLIATLKQEEEHKHITVHFKTKKKKKTFPFALVSHKDKRGY 290 Query: 128 VVYAKEVDFSRAPN--LFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA-CFRS 184 + + E+ R P +F ++ L L + + +LC L G S+ R C+ Sbjct: 291 LCLSVEL---RTPKQEALAIFESQEEGLNLLFEMTERYELCTKLNGF---SQARTYCYNH 344 Query: 185 ALKRCAGACCGKESHEEHALRLRQSLE 211 ++ +CAGAC G E+ E++ R+ Q+LE Sbjct: 345 SIGKCAGACMGDEAVEDYNQRVHQALE 371 >UniRef50_A8ZVJ2 Excinuclease ABC, C subunit n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZVJ2_DESOH Length = 626 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 19/203 (9%) Query: 18 YEYPEH-LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAM 73 +E PE L L P RPGVYL + + +Y+GK+ N++ R+ S+ D Sbjct: 11 HELPEDRLAEKLAGAPARPGVYLMKDGAGAI-IYVGKAFNLKKRLASYFVKKERLDLKTG 69 Query: 74 LRQSRRISW--ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR----VD 127 L R + + I TA E AL+LEA LI+ +P +N L+ +++ +L+++ ++ ++ Sbjct: 70 LLMERVVDFDTIVTATENEALILEASLIRRHKPRYNVLLKDDKRYPSLRIDPRQPYPALE 129 Query: 128 VVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSA 185 +V D FG F++ RA + L+ + +L C G + + R R C Sbjct: 130 IVRKTRPD---GAVYFGPFSSARAVRETLKVVDKTFRLRKCRGKVFKK---RSRPCINFQ 183 Query: 186 LKRCAGACCGKESHEEHALRLRQ 208 + C G C ++A +R+ Sbjct: 184 MGLCLGPCFYDVPENDYAEAVRE 206 >UniRef50_A9EYQ9 Excinuclease ABC, subunit C n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EYQ9_SORC5 Length = 742 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 19/175 (10%) Query: 32 PTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQ-SRRISWICT 85 PT PG YLF ++ + +Y+GK+ ++RSRV S+ + A +LR+ + + T Sbjct: 22 PTTPGCYLFIDKAGAV-VYVGKAKSLRSRVRSYFQESGSDARYFIPILRKIVADLETVVT 80 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR----VDVVYAKEVDFSRAPN 141 A E A +LE L+K+ +P FN +LR ++ L+L+ ++ ++ V D +R Sbjct: 81 ATEKEAAVLENELVKQHKPRFNVKLRDDKDFLCLKLDTQKAWPMLETVRRPAPDKAR--- 137 Query: 142 LFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGACC 194 FG + + +A + L + +L C E SR R C + +KRC C Sbjct: 138 YFGPYHSATSARRTLHLVNKHFQLRTCS---DTEMASRRRPCLQYQIKRCLAPCV 189 >UniRef50_C1B4L2 UvrABC system protein C n=10 Tax=Actinomycetales RepID=UVRC_RHOOB Length = 743 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 27/199 (13%) Query: 21 PEHLRSFLNDLPTRPGVYLF---HGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAA 72 P R +P PGVY F HG +Y+GK+ ++RSR+ S+ P Sbjct: 4 PSTYRPATGTIPVDPGVYKFRDPHGRV----IYVGKAKSLRSRLNSYFADVSTLHPRTRQ 59 Query: 73 MLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEKRVDVVY 130 M+ + + W + E+ AL LE IKE P FN R R ++ + A+ LNE+ Y Sbjct: 60 MVTTAGSVEWTVVSTEVEALQLEYNWIKEFDPRFNVRYRDDKTYPVLAVTLNEE-----Y 114 Query: 131 AKEVDFSRAP-----NLFGLFANRRAALQALQTI--ADEQKLCYGLLGLEPLSRGRACFR 183 + + R P FG +++ A + L + + C + GR C Sbjct: 115 PRLFVY-RGPRRKGVRYFGPYSHAWAIRETLDLLLRVFPARTCSAGVFKRHNQIGRPCLL 173 Query: 184 SALKRCAGACCGKESHEEH 202 + +C+ C G+ S EH Sbjct: 174 GYIDKCSAPCVGRVSAAEH 192 >UniRef50_B9KXM0 DNA polymerase III, epsilon subunit n=2 Tax=Thermomicrobia (class) RepID=B9KXM0_THERP Length = 693 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 24/191 (12%) Query: 27 FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQSRRIS 81 L D P PGVYL + LY+GK+ N+R RV S+ P +L I Sbjct: 285 LLADTPELPGVYLMRDALGRV-LYVGKARNLRQRVRSYFSQPLGYTRKMDGLLESVAEIE 343 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQL--CALQLNEKRVDVVYAKEVDFSRA 139 + T E+ ALLLE++ ++ +P +N +LR + ++L ++ A++ D A Sbjct: 344 TVVTGSELEALLLESQFVQRYKPPYNTQLRNHEAYPYVKVELGRPWPRLMLARQRDDDDA 403 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR--------GRACFRSALKRCAG 191 G F + AA ++ L + LL L R GR C + L RC G Sbjct: 404 -VYVGPFRSTAAARSVVE-------LLHQLLPLRTCHRSFRDARSYGRPCLQLTLGRCIG 455 Query: 192 ACCGKESHEEH 202 C G + +E+ Sbjct: 456 PCTGCVTPDEY 466 >UniRef50_B7J223 UvrABC system protein C n=22 Tax=Borrelia RepID=UVRC_BORBZ Length = 603 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 13/205 (6%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE---AAMLRQSRRISWICTAG 87 LPT G Y E+ + LYIGK+ N+RSRV S+ + +++ + I I T Sbjct: 15 LPTTSGCYKMLNENKKI-LYIGKAKNLRSRVKSYFLEKNSHKIKILMKNVKSIEVITTNS 73 Query: 88 EIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFA 147 E ALLLE LIK +P +N +L+ + +++ ++ ++ + FG F Sbjct: 74 EYEALLLECNLIKTHKPDYNVKLKDGKGYPMVRITHEKYPRIFKTRKIINDKSEYFGPFT 133 Query: 148 NRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALR 205 N + Q L I K+ C C + +C G C + +E+ Sbjct: 134 NVKKLDQVLDFINKTFKIRKCKK-------KSNAPCLYYHMGQCLGVCYKENLEKEYQKE 186 Query: 206 LRQSLERLRVVCWPWQGAVALKEQH 230 L ++ L + +K +H Sbjct: 187 LDKAKSILNGNISEISSQIDIKLKH 211 >UniRef50_C5NYN4 Excinuclease ABC subunit C n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYN4_9BACL Length = 582 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 10/182 (5%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAAMLRQSRRISWICTAG 87 LP PG YL+ + +Y+GK+ N+++RV S+ ++ + + +I Sbjct: 12 LPDNPGCYLYKDNIGEI-IYVGKAKNLKNRVKSYFTGTHNKKTQTLVSKIEDLEYIIVNS 70 Query: 88 EIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAPNLFGLF 146 E ALLLE LIK+ +P FN RL+ ++ L + E+ ++ ++ + FG + Sbjct: 71 EKEALLLENNLIKKYRPYFNIRLKDDKSYPYLMITKEEHPRLLMTRKYKKNNKNIYFGPY 130 Query: 147 ANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRL 206 + ++A + ++ I D+ Y L P+ + R C + C G C K + +++ ++ Sbjct: 131 VDIKSATE-VKKILDK---IYPLRKCNPVEK-RPCMYYQIGECIGPCAKKITADDYKSQI 185 Query: 207 RQ 208 + Sbjct: 186 SK 187 >UniRef50_B0VH58 Excinuclease ABC, C subunit n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VH58_9BACT Length = 601 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 8/197 (4%) Query: 20 YPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE----AAMLR 75 + E + + L LP +PGVYL+ + T+ +YIGK++N++ R+ ++L + +++ Sbjct: 4 FSEEIETKLALLPEQPGVYLWKDKDGTI-IYIGKALNLKHRIKNYLNPAGKDLKTEHLIK 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEKRVDVVYAKE 133 + +I T E A +LEA L+K +P +N L+ +++ + +NE + +E Sbjct: 63 NIADLDYIITNSEADAFILEATLVKRYRPKYNIMLKDDKRYPFVKITVNEPFPRIFITRE 122 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 + A FG + R L+ + L + + + C L +C C Sbjct: 123 LLKDNA-KYFGPYTEVRYLRNTLRDLEWIFPLRSCNRNIPKIKYKQPCMNFQLGKCPAPC 181 Query: 194 CGKESHEEHALRLRQSL 210 G S + +A + Q L Sbjct: 182 IGNISQKNYAKTVNQLL 198 >UniRef50_B2I637 UvrABC system protein C n=15 Tax=Xanthomonadaceae RepID=UVRC_XYLF2 Length = 621 Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 81/193 (41%), Gaps = 28/193 (14%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-TPDEA---AMLRQSRRI 80 + F L T PGVY + DT+ LY+GK+ +R RV S+ TP AML Q R+ Sbjct: 12 KRFAAHLSTAPGVYRMYAADDTL-LYVGKAGALRKRVASYFNGTPKNTRLTAMLAQVVRM 70 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 T E ALLLE +LIK P +N LR ++ + L + + R P Sbjct: 71 DVTITRNEAEALLLENQLIKSLTPRYNVLLRDDKSYPYVLLTRE-----AWPRIALHRGP 125 Query: 141 NL-----FGLFANRRAALQALQTIADEQKLCYGLLGLEPL------SRGRACFRSALKRC 189 + FG + + + D L + L L +R R C + + RC Sbjct: 126 QIVPGRYFGPYP-------GVTAVRDMLNLIHKLFKLRSCEDSVFRNRSRPCLQYQIGRC 178 Query: 190 AGACCGKESHEEH 202 + C +H+ + Sbjct: 179 SAPCVNVVTHDNY 191 >UniRef50_Q820N6 UvrABC system protein C n=2 Tax=Proteobacteria RepID=UVRC_NITEU Length = 604 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 14/179 (7%) Query: 25 RSFLNDLPTRPGVY-LFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRR 79 ++F+ LP +PGVY + + D +Y+GK++++R RV S+ + +P M+ Q Sbjct: 9 KAFVLTLPAQPGVYRMLNAAGDV--IYVGKAIDLRKRVSSYFQKSGLSPRIQLMVSQIAG 66 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRA 139 I T E ALLLE LIK P +N R ++ L L + Sbjct: 67 IETTVTRSEAEALLLENNLIKSLAPRYNILFRDDKSYPYLLLTRHIFPRLAFYRGALDDR 126 Query: 140 PNLFGLFANR---RAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 FG F N ++++Q LQ + + + R R C +KRC+G C G Sbjct: 127 HQYFGPFPNAGVVKSSIQLLQKVFRLRTCENSVFD----HRTRPCLLYQIKRCSGPCVG 181 >UniRef50_D1AXF7 Excinuclease ABC, C subunit n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AXF7_STRM9 Length = 588 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 59/103 (57%), Gaps = 5/103 (4%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQSRRISWI 83 + ++PT PGVY+ +D + +Y+GK+ N+++RV S+ P + +++ + I + Sbjct: 4 IKNIPTNPGVYMMKDINDKV-IYVGKAKNLKNRVSSYFNNPKSSMKTFELIKHIKDIEFF 62 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV 126 E+ AL+LE LIK+ P +N L+ N+ L++ +++ Sbjct: 63 LCNSELEALILENNLIKKYLPKYNILLKDNKTYPYLKITTEKI 105 >UniRef50_A8ESX8 UvrABC system protein C n=26 Tax=Epsilonproteobacteria RepID=UVRC_ARCB4 Length = 616 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 35/232 (15%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----------TPDEA 71 +L+ L LP GVY + ++ + LYIGK+ +++RV S+ + +P Sbjct: 2 NLQEKLQQLPNDAGVYQYFDKNGHL-LYIGKAKILKNRVKSYFKFTPKLQPADKLSPRIY 60 Query: 72 AMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQ--LCALQLNEK--RVD 127 M+ + WI E AL+LE LIK+ +P +N LR ++ + +E R+D Sbjct: 61 KMISEVESCEWIVVPNEHDALILENSLIKQLKPKYNILLRDDKTYPYIFVDFDEDFPRLD 120 Query: 128 VVYAKEVDFSRAPNLFGLFAN-RRAALQALQTIAD--EQKLCYGLLGLEPLSRGRACFRS 184 + + + S++ FG ++ R L ++ I ++K C + +AC Sbjct: 121 I--TRRIQKSKSIKYFGPYSTGARDMLDSIYEIVPLVQKKSC--------VKGKKACLFY 170 Query: 185 ALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQY 236 +++C C K S EE+A + +LE + + + + + +M QY Sbjct: 171 QIQKCLAPCENKISKEEYAKIVENALE------YIYNKTKLISKLNEKMLQY 216 >UniRef50_A9AEP6 DNA polymerase III, epsilon subunit n=55 Tax=Burkholderia RepID=A9AEP6_BURM1 Length = 398 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 5/92 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQS 77 E + L+ P G Y GE D PLY+G+SV +R R+ + L R+ E + +Q Sbjct: 220 EVTEALLDTAPAGCGAYALFGEED-QPLYVGRSVRVRQRLRALLTGERRSSKEMRIAQQV 278 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKR 109 RR+ W T E+GA+L+EA+ I +P +N+R Sbjct: 279 RRVEWRETGNELGAMLVEAQWIARLRPSYNRR 310 >UniRef50_B0AA93 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA93_9CLOT Length = 351 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 14/171 (8%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSRRISW 82 LN+LP PG+Y + D + LY+GKS ++ RV S+ R+ M++ I Sbjct: 30 LNNLPEEPGIYFMKDKEDRL-LYVGKSKCLKKRVKSYFLNSTNRSRKIERMIKNISHIDI 88 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNL 142 I T E AL LE + I +P++N L+ + + L+EK +++ + Sbjct: 89 IKTDTEFDALFLECQNIHRLKPMYNTLLKSYEKYKYICLDEKDHNIIKISN-EIEEDGIY 147 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 FG ++ +R L I +++ + L R C R L +C G C Sbjct: 148 FGPYSFKR----KLDII---KEIIIKVYRLPICKRQNKCIRYDLDKCIGPC 191 >UniRef50_Q2GJJ1 UvrABC system protein C n=6 Tax=Anaplasma RepID=UVRC_ANAPZ Length = 614 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 16/179 (8%) Query: 35 PGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISWICTAGEIG 90 PGVY G D + LY+GK+ +++ R+ S+L + + M++Q R+ T E Sbjct: 27 PGVYKMFGTEDRL-LYVGKAKDLKKRLSSYLSINRMSVNVYTMVKQIVRLEITVTENETE 85 Query: 91 ALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVD--VVYAKEVDFSRAPNLFGLFAN 148 ALLLEA+LIK +P +N +R ++ + ++ + V++ ++ R L+G F + Sbjct: 86 ALLLEAKLIKSLKPKYNIIMRDDKFYPYILFSKHKYPRIVLHREKRSEGRYTGLYGPFLS 145 Query: 149 RRAALQALQTIADEQKLCYGLLGLEP----LSRGRACFRSALKRCAGACCGKESHEEHA 203 + TI LL P +R R C +K C+ C K + E++A Sbjct: 146 SVMTRHIIATIKKA-----FLLRSCPDNFFATRARPCIEYEIKNCSAPCMQKITEEDYA 199 >UniRef50_D2RB48 Excinuclease ABC, C subunit n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RB48_GARVA Length = 780 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 13/183 (7%) Query: 30 DLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQSRRISWIC 84 D+P +PGVY + + + +Y+GK+ N+R+R+ ++ + P +M+ +R + W Sbjct: 71 DIPAQPGVYKWR-DGEGRVIYVGKAKNLRNRLANYFQPLYQLHPRTQSMVLTARSLEWTV 129 Query: 85 TAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAPNLF 143 + E AL LE IK P FN R ++ + ++ E+ V+ +R F Sbjct: 130 VSTEFEALTLEYTWIKAFNPRFNVVFRDDKTYPYVAVSLEETFPRVWITRNRSARHARYF 189 Query: 144 GLFAN----RRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 G +A R + L+T + C + + GR C +++ +C+ C G Sbjct: 190 GPYAKVWPLRHSLDSLLKTFP--IRTCSSSVFSKAHRTGRPCLFASIGKCSAPCIGNIDP 247 Query: 200 EEH 202 EH Sbjct: 248 SEH 250 >UniRef50_C5ADA8 UvrABC system protein C (Protein uvrC) n=4 Tax=Proteobacteria RepID=C5ADA8_BURGB Length = 756 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 83/188 (44%), Gaps = 16/188 (8%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRI 80 + L LP PGVY ++ + ++ LY+GK+ N++ RV S+ +P A M+ + RI Sbjct: 32 KPVLAQLPHLPGVYRYYDAAGSV-LYVGKARNLKKRVSSYFTKTQLSPRIAMMVTRIARI 90 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVD--VVYAKEVDFSR 138 T E ALLLE LIK P +N R ++ L+L Y VD R Sbjct: 91 ETTVTRSEAEALLLENNLIKALAPRYNILFRDDKSYPYLKLTGHAFPRMAYYRGAVD--R 148 Query: 139 APNLFGLFANR---RAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 FG F + R ++Q LQ + + + +R R C + RC+ C G Sbjct: 149 KNQYFGPFPSAWAVRESIQILQRVFQLRTCEDSVFN----NRTRPCLLHQIGRCSAPCVG 204 Query: 196 KESHEEHA 203 ++A Sbjct: 205 AIDAADYA 212 >UniRef50_B8FHR2 UvrABC system protein C n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=UVRC_DESAA Length = 603 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 18/178 (10%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSRRISW 82 L L PGVYL ES + +Y+GK+ +++ RV S+ R ++++ Sbjct: 8 LATLSNGPGVYLMKDESGEI-IYVGKARSLKKRVSSYFLEKPNRDLKTGILVKKIASFDA 66 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK----RVDVVYAKEVDFSR 138 I E AL+LEA LI++ +P +N L+ ++ +L+++ + R++VV + D Sbjct: 67 ILVTTEKEALILEANLIRKHKPRYNILLKDGKRFPSLRIDVRTSYPRLEVVRKVKKD--- 123 Query: 139 APNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGACC 194 FG F++ L+ I +L C EP R R C + +C G CC Sbjct: 124 GAIYFGPFSSAGKLRSTLKIINKTFQLRKCKQK---EPPKRNRPCLNYQMGQCLGPCC 178 >UniRef50_Q6AKB8 UvrABC system protein C n=3 Tax=Deltaproteobacteria RepID=UVRC_DESPS Length = 607 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 92/192 (47%), Gaps = 21/192 (10%) Query: 20 YPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE-----AAML 74 +PE + L P +PGVYL ++ +Y+GK+ ++ R+ S+ R ML Sbjct: 4 FPEKI---LQSTPHKPGVYLML-DAKARVIYVGKAKDLVKRLTSYTRHSSSEHNKTTVML 59 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLR--RNRQLCALQLNEK--RVDVVY 130 ++ ++ I T E AL+LEA LIK+ +P +N LR +N A+ + E+ RV +V Sbjct: 60 KKVEQVKTIITTTEKEALILEASLIKKHKPRYNIILRDDKNYPYIAVTVGEEWPRVMMVR 119 Query: 131 AKEVDFSRAPNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKR 188 K D SR FG +++ A L+ IA L C G L P R R C + + Sbjct: 120 RKRRDNSR---YFGPYSSATAMWATLKLIASLFPLRNCRG-EKLRP--RTRPCLNRQIGK 173 Query: 189 CAGACCGKESHE 200 C C G S + Sbjct: 174 CLAPCTGNVSRK 185 >UniRef50_A9A4M1 Excinuclease ABC, C subunit n=2 Tax=Thaumarchaeota RepID=A9A4M1_NITMS Length = 528 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 17/172 (9%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAAMLRQSRRISWICTAG 87 +PT PG+YL +SD +YIGK+ N++ RV S+ + +++ I ++ T Sbjct: 10 IPTDPGIYLMK-DSDGTIIYIGKAKNLKKRVKSYFLKNQNYKTQKLVQNISDIEFVLTDN 68 Query: 88 EIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVY----AKEVDFSRAPNLF 143 E A LLE+ +IK+ +P FN L+ ++ L++++++ + ++ F F Sbjct: 69 ESEAFLLESNMIKKYRPRFNIELKDQQRYTYLRISDEKYPRLLVARRTRDGKFLGKGKTF 128 Query: 144 GLFANRRAALQALQTI--ADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 G F + L + + A + ++C L + C L C G C Sbjct: 129 GPFTQGSSKLLTIGALRKAFQIRICKTL-------PKKVCLEYHLGNCEGPC 173 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P59439 Excinuclease cho n=116 Tax=Gammaproteobacteria R... 418 e-115 UniRef50_B1XZE9 Excinuclease ABC C subunit domain protein n=1 Ta... 280 4e-74 UniRef50_C1DM13 Excinuclease ABC protein, subunit C n=1 Tax=Azot... 276 5e-73 UniRef50_Q3SKJ9 DNA polymerase III, epsilon subunit n=4 Tax=Prot... 276 7e-73 UniRef50_Q3BWL1 Excinuclease subunit n=5 Tax=Xanthomonas RepID=Q... 276 9e-73 UniRef50_Q21VB4 DNA polymerase III, epsilon subunit n=7 Tax=Beta... 274 3e-72 UniRef50_D0L0M1 DNA polymerase III, epsilon subunit n=1 Tax=Halo... 272 7e-72 UniRef50_Q1LGD6 DNA polymerase III, epsilon subunit n=5 Tax=cell... 267 2e-70 UniRef50_C7RVE9 Exonuclease RNase T and DNA polymerase III n=1 T... 267 3e-70 UniRef50_A4XIQ3 UvrABC system protein C n=2 Tax=Clostridia RepID... 257 4e-67 UniRef50_B7AWB5 Putative uncharacterized protein n=1 Tax=Bactero... 255 1e-66 UniRef50_A4SZE6 DNA polymerase III, epsilon subunit n=1 Tax=Poly... 254 2e-66 UniRef50_A3DJ07 UvrABC system protein C n=15 Tax=Bacteria RepID=... 252 1e-65 UniRef50_Q3AFE5 UvrABC system protein C n=1 Tax=Carboxydothermus... 252 1e-65 UniRef50_A9B4F8 Excinuclease ABC, C subunit n=1 Tax=Herpetosipho... 251 2e-65 UniRef50_B2JFL2 Excinuclease ABC, C subunit n=2 Tax=Burkholderia... 251 2e-65 UniRef50_Q31GI3 UvrABC system protein C n=2 Tax=Bacteria RepID=U... 249 9e-65 UniRef50_Q2L1Q9 Excinuclease (Fragment) n=1 Tax=Bordetella avium... 248 1e-64 UniRef50_C5ADA8 UvrABC system protein C (Protein uvrC) n=4 Tax=P... 248 2e-64 UniRef50_A6SXR9 UvrABC system protein C n=19 Tax=Betaproteobacte... 248 2e-64 UniRef50_Q1LKN9 UvrABC system protein C n=32 Tax=Proteobacteria ... 248 2e-64 UniRef50_A3NXK5 UvrABC system protein C n=59 Tax=Proteobacteria ... 248 2e-64 UniRef50_A6BHR5 Putative uncharacterized protein n=1 Tax=Dorea l... 247 4e-64 UniRef50_B3R8V7 DNA polymerase III, epsilon subunit + GIY-YIG en... 247 4e-64 UniRef50_A5WBX3 UvrABC system protein C n=3 Tax=Psychrobacter Re... 246 5e-64 UniRef50_Q12W02 UvrABC system protein C n=1 Tax=Methanococcoides... 245 9e-64 UniRef50_C9KP10 Excinuclease ABC subunit C n=1 Tax=Mitsuokella m... 245 1e-63 UniRef50_A9KSS0 UvrABC system protein C n=59 Tax=Firmicutes RepI... 245 1e-63 UniRef50_B0K791 UvrABC system protein C n=11 Tax=Thermoanaerobac... 244 2e-63 UniRef50_C4K928 DNA polymerase III, epsilon subunit n=1 Tax=Thau... 244 4e-63 UniRef50_Q47EE8 UvrABC system protein C n=6 Tax=Proteobacteria R... 243 4e-63 UniRef50_B8CYK1 Excinuclease ABC, C subunit n=1 Tax=Halothermoth... 243 5e-63 UniRef50_B3QRR8 Excinuclease ABC, C subunit n=3 Tax=Bacteria Rep... 242 1e-62 UniRef50_C6MYN0 Excinuclease ABC subunit n=1 Tax=Legionella dran... 241 2e-62 UniRef50_Q5F928 UvrABC system protein C n=29 Tax=Betaproteobacte... 240 3e-62 UniRef50_C0ZZE8 UvrABC system protein C n=14 Tax=Actinomycetales... 240 4e-62 UniRef50_D1VGT9 Excinuclease ABC, C subunit n=1 Tax=Frankia sp. ... 240 4e-62 UniRef50_Q24WC0 UvrABC system protein C n=16 Tax=Firmicutes RepI... 240 6e-62 UniRef50_Q180Q8 UvrABC system protein C n=8 Tax=Clostridiales Re... 239 8e-62 UniRef50_Q820N6 UvrABC system protein C n=2 Tax=Proteobacteria R... 239 1e-61 UniRef50_B0VLX1 UvrABC system protein C n=17 Tax=Moraxellaceae R... 238 2e-61 UniRef50_C2CW30 Excinuclease ABC subunit C n=1 Tax=Gardnerella v... 237 3e-61 UniRef50_D1RJY2 Excinuclease ABC subunit C n=1 Tax=Legionella lo... 237 3e-61 UniRef50_B2A711 Excinuclease ABC, C subunit n=2 Tax=Firmicutes R... 237 3e-61 UniRef50_A7VUD6 Putative uncharacterized protein n=4 Tax=Clostri... 237 3e-61 UniRef50_A4FBL9 UvrABC system protein C n=26 Tax=Actinomycetales... 237 4e-61 UniRef50_Q5X1P5 UvrABC system protein C n=7 Tax=Gammaproteobacte... 237 4e-61 UniRef50_C9LR57 Excinuclease ABC subunit C n=1 Tax=Dialister inv... 236 5e-61 UniRef50_D2RIL8 Excinuclease ABC, C subunit n=3 Tax=Veillonellac... 236 6e-61 UniRef50_Q0F271 Excinuclease ABC subunit C n=1 Tax=Mariprofundus... 236 7e-61 UniRef50_UPI00016BFB47 excinuclease ABC, C subunit n=1 Tax=Epulo... 235 9e-61 UniRef50_A5FM03 UvrABC system protein C n=25 Tax=Bacteroidetes R... 235 1e-60 UniRef50_Q2JCI3 UvrABC system protein C n=12 Tax=Actinomycetales... 235 1e-60 UniRef50_Q3ZYA3 UvrABC system protein C n=5 Tax=Dehalococcoides ... 235 1e-60 UniRef50_Q2LR71 UvrABC system protein C n=1 Tax=Syntrophus acidi... 235 1e-60 UniRef50_C1PCU9 Excinuclease ABC C subunit domain protein n=1 Ta... 235 1e-60 UniRef50_Q03F33 UvrABC system protein C n=7 Tax=Firmicutes RepID... 235 1e-60 UniRef50_B8I8F2 UvrABC system protein C n=2 Tax=Clostridium RepI... 234 2e-60 UniRef50_C2MAD2 Excinuclease ABC subunit C n=1 Tax=Porphyromonas... 234 2e-60 UniRef50_Q2SF17 UvrABC system protein C n=47 Tax=Proteobacteria ... 234 3e-60 UniRef50_Q0RH00 DNA excision repair enzyme UvrABC; UvrC subunit ... 234 3e-60 UniRef50_C1B4L2 UvrABC system protein C n=10 Tax=Actinomycetales... 234 3e-60 UniRef50_A5EW70 UvrABC system protein C n=1 Tax=Dichelobacter no... 234 4e-60 UniRef50_UPI00017881F9 excinuclease ABC, C subunit n=1 Tax=Geoba... 234 4e-60 UniRef50_Q2S280 UvrABC system protein C n=1 Tax=Salinibacter rub... 233 5e-60 UniRef50_D1CFI6 Excinuclease ABC, C subunit n=1 Tax=Thermobaculu... 233 5e-60 UniRef50_C7RHW1 Excinuclease ABC, C subunit n=4 Tax=Clostridiale... 233 7e-60 UniRef50_C7HUD8 UvrABC system, C protein n=2 Tax=Anaerococcus Re... 232 8e-60 UniRef50_Q1YU82 DNA polymerase III, epsilon subunit n=1 Tax=gamm... 232 9e-60 UniRef50_Q0A8X6 UvrABC system protein C n=19 Tax=Gammaproteobact... 232 9e-60 UniRef50_C0N1K0 Exonuclease family n=1 Tax=Methylophaga thiooxid... 232 9e-60 UniRef50_C7MCN8 Excinuclease ABC subunit C n=1 Tax=Brachybacteri... 232 1e-59 UniRef50_A1BED8 UvrABC system protein C n=12 Tax=cellular organi... 232 1e-59 UniRef50_A0M672 UvrABC system protein C n=7 Tax=Bacteroidetes Re... 232 1e-59 UniRef50_A0QWV6 UvrABC system protein C n=27 Tax=Actinomycetales... 232 1e-59 UniRef50_Q0BPX7 UvrABC system protein C n=43 Tax=Alphaproteobact... 232 1e-59 UniRef50_Q72DX8 UvrABC system protein C n=3 Tax=Desulfovibrio vu... 231 2e-59 UniRef50_Q4JVI8 UvrABC system protein C n=8 Tax=Corynebacterium ... 231 2e-59 UniRef50_Q5LIY7 UvrABC system protein C n=26 Tax=Bacteroidetes R... 231 2e-59 UniRef50_B9KY82 Excinuclease ABC, C subunit n=1 Tax=Thermomicrob... 231 2e-59 UniRef50_D1NSJ5 Excinuclease ABC subunit C n=3 Tax=Actinobacteri... 231 2e-59 UniRef50_B1CBT5 Putative uncharacterized protein n=1 Tax=Anaerof... 230 3e-59 UniRef50_Q11YP9 UvrABC system protein C n=3 Tax=Bacteroidetes Re... 230 3e-59 UniRef50_C3JAE7 Excinuclease ABC subunit C n=2 Tax=Bacteria RepI... 230 4e-59 UniRef50_Q6MKS2 UvrABC system protein C n=1 Tax=Bdellovibrio bac... 230 4e-59 UniRef50_B0S0L4 UvrABC system protein C n=2 Tax=Finegoldia magna... 230 4e-59 UniRef50_C6NXT8 Excinuclease ABC subunit C n=2 Tax=Gammaproteoba... 230 4e-59 UniRef50_B5YHU3 Excinuclease ABC, C subunit n=1 Tax=Thermodesulf... 230 5e-59 UniRef50_A0Q5Q7 UvrABC system protein C n=18 Tax=Francisella Rep... 230 5e-59 UniRef50_D1BLY6 Excinuclease ABC, C subunit n=5 Tax=Veillonellac... 230 5e-59 UniRef50_C7LTD0 Excinuclease ABC, C subunit n=2 Tax=Desulfovibri... 230 5e-59 UniRef50_A4AB96 Excinuclease ABC subunit C n=3 Tax=unclassified ... 230 5e-59 UniRef50_B6IZT9 UvrABC system protein C n=6 Tax=Coxiella burneti... 230 6e-59 UniRef50_A0LHP7 Excinuclease ABC, C subunit n=1 Tax=Syntrophobac... 230 6e-59 UniRef50_Q6MDC8 UvrABC system protein C n=1 Tax=Candidatus Proto... 230 6e-59 UniRef50_A1AWP2 Excinuclease ABC subunit C n=1 Tax=Candidatus Ru... 229 6e-59 UniRef50_A3JBF5 Putative uncharacterized protein n=2 Tax=Marinob... 229 8e-59 UniRef50_C6E9G2 UvrABC system protein C n=3 Tax=Geobacter RepID=... 229 9e-59 UniRef50_Q0B0A0 UvrABC system protein C n=1 Tax=Syntrophomonas w... 229 9e-59 UniRef50_C6NVW4 DNA polymerase III epsilon subunit n=1 Tax=Acidi... 229 9e-59 UniRef50_C1SGC9 Excinuclease ABC, C subunit n=1 Tax=Denitrovibri... 229 9e-59 UniRef50_C1FMJ8 UvrABC system protein C n=14 Tax=Clostridium Rep... 229 1e-58 UniRef50_C5BV40 UvrABC system protein C n=16 Tax=Actinomycetales... 228 1e-58 UniRef50_C1A8T0 UvrABC system protein C n=1 Tax=Gemmatimonas aur... 228 2e-58 UniRef50_D1BHL1 Excinuclease ABC subunit C n=16 Tax=Actinomyceta... 228 2e-58 UniRef50_C7H041 Excinuclease ABC subunit C n=1 Tax=Eubacterium s... 227 2e-58 UniRef50_A0L8U4 Excinuclease ABC subunit C n=1 Tax=Magnetococcus... 227 3e-58 UniRef50_B3WE47 UvrABC system protein C n=33 Tax=Bacilli RepID=U... 227 3e-58 UniRef50_B3EU62 Excinuclease ABC, C subunit n=2 Tax=Candidatus A... 227 3e-58 UniRef50_B2FK26 UvrABC system protein C n=29 Tax=Proteobacteria ... 227 4e-58 UniRef50_UPI0001C41B0D excinuclease ABC C subunit UvrC n=1 Tax=M... 227 5e-58 UniRef50_D0WMS6 Excinuclease ABC subunit C n=1 Tax=Actinomyces s... 227 5e-58 UniRef50_Q4FPI1 UvrABC system protein C n=3 Tax=Candidatus Pelag... 227 5e-58 UniRef50_A1ZTX2 Excinuclease ABC, C subunit n=4 Tax=Bacteroidete... 227 5e-58 UniRef50_Q2NGT2 UvrABC system protein C n=4 Tax=Methanobacteriac... 226 5e-58 UniRef50_C0GMH4 Excinuclease ABC, C subunit n=1 Tax=Desulfonatro... 226 6e-58 UniRef50_A1WLD5 UvrABC system protein C n=17 Tax=Burkholderiales... 226 7e-58 UniRef50_B7K124 Excinuclease ABC, C subunit n=5 Tax=Cyanobacteri... 226 7e-58 UniRef50_B5EPN1 Excinuclease ABC, C subunit n=2 Tax=Acidithiobac... 226 8e-58 UniRef50_B8FHR2 UvrABC system protein C n=1 Tax=Desulfatibacillu... 225 9e-58 UniRef50_C5CDH0 Excinuclease ABC, C subunit n=1 Tax=Kosmotoga ol... 225 9e-58 UniRef50_C6X0K5 Excinuclease ABC subunit C n=9 Tax=Bacteroidetes... 225 1e-57 UniRef50_D1R706 Putative uncharacterized protein n=1 Tax=Parachl... 225 1e-57 UniRef50_A0AGX5 Complete genome n=3 Tax=Listeria RepID=A0AGX5_LISW6 225 1e-57 UniRef50_C4FUE0 Putative uncharacterized protein n=1 Tax=Catonel... 225 1e-57 UniRef50_D2RB48 Excinuclease ABC, C subunit n=1 Tax=Gardnerella ... 225 1e-57 UniRef50_B4RF25 UvrC, excinuclease ABC, C subunit n=1 Tax=Phenyl... 225 1e-57 UniRef50_C5NYN4 Excinuclease ABC subunit C n=1 Tax=Gemella haemo... 225 1e-57 UniRef50_Q313T1 UvrABC system protein C n=2 Tax=Desulfovibrio de... 225 1e-57 UniRef50_A8ZVJ2 Excinuclease ABC, C subunit n=1 Tax=Desulfococcu... 225 2e-57 UniRef50_A5UY12 Excinuclease ABC subunit C n=5 Tax=Chloroflexace... 225 2e-57 UniRef50_UPI000050F72E excinuclease ABC subunit C n=1 Tax=Brevib... 225 2e-57 UniRef50_B8DRE6 Excinuclease ABC, C subunit n=1 Tax=Desulfovibri... 225 2e-57 UniRef50_C9RQJ8 Excinuclease ABC, C subunit n=1 Tax=Fibrobacter ... 225 2e-57 UniRef50_Q01S04 UvrABC system protein C n=2 Tax=Acidobacteria Re... 225 2e-57 UniRef50_A9WT69 UvrABC system protein C n=2 Tax=Actinobacteria (... 225 2e-57 UniRef50_Q1Q607 Similar to uvrABC system protein C (UvrC exinucl... 225 2e-57 UniRef50_Q3IYX6 UvrABC system protein C n=23 Tax=Alphaproteobact... 224 3e-57 UniRef50_Q1MQH2 UvrABC system protein C n=3 Tax=Desulfovibrionac... 224 3e-57 UniRef50_B3DRV5 UvrABC system protein C n=18 Tax=Bifidobacterium... 224 4e-57 UniRef50_C7LYI3 Excinuclease ABC, C subunit n=1 Tax=Acidimicrobi... 224 4e-57 UniRef50_Q04EZ7 UvrABC system protein C n=42 Tax=Lactobacillales... 224 4e-57 UniRef50_C4XSA3 UvrABC system protein C n=1 Tax=Desulfovibrio ma... 223 7e-57 UniRef50_Q1D921 UvrABC system protein C n=2 Tax=Cystobacterineae... 222 1e-56 UniRef50_D2L1M6 Excinuclease ABC, C subunit n=1 Tax=Desulfovibri... 222 1e-56 UniRef50_B6AR33 Excinuclease ABC, C subunit (UvrC) n=3 Tax=Lepto... 222 2e-56 UniRef50_Q2RS75 UvrABC system protein C n=13 Tax=Alphaproteobact... 222 2e-56 UniRef50_Q1AUH1 UvrABC system protein C n=1 Tax=Rubrobacter xyla... 221 2e-56 UniRef50_B7RUJ0 GIY-YIG catalytic domain protein n=1 Tax=marine ... 221 2e-56 UniRef50_B2RM62 UvrABC system protein C n=4 Tax=Bacteroidetes Re... 221 2e-56 UniRef50_B0VH58 Excinuclease ABC, C subunit n=1 Tax=Candidatus C... 221 2e-56 UniRef50_B2I637 UvrABC system protein C n=15 Tax=Xanthomonadacea... 221 2e-56 UniRef50_D2LI59 Excinuclease ABC, C subunit n=1 Tax=Rhodomicrobi... 221 2e-56 UniRef50_B0SB16 UvrABC system protein C n=6 Tax=Leptospira RepID... 221 3e-56 UniRef50_C3XLG8 Excinuclease abc subunit c n=1 Tax=Helicobacter ... 220 3e-56 UniRef50_B8DGB7 UvrABC system protein C (Protein UvrC) (Excinucl... 220 4e-56 UniRef50_D0LVJ3 Excinuclease ABC, C subunit n=1 Tax=Haliangium o... 220 4e-56 UniRef50_Q1IZB2 UvrABC system protein C n=4 Tax=Deinococcus RepI... 220 4e-56 UniRef50_B5YF86 UvrABC system protein C n=2 Tax=Dictyoglomus Rep... 220 4e-56 UniRef50_C0QWI5 Excinuclease ABC, C subunit n=2 Tax=Brachyspira ... 220 4e-56 UniRef50_B6INU7 Excinuclease ABC, C subunit, putative n=18 Tax=c... 220 5e-56 UniRef50_UPI0001977D11 excinuclease ABC subunit C n=1 Tax=Helico... 220 5e-56 UniRef50_B9LUM9 UvrABC system protein C n=9 Tax=Halobacteriaceae... 220 6e-56 UniRef50_B9Z6P2 DNA polymerase III, epsilon subunit n=2 Tax=Chro... 220 6e-56 UniRef50_A8SNK4 Putative uncharacterized protein n=1 Tax=Parvimo... 220 6e-56 UniRef50_Q21AW5 UvrABC system protein C n=89 Tax=Alphaproteobact... 219 7e-56 UniRef50_C7RAS4 Excinuclease ABC, C subunit n=1 Tax=Kangiella ko... 219 7e-56 UniRef50_Q5P3L6 Nuclease subunit Cho of the excinuclease complex... 219 8e-56 UniRef50_C9R9D0 Excinuclease ABC, C subunit n=1 Tax=Ammonifex de... 219 9e-56 UniRef50_Q26GF0 Excinuclease ABC, C subunit n=5 Tax=cellular org... 219 1e-55 UniRef50_C0QET6 UvrABC system protein C n=2 Tax=Desulfobacterace... 219 1e-55 UniRef50_O26541 UvrABC system protein C n=1 Tax=Methanothermobac... 219 1e-55 UniRef50_C6XFB9 Excinuclease ABC subunit C n=1 Tax=Candidatus Li... 219 1e-55 UniRef50_A8ESX8 UvrABC system protein C n=26 Tax=Epsilonproteoba... 218 2e-55 UniRef50_C8QX27 Excinuclease ABC, C subunit n=1 Tax=Desulfurivib... 218 2e-55 UniRef50_Q255T2 UvrABC system protein C n=17 Tax=Chlamydiaceae R... 218 2e-55 UniRef50_B5E2L2 UvrABC system protein C n=268 Tax=Bacilli RepID=... 218 2e-55 UniRef50_A5M6P1 Excinuclease ABC subunit C n=1 Tax=Streptococcus... 218 2e-55 UniRef50_Q2G9G8 UvrABC system protein C n=2 Tax=Sphingomonadales... 218 2e-55 UniRef50_C8X3R4 Excinuclease ABC, C subunit n=1 Tax=Desulfohalob... 218 2e-55 UniRef50_A9NEZ8 Excinuclease ABC, subunit C n=1 Tax=Acholeplasma... 216 6e-55 UniRef50_A8GP33 UvrABC system protein C n=14 Tax=Rickettsia RepI... 216 6e-55 UniRef50_C9M9X8 Excinuclease ABC, C subunit n=1 Tax=Jonquetella ... 216 7e-55 UniRef50_A2RLW6 UvrABC system protein C n=11 Tax=Bacilli RepID=U... 215 1e-54 UniRef50_C2KQB5 Excinuclease ABC subunit C n=2 Tax=Mobiluncus mu... 215 2e-54 UniRef50_Q3M542 UvrABC system protein C n=11 Tax=Cyanobacteria R... 215 2e-54 UniRef50_B3E0M3 Excinuclease ABC subunit C n=1 Tax=Methylacidiph... 215 2e-54 UniRef50_D1PLG8 Excinuclease ABC subunit C n=3 Tax=Ruminococcace... 215 2e-54 UniRef50_UPI0001C3237F excinuclease ABC, C subunit n=1 Tax=Conex... 214 2e-54 UniRef50_A8GXA7 Excinuclease ABC subunit C n=2 Tax=Rickettsia be... 214 3e-54 UniRef50_B9M422 UvrABC system protein C n=8 Tax=Desulfuromonadal... 214 3e-54 UniRef50_B7J223 UvrABC system protein C n=22 Tax=Borrelia RepID=... 214 3e-54 UniRef50_Q2FPC6 UvrABC system protein C n=16 Tax=Archaea RepID=U... 214 4e-54 UniRef50_Q6AKB8 UvrABC system protein C n=3 Tax=Deltaproteobacte... 214 4e-54 UniRef50_Q14NX3 Putative uvrc protein excinuclease abc subunit c... 214 4e-54 UniRef50_A6NZD4 Putative uncharacterized protein n=1 Tax=Bactero... 213 5e-54 UniRef50_Q5GSR4 UvrABC system protein C n=10 Tax=Wolbachia RepID... 213 6e-54 UniRef50_A7HD93 UvrABC system protein C n=5 Tax=Bacteria RepID=U... 212 8e-54 UniRef50_C1F4W9 UvrABC system protein C n=1 Tax=Acidobacterium c... 212 9e-54 UniRef50_D1Y7G8 Excinuclease ABC, C subunit n=1 Tax=Pyramidobact... 212 1e-53 UniRef50_UPI0000E87CD9 excinuclease ABC, C subunit n=1 Tax=Methy... 212 1e-53 UniRef50_A9EYQ9 Excinuclease ABC, subunit C n=1 Tax=Sorangium ce... 211 2e-53 UniRef50_Q7V7L7 UvrABC system protein C n=43 Tax=Cyanobacteria R... 210 4e-53 UniRef50_Q7UPD6 Excinuclease ABC subunit C n=5 Tax=Planctomyceta... 209 9e-53 UniRef50_D2MQ80 Excinuclease ABC, C subunit n=7 Tax=Bacteria Rep... 208 2e-52 UniRef50_D0RRP8 Excinuclease ABC subunit C n=1 Tax=alpha proteob... 208 2e-52 UniRef50_B0MPX2 Putative uncharacterized protein n=1 Tax=Eubacte... 207 4e-52 UniRef50_B8FTB6 Excinuclease ABC C subunit domain protein n=2 Ta... 207 4e-52 UniRef50_B2S367 UvrABC system protein C n=4 Tax=Treponema RepID=... 207 4e-52 UniRef50_C0QPW8 Excinuclease ABC subunit C n=5 Tax=Aquificales R... 207 5e-52 UniRef50_D2RRA5 Excinuclease ABC, C subunit n=2 Tax=Halobacteria... 207 5e-52 UniRef50_B9XGZ6 Excinuclease ABC C subunit domain protein n=2 Ta... 206 6e-52 UniRef50_C3XEM6 Excinuclease ABC subunit C n=1 Tax=Helicobacter ... 205 1e-51 UniRef50_C4K987 DNA polymerase III, epsilon subunit n=1 Tax=Thau... 205 1e-51 UniRef50_C7RR73 DNA polymerase III, epsilon subunit n=1 Tax=Cand... 205 2e-51 UniRef50_D2R0D2 Excinuclease ABC C subunit domain protein n=1 Ta... 204 4e-51 UniRef50_A9BGW2 UvrABC system protein C n=1 Tax=Petrotoga mobili... 204 4e-51 UniRef50_C7N8N1 Excinuclease ABC, C subunit n=12 Tax=Fusobacteri... 203 6e-51 UniRef50_B9KXM0 DNA polymerase III, epsilon subunit n=2 Tax=Ther... 202 1e-50 UniRef50_A8FMV1 UvrABC system protein C n=22 Tax=Campylobacter R... 202 1e-50 UniRef50_C7N5B1 Excinuclease ABC, C subunit n=6 Tax=Coriobacteri... 200 3e-50 UniRef50_Q7VK73 UvrABC system protein C n=2 Tax=Helicobacter Rep... 200 4e-50 UniRef50_C1DBV5 Probable DNA-directed DNA polymerase III n=1 Tax... 200 4e-50 UniRef50_B3QSB2 DNA polymerase III, epsilon subunit n=1 Tax=Chlo... 200 5e-50 UniRef50_D2ML33 Excinuclease ABC, C subunit n=1 Tax=Candidatus P... 200 6e-50 UniRef50_Q8REL0 UvrABC system protein C n=10 Tax=Bacteria RepID=... 199 7e-50 UniRef50_D1N623 Excinuclease ABC, C subunit n=1 Tax=Victivallis ... 199 1e-49 UniRef50_A9A4M1 Excinuclease ABC, C subunit n=2 Tax=Thaumarchaeo... 198 1e-49 UniRef50_D1B5F2 Excinuclease ABC, C subunit n=2 Tax=Synergistace... 198 2e-49 UniRef50_C5RNQ3 Excinuclease ABC C subunit domain protein n=1 Ta... 197 3e-49 UniRef50_Q2SSM4 UvrABC system protein C n=5 Tax=Mollicutes RepID... 197 4e-49 UniRef50_C8WI08 Excinuclease ABC, C subunit n=3 Tax=Coriobacteri... 197 6e-49 UniRef50_A1SLE5 DNA polymerase III, epsilon subunit n=5 Tax=Acti... 196 7e-49 UniRef50_A0LZ46 Exonuclease family protein n=14 Tax=Bacteroidete... 195 1e-48 UniRef50_A5KSN0 Excinuclease ABC, C subunit domain protein n=2 T... 195 1e-48 UniRef50_B4U9X0 UvrABC system protein C n=3 Tax=Aquificaceae Rep... 195 1e-48 UniRef50_A6M201 Excinuclease ABC, C subunit domain protein n=5 T... 195 2e-48 UniRef50_A7HJI0 UvrABC system protein C n=3 Tax=Thermotogaceae R... 194 3e-48 UniRef50_Q2NJ78 UvrABC system protein C n=3 Tax=Candidatus Phyto... 194 4e-48 UniRef50_A9DMS8 DNA polymerase III, epsilon subunit n=1 Tax=Kord... 193 5e-48 UniRef50_P47448 UvrABC system protein C n=2 Tax=Mycoplasma RepID... 193 6e-48 UniRef50_Q2GJJ1 UvrABC system protein C n=6 Tax=Anaplasma RepID=... 193 6e-48 UniRef50_A8F4P7 UvrABC system protein C n=6 Tax=Thermotogaceae R... 192 1e-47 UniRef50_B5Y9S9 Excinuclease ABC, C subunit n=1 Tax=Coprothermob... 192 1e-47 UniRef50_A7GIE5 GIY-YIG domain protein n=10 Tax=Clostridium RepI... 191 2e-47 UniRef50_Q7NBC4 UvrABC system protein C n=1 Tax=Mycoplasma galli... 191 3e-47 UniRef50_Q6SI31 Excinuclease ABC, C subunit n=1 Tax=uncultured m... 191 3e-47 UniRef50_Q83NI9 UvrABC system protein C n=2 Tax=Tropheryma whipp... 190 4e-47 UniRef50_Q8EWS6 UvrABC system protein C n=1 Tax=Mycoplasma penet... 190 5e-47 Sequences not found previously or not previously below threshold: UniRef50_Q47Z18 UvrABC system protein C n=274 Tax=Gammaproteobac... 224 2e-57 >UniRef50_P59439 Excinuclease cho n=116 Tax=Gammaproteobacteria RepID=CHO_ECOL6 Length = 295 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 287/295 (97%), Positives = 293/295 (99%) Query: 1 MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSR 60 MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKS+NIRSR Sbjct: 1 MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSINIRSR 60 Query: 61 VLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ 120 VLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ Sbjct: 61 VLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ 120 Query: 121 LNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA 180 LNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA Sbjct: 121 LNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA 180 Query: 181 CFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQ 240 CFRSALKRCAGACCGKESH++HALRLRQSLERLRVVCWPW+GAVALKEQHPEMTQYHIIQ Sbjct: 181 CFRSALKRCAGACCGKESHDDHALRLRQSLERLRVVCWPWKGAVALKEQHPEMTQYHIIQ 240 Query: 241 NWLWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRAS 295 NWLWLGAVNSL+EATTLIR PAGFDHDGYKILCKPLLSGNYEITELDP NDQ+AS Sbjct: 241 NWLWLGAVNSLKEATTLIRAPAGFDHDGYKILCKPLLSGNYEITELDPVNDQQAS 295 >UniRef50_B1XZE9 Excinuclease ABC C subunit domain protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XZE9_LEPCP Length = 275 Score = 280 bits (717), Expect = 4e-74, Method: Composition-based stats. Identities = 137/271 (50%), Positives = 170/271 (62%), Gaps = 11/271 (4%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRISWICT 85 L LP+ PGVYLFHGES +PLYIGKSVNIRSRVLSHLR P EA ML Q+RR++WI T Sbjct: 6 EDLRALPSAPGVYLFHGES-ALPLYIGKSVNIRSRVLSHLREPGEARMLLQTRRVTWIRT 64 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDV----VYAKEVDFSRAPN 141 AGEIGALLLE+RLIK QQPL+NK+LRR+R+LC+ + + V VY+++VDF+ Sbjct: 65 AGEIGALLLESRLIKAQQPLYNKQLRRSRELCSWRFCGSQPAVAPALVYSRDVDFAVTDG 124 Query: 142 LFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEE 201 LFGLF + AA L A +LC LGLEP +R R CF L RC G C G+ES Sbjct: 125 LFGLFRSAHAAKDFLIDTAQAHRLCLVALGLEPATR-RGCFGLQLGRCDGVCVGRESAAS 183 Query: 202 HALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLW-----LGAVNSLEEATT 256 HALR+ Q+L + V WP+ GAV L E+ + Q H+++NW +G Sbjct: 184 HALRVAQALAQCAVQRWPFPGAVGLVERDGDWVQTHVVRNWRHERTLDVGGAQDARPPLA 243 Query: 257 LIRTPAGFDHDGYKILCKPLLSGNYEITELD 287 AGFD D Y+IL KPLL G E L+ Sbjct: 244 DPGAGAGFDLDAYRILVKPLLDGGCERIHLE 274 >UniRef50_C1DM13 Excinuclease ABC protein, subunit C n=1 Tax=Azotobacter vinelandii DJ RepID=C1DM13_AZOVD Length = 282 Score = 276 bits (707), Expect = 5e-73, Method: Composition-based stats. Identities = 145/273 (53%), Positives = 188/273 (68%), Gaps = 3/273 (1%) Query: 15 AAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAML 74 A +YEYPEHLR + +P PGVYLF+G+SD++PLYIGKSV+IR+R+L+HLRTP+EA +L Sbjct: 11 AELYEYPEHLRERIASMPKAPGVYLFYGDSDSLPLYIGKSVDIRARLLAHLRTPEEARLL 70 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEV 134 RQ+RRI I TAGEIGALLLE+RLIKE QPL+NKRLR R+L +++L + R +VV A V Sbjct: 71 RQTRRIEHIRTAGEIGALLLESRLIKELQPLYNKRLRCQRRLYSIRLADGRPEVVEA--V 128 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 R L+GLF +RR A + L +AD +LC GLLGLE GRACFR+ + RCAGAC Sbjct: 129 PPDREQALYGLFRSRRVAGERLLEMADRHRLCLGLLGLERHEPGRACFRTQIGRCAGACA 188 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 G+ESHE HA RL +L ++ CWP+ G VAL E + YH++ W +LG SL+ A Sbjct: 189 GRESHEAHAARLLAALTEWQLFCWPYPGPVALHEHGEGLRDYHVVDRWHFLGTYASLKAA 248 Query: 255 TTLIRTP-AGFDHDGYKILCKPLLSGNYEITEL 286 P FD D Y+IL +P+L G + L Sbjct: 249 RKAPAGPLPRFDADSYQILLRPILQGGAGVVPL 281 >UniRef50_Q3SKJ9 DNA polymerase III, epsilon subunit n=4 Tax=Proteobacteria RepID=Q3SKJ9_THIDA Length = 470 Score = 276 bits (706), Expect = 7e-73, Method: Composition-based stats. Identities = 118/283 (41%), Positives = 163/283 (57%), Gaps = 16/283 (5%) Query: 19 EYPEHLR-SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAM 73 P HL + L DLP PGVYLF+GE+D + LY+GKSVN+R RV SH R + Sbjct: 189 ALPPHLDPALLEDLPESPGVYLFYGEND-VLLYVGKSVNLRQRVFSHFAADTREYKAMQL 247 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK-----RVDV 128 +Q RR+ W T GE+GALLLE+RLIKE P N+RLRR +LCA +L+E R + Sbjct: 248 TQQVRRVEWRETVGELGALLLESRLIKEGAPAHNRRLRRASELCAWRLDEVAPGDFRPVL 307 Query: 129 VYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR-GRACFRSALK 187 V A + DF R +LFG F++RR A AL+ IAD +LC +LGLE +R CF ++ Sbjct: 308 VTADDPDFGRDGDLFGPFSSRRQATLALRKIADAHQLCPVVLGLEKPARPDSPCFAFQVQ 367 Query: 188 RCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHP--EMTQYHIIQNWLWL 245 +C GAC GKE+ H+ RL +L + ++ W + GA+ L E+ ++ + H++ W +L Sbjct: 368 KCRGACAGKETAGLHSARLMAALAKTKMKSWAYPGAIGLVERDDFLDVEEVHVVHAWRYL 427 Query: 246 GAVNSLEEATTLIRTPAG--FDHDGYKILCKPLLSGNYEITEL 286 G S E L+ A FD D YK+L L + I L Sbjct: 428 GTAKSEAEIGELLEHAARAPFDLDTYKLLKTQLAKSKFTIRAL 470 >UniRef50_Q3BWL1 Excinuclease subunit n=5 Tax=Xanthomonas RepID=Q3BWL1_XANC5 Length = 287 Score = 276 bits (705), Expect = 9e-73, Method: Composition-based stats. Identities = 125/271 (46%), Positives = 181/271 (66%) Query: 18 YEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQS 77 Y YPEHLR + LP GVY FHG+ +PLYIGKSVN+R+RV+ H RT +EA++LRQ+ Sbjct: 17 YAYPEHLRDCVEALPKTAGVYTFHGKEGLLPLYIGKSVNVRTRVMDHCRTLEEASLLRQT 76 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 +S I AG+ GA LLEA+++K Q PL+NK LR+ + +++L V +V++ E D + Sbjct: 77 TSVSCIPMAGDTGARLLEAQMVKRQMPLYNKLLRKVPRQFSIRLYRGEVSIVHSAEYDVA 136 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 +P L+GL+++ ++A ++L+ IAD+ +LCY L+GLE L GR CFR+ LKRCAGAC G E Sbjct: 137 SSPMLYGLYSSPQSAQKSLRRIADDHRLCYALVGLERLPSGRPCFRAMLKRCAGACSGGE 196 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + ++H RLR +L RL + WP+ G +AL+E+ + Q H++ W +LG V +L A L Sbjct: 197 TLDDHEERLRAALIRLELSTWPFHGRIALEEKGENLRQLHVLDAWHYLGTVTTLTAARKL 256 Query: 258 IRTPAGFDHDGYKILCKPLLSGNYEITELDP 288 P GFD D Y+I+ + SG IT L P Sbjct: 257 KGEPLGFDRDSYRIIRAAIESGLDAITVLGP 287 >UniRef50_Q21VB4 DNA polymerase III, epsilon subunit n=7 Tax=Betaproteobacteria RepID=Q21VB4_RHOFD Length = 476 Score = 274 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 114/289 (39%), Positives = 167/289 (57%), Gaps = 19/289 (6%) Query: 20 YPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLR 75 P L + + D+P GVY+F+GE +PLYIGKS+ +RSRVL+H R P E M + Sbjct: 186 LPPQLETRVADIPESVGVYIFYGE-GPLPLYIGKSIKLRSRVLAHFQAASRAPREMRMAQ 244 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-----VDVVY 130 + RRI W+ TAGEIGALLLEARL+KE+QP +N+RLRR LCA +L + + +V Sbjct: 245 EIRRIEWLETAGEIGALLLEARLVKERQPAYNRRLRRESTLCAWRLADDPLARPLLSLVR 304 Query: 131 AKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCA 190 + + ++G++ ++ AL +L+ +AD Q LC LGLE +GR CF + RC Sbjct: 305 GEALQPQEFGQMYGVYRSKNQALSSLRELADSQGLCLQALGLE-SGKGR-CFAHQIGRCQ 362 Query: 191 GACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQH--PEMTQYHIIQNWLWLGAV 248 G CCG+ES E H LRL+ +L + +++ WP+ G V L+E + E T HI W L V Sbjct: 363 GVCCGEESPERHHLRLQLALAQQKLLVWPYPGKVGLREYNARSERTDIHIFDQWCHLATV 422 Query: 249 NSLEEATTLIRTPA--GFDHDGYKILCKPLL---SGNYEITELDPANDQ 292 + E T + + + FD D Y++L K + G +E+ + Q Sbjct: 423 HDETELTDALGSRSTLAFDLDTYRLLLKHIAAPGKGKFELIDWTEKQQQ 471 >UniRef50_D0L0M1 DNA polymerase III, epsilon subunit n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0M1_HALNC Length = 481 Score = 272 bits (697), Expect = 7e-72, Method: Composition-based stats. Identities = 103/280 (36%), Positives = 144/280 (51%), Gaps = 12/280 (4%) Query: 20 YPEHLR-SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAAML 74 P HL ++++P PGVYL +G+ +PLYIGKS+++R RVL H R E + Sbjct: 200 LPPHLAPERIDEIPDTPGVYLMYGD-GALPLYIGKSIHLRRRVLDHFRNDHREQKEMRLA 258 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEV 134 + + I WI T GE+ ALLLE+RLIK PLFN++LRR R LC V Sbjct: 259 QAVQHIDWIETPGELSALLLESRLIKTLSPLFNRKLRRTRDLCTWHWVFGNVQPPRLLRG 318 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 D + +G F + A Q L+ +A + LC LGL+ S CF +KRC G C Sbjct: 319 DDVIPGSCYGPFRHATQAKQVLRELAAKHGLCDIRLGLQSGSG--PCFAHQIKRCRGVCV 376 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEM-TQYHIIQNWLWLGAVNSLEE 253 G+ES +H LRL +LE LR+ WP+ G V L E +H+I W+ G ++ E Sbjct: 377 GQESPMQHDLRLATALEELRIKQWPYDGPVVLHESDDHTGASWHVIDQWVHWGTAHNEAE 436 Query: 254 ATTLIRTP-AGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 ++ P FD D Y IL + L +T L +D+ Sbjct: 437 LDAVLEHPRPNFDRDTYLILLRHL--DPARVTPLSSRSDR 474 >UniRef50_Q1LGD6 DNA polymerase III, epsilon subunit n=5 Tax=cellular organisms RepID=Q1LGD6_RALME Length = 530 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 106/275 (38%), Positives = 157/275 (57%), Gaps = 9/275 (3%) Query: 20 YPEHLRSF-LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAML 74 P L L+D+P RPGVYLF+G+ D +PLY+GKS+++R R+ +H E + Sbjct: 214 LPAGLEEAALDDVPDRPGVYLFYGDDD-VPLYVGKSIHLRQRIRAHFAGDHSNAREMRLS 272 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK-RVDVVYA-K 132 R RR+ W T GEIGALL EA L+K +PL N LR+N +L + ++ + + + + Sbjct: 273 RSVRRVEWRETGGEIGALLSEAHLVKTLRPLHNHLLRQNTELFSWEMLDGLPAPRLRSDR 332 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL-SRGRACFRSALKRCAG 191 VDFSR L+G F +R +A L+++ADE +LC L LE RG CF L RCAG Sbjct: 333 HVDFSRHAALYGAFPSRASAQARLRSLADEHRLCLATLMLEGTTRRGSPCFARQLHRCAG 392 Query: 192 ACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSL 251 AC G+ES H R +++ + + WP+ GA+A +E + +HII++W +LG+ +L Sbjct: 393 ACTGEESQTAHRERTVEAMASMAIQRWPFAGAIAWREASGDRFPWHIIEDWCYLGSAPTL 452 Query: 252 EEATTLIRTPAGFDHDGYKILCKPLLSGNYEITEL 286 E+A + PA FD D Y+IL + L Sbjct: 453 EDAARQLVAPARFDIDTYQILAPRIEELKASAVPL 487 >UniRef50_C7RVE9 Exonuclease RNase T and DNA polymerase III n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVE9_9PROT Length = 469 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 115/285 (40%), Positives = 166/285 (58%), Gaps = 17/285 (5%) Query: 20 YPEHLR-SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAML 74 P HL + L+DLP PGVYLF+G++D + LY+GKSVN+R RV +H R E + Sbjct: 185 LPPHLDSALLDDLPESPGVYLFYGDNDAL-LYVGKSVNLRQRVRAHFASDLREYKEMRLS 243 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-----NEKRVDVV 129 ++ RR+ W T GE+GALLLE+RLIKE QP+ N RLRR+ LC QL + R+ +V Sbjct: 244 QEVRRLRWQETVGELGALLLESRLIKECQPIHNHRLRRSSDLCTWQLVQVAPGDCRLRLV 303 Query: 130 YAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLE-PLSRGRACFRSALKR 188 + DF R+ +LFGLFANRR A +L+ +A LC +LGLE P GR CF +K Sbjct: 304 SGQTADFVRSNDLFGLFANRREATDSLRKVAAANGLCPIILGLEKPAGPGRPCFSHQVKH 363 Query: 189 CAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHP--EMTQYHIIQNWLWLG 246 C GAC GKE+ H+ R+ +L +L++ WP+ GA+ + E+ + + H++ W LG Sbjct: 364 CRGACVGKEAIGVHSDRMLSALMKLKLTAWPYPGAIGVVERDDLRRVEEVHVVNGWRHLG 423 Query: 247 AVNSLEEATTLIRTPAG---FDHDGYKILCKPLLSGNYEITELDP 288 + S ++ +G FD D Y++L L G ++ L Sbjct: 424 SARSEVGVQEILLGQSGQGRFDRDTYRLLAAHLGKGRVQVRLLTE 468 >UniRef50_A4XIQ3 UvrABC system protein C n=2 Tax=Clostridia RepID=UVRC_CALS8 Length = 593 Score = 257 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 15/241 (6%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAAMLRQSR 78 L+ L +LPT PGVY+ E+ + +Y+GK+VN+R+RV + + P M+++ + Sbjct: 3 TLQEKLANLPTTPGVYMMKDENGKV-IYVGKAVNLRNRVRQYFQNSDMTPKTRLMVKKIK 61 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 +I T E+ AL+LE LIKE +P +N LR ++ +++ + + Sbjct: 62 DFEYIVTDTEVEALILECNLIKEYRPKYNVLLRDDKNYQYIKITNEMFPRLVTTRKVEKD 121 Query: 139 APNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 FG + + + Q ++ + + C + L +GR C ++RC G C G Sbjct: 122 GAKYFGPYVSGYSVKQTIELLKSLFMLRTCKRKFP-DQLGKGRPCLNFYIERCLGVCKGD 180 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 EE+ + ++++ L G ++E +M +Y N ++ A + T+ Sbjct: 181 IPEEEYQKLVEKAVKVLSGK-----GDEIVEELKKKMFEYA--DNLMFEKAQEIKNKITS 233 Query: 257 L 257 L Sbjct: 234 L 234 >UniRef50_B7AWB5 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AWB5_9BACE Length = 640 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 13/256 (5%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQS 77 + L LP++PGVY+ H ++D + +YIGK+V++++RV + ++ M+ Sbjct: 3 DIEEELKKLPSKPGVYIMHDKTDAI-IYIGKAVSLKNRVRQYFQSSRNLSVKIQHMVSNI 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDF 136 +I T E+ AL+LE LIKE +P +N L+ ++ +++ ++ V Sbjct: 62 DHFEYIITDSELEALVLECNLIKEHRPKYNTMLKDDKSYPFIKVTVNEKYPRVLFARSMK 121 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGACC 194 FG + + A ++ + ++ C L + + R C + +C+ C Sbjct: 122 KDKSRYFGPYTSAGAVKDTIELLCRLYRIRTCSRKLPADMC-KDRPCLNYHINQCSAPCQ 180 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQH-PEMTQYHIIQNWLWLGAVNSLEE 253 G S EE+ +RQ ++ L + K + +Y + L + Sbjct: 181 GYISEEEYKESVRQVIDFLNGNYSEILNKLKDKMMEASDKMEYEDAAQYRDLITSVK-QI 239 Query: 254 ATTLIRTPAGF-DHDG 268 A T + F D D Sbjct: 240 AQKQKITDSDFEDRDV 255 >UniRef50_A4SZE6 DNA polymerase III, epsilon subunit n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SZE6_POLSQ Length = 466 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 103/276 (37%), Positives = 152/276 (55%), Gaps = 16/276 (5%) Query: 17 IYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAA 72 P R ++ +P PG Y+F+G++ PLYIGKS+++R+RV+ H + E Sbjct: 188 PSLPPNIDRDLIDSIPDTPGCYIFYGDN-KTPLYIGKSISLRNRVMGHFQGALTQRKEMK 246 Query: 73 MLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAK 132 + Q R I WI T+GE+GAL+LE+RLIKE+ P N +LRR++ LC L E V+ + Sbjct: 247 LSLQIRDIDWIETSGELGALILESRLIKERMPSMNIKLRRSKDLCGWSLVEDESGVLLPQ 306 Query: 133 EVDFSR-----APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALK 187 V + NL+GLF ++R A L+ IA + LC LLGLE G++CF +K Sbjct: 307 LVTHHQLAPGLQENLYGLFYSKREAHSYLKAIAKKHHLCEALLGLEKRVEGKSCFGYQVK 366 Query: 188 RCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGA 247 +C GAC H L+L+ LE ++ WP+ G +A+KE + +I W +LG Sbjct: 367 QCGGACLNLTPITLHNLQLKTVLELFKIQVWPYSGPIAIKEGGEMI----VIDKWCYLGT 422 Query: 248 VNSLEEATTLIRT-PAGFDHDGYKILCKPLLSGNYE 282 + +E L + A FD D YKI+ K L SG Y+ Sbjct: 423 AINQDELYELAESGDAEFDLDIYKIVKKAL-SGAYK 457 >UniRef50_A3DJ07 UvrABC system protein C n=15 Tax=Bacteria RepID=UVRC_CLOTH Length = 625 Score = 252 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 104/245 (42%), Gaps = 17/245 (6%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQS 77 ++ L LP +PGVY+ E+ + +Y+GK+V +++RV + ++ P AM+ Sbjct: 3 DIQEELKKLPDKPGVYIMKDENGEI-IYVGKAVVLKNRVRQYFQSLSNQTPKVRAMVAHI 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDF 136 + +I T E+ AL+LE LIK+ +P FN L+ ++ +++ + + Sbjct: 62 KEFEYIVTDTELEALILECNLIKKHRPKFNILLKDDKNYPYIKVTMNEDFPRILMTRRVE 121 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 FG + + A + + + K C +L + +GR C + +C G C Sbjct: 122 KDGAKYFGPYTSAYAVRETIDLVKKLFPVKTCSKVLP-RDIGKGRPCLNYHIYQCLGPCQ 180 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 G S EE+ ++ L +K+ +M + N + A ++ Sbjct: 181 GNVSKEEYRFMMQDVCNFLGGRQED-----IIKKLEKDMKEAA--DNLEFERAARIRDKI 233 Query: 255 TTLIR 259 +L Sbjct: 234 NSLKH 238 >UniRef50_Q3AFE5 UvrABC system protein C n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=UVRC_CARHZ Length = 607 Score = 252 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 20/246 (8%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQ 76 L + +LP PGVYL+ E + +Y+GK+ N+++RV S+ + P M+ + Sbjct: 1 MTLWEKVKNLPDSPGVYLYKDEKGEV-IYVGKAKNLKNRVRSYFQPPEKLLPKTRVMMEK 59 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 +R I I T+ E+ AL+LE LIK +P +N L+ ++ L++ + + Sbjct: 60 ARDIEVIITSTEVEALILEQNLIKRYRPRYNILLKDDKSYPYLKITGEEFPRLLITRRVV 119 Query: 137 SRAPNLFGLFANRRAALQA---LQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 + FG + + A + L++I + C + + R C +K+C+ C Sbjct: 120 NDGGRYFGPYPDAGALNETYKLLRSIFK-FRTCTPTIF---AQKKRPCLNFHIKKCSAPC 175 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 G+ S EE+ + ++ L +G +K+ EM N + A ++ Sbjct: 176 AGEISREEYFKEIEMVVDFLEG-----RGENLIKKLKKEMAIAS--DNLEFERAAKLRDQ 228 Query: 254 ATTLIR 259 L + Sbjct: 229 ILALEK 234 >UniRef50_A9B4F8 Excinuclease ABC, C subunit n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B4F8_HERA2 Length = 641 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 56/240 (23%), Positives = 101/240 (42%), Gaps = 13/240 (5%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQSR 78 L +LP PGVY++ +++T+ +Y+GKS ++R RV S+ P +++ Sbjct: 15 FEERLRNLPLSPGVYIYRDQANTI-IYVGKSKSLRDRVRSYFGAPRGLTSKTRRLVQNIA 73 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 +I T E+ ALLLE LIK+ +P +N L+ ++ +++ ++ V Sbjct: 74 DFEFITTDTELEALLLEMNLIKKHRPRYNVLLKDDKSYPYIKITKEAWPRVLRVRKVIED 133 Query: 139 APNLFGLFANRRAALQALQTIADE--QKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 FG FA + ++ + +LC + + R RAC +KRC G C Sbjct: 134 GGIYFGPFAKASSVYATIELLNKLFAFRLCNDDMFKKHERRNRACMYYDIKRCLGPCANN 193 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 + EE++ + Q L L++ +M Q + V +A Sbjct: 194 CTTEEYSTAINQVRLFLGGKPE-----AILRDLKVKMNQAAEDLQFERAAYVRDQIKAVE 248 >UniRef50_B2JFL2 Excinuclease ABC, C subunit n=2 Tax=Burkholderia RepID=B2JFL2_BURP8 Length = 740 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 64/269 (23%), Positives = 109/269 (40%), Gaps = 16/269 (5%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRI 80 + L LP PGVY ++ E + LY+GK+ +++ RV S+ +P A M+ + +I Sbjct: 41 KKVLRQLPHMPGVYRYYDEQGAV-LYVGKARDLKKRVSSYFTKTLLSPRIAMMVSRIAKI 99 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 T E ALLLE LIK P +N R ++ L+L + + + Sbjct: 100 ETTVTRSEAEALLLENNLIKALAPRYNILFRDDKSYPYLKLTGHQFPRMAYYRGSVDKKN 159 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG F + A +++Q + +L + +R R C + RC C G + E Sbjct: 160 QYFGPFPSAWAVRESIQILQRVFQLRTCEDSVFN-NRTRPCLLHQIGRCTAPCVGAVTEE 218 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS-LEEATTLIR 259 ++A + + L +KE +M + + AV + + +T++ Sbjct: 219 DYARDVSNASRFLLGRQSE-----VMKELEQKMHAFASELKFEQAAAVRNQMSSLSTVLH 273 Query: 260 TPA---GFDHDGYKILCKPLLSGNYEITE 285 A G D D IL L G + Sbjct: 274 QQAIEVGGDSDV-DILAVVALGGRVCVNL 301 >UniRef50_Q31GI3 UvrABC system protein C n=2 Tax=Bacteria RepID=UVRC_THICR Length = 613 Score = 249 bits (636), Expect = 9e-65, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 105/260 (40%), Gaps = 13/260 (5%) Query: 18 YEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAM 73 +E + +FL L RPGVYL + S + +Y+GK+ N++ RV S+ + + Sbjct: 5 FETQFDIDAFLKHLTERPGVYLMYDASGQI-IYVGKAKNLKRRVSSYFKKRHEEIKTETL 63 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAK 132 + Q I T E AL+LE LIK +P +N R ++ + + K+ + Sbjct: 64 VSQVASIEVTVTDTESEALILENTLIKRHKPRYNILFRDDKSYPYIFVSTGKKFPSLSYH 123 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCA 190 + FG F N A Q L + + C + R R C + +KRC+ Sbjct: 124 RGAKRKVGRYFGPFPNASAVHQTLHALQKIFPVRQCTESVF---NHRSRPCLQYQIKRCS 180 Query: 191 GACC-GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQH-PEMTQYHIIQNWLWLGAV 248 G C G + E+ ++ ++ L + ++ K Q + ++ + + Sbjct: 181 GPCVEGLVTEAEYNEDVQHTIAFLEGKSFDVIESLGHKMQQASDEFEFEKAALYRDKISA 240 Query: 249 NSLEEATTLIRTPAGFDHDG 268 ++ LI P D D Sbjct: 241 LRAIQSQHLINQPGSKDTDV 260 >UniRef50_Q2L1Q9 Excinuclease (Fragment) n=1 Tax=Bordetella avium 197N RepID=Q2L1Q9_BORA1 Length = 301 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 114/272 (41%), Positives = 168/272 (61%), Gaps = 12/272 (4%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRIS 81 + +R+ LP GVYL+ GE+ T+PLYIGKSV++R R LSHLRTP EAAM+RQ RR+ Sbjct: 11 QTVRALARTLPRSTGVYLYFGEA-TLPLYIGKSVDMRGRFLSHLRTPAEAAMMRQVRRVD 69 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-------EKRVDVVYAKEV 134 I TAGE+GALLLEA LIK++ PLFN+RLRR R+L L+L + R++ + + Sbjct: 70 CIETAGELGALLLEASLIKQRMPLFNQRLRRTRRLHVLRLASLACGGLQPRIEGLTGTPL 129 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 + A FGLF +R AA++ L+++A +LC GLLG+E + R CF L RC G C Sbjct: 130 ECEAAR--FGLFKSRSAAVEHLRSLAQAHELCLGLLGIERMG-SRGCFGLQLGRCRGVCV 186 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 G+E + H RL+++L+ LRV WP+ G + + E+ + Q H + +W +L S + Sbjct: 187 GREPRQTHDQRLQEALDALRVHAWPYAGPIRIVERAGDWVQSHEVHDWRYLHTDCSRQGR 246 Query: 255 TTLIRTPAGFDHDGYKILCKPLLSGNYEITEL 286 + FD D Y++L +P+L +I ++ Sbjct: 247 IGAGIQQS-FDADIYRLLVRPILEQQADIVQV 277 >UniRef50_C5ADA8 UvrABC system protein C (Protein uvrC) n=4 Tax=Proteobacteria RepID=C5ADA8_BURGB Length = 756 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 58/243 (23%), Positives = 99/243 (40%), Gaps = 12/243 (4%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRI 80 + L LP PGVY ++ + ++ LY+GK+ N++ RV S+ +P A M+ + RI Sbjct: 32 KPVLAQLPHLPGVYRYYDAAGSV-LYVGKARNLKKRVSSYFTKTQLSPRIAMMVTRIARI 90 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 T E ALLLE LIK P +N R ++ L+L + R Sbjct: 91 ETTVTRSEAEALLLENNLIKALAPRYNILFRDDKSYPYLKLTGHAFPRMAYYRGAVDRKN 150 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG F + A +++Q + +L + +R R C + RC+ C G Sbjct: 151 QYFGPFPSAWAVRESIQILQRVFQLRTCEDSVFN-NRTRPCLLHQIGRCSAPCVGAIDAA 209 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS-LEEATTLIR 259 ++A + + L +KE +M + + AV + + T++ Sbjct: 210 DYARDVANASRFLLGRQSE-----VMKELEQKMHGFAAELKFEQAAAVRNQMSSLATVLH 264 Query: 260 TPA 262 A Sbjct: 265 QQA 267 >UniRef50_A6SXR9 UvrABC system protein C n=19 Tax=Betaproteobacteria RepID=UVRC_JANMA Length = 618 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 106/255 (41%), Gaps = 17/255 (6%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQSRR 79 + + LP PGVY + D + LY+GK+ +++ RV S+ +P A M+ + R Sbjct: 13 VLETVAKLPNLPGVYRYFDAEDNL-LYVGKARDLKKRVSSYFLKNLASPRTALMVERIAR 71 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRA 139 + T E ALLLE LIK QP +N R ++ L++ + + + Sbjct: 72 LETTVTRSEAEALLLENNLIKTLQPRYNILFRDDKSYPYLKITGQEYPRMAYYRGAVDKK 131 Query: 140 PNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG F + A +++Q + + C + +R R C + RC+G C Sbjct: 132 NQYFGPFPSGWAVKESMQILQKVFLLRTCEDSVF---ANRTRPCLLHQIHRCSGPCVNFI 188 Query: 198 SHEEHALRLRQSLERLRV----VCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 S E++AL + + + LR V QG + + + Q +++N + S Sbjct: 189 SKEDYALDVENAAKFLRGRQSEVLETLQGKMLAYAEELKFEQAALVRNQI---NALSRVL 245 Query: 254 ATTLIRTPAGFDHDG 268 + T D D Sbjct: 246 HQQSMETGGDADIDI 260 >UniRef50_Q1LKN9 UvrABC system protein C n=32 Tax=Proteobacteria RepID=UVRC_RALME Length = 673 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 65/289 (22%), Positives = 109/289 (37%), Gaps = 18/289 (6%) Query: 6 TSPRLEFEAAAIYEYPEHL-RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSH 64 TSP E + + P R L +P PGVY + + LY+GK+ +++ RV S+ Sbjct: 13 TSP--ESDTPESSDAPAFDPRPILARMPGLPGVYRYFDADGNI-LYVGKARDLKKRVSSY 69 Query: 65 LR----TPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ 120 +P A M+ + RI E ALLLE LIK P +N R ++ L+ Sbjct: 70 FNKTQLSPRIAMMVAKIARIDTTVVRTEAEALLLENNLIKALAPRYNILFRDDKSYPFLR 129 Query: 121 LNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA 180 L + + R FG F + A +++Q + +L +R R Sbjct: 130 LTGHKFPRMAYYRGATDRKHQYFGPFPSAHAVRESMQILQKVFQLRTCE-DTVFNNRTRP 188 Query: 181 CFRSALKRCAGACCGKESHEEHALRLRQSLERLRV----VCWPWQGAVALKEQHPEMTQY 236 C + RC G C G S +++A + + L+ V Q + E Q Sbjct: 189 CLLHQIHRCTGPCVGAISEDDYARDVSNAARFLQGRETEVLEGLQSKMEAHAVQLEFEQA 248 Query: 237 HIIQNWLWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITE 285 +++ + + +A + D IL + G + Sbjct: 249 AAVRDQIAALSTVLKRQAVEEVGQARDID-----ILAVAVQGGRACVNL 292 >UniRef50_A3NXK5 UvrABC system protein C n=59 Tax=Proteobacteria RepID=UVRC_BURP0 Length = 747 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 97/245 (39%), Gaps = 11/245 (4%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRI 80 + L LP PGVY ++ D + LY+GK+ +++ RV S+ +P A M+ + RI Sbjct: 14 KPILAQLPHLPGVYRYYDAQDAV-LYVGKARDLKKRVSSYFTKTQLSPRIAMMITRIARI 72 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 T E ALLLE LIK P +N R ++ L+L R + + Sbjct: 73 ETTVTRSEAEALLLENNLIKALAPRYNILFRDDKSYPYLKLTGHRFPRMAYYRGAVDKKN 132 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG F + A +++Q + +L + +R R C + RC+ C G E Sbjct: 133 QYFGPFPSAWAVRESIQILQRVFQLRTCEDSVFN-NRTRPCLLHQIGRCSAPCVGAIGEE 191 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 ++A + + L G E +M + + AV + + + Sbjct: 192 DYARDVDNASRFLLGRQGEVMG-----ELERKMHAFAAELKFEQAAAVRNQMSSLAKVLH 246 Query: 261 PAGFD 265 D Sbjct: 247 QQAID 251 >UniRef50_A6BHR5 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHR5_9FIRM Length = 617 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 105/255 (41%), Gaps = 11/255 (4%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQS 77 +++ L LP +PGVYL H E D + +Y+GK++++++RV + ++ M+ Sbjct: 5 NIQEELKKLPGKPGVYLMHDEKDAI-IYVGKAISLKNRVRQYFQSSRNKGAKIEQMVTHI 63 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDF 136 R +I T E+ AL+LE LIKE +P +N L ++ +++ + V Sbjct: 64 SRFEYIVTDSELEALVLECNLIKEHRPKYNTMLMDDKTYPFIKVTVNEPFPRVMMARRMK 123 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGL-EPLSRGRACFRSALKRCAGACCG 195 FG + + A ++ I + L + + + R C + +C C G Sbjct: 124 KDKAKYFGPYTSTGAVKDTIELIRKLYHIRSCNRSLPKDIGKERPCLNYHIHQCYAPCQG 183 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQH-PEMTQYHIIQNWL-WLGAVNSLEE 253 S EE+ + + + L P + K E ++ + L +V + + Sbjct: 184 YISREEYRKSIDEVVRFLNGNYDPILKELEEKMLDASENLEFEKAIEYRELLASVQKIAQ 243 Query: 254 ATTLIRTPAGFDHDG 268 + T D D Sbjct: 244 KQKITDTAGD-DRDI 257 >UniRef50_B3R8V7 DNA polymerase III, epsilon subunit + GIY-YIG endonuclease (Modular protein) n=2 Tax=Burkholderiales RepID=B3R8V7_CUPTR Length = 532 Score = 247 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 111/262 (42%), Positives = 157/262 (59%), Gaps = 9/262 (3%) Query: 20 YPEHLRS-FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAML 74 P L L D+P PGVY+F+G+ D +PLY+GKSV++R R+ +H R + + Sbjct: 212 LPAGLEETALEDVPASPGVYIFYGDQD-VPLYVGKSVHLRQRIGAHFSGDYRYGKDMRLA 270 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK-RVDVVYA-K 132 R RR+ W T GE GALLLEA+L+K QP+ N+ LRRN +L A +L ++ V + + + Sbjct: 271 RLVRRVEWRETGGETGALLLEAQLVKAMQPVHNQMLRRNTRLYAWELPQQLPVPRLRSDR 330 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL-SRGRACFRSALKRCAG 191 + DF R +LFG+F +R AA L+ +A+E LC L LE RG CF + RCAG Sbjct: 331 DTDFCRHRDLFGVFGSRGAAEARLRALAEEHGLCMATLSLEKTTRRGSPCFARQVHRCAG 390 Query: 192 ACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSL 251 AC G ES EH RL +L + ++ WP+ GAVA +EQH +H++ W +LG ++L Sbjct: 391 ACVGAESPREHRARLAAALGPIALLPWPFDGAVAWREQHGARACWHVVDEWCYLGCADTL 450 Query: 252 EEATTLIRTPAGFDHDGYKILC 273 E+A L PA FD D Y+IL Sbjct: 451 EDAGALAAAPAHFDLDTYQILA 472 >UniRef50_A5WBX3 UvrABC system protein C n=3 Tax=Psychrobacter RepID=UVRC_PSYWF Length = 614 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 106/265 (40%), Gaps = 14/265 (5%) Query: 14 AAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PD 69 A + L+ + LP PGVY G++ + LY+GK+ +++SRV S+ P Sbjct: 7 TAQADDKQARLKHLIKRLPNLPGVYKMLGKNGDI-LYVGKAKSLKSRVNSYFAKTIDHPK 65 Query: 70 EAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL--NEKRVD 127 A++ + I I T E ALLLE LIKE +P +N LR ++ + + ++ Sbjct: 66 TRALVSRIHDIETIITRSETEALLLEQNLIKEHRPPYNVLLRDDKSYLYVFISADQPYPR 125 Query: 128 VVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSA 185 + Y + + FG F + AA + L + + C R R C Sbjct: 126 LAYGRGKAKHQKGKFFGPFPSAHAAKETLVLMQKMFQMRQCTNTFFR---QRKRPCLEYQ 182 Query: 186 LKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALK-EQHPEMTQYHIIQNWL- 243 +KRC C G S EE+A ++ ++ L+ + K E E + + Sbjct: 183 IKRCRAPCVGLVSAEEYAADVQNTIRFLKGDSSDIHTTLIEKMEHSAEALDFEKAAFYRD 242 Query: 244 WLGAVNSLEEATTLIRTPAGFDHDG 268 L + ++ + D Sbjct: 243 QLSMLREVQSRQAVYTVQGEADIIS 267 >UniRef50_Q12W02 UvrABC system protein C n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=UVRC_METBU Length = 604 Score = 245 bits (627), Expect = 9e-64, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 106/244 (43%), Gaps = 13/244 (5%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSR 78 +R ++++P PGVYL SD + +YIGK+ +++ RV + + AM+R+ Sbjct: 1 MRPDISNIPELPGVYLMKDISDNI-IYIGKAKSLKKRVSQYFQSSKNHSSKTRAMVRKIA 59 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS 137 + +I T E+ AL+LEA L+K+ +P +N L+ +++ +++ + ++ Sbjct: 60 DVDYIVTESEVAALILEANLVKKNRPHYNIDLKDDKRYPYVKVTVNTKFPKIFITRRRLM 119 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG + N + Q L I+ ++ RAC + RC C G Sbjct: 120 DGALYFGPYTNVKPVRQTLDMISQIFRI-KRCNRRVDGKGKRACLNYHIDRCYAPCNGSI 178 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + EE+ + ++++ + +KE +M + I Q + + +A Sbjct: 179 TPEEYRNNVMEAVKLFKGETSG-----TIKELQEKMNIHAIAQEYESAAVIRDQIDALKS 233 Query: 258 IRTP 261 + Sbjct: 234 LSRQ 237 >UniRef50_C9KP10 Excinuclease ABC subunit C n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KP10_9FIRM Length = 623 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 56/249 (22%), Positives = 98/249 (39%), Gaps = 17/249 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQ 76 + + L LP PGVY+ + + +Y+GK+V +++RV + +P AM+ Sbjct: 3 DIVAEKLKLLPDSPGVYIMKDANGRI-IYVGKAVVLKNRVRQYFQHNKNHSPKVKAMVSH 61 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD 135 I T E+ AL+LE LIK+ +P +N L+ ++ +++ ++ V+ Sbjct: 62 IADFEIIMTHSEVEALILECNLIKKHRPHYNISLKDDKSYPYVKVTVQEEYPRVFLTHRV 121 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 FG + + A Q+L+ + L E R C +KRC C G Sbjct: 122 TKDGARYFGPYTDVTAVHQSLKLLRKLFPLRTCRHLQE-----RPCLEYHIKRCLAPCVG 176 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 K + E++A +R L L A +E M Q ++ + A Sbjct: 177 KVTEEDYAAMIRAVLLFLEGRT-----ADVERELKVRMEQAAEAFHFETAARLRDQLRAV 231 Query: 256 TLIRTPAGF 264 I Sbjct: 232 QKIAEKQNI 240 >UniRef50_A9KSS0 UvrABC system protein C n=59 Tax=Firmicutes RepID=UVRC_CLOPH Length = 628 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 102/255 (40%), Gaps = 16/255 (6%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQS 77 L L LP +PGVY+ H D + +Y+GK++++++RV + ++ M+ Sbjct: 3 DLDEELKKLPAKPGVYIMHNNKDEI-IYVGKAISLKNRVRQYFQSSRNLSTKIQQMVSNI 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDF 136 +I E+ AL+LE LIKE +P +N L+ ++ +++ + V Sbjct: 62 DHFEYIIVDSEMEALVLECNLIKEHRPKYNTMLKDDKSYPYIKVTVNEAYPRVLFARQQK 121 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 FG + + A L + + C L + + R C +K+C C Sbjct: 122 KDKAKYFGPYTSLGAVKDILDLLRRLYFIRTCNRNLPKD-IGLERPCLYYHIKQCKAPCQ 180 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMT-QYHIIQNWLWLGAVNSLEE 253 G S EE+ + + +E L A+ K+ +M ++ G + + Sbjct: 181 GYISEEEYRKSIDEVIEFLNGNY-----ALVTKDLQAKMKAASENLEFEEAAGYRDLILS 235 Query: 254 ATTLIRTPAGFDHDG 268 L + D DG Sbjct: 236 VEKLSQKQKASDVDG 250 >UniRef50_B0K791 UvrABC system protein C n=11 Tax=Thermoanaerobacterales RepID=UVRC_THEP3 Length = 615 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 111/278 (39%), Gaps = 24/278 (8%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQ 76 + L LP +PGVY+ +S + +Y+GK+V +++RV + + P ML Sbjct: 1 MTIEEKLKLLPEKPGVYIMKDKSGKI-IYVGKAVVLKNRVRQYFQNKEKQLPKVKVMLSH 59 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN--EKRVDVVYAKEV 134 +I T E+ AL+LE LIK+ +P +N L+ ++ +++ E+ +++ + + Sbjct: 60 VEDFEYIVTDTELEALMLECNLIKKYKPKYNVLLKDDKNYPYIKVTVNEEYPRIMFTRRI 119 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEP-LSRGRACFRSALKRCAGAC 193 + FG +++ A + ++ + + +E + + R C + C+ C Sbjct: 120 EP-DGAKYFGPYSSAFAVRETIKLVRKMFPIRTCNKNIEKDMGKVRECLYYHIGLCSAPC 178 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 K + E++ + Q++ L + + + ++ EE Sbjct: 179 TNKINKEDYIKLVDQAVLFL--------------DGKRDWLIQKLKEDMKKAAEELRFEE 224 Query: 254 ATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPAND 291 A + + K + +I + + D Sbjct: 225 AARIRDQIFAIERTSEKQKVVSVGEDEQDIISMARSAD 262 >UniRef50_C4K928 DNA polymerase III, epsilon subunit n=1 Tax=Thauera sp. MZ1T RepID=C4K928_THASP Length = 502 Score = 244 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 122/308 (39%), Positives = 156/308 (50%), Gaps = 55/308 (17%) Query: 20 YPEHLR-SFLNDLPTRPGVYLFHGESDT-------------------------------- 46 P HL + DLP PGVYLF+GE Sbjct: 191 LPPHLDPEQIADLPDTPGVYLFYGERGGESSQLGGNDEADAEAEADPLGPGRARTGARDR 250 Query: 47 --------MPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISWICTAGEIGALLL 94 +PLYIGKS +RSRVLSH + E ++ +Q RRI WI TAGEIGALL Sbjct: 251 KRHAPLQDLPLYIGKSTRLRSRVLSHFAADHSSDRELSLSQQVRRIEWIATAGEIGALLK 310 Query: 95 EARLIKEQQPLFNKRLRRNRQLCALQLNEK-----RVDVVYAKEVDFSRAPNLFGLFANR 149 EA L+K QP N++LRRNR+LC +L R+++V+A ++DF R +L+G F R Sbjct: 311 EAELVKRLQPTHNRQLRRNRELCTWRLATDIVGDWRLELVHAADLDFGRRDDLYGFFRTR 370 Query: 150 RAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQS 209 R A L+ +A + LC LLGLE +G CF LKRC GAC G ES + HALRL ++ Sbjct: 371 REATNRLRALARDHALCPPLLGLEKPPQGARCFDFQLKRCRGACHGGESPQAHALRLIEA 430 Query: 210 LERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTP-AGFDHDG 268 L L+V W W G V L+E H++ W WLG L+ FDHD Sbjct: 431 LHALKVEHWTWPGPVGLREG----EAIHVVDGWRWLGTATDEAMLADLLEAGRPAFDHDI 486 Query: 269 YKILCKPL 276 YKIL K + Sbjct: 487 YKILVKAV 494 >UniRef50_Q47EE8 UvrABC system protein C n=6 Tax=Proteobacteria RepID=UVRC_DECAR Length = 603 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 6/193 (3%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRI 80 ++FL L PGVY + LY+GK+ N++ RV S+ R +P A M+ Q I Sbjct: 6 KAFLATLTELPGVYRMLDIGGNV-LYVGKAKNLKKRVASYFRENLSSPRIAHMVSQIASI 64 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 T E ALLLE LIK P +N R ++ + L++ + + + R Sbjct: 65 ETTATRTEAEALLLENNLIKSLAPRYNILFRDDKSYPYIVLSKGKFPRLGFFRGNPDRKA 124 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 + FG + + A ++ + +L +R R C +KRC+G C G S + Sbjct: 125 DYFGPYPSSWAVRDSIHLMQKMFRLRTCE-DTVFSNRSRPCLLYQIKRCSGPCVGFISAD 183 Query: 201 EHALRLRQSLERL 213 ++A ++ + L Sbjct: 184 DYAADIQLAAMFL 196 >UniRef50_B8CYK1 Excinuclease ABC, C subunit n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYK1_HALOH Length = 607 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 96/245 (39%), Gaps = 12/245 (4%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLRQSR 78 ++ L LP RPGVYL E+ + +Y+GK+ ++R RV S+ R M++ Sbjct: 3 YIEEQLKRLPDRPGVYLMKDETGEV-IYVGKAKSLRRRVRSYFRKGNHTFKTKIMVKHIA 61 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS 137 +I T E+ A +LEA LIK+ P FN RL+ ++ +++ ++ ++ + + Sbjct: 62 DFDYIVTDTEVEAFILEANLIKKYNPKFNIRLKDDKTYPYIKVTVQEDFPRIFKTRLVKN 121 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS-RGRACFRSALKRCAGACCGK 196 FG F + A + + + D L LE R C + +C G C G Sbjct: 122 DGNRYFGPFTDVNAIYKTIDVLKDLFSLRTCKKNLEAGKPEKRPCLNYHIGKCVGPCIGA 181 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 + + + L + E EM Q +N+ A Sbjct: 182 IDRNSYRELVDRVCLFLSGKQ-----DELINEVEKEMYQAAEKKNFEKAARFRDAVRALK 236 Query: 257 LIRTP 261 I Sbjct: 237 NISAQ 241 >UniRef50_B3QRR8 Excinuclease ABC, C subunit n=3 Tax=Bacteria RepID=B3QRR8_CHLT3 Length = 640 Score = 242 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 15/256 (5%) Query: 10 LEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR--- 66 E + + E L+ L +LPT PGVY F + D +Y+GK+ N+R+RV S+ R Sbjct: 16 NENGETSEKKLSEALQFKLKNLPTSPGVYQFKDK-DERVIYVGKAKNLRARVQSYFRNLS 74 Query: 67 --TPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK 124 + ++R+ + I T E+ AL+LE LIK+ +P +N L+ ++ + + + Sbjct: 75 EHSGKTRLLVRRIMDLELILTGTEVEALILENNLIKQLKPRYNINLKDDKSYPYIVVTNE 134 Query: 125 RVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL----SRGRA 180 V+ +G + R L I++ ++ L + + + Sbjct: 135 PFPRVFPTRNVRRDGSKYYGPYTETRQMRMLLDAISEIFQVRSCSLNMTDENIAARKFKV 194 Query: 181 CFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQ 240 C +K+C G C +S E++ + + + LR ++ M Y Sbjct: 195 CLDYHIKKCLGPCEALQSREDYDAMIDEVKKLLRGKT-----KDIVRSLESRMKNYAKEL 249 Query: 241 NWLWLGAVNSLEEATT 256 + + + EA Sbjct: 250 KFEYAAEIKRQLEALE 265 >UniRef50_C6MYN0 Excinuclease ABC subunit n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MYN0_9GAMM Length = 620 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 58/247 (23%), Positives = 102/247 (41%), Gaps = 13/247 (5%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLRQSR 78 L FL LP PG+Y + T+ LY+GK+ N++ RV S+ +++ Q Sbjct: 9 ELTQFLAKLPNEPGIYRMLDQEGTV-LYVGKAANLKKRVTSYFNKQNTGVKTRSLVSQIA 67 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE--KRVDVVYAKEVDF 136 I T E ALLLE+ LIK +P +N LR ++ + L+E + + Sbjct: 68 SIEISVTRSETEALLLESNLIKALRPKYNVLLRDDKSYPYIHLSEHPDFPRIESYRSKKK 127 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 A N FG + + A + + TI K+ +R R C + +KRC C Sbjct: 128 PLAGNFFGPYPSVTAVKETIVTIQKVFKI-RNCRDSYFNARSRPCLQYQIKRCTAPCVHY 186 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 + +E+ ++ ++ L+ + L E M + + N+ + + Sbjct: 187 ITSDEYQRSVQDAMRFLQGK-----SQLILDELAKRMEEAVLNLNFEEAAMLRDQIKNLR 241 Query: 257 LIRTPAG 263 L++ G Sbjct: 242 LVQEQQG 248 >UniRef50_Q5F928 UvrABC system protein C n=29 Tax=Betaproteobacteria RepID=UVRC_NEIG1 Length = 617 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 85/205 (41%), Gaps = 10/205 (4%) Query: 18 YEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAM 73 + FL +LP PGVY F E + LY+GK+VN++ RV + +P A M Sbjct: 7 SPEQFDIPLFLKNLPKLPGVYRFFDEGGNV-LYVGKAVNLKRRVSGYFQKNDHSPRIALM 65 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKE 133 ++Q R I T E AL+LE IK P +N R ++ L L+ + + Sbjct: 66 VKQVRHIETTITRSEAEALILENNFIKALSPKYNILFRDDKSYPYLMLSGHQYPQMAYYR 125 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAG 191 FG + N A ++Q + + C + R R C +KRC Sbjct: 126 GTLKNPNQYFGPYPNSNAVRDSIQVLQKVFMLRTCEDSVF---EHRDRPCLLYQIKRCTA 182 Query: 192 ACCGKESHEEHALRLRQSLERLRVV 216 C G S E++ +RQ+ L Sbjct: 183 PCVGHISEEDYCDSVRQAATFLNGK 207 >UniRef50_C0ZZE8 UvrABC system protein C n=14 Tax=Actinomycetales RepID=UVRC_RHOE4 Length = 730 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 91/246 (36%), Gaps = 14/246 (5%) Query: 19 EYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAM 73 P R +P PGVY F + +Y+GK+ ++RSR+ S+ P M Sbjct: 2 PDPSTYRPATGTIPAAPGVYKFRDPHGRV-IYVGKAKSLRSRLNSYFADVTTLHPRTRQM 60 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAK 132 + + + W + E+ AL LE IKE P FN R R ++ L + + ++ Sbjct: 61 VTTAGSVEWTVVSTEVEALQLEYNWIKEFDPRFNVRYRDDKTYPVLAVTLNEEFPRLFVY 120 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCA 190 + FG +++ A + L + + C + GR C + +C+ Sbjct: 121 RGPRRKGVRYFGPYSHAWAIRETLDLLLRVFPARTCSSGVFKRHNQIGRPCLLGYIDKCS 180 Query: 191 GACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS 250 C G+ S EEH + + L +K+ M Q ++ + Sbjct: 181 APCVGRVSAEEHRQIVEDFCDFLAGRT-----DKLVKDLEKRMQQASEDLDFETAARLRD 235 Query: 251 LEEATT 256 A Sbjct: 236 DIGALR 241 >UniRef50_D1VGT9 Excinuclease ABC, C subunit n=1 Tax=Frankia sp. EuI1c RepID=D1VGT9_9ACTO Length = 835 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 93/244 (38%), Gaps = 14/244 (5%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLR 75 P R +P PGVY F + LY+GK+ N+R+R+ ++ P M+ Sbjct: 4 PASYRPAPGSIPETPGVYRFRDPHGRV-LYVGKAKNLRARLNNYFTDVFALHPRTRTMVT 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + + W + E+ AL LE IKE P FN R R ++ +L + ++ + Sbjct: 63 TASSVEWTVVSTEVEALALEYTWIKEYDPRFNVRYRDDKSYPSLAVTLQEEFPRLQVMRG 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGA 192 + FG +A+ A + L + + C + GR C + RC+ Sbjct: 123 PKRKGVRYFGPYAHAWAIRETLDLLLRVFPARTCSTGVFKRAGQVGRPCLLGYIDRCSAP 182 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C G+ + +EH + + + + L+ EM Q++ + Sbjct: 183 CVGRVTPDEHRQIVDDFCDFMAGQTGRF-----LRRLEDEMRAAADAQDYERAARLRDDA 237 Query: 253 EATT 256 A Sbjct: 238 GALR 241 >UniRef50_Q24WC0 UvrABC system protein C n=16 Tax=Firmicutes RepID=UVRC_DESHY Length = 607 Score = 240 bits (612), Expect = 6e-62, Method: Composition-based stats. Identities = 56/235 (23%), Positives = 94/235 (40%), Gaps = 14/235 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQSR 78 E LR L+ LP +PGVYL S + +Y+GK+ +++RV S+ M+ Sbjct: 18 EILREKLSLLPDKPGVYLMKDASGQI-IYVGKAKVLKNRVRSYFTGSHNGKTQLMISLIA 76 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 I T E+ ALLLE LIK+ P +N LR ++ + + ++ + Sbjct: 77 DFETIITDSEVEALLLECNLIKKHNPKYNILLRDDKTYPFITITDEAHPRILVTRQVKKG 136 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 A +G + N AA +A + + + P + C L +C G C Sbjct: 137 AGKYYGPYPNATAAKEAARLLNRLFP--FRKCRQIP---NKPCLYYHLGQCLGPCQVDVP 191 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 E + +++ L+ QGA+ LK +M + + L E Sbjct: 192 KEAYDKIRKEAAAFLKGD----QGAI-LKALEKKMKEASENLEFERAKEYRDLME 241 >UniRef50_Q180Q8 UvrABC system protein C n=8 Tax=Clostridiales RepID=UVRC_CLOD6 Length = 605 Score = 239 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 102/254 (40%), Gaps = 14/254 (5%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE-----AAMLRQS 77 ++ L LP+ PGVYL + D + +Y+GK++++++RV + ++ +M++ Sbjct: 3 DIQEHLKKLPSEPGVYLMKDKYDHI-IYVGKAISLKNRVRQYFQSSKNHTSKVKSMVKNI 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEVDF 136 + +I T E+ AL+LE LIK +P +N LR ++ +++ + + Sbjct: 62 YKFEYIITDSELEALILECNLIKRYRPKYNVVLRDDKTYPYIKVTTNEDYPRILKVRRVL 121 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 FG + N A L+ I+ + C + ++ R C + +C G C Sbjct: 122 KDKAKYFGPYTNITAVNDTLELISSTYPIRSCKIDIDKAIKNKTRPCLNLHINKCLGPCT 181 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 G S EE+ + + + L ++ +M + + + ++ Sbjct: 182 GNVSKEEYGKMIEEIIMCLSGKEEKL-----MELLKEKMNESSMNFRFEEAAVYRDKIKS 236 Query: 255 TTLIRTPAGFDHDG 268 + D Sbjct: 237 LEEMIQKQKIDATV 250 >UniRef50_Q820N6 UvrABC system protein C n=2 Tax=Proteobacteria RepID=UVRC_NITEU Length = 604 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 96/245 (39%), Gaps = 11/245 (4%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRI 80 ++F+ LP +PGVY + + +Y+GK++++R RV S+ + +P M+ Q I Sbjct: 9 KAFVLTLPAQPGVYRMLNAAGDV-IYVGKAIDLRKRVSSYFQKSGLSPRIQLMVSQIAGI 67 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 T E ALLLE LIK P +N R ++ L L + Sbjct: 68 ETTVTRSEAEALLLENNLIKSLAPRYNILFRDDKSYPYLLLTRHIFPRLAFYRGALDDRH 127 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG F N ++Q + +L + R R C +KRC+G C G + E Sbjct: 128 QYFGPFPNAGVVKSSIQLLQKVFRLRTCENSVFD-HRTRPCLLYQIKRCSGPCVGLITPE 186 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 + ++ + L+ LK +M Q++ + +A I+ Sbjct: 187 AYQQDVKSAAMFLQGKQ-----DEVLKTIEQKMFTASDQQDYEQAAQLRDQMQALRKIQE 241 Query: 261 PAGFD 265 D Sbjct: 242 KQFVD 246 >UniRef50_B0VLX1 UvrABC system protein C n=17 Tax=Moraxellaceae RepID=UVRC_ACIBS Length = 599 Score = 238 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 101/251 (40%), Gaps = 14/251 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQS 77 H+ L +L PGVY G+ + LY+GK+ N+++RV S+ P A++ + Sbjct: 7 PHIEKILANLTQLPGVYKMLGKEGEL-LYVGKAKNLKNRVSSYFVKTIEHPKTQALVARI 65 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL--NEKRVDVVYAKEVD 135 I + T E ALLLE LIK+ +P +N LR ++ + + ++ + + Sbjct: 66 YDIETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSADKPYPRIASGRGKG 125 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 + FG + + +A L + + R R C + +KRC+ C G Sbjct: 126 KHQIGKFFGPYPSAYSARDTLLVLQKLFNV-RQCENSYFSQRKRPCLQYQIKRCSAPCVG 184 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHI-IQNWLWLGAVNSLEEA 254 S E++ + S+ L+ +E +M Q ++ + + L Sbjct: 185 LVSPEDYKEDVNNSIRFLQG-----DTKELNQELIAKMEQAAADLEFEKAVFYRDRLSLL 239 Query: 255 TTLIRTPAGFD 265 + A F Sbjct: 240 REVQAQQAVFK 250 >UniRef50_C2CW30 Excinuclease ABC subunit C n=1 Tax=Gardnerella vaginalis ATCC 14019 RepID=C2CW30_GARVA Length = 749 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 103/238 (43%), Gaps = 13/238 (5%) Query: 6 TSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL 65 S + F A+ + + + R +D+P +PGVY + E + +Y+GK+ ++R+R+ ++ Sbjct: 45 NSVKNNFGASLLGDTRDLFRPKTSDIPNQPGVYKWRDEKGKV-IYVGKAKSLRNRLSNYF 103 Query: 66 RT-----PDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ 120 + P +M+ +R + W E+ AL LE IKE P FN + ++ L Sbjct: 104 QPLNQLHPRTQSMVLTARSLEWTVVNTELEALTLEYTWIKEFNPRFNVVFKDDKTYPYLA 163 Query: 121 LN-EKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSR 177 ++ V+ S++ FG +A +L ++ + C + ++ Sbjct: 164 VSVNDDFPRVWITRNRNSKSTRYFGPYAKVWQLRHSLDSLLKTFPVRTCRQSVFVKAHKT 223 Query: 178 GRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQ 235 GR C +A+ +C+ C K + H + Q + L G + + EM + Sbjct: 224 GRPCLLAAIGKCSAPCIAKVDRKTHRHNVEQLVGVLTGSI----GDSYINDLTREMKE 277 >UniRef50_D1RJY2 Excinuclease ABC subunit C n=1 Tax=Legionella longbeachae D-4968 RepID=D1RJY2_LEGLO Length = 631 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 104/264 (39%), Gaps = 18/264 (6%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE----AAMLRQSR 78 L FL LP PG+Y ES + LY+GK+ N++ RV S+ +++ Q Sbjct: 17 ELALFLAKLPNEPGIYRMLDESGAV-LYVGKAANLKKRVTSYFNKQKTGIKTRSLVTQIA 75 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK--RVDVVYAKEVDF 136 I T E ALLLE+ LIK +P +N LR ++ + L+ + + Sbjct: 76 SIEISVTRSETEALLLESNLIKTLKPKYNVLLRDDKSYPYIHLSNHPQFPRIESYRSKKK 135 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 + + FG + + + + TI K+ +R R C + +KRC C Sbjct: 136 PVSGDFFGPYPSSGTVKETIVTIQKVFKI-RNCRDSYFNARSRPCLQYQIKRCTAPCVNY 194 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 S E++ ++ ++ L+ C + L E M + N+ + + Sbjct: 195 ISPEDYKRSVQDAMRFLQGKC-----QLILDELAKRMDKAVSELNFEEAALLRDQIKCLR 249 Query: 257 LIRTPAGF-----DHDGYKILCKP 275 L++ G D D I P Sbjct: 250 LVQEQQGILQLQGDADAIAIEVNP 273 >UniRef50_B2A711 Excinuclease ABC, C subunit n=2 Tax=Firmicutes RepID=B2A711_NATTJ Length = 685 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 56/270 (20%), Positives = 103/270 (38%), Gaps = 19/270 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQS 77 E L+ L +LP +PGVYL + + +Y+GK++N+++RV S+ + ++A M + Sbjct: 4 EDLQEKLANLPEKPGVYLMKSKQGRV-IYVGKAINLKNRVRSYFNSGNKAVKVQVMTPKI 62 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 I I T E+ AL+LE LIK+ +P +N LR ++ L++ + Sbjct: 63 SDIETIVTDSELEALILENNLIKKYRPKYNVSLRDDKNYPYLKITTEEDYPRLIIARRMG 122 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 + FG + N A + ++ + + R C + RC C K Sbjct: 123 KHGRYFGPYPNAGAVRETIKLLRKLFPVRTCKGETPKNQGKRPCLNYFINRCLAPCNEKV 182 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 S +E+ ++ + + E E + + E+A Sbjct: 183 SRDEYREMIQDIIS--------------VLEGKEEELLNELERKMNLAAEEMEFEKAAEY 228 Query: 258 IRTPAGFDHDGYKILCKPLLSGNYEITELD 287 A + K +Y+I L Sbjct: 229 RNQKAALEKIRQKQKIVSERREDYDIIALG 258 >UniRef50_A7VUD6 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VUD6_9CLOT Length = 628 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 103/245 (42%), Gaps = 14/245 (5%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSR 78 LR+ LP PGVYL S+ + +YIGK+ +++RV + P M+ Q Sbjct: 8 LRTRAMALPAAPGVYLMKNASNEI-IYIGKAKALKNRVSQYFGSPKNHPPKVRKMVSQVD 66 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 +I T E AL+LE LIK+ P +N L+ ++ +++ K ++ + + Sbjct: 67 HFDYILTDSEFEALVLECSLIKQHTPKYNILLKDDKGYHYIKVTPKPYRRIFEAKQKLND 126 Query: 139 APNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 G + + + Q++ KL C E + RGR C +K+C C GK Sbjct: 127 GAEYIGPYTSSFSVKQSVDEARKIFKLPTCSRKFPQE-IGRGRPCLNYFIKQCCAPCRGK 185 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 S EE+ + ++LE L+ V++K+ +M + + + A Sbjct: 186 LSEEEYEGYVDEALEFLKG-----GSVVSVKDMTQQMNEAAENLEFERAARIRDRISAVK 240 Query: 257 LIRTP 261 I Sbjct: 241 RITAK 245 >UniRef50_A4FBL9 UvrABC system protein C n=26 Tax=Actinomycetales RepID=UVRC_SACEN Length = 717 Score = 237 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 90/244 (36%), Gaps = 14/244 (5%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLR 75 P R +P PGVY FH + +Y+GK+ ++RSR+ S+ P M+ Sbjct: 4 PSTYRPAPGTIPDAPGVYRFHDAEGRV-IYVGKAKSLRSRLSSYFADLSGLHPRTRQMVT 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + + W E+ AL LE IKE P FN R R ++ L + + +Y Sbjct: 63 TATGVRWTVVGTEVEALQLEYSWIKEYDPRFNVRYRDDKSYPVLAVTLHEDFPRLYVTRG 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGA 192 + FG +A+ A + L + + C + GR C + +C+ Sbjct: 123 PRRKGVRYFGPYAHAWAIRETLDMLLRVFPARTCSAGVFKRHSQIGRPCLLGYIGKCSAP 182 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C G+ +EH + + +++ EM Q + + Sbjct: 183 CVGRVDADEHRRIVEDFCDFFAGRTDTL-----IRKLDREMRQASEELEFERAARLRDDL 237 Query: 253 EATT 256 EA Sbjct: 238 EALR 241 >UniRef50_Q5X1P5 UvrABC system protein C n=7 Tax=Gammaproteobacteria RepID=UVRC_LEGPA Length = 618 Score = 237 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 66/267 (24%), Positives = 105/267 (39%), Gaps = 18/267 (6%) Query: 20 YPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLR 75 L FL LP+ PG+Y E T+ LY+GK+ N++ RV S+ A++ Sbjct: 6 LSAELALFLTKLPSEPGIYRMLDEEGTV-LYVGKAANLKKRVNSYFSKQNTGVKTRALVS 64 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE--KRVDVVYAKE 133 Q + I T E ALLLE+ LIK +P +N LR ++ + L+ + + Sbjct: 65 QIKSIEISVTRSETEALLLESNLIKALRPKYNVLLRDDKSYPYIHLSNHPDFPRIELYRS 124 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 + N FG + A + + TI K+ +R R C + +KRC C Sbjct: 125 KKKPPSGNFFGPYPGVAAVRETIVTIQKIFKI-RNCRDSYFKARSRPCLQYQIKRCTAPC 183 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 S E + L + ++ L+ C + L M Q N+ + + Sbjct: 184 VHYISPENYKLSVEDAIRFLQGKC-----QIILDALAERMKQAVNQLNFEEAAVLRDQIK 238 Query: 254 ATTLIRTPAGF-----DHDGYKILCKP 275 LI+ G D D I +P Sbjct: 239 NLRLIQEQQGVVQLRGDADVIAIEVRP 265 >UniRef50_C9LR57 Excinuclease ABC subunit C n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR57_9FIRM Length = 625 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 112/253 (44%), Gaps = 18/253 (7%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSR 78 +R+ ++ LP PGVY + + + +Y+GK+VN+++RV S+LR +P AAM+R + Sbjct: 8 IRAKVDALPDSPGVYRWKDKDGRV-IYVGKAVNLKNRVRSYLREDKNRSPKVAAMIRHAA 66 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN--EKRVDVVYAKEVDF 136 + TA E+ AL+LE LIKE P +N LR ++ +++ EK ++ + + Sbjct: 67 DLDITMTATEMEALILECNLIKELHPKYNISLRDDKSYPYVKITVNEKWPRILVTRNIRR 126 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 FG F + + + L I + + R C + + C C Sbjct: 127 DDGAKYFGPFTDVGSLRKTLSLIRRLYPI----RTCRSMKVSRPCLQYHMNLCCAPCWNH 182 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKE----QHPEMTQYHIIQNWLWLGAVNSLE 252 + E++ + ++ + A+ + + ++++ L AV S++ Sbjct: 183 CTEEQYHEYVVKTCDLFEGKNTELVKALQKDMESASEEMNFERAAVLRDQLH--AVQSVQ 240 Query: 253 EATTLIRTPAGFD 265 + ++ FD Sbjct: 241 QRQNIVSKEGDFD 253 >UniRef50_D2RIL8 Excinuclease ABC, C subunit n=3 Tax=Veillonellaceae RepID=D2RIL8_ACIFE Length = 618 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 59/252 (23%), Positives = 102/252 (40%), Gaps = 13/252 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQ 76 + ++ L LP PGVY+ H S + +Y+GK+V +++RV S+ R +P A+ Sbjct: 3 DAIKETLAVLPNAPGVYIMHDASGKV-IYVGKAVILKNRVRSYFRPASQVSPKVRAINAH 61 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD 135 I I TA E+ AL+LE LIK+ +P +N L+ ++ L++ + + Sbjct: 62 VASIETIVTASEMEALILECNLIKKYRPRYNIDLKDDKTYPYLKITVGEAYPRMVLTRRV 121 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 +G FA+ A ++ I L + L+ R C + L RC C G Sbjct: 122 LKDGARYYGPFADAGALRDTMKLIRTMFPLRH----CRNLNAKRPCLQYHLHRCLAPCTG 177 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQH-PEMTQYHIIQNWL-WLGAVNSLEE 253 K E+ + L L + + K Q + ++ + L ++ L E Sbjct: 178 KVPVSEYRQMVDAVLLLLDGKVTQLEKDLTAKMQQASDNLEFEAAARYRDSLLSLRKLAE 237 Query: 254 ATTLIRTPAGFD 265 D Sbjct: 238 KQKATTESGDRD 249 >UniRef50_Q0F271 Excinuclease ABC subunit C n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F271_9PROT Length = 611 Score = 236 bits (603), Expect = 7e-61, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 11/240 (4%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISWI 83 L LP PGVY + + +Y+GK+ N+R RV S+ + +P AM+RQ R I++ Sbjct: 9 LTALPREPGVYRMLDHARKV-IYVGKARNLRKRVSSYFQRQPESPRTIAMVRQVRDIAFS 67 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLF 143 T E AL+LE LIK+ +P +N ++ ++ + L+++ + + + F Sbjct: 68 VTPSEAEALVLEHNLIKQLKPRYNVLMKDSKTYPYILLSDEPFPKLTMYRGNRTLPGEYF 127 Query: 144 GLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHA 203 G F N A Q L + L +R R C + + RC+ CC S ++ Sbjct: 128 GPFPNAGAVHQTLHIMQSMF-LLRDCEDAVFNNRSRPCMQHQIGRCSAPCCDIVSKAQYR 186 Query: 204 LRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPAG 263 ++ + + LR LK +M Q + + A + + Sbjct: 187 RQVDEVRQFLRGRDNDL-----LKGWEQQMQQAADAMQFEQAAILRDRIRALRSVLAGSE 241 >UniRef50_UPI00016BFB47 excinuclease ABC, C subunit n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFB47 Length = 602 Score = 235 bits (601), Expect = 9e-61, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 99/243 (40%), Gaps = 13/243 (5%) Query: 30 DLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSRRISWIC 84 +LPT PGVYL + D + +Y+GK+ N+++RV + + M+ +I Sbjct: 3 NLPTTPGVYLMKDDLDEV-IYVGKAKNLKNRVSQYFQKNKNHSAKTIKMVSNIASYEYIV 61 Query: 85 TAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAPNLF 143 T E+ AL+LE LIK+ P +N RL+ +++ +++N + + F Sbjct: 62 TNTEVEALILECNLIKKYSPKYNIRLKDDKRYPYIKINIKSPFPRIQVVRKIIKDDAKYF 121 Query: 144 GLFANRRAALQALQTIADEQKLCYGLLGL-EPLSRGRACFRSALKRCAGACCGKESHEEH 202 G + + + + ++ I +L L + + + R C + RC+G C + E+ Sbjct: 122 GPYTDATSMWEMIELIKQLWQLRSXNKKLPKDIGKNRECLNFHIGRCSGPCIKNITAREY 181 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPA 262 + + +E L + E M++ N+ + A + Sbjct: 182 HKIVDEIVEFLSGDY-----RKXVTELKQRMSEASDAMNFELAATLRDQLIAIAKLEQKQ 236 Query: 263 GFD 265 D Sbjct: 237 TVD 239 >UniRef50_A5FM03 UvrABC system protein C n=25 Tax=Bacteroidetes RepID=UVRC_FLAJ1 Length = 597 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 97/240 (40%), Gaps = 20/240 (8%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQS 77 L + LP PGVY ++ + + LY+GK+ N++ RV S+ T ++++ Sbjct: 4 PSLDLQILTLPDNPGVYQYYDKDGKI-LYVGKAKNLKKRVSSYFNKIHDTAKTNVLVKKI 62 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 I I E ALLLE LIK QP +N LR ++ + + ++ ++ Sbjct: 63 VTIKHIVVPTETDALLLENNLIKTLQPRYNVLLRDDKSYPWICIKKEPFSRIFLTRRMVK 122 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS----RGRACFRSALKRCAGAC 193 FG + N + L I + L L + + + C + C G C Sbjct: 123 DGSEYFGPYTNFKMVYTILDLIKELYPLRTCNYDLSQSNIDSGKFKVCLEYHIGNCKGPC 182 Query: 194 CGKESHEEHALRL-----------RQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNW 242 G E EE+ ++ ++SL+ + + + + +E + +++N+ Sbjct: 183 EGLEPLEEYQRQVNAIREILKGNFKESLKDFKKLMNNYAQNLQFEEAQKIKEKIEVLENY 242 >UniRef50_Q2JCI3 UvrABC system protein C n=12 Tax=Actinomycetales RepID=UVRC_FRASC Length = 705 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 91/244 (37%), Gaps = 14/244 (5%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLR 75 P R +P PGVY F E + LY+GK+ N+R+R+ ++ P M+ Sbjct: 4 PASYRPAPGSIPETPGVYRFRDEHGRV-LYVGKAKNLRARLANYFAELHTLHPRTQHMVS 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + + W + E+ AL LE IK+ P FN R R ++ +L + + + Sbjct: 63 SASSVDWTVVSTEVEALQLEYTWIKQFDPRFNVRYRDDKSYPSLAVTLHEEFPRLQVMRG 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGA 192 + FG +A+ A + L + + C G + GR C + RC+ Sbjct: 123 PKRKGVRYFGPYAHAWAIRETLDLLLRVFPARTCSGGVFKRAAQVGRPCLLGYIDRCSAP 182 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C G+ H + + + + L+ EM Q Q + + Sbjct: 183 CVGRVDAATHREIVEDFCDFMSGQTGRY-----LRRLEREMQQAAQAQEYERAARLRDDI 237 Query: 253 EATT 256 A Sbjct: 238 GALR 241 >UniRef50_Q3ZYA3 UvrABC system protein C n=5 Tax=Dehalococcoides RepID=UVRC_DEHSC Length = 607 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 8/201 (3%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQ 76 E L++ + LP PGVYL + +Y+GK+ ++ RV S+ TP ++ Q Sbjct: 4 ETLQNQIASLPENPGVYLMKNAQGEI-IYVGKAAVLKDRVKSYFVPPSRLTPKTCQLVSQ 62 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD 135 + ++ T E AL+LE LIK +P FN RL+ ++ L++ ++ +Y Sbjct: 63 INELEYLITGSEQEALILELNLIKRHRPYFNVRLKDDKGFPYLKITLNEKWPRIYITRSM 122 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 FG FAN R+ LQ + + + EP R C + +C C G Sbjct: 123 ADDGGRYFGPFANTRSVRHTLQVLKELFRFRSCNRT-EPEKHSRPCLEYDIHQCLSPCTG 181 Query: 196 KESHEEHALRLRQSLERLRVV 216 K S ++ + Q++ L Sbjct: 182 KISKSDYDHLISQAILFLEGK 202 >UniRef50_Q2LR71 UvrABC system protein C n=1 Tax=Syntrophus aciditrophicus SB RepID=UVRC_SYNAS Length = 618 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 97/244 (39%), Gaps = 14/244 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAM----LRQS 77 + L ++ P PGVYL + + LY+GK+ N++SR ++ D AM + + Sbjct: 4 QQLEGRIDIAPRTPGVYLMKDAAGKI-LYVGKAKNLKSRTRAYFSGTDSRAMIPFLVSRI 62 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDF 136 I +I T E AL+LE LIKE P +N R ++ ++ + + Sbjct: 63 HDIEFILTETEKEALILENNLIKEHHPRYNICFRDDKAYFNIRADLNEPFPRFQLVRRPR 122 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 FG + + +A + LQ + L E SR R C +KRC C G+ Sbjct: 123 KDGAKYFGPYPSSASARETLQFLQSIFPLRT-CRDAELKSRTRPCLEYQIKRCLAPCVGR 181 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 + E++ +R + L +G L+E M + + A + Sbjct: 182 INSEDYLQMVRDGVSFLEG-----RGNNLLRELRERMKMAA--EQMNYEEAAFLRDRIRA 234 Query: 257 LIRT 260 + T Sbjct: 235 IEET 238 >UniRef50_C1PCU9 Excinuclease ABC C subunit domain protein n=1 Tax=Bacillus coagulans 36D1 RepID=C1PCU9_BACCO Length = 361 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 14/217 (6%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQSRRI 80 + L+ LP PG YL + +Y+GK+ +++RV S+ ++ + + Sbjct: 5 ILHKLSLLPEEPGCYLMKSREGEI-IYVGKAKKLKNRVRSYFTGSHDEKTTQLVGEIFDL 63 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 WI TA AL+LE LIK+ +P +N L+ ++ +++ ++R + Sbjct: 64 EWIVTATNTEALVLEMNLIKQYRPKYNIMLKDDKSYPFIKITDERHPQLILTREAGRDKG 123 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG F N RAA + + + L P S R C L C G C + E Sbjct: 124 KYFGPFPNARAAAETKKVLDRLYPLRRC-----PESSTRPCLYYQLGLCIGTCAREVGEE 178 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYH 237 E+ ++R+ + LK+ EM Q Sbjct: 179 EYKEQIRKIVHFFHGGY-----RAVLKDMKKEMLQAA 210 >UniRef50_Q03F33 UvrABC system protein C n=7 Tax=Firmicutes RepID=UVRC_PEDPA Length = 594 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 99/230 (43%), Gaps = 13/230 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQSR 78 EH+ L LP +PG Y + + +Y+GK+ N+++RV S+ ++ A ++ + Sbjct: 4 EHIEHKLALLPDKPGCYQMKNLNSQI-IYVGKAKNLKNRVRSYFKSSHEGKTAKLVSEIA 62 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 +I T+ + A LLE LI++ QP +N +L++ +++ ++ + Sbjct: 63 DFDYIVTSSDKEAFLLEITLIQKFQPYYNIKLKKGTGYPYIKITNEKDPRMEIVSSVRRD 122 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG + N AA + L + L +GR C + +C GAC + Sbjct: 123 GGFYFGPYPNVYAAEETLHFLEKVYPLRRCNGF-----QGRPCLYYHMGQCLGACFQEVP 177 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQH----PEMTQYHIIQNWLW 244 EE+ ++ + LR + ++ K Q E + I++ + Sbjct: 178 KEEYDQQIAKIKSFLRGNVAKIKQSLQTKMQKASEAMEFERAADIRDQIH 227 >UniRef50_B8I8F2 UvrABC system protein C n=2 Tax=Clostridium RepID=UVRC_CLOCE Length = 613 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 109/257 (42%), Gaps = 15/257 (5%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQS 77 ++ L LP + GVY+ + + +Y+GK+V +++RV + P AM+ + Sbjct: 3 DIQEELKKLPDKSGVYIMKDANG-VVIYVGKAVVLKNRVRQYFQQSANHPPKVQAMVSKV 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ--LNEKRVDVVYAKEVD 135 +I E+ AL+LE LIK+ +P +N L+ ++ ++ LNE+ ++ + V+ Sbjct: 62 SEFEYIVVDSEVEALMLECTLIKKYKPKYNILLKDDKHYPYIKVTLNEEYPRILKTRRVE 121 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 FG +++ A + T+ K C L + + R C +K+C C Sbjct: 122 -KDGARYFGPYSSGFAVNDTIDTLKKLFSLKTCNKNLP-RDIGKTRPCLNYHMKQCLAPC 179 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALK-EQHPEMTQYHIIQNWL-WLGAVNSL 251 G + +E+ +++ L + ++ E E + + ++ L Sbjct: 180 QGGVNRDEYREMMKKICRFLGGQYDEIINDLRIQMETAAEQLDFEKAAQLRNKITSIKQL 239 Query: 252 EEATTLIRTPAGFDHDG 268 E+ ++ T D D Sbjct: 240 SESQKVLFTDLE-DRDI 255 >UniRef50_C2MAD2 Excinuclease ABC subunit C n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MAD2_9PORP Length = 602 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 100/220 (45%), Gaps = 15/220 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAAMLRQS 77 + +++ L +P PG Y + ++ T+ +Y+GK+ N+R+RV S+ P ++ + Sbjct: 4 DEIKAILPTIPQEPGCYQYRNKNGTI-IYVGKAKNLRNRVSSYFNNSPKNPKTTRLVSEI 62 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 R++ + E AL+LE LIK P +N L+ ++ + + ++ ++A + Sbjct: 63 RQLEYFVVNTEAEALVLENNLIKTHLPKYNILLKDDKSYPRIVITDEPFPRIFATRKEVG 122 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEP----LSRGRACFRSALKRCAGAC 193 + + FG + N A + I +L L P R C + +K+C G C Sbjct: 123 KG-DYFGPYPNVAMAHTVIDLIHRVLQLRSCRYALTPEVVRERRVDLCLQYHIKKCGGPC 181 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEM 233 G S EE+ ++ + L+ + ++E+ EM Sbjct: 182 QGFVSAEEYDHSVQLARRILKGEIS-----ILIEEEVEEM 216 >UniRef50_Q2SF17 UvrABC system protein C n=47 Tax=Proteobacteria RepID=UVRC_HAHCH Length = 612 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 96/243 (39%), Gaps = 23/243 (9%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLRQSRRI 80 +SFL L TRPGVY + LY+GK+ N+++RV S+ R A++ + I Sbjct: 10 KSFLKQLTTRPGVYRMMDARGEV-LYVGKARNLKNRVSSYFRNTGVSIKTRALVEKIADI 68 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN--EKRVDVVYAK-EVDFS 137 T E ALLLE LIK +P +N LR ++ + L+ ++ + + + + Sbjct: 69 EITITHSETEALLLEQNLIKTLKPPYNILLRDDKSYPYIYLSSHDEYPSLTFRRVRQKKT 128 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG + + A ++L + ++ +R R C + + RC+ C G Sbjct: 129 GKGRFFGPYTSAAAVRESLALLQKIFRI-RQCEDSFFSNRSRPCLQHQIGRCSAPCVGLI 187 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + +A + + L + + E IQ A E A L Sbjct: 188 DPQSYAEDMSHATMFLEG-----RNPEIINET---------IQQMEVASAQLDFERAAVL 233 Query: 258 IRT 260 Sbjct: 234 RDQ 236 >UniRef50_Q0RH00 DNA excision repair enzyme UvrABC; UvrC subunit n=1 Tax=Frankia alni ACN14a RepID=Q0RH00_FRAAA Length = 802 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 92/244 (37%), Gaps = 14/244 (5%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLR 75 P R +P PGVY F E + LY+GK+ N+R+R+ ++ P M++ Sbjct: 4 PASYRPAPGSIPETPGVYRFRDEHGRV-LYVGKAKNLRARLANYFADLHTLHPRTQHMVQ 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + + W + E+ AL LE IKE P FN R R ++ +L + + + Sbjct: 63 AASAVDWTVVSTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPSLAVTLHEEFPRLQVMRG 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGA 192 + FG +A+ A + L + + C + GR C + RC+ Sbjct: 123 PKRKGVRYFGPYAHAWAIRETLDLLLRVFPARTCSAGVFKRAGQVGRPCLLGYIDRCSAP 182 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C G+ E H + + + + L+ EM Q Q + + Sbjct: 183 CVGRVDAETHREIVDDFCDFMSGQTGRY-----LRRLEQEMQQAASAQEYERAARLRDDA 237 Query: 253 EATT 256 A Sbjct: 238 GALR 241 >UniRef50_C1B4L2 UvrABC system protein C n=10 Tax=Actinomycetales RepID=UVRC_RHOOB Length = 743 Score = 234 bits (596), Expect = 3e-60, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 90/246 (36%), Gaps = 14/246 (5%) Query: 19 EYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAM 73 P R +P PGVY F + +Y+GK+ ++RSR+ S+ P M Sbjct: 2 PDPSTYRPATGTIPVDPGVYKFRDPHGRV-IYVGKAKSLRSRLNSYFADVSTLHPRTRQM 60 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAK 132 + + + W + E+ AL LE IKE P FN R R ++ L + + ++ Sbjct: 61 VTTAGSVEWTVVSTEVEALQLEYNWIKEFDPRFNVRYRDDKTYPVLAVTLNEEYPRLFVY 120 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCA 190 + FG +++ A + L + + C + GR C + +C+ Sbjct: 121 RGPRRKGVRYFGPYSHAWAIRETLDLLLRVFPARTCSAGVFKRHNQIGRPCLLGYIDKCS 180 Query: 191 GACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS 250 C G+ S EH + + L +++ M Q ++ + Sbjct: 181 APCVGRVSAAEHRKIVEDFCDFLSGRT-----DKLVRQLEARMQQASEELDFETAARLRD 235 Query: 251 LEEATT 256 A Sbjct: 236 DVGALR 241 >UniRef50_A5EW70 UvrABC system protein C n=1 Tax=Dichelobacter nodosus VCS1703A RepID=UVRC_DICNV Length = 607 Score = 234 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 13/241 (5%) Query: 27 FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISW 82 FL+ + T GVY ++ T+ LY+GK+ N+R R+ + + + A++R I Sbjct: 13 FLSHVSTLSGVYQMRDQNGTV-LYVGKAKNLRQRLSHYFQKTGLSVKTRALMRAVYDIQT 71 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNL 142 T E ALLLE LIK+ QP FN LR ++ + L++ ++ + + Sbjct: 72 TSTPTEAEALLLENNLIKQYQPKFNILLRDDKSYPYICLSQHDFPRLFLYRG-ARKNGDF 130 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 FG + N ++A AL + +L L +R R C + +KRC C GK S E + Sbjct: 131 FGPYPNVQSAHHALAILQKVFRL-RPCLDSFFKNRSRPCLQYQIKRCYAPCVGKISAEMY 189 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS-LEEATTLIRTP 261 A ++ + + L L+ M Q Q + V + E T+ + Sbjct: 190 AQTVQHARDFLTGNSEHL-----LQTLTEHMLQASAAQQYERAAIVRDQISELRTIQQKQ 244 Query: 262 A 262 + Sbjct: 245 S 245 >UniRef50_UPI00017881F9 excinuclease ABC, C subunit n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017881F9 Length = 667 Score = 234 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 84/220 (38%), Gaps = 14/220 (6%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQS 77 E++R L LP +PG YL T+ +Y+GK+ +++RV S+ ++ + Sbjct: 15 QENIRHKLALLPDQPGCYLMKNHEGTI-IYVGKAKVLKNRVRSYFTGSHNGKTQMLVSEI 73 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 R +I T + AL+LE LIK QP FN L+ ++ L++ + + Sbjct: 74 RDFEYIVTGSNMEALILECNLIKTHQPRFNVLLKDDKTYPYLKITNEEHPRLEVTRRVLK 133 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG + N AA Q + + L + + + C + +C C + Sbjct: 134 DKAKYFGPYPNAYAAQQTKKLLDRMYPLRKCGVMPKEV-----CLYYHMGQCLAPCVKEV 188 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYH 237 + + L + KE +M + Sbjct: 189 PKSAYEQITGEITSFLSGGHEEIK-----KELQRKMQEAA 223 >UniRef50_Q2S280 UvrABC system protein C n=1 Tax=Salinibacter ruber DSM 13855 RepID=UVRC_SALRD Length = 633 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 12/234 (5%) Query: 17 IYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA---- 72 + + PE L L+ LPT PGVY F + +++ LY+GK+ N+R+RV ++ + + Sbjct: 5 LDDKPEVLVQKLDALPTDPGVYKFLDDEESV-LYVGKAKNLRNRVRTYFQQSRQRDGRIE 63 Query: 73 -MLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYA 131 M++++ + I T E AL+LE IKE QP +N LR ++ + + +R V+ Sbjct: 64 VMVQKAVDVDIIVTDTEAEALILENNQIKELQPRYNVNLRDDKTYPYICIKNERFPRVFK 123 Query: 132 KEVDFSRAPNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGR--ACFRSALK 187 FG +A+ + I +L C L E + G+ C + + Sbjct: 124 TRTVKQDGSEYFGPYADVSKMNSMMDAIRSVFQLRTCSLDLTEEKIEAGKYDVCLQHHID 183 Query: 188 RCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQN 241 C C GK+S ++ + Q + L LK++ + H + Sbjct: 184 NCKAPCVGKQSEADYMETIEQVKKLLNGQTQELMD--LLKDEMQRQSDAHNFEE 235 >UniRef50_D1CFI6 Excinuclease ABC, C subunit n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFI6_THET1 Length = 613 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 107/277 (38%), Gaps = 17/277 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLRQS 77 E + + L +P +PGVYL + + +Y+GK+ +R+RV S+ + M+ Q Sbjct: 8 EEIITRLQAIPEKPGVYLMKDKHGKV-IYVGKAKVLRNRVRSYFSSKHLPEKIREMVPQI 66 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDF 136 I +I T E AL LE LIK P +N + +++L +++ ++ V Sbjct: 67 HDIDYIVTDSEHEALTLEVTLIKHHMPKYNSMFKDDKRLPYIKVTVQEEFPRVLKCRQII 126 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 + +G + +A +A++ I LC+ + R C L RC GAC G+ Sbjct: 127 NDGSKYYGPYTALGSAAEAIKLIHQHFMLCHKENEPIDGKQSRPCLPYYLHRCLGACAGR 186 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 +E+ Q + L ++ +M + + + +A Sbjct: 187 ADPQEYRAATEQVILFLEGKHDELT-----EKLRRKMEEAAENLEFEKAALYRNQIKAIE 241 Query: 257 LIRT------PAGFDHDGYKILCKPLLSGNYEITELD 287 IR P D D I +G + D Sbjct: 242 DIRQRQKVVLPTNEDMDIISIALDGGEAGIERLFIRD 278 >UniRef50_C7RHW1 Excinuclease ABC, C subunit n=4 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RHW1_ANAPD Length = 616 Score = 233 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 99/253 (39%), Gaps = 8/253 (3%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQS 77 ++ L +LP PGVY+ D + +Y+GK+++++ RV + + AM++ Sbjct: 5 QIKEKLKELPDLPGVYIMRNAEDEI-IYVGKAISLKRRVRQYFDNNKNKGAKVLAMVKNI 63 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 +I E+ AL+LE+ LIK+ +P +N LR ++Q +++ +++ + Sbjct: 64 DHFEYIIVQNEVEALVLESNLIKKNRPRYNIVLRDDKQYPYIKICKEKYPRIKKVRQVLK 123 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR-GRACFRSALKRCAGACCGK 196 FG F + A A+ L + +R R C + +C G C K Sbjct: 124 DGGRYFGPFPDAYAVNDAIDLFHLYYPFRTCNLNFDKGARLDRPCLNYFIHKCKGPCVDK 183 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQH-PEMTQYHIIQNWLWLGAVNSLEEAT 255 E + + + ++ L V K + + + + S+ Sbjct: 184 EDEKRYLNHIDDVVKFLENKSEKIPNWVLAKMNDASKDLNFEMAAKYRDYYRALSVISER 243 Query: 256 TLIRTPAGFDHDG 268 + G D D Sbjct: 244 QNVTETGGDDLDI 256 >UniRef50_C7HUD8 UvrABC system, C protein n=2 Tax=Anaerococcus RepID=C7HUD8_9FIRM Length = 615 Score = 232 bits (593), Expect = 8e-60, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 101/255 (39%), Gaps = 10/255 (3%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQ 76 ++ L +LP PGVY+ D + +Y+GK++N++ RV + +M+ Sbjct: 3 NQIKEKLKELPDLPGVYIMRNSQDEI-IYVGKAINLKKRVSQYFDNNKNKGRKVLSMVSH 61 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 +I E+ AL+LE+ LIK+ +P +N LR ++Q +++ ++ + Sbjct: 62 INHFEYIIVENEVEALVLESNLIKKNRPKYNIVLRDDKQYPYIKITNEKFPRIQKVRNVK 121 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR-GRACFRSALKRCAGACCG 195 +G + + A ++ + L + + R C + RC C G Sbjct: 122 KDKGYYYGPYPDAYAVNDVIELFHILYPIRTCNLNFDKGQQLDRPCLNYYIDRCKAPCVG 181 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKE-QHPEMTQYHIIQNWL-WLGAVNSLEE 253 K +E+ + + L V K + E+ + + + A++++ + Sbjct: 182 KGDEKEYMENITKIKNFLENKSDYIPNLVINKMNKASEILDFENAAKYRDYHRALSTISQ 241 Query: 254 ATTLIRTPAGFDHDG 268 + T D D Sbjct: 242 KQKVTTTNGD-DIDI 255 >UniRef50_Q1YU82 DNA polymerase III, epsilon subunit n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YU82_9GAMM Length = 528 Score = 232 bits (593), Expect = 9e-60, Method: Composition-based stats. Identities = 87/310 (28%), Positives = 147/310 (47%), Gaps = 51/310 (16%) Query: 19 EYPEHLRS-FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAM 73 P L++ + LP GVY F+ + + LY+GKS++IR+RV+SH P + + Sbjct: 203 ALPPLLKASDIKKLPASAGVYYFYDANGAL-LYVGKSIHIRNRVMSHFSQDHSNPKDLQI 261 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVY--- 130 + I + T ++GA + E+ IK PL+N+RLR+ ++L + +E R Sbjct: 262 NNKLAHIDFEKTPSDLGAQIRESNQIKALYPLYNRRLRKTKKLYQYRCDEDRNGYQRIAI 321 Query: 131 -AKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRG-------RACF 182 A E+D A FGLF + R A + ++ +AD LC+ LLGLE + + CF Sbjct: 322 EAVELDSDSADERFGLFRSPRQASKQIEKLADHYFLCHKLLGLESSTATTSVATNQKPCF 381 Query: 183 RSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQH---PEMTQYHII 239 R+ LK+C GAC G ES E + R+ +L+ ++ WP+ G + ++E+ PE +H++ Sbjct: 382 RAQLKKCFGACHGAESPENYNERVSAALKTYQLKMWPYPGPILIEERDMQEPEHVAFHVV 441 Query: 240 QNWLWLGAVNSLEEA-------------------------------TTLIRTPAGFDHDG 268 NW ++ + +E+ + + FD D Sbjct: 442 HNWRYIAKLTLIEDLYDHGYQLADARQSIGAGMSADLTAGPNESDQRSATPSDDRFDLDI 501 Query: 269 YKILCKPLLS 278 Y IL + L+ Sbjct: 502 YFILVRFLVD 511 >UniRef50_Q0A8X6 UvrABC system protein C n=19 Tax=Gammaproteobacteria RepID=UVRC_ALHEH Length = 611 Score = 232 bits (593), Expect = 9e-60, Method: Composition-based stats. Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 9/254 (3%) Query: 19 EYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----ML 74 P ++F+ L RPGVY + LY+GK+ N++ RV S+ ++A ML Sbjct: 5 PSPFDPKAFVRSLTQRPGVYRMVDGRGEV-LYVGKARNLKKRVASYFTRSRKSARIELML 63 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKE 133 Q + I T E AL+LE LIKE +P +N LR ++ + L + + + Sbjct: 64 TQVQDIQVTVTHTEAEALILENTLIKELRPRYNVLLRDDKSYPWIYLSSHQDFPRLSFHR 123 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 FG F + A + L T+ ++ +R R C + +KRC C Sbjct: 124 GARKGPGRWFGPFPSGHAVRETLNTLQKVFRI-RQCQDSFFSNRSRPCLQHQIKRCTAPC 182 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALK-EQHPEMTQYHIIQNWL-WLGAVNSL 251 G S E + +R ++ L + + E E ++ + + A+ ++ Sbjct: 183 VGYISREAYQEDVRHAVLFLEGRSNQVIEELGARMEAASERLEFEAAAQYRDRIQALQAV 242 Query: 252 EEATTLIRTPAGFD 265 +E ++ D Sbjct: 243 QERQYIVGEKGDLD 256 >UniRef50_C0N1K0 Exonuclease family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N1K0_9GAMM Length = 488 Score = 232 bits (593), Expect = 9e-60, Method: Composition-based stats. Identities = 99/277 (35%), Positives = 145/277 (52%), Gaps = 20/277 (7%) Query: 20 YPEHL-RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAML 74 P H+ +S ++ LP G+Y F+ + + LYIGKSVNIR RVLSH + E + Sbjct: 191 IPSHVSQSDIDLLPEAAGIYRFYDANGGL-LYIGKSVNIRERVLSHFGQDHQHGKELDIS 249 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAK-- 132 +Q I++ T + GA LLE IK P FN+R + ++L L L + + K Sbjct: 250 QQLHHITFQQTPSDFGAQLLENTEIKHYSPRFNRRQTKTKKLYQLTLTTDKQGYHHLKTE 309 Query: 133 ---EVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRC 189 + + +GLF +R+ A + + + D +LC L G+E RG ACF LK+C Sbjct: 310 VADMTEINTITQRYGLFRSRKQAEKKMLELIDTHRLCQKLCGIEKSQRG-ACFGYQLKKC 368 Query: 190 AGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQ--HPEMTQ--YHIIQNWLWL 245 GACCG ES E + LRL+ +L +L+ WPW G + ++E H + +H+I W +L Sbjct: 369 RGACCGDESAETYNLRLQLALAQLKNQQWPWSGPIVVEEHPVHDDWDDVIFHLIDQWCYL 428 Query: 246 GAVNSLEEATTLI----RTPAGFDHDGYKILCKPLLS 278 G V EE + TP FD D YKIL + LL+ Sbjct: 429 GQVIDNEECLATLSRRQHTPVSFDLDAYKILLRFLLT 465 >UniRef50_C7MCN8 Excinuclease ABC subunit C n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MCN8_BRAFD Length = 650 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 91/245 (37%), Gaps = 23/245 (9%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLR 75 P R +PTRPGVY F E + +Y+GK+ N+R R++++ + M+ Sbjct: 4 PATYRPATGTIPTRPGVYRFRDEHGRV-IYVGKAKNLRQRLVNYFQDLSVLHERTRRMVT 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEV 134 + + W E+ AL LE IKE P FN + R ++ L L ++V V+ Sbjct: 63 TAASVEWTVVGTEVEALTLEYTWIKEFDPRFNVKFRDDKSYPYLVLTMGEKVPRVHITRR 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGA 192 ++ FG + A + L + + C + GR C + +CA Sbjct: 123 PRAKGDRTFGPYPQVGAIRETLDLMLRVFPIRSCTAGVYRRAERSGRPCLLGFIGKCAAP 182 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C G S EEH Q + + + + Q A E Sbjct: 183 CVGDISEEEHRRLAEQFADFMAGNTSKYTRRIE--------------QRMKAAAAAMDYE 228 Query: 253 EATTL 257 A L Sbjct: 229 TAAGL 233 >UniRef50_A1BED8 UvrABC system protein C n=12 Tax=cellular organisms RepID=UVRC_CHLPD Length = 631 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 58/275 (21%), Positives = 102/275 (37%), Gaps = 24/275 (8%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQSRRI 80 + LP+ PGVY F + +YIGK+ N+R+RV S+ R P M+ + I Sbjct: 19 DKVASLPSSPGVYQFKNAQGRV-IYIGKAKNLRNRVRSYFRNPQQLFGKTLVMVGKIADI 77 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 I T+ E+ AL+LE LIKE +P +N L+ ++ L + + + Sbjct: 78 EVIITSSEVEALILENNLIKELKPRYNVNLKDDKTYPYLVITNEPFPRILVTRQVKKDGS 137 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS----RGRACFRSALKRCAGACCGK 196 FG + R L I + L L P + + + C + +C G C G Sbjct: 138 TWFGPYTEARQLRSILDFIGSIFPIRSCKLRLSPENISRGKFKVCLDYHIHKCKGPCEGL 197 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 + EE+ L + + L+ ++ + M + E+A Sbjct: 198 LTEEEYLLMIVEITRLLKGKTS-----ATIRSLNERMLSF---------AKELKFEQAAE 243 Query: 257 LIRTPAGFDHDGYKILCKPLLSGNYEITELDPAND 291 L + + + ++ + ND Sbjct: 244 LKTQIDSLKRYAERQKVVTSDTLDRDVFAVASRND 278 >UniRef50_A0M672 UvrABC system protein C n=7 Tax=Bacteroidetes RepID=UVRC_GRAFK Length = 597 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 59/248 (23%), Positives = 101/248 (40%), Gaps = 20/248 (8%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQS 77 L L LP PGVY + ++ + LY+GK+ N++ RV S+ ++ M+++ Sbjct: 4 PALEVQLKTLPNSPGVYQYFDKNGKI-LYVGKAKNLKKRVTSYFNKNHDSHRIGVMVKKI 62 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 I I A E ALLLE LIK+ QP FN L+ ++ + + +R V+ Sbjct: 63 CEIKHIVVASETDALLLENNLIKKHQPRFNVMLKDDKTYPWICIKNERFPRVFPTRRLIK 122 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRG--RACFRSALKRCAGAC 193 +G F + + L I KL C L + + G + C L C G C Sbjct: 123 DGSEYYGPFTSFKTVNTLLDLIKGLYKLRTCNYDLAEDKIRNGKYKVCLEYHLGNCLGPC 182 Query: 194 CGKESHEEHALRL-----------RQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNW 242 G + EE+ + + SL+R R + ++ + +++N+ Sbjct: 183 EGFQPEEEYNNNIEAIRQIVKGNFKDSLQRFRNQMKQHSEKMEFEDAQRIKNKIDVLENY 242 Query: 243 LWLGAVNS 250 V + Sbjct: 243 QAKSTVVN 250 >UniRef50_A0QWV6 UvrABC system protein C n=27 Tax=Actinomycetales RepID=UVRC_MYCS2 Length = 706 Score = 232 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 85/247 (34%), Gaps = 23/247 (9%) Query: 19 EYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAM 73 P R +P PGVY F + +Y+GK+ ++RSR+ S+ P M Sbjct: 2 PDPATYRPAPGSIPVEPGVYRFRDPHGRV-IYVGKAKSLRSRLTSYFADITSLAPRTRQM 60 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAK 132 + + + W E+ AL LE IKE P FN R R ++ L + + + Sbjct: 61 VMTAGSVEWTVVTTEVEALQLEYNWIKEFDPRFNVRYRDDKSYPVLAVTLNEEYPRLMVY 120 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCA 190 + FG +++ A + L + + C + R C + +C+ Sbjct: 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHKQIDRPCLLGYIDKCS 180 Query: 191 GACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS 250 C G+ S E+H + + L + + Q Sbjct: 181 APCVGRVSAEQHRQIVLDFCDFLGGK--------------TDRLAKDMEQQMTAAAEQLD 226 Query: 251 LEEATTL 257 E A L Sbjct: 227 FERAARL 233 >UniRef50_Q0BPX7 UvrABC system protein C n=43 Tax=Alphaproteobacteria RepID=UVRC_GRABC Length = 644 Score = 232 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 104/254 (40%), Gaps = 13/254 (5%) Query: 3 RRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVL 62 + +P L A + + + L LP RPGVY LY+GK+ +++ RV Sbjct: 12 KEADNPSLPIVEAPPGKGVTVIEAMLKLLPDRPGVYRMLDGQGE-ALYVGKARSLKKRVA 70 Query: 63 SHLR----TPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCA 118 S+ + M+ ++ + + T E ALLLEA LIK +P FN LR ++ Sbjct: 71 SYTQIHRLPERLRRMVSETVSMEIVTTHTEAEALLLEANLIKRLKPRFNIVLRDDKSYPW 130 Query: 119 LQLNEKR--VDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS 176 L L E ++ + +A + +G FA+ A Q + + L + Sbjct: 131 LMLTEDHAFPQIMKHRGAQTRKAASYWGPFASAWAVNQTVTAMQRIF-LLRSCSDSVFAN 189 Query: 177 RGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQY 236 R R C ++RC+ C + S E++A + Q+ L +G ++ +M Q Sbjct: 190 RSRPCLLFQIRRCSAPCVDRISQEDYAELVDQARAFLSG-----RGTEIQRDLARQMEQA 244 Query: 237 HIIQNWLWLGAVNS 250 + A+ Sbjct: 245 AEALEFERAAAIRD 258 >UniRef50_Q72DX8 UvrABC system protein C n=3 Tax=Desulfovibrio vulgaris RepID=UVRC_DESVH Length = 688 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 107/253 (42%), Gaps = 15/253 (5%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRR 79 R L+ +P PGVYL+ ES + +Y+GK+ +R RV S+ R TP AMLR + Sbjct: 3 RPDLSTIPLTPGVYLYKDESGRI-IYVGKARCLRRRVASYFRDVSALTPKTVAMLRHAVT 61 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKEVDFSR 138 I + T E ALLLEA LIK+ +P +N LR ++Q ++ K + Sbjct: 62 IDTLSTTTEKEALLLEASLIKKHRPRYNIVLRDDKQYVLFRIGAKHPYPRLEIVRKARRD 121 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG F + AA + +TI L +R RAC + +C G C + Sbjct: 122 DGRYFGPFTSASAARETWKTIHRAFPL-RRCSDRAFGNRVRACLYHHMGQCLGPCVNEVP 180 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKE----QHPEMTQYHIIQNWLWLGAVNSLEEA 254 E +A L Q L A+ + Q + + ++++ + +A Sbjct: 181 SETYAALLEQVSLLLSGRSGELVDALRTEMEAASQGLDFERAAVLRDRIRALERTVERQA 240 Query: 255 TTLIRTPAGFDHD 267 L P G D D Sbjct: 241 AVL---PGGGDLD 250 >UniRef50_Q4JVI8 UvrABC system protein C n=8 Tax=Corynebacterium RepID=UVRC_CORJK Length = 690 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 104/251 (41%), Gaps = 16/251 (6%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQSR 78 R +PT PGVY F + + +Y+GK+ N+R+R+ ++ + P AM++ + Sbjct: 6 YRPEPGSIPTDPGVYTFRDAHERV-IYVGKAKNLRARLSNYFQDLDQLHPRTRAMVQSAN 64 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS 137 + W + E+ AL LE IK P FN R ++ L ++ ++++ + Sbjct: 65 HVQWTVVSSELEALNLEYTWIKRFNPRFNVMYRDDKTYPMLAISVKEQIPRAFMYRGPRR 124 Query: 138 RAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 + FG + A + L+++ + C + + GR C + RC+ C G Sbjct: 125 KGVRYFGPYPKAWAIRETLESLTRVFPIRTCSAGVYRRHEALGRPCLLGYIDRCSAPCVG 184 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA- 254 K + E+H + Q L P L+ EM Q ++ ++ +A Sbjct: 185 KITPEDHRALVDQFSSFLAGNTEP-----VLRRVRKEMEQASENLDFERAASLRDQLQAM 239 Query: 255 -TTLIRTPAGF 264 ++ R F Sbjct: 240 QKSMERQAVVF 250 >UniRef50_Q5LIY7 UvrABC system protein C n=26 Tax=Bacteroidetes RepID=UVRC_BACFN Length = 608 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 104/243 (42%), Gaps = 20/243 (8%) Query: 20 YPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLR 75 E+L+ +++LP +PG+Y + T+ +Y+GK+ N++ RV S+ + ++ Sbjct: 9 TSEYLKGIVSNLPEKPGIYQYLNAEGTI-IYVGKAKNLKRRVYSYFSKEHQPGKTRVLVS 67 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVD 135 + I +I E ALLLE LIK+ +P +N L+ ++ ++ + + V+ Sbjct: 68 KIADIRYIVVNSEEDALLLENNLIKKYKPRYNVLLKDDKTYPSICVQNEYFPRVFKTRRI 127 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS----RGRACFRSALKRCAG 191 + +G +++ + L I L L L P + + C +K CAG Sbjct: 128 IRNGSSYYGPYSHSPSMHAVLDLIKHLYPLRTCNLNLSPENIRAGKFNVCLEYHIKNCAG 187 Query: 192 ACCGKESHEEHALRLRQSLERLRV-----------VCWPWQGAVALKEQHPEMTQYHIIQ 240 C G +S EE+ + + E L+ + +E +Y +I+ Sbjct: 188 PCIGLQSQEEYLKNIAEIKEILKGNTQEISRLLYQRMQDLAAEMKFEEAQKVKEKYALIE 247 Query: 241 NWL 243 N+ Sbjct: 248 NYR 250 >UniRef50_B9KY82 Excinuclease ABC, C subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KY82_THERP Length = 625 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 58/255 (22%), Positives = 97/255 (38%), Gaps = 16/255 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQ 76 + ++ L L PGVYL + +Y+GK+ ++R R+ S+ + ++ Q Sbjct: 15 QVIQERLAALEPAPGVYLMKDAQGRV-IYVGKASSLRQRLRSYFSSHSSMDAKTRELVSQ 73 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 I T AL+LE LIK +P FN LR ++ +++ + V A Sbjct: 74 IADFEVIRTDTPTEALILENELIKRYRPRFNIMLRDDKTYPFIRITNEPFPRVIATRRIV 133 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL-SRGRACFRSALKRCAGACCG 195 FG + + A + L + Y +E + RAC + RCAG C G Sbjct: 134 RDGSRYFGPYPSAGAVHRTLDLLKRLFP--YRACDIEITGTASRACLYYHIGRCAGPCIG 191 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAV-ALKEQHPEMTQYH----IIQNWLWLGAVNS 250 S EE+ + + L + A E+ E ++ I + V Sbjct: 192 AVSQEEYRGIIDNVVLFLEGRAEAVVARLQAAMEEAAERLEFERAARIRDELRAIQHVLQ 251 Query: 251 LEEATTLIRTPAGFD 265 ++ T T FD Sbjct: 252 QQKIVT--GTDESFD 264 >UniRef50_D1NSJ5 Excinuclease ABC subunit C n=3 Tax=Actinobacteridae RepID=D1NSJ5_9BIFI Length = 841 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 106/253 (41%), Gaps = 15/253 (5%) Query: 13 EAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----- 67 A + + + R + +P PGVY + + +Y+GK+ N+R+R+ ++ + Sbjct: 36 GAPLLGDSRDLFRPKTSQIPAEPGVYKWRDGQGRV-IYVGKAKNLRNRLSNYFQPLHQLH 94 Query: 68 PDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRV 126 P M+ +R + W E+ AL LE IKE P FN R ++ L ++ +R+ Sbjct: 95 PRTQTMVLTARSLEWTVVGTELEALTLEYTWIKEFDPRFNVVFRDDKTYPYLAVSVGERI 154 Query: 127 DVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRS 184 + R FG +A ++L T+ + C + + R C + Sbjct: 155 ARTWVTRSRKRRDTRYFGPYAKVWDLRKSLDTLLRTFPVRTCTPAVFKKAQLTNRPCLLA 214 Query: 185 ALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLW 244 ++ +C+ C G+ S ++H RQ + +L V G + + +M Q Q+ + Sbjct: 215 SIGKCSAPCVGRISAQDH----RQLVSQLVGVLTGRIGQSYIADLTRQMKQAS--QDLEF 268 Query: 245 LGAVNSLEEATTL 257 A ++ L Sbjct: 269 EKAARLRDQIGML 281 >UniRef50_B1CBT5 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBT5_9FIRM Length = 622 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 104/239 (43%), Gaps = 13/239 (5%) Query: 19 EYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAM 73 Y ++L + + LP GVYL E+ T+ +Y+GK+ +++RV + R TP M Sbjct: 4 AYSKNLNNKIKLLPENSGVYLMKDENGTI-IYVGKAKVLKNRVTQYFRKNSNHTPKVLKM 62 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAK 132 + +I T E+ AL+LE LIK+ +P +N +R ++ +++ + ++ Sbjct: 63 VENIADFEYIITNNEMEALILECNLIKKYRPYYNILMRDDKTYPYIKITIKDEYPKLFVT 122 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEP-LSRGRACFRSALKRCAG 191 + FG +AN A +A+ TI + + L+ + +G C + +C G Sbjct: 123 RKYINDGNKYFGPYANATYAKKAVSTINELYPIAMCKKELKSGVKKGNVCLNYHIGQCLG 182 Query: 192 ACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS 250 C G + + +++ ++ L ++ +M Y ++ G V Sbjct: 183 VCQGNIDTKLYNRYIKEIIDILNGKTSK-----IIQSLENKMNGYSENLDFENAGKVRD 236 >UniRef50_Q11YP9 UvrABC system protein C n=3 Tax=Bacteroidetes RepID=UVRC_CYTH3 Length = 596 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 110/263 (41%), Gaps = 11/263 (4%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQ 76 E +RS L +LP+ PGVY F+ + +Y+GK+ ++R RV ++ +M+R+ Sbjct: 5 EDIRSLLKELPSSPGVYRFYSIEKEL-IYVGKAKSLRKRVANYFTNKKNLDQKTRSMVRK 63 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 + E ALLLE LIKE +P +N LR ++ + L+ + Sbjct: 64 IYHAEYTLVNSEYEALLLENNLIKENKPKYNVLLRDDKTYPFICLSSADFPTLTTTRKID 123 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPL--SRGRACFRSALKRCAGA 192 + FG + + RA ++++ + C L + + + + C + C G Sbjct: 124 KKKGEYFGPYTSGRAMHSLVESLRKTFFIRTCDLNLTKQNIDAHKFKVCLEYHIGNCKGP 183 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQ-HPEMTQYHIIQNWLWLGAVNSL 251 C GK+ E++ + + Q L+ + K E Q+ Q + Sbjct: 184 CEGKQEKEDYDVSIIQVRNILKGNFSSVKKYYQEKMLSAAEDMQFEKAQFFKERYNSVLG 243 Query: 252 EEATTLIRTPAGFDHDGYKILCK 274 E ++LI P + + Y I+ + Sbjct: 244 LEKSSLIVNPDINNLEVYTIVKR 266 >UniRef50_C3JAE7 Excinuclease ABC subunit C n=2 Tax=Bacteria RepID=C3JAE7_9PORP Length = 604 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 104/275 (37%), Gaps = 23/275 (8%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLRQS 77 E ++ L LP PG Y ++ + +Y+GK+ N+R RV S+ + ++ Q Sbjct: 4 EEIKKILPTLPLSPGCYQYYNAEGEI-IYVGKAKNLRRRVSSYFQKEHTDRKTRQLVAQI 62 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 + +I A E ALLLE LIK QP +N L+ ++ ++ + + ++ Sbjct: 63 VDVKYIVVANESDALLLENNLIKTYQPKYNILLKDDKSYPSIVVTREPFPRIFVTRTIDP 122 Query: 138 RAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRA--CFRSALKRCAGAC 193 + +G + + A + I + + C E + RG+ C + +KRC C Sbjct: 123 SWGDYYGPYTSVAMAHGMVGIIREMYKVRTCRHRFTQEAIERGKYARCLQYHIKRCEAPC 182 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 G S E++ + ++E L+ + L L EE Sbjct: 183 EGLVSREDYLNNIAAAVELLKG--------------NLRQVIQQTTSRMLALSEELRYEE 228 Query: 254 ATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDP 288 A A K + P + ++ + Sbjct: 229 AGQEKARLAMLQAYSTKHIVAPETRHDIDVFSYEE 263 >UniRef50_Q6MKS2 UvrABC system protein C n=1 Tax=Bdellovibrio bacteriovorus RepID=UVRC_BDEBA Length = 630 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 13/246 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQ 76 E +R + + PT+ GVYL +D + +YIGK+ N+R+RV S+ +P ++ Sbjct: 7 EEVRDKVKEFPTQSGVYLMKNTADKI-IYIGKAKNLRNRVRSYFNDSKDHSPKTRLLVSN 65 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD 135 + +I T E+ A LLEA LIK+ +P +N RLR ++ ++ + + +Y Sbjct: 66 ICEVEYILTKTEVEAFLLEASLIKKHRPKYNIRLRDDKAYPYIRFSWGDQAPRLYLARKV 125 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 FG + + A ++ + K+ SR R C + RC C Sbjct: 126 KKDGSLYFGPYTSGLAVHGTIKFLNRTFKI-RDCTDAVFKSRTRPCMTYQIGRCTAPCVK 184 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 + E++ + + L+ Q +K +M + + + EA Sbjct: 185 YITMEDYRNEVEGAKLFLKG-----QNKKVIKSMTEKMMGAADEEKFEVAARLRDSIEAI 239 Query: 256 TLIRTP 261 I Sbjct: 240 KAILQK 245 >UniRef50_B0S0L4 UvrABC system protein C n=2 Tax=Finegoldia magna RepID=UVRC_FINM2 Length = 608 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 98/244 (40%), Gaps = 10/244 (4%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE----AAMLRQSR 78 ++ L +P +PGVY+ H ++D + +Y+GK++++R RV + + + AAM+ Sbjct: 3 DIKKELQKVPHKPGVYIMHDKNDEI-IYVGKAIDLRRRVGQYFDSSKKLAKVAAMVSHVE 61 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 +I E AL+LE+ LIK+ P +N LR ++Q +++ ++ V Sbjct: 62 YFEYIIVNNECEALVLESNLIKKNSPKYNIVLRDDKQYPYIKITNEKFPRVLKTRRVLKD 121 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR-GRACFRSALKRCAGACCGKE 197 FG F N A + I + K+ L + + R C + RC G C Sbjct: 122 KAKYFGPFPNAYAVNDIIDLIHETYKIRTCNLNFDKGQKLKRPCLNYYINRCDGMCVYDV 181 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + E++ L + L + M + L +S+ + Sbjct: 182 NEEDYNKELLEVENFLNGREDELTKKLT----DKMMAASKNLNFELAAKLRDSITNIQVI 237 Query: 258 IRTP 261 + Sbjct: 238 LEKQ 241 >UniRef50_C6NXT8 Excinuclease ABC subunit C n=2 Tax=Gammaproteobacteria RepID=C6NXT8_9GAMM Length = 624 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 65/290 (22%), Positives = 114/290 (39%), Gaps = 21/290 (7%) Query: 8 PRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-- 65 + E I + P L+ FL L ++PGVY + LY+GK+ N++ RV S+ Sbjct: 5 VQARSERPEIQDEPFDLKLFLRSLGSQPGVYQMLAADGHI-LYVGKARNLKRRVSSYFQK 63 Query: 66 --RTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE 123 +P AML Q R+ + T E AL+LEA+LIK+ +P +N LR ++ L ++ Sbjct: 64 TRHSPKTLAMLAQVARVEVLVTHTETEALVLEAQLIKKHRPHYNILLRDDKSYPYLYIDT 123 Query: 124 KR-VDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACF 182 + + FG + A +++ + +L + +R RAC Sbjct: 124 SSAFPRMSLHRGTQRGKGHYFGPYPAVSALRESMVLLQKAFRLRTCEDSVFH-NRSRACL 182 Query: 183 RSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNW 242 ++RC+G C G + + L+ +L L+ + + Q Sbjct: 183 HYQIRRCSGPCVGHIDEKSYHRDLQDALRFLQGK--------------SDEAIRTLQQRM 228 Query: 243 LWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 L EEA A + G++++ A+ Q Sbjct: 229 LAAAERLDFEEAARRRDQIAALSKIQERQYVAQAGGGDFDVLAAVEADGQ 278 >UniRef50_B5YHU3 Excinuclease ABC, C subunit n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHU3_THEYD Length = 589 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 12/239 (5%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAAMLRQSRRISWI 83 LN +P+ PGVYLF + LY+GK+ N+R+R+ S+ ++ P ++ M++ + S+I Sbjct: 4 LNTVPSLPGVYLFKDSKGKV-LYVGKAKNLRNRLKSYFQSDDLDPRKSKMVKLIKDFSYI 62 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAPNL 142 T+ E AL+LEA LIK+ +P FN LR ++ L++ + + Sbjct: 63 VTSNEFEALVLEANLIKQHKPSFNVLLRDDKSYPYLRITVVEEWPKIDVVRKPKKDGNLY 122 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 FG + ++ +AL I + L R C + +KRC C G S E++ Sbjct: 123 FGPYVPAQSMWEALSFIRRNFPIRTCKYRLNKPI--RPCVQYQMKRCPAPCAGFISREDY 180 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTP 261 + + + L+ L E+ ++ H ++ + + + Sbjct: 181 MKGVNEVVLFLKGQKTELLN--ILYEKMQKL--SHELKFEAAAKIRDQIRRLEKIFTQQ 235 >UniRef50_A0Q5Q7 UvrABC system protein C n=18 Tax=Francisella RepID=UVRC_FRATN Length = 612 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 99/242 (40%), Gaps = 14/242 (5%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQSR 78 L+SFL +L T GVY + + +Y+GK+ N+++RV S+ + M+ Q Sbjct: 10 DLKSFLANLTTHSGVYRMLDKHGEI-IYVGKAKNLKNRVNSYFSKGAKDSKTLMMVEQIA 68 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS- 137 RI T + A LLE LIK+ +P +N + ++ L ++ + V + Sbjct: 69 RIEITITPSDYEAYLLENNLIKQHRPKYNILFKDDKSYPYLVISRDKFPRVSFYRGKSAY 128 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 + FG + + + L TI + SR R C + +KRC C G Sbjct: 129 KKGQCFGPYVSISSVKNTLNTIQKIFPI-RQCENSYYKSRVRPCLQYQIKRCLAPCVGLV 187 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 S +++ +L + L L+E +M Q ++ + A ++ L Sbjct: 188 SQQQYDEQLAILKKFLAGKFST-----VLEEISAKMYQAS--EDMEYEKAQVYRDQLVVL 240 Query: 258 IR 259 + Sbjct: 241 RK 242 >UniRef50_D1BLY6 Excinuclease ABC, C subunit n=5 Tax=Veillonellaceae RepID=D1BLY6_VEIPT Length = 608 Score = 230 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 13/252 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQ 76 E L ++ LPT PGVYL+ + + + +Y+GK++N+R+RV S++R P AM+++ Sbjct: 4 EELLEKVSHLPTTPGVYLWRDQYNRI-IYVGKAINLRNRVRSYVRNDANRAPKVTAMMKR 62 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD 135 + + I T E+ AL+LE LIKE +P +N RLR ++ ++++ ++ VY Sbjct: 63 AVDVEVIQTKTEMEALILENTLIKEHEPKYNIRLRDDKTYPYVKISVQEDYPRVYMTRRL 122 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 FG F + + L+ I L + + R C + + C C Sbjct: 123 ERDGAKYFGPFTDVTSVHVVLKLIRQYYPL----RTCKSMKVERPCLQYHMHYCEAPCFN 178 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALK-EQHPEMTQYHIIQNWL-WLGAVNSLEE 253 K S ++ + + +E P + K E E ++ + L ++ ++E Sbjct: 179 KISVPDYRKYIDEIIELFEGKPIPLLKEIKSKMEAAAEDLRFEDAARYRDQLSSIEKIQE 238 Query: 254 ATTLIRTPAGFD 265 ++ D Sbjct: 239 KQRMVTQRGDLD 250 >UniRef50_C7LTD0 Excinuclease ABC, C subunit n=2 Tax=Desulfovibrionales RepID=C7LTD0_DESBD Length = 605 Score = 230 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 61/239 (25%), Positives = 94/239 (39%), Gaps = 22/239 (9%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRR 79 R L PT PGVYL + + +Y+GK+ ++R R+ S+ + P M+ + Sbjct: 4 RKILPSFPTCPGVYLMKNATGRI-IYVGKAKHLRRRLASYFQPEHRLAPKVRVMMTRVET 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEVDFSR 138 I ++CT+ E ALLLEA LIK+ +P +N LR ++Q L+ + Sbjct: 63 IDFLCTSTEKEALLLEASLIKKHRPKYNIVLRDDKQYVLFCLSRNHPFPALRLTRKVLRD 122 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG F + +A + + I L +R R C + + RC G CC S Sbjct: 123 GSVYFGPFTSALSARETKRVIDRLFPL-RKCRDTVFSNRTRPCLQYHIGRCLGPCCLPVS 181 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 EE+ +R+ L M H + L E A L Sbjct: 182 EEEYRQVVRRVELFLSGKS------------DELMAGLH--DQMMRLSDALDFEGAARL 226 >UniRef50_A4AB96 Excinuclease ABC subunit C n=3 Tax=unclassified Gammaproteobacteria RepID=A4AB96_9GAMM Length = 416 Score = 230 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 100/275 (36%), Positives = 145/275 (52%), Gaps = 28/275 (10%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE----AAMLRQSRRIS 81 LN P PGVY F+ E DT+ LYIGKS++I +R+ SH E M+ RI Sbjct: 93 EALNAAPRCPGVYRFYSEEDTL-LYIGKSIDIGTRLNSHFADAREPGRQQRMMSAVHRID 151 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF----S 137 TAGE+GALL+E IK + PL+N+R RR+R+L +L E + DF Sbjct: 152 CQLTAGEVGALLIENAAIKAETPLYNRRQRRSRKLWTQRLQEDVEGFLQVIPSDFCPAGE 211 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGR-ACFRSALKRCAGACCGK 196 R ++FGLF +R+ +L+++A + LC +LG E RGR CF + RC GAC GK Sbjct: 212 RIESVFGLFRSRKHIDNSLRSLARDNGLCLRMLGAE---RGRGPCFGHQVGRCHGACAGK 268 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPE-------------MTQYHIIQNWL 243 ES + H RL Q+L++ R+ WP+ G V L+E+ + Q+H+I +W Sbjct: 269 ESADAHNSRLLQALDKQRIAAWPFAGPVLLQEERDKDSRYTGESSPLQPKRQFHLINHWS 328 Query: 244 WLGAVNSLEEATTLIRTPAG--FDHDGYKILCKPL 276 +LG + A + + FD D Y+I + L Sbjct: 329 YLGTFERRDRARQAAKRDSDLIFDRDTYRIAVRSL 363 >UniRef50_B6IZT9 UvrABC system protein C n=6 Tax=Coxiella burnetii RepID=UVRC_COXB2 Length = 609 Score = 230 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 55/240 (22%), Positives = 92/240 (38%), Gaps = 10/240 (4%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSRRISW 82 +FL LPT GVY + +Y+GK+ N++ RV S+ R AM+ Q + I Sbjct: 8 AFLKTLPTGSGVYQMQDAQGKV-IYVGKARNLQKRVSSYFRRQLDSKTQAMMAQVQSIQT 66 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSRAPN 141 T E ALLLEA IK+ +P +N LR ++ L L ++ + Sbjct: 67 TITRNENEALLLEASFIKQFRPRYNVLLRDDKSYPYLYLATHQKFPRLDFYRGAKKAPGR 126 Query: 142 LFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEE 201 FG + N + + L I KL +R R C + +KRC C G + +E Sbjct: 127 YFGPYPNAGSVRENLALIQKLFKL-RQCSESFFKNRTRPCLQYQIKRCTAPCVGYVNEQE 185 Query: 202 HALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTP 261 + ++ ++ V +K + + + + L + Sbjct: 186 YRRQVEDAILFFEGK----NDQVIIKLTERMEVASENLVFEEAAHYRDQIRQLRRLQKQQ 241 >UniRef50_A0LHP7 Excinuclease ABC, C subunit n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHP7_SYNFM Length = 677 Score = 230 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 15/257 (5%) Query: 12 FEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP--- 68 A + P L S P PGVYLF S + LY+GK++++R R+ S+ ++ Sbjct: 57 DGAVPCDDSPS-LLSKTASFPHLPGVYLFKDASGAV-LYVGKAIDLRKRIASYFKSTGPI 114 Query: 69 --DEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKR 125 A++ ++ + ++ T+ E ALLLEA LIK+ +P +N LR ++ AL+++ + Sbjct: 115 PVKTRALMGKAADMEYVVTSNEKEALLLEASLIKKHRPRYNVVLRDDKNYPALRIDPREP 174 Query: 126 VDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSA 185 + FG + + A + L+ + L G L+R R C + Sbjct: 175 FPRLEVVRRFQRDGALYFGPYHSAYALRETLRLLHQLFPL-RLCKGKRLLARERPCLNYS 233 Query: 186 LKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWL 245 L RC GAC G+ S E++ + + + L+ V ++ M N+ Sbjct: 234 LGRCLGACAGRVSPEDYHKMVDEVVLFLQGKT-----DVLQQQLRRRMADAAEALNFELA 288 Query: 246 GAVNS-LEEATTLIRTP 261 L+ +++ Sbjct: 289 AYYRDRLQGIASMLEKQ 305 >UniRef50_Q6MDC8 UvrABC system protein C n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=UVRC_PARUW Length = 610 Score = 230 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 21/257 (8%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAM-----LRQSRRI 80 ++ PT PGVYL E + LY+GK+ N+R RV + + + + + I Sbjct: 6 KKIDLFPTLPGVYLMKNEEGEV-LYVGKAKNLRQRVKQYFVPGRDGRLMIPYLVAKINYI 64 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVD---VVYAKEVDFS 137 I E ALLLE LIK+ +P +N L+ ++ AL++++ + + Sbjct: 65 ETIVVTSEKEALLLENNLIKQHKPRYNALLKDDKSYIALKISQNDAWATVRLVRYKGTPE 124 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG + + +AA Q L + L E R R C +KRC G C K Sbjct: 125 PDGLYFGPYTSAQAARQTLDLLNRLFPL-RQCSDQEFARRTRPCLLYQMKRCVGPCTQKC 183 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEM----TQYHIIQNWLWLGAVNSLEE 253 + E+ L ++++ LR Q LK+ + EM Q + L + +E+ Sbjct: 184 TKGEYQQHLDRTIKFLRG-----QNKDVLKDLYEEMRLLSEQLEFEKANHLLRTIRYIEK 238 Query: 254 ATT--LIRTPAGFDHDG 268 + P G D D Sbjct: 239 TIESQYVDRPLGHDADA 255 >UniRef50_A1AWP2 Excinuclease ABC subunit C n=1 Tax=Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) RepID=A1AWP2_RUTMC Length = 594 Score = 229 bits (585), Expect = 6e-59, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 102/264 (38%), Gaps = 15/264 (5%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE----AAMLRQSRR 79 ++ L +L T PGVY + D + +Y+GK+ N+++RV S+ E ++ + Sbjct: 3 IQEKLKNLTTNPGVYQMFDKQDQV-IYVGKAKNLKNRVSSYFVKTHEQNKARVLVANIKD 61 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRA 139 I TA E ALLLE+ LIK+ P +N L+ ++ + ++ + V ++ Sbjct: 62 FKVIVTATETQALLLESELIKQHMPRYNILLKDSKSYPYIFISHDKHPRVGFYRGKKCQS 121 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 FG + + +L + K+ SR R C + C+ C K S Sbjct: 122 AQYFGPYPSAHVVRDSLSLLKKIFKV-RQCTNSTYRSRSRPCLEYQIGLCSAPCVNKISD 180 Query: 200 EEHALRLRQSLERL----RVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 E + + L R + L ++ E +++ L L Sbjct: 181 ENYQSDVLMMSLFLSGKGRETLERVSKKMQLASKNLEFELAARLRDQL-----IDLRTIQ 235 Query: 256 TLIRTPAGFDHDGYKILCKPLLSG 279 + + D D I + ++G Sbjct: 236 EQHTSSSSNDLDVVSIAQQDGVNG 259 >UniRef50_A3JBF5 Putative uncharacterized protein n=2 Tax=Marinobacter RepID=A3JBF5_9ALTE Length = 483 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 109/282 (38%), Positives = 156/282 (55%), Gaps = 17/282 (6%) Query: 20 YPEHL-RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA----AML 74 P HL L +LP PGVY F+GE+D + LY+GKS NI RV SH + + Sbjct: 193 IPSHLPLDTLQELPRGPGVYRFYGENDAL-LYVGKSTNIAQRVASHFSGDHNSTRGVRIS 251 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN---EKRVDVVYA 131 RR+ W TAGE+GALLLE + IK +PLFN+R R + L +++L + + Sbjct: 252 ESLRRVDWTETAGELGALLLELKQIKGLRPLFNRRSRAAKNLVSIELTTNAQGYLQARLI 311 Query: 132 KEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAG 191 +E+D R + +GLF ++R A +AL +IA + +LC LLGLEP G CF+ AL RC G Sbjct: 312 REIDPGRLGDYYGLFRSKRDAERALASIAAKNELCNRLLGLEPEHSG-PCFQRALGRCQG 370 Query: 192 ACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHP--EMTQYHIIQNWLWLGAVN 249 AC G+E + LR++ + LR+ WPW+G VA+ E++ T ++ NW+ + V+ Sbjct: 371 ACEGREDPLRYNLRMQIAFHSLRLQTWPWKGPVAIIERNEISHKTDVLVVHNWVHVATVH 430 Query: 250 SLEEA--TTLIRTPAGFDHDGYKILCKPLL---SGNYEITEL 286 E +L FD D YK+L K LL G + I L Sbjct: 431 DDHELDSLSLGGQAVNFDLDSYKLLAKALLGKDRGQFRIQPL 472 >UniRef50_C6E9G2 UvrABC system protein C n=3 Tax=Geobacter RepID=UVRC_GEOSM Length = 649 Score = 229 bits (584), Expect = 9e-59, Method: Composition-based stats. Identities = 51/200 (25%), Positives = 98/200 (49%), Gaps = 8/200 (4%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQSRR 79 ++ + + P+ PGVYL DT+ +Y+GK+ N++ RV S+ ++ M++ Sbjct: 4 QAMIENFPSSPGVYLMKSADDTV-IYVGKARNLKKRVRSYAGDTRDSRIHIRFMVQLVHS 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSR 138 + ++ T E AL+LE LIK+ +P +N LR ++ +L+++ +++ + S Sbjct: 63 VDYLVTDTEKEALILENTLIKQHRPKYNINLRDDKTYFSLRMDMKEQFPRLSIVRKIPSD 122 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG +A+ AA + L+ + L + L ++R R C +K+C+ CCG S Sbjct: 123 GARYFGPYASATAAKEVLKQLYKMFPLRHYPLAT-CMARKRPCLYHQIKQCSAPCCGLIS 181 Query: 199 HEEHALRLRQSLERLRVVCW 218 E+A + + L Sbjct: 182 AAEYAALAQGAALFLEGKNN 201 >UniRef50_Q0B0A0 UvrABC system protein C n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=UVRC_SYNWW Length = 601 Score = 229 bits (584), Expect = 9e-59, Method: Composition-based stats. Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 16/272 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQ 76 E L+ L +P +PGVYLF + + LY+GK+ +R R+ S+ + P AM+ Sbjct: 4 EMLKERLKKVPLQPGVYLFKNQEGQV-LYVGKARVLRQRMRSYFQAPERMHPKVKAMMAW 62 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD 135 +I T E+ AL+LE LIK +P +N LR ++ +++ + VY Sbjct: 63 VSDFDFIVTHSEMEALILENNLIKSYKPRYNIDLRDDKSYPYIKVTVADKFPRVYLAREK 122 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 FG + + + L+ + L SR R C + +C C G Sbjct: 123 KDGVSRYFGPYTDVTSLRDTLKLLNGVFGLRSC---RTMKSRRRPCLNRDMGKCLSPCSG 179 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 + S EE++ +++ + L ++E+ EM + + ++ Sbjct: 180 EISEEEYSQKVQALITFLEGDF-----QEIVREKEKEMAMAARSLEFEKAARLRDQIQSL 234 Query: 256 TLIRTPAGFDHDG-YKILCKPLLSGNYEITEL 286 + + Y++ +LSG E L Sbjct: 235 RQLGEKQKIELASPYELDLVGMLSGEKENLVL 266 >UniRef50_C6NVW4 DNA polymerase III epsilon subunit n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVW4_9GAMM Length = 475 Score = 229 bits (584), Expect = 9e-59, Method: Composition-based stats. Identities = 103/264 (39%), Positives = 138/264 (52%), Gaps = 8/264 (3%) Query: 19 EYPEHLRSF-LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAM 73 P L + L+ LP RPGVYL + E+D++ LY+GKS+ +R RV H E + Sbjct: 187 ALPGSLDAQTLDALPDRPGVYLCYDEADSL-LYVGKSIRLRERVWDHFYAATSQQREMRL 245 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKE 133 ++Q RR+ WI T E+ ALLLEARLIKE+QP+ N+RLRR L + Sbjct: 246 VQQIRRLEWIETPTELSALLLEARLIKERQPILNRRLRRRENLFTIAWEGIERGSPRIVP 305 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 + L+G FAN A Q+L+ +A LC LGLE + G CF LK+C GAC Sbjct: 306 LRDCDGGELYGSFANAYRARQSLRRLARRHGLCLKALGLEKPTSG-PCFAHQLKQCRGAC 364 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLG-AVNSLE 252 CG ES H LRL +L LR+ WPW G + L E+ YH++ W+ G + + Sbjct: 365 CGAESRLLHDLRLSAALRHLRIEHWPWDGPMVLVEEGGGQRLYHLLWQWIHCGYRADPAD 424 Query: 253 EATTLIRTPAGFDHDGYKILCKPL 276 AT R FD D Y+I L Sbjct: 425 LATLWERREGEFDMDIYRICFNAL 448 >UniRef50_C1SGC9 Excinuclease ABC, C subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGC9_9BACT Length = 599 Score = 229 bits (584), Expect = 9e-59, Method: Composition-based stats. Identities = 54/242 (22%), Positives = 102/242 (42%), Gaps = 23/242 (9%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSR 78 + L ++P PG+YL+ G++ + LY+GK+ N+R+RV S+ + ML+ +R Sbjct: 2 FKPVLKEIPENPGIYLYLGKNGEI-LYVGKAKNLRNRVSSYFVDFESKPIRTRKMLQSAR 60 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 I ++ T E ALLLE +IK ++P +N RL+ ++ + + E+ + + + Sbjct: 61 DIRFVVTTSEAEALLLENNVIKTEKPRYNVRLKDSKSYPFILITEEDYPKLRITR-ESGK 119 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG F + + + + L G G+ C + +++C G C S Sbjct: 120 KGEYFGPFVDVGSLRSIVDELLKVFPL--RSCGDSKFREGKLCLKFQIRKCLGPCENMIS 177 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 + + Q E R + + H+ Q + L + EEA + Sbjct: 178 KNRYNQLVEQIREFFRGNV--------------DTVKSHMEQEMMRLSDDMNFEEAAIMR 223 Query: 259 RT 260 Sbjct: 224 DR 225 >UniRef50_C1FMJ8 UvrABC system protein C n=14 Tax=Clostridium RepID=UVRC_CLOBJ Length = 618 Score = 229 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 87/226 (38%), Gaps = 11/226 (4%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQS 77 L L +LP +PGVYL + +Y+GK+ +++RV + + AM++ Sbjct: 3 DLEYQLKNLPDKPGVYLMKNNLGEI-IYVGKAKILKNRVRQYFQKSQKHSEKVKAMVKNI 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDF 136 +I T EI AL+LE LIK+ +P +N L+ ++ +++ + V + Sbjct: 62 EEFEYIITDSEIEALILECNLIKKYRPKYNILLKDDKHYPFIKVTLAEDFPRVVSTRKVT 121 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 FG + + + ++ I + C + +E R C + C C Sbjct: 122 KDGSKYFGPYVDGSSVKDIIELIKKTFPIRTCKKNI-VEGAKAIRPCLNYQIGLCKAPCA 180 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALK-EQHPEMTQYHII 239 E+ + ++ L L E+ E ++ Sbjct: 181 QYIKKSEYREIIDDVIKLLSGKHLDIVENFKLNMEKAAENLEFEKA 226 >UniRef50_C5BV40 UvrABC system protein C n=16 Tax=Actinomycetales RepID=UVRC_BEUC1 Length = 693 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 55/270 (20%), Positives = 98/270 (36%), Gaps = 20/270 (7%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLR 75 P R ++P PGVY F + Y+GK+ ++RSR+ S+ + P M+ Sbjct: 4 PTTYRPRPGEIPDAPGVYRFRDPHGRVV-YVGKAKSLRSRLSSYFQDLSALHPRTQQMVT 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEV 134 + + W E+ AL LE IKE P FN + R ++ L + + V V Sbjct: 63 TASSVEWTVVGTEVEALQLEYSWIKEFDPRFNVKYRDDKSYPYLAVTMGEEVPRVQVMRG 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGA 192 + FG + + A + + + + C + + GR C + +C+ Sbjct: 123 AKRKGTRYFGPYGHAWAIRETVDLLLRVFPVRTCSSGVYKRAAASGRPCLLGYIDKCSAP 182 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEM-TQYHIIQNWLWLGAVNSL 251 C G+ S E+H + + V L+ EM + + + Sbjct: 183 CVGRISVEDHRDLAEDFCSFMAG-----ESGVFLRRLESEMAAASAELDFERAARVRDDI 237 Query: 252 EEATTLIRTPA-----GFDHDGYKILCKPL 276 ++ A G D D + + L Sbjct: 238 NALRRVVEKNAVVLADGTDADVFALAADEL 267 >UniRef50_C1A8T0 UvrABC system protein C n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=UVRC_GEMAT Length = 616 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 62/246 (25%), Positives = 97/246 (39%), Gaps = 21/246 (8%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSR 78 + L LP PGVYL+ + LY+GK+ +RSRV S+ +P AM+R+ R Sbjct: 3 VAQKLPHLPESPGVYLWKDVEGQV-LYVGKAKRLRSRVRSYWAQEHESSPKTRAMVRKVR 61 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS 137 + I E AL+LEA LIKE P FN LR ++ +++ + V Sbjct: 62 DLETIVVPSEAHALILEATLIKEYHPRFNIALRDDKSYPYIRVTVNEPFPRVMVTRRLLD 121 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG + + A +AL + + L + R C ++KRC C G + Sbjct: 122 DGARYFGPYTDVGAMRRALNVVKRIFTVRSCHYALPGEAPERPCLDYSIKRCKAPCVGYQ 181 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 S E++ + + + W G +H+ + L E A L Sbjct: 182 SREDYRAMIDEVV-------WFLDG-------RTSDVMHHVRERMLDASERLDFERAAEL 227 Query: 258 IRTPAG 263 A Sbjct: 228 RDALAH 233 >UniRef50_D1BHL1 Excinuclease ABC subunit C n=16 Tax=Actinomycetales RepID=D1BHL1_SANKS Length = 703 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 93/248 (37%), Gaps = 16/248 (6%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLR 75 P R ++PT PGVY F + + +Y+GK+ N+R+R+ S+ + P M+ Sbjct: 4 PATYRPAPGEIPTTPGVYRFRDDHGRV-IYVGKAKNLRARLSSYFQDLAALHPRTQTMVT 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEV 134 + + W E+ AL LE IKE P FN + R ++ L + + V Sbjct: 63 TASSVEWTVVGTEVEALALEYSWIKEYDPRFNVKYRDDKSYPYLAVTMGESVPRAQVMRG 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGA 192 FG FA+ A + L + + C + GR C + +CA Sbjct: 123 SKRVGTRYFGPFAHAWAIRETLDLLLRVFPIRTCSAGVYKRAQQSGRPCLLGYIDKCAAP 182 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C + S + H + + ++ EM+ QN + A + Sbjct: 183 CVERISKDAHRALADDFCAFMAGDTAKF-----MRRLRDEMSMAA--QNLDYERAARLRD 235 Query: 253 EATTLIRT 260 + L R Sbjct: 236 DIGALERA 243 >UniRef50_C7H041 Excinuclease ABC subunit C n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H041_9FIRM Length = 626 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 14/232 (6%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQSR 78 + + + LP PGVYL + + +Y+GK+ N++ RV S+ ++ A M+RQ Sbjct: 3 DIEANVKKLPEVPGVYLHKDSTGKV-IYVGKANNLKKRVQSYFSKTVKSRKVAYMVRQIT 61 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEVDFS 137 +I TA E AL+LE LIK+ P +N L ++ ++++E + + Sbjct: 62 EFEYIVTANEKEALILECNLIKKYMPRYNVLLTDDKTYPYIKISEDEEYPRITKTRRIEK 121 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG +++ AA + + + +L L P RAC + +C G C GK Sbjct: 122 DGAKYFGPYSDEFAANEIMDLLNKIYRLKKCKLQKFPDG-MRACLNYHIGQCDGMCIGKG 180 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVN 249 + E++ R+ ++ + L+ + + +M + L+ A Sbjct: 181 NREDYLDRIEKAKDFLQG-----RDKSLIHTLRKKMQEAS--DGMLYESAAM 225 >UniRef50_A0L8U4 Excinuclease ABC subunit C n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8U4_MAGSM Length = 617 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 93/235 (39%), Gaps = 13/235 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQ 76 + L+ + LP +PGVY F+ ++ + LY+GK+ +R RV S+ +P M++Q Sbjct: 13 QRLKRDVKQLPLKPGVYRFYDDAGQL-LYVGKAKALRKRVSSYFNHLAGHSPKTVVMVKQ 71 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKEVD 135 R+ + TA E AL+LEA LIK QP +N L+ N+ L L + D Sbjct: 72 IMRLEFTTTANENDALVLEANLIKAHQPRYNVLLKDNKSYPYLHLTTDHAYPRLALYRGD 131 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 FG + + A + L + + + R R C + + RC G CC Sbjct: 132 RKARGRFFGPYPSAHAVRETLNWLQKIFPV-RQCEDSQFNHRSRPCLQYQIHRCGGPCCD 190 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS 250 + + + Q L + M Q +++ + Sbjct: 191 RIDVTSYGAMVSQVTLFLEGK-----DKQLVNTLKEAMWQAAQARDFEGAARLRD 240 >UniRef50_B3WE47 UvrABC system protein C n=33 Tax=Bacilli RepID=UVRC_LACCB Length = 602 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 96/219 (43%), Gaps = 10/219 (4%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE---AAMLRQSRR 79 H+ L+ LP PG Y + + +Y+GK+ N+++RV S+ ++ + AAM+ Q Sbjct: 5 HIEHKLSLLPDLPGSYQMKDINGKI-IYVGKAKNLKNRVRSYFKSSHDGKVAAMVSQVAD 63 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRA 139 +I T+ + A LLE LI++ QP +N +L++ +++ +R + Sbjct: 64 FDFIVTSTDKEAFLLEITLIQKYQPYYNIKLKKGTGYPYIKITHERDPKIEITGTIRKDG 123 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 FG + N AA + + I L +GR C + +C GAC Sbjct: 124 GYYFGPYPNVYAAQETMHFIQKVYPLRRC-----NGYQGRPCLYYHMGQCLGACFRTVPE 178 Query: 200 EEHALRLRQSLERLRVVCWPWQGAVALK-EQHPEMTQYH 237 +E+ ++ + L + ++ K E+ + Q+ Sbjct: 179 KEYTDQIERIKRFLNGNVGKAKASLTAKMERAAKNLQFE 217 >UniRef50_B3EU62 Excinuclease ABC, C subunit n=2 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3EU62_AMOA5 Length = 596 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 101/268 (37%), Gaps = 24/268 (8%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQSRRISW 82 + LP +PGVY F+ + + +Y+GK+ +++ RV S+ M+ + IS+ Sbjct: 11 IGKLPNQPGVYFFYNKQQQI-IYVGKAKDLKKRVSSYFNKNQQDNLKTRRMVEEIAAISF 69 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNL 142 E ALLLE LIK QP +N L+ ++ + + +R V ++ Sbjct: 70 TIVNSEYEALLLENNLIKRFQPRYNILLKDDKSFPYICITRERFPKVITTRQPGAKLGQY 129 Query: 143 FGLFANRRAALQALQTIADEQ--KLCYGLLGLEPL--SRGRACFRSALKRCAGACCGKES 198 +G F + + Q L I + C L E + + + C + C G C G ++ Sbjct: 130 YGPFTDLKNMYQILDLIKSLYTLRTCNYNLLEENICKHKFKVCLEYHIGHCKGPCEGLQT 189 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 E + ++Q L+ + H + A + A Sbjct: 190 EEAYNQDIQQIEHFLKGNINAVKK--------------HFKEKMSQAAAAMDYKNAQAYK 235 Query: 259 RTPAGFDHDGYKILCKPLLSGNYEITEL 286 A ++ K L GN ++ + Sbjct: 236 EKIAALENYQSKSLVVNPQVGNLDVFAI 263 >UniRef50_B2FK26 UvrABC system protein C n=29 Tax=Proteobacteria RepID=UVRC_STRMK Length = 614 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 55/237 (23%), Positives = 91/237 (38%), Gaps = 20/237 (8%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRI 80 ++F L T PGVY + DT+ LY+GK+ +R+RV S+ +M+ Q R+ Sbjct: 12 KAFAAQLSTAPGVYRMYAADDTL-LYVGKARALRNRVGSYFNGSPKNARIMSMISQIVRM 70 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 T E ALLLE +LIK P +N LR ++ + L + + + Sbjct: 71 DVTVTRSEAEALLLENQLIKSLSPRYNVSLRDDKTYPHVLLTREDWPRIALHRGPRAIPG 130 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG + A + L + KL +R R C + + RC+ C + Sbjct: 131 RYFGPYPGVTAVRETLNLMHKLFKL-RSCEDSVFRNRSRPCLQYQIGRCSAPCVELVAPA 189 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 E+A +R++ L E + + + E+A L Sbjct: 190 EYAESVRRAALFL--------------EGKSDELTRELGEQMQAASEALEFEQAARL 232 >UniRef50_UPI0001C41B0D excinuclease ABC C subunit UvrC n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41B0D Length = 615 Score = 227 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 49/228 (21%), Positives = 103/228 (45%), Gaps = 21/228 (9%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISWIC 84 ++LP +PG+Y+ ++ + +Y+GKS ++R+RV S+ + +P ++ + +I Sbjct: 9 DELPQKPGIYIMKDINEEI-IYVGKSKSLRNRVKSYFQKNLDSPKTKVLMSHFNSLEYIV 67 Query: 85 TAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFG 144 T E AL+LEA LIK+ +P +N RL+ +++ +++ ++ + S+ +G Sbjct: 68 TNTEKEALILEANLIKKHRPRYNIRLKDDKRYPYVKITDEDFPKIVITRT-ISKTGTYYG 126 Query: 145 LFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 F + A Q ++ + ++ C + G C S + C C G+ S EE+ Sbjct: 127 PFTDVTAVRQTVKFLKQLFRIRTCKRMDG--------PCLNSQIDLCYAPCDGQISKEEY 178 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS 250 +++ + +K+ EM Q Q + + Sbjct: 179 KEHIKKIDLFFQGKYNK-----IIKDLEIEMKQAAERQEYEKAAVIRD 221 >UniRef50_D0WMS6 Excinuclease ABC subunit C n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WMS6_9ACTO Length = 734 Score = 227 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 93/245 (37%), Gaps = 14/245 (5%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLR 75 P R +PT+PGVY F + LY+GK+ N+R+R+ S+ + P AM+ Sbjct: 4 PRQYRPEQGAIPTQPGVYRFLDGEGRV-LYVGKAKNLRARLSSYFQDPAGLSDRIRAMVY 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + + W+ E+ AL LE IKE P FN R N+ L ++ + V+ Sbjct: 63 TAEAVKWVVVGSEVEALTLEYLWIKEFTPTFNVVFRDNKSYPYLAVSLGEEYPRVWVTRQ 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGA 192 + + G + A + L + + C + GR C + +C+ Sbjct: 123 EHRKGTRYLGPYTKVWAIRETLDQLLSVFPMRSCTKSQFNQARRLGRPCLFGHIGKCSAP 182 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C + + EEH + + G+ A+ + M + + + + Sbjct: 183 CIERVTPEEHRETAMSLIRFMEG-----GGSKAIATRRKRMLEAANAEEYETAARLRDEI 237 Query: 253 EATTL 257 A Sbjct: 238 SALEA 242 >UniRef50_Q4FPI1 UvrABC system protein C n=3 Tax=Candidatus Pelagibacter RepID=UVRC_PELUB Length = 611 Score = 227 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 8/220 (3%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLRQSRR 79 +R L +P PGVY D + LY+GK+ N+ +R+ S++ A ML Q+ + Sbjct: 11 IRKELPLIPKSPGVYRMLDHKD-VILYVGKAKNLPNRLKSYVAEKNHIIRTARMLSQTFK 69 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSR 138 + TA E ALLLEA LIK+ +P FN L+ ++ + + N+ + V + Sbjct: 70 LEITTTANESEALLLEANLIKKHKPKFNILLKDDKSFPFVFISNKDQWAQVTKHRGKKDK 129 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG FA+ A ++ + ++ +R R C +KRC+G C Sbjct: 130 EGFYFGPFASAGTANWTIKMLQKIFQI-RVCDDSTFKNRKRPCILYQIKRCSGPCVDYID 188 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAV-ALKEQHPEMTQYH 237 E++ + Q+++ + Q + E+ E + Sbjct: 189 KEDYKKSVDQAIQFVSGKSRDIQKNLSKQMEEASEKLDFE 228 >UniRef50_A1ZTX2 Excinuclease ABC, C subunit n=4 Tax=Bacteroidetes RepID=A1ZTX2_9SPHI Length = 601 Score = 227 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 110/264 (41%), Gaps = 16/264 (6%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQS 77 + + L LPT GVY F +++ + LY+GK+ N+++RV S+ +++Q Sbjct: 3 QIEATLKQLPTNAGVYKFFDKNN-VLLYVGKAKNLKNRVNSYFNKSAQHNRKTINLVKQI 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 + + E ALLLE LIK QP +N L+ ++ + + + + Sbjct: 62 AHVDYTVVNSEFDALLLENNLIKNYQPKYNILLKDDKTYPYILITNEPFPKLVVTRKLEK 121 Query: 138 RAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPL--SRGRACFRSALKRCAGAC 193 +G F N +A ++ I + + C L E + ++ + C L C C Sbjct: 122 NKGRFYGPFTNLKAMNAIVELIRELYTIRTCNLHLSKENIQQNKFKLCLEYHLGNCQAPC 181 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQ---HPEMTQYHIIQNWL-WLGAVN 249 G +S E++ L + ++ LKEQ + E ++ ++ L +++ Sbjct: 182 EGLQSEEDYLKDLEHAKHIMKGNIHIV--KTYLKEQMLAYAEKLEFEKAESQKQKLASLD 239 Query: 250 SLEEATTLIRTPAGFDHDGYKILC 273 + + ++ D D + I+ Sbjct: 240 KFQSKSLVVNPNKVIDTDVFSIIS 263 >UniRef50_Q2NGT2 UvrABC system protein C n=4 Tax=Methanobacteriaceae RepID=UVRC_METST Length = 598 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 103/238 (43%), Gaps = 20/238 (8%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT------PDEAAMLRQSRRISW 82 +++P +PGVY+ H + D + +Y+GK+ ++SR+ S+ R P ++R + Sbjct: 7 DEVPQKPGVYIMHNKEDEV-IYVGKAKKLKSRLQSYFRDEDKLDRPKTQFLMRHFSYFEY 65 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNL 142 I T E AL+LEA LIK+ +P +N L+ +Q +++ + +Y + + Sbjct: 66 ILTNTEKEALILEANLIKKYRPHYNISLKDGKQYPYIKITNEDFPRIYITRNIVNDKASY 125 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 +G + + A + + ++ C +K+C+ C S EE+ Sbjct: 126 YGPYTDSTHARAFIDFLNKNFQIRTCKHM------DGPCLNYQIKQCSAPCVNYISQEEY 179 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 +R+ L+ +K+ +M +Y +N + A ++ T+ T Sbjct: 180 NRNIRRVKLLLQGKY-----KTTIKKLKKDMNRYA--KNMEFEKAAMLRDQIDTIKIT 230 >UniRef50_C0GMH4 Excinuclease ABC, C subunit n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMH4_9DELT Length = 641 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 68/252 (26%), Positives = 110/252 (43%), Gaps = 19/252 (7%) Query: 30 DLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQSRRISWIC 84 D P PGVYL E + + +Y+GK+ N+RSRV S+ R+ P ML + ++ +I Sbjct: 45 DFPRDPGVYLMKDEQNRI-IYVGKAKNLRSRVSSYFRSSRDPSPKTRVMLGRVLQVDYIT 103 Query: 85 TAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKEVDFSRAPNLF 143 T E ALLLEA LIK+ +P +N LR ++Q +L++ R + F Sbjct: 104 TTSEKEALLLEASLIKKHRPRYNIVLRDDKQYVLFRLDKSRPYPALELTRSARRDGSVYF 163 Query: 144 GLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHA 203 G F + AA + ++ I L + +R R C + ++RC G CC S EE++ Sbjct: 164 GPFTSAAAARETMKVINRLFYLRKCGH-KKFRNRVRPCLQHFIRRCPGPCCLDVSTEEYS 222 Query: 204 LRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT--- 260 +R+ L + A +K +M + ++ + EA Sbjct: 223 REIRRLEMFLSG-----RSAELIKGMEKDMQEASRELDFEKAALLRDQIEAVKQTTKSQS 277 Query: 261 ---PAGFDHDGY 269 P D D + Sbjct: 278 VVFPGTGDMDVF 289 >UniRef50_A1WLD5 UvrABC system protein C n=17 Tax=Burkholderiales RepID=UVRC_VEREI Length = 685 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 57/286 (19%), Positives = 104/286 (36%), Gaps = 28/286 (9%) Query: 20 YPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLR 75 + E L + + LP PGVY + + LY+GK+ +++ RV S+ M+ Sbjct: 2 HSEELLAQVAALPALPGVYRYFDSQG-LLLYVGKARHLKRRVASYFTKNHGGTRIGHMVC 60 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN------------E 123 + R+ E ALLLE LIK Q P FN R ++ L++ Sbjct: 61 KIARLETTVVRSEAEALLLENNLIKTQNPRFNILFRDDKSYPYLKITGAPASSAGRDAPG 120 Query: 124 KRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFR 183 +R + + FG + + A ++++ + +L +R R C Sbjct: 121 QRFPRIAYYRGAVDKQHRYFGPYPSAWAVKESIELLQKVFRLRTCE-DTVFANRTRPCLL 179 Query: 184 SALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQ----HPEMTQYHII 239 +KRC+G C + E +A+ ++ + L A+ + Q + Sbjct: 180 YQIKRCSGPCVNLIAPEAYAVDVQHAQALLSGQTQELLQAMEARMMAYSGQLAFEQAAEV 239 Query: 240 QNWLWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITE 285 +N + +L + D D IL + G + Sbjct: 240 RNQM-----QALSRVLHQQSIESAHDKDV-DILAVRVQGGRACVNL 279 >UniRef50_B7K124 Excinuclease ABC, C subunit n=5 Tax=Cyanobacteria RepID=B7K124_CYAP8 Length = 617 Score = 226 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 19/249 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQ 76 + L + L +LP+ PGVYL + + LYIGKS +RSRV S+ R +P M++Q Sbjct: 12 DDLETRLKELPSEPGVYLMRNQGGEI-LYIGKSKKLRSRVRSYFRPSQPHSPRIGLMVQQ 70 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL----NEKRVDVVYAK 132 I +I T E AL LEA LIK+ QP FN L+ +++ + + R+ + + Sbjct: 71 VADIEFIVTDTEAEALALEANLIKQHQPYFNVLLKDDKKYPYVCITWSQTYPRIFITRKR 130 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGA 192 ++ R +G + + Q LQ + L +PL + R C + +C G Sbjct: 131 RLNNERD-RYYGPYVDTHLLRQTLQLVKRVFPLRQRP---KPLFKDRPCLNYDIGKCPGV 186 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C G S E++ + + + L++ H +M + + + Sbjct: 187 CQGLISPEDYHKIVEKVAMIFQGRT-----GELLEKLHQQMEKAATELRFEQAAMIRDQL 241 Query: 253 EATTLIRTP 261 +A + Sbjct: 242 KALNALTVD 250 >UniRef50_B5EPN1 Excinuclease ABC, C subunit n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EPN1_ACIF5 Length = 623 Score = 226 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 63/272 (23%), Positives = 104/272 (38%), Gaps = 21/272 (7%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQSRRIS 81 FL L ++PG+Y G+ + LY+GK+ N+R RV S+ TP AML Q R+ Sbjct: 24 EFLRTLTSQPGIYQMFGQ-GSRLLYVGKARNLRRRVSSYFQKQRHTPKTLAMLAQVTRVE 82 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKEVDFSRAP 140 + T E AL+LEA LIK P +N LR ++ L + + Sbjct: 83 VVVTHTETEALVLEANLIKRHHPPYNILLRDDKSYPYLFIETGHGTPRMSLHRGAQKGKG 142 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 + FG + A +++ + +L R RAC + ++RC+G C G S E Sbjct: 143 HYFGPYPAVTALRESMVLLQKAFRLRTCE-DHTFHHRSRACLQFQIRRCSGPCVGHISGE 201 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 ++A + ++ L E + + + EEA Sbjct: 202 DYARDVADTIRFL--------------EGKSDEAIRSLGERMQAAAEQLDFEEAARRRDQ 247 Query: 261 PAGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 A + G++++ N Q Sbjct: 248 IAALSKIQERQYVAQAGGGDFDVLAAAQENGQ 279 >UniRef50_B8FHR2 UvrABC system protein C n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=UVRC_DESAA Length = 603 Score = 225 bits (575), Expect = 9e-58, Method: Composition-based stats. Identities = 48/228 (21%), Positives = 90/228 (39%), Gaps = 9/228 (3%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQS 77 + L L PGVYL ES + +Y+GK+ +++ RV S+ R ++++ Sbjct: 3 EIEKKLATLSNGPGVYLMKDESGEI-IYVGKARSLKKRVSSYFLEKPNRDLKTGILVKKI 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDF 136 I E AL+LEA LI++ +P +N L+ ++ +L+++ + Sbjct: 62 ASFDAILVTTEKEALILEANLIRKHKPRYNILLKDGKRFPSLRIDVRTSYPRLEVVRKVK 121 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 FG F++ L+ I +L EP R R C + +C G CC Sbjct: 122 KDGAIYFGPFSSAGKLRSTLKIINKTFQL-RKCKQKEPPKRNRPCLNYQMGQCLGPCCLP 180 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKE-QHPEMTQYHIIQNWL 243 +E+ + + + L+ + + E +Y + Sbjct: 181 VDRDEYLDMVNEVILFLKGRTNDLLQKIKEQMAAASERQEYELAARLR 228 >UniRef50_C5CDH0 Excinuclease ABC, C subunit n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CDH0_KOSOT Length = 574 Score = 225 bits (575), Expect = 9e-58, Method: Composition-based stats. Identities = 58/271 (21%), Positives = 106/271 (39%), Gaps = 23/271 (8%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP------DEAAMLRQS 77 L + + +LP +PG+YLF + + +YIGK+ +R RV S+ R + ++ Sbjct: 5 LLAKVRELPEKPGIYLFKNKKGEI-IYIGKAKKLRKRVSSYFRASTHEQNGKTRELYQEI 63 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 + +I E ALLLEA LI + +P FN L+ +++ + +++ + + Sbjct: 64 DDLEFIVVPTEKEALLLEANLIYQHKPKFNVLLKDSKRYPYIFISDDEFPYISITRIR-D 122 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 R +G + + L + KL + +GR CF LK C+ G+ Sbjct: 123 RKGFYYGPYTSITLVRNLLDLLQRIFKL-RSCMDNRDCKKGRPCFLYHLKMCSAPLAGEI 181 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 SH E+ ++R ++ L + + ++ L E+A + Sbjct: 182 SHAEYQKQVRGFMDFLDGKTLDVR--------------RQLERSMQRLAENLQFEKAKEI 227 Query: 258 IRTPAGFDHDGYKILCKPLLSGNYEITELDP 288 FD K S + LD Sbjct: 228 RDVLVSFDRLYSKQAVDVSESYTADFIVLDS 258 >UniRef50_C6X0K5 Excinuclease ABC subunit C n=9 Tax=Bacteroidetes RepID=C6X0K5_FLAB3 Length = 611 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 20/247 (8%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLRQSR 78 +L L LP+ PGVY ++ ++D + LY+GK+ +++ RVLS+ M+ + Sbjct: 17 NLELQLKTLPSEPGVYRYYDKNDQL-LYVGKAKHLKKRVLSYFNKNLPGYRTRIMVAKIH 75 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 R+ E ALLLE LIKE QP +N L+ ++ + + + ++ Sbjct: 76 RLETTIVPSEYDALLLENNLIKEHQPFYNVMLKDDKSYPWICIKNEDFPRIFLTRTMIKD 135 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS----RGRACFRSALKRCAGACC 194 +G +A R A L TI KL L L P + + C +K C G C Sbjct: 136 GSEYYGPYARVRPAKVLLDTIKHIYKLRTCTLNLSPPKIAEGKYKVCLEFHIKNCQGPCE 195 Query: 195 GKESHEEHALRL-----------RQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWL 243 ES E++ L++ +++ E L + + ++ H + +++N+ Sbjct: 196 MLESKEDYDLKIDAIRGIIKGDFKRAKEYLVNQMMKYAENLQFEDAHVVKERLDMLENYQ 255 Query: 244 WLGAVNS 250 V + Sbjct: 256 HKHTVVN 262 >UniRef50_D1R706 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R706_9CHLA Length = 614 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 17/241 (7%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQSRRISW 82 L+ P PGVYL + M LY+GK+ N+R+R+ + T + ++ Q I Sbjct: 8 LSLYPNHPGVYLMKNRTG-MILYVGKAKNLRTRIRQYFMTSGDGREMIPFLVPQIESIET 66 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYA---KEVDFSRA 139 I E ALLLE+ LIK+ +P +N L+ ++ AL++N K + + Sbjct: 67 ISVTSEKEALLLESHLIKKHKPKYNALLKDDKSYVALKINVKNPWPMLSLERYRGKPKAD 126 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 FG + + AA + L + L E R R C +KRC C K + Sbjct: 127 GVYFGPYTHAGAARRTLDLLHRLFPL-RQCSDAEFARRTRPCILYDMKRCIAPCVQKCTK 185 Query: 200 EEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIR 259 EE+ +++ ++++ LR Q L+E + EM Y +N + A SL+ + + Sbjct: 186 EEYQIQVDRTIKFLRG-----QNKEILQEMYQEMETYA--ENLEFEKAGKSLDTIRYIEK 238 Query: 260 T 260 T Sbjct: 239 T 239 >UniRef50_A0AGX5 Complete genome n=3 Tax=Listeria RepID=A0AGX5_LISW6 Length = 366 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 10/224 (4%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQSRRI 80 L++ L LP PG Y++ E++ + LYIGKS +++RV S+ + A ++RQ R + Sbjct: 5 LQTKLTLLPESPGCYIYKDENNEI-LYIGKSKCLKNRVKSYFHSKQIGKTARLVRQIRDL 63 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 I T E ALLLE LI++ QP FN +L+ +++ ++ + Sbjct: 64 ELIITTSEKEALLLEMILIQKYQPPFNIQLKEGTSYPYIKITNEKNPHIEVVFEAKQDGA 123 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 + FG + R +A Q + I LC GR C L C G C + Sbjct: 124 HYFGPYPGRYSARQTVDLIQKLFPLCRC-----DGKPGRPCLYYHLGLCLGPCLREIDPA 178 Query: 201 EHALRLRQSLERLRVVCWPWQGAV-ALKEQHPEMTQYHIIQNWL 243 + ++ + L P + + A+ ++ + ++ Sbjct: 179 VYKAQIHKISRFLEGDVKPVKKKIQAIMQEATDKLEFERAAEQR 222 >UniRef50_C4FUE0 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUE0_9FIRM Length = 604 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 10/234 (4%) Query: 14 AAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DE 70 A + E + + L LP PG YL +D + LY+GK+ N+++RV S+ R Sbjct: 9 AQERAKVQERIEAKLKLLPDLPGCYLMKDAADQI-LYVGKAKNLKNRVRSYFRGAHDTKT 67 Query: 71 AAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVY 130 ++ + I T ALLLE LI++ +P FN RL+ L++ ++R + Sbjct: 68 TKLVSEIDHFEIIITNSNKEALLLEINLIQQYKPPFNIRLKEGTMYPYLKITKERHPQLI 127 Query: 131 AKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCA 190 FG F N AA Q Q + L + RACF L +C Sbjct: 128 ITSNVTKDGGLYFGPFPNVGAATQTQQLLHRVYPLRRCG-----KNEKRACFYYHLGQCI 182 Query: 191 GACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQ-HPEMTQYHIIQNWL 243 G C + + + + ++++ + P + K Q E + ++ Sbjct: 183 GPCDHEVTKDMYEQQIQKIKQFFNGDIQPIMTQLKDKMQAAAERLDFEQAADYR 236 >UniRef50_D2RB48 Excinuclease ABC, C subunit n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RB48_GARVA Length = 780 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 108/266 (40%), Gaps = 15/266 (5%) Query: 13 EAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----- 67 A + + + R D+P +PGVY + + +Y+GK+ N+R+R+ ++ + Sbjct: 54 GAPLLGDTRDLFRPASRDIPAQPGVYKWRDGEGRV-IYVGKAKNLRNRLANYFQPLYQLH 112 Query: 68 PDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRV 126 P +M+ +R + W + E AL LE IK P FN R ++ + ++ E+ Sbjct: 113 PRTQSMVLTARSLEWTVVSTEFEALTLEYTWIKAFNPRFNVVFRDDKTYPYVAVSLEETF 172 Query: 127 DVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRS 184 V+ +R FG +A +L ++ + C + + GR C + Sbjct: 173 PRVWITRNRSARHARYFGPYAKVWPLRHSLDSLLKTFPIRTCSSSVFSKAHRTGRPCLFA 232 Query: 185 ALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQ-YHIIQNWL 243 ++ +C+ C G EH + + L G + + EM + ++ Sbjct: 233 SIGKCSAPCIGNIDPSEHRKMVEHVVGILTGSV----GESYISQIKNEMKEASEELEFER 288 Query: 244 WLGAVNSLEEATTLIRTPA-GFDHDG 268 + + T+++ A FD+D Sbjct: 289 AAKLRDEIAVLNTILQQNAVVFDNDV 314 >UniRef50_B4RF25 UvrC, excinuclease ABC, C subunit n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RF25_PHEZH Length = 662 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 58/250 (23%), Positives = 100/250 (40%), Gaps = 12/250 (4%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSH----LRTPDEAAMLRQSRR 79 ++ + LP RPGVY GE + LY+GK+ +++ RVL + T A M+ +R Sbjct: 57 IKDEVRRLPDRPGVYRMIGEDGEV-LYVGKARSLKKRVLQYAQGRFHTQRIAHMVDLTRA 115 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKEVDFSR 138 + ++ T E ALLLE LIK+ +P FN LR ++ + + + S Sbjct: 116 MEFVTTRTETDALLLEINLIKQLKPRFNVLLRDDKSFPEIVIRRDHAAPQLRKHRGAHSI 175 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 + FG FA+ A + L T+ L +R R C ++RC+ C G S Sbjct: 176 KGDYFGPFASAWAVNRTLNTLQKAF-LLRSCSDSVYETRTRPCMLHQIRRCSAPCTGLIS 234 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 E++ + ++ LR ++ EM + + A + Sbjct: 235 LEDYNALVDEAGAFLRGK-----SRAVMERMAGEMQAAAEDLEFERAARLRDRIRALASV 289 Query: 259 RTPAGFDHDG 268 + + Sbjct: 290 AQEQQINPET 299 >UniRef50_C5NYN4 Excinuclease ABC subunit C n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYN4_9BACL Length = 582 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 99/242 (40%), Gaps = 15/242 (6%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAAMLRQSRR 79 L+ L LP PG YL+ + +Y+GK+ N+++RV S+ ++ + Sbjct: 4 TLQKKLELLPDNPGCYLYKDNIGEI-IYVGKAKNLKNRVKSYFTGTHNKKTQTLVSKIED 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSR 138 + +I E ALLLE LIK+ +P FN RL+ ++ L + E+ ++ ++ + Sbjct: 63 LEYIIVNSEKEALLLENNLIKKYRPYFNIRLKDDKSYPYLMITKEEHPRLLMTRKYKKNN 122 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG + + ++A + + + L R C + C G C K + Sbjct: 123 KNIYFGPYVDIKSATEVKKILDKIYPLRKC-----NPVEKRPCMYYQIGECIGPCAKKIT 177 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 +++ ++ + L L + ++ ++ + G +++ ++ + Sbjct: 178 ADDYKSQISKIKSFLTGNT-----KEILTDLQSKLQEHIKNLEFEAAGQIHNYIKSIEVS 232 Query: 259 RT 260 Sbjct: 233 VQ 234 >UniRef50_Q313T1 UvrABC system protein C n=2 Tax=Desulfovibrio desulfuricans subsp. desulfuricans RepID=UVRC_DESDG Length = 700 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 64/248 (25%), Positives = 99/248 (39%), Gaps = 15/248 (6%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRRISWICT 85 +PT PGVYL+ + + Y+GK+ ++R RV S+ R TP AMLR + + + T Sbjct: 9 IPTTPGVYLYKDPAGKVV-YVGKAKHLRRRVASYFRDIQRHTPKTRAMLRSAATVETLST 67 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK-RVDVVYAKEVDFSRAPNLFG 144 E ALLLEA LIK+ +P +N LR ++Q QL K + FG Sbjct: 68 TTEKEALLLEASLIKKHRPRYNILLRDDKQYVLFQLTRKHHWPRLVLTRKVRKDGSAYFG 127 Query: 145 LFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHAL 204 F + +AA Q + I L +R R C + +C G C + + Sbjct: 128 PFTSGQAARQTWKVIHKVFPL-RRCSDKAFRNRVRPCLYHFMNQCPGPCVLDVDRDGYMQ 186 Query: 205 RLRQSLERLRVVCWPWQGAVALKEQHP----EMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 +R+ L + Q E + ++++ L +A L Sbjct: 187 MVRKVEMLLAGRSTELIDMLRADMQAASDALEFEEAALLRDQLQAVERTVERQAAVL--- 243 Query: 261 PAGFDHDG 268 P D D Sbjct: 244 PGVHDMDA 251 >UniRef50_A8ZVJ2 Excinuclease ABC, C subunit n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZVJ2_DESOH Length = 626 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 100/235 (42%), Gaps = 13/235 (5%) Query: 18 YEYPE-HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEA 71 +E PE L L P RPGVYL + + +Y+GK+ N++ R+ S+ Sbjct: 11 HELPEDRLAEKLAGAPARPGVYLMKDGAGAI-IYVGKAFNLKKRLASYFVKKERLDLKTG 69 Query: 72 AMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVY 130 ++ + I TA E AL+LEA LI+ +P +N L+ +++ +L+++ + + Sbjct: 70 LLMERVVDFDTIVTATENEALILEASLIRRHKPRYNVLLKDDKRYPSLRIDPRQPYPALE 129 Query: 131 AKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCA 190 FG F++ RA + L+ + +L G R R C + C Sbjct: 130 IVRKTRPDGAVYFGPFSSARAVRETLKVVDKTFRL-RKCRGKVFKKRSRPCINFQMGLCL 188 Query: 191 GACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQ----HPEMTQYHIIQN 241 G C ++A +R+ L+ + ++ + + E + ++++ Sbjct: 189 GPCFYDVPENDYAEAVREVSLFLKGRATELVSDLRVRMKGAAENQEFEKAALLRD 243 >UniRef50_A5UY12 Excinuclease ABC subunit C n=5 Tax=Chloroflexaceae RepID=A5UY12_ROSS1 Length = 669 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 93/253 (36%), Gaps = 19/253 (7%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLR 75 P L +P PGVYL+ + +Y+GKS +R R+ S+ A ++ Sbjct: 12 PTAFEERLRAVPLAPGVYLWKNAQGKI-IYVGKSKRLRDRMRSYFNQTGDPYGKTARLVE 70 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN--EKRVDVVYAKE 133 Q I T+ E+ ALLLE LIK+ +P FN L+ ++ +++ E + + Sbjct: 71 QIADFQVIVTSTELEALLLEMTLIKQHRPRFNVLLKDDKSYPYIKVTLHETWPRIFATRN 130 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKL-----CYGLLGLEPLSRGRACFRSALKR 188 + FG +++ A + L + C G+ C +KR Sbjct: 131 PRWEEGARYFGPYSSAGAVYRTLDQLNRLFAFRPPSRCPDDKFNRHRRMGKPCLYYDIKR 190 Query: 189 CAGACC-GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGA 247 C G C G + EE+ + L + +K +M + ++ Sbjct: 191 CLGPCVPGLVNQEEYRATIESVCRFLEGK-----SDLVVKTLRRQMEEAAERLDFERAAR 245 Query: 248 VNSLEEATTLIRT 260 + LI Sbjct: 246 LRDSIRDIELISQ 258 >UniRef50_UPI000050F72E excinuclease ABC subunit C n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F72E Length = 619 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 56/247 (22%), Positives = 89/247 (36%), Gaps = 16/247 (6%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLR 75 P R +PT GVY F D +Y+GK+ N+R+R+ S+ P + M+ Sbjct: 4 PASYRPATGSIPTSAGVYKFRDP-DRRVIYVGKAKNLRNRLNSYFSNPAQLHPRTSTMVH 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + + W E+ AL LE I E P FN R ++ L + V + Sbjct: 63 TAASVEWTVVDTEVEALQLEWTWINEFNPRFNVMFRDDKSYPYLAITMNDEVPRAFITRG 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGA 192 + FG FA A L + + C + GR C + +CA Sbjct: 123 KRRKGVKYFGPFAQVWAIKDTLDLLLRAFPMRTCTAGVYRRAERSGRPCLLGYIDKCAAP 182 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C G+ S E H R + + + + + EM + + A + Sbjct: 183 CVGQISVEGHKDLARSISDFMSGNTGRF-----ISYRQKEMASAA--EELDYERAARLRD 235 Query: 253 EATTLIR 259 E T L + Sbjct: 236 EITALQK 242 >UniRef50_B8DRE6 Excinuclease ABC, C subunit n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DRE6_DESVM Length = 762 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 63/260 (24%), Positives = 103/260 (39%), Gaps = 14/260 (5%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----------TPDEAAML 74 + ++++P PGVYL+ + + LY+GK+ ++R R+ S+ R TP AML Sbjct: 3 KPVMSNIPDTPGVYLYKDAAGRI-LYVGKAKHLRKRIASYFREAAEGAPPPQTPKTLAML 61 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKE 133 RQ+ R+ + T E ALLLEA LIK+ +P +N LR ++Q +L +K + Sbjct: 62 RQAERLDTLSTTTEKEALLLEASLIKKHRPRYNIVLRDDKQYVLFRLQKKHPYPRLDIVR 121 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 +G F + AA + I L +R R C + +C C Sbjct: 122 AVRRDGAQYYGPFTSAGAARATWKAIHRAFPL-RRCTDRALENRVRPCLYHFIGQCLAPC 180 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALK-EQHPEMTQYHIIQNWLWLGAVNSLE 252 EE+A +++ L G + + E E ++ Sbjct: 181 VFDVPREEYAALVQRVEMLLSGRSGELVGQLRTEMETASEALEFERAAALRDQIRAVERT 240 Query: 253 EATTLIRTPAGFDHDGYKIL 272 P G D D I+ Sbjct: 241 VERQAAVLPGGGDLDVVGIV 260 >UniRef50_C9RQJ8 Excinuclease ABC, C subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQJ8_FIBSS Length = 623 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 97/257 (37%), Gaps = 15/257 (5%) Query: 19 EYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA------ 72 EH+ L +LP PGVY+ + +YIGK+ +++RV S+ D A Sbjct: 3 PVSEHIERRLAELPLLPGVYIMKNAQGKI-IYIGKAKVLKNRVSSYFDGSDHAGHRAATL 61 Query: 73 MLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYA 131 ML R I WI T E AL+LEA LI++ P +N L+ ++ L + + ++ Sbjct: 62 MLPYIRDIEWIITESETEALILEANLIRKHTPKYNVLLKDDKHFPYLAFSVNEPFPRLFL 121 Query: 132 KEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAG 191 +G + + R Q A ++ L L R C + RC Sbjct: 122 SRSVKKDGCLYYGPYMSSRMIRQLQDIAARLFQIRECKLKLPLNRPVRPCLNYHIGRCGA 181 Query: 192 ACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSL 251 C G + EE+ ++ Q+ L + EM + + + A Sbjct: 182 PCAGLVTREEYQKKVAQTQMLLGGKRDDL-----IDLWEREMLEAS--ERMDFETAAKKR 234 Query: 252 EEATTLIRTPAGFDHDG 268 + L T A D Sbjct: 235 DAIQALKATSAHQKTDV 251 >UniRef50_Q01S04 UvrABC system protein C n=2 Tax=Acidobacteria RepID=UVRC_SOLUE Length = 623 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 104/266 (39%), Gaps = 15/266 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPD-----EAAMLRQ 76 LR + LP PGVYL+ + +Y+GK+ ++R+RV S+ ++ + Sbjct: 1 MELRDKVGQLPFSPGVYLYKDSGGKV-IYVGKAKSLRNRVRSYFSEDKLGDIKTGTLITE 59 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 + I +I E AL LE LIK+ +P FN LR ++ +++ ++ VY Sbjct: 60 ACDIDYILVDNEKEALALENNLIKQYKPRFNILLRDDKTYPYVKVTNEKYPRVYVTRRLR 119 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC-G 195 FG F A + + I ++ + L + C + + RC G C G Sbjct: 120 KDGAQYFGPFFPANLAHRLVHFIHRHFQVPSCKVDLTRFH-PKPCLQFHIHRCLGPCVQG 178 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQ----HPEMTQYHIIQNWLWLGAVNSL 251 + E +A +R L + + + + +++ + V + Sbjct: 179 LTTDEAYAAAVRDVRLFLDGRHSDLARGLRARMEAASLEMRFEEAAGLRDLIT--TVEEI 236 Query: 252 EEATTLIRTPAGFDHDGYKILCKPLL 277 EE + D D + + +P L Sbjct: 237 EERQKMAAAKGD-DVDIFAVYAEPPL 261 >UniRef50_A9WT69 UvrABC system protein C n=2 Tax=Actinobacteria (class) RepID=UVRC_RENSM Length = 655 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 53/212 (25%), Positives = 84/212 (39%), Gaps = 10/212 (4%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLR 75 P R ++PT PGVY F E + +Y+GK+ N+RSR+ S+ P AM+ Sbjct: 4 PASYRPKTGEIPTDPGVYRFRDEHGRV-IYVGKAKNLRSRLTSYFANPVTLLPKTFAMVH 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEV 134 + + W E+ AL LE IKE P +N R ++ L + + V Sbjct: 63 TATSVQWTIVGSELEALQLEYTWIKEFAPRYNLAFRDDKSYPYLAVTMGEEFPRVQVMRG 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGA 192 + + FG F A + + T+ + C GR C + +CA Sbjct: 123 ERRKGTRYFGPFT-AGAIRETVDTLLRVFPVRTCSPSTFKRAQQSGRPCLLGYIDKCAVP 181 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAV 224 C G+ S EEH + + + G + Sbjct: 182 CVGRVSAEEHRTLADEFCAFMGGEAKRFIGTL 213 >UniRef50_Q1Q607 Similar to uvrABC system protein C (UvrC exinuclease) n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q607_9BACT Length = 610 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 97/240 (40%), Gaps = 15/240 (6%) Query: 27 FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPD-----EAAMLRQSRRIS 81 L ++P PGVYL + +Y+GK+ N+++RV S+ + +++ I Sbjct: 6 KLKNVPVSPGVYLMKDAKHKV-IYVGKAKNLKNRVRSYFQKGTGDRLYTEYLIKHVVDID 64 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSRAP 140 ++ T E AL+LE IK+ +P FN LR ++ ++L K Sbjct: 65 FVLTETEKEALILENNFIKQFKPKFNINLRDDKNFLCIKLETNKDFPYPKVVRQKEDDGA 124 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG +A+ RA + L+ I D + SR + C + +C G CCG Sbjct: 125 MYFGPYASARAVRETLRYINDTIPV-RKCRDNAFKSRTKPCLYYQIHKCLGPCCGLIDRA 183 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 + + Q + L+ + K+ + E Q + A ++ ++ +T Sbjct: 184 GYKTLIDQVILLLKGKQEDLIS-ILRKQMYEESKQL------RYEKAAKLRDQIQSIEQT 236 >UniRef50_Q47Z18 UvrABC system protein C n=274 Tax=Gammaproteobacteria RepID=UVRC_COLP3 Length = 639 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 86/224 (38%), Gaps = 7/224 (3%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLRQSRRI 80 +FL + + GVY + + +Y+GK+ ++ R+ S+ R +++Q I Sbjct: 23 EAFLRVVTEQAGVYRMYDSK-QVVIYVGKAKQLKKRLASYFRKDVGSVKTQVLVKQIAAI 81 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 T E AL+LE IK+ QP +N LR ++ L + + + Sbjct: 82 EVTVTHTEGEALILENNYIKKYQPKYNILLRDDKSYPYLLITAHKHPKLGLHRGGKKVKG 141 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG F A ++L+ + + +R R C + L RC+ C K S + Sbjct: 142 EYFGPFPTVGAVWESLRLMQKIFPI-RQCEDSYYRARSRPCLQHQLGRCSAPCVDKISVD 200 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALK-EQHPEMTQYHIIQNWL 243 ++ ++ + L+ + + E + + + Sbjct: 201 DYKEQVNLAKLFLQGKSSAVIEQLVARMELASNELHFELAAKYR 244 >UniRef50_Q3IYX6 UvrABC system protein C n=23 Tax=Alphaproteobacteria RepID=UVRC_RHOS4 Length = 623 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 102/256 (39%), Gaps = 24/256 (9%) Query: 10 LEFEAAAIYEYP---EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR 66 ++ + P ++ +L L PGVY + LY+GK+ N+R+RV ++ R Sbjct: 1 MQDNETDGRDVPTGHAVIQGYLKTLDGSPGVYRMLDAQSQV-LYVGKARNLRARVSNYAR 59 Query: 67 ----TPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL- 121 + A M+R++ + ++ T E ALLLE LIK+ +P +N LR ++ + + Sbjct: 60 PSGHSGRIARMIRETASMMFLTTRTETEALLLEQNLIKQLKPRYNVLLRDDKSFPNILIA 119 Query: 122 NEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRAC 181 + ++ S + FG FA+ A + L + L SR R C Sbjct: 120 KDHPFPMLKKHRGKKSEKGSYFGPFASAGAVNRTLNQLQRVF-LLRTCSDATFESRTRPC 178 Query: 182 FRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQN 241 +KRC+ C G+ E++A + + L+ Q ++ + Sbjct: 179 LLFQIKRCSAPCVGRVPAEDYAELIGDAERFLQGRTT--------------KVQANLAEQ 224 Query: 242 WLWLGAVNSLEEATTL 257 E A L Sbjct: 225 MQAASEAMEFERAAAL 240 >UniRef50_Q1MQH2 UvrABC system protein C n=3 Tax=Desulfovibrionaceae RepID=UVRC_LAWIP Length = 621 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 22/273 (8%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRR 79 R + +PT PGVYL+ + +Y+GK+ N+R RVLS+ R TP AM+ + Sbjct: 3 RPHPSSIPTTPGVYLYKDSQGRI-IYVGKARNLRKRVLSYFRDGLVITPKTKAMMNHANL 61 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK-RVDVVYAKEVDFSR 138 + I T E ALLLEA LIK+ +P +N LR ++Q ++ + + + Sbjct: 62 LETISTNTEKEALLLEASLIKKHRPRYNIVLRDDKQYLLFRIQKGIPFPRLEIVRQSYKD 121 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG F + + + I L +R R C L++C C + Sbjct: 122 NAVYFGPFTSGTSVRDTWKFIHKIFPL-RRCSDKVFNNRIRPCLYFYLQQCLAPCTEEVD 180 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 +++A+ +++ L L E + ++ L+ E+A TL Sbjct: 181 PKDYAVLIQKVELFLSGKS------KELVEL--------LQKDMLYASEALEFEKAATLR 226 Query: 259 RTPAGFDHDGYKILCKPLLSGNYEITELDPAND 291 H + G+ ++ + N+ Sbjct: 227 DQIQAIKHTIERQSVVLPEGGDMDVIGIAVVNN 259 >UniRef50_B3DRV5 UvrABC system protein C n=18 Tax=Bifidobacterium RepID=UVRC_BIFLD Length = 746 Score = 224 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 106/262 (40%), Gaps = 15/262 (5%) Query: 17 IYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEA 71 + + + R +D+P +PGVY + + +Y+GK+ N+R+R+ ++ + P Sbjct: 2 LGDSRDLFRPKTSDIPAKPGVYKWRDGEGRV-IYVGKAKNLRNRLTNYFQPLYLLHPRTQ 60 Query: 72 AMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVY 130 M+ +R + W A E+ +L LE IKE P FN + R ++ L + +R+ V+ Sbjct: 61 TMVLTARSLEWTVVATELESLTLEYTWIKEFDPRFNVQFRDDKTYPYLAVSTGERIPRVW 120 Query: 131 AKEVDFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKR 188 R FG +A +L + + C + + GR C +++ + Sbjct: 121 VTRSRKRRDTRYFGPYAKVWELRHSLDRLLRTFPVRTCTTNVFHKAQLTGRPCLFASIGK 180 Query: 189 CAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAV 248 C+ C + +EH R+ E+L V G + + +M + + + Sbjct: 181 CSAPCVNRIEADEH----RRLCEQLVGVMTGRLGRPYIAQLTRDMKEASAELEFEKAARL 236 Query: 249 NSLEEATTLIRTPAG--FDHDG 268 + + FD D Sbjct: 237 RDQIQMLETVVQQNAVVFDQDV 258 >UniRef50_C7LYI3 Excinuclease ABC, C subunit n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYI3_ACIFD Length = 620 Score = 224 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 93/241 (38%), Gaps = 23/241 (9%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRR 79 R L +P PG Y F D + +Y+GK+ N+R+RV S+ + +P AML + R Sbjct: 4 RPDLAAIPEAPGSYQFRDGEDRV-IYVGKARNLRARVGSYFQDPRQLSPKTRAMLAVASR 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSR 138 ++WI E ALLLE LIKE P +N RLR ++ + + +R R Sbjct: 63 LTWIVVPSEQDALLLEYSLIKEHHPRYNIRLRDDKSYPMIAVTVGERWPRAMIYRGKRRR 122 Query: 139 APNLFGLFANRRAALQALQTIAD--EQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 FG +A+ AA + L+ + + C + GR C + RC G C G Sbjct: 123 GARYFGPYADAGAAREVLELLRRALPLRTCSPAKLAQHERAGRPCLYFDIGRCVGPCIGA 182 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 + + + L E + + EEA Sbjct: 183 VDEATYRGLVDEVTGFL--------------EGRAGSLVDALETEMHAAASRLEFEEAAR 228 Query: 257 L 257 L Sbjct: 229 L 229 >UniRef50_Q04EZ7 UvrABC system protein C n=42 Tax=Lactobacillales RepID=UVRC_OENOB Length = 607 Score = 224 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 50/226 (22%), Positives = 93/226 (41%), Gaps = 10/226 (4%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQSR 78 E + L LP++PG Y ++ + +Y+GK+ N+++RV S+ + A ++ Sbjct: 4 ELIEQKLALLPSQPGSYQMKDKNGKI-IYVGKAKNLKNRVRSYFKAEHTGKTAELVANIH 62 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 +I T + A LLE LIK +P FN RL+ + +++ +R + Sbjct: 63 DFEFIVTNSDKEAFLLENTLIKRYRPYFNIRLKFSGSYPYIEITNERDPRLILANTLKHD 122 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG + N AA + L + L +GR C ++ +C GAC Sbjct: 123 HGTYFGPYPNVYAASETLHFLEMTYPLRRC-----NGYQGRPCLYYSMGQCLGACWRTVP 177 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALK-EQHPEMTQYHIIQNWL 243 EE+ + L + K ++ + T+Y + ++ Sbjct: 178 QEEYQKNIDAITRFLNGETGKAISDIKKKMKRASDSTEYELAADFR 223 >UniRef50_C4XSA3 UvrABC system protein C n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XSA3_DESMR Length = 691 Score = 223 bits (568), Expect = 7e-57, Method: Composition-based stats. Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 13/232 (5%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQSRRISWI 83 + P PGVYL G + LY+GK+ N+RSR+ S+ R AA++ + + + Sbjct: 7 KNFPMSPGVYLMKGARGKI-LYVGKAKNLRSRLSSYFRNDAGLTVKTAALVAKVEGVDVL 65 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAPNL 142 TA E ALLLE+ LIK+ +P +N L+ ++ +L+ + Sbjct: 66 LTASEKEALLLESSLIKKHRPRYNIVLKDDKNYILFKLDKRSPFPRLAFTRRVERDGAAY 125 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 FG F + AA + + L +R R C ++ +C C E+ Sbjct: 126 FGPFTSAAAARATWKELGRAFPL-RKCGDRAMANRVRPCLYHSIGQCLAPCVLAVDPGEY 184 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 A +R+ L + A L+ EM Q + + L A Sbjct: 185 AALVRRVEAFL-----TGRSAEVLRAVEHEMEQAAESLAFEKAAGLRDLLRA 231 >UniRef50_Q1D921 UvrABC system protein C n=2 Tax=Cystobacterineae RepID=UVRC_MYXXD Length = 646 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 8/217 (3%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQSR 78 L L+ LPT PGVYL + +Y+GK++N+RSRV S+ + + + Sbjct: 5 LLEKLDALPTEPGVYLMKDRRGQV-IYVGKAINLRSRVRSYFNRTGDTRVFVSLLDQLLG 63 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEVDFS 137 + + + E ALLLE LIK+ +P FN L+ ++Q +L+L+ + + Sbjct: 64 DLETVLVSNEKEALLLENELIKKHRPRFNVLLKDDKQFISLRLDRTQPYPRLEVVRKYER 123 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG +++ A + L+ + +L +R R C + RC C Sbjct: 124 DGARYFGPYSSAGAIRETLRVVNRFFRLRTCT-DHVLANRKRPCLLHQIGRCPAPCVYPV 182 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMT 234 E++ + + + L + L+ + Sbjct: 183 PQEDYHRSVDEVVMFLEGKAGELVEGLRLRMKRAAQE 219 >UniRef50_D2L1M6 Excinuclease ABC, C subunit n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L1M6_9DELT Length = 695 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 54/232 (23%), Positives = 93/232 (40%), Gaps = 13/232 (5%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQSRRISWI 83 + PT PGVYL G + LY+GK+ N+R+R+ S+ R AA++ + + + Sbjct: 7 KNFPTSPGVYLMKGGKGKI-LYVGKAKNLRARLGSYFRGETGHTVKTAALVGRIEAVDVL 65 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAPNL 142 TA E ALLLE+ LIK+ +P +N L+ ++ +L+ + Sbjct: 66 LTASEKEALLLESSLIKKHRPRYNVVLKDDKNYILFKLDKRSDFPRLAFTRRVERDGATY 125 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 FG F + AA + + L +R R C + +C C +E+ Sbjct: 126 FGPFTSAAAARTTWKELGRVFPL-RKCGDRTLHNRVRPCLYYFIGQCLAPCVLPVEPQEY 184 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 +R+ L + A L+ EM + + + L +A Sbjct: 185 MTLVRRVEAFL-----TGRSAEILRAVQKEMEEAAERLAFEQAAKLRDLLKA 231 >UniRef50_B6AR33 Excinuclease ABC, C subunit (UvrC) n=3 Tax=Leptospirillum RepID=B6AR33_9BACT Length = 632 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 12/229 (5%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSR 78 + L LP PGVYL E+ + LY+GKS +++ RV S+ R+ A ++ + R Sbjct: 17 VEDRLRTLPEEPGVYLMKSETGEV-LYVGKSRSLKDRVRSYFQETRVRSARIALLVSRVR 75 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS 137 + I T E+ AL+LE LIK +P +N LR ++ L+ + + + Sbjct: 76 DLEIIRTKTELDALILENTLIKRYRPRYNVLLRDDKTYPYLKFSWNDPFPRLTITRRVRN 135 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC-GK 196 FG + N A L+ I L + L+ + R C +KRC G C G Sbjct: 136 DGNLYFGPYPNPSAMKDTLRLIRRTFPLATCTIPLDQPTLERPCVEYQIKRCLGPCVAGL 195 Query: 197 ESHEEHALRLRQSLERLRVVCWP----WQGAVALKEQHPEMTQYHIIQN 241 + E+ L+ + + + ++ E + +++ Sbjct: 196 TTETEYRQVAMGVRLFLQGKSNDLLFLLENEMKARAKNLEFEKAAAVRD 244 >UniRef50_Q2RS75 UvrABC system protein C n=13 Tax=Alphaproteobacteria RepID=UVRC_RHORT Length = 639 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 95/242 (39%), Gaps = 16/242 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPD----EAAMLRQS 77 E +R+ L +P+ PGVY + LY+GK+ N++ RV+++ + M+ + Sbjct: 31 EAIRAALRTMPSSPGVYRMIDGKGDV-LYVGKARNLKRRVINYTQPHRLPVRIQRMIAAT 89 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKEVDF 136 + + T E ALLLE+ LIK+ +P +N LR ++ +++ + Sbjct: 90 LTMEVLTTHTEAEALLLESNLIKKLKPRYNILLRDDKSFPYIEITSDHAFPRIVKFRGTL 149 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 + FG FA+ A L + + C + SR R C +KRCA C Sbjct: 150 RKGGEYFGPFASAGAVTSTLTALQKTFLLRTCADNVF---ASRSRPCLLFQIKRCAAPCV 206 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 + + ++ + ++ L + M + ++ +A Sbjct: 207 DRVAEADYKALVEEARAFLSG-----SSKALQHDLAKRMDEAAQALDYEQAAIFRDRIKA 261 Query: 255 TT 256 T Sbjct: 262 LT 263 >UniRef50_Q1AUH1 UvrABC system protein C n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=UVRC_RUBXD Length = 611 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 93/242 (38%), Gaps = 12/242 (4%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLR 75 PE+ + LP PGVY+F + LY+GK+ NIRSRV S+ P A + Sbjct: 2 PENSYPDRSHLPASPGVYIFRDGEGRV-LYVGKARNIRSRVASYFTRSGDGRPKIAELRE 60 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEV 134 + R+I +I GE AL+LEA LIK +P FN LR ++ + + V+A Sbjct: 61 RVRQIDFIAARGETEALVLEANLIKRHRPRFNASLRDDKSYPYIVVTTGDEYPRVFATRG 120 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 FG F + + L + + G C + R A C Sbjct: 121 PHDPRHRYFGPFPSAGSVHATLDVLNKTFRFRKCRGPEPGRRSGIPCLNYHIGRSAAPCI 180 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 G S EE+ + + L ++E+ +M + ++ + A Sbjct: 181 GAVSKEEYGAIIADVIAFLEGRVDGL-----IREREEQMRRAAAEMDFERAARLRDEAAA 235 Query: 255 TT 256 Sbjct: 236 LR 237 >UniRef50_B7RUJ0 GIY-YIG catalytic domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RUJ0_9GAMM Length = 282 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 90/260 (34%), Positives = 128/260 (49%), Gaps = 17/260 (6%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPD----EAAMLRQSRRISWICTA 86 +P PG+Y F + LYIGKS+NIRSRV +HL + ML +++ I TA Sbjct: 1 MPDCPGIYRFLDRNG-CALYIGKSINIRSRVKTHLAEARGLSRKHRMLSETKCIDVRPTA 59 Query: 87 GEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS-RAPNL--- 142 GEIGALLLE IK+Q P FN+R R +++ + L R + +S P + Sbjct: 60 GEIGALLLENDAIKKQAPAFNRRQRSIKKMWSYALTSGRGEFCVPTLQSYSMHKPEILAS 119 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 +G + + A +AL+ + LC +LGLE CF + RC GAC ES E H Sbjct: 120 YGAYTSPSRAKKALEQATRDHGLCPRILGLEAGKG--PCFNFQIGRCRGACADFESAESH 177 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEM-----TQYHIIQNWLWLGAVNSLEEATTL 257 RL+ +L WP V L E + ++H++ NW +LG ++LE A + Sbjct: 178 NRRLKAALRFKGFSAWPVASPVLLHEVASDPTLQPAQEWHLLHNWAYLGTFDTLELARSA 237 Query: 258 IRTPA-GFDHDGYKILCKPL 276 P FD D Y IL + L Sbjct: 238 KLLPGFMFDKDTYHILRRAL 257 >UniRef50_B2RM62 UvrABC system protein C n=4 Tax=Bacteroidetes RepID=UVRC_PORG3 Length = 600 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 9/205 (4%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQS 77 + L L LP +PG Y + E + +Y+GK+ N+R RV S+ ++RQ Sbjct: 5 DELNIILPTLPEKPGCYQYFDEDGKV-IYVGKAKNLRRRVSSYFYKEHADRKTRILVRQI 63 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 R I +I E ALLLE LIKE QP +N L+ + ++ + + ++A Sbjct: 64 RSIKYIVVDSEGDALLLENSLIKEYQPRYNVLLKDGKTYPSIVIKREPFPRIFATRDIKK 123 Query: 138 RAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRG--RACFRSALKRCAGAC 193 FG + A L+ + + + C L E + +G R C + +K+C G C Sbjct: 124 DGSEYFGPYPGALIAKGMLRLVKEIYPIRTCKLDLREEKIRQGRYRVCLQYHIKKCKGPC 183 Query: 194 CGKESHEEHALRLRQSLERLRVVCW 218 G ++ E+ + + + LR Sbjct: 184 IGNQTSNEYESNVSEIRDLLRGNLH 208 >UniRef50_B0VH58 Excinuclease ABC, C subunit n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VH58_9BACT Length = 601 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 102/271 (37%), Gaps = 20/271 (7%) Query: 19 EYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAML 74 + E + + L LP +PGVYL+ + T+ +YIGK++N++ R+ ++L ++ Sbjct: 3 AFSEEIETKLALLPEQPGVYLWKDKDGTI-IYIGKALNLKHRIKNYLNPAGKDLKTEHLI 61 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKE 133 + + +I T E A +LEA L+K +P +N L+ +++ +++ + ++ Sbjct: 62 KNIADLDYIITNSEADAFILEATLVKRYRPKYNIMLKDDKRYPFVKITVNEPFPRIFITR 121 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 FG + R L+ + L + + + C L +C C Sbjct: 122 ELLKDNAKYFGPYTEVRYLRNTLRDLEWIFPLRSCNRNIPKIKYKQPCMNFQLGKCPAPC 181 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 G S + +A + Q L L E EM A EE Sbjct: 182 IGNISQKNYAKTVNQLLRFFNGRYTEL-----LDELRTEMQN---------ASAELRFEE 227 Query: 254 ATTLIRTPAGFDHDGYKILCKPLLSGNYEIT 284 A + + + GN +I Sbjct: 228 AGKFRDRIIAIERIQKRQSVFNVEGGNIDII 258 >UniRef50_B2I637 UvrABC system protein C n=15 Tax=Xanthomonadaceae RepID=UVRC_XYLF2 Length = 621 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 65/270 (24%), Positives = 104/270 (38%), Gaps = 17/270 (6%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRI 80 + F L T PGVY + DT+ LY+GK+ +R RV S+ AML Q R+ Sbjct: 12 KRFAAHLSTAPGVYRMYAADDTL-LYVGKAGALRKRVASYFNGTPKNTRLTAMLAQVVRM 70 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 T E ALLLE +LIK P +N LR ++ + L + + Sbjct: 71 DVTITRNEAEALLLENQLIKSLTPRYNVLLRDDKSYPYVLLTREAWPRIALHRGPQIVPG 130 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG + A L I KL +R R C + + RC+ C +H+ Sbjct: 131 RYFGPYPGVTAVRDMLNLIHKLFKL-RSCEDSVFRNRSRPCLQYQIGRCSAPCVNVVTHD 189 Query: 201 EHALRLRQSLERLRVV----CWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 + + + L A+ + +H E Q +++ L ++ S++ Sbjct: 190 NYTEAVHRVTLFLEGKSDLLAEELIQAMQVASEHLEFEQAARLRDL--LTSLRSMQNRQY 247 Query: 257 LIRTPAGFDHDGYKILCKPLLSGNYEITEL 286 + A D +L LSG+ + L Sbjct: 248 VDGRAADLD-----VLACAALSGHACVLLL 272 >UniRef50_D2LI59 Excinuclease ABC, C subunit n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LI59_RHOVA Length = 689 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 7/211 (3%) Query: 11 EFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---- 66 E A+A P+ + ++ L T PGVY + + +Y+GK+ N+++RV ++ R Sbjct: 17 EDAASAPETGPQVIHRYVKHLGTGPGVYRMVDLAGEV-IYVGKARNLKNRVQNYTRMGGH 75 Query: 67 TPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV 126 T AAM+R + + ++ T E ALLLEA LIK +P +N R ++ + + + Sbjct: 76 TNRIAAMIRATATMEFVNTRTEAEALLLEANLIKRFKPRYNVSFRDDKSFPYIVIRRDQE 135 Query: 127 DVVYAKEVDFSR-APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSA 185 AK + FG FA+ A + + T+ L SR R C Sbjct: 136 AAQIAKHRGARTVKGDYFGPFASAGAVNRTINTLQRAF-LLRTCADSVYDSRTRPCLLFQ 194 Query: 186 LKRCAGACCGKESHEEHALRLRQSLERLRVV 216 +KRCAG C + ++++ + ++ L Sbjct: 195 IKRCAGPCTREIPLDDYSKLVDEATAFLSGK 225 >UniRef50_B0SB16 UvrABC system protein C n=6 Tax=Leptospira RepID=UVRC_LEPBA Length = 614 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 62/275 (22%), Positives = 110/275 (40%), Gaps = 20/275 (7%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLRQSR 78 ++ + +L + PG YL+ E + +Y+GK++ ++SRV S+L A+ + Sbjct: 9 TIQEKIKNLGSLPGCYLWKNELGQV-IYVGKALKLQSRVRSYLNPNQKDRKTRALFVELY 67 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFS 137 + WI T E ALLLEA LIK+ P FN RL+ +++ L + + +V+ Sbjct: 68 DLDWIATGTEKEALLLEATLIKKYNPKFNVRLKDDKKYPFLCVSTSEDYPMVFLTRKVKD 127 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG F + +AA L+ I + L L R C + RC G C G Sbjct: 128 NGDRYFGPFTDVKAARDTLELIHRIFPIRKTKLKLPLPKPQRPCLNFHMGRCLGPCQGNV 187 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + + ++ + + L L E E + + + + E A L Sbjct: 188 TKDTYSELVDEILRFL--------------EGKKERLVADLKKAMMDASSKMEYERAGFL 233 Query: 258 IRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 + + K + G+ +I + D+ Sbjct: 234 KQRIEKINQLREKQTVVSMDGGDEDILGISKREDE 268 >UniRef50_C3XLG8 Excinuclease abc subunit c n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XLG8_9HELI Length = 618 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 59/271 (21%), Positives = 117/271 (43%), Gaps = 25/271 (9%) Query: 19 EYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----------T 67 ++L L +P GVY + + LY+GK+ N++ R+ S+ R + Sbjct: 7 PLSQNLLETLKKIPNSSGVYHYFDTQGKL-LYVGKAKNLKHRIKSYFRFTPNLAPAPNLS 65 Query: 68 PDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ--LNEKR 125 P M+ Q + +I E AL+LE LIK+ +P +N LR ++ L L E Sbjct: 66 PRITQMVSQIAHLRYIVVENENDALILENSLIKQLKPKYNVLLRDDKTYPYLCVDLQEDF 125 Query: 126 VDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSA 185 ++ +++ + FG F++ A L +I + L + +AC Sbjct: 126 PRILLTRKIFKKQGLRYFGPFSSG--ARDLLDSIYEIFPLAQKESCK---NGKKACLFYQ 180 Query: 186 LKRCAGACCGKESHEEHALRLRQSLERL---RVVCWPWQGAVALKEQHPEMTQYHIIQNW 242 + RC C GK S +++A L+ +LE + + + P + + Q+ + I+++ Sbjct: 181 IHRCLAPCEGKISTKDYAKILQNALECVENPKKILAPLEQKMLQLSQNLRFEEALILRD- 239 Query: 243 LWLGAVNSLEEATTLIRTPAGFDHDGYKILC 273 + + +L +++ D D + ++C Sbjct: 240 -RIAKIKNLTPLSSVDFANLV-DLDIFALVC 268 >UniRef50_B8DGB7 UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C) n=18 Tax=Listeria RepID=B8DGB7_LISMH Length = 366 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 57/239 (23%), Positives = 96/239 (40%), Gaps = 23/239 (9%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQSR 78 + L+ L LP PG Y++ E++ + LYIGKS +++RV S+ + A ++RQ R Sbjct: 3 DKLQKKLTLLPESPGCYIYRDENNEI-LYIGKSKCLKNRVKSYFHSKQIGKTARLVRQIR 61 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 + I T E ALLLE LI++ QP FN +L+ +++ ++ + Sbjct: 62 DLELIITTSEKEALLLEMILIQKYQPPFNIQLKEGTSYPYIKITNEKNPHIEVVFEVKRD 121 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 + FG + R +A Q + I LC GR C L C G C + Sbjct: 122 GAHYFGPYPGRFSARQTVDLIEKLFPLCRC-----DGKPGRPCLYYHLGLCLGPCQAEID 176 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + ++ + L E + + + ++ L E A L Sbjct: 177 PAVYKKQIHKISRFL--------------EGDVKNVKAKLQEDMLTATENLEFERAAEL 221 >UniRef50_D0LVJ3 Excinuclease ABC, C subunit n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LVJ3_HALO1 Length = 689 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 10/200 (5%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-------MLRQS 77 + F +PT PGVYL S + Y+GK+ N+R+RV + R +A + R Sbjct: 11 KEFFERIPTAPGVYLMKDRSGRVV-YVGKAKNLRTRVRQYFRPGADARFFVAAGLLARVL 69 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK-RVDVVYAKEVDF 136 I + E ALLLE LIK+ QP FN LR ++Q L+++ V Sbjct: 70 ADIDTVVVDNEKEALLLENHLIKKHQPRFNINLRDDKQYLVLRIDPNADYPRVEVVRNIR 129 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 FG + + + + L+ + +L +R R C + +KRC G C Sbjct: 130 DDQARYFGPYHSATSCRETLRLLNRHFQLRTCT-DHVLRTRTRPCLQYQIKRCPGPCVYP 188 Query: 197 ESHEEHALRLRQSLERLRVV 216 + +A ++ + L Sbjct: 189 VERDAYAEQVDDVMMFLAGK 208 >UniRef50_Q1IZB2 UvrABC system protein C n=4 Tax=Deinococcus RepID=UVRC_DEIGD Length = 616 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 54/230 (23%), Positives = 90/230 (39%), Gaps = 9/230 (3%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-DEAAMLRQSRRISWICTA 86 L LP PGVY+F P+YIGK+VN+RSRV H + + + +I T Sbjct: 6 LPVLPASPGVYIFR--RGGTPIYIGKAVNLRSRVAQHFKAGGKSGKFTALADSLDFITTR 63 Query: 87 GEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLF 146 E+ AL+LEA LIK+ +P +N L+ ++ L+L + ++ + +G + Sbjct: 64 NEVEALILEANLIKQHRPHYNVLLKDDKHYPFLKLTNEAFPMLVVTRRVLKDGASYYGPY 123 Query: 147 ANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRL 206 + A + I L GL + R C + RC G C + +A + Sbjct: 124 PDASAVRRVKHLIDTMFPL-RKNSGLPMQKKPRPCLNYHMGRCLGPCVDAADPQAYAQVV 182 Query: 207 RQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 L P + +M Q++ + +A Sbjct: 183 EDVKALLEGRAAP-----VIARLKADMQAAARAQDFEQAARLRDRVQAVE 227 >UniRef50_B5YF86 UvrABC system protein C n=2 Tax=Dictyoglomus RepID=UVRC_DICT6 Length = 599 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 96/232 (41%), Gaps = 9/232 (3%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR--TPDEAAMLRQSRR 79 L+ + + P GVY+F+ S + +Y+GK+ N+R RVLS+ +P +L++++ Sbjct: 8 MDLKQKVENFPESTGVYIFYDHSGKV-IYVGKAKNLRKRVLSYFNDDSPKSNYILKKAKN 66 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSR 138 I + T E AL+LE+ LIK+ +P+ N +LR ++Q L+L + + Sbjct: 67 IEFYITDTETEALILESVLIKKYRPIMNVQLRDDKQYPMLKLTLYEEYPRLVLARRFEDD 126 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 +G + + + + L L R C + C C + Sbjct: 127 GARYYGPYTQSGTVRETISMVKKIFNLRSCNWNLPKSKPKRPCLNYFIGNCKAPCQNYIT 186 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS 250 EE+ ++ ++ L +++ + +M +Y + + Sbjct: 187 KEEYWEIVKGVIDFLDGKYEE-----IIEKLYDQMQEYSKNLEFEKAAKIRD 233 >UniRef50_C0QWI5 Excinuclease ABC, C subunit n=2 Tax=Brachyspira RepID=C0QWI5_BRAHW Length = 613 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 101/279 (36%), Gaps = 14/279 (5%) Query: 18 YEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAAM 73 E ++ L +P + GVY + +YIGK+ +++ RV S+ A+ Sbjct: 3 QEVKSYIHDKLKRIPDKSGVYFMKDSKSEI-IYIGKAKSLKKRVSSYFNNSNKDAKTTAL 61 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKE 133 + R I +I T E+ AL+LEA +I++ +P +N L+ + + + + V Sbjct: 62 VEHIRDIEYILTENEVEALILEAEMIRKHKPHYNILLKDQKSFPFIAITNEHFPRVIKAR 121 Query: 134 -----VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKR 188 + + +G + A ++ I D KL R C + + Sbjct: 122 NVIDKDNARKYKKYYGPYVAAERADNIVKFIIDNFKLRRCKYDFPLKRAIRPCLYHHIGK 181 Query: 189 CAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKE-QHPEMTQYHIIQNWLWLGA 247 C C E++ + ++ L + + H E ++ ++ Sbjct: 182 CTAPCADLIKEEDYDKTIDDAIMVLEGNVDELVARLKQEMFVHAEKLEFEAAKDLRDKID 241 Query: 248 VNSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITEL 286 + I P D D I+ +GNY I L Sbjct: 242 LLKYITVEQSIYIPESDDID---IIGAYGENGNYTIVIL 277 >UniRef50_B6INU7 Excinuclease ABC, C subunit, putative n=18 Tax=cellular organisms RepID=B6INU7_RHOCS Length = 694 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 106/262 (40%), Gaps = 16/262 (6%) Query: 14 AAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE--- 70 A + E ++ +L LP RPGVY + LY+GK+ N++ RV ++ + Sbjct: 79 VADLARGVETIKGYLRTLPDRPGVYRMLSAEGDV-LYVGKARNLKRRVTNYTQVAKLPVR 137 Query: 71 -AAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDV 128 M+ ++ + ++ T E+ ALLLE+ LIK P +N LR ++ + + + Sbjct: 138 LQRMVAETVTMEFVTTHTEVEALLLESNLIKRLMPRYNVLLRDDKSFPHILITGDHPFPQ 197 Query: 129 VYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSAL 186 + RA + +G FA+ A + + + + C + SR R C + + Sbjct: 198 LTKHRGARDRAGSYYGPFASAGAVNRVMTALQRAFQIRTCTDTVF---ASRTRPCLQFQI 254 Query: 187 KRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLG 246 KRC C G+ +A ++ ++ L Q +A M + Sbjct: 255 KRCTAPCVGRVGDAGYAAQVAEAKSFLSGRSSEVQARLA-----RAMQDAAEALEFETAA 309 Query: 247 AVNSLEEATTLIRTPAGFDHDG 268 + A T I+ + +G Sbjct: 310 KLRDRIRALTAIQAHQDINVEG 331 >UniRef50_UPI0001977D11 excinuclease ABC subunit C n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI0001977D11 Length = 627 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 120/280 (42%), Gaps = 36/280 (12%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR------------TPDEAAMLR 75 L +LPT+PG+Y + + D + LY+GK+ N+++R+ S+ + A M+ Sbjct: 22 LQNLPTQPGIYQYFDKDDNL-LYVGKAKNLKNRIKSYFSIHNDIITPKANLSQRIALMVS 80 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK--RVDVVYAKE 133 Q +I + T + AL+LE LIK +P +N LR ++ + ++ ++ Sbjct: 81 QVAKIHTLLTQSQEDALILENSLIKSLKPKYNILLRDDKTYPYIYIDTSATFPRFEITRK 140 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 S+ FG F + A + L ++ D L L +AC + +C C Sbjct: 141 ALQSKHIEYFGPFVSG--ARELLDSLYDALPLVQKKSCL---KGKKACIFHQIHKCPAPC 195 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 K S ++A + Q+ + +G + + E ++ H +Q + +++ Sbjct: 196 ENKISQSQYAEYITQA----KAFIDDRKGLIEILESKMQILS-HNLQFEEAAKIRDRIQK 250 Query: 254 ATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQR 293 TL +T + D ++SG+Y+I LD A Sbjct: 251 LKTL-KTQSIID----------IMSGDYDIFLLDSAGQNH 279 >UniRef50_B9LUM9 UvrABC system protein C n=9 Tax=Halobacteriaceae RepID=UVRC_HALLT Length = 592 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 6/205 (2%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL--RTPDEAAMLRQSRR 79 + +R DLPT PGVY F + LY+GK+VN+R+RV S+ R+ M+ ++ R Sbjct: 4 DAVRERAADLPTEPGVYQFR--AGETTLYVGKAVNLRNRVRSYADPRSGRIRGMVGRADR 61 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRA 139 I + T E ALLLEA LIK +P +N RL+ ++ + + + V + D Sbjct: 62 IEFAVTDTETQALLLEANLIKRLRPRYNVRLKDDKSYPLVAITDHPVPRIEVTR-DPEEG 120 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 +G F ++ ++ I DE +L G + +R R C + C+ C G+ Sbjct: 121 AVAYGPFTSKGRVETVVKAIRDEYRL-RGCSDHKYANRDRPCLDYEMGICSAPCTGEIDP 179 Query: 200 EEHALRLRQSLERLRVVCWPWQGAV 224 E +A + + + Sbjct: 180 ESYAEDVAAARRFFEGETGVLADPL 204 >UniRef50_B9Z6P2 DNA polymerase III, epsilon subunit n=2 Tax=Chromobacterium group RepID=B9Z6P2_9NEIS Length = 476 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 95/264 (35%), Positives = 135/264 (51%), Gaps = 17/264 (6%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAAMLRQSRRIS 81 L+ LP PGVYL G+ Y+G+ N+R +VL+H + RR+ Sbjct: 193 ELLDSLPDVPGVYLLLGDDGLPL-YVGRGANLRRQVLAHFYADKAHGKTLHIAEPIRRVE 251 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK-----RVDVVYAKEVDF 136 W T GE GA+LLE + I+ +P N+R +LC++QL E R +V A E+DF Sbjct: 252 WRETLGEFGAMLLELQWIRAHRPRHNRRGGPGDELCSIQLGEGADGFVRPRIVLAHELDF 311 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL--SRGRACFRSALKRCAGACC 194 SR +L+GLF + R A + LQ +A Q LC +LG+E + +G C C GAC Sbjct: 312 SRTADLYGLFRHPREARKMLQDMARAQGLCQAVLGVEQMTSRKGAPCGGFQAGLCRGACI 371 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHP--EMTQYHIIQNWLWLGAVNSLE 252 G+E +H RL +L R+RV WP+ GAVA+ E H+ W +LG ++ Sbjct: 372 GREPAMQHNTRLMSALSRVRVKNWPFPGAVAVVEWDEVTGERVEHVFDRWCYLGTRHAAS 431 Query: 253 EATTLIRTPAGFDHDGYKILCKPL 276 E TL P+ FD D YK+ L Sbjct: 432 E--TLEGQPS-FDLDSYKLFSAYL 452 >UniRef50_A8SNK4 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SNK4_9FIRM Length = 620 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 6/193 (3%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE----AAMLRQSRRISWI 83 L LP PGVY+ + + D + +Y+GKSV++++RV S+ T + AM+ R +I Sbjct: 14 LKKLPDLPGVYIMYDKDDKI-IYVGKSVSLKNRVRSYFTTNHKYKKVQAMVEHIHRFEYI 72 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLF 143 E +L+LEA LIK+ +P +N L+ ++Q +++ ++ + F Sbjct: 73 IVNNETESLVLEANLIKKNRPKYNINLKDDKQYPYIKITNEKFPKILKVRDIKEDKAQYF 132 Query: 144 GLFANRRAALQALQTIADEQKLCYGLLGLEPLS-RGRACFRSALKRCAGACCGKESHEEH 202 G F + ++ + L + R C L RC+ C E + Sbjct: 133 GPFPTISDLEKLMELSILIYNIRDCKLNFDKGKFLQRPCMSYYLGRCSAPCTQNIDRENY 192 Query: 203 ALRLRQSLERLRV 215 +++ ++ L Sbjct: 193 NNDVKRVIKFLSG 205 >UniRef50_Q21AW5 UvrABC system protein C n=89 Tax=Alphaproteobacteria RepID=UVRC_RHOPB Length = 699 Score = 219 bits (559), Expect = 7e-56, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 100/246 (40%), Gaps = 12/246 (4%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLRQSRR 79 + + PT PGVY + + LY+GK+ N++ R+ S+ R + M+ + Sbjct: 83 IAQAVRLAPTSPGVYRMLNAASDV-LYVGKAKNVKKRLASYARPTGHVVRISRMIAATVS 141 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV-DVVYAKEVDFSR 138 + I TA E ALLLEA LIK+ +P FN LR ++ + + + SR Sbjct: 142 VEIISTATETEALLLEANLIKQLRPRFNVLLRDDKSFPYILITGDHWAPQIIKHRGAQSR 201 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG FA+ + + + + L SR R C +KRCAG C G+ Sbjct: 202 PGRYFGPFASVGSVNRTITALQRAF-LMRSCTDAFFESRTRPCLLYQIKRCAGPCTGEID 260 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 + +R++ + L + + +E EM + + A + I Sbjct: 261 FPGYTALVREATDFLSG-----RSRLVKQELAGEMEKASAELEFETAALYRDRLAALSAI 315 Query: 259 RTPAGF 264 ++ G Sbjct: 316 QSQQGI 321 >UniRef50_C7RAS4 Excinuclease ABC, C subunit n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAS4_KANKD Length = 612 Score = 219 bits (559), Expect = 7e-56, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 98/250 (39%), Gaps = 21/250 (8%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQS 77 ++ L L +PGVY G+ LY+GK+ N+ +RV S+ ++P ++ Sbjct: 13 PQIKKILAHLSHKPGVYQMLGKDGE-TLYVGKAKNLSNRVKSYFTRQYQSPKTELLVTYI 71 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 I T E ALLLE LIK+ +P FN R ++ + L+ + Sbjct: 72 EDIHTTVTETETEALLLENNLIKKYKPRFNVLFRDDKSYPYVFLSAGDFPRLAYHRGAKK 131 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 + FG F + A Q+L I ++ +R R C + +KRC C Sbjct: 132 EKGDYFGPFPSSSAVRQSLSLIQKTFQI-RQCEDSYFANRSRPCLQYQIKRCTAPCVDYI 190 Query: 198 SHEEHALRL-----------RQSLERLRVVCWPWQGAVALKEQHPEMTQY----HIIQNW 242 S E++A + Q ++RL+ + + Q H++Q Sbjct: 191 SKEDYAKDVENVKLFYQGKSEQVIKRLQKKMDVASQELDFELAARYRDQIKQMRHVMQQQ 250 Query: 243 LWLGAVNSLE 252 + G + L+ Sbjct: 251 VISGTASDLD 260 >UniRef50_Q5P3L6 Nuclease subunit Cho of the excinuclease complex (UvrC homolog protein) n=2 Tax=Rhodocyclaceae RepID=Q5P3L6_AZOSE Length = 469 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 97/292 (33%), Positives = 142/292 (48%), Gaps = 17/292 (5%) Query: 13 EAAAIYEYPEHLRS-FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTP 68 A + P L L +P PGVY F GE+D + LYIG+S ++R+RV+ H R Sbjct: 180 RAMKLPARPPGLPEGALEGVPDAPGVYSFFGENDRL-LYIGRSASLRARVMEHFSPGRAD 238 Query: 69 DEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVD- 127 EA + RQ RR+ W TAGE A L EA L++ ++PL + + L+L +R Sbjct: 239 SEAGLARQVRRVEWEETAGEFAASLREADLLRARRPLHARPAVGGEDVFGLRLVPQRKRA 298 Query: 128 ----VVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFR 183 V D + + G F R+ A L+ +A +LC LGLE S AC Sbjct: 299 PIFERVPLHATDPAAWEAVHGTFRTRKEADSLLRELAQLYQLCPRRLGLEGGSG--ACGA 356 Query: 184 SALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQ--HPEMTQYHIIQN 241 +RCAG C GKES H RL +L + + WPW GAV ++E+ H +H++ + Sbjct: 357 HEARRCAGVCTGKESIAAHDARLAGALGSVTLREWPWVGAVVIEERCAHSGCEAFHLVDH 416 Query: 242 WLWLGAVNSLEEATTLIRTPAG--FDHDGYKILCKPLLSGNYEITELDPAND 291 W LG+ +S E L+ P FD D Y++L + + + + P D Sbjct: 417 WCHLGSADSAEALVALLHNPPARRFDLDTYRLLVRW-FAAEANLAAVRPVED 467 >UniRef50_C9R9D0 Excinuclease ABC, C subunit n=1 Tax=Ammonifex degensii KC4 RepID=C9R9D0_AMMDK Length = 622 Score = 219 bits (558), Expect = 9e-56, Method: Composition-based stats. Identities = 61/245 (24%), Positives = 101/245 (41%), Gaps = 15/245 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSR 78 E L LP PGVYLF E + +Y+GK+ ++R RV S+ + +P A+LR+ Sbjct: 3 EELLLKAQSLPAEPGVYLFKDERGEV-IYVGKAASLRQRVKSYFQGNPSPKVEAILRRVA 61 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS 137 + ++ T E+ AL+LEA LIK +P +N L+ ++ +++ E+ V Sbjct: 62 NLEFMVTDNEVEALILEANLIKLHRPRYNVVLKDDKSYPYIKVTVEEEYPRVLFARRRDD 121 Query: 138 RAPNLFGLFANRRAALQALQTIA--DEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 + FG + A + L+ + + C G + P R C +KRC G C G Sbjct: 122 KRARYFGPYTKAGAVYETLRFLRTLFPYRSCSGPV---PRPNSRPCLNYHIKRCPGPCTG 178 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 + E + + L L++ EM Q + +A Sbjct: 179 QVDPEVYRRNIDSLCLFLEGRY-----RQVLRQLEREMKQAAEELAFERAAVYRDRLQAL 233 Query: 256 TLIRT 260 LI Sbjct: 234 KLILE 238 >UniRef50_Q26GF0 Excinuclease ABC, C subunit n=5 Tax=cellular organisms RepID=Q26GF0_9BACT Length = 599 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 96/244 (39%), Gaps = 23/244 (9%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE----AAMLRQSRR 79 L + LPT PGVY ++ + + LY+GK+ N++ RV S+ + +M+++ Sbjct: 6 LEVQIRILPTTPGVYQYYDKDHKL-LYVGKAKNLKKRVSSYFTKNHDSYRIKSMVKKIVT 64 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRA 139 I I E+ ALLLE LIK + P +N LR ++ L + ++R V+ Sbjct: 65 IEHIVVETEMDALLLENSLIKNRNPRYNIMLRDDKTYPWLCIKKERFPRVFLTRRMIKDG 124 Query: 140 PNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRG--RACFRSALKRCAGACCG 195 +G F++ + L I + C L + ++ G + C + CAG C Sbjct: 125 SEYYGPFSSVKTVRALLDLIKGLYPLRTCKYDLSADKINAGKYKVCLEYHIGNCAGPCEN 184 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 S +A + + + + H + L + E+A Sbjct: 185 LMSETAYAENIDNVRN--------------IVKGDYKNASKHFESQMMELASNMQFEDAQ 230 Query: 256 TLIR 259 + Sbjct: 231 RIKE 234 >UniRef50_C0QET6 UvrABC system protein C n=2 Tax=Desulfobacteraceae RepID=UVRC_DESAH Length = 606 Score = 219 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 13/235 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQ 76 + P PGVYL + T+ +Y+GK++N++ R+ S+ +L++ Sbjct: 3 PSVLERYQSAPQNPGVYLMKDKRGTI-IYVGKALNLKKRLASYFARETGHDMKTGVLLKK 61 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEVD 135 I TA E AL+LE+ LIK+ P +N L+ + L+++ K + Sbjct: 62 VVDFDLIVTATEHEALILESTLIKKHSPRYNVILKDGKSYPCLRIDTSKPFPALEVVRKI 121 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 FG +++ ++ ++ + KL ++ +R R C + C GACC Sbjct: 122 GDDNAVYFGPYSSVQSVRSTIKQVNKIFKL-RKCRDVQFANRTRPCLNYQINACLGACCN 180 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS 250 + S +E+A + + L+ + EM ++++ + Sbjct: 181 RVSRQEYARVVGDVILFLKGRA-----PDLINRLKFEMQTEADLEHFERAAQIRD 230 >UniRef50_O26541 UvrABC system protein C n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=UVRC_METTH Length = 579 Score = 219 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 101/238 (42%), Gaps = 18/238 (7%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSRRISWICT 85 LP GVY+F D + LY+GKS++IR RV S+ R P M+R I +I T Sbjct: 8 EKLPDATGVYIFRDRDDRV-LYVGKSISIRKRVSSYFREQENPRLRIMMRHLESIEYILT 66 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGL 145 E AL+LE+ LIK +P +N RL+ +++ +++ ++ V + +G Sbjct: 67 QNEKEALILESNLIKRYRPPYNVRLKDDKRYPFIKITDEEYPRVLIVRTIGRDSARYYGP 126 Query: 146 FANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHA 203 F + A + L+ I ++ C + G C S + C C G+ S E++ Sbjct: 127 FTDTGAVRRTLKLIKSLFRIRSCRRMDG--------PCLNSQIDLCYAPCDGRISREDYR 178 Query: 204 LRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTP 261 + + + +Q + + E+ + ++ + +E ++ Sbjct: 179 EIIEKVDLFFQGR---YQEVIEVLEEEMK-EASERLEFERAARIRDQIESIREVMERQ 232 >UniRef50_C6XFB9 Excinuclease ABC subunit C n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFB9_LIBAP Length = 616 Score = 219 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 107/253 (42%), Gaps = 14/253 (5%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQSRRISWIC 84 +P PGVY + + LY+GK+ N++ R+ S++ + + M+ Q I + Sbjct: 4 EQMPECPGVYQMLDIAGRV-LYVGKAYNLQKRIKSYMHSNNHTHRITHMISQINNIRFTV 62 Query: 85 TAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV-DVVYAKEVDFSRAPNLF 143 T E+ ALLLEA +IK +P FN LR ++ + + +K +Y + + F Sbjct: 63 TCTEVEALLLEANMIKRLKPRFNILLRDDKSFPYILITDKHKIPALYKHRDSSTIQGSYF 122 Query: 144 GLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHA 203 G FA+ A + + ++ L R R C +KRC+G C G+ S E++ Sbjct: 123 GPFASVDAVEKTINSLQRTFFLRSCA-DSVFRHRTRPCLLFQIKRCSGPCTGEISSEKYM 181 Query: 204 LRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPAG 263 + ++ + L + +A M Q + ++ + A+ + L Sbjct: 182 EFVHEAKKFLSGGNHNLKEKIA-----RNMNQATLKED--YESAIIHRDRLAALSHIQNH 234 Query: 264 FDHDGYKILCKPL 276 D ++ C L Sbjct: 235 NDSIYNRMDCFSL 247 >UniRef50_A8ESX8 UvrABC system protein C n=26 Tax=Epsilonproteobacteria RepID=UVRC_ARCB4 Length = 616 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 112/259 (43%), Gaps = 27/259 (10%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----------TPDE 70 +L+ L LP GVY + ++ + LYIGK+ +++RV S+ + +P Sbjct: 1 MNLQEKLQQLPNDAGVYQYFDKNGHL-LYIGKAKILKNRVKSYFKFTPKLQPADKLSPRI 59 Query: 71 AAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL--NEKRVDV 128 M+ + WI E AL+LE LIK+ +P +N LR ++ + + +E + Sbjct: 60 YKMISEVESCEWIVVPNEHDALILENSLIKQLKPKYNILLRDDKTYPYIFVDFDEDFPRL 119 Query: 129 VYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKR 188 + + S++ FG ++ A L +I + L + +AC +++ Sbjct: 120 DITRRIQKSKSIKYFGPYSTG--ARDMLDSIYEIVPLVQKKSC---VKGKKACLFYQIQK 174 Query: 189 CAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAV 248 C C K S EE+A + +LE + + + + + +M QY ++ + A+ Sbjct: 175 CLAPCENKISKEEYAKIVENALEYI------YNKTKLISKLNEKMLQYS--NDFRFEEAM 226 Query: 249 NSLEEATTLIRTPAGFDHD 267 + T+ ++ D D Sbjct: 227 TLRDRIKTIEKSQIKSDID 245 >UniRef50_C8QX27 Excinuclease ABC, C subunit n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QX27_9DELT Length = 610 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 56/240 (23%), Positives = 93/240 (38%), Gaps = 22/240 (9%) Query: 27 FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRRIS 81 + D PGVYL + LY+GK+V++R R+ S+ R + ML + ++ Sbjct: 6 MIADAADAPGVYLMRDAGGQV-LYVGKAVSLRKRLQSYSRIDPAGRSKTSVMLGKVAKVD 64 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAP 140 + T E AL+LEA LIK+ +P +N LR ++ L++ ++ + Sbjct: 65 TVLTRTEKEALILEAGLIKQHRPRYNVILRDDKSYPHLKVTVQEEWPRLLMTRRVSKDGA 124 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG +A+ A + L+ + L + RAC + RC C G + E Sbjct: 125 RYFGPYASPAAMWETLRLLNSLFPL-RRCKAKKFAPGQRACLNHQMGRCPAPCIGAITPE 183 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 + R+ Q L A+ E + A + EEA L Sbjct: 184 AYRQRVSQVL--------------AILEGRKRELTRELTGRMQEAAAGLNFEEAAALRDQ 229 >UniRef50_Q255T2 UvrABC system protein C n=17 Tax=Chlamydiaceae RepID=UVRC_CHLFF Length = 604 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 15/244 (6%) Query: 22 EHLRSF-LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLR 75 H++ F +P PGVYL S + LYIGK+ N+R+R+ ++ + ++ +++ Sbjct: 1 MHVKDFSPKIIPPSPGVYLMKDSSGEV-LYIGKAKNLRNRITTYFQKQGDSRERIPFLMK 59 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE----KRVDVVYA 131 ++ I I + E ALLLE LIK+ P +N L+ ++ L ++ R+D + Sbjct: 60 KTTDIETILVSNETEALLLENNLIKKYHPKYNVLLKDDKTFFCLAISLSHPWPRIDAIRT 119 Query: 132 KEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAG 191 K V S+ +FG + + A L+ I L E +R R C +KRC Sbjct: 120 KAVTSSKKQIVFGPYVSAEACQTLLEVIGQWFPLRT-CSNREFSTRKRPCILYEMKRCLA 178 Query: 192 ACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALK-EQHPEMTQYHIIQNWLWLGAVNS 250 C S EE+A L +++ L+ + E+ + ++ Q ++ + Sbjct: 179 PCVNFCSQEEYAETLEKAVLFLKGQVSEIIQKLEKSIEKASQEQKFE--QAGMYYRTLKL 236 Query: 251 LEEA 254 +++A Sbjct: 237 IQQA 240 >UniRef50_B5E2L2 UvrABC system protein C n=268 Tax=Bacilli RepID=UVRC_STRP4 Length = 615 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 104/264 (39%), Gaps = 27/264 (10%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQSRRI 80 ++S L LPT PG Y+ ++ T+ +Y+GK+ N+R+RV S+ R A++ + Sbjct: 5 IKSKLELLPTSPGCYIHKDKNGTI-IYVGKAKNLRNRVRSYFRGSHDTKTEALVSEIVDF 63 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 +I T I ALLLE LIKE +P +N L+ ++ +++ +R + Sbjct: 64 EFIVTESNIEALLLEINLIKENKPKYNIMLKDDKSYPFIKITNERYPRLIITRQVKKDGG 123 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAG--ACCGKES 198 FG + + AA + + + + CF + +C C Sbjct: 124 LYFGPYPDVGAANEIKRLLDRIFPFRKCTNPP-----SKVCFYYHIGQCMAHTICKKD-- 176 Query: 199 HEEHALRLRQSL-ERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 E + + Q + + L+ Q + E +M + L +A Sbjct: 177 -EAYFKSMAQEVSDFLKG-----QDNKIIDELKGKMAAAAQTMEFERAAEYRDLIQAIGT 230 Query: 258 IRTPAGFDHDGYKILCKPLLSGNY 281 +RT +++ K L + + Sbjct: 231 LRTKQ-------RVMAKDLQNRDV 247 >UniRef50_A5M6P1 Excinuclease ABC subunit C n=1 Tax=Streptococcus pneumoniae SP14-BS69 RepID=A5M6P1_STRPN Length = 553 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 104/264 (39%), Gaps = 27/264 (10%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQSRRI 80 ++S L LPT PG Y+ ++ T+ +Y+GK+ N+R+RV S+ R A++ + Sbjct: 5 IKSKLELLPTSPGCYIHKDKNGTI-IYVGKAKNLRNRVRSYFRGSHDTKTEALVSEIVDF 63 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 +I T I ALLLE LIKE +P +N L+ ++ +++ +R + Sbjct: 64 EFIVTESNIEALLLEINLIKENKPKYNIMLKDDKSYPFIKITNERYPRLIITRQVKKDGG 123 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAG--ACCGKES 198 FG + + AA + + + + CF + +C C Sbjct: 124 LYFGPYPDVGAANEIKRLLDRIFPFRKCTNPP-----SKVCFYYHIGQCMAHTICKKD-- 176 Query: 199 HEEHALRLRQSL-ERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 E + + Q + + L+ Q + E +M + L +A Sbjct: 177 -EIYFKSMAQEVSDFLKG-----QDNKIIDELKGKMAAAAQTMEFERAAEYRDLIQAIGT 230 Query: 258 IRTPAGFDHDGYKILCKPLLSGNY 281 +RT +++ K L + + Sbjct: 231 LRTKQ-------RVMAKDLQNRDV 247 >UniRef50_Q2G9G8 UvrABC system protein C n=2 Tax=Sphingomonadales RepID=UVRC_NOVAD Length = 658 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 65/298 (21%), Positives = 117/298 (39%), Gaps = 28/298 (9%) Query: 2 VRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRV 61 +R P +E A I E + L+ PGVY + LY+GK+ +++RV Sbjct: 38 LRGADRPDIELGAGVIRETVQTLKPK-------PGVYRMLDARGDV-LYVGKARALKNRV 89 Query: 62 LSHLR----TPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLC 117 ++ + M+ Q+R ++ + T E ALLLEA+LIK +P +N LR ++ Sbjct: 90 ANYTQVERLPNRLRRMVSQTRSMTIVTTNSEAEALLLEAQLIKRFRPPYNVLLRDDKSFP 149 Query: 118 ALQL-NEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS 176 + L + + N +G FA+ + + + L Sbjct: 150 FILLRGDHAFPRISKHRGARKAKGNYYGPFASAGSVNTTINALQKLF-LLRSCNDGFMAR 208 Query: 177 RGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQY 236 R R C ++RC+ C G+ S ++ +RQ+ + L GAV +E +M + Sbjct: 209 RDRPCLLYQIRRCSAPCVGRISEADYGELVRQAKDFLGGK----SGAVQ-REIEAQMHKA 263 Query: 237 HIIQNWLWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRA 294 ++ + A T I+ + +G GN ++ + Q A Sbjct: 264 AEDLDFERAAMLRDRLRAATFIQGSQAINAEG---------VGNADVFAMATKGGQVA 312 >UniRef50_C8X3R4 Excinuclease ABC, C subunit n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3R4_DESRD Length = 636 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 90/254 (35%), Gaps = 19/254 (7%) Query: 27 FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQSRRIS 81 + P PG YL E + +Y+GK+ +R R+ S+ + P M+ + I Sbjct: 5 RAKEYPDCPGTYLMKDERGRV-IYVGKAKVLRKRLASYFQEPDRLPRKTRVMMDKVWSIE 63 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAP 140 +CT E A LLE LIK+ +P +N LR ++ +L+ + Sbjct: 64 TLCTETEKEAFLLENSLIKKHRPRYNIILRDDKSYVLFKLDKRHPFPRLSMTRRVVQDGS 123 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG F + AA + + + L +R R C + + RC G C + Sbjct: 124 TYFGPFTSAVAARETWKLLNRLFPL-RKCKQTTFNNRVRPCLQYNIGRCLGPCVYDIPRQ 182 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 E+ +RQ L + L+ +M + + +A Sbjct: 183 EYQEVVRQVELFL-----TGRSKELLRRLRADMQAASEDLRFEDAARLRDQIQAVEQTVE 237 Query: 261 ------PAGFDHDG 268 P G D D Sbjct: 238 QQVAVLPGGKDRDV 251 >UniRef50_A9NEZ8 Excinuclease ABC, subunit C n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEZ8_ACHLI Length = 577 Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 17/216 (7%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSRRI 80 ++ L+ LPT PG Y+ +S + +Y+GK+ N+++RV S+ R ++ + Sbjct: 1 MKEKLSILPTEPGCYMMLDQSGEV-IYVGKAKNLKNRVSSYFRGAHNAKTEKLISEISDF 59 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVD-VVYAKEVDFSRA 139 ++I T E +L+LE LIK+ PL+N RL ++ L++ ++ +V ++ ++ + Sbjct: 60 NYIVTNSEQESLILEYNLIKKYAPLYNIRLIDDKSYPYLEITNEKDPMLVVSRYIEVDKT 119 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 LFG + N ++A + L+ + L + C + C G C + Sbjct: 120 KTLFGPYPNSKSARETLKLLQRLYPLRRC-----NPVDSKPCLYYHMGLCLGPCAHE--K 172 Query: 200 EEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQ 235 ++ + + L+ L E M Q Sbjct: 173 VDYKPNIERITRFLKG-----DTKEVLNELEERMKQ 203 >UniRef50_A8GP33 UvrABC system protein C n=14 Tax=Rickettsia RepID=UVRC_RICAH Length = 651 Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 101/240 (42%), Gaps = 20/240 (8%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT---PDEAAMLRQSR 78 E ++S L D P R GVY + + +Y+GK+ N++ R+ ++++ M+ + Sbjct: 9 ELIKSKLIDAPERCGVYRMFDVNKQV-IYVGKAKNLKKRLTHYIKSDLDNKTLRMIANTC 67 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS 137 + + T E+ ALLLEA+LIK+ QP FN L+ ++ ++L + + Sbjct: 68 FLEYSITNSEVEALLLEAQLIKKFQPKFNILLKDDKSFPFIKLRLDHDFPQLLKYRGKTL 127 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG FA+ L + KL SR R C + +KRC C GK Sbjct: 128 NDGKCFGPFASATEVNTTLTELQKIFKL-RSCTDNYFNSRTRPCMQYEIKRCYAPCVGKI 186 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + E++ + Q + L+ + Q ++ + L + EEA + Sbjct: 187 NKEDYRDLVAQVKDFLQG--------------RTKALQENLSKKMEELSSQMRFEEAAEI 232 >UniRef50_C9M9X8 Excinuclease ABC, C subunit n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9X8_9BACT Length = 496 Score = 216 bits (551), Expect = 7e-55, Method: Composition-based stats. Identities = 55/240 (22%), Positives = 87/240 (36%), Gaps = 12/240 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQ 76 E +R L LP RPGVYL H E + +Y+GK+ N++ RV S+ P ++ Sbjct: 2 ERIRGLLKKLPNRPGVYLMHDERGKI-IYVGKAKNLKRRVSSYFNHKDFAIPRLRKLVAT 60 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 I+ I TA + A ++E+RLIK QP FN L+ + + ++ + Sbjct: 61 VCDITTIRTASDAEAYIVESRLIKAYQPFFNVELKMGTRYPWAVVTDEPFPRLVVTRRR- 119 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 FG F + A L I L L R C + +C C G Sbjct: 120 DIKGRYFGPFISAGALKDVLHIIEKAFPLRSCKYDLTRTKLSRPCLDYGIGKCDAPCVGL 179 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 + E+ R+ + L A + M + + G + Sbjct: 180 CTAREYGERVDDVILLLSGQT-----ADLIARLRARMEECASRLEFEAAGVARDAIRSLW 234 >UniRef50_A2RLW6 UvrABC system protein C n=11 Tax=Bacilli RepID=UVRC_LACLM Length = 669 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 93/243 (38%), Gaps = 14/243 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA---MLRQSR 78 + +++ L LP PG YL ++ T+ +Y+GK+ N+++RV S+ ++ + Sbjct: 3 QTIKAKLELLPDSPGCYLHKDKNGTV-IYVGKAKNLKNRVRSYFHGSHNTKTELLVSEIE 61 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 + WI I +L+LE LI+ +P +N L+ ++ L++ ++ + Sbjct: 62 DLEWIVVGSNIESLVLEINLIQRYKPKYNIMLKDDKYYPFLKITNEKYPRLLVVRKVQKD 121 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG + + +AA + + + L + CF + +C Sbjct: 122 GATYFGPYPDVKAANEVKRLLDRIFPFRKCGL-----HEKKVCFYFHIHQCLCPVVNHVD 176 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 + + ++ E L +KE +M + + +A + Sbjct: 177 PQVYKDMTQEVKEFL-----TGSDKKIVKELEGKMISASDNMEFEQAAEYRDVIKAIGTL 231 Query: 259 RTP 261 RT Sbjct: 232 RTK 234 >UniRef50_C2KQB5 Excinuclease ABC subunit C n=2 Tax=Mobiluncus mulieris RepID=C2KQB5_9ACTO Length = 702 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 98/258 (37%), Gaps = 17/258 (6%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLR 75 PE+ ++PT PGVY + + +Y+GK+ N+R+R+ S+ P A M+ Sbjct: 3 PENF-PKPAEIPTAPGVYRWRDAHGRV-IYVGKAKNLRNRLTSYFVDPAKLHPRTAKMVA 60 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + +SW+ E+ AL LE IKE P FN + ++ + + + Sbjct: 61 TAESVSWVVVGSEVEALTLEYTWIKEYDPKFNVMFKDDKSYPYFAVTLNQEFPRMGVLRS 120 Query: 135 DFSRAPNLFGLFANRRAALQA--LQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGA 192 R FG + A Q L + C + + GRAC + + RC+ Sbjct: 121 AHQRGVRYFGPYTAVWAIRQTSDLLETVFPVRTCTDGVFARARAAGRACLKGYIGRCSAP 180 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEM-TQYHIIQNWLWLGAVNSL 251 C G+ S EH + + + A L++ +M + + + L Sbjct: 181 CIGRISAAEHRELANRVCDFMSGHE-----AGLLRDLENQMWAESKAFRFEEAAKKRDQL 235 Query: 252 EEATT-LIRTPAGFDHDG 268 E L + D D Sbjct: 236 EALRKVLEKNAVVMDTDT 253 >UniRef50_Q3M542 UvrABC system protein C n=11 Tax=Cyanobacteria RepID=UVRC_ANAVT Length = 627 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 64/251 (25%), Positives = 104/251 (41%), Gaps = 26/251 (10%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLR 75 PE L + L+++P PGVY SD + +YIGKS +RSRV S+ R T A M + Sbjct: 14 PERLEARLSEIPPEPGVYFMRDGSDRI-IYIGKSRKLRSRVRSYFREGYNKTERIATMAK 72 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN--EKRVDVVYAKE 133 I +I T E AL LEA LIK+ QP FN L+ +++ + + E + ++ Sbjct: 73 LVTEIEFIVTDTEAEALALEANLIKQHQPYFNVLLKDDKKYPYVCITWSEDYPRIFITRK 132 Query: 134 VDFSR-APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGA 192 + +G + + + L+ L +PL + R C L RC G Sbjct: 133 RQLGKEKDKYYGPYTDSGLLREILRISKRIFALRQRP---QPLFKDRPCLNYDLGRCPGV 189 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C S EE+ +++ A+ + + E+ + + + E Sbjct: 190 CQQLISPEEYRKTVQKV-------------AMVFQGRTQELIDI-LSEQMEKAAEALNFE 235 Query: 253 EATTLIRTPAG 263 A + AG Sbjct: 236 VAARIRDQIAG 246 >UniRef50_B3E0M3 Excinuclease ABC subunit C n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E0M3_METI4 Length = 486 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 99/248 (39%), Gaps = 14/248 (5%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-------MLRQ 76 L+ + DLP +PGVYLF + + +Y+GK+V++ RV + ++ Sbjct: 5 LQEKIRDLPHKPGVYLFKDRFNRV-IYVGKAVDLHKRVSQYFHPSRRLRADRKLNALVEA 63 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD 135 + + + E A+LLE RLIKE +P +N R +++ ++++ + + Sbjct: 64 AVDLEYYVVHSEAEAVLLEGRLIKEFRPRYNVSFRDDKRFLLVKVDLSEPFPRFQVTRLK 123 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 FG FA+ A L + + L + + C +K C+ C Sbjct: 124 KQDNARYFGPFASSSALRTTLNLMKKKFGLRSCSALIPSEKDYKHCLDHIIKNCSAPCIA 183 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 K S E+ R++ + L + E +M + Q++ + +L EA Sbjct: 184 KISQAEYLERVKMACAFLEGK-----SKEMIDEIRLKMEEAAQAQDFEKAAELRNLLEAL 238 Query: 256 TLIRTPAG 263 PA Sbjct: 239 EETTRPAR 246 >UniRef50_D1PLG8 Excinuclease ABC subunit C n=3 Tax=Ruminococcaceae RepID=D1PLG8_9FIRM Length = 616 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 94/246 (38%), Gaps = 14/246 (5%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRRISWICT 85 LP PGVY+ +SDT+ +YIGK+ +++RV + R M+ + I Sbjct: 13 LPLLPGVYIIRDKSDTI-IYIGKAKRLKTRVSQYFREGVPHDAKVTQMIAHAFTFDVIVC 71 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGL 145 E AL+LEA IK P +N L+ ++ +++ + + A + G Sbjct: 72 QSEFEALVLEASQIKAHTPKYNILLKDDKGYSYVKVTKGPWPRISAALQKDDDGADYIGP 131 Query: 146 FANRRAALQALQTIADEQKLCYGLL-GLEPLSRGRACFRSALKRCAGACCGKESHEEHAL 204 F + A + ++ D L +GR C + + +C C GK S E + Sbjct: 132 FTSSFAVREMVEMAQDCFLLPRCNREFPRDFGKGRPCLNAHIGKCMAVCSGKISCEAYNE 191 Query: 205 RLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT--LIRTPA 262 ++ +L +R + +K+ +M ++ + +A Sbjct: 192 AVQGALRMIR-----YGKKDIVKQLREKMEAASERLDFETAALLRDQIQAIERVAAGQKV 246 Query: 263 GFDHDG 268 D D Sbjct: 247 VMDGDT 252 >UniRef50_UPI0001C3237F excinuclease ABC, C subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3237F Length = 647 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 94/255 (36%), Gaps = 11/255 (4%) Query: 12 FEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE- 70 A E + L LP +PGVYLF T+ +Y+GK+ +I+ RV SH P Sbjct: 19 SAVEAARERDQRLAEQRRALPDQPGVYLFRNAKSTV-IYVGKAKSIKKRVASHFSNPSTQ 77 Query: 71 --AAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVD 127 +L RI + + E ALL E IK+ +P FN RLR ++ + ++ ++ Sbjct: 78 MGRDLLPMIDRIESLVVSTEAEALLAEQNFIKQYKPRFNIRLRDDKSYPYIGISLDEDFP 137 Query: 128 VVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALK 187 VY R FG ++N + + L + G C +K Sbjct: 138 RVYFTRERHRRERAYFGPYSNAKRVRETLDLLGKIFLFRSCDGPTPGRRSGSPCLDYYIK 197 Query: 188 RCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGA 247 RC C + E + + ++ L + A+ M Q + Sbjct: 198 RCEAPCVDYVTKEHYRTSIDGVIDFLSGRYRAIEAAI-----EANMKDAAAEQRFEDAAR 252 Query: 248 VNS-LEEATTLIRTP 261 + L +L+ Sbjct: 253 ERNRLRSIRSLLERQ 267 >UniRef50_A8GXA7 Excinuclease ABC subunit C n=2 Tax=Rickettsia bellii RepID=A8GXA7_RICB8 Length = 356 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 13/253 (5%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQSRRI 80 ++ L +PT PG+YL + SD +YIGK+ N++ R+ + + A M+ Q + Sbjct: 6 IKKLLPLVPTLPGIYLMYN-SDKEIIYIGKAKNLKKRLNYYSKNNLRGRIARMVHQVYLV 64 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSRA 139 + T E A LLE +LIK+ QP FN LRR++ ++L ++ + +D S Sbjct: 65 EYKVTISESEAFLLETQLIKQHQPRFNILLRRDKSASYIKLRSDHDFPTLVKCYLDNSTG 124 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 LFG F + + + KL + R R C + +C C G S Sbjct: 125 NKLFGPFTSGHQIDLIITELQKIFKLRT-CSDSDFAFRKRPCLEYEIGKCFAPCTGNISK 183 Query: 200 EEHALRLRQSLERLRVVCWPWQGAVALKEQ----HPEMTQYHIIQNWLWLGAVNSLEEAT 255 E++A + Q + L G +ALK Q H + +I++ + L L + Sbjct: 184 EDYAELIEQINDFLSSNIEKLLGKLALKMQALSDHSHFEKAALIRDRINL---IKLSKLR 240 Query: 256 TLIRTPAGFDHDG 268 + D D Sbjct: 241 IGKQYEGIIDADV 253 >UniRef50_B9M422 UvrABC system protein C n=8 Tax=Desulfuromonadales RepID=UVRC_GEOSF Length = 622 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 8/195 (4%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQSRRISW 82 + P+ PGVY+ T+ LY+GK+ ++R R+ S+ ++ ++ + I + Sbjct: 7 IGHFPSSPGVYIMKDAEATV-LYVGKARDLRKRIRSYFAASGDSRYQIRFLMARVTDIQF 65 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAPN 141 I T E AL+LE LIK+ +P +N LR ++ +L+++ + Sbjct: 66 IVTDTEKEALILENTLIKKYRPKYNFNLRDDKTYFSLRMDMSSDFPRLSIIRKVTRDGAR 125 Query: 142 LFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEE 201 FG +++ A L+ + L + + R R C LK+C+ C GK S E+ Sbjct: 126 YFGPYSSASDARAVLKHLYKLFPLRHYPMET-CRRRNRPCLFYQLKQCSAPCHGKISRED 184 Query: 202 HALRLRQSLERLRVV 216 + + L Sbjct: 185 YMALAEGAALFLEGK 199 >UniRef50_B7J223 UvrABC system protein C n=22 Tax=Borrelia RepID=UVRC_BORBZ Length = 603 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 9/216 (4%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAAMLRQSRR 79 +L + LPT G Y E+ + LYIGK+ N+RSRV S+ + +++ + Sbjct: 7 NLFEKVIKLPTTSGCYKMLNENKKI-LYIGKAKNLRSRVKSYFLEKNSHKIKILMKNVKS 65 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRA 139 I I T E ALLLE LIK +P +N +L+ + +++ ++ ++ + Sbjct: 66 IEVITTNSEYEALLLECNLIKTHKPDYNVKLKDGKGYPMVRITHEKYPRIFKTRKIINDK 125 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 FG F N + Q L I K+ C + +C G C + Sbjct: 126 SEYFGPFTNVKKLDQVLDFINKTFKIRKC-----KKKSNAPCLYYHMGQCLGVCYKENLE 180 Query: 200 EEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQ 235 +E+ L ++ L + +K +H + Sbjct: 181 KEYQKELDKAKSILNGNISEISSQIDIKLKHAIQKE 216 >UniRef50_Q2FPC6 UvrABC system protein C n=16 Tax=Archaea RepID=UVRC_METHJ Length = 520 Score = 214 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 16/223 (7%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISWI 83 L +P PG Y F E+ T+ LY+GK+ N++ RV S+ + TP ++ R I I Sbjct: 6 LTTIPEEPGCYQFKDETGTI-LYVGKAKNLKKRVSSYFQKKSITPRIDILVSLIRDIDVI 64 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVV-YAKEVDFSRAPNL 142 T+ E+ AL+LE LIK+ QP +N L+ + +Q++ + A++ + L Sbjct: 65 VTSSEVEALILENNLIKKYQPKYNIDLKDAKSYAFIQISNDPFPRIGIARDRTVKKTGTL 124 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 +G F + Q L+ + L RAC RS L CA C GK S E+ Sbjct: 125 YGPFVSAAERDQILKFVKQTFHLRTCKKMT-----KRACLRSHLGTCAAPCTGKISEPEY 179 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWL 245 ++ + L+ + + EM + + + Sbjct: 180 QYLVKSADYLLKGKSQDL-----IYDLRKEMETFAAAEEYEKA 217 >UniRef50_Q6AKB8 UvrABC system protein C n=3 Tax=Deltaproteobacteria RepID=UVRC_DESPS Length = 607 Score = 214 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 92/242 (38%), Gaps = 13/242 (5%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLR 75 P L P +PGVYL + +Y+GK+ ++ R+ S+ R ML+ Sbjct: 2 PMFPEKILQSTPHKPGVYLMLDAKARV-IYVGKAKDLVKRLTSYTRHSSSEHNKTTVMLK 60 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + ++ I T E AL+LEA LIK+ +P +N LR ++ + + + V Sbjct: 61 KVEQVKTIITTTEKEALILEASLIKKHKPRYNIILRDDKNYPYIAVTVGEEWPRVMMVRR 120 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 FG +++ A L+ IA L G + R R C + +C C Sbjct: 121 KRRDNSRYFGPYSSATAMWATLKLIASLFPL-RNCRGEKLRPRTRPCLNRQIGKCLAPCT 179 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 G S + + + + L L+ L E +M Q N+ G A Sbjct: 180 GNVSRKIYMENVDKILLLLQGK-----SRDLLAELKRQMLQASERLNFEQAGQFRDQIRA 234 Query: 255 TT 256 Sbjct: 235 LK 236 >UniRef50_Q14NX3 Putative uvrc protein excinuclease abc subunit c n=1 Tax=Spiroplasma citri RepID=Q14NX3_SPICI Length = 593 Score = 214 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 9/196 (4%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSRRI 80 L+ + LP +PG YLF+ + LY+GK+ N+RSRV S+ ++++ R+ Sbjct: 7 LKEQVEILPAKPGCYLFYNNYHQV-LYVGKAKNLRSRVSSYFNKVYNYKTTRLVQEIVRL 65 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 I T E AL+LE LIK+ +P +N L ++ + + +++ + Sbjct: 66 ETIITKTEKEALILEHNLIKQYKPKYNILLNDDKHYPYIVITKEKDPQYLYVRNIHQKYA 125 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 +G F A + ++ + L L G+ C + +C+GAC S + Sbjct: 126 RYYGPFPEGSHAREIIKVLERLYPLRRCKGNL-----GKPCLYYHINQCSGACVKTVSPD 180 Query: 201 EHALRLRQSLERLRVV 216 + +++ + Sbjct: 181 YYIKMIKKVHSFFKGN 196 >UniRef50_A6NZD4 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZD4_9BACE Length = 616 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 90/246 (36%), Gaps = 15/246 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQ 76 + L+ + LP +PGVY+ + + + +Y+GK+ +++RV + T AM+ Q Sbjct: 4 DELKEKAHALPLKPGVYIMQDKHN-VVIYVGKAKALKNRVSQYFADLASHTEKTRAMVSQ 62 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD 135 I E AL+LE+ LIK QP +N L+ ++ ++L + Sbjct: 63 IDHFDVIVADSEFEALVLESSLIKRHQPHYNILLKDDKGYPYIRLTVNEDYPRFSLANKA 122 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKL--CYGLLGLEPLSRGRACFRSALKRCAGAC 193 FG + +R + + + KL C + + R C + C G C Sbjct: 123 ADDGARYFGPYGSRGSTQGIIDALRAALKLPSCNRRFP-RDIGKERPCLNYHMGLCDGYC 181 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 E + + Q++ L E EM Q + + Sbjct: 182 RFGMPQERYRDAIDQAIRLLEGQF-----KEVGDEIQAEMEQAAEELRFEKAAELRDRYR 236 Query: 254 ATTLIR 259 A L+ Sbjct: 237 AIELLG 242 >UniRef50_Q5GSR4 UvrABC system protein C n=10 Tax=Wolbachia RepID=UVRC_WOLTR Length = 606 Score = 213 bits (542), Expect = 6e-54, Method: Composition-based stats. Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 21/265 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQS 77 + ++ + P GVY G+ D + LY+GK+ N++SR+ ++LR + ML Q Sbjct: 8 QAIKKQIELSPQSCGVYQMIGDKDKV-LYVGKAKNLKSRLSNYLRYENLSERTKFMLSQV 66 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 ++ + T EI ALLLEARLIK +P +N + R + +++ + F Sbjct: 67 IKVEVLVTENEIDALLLEARLIKSLKPPYNIIFKDGRSYPYIVISKHNYPRIAQYRGKFK 126 Query: 138 RAP-NLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 + + +G F + A Q + ++ ++C S R C +KRC+ C Sbjct: 127 KGEFHYYGPFISVAAVKQTMLSLQKTFLLRVCSDQYF---ASTKRPCIEYQIKRCSAPCV 183 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 GK + +++ ++Q+ + L + K+ M + +N+ + Sbjct: 184 GKITKDDYCQSVKQTRDTLLGRNEKVK-----KQLSSTMEKCSKEENYELAAIYRDRLKF 238 Query: 255 TTLIRTPA-GF----DHDGYKILCK 274 I+ + F D D + I K Sbjct: 239 LEQIQMQSMDFSFEKDADFFGIARK 263 >UniRef50_A7HD93 UvrABC system protein C n=5 Tax=Bacteria RepID=UVRC_ANADF Length = 716 Score = 212 bits (541), Expect = 8e-54, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 93/243 (38%), Gaps = 16/243 (6%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPD--EAAMLRQSR-- 78 +LR L++LP PG YL + Y+GK+ ++RSRV S+ + A + Sbjct: 4 NLRKTLDELPAEPGCYLMKDRRGAVV-YVGKASSLRSRVRSYFDASRGDDRAFVALLDEL 62 Query: 79 --RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDV---VYAKE 133 + I T E A+LLE LIK +P FN RLR ++ L+L+E+ V Sbjct: 63 LGDVEVIVTRSEKEAVLLENELIKRHRPRFNIRLRDDKDFIVLRLDERHAFPRLEVRRAR 122 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 FG +++ + + L+ + +L R R C +KRC C Sbjct: 123 EPRRAGARYFGPYSSASSIRETLRVVNRHFQLRTCT-DHVFEHRKRPCILYQIKRCPAPC 181 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 E+ + ++E L ++ H M + + + + Sbjct: 182 VYDVPEAEYRQSVEDAIEFLEGRETEL-----VERLHGRMDEAADALRFEDAARLRDQLQ 236 Query: 254 ATT 256 A Sbjct: 237 AVE 239 >UniRef50_C1F4W9 UvrABC system protein C n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=UVRC_ACIC5 Length = 645 Score = 212 bits (541), Expect = 9e-54, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 18/239 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQ 76 L+ + LPT PGVYL+ + +Y+GK+ N+RSRV S+L +++R+ Sbjct: 1 MDLQEKIRTLPTGPGVYLYKNADGEV-IYVGKAKNLRSRVRSYLLEASQANAKTGSLMRE 59 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD 135 + + +I E AL LE LIK+++P FN LR ++ ++L R V+ Sbjct: 60 AVDLDYITVGNEHEALALENNLIKQRKPRFNVLLRDDKTYPYVKLTLGDRYPKVFVTRRL 119 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC- 194 +G F A + + I L + L RAC + +KRC G C Sbjct: 120 RKDGAAYYGPFFPGNLAYRIVDLIHRSFLLPSCKVDLSRYH-ARACLQYYIKRCLGPCVK 178 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPE--MTQYHIIQNWLWLGAVNSL 251 + E + +R + W +G A E+ E M + + + L Sbjct: 179 HLTTPEAYREAVRDA-------QWFLEGRGADLERSLEVRMQEAAAAEQFELAAKYRDL 230 >UniRef50_D1Y7G8 Excinuclease ABC, C subunit n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y7G8_9BACT Length = 575 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 101/240 (42%), Gaps = 14/240 (5%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQS 77 +R+ L LP +PGVYL H E+ + +Y+GK+ ++ RV S+ P +++ Sbjct: 9 RIRAILRTLPLKPGVYLMHDETGKV-IYVGKAKKLKRRVSSYFNHRDFAIPRLRKLVQTV 67 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 + IS+I T E A ++E+RLIK QP FN L+ + + + ++ V Sbjct: 68 QDISFIRTETESEAFIVESRLIKAIQPFFNVELKMGSRYPFIVVTAEKFPRVLVTHTRP- 126 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 + +FG + + A L I + + LE R C + +C G C GK Sbjct: 127 KTGRVFGPYTSAGAMRSMLNMIKNFFPARNCSMNLEKEKLARPCIMYDIGKCLGPCAGKC 186 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + +E+ + L L A + P M + + + + A + + L Sbjct: 187 TEKEYGETVDDILMLLSGQT-----ADLVARLRPRMER--LAKEMRFEEAAKARDTIRDL 239 >UniRef50_UPI0000E87CD9 excinuclease ABC, C subunit n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87CD9 Length = 580 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 94/250 (37%), Gaps = 18/250 (7%) Query: 40 FHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISWICTAGEIGALLLE 95 +++ + +YIGK+ +++ RVLS+ +P M+ I + T E AL+LE Sbjct: 1 MLNKAEDI-IYIGKAKDLKKRVLSYFNKTQPSPRTRLMVGSIASIEFTVTNTEAEALILE 59 Query: 96 ARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQA 155 +I+ P +N R ++ L + + + FG F N A Q+ Sbjct: 60 NNMIRSFMPRYNVIFRDDKSYPYLAITGDKFPRIRFHRGLQKIDTKYFGPFPNSNAVRQS 119 Query: 156 LQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLERL 213 +Q + + C + +R R C +KRC C G +E+ + Q+ L Sbjct: 120 IQLLQKVFMLRTCENSVF---NNRSRPCLEHQIKRCTAPCVGLIEEDEYGADVNQANLFL 176 Query: 214 RVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTP---AGFDHDGYK 270 G + K+ + + + N+ ++ +R + F + Sbjct: 177 DGKDSEVIGNLT-KKMNEQSEAF----NFERAAIFRDRIQSLRQVRLKQFVSDFSENDAD 231 Query: 271 ILCKPLLSGN 280 I+ SG Sbjct: 232 IIAFAEASGK 241 >UniRef50_A9EYQ9 Excinuclease ABC, subunit C n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EYQ9_SORC5 Length = 742 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 53/236 (22%), Positives = 91/236 (38%), Gaps = 14/236 (5%) Query: 32 PTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA------MLRQSRRISWICT 85 PT PG YLF ++ + Y+GK+ ++RSRV S+ + A + + + + T Sbjct: 22 PTTPGCYLFIDKAGAVV-YVGKAKSLRSRVRSYFQESGSDARYFIPILRKIVADLETVVT 80 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKEVDFSRAPNLFG 144 A E A +LE L+K+ +P FN +LR ++ L+L+ ++ ++ FG Sbjct: 81 ATEKEAAVLENELVKQHKPRFNVKLRDDKDFLCLKLDTQKAWPMLETVRRPAPDKARYFG 140 Query: 145 LFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHAL 204 + + +A + L + +L E SR R C + +KRC C E + Sbjct: 141 PYHSATSARRTLHLVNKHFQLRT-CSDTEMASRRRPCLQYQIKRCLAPCVMDVDRELYTE 199 Query: 205 RLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 +R L G E M + A +R Sbjct: 200 MVRSVALFLEGRHDELTG-----ELTTRMRDASRELEFERAAIYRDQLRAVEAVRE 250 >UniRef50_Q7V7L7 UvrABC system protein C n=43 Tax=Cyanobacteria RepID=UVRC_PROMM Length = 667 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 106/264 (40%), Gaps = 14/264 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQ 76 L L ++P PG YL D + LY+GKS +R+RV S+ R+ P M+RQ Sbjct: 32 NRLEQRLKEIPAEPGCYLMRDVEDRL-LYVGKSKCLRNRVRSYFRSSSDHGPRIRLMVRQ 90 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN---EKRVDVVYAKE 133 I +I T E +L+LE+ LIK QQP FN L+ +++ L + E + + Sbjct: 91 IAEIEFIVTDSEAESLVLESNLIKNQQPHFNVLLKDDKKYPYLCITWSEEYPRIFITRRR 150 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 ++ +G + + + L + L PL + R C ++ RC G C Sbjct: 151 RFRNKNDRFYGPYVDVGLLRRTLLLVKRSFPLRQRP---RPLHQDRTCLNYSIGRCPGVC 207 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAV-ALKEQHPEMTQYHIIQNWL-WLGAVNSL 251 K + +++ LR+ + + + E++ + Y N + + L Sbjct: 208 QQKITPQDYHQVLRKVAMVFQGRNQELKVLLEKQMERYSDRMDYESAANIRDQIKGLEQL 267 Query: 252 EEATTLIRTPAGFDHDGYKILCKP 275 E + + D I Sbjct: 268 TEGQKMSLPDSSVSRDVLAIASDH 291 >UniRef50_Q7UPD6 Excinuclease ABC subunit C n=5 Tax=Planctomycetaceae RepID=Q7UPD6_RHOBA Length = 474 Score = 209 bits (532), Expect = 9e-53, Method: Composition-based stats. Identities = 62/289 (21%), Positives = 116/289 (40%), Gaps = 23/289 (7%) Query: 17 IYEYPEHLRS---FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTP 68 + ++ + R + P PGVYL + + +Y+GK+ N+RSR S+ Sbjct: 35 LQDFSQGFRQANRKVKTFPQSPGVYLMKDSAG-VVIYVGKAKNLRSRASSYFLKAASEDA 93 Query: 69 DEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVD 127 A + I ++ T E+ ALL+E+RLIK+ QP NK L+ ++ L + + Sbjct: 94 RTADWIGDIADIDFVETESEVDALLMESRLIKDIQPRNNKELKDDKSFPYLMITTREEFP 153 Query: 128 VVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGL----EPLSRGRACFR 183 V S+ L+G F + A A+Q + K L + E R C Sbjct: 154 RVEVTREPPSKGVKLYGPFTSAGALRGAIQVMQRIFKFRTCSLDISESDERWQWFRPCLL 213 Query: 184 SALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWL 243 +++ +C C + S E++ R+ ++RL+ + + L+E EM ++ Sbjct: 214 ASINQCTAPCNFRISKEDY----RRDIKRLQTFLDGGKTKL-LREMRGEMKAASKALDFE 268 Query: 244 WLGAVNSLEEATTLIRTPAGFD----HDGYKILCKPLLSGNYEITELDP 288 + + D + + I + L+G ++ L Sbjct: 269 RAAVLRDEINMIERLEERGELDTHAQPEVFYIDPQKGLAGLKKVLGLSE 317 >UniRef50_D2MQ80 Excinuclease ABC, C subunit n=7 Tax=Bacteria RepID=D2MQ80_9FIRM Length = 591 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 98/254 (38%), Gaps = 12/254 (4%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAAMLRQSR 78 E++ + L +LP PG Y + + +Y+GK+ ++ +RV + ++ Sbjct: 4 EYIEAKLAELPHEPGSYQMKNKYGEI-IYVGKAKDLHNRVNQYFVGTHDFKTTKLVSNID 62 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS 137 +I TA E AL+LE LIK+ +P +N + + ++L EK ++ A++ Sbjct: 63 DFDFIVTASEKEALILEINLIKKYRPKYNIQFIDDSSYPYIKLTKEKYPRLLIARDTKKD 122 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 + FG F + AA + + + P + C L +C G C + Sbjct: 123 KKARYFGPFPDVTAAKNTCKILQSLYP--FRRCTTMP---KKLCLYYHLGQCLGPCEFEI 177 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQ-HPEMTQYHIIQNWLW-LGAVNSLEEAT 255 + + + L+ + + K E Y Q + L +++++ Sbjct: 178 NPKVYDDMCEGVQRFLKGDSKEVEENLYTKMMVAAENRLYEQAQEYKVMLESIHAIVRHQ 237 Query: 256 TLIRTPAGFDHDGY 269 I D D + Sbjct: 238 QNIEKDNRGDRDAF 251 >UniRef50_D0RRP8 Excinuclease ABC subunit C n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RRP8_9RICK Length = 612 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 96/226 (42%), Gaps = 12/226 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLRQS 77 E ++ PGVY E + + +Y+GK+ N+ +R+ ++ + M+ + Sbjct: 9 EIFKNKSKLCSNSPGVYQVFDEKNKI-IYVGKAKNLPNRLSNYSSSSTQPIRTERMIAST 67 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDF 136 RI I T E ALLLEA LIK+ +P +N L+ ++ +Q+ + + Sbjct: 68 NRIDTISTLNESEALLLEANLIKKNKPRYNVLLKDDKSFPYIQIRSSHDYPQITKFRGKH 127 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 + FG FA+ +A ++ + ++C R R C +KRC+G C Sbjct: 128 NDKDIYFGPFASIASANWTIKMLQKVFQIRVCDDNTFK---GRSRPCILYQIKRCSGPCT 184 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALK-EQHPEMTQYHII 239 G+ + E++ + + L Q ++ + E+ + + Sbjct: 185 GEITKSEYSKTVDECSSFLNGKSRDIQKKMSQEMEKESDRLNFEKA 230 >UniRef50_B0MPX2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPX2_9FIRM Length = 585 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 91/248 (36%), Gaps = 17/248 (6%) Query: 40 FHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRRISWICTAGEIGALLL 94 ++ + +Y+GK+ +++RV ++ ++ +I T E+ AL+L Sbjct: 1 MKDKTGRI-IYVGKAKALKNRVTTYFHALESHNAKTRKLVENIYDFDFIVTPSELDALVL 59 Query: 95 EARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQ 154 E LIK+ P +N L+ ++ +++ ++ + + G F + A Q Sbjct: 60 ECSLIKQYNPKYNILLKDDKGYNYIKITKEPYPRISYALNCNDKNAEYLGPFTSGFTAKQ 119 Query: 155 ALQTIAD--EQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLER 212 A+ + C+ + + R C +KRC G C GK +E+ + ++E Sbjct: 120 AVDEVNRIFMFPSCHKVFP-RDFRKERPCLNYHIKRCMGVCTGKIKQDEYNSLIHSAIEY 178 Query: 213 LRVVCWPWQGAVALKEQHPEM--TQYHIIQNWLWLGAVNSLEEATTLIRTPAGFDHDGYK 270 ++ G+ A E+ E ++ + + + F Y Sbjct: 179 MQ------NGSKASVERLTEQMYEASENLEFEKAAKLRDRINAIEKMKDGQDIFSDKTYD 232 Query: 271 ILCKPLLS 278 L Sbjct: 233 FDVVALAQ 240 >UniRef50_B8FTB6 Excinuclease ABC C subunit domain protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FTB6_DESHD Length = 376 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 18/255 (7%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSR 78 L+ L DLP +PGVYL + +Y+GK+ N+++RV + R P M+ + Sbjct: 7 LKEKLKDLPEQPGVYLMQDSLGNI-IYVGKAKNLKNRVSQYFYKQKDRDPKVEEMILRIA 65 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 + E+ ALL E RLIKE +P +N++++ +++ +++ ++ + + + Sbjct: 66 DWEYRIVDTELDALLEECRLIKEIKPHYNRQMKNHQKYVYIKIPDESFPRLDIVQEREAG 125 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 +G F++R A++ ++D L G C L C G C GK S Sbjct: 126 GGIYYGPFSSRHRVETAVEGLSDIF-LIRKCSAPGRSKGGNGCLYRQLGTCVGVCTGKVS 184 Query: 199 HEEHALRLR---QSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 EE+ RL Q++E A+KE M + N+ Sbjct: 185 SEEYRERLDGVCQAIEA--------GDKGAMKELSSRMARAVEGLNFEMAARYREYLLGL 236 Query: 256 TLIRTPAGFDHDGYK 270 I+ F Y+ Sbjct: 237 RYIQGRQKFLKGTYR 251 >UniRef50_B2S367 UvrABC system protein C n=4 Tax=Treponema RepID=UVRC_TREPS Length = 691 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 93/239 (38%), Gaps = 14/239 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSR 78 E LR P+ GVYL+ + +Y+GK+ ++R+R+ S+ R P ++ ++ Sbjct: 9 ETLRIQALSAPSTSGVYLWKDVHG-VVIYVGKAKSLRTRLTSYFRCRHDPKTRVLMSRAA 67 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 + ++ T E ALLLE LIK+ P +N L+ + L+L + ++ Sbjct: 68 ALEYLQTQHEYEALLLENTLIKKHTPRYNICLKDGKTYPLLKLTCEPFPRIFRTRQFCQD 127 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG F + + L+ I K+ R C LKRC CCG S Sbjct: 128 GARYFGPFPDVQILDSFLKLILRTYKIRTC---TTLRKRKNPCLYYHLKRCDAPCCGWVS 184 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + + + L VA E+ + ++ + A ++ + Sbjct: 185 PRTYQKDIHEITLLLEGNI---DATVARLEKRMKRA----VRQEAFEAAARIRDDIQAI 236 >UniRef50_C0QPW8 Excinuclease ABC subunit C n=5 Tax=Aquificales RepID=C0QPW8_PERMH Length = 580 Score = 207 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 63/266 (23%), Positives = 104/266 (39%), Gaps = 17/266 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQS 77 E L++ +++ P PGVYLF G+ +YIGK+ NI++R+ HL P E + +S Sbjct: 11 EDLKNLIDEAPQSPGVYLFKGKKGE-YIYIGKAKNIKNRLKGHLNQYRIDPKEKKIFDES 69 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 +I WI T + A +LE LIK+ +P +N RL+ L + + V Sbjct: 70 SKIEWIITKSDYEAFVLENELIKQYKPKYNVRLKSGSGYPMLVITDDEYPTVVISRKFGE 129 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG F R A I +L R CF L C+ C K Sbjct: 130 IEGEYFGPFLPARTARAMKDLIHKLFRLRTCDP---LPKRDIVCFDYHLGLCSAPCVNKI 186 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALK-EQHPEMTQYHII----QNWLWLGAVNSLE 252 S +++ ++ + L + + + E++ + L + + S + Sbjct: 187 SKKDYNFDVKAAKAFLSGDVKKFIYRLYDRLEEYKNKLNFEKASVVRDQILAMENLISKQ 246 Query: 253 EATTLIRTPAGF----DHDGYKILCK 274 E L A D Y I+ + Sbjct: 247 EVLGLPVNEADIFYFSGKDVYLIVVR 272 >UniRef50_D2RRA5 Excinuclease ABC, C subunit n=2 Tax=Halobacteriaceae RepID=D2RRA5_9EURY Length = 597 Score = 207 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 61/257 (23%), Positives = 93/257 (36%), Gaps = 23/257 (8%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL--RTPDEAAMLRQSRR 79 + +R LP PGVY F E LY+GK+V++RSRV S+ RT M+ ++ Sbjct: 4 DGVRERAKSLPREPGVYQFRAE--GTTLYVGKAVDLRSRVRSYADPRTARIRRMVDRADE 61 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRA 139 I T E ALLLEA LIK QP +N RL+ ++ +QL + + A Sbjct: 62 IEIAVTDTETQALLLEANLIKRHQPRYNVRLKDDKSYPMVQLTDHEAPRIEITRDPDGEA 121 Query: 140 -------------PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSAL 186 P +FG F N+ ++ + + + G + R R C + Sbjct: 122 QGASSASGGAASGPTVFGPFTNKGQVETVVKALRETYGV-RGCSDHKYSGRDRPCLDYEM 180 Query: 187 KRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLG 246 C C + E +A + + EM QN+ Sbjct: 181 GLCTAPCTREIDLESYAQDVTAVERFFEGETGILADPL-----RREMEAAAEDQNFERAA 235 Query: 247 AVNSLEEATTLIRTPAG 263 + E G Sbjct: 236 NLRDRLETVETFHGEGG 252 >UniRef50_B9XGZ6 Excinuclease ABC C subunit domain protein n=2 Tax=Verrucomicrobiales RepID=B9XGZ6_9BACT Length = 559 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 59/258 (22%), Positives = 104/258 (40%), Gaps = 17/258 (6%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-------AMLRQ 76 +RS LN+LP +PG+YL T+ +Y+GK+ ++R RV + + A+ Sbjct: 7 IRSKLNELPHKPGIYLMKDRFGTV-IYVGKARDLRKRVSQYFHPSRKMGWDLKFKALTEA 65 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD 135 + E ALLLE +LIKE P +N + +++ L++N + Sbjct: 66 IYDLDVHVVRSEPEALLLEGKLIKEFHPRYNISFKDDKRFLMLKVNLNDPIPRFTLTRFK 125 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRG-RACFRSALKRCAGACC 194 FG FA+ A L I + L G L P R + C LK C C Sbjct: 126 QDDGARYFGPFAHSSALKNTLTMIRRQFHL-RGCRPLTPNERDYKHCLYGNLKHCTAPCI 184 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS-LEE 253 G + E++ +++ + + L QG ++ EM + Q++ + + + Sbjct: 185 GNVTREQYLAQVQAACDFLSG-----QGEEMQEQLAEEMKKAAAAQDYERAAMLRDAISD 239 Query: 254 ATTLIRTPAGFDHDGYKI 271 + F+ Y + Sbjct: 240 LRQTTKKTVKFERLPYNL 257 >UniRef50_C3XEM6 Excinuclease ABC subunit C n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XEM6_9HELI Length = 563 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 19/206 (9%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---------DEAA 72 L+S L +P PG+Y ++ + D + LY+GK+ N++ RV S+ Sbjct: 3 NTLQSQLQKIPNEPGIYQYYDKDDKL-LYVGKAKNLKKRVKSYFTKECSPNPKNSLRIQH 61 Query: 73 MLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL--NEKRVDVVY 130 M+ Q I I A E AL+LE IK Q P +N LR ++ + + N+ Sbjct: 62 MVAQIAHIHTIIVANEHEALILENSFIKSQNPKYNILLRDDKTYPYITINLNDCYPRFSI 121 Query: 131 AKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCA 190 + + + FG + + A + LQ++ + + L + C + +C Sbjct: 122 TRRIIKHKDTLYFGPYP--KGAKEILQSLYELFPIVQQASCL---KGKKPCLYYQIGKCL 176 Query: 191 GACCGKES--HEEHALRLRQSLERLR 214 G C K+S E+ ++Q++ ++ Sbjct: 177 GVCSIKDSNTKAEYDSYIQQAIILMK 202 >UniRef50_C4K987 DNA polymerase III, epsilon subunit n=1 Tax=Thauera sp. MZ1T RepID=C4K987_THASP Length = 482 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 90/281 (32%), Positives = 132/281 (46%), Gaps = 23/281 (8%) Query: 16 AIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMP-------LYIGKSVNIRSRVLSHL--- 65 A + P L LP PG+YLFH + + P L++G++ ++R+RV H Sbjct: 184 APTQPPGLPEGMLEALPDAPGLYLFHAQPEPPPAGARDPALFVGRAQSLRARVREHFGAG 243 Query: 66 -RTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK 124 R +A + + +R+ WI TAGE+ L E L++ P +N+ AL+L + Sbjct: 244 ARKGRDAELAARVKRVEWIETAGELDTSLRENALLRALAPPYNRPQEPAEAAFALRLLPR 303 Query: 125 R-----VDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGR 179 R + V D + +L G+F NRR A L+ +A +LC LGLE S Sbjct: 304 RRRAPIYETVAIAGTDPADWHDLHGVFRNRREADNLLRELALLYRLCPRRLGLEGGSG-- 361 Query: 180 ACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKE---QHPEMTQY 236 C A +RCAG C +E+ EEH RL +L + V WPW G VA++E P Q Sbjct: 362 PCTAHAARRCAGVCARRETPEEHDARLAGALAGVGVKPWPWAGPVAVEEVRAHGPHRLQ- 420 Query: 237 HIIQNWLWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPLL 277 + W LG+ A L P FD D ++IL + L Sbjct: 421 -VFDRWCHLGSAQDEAGALALAAAPRAFDADVWRILARWLA 460 >UniRef50_C7RR73 DNA polymerase III, epsilon subunit n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RR73_9PROT Length = 484 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 94/287 (32%), Positives = 144/287 (50%), Gaps = 16/287 (5%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-DEAAMLRQSRR 79 P+ + ++DLP G Y F G L + ++ N+R +VL+H + A++R + R Sbjct: 194 PQIDAAVIDDLPEAAGAYAFLGADGRRLL-VRRTGNVRQQVLAHFAAANRDTALIRDTWR 252 Query: 80 ISWICTAGEIGALLLE---ARLIKEQQPLFNKRLRRNRQLCALQLNEK-----RVDVVYA 131 I W AGE+GA L E AR + L + +LC+ QL R +V++ Sbjct: 253 IEWRDAAGEVGARLHEIELARATATESGLAAEPGDAAGELCSWQLQRSAGGGFRPQLVFS 312 Query: 132 KEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAG 191 + DF+ A +LFG++ NRR AL+AL+ +AD Q+LC+ LGLE +RG AC K C G Sbjct: 313 ADRDFAVADDLFGVYPNRREALRALRRLADGQRLCHQQLGLEETARGEACSAYRQKNCRG 372 Query: 192 ACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHP--EMTQYHIIQNWLWLGAVN 249 AC GKE+ H RL +L + R+ WP++G +AL E+ H+I W +G Sbjct: 373 ACIGKEAAAVHGARLLTALAKFRLRAWPYRGPIALLERDDFGMREDIHLIDRWRHIGTAR 432 Query: 250 SLEEATTLIRTPAG----FDHDGYKILCKPLLSGNYEITELDPANDQ 292 E + FD + Y+IL + L +G I L + + Sbjct: 433 CEETLQAYLADGPHWHRRFDPEIYRILSRALQAGKVRIRPLPAVHRE 479 >UniRef50_D2R0D2 Excinuclease ABC C subunit domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R0D2_9PLAN Length = 493 Score = 204 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 101/250 (40%), Gaps = 16/250 (6%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-RTPD----EAAMLRQSRRI 80 + + + P PG+YL ++ + +Y+GK+ N+RSR S+ R A + + I Sbjct: 66 AKVREFPRTPGIYLMKDDAGRV-IYVGKAKNLRSRAGSYFLRGAKEEYRTAIWVDEICDI 124 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSRA 139 ++ E+ ALL+EARLIK+ QP NK L+ ++ L + + V R Sbjct: 125 DYVECESEVDALLMEARLIKDIQPKHNKELKDDKTFPYLMISTREDFPRVEVTRQPADRG 184 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEP----LSRGRACFRSALKRCAGACCG 195 LFG FA+ + A+Q + K L +E R C +++++C C Sbjct: 185 VKLFGPFASAGSLRGAVQVLQRIFKFRTCSLDIEDGDDRWRWFRPCLLASIQQCTAPCNL 244 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 + S +E+ + + + L LK+ EM + + + Sbjct: 245 RISKDEYRRDIDRLITFLEGGKTRL-----LKQLTLEMQAASKALQFEVAARLRDEIKML 299 Query: 256 TLIRTPAGFD 265 + D Sbjct: 300 ETLDRRGSID 309 >UniRef50_A9BGW2 UvrABC system protein C n=1 Tax=Petrotoga mobilis SJ95 RepID=UVRC_PETMO Length = 574 Score = 204 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 99/259 (38%), Gaps = 22/259 (8%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR------TPDEAAMLRQSR 78 RS LN++P +PGVY+F P+YIGK+ N+++RV S+ ML ++ Sbjct: 4 RSILNNIPKKPGVYIFKNNKGD-PIYIGKAKNLKNRVSSYFNKKNYIGNEKTYEMLEKAT 62 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 + +I T+ E A +LEA LI +P +N L+ R + + +++ + Sbjct: 63 NLDYIITSNENQAFILEANLIYIHKPKYNIMLKDTRVYPYILVTDEQFPKIKYIRTKKEE 122 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 +G +++ + ++ + K+ L + + CF L RC G C Sbjct: 123 KGKFYGPYSDVKFVKDVIEVLQSVYKIRSCDRDL--GRKSKPCFLYHLGRCYGPCYKDVD 180 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS-------- 250 + + + + L + + M Y I+N+ + Sbjct: 181 ETVYQESVEKVKKVLSGDIEEVKNYL-----QKAMMDYAKIKNYEKAAQMRDTLFKLENL 235 Query: 251 LEEATTLIRTPAGFDHDGY 269 EE + D Y Sbjct: 236 FEEVAVEYKNGKNLDIIMY 254 >UniRef50_C7N8N1 Excinuclease ABC, C subunit n=12 Tax=Fusobacteriaceae RepID=C7N8N1_LEPBD Length = 594 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 101/248 (40%), Gaps = 23/248 (9%) Query: 22 EHLRS--FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAML 74 E ++S D+PT PGVYL E + +Y+GK+ N+++RV S+ ++ Sbjct: 3 EEIKSPIKYKDIPTHPGVYLMKNERGKI-IYVGKAKNLQNRVKSYFMNINSHNQKTMELV 61 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKE- 133 + + I + E+ AL+LE LIK+ +P +N L+ + ++ +++ V Sbjct: 62 KNIKDIEFFICKSEVEALILENNLIKKNKPKYNILLKDEKTYPYIKFTKEKFPKVEIVRS 121 Query: 134 -VDFSRAPNLFGLFA-NRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAG 191 + FG + A++ L I + C + + C + +K C Sbjct: 122 TKKLNENAEYFGPYPMGIFFAMKTLLKIF-PMRDCNRSMD----KITKPCLKYYMKTCPA 176 Query: 192 ACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSL 251 C K+ +E++ ++ L+ ++ M ++ + A+N Sbjct: 177 PCKYKDIEDEYSTNVKNFKNFLKG-----HSDKVIEMLESRMKKFS--DEMEFERAINER 229 Query: 252 EEATTLIR 259 E+ L R Sbjct: 230 EKLAVLKR 237 >UniRef50_B9KXM0 DNA polymerase III, epsilon subunit n=2 Tax=Thermomicrobia (class) RepID=B9KXM0_THERP Length = 693 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 51/242 (21%), Positives = 93/242 (38%), Gaps = 15/242 (6%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQSRR 79 + L D P PGVYL + LY+GK+ N+R RV S+ P +L Sbjct: 283 QRLLADTPELPGVYLMRDALGRV-LYVGKARNLRQRVRSYFSQPLGYTRKMDGLLESVAE 341 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKEVDFSR 138 I + T E+ ALLLE++ ++ +P +N +LR + +++ R + Sbjct: 342 IETVVTGSELEALLLESQFVQRYKPPYNTQLRNHEAYPYVKVELGRPWPRLMLARQRDDD 401 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR-GRACFRSALKRCAGACCGKE 197 G F + AA ++ + L GR C + L RC G C G Sbjct: 402 DAVYVGPFRSTAAARSVVELLHQLLPLRTCHRSFRDARSYGRPCLQLTLGRCIGPCTGCV 461 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQ-NWLWLGAVNSLEEATT 256 + +E+ + +L L + E+ ++ + + ++ + L + Sbjct: 462 TPDEYRALVDCALRYLSGETS------VVVERAQQLLADAVERLDFERAARLRDLLRRSE 515 Query: 257 LI 258 + Sbjct: 516 EL 517 >UniRef50_A8FMV1 UvrABC system protein C n=22 Tax=Campylobacter RepID=UVRC_CAMJ8 Length = 600 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 54/274 (19%), Positives = 107/274 (39%), Gaps = 30/274 (10%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----------RTPDE 70 E+L + L LP GVY + + + LY+GK+ N+++RV S+ + Sbjct: 4 ENLENELKTLPNSAGVYQYFNQEGKL-LYVGKAKNLKNRVKSYFAFTPNLHANPRNSLRI 62 Query: 71 AAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN--EKRVDV 128 M+ ++ + +I T E AL+LE IK+ P +N LR ++ + ++ E+ Sbjct: 63 QKMIEETVHLEFITTNSEADALILENSFIKQLHPKYNILLRDDKTYPYIYVDFEEEFPRF 122 Query: 129 VYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKR 188 +++ FG F + A + L + L C + R Sbjct: 123 EITRKLVKKSKIKYFGPFF--KGARELLDALYLYYPLKQKASC------KSPCIFYQISR 174 Query: 189 CAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAV 248 C C + S E++ L +++ L ++ +K +M + QN + A Sbjct: 175 CLAPCDKRISREKYLEILDEAMHAL------LNPSILIKNLEKQML--VLAQNENYEEAA 226 Query: 249 NSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYE 282 ++ T+ + D K+ + + +E Sbjct: 227 KVRDQIVTIKDLEVKVEIDIAKLEDFEVFALAFE 260 >UniRef50_C7N5B1 Excinuclease ABC, C subunit n=6 Tax=Coriobacteriaceae RepID=C7N5B1_SLAHD Length = 666 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 99/260 (38%), Gaps = 36/260 (13%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQS 77 + ++ L +PT PGVYL+ + + +Y+GK+ +R+R+ ++ D+ A ++ Q Sbjct: 8 QDIKHQLASVPTLPGVYLWKNKDGEV-IYVGKAKQLRARMRQYVNFQDDRAKIPLLVDQI 66 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKEVDF 136 +I E AL+LE LI + P FN + N+ + L + + Sbjct: 67 DSFEYIVVENEHEALVLEKNLINQYAPFFNADFKDNKSYPFIALTKGDVFPAIKYTREKH 126 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLL----------------GLEPLSRGRA 180 + FG + + RAA Q + + LC + R Sbjct: 127 VASTRYFGPYTDGRAARQLVDIVRKVVPLCSSSCAEWRRLKKKLDNDDLTAFLSETGTRP 186 Query: 181 CFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQ 240 CF + + GACCG+ + E++ + + + L + ++E + Q Sbjct: 187 CFDAHVGLGPGACCGQITPEDYRRHVERVEKFLSGRRTEF-----IEE---------LTQ 232 Query: 241 NWLWLGAVNSLEEATTLIRT 260 + A E A L Sbjct: 233 EMMEAAADLDFERAARLKSR 252 >UniRef50_Q7VK73 UvrABC system protein C n=2 Tax=Helicobacter RepID=UVRC_HELHP Length = 621 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 64/282 (22%), Positives = 119/282 (42%), Gaps = 36/282 (12%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR------------TPDE 70 +L L DLPT+ G+Y F DT+ LY+GK+ N+++R+ S+L +P Sbjct: 10 NLLVHLADLPTQSGIYQFFDNEDTL-LYVGKAKNLKNRIKSYLSIENKHIVPKNNLSPRI 68 Query: 71 AAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE--KRVDV 128 A M+ Q RI + T E AL+LE LIK +P +N LR ++ + +++ Sbjct: 69 ALMVSQITRIHTLLTNNEQDALILENSLIKSLKPKYNILLRDDKTYPYIYIDKSLPYPRF 128 Query: 129 VYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKR 188 ++V S FG F + A + L ++ D L + +AC + + Sbjct: 129 ELTRQVLKSNQIQYFGPFVSG--ARELLDSLYDNLPLVQKKSC---VKGKKACIFHQIHK 183 Query: 189 CAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAV 248 C C K S + +A + Q + + + + + E H +Q Sbjct: 184 CPAPCENKVSIQTYAQTIAQGIALIEDK----KALLKILESKMHTLS-HNLQFEEAAIMR 238 Query: 249 NSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPAN 290 + +++ T + + + D ++SG+Y++ L + Sbjct: 239 DRIQKITQM-KNQSIID----------MMSGDYDVFVLQEQD 269 >UniRef50_C1DBV5 Probable DNA-directed DNA polymerase III n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DBV5_LARHH Length = 493 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 82/271 (30%), Positives = 125/271 (46%), Gaps = 17/271 (6%) Query: 19 EYPEHLRSFL-NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAM 73 E PE + + L + LP PGV+ T+ L++GK+ N+R+ VL + R EA + Sbjct: 186 ELPEGVGAGLVDHLPDVPGVFRLMAADGTV-LHVGKAANLRASVLRYFQPRVRNQKEARL 244 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQ-QPLFNKRLRRNRQLCALQLNEKRVDVVYAK 132 + + W T GE GA L E R++ + PL + R + + +L + Sbjct: 245 AARVASVVWDETLGEFGAALREVRILGQLPAPLAGGKGRADETALSWRLVADEQGYLGPV 304 Query: 133 EVDFSRA-----PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALK 187 V + A FG+F N R A + L T AD KLC LGLE GR C +L Sbjct: 305 PVPLAEALAGHAGRCFGVFRNPREAQRLLATFADSYKLCCKRLGLEQSRSGRPCSAHSLG 364 Query: 188 RCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQH--PEMTQYHIIQNWLWL 245 RC GAC G+ES + RL L R + WP+ A+A+ EQ + H+ +W +L Sbjct: 365 RCRGACLGRESAAQFNTRLESVLARHALPSWPFDDALAVVEQDVVTGRCERHLFADWRYL 424 Query: 246 GAVNSLEEATTLIRTPAGFDHDGYKILCKPL 276 G+ + E + + D +K+L + Sbjct: 425 GSFTADGE---WLEAGDAVNVDLFKLLQATI 452 >UniRef50_B3QSB2 DNA polymerase III, epsilon subunit n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QSB2_CHLT3 Length = 578 Score = 200 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 65/238 (27%), Positives = 100/238 (42%), Gaps = 21/238 (8%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSRRI 80 + LN PT+ GVYL D + LYIGKS N++SRV S+ R+ + R+I Sbjct: 223 TVLNKFPTKSGVYLMKSAKDEV-LYIGKSKNLKSRVSSYFNQNIDRSEKVVELTHHVRKI 281 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 + T E+ ALLLE++LIK+ +P FN L+R R L +E + Sbjct: 282 DYTLTGSELEALLLESKLIKQYKPRFNTLLKRYRSYPFLTFSEHEFPKLEIALDVEDGDK 341 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG F + ++ + K+ SR R C L RC C + Sbjct: 342 EYFGPFPSLELLQHVVEILERYFKV--RKCSDHDFSRARFCIYFDLDRCFAPCKH---PK 396 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 + + L+++R L ++PE+ +I+ L + N EEA L Sbjct: 397 HYKEAYIKELDQIRAF---------LSGKNPEIINV-MIREMKALASENLFEEAADLK 444 >UniRef50_D2ML33 Excinuclease ABC, C subunit n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2ML33_9BACT Length = 583 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 6/181 (3%) Query: 40 FHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQSRRISWICTAGEIGALLLE 95 G P+YIGK+ N+R+RV+S+ + + ++R+ I ++ T GE AL +E Sbjct: 1 MKGP-GGTPVYIGKAKNLRARVMSYFQRGSDRGQIPYLVREVDSIDYVVTEGESEALFIE 59 Query: 96 ARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAPNLFGLFANRRAALQ 154 LIK +P +N RL+ ++ +L+L+ +R + FG FA+ + Sbjct: 60 NSLIKRHKPKYNIRLKDDKTFSSLRLSVGERFPRLSRTRRIRDDGALYFGPFASGKFLKS 119 Query: 155 ALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLR 214 + + L R C +K C+G C GK S E++ + Q+ LR Sbjct: 120 TVNLVHRLFPLRDCTQSKFERHSTRPCLNYFMKLCSGPCAGKISEEDYGELVSQATSFLR 179 Query: 215 V 215 Sbjct: 180 G 180 >UniRef50_Q8REL0 UvrABC system protein C n=10 Tax=Bacteria RepID=UVRC_FUSNN Length = 589 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 98/241 (40%), Gaps = 19/241 (7%) Query: 30 DLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISWICT 85 D+P GVYL + +Y+GK+ N+++RV S+ + +++ I + T Sbjct: 7 DIPESSGVYLMK--KNNKVIYVGKAKNLKNRVSSYFNRVHESEKTNELVKNIEDIEFFLT 64 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVD---VVYAKEVDFSRAPNL 142 EI ALLLE LIK+ P +N L+ + ++++++ +V + ++ Sbjct: 65 NTEIDALLLENNLIKKYSPKYNILLKDEKTYPFIKISKEDFSSIKIVRTTKALDIKSGEY 124 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 FG + A + + K+ ++ + R C + +K C G C K+ EE+ Sbjct: 125 FGPYP--YGAWRLKNILMKLFKIRDCNRDMKK-TSPRPCLKYYMKSCTGPCVYKDIKEEY 181 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPA 262 + + L+ + E M + Q+ + ++ E+ L + Sbjct: 182 NKDVENLKQVLKGNTSKL-----INELTALMNKAS--QDMDFEKSIIYREQIKELKSIAS 234 Query: 263 G 263 Sbjct: 235 S 235 >UniRef50_D1N623 Excinuclease ABC, C subunit n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N623_9BACT Length = 505 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 95/230 (41%), Gaps = 14/230 (6%) Query: 30 DLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-------TPDEAAMLRQSRRISW 82 ++P +PGVY++ + +Y+GK+ N+R R+ S+ + +++ S+ Sbjct: 30 EIPAKPGVYVYRDRFGKV-IYVGKAANLRRRMSSYFQPSRVVRADAKLRSLINSISDWSY 88 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAPN 141 E AL+LE+RLIK+ P +N +R +++ L+++ ++ + + + Sbjct: 89 EVVRTEDEALILESRLIKDFAPHYNVLMRDDKRYLLLKIDWHEKFPTLKLARLKKNDGAQ 148 Query: 142 LFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEE 201 FG F A L+ + L + C + +K C C G + EE Sbjct: 149 YFGPFPKGGALKMTLEFLLAHFGLRACRDSEPDEETRKRCLKRIVKDCCAPCTGAVTPEE 208 Query: 202 HALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSL 251 + R+ Q++ L A+ +MT + Q + + + Sbjct: 209 YRERVEQAVAVLNGDIAELTAAI-----REKMTAAAMEQRFEKAAHLRDV 253 >UniRef50_A9A4M1 Excinuclease ABC, C subunit n=2 Tax=Thaumarchaeota RepID=A9A4M1_NITMS Length = 528 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 48/228 (21%), Positives = 96/228 (42%), Gaps = 16/228 (7%) Query: 30 DLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAAMLRQSRRISWICTA 86 +PT PG+YL T+ +YIGK+ N++ RV S+ + +++ I ++ T Sbjct: 9 TIPTDPGIYLMKDSDGTI-IYIGKAKNLKKRVKSYFLKNQNYKTQKLVQNISDIEFVLTD 67 Query: 87 GEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVV----YAKEVDFSRAPNL 142 E A LLE+ +IK+ +P FN L+ ++ L++++++ + ++ F Sbjct: 68 NESEAFLLESNMIKKYRPRFNIELKDQQRYTYLRISDEKYPRLLVARRTRDGKFLGKGKT 127 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 FG F + L + + ++ + P + C L C G C ++ + + Sbjct: 128 FGPFTQGSSKLLTIGALRKAFQI--RICKTLP---KKVCLEYHLGNCEGPCEFNDAQDRY 182 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS 250 + E L+ Q + K+ EM Q +Q + + Sbjct: 183 PKHVAALEEVLKGKN---QTKIFTKKLEEEMHQAAELQQFERAKDIRD 227 >UniRef50_D1B5F2 Excinuclease ABC, C subunit n=2 Tax=Synergistaceae RepID=D1B5F2_THEAS Length = 479 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 15/248 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQ 76 E L + LP RPGVY+ + +Y+GK+ +R RV+S+ R +P ++ Sbjct: 4 EALMKHVRSLPERPGVYIMRDRDGNV-IYVGKAKALRRRVMSYFRHGNFASPRLRKLVET 62 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 IS + TA E AL+LEARLI++ +P FN L+ + + +++ ++R V V Sbjct: 63 VHDISVMRTATEAEALILEARLIRQLKPFFNVELKMSERYPYIRVTQERFPRVMVTRV-- 120 Query: 137 SRAPNLF-GLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 + LF G + R + L+ + L +EP R C A+ +C C G Sbjct: 121 RKGEGLFIGPYVKVRELRELLRLLDRFFPLRKCSFPIEPPYDRRPCIYHAIGKCLAPCAG 180 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQ-NWLWLGAVNSLEEA 254 + + +++ L+ +GA ++ M + + + + A Sbjct: 181 LCDEGTYRRMVAEAVMLLQG-----RGADLVERLKRRMEDAAYNRLAFEEAAHIRDMIRA 235 Query: 255 TTLIRTPA 262 + A Sbjct: 236 IWRVGRQA 243 >UniRef50_C5RNQ3 Excinuclease ABC C subunit domain protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RNQ3_CLOCL Length = 364 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 17/237 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQ 76 +L+ + LP+ PGVYL + + +YIGKS N+++RV S+ + +++ Sbjct: 1 MNLKEKIKGLPSVPGVYLMKDSLENI-IYIGKSKNLKNRVSSYFQNSKNHSSKVIRLVQN 59 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ--LNEKRVDVVYAKEV 134 + +I T E A +LE +LIKE +P +N+ ++ +Q L + +D+ E Sbjct: 60 LKDFDYIITDTEFEAFILECKLIKEIKPPYNRLMKSPMSYSYIQVALGDNCLDISLKSEA 119 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 FG + +R + + I + K+ +G AC +LK C G C Sbjct: 120 VKDDNCIYFGPYTSRNIVERGILGIKNHLKIA----CTNNSRKGSACINYSLKLCMGMCM 175 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSL 251 K S ++ + L+ L ++E + M ++ Sbjct: 176 NKVSQNQYIEIYNKILQLL-----NGSDKSIIEEMNLVMNNAAESFDFETAAKYRDY 227 >UniRef50_Q2SSM4 UvrABC system protein C n=5 Tax=Mollicutes RepID=UVRC_MYCCT Length = 584 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 98/269 (36%), Gaps = 23/269 (8%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQSR 78 +L+ ++ L +PG YLF + + + +Y+GK+ N++ RV ++ ++R+ Sbjct: 1 MNLKEQVDLLTNKPGCYLFLNKDNEV-IYVGKAKNLKKRVSTYFNKAYNIKTTRLIREIT 59 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 + + E +LLLE LIK+ +P +N L ++ + + ++ + + Sbjct: 60 HLKYFIVDNEKESLLLEKNLIKKYRPKYNVLLNDDKTYPYIIITNQKDPMYKYVRKYEKK 119 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 A +G A L T+ L L + C L +C+GAC Sbjct: 120 ALRNYGPLPIGSNARSILLTLQRLFPLRMCKGDL-----KKPCLYYHLNQCSGACFKTVD 174 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 + +++Q + + + +++ E+A + Sbjct: 175 SSYYEYQIKQVDKFFKGEINQVKQT--------------LVKQMQKASDNLQFEQAKRIK 220 Query: 259 RTPAGFDHDGYKILCKPLLSGNYEITELD 287 D K + + N ++ + Sbjct: 221 DQITSLDFITAKQNVDIVTNKNIDVVNYE 249 >UniRef50_C8WI08 Excinuclease ABC, C subunit n=3 Tax=Coriobacteriaceae RepID=C8WI08_EGGLE Length = 737 Score = 197 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 34/258 (13%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQS 77 E ++ LN +PT PGVYL+ +S + +Y+GK+ +R+R+ ++ DE A ++ Q Sbjct: 60 ERIKEELNSVPTLPGVYLWKDKSGQV-IYVGKAKQLRARMRQYVNFQDERAKIPLLVDQI 118 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKEVDF 136 +I E +L+LE LI + P FN + ++ + L + + Sbjct: 119 DSFDYIVVENEHESLVLEKNLINQHAPFFNADFKDDKSYPFIALTKGDVFPAIKYTREKH 178 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLC----------YGLLGLEPL----SRGRACF 182 FG + + RAA + LC L +PL R CF Sbjct: 179 RADTKYFGPYTDSRAARDMVDIARRVVPLCATSCADWRQLKRRLEKDPLALMSHDARPCF 238 Query: 183 RSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNW 242 + + GACCG + E++ + +++ L + + E EM + Sbjct: 239 DAHVGLGPGACCGGITPEDYRVHVKRIERFLSGQHREF-----VDELQAEMQE------- 286 Query: 243 LWLGAVNSLEEATTLIRT 260 A E A + Sbjct: 287 --AAAELDFERAARIKAR 302 >UniRef50_A1SLE5 DNA polymerase III, epsilon subunit n=5 Tax=Actinomycetales RepID=A1SLE5_NOCSJ Length = 601 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 103/263 (39%), Gaps = 22/263 (8%) Query: 9 RLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP 68 L+ ++ + R LP PGVYLF E + LY+G S ++R+RV S+ Sbjct: 206 ELQTFSSRVSSAQRRKRHLAEGLPHAPGVYLFRDEQAQV-LYVGTSRDLRTRVRSYFTAS 264 Query: 69 DEA----AMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK 124 + M+ + + I A + A + E RLI E +P +N+R R ++ ++L + Sbjct: 265 ETRSRMGEMVGIATVVDAIECATALEAEVRELRLIAEHKPKYNRRSRNPSKVHFIKLTRE 324 Query: 125 RVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGR-AC 181 + + G F++++ A + L + + + C L +P + GR C Sbjct: 325 PWPRLSLVRRVLDDDADYLGPFSSKKTAEKCLAALHETFPVRQCTDRLPGDPAAAGRAPC 384 Query: 182 FRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQN 241 + + RC C G H +A + Q + L + P+ I Sbjct: 385 VLAEMGRCLAPCDGSVDHATYAAVVHQLRDTL--------------LRRPDEVVETINAK 430 Query: 242 WLWLGAVNSLEEATTLIRTPAGF 264 L A EEA A F Sbjct: 431 MGALAADERFEEAGVHRDRLAAF 453 >UniRef50_A0LZ46 Exonuclease family protein n=14 Tax=Bacteroidetes RepID=A0LZ46_GRAFK Length = 457 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 115/263 (43%), Gaps = 34/263 (12%) Query: 27 FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT--PDEAAMLRQSRRISWIC 84 L +LP+ GVY FH E+ + +Y+GKS NIR RV H P M ++ +S+ Sbjct: 189 ILEELPSETGVYYFHDENSEI-IYVGKSRNIRKRVNQHFTNDNPKSREMQKKVASVSYEL 247 Query: 85 TAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFG 144 T E+ ALL E + IKE +P +N+ L+R+ AL + K ++ Sbjct: 248 TGNELIALLKENQEIKELKPRYNRALKRDIFSHALYQFTDDDGYINLKIGRANKTKKNIT 307 Query: 145 LFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHAL 204 F++ R+A +L+ E +LC L GL + CF +K C GAC G+E + Sbjct: 308 TFSSLRSAKNSLEKWVTEFELCERLAGLHGGTGN--CFAYTIKSCHGACIGEEPPISYNE 365 Query: 205 RLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPAGF 264 R+ + ++R + QN L +G ++E + L+ F Sbjct: 366 RVNKLIDR----------------------HSYNNQNMLLIGRGREVDEKSALLIEDGDF 403 Query: 265 DHDGYKILCKPLLSGNYEITELD 287 GY + N++I LD Sbjct: 404 KGTGY-------FNLNHQINNLD 419 >UniRef50_A5KSN0 Excinuclease ABC, C subunit domain protein n=2 Tax=candidate division TM7 RepID=A5KSN0_9BACT Length = 440 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 92/247 (37%), Gaps = 17/247 (6%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQSR 78 L + L LP PGVY + +Y+GK+ +++RV + + A++ + Sbjct: 8 LEAKLKTLPRSPGVYFHKDARGKI-IYVGKAAILKNRVRQYFQKNRPHDIKTEALVAEIA 66 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS 137 W EI AL LE+ +IK +P +N L ++ +++N + V Sbjct: 67 DTDWTTVETEIDALFLESEMIKRYKPRYNVLLCDDKSQLFVRINMQDVYPYVSFTRWPQD 126 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 + +G + N A +AL+ + Y P R C + L C G K Sbjct: 127 DSAEYYGPYYNGWAVKKALRYLRRAFP--YSTHETMP---KRVCLQYHLGLCPGVEEQKI 181 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 S ++ + LR+ + L+ +++ EM +++ + Sbjct: 182 SSADYKVTLRKLIRYLKGER-----KALVRDIEQEMKTAAARKDYELAAKKRNQLRDLKE 236 Query: 258 IRTPAGF 264 + F Sbjct: 237 LGRQVIF 243 >UniRef50_B4U9X0 UvrABC system protein C n=3 Tax=Aquificaceae RepID=UVRC_HYDS0 Length = 565 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 15/220 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQS 77 + + + P PGVY+F + +YIGK++NI+ R+L HL ++ EA + S Sbjct: 1 MDIVALIEKAPEEPGVYIFKNQKH--YIYIGKAINIKKRLLQHLKEREQSKKEANIFNHS 58 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 + + WI T E ALLLE LI+ +P +N L+ + L + V D S Sbjct: 59 KELEWIVTRNEYEALLLEMDLIRTHKPKYNVLLKHGSGYPVILLTDDEYPTVKITR-DTS 117 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG F N AL+ + I +L E R C L C+G C Sbjct: 118 EKGEAFGPFLNINKALKIKKLIHATFRLRTC---EEMPKRPTPCMDYHLGLCSGPCANLI 174 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYH 237 S E++A+ ++ + L L + ++ QY Sbjct: 175 SKEDYAISVKSAKAFLSGNV-----KDVLPTLYEKIEQYA 209 >UniRef50_A6M201 Excinuclease ABC, C subunit domain protein n=5 Tax=Clostridium RepID=A6M201_CLOB8 Length = 366 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 17/219 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQ 76 L+ + LP+ PGVYL + + +Y+GKS N++SRV S+ +P +++ Sbjct: 3 MDLKEKVKKLPSSPGVYLMKDSLNNV-IYVGKSKNLKSRVGSYFINSKSHSPKILKLVQN 61 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL--NEKRVDVVYAKEV 134 + + T E A LLE LIK+ +P +N+ ++ + +++ NEK ++ + E Sbjct: 62 LKDFEYKITDTEFEAFLLECELIKKIKPAYNRLMKNPKSYSYIKIVLNEKYPNIEISHES 121 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 + + FG ++ + A + L I + C + + +CF +L C G C Sbjct: 122 NETDGNIYFGPYSRKNIAEKGLYGIKEY---CKIQCSI-NQRKTSSCFNYSLGLCIGMCL 177 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEM 233 EE+ L + + L + L+E M Sbjct: 178 DTTPREEYLNILNKIINLL-----NGNDKIILQEMEHIM 211 >UniRef50_A7HJI0 UvrABC system protein C n=3 Tax=Thermotogaceae RepID=UVRC_FERNB Length = 563 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 43/221 (19%), Positives = 88/221 (39%), Gaps = 8/221 (3%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP--DEAAMLRQSRRISWI 83 L +P + GVY+F +YIGK+ ++ R+ SH + ++ ++ + I Sbjct: 5 KILEKIPNKSGVYIFK--KGEEYIYIGKAKELKKRLTSHFKAKDGKSKLIVEEADDLQVI 62 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLF 143 E AL+LEA +I + +P +N L+ + ++++ + + + Sbjct: 63 LLDNEKEALILEANMIYKYKPKYNAMLKDTQVYPYIRISNDEIPYLEIVRNRKGEG-EFY 121 Query: 144 GLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHA 203 G F N Q + + K + + + C L C+G C +ES E++ Sbjct: 122 GPFTNVYFTRQLFEVLRKVYK--FRTCKRDITKLKKPCMDYHLGLCSGVCINEESPEDYK 179 Query: 204 LRLRQSLERLRVVCWPWQGAVALK-EQHPEMTQYHIIQNWL 243 ++ + L+ + LK EQH + + + Sbjct: 180 KKINEVKNVLKGKFSNVISFIKLKMEQHARLLDFENAAKYR 220 >UniRef50_Q2NJ78 UvrABC system protein C n=3 Tax=Candidatus Phytoplasma RepID=UVRC_AYWBP Length = 589 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 13/225 (5%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQSRRI 80 L + LP PG YLF DT+ +Y+GK+ N++ RV S+ A ++ +++ Sbjct: 4 LLEKIKTLPPNPGCYLFKNTKDTI-IYVGKAKNLKKRVQSYFTKRNNLKTAMLIEETQDF 62 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKE-VDFSRA 139 +I T E AL+LEA LIK P +N +L ++ +++ +++ + Sbjct: 63 FYIITNNEQEALILEANLIKTHTPKYNFKLLDDKTYPYIEITKEKHPQLKISRFKQIPPG 122 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 +FG + N ++ + L+ + L L + + C + +C GAC GK Sbjct: 123 KIIFGPYPNLKSTKETLKLLHLLYPLRRCQL-----ASKKPCLHFHINQCLGACAGK--T 175 Query: 200 EEHALRLRQSLERLRVVCWPWQGAV-ALKEQHPEMTQYHIIQNWL 243 + + + L+ + L ++ E Y Q + Sbjct: 176 INYKPNIDAITKFLKGNIKDILKKLHHLMQKASEKMFYEKAQEYR 220 >UniRef50_A9DMS8 DNA polymerase III, epsilon subunit n=1 Tax=Kordia algicida OT-1 RepID=A9DMS8_9FLAO Length = 457 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 116/273 (42%), Gaps = 15/273 (5%) Query: 20 YPEHLRSFL-NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL--RTPDEAAMLRQ 76 P HL S + +DLP +PG+Y F + + +Y+GK+ NI+ RVL H ++ E + R+ Sbjct: 185 LPPHLPSKIFDDLPAKPGIYYFKDKKGKI-IYVGKAKNIQKRVLGHFYNKSKKELDLCRE 243 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 + I + + E+ ALL+E IK P +N +R + A+ R V + D Sbjct: 244 TADIDYELSGSELIALLMEDAAIKHHYPRYNVASKRTPKRFAIFEYADRRGVRHLAINDA 303 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 + +F N R L+ + + LC L+ + C ++ C G C + Sbjct: 304 KIIQDPLIVFYNIRDCRTYLERLCMQFDLCPKYCHLQENVKE--CSHFMIQSCQGICKSE 361 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 E+ E + R++Q++ + + K ++ + +++N L+LG + Sbjct: 362 EAIETYNERVQQAIAHSKESSQNV--VIKQKGRNTNEEAFVMVKNGLYLGYGFIDHDLQI 419 Query: 257 LIRTPAGFDH-------DGYKILCKPLLSGNYE 282 D +IL K LL N + Sbjct: 420 SHSDKLEHHLIKQKDNVDVQRILRKVLLDVNVK 452 >UniRef50_P47448 UvrABC system protein C n=2 Tax=Mycoplasma RepID=UVRC_MYCGE Length = 597 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 61/256 (23%), Positives = 107/256 (41%), Gaps = 16/256 (6%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQSRR 79 +L+ L P +PG YL+ + + LY+GK+ NI +RV + + + Q Sbjct: 4 NLKQKLKTAPKKPGCYLWKDSNGKV-LYVGKASNIFNRVHQYFQKNNPYKTQLLSSQISD 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRA 139 + + E AL LEA+LI + QP FN L++N + + + + + Sbjct: 63 VDFFILKDENDALNLEAKLINQYQPRFNLVLKQNNGYLYFYITKAKKPTLELARKYQIKT 122 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 FG FA+ + L+ I D + L P + CF + C G C ++ Sbjct: 123 TKCFGPFASSKFK---LREIHDLLLKLFPLRKCAPHQKNHPCFYFQMGLCMGQCMQTDTK 179 Query: 200 EEHAL---RLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWL-GAVNSLEEA- 254 E++ + Q VV + A +++ + ++ Q +L L AV L + Sbjct: 180 EKYQQVISNIEQFFNDPSVVINYLKAA---EKKASDNQEFEKAQQFLTLQKAVLELTKTH 236 Query: 255 -TTLIRTPAGFDHDGY 269 TT+I+ + D GY Sbjct: 237 HTTIIKQKSSHDFIGY 252 >UniRef50_Q2GJJ1 UvrABC system protein C n=6 Tax=Anaplasma RepID=UVRC_ANAPZ Length = 614 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 13/236 (5%) Query: 35 PGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISWICTAGEIG 90 PGVY G D + LY+GK+ +++ R+ S+L + + M++Q R+ T E Sbjct: 27 PGVYKMFGTEDRL-LYVGKAKDLKKRLSSYLSINRMSVNVYTMVKQIVRLEITVTENETE 85 Query: 91 ALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS--RAPNLFGLFAN 148 ALLLEA+LIK +P +N +R ++ + ++ + + S R L+G F + Sbjct: 86 ALLLEAKLIKSLKPKYNIIMRDDKFYPYILFSKHKYPRIVLHREKRSEGRYTGLYGPFLS 145 Query: 149 RRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQ 208 + TI L +R R C +K C+ C K + E++A ++ Sbjct: 146 SVMTRHIIATIKKAF-LLRSCPDNFFATRARPCIEYEIKNCSAPCMQKITEEDYAKAVQM 204 Query: 209 SLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPAGF 264 + + L Q E M ++ Q++ A ++ GF Sbjct: 205 AHKAL-----TGQSKEIQCELFEMMCRFSNNQDYESAIVCRDRLHALKSMKECMGF 255 >UniRef50_A8F4P7 UvrABC system protein C n=6 Tax=Thermotogaceae RepID=UVRC_THELT Length = 558 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 95/233 (40%), Gaps = 14/233 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR------TPDEAAMLR 75 L P PGVY+F+G++ +Y+GK+ +R+R+LS+ + A++ Sbjct: 1 MDLLHKAKLAPLLPGVYIFYGKN-KEYIYVGKAKRLRNRLLSYFNRSNGKYSKKIQAIVN 59 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVD 135 ++ + +I + E ALLLEA LI +P +N L+ +++ ++ V + Sbjct: 60 EAEELDYIVVSNEREALLLEANLIFNHKPKYNVMLKDAEFYPYIEITKELFPAVQIVRIR 119 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 S FG + + + + + + + + + C + RCA C G Sbjct: 120 -STGGEYFGPYTDVKFVKDLIDCLQQVYQ--FRTCRRDMSKSTKPCMEFYMHRCAAPCTG 176 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKE---QHPEMTQYHIIQNWLWL 245 + + Q L R+ + + ++E +H +M + + L Sbjct: 177 DLEPDSYINSSIQPLRRV-LNGDISETLDLIEEKMKKHAKMMDFENAAKYRDL 228 >UniRef50_B5Y9S9 Excinuclease ABC, C subunit n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9S9_COPPD Length = 595 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 16/209 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQSR 78 LR + P PGVYLF+G S + +Y+GK+ ++ +R+ + R+ E ++ + Sbjct: 1 MTLRESIEQAPHSPGVYLFYGNSGQV-IYVGKASDLHNRLADYARSQPGQKEHLIMSNAS 59 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV----DVVYAKEV 134 ++SWI A E +L LE LIK+ P +N L+ + L+++ + ++V K+ Sbjct: 60 KVSWIIVANERQSLELEETLIKKYAPPYNVLLKDGKGYSYLRIDLSQEYPAVEIVRIKQR 119 Query: 135 DFSRAPNLFGLFANRR------AALQALQTIADEQKLCYGLLGLEPL--SRGRACFRSAL 186 LFG F R L+ + + +G+ + R R C + Sbjct: 120 KPKPGQLLFGPFVPLRVPDMPGKVRGDLKNLIQIAEEVFGIRSCKGPLKRRMRPCVYYEI 179 Query: 187 KRCAGACCGKESHEEHALRLRQSLERLRV 215 RC+G C GK S EE+ R++ ++ L+ Sbjct: 180 GRCSGPCIGKISPEEYKDRVQLFIKFLKG 208 >UniRef50_A7GIE5 GIY-YIG domain protein n=10 Tax=Clostridium RepID=A7GIE5_CLOBL Length = 365 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 88/200 (44%), Gaps = 10/200 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQ 76 +L+ LP PG+Y+ + +Y+GKS N+R RV S+ T +++ Sbjct: 1 MNLKDKAKLLPQSPGIYIMRDSLSNI-IYVGKSKNLRKRVYSYFIKQNNATSKIEKLIKN 59 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD 135 + +ICT E+ ALLLE IK +P +N+ ++ + + +Q+N + + ++ Sbjct: 60 IKDFQYICTDTELEALLLECTFIKCIKPQYNRLMKNHERYIYIQINIKDQYPIIKVASEI 119 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 +G F N L+ ++ + + L L+ S C A+ +C G C Sbjct: 120 KDDNYLYYGPFINYNRILKFVEGLNEILPLIKCNNYLKHKST---CINYAIGKCKGPCIE 176 Query: 196 KESHEEHALRLRQSLERLRV 215 S +++ + + + + Sbjct: 177 NISSKQYKKYIDKVISFFQG 196 >UniRef50_Q7NBC4 UvrABC system protein C n=1 Tax=Mycoplasma gallisepticum RepID=UVRC_MYCGA Length = 592 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 99/257 (38%), Gaps = 14/257 (5%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPD---EAAMLRQSRR 79 +L+ L+ P +PG YL+ + + +YIGK+ NI RV + P + ++ + Sbjct: 4 NLKQKLDLAPKKPGCYLWKNHLNEI-IYIGKAKNIYKRVHQYFNGPKDLKTSKLVNEIFY 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRA 139 + +I E ALLLEA LIK+ +P +N L+ N + + +++ + + Sbjct: 63 VEFIEVNNENEALLLEANLIKKHKPRYNILLKDNNGYPYILMTKEKYPRLIYTRNFDPKK 122 Query: 140 PNLFGLFANRRA-ALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 +G FA+ A + L +GR C L C AC + S Sbjct: 123 GKHYGPFASSEMKAYDLYNLLLKLFPLKNCF-----NKKGRKCEFYDLNLCMKACTHEVS 177 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQ-HPEMTQYHIIQNWLWLGAVNSL---EEA 254 ++ + ++ + KE E + + +L L +L ++ Sbjct: 178 EADYEVMKKKIDYFFHNGADQVLKDLKEKESIASEKFDFEQAKKYLDLQKAINLIFDKQI 237 Query: 255 TTLIRTPAGFDHDGYKI 271 L D Y+I Sbjct: 238 INLYSAKERIDVLAYQI 254 >UniRef50_Q6SI31 Excinuclease ABC, C subunit n=1 Tax=uncultured marine bacterium 105 RepID=Q6SI31_9BACT Length = 622 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 93/256 (36%), Gaps = 10/256 (3%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQS 77 + L+ ++ LP +PGVYL+ + +Y+GK+ +R RV S+L +P A+L Sbjct: 4 QDLKVQISTLPEQPGVYLYFNGAGD-TIYVGKASVLRDRVRSYLSAHGASPRIDALLDDV 62 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEVDF 136 + I T AL LE LIK + P +N LR ++ LQL + V Sbjct: 63 ESLEIIVTDSVAEALALENNLIKHRAPKYNVLLRDDKNYPYLQLTTNEAFPRVLVSRRVQ 122 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 G F A + + + + R R C +KRC C Sbjct: 123 RDGAFYAGPFLPTALARKTMLLTHRLFGIRSCNEVIT-GRRDRPCLEYDIKRCLAPCVAN 181 Query: 197 E-SHEEHALRLRQSLERLRVVCWPWQGAVALKE-QHPEMTQYHIIQNWL-WLGAVNSLEE 253 S E +A + + L + + Q + + W + + +L Sbjct: 182 VCSQERYAEAVEHTRMFLEGRNHELLNTLTSRMTQAAKNEHFEQAAEWRDAIRTIKALRH 241 Query: 254 ATTLIRTPAGFDHDGY 269 + P D D + Sbjct: 242 RQQKMSLPTLGDRDAF 257 >UniRef50_Q83NI9 UvrABC system protein C n=2 Tax=Tropheryma whipplei RepID=UVRC_TROW8 Length = 607 Score = 190 bits (483), Expect = 4e-47, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 102/241 (42%), Gaps = 15/241 (6%) Query: 30 DLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQSRRISWICT 85 ++P +PGVY F E+ + LY+GK+ N+R+R+ S+ ML S+++ W C Sbjct: 8 EIPCKPGVYRFEDENGRI-LYVGKAKNLRNRLGSYFTNARRGRRISYMLSISKKVGWTCV 66 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAPNLFG 144 A +I AL LE IKE P N +L+ ++ L + ++V + A + FG Sbjct: 67 ADDIEALRLEYSWIKEFAPPCNVKLKDDKAYPFLAVTIGEQVPRLLITRRKIQYATH-FG 125 Query: 145 LFANRRAALQALQTIADEQ--KLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 + + + + + C ++ G CF + +C G C K +H ++ Sbjct: 126 PYPKVFHLRETVSLLHKIFQIRTCSPTNYKRAIASGMPCFEGQINKCFGPCSLKTTHLQY 185 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS-LEEATTLIRTP 261 R++ + L L+ +M + + + + ++ A T++ Sbjct: 186 QKRIKNLMAFLEGQSSSL-----LESLKKKMLKASKNKEYEEAAILRDKIQAAQTVLSRS 240 Query: 262 A 262 A Sbjct: 241 A 241 >UniRef50_Q8EWS6 UvrABC system protein C n=1 Tax=Mycoplasma penetrans RepID=UVRC_MYCPE Length = 589 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 95/231 (41%), Gaps = 14/231 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAAMLRQSR 78 E ++ L +P +PG YL+ ++ + +Y+GK+V++ +R+ + R + + Sbjct: 3 EQIKDKLKKIPHKPGCYLWKDKNG-IVIYVGKAVDLANRIKQYFLKDRDLKTKKLANEIC 61 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS 137 + ++ E +LLLE LI + +P +N LR + + + E+ ++Y+ + Sbjct: 62 DVDYVVVNNENESLLLENNLIAKYKPKYNMLLRESNAFPYILVTKEEHPRILYSHDSTKK 121 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR--GRACFRSALKRCAGACCG 195 +G FAN + + L ++ + C + +C G C Sbjct: 122 IKGTYYGPFANSNIKK------YELYNFINRIFPLRKCNKLPNKKCIYYDIGQCLGPCIK 175 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKE-QHPEMTQYHIIQNWLWL 245 K + +++ L++ + + KE Q E + Q +L L Sbjct: 176 KVTRQDYEPYLKEINDFFSGKSKSIDEQLEKKEIQAAEKLMFEDSQKYLEL 226 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P59439 Excinuclease cho n=116 Tax=Gammaproteobacteria R... 304 3e-81 UniRef50_B2JFL2 Excinuclease ABC, C subunit n=2 Tax=Burkholderia... 271 1e-71 UniRef50_Q3AFE5 UvrABC system protein C n=1 Tax=Carboxydothermus... 269 8e-71 UniRef50_A3NXK5 UvrABC system protein C n=59 Tax=Proteobacteria ... 268 1e-70 UniRef50_B8CYK1 Excinuclease ABC, C subunit n=1 Tax=Halothermoth... 268 2e-70 UniRef50_Q31GI3 UvrABC system protein C n=2 Tax=Bacteria RepID=U... 268 2e-70 UniRef50_Q1LKN9 UvrABC system protein C n=32 Tax=Proteobacteria ... 268 2e-70 UniRef50_A3DJ07 UvrABC system protein C n=15 Tax=Bacteria RepID=... 266 6e-70 UniRef50_C5ADA8 UvrABC system protein C (Protein uvrC) n=4 Tax=P... 266 6e-70 UniRef50_A6SXR9 UvrABC system protein C n=19 Tax=Betaproteobacte... 263 4e-69 UniRef50_Q5F928 UvrABC system protein C n=29 Tax=Betaproteobacte... 263 7e-69 UniRef50_C6MYN0 Excinuclease ABC subunit n=1 Tax=Legionella dran... 262 1e-68 UniRef50_B0K791 UvrABC system protein C n=11 Tax=Thermoanaerobac... 261 2e-68 UniRef50_B7AWB5 Putative uncharacterized protein n=1 Tax=Bactero... 261 2e-68 UniRef50_D1RJY2 Excinuclease ABC subunit C n=1 Tax=Legionella lo... 261 3e-68 UniRef50_A6BHR5 Putative uncharacterized protein n=1 Tax=Dorea l... 260 4e-68 UniRef50_A9KSS0 UvrABC system protein C n=59 Tax=Firmicutes RepI... 259 8e-68 UniRef50_Q47EE8 UvrABC system protein C n=6 Tax=Proteobacteria R... 259 1e-67 UniRef50_A9B4F8 Excinuclease ABC, C subunit n=1 Tax=Herpetosipho... 258 1e-67 UniRef50_Q24WC0 UvrABC system protein C n=16 Tax=Firmicutes RepI... 258 2e-67 UniRef50_Q820N6 UvrABC system protein C n=2 Tax=Proteobacteria R... 258 2e-67 UniRef50_A4XIQ3 UvrABC system protein C n=2 Tax=Clostridia RepID... 258 2e-67 UniRef50_B9KY82 Excinuclease ABC, C subunit n=1 Tax=Thermomicrob... 257 3e-67 UniRef50_Q5X1P5 UvrABC system protein C n=7 Tax=Gammaproteobacte... 257 3e-67 UniRef50_Q1MQH2 UvrABC system protein C n=3 Tax=Desulfovibrionac... 257 4e-67 UniRef50_C0ZZE8 UvrABC system protein C n=14 Tax=Actinomycetales... 256 6e-67 UniRef50_Q0BPX7 UvrABC system protein C n=43 Tax=Alphaproteobact... 256 8e-67 UniRef50_A5WBX3 UvrABC system protein C n=3 Tax=Psychrobacter Re... 256 9e-67 UniRef50_D1VGT9 Excinuclease ABC, C subunit n=1 Tax=Frankia sp. ... 256 9e-67 UniRef50_B3QRR8 Excinuclease ABC, C subunit n=3 Tax=Bacteria Rep... 255 1e-66 UniRef50_C9KP10 Excinuclease ABC subunit C n=1 Tax=Mitsuokella m... 254 2e-66 UniRef50_A1BED8 UvrABC system protein C n=12 Tax=cellular organi... 254 2e-66 UniRef50_UPI00017881F9 excinuclease ABC, C subunit n=1 Tax=Geoba... 254 3e-66 UniRef50_D1CFI6 Excinuclease ABC, C subunit n=1 Tax=Thermobaculu... 254 3e-66 UniRef50_Q313T1 UvrABC system protein C n=2 Tax=Desulfovibrio de... 254 3e-66 UniRef50_C6NXT8 Excinuclease ABC subunit C n=2 Tax=Gammaproteoba... 253 5e-66 UniRef50_Q0F271 Excinuclease ABC subunit C n=1 Tax=Mariprofundus... 253 5e-66 UniRef50_Q180Q8 UvrABC system protein C n=8 Tax=Clostridiales Re... 253 5e-66 UniRef50_A4FBL9 UvrABC system protein C n=26 Tax=Actinomycetales... 253 6e-66 UniRef50_B8DRE6 Excinuclease ABC, C subunit n=1 Tax=Desulfovibri... 253 6e-66 UniRef50_B2FK26 UvrABC system protein C n=29 Tax=Proteobacteria ... 252 8e-66 UniRef50_Q2NGT2 UvrABC system protein C n=4 Tax=Methanobacteriac... 252 9e-66 UniRef50_B5EPN1 Excinuclease ABC, C subunit n=2 Tax=Acidithiobac... 252 9e-66 UniRef50_A1WLD5 UvrABC system protein C n=17 Tax=Burkholderiales... 252 1e-65 UniRef50_B8I8F2 UvrABC system protein C n=2 Tax=Clostridium RepI... 252 1e-65 UniRef50_C9LR57 Excinuclease ABC subunit C n=1 Tax=Dialister inv... 252 1e-65 UniRef50_A5EW70 UvrABC system protein C n=1 Tax=Dichelobacter no... 252 1e-65 UniRef50_C1B4L2 UvrABC system protein C n=10 Tax=Actinomycetales... 252 1e-65 UniRef50_Q3IYX6 UvrABC system protein C n=23 Tax=Alphaproteobact... 251 1e-65 UniRef50_Q72DX8 UvrABC system protein C n=3 Tax=Desulfovibrio vu... 251 2e-65 UniRef50_D2RIL8 Excinuclease ABC, C subunit n=3 Tax=Veillonellac... 251 2e-65 UniRef50_Q0A8X6 UvrABC system protein C n=19 Tax=Gammaproteobact... 251 2e-65 UniRef50_Q2G9G8 UvrABC system protein C n=2 Tax=Sphingomonadales... 251 2e-65 UniRef50_Q2JCI3 UvrABC system protein C n=12 Tax=Actinomycetales... 251 2e-65 UniRef50_Q2SF17 UvrABC system protein C n=47 Tax=Proteobacteria ... 251 2e-65 UniRef50_A2RLW6 UvrABC system protein C n=11 Tax=Bacilli RepID=U... 251 3e-65 UniRef50_Q03F33 UvrABC system protein C n=7 Tax=Firmicutes RepID... 250 3e-65 UniRef50_B0VH58 Excinuclease ABC, C subunit n=1 Tax=Candidatus C... 250 5e-65 UniRef50_A0LHP7 Excinuclease ABC, C subunit n=1 Tax=Syntrophobac... 250 5e-65 UniRef50_C1FMJ8 UvrABC system protein C n=14 Tax=Clostridium Rep... 249 6e-65 UniRef50_A1AWP2 Excinuclease ABC subunit C n=1 Tax=Candidatus Ru... 249 8e-65 UniRef50_A0QWV6 UvrABC system protein C n=27 Tax=Actinomycetales... 249 1e-64 UniRef50_Q0RH00 DNA excision repair enzyme UvrABC; UvrC subunit ... 249 1e-64 UniRef50_Q12W02 UvrABC system protein C n=1 Tax=Methanococcoides... 248 1e-64 UniRef50_C5BV40 UvrABC system protein C n=16 Tax=Actinomycetales... 248 1e-64 UniRef50_C9RQJ8 Excinuclease ABC, C subunit n=1 Tax=Fibrobacter ... 248 1e-64 UniRef50_B6IZT9 UvrABC system protein C n=6 Tax=Coxiella burneti... 248 2e-64 UniRef50_B2A711 Excinuclease ABC, C subunit n=2 Tax=Firmicutes R... 248 2e-64 UniRef50_B0SB16 UvrABC system protein C n=6 Tax=Leptospira RepID... 248 2e-64 UniRef50_Q0B0A0 UvrABC system protein C n=1 Tax=Syntrophomonas w... 248 2e-64 UniRef50_C7HUD8 UvrABC system, C protein n=2 Tax=Anaerococcus Re... 247 3e-64 UniRef50_Q2S280 UvrABC system protein C n=1 Tax=Salinibacter rub... 247 3e-64 UniRef50_B6INU7 Excinuclease ABC, C subunit, putative n=18 Tax=c... 247 3e-64 UniRef50_Q4FPI1 UvrABC system protein C n=3 Tax=Candidatus Pelag... 247 3e-64 UniRef50_D1NSJ5 Excinuclease ABC subunit C n=3 Tax=Actinobacteri... 247 4e-64 UniRef50_Q47Z18 UvrABC system protein C n=274 Tax=Gammaproteobac... 246 5e-64 UniRef50_A0Q5Q7 UvrABC system protein C n=18 Tax=Francisella Rep... 246 5e-64 UniRef50_C1PCU9 Excinuclease ABC C subunit domain protein n=1 Ta... 246 5e-64 UniRef50_B2I637 UvrABC system protein C n=15 Tax=Xanthomonadacea... 246 5e-64 UniRef50_Q2LR71 UvrABC system protein C n=1 Tax=Syntrophus acidi... 246 5e-64 UniRef50_Q3ZYA3 UvrABC system protein C n=5 Tax=Dehalococcoides ... 246 5e-64 UniRef50_C0QWI5 Excinuclease ABC, C subunit n=2 Tax=Brachyspira ... 246 6e-64 UniRef50_A5UY12 Excinuclease ABC subunit C n=5 Tax=Chloroflexace... 246 8e-64 UniRef50_B5YHU3 Excinuclease ABC, C subunit n=1 Tax=Thermodesulf... 246 8e-64 UniRef50_B0VLX1 UvrABC system protein C n=17 Tax=Moraxellaceae R... 246 9e-64 UniRef50_B4RF25 UvrC, excinuclease ABC, C subunit n=1 Tax=Phenyl... 246 1e-63 UniRef50_C4XSA3 UvrABC system protein C n=1 Tax=Desulfovibrio ma... 246 1e-63 UniRef50_Q6MKS2 UvrABC system protein C n=1 Tax=Bdellovibrio bac... 245 1e-63 UniRef50_A8GP33 UvrABC system protein C n=14 Tax=Rickettsia RepI... 244 2e-63 UniRef50_A7VUD6 Putative uncharacterized protein n=4 Tax=Clostri... 244 2e-63 UniRef50_B0S0L4 UvrABC system protein C n=2 Tax=Finegoldia magna... 244 2e-63 UniRef50_UPI00016BFB47 excinuclease ABC, C subunit n=1 Tax=Epulo... 244 2e-63 UniRef50_A0L8U4 Excinuclease ABC subunit C n=1 Tax=Magnetococcus... 244 2e-63 UniRef50_C1A8T0 UvrABC system protein C n=1 Tax=Gemmatimonas aur... 244 3e-63 UniRef50_Q2RS75 UvrABC system protein C n=13 Tax=Alphaproteobact... 244 3e-63 UniRef50_D2L1M6 Excinuclease ABC, C subunit n=1 Tax=Desulfovibri... 244 3e-63 UniRef50_D1BLY6 Excinuclease ABC, C subunit n=5 Tax=Veillonellac... 243 4e-63 UniRef50_C4FUE0 Putative uncharacterized protein n=1 Tax=Catonel... 243 4e-63 UniRef50_C7RHW1 Excinuclease ABC, C subunit n=4 Tax=Clostridiale... 243 5e-63 UniRef50_D1BHL1 Excinuclease ABC subunit C n=16 Tax=Actinomyceta... 243 5e-63 UniRef50_C8X3R4 Excinuclease ABC, C subunit n=1 Tax=Desulfohalob... 243 6e-63 UniRef50_B3WE47 UvrABC system protein C n=33 Tax=Bacilli RepID=U... 243 7e-63 UniRef50_C0GMH4 Excinuclease ABC, C subunit n=1 Tax=Desulfonatro... 242 9e-63 UniRef50_C2CW30 Excinuclease ABC subunit C n=1 Tax=Gardnerella v... 242 9e-63 UniRef50_Q01S04 UvrABC system protein C n=2 Tax=Acidobacteria Re... 242 1e-62 UniRef50_C7MCN8 Excinuclease ABC subunit C n=1 Tax=Brachybacteri... 242 1e-62 UniRef50_Q4JVI8 UvrABC system protein C n=8 Tax=Corynebacterium ... 242 1e-62 UniRef50_C5CDH0 Excinuclease ABC, C subunit n=1 Tax=Kosmotoga ol... 242 1e-62 UniRef50_C8QX27 Excinuclease ABC, C subunit n=1 Tax=Desulfurivib... 242 1e-62 UniRef50_B8FHR2 UvrABC system protein C n=1 Tax=Desulfatibacillu... 241 1e-62 UniRef50_B5YF86 UvrABC system protein C n=2 Tax=Dictyoglomus Rep... 241 2e-62 UniRef50_Q1IZB2 UvrABC system protein C n=4 Tax=Deinococcus RepI... 241 2e-62 UniRef50_UPI0001C41B0D excinuclease ABC C subunit UvrC n=1 Tax=M... 241 2e-62 UniRef50_A5M6P1 Excinuclease ABC subunit C n=1 Tax=Streptococcus... 241 2e-62 UniRef50_C7LTD0 Excinuclease ABC, C subunit n=2 Tax=Desulfovibri... 241 2e-62 UniRef50_Q7UPD6 Excinuclease ABC subunit C n=5 Tax=Planctomyceta... 241 2e-62 UniRef50_C7RAS4 Excinuclease ABC, C subunit n=1 Tax=Kangiella ko... 241 2e-62 UniRef50_B3EU62 Excinuclease ABC, C subunit n=2 Tax=Candidatus A... 241 3e-62 UniRef50_A8ZVJ2 Excinuclease ABC, C subunit n=1 Tax=Desulfococcu... 241 3e-62 UniRef50_B8DGB7 UvrABC system protein C (Protein UvrC) (Excinucl... 240 3e-62 UniRef50_Q21AW5 UvrABC system protein C n=89 Tax=Alphaproteobact... 240 3e-62 UniRef50_A0AGX5 Complete genome n=3 Tax=Listeria RepID=A0AGX5_LISW6 240 4e-62 UniRef50_B3DRV5 UvrABC system protein C n=18 Tax=Bifidobacterium... 240 4e-62 UniRef50_O26541 UvrABC system protein C n=1 Tax=Methanothermobac... 240 5e-62 UniRef50_D2RB48 Excinuclease ABC, C subunit n=1 Tax=Gardnerella ... 239 8e-62 UniRef50_C9R9D0 Excinuclease ABC, C subunit n=1 Tax=Ammonifex de... 239 1e-61 UniRef50_C6E9G2 UvrABC system protein C n=3 Tax=Geobacter RepID=... 239 1e-61 UniRef50_C7H041 Excinuclease ABC subunit C n=1 Tax=Eubacterium s... 239 1e-61 UniRef50_B5E2L2 UvrABC system protein C n=268 Tax=Bacilli RepID=... 239 1e-61 UniRef50_D0WMS6 Excinuclease ABC subunit C n=1 Tax=Actinomyces s... 238 1e-61 UniRef50_B1CBT5 Putative uncharacterized protein n=1 Tax=Anaerof... 238 2e-61 UniRef50_A8SNK4 Putative uncharacterized protein n=1 Tax=Parvimo... 237 3e-61 UniRef50_A9NEZ8 Excinuclease ABC, subunit C n=1 Tax=Acholeplasma... 237 3e-61 UniRef50_C9M9X8 Excinuclease ABC, C subunit n=1 Tax=Jonquetella ... 237 3e-61 UniRef50_Q1AUH1 UvrABC system protein C n=1 Tax=Rubrobacter xyla... 237 4e-61 UniRef50_Q6AKB8 UvrABC system protein C n=3 Tax=Deltaproteobacte... 236 5e-61 UniRef50_B7K124 Excinuclease ABC, C subunit n=5 Tax=Cyanobacteri... 236 5e-61 UniRef50_C5NYN4 Excinuclease ABC subunit C n=1 Tax=Gemella haemo... 236 6e-61 UniRef50_A5FM03 UvrABC system protein C n=25 Tax=Bacteroidetes R... 236 7e-61 UniRef50_D2R0D2 Excinuclease ABC C subunit domain protein n=1 Ta... 236 7e-61 UniRef50_Q14NX3 Putative uvrc protein excinuclease abc subunit c... 236 8e-61 UniRef50_UPI0000E87CD9 excinuclease ABC, C subunit n=1 Tax=Methy... 236 8e-61 UniRef50_Q1D921 UvrABC system protein C n=2 Tax=Cystobacterineae... 235 2e-60 UniRef50_C0QET6 UvrABC system protein C n=2 Tax=Desulfobacterace... 235 2e-60 UniRef50_UPI000050F72E excinuclease ABC subunit C n=1 Tax=Brevib... 234 3e-60 UniRef50_Q04EZ7 UvrABC system protein C n=42 Tax=Lactobacillales... 234 4e-60 UniRef50_B6AR33 Excinuclease ABC, C subunit (UvrC) n=3 Tax=Lepto... 233 5e-60 UniRef50_D0RRP8 Excinuclease ABC subunit C n=1 Tax=alpha proteob... 233 5e-60 UniRef50_A1ZTX2 Excinuclease ABC, C subunit n=4 Tax=Bacteroidete... 233 5e-60 UniRef50_A9WT69 UvrABC system protein C n=2 Tax=Actinobacteria (... 233 5e-60 UniRef50_Q1Q607 Similar to uvrABC system protein C (UvrC exinucl... 233 8e-60 UniRef50_C6XFB9 Excinuclease ABC subunit C n=1 Tax=Candidatus Li... 233 9e-60 UniRef50_C2KQB5 Excinuclease ABC subunit C n=2 Tax=Mobiluncus mu... 232 9e-60 UniRef50_Q11YP9 UvrABC system protein C n=3 Tax=Bacteroidetes Re... 232 1e-59 UniRef50_Q5LIY7 UvrABC system protein C n=26 Tax=Bacteroidetes R... 232 1e-59 UniRef50_D1R706 Putative uncharacterized protein n=1 Tax=Parachl... 232 1e-59 UniRef50_C3JAE7 Excinuclease ABC subunit C n=2 Tax=Bacteria RepI... 231 2e-59 UniRef50_C2MAD2 Excinuclease ABC subunit C n=1 Tax=Porphyromonas... 231 2e-59 UniRef50_C1SGC9 Excinuclease ABC, C subunit n=1 Tax=Denitrovibri... 231 3e-59 UniRef50_C7LYI3 Excinuclease ABC, C subunit n=1 Tax=Acidimicrobi... 231 3e-59 UniRef50_D2MQ80 Excinuclease ABC, C subunit n=7 Tax=Bacteria Rep... 231 3e-59 UniRef50_A6NZD4 Putative uncharacterized protein n=1 Tax=Bactero... 230 4e-59 UniRef50_A0M672 UvrABC system protein C n=7 Tax=Bacteroidetes Re... 230 4e-59 UniRef50_D1PLG8 Excinuclease ABC subunit C n=3 Tax=Ruminococcace... 229 7e-59 UniRef50_Q6MDC8 UvrABC system protein C n=1 Tax=Candidatus Proto... 229 7e-59 UniRef50_B3E0M3 Excinuclease ABC subunit C n=1 Tax=Methylacidiph... 229 1e-58 UniRef50_A9EYQ9 Excinuclease ABC, subunit C n=1 Tax=Sorangium ce... 229 1e-58 UniRef50_UPI0001C3237F excinuclease ABC, C subunit n=1 Tax=Conex... 229 1e-58 UniRef50_B2S367 UvrABC system protein C n=4 Tax=Treponema RepID=... 228 3e-58 UniRef50_C1F4W9 UvrABC system protein C n=1 Tax=Acidobacterium c... 228 3e-58 UniRef50_Q5GSR4 UvrABC system protein C n=10 Tax=Wolbachia RepID... 227 4e-58 UniRef50_Q3BWL1 Excinuclease subunit n=5 Tax=Xanthomonas RepID=Q... 227 5e-58 UniRef50_B2RM62 UvrABC system protein C n=4 Tax=Bacteroidetes Re... 226 7e-58 UniRef50_Q3M542 UvrABC system protein C n=11 Tax=Cyanobacteria R... 226 9e-58 UniRef50_C6X0K5 Excinuclease ABC subunit C n=9 Tax=Bacteroidetes... 226 9e-58 UniRef50_D1Y7G8 Excinuclease ABC, C subunit n=1 Tax=Pyramidobact... 225 2e-57 UniRef50_A7HD93 UvrABC system protein C n=5 Tax=Bacteria RepID=U... 224 3e-57 UniRef50_Q26GF0 Excinuclease ABC, C subunit n=5 Tax=cellular org... 224 3e-57 UniRef50_C7N5B1 Excinuclease ABC, C subunit n=6 Tax=Coriobacteri... 223 7e-57 UniRef50_Q2SSM4 UvrABC system protein C n=5 Tax=Mollicutes RepID... 223 9e-57 UniRef50_D0L0M1 DNA polymerase III, epsilon subunit n=1 Tax=Halo... 222 9e-57 UniRef50_D2LI59 Excinuclease ABC, C subunit n=1 Tax=Rhodomicrobi... 222 1e-56 UniRef50_D0LVJ3 Excinuclease ABC, C subunit n=1 Tax=Haliangium o... 221 2e-56 UniRef50_D1B5F2 Excinuclease ABC, C subunit n=2 Tax=Synergistace... 221 3e-56 UniRef50_B0MPX2 Putative uncharacterized protein n=1 Tax=Eubacte... 220 4e-56 UniRef50_B1XZE9 Excinuclease ABC C subunit domain protein n=1 Ta... 219 8e-56 UniRef50_B9LUM9 UvrABC system protein C n=9 Tax=Halobacteriaceae... 219 1e-55 UniRef50_A8GXA7 Excinuclease ABC subunit C n=2 Tax=Rickettsia be... 219 1e-55 UniRef50_Q255T2 UvrABC system protein C n=17 Tax=Chlamydiaceae R... 219 1e-55 UniRef50_C0QPW8 Excinuclease ABC subunit C n=5 Tax=Aquificales R... 218 1e-55 UniRef50_C8WI08 Excinuclease ABC, C subunit n=3 Tax=Coriobacteri... 218 2e-55 UniRef50_Q21VB4 DNA polymerase III, epsilon subunit n=7 Tax=Beta... 218 2e-55 UniRef50_D2RRA5 Excinuclease ABC, C subunit n=2 Tax=Halobacteria... 217 3e-55 UniRef50_UPI0001977D11 excinuclease ABC subunit C n=1 Tax=Helico... 217 4e-55 UniRef50_A9BGW2 UvrABC system protein C n=1 Tax=Petrotoga mobili... 216 7e-55 UniRef50_Q2FPC6 UvrABC system protein C n=16 Tax=Archaea RepID=U... 216 7e-55 UniRef50_B8FTB6 Excinuclease ABC C subunit domain protein n=2 Ta... 216 8e-55 UniRef50_B7J223 UvrABC system protein C n=22 Tax=Borrelia RepID=... 216 8e-55 UniRef50_Q1LGD6 DNA polymerase III, epsilon subunit n=5 Tax=cell... 216 9e-55 UniRef50_B9KXM0 DNA polymerase III, epsilon subunit n=2 Tax=Ther... 216 1e-54 UniRef50_B4U9X0 UvrABC system protein C n=3 Tax=Aquificaceae Rep... 216 1e-54 UniRef50_C3XLG8 Excinuclease abc subunit c n=1 Tax=Helicobacter ... 215 1e-54 UniRef50_C1DM13 Excinuclease ABC protein, subunit C n=1 Tax=Azot... 215 2e-54 UniRef50_Q6SI31 Excinuclease ABC, C subunit n=1 Tax=uncultured m... 214 2e-54 UniRef50_Q7V7L7 UvrABC system protein C n=43 Tax=Cyanobacteria R... 214 3e-54 UniRef50_B9XGZ6 Excinuclease ABC C subunit domain protein n=2 Ta... 214 3e-54 UniRef50_C7RVE9 Exonuclease RNase T and DNA polymerase III n=1 T... 213 5e-54 UniRef50_A9A4M1 Excinuclease ABC, C subunit n=2 Tax=Thaumarchaeo... 213 7e-54 UniRef50_B9M422 UvrABC system protein C n=8 Tax=Desulfuromonadal... 212 9e-54 UniRef50_Q7NBC4 UvrABC system protein C n=1 Tax=Mycoplasma galli... 212 1e-53 UniRef50_A8ESX8 UvrABC system protein C n=26 Tax=Epsilonproteoba... 212 1e-53 UniRef50_A4SZE6 DNA polymerase III, epsilon subunit n=1 Tax=Poly... 212 2e-53 UniRef50_Q2NJ78 UvrABC system protein C n=3 Tax=Candidatus Phyto... 212 2e-53 UniRef50_Q3SKJ9 DNA polymerase III, epsilon subunit n=4 Tax=Prot... 211 3e-53 UniRef50_C7N8N1 Excinuclease ABC, C subunit n=12 Tax=Fusobacteri... 211 3e-53 UniRef50_Q8REL0 UvrABC system protein C n=10 Tax=Bacteria RepID=... 210 5e-53 UniRef50_D1N623 Excinuclease ABC, C subunit n=1 Tax=Victivallis ... 210 6e-53 UniRef50_B5Y9S9 Excinuclease ABC, C subunit n=1 Tax=Coprothermob... 209 6e-53 UniRef50_A7HJI0 UvrABC system protein C n=3 Tax=Thermotogaceae R... 209 1e-52 UniRef50_D2ML33 Excinuclease ABC, C subunit n=1 Tax=Candidatus P... 208 1e-52 UniRef50_Q2GJJ1 UvrABC system protein C n=6 Tax=Anaplasma RepID=... 207 4e-52 UniRef50_Q83NI9 UvrABC system protein C n=2 Tax=Tropheryma whipp... 206 5e-52 UniRef50_B2URH7 Excinuclease ABC C subunit domain protein n=1 Ta... 206 6e-52 UniRef50_C0N1K0 Exonuclease family n=1 Tax=Methylophaga thiooxid... 206 7e-52 UniRef50_A1SLE5 DNA polymerase III, epsilon subunit n=5 Tax=Acti... 206 7e-52 UniRef50_A8FMV1 UvrABC system protein C n=22 Tax=Campylobacter R... 205 1e-51 UniRef50_Q7VK73 UvrABC system protein C n=2 Tax=Helicobacter Rep... 205 2e-51 UniRef50_P47448 UvrABC system protein C n=2 Tax=Mycoplasma RepID... 204 3e-51 UniRef50_Q2L1Q9 Excinuclease (Fragment) n=1 Tax=Bordetella avium... 203 5e-51 UniRef50_A5KSN0 Excinuclease ABC, C subunit domain protein n=2 T... 203 6e-51 UniRef50_Q8EWS6 UvrABC system protein C n=1 Tax=Mycoplasma penet... 202 8e-51 UniRef50_A8F4P7 UvrABC system protein C n=6 Tax=Thermotogaceae R... 202 1e-50 UniRef50_B3R8V7 DNA polymerase III, epsilon subunit + GIY-YIG en... 202 1e-50 UniRef50_A6DMD6 Excinuclease ABC subunit C n=1 Tax=Lentisphaera ... 199 7e-50 UniRef50_Q2S2L6 Exonuclease family n=2 Tax=Salinibacter ruber DS... 199 8e-50 UniRef50_C3XEM6 Excinuclease ABC subunit C n=1 Tax=Helicobacter ... 199 9e-50 UniRef50_D1VLC1 DNA polymerase III, epsilon subunit n=1 Tax=Fran... 199 1e-49 UniRef50_C5RNQ3 Excinuclease ABC C subunit domain protein n=1 Ta... 198 2e-49 UniRef50_A6M201 Excinuclease ABC, C subunit domain protein n=5 T... 198 2e-49 UniRef50_B1AJ20 UvrABC system protein C n=15 Tax=Ureaplasma RepI... 197 3e-49 UniRef50_B2KBS4 Excinuclease ABC C subunit domain protein n=1 Ta... 197 4e-49 UniRef50_B3QSB2 DNA polymerase III, epsilon subunit n=1 Tax=Chlo... 196 6e-49 UniRef50_C1YUT4 Exonuclease, DNA polymerase III, epsilon subunit... 196 8e-49 UniRef50_C6NVW4 DNA polymerase III epsilon subunit n=1 Tax=Acidi... 196 1e-48 UniRef50_Q7NKN5 Excinuclease ABC subunit C n=1 Tax=Gloeobacter v... 196 1e-48 UniRef50_B1H0C4 Excinuclease ABC subunit C n=1 Tax=uncultured Te... 194 3e-48 UniRef50_A7GIE5 GIY-YIG domain protein n=10 Tax=Clostridium RepI... 194 3e-48 UniRef50_C4K928 DNA polymerase III, epsilon subunit n=1 Tax=Thau... 194 3e-48 UniRef50_Q1YU82 DNA polymerase III, epsilon subunit n=1 Tax=gamm... 193 5e-48 UniRef50_Q1CZB4 GIY-YIG catalytic domain protein n=1 Tax=Myxococ... 191 3e-47 Sequences not found previously or not previously below threshold: >UniRef50_P59439 Excinuclease cho n=116 Tax=Gammaproteobacteria RepID=CHO_ECOL6 Length = 295 Score = 304 bits (778), Expect = 3e-81, Method: Composition-based stats. Identities = 287/295 (97%), Positives = 293/295 (99%) Query: 1 MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSR 60 MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKS+NIRSR Sbjct: 1 MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSINIRSR 60 Query: 61 VLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ 120 VLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ Sbjct: 61 VLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ 120 Query: 121 LNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA 180 LNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA Sbjct: 121 LNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA 180 Query: 181 CFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQ 240 CFRSALKRCAGACCGKESH++HALRLRQSLERLRVVCWPW+GAVALKEQHPEMTQYHIIQ Sbjct: 181 CFRSALKRCAGACCGKESHDDHALRLRQSLERLRVVCWPWKGAVALKEQHPEMTQYHIIQ 240 Query: 241 NWLWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRAS 295 NWLWLGAVNSL+EATTLIR PAGFDHDGYKILCKPLLSGNYEITELDP NDQ+AS Sbjct: 241 NWLWLGAVNSLKEATTLIRAPAGFDHDGYKILCKPLLSGNYEITELDPVNDQQAS 295 >UniRef50_B2JFL2 Excinuclease ABC, C subunit n=2 Tax=Burkholderia RepID=B2JFL2_BURP8 Length = 740 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 105/279 (37%), Gaps = 16/279 (5%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSR 78 + L LP PGVY ++ E + LY+GK+ +++ RV S+ +P A M+ + Sbjct: 39 DPKKVLRQLPHMPGVYRYYDEQGAV-LYVGKARDLKKRVSSYFTKTLLSPRIAMMVSRIA 97 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 +I T E ALLLE LIK P +N R ++ L+L + + + Sbjct: 98 KIETTVTRSEAEALLLENNLIKALAPRYNILFRDDKSYPYLKLTGHQFPRMAYYRGSVDK 157 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG F + A +++Q + +L +R R C + RC C G + Sbjct: 158 KNQYFGPFPSAWAVRESIQILQRVFQLRTCE-DSVFNNRTRPCLLHQIGRCTAPCVGAVT 216 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 E++A + + L +KE +M + + AV + + + + Sbjct: 217 EEDYARDVSNASRFLLGRQSEV-----MKELEQKMHAFASELKFEQAAAVRNQMSSLSTV 271 Query: 259 RTPAGF----DHDGYKILCKPLLSGNYEITELDPANDQR 293 D D IL L G + + Sbjct: 272 LHQQAIEVGGDSDV-DILAVVALGGRVCVNLAMVRGGRH 309 >UniRef50_Q3AFE5 UvrABC system protein C n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=UVRC_CARHZ Length = 607 Score = 269 bits (688), Expect = 8e-71, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 105/275 (38%), Gaps = 22/275 (8%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQ 76 L + +LP PGVYL+ E + +Y+GK+ N+++RV S+ + P M+ + Sbjct: 1 MTLWEKVKNLPDSPGVYLYKDEKGEV-IYVGKAKNLKNRVRSYFQPPEKLLPKTRVMMEK 59 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 +R I I T+ E+ AL+LE LIK +P +N L+ ++ L++ + + Sbjct: 60 ARDIEVIITSTEVEALILEQNLIKRYRPRYNILLKDDKSYPYLKITGEEFPRLLITRRVV 119 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 + FG + + A + + + K + R C +K+C+ C G+ Sbjct: 120 NDGGRYFGPYPDAGALNETYKLLRSIFKFRTCT-PTIFAQKKRPCLNFHIKKCSAPCAGE 178 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 S EE+ + ++ L G +K+ EM + + A Sbjct: 179 ISREEYFKEIEMVVDFLEGR-----GENLIKKLKKEMAIASDNLEFERAAKLRDQILALE 233 Query: 257 LIRTPAGFDHDGYKILCKPLLSGNYEITELDPAND 291 I N ++ + + Sbjct: 234 KILAKQKISR----------GQRNADVVVVANREN 258 >UniRef50_A3NXK5 UvrABC system protein C n=59 Tax=Proteobacteria RepID=UVRC_BURP0 Length = 747 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 104/288 (36%), Gaps = 16/288 (5%) Query: 14 AAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPD 69 + E + L LP PGVY ++ D + LY+GK+ +++ RV S+ +P Sbjct: 3 SPDAPESRFEPKPILAQLPHLPGVYRYYDAQDAV-LYVGKARDLKKRVSSYFTKTQLSPR 61 Query: 70 EAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVV 129 A M+ + RI T E ALLLE LIK P +N R ++ L+L R + Sbjct: 62 IAMMITRIARIETTVTRSEAEALLLENNLIKALAPRYNILFRDDKSYPYLKLTGHRFPRM 121 Query: 130 YAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRC 189 + FG F + A +++Q + +L +R R C + RC Sbjct: 122 AYYRGAVDKKNQYFGPFPSAWAVRESIQILQRVFQLRTCE-DSVFNNRTRPCLLHQIGRC 180 Query: 190 AGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVN 249 + C G E++A + + L G E +M + + AV Sbjct: 181 SAPCVGAIGEEDYARDVDNASRFLLGRQGEVMG-----ELERKMHAFAAELKFEQAAAVR 235 Query: 250 SLEEATTLIRTPAGFDH----DGYKILCKPLLSGNYEITELDPANDQR 293 + + + D D IL G + + Sbjct: 236 NQMSSLAKVLHQQAIDVGGDSDV-DILAVVAQGGRVCVNLAMVRGGRH 282 >UniRef50_B8CYK1 Excinuclease ABC, C subunit n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYK1_HALOH Length = 607 Score = 268 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 103/278 (37%), Gaps = 15/278 (5%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAAMLRQSRR 79 + L LP RPGVYL E+ + +Y+GK+ ++R RV S+ R M++ Sbjct: 4 IEEQLKRLPDRPGVYLMKDETGEV-IYVGKAKSLRRRVRSYFRKGNHTFKTKIMVKHIAD 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSR 138 +I T E+ A +LEA LIK+ P FN RL+ ++ +++ ++ ++ + + Sbjct: 63 FDYIVTDTEVEAFILEANLIKKYNPKFNIRLKDDKTYPYIKVTVQEDFPRIFKTRLVKND 122 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS-RGRACFRSALKRCAGACCGKE 197 FG F + A + + + D L LE R C + +C G C G Sbjct: 123 GNRYFGPFTDVNAIYKTIDVLKDLFSLRTCKKNLEAGKPEKRPCLNYHIGKCVGPCIGAI 182 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + + + L + E EM Q +N+ A Sbjct: 183 DRNSYRELVDRVCLFLSGKQDEL-----INEVEKEMYQAAEKKNFEKAARFRDAVRALKN 237 Query: 258 IRTPAGF---DHDGYKILCKPLLSGNYEITELDPANDQ 292 I + I+ G + L N + Sbjct: 238 ISAQQKVMSSKNINQDIIALVEEEGEACVQVLFIRNGR 275 >UniRef50_Q31GI3 UvrABC system protein C n=2 Tax=Bacteria RepID=UVRC_THICR Length = 613 Score = 268 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 59/285 (20%), Positives = 105/285 (36%), Gaps = 22/285 (7%) Query: 15 AAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DE 70 +E + +FL L RPGVYL + S + +Y+GK+ N++ RV S+ + Sbjct: 2 PNQFETQFDIDAFLKHLTERPGVYLMYDASGQI-IYVGKAKNLKRRVSSYFKKRHEEIKT 60 Query: 71 AAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVV 129 ++ Q I T E AL+LE LIK +P +N R ++ + + K+ + Sbjct: 61 ETLVSQVASIEVTVTDTESEALILENTLIKRHKPRYNILFRDDKSYPYIFVSTGKKFPSL 120 Query: 130 YAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRC 189 + FG F N A Q L + + R R C + +KRC Sbjct: 121 SYHRGAKRKVGRYFGPFPNASAVHQTLHALQKIFPVRQCTES-VFNHRSRPCLQYQIKRC 179 Query: 190 AGACC-GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAV 248 +G C G + E+ ++ ++ L + ++ +M Q + Sbjct: 180 SGPCVEGLVTEAEYNEDVQHTIAFLEGKSFDV-----IESLGHKMQQASDEFEFEKAALY 234 Query: 249 NSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQR 293 A I++ L S + ++ L +Q Sbjct: 235 RDKISALRAIQSQ---------HLINQPGSKDTDVVALAEEANQV 270 >UniRef50_Q1LKN9 UvrABC system protein C n=32 Tax=Proteobacteria RepID=UVRC_RALME Length = 673 Score = 268 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 107/293 (36%), Gaps = 18/293 (6%) Query: 11 EFEAAAIYEYPE-HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR--- 66 E + + P R L +P PGVY + + LY+GK+ +++ RV S+ Sbjct: 16 ESDTPESSDAPAFDPRPILARMPGLPGVYRYFDADGNI-LYVGKARDLKKRVSSYFNKTQ 74 Query: 67 -TPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR 125 +P A M+ + RI E ALLLE LIK P +N R ++ L+L + Sbjct: 75 LSPRIAMMVAKIARIDTTVVRTEAEALLLENNLIKALAPRYNILFRDDKSYPFLRLTGHK 134 Query: 126 VDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSA 185 + R FG F + A +++Q + +L +R R C Sbjct: 135 FPRMAYYRGATDRKHQYFGPFPSAHAVRESMQILQKVFQLRTCE-DTVFNNRTRPCLLHQ 193 Query: 186 LKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWL 245 + RC G C G S +++A + + L+ L+ +M + + + Sbjct: 194 IHRCTGPCVGAISEDDYARDVSNAARFLQGRETEV-----LEGLQSKMEAHAVQLEFEQA 248 Query: 246 GAVNSLEEATTLIRTPAGFD-----HDGYKILCKPLLSGNYEITELDPANDQR 293 AV A + + + D IL + G + + Sbjct: 249 AAVRDQIAALSTVLKRQAVEEVGQARDI-DILAVAVQGGRACVNLAMVRGGRH 300 >UniRef50_A3DJ07 UvrABC system protein C n=15 Tax=Bacteria RepID=UVRC_CLOTH Length = 625 Score = 266 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 99/249 (39%), Gaps = 13/249 (5%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQS 77 ++ L LP +PGVY+ E+ + +Y+GK+V +++RV + ++ P AM+ Sbjct: 3 DIQEELKKLPDKPGVYIMKDENGEI-IYVGKAVVLKNRVRQYFQSLSNQTPKVRAMVAHI 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDF 136 + +I T E+ AL+LE LIK+ +P FN L+ ++ +++ + + Sbjct: 62 KEFEYIVTDTELEALILECNLIKKHRPKFNILLKDDKNYPYIKVTMNEDFPRILMTRRVE 121 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGL-EPLSRGRACFRSALKRCAGACCG 195 FG + + A + + + + L + +GR C + +C G C G Sbjct: 122 KDGAKYFGPYTSAYAVRETIDLVKKLFPVKTCSKVLPRDIGKGRPCLNYHIYQCLGPCQG 181 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 S EE+ ++ L +K+ +M + + + + Sbjct: 182 NVSKEEYRFMMQDVCNFLGGRQED-----IIKKLEKDMKEAADNLEFERAARIRDKINSL 236 Query: 256 TLIRTPAGF 264 I Sbjct: 237 KHIAEKQKI 245 >UniRef50_C5ADA8 UvrABC system protein C (Protein uvrC) n=4 Tax=Proteobacteria RepID=C5ADA8_BURGB Length = 756 Score = 266 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 101/278 (36%), Gaps = 14/278 (5%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSR 78 + L LP PGVY ++ + ++ LY+GK+ N++ RV S+ +P A M+ + Sbjct: 30 EPKPVLAQLPHLPGVYRYYDAAGSV-LYVGKARNLKKRVSSYFTKTQLSPRIAMMVTRIA 88 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 RI T E ALLLE LIK P +N R ++ L+L + R Sbjct: 89 RIETTVTRSEAEALLLENNLIKALAPRYNILFRDDKSYPYLKLTGHAFPRMAYYRGAVDR 148 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG F + A +++Q + +L +R R C + RC+ C G Sbjct: 149 KNQYFGPFPSAWAVRESIQILQRVFQLRTCE-DSVFNNRTRPCLLHQIGRCSAPCVGAID 207 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 ++A + + L +KE +M + + AV + + + Sbjct: 208 AADYARDVANASRFLLGRQSEV-----MKELEQKMHGFAAELKFEQAAAVRNQMSSLATV 262 Query: 259 RTPAGFDHDGY---KILCKPLLSGNYEITELDPANDQR 293 + IL G + + Sbjct: 263 LHQQAIEVGSESDVDILAVVAHGGRVCVNLAMVRGGRH 300 >UniRef50_A6SXR9 UvrABC system protein C n=19 Tax=Betaproteobacteria RepID=UVRC_JANMA Length = 618 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 107/288 (37%), Gaps = 16/288 (5%) Query: 14 AAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPD 69 + + + LP PGVY + D + LY+GK+ +++ RV S+ +P Sbjct: 3 ETDAPDPRAIVLETVAKLPNLPGVYRYFDAEDNL-LYVGKARDLKKRVSSYFLKNLASPR 61 Query: 70 EAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVV 129 A M+ + R+ T E ALLLE LIK QP +N R ++ L++ + + Sbjct: 62 TALMVERIARLETTVTRSEAEALLLENNLIKTLQPRYNILFRDDKSYPYLKITGQEYPRM 121 Query: 130 YAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRC 189 + FG F + A +++Q + L +R R C + RC Sbjct: 122 AYYRGAVDKKNQYFGPFPSGWAVKESMQILQKVFLLRTCE-DSVFANRTRPCLLHQIHRC 180 Query: 190 AGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVN 249 +G C S E++AL + + + LR L+ +M Y + V Sbjct: 181 SGPCVNFISKEDYALDVENAAKFLRGRQSEV-----LETLQGKMLAYAEELKFEQAALVR 235 Query: 250 SLEEATTLIRTPAGF----DHDGYKILCKPLLSGNYEITELDPANDQR 293 + A + + D D I+ + G + + Sbjct: 236 NQINALSRVLHQQSMETGGDADI-DIIAVIVQGGRACVNLAMVRGGRH 282 >UniRef50_Q5F928 UvrABC system protein C n=29 Tax=Betaproteobacteria RepID=UVRC_NEIG1 Length = 617 Score = 263 bits (671), Expect = 7e-69, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 106/293 (36%), Gaps = 21/293 (7%) Query: 11 EFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----R 66 E + ++ P FL +LP PGVY F E + LY+GK+VN++ RV + Sbjct: 4 ENRSPEQFDIP----LFLKNLPKLPGVYRFFDEGGNV-LYVGKAVNLKRRVSGYFQKNDH 58 Query: 67 TPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV 126 +P A M++Q R I T E AL+LE IK P +N R ++ L L+ + Sbjct: 59 SPRIALMVKQVRHIETTITRSEAEALILENNFIKALSPKYNILFRDDKSYPYLMLSGHQY 118 Query: 127 DVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSAL 186 + FG + N A ++Q + L R R C + Sbjct: 119 PQMAYYRGTLKNPNQYFGPYPNSNAVRDSIQVLQKVFMLRTCE-DSVFEHRDRPCLLYQI 177 Query: 187 KRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLG 246 KRC C G S E++ +RQ+ L + +M + Sbjct: 178 KRCTAPCVGHISEEDYCDSVRQAATFLNGKTDELT-----RTLQHKMQTAAANLQFEEAA 232 Query: 247 AVNSLEEATTLIRTPAGFD------HDGYKILCKPLLSGNYEITELDPANDQR 293 +A +I++ D + +L + G + + + Sbjct: 233 RYRDQIQALGIIQSNQFIDSKNPNNPNDIDLLALAVSDGLVCVHWVSIRGGRH 285 >UniRef50_C6MYN0 Excinuclease ABC subunit n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MYN0_9GAMM Length = 620 Score = 262 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 63/278 (22%), Positives = 110/278 (39%), Gaps = 18/278 (6%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLRQSR 78 L FL LP PG+Y + T+ LY+GK+ N++ RV S+ +++ Q Sbjct: 9 ELTQFLAKLPNEPGIYRMLDQEGTV-LYVGKAANLKKRVTSYFNKQNTGVKTRSLVSQIA 67 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKEVDFS 137 I T E ALLLE+ LIK +P +N LR ++ + L+E + + Sbjct: 68 SIEISVTRSETEALLLESNLIKALRPKYNVLLRDDKSYPYIHLSEHPDFPRIESYRSKKK 127 Query: 138 R-APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 A N FG + + A + + TI K+ +R R C + +KRC C Sbjct: 128 PLAGNFFGPYPSVTAVKETIVTIQKVFKIRNC-RDSYFNARSRPCLQYQIKRCTAPCVHY 186 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 + +E+ ++ ++ L+ + L E M + + N+ + + Sbjct: 187 ITSDEYQRSVQDAMRFLQGK-----SQLILDELAKRMEEAVLNLNFEEAAMLRDQIKNLR 241 Query: 257 LIRTPAGF-----DHDGYKILCKPLLSGNYEITELDPA 289 L++ G D D I P + +T + Sbjct: 242 LVQEQQGMMQLSGDADAIAIEVSPGFACVQCVTIREGK 279 >UniRef50_B0K791 UvrABC system protein C n=11 Tax=Thermoanaerobacterales RepID=UVRC_THEP3 Length = 615 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 104/277 (37%), Gaps = 22/277 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQ 76 + L LP +PGVY+ +S + +Y+GK+V +++RV + + P ML Sbjct: 1 MTIEEKLKLLPEKPGVYIMKDKSGKI-IYVGKAVVLKNRVRQYFQNKEKQLPKVKVMLSH 59 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD 135 +I T E+ AL+LE LIK+ +P +N L+ ++ +++ + + Sbjct: 60 VEDFEYIVTDTELEALMLECNLIKKYKPKYNVLLKDDKNYPYIKVTVNEEYPRIMFTRRI 119 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEP-LSRGRACFRSALKRCAGACC 194 FG +++ A + ++ + + +E + + R C + C+ C Sbjct: 120 EPDGAKYFGPYSSAFAVRETIKLVRKMFPIRTCNKNIEKDMGKVRECLYYHIGLCSAPCT 179 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 K + E++ + Q++ L +++ +M + + + Sbjct: 180 NKINKEDYIKLVDQAVLFLDGKRDWL-----IQKLKEDMKKAAEELRFEEAARIRD---- 230 Query: 255 TTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPAND 291 + K + +I + + D Sbjct: 231 -----QIFAIERTSEKQKVVSVGEDEQDIISMARSAD 262 >UniRef50_B7AWB5 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AWB5_9BACE Length = 640 Score = 261 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 109/271 (40%), Gaps = 16/271 (5%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQS 77 + L LP++PGVY+ H ++D + +YIGK+V++++RV + ++ M+ Sbjct: 3 DIEEELKKLPSKPGVYIMHDKTDAI-IYIGKAVSLKNRVRQYFQSSRNLSVKIQHMVSNI 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDF 136 +I T E+ AL+LE LIKE +P +N L+ ++ +++ ++ V Sbjct: 62 DHFEYIITDSELEALVLECNLIKEHRPKYNTMLKDDKSYPFIKVTVNEKYPRVLFARSMK 121 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLE-PLSRGRACFRSALKRCAGACCG 195 FG + + A ++ + ++ L + + R C + +C+ C G Sbjct: 122 KDKSRYFGPYTSAGAVKDTIELLCRLYRIRTCSRKLPADMCKDRPCLNYHINQCSAPCQG 181 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 S EE+ +RQ ++ L L + +M + + L + Sbjct: 182 YISEEEYKESVRQVIDFLNGNYSE-----ILNKLKDKMMEASDKMEYEDAAQYRDLITSV 236 Query: 256 TLIRTPAGF---DHDGYKILCKPLLSGNYEI 283 I D + ++ + + + Sbjct: 237 KQIAQKQKITDSDFEDRDVIACAIQGDDAVV 267 >UniRef50_D1RJY2 Excinuclease ABC subunit C n=1 Tax=Legionella longbeachae D-4968 RepID=D1RJY2_LEGLO Length = 631 Score = 261 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 111/288 (38%), Gaps = 21/288 (7%) Query: 19 EYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE----AAML 74 + L FL LP PG+Y ES + LY+GK+ N++ RV S+ +++ Sbjct: 13 NISKELALFLAKLPNEPGIYRMLDESGAV-LYVGKAANLKKRVTSYFNKQKTGIKTRSLV 71 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKE 133 Q I T E ALLLE+ LIK +P +N LR ++ + L+ + + Sbjct: 72 TQIASIEISVTRSETEALLLESNLIKTLKPKYNVLLRDDKSYPYIHLSNHPQFPRIESYR 131 Query: 134 -VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGA 192 + + FG + + + + TI K+ +R R C + +KRC Sbjct: 132 SKKKPVSGDFFGPYPSSGTVKETIVTIQKVFKIRNC-RDSYFNARSRPCLQYQIKRCTAP 190 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C S E++ ++ ++ L+ C + L E M + N+ + Sbjct: 191 CVNYISPEDYKRSVQDAMRFLQGKC-----QLILDELAKRMDKAVSELNFEEAALLRDQI 245 Query: 253 EATTLIRTPAGF-----DHDGYKILCKPLLSGNYEITELDPANDQRAS 295 + L++ G D D I P G + + + Q S Sbjct: 246 KCLRLVQEQQGILQLQGDADAIAIEVNP---GFACVQCVTIRDGQILS 290 >UniRef50_A6BHR5 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHR5_9FIRM Length = 617 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 100/264 (37%), Gaps = 19/264 (7%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQS 77 +++ L LP +PGVYL H E D + +Y+GK++++++RV + ++ M+ Sbjct: 5 NIQEELKKLPGKPGVYLMHDEKDAI-IYVGKAISLKNRVRQYFQSSRNKGAKIEQMVTHI 63 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDF 136 R +I T E+ AL+LE LIKE +P +N L ++ +++ + V Sbjct: 64 SRFEYIVTDSELEALVLECNLIKEHRPKYNTMLMDDKTYPFIKVTVNEPFPRVMMARRMK 123 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL-SRGRACFRSALKRCAGACCG 195 FG + + A ++ I + L + R C + +C C G Sbjct: 124 KDKAKYFGPYTSTGAVKDTIELIRKLYHIRSCNRSLPKDIGKERPCLNYHIHQCYAPCQG 183 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 S EE+ + + + L P LKE +M + L + Sbjct: 184 YISREEYRKSIDEVVRFLNGNYDP-----ILKELEEKMLDASENLEFEKAIEYRELLASV 238 Query: 256 TLIRTPAGF------DHDGYKILC 273 I D D + Sbjct: 239 QKIAQKQKITDTAGDDRDIIAMAS 262 >UniRef50_A9KSS0 UvrABC system protein C n=59 Tax=Firmicutes RepID=UVRC_CLOPH Length = 628 Score = 259 bits (662), Expect = 8e-68, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 100/277 (36%), Gaps = 22/277 (7%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQS 77 L L LP +PGVY+ H D + +Y+GK++++++RV + ++ M+ Sbjct: 3 DLDEELKKLPAKPGVYIMHNNKDEI-IYVGKAISLKNRVRQYFQSSRNLSTKIQQMVSNI 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDF 136 +I E+ AL+LE LIKE +P +N L+ ++ +++ + V Sbjct: 62 DHFEYIIVDSEMEALVLECNLIKEHRPKYNTMLKDDKSYPYIKVTVNEAYPRVLFARQQK 121 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL-SRGRACFRSALKRCAGACCG 195 FG + + A L + + L R C +K+C C G Sbjct: 122 KDKAKYFGPYTSLGAVKDILDLLRRLYFIRTCNRNLPKDIGLERPCLYYHIKQCKAPCQG 181 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 S EE+ + + +E L A+ K+ +M + L + Sbjct: 182 YISEEEYRKSIDEVIEFLNGNY-----ALVTKDLQAKMKAASENLEFEEAAGYRDLILSV 236 Query: 256 TLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 + K + + +I D+ Sbjct: 237 EKLSQ---------KQKASDVDGVDRDIIAFASTGDE 264 >UniRef50_Q47EE8 UvrABC system protein C n=6 Tax=Proteobacteria RepID=UVRC_DECAR Length = 603 Score = 259 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 103/279 (36%), Gaps = 20/279 (7%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRI 80 ++FL L PGVY + LY+GK+ N++ RV S+ R +P A M+ Q I Sbjct: 6 KAFLATLTELPGVYRMLDIGGNV-LYVGKAKNLKKRVASYFRENLSSPRIAHMVSQIASI 64 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 T E ALLLE LIK P +N R ++ + L++ + + + R Sbjct: 65 ETTATRTEAEALLLENNLIKSLAPRYNILFRDDKSYPYIVLSKGKFPRLGFFRGNPDRKA 124 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 + FG + + A ++ + +L +R R C +KRC+G C G S + Sbjct: 125 DYFGPYPSSWAVRDSIHLMQKMFRLRTCE-DTVFSNRSRPCLLYQIKRCSGPCVGFISAD 183 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 ++A ++ + L + M + + ++ ++ Sbjct: 184 DYAADIQLAAMFLLGKQQEVT-----RRLTKSMEEASAKLAFEQAAVFRDQIQSLHQVQE 238 Query: 261 PA------GFDHDGYKILCKPLLSGNYEITELDPANDQR 293 G D D L +G + + Sbjct: 239 KQFVSSSKGEDVDV---LVAIKEAGQLCVNLAMVRGGRH 274 >UniRef50_A9B4F8 Excinuclease ABC, C subunit n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B4F8_HERA2 Length = 641 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 108/276 (39%), Gaps = 22/276 (7%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQSR 78 L +LP PGVY++ +++T+ +Y+GKS ++R RV S+ P +++ Sbjct: 15 FEERLRNLPLSPGVYIYRDQANTI-IYVGKSKSLRDRVRSYFGAPRGLTSKTRRLVQNIA 73 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 +I T E+ ALLLE LIK+ +P +N L+ ++ +++ ++ V Sbjct: 74 DFEFITTDTELEALLLEMNLIKKHRPRYNVLLKDDKSYPYIKITKEAWPRVLRVRKVIED 133 Query: 139 APNLFGLFANRRAALQALQTIADE--QKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 FG FA + ++ + +LC + + R RAC +KRC G C Sbjct: 134 GGIYFGPFAKASSVYATIELLNKLFAFRLCNDDMFKKHERRNRACMYYDIKRCLGPCANN 193 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 + EE++ + Q L L++ +M Q + V +A Sbjct: 194 CTTEEYSTAINQVRLFLGGKPEA-----ILRDLKVKMNQAAEDLQFERAAYVRDQIKAVE 248 Query: 257 LIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 + + + + ++ + Sbjct: 249 RV---------MERQKVLNTAASDQDVIAFARDEGK 275 >UniRef50_Q24WC0 UvrABC system protein C n=16 Tax=Firmicutes RepID=UVRC_DESHY Length = 607 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 91/256 (35%), Gaps = 20/256 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAAMLRQSR 78 E LR L+ LP +PGVYL S + +Y+GK+ +++RV S+ M+ Sbjct: 18 EILREKLSLLPDKPGVYLMKDASGQI-IYVGKAKVLKNRVRSYFTGSHNGKTQLMISLIA 76 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 I T E+ ALLLE LIK+ P +N LR ++ + + ++ + Sbjct: 77 DFETIITDSEVEALLLECNLIKKHNPKYNILLRDDKTYPFITITDEAHPRILVTRQVKKG 136 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 A +G + N AA +A + + + C L +C G C Sbjct: 137 AGKYYGPYPNATAAKEAARLLNRLFPFRKCR-----QIPNKPCLYYHLGQCLGPCQVDVP 191 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 E + +++ L+ LK +M + + L E + Sbjct: 192 KEAYDKIRKEAAAFLKGDQGA-----ILKALEKKMKEASENLEFERAKEYRDLMEDLKKV 246 Query: 259 RTPAGF------DHDG 268 D D Sbjct: 247 GEKQNITLNDFVDRDV 262 >UniRef50_Q820N6 UvrABC system protein C n=2 Tax=Proteobacteria RepID=UVRC_NITEU Length = 604 Score = 258 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 59/274 (21%), Positives = 101/274 (36%), Gaps = 20/274 (7%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRI 80 ++F+ LP +PGVY + + +Y+GK++++R RV S+ + +P M+ Q I Sbjct: 9 KAFVLTLPAQPGVYRMLNAAGDV-IYVGKAIDLRKRVSSYFQKSGLSPRIQLMVSQIAGI 67 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 T E ALLLE LIK P +N R ++ L L + Sbjct: 68 ETTVTRSEAEALLLENNLIKSLAPRYNILFRDDKSYPYLLLTRHIFPRLAFYRGALDDRH 127 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG F N ++Q + +L R R C +KRC+G C G + E Sbjct: 128 QYFGPFPNAGVVKSSIQLLQKVFRLRTCE-NSVFDHRTRPCLLYQIKRCSGPCVGLITPE 186 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 + ++ + L+ LK +M Q++ + +A I+ Sbjct: 187 AYQQDVKSAAMFLQGKQDEV-----LKTIEQKMFTASDQQDYEQAAQLRDQMQALRKIQE 241 Query: 261 PAGFDHDGYKILCKPLLSGNYEITELDPANDQRA 294 K + + ++ D A Sbjct: 242 ---------KQFVDSGKALDADVIACAIEPDSHA 266 >UniRef50_A4XIQ3 UvrABC system protein C n=2 Tax=Clostridia RepID=UVRC_CALS8 Length = 593 Score = 258 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 62/278 (22%), Positives = 116/278 (41%), Gaps = 14/278 (5%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAAMLRQSR 78 L+ L +LPT PGVY+ E+ + +Y+GK+VN+R+RV + + P M+++ + Sbjct: 3 TLQEKLANLPTTPGVYMMKDENGKV-IYVGKAVNLRNRVRQYFQNSDMTPKTRLMVKKIK 61 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 +I T E+ AL+LE LIKE +P +N LR ++ +++ + + Sbjct: 62 DFEYIVTDTEVEALILECNLIKEYRPKYNVLLRDDKNYQYIKITNEMFPRLVTTRKVEKD 121 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL-SRGRACFRSALKRCAGACCGKE 197 FG + + + Q ++ + L +GR C ++RC G C G Sbjct: 122 GAKYFGPYVSGYSVKQTIELLKSLFMLRTCKRKFPDQLGKGRPCLNFYIERCLGVCKGDI 181 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 EE+ + ++++ L G ++E +M +Y + + + + Sbjct: 182 PEEEYQKLVEKAVKVLSGK-----GDEIVEELKKKMFEYADNLMFEKAQEIKNKITSLEQ 236 Query: 258 IRTPAGF---DHDGYKILCKPLLSGNYEITELDPANDQ 292 I T D ++ S N I L N + Sbjct: 237 IITKQKVIYADDRSEDVINYAEDSSNICIVVLVIRNGK 274 >UniRef50_B9KY82 Excinuclease ABC, C subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KY82_THERP Length = 625 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 94/282 (33%), Gaps = 17/282 (6%) Query: 12 FEAAAIYEYPEH-LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-- 68 + + E ++ L L PGVYL + +Y+GK+ ++R R+ S+ + Sbjct: 4 DMVRDMRKTSEQVIQERLAALEPAPGVYLMKDAQGRV-IYVGKASSLRQRLRSYFSSHSS 62 Query: 69 ---DEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR 125 ++ Q I T AL+LE LIK +P FN LR ++ +++ + Sbjct: 63 MDAKTRELVSQIADFEVIRTDTPTEALILENELIKRYRPRFNIMLRDDKTYPFIRITNEP 122 Query: 126 VDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSA 185 V A FG + + A + L + + + + RAC Sbjct: 123 FPRVIATRRIVRDGSRYFGPYPSAGAVHRTLDLLKRLFPYRACDIEITGTA-SRACLYYH 181 Query: 186 LKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWL 245 + RCAG C G S EE+ + + L + M + + Sbjct: 182 IGRCAGPCIGAVSQEEYRGIIDNVVLFLEGRAEAV-----VARLQAAMEEAAERLEFERA 236 Query: 246 GAVNSLEEATTLIRTPAGF----DHDGYKILCKPLLSGNYEI 283 + A + D + G+ + Sbjct: 237 ARIRDELRAIQHVLQQQKIVTGTDESFDVLAVAQSAGGDACV 278 >UniRef50_Q5X1P5 UvrABC system protein C n=7 Tax=Gammaproteobacteria RepID=UVRC_LEGPA Length = 618 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 69/285 (24%), Positives = 108/285 (37%), Gaps = 21/285 (7%) Query: 20 YPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLR 75 L FL LP+ PG+Y E T+ LY+GK+ N++ RV S+ A++ Sbjct: 6 LSAELALFLTKLPSEPGIYRMLDEEGTV-LYVGKAANLKKRVNSYFSKQNTGVKTRALVS 64 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKE- 133 Q + I T E ALLLE+ LIK +P +N LR ++ + L+ + Sbjct: 65 QIKSIEISVTRSETEALLLESNLIKALRPKYNVLLRDDKSYPYIHLSNHPDFPRIELYRS 124 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 + N FG + A + + TI K+ +R R C + +KRC C Sbjct: 125 KKKPPSGNFFGPYPGVAAVRETIVTIQKIFKIRNC-RDSYFKARSRPCLQYQIKRCTAPC 183 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 S E + L + ++ L+ C + L M Q N+ + + Sbjct: 184 VHYISPENYKLSVEDAIRFLQGKC-----QIILDALAERMKQAVNQLNFEEAAVLRDQIK 238 Query: 254 ATTLIRTPAGF-----DHDGYKILCKPLLSGNYEITELDPANDQR 293 LI+ G D D I +P G I + Q Sbjct: 239 NLRLIQEQQGVVQLRGDADVIAIEVRP---GFACIQCVTIREGQV 280 >UniRef50_Q1MQH2 UvrABC system protein C n=3 Tax=Desulfovibrionaceae RepID=UVRC_LAWIP Length = 621 Score = 257 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 105/276 (38%), Gaps = 22/276 (7%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQSRR 79 R + +PT PGVYL+ + +Y+GK+ N+R RVLS+ R P AM+ + Sbjct: 3 RPHPSSIPTTPGVYLYKDSQGRI-IYVGKARNLRKRVLSYFRDGLVITPKTKAMMNHANL 61 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK-RVDVVYAKEVDFSR 138 + I T E ALLLEA LIK+ +P +N LR ++Q ++ + + + Sbjct: 62 LETISTNTEKEALLLEASLIKKHRPRYNIVLRDDKQYLLFRIQKGIPFPRLEIVRQSYKD 121 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG F + + + I L +R R C L++C C + Sbjct: 122 NAVYFGPFTSGTSVRDTWKFIHKIFPLRRC-SDKVFNNRIRPCLYFYLQQCLAPCTEEVD 180 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 +++A+ +++ L ++ +M + + +A Sbjct: 181 PKDYAVLIQKVELFLSGKSKEL-----VELLQKDMLYASEALEFEKAATLRDQIQAIK-- 233 Query: 259 RTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRA 294 H + G+ ++ + N+ A Sbjct: 234 -------HTIERQSVVLPEGGDMDVIGIAVVNNGLA 262 >UniRef50_C0ZZE8 UvrABC system protein C n=14 Tax=Actinomycetales RepID=UVRC_RHOE4 Length = 730 Score = 256 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 96/284 (33%), Gaps = 23/284 (8%) Query: 19 EYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAM 73 P R +P PGVY F + +Y+GK+ ++RSR+ S+ P M Sbjct: 2 PDPSTYRPATGTIPAAPGVYKFRDPHGRV-IYVGKAKSLRSRLNSYFADVTTLHPRTRQM 60 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAK 132 + + + W + E+ AL LE IKE P FN R R ++ L + + ++ Sbjct: 61 VTTAGSVEWTVVSTEVEALQLEYNWIKEFDPRFNVRYRDDKTYPVLAVTLNEEFPRLFVY 120 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLG--LEPLSRGRACFRSALKRCA 190 + FG +++ A + L + G GR C + +C+ Sbjct: 121 RGPRRKGVRYFGPYSHAWAIRETLDLLLRVFPARTCSSGVFKRHNQIGRPCLLGYIDKCS 180 Query: 191 GACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS 250 C G+ S EEH + + L +K+ M Q ++ + Sbjct: 181 APCVGRVSAEEHRQIVEDFCDFLAGRTDKL-----VKDLEKRMQQASEDLDFETAARLRD 235 Query: 251 LEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRA 294 A K + ++ + + A Sbjct: 236 DIGALRKALE---------KQAVVLGDGTDADLVAFATDDLEAA 270 >UniRef50_Q0BPX7 UvrABC system protein C n=43 Tax=Alphaproteobacteria RepID=UVRC_GRABC Length = 644 Score = 256 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 113/296 (38%), Gaps = 22/296 (7%) Query: 3 RRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVL 62 + +P L A + + + L LP RPGVY LY+GK+ +++ RV Sbjct: 12 KEADNPSLPIVEAPPGKGVTVIEAMLKLLPDRPGVYRMLDGQGE-ALYVGKARSLKKRVA 70 Query: 63 SHLR----TPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCA 118 S+ + M+ ++ + + T E ALLLEA LIK +P FN LR ++ Sbjct: 71 SYTQIHRLPERLRRMVSETVSMEIVTTHTEAEALLLEANLIKRLKPRFNIVLRDDKSYPW 130 Query: 119 LQLNEKR-VDVVYAKEVDF-SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS 176 L L E + +A + +G FA+ A Q + + L + Sbjct: 131 LMLTEDHAFPQIMKHRGAQTRKAASYWGPFASAWAVNQTVTAMQRIFLLRSC-SDSVFAN 189 Query: 177 RGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQY 236 R R C ++RC+ C + S E++A + Q+ L G ++ +M Q Sbjct: 190 RSRPCLLFQIRRCSAPCVDRISQEDYAELVDQARAFLSGR-----GTEIQRDLARQMEQA 244 Query: 237 HIIQNWLWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 + A+ T ++ A + P GN ++ + Q Sbjct: 245 AEALEFERAAAIRDRIRGLTHVQGTA---------VVNPASIGNADVIAVWQDAGQ 291 >UniRef50_A5WBX3 UvrABC system protein C n=3 Tax=Psychrobacter RepID=UVRC_PSYWF Length = 614 Score = 256 bits (653), Expect = 9e-67, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 108/293 (36%), Gaps = 21/293 (7%) Query: 12 FEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT---- 67 A + L+ + LP PGVY G++ + LY+GK+ +++SRV S+ Sbjct: 5 SLTAQADDKQARLKHLIKRLPNLPGVYKMLGKNGDI-LYVGKAKSLKSRVNSYFAKTIDH 63 Query: 68 PDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV- 126 P A++ + I I T E ALLLE LIKE +P +N LR ++ + ++ + Sbjct: 64 PKTRALVSRIHDIETIITRSETEALLLEQNLIKEHRPPYNVLLRDDKSYLYVFISADQPY 123 Query: 127 DVVYAKEVD-FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSA 185 + + FG F + AA + L + ++ R R C Sbjct: 124 PRLAYGRGKAKHQKGKFFGPFPSAHAAKETLVLMQKMFQMRQCT-NTFFRQRKRPCLEYQ 182 Query: 186 LKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWL 245 +KRC C G S EE+A ++ ++ L+ + +M ++ Sbjct: 183 IKRCRAPCVGLVSAEEYAADVQNTIRFLKGDSSDIHTTLI-----EKMEHSAEALDFEKA 237 Query: 246 GAVNSLEEATTLIRTPAGF-----DHDGYKILCKPLLSGNYEITELDPANDQR 293 +++ + D I +G + L + Sbjct: 238 AFYRDQLSMLREVQSRQAVYTVQGEADIISIAS---QAGMTCVNVLTVRGGRV 287 >UniRef50_D1VGT9 Excinuclease ABC, C subunit n=1 Tax=Frankia sp. EuI1c RepID=D1VGT9_9ACTO Length = 835 Score = 256 bits (653), Expect = 9e-67, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 97/282 (34%), Gaps = 23/282 (8%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLR 75 P R +P PGVY F + LY+GK+ N+R+R+ ++ P M+ Sbjct: 4 PASYRPAPGSIPETPGVYRFRDPHGRV-LYVGKAKNLRARLNNYFTDVFALHPRTRTMVT 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + + W + E+ AL LE IKE P FN R R ++ +L + ++ + Sbjct: 63 TASSVEWTVVSTEVEALALEYTWIKEYDPRFNVRYRDDKSYPSLAVTLQEEFPRLQVMRG 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGL--LGLEPLSRGRACFRSALKRCAGA 192 + FG +A+ A + L + + GR C + RC+ Sbjct: 123 PKRKGVRYFGPYAHAWAIRETLDLLLRVFPARTCSTGVFKRAGQVGRPCLLGYIDRCSAP 182 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C G+ + +EH + + + + L+ EM Q++ + Sbjct: 183 CVGRVTPDEHRQIVDDFCDFMAGQTGRF-----LRRLEDEMRAAADAQDYERAARLRDDA 237 Query: 253 EATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRA 294 A K + ++ + A Sbjct: 238 GALR---------RAMEKQAVVLADGTDADVVAFAQDELEAA 270 >UniRef50_B3QRR8 Excinuclease ABC, C subunit n=3 Tax=Bacteria RepID=B3QRR8_CHLT3 Length = 640 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 109/280 (38%), Gaps = 21/280 (7%) Query: 9 RLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT- 67 E + + E L+ L +LPT PGVY F + + + +Y+GK+ N+R+RV S+ R Sbjct: 15 PNENGETSEKKLSEALQFKLKNLPTSPGVYQFKDKDERV-IYVGKAKNLRARVQSYFRNL 73 Query: 68 ----PDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE 123 ++R+ + I T E+ AL+LE LIK+ +P +N L+ ++ + + Sbjct: 74 SEHSGKTRLLVRRIMDLELILTGTEVEALILENNLIKQLKPRYNINLKDDKSYPYIVVTN 133 Query: 124 KRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL----SRGR 179 + V+ +G + R L I++ ++ L + + + Sbjct: 134 EPFPRVFPTRNVRRDGSKYYGPYTETRQMRMLLDAISEIFQVRSCSLNMTDENIAARKFK 193 Query: 180 ACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHII 239 C +K+C G C +S E++ + + + LR ++ M Y Sbjct: 194 VCLDYHIKKCLGPCEALQSREDYDAMIDEVKKLLRGKT-----KDIVRSLESRMKNYAKE 248 Query: 240 QNWLWLGAVNSLEEATTLIRTPAG------FDHDGYKILC 273 + + + EA D D + + Sbjct: 249 LKFEYAAEIKRQLEALERYSARQKVLTTDEIDRDIFAVAR 288 >UniRef50_C9KP10 Excinuclease ABC subunit C n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KP10_9FIRM Length = 623 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 54/245 (22%), Positives = 96/245 (39%), Gaps = 17/245 (6%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSRRI 80 L LP PGVY+ + + +Y+GK+V +++RV + +P AM+ Sbjct: 7 EKLKLLPDSPGVYIMKDANGRI-IYVGKAVVLKNRVRQYFQHNKNHSPKVKAMVSHIADF 65 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRA 139 I T E+ AL+LE LIK+ +P +N L+ ++ +++ ++ V+ Sbjct: 66 EIIMTHSEVEALILECNLIKKHRPHYNISLKDDKSYPYVKVTVQEEYPRVFLTHRVTKDG 125 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 FG + + A Q+L+ + L + R C +KRC C GK + Sbjct: 126 ARYFGPYTDVTAVHQSLKLLRKLFPLRTCR-----HLQERPCLEYHIKRCLAPCVGKVTE 180 Query: 200 EEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIR 259 E++A +R L L + +E M Q ++ + A I Sbjct: 181 EDYAAMIRAVLLFLEGRTADVE-----RELKVRMEQAAEAFHFETAARLRDQLRAVQKIA 235 Query: 260 TPAGF 264 Sbjct: 236 EKQNI 240 >UniRef50_A1BED8 UvrABC system protein C n=12 Tax=cellular organisms RepID=UVRC_CHLPD Length = 631 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 104/296 (35%), Gaps = 27/296 (9%) Query: 5 LTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSH 64 + S L + P + LP+ PGVY F + +YIGK+ N+R+RV S+ Sbjct: 1 MDSNPLHHSNPPVGSLP---LDKVASLPSSPGVYQFKNAQGRV-IYIGKAKNLRNRVRSY 56 Query: 65 LRTP-----DEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCAL 119 R P M+ + I I T+ E+ AL+LE LIKE +P +N L+ ++ L Sbjct: 57 FRNPQQLFGKTLVMVGKIADIEVIITSSEVEALILENNLIKELKPRYNVNLKDDKTYPYL 116 Query: 120 QLNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGR 179 + + + FG + R L I + L L P + R Sbjct: 117 VITNEPFPRILVTRQVKKDGSTWFGPYTEARQLRSILDFIGSIFPIRSCKLRLSPENISR 176 Query: 180 ----ACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQ 235 C + +C G C G + EE+ L + + L+ ++ + M Sbjct: 177 GKFKVCLDYHIHKCKGPCEGLLTEEEYLLMIVEITRLLKGKTSA-----TIRSLNERMLS 231 Query: 236 YHIIQNWLWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPAND 291 + + L + + + ++ + ND Sbjct: 232 FAKELKFEQAA---------ELKTQIDSLKRYAERQKVVTSDTLDRDVFAVASRND 278 >UniRef50_UPI00017881F9 excinuclease ABC, C subunit n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017881F9 Length = 667 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 94/289 (32%), Gaps = 23/289 (7%) Query: 13 EAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPD 69 + E++R L LP +PG YL T+ +Y+GK+ +++RV S+ Sbjct: 7 RLQEQEKAQENIRHKLALLPDQPGCYLMKNHEGTI-IYVGKAKVLKNRVRSYFTGSHNGK 65 Query: 70 EAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVV 129 ++ + R +I T + AL+LE LIK QP FN L+ ++ L++ + + Sbjct: 66 TQMLVSEIRDFEYIVTGSNMEALILECNLIKTHQPRFNVLLKDDKTYPYLKITNEEHPRL 125 Query: 130 YAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRC 189 FG + N AA Q + + L + + C + +C Sbjct: 126 EVTRRVLKDKAKYFGPYPNAYAAQQTKKLLDRMYPLRKCGVMPKE-----VCLYYHMGQC 180 Query: 190 AGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVN 249 C + + + L + KE +M + + + Sbjct: 181 LAPCVKEVPKSAYEQITGEITSFLSGGHEEIK-----KELQRKMQEAAEDLYFERAKELR 235 Query: 250 SLEEATTLIRTPAGF------DHDGYKILCKPLLSGNYEITELDPANDQ 292 + D D + G + L + Sbjct: 236 DQIIHIDTLMEKQKITTTDTRDRDVFGYAVD---KGWMCVQILYMRQGK 281 >UniRef50_D1CFI6 Excinuclease ABC, C subunit n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFI6_THET1 Length = 613 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 104/279 (37%), Gaps = 17/279 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAAMLRQS 77 E + + L +P +PGVYL + + +Y+GK+ +R+RV S+ + M+ Q Sbjct: 8 EEIITRLQAIPEKPGVYLMKDKHGKV-IYVGKAKVLRNRVRSYFSSKHLPEKIREMVPQI 66 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDF 136 I +I T E AL LE LIK P +N + +++L +++ ++ V Sbjct: 67 HDIDYIVTDSEHEALTLEVTLIKHHMPKYNSMFKDDKRLPYIKVTVQEEFPRVLKCRQII 126 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 + +G + +A +A++ I LC+ + R C L RC GAC G+ Sbjct: 127 NDGSKYYGPYTALGSAAEAIKLIHQHFMLCHKENEPIDGKQSRPCLPYYLHRCLGACAGR 186 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 +E+ Q + L +M + + + +A Sbjct: 187 ADPQEYRAATEQVILFLEGKHDELTEK-----LRRKMEEAAENLEFEKAALYRNQIKAIE 241 Query: 257 LIRTPAGF------DHDGYKILCKPLLSGNYEITELDPA 289 IR D D I +G + D Sbjct: 242 DIRQRQKVVLPTNEDMDIISIALDGGEAGIERLFIRDGR 280 >UniRef50_Q313T1 UvrABC system protein C n=2 Tax=Desulfovibrio desulfuricans subsp. desulfuricans RepID=UVRC_DESDG Length = 700 Score = 254 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 59/270 (21%), Positives = 96/270 (35%), Gaps = 22/270 (8%) Query: 31 LPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQSRRISWICT 85 +PT PGVYL+ + + Y+GK+ ++R RV S+ R P AMLR + + + T Sbjct: 9 IPTTPGVYLYKDPAGKVV-YVGKAKHLRRRVASYFRDIQRHTPKTRAMLRSAATVETLST 67 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAPNLFG 144 E ALLLEA LIK+ +P +N LR ++Q QL + + FG Sbjct: 68 TTEKEALLLEASLIKKHRPRYNILLRDDKQYVLFQLTRKHHWPRLVLTRKVRKDGSAYFG 127 Query: 145 LFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHAL 204 F + +AA Q + I L +R R C + +C G C + + Sbjct: 128 PFTSGQAARQTWKVIHKVFPLRRC-SDKAFRNRVRPCLYHFMNQCPGPCVLDVDRDGYMQ 186 Query: 205 RLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPAGF 264 +R+ L + +M + + +A Sbjct: 187 MVRKVEMLLAGRSTEL-----IDMLRADMQAASDALEFEEAALLRDQLQAVE-------- 233 Query: 265 DHDGYKILCKPLLSGNYEITELDPANDQRA 294 + + + L A A Sbjct: 234 -RTVERQAAVLPGVHDMDAVGLAEAGGGLA 262 >UniRef50_C6NXT8 Excinuclease ABC subunit C n=2 Tax=Gammaproteobacteria RepID=C6NXT8_9GAMM Length = 624 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 114/290 (39%), Gaps = 21/290 (7%) Query: 8 PRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-- 65 + E I + P L+ FL L ++PGVY + LY+GK+ N++ RV S+ Sbjct: 5 VQARSERPEIQDEPFDLKLFLRSLGSQPGVYQMLAADGHI-LYVGKARNLKRRVSSYFQK 63 Query: 66 --RTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-N 122 +P AML Q R+ + T E AL+LEA+LIK+ +P +N LR ++ L + Sbjct: 64 TRHSPKTLAMLAQVARVEVLVTHTETEALVLEAQLIKKHRPHYNILLRDDKSYPYLYIDT 123 Query: 123 EKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACF 182 + + FG + A +++ + +L +R RAC Sbjct: 124 SSAFPRMSLHRGTQRGKGHYFGPYPAVSALRESMVLLQKAFRLRTCE-DSVFHNRSRACL 182 Query: 183 RSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNW 242 ++RC+G C G + + L+ +L L+ A++ M ++ Sbjct: 183 HYQIRRCSGPCVGHIDEKSYHRDLQDALRFLQGKSDE-----AIRTLQQRMLAAAERLDF 237 Query: 243 LWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 A + I+ + G++++ A+ Q Sbjct: 238 EEAARRRDQIAALSKIQE---------RQYVAQAGGGDFDVLAAVEADGQ 278 >UniRef50_Q0F271 Excinuclease ABC subunit C n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F271_9PROT Length = 611 Score = 253 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 57/241 (23%), Positives = 100/241 (41%), Gaps = 11/241 (4%) Query: 27 FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISW 82 L LP PGVY + + +Y+GK+ N+R RV S+ + +P AM+RQ R I++ Sbjct: 8 ALTALPREPGVYRMLDHARKV-IYVGKARNLRKRVSSYFQRQPESPRTIAMVRQVRDIAF 66 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNL 142 T E AL+LE LIK+ +P +N ++ ++ + L+++ + + + Sbjct: 67 SVTPSEAEALVLEHNLIKQLKPRYNVLMKDSKTYPYILLSDEPFPKLTMYRGNRTLPGEY 126 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 FG F N A Q L + L +R R C + + RC+ CC S ++ Sbjct: 127 FGPFPNAGAVHQTLHIMQSMFLLRDCE-DAVFNNRSRPCMQHQIGRCSAPCCDIVSKAQY 185 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPA 262 ++ + + LR LK +M Q + + A + + Sbjct: 186 RRQVDEVRQFLRGRDNDL-----LKGWEQQMQQAADAMQFEQAAILRDRIRALRSVLAGS 240 Query: 263 G 263 Sbjct: 241 E 241 >UniRef50_Q180Q8 UvrABC system protein C n=8 Tax=Clostridiales RepID=UVRC_CLOD6 Length = 605 Score = 253 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 112/278 (40%), Gaps = 22/278 (7%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE-----AAMLRQS 77 ++ L LP+ PGVYL + D + +Y+GK++++++RV + ++ +M++ Sbjct: 3 DIQEHLKKLPSEPGVYLMKDKYDHI-IYVGKAISLKNRVRQYFQSSKNHTSKVKSMVKNI 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDF 136 + +I T E+ AL+LE LIK +P +N LR ++ +++ + + Sbjct: 62 YKFEYIITDSELEALILECNLIKRYRPKYNVVLRDDKTYPYIKVTTNEDYPRILKVRRVL 121 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEP--LSRGRACFRSALKRCAGACC 194 FG + N A L+ I+ + + ++ ++ R C + +C G C Sbjct: 122 KDKAKYFGPYTNITAVNDTLELISSTYPIRSCKIDIDKAIKNKTRPCLNLHINKCLGPCT 181 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 G S EE+ + + + L ++ +M + + + ++ Sbjct: 182 GNVSKEEYGKMIEEIIMCLSGKEEKL-----MELLKEKMNESSMNFRFEEAAVYRDKIKS 236 Query: 255 TTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 + D + N ++ + A+++ Sbjct: 237 LEEMIQKQKIDATVSDL--------NQDVVAMARAHNE 266 >UniRef50_A4FBL9 UvrABC system protein C n=26 Tax=Actinomycetales RepID=UVRC_SACEN Length = 717 Score = 253 bits (646), Expect = 6e-66, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 97/283 (34%), Gaps = 25/283 (8%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLR 75 P R +P PGVY FH + +Y+GK+ ++RSR+ S+ P M+ Sbjct: 4 PSTYRPAPGTIPDAPGVYRFHDAEGRV-IYVGKAKSLRSRLSSYFADLSGLHPRTRQMVT 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + + W E+ AL LE IKE P FN R R ++ L + + +Y Sbjct: 63 TATGVRWTVVGTEVEALQLEYSWIKEYDPRFNVRYRDDKSYPVLAVTLHEDFPRLYVTRG 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGL--LGLEPLSRGRACFRSALKRCAGA 192 + FG +A+ A + L + + GR C + +C+ Sbjct: 123 PRRKGVRYFGPYAHAWAIRETLDMLLRVFPARTCSAGVFKRHSQIGRPCLLGYIGKCSAP 182 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C G+ +EH + + +++ EM Q + + Sbjct: 183 CVGRVDADEHRRIVEDFCDFFAGRTDTL-----IRKLDREMRQASEELEFERAARLRDDL 237 Query: 253 EATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRAS 295 EA K + ++ +D+ A+ Sbjct: 238 EALR---------RAMEKQAVVLGDGTDADVIAFA--DDELAA 269 >UniRef50_B8DRE6 Excinuclease ABC, C subunit n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DRE6_DESVM Length = 762 Score = 253 bits (646), Expect = 6e-66, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 103/273 (37%), Gaps = 27/273 (9%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----------TPDEAAML 74 + ++++P PGVYL+ + + LY+GK+ ++R R+ S+ R TP AML Sbjct: 3 KPVMSNIPDTPGVYLYKDAAGRI-LYVGKAKHLRKRIASYFREAAEGAPPPQTPKTLAML 61 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKE 133 RQ+ R+ + T E ALLLEA LIK+ +P +N LR ++Q +L + + Sbjct: 62 RQAERLDTLSTTTEKEALLLEASLIKKHRPRYNIVLRDDKQYVLFRLQKKHPYPRLDIVR 121 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 +G F + AA + I L +R R C + +C C Sbjct: 122 AVRRDGAQYYGPFTSAGAARATWKAIHRAFPLRRCT-DRALENRVRPCLYHFIGQCLAPC 180 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 EE+A +++ L G + EM + A+ Sbjct: 181 VFDVPREEYAALVQRVEMLLSGRSGELVG-----QLRTEMETASEALEFERAAALRDQIR 235 Query: 254 ATTLIRTPAGFDHDGYKILCKPLLSGNYEITEL 286 A + G+ ++ + Sbjct: 236 AVE---------RTVERQAAVLPGGGDLDVVGI 259 >UniRef50_B2FK26 UvrABC system protein C n=29 Tax=Proteobacteria RepID=UVRC_STRMK Length = 614 Score = 252 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 102/274 (37%), Gaps = 13/274 (4%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRI 80 ++F L T PGVY + DT+ LY+GK+ +R+RV S+ +M+ Q R+ Sbjct: 12 KAFAAQLSTAPGVYRMYAADDTL-LYVGKARALRNRVGSYFNGSPKNARIMSMISQIVRM 70 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 T E ALLLE +LIK P +N LR ++ + L + + + Sbjct: 71 DVTVTRSEAEALLLENQLIKSLSPRYNVSLRDDKTYPHVLLTREDWPRIALHRGPRAIPG 130 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG + A + L + KL +R R C + + RC+ C + Sbjct: 131 RYFGPYPGVTAVRETLNLMHKLFKLRSCE-DSVFRNRSRPCLQYQIGRCSAPCVELVAPA 189 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 E+A +R++ L +E +M + + L + ++T Sbjct: 190 EYAESVRRAALFLEGKSDELT-----RELGEQMQAASEALEFEQAARLRDLISSLRSMQT 244 Query: 261 PAGFDHDGYKI--LCKPLLSGNYEITELDPANDQ 292 D + L + + L + + Sbjct: 245 RQYVDGRAADLDVLAVAMQGSQACVLLLAFRDGR 278 >UniRef50_Q2NGT2 UvrABC system protein C n=4 Tax=Methanobacteriaceae RepID=UVRC_METST Length = 598 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 107/273 (39%), Gaps = 21/273 (7%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT------PDEAAMLRQSRRISW 82 +++P +PGVY+ H + D + +Y+GK+ ++SR+ S+ R P ++R + Sbjct: 7 DEVPQKPGVYIMHNKEDEV-IYVGKAKKLKSRLQSYFRDEDKLDRPKTQFLMRHFSYFEY 65 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNL 142 I T E AL+LEA LIK+ +P +N L+ +Q +++ + +Y + + Sbjct: 66 ILTNTEKEALILEANLIKKYRPHYNISLKDGKQYPYIKITNEDFPRIYITRNIVNDKASY 125 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 +G + + A + + ++ C +K+C+ C S EE+ Sbjct: 126 YGPYTDSTHARAFIDFLNKNFQIRTCK------HMDGPCLNYQIKQCSAPCVNYISQEEY 179 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPA 262 +R+ L+ +K+ +M +Y + + + + Sbjct: 180 NRNIRRVKLLLQGKY-----KTTIKKLKKDMNRYAKNMEFEKAAMLRDQIDTIKITLEKQ 234 Query: 263 GF--DHDG-YKILCKPLLSGNYEITELDPANDQ 292 + D I+ + + L + + Sbjct: 235 NIQPNQDVNQDIIGFDHNNEEAAVVILSVRSGK 267 >UniRef50_B5EPN1 Excinuclease ABC, C subunit n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EPN1_ACIF5 Length = 623 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 61/272 (22%), Positives = 106/272 (38%), Gaps = 21/272 (7%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAAMLRQSRRIS 81 FL L ++PG+Y G+ + LY+GK+ N+R RV S+ + P AML Q R+ Sbjct: 24 EFLRTLTSQPGIYQMFGQ-GSRLLYVGKARNLRRRVSSYFQKQRHTPKTLAMLAQVTRVE 82 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSRAP 140 + T E AL+LEA LIK P +N LR ++ L + + Sbjct: 83 VVVTHTETEALVLEANLIKRHHPPYNILLRDDKSYPYLFIETGHGTPRMSLHRGAQKGKG 142 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 + FG + A +++ + +L R RAC + ++RC+G C G S E Sbjct: 143 HYFGPYPAVTALRESMVLLQKAFRLRTCE-DHTFHHRSRACLQFQIRRCSGPCVGHISGE 201 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 ++A + ++ L A++ M ++ A + I+ Sbjct: 202 DYARDVADTIRFLEGKSDE-----AIRSLGERMQAAAEQLDFEEAARRRDQIAALSKIQE 256 Query: 261 PAGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 + G++++ N Q Sbjct: 257 ---------RQYVAQAGGGDFDVLAAAQENGQ 279 >UniRef50_A1WLD5 UvrABC system protein C n=17 Tax=Burkholderiales RepID=UVRC_VEREI Length = 685 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 105/294 (35%), Gaps = 28/294 (9%) Query: 20 YPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLR 75 + E L + + LP PGVY + + LY+GK+ +++ RV S+ M+ Sbjct: 2 HSEELLAQVAALPALPGVYRYFDSQG-LLLYVGKARHLKRRVASYFTKNHGGTRIGHMVC 60 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN------------E 123 + R+ E ALLLE LIK Q P FN R ++ L++ Sbjct: 61 KIARLETTVVRSEAEALLLENNLIKTQNPRFNILFRDDKSYPYLKITGAPASSAGRDAPG 120 Query: 124 KRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFR 183 +R + + FG + + A ++++ + +L +R R C Sbjct: 121 QRFPRIAYYRGAVDKQHRYFGPYPSAWAVKESIELLQKVFRLRTCE-DTVFANRTRPCLL 179 Query: 184 SALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWL 243 +KRC+G C + E +A+ ++ + L L+ M Y + Sbjct: 180 YQIKRCSGPCVNLIAPEAYAVDVQHAQALLSGQTQEL-----LQAMEARMMAYSGQLAFE 234 Query: 244 WLGAVNSLEEATTLIRTPAGF----DHDGYKILCKPLLSGNYEITELDPANDQR 293 V + +A + + D D IL + G + + Sbjct: 235 QAAEVRNQMQALSRVLHQQSIESAHDKDV-DILAVRVQGGRACVNLAMVRGGRH 287 >UniRef50_B8I8F2 UvrABC system protein C n=2 Tax=Clostridium RepID=UVRC_CLOCE Length = 613 Score = 252 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 104/281 (37%), Gaps = 16/281 (5%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQS 77 ++ L LP + GVY+ + + +Y+GK+V +++RV + P AM+ + Sbjct: 3 DIQEELKKLPDKSGVYIMKDANG-VVIYVGKAVVLKNRVRQYFQQSANHPPKVQAMVSKV 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDF 136 +I E+ AL+LE LIK+ +P +N L+ ++ +++ + + Sbjct: 62 SEFEYIVVDSEVEALMLECTLIKKYKPKYNILLKDDKHYPYIKVTLNEEYPRILKTRRVE 121 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGL-EPLSRGRACFRSALKRCAGACCG 195 FG +++ A + T+ L L + + R C +K+C C G Sbjct: 122 KDGARYFGPYSSGFAVNDTIDTLKKLFSLKTCNKNLPRDIGKTRPCLNYHMKQCLAPCQG 181 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 + +E+ +++ L + + +M ++ + + + Sbjct: 182 GVNRDEYREMMKKICRFLGGQYDE-----IINDLRIQMETAAEQLDFEKAAQLRNKITSI 236 Query: 256 TLIRTPAGF---DHDGYKILCKPLLSGNYEITELDPANDQR 293 + D + I+ S + I N + Sbjct: 237 KQLSESQKVLFTDLEDRDIIGYSADSTDLCIQVFFVRNGRV 277 >UniRef50_C9LR57 Excinuclease ABC subunit C n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR57_9FIRM Length = 625 Score = 252 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 106/278 (38%), Gaps = 28/278 (10%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQSR 78 +R+ ++ LP PGVY + + + +Y+GK+VN+++RV S+LR AM+R + Sbjct: 8 IRAKVDALPDSPGVYRWKDKDGRV-IYVGKAVNLKNRVRSYLREDKNRSPKVAAMIRHAA 66 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV-DF 136 + TA E+ AL+LE LIKE P +N LR ++ +++ ++ + Sbjct: 67 DLDITMTATEMEALILECNLIKELHPKYNISLRDDKSYPYVKITVNEKWPRILVTRNIRR 126 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 FG F + + + L I + + R C + + C C Sbjct: 127 DDGAKYFGPFTDVGSLRKTLSLIRRLYPIRTCRS----MKVSRPCLQYHMNLCCAPCWNH 182 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 + E++ + ++ + +K +M N+ + A Sbjct: 183 CTEEQYHEYVVKTCDLFEGKNTEL-----VKALQKDMESASEEMNFERAAVLRDQLHAVQ 237 Query: 257 LIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRA 294 ++ G++++ + D+ A Sbjct: 238 SVQQRQNI----------VSKEGDFDVVGM-SRLDEHA 264 >UniRef50_A5EW70 UvrABC system protein C n=1 Tax=Dichelobacter nodosus VCS1703A RepID=UVRC_DICNV Length = 607 Score = 252 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 63/266 (23%), Positives = 107/266 (40%), Gaps = 14/266 (5%) Query: 27 FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISW 82 FL+ + T GVY ++ T+ LY+GK+ N+R R+ + + + A++R I Sbjct: 13 FLSHVSTLSGVYQMRDQNGTV-LYVGKAKNLRQRLSHYFQKTGLSVKTRALMRAVYDIQT 71 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNL 142 T E ALLLE LIK+ QP FN LR ++ + L++ ++ + + Sbjct: 72 TSTPTEAEALLLENNLIKQYQPKFNILLRDDKSYPYICLSQHDFPRLFLYRGAR-KNGDF 130 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 FG + N ++A AL + +L L +R R C + +KRC C GK S E + Sbjct: 131 FGPYPNVQSAHHALAILQKVFRLRPC-LDSFFKNRSRPCLQYQIKRCYAPCVGKISAEMY 189 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPA 262 A ++ + + L L+ M Q Q + V I+ Sbjct: 190 AQTVQHARDFLTGNSEHL-----LQTLTEHMLQASAAQQYERAAIVRDQISELRTIQQKQ 244 Query: 263 GFDHDGYKILCKPLLS--GNYEITEL 286 + + + G + L Sbjct: 245 SMVVYAANVDVLAVATAYGKACVQVL 270 >UniRef50_C1B4L2 UvrABC system protein C n=10 Tax=Actinomycetales RepID=UVRC_RHOOB Length = 743 Score = 252 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 92/274 (33%), Gaps = 20/274 (7%) Query: 19 EYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAM 73 P R +P PGVY F + +Y+GK+ ++RSR+ S+ P M Sbjct: 2 PDPSTYRPATGTIPVDPGVYKFRDPHGRV-IYVGKAKSLRSRLNSYFADVSTLHPRTRQM 60 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAK 132 + + + W + E+ AL LE IKE P FN R R ++ L + + ++ Sbjct: 61 VTTAGSVEWTVVSTEVEALQLEYNWIKEFDPRFNVRYRDDKTYPVLAVTLNEEYPRLFVY 120 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGL--LGLEPLSRGRACFRSALKRCA 190 + FG +++ A + L + + GR C + +C+ Sbjct: 121 RGPRRKGVRYFGPYSHAWAIRETLDLLLRVFPARTCSAGVFKRHNQIGRPCLLGYIDKCS 180 Query: 191 GACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS 250 C G+ S EH + + L +++ M Q ++ + Sbjct: 181 APCVGRVSAAEHRKIVEDFCDFLSGRTDKL-----VRQLEARMQQASEELDFETAARLRD 235 Query: 251 LEEATTLIRTPAGF------DHDGYKILCKPLLS 278 A D D L + Sbjct: 236 DVGALRRALEKQAVVLGDGTDADVAAFATDELEA 269 >UniRef50_Q3IYX6 UvrABC system protein C n=23 Tax=Alphaproteobacteria RepID=UVRC_RHOS4 Length = 623 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 117/294 (39%), Gaps = 18/294 (6%) Query: 10 LEFEAAAIYEYP---EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR 66 ++ + P ++ +L L PGVY + LY+GK+ N+R+RV ++ R Sbjct: 1 MQDNETDGRDVPTGHAVIQGYLKTLDGSPGVYRMLDAQSQV-LYVGKARNLRARVSNYAR 59 Query: 67 ----TPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL- 121 + A M+R++ + ++ T E ALLLE LIK+ +P +N LR ++ + + Sbjct: 60 PSGHSGRIARMIRETASMMFLTTRTETEALLLEQNLIKQLKPRYNVLLRDDKSFPNILIA 119 Query: 122 NEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRAC 181 + ++ S + FG FA+ A + L + L SR R C Sbjct: 120 KDHPFPMLKKHRGKKSEKGSYFGPFASAGAVNRTLNQLQRVFLLRTC-SDATFESRTRPC 178 Query: 182 FRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQN 241 +KRC+ C G+ E++A + + L+ Q +M Sbjct: 179 LLFQIKRCSAPCVGRVPAEDYAELIGDAERFLQGRTTKVQAN-----LAEQMQAASEAME 233 Query: 242 WLWLGAVNSLEEATTLIRTPAGFDHDG---YKILCKPLLSGNYEITELDPANDQ 292 + A+ +A T +++ G + G ++ L G + +Q Sbjct: 234 FERAAALRDRIKALTQVQSSQGINPRGVAEADVIAVHLEGGQACVQVFFIRANQ 287 >UniRef50_Q72DX8 UvrABC system protein C n=3 Tax=Desulfovibrio vulgaris RepID=UVRC_DESVH Length = 688 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 99/264 (37%), Gaps = 22/264 (8%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQSRR 79 R L+ +P PGVYL+ ES + +Y+GK+ +R RV S+ R P AMLR + Sbjct: 3 RPDLSTIPLTPGVYLYKDESGRI-IYVGKARCLRRRVASYFRDVSALTPKTVAMLRHAVT 61 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSR 138 I + T E ALLLEA LIK+ +P +N LR ++Q ++ + + Sbjct: 62 IDTLSTTTEKEALLLEASLIKKHRPRYNIVLRDDKQYVLFRIGAKHPYPRLEIVRKARRD 121 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG F + AA + +TI L +R RAC + +C G C + Sbjct: 122 DGRYFGPFTSASAARETWKTIHRAFPLRRC-SDRAFGNRVRACLYHHMGQCLGPCVNEVP 180 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 E +A L Q L A EM ++ + A Sbjct: 181 SETYAALLEQVSLLLSGRSGELVDA-----LRTEMEAASQGLDFERAAVLRDRIRALE-- 233 Query: 259 RTPAGFDHDGYKILCKPLLSGNYE 282 + G+ + Sbjct: 234 -------RTVERQAAVLPGGGDLD 250 >UniRef50_D2RIL8 Excinuclease ABC, C subunit n=3 Tax=Veillonellaceae RepID=D2RIL8_ACIFE Length = 618 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 59/270 (21%), Positives = 102/270 (37%), Gaps = 26/270 (9%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSR 78 ++ L LP PGVY+ H S + +Y+GK+V +++RV S+ R +P A+ Sbjct: 5 IKETLAVLPNAPGVYIMHDASGKV-IYVGKAVILKNRVRSYFRPASQVSPKVRAINAHVA 63 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS 137 I I TA E+ AL+LE LIK+ +P +N L+ ++ L++ + + Sbjct: 64 SIETIVTASEMEALILECNLIKKYRPRYNIDLKDDKTYPYLKITVGEAYPRMVLTRRVLK 123 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 +G FA+ A ++ I L + L+ R C + L RC C GK Sbjct: 124 DGARYYGPFADAGALRDTMKLIRTMFPLRHC----RNLNAKRPCLQYHLHRCLAPCTGKV 179 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 E+ + L L + K+ +M Q + + Sbjct: 180 PVSEYRQMVDAVLLLLDGKVTQLE-----KDLTAKMQQASDNLEFEAAARYRDSLLSLRK 234 Query: 258 IRTPAGFDHDGYKILCKPLLSGNYEITELD 287 + SG+ ++ L Sbjct: 235 LAEKQK----------ATTESGDRDVVGLA 254 >UniRef50_Q0A8X6 UvrABC system protein C n=19 Tax=Gammaproteobacteria RepID=UVRC_ALHEH Length = 611 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 97/260 (37%), Gaps = 17/260 (6%) Query: 19 EYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----ML 74 P ++F+ L RPGVY + LY+GK+ N++ RV S+ ++A ML Sbjct: 5 PSPFDPKAFVRSLTQRPGVYRMVDGRGEV-LYVGKARNLKKRVASYFTRSRKSARIELML 63 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK-RVDVVYAKE 133 Q + I T E AL+LE LIKE +P +N LR ++ + L+ + Sbjct: 64 TQVQDIQVTVTHTEAEALILENTLIKELRPRYNVLLRDDKSYPWIYLSSHQDFPRLSFHR 123 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 FG F + A + L T+ ++ +R R C + +KRC C Sbjct: 124 GARKGPGRWFGPFPSGHAVRETLNTLQKVFRIRQCQ-DSFFSNRSRPCLQHQIKRCTAPC 182 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 G S E + +R ++ L ++E M + + Sbjct: 183 VGYISREAYQEDVRHAVLFLEGRSNQV-----IEELGARMEAASERLEFEAAAQYRDRIQ 237 Query: 254 ATTLIRTPAGF-----DHDG 268 A ++ D D Sbjct: 238 ALQAVQERQYIVGEKGDLDV 257 >UniRef50_Q2G9G8 UvrABC system protein C n=2 Tax=Sphingomonadales RepID=UVRC_NOVAD Length = 658 Score = 251 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 115/298 (38%), Gaps = 28/298 (9%) Query: 2 VRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRV 61 +R P +E A +R + L +PGVY + LY+GK+ +++RV Sbjct: 38 LRGADRPDIELGAGV-------IRETVQTLKPKPGVYRMLDARGDV-LYVGKARALKNRV 89 Query: 62 LSHLR----TPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLC 117 ++ + M+ Q+R ++ + T E ALLLEA+LIK +P +N LR ++ Sbjct: 90 ANYTQVERLPNRLRRMVSQTRSMTIVTTNSEAEALLLEAQLIKRFRPPYNVLLRDDKSFP 149 Query: 118 ALQLNEKR-VDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS 176 + L + N +G FA+ + + + L G Sbjct: 150 FILLRGDHAFPRISKHRGARKAKGNYYGPFASAGSVNTTINALQKLFLLRSCNDGF-MAR 208 Query: 177 RGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQY 236 R R C ++RC+ C G+ S ++ +RQ+ + L Q +E +M + Sbjct: 209 RDRPCLLYQIRRCSAPCVGRISEADYGELVRQAKDFLGGKSGAVQ-----REIEAQMHKA 263 Query: 237 HIIQNWLWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRA 294 ++ + A T I+ + +G GN ++ + Q A Sbjct: 264 AEDLDFERAAMLRDRLRAATFIQGSQAINAEG---------VGNADVFAMATKGGQVA 312 >UniRef50_Q2JCI3 UvrABC system protein C n=12 Tax=Actinomycetales RepID=UVRC_FRASC Length = 705 Score = 251 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 94/282 (33%), Gaps = 23/282 (8%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLR 75 P R +P PGVY F E + LY+GK+ N+R+R+ ++ P M+ Sbjct: 4 PASYRPAPGSIPETPGVYRFRDEHGRV-LYVGKAKNLRARLANYFAELHTLHPRTQHMVS 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + + W + E+ AL LE IK+ P FN R R ++ +L + + + Sbjct: 63 SASSVDWTVVSTEVEALQLEYTWIKQFDPRFNVRYRDDKSYPSLAVTLHEEFPRLQVMRG 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGL--LGLEPLSRGRACFRSALKRCAGA 192 + FG +A+ A + L + + GR C + RC+ Sbjct: 123 PKRKGVRYFGPYAHAWAIRETLDLLLRVFPARTCSGGVFKRAAQVGRPCLLGYIDRCSAP 182 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C G+ H + + + + L+ EM Q Q + + Sbjct: 183 CVGRVDAATHREIVEDFCDFMSGQTGRY-----LRRLEREMQQAAQAQEYERAARLRDDI 237 Query: 253 EATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRA 294 A K + ++ + A Sbjct: 238 GALR---------RAVEKQAVVLPDGTDADVIAFAEDELEAA 270 >UniRef50_Q2SF17 UvrABC system protein C n=47 Tax=Proteobacteria RepID=UVRC_HAHCH Length = 612 Score = 251 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 96/261 (36%), Gaps = 14/261 (5%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLRQSRRI 80 +SFL L TRPGVY + LY+GK+ N+++RV S+ R A++ + I Sbjct: 10 KSFLKQLTTRPGVYRMMDARGEV-LYVGKARNLKNRVSSYFRNTGVSIKTRALVEKIADI 68 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYA---KEVDFS 137 T E ALLLE LIK +P +N LR ++ + L+ + Sbjct: 69 EITITHSETEALLLEQNLIKTLKPPYNILLRDDKSYPYIYLSSHDEYPSLTFRRVRQKKT 128 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG + + A ++L + ++ +R R C + + RC+ C G Sbjct: 129 GKGRFFGPYTSAAAVRESLALLQKIFRIRQCE-DSFFSNRSRPCLQHQIGRCSAPCVGLI 187 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + +A + + L + E +M ++ + + Sbjct: 188 DPQSYAEDMSHATMFLEGR-----NPEIINETIQQMEVASAQLDFERAAVLRDQVDYLRR 242 Query: 258 IRTPAGFDHDGYKILCKPLLS 278 ++ + I L S Sbjct: 243 VQEQQAIEGVARDIDAFALSS 263 >UniRef50_A2RLW6 UvrABC system protein C n=11 Tax=Bacilli RepID=UVRC_LACLM Length = 669 Score = 251 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 96/257 (37%), Gaps = 20/257 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSR 78 + +++ L LP PG YL ++ T+ +Y+GK+ N+++RV S+ ++ + Sbjct: 3 QTIKAKLELLPDSPGCYLHKDKNGTV-IYVGKAKNLKNRVRSYFHGSHNTKTELLVSEIE 61 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 + WI I +L+LE LI+ +P +N L+ ++ L++ ++ + Sbjct: 62 DLEWIVVGSNIESLVLEINLIQRYKPKYNIMLKDDKYYPFLKITNEKYPRLLVVRKVQKD 121 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG + + +AA + + + L + CF + +C Sbjct: 122 GATYFGPYPDVKAANEVKRLLDRIFPFRKCGL-----HEKKVCFYFHIHQCLCPVVNHVD 176 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 + + ++ E L +KE +M + + +A + Sbjct: 177 PQVYKDMTQEVKEFLTG-----SDKKIVKELEGKMISASDNMEFEQAAEYRDVIKAIGTL 231 Query: 259 RTPAGF------DHDGY 269 RT D D + Sbjct: 232 RTKQRVMNQDLKDRDVF 248 >UniRef50_Q03F33 UvrABC system protein C n=7 Tax=Firmicutes RepID=UVRC_PEDPA Length = 594 Score = 250 bits (639), Expect = 3e-65, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 96/247 (38%), Gaps = 14/247 (5%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQS 77 EH+ L LP +PG Y + + +Y+GK+ N+++RV S+ ++ A ++ + Sbjct: 3 SEHIEHKLALLPDKPGCYQMKNLNSQI-IYVGKAKNLKNRVRSYFKSSHEGKTAKLVSEI 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 +I T+ + A LLE LI++ QP +N +L++ +++ ++ + Sbjct: 62 ADFDYIVTSSDKEAFLLEITLIQKFQPYYNIKLKKGTGYPYIKITNEKDPRMEIVSSVRR 121 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG + N AA + L + L +GR C + +C GAC + Sbjct: 122 DGGFYFGPYPNVYAAEETLHFLEKVYPLRRCNGF-----QGRPCLYYHMGQCLGACFQEV 176 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 EE+ ++ + LR + + +M + + + + Sbjct: 177 PKEEYDQQIAKIKSFLRGNVAKIKQS-----LQTKMQKASEAMEFERAADIRDQIHYIEV 231 Query: 258 IRTPAGF 264 Sbjct: 232 TVEKQKI 238 >UniRef50_B0VH58 Excinuclease ABC, C subunit n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VH58_9BACT Length = 601 Score = 250 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 103/274 (37%), Gaps = 20/274 (7%) Query: 17 IYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAA 72 + + E + + L LP +PGVYL+ + T+ +YIGK++N++ R+ ++L Sbjct: 1 MPAFSEEIETKLALLPEQPGVYLWKDKDGTI-IYIGKALNLKHRIKNYLNPAGKDLKTEH 59 Query: 73 MLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYA 131 +++ + +I T E A +LEA L+K +P +N L+ +++ +++ + ++ Sbjct: 60 LIKNIADLDYIITNSEADAFILEATLVKRYRPKYNIMLKDDKRYPFVKITVNEPFPRIFI 119 Query: 132 KEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAG 191 FG + R L+ + L + + + C L +C Sbjct: 120 TRELLKDNAKYFGPYTEVRYLRNTLRDLEWIFPLRSCNRNIPKIKYKQPCMNFQLGKCPA 179 Query: 192 ACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSL 251 C G S + +A + Q L L E EM + G Sbjct: 180 PCIGNISQKNYAKTVNQLLRFFNGRYTEL-----LDELRTEMQNASAELRFEEAGKFRDR 234 Query: 252 EEATTLIRTPAGFDHDGYKILCKPLLSGNYEITE 285 A I+ + + GN +I Sbjct: 235 IIAIERIQK---------RQSVFNVEGGNIDIIG 259 >UniRef50_A0LHP7 Excinuclease ABC, C subunit n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHP7_SYNFM Length = 677 Score = 250 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 62/271 (22%), Positives = 113/271 (41%), Gaps = 13/271 (4%) Query: 5 LTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSH 64 LT+ + A + L S P PGVYLF S + LY+GK++++R R+ S+ Sbjct: 49 LTADAQAPDGAVPCDDSPSLLSKTASFPHLPGVYLFKDASGAV-LYVGKAIDLRKRIASY 107 Query: 65 LRTP-----DEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCAL 119 ++ A++ ++ + ++ T+ E ALLLEA LIK+ +P +N LR ++ AL Sbjct: 108 FKSTGPIPVKTRALMGKAADMEYVVTSNEKEALLLEASLIKKHRPRYNVVLRDDKNYPAL 167 Query: 120 QLN-EKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRG 178 +++ + + FG + + A + L+ + L G L+R Sbjct: 168 RIDPREPFPRLEVVRRFQRDGALYFGPYHSAYALRETLRLLHQLFPLRLCK-GKRLLARE 226 Query: 179 RACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHI 238 R C +L RC GAC G+ S E++ + + + L+ V ++ M Sbjct: 227 RPCLNYSLGRCLGACAGRVSPEDYHKMVDEVVLFLQGKTD-----VLQQQLRRRMADAAE 281 Query: 239 IQNWLWLGAVNSLEEATTLIRTPAGFDHDGY 269 N+ + + D + Sbjct: 282 ALNFELAAYYRDRLQGIASMLEKQHIVSDRF 312 >UniRef50_C1FMJ8 UvrABC system protein C n=14 Tax=Clostridium RepID=UVRC_CLOBJ Length = 618 Score = 249 bits (637), Expect = 6e-65, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 85/249 (34%), Gaps = 13/249 (5%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQS 77 L L +LP +PGVYL + +Y+GK+ +++RV + + AM++ Sbjct: 3 DLEYQLKNLPDKPGVYLMKNNLGEI-IYVGKAKILKNRVRQYFQKSQKHSEKVKAMVKNI 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDF 136 +I T EI AL+LE LIK+ +P +N L+ ++ +++ + V + Sbjct: 62 EEFEYIITDSEIEALILECNLIKKYRPKYNILLKDDKHYPFIKVTLAEDFPRVVSTRKVT 121 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGL-EPLSRGRACFRSALKRCAGACCG 195 FG + + + ++ I + + E R C + C C Sbjct: 122 KDGSKYFGPYVDGSSVKDIIELIKKTFPIRTCKKNIVEGAKAIRPCLNYQIGLCKAPCAQ 181 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 E+ + ++ L L M + + + Sbjct: 182 YIKKSEYREIIDDVIKLLSGKHLDIVENFKL-----NMEKAAENLEFEKAAMLRDKINII 236 Query: 256 TLIRTPAGF 264 I Sbjct: 237 EKIGEKQKI 245 >UniRef50_A1AWP2 Excinuclease ABC subunit C n=1 Tax=Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) RepID=A1AWP2_RUTMC Length = 594 Score = 249 bits (636), Expect = 8e-65, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 98/266 (36%), Gaps = 15/266 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAAMLRQS 77 ++ L +L T PGVY + D + +Y+GK+ N+++RV S+ ++ Sbjct: 1 MLIQEKLKNLTTNPGVYQMFDKQDQV-IYVGKAKNLKNRVSSYFVKTHEQNKARVLVANI 59 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 + I TA E ALLLE+ LIK+ P +N L+ ++ + ++ + V Sbjct: 60 KDFKVIVTATETQALLLESELIKQHMPRYNILLKDSKSYPYIFISHDKHPRVGFYRGKKC 119 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 ++ FG + + +L + K+ SR R C + C+ C K Sbjct: 120 QSAQYFGPYPSAHVVRDSLSLLKKIFKVRQCT-NSTYRSRSRPCLEYQIGLCSAPCVNKI 178 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 S E + + L G L+ +M + + Sbjct: 179 SDENYQSDVLMMSLFLSGK-----GRETLERVSKKMQLASKNLEFELAARLRDQLIDLRT 233 Query: 258 IRTP----AGFDHDGYKILCKPLLSG 279 I+ + D D I + ++G Sbjct: 234 IQEQHTSSSSNDLDVVSIAQQDGVNG 259 >UniRef50_A0QWV6 UvrABC system protein C n=27 Tax=Actinomycetales RepID=UVRC_MYCS2 Length = 706 Score = 249 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 52/284 (18%), Positives = 95/284 (33%), Gaps = 23/284 (8%) Query: 19 EYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAM 73 P R +P PGVY F + +Y+GK+ ++RSR+ S+ P M Sbjct: 2 PDPATYRPAPGSIPVEPGVYRFRDPHGRV-IYVGKAKSLRSRLTSYFADITSLAPRTRQM 60 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAK 132 + + + W E+ AL LE IKE P FN R R ++ L + + + Sbjct: 61 VMTAGSVEWTVVTTEVEALQLEYNWIKEFDPRFNVRYRDDKSYPVLAVTLNEEYPRLMVY 120 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR--GRACFRSALKRCA 190 + FG +++ A + L + G+ + R C + +C+ Sbjct: 121 RGPRRKGVRYFGPYSHAWAIRETLDLLTRVFPARTCSAGVFKRHKQIDRPCLLGYIDKCS 180 Query: 191 GACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS 250 C G+ S E+H + + L K+ +MT ++ + Sbjct: 181 APCVGRVSAEQHRQIVLDFCDFLGGKTDRLA-----KDMEQQMTAAAEQLDFERAARLRD 235 Query: 251 LEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRA 294 A K + ++ + + A Sbjct: 236 DISALK---------RALEKQAVVFGDGTDADVVAFADDDLEAA 270 >UniRef50_Q0RH00 DNA excision repair enzyme UvrABC; UvrC subunit n=1 Tax=Frankia alni ACN14a RepID=Q0RH00_FRAAA Length = 802 Score = 249 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 96/282 (34%), Gaps = 23/282 (8%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLR 75 P R +P PGVY F E + LY+GK+ N+R+R+ ++ P M++ Sbjct: 4 PASYRPAPGSIPETPGVYRFRDEHGRV-LYVGKAKNLRARLANYFADLHTLHPRTQHMVQ 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + + W + E+ AL LE IKE P FN R R ++ +L + + + Sbjct: 63 AASAVDWTVVSTEVEALQLEYTWIKEFDPRFNVRYRDDKSYPSLAVTLHEEFPRLQVMRG 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGL--LGLEPLSRGRACFRSALKRCAGA 192 + FG +A+ A + L + + GR C + RC+ Sbjct: 123 PKRKGVRYFGPYAHAWAIRETLDLLLRVFPARTCSAGVFKRAGQVGRPCLLGYIDRCSAP 182 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C G+ E H + + + + L+ EM Q Q + + Sbjct: 183 CVGRVDAETHREIVDDFCDFMSGQTGRY-----LRRLEQEMQQAASAQEYERAARLRDDA 237 Query: 253 EATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRA 294 A K + ++ + A Sbjct: 238 GALR---------RAIEKQAVVLPDGTDADVVAFAEDELEAA 270 >UniRef50_Q12W02 UvrABC system protein C n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=UVRC_METBU Length = 604 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 106/245 (43%), Gaps = 13/245 (5%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSR 78 +R ++++P PGVYL SD + +YIGK+ +++ RV + + AM+R+ Sbjct: 1 MRPDISNIPELPGVYLMKDISDNI-IYIGKAKSLKKRVSQYFQSSKNHSSKTRAMVRKIA 59 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS 137 + +I T E+ AL+LEA L+K+ +P +N L+ +++ +++ + ++ Sbjct: 60 DVDYIVTESEVAALILEANLVKKNRPHYNIDLKDDKRYPYVKVTVNTKFPKIFITRRRLM 119 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG + N + Q L I+ ++ RAC + RC C G Sbjct: 120 DGALYFGPYTNVKPVRQTLDMISQIFRIKRCNR-RVDGKGKRACLNYHIDRCYAPCNGSI 178 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + EE+ + ++++ + +KE +M + I Q + + +A Sbjct: 179 TPEEYRNNVMEAVKLFKGETSG-----TIKELQEKMNIHAIAQEYESAAVIRDQIDALKS 233 Query: 258 IRTPA 262 + Sbjct: 234 LSRQQ 238 >UniRef50_C5BV40 UvrABC system protein C n=16 Tax=Actinomycetales RepID=UVRC_BEUC1 Length = 693 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 94/271 (34%), Gaps = 20/271 (7%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLR 75 P R ++P PGVY F + Y+GK+ ++RSR+ S+ + P M+ Sbjct: 4 PTTYRPRPGEIPDAPGVYRFRDPHGRVV-YVGKAKSLRSRLSSYFQDLSALHPRTQQMVT 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + + W E+ AL LE IKE P FN + R ++ L + + V V Sbjct: 63 TASSVEWTVVGTEVEALQLEYSWIKEFDPRFNVKYRDDKSYPYLAVTMGEEVPRVQVMRG 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLG--LEPLSRGRACFRSALKRCAGA 192 + FG + + A + + + + G + GR C + +C+ Sbjct: 123 AKRKGTRYFGPYGHAWAIRETVDLLLRVFPVRTCSSGVYKRAAASGRPCLLGYIDKCSAP 182 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C G+ S E+H + + L+ EM ++ V Sbjct: 183 CVGRISVEDHRDLAEDFCSFMAGESGVF-----LRRLESEMAAASAELDFERAARVRDDI 237 Query: 253 EATTLIRTPAGF------DHDGYKILCKPLL 277 A + D D + + L Sbjct: 238 NALRRVVEKNAVVLADGTDADVFALAADELE 268 >UniRef50_C9RQJ8 Excinuclease ABC, C subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQJ8_FIBSS Length = 623 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 58/265 (21%), Positives = 96/265 (36%), Gaps = 13/265 (4%) Query: 19 EYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA------ 72 EH+ L +LP PGVY+ + +YIGK+ +++RV S+ D A Sbjct: 3 PVSEHIERRLAELPLLPGVYIMKNAQGKI-IYIGKAKVLKNRVSSYFDGSDHAGHRAATL 61 Query: 73 MLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYA 131 ML R I WI T E AL+LEA LI++ P +N L+ ++ L + + ++ Sbjct: 62 MLPYIRDIEWIITESETEALILEANLIRKHTPKYNVLLKDDKHFPYLAFSVNEPFPRLFL 121 Query: 132 KEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAG 191 +G + + R Q A ++ L L R C + RC Sbjct: 122 SRSVKKDGCLYYGPYMSSRMIRQLQDIAARLFQIRECKLKLPLNRPVRPCLNYHIGRCGA 181 Query: 192 ACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSL 251 C G + EE+ ++ Q+ L + EM + ++ Sbjct: 182 PCAGLVTREEYQKKVAQTQMLLGGKRDDL-----IDLWEREMLEASERMDFETAAKKRDA 236 Query: 252 EEATTLIRTPAGFDHDGYKILCKPL 276 +A D + L Sbjct: 237 IQALKATSAHQKTDVSDASLCVDVL 261 >UniRef50_B6IZT9 UvrABC system protein C n=6 Tax=Coxiella burnetii RepID=UVRC_COXB2 Length = 609 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 96/270 (35%), Gaps = 21/270 (7%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSRRISW 82 +FL LPT GVY + +Y+GK+ N++ RV S+ R AM+ Q + I Sbjct: 8 AFLKTLPTGSGVYQMQDAQGKV-IYVGKARNLQKRVSSYFRRQLDSKTQAMMAQVQSIQT 66 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSRAPN 141 T E ALLLEA IK+ +P +N LR ++ L L ++ + Sbjct: 67 TITRNENEALLLEASFIKQFRPRYNVLLRDDKSYPYLYLATHQKFPRLDFYRGAKKAPGR 126 Query: 142 LFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEE 201 FG + N + + L I KL +R R C + +KRC C G + +E Sbjct: 127 YFGPYPNAGSVRENLALIQKLFKLRQCSESF-FKNRTRPCLQYQIKRCTAPCVGYVNEQE 185 Query: 202 HALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTP 261 + ++ ++ + + M + ++ Sbjct: 186 YRRQVEDAILFFEGKNDQV-----IIKLTERMEVASENLVFEEAAHYRDQIRQLRRLQKQ 240 Query: 262 AGFDHDGYKILCKPLLSGNYEITELDPAND 291 GN +I + +N Sbjct: 241 QII----------TGGKGNIDIIGIAESNG 260 >UniRef50_B2A711 Excinuclease ABC, C subunit n=2 Tax=Firmicutes RepID=B2A711_NATTJ Length = 685 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 55/270 (20%), Positives = 100/270 (37%), Gaps = 19/270 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAAMLRQS 77 E L+ L +LP +PGVYL + + +Y+GK++N+++RV S+ + M + Sbjct: 4 EDLQEKLANLPEKPGVYLMKSKQGRV-IYVGKAINLKNRVRSYFNSGNKAVKVQVMTPKI 62 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 I I T E+ AL+LE LIK+ +P +N LR ++ L++ + Sbjct: 63 SDIETIVTDSELEALILENNLIKKYRPKYNVSLRDDKNYPYLKITTEEDYPRLIIARRMG 122 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 + FG + N A + ++ + + R C + RC C K Sbjct: 123 KHGRYFGPYPNAGAVRETIKLLRKLFPVRTCKGETPKNQGKRPCLNYFINRCLAPCNEKV 182 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 S +E+ ++ + + L E +M + + + A Sbjct: 183 SRDEYREMIQDIIS-----VLEGKEEELLNELERKMNLAAEEMEFEKAAEYRNQKAALEK 237 Query: 258 IRTPAGFDHDGYKILCKPLLSGNYEITELD 287 IR +Y+I L Sbjct: 238 IRQKQKI---------VSERREDYDIIALG 258 >UniRef50_B0SB16 UvrABC system protein C n=6 Tax=Leptospira RepID=UVRC_LEPBA Length = 614 Score = 248 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 108/275 (39%), Gaps = 20/275 (7%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSR 78 ++ + +L + PG YL+ E + +Y+GK++ ++SRV S+L A+ + Sbjct: 9 TIQEKIKNLGSLPGCYLWKNELGQV-IYVGKALKLQSRVRSYLNPNQKDRKTRALFVELY 67 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFS 137 + WI T E ALLLEA LIK+ P FN RL+ +++ L + + +V+ Sbjct: 68 DLDWIATGTEKEALLLEATLIKKYNPKFNVRLKDDKKYPFLCVSTSEDYPMVFLTRKVKD 127 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG F + +AA L+ I + L L R C + RC G C G Sbjct: 128 NGDRYFGPFTDVKAARDTLELIHRIFPIRKTKLKLPLPKPQRPCLNFHMGRCLGPCQGNV 187 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + + ++ + + L L + + M + G + E Sbjct: 188 TKDTYSELVDEILRFLEGKKERL-----VADLKKAMMDASSKMEYERAGFLKQRIEKINQ 242 Query: 258 IRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 +R K + G+ +I + D+ Sbjct: 243 LRE---------KQTVVSMDGGDEDILGISKREDE 268 >UniRef50_Q0B0A0 UvrABC system protein C n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=UVRC_SYNWW Length = 601 Score = 248 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 16/272 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQ 76 E L+ L +P +PGVYLF + + LY+GK+ +R R+ S+ + P AM+ Sbjct: 4 EMLKERLKKVPLQPGVYLFKNQEGQV-LYVGKARVLRQRMRSYFQAPERMHPKVKAMMAW 62 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD 135 +I T E+ AL+LE LIK +P +N LR ++ +++ + VY Sbjct: 63 VSDFDFIVTHSEMEALILENNLIKSYKPRYNIDLRDDKSYPYIKVTVADKFPRVYLAREK 122 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 FG + + + L+ + L SR R C + +C C G Sbjct: 123 KDGVSRYFGPYTDVTSLRDTLKLLNGVFGLRSCR---TMKSRRRPCLNRDMGKCLSPCSG 179 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 + S EE++ +++ + L ++E+ EM + + ++ Sbjct: 180 EISEEEYSQKVQALITFLEGDFQE-----IVREKEKEMAMAARSLEFEKAARLRDQIQSL 234 Query: 256 TLIRTPAGFDHDG-YKILCKPLLSGNYEITEL 286 + + Y++ +LSG E L Sbjct: 235 RQLGEKQKIELASPYELDLVGMLSGEKENLVL 266 >UniRef50_C7HUD8 UvrABC system, C protein n=2 Tax=Anaerococcus RepID=C7HUD8_9FIRM Length = 615 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 93/249 (37%), Gaps = 12/249 (4%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQ 76 ++ L +LP PGVY+ D + +Y+GK++N++ RV + +M+ Sbjct: 3 NQIKEKLKELPDLPGVYIMRNSQDEI-IYVGKAINLKKRVSQYFDNNKNKGRKVLSMVSH 61 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 +I E+ AL+LE+ LIK+ +P +N LR ++Q +++ ++ + Sbjct: 62 INHFEYIIVENEVEALVLESNLIKKNRPKYNIVLRDDKQYPYIKITNEKFPRIQKVRNVK 121 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR-GRACFRSALKRCAGACCG 195 +G + + A ++ + L + + R C + RC C G Sbjct: 122 KDKGYYYGPYPDAYAVNDVIELFHILYPIRTCNLNFDKGQQLDRPCLNYYIDRCKAPCVG 181 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 K +E+ + + L V +M + I ++ A Sbjct: 182 KGDEKEYMENITKIKNFLENKSDYIPNLVI-----NKMNKASEILDFENAAKYRDYHRAL 236 Query: 256 TLIRTPAGF 264 + I Sbjct: 237 STISQKQKV 245 >UniRef50_Q2S280 UvrABC system protein C n=1 Tax=Salinibacter ruber DSM 13855 RepID=UVRC_SALRD Length = 633 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 105/275 (38%), Gaps = 21/275 (7%) Query: 14 AAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTP 68 + + + PE L L+ LPT PGVY F + +++ LY+GK+ N+R+RV ++ R Sbjct: 2 SEVLDDKPEVLVQKLDALPTDPGVYKFLDDEESV-LYVGKAKNLRNRVRTYFQQSRQRDG 60 Query: 69 DEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDV 128 M++++ + I T E AL+LE IKE QP +N LR ++ + + +R Sbjct: 61 RIEVMVQKAVDVDIIVTDTEAEALILENNQIKELQPRYNVNLRDDKTYPYICIKNERFPR 120 Query: 129 VYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS----RGRACFRS 184 V+ FG +A+ + I +L L L + C + Sbjct: 121 VFKTRTVKQDGSEYFGPYADVSKMNSMMDAIRSVFQLRTCSLDLTEEKIEAGKYDVCLQH 180 Query: 185 ALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLW 244 + C C GK+S ++ + Q + L EM + N+ Sbjct: 181 HIDNCKAPCVGKQSEADYMETIEQVKKLLNGQTQELMDL-----LKDEMQRQSDAHNFEE 235 Query: 245 LGAVNSLEEATTLIRTPAGF------DHDGYKILC 273 + +A D D + + Sbjct: 236 AARLRDQVKALKDYSQQQKVVSQDFADRDVFALHV 270 >UniRef50_B6INU7 Excinuclease ABC, C subunit, putative n=18 Tax=cellular organisms RepID=B6INU7_RHOCS Length = 694 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 103/260 (39%), Gaps = 12/260 (4%) Query: 14 AAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPD 69 A + E ++ +L LP RPGVY + LY+GK+ N++ RV ++ + Sbjct: 79 VADLARGVETIKGYLRTLPDRPGVYRMLSAEGDV-LYVGKARNLKRRVTNYTQVAKLPVR 137 Query: 70 EAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDV 128 M+ ++ + ++ T E+ ALLLE+ LIK P +N LR ++ + + + Sbjct: 138 LQRMVAETVTMEFVTTHTEVEALLLESNLIKRLMPRYNVLLRDDKSFPHILITGDHPFPQ 197 Query: 129 VYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKR 188 + RA + +G FA+ A + + + ++ SR R C + +KR Sbjct: 198 LTKHRGARDRAGSYYGPFASAGAVNRVMTALQRAFQIRTCT-DTVFASRTRPCLQFQIKR 256 Query: 189 CAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAV 248 C C G+ +A ++ ++ L Q M + + Sbjct: 257 CTAPCVGRVGDAGYAAQVAEAKSFLSGRSSEVQAR-----LARAMQDAAEALEFETAAKL 311 Query: 249 NSLEEATTLIRTPAGFDHDG 268 A T I+ + +G Sbjct: 312 RDRIRALTAIQAHQDINVEG 331 >UniRef50_Q4FPI1 UvrABC system protein C n=3 Tax=Candidatus Pelagibacter RepID=UVRC_PELUB Length = 611 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 110/277 (39%), Gaps = 15/277 (5%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQSRR 79 +R L +P PGVY D + LY+GK+ N+ +R+ S++ A ML Q+ + Sbjct: 11 IRKELPLIPKSPGVYRMLDHKD-VILYVGKAKNLPNRLKSYVAEKNHIIRTARMLSQTFK 69 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEVDFSR 138 + TA E ALLLEA LIK+ +P FN L+ ++ + ++ + V + Sbjct: 70 LEITTTANESEALLLEANLIKKHKPKFNILLKDDKSFPFVFISNKDQWAQVTKHRGKKDK 129 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG FA+ A ++ + ++ +R R C +KRC+G C Sbjct: 130 EGFYFGPFASAGTANWTIKMLQKIFQIRVCD-DSTFKNRKRPCILYQIKRCSGPCVDYID 188 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 E++ + Q+++ + K +M + ++ ++ +I Sbjct: 189 KEDYKKSVDQAIQFVSGK-----SRDIQKNLSKQMEEASEKLDFERASIFRDRIKSLNII 243 Query: 259 RTPAGF---DHDGYKILCKPLLSGNYEITELDPANDQ 292 ++ + ++ SG I + Q Sbjct: 244 QSSQRINEANLIDADVIAAYKESGKTCIQVFFYRSKQ 280 >UniRef50_D1NSJ5 Excinuclease ABC subunit C n=3 Tax=Actinobacteridae RepID=D1NSJ5_9BIFI Length = 841 Score = 247 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 107/294 (36%), Gaps = 19/294 (6%) Query: 6 TSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL 65 + A + + + R + +P PGVY + + +Y+GK+ N+R+R+ ++ Sbjct: 29 GNGVNANGAPLLGDSRDLFRPKTSQIPAEPGVYKWRDGQGRV-IYVGKAKNLRNRLSNYF 87 Query: 66 RT-----PDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ 120 + P M+ +R + W E+ AL LE IKE P FN R ++ L Sbjct: 88 QPLHQLHPRTQTMVLTARSLEWTVVGTELEALTLEYTWIKEFDPRFNVVFRDDKTYPYLA 147 Query: 121 LN-EKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGL--LGLEPLSR 177 ++ +R+ + R FG +A ++L T+ + + + Sbjct: 148 VSVGERIARTWVTRSRKRRDTRYFGPYAKVWDLRKSLDTLLRTFPVRTCTPAVFKKAQLT 207 Query: 178 GRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYH 237 R C +++ +C+ C G+ S ++H + Q + L G + + +M Q Sbjct: 208 NRPCLLASIGKCSAPCVGRISAQDHRQLVSQLVGVLTGRI----GQSYIADLTRQMKQAS 263 Query: 238 IIQNWLWLGAVNSLEEATTLIRTP------AGFDHDGYKILCKPLLSGNYEITE 285 + + + D D + I L + + Sbjct: 264 QDLEFEKAARLRDQIGMLRNVAQQNAVVLDQDVDADVFGIASDELEASVHAFFV 317 >UniRef50_Q47Z18 UvrABC system protein C n=274 Tax=Gammaproteobacteria RepID=UVRC_COLP3 Length = 639 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 94/263 (35%), Gaps = 11/263 (4%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRI 80 +FL + + GVY + + +Y+GK+ ++ R+ S+ R + +++Q I Sbjct: 23 EAFLRVVTEQAGVYRMYDSK-QVVIYVGKAKQLKKRLASYFRKDVGSVKTQVLVKQIAAI 81 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 T E AL+LE IK+ QP +N LR ++ L + + + Sbjct: 82 EVTVTHTEGEALILENNYIKKYQPKYNILLRDDKSYPYLLITAHKHPKLGLHRGGKKVKG 141 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG F A ++L+ + + +R R C + L RC+ C K S + Sbjct: 142 EYFGPFPTVGAVWESLRLMQKIFPIRQCE-DSYYRARSRPCLQHQLGRCSAPCVDKISVD 200 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 ++ ++ + L+ +++ M ++ ++ Sbjct: 201 DYKEQVNLAKLFLQGKSSAV-----IEQLVARMELASNELHFELAAKYRDQIVTLRKVQQ 255 Query: 261 PAGFDHDGYKILCKPLLSGNYEI 283 ++ L ++ Sbjct: 256 QQHVSGHVAELDVVGLYRDKTQV 278 >UniRef50_A0Q5Q7 UvrABC system protein C n=18 Tax=Francisella RepID=UVRC_FRATN Length = 612 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 103/281 (36%), Gaps = 15/281 (5%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQSR 78 L+SFL +L T GVY + + +Y+GK+ N+++RV S+ + M+ Q Sbjct: 10 DLKSFLANLTTHSGVYRMLDKHGEI-IYVGKAKNLKNRVNSYFSKGAKDSKTLMMVEQIA 68 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS- 137 RI T + A LLE LIK+ +P +N + ++ L ++ + V + Sbjct: 69 RIEITITPSDYEAYLLENNLIKQHRPKYNILFKDDKSYPYLVISRDKFPRVSFYRGKSAY 128 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 + FG + + + L TI + SR R C + +KRC C G Sbjct: 129 KKGQCFGPYVSISSVKNTLNTIQKIFPIRQCE-NSYYKSRVRPCLQYQIKRCLAPCVGLV 187 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 S +++ +L + L L+E +M Q + Sbjct: 188 SQQQYDEQLAILKKFLAGKFSTV-----LEEISAKMYQASEDMEYEKAQVYRDQLVVLRK 242 Query: 258 IRTPAGFDH---DGYKILCKPLLSGNYEITELDPANDQRAS 295 ++ D + ++ + I L N + Sbjct: 243 LQQQQIVDIQEDKTFDVIGIYMQDSYASIALLQIQNGDVVA 283 >UniRef50_C1PCU9 Excinuclease ABC C subunit domain protein n=1 Tax=Bacillus coagulans 36D1 RepID=C1PCU9_BACCO Length = 361 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 55/275 (20%), Positives = 100/275 (36%), Gaps = 17/275 (6%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAAMLRQSRRI 80 + L+ LP PG YL + +Y+GK+ +++RV S+ ++ + + Sbjct: 5 ILHKLSLLPEEPGCYLMKSREGEI-IYVGKAKKLKNRVRSYFTGSHDEKTTQLVGEIFDL 63 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 WI TA AL+LE LIK+ +P +N L+ ++ +++ ++R + Sbjct: 64 EWIVTATNTEALVLEMNLIKQYRPKYNIMLKDDKSYPFIKITDERHPQLILTREAGRDKG 123 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG F N RAA + + + L P S R C L C G C + E Sbjct: 124 KYFGPFPNARAAAETKKVLDRLYPLRRC-----PESSTRPCLYYQLGLCIGTCAREVGEE 178 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 E+ ++R+ + LK+ EM Q ++ + + Sbjct: 179 EYKEQIRKIVHFFHGGY-----RAVLKDMKKEMLQAAKKLDFEKAEQLKEQIMQIEVTME 233 Query: 261 PAGF---DHDGYKILCKPLLSGNYEITELDPANDQ 292 D I + G + + + Sbjct: 234 DQNIVLNDPVSRDIFGFAVQDGFMCVHVFYMRDGR 268 >UniRef50_B2I637 UvrABC system protein C n=15 Tax=Xanthomonadaceae RepID=UVRC_XYLF2 Length = 621 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 98/274 (35%), Gaps = 13/274 (4%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRI 80 + F L T PGVY + DT+ LY+GK+ +R RV S+ AML Q R+ Sbjct: 12 KRFAAHLSTAPGVYRMYAADDTL-LYVGKAGALRKRVASYFNGTPKNTRLTAMLAQVVRM 70 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 T E ALLLE +LIK P +N LR ++ + L + + Sbjct: 71 DVTITRNEAEALLLENQLIKSLTPRYNVLLRDDKSYPYVLLTREAWPRIALHRGPQIVPG 130 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG + A L I KL +R R C + + RC+ C +H+ Sbjct: 131 RYFGPYPGVTAVRDMLNLIHKLFKLRSCE-DSVFRNRSRPCLQYQIGRCSAPCVNVVTHD 189 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 + + + L + +E M + + L + ++ Sbjct: 190 NYTEAVHRVTLFLEGKSD-----LLAEELIQAMQVASEHLEFEQAARLRDLLTSLRSMQN 244 Query: 261 PAGFDHDGYKI--LCKPLLSGNYEITELDPANDQ 292 D + L LSG+ + L + + Sbjct: 245 RQYVDGRAADLDVLACAALSGHACVLLLSFRDGR 278 >UniRef50_Q2LR71 UvrABC system protein C n=1 Tax=Syntrophus aciditrophicus SB RepID=UVRC_SYNAS Length = 618 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 98/263 (37%), Gaps = 18/263 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAM----LRQS 77 + L ++ P PGVYL + + LY+GK+ N++SR ++ D AM + + Sbjct: 4 QQLEGRIDIAPRTPGVYLMKDAAGKI-LYVGKAKNLKSRTRAYFSGTDSRAMIPFLVSRI 62 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDF 136 I +I T E AL+LE LIKE P +N R ++ ++ + + Sbjct: 63 HDIEFILTETEKEALILENNLIKEHHPRYNICFRDDKAYFNIRADLNEPFPRFQLVRRPR 122 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 FG + + +A + LQ + L E SR R C +KRC C G+ Sbjct: 123 KDGAKYFGPYPSSASARETLQFLQSIFPLRTC-RDAELKSRTRPCLEYQIKRCLAPCVGR 181 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 + E++ +R + L G L+E M N+ + A Sbjct: 182 INSEDYLQMVRDGVSFLEGR-----GNNLLRELRERMKMAAEQMNYEEAAFLRDRIRAIE 236 Query: 257 LIRTPAGF------DHDGYKILC 273 D D + + Sbjct: 237 ETLERQRMVSMTFKDQDIFGLYR 259 >UniRef50_Q3ZYA3 UvrABC system protein C n=5 Tax=Dehalococcoides RepID=UVRC_DEHSC Length = 607 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 106/276 (38%), Gaps = 22/276 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQ 76 E L++ + LP PGVYL + +Y+GK+ ++ RV S+ P ++ Q Sbjct: 4 ETLQNQIASLPENPGVYLMKNAQGEI-IYVGKAAVLKDRVKSYFVPPSRLTPKTCQLVSQ 62 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD 135 + ++ T E AL+LE LIK +P FN RL+ ++ L++ ++ +Y Sbjct: 63 INELEYLITGSEQEALILELNLIKRHRPYFNVRLKDDKGFPYLKITLNEKWPRIYITRSM 122 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 FG FAN R+ LQ + + + EP R C + +C C G Sbjct: 123 ADDGGRYFGPFANTRSVRHTLQVLKELFRFRSCNR-TEPEKHSRPCLEYDIHQCLSPCTG 181 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 K S ++ + Q++ L LK M + ++ + Sbjct: 182 KISKSDYDHLISQAILFLEGKQDQV-----LKLLIRLMNEASARLDYETAALRRDQIASI 236 Query: 256 TLIRTPAGFDHDGYKILCKPLLSGNYEITELDPAND 291 + +G ++ + ++G + D Sbjct: 237 KEV-------IEGQQLAAR--VTGEQDAIAFAQEGD 263 >UniRef50_C0QWI5 Excinuclease ABC, C subunit n=2 Tax=Brachyspira RepID=C0QWI5_BRAHW Length = 613 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 99/289 (34%), Gaps = 18/289 (6%) Query: 18 YEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAM 73 E ++ L +P + GVY + +YIGK+ +++ RV S+ A+ Sbjct: 3 QEVKSYIHDKLKRIPDKSGVYFMKDSKSEI-IYIGKAKSLKKRVSSYFNNSNKDAKTTAL 61 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKE 133 + R I +I T E+ AL+LEA +I++ +P +N L+ + + + + V Sbjct: 62 VEHIRDIEYILTENEVEALILEAEMIRKHKPHYNILLKDQKSFPFIAITNEHFPRVIKAR 121 Query: 134 VDFSRAP-----NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKR 188 + +G + A ++ I D KL R C + + Sbjct: 122 NVIDKDNARKYKKYYGPYVAAERADNIVKFIIDNFKLRRCKYDFPLKRAIRPCLYHHIGK 181 Query: 189 CAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAV 248 C C E++ + ++ L + EM + + + Sbjct: 182 CTAPCADLIKEEDYDKTIDDAIMVLEGNVDEL-----VARLKQEMFVHAEKLEFEAAKDL 236 Query: 249 NSLEEATTLIRTPAGF---DHDGYKILCKPLLSGNYEITELDPANDQRA 294 + I + D I+ +GNY I L + A Sbjct: 237 RDKIDLLKYITVEQSIYIPESDDIDIIGAYGENGNYTIVILSVKGGKLA 285 >UniRef50_A5UY12 Excinuclease ABC subunit C n=5 Tax=Chloroflexaceae RepID=A5UY12_ROSS1 Length = 669 Score = 246 bits (628), Expect = 8e-64, Method: Composition-based stats. Identities = 52/295 (17%), Positives = 98/295 (33%), Gaps = 28/295 (9%) Query: 10 LEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP- 68 + P L +P PGVYL+ + +Y+GKS +R R+ S+ Sbjct: 1 MPDLTHTAIADPTAFEERLRAVPLAPGVYLWKNAQGKI-IYVGKSKRLRDRMRSYFNQTG 59 Query: 69 ----DEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-E 123 A ++ Q I T+ E+ ALLLE LIK+ +P FN L+ ++ +++ Sbjct: 60 DPYGKTARLVEQIADFQVIVTSTELEALLLEMTLIKQHRPRFNVLLKDDKSYPYIKVTLH 119 Query: 124 KRVDVVYAKEVDF-SRAPNLFGLFANRRAALQALQTIADEQKL-----CYGLLGLEPLSR 177 + ++A FG +++ A + L + C Sbjct: 120 ETWPRIFATRNPRWEEGARYFGPYSSAGAVYRTLDQLNRLFAFRPPSRCPDDKFNRHRRM 179 Query: 178 GRACFRSALKRCAGACC-GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQY 236 G+ C +KRC G C G + EE+ + L + +K +M + Sbjct: 180 GKPCLYYDIKRCLGPCVPGLVNQEEYRATIESVCRFLEGKSD-----LVVKTLRRQMEEA 234 Query: 237 HIIQNWLWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPAND 291 ++ + + + + ++ L Sbjct: 235 AERLDFERAARLRDSIR---------DIELISQRQQVLRHDDADQDVIGLAREEG 280 >UniRef50_B5YHU3 Excinuclease ABC, C subunit n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHU3_THEYD Length = 589 Score = 246 bits (627), Expect = 8e-64, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 109/275 (39%), Gaps = 22/275 (8%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAAMLRQSRRISWI 83 LN +P+ PGVYLF + LY+GK+ N+R+R+ S+ ++ P ++ M++ + S+I Sbjct: 4 LNTVPSLPGVYLFKDSKGKV-LYVGKAKNLRNRLKSYFQSDDLDPRKSKMVKLIKDFSYI 62 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAPNL 142 T+ E AL+LEA LIK+ +P FN LR ++ L++ + + Sbjct: 63 VTSNEFEALVLEANLIKQHKPSFNVLLRDDKSYPYLRITVVEEWPKIDVVRKPKKDGNLY 122 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 FG + ++ +AL I + L R C + +KRC C G S E++ Sbjct: 123 FGPYVPAQSMWEALSFIRRNFPIRTCKYRL--NKPIRPCVQYQMKRCPAPCAGFISREDY 180 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPA 262 + + + L+ + +M + + + I T Sbjct: 181 MKGVNEVVLFLKGQKTELLNI-----LYEKMQKLSHELKFEAAAKIRDQIRRLEKIFTQQ 235 Query: 263 GF------DHDGYKILCKPLLSGNYEITELDPAND 291 D D + + + + L N Sbjct: 236 RVVSQTLDDMDV---IGVYIENSKISVNTLFVRNG 267 >UniRef50_B0VLX1 UvrABC system protein C n=17 Tax=Moraxellaceae RepID=UVRC_ACIBS Length = 599 Score = 246 bits (627), Expect = 9e-64, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 108/279 (38%), Gaps = 15/279 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQS 77 H+ L +L PGVY G+ + LY+GK+ N+++RV S+ P A++ + Sbjct: 7 PHIEKILANLTQLPGVYKMLGKEGEL-LYVGKAKNLKNRVSSYFVKTIEHPKTQALVARI 65 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD- 135 I + T E ALLLE LIK+ +P +N LR ++ + ++ +K + + Sbjct: 66 YDIETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSADKPYPRIASGRGKG 125 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 + FG + + +A L + + R R C + +KRC+ C G Sbjct: 126 KHQIGKFFGPYPSAYSARDTLLVLQKLFNVRQCE-NSYFSQRKRPCLQYQIKRCSAPCVG 184 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 S E++ + S+ L+ +E +M Q + Sbjct: 185 LVSPEDYKEDVNNSIRFLQGDTKELN-----QELIAKMEQAAADLEFEKAVFYRDRLSLL 239 Query: 256 TLIR-TPAGFDHDGY-KILCKPLLSGNYEITELDPANDQ 292 ++ A F G IL +G + + N + Sbjct: 240 REVQAQQAVFKVKGEADILAITYQAGVTCVQIMHVRNGR 278 >UniRef50_B4RF25 UvrC, excinuclease ABC, C subunit n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RF25_PHEZH Length = 662 Score = 246 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 109/293 (37%), Gaps = 17/293 (5%) Query: 8 PRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSH--- 64 P LE +A ++ + LP RPGVY GE + LY+GK+ +++ RVL + Sbjct: 43 PMLETQAPLKGA--ALIKDEVRRLPDRPGVYRMIGEDGEV-LYVGKARSLKKRVLQYAQG 99 Query: 65 -LRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE 123 T A M+ +R + ++ T E ALLLE LIK+ +P FN LR ++ + + Sbjct: 100 RFHTQRIAHMVDLTRAMEFVTTRTETDALLLEINLIKQLKPRFNVLLRDDKSFPEIVIRR 159 Query: 124 KR-VDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACF 182 + S + FG FA+ A + L T+ L +R R C Sbjct: 160 DHAAPQLRKHRGAHSIKGDYFGPFASAWAVNRTLNTLQKAFLLRSC-SDSVYETRTRPCM 218 Query: 183 RSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNW 242 ++RC+ C G S E++ + ++ LR ++ EM + Sbjct: 219 LHQIRRCSAPCTGLISLEDYNALVDEAGAFLRGK-----SRAVMERMAGEMQAAAEDLEF 273 Query: 243 LWLGAVNSLEEATTLIRTPAGFDH---DGYKILCKPLLSGNYEITELDPANDQ 292 + A + + D + G + Q Sbjct: 274 ERAARLRDRIRALASVAQEQQINPETVDEADVFALHAEGGQACVQVFFFRAGQ 326 >UniRef50_C4XSA3 UvrABC system protein C n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XSA3_DESMR Length = 691 Score = 246 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 98/273 (35%), Gaps = 19/273 (6%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQSRRISWI 83 + P PGVYL G + LY+GK+ N+RSR+ S+ R AA++ + + + Sbjct: 7 KNFPMSPGVYLMKGARGKI-LYVGKAKNLRSRLSSYFRNDAGLTVKTAALVAKVEGVDVL 65 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEVDFSRAPNL 142 TA E ALLLE+ LIK+ +P +N L+ ++ +L++ + Sbjct: 66 LTASEKEALLLESSLIKKHRPRYNIVLKDDKNYILFKLDKRSPFPRLAFTRRVERDGAAY 125 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 FG F + AA + + L +R R C ++ +C C E+ Sbjct: 126 FGPFTSAAAARATWKELGRAFPLRKCG-DRAMANRVRPCLYHSIGQCLAPCVLAVDPGEY 184 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPA 262 A +R+ L A L+ EM Q + + L A Sbjct: 185 AALVRRVEAFLTGR-----SAEVLRAVEHEMEQAAESLAFEKAAGLRDLLRAMKKTVEGQ 239 Query: 263 G------FDHDGYKILCKPLLSGNYEITELDPA 289 D D + P G + Sbjct: 240 ATVLTRLIDIDVVGLAAVPTGVGLCVLFVRQGR 272 >UniRef50_Q6MKS2 UvrABC system protein C n=1 Tax=Bdellovibrio bacteriovorus RepID=UVRC_BDEBA Length = 630 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 101/253 (39%), Gaps = 13/253 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQ 76 E +R + + PT+ GVYL +D + +YIGK+ N+R+RV S+ +P ++ Sbjct: 7 EEVRDKVKEFPTQSGVYLMKNTADKI-IYIGKAKNLRNRVRSYFNDSKDHSPKTRLLVSN 65 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEVD 135 + +I T E+ A LLEA LIK+ +P +N RLR ++ ++ + + +Y Sbjct: 66 ICEVEYILTKTEVEAFLLEASLIKKHRPKYNIRLRDDKAYPYIRFSWGDQAPRLYLARKV 125 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 FG + + A ++ + K+ SR R C + RC C Sbjct: 126 KKDGSLYFGPYTSGLAVHGTIKFLNRTFKIRDCT-DAVFKSRTRPCMTYQIGRCTAPCVK 184 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 + E++ + + L+ +K +M + + + EA Sbjct: 185 YITMEDYRNEVEGAKLFLKGQ-----NKKVIKSMTEKMMGAADEEKFEVAARLRDSIEAI 239 Query: 256 TLIRTPAGFDHDG 268 I +D Sbjct: 240 KAILQKQAVINDT 252 >UniRef50_A8GP33 UvrABC system protein C n=14 Tax=Rickettsia RepID=UVRC_RICAH Length = 651 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 109/269 (40%), Gaps = 13/269 (4%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT---PDEAAMLRQS 77 E ++S L D P R GVY + + +Y+GK+ N++ R+ ++++ M+ + Sbjct: 8 SELIKSKLIDAPERCGVYRMFDVNKQV-IYVGKAKNLKKRLTHYIKSDLDNKTLRMIANT 66 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDF 136 + + T E+ ALLLEA+LIK+ QP FN L+ ++ ++L + + Sbjct: 67 CFLEYSITNSEVEALLLEAQLIKKFQPKFNILLKDDKSFPFIKLRLDHDFPQLLKYRGKT 126 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 FG FA+ L + KL SR R C + +KRC C GK Sbjct: 127 LNDGKCFGPFASATEVNTTLTELQKIFKLRSCT-DNYFNSRTRPCMQYEIKRCYAPCVGK 185 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 + E++ + Q + L+ Q +M + + + +A + Sbjct: 186 INKEDYRDLVAQVKDFLQGRTKALQEN-----LSKKMEELSSQMRFEEAAEIRDRIKALS 240 Query: 257 LIRTPAGFDHDG--YKILCKPLLSGNYEI 283 ++ + I+ +G+Y + Sbjct: 241 YVQLKSCVSDIVKDADIIVVVEKNGHYCV 269 >UniRef50_A7VUD6 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VUD6_9CLOT Length = 628 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 102/247 (41%), Gaps = 12/247 (4%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSR 78 LR+ LP PGVYL S+ + +YIGK+ +++RV + P M+ Q Sbjct: 8 LRTRAMALPAAPGVYLMKNASNEI-IYIGKAKALKNRVSQYFGSPKNHPPKVRKMVSQVD 66 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 +I T E AL+LE LIK+ P +N L+ ++ +++ K ++ + + Sbjct: 67 HFDYILTDSEFEALVLECSLIKQHTPKYNILLKDDKGYHYIKVTPKPYRRIFEAKQKLND 126 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLL-GLEPLSRGRACFRSALKRCAGACCGKE 197 G + + + Q++ KL + + RGR C +K+C C GK Sbjct: 127 GAEYIGPYTSSFSVKQSVDEARKIFKLPTCSRKFPQEIGRGRPCLNYFIKQCCAPCRGKL 186 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 S EE+ + ++LE L+ V++K+ +M + + + A Sbjct: 187 SEEEYEGYVDEALEFLKG-----GSVVSVKDMTQQMNEAAENLEFERAARIRDRISAVKR 241 Query: 258 IRTPAGF 264 I Sbjct: 242 ITAKQKV 248 >UniRef50_B0S0L4 UvrABC system protein C n=2 Tax=Finegoldia magna RepID=UVRC_FINM2 Length = 608 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 98/247 (39%), Gaps = 11/247 (4%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE----AAMLRQSR 78 ++ L +P +PGVY+ H ++D + +Y+GK++++R RV + + + AAM+ Sbjct: 3 DIKKELQKVPHKPGVYIMHDKNDEI-IYVGKAIDLRRRVGQYFDSSKKLAKVAAMVSHVE 61 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 +I E AL+LE+ LIK+ P +N LR ++Q +++ ++ V Sbjct: 62 YFEYIIVNNECEALVLESNLIKKNSPKYNIVLRDDKQYPYIKITNEKFPRVLKTRRVLKD 121 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR-GRACFRSALKRCAGACCGKE 197 FG F N A + I + K+ L + + R C + RC G C Sbjct: 122 KAKYFGPFPNAYAVNDIIDLIHETYKIRTCNLNFDKGQKLKRPCLNYYINRCDGMCVYDV 181 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + E++ L + L K+ +M N+ + + Sbjct: 182 NEEDYNKELLEVENFLNGREDELT-----KKLTDKMMAASKNLNFELAAKLRDSITNIQV 236 Query: 258 IRTPAGF 264 I Sbjct: 237 ILEKQNI 243 >UniRef50_UPI00016BFB47 excinuclease ABC, C subunit n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFB47 Length = 602 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 53/273 (19%), Positives = 105/273 (38%), Gaps = 16/273 (5%) Query: 30 DLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSRRISWIC 84 +LPT PGVYL + D + +Y+GK+ N+++RV + + M+ +I Sbjct: 3 NLPTTPGVYLMKDDLDEV-IYVGKAKNLKNRVSQYFQKNKNHSAKTIKMVSNIASYEYIV 61 Query: 85 TAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAPNLF 143 T E+ AL+LE LIK+ P +N RL+ +++ +++N + + F Sbjct: 62 TNTEVEALILECNLIKKYSPKYNIRLKDDKRYPYIKINIKSPFPRIQVVRKIIKDDAKYF 121 Query: 144 GLFANRRAALQALQTIADEQKLCYGLLGLEPL-SRGRACFRSALKRCAGACCGKESHEEH 202 G + + + + ++ I +L L + R C + RC+G C + E+ Sbjct: 122 GPYTDATSMWEMIELIKQLWQLRSXNKKLPKDIGKNRECLNFHIGRCSGPCIKNITAREY 181 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPA 262 + + +E L + E M++ N+ + A + Sbjct: 182 HKIVDEIVEFLSGDY-----RKXVTELKQRMSEASDAMNFELAATLRDQLIAIAKLEQKQ 236 Query: 263 GFD---HDGYKILCKPLLSGNYEITELDPANDQ 292 D D I+ + + I + + Sbjct: 237 TVDTASKDNQDIVAYAEGTNDALIQVYFVRSGK 269 >UniRef50_A0L8U4 Excinuclease ABC subunit C n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8U4_MAGSM Length = 617 Score = 244 bits (623), Expect = 2e-63, Method: Composition-based stats. Identities = 57/276 (20%), Positives = 100/276 (36%), Gaps = 19/276 (6%) Query: 10 LEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR--- 66 + + + L+ + LP +PGVY F+ ++ + LY+GK+ +R RV S+ Sbjct: 1 MNDPCESHEARLQRLKRDVKQLPLKPGVYRFYDDAGQL-LYVGKAKALRKRVSSYFNHLA 59 Query: 67 --TPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK 124 +P M++Q R+ + TA E AL+LEA LIK QP +N L+ N+ L L Sbjct: 60 GHSPKTVVMVKQIMRLEFTTTANENDALVLEANLIKAHQPRYNVLLKDNKSYPYLHLTTD 119 Query: 125 R-VDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFR 183 + D FG + + A + L + + + R R C + Sbjct: 120 HAYPRLALYRGDRKARGRFFGPYPSAHAVRETLNWLQKIFPVRQCE-DSQFNHRSRPCLQ 178 Query: 184 SALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWL 243 + RC G CC + + + Q L + M Q +++ Sbjct: 179 YQIHRCGGPCCDRIDVTSYGAMVSQVTLFLEGK-----DKQLVNTLKEAMWQAAQARDFE 233 Query: 244 WLGAVNSLEEATTLIRTP------AGFDHDGYKILC 273 + ++ D D + Sbjct: 234 GAARLRDRIAGIEHVQERRRLNLSGEIDLDVMSVAV 269 >UniRef50_C1A8T0 UvrABC system protein C n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=UVRC_GEMAT Length = 616 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 102/272 (37%), Gaps = 21/272 (7%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSRRI 80 L LP PGVYL+ + LY+GK+ +RSRV S+ +P AM+R+ R + Sbjct: 5 QKLPHLPESPGVYLWKDVEGQV-LYVGKAKRLRSRVRSYWAQEHESSPKTRAMVRKVRDL 63 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRA 139 I E AL+LEA LIKE P FN LR ++ +++ + V Sbjct: 64 ETIVVPSEAHALILEATLIKEYHPRFNIALRDDKSYPYIRVTVNEPFPRVMVTRRLLDDG 123 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 FG + + A +AL + + L + R C ++KRC C G +S Sbjct: 124 ARYFGPYTDVGAMRRALNVVKRIFTVRSCHYALPGEAPERPCLDYSIKRCKAPCVGYQSR 183 Query: 200 EEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIR 259 E++ + + + L V M ++ + + Sbjct: 184 EDYRAMIDEVVWFLDGRTSDVMHHV-----RERMLDASERLDFERAAELRDALAHLEKME 238 Query: 260 TPAGFDHDGYKILCKPLLSGNYEITELDPAND 291 +P+ + + G+ ++ + Sbjct: 239 SPS---------VVLEVEGGDRDVVGYARDGE 261 >UniRef50_Q2RS75 UvrABC system protein C n=13 Tax=Alphaproteobacteria RepID=UVRC_RHORT Length = 639 Score = 244 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 102/276 (36%), Gaps = 21/276 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPD----EAAMLRQS 77 E +R+ L +P+ PGVY + LY+GK+ N++ RV+++ + M+ + Sbjct: 31 EAIRAALRTMPSSPGVYRMIDGKGDV-LYVGKARNLKRRVINYTQPHRLPVRIQRMIAAT 89 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKEVDF 136 + + T E ALLLE+ LIK+ +P +N LR ++ +++ + Sbjct: 90 LTMEVLTTHTEAEALLLESNLIKKLKPRYNILLRDDKSFPYIEITSDHAFPRIVKFRGTL 149 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 + FG FA+ A L + L SR R C +KRCA C + Sbjct: 150 RKGGEYFGPFASAGAVTSTLTALQKTFLLRTCA-DNVFASRSRPCLLFQIKRCAAPCVDR 208 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 + ++ + ++ L + M + ++ +A T Sbjct: 209 VAEADYKALVEEARAFLSG-----SSKALQHDLAKRMDEAAQALDYEQAAIFRDRIKALT 263 Query: 257 LIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 +++ + G ++ A Q Sbjct: 264 NVQSHQDINL---------PTLGEADVIACHQAGGQ 290 >UniRef50_D2L1M6 Excinuclease ABC, C subunit n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L1M6_9DELT Length = 695 Score = 244 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 57/273 (20%), Positives = 98/273 (35%), Gaps = 19/273 (6%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQSRRISWI 83 + PT PGVYL G + LY+GK+ N+R+R+ S+ R AA++ + + + Sbjct: 7 KNFPTSPGVYLMKGGKGKI-LYVGKAKNLRARLGSYFRGETGHTVKTAALVGRIEAVDVL 65 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEVDFSRAPNL 142 TA E ALLLE+ LIK+ +P +N L+ ++ +L++ + Sbjct: 66 LTASEKEALLLESSLIKKHRPRYNVVLKDDKNYILFKLDKRSDFPRLAFTRRVERDGATY 125 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 FG F + AA + + L +R R C + +C C +E+ Sbjct: 126 FGPFTSAAAARTTWKELGRVFPLRKCG-DRTLHNRVRPCLYYFIGQCLAPCVLPVEPQEY 184 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPA 262 +R+ L A L+ EM + + + L +A Sbjct: 185 MTLVRRVEAFLTGR-----SAEILRAVQKEMEEAAERLAFEQAAKLRDLLKAMRRTVEGQ 239 Query: 263 G------FDHDGYKILCKPLLSGNYEITELDPA 289 D D + G + Sbjct: 240 ATVLTRLVDMDVVNMAATEHGVGLCVLFVRQGR 272 >UniRef50_D1BLY6 Excinuclease ABC, C subunit n=5 Tax=Veillonellaceae RepID=D1BLY6_VEIPT Length = 608 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 24/284 (8%) Query: 20 YPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAML 74 E L ++ LPT PGVYL+ + + + +Y+GK++N+R+RV S++R P AM+ Sbjct: 2 PSEELLEKVSHLPTTPGVYLWRDQYNRI-IYVGKAINLRNRVRSYVRNDANRAPKVTAMM 60 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKE 133 +++ + I T E+ AL+LE LIKE +P +N RLR ++ ++++ ++ VY Sbjct: 61 KRAVDVEVIQTKTEMEALILENTLIKEHEPKYNIRLRDDKTYPYVKISVQEDYPRVYMTR 120 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 FG F + + L+ I L + R C + + C C Sbjct: 121 RLERDGAKYFGPFTDVTSVHVVLKLIRQYYPLRTCKS----MKVERPCLQYHMHYCEAPC 176 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 K S ++ + + +E P LKE +M + Sbjct: 177 FNKISVPDYRKYIDEIIELFEGKPIPL-----LKEIKSKMEAAAEDLRFEDAARYRDQLS 231 Query: 254 ATTLIRTPAGF-----DHDGYKILCKPLLSGNYEITELDPANDQ 292 + I+ D D + + + L + Sbjct: 232 SIEKIQEKQRMVTQRGDLDVLGLAVDTSM---ACVQLLFIRGGR 272 >UniRef50_C4FUE0 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUE0_9FIRM Length = 604 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 100/277 (36%), Gaps = 23/277 (8%) Query: 14 AAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDE 70 A + E + + L LP PG YL +D + LY+GK+ N+++RV S+ R Sbjct: 9 AQERAKVQERIEAKLKLLPDLPGCYLMKDAADQI-LYVGKAKNLKNRVRSYFRGAHDTKT 67 Query: 71 AAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVY 130 ++ + I T ALLLE LI++ +P FN RL+ L++ ++R + Sbjct: 68 TKLVSEIDHFEIIITNSNKEALLLEINLIQQYKPPFNIRLKEGTMYPYLKITKERHPQLI 127 Query: 131 AKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCA 190 FG F N AA Q Q + L RACF L +C Sbjct: 128 ITSNVTKDGGLYFGPFPNVGAATQTQQLLHRVYPLRRCGKN-----EKRACFYYHLGQCI 182 Query: 191 GACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS 250 G C + + + + ++++ + P + +M ++ Sbjct: 183 GPCDHEVTKDMYEQQIQKIKQFFNGDIQPIMT-----QLKDKMQAAAERLDFEQAADYRD 237 Query: 251 LEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELD 287 + + + + N ++ D Sbjct: 238 QLQ---------YIETTIERQIIMSQDYDNTDVFAYD 265 >UniRef50_C7RHW1 Excinuclease ABC, C subunit n=4 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RHW1_ANAPD Length = 616 Score = 243 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 100/272 (36%), Gaps = 21/272 (7%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQS 77 ++ L +LP PGVY+ D + +Y+GK+++++ RV + AM++ Sbjct: 5 QIKEKLKELPDLPGVYIMRNAEDEI-IYVGKAISLKRRVRQYFDNNKNKGAKVLAMVKNI 63 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 +I E+ AL+LE+ LIK+ +P +N LR ++Q +++ +++ + Sbjct: 64 DHFEYIIVQNEVEALVLESNLIKKNRPRYNIVLRDDKQYPYIKICKEKYPRIKKVRQVLK 123 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR-GRACFRSALKRCAGACCGK 196 FG F + A A+ L + +R R C + +C G C K Sbjct: 124 DGGRYFGPFPDAYAVNDAIDLFHLYYPFRTCNLNFDKGARLDRPCLNYFIHKCKGPCVDK 183 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 E + + + ++ L V +M N+ A + Sbjct: 184 EDEKRYLNHIDDVVKFLENKSEKIPNWVL-----AKMNDASKDLNFEMAAKYRDYYRALS 238 Query: 257 LIRTPAGFDHDGYKILCKPLLSGNYEITELDP 288 +I + + +I + Sbjct: 239 VISE---------RQNVTETGGDDLDIIAMSK 261 >UniRef50_D1BHL1 Excinuclease ABC subunit C n=16 Tax=Actinomycetales RepID=D1BHL1_SANKS Length = 703 Score = 243 bits (620), Expect = 5e-63, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 96/272 (35%), Gaps = 20/272 (7%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLR 75 P R ++PT PGVY F + + +Y+GK+ N+R+R+ S+ + P M+ Sbjct: 4 PATYRPAPGEIPTTPGVYRFRDDHGRV-IYVGKAKNLRARLSSYFQDLAALHPRTQTMVT 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + + W E+ AL LE IKE P FN + R ++ L + + V Sbjct: 63 TASSVEWTVVGTEVEALALEYSWIKEYDPRFNVKYRDDKSYPYLAVTMGESVPRAQVMRG 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLG--LEPLSRGRACFRSALKRCAGA 192 FG FA+ A + L + + G GR C + +CA Sbjct: 123 SKRVGTRYFGPFAHAWAIRETLDLLLRVFPIRTCSAGVYKRAQQSGRPCLLGYIDKCAAP 182 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C + S + H + + ++ EM+ ++ + Sbjct: 183 CVERISKDAHRALADDFCAFMAGDTAKF-----MRRLRDEMSMAAQNLDYERAARLRDDI 237 Query: 253 EATT------LIRTPAGFDHDGYKILCKPLLS 278 A + G D D + + L + Sbjct: 238 GALERAMEKNAVVLQDGTDADIFALTGDELEA 269 >UniRef50_C8X3R4 Excinuclease ABC, C subunit n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3R4_DESRD Length = 636 Score = 243 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 92/274 (33%), Gaps = 22/274 (8%) Query: 27 FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRRIS 81 + P PG YL E + +Y+GK+ +R R+ S+ + M+ + I Sbjct: 5 RAKEYPDCPGTYLMKDERGRV-IYVGKAKVLRKRLASYFQEPDRLPRKTRVMMDKVWSIE 63 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEVDFSRAP 140 +CT E A LLE LIK+ +P +N LR ++ +L++ + Sbjct: 64 TLCTETEKEAFLLENSLIKKHRPRYNIILRDDKSYVLFKLDKRHPFPRLSMTRRVVQDGS 123 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG F + AA + + + L +R R C + + RC G C + Sbjct: 124 TYFGPFTSAVAARETWKLLNRLFPLRKCK-QTTFNNRVRPCLQYNIGRCLGPCVYDIPRQ 182 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 E+ +RQ L L+ +M + + +A Sbjct: 183 EYQEVVRQVELFLTGRSKEL-----LRRLRADMQAASEDLRFEDAARLRDQIQAVEQ--- 234 Query: 261 PAGFDHDGYKILCKPLLSGNYEITELDPANDQRA 294 + + + ++ L A Sbjct: 235 ------TVEQQVAVLPGGKDRDVLGLGRTVGGVA 262 >UniRef50_B3WE47 UvrABC system protein C n=33 Tax=Bacilli RepID=UVRC_LACCB Length = 602 Score = 243 bits (619), Expect = 7e-63, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 96/265 (36%), Gaps = 17/265 (6%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAAMLRQS 77 H+ L+ LP PG Y + + +Y+GK+ N+++RV S+ AAM+ Q Sbjct: 3 SAHIEHKLSLLPDLPGSYQMKDINGKI-IYVGKAKNLKNRVRSYFKSSHDGKVAAMVSQV 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 +I T+ + A LLE LI++ QP +N +L++ +++ +R + Sbjct: 62 ADFDFIVTSTDKEAFLLEITLIQKYQPYYNIKLKKGTGYPYIKITHERDPKIEITGTIRK 121 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG + N AA + + I L +GR C + +C GAC Sbjct: 122 DGGYYFGPYPNVYAAQETMHFIQKVYPLRRCN-----GYQGRPCLYYHMGQCLGACFRTV 176 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 +E+ ++ + L + + +M + + + Sbjct: 177 PEKEYTDQIERIKRFLNGNVGKAKAS-----LTAKMERAAKNLQFERAAEIRDQLHYIEQ 231 Query: 258 IRTPAGF---DHDGYKILCKPLLSG 279 D+ + + G Sbjct: 232 TVEKQKIISHDNTTRDLFNFYMDKG 256 >UniRef50_C0GMH4 Excinuclease ABC, C subunit n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMH4_9DELT Length = 641 Score = 242 bits (618), Expect = 9e-63, Method: Composition-based stats. Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 22/263 (8%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQSRRISWI 83 +D P PGVYL E + + +Y+GK+ N+RSRV S+ R+ P ML + ++ +I Sbjct: 44 SDFPRDPGVYLMKDEQNRI-IYVGKAKNLRSRVSSYFRSSRDPSPKTRVMLGRVLQVDYI 102 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV-DVVYAKEVDFSRAPNL 142 T E ALLLEA LIK+ +P +N LR ++Q +L++ R + Sbjct: 103 TTTSEKEALLLEASLIKKHRPRYNIVLRDDKQYVLFRLDKSRPYPALELTRSARRDGSVY 162 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 FG F + AA + ++ I L + +R R C + ++RC G CC S EE+ Sbjct: 163 FGPFTSAAAARETMKVINRLFYLRKCGH-KKFRNRVRPCLQHFIRRCPGPCCLDVSTEEY 221 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPA 262 + +R+ L +K +M + ++ + EA Sbjct: 222 SREIRRLEMFLSGRSAEL-----IKGMEKDMQEASRELDFEKAALLRDQIEAVKQTTKSQ 276 Query: 263 GFDHDGYKILCKPLLSGNYEITE 285 +G+ ++ Sbjct: 277 S---------VVFPGTGDMDVFA 290 >UniRef50_C2CW30 Excinuclease ABC subunit C n=1 Tax=Gardnerella vaginalis ATCC 14019 RepID=C2CW30_GARVA Length = 749 Score = 242 bits (618), Expect = 9e-63, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 111/283 (39%), Gaps = 13/283 (4%) Query: 6 TSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL 65 S + F A+ + + + R +D+P +PGVY + E + +Y+GK+ ++R+R+ ++ Sbjct: 45 NSVKNNFGASLLGDTRDLFRPKTSDIPNQPGVYKWRDEKGKV-IYVGKAKSLRNRLSNYF 103 Query: 66 RT-----PDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ 120 + P +M+ +R + W E+ AL LE IKE P FN + ++ L Sbjct: 104 QPLNQLHPRTQSMVLTARSLEWTVVNTELEALTLEYTWIKEFNPRFNVVFKDDKTYPYLA 163 Query: 121 LN-EKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGL--LGLEPLSR 177 ++ V+ S++ FG +A +L ++ + + ++ Sbjct: 164 VSVNDDFPRVWITRNRNSKSTRYFGPYAKVWQLRHSLDSLLKTFPVRTCRQSVFVKAHKT 223 Query: 178 GRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYH 237 GR C +A+ +C+ C K + H + Q + L G + + EM + Sbjct: 224 GRPCLLAAIGKCSAPCIAKVDRKTHRHNVEQLVGVLTGSI----GDSYINDLTREMKESS 279 Query: 238 IIQNWLWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPLLSGN 280 ++ + ++ D SG+ Sbjct: 280 DNLDFENAAKIRDKINIFKIVMQQNSVVFDENVEADVFGFSGD 322 >UniRef50_Q01S04 UvrABC system protein C n=2 Tax=Acidobacteria RepID=UVRC_SOLUE Length = 623 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 98/268 (36%), Gaps = 19/268 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQ 76 LR + LP PGVYL+ + +Y+GK+ ++R+RV S+ ++ + Sbjct: 1 MELRDKVGQLPFSPGVYLYKDSGGKV-IYVGKAKSLRNRVRSYFSEDKLGDIKTGTLITE 59 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 + I +I E AL LE LIK+ +P FN LR ++ +++ ++ VY Sbjct: 60 ACDIDYILVDNEKEALALENNLIKQYKPRFNILLRDDKTYPYVKVTNEKYPRVYVTRRLR 119 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC-G 195 FG F A + + I ++ + L + C + + RC G C G Sbjct: 120 KDGAQYFGPFFPANLAHRLVHFIHRHFQVPSCKVDLTRFHP-KPCLQFHIHRCLGPCVQG 178 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 + E +A +R L + M + + + L Sbjct: 179 LTTDEAYAAAVRDVRLFLDGRHSDLA-----RGLRARMEAASLEMRFEEAAGLRDLITTV 233 Query: 256 TLIRTPAGF------DHDGYKILCKPLL 277 I D D + + +P L Sbjct: 234 EEIEERQKMAAAKGDDVDIFAVYAEPPL 261 >UniRef50_C7MCN8 Excinuclease ABC subunit C n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MCN8_BRAFD Length = 650 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 57/272 (20%), Positives = 97/272 (35%), Gaps = 20/272 (7%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLR 75 P R +PTRPGVY F E + +Y+GK+ N+R R++++ + M+ Sbjct: 4 PATYRPATGTIPTRPGVYRFRDEHGRV-IYVGKAKNLRQRLVNYFQDLSVLHERTRRMVT 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + + W E+ AL LE IKE P FN + R ++ L L ++V V+ Sbjct: 63 TAASVEWTVVGTEVEALTLEYTWIKEFDPRFNVKFRDDKSYPYLVLTMGEKVPRVHITRR 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLG--LEPLSRGRACFRSALKRCAGA 192 ++ FG + A + L + + G GR C + +CA Sbjct: 123 PRAKGDRTFGPYPQVGAIRETLDLMLRVFPIRSCTAGVYRRAERSGRPCLLGFIGKCAAP 182 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C G S EEH Q + + + + M ++ + Sbjct: 183 CVGDISEEEHRRLAEQFADFMAGNTSKYT-----RRIEQRMKAAAAAMDYETAAGLRDDL 237 Query: 253 EATTLIRTPAGF------DHDGYKILCKPLLS 278 +A + D D + L + Sbjct: 238 QALEKVMEKNSVVLSDATDADLIGLAQDELEA 269 >UniRef50_Q4JVI8 UvrABC system protein C n=8 Tax=Corynebacterium RepID=UVRC_CORJK Length = 690 Score = 242 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 106/269 (39%), Gaps = 20/269 (7%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQSR 78 R +PT PGVY F + + +Y+GK+ N+R+R+ ++ + P AM++ + Sbjct: 6 YRPEPGSIPTDPGVYTFRDAHERV-IYVGKAKNLRARLSNYFQDLDQLHPRTRAMVQSAN 64 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS 137 + W + E+ AL LE IK P FN R ++ L ++ ++++ + Sbjct: 65 HVQWTVVSSELEALNLEYTWIKRFNPRFNVMYRDDKTYPMLAISVKEQIPRAFMYRGPRR 124 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR--GRACFRSALKRCAGACCG 195 + FG + A + L+++ + G+ GR C + RC+ C G Sbjct: 125 KGVRYFGPYPKAWAIRETLESLTRVFPIRTCSAGVYRRHEALGRPCLLGYIDRCSAPCVG 184 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA- 254 K + E+H + Q L P L+ EM Q ++ ++ +A Sbjct: 185 KITPEDHRALVDQFSSFLAGNTEPV-----LRRVRKEMEQASENLDFERAASLRDQLQAM 239 Query: 255 TTLIRTPAGF-----DHDGYKILCKPLLS 278 + A D D + L + Sbjct: 240 QKSMERQAVVFSDNTDADLIAFVADELEA 268 >UniRef50_C5CDH0 Excinuclease ABC, C subunit n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CDH0_KOSOT Length = 574 Score = 242 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 56/271 (20%), Positives = 105/271 (38%), Gaps = 23/271 (8%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR------TPDEAAMLRQS 77 L + + +LP +PG+YLF + + +YIGK+ +R RV S+ R + ++ Sbjct: 5 LLAKVRELPEKPGIYLFKNKKGEI-IYIGKAKKLRKRVSSYFRASTHEQNGKTRELYQEI 63 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 + +I E ALLLEA LI + +P FN L+ +++ + +++ + + Sbjct: 64 DDLEFIVVPTEKEALLLEANLIYQHKPKFNVLLKDSKRYPYIFISDDEFPYISITRIR-D 122 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 R +G + + L + KL + +GR CF LK C+ G+ Sbjct: 123 RKGFYYGPYTSITLVRNLLDLLQRIFKLRSC-MDNRDCKKGRPCFLYHLKMCSAPLAGEI 181 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 SH E+ ++R ++ L + ++ M + + + + Sbjct: 182 SHAEYQKQVRGFMDFLDGKTLDVR-----RQLERSMQRLAENLQFEKAKEIRDVL----- 231 Query: 258 IRTPAGFDHDGYKILCKPLLSGNYEITELDP 288 FD K S + LD Sbjct: 232 ----VSFDRLYSKQAVDVSESYTADFIVLDS 258 >UniRef50_C8QX27 Excinuclease ABC, C subunit n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QX27_9DELT Length = 610 Score = 242 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 59/275 (21%), Positives = 104/275 (37%), Gaps = 22/275 (8%) Query: 27 FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRRIS 81 + D PGVYL + LY+GK+V++R R+ S+ R + ML + ++ Sbjct: 6 MIADAADAPGVYLMRDAGGQV-LYVGKAVSLRKRLQSYSRIDPAGRSKTSVMLGKVAKVD 64 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAP 140 + T E AL+LEA LIK+ +P +N LR ++ L++ ++ + Sbjct: 65 TVLTRTEKEALILEAGLIKQHRPRYNVILRDDKSYPHLKVTVQEEWPRLLMTRRVSKDGA 124 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG +A+ A + L+ + L + RAC + RC C G + E Sbjct: 125 RYFGPYASPAAMWETLRLLNSLFPLRRCKA-KKFAPGQRACLNHQMGRCPAPCIGAITPE 183 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 + R+ Q L L +E M + N+ A+ A Sbjct: 184 AYRQRVSQVLAILEGRKRELT-----RELTGRMQEAAAGLNFEEAAALRDQIRAL----- 233 Query: 261 PAGFDHDGYKILCKPLLSGNYEITELDPANDQRAS 295 + K + + ++ L + Q A+ Sbjct: 234 ----NQTLEKQVVLGRERVDLDVFGLVRRHGQVAA 264 >UniRef50_B8FHR2 UvrABC system protein C n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=UVRC_DESAA Length = 603 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 97/268 (36%), Gaps = 19/268 (7%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQS 77 + L L PGVYL ES + +Y+GK+ +++ RV S+ R ++++ Sbjct: 3 EIEKKLATLSNGPGVYLMKDESGEI-IYVGKARSLKKRVSSYFLEKPNRDLKTGILVKKI 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDF 136 I E AL+LEA LI++ +P +N L+ ++ +L+++ + Sbjct: 62 ASFDAILVTTEKEALILEANLIRKHKPRYNILLKDGKRFPSLRIDVRTSYPRLEVVRKVK 121 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 FG F++ L+ I +L EP R R C + +C G CC Sbjct: 122 KDGAIYFGPFSSAGKLRSTLKIINKTFQLRKCK-QKEPPKRNRPCLNYQMGQCLGPCCLP 180 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 +E+ + + + L+ + +M Q + + A Sbjct: 181 VDRDEYLDMVNEVILFLKGRTNDLLQKIK-----EQMAAASERQEYELAARLRDRMFAIQ 235 Query: 257 LIRTPAG------FDHDGYKILCKPLLS 278 D D I +P S Sbjct: 236 ATVEKQAAVTTDFVDRDVIGIDREPEGS 263 >UniRef50_B5YF86 UvrABC system protein C n=2 Tax=Dictyoglomus RepID=UVRC_DICT6 Length = 599 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 105/277 (37%), Gaps = 12/277 (4%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR--TPDEAAMLRQSRR 79 L+ + + P GVY+F+ S + +Y+GK+ N+R RVLS+ +P +L++++ Sbjct: 8 MDLKQKVENFPESTGVYIFYDHSGKV-IYVGKAKNLRKRVLSYFNDDSPKSNYILKKAKN 66 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSR 138 I + T E AL+LE+ LIK+ +P+ N +LR ++Q L+L + + Sbjct: 67 IEFYITDTETEALILESVLIKKYRPIMNVQLRDDKQYPMLKLTLYEEYPRLVLARRFEDD 126 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 +G + + + + L L R C + C C + Sbjct: 127 GARYYGPYTQSGTVRETISMVKKIFNLRSCNWNLPKSKPKRPCLNYFIGNCKAPCQNYIT 186 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 EE+ ++ ++ L +++ + +M +Y + + + Sbjct: 187 KEEYWEIVKGVIDFLDGKYEE-----IIEKLYDQMQEYSKNLEFEKAAKIRDKIRLLQNL 241 Query: 259 RTPA---GFDHDGYKILCKPLLSGNYEITELDPANDQ 292 F+ + ++ + + + Sbjct: 242 SEKQKIVSFNRENKDLIQFYVEDHKAKALVYLIREGK 278 >UniRef50_Q1IZB2 UvrABC system protein C n=4 Tax=Deinococcus RepID=UVRC_DEIGD Length = 616 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 54/232 (23%), Positives = 91/232 (39%), Gaps = 9/232 (3%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-TPDEAAMLRQSRRISWICTA 86 L LP PGVY+F P+YIGK+VN+RSRV H + + + +I T Sbjct: 6 LPVLPASPGVYIFR--RGGTPIYIGKAVNLRSRVAQHFKAGGKSGKFTALADSLDFITTR 63 Query: 87 GEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLF 146 E+ AL+LEA LIK+ +P +N L+ ++ L+L + ++ + +G + Sbjct: 64 NEVEALILEANLIKQHRPHYNVLLKDDKHYPFLKLTNEAFPMLVVTRRVLKDGASYYGPY 123 Query: 147 ANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRL 206 + A + I L GL + R C + RC G C + +A + Sbjct: 124 PDASAVRRVKHLIDTMFPLR-KNSGLPMQKKPRPCLNYHMGRCLGPCVDAADPQAYAQVV 182 Query: 207 RQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 L P + +M Q++ + +A + Sbjct: 183 EDVKALLEGRAAPV-----IARLKADMQAAARAQDFEQAARLRDRVQAVEKL 229 >UniRef50_UPI0001C41B0D excinuclease ABC C subunit UvrC n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41B0D Length = 615 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 108/263 (41%), Gaps = 26/263 (9%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISWIC 84 ++LP +PG+Y+ ++ + +Y+GKS ++R+RV S+ + +P ++ + +I Sbjct: 9 DELPQKPGIYIMKDINEEI-IYVGKSKSLRNRVKSYFQKNLDSPKTKVLMSHFNSLEYIV 67 Query: 85 TAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFG 144 T E AL+LEA LIK+ +P +N RL+ +++ +++ ++ + S+ +G Sbjct: 68 TNTEKEALILEANLIKKHRPRYNIRLKDDKRYPYVKITDEDFPKIVITRT-ISKTGTYYG 126 Query: 145 LFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHAL 204 F + A Q ++ + ++ C S + C C G+ S EE+ Sbjct: 127 PFTDVTAVRQTVKFLKQLFRIRTCK------RMDGPCLNSQIDLCYAPCDGQISKEEYKE 180 Query: 205 RLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPAGF 264 +++ + +K+ EM Q Q + + + Sbjct: 181 HIKKIDLFFQGKYNK-----IIKDLEIEMKQAAERQEYEKAAVIRD---------QISSI 226 Query: 265 DHDGYKILCKPLLSGNYEITELD 287 D K + + +I + Sbjct: 227 DEVMKKQFVEFENDLDQDIIAIA 249 >UniRef50_A5M6P1 Excinuclease ABC subunit C n=1 Tax=Streptococcus pneumoniae SP14-BS69 RepID=A5M6P1_STRPN Length = 553 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 97/255 (38%), Gaps = 20/255 (7%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSRRI 80 ++S L LPT PG Y+ ++ T+ +Y+GK+ N+R+RV S+ R A++ + Sbjct: 5 IKSKLELLPTSPGCYIHKDKNGTI-IYVGKAKNLRNRVRSYFRGSHDTKTEALVSEIVDF 63 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 +I T I ALLLE LIKE +P +N L+ ++ +++ +R + Sbjct: 64 EFIVTESNIEALLLEINLIKENKPKYNIMLKDDKSYPFIKITNERYPRLIITRQVKKDGG 123 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG + + AA + + + + CF + +C K+ Sbjct: 124 LYFGPYPDVGAANEIKRLLDRIFPFRKCT-----NPPSKVCFYYHIGQCMAHTICKKDEI 178 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 ++ + L+ + E +M + L +A +RT Sbjct: 179 YFKSMAQEVSDFLKGQDNK-----IIDELKGKMAAAAQTMEFERAAEYRDLIQAIGTLRT 233 Query: 261 PAGF------DHDGY 269 + D + Sbjct: 234 KQRVMAKDLQNRDVF 248 >UniRef50_C7LTD0 Excinuclease ABC, C subunit n=2 Tax=Desulfovibrionales RepID=C7LTD0_DESBD Length = 605 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 101/263 (38%), Gaps = 14/263 (5%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQSRR 79 R L PT PGVYL + + +Y+GK+ ++R R+ S+ + P M+ + Sbjct: 4 RKILPSFPTCPGVYLMKNATGRI-IYVGKAKHLRRRLASYFQPEHRLAPKVRVMMTRVET 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSR 138 I ++CT+ E ALLLEA LIK+ +P +N LR ++Q L+ + Sbjct: 63 IDFLCTSTEKEALLLEASLIKKHRPKYNIVLRDDKQYVLFCLSRNHPFPALRLTRKVLRD 122 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG F + +A + + I L +R R C + + RC G CC S Sbjct: 123 GSVYFGPFTSALSARETKRVIDRLFPLRKC-RDTVFSNRTRPCLQYHIGRCLGPCCLPVS 181 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT-TL 257 EE+ +R+ L H +M + ++ + A Sbjct: 182 EEEYRQVVRRVELFLSGKSDELMA-----GLHDQMMRLSDALDFEGAARLRDSIRALRET 236 Query: 258 IRTPAGFDHDGYKILCKPLLSGN 280 + A DG + + Sbjct: 237 VERQAAVLSDGRDLDVIGVHGHE 259 >UniRef50_Q7UPD6 Excinuclease ABC subunit C n=5 Tax=Planctomycetaceae RepID=Q7UPD6_RHOBA Length = 474 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 59/277 (21%), Positives = 106/277 (38%), Gaps = 20/277 (7%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSRRI 80 + P PGVYL + + +Y+GK+ N+RSR S+ A + I Sbjct: 47 RKVKTFPQSPGVYLMKDSAG-VVIYVGKAKNLRSRASSYFLKAASEDARTADWIGDIADI 105 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSRA 139 ++ T E+ ALL+E+RLIK+ QP NK L+ ++ L + + V S+ Sbjct: 106 DFVETESEVDALLMESRLIKDIQPRNNKELKDDKSFPYLMITTREEFPRVEVTREPPSKG 165 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGL----EPLSRGRACFRSALKRCAGACCG 195 L+G F + A A+Q + K L + E R C +++ +C C Sbjct: 166 VKLYGPFTSAGALRGAIQVMQRIFKFRTCSLDISESDERWQWFRPCLLASINQCTAPCNF 225 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 + S E++ +++ L L+E EM ++ + Sbjct: 226 RISKEDYRRDIKRLQTFLDGGKTKL-----LREMRGEMKAASKALDFERAAVLRDEINMI 280 Query: 256 TLIRTPAGFD----HDGYKILCKPLLSGNYEITELDP 288 + D + + I + L+G ++ L Sbjct: 281 ERLEERGELDTHAQPEVFYIDPQKGLAGLKKVLGLSE 317 >UniRef50_C7RAS4 Excinuclease ABC, C subunit n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAS4_KANKD Length = 612 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 96/283 (33%), Gaps = 13/283 (4%) Query: 10 LEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---- 65 + + ++ L L +PGVY G+ LY+GK+ N+ +RV S+ Sbjct: 1 MSPADDNLPSTKPQIKKILAHLSHKPGVYQMLGKDGE-TLYVGKAKNLSNRVKSYFTRQY 59 Query: 66 RTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR 125 ++P ++ I T E ALLLE LIK+ +P FN R ++ + L+ Sbjct: 60 QSPKTELLVTYIEDIHTTVTETETEALLLENNLIKKYKPRFNVLFRDDKSYPYVFLSAGD 119 Query: 126 VDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSA 185 + + FG F + A Q+L I ++ +R R C + Sbjct: 120 FPRLAYHRGAKKEKGDYFGPFPSSSAVRQSLSLIQKTFQIRQCE-DSYFANRSRPCLQYQ 178 Query: 186 LKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWL 245 +KRC C S E++A + + +K +M ++ Sbjct: 179 IKRCTAPCVDYISKEDYAKDVENVKLFYQGKSEQV-----IKRLQKKMDVASQELDFELA 233 Query: 246 GAVNSLEEATTLIRTPAGFDHDGYKILC--KPLLSGNYEITEL 286 + + + SG I + Sbjct: 234 ARYRDQIKQMRHVMQQQVISGTASDLDVIGVAYASGVCCILLV 276 >UniRef50_B3EU62 Excinuclease ABC, C subunit n=2 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3EU62_AMOA5 Length = 596 Score = 241 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 98/271 (36%), Gaps = 24/271 (8%) Query: 27 FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRRIS 81 + LP +PGVY F+ + + +Y+GK+ +++ RV S+ M+ + IS Sbjct: 10 EIGKLPNQPGVYFFYNKQQQI-IYVGKAKDLKKRVSSYFNKNQQDNLKTRRMVEEIAAIS 68 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPN 141 + E ALLLE LIK QP +N L+ ++ + + +R V ++ Sbjct: 69 FTIVNSEYEALLLENNLIKRFQPRYNILLKDDKSFPYICITRERFPKVITTRQPGAKLGQ 128 Query: 142 LFGLFANRRAALQALQTIADEQKLCYGLLGL----EPLSRGRACFRSALKRCAGACCGKE 197 +G F + + Q L I L L + + C + C G C G + Sbjct: 129 YYGPFTDLKNMYQILDLIKSLYTLRTCNYNLLEENICKHKFKVCLEYHIGHCKGPCEGLQ 188 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + E + ++Q L+ + H + A + A Sbjct: 189 TEEAYNQDIQQIEHFLKGNINAVKK--------------HFKEKMSQAAAAMDYKNAQAY 234 Query: 258 IRTPAGFDHDGYKILCKPLLSGNYEITELDP 288 A ++ K L GN ++ + Sbjct: 235 KEKIAALENYQSKSLVVNPQVGNLDVFAIVS 265 >UniRef50_A8ZVJ2 Excinuclease ABC, C subunit n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZVJ2_DESOH Length = 626 Score = 241 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 105/282 (37%), Gaps = 23/282 (8%) Query: 18 YEYPE-HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEA 71 +E PE L L P RPGVYL + + +Y+GK+ N++ R+ S+ Sbjct: 11 HELPEDRLAEKLAGAPARPGVYLMKDGAGAI-IYVGKAFNLKKRLASYFVKKERLDLKTG 69 Query: 72 AMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVY 130 ++ + I TA E AL+LEA LI+ +P +N L+ +++ +L+++ + + Sbjct: 70 LLMERVVDFDTIVTATENEALILEASLIRRHKPRYNVLLKDDKRYPSLRIDPRQPYPALE 129 Query: 131 AKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCA 190 FG F++ RA + L+ + +L G R R C + C Sbjct: 130 IVRKTRPDGAVYFGPFSSARAVRETLKVVDKTFRLRKC-RGKVFKKRSRPCINFQMGLCL 188 Query: 191 GACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS 250 G C ++A +R+ L+ + ++ M Q + + Sbjct: 189 GPCFYDVPENDYAEAVREVSLFLKGRATELVSDLRVR-----MKGAAENQEFEKAALLRD 243 Query: 251 LEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 A + K + + ++ + + Sbjct: 244 RLFAIEKV---------IEKQVVVTPDFADRDVIAVAEEGRR 276 >UniRef50_B8DGB7 UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C) n=18 Tax=Listeria RepID=B8DGB7_LISMH Length = 366 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 91/244 (37%), Gaps = 14/244 (5%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQSRRI 80 L+ L LP PG Y++ E++ + LYIGKS +++RV S+ + A ++RQ R + Sbjct: 5 LQKKLTLLPESPGCYIYRDENNEI-LYIGKSKCLKNRVKSYFHSKQIGKTARLVRQIRDL 63 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 I T E ALLLE LI++ QP FN +L+ +++ ++ + Sbjct: 64 ELIITTSEKEALLLEMILIQKYQPPFNIQLKEGTSYPYIKITNEKNPHIEVVFEVKRDGA 123 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 + FG + R +A Q + I LC GR C L C G C + Sbjct: 124 HYFGPYPGRFSARQTVDLIEKLFPLCRC-----DGKPGRPCLYYHLGLCLGPCQAEIDPA 178 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 + ++ + L + +M + + A Sbjct: 179 VYKKQIHKISRFLEGDVKNVKAK-----LQEDMLTATENLEFERAAELRDKIHAINETIE 233 Query: 261 PAGF 264 Sbjct: 234 KQHI 237 >UniRef50_Q21AW5 UvrABC system protein C n=89 Tax=Alphaproteobacteria RepID=UVRC_RHOPB Length = 699 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 109/284 (38%), Gaps = 21/284 (7%) Query: 11 EFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-- 68 E A + + + PT PGVY + + LY+GK+ N++ R+ S+ R Sbjct: 70 EVAAGPLAIGRSAIAQAVRLAPTSPGVYRMLNAASDV-LYVGKAKNVKKRLASYARPTGH 128 Query: 69 --DEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV 126 + M+ + + I TA E ALLLEA LIK+ +P FN LR ++ + + Sbjct: 129 VVRISRMIAATVSVEIISTATETEALLLEANLIKQLRPRFNVLLRDDKSFPYILITGDHW 188 Query: 127 -DVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSA 185 + SR FG FA+ + + + + + SR R C Sbjct: 189 APQIIKHRGAQSRPGRYFGPFASVGSVNRTITALQRAFLMRSCT-DAFFESRTRPCLLYQ 247 Query: 186 LKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWL 245 +KRCAG C G+ + +R++ + L + +E EM + + Sbjct: 248 IKRCAGPCTGEIDFPGYTALVREATDFLSGR-----SRLVKQELAGEMEKASAELEFETA 302 Query: 246 GAVNSLEEATTLIRTPAGFD------HDGYKILCKPLLSGNYEI 283 A + I++ G + D + I G + + Sbjct: 303 ALYRDRLAALSAIQSQQGINPRTVEEADVFAI---HQEGGYFCV 343 >UniRef50_A0AGX5 Complete genome n=3 Tax=Listeria RepID=A0AGX5_LISW6 Length = 366 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 55/244 (22%), Positives = 93/244 (38%), Gaps = 14/244 (5%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQSRRI 80 L++ L LP PG Y++ E++ + LYIGKS +++RV S+ + A ++RQ R + Sbjct: 5 LQTKLTLLPESPGCYIYKDENNEI-LYIGKSKCLKNRVKSYFHSKQIGKTARLVRQIRDL 63 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 I T E ALLLE LI++ QP FN +L+ +++ ++ + Sbjct: 64 ELIITTSEKEALLLEMILIQKYQPPFNIQLKEGTSYPYIKITNEKNPHIEVVFEAKQDGA 123 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 + FG + R +A Q + I LC GR C L C G C + Sbjct: 124 HYFGPYPGRYSARQTVDLIQKLFPLCRC-----DGKPGRPCLYYHLGLCLGPCLREIDPA 178 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 + ++ + L P + + M + + A Sbjct: 179 VYKAQIHKISRFLEGDVKPVKKKI-----QAIMQEATDKLEFERAAEQRDKLHAINETIE 233 Query: 261 PAGF 264 Sbjct: 234 KQHI 237 >UniRef50_B3DRV5 UvrABC system protein C n=18 Tax=Bifidobacterium RepID=UVRC_BIFLD Length = 746 Score = 240 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 52/277 (18%), Positives = 106/277 (38%), Gaps = 19/277 (6%) Query: 16 AIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDE 70 + + + R +D+P +PGVY + + +Y+GK+ N+R+R+ ++ + P Sbjct: 1 MLGDSRDLFRPKTSDIPAKPGVYKWRDGEGRV-IYVGKAKNLRNRLTNYFQPLYLLHPRT 59 Query: 71 AAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVV 129 M+ +R + W A E+ +L LE IKE P FN + R ++ L + +R+ V Sbjct: 60 QTMVLTARSLEWTVVATELESLTLEYTWIKEFDPRFNVQFRDDKTYPYLAVSTGERIPRV 119 Query: 130 YAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYG--LLGLEPLSRGRACFRSALK 187 + R FG +A +L + + + + GR C +++ Sbjct: 120 WVTRSRKRRDTRYFGPYAKVWELRHSLDRLLRTFPVRTCTTNVFHKAQLTGRPCLFASIG 179 Query: 188 RCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGA 247 +C+ C + +EH + E+L V G + + +M + + Sbjct: 180 KCSAPCVNRIEADEHR----RLCEQLVGVMTGRLGRPYIAQLTRDMKEASAELEFEKAAR 235 Query: 248 VNSLEEATTLIRTP------AGFDHDGYKILCKPLLS 278 + + + D D + L + Sbjct: 236 LRDQIQMLETVVQQNAVVFDQDVDADVFGFASDELEA 272 >UniRef50_O26541 UvrABC system protein C n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=UVRC_METTH Length = 579 Score = 240 bits (612), Expect = 5e-62, Method: Composition-based stats. Identities = 56/270 (20%), Positives = 101/270 (37%), Gaps = 18/270 (6%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSRRISWICT 85 LP GVY+F D + LY+GKS++IR RV S+ R P M+R I +I T Sbjct: 8 EKLPDATGVYIFRDRDDRV-LYVGKSISIRKRVSSYFREQENPRLRIMMRHLESIEYILT 66 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGL 145 E AL+LE+ LIK +P +N RL+ +++ +++ ++ V + +G Sbjct: 67 QNEKEALILESNLIKRYRPPYNVRLKDDKRYPFIKITDEEYPRVLIVRTIGRDSARYYGP 126 Query: 146 FANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALR 205 F + A + L+ I ++ C S + C C G+ S E++ Sbjct: 127 FTDTGAVRRTLKLIKSLFRIRSCR------RMDGPCLNSQIDLCYAPCDGRISREDYREI 180 Query: 206 LRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE-ATTLIRTPAGF 264 + + + ++ EM + + + E ++ Sbjct: 181 IEKVDLFFQGRYQEV-----IEVLEEEMKEASERLEFERAARIRDQIESIREVMERQHAS 235 Query: 265 DHDGYKILCKPLLSGNYE--ITELDPANDQ 292 D L G + L + + Sbjct: 236 FTDSIDQDIVALERGGDTSAVVVLQIRDGK 265 >UniRef50_D2RB48 Excinuclease ABC, C subunit n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RB48_GARVA Length = 780 Score = 239 bits (610), Expect = 8e-62, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 100/267 (37%), Gaps = 15/267 (5%) Query: 13 EAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----- 67 A + + + R D+P +PGVY + + +Y+GK+ N+R+R+ ++ + Sbjct: 54 GAPLLGDTRDLFRPASRDIPAQPGVYKWRDGEGRV-IYVGKAKNLRNRLANYFQPLYQLH 112 Query: 68 PDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRV 126 P +M+ +R + W + E AL LE IK P FN R ++ + ++ E+ Sbjct: 113 PRTQSMVLTARSLEWTVVSTEFEALTLEYTWIKAFNPRFNVVFRDDKTYPYVAVSLEETF 172 Query: 127 DVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLL--GLEPLSRGRACFRS 184 V+ +R FG +A +L ++ + + GR C + Sbjct: 173 PRVWITRNRSARHARYFGPYAKVWPLRHSLDSLLKTFPIRTCSSSVFSKAHRTGRPCLFA 232 Query: 185 ALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLW 244 ++ +C+ C G EH + + L G + + EM + + Sbjct: 233 SIGKCSAPCIGNIDPSEHRKMVEHVVGILTGSV----GESYISQIKNEMKEASEELEFER 288 Query: 245 LGAVNSLEEATTLIRTPAG--FDHDGY 269 + I FD+D Sbjct: 289 AAKLRDEIAVLNTILQQNAVVFDNDVE 315 >UniRef50_C9R9D0 Excinuclease ABC, C subunit n=1 Tax=Ammonifex degensii KC4 RepID=C9R9D0_AMMDK Length = 622 Score = 239 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 62/275 (22%), Positives = 105/275 (38%), Gaps = 20/275 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSR 78 E L LP PGVYLF E + +Y+GK+ ++R RV S+ + +P A+LR+ Sbjct: 3 EELLLKAQSLPAEPGVYLFKDERGEV-IYVGKAASLRQRVKSYFQGNPSPKVEAILRRVA 61 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS 137 + ++ T E+ AL+LEA LIK +P +N L+ ++ +++ E+ V Sbjct: 62 NLEFMVTDNEVEALILEANLIKLHRPRYNVVLKDDKSYPYIKVTVEEEYPRVLFARRRDD 121 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 + FG + A + L+ + G P R C +KRC G C G+ Sbjct: 122 KRARYFGPYTKAGAVYETLRFLRTLFPYRSC-SGPVPRPNSRPCLNYHIKRCPGPCTGQV 180 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 E + + L L++ EM Q + +A L Sbjct: 181 DPEVYRRNIDSLCLFLEGRYRQV-----LRQLEREMKQAAEELAFERAAVYRDRLQALKL 235 Query: 258 IRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 I + + ++ L D+ Sbjct: 236 ILE---------RQRVVSSRPEDLDVVGLARQEDR 261 >UniRef50_C6E9G2 UvrABC system protein C n=3 Tax=Geobacter RepID=UVRC_GEOSM Length = 649 Score = 239 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 111/274 (40%), Gaps = 23/274 (8%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPD-----EAAMLRQSRR 79 ++ + + P+ PGVYL DT+ +Y+GK+ N++ RV S+ M++ Sbjct: 4 QAMIENFPSSPGVYLMKSADDTV-IYVGKARNLKKRVRSYAGDTRDSRIHIRFMVQLVHS 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSR 138 + ++ T E AL+LE LIK+ +P +N LR ++ +L+++ +++ + S Sbjct: 63 VDYLVTDTEKEALILENTLIKQHRPKYNINLRDDKTYFSLRMDMKEQFPRLSIVRKIPSD 122 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG +A+ AA + L+ + L + L ++R R C +K+C+ CCG S Sbjct: 123 GARYFGPYASATAAKEVLKQLYKMFPLRHYPL-ATCMARKRPCLYHQIKQCSAPCCGLIS 181 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 E+A + + L + +M + L A + Sbjct: 182 AAEYAALAQGAALFLEGKNNEVA-----RLYRSKMNLASEQMRYEDAARYRDLLRAIEVT 236 Query: 259 RTPAGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 SG+ ++ + D+ Sbjct: 237 VERQK----------MVAQSGDSDVFGVHREADR 260 >UniRef50_C7H041 Excinuclease ABC subunit C n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H041_9FIRM Length = 626 Score = 239 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 101/246 (41%), Gaps = 12/246 (4%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQSR 78 + + + LP PGVYL + + +Y+GK+ N++ RV S+ ++ A M+RQ Sbjct: 3 DIEANVKKLPEVPGVYLHKDSTGKV-IYVGKANNLKKRVQSYFSKTVKSRKVAYMVRQIT 61 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS 137 +I TA E AL+LE LIK+ P +N L ++ ++++ ++ + Sbjct: 62 EFEYIVTANEKEALILECNLIKKYMPRYNVLLTDDKTYPYIKISEDEEYPRITKTRRIEK 121 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG +++ AA + + + +L L P RAC + +C G C GK Sbjct: 122 DGAKYFGPYSDEFAANEIMDLLNKIYRLKKCKLQKFPDGM-RACLNYHIGQCDGMCIGKG 180 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + E++ R+ ++ + L+ + +M + + + Sbjct: 181 NREDYLDRIEKAKDFLQGR-----DKSLIHTLRKKMQEASDGMLYESAAMYRDYITSAKS 235 Query: 258 IRTPAG 263 I Sbjct: 236 ILEKQS 241 >UniRef50_B5E2L2 UvrABC system protein C n=268 Tax=Bacilli RepID=UVRC_STRP4 Length = 615 Score = 239 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 97/255 (38%), Gaps = 20/255 (7%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSRRI 80 ++S L LPT PG Y+ ++ T+ +Y+GK+ N+R+RV S+ R A++ + Sbjct: 5 IKSKLELLPTSPGCYIHKDKNGTI-IYVGKAKNLRNRVRSYFRGSHDTKTEALVSEIVDF 63 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 +I T I ALLLE LIKE +P +N L+ ++ +++ +R + Sbjct: 64 EFIVTESNIEALLLEINLIKENKPKYNIMLKDDKSYPFIKITNERYPRLIITRQVKKDGG 123 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG + + AA + + + + CF + +C K+ Sbjct: 124 LYFGPYPDVGAANEIKRLLDRIFPFRKCTNPP-----SKVCFYYHIGQCMAHTICKKDEA 178 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 ++ + L+ + E +M + L +A +RT Sbjct: 179 YFKSMAQEVSDFLKGQDNK-----IIDELKGKMAAAAQTMEFERAAEYRDLIQAIGTLRT 233 Query: 261 PAGF------DHDGY 269 + D + Sbjct: 234 KQRVMAKDLQNRDVF 248 >UniRef50_D0WMS6 Excinuclease ABC subunit C n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WMS6_9ACTO Length = 734 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 100/272 (36%), Gaps = 20/272 (7%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLR 75 P R +PT+PGVY F + LY+GK+ N+R+R+ S+ + + AM+ Sbjct: 4 PRQYRPEQGAIPTQPGVYRFLDGEGRV-LYVGKAKNLRARLSSYFQDPAGLSDRIRAMVY 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + + W+ E+ AL LE IKE P FN R N+ L ++ + V+ Sbjct: 63 TAEAVKWVVVGSEVEALTLEYLWIKEFTPTFNVVFRDNKSYPYLAVSLGEEYPRVWVTRQ 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR--GRACFRSALKRCAGA 192 + + G + A + L + + +R GR C + +C+ Sbjct: 123 EHRKGTRYLGPYTKVWAIRETLDQLLSVFPMRSCTKSQFNQARRLGRPCLFGHIGKCSAP 182 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C + + EEH + + G+ A+ + M + + + + Sbjct: 183 CIERVTPEEHRETAMSLIRFMEG-----GGSKAIATRRKRMLEAANAEEYETAARLRDEI 237 Query: 253 EATTLIRTPAGF------DHDGYKILCKPLLS 278 A + D D + I + + Sbjct: 238 SALEAVNERNVIVLNENLDVDIFGIAFDEIEA 269 >UniRef50_B1CBT5 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBT5_9FIRM Length = 622 Score = 238 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 115/284 (40%), Gaps = 16/284 (5%) Query: 19 EYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAM 73 Y ++L + + LP GVYL E+ T+ +Y+GK+ +++RV + R P M Sbjct: 4 AYSKNLNNKIKLLPENSGVYLMKDENGTI-IYVGKAKVLKNRVTQYFRKNSNHTPKVLKM 62 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAK 132 + +I T E+ AL+LE LIK+ +P +N +R ++ +++ + ++ Sbjct: 63 VENIADFEYIITNNEMEALILECNLIKKYRPYYNILMRDDKTYPYIKITIKDEYPKLFVT 122 Query: 133 EVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLE-PLSRGRACFRSALKRCAG 191 + FG +AN A +A+ TI + + L+ + +G C + +C G Sbjct: 123 RKYINDGNKYFGPYANATYAKKAVSTINELYPIAMCKKELKSGVKKGNVCLNYHIGQCLG 182 Query: 192 ACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSL 251 C G + + +++ ++ L ++ +M Y ++ G V Sbjct: 183 VCQGNIDTKLYNRYIKEIIDILNGKTSK-----IIQSLENKMNGYSENLDFENAGKVRDK 237 Query: 252 EEATTLIRTPAGF---DHDGYKILCKPLLSGNYEITELDPANDQ 292 A +++ + D IL + + + + Sbjct: 238 IFAIRGLKSEQNVSNANADNMDILGLAMAEDMACVQVYALRDKK 281 >UniRef50_A8SNK4 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SNK4_9FIRM Length = 620 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 97/253 (38%), Gaps = 11/253 (4%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLRQSR 78 + L LP PGVY+ + + D + +Y+GKSV++++RV S+ T AM+ Sbjct: 9 DINYELKKLPDLPGVYIMYDKDDKI-IYVGKSVSLKNRVRSYFTTNHKYKKVQAMVEHIH 67 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 R +I E +L+LEA LIK+ +P +N L+ ++Q +++ ++ + Sbjct: 68 RFEYIIVNNETESLVLEANLIKKNRPKYNINLKDDKQYPYIKITNEKFPKILKVRDIKED 127 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS-RGRACFRSALKRCAGACCGKE 197 FG F + ++ + L + R C L RC+ C Sbjct: 128 KAQYFGPFPTISDLEKLMELSILIYNIRDCKLNFDKGKFLQRPCMSYYLGRCSAPCTQNI 187 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 E + +++ ++ L + + M Q + + Sbjct: 188 DRENYNNDVKRVIKFLSGDTTEIKEILL-----NRMKQSSAKEEYELAMKYRDFLSEIDY 242 Query: 258 IRTPAGFDHDGYK 270 + T F+ +K Sbjct: 243 LFTKQIFNIKKFK 255 >UniRef50_A9NEZ8 Excinuclease ABC, subunit C n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEZ8_ACHLI Length = 577 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 100/263 (38%), Gaps = 17/263 (6%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSRRI 80 ++ L+ LPT PG Y+ +S + +Y+GK+ N+++RV S+ R ++ + Sbjct: 1 MKEKLSILPTEPGCYMMLDQSGEV-IYVGKAKNLKNRVSSYFRGAHNAKTEKLISEISDF 59 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 ++I T E +L+LE LIK+ PL+N RL ++ L++ ++ ++ Sbjct: 60 NYIVTNSEQESLILEYNLIKKYAPLYNIRLIDDKSYPYLEITNEKDPMLVVSRYIEVDKT 119 Query: 141 N-LFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 LFG + N ++A + L+ + L + C + C G C + Sbjct: 120 KTLFGPYPNSKSARETLKLLQRLYPLRRCN-----PVDSKPCLYYHMGLCLGPCAHE--K 172 Query: 200 EEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIR 259 ++ + + L+ L E M Q + + A Sbjct: 173 VDYKPNIERITRFLKGDT-----KEVLNELEERMKQASEDLEFERAVEYRDMILAVKDTT 227 Query: 260 TPAGFDHDGYKILCKPLLSGNYE 282 + YK + N + Sbjct: 228 EKQIMTLNDYKDRDFISFAYNED 250 >UniRef50_C9M9X8 Excinuclease ABC, C subunit n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9X8_9BACT Length = 496 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 89/246 (36%), Gaps = 12/246 (4%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQ 76 E +R L LP RPGVYL H E + +Y+GK+ N++ RV S+ P ++ Sbjct: 2 ERIRGLLKKLPNRPGVYLMHDERGKI-IYVGKAKNLKRRVSSYFNHKDFAIPRLRKLVAT 60 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 I+ I TA + A ++E+RLIK QP FN L+ + + ++ + Sbjct: 61 VCDITTIRTASDAEAYIVESRLIKAYQPFFNVELKMGTRYPWAVVTDEPFPRLVVTRRRD 120 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 + FG F + A L I L L R C + +C C G Sbjct: 121 IK-GRYFGPFISAGALKDVLHIIEKAFPLRSCKYDLTRTKLSRPCLDYGIGKCDAPCVGL 179 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 + E+ R+ + L A + M + + G + Sbjct: 180 CTAREYGERVDDVILLLSGQT-----ADLIARLRARMEECASRLEFEAAGVARDAIRSLW 234 Query: 257 LIRTPA 262 + Sbjct: 235 RMTRSQ 240 >UniRef50_Q1AUH1 UvrABC system protein C n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=UVRC_RUBXD Length = 611 Score = 237 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 99/281 (35%), Gaps = 15/281 (5%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLR 75 PE+ + LP PGVY+F + LY+GK+ NIRSRV S+ P A + Sbjct: 2 PENSYPDRSHLPASPGVYIFRDGEGRV-LYVGKARNIRSRVASYFTRSGDGRPKIAELRE 60 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEV 134 + R+I +I GE AL+LEA LIK +P FN LR ++ + + V+A Sbjct: 61 RVRQIDFIAARGETEALVLEANLIKRHRPRFNASLRDDKSYPYIVVTTGDEYPRVFATRG 120 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 FG F + + L + + G C + R A C Sbjct: 121 PHDPRHRYFGPFPSAGSVHATLDVLNKTFRFRKCRGPEPGRRSGIPCLNYHIGRSAAPCI 180 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 G S EE+ + + L ++E+ +M + ++ + A Sbjct: 181 GAVSKEEYGAIIADVIAFLEGRVDGL-----IREREEQMRRAAAEMDFERAARLRDEAAA 235 Query: 255 TT-LIRTPAG--FDHDGYKILCKPLLSGNYEITELDPANDQ 292 + D + + + + Sbjct: 236 LRHVRDRQQATIASEDSFDAVGAYAEGEEACVQIFAVREGR 276 >UniRef50_Q6AKB8 UvrABC system protein C n=3 Tax=Deltaproteobacteria RepID=UVRC_DESPS Length = 607 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 99/280 (35%), Gaps = 22/280 (7%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLR 75 P L P +PGVYL + +Y+GK+ ++ R+ S+ R ML+ Sbjct: 2 PMFPEKILQSTPHKPGVYLMLDAKARV-IYVGKAKDLVKRLTSYTRHSSSEHNKTTVMLK 60 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + ++ I T E AL+LEA LIK+ +P +N LR ++ + + + V Sbjct: 61 KVEQVKTIITTTEKEALILEASLIKKHKPRYNIILRDDKNYPYIAVTVGEEWPRVMMVRR 120 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 FG +++ A L+ IA L G + R R C + +C C Sbjct: 121 KRRDNSRYFGPYSSATAMWATLKLIASLFPLRNC-RGEKLRPRTRPCLNRQIGKCLAPCT 179 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 G S + + + + L L+ L E +M Q N+ G A Sbjct: 180 GNVSRKIYMENVDKILLLLQGKSRDL-----LAELKRQMLQASERLNFEQAGQFRDQIRA 234 Query: 255 TTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRA 294 K L N ++ + A Sbjct: 235 LKTTLE---------KQLVAAGHGKNQDVFGYVRSGTTVA 265 >UniRef50_B7K124 Excinuclease ABC, C subunit n=5 Tax=Cyanobacteria RepID=B7K124_CYAP8 Length = 617 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 62/276 (22%), Positives = 109/276 (39%), Gaps = 20/276 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQ 76 + L + L +LP+ PGVYL + + LYIGKS +RSRV S+ R +P M++Q Sbjct: 12 DDLETRLKELPSEPGVYLMRNQGGEI-LYIGKSKKLRSRVRSYFRPSQPHSPRIGLMVQQ 70 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKEVD 135 I +I T E AL LEA LIK+ QP FN L+ +++ + + + ++ Sbjct: 71 VADIEFIVTDTEAEALALEANLIKQHQPYFNVLLKDDKKYPYVCITWSQTYPRIFITRKR 130 Query: 136 F--SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 + +G + + Q LQ + L +PL + R C + +C G C Sbjct: 131 RLNNERDRYYGPYVDTHLLRQTLQLVKRVFPLRQR---PKPLFKDRPCLNYDIGKCPGVC 187 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 G S E++ + + + L++ H +M + + + + Sbjct: 188 QGLISPEDYHKIVEKVAMIFQGRTGEL-----LEKLHQQMEKAATELRFEQAAMIRDQLK 242 Query: 254 ATTLIRTPAGF---DHDGYKILCKPLLSGNYEITEL 286 A + D + + +L Sbjct: 243 ALNALTVDQKVSLPDDTISRDAIALAKDTKHCCIQL 278 >UniRef50_C5NYN4 Excinuclease ABC subunit C n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYN4_9BACL Length = 582 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 96/244 (39%), Gaps = 15/244 (6%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAAMLRQSRR 79 L+ L LP PG YL+ + +Y+GK+ N+++RV S+ ++ + Sbjct: 4 TLQKKLELLPDNPGCYLYKDNIGEI-IYVGKAKNLKNRVKSYFTGTHNKKTQTLVSKIED 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEV-DFSR 138 + +I E ALLLE LIK+ +P FN RL+ ++ L + ++ + + Sbjct: 63 LEYIIVNSEKEALLLENNLIKKYRPYFNIRLKDDKSYPYLMITKEEHPRLLMTRKYKKNN 122 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG + + ++A + + + L R C + C G C K + Sbjct: 123 KNIYFGPYVDIKSATEVKKILDKIYPLRKCN-----PVEKRPCMYYQIGECIGPCAKKIT 177 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 +++ ++ + L L + ++ ++ + G +++ ++ + Sbjct: 178 ADDYKSQISKIKSFLTGNT-----KEILTDLQSKLQEHIKNLEFEAAGQIHNYIKSIEVS 232 Query: 259 RTPA 262 Sbjct: 233 VQNQ 236 >UniRef50_A5FM03 UvrABC system protein C n=25 Tax=Bacteroidetes RepID=UVRC_FLAJ1 Length = 597 Score = 236 bits (602), Expect = 7e-61, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 99/271 (36%), Gaps = 20/271 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP----DEAAMLRQS 77 L + LP PGVY ++ + + LY+GK+ N++ RV S+ ++++ Sbjct: 4 PSLDLQILTLPDNPGVYQYYDKDGKI-LYVGKAKNLKKRVSSYFNKIHDTAKTNVLVKKI 62 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 I I E ALLLE LIK QP +N LR ++ + + ++ ++ Sbjct: 63 VTIKHIVVPTETDALLLENNLIKTLQPRYNVLLRDDKSYPWICIKKEPFSRIFLTRRMVK 122 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLE----PLSRGRACFRSALKRCAGAC 193 FG + N + L I + L L + + C + C G C Sbjct: 123 DGSEYFGPYTNFKMVYTILDLIKELYPLRTCNYDLSQSNIDSGKFKVCLEYHIGNCKGPC 182 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 G E EE+ ++ E L+ +LK+ M Y + + E Sbjct: 183 EGLEPLEEYQRQVNAIREILKGNF-----KESLKDFKKLMNNYAQNLQFEEAQKIKEKIE 237 Query: 254 ATTLIRTPAGF------DHDGYKILCKPLLS 278 ++ + + D + I+ + Sbjct: 238 VLENYQSRSTIVNPKITNIDVFSIISDESAA 268 >UniRef50_D2R0D2 Excinuclease ABC C subunit domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R0D2_9PLAN Length = 493 Score = 236 bits (602), Expect = 7e-61, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 109/278 (39%), Gaps = 20/278 (7%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSRRI 80 + + + P PG+YL ++ + +Y+GK+ N+RSR S+ A + + I Sbjct: 66 AKVREFPRTPGIYLMKDDAGRV-IYVGKAKNLRSRAGSYFLRGAKEEYRTAIWVDEICDI 124 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSRA 139 ++ E+ ALL+EARLIK+ QP NK L+ ++ L + + V R Sbjct: 125 DYVECESEVDALLMEARLIKDIQPKHNKELKDDKTFPYLMISTREDFPRVEVTRQPADRG 184 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEP----LSRGRACFRSALKRCAGACCG 195 LFG FA+ + A+Q + K L +E R C +++++C C Sbjct: 185 VKLFGPFASAGSLRGAVQVLQRIFKFRTCSLDIEDGDDRWRWFRPCLLASIQQCTAPCNL 244 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 + S +E+ + + + L LK+ EM + + + Sbjct: 245 RISKDEYRRDIDRLITFLEGGKTRL-----LKQLTLEMQAASKALQFEVAARLRDEIKML 299 Query: 256 TLIRTPAGFD----HDGYKILCKPLLSGNYEITELDPA 289 + D + + I L+G ++ L Sbjct: 300 ETLDRRGSIDVHAQPEVFYIDPTKGLAGLKKVLGLAEQ 337 >UniRef50_Q14NX3 Putative uvrc protein excinuclease abc subunit c n=1 Tax=Spiroplasma citri RepID=Q14NX3_SPICI Length = 593 Score = 236 bits (602), Expect = 8e-61, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 99/266 (37%), Gaps = 23/266 (8%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSRRI 80 L+ + LP +PG YLF+ + LY+GK+ N+RSRV S+ ++++ R+ Sbjct: 7 LKEQVEILPAKPGCYLFYNNYHQV-LYVGKAKNLRSRVSSYFNKVYNYKTTRLVQEIVRL 65 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 I T E AL+LE LIK+ +P +N L ++ + + +++ + Sbjct: 66 ETIITKTEKEALILEHNLIKQYKPKYNILLNDDKHYPYIVITKEKDPQYLYVRNIHQKYA 125 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 +G F A + ++ + L L G+ C + +C+GAC S + Sbjct: 126 RYYGPFPEGSHAREIIKVLERLYPLRRCKGNL-----GKPCLYYHINQCSGACVKTVSPD 180 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE-------- 252 + +++ + + K M Q + + L Sbjct: 181 YYIKMIKKVHSFFKGNFTETK-----KLLEKRMLQAADNLQFEEAHKLKLLIRNLDWTLS 235 Query: 253 -EATTLIRTPAGFDHDGYKILCKPLL 277 + ++ D + L+ Sbjct: 236 SQTVEMLNQNDDLDVISLYQTAEHLV 261 >UniRef50_UPI0000E87CD9 excinuclease ABC, C subunit n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87CD9 Length = 580 Score = 236 bits (601), Expect = 8e-61, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 90/261 (34%), Gaps = 14/261 (5%) Query: 40 FHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISWICTAGEIGALLLE 95 +++ + +YIGK+ +++ RVLS+ +P M+ I + T E AL+LE Sbjct: 1 MLNKAEDI-IYIGKAKDLKKRVLSYFNKTQPSPRTRLMVGSIASIEFTVTNTEAEALILE 59 Query: 96 ARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQA 155 +I+ P +N R ++ L + + + FG F N A Q+ Sbjct: 60 NNMIRSFMPRYNVIFRDDKSYPYLAITGDKFPRIRFHRGLQKIDTKYFGPFPNSNAVRQS 119 Query: 156 LQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRV 215 +Q + L +R R C +KRC C G +E+ + Q+ L Sbjct: 120 IQLLQKVFMLRTCE-NSVFNNRSRPCLEHQIKRCTAPCVGLIEEDEYGADVNQANLFLDG 178 Query: 216 VCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPA---GFDHDGYKIL 272 G +M + N+ ++ +R F + I+ Sbjct: 179 KDSEVIGN-----LTKKMNEQSEAFNFERAAIFRDRIQSLRQVRLKQFVSDFSENDADII 233 Query: 273 CKPLLSGNYEITELDPANDQR 293 SG + + Sbjct: 234 AFAEASGKICANVVMIRGGRH 254 >UniRef50_Q1D921 UvrABC system protein C n=2 Tax=Cystobacterineae RepID=UVRC_MYXXD Length = 646 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 100/275 (36%), Gaps = 22/275 (8%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQSR 78 L L+ LPT PGVYL + +Y+GK++N+RSRV S+ + + + Sbjct: 5 LLEKLDALPTEPGVYLMKDRRGQV-IYVGKAINLRSRVRSYFNRTGDTRVFVSLLDQLLG 63 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEVDFS 137 + + + E ALLLE LIK+ +P FN L+ ++Q +L+L+ + + Sbjct: 64 DLETVLVSNEKEALLLENELIKKHRPRFNVLLKDDKQFISLRLDRTQPYPRLEVVRKYER 123 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG +++ A + L+ + +L +R R C + RC C Sbjct: 124 DGARYFGPYSSAGAIRETLRVVNRFFRLRTCT-DHVLANRKRPCLLHQIGRCPAPCVYPV 182 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 E++ + + + L ++ M + + + A Sbjct: 183 PQEDYHRSVDEVVMFLEGKAGEL-----VEGLRLRMKRAAQELKFEEAARIRDQLNA--- 234 Query: 258 IRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 + + + ++ D+ Sbjct: 235 ------IERSLERQKVATTDFKDQDVFAFHREGDR 263 >UniRef50_C0QET6 UvrABC system protein C n=2 Tax=Desulfobacteraceae RepID=UVRC_DESAH Length = 606 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 104/280 (37%), Gaps = 16/280 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQ 76 + P PGVYL + T+ +Y+GK++N++ R+ S+ +L++ Sbjct: 3 PSVLERYQSAPQNPGVYLMKDKRGTI-IYVGKALNLKKRLASYFARETGHDMKTGVLLKK 61 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVD 135 I TA E AL+LE+ LIK+ P +N L+ + L++ K + Sbjct: 62 VVDFDLIVTATEHEALILESTLIKKHSPRYNVILKDGKSYPCLRIDTSKPFPALEVVRKI 121 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 FG +++ ++ ++ + KL ++ +R R C + C GACC Sbjct: 122 GDDNAVYFGPYSSVQSVRSTIKQVNKIFKLRKC-RDVQFANRTRPCLNYQINACLGACCN 180 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 + S +E+A + + L+ + EM ++++ + A Sbjct: 181 RVSRQEYARVVGDVILFLKGRAPDLINRLKF-----EMQTEADLEHFERAAQIRDTILAI 235 Query: 256 TLIRTPAGF---DHDGYKILCKPLLSGNYEITELDPANDQ 292 D ++ + +T L + Sbjct: 236 QTTLERQVVVSTDRTDRDVIACAINGEKAVVTILFVRSGN 275 >UniRef50_UPI000050F72E excinuclease ABC subunit C n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F72E Length = 619 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 93/272 (34%), Gaps = 20/272 (7%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLR 75 P R +PT GVY F + +Y+GK+ N+R+R+ S+ P + M+ Sbjct: 4 PASYRPATGSIPTSAGVYKFRDPDRRV-IYVGKAKNLRNRLNSYFSNPAQLHPRTSTMVH 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + + W E+ AL LE I E P FN R ++ L + V + Sbjct: 63 TAASVEWTVVDTEVEALQLEWTWINEFNPRFNVMFRDDKSYPYLAITMNDEVPRAFITRG 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLG--LEPLSRGRACFRSALKRCAGA 192 + FG FA A L + + G GR C + +CA Sbjct: 123 KRRKGVKYFGPFAQVWAIKDTLDLLLRAFPMRTCTAGVYRRAERSGRPCLLGYIDKCAAP 182 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C G+ S E H R + + + + EM ++ + Sbjct: 183 CVGQISVEGHKDLARSISDFMSGNTGRFISY-----RQKEMASAAEELDYERAARLRDEI 237 Query: 253 EATTLIRTPAGF------DHDGYKILCKPLLS 278 A + + D D + ++ + L + Sbjct: 238 TALQKVLDKSAVVLSVNADCDVFALVTEELEA 269 >UniRef50_Q04EZ7 UvrABC system protein C n=42 Tax=Lactobacillales RepID=UVRC_OENOB Length = 607 Score = 234 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 90/247 (36%), Gaps = 14/247 (5%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAAMLRQS 77 E + L LP++PG Y ++ + +Y+GK+ N+++RV S+ T A ++ Sbjct: 3 SELIEQKLALLPSQPGSYQMKDKNGKI-IYVGKAKNLKNRVRSYFKAEHTGKTAELVANI 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 +I T + A LLE LIK +P FN RL+ + +++ +R + Sbjct: 62 HDFEFIVTNSDKEAFLLENTLIKRYRPYFNIRLKFSGSYPYIEITNERDPRLILANTLKH 121 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG + N AA + L + L +GR C ++ +C GAC Sbjct: 122 DHGTYFGPYPNVYAASETLHFLEMTYPLRRCN-----GYQGRPCLYYSMGQCLGACWRTV 176 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 EE+ + L A+ + +M + + + Sbjct: 177 PQEEYQKNIDAITRFLNGETGK-----AISDIKKKMKRASDSTEYELAADFRDRLKFIDQ 231 Query: 258 IRTPAGF 264 Sbjct: 232 TVESQRV 238 >UniRef50_B6AR33 Excinuclease ABC, C subunit (UvrC) n=3 Tax=Leptospirillum RepID=B6AR33_9BACT Length = 632 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 58/243 (23%), Positives = 92/243 (37%), Gaps = 13/243 (5%) Query: 18 YEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAA 72 + + L LP PGVYL E+ + LY+GKS +++ RV S+ R+ A Sbjct: 11 HSLSSLVEDRLRTLPEEPGVYLMKSETGEV-LYVGKSRSLKDRVRSYFQETRVRSARIAL 69 Query: 73 MLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYA 131 ++ + R + I T E+ AL+LE LIK +P +N LR ++ L+ + + Sbjct: 70 LVSRVRDLEIIRTKTELDALILENTLIKRYRPRYNVLLRDDKTYPYLKFSWNDPFPRLTI 129 Query: 132 KEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAG 191 + FG + N A L+ I L + L+ + R C +KRC G Sbjct: 130 TRRVRNDGNLYFGPYPNPSAMKDTLRLIRRTFPLATCTIPLDQPTLERPCVEYQIKRCLG 189 Query: 192 ACC-GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS 250 C G + E+ L+ L EM + AV Sbjct: 190 PCVAGLTTETEYRQVAMGVRLFLQGKSNDL-----LFLLENEMKARAKNLEFEKAAAVRD 244 Query: 251 LEE 253 Sbjct: 245 RYR 247 >UniRef50_D0RRP8 Excinuclease ABC subunit C n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RRP8_9RICK Length = 612 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 101/248 (40%), Gaps = 12/248 (4%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQS 77 E ++ PGVY E + + +Y+GK+ N+ +R+ ++ + M+ + Sbjct: 9 EIFKNKSKLCSNSPGVYQVFDEKNKI-IYVGKAKNLPNRLSNYSSSSTQPIRTERMIAST 67 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDF 136 RI I T E ALLLEA LIK+ +P +N L+ ++ +Q+ + + Sbjct: 68 NRIDTISTLNESEALLLEANLIKKNKPRYNVLLKDDKSFPYIQIRSSHDYPQITKFRGKH 127 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 + FG FA+ +A ++ + ++ R R C +KRC+G C G+ Sbjct: 128 NDKDIYFGPFASIASANWTIKMLQKVFQIRVCD-DNTFKGRSRPCILYQIKRCSGPCTGE 186 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 + E++ + + L K+ EM + N+ + ++ T Sbjct: 187 ITKSEYSKTVDECSSFLNGK-----SRDIQKKMSQEMEKESDRLNFEKAAILRDRIKSLT 241 Query: 257 LIRTPAGF 264 I++ Sbjct: 242 YIQSSQNI 249 >UniRef50_A1ZTX2 Excinuclease ABC, C subunit n=4 Tax=Bacteroidetes RepID=A1ZTX2_9SPHI Length = 601 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 50/268 (18%), Positives = 101/268 (37%), Gaps = 22/268 (8%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQS 77 + + L LPT GVY F ++ + LY+GK+ N+++RV S+ +++Q Sbjct: 3 QIEATLKQLPTNAGVYKFFDKN-NVLLYVGKAKNLKNRVNSYFNKSAQHNRKTINLVKQI 61 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 + + E ALLLE LIK QP +N L+ ++ + + + + Sbjct: 62 AHVDYTVVNSEFDALLLENNLIKNYQPKYNILLKDDKTYPYILITNEPFPKLVVTRKLEK 121 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEP----LSRGRACFRSALKRCAGAC 193 +G F N +A ++ I + + L L ++ + C L C C Sbjct: 122 NKGRFYGPFTNLKAMNAIVELIRELYTIRTCNLHLSKENIQQNKFKLCLEYHLGNCQAPC 181 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWL-------G 246 G +S E++ L + ++ + +M Y + Sbjct: 182 EGLQSEEDYLKDLEHAKHIMKGNIHIVKTY-----LKEQMLAYAEKLEFEKAESQKQKLA 236 Query: 247 AVNSLEEATTLIRTPAGFDHDGYKILCK 274 +++ + + ++ D D + I+ Sbjct: 237 SLDKFQSKSLVVNPNKVIDTDVFSIISD 264 >UniRef50_A9WT69 UvrABC system protein C n=2 Tax=Actinobacteria (class) RepID=UVRC_RENSM Length = 655 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 96/283 (33%), Gaps = 18/283 (6%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLR 75 P R ++PT PGVY F E + +Y+GK+ N+RSR+ S+ P AM+ Sbjct: 4 PASYRPKTGEIPTDPGVYRFRDEHGRV-IYVGKAKNLRSRLTSYFANPVTLLPKTFAMVH 62 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + + W E+ AL LE IKE P +N R ++ L + + V Sbjct: 63 TATSVQWTIVGSELEALQLEYTWIKEFAPRYNLAFRDDKSYPYLAVTMGEEFPRVQVMRG 122 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYG--LLGLEPLSRGRACFRSALKRCAGA 192 + + FG F A + + T+ + GR C + +CA Sbjct: 123 ERRKGTRYFGPFT-AGAIRETVDTLLRVFPVRTCSPSTFKRAQQSGRPCLLGYIDKCAVP 181 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C G+ S EEH + + + G +M + ++ + Sbjct: 182 CVGRVSAEEHRTLADEFCAFMGGEAKRFIGT-----LEKQMAEAVAELDYERAARLRDDV 236 Query: 253 EATTLIRTPAGF---DHDGYKILCKPLLSGNYEITELDPANDQ 292 A + + I + + + + Sbjct: 237 IALRKVFERNAVVLAEDTSADIFAVHQDELEAAVQVFNVRSGR 279 >UniRef50_Q1Q607 Similar to uvrABC system protein C (UvrC exinuclease) n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q607_9BACT Length = 610 Score = 233 bits (593), Expect = 8e-60, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 94/260 (36%), Gaps = 19/260 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPD-----EAAMLRQ 76 L L ++P PGVYL + +Y+GK+ N+++RV S+ + +++ Sbjct: 1 MSLSLKLKNVPVSPGVYLMKDAKHKV-IYVGKAKNLKNRVRSYFQKGTGDRLYTEYLIKH 59 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVD 135 I ++ T E AL+LE IK+ +P FN LR ++ ++L K Sbjct: 60 VVDIDFVLTETEKEALILENNFIKQFKPKFNINLRDDKNFLCIKLETNKDFPYPKVVRQK 119 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 FG +A+ RA + L+ I D + SR + C + +C G CCG Sbjct: 120 EDDGAMYFGPYASARAVRETLRYINDTIPVRKC-RDNAFKSRTKPCLYYQIHKCLGPCCG 178 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 + + Q + L+ +M + + + ++ Sbjct: 179 LIDRAGYKTLIDQVILLLKGKQEDLISI-----LRKQMYEESKQLRYEKAAKLRDQIQSI 233 Query: 256 TLIRTPAG------FDHDGY 269 D D + Sbjct: 234 EQTVEKQRINSLTFIDRDVF 253 >UniRef50_C6XFB9 Excinuclease ABC subunit C n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFB9_LIBAP Length = 616 Score = 233 bits (593), Expect = 9e-60, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 103/253 (40%), Gaps = 14/253 (5%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAAMLRQSRRISWIC 84 +P PGVY + + LY+GK+ N++ R+ S++ + M+ Q I + Sbjct: 4 EQMPECPGVYQMLDIAGRV-LYVGKAYNLQKRIKSYMHSNNHTHRITHMISQINNIRFTV 62 Query: 85 TAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEVDFSRAPNLF 143 T E+ ALLLEA +IK +P FN LR ++ + + + ++ +Y + + F Sbjct: 63 TCTEVEALLLEANMIKRLKPRFNILLRDDKSFPYILITDKHKIPALYKHRDSSTIQGSYF 122 Query: 144 GLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHA 203 G FA+ A + + ++ L R R C +KRC+G C G+ S E++ Sbjct: 123 GPFASVDAVEKTINSLQRTFFLRSCA-DSVFRHRTRPCLLFQIKRCSGPCTGEISSEKYM 181 Query: 204 LRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPAG 263 + ++ + L + + M Q + +++ L Sbjct: 182 EFVHEAKKFLSGGNHNLKEKI-----ARNMNQATLKEDYESAIIHRD--RLAALSHIQNH 234 Query: 264 FDHDGYKILCKPL 276 D ++ C L Sbjct: 235 NDSIYNRMDCFSL 247 >UniRef50_C2KQB5 Excinuclease ABC subunit C n=2 Tax=Mobiluncus mulieris RepID=C2KQB5_9ACTO Length = 702 Score = 232 bits (592), Expect = 9e-60, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 97/271 (35%), Gaps = 21/271 (7%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLR 75 PE+ ++PT PGVY + + +Y+GK+ N+R+R+ S+ P A M+ Sbjct: 3 PENF-PKPAEIPTAPGVYRWRDAHGRV-IYVGKAKNLRNRLTSYFVDPAKLHPRTAKMVA 60 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEV 134 + +SW+ E+ AL LE IKE P FN + ++ + + + Sbjct: 61 TAESVSWVVVGSEVEALTLEYTWIKEYDPKFNVMFKDDKSYPYFAVTLNQEFPRMGVLRS 120 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGL--LGLEPLSRGRACFRSALKRCAGA 192 R FG + A Q + + + + GRAC + + RC+ Sbjct: 121 AHQRGVRYFGPYTAVWAIRQTSDLLETVFPVRTCTDGVFARARAAGRACLKGYIGRCSAP 180 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C G+ S EH + + + A L++ +M + Sbjct: 181 CIGRISAAEHRELANRVCDFMSG-----HEAGLLRDLENQMWAESKAFRFEEAAKKRDQL 235 Query: 253 EATTLIRTPAGF------DHDGYKILCKPLL 277 EA + D D + + L Sbjct: 236 EALRKVLEKNAVVMDTDTDADLFALAADELQ 266 >UniRef50_Q11YP9 UvrABC system protein C n=3 Tax=Bacteroidetes RepID=UVRC_CYTH3 Length = 596 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 108/263 (41%), Gaps = 11/263 (4%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQ 76 E +RS L +LP+ PGVY F+ + +Y+GK+ ++R RV ++ +M+R+ Sbjct: 5 EDIRSLLKELPSSPGVYRFYSIEKEL-IYVGKAKSLRKRVANYFTNKKNLDQKTRSMVRK 63 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 + E ALLLE LIKE +P +N LR ++ + L+ + Sbjct: 64 IYHAEYTLVNSEYEALLLENNLIKENKPKYNVLLRDDKTYPFICLSSADFPTLTTTRKID 123 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL----SRGRACFRSALKRCAGA 192 + FG + + RA ++++ + L L + + C + C G Sbjct: 124 KKKGEYFGPYTSGRAMHSLVESLRKTFFIRTCDLNLTKQNIDAHKFKVCLEYHIGNCKGP 183 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQ-HPEMTQYHIIQNWLWLGAVNSL 251 C GK+ E++ + + Q L+ + K E Q+ Q + Sbjct: 184 CEGKQEKEDYDVSIIQVRNILKGNFSSVKKYYQEKMLSAAEDMQFEKAQFFKERYNSVLG 243 Query: 252 EEATTLIRTPAGFDHDGYKILCK 274 E ++LI P + + Y I+ + Sbjct: 244 LEKSSLIVNPDINNLEVYTIVKR 266 >UniRef50_Q5LIY7 UvrABC system protein C n=26 Tax=Bacteroidetes RepID=UVRC_BACFN Length = 608 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 116/284 (40%), Gaps = 23/284 (8%) Query: 19 EYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAML 74 + E+L+ +++LP +PG+Y + T+ +Y+GK+ N++ RV S+ + ++ Sbjct: 8 KTSEYLKGIVSNLPEKPGIYQYLNAEGTI-IYVGKAKNLKRRVYSYFSKEHQPGKTRVLV 66 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEV 134 + I +I E ALLLE LIK+ +P +N L+ ++ ++ + + V+ Sbjct: 67 SKIADIRYIVVNSEEDALLLENNLIKKYKPRYNVLLKDDKTYPSICVQNEYFPRVFKTRR 126 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS----RGRACFRSALKRCA 190 + +G +++ + L I L L L P + + C +K CA Sbjct: 127 IIRNGSSYYGPYSHSPSMHAVLDLIKHLYPLRTCNLNLSPENIRAGKFNVCLEYHIKNCA 186 Query: 191 GACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS 250 G C G +S EE+ + + E L+ + Q L A Sbjct: 187 GPCIGLQSQEEYLKNIAEIKEILKGNTQEISRLLY--------------QRMQDLAAEMK 232 Query: 251 LEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRA 294 EEA + A ++ K + N ++ ++ ++ A Sbjct: 233 FEEAQKVKEKYALIENYRSKSEVVSSVLHNIDVFSIEEDGEKSA 276 >UniRef50_D1R706 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R706_9CHLA Length = 614 Score = 232 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 15/246 (6%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-----MLRQSRRISW 82 L+ P PGVYL + + LY+GK+ N+R+R+ + T + ++ Q I Sbjct: 8 LSLYPNHPGVYLMKNRTGMI-LYVGKAKNLRTRIRQYFMTSGDGREMIPFLVPQIESIET 66 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYA---KEVDFSRA 139 I E ALLLE+ LIK+ +P +N L+ ++ AL++N K + + Sbjct: 67 ISVTSEKEALLLESHLIKKHKPKYNALLKDDKSYVALKINVKNPWPMLSLERYRGKPKAD 126 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 FG + + AA + L + L E R R C +KRC C K + Sbjct: 127 GVYFGPYTHAGAARRTLDLLHRLFPLRQC-SDAEFARRTRPCILYDMKRCIAPCVQKCTK 185 Query: 200 EEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIR 259 EE+ +++ ++++ LR L+E + EM Y + G Sbjct: 186 EEYQIQVDRTIKFLRGQ-----NKEILQEMYQEMETYAENLEFEKAGKSLDTIRYIEKTI 240 Query: 260 TPAGFD 265 P D Sbjct: 241 EPQYVD 246 >UniRef50_C3JAE7 Excinuclease ABC subunit C n=2 Tax=Bacteria RepID=C3JAE7_9PORP Length = 604 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 102/277 (36%), Gaps = 23/277 (8%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQS 77 E ++ L LP PG Y ++ + +Y+GK+ N+R RV S+ + ++ Q Sbjct: 4 EEIKKILPTLPLSPGCYQYYNAEGEI-IYVGKAKNLRRRVSSYFQKEHTDRKTRQLVAQI 62 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 + +I A E ALLLE LIK QP +N L+ ++ ++ + + ++ Sbjct: 63 VDVKYIVVANESDALLLENNLIKTYQPKYNILLKDDKSYPSIVVTREPFPRIFVTRTIDP 122 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA----CFRSALKRCAGAC 193 + +G + + A + I + K+ + R C + +KRC C Sbjct: 123 SWGDYYGPYTSVAMAHGMVGIIREMYKVRTCRHRFTQEAIERGKYARCLQYHIKRCEAPC 182 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 G S E++ + ++E L+ +++ M + G + Sbjct: 183 EGLVSREDYLNNIAAAVELLKGNLRQV-----IQQTTSRMLALSEELRYEEAGQEKARLA 237 Query: 254 ATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPAN 290 T K + P + ++ + Sbjct: 238 MLQAYST---------KHIVAPETRHDIDVFSYEEEG 265 >UniRef50_C2MAD2 Excinuclease ABC subunit C n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MAD2_9PORP Length = 602 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 101/243 (41%), Gaps = 15/243 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAAMLRQS 77 + +++ L +P PG Y + ++ T+ +Y+GK+ N+R+RV S+ P ++ + Sbjct: 4 DEIKAILPTIPQEPGCYQYRNKNGTI-IYVGKAKNLRNRVSSYFNNSPKNPKTTRLVSEI 62 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 R++ + E AL+LE LIK P +N L+ ++ + + ++ ++A Sbjct: 63 RQLEYFVVNTEAEALVLENNLIKTHLPKYNILLKDDKSYPRIVITDEPFPRIFATR-KEV 121 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL----SRGRACFRSALKRCAGAC 193 + FG + N A + I +L L P R C + +K+C G C Sbjct: 122 GKGDYFGPYPNVAMAHTVIDLIHRVLQLRSCRYALTPEVVRERRVDLCLQYHIKKCGGPC 181 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 G S EE+ ++ + L+ + ++E+ EM + + E Sbjct: 182 QGFVSAEEYDHSVQLARRILKGEIS-----ILIEEEVEEMNRMSERLEFERAEQHRQNIE 236 Query: 254 ATT 256 Sbjct: 237 VLR 239 >UniRef50_C1SGC9 Excinuclease ABC, C subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGC9_9BACT Length = 599 Score = 231 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 100/244 (40%), Gaps = 14/244 (5%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSR 78 + L ++P PG+YL+ G++ + LY+GK+ N+R+RV S+ + ML+ +R Sbjct: 2 FKPVLKEIPENPGIYLYLGKNGEI-LYVGKAKNLRNRVSSYFVDFESKPIRTRKMLQSAR 60 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 I ++ T E ALLLE +IK ++P +N RL+ ++ + + E+ + + + Sbjct: 61 DIRFVVTTSEAEALLLENNVIKTEKPRYNVRLKDSKSYPFILITEEDYPKLRITR-ESGK 119 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG F + + + + L G G+ C + +++C G C S Sbjct: 120 KGEYFGPFVDVGSLRSIVDELLKVFPLRSC--GDSKFREGKLCLKFQIRKCLGPCENMIS 177 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 + + Q E R + EM + N+ + + + Sbjct: 178 KNRYNQLVEQIREFFRGNVDTVKS-----HMEQEMMRLSDDMNFEEAAIMRDRLRGLSRL 232 Query: 259 RTPA 262 T Sbjct: 233 FTKQ 236 >UniRef50_C7LYI3 Excinuclease ABC, C subunit n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYI3_ACIFD Length = 620 Score = 231 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 60/248 (24%), Positives = 92/248 (37%), Gaps = 14/248 (5%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRR 79 R L +P PG Y F D + +Y+GK+ N+R+RV S+ + +P AML + R Sbjct: 4 RPDLAAIPEAPGSYQFRDGEDRV-IYVGKARNLRARVGSYFQDPRQLSPKTRAMLAVASR 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSR 138 ++WI E ALLLE LIKE P +N RLR ++ + + +R R Sbjct: 63 LTWIVVPSEQDALLLEYSLIKEHHPRYNIRLRDDKSYPMIAVTVGERWPRAMIYRGKRRR 122 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGL--EPLSRGRACFRSALKRCAGACCGK 196 FG +A+ AA + L+ + L + GR C + RC G C G Sbjct: 123 GARYFGPYADAGAAREVLELLRRALPLRTCSPAKLAQHERAGRPCLYFDIGRCVGPCIGA 182 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 + + + L A EM + + A Sbjct: 183 VDEATYRGLVDEVTGFLEGRAGSLVDA-----LETEMHAAASRLEFEEAARLRDRLSAIE 237 Query: 257 LIRTPAGF 264 + Sbjct: 238 AVLERQSV 245 >UniRef50_D2MQ80 Excinuclease ABC, C subunit n=7 Tax=Bacteria RepID=D2MQ80_9FIRM Length = 591 Score = 231 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 95/259 (36%), Gaps = 12/259 (4%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAAMLRQSR 78 E++ + L +LP PG Y + + +Y+GK+ ++ +RV + ++ Sbjct: 4 EYIEAKLAELPHEPGSYQMKNKYGEI-IYVGKAKDLHNRVNQYFVGTHDFKTTKLVSNID 62 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKE-VDFS 137 +I TA E AL+LE LIK+ +P +N + + ++L +++ + Sbjct: 63 DFDFIVTASEKEALILEINLIKKYRPKYNIQFIDDSSYPYIKLTKEKYPRLLIARDTKKD 122 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 + FG F + AA + + + L C L +C G C + Sbjct: 123 KKARYFGPFPDVTAAKNTCKILQSLYPFRRCTTMPKKL-----CLYYHLGQCLGPCEFEI 177 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQ-HPEMTQYHIIQNWLW-LGAVNSLEEAT 255 + + + L+ + + K E Y Q + L +++++ Sbjct: 178 NPKVYDDMCEGVQRFLKGDSKEVEENLYTKMMVAAENRLYEQAQEYKVMLESIHAIVRHQ 237 Query: 256 TLIRTPAGFDHDGYKILCK 274 I D D + + Sbjct: 238 QNIEKDNRGDRDAFAYVVD 256 >UniRef50_A6NZD4 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZD4_9BACE Length = 616 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 53/287 (18%), Positives = 97/287 (33%), Gaps = 22/287 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQ 76 + L+ + LP +PGVY+ + + +Y+GK+ +++RV + T AM+ Q Sbjct: 4 DELKEKAHALPLKPGVYIMQDKH-NVVIYVGKAKALKNRVSQYFADLASHTEKTRAMVSQ 62 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD 135 I E AL+LE+ LIK QP +N L+ ++ ++L + Sbjct: 63 IDHFDVIVADSEFEALVLESSLIKRHQPHYNILLKDDKGYPYIRLTVNEDYPRFSLANKA 122 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGL-LGLEPLSRGRACFRSALKRCAGACC 194 FG + +R + + + KL + + R C + C G C Sbjct: 123 ADDGARYFGPYGSRGSTQGIIDALRAALKLPSCNRRFPRDIGKERPCLNYHMGLCDGYCR 182 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 E + + Q++ L E EM Q + + A Sbjct: 183 FGMPQERYRDAIDQAIRLLEGQFKEVGD-----EIQAEMEQAAEELRFEKAAELRDRYRA 237 Query: 255 TTLIRTPAGF------DHDGYKILCKPLLSGNYEITELDPANDQRAS 295 L+ D D + + L + + A+ Sbjct: 238 IELLGKRQKVMAGSLADTDV---VGFHRGTAKSCFVVLHYVDGELAA 281 >UniRef50_A0M672 UvrABC system protein C n=7 Tax=Bacteroidetes RepID=UVRC_GRAFK Length = 597 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 96/249 (38%), Gaps = 14/249 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQS 77 L L LP PGVY + ++ + LY+GK+ N++ RV S+ + M+++ Sbjct: 4 PALEVQLKTLPNSPGVYQYFDKNGKI-LYVGKAKNLKKRVTSYFNKNHDSHRIGVMVKKI 62 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 I I A E ALLLE LIK+ QP FN L+ ++ + + +R V+ Sbjct: 63 CEIKHIVVASETDALLLENNLIKKHQPRFNVMLKDDKTYPWICIKNERFPRVFPTRRLIK 122 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS----RGRACFRSALKRCAGAC 193 +G F + + L I KL L + + C L C G C Sbjct: 123 DGSEYYGPFTSFKTVNTLLDLIKGLYKLRTCNYDLAEDKIRNGKYKVCLEYHLGNCLGPC 182 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 G + EE+ + + ++ +L+ +M Q+ + + + + Sbjct: 183 EGFQPEEEYNNNIEAIRQIVKGNF-----KDSLQRFRNQMKQHSEKMEFEDAQRIKNKID 237 Query: 254 ATTLIRTPA 262 + + Sbjct: 238 VLENYQAKS 246 >UniRef50_D1PLG8 Excinuclease ABC subunit C n=3 Tax=Ruminococcaceae RepID=D1PLG8_9FIRM Length = 616 Score = 229 bits (585), Expect = 7e-59, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 101/280 (36%), Gaps = 15/280 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQ 76 L LP PGVY+ +SDT+ +YIGK+ +++RV + R M+ Sbjct: 4 AELYRKACMLPLLPGVYIIRDKSDTI-IYIGKAKRLKTRVSQYFREGVPHDAKVTQMIAH 62 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 + I E AL+LEA IK P +N L+ ++ +++ + + A Sbjct: 63 AFTFDVIVCQSEFEALVLEASQIKAHTPKYNILLKDDKGYSYVKVTKGPWPRISAALQKD 122 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLL-GLEPLSRGRACFRSALKRCAGACCG 195 + G F + A + ++ D L +GR C + + +C C G Sbjct: 123 DDGADYIGPFTSSFAVREMVEMAQDCFLLPRCNREFPRDFGKGRPCLNAHIGKCMAVCSG 182 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 K S E + ++ +L +R + +K+ +M ++ + +A Sbjct: 183 KISCEAYNEAVQGALRMIR-----YGKKDIVKQLREKMEAASERLDFETAALLRDQIQAI 237 Query: 256 T--LIRTPAGFDHDGY-KILCKPLLSGNYEITELDPANDQ 292 D D ++ + L + + Sbjct: 238 ERVAAGQKVVMDGDTEMDVIALAGTTRAVCAAVLRYRDGR 277 >UniRef50_Q6MDC8 UvrABC system protein C n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=UVRC_PARUW Length = 610 Score = 229 bits (584), Expect = 7e-59, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 104/262 (39%), Gaps = 21/262 (8%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAM-----LRQSRRI 80 ++ PT PGVYL E + LY+GK+ N+R RV + + + + + I Sbjct: 6 KKIDLFPTLPGVYLMKNEEGEV-LYVGKAKNLRQRVKQYFVPGRDGRLMIPYLVAKINYI 64 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVD---VVYAKEVDFS 137 I E ALLLE LIK+ +P +N L+ ++ AL++++ + + Sbjct: 65 ETIVVTSEKEALLLENNLIKQHKPRYNALLKDDKSYIALKISQNDAWATVRLVRYKGTPE 124 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG + + +AA Q L + L E R R C +KRC G C K Sbjct: 125 PDGLYFGPYTSAQAARQTLDLLNRLFPLRQC-SDQEFARRTRPCLLYQMKRCVGPCTQKC 183 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWL----GAVNSLEE 253 + E+ L ++++ LR LK+ + EM + + +E+ Sbjct: 184 TKGEYQQHLDRTIKFLRGQ-----NKDVLKDLYEEMRLLSEQLEFEKANHLLRTIRYIEK 238 Query: 254 ATT--LIRTPAGFDHDGYKILC 273 + P G D D + Sbjct: 239 TIESQYVDRPLGHDADAIGLFR 260 >UniRef50_B3E0M3 Excinuclease ABC subunit C n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E0M3_METI4 Length = 486 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 99/250 (39%), Gaps = 14/250 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-------ML 74 L+ + DLP +PGVYLF + + +Y+GK+V++ RV + ++ Sbjct: 3 MSLQEKIRDLPHKPGVYLFKDRFNRV-IYVGKAVDLHKRVSQYFHPSRRLRADRKLNALV 61 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKE 133 + + + E A+LLE RLIKE +P +N R +++ ++++ + Sbjct: 62 EAAVDLEYYVVHSEAEAVLLEGRLIKEFRPRYNVSFRDDKRFLLVKVDLSEPFPRFQVTR 121 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 + FG FA+ A L + + L + + C +K C+ C Sbjct: 122 LKKQDNARYFGPFASSSALRTTLNLMKKKFGLRSCSALIPSEKDYKHCLDHIIKNCSAPC 181 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 K S E+ R++ + L + E +M + Q++ + +L E Sbjct: 182 IAKISQAEYLERVKMACAFLEGK-----SKEMIDEIRLKMEEAAQAQDFEKAAELRNLLE 236 Query: 254 ATTLIRTPAG 263 A PA Sbjct: 237 ALEETTRPAR 246 >UniRef50_A9EYQ9 Excinuclease ABC, subunit C n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EYQ9_SORC5 Length = 742 Score = 229 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 93/255 (36%), Gaps = 20/255 (7%) Query: 32 PTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA------MLRQSRRISWICT 85 PT PG YLF ++ + Y+GK+ ++RSRV S+ + A + + + + T Sbjct: 22 PTTPGCYLFIDKAGAVV-YVGKAKSLRSRVRSYFQESGSDARYFIPILRKIVADLETVVT 80 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSRAPNLFG 144 A E A +LE L+K+ +P FN +LR ++ L+L +K ++ FG Sbjct: 81 ATEKEAAVLENELVKQHKPRFNVKLRDDKDFLCLKLDTQKAWPMLETVRRPAPDKARYFG 140 Query: 145 LFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHAL 204 + + +A + L + +L E SR R C + +KRC C E + Sbjct: 141 PYHSATSARRTLHLVNKHFQLRTC-SDTEMASRRRPCLQYQIKRCLAPCVMDVDRELYTE 199 Query: 205 RLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPA-- 262 +R L G E M + A +R Sbjct: 200 MVRSVALFLEGRHDELTG-----ELTTRMRDASRELEFERAAIYRDQLRAVEAVREAQRV 254 Query: 263 ----GFDHDGYKILC 273 D D I Sbjct: 255 VYVKDVDQDVVGIYR 269 >UniRef50_UPI0001C3237F excinuclease ABC, C subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3237F Length = 647 Score = 229 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 92/257 (35%), Gaps = 10/257 (3%) Query: 12 FEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE- 70 A E + L LP +PGVYLF T+ +Y+GK+ +I+ RV SH P Sbjct: 19 SAVEAARERDQRLAEQRRALPDQPGVYLFRNAKSTV-IYVGKAKSIKKRVASHFSNPSTQ 77 Query: 71 --AAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVD 127 +L RI + + E ALL E IK+ +P FN RLR ++ + ++ ++ Sbjct: 78 MGRDLLPMIDRIESLVVSTEAEALLAEQNFIKQYKPRFNIRLRDDKSYPYIGISLDEDFP 137 Query: 128 VVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALK 187 VY R FG ++N + + L + G C +K Sbjct: 138 RVYFTRERHRRERAYFGPYSNAKRVRETLDLLGKIFLFRSCDGPTPGRRSGSPCLDYYIK 197 Query: 188 RCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGA 247 RC C + E + + ++ L + A+ M Q + Sbjct: 198 RCEAPCVDYVTKEHYRTSIDGVIDFLSGRYRAIEAAI-----EANMKDAAAEQRFEDAAR 252 Query: 248 VNSLEEATTLIRTPAGF 264 + + + Sbjct: 253 ERNRLRSIRSLLERQRV 269 >UniRef50_B2S367 UvrABC system protein C n=4 Tax=Treponema RepID=UVRC_TREPS Length = 691 Score = 228 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 93/257 (36%), Gaps = 13/257 (5%) Query: 15 AAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEA 71 E LR P+ GVYL+ + +Y+GK+ ++R+R+ S+ R P Sbjct: 2 RPSESLVETLRIQALSAPSTSGVYLWKDVHG-VVIYVGKAKSLRTRLTSYFRCRHDPKTR 60 Query: 72 AMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYA 131 ++ ++ + ++ T E ALLLE LIK+ P +N L+ + L+L + ++ Sbjct: 61 VLMSRAAALEYLQTQHEYEALLLENTLIKKHTPRYNICLKDGKTYPLLKLTCEPFPRIFR 120 Query: 132 KEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAG 191 FG F + + L+ I K+ R C LKRC Sbjct: 121 TRQFCQDGARYFGPFPDVQILDSFLKLILRTYKIRTCT---TLRKRKNPCLYYHLKRCDA 177 Query: 192 ACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSL 251 CCG S + + + L + M + + + + Sbjct: 178 PCCGWVSPRTYQKDIHEITLLLEGNIDA-----TVARLEKRMKRAVRQEAFEAAARIRDD 232 Query: 252 EEATTLIRTPAGF-DHD 267 +A I + D D Sbjct: 233 IQAIRCITHKSLVQDMD 249 >UniRef50_C1F4W9 UvrABC system protein C n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=UVRC_ACIC5 Length = 645 Score = 228 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 58/250 (23%), Positives = 98/250 (39%), Gaps = 14/250 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQ 76 L+ + LPT PGVYL+ + +Y+GK+ N+RSRV S+L +++R+ Sbjct: 1 MDLQEKIRTLPTGPGVYLYKNADGEV-IYVGKAKNLRSRVRSYLLEASQANAKTGSLMRE 59 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD 135 + + +I E AL LE LIK+++P FN LR ++ ++L R V+ Sbjct: 60 AVDLDYITVGNEHEALALENNLIKQRKPRFNVLLRDDKTYPYVKLTLGDRYPKVFVTRRL 119 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 +G F A + + I L + L RAC + +KRC G C Sbjct: 120 RKDGAAYYGPFFPGNLAYRIVDLIHRSFLLPSCKVDLSRYHA-RACLQYYIKRCLGPCVK 178 Query: 196 K-ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 + E + +R + L GA + M + + + L Sbjct: 179 HLTTPEAYREAVRDAQWFLEGR-----GADLERSLEVRMQEAAAAEQFELAAKYRDLLVT 233 Query: 255 TTLIRTPAGF 264 ++ Sbjct: 234 LHQLQEKQRV 243 >UniRef50_Q5GSR4 UvrABC system protein C n=10 Tax=Wolbachia RepID=UVRC_WOLTR Length = 606 Score = 227 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 110/263 (41%), Gaps = 17/263 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQS 77 + ++ + P GVY G+ D + LY+GK+ N++SR+ ++LR + ML Q Sbjct: 8 QAIKKQIELSPQSCGVYQMIGDKDKV-LYVGKAKNLKSRLSNYLRYENLSERTKFMLSQV 66 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 ++ + T EI ALLLEARLIK +P +N + R + +++ + F Sbjct: 67 IKVEVLVTENEIDALLLEARLIKSLKPPYNIIFKDGRSYPYIVISKHNYPRIAQYRGKFK 126 Query: 138 RAP-NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 + + +G F + A Q + ++ L S R C +KRC+ C GK Sbjct: 127 KGEFHYYGPFISVAAVKQTMLSLQKTFLLRVC-SDQYFASTKRPCIEYQIKRCSAPCVGK 185 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 + +++ ++Q+ + L + K+ M + +N+ + Sbjct: 186 ITKDDYCQSVKQTRDTLLGRNEKVK-----KQLSSTMEKCSKEENYELAAIYRDRLKFLE 240 Query: 257 LIRTPA-----GFDHDGYKILCK 274 I+ + D D + I K Sbjct: 241 QIQMQSMDFSFEKDADFFGIARK 263 >UniRef50_Q3BWL1 Excinuclease subunit n=5 Tax=Xanthomonas RepID=Q3BWL1_XANC5 Length = 287 Score = 227 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 125/271 (46%), Positives = 181/271 (66%) Query: 18 YEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQS 77 Y YPEHLR + LP GVY FHG+ +PLYIGKSVN+R+RV+ H RT +EA++LRQ+ Sbjct: 17 YAYPEHLRDCVEALPKTAGVYTFHGKEGLLPLYIGKSVNVRTRVMDHCRTLEEASLLRQT 76 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 +S I AG+ GA LLEA+++K Q PL+NK LR+ + +++L V +V++ E D + Sbjct: 77 TSVSCIPMAGDTGARLLEAQMVKRQMPLYNKLLRKVPRQFSIRLYRGEVSIVHSAEYDVA 136 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 +P L+GL+++ ++A ++L+ IAD+ +LCY L+GLE L GR CFR+ LKRCAGAC G E Sbjct: 137 SSPMLYGLYSSPQSAQKSLRRIADDHRLCYALVGLERLPSGRPCFRAMLKRCAGACSGGE 196 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + ++H RLR +L RL + WP+ G +AL+E+ + Q H++ W +LG V +L A L Sbjct: 197 TLDDHEERLRAALIRLELSTWPFHGRIALEEKGENLRQLHVLDAWHYLGTVTTLTAARKL 256 Query: 258 IRTPAGFDHDGYKILCKPLLSGNYEITELDP 288 P GFD D Y+I+ + SG IT L P Sbjct: 257 KGEPLGFDRDSYRIIRAAIESGLDAITVLGP 287 >UniRef50_B2RM62 UvrABC system protein C n=4 Tax=Bacteroidetes RepID=UVRC_PORG3 Length = 600 Score = 226 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 103/282 (36%), Gaps = 25/282 (8%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQS 77 + L L LP +PG Y + E + +Y+GK+ N+R RV S+ ++RQ Sbjct: 5 DELNIILPTLPEKPGCYQYFDEDGKV-IYVGKAKNLRRRVSSYFYKEHADRKTRILVRQI 63 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 R I +I E ALLLE LIKE QP +N L+ + ++ + + ++A Sbjct: 64 RSIKYIVVDSEGDALLLENSLIKEYQPRYNVLLKDGKTYPSIVIKREPFPRIFATRDIKK 123 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS----RGRACFRSALKRCAGAC 193 FG + A L+ + + + L L R R C + +K+C G C Sbjct: 124 DGSEYFGPYPGALIAKGMLRLVKEIYPIRTCKLDLREEKIRQGRYRVCLQYHIKKCKGPC 183 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 G ++ E+ + + + LR ++ M Y + E Sbjct: 184 IGNQTSNEYESNVSEIRDLLRGNLHRL-----VRMYRDRMQAYSEELRFEEAQICKERIE 238 Query: 254 ATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRAS 295 K P N ++ D D+ + Sbjct: 239 LLERYEA---------KHTVVPRNIDNVDVFSYDE--DEHTA 269 >UniRef50_Q3M542 UvrABC system protein C n=11 Tax=Cyanobacteria RepID=UVRC_ANAVT Length = 627 Score = 226 bits (575), Expect = 9e-58, Method: Composition-based stats. Identities = 62/284 (21%), Positives = 102/284 (35%), Gaps = 21/284 (7%) Query: 21 PEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLR 75 PE L + L+++P PGVY SD + +YIGKS +RSRV S+ R T A M + Sbjct: 14 PERLEARLSEIPPEPGVYFMRDGSDRI-IYIGKSRKLRSRVRSYFREGYNKTERIATMAK 72 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEV 134 I +I T E AL LEA LIK+ QP FN L+ +++ + + + ++ Sbjct: 73 LVTEIEFIVTDTEAEALALEANLIKQHQPYFNVLLKDDKKYPYVCITWSEDYPRIFITRK 132 Query: 135 DF--SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGA 192 +G + + + L+ L +PL + R C L RC G Sbjct: 133 RQLGKEKDKYYGPYTDSGLLREILRISKRIFALRQR---PQPLFKDRPCLNYDLGRCPGV 189 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C S EE+ +++ + +M + N+ + Sbjct: 190 CQQLISPEEYRKTVQKVAMVFQGRTQELIDI-----LSEQMEKAAEALNFEVAARIRDQI 244 Query: 253 EATTLIRTPAGF----DHDGYKILCKPLLSGNYEITELDPANDQ 292 + D + + + I Q Sbjct: 245 AGLKSLTAEQKVSLPDDTVSRDAIALAADAQHACIQLFQIRAGQ 288 >UniRef50_C6X0K5 Excinuclease ABC subunit C n=9 Tax=Bacteroidetes RepID=C6X0K5_FLAB3 Length = 611 Score = 226 bits (575), Expect = 9e-58, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 104/261 (39%), Gaps = 20/261 (7%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAAMLRQSR 78 +L L LP+ PGVY ++ ++D + LY+GK+ +++ RVLS+ M+ + Sbjct: 17 NLELQLKTLPSEPGVYRYYDKNDQL-LYVGKAKHLKKRVLSYFNKNLPGYRTRIMVAKIH 75 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 R+ E ALLLE LIKE QP +N L+ ++ + + + ++ Sbjct: 76 RLETTIVPSEYDALLLENNLIKEHQPFYNVMLKDDKSYPWICIKNEDFPRIFLTRTMIKD 135 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS----RGRACFRSALKRCAGACC 194 +G +A R A L TI KL L L P + + C +K C G C Sbjct: 136 GSEYYGPYARVRPAKVLLDTIKHIYKLRTCTLNLSPPKIAEGKYKVCLEFHIKNCQGPCE 195 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 ES E++ L++ ++ + + +M +Y + V + Sbjct: 196 MLESKEDYDLKIDAIRGIIKGDFKRAKEYLV-----NQMMKYAENLQFEDAHVVKERLDM 250 Query: 255 TT------LIRTPAGFDHDGY 269 + P D D + Sbjct: 251 LENYQHKHTVVNPNIDDVDVF 271 >UniRef50_D1Y7G8 Excinuclease ABC, C subunit n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y7G8_9BACT Length = 575 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 55/244 (22%), Positives = 95/244 (38%), Gaps = 12/244 (4%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQS 77 +R+ L LP +PGVYL H E+ + +Y+GK+ ++ RV S+ P +++ Sbjct: 9 RIRAILRTLPLKPGVYLMHDETGKV-IYVGKAKKLKRRVSSYFNHRDFAIPRLRKLVQTV 67 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 + IS+I T E A ++E+RLIK QP FN L+ + + + ++ V Sbjct: 68 QDISFIRTETESEAFIVESRLIKAIQPFFNVELKMGSRYPFIVVTAEKFPRVLVTHTRP- 126 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 + +FG + + A L I + + LE R C + +C G C GK Sbjct: 127 KTGRVFGPYTSAGAMRSMLNMIKNFFPARNCSMNLEKEKLARPCIMYDIGKCLGPCAGKC 186 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + +E+ + L L A + P M + + Sbjct: 187 TEKEYGETVDDILMLLSGQT-----ADLVARLRPRMERLAKEMRFEEAAKARDTIRDLWK 241 Query: 258 IRTP 261 Sbjct: 242 FSRQ 245 >UniRef50_A7HD93 UvrABC system protein C n=5 Tax=Bacteria RepID=UVRC_ANADF Length = 716 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 95/262 (36%), Gaps = 22/262 (8%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPD------EAAMLR 75 +LR L++LP PG YL + Y+GK+ ++RSRV S+ A + Sbjct: 3 ANLRKTLDELPAEPGCYLMKDRRGAVV-YVGKASSLRSRVRSYFDASRGDDRAFVALLDE 61 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEV 134 + I T E A+LLE LIK +P FN RLR ++ L+L+E + + Sbjct: 62 LLGDVEVIVTRSEKEAVLLENELIKRHRPRFNIRLRDDKDFIVLRLDERHAFPRLEVRRA 121 Query: 135 DFSR--APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGA 192 R FG +++ + + L+ + +L R R C +KRC Sbjct: 122 REPRRAGARYFGPYSSASSIRETLRVVNRHFQLRTCT-DHVFEHRKRPCILYQIKRCPAP 180 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C E+ + ++E L ++ H M + + + Sbjct: 181 CVYDVPEAEYRQSVEDAIEFLEGRETEL-----VERLHGRMDEAADALRFEDAARLRDQL 235 Query: 253 EATTLIRTPAGF------DHDG 268 +A D D Sbjct: 236 QAVERSLEKQRVLMADRADRDV 257 >UniRef50_Q26GF0 Excinuclease ABC, C subunit n=5 Tax=cellular organisms RepID=Q26GF0_9BACT Length = 599 Score = 224 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 99/265 (37%), Gaps = 20/265 (7%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRR 79 L + LPT PGVY ++ + + LY+GK+ N++ RV S+ + +M+++ Sbjct: 6 LEVQIRILPTTPGVYQYYDKDHKL-LYVGKAKNLKKRVSSYFTKNHDSYRIKSMVKKIVT 64 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRA 139 I I E+ ALLLE LIK + P +N LR ++ L + ++R V+ Sbjct: 65 IEHIVVETEMDALLLENSLIKNRNPRYNIMLRDDKTYPWLCIKKERFPRVFLTRRMIKDG 124 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLS----RGRACFRSALKRCAGACCG 195 +G F++ + L I L L + + C + CAG C Sbjct: 125 SEYYGPFSSVKTVRALLDLIKGLYPLRTCKYDLSADKINAGKYKVCLEYHIGNCAGPCEN 184 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEAT 255 S +A + ++ A K +M + + + E Sbjct: 185 LMSETAYAENIDNVRNIVKGDY-----KNASKHFESQMMELASNMQFEDAQRIKEKLEIL 239 Query: 256 TLIRTPAGF------DHDGYKILCK 274 ++ + D D + ++ Sbjct: 240 QKYQSKSTVVNSKITDVDVFSLISD 264 >UniRef50_C7N5B1 Excinuclease ABC, C subunit n=6 Tax=Coriobacteriaceae RepID=C7N5B1_SLAHD Length = 666 Score = 223 bits (568), Expect = 7e-57, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 107/290 (36%), Gaps = 36/290 (12%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQS 77 + ++ L +PT PGVYL+ + + +Y+GK+ +R+R+ ++ D+ A ++ Q Sbjct: 8 QDIKHQLASVPTLPGVYLWKNKDGEV-IYVGKAKQLRARMRQYVNFQDDRAKIPLLVDQI 66 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKEVDF 136 +I E AL+LE LI + P FN + N+ + L + + Sbjct: 67 DSFEYIVVENEHEALVLEKNLINQYAPFFNADFKDNKSYPFIALTKGDVFPAIKYTREKH 126 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLC--YGLLGLEPLSR--------------GRA 180 + FG + + RAA Q + + LC + R Sbjct: 127 VASTRYFGPYTDGRAARQLVDIVRKVVPLCSSSCAEWRRLKKKLDNDDLTAFLSETGTRP 186 Query: 181 CFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQ 240 CF + + GACCG+ + E++ + + + L + ++E EM + Sbjct: 187 CFDAHVGLGPGACCGQITPEDYRRHVERVEKFLSGRRTEF-----IEELTQEMMEAAADL 241 Query: 241 NWLWLGAVNSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPAN 290 ++ + S + + + + N ++ + Sbjct: 242 DFERAARLKSRIDT---------INSLTDRQHAVSSRNLNADVVGIHREE 282 >UniRef50_Q2SSM4 UvrABC system protein C n=5 Tax=Mollicutes RepID=UVRC_MYCCT Length = 584 Score = 223 bits (567), Expect = 9e-57, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 92/248 (37%), Gaps = 14/248 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSR 78 +L+ ++ L +PG YLF + + + +Y+GK+ N++ RV ++ ++R+ Sbjct: 1 MNLKEQVDLLTNKPGCYLFLNKDNEV-IYVGKAKNLKKRVSTYFNKAYNIKTTRLIREIT 59 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 + + E +LLLE LIK+ +P +N L ++ + + ++ + + Sbjct: 60 HLKYFIVDNEKESLLLEKNLIKKYRPKYNVLLNDDKTYPYIIITNQKDPMYKYVRKYEKK 119 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 A +G A L T+ L L + C L +C+GAC Sbjct: 120 ALRNYGPLPIGSNARSILLTLQRLFPLRMCKGDL-----KKPCLYYHLNQCSGACFKTVD 174 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 + +++Q + + + + +M + + + + I Sbjct: 175 SSYYEYQIKQVDKFFKGEINQVKQTLV-----KQMQKASDNLQFEQAKRIKDQITSLDFI 229 Query: 259 RTPAGFDH 266 D Sbjct: 230 TAKQNVDI 237 >UniRef50_D0L0M1 DNA polymerase III, epsilon subunit n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0M1_HALNC Length = 481 Score = 222 bits (566), Expect = 9e-57, Method: Composition-based stats. Identities = 103/280 (36%), Positives = 143/280 (51%), Gaps = 12/280 (4%) Query: 20 YPEHLR-SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAAML 74 P HL ++++P PGVYL +G +PLYIGKS+++R RVL H R E + Sbjct: 200 LPPHLAPERIDEIPDTPGVYLMYG-DGALPLYIGKSIHLRRRVLDHFRNDHREQKEMRLA 258 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEV 134 + + I WI T GE+ ALLLE+RLIK PLFN++LRR R LC V Sbjct: 259 QAVQHIDWIETPGELSALLLESRLIKTLSPLFNRKLRRTRDLCTWHWVFGNVQPPRLLRG 318 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 D + +G F + A Q L+ +A + LC LGL+ S CF +KRC G C Sbjct: 319 DDVIPGSCYGPFRHATQAKQVLRELAAKHGLCDIRLGLQSGSG--PCFAHQIKRCRGVCV 376 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEM-TQYHIIQNWLWLGAVNSLEE 253 G+ES +H LRL +LE LR+ WP+ G V L E +H+I W+ G ++ E Sbjct: 377 GQESPMQHDLRLATALEELRIKQWPYDGPVVLHESDDHTGASWHVIDQWVHWGTAHNEAE 436 Query: 254 ATTLIRTP-AGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 ++ P FD D Y IL + L +T L +D+ Sbjct: 437 LDAVLEHPRPNFDRDTYLILLRHLD--PARVTPLSSRSDR 474 >UniRef50_D2LI59 Excinuclease ABC, C subunit n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LI59_RHOVA Length = 689 Score = 222 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 115/287 (40%), Gaps = 21/287 (7%) Query: 11 EFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---- 66 E A+A P+ + ++ L T PGVY + + +Y+GK+ N+++RV ++ R Sbjct: 17 EDAASAPETGPQVIHRYVKHLGTGPGVYRMVDLAGEV-IYVGKARNLKNRVQNYTRMGGH 75 Query: 67 TPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV 126 T AAM+R + + ++ T E ALLLEA LIK +P +N R ++ + + + Sbjct: 76 TNRIAAMIRATATMEFVNTRTEAEALLLEANLIKRFKPRYNVSFRDDKSFPYIVIRRDQE 135 Query: 127 -DVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSA 185 + + + FG FA+ A + + T+ L SR R C Sbjct: 136 AAQIAKHRGARTVKGDYFGPFASAGAVNRTINTLQRAFLLRTCA-DSVYDSRTRPCLLFQ 194 Query: 186 LKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWL 245 +KRCAG C + ++++ + ++ L Q ++ + M + + Sbjct: 195 IKRCAGPCTREIPLDDYSKLVDEATAFLSGKTDAVQ-----RKLNTLMEEAAEALEFERA 249 Query: 246 GAVNSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 + A ++ G + P ++ + Q Sbjct: 250 AKYRNRLWALAHVQAHQGIN---------PKGVEEADVFAIAQQGGQ 287 >UniRef50_D0LVJ3 Excinuclease ABC, C subunit n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LVJ3_HALO1 Length = 689 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 57/275 (20%), Positives = 99/275 (36%), Gaps = 24/275 (8%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-------MLRQS 77 + F +PT PGVYL S + Y+GK+ N+R+RV + R +A + R Sbjct: 11 KEFFERIPTAPGVYLMKDRSGRVV-YVGKAKNLRTRVRQYFRPGADARFFVAAGLLARVL 69 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDF 136 I + E ALLLE LIK+ QP FN LR ++Q L+++ V Sbjct: 70 ADIDTVVVDNEKEALLLENHLIKKHQPRFNINLRDDKQYLVLRIDPNADYPRVEVVRNIR 129 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 FG + + + + L+ + +L +R R C + +KRC G C Sbjct: 130 DDQARYFGPYHSATSCRETLRLLNRHFQLRTCT-DHVLRTRTRPCLQYQIKRCPGPCVYP 188 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 + +A ++ + L M+ Y + + + +A Sbjct: 189 VERDAYAEQVDDVMMFLAGKNDQLVTR-----LRERMSSYAEREEFEAAARLRDSIQA-- 241 Query: 257 LIRTPAGFDHDGYKILCKPLLSGNYEITELDPAND 291 D + + ++ + D Sbjct: 242 -------VDKTLARQNVVQEQFLDQDVFGMWREGD 269 >UniRef50_D1B5F2 Excinuclease ABC, C subunit n=2 Tax=Synergistaceae RepID=D1B5F2_THEAS Length = 479 Score = 221 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 13/247 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQ 76 E L + LP RPGVY+ + +Y+GK+ +R RV+S+ R +P ++ Sbjct: 4 EALMKHVRSLPERPGVYIMRDRDGNV-IYVGKAKALRRRVMSYFRHGNFASPRLRKLVET 62 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF 136 IS + TA E AL+LEARLI++ +P FN L+ + + +++ ++R V V Sbjct: 63 VHDISVMRTATEAEALILEARLIRQLKPFFNVELKMSERYPYIRVTQERFPRVMVTRVRK 122 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 G + R + L+ + L +EP R C A+ +C C G Sbjct: 123 GE-GLFIGPYVKVRELRELLRLLDRFFPLRKCSFPIEPPYDRRPCIYHAIGKCLAPCAGL 181 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYH-IIQNWLWLGAVNSLEEAT 255 + + +++ L+ GA ++ M + + + A Sbjct: 182 CDEGTYRRMVAEAVMLLQGR-----GADLVERLKRRMEDAAYNRLAFEEAAHIRDMIRAI 236 Query: 256 TLIRTPA 262 + A Sbjct: 237 WRVGRQA 243 >UniRef50_B0MPX2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPX2_9FIRM Length = 585 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 89/246 (36%), Gaps = 13/246 (5%) Query: 40 FHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRRISWICTAGEIGALLL 94 ++ + +Y+GK+ +++RV ++ ++ +I T E+ AL+L Sbjct: 1 MKDKTGRI-IYVGKAKALKNRVTTYFHALESHNAKTRKLVENIYDFDFIVTPSELDALVL 59 Query: 95 EARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQ 154 E LIK+ P +N L+ ++ +++ ++ + + G F + A Q Sbjct: 60 ECSLIKQYNPKYNILLKDDKGYNYIKITKEPYPRISYALNCNDKNAEYLGPFTSGFTAKQ 119 Query: 155 ALQTIADEQKLCYG-LLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLERL 213 A+ + + + R C +KRC G C GK +E+ + ++E + Sbjct: 120 AVDEVNRIFMFPSCHKVFPRDFRKERPCLNYHIKRCMGVCTGKIKQDEYNSLIHSAIEYM 179 Query: 214 RVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPAGFDHD-GYKIL 272 + +++ +M + + + A ++ D Y Sbjct: 180 QN-----GSKASVERLTEQMYEASENLEFEKAAKLRDRINAIEKMKDGQDIFSDKTYDFD 234 Query: 273 CKPLLS 278 L Sbjct: 235 VVALAQ 240 >UniRef50_B1XZE9 Excinuclease ABC C subunit domain protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XZE9_LEPCP Length = 275 Score = 219 bits (558), Expect = 8e-56, Method: Composition-based stats. Identities = 136/271 (50%), Positives = 170/271 (62%), Gaps = 11/271 (4%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRISWICT 85 L LP+ PGVYLFHGES +PLYIGKSVNIRSRVLSHLR P EA ML Q+RR++WI T Sbjct: 6 EDLRALPSAPGVYLFHGES-ALPLYIGKSVNIRSRVLSHLREPGEARMLLQTRRVTWIRT 64 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDV----VYAKEVDFSRAPN 141 AGEIGALLLE+RLIK QQPL+NK+LRR+R+LC+ + + V VY+++VDF+ Sbjct: 65 AGEIGALLLESRLIKAQQPLYNKQLRRSRELCSWRFCGSQPAVAPALVYSRDVDFAVTDG 124 Query: 142 LFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEE 201 LFGLF + AA L A +LC LGLEP +R R CF L RC G C G+ES Sbjct: 125 LFGLFRSAHAAKDFLIDTAQAHRLCLVALGLEPATR-RGCFGLQLGRCDGVCVGRESAAS 183 Query: 202 HALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVN-----SLEEATT 256 HALR+ Q+L + V WP+ GAV L E+ + Q H+++NW ++ Sbjct: 184 HALRVAQALAQCAVQRWPFPGAVGLVERDGDWVQTHVVRNWRHERTLDVGGAQDARPPLA 243 Query: 257 LIRTPAGFDHDGYKILCKPLLSGNYEITELD 287 AGFD D Y+IL KPLL G E L+ Sbjct: 244 DPGAGAGFDLDAYRILVKPLLDGGCERIHLE 274 >UniRef50_B9LUM9 UvrABC system protein C n=9 Tax=Halobacteriaceae RepID=UVRC_HALLT Length = 592 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 64/277 (23%), Positives = 104/277 (37%), Gaps = 17/277 (6%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSH--LRTPDEAAMLRQSRRIS 81 +R DLPT PGVY F + LY+GK+VN+R+RV S+ R+ M+ ++ RI Sbjct: 6 VRERAADLPTEPGVYQFR--AGETTLYVGKAVNLRNRVRSYADPRSGRIRGMVGRADRIE 63 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPN 141 + T E ALLLEA LIK +P +N RL+ ++ + + + V + D Sbjct: 64 FAVTDTETQALLLEANLIKRLRPRYNVRLKDDKSYPLVAITDHPVPRIEVTR-DPEEGAV 122 Query: 142 LFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEE 201 +G F ++ ++ I DE +L G + +R R C + C+ C G+ E Sbjct: 123 AYGPFTSKGRVETVVKAIRDEYRLR-GCSDHKYANRDRPCLDYEMGICSAPCTGEIDPES 181 Query: 202 HALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTP 261 +A + + M + + EA Sbjct: 182 YAEDVAAARRFFEGETGVLADP-----LRRRMEAAAENAEFERAANLRDRLEAVEAFHGE 236 Query: 262 AGF------DHDGYKILCKPLLSGNYEITELDPANDQ 292 G D +L + + L Q Sbjct: 237 GGEAVSDHSDDRTVDVLAAAVEGDTARVARLHSERGQ 273 >UniRef50_A8GXA7 Excinuclease ABC subunit C n=2 Tax=Rickettsia bellii RepID=A8GXA7_RICB8 Length = 356 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 61/258 (23%), Positives = 102/258 (39%), Gaps = 17/258 (6%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQSRRI 80 ++ L +PT PG+YL + + +YIGK+ N++ R+ + + A M+ Q + Sbjct: 6 IKKLLPLVPTLPGIYLMYNSDKEI-IYIGKAKNLKKRLNYYSKNNLRGRIARMVHQVYLV 64 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDFSRA 139 + T E A LLE +LIK+ QP FN LRR++ ++L ++ + +D S Sbjct: 65 EYKVTISESEAFLLETQLIKQHQPRFNILLRRDKSASYIKLRSDHDFPTLVKCYLDNSTG 124 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 LFG F + + + KL + R R C + +C C G S Sbjct: 125 NKLFGPFTSGHQIDLIITELQKIFKLRTC-SDSDFAFRKRPCLEYEIGKCFAPCTGNISK 183 Query: 200 EEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL-- 257 E++A + Q + L G +ALK M ++ + L Sbjct: 184 EDYAELIEQINDFLSSNIEKLLGKLALK-----MQALSDHSHFEKAALIRDRINLIKLSK 238 Query: 258 ----IRTPAGFDHDGYKI 271 + D D I Sbjct: 239 LRIGKQYEGIIDADVIVI 256 >UniRef50_Q255T2 UvrABC system protein C n=17 Tax=Chlamydiaceae RepID=UVRC_CHLFF Length = 604 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 104/273 (38%), Gaps = 25/273 (9%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-----DEAAMLRQSRRISWI 83 +P PGVYL S + LYIGK+ N+R+R+ ++ + +++++ I I Sbjct: 9 KIIPPSPGVYLMKDSSGEV-LYIGKAKNLRNRITTYFQKQGDSRERIPFLMKKTTDIETI 67 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD---FSRA 139 + E ALLLE LIK+ P +N L+ ++ L ++ + A S+ Sbjct: 68 LVSNETEALLLENNLIKKYHPKYNVLLKDDKTFFCLAISLSHPWPRIDAIRTKAVTSSKK 127 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 +FG + + A L+ I L E +R R C +KRC C S Sbjct: 128 QIVFGPYVSAEACQTLLEVIGQWFPLRTC-SNREFSTRKRPCILYEMKRCLAPCVNFCSQ 186 Query: 200 EEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIR 259 EE+A L +++ L+ +++ + + Q + G + Sbjct: 187 EEYAETLEKAVLFLKGQVSE-----IIQKLEKSIEKASQEQKFEQAGMYYRTLKLIQQAM 241 Query: 260 TPAGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 + ++ N + L + + Sbjct: 242 VKQHVEKFHFQ---------NIDAIGLYRKHQE 265 >UniRef50_C0QPW8 Excinuclease ABC subunit C n=5 Tax=Aquificales RepID=C0QPW8_PERMH Length = 580 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 58/247 (23%), Positives = 96/247 (38%), Gaps = 13/247 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQS 77 E L++ +++ P PGVYLF G+ +YIGK+ NI++R+ HL P E + +S Sbjct: 11 EDLKNLIDEAPQSPGVYLFKGKKGE-YIYIGKAKNIKNRLKGHLNQYRIDPKEKKIFDES 69 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 +I WI T + A +LE LIK+ +P +N RL+ L + + V Sbjct: 70 SKIEWIITKSDYEAFVLENELIKQYKPKYNVRLKSGSGYPMLVITDDEYPTVVISRKFGE 129 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG F R A I +L R CF L C+ C K Sbjct: 130 IEGEYFGPFLPARTARAMKDLIHKLFRLRTCD---PLPKRDIVCFDYHLGLCSAPCVNKI 186 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 S +++ ++ + L + + + + +Y N+ V A Sbjct: 187 SKKDYNFDVKAAKAFLSGDVKKF-----IYRLYDRLEEYKNKLNFEKASVVRDQILAMEN 241 Query: 258 IRTPAGF 264 + + Sbjct: 242 LISKQEV 248 >UniRef50_C8WI08 Excinuclease ABC, C subunit n=3 Tax=Coriobacteriaceae RepID=C8WI08_EGGLE Length = 737 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 107/283 (37%), Gaps = 31/283 (10%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQS 77 E ++ LN +PT PGVYL+ +S + +Y+GK+ +R+R+ ++ DE A ++ Q Sbjct: 60 ERIKEELNSVPTLPGVYLWKDKSGQV-IYVGKAKQLRARMRQYVNFQDERAKIPLLVDQI 118 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKEVDF 136 +I E +L+LE LI + P FN + ++ + L + + Sbjct: 119 DSFDYIVVENEHESLVLEKNLINQHAPFFNADFKDDKSYPFIALTKGDVFPAIKYTREKH 178 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLC--YGLLGLEPLSR------------GRACF 182 FG + + RAA + LC + R R CF Sbjct: 179 RADTKYFGPYTDSRAARDMVDIARRVVPLCATSCADWRQLKRRLEKDPLALMSHDARPCF 238 Query: 183 RSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNW 242 + + GACCG + E++ + +++ L + + E EM + ++ Sbjct: 239 DAHVGLGPGACCGGITPEDYRVHVKRIERFLSGQHREF-----VDELQAEMQEAAAELDF 293 Query: 243 LWLGAVNSLEEATTLIRTPAG------FDHDGYKILCKPLLSG 279 + + + + D D + + ++G Sbjct: 294 ERAARIKARIDTINSLTDKQHAVSTRNLDADVVGLFREETVAG 336 >UniRef50_Q21VB4 DNA polymerase III, epsilon subunit n=7 Tax=Betaproteobacteria RepID=Q21VB4_RHOFD Length = 476 Score = 218 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 112/291 (38%), Positives = 165/291 (56%), Gaps = 19/291 (6%) Query: 18 YEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAM 73 P L + + D+P GVY+F+G +PLYIGKS+ +RSRVL+H R P E M Sbjct: 184 ATLPPQLETRVADIPESVGVYIFYG-EGPLPLYIGKSIKLRSRVLAHFQAASRAPREMRM 242 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV--DVVYA 131 ++ RRI W+ TAGEIGALLLEARL+KE+QP +N+RLRR LCA +L + + ++ Sbjct: 243 AQEIRRIEWLETAGEIGALLLEARLVKERQPAYNRRLRRESTLCAWRLADDPLARPLLSL 302 Query: 132 KEVD---FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKR 188 + ++G++ ++ AL +L+ +AD Q LC LGLE +GR CF + R Sbjct: 303 VRGEALQPQEFGQMYGVYRSKNQALSSLRELADSQGLCLQALGLE-SGKGR-CFAHQIGR 360 Query: 189 CAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKE--QHPEMTQYHIIQNWLWLG 246 C G CCG+ES E H LRL+ +L + +++ WP+ G V L+E E T HI W L Sbjct: 361 CQGVCCGEESPERHHLRLQLALAQQKLLVWPYPGKVGLREYNARSERTDIHIFDQWCHLA 420 Query: 247 AVNSLEEATTLIRTPA--GFDHDGYKILCKPLLS---GNYEITELDPANDQ 292 V+ E T + + + FD D Y++L K + + G +E+ + Q Sbjct: 421 TVHDETELTDALGSRSTLAFDLDTYRLLLKHIAAPGKGKFELIDWTEKQQQ 471 >UniRef50_D2RRA5 Excinuclease ABC, C subunit n=2 Tax=Halobacteriaceae RepID=D2RRA5_9EURY Length = 597 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 100/292 (34%), Gaps = 29/292 (9%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSH--LRTPDEAAMLRQSRR 79 + +R LP PGVY F E LY+GK+V++RSRV S+ RT M+ ++ Sbjct: 4 DGVRERAKSLPREPGVYQFRAE--GTTLYVGKAVDLRSRVRSYADPRTARIRRMVDRADE 61 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRA 139 I T E ALLLEA LIK QP +N RL+ ++ +QL + + A Sbjct: 62 IEIAVTDTETQALLLEANLIKRHQPRYNVRLKDDKSYPMVQLTDHEAPRIEITRDPDGEA 121 Query: 140 -------------PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSAL 186 P +FG F N+ ++ + + + G + R R C + Sbjct: 122 QGASSASGGAASGPTVFGPFTNKGQVETVVKALRETYGVR-GCSDHKYSGRDRPCLDYEM 180 Query: 187 KRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLG 246 C C + E +A + EM QN+ Sbjct: 181 GLCTAPCTREIDLESYAQDVTAVERFFEGETGILADP-----LRREMEAAAEDQNFERAA 235 Query: 247 AVNSLEEATTLIRT------PAGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 + E + D +L + + + L + Sbjct: 236 NLRDRLETVETFHGEGGEAVQSVGDERAVDVLGVAIEGEDATVARLRAERGK 287 >UniRef50_UPI0001977D11 excinuclease ABC subunit C n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI0001977D11 Length = 627 Score = 217 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 58/280 (20%), Positives = 110/280 (39%), Gaps = 36/280 (12%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR------------TPDEAAMLR 75 L +LPT+PG+Y + + D + LY+GK+ N+++R+ S+ + A M+ Sbjct: 22 LQNLPTQPGIYQYFDKDDNL-LYVGKAKNLKNRIKSYFSIHNDIITPKANLSQRIALMVS 80 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKEV 134 Q +I + T + AL+LE LIK +P +N LR ++ + ++ Sbjct: 81 QVAKIHTLLTQSQEDALILENSLIKSLKPKYNILLRDDKTYPYIYIDTSATFPRFEITRK 140 Query: 135 D-FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 S+ FG F + A + L ++ D L L +AC + +C C Sbjct: 141 ALQSKHIEYFGPFVSG--ARELLDSLYDALPLVQKKSCL---KGKKACIFHQIHKCPAPC 195 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 K S ++A + Q+ + ++ +M + + + Sbjct: 196 ENKISQSQYAEYITQAKAFIDDR------KGLIEILESKMQILSHNLQFEEAAKIRDRIQ 249 Query: 254 ATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQR 293 ++T + D ++SG+Y+I LD A Sbjct: 250 KLKTLKTQSIID----------IMSGDYDIFLLDSAGQNH 279 >UniRef50_A9BGW2 UvrABC system protein C n=1 Tax=Petrotoga mobilis SJ95 RepID=UVRC_PETMO Length = 574 Score = 216 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 98/259 (37%), Gaps = 22/259 (8%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR------TPDEAAMLRQSR 78 RS LN++P +PGVY+F P+YIGK+ N+++RV S+ ML ++ Sbjct: 4 RSILNNIPKKPGVYIFKNNKGD-PIYIGKAKNLKNRVSSYFNKKNYIGNEKTYEMLEKAT 62 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 + +I T+ E A +LEA LI +P +N L+ R + + +++ + Sbjct: 63 NLDYIITSNENQAFILEANLIYIHKPKYNIMLKDTRVYPYILVTDEQFPKIKYIRTKKEE 122 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 +G +++ + ++ + K+ L + + CF L RC G C Sbjct: 123 KGKFYGPYSDVKFVKDVIEVLQSVYKIRSCDRDL--GRKSKPCFLYHLGRCYGPCYKDVD 180 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS-------- 250 + + + + L + M Y I+N+ + Sbjct: 181 ETVYQESVEKVKKVLSGDIEEVKNY-----LQKAMMDYAKIKNYEKAAQMRDTLFKLENL 235 Query: 251 LEEATTLIRTPAGFDHDGY 269 EE + D Y Sbjct: 236 FEEVAVEYKNGKNLDIIMY 254 >UniRef50_Q2FPC6 UvrABC system protein C n=16 Tax=Archaea RepID=UVRC_METHJ Length = 520 Score = 216 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 96/240 (40%), Gaps = 16/240 (6%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAAMLRQSRRISWI 83 L +P PG Y F E+ T+ LY+GK+ N++ RV S+ + P ++ R I I Sbjct: 6 LTTIPEEPGCYQFKDETGTI-LYVGKAKNLKKRVSSYFQKKSITPRIDILVSLIRDIDVI 64 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRA-PNL 142 T+ E+ AL+LE LIK+ QP +N L+ + +Q++ + + L Sbjct: 65 VTSSEVEALILENNLIKKYQPKYNIDLKDAKSYAFIQISNDPFPRIGIARDRTVKKTGTL 124 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 +G F + Q L+ + L RAC RS L CA C GK S E+ Sbjct: 125 YGPFVSAAERDQILKFVKQTFHLRTCKKM-----TKRACLRSHLGTCAAPCTGKISEPEY 179 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPA 262 ++ + L+ + + EM + + + + A + Sbjct: 180 QYLVKSADYLLKGKSQDL-----IYDLRKEMETFAAAEEYEKALVIRDRIAAIENLSERQ 234 >UniRef50_B8FTB6 Excinuclease ABC C subunit domain protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FTB6_DESHD Length = 376 Score = 216 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 102/252 (40%), Gaps = 12/252 (4%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSR 78 L+ L DLP +PGVYL + +Y+GK+ N+++RV + R P M+ + Sbjct: 7 LKEKLKDLPEQPGVYLMQDSLGNI-IYVGKAKNLKNRVSQYFYKQKDRDPKVEEMILRIA 65 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSR 138 + E+ ALL E RLIKE +P +N++++ +++ +++ ++ + + + Sbjct: 66 DWEYRIVDTELDALLEECRLIKEIKPHYNRQMKNHQKYVYIKIPDESFPRLDIVQEREAG 125 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 +G F++R A++ ++D + G C L C G C GK S Sbjct: 126 GGIYYGPFSSRHRVETAVEGLSDIFLIRKCSAPGR-SKGGNGCLYRQLGTCVGVCTGKVS 184 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 EE+ RL A+KE M + N+ I Sbjct: 185 SEEYRERLDGVC-----QAIEAGDKGAMKELSSRMARAVEGLNFEMAARYREYLLGLRYI 239 Query: 259 RTPAGFDHDGYK 270 + F Y+ Sbjct: 240 QGRQKFLKGTYR 251 >UniRef50_B7J223 UvrABC system protein C n=22 Tax=Borrelia RepID=UVRC_BORBZ Length = 603 Score = 216 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 94/243 (38%), Gaps = 14/243 (5%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAAMLRQSRR 79 +L + LPT G Y E+ + LYIGK+ N+RSRV S+ + +++ + Sbjct: 7 NLFEKVIKLPTTSGCYKMLNENKKI-LYIGKAKNLRSRVKSYFLEKNSHKIKILMKNVKS 65 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRA 139 I I T E ALLLE LIK +P +N +L+ + +++ ++ ++ + Sbjct: 66 IEVITTNSEYEALLLECNLIKTHKPDYNVKLKDGKGYPMVRITHEKYPRIFKTRKIINDK 125 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 FG F N + Q L I K+ C + +C G C + Sbjct: 126 SEYFGPFTNVKKLDQVLDFINKTFKIRKC-----KKKSNAPCLYYHMGQCLGVCYKENLE 180 Query: 200 EEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIR 259 +E+ L ++ L + +K +H +++ + + + I Sbjct: 181 KEYQKELDKAKSILNGNISEISSQIDIKLKH-----AIQKEDFETAIKLKEIRNSLIEIN 235 Query: 260 TPA 262 Sbjct: 236 QIQ 238 >UniRef50_Q1LGD6 DNA polymerase III, epsilon subunit n=5 Tax=cellular organisms RepID=Q1LGD6_RALME Length = 530 Score = 216 bits (549), Expect = 9e-55, Method: Composition-based stats. Identities = 106/277 (38%), Positives = 155/277 (55%), Gaps = 9/277 (3%) Query: 18 YEYPEHLRSF-LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAA 72 P L L+D+P RPGVYLF+G D +PLY+GKS+++R R+ +H E Sbjct: 212 ASLPAGLEEAALDDVPDRPGVYLFYG-DDDVPLYVGKSIHLRQRIRAHFAGDHSNAREMR 270 Query: 73 MLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK-RVDVVYA 131 + R RR+ W T GEIGALL EA L+K +PL N LR+N +L + ++ + + + Sbjct: 271 LSRSVRRVEWRETGGEIGALLSEAHLVKTLRPLHNHLLRQNTELFSWEMLDGLPAPRLRS 330 Query: 132 KE-VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL-SRGRACFRSALKRC 189 VDFSR L+G F +R +A L+++ADE +LC L LE RG CF L RC Sbjct: 331 DRHVDFSRHAALYGAFPSRASAQARLRSLADEHRLCLATLMLEGTTRRGSPCFARQLHRC 390 Query: 190 AGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVN 249 AGAC G+ES H R +++ + + WP+ GA+A +E + +HII++W +LG+ Sbjct: 391 AGACTGEESQTAHRERTVEAMASMAIQRWPFAGAIAWREASGDRFPWHIIEDWCYLGSAP 450 Query: 250 SLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITEL 286 +LE+A + PA FD D Y+IL + L Sbjct: 451 TLEDAARQLVAPARFDIDTYQILAPRIEELKASAVPL 487 >UniRef50_B9KXM0 DNA polymerase III, epsilon subunit n=2 Tax=Thermomicrobia (class) RepID=B9KXM0_THERP Length = 693 Score = 216 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 90/241 (37%), Gaps = 13/241 (5%) Query: 25 RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRR 79 + L D P PGVYL + LY+GK+ N+R RV S+ T +L Sbjct: 283 QRLLADTPELPGVYLMRDALGRV-LYVGKARNLRQRVRSYFSQPLGYTRKMDGLLESVAE 341 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR-VDVVYAKEVDFSR 138 I + T E+ ALLLE++ ++ +P +N +LR + +++ R + Sbjct: 342 IETVVTGSELEALLLESQFVQRYKPPYNTQLRNHEAYPYVKVELGRPWPRLMLARQRDDD 401 Query: 139 APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR-GRACFRSALKRCAGACCGKE 197 G F + AA ++ + L GR C + L RC G C G Sbjct: 402 DAVYVGPFRSTAAARSVVELLHQLLPLRTCHRSFRDARSYGRPCLQLTLGRCIGPCTGCV 461 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 + +E+ + +L L V ++ + ++ + L + Sbjct: 462 TPDEYRALVDCALRYLSGETS-----VVVERAQQLLADAVERLDFERAARLRDLLRRSEE 516 Query: 258 I 258 + Sbjct: 517 L 517 >UniRef50_B4U9X0 UvrABC system protein C n=3 Tax=Aquificaceae RepID=UVRC_HYDS0 Length = 565 Score = 216 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 103/262 (39%), Gaps = 16/262 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQS 77 + + + P PGVY+F + +YIGK++NI+ R+L HL ++ EA + S Sbjct: 1 MDIVALIEKAPEEPGVYIFKNQ--KHYIYIGKAINIKKRLLQHLKEREQSKKEANIFNHS 58 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFS 137 + + WI T E ALLLE LI+ +P +N L+ + L + V D S Sbjct: 59 KELEWIVTRNEYEALLLEMDLIRTHKPKYNVLLKHGSGYPVILLTDDEYPTVKITR-DTS 117 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 FG F N AL+ + I +L E R C L C+G C Sbjct: 118 EKGEAFGPFLNINKALKIKKLIHATFRLRTCE---EMPKRPTPCMDYHLGLCSGPCANLI 174 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSL-EEATT 256 S E++A+ ++ + L L + ++ QY + + Sbjct: 175 SKEDYAISVKSAKAFLSGNV-----KDVLPTLYEKIEQYASNLAFEKAAFLRDQVLVLQN 229 Query: 257 LIRTPAGFDHDGYKILCKPLLS 278 ++ F +D ++ L Sbjct: 230 IVDGQGVFLYDIEEVDVFYLEG 251 >UniRef50_C3XLG8 Excinuclease abc subunit c n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XLG8_9HELI Length = 618 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 105/274 (38%), Gaps = 31/274 (11%) Query: 19 EYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----------T 67 ++L L +P GVY + + LY+GK+ N++ R+ S+ R + Sbjct: 7 PLSQNLLETLKKIPNSSGVYHYFDTQGKL-LYVGKAKNLKHRIKSYFRFTPNLAPAPNLS 65 Query: 68 PDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRV 126 P M+ Q + +I E AL+LE LIK+ +P +N LR ++ L ++ ++ Sbjct: 66 PRITQMVSQIAHLRYIVVENENDALILENSLIKQLKPKYNVLLRDDKTYPYLCVDLQEDF 125 Query: 127 DVVYAKEVDFSRAP-NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSA 185 + F + FG F++ A L +I + L + +AC Sbjct: 126 PRILLTRKIFKKQGLRYFGPFSSG--ARDLLDSIYEIFPLAQKESCK---NGKKACLFYQ 180 Query: 186 LKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWL 245 + RC C GK S +++A L+ +LE + L +M Q + Sbjct: 181 IHRCLAPCEGKISTKDYAKILQNALECVE------NPKKILAPLEQKMLQLSQNLRFEEA 234 Query: 246 GAVNSLEEATTLIRTPAG------FDHDGYKILC 273 + + + D D + ++C Sbjct: 235 LILRDRIAKIKNLTPLSSVDFANLVDLDIFALVC 268 >UniRef50_C1DM13 Excinuclease ABC protein, subunit C n=1 Tax=Azotobacter vinelandii DJ RepID=C1DM13_AZOVD Length = 282 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 144/280 (51%), Positives = 188/280 (67%), Gaps = 3/280 (1%) Query: 8 PRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT 67 + A +YEYPEHLR + +P PGVYLF+G+SD++PLYIGKSV+IR+R+L+HLRT Sbjct: 4 TKRPLRPAELYEYPEHLRERIASMPKAPGVYLFYGDSDSLPLYIGKSVDIRARLLAHLRT 63 Query: 68 PDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVD 127 P+EA +LRQ+RRI I TAGEIGALLLE+RLIKE QPL+NKRLR R+L +++L + R + Sbjct: 64 PEEARLLRQTRRIEHIRTAGEIGALLLESRLIKELQPLYNKRLRCQRRLYSIRLADGRPE 123 Query: 128 VVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALK 187 VV A R L+GLF +RR A + L +AD +LC GLLGLE GRACFR+ + Sbjct: 124 VVEAV--PPDREQALYGLFRSRRVAGERLLEMADRHRLCLGLLGLERHEPGRACFRTQIG 181 Query: 188 RCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGA 247 RCAGAC G+ESHE HA RL +L ++ CWP+ G VAL E + YH++ W +LG Sbjct: 182 RCAGACAGRESHEAHAARLLAALTEWQLFCWPYPGPVALHEHGEGLRDYHVVDRWHFLGT 241 Query: 248 VNSLEEATTLIRTP-AGFDHDGYKILCKPLLSGNYEITEL 286 SL+ A P FD D Y+IL +P+L G + L Sbjct: 242 YASLKAARKAPAGPLPRFDADSYQILLRPILQGGAGVVPL 281 >UniRef50_Q6SI31 Excinuclease ABC, C subunit n=1 Tax=uncultured marine bacterium 105 RepID=Q6SI31_9BACT Length = 622 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 89/261 (34%), Gaps = 20/261 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQS 77 + L+ ++ LP +PGVYL+ + +Y+GK+ +R RV S+L +P A+L Sbjct: 4 QDLKVQISTLPEQPGVYLYFNGAGD-TIYVGKASVLRDRVRSYLSAHGASPRIDALLDDV 62 Query: 78 RRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEKRVDVVYAKEVDF 136 + I T AL LE LIK + P +N LR ++ LQL + V Sbjct: 63 ESLEIIVTDSVAEALALENNLIKHRAPKYNVLLRDDKNYPYLQLTTNEAFPRVLVSRRVQ 122 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 G F A + + + + R R C +KRC C Sbjct: 123 RDGAFYAGPFLPTALARKTMLLTHRLFGIRSCNEVITG-RRDRPCLEYDIKRCLAPCVAN 181 Query: 197 E-SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE-A 254 S E +A + + L L MTQ +++ Sbjct: 182 VCSQERYAEAVEHTRMFLEGRNHEL-----LNTLTSRMTQAAKNEHFEQAAEWRDAIRTI 236 Query: 255 TTLIRTPAGF------DHDGY 269 L D D + Sbjct: 237 KALRHRQQKMSLPTLGDRDAF 257 >UniRef50_Q7V7L7 UvrABC system protein C n=43 Tax=Cyanobacteria RepID=UVRC_PROMM Length = 667 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 102/269 (37%), Gaps = 24/269 (8%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT-----PDEAAMLRQ 76 L L ++P PG YL D + LY+GKS +R+RV S+ R+ P M+RQ Sbjct: 32 NRLEQRLKEIPAEPGCYLMRDVEDRL-LYVGKSKCLRNRVRSYFRSSSDHGPRIRLMVRQ 90 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK---RVDVVYAKE 133 I +I T E +L+LE+ LIK QQP FN L+ +++ L + + + Sbjct: 91 IAEIEFIVTDSEAESLVLESNLIKNQQPHFNVLLKDDKKYPYLCITWSEEYPRIFITRRR 150 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 ++ +G + + + L + L PL + R C ++ RC G C Sbjct: 151 RFRNKNDRFYGPYVDVGLLRRTLLLVKRSFPLRQR---PRPLHQDRTCLNYSIGRCPGVC 207 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 K + +++ LR+ + + +M +Y ++ + + Sbjct: 208 QQKITPQDYHQVLRKVAMVFQGRNQELK-----VLLEKQMERYSDRMDYESAANIRDQIK 262 Query: 254 ATTLIRT-------PAGFDHDGYKILCKP 275 + + D I Sbjct: 263 GLEQLTEGQKMSLPDSSVSRDVLAIASDH 291 >UniRef50_B9XGZ6 Excinuclease ABC C subunit domain protein n=2 Tax=Verrucomicrobiales RepID=B9XGZ6_9BACT Length = 559 Score = 214 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 99/262 (37%), Gaps = 15/262 (5%) Query: 19 EYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDE-------A 71 +RS LN+LP +PG+YL T+ +Y+GK+ ++R RV + + Sbjct: 2 AVSALIRSKLNELPHKPGIYLMKDRFGTV-IYVGKARDLRKRVSQYFHPSRKMGWDLKFK 60 Query: 72 AMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVY 130 A+ + E ALLLE +LIKE P +N + +++ L++N + Sbjct: 61 ALTEAIYDLDVHVVRSEPEALLLEGKLIKEFHPRYNISFKDDKRFLMLKVNLNDPIPRFT 120 Query: 131 AKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCA 190 FG FA+ A L I + L + C LK C Sbjct: 121 LTRFKQDDGARYFGPFAHSSALKNTLTMIRRQFHLRGCRPLTPNERDYKHCLYGNLKHCT 180 Query: 191 GACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS 250 C G + E++ +++ + + L G ++ EM + Q++ + Sbjct: 181 APCIGNVTREQYLAQVQAACDFLSGQ-----GEEMQEQLAEEMKKAAAAQDYERAAMLRD 235 Query: 251 -LEEATTLIRTPAGFDHDGYKI 271 + + + F+ Y + Sbjct: 236 AISDLRQTTKKTVKFERLPYNL 257 >UniRef50_C7RVE9 Exonuclease RNase T and DNA polymerase III n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVE9_9PROT Length = 469 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 114/286 (39%), Positives = 164/286 (57%), Gaps = 17/286 (5%) Query: 20 YPEHLR-SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAML 74 P HL + L+DLP PGVYLF+G++D + LY+GKSVN+R RV +H R E + Sbjct: 185 LPPHLDSALLDDLPESPGVYLFYGDNDAL-LYVGKSVNLRQRVRAHFASDLREYKEMRLS 243 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-----NEKRVDVV 129 ++ RR+ W T GE+GALLLE+RLIKE QP+ N RLRR+ LC QL + R+ +V Sbjct: 244 QEVRRLRWQETVGELGALLLESRLIKECQPIHNHRLRRSSDLCTWQLVQVAPGDCRLRLV 303 Query: 130 YAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLE-PLSRGRACFRSALKR 188 + DF R+ +LFGLFANRR A +L+ +A LC +LGLE P GR CF +K Sbjct: 304 SGQTADFVRSNDLFGLFANRREATDSLRKVAAANGLCPIILGLEKPAGPGRPCFSHQVKH 363 Query: 189 CAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQH--PEMTQYHIIQNWLWLG 246 C GAC GKE+ H+ R+ +L +L++ WP+ GA+ + E+ + + H++ W LG Sbjct: 364 CRGACVGKEAIGVHSDRMLSALMKLKLTAWPYPGAIGVVERDDLRRVEEVHVVNGWRHLG 423 Query: 247 AVNSLEEATTLI---RTPAGFDHDGYKILCKPLLSGNYEITELDPA 289 + S ++ FD D Y++L L G ++ L Sbjct: 424 SARSEVGVQEILLGQSGQGRFDRDTYRLLAAHLGKGRVQVRLLTER 469 >UniRef50_A9A4M1 Excinuclease ABC, C subunit n=2 Tax=Thaumarchaeota RepID=A9A4M1_NITMS Length = 528 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 95/240 (39%), Gaps = 17/240 (7%) Query: 30 DLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAAMLRQSRRISWICTA 86 +PT PG+YL T+ +YIGK+ N++ RV S+ + +++ I ++ T Sbjct: 9 TIPTDPGIYLMKDSDGTI-IYIGKAKNLKKRVKSYFLKNQNYKTQKLVQNISDIEFVLTD 67 Query: 87 GEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEV----DFSRAPNL 142 E A LLE+ +IK+ +P FN L+ ++ L++++++ + F Sbjct: 68 NESEAFLLESNMIKKYRPRFNIELKDQQRYTYLRISDEKYPRLLVARRTRDGKFLGKGKT 127 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 FG F + L + + ++ + C L C G C ++ + + Sbjct: 128 FGPFTQGSSKLLTIGALRKAFQIRIC-----KTLPKKVCLEYHLGNCEGPCEFNDAQDRY 182 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNS-LEEATTLIRTP 261 + E L+ Q + K+ EM Q +Q + + L +L Sbjct: 183 PKHVAALEEVLKGKN---QTKIFTKKLEEEMHQAAELQQFERAKDIRDTLIRLGSLQTKQ 239 >UniRef50_B9M422 UvrABC system protein C n=8 Tax=Desulfuromonadales RepID=UVRC_GEOSF Length = 622 Score = 212 bits (541), Expect = 9e-54, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 98/271 (36%), Gaps = 23/271 (8%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSRRISW 82 + P+ PGVY+ T+ LY+GK+ ++R R+ S+ ++ + I + Sbjct: 7 IGHFPSSPGVYIMKDAEATV-LYVGKARDLRKRIRSYFAASGDSRYQIRFLMARVTDIQF 65 Query: 83 ICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAPN 141 I T E AL+LE LIK+ +P +N LR ++ +L+++ + Sbjct: 66 IVTDTEKEALILENTLIKKYRPKYNFNLRDDKTYFSLRMDMSSDFPRLSIIRKVTRDGAR 125 Query: 142 LFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEE 201 FG +++ A L+ + L + + R R C LK+C+ C GK S E+ Sbjct: 126 YFGPYSSASDARAVLKHLYKLFPLRHYPME-TCRRRNRPCLFYQLKQCSAPCHGKISRED 184 Query: 202 HALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTP 261 + + L LK M+ + + L + + Sbjct: 185 YMALAEGAALFLEGK-----NREILKIFRERMSAAAAAEKYEKAARFRDLIRSIEVTVEK 239 Query: 262 AGFDHDGYKILCKPLLSGNYEITELDPANDQ 292 G+ ++ +Q Sbjct: 240 QK----------VVAQGGDSDVIGFYREGEQ 260 >UniRef50_Q7NBC4 UvrABC system protein C n=1 Tax=Mycoplasma gallisepticum RepID=UVRC_MYCGA Length = 592 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 103/281 (36%), Gaps = 19/281 (6%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPD---EAAMLRQSRR 79 +L+ L+ P +PG YL+ + + +YIGK+ NI RV + P + ++ + Sbjct: 4 NLKQKLDLAPKKPGCYLWKNHLNEI-IYIGKAKNIYKRVHQYFNGPKDLKTSKLVNEIFY 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRA 139 + +I E ALLLEA LIK+ +P +N L+ N + + +++ + + Sbjct: 63 VEFIEVNNENEALLLEANLIKKHKPRYNILLKDNNGYPYILMTKEKYPRLIYTRNFDPKK 122 Query: 140 PNLFGLFANRR-AALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 +G FA+ A + L +GR C L C AC + S Sbjct: 123 GKHYGPFASSEMKAYDLYNLLLKLFPLKNC-----FNKKGRKCEFYDLNLCMKACTHEVS 177 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLI 258 ++ + ++ LK+ + + ++ L++A LI Sbjct: 178 EADYEVMKKKIDYFFHNGADQV-----LKDLKEKESIASEKFDFEQAKKYLDLQKAINLI 232 Query: 259 RTPAGFDHDGYK----ILCKPLLSGNYEITELDPANDQRAS 295 + K +L + I + Q S Sbjct: 233 FDKQIINLYSAKERIDVLAYQIKENVICIVLFSYVSSQLVS 273 >UniRef50_A8ESX8 UvrABC system protein C n=26 Tax=Epsilonproteobacteria RepID=UVRC_ARCB4 Length = 616 Score = 212 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 111/287 (38%), Gaps = 31/287 (10%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----------TPDE 70 +L+ L LP GVY + ++ + LYIGK+ +++RV S+ + +P Sbjct: 1 MNLQEKLQQLPNDAGVYQYFDKNGHL-LYIGKAKILKNRVKSYFKFTPKLQPADKLSPRI 59 Query: 71 AAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVV 129 M+ + WI E AL+LE LIK+ +P +N LR ++ + ++ ++ + Sbjct: 60 YKMISEVESCEWIVVPNEHDALILENSLIKQLKPKYNILLRDDKTYPYIFVDFDEDFPRL 119 Query: 130 YAKEV-DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKR 188 S++ FG ++ A L +I + L + +AC +++ Sbjct: 120 DITRRIQKSKSIKYFGPYSTG--ARDMLDSIYEIVPLVQKKSC---VKGKKACLFYQIQK 174 Query: 189 CAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAV 248 C C K S EE+A + +LE + + + + + +M QY + + Sbjct: 175 CLAPCENKISKEEYAKIVENALEYI------YNKTKLISKLNEKMLQYSNDFRFEEAMTL 228 Query: 249 NSLEEATTLIRTPAGFDH------DGYKILCKPLLSGNYEITELDPA 289 + + + D D + I + + D Sbjct: 229 RDRIKTIEKSQIKSDIDLATNEDIDIFAINANNKKAVIVRMFLRDGK 275 >UniRef50_A4SZE6 DNA polymerase III, epsilon subunit n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SZE6_POLSQ Length = 466 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 102/272 (37%), Positives = 148/272 (54%), Gaps = 15/272 (5%) Query: 17 IYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAA 72 P R ++ +P PG Y+F+G + PLYIGKS+++R+RV+ H + E Sbjct: 188 PSLPPNIDRDLIDSIPDTPGCYIFYG-DNKTPLYIGKSISLRNRVMGHFQGALTQRKEMK 246 Query: 73 MLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAK 132 + Q R I WI T+GE+GAL+LE+RLIKE+ P N +LRR++ LC L E V+ + Sbjct: 247 LSLQIRDIDWIETSGELGALILESRLIKERMPSMNIKLRRSKDLCGWSLVEDESGVLLPQ 306 Query: 133 EVDFSR-----APNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALK 187 V + NL+GLF ++R A L+ IA + LC LLGLE G++CF +K Sbjct: 307 LVTHHQLAPGLQENLYGLFYSKREAHSYLKAIAKKHHLCEALLGLEKRVEGKSCFGYQVK 366 Query: 188 RCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGA 247 +C GAC H L+L+ LE ++ WP+ G +A+KE EM +I W +LG Sbjct: 367 QCGGACLNLTPITLHNLQLKTVLELFKIQVWPYSGPIAIKE-GGEMI---VIDKWCYLGT 422 Query: 248 VNSLEEATTLIRT-PAGFDHDGYKILCKPLLS 278 + +E L + A FD D YKI+ K L Sbjct: 423 AINQDELYELAESGDAEFDLDIYKIVKKALSG 454 >UniRef50_Q2NJ78 UvrABC system protein C n=3 Tax=Candidatus Phytoplasma RepID=UVRC_AYWBP Length = 589 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 105/275 (38%), Gaps = 26/275 (9%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAAMLRQSRRI 80 L + LP PG YLF DT+ +Y+GK+ N++ RV S+ A ++ +++ Sbjct: 4 LLEKIKTLPPNPGCYLFKNTKDTI-IYVGKAKNLKKRVQSYFTKRNNLKTAMLIEETQDF 62 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 +I T E AL+LEA LIK P +N +L ++ +++ +++ + Sbjct: 63 FYIITNNEQEALILEANLIKTHTPKYNFKLLDDKTYPYIEITKEKHPQLKISRFKQIPPG 122 Query: 141 N-LFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 +FG + N ++ + L+ + L L + + C + +C GAC GK Sbjct: 123 KIIFGPYPNLKSTKETLKLLHLLYPLRRCQL-----ASKKPCLHFHINQCLGACAGKT-- 175 Query: 200 EEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIR 259 + + + L+ LK+ H M + + + ++ Sbjct: 176 INYKPNIDAITKFLKGNI-----KDILKKLHHLMQKASEKMFYEKAQEYRDIIDSIKQTT 230 Query: 260 TPAGFDHDGYKILCKPLLSGNYEITELDPANDQRA 294 + K N +I DQ A Sbjct: 231 KKQLISNQKLK---------NCDIFAYAFNQDQIA 256 >UniRef50_Q3SKJ9 DNA polymerase III, epsilon subunit n=4 Tax=Proteobacteria RepID=Q3SKJ9_THIDA Length = 470 Score = 211 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 118/283 (41%), Positives = 163/283 (57%), Gaps = 16/283 (5%) Query: 19 EYPEHLR-SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAM 73 P HL + L DLP PGVYLF+GE+D + LY+GKSVN+R RV SH R + Sbjct: 189 ALPPHLDPALLEDLPESPGVYLFYGEND-VLLYVGKSVNLRQRVFSHFAADTREYKAMQL 247 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-----KRVDV 128 +Q RR+ W T GE+GALLLE+RLIKE P N+RLRR +LCA +L+E R + Sbjct: 248 TQQVRRVEWRETVGELGALLLESRLIKEGAPAHNRRLRRASELCAWRLDEVAPGDFRPVL 307 Query: 129 VYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSR-GRACFRSALK 187 V A + DF R +LFG F++RR A AL+ IAD +LC +LGLE +R CF ++ Sbjct: 308 VTADDPDFGRDGDLFGPFSSRRQATLALRKIADAHQLCPVVLGLEKPARPDSPCFAFQVQ 367 Query: 188 RCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHP--EMTQYHIIQNWLWL 245 +C GAC GKE+ H+ RL +L + ++ W + GA+ L E+ ++ + H++ W +L Sbjct: 368 KCRGACAGKETAGLHSARLMAALAKTKMKSWAYPGAIGLVERDDFLDVEEVHVVHAWRYL 427 Query: 246 GAVNSLEEATTLIRTPAG--FDHDGYKILCKPLLSGNYEITEL 286 G S E L+ A FD D YK+L L + I L Sbjct: 428 GTAKSEAEIGELLEHAARAPFDLDTYKLLKTQLAKSKFTIRAL 470 >UniRef50_C7N8N1 Excinuclease ABC, C subunit n=12 Tax=Fusobacteriaceae RepID=C7N8N1_LEPBD Length = 594 Score = 211 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 96/256 (37%), Gaps = 23/256 (8%) Query: 27 FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSRRIS 81 D+PT PGVYL E + +Y+GK+ N+++RV S+ +++ + I Sbjct: 10 KYKDIPTHPGVYLMKNERGKI-IYVGKAKNLQNRVKSYFMNINSHNQKTMELVKNIKDIE 68 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKE--VDFSRA 139 + E+ AL+LE LIK+ +P +N L+ + ++ +++ V + Sbjct: 69 FFICKSEVEALILENNLIKKNKPKYNILLKDEKTYPYIKFTKEKFPKVEIVRSTKKLNEN 128 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 FG + A++T+ + ++ + + C + +K C C K+ Sbjct: 129 AEYFGPYP--MGIFFAMKTLLKIFPMRDCNRSMDKI--TKPCLKYYMKTCPAPCKYKDIE 184 Query: 200 EEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT--- 256 +E++ ++ L+ ++ M ++ + Sbjct: 185 DEYSTNVKNFKNFLKGHSDKV-----IEMLESRMKKFSDEMEFERAINEREKLAVLKRML 239 Query: 257 ---LIRTPAGFDHDGY 269 +I D D + Sbjct: 240 ETQIIEYSKEIDEDVF 255 >UniRef50_Q8REL0 UvrABC system protein C n=10 Tax=Bacteria RepID=UVRC_FUSNN Length = 589 Score = 210 bits (534), Expect = 5e-53, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 95/253 (37%), Gaps = 23/253 (9%) Query: 30 DLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISWICT 85 D+P GVYL + +Y+GK+ N+++RV S+ + +++ I + T Sbjct: 7 DIPESSGVYLMK--KNNKVIYVGKAKNLKNRVSSYFNRVHESEKTNELVKNIEDIEFFLT 64 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDF---SRAPNL 142 EI ALLLE LIK+ P +N L+ + ++++++ + ++ Sbjct: 65 NTEIDALLLENNLIKKYSPKYNILLKDEKTYPFIKISKEDFSSIKIVRTTKALDIKSGEY 124 Query: 143 FGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 FG + A + + K+ ++ S R C + +K C G C K+ EE+ Sbjct: 125 FGPYP--YGAWRLKNILMKLFKIRDCNRDMKKTSP-RPCLKYYMKSCTGPCVYKDIKEEY 181 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPA 262 + + L+ + E M + ++ + I + Sbjct: 182 NKDVENLKQVLKGNTSKL-----INELTALMNKASQDMDFEKSIIYREQIKELKSIASSQ 236 Query: 263 GF------DHDGY 269 D D + Sbjct: 237 IIQYERELDEDIF 249 >UniRef50_D1N623 Excinuclease ABC, C subunit n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N623_9BACT Length = 505 Score = 210 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 103/269 (38%), Gaps = 16/269 (5%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP-------DEAAMLRQSRRIS 81 +++P +PGVY++ + +Y+GK+ N+R R+ S+ + +++ S Sbjct: 29 SEIPAKPGVYVYRDRFGKV-IYVGKAANLRRRMSSYFQPSRVVRADAKLRSLINSISDWS 87 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEVDFSRAP 140 + E AL+LE+RLIK+ P +N +R +++ L+++ ++ + + + Sbjct: 88 YEVVRTEDEALILESRLIKDFAPHYNVLMRDDKRYLLLKIDWHEKFPTLKLARLKKNDGA 147 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG F A L+ + L + C + +K C C G + E Sbjct: 148 QYFGPFPKGGALKMTLEFLLAHFGLRACRDSEPDEETRKRCLKRIVKDCCAPCTGAVTPE 207 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 E+ R+ Q++ L A+ +MT + Q + + + + Sbjct: 208 EYRERVEQAVAVLNGDIAELTAAI-----REKMTAAAMEQRFEKAAHLRDVLTNLEAVF- 261 Query: 261 PAGFDHDGYKILCKPLLSGNYEITELDPA 289 + + G + L A Sbjct: 262 -GKRNRIFERPELPGTAPGMAAVRALGEA 289 >UniRef50_B5Y9S9 Excinuclease ABC, C subunit n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9S9_COPPD Length = 595 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 111/288 (38%), Gaps = 26/288 (9%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTP---DEAAMLRQSR 78 LR + P PGVYLF+G S + +Y+GK+ ++ +R+ + R+ E ++ + Sbjct: 1 MTLRESIEQAPHSPGVYLFYGNSGQV-IYVGKASDLHNRLADYARSQPGQKEHLIMSNAS 59 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRV----DVVYAKEV 134 ++SWI A E +L LE LIK+ P +N L+ + L+++ + ++V K+ Sbjct: 60 KVSWIIVANERQSLELEETLIKKYAPPYNVLLKDGKGYSYLRIDLSQEYPAVEIVRIKQR 119 Query: 135 DFSRAPNLFGLFAN----------RRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRS 184 LFG F R +Q + + L+ R R C Sbjct: 120 KPKPGQLLFGPFVPLRVPDMPGKVRGDLKNLIQIAEEVFGIRSCKGPLK--RRMRPCVYY 177 Query: 185 ALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLW 244 + RC+G C GK S EE+ R++ ++ L+ + M + N+ Sbjct: 178 EIGRCSGPCIGKISPEEYKDRVQLFIKFLKGDTKEVENR-----LTKMMKEEAENLNFER 232 Query: 245 LGAVNSLEEATTLIRTPAGFDHD-GYKILCKPLLSGNYEITELDPAND 291 + L I + D ++ L + + Sbjct: 233 AAELRDLLYTVKRIGMQREANVDGSADLIAFALKEDQASGFVVSVRDG 280 >UniRef50_A7HJI0 UvrABC system protein C n=3 Tax=Thermotogaceae RepID=UVRC_FERNB Length = 563 Score = 209 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 89/229 (38%), Gaps = 12/229 (5%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR--TPDEAAMLRQSRRISWI 83 L +P + GVY+F +YIGK+ ++ R+ SH + ++ ++ + I Sbjct: 5 KILEKIPNKSGVYIFK--KGEEYIYIGKAKELKKRLTSHFKAKDGKSKLIVEEADDLQVI 62 Query: 84 CTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLF 143 E AL+LEA +I + +P +N L+ + ++++ + + + Sbjct: 63 LLDNEKEALILEANMIYKYKPKYNAMLKDTQVYPYIRISNDEIPYLEIVRNRKGE-GEFY 121 Query: 144 GLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHA 203 G F N Q + + K + L + C L C+G C +ES E++ Sbjct: 122 GPFTNVYFTRQLFEVLRKVYKFRTCKRDITKLK--KPCMDYHLGLCSGVCINEESPEDYK 179 Query: 204 LRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 ++ + L+ + LK M Q+ + ++ + Sbjct: 180 KKINEVKNVLKGKFSNVISFIKLK-----MEQHARLLDFENAAKYRDIL 223 >UniRef50_D2ML33 Excinuclease ABC, C subunit n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2ML33_9BACT Length = 583 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 100/260 (38%), Gaps = 19/260 (7%) Query: 45 DTMPLYIGKSVNIRSRVLSHLRTPDEA----AMLRQSRRISWICTAGEIGALLLEARLIK 100 P+YIGK+ N+R+RV+S+ + + ++R+ I ++ T GE AL +E LIK Sbjct: 5 GGTPVYIGKAKNLRARVMSYFQRGSDRGQIPYLVREVDSIDYVVTEGESEALFIENSLIK 64 Query: 101 EQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTI 159 +P +N RL+ ++ +L+L+ +R + FG FA+ + + + Sbjct: 65 RHKPKYNIRLKDDKTFSSLRLSVGERFPRLSRTRRIRDDGALYFGPFASGKFLKSTVNLV 124 Query: 160 ADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWP 219 L R C +K C+G C GK S E++ + Q+ LR Sbjct: 125 HRLFPLRDCTQSKFERHSTRPCLNYFMKLCSGPCAGKISEEDYGELVSQATSFLRGER-- 182 Query: 220 WQGAVALKEQHPEMTQYHIIQNWLWLGAVNSL-----EEATTLIRTPAGF-DHDGYKILC 273 ++ M + + E A T + F D D I+ Sbjct: 183 ---KKLVRMIREMMERASEDGRYENAAYYRDQLVSLKENAEIEKVTSSRFEDMD---IMG 236 Query: 274 KPLLSGNYEITELDPANDQR 293 S NYE T L Sbjct: 237 FYRDSENYEFTVLLSRGGSV 256 >UniRef50_Q2GJJ1 UvrABC system protein C n=6 Tax=Anaplasma RepID=UVRC_ANAPZ Length = 614 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 103/263 (39%), Gaps = 22/263 (8%) Query: 35 PGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAMLRQSRRISWICTAGEIG 90 PGVY G D + LY+GK+ +++ R+ S+L + + M++Q R+ T E Sbjct: 27 PGVYKMFGTEDRL-LYVGKAKDLKKRLSSYLSINRMSVNVYTMVKQIVRLEITVTENETE 85 Query: 91 ALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRA--PNLFGLFAN 148 ALLLEA+LIK +P +N +R ++ + ++ + + S L+G F + Sbjct: 86 ALLLEAKLIKSLKPKYNIIMRDDKFYPYILFSKHKYPRIVLHREKRSEGRYTGLYGPFLS 145 Query: 149 RRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQ 208 + TI L +R R C +K C+ C K + E++A ++ Sbjct: 146 SVMTRHIIATIKKAFLLRSCP-DNFFATRARPCIEYEIKNCSAPCMQKITEEDYAKAVQM 204 Query: 209 SLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPAGFDHDG 268 + + L E M ++ Q++ A ++ GF Sbjct: 205 AHKALTGQ-----SKEIQCELFEMMCRFSNNQDYESAIVCRDRLHALKSMKECMGF---- 255 Query: 269 YKILCKPLLSGNYEITELDPAND 291 + + G+ + + D Sbjct: 256 -----QTGIHGDVDFIAVYKRQD 273 >UniRef50_Q83NI9 UvrABC system protein C n=2 Tax=Tropheryma whipplei RepID=UVRC_TROW8 Length = 607 Score = 206 bits (525), Expect = 5e-52, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 101/245 (41%), Gaps = 14/245 (5%) Query: 30 DLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA----MLRQSRRISWICT 85 ++P +PGVY F E+ + LY+GK+ N+R+R+ S+ ML S+++ W C Sbjct: 8 EIPCKPGVYRFEDENGRI-LYVGKAKNLRNRLGSYFTNARRGRRISYMLSISKKVGWTCV 66 Query: 86 AGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAPNLFG 144 A +I AL LE IKE P N +L+ ++ L + ++V + A + FG Sbjct: 67 ADDIEALRLEYSWIKEFAPPCNVKLKDDKAYPFLAVTIGEQVPRLLITRRKIQYATH-FG 125 Query: 145 LFANRRAALQALQTIADEQKLCYG--LLGLEPLSRGRACFRSALKRCAGACCGKESHEEH 202 + + + + ++ ++ G CF + +C G C K +H ++ Sbjct: 126 PYPKVFHLRETVSLLHKIFQIRTCSPTNYKRAIASGMPCFEGQINKCFGPCSLKTTHLQY 185 Query: 203 ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPA 262 R++ + L L+ +M + + + + +A + + + Sbjct: 186 QKRIKNLMAFLEGQSSSL-----LESLKKKMLKASKNKEYEEAAILRDKIQAAQTVLSRS 240 Query: 263 GFDHD 267 D Sbjct: 241 AVLLD 245 >UniRef50_B2URH7 Excinuclease ABC C subunit domain protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URH7_AKKM8 Length = 498 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 86/232 (37%), Gaps = 13/232 (5%) Query: 40 FHGESDTMPLYIGKSVNIRSRVLSHLR-------TPDEAAMLRQSRRISWICTAGEIGAL 92 +Y+GK+ ++ R+ ++ A++ + T + A Sbjct: 1 MKDARGN-TIYVGKAKDLHRRLGNYFSPTGATLSNHKTRALINAIASFDYFETRNDQEAF 59 Query: 93 LLEARLIKEQQPLFNKRLRRNRQLCALQLNE-KRVDVVYAKEVDFSRAPNLFGLFANRRA 151 LLE++LIK+ +P +N +++ +++ L++ + +++ V FG F + +A Sbjct: 60 LLESKLIKQYRPHYNIQMKDDKRYPLLKIPKGEKLPRFQLARVRKDDGARYFGPFVHSQA 119 Query: 152 ALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLE 211 + + +L + R C ++ C+ C G+ S ++ Q++ Sbjct: 120 LYATQEWLNRHFRLRTCKTKNPGIHDFRHCHADVIRNCSAPCIGRISINDYNRNFDQAVR 179 Query: 212 RLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRTPAG 263 L L E EM + ++ + + + + PA Sbjct: 180 LLEGTGR----KSTLDELTGEMMEAADKLDFERAAYLRDIRDNLVKVLEPAR 227 >UniRef50_C0N1K0 Exonuclease family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N1K0_9GAMM Length = 488 Score = 206 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 100/300 (33%), Positives = 149/300 (49%), Gaps = 26/300 (8%) Query: 20 YPEHL-RSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAAML 74 P H+ +S ++ LP G+Y F+ + + LYIGKSVNIR RVLSH + E + Sbjct: 191 IPSHVSQSDIDLLPEAAGIYRFYDANGGL-LYIGKSVNIRERVLSHFGQDHQHGKELDIS 249 Query: 75 RQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAK-- 132 +Q I++ T + GA LLE IK P FN+R + ++L L L + + K Sbjct: 250 QQLHHITFQQTPSDFGAQLLENTEIKHYSPRFNRRQTKTKKLYQLTLTTDKQGYHHLKTE 309 Query: 133 ---EVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRC 189 + + +GLF +R+ A + + + D +LC L G+E RG ACF LK+C Sbjct: 310 VADMTEINTITQRYGLFRSRKQAEKKMLELIDTHRLCQKLCGIEKSQRG-ACFGYQLKKC 368 Query: 190 AGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQ----HPEMTQYHIIQNWLWL 245 GACCG ES E + LRL+ +L +L+ WPW G + ++E + +H+I W +L Sbjct: 369 RGACCGDESAETYNLRLQLALAQLKNQQWPWSGPIVVEEHPVHDDWDDVIFHLIDQWCYL 428 Query: 246 GAVNSLEEATTLIRT----PAGFDHDGYKILCKPLLS------GNYEITELDPANDQRAS 295 G V EE + P FD D YKIL + LL+ + I + + AS Sbjct: 429 GQVIDNEECLATLSRRQHTPVSFDLDAYKILLRFLLTPSPQKHHHLRIKPISIEQLEHAS 488 >UniRef50_A1SLE5 DNA polymerase III, epsilon subunit n=5 Tax=Actinomycetales RepID=A1SLE5_NOCSJ Length = 601 Score = 206 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 100/256 (39%), Gaps = 13/256 (5%) Query: 6 TSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL 65 T L+ ++ + R LP PGVYLF E + LY+G S ++R+RV S+ Sbjct: 203 TLEELQTFSSRVSSAQRRKRHLAEGLPHAPGVYLFRDEQAQV-LYVGTSRDLRTRVRSYF 261 Query: 66 RTPDEA----AMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL 121 + M+ + + I A + A + E RLI E +P +N+R R ++ ++L Sbjct: 262 TASETRSRMGEMVGIATVVDAIECATALEAEVRELRLIAEHKPKYNRRSRNPSKVHFIKL 321 Query: 122 NEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLE--PLSRGR 179 + + + G F++++ A + L + + + L P + GR Sbjct: 322 TREPWPRLSLVRRVLDDDADYLGPFSSKKTAEKCLAALHETFPVRQCTDRLPGDPAAAGR 381 Query: 180 -ACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHI 238 C + + RC C G H +A + Q + L ++ + +M Sbjct: 382 APCVLAEMGRCLAPCDGSVDHATYAAVVHQLRDTLLRRPDEV-----VETINAKMGALAA 436 Query: 239 IQNWLWLGAVNSLEEA 254 + + G A Sbjct: 437 DERFEEAGVHRDRLAA 452 >UniRef50_A8FMV1 UvrABC system protein C n=22 Tax=Campylobacter RepID=UVRC_CAMJ8 Length = 600 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 104/280 (37%), Gaps = 30/280 (10%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----------RTPDE 70 E+L + L LP GVY + + + LY+GK+ N+++RV S+ + Sbjct: 4 ENLENELKTLPNSAGVYQYFNQEGKL-LYVGKAKNLKNRVKSYFAFTPNLHANPRNSLRI 62 Query: 71 AAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVV 129 M+ ++ + +I T E AL+LE IK+ P +N LR ++ + ++ E+ Sbjct: 63 QKMIEETVHLEFITTNSEADALILENSFIKQLHPKYNILLRDDKTYPYIYVDFEEEFPRF 122 Query: 130 YAKEV-DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKR 188 FG F + A + L + L C + R Sbjct: 123 EITRKLVKKSKIKYFGPFF--KGARELLDALYLYYPLKQKASCKS------PCIFYQISR 174 Query: 189 CAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAV 248 C C + S E++ L +++ L ++ +K +M +N+ V Sbjct: 175 CLAPCDKRISREKYLEILDEAMHAL------LNPSILIKNLEKQMLVLAQNENYEEAAKV 228 Query: 249 NSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDP 288 + T+ + D K+ + + +E + L Sbjct: 229 RD--QIVTIKDLEVKVEIDIAKLEDFEVFALAFENSMLST 266 >UniRef50_Q7VK73 UvrABC system protein C n=2 Tax=Helicobacter RepID=UVRC_HELHP Length = 621 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 63/282 (22%), Positives = 112/282 (39%), Gaps = 36/282 (12%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR------------TPDE 70 +L L DLPT+ G+Y F DT+ LY+GK+ N+++R+ S+L +P Sbjct: 10 NLLVHLADLPTQSGIYQFFDNEDTL-LYVGKAKNLKNRIKSYLSIENKHIVPKNNLSPRI 68 Query: 71 AAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK-RVDVV 129 A M+ Q RI + T E AL+LE LIK +P +N LR ++ + +++ Sbjct: 69 ALMVSQITRIHTLLTNNEQDALILENSLIKSLKPKYNILLRDDKTYPYIYIDKSLPYPRF 128 Query: 130 YAKEVD-FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKR 188 S FG F + A + L ++ D L + +AC + + Sbjct: 129 ELTRQVLKSNQIQYFGPFVSG--ARELLDSLYDNLPLVQKKSC---VKGKKACIFHQIHK 183 Query: 189 CAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAV 248 C C K S + +A + Q + + LK +M + + Sbjct: 184 CPAPCENKVSIQTYAQTIAQGIALIE------DKKALLKILESKMHTLSHNLQFEEAAIM 237 Query: 249 NSLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPAN 290 + T ++ + D ++SG+Y++ L + Sbjct: 238 RDRIQKITQMKNQSIID----------MMSGDYDVFVLQEQD 269 >UniRef50_P47448 UvrABC system protein C n=2 Tax=Mycoplasma RepID=UVRC_MYCGE Length = 597 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 97/254 (38%), Gaps = 12/254 (4%) Query: 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAAMLRQSRR 79 +L+ L P +PG YL+ + + LY+GK+ NI +RV + + Q Sbjct: 4 NLKQKLKTAPKKPGCYLWKDSNGKV-LYVGKASNIFNRVHQYFQKNNPYKTQLLSSQISD 62 Query: 80 ISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRA 139 + + E AL LEA+LI + QP FN L++N + + + + + Sbjct: 63 VDFFILKDENDALNLEAKLINQYQPRFNLVLKQNNGYLYFYITKAKKPTLELARKYQIKT 122 Query: 140 PNLFGLFANRR-AALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKES 198 FG FA+ + + + L P + CF + C G C ++ Sbjct: 123 TKCFGPFASSKFKLREIHDLLLKLFPLRKCA----PHQKNHPCFYFQMGLCMGQCMQTDT 178 Query: 199 HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAV---NSLEEAT 255 E++ + + A +++ + ++ Q +L L + T Sbjct: 179 KEKYQQVISNIEQFFNDPSVVINYLKAAEKKASDNQEFEKAQQFLTLQKAVLELTKTHHT 238 Query: 256 TLIRTPAGFDHDGY 269 T+I+ + D GY Sbjct: 239 TIIKQKSSHDFIGY 252 >UniRef50_Q2L1Q9 Excinuclease (Fragment) n=1 Tax=Bordetella avium 197N RepID=Q2L1Q9_BORA1 Length = 301 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 113/278 (40%), Positives = 162/278 (58%), Gaps = 8/278 (2%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRIS 81 + +R+ LP GVYL+ GE+ T+PLYIGKSV++R R LSHLRTP EAAM+RQ RR+ Sbjct: 11 QTVRALARTLPRSTGVYLYFGEA-TLPLYIGKSVDMRGRFLSHLRTPAEAAMMRQVRRVD 69 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-----NEKRVDVVYAKEVDF 136 I TAGE+GALLLEA LIK++ PLFN+RLRR R+L L+L + + Sbjct: 70 CIETAGELGALLLEASLIKQRMPLFNQRLRRTRRLHVLRLASLACGGLQPRIEGLTGTPL 129 Query: 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 FGLF +R AA++ L+++A +LC GLLG+E + R CF L RC G C G+ Sbjct: 130 ECEAARFGLFKSRSAAVEHLRSLAQAHELCLGLLGIERMG-SRGCFGLQLGRCRGVCVGR 188 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATT 256 E + H RL+++L+ LRV WP+ G + + E+ + Q H + +W +L S + Sbjct: 189 EPRQTHDQRLQEALDALRVHAWPYAGPIRIVERAGDWVQSHEVHDWRYLHTDCSRQGRIG 248 Query: 257 LIRTPAGFDHDGYKILCKPLLSGNYEITELDPANDQRA 294 FD D Y++L +P+L +I ++ A Sbjct: 249 A-GIQQSFDADIYRLLVRPILEQQADIVQVAGKARSPA 285 >UniRef50_A5KSN0 Excinuclease ABC, C subunit domain protein n=2 Tax=candidate division TM7 RepID=A5KSN0_9BACT Length = 440 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 92/255 (36%), Gaps = 18/255 (7%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQSR 78 L + L LP PGVY + +Y+GK+ +++RV + A++ + Sbjct: 8 LEAKLKTLPRSPGVYFHKDARGKI-IYVGKAAILKNRVRQYFQKNRPHDIKTEALVAEIA 66 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS 137 W EI AL LE+ +IK +P +N L ++ +++N + V Sbjct: 67 DTDWTTVETEIDALFLESEMIKRYKPRYNVLLCDDKSQLFVRINMQDVYPYVSFTRWPQD 126 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKE 197 + +G + N A +AL+ + R C + L C G K Sbjct: 127 DSAEYYGPYYNGWAVKKALRYLRRAFP-----YSTHETMPKRVCLQYHLGLCPGVEEQKI 181 Query: 198 SHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTL 257 S ++ + LR+ + L+ +++ EM +++ + Sbjct: 182 SSADYKVTLRKLIRYLKGER-----KALVRDIEQEMKTAAARKDYELAAKKRNQLRDLKE 236 Query: 258 IRTPAGF-DHDGYKI 271 + F D + I Sbjct: 237 LGRQVIFSDREFLDI 251 >UniRef50_Q8EWS6 UvrABC system protein C n=1 Tax=Mycoplasma penetrans RepID=UVRC_MYCPE Length = 589 Score = 202 bits (515), Expect = 8e-51, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 96/259 (37%), Gaps = 12/259 (4%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---RTPDEAAMLRQSR 78 E ++ L +P +PG YL+ ++ + +Y+GK+V++ +R+ + R + + Sbjct: 3 EQIKDKLKKIPHKPGCYLWKDKNG-IVIYVGKAVDLANRIKQYFLKDRDLKTKKLANEIC 61 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYA-KEVDFS 137 + ++ E +LLLE LI + +P +N LR + + + ++ + + Sbjct: 62 DVDYVVVNNENESLLLENNLIAKYKPKYNMLLRESNAFPYILVTKEEHPRILYSHDSTKK 121 Query: 138 RAPNLFGLFANRR-AALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGK 196 +G FAN + I L + C + +C G C K Sbjct: 122 IKGTYYGPFANSNIKKYELYNFINRIFPLRKCN-----KLPNKKCIYYDIGQCLGPCIKK 176 Query: 197 ESHEEHALRLRQSLERLRVVCWPWQGAVALKE-QHPEMTQYHIIQNWLWLGAVNSLEEAT 255 + +++ L++ + + KE Q E + Q +L L + Sbjct: 177 VTRQDYEPYLKEINDFFSGKSKSIDEQLEKKEIQAAEKLMFEDSQKYLELRKNLKMFSER 236 Query: 256 TLIRTPAGFDHDGYKILCK 274 I D D CK Sbjct: 237 QDIIFSQKNDEDIIGFYCK 255 >UniRef50_A8F4P7 UvrABC system protein C n=6 Tax=Thermotogaceae RepID=UVRC_THELT Length = 558 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 95/256 (37%), Gaps = 16/256 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR------TPDEAAMLR 75 L P PGVY+F+G++ +Y+GK+ +R+R+LS+ + A++ Sbjct: 1 MDLLHKAKLAPLLPGVYIFYGKN-KEYIYVGKAKRLRNRLLSYFNRSNGKYSKKIQAIVN 59 Query: 76 QSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVD 135 ++ + +I + E ALLLEA LI +P +N L+ +++ ++ V + Sbjct: 60 EAEELDYIVVSNEREALLLEANLIFNHKPKYNVMLKDAEFYPYIEITKELFPAVQIVRIR 119 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 + FG + + + + + + + + C + RCA C G Sbjct: 120 ST-GGEYFGPYTDVKFVKDLIDCLQQVYQFRTCRRDMS--KSTKPCMEFYMHRCAAPCTG 176 Query: 196 KESHEEH-ALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 + + ++ L L +M ++ + ++ L Sbjct: 177 DLEPDSYINSSIQPLRRVLNGDISE-----TLDLIEEKMKKHAKMMDFENAAKYRDLLVK 231 Query: 255 TTLIRTPAGFDHDGYK 270 + G + ++ Sbjct: 232 FENVMQRQGVVLEQWR 247 >UniRef50_B3R8V7 DNA polymerase III, epsilon subunit + GIY-YIG endonuclease (Modular protein) n=2 Tax=Burkholderiales RepID=B3R8V7_CUPTR Length = 532 Score = 202 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 113/282 (40%), Positives = 158/282 (56%), Gaps = 9/282 (3%) Query: 18 YEYPEHLRS-FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL----RTPDEAA 72 P L L D+P PGVY+F+G+ D +PLY+GKSV++R R+ +H R + Sbjct: 210 ASLPAGLEETALEDVPASPGVYIFYGDQD-VPLYVGKSVHLRQRIGAHFSGDYRYGKDMR 268 Query: 73 MLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK-RVDVVYA 131 + R RR+ W T GE GALLLEA+L+K QP+ N+ LRRN +L A +L ++ V + + Sbjct: 269 LARLVRRVEWRETGGETGALLLEAQLVKAMQPVHNQMLRRNTRLYAWELPQQLPVPRLRS 328 Query: 132 KE-VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL-SRGRACFRSALKRC 189 DF R +LFG+F +R AA L+ +A+E LC L LE RG CF + RC Sbjct: 329 DRDTDFCRHRDLFGVFGSRGAAEARLRALAEEHGLCMATLSLEKTTRRGSPCFARQVHRC 388 Query: 190 AGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVN 249 AGAC G ES EH RL +L + ++ WP+ GAVA +EQH +H++ W +LG + Sbjct: 389 AGACVGAESPREHRARLAAALGPIALLPWPFDGAVAWREQHGARACWHVVDEWCYLGCAD 448 Query: 250 SLEEATTLIRTPAGFDHDGYKILCKPLLSGNYEITELDPAND 291 +LE+A L PA FD D Y+IL + L D Sbjct: 449 TLEDAGALAAAPAHFDLDTYQILAPRRDQWMPDAVPLSVRRD 490 >UniRef50_A6DMD6 Excinuclease ABC subunit C n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMD6_9BACT Length = 486 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 86/241 (35%), Gaps = 14/241 (5%) Query: 29 NDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-------TPDEAAMLRQSRRIS 81 + + PGVY+F + +Y+GK+ ++R R+ ++ + P +++ Sbjct: 10 RKISSDPGVYVFRDRFAKV-IYVGKAKSLRKRLATYFQASRLATADPKLRSLINSIAFYE 68 Query: 82 WICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRAP 140 E ALLLE+R IKE P +N +R ++ +++ + + V Sbjct: 69 TYEVKSESEALLLESRFIKEYSPHYNILMRDDKNFYLVKVTINEPYPRILLTRVRKDDGA 128 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG F A ++ + KL + LS + C L+ C+ C + E Sbjct: 129 AYFGPFPCSSAIRSTVEFLTRYFKLRTCTSRIPDLSDRKHCKEQILRNCSAPCDQSVTQE 188 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT 260 ++ + ++ L A + E + M Y + + Sbjct: 189 QYRESVGDMIKVLEGQI-----ADIVDELNEAMQNYVEKLQFEKAATYRDIITNLKSALK 243 Query: 261 P 261 Sbjct: 244 Q 244 >UniRef50_Q2S2L6 Exonuclease family n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2L6_SALRD Length = 538 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 95/260 (36%), Gaps = 19/260 (7%) Query: 15 AAIYEYPEHLR----SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---- 66 + E P H+ L D+P PGVY+ S T PLYIGK+ + R+ SH Sbjct: 167 QTVREVPGHIESIRDEVLPDVPDEPGVYVMKNRSGT-PLYIGKAKRLPDRLRSHFTAVES 225 Query: 67 -TPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL-NEK 124 + ML++ R + W TA E+ A+LLE+R IK ++P +N+ RR ++L Sbjct: 226 SGARKRKMLQKVRSVDWTTTATELEAILLESRRIKAEKPRYNRAQRRYYNRPFIRLDTAH 285 Query: 125 RVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRS 184 V + +G N A + + +L E L G+ C + Sbjct: 286 EYPTVSWTRRLEADGAEYYGPVRNTEQAEMVVDVVGRFFQLREC--DDERLHLGQRCLYA 343 Query: 185 ALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLW 244 + RC C K E +A + + L G M + N+ Sbjct: 344 DMDRCTVPCETK-DAEAYATVVERVRAFLTGQDQSVLGT-----MRDRMQRASDNLNFEK 397 Query: 245 LGAVNSLEEATTLIRTPAGF 264 + E I Sbjct: 398 AAELRDTLEQLERILEKQRV 417 >UniRef50_C3XEM6 Excinuclease ABC subunit C n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XEM6_9HELI Length = 563 Score = 199 bits (506), Expect = 9e-50, Method: Composition-based stats. Identities = 57/293 (19%), Positives = 107/293 (36%), Gaps = 34/293 (11%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL---------RTPDEAA 72 L+S L +P PG+Y ++ + D + LY+GK+ N++ RV S+ + Sbjct: 3 NTLQSQLQKIPNEPGIYQYYDKDDKL-LYVGKAKNLKKRVKSYFTKECSPNPKNSLRIQH 61 Query: 73 MLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL--NEKRVDVVY 130 M+ Q I I A E AL+LE IK Q P +N LR ++ + + N+ Sbjct: 62 MVAQIAHIHTIIVANEHEALILENSFIKSQNPKYNILLRDDKTYPYITINLNDCYPRFSI 121 Query: 131 AKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCA 190 + + + FG + + A + LQ++ + + L + C + +C Sbjct: 122 TRRIIKHKDTLYFGPYP--KGAKEILQSLYELFPIVQQASCL---KGKKPCLYYQIGKCL 176 Query: 191 GACCGKES--HEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAV 248 G C K+S E+ ++Q++ ++ K M + + + Sbjct: 177 GVCSIKDSNTKAEYDSYIQQAIILMKNTSK------MQKVLESSMLSFAEKELFEQAKIC 230 Query: 249 NSLEEATTLIRTPAGFDH------DGYKILCKPLLSGNYEITELDPANDQRAS 295 + D D Y L N + +L + + S Sbjct: 231 KDCIDVLQETTKFCAVDMKKLYNADVY---SFVLQGSNAILFKLFVRDGKVVS 280 >UniRef50_D1VLC1 DNA polymerase III, epsilon subunit n=1 Tax=Frankia sp. EuI1c RepID=D1VLC1_9ACTO Length = 615 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 107/269 (39%), Gaps = 16/269 (5%) Query: 2 VRRLTSPRLEFE---AAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIR 58 + L LE +A + R +DLPT PGVY+F + + LY+GKS ++R Sbjct: 217 LGNLGVTTLEDVHAYSARVSPAQRRKRVLADDLPTGPGVYIFRDATGRV-LYVGKSASVR 275 Query: 59 SRVLSHLRTPDEA----AMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNR 114 +RV ++ + M+ + R+ I A + A + E RLI E +P +N+R R Sbjct: 276 ARVRTYFTASETRSRMAEMVAAAERVDAIACAHALEAEVRELRLIAEHKPPYNRRSRFPE 335 Query: 115 QLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEP 174 ++ L+L ++ + + A G F A A + D L L P Sbjct: 336 RVVFLRLTDEPFPRLSKVRQVRADAGTYLGPFGGVGGAELAGDGLLDAVALRRCGGRLSP 395 Query: 175 LSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVV----CWPWQGAVALKEQH 230 AC + L +C C G++S E + + + E + + +A + Sbjct: 396 RVTSPACALADLGKCGAPCDGRQSVESYGDVVAAAREAMTGDPALVVAAARARIAGLAEQ 455 Query: 231 PEMTQYHIIQN----WLWLGAVNSLEEAT 255 + ++++ ++ A A Sbjct: 456 TRFEEAALVRDRMVAFVRAAARQQRLTAL 484 >UniRef50_C5RNQ3 Excinuclease ABC C subunit domain protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RNQ3_CLOCL Length = 364 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 54/245 (22%), Positives = 100/245 (40%), Gaps = 19/245 (7%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEA-----AMLRQ 76 +L+ + LP+ PGVYL + + +YIGKS N+++RV S+ + +++ Sbjct: 1 MNLKEKIKGLPSVPGVYLMKDSLENI-IYIGKSKNLKNRVSSYFQNSKNHSSKVIRLVQN 59 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ--LNEKRVDVVYAKEV 134 + +I T E A +LE +LIKE +P +N+ ++ +Q L + +D+ E Sbjct: 60 LKDFDYIITDTEFEAFILECKLIKEIKPPYNRLMKSPMSYSYIQVALGDNCLDISLKSEA 119 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKL-CYGLLGLEPLSRGRACFRSALKRCAGAC 193 FG + +R + + I + K+ C +G AC +LK C G C Sbjct: 120 VKDDNCIYFGPYTSRNIVERGILGIKNHLKIACTNNS-----RKGSACINYSLKLCMGMC 174 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 K S ++ + L+ L ++E + M ++ Sbjct: 175 MNKVSQNQYIEIYNKILQLLNG-----SDKSIIEEMNLVMNNAAESFDFETAAKYRDYIS 229 Query: 254 ATTLI 258 + I Sbjct: 230 SINYI 234 >UniRef50_A6M201 Excinuclease ABC, C subunit domain protein n=5 Tax=Clostridium RepID=A6M201_CLOB8 Length = 366 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 101/244 (41%), Gaps = 17/244 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQ 76 L+ + LP+ PGVYL + + +Y+GKS N++SRV S+ +P +++ Sbjct: 3 MDLKEKVKKLPSSPGVYLMKDSLNNV-IYVGKSKNLKSRVGSYFINSKSHSPKILKLVQN 61 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQL--NEKRVDVVYAKEV 134 + + T E A LLE LIK+ +P +N+ ++ + +++ NEK ++ + E Sbjct: 62 LKDFEYKITDTEFEAFLLECELIKKIKPAYNRLMKNPKSYSYIKIVLNEKYPNIEISHES 121 Query: 135 DFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACC 194 + + FG ++ + A + L I + C + + +CF +L C G C Sbjct: 122 NETDGNIYFGPYSRKNIAEKGLYGIKEY---CKIQCSI-NQRKTSSCFNYSLGLCIGMCL 177 Query: 195 GKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 EE+ L + + L + L+E M ++ + Sbjct: 178 DTTPREEYLNILNKIINLLNGN-----DKIILQEMEHIMNSASEKFDFETAAKYRDYISS 232 Query: 255 TTLI 258 + Sbjct: 233 VNYL 236 >UniRef50_B1AJ20 UvrABC system protein C n=15 Tax=Ureaplasma RepID=UVRC_UREP2 Length = 584 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 86/252 (34%), Gaps = 16/252 (6%) Query: 24 LRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSRRI 80 L++ L +P +PG YL+ + + + +YIGK+ ++ +R S+ + ++ + Sbjct: 5 LKNKLKLIPHKPGCYLWKDQFNQI-IYIGKAKDLYNRTHSYFNGCKDNKTSKLVNNINDL 63 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 +I AL+LE LIK P +N L+ + + ++ + Sbjct: 64 EYIVVNNVNEALILENNLIKTHLPKYNILLKDGSNYPYIMITNEQYPRLKYVRTYDKNKG 123 Query: 141 NLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHE 200 FG A+ Q + + C L +C + Sbjct: 124 IYFGPLADSTNKYQLFNLLNSIFPFNKCN-----HQPYKKCIYYDLHQC----INQVQQS 174 Query: 201 EHALRLRQSLERLRVVCWPWQGAVALKEQHP-EMTQYHIIQNW-LWLGAVNSLEEA-TTL 257 + + + E + + KEQH + Q + A+ S+ + Sbjct: 175 TYQEAISEVKEIFKGNLDHILMILQTKEQHAVTKLDFENAQKYAEQQKALTSIINSGLVQ 234 Query: 258 IRTPAGFDHDGY 269 + FD G+ Sbjct: 235 LDNNESFDIIGF 246 >UniRef50_B2KBS4 Excinuclease ABC C subunit domain protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBS4_ELUMP Length = 437 Score = 197 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 86/247 (34%), Gaps = 21/247 (8%) Query: 28 LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRTPDEAA-------MLRQSRRI 80 N LP PGVY+ + LYIGK+ N+ +RV + + + +L +I Sbjct: 5 FNILPKSPGVYIMRSGLGEV-LYIGKAKNLAARVRQYFLESNLHSRGWLLPSLLPLVAKI 63 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAP 140 +I A E AL+LE+RLIK+ +P FN + ++ ++++++ Sbjct: 64 DYIVAASERDALVLESRLIKKYKPFFNTDGKDDKSYPYIKISDEDFPRGLLTRNKKG-PG 122 Query: 141 NLFGLFANRRAALQALQTI--ADEQKLCYGLLGLE-----PLSRGRACFRSALKRCAGAC 193 +G N A L+ + + L + R C +C C Sbjct: 123 EYYGPHPNAFAIKSLLRFLWTSGFAPLRPCKWNFSLSKPLDERKIRTCVYFHTGQCPAPC 182 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 GK S++++ +++ + + M ++ Sbjct: 183 AGKISYKDYQKIVQRFRDFAEGNFGKMK-----HGLAKAMKMASKNMDYESAARYRDFLN 237 Query: 254 ATTLIRT 260 + Sbjct: 238 TLERMSE 244 >UniRef50_B3QSB2 DNA polymerase III, epsilon subunit n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QSB2_CHLT3 Length = 578 Score = 196 bits (499), Expect = 6e-49, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 93/263 (35%), Gaps = 15/263 (5%) Query: 9 RLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL--- 65 + + + + LN PT+ GVYL D + LYIGKS N++SRV S+ Sbjct: 206 AIRNFKREPRHFSKIRNTVLNKFPTKSGVYLMKSAKDEV-LYIGKSKNLKSRVSSYFNQN 264 Query: 66 --RTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNE 123 R+ + R+I + T E+ ALLLE++LIK+ +P FN L+R R L +E Sbjct: 265 IDRSEKVVELTHHVRKIDYTLTGSELEALLLESKLIKQYKPRFNTLLKRYRSYPFLTFSE 324 Query: 124 KRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFR 183 + FG F + ++ + K+ SR R C Sbjct: 325 HEFPKLEIALDVEDGDKEYFGPFPSLELLQHVVEILERYFKVRKCSD--HDFSRARFCIY 382 Query: 184 SALKRCAGACCG-KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNW 242 L RC C K E + L Q L + EM + Sbjct: 383 FDLDRCFAPCKHPKHYKEAYIKELDQIRAFLSGKNPEIINVMI-----REMKALASENLF 437 Query: 243 LWLGAVNS-LEEATTLIRTPAGF 264 + + + + Sbjct: 438 EEAADLKQKIHSLQKVFFRQSDI 460 >UniRef50_C1YUT4 Exonuclease, DNA polymerase III, epsilon subunit family n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YUT4_NOCDA Length = 595 Score = 196 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 85/272 (31%), Gaps = 32/272 (11%) Query: 9 RLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT- 67 L + R DLP PGVY+F LY+GKS N+R RV ++ Sbjct: 204 ELRAVTKPPTKAQRSRRHLAEDLPEEPGVYVFTDARGE-SLYVGKSKNLRRRVRTYFTAA 262 Query: 68 ---PDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEK 124 M ++ I + E+ A + E R+I E++P +N+R R + ++L Sbjct: 263 ESRQRIREMAGLVAGVTPIVCSSELEASVRELRIIAERKPPYNRRSRNPERASWVRLTAD 322 Query: 125 RVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPL--------- 175 + G +A+ R A +A + + L P Sbjct: 323 AFPRLSVVRAVSGDGAAHIGPYASPREAERAREALLHVFPLRQCAHTFRPPKAVAGGSGG 382 Query: 176 -------------SRGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQG 222 C + L RC C G ES E+A+ + + Sbjct: 383 GTRVAPQVVTSGARWTGPCVVAQLGRCGAPCDGSESEAEYAVHAEAARVAMTGDPAAVVD 442 Query: 223 AVALKEQHPEMTQYHIIQNWLWLGAVNSLEEA 254 A + + + + A Sbjct: 443 AY-----TARIGELAADLRYEEAAHLRDRLTA 469 >UniRef50_C6NVW4 DNA polymerase III epsilon subunit n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVW4_9GAMM Length = 475 Score = 196 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 103/264 (39%), Positives = 137/264 (51%), Gaps = 8/264 (3%) Query: 19 EYPEHLRSF-LNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLRT----PDEAAM 73 P L + L+ LP RPGVYL + E+D++ LY+GKS+ +R RV H E + Sbjct: 187 ALPGSLDAQTLDALPDRPGVYLCYDEADSL-LYVGKSIRLRERVWDHFYAATSQQREMRL 245 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDVVYAKE 133 ++Q RR+ WI T E+ ALLLEARLIKE+QP+ N+RLRR L + Sbjct: 246 VQQIRRLEWIETPTELSALLLEARLIKERQPILNRRLRRRENLFTIAWEGIERGSPRIVP 305 Query: 134 VDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGAC 193 + L+G FAN A Q+L+ +A LC LGLE + G CF LK+C GAC Sbjct: 306 LRDCDGGELYGSFANAYRARQSLRRLARRHGLCLKALGLEKPTSG-PCFAHQLKQCRGAC 364 Query: 194 CGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 CG ES H LRL +L LR+ WPW G + L E+ YH++ W+ G + Sbjct: 365 CGAESRLLHDLRLSAALRHLRIEHWPWDGPMVLVEEGGGQRLYHLLWQWIHCGYRADPAD 424 Query: 254 ATTL-IRTPAGFDHDGYKILCKPL 276 TL R FD D Y+I L Sbjct: 425 LATLWERREGEFDMDIYRICFNAL 448 >UniRef50_Q7NKN5 Excinuclease ABC subunit C n=1 Tax=Gloeobacter violaceus RepID=Q7NKN5_GLOVI Length = 370 Score = 196 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 103/260 (39%), Gaps = 13/260 (5%) Query: 26 SFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR-----TPDEAAMLRQSRRI 80 L DLP PGVY F + LYIGKSV++R+RV S+LR + + +++ + Sbjct: 10 DRLEDLPDAPGVYRFVDCDGRL-LYIGKSVHLRTRVRSYLRRDGGHSRQTERLKFEAQAV 68 Query: 81 SWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFSRA 139 +CT E+ ALLLE RLI+E P FN+ +R RQ L+L+ ++ ++ V Sbjct: 69 EVLCTGSELAALLLEGRLIREYLPPFNQAQKRYRQYPFLRLSVQEDYPRLHLTRVLAGDG 128 Query: 140 PNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESH 199 +G ++ R ++ L C L +C G C Sbjct: 129 AEYYGPYSQARFVSWMADLLSASLGLRTCRDFSAIYHG---CLLDQLGKCLGPCRTGALV 185 Query: 200 EEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIR 259 ++ R+ + LR G+ + + +M +++ +A Sbjct: 186 AQYRERVERLRALLRGEDT---GSGIIVDFERQMLNAAQREDFEQAARWRDRRQALANFV 242 Query: 260 TPAGFDHDGYKILCKPLLSG 279 T G + + + G Sbjct: 243 THQGHLRERVSLDAVAVYPG 262 >UniRef50_B1H0C4 Excinuclease ABC subunit C n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H0C4_UNCTG Length = 432 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 98/268 (36%), Gaps = 15/268 (5%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR---TPDEAAMLRQSR 78 +H L ++P PGVY+ ++ +YIGK+ ++++RV S+ A+++ R Sbjct: 3 DHKNKKLENIPKLPGVYIMRDGVGSI-IYIGKAKSLKNRVSSYFNADINSKAASIITAMR 61 Query: 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVDFS 137 +I +I E AL++E +LI + QP FN + ++ ++ + ++ + Sbjct: 62 KIDYILCTSEREALIIERQLINKVQPYFNSMWKDDKSYPYIKFSIDEDFPRLALTRKKLK 121 Query: 138 RAPNLFGLFANRRAALQALQTIADEQKLCYGLLG-----LEPLSRGRACFRSALKRCAGA 192 FG + + ++ + K+ + L + ++C + C G Sbjct: 122 DGALYFGPYPQVFYIKKFVRWLVKLFKIRPCKMDLSEESLPEEKKVKSCLYYHTEMCTGP 181 Query: 193 CCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLE 252 C GK +++ +++ L + + +M + + Sbjct: 182 CLGKIMSKDYKKKIKDIELFLNGKFKKLED-----DWKTQMFDLSENMRYEEAKEIRDRL 236 Query: 253 EATTLIRTPAGFDHDGYKILCKPLLSGN 280 A + + + N Sbjct: 237 YALQNMSERVIISEITQDEINNSVKRAN 264 >UniRef50_A7GIE5 GIY-YIG domain protein n=10 Tax=Clostridium RepID=A7GIE5_CLOBL Length = 365 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 94/238 (39%), Gaps = 16/238 (6%) Query: 22 EHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHL-----RTPDEAAMLRQ 76 +L+ LP PG+Y+ + +Y+GKS N+R RV S+ T +++ Sbjct: 1 MNLKDKAKLLPQSPGIYIMRDSLSNI-IYVGKSKNLRKRVYSYFIKQNNATSKIEKLIKN 59 Query: 77 SRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLN-EKRVDVVYAKEVD 135 + +ICT E+ ALLLE IK +P +N+ ++ + + +Q+N + + ++ Sbjct: 60 IKDFQYICTDTELEALLLECTFIKCIKPQYNRLMKNHERYIYIQINIKDQYPIIKVASEI 119 Query: 136 FSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCG 195 +G F N L+ ++ + + L L+ S C A+ +C G C Sbjct: 120 KDDNYLYYGPFINYNRILKFVEGLNEILPLIKCNNYLKHKST---CINYAIGKCKGPCIE 176 Query: 196 KESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEE 253 S +++ + + + + + M +Y + + Sbjct: 177 NISSKQYKKYIDKVISFFQGE------KDLIILLEKYMREYCETLEFEKAKIFKDYID 228 >UniRef50_C4K928 DNA polymerase III, epsilon subunit n=1 Tax=Thauera sp. MZ1T RepID=C4K928_THASP Length = 502 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 122/308 (39%), Positives = 156/308 (50%), Gaps = 55/308 (17%) Query: 20 YPEHLR-SFLNDLPTRPGVYLFHGESD--------------------------------- 45 P HL + DLP PGVYLF+GE Sbjct: 191 LPPHLDPEQIADLPDTPGVYLFYGERGGESSQLGGNDEADAEAEADPLGPGRARTGARDR 250 Query: 46 -------TMPLYIGKSVNIRSRVLSHL----RTPDEAAMLRQSRRISWICTAGEIGALLL 94 +PLYIGKS +RSRVLSH + E ++ +Q RRI WI TAGEIGALL Sbjct: 251 KRHAPLQDLPLYIGKSTRLRSRVLSHFAADHSSDRELSLSQQVRRIEWIATAGEIGALLK 310 Query: 95 EARLIKEQQPLFNKRLRRNRQLCALQLNEK-----RVDVVYAKEVDFSRAPNLFGLFANR 149 EA L+K QP N++LRRNR+LC +L R+++V+A ++DF R +L+G F R Sbjct: 311 EAELVKRLQPTHNRQLRRNRELCTWRLATDIVGDWRLELVHAADLDFGRRDDLYGFFRTR 370 Query: 150 RAALQALQTIADEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQS 209 R A L+ +A + LC LLGLE +G CF LKRC GAC G ES + HALRL ++ Sbjct: 371 REATNRLRALARDHALCPPLLGLEKPPQGARCFDFQLKRCRGACHGGESPQAHALRLIEA 430 Query: 210 LERLRVVCWPWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEEATTLIRT-PAGFDHDG 268 L L+V W W G V L+E H++ W WLG L+ FDHD Sbjct: 431 LHALKVEHWTWPGPVGLREGEA----IHVVDGWRWLGTATDEAMLADLLEAGRPAFDHDI 486 Query: 269 YKILCKPL 276 YKIL K + Sbjct: 487 YKILVKAV 494 >UniRef50_Q1YU82 DNA polymerase III, epsilon subunit n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YU82_9GAMM Length = 528 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 85/312 (27%), Positives = 148/312 (47%), Gaps = 51/312 (16%) Query: 19 EYPEHLRS-FLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSHLR----TPDEAAM 73 P L++ + LP GVY F+ + + LY+GKS++IR+RV+SH P + + Sbjct: 203 ALPPLLKASDIKKLPASAGVYYFYDANGAL-LYVGKSIHIRNRVMSHFSQDHSNPKDLQI 261 Query: 74 LRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKRVDV----V 129 + I + T ++GA + E+ IK PL+N+RLR+ ++L + +E R + Sbjct: 262 NNKLAHIDFEKTPSDLGAQIRESNQIKALYPLYNRRLRKTKKLYQYRCDEDRNGYQRIAI 321 Query: 130 YAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRG-------RACF 182 A E+D A FGLF + R A + ++ +AD LC+ LLGLE + + CF Sbjct: 322 EAVELDSDSADERFGLFRSPRQASKQIEKLADHYFLCHKLLGLESSTATTSVATNQKPCF 381 Query: 183 RSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQHPEMTQ---YHII 239 R+ LK+C GAC G ES E + R+ +L+ ++ WP+ G + ++E+ + + +H++ Sbjct: 382 RAQLKKCFGACHGAESPENYNERVSAALKTYQLKMWPYPGPILIEERDMQEPEHVAFHVV 441 Query: 240 QNWLWLGAVNSLEEA-------------------------------TTLIRTPAGFDHDG 268 NW ++ + +E+ + + FD D Sbjct: 442 HNWRYIAKLTLIEDLYDHGYQLADARQSIGAGMSADLTAGPNESDQRSATPSDDRFDLDI 501 Query: 269 YKILCKPLLSGN 280 Y IL + L+ Sbjct: 502 YFILVRFLVDAE 513 >UniRef50_Q1CZB4 GIY-YIG catalytic domain protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1CZB4_MYXXD Length = 404 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 75/269 (27%), Positives = 111/269 (41%), Gaps = 25/269 (9%) Query: 4 RLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLS 63 L S +E AA++ H+R RPGVY G SD + LY+GKSV +R+R+LS Sbjct: 38 GLRSRIMESRVAALFA---HVREHAE---NRPGVYRMLGPSDEV-LYVGKSVRVRTRLLS 90 Query: 64 HLRTP---DEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ 120 + R A ++ + RI W T E ALL E RLIK Q+PL+N +R+R C + Sbjct: 91 YFRAEAHEKAAEIIAHAHRIVWEYTPSEFAALLHEFRLIKSQRPLYNVEHKRDRGHCFIH 150 Query: 121 LNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLG--------- 171 L + V + S + +G F R A ++ ++D +L Sbjct: 151 LTREPVPRLRVVSRASSERGDYYGPFHGRSAMSDVVRAVSDLLELRDCAADTPMRLADQG 210 Query: 172 -LEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCWPWQGAVALKEQH 230 L PL + C R L RC C G + E+ R+ Q+ L L Sbjct: 211 QLFPLKQEPLCMRGQLSRCLAPCAGGCTRAEYDARVAQARAFLEGTSDT-----PLTLLR 265 Query: 231 PEMTQYHIIQNWLWLGAVNSLEEATTLIR 259 M + + + E L+R Sbjct: 266 ERMALAARRLLFEYAAELRDRAERLELMR 294 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.134 0.386 Lambda K H 0.267 0.0416 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,729,561,984 Number of Sequences: 3077464 Number of extensions: 71005071 Number of successful extensions: 197608 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 713 Number of HSP's successfully gapped in prelim test: 476 Number of HSP's that attempted gapping in prelim test: 193332 Number of HSP's gapped (non-prelim): 1309 length of query: 295 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 167 effective length of database: 646,480,964 effective search space: 107962320988 effective search space used: 107962320988 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 92 (40.0 bits)