18/01/2012 10:33:52 : INFO  : Run start: Wed Jan 18 10:33:50 GMT 2012
18/01/2012 10:33:59 : INFO  : Initialised job
18/01/2012 10:34:01 : INFO  : Renaming log file 'phyre2_20120118_103349.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/c57ae061ff625d82/phyre_20120118_103349.log'
18/01/2012 10:34:03 : INFO  : Initialised job:
Sequence
>batch____
MSIIKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPPLGLLIGGIDFKQFAVT
LRDAQGDIPAVVMHYGVFIQNVFDFLIVAFAIFMAIKLINKLNRKKEEPAAAPAPTKEEV
LLTEIRDLLKEQNNRS

18/01/2012 10:34:04 : INFO  : Checked sequence
18/01/2012 10:34:10 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 10:34:12 : INFO  : PSI-BLAST 3 iterations
18/01/2012 10:35:19 : INFO  : PSI-BLAST 5 iterations
18/01/2012 10:36:21 : INFO  : Finished PSI-BLAST
18/01/2012 10:36:24 : INFO  : Running Buildali to generate a3m file
18/01/2012 10:42:50 : INFO  : Converting to HMM
18/01/2012 10:42:53 : INFO  : Calibrating HMM
18/01/2012 10:43:10 : INFO  : Searching HMM database
18/01/2012 10:46:02 : INFO  : Finished buildali
18/01/2012 10:46:04 : INFO  : Predicting secondary structure
18/01/2012 10:46:16 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 10:46:18 : INFO  : Predicting Disordered regions
18/01/2012 10:46:23 : INFO  : Predicted Disorder (Disopred)
18/01/2012 10:46:26 : INFO  : Running memsat_svm check
18/01/2012 10:51:16 : INFO  : Running memsat_svm full
18/01/2012 10:56:27 : INFO  : Predicted Transmembrane (memsat_svm) ID 'c57ae061ff625d82'
18/01/2012 10:56:30 : INFO  : Initialising fold library search
18/01/2012 10:56:35 : INFO  : Initialised search input
18/01/2012 10:56:39 : INFO  : Building Ensemble models
18/01/2012 10:56:45 : INFO  : Building hh.c2oarA_.model.1.pdb
18/01/2012 10:57:11 : INFO  : Building hh.d2oara1.model.2.pdb
18/01/2012 10:57:31 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/c57ae061ff625d82/hh.d2oara1.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/c57ae061ff625d82/d2oara1.2.pdb
18/01/2012 10:57:37 : INFO  : Building c2oarA_.1.pdb
18/01/2012 10:58:02 : INFO  : Building d2oara1.2.pdb
18/01/2012 10:58:27 : INFO  : Building c3hzqA_.3.pdb
18/01/2012 10:58:52 : INFO  : Building c3qnqD_.4.pdb
18/01/2012 10:59:15 : INFO  : Building d1q1va_.5.pdb
18/01/2012 10:59:36 : INFO  : Building c1vdfB_.6.pdb
18/01/2012 10:59:57 : INFO  : Building c3t98A_.7.pdb
18/01/2012 11:00:18 : INFO  : Building d1lm8v_.8.pdb
18/01/2012 11:00:40 : INFO  : Building c3n53B_.9.pdb
18/01/2012 11:01:02 : INFO  : Building d1sh0a_.10.pdb
18/01/2012 11:01:22 : INFO  : Building c2uutA_.11.pdb
18/01/2012 11:01:45 : INFO  : Building c2qzjC_.12.pdb
18/01/2012 11:02:04 : INFO  : Building c3snxB_.13.pdb
18/01/2012 11:02:25 : INFO  : Building c1eysH_.14.pdb
18/01/2012 11:02:46 : INFO  : Building c2b43D_.15.pdb
18/01/2012 11:03:07 : INFO  : Building c2rddB_.16.pdb
18/01/2012 11:03:28 : INFO  : Building d1khva_.17.pdb
18/01/2012 11:03:49 : INFO  : Building c2l35B_.18.pdb
18/01/2012 11:04:11 : INFO  : Building c2l34B_.19.pdb
18/01/2012 11:04:32 : INFO  : Building c2l34A_.20.pdb
18/01/2012 11:05:41 : INFO  : Finished HH model building
18/01/2012 11:05:43 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 11:06:44 : INFO  : html domain output complete ID 'c57ae061ff625d82'
18/01/2012 11:28:16 : INFO  : Run end  : Wed Jan 18 11:28:15 GMT 2012
