Phyre 2 alignment of P0A742 with c3lewA_

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Job Description | P0A742
Confidence | 3.18% | Date | Thu Jan 5 11:04:44 GMT 2012
Rank | 57 | Aligned Residues | 33
% Identity | 21% | Template | c3lewA_
PDB info | PDB header:sugar binding protein | Chain: A: PDB Molecule:susd-like carbohydrate binding protein; | PDBTitle: crystal structure of susd-like carbohydrate binding protein2 (yp_001298396.1) from bacteroides vulgatus atcc 8482 at 1.70 a3 resolution
Resolution | 1.70 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | I | K | L | I | N | K | L | N | R | K | K | E | E | P | A | A | A | P | A | P | T | K | E | E | V | L | L | T | E | I | R | D | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | I | N | K | L | N | D | L | K | T | A | R | G | . | A | K | T | I | H | T | N | L | S | Q | Q | D | L | L | E | T | I | W | L | E
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 386 | . | . | . | 390 | . | . | . | . | . | . | . | . |  | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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