Phyre 2 Results for P0A742

Email | l.a.kelley@imperial.ac.uk
Description | P0A742
Date | Thu Jan 5 11:04:44 GMT 2012
Unique Job ID | c57ae061ff625d82

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2oarA_ |
|  | 100.0 | 36 | PDB header:membrane protein Chain: A: PDB Molecule:large-conductance mechanosensitive channel; PDBTitle: mechanosensitive channel of large conductance (mscl)
2 | d2oara1 |
|  | 100.0 | 33 | Fold:Gated mechanosensitive channel Superfamily:Gated mechanosensitive channel Family:Gated mechanosensitive channel
3 | c3hzqA_ |
|  | 100.0 | 50 | PDB header:membrane protein Chain: A: PDB Molecule:large-conductance mechanosensitive channel; PDBTitle: structure of a tetrameric mscl in an expanded intermediate2 state
4 | c3qnqD_ |
|  | 82.2 | 14 | PDB header:membrane protein, transport protein Chain: D: PDB Molecule:pts system, cellobiose-specific iic component; PDBTitle: crystal structure of the transporter chbc, the iic component from the2 n,n'-diacetylchitobiose-specific phosphotransferase system
5 | d1q1va_ |
|  | 35.3 | 28 | Fold:Another 3-helical bundle Superfamily:DEK C-terminal domain Family:DEK C-terminal domain
6 | c1vdfB_ |
|  | 25.8 | 38 | PDB header:extracellular matrix protein Chain: B: PDB Molecule:cartilage oligomeric matrix protein; PDBTitle: assembly domain of cartilage oligomeric matrix protein
7 | c3t98A_ |
|  | 18.9 | 41 | PDB header:protein transport Chain: A: PDB Molecule:nuclear pore complex protein nup54; PDBTitle: molecular architecture of the transport channel of the nuclear pore2 complex: nup54/nup58
8 | d1lm8v_ |
|  | 17.8 | 38 | Fold:Prealbumin-like Superfamily:VHL Family:VHL
9 | c3n53B_ |
|  | 13.9 | 35 | PDB header:transcription Chain: B: PDB Molecule:response regulator receiver modulated diguanylate cyclase; PDBTitle: crystal structure of a response regulator receiver modulated2 diguanylate cyclase from pelobacter carbinolicus
10 | d1sh0a_ |
|  | 12.6 | 12 | Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:RNA-dependent RNA-polymerase
11 | c2uutA_ |
|  | 11.5 | 29 | PDB header:hydrolase Chain: A: PDB Molecule:rna-directed rna polymerase; PDBTitle: the 2.4 angstrom resolution structure of the d346g mutant2 of the sapporo virus rdrp polymerase
12 | c2qzjC_ |
|  | 11.4 | 23 | PDB header:transcription Chain: C: PDB Molecule:two-component response regulator; PDBTitle: crystal structure of a two-component response regulator from2 clostridium difficile
13 | c3snxB_ |
|  | 10.7 | 16 | PDB header:sugar binding protein Chain: B: PDB Molecule:putative susd-like carbohydrate binding protein; PDBTitle: crystal structure of a putative susd-like carbohydrate binding protein2 (bt_1439) from bacteroides thetaiotaomicron vpi-5482 at 1.88 a3 resolution
14 | c1eysH_ |
|  | 10.6 | 19 | PDB header:electron transport Chain: H: PDB Molecule:photosynthetic reaction center; PDBTitle: crystal structure of photosynthetic reaction center from a2 thermophilic bacterium, thermochromatium tepidum
15 | c2b43D_ |
|  | 10.5 | 12 | PDB header:viral protein Chain: D: PDB Molecule:non-structural polyprotein; PDBTitle: crystal structure of the norwalk virus rna dependent rna polymerase2 from strain hu/nlv/dresden174/1997/ge
16 | c2rddB_ |
|  | 9.8 | 6 | PDB header:membrane protein/transport protein Chain: B: PDB Molecule:upf0092 membrane protein yajc; PDBTitle: x-ray crystal structure of acrb in complex with a novel2 transmembrane helix.
17 | d1khva_ |
|  | 9.1 | 18 | Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:RNA-dependent RNA-polymerase
18 | c2l35B_ |
|  | 8.4 | 15 | PDB header:protein binding Chain: B: PDB Molecule:tyro protein tyrosine kinase-binding protein; PDBTitle: structure of the dap12-nkg2c transmembrane heterotrimer
19 | c2l34B_ |
|  | 8.0 | 15 | PDB header:protein binding Chain: B: PDB Molecule:tyro protein tyrosine kinase-binding protein; PDBTitle: structure of the dap12 transmembrane homodimer
20 | c2l34A_ |
|  | 8.0 | 15 | PDB header:protein binding Chain: A: PDB Molecule:tyro protein tyrosine kinase-binding protein; PDBTitle: structure of the dap12 transmembrane homodimer
21 | c3p5nA_ |
| not modelled | 7.4 | 18 | PDB header:transport protein Chain: A: PDB Molecule:riboflavin uptake protein; PDBTitle: structure and mechanism of the s component of a bacterial ecf2 transporter
22 | c2jo1A_ |
| not modelled | 6.6 | 26 | PDB header:hydrolase regulator Chain: A: PDB Molecule:phospholemman; PDBTitle: structure of the na,k-atpase regulatory protein fxyd1 in2 micelles
23 | c3nahC_ |
| not modelled | 6.5 | 24 | PDB header:transferase Chain: C: PDB Molecule:rna dependent rna polymerase; PDBTitle: crystal structures and functional analysis of murine norovirus rna-2 dependent rna polymerase
24 | c2jp3A_ |
| not modelled | 6.4 | 16 | PDB header:transcription Chain: A: PDB Molecule:fxyd domain-containing ion transport regulator 4; PDBTitle: solution structure of the human fxyd4 (chif) protein in sds2 micelles
25 | d1xr6a_ |
| not modelled | 6.2 | 24 | Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:RNA-dependent RNA-polymerase
26 | c1c94B_ |
| not modelled | 6.1 | 36 | PDB header:gene regulation Chain: B: PDB Molecule:retro-gcn4 leucine zipper; PDBTitle: reversing the sequence of the gcn4 leucine zipper does not2 affect its fold.
27 | d2b3wa1 |
| not modelled | 6.0 | 38 | Fold:YbiA-like Superfamily:YbiA-like Family:YbiA-like
28 | d1u09a_ |
| not modelled | 5.8 | 18 | Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:RNA-dependent RNA-polymerase
29 | c3si5X_ |
| not modelled | 5.8 | 38 | PDB header:cell cycle Chain: X: PDB Molecule:protein casc5; PDBTitle: kinetochore-bubr1 kinase complex
30 | c2ijd1_ |
| not modelled | 5.6 | 24 | PDB header:hydrolase, transferase Chain: 1: PDB Molecule:picornain 3c, rna-directed rna polymerase; PDBTitle: crystal structure of the poliovirus precursor protein 3cd
31 | d1xdpa1 |
| not modelled | 5.5 | 14 | Fold:Spectrin repeat-like Superfamily:PPK N-terminal domain-like Family:PPK N-terminal domain-like