Phyre 2 alignment of P0A742 with c3c9pA_

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Job Description | P0A742
Confidence | 3.03% | Date | Thu Jan 5 11:04:44 GMT 2012
Rank | 69 | Aligned Residues | 17
% Identity | 41% | Template | c3c9pA_
PDB info | PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:uncharacterized protein sp1917; | PDBTitle: crystal structure of uncharacterized protein sp1917
Resolution | 1.96 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 118 | . | 120 | . | . | . | . | . | . |  |  |  |  |  |  | . | . | . | 130 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query Sequence |  | E | E | V | L | L | T | E | I | R | . | . | . | . | . | . | D | L | L | K | E | Q | N | N
Query Conservation |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | D | P | L | X | Q | E | I | R | R | L | D | K | L | V | D | W | L | A | K | G | K | T
Template Known Secondary structure |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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