Email l.a.kelley@imperial.ac.uk Description P64559 Date Thu Jan 5 12:09:26 GMT 2012 Unique Job ID c562a64caab8b037

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1x6iB_ 100.0 100 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein ygfy; PDBTitle: crystal structure of ygfy from escherichia coli 2 c2jr5A_ 100.0 52 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0350 protein vc_2471; PDBTitle: solution structure of upf0350 protein vc_2471. northeast2 structural genomics target vcr36 3 d1puza_ 99.9 32 Fold:YgfY-like Superfamily:YgfY-like Family:YgfY-like 4 c2lm4A_ 99.9 22 PDB header:protein binding Chain: A: PDB Molecule:succinate dehydrogenase assembly factor 2, mitochondrial; PDBTitle: solution nmr structure of mitochondrial succinate dehydrogenase2 assembly factor 2 from saccharomyces cerevisiae, northeast structural3 genomics consortium target yt682a 5 c3ermD_ 54.7 10 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:uncharacterized conserved protein; PDBTitle: the crystal structure of a conserved protein with unknown function2 from pseudomonas syringae pv. tomato str. dc3000 6 d2cqxa1 43.2 8 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 7 d1au7a1 37.4 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 8 d1yrnb_ 30.9 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 9 c2da4A_ 30.1 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein dkfzp686k21156; PDBTitle: solution structure of the homeobox domain of the2 hypothetical protein, dkfzp686k21156 10 c2dmtA_ 29.8 20 PDB header:dna binding protein Chain: A: PDB Molecule:homeobox protein barh-like 1; PDBTitle: solution structure of the homeobox domain of homeobox2 protein barh-like 1 11 d1xrxa1 28.3 17 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:SeqA N-terminal domain-like 12 c1xrxD_ 28.3 17 PDB header:replication inhibitor Chain: D: PDB Molecule:seqa protein; PDBTitle: crystal structure of a dna-binding protein 13 d1ddfa_ 26.7 10 Fold:DEATH domain Superfamily:DEATH domain Family:DEATH domain, DD 14 d1x2ma1 25.3 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 15 d1wnaa1 24.7 19 Fold:TTHA1528-like Superfamily:TTHA1528-like Family:TTHA1528-like 16 c2dmuA_ 24.7 17 PDB header:dna binding protein Chain: A: PDB Molecule:homeobox protein goosecoid; PDBTitle: solution structure of the homeobox domain of homeobox2 protein goosecoid 17 d1ftta_ 23.0 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 18 c2e19A_ 20.9 8 PDB header:transcription Chain: A: PDB Molecule:transcription factor 8; PDBTitle: solution structure of the homeobox domain from human nil-2-2 a zinc finger protein, transcription factor 8 19 d1x4oa1 20.1 21 Fold:Surp module (SWAP domain) Superfamily:Surp module (SWAP domain) Family:Surp module (SWAP domain) 20 d2e1oa1 19.4 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 21 c2xcjB_ not modelled 19.1 9 PDB header:viral protein Chain: B: PDB Molecule:c protein; PDBTitle: crystal structure of p2 c, the immunity repressor of2 temperate e. coli phage p2 22 d1p7jb_ not modelled 18.6 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 23 d1ig7a_ not modelled 18.5 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 24 d1b8ia_ not modelled 18.4 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 25 d2ecba1 not modelled 18.3 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 26 c3bs3A_ not modelled 17.8 16 PDB header:dna binding protein Chain: A: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of a putative dna-binding protein from bacteroides2 fragilis 27 c2wl8D_ not modelled 17.7 10 PDB header:protein transport Chain: D: PDB Molecule:peroxisomal biogenesis factor 19; PDBTitle: x-ray crystal structure of pex19p 28 d1ahdp_ not modelled 17.5 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 29 d1rh2a_ not modelled 17.3 11 Fold:4-helical cytokines Superfamily:4-helical cytokines Family:Interferons/interleukin-10 (IL-10) 30 d1ztra1 not modelled 16.8 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 31 c2da2A_ not modelled 16.7 24 PDB header:transcription Chain: A: PDB Molecule:alpha-fetoprotein enhancer binding protein; PDBTitle: solution structure of the second homeobox domain of at-2 binding transcription factor 1 (atbf1) 32 d1uhsa_ not modelled 16.7 5 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 33 c2lk2A_ not modelled 16.6 13 PDB header:transcription Chain: A: PDB Molecule:homeobox protein tgif1; PDBTitle: solution nmr structure of homeobox domain (171-248) of human homeobox2 protein tgif1, northeast structural genomics consortium target3 hr4411b 34 c2djnA_ not modelled 16.6 20 PDB header:transcription Chain: A: PDB Molecule:homeobox protein dlx-5; PDBTitle: the solution structure of the homeobox domain of human2 homeobox protein dlx-5 35 d1ug0a_ not modelled 16.2 27 Fold:Surp module (SWAP domain) Superfamily:Surp module (SWAP domain) Family:Surp module (SWAP domain) 36 c2da3A_ not modelled 16.0 10 PDB header:transcription Chain: A: PDB Molecule:alpha-fetoprotein enhancer binding protein; PDBTitle: solution structure of the third homeobox domain of at-2 binding transcription factor 1 (atbf1) 37 d1au1a_ not modelled 15.8 11 Fold:4-helical cytokines Superfamily:4-helical cytokines Family:Interferons/interleukin-10 (IL-10) 38 d1fjla_ not modelled 15.5 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 39 c2da1A_ not modelled 15.4 13 PDB header:transcription Chain: A: PDB Molecule:alpha-fetoprotein enhancer binding protein; PDBTitle: solution structure of the first homeobox domain of at-2 binding transcription factor 1 (atbf1) 40 c3gxvA_ not modelled 15.4 9 PDB header:hydrolase/replication Chain: A: PDB Molecule:replicative dna helicase; PDBTitle: three-dimensional structure of n-terminal domain of dnab2 helicase from helicobacter pylori and its interactions with3 primase 41 c2l9rA_ not modelled 14.9 20 PDB header:transcription Chain: A: PDB Molecule:homeobox protein nkx-3.1; PDBTitle: solution nmr structure of homeobox domain of homeobox protein nkx-3.12 from homo sapiens, northeast structural genomics consortium target3 hr6470a 42 d1p7ia_ not modelled 14.5 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 43 d1jgga_ not modelled 14.1 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 44 d1x2na1 not modelled 14.0 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 45 c3omtA_ not modelled 14.0 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: putative antitoxin component, chu_2935 protein, from xre family from2 prevotella buccae. 46 d1fkma2 not modelled 13.5 17 Fold:Left-handed superhelix Superfamily:Ypt/Rab-GAP domain of gyp1p Family:Ypt/Rab-GAP domain of gyp1p 47 d1fjlb_ not modelled 13.4 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 48 d2r5yb1 not modelled 13.3 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 49 d1dzfa1 not modelled 13.3 28 Fold:Restriction endonuclease-like Superfamily:Eukaryotic RPB5 N-terminal domain Family:Eukaryotic RPB5 N-terminal domain 50 d2r1jl1 not modelled 13.1 8 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 51 d2hddb_ not modelled 12.7 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 52 c3nauA_ not modelled 12.1 15 PDB header:transcription Chain: A: PDB Molecule:zinc fingers and homeoboxes protein 2; PDBTitle: crystal structure of zhx2 hd2 (zinc-fingers and homeoboxes protein 2,2 homeodomain 2) 53 d2icta1 not modelled 12.1 16 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:SinR domain-like 54 d1lfup_ not modelled 12.1 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 55 d1x57a1 not modelled 12.1 11 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:EDF1-like 56 d1y7ya1 not modelled 11.9 5 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:SinR domain-like 57 c3ocmB_ not modelled 11.7 10 PDB header:membrane protein Chain: B: PDB Molecule:putative membrane protein; PDBTitle: the crystal structure of a domain from a possible membrane protein of2 bordetella parapertussis 58 d1k61a_ not modelled 11.0 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 59 c2dmnA_ not modelled 10.6 14 PDB header:transcription Chain: A: PDB Molecule:homeobox protein tgif2lx; PDBTitle: the solution structure of the homeobox domain of human2 homeobox protein tgif2lx 60 d1gt0c1 not modelled 10.5 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 61 d2d6fc2 not modelled 10.3 14 Fold:DCoH-like Superfamily:GAD domain-like Family:GAD domain 62 c2da5A_ not modelled 10.3 13 PDB header:dna binding protein Chain: A: PDB Molecule:zinc fingers and homeoboxes protein 3; PDBTitle: solution structure of the second homeobox domain of zinc2 fingers and homeoboxes protein 3 (triple homeobox 13 protein) 63 c3f52A_ not modelled 10.2 8 PDB header:transcription activator Chain: A: PDB Molecule:clp gene regulator (clgr); PDBTitle: crystal structure of the clp gene regulator clgr from c. glutamicum 64 d1le8b_ not modelled 9.8 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 65 d1zq1c2 not modelled 9.6 18 Fold:DCoH-like Superfamily:GAD domain-like Family:GAD domain 66 c3oq9C_ not modelled 9.3 12 PDB header:apoptosis Chain: C: PDB Molecule:tumor necrosis factor receptor superfamily member 6; PDBTitle: structure of the fas/fadd death domain assembly 67 c2da7A_ not modelled 9.2 8 PDB header:dna binding protein Chain: A: PDB Molecule:zinc finger homeobox protein 1b; PDBTitle: solution structure of the homeobox domain of zinc finger2 homeobox protein 1b (smad interacting protein 1) 68 d1le8a_ not modelled 8.9 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 69 d1bw5a_ not modelled 8.7 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 70 c2ef8A_ not modelled 8.5 11 PDB header:transcription regulator Chain: A: PDB Molecule:putative transcription factor; PDBTitle: crystal structure of c.ecot38is 71 d1hdpa_ not modelled 8.3 12 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 72 c1jqsB_ not modelled 8.3 8 PDB header:ribosome Chain: B: PDB Molecule:elongation factor g; PDBTitle: fitting of l11 protein and elongation factor g (domain g'2 and v) in the cryo-em map of e. coli 70s ribosome bound3 with ef-g and gmppcp, a nonhydrolysable gtp analog 73 d1adra_ not modelled 8.2 8 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 74 d1octc1 not modelled 8.1 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 75 c3fwcO_ not modelled 8.1 17 PDB header:cell cycle, transcription Chain: O: PDB Molecule:protein sus1; PDBTitle: sac3:sus1:cdc31 complex 76 c3a4cA_ not modelled 8.0 17 PDB header:cell cycle, replication Chain: A: PDB Molecule:dna replication factor cdt1; PDBTitle: crystal structure of cdt1 c terminal domain 77 c2k40A_ not modelled 7.8 15 PDB header:dna binding protein Chain: A: PDB Molecule:homeobox expressed in es cells 1; PDBTitle: nmr structure of hesx-1 homeodomain double mutant r31l/e42l 78 c1s7eA_ not modelled 7.8 17 PDB header:transcription Chain: A: PDB Molecule:hepatocyte nuclear factor 6; PDBTitle: solution structure of hnf-6 79 d1ocpa_ not modelled 7.7 12 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 80 d1ys7a1 not modelled 7.5 9 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:PhoB-like 81 d1llib_ not modelled 7.5 3 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 82 c2dmsA_ not modelled 7.4 15 PDB header:dna binding protein Chain: A: PDB Molecule:homeobox protein otx2; PDBTitle: solution structure of the homeobox domain of homeobox2 protein otx2 83 d1utxa_ not modelled 7.3 14 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:SinR domain-like 84 d2ecca1 not modelled 7.3 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 85 c2k0sA_ not modelled 7.3 20 PDB header:structural protein Chain: A: PDB Molecule:adp-ribosylation factor-like protein 2-binding PDBTitle: solution nmr structure of protein bc066483 86 d2cuea1 not modelled 7.2 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 87 c3tgnA_ not modelled 7.1 16 PDB header:transcription Chain: A: PDB Molecule:adc operon repressor adcr; PDBTitle: crystal structure of the zinc-dependent marr family transcriptional2 regulator adcr in the zn(ii)-bound state 88 c3jw4C_ not modelled 7.1 19 PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulator, marr/emrr family; PDBTitle: the structure of a putative marr family transcriptional regulator from2 clostridium acetobutylicum 89 c3qwlA_ not modelled 7.1 15 PDB header:hydrolase activator Chain: A: PDB Molecule:tbc1 domain family member 7; PDBTitle: crystal structure of human tbc1 domain family member 7 90 d1fexa_ not modelled 7.1 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Myb/SANT domain 91 d2fq4a2 not modelled 7.0 16 Fold:Tetracyclin repressor-like, C-terminal domain Superfamily:Tetracyclin repressor-like, C-terminal domain Family:Tetracyclin repressor-like, C-terminal domain 92 c3fmtF_ not modelled 7.0 18 PDB header:replication inhibitor/dna Chain: F: PDB Molecule:protein seqa; PDBTitle: crystal structure of seqa bound to dna 93 d2croa_ not modelled 6.9 6 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Phage repressors 94 c2e8nA_ not modelled 6.9 7 PDB header:transferase, signaling protein Chain: A: PDB Molecule:ephrin type-a receptor 2; PDBTitle: solution structure of the c-terminal sam-domain of ephaa2:2 ephrin type-a receptor 2 precursor (ec 2.7.10.1) 95 c3a01A_ not modelled 6.9 22 PDB header:gene regulation/dna Chain: A: PDB Molecule:homeodomain-containing protein; PDBTitle: crystal structure of aristaless and clawless homeodomains bound to dna 96 d1pufb_ not modelled 6.9 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 97 c3ecoB_ not modelled 6.8 13 PDB header:transcription Chain: B: PDB Molecule:mepr; PDBTitle: crystal structure of mepr, a transcription regulator of the2 staphylococcus aureus multidrug efflux pump mepa 98 c2k6oA_ not modelled 6.8 19 PDB header:antimicrobial protein Chain: A: PDB Molecule:cathelicidin antimicrobial peptide; PDBTitle: human ll-37 structure 99 d1vhqa_ not modelled 6.7 17 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:DJ-1/PfpI