BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (711 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9ACP0 Intracellular growth attenuator protein igaA n=1... 1216 0.0 UniRef50_O86988 Flagellar operon control protein umoB n=5 Tax=En... 525 e-147 UniRef50_D2U385 Flagellar operon control protein (Membrane prote... 481 e-134 UniRef50_B2Q5U8 Putative uncharacterized protein n=2 Tax=Provide... 470 e-131 UniRef50_UPI0001911667 hypothetical protein Salmonellentericaent... 459 e-127 UniRef50_D1P0D6 Flagellar operon control protein UmoB n=2 Tax=Pr... 429 e-118 UniRef50_UPI000190EFBE hypothetical protein Salmonentericaenteri... 234 1e-59 UniRef50_C2LEI2 Possible flagellar operon control protein umoB n... 219 2e-55 UniRef50_UPI000190DBE1 intracellular growth attenuator protein I... 123 2e-26 UniRef50_B4X424 Putative uncharacterized protein n=1 Tax=Alcaniv... 100 1e-19 UniRef50_C0ATY0 Putative uncharacterized protein n=1 Tax=Proteus... 95 9e-18 UniRef50_C0ATY2 Putative uncharacterized protein n=1 Tax=Proteus... 86 5e-15 UniRef50_Q5XWE0 Putative intracellular growth attenuator protein... 61 2e-07 UniRef50_P43885 D-3-phosphoglycerate dehydrogenase n=399 Tax=Bac... 44 0.023 >UniRef50_Q9ACP0 Intracellular growth attenuator protein igaA n=173 Tax=cellular organisms RepID=IGAA_SALTY Length = 710 Score = 1216 bits (3146), Expect = 0.0, Method: Compositional matrix adjust. Identities = 596/710 (83%), Positives = 655/710 (92%) Query: 1 MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESL 60 MSTI+IF+AALLACSLLA W +V+SRR LPW +AF DAQTRKL PEERSAVENYL++L Sbjct: 1 MSTILIFIAALLACSLLAIWRFRVKSRRGSLPWISAFQDAQTRKLLPEERSAVENYLDNL 60 Query: 61 TQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLP 120 +Q+ QVPGPTGASAAPISL LNAESN+V++LTH+ITRYGI+TDDPNKWRYYLDSVEVHLP Sbjct: 61 SQIQQVPGPTGASAAPISLTLNAESNSVVILTHSITRYGITTDDPNKWRYYLDSVEVHLP 120 Query: 121 PFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYALQPVPSTQASIRGEESE 180 PFWEQYINDEN VELI TD+LPLVISLNGHTLQEYMQE+R YALQ STQASIRGEESE Sbjct: 121 PFWEQYINDENNVELILTDTLPLVISLNGHTLQEYMQESRGYALQNTASTQASIRGEESE 180 Query: 181 QIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGA 240 QIELLNIR+ETHEEYALSRP GLREALLIVASFL+FFFCLITPDVFVPW+ GGA+LLL A Sbjct: 181 QIELLNIRQETHEEYALSRPAGLREALLIVASFLLFFFCLITPDVFVPWMIGGAILLLAA 240 Query: 241 GLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQ 300 GLWGLFAPP+KS+LREIHCLRGTPRRWGLFGEN+QEQINNISLGIIDL+YPAHWQPYI Q Sbjct: 241 GLWGLFAPPSKSALREIHCLRGTPRRWGLFGENNQEQINNISLGIIDLIYPAHWQPYITQ 300 Query: 301 DLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPL 360 DLGQQTDIDIYLDRHV RQGR+LSLHDEVKNFPLQHWLRST+IA GSLLVLFMLLFWIPL Sbjct: 301 DLGQQTDIDIYLDRHVARQGRFLSLHDEVKNFPLQHWLRSTVIAIGSLLVLFMLLFWIPL 360 Query: 361 DMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNSPF 420 DMP+KFTLSWMKGAQTIEAT+VKQL AGVRVGDTL +SG GMCNI + TWS ++NSPF Sbjct: 361 DMPIKFTLSWMKGAQTIEATTVKQLEKAGVRVGDTLHLSGKGMCNIHSGATWSGQSNSPF 420 Query: 421 LPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQKSG 480 +PFDCSQIIWNDA +LPLPES+LVNKA AL++AVNRQLHPKPED+SRVSASLRSAIQKSG Sbjct: 421 MPFDCSQIIWNDAPALPLPESDLVNKAMALSQAVNRQLHPKPEDDSRVSASLRSAIQKSG 480 Query: 481 MVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVLLR 540 MVLLDDFGDIVLKTADLC+A+D+CVRLKNALVNLGNSKDW+ALVKRANAGKLDGVNVLLR Sbjct: 481 MVLLDDFGDIVLKTADLCAAEDECVRLKNALVNLGNSKDWNALVKRANAGKLDGVNVLLR 540 Query: 541 PVSAESLDNLVATSTAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYD 600 PVSAESL+NLV TSTAPFI+ ETARAAQSLNSPAPGGFLI SDEGS+ VDQ WPS LYD Sbjct: 541 PVSAESLENLVTTSTAPFISRETARAAQSLNSPAPGGFLIASDEGSELVDQTWPSTPLYD 600 Query: 601 YPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTL 660 YP QEQW+AFQ+LAQ LM TPF+AEGIVT ++TDANGTQHI LH IPD+SG WRYL TTL Sbjct: 601 YPAQEQWSAFQRLAQTLMQTPFSAEGIVTSVYTDANGTQHISLHRIPDKSGWWRYLGTTL 660 Query: 661 LLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCLNPQLITPSESLI 710 L+L M+ SA+YNG+QA+RRYQRHRTRM +IQ YYESCLNP+L E+LI Sbjct: 661 LMLAMIVSAVYNGIQAFRRYQRHRTRMADIQEYYESCLNPRLTVSPENLI 710 >UniRef50_O86988 Flagellar operon control protein umoB n=5 Tax=Enterobacteriaceae RepID=UMOB_PROMI Length = 702 Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust. Identities = 286/708 (40%), Positives = 418/708 (59%), Gaps = 26/708 (3%) Query: 3 TIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESLTQ 62 +++I +++ ++A +L R R + A RKLT ++ + +YL Sbjct: 4 SVIILAIFMISLFIMAAFLFFKRRRLDGSYHLPSLAKPTYRKLTQDDYGVISDYLSYFG- 62 Query: 63 VLQVPGPTGASAAPISL----ALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVH 118 T +A SL + + V L + + R+ S++ N WRYY+D+VE+H Sbjct: 63 -------TSKFSAGYSLQNFPEIPTKGEVVTTLRNIVNRFAGSSEGINHWRYYIDAVEIH 115 Query: 119 LPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYAL----QPVPSTQAS- 173 +PP Y+ EN ++++ T S+P+VI +NGH L++ + +L +P+ S S Sbjct: 116 IPPLLVPYLQQENVLDVVCTPSIPIVIGVNGHFLKDEKSHFSALSLKQLSEPILSNGTST 175 Query: 174 IRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWL--A 231 I+ E + LL+IR+ET+EEY L G LI +++ L+ P VF+PW+ A Sbjct: 176 IQKNEGDAAHLLHIRQETNEEYRLHHSSGFWNGSLICLGLILWLTALMMPQVFLPWIMAA 235 Query: 232 GGALLLLGAGLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYP 291 GG L+LG L+ ++ P KS +E+HC +G +RWGLFG D Q+ NISLG IDLVYP Sbjct: 236 GGTFLVLG--LFLIYRPIIKSRKQEVHCFKGRLKRWGLFGNFDHGQVKNISLGGIDLVYP 293 Query: 292 AHWQPYIAQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVL 351 HW+PYI D+ + T +++Y + HV++QG YLSLHDE KN+P + ++++ I SL ++ Sbjct: 294 PHWEPYIQNDIDKVTYLEMYPNHHVIKQGPYLSLHDEEKNYPYKRYIKNIIFVVCSLFII 353 Query: 352 FMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGT 411 ML + PL + +K T SW+K ++ T+ +L A + VGD ++ G GMC + + Sbjct: 354 GMLYLYQPLSLSMKLTFSWIKESEPHLVTNFTELETAKLHVGDIIQAKGVGMCYMPPN-- 411 Query: 412 WSAKTNSP-FLPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSA 470 S+K N F PFDCS I WN++ +P+PES + KA AL V QLHP +RV+ Sbjct: 412 LSSKNNKTIFAPFDCSGIYWNNSNPMPMPESSTIEKAAALLYLVEEQLHPV--SNNRVNP 469 Query: 471 SLRSAIQKSGMVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAG 530 SL AI KSGM LLD+F I+LKT DLC +++C+RLK ALVNL N DW +LV+RA +G Sbjct: 470 SLGQAITKSGMNLLDNFDGIILKTQDLCPRENECIRLKMALVNLSNVNDWPSLVQRAESG 529 Query: 531 KLDGVNVLLRPVSAESLDNLVATSTAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVD 590 KL G NVLLR VSAE+L+ LV T+T+ FI E +AA LNSP PGG L++SDE VD Sbjct: 530 KLTGTNVLLRAVSAEALEKLVDTTTSSFIYREIDKAAILLNSPPPGGVLLISDERKQLVD 589 Query: 591 QPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRS 650 + S+++ P EQW Q+L+ +L+HTPFN G++T + DANGT I LH +PD Sbjct: 590 YASNTNSVFEPTPLEQWRELQRLSDILLHTPFNTGGVITGMVIDANGTLQIFLHSMPDSM 649 Query: 651 GLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCL 698 L Y+ TLLL +G I N RR +++ RM +I YYE C Sbjct: 650 TLLYYIGNTLLLFFAIGFLILNLFFIIRRRRQNNQRMHKISQYYEHCF 697 >UniRef50_D2U385 Flagellar operon control protein (Membrane protein) n=1 Tax=Arsenophonus nasoniae RepID=D2U385_9ENTR Length = 728 Score = 481 bits (1237), Expect = e-134, Method: Compositional matrix adjust. Identities = 252/666 (37%), Positives = 385/666 (57%), Gaps = 9/666 (1%) Query: 40 AQTRKLTPEERSAVENYLESLTQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYG 99 A RK+T +E + +YL+ T Q+ T + V +AITR+ Sbjct: 55 ANYRKITSDEYQIICDYLK-YTNSEQILIKTKEVTIRKLFDFPKRNAWVSTGCNAITRFS 113 Query: 100 ISTDDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQET 159 + + N WRY++DS EVHLP E Y+ +N +++++TD+LPLVIS+N H L ++ Q+ Sbjct: 114 LINEQDNLWRYFIDSKEVHLPRQLEPYLTTQNVMDVVYTDTLPLVISVNNHFLADFKQDF 173 Query: 160 RSYALQ---PVPSTQASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMF 216 + + P A I+ + ++ + +RKET EEY L+R L + +I ++ Sbjct: 174 KQFHFAREITFPPVNALIQESGQQLVKFIKVRKETLEEYKLNRSFSLWGSGVICVGLIVC 233 Query: 217 FFCLITPDVFVPWLAGGALLLLGAGLWGLFAPPA--KSSLREIHCLRGTPRRWGLFGEND 274 L +F PWL L G++ L+ P K ++I C+ G P+R GLFGE D Sbjct: 234 ALSLFVIAIFFPWLMLFGGLTFFVGVYLLYRPYIFRKRYQQDIRCVVGKPKRLGLFGEFD 293 Query: 275 QEQINNISLGIIDLVYPAHWQPYIAQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPL 334 + + +NISL IDL+YP+HW+P++ ++ Q +ID+Y + +VVRQGRYLSLH+E + +P Sbjct: 294 KGKKHNISLAGIDLIYPSHWEPFLEYEIDQAINIDMYANGYVVRQGRYLSLHEEARRYPY 353 Query: 335 QHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGD 394 + + ++ ++ S ++ +L F+ P+ +P + W+ G T+ +L ++VGD Sbjct: 354 KRYGKNLMLMITSFFLMLLLHFYEPVHLPARLIFHWLNGENYRHTTNYTELEVMPLQVGD 413 Query: 395 TLRISGTGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKATALTEAV 454 + + G GMC + FLPFDCS I WN+ P+PES++V K +L+ V Sbjct: 414 YIAVKGVGMCYVPID-LIEKGNRFDFLPFDCSGIYWNNISPSPIPESDIVEKVFSLSTTV 472 Query: 455 NRQLHPKPEDESRVSASLRSAIQKSGMVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNL 514 +QL+ D +V+ LR I KSGM LLD+F DI+LKT LC ++C RLK+ALVNL Sbjct: 473 KQQLYFNNLDH-KVNQQLRREIMKSGMNLLDNFSDIILKTNSLCPLNNECFRLKSALVNL 531 Query: 515 GNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFITHETARAAQSLNSPA 574 ++ +W LV RA GKL G+NV+LRP AE+L+ LV +T+ +I E +AA LNSP Sbjct: 532 SDTYEWSVLVARAKNGKLAGINVILRPGGAETLEKLVNETTSFYINREIEKAAALLNSPL 591 Query: 575 PGGFLIVSDEGSDFVD-QPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFT 633 P G L++S+EG FVD + S + Y P ++W QKL+ +LMHTPF A+GI+TK+F Sbjct: 592 PRGVLLISEEGKQFVDLVSFHSPVIDSYTPLQKWQELQKLSDILMHTPFEAKGIITKLFV 651 Query: 634 DANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAY 693 DA GT+HI LH P L RY+S LL L ++ + I N + R + ++ R+ I+ Y Sbjct: 652 DAKGTRHIILHSKPSSMLLLRYISAFLLNLVLMATFILNFILVITRKRINKWRLKSIRQY 711 Query: 694 YESCLN 699 YE C N Sbjct: 712 YEHCFN 717 >UniRef50_B2Q5U8 Putative uncharacterized protein n=2 Tax=Providencia RepID=B2Q5U8_PROST Length = 697 Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust. Identities = 256/703 (36%), Positives = 404/703 (57%), Gaps = 20/703 (2%) Query: 1 MSTIVIFLAA-LLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLES 59 M T VI +A +++ +++A +L R R + + A+ RK+ + + YL + Sbjct: 1 MLTYVIIMAIFIISLTIMASFLYFRRGRNSGVYQIPSQAEPSYRKMIDNDYQIISQYLRT 60 Query: 60 LTQVLQVPGPT-GASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVH 118 P P+ A P L NA + + +++TR+ + + N WRY++D++EV Sbjct: 61 ------NPFPSQSAEQTPWQLKKNAV---IATVCNSVTRFNLRQEQANSWRYFIDTIEVK 111 Query: 119 LPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYALQPVPSTQASIRGEE 178 LP E Y+ +N +EL+ T+ LPL+ISLN +L+++ E S +Q + + +A+I Sbjct: 112 LPHQLEPYLQQKNVMELVETNHLPLIISLNNFSLKDFNYEWTSDDIQEIVTPEAAIHERG 171 Query: 179 SEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLL 238 +++L +RKET EE+ L+ G LLI SFL+ + LI W GA Sbjct: 172 EPNVQVLRVRKETIEEHRLNHSSGWLGTLLICLSFLLGYLALIAIPFLQSWGFVGAFFCF 231 Query: 239 GAGLWGLF---APPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQ 295 AGL LF P K L+++ C+ G P+RW L+GE D+ Q + +S+G IDL YP+HW+ Sbjct: 232 VAGLLALFRLRVFPKK--LQDVQCVFGQPKRWELYGELDKRQSSTVSIGGIDLYYPSHWE 289 Query: 296 PYIAQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLL 355 PYI +L + T ID+Y V+R G++LSLH+E + +P + + ++ +I A LLVLF++ Sbjct: 290 PYIHHELNKATQIDMYPSGQVLRHGQFLSLHEEERYYPYRRYKKNLLILATGLLVLFLMF 349 Query: 356 FWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAK 415 + + +P+K +W++GA+ I+ +V +L ++VGD+L G GMC S Sbjct: 350 SYQSMCLPIKLGFAWLEGAEKIKVMNVAELETRKLKVGDSLSAKGVGMC--YRPPNLSDT 407 Query: 416 TNSPFLPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSA 475 ++ F PFDCS + WN+ P PESE++ +A L V +QLHP+ ++ V+ L+ Sbjct: 408 NHAQFAPFDCSGVYWNNMNLTPDPESEVIERAIRLLNTVQKQLHPE-KNSVGVNPRLQRD 466 Query: 476 IQKSGMVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGV 535 I KSGM ++ DF +I+LKT +LC + C +LK+AL NLG++ DW LV +A+ GKL G Sbjct: 467 IMKSGMNIIFDFSEIILKTNELCYQEHACSKLKSALTNLGSTDDWGTLVVKASTGKLSGA 526 Query: 536 NVLLRPVSAESLDNLVATSTAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPS 595 +VLLR SAE+L+ LV +T FI E + A LNSP PGG L++SDE VD S Sbjct: 527 HVLLRAGSAEALEKLVEVTTYEFIKVEVEKEAAKLNSPPPGGVLLISDENKALVDFIVGS 586 Query: 596 ASLYDYPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRY 655 + D P ++W +++A +L++TPF+ EGI+T + TDANGT HI LH PD L +Y Sbjct: 587 -TFNDMTPLQRWVELKRIAGLLINTPFDVEGIITDLSTDANGTLHITLHSKPDEKVLSQY 645 Query: 656 LSTTLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCL 698 + ++L L + + NG R ++ R+ I+ YY+ C Sbjct: 646 VISSLFTLFLGIGVLLNGTLVIFRIMNNKKRLRNIKRYYDKCF 688 >UniRef50_UPI0001911667 hypothetical protein Salmonellentericaenterica_06076 n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E98-3139 RepID=UPI0001911667 Length = 325 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 239/281 (85%), Positives = 262/281 (93%) Query: 1 MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESL 60 MSTI+IF+AALLACSLLA W +V+SRR LPW +AF DAQTRKL PEERSAVENYL++L Sbjct: 1 MSTILIFIAALLACSLLAIWRFRVKSRRGSLPWFSAFQDAQTRKLLPEERSAVENYLDNL 60 Query: 61 TQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLP 120 +Q+ QVPGPTGASAAPISL LNAESN+V++LTH+ITRYGI+TDDPNKWRYYLDSVEVHLP Sbjct: 61 SQIQQVPGPTGASAAPISLTLNAESNSVVILTHSITRYGITTDDPNKWRYYLDSVEVHLP 120 Query: 121 PFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYALQPVPSTQASIRGEESE 180 PFWEQYINDEN VELI TD+LPLVISLNGHTLQEYMQE+R YALQ STQASIRGEESE Sbjct: 121 PFWEQYINDENNVELILTDTLPLVISLNGHTLQEYMQESRGYALQNTASTQASIRGEESE 180 Query: 181 QIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGA 240 QIELLNIR+ETHEEYALSRP GLREALLIVASFL+FFFCLITPDVFVPW+ GGA+LLL A Sbjct: 181 QIELLNIRQETHEEYALSRPAGLREALLIVASFLLFFFCLITPDVFVPWMIGGAILLLAA 240 Query: 241 GLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNI 281 GLWGLFAPP+KS+LREIHCLRGTPRRWGLFGEN+QEQINNI Sbjct: 241 GLWGLFAPPSKSALREIHCLRGTPRRWGLFGENNQEQINNI 281 >UniRef50_D1P0D6 Flagellar operon control protein UmoB n=2 Tax=Providencia RepID=D1P0D6_9ENTR Length = 699 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 232/700 (33%), Positives = 391/700 (55%), Gaps = 15/700 (2%) Query: 1 MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYL-ES 59 ++TI+I + + ++ +L R RR + + A +K+ + + YL + Sbjct: 2 LNTIIILALIVASLIIMVLFLFFRRGRRSSVYQIPSLAAPSFKKMIESDYQILSQYLNHN 61 Query: 60 LTQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHL 119 ++ + VP S+ V + +A+TR+ + + N WRY++D+VEV L Sbjct: 62 ASKNIHVPSQPAWQIKRNSI--------VATICNAVTRFNLRQEQGNSWRYFIDTVEVQL 113 Query: 120 PPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYALQPVPSTQASIRGEES 179 P E ++ +N +E+I TD LPL+++LN H+L+E+ E + + +A+I+ E Sbjct: 114 PEQLEPFLQRQNVMEIIDTDHLPLIVALNSHSLKEFSHEWSASSSVESVLPEAAIQEGEQ 173 Query: 180 EQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLG 239 I+LL +RKE+ EE+ L G A+++ SF + + +I+ V W A+++ Sbjct: 174 NTIQLLKVRKESKEEHRLHNSSGWLGAIVVSLSFFLGYLTMISIPVLQGWGLTFAIIVFC 233 Query: 240 AGLWGLFAPPA-KSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYI 298 G++ LF +++ C+ G P+RW L+GE D++ + +S+G +DL YP++W PY+ Sbjct: 234 IGVFLLFRLRILPKPYQDVQCIYGQPKRWELYGELDKKYSSTVSIGGVDLHYPSYWTPYL 293 Query: 299 AQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWI 358 +L Q T+ID+Y VV+ GR LS+H+E + +P + + ++ ++ + +LL L + + + Sbjct: 294 KYELNQATNIDLYSSGEVVKYGRCLSIHEEERYYPYKRFKKNILMFSSALLFLVLTMTYQ 353 Query: 359 PLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNS 418 P+ +P+K ++W++G + T +L+ ++VGDTL G GMC + + + Sbjct: 354 PISLPIKLGIAWLEGTHKVVVTDPMELSIKKIKVGDTLLAKGVGMC--YRPPNLNDENQA 411 Query: 419 PFLPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQK 478 F+PFDCS + WN+ + P+SE VN A L +V QLHP +D ++ L+ I K Sbjct: 412 LFVPFDCSGMYWNNINLVTEPQSETVNHAIDLLNSVKNQLHPD-KDAPGINPRLQREIMK 470 Query: 479 SGMVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNS-KDWDALVKRANAGKLDGVNV 537 SGM ++ DF +I+LKT LC + CV+LKNAL NLG S DW LVK+A++GKL G +V Sbjct: 471 SGMNIIFDFSEIILKTNALCGGSESCVKLKNALSNLGGSADDWSTLVKKASSGKLSGAHV 530 Query: 538 LLRPVSAESLDNLVATSTAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSAS 597 LLR SAE+L+ LV +T FI E + + LNSP PGG L++SDE VD P S Sbjct: 531 LLRAGSAEALEKLVEDTTYDFIRKEIEKEIRKLNSPPPGGVLLISDENHPLVDL-IPINS 589 Query: 598 LYDYPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLS 657 + ++W Q+LA +L +TPF+ +G+VT + DANGT +I LH + L ++ Sbjct: 590 FNEMTQLQRWYELQRLASILNNTPFDVQGVVTNLSVDANGTLYISLHEALNEDALPLFVC 649 Query: 658 TTLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESC 697 + +L + + NG R ++ R+ +I YY+ C Sbjct: 650 RAMFILFLAICVVINGSLIIIRVLNNKRRLRKITEYYDKC 689 >UniRef50_UPI000190EFBE hypothetical protein Salmonentericaenterica_26402 n=2 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI000190EFBE Length = 131 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 108/131 (82%), Positives = 120/131 (91%) Query: 324 SLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVK 383 SLHDEVKNFPLQHWLRST+IA GSLLVLFMLLFWIPLDMP+KFTLSWMKGAQTIEAT+VK Sbjct: 1 SLHDEVKNFPLQHWLRSTVIAIGSLLVLFMLLFWIPLDMPIKFTLSWMKGAQTIEATTVK 60 Query: 384 QLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESEL 443 QL AGVRVGDTL +SG GMCNI + TWS ++NSPF+PFDCSQIIWNDA +LPLPES+L Sbjct: 61 QLEKAGVRVGDTLHLSGKGMCNIHSGATWSGQSNSPFMPFDCSQIIWNDAPALPLPESDL 120 Query: 444 VNKATALTEAV 454 VNKA AL++AV Sbjct: 121 VNKAMALSQAV 131 >UniRef50_C2LEI2 Possible flagellar operon control protein umoB n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LEI2_PROMI Length = 357 Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 120/336 (35%), Positives = 189/336 (56%), Gaps = 13/336 (3%) Query: 3 TIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESLTQ 62 +++I +++ ++A +L R R + A RKLT ++ + +YL Sbjct: 28 SVIILAIFMISLFIMAAFLFFKRRRLDGSYHLPSLAKPTYRKLTQDDYGVISDYLSYFGT 87 Query: 63 VLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLPPF 122 G + + I + V L + + R+ S++ N WRYY+D+VE+H+PP Sbjct: 88 SKFSSGYSLQNFPEIP----TKGEVVTTLRNIVNRFAGSSEGLNHWRYYIDAVEIHIPPL 143 Query: 123 WEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYAL----QPVPSTQAS-IRGE 177 Y+ EN ++++ T S+P+VI +NGH L++ + +L +P+ S S I+ Sbjct: 144 LVPYLQQENVLDVVCTPSIPIVIGVNGHFLKDEKSHFSALSLKQLSEPILSNGTSTIQKN 203 Query: 178 ESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWL--AGGAL 235 E + LL+IR+ET+EEY L G LI +++ L+ P VF+PW+ AGG Sbjct: 204 EGDAAHLLHIRQETNEEYRLHHSSGFWNGSLICLGLILWLTALMMPQVFLPWIMAAGGTF 263 Query: 236 LLLGAGLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQ 295 L+LG L+ ++ P KS +E+HC +G +RWGLFG D Q+ NISLG IDLVYP HW+ Sbjct: 264 LVLG--LFLIYRPIIKSRKQEVHCFKGRLKRWGLFGNFDHGQVKNISLGGIDLVYPPHWE 321 Query: 296 PYIAQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKN 331 PYI D+ + T +++Y + HV++QG YLSLHDE KN Sbjct: 322 PYIQNDIDKVTYLEMYPNHHVIKQGPYLSLHDEEKN 357 >UniRef50_UPI000190DBE1 intracellular growth attenuator protein IgaA n=4 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI000190DBE1 Length = 73 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 55/73 (75%), Positives = 64/73 (87%) Query: 614 AQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNG 673 AQ LM TPF+AEGIVT ++TDANGTQHI LH IPD+SG WRYL TTLL+L M+ SA+YNG Sbjct: 1 AQTLMQTPFSAEGIVTSVYTDANGTQHISLHRIPDKSGWWRYLGTTLLMLAMIVSAVYNG 60 Query: 674 VQAWRRYQRHRTR 686 +QA+RRYQRHRTR Sbjct: 61 IQAFRRYQRHRTR 73 >UniRef50_B4X424 Putative uncharacterized protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X424_9GAMM Length = 709 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 140/611 (22%), Positives = 237/611 (38%), Gaps = 82/611 (13%) Query: 86 NNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLVI 145 N V L+ R+G++T+ W + VEV LP E ++ + N ++ + +V+ Sbjct: 76 NAVFALSGPYLRHGLTTNGNTVWHDTIGGVEVLLPYDAEYFLREHNDALVVLAEKKAIVV 135 Query: 146 SLN------GHTLQEYMQETRSYALQPVPSTQASIRGEESEQ---------IELLNIRKE 190 +LN G + +E + + + + EE EQ + + R E Sbjct: 136 ALNDDFTLAGGEERNQRREQKQQQWESGDHGELARVVEEDEQTREDDPAGTLRIREQRDE 195 Query: 191 THEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGG-----ALLLLGAGLWGL 245 T E A R RGL A+L +++ F CL L G LL + L+ Sbjct: 196 TDAEIASRRGRGL--AMLPAFLWILAFVCLGIAIGVDSSLIGSISLATGLLFVVIALFRF 253 Query: 246 FAPPAKSSLREIHCLRG----TPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQD 301 F P+ ++++ + G TP E + QI+ I V P HW+P+I + Sbjct: 254 FRKPSPDKPQKVNQVSGQICLTPV---AVDEQNNVQISVTLNESIGFVLPEHWRPFIEYE 310 Query: 302 LGQQTDIDIYLDRH-VVRQGRYLSLHDEVKNFPLQHWLRSTIIA-AGSLLVLFMLLFWIP 359 GQ ++ + +D + VV G +SL +EV+ FP +W R +A G+ +LF L + Sbjct: 311 DGQNQEMAVRVDDYSVVSYGNRMSLDEEVRRFPPVYWGRHLTLALVGATALLFPLASFTE 370 Query: 360 LDMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNSP 419 L L FT + GAQ + + +G + I G G C + T G Sbjct: 371 LSRDLLFTGQLLSGAQETTPQTPDAVLQQPPAIGAPVSIEGRGQCALNTDG--------- 421 Query: 420 FLP-FDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSA--SLRSAI 476 + P FDC +I W + +P+S+ + + + RQL + ++R SL + + Sbjct: 422 YRPTFDCRRIHWGSS----VPQSQHLEEPEII-----RQLRDRTLLQTRTDGYLSLMATM 472 Query: 477 Q--------KSGMV-----LLDDFGDIVLKTADLCSAKDDCVRLKNALVNL------GNS 517 Q K M+ L+D ++ SA+ C R+ +++ Sbjct: 473 QGWDTYRNGKPVMLRHLPELIDTLDSACSQSGTSSSAESQCERIHRHMLSRLIFTLDHQP 532 Query: 518 KDWDAL--VKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFITHETARAAQSLNSPAP 575 + W +L + AG D V + ++L + A+ + + Sbjct: 533 ETWTSLRNAVQTQAGSDDPVTAITSEAHVKALRQRLNQLANELDMERGVNIARDITNSQQ 592 Query: 576 GGFLIVSDEGSDFVDQPWPSASLYD---YPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIF 632 GG I V P PS + D P Q +A + PF G+VT Sbjct: 593 GGVQI------RLVQGPVPSTLMPDDTTSPYQASIDAMTAMIDNAAGQPFKLRGMVTDYQ 646 Query: 633 TDANGTQHIGL 643 GT + L Sbjct: 647 VVDGGTAVLSL 657 >UniRef50_C0ATY0 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0ATY0_9ENTR Length = 236 Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 17/217 (7%) Query: 3 TIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESLTQ 62 +++I +++ ++A +L R R + A RKLT ++ + +YL Sbjct: 28 SVIILAILMISLFIMAAFLFFKRRRLDGSHHLPSLAKPTYRKLTSDDYGLISDYLSYFG- 86 Query: 63 VLQVPGPTGASAAPISL----ALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVH 118 T ++ SL + + V L + + R+ S++ N WRYY+D+VE+H Sbjct: 87 -------TSDFSSGYSLQNFPEMPIKGEVVTTLRNIVNRFAGSSEGLNHWRYYIDAVEIH 139 Query: 119 LPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYAL----QPVPSTQAS- 173 +PP Y+ EN ++++ T S+P+V+ +NGH L++ + +L +P+ + +S Sbjct: 140 IPPLLVPYLQQENVLDVVCTPSIPIVVGVNGHFLKDEKIHFSALSLKQRSEPILANGSST 199 Query: 174 IRGEESEQIELLNIRKETHEEYALSRPRGLREALLIV 210 I+ E + LL IR+ET+EEY L G ALL V Sbjct: 200 IQKNEGDAAHLLQIREETNEEYRLHNSSGFGMALLFV 236 >UniRef50_C0ATY2 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0ATY2_9ENTR Length = 135 Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 3/119 (2%) Query: 330 KNFPLQHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAG 389 KN+P + ++++ I SL ++ ML + PL + +K + SW+K + T+ +L Sbjct: 4 KNYPYKRYIKNIIFVFWSLFIIGMLYLYQPLSLSMKLSFSWLKDTKPHLVTNFTELETTD 63 Query: 390 VRVGDTLRISGTGMCNIRTSGTWSAKTNSP-FLPFDCSQIIWNDARSLPLPESELVNKA 447 + VGD ++ G GMC + + S+K N F PFDCS I WN++ +P+PES + K+ Sbjct: 64 LHVGDIIQAKGVGMCYMPPN--LSSKNNKTIFAPFDCSGIYWNNSNPMPMPESSTIEKS 120 >UniRef50_Q5XWE0 Putative intracellular growth attenuator protein (Fragment) n=1 Tax=Pectobacterium carotovorum subsp. carotovorum RepID=Q5XWE0_PECCC Length = 70 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 6/74 (8%) Query: 44 KLTPEERSAVENYL--ESLTQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGIS 101 +LT +ER A+E YL E+ Q + P P SL +SN V +TH ITRYG+S Sbjct: 1 RLTEDERIAIERYLAQENSQQTTPLDIPNAQPKLPRSL----QSNRVYPITHTITRYGLS 56 Query: 102 TDDPNKWRYYLDSV 115 TD NKWRYY+D + Sbjct: 57 TDAQNKWRYYIDKL 70 >UniRef50_P43885 D-3-phosphoglycerate dehydrogenase n=399 Tax=Bacteria RepID=SERA_HAEIN Length = 410 Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 27/136 (19%) Query: 515 GNSKDWDALVKRANAGKLDGVNVLLRPVSAESL-----------DNLVATSTAPFITHET 563 G D DAL + GKL G + + PV S+ DN++ T P I T Sbjct: 242 GTVVDIDALAQALKDGKLQGAAIDVFPVEPASINEEFISPLREFDNVILT---PHIGGST 298 Query: 564 ARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFN 623 A A +++ G F+ SD GS +P SL P+ + + L+H N Sbjct: 299 AEAQENIGFEVAGKFVKYSDNGSTLSSVNFPEVSL----PEHEG------TKRLLHIHEN 348 Query: 624 AEGIVTK---IFTDAN 636 GI+ K IF +AN Sbjct: 349 RPGILNKLNQIFVEAN 364 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q9ACP0 Intracellular growth attenuator protein igaA n=1... 1036 0.0 UniRef50_O86988 Flagellar operon control protein umoB n=5 Tax=En... 968 0.0 UniRef50_B2Q5U8 Putative uncharacterized protein n=2 Tax=Provide... 953 0.0 UniRef50_D1P0D6 Flagellar operon control protein UmoB n=2 Tax=Pr... 929 0.0 UniRef50_D2U385 Flagellar operon control protein (Membrane prote... 909 0.0 UniRef50_B4X424 Putative uncharacterized protein n=1 Tax=Alcaniv... 566 e-159 UniRef50_C2LEI2 Possible flagellar operon control protein umoB n... 466 e-129 UniRef50_UPI0001911667 hypothetical protein Salmonellentericaent... 368 e-100 UniRef50_C0ATY0 Putative uncharacterized protein n=1 Tax=Proteus... 268 7e-70 UniRef50_UPI000190EFBE hypothetical protein Salmonentericaenteri... 201 9e-50 UniRef50_C0ATY2 Putative uncharacterized protein n=1 Tax=Proteus... 172 3e-41 UniRef50_UPI000190DBE1 intracellular growth attenuator protein I... 119 4e-25 UniRef50_Q5XWE0 Putative intracellular growth attenuator protein... 77 3e-12 Sequences not found previously or not previously below threshold: UniRef50_B8L3I2 Putative uncharacterized protein n=1 Tax=Stenotr... 78 1e-12 >UniRef50_Q9ACP0 Intracellular growth attenuator protein igaA n=173 Tax=cellular organisms RepID=IGAA_SALTY Length = 710 Score = 1036 bits (2679), Expect = 0.0, Method: Composition-based stats. Identities = 596/710 (83%), Positives = 655/710 (92%) Query: 1 MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESL 60 MSTI+IF+AALLACSLLA W +V+SRR LPW +AF DAQTRKL PEERSAVENYL++L Sbjct: 1 MSTILIFIAALLACSLLAIWRFRVKSRRGSLPWISAFQDAQTRKLLPEERSAVENYLDNL 60 Query: 61 TQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLP 120 +Q+ QVPGPTGASAAPISL LNAESN+V++LTH+ITRYGI+TDDPNKWRYYLDSVEVHLP Sbjct: 61 SQIQQVPGPTGASAAPISLTLNAESNSVVILTHSITRYGITTDDPNKWRYYLDSVEVHLP 120 Query: 121 PFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYALQPVPSTQASIRGEESE 180 PFWEQYINDEN VELI TD+LPLVISLNGHTLQEYMQE+R YALQ STQASIRGEESE Sbjct: 121 PFWEQYINDENNVELILTDTLPLVISLNGHTLQEYMQESRGYALQNTASTQASIRGEESE 180 Query: 181 QIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGA 240 QIELLNIR+ETHEEYALSRP GLREALLIVASFL+FFFCLITPDVFVPW+ GGA+LLL A Sbjct: 181 QIELLNIRQETHEEYALSRPAGLREALLIVASFLLFFFCLITPDVFVPWMIGGAILLLAA 240 Query: 241 GLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQ 300 GLWGLFAPP+KS+LREIHCLRGTPRRWGLFGEN+QEQINNISLGIIDL+YPAHWQPYI Q Sbjct: 241 GLWGLFAPPSKSALREIHCLRGTPRRWGLFGENNQEQINNISLGIIDLIYPAHWQPYITQ 300 Query: 301 DLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPL 360 DLGQQTDIDIYLDRHV RQGR+LSLHDEVKNFPLQHWLRST+IA GSLLVLFMLLFWIPL Sbjct: 301 DLGQQTDIDIYLDRHVARQGRFLSLHDEVKNFPLQHWLRSTVIAIGSLLVLFMLLFWIPL 360 Query: 361 DMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNSPF 420 DMP+KFTLSWMKGAQTIEAT+VKQL AGVRVGDTL +SG GMCNI + TWS ++NSPF Sbjct: 361 DMPIKFTLSWMKGAQTIEATTVKQLEKAGVRVGDTLHLSGKGMCNIHSGATWSGQSNSPF 420 Query: 421 LPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQKSG 480 +PFDCSQIIWNDA +LPLPES+LVNKA AL++AVNRQLHPKPED+SRVSASLRSAIQKSG Sbjct: 421 MPFDCSQIIWNDAPALPLPESDLVNKAMALSQAVNRQLHPKPEDDSRVSASLRSAIQKSG 480 Query: 481 MVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVLLR 540 MVLLDDFGDIVLKTADLC+A+D+CVRLKNALVNLGNSKDW+ALVKRANAGKLDGVNVLLR Sbjct: 481 MVLLDDFGDIVLKTADLCAAEDECVRLKNALVNLGNSKDWNALVKRANAGKLDGVNVLLR 540 Query: 541 PVSAESLDNLVATSTAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYD 600 PVSAESL+NLV TSTAPFI+ ETARAAQSLNSPAPGGFLI SDEGS+ VDQ WPS LYD Sbjct: 541 PVSAESLENLVTTSTAPFISRETARAAQSLNSPAPGGFLIASDEGSELVDQTWPSTPLYD 600 Query: 601 YPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTL 660 YP QEQW+AFQ+LAQ LM TPF+AEGIVT ++TDANGTQHI LH IPD+SG WRYL TTL Sbjct: 601 YPAQEQWSAFQRLAQTLMQTPFSAEGIVTSVYTDANGTQHISLHRIPDKSGWWRYLGTTL 660 Query: 661 LLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCLNPQLITPSESLI 710 L+L M+ SA+YNG+QA+RRYQRHRTRM +IQ YYESCLNP+L E+LI Sbjct: 661 LMLAMIVSAVYNGIQAFRRYQRHRTRMADIQEYYESCLNPRLTVSPENLI 710 >UniRef50_O86988 Flagellar operon control protein umoB n=5 Tax=Enterobacteriaceae RepID=UMOB_PROMI Length = 702 Score = 968 bits (2502), Expect = 0.0, Method: Composition-based stats. Identities = 279/703 (39%), Positives = 410/703 (58%), Gaps = 14/703 (1%) Query: 2 STIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESLT 61 +++I +++ ++A +L R R + A RKLT ++ + +YL Sbjct: 3 LSVIILAIFMISLFIMAAFLFFKRRRLDGSYHLPSLAKPTYRKLTQDDYGVISDYLSYFG 62 Query: 62 QVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLPP 121 G + + + + V L + + R+ S++ N WRYY+D+VE+H+PP Sbjct: 63 TSKFSAGYSLQNFP----EIPTKGEVVTTLRNIVNRFAGSSEGINHWRYYIDAVEIHIPP 118 Query: 122 FWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYAL----QPVPSTQAS-IRG 176 Y+ EN ++++ T S+P+VI +NGH L++ + +L +P+ S S I+ Sbjct: 119 LLVPYLQQENVLDVVCTPSIPIVIGVNGHFLKDEKSHFSALSLKQLSEPILSNGTSTIQK 178 Query: 177 EESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALL 236 E + LL+IR+ET+EEY L G LI +++ L+ P VF+PW+ Sbjct: 179 NEGDAAHLLHIRQETNEEYRLHHSSGFWNGSLICLGLILWLTALMMPQVFLPWIMAAGGT 238 Query: 237 LLGAGLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQP 296 L GL+ ++ P KS +E+HC +G +RWGLFG D Q+ NISLG IDLVYP HW+P Sbjct: 239 FLVLGLFLIYRPIIKSRKQEVHCFKGRLKRWGLFGNFDHGQVKNISLGGIDLVYPPHWEP 298 Query: 297 YIAQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLF 356 YI D+ + T +++Y + HV++QG YLSLHDE KN+P + ++++ I SL ++ ML Sbjct: 299 YIQNDIDKVTYLEMYPNHHVIKQGPYLSLHDEEKNYPYKRYIKNIIFVVCSLFIIGMLYL 358 Query: 357 WIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKT 416 + PL + +K T SW+K ++ T+ +L A + VGD ++ G GMC + S+K Sbjct: 359 YQPLSLSMKLTFSWIKESEPHLVTNFTELETAKLHVGDIIQAKGVGMCYMP--PNLSSKN 416 Query: 417 NSP-FLPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSA 475 N F PFDCS I WN++ +P+PES + KA AL V QLHP +RV+ SL A Sbjct: 417 NKTIFAPFDCSGIYWNNSNPMPMPESSTIEKAAALLYLVEEQLHPV--SNNRVNPSLGQA 474 Query: 476 IQKSGMVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGV 535 I KSGM LLD+F I+LKT DLC +++C+RLK ALVNL N DW +LV+RA +GKL G Sbjct: 475 ITKSGMNLLDNFDGIILKTQDLCPRENECIRLKMALVNLSNVNDWPSLVQRAESGKLTGT 534 Query: 536 NVLLRPVSAESLDNLVATSTAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPS 595 NVLLR VSAE+L+ LV T+T+ FI E +AA LNSP PGG L++SDE VD + Sbjct: 535 NVLLRAVSAEALEKLVDTTTSSFIYREIDKAAILLNSPPPGGVLLISDERKQLVDYASNT 594 Query: 596 ASLYDYPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRY 655 S+++ P EQW Q+L+ +L+HTPFN G++T + DANGT I LH +PD L Y Sbjct: 595 NSVFEPTPLEQWRELQRLSDILLHTPFNTGGVITGMVIDANGTLQIFLHSMPDSMTLLYY 654 Query: 656 LSTTLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCL 698 + TLLL +G I N RR +++ RM +I YYE C Sbjct: 655 IGNTLLLFFAIGFLILNLFFIIRRRRQNNQRMHKISQYYEHCF 697 >UniRef50_B2Q5U8 Putative uncharacterized protein n=2 Tax=Providencia RepID=B2Q5U8_PROST Length = 697 Score = 953 bits (2464), Expect = 0.0, Method: Composition-based stats. Identities = 252/705 (35%), Positives = 402/705 (57%), Gaps = 18/705 (2%) Query: 1 MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESL 60 ++ ++I +++ +++A +L R R + + A+ RK+ + + YL + Sbjct: 2 LTYVIIMAIFIISLTIMASFLYFRRGRNSGVYQIPSQAEPSYRKMIDNDYQIISQYLRT- 60 Query: 61 TQVLQVPGPT-GASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHL 119 P P+ A P L NA + + +++TR+ + + N WRY++D++EV L Sbjct: 61 -----NPFPSQSAEQTPWQLKKNA---VIATVCNSVTRFNLRQEQANSWRYFIDTIEVKL 112 Query: 120 PPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYALQPVPSTQASIRGEES 179 P E Y+ +N +EL+ T+ LPL+ISLN +L+++ E S +Q + + +A+I Sbjct: 113 PHQLEPYLQQKNVMELVETNHLPLIISLNNFSLKDFNYEWTSDDIQEIVTPEAAIHERGE 172 Query: 180 EQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLG 239 +++L +RKET EE+ L+ G LLI SFL+ + LI W GA Sbjct: 173 PNVQVLRVRKETIEEHRLNHSSGWLGTLLICLSFLLGYLALIAIPFLQSWGFVGAFFCFV 232 Query: 240 AGLWGLFAPPA-KSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYI 298 AGL LF L+++ C+ G P+RW L+GE D+ Q + +S+G IDL YP+HW+PYI Sbjct: 233 AGLLALFRLRVFPKKLQDVQCVFGQPKRWELYGELDKRQSSTVSIGGIDLYYPSHWEPYI 292 Query: 299 AQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWI 358 +L + T ID+Y V+R G++LSLH+E + +P + + ++ +I A LLVLF++ + Sbjct: 293 HHELNKATQIDMYPSGQVLRHGQFLSLHEEERYYPYRRYKKNLLILATGLLVLFLMFSYQ 352 Query: 359 PLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNS 418 + +P+K +W++GA+ I+ +V +L ++VGD+L G GMC S ++ Sbjct: 353 SMCLPIKLGFAWLEGAEKIKVMNVAELETRKLKVGDSLSAKGVGMCY--RPPNLSDTNHA 410 Query: 419 PFLPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQK 478 F PFDCS + WN+ P PESE++ +A L V +QLHP+ ++ V+ L+ I K Sbjct: 411 QFAPFDCSGVYWNNMNLTPDPESEVIERAIRLLNTVQKQLHPE-KNSVGVNPRLQRDIMK 469 Query: 479 SGMVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVL 538 SGM ++ DF +I+LKT +LC + C +LK+AL NLG++ DW LV +A+ GKL G +VL Sbjct: 470 SGMNIIFDFSEIILKTNELCYQEHACSKLKSALTNLGSTDDWGTLVVKASTGKLSGAHVL 529 Query: 539 LRPVSAESLDNLVATSTAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASL 598 LR SAE+L+ LV +T FI E + A LNSP PGG L++SDE VD S Sbjct: 530 LRAGSAEALEKLVEVTTYEFIKVEVEKEAAKLNSPPPGGVLLISDENKALVDFIVGST-F 588 Query: 599 YDYPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLST 658 D P ++W +++A +L++TPF+ EGI+T + TDANGT HI LH PD L +Y+ + Sbjct: 589 NDMTPLQRWVELKRIAGLLINTPFDVEGIITDLSTDANGTLHITLHSKPDEKVLSQYVIS 648 Query: 659 TLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCL---NP 700 +L L + + NG R ++ R+ I+ YY+ C NP Sbjct: 649 SLFTLFLGIGVLLNGTLVIFRIMNNKKRLRNIKRYYDKCFEADNP 693 >UniRef50_D1P0D6 Flagellar operon control protein UmoB n=2 Tax=Providencia RepID=D1P0D6_9ENTR Length = 699 Score = 929 bits (2401), Expect = 0.0, Method: Composition-based stats. Identities = 234/706 (33%), Positives = 393/706 (55%), Gaps = 18/706 (2%) Query: 1 MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYL-ES 59 ++TI+I + + ++ +L R RR + + A +K+ + + YL + Sbjct: 2 LNTIIILALIVASLIIMVLFLFFRRGRRSSVYQIPSLAAPSFKKMIESDYQILSQYLNHN 61 Query: 60 LTQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHL 119 ++ + VP S+ V + +A+TR+ + + N WRY++D+VEV L Sbjct: 62 ASKNIHVPSQPAWQIKRNSI--------VATICNAVTRFNLRQEQGNSWRYFIDTVEVQL 113 Query: 120 PPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYALQPVPSTQASIRGEES 179 P E ++ +N +E+I TD LPL+++LN H+L+E+ E + + +A+I+ E Sbjct: 114 PEQLEPFLQRQNVMEIIDTDHLPLIVALNSHSLKEFSHEWSASSSVESVLPEAAIQEGEQ 173 Query: 180 EQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLG 239 I+LL +RKE+ EE+ L G A+++ SF + + +I+ V W A+++ Sbjct: 174 NTIQLLKVRKESKEEHRLHNSSGWLGAIVVSLSFFLGYLTMISIPVLQGWGLTFAIIVFC 233 Query: 240 AGLWGLFAPPA-KSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYI 298 G++ LF +++ C+ G P+RW L+GE D++ + +S+G +DL YP++W PY+ Sbjct: 234 IGVFLLFRLRILPKPYQDVQCIYGQPKRWELYGELDKKYSSTVSIGGVDLHYPSYWTPYL 293 Query: 299 AQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWI 358 +L Q T+ID+Y VV+ GR LS+H+E + +P + + ++ ++ + +LL L + + + Sbjct: 294 KYELNQATNIDLYSSGEVVKYGRCLSIHEEERYYPYKRFKKNILMFSSALLFLVLTMTYQ 353 Query: 359 PLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNS 418 P+ +P+K ++W++G + T +L+ ++VGDTL G GMC + + + Sbjct: 354 PISLPIKLGIAWLEGTHKVVVTDPMELSIKKIKVGDTLLAKGVGMCY--RPPNLNDENQA 411 Query: 419 PFLPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQK 478 F+PFDCS + WN+ + P+SE VN A L +V QLHP +D ++ L+ I K Sbjct: 412 LFVPFDCSGMYWNNINLVTEPQSETVNHAIDLLNSVKNQLHPD-KDAPGINPRLQREIMK 470 Query: 479 SGMVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNS-KDWDALVKRANAGKLDGVNV 537 SGM ++ DF +I+LKT LC + CV+LKNAL NLG S DW LVK+A++GKL G +V Sbjct: 471 SGMNIIFDFSEIILKTNALCGGSESCVKLKNALSNLGGSADDWSTLVKKASSGKLSGAHV 530 Query: 538 LLRPVSAESLDNLVATSTAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSAS 597 LLR SAE+L+ LV +T FI E + + LNSP PGG L++SDE VD P S Sbjct: 531 LLRAGSAEALEKLVEDTTYDFIRKEIEKEIRKLNSPPPGGVLLISDENHPLVDL-IPINS 589 Query: 598 LYDYPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLS 657 + ++W Q+LA +L +TPF+ +G+VT + DANGT +I LH + L ++ Sbjct: 590 FNEMTQLQRWYELQRLASILNNTPFDVQGVVTNLSVDANGTLYISLHEALNEDALPLFVC 649 Query: 658 TTLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCL---NP 700 + +L + + NG R ++ R+ +I YY+ C NP Sbjct: 650 RAMFILFLAICVVINGSLIIIRVLNNKRRLRKITEYYDKCYEVDNP 695 >UniRef50_D2U385 Flagellar operon control protein (Membrane protein) n=1 Tax=Arsenophonus nasoniae RepID=D2U385_9ENTR Length = 728 Score = 909 bits (2350), Expect = 0.0, Method: Composition-based stats. Identities = 252/672 (37%), Positives = 385/672 (57%), Gaps = 9/672 (1%) Query: 34 TNAFADAQTRKLTPEERSAVENYLESLTQVLQVPGPTGASAAPISLALNAESNNVMMLTH 93 A RK+T +E + +YL+ T Q+ T + V + Sbjct: 49 LPFLIHANYRKITSDEYQIICDYLKY-TNSEQILIKTKEVTIRKLFDFPKRNAWVSTGCN 107 Query: 94 AITRYGISTDDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQ 153 AITR+ + + N WRY++DS EVHLP E Y+ +N +++++TD+LPLVIS+N H L Sbjct: 108 AITRFSLINEQDNLWRYFIDSKEVHLPRQLEPYLTTQNVMDVVYTDTLPLVISVNNHFLA 167 Query: 154 EYMQETRSYALQ---PVPSTQASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIV 210 ++ Q+ + + P A I+ + ++ + +RKET EEY L+R L + +I Sbjct: 168 DFKQDFKQFHFAREITFPPVNALIQESGQQLVKFIKVRKETLEEYKLNRSFSLWGSGVIC 227 Query: 211 ASFLMFFFCLITPDVFVPWLAGGALLLLGAGLWGLFAPPA--KSSLREIHCLRGTPRRWG 268 ++ L +F PWL L G++ L+ P K ++I C+ G P+R G Sbjct: 228 VGLIVCALSLFVIAIFFPWLMLFGGLTFFVGVYLLYRPYIFRKRYQQDIRCVVGKPKRLG 287 Query: 269 LFGENDQEQINNISLGIIDLVYPAHWQPYIAQDLGQQTDIDIYLDRHVVRQGRYLSLHDE 328 LFGE D+ + +NISL IDL+YP+HW+P++ ++ Q +ID+Y + +VVRQGRYLSLH+E Sbjct: 288 LFGEFDKGKKHNISLAGIDLIYPSHWEPFLEYEIDQAINIDMYANGYVVRQGRYLSLHEE 347 Query: 329 VKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADA 388 + +P + + ++ ++ S ++ +L F+ P+ +P + W+ G T+ +L Sbjct: 348 ARRYPYKRYGKNLMLMITSFFLMLLLHFYEPVHLPARLIFHWLNGENYRHTTNYTELEVM 407 Query: 389 GVRVGDTLRISGTGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKAT 448 ++VGD + + G GMC + FLPFDCS I WN+ P+PES++V K Sbjct: 408 PLQVGDYIAVKGVGMCYVPID-LIEKGNRFDFLPFDCSGIYWNNISPSPIPESDIVEKVF 466 Query: 449 ALTEAVNRQLHPKPEDESRVSASLRSAIQKSGMVLLDDFGDIVLKTADLCSAKDDCVRLK 508 +L+ V +QL+ D +V+ LR I KSGM LLD+F DI+LKT LC ++C RLK Sbjct: 467 SLSTTVKQQLYFNNLDH-KVNQQLRREIMKSGMNLLDNFSDIILKTNSLCPLNNECFRLK 525 Query: 509 NALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFITHETARAAQ 568 +ALVNL ++ +W LV RA GKL G+NV+LRP AE+L+ LV +T+ +I E +AA Sbjct: 526 SALVNLSDTYEWSVLVARAKNGKLAGINVILRPGGAETLEKLVNETTSFYINREIEKAAA 585 Query: 569 SLNSPAPGGFLIVSDEGSDFVDQ-PWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNAEGI 627 LNSP P G L++S+EG FVD + S + Y P ++W QKL+ +LMHTPF A+GI Sbjct: 586 LLNSPLPRGVLLISEEGKQFVDLVSFHSPVIDSYTPLQKWQELQKLSDILMHTPFEAKGI 645 Query: 628 VTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQRHRTRM 687 +TK+F DA GT+HI LH P L RY+S LL L ++ + I N + R + ++ R+ Sbjct: 646 ITKLFVDAKGTRHIILHSKPSSMLLLRYISAFLLNLVLMATFILNFILVITRKRINKWRL 705 Query: 688 MEIQAYYESCLN 699 I+ YYE C N Sbjct: 706 KSIRQYYEHCFN 717 >UniRef50_B4X424 Putative uncharacterized protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X424_9GAMM Length = 709 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 151/663 (22%), Positives = 255/663 (38%), Gaps = 82/663 (12%) Query: 85 SNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLV 144 N V L+ R+G++T+ W + VEV LP E ++ + N ++ + +V Sbjct: 75 GNAVFALSGPYLRHGLTTNGNTVWHDTIGGVEVLLPYDAEYFLREHNDALVVLAEKKAIV 134 Query: 145 ISLN------GHTLQEYMQETRSYALQPVPSTQASIRGEESEQ---------IELLNIRK 189 ++LN G + +E + + + + EE EQ + + R Sbjct: 135 VALNDDFTLAGGEERNQRREQKQQQWESGDHGELARVVEEDEQTREDDPAGTLRIREQRD 194 Query: 190 ETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGG-----ALLLLGAGLWG 244 ET E A R RGL A+L +++ F CL L G LL + L+ Sbjct: 195 ETDAEIASRRGRGL--AMLPAFLWILAFVCLGIAIGVDSSLIGSISLATGLLFVVIALFR 252 Query: 245 LFAPPAKSSLREIHCLRG----TPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQ 300 F P+ ++++ + G TP E + QI+ I V P HW+P+I Sbjct: 253 FFRKPSPDKPQKVNQVSGQICLTPV---AVDEQNNVQISVTLNESIGFVLPEHWRPFIEY 309 Query: 301 DLGQQTDIDIYLDRH-VVRQGRYLSLHDEVKNFPLQHWLRSTIIA-AGSLLVLFMLLFWI 358 + GQ ++ + +D + VV G +SL +EV+ FP +W R +A G+ +LF L + Sbjct: 310 EDGQNQEMAVRVDDYSVVSYGNRMSLDEEVRRFPPVYWGRHLTLALVGATALLFPLASFT 369 Query: 359 PLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNS 418 L L FT + GAQ + + +G + I G G C + T G Sbjct: 370 ELSRDLLFTGQLLSGAQETTPQTPDAVLQQPPAIGAPVSIEGRGQCALNTDG-------- 421 Query: 419 PFLP-FDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSA--SLRSA 475 + P FDC +I W + +P+S+ + + + RQL + ++R SL + Sbjct: 422 -YRPTFDCRRIHWGSS----VPQSQHLEEPEII-----RQLRDRTLLQTRTDGYLSLMAT 471 Query: 476 IQ--------KSGMV-----LLDDFGDIVLKTADLCSAKDDCVRLKNALVNL------GN 516 +Q K M+ L+D ++ SA+ C R+ +++ Sbjct: 472 MQGWDTYRNGKPVMLRHLPELIDTLDSACSQSGTSSSAESQCERIHRHMLSRLIFTLDHQ 531 Query: 517 SKDWDAL--VKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFITHETARAAQSLNSPA 574 + W +L + AG D V + ++L + A+ + + Sbjct: 532 PETWTSLRNAVQTQAGSDDPVTAITSEAHVKALRQRLNQLANELDMERGVNIARDITNSQ 591 Query: 575 PGGFLIVSDEGSDFVDQPWPSASLYD---YPPQEQWNAFQKLAQMLMHTPFNAEGIVTKI 631 GG I V P PS + D P Q +A + PF G+VT Sbjct: 592 QGGVQI------RLVQGPVPSTLMPDDTTSPYQASIDAMTAMIDNAAGQPFKLRGMVTDY 645 Query: 632 FTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQ 691 GT + L R + L LL G +G+ R+++ R R + Sbjct: 646 QVVDGGTAVLSLDLTRHRDNPGNAVLNVLWLLLAAGLLAGHGLMTVIRFKQSRQRSRAVA 705 Query: 692 AYY 694 A Y Sbjct: 706 ALY 708 >UniRef50_C2LEI2 Possible flagellar operon control protein umoB n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LEI2_PROMI Length = 357 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 115/335 (34%), Positives = 184/335 (54%), Gaps = 9/335 (2%) Query: 2 STIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESLT 61 +++I +++ ++A +L R R + A RKLT ++ + +YL Sbjct: 27 LSVIILAIFMISLFIMAAFLFFKRRRLDGSYHLPSLAKPTYRKLTQDDYGVISDYLSYFG 86 Query: 62 QVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLPP 121 G + + + + V L + + R+ S++ N WRYY+D+VE+H+PP Sbjct: 87 TSKFSSGYSLQNFP----EIPTKGEVVTTLRNIVNRFAGSSEGLNHWRYYIDAVEIHIPP 142 Query: 122 FWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYAL----QPVPSTQAS-IRG 176 Y+ EN ++++ T S+P+VI +NGH L++ + +L +P+ S S I+ Sbjct: 143 LLVPYLQQENVLDVVCTPSIPIVIGVNGHFLKDEKSHFSALSLKQLSEPILSNGTSTIQK 202 Query: 177 EESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALL 236 E + LL+IR+ET+EEY L G LI +++ L+ P VF+PW+ Sbjct: 203 NEGDAAHLLHIRQETNEEYRLHHSSGFWNGSLICLGLILWLTALMMPQVFLPWIMAAGGT 262 Query: 237 LLGAGLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQP 296 L GL+ ++ P KS +E+HC +G +RWGLFG D Q+ NISLG IDLVYP HW+P Sbjct: 263 FLVLGLFLIYRPIIKSRKQEVHCFKGRLKRWGLFGNFDHGQVKNISLGGIDLVYPPHWEP 322 Query: 297 YIAQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKN 331 YI D+ + T +++Y + HV++QG YLSLHDE KN Sbjct: 323 YIQNDIDKVTYLEMYPNHHVIKQGPYLSLHDEEKN 357 >UniRef50_UPI0001911667 hypothetical protein Salmonellentericaenterica_06076 n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E98-3139 RepID=UPI0001911667 Length = 325 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 239/281 (85%), Positives = 262/281 (93%) Query: 1 MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESL 60 MSTI+IF+AALLACSLLA W +V+SRR LPW +AF DAQTRKL PEERSAVENYL++L Sbjct: 1 MSTILIFIAALLACSLLAIWRFRVKSRRGSLPWFSAFQDAQTRKLLPEERSAVENYLDNL 60 Query: 61 TQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLP 120 +Q+ QVPGPTGASAAPISL LNAESN+V++LTH+ITRYGI+TDDPNKWRYYLDSVEVHLP Sbjct: 61 SQIQQVPGPTGASAAPISLTLNAESNSVVILTHSITRYGITTDDPNKWRYYLDSVEVHLP 120 Query: 121 PFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYALQPVPSTQASIRGEESE 180 PFWEQYINDEN VELI TD+LPLVISLNGHTLQEYMQE+R YALQ STQASIRGEESE Sbjct: 121 PFWEQYINDENNVELILTDTLPLVISLNGHTLQEYMQESRGYALQNTASTQASIRGEESE 180 Query: 181 QIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGA 240 QIELLNIR+ETHEEYALSRP GLREALLIVASFL+FFFCLITPDVFVPW+ GGA+LLL A Sbjct: 181 QIELLNIRQETHEEYALSRPAGLREALLIVASFLLFFFCLITPDVFVPWMIGGAILLLAA 240 Query: 241 GLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNI 281 GLWGLFAPP+KS+LREIHCLRGTPRRWGLFGEN+QEQINNI Sbjct: 241 GLWGLFAPPSKSALREIHCLRGTPRRWGLFGENNQEQINNI 281 >UniRef50_C0ATY0 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0ATY0_9ENTR Length = 236 Score = 268 bits (684), Expect = 7e-70, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 107/214 (50%), Gaps = 9/214 (4%) Query: 2 STIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESLT 61 +++I +++ ++A +L R R + A RKLT ++ + +YL Sbjct: 27 LSVIILAILMISLFIMAAFLFFKRRRLDGSHHLPSLAKPTYRKLTSDDYGLISDYLSYFG 86 Query: 62 QVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLPP 121 G + + + + V L + + R+ S++ N WRYY+D+VE+H+PP Sbjct: 87 TSDFSSGYSLQNFP----EMPIKGEVVTTLRNIVNRFAGSSEGLNHWRYYIDAVEIHIPP 142 Query: 122 FWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYAL----QPVPSTQAS-IRG 176 Y+ EN ++++ T S+P+V+ +NGH L++ + +L +P+ + +S I+ Sbjct: 143 LLVPYLQQENVLDVVCTPSIPIVVGVNGHFLKDEKIHFSALSLKQRSEPILANGSSTIQK 202 Query: 177 EESEQIELLNIRKETHEEYALSRPRGLREALLIV 210 E + LL IR+ET+EEY L G ALL V Sbjct: 203 NEGDAAHLLQIREETNEEYRLHNSSGFGMALLFV 236 >UniRef50_UPI000190EFBE hypothetical protein Salmonentericaenterica_26402 n=2 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI000190EFBE Length = 131 Score = 201 bits (510), Expect = 9e-50, Method: Composition-based stats. Identities = 108/131 (82%), Positives = 120/131 (91%) Query: 324 SLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVK 383 SLHDEVKNFPLQHWLRST+IA GSLLVLFMLLFWIPLDMP+KFTLSWMKGAQTIEAT+VK Sbjct: 1 SLHDEVKNFPLQHWLRSTVIAIGSLLVLFMLLFWIPLDMPIKFTLSWMKGAQTIEATTVK 60 Query: 384 QLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESEL 443 QL AGVRVGDTL +SG GMCNI + TWS ++NSPF+PFDCSQIIWNDA +LPLPES+L Sbjct: 61 QLEKAGVRVGDTLHLSGKGMCNIHSGATWSGQSNSPFMPFDCSQIIWNDAPALPLPESDL 120 Query: 444 VNKATALTEAV 454 VNKA AL++AV Sbjct: 121 VNKAMALSQAV 131 >UniRef50_C0ATY2 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0ATY2_9ENTR Length = 135 Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 3/132 (2%) Query: 328 EVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLAD 387 + KN+P + ++++ I SL ++ ML + PL + +K + SW+K + T+ +L Sbjct: 2 KKKNYPYKRYIKNIIFVFWSLFIIGMLYLYQPLSLSMKLSFSWLKDTKPHLVTNFTELET 61 Query: 388 AGVRVGDTLRISGTGMCNIRTSGTWSAKTNSP-FLPFDCSQIIWNDARSLPLPESELVNK 446 + VGD ++ G GMC + S+K N F PFDCS I WN++ +P+PES + K Sbjct: 62 TDLHVGDIIQAKGVGMCYMP--PNLSSKNNKTIFAPFDCSGIYWNNSNPMPMPESSTIEK 119 Query: 447 ATALTEAVNRQL 458 + R + Sbjct: 120 SCRFITYGRRAI 131 >UniRef50_UPI000190DBE1 intracellular growth attenuator protein IgaA n=4 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI000190DBE1 Length = 73 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 55/73 (75%), Positives = 64/73 (87%) Query: 614 AQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNG 673 AQ LM TPF+AEGIVT ++TDANGTQHI LH IPD+SG WRYL TTLL+L M+ SA+YNG Sbjct: 1 AQTLMQTPFSAEGIVTSVYTDANGTQHISLHRIPDKSGWWRYLGTTLLMLAMIVSAVYNG 60 Query: 674 VQAWRRYQRHRTR 686 +QA+RRYQRHRTR Sbjct: 61 IQAFRRYQRHRTR 73 >UniRef50_B8L3I2 Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L3I2_9GAMM Length = 367 Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 52/231 (22%), Positives = 85/231 (36%), Gaps = 42/231 (18%) Query: 112 LDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYALQPVPSTQ 171 L + V +P Y++++N E++ + +V+ LNG TL P Sbjct: 90 LGGIPVLVPRQAWPYLSEDNEAEVVLGEREAVVVRLNGFTLAAAR-----------PDAA 138 Query: 172 ASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLA 231 S E R+ET EE AL R GLR + L++A+ ++ P + L Sbjct: 139 TSRVCGE---------RRETPEEVALRRGPGLRPSPLVIAALALWA-ATGVPGLLAMPLL 188 Query: 232 GGALLLLGAGLWGLFAP-------PAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLG 284 A L + GL +P + LR TPR W L G + + Q Sbjct: 189 VIAGLTVWLGLPRRNSPATAQRVLQVRERLRAYQRTAQTPRVW-LLGNDRRVQ------- 240 Query: 285 IIDLVYPAHWQPYIAQDLGQQTDIDIYL-DRHVVRQGRYLSLHDEVKNFPL 334 P W+ G+ +++ D V+ G L + + +P Sbjct: 241 -----LPEEWEHVAGFSSGRSMLLEVRACDGGVLGAGTAWCLASDRRRYPP 286 >UniRef50_Q5XWE0 Putative intracellular growth attenuator protein (Fragment) n=1 Tax=Pectobacterium carotovorum subsp. carotovorum RepID=Q5XWE0_PECCC Length = 70 Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 6/74 (8%) Query: 44 KLTPEERSAVENYL--ESLTQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGIS 101 +LT +ER A+E YL E+ Q + P P SL +SN V +TH ITRYG+S Sbjct: 1 RLTEDERIAIERYLAQENSQQTTPLDIPNAQPKLPRSL----QSNRVYPITHTITRYGLS 56 Query: 102 TDDPNKWRYYLDSV 115 TD NKWRYY+D + Sbjct: 57 TDAQNKWRYYIDKL 70 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q9ACP0 Intracellular growth attenuator protein igaA n=1... 1012 0.0 UniRef50_O86988 Flagellar operon control protein umoB n=5 Tax=En... 971 0.0 UniRef50_B2Q5U8 Putative uncharacterized protein n=2 Tax=Provide... 947 0.0 UniRef50_D1P0D6 Flagellar operon control protein UmoB n=2 Tax=Pr... 920 0.0 UniRef50_D2U385 Flagellar operon control protein (Membrane prote... 907 0.0 UniRef50_B4X424 Putative uncharacterized protein n=1 Tax=Alcaniv... 581 e-164 UniRef50_C2LEI2 Possible flagellar operon control protein umoB n... 468 e-130 UniRef50_UPI0001911667 hypothetical protein Salmonellentericaent... 356 2e-96 UniRef50_C0ATY0 Putative uncharacterized protein n=1 Tax=Proteus... 272 4e-71 UniRef50_UPI000190EFBE hypothetical protein Salmonentericaenteri... 198 5e-49 UniRef50_B8L3I2 Putative uncharacterized protein n=1 Tax=Stenotr... 194 1e-47 UniRef50_C0ATY2 Putative uncharacterized protein n=1 Tax=Proteus... 187 2e-45 UniRef50_UPI000190DBE1 intracellular growth attenuator protein I... 114 1e-23 UniRef50_Q5XWE0 Putative intracellular growth attenuator protein... 77 3e-12 Sequences not found previously or not previously below threshold: UniRef50_B7PZF0 ATP-dependent RNA helicase, putative n=1 Tax=Ixo... 44 0.025 CONVERGED! >UniRef50_Q9ACP0 Intracellular growth attenuator protein igaA n=173 Tax=cellular organisms RepID=IGAA_SALTY Length = 710 Score = 1012 bits (2616), Expect = 0.0, Method: Composition-based stats. Identities = 596/710 (83%), Positives = 655/710 (92%) Query: 1 MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESL 60 MSTI+IF+AALLACSLLA W +V+SRR LPW +AF DAQTRKL PEERSAVENYL++L Sbjct: 1 MSTILIFIAALLACSLLAIWRFRVKSRRGSLPWISAFQDAQTRKLLPEERSAVENYLDNL 60 Query: 61 TQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLP 120 +Q+ QVPGPTGASAAPISL LNAESN+V++LTH+ITRYGI+TDDPNKWRYYLDSVEVHLP Sbjct: 61 SQIQQVPGPTGASAAPISLTLNAESNSVVILTHSITRYGITTDDPNKWRYYLDSVEVHLP 120 Query: 121 PFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYALQPVPSTQASIRGEESE 180 PFWEQYINDEN VELI TD+LPLVISLNGHTLQEYMQE+R YALQ STQASIRGEESE Sbjct: 121 PFWEQYINDENNVELILTDTLPLVISLNGHTLQEYMQESRGYALQNTASTQASIRGEESE 180 Query: 181 QIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGA 240 QIELLNIR+ETHEEYALSRP GLREALLIVASFL+FFFCLITPDVFVPW+ GGA+LLL A Sbjct: 181 QIELLNIRQETHEEYALSRPAGLREALLIVASFLLFFFCLITPDVFVPWMIGGAILLLAA 240 Query: 241 GLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQ 300 GLWGLFAPP+KS+LREIHCLRGTPRRWGLFGEN+QEQINNISLGIIDL+YPAHWQPYI Q Sbjct: 241 GLWGLFAPPSKSALREIHCLRGTPRRWGLFGENNQEQINNISLGIIDLIYPAHWQPYITQ 300 Query: 301 DLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPL 360 DLGQQTDIDIYLDRHV RQGR+LSLHDEVKNFPLQHWLRST+IA GSLLVLFMLLFWIPL Sbjct: 301 DLGQQTDIDIYLDRHVARQGRFLSLHDEVKNFPLQHWLRSTVIAIGSLLVLFMLLFWIPL 360 Query: 361 DMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNSPF 420 DMP+KFTLSWMKGAQTIEAT+VKQL AGVRVGDTL +SG GMCNI + TWS ++NSPF Sbjct: 361 DMPIKFTLSWMKGAQTIEATTVKQLEKAGVRVGDTLHLSGKGMCNIHSGATWSGQSNSPF 420 Query: 421 LPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQKSG 480 +PFDCSQIIWNDA +LPLPES+LVNKA AL++AVNRQLHPKPED+SRVSASLRSAIQKSG Sbjct: 421 MPFDCSQIIWNDAPALPLPESDLVNKAMALSQAVNRQLHPKPEDDSRVSASLRSAIQKSG 480 Query: 481 MVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVLLR 540 MVLLDDFGDIVLKTADLC+A+D+CVRLKNALVNLGNSKDW+ALVKRANAGKLDGVNVLLR Sbjct: 481 MVLLDDFGDIVLKTADLCAAEDECVRLKNALVNLGNSKDWNALVKRANAGKLDGVNVLLR 540 Query: 541 PVSAESLDNLVATSTAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYD 600 PVSAESL+NLV TSTAPFI+ ETARAAQSLNSPAPGGFLI SDEGS+ VDQ WPS LYD Sbjct: 541 PVSAESLENLVTTSTAPFISRETARAAQSLNSPAPGGFLIASDEGSELVDQTWPSTPLYD 600 Query: 601 YPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTL 660 YP QEQW+AFQ+LAQ LM TPF+AEGIVT ++TDANGTQHI LH IPD+SG WRYL TTL Sbjct: 601 YPAQEQWSAFQRLAQTLMQTPFSAEGIVTSVYTDANGTQHISLHRIPDKSGWWRYLGTTL 660 Query: 661 LLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCLNPQLITPSESLI 710 L+L M+ SA+YNG+QA+RRYQRHRTRM +IQ YYESCLNP+L E+LI Sbjct: 661 LMLAMIVSAVYNGIQAFRRYQRHRTRMADIQEYYESCLNPRLTVSPENLI 710 >UniRef50_O86988 Flagellar operon control protein umoB n=5 Tax=Enterobacteriaceae RepID=UMOB_PROMI Length = 702 Score = 971 bits (2511), Expect = 0.0, Method: Composition-based stats. Identities = 279/703 (39%), Positives = 410/703 (58%), Gaps = 14/703 (1%) Query: 2 STIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESLT 61 +++I +++ ++A +L R R + A RKLT ++ + +YL Sbjct: 3 LSVIILAIFMISLFIMAAFLFFKRRRLDGSYHLPSLAKPTYRKLTQDDYGVISDYLSYFG 62 Query: 62 QVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLPP 121 G + + + + V L + + R+ S++ N WRYY+D+VE+H+PP Sbjct: 63 TSKFSAGYSLQNFP----EIPTKGEVVTTLRNIVNRFAGSSEGINHWRYYIDAVEIHIPP 118 Query: 122 FWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYAL----QPVPSTQAS-IRG 176 Y+ EN ++++ T S+P+VI +NGH L++ + +L +P+ S S I+ Sbjct: 119 LLVPYLQQENVLDVVCTPSIPIVIGVNGHFLKDEKSHFSALSLKQLSEPILSNGTSTIQK 178 Query: 177 EESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALL 236 E + LL+IR+ET+EEY L G LI +++ L+ P VF+PW+ Sbjct: 179 NEGDAAHLLHIRQETNEEYRLHHSSGFWNGSLICLGLILWLTALMMPQVFLPWIMAAGGT 238 Query: 237 LLGAGLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQP 296 L GL+ ++ P KS +E+HC +G +RWGLFG D Q+ NISLG IDLVYP HW+P Sbjct: 239 FLVLGLFLIYRPIIKSRKQEVHCFKGRLKRWGLFGNFDHGQVKNISLGGIDLVYPPHWEP 298 Query: 297 YIAQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLF 356 YI D+ + T +++Y + HV++QG YLSLHDE KN+P + ++++ I SL ++ ML Sbjct: 299 YIQNDIDKVTYLEMYPNHHVIKQGPYLSLHDEEKNYPYKRYIKNIIFVVCSLFIIGMLYL 358 Query: 357 WIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKT 416 + PL + +K T SW+K ++ T+ +L A + VGD ++ G GMC + S+K Sbjct: 359 YQPLSLSMKLTFSWIKESEPHLVTNFTELETAKLHVGDIIQAKGVGMCYMP--PNLSSKN 416 Query: 417 NSP-FLPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSA 475 N F PFDCS I WN++ +P+PES + KA AL V QLHP +RV+ SL A Sbjct: 417 NKTIFAPFDCSGIYWNNSNPMPMPESSTIEKAAALLYLVEEQLHPV--SNNRVNPSLGQA 474 Query: 476 IQKSGMVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGV 535 I KSGM LLD+F I+LKT DLC +++C+RLK ALVNL N DW +LV+RA +GKL G Sbjct: 475 ITKSGMNLLDNFDGIILKTQDLCPRENECIRLKMALVNLSNVNDWPSLVQRAESGKLTGT 534 Query: 536 NVLLRPVSAESLDNLVATSTAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPS 595 NVLLR VSAE+L+ LV T+T+ FI E +AA LNSP PGG L++SDE VD + Sbjct: 535 NVLLRAVSAEALEKLVDTTTSSFIYREIDKAAILLNSPPPGGVLLISDERKQLVDYASNT 594 Query: 596 ASLYDYPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRY 655 S+++ P EQW Q+L+ +L+HTPFN G++T + DANGT I LH +PD L Y Sbjct: 595 NSVFEPTPLEQWRELQRLSDILLHTPFNTGGVITGMVIDANGTLQIFLHSMPDSMTLLYY 654 Query: 656 LSTTLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCL 698 + TLLL +G I N RR +++ RM +I YYE C Sbjct: 655 IGNTLLLFFAIGFLILNLFFIIRRRRQNNQRMHKISQYYEHCF 697 >UniRef50_B2Q5U8 Putative uncharacterized protein n=2 Tax=Providencia RepID=B2Q5U8_PROST Length = 697 Score = 947 bits (2447), Expect = 0.0, Method: Composition-based stats. Identities = 252/705 (35%), Positives = 402/705 (57%), Gaps = 18/705 (2%) Query: 1 MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESL 60 ++ ++I +++ +++A +L R R + + A+ RK+ + + YL + Sbjct: 2 LTYVIIMAIFIISLTIMASFLYFRRGRNSGVYQIPSQAEPSYRKMIDNDYQIISQYLRT- 60 Query: 61 TQVLQVPGPT-GASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHL 119 P P+ A P L NA + + +++TR+ + + N WRY++D++EV L Sbjct: 61 -----NPFPSQSAEQTPWQLKKNA---VIATVCNSVTRFNLRQEQANSWRYFIDTIEVKL 112 Query: 120 PPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYALQPVPSTQASIRGEES 179 P E Y+ +N +EL+ T+ LPL+ISLN +L+++ E S +Q + + +A+I Sbjct: 113 PHQLEPYLQQKNVMELVETNHLPLIISLNNFSLKDFNYEWTSDDIQEIVTPEAAIHERGE 172 Query: 180 EQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLG 239 +++L +RKET EE+ L+ G LLI SFL+ + LI W GA Sbjct: 173 PNVQVLRVRKETIEEHRLNHSSGWLGTLLICLSFLLGYLALIAIPFLQSWGFVGAFFCFV 232 Query: 240 AGLWGLFAPPA-KSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYI 298 AGL LF L+++ C+ G P+RW L+GE D+ Q + +S+G IDL YP+HW+PYI Sbjct: 233 AGLLALFRLRVFPKKLQDVQCVFGQPKRWELYGELDKRQSSTVSIGGIDLYYPSHWEPYI 292 Query: 299 AQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWI 358 +L + T ID+Y V+R G++LSLH+E + +P + + ++ +I A LLVLF++ + Sbjct: 293 HHELNKATQIDMYPSGQVLRHGQFLSLHEEERYYPYRRYKKNLLILATGLLVLFLMFSYQ 352 Query: 359 PLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNS 418 + +P+K +W++GA+ I+ +V +L ++VGD+L G GMC S ++ Sbjct: 353 SMCLPIKLGFAWLEGAEKIKVMNVAELETRKLKVGDSLSAKGVGMCY--RPPNLSDTNHA 410 Query: 419 PFLPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQK 478 F PFDCS + WN+ P PESE++ +A L V +QLHP+ ++ V+ L+ I K Sbjct: 411 QFAPFDCSGVYWNNMNLTPDPESEVIERAIRLLNTVQKQLHPE-KNSVGVNPRLQRDIMK 469 Query: 479 SGMVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVL 538 SGM ++ DF +I+LKT +LC + C +LK+AL NLG++ DW LV +A+ GKL G +VL Sbjct: 470 SGMNIIFDFSEIILKTNELCYQEHACSKLKSALTNLGSTDDWGTLVVKASTGKLSGAHVL 529 Query: 539 LRPVSAESLDNLVATSTAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASL 598 LR SAE+L+ LV +T FI E + A LNSP PGG L++SDE VD S Sbjct: 530 LRAGSAEALEKLVEVTTYEFIKVEVEKEAAKLNSPPPGGVLLISDENKALVDFIVGST-F 588 Query: 599 YDYPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLST 658 D P ++W +++A +L++TPF+ EGI+T + TDANGT HI LH PD L +Y+ + Sbjct: 589 NDMTPLQRWVELKRIAGLLINTPFDVEGIITDLSTDANGTLHITLHSKPDEKVLSQYVIS 648 Query: 659 TLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCL---NP 700 +L L + + NG R ++ R+ I+ YY+ C NP Sbjct: 649 SLFTLFLGIGVLLNGTLVIFRIMNNKKRLRNIKRYYDKCFEADNP 693 >UniRef50_D1P0D6 Flagellar operon control protein UmoB n=2 Tax=Providencia RepID=D1P0D6_9ENTR Length = 699 Score = 920 bits (2377), Expect = 0.0, Method: Composition-based stats. Identities = 234/706 (33%), Positives = 393/706 (55%), Gaps = 18/706 (2%) Query: 1 MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYL-ES 59 ++TI+I + + ++ +L R RR + + A +K+ + + YL + Sbjct: 2 LNTIIILALIVASLIIMVLFLFFRRGRRSSVYQIPSLAAPSFKKMIESDYQILSQYLNHN 61 Query: 60 LTQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHL 119 ++ + VP S+ V + +A+TR+ + + N WRY++D+VEV L Sbjct: 62 ASKNIHVPSQPAWQIKRNSI--------VATICNAVTRFNLRQEQGNSWRYFIDTVEVQL 113 Query: 120 PPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYALQPVPSTQASIRGEES 179 P E ++ +N +E+I TD LPL+++LN H+L+E+ E + + +A+I+ E Sbjct: 114 PEQLEPFLQRQNVMEIIDTDHLPLIVALNSHSLKEFSHEWSASSSVESVLPEAAIQEGEQ 173 Query: 180 EQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLG 239 I+LL +RKE+ EE+ L G A+++ SF + + +I+ V W A+++ Sbjct: 174 NTIQLLKVRKESKEEHRLHNSSGWLGAIVVSLSFFLGYLTMISIPVLQGWGLTFAIIVFC 233 Query: 240 AGLWGLFAPPA-KSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYI 298 G++ LF +++ C+ G P+RW L+GE D++ + +S+G +DL YP++W PY+ Sbjct: 234 IGVFLLFRLRILPKPYQDVQCIYGQPKRWELYGELDKKYSSTVSIGGVDLHYPSYWTPYL 293 Query: 299 AQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWI 358 +L Q T+ID+Y VV+ GR LS+H+E + +P + + ++ ++ + +LL L + + + Sbjct: 294 KYELNQATNIDLYSSGEVVKYGRCLSIHEEERYYPYKRFKKNILMFSSALLFLVLTMTYQ 353 Query: 359 PLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNS 418 P+ +P+K ++W++G + T +L+ ++VGDTL G GMC + + + Sbjct: 354 PISLPIKLGIAWLEGTHKVVVTDPMELSIKKIKVGDTLLAKGVGMCY--RPPNLNDENQA 411 Query: 419 PFLPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQK 478 F+PFDCS + WN+ + P+SE VN A L +V QLHP +D ++ L+ I K Sbjct: 412 LFVPFDCSGMYWNNINLVTEPQSETVNHAIDLLNSVKNQLHPD-KDAPGINPRLQREIMK 470 Query: 479 SGMVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNS-KDWDALVKRANAGKLDGVNV 537 SGM ++ DF +I+LKT LC + CV+LKNAL NLG S DW LVK+A++GKL G +V Sbjct: 471 SGMNIIFDFSEIILKTNALCGGSESCVKLKNALSNLGGSADDWSTLVKKASSGKLSGAHV 530 Query: 538 LLRPVSAESLDNLVATSTAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSAS 597 LLR SAE+L+ LV +T FI E + + LNSP PGG L++SDE VD P S Sbjct: 531 LLRAGSAEALEKLVEDTTYDFIRKEIEKEIRKLNSPPPGGVLLISDENHPLVDL-IPINS 589 Query: 598 LYDYPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLS 657 + ++W Q+LA +L +TPF+ +G+VT + DANGT +I LH + L ++ Sbjct: 590 FNEMTQLQRWYELQRLASILNNTPFDVQGVVTNLSVDANGTLYISLHEALNEDALPLFVC 649 Query: 658 TTLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCL---NP 700 + +L + + NG R ++ R+ +I YY+ C NP Sbjct: 650 RAMFILFLAICVVINGSLIIIRVLNNKRRLRKITEYYDKCYEVDNP 695 >UniRef50_D2U385 Flagellar operon control protein (Membrane protein) n=1 Tax=Arsenophonus nasoniae RepID=D2U385_9ENTR Length = 728 Score = 907 bits (2344), Expect = 0.0, Method: Composition-based stats. Identities = 252/672 (37%), Positives = 385/672 (57%), Gaps = 9/672 (1%) Query: 34 TNAFADAQTRKLTPEERSAVENYLESLTQVLQVPGPTGASAAPISLALNAESNNVMMLTH 93 A RK+T +E + +YL+ T Q+ T + V + Sbjct: 49 LPFLIHANYRKITSDEYQIICDYLKY-TNSEQILIKTKEVTIRKLFDFPKRNAWVSTGCN 107 Query: 94 AITRYGISTDDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQ 153 AITR+ + + N WRY++DS EVHLP E Y+ +N +++++TD+LPLVIS+N H L Sbjct: 108 AITRFSLINEQDNLWRYFIDSKEVHLPRQLEPYLTTQNVMDVVYTDTLPLVISVNNHFLA 167 Query: 154 EYMQETRSYALQ---PVPSTQASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIV 210 ++ Q+ + + P A I+ + ++ + +RKET EEY L+R L + +I Sbjct: 168 DFKQDFKQFHFAREITFPPVNALIQESGQQLVKFIKVRKETLEEYKLNRSFSLWGSGVIC 227 Query: 211 ASFLMFFFCLITPDVFVPWLAGGALLLLGAGLWGLFAPPA--KSSLREIHCLRGTPRRWG 268 ++ L +F PWL L G++ L+ P K ++I C+ G P+R G Sbjct: 228 VGLIVCALSLFVIAIFFPWLMLFGGLTFFVGVYLLYRPYIFRKRYQQDIRCVVGKPKRLG 287 Query: 269 LFGENDQEQINNISLGIIDLVYPAHWQPYIAQDLGQQTDIDIYLDRHVVRQGRYLSLHDE 328 LFGE D+ + +NISL IDL+YP+HW+P++ ++ Q +ID+Y + +VVRQGRYLSLH+E Sbjct: 288 LFGEFDKGKKHNISLAGIDLIYPSHWEPFLEYEIDQAINIDMYANGYVVRQGRYLSLHEE 347 Query: 329 VKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADA 388 + +P + + ++ ++ S ++ +L F+ P+ +P + W+ G T+ +L Sbjct: 348 ARRYPYKRYGKNLMLMITSFFLMLLLHFYEPVHLPARLIFHWLNGENYRHTTNYTELEVM 407 Query: 389 GVRVGDTLRISGTGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKAT 448 ++VGD + + G GMC + FLPFDCS I WN+ P+PES++V K Sbjct: 408 PLQVGDYIAVKGVGMCYVPID-LIEKGNRFDFLPFDCSGIYWNNISPSPIPESDIVEKVF 466 Query: 449 ALTEAVNRQLHPKPEDESRVSASLRSAIQKSGMVLLDDFGDIVLKTADLCSAKDDCVRLK 508 +L+ V +QL+ D +V+ LR I KSGM LLD+F DI+LKT LC ++C RLK Sbjct: 467 SLSTTVKQQLYFNNLDH-KVNQQLRREIMKSGMNLLDNFSDIILKTNSLCPLNNECFRLK 525 Query: 509 NALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFITHETARAAQ 568 +ALVNL ++ +W LV RA GKL G+NV+LRP AE+L+ LV +T+ +I E +AA Sbjct: 526 SALVNLSDTYEWSVLVARAKNGKLAGINVILRPGGAETLEKLVNETTSFYINREIEKAAA 585 Query: 569 SLNSPAPGGFLIVSDEGSDFVDQ-PWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNAEGI 627 LNSP P G L++S+EG FVD + S + Y P ++W QKL+ +LMHTPF A+GI Sbjct: 586 LLNSPLPRGVLLISEEGKQFVDLVSFHSPVIDSYTPLQKWQELQKLSDILMHTPFEAKGI 645 Query: 628 VTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQRHRTRM 687 +TK+F DA GT+HI LH P L RY+S LL L ++ + I N + R + ++ R+ Sbjct: 646 ITKLFVDAKGTRHIILHSKPSSMLLLRYISAFLLNLVLMATFILNFILVITRKRINKWRL 705 Query: 688 MEIQAYYESCLN 699 I+ YYE C N Sbjct: 706 KSIRQYYEHCFN 717 >UniRef50_B4X424 Putative uncharacterized protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X424_9GAMM Length = 709 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 151/663 (22%), Positives = 255/663 (38%), Gaps = 82/663 (12%) Query: 85 SNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLV 144 N V L+ R+G++T+ W + VEV LP E ++ + N ++ + +V Sbjct: 75 GNAVFALSGPYLRHGLTTNGNTVWHDTIGGVEVLLPYDAEYFLREHNDALVVLAEKKAIV 134 Query: 145 ISLN------GHTLQEYMQETRSYALQPVPSTQASIRGEESEQ---------IELLNIRK 189 ++LN G + +E + + + + EE EQ + + R Sbjct: 135 VALNDDFTLAGGEERNQRREQKQQQWESGDHGELARVVEEDEQTREDDPAGTLRIREQRD 194 Query: 190 ETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGG-----ALLLLGAGLWG 244 ET E A R RGL A+L +++ F CL L G LL + L+ Sbjct: 195 ETDAEIASRRGRGL--AMLPAFLWILAFVCLGIAIGVDSSLIGSISLATGLLFVVIALFR 252 Query: 245 LFAPPAKSSLREIHCLRG----TPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQ 300 F P+ ++++ + G TP E + QI+ I V P HW+P+I Sbjct: 253 FFRKPSPDKPQKVNQVSGQICLTPV---AVDEQNNVQISVTLNESIGFVLPEHWRPFIEY 309 Query: 301 DLGQQTDIDIYLDRH-VVRQGRYLSLHDEVKNFPLQHWLRSTIIA-AGSLLVLFMLLFWI 358 + GQ ++ + +D + VV G +SL +EV+ FP +W R +A G+ +LF L + Sbjct: 310 EDGQNQEMAVRVDDYSVVSYGNRMSLDEEVRRFPPVYWGRHLTLALVGATALLFPLASFT 369 Query: 359 PLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNS 418 L L FT + GAQ + + +G + I G G C + T G Sbjct: 370 ELSRDLLFTGQLLSGAQETTPQTPDAVLQQPPAIGAPVSIEGRGQCALNTDG-------- 421 Query: 419 PFLP-FDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSA--SLRSA 475 + P FDC +I W + +P+S+ + + + RQL + ++R SL + Sbjct: 422 -YRPTFDCRRIHWGSS----VPQSQHLEEPEII-----RQLRDRTLLQTRTDGYLSLMAT 471 Query: 476 IQ--------KSGMV-----LLDDFGDIVLKTADLCSAKDDCVRLKNALVNL------GN 516 +Q K M+ L+D ++ SA+ C R+ +++ Sbjct: 472 MQGWDTYRNGKPVMLRHLPELIDTLDSACSQSGTSSSAESQCERIHRHMLSRLIFTLDHQ 531 Query: 517 SKDWDAL--VKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFITHETARAAQSLNSPA 574 + W +L + AG D V + ++L + A+ + + Sbjct: 532 PETWTSLRNAVQTQAGSDDPVTAITSEAHVKALRQRLNQLANELDMERGVNIARDITNSQ 591 Query: 575 PGGFLIVSDEGSDFVDQPWPSASLYD---YPPQEQWNAFQKLAQMLMHTPFNAEGIVTKI 631 GG I V P PS + D P Q +A + PF G+VT Sbjct: 592 QGGVQI------RLVQGPVPSTLMPDDTTSPYQASIDAMTAMIDNAAGQPFKLRGMVTDY 645 Query: 632 FTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQ 691 GT + L R + L LL G +G+ R+++ R R + Sbjct: 646 QVVDGGTAVLSLDLTRHRDNPGNAVLNVLWLLLAAGLLAGHGLMTVIRFKQSRQRSRAVA 705 Query: 692 AYY 694 A Y Sbjct: 706 ALY 708 >UniRef50_C2LEI2 Possible flagellar operon control protein umoB n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LEI2_PROMI Length = 357 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 115/335 (34%), Positives = 184/335 (54%), Gaps = 9/335 (2%) Query: 2 STIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESLT 61 +++I +++ ++A +L R R + A RKLT ++ + +YL Sbjct: 27 LSVIILAIFMISLFIMAAFLFFKRRRLDGSYHLPSLAKPTYRKLTQDDYGVISDYLSYFG 86 Query: 62 QVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLPP 121 G + + + + V L + + R+ S++ N WRYY+D+VE+H+PP Sbjct: 87 TSKFSSGYSLQNFP----EIPTKGEVVTTLRNIVNRFAGSSEGLNHWRYYIDAVEIHIPP 142 Query: 122 FWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYAL----QPVPSTQAS-IRG 176 Y+ EN ++++ T S+P+VI +NGH L++ + +L +P+ S S I+ Sbjct: 143 LLVPYLQQENVLDVVCTPSIPIVIGVNGHFLKDEKSHFSALSLKQLSEPILSNGTSTIQK 202 Query: 177 EESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALL 236 E + LL+IR+ET+EEY L G LI +++ L+ P VF+PW+ Sbjct: 203 NEGDAAHLLHIRQETNEEYRLHHSSGFWNGSLICLGLILWLTALMMPQVFLPWIMAAGGT 262 Query: 237 LLGAGLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQP 296 L GL+ ++ P KS +E+HC +G +RWGLFG D Q+ NISLG IDLVYP HW+P Sbjct: 263 FLVLGLFLIYRPIIKSRKQEVHCFKGRLKRWGLFGNFDHGQVKNISLGGIDLVYPPHWEP 322 Query: 297 YIAQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKN 331 YI D+ + T +++Y + HV++QG YLSLHDE KN Sbjct: 323 YIQNDIDKVTYLEMYPNHHVIKQGPYLSLHDEEKN 357 >UniRef50_UPI0001911667 hypothetical protein Salmonellentericaenterica_06076 n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E98-3139 RepID=UPI0001911667 Length = 325 Score = 356 bits (914), Expect = 2e-96, Method: Composition-based stats. Identities = 239/281 (85%), Positives = 262/281 (93%) Query: 1 MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESL 60 MSTI+IF+AALLACSLLA W +V+SRR LPW +AF DAQTRKL PEERSAVENYL++L Sbjct: 1 MSTILIFIAALLACSLLAIWRFRVKSRRGSLPWFSAFQDAQTRKLLPEERSAVENYLDNL 60 Query: 61 TQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLP 120 +Q+ QVPGPTGASAAPISL LNAESN+V++LTH+ITRYGI+TDDPNKWRYYLDSVEVHLP Sbjct: 61 SQIQQVPGPTGASAAPISLTLNAESNSVVILTHSITRYGITTDDPNKWRYYLDSVEVHLP 120 Query: 121 PFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYALQPVPSTQASIRGEESE 180 PFWEQYINDEN VELI TD+LPLVISLNGHTLQEYMQE+R YALQ STQASIRGEESE Sbjct: 121 PFWEQYINDENNVELILTDTLPLVISLNGHTLQEYMQESRGYALQNTASTQASIRGEESE 180 Query: 181 QIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGA 240 QIELLNIR+ETHEEYALSRP GLREALLIVASFL+FFFCLITPDVFVPW+ GGA+LLL A Sbjct: 181 QIELLNIRQETHEEYALSRPAGLREALLIVASFLLFFFCLITPDVFVPWMIGGAILLLAA 240 Query: 241 GLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNI 281 GLWGLFAPP+KS+LREIHCLRGTPRRWGLFGEN+QEQINNI Sbjct: 241 GLWGLFAPPSKSALREIHCLRGTPRRWGLFGENNQEQINNI 281 >UniRef50_C0ATY0 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0ATY0_9ENTR Length = 236 Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 107/214 (50%), Gaps = 9/214 (4%) Query: 2 STIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESLT 61 +++I +++ ++A +L R R + A RKLT ++ + +YL Sbjct: 27 LSVIILAILMISLFIMAAFLFFKRRRLDGSHHLPSLAKPTYRKLTSDDYGLISDYLSYFG 86 Query: 62 QVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLPP 121 G + + + + V L + + R+ S++ N WRYY+D+VE+H+PP Sbjct: 87 TSDFSSGYSLQNFP----EMPIKGEVVTTLRNIVNRFAGSSEGLNHWRYYIDAVEIHIPP 142 Query: 122 FWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYAL----QPVPSTQAS-IRG 176 Y+ EN ++++ T S+P+V+ +NGH L++ + +L +P+ + +S I+ Sbjct: 143 LLVPYLQQENVLDVVCTPSIPIVVGVNGHFLKDEKIHFSALSLKQRSEPILANGSSTIQK 202 Query: 177 EESEQIELLNIRKETHEEYALSRPRGLREALLIV 210 E + LL IR+ET+EEY L G ALL V Sbjct: 203 NEGDAAHLLQIREETNEEYRLHNSSGFGMALLFV 236 >UniRef50_UPI000190EFBE hypothetical protein Salmonentericaenterica_26402 n=2 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI000190EFBE Length = 131 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 108/131 (82%), Positives = 120/131 (91%) Query: 324 SLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVK 383 SLHDEVKNFPLQHWLRST+IA GSLLVLFMLLFWIPLDMP+KFTLSWMKGAQTIEAT+VK Sbjct: 1 SLHDEVKNFPLQHWLRSTVIAIGSLLVLFMLLFWIPLDMPIKFTLSWMKGAQTIEATTVK 60 Query: 384 QLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESEL 443 QL AGVRVGDTL +SG GMCNI + TWS ++NSPF+PFDCSQIIWNDA +LPLPES+L Sbjct: 61 QLEKAGVRVGDTLHLSGKGMCNIHSGATWSGQSNSPFMPFDCSQIIWNDAPALPLPESDL 120 Query: 444 VNKATALTEAV 454 VNKA AL++AV Sbjct: 121 VNKAMALSQAV 131 >UniRef50_B8L3I2 Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L3I2_9GAMM Length = 367 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 52/231 (22%), Positives = 85/231 (36%), Gaps = 42/231 (18%) Query: 112 LDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYALQPVPSTQ 171 L + V +P Y++++N E++ + +V+ LNG TL P Sbjct: 90 LGGIPVLVPRQAWPYLSEDNEAEVVLGEREAVVVRLNGFTLAAAR-----------PDAA 138 Query: 172 ASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLA 231 S E R+ET EE AL R GLR + L++A+ ++ P + L Sbjct: 139 TSRVCGE---------RRETPEEVALRRGPGLRPSPLVIAALALWA-ATGVPGLLAMPLL 188 Query: 232 GGALLLLGAGLWGLFAP-------PAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLG 284 A L + GL +P + LR TPR W L G + + Q Sbjct: 189 VIAGLTVWLGLPRRNSPATAQRVLQVRERLRAYQRTAQTPRVW-LLGNDRRVQ------- 240 Query: 285 IIDLVYPAHWQPYIAQDLGQQTDIDIYL-DRHVVRQGRYLSLHDEVKNFPL 334 P W+ G+ +++ D V+ G L + + +P Sbjct: 241 -----LPEEWEHVAGFSSGRSMLLEVRACDGGVLGAGTAWCLASDRRRYPP 286 >UniRef50_C0ATY2 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0ATY2_9ENTR Length = 135 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 3/132 (2%) Query: 328 EVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLAD 387 + KN+P + ++++ I SL ++ ML + PL + +K + SW+K + T+ +L Sbjct: 2 KKKNYPYKRYIKNIIFVFWSLFIIGMLYLYQPLSLSMKLSFSWLKDTKPHLVTNFTELET 61 Query: 388 AGVRVGDTLRISGTGMCNIRTSGTWSAKTNSP-FLPFDCSQIIWNDARSLPLPESELVNK 446 + VGD ++ G GMC + S+K N F PFDCS I WN++ +P+PES + K Sbjct: 62 TDLHVGDIIQAKGVGMCYMP--PNLSSKNNKTIFAPFDCSGIYWNNSNPMPMPESSTIEK 119 Query: 447 ATALTEAVNRQL 458 + R + Sbjct: 120 SCRFITYGRRAI 131 >UniRef50_UPI000190DBE1 intracellular growth attenuator protein IgaA n=4 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI000190DBE1 Length = 73 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 55/73 (75%), Positives = 64/73 (87%) Query: 614 AQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNG 673 AQ LM TPF+AEGIVT ++TDANGTQHI LH IPD+SG WRYL TTLL+L M+ SA+YNG Sbjct: 1 AQTLMQTPFSAEGIVTSVYTDANGTQHISLHRIPDKSGWWRYLGTTLLMLAMIVSAVYNG 60 Query: 674 VQAWRRYQRHRTR 686 +QA+RRYQRHRTR Sbjct: 61 IQAFRRYQRHRTR 73 >UniRef50_Q5XWE0 Putative intracellular growth attenuator protein (Fragment) n=1 Tax=Pectobacterium carotovorum subsp. carotovorum RepID=Q5XWE0_PECCC Length = 70 Score = 76.7 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 6/74 (8%) Query: 44 KLTPEERSAVENYL--ESLTQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGIS 101 +LT +ER A+E YL E+ Q + P P SL +SN V +TH ITRYG+S Sbjct: 1 RLTEDERIAIERYLAQENSQQTTPLDIPNAQPKLPRSL----QSNRVYPITHTITRYGLS 56 Query: 102 TDDPNKWRYYLDSV 115 TD NKWRYY+D + Sbjct: 57 TDAQNKWRYYIDKL 70 >UniRef50_B7PZF0 ATP-dependent RNA helicase, putative n=1 Tax=Ixodes scapularis RepID=B7PZF0_IXOSC Length = 1095 Score = 43.6 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 10/118 (8%) Query: 494 TADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVAT 553 + ++K + L L +LG + + K+ KL+ V +RP AE L + Sbjct: 207 SNKQIASKSCALSLVRQLFHLGAIDAYTGVTKKKTESKLEPYEVTVRPEIAEELQATIDA 266 Query: 554 STAPFITH---ETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPPQEQWN 608 +T E + SL P EG V QP P + PPQ WN Sbjct: 267 LNLEVVTVPQGEVPQEPFSLRVPR-------HLEGEQVVSQPVPGGVVPWSPPQPNWN 317 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.129 0.332 Lambda K H 0.267 0.0393 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,509,954,368 Number of Sequences: 3077464 Number of extensions: 124716827 Number of successful extensions: 446925 Number of sequences better than 1.0e-01: 15 Number of HSP's better than 0.1 without gapping: 39 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 446754 Number of HSP's gapped (non-prelim): 46 length of query: 711 length of database: 1,040,396,356 effective HSP length: 136 effective length of query: 575 effective length of database: 621,861,252 effective search space: 357570219900 effective search space used: 357570219900 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 97 (42.0 bits)