17 c1xrfA_ Probab=100.00  E-value=3.1e-40  Score=311.18  Aligned_columns=359  Identities=24%

Q ss_pred             CCEEEECCEEECCCC--CEEEEEEEECCEEEEECCCCCCCCCCEEEECCCCEEECCEECCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             956898689988886--174208998999999617888778876998869988425060321785877666684469999
Q batch____         1 MRVLIKNGTVVNADG--QAKQDLLIESGIVRQLGNNISPQLPYEEIDATGCYVFPGGVDVHTHFNIDVGIARSCDDFFTG   78 (461)
Q Consensus         1 Md~ii~n~~I~~~~~--~~~~~I~I~dG~I~~Vg~~~~~~~~~~vID~~G~~v~PGfID~H~H~~~~~~~~~~~~~~~~~   78 (461)
                      ||+||+|++|+|+++  .++++|+|+||||++||++.+.+ ++++||++|++|+|||||+|+|+.......  .......
T Consensus         3 ~~~li~n~~i~~~~~~~~~~~~I~Ie~g~I~~vg~~~~~~-~~~viD~~G~~i~PGlID~H~H~~~~~~~~--~~~~~~~   79 (363)
T c1xrfA_           3 LKLIVKNGYVIDPSQNLEGEFDILVENGKIKKIDKNILVP-EAEIIDAKGLIVCPGFIDIHVHLRDPGQTY--KEDIESG   79 (363)
T ss_dssp             CEEEEESCEEEEGGGTEEEECEEEEETTEEEEEESSCCCS-SEEEEECTTCEEEECEEEEEECCCTTTCTT--TCCHHHH
T ss_pred             CCEEEECCEEECCCCCEEECEEEEEECCEEEEEECCCCCC-CCEEEECCCCEEECCEECCCCCCCCCCCCC--CCCHHHH
T ss_conf             1069943389988998700201899899999960789888-867998879988525260522686877755--3444889


Q ss_pred             HHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf             99999849748863788786425699999999974065530220133556789988999999987427642775026644
Q batch____        79 TRAAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAHKAVIDYSFHGVIQHINHAILDEIPMIVEEGLSSFKLYLTYQY  158 (461)
Q Consensus        79 ~~~~~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  158 (461)
                      .+.+...|+|++.......+.....................................++.+......+.....  .....
T Consensus        80 ~~~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  157 (363)
T c1xrfA_          80 SRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVLPTGTITKGRKGKEIADFYSLKEAGCVAFT--DDGSP  157 (363)
T ss_dssp             HHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECBCSBGGGCSSSBCCHHHHHHHTCCCBC--CTTSC
T ss_pred             HHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCEEECC--CCCCC
T ss_conf             9987524840796237777656748999999986332486357025466867544779998843422157605--67653


Q ss_pred             CCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             58988999999999864986999158805689999999742674100056667455689999999999997288717886
Q batch____       159 KLNDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAEAIARMINLAQIAGNAPLYIV  238 (461)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (461)
                      ..+...+.+..+.+...+.++..|+................                                 ..++..
T Consensus       158 ~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~---------------------------------~~~~~~  204 (363)
T c1xrfA_         158 VMDSSVMRKALELASQLGVPIMDHAEEIQIARDGILAQRTG---------------------------------GHVHIQ  204 (363)
T ss_dssp             CCCHHHHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHHHHC---------------------------------CCEEEC
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHC---------------------------------CEEEEE
T ss_conf             28899999999999871987999417715789998742107---------------------------------527886


Q ss_pred             ECCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHCCCEEEECCHHCCHHHHHHHHHHHHCCCEEEEECCCCCCC
Q ss_conf             25877788999999975981110120320106988965640990997002259424789999998798799971887558
Q batch____       239 HLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFS  318 (461)
Q Consensus       239 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~gsD~~~~~  318 (461)
                      +.......+.++.+++.+..+......++..                        ......+++++|++++++||+.+..
T Consensus       205 ~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~------------------------~~~~~~~~~~~g~~~~l~sD~~~~~  260 (363)
T c1xrfA_         205 HVSTKLSLEIIEFFKEKGVKITCEVNPNHLL------------------------DRLALIEGVKRGIIDCFATDHAPHQ  260 (363)
T ss_dssp             CCCSHHHHHHHHHHHHTTCCEEEEECGGGGC------------------------CHHHHHHHHHHTCCCEECCCBCCCC
T ss_pred             ECCCCCCHHHHHHHHHCCCEEEECCCCHHHC------------------------CCHHHHHHHHCCCEEEEECCCCCCC
T ss_conf             3477078898999986798897146420122------------------------8888999998898599985886324


Q ss_pred             HHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEECCCC
Q ss_conf             03332210121010468876312348999999987059999899999816489982966760002678706789982898
Q batch____       319 MAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDPRQ  398 (461)
Q Consensus       319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg~~~~~Gsl~~Gk~ADlvilD~~~  398 (461)
                      ..              .+.......++..++... +.++|++++++++|.|||+++|++  +|+|++||+|||||||+|.
T Consensus       261 ~~--------------~~~~~~~~~l~~~~~~~~-~~g~~~~eal~~~T~~~A~~lg~~--~G~i~~G~~ADlvild~d~  323 (363)
T c1xrfA_         261 TM--------------PGIIGLQTALPSALELYR-KGIISLKKLIEMFTINPARIIGVD--LGTLKLGSPADITIFDPNK  323 (363)
T ss_dssp             CC--------------CCBCCGGGHHHHHHHHHH-TTSSCHHHHHHHHTHHHHHHTTCS--CSCCCTTSBCCEEEEEEEE
T ss_pred             CC--------------CCCCHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCEEEEECCC
T ss_conf             55--------------887418889999999999-659998999999817779982988--5511568706789981898


Q ss_pred             CEEECHHHHHHHHCCCCCCCEEECCCEEEEEECCEEEEEC
Q ss_conf             7660766742121578124803038427999999999999
Q batch____       399 SQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCD  438 (461)
Q Consensus       399 ~~~~~~~~~~~~~~~~p~~~~~~~~~v~~viv~G~~v~~~  438 (461)
                      +++++.+++.++..++|+.++.+.++|++|||+||+||+|
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~t~v~G~~v~~~  363 (363)
T c1xrfA_         324 EWILNEETNLSKSRNTPLWGKVLKGKVIYTIKDGKMVYKD  363 (363)
T ss_dssp             EEECSTTTCCSSCCCCTTTTCEEEEEEEEEEETTEEEEEC
T ss_pred             CEEECHHHHHHHCCCCCCCCEEECCCEEEEEECCEEEEEC
T ss_conf             7350745643100668125805207168999999998859