Phyre 2 alignment of Q46841 with c2vi6F_

Return to main results | Retrieve Phyre Job Id

Job Description | Q46841
Confidence | 3.43% | Date | Wed Jan 25 15:21:13 GMT 2012
Rank | 24 | Aligned Residues | 11
% Identity | 27% | Template | c2vi6F_
PDB info | PDB header:transcription | Chain: F: PDB Molecule:homeobox protein nanog; | PDBTitle: crystal structure of the nanog homeodomain
Resolution | 2.6 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 6 | . | . | . | 10 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | K | H | W | F | A | D | G | A | F | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | K | T | W | F | Q | N | Q | R | M | K
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |
|  | 45 | . | . | . | . | 50 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions