27 c3lnpA_ Probab=100.00  E-value=1.2e-33  Score=245.23  Aligned_columns=343  Identities=18%

Q ss_pred             CCCCEEEECCEEECCCC-----CEEEEEEEECCEEEEECCCCCCCCCCCCEEEECCCCEEECCEECCCCCCCCCCCCCCC
Q ss_conf             78867884358988877-----5332079979999996188887767987799886998843516032068377766664
Q batch____         6 AAGFTLLQGAHLYAPED-----RGICDVLVANGKIIAVASNIPSDIVPNCTVVDLSGQILCPGFIDQHVHLIGGGGEAGP   80 (390)
Q Consensus         6 ~~~~tlikn~~i~~~~~-----~~~~di~I~dGrI~~Vg~~~~~~~~~~~~vID~~G~~v~PGlID~H~Hl~~~~~~~~~   80 (390)
                      +-...||||++|+|+++     +..++|+|+||||++||+..+.+ .++++|||++|++|+|||||+|+|+.........
T Consensus         1 a~adliI~ng~vit~~~~~~~vi~~~~V~I~~G~I~~Ig~~~~~~-~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~   79 (441)
T c3lnpA_           1 AHADLRINSHWIIPIENTVSNILIDHCLLIKDGIILAIEPQSSCQ-IPATETLDLGQQVLXPGWVNAHGHAAXSLFRGLA   79 (441)
T ss_dssp             CCEEEEEEEEEECCSSCCCCSCEEEEEEEEETTEEEEEEETTTCC-CCEEEEEECCSEEEEECEEECSCCGGGGGGTTSS
T ss_pred             CCCCEEEECCEEECCCCCCCCEEECCCEEEECCEEEEECCCCCCC-CCCCEEEECCCCEECCCEECCCCCCCCCCCCCCC
T ss_conf             987889988699758688874210521899799999961767888-8887799888989724707342046355545555


Q ss_pred             CCCCHH-------------------------HHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf             202489-------------------------9999999849748974799873105789999999878642972998206
Q batch____        81 TTRTPE-------------------------VALSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEGISAWMLTG  135 (390)
Q Consensus        81 ~~~~~~-------------------------~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  135 (390)
                      ......                         ......+..|+|++.+...      ........................
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~  153 (441)
T c3lnpA_          80 DDLPLXTWLQEHVWPAEAQHVDEHFVKQGTELAIAEXIQSGTTTFADXYF------YPQQSGEAALAAGIRAVCFAPVLD  153 (441)
T ss_dssp             CSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECCS------CHHHHHHHHHHHTCEEEEEEEECS
T ss_pred             CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCC------CHHHHHHHHHHCCCEEEECCCCCC
T ss_conf             55422356653033444356787898889999999875308635502311------001356677743840540365335


Q ss_pred             CCCCCCCCHHHHHHHHHHHCCCC--------CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHH
Q ss_conf             87786410135589999722233--------3103541156544689999999999998877742888379974048999
Q batch____       136 AYHVPSRTITGSVEKDVAIIDRV--------IGVKCAISDHRSAAPDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKK  207 (390)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (390)
                      .......................        .................+.............      .....|......
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~  227 (441)
T c3lnpA_         154 FPTNYAQNADEYIRKAIECNDRFNNHPXNEQGLVQIGFGPHAPYTVSDEPLKEITXLSDQLD------XPVQIHLHETDF  227 (441)
T ss_dssp             SCCSSCSSHHHHHHHHHHHHHHHHSCGGGTTCCEEEEEEECCTTTSCHHHHHHHHHHHHHHT------CCEEEEESCSHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHC------CEEEEHHHCCHH
T ss_conf             54433342367787679999998740135455145531466532379889888774578719------904402320634


Q ss_pred             HHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEE----E
Q ss_conf             999999999716972687851422365346899999864394899704578211493889999981998306886----2
Q batch____       208 ALQPIYDLLENCDVPISKLLPTHVNRNVPLFEQALEFARKGGTIDITSSIDEPVAPAEGIARAVQAGIPLARVTL----S  283 (390)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  283 (390)
                      ............                    ........+.........+..+...+.+....+.+......+.    .
T Consensus       228 ~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (441)
T c3lnpA_         228 EVSESLETFNKR--------------------PTQRLADIGFLNERVSCVHXTQVDDGDIKILQKTGASIIHCPESNLKL  287 (441)
T ss_dssp             HHHHHHHHHSSC--------------------HHHHHHHTTCCSTTEEEEECCSCCHHHHHHHHHHCCEEEECHHHHHHT
T ss_pred             HHHHHHHHHCCC--------------------HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEECCHHHHHH
T ss_conf             799999882884--------------------789999769866837984276699989999985499199856357632


Q ss_pred             CCCCCCCCCHHHCCCCCCCCCCCHHH-------------HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC-CEEC
Q ss_conf             24555455213249633368775556-------------899999999973999889999981658998077886-3106
Q batch____       284 SDGNGSQPFFDDEGNLTHIGVAGFET-------------LLETVQVLVKDYDFSISDALRPLTSSVAGFLNLTGK-GEIL  349 (390)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~g~~~~~~-------------~~~~~~~~~~~~gls~~eal~~~T~~~A~~lg~~~~-G~i~  349 (390)
                      .............+.....|++....             .......+..+.++|++++++++|.|||++||++++ |+|+
T Consensus       288 ~~~~~~~~~~~~~g~~~~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gls~~~al~~~T~npA~~lgl~~~~G~I~  367 (441)
T c3lnpA_         288 ASGFCPIAKLSAANIPLAIGTDGAASNNDLDXFSETKTAALLAKGVSQDASAIPAIEALTXATLGGARALGIDDITGSLK  367 (441)
T ss_dssp             TCCCCCHHHHHHTTCCEEECCCCTTSSCCCCHHHHHHHHHHHHHHHHTCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCC
T ss_pred             HCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEC
T ss_conf             03804589999889879997487777786104789999887788742000389999999999773799839887600135


Q ss_pred             CCCCCCEEEECCC--------------------CCEEEEEECCEEEEECCEE
Q ss_conf             6770578999899--------------------9830899999999999989
Q batch____       350 PGNDADLLVMTPE--------------------LRIEQVYARGKLMVKDGKA  381 (390)
Q Consensus       350 ~Gk~ADlvild~d--------------------~~i~~v~~~G~~v~~~gk~  381 (390)
                      +||+|||+|||+|                    .+|..||++||+||+||++
T Consensus       368 ~G~~ADlvv~D~d~l~~~~~~d~~~~~~~~~~~~~v~~viv~G~~v~~~g~~  419 (441)
T c3lnpA_         368 PGKAADIQAIDLNTLSSQPVFDPVSHXVYCTKSTQVSHVWVNGRCLLKNGEL  419 (441)
T ss_dssp             TTSBCCEEEEECCSGGGCSCSCHHHHHHHSCCGGGEEEEEETTEEEEETTEE
T ss_pred             CCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCEEEEECCEE
T ss_conf             7870668998288611076221122210047788811999999999989989