26/01/2012 03:40:13 : INFO  : Run start: Thu Jan 26 03:40:12 GMT 2012
26/01/2012 03:40:17 : INFO  : Initialised job
26/01/2012 03:40:17 : INFO  : Renaming log file 'phyre2_20120126_034011.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/c4992a6616a72f2e/phyre_20120126_034011.log'
26/01/2012 03:40:18 : INFO  : Initialised job:
Sequence
>batch____
MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLT
MAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHT
GGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSI
PLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAIVGVANGAGVRTTALLT
DMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVTMALCVEMLISGKLAKDDAEARAKL
QAVLDNGKAAEVFGRMVAAQKGPTDFVENYAKYLPTAMLTKAVYADTEGFVSEMDTRALG
MAVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLAVIHAKDENNWQEAAKAVKAA
IKLADKAPESTPTVYRRISE

26/01/2012 03:40:19 : INFO  : Checked sequence
26/01/2012 03:40:21 : INFO  : Finding homologues with PSI-BLAST
26/01/2012 03:40:21 : INFO  : PSI-BLAST 3 iterations
26/01/2012 03:42:37 : INFO  : PSI-BLAST 5 iterations
26/01/2012 03:45:59 : INFO  : Finished PSI-BLAST
26/01/2012 03:46:00 : INFO  : Running Buildali to generate a3m file
26/01/2012 03:53:39 : INFO  : Converting to HMM
26/01/2012 03:53:43 : INFO  : Calibrating HMM
26/01/2012 03:54:01 : INFO  : Searching HMM database
26/01/2012 04:04:17 : INFO  : Finished buildali
26/01/2012 04:04:18 : INFO  : Predicting secondary structure
26/01/2012 04:04:22 : INFO  : Predicted secondary structure (PSI-Pred)
26/01/2012 04:04:23 : INFO  : Predicting Disordered regions
26/01/2012 04:04:26 : INFO  : Predicted Disorder (Disopred)
26/01/2012 04:04:27 : INFO  : Running memsat_svm check
26/01/2012 04:05:42 : INFO  : Globular protein
26/01/2012 04:05:42 : INFO  : Predicted Transmembrane (memsat_svm) ID 'c4992a6616a72f2e'
26/01/2012 04:05:43 : INFO  : Initialising fold library search
26/01/2012 04:05:44 : INFO  : Initialised search input
26/01/2012 04:05:46 : INFO  : Building Ensemble models
26/01/2012 04:05:48 : INFO  : Building hh.c1otpA_.model.1.pdb
26/01/2012 04:05:57 : INFO  : Building c1otpA_.1.pdb
26/01/2012 04:06:04 : INFO  : Building c2j0fC_.2.pdb
26/01/2012 04:06:11 : INFO  : Building c1brwB_.3.pdb
26/01/2012 04:06:18 : INFO  : Building c2dsjA_.4.pdb
26/01/2012 04:06:27 : INFO  : Building c3h5qA_.5.pdb
26/01/2012 04:06:35 : INFO  : Building d2tpta2.6.pdb
26/01/2012 04:06:42 : INFO  : Building c1khdD_.7.pdb
26/01/2012 04:06:49 : INFO  : Building c1v8gB_.8.pdb
26/01/2012 04:06:56 : INFO  : Building c1vquB_.9.pdb
26/01/2012 04:07:03 : INFO  : Building c1o17A_.10.pdb
26/01/2012 04:07:12 : INFO  : Building d1brwa2.11.pdb
26/01/2012 04:07:19 : INFO  : Building d1uoua2.12.pdb
26/01/2012 04:07:27 : INFO  : Building c2bpqB_.13.pdb
26/01/2012 04:07:35 : INFO  : Building d2elca2.14.pdb
26/01/2012 04:07:42 : INFO  : Building d1o17a2.15.pdb
26/01/2012 04:07:48 : INFO  : Building d1khda2.16.pdb
26/01/2012 04:07:55 : INFO  : Building d2tpta3.17.pdb
26/01/2012 04:08:03 : INFO  : Building d1brwa3.18.pdb
26/01/2012 04:08:10 : INFO  : Building d1uoua3.19.pdb
26/01/2012 04:08:17 : INFO  : Building d2tpta1.20.pdb
26/01/2012 04:08:34 : INFO  : Finished HH model building
26/01/2012 04:08:35 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
26/01/2012 04:09:13 : INFO  : html domain output complete ID 'c4992a6616a72f2e'
26/01/2012 05:34:15 : INFO  : Run end  : Thu Jan 26 05:34:14 GMT 2012
