Phyre 2 alignment of P07650 with c2zkrh_

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Job Description | P07650
Confidence | 42.48% | Date | Wed Jan 25 15:20:12 GMT 2012
Rank | 103 | Aligned Residues | 28
% Identity | 21% | Template | c2zkrh_
PDB info | PDB header:ribosomal protein/rna | Chain: H: PDB Molecule:rna expansion segment es12; | PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
Resolution | 8.70 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | Q | V | D | G | Q | R | P | L | A | V | I | H | A | K | D | E | N | N | W | Q | E | A | A | K | A | V | K | A | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | V | H | I | G | Q | V | I | M | S | I | R | T | K | L | Q | . | N | K | E | H | V | I | E | A | L | R | R | A
Template Known Secondary structure |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | S | T | . | T |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 127 | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |  | . | . | . | . | . | . | . | 150 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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