356 c3snkA_ Probab=81.48   E-value=3.6  Score=19.95  Aligned_columns=90  Identities=12%

Q ss_pred             CCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCEEEEC--CCCCCHHHHHHHHHHHCCCC-CEE
Q ss_conf             798899997899999999999997289947999887789654018997589988--87035358999999964998-199
Q batch____       254 PDMQLTGIEIASEAIACAKQSAAELGLTRLQFQALDSTQFATAQGDVPELVLVN--PPRRGIGKPLCDYLSTMAPR-FII  330 (375)
Q Consensus       254 ~~~~V~gvE~~~~ai~~a~~n~~~~~l~nv~~~~~d~~~~~~~~~~~~d~vi~d--PPR~G~~~~v~~~l~~~~~~-~iv  330 (375)
                      +.++|.-||-++...+..+..+...+...+.......+.........+|+|++|  +|..+ +..+++.++...+. .++
T Consensus         1 k~~kILivddd~~~~~~l~~~L~~~~~~~v~~~~~~~~~~~~~~~~~~dlvi~d~~l~~~~-g~~~~~~l~~~~~~~pii   79 (119)
T c3snkA_           1 KRKQVALFSSDPNFKRDVATRLDALAIYDVRVSETDDFLKGPPADTRPGIVILDLGGGDLL-GKPGIVEARALWATVPLI   79 (119)
T ss_dssp             CCEEEEEECSCHHHHHHHHHHHHHTSSEEEEEECGGGGGGCCCTTCCCSEEEEEEETTGGG-GSTTHHHHHGGGTTCCEE
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEEEEHHHCCCCC-CCCCCCCCCCCCCCCCCC
T ss_conf             9747999808989999999998531000111123321158884058966998712125466-321111122222211222


Q ss_pred             EEEC--CHHHHHHHHH
Q ss_conf             9978--9899998699
Q batch____       331 YSSC--NAQTMAKDIR  344 (375)
Q Consensus       331 yvsC--~p~tl~rdl~  344 (375)
                      ++|.  ++.+..+-+.
T Consensus        80 ~lt~~~~~~~~~~~~~   95 (119)
T c3snkA_          80 AVSDELTSEQTRVLVR   95 (119)
T ss_dssp             EEESCCCHHHHHHHHH
T ss_pred             CCCCCCCCCCCCHHHH
T ss_conf             2133210000001110


