Phyre 2 alignment of P75817 with d2aama1

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Job Description | P75817
Confidence | 64.66% | Date | Thu Jan 5 12:14:29 GMT 2012
Rank | 389 | Aligned Residues | 35
% Identity | 11% | Template | d2aama1
SCOP info | TIM beta/alpha-barrel | (Trans)glycosidases | TM1410-like
Resolution | 2.20

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 299 | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . |  |  |  |  |  | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | V | P | E | L | V | L | V | N | P | P | R | R | G | I | G | . | . | . | . | . | K | P | L | C | D | Y | L | S | T | M | A | P | R | F | I | I | Y | S | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | G | F | E | I | A | V | I | D | Y | S | K | D | G | S | E | S | G | E | Y | S | P | E | E | I | K | I | X | V | D | A | G | V | V | P | V | A | Y | V | N
Template Known Secondary structure |  | S |  |  | S |  |  |  |  |  | S | B | S | S | S | S | G | G | G | B |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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