Phyre 2 alignment of P24082 with c1y89B_

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Job Description | P24082
Confidence | 7.12% | Date | Thu Jan 5 11:40:43 GMT 2012
Rank | 98 | Aligned Residues | 34
% Identity | 38% | Template | c1y89B_
PDB info | PDB header:structural genomics, unknown function | Chain: B: PDB Molecule:devb protein; | PDBTitle: crystal structure of devb protein
Resolution | 2.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 523 | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . | 560 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | A | Q | I | V | Q | Q | Q | G | R | N | G | Q | L | R | I | S | F | G | S | A | K | H | P | D | C | R | G | I | T | V | D | E | L | . | . | . | . | . | . | . | . | . | . | Q | K | I | Q | F | N | R | L | D | F
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | X | L | A | Y | S | Q | Q | G | Q | P | V | . | H | I | S | L | S | . | . | . | . | . | . | . | . | . | G | G | S | T | P | K | X | L | F | K | L | L | A | S | Q | P | Y | A | N | D | I | Q | W | K | N | L | H | F
Template Known Secondary structure |  |  |  |  |  |  | T | S | S | S |  |  | . |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  | S |  |  |  |  |  |  |  |  |  |  | T | S | T | T |  |  |  |  | S |  | G | G | G |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 21 | . | . | . | . | . | . | . | . | 30 | . |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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