Phyre 2 alignment of P24082 with c2k1gA_

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Job Description | P24082
Confidence | 11.84% | Date | Thu Jan 5 11:40:43 GMT 2012
Rank | 67 | Aligned Residues | 30
% Identity | 27% | Template | c2k1gA_
PDB info | PDB header:lipoprotein | Chain: A: PDB Molecule:lipoprotein spr; | PDBTitle: solution nmr structure of lipoprotein spr from escherichia coli k12.2 northeast structural genomics target er541-37-162
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . |  |  | 540 | . |  |  | . | . | . | . | . | . | . | . | 550 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  | . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  | . | . |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | S | K | L | A | Q | I | V | Q | Q | Q | G | R | N | G | Q | L | R | I | S | . | . | F | G | . | . | S | A | K | H | P | D | C | R | G | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  | . | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  | . | . |  |  | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | D | V | K | S | R | I | M | D | Q | Y | A | D | . | . | W | K | G | V | R | Y | R | L | G | G | S | T | K | K | G | I | D | C | S | G | F
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  | T | T |  |  |  |  | S | S |  |  | B | T | T | B |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 |  |  | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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