Phyre 2 alignment of P24082 with c2knyA_

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Job Description | P24082
Confidence | 11.13% | Date | Thu Jan 5 11:40:43 GMT 2012
Rank | 71 | Aligned Residues | 25
% Identity | 32% | Template | c2knyA_
PDB info | PDB header:metal binding protein | Chain: A: PDB Molecule:lrp-1, linker, apo-e; | PDBTitle: fusion construct of cr17 from lrp-1 and apoe residues 130-149
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 382 | . | . | . |  | . | . | . | . | 390 |  | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  | . |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  | . |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | Y | S | C | . | E | S | K | T | S | . | G | K | V | M | V | C | G | G | D | V | F | C | L | D | G | E
Query Conservation |  |  |  |  |  | . |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  | . |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | F | S | C | P | G | T | H | V | C | V | P | E | R | W | L | C | D | G | D | K | D | C | A | D | G | A
Template Known Secondary structure |  |  |  |  |  | T | T | S | S |  |  |  |  |  |  |  |  | T | T | S | S |  |  | S | S | S | S | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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