Phyre 2 alignment of P24082 with c3a7qB_

Return to main results | Retrieve Phyre Job Id

Job Description | P24082
Confidence | 32.87% | Date | Thu Jan 5 11:40:43 GMT 2012
Rank | 21 | Aligned Residues | 25
% Identity | 28% | Template | c3a7qB_
PDB info | PDB header:signaling protein | Chain: B: PDB Molecule:low-density lipoprotein receptor-related protein 8; | PDBTitle: structural basis for specific recognition of reelin by its receptors
Resolution | 2.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 382 | . | . | . | . | . | . | . | 390 |  | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | Y | S | C | E | S | K | T | S | . | G | K | V | M | V | C | G | G | D | V | F | C | L | D | G | E
Query Conservation |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Q | F | Q | C | R | N | E | R | C | I | P | S | V | W | R | C | D | E | D | D | D | C | L | D | H | S
Template Known Secondary structure |  |  |  |  |  | T | T | S |  |  |  |  | G | G | G | T | T | S | S | S |  |  | S | S | S | S | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions