Phyre 2 alignment of P24082 with c2i1pA_

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Job Description | P24082
Confidence | 12.17% | Date | Thu Jan 5 11:40:43 GMT 2012
Rank | 62 | Aligned Residues | 24
% Identity | 21% | Template | c2i1pA_
PDB info | PDB header:ligand binding protein | Chain: A: PDB Molecule:low-density lipoprotein receptor-related protein | PDBTitle: solution structure of the twelfth cysteine-rich ligand-2 binding repeat in rat megalin
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 383 | . | . | . | . | . |  | . | 390 |  | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | S | C | E | S | K | . | T | S | . | G | K | V | M | V | C | G | G | D | V | F | C | L | D | G | E
Query Conservation |  |  |  |  |  |  |  | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | K | C | A | D | G | S | S | C | I | N | S | R | Y | R | C | D | G | V | Y | D | C | R | D | N | S
Template Known Secondary structure |  |  |  |  | S | S | S | S |  |  |  |  | G | G | G | S | S | S | S | S |  |  | S | S | S | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 1193 | . | . | . | . | . | . | 1200 | . | . | . | . | . | . | . | . | . | 1210 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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