Phyre 2 alignment of P24082 with c3pbiA_

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Job Description | P24082
Confidence | 12.08% | Date | Thu Jan 5 11:40:43 GMT 2012
Rank | 64 | Aligned Residues | 35
% Identity | 23% | Template | c3pbiA_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:invasion protein; | PDBTitle: structure of the peptidoglycan hydrolase ripb (rv1478) from2 mycobacterium tuberculosis at 1.6 resolution
Resolution | 1.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 523 | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . |  |  | 540 | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | 550 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | A | Q | I | V | Q | Q | Q | G | R | N | G | Q | L | R | I | S | . | . | F | G | S | A | K | H | P | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | D | C | R | G | I | T | V | D | E | L | Q | K | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  | . | . |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | E | Y | V | I | R | R | A | G | S | . | . | Q | M | G | V | P | Y | S | W | G | G | G | S | L | Q | G | P | S | K | G | V | D | S | G | A | N | T | V | G | F | D | C | S | G | L | V | R | Y | A | F | A | G | V
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . | T | T | T |  | B | B |  | T | T |  |  |  | S | S | S |  |  |  |  | S | G | G | G | T | T |  |  |  | B |  |  |  |  |  |  |  |  |  |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 112 | . | . | . | . | . | . | . | 120 | . |  |  | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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