Phyre 2 alignment of P24082 with c2ekwC_

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Job Description | P24082
Confidence | 23.10% | Date | Thu Jan 5 11:40:43 GMT 2012
Rank | 30 | Aligned Residues | 33
% Identity | 21% | Template | c2ekwC_
PDB info | PDB header:contractile protein | Chain: C: PDB Molecule:myosin catalytic light chain lc-1, mantle muscle; | PDBTitle: the crystal structure of squid myosin s1 in the presence of2 so4 2-
Resolution | 3.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 548 | . | 550 | . | . | . | . | . | . | . | . | . |  |  |  |  | 560 | . | . |  |  |  |  |  | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | C | R | G | I | T | V | D | E | L | Q | K | I | . | . | . | . | Q | F | N | . | . | . | . | . | R | L | D | F | T | N | F | Y | E | D | L | M | N | N | Q | K | I | P | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
Template Sequence |  | G | E | R | I | T | E | D | Q | C | N | D | I | F | T | F | C | D | I | R | E | D | I | D | G | N | I | K | Y | E | D | L | M | K | K | V | M | A | G | . | P | F | P | D
Template Known Secondary structure |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  | . | S | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |  | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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