Phyre 2 alignment of P76352 with d2iuba2

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Job Description | P76352
Confidence | 26.66% | Date | Thu Jan 5 12:22:17 GMT 2012
Rank | 5 | Aligned Residues | 47
% Identity | 13% | Template | d2iuba2
SCOP info | Transmembrane helix hairpin | Magnesium transport protein CorA, transmembrane region | Magnesium transport protein CorA, transmembrane region
Resolution | 2.9

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 419 | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | Y | A | M | W | V | S | M | L | S | M | W | G | C | R | V | V | V | G | Y | V | L | G | I | M | L | G | W | G | V | V | G | V | W | M | G | M | F | A | D | W | A | V | R | A | V | L | F | Y | W | R | M | V | T | G | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | V | M | K | V | L | T | I | I | A | . | . | T | I | F | M | P | L | T | F | I | A | . | . | . | . | . | . | G | I | Y | G | Y | P | V | . | V | L | A | V | M | G | V | I | A | V | I | M | V | V | Y | F | K | K | K | K
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | T | S |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 289 | 290 | . | . | . | . | . | . | . | . |  |  | . | 300 | . | . | . | . | . | . | . | . |  |  |  |  |  |  | . | 310 | . | . | . | . | . |  | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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