Phyre 2 alignment of P76352 with c2v0xB_

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Job Description | P76352
Confidence | 1.26% | Date | Thu Jan 5 12:22:17 GMT 2012
Rank | 80 | Aligned Residues | 22
% Identity | 23% | Template | c2v0xB_
PDB info | PDB header:cell cycle | Chain: B: PDB Molecule:lamina-associated polypeptide 2 isoforms | PDBTitle: the dimerization domain of lap2alpha
Resolution | 2.2 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 471 | . | . | . | . | . | . |  |  | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | T | G | R | W | L | W | . | . | K | Y | P | R | P | E | P | Q | K | C | E | K | K | P | V
Query Conservation |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | R | Y | L | W | L | K | D | C | K | I | S | P | A | S | K | N | K | L | T | V | A | P | F
Template Known Secondary structure |  |  |  |  |  |  |  | T | T |  |  | S |  |  |  |  |  |  |  |  |  |  | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 649 | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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