Phyre 2 alignment of P76352 with c2v6zM_

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Job Description | P76352
Confidence | 1.18% | Date | Thu Jan 5 12:22:17 GMT 2012
Rank | 87 | Aligned Residues | 24
% Identity | 8% | Template | c2v6zM_
PDB info | PDB header:transferase | Chain: M: PDB Molecule:dna polymerase epsilon subunit 2; | PDBTitle: solution structure of amino terminal domain of human dna2 polymerase epsilon subunit b
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 472 | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | G | R | W | L | W | K | Y | P | R | P | E | P | Q | K | C | E | K | K | P | V | V | S | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | E | D | K | L | E | K | I | I | N | A | V | E | K | Q | P | L | S | S | N | M | I | E | R
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  | S | S | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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