Phyre 2 alignment of P76352 with d1u6pa_

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Job Description | P76352
Confidence | 3.42% | Date | Thu Jan 5 12:22:17 GMT 2012
Rank | 31 | Aligned Residues | 20
% Identity | 20% | Template | d1u6pa_
SCOP info | Retrovirus zinc finger-like domains | Retrovirus zinc finger-like domains | Retrovirus zinc finger-like domains
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 472 | . | . | . | . | . | . | . | 480 |  | . | . | . | . | . | . | . | . | . | 490 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | G | R | W | L | W | K | Y | P | . | R | P | E | P | Q | K | C | E | K | K | P
Query Conservation |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | G | H | W | A | K | D | C | P | K | K | P | R | G | P | R | G | P | R | P | Q
Template Known Secondary structure |  | B | S | S |  | G | G | G |  | T | T |  |  |  | S | S |  | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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