 |
| Job Description | Q46866 | | Confidence | 1.09% | Date | Thu Jan 5 12:35:25 GMT 2012 |
| Rank | 92 | Aligned Residues | 31 |
| % Identity | 10% | Template | c1jsdB_ |
| PDB info |
PDB header:viral protein | Chain: B: PDB Molecule:haemagglutinin (ha2 chain); |
PDBTitle: crystal structure of swine h9 haemagglutinin
|
| Resolution | 1.80 Å |
|
|   |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  |  |
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
D | D | I | S | H | T | V | W | G | I | I | R | H | W | L | P | A | S | G | E | K | M | R | K | A | P | I | L | F | H | Y | T | N |
| Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |
|   |   |
|
| . |
|
|   |
|   |   |
|
|   |
|   |
|
|
| . |
|
|
|   |   |
|
|
| Template Sequence |   |
A | N | V | N | N | L | Y | N | K | V | . |
K | R | A | L | G | S | N | A | M | E | D | G | K | G | . |
C | F | E | L | Y | H | K |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . |  |  |  |  | G | G | G |  |  |  |
| S | S | S | . |
|  |  |  | S | S |
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
|  |  | . |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
113 | . | . | . | . | . | . | 120 | . | . | |
. | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
. | . | . | 140 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|