Phyre 2 alignment of P0A6E6 with c3hqxA_

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Job Description | P0A6E6
Confidence | 67.59% | Date | Thu Jan 5 11:02:57 GMT 2012
Rank | 10 | Aligned Residues | 70
% Identity | 24% | Template | c3hqxA_
PDB info | PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:upf0345 protein aciad0356; | PDBTitle: crystal structure of protein of unknown function (duf1255,pf06865)2 from acinetobacter sp. adp1
Resolution | 1.66 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . |  |  |  | . | . | . | . |  | . | . |  |  |  |  |  |  |  |  | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  | . |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  | . |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | D | V | V | S | A | E | Q | Q | M | F | S | G | L | V | E | K | I | Q | V | T | G | S | E | G | E | . | . | . | L | G | I | Y | . | P | G | . | . | . | . | . | . | . | . | H | A | P | L | L | T | A | I | K | P | G | M | I | R | I | V | K | Q | H | G | H | E | E | F | I | Y | L | S | G | G | I | L | E | V | Q | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  | . |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  | . |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | T | V | I | K | K | S | N | V | Y | F | G | G | L | C | I | S | H | T | V | Q | F | E | D | G | T | K | K | T | L | G | V | I | L | P | T | E | Q | P | L | T | F | E | T | H | V | P | E | R | X | E | I | I | S | G | E | C | R | V | K | I | A | D | S | T | E | S | E | L | F | R | A | G | Q | S | F | Y | V | P | G
Template Known Secondary structure |  |  |  |  |  | S | S |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  | T | T |  | S | S |  |  |  |  |  | T | T |  |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | .
|  | 75 | .
Predicted Secondary structure |  |  |
Query SS confidence |  |  |
Query Sequence |  | G | N
Query Conservation |  |  |
Alig confidence |  |  |
Template Conservation |  |  |
Template Sequence |  | N | S
Template Known Secondary structure |  | T |
Template Predicted Secondary structure |  |  |
Template SS confidence |  |  |
|  | 89 | 90

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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