Phyre 2 alignment of P0A6E6 with c2f3iA_

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Job Description | P0A6E6
Confidence | 2.91% | Date | Thu Jan 5 11:02:57 GMT 2012
Rank | 100 | Aligned Residues | 32
% Identity | 9% | Template | c2f3iA_
PDB info | PDB header:transferase | Chain: A: PDB Molecule:dna-directed rna polymerases i, ii, and iii 17.1 | PDBTitle: solution structure of a subunit of rna polymerase ii
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | M | T | Y | H | L | D | V | V | S | A | E | Q | Q | M | F | S | G | L | V | E | K | I | Q | V | T | G | S | E | G | E | L | G | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | I | F | D | V | K | D | I | D | P | E | G | K | K | F | D | . | R | V | S | R | L | H | C | E | S | E | S | F | K | M | D | L
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | T | . | T |  |  |  |  |  |  |  |  | S | S | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . |  | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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