18/01/2012 16:19:25 : INFO  : Run start: Wed Jan 18 16:19:23 GMT 2012
18/01/2012 16:19:34 : INFO  : Initialised job
18/01/2012 16:19:37 : INFO  : Renaming log file 'phyre2_20120118_161922.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/c3b14a7c0fb6a39e/phyre_20120118_161922.log'
18/01/2012 16:19:41 : INFO  : Initialised job:
Sequence
>batch____
MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHE
EFIYLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASA
ELAKAIAQLRVIELTKKAM

18/01/2012 16:19:43 : INFO  : Checked sequence
18/01/2012 16:19:50 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 16:19:52 : INFO  : PSI-BLAST 3 iterations
18/01/2012 16:21:19 : INFO  : PSI-BLAST 5 iterations
18/01/2012 16:22:17 : INFO  : Finished PSI-BLAST
18/01/2012 16:22:21 : INFO  : Running Buildali to generate a3m file
18/01/2012 16:29:58 : INFO  : Converting to HMM
18/01/2012 16:30:01 : INFO  : Calibrating HMM
18/01/2012 16:30:19 : INFO  : Searching HMM database
18/01/2012 16:33:12 : INFO  : Finished buildali
18/01/2012 16:33:14 : INFO  : Predicting secondary structure
18/01/2012 16:33:29 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 16:33:32 : INFO  : Predicting Disordered regions
18/01/2012 16:33:39 : INFO  : Predicted Disorder (Disopred)
18/01/2012 16:33:42 : INFO  : Running memsat_svm check
18/01/2012 16:38:15 : INFO  : Running memsat_svm full
18/01/2012 16:43:21 : INFO  : Predicted Transmembrane (memsat_svm) ID 'c3b14a7c0fb6a39e'
18/01/2012 16:43:25 : INFO  : Initialising fold library search
18/01/2012 16:43:31 : INFO  : Initialised search input
18/01/2012 16:43:35 : INFO  : Building Ensemble models
18/01/2012 16:43:42 : INFO  : Building hh.c1fs0E_.model.1.pdb
18/01/2012 16:44:12 : INFO  : Building c2rq7A_.1.pdb
18/01/2012 16:44:40 : INFO  : Building c2e5yA_.2.pdb
18/01/2012 16:45:11 : INFO  : Building c1fs0E_.3.pdb
18/01/2012 16:45:40 : INFO  : Building c2qe7H_.4.pdb
18/01/2012 16:46:08 : INFO  : Building c2hldH_.5.pdb
18/01/2012 16:46:38 : INFO  : Building d1aqta2.6.pdb
18/01/2012 16:47:08 : INFO  : Building c1h8eH_.7.pdb
18/01/2012 16:47:39 : INFO  : Building c2e5tA_.8.pdb
18/01/2012 16:48:10 : INFO  : Building d1aqta1.9.pdb
18/01/2012 16:48:40 : INFO  : Building c3hqxA_.10.pdb
18/01/2012 16:49:11 : INFO  : Building d1y60a_.11.pdb
18/01/2012 16:49:44 : INFO  : Building d2jdih1.12.pdb
18/01/2012 16:50:15 : INFO  : Building c2qz7B_.13.pdb
18/01/2012 16:50:47 : INFO  : Building d2ck3h1.14.pdb
18/01/2012 16:51:19 : INFO  : Building c2qnuB_.15.pdb
18/01/2012 16:51:50 : INFO  : Building d2jera1.16.pdb
18/01/2012 16:52:21 : INFO  : Building d1vkpa_.17.pdb
18/01/2012 16:52:51 : INFO  : Building c3eo6B_.18.pdb
18/01/2012 16:53:21 : INFO  : Building c2jerG_.19.pdb
18/01/2012 16:53:52 : INFO  : Building c2vhgB_.20.pdb
18/01/2012 16:54:58 : INFO  : Finished HH model building
18/01/2012 16:55:01 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 16:56:11 : INFO  : html domain output complete ID 'c3b14a7c0fb6a39e'
18/01/2012 17:06:43 : INFO  : Run end  : Wed Jan 18 17:06:41 GMT 2012
