Phyre 2 alignment of P0A6E6 with c1i8dB_

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Job Description | P0A6E6
Confidence | 3.89% | Date | Thu Jan 5 11:02:57 GMT 2012
Rank | 63 | Aligned Residues | 46
% Identity | 17% | Template | c1i8dB_
PDB info | PDB header:transferase | Chain: B: PDB Molecule:riboflavin synthase; | PDBTitle: crystal structure of riboflavin synthase
Resolution | 2.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . |  |  | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | Y | P | G | H | A | P | L | L | T | A | I | K | P | . | . | G | M | I | R | I | V | K | Q | H | G | H | E | E | F | I | Y | L | S | G | G | I | L | E | V | Q | P | G | N | V | T | V | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | M | S | G | H | I | M | T | T | A | E | V | A | K | I | L | R | Q | I | W | F | K | V | Q | D | S | Q | L | M | K | Y | I | L | Y | K | G | F | I | G | I | D | G | I | S | L | T | V | G
Template Known Secondary structure |  |  | B |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | G | G | G | G | G | G |  |  | T | T | S |  |  |  |  | T | T |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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