14/01/2012 04:50:27 : INFO  : Run start: Sat Jan 14 04:50:26 GMT 2012
14/01/2012 04:50:31 : INFO  : Initialised job
14/01/2012 04:50:33 : INFO  : Renaming log file 'phyre2_20120114_045025.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/c3753b9c3cbe846c/phyre_20120114_045025.log'
14/01/2012 04:50:34 : INFO  : Initialised job:
Sequence
>batch____
MDIALVRLFKCVELHNSKLDLTDLHLGSLPPLPSWIEVLYLRHNGLATIQIPKFCKELEL
DFNNYMVFPKVSDGITQVSVDNNLISRVDSSPSKAMTISIYRNKIWXIPAMPETTKLFNC
GDNKIKEIQYFPNHLEKARMECDIEVVSAIYSNKELLFKECNSFEETFLYHGL

14/01/2012 04:50:34 : INFO  : Checked sequence
14/01/2012 04:50:37 : INFO  : Finding homologues with PSI-BLAST
14/01/2012 04:50:38 : INFO  : PSI-BLAST 3 iterations
14/01/2012 04:52:01 : INFO  : PSI-BLAST 5 iterations
14/01/2012 04:55:34 : INFO  : Finished PSI-BLAST
14/01/2012 04:55:35 : INFO  : Running Buildali to generate a3m file
14/01/2012 05:01:45 : INFO  : Converting to HMM
14/01/2012 05:01:47 : INFO  : Calibrating HMM
14/01/2012 05:01:55 : INFO  : Searching HMM database
14/01/2012 05:05:11 : INFO  : Finished buildali
14/01/2012 05:05:11 : INFO  : Predicting secondary structure
14/01/2012 05:05:16 : INFO  : Predicted secondary structure (PSI-Pred)
14/01/2012 05:05:18 : INFO  : Predicting Disordered regions
14/01/2012 05:05:21 : INFO  : Predicted Disorder (Disopred)
14/01/2012 05:05:22 : INFO  : Running memsat_svm check
14/01/2012 05:07:29 : INFO  : Running memsat_svm full
14/01/2012 05:12:16 : INFO  : Predicted Transmembrane (memsat_svm) ID 'c3753b9c3cbe846c'
14/01/2012 05:12:17 : INFO  : Initialising fold library search
14/01/2012 05:12:21 : INFO  : Initialised search input
14/01/2012 05:12:24 : INFO  : Building Ensemble models
14/01/2012 05:12:26 : INFO  : Building hh.c3g06A_.model.1.pdb
14/01/2012 05:12:34 : INFO  : Building hh.c3cvrA_.model.2.pdb
14/01/2012 05:12:41 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/c3753b9c3cbe846c/hh.c3cvrA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/c3753b9c3cbe846c/c3cvrA_.2.pdb
14/01/2012 05:12:43 : INFO  : Building hh.d1jl5a_.model.3.pdb
14/01/2012 05:12:51 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/c3753b9c3cbe846c/hh.d1jl5a_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/c3753b9c3cbe846c/d1jl5a_.3.pdb
14/01/2012 05:12:54 : INFO  : Building c3g06A_.1.pdb
14/01/2012 05:13:03 : INFO  : Building c3cvrA_.2.pdb
14/01/2012 05:13:13 : INFO  : Building d1jl5a_.3.pdb
14/01/2012 05:13:24 : INFO  : Building c1g9uA_.4.pdb
14/01/2012 05:13:33 : INFO  : Building c1m9sA_.5.pdb
14/01/2012 05:13:42 : INFO  : Building c3a79B_.6.pdb
14/01/2012 05:13:52 : INFO  : Building c1wwlA_.7.pdb
14/01/2012 05:14:01 : INFO  : Building c2a0zA_.8.pdb
14/01/2012 05:14:12 : INFO  : Building c1ziwA_.9.pdb
14/01/2012 05:14:23 : INFO  : Building c2z64A_.10.pdb
14/01/2012 05:14:33 : INFO  : Building c3j0aB_.11.pdb
14/01/2012 05:14:42 : INFO  : Building c3fxiA_.12.pdb
14/01/2012 05:14:53 : INFO  : Building c2z7xB_.13.pdb
14/01/2012 05:15:01 : INFO  : Building c2o6rA_.14.pdb
14/01/2012 05:15:09 : INFO  : Building c1ookG_.15.pdb
14/01/2012 05:15:18 : INFO  : Building c3e6jA_.16.pdb
14/01/2012 05:15:29 : INFO  : Building c2ft3B_.17.pdb
14/01/2012 05:15:38 : INFO  : Building c2o6sA_.18.pdb
14/01/2012 05:15:47 : INFO  : Building c2z63A_.19.pdb
14/01/2012 05:15:56 : INFO  : Building c3ojaA_.20.pdb
14/01/2012 05:16:40 : INFO  : Finished HH model building
14/01/2012 05:16:41 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
14/01/2012 05:17:29 : INFO  : html domain output complete ID 'c3753b9c3cbe846c'
14/01/2012 05:17:48 : WARN  : Failed to run assembler on model
14/01/2012 05:34:43 : WARN  : Failed to run assembler on model
14/01/2012 05:35:17 : WARN  : Failed to run assembler on model
14/01/2012 05:35:24 : WARN  : Failed to run assembler on model
14/01/2012 05:35:41 : WARN  : Failed to run assembler on model
14/01/2012 05:37:19 : WARN  : Failed to run assembler on model
14/01/2012 05:37:45 : WARN  : Failed to run assembler on model
14/01/2012 05:38:23 : WARN  : Failed to run assembler on model
14/01/2012 05:38:56 : WARN  : Failed to run assembler on model
14/01/2012 05:39:28 : WARN  : Failed to run assembler on model
14/01/2012 05:39:50 : WARN  : Failed to run assembler on model
14/01/2012 05:40:11 : WARN  : Failed to run assembler on model
14/01/2012 05:40:34 : WARN  : Failed to run assembler on model
14/01/2012 05:41:02 : WARN  : Failed to run assembler on model
14/01/2012 05:41:25 : WARN  : Failed to run assembler on model
14/01/2012 05:42:09 : WARN  : Failed to run assembler on model
14/01/2012 05:42:37 : WARN  : Failed to run assembler on model
14/01/2012 05:43:01 : WARN  : Failed to run assembler on model
14/01/2012 05:43:29 : WARN  : Failed to run assembler on model
14/01/2012 05:43:43 : WARN  : Failed to run assembler on model
14/01/2012 05:44:56 : WARN  : Failed to run assembler on model
14/01/2012 05:45:00 : INFO  : Run end  : Sat Jan 14 05:45:00 GMT 2012
